chr_1	start_1	end_1	type_1	name_1	subtype_1	ensembl_id_1	strand_properness_1	count_2	chr_2	start_2	end_2	type_2	name_2	subtype_2	ensembl_id_2	strand_properness_2	count_2	read_pair_count	ln_p_value
chr8	13417000	13417080	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr4	102762074	102762164	protein_coding	Wdr78	intron	ENSMUSG00000035126	NonProperStrand	2	1	-13.8986
chrX	166410142	166410232	protein_coding	Mid1	intron	ENSMUSG00000035299	ProperStrand	209	chr18	35714145	35714225	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-1.3723
chr14	71295884	71301302	protein_coding	Gfra2	exon	ENSMUSG00000022103	ProperStrand	26	chr18	33954827	33954857	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-5.1001
chrX	148704945	148705045	protein_coding	Kdm5c	exon	ENSMUSG00000025332	ProperStrand	139	chr9	64659390	64659413	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-7.2512
chr15	18196008	18196088	LINE	L1_Mus4	L1	chr15L1_Mus418195953	NonProperStrand	1	chr15	18195888	18195978	LTR	ORR1A2-int	MaLR	chr15ORR1A2-int18195367	NonProperStrand	1	1	-inf
chr5	36383741	36383760	protein_coding	Sorcs2	intron	ENSMUSG00000029093	ProperStrand	21	chr17	35089181	35089219	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-7.5760
chr17	25862309	25862342	protein_coding	Chtf18	intron	ENSMUSG00000019214	ProperStrand	38	chr11	62416593	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	3	-13.9930
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr2	97429082	97429098	protein_coding	Lrrc4c	intron	ENSMUSG00000050587	ProperStrand	9	1	-11.6738
chr12	110888795	110888895	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr19	12086467	12086496	tRNA	tRNA109-ValTAC	.	444028	ProperStrand	96	1	-7.7276
chr1	63225577	63225642	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	chr2	166890504	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-1.4456
chr12	35417214	35417294	LINE	Lx8	L1	chr12Lx835416460	ProperStrand	1	chr9	73698129	73698219	protein_coding	Unc13c	intron	ENSMUSG00000062151	NonProperStrand	5	1	-inf
chr18	36177775	36177877	protein_coding	Nrg2	exon	ENSMUSG00000060275	ProperStrand	16	chr7	118219574	118219610	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-6.7705
chr2	25055652	25055742	protein_coding	Cobra1	utr3	ENSMUSG00000013465	ProperStrand	17	chr9	15118246	15118283	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-5.9029
chrX	98513678	98513694	protein_coding	Nlgn3	exon	ENSMUSG00000031302	NonProperStrand	6	chr18	35716734	35716824	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-6.6008
chrX	20224802	20224847	protein_coding	Rbm10	exon	ENSMUSG00000031060	ProperStrand	31	chr16	23110542	23110585	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.6461
chr3	153573527	153573571	snoRNA	ENSMUSG00000064731_Snord45b	.	ENSMUSG00000064731	ProperStrand	205	chr8	73419683	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-2.2479
chr12	109437731	109437791	protein_coding	Ccnk	intron	ENSMUSG00000021258	ProperStrand	31	chr3	123210853	123210907	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-8.1784
chr11	79870027	79870048	protein_coding	Crlf3	exon	ENSMUSG00000017561	ProperStrand	47	chr10	110918552	110918642	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	4	-12.7962
chr16	96268492	96268558	protein_coding	Brwd1	intron	ENSMUSG00000022914	ProperStrand	77	chr4	118933103	118933119	protein_coding	Cldn19	utr3	ENSMUSG00000066058	NonProperStrand	4	2	-21.0541
chr7	133632695	133632742	protein_coding	Tufm	exon	ENSMUSG00000073838	ProperStrand	28	chr17	24857717	24857807	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-6.2280
chr11	71976256	71976290	protein_coding	4933427D14Rik	intron	ENSMUSG00000020807	ProperStrand	13	chr18	35716833	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.9970
chr4	46188254	46196056	protein_coding	Xpa	exon	ENSMUSG00000028329	ProperStrand	1	chr16	23111767	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-inf
chr12	5470877	5470894	LTR	MLT1B	MaLR	chr12MLT1B5470673	ProperStrand	2	chr8	18932988	18933004	snoRNA	ENSMUSG00000088420_SNORA70	.	ENSMUSG00000088420	ProperStrand	12	1	-inf
chr12	81585343	81585396	protein_coding	Exd2	intron	ENSMUSG00000032705	ProperStrand	7	chr9	15119646	15119736	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-16.1178
chr5	112758435	112758451	protein_coding	Tfip11	exon	ENSMUSG00000029345	ProperStrand	111	chr8	13416897	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-5.2485
chr4	154931299	154931369	protein_coding	Gnb1	exon	ENSMUSG00000029064	ProperStrand	69	chr16	23111453	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-3.4008
chr5	77755078	77755178	protein_coding	Polr2b	exon	ENSMUSG00000029250	ProperStrand	68	chr7	134671425	134671491	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	5	-19.5659
chr1	71632461	71632515	protein_coding	Fn1	utr3	ENSMUSG00000026193	ProperStrand	931	chr9	21602970	21602986	protein_coding	Kank2	utr5	ENSMUSG00000032194	ProperStrand	196	1	-5.4969
chr5	121892252	121892273	protein_coding	Naa25	utr3	ENSMUSG00000042719	ProperStrand	95	chr7	118219575	118219626	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-5.6704
chr4	137754107	137757838	protein_coding	Eif4g3	exon	ENSMUSG00000028760	ProperStrand	42	chr6	30162058	30162074	protein_coding	Ube2h	utr3	ENSMUSG00000039159	ProperStrand	96	1	-13.0890
chr10	127926567	127926620	protein_coding	Smarcc2	utr3	ENSMUSG00000025369	ProperStrand	16	chr2	157119950	157120991	protein_coding	Rpn2	exon	ENSMUSG00000027642	ProperStrand	363	1	-12.3922
chr11	52174728	52202171	protein_coding	Vdac1	utr3	ENSMUSG00000020402	ProperStrand	107	chr5	130295414	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	3	-10.0080
chr6	117873916	117874402	protein_coding	Hnrnpf	exon	ENSMUSG00000042079	ProperStrand	147	chr4	131866148	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	5	-10.1952
chr1	95696080	95696105	protein_coding	Dtymk	intron	ENSMUSG00000026281	ProperStrand	34	chr12	112779226	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	2	-9.6068
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr17	39985545	39985617	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-1.8130
chr7	133940256	133940372	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	chr4	116826917	116826969	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	1	-5.4290
chr2	146070596	146070624	protein_coding	Ralgapa2	utr3	ENSMUSG00000037110	ProperStrand	35	chr7	117189957	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	6	-inf
chr1	44083888	44083978	LINE	L1MC1	L1	chr1L1MC144083813	ProperStrand	1	chr1	44083625	44083705	LTR	MTE2a	MaLR	chr1MTE2a44083576	ProperStrand	1	1	-inf
chr16	15624664	15624686	protein_coding	Mcm4	utr3	ENSMUSG00000022673	ProperStrand	51	chr4	131908356	131908456	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.6592
chr15	81535255	81535355	protein_coding	Rangap1	utr3	ENSMUSG00000022391	ProperStrand	69	chr7	29136624	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.1324
chr5	54389950	54389967	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-5.6830
chr2	130103751	130103808	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	chr5	74489597	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	4	-2.0870
chr3	88579237	88579314	pseudogene	5830417I10Rik	.	ENSMUSG00000078684	ProperStrand	68	chr7	29136618	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.1563
chr4	131908687	131908729	lincRNA	Gm17300	intron	ENSMUSG00000091021	ProperStrand	109	chr11	8455850	8455887	protein_coding	Tns3	intron	ENSMUSG00000020422	NonProperStrand	24	1	-13.9684
chr11	106642997	106643082	protein_coding	Ddx5	utr3	ENSMUSG00000020719	ProperStrand	181	chr12	112779190	112779280	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-2.7362
chr11	6519840	6519930	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	chr12	110874224	110874291	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	10	-inf
chr9	64022665	64022683	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	chr1	92689614	92689630	protein_coding	Col6a3	exon	ENSMUSG00000048126	ProperStrand	79	1	-8.1291
chr8	37645812	37645854	protein_coding	Dlc1	exon	ENSMUSG00000031523	ProperStrand	89	chr16	23111373	23111463	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.7670
chr16	80223364	80223383	LTR	RLTR26	ERVK	chr16RLTR2680223216	NonProperStrand	1	chr19	42498870	42498929	protein_coding	Crtac1	intron	ENSMUSG00000042401	ProperStrand	26	1	-inf
chr10	77639875	77640504	protein_coding	Pwp2	exon	ENSMUSG00000032834	NonProperStrand	8	chr4	131865855	131865907	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-9.1913
chr6	35155331	35155421	protein_coding	Nup205	exon	ENSMUSG00000038759	ProperStrand	56	chr16	23111728	23111808	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.0136
chr2	92440278	92440296	protein_coding	Chst1	utr5	ENSMUSG00000027221	ProperStrand	17	chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	1	-11.8343
chr7	29116546	29123449	protein_coding	Supt5h	utr5	ENSMUSG00000003435	ProperStrand	123	chr6	125136459	125136549	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	1	-5.0376
chr18	10052128	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr7	85920351	85920432	protein_coding	Mrpl46	exon	ENSMUSG00000030612	ProperStrand	6	3	-18.9407
chr13	9833551	9833661	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr10	127473591	127483238	protein_coding	Naca	exon	ENSMUSG00000061315	ProperStrand	50	2	-8.7199
chr7	146326614	146326632	protein_coding	Stk32c	intron	ENSMUSG00000015981	NonProperStrand	2	chr12	110874223	110874290	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	1	-17.4298
chr1	158299338	158299357	protein_coding	9430070O13Rik	intron	ENSMUSG00000026601	ProperStrand	2	chr18	33954872	33954948	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-10.8123
chr4	43990733	43990786	protein_coding	Glipr2	utr3	ENSMUSG00000028480	ProperStrand	10	chr17	35089184	35089234	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	4	-18.8775
chr8	125626759	125628956	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	chr16	23111373	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	6	-2.1663
chr16	32243856	32243945	snoRNA	ENSMUSG00000080440_SNORA79	.	ENSMUSG00000080440	ProperStrand	140	chr1	89673542	89673622	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-1.8212
chr7	150644271	150644287	protein_coding	Cdkn1c	utr3	ENSMUSG00000037664	NonProperStrand	9	chr2	21136127	21136143	protein_coding	Thnsl1	utr3	ENSMUSG00000048550	ProperStrand	10	1	-19.2734
chr7	129164541	129164572	protein_coding	Gga2	exon	ENSMUSG00000030872	ProperStrand	65	chr10	23505151	23505247	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-3.5318
chr19	5798702	5798741	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr1	162967130	162967178	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	5	-13.4439
chr10	127787584	127788289	protein_coding	Cs	exon	ENSMUSG00000005683	ProperStrand	63	chr3	123210878	123210985	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.9875
chr5	65781999	65782017	protein_coding	Rpl9	exon	ENSMUSG00000047215	ProperStrand	113	chr7	116663640	116663759	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.5001
chr6	119028204	119028221	protein_coding	Cacna1c	intron	ENSMUSG00000051331	NonProperStrand	49	chr16	23111447	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.5489
chr10	19981680	19981763	protein_coding	Mtap7	exon	ENSMUSG00000019996	ProperStrand	43	chr10	23505152	23505195	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-3.1809
chr11	105838941	105838970	protein_coding	Ace	intron	ENSMUSG00000020681	ProperStrand	4	chr11	106113811	106113983	protein_coding	Ftsj3	exon	ENSMUSG00000020706	ProperStrand	64	1	-18.6464
chr6	6830063	6830082	protein_coding	Dlx5	intron	ENSMUSG00000029755	NonProperStrand	7	chr6	58624569	58624601	protein_coding	Abcg2	exon	ENSMUSG00000029802	ProperStrand	4	1	-inf
chrX	133275799	133275816	protein_coding	Morf4l2	utr5	ENSMUSG00000031422	ProperStrand	113	chr5	121655078	121655099	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.6089
chr10	128061658	128062354	protein_coding	Rps26	exon	ENSMUSG00000025362	ProperStrand	67	chr7	118219574	118219608	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-3.9624
chr11	61302763	61304264	protein_coding	Mapk7	exon	ENSMUSG00000001034	ProperStrand	10	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	7	-19.5957
chr12	4249584	4249644	protein_coding	Ncoa1	utr3	ENSMUSG00000020647	ProperStrand	38	chr19	8963087	8963130	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.0700
chr9	63170024	63170058	protein_coding	Map2k5	exon	ENSMUSG00000058444	ProperStrand	193	chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	1	-7.1589
chr4	129308531	129308857	protein_coding	Txlna	exon	ENSMUSG00000053841	ProperStrand	37	chr2	158185585	158185665	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-7.4489
chr7	31228153	31228225	protein_coding	Aplp1	exon	ENSMUSG00000006651	ProperStrand	29	chr7	25673322	25673353	protein_coding	Rps19	exon	ENSMUSG00000040952	ProperStrand	101	2	-inf
chr2	179909076	179909635	protein_coding	Adrm1	exon	ENSMUSG00000039041	ProperStrand	27	chr4	131908717	131908797	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.4692
chr13	43741337	43741357	protein_coding	Rnf182	intron	ENSMUSG00000044164	ProperStrand	4	chr1	162967491	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-8.9926
chr7	129223991	129224103	protein_coding	Ubfd1	utr3	ENSMUSG00000030870	ProperStrand	21	chr18	73693169	73693187	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	8	-20.7593
chr8	122070806	122070832	protein_coding	Mbtps1	intron	ENSMUSG00000031835	ProperStrand	81	chr14	33005146	33005236	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-3.4363
chr9	60719914	60719930	protein_coding	Uaca	exon	ENSMUSG00000034485	ProperStrand	109	chr1	162965531	162965588	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.2352
chr2	90235293	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	136457260	136457277	protein_coding	Kdm5b	intron	ENSMUSG00000042207	ProperStrand	223	1	-2.1076
chr13	76905518	76905608	protein_coding	Mctp1	intron	ENSMUSG00000021596	NonProperStrand	13	chr13	77362906	77362996	protein_coding	2210408I21Rik	intron	ENSMUSG00000071252	NonProperStrand	8	1	-19.3777
chr11	115451723	115451739	protein_coding	Gga3	exon	ENSMUSG00000020740	NonProperStrand	50	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-8.1043
chr11	62270322	62270339	protein_coding	Ncor1	intron	ENSMUSG00000018501	ProperStrand	132	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.4888
chr1	182499257	182531071	protein_coding	Parp1	exon	ENSMUSG00000026496	ProperStrand	227	chr7	116663634	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	11	-14.8992
chr5	53462872	53462889	protein_coding	Slc34a2	utr3	ENSMUSG00000029188	ProperStrand	4	chr17	35299510	35299610	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-10.3796
chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	chr17	23687227	23687251	tRNA	tRNA994-ArgCCG	.	1745771	ProperStrand	60	1	-10.0747
chr2	130103752	130103808	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	chr11	62418055	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-1.2945
chr14	76956323	76956339	protein_coding	Serp2	utr5	ENSMUSG00000052584	NonProperStrand	41	chr4	131908771	131908808	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.7814
chr16	57391633	57391677	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr11	69481379	69481479	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	NonProperStrand	24	1	-12.1607
chr2	179926824	179926920	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr14	56159295	56159312	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	4	-20.9185
chr9	103950068	103950086	protein_coding	Uba5	intron	ENSMUSG00000032557	ProperStrand	111	chr9	50816824	50816841	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	1	-10.5721
chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	chr12	60141444	60141506	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-5.2375
chr1	133074187	133074287	protein_coding	Rassf5	utr3	ENSMUSG00000026430	ProperStrand	73	chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	1	-8.5117
chr15	77593504	77597993	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr11	106362556	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	3	-7.7965
chr8	72862858	72862902	protein_coding	Upf1	exon	ENSMUSG00000058301	ProperStrand	90	chr16	23111374	23111464	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.7546
chr17	31477952	31483449	protein_coding	Slc37a1	exon	ENSMUSG00000024036	ProperStrand	17	chr4	131908689	131908739	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.3002
chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr7	31430801	31430946	protein_coding	Rbm42	exon	ENSMUSG00000036733	ProperStrand	9	2	-16.3560
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	132740930	132740984	protein_coding	Wasf2	exon	ENSMUSG00000028868	ProperStrand	56	1	-4.5948
chr9	100966289	100966307	SINE	B4A	B4	chr9B4A100966214	ProperStrand	51	chr11	77995189	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-6.5042
chr12	101369004	101369104	protein_coding	BC002230	exon	ENSMUSG00000021179	ProperStrand	37	chr7	4745111	4745150	protein_coding	Rpl28	exon	ENSMUSG00000030432	ProperStrand	220	1	-11.6833
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	57154472	57154489	protein_coding	Epb4.1l4b	intron	ENSMUSG00000028434	NonProperStrand	54	1	-4.6647
chr15	85701982	85704120	protein_coding	Gtse1	exon	ENSMUSG00000022385	ProperStrand	74	chr3	30933444	30936822	protein_coding	Prkci	exon	ENSMUSG00000037643	ProperStrand	39	1	-13.7575
chr11	115813296	115813317	protein_coding	Sap30bp	exon	ENSMUSG00000020755	ProperStrand	15	chr7	104866868	104866947	protein_coding	Clns1a	utr3	ENSMUSG00000025439	ProperStrand	16	2	-inf
chr7	54110589	54110689	protein_coding	Ldha	utr3	ENSMUSG00000063229	ProperStrand	280	chr9	15118323	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	4	-4.6101
chr1	133252361	133252451	protein_coding	Srgap2	intron	ENSMUSG00000026425	ProperStrand	299	chr7	116664794	116664874	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-0.9055
chr7	135381777	135381795	protein_coding	Armc5	exon	ENSMUSG00000042178	NonProperStrand	2	chr4	131865855	131865977	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-8.7800
chr1	129573197	129573277	protein_coding	Tmem163	intron	ENSMUSG00000026347	ProperStrand	7	chr1	129653688	129653778	protein_coding	Acmsd	intron	ENSMUSG00000026348	NonProperStrand	2	1	-inf
chr19	6299865	6299917	protein_coding	Ehd1	utr3	ENSMUSG00000024772	ProperStrand	30	chr2	4974190	4974207	protein_coding	Optn	exon	ENSMUSG00000026672	ProperStrand	451	1	-10.6731
chr10	82654023	82654095	protein_coding	Chst11	exon	ENSMUSG00000034612	ProperStrand	170	chr7	117189898	117189988	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-1.5836
chr18	18972292	18972310	LINE	Lx3A	L1	chr18Lx3A18971758	NonProperStrand	4	chr1	187210991	187218344	protein_coding	Eprs	exon	ENSMUSG00000026615	ProperStrand	149	1	-17.1714
chr2	158205380	158205405	snoRNA	ENSMUSG00000064585_SNORA71	.	ENSMUSG00000064585	ProperStrand	418	chr9	120037910	120037970	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-1.3465
chr8	86523001	86523091	protein_coding	Samd1	exon	ENSMUSG00000079003	ProperStrand	20	chr8	13876100	13876180	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-9.3574
chr10	79499012	79499337	protein_coding	Polr2e	utr3	ENSMUSG00000004667	ProperStrand	37	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-8.1645
chr14	45949538	45949554	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	chr15	5068407	5068443	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-2.8718
chr19	12543803	12543912	protein_coding	Dtx4	utr3	ENSMUSG00000039982	ProperStrand	4	chr17	35087894	35087946	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-10.8192
chr3	65760779	65761879	protein_coding	Ccnl1	exon	ENSMUSG00000027829	ProperStrand	29	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	13	-22.7785
chr9	21808974	21811002	protein_coding	Prkcsh	exon	ENSMUSG00000003402	ProperStrand	58	chr5	151755616	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	5	-inf
chr12	88778631	88778731	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	chr8	13876175	13876226	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-1.0450
chr17	57383677	57383759	protein_coding	Gpr108	exon	ENSMUSG00000005823	ProperStrand	15	chr10	110918558	110918648	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-6.1363
chr16	91657971	91666374	protein_coding	Son	exon	ENSMUSG00000022961	ProperStrand	59	chr8	73419655	73419745	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-5.4384
chr19	5099925	5100025	protein_coding	Rab1b	utr3	ENSMUSG00000024870	ProperStrand	133	chr1	155287317	155287355	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	1	-7.3910
chr15	98481994	98482029	protein_coding	Ddx23	exon	ENSMUSG00000003360	ProperStrand	63	chr2	83693562	83693578	protein_coding	Fam171b	exon	ENSMUSG00000048388	NonProperStrand	175	1	-11.0672
chr6	39348434	39354680	protein_coding	Mkrn1	exon	ENSMUSG00000029922	ProperStrand	177	chr16	23111373	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	19	-20.5286
chr18	41356147	41356185	miRNA	Mir5097	dead	ENSMUSG00000093361	ProperStrand	221	chr4	132617603	132617703	protein_coding	Ahdc1	exon	ENSMUSG00000037692	ProperStrand	100	4	-inf
chr12	112214926	112215026	protein_coding	Ankrd9	exon	ENSMUSG00000037904	ProperStrand	46	chr4	131908689	131908771	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-4.6663
chr13	34436854	34436870	protein_coding	Slc22a23	utr5	ENSMUSG00000038267	ProperStrand	95	chr11	69481331	69481423	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-2.3951
chr3	79223176	79223193	protein_coding	Gm17359	intron	ENSMUSG00000091685	NonProperStrand	50	chr19	8963027	8963082	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.5849
chr12	106855289	106855306	protein_coding	Atg2b	exon	ENSMUSG00000041341	ProperStrand	67	chr2	26494763	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.9099
chr2	3342670	3342686	protein_coding	Dclre1c	utr5	ENSMUSG00000026648	ProperStrand	8	chr2	26494708	26494761	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-7.0621
chr19	29678580	29678596	protein_coding	C030046E11Rik	exon	ENSMUSG00000038658	ProperStrand	104	chr7	116664793	116664870	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.6557
chr2	29852002	29870103	protein_coding	Spna2	intron	ENSMUSG00000057738	ProperStrand	222	chr18	35714144	35714235	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-2.4567
chrX	132674612	132674633	protein_coding	Bex4	exon	ENSMUSG00000047844	ProperStrand	13	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.3283
chr19	37062485	37062575	protein_coding	Btaf1	exon	ENSMUSG00000040565	NonProperStrand	9	chr10	23505152	23505220	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	NonProperStrand	45	1	-17.6641
chr1	63225262	63225338	protein_coding	Eef1b2	intron	ENSMUSG00000025967	ProperStrand	106	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-6.6093
chr6	89279758	89280342	protein_coding	Plxna1	exon	ENSMUSG00000030084	ProperStrand	233	chr9	15119297	15119397	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-2.5988
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr10	5992232	5992313	protein_coding	Akap12	exon	ENSMUSG00000038587	ProperStrand	1008	3	-7.3845
chr4	8769991	8770009	protein_coding	Chd7	intron	ENSMUSG00000041235	NonProperStrand	45	chr16	23111449	23111503	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.6772
chr2	112202959	112202975	protein_coding	Slc12a6	utr3	ENSMUSG00000027130	NonProperStrand	72	chr2	26493420	26493476	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-3.4060
chr2	32818851	32818932	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	chr3	88497875	88497965	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	5	-4.6089
chr2	4974190	4974207	protein_coding	Optn	exon	ENSMUSG00000026672	ProperStrand	451	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-0.9082
chr2	90235315	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	91869060	91869076	protein_coding	4930590J08Rik	exon	ENSMUSG00000034063	ProperStrand	1	1	-inf
chr5	64726581	64741085	protein_coding	Tbc1d1	exon	ENSMUSG00000029174	ProperStrand	44	chr16	23111692	23111783	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-4.2851
chr11	88874836	88876901	protein_coding	Trim25	exon	ENSMUSG00000000275	ProperStrand	50	chr17	35088957	35088984	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-6.2272
chr10	80541234	80541305	protein_coding	Thop1	exon	ENSMUSG00000004929	ProperStrand	20	chr1	194571765	194571855	snRNA	ENSMUSG00000064881_U5	.	ENSMUSG00000064881	ProperStrand	187	1	-13.2647
chr10	62122091	62122158	protein_coding	Stox1	utr3	ENSMUSG00000036923	ProperStrand	1	chr10	110918617	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-inf
chr17	39979945	39980014	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr2	22444545	22444613	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	4	-7.6826
chr2	164650674	164650774	protein_coding	Zswim1	exon	ENSMUSG00000017764	ProperStrand	68	chr9	15120002	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-7.0042
chr19	30105080	30105100	protein_coding	Uhrf2	utr5	ENSMUSG00000024817	ProperStrand	40	chr6	83318070	83318086	protein_coding	Tet3	exon	ENSMUSG00000034832	NonProperStrand	93	1	-13.2518
chr9	110845753	110848360	protein_coding	Tdgf1	exon	ENSMUSG00000032494	ProperStrand	218	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	5	-6.9408
chrX	136379815	136379836	protein_coding	Morc4	intron	ENSMUSG00000031434	NonProperStrand	3	chr7	118219575	118219634	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-10.4323
chr8	46110381	46110471	protein_coding	Fat1	exon	ENSMUSG00000070047	ProperStrand	306	chr11	69483146	69483226	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	5	-3.1944
chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	chr12	88778700	88778766	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-2.6323
chr9	21410877	21410967	SINE	B1_Mur4	Alu	chr9B1_Mur421410863	NonProperStrand	1	chr9	21410701	21410781	SINE	RSINE1	B4	chr9RSINE121410653	ProperStrand	1	1	-inf
chr5	135096891	135096943	protein_coding	Eif4h	utr3	ENSMUSG00000040731	ProperStrand	46	chr9	15118332	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	3	-9.6912
chr19	54119862	54119878	protein_coding	Adra2a	utr5	ENSMUSG00000033717	ProperStrand	4	chr5	108336427	108336491	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-10.4876
chr7	123280424	123280524	protein_coding	Plekha7	intron	ENSMUSG00000045659	ProperStrand	66	chr6	115757991	115758060	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-5.2861
chr17	26788141	26788201	protein_coding	Ergic1	intron	ENSMUSG00000001576	ProperStrand	114	chr16	23111701	23111776	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	5	-6.2003
chr18	35102297	35102367	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	chr1	59761158	59761180	snoRNA	ENSMUSG00000089512_SNORD11	.	ENSMUSG00000089512	ProperStrand	43	1	-7.2529
chr17	86535873	86538436	protein_coding	Srbd1	exon	ENSMUSG00000024135	ProperStrand	16	chrX	34622906	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-5.7063
chr2	132075527	132075616	protein_coding	Pcna	exon	ENSMUSG00000027342	ProperStrand	25	chr15	98350146	98350179	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	3	-14.9016
chr9	30235085	30235101	protein_coding	Snx19	exon	ENSMUSG00000031993	ProperStrand	353	chr12	17552964	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	3	-5.2515
chr12	92094533	92094553	lincRNA	4930544I03Rik	intron	ENSMUSG00000092100	ProperStrand	6	chr4	131908253	131908343	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-5.6461
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr4	122968596	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	7	-6.6703
chr11	96721909	96721926	protein_coding	Copz2	intron	ENSMUSG00000018672	ProperStrand	11	chr1	162966813	162966849	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-9.6957
chr12	19723413	19723431	LTR	MURVY-int	ERV1	chr12MURVY-int19718193	NonProperStrand	8	chr4	131908804	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.7736
chr2	70927900	70927917	protein_coding	Dcaf17	exon	ENSMUSG00000041966	NonProperStrand	89	chr15	77356785	77356801	protein_coding	Apol7c	exon	ENSMUSG00000044309	ProperStrand	197	1	-10.1365
chr14	35157799	35157879	protein_coding	Glud1	utr3	ENSMUSG00000021794	ProperStrand	72	chr15	79367445	79367911	protein_coding	Ddx17	exon	ENSMUSG00000055065	ProperStrand	140	1	-11.2458
chr5	88010995	88011012	protein_coding	Sult1e1	exon	ENSMUSG00000029272	ProperStrand	7	chr9	15119646	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	6	-22.0309
chr3	88684243	88684322	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chrX	93136011	93136027	protein_coding	Las1l	exon	ENSMUSG00000057421	ProperStrand	248	1	-4.4635
chrX	126793750	126824452	protein_coding	Diap2	exon	ENSMUSG00000034480	ProperStrand	34	chr10	90581059	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	23	-18.9130
chr14	32912578	32912668	protein_coding	Oxnad1	exon	ENSMUSG00000021906	ProperStrand	11	chr4	131908356	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.3989
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr7	29136526	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	5	-1.1563
chrX	155825375	155825432	protein_coding	Eif1ax	utr3	ENSMUSG00000067194	ProperStrand	18	chr9	15119630	15119709	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.8766
chr19	10823569	10823587	protein_coding	A430093F15Rik	intron	ENSMUSG00000067577	NonProperStrand	34	chr11	62416950	62417028	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-7.1717
chr6	115581306	115582936	protein_coding	Raf1	exon	ENSMUSG00000000441	ProperStrand	30	chr2	69982864	69982886	protein_coding	Myo3b	intron	ENSMUSG00000042064	NonProperStrand	16	1	-17.4052
chr9	72589490	72590498	protein_coding	Nedd4	exon	ENSMUSG00000032216	ProperStrand	308	chr5	147646765	147646848	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	13	-23.0634
chrX	70237450	70237471	miRNA	Mir2137	.	ENSMUSG00000089357	ProperStrand	50	chr1	138178661	138178677	protein_coding	Camsap2	exon	ENSMUSG00000041570	NonProperStrand	116	1	-12.3566
chr4	117531744	117531834	processed_transcript	Gm17114	.	ENSMUSG00000091237	ProperStrand	2	chr4	117530327	117530417	protein_coding	Slc6a9	intron	ENSMUSG00000028542	ProperStrand	6	1	-inf
chr9	106091159	106091177	protein_coding	Wdr82	utr3	ENSMUSG00000020257	ProperStrand	34	chr17	6233447	6233508	protein_coding	Tulp4	exon	ENSMUSG00000034377	ProperStrand	164	1	-12.4428
chr8	86453414	86453473	protein_coding	Lphn1	exon	ENSMUSG00000013033	ProperStrand	221	chr2	26494740	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	3	-3.3090
chr4	76614453	76614470	protein_coding	Ptprd	intron	ENSMUSG00000028399	ProperStrand	198	chr8	129468746	129468798	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-2.2605
chr2	118873199	118873270	protein_coding	Casc5	utr5	ENSMUSG00000027326	ProperStrand	30	chr3	66790039	66790055	protein_coding	Rsrc1	utr5	ENSMUSG00000034544	NonProperStrand	71	1	-14.3798
chr2	38434378	38434432	protein_coding	Nek6	intron	ENSMUSG00000026749	ProperStrand	10	chr9	99483993	99484009	protein_coding	Dbr1	exon	ENSMUSG00000032469	ProperStrand	162	1	-14.9972
chr4	141094179	141094195	protein_coding	Spen	utr5	ENSMUSG00000040761	ProperStrand	161	chr11	93747665	93747715	protein_coding	Mbtd1	utr5	ENSMUSG00000059474	ProperStrand	36	1	-12.3645
chr11	106101408	106102875	protein_coding	Ddx42	exon	ENSMUSG00000020705	ProperStrand	26	chr19	8798484	8798550	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-6.8655
chr5	72551679	72551747	protein_coding	Commd8	intron	ENSMUSG00000029213	ProperStrand	2	chr11	62416602	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-12.5746
chr2	129998655	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr6	38461895	38461912	protein_coding	Ubn2	utr3	ENSMUSG00000038538	ProperStrand	86	1	-7.3914
chr4	129784860	129784880	protein_coding	Pef1	utr5	ENSMUSG00000028779	ProperStrand	16	chr8	13876097	13876226	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	7	-19.5142
chr15	77597977	77597993	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chrX	84483704	84483730	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-3.8615
chr8	129468764	129468864	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	chr4	41158543	41158564	snoRNA	ENSMUSG00000089308_SNORD121A	.	ENSMUSG00000089308	ProperStrand	209	1	-2.1713
chr3	153575089	153575114	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	chr8	13952286	13952381	protein_coding	2610019F03Rik	utr3	ENSMUSG00000050052	ProperStrand	4	1	-14.1706
chr18	6211217	6212581	protein_coding	Kif5b	exon	ENSMUSG00000006740	ProperStrand	65	chr16	23110536	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.3262
chr2	59629923	59631176	protein_coding	Tanc1	exon	ENSMUSG00000035168	ProperStrand	80	chr1	39605591	39605634	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-6.7723
chr2	159260469	159260559	SINE	B4	B4	chr2B4159260440	NonProperStrand	1	chr3	99031295	99031385	protein_coding	Wars2	intron	ENSMUSG00000004233	ProperStrand	2	1	-inf
chr9	61761158	61761197	protein_coding	Rplp1	exon	ENSMUSG00000007892	ProperStrand	116	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-5.6260
chr12	33537457	33537515	protein_coding	Nampt	utr3	ENSMUSG00000020572	ProperStrand	15	chr12	112779192	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	2	-12.1508
chr8	74008400	74008417	protein_coding	Ano8	exon	ENSMUSG00000034863	NonProperStrand	171	chr5	121655016	121655098	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	3	-5.3185
chr11	51420200	51420275	protein_coding	Hnrnpab	utr5	ENSMUSG00000020358	ProperStrand	124	chr11	97642955	97643045	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.3336
chr12	77681715	77681731	protein_coding	Spnb1	utr3	ENSMUSG00000021061	NonProperStrand	37	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.5639
chr10	80107382	80107429	protein_coding	Btbd2	exon	ENSMUSG00000003344	ProperStrand	68	chr4	122970392	122970482	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	3	-16.1681
chr2	120410875	120410975	protein_coding	Snap23	intron	ENSMUSG00000027287	ProperStrand	2	chr7	117189955	117190014	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-10.6222
chr5	120936119	120936153	protein_coding	Plbd2	exon	ENSMUSG00000029598	ProperStrand	22	chr11	69483136	69483229	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.2846
chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr13	51743567	51743658	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	5	-8.8710
chr7	17396989	17397005	protein_coding	Fkrp	exon	ENSMUSG00000048920	NonProperStrand	2	chr4	131865859	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-8.7800
chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	chr7	88674800	88674867	snoRNA	ENSMUSG00000093107_AC167122.1	.	ENSMUSG00000093107	ProperStrand	110	1	-2.5211
chr13	106235953	106235970	protein_coding	Htr1a	utr3	ENSMUSG00000021721	ProperStrand	8	chr7	29136525	29136599	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-6.2203
chr16	11144178	11144278	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr14	31827478	31827541	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	NonProperStrand	3	3	-inf
chr17	46395542	46395679	protein_coding	Tjap1	exon	ENSMUSG00000012296	ProperStrand	11	chr4	109125715	109125732	protein_coding	Rnf11	utr3	ENSMUSG00000028557	ProperStrand	9	1	-19.9764
chr2	6518908	6518927	protein_coding	Celf2	intron	ENSMUSG00000002107	ProperStrand	19	chr16	23110893	23110960	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7016
chr11	62418011	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	chr15	5068426	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	6	-2.7699
chr14	51463983	51463999	protein_coding	Tep1	exon	ENSMUSG00000006281	NonProperStrand	73	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-6.8135
chr15	81513031	81513413	protein_coding	L3mbtl2	exon	ENSMUSG00000022394	ProperStrand	19	chr4	155499766	155499866	protein_coding	9430015G10Rik	utr3	ENSMUSG00000059939	ProperStrand	17	1	-18.1647
chr13	81889546	81889565	protein_coding	Mblac2	utr3	ENSMUSG00000051098	ProperStrand	6	chr4	138953395	138955719	protein_coding	Ubr4	exon	ENSMUSG00000066036	ProperStrand	304	5	-19.2498
chr12	82572661	82572685	protein_coding	Gm20498	utr3	ENSMUSG00000021139	ProperStrand	5	chr10	23505152	23505238	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-5.7809
chr5	110587914	110587931	lincRNA	Gm15787	intron	ENSMUSG00000086247	ProperStrand	5	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-8.6129
chr10	106266059	106266075	protein_coding	Ppfia2	exon	ENSMUSG00000053825	ProperStrand	20	chr13	51298304	51298338	protein_coding	Hist1h2al	exon	ENSMUSG00000091383	ProperStrand	1	1	-inf
chr17	66236386	66236414	DNA	URR1B	MER1_type	chr17URR1B66236227	NonProperStrand	1	chr11	6428065	6428155	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-inf
chr11	49696655	49696755	protein_coding	Mapk9	utr3	ENSMUSG00000020366	ProperStrand	20	chr4	131908753	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.0012
chr12	17554098	17554116	protein_coding	Odc1	utr5	ENSMUSG00000011179	ProperStrand	173	chr1	135029830	135029934	protein_coding	Ppp1r15b	exon	ENSMUSG00000046062	ProperStrand	46	6	-inf
chr2	130103449	130103505	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	chr7	118219575	118219627	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	3	-1.3315
chr7	106535125	106535143	protein_coding	Gdpd5	intron	ENSMUSG00000035314	NonProperStrand	14	chr11	106362304	106362324	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-8.7702
chr19	42057079	42057097	protein_coding	Ubtd1	intron	ENSMUSG00000025171	NonProperStrand	9	chr16	23110465	23110491	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-6.0870
chr14	76918394	76918484	lincRNA	4930444M15Rik	intron	ENSMUSG00000085974	NonProperStrand	14	chr5	130300458	130300553	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	4	-16.7285
chr15	75889568	75889617	protein_coding	Scrib	exon	ENSMUSG00000022568	ProperStrand	154	chr15	82688175	82688193	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	1	-6.6478
chr4	131908688	131908725	lincRNA	Gm17300	intron	ENSMUSG00000091021	ProperStrand	109	chr5	108334236	108334326	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	NonProperStrand	17	1	-14.6772
chr7	72457688	72457778	protein_coding	Tjp1	exon	ENSMUSG00000030516	ProperStrand	78	chr18	33954828	33954908	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	4	-10.4387
chr15	34202101	34202166	protein_coding	Laptm4b	exon	ENSMUSG00000022257	ProperStrand	24	chr11	116938620	116938710	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-7.9908
chr17	57163349	57163503	protein_coding	Khsrp	exon	ENSMUSG00000007670	ProperStrand	353	chr18	33954881	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-0.7539
chr6	148794691	148794739	protein_coding	Caprin2	exon	ENSMUSG00000030309	ProperStrand	12	chr11	106362558	106362586	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	2	-16.8898
chr5	116011359	116012489	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	chr16	23110491	23111697	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-0.8695
chr19	26758143	26758223	protein_coding	Smarca2	intron	ENSMUSG00000024921	NonProperStrand	6	chr19	6007899	6007989	protein_coding	Capn1	intron	ENSMUSG00000024942	NonProperStrand	1	1	-inf
chr9	15130729	15130809	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	chr10	23506278	23506307	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-3.0358
chr6	83318070	83318086	protein_coding	Tet3	exon	ENSMUSG00000034832	NonProperStrand	93	chr5	145532326	145532374	protein_coding	Trrap	intron	ENSMUSG00000045482	ProperStrand	399	2	-13.7221
chr3	101408387	101408467	protein_coding	Atp1a1	utr5	ENSMUSG00000033161	ProperStrand	316	chr10	23506278	23506317	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	2	-6.3053
chr3	101387768	101388708	protein_coding	Atp1a1	exon	ENSMUSG00000033161	ProperStrand	316	chr11	62416955	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-2.9051
chr11	69403163	69403299	protein_coding	Trp53	exon	ENSMUSG00000059552	ProperStrand	47	chr16	23110551	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.8869
chr15	99543284	99543364	protein_coding	Smarcd1	utr3	ENSMUSG00000023018	ProperStrand	43	chr16	23110528	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.0458
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr8	104199443	104199460	LTR	ORR1D1	MaLR	chr8ORR1D1104199368	ProperStrand	1	1	-inf
chr7	133834344	133834369	protein_coding	Slx1b	utr3	ENSMUSG00000059772	ProperStrand	15	chr7	29136585	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-11.8931
chr4	154344275	154344634	protein_coding	Pank4	exon	ENSMUSG00000029056	ProperStrand	15	chr8	98269996	98270076	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-8.3205
chr14	35544699	35544789	protein_coding	Wapal	exon	ENSMUSG00000041408	ProperStrand	93	chr13	96100600	96100680	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	1	-7.1949
chr3	82863253	82863775	protein_coding	Plrg1	exon	ENSMUSG00000027998	ProperStrand	16	chr7	116663685	116663767	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	4	-15.9313
chr10	126889808	126891706	protein_coding	R3hdm2	exon	ENSMUSG00000025404	ProperStrand	33	chr11	77995191	77995220	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-7.3726
chr14	122538946	122538979	protein_coding	Tm9sf2	exon	ENSMUSG00000025544	ProperStrand	12	chr3	157729109	157729125	protein_coding	Lrrc40	exon	ENSMUSG00000063052	NonProperStrand	26	1	-17.9842
chr19	44188403	44188483	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr10	80640902	80641438	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	12	-19.0665
chr3	108218372	108218390	protein_coding	Celsr2	exon	ENSMUSG00000068740	NonProperStrand	20	chr16	23111777	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-6.5355
chr9	63042015	63042031	protein_coding	Map2k5	exon	ENSMUSG00000058444	ProperStrand	193	chr6	115758011	115758050	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-3.2622
chr13	73464875	73465844	protein_coding	Ndufs6	exon	ENSMUSG00000021606	ProperStrand	8	chr18	38487603	38487635	protein_coding	Gnpda1	utr3	ENSMUSG00000052102	ProperStrand	16	1	-19.1029
chr12	110889635	110889704	snoRNA	ENSMUSG00000064496_SNORD113	.	ENSMUSG00000064496	ProperStrand	37	chr18	33954897	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	3	-10.6453
chr14	79881517	79881559	protein_coding	Elf1	intron	ENSMUSG00000036461	ProperStrand	15	chr5	130295414	130295493	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-8.0200
chr1	66214559	66214577	LTR	MTC	MaLR	chr1MTC66214401	NonProperStrand	1	chr16	23111429	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-inf
chr10	63070812	63070829	protein_coding	Ctnna3	intron	ENSMUSG00000060843	ProperStrand	66	chr7	29136525	29136578	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.2056
chr2	155998745	155998789	protein_coding	Rbm39	utr5	ENSMUSG00000027620	ProperStrand	38	chr5	108334234	108334326	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-5.7109
chr2	91488175	91489133	protein_coding	Zfp408	exon	ENSMUSG00000075040	ProperStrand	4	chr14	76247769	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-9.7427
chr2	181577358	181577404	protein_coding	Pcmtd2	exon	ENSMUSG00000027589	ProperStrand	11	chr4	132530098	132530117	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	1	-13.0659
chr1	74818604	74818620	protein_coding	Wnt6	utr5	ENSMUSG00000033227	NonProperStrand	11	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-10.0333
chr12	82317769	82317785	protein_coding	Slc8a3	exon	ENSMUSG00000079055	ProperStrand	126	chr6	71832629	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-4.1826
chr2	5838836	5838865	protein_coding	Dhtkd1	exon	ENSMUSG00000025815	ProperStrand	46	chr9	15118332	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.9612
chr3	101560522	101560612	LTR	ORR1A0	MaLR	chr3ORR1A0101560272	ProperStrand	1	chr13	120253384	120253464	protein_coding	4833420G17Rik	intron	ENSMUSG00000062822	NonProperStrand	341	1	-inf
mmu-miR-1949	5	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr13	93291328	93291428	protein_coding	Zfyve16	exon	ENSMUSG00000021706	ProperStrand	14	4	-inf
chr11	97237838	97238311	protein_coding	Socs7	exon	ENSMUSG00000038485	NonProperStrand	3	chr16	32243887	32243942	snoRNA	ENSMUSG00000080440_SNORA79	.	ENSMUSG00000080440	ProperStrand	140	1	-18.0501
chr17	86671357	86671373	protein_coding	Prkce	intron	ENSMUSG00000045038	ProperStrand	19	chr4	131865866	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.7782
chr2	84454593	84454615	protein_coding	Ctnnd1	intron	ENSMUSG00000034101	ProperStrand	26	chr16	23111691	23111781	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-11.4878
chr19	8800358	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	chr12	92811916	92812010	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	6	-3.6529
chr18	50670703	50670722	LINE	Lx7	L1	chr18Lx750670544	NonProperStrand	2	chr2	126562095	126562159	protein_coding	Usp8	exon	ENSMUSG00000027363	ProperStrand	40	1	-inf
chr12	82047568	82047613	protein_coding	Srsf5	utr5	ENSMUSG00000021134	ProperStrand	68	chr11	4820972	4820990	protein_coding	Thoc5	intron	ENSMUSG00000034274	ProperStrand	325	1	-9.6765
chr17	95160908	95218243	protein_coding	2610044O15Rik	exon	ENSMUSG00000066057	NonProperStrand	70	chr4	116826700	116826723	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-6.4762
chr2	90235314	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	35216701	35216718	LINE	L1M4b	L1	chr7L1M4b35216550	ProperStrand	31	1	-5.7479
chr11	93315153	93315169	protein_coding	Car10	intron	ENSMUSG00000056158	ProperStrand	25	chr10	90432659	90432678	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	1	-12.3898
chr4	150674362	150674379	protein_coding	Camta1	intron	ENSMUSG00000014592	ProperStrand	170	chr7	116663632	116663679	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-0.9505
chr17	33892902	33892920	protein_coding	Rab11b	intron	ENSMUSG00000077450	ProperStrand	12	chr9	15119287	15119427	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	5	-inf
chr7	30026273	30026289	protein_coding	Yif1b	intron	ENSMUSG00000030588	ProperStrand	154	chr1	162968461	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-4.2557
chr17	45757645	45757675	snRNA	ENSMUSG00000065743_U6	.	ENSMUSG00000065743	ProperStrand	1	chr1	162965540	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-inf
chr17	27700448	27700548	protein_coding	Hmga1	utr3	ENSMUSG00000046711	ProperStrand	180	chr7	116663721	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-0.8820
chr18	73693109	73693138	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr13	51743581	51743649	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	5	-3.4138
chr1	164152781	164152802	antisense	Dnm3os	.	ENSMUSG00000078190	ProperStrand	1	chr4	131826025	131826124	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	NonProperStrand	4	1	-inf
chr8	13558670	13558772	protein_coding	1700029H14Rik	exon	ENSMUSG00000031452	ProperStrand	19	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-7.4992
chr2	146125208	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	chr2	4544718	4544734	protein_coding	Prpf18	utr3	ENSMUSG00000039449	NonProperStrand	66	1	-10.8736
chr5	115540023	115540119	protein_coding	Sppl3	intron	ENSMUSG00000029550	ProperStrand	33	chr16	23110530	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	4	-11.8936
chr11	62416575	62416598	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr8	3568023	3568039	protein_coding	C330021F23Rik	utr5	ENSMUSG00000065952	NonProperStrand	85	1	-8.2745
chr8	13416890	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr19	8800355	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	11	-2.0131
chr2	90235299	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr13	54564913	54564929	protein_coding	Thoc3	exon	ENSMUSG00000025872	ProperStrand	24	1	-6.2570
chr11	8485040	8485058	protein_coding	Tns3	intron	ENSMUSG00000020422	NonProperStrand	24	chrX	148362251	148362285	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	1	-10.9171
chr7	108977756	108977775	protein_coding	Inppl1	exon	ENSMUSG00000032737	ProperStrand	272	chr14	31827477	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-4.0133
chr11	62416575	62416598	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chrX	71517835	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	4	-8.8602
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr9	64023699	64023739	snoRNA	ENSMUSG00000064918_SNORD18	.	ENSMUSG00000064918	ProperStrand	370	1	-5.1986
chr7	28119903	28120447	protein_coding	Ltbp4	exon	ENSMUSG00000040488	ProperStrand	91	chr12	88778631	88778681	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-5.6782
chr16	18283302	18283319	protein_coding	Dgcr8	exon	ENSMUSG00000022718	ProperStrand	67	chr2	22444175	22444224	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-7.5563
chr1	169261158	169261174	protein_coding	Tmco1	utr3	ENSMUSG00000052428	NonProperStrand	1	chr2	130102052	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-inf
chr17	33961611	33966613	protein_coding	Ndufa7	exon	ENSMUSG00000041881	ProperStrand	64	chr8	129468858	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-4.2908
chr16	48288048	48289168	protein_coding	Dppa4	exon	ENSMUSG00000058550	ProperStrand	13	chr7	29136525	29136556	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.2243
chr7	75332108	75334542	protein_coding	Igf1r	exon	ENSMUSG00000005533	ProperStrand	121	chr18	33954867	33954947	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-2.2707
chr11	42440243	42440259	protein_coding	Gabrb2	exon	ENSMUSG00000007653	ProperStrand	248	chr5	116004873	116004943	protein_coding	Pxn	utr3	ENSMUSG00000029528	ProperStrand	171	1	-8.3720
chrX	17740226	17740244	protein_coding	Kdm6a	exon	ENSMUSG00000037369	ProperStrand	19	chr17	23685735	23685787	tRNA	tRNA995-ArgCCT	.	1729171	ProperStrand	18	1	-17.9854
chr10	26766750	26766771	protein_coding	Lama2	intron	ENSMUSG00000019899	NonProperStrand	36	chr14	57521730	57521755	protein_coding	Zmym2	exon	ENSMUSG00000021945	ProperStrand	9	1	-18.2601
chr11	57935874	57938469	protein_coding	Gemin5	exon	ENSMUSG00000037275	ProperStrand	33	chr3	121154350	121154802	protein_coding	Cnn3	exon	ENSMUSG00000053931	ProperStrand	77	4	-19.1779
chr2	90235308	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	26181911	26202421	protein_coding	Lipe	intron	ENSMUSG00000003123	NonProperStrand	63	1	-4.3696
chr11	14961829	14961849	LINE	Lx	L1	chr11Lx14961726	ProperStrand	93	chr15	5067363	5067679	protein_coding	Rpl37	exon	ENSMUSG00000041841	ProperStrand	69	1	-12.1518
chr17	27070133	27070149	protein_coding	Phf1	utr5	ENSMUSG00000024193	NonProperStrand	6	chr7	117191733	117192326	protein_coding	Ipo7	exon	ENSMUSG00000066232	ProperStrand	2121	1	-10.9406
chr2	75500471	75500540	protein_coding	Hnrnpa3	intron	ENSMUSG00000059005	ProperStrand	289	chr1	162965994	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-1.0545
chr2	90235321	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr14	27199812	27199828	antisense	4933413J09Rik	.	ENSMUSG00000021874	ProperStrand	51	1	-4.7748
chr2	151062181	151062271	LINE	L1Md_F2	L1	chr2L1Md_F2151060212	ProperStrand	2	chr2	164619022	164619112	protein_coding	Acot8	intron	ENSMUSG00000017307	ProperStrand	9	1	-inf
chr2	10156793	10160200	protein_coding	Itih5	exon	ENSMUSG00000025780	ProperStrand	15	chr11	6519871	6519944	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	2	-16.9879
chr4	108185529	108185545	protein_coding	Zcchc11	exon	ENSMUSG00000034610	ProperStrand	35	chr16	23110852	23110942	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.7567
chr9	15119649	15119708	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	chr5	31190514	31190546	tRNA	tRNA109-TyrGTA	.	1720406	ProperStrand	64	1	-2.5183
chr2	71926364	71926385	protein_coding	Rapgef4	intron	ENSMUSG00000049044	ProperStrand	5	chr7	116664815	116664905	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-7.4478
chr13	29042548	29042582	protein_coding	Sox4	utr3	ENSMUSG00000076431	ProperStrand	73	chrX	34622930	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-2.8213
chr8	95442580	95442598	protein_coding	Lpcat2	utr3	ENSMUSG00000033192	NonProperStrand	3	chr9	64022856	64022886	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-14.3863
chr11	60974882	60974962	protein_coding	Usp22	exon	ENSMUSG00000042506	ProperStrand	75	chr8	129468780	129468870	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-3.9912
chr16	18283302	18283319	protein_coding	Dgcr8	exon	ENSMUSG00000022718	ProperStrand	67	chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	1	-12.3443
chr17	81094751	81094770	protein_coding	Map4k3	intron	ENSMUSG00000024242	ProperStrand	7	chr11	69483136	69483187	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-6.6014
chr19	4802971	4802998	protein_coding	Rbm14	exon	ENSMUSG00000006456	ProperStrand	84	chr8	32260335	32260423	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-3.9910
chr15	81535338	81535438	protein_coding	Rangap1	utr3	ENSMUSG00000022391	ProperStrand	69	chr7	117166806	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	2	-7.5572
chr5	33950607	33950707	protein_coding	Fam53a	exon	ENSMUSG00000037339	ProperStrand	18	chr3	85942714	85942776	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	1	-12.1610
chr13	51798669	51820790	protein_coding	Sema4d	utr5	ENSMUSG00000021451	ProperStrand	42	chr16	23111448	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-7.0999
chr6	131330322	131330402	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	ProperStrand	408	chr5	108334243	108334333	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-1.4659
chr12	66662532	66662622	Other	RMER1A	Other	chr12RMER1A66661606	ProperStrand	1	chr12	66662675	66662755	Other	RMER1B	Other	chr12RMER1B66662590	ProperStrand	1	1	-inf
chr7	134170141	134170217	protein_coding	Maz	intron	ENSMUSG00000030678	ProperStrand	42	chr1	92689614	92689630	protein_coding	Col6a3	exon	ENSMUSG00000048126	ProperStrand	79	1	-13.4838
chr1	9817125	9817144	protein_coding	Sgk3	utr5	ENSMUSG00000025915	ProperStrand	6	chr9	120038616	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-7.6033
chr11	62236432	62236485	protein_coding	Ncor1	exon	ENSMUSG00000018501	ProperStrand	132	chr3	108357439	108357477	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	2	-5.2935
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr10	69629765	69652443	protein_coding	Ccdc6	exon	ENSMUSG00000048701	ProperStrand	72	6	-inf
chr4	140571312	140571412	protein_coding	Mfap2	intron	ENSMUSG00000060572	NonProperStrand	1	chr4	131865441	131865518	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-inf
chr7	52382808	52382869	protein_coding	Rpl13a	intron	ENSMUSG00000074129	ProperStrand	269	chr17	24343586	24343602	protein_coding	Ntn3	exon	ENSMUSG00000079662	ProperStrand	237	1	-7.5619
chr17	24665402	24665442	antisense	2610019E17Rik	.	ENSMUSG00000093565	ProperStrand	24	chr10	23505152	23505234	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.6868
chr4	155323671	155323724	protein_coding	Ube2j2	intron	ENSMUSG00000023286	ProperStrand	35	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.2191
chr14	121694008	121696442	protein_coding	Stk24	exon	ENSMUSG00000063410	ProperStrand	7	chr10	23505152	23505217	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-5.0629
chr17	30733387	30736984	protein_coding	Glo1	exon	ENSMUSG00000024026	ProperStrand	75	chr7	116663638	116663718	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.1374
chr16	22080365	22080384	protein_coding	Igf2bp2	intron	ENSMUSG00000033581	ProperStrand	23	chr4	131866154	131866188	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-5.5102
chr10	120288388	120288407	protein_coding	Msrb3	intron	ENSMUSG00000051236	ProperStrand	24	chr19	8798484	8798519	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-7.0265
chr1	87983864	87983936	protein_coding	Psmd1	intron	ENSMUSG00000026229	ProperStrand	664	chr1	87983952	87984003	snoRNA	ENSMUSG00000077274_SNORA26	.	ENSMUSG00000077274	ProperStrand	361	7	-20.9262
chr5	32988362	32988409	protein_coding	Yes1	utr3	ENSMUSG00000014932	ProperStrand	11	chr3	89072404	89072423	protein_coding	Slc50a1	utr3	ENSMUSG00000027953	ProperStrand	2	1	-inf
chr10	57763984	57764034	protein_coding	Gcc2	intron	ENSMUSG00000038039	ProperStrand	9	chr16	23110986	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.9939
chr12	11098613	11098629	protein_coding	Kcns3	exon	ENSMUSG00000043673	ProperStrand	19	chr9	15119631	15119694	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.7702
chr7	111488603	111488622	protein_coding	Trim12c	utr3	ENSMUSG00000057143	ProperStrand	28	chr12	17552948	17553030	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-6.5920
chr4	106873373	106873390	protein_coding	Tmem59	utr3	ENSMUSG00000028618	NonProperStrand	9	chr17	35087897	35087961	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-9.0335
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr6	97182531	97182565	protein_coding	Arl6ip5	exon	ENSMUSG00000035199	ProperStrand	4	2	-17.1104
chr13	21451141	21451158	LTR	RMER17D2	ERVK	chr13RMER17D221450992	NonProperStrand	1	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-inf
chr7	116663659	116663759	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	chr5	125884616	125884654	tRNA	tRNA1317-AlaTGC	.	1177497	ProperStrand	149	2	-2.1745
chr18	34444671	34444698	protein_coding	Apc	intron	ENSMUSG00000005871	ProperStrand	64	chr17	39985622	39985722	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-5.8053
chr1	133252344	133252403	protein_coding	Srgap2	intron	ENSMUSG00000026425	ProperStrand	299	chr11	106362320	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	2	-4.8954
chrX	148306139	148306168	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	chr4	116828379	116828424	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-4.2283
chr1	155287315	155287355	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	chr19	8963027	8963182	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	7	-2.2449
chr15	84085899	84085915	protein_coding	Parvb	intron	ENSMUSG00000022438	NonProperStrand	6	chr18	5103711	5105767	protein_coding	Svil	exon	ENSMUSG00000024236	ProperStrand	19	1	-19.0985
chrX	148274647	148354278	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	chr4	131908689	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	15	-3.8436
chr15	60662493	60662510	lincRNA	9930014A18Rik	exon	ENSMUSG00000044513	NonProperStrand	1	chr12	81310347	81310407	protein_coding	Actn1	exon	ENSMUSG00000015143	ProperStrand	128	1	-inf
chr11	78313939	78313956	protein_coding	Vtn	exon	ENSMUSG00000017344	ProperStrand	188	chr8	108632662	108632728	protein_coding	Nfatc3	exon	ENSMUSG00000031902	ProperStrand	75	1	-10.5736
chr15	97663162	97663179	protein_coding	Hdac7	intron	ENSMUSG00000022475	ProperStrand	7	chr19	8963026	8963051	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-6.3961
chr2	52807758	52807780	protein_coding	Fmnl2	intron	ENSMUSG00000036053	ProperStrand	35	chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	1	-9.1927
chr12	52792592	52792682	protein_coding	Strn3	utr5	ENSMUSG00000020954	ProperStrand	10	chr17	24857717	24857797	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-5.6778
chr5	65194941	65194981	protein_coding	Klf3	utr5	ENSMUSG00000029178	ProperStrand	56	chr19	8798740	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	4	-15.4199
chr13	91925131	91925148	protein_coding	Acot12	utr3	ENSMUSG00000021620	NonProperStrand	7	chr16	23110913	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-6.1472
chr2	32470605	32470705	protein_coding	St6galnac6	exon	ENSMUSG00000026811	ProperStrand	17	chr18	75161562	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-9.7503
chr16	89898171	89898219	protein_coding	Tiam1	exon	ENSMUSG00000002489	ProperStrand	80	chr4	131908687	131908787	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-4.2033
chr7	29686975	29689562	protein_coding	Actn4	exon	ENSMUSG00000054808	ProperStrand	120	chr1	162966830	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-4.9063
chr8	113683747	113684521	protein_coding	Glg1	exon	ENSMUSG00000003316	ProperStrand	83	chr16	23111772	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.4124
chr1	187189675	187189734	protein_coding	Eprs	intron	ENSMUSG00000026615	ProperStrand	149	chr9	24549540	24549563	protein_coding	Tbx20	intron	ENSMUSG00000031965	NonProperStrand	110	2	-16.1955
chr6	108612634	108612724	protein_coding	Bhlhe40	utr3	ENSMUSG00000030103	ProperStrand	11	chr16	23110893	23110973	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.6241
chr16	5256015	5256031	protein_coding	Fam86	utr5	ENSMUSG00000022544	ProperStrand	231	chr6	87415523	87415539	protein_coding	Arhgap25	exon	ENSMUSG00000030047	ProperStrand	7	1	-15.0422
chr12	114149462	114149478	protein_coding	Jag2	exon	ENSMUSG00000002799	ProperStrand	28	chr9	15119637	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.0206
chr2	119613016	119613032	protein_coding	Rpap1	utr5	ENSMUSG00000034032	ProperStrand	96	chr12	17552964	17553029	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-4.1888
chr8	59991434	59991450	protein_coding	Hmgb2	exon	ENSMUSG00000054717	NonProperStrand	96	chr2	121276494	121276536	protein_coding	Serf2	utr3	ENSMUSG00000074884	ProperStrand	22	1	-14.4045
chr14	105539022	105539097	protein_coding	Rbm26	intron	ENSMUSG00000022119	ProperStrand	60	chr4	131908719	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.2237
chr2	83693562	83693578	protein_coding	Fam171b	exon	ENSMUSG00000048388	NonProperStrand	175	chr2	26493367	26493421	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-1.8816
chr1	97919973	97919990	LINE	L1MC3	L1	chr1L1MC397919841	NonProperStrand	2	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-inf
chr4	116862615	116862662	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	chr12	81492617	81492707	snoRNA	ENSMUSG00000088158_Scarna3b	.	ENSMUSG00000088158	ProperStrand	147	2	-11.3408
chr4	129324162	129324189	protein_coding	Kpna6	utr3	ENSMUSG00000003731	ProperStrand	39	chr19	8798484	8798532	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	3	-13.9669
chr7	82896572	82896628	protein_coding	Akap13	utr3	ENSMUSG00000066406	ProperStrand	80	chr10	110918675	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	3	-7.5071
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-5.0915
chr7	16738215	16738289	protein_coding	Slc8a2	exon	ENSMUSG00000030376	ProperStrand	7	chr16	23110987	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-17.2005
chr10	75833587	75833626	protein_coding	Pcnt	intron	ENSMUSG00000001151	ProperStrand	127	chr11	96921526	96921543	protein_coding	Osbpl7	exon	ENSMUSG00000038534	ProperStrand	15	1	-14.6295
chr1	46651562	46651581	LTR	MTD	MaLR	chr1MTD46651531	ProperStrand	1	chr11	6428108	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-inf
chr7	31103883	31103963	protein_coding	AI428936	exon	ENSMUSG00000019737	ProperStrand	5	chr7	117189890	117189980	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-8.3295
chr15	41520021	41520039	protein_coding	Oxr1	intron	ENSMUSG00000022307	NonProperStrand	12	chr5	121655016	121655077	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-6.9120
chr7	82893408	82893508	protein_coding	Akap13	intron	ENSMUSG00000066406	ProperStrand	80	chr1	9932550	9932624	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	2	-11.4973
chr13	55733515	55733532	protein_coding	Caml	utr3	ENSMUSG00000021501	NonProperStrand	2	chr16	23110828	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr14	108986504	108986521	LTR	MTE-int	MaLR	chr14MTE-int108986408	ProperStrand	32	chr19	8798741	8798812	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-6.0316
chr11	69266814	69266830	protein_coding	Dnahc2	exon	ENSMUSG00000005237	ProperStrand	95	chr8	129468784	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-3.5517
chr6	49044229	49067295	protein_coding	Igf2bp3	exon	ENSMUSG00000029814	ProperStrand	23	chr4	131908689	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	7	-18.8919
chr10	70649553	70649574	LTR	MTEb-int	MaLR	chr10MTEb-int70649328	NonProperStrand	3	chr4	131865930	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.6896
chr7	31663114	31664217	protein_coding	Cd22	utr5	ENSMUSG00000030577	NonProperStrand	128	chr16	23111776	23111816	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-0.8482
chr5	112758435	112758451	protein_coding	Tfip11	exon	ENSMUSG00000029345	ProperStrand	111	chr11	69481433	69481468	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-2.1364
chr9	15151378	15151401	protein_coding-noncoding	5830418K08Rik	utr3	ENSMUSG00000046111	ProperStrand	1	chr9	57769479	57769805	protein_coding	Ubl7	exon	ENSMUSG00000055720	ProperStrand	9	1	-inf
chr1	120475438	120503905	protein_coding	Clasp1	exon	ENSMUSG00000064302	ProperStrand	23	chr16	23111372	23111500	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	6	-16.0867
chr5	122890301	122890381	protein_coding-noncoding	Anapc7	utr5	ENSMUSG00000029466	ProperStrand	1	chr10	23505164	23505254	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-inf
chr11	6519814	6519904	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	chr10	39978273	39978353	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-0.8881
chr17	57161631	57161731	protein_coding	Khsrp	utr3	ENSMUSG00000007670	ProperStrand	353	chr7	118219574	118219634	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-1.1913
chr19	3904233	3904250	protein_coding	Tcirg1	exon	ENSMUSG00000001750	ProperStrand	77	chr10	53322267	53325978	protein_coding	Asf1a	exon	ENSMUSG00000019857	ProperStrand	3	1	-19.5870
chr10	57686666	57686756	protein_coding	Dux	intron	ENSMUSG00000058537	NonProperStrand	2	chr10	57690695	57690785	pseudogene	4933403O03Rik	.	ENSMUSG00000057216	NonProperStrand	1	1	-inf
chr9	106795802	106795937	protein_coding	Dock3	utr3	ENSMUSG00000039716	ProperStrand	24	chr14	56159294	56159311	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	6	-inf
chr16	16231066	16231156	protein_coding	Pkp2	intron	ENSMUSG00000041957	ProperStrand	19	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	2	-15.1557
chr2	180441208	180441298	protein_coding	Dido1	intron	ENSMUSG00000038914	ProperStrand	81	chr7	29136542	29136622	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.8745
chr8	119476843	119476893	protein_coding	Atmin	exon	ENSMUSG00000047388	ProperStrand	26	chr4	131866157	131866247	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-5.2680
chr8	112576416	112576432	LINE	L1_Mus3	L1	chr8L1_Mus3112576213	ProperStrand	24	chr1	162965980	162965999	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-5.3608
chr13	55268791	55268863	protein_coding	Fgfr4	exon	ENSMUSG00000005320	ProperStrand	2	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-9.4105
chr16	23110986	23111010	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr15	79908957	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-1.6240
chr14	56159294	56159311	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	chr4	131866155	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-3.0363
chr13	47193618	47193698	protein_coding	Dek	exon	ENSMUSG00000021377	ProperStrand	36	chr8	73419657	73419747	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.0767
chr2	138188029	138188045	protein_coding	Btbd3	intron	ENSMUSG00000062098	NonProperStrand	121	chr17	71990923	71991000	snoRNA	ENSMUSG00000092713_CT010429.1	.	ENSMUSG00000092713	ProperStrand	182	1	-9.6795
chr11	77326639	77326656	protein_coding	Trp53i13	intron	ENSMUSG00000044328	ProperStrand	14	chr4	46508040	46508157	snoRNA	ENSMUSG00000064410_SNORA36	.	ENSMUSG00000064410	ProperStrand	133	1	-14.6815
chr5	32657192	32657208	protein_coding	Plb1	exon	ENSMUSG00000029134	ProperStrand	50	chr8	74843748	74843780	protein_coding	Klf2	exon	ENSMUSG00000055148	ProperStrand	82	1	-13.0548
chr2	31472335	31472435	protein_coding	Fubp3	utr3	ENSMUSG00000026843	ProperStrand	35	chr16	57391685	57391748	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	1	-11.3934
chr17	84236811	84236828	protein_coding	Haao	intron	ENSMUSG00000000673	NonProperStrand	10	chrX	96269807	96269832	protein_coding	Stard8	utr3	ENSMUSG00000031216	ProperStrand	142	1	-15.2601
chr2	32818887	32818934	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	chr16	43886790	43886844	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	1	-0.9757
chr18	10726377	10726418	protein_coding	Mib1	exon	ENSMUSG00000024294	ProperStrand	27	chr11	6428035	6428097	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.6948
chr4	86459402	86459419	protein_coding	Dennd4c	exon	ENSMUSG00000038024	ProperStrand	42	chr1	72758331	72758748	protein_coding	Rpl37a	exon	ENSMUSG00000046330	ProperStrand	94	2	-19.1750
chr13	69754367	69756345	protein_coding	Nsun2	exon	ENSMUSG00000021595	ProperStrand	110	chr6	125115582	125115603	protein_coding	Gapdh	utr5	ENSMUSG00000057666	ProperStrand	356	1	-8.5322
chr1	94361019	94364017	protein_coding	Ndufa10	exon	ENSMUSG00000026260	ProperStrand	14	chr1	162965983	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-6.4421
chr7	30231493	30231593	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	chr13	23855723	23855760	protein_coding	Hist1h1a	exon	ENSMUSG00000049539	ProperStrand	34	3	-19.2847
chr3	73695530	73695610	LINE	L1Md_T	L1	chr3L1Md_T73695001	ProperStrand	1	chr14	34781052	34781142	protein_coding	Zfp488	utr3	ENSMUSG00000044519	NonProperStrand	39	1	-inf
chr3	143865333	143865349	protein_coding	Lmo4	intron	ENSMUSG00000028266	ProperStrand	10	chr6	71832629	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-9.2340
chr3	151906856	151906873	protein_coding	Nexn	exon	ENSMUSG00000039103	ProperStrand	2	chr5	108334195	108334254	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-12.2128
chr10	80641568	80644265	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr8	73419656	73419783	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	16	-2.0937
chr10	87935471	87935668	protein_coding	Sycp3	exon	ENSMUSG00000020059	ProperStrand	27	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-10.9825
chr17	24301272	24301336	protein_coding	Atp6v0c	utr3	ENSMUSG00000024121	ProperStrand	75	chr5	34234244	34234262	protein_coding	Whsc1	utr5	ENSMUSG00000057406	ProperStrand	409	1	-9.0217
chr2	76689736	76689752	protein_coding	Ttn	exon	ENSMUSG00000051747	ProperStrand	66	chr4	132394437	132394462	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	1	-8.9466
chrX	91435147	91435176	protein_coding	Eif2s3x	utr3	ENSMUSG00000035150	NonProperStrand	83	chr4	147046913	147046978	protein_coding	2610305D13Rik	intron	ENSMUSG00000066000	ProperStrand	7	3	-20.0711
chr2	122573018	122573092	protein_coding	Pldn	utr3	ENSMUSG00000005804	ProperStrand	49	chr2	26493393	26493483	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-4.1229
chr17	45708098	45708397	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr8	74167779	74167800	protein_coding	Unc13a	intron	ENSMUSG00000034799	ProperStrand	13	1	-9.8259
chr9	114314726	114314743	protein_coding	Glb1	exon	ENSMUSG00000045594	ProperStrand	67	chr11	68886933	68887034	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-3.9361
chr12	110918158	110918190	snoRNA	ENSMUSG00000065749_AF357428	.	ENSMUSG00000065749	ProperStrand	218	chr10	23505559	23505618	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-5.0152
chr9	40612864	40612921	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	chr19	8799830	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	5	-8.4864
mmu-miR-6240	3	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr13	55671024	55671083	protein_coding	Fam193b	utr5	ENSMUSG00000021495	ProperStrand	51	2	-10.1023
chr18	36447407	36447487	protein_coding	Pura	exon	ENSMUSG00000043991	ProperStrand	20	chr17	39985396	39985486	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-8.1305
chr7	89422493	89424643	protein_coding	Sh3gl3	exon	ENSMUSG00000030638	ProperStrand	2	chr18	35102299	35102337	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-14.0358
chr10	41644311	41644329	protein_coding	Armc2	exon	ENSMUSG00000071324	ProperStrand	281	chr11	106362568	106362635	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-4.3898
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chrX	153840486	153840503	protein_coding	Phex	intron	ENSMUSG00000057457	ProperStrand	6	1	-14.1269
chr4	131865854	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr5	108336362	108336497	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	59	-1.8771
chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	chr4	116827118	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	2	-6.8562
chr6	54379743	54379760	lincRNA	9130019P16Rik	exon	ENSMUSG00000073067	ProperStrand	255	chr9	78215537	78215571	protein_coding	Dppa5a	exon	ENSMUSG00000060461	ProperStrand	79	1	-9.8600
chr15	96827220	96840616	protein_coding	Slc38a4	exon	ENSMUSG00000022464	ProperStrand	139	chr2	130101991	130102089	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	2	-6.3370
chr15	25643964	25651933	protein_coding	Myo10	exon	ENSMUSG00000022272	ProperStrand	168	chr2	158182201	158182291	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-3.0755
chr12	86564558	86564633	protein_coding	Eif2b2	intron	ENSMUSG00000004788	ProperStrand	15	chr7	116664852	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-12.3193
chr15	10504979	10504995	protein_coding	Rai14	exon	ENSMUSG00000022246	ProperStrand	180	chr12	113974830	113974871	protein_coding	AW555464	exon	ENSMUSG00000072825	ProperStrand	96	1	-10.1651
chr17	35400981	35401028	protein_coding	H2-D1	exon	ENSMUSG00000073411	ProperStrand	1	chr10	23505173	23505263	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-inf
chr6	7625337	7625406	protein_coding	Asns	exon	ENSMUSG00000029752	ProperStrand	59	chr11	99885311	99885327	protein_coding	Krt33b	exon	ENSMUSG00000057723	NonProperStrand	352	2	-15.4632
chr2	179322378	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chrX	71517906	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	2	-7.4835
chr11	22301830	22301920	LINE	L1Md_F2	L1	chr11L1Md_F222301822	NonProperStrand	1	chr12	29123151	29123231	protein_coding	Dcdc2c	utr3	ENSMUSG00000020633	NonProperStrand	5	1	-inf
chr9	82787137	82787227	protein_coding	Phip	utr3	ENSMUSG00000032253	ProperStrand	43	chr18	33954867	33954947	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-4.1285
chr2	179992740	179992941	protein_coding	Rps21	exon	ENSMUSG00000039001	ProperStrand	46	chr6	115757992	115758010	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-5.9938
chrX	7399759	7399839	protein_coding	Kcnd1	utr5	ENSMUSG00000009731	ProperStrand	19	chr17	24857760	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.3961
chr2	29878186	29878202	protein_coding	Spna2	intron	ENSMUSG00000057738	NonProperStrand	6	chr9	15118322	15118357	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-8.0740
chr15	36705259	36706003	protein_coding	Ywhaz	exon	ENSMUSG00000022285	ProperStrand	73	chr9	15119704	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.2955
chr11	99283266	99283282	protein_coding	Krt12	exon	ENSMUSG00000020912	ProperStrand	10	chr15	102985884	102985954	protein_coding	Smug1	utr3	ENSMUSG00000036061	ProperStrand	4	1	-19.9092
chr14	8999250	8999350	protein_coding	Pdhb	exon	ENSMUSG00000021748	ProperStrand	28	chr4	131908236	131908344	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	12	-20.1979
chr11	75565555	75569095	protein_coding	Ywhae	exon	ENSMUSG00000020849	ProperStrand	176	chr18	33954920	33954942	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	3	-4.7658
chr19	4624138	4624690	protein_coding	Rce1	exon	ENSMUSG00000024889	ProperStrand	11	chr16	23111451	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.1830
chr9	79740468	79740548	protein_coding	Filip1	intron	ENSMUSG00000034898	NonProperStrand	3	chr13	43370923	43371013	protein_coding	Gfod1	intron	ENSMUSG00000051335	ProperStrand	37	1	-20.6471
chr2	26493362	26493387	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr8	73368330	73368430	protein_coding	Kcnn1	utr3	ENSMUSG00000002908	ProperStrand	3	1	-12.5347
chr15	99433436	99433452	protein_coding	Aqp6	exon	ENSMUSG00000043144	NonProperStrand	45	chr4	131865913	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-3.9969
chr2	154698229	154718544	protein_coding	Eif2s2	utr5	ENSMUSG00000074656	ProperStrand	96	chr4	131865858	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-3.4425
chr2	25218769	25218869	protein_coding	Uap1l1	exon	ENSMUSG00000026956	ProperStrand	8	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-7.5918
chr16	31325736	31325816	LINE	Lx8	L1	chr16Lx831325682	ProperStrand	1	chr15	98864966	98867493	protein_coding	Tuba1c	exon	ENSMUSG00000043091	ProperStrand	28	1	-inf
chr5	93596551	93596631	protein_coding	Sept11	exon	ENSMUSG00000058013	ProperStrand	79	chr13	90238630	90238720	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	1	-8.0967
chr11	97032868	97048705	protein_coding	Kpnb1	exon	ENSMUSG00000001440	ProperStrand	197	chr17	24857716	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	13	-18.5145
chr2	120341747	120341780	protein_coding	Zfp106	exon	ENSMUSG00000027288	ProperStrand	199	chr9	120037934	120038056	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	15	-19.1647
chr6	47738083	47738119	misc_RNA	Y_RNA	.	ENSMUSG00000065701	ProperStrand	129	chr4	107596083	107596100	protein_coding	Cpt2	utr5	ENSMUSG00000028607	NonProperStrand	106	1	-10.6332
chr16	30338713	30338815	protein_coding	Atp13a3	intron	ENSMUSG00000022533	ProperStrand	45	chr11	97642952	97642977	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.9748
chr3	104764495	104764511	protein_coding	Wnt2b	utr5	ENSMUSG00000027840	NonProperStrand	50	chr12	70473590	70473654	protein_coding	Arf6	utr5	ENSMUSG00000044147	ProperStrand	32	1	-14.9491
chr12	35695401	35695481	LINE	Lx9	L1	chr12Lx935695327	NonProperStrand	1	chr12	35695576	35695666	LINE	Lx9	L1	chr12Lx935695501	ProperStrand	1	1	-inf
chr5	117735738	117735759	protein_coding	Pebp1	exon	ENSMUSG00000032959	ProperStrand	54	chr18	12172461	12172477	protein_coding	6030446N20Rik	intron	ENSMUSG00000049411	ProperStrand	235	1	-10.7880
chr9	95525011	95525036	antisense	Gm16126	.	ENSMUSG00000086585	NonProperStrand	229	chr5	121655053	121655153	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-1.4788
chr8	113568852	113569466	protein_coding	Aars	exon	ENSMUSG00000031960	ProperStrand	355	chr8	129468746	129468826	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-1.3603
chr2	4974190	4974207	protein_coding	Optn	exon	ENSMUSG00000026672	ProperStrand	451	chr2	130103432	130103486	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-4.1242
chr9	113887324	113887380	protein_coding	Fbxl2	utr3	ENSMUSG00000032507	ProperStrand	7	chr4	131866159	131866249	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-7.9553
chr16	32630316	32630339	protein_coding	Tfrc	exon	ENSMUSG00000022797	ProperStrand	71	chr17	35087894	35087941	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	2	-8.0526
chr18	12297887	12297961	protein_coding	Riok3	exon	ENSMUSG00000024404	ProperStrand	38	chr8	77742558	77742574	protein_coding	Rasd2	exon	ENSMUSG00000034472	NonProperStrand	237	1	-11.4803
chr4	131865388	131865508	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	chr2	91436228	91436335	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	4	-1.1107
chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-5.8484
chr5	135529917	135529988	snoRNA	ENSMUSG00000088008_SCARNA20	.	ENSMUSG00000088008	ProperStrand	139	chr1	89681235	89681293	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-3.8350
chr18	65355631	65358366	protein_coding	Nedd4l	exon	ENSMUSG00000024589	ProperStrand	44	chr15	34370597	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-4.1297
chr4	122973266	122974951	protein_coding	Pabpc4	exon	ENSMUSG00000011257	ProperStrand	85	chr6	39465307	39465327	protein_coding	Dennd2a	intron	ENSMUSG00000038456	NonProperStrand	5	1	-17.5554
chr14	32042378	32042394	protein_coding	Sema3g	utr3	ENSMUSG00000021904	NonProperStrand	47	chr6	87854914	87855226	protein_coding	Copg	exon	ENSMUSG00000030058	ProperStrand	68	2	-inf
chr12	74282788	74282830	protein_coding	Mnat1	exon	ENSMUSG00000021103	ProperStrand	5	chr11	69481335	69481411	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-8.1843
chr14	35008668	35008684	protein_coding	Gprin2	exon	ENSMUSG00000071531	NonProperStrand	2	chr18	35716762	35716829	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-9.2832
chr10	70698356	70700588	protein_coding	Tfam	exon	ENSMUSG00000003923	ProperStrand	13	chr5	121655127	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-6.7475
chr13	37271187	37271277	LTR	MTE-int	MaLR	chr13MTE-int37270935	NonProperStrand	1	chr13	37271381	37271471	SINE	B2_Mm1a	B2	chr13B2_Mm1a37271349	ProperStrand	1	1	-inf
chr4	129516569	129516624	protein_coding	Ptp4a2	utr5	ENSMUSG00000028788	ProperStrand	27	chr3	123210877	123210977	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.4658
chr17	35972446	35972536	protein_coding	Tubb5	exon	ENSMUSG00000001525	ProperStrand	624	chr1	88247814	88247876	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-1.0821
chr11	50114421	50125145	protein_coding	Canx	exon	ENSMUSG00000020368	ProperStrand	296	chr11	69483136	69483205	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-0.8342
chr2	32818803	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	chr9	64143736	64143870	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	2	-1.6209
chr4	53015201	53015217	SINE	B1F1	Alu	chr4B1F153015138	ProperStrand	102	chr7	27957942	27957972	protein_coding	Rab4b	exon	ENSMUSG00000053291	ProperStrand	5	1	-17.2580
chr14	51427119	51427219	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr1	162966346	162966363	non_coding	Gas5	.	ENSMUSG00000053332	ProperStrand	144	1	-5.4849
chr6	126075509	126075526	protein_coding	Ntf3	intron	ENSMUSG00000049107	NonProperStrand	38	chrX	84483704	84483723	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-9.1667
chr9	40611687	40611736	snoRNA	ENSMUSG00000075876_Snord14c	.	ENSMUSG00000075876	ProperStrand	104	chr17	24857740	24857832	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	12	-inf
chr16	55969629	55969665	protein_coding	Rpl24	exon	ENSMUSG00000022601	ProperStrand	149	chr1	9932549	9932597	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	2	-9.6398
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chrX	70966313	70966329	protein_coding	Abcd1	exon	ENSMUSG00000031378	NonProperStrand	1	1	-inf
chr9	65071370	65071386	protein_coding	Parp16	intron	ENSMUSG00000032392	NonProperStrand	1	chr16	23110828	23110867	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr17	57164741	57164930	protein_coding	Khsrp	exon	ENSMUSG00000007670	ProperStrand	353	chr5	31447122	31447873	protein_coding	Mpv17	exon	ENSMUSG00000090262	ProperStrand	13	1	-12.8803
chr2	118611946	118611962	protein_coding	Disp2	exon	ENSMUSG00000040035	NonProperStrand	204	chr16	23110454	23110526	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-0.7084
chrX	71589886	71589905	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr14	76372291	76372424	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	1	-5.8602
chrX	57829544	57829563	antisense	Gm14661	.	ENSMUSG00000067835	ProperStrand	9	chr7	29136525	29136557	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.9747
chr4	155600934	155600952	protein_coding	Plekhn1	intron	ENSMUSG00000078485	ProperStrand	2	chr10	23505152	23505255	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-8.0476
chrX	105482924	105482946	LINE	Lx8	L1	chrXLx8105482773	NonProperStrand	1	chr9	59526791	59526867	protein_coding	Pkm2	utr3	ENSMUSG00000032294	ProperStrand	1296	1	-inf
chr3	113827103	113827119	protein_coding	Col11a1	utr3	ENSMUSG00000027966	NonProperStrand	139	chr16	23111372	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-0.8172
chr1	74350731	74350749	protein_coding	Pnkd	intron	ENSMUSG00000026179	ProperStrand	22	chr7	52382805	52382832	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-8.7673
chr13	109781566	110640488	protein_coding	Pde4d	intron	ENSMUSG00000021699	ProperStrand	92	chr4	131865855	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-2.2365
chr7	13511809	13511951	protein_coding	Rps5	exon	ENSMUSG00000012848	ProperStrand	108	chr9	120039558	120039624	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	3	-6.1311
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr3	68889203	68889255	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	3	-1.0680
chr6	142444152	142451601	protein_coding	Ldhb	intron	ENSMUSG00000030246	ProperStrand	224	chr5	130300490	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-1.3496
chr11	87172190	87172206	protein_coding	Ppm1e	exon	ENSMUSG00000046442	ProperStrand	112	chr11	62418013	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-4.3532
chr10	41994812	41994912	protein_coding	Foxo3	exon	ENSMUSG00000048756	ProperStrand	59	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-3.6344
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr1	77501414	77501494	protein_coding	Epha4	intron	ENSMUSG00000026235	ProperStrand	57	1	-5.0538
chr2	83644877	83644894	protein_coding	Itgav	utr3	ENSMUSG00000027087	NonProperStrand	33	chr16	23111776	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.9163
chr4	135981396	135981420	protein_coding	Htr1d	intron	ENSMUSG00000070687	NonProperStrand	21	chr2	130103751	130103811	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	6	-19.4242
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr4	79649674	79649724	pseudogene	Gm11408	.	ENSMUSG00000083076	ProperStrand	11	2	-17.5959
chr1	173054416	173054437	protein_coding	1700009P17Rik	intron	ENSMUSG00000026649	ProperStrand	4	chr4	131908755	131908855	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-inf
chr4	134879924	134880014	protein_coding	Srrm1	exon	ENSMUSG00000028809	ProperStrand	142	chr3	123210905	123210985	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-0.8461
chr1	53409486	53409502	protein_coding	Asnsd1	utr5	ENSMUSG00000026095	NonProperStrand	105	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-9.6399
chr8	46855240	46855906	protein_coding	Sorbs2	exon	ENSMUSG00000031626	ProperStrand	50	chr11	91438238	91438254	protein_coding	Kif2b	exon	ENSMUSG00000046755	NonProperStrand	5	1	-18.8567
chr3	116251108	116251125	protein_coding	Dbt	utr3	ENSMUSG00000000340	ProperStrand	6	chr8	73419657	73419757	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-12.6132
chr16	5256015	5256031	protein_coding	Fam86	utr5	ENSMUSG00000022544	ProperStrand	231	chr8	129468763	129468799	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-2.0091
chr14	51427237	51427275	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr19	8798507	8798553	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-0.8933
chr8	110112180	110112212	protein_coding	Psmd7	exon	ENSMUSG00000039067	ProperStrand	36	chr17	24857750	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	3	-8.1185
chr10	7675761	7675778	protein_coding	Tab2	utr5	ENSMUSG00000015755	NonProperStrand	9	chr2	130101992	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	2	-14.7170
chr9	78023109	78023194	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr17	35088969	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	5	-2.1903
chr14	15572350	15572367	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr14	35504940	35504992	protein_coding	Wapal	exon	ENSMUSG00000041408	ProperStrand	93	1	-10.4027
chr1	64782204	64782294	protein_coding	Fzd5	exon	ENSMUSG00000045005	ProperStrand	175	chr7	117189863	117189953	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	16	-18.9528
chr13	30905992	30906027	protein_coding	Exoc2	utr3	ENSMUSG00000021357	ProperStrand	24	chr16	23110855	23110945	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.3518
chr8	114437838	114437924	protein_coding	Tmem231	exon	ENSMUSG00000031951	ProperStrand	17	chr11	98878371	98878421	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	4	-20.1633
chr7	88169740	88169808	protein_coding	Zfp592	exon	ENSMUSG00000005621	ProperStrand	26	chr2	26494789	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	3	-11.2300
chr9	30899310	30899352	protein_coding	St14	intron	ENSMUSG00000031995	ProperStrand	90	chr9	15119739	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.9534
chr8	73286887	73290471	protein_coding	Ifi30	exon	ENSMUSG00000031838	ProperStrand	40	chr4	131865866	131865979	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-6.4934
chrX	127781092	127781112	LINE	Lx	L1	chrXLx127780898	ProperStrand	24	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.3401
chr1	181476982	181476999	protein_coding	Cnst	intron	ENSMUSG00000038949	ProperStrand	40	chr8	73419649	73419726	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.8776
chr15	82953094	82953163	protein_coding	Rrp7a	exon	ENSMUSG00000018040	ProperStrand	5	chr4	131865382	131865472	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-9.0535
chr3	115418096	115418114	pseudogene	Gm9889	.	ENSMUSG00000052769	NonProperStrand	4	chrX	71517821	71517951	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	3	-20.7034
chr3	104607409	104607439	protein_coding	Mov10	exon	ENSMUSG00000002227	ProperStrand	96	chr15	79913288	79913344	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.7459
chr8	72441356	72441956	protein_coding	Gatad2a	exon	ENSMUSG00000036180	ProperStrand	112	chr4	131865860	131865969	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	9	-13.3854
chr7	13610265	13615835	protein_coding	Trim28	exon	ENSMUSG00000005566	ProperStrand	296	chr9	120038494	120038642	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-1.3946
chr14	30851615	30851631	protein_coding	Chdh	utr3	ENSMUSG00000015970	ProperStrand	50	chr18	56692217	56693883	protein_coding	Aldh7a1	exon	ENSMUSG00000053644	ProperStrand	14	1	-16.7298
chr2	26493406	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr17	46583529	46583545	protein_coding	Ttbk1	exon	ENSMUSG00000015599	ProperStrand	5	1	-11.3307
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr10	79845022	79845058	protein_coding	Mex3d	exon	ENSMUSG00000048696	ProperStrand	14	1	-10.9288
chr18	75160711	75160755	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	chr17	35089182	35089253	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	4	-6.9015
chr17	65452916	65452938	LTR	MTC	MaLR	chr17MTC65452903	NonProperStrand	12	chr4	131908236	131908286	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.2270
chr5	74489202	74489288	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr3	102965504	102966921	protein_coding	Dennd2c	exon	ENSMUSG00000007379	ProperStrand	19	2	-12.7083
chr1	82283794	82283810	protein_coding	Irs1	exon	ENSMUSG00000055980	ProperStrand	6	chr4	131865461	131865503	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-8.6503
chr2	57090809	57090828	protein_coding	Gpd2	utr5	ENSMUSG00000026827	ProperStrand	93	chr15	34370545	34370618	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-2.7605
chr11	97889780	97890722	protein_coding	Rpl19	exon	ENSMUSG00000017404	ProperStrand	120	chr4	131865855	131865977	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.6746
chr5	100465642	100465942	protein_coding	Hnrpdl	exon	ENSMUSG00000029328	ProperStrand	39	chr5	147646730	147646810	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	1	-8.8229
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chrX	45485115	45485131	protein_coding	Xpnpep2	exon	ENSMUSG00000037005	NonProperStrand	1	1	-inf
chr3	67746658	67746679	protein_coding	Iqcj	intron	ENSMUSG00000051777	NonProperStrand	5	chr5	130300470	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-12.2420
chr12	114312013	114312047	protein_coding	Pacs2	utr3	ENSMUSG00000021143	ProperStrand	14	chr17	35089182	35089208	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	2	-13.4691
chr9	65044377	65044467	snRNA	ENSMUSG00000075763_U5	.	ENSMUSG00000075763	ProperStrand	216	chr7	116664817	116664897	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	6	-6.4638
chr12	32003213	32003230	protein_coding	Gm11053	intron	ENSMUSG00000079147	ProperStrand	12	chr9	40612885	40612921	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	1	-12.8261
chr13	63448757	63448847	protein_coding	Fancc	exon	ENSMUSG00000021461	ProperStrand	11	chr11	97642995	97643075	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-5.6855
chr14	31827477	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	chr12	106269284	106269443	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	6	-1.6684
chr14	46213162	46213178	antisense	Gm15601	.	ENSMUSG00000085913	ProperStrand	8	chr8	125009790	125010240	protein_coding	Fam38a	exon	ENSMUSG00000014444	ProperStrand	132	5	-19.6536
chr15	85730242	85730258	protein_coding	Celsr1	utr3	ENSMUSG00000016028	NonProperStrand	5	chr11	62416993	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-11.1760
chr3	9565189	9565234	protein_coding	Zfp704	exon	ENSMUSG00000040209	ProperStrand	67	chr1	185857228	185857244	protein_coding	1700056E22Rik	exon	ENSMUSG00000044854	ProperStrand	173	1	-10.9666
chr12	60289370	60289456	protein_coding	Ctage5	exon	ENSMUSG00000021000	ProperStrand	35	chr6	88043903	88043935	protein_coding	Rpn1	exon	ENSMUSG00000030062	ProperStrand	58	1	-14.4763
chr4	100575091	100575112	protein_coding	Cachd1	intron	ENSMUSG00000028532	ProperStrand	2	chr16	23110911	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr4	131865416	131865516	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	chr13	90238667	90238722	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	8	-7.9602
chr16	98284949	98285039	LINE	L1_Mus1	L1	chr16L1_Mus198283327	ProperStrand	23	chr2	36817505	36817585	LINE	L1_Mur1	L1	chr2L1_Mur136817337	ProperStrand	1	1	-inf
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr3	67915045	67915061	protein_coding	Schip1	intron	ENSMUSG00000027777	ProperStrand	70	1	-12.8430
chr9	60717562	60717603	protein_coding	Uaca	exon	ENSMUSG00000034485	ProperStrand	109	chr11	97643008	97643080	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-2.8398
chr10	62285468	62342389	protein_coding	Tet1	exon	ENSMUSG00000047146	ProperStrand	286	chr16	23111704	23111820	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-1.4779
chr19	12648735	12648758	protein_coding	Fam111a	intron	ENSMUSG00000024691	NonProperStrand	1	chr1	72290908	72290972	snRNA	ENSMUSG00000093111_AC120136.1	.	ENSMUSG00000093111	ProperStrand	137	1	-inf
chr8	87391944	87392164	protein_coding	Farsa	exon	ENSMUSG00000003808	ProperStrand	21	chr9	15118331	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-9.0238
chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	chr3	85942714	85942779	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	1	-4.5889
chr11	7067186	7069426	protein_coding	Adcy1	exon	ENSMUSG00000020431	ProperStrand	183	chr11	75570492	75570520	protein_coding	Ywhae	exon	ENSMUSG00000020849	ProperStrand	176	1	-8.9200
chr10	80066920	80067020	protein_coding	Adat3	intron	ENSMUSG00000035370	ProperStrand	3	chr2	37255577	37255604	snoRNA	ENSMUSG00000077756_Snord90	.	ENSMUSG00000077756	ProperStrand	167	1	-17.7165
chr2	158185530	158185666	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr15	34370545	34370635	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	12	-2.7044
chr17	24215530	24215631	protein_coding	Pdpk1	utr3	ENSMUSG00000024122	ProperStrand	18	chr7	52382234	52382285	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-10.7210
chr15	72824946	72825036	protein_coding	Trappc9	intron	ENSMUSG00000047921	ProperStrand	44	chr9	51611906	51611996	protein_coding	Arhgap20	intron	ENSMUSG00000053199	ProperStrand	2	1	-inf
chr8	13416896	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr7	141399351	141399367	protein_coding	Adam12	intron	ENSMUSG00000054555	NonProperStrand	49	1	-6.8561
chr4	131908357	131908457	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr4	131866155	131866292	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	7	-1.9264
chr7	53050038	53050055	protein_coding	Lmtk3	exon	ENSMUSG00000062044	NonProperStrand	9	chr7	148634701	148634801	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-7.7646
chr16	22858176	22858266	protein_coding	Dnajb11	intron	ENSMUSG00000004460	ProperStrand	9	chr11	118635773	118635795	protein_coding	Rbfox3	intron	ENSMUSG00000025576	ProperStrand	19	1	-19.1915
chr8	34917216	34917306	protein_coding	Rbpms	exon	ENSMUSG00000031586	ProperStrand	58	chr4	131908360	131908440	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.4677
chr17	35379622	35379694	protein_coding	Ddx39b	utr5	ENSMUSG00000019432	ProperStrand	119	chr16	23110539	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	5	-7.7114
chr2	155299395	155299494	protein_coding	Ncoa6	utr5	ENSMUSG00000038369	ProperStrand	12	chr9	120039605	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-10.5507
chr11	116535914	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr8	26927388	26927473	protein_coding	Ash2l	utr3	ENSMUSG00000031575	ProperStrand	113	1	-4.6811
chr9	11798301	11798391	LINE	L1Md_F2	L1	chr9L1Md_F211798253	ProperStrand	1	chr9	11798186	11798276	LTR	IAPLTR1_Mm	ERVK	chr9IAPLTR1_Mm11797900	ProperStrand	1	1	-inf
chr9	106385308	106385359	protein_coding	Rrp9	exon	ENSMUSG00000041506	ProperStrand	32	chr5	115939503	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-9.1287
chr4	46181329	46181361	protein_coding	Ncbp1	exon	ENSMUSG00000028330	ProperStrand	21	chr8	69229035	69229052	protein_coding	Npy1r	exon	ENSMUSG00000036437	NonProperStrand	3	1	-inf
chr7	25773110	25774630	protein_coding	Atp1a3	exon	ENSMUSG00000040907	ProperStrand	66	chr16	23110456	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-6.1770
chr11	21797569	21797593	protein_coding	Wdpcp	intron	ENSMUSG00000020319	ProperStrand	9	chr4	131908362	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.8019
chr8	127411679	127411695	protein_coding	Gnpat	exon	ENSMUSG00000031985	NonProperStrand	13	chr5	74489620	74489670	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-6.7799
chr5	74489266	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr5	90673014	90673107	protein_coding	Ankrd17	exon	ENSMUSG00000055204	ProperStrand	77	1	-5.1357
chr2	29777862	29779067	protein_coding	Odf2	exon	ENSMUSG00000026790	ProperStrand	58	chr5	108334195	108334263	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-4.8854
chr13	69762149	69765423	protein_coding	Nsun2	exon	ENSMUSG00000021595	NonProperStrand	9	chr2	102482125	102482144	protein_coding	Pamr1	intron	ENSMUSG00000027188	ProperStrand	2	1	-inf
chrX	7720416	7720795	protein_coding	Rbm3	exon	ENSMUSG00000031167	ProperStrand	17	chr19	8963087	8963185	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.5881
chr12	112215557	112215574	protein_coding	Ankrd9	exon	ENSMUSG00000037904	ProperStrand	46	chr11	95198352	95198396	protein_coding	Fam117a	utr5	ENSMUSG00000038893	ProperStrand	18	1	-16.2956
chr8	97377097	97377122	protein_coding	Coq9	exon	ENSMUSG00000031782	ProperStrand	6	chrX	5684087	5684132	rRNA	n-R5s2	.	ENSMUSG00000075918	ProperStrand	25	1	-18.9810
chr11	115685428	115696127	protein_coding	Llgl2	utr5	ENSMUSG00000020782	ProperStrand	62	chr2	26493384	26493474	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-3.6816
chr12	114290175	114290191	protein_coding	Pacs2	intron	ENSMUSG00000021143	NonProperStrand	302	chr5	115401955	115402029	protein_coding	Hnf1a	intron	ENSMUSG00000029556	NonProperStrand	1	1	-inf
chr17	48553585	48553603	protein_coding	AI314976	exon	ENSMUSG00000040771	ProperStrand	5	chr4	131865855	131865978	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-6.5022
chr7	52382755	52382814	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	chr2	130101241	130101261	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-0.8611
chr16	90835030	90886155	protein_coding	4931408A02Rik	intron	ENSMUSG00000039903	ProperStrand	14	chr10	23505158	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-6.3221
chr11	4793137	4793214	protein_coding	Nipsnap1	utr3	ENSMUSG00000034285	ProperStrand	15	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-9.5441
chr18	33157688	33157705	protein_coding	Camk4	intron	ENSMUSG00000038128	NonProperStrand	42	chr6	71832638	71832687	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-6.3140
chr17	45705945	45706045	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr9	78326836	78326856	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-0.7032
chr3	86336017	86336033	protein_coding	Lrba	exon	ENSMUSG00000028080	NonProperStrand	10	chr7	29136525	29136586	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.7572
chr4	120204961	120204977	protein_coding	Slfnl1	utr5	ENSMUSG00000047518	ProperStrand	3	chr8	73419657	73419744	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-9.3031
chr8	113680903	113680928	protein_coding	Glg1	utr3	ENSMUSG00000003316	ProperStrand	83	chr4	131865914	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.2907
chr15	34945625	34945642	protein_coding	Stk3	intron	ENSMUSG00000022329	NonProperStrand	28	chr8	44381302	44381347	protein_coding	Zfp42	exon	ENSMUSG00000051176	ProperStrand	127	1	-13.3498
chr2	32310573	32310590	protein_coding	Naif1	exon	ENSMUSG00000039164	ProperStrand	3	chr17	24857764	24857781	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-8.3442
chr14	33779562	33779578	protein_coding	Wdfy4	exon	ENSMUSG00000051506	ProperStrand	14	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.3681
chr1	99863083	99863116	protein_coding	Pam	intron	ENSMUSG00000026335	ProperStrand	7	chr9	15118335	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-7.7405
chr9	108584767	108585394	protein_coding	Slc25a20	exon	ENSMUSG00000032602	ProperStrand	5	chr9	15119630	15119713	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-7.5411
chr8	23281209	23281309	protein_coding	Ckap2	intron	ENSMUSG00000037725	ProperStrand	69	chr2	140081090	140082721	protein_coding	Sel1l2	exon	ENSMUSG00000074764	NonProperStrand	52	9	-21.4993
chrX	71042645	71042673	protein_coding	Pdzd4	intron	ENSMUSG00000002006	ProperStrand	20	chr18	73693107	73693134	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-7.7147
chr3	88715213	88715230	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr5	126136612	126136628	protein_coding	Tmem132b	intron	ENSMUSG00000070498	NonProperStrand	3	1	-13.5901
chr7	118220465	118220486	protein_coding	Eif4g2	exon	ENSMUSG00000005610	ProperStrand	134	chr5	115939536	115939610	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	10	-19.0134
chr1	88424156	88424176	protein_coding	Ptma	intron	ENSMUSG00000026238	ProperStrand	385	chr6	123089131	123089269	protein_coding	Clec4a2	exon	ENSMUSG00000030148	ProperStrand	44	1	-10.2143
chr8	108776936	108776953	lincRNA	Gm17245	intron	ENSMUSG00000067626	ProperStrand	27	chr7	30231483	30231593	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	1	-10.4584
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr19	9018593	9020258	protein_coding	Mta2	exon	ENSMUSG00000071646	ProperStrand	70	1	-12.8430
chr6	32742905	32753952	protein_coding	Chchd3	exon	ENSMUSG00000053768	ProperStrand	6	chr15	81524827	81524845	protein_coding	Chadl	exon	ENSMUSG00000063765	ProperStrand	28	1	-18.9950
chr2	90235313	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr15	31399364	31399380	protein_coding	March6	exon	ENSMUSG00000039100	NonProperStrand	8	1	-8.5166
chr17	28467061	28467126	protein_coding-noncoding	Rpl10a	utr5	ENSMUSG00000037805	ProperStrand	14	chr9	120037971	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	2	-12.2633
chr10	120916897	120916987	LINE	L2a	L2	chr10L2a120916814	NonProperStrand	1	chr10	120917026	120917116	SINE	ID4_	ID	chr10ID4_120917014	ProperStrand	1	1	-inf
chr10	120709244	120712786	protein_coding	Tbc1d30	exon	ENSMUSG00000052302	ProperStrand	233	chr19	8800084	8800140	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-4.9434
chr10	127555661	127563943	protein_coding	Baz2a	exon	ENSMUSG00000040054	ProperStrand	274	chr4	131908688	131908901	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	9	-3.5664
chr9	63868722	63868738	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	chr4	140121137	140121153	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	1	-6.9572
chr17	35089183	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	chr2	18508669	18508716	tRNA	tRNA1947-AsnGTT	.	726383	ProperStrand	179	3	-8.4895
chr15	36528724	36528964	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr4	106472505	106472522	protein_coding	Acot11	intron	ENSMUSG00000034853	ProperStrand	61	1	-7.8497
chr15	27919625	27919642	protein_coding	Trio	intron	ENSMUSG00000022263	NonProperStrand	20	chr3	123210853	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-4.0323
chr1	14891981	14893316	protein_coding	Trpa1	exon	ENSMUSG00000032769	ProperStrand	24	chr15	79908929	79908996	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-7.2930
chr14	8748546	8749726	protein_coding	Flnb	exon	ENSMUSG00000025278	ProperStrand	124	chr5	130300460	130300540	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.3648
chr8	109034879	109035147	protein_coding	Cdh3	utr5	ENSMUSG00000061048	ProperStrand	62	chr16	23110455	23110521	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-4.2635
chr19	30173217	30173304	protein_coding	Gldc	utr3	ENSMUSG00000024827	ProperStrand	175	chr7	148634801	148634840	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-2.0907
chr17	35822058	35822257	protein_coding	Ddr1	exon	ENSMUSG00000003534	ProperStrand	129	chr2	163914326	163914343	protein_coding	Stk4	intron	ENSMUSG00000018209	ProperStrand	20	1	-14.0033
chr10	80616732	80616800	protein_coding	Pias4	utr3	ENSMUSG00000004934	ProperStrand	43	chr17	56753329	56753346	protein_coding	Rpl36	exon	ENSMUSG00000057863	ProperStrand	62	2	-inf
chr11	115861626	115861706	protein_coding	Itgb4	exon	ENSMUSG00000020758	ProperStrand	8	chr9	15119675	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-6.5261
chr2	165880551	165880633	protein_coding	Ncoa3	exon	ENSMUSG00000027678	ProperStrand	58	chr11	62416599	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-5.2322
chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr1	75506387	75506404	protein_coding	Inha	exon	ENSMUSG00000032968	ProperStrand	1	1	-inf
chr2	125389949	125389966	protein_coding	Cep152	exon	ENSMUSG00000068394	ProperStrand	60	chr2	26494775	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.1070
chr6	62318830	62318910	protein_coding	Fam190a	intron	ENSMUSG00000039578	NonProperStrand	24	chr18	86596122	86596212	protein_coding	Neto1	intron	ENSMUSG00000050321	ProperStrand	2	1	-inf
chr15	81479711	81479736	protein_coding	Ep300	exon	ENSMUSG00000055024	ProperStrand	118	chr11	62416951	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-4.7276
chr17	15658712	15658924	protein_coding	Pdcd2	exon	ENSMUSG00000014771	ProperStrand	4	chr12	106269323	106269403	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-9.7090
chr17	34166602	34166841	protein_coding	Slc39a7	exon	ENSMUSG00000024327	ProperStrand	39	chr5	130295441	130295491	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-6.0944
chr7	66083287	66083491	protein_coding	Atp10a	exon	ENSMUSG00000025324	ProperStrand	37	chr10	23505152	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-9.9604
chr15	73012086	73012135	protein_coding	Eif2c2	intron	ENSMUSG00000036698	ProperStrand	154	chr7	29136535	29136625	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-0.9653
chr3	102799849	102799865	protein_coding	Sike1	exon	ENSMUSG00000027854	ProperStrand	9	chr17	13184994	13185013	protein_coding	Wtap	utr5	ENSMUSG00000060475	ProperStrand	119	1	-15.8111
chr19	5798000	5798056	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr12	110874242	110874289	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	2	-7.1582
chr2	90235294	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	87835157	87835233	protein_coding	Calm2	exon	ENSMUSG00000036438	ProperStrand	59	4	-14.2930
chr10	85334679	85334741	protein_coding	Pwp1	utr5	ENSMUSG00000001785	ProperStrand	5	chrX	45788962	45788979	protein_coding	Elf4	intron	ENSMUSG00000031103	NonProperStrand	49	1	-19.0385
chr10	79750347	79750365	protein_coding	Dazap1	exon	ENSMUSG00000069565	ProperStrand	57	chr5	99987915	99987931	protein_coding	A930011G23Rik	exon	ENSMUSG00000089809	NonProperStrand	43	1	-14.0889
chr2	90235286	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr14	76372290	76372390	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	2	-1.7973
chr12	88488443	88496424	protein_coding	Pomt2	exon	ENSMUSG00000034126	NonProperStrand	331	chr7	52974964	52975000	protein_coding	Rpl18	exon	ENSMUSG00000059070	ProperStrand	116	1	-8.5711
chr9	99562448	99562551	protein_coding	Dzip1l	intron	ENSMUSG00000037784	ProperStrand	7	chr16	23111448	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	6	-20.0977
chr11	83254019	83254035	protein_coding	1700020L24Rik	exon	ENSMUSG00000035085	NonProperStrand	88	chr8	44278729	44278829	protein_coding	Triml2	exon	ENSMUSG00000091490	ProperStrand	32	1	-13.8138
chr11	97026143	97026296	protein_coding	Kpnb1	exon	ENSMUSG00000001440	ProperStrand	197	chr17	35299549	35299641	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-2.5909
chr7	52304992	52305033	protein_coding	Prr12	exon	ENSMUSG00000046574	ProperStrand	86	chr10	23505152	23505213	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-1.6109
chr13	60709542	60709559	protein_coding	Dapk1	intron	ENSMUSG00000021559	NonProperStrand	40	chr5	116044094	116044140	protein_coding	Gcn1l1	exon	ENSMUSG00000041638	ProperStrand	408	1	-10.2908
chr1	52289208	52289225	protein_coding	Gls	intron	ENSMUSG00000026103	NonProperStrand	7	chr16	23110896	23110912	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.4785
chr18	41356147	41356185	miRNA	Mir5097	dead	ENSMUSG00000093361	ProperStrand	221	chr4	131908418	131908454	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	2	-7.7862
chr4	53873606	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	chr9	64024466	64024550	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	3	-10.0952
chr7	29137394	29137567	protein_coding	Rps16	exon	ENSMUSG00000037563	ProperStrand	191	chr2	26494775	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	4	-5.3669
chr17	66743388	66743488	protein_coding	1110012J17Rik	intron	ENSMUSG00000052105	ProperStrand	60	chr12	21422748	21422803	protein_coding	Ywhaq	exon	ENSMUSG00000076432	ProperStrand	70	3	-inf
chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	chr1	88252835	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-3.7193
chr7	52714595	52714984	protein_coding	Ftl1	exon	ENSMUSG00000050708	ProperStrand	807	chr4	149615189	149616250	protein_coding	Eno1	exon	ENSMUSG00000063524	ProperStrand	432	12	-25.0151
chr4	140121137	140121153	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	ProperStrand	15	chr11	69483136	69483214	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	NonProperStrand	35	1	-17.3028
chr13	38438147	38438163	protein_coding	Bmp6	exon	ENSMUSG00000039004	ProperStrand	21	chr2	91436228	91436260	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-9.6143
chr11	94527542	94527559	protein_coding	Xylt2	exon	ENSMUSG00000020868	NonProperStrand	3	chr14	52829480	52829569	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-14.5715
chr12	55773522	55773549	protein_coding	Eapp	utr3	ENSMUSG00000054302	ProperStrand	2	chr9	120039578	120039678	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-10.6072
chr16	73028059	73028149	protein_coding	Robo1	exon	ENSMUSG00000022883	ProperStrand	47	chr16	23111389	23111469	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-3.0053
chr16	69863057	69863074	protein_coding	Speer2	intron	ENSMUSG00000063163	ProperStrand	6	chr11	6428088	6428156	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-7.7732
chr10	60519028	60519092	Low_complexity	GA-rich	Low_complexity	chr10GA-rich60519003	NonProperStrand	6	chr9	15118326	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	4	-19.8328
chr14	51427286	51427386	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	3	-10.6200
chr2	152222973	152223073	protein_coding	Sox12	exon	ENSMUSG00000051817	ProperStrand	31	chr5	130300483	130300549	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.6980
chr2	163454915	163462682	protein_coding	Serinc3	exon	ENSMUSG00000017707	ProperStrand	28	chr16	23110888	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-5.2588
chr2	90235294	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	97212783	97212807	protein_coding	Pllp	intron	ENSMUSG00000031775	NonProperStrand	4	1	-10.0500
chr2	127953344	127953361	protein_coding-noncoding	Bcl2l11	utr5	ENSMUSG00000027381	NonProperStrand	17	chr4	131908689	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-8.4805
chr5	130113540	130113630	protein_coding	Mmp17	utr3	ENSMUSG00000029436	ProperStrand	17	chr11	69481357	69481437	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-9.2482
chr11	64371006	64371096	LINE	L1MB5	L1	chr11L1MB564370346	NonProperStrand	1	chr7	54441770	54441860	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	1	-inf
chr9	15119645	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	chr2	26768049	26768121	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	10	-4.1173
chrX	147089441	147089457	protein_coding	Tro	exon	ENSMUSG00000025272	ProperStrand	13	chr9	120038610	120038664	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.9817
chr4	43505733	43505823	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chrX	132673816	132673833	protein_coding	Bex4	intron	ENSMUSG00000047844	NonProperStrand	70	1	-2.7966
chr11	116535465	116535534	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr14	31986839	31986923	protein_coding	Nisch	exon	ENSMUSG00000021910	ProperStrand	125	2	-7.4579
chr11	96205424	96205440	protein_coding	Hoxb3	utr5	ENSMUSG00000048763	ProperStrand	2	chr10	23505190	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-8.0476
chr3	13634393	13634473	LINE	Lx8	L1	chr3Lx813634178	NonProperStrand	1	chr3	13634562	13634652	LTR	RLTR13D4	ERVK	chr3RLTR13D413634533	NonProperStrand	1	1	-inf
chr12	66171153	66171189	protein_coding	Fkbp3	intron	ENSMUSG00000020949	ProperStrand	8	chrX	34622906	34623005	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-7.1329
chr11	83917760	83919719	protein_coding	Tada2a	exon	ENSMUSG00000018651	ProperStrand	32	chrX	19683228	19683244	protein_coding	Slc9a7	exon	ENSMUSG00000037341	NonProperStrand	136	1	-12.9406
chr9	82723543	82723559	protein_coding	Irak1bp1	utr5	ENSMUSG00000032251	NonProperStrand	16	chr16	23110868	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-5.6614
chrX	11635848	11635865	protein_coding	Bcor	exon	ENSMUSG00000040363	NonProperStrand	293	chr5	151755614	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-4.6316
chr4	44040398	44040423	protein_coding	Clta	intron	ENSMUSG00000028478	ProperStrand	59	chr18	35716832	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.1973
chr1	33828651	33828669	protein_coding	Zfp451	intron	ENSMUSG00000042197	NonProperStrand	393	chr1	59761695	59761716	snoRNA	ENSMUSG00000089093_Snord11	.	ENSMUSG00000089093	ProperStrand	193	1	-7.2183
chr14	51427119	51427219	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr1	70716461	70716480	protein_coding	Spag16	intron	ENSMUSG00000053153	NonProperStrand	34	1	-8.3469
chr10	4741155	4741171	protein_coding	Myct1	utr3	ENSMUSG00000046916	ProperStrand	42	chr4	131908810	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.7439
chr7	16771977	16772067	LTR	MLT1H	MaLR	chr7MLT1H16771970	ProperStrand	1	chr7	16772086	16772176	SINE	RSINE1	B4	chr7RSINE116772105	NonProperStrand	1	1	-inf
chr9	102237497	102237519	protein_coding	Ephb1	intron	ENSMUSG00000032537	ProperStrand	13	chr2	158182156	158182278	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-8.0614
chr5	116004264	116004280	protein_coding	Pxn	utr3	ENSMUSG00000029528	ProperStrand	171	chr5	121655069	121655153	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	4	-7.3683
chr12	60285265	60286725	protein_coding	Ctage5	exon	ENSMUSG00000021000	ProperStrand	35	chr3	28494313	28494370	protein_coding	Tnik	intron	ENSMUSG00000027692	ProperStrand	13	1	-17.5535
chr10	62275397	62342466	protein_coding	Tet1	exon	ENSMUSG00000047146	ProperStrand	286	chr5	74489564	74489677	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	2	-2.2957
chr13	23663284	23663363	protein_coding	Hist1h2bg	utr5	ENSMUSG00000058385	ProperStrand	29	chr13	51743614	51743704	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-8.3164
chr6	92828412	92828429	protein_coding	Gm15737	intron	ENSMUSG00000079462	ProperStrand	11	chr10	23505152	23505269	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.1476
chr7	149570432	149570463	protein_coding	Ctsd	intron	ENSMUSG00000007891	ProperStrand	60	chr7	133938768	133938869	protein_coding	Aldoa	utr3	ENSMUSG00000030695	ProperStrand	721	1	-8.3405
chr16	17038523	17043801	protein_coding	Mapk1	utr3	ENSMUSG00000063358	ProperStrand	67	chr11	62418052	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-5.3417
chr3	94973587	94973961	protein_coding	Sema6c	exon	ENSMUSG00000038777	ProperStrand	30	chr16	23110464	23110538	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.7075
chr13	9833579	9833615	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr11	77996697	77996713	protein_coding	Rpl23a	intron	ENSMUSG00000058546	NonProperStrand	7	1	-9.3156
chr6	124885330	124885420	protein_coding	Mlf2	exon	ENSMUSG00000030120	ProperStrand	80	chr15	34370545	34370625	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-3.0266
chr8	108811954	108811971	lincRNA	Gm17245	intron	ENSMUSG00000067626	ProperStrand	27	chr11	69483217	69483264	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.8930
chr12	112867273	112867315	protein_coding	Mark3	exon	ENSMUSG00000007411	ProperStrand	37	chr4	131908689	131908745	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.9439
chr9	43614628	43614718	protein_coding	Pvrl1	utr3	ENSMUSG00000032012	ProperStrand	45	chr5	108336381	108336461	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-8.9228
chr18	75161429	75161705	protein_coding	Rpl17	exon	ENSMUSG00000062328	ProperStrand	90	chr11	69481341	69481431	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-2.4869
chr17	29707548	29707648	protein_coding	Tbc1d22b	exon	ENSMUSG00000042203	ProperStrand	21	chr16	23110939	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.5481
chr15	10504979	10504995	protein_coding	Rai14	exon	ENSMUSG00000022246	ProperStrand	180	chr9	72569171	72569207	protein_coding	Nedd4	exon	ENSMUSG00000032216	ProperStrand	308	1	-7.8394
chr4	131908683	131908710	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr10	77514640	77514764	protein_coding	Dnmt3l	exon	ENSMUSG00000000730	ProperStrand	37	1	-8.2271
chr8	91552653	91555494	protein_coding	Sall1	exon	ENSMUSG00000031665	ProperStrand	96	chr9	15119646	15119767	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	4	-7.1980
chr18	33954572	33954672	lincRNA	2410004N09Rik	exon	ENSMUSG00000087590	ProperStrand	15	chr1	162966817	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-9.0520
chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	chr9	78327087	78327144	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-3.4338
chr10	62736232	62736268	protein_coding	Herc4	exon	ENSMUSG00000020064	ProperStrand	14	chrX	152009278	152009294	protein_coding	Ptchd1	exon	ENSMUSG00000041552	NonProperStrand	294	1	-13.0918
chr8	13416896	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr11	48616643	48616706	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	3	-7.0129
chr13	57074022	57074040	LINE	L1MC3	L1	chr13L1MC357073619	NonProperStrand	1	chr15	5068405	5068425	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-inf
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	4	-7.1566
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chrX	93136011	93136027	protein_coding	Las1l	exon	ENSMUSG00000057421	ProperStrand	248	1	-6.5459
chr18	10052132	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr19	17900101	17900117	snoRNA	ENSMUSG00000089540_snoU13	.	ENSMUSG00000089540	ProperStrand	99	1	-7.8003
chr10	61215809	61215853	protein_coding	H2afy2	intron	ENSMUSG00000020086	ProperStrand	16	chr3	153575090	153575116	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	1	-11.1766
chr10	127755278	127755295	protein_coding	Pan2	exon	ENSMUSG00000005682	NonProperStrand	6	chr2	128938509	128939265	protein_coding	Polr1b	exon	ENSMUSG00000027395	ProperStrand	27	1	-19.1215
chr10	5991429	5991508	protein_coding	Akap12	exon	ENSMUSG00000038587	ProperStrand	1008	chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	2	-6.6454
chr10	5990078	5990141	protein_coding	Akap12	utr3	ENSMUSG00000038587	ProperStrand	1008	chr9	64024528	64024567	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	2	-5.0667
chr4	131908810	131908915	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr16	23109040	23109090	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-1.6825
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	4974190	4974207	protein_coding	Optn	exon	ENSMUSG00000026672	ProperStrand	451	5	-6.4741
chr11	6428035	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr1	63225590	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	14	-3.2286
chr16	54679541	54679559	LTR	MYSERV16_I-int	ERVK	chr16MYSERV16_I-int54679027	NonProperStrand	31	chr5	121655031	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.0092
chr11	116535480	116535531	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr2	70927899	70927916	protein_coding	Dcaf17	exon	ENSMUSG00000041966	NonProperStrand	89	1	-5.1409
chr1	174435941	174435982	protein_coding	Tagln2	exon	ENSMUSG00000026547	ProperStrand	39	chr7	116664811	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.3149
chr1	173932306	173932334	protein_coding	Vangl2	utr3	ENSMUSG00000026556	ProperStrand	37	chr4	131866208	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	3	-10.9829
chr11	79250307	79254422	protein_coding	Nf1	exon	ENSMUSG00000020716	ProperStrand	42	chr16	23111389	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-5.0758
chr14	32072689	32072767	protein_coding	Bap1	utr3	ENSMUSG00000021901	ProperStrand	12	chr18	35716848	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-8.5963
chr11	115451723	115451739	protein_coding	Gga3	exon	ENSMUSG00000020740	NonProperStrand	50	chr1	133252401	133252451	protein_coding	Srgap2	intron	ENSMUSG00000026425	ProperStrand	299	1	-10.4615
chr2	38495720	38497709	protein_coding	Psmb7	exon	ENSMUSG00000026750	ProperStrand	18	chr2	146125209	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	1	-13.5117
chr8	125776577	125777901	protein_coding	Gm20388	intron	ENSMUSG00000092329	ProperStrand	295	chr1	88247772	88247875	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-2.1918
chr19	8798737	8798797	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	chr11	83107810	83107903	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	1	-1.0194
chr14	64081493	64081512	protein_coding	Fam167a	utr3	ENSMUSG00000035095	ProperStrand	80	chr16	23111415	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-1.7944
chr3	104615009	104615059	protein_coding	Mov10	intron	ENSMUSG00000002227	ProperStrand	96	chr5	121655036	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	8	-inf
chr4	116827269	116827359	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	chr16	43886849	43886929	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	1	-5.1709
chr4	151712956	151712973	protein_coding	Chd5	utr5	ENSMUSG00000005045	ProperStrand	51	chr4	131908236	131908284	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.6592
chr16	37777389	37777408	protein_coding	Fstl1	exon	ENSMUSG00000022816	ProperStrand	179	chr8	87580593	87580661	protein_coding	Tnpo2	utr3	ENSMUSG00000031691	ProperStrand	92	1	-10.2617
chrX	71589885	71589908	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr14	76247724	76247814	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-2.7395
chr2	6361534	6361550	protein_coding	Usp6nl	exon	ENSMUSG00000039046	NonProperStrand	6	chr18	35102297	35102342	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	2	-17.6801
chrX	130496426	130496668	protein_coding	Sytl4	exon	ENSMUSG00000031255	ProperStrand	169	chrX	71195342	71195430	protein_coding	Hcfc1	exon	ENSMUSG00000031386	ProperStrand	424	1	-7.3312
chr11	72503524	72525662	protein_coding	Ankfy1	utr5	ENSMUSG00000020790	ProperStrand	68	chr7	105504072	105504089	protein_coding	Tsku	intron	ENSMUSG00000049580	NonProperStrand	3	2	-inf
chr4	116862615	116862663	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-1.3060
chr6	126792144	126792161	protein_coding	Ndufa9	exon	ENSMUSG00000000399	ProperStrand	9	chr14	76247714	76247804	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-7.9615
chr9	120481305	120482715	protein_coding	Rpl14	exon	ENSMUSG00000025794	ProperStrand	123	chr18	33954814	33954918	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	4	-8.2797
chrX	138158320	138158336	protein_coding	Irs4	exon	ENSMUSG00000054667	ProperStrand	24	chr11	62416600	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-6.9803
chr12	72094025	72094061	protein_coding	Psma3	exon	ENSMUSG00000060073	ProperStrand	20	chr9	15119995	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	3	-inf
chr15	82497056	82497146	LINE	L1_Mur1	L1	chr15L1_Mur182496661	ProperStrand	1	chr15	82497322	82497402	LINE	L1_Mur1	L1	chr15L1_Mur182497264	NonProperStrand	1	1	-inf
chr11	95626146	95626175	protein_coding	Zfp652	utr3	ENSMUSG00000075595	ProperStrand	48	chr16	23111770	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.2671
chrX	160347488	160347504	protein_coding	Ap1s2	intron	ENSMUSG00000031367	ProperStrand	52	chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-6.7379
chr14	45949538	45949554	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	chr4	116827119	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	2	-6.3501
chr1	169319510	169319600	protein_coding	Mgst3	intron	ENSMUSG00000026688	ProperStrand	1	chr14	33005154	33005234	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-inf
chr2	32087268	32087368	protein_coding	Prrc2b	utr3	ENSMUSG00000039262	ProperStrand	344	chr19	8799612	8799646	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-3.4131
chr9	108884938	108885028	protein_coding-noncoding	Col7a1	utr5	ENSMUSG00000025650	ProperStrand	6	chr9	108884885	108884965	protein_coding	Col7a1	intron	ENSMUSG00000025650	ProperStrand	33	6	-inf
chr7	125278421	125278441	protein_coding	Smg1	utr3	ENSMUSG00000030655	ProperStrand	70	chr9	120039542	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	3	-7.7475
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr2	26314958	26314975	protein_coding	Notch1	utr3	ENSMUSG00000026923	ProperStrand	145	1	-6.0479
chr2	162898428	162898521	protein_coding	Mybl2	exon	ENSMUSG00000017861	ProperStrand	230	chr9	120038614	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-0.9507
chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	chr15	101919324	101919343	protein_coding	Eif4b	exon	ENSMUSG00000058655	ProperStrand	484	1	-4.1011
chr4	3762227	3762293	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	chr12	106269339	106269403	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	5	-6.1625
chr10	84582284	84582300	protein_coding	Mterfd3	utr3	ENSMUSG00000049038	NonProperStrand	13	chr4	131908686	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-9.6254
chr8	26718488	26718547	protein_coding	Whsc1l1	intron	ENSMUSG00000054823	ProperStrand	36	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-8.0042
chr16	90386836	90447171	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	chr16	23111399	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-1.2881
chr15	99548653	99548669	protein_coding	Gpd1	exon	ENSMUSG00000023019	ProperStrand	40	chr2	145077957	145209256	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-8.5361
chr4	91023565	91023614	protein_coding	Elavl2	intron	ENSMUSG00000008489	ProperStrand	52	chr9	120038552	120038607	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.2976
chr2	119122905	119122948	protein_coding	Vps18	exon	ENSMUSG00000034216	ProperStrand	21	chr4	131908695	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.9128
chr5	42136455	42136473	Low_complexity	GA-rich	Low_complexity	chr5GA-rich42136449	NonProperStrand	106	chr5	65952377	65952395	protein_coding	Ube2k	intron	ENSMUSG00000029203	ProperStrand	289	1	-9.0214
chr14	57217251	57221177	protein_coding	Parp4	exon	ENSMUSG00000054509	ProperStrand	44	chr4	131866156	131866236	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-7.1143
chr7	95266597	95266613	protein_coding	Grm5	intron	ENSMUSG00000049583	NonProperStrand	145	chr9	120039626	120039674	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.8141
chr7	121170960	121170978	protein_coding	Spon1	intron	ENSMUSG00000038156	NonProperStrand	11	chr1	162966812	162966851	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-9.6957
chr1	8973839	8973929	protein_coding	Sntg1	intron	ENSMUSG00000025909	NonProperStrand	11	chr2	130698685	130698775	protein_coding	4930402H24Rik	intron	ENSMUSG00000027309	NonProperStrand	12	1	-inf
chr7	133639023	133639039	protein_coding	Atxn2l	exon	ENSMUSG00000032637	ProperStrand	219	chr17	24665442	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-2.5555
chr3	41471096	41475315	protein_coding	Sclt1	exon	ENSMUSG00000059834	ProperStrand	16	chr16	23111373	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.4608
chr8	72433406	72436859	protein_coding	Gatad2a	exon	ENSMUSG00000036180	ProperStrand	112	chr10	23505149	23505284	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-4.1538
chr6	128325728	128325828	protein_coding	Foxm1	utr3	ENSMUSG00000001517	ProperStrand	31	chr4	131865930	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.8751
chr8	97346680	97346780	protein_coding	Ciapin1	utr3	ENSMUSG00000031781	ProperStrand	24	chr16	23111453	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.7195
chr12	110784464	110784564	lincRNA	Meg3	exon	ENSMUSG00000021268	ProperStrand	61	chr17	24665449	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-4.9087
chr14	51427119	51427219	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr14	27913309	27913333	protein_coding	Il17rd	exon	ENSMUSG00000040717	ProperStrand	24	1	-9.0519
chr2	120361335	120361370	lincRNA	Gm17675	exon	ENSMUSG00000091714	ProperStrand	3	chr16	23110828	23110962	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	NonProperStrand	93	1	-18.8822
chr7	82181097	82181187	LINE	L1Md_F3	L1	chr7L1Md_F382181072	NonProperStrand	2	chr8	93941893	93941973	protein_coding	Fto	intron	ENSMUSG00000055932	ProperStrand	34	1	-19.7854
chr12	88507768	88507801	protein_coding	Tmed8	utr3	ENSMUSG00000034111	ProperStrand	22	chr13	9636396	9636413	protein_coding	Dip2c	exon	ENSMUSG00000048264	NonProperStrand	51	1	-15.6845
chr1	130397810	130397900	LINE	L1Md_T	L1	chr1L1Md_T130397461	NonProperStrand	1	chr14	34780586	34780676	protein_coding	Zfp488	utr3	ENSMUSG00000044519	ProperStrand	54	1	-inf
chr8	96704036	96704073	protein_coding	Mt1	exon	ENSMUSG00000031765	ProperStrand	92	chr13	21259940	21259978	tRNA	tRNA1000-LysTTT	.	1077233	ProperStrand	86	1	-11.7314
chr18	63238393	63238409	protein_coding	Fam38b	exon	ENSMUSG00000041482	NonProperStrand	50	chr4	131908299	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.6894
chr4	131908357	131908467	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr1	192829937	192829969	protein_coding	Mfsd7b	utr3	ENSMUSG00000066595	ProperStrand	6	6	-inf
chr10	31064529	31064619	protein_coding	Tpd52l1	intron	ENSMUSG00000000296	ProperStrand	4	chr13	51743608	51743688	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-12.5173
chr8	64017614	64028377	protein_coding	Palld	exon	ENSMUSG00000058056	NonProperStrand	125	chr3	123210854	123210978	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-0.9995
chr8	101872777	101872867	protein_coding	Cdh8	intron	ENSMUSG00000036510	ProperStrand	12	chr3	135957204	135957284	protein_coding	Bank1	intron	ENSMUSG00000037922	NonProperStrand	11	1	-19.9991
chr13	89831501	89831532	protein_coding	Vcan	exon	ENSMUSG00000021614	ProperStrand	17	chr16	23111391	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-5.7900
chr4	56910496	56910579	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	chr10	59280494	59280531	snoRNA	ENSMUSG00000077520_SNORA17	.	ENSMUSG00000077520	ProperStrand	1	1	-inf
chr2	21110896	21110913	protein_coding	Enkur	exon	ENSMUSG00000026679	ProperStrand	3	chr10	23506324	23506348	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-13.2984
chr6	125102578	125102594	protein_coding-noncoding	Iffo1	utr5	ENSMUSG00000038271	NonProperStrand	2	chr10	90432659	90432677	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	1	-18.0699
chr1	174210708	174210725	protein_coding	Igsf8	intron	ENSMUSG00000038034	ProperStrand	25	chr11	97642975	97643002	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.0636
chr8	28284906	28284987	protein_coding	Rab11fip1	exon	ENSMUSG00000031488	ProperStrand	8	chr10	107800720	107800810	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	1	-12.2023
chr7	142907740	142907790	protein_coding	Mki67	exon	ENSMUSG00000031004	ProperStrand	286	chr15	79908961	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-2.5698
chr16	33058914	33059004	protein_coding-noncoding	Rpl35a	utr5	ENSMUSG00000060636	ProperStrand	2	chr16	33058823	33058903	protein_coding	Rpl35a	exon	ENSMUSG00000060636	ProperStrand	33	1	-19.7718
chr3	131024097	131024197	protein_coding	Sgms2	utr3	ENSMUSG00000050931	ProperStrand	4	chr16	23110512	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-7.8518
chr16	3856860	3856879	protein_coding	Zfp174	utr3	ENSMUSG00000054939	NonProperStrand	166	chrX	34622906	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-1.4873
chr2	167836656	167836680	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	chr7	107463024	107463041	protein_coding	P4ha3	intron	ENSMUSG00000051048	NonProperStrand	29	1	-13.6046
chr4	129396340	129396367	protein_coding	Khdrbs1	exon	ENSMUSG00000028790	ProperStrand	22	chr14	77424372	77424388	protein_coding	9030625A04Rik	utr3	ENSMUSG00000044350	NonProperStrand	152	1	-13.4824
chr9	50676847	50676867	protein_coding	Ppp2r1b	intron	ENSMUSG00000032058	NonProperStrand	5	chr16	23110828	23110871	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr14	76247751	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	chr7	51505224	51505304	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	7	-5.5131
chr6	71896714	71896730	protein_coding	Polr1a	intron	ENSMUSG00000049553	NonProperStrand	25	chr11	6428123	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.8448
chr3	153933541	153933557	protein_coding	Slc44a5	utr3	ENSMUSG00000028360	NonProperStrand	33	chr5	103983890	103983956	protein_coding	Ptpn13	exon	ENSMUSG00000034573	ProperStrand	23	1	-16.3950
chr12	55419994	55420084	DNA	MER5A	MER1_type	chr12MER5A55419964	NonProperStrand	1	chr12	55419813	55419893	SINE	B3A	B2	chr12B3A55419744	NonProperStrand	1	1	-inf
chr3	152118872	152120876	protein_coding	Zzz3	exon	ENSMUSG00000039068	ProperStrand	26	chr11	97643010	97643090	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.9888
chr11	97023155	97023196	protein_coding	Kpnb1	utr3	ENSMUSG00000001440	ProperStrand	197	chr4	56819129	56819147	protein_coding	BC026590	utr3	ENSMUSG00000038827	NonProperStrand	50	1	-11.2958
chr7	137903158	137903203	protein_coding	Tacc2	intron	ENSMUSG00000030852	ProperStrand	95	chr6	113498417	113498863	protein_coding	Fancd2	exon	ENSMUSG00000034023	ProperStrand	65	1	-12.2292
chr3	33968341	33968441	protein_coding	Dnajc19	intron	ENSMUSG00000027679	NonProperStrand	4	chr7	118219575	118219621	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-9.7412
chr11	44338643	44344833	protein_coding	Rnf145	exon	ENSMUSG00000019189	ProperStrand	46	chr13	62944660	62944677	protein_coding	Fbp2	intron	ENSMUSG00000021456	ProperStrand	100	1	-12.8243
chr1	173341933	173341949	protein_coding	Usf1	utr5	ENSMUSG00000026641	NonProperStrand	144	chr9	78326620	78326766	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-4.6302
chr15	82686171	82725637	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	chr4	131908236	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	10	-0.7853
chr11	78325964	78327438	protein_coding	Poldip2	exon	ENSMUSG00000001100	ProperStrand	10	chr16	85795631	85795647	protein_coding	Adamts1	utr3	ENSMUSG00000022893	ProperStrand	102	1	-15.9005
chr13	70744834	70744853	protein_coding	BC018507	exon	ENSMUSG00000034525	ProperStrand	43	chr11	106362669	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-8.0708
chr2	18454404	18454494	LINE	L1Md_F2	L1	chr2L1Md_F218453726	NonProperStrand	1	chr5	35876867	35876957	LINE	L1_Mus1	L1	chr5L1_Mus135876231	NonProperStrand	1	1	-inf
chr19	10823569	10823587	protein_coding	A430093F15Rik	intron	ENSMUSG00000067577	NonProperStrand	34	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.3385
chr11	78903158	78903248	protein_coding	Ksr1	intron	ENSMUSG00000018334	ProperStrand	12	chr4	135470031	135470111	protein_coding	Cnr2	intron	ENSMUSG00000062585	ProperStrand	1	1	-inf
chr4	125389108	125389128	protein_coding	Grik3	utr3	ENSMUSG00000001985	ProperStrand	126	chr5	104283279	104283347	protein_coding	Aff1	utr3	ENSMUSG00000029313	ProperStrand	82	3	-inf
chr2	94261171	94261188	protein_coding	Api5	exon	ENSMUSG00000027193	NonProperStrand	2	chr16	56035873	56035938	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	1	-16.4660
chr8	82213213	82213240	protein_coding	Abce1	exon	ENSMUSG00000058355	ProperStrand	66	chr5	108336439	108336490	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-7.7858
chr4	131865855	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr13	49779667	49779804	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	19	-1.1962
chr14	25299088	25301692	protein_coding	Polr3a	exon	ENSMUSG00000025280	ProperStrand	11	chr10	23505221	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.1476
chr10	75761420	75761510	protein_coding	Dip2a	exon	ENSMUSG00000020231	ProperStrand	25	chr9	120039587	120039667	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-4.9793
chr2	18598170	18598187	Low_complexity	GC_rich	Low_complexity	chr2GC_rich18598144	ProperStrand	1	chr1	59539683	59539700	protein_coding	Fzd7	utr5	ENSMUSG00000041075	ProperStrand	373	1	-inf
chr18	77392863	77392883	protein_coding	Pias2	utr3	ENSMUSG00000025423	NonProperStrand	2	chr2	158185531	158185570	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-13.9286
chr12	77415431	77415483	protein_coding	Mthfd1	exon	ENSMUSG00000021048	ProperStrand	71	chr19	8963087	8963187	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-3.6179
chr2	84443835	84443871	protein_coding	Ctnnd1	exon	ENSMUSG00000034101	ProperStrand	26	chr5	30790882	30790898	protein_coding	Cib4	exon	ENSMUSG00000053194	ProperStrand	31	1	-16.3145
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr11	35380172	35380189	protein_coding	Slit3	intron	ENSMUSG00000056427	ProperStrand	61	1	-8.8935
chr7	73547011	73550866	protein_coding	Aldh1a3	exon	ENSMUSG00000015134	NonProperStrand	4	chr7	70796256	70796272	protein_coding	Otud7a	intron	ENSMUSG00000033510	ProperStrand	16	1	-21.9369
chr2	156218301	156218382	protein_coding	2900097C17Rik	exon	ENSMUSG00000067833	ProperStrand	7	chr16	23110967	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-12.9875
chr2	25078323	25078388	protein_coding	Tubb4b	exon	ENSMUSG00000036752	ProperStrand	58	chrX	84483704	84483755	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	2	-13.2522
chr18	38115489	38115505	protein_coding	Rell2	utr5	ENSMUSG00000044024	ProperStrand	1	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-inf
chr16	11144205	11144250	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr3	54703223	54703239	protein_coding	6030405A18Rik	exon	ENSMUSG00000056306	ProperStrand	4	1	-16.1306
chr14	56329805	56329847	protein_coding	Tgm1	exon	ENSMUSG00000022218	ProperStrand	12	chr19	8800355	8800445	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-6.6789
chr8	129458215	129458315	protein_coding	Tomm20	utr3	ENSMUSG00000058779	ProperStrand	55	chr4	131908809	131908870	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.3443
chr7	51503462	51503524	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	chr5	73563222	73563238	protein_coding	Fryl	intron	ENSMUSG00000070733	ProperStrand	173	1	-6.5103
chr17	30729945	30730035	protein_coding	Glo1	utr3	ENSMUSG00000024026	ProperStrand	75	chr3	123210851	123210931	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	29	-inf
chr19	44079677	44079693	protein_coding	Cyp2c44	utr3	ENSMUSG00000025197	NonProperStrand	21	chr2	139504270	139504288	protein_coding	Ism1	utr5	ENSMUSG00000074766	ProperStrand	8	1	-18.5220
chr1	88379936	88380016	LTR	MTA_Mm	MaLR	chr1MTA_Mm88379957	ProperStrand	1	chr1	88379739	88379829	SINE	ID_B1	B4	chr1ID_B188379752	NonProperStrand	1	1	-inf
chr6	34895635	34895652	protein_coding	2010107G12Rik	utr3	ENSMUSG00000029847	ProperStrand	2	chr19	8963125	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-9.4105
chr19	44188380	44188470	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr9	64023677	64023746	snoRNA	ENSMUSG00000064918_SNORD18	.	ENSMUSG00000064918	ProperStrand	370	8	-20.1859
chr15	7114619	7114651	protein_coding	Lifr	exon	ENSMUSG00000054263	ProperStrand	64	chr1	162965548	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.1593
chr16	38030277	38030367	SINE	B1_Mur4	Alu	chr16B1_Mur438030260	NonProperStrand	1	chr16	38030065	38030155	SINE	B1_Mus2	Alu	chr16B1_Mus238030050	ProperStrand	1	1	-inf
chr4	86231334	86231691	protein_coding	Haus6	exon	ENSMUSG00000038047	ProperStrand	21	chr4	131908236	131908286	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-5.4868
chr8	98278871	98278961	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	chr5	90657841	90657868	protein_coding	Ankrd17	utr3	ENSMUSG00000055204	ProperStrand	77	1	-9.4895
chr9	20537334	20537424	LTR	MT2A	ERVL	chr9MT2A20537263	ProperStrand	1	chr9	20537159	20537239	SINE	B1F	Alu	chr9B1F20537155	NonProperStrand	1	1	-inf
chr15	66460490	66460521	protein_coding	Phf20l1	exon	ENSMUSG00000072501	ProperStrand	13	chr11	69483136	69483194	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-5.3217
chr2	158185528	158185666	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr17	24857716	24857853	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	52	-19.8112
chr16	48994322	48994390	protein_coding	C330027C09Rik	utr5	ENSMUSG00000033031	ProperStrand	30	chr18	73693111	73693138	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	2	-11.1376
chr8	125627810	125627832	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	chr1	161270487	161270554	snoRNA	ENSMUSG00000089536_Scarna3a	.	ENSMUSG00000089536	ProperStrand	247	2	-12.4311
chr16	32243849	32243939	snoRNA	ENSMUSG00000080440_SNORA79	.	ENSMUSG00000080440	ProperStrand	140	chr5	130300473	130300553	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.1977
chr19	30210998	30211023	protein_coding	Gldc	exon	ENSMUSG00000024827	ProperStrand	175	chr5	122919723	122919813	protein_coding	Atp2a2	exon	ENSMUSG00000029467	ProperStrand	166	1	-9.1260
chr11	67005924	67005940	protein_coding	Myh2	exon	ENSMUSG00000033196	ProperStrand	66	chr5	121655100	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.5709
chr6	85412092	85412182	protein_coding	Cct7	exon	ENSMUSG00000030007	ProperStrand	173	chr18	35716700	35716780	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-0.6975
chr2	32818803	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	chr18	35714143	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	24	-4.9915
chr8	12657505	12657595	protein_coding	Tubgcp3	exon	ENSMUSG00000000759	ProperStrand	16	chr5	54044661	54044736	protein_coding	Rbpj	exon	ENSMUSG00000039191	ProperStrand	96	1	-15.0550
chr17	34163935	34164015	processed_transcript	Gm20427	.	ENSMUSG00000092595	ProperStrand	20	chr17	34163797	34163888	protein_coding	H2-Ke6	exon	ENSMUSG00000073422	ProperStrand	22	20	-inf
chr19	46022236	46022252	protein_coding	9130011E15Rik	intron	ENSMUSG00000039901	ProperStrand	129	chr9	64023228	64023274	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	1	-6.9213
chr14	117706272	117706292	protein_coding	Gpc6	intron	ENSMUSG00000058571	NonProperStrand	31	chr16	23110455	23110526	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.6461
chr7	148141763	148141781	protein_coding	Ifitm2	exon	ENSMUSG00000060591	ProperStrand	25	chr9	120038467	120038547	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	3	-11.2442
chr12	111893647	111893711	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr4	116991019	116991036	protein_coding	Rnf220	intron	ENSMUSG00000028677	ProperStrand	131	1	-6.9975
chr11	69234364	69266829	protein_coding	Dnahc2	exon	ENSMUSG00000005237	ProperStrand	95	chr16	23110836	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-1.0457
chr15	102239617	102239636	protein_coding	Sp1	exon	ENSMUSG00000001280	ProperStrand	124	chr15	98350146	98350283	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	2	-5.7890
chr1	135519601	135519691	protein_coding	Zc3h11a	exon	ENSMUSG00000026464	ProperStrand	102	chr7	117189991	117190027	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-4.2425
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr13	73957692	73957709	protein_coding	Nkd2	utr3	ENSMUSG00000021567	NonProperStrand	10	1	-11.4509
chr11	97698250	97698370	protein_coding	Lasp1	utr3	ENSMUSG00000038366	ProperStrand	65	chr5	130300432	130300471	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.3733
chr4	126559848	126566767	protein_coding	Zmym4	exon	ENSMUSG00000042446	ProperStrand	94	chr16	23111450	23111495	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.7075
chr14	76247711	76247768	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	chr7	52381972	52382012	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	5	-0.8916
chr4	135607192	135607593	protein_coding	Rpl11	exon	ENSMUSG00000059291	ProperStrand	152	chr5	121655032	121655112	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.1115
chr11	117729369	117729386	protein_coding	Tha1	utr3	ENSMUSG00000017713	NonProperStrand	56	chr16	23111429	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-5.8002
chr7	109149271	109149287	protein_coding	Numa1	exon	ENSMUSG00000066306	NonProperStrand	171	chr8	32260372	32260423	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-2.7023
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr9	29672403	29672419	protein_coding	Ntm	intron	ENSMUSG00000059974	ProperStrand	49	1	-9.3114
chr5	103854542	103891155	protein_coding	Ptpn13	utr5	ENSMUSG00000034573	NonProperStrand	74	chr9	15118323	15118346	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.0858
chr11	60015750	60016311	protein_coding	Srebf1	exon	ENSMUSG00000020538	ProperStrand	24	chr10	40079395	40079412	protein_coding	Cdk19	intron	ENSMUSG00000038481	ProperStrand	34	1	-16.2659
chr14	76247712	76247802	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	chr9	40612076	40612144	snoRNA	ENSMUSG00000075924_Snord14d	.	ENSMUSG00000075924	ProperStrand	131	1	-2.7460
chr4	136876773	136876861	protein_coding	Cdc42	utr3	ENSMUSG00000006699	ProperStrand	38	chr11	62418013	62418084	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-6.4584
chr2	90235285	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	74494095	74494111	protein_coding	Evx2	exon	ENSMUSG00000001815	NonProperStrand	3	1	-10.7414
chr9	83758619	83758671	protein_coding	Ttk	intron	ENSMUSG00000038379	ProperStrand	36	chr9	15119298	15119388	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-6.1113
chr19	32464273	32464289	lincRNA	2700046G09Rik	exon	ENSMUSG00000024893	ProperStrand	59	mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	1	-5.9366
chr10	75322867	75322899	protein_coding	Mif	exon	ENSMUSG00000033307	ProperStrand	146	chr11	69481332	69481410	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	3	-4.8344
chr17	56209205	56209279	protein_coding-noncoding	Ubxn6	utr3	ENSMUSG00000019578	ProperStrand	4	chr11	29398474	29398564	protein_coding	Ccdc88a	exon	ENSMUSG00000032740	ProperStrand	12	1	-21.0614
chr2	129998643	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr7	26472435	26472451	protein_coding	Tgfb1	utr5	ENSMUSG00000002603	NonProperStrand	154	1	-6.2397
chr9	95525011	95525035	antisense	Gm16126	.	ENSMUSG00000086585	NonProperStrand	229	chr14	20608947	20609511	protein_coding	Nid2	exon	ENSMUSG00000021806	ProperStrand	372	1	-6.9886
chr8	113208321	113208379	protein_coding	Vac14	intron	ENSMUSG00000010936	ProperStrand	27	chr8	13416897	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-8.0511
chr2	179322380	179322401	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr7	112789955	112790087	protein_coding	Fxc1	utr3	ENSMUSG00000089847	ProperStrand	2	1	-18.6606
chr10	126642821	126642839	protein_coding	Pip4k2c	exon	ENSMUSG00000025417	NonProperStrand	1	chr7	30066593	30066641	protein_coding	Spint2	utr5	ENSMUSG00000074227	ProperStrand	82	1	-inf
chr12	77721798	77721848	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	chr12	60235099	60235180	snoRNA	ENSMUSG00000077505_SNORA26	.	ENSMUSG00000077505	ProperStrand	82	2	-13.9966
chr15	95050371	95050387	protein_coding	Nell2	utr3	ENSMUSG00000022454	ProperStrand	64	chr13	45015880	45015904	protein_coding	Jarid2	utr3	ENSMUSG00000038518	ProperStrand	372	1	-9.5287
chr17	32475079	32475116	protein_coding	Akap8l	intron	ENSMUSG00000002625	ProperStrand	10	chr8	10924953	10924970	protein_coding	3930402G23Rik	utr3	ENSMUSG00000038917	ProperStrand	13	1	-22.1951
chr11	116535487	116535982	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr15	82980124	82980225	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	2	-1.4416
chr18	57400307	57400324	protein_coding	Megf10	exon	ENSMUSG00000024593	ProperStrand	143	chr1	162966209	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-5.8592
chr2	9907430	9907449	protein_coding	Taf3	intron	ENSMUSG00000025782	NonProperStrand	4	chr11	68853920	68853960	tRNA	tRNA396-ProCGG	.	1932452	ProperStrand	48	1	-18.8877
chrX	12778474	12778492	LTR	RMER12	ERVK	chrXRMER1212778354	NonProperStrand	1	chr11	6428099	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-inf
chr17	57166265	57166281	protein_coding	Khsrp	exon	ENSMUSG00000007670	NonProperStrand	4	chr6	124665248	124665310	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	1	-12.5925
chr14	33053885	33053975	protein_coding	Parg	intron	ENSMUSG00000021911	ProperStrand	33	chr14	33268679	33268759	protein_coding	Chat	intron	ENSMUSG00000021919	NonProperStrand	3	1	-20.0264
chr6	51413102	51413160	protein_coding	Hnrnpa2b1	utr3	ENSMUSG00000004980	ProperStrand	166	chr2	41199972	41199989	protein_coding	Lrp1b	exon	ENSMUSG00000049252	ProperStrand	376	2	-12.1637
chr5	108761730	108761747	protein_coding	Pigg	exon	ENSMUSG00000029263	ProperStrand	11	chr9	15119661	15119761	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.8656
chr16	57183077	57183098	protein_coding	Tbc1d23	exon	ENSMUSG00000022749	ProperStrand	6	chr4	131908236	131908332	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-18.3365
chr7	31895791	31899711	protein_coding	Hpn	utr5	ENSMUSG00000001249	ProperStrand	126	chr7	52713958	52714023	protein_coding	Ftl1	exon	ENSMUSG00000050708	ProperStrand	807	1	-6.6421
chr5	75473198	75473215	protein_coding	Gsx2	utr3	ENSMUSG00000035946	ProperStrand	307	chr17	39985385	39985444	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-2.8561
chr2	37403804	37403882	protein_coding	Rabgap1	intron	ENSMUSG00000035437	ProperStrand	20	chr10	23505152	23505199	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.0137
chr1	24621336	24621417	protein_coding	Gm10925	utr3	ENSMUSG00000090378	ProperStrand	320	chr7	86611353	86611379	tRNA	tRNA387-ArgTCG	.	150372	ProperStrand	77	1	-9.4581
chr12	80334701	80334756	protein_coding	Zfyve26	utr3	ENSMUSG00000066440	ProperStrand	44	chr14	96988125	96988181	snoRNA	ENSMUSG00000064581_SNORA30	.	ENSMUSG00000064581	ProperStrand	146	1	-12.1552
chr5	117447872	117447952	LTR	MTE2b	MaLR	chr5MTE2b117447881	ProperStrand	1	chr5	117448002	117448092	SINE	B2_Mm2	B2	chr5B2_Mm2117447988	ProperStrand	1	1	-inf
chr5	100855902	100855943	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr7	52381720	52381761	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-1.4357
chr6	142978112	142978155	protein_coding	5730419I09Rik	exon	ENSMUSG00000030279	ProperStrand	81	chr18	35714176	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	4	-10.0946
chr11	53140874	53144205	protein_coding	Zcchc10	exon	ENSMUSG00000018239	ProperStrand	5	chr16	23111451	23111502	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-14.5684
chr2	153500690	153501474	protein_coding	Dnmt3b	exon	ENSMUSG00000027478	ProperStrand	19	chr11	77995190	77995235	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-8.4897
chr11	115255068	115255168	protein_coding	Cdr2l	exon	ENSMUSG00000050910	ProperStrand	9	chr6	97112810	97112855	snoRNA	ENSMUSG00000065728_SNORA36	.	ENSMUSG00000065728	ProperStrand	158	1	-15.2477
chr6	54319085	54319102	lincRNA	9130019P16Rik	intron	ENSMUSG00000073067	ProperStrand	255	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-4.8974
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr7	4462075	4462093	protein_coding	Tnnt1	intron	ENSMUSG00000064179	ProperStrand	19	1	-11.1198
chr5	53158874	53158974	protein_coding	Pi4k2b	exon	ENSMUSG00000029186	ProperStrand	27	chr7	29136636	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	6	-19.5267
chr1	172668643	172668704	protein_coding	Atf6	intron	ENSMUSG00000026663	ProperStrand	35	chr11	97642957	97642985	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.4316
chr7	16534823	16534839	protein_coding	Ehd2	utr3	ENSMUSG00000074364	NonProperStrand	197	chr7	116663633	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	6	-6.8683
chr6	85412168	85414783	protein_coding	Cct7	exon	ENSMUSG00000030007	ProperStrand	173	chr1	162966001	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-1.7819
chr15	77604421	77605015	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr1	72898693	72898715	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	1	-5.0364
chr2	162915296	162915315	LTR	RLTR11B	ERVK	chr2RLTR11B162915116	ProperStrand	29	chr5	121655100	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.1397
chr6	86619040	86619056	protein_coding	Mxd1	utr5	ENSMUSG00000001156	NonProperStrand	40	chr15	12763849	12763949	protein_coding	Drosha	exon	ENSMUSG00000022191	ProperStrand	163	1	-12.1264
chr11	67167096	67167112	protein_coding	Myh13	exon	ENSMUSG00000060180	ProperStrand	145	chr9	15118257	15118321	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-1.9419
chr9	44207414	44207505	protein_coding	Slc37a4	exon	ENSMUSG00000032114	ProperStrand	23	chr7	29136535	29136656	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	17	-19.5732
chr18	35716730	35716831	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	chr5	31190925	31190968	tRNA	tRNA110-AlaAGC	.	215398	ProperStrand	16	6	-21.1497
chr6	115757992	115758095	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr2	130101238	130101311	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	3	-1.1962
chr19	7099892	7100787	protein_coding	Stip1	exon	ENSMUSG00000024966	ProperStrand	100	chr15	98350193	98350283	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	2	-6.3994
chr2	146794877	146794895	protein_coding	Plk1s1	intron	ENSMUSG00000074749	NonProperStrand	4	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-11.5063
chr9	106869440	106869457	protein_coding	Dock3	exon	ENSMUSG00000039716	ProperStrand	24	chr19	8798484	8798501	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-7.0265
chr18	65521576	65521595	protein_coding	Alpk2	intron	ENSMUSG00000032845	NonProperStrand	3	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-16.8120
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr4	116230385	116230401	protein_coding	Gpbp1l1	utr5	ENSMUSG00000034042	NonProperStrand	106	1	-4.7968
chr5	114292891	114292961	protein_coding	Coro1c	utr3	ENSMUSG00000004530	ProperStrand	44	chr10	23506290	23506315	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	2	-12.1289
chr8	61858707	61858726	LTR	RMER13B	ERVK	chr8RMER13B61858589	NonProperStrand	22	chr18	57514476	57514499	protein_coding	Prrc1	utr5	ENSMUSG00000024594	NonProperStrand	22	1	-17.2821
chr6	55002210	55003128	protein_coding	Gars	exon	ENSMUSG00000029777	ProperStrand	71	chr5	130300462	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.2256
chr2	179936690	179936728	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr4	149033963	149034142	protein_coding	Pik3cd	exon	ENSMUSG00000039936	ProperStrand	151	7	-19.9258
chr7	29689669	29741531	protein_coding	Actn4	intron	ENSMUSG00000054808	ProperStrand	120	chr10	23505165	23505270	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-1.7798
chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	chr11	77967785	77967836	protein_coding	BC017647	exon	ENSMUSG00000037750	ProperStrand	19	1	-12.8096
chr3	33713610	33713626	protein_coding	Ccdc39	exon	ENSMUSG00000027676	ProperStrand	106	chr1	89673566	89673634	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-2.2697
chr1	91787413	91787501	protein_coding	Agap1	utr3	ENSMUSG00000055013	ProperStrand	229	chr11	77995189	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-3.6142
chr5	92726153	92726186	protein_coding	Sdad1	exon	ENSMUSG00000029415	ProperStrand	63	chr1	162967512	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-3.3850
chr12	112779147	112779173	protein_coding	Eif5	intron	ENSMUSG00000021282	ProperStrand	125	chr16	96391551	96391613	protein_coding	Lca5l	intron	ENSMUSG00000045275	NonProperStrand	210	1	-9.3287
chr2	58018139	58018156	antisense	Gm13546	.	ENSMUSG00000086862	ProperStrand	3	chr19	8800084	8800104	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-13.9709
chr7	20218956	20218974	protein_coding	Clptm1	utr3	ENSMUSG00000002981	NonProperStrand	2	chr3	153574630	153574654	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	1	-17.1863
chr2	52994196	52994285	protein_coding	Prpf40a	utr3	ENSMUSG00000061136	ProperStrand	129	chr12	17552948	17553028	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	2	-6.1581
chr2	13902994	13903010	protein_coding	Ptpla	intron	ENSMUSG00000063275	NonProperStrand	5	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-6.5022
chr13	97256856	97259148	protein_coding	Polk	exon	ENSMUSG00000021668	ProperStrand	16	chr9	120039583	120039663	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-5.8660
chr9	15120998	15121088	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	chr7	52381718	52381808	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-4.0688
chr9	65044377	65044439	snRNA	ENSMUSG00000075763_U5	.	ENSMUSG00000075763	ProperStrand	216	chr7	117189982	117190051	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-1.2424
chr13	101555774	101555854	protein_coding	Ccnb1	exon	ENSMUSG00000041431	ProperStrand	39	chr11	121485426	121485516	protein_coding	B3gntl1	exon	ENSMUSG00000046605	ProperStrand	4	1	-18.5776
chr11	116535503	116535534	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr16	48319003	48319054	protein_coding	Dppa2	utr3	ENSMUSG00000072419	ProperStrand	9	2	-15.5806
chr15	82725591	82725636	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	chr4	116862563	116862663	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	2	-6.9374
chr7	16524518	16524807	protein_coding	Gltscr2	exon	ENSMUSG00000041560	ProperStrand	127	chr1	155287318	155287355	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	1	-7.4826
chr9	78215688	78215835	protein_coding	Dppa5a	exon	ENSMUSG00000060461	ProperStrand	79	chr2	26768393	26768433	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-5.0660
chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	chr11	106362303	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	2	-5.1442
chr15	85166800	85166870	protein_coding	Atxn10	utr5	ENSMUSG00000016541	ProperStrand	96	chr9	15130858	15130897	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	1	-8.2728
chr14	99434573	99434601	protein_coding	Mzt1	utr3	ENSMUSG00000033186	ProperStrand	6	chr18	35716754	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-6.6008
chr11	68847085	68847134	protein_coding	1500010J02Rik	intron	ENSMUSG00000020898	ProperStrand	38	chr18	36912026	36912074	protein_coding	Ik	exon	ENSMUSG00000024474	ProperStrand	60	2	-inf
chr2	158182222	158182298	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	chr11	69482352	69482399	snoRNA	ENSMUSG00000089542_snoU6-77	.	ENSMUSG00000089542	ProperStrand	138	3	-8.5366
chr11	87913128	87913145	processed_transcript	2210416O15Rik	.	ENSMUSG00000087498	ProperStrand	76	chr5	121655126	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.3123
chrX	72351616	72351706	protein_coding	Dkc1	exon	ENSMUSG00000031403	ProperStrand	89	chr9	120039587	120039667	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.6179
chr11	80216390	80216433	protein_coding-noncoding	Zfp207	utr5	ENSMUSG00000017421	ProperStrand	1	chr11	68886928	68887036	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-inf
chr13	112476527	112476543	protein_coding	Mier3	utr5	ENSMUSG00000032727	NonProperStrand	14	chr4	131908810	131908869	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.6665
chr16	16006801	16006891	protein_coding	2310008H04Rik	intron	ENSMUSG00000041974	NonProperStrand	3	chr2	114419780	114419870	protein_coding	Atpbd4	intron	ENSMUSG00000057147	ProperStrand	9	1	-inf
chr14	106295675	106295704	protein_coding	Spry2	intron	ENSMUSG00000022114	ProperStrand	22	chr9	120038495	120038585	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	3	-11.7784
chr2	146125208	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	chr15	57978244	57978297	snoRNA	ENSMUSG00000080461_SNORA11	.	ENSMUSG00000080461	ProperStrand	171	1	-8.9667
chr14	12388306	12388324	protein_coding	Ptprg	intron	ENSMUSG00000021745	ProperStrand	72	chr17	23955821	23955838	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	1	-11.1078
chrX	71533839	71534003	protein_coding	Taz	exon	ENSMUSG00000009995	ProperStrand	59	chr19	8963086	8963181	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.3030
chr15	97871684	97906245	protein_coding	Senp1	exon	ENSMUSG00000033075	ProperStrand	24	chr19	8799830	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	4	-20.5845
chr17	35299520	35299620	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	chr4	41150095	41150133	snoRNA	ENSMUSG00000089265_SNORD121A	.	ENSMUSG00000089265	ProperStrand	370	1	-1.5763
chr15	57769567	57769584	protein_coding	Wdr67	exon	ENSMUSG00000022364	ProperStrand	11	chr6	30162058	30162074	protein_coding	Ube2h	utr3	ENSMUSG00000039159	ProperStrand	96	1	-15.8203
chr1	63225250	63225273	protein_coding	Eef1b2	intron	ENSMUSG00000025967	ProperStrand	106	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-7.8419
chr12	17552948	17553090	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr18	35714144	35714288	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	49	-inf
chr18	35413381	35413481	protein_coding	Ctnna1	exon	ENSMUSG00000037815	ProperStrand	115	chr4	130305566	130305612	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	1	-8.6065
chr12	86621224	86621339	protein_coding	Acyp1	utr5	ENSMUSG00000008822	ProperStrand	6	chr8	114522501	114522526	protein_coding	Kars	exon	ENSMUSG00000031948	ProperStrand	89	4	-20.1883
chr4	107108276	107108297	protein_coding	Glis1	utr5	ENSMUSG00000034762	ProperStrand	14	chr15	79908958	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-8.3920
chr4	53873596	53873646	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	chr19	8798484	8798550	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-1.4491
chr5	129526810	129526863	protein_coding	Ran	exon	ENSMUSG00000029430	ProperStrand	82	chr17	36000485	36000501	protein_coding	Nrm	exon	ENSMUSG00000059791	ProperStrand	253	1	-9.8009
chr11	48617398	48617685	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	chr4	116250277	116250349	protein_coding	Gpbp1l1	intron	ENSMUSG00000034042	ProperStrand	12	1	-13.0814
chr7	35983752	35983768	protein_coding	Slc7a10	exon	ENSMUSG00000030495	NonProperStrand	33	chr18	75160709	75160737	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	1	-10.3930
chr3	120862980	120863080	protein_coding	Rwdd3	intron	ENSMUSG00000028133	ProperStrand	3	chr1	162967514	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-9.6828
chr1	82735933	82735967	protein_coding	Mff	intron	ENSMUSG00000026150	ProperStrand	12	chr7	52378401	52378481	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	1	-11.7822
chr3	33960936	33963113	protein_coding	Fxr1	exon	ENSMUSG00000027680	ProperStrand	58	chr18	35714145	35714225	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-3.5052
chr8	73883540	73883567	protein_coding	Myo9b	exon	ENSMUSG00000004677	ProperStrand	78	chr18	35102297	35102340	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-6.0721
chr3	91044644	91044734	LINE	L1Md_T	L1	chr3L1Md_T91043695	NonProperStrand	1	chr7	126005954	126006034	protein_coding	Iqck	intron	ENSMUSG00000073856	NonProperStrand	4	1	-inf
chr10	127428422	127428438	protein_coding	Hsd17b6	exon	ENSMUSG00000025396	NonProperStrand	68	chr7	117189863	117189943	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	2	-9.7006
chr17	24665420	24665469	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	chr16	43886793	43886818	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	5	-4.7742
chr13	76579096	76579115	protein_coding	Mctp1	intron	ENSMUSG00000021596	NonProperStrand	13	chr9	108362930	108362946	protein_coding	Ccdc71	utr5	ENSMUSG00000049305	ProperStrand	4	1	-20.8300
chr3	104598356	104598793	protein_coding	Mov10	exon	ENSMUSG00000002227	ProperStrand	96	chr10	59644411	59644434	protein_coding	Chst3	utr3	ENSMUSG00000057337	NonProperStrand	4	3	-20.6019
chr11	70463017	70463204	protein_coding	Rnf167	exon	ENSMUSG00000040746	ProperStrand	10	chrX	152009278	152009294	protein_coding	Ptchd1	exon	ENSMUSG00000041552	NonProperStrand	294	1	-13.7939
chr4	132530097	132530117	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	chr14	33005037	33005139	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	3	-3.1040
chr1	140383444	140383469	protein_coding	Nek7	utr3	ENSMUSG00000026393	ProperStrand	10	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-9.4968
mmu-miR-6238	2	19	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr7	118219574	118219688	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	6	-11.2390
chr18	61799413	61804827	SINE	B3A	B2	chr18B3A61804778	NonProperStrand	1	chr4	131908356	131908406	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-inf
chr3	88373118	88373135	protein_coding	Ubqln4	utr3	ENSMUSG00000008604	ProperStrand	49	chr12	77967654	77967670	protein_coding	Fntb	intron	ENSMUSG00000033373	NonProperStrand	8	1	-17.9000
chr10	106825141	106825157	protein_coding	Lin7a	intron	ENSMUSG00000019906	NonProperStrand	13	chr8	129458787	129458838	protein_coding	Tomm20	utr3	ENSMUSG00000058779	ProperStrand	55	1	-16.6086
chr7	123247846	123247900	protein_coding	1110004F10Rik	exon	ENSMUSG00000030663	ProperStrand	15	chr7	52382014	52382037	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-9.5115
chr2	129033599	129033766	protein_coding	Slc20a1	exon	ENSMUSG00000027397	ProperStrand	81	chr17	35299547	35299637	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-4.2041
chr14	33349683	33349727	protein_coding	Ercc6	intron	ENSMUSG00000054051	ProperStrand	19	chr17	24857733	24857823	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.3961
chr9	8023614	8023657	protein_coding	9230110C19Rik	intron	ENSMUSG00000053070	ProperStrand	4	chr18	35714144	35714259	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-8.9582
chr3	94814576	94814605	protein_coding	Zfp687	exon	ENSMUSG00000019338	ProperStrand	32	chr18	35062805	35062886	protein_coding	Etf1	utr3	ENSMUSG00000024360	ProperStrand	74	4	-20.7941
chr7	31229452	31230383	protein_coding	Aplp1	exon	ENSMUSG00000006651	ProperStrand	29	chr16	23111389	23111479	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.3903
chr15	75895496	75895650	protein_coding	Scrib	exon	ENSMUSG00000022568	ProperStrand	154	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-5.1331
chr18	32283397	32283413	protein_coding	Proc	exon	ENSMUSG00000024386	NonProperStrand	4	chr4	126703460	126704050	protein_coding	Sfpq	exon	ENSMUSG00000028820	ProperStrand	340	1	-15.5302
chr5	120288899	120288916	protein_coding	Tbx5	intron	ENSMUSG00000018263	NonProperStrand	5	chrX	34622958	34623023	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-8.1517
chr16	87966312	87966331	protein_coding	Grik1	intron	ENSMUSG00000022935	NonProperStrand	20	chr8	88402142	88403621	protein_coding	Phkb	exon	ENSMUSG00000036879	ProperStrand	25	1	-17.2438
chr9	120037903	120037987	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	chr9	64023232	64023322	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	1	-0.7315
chr7	63059399	63059417	protein_coding	Tubgcp5	intron	ENSMUSG00000033790	NonProperStrand	2	chr14	119291598	119291621	protein_coding	Dzip1	intron	ENSMUSG00000042156	NonProperStrand	5	1	-21.6030
chr8	13416897	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr13	23528224	23528284	tRNA	tRNA103-LysCTT	.	682632	ProperStrand	180	2	-7.2012
chr17	35283001	35283060	protein_coding	Bag6	exon	ENSMUSG00000024392	ProperStrand	181	chr16	23111777	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-1.0809
chr19	8798775	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	chr2	144091714	144091814	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	ProperStrand	549	1	-1.0489
chr11	14961829	14961849	LINE	Lx	L1	chr11Lx14961726	ProperStrand	93	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.1370
chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	chr11	87240289	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	2	-11.6579
chr8	35892234	35892310	protein_coding	Tnks	utr3	ENSMUSG00000031529	ProperStrand	37	chr17	13112530	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-5.5188
chr5	142983015	142983031	protein_coding	Radil	exon	ENSMUSG00000029576	ProperStrand	4	chr10	23505152	23505209	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-6.2798
chr2	118925518	118926490	protein_coding	Casc5	exon	ENSMUSG00000027326	ProperStrand	30	chr18	35714165	35714245	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.7548
chr11	55302620	55302667	protein_coding	G3bp1	exon	ENSMUSG00000018583	ProperStrand	106	chr11	84042523	84045163	protein_coding	Acaca	exon	ENSMUSG00000020532	ProperStrand	100	1	-11.1439
chr19	46392483	46392508	protein_coding	Psd	intron	ENSMUSG00000037126	ProperStrand	3	chr4	131908313	131908345	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-7.2242
chr10	79695112	79695212	protein_coding	Mum1	exon	ENSMUSG00000020156	ProperStrand	19	chr16	23110988	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7016
chr2	129004103	129004121	antisense	AI847159	.	ENSMUSG00000084826	NonProperStrand	63	chr2	26494708	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.0195
chr14	76247664	76247754	protein_coding	Tpt1	intron	ENSMUSG00000060126	ProperStrand	236	chr18	35716764	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	6	-4.7662
chr5	83799681	83799761	LTR	MTB-int	MaLR	chr5MTB-int83799069	NonProperStrand	1	chr5	83800039	83800129	LTR	MTB	MaLR	chr5MTB83799873	NonProperStrand	1	1	-inf
chr13	11685404	11685420	protein_coding	Ryr2	exon	ENSMUSG00000021313	ProperStrand	61	chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-7.7066
chr7	147838192	147838208	protein_coding	Olfr53	exon	ENSMUSG00000066123	NonProperStrand	2	chr16	23111386	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-8.0851
chr1	134997451	134997954	protein_coding	Pik3c2b	exon	ENSMUSG00000026447	ProperStrand	24	chr7	116663702	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.1859
chr4	155124309	155124327	protein_coding	Atad3a	exon	ENSMUSG00000029036	ProperStrand	28	chr7	117189992	117190059	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.7726
chr10	80737414	80737483	protein_coding	Tjp3	exon	ENSMUSG00000034917	NonProperStrand	3	chrX	34622906	34622991	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	NonProperStrand	26	2	-20.3450
chr15	60661082	60661099	lincRNA	9930014A18Rik	exon	ENSMUSG00000044513	ProperStrand	54	chr19	8798740	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-5.0048
chr7	133792950	133804614	protein_coding	Ccdc101	utr5	ENSMUSG00000030714	ProperStrand	3	chr8	129468777	129468857	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-10.6897
chr7	107789106	107789123	protein_coding	Rab6a	utr3	ENSMUSG00000030704	ProperStrand	23	chr11	97642952	97643075	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	4	-13.8080
chr12	110113493	110113878	protein_coding	Wars	exon	ENSMUSG00000021266	ProperStrand	12	chr10	23505251	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.9771
chr5	102246894	102246910	protein_coding	Cds1	exon	ENSMUSG00000029330	ProperStrand	9	chr9	78328222	78328330	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-10.1948
chr11	76541494	76541581	protein_coding	Gosr1	utr3	ENSMUSG00000010392	ProperStrand	9	chr17	24857717	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	7	-19.0187
chr18	38409775	38409791	lincRNA	1700086O06Rik	exon	ENSMUSG00000086988	NonProperStrand	28	chr9	15119631	15119657	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.0206
chr17	25099413	25099430	protein_coding	Cramp1l	utr3	ENSMUSG00000038002	ProperStrand	22	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-7.2021
chr17	25399392	25399413	protein_coding	Ube2i	exon	ENSMUSG00000015120	ProperStrand	20	chr16	23111376	23111445	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.0472
chr12	36219400	36219416	protein_coding	Ahr	utr5	ENSMUSG00000019256	NonProperStrand	64	chr18	75160711	75160777	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	1	-9.0583
chrX	47961742	47961871	lincRNA	6720401G13Rik	intron	ENSMUSG00000085396	ProperStrand	34	chr18	33954845	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-4.5779
chr17	24857364	24857545	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr16	23109026	23109093	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	2	-6.3144
chr14	72301755	72301771	SINE	B4	B4	chr14B472301692	NonProperStrand	99	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.0559
chrX	99380436	99380849	protein_coding	Rps4x	exon	ENSMUSG00000031320	ProperStrand	139	chr4	131908240	131908346	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-0.9896
chr4	56829946	56830008	protein_coding	Ctnnal1	exon	ENSMUSG00000038816	ProperStrand	18	chr16	23109052	23109090	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	5	-19.3392
chr13	33570538	33570618	LINE	L1Md_T	L1	chr13L1Md_T33569841	NonProperStrand	1	chr7	110699233	110699323	protein_coding	Olfr613	utr5	ENSMUSG00000078624	ProperStrand	16	1	-inf
chr17	23952975	23953044	protein_coding	Srrm2	exon	ENSMUSG00000039218	ProperStrand	521	chr15	73584131	73584229	protein_coding	Ptp4a3	intron	ENSMUSG00000059895	ProperStrand	45	1	-9.5652
chr4	14830342	14830389	protein_coding	Tmem55a	intron	ENSMUSG00000028221	ProperStrand	28	chr15	57978222	57978299	snoRNA	ENSMUSG00000080461_SNORA11	.	ENSMUSG00000080461	ProperStrand	171	4	-19.9682
chr3	89009743	89009759	protein_coding	Gba	exon	ENSMUSG00000028048	NonProperStrand	88	chr16	23110454	23110508	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.8342
chr5	108553759	108555021	protein_coding	Tmed5	exon	ENSMUSG00000063406	ProperStrand	9	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-14.8220
chr1	75308424	75308455	protein_coding	Dnpep	exon	ENSMUSG00000026209	ProperStrand	18	chr16	23111764	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-10.0073
chr6	83111538	83111571	protein_coding	1700003E16Rik	intron	ENSMUSG00000030030	NonProperStrand	2	chr2	31924012	31924028	protein_coding	Fam78a	utr3	ENSMUSG00000050592	NonProperStrand	340	1	-17.3932
chr2	121176333	121176349	protein_coding	Ppip5k1	exon	ENSMUSG00000033526	ProperStrand	85	chr19	8963129	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.7161
chr6	124613237	124613300	protein_coding	Lpcat3	exon	ENSMUSG00000004270	ProperStrand	19	chr9	120037985	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-6.9787
chrX	132673816	132673833	protein_coding	Bex4	intron	ENSMUSG00000047844	NonProperStrand	70	chr8	87525221	87525238	protein_coding	Hook2	exon	ENSMUSG00000052566	ProperStrand	204	1	-10.5490
chr2	151545281	151545328	protein_coding	Psmf1	exon	ENSMUSG00000032869	ProperStrand	11	chr16	23110988	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-4.7202
chr13	6586343	6587819	protein_coding	Pfkp	exon	ENSMUSG00000021196	ProperStrand	197	chr16	57391761	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	2	-8.9091
chr18	67712275	67712356	protein_coding	Spire1	exon	ENSMUSG00000024533	ProperStrand	14	chr1	63592162	63593014	protein_coding	Adam23	exon	ENSMUSG00000025964	ProperStrand	59	1	-16.3036
chr4	8679760	8679836	protein_coding	Chd7	exon	ENSMUSG00000041235	ProperStrand	80	chr9	120039540	120039630	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.8036
chr2	89368462	89368480	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	chr11	68886928	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	3	-4.5771
chr8	13416897	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	1	-2.8375
chr17	46814084	46814100	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr8	24367265	24367494	protein_coding	Golga7	utr5	ENSMUSG00000015341	ProperStrand	36	1	-10.2598
chr8	96696761	96697077	protein_coding	Mt2	exon	ENSMUSG00000031762	ProperStrand	71	chr7	118219574	118219635	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-3.8538
chr11	3649570	3649587	protein_coding	Osbp2	intron	ENSMUSG00000020435	ProperStrand	60	chr3	123210854	123210983	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-3.7286
chr16	33264358	33264403	protein_coding	Snx4	exon	ENSMUSG00000022808	ProperStrand	25	chr16	23110914	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-4.0159
chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	chr14	31827485	31827518	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-1.7830
chr11	115935746	115937022	protein_coding	Unc13d	exon	ENSMUSG00000057948	ProperStrand	89	chr5	121655052	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.0278
chr2	69587836	69587915	protein_coding	Ppig	exon	ENSMUSG00000042133	ProperStrand	13	chr16	23111376	23111484	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-9.7249
chr4	124405341	124405402	protein_coding	Sf3a3	exon	ENSMUSG00000028902	ProperStrand	11	chr10	23505177	23505267	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.1476
chr13	74494656	74494673	protein_coding	Ccdc127	utr3	ENSMUSG00000021578	NonProperStrand	54	chr9	15118247	15118378	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	4	-12.1455
chr17	6959042	6959132	protein_coding	Ezr	exon	ENSMUSG00000052397	ProperStrand	126	chr7	52382237	52382314	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-6.8074
chr9	66247161	66247247	protein_coding	Herc1	exon	ENSMUSG00000038664	ProperStrand	81	chr7	117166723	117166813	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-4.2423
chr5	144275642	144278087	protein_coding	Rac1	exon	ENSMUSG00000001847	ProperStrand	32	chr16	23110965	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-4.6769
chr11	52190163	52197361	protein_coding	Vdac1	exon	ENSMUSG00000020402	ProperStrand	107	chr11	97642951	97643051	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.5458
chr1	173714665	173714682	protein_coding	Slamf1	intron	ENSMUSG00000015316	NonProperStrand	3	chr2	31924012	31924028	protein_coding	Fam78a	utr3	ENSMUSG00000050592	NonProperStrand	340	1	-16.2363
chr19	45409733	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr7	51505525	51505591	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	1	-4.2749
chr11	115712153	115712198	protein_coding	Llgl2	exon	ENSMUSG00000020782	ProperStrand	62	chr8	125626945	125627005	snoRNA	ENSMUSG00000064450_Snord68	.	ENSMUSG00000064450	ProperStrand	181	1	-11.0324
chr8	110104531	110104574	protein_coding	Psmd7	utr3	ENSMUSG00000039067	ProperStrand	36	chr15	79908960	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	2	-10.5015
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr9	61907926	61907972	protein_coding	Glce	exon	ENSMUSG00000032252	ProperStrand	15	1	-8.6903
chr9	107644779	107644808	protein_coding	Rbm5	exon	ENSMUSG00000032580	ProperStrand	19	chr19	8963137	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-7.3481
chr9	30978158	30979558	protein_coding	Aplp2	exon	ENSMUSG00000031996	ProperStrand	172	chr11	62416607	62416657	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-3.1855
chr5	23825941	23825957	protein_coding	Kcnh2	exon	ENSMUSG00000038319	ProperStrand	242	chr11	62416604	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-2.5850
chr4	154010843	154010860	protein_coding	Prdm16	utr5	ENSMUSG00000039410	ProperStrand	44	chr19	59373456	59373514	protein_coding	Pdzd8	utr3	ENSMUSG00000074746	ProperStrand	42	1	-14.6606
chr10	79879959	79880062	protein_coding	Tcf3	exon	ENSMUSG00000020167	NonProperStrand	24	chr1	194571781	194571831	snRNA	ENSMUSG00000064881_U5	.	ENSMUSG00000064881	ProperStrand	187	2	-20.2914
chr2	91405840	91405942	protein_coding	Ckap5	exon	ENSMUSG00000040549	ProperStrand	53	chr8	73419712	73419771	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	6	-17.7658
chr10	128348851	128348870	protein_coding	Cd63	exon	ENSMUSG00000025351	ProperStrand	29	chr7	116664848	116664926	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.8662
chr6	118346243	118346799	protein_coding	Bms1	exon	ENSMUSG00000030138	ProperStrand	107	chr2	130102055	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	7	-20.6181
chr3	52149242	52149323	protein_coding	Foxo1	exon	ENSMUSG00000044167	ProperStrand	3	chr4	132394325	132394362	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	1	-15.5450
chr13	97945681	97949162	protein_coding	Gfm2	utr3	ENSMUSG00000021666	ProperStrand	26	chr4	131908688	131908808	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-4.4968
chr5	31510405	31510769	protein_coding	Ppm1g	exon	ENSMUSG00000029147	ProperStrand	69	chr7	148634769	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-3.7247
chr6	110214928	110214949	LINE	Lx9	L1	chr6Lx9110214913	ProperStrand	5	chr11	106111267	106111349	protein_coding	Ftsj3	exon	ENSMUSG00000020706	ProperStrand	64	3	-19.1986
chr17	33960232	33961245	protein_coding	Rps28	exon	ENSMUSG00000067288	ProperStrand	52	chr11	69481333	69481374	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-5.9055
chr11	120241778	120294422	protein_coding	Nploc4	utr3	ENSMUSG00000039703	ProperStrand	44	chr5	108336363	108336495	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-8.9902
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr17	27559700	27559717	protein_coding	Grm4	utr3	ENSMUSG00000063239	ProperStrand	147	1	-7.0054
chr18	12360689	12360779	protein_coding	Npc1	exon	ENSMUSG00000024413	ProperStrand	14	chr16	23111416	23111496	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.7143
chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	chr9	114540464	114540485	protein_coding	Cnot10	intron	ENSMUSG00000056167	NonProperStrand	3	1	-15.4532
chr18	78205118	78205137	protein_coding	5430411K18Rik	intron	ENSMUSG00000039840	NonProperStrand	6	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-9.9053
chr15	12802893	12802993	protein_coding	Drosha	intron	ENSMUSG00000022191	ProperStrand	163	chr14	33005038	33005057	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-2.2134
chr7	4762213	4763067	protein_coding	Ube2s	exon	ENSMUSG00000060860	ProperStrand	62	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.3718
chr4	43505767	43505847	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr16	36915371	36915461	protein_coding	Golgb1	exon	ENSMUSG00000034243	ProperStrand	92	1	-2.3272
mmu-miR-6240	1	23	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr6	82999207	82999223	protein_coding	Loxl3	exon	ENSMUSG00000000693	ProperStrand	14	1	-8.8326
chr2	90700673	90703769	protein_coding	Mtch2	intron	ENSMUSG00000027282	ProperStrand	12	chr16	23110963	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-4.4633
chr8	89365316	89365392	protein_coding	N4bp1	utr3	ENSMUSG00000031652	ProperStrand	98	chr3	96303425	96303471	tRNA	tRNA748-LysCTT	.	399968	ProperStrand	15	1	-15.1384
chr5	77307470	77330273	protein_coding	Aasdh	exon	ENSMUSG00000055923	ProperStrand	6	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-6.6757
chr2	91007806	91007982	protein_coding	Madd	exon	ENSMUSG00000040687	ProperStrand	5	chr4	122968647	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-11.4183
chr2	32781399	32781416	protein_coding	Lrsam1	utr3	ENSMUSG00000026792	ProperStrand	80	chr2	26494708	26494802	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	8	-19.8073
chr17	46716639	46723199	protein_coding	Ptk7	exon	ENSMUSG00000023972	ProperStrand	101	chr16	23111451	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	13	-19.2611
chr5	93603363	93603463	protein_coding	Sept11	utr3	ENSMUSG00000058013	ProperStrand	79	chr11	106362346	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-5.3047
chr5	43662201	43662301	protein_coding	Cpeb2	intron	ENSMUSG00000039782	ProperStrand	11	chr19	8799610	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	6	-inf
chr13	22098354	22098371	protein_coding	Prss16	intron	ENSMUSG00000006179	ProperStrand	78	chr5	108336363	108336411	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-4.3779
chr11	15212155	15212171	LINE	Lx	L1	chr11Lx15211662	ProperStrand	54	chr10	23505261	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.3802
chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	chr2	158182156	158182189	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-4.2901
chr19	5796201	5796228	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr11	67498188	67498205	protein_coding	Glp2r	intron	ENSMUSG00000049928	ProperStrand	5	1	-12.7004
chr11	77571693	77571709	SINE	B4A	B4	chr11B4A77571664	ProperStrand	6	chr1	183851397	183851415	protein_coding	Enah	intron	ENSMUSG00000022995	ProperStrand	196	1	-15.7045
chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	chr7	118219574	118219740	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	6	-2.1895
chr17	28023770	28023786	protein_coding	Uhrf1bp1	exon	ENSMUSG00000039512	ProperStrand	79	chr8	73419682	73419774	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-4.6309
chr8	72767146	72767236	protein_coding	Sugp2	exon	ENSMUSG00000036054	ProperStrand	33	chr9	64024488	64024568	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	1	-9.5685
chr7	116663705	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	chr8	87574106	87574175	snoRNA	ENSMUSG00000077527_SNORD41	.	ENSMUSG00000077527	ProperStrand	29	2	-6.4868
chr13	10075949	10075973	Low_complexity	GA-rich	Low_complexity	chr13GA-rich10075900	NonProperStrand	6	chr8	73419803	73419844	protein_coding	Rpl18a	intron	ENSMUSG00000045128	ProperStrand	394	1	-14.2965
chr11	75546553	75565384	protein_coding	Ywhae	exon	ENSMUSG00000020849	ProperStrand	176	chr16	37384897	37384913	protein_coding	Stxbp5l	utr5	ENSMUSG00000022829	ProperStrand	332	1	-7.7351
chr8	129458787	129458827	protein_coding	Tomm20	utr3	ENSMUSG00000058779	ProperStrand	55	chr3	31102300	31102318	protein_coding	Slc7a14	utr3	ENSMUSG00000069072	ProperStrand	20	1	-15.6859
chr12	60270178	60270206	protein_coding	Ctage5	intron	ENSMUSG00000021000	ProperStrand	35	chr4	131866155	131866283	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	3	-11.2086
chr11	53185806	53185886	protein_coding	Aff4	exon	ENSMUSG00000049470	ProperStrand	94	chr8	73419657	73419747	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	10	-21.4663
chr11	119136228	119136244	protein_coding	Gaa	exon	ENSMUSG00000025579	NonProperStrand	201	chr9	50816824	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	1	-9.3845
chr11	72261301	72261338	protein_coding	Mybbp1a	exon	ENSMUSG00000040463	ProperStrand	279	chr19	8798746	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-2.0323
chr2	121176333	121176349	protein_coding	Ppip5k1	exon	ENSMUSG00000033526	ProperStrand	85	chr7	26022466	26022524	protein_coding	Gsk3a	exon	ENSMUSG00000057177	ProperStrand	14	1	-15.5776
chr11	45700007	45700909	protein_coding	Clint1	exon	ENSMUSG00000006169	ProperStrand	19	chr16	23110988	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7016
chr5	114580531	114580559	protein_coding	Ung	exon	ENSMUSG00000029591	ProperStrand	20	chr4	131866152	131866242	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-9.4930
chr17	39985128	39985689	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr17	35299536	35299642	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	5	-0.7274
chr17	35822057	35822257	protein_coding	Ddr1	exon	ENSMUSG00000003534	ProperStrand	129	chr10	39978275	39978365	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-3.9922
chr13	101541068	101541087	protein_coding	Cenph	intron	ENSMUSG00000045273	NonProperStrand	45	chr4	110630646	110630663	protein_coding	Agbl4	intron	ENSMUSG00000061298	NonProperStrand	33	1	-15.0882
chr5	144018877	144018967	protein_coding	Zfp316	intron	ENSMUSG00000046658	ProperStrand	7	chr5	108334247	108336494	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-9.2393
chr17	56444590	56444615	protein_coding	Uhrf1	exon	ENSMUSG00000001228	ProperStrand	229	chr15	98350206	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-2.3212
chr4	134733397	134733415	protein_coding	Runx3	utr3	ENSMUSG00000070691	ProperStrand	17	chr19	8963026	8963166	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-7.6887
chr5	145903356	145903427	protein_coding	Bud31	exon	ENSMUSG00000038722	ProperStrand	12	chr4	131908252	131908342	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-10.5208
chr19	32464273	32464289	lincRNA	2700046G09Rik	exon	ENSMUSG00000024893	ProperStrand	59	chr2	89368462	89368478	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	1	-10.3922
chr4	131447226	131447242	protein_coding	Srsf4	exon	ENSMUSG00000028911	ProperStrand	101	chr11	97642952	97643052	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.6318
chr6	5092733	5092772	protein_coding	Ppp1r9a	intron	ENSMUSG00000032827	ProperStrand	50	chr17	35089181	35089218	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-5.8427
chr3	154274474	154274506	protein_coding	Cryz	exon	ENSMUSG00000028199	ProperStrand	5	chr2	181316563	181316579	protein_coding	Uckl1	exon	ENSMUSG00000089917	ProperStrand	142	1	-16.7157
chr18	42690312	42690344	protein_coding	Tcerg1	exon	ENSMUSG00000024498	ProperStrand	210	chr4	130305548	130305619	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	6	-19.3935
chr19	12066468	12066484	protein_coding	Osbp	exon	ENSMUSG00000024687	ProperStrand	19	chr17	39985470	39985499	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-8.2351
chr17	45707395	45707495	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr4	128867196	128867212	protein_coding	Yars	exon	ENSMUSG00000028811	ProperStrand	131	1	-5.1984
chr9	120037897	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	chr11	77995188	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	5	-0.9183
chr5	71534308	71534398	LINE	Lx4A	L1	chr5Lx4A71534254	NonProperStrand	1	chr5	71534028	71534108	LINE	Lx9	L1	chr5Lx971533896	ProperStrand	1	1	-inf
chr15	72376666	72376682	protein_coding	Kcnk9	exon	ENSMUSG00000036760	NonProperStrand	42	chr5	108336376	108336406	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-5.5759
chr17	35071985	35072052	protein_coding	Neu1	utr3	ENSMUSG00000007038	ProperStrand	3	chr11	100566475	100566562	protein_coding	Kat2a	utr3	ENSMUSG00000020918	ProperStrand	68	3	-inf
chr11	23474981	23475021	protein_coding	0610010F05Rik	utr3	ENSMUSG00000042208	ProperStrand	6	chr4	131865853	131865953	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-6.1051
chr6	87037355	87037434	protein_coding	Gfpt1	exon	ENSMUSG00000029992	ProperStrand	22	chr16	23109070	23109090	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-9.3022
chrX	17740226	17740244	protein_coding	Kdm6a	exon	ENSMUSG00000037369	ProperStrand	19	chr9	15119631	15119693	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.7702
chr1	58651578	58651635	protein_coding	Ndufb3	intron	ENSMUSG00000026032	ProperStrand	14	chr1	145626121	145626199	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-11.7882
chr17	75690723	75690739	protein_coding	Ltbp1	exon	ENSMUSG00000001870	ProperStrand	136	chr4	21606097	21606114	protein_coding	Prdm13	exon	ENSMUSG00000040478	ProperStrand	51	1	-11.9981
chr19	38869531	38869547	protein_coding	Noc3l	exon	ENSMUSG00000024999	NonProperStrand	149	chr11	69481362	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-1.6721
chr19	32320703	32320721	protein_coding	Sgms1	intron	ENSMUSG00000040451	NonProperStrand	7	chr2	130102053	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-9.7314
chr3	34549758	34549838	protein_coding	Sox2	exon	ENSMUSG00000074637	ProperStrand	299	chr17	39985206	39985295	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-2.9025
chr19	7033621	7034303	protein_coding	Plcb3	exon	ENSMUSG00000024960	ProperStrand	111	chr5	121655102	121655155	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.6397
chr2	157832850	157832940	protein_coding	Tti1	exon	ENSMUSG00000027650	ProperStrand	17	chr4	131908361	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.5556
chr1	63104886	63104986	protein_coding	Ino80d	exon	ENSMUSG00000040865	ProperStrand	70	chr18	33954912	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-3.2240
chr2	178194847	178194864	protein_coding	Cdh26	exon	ENSMUSG00000039155	NonProperStrand	77	chr15	79908929	79909019	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	3	-11.7556
chr11	97889772	97890715	protein_coding	Rpl19	exon	ENSMUSG00000017404	ProperStrand	120	chr15	75692859	75692876	protein_coding	Gsdmd	utr5	ENSMUSG00000022575	NonProperStrand	5	1	-17.0742
chr16	64445413	64445503	LINE	L1MA9	L1	chr16L1MA964444576	NonProperStrand	1	chr16	15587777	15587857	protein_coding	Ube2v2	intron	ENSMUSG00000022674	ProperStrand	10	1	-inf
chr17	78892351	78892431	protein_coding	Gm10093	utr3	ENSMUSG00000061062	ProperStrand	2	chr11	6428070	6428160	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-10.4671
chr4	140669433	140669503	protein_coding	D4Ertd22e	utr3	ENSMUSG00000040842	ProperStrand	23	chr8	46055165	46055182	protein_coding	Fat1	intron	ENSMUSG00000070047	ProperStrand	306	3	-19.2659
chr7	146684406	146684425	protein_coding	Inpp5a	intron	ENSMUSG00000025477	ProperStrand	166	chr3	153575112	153575168	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	1	-6.4733
chr13	105938146	105938163	protein_coding	Rnf180	intron	ENSMUSG00000021720	ProperStrand	5	chr12	54111596	54126710	protein_coding	Akap6	exon	ENSMUSG00000061603	ProperStrand	9	1	-18.9379
chr19	6248245	6248262	protein_coding	Atg2a	exon	ENSMUSG00000024773	NonProperStrand	9	chr1	9932549	9932605	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-11.6074
chr7	116665119	116665154	protein_coding	Rpl27a	exon	ENSMUSG00000046364	ProperStrand	149	chr9	120039560	120039682	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.7720
chr14	31111299	31111317	protein_coding	Cacna1d	intron	ENSMUSG00000015968	NonProperStrand	12	chr7	104654624	104656261	protein_coding	Ints4	exon	ENSMUSG00000025133	ProperStrand	19	1	-19.1258
chr4	116827260	116828189	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	chr10	23505152	23505233	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	8	-3.0385
chr3	100876906	100877006	protein_coding	Ptgfrn	exon	ENSMUSG00000027864	ProperStrand	67	chr9	15119733	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.4401
chr5	33945185	33945265	protein_coding	Fam53a	utr3	ENSMUSG00000037339	ProperStrand	18	chr16	23110962	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7867
chr14	80262508	80262525	lincRNA	Gm6999	intron	ENSMUSG00000075495	ProperStrand	265	chr9	15119287	15119398	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-2.3802
chr6	82594910	82594988	protein_coding	Pole4	intron	ENSMUSG00000030042	ProperStrand	11	chr1	145626075	145626165	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-12.2904
chr9	64981509	64981528	protein_coding	Igdcc4	exon	ENSMUSG00000032816	NonProperStrand	36	chr4	131908689	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-3.6190
chr6	107738191	107738208	Other	RMER1B	Other	chr6RMER1B107738112	ProperStrand	29	chr11	69482161	69482212	protein_coding	Eif4a1	exon	ENSMUSG00000059796	ProperStrand	108	1	-13.6028
chr15	84011355	84011371	protein_coding	Pnpla3	exon	ENSMUSG00000041653	ProperStrand	3	chr11	62416582	62416646	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-11.4760
chr10	20080842	20080860	protein_coding	Fam54a	utr3	ENSMUSG00000019992	ProperStrand	232	chr9	64023228	64023289	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	1	-5.7679
chr8	124907503	124907583	protein_coding	Zc3h18	exon	ENSMUSG00000017478	ProperStrand	55	chr7	140186999	140190530	protein_coding	Ctbp2	exon	ENSMUSG00000030970	ProperStrand	89	1	-12.6973
chr4	40938909	40940800	protein_coding	Nfx1	exon	ENSMUSG00000028423	NonProperStrand	3	chr5	103854542	103891155	protein_coding	Ptpn13	utr5	ENSMUSG00000034573	NonProperStrand	74	1	-20.5127
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr6	144365069	144365085	protein_coding	Sox5	intron	ENSMUSG00000041540	ProperStrand	34	1	-8.9357
chr17	71200266	71200320	protein_coding	Tgif1	utr5	ENSMUSG00000047407	ProperStrand	64	chr11	97642963	97643008	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	4	-8.6596
chr7	34940945	34940961	protein_coding	Uba2	exon	ENSMUSG00000052997	ProperStrand	165	chr9	120037898	120038029	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-2.8339
chr1	74878435	74878525	LINE	L1MC	L1	chr1L1MC74878338	ProperStrand	1	chr1	74878098	74878188	SINE	B3A	B2	chr1B3A74878030	NonProperStrand	1	1	-inf
chr13	42265104	42265148	protein_coding	Hivep1	intron	ENSMUSG00000021366	ProperStrand	24	chr15	34370545	34370589	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-5.3037
chr11	78860823	78860922	protein_coding	Ksr1	exon	ENSMUSG00000018334	ProperStrand	12	chr10	23505152	23505186	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-10.0058
chr18	14806279	14806369	snRNA	ENSMUSG00000065369_U1	.	ENSMUSG00000065369	ProperStrand	5	chr18	33954817	33954897	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-8.5187
chr13	23654045	23654125	protein_coding	Hist1h3e	exon	ENSMUSG00000069273	ProperStrand	30	chr19	8798522	8798553	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-6.5788
chr6	125058334	125073381	protein_coding	Chd4	exon	ENSMUSG00000063870	ProperStrand	303	chr11	68887036	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	2	-2.6100
chr3	123120446	123120463	SINE	RSINE1	B4	chr3RSINE1123120387	NonProperStrand	6	chr11	106362638	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-12.1528
chr12	106206251	106206297	protein_coding	4831426I19Rik	exon	ENSMUSG00000054150	ProperStrand	5	chr7	148634763	148634836	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-14.7019
chr4	131865855	131865883	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr10	127895517	127895568	tRNA	tRNA688-SerCGA	.	177979	ProperStrand	71	1	-1.5136
chr19	16044806	16044824	protein_coding	Cep78	intron	ENSMUSG00000041491	NonProperStrand	1	chr17	24342577	24342596	protein_coding	Ntn3	utr3	ENSMUSG00000079662	ProperStrand	237	1	-inf
chr9	78023113	78023147	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr10	74724663	74726058	protein_coding	Specc1l	exon	ENSMUSG00000033444	ProperStrand	36	1	-6.8903
chr7	134592423	134592441	processed_transcript	B130055M24Rik	.	ENSMUSG00000086502	ProperStrand	3	chr15	98350145	98350230	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-11.0538
chr8	80810205	80810222	protein_coding	Ttc29	intron	ENSMUSG00000037101	ProperStrand	22	chr5	121655101	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.6854
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr2	37996803	37996819	protein_coding	Dennd1a	intron	ENSMUSG00000035392	NonProperStrand	128	1	-7.2053
chr14	66434136	66435459	protein_coding	Pbk	exon	ENSMUSG00000022033	ProperStrand	4	chr5	147646770	147646851	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	4	-inf
chr9	20823530	20823620	protein_coding	Icam1	exon	ENSMUSG00000037405	ProperStrand	44	chr10	23505200	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.6830
chr4	131826011	131826126	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	chr9	15119638	15119767	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	4	-1.3608
chr2	135788792	135788809	protein_coding	Plcb4	intron	ENSMUSG00000039943	ProperStrand	50	chr17	39985356	39985428	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-6.2919
chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	chr10	39978369	39978484	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	11	-6.8249
chr15	34371066	34371090	protein_coding	Rpl30	exon	ENSMUSG00000058600	ProperStrand	65	chr14	33005094	33005138	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	3	-9.4228
chr2	73200537	73200553	protein_coding	Gpr155	exon	ENSMUSG00000041762	ProperStrand	33	chr7	135027019	135027048	protein_coding	Zfp646	exon	ENSMUSG00000049739	ProperStrand	29	1	-15.9837
chr7	19590197	19590213	protein_coding	Irf2bp1	exon	ENSMUSG00000044030	NonProperStrand	81	chr7	117189955	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-4.8657
chr8	86521336	86521392	Low_complexity	CT-rich	Low_complexity	chr8CT-rich86521313	ProperStrand	1	chr13	24567656	24567701	protein_coding	Cmah	utr3	ENSMUSG00000016756	NonProperStrand	53	1	-inf
chr5	116093643	116093696	protein_coding	Rab35	exon	ENSMUSG00000029518	ProperStrand	17	chr4	131865885	131865975	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-6.7782
chr5	115574207	115574294	protein_coding	Unc119b	utr3	ENSMUSG00000046562	ProperStrand	20	chr3	123210889	123210979	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-4.0323
chr19	57532298	57532315	protein_coding	Trub1	intron	ENSMUSG00000025086	ProperStrand	19	chr2	26493400	26493450	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-5.9729
chr7	16524110	16524197	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	chr10	110918634	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-0.6963
chr9	86513420	86513436	protein_coding	Me1	exon	ENSMUSG00000032418	NonProperStrand	5	chr4	131865855	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-10.8861
chr6	113546616	113546651	protein_coding	Fancd2	utr3	ENSMUSG00000034023	ProperStrand	65	chr19	8798750	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-4.6471
chr8	114060165	114060201	protein_coding	Znrf1	utr5	ENSMUSG00000033545	ProperStrand	13	chr17	35088983	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-8.9493
chr5	52552152	52552192	protein_coding	Dhx15	exon	ENSMUSG00000029169	ProperStrand	53	chr16	38158132	38158226	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	12	-19.9374
chr19	8799021	8799096	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	chr7	29136525	29136654	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	24	-1.2330
chr4	34758910	34758960	protein_coding	Zfp292	exon	ENSMUSG00000039967	ProperStrand	45	chr1	162966830	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	3	-15.5207
chr7	108440949	108440967	protein_coding	Atg16l2	intron	ENSMUSG00000047767	ProperStrand	121	chr5	121655054	121655154	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.4917
chr14	34907593	34907918	protein_coding	Anxa8	exon	ENSMUSG00000021950	ProperStrand	26	chrX	84483699	84483715	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-9.9352
chr13	12667155	12701260	protein_coding	Ero1lb	exon	ENSMUSG00000057069	ProperStrand	15	chr3	123210876	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	5	-19.3071
chr5	23506505	23506595	protein_coding	Fam126a	intron	ENSMUSG00000028995	ProperStrand	6	chr10	23505200	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-5.3874
chr11	102267065	102267095	protein_coding	Slc25a39	exon	ENSMUSG00000018677	ProperStrand	35	chr8	124475493	124475509	protein_coding	Banp	intron	ENSMUSG00000025316	NonProperStrand	34	1	-15.5401
chr15	12802427	12802527	protein_coding	Drosha	intron	ENSMUSG00000022191	ProperStrand	163	chr3	94894546	94894611	snoRNA	ENSMUSG00000064952_SNORD62	.	ENSMUSG00000064952	ProperStrand	75	1	-10.8590
chr11	62416575	62416597	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	2	-3.4510
chr15	38944559	38950308	protein_coding	Dcaf13	exon	ENSMUSG00000022300	ProperStrand	8	chr7	150717345	150717425	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-9.5994
chr1	162968211	162968291	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	chr2	91436246	91436336	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	8	-14.7780
chr5	140284133	140284166	protein_coding	Tmem184a	intron	ENSMUSG00000036687	ProperStrand	7	chr10	23505149	23505236	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-17.1327
chr15	98350150	98350253	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	chr6	125136466	125136701	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	8	-3.4203
chr11	6425701	6425788	lincRNA	Gm11974	exon	ENSMUSG00000085156	ProperStrand	34	chr17	13112510	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	3	-13.2354
chr11	32635307	32635325	protein_coding	Fbxw11	exon	ENSMUSG00000020271	NonProperStrand	31	chr7	117166744	117166842	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	4	-18.0437
chr11	69779358	69779422	protein_coding	Cldn7	utr5	ENSMUSG00000018569	ProperStrand	7	chr9	83678800	83681880	protein_coding	Elovl4	exon	ENSMUSG00000032262	ProperStrand	159	1	-15.7771
chr2	127408074	127408109	protein_coding	Zfp661	intron	ENSMUSG00000034800	ProperStrand	15	chr5	121655016	121655098	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	4	-20.2872
chr4	118955020	118955447	protein_coding	Ybx1	exon	ENSMUSG00000028639	ProperStrand	171	chr11	68886928	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	8	-18.6360
chr11	119996190	119999216	protein_coding	Slc38a10	exon	ENSMUSG00000061306	ProperStrand	91	chr10	80641693	80641744	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	5	-19.2654
mmu-miR-690	2	22	miRNA	mmu-miR-690	.	mmu-miR-690	ProperStrand	63	chr10	90581034	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	9	-inf
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr12	110888851	110888905	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	1	-4.1673
chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	chr11	116533844	116533893	snoRNA	ENSMUSG00000065640_Snord1c	.	ENSMUSG00000065640	ProperStrand	373	2	-4.3012
chr10	20080842	20080858	protein_coding	Fam54a	utr3	ENSMUSG00000019992	ProperStrand	232	chr10	90581031	90581131	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-2.3402
chr8	87366472	87366562	protein_coding	Calr	utr3	ENSMUSG00000003814	ProperStrand	232	chr18	35714145	35714225	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-1.2279
chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	chr8	108380054	108380114	protein_coding	Thap11	exon	ENSMUSG00000036442	ProperStrand	34	1	-11.2210
chr5	102311567	102311619	protein_coding	Wdfy3	utr3	ENSMUSG00000043940	ProperStrand	45	chr4	131908817	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-4.7431
chr2	148969367	148969384	LINE	Lx3_Mus	L1	chr2Lx3_Mus148968627	ProperStrand	8	chr11	6255965	6256065	protein_coding	Ogdh	utr3	ENSMUSG00000020456	ProperStrand	42	1	-17.8767
chr10	60692417	60692433	protein_coding	Adamts14	exon	ENSMUSG00000059901	NonProperStrand	127	chr14	31827477	31827515	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-5.4693
chr8	26879777	26879793	protein_coding	Gm17484	utr3	ENSMUSG00000091514	ProperStrand	68	chr18	73693169	73693186	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-5.2799
chr6	47731678	47731711	misc_RNA	Y_RNA	.	ENSMUSG00000064945	ProperStrand	93	chr14	31953025	31953118	protein_coding	Stab1	exon	ENSMUSG00000042286	NonProperStrand	127	1	-10.9270
chr10	79584324	79584414	protein_coding	Stk11	intron	ENSMUSG00000003068	ProperStrand	24	chr8	73419707	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.8583
chr13	98265161	98265275	lincRNA	Gm11019	exon	ENSMUSG00000078952	ProperStrand	113	chr2	26768411	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	3	-10.4989
chr15	76427750	76427923	protein_coding	Cpsf1	exon	ENSMUSG00000034022	ProperStrand	127	chr9	120037959	120038049	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-3.3010
chr11	6319200	6319512	protein_coding	Ppia	exon	ENSMUSG00000071866	ProperStrand	127	chr3	123210854	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-1.9441
chr2	157119950	157120991	protein_coding	Rpn2	exon	ENSMUSG00000027642	ProperStrand	363	chr2	119752208	119752271	protein_coding	Mga	exon	ENSMUSG00000033943	ProperStrand	180	1	-7.5136
chr4	43505656	43505681	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr4	128891258	128891315	protein_coding	Yars	exon	ENSMUSG00000028811	ProperStrand	131	2	-3.2246
chr11	50109045	50112681	protein_coding	Canx	utr3	ENSMUSG00000020368	ProperStrand	296	chr11	106362656	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	2	-7.1521
chr10	62084199	62087523	protein_coding	Ddx50	exon	ENSMUSG00000020076	ProperStrand	3	chr9	95363284	95364783	protein_coding	2610101N10Rik	exon	ENSMUSG00000032407	NonProperStrand	3	1	-inf
chr5	42136454	42136473	Low_complexity	GA-rich	Low_complexity	chr5GA-rich42136449	NonProperStrand	106	chr3	35965150	35965166	protein_coding	Acad9	exon	ENSMUSG00000027710	NonProperStrand	5	1	-17.2816
chr11	9485486	9488433	protein_coding	Abca13	exon	ENSMUSG00000004668	ProperStrand	7	chr4	131908356	131908393	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-5.3201
chr16	91659928	91660042	protein_coding	Son	exon	ENSMUSG00000022961	ProperStrand	59	chr18	35716854	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.1973
chr11	79887158	79887175	protein_coding	Crlf3	intron	ENSMUSG00000017561	ProperStrand	47	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.7261
chr2	164226383	164226400	protein_coding	Matn4	exon	ENSMUSG00000016995	ProperStrand	15	chr8	129468746	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-7.1564
chr5	77285557	77285647	protein_coding	C530008M17Rik	exon	ENSMUSG00000036377	ProperStrand	9	chr5	115940327	115940407	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	1	-12.6194
chr10	94013759	94013776	protein_coding	Tmcc3	exon	ENSMUSG00000020023	ProperStrand	23	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.4190
chrX	42140039	42140055	protein_coding	Dcaf12l1	utr3	ENSMUSG00000045284	ProperStrand	7	chr11	6428108	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-7.4403
chr6	92104375	92104391	protein_coding	Nr2c2	exon	ENSMUSG00000005893	ProperStrand	101	chr10	90432659	90432678	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	1	-9.5737
chr4	55431651	55431667	lincRNA	Gm12505	exon	ENSMUSG00000087070	ProperStrand	447	chr12	55835604	55835704	snRNA	ENSMUSG00000075960_U1	.	ENSMUSG00000075960	ProperStrand	210	1	-6.7973
chr9	106561501	106561591	protein_coding	Tex264	exon	ENSMUSG00000040813	ProperStrand	18	chr16	23111695	23111775	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.0433
chrX	103382604	103398961	protein_coding	Pgk1	utr3	ENSMUSG00000062070	ProperStrand	484	chr1	89681148	89681396	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	6	-10.9700
chr4	95667946	95669141	protein_coding	Hook1	exon	ENSMUSG00000028572	ProperStrand	49	chr7	29136613	29136638	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.7131
chr11	105118231	105121594	protein_coding	Tlk2	exon	ENSMUSG00000020694	ProperStrand	19	chr15	98350193	98350283	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-7.0352
chr2	32072793	32074231	protein_coding	Prrc2b	exon	ENSMUSG00000039262	ProperStrand	344	chr19	48280865	48280881	protein_coding	Sorcs3	exon	ENSMUSG00000063434	ProperStrand	16	1	-12.5005
chr11	42440243	42440259	protein_coding	Gabrb2	exon	ENSMUSG00000007653	ProperStrand	248	chr11	57874941	57874957	protein_coding	Larp1	utr3	ENSMUSG00000037331	ProperStrand	201	1	-8.0503
chr17	24857219	24858045	protein_coding	Rps2	utr5	ENSMUSG00000044533	ProperStrand	373	chr17	24857717	24857843	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	9	-6.1119
chr17	53619475	53619491	protein_coding	Rab5a	intron	ENSMUSG00000017831	NonProperStrand	2	chr9	120038610	120038651	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-10.2959
chr4	109642151	109642170	SINE	MIR	MIR	chr4MIR109642111	NonProperStrand	2	chr4	122968584	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	2	-inf
chr11	113730275	113731050	protein_coding	Sdk2	exon	ENSMUSG00000041592	NonProperStrand	98	chr9	15118322	15118378	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-2.5917
chr3	31194573	31194590	lincRNA	Gm15496	intron	ENSMUSG00000085953	ProperStrand	1	chr2	22444730	22444794	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-inf
chr13	55416065	55416165	protein_coding	Nsd1	utr3	ENSMUSG00000021488	ProperStrand	186	chr1	162967523	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	7	-12.7874
chr14	66196692	66196710	protein_coding	Elp3	intron	ENSMUSG00000022031	NonProperStrand	12	chr12	106269444	106269494	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-7.3282
chr11	95821108	95821209	protein_coding	Igf2bp1	utr3	ENSMUSG00000013415	ProperStrand	140	chr11	62416994	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	16	-19.6853
chr7	135922071	135922111	protein_coding	Sec23ip	exon	ENSMUSG00000055319	ProperStrand	27	chr15	73416617	73416633	protein_coding	Slc45a4	exon	ENSMUSG00000079020	ProperStrand	127	1	-13.4261
chrX	98643170	98643191	protein_coding	Nono	utr3	ENSMUSG00000031311	ProperStrand	102	chr4	131908236	131908300	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-2.5636
chr11	6520326	6520406	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	chr6	124665431	124665521	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	1	-1.7667
chr1	136645404	136645420	protein_coding	Syt2	utr3	ENSMUSG00000026452	NonProperStrand	13	chr2	26493419	26493449	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-6.7422
chr6	117874102	117874150	protein_coding	Hnrnpf	exon	ENSMUSG00000042079	ProperStrand	147	chr8	113366284	113366345	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	5	-inf
chr5	65795461	65796588	protein_coding	Lias	exon	ENSMUSG00000029199	ProperStrand	9	chr16	23110914	23110946	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.9939
chr7	53326212	53326243	protein_coding	Nomo1	exon	ENSMUSG00000030835	ProperStrand	85	chr9	120038564	120038654	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.4311
chr6	113067510	113067567	protein_coding	Setd5	exon	ENSMUSG00000034269	ProperStrand	162	chr8	129468746	129468849	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	2	-4.5529
chr8	125822243	125822333	protein_coding	Fanca	intron	ENSMUSG00000032815	ProperStrand	32	chr2	26494724	26494804	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-7.1703
chr5	148113281	148113297	protein_coding	Cdx2	utr3	ENSMUSG00000029646	ProperStrand	276	chr8	88288233	88288265	protein_coding	Itfg1	exon	ENSMUSG00000031703	ProperStrand	38	1	-11.1758
chr17	46692344	46692409	protein_coding	Srf	exon	ENSMUSG00000015605	ProperStrand	11	chr11	102416321	102416338	protein_coding	Gpatch8	intron	ENSMUSG00000034621	NonProperStrand	17	1	-19.6539
chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	chr17	35989626	35989658	protein_coding	Mdc1	exon	ENSMUSG00000061607	ProperStrand	85	1	-7.8969
chr13	101555501	101555715	protein_coding	Ccnb1	exon	ENSMUSG00000041431	ProperStrand	39	chr1	162965536	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.0770
chr13	44964971	44965080	protein_coding	Jarid2	intron	ENSMUSG00000038518	ProperStrand	372	chr19	8963027	8963083	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-6.5230
chr18	24677556	24677603	protein_coding	Rprd1a	intron	ENSMUSG00000040446	ProperStrand	21	chr5	108336363	108336409	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-11.2513
chr19	27837820	27837836	protein_coding	Rfx3	utr3	ENSMUSG00000040929	ProperStrand	92	chr19	8963027	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-2.9683
chr12	5217756	5217773	protein_coding	Klhl29	intron	ENSMUSG00000020627	NonProperStrand	5	chr9	15119712	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-7.5411
chr3	37330554	37330586	protein_coding	Spata5	exon	ENSMUSG00000027722	ProperStrand	13	chr5	34246126	34246196	protein_coding	Whsc2	intron	ENSMUSG00000029111	ProperStrand	9	1	-19.9343
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr9	50816824	50816841	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	1	-6.4856
chr5	139662008	139662112	protein_coding	Heatr2	utr3	ENSMUSG00000025857	ProperStrand	7	chr9	90246836	90246866	snRNA	ENSMUSG00000065881_U1	.	ENSMUSG00000065881	ProperStrand	1	1	-inf
chr5	100970635	100972864	protein_coding	Cops4	exon	ENSMUSG00000035297	ProperStrand	8	chr10	23505188	23505278	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-8.1135
chr19	55401096	55401113	protein_coding	Vti1a	intron	ENSMUSG00000024983	NonProperStrand	62	chr1	162968442	162968460	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-6.0144
chr4	86565136	86565236	protein_coding	Acer2	utr3	ENSMUSG00000038007	ProperStrand	8	chr8	124103115	124103137	protein_coding	Gm20388	intron	ENSMUSG00000092329	NonProperStrand	203	1	-14.9934
chr6	52184657	52184673	protein_coding	Hoxa10	exon	ENSMUSG00000000938	NonProperStrand	2	chr4	131865854	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-inf
chr11	6520322	6520445	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	chr18	33954917	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	16	-12.4372
chr8	73419674	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	chr11	58115972	58116007	tRNA	tRNA1911-LeuCAA	.	102038	ProperStrand	165	3	-4.2888
chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	chr1	172993122	172993139	protein_coding	Fcgr3	intron	ENSMUSG00000059498	ProperStrand	44	1	-13.1936
chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	chr14	33974944	33974965	protein_coding	Wdfy4	intron	ENSMUSG00000051506	NonProperStrand	11	1	-13.2211
chrX	90895307	90895397	LINE	Lx7	L1	chrXLx790895022	NonProperStrand	1	chrX	90895453	90895543	LINE	Lx7	L1	chrXLx790895418	NonProperStrand	1	1	-inf
chr11	74718968	74719010	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	chr17	24856619	24856719	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-2.4141
chr13	10941778	10941795	LTR	MTEa	MaLR	chr13MTEa10941575	ProperStrand	1	chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	1	-inf
chr7	31895791	31899711	protein_coding	Hpn	utr5	ENSMUSG00000001249	ProperStrand	126	chr11	77995188	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-4.7381
chr1	93263065	93263081	protein_coding	Fam132b	exon	ENSMUSG00000047443	NonProperStrand	98	chr7	118219690	118219740	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-3.2606
chrX	20259301	20259559	protein_coding	Uba1	exon	ENSMUSG00000001924	ProperStrand	156	chr11	97642958	97643038	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.0279
chr8	28308992	28309740	protein_coding	Got1l1	exon	ENSMUSG00000039720	ProperStrand	5	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-6.0411
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr12	13230489	13230612	protein_coding	Ddx1	exon	ENSMUSG00000037149	ProperStrand	47	1	-9.3303
chr7	28928528	28928545	protein_coding-noncoding	9530053A07Rik	utr5	ENSMUSG00000078776	NonProperStrand	1	chr11	69481375	69481432	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-inf
chr1	136225761	136225778	protein_coding	Ppfia4	exon	ENSMUSG00000026458	ProperStrand	45	chr19	8963051	8963151	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.7687
chr11	74473900	74473990	protein_coding	1300001I01Rik	exon	ENSMUSG00000020741	ProperStrand	76	chr16	23110914	23110994	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-0.9666
chr1	54531595	54531645	protein_coding	Pgap1	utr3	ENSMUSG00000073678	ProperStrand	7	chr7	116664818	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	4	-inf
chr9	78327901	78328061	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr12	81618868	81618892	snoRNA	ENSMUSG00000093141_AC163282.1	.	ENSMUSG00000093141	ProperStrand	39	2	-11.5678
chr6	67221246	67221304	protein_coding	Serbp1	exon	ENSMUSG00000036371	ProperStrand	261	chr7	16534823	16534839	protein_coding	Ehd2	utr3	ENSMUSG00000074364	NonProperStrand	197	1	-7.9888
chr18	56868047	56868098	protein_coding	Lmnb1	exon	ENSMUSG00000024590	ProperStrand	176	chr18	35714217	35714262	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-1.6225
chr5	74489261	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr15	81743556	81743593	protein_coding	Aco2	exon	ENSMUSG00000022477	ProperStrand	237	1	-3.0322
chr9	78023131	78023193	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr11	76335908	76335924	protein_coding	Abr	intron	ENSMUSG00000017631	NonProperStrand	8	1	-9.9796
chr7	149170854	149171340	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-4.9653
chr6	31228222	31228238	lincRNA	2210408F21Rik	intron	ENSMUSG00000087380	NonProperStrand	4	chr19	8798483	8798525	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-10.8309
chr19	40194276	40194311	LINE	Lx2	L1	chr19Lx240189486	ProperStrand	24	chr19	8799835	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-6.7554
chr19	42021408	42021528	protein_coding	Mms19	exon	ENSMUSG00000025159	ProperStrand	52	chr5	115593918	115593956	protein_coding	Mlec	utr3	ENSMUSG00000048578	ProperStrand	47	1	-14.0988
chr7	4745754	4746043	protein_coding	Rpl28	exon	ENSMUSG00000030432	ProperStrand	220	chr10	85855414	85855431	protein_coding	Syn3	intron	ENSMUSG00000059602	NonProperStrand	40	2	-18.2181
chr1	134346251	134346315	protein_coding	Dstyk	exon	ENSMUSG00000042046	ProperStrand	11	chr4	131908254	131908344	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.3989
chr4	81938676	81938693	protein_coding	Nfib	utr3	ENSMUSG00000008575	ProperStrand	50	chr12	110874223	110874290	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	4	-20.6866
chr8	3523801	3523854	protein_coding	Pnpla6	exon	ENSMUSG00000004565	ProperStrand	60	chrX	77306658	77306675	pseudogene	Gm4773	.	ENSMUSG00000080847	NonProperStrand	11	1	-16.7349
chr19	44188397	44188487	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr17	13112447	13112528	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	6	-4.4717
chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	chr2	22444473	22445091	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	3	-7.3179
chr9	15119729	15119766	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	NonProperStrand	21	chr2	32818802	32818873	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	NonProperStrand	5	1	-19.3637
chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	chr8	13159388	13165854	protein_coding	Lamp1	exon	ENSMUSG00000031447	ProperStrand	92	1	-7.6507
chr2	91332858	91333907	protein_coding	Lrp4	exon	ENSMUSG00000027253	ProperStrand	16	chr9	40612893	40612921	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	1	-12.2286
chr4	57206720	57206810	protein_coding	Ptpn3	utr3	ENSMUSG00000038764	ProperStrand	48	chr7	117166756	117166836	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-5.2488
chr17	35647073	35647238	protein_coding	Pou5f1	exon	ENSMUSG00000024406	ProperStrand	104	chr7	148634765	148634839	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	3	-7.5989
chr13	54677144	54677234	protein_coding	Arl10	exon	ENSMUSG00000025870	ProperStrand	9	chr10	90581028	90581108	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	4	-21.3104
chr19	9088053	9088130	protein_coding	Ahnak	exon	ENSMUSG00000069833	ProperStrand	103	chr7	116664870	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-4.7712
chr12	110892888	110892904	snoRNA	ENSMUSG00000064621_AF357355	.	ENSMUSG00000064621	ProperStrand	60	chr16	23110454	23110515	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.4617
chr2	90235286	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	154097599	154097615	LINE	L1MEe	L1	chr4L1MEe154097378	ProperStrand	15	2	-11.6618
chr2	26493449	26493502	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr2	125608586	125608602	protein_coding	Secisbp2l	utr5	ENSMUSG00000035093	NonProperStrand	2	1	-13.6349
chr4	122968585	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	chr17	24857715	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	18	-0.7716
chr3	100864800	100864853	protein_coding	Ptgfrn	exon	ENSMUSG00000027864	ProperStrand	67	chr17	24665420	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	4	-14.8609
chr16	21214483	21214542	protein_coding	Ephb3	exon	ENSMUSG00000005958	ProperStrand	23	chr18	73693170	73693190	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-7.4314
chr9	56989707	56989886	protein_coding	Man2c1	exon	ENSMUSG00000032295	ProperStrand	13	chr7	52378398	52378462	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	1	-11.6160
chr6	48882593	48882609	protein_coding	1600015I10Rik	exon	ENSMUSG00000029813	NonProperStrand	1	chr18	33954817	33954907	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-inf
chr11	5774867	5775106	protein_coding	Pold2	exon	ENSMUSG00000020471	ProperStrand	58	chr4	131865413	131865503	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-4.0661
chr16	32614672	32615380	protein_coding	Tfrc	exon	ENSMUSG00000022797	ProperStrand	71	chr7	116664794	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	4	-8.3776
chr15	100299084	100299100	lincRNA	5330439K02Rik	exon	ENSMUSG00000092050	NonProperStrand	36	chr11	62416578	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-6.1698
chr12	12944235	12944251	protein_coding	Mycn	exon	ENSMUSG00000037169	NonProperStrand	109	chr11	6428075	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-3.8648
chr7	108971290	108971306	protein_coding	Inppl1	utr3	ENSMUSG00000032737	ProperStrand	272	chr2	26494708	26494763	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-0.7987
chr5	3693225	3693241	protein_coding	Ankib1	exon	ENSMUSG00000040351	NonProperStrand	98	chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	1	-8.2062
chr13	25151455	25151471	protein_coding	Dcdc2a	intron	ENSMUSG00000035910	ProperStrand	8	chr9	120038467	120038527	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-6.9869
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr6	61130054	61130715	protein_coding	Fam190a	intron	ENSMUSG00000039578	ProperStrand	28	1	-8.5561
chr5	145956930	145956949	protein_coding	Zkscan14	exon	ENSMUSG00000029627	NonProperStrand	5	chr18	6131511	6131644	protein_coding	Arhgap12	intron	ENSMUSG00000041225	ProperStrand	25	5	-inf
chr7	150293597	150293613	protein_coding	Kcnq1	exon	ENSMUSG00000009545	NonProperStrand	133	chr6	70794803	70794820	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	1	-9.8243
chr7	53493835	53493851	protein_coding	Ush1c	utr5	ENSMUSG00000030838	NonProperStrand	62	chr2	130103751	130103809	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	14	-19.7062
chr2	145077955	145209255	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	chr2	63936035	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-2.5344
chr16	8695143	8695184	protein_coding	Usp7	exon	ENSMUSG00000022710	ProperStrand	118	chr7	51505883	51505910	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	1	-7.2665
chr17	23956738	23956793	protein_coding	Srrm2	utr3	ENSMUSG00000039218	ProperStrand	521	chr11	106362668	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-3.2462
chr5	31374273	31374352	protein_coding	Cad	exon	ENSMUSG00000013629	ProperStrand	260	chr17	66798491	66798571	protein_coding	1110012J17Rik	exon	ENSMUSG00000052105	ProperStrand	60	1	-10.3738
chr9	107474912	107474966	protein_coding	Hyal2	utr3	ENSMUSG00000010047	ProperStrand	20	chr7	150717298	150717367	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-7.6970
chr18	46917663	46937976	protein_coding	Ap3s1	exon	ENSMUSG00000024480	ProperStrand	8	chr16	23110828	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-5.7082
chr10	127230897	127230987	LTR	IAPEY3-int	ERVK	chr10IAPEY3-int127229959	ProperStrand	1	chr6	92373729	92373819	protein_coding	Prickle2	intron	ENSMUSG00000030020	NonProperStrand	5	1	-inf
chr5	138604624	138604793	protein_coding	Cops6	exon	ENSMUSG00000019494	ProperStrand	12	chr12	88768676	88768766	protein_coding	Alkbh1	utr3	ENSMUSG00000079036	ProperStrand	70	1	-16.2885
chr9	44599685	44599715	protein_coding	Ift46	utr3	ENSMUSG00000002031	ProperStrand	28	chr11	62416951	62416976	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-7.5618
chr10	57837067	57837086	protein_coding	Lims1	intron	ENSMUSG00000019920	NonProperStrand	3	chr19	8799830	8799882	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-11.2482
chr12	104655991	104656307	protein_coding	Ddx24	exon	ENSMUSG00000041645	ProperStrand	34	chr3	127264747	127264819	protein_coding	4930422G04Rik	exon	ENSMUSG00000051278	ProperStrand	10	1	-17.6896
chr6	29518932	29518972	protein_coding	Tnpo3	exon	ENSMUSG00000012535	ProperStrand	58	chr19	46139582	46139598	protein_coding	Pprc1	exon	ENSMUSG00000055491	NonProperStrand	10	1	-17.1019
chr2	181330370	181330386	protein_coding	Prpf6	intron	ENSMUSG00000002455	ProperStrand	54	chr7	117190016	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.5257
chr6	135208205	135208285	LTR	ORR1A4	MaLR	chr6ORR1A4135207954	NonProperStrand	1	chr11	114214799	114214889	SINE	B4A	B4	chr11B4A114214726	ProperStrand	1	1	-inf
chr7	128302572	128302590	protein_coding	Otoa	intron	ENSMUSG00000034990	NonProperStrand	6	chr2	26494703	26494793	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-7.6788
chr7	125311361	125311461	protein_coding	Smg1	exon	ENSMUSG00000030655	ProperStrand	70	chr16	23111391	23111453	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.0543
chr16	38417222	38417241	protein_coding	Pla1a	exon	ENSMUSG00000002847	ProperStrand	32	chr9	120038467	120038531	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.2048
chr1	153196603	153196646	protein_coding	Ivns1abp	utr5	ENSMUSG00000023150	ProperStrand	51	chr2	26494707	26494821	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	7	-19.3567
chr2	172832071	172832107	protein_coding	Rae1	intron	ENSMUSG00000027509	ProperStrand	38	chr7	29547131	29551322	protein_coding	Nfkbib	exon	ENSMUSG00000030595	ProperStrand	8	1	-18.0902
chr16	21787296	21787313	protein_coding	Ehhadh	intron	ENSMUSG00000022853	ProperStrand	3	chr2	32818803	32818884	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-11.7908
chr7	52650168	52650951	protein_coding	Snrnp70	utr5	ENSMUSG00000063511	ProperStrand	61	chr12	60141330	60141410	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	5	-inf
chr7	117166723	117166841	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	chr11	6520320	6520411	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	3	-1.7078
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr18	38116113	38116129	protein_coding	Rell2	exon	ENSMUSG00000044024	NonProperStrand	43	2	-10.6179
chr8	86770260	86770292	protein_coding	D8Ertd738e	utr3	ENSMUSG00000019362	ProperStrand	7	chr4	131865853	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-18.8689
chr11	70795695	70795785	protein_coding	C1qbp	exon	ENSMUSG00000018446	ProperStrand	46	chr18	33954817	33954897	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-4.0009
chr19	31158609	31158653	protein_coding	Cstf2t	exon	ENSMUSG00000053536	ProperStrand	48	chr18	35714194	35714291	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-3.8569
chr2	29035643	29035672	protein_coding	Setx	utr3	ENSMUSG00000043535	ProperStrand	187	chr3	123210854	123210938	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-2.0562
chrX	72214248	72214264	protein_coding-noncoding	Gab3	utr3	ENSMUSG00000032750	ProperStrand	420	chr8	72474648	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-6.8829
chr8	109440140	109441505	protein_coding	Cirh1a	exon	ENSMUSG00000041438	ProperStrand	40	chr16	23110980	23111005	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.4886
chr4	21606097	21606114	protein_coding	Prdm13	exon	ENSMUSG00000040478	ProperStrand	51	chr6	38577350	38577366	protein_coding	Klrg2	utr3	ENSMUSG00000071537	NonProperStrand	37	1	-14.6213
chr7	51764967	51765149	protein_coding	Mybpc2	exon	ENSMUSG00000038670	ProperStrand	13	chr11	69483145	69483225	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	12	-inf
chr4	138921127	138921143	protein_coding	C230096C10Rik	exon	ENSMUSG00000078517	NonProperStrand	9	chr17	39985356	39985442	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-9.7848
chr15	75889933	75889976	protein_coding	Scrib	exon	ENSMUSG00000022568	ProperStrand	154	chr13	49779751	49779805	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-5.1630
chr11	7067186	7069426	protein_coding	Adcy1	exon	ENSMUSG00000020431	ProperStrand	183	chr5	124981180	124981196	protein_coding	Rilpl1	utr5	ENSMUSG00000029392	NonProperStrand	1	1	-inf
chr5	33850414	33850479	LTR	RLTR15	ERVK	chr5RLTR1533850370	NonProperStrand	1	chr11	97642952	97643038	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-inf
chr7	17040552	17040656	protein_coding	Tmem160	exon	ENSMUSG00000019158	ProperStrand	55	chr5	121658484	121658522	protein_coding	Rpl6	exon	ENSMUSG00000029614	ProperStrand	332	1	-10.0604
chr6	113024718	113024756	non_coding	Gt(ROSA)26Sor	.	ENSMUSG00000086429	ProperStrand	4	chr17	3196920	3197010	protein_coding	Scaf8	exon	ENSMUSG00000046201	ProperStrand	126	1	-17.5110
chr16	4620108	4620127	protein_coding	Glis2	intron	ENSMUSG00000014303	ProperStrand	15	chr11	74743925	74743985	protein_coding	Smg6	exon	ENSMUSG00000038290	ProperStrand	29	1	-17.6292
chr16	38525971	38526034	protein_coding	Poglut1	utr3	ENSMUSG00000034064	ProperStrand	8	chr2	31841065	31841084	pseudogene	Gm13608	.	ENSMUSG00000081480	ProperStrand	1	1	-inf
chr11	67669688	67669705	protein_coding	Usp43	exon	ENSMUSG00000020905	NonProperStrand	1	chr5	147912827	147912859	protein_coding	Polr1d	exon	ENSMUSG00000029642	ProperStrand	23	1	-inf
chrX	45379065	45379081	protein_coding	Apln	utr3	ENSMUSG00000037010	ProperStrand	4	chr11	6428090	6428157	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-8.6824
chr15	79538315	79546289	protein_coding	Gtpbp1	exon	ENSMUSG00000042535	ProperStrand	56	chr16	23111388	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	5	-7.7114
chr7	31370607	31370687	protein_coding	Wbp7	exon	ENSMUSG00000006307	ProperStrand	180	chr9	64025184	64025274	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	1	-6.4958
chr7	29136635	29136654	protein_coding	Rps16	intron	ENSMUSG00000037563	ProperStrand	191	chr7	16524136	16524219	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	1	-7.4070
chr4	108224095	108224112	protein_coding	Zcchc11	intron	ENSMUSG00000034610	NonProperStrand	9	chr5	23358028	23358061	snoRNA	ENSMUSG00000093321_Snord93	.	ENSMUSG00000093321	ProperStrand	218	1	-14.6131
chr7	134617370	134617405	protein_coding	Prr14	exon	ENSMUSG00000030822	ProperStrand	6	chr10	39978385	39978485	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-10.1727
chr17	85393353	85393457	protein_coding	Ppm1b	exon	ENSMUSG00000061130	ProperStrand	36	chr1	39605590	39605629	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	4	-inf
chr1	71107946	71108036	protein_coding	Bard1	intron	ENSMUSG00000026196	ProperStrand	44	chr17	35299550	35299630	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	4	-16.6277
chr13	29043776	29043792	protein_coding	Sox4	exon	ENSMUSG00000076431	ProperStrand	73	chr2	26494708	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.7588
chr5	68214476	68214566	protein_coding	Atp8a1	intron	ENSMUSG00000037685	ProperStrand	20	chr14	76247737	76247817	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-6.3209
chr1	145971868	145971889	LINE	L2	L2	chr1L2145971861	NonProperStrand	49	chr1	162967516	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-3.8504
chr6	70794802	70794820	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-3.4281
chr11	64949314	64949335	protein_coding	Arhgap44	intron	ENSMUSG00000033389	NonProperStrand	30	chr8	93517754	93517774	protein_coding	Chd9	intron	ENSMUSG00000056608	NonProperStrand	12	1	-18.0788
chr10	60660082	60660137	protein_coding	Adamts14	utr3	ENSMUSG00000059901	ProperStrand	17	chr19	8800355	8800445	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-5.9706
chr16	57391760	57391781	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr4	86232353	86232487	snoRNA	ENSMUSG00000088958_Scarna8	.	ENSMUSG00000088958	NonProperStrand	2	2	-inf
chr2	148462068	148462091	LTR	MTEb	MaLR	chr2MTEb148461845	NonProperStrand	1	chr5	108336428	108336495	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-inf
chr8	86518767	86519199	protein_coding	Prkaca	exon	ENSMUSG00000005469	ProperStrand	17	chr17	35087895	35087951	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-7.7141
chr6	51414110	51414171	protein_coding	Hnrnpa2b1	exon	ENSMUSG00000004980	ProperStrand	166	chr7	116663653	116663743	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-0.9798
chr16	25868023	25868049	protein_coding	Trp63	intron	ENSMUSG00000022510	NonProperStrand	10	chr5	121655016	121655099	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-7.2897
chr13	38079540	38079567	protein_coding	Ssr1	exon	ENSMUSG00000021427	ProperStrand	65	chr4	131865866	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-3.0531
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	24856620	24856752	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	9	-3.3412
chr3	151887246	151887303	protein_coding	Fubp1	intron	ENSMUSG00000028034	ProperStrand	56	chr7	116663731	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.6307
chrX	20219699	20219721	protein_coding	Rbm10	intron	ENSMUSG00000031060	ProperStrand	31	chr6	38098088	38098106	protein_coding	D630045J12Rik	intron	ENSMUSG00000063455	NonProperStrand	13	1	-17.4983
chr6	25638699	25638715	protein_coding	Gpr37	exon	ENSMUSG00000039904	ProperStrand	49	chr1	162966189	162966255	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-7.9809
chr12	98824359	98824439	LINE	L1_Mus3	L1	chr12L1_Mus398823868	ProperStrand	1	chr12	116859495	116859585	LTR	RMER13B	ERVK	chr12RMER13B116859402	ProperStrand	1	1	-inf
chr17	46539737	46542739	protein_coding	Zfp318	exon	ENSMUSG00000015597	ProperStrand	44	chr9	15118332	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	3	-9.8680
chr16	4886395	4886411	protein_coding	Mgrn1	exon	ENSMUSG00000022517	NonProperStrand	157	chr2	150152243	150152274	protein_coding	3300002I08Rik	intron	ENSMUSG00000063364	NonProperStrand	8	1	-15.5294
chr16	23110985	23111010	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr7	109272886	109273624	protein_coding	Nup98	exon	ENSMUSG00000063550	ProperStrand	100	1	-7.9924
chr15	69441570	69441660	LINE	L1_Mus4	L1	chr15L1_Mus469441138	NonProperStrand	1	chr2	110297741	110297831	LINE	L1_Mus1	L1	chr2L1_Mus1110297609	NonProperStrand	1	1	-inf
chr10	127152805	127152822	protein_coding	Myo1a	exon	ENSMUSG00000025401	NonProperStrand	2	chr4	131865867	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-8.7800
chr11	68805831	68805902	protein_coding	Pfas	exon	ENSMUSG00000020899	ProperStrand	53	chr16	72800514	72800532	protein_coding	Robo1	intron	ENSMUSG00000022883	NonProperStrand	188	1	-11.2721
chr1	49742476	49742494	LTR	ORR1D2	MaLR	chr1ORR1D249742474	NonProperStrand	1	chr10	29179827	29179849	protein_coding	Rspo3	intron	ENSMUSG00000019880	NonProperStrand	3	1	-inf
chr11	14961829	14961849	LINE	Lx	L1	chr11Lx14961726	ProperStrand	93	chr18	35714209	35714260	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-2.6597
chr5	135699072	135702463	protein_coding	Baz1b	exon	ENSMUSG00000002748	ProperStrand	83	chr11	62418015	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	6	-19.0779
chr3	33963225	33967085	protein_coding	Fxr1	exon	ENSMUSG00000027680	ProperStrand	58	chr7	118219575	118219609	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-4.2347
chr3	116126898	116126914	protein_coding	Cdc14a	utr5	ENSMUSG00000033502	ProperStrand	29	chr2	130101987	130102046	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-6.7943
chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	chr9	50816824	50816841	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	1	-8.3725
chr9	99217112	99217128	protein_coding	Esyt3	exon	ENSMUSG00000037681	ProperStrand	7	chr5	73563222	73563238	protein_coding	Fryl	intron	ENSMUSG00000070733	ProperStrand	173	1	-15.6264
chr4	133090152	133090252	protein_coding	Nudc	exon	ENSMUSG00000028851	ProperStrand	80	chr17	24857806	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.8304
chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr1	192712615	192712631	protein_coding	Rps6kc1	exon	ENSMUSG00000089872	ProperStrand	241	1	-1.2874
chr10	94051489	94051523	protein_coding	Tmcc3	utr3	ENSMUSG00000020023	ProperStrand	23	chr9	103950068	103950086	protein_coding	Uba5	intron	ENSMUSG00000032557	ProperStrand	111	1	-14.0189
chr7	63179763	63180508	protein_coding	Cyfip1	exon	ENSMUSG00000030447	ProperStrand	23	chrX	83547356	83547372	protein_coding	Mageb4	intron	ENSMUSG00000035427	NonProperStrand	191	2	-19.0650
chr13	23578145	23578162	protein_coding	Btn2a2	exon	ENSMUSG00000053216	ProperStrand	1	chr16	23110894	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr6	124662734	124663087	protein_coding	Phb2	exon	ENSMUSG00000004264	ProperStrand	43	chr11	97642971	97643061	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.0564
chr3	68834285	68835350	protein_coding	Smc4	exon	ENSMUSG00000034349	ProperStrand	21	chr7	88674817	88674867	snoRNA	ENSMUSG00000093107_AC167122.1	.	ENSMUSG00000093107	ProperStrand	110	1	-14.2310
chr13	98804389	98804469	protein_coding	Rgnef	intron	ENSMUSG00000021662	ProperStrand	30	chr9	95918509	95918584	protein_coding	Xrn1	exon	ENSMUSG00000032410	ProperStrand	12	1	-18.0788
chr13	21692547	21692637	LINE	L1Md_F2	L1	chr13L1Md_F221692214	ProperStrand	1	chrX	100741311	100741401	LINE	L1Md_F2	L1	chrXL1Md_F2100741217	ProperStrand	2	1	-inf
chr7	134868242	134868266	protein_coding	Ctf2	intron	ENSMUSG00000060034	NonProperStrand	2	chr19	8798483	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-inf
chr16	10990057	10990074	protein_coding	Litaf	intron	ENSMUSG00000022500	ProperStrand	25	chrX	84483704	84483720	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-10.0149
chr11	119797803	119797873	antisense	Gm11767	.	ENSMUSG00000085207	ProperStrand	1	chr4	131908258	131908343	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-inf
chr1	137366509	137366609	protein_coding	Nav1	exon	ENSMUSG00000009418	ProperStrand	38	chr4	131865497	131865517	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	7	-inf
chr6	124764066	124764083	protein_coding	Tpi1	exon	ENSMUSG00000023456	ProperStrand	94	chr14	65372825	65372889	snoRNA	ENSMUSG00000064442_SNORA36	.	ENSMUSG00000064442	ProperStrand	296	2	-14.5837
chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	chr2	158185620	158185671	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-1.4358
chr10	127527215	127527232	protein_coding	Atp5b	utr3	ENSMUSG00000025393	NonProperStrand	9	chr9	15119733	15119768	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-6.2797
chr7	148510783	148510851	protein_coding	Deaf1	intron	ENSMUSG00000058886	ProperStrand	23	chr8	73419687	73419777	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	10	-20.4469
chr3	90016883	90016950	protein_coding	Rps27	exon	ENSMUSG00000090733	ProperStrand	40	chr2	26494708	26494808	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.8534
chr9	58402857	58402879	protein_coding	Cd276	utr5	ENSMUSG00000035914	ProperStrand	19	chr11	120134685	120134701	protein_coding	Bahcc1	exon	ENSMUSG00000039741	ProperStrand	118	1	-14.2884
chr7	116663633	116663768	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	chr15	79908928	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	24	-0.7485
chr4	131908696	131908809	lincRNA	Gm17300	intron	ENSMUSG00000091021	ProperStrand	109	chr1	88247738	88247778	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	NonProperStrand	6	2	-19.5900
chr8	73319249	73319326	protein_coding	Mast3	intron	ENSMUSG00000031833	ProperStrand	23	chr10	23505152	23505199	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-4.8598
chr17	27649644	27649660	protein_coding	Grm4	intron	ENSMUSG00000063239	ProperStrand	147	chr11	106362671	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-5.6365
chr12	52982236	52985340	protein_coding	Heatr5a	exon	ENSMUSG00000035181	ProperStrand	21	chr5	139710483	139710510	protein_coding	Sun1	exon	ENSMUSG00000036817	ProperStrand	108	3	-19.5686
chr14	71753380	71753403	DNA	Tigger7	MER2_type	chr14Tigger771753194	NonProperStrand	1	chr7	116664809	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-inf
chr3	104647880	104647896	protein_coding	Capza1	exon	ENSMUSG00000070372	NonProperStrand	1	chr2	166890840	166890858	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	1	-inf
chr7	148377965	148378045	protein_coding-noncoding	Hras1	utr3	ENSMUSG00000025499	NonProperStrand	1	chr7	148378090	148378180	protein_coding	Hras1	exon	ENSMUSG00000025499	NonProperStrand	1	1	-inf
chr14	111102302	111102318	LINE	Lx3_Mus	L1	chr14Lx3_Mus111100808	NonProperStrand	7	chr2	90235299	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	1	-8.8025
chr13	59658539	59658555	protein_coding	Agtpbp1	utr5	ENSMUSG00000021557	NonProperStrand	5	chr17	24857716	24857775	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-7.1522
chr1	23422790	23422808	LINE	Lx9	L1	chr1Lx923422640	ProperStrand	2	chr2	25863334	25863386	protein_coding	Ubac1	exon	ENSMUSG00000036352	ProperStrand	25	1	-20.8701
chr10	80643010	80643090	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr3	34550502	34550592	protein_coding	Sox2	utr3	ENSMUSG00000074637	ProperStrand	299	1	-3.0536
chr15	72935931	72936005	protein_coding	Eif2c2	utr3	ENSMUSG00000036698	ProperStrand	154	chr12	88778632	88778722	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-4.6606
chr7	116664794	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	chr1	59761635	59761716	snoRNA	ENSMUSG00000089093_Snord11	.	ENSMUSG00000089093	ProperStrand	193	5	-5.5067
chr2	177293769	177293835	protein_coding	Gm14403	exon	ENSMUSG00000067480	ProperStrand	3	chr1	162965532	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-inf
chr4	53015201	53015217	SINE	B1F1	Alu	chr4B1F153015138	ProperStrand	102	chr9	44143926	44143986	protein_coding	H2afx	utr3	ENSMUSG00000049932	ProperStrand	137	1	-10.5898
chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr17	24665437	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	3	-1.8946
chr17	39985207	39985286	pseudogene	AY036118	.	ENSMUSG00000045999	ProperStrand	57	chr17	35299552	35299642	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	NonProperStrand	14	1	-16.3974
chr3	52790340	52793059	protein_coding	Cog6	exon	ENSMUSG00000027742	NonProperStrand	4	chr2	101678410	101678426	protein_coding	Prr5l	utr5	ENSMUSG00000032841	NonProperStrand	9	1	-19.8837
chr5	136390488	136390548	protein_coding	Ywhag	intron	ENSMUSG00000051391	ProperStrand	142	chr3	95980322	95980410	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-5.1673
chr13	46779306	46779350	protein_coding	Nup153	exon	ENSMUSG00000021374	ProperStrand	69	chr7	116664819	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-6.1980
chr13	95856366	95856384	protein_coding	Pde8b	intron	ENSMUSG00000021684	ProperStrand	43	chr7	86839721	86839759	protein_coding	5730590G19Rik	exon	ENSMUSG00000046591	ProperStrand	45	1	-14.5742
chr5	140276360	140276460	protein_coding	Mafk	exon	ENSMUSG00000018143	ProperStrand	4	chr5	130300493	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-7.9077
chr8	87414624	87414643	protein_coding	Gcdh	exon	ENSMUSG00000003809	ProperStrand	10	chr11	69483136	69483262	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	4	-18.4554
chr16	76292370	76292460	protein_coding	Nrip1	exon	ENSMUSG00000048490	ProperStrand	50	chr11	69481350	69481430	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	16	-19.8368
chr9	64930084	64930174	protein_coding	Dpp8	utr3	ENSMUSG00000032393	ProperStrand	31	chr19	8800358	8800438	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	7	-20.1180
chr7	29602785	29602845	protein_coding	Hnrnpl	intron	ENSMUSG00000015165	ProperStrand	150	chr15	79908955	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-3.7239
chr11	53080472	53080577	protein_coding	Hspa4	exon	ENSMUSG00000020361	ProperStrand	69	chr8	13416898	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	5	-19.4673
chr2	127058781	127058922	protein_coding	Snrnp200	exon	ENSMUSG00000003660	ProperStrand	203	chr5	74489583	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-1.6819
chrX	84483699	84483715	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr2	25702680	25702696	protein_coding	Sohlh1	exon	ENSMUSG00000059625	ProperStrand	22	1	-10.2755
chr10	75885245	75885268	protein_coding	Pcnt	intron	ENSMUSG00000001151	ProperStrand	127	chr7	116663636	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.3331
chr11	69466251	69466331	protein_coding	Fxr2	utr3	ENSMUSG00000018765	ProperStrand	40	chr16	56035873	56035963	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	1	-9.7611
chr15	28168294	28168311	protein_coding	Dnahc5	exon	ENSMUSG00000022262	NonProperStrand	18	chr11	62416575	62416621	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-7.5628
chr12	17556567	17556733	protein_coding	Odc1	exon	ENSMUSG00000011179	ProperStrand	173	chrX	34622903	34622993	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-1.4277
chr9	96101554	96101587	protein_coding	Tfdp2	intron	ENSMUSG00000032411	ProperStrand	95	chr3	144748059	144749264	protein_coding	Clca5	exon	ENSMUSG00000036960	ProperStrand	86	1	-11.6662
chr2	90235301	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	118376503	118376519	protein_coding	Nos1	exon	ENSMUSG00000029361	NonProperStrand	237	1	-2.0093
chr9	92437231	92437300	protein_coding	Plod2	utr5	ENSMUSG00000032374	ProperStrand	52	chr7	116664792	116664882	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.7980
chr12	3469496	3469512	protein_coding	Asxl2	exon	ENSMUSG00000037486	NonProperStrand	12	chr2	130103751	130103811	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	2	-18.0833
chrX	98752181	98752220	protein_coding	Taf1	exon	ENSMUSG00000031314	ProperStrand	61	chr4	98403722	98403748	protein_coding	L1td1	exon	ENSMUSG00000087166	ProperStrand	43	1	-13.9501
chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	chr4	131866209	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-2.0287
chr10	75322164	75322190	protein_coding	Mif	utr3	ENSMUSG00000033307	ProperStrand	146	chr18	35716795	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-0.8878
chr7	116664923	116664978	protein_coding	Rpl27a	intron	ENSMUSG00000046364	ProperStrand	149	chr18	35716763	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-0.8639
chr18	84646812	84646892	protein_coding	Zfp407	intron	ENSMUSG00000048410	NonProperStrand	16	chr11	93089108	93089198	protein_coding	Car10	intron	ENSMUSG00000056158	NonProperStrand	7	1	-inf
chr15	99329179	99329196	protein_coding	Faim2	utr3	ENSMUSG00000023011	ProperStrand	45	chr6	71832550	71832683	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-6.1773
chr19	5796449	5796498	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr11	69470247	69470280	protein_coding	Mpdu1	utr3	ENSMUSG00000018761	ProperStrand	11	2	-17.4228
chr4	8793162	8793179	protein_coding	Chd7	exon	ENSMUSG00000041235	ProperStrand	80	chr11	6428103	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.6817
chr16	93800228	93800348	protein_coding	Dopey2	exon	ENSMUSG00000022946	ProperStrand	22	chr16	23110918	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.8207
chr10	57887296	57887396	protein_coding	Lims1	utr3	ENSMUSG00000019920	ProperStrand	6	chr16	23110986	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.7876
chr1	162966004	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	chr17	26360446	26360590	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	5	-6.0793
chr10	23506228	23506328	protein_coding	Rps12	intron	ENSMUSG00000061983	ProperStrand	309	chr11	106362336	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-2.7644
chr11	106852569	106852591	protein_coding	Kpna2	exon	ENSMUSG00000018362	ProperStrand	70	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-5.1842
chr1	51831182	51833060	protein_coding	Myo1b	exon	ENSMUSG00000018417	ProperStrand	31	chr18	35714145	35714235	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.6912
chr18	39934974	39934990	protein_coding	Pabpc2	exon	ENSMUSG00000051732	NonProperStrand	66	chr8	73419662	73419722	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.9596
chr2	25876942	25877032	protein_coding	Ubac1	exon	ENSMUSG00000036352	ProperStrand	25	chr5	108334204	108334284	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-6.5433
chr13	74460517	74460582	protein_coding	Sdha	utr3	ENSMUSG00000021577	ProperStrand	70	chr17	24857740	24857830	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	11	-21.4507
chr16	37384897	37384913	protein_coding	Stxbp5l	utr5	ENSMUSG00000022829	ProperStrand	332	chr11	101296676	101296710	protein_coding	Rundc1	utr3	ENSMUSG00000035007	ProperStrand	6	1	-14.6357
chr8	113414139	113414216	protein_coding	Fuk	exon	ENSMUSG00000033703	ProperStrand	18	chr18	35714145	35714236	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-5.7628
chr10	79138266	79138282	protein_coding	Gm16517	exon	ENSMUSG00000020308	ProperStrand	43	chrX	166428417	166428481	protein_coding	Mid1	utr3	ENSMUSG00000035299	ProperStrand	209	1	-11.4824
chr5	74489543	74489563	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr9	108110535	108110630	protein_coding	Dag1	exon	ENSMUSG00000039952	ProperStrand	54	2	-9.5038
chr6	71554134	71557449	protein_coding	Kdm3a	exon	ENSMUSG00000053470	ProperStrand	41	chr7	116664841	116664924	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.2237
chr2	172182644	172182687	protein_coding	Aurka	exon	ENSMUSG00000027496	ProperStrand	31	chr7	116664811	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	8	-20.3589
chr11	87172190	87172206	protein_coding	Ppm1e	exon	ENSMUSG00000046442	ProperStrand	112	chr11	69483197	69483265	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.4601
chr11	62270322	62270339	protein_coding	Ncor1	intron	ENSMUSG00000018501	ProperStrand	132	chr9	120038492	120038513	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.7192
chrX	45807237	45807293	protein_coding	Elf4	utr5	ENSMUSG00000031103	ProperStrand	7	chr15	101927104	101927131	protein_coding	Eif4b	utr3	ENSMUSG00000058655	ProperStrand	484	1	-13.5577
chr10	118648277	118648311	protein_coding	Cand1	exon	ENSMUSG00000020114	ProperStrand	76	chr7	29136561	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	4	-7.5691
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr4	131866158	131866292	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-0.7231
chr14	9003822	9003867	protein_coding	Pdhb	intron	ENSMUSG00000021748	ProperStrand	28	chr11	62418015	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-7.0687
chr16	96233408	96233508	protein_coding	Brwd1	exon	ENSMUSG00000022914	ProperStrand	77	chr19	8798769	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-4.3236
chr8	108233712	108233730	protein_coding	4933405L10Rik	exon	ENSMUSG00000013158	ProperStrand	94	chr11	69483136	69483211	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-4.8885
chr15	79908956	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	chr16	43886794	43886859	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	4	-4.5219
chr6	50307610	50307627	protein_coding	Osbpl3	intron	ENSMUSG00000029822	ProperStrand	34	chr9	78326553	78326605	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-7.4656
chr8	108233711	108233729	protein_coding	4933405L10Rik	exon	ENSMUSG00000013158	ProperStrand	94	chr2	26493366	26493449	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-2.9258
chr8	74008400	74008417	protein_coding	Ano8	exon	ENSMUSG00000034863	NonProperStrand	171	chr2	26494715	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.3932
chr15	99539819	99539843	protein_coding	Smarcd1	exon	ENSMUSG00000023018	ProperStrand	43	chr11	62416969	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	2	-10.8300
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	65308869	65308886	protein_coding	Spg21	utr5	ENSMUSG00000032388	NonProperStrand	10	1	-8.0457
chrX	47922706	47922784	lincRNA	6720401G13Rik	intron	ENSMUSG00000085396	ProperStrand	34	chr16	23110454	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-8.7153
chr11	80965641	80965658	protein_coding	Accn1	exon	ENSMUSG00000020704	NonProperStrand	228	chr4	116826697	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-4.1892
chr2	90235316	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	127032977	127033031	protein_coding	Gjb5	exon	ENSMUSG00000042357	ProperStrand	9	1	-8.2671
chrX	11635066	11635104	protein_coding	Bcor	exon	ENSMUSG00000040363	ProperStrand	20	chr7	51505539	51505591	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	1	-11.0043
chr9	78023108	78023181	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr9	35018882	35018966	protein_coding	Srpr	exon	ENSMUSG00000032042	ProperStrand	54	2	-9.8913
chr18	75979993	75980011	protein_coding	Zbtb7c	utr5	ENSMUSG00000044646	ProperStrand	64	chr11	6519810	6519944	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-7.8137
chr14	22651104	22652143	protein_coding	Vdac2	exon	ENSMUSG00000021771	ProperStrand	18	chr10	23505151	23505240	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-5.5683
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr1	173073702	173073718	protein_coding	Sdhc	exon	ENSMUSG00000058076	NonProperStrand	3	1	-inf
chr9	120039557	120039688	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	chr9	64022855	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	8	-3.5872
chr1	53583349	53583366	LTR	RLTR13D4	ERVK	chr1RLTR13D453582368	ProperStrand	1	chr7	135048621	135048756	protein_coding	Bckdk	exon	ENSMUSG00000030802	ProperStrand	26	1	-inf
chrX	38831793	38831810	protein_coding	Gria3	exon	ENSMUSG00000001986	ProperStrand	32	chr5	92485118	92485218	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	1	-10.0058
chr2	26493424	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr8	73419655	73419783	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	14	-1.5623
chr15	89124920	89125576	protein_coding	Sbf1	exon	ENSMUSG00000036529	ProperStrand	85	chr7	148634727	148634827	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-3.3410
chr5	74489264	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr17	13115667	13115757	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	1	-0.7486
chr11	102063519	102063621	protein_coding	Hdac5	exon	ENSMUSG00000008855	ProperStrand	45	chr1	162967514	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.0106
chr8	28338391	28338450	protein_coding	Adrb3	exon	ENSMUSG00000031489	ProperStrand	3	chr12	106269353	106269443	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-10.4002
chr7	123476556	123476590	protein_coding	Rps13	exon	ENSMUSG00000090862	ProperStrand	36	chr7	116663711	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-5.8578
chr15	12802431	12802521	protein_coding	Drosha	intron	ENSMUSG00000022191	ProperStrand	163	chr2	63936034	63936053	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	3	-13.5448
chr11	23170910	23170970	protein_coding	Xpo1	intron	ENSMUSG00000020290	ProperStrand	123	chrX	71517859	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-5.1394
chr6	120153706	120164955	protein_coding	B4galnt3	exon	ENSMUSG00000041372	ProperStrand	36	chr11	69481333	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	9	-inf
chr9	15118332	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	chr9	40612077	40612151	snoRNA	ENSMUSG00000075924_Snord14d	.	ENSMUSG00000075924	ProperStrand	131	1	-2.1051
chr3	88360704	88360794	protein_coding	Ubqln4	exon	ENSMUSG00000008604	ProperStrand	49	chr4	131865896	131865976	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.0906
chr6	31170504	31194107	lincRNA	2210408F21Rik	exon	ENSMUSG00000087380	NonProperStrand	4	chr16	43166885	43166905	protein_coding	Zbtb20	intron	ENSMUSG00000022708	NonProperStrand	13	1	-19.7889
chr1	71341491	71341508	protein_coding	Abca12	exon	ENSMUSG00000050296	NonProperStrand	143	chr7	148634749	148634836	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-4.2818
chr3	35992321	35992421	protein_coding	Acad9	utr3	ENSMUSG00000027710	ProperStrand	11	chr3	95692199	95692215	protein_coding	C920021L13Rik	utr3	ENSMUSG00000080727	ProperStrand	3	1	-22.5261
chr13	56661731	56661811	LTR	MLT2D	ERVL	chr13MLT2D56661708	ProperStrand	1	chr13	56661562	56661652	SINE	RSINE1	B4	chr13RSINE156661525	NonProperStrand	1	1	-inf
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-5.0836
chr16	4785929	4785987	protein_coding	5730403B10Rik	intron	ENSMUSG00000004071	ProperStrand	5	chr5	122691914	122691930	protein_coding	Hvcn1	utr3	ENSMUSG00000064267	ProperStrand	182	1	-16.2071
chr5	29317812	29317829	LINE	Lx7	L1	chr5Lx729317715	ProperStrand	19	chr16	23110962	23110999	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-3.1937
chr5	138176733	138176750	protein_coding	6430598A04Rik	exon	ENSMUSG00000045348	NonProperStrand	7	chr4	131865413	131865503	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	4	-inf
chr11	70808362	70808461	protein_coding	Dhx33	intron	ENSMUSG00000040620	ProperStrand	41	chr8	64017611	64028375	protein_coding	Palld	exon	ENSMUSG00000058056	NonProperStrand	125	1	-12.6078
chr11	74978326	74978342	protein_coding	Hic1	utr3	ENSMUSG00000043099	ProperStrand	1	chr19	8800409	8800443	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-inf
chr7	122966867	122966884	protein_coding	Sox6	intron	ENSMUSG00000051910	ProperStrand	18	chr15	102495616	102496198	protein_coding	Atp5g2	exon	ENSMUSG00000062683	ProperStrand	32	1	-16.9757
chr19	10704261	10704302	protein_coding	Ddb1	utr3	ENSMUSG00000024740	ProperStrand	304	chr5	121655016	121655087	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-1.0899
chr15	76736586	76736625	protein_coding	Rpl8	exon	ENSMUSG00000003970	ProperStrand	191	chr2	162908423	162908989	protein_coding	Mybl2	exon	ENSMUSG00000017861	ProperStrand	230	1	-8.3017
chr5	65986142	65986195	protein_coding	Ube2k	utr3	ENSMUSG00000029203	ProperStrand	289	chr10	12728475	12728541	protein_coding	Sf3b5	exon	ENSMUSG00000078348	ProperStrand	3	1	-16.5897
chr18	82662186	82662202	protein_coding	Mbp	intron	ENSMUSG00000041607	NonProperStrand	185	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-6.6861
chr12	110888880	110888911	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-1.6475
chr13	12682037	12682068	protein_coding	Ero1lb	intron	ENSMUSG00000057069	ProperStrand	15	chr9	15118284	15118321	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-10.0759
chr3	89891479	89892336	protein_coding	Tpm3	exon	ENSMUSG00000027940	ProperStrand	55	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	4	-12.3837
chr4	68423440	68423456	protein_coding	Dbc1	exon	ENSMUSG00000028351	ProperStrand	78	chr8	54599641	54599658	protein_coding	Aga	exon	ENSMUSG00000031521	ProperStrand	7	1	-17.3282
chr12	44844127	44844156	snoRNA	ENSMUSG00000065004_SNORA33	.	ENSMUSG00000065004	ProperStrand	111	chr3	123210912	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-2.2359
chr5	121655016	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	chr7	150717298	150717420	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	16	-2.3125
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr1	72272814	72272935	snRNA	ENSMUSG00000075752_U2	.	ENSMUSG00000075752	ProperStrand	535	7	-18.9808
chr2	91097395	91097414	protein_coding	Pacsin3	intron	ENSMUSG00000027257	NonProperStrand	1	chr11	106362338	106362365	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-inf
chr14	51427299	51427392	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr2	91117644	91117668	protein_coding	1110051M20Rik	intron	ENSMUSG00000040591	NonProperStrand	11	3	-19.0151
chr3	107948912	107948952	protein_coding	Gnai3	utr5	ENSMUSG00000000001	ProperStrand	48	chr4	131865380	131865447	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	2	-7.3813
chr11	98878445	98878471	protein_coding-noncoding	Top2a	utr3	ENSMUSG00000020914	ProperStrand	18	chr9	15119646	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	10	-19.9738
chr14	31827477	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	chr8	73419656	73419756	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	12	-2.7185
chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	chr1	95334887	95334916	protein_coding	Hdlbp	exon	ENSMUSG00000034088	ProperStrand	97	1	-9.5123
chr13	55696861	55696938	protein_coding	Tmed9	exon	ENSMUSG00000058569	ProperStrand	35	chr7	109239071	109239087	protein_coding	Trpc2	exon	ENSMUSG00000070425	NonProperStrand	26	1	-16.0966
chrX	70904604	70904625	protein_coding	Pnck	utr5	ENSMUSG00000002012	ProperStrand	10	chr8	106942360	106942376	protein_coding	Dync1li2	utr3	ENSMUSG00000035770	ProperStrand	75	1	-16.5813
chr7	17040701	17040717	protein_coding	Tmem160	exon	ENSMUSG00000019158	ProperStrand	55	chr10	61734509	61734562	protein_coding	Hk1	exon	ENSMUSG00000037012	ProperStrand	84	1	-12.8146
chr2	179913568	179933520	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr17	24857717	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	12	-10.3172
chr12	111891500	111891608	protein_coding	Dync1h1	intron	ENSMUSG00000018707	ProperStrand	648	chr16	23110529	23110558	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	5	-0.8501
chr11	6428035	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr12	92811869	92812016	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	15	-14.3000
chr2	170337006	170337022	protein_coding	Pfdn4	utr5	ENSMUSG00000052033	ProperStrand	55	chr7	117190017	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.4918
chr1	162968212	162968273	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	chr13	23392031	23392066	tRNA	tRNA97-ValCAC	.	329958	ProperStrand	52	2	-11.4237
chr9	120038610	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	chr13	51743567	51743704	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	9	-0.9340
chr9	99483976	99484005	protein_coding	Dbr1	exon	ENSMUSG00000032469	ProperStrand	162	chr11	106362339	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	2	-6.6097
chr11	113523870	113523887	protein_coding	Cog1	utr3	ENSMUSG00000018661	ProperStrand	51	chr19	8798742	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-5.1157
chr4	44043716	44043796	protein_coding	Clta	intron	ENSMUSG00000028478	ProperStrand	59	chr4	46808582	46808672	protein_coding	Gabbr2	intron	ENSMUSG00000039809	NonProperStrand	14	1	-16.3279
chr1	12797998	12798048	protein_coding	Sulf1	exon	ENSMUSG00000016918	ProperStrand	22	chr11	97642952	97643007	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.3090
chr12	70327365	70327381	protein_coding	Pole2	exon	ENSMUSG00000020974	ProperStrand	6	chr8	91552305	91552356	protein_coding	Sall1	exon	ENSMUSG00000031665	ProperStrand	96	1	-17.0538
chr2	164617939	164617955	protein_coding	Snx21	utr3	ENSMUSG00000050373	ProperStrand	1	chr19	8799022	8799079	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-inf
chr5	100465642	100465952	protein_coding	Hnrpdl	exon	ENSMUSG00000029328	ProperStrand	39	chr18	76306627	76306643	protein_coding	Zbtb7c	utr3	ENSMUSG00000044646	ProperStrand	64	1	-14.0472
chrX	130231413	130231503	lincRNA	Gm16795	intron	ENSMUSG00000087251	NonProperStrand	1	chr1	79603796	79603876	protein_coding	Ap1s3	utr3	ENSMUSG00000054702	NonProperStrand	11	1	-inf
chr13	58228863	58228879	protein_coding	Hnrnpa0	exon	ENSMUSG00000007836	NonProperStrand	7	chr8	73419657	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-7.3719
chr3	88162586	88162602	protein_coding	Smg5	exon	ENSMUSG00000001415	ProperStrand	70	chr11	106362556	106362618	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-7.0977
chr7	128850728	128850745	protein_coding	Usp31	exon	ENSMUSG00000063317	ProperStrand	35	chr4	131865855	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-4.6795
mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr15	82980122	82980222	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	6	-6.3496
chr3	94167315	94167331	protein_coding	C2cd4d	utr5	ENSMUSG00000091648	ProperStrand	30	chr16	23110913	23111003	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0481
chr15	55371686	55371744	protein_coding	Mrpl13	exon	ENSMUSG00000022370	ProperStrand	11	chr5	108336363	108336408	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	3	-19.0916
chr4	62318892	62318908	protein_coding	Rgs3	utr3	ENSMUSG00000059810	ProperStrand	40	chr8	32260335	32260385	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-5.4169
chr4	140756396	140756432	protein_coding	Fbxo42	exon	ENSMUSG00000028920	ProperStrand	91	chr1	162966210	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	3	-15.3219
chr15	97811960	97812966	protein_coding	Col2a1	exon	ENSMUSG00000022483	ProperStrand	34	chr4	132530098	132530117	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	1	-10.7458
chr2	179943023	179943054	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr15	98350146	98350196	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-1.5835
chr1	154944674	154944774	protein_coding	Nmnat2	intron	ENSMUSG00000042751	ProperStrand	39	chr7	116664870	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	8	-19.1714
chr11	20012671	20012689	protein_coding	Actr2	intron	ENSMUSG00000020152	NonProperStrand	17	chr9	103950068	103950086	protein_coding	Uba5	intron	ENSMUSG00000032557	ProperStrand	111	1	-14.6433
chr9	98391068	98391085	protein_coding	Rbp2	exon	ENSMUSG00000032454	ProperStrand	5	chr4	131908688	131908797	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-9.7750
chr11	85651938	85651954	protein_coding	Tbx2	exon	ENSMUSG00000000093	NonProperStrand	14	chr12	12944235	12944251	protein_coding	Mycn	exon	ENSMUSG00000037169	NonProperStrand	109	1	-15.0730
chr11	62416969	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	chr4	56910496	56910615	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	4	-2.0453
chr5	100855903	100855942	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr10	87929183	87929283	protein_coding	Sycp3	exon	ENSMUSG00000020059	ProperStrand	27	21	-inf
chr2	77784046	77784064	protein_coding	Cwc22	intron	ENSMUSG00000027014	NonProperStrand	6	chrX	34622906	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-7.7498
chr16	38516787	38516836	protein_coding-noncoding	4930455C21Rik	utr3	ENSMUSG00000002846	ProperStrand	1	chr13	69027157	69027177	protein_coding	Adcy2	intron	ENSMUSG00000021536	NonProperStrand	16	1	-inf
chr17	27559700	27559717	protein_coding	Grm4	utr3	ENSMUSG00000063239	ProperStrand	147	chr1	162965559	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-3.2218
chr4	57268565	57268583	protein_coding	Ptpn3	intron	ENSMUSG00000038764	ProperStrand	48	chr9	120038494	120038552	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.4442
chr11	33060415	33060832	protein_coding	Npm1	exon	ENSMUSG00000057113	ProperStrand	352	chr2	26494771	26494829	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-1.1552
chr5	53153727	53158834	protein_coding	Pi4k2b	exon	ENSMUSG00000029186	ProperStrand	27	chr12	88778627	88778755	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	6	-inf
chr3	52388277	52388294	SINE	B4A	B4	chr3B4A52388218	ProperStrand	169	chr7	34999352	34999416	protein_coding	Gpi1	intron	ENSMUSG00000036427	ProperStrand	288	2	-12.9078
chr19	44545133	44545223	LTR	MT2B	ERVL	chr19MT2B44544986	NonProperStrand	1	chr19	44544866	44544956	LTR	ORR1D2	MaLR	chr19ORR1D244544770	ProperStrand	1	1	-inf
chr19	27500347	27500411	protein_coding	D19Bwg1357e	exon	ENSMUSG00000041360	ProperStrand	110	chr19	8798507	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-4.0514
chr11	70791964	70791993	protein_coding	C1qbp	exon	ENSMUSG00000018446	ProperStrand	46	chr11	69481352	69481467	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.6886
chr9	120037897	120037987	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	chr5	135529908	135529988	snoRNA	ENSMUSG00000088008_SCARNA20	.	ENSMUSG00000088008	ProperStrand	139	17	-19.2001
chr18	21054478	21054494	protein_coding	Trappc8	exon	ENSMUSG00000033382	ProperStrand	43	chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	1	-10.1595
chr19	10519484	10519500	protein_coding	Syt7	intron	ENSMUSG00000024743	ProperStrand	11	chr18	35714143	35714200	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-6.7643
chr5	53450880	53450899	protein_coding	Slc34a2	intron	ENSMUSG00000029188	ProperStrand	4	chr9	120038552	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	3	-21.1857
chr6	90417321	90417338	protein_coding	Klf15	exon	ENSMUSG00000030087	NonProperStrand	2	chr17	24857730	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-9.4368
chr1	176413728	176413746	LTR	MT2A	ERVL	chr1MT2A176413695	ProperStrand	1	mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	1	-inf
chr1	183746875	183746948	protein_coding	Lbr	utr3	ENSMUSG00000004880	ProperStrand	97	chr6	112689098	112689322	protein_coding	Srgap3	exon	ENSMUSG00000030257	NonProperStrand	208	2	-15.5377
chr4	53088358	53088448	protein_coding	Abca1	exon	ENSMUSG00000015243	ProperStrand	15	chr16	23110891	23110971	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.0842
chr1	153208726	153208742	protein_coding	Ivns1abp	exon	ENSMUSG00000023150	ProperStrand	51	chr4	117317879	117317929	protein_coding	Eri3	intron	ENSMUSG00000033423	ProperStrand	246	1	-10.8116
chr13	97422086	97422130	protein_coding	Hmgcr	exon	ENSMUSG00000021670	ProperStrand	56	chr1	93342189	93345290	protein_coding	Per2	exon	ENSMUSG00000055866	ProperStrand	114	1	-12.1636
chr1	64579650	64579669	protein_coding	Creb1	intron	ENSMUSG00000025958	NonProperStrand	10	chr15	75725996	75726167	protein_coding	Eef1d	exon	ENSMUSG00000055762	ProperStrand	99	1	-15.9895
chr5	144267747	144268290	protein_coding	Rac1	utr3	ENSMUSG00000001847	ProperStrand	32	chr9	15119646	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-9.3323
chr15	84851764	84851781	protein_coding	Upk3a	exon	ENSMUSG00000022435	NonProperStrand	4	chr16	23111448	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-6.3168
chr15	76201639	76201726	protein_coding	Fam203a	utr3	ENSMUSG00000022554	ProperStrand	13	chr1	162966007	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-10.7546
chr7	109147633	109147707	protein_coding	Numa1	exon	ENSMUSG00000066306	ProperStrand	148	chr2	26493378	26493478	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-2.1506
chr13	88569462	88569482	LTR	RMER6D	ERVK	chr13RMER6D88569354	ProperStrand	42	chr19	43810197	43810222	protein_coding	Cox15	utr3	ENSMUSG00000040018	ProperStrand	21	1	-16.1298
chr1	37921891	37921907	protein_coding	Tsga10	utr5	ENSMUSG00000060771	NonProperStrand	1	chr11	77995229	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-inf
chr19	46464258	46464306	protein_coding	Actr1a	intron	ENSMUSG00000025228	ProperStrand	27	chr18	35716839	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.5820
chr14	76247709	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	chr4	116827118	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	7	-2.5909
chr8	26825535	26825552	protein_coding	Whsc1l1	utr3	ENSMUSG00000054823	ProperStrand	36	chr19	8799021	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	4	-20.9319
chr7	13892919	13892995	protein_coding	Lig1	exon	ENSMUSG00000056394	ProperStrand	89	chr4	131866155	131866245	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-5.1027
chr4	43505793	43505873	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr5	35172342	35172432	protein_coding	Htt	exon	ENSMUSG00000029104	ProperStrand	73	2	-4.7558
chr11	60001911	60001927	protein_coding	Rai1	exon	ENSMUSG00000062115	NonProperStrand	81	chr5	74489574	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-3.2265
chr8	109185827	109185848	protein_coding	Cdh1	exon	ENSMUSG00000000303	ProperStrand	283	chr9	120037953	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-1.9301
chr18	36591998	36610770	protein_coding	Pfdn1	exon	ENSMUSG00000024346	ProperStrand	12	chr9	120038593	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-10.0895
chr13	23647493	23647515	protein_coding	Hist1h1d	exon	ENSMUSG00000052565	ProperStrand	78	chr1	162965981	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-3.1245
chr17	46814084	46814100	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr14	103513056	103513121	protein_coding	Mycbp2	utr3	ENSMUSG00000033004	ProperStrand	129	1	-7.7015
chr11	96160142	96160159	protein_coding	Hoxb6	intron	ENSMUSG00000000690	ProperStrand	7	chr6	91706077	91706100	protein_coding	Slc6a6	utr3	ENSMUSG00000030096	ProperStrand	206	1	-15.2780
chr7	118218272	118218340	protein_coding	Eif4g2	exon	ENSMUSG00000005610	ProperStrand	134	chr15	98350146	98350182	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	2	-5.5715
chr11	50196161	50196325	protein_coding	Hnrnph1	exon	ENSMUSG00000007850	ProperStrand	49	chr12	106269289	106269379	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-4.5261
chr11	48615524	48616692	protein_coding-noncoding	Gnb2l1	utr5	ENSMUSG00000020372	ProperStrand	21	chr16	23110962	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.9373
chr1	141319671	141319687	protein_coding	Zbtb41	utr5	ENSMUSG00000033964	NonProperStrand	145	chr11	77996564	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-4.3822
chr18	39078246	39078262	protein_coding	Arhgap26	intron	ENSMUSG00000036452	ProperStrand	46	chr16	23110453	23110510	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.9251
chr14	45568498	45568517	lincRNA	Gm16976	intron	ENSMUSG00000085500	NonProperStrand	4	chr11	6428076	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-8.6824
chr2	92440278	92440296	protein_coding	Chst1	utr5	ENSMUSG00000027221	ProperStrand	17	chrX	93136011	93136027	protein_coding	Las1l	exon	ENSMUSG00000057421	ProperStrand	248	1	-13.0296
chr17	28466265	28466365	protein_coding-noncoding	Rpl10a	utr5	ENSMUSG00000037805	ProperStrand	14	chr4	131865940	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.3681
chr16	93873596	93873612	protein_coding	Morc3	exon	ENSMUSG00000039456	ProperStrand	24	chr9	15119287	15119396	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-6.9213
chr10	41644311	41644329	protein_coding	Armc2	exon	ENSMUSG00000071324	ProperStrand	281	chr4	53873606	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	1	-5.9818
chr4	133425200	133425418	protein_coding	Rps6ka1	exon	ENSMUSG00000003644	ProperStrand	68	chr11	68886928	68887018	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-3.9083
chr19	44378662	44378740	protein_coding	Scd2	utr3	ENSMUSG00000025203	ProperStrand	219	chr9	120038611	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.0112
chr15	8301348	8301438	protein_coding	Nipbl	exon	ENSMUSG00000022141	ProperStrand	45	chr11	69483202	69483282	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	11	-19.9879
chr9	108111483	108111537	protein_coding	Dag1	exon	ENSMUSG00000039952	ProperStrand	54	chr5	74489564	74489654	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-3.9754
chr7	30106963	30106994	protein_coding	Sipa1l3	utr3	ENSMUSG00000030583	ProperStrand	559	chr9	15514257	15514276	protein_coding	Slc36a4	exon	ENSMUSG00000043885	ProperStrand	94	1	-7.9491
chr10	80072139	80072203	protein_coding	Scamp4	exon	ENSMUSG00000078441	ProperStrand	54	chr4	131908804	131908896	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.3702
chr9	120039599	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	chr4	41158546	41158608	snoRNA	ENSMUSG00000089308_SNORD121A	.	ENSMUSG00000089308	ProperStrand	209	5	-7.2788
chr3	153575089	153575108	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	chr4	56910503	56910618	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	9	-18.4627
chr4	151433407	151433423	protein_coding	Nol9	utr3	ENSMUSG00000028948	ProperStrand	93	chr5	121655098	121655127	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.9496
chr5	92243792	92243810	pseudogene	Gm15710	.	ENSMUSG00000084111	NonProperStrand	12	chr11	69483212	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-5.4834
chr5	108329654	108330898	protein_coding	Rpl5	utr5	ENSMUSG00000058558	ProperStrand	235	chr19	8800092	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-4.9270
chr11	4820972	4820990	protein_coding	Thoc5	intron	ENSMUSG00000034274	ProperStrand	325	chr11	48614367	48614434	snoRNA	ENSMUSG00000064500_SNORD95	.	ENSMUSG00000064500	ProperStrand	100	1	-8.9040
chr9	61761131	61761154	protein_coding	Rplp1	exon	ENSMUSG00000007892	ProperStrand	116	chr1	162965554	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.1328
chr4	32728232	32728322	protein_coding	Casp8ap2	exon	ENSMUSG00000028282	ProperStrand	7	chr4	131908800	131908880	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.0493
chr2	57090809	57090827	protein_coding	Gpd2	utr5	ENSMUSG00000026827	ProperStrand	93	chr12	88488443	88496423	protein_coding	Pomt2	exon	ENSMUSG00000034126	NonProperStrand	331	1	-9.0126
chr1	4441366	4441384	LTR	RLTR20B2	ERVK	chr1RLTR20B24441343	ProperStrand	1	chr6	71832623	71832685	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-inf
chr6	128380731	128380793	protein_coding	Fkbp4	utr3	ENSMUSG00000030357	ProperStrand	114	chr7	117166761	117166857	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-3.6034
chr4	42996397	43008779	protein_coding	Vcp	exon	ENSMUSG00000028452	ProperStrand	108	chr15	34370545	34370588	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	3	-6.5885
chr4	136877918	136877970	protein_coding	Cdc42	utr3	ENSMUSG00000006699	ProperStrand	38	chr15	79913288	79913339	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-7.4324
chr11	62416575	62418038	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr17	35299507	35299640	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	2	-2.1243
chr4	116827162	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	chr1	172975132	172975189	tRNA	tRNA699-GlyGCC	.	888386	ProperStrand	660	1	-2.5081
chr16	17802969	17802986	protein_coding	Scarf2	exon	ENSMUSG00000012017	NonProperStrand	4	chr12	82317769	82317785	protein_coding	Slc8a3	exon	ENSMUSG00000079055	ProperStrand	126	1	-17.5110
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr7	138735865	138735881	protein_coding	Fgfr2	intron	ENSMUSG00000030849	NonProperStrand	95	1	-7.7976
chr13	9833565	9833664	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr2	166890803	166890858	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	1	-2.2845
chr2	98506574	98506664	Satellite	SYNREP_MM	Satellite	chr2SYNREP_MM98506361	ProperStrand	2	chr2	98502736	98502826	protein_coding	Gm10801	intron	ENSMUSG00000075015	NonProperStrand	4	1	-inf
chr9	95372504	95372559	protein_coding	2610101N10Rik	exon	ENSMUSG00000032407	ProperStrand	56	chr16	23111755	23111778	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.0136
chr17	49835460	49835540	protein_coding	Kif6	intron	ENSMUSG00000023999	NonProperStrand	2	chr17	49879158	49879248	protein_coding	Kif6	intron	ENSMUSG00000023999	ProperStrand	8	1	-19.9311
chr13	107765485	107765502	protein_coding	Kif2a	exon	ENSMUSG00000021693	ProperStrand	32	chrX	160861213	160865882	protein_coding	Piga	exon	ENSMUSG00000031381	ProperStrand	4	1	-19.3591
chr9	96101513	96101613	protein_coding	Tfdp2	intron	ENSMUSG00000032411	ProperStrand	95	chr19	25016725	25016790	snoRNA	ENSMUSG00000064896_SNORA19	.	ENSMUSG00000064896	ProperStrand	88	1	-11.6200
chr3	153574609	153574654	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	chr9	15130919	15130985	snoRNA	ENSMUSG00000077394_snoU2_19	.	ENSMUSG00000077394	ProperStrand	96	2	-13.8644
chr11	51457011	51457030	protein_coding	N4bp3	utr3	ENSMUSG00000001053	ProperStrand	45	chr7	29136554	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.8631
chr9	123763783	123763799	protein_coding	Xcr1	utr3	ENSMUSG00000060509	NonProperStrand	40	chr2	32818803	32818886	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-6.2691
chr2	24815300	24815353	protein_coding	Zmynd19	utr3	ENSMUSG00000026974	ProperStrand	18	chr4	131908356	131908429	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	5	-15.2592
chr8	67744497	67744587	LTR	MTC	MaLR	chr8MTC67744472	NonProperStrand	1	chr8	67744263	67744343	LTR	RMER13B	ERVK	chr8RMER13B67743426	NonProperStrand	1	1	-inf
chr2	93653981	93654016	protein_coding	Ext2	exon	ENSMUSG00000027198	ProperStrand	49	chr1	162966814	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	2	-10.7610
chr9	15119273	15119365	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	chr8	73419657	73419692	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-1.9436
chr5	108334224	108336490	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	chr17	35088967	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	8	-2.1491
chr11	72257284	72257374	protein_coding	Mybbp1a	exon	ENSMUSG00000040463	ProperStrand	279	chr2	22444579	22444628	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	3	-11.2587
chr4	152013323	152013413	LTR	MLT1K	MaLR	chr4MLT1K152013186	ProperStrand	1	chr4	152012947	152013037	LTR	MTD	MaLR	chr4MTD152012912	NonProperStrand	1	1	-inf
chr7	133610985	133611048	protein_coding	Sh2b1	utr3	ENSMUSG00000030733	ProperStrand	17	chr16	23111450	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.3471
chr4	41063031	41063062	protein_coding	Nol6	exon	ENSMUSG00000028430	ProperStrand	98	chr1	162968212	162968254	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	2	-9.5222
chr5	138604758	138604974	protein_coding	Cops6	exon	ENSMUSG00000019494	ProperStrand	12	chr7	52381719	52381799	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	6	-21.5256
chr9	72558322	72560005	protein_coding	Nedd4	exon	ENSMUSG00000032216	ProperStrand	308	chr12	70259692	70260018	protein_coding	Rps29	exon	ENSMUSG00000034892	ProperStrand	124	14	-inf
chr2	130510679	130510769	protein_coding	Slc4a11	exon	ENSMUSG00000074796	ProperStrand	15	chr3	123210933	123210974	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	5	-19.3071
chr4	137095901	137115013	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	chr5	108336363	108336482	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-1.3597
chr11	48613862	48613952	protein_coding	Gnb2l1	utr5	ENSMUSG00000020372	ProperStrand	347	chr1	153759644	153759664	protein_coding	1700025G04Rik	intron	ENSMUSG00000032666	NonProperStrand	35	3	-inf
chr17	28437675	28437730	protein_coding	Ppard	utr3	ENSMUSG00000002250	ProperStrand	25	chr15	5068428	5068479	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-7.8147
chr7	31209305	31209405	protein_coding	Nfkbid	utr5	ENSMUSG00000036931	ProperStrand	1	chr2	69861205	69861222	protein_coding	Ubr3	utr3	ENSMUSG00000044308	ProperStrand	62	1	-inf
chr18	35714263	35714292	lincRNA	Snhg4	intron	ENSMUSG00000090430	ProperStrand	270	chr13	6594434	6594528	protein_coding-noncoding	Pfkp	utr3	ENSMUSG00000021196	ProperStrand	20	2	-18.6113
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr12	112779227	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-1.3583
chr7	104810237	104810317	protein_coding	Rsf1	exon	ENSMUSG00000035623	ProperStrand	48	chr16	23111718	23111808	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.2671
chr6	142454023	142456421	protein_coding	Ldhb	utr5	ENSMUSG00000030246	ProperStrand	224	chr7	63483932	63483954	protein_coding	Herc2	exon	ENSMUSG00000030451	ProperStrand	66	1	-10.4800
chr15	12176893	12176925	protein_coding	Mtmr12	intron	ENSMUSG00000039458	ProperStrand	16	chr11	97642952	97643007	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.9320
chr10	82211882	82211914	protein_coding	Nfyb	utr3	ENSMUSG00000020248	ProperStrand	25	chr2	158182156	158182213	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	4	-19.7467
mmu-miR-6240	2	23	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr17	35293349	35293404	protein_coding	Prrc2a	exon	ENSMUSG00000024393	ProperStrand	315	2	-4.8388
chr15	20083401	20083418	LINE	Lx	L1	chr15Lx20083212	NonProperStrand	14	chr11	97643043	97643133	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	1	-10.8102
chr17	19401737	19401817	LINE	L1Md_F2	L1	chr17L1Md_F219401113	NonProperStrand	1	chr6	59137449	59137539	LINE	L1Md_F2	L1	chr6L1Md_F259136923	NonProperStrand	1	1	-inf
chr19	39144027	39144044	protein_coding	Cyp2c65	exon	ENSMUSG00000067231	ProperStrand	2	chr4	131865866	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-8.7800
chr9	78326652	78328440	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr9	120037980	120038054	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	29	-19.7281
chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-7.5898
chr16	33726534	33726550	protein_coding	Heg1	exon	ENSMUSG00000075254	NonProperStrand	37	chr4	116827130	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	2	-12.7976
chr1	180885279	180885295	protein_coding	Smyd3	utr3	ENSMUSG00000055067	NonProperStrand	190	chr1	162966812	162966845	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-4.0329
chr18	77473331	77473350	protein_coding	St8sia5	intron	ENSMUSG00000025425	NonProperStrand	1	chr1	134888786	134891122	protein_coding	Mdm4	utr3	ENSMUSG00000054387	ProperStrand	95	1	-inf
chr1	167828267	167828284	protein_coding	Pou2f1	intron	ENSMUSG00000026565	NonProperStrand	33	chr1	162967734	162967806	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	1	-11.4542
chr4	43505675	43505737	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr1	63102357	63102385	protein_coding	Ino80d	utr3	ENSMUSG00000040865	ProperStrand	70	2	-4.8709
chr13	56804912	56804928	protein_coding	Smad5	utr5	ENSMUSG00000021540	ProperStrand	47	chr2	26768392	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-6.0819
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr7	52378397	52378453	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	1	-4.1922
chr7	52309977	52309993	protein_coding	Prrg2	exon	ENSMUSG00000007837	NonProperStrand	281	chr3	89219637	89219666	protein_coding	Cks1b	utr3	ENSMUSG00000028044	ProperStrand	10	1	-13.8832
chr11	97413144	97413160	protein_coding	Srcin1	exon	ENSMUSG00000038453	NonProperStrand	21	chr4	128901075	128901167	protein_coding	C77080	exon	ENSMUSG00000050390	ProperStrand	48	1	-15.8761
chr14	8727169	8728647	protein_coding	Flnb	exon	ENSMUSG00000025278	ProperStrand	124	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.1738
chr7	52309977	52309993	protein_coding	Prrg2	exon	ENSMUSG00000007837	NonProperStrand	281	chr14	35490464	35490481	protein_coding	Wapal	exon	ENSMUSG00000041408	ProperStrand	93	1	-9.3392
chr2	171247669	171247688	LTR	MTEa	MaLR	chr2MTEa171247380	NonProperStrand	1	chr1	95319890	95319923	protein_coding	Hdlbp	exon	ENSMUSG00000034088	ProperStrand	97	1	-inf
chr18	74377794	74377850	protein_coding	Cxxc1	exon	ENSMUSG00000024560	ProperStrand	44	chr17	24856662	24856752	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-7.0433
chr16	33434763	33434801	protein_coding	Zfp148	exon	ENSMUSG00000022811	ProperStrand	10	chr2	26494763	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	4	-19.6544
chr2	146140684	146140713	protein_coding	Ralgapa2	exon	ENSMUSG00000037110	ProperStrand	35	chr2	26768724	26768791	protein_coding	Rpl7a	utr3	ENSMUSG00000062647	ProperStrand	234	1	-11.6727
chr10	94848425	94848543	protein_coding	Socs2	utr3	ENSMUSG00000020027	ProperStrand	7	chr1	162967532	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-7.7490
chr3	68834789	68834839	protein_coding	Smc4	intron	ENSMUSG00000034349	ProperStrand	21	chr10	110918647	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-5.4616
chr4	134732881	134732897	protein_coding	Runx3	utr3	ENSMUSG00000070691	ProperStrand	17	chr9	120037991	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-7.2046
chrX	152009278	152009294	protein_coding	Ptchd1	exon	ENSMUSG00000041552	NonProperStrand	294	chr11	62418013	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-2.5972
chr4	139173269	139173285	protein_coding	Iffo2	utr3	ENSMUSG00000041025	ProperStrand	8	chr9	15118352	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-7.4559
chr15	76432596	76432635	protein_coding	Cpsf1	exon	ENSMUSG00000034022	ProperStrand	127	chr17	35087894	35087948	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-3.7721
chr5	137510906	137510996	protein_coding	Ap1s1	utr3	ENSMUSG00000004849	ProperStrand	16	chr11	6520360	6520440	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	1	-10.3938
chr7	31895791	31899711	protein_coding	Hpn	utr5	ENSMUSG00000001249	ProperStrand	126	chr11	113588276	113588348	protein_coding	Cdc42ep4	utr3	ENSMUSG00000041598	ProperStrand	56	1	-11.9627
chr1	133422019	133422047	protein_coding	Srgap2	utr5	ENSMUSG00000026425	ProperStrand	299	chr7	110114018	110114034	protein_coding	Olfr576	exon	ENSMUSG00000073962	NonProperStrand	79	1	-9.5421
chr4	116365583	116366323	protein_coding	Prdx1	exon	ENSMUSG00000028691	ProperStrand	41	chr1	164635220	164635318	protein_coding	Prrc2c	exon	ENSMUSG00000040225	ProperStrand	413	2	-16.1346
chr3	108228259	108228275	protein_coding	Sars	utr3	ENSMUSG00000068739	NonProperStrand	200	chr7	116663633	116663711	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-0.7618
chr15	36528777	36529015	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr7	108971290	108971306	protein_coding	Inppl1	utr3	ENSMUSG00000032737	ProperStrand	272	2	-8.0958
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr18	63238391	63238408	protein_coding	Fam38b	exon	ENSMUSG00000041482	NonProperStrand	50	1	-7.3908
chr8	53422371	53422461	snRNA	ENSMUSG00000064682_U2	.	ENSMUSG00000064682	ProperStrand	55	chr9	15118247	15118318	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.6272
chr13	53073980	53073997	protein_coding	Nfil3	intron	ENSMUSG00000056749	NonProperStrand	66	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	2	-9.2371
chr11	69482403	69482493	snoRNA	ENSMUSG00000089542_snoU6-77	.	ENSMUSG00000089542	ProperStrand	138	chr5	130300435	130300515	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.2171
chr9	109742139	109742206	protein_coding	Nme6	exon	ENSMUSG00000032478	ProperStrand	1	chr4	131908689	131908751	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-inf
chr13	63612936	63612952	protein_coding	Ptch1	exon	ENSMUSG00000021466	NonProperStrand	118	chr5	121655099	121655129	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.5345
chr15	96529849	96529870	protein_coding	Slc38a2	utr5	ENSMUSG00000022462	ProperStrand	133	chr14	76247789	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-4.7419
chr13	9761769	9761788	protein_coding	Zmynd11	intron	ENSMUSG00000021156	ProperStrand	5	chr11	55296195	55296274	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-11.3158
chr16	23110533	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	chr4	131866643	131866676	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	5	-1.5589
chr7	150713196	150713286	protein_coding	Nap1l4	intron	ENSMUSG00000059119	ProperStrand	31	chr4	131865856	131865936	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-5.0186
chr8	131244243	131244333	protein_coding	Itgb1	exon	ENSMUSG00000025809	ProperStrand	35	chr7	29136553	29136633	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-5.6959
chr2	91515024	91515063	protein_coding	Atg13	utr3	ENSMUSG00000027244	ProperStrand	22	chr5	74489572	74489662	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	6	-20.5343
chr8	91343853	91343872	DNA	Charlie10	MER1_type	chr8Charlie1091343828	ProperStrand	23	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-10.8651
chr10	20080841	20080858	protein_coding	Fam54a	utr3	ENSMUSG00000019992	ProperStrand	232	chr5	74489580	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	5	-8.0350
chr13	96247406	96248477	protein_coding	S100z	exon	ENSMUSG00000021679	NonProperStrand	43	chr2	166890559	166890580	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-8.2243
chr16	30600894	30600974	protein_coding	Fam43a	exon	ENSMUSG00000046546	ProperStrand	8	chr9	15119676	15119766	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	5	-19.5585
chr4	26252191	26252208	protein_coding	Manea	utr3	ENSMUSG00000040520	NonProperStrand	1	chr16	23111693	23111734	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-inf
chr10	12902322	12902670	protein_coding	Ltv1	exon	ENSMUSG00000019814	ProperStrand	76	chr11	69481384	69481462	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-2.7793
chr2	152105822	152105862	protein_coding	Csnk2a1	utr3	ENSMUSG00000074698	ProperStrand	91	chrX	34622906	34622957	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-2.4403
chr9	114373417	114373472	protein_coding	Glb1	utr3	ENSMUSG00000045594	ProperStrand	67	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	2	-11.2866
chr5	74489543	74489563	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr5	65952377	65952395	protein_coding	Ube2k	intron	ENSMUSG00000029203	ProperStrand	289	1	-2.6841
chr7	151621837	151621895	protein_coding	Cttn	utr3	ENSMUSG00000031078	ProperStrand	33	chr5	130300473	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.5813
chr17	53623236	53623252	protein_coding	Rab5a	utr5	ENSMUSG00000017831	ProperStrand	44	chr2	130101988	130102056	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-5.9652
chr18	36700414	36700431	protein_coding	Slc4a9	exon	ENSMUSG00000024485	ProperStrand	13	chr5	106886739	106886756	protein_coding	Barhl2	exon	ENSMUSG00000034384	ProperStrand	4	1	-20.8300
chr9	95525001	95525037	antisense	Gm16126	.	ENSMUSG00000086585	NonProperStrand	229	chr19	8799581	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-4.1668
chr10	93683472	93683510	protein_coding	Ndufa12	exon	ENSMUSG00000020022	ProperStrand	1	chr13	54723202	54723218	protein_coding	Faf2	exon	ENSMUSG00000025873	ProperStrand	90	1	-inf
chr12	17552949	17553049	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr12	92811868	92811967	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	2	-2.0409
chr4	147941963	147942057	protein_coding	Exosc10	intron	ENSMUSG00000017264	ProperStrand	20	chr17	24343586	24343602	protein_coding	Ntn3	exon	ENSMUSG00000079662	ProperStrand	237	1	-12.7859
chr11	97032946	97032969	protein_coding	Kpnb1	exon	ENSMUSG00000001440	ProperStrand	197	chr2	25417434	25417562	protein_coding	Edf1	utr3	ENSMUSG00000015092	ProperStrand	22	6	-20.8469
chr2	158205291	158205381	snoRNA	ENSMUSG00000064585_SNORA71	.	ENSMUSG00000064585	ProperStrand	418	chr2	32818881	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-1.9413
chr4	145568733	145764222	protein_coding	Gm13248	intron	ENSMUSG00000063245	ProperStrand	1	chr9	15118338	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-inf
chr18	10052132	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	1	-4.4122
chr5	152198645	152198661	lincRNA	1700028E10Rik	exon	ENSMUSG00000087548	ProperStrand	53	chr8	122140316	122140332	protein_coding	Adad2	exon	ENSMUSG00000024266	NonProperStrand	1	1	-inf
chr7	107995760	107995776	protein_coding	Relt	exon	ENSMUSG00000008318	ProperStrand	1	chr9	20532401	20532420	protein_coding	Olfm2	intron	ENSMUSG00000032172	NonProperStrand	4	1	-inf
chr11	97073633	97074427	protein_coding	Npepps	exon	ENSMUSG00000001441	ProperStrand	30	chr9	120038493	120038573	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.3284
chr8	77635906	77635923	protein_coding	Mcm5	intron	ENSMUSG00000005410	ProperStrand	199	chr8	73419657	73419776	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-1.2017
chr11	55283385	55283429	protein_coding	G3bp1	intron	ENSMUSG00000018583	ProperStrand	106	chr1	181027187	181027205	protein_coding	Smyd3	intron	ENSMUSG00000055067	ProperStrand	231	1	-9.4683
chr3	36623184	36623200	LTR	MLT1H	MaLR	chr3MLT1H36622969	ProperStrand	15	chr4	131865855	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-7.1614
chr15	71624748	71624796	snoRNA	ENSMUSG00000088895_SNORA81	.	ENSMUSG00000088895	ProperStrand	348	chr3	123210853	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	5	-1.8877
chr8	114518781	114525704	protein_coding	Kars	exon	ENSMUSG00000031948	ProperStrand	89	chr11	97642952	97643074	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	6	-11.6804
chr12	114290175	114290191	protein_coding	Pacs2	intron	ENSMUSG00000021143	NonProperStrand	302	chr7	137662965	137663002	protein_coding	Ate1	utr5	ENSMUSG00000030850	ProperStrand	14	1	-13.0393
chr4	53873613	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	chr2	158185584	158185652	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-2.4813
chr14	108986504	108986521	LTR	MTE-int	MaLR	chr14MTE-int108986408	ProperStrand	32	chr8	123157805	123157825	protein_coding	1190005I06Rik	intron	ENSMUSG00000043687	ProperStrand	3	1	-inf
chr19	45538126	45538183	protein_coding	Btrc	intron	ENSMUSG00000025217	ProperStrand	14	chr10	110918665	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-10.2665
chr9	103387071	103387087	antisense	Gm16252	.	ENSMUSG00000085168	ProperStrand	1	chr17	24857719	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-inf
chr1	82663616	82663635	protein_coding	Col4a3	intron	ENSMUSG00000079465	ProperStrand	99	chr16	23111734	23111814	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	5	-6.9238
chr19	59335933	59337435	protein_coding	Slc18a2	exon	ENSMUSG00000025094	ProperStrand	11	chr16	23111375	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.1830
chr16	91630945	91631260	protein_coding	Gart	exon	ENSMUSG00000022962	ProperStrand	200	chr11	69483136	69483205	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-2.4975
chr13	119500325	119500342	antisense	Gm16263	.	ENSMUSG00000086709	ProperStrand	20	chr15	79908929	79908989	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-7.6621
chr2	121949510	121949526	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	chr9	15069885	15069901	protein_coding	Med17	exon	ENSMUSG00000031935	ProperStrand	135	2	-13.7753
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	51790398	51790415	protein_coding	Pold1	exon	ENSMUSG00000038644	NonProperStrand	10	1	-8.0457
chr17	12585979	12585995	protein_coding	Plg	exon	ENSMUSG00000059481	ProperStrand	86	chr4	131865381	131865496	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-3.3354
chr2	22444733	22445125	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	6	-1.5150
chr3	130429873	130431731	protein_coding	Rpl34	exon	ENSMUSG00000062006	ProperStrand	51	chr17	13112533	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	3	-11.5893
chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr11	66204284	66204301	protein_coding	Shisa6	intron	ENSMUSG00000053930	ProperStrand	23	2	-13.3779
chr17	45656494	45656686	protein_coding	Aars2	exon	ENSMUSG00000023938	ProperStrand	14	chr5	74489622	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-6.6284
chr14	56389353	56390228	protein_coding	Adcy4	exon	ENSMUSG00000022220	ProperStrand	29	chr5	121655099	121655129	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.1397
chr5	143874599	143874615	protein_coding	Rnf216	utr5	ENSMUSG00000045078	NonProperStrand	29	chr2	31924012	31924028	protein_coding	Fam78a	utr3	ENSMUSG00000050592	NonProperStrand	340	1	-11.3069
chr5	144137500	144137523	protein_coding	Grid2ip	intron	ENSMUSG00000010825	NonProperStrand	5	chr4	115972351	115972386	protein_coding	Pik3r3	exon	ENSMUSG00000028698	ProperStrand	3	1	-inf
chr6	23789054	23789071	protein_coding	Cadps2	exon	ENSMUSG00000017978	ProperStrand	9	chr3	136333602	136333702	protein_coding	Ppp3ca	utr5	ENSMUSG00000028161	ProperStrand	45	1	-17.6641
chr11	62416575	62416600	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr2	130103751	130103808	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	5	-16.9421
chr9	51881328	51881413	protein_coding	Rdx	intron	ENSMUSG00000032050	ProperStrand	60	chr3	82816757	82816773	protein_coding	Fgg	exon	ENSMUSG00000033860	NonProperStrand	321	1	-9.9526
chr17	4082884	4082974	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	mmu-miR-1949	1	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	1	-4.8634
chr8	77742558	77742574	protein_coding	Rasd2	exon	ENSMUSG00000034472	NonProperStrand	237	chr14	76247754	76247783	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-1.7676
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr8	46855240	46855906	protein_coding	Sorbs2	exon	ENSMUSG00000031626	ProperStrand	50	2	-14.2125
chr16	20540487	20541118	protein_coding	Ap2m1	exon	ENSMUSG00000022841	ProperStrand	23	chr19	8799829	8799849	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	4	-19.5467
chr4	148211927	148211945	protein_coding	Casz1	intron	ENSMUSG00000028977	ProperStrand	27	chr16	23111447	23111497	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.5132
chr16	8716617	8716664	protein_coding	Usp7	exon	ENSMUSG00000022710	ProperStrand	118	chr2	26493366	26493420	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-4.4472
chr9	20693988	20694078	protein_coding-noncoding	Ppan	utr5	ENSMUSG00000004100	ProperStrand	1	chr16	16882664	16882744	protein_coding	Top3b	exon	ENSMUSG00000022779	ProperStrand	36	1	-inf
chr15	76734976	76736380	protein_coding	Rpl8	exon	ENSMUSG00000003970	ProperStrand	191	chr7	118219573	118219663	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-3.7800
chr5	145509891	145509908	protein_coding	Tmem130	intron	ENSMUSG00000043388	ProperStrand	26	chr19	8963036	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.7706
chr2	146125208	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	chr12	55797770	55797862	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	5	-21.0068
chr15	89199852	89200112	protein_coding	Ncaph2	exon	ENSMUSG00000008690	ProperStrand	65	chr16	23110530	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.3262
chr9	64024936	64024998	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	chr2	158182202	158182291	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-1.3639
chr4	140369531	140369547	lincRNA	Gm13032	exon	ENSMUSG00000085918	ProperStrand	2	chr16	17516134	17517619	protein_coding	Lztr1	exon	ENSMUSG00000022761	ProperStrand	5	1	-21.6030
chr16	57391761	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-4.9644
chr6	6470249	6470329	LINE	L1Md_F2	L1	chr6L1Md_F26469757	NonProperStrand	1	chr7	5361146	5361236	protein_coding	Vmn1r58	utr3	ENSMUSG00000078808	NonProperStrand	4	1	-inf
chr17	95160909	95218242	protein_coding	2610044O15Rik	exon	ENSMUSG00000066057	NonProperStrand	70	chr2	103880863	103880964	snoRNA	ENSMUSG00000087739_SCARNA21	.	ENSMUSG00000087739	ProperStrand	50	1	-13.3717
chr18	9877636	9877726	protein_coding	Colec12	utr3	ENSMUSG00000036103	NonProperStrand	10	chr3	31104865	31104955	protein_coding	Slc7a14	utr3	ENSMUSG00000069072	NonProperStrand	7	1	-inf
chr17	51059907	51059923	protein_coding	Tbc1d5	exon	ENSMUSG00000023923	NonProperStrand	51	chr19	8963086	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.5507
chr4	149619440	149620718	protein_coding	Eno1	exon	ENSMUSG00000063524	ProperStrand	432	chr16	18240811	18240890	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	1	-5.2241
chr9	21602970	21602986	protein_coding	Kank2	utr5	ENSMUSG00000032194	ProperStrand	196	chr14	57312837	57312965	protein_coding	Mphosph8	intron	ENSMUSG00000079184	NonProperStrand	27	1	-12.5551
chr9	106799028	106799127	protein_coding	Dock3	intron	ENSMUSG00000039716	ProperStrand	24	chr7	52381719	52381736	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-9.4194
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr7	29136525	29136626	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	9	-2.2834
chr1	30861063	30861108	protein_coding	Phf3	exon	ENSMUSG00000048874	ProperStrand	102	chr11	97642999	97643090	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	8	-15.6037
chrX	7460444	7460508	protein_coding	Pim2	utr3	ENSMUSG00000031155	ProperStrand	5	chr17	36000485	36000501	protein_coding	Nrm	exon	ENSMUSG00000059791	ProperStrand	253	1	-15.5639
chr19	37495682	37495769	protein_coding	Kif11	utr3	ENSMUSG00000012443	ProperStrand	29	chr16	33579383	33579473	protein_coding	Slc12a8	intron	ENSMUSG00000035506	ProperStrand	52	1	-15.0730
chr7	30231465	30231592	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-2.9668
chr6	136771462	136772891	protein_coding	Wbp11	exon	ENSMUSG00000030216	ProperStrand	87	chr10	61731979	61732059	protein_coding	Hk1	utr3	ENSMUSG00000037012	ProperStrand	84	1	-11.8908
chr13	64863287	64863304	protein_coding	Cntnap3	exon	ENSMUSG00000033063	ProperStrand	87	chr8	73419657	73419774	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.4781
chr11	80415108	80415125	protein_coding	Myo1d	exon	ENSMUSG00000035441	ProperStrand	144	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-3.2730
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr9	73981603	73981621	protein_coding	Wdr72	intron	ENSMUSG00000044976	NonProperStrand	12	1	-11.0688
chr7	134336331	134336391	protein_coding	Cd2bp2	utr3	ENSMUSG00000042502	ProperStrand	73	chr5	130300528	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.1796
chr13	107697795	107697895	protein_coding	Ipo11	intron	ENSMUSG00000042590	ProperStrand	120	chr1	162965536	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.0777
chr14	122042376	122051030	protein_coding	Dock9	exon	ENSMUSG00000025558	ProperStrand	38	chr4	131865868	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-6.6873
chr16	38417225	38417244	protein_coding	Pla1a	exon	ENSMUSG00000002847	ProperStrand	32	chr5	108334210	108334322	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	4	-18.1331
chr10	128360502	128360552	protein_coding	Bloc1s1	utr5	ENSMUSG00000090247	ProperStrand	28	chr3	123210854	123210877	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.3984
chr7	29404721	29404738	protein_coding	C330005M16Rik	intron	ENSMUSG00000037469	ProperStrand	23	chr5	108334208	108334264	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-6.7107
chr14	25313776	25313841	protein_coding	Rps24	intron	ENSMUSG00000025290	ProperStrand	110	chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	1	-7.6938
chr7	80501455	80501472	lincRNA	A730056A06Rik	intron	ENSMUSG00000092033	ProperStrand	12	chr2	155949613	155949641	protein_coding	Nfs1	utr3	ENSMUSG00000027618	ProperStrand	5	1	-19.3297
chr3	105762453	105762533	protein_coding	Wdr77	utr5	ENSMUSG00000000561	ProperStrand	15	chr17	39985196	39985286	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-8.7194
chr12	89697491	89697511	protein_coding	Adck1	exon	ENSMUSG00000021044	ProperStrand	16	chr1	136438216	136438306	protein_coding	4931440L10Rik	exon	ENSMUSG00000046367	ProperStrand	13	6	-20.1423
chr8	74743884	74745829	protein_coding	Fam32a	exon	ENSMUSG00000003039	ProperStrand	11	chr7	29136587	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.5623
chr15	58913103	58913195	protein_coding	Mtss1	utr5	ENSMUSG00000022353	ProperStrand	68	chr16	23110879	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-2.8062
chr4	43505787	43505867	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr4	117317839	117317929	protein_coding	Eri3	intron	ENSMUSG00000033423	ProperStrand	246	1	-0.8910
chr17	21236193	21236283	LTR	MT2B	ERVL	chr17MT2B21236174	NonProperStrand	1	chr17	21236444	21236534	Simple_repeat	(TG)n	Simple_repeat	chr17(TG)n21236392	ProperStrand	1	1	-inf
chr5	136259186	136259256	protein_coding	Mdh2	exon	ENSMUSG00000019179	ProperStrand	50	chr9	15118323	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	5	-15.9003
chr3	40609601	40609666	protein_coding	Plk4	exon	ENSMUSG00000025758	ProperStrand	15	chr18	35716685	35716775	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.7126
chr3	145593539	145593639	protein_coding	Bcl10	exon	ENSMUSG00000028191	ProperStrand	14	chr9	15119731	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-12.8081
chr8	98280091	98331306	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	chr10	23505152	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	13	-6.2782
chr4	106840672	106840690	protein_coding	2210012G02Rik	intron	ENSMUSG00000028619	NonProperStrand	2	chr3	101408396	101408448	protein_coding	Atp1a1	utr5	ENSMUSG00000033161	ProperStrand	316	1	-17.5326
chr2	126952914	126953251	protein_coding	Ncaph	exon	ENSMUSG00000034906	ProperStrand	43	chr4	131865931	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-4.1183
chr17	45705005	45707653	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr3	68889026	68889244	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	28	-17.9506
chr16	75761550	75765200	protein_coding	Hspa13	exon	ENSMUSG00000032932	NonProperStrand	57	chr5	74489593	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	2	-6.5348
chr9	15119967	15120036	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	chr3	123210854	123210985	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	19	-3.2929
chr11	45723144	45723160	protein_coding	Clint1	utr3	ENSMUSG00000006169	NonProperStrand	273	chr1	162967506	162967566	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-1.0375
chrX	20256882	20257962	protein_coding	Uba1	exon	ENSMUSG00000001924	ProperStrand	156	chr8	129468743	129468833	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-2.6646
chr7	133939174	133939265	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	chr6	97112808	97112879	snoRNA	ENSMUSG00000065728_SNORA36	.	ENSMUSG00000065728	ProperStrand	158	2	-10.3754
chr14	32479927	32479943	protein_coding	Btd	exon	ENSMUSG00000021900	NonProperStrand	74	chr16	23111447	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.9842
chr11	120830462	120832886	protein_coding	Csnk1d	exon	ENSMUSG00000025162	ProperStrand	37	chr10	23505187	23505277	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.9550
chr2	26493401	26493522	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr7	107648003	107648037	protein_coding	Ucp2	utr3	ENSMUSG00000033685	ProperStrand	54	4	-18.6865
chr1	92698923	92698940	protein_coding	Col6a3	exon	ENSMUSG00000048126	NonProperStrand	44	chr11	77995212	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-6.7975
chr8	107829063	107829083	protein_coding	E2f4	utr3	ENSMUSG00000014859	ProperStrand	32	chr16	22572859	22572876	protein_coding	Dgkg	intron	ENSMUSG00000022861	NonProperStrand	39	1	-15.4276
chr7	106997488	106997544	protein_coding	Spcs2	exon	ENSMUSG00000035227	ProperStrand	17	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.6910
chr15	100416584	100416600	protein_coding	Pou6f1	intron	ENSMUSG00000009739	ProperStrand	44	chr1	89673514	89673599	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-3.8362
chr2	25915656	25915672	protein_coding	Nacc2	exon	ENSMUSG00000026932	ProperStrand	98	chr17	35088969	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-4.9125
chr13	94162643	94162733	protein_coding	Homer1	intron	ENSMUSG00000007617	ProperStrand	4	chr3	32750902	32750982	protein_coding	Usp13	intron	ENSMUSG00000056900	NonProperStrand	2	1	-inf
chr10	127752267	127752586	protein_coding	Pan2	exon	ENSMUSG00000005682	ProperStrand	53	chr18	35716777	35716867	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-4.2216
chr10	6979771	6979788	protein_coding	Ppp1r14c	exon	ENSMUSG00000040653	ProperStrand	5	chr9	15118324	15118369	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-8.4764
chr12	73805025	73805047	LINE	L1ME3B	L1	chr12L1ME3B73805010	ProperStrand	9	chr11	69483190	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	6	-19.8501
chr8	125103046	126620129	protein_coding	Gm20388	intron	ENSMUSG00000092329	ProperStrand	295	chr16	23110454	23110507	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-0.8494
chr10	57236733	57236766	protein_coding	Serinc1	utr3	ENSMUSG00000019877	ProperStrand	22	chr13	23830717	23830764	protein_coding	Hist1h1c	exon	ENSMUSG00000036181	ProperStrand	99	1	-14.3467
chr3	133149716	133149779	protein_coding	Tet2	exon	ENSMUSG00000040943	ProperStrand	192	chr14	76247722	76247822	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-2.1011
chr11	48616649	48616706	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	chr17	35088970	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-2.2065
chr5	138620749	138620775	protein_coding	Taf6	exon	ENSMUSG00000036980	NonProperStrand	2	chr10	23505152	23505195	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-8.0476
chr4	45529398	45529416	protein_coding	Shb	intron	ENSMUSG00000044813	ProperStrand	32	chr11	62418047	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-6.8011
chr11	35853330	35853348	protein_coding	Odz2	exon	ENSMUSG00000049336	NonProperStrand	43	chr16	23111778	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.4531
chr12	103732009	103733969	protein_coding	Golga5	exon	ENSMUSG00000021192	ProperStrand	9	chr19	8963024	8963083	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	5	-22.1957
chr4	21606097	21606114	protein_coding	Prdm13	exon	ENSMUSG00000040478	ProperStrand	51	chr19	8800355	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-6.4736
chr6	97884602	97884621	protein_coding	Mitf	intron	ENSMUSG00000035158	ProperStrand	6	chr14	76247733	76247833	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-8.8306
chrX	102545653	102545675	lincRNA	5330434G04Rik	exon	ENSMUSG00000087620	ProperStrand	29	chr15	76443930	76444032	protein_coding	Slc39a4	exon	ENSMUSG00000063354	ProperStrand	35	1	-15.9086
chr4	140857180	140857219	protein_coding	Epha2	utr5	ENSMUSG00000006445	ProperStrand	148	chr8	124552133	124552149	protein_coding	Banp	utr3	ENSMUSG00000025316	NonProperStrand	34	1	-12.6472
chr8	13014869	13014885	protein_coding	Mcf2l	exon	ENSMUSG00000031442	NonProperStrand	35	chr11	60370927	60370943	protein_coding	Alkbh5	utr3	ENSMUSG00000042650	ProperStrand	203	1	-11.9566
chr11	69481335	69481464	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	NonProperStrand	24	chr8	73419703	73419739	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	NonProperStrand	53	2	-20.5523
chr17	66468411	66468427	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	chrX	91434154	91434230	protein_coding	Eif2s3x	utr3	ENSMUSG00000035150	ProperStrand	55	4	-19.6288
chr10	87935690	87935706	protein_coding	Sycp3	utr3	ENSMUSG00000020059	ProperStrand	27	chr1	162965530	162965588	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.7840
chr17	45802450	45802466	antisense	Gm16172	.	ENSMUSG00000086472	ProperStrand	17	chr18	73693171	73693189	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-8.0460
chr3	128995080	128995097	protein_coding	Enpep	intron	ENSMUSG00000028024	NonProperStrand	20	chr4	131908299	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.2521
chr8	72857987	72863055	protein_coding	Upf1	exon	ENSMUSG00000058301	ProperStrand	90	chr19	8800387	8800477	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-4.8713
chr17	24857280	24858598	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr3	123210854	123210933	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	9	-5.1423
chr7	13511117	13511153	protein_coding	Rps5	exon	ENSMUSG00000012848	ProperStrand	108	chr7	148634776	148634836	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	4	-10.0978
chr17	88374694	88374724	protein_coding	Msh6	exon	ENSMUSG00000005370	ProperStrand	150	chr15	37313435	37313452	protein_coding	Ncald	intron	ENSMUSG00000051359	ProperStrand	28	1	-13.0177
chr5	116919287	116919305	protein_coding	Srrm4	intron	ENSMUSG00000063919	NonProperStrand	9	chr12	60141443	60141507	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	2	-16.9924
chr9	14120856	14120894	protein_coding	Sesn3	intron	ENSMUSG00000032009	ProperStrand	8	chr16	23111377	23111467	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-11.9776
chr11	59025282	59025347	protein_coding	Arf1	utr3	ENSMUSG00000048076	ProperStrand	52	chr6	71832550	71832573	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	3	-13.6152
chr4	131909043	131909079	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr11	83107806	83107902	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	4	-10.2317
chr13	68759738	68764669	protein_coding	Adcy2	exon	ENSMUSG00000021536	ProperStrand	237	chr14	66481995	66482021	protein_coding	Ccdc25	intron	ENSMUSG00000022035	ProperStrand	15	1	-13.3797
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr2	91996092	91996109	protein_coding	Phf21a	intron	ENSMUSG00000058318	NonProperStrand	14	1	-8.8326
chr5	29317812	29317829	LINE	Lx7	L1	chr5Lx729317715	ProperStrand	19	chr1	91358413	91358430	protein_coding	Agap1	intron	ENSMUSG00000055013	ProperStrand	229	1	-12.9632
chr6	70805514	70805570	snoRNA	ENSMUSG00000065750_SNORA5	.	ENSMUSG00000065750	ProperStrand	165	chr18	33954905	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	3	-4.9877
chr7	91031861	91031879	protein_coding	Mesdc1	utr5	ENSMUSG00000070462	ProperStrand	19	chr9	15118246	15118336	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	4	-17.7291
chrX	83547356	83547372	protein_coding	Mageb4	intron	ENSMUSG00000035427	NonProperStrand	191	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-3.6520
chr4	108686126	108686237	protein_coding	Nrd1	exon	ENSMUSG00000053510	ProperStrand	76	chr1	162965571	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.8527
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr3	154150501	154150517	LINE	L1_Rod	L1	chr3L1_Rod154150467	NonProperStrand	7	1	-8.8025
chr17	28033014	28033030	protein_coding	Uhrf1bp1	utr3	ENSMUSG00000039512	ProperStrand	79	chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-7.1916
chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	2	-4.2883
chr2	109852521	109852621	protein_coding	Lgr4	exon	ENSMUSG00000050199	ProperStrand	27	chr18	35716811	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.5820
chr9	9521636	9521726	LINE	L1Md_F2	L1	chr9L1Md_F29521604	ProperStrand	1	chr9	9521458	9521548	LTR	MuRRS4-int	ERV1	chr9MuRRS4-int9520673	ProperStrand	1	1	-inf
chr8	73286795	73286875	protein_coding	Ifi30	utr3	ENSMUSG00000031838	ProperStrand	40	chr19	8800353	8800443	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	4	-13.8329
chr11	120145448	120145584	protein_coding	Bahcc1	exon	ENSMUSG00000039741	ProperStrand	118	chr18	35714205	35714290	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-2.2556
chr19	5104987	5105087	protein_coding	Rab1b	intron	ENSMUSG00000024870	ProperStrand	133	chr1	162965545	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.9129
chr3	58969879	58969959	protein_coding	Med12l	intron	ENSMUSG00000056476	ProperStrand	18	chr3	58869744	58869834	protein_coding	Gm10071	intron	ENSMUSG00000059776	NonProperStrand	9	1	-18.8602
chr4	56910496	56910611	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	chrX	143918924	143918964	snoRNA	ENSMUSG00000084421_SNORA35	.	ENSMUSG00000084421	ProperStrand	293	2	-5.3214
chr10	79203459	79203582	protein_coding	Polrmt	exon	ENSMUSG00000020329	ProperStrand	11	chr11	120682334	120682383	protein_coding	Fasn	exon	ENSMUSG00000025153	ProperStrand	298	2	-19.2441
chrX	49966861	49966916	protein_coding	Gpc3	exon	ENSMUSG00000055653	ProperStrand	43	chr12	110918194	110918221	snoRNA	ENSMUSG00000065749_AF357428	.	ENSMUSG00000065749	ProperStrand	218	2	-18.0494
chr8	72696305	72696321	protein_coding	Tmem161a	utr5	ENSMUSG00000002342	NonProperStrand	4	chr7	29136525	29136586	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-7.7378
chr4	135521534	135521550	protein_coding	Gale	exon	ENSMUSG00000028671	ProperStrand	61	chr19	37389408	37389443	protein_coding	Ide	exon	ENSMUSG00000056999	ProperStrand	19	1	-15.5987
chr2	90235297	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr3	21053723	21053740	LTR	RMER17A2	ERVK	chr3RMER17A221052987	NonProperStrand	4	1	-10.0500
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr8	73419657	73419735	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-0.8582
chr12	70327365	70327381	protein_coding	Pole2	exon	ENSMUSG00000020974	ProperStrand	6	chr5	54389951	54389967	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	1	-15.5065
chr6	141541863	141541940	LINE	L1_Mur2	L1	chr6L1_Mur2141540750	ProperStrand	1	chr15	79908930	79908957	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-inf
chr15	31531360	31531402	protein_coding	Cct5	exon	ENSMUSG00000022234	ProperStrand	116	chr1	162965573	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-3.8233
chr6	143429777	143429793	LINE	L1MA4	L1	chr6L1MA4143429728	ProperStrand	39	chr16	23110952	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.5380
chr2	26203131	26203147	protein_coding	Gpsm1	utr3	ENSMUSG00000026930	ProperStrand	93	chr7	30074412	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-9.5486
chr11	30043124	30043142	protein_coding	Spnb2	exon	ENSMUSG00000020315	ProperStrand	103	chrX	71517864	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	2	-8.9696
chr19	6044339	6044374	SINE	RSINE1	B4	chr19RSINE16044317	ProperStrand	1	chrX	34622958	34623009	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-inf
chrX	71475298	71475415	protein_coding	Flna	exon	ENSMUSG00000031328	ProperStrand	134	chr2	26493360	26493473	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-2.3149
chr11	115451723	115451739	protein_coding	Gga3	exon	ENSMUSG00000020740	NonProperStrand	50	chr15	79908956	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-5.8301
chr10	87820027	87820043	protein_coding	Dram1	intron	ENSMUSG00000020057	ProperStrand	24	chr7	51505224	51505308	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	1	-10.0001
chr2	95851579	95851669	LINE	L1Md_F2	L1	chr2L1Md_F295850037	NonProperStrand	1	chr2	148921854	148921944	LINE	L1VL4	L1	chr2L1VL4148920743	NonProperStrand	1	1	-inf
chr7	109149271	109149287	protein_coding	Numa1	exon	ENSMUSG00000066306	NonProperStrand	171	chr6	100179664	100179686	protein_coding	Rybp	utr3	ENSMUSG00000072872	ProperStrand	51	1	-11.5397
chr16	42539763	42539780	LINE	L2a	L2	chr16L2a42539730	NonProperStrand	11	chr1	63225274	63225322	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	1	-12.2985
chr7	146684406	146684425	protein_coding	Inpp5a	intron	ENSMUSG00000025477	ProperStrand	166	chr15	79913292	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-1.8367
chr12	106269352	106269445	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	chr14	51709218	51709266	tRNA	tRNA191-TyrGTA	.	510940	ProperStrand	21	1	-6.1898
chr11	59262725	59262742	protein_coding	Snap47	intron	ENSMUSG00000009894	NonProperStrand	2	chr4	131908766	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-8.0336
chr7	138009546	138009562	protein_coding	Plekha1	intron	ENSMUSG00000040268	ProperStrand	15	chr15	34370545	34370615	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-10.2093
chr8	86465658	86465696	protein_coding	Lphn1	utr3	ENSMUSG00000013033	ProperStrand	221	chr11	116299984	116300085	protein_coding	Fam100b	utr3	ENSMUSG00000050628	ProperStrand	97	1	-9.7343
chr4	77246718	77246739	protein_coding	Ptprd	intron	ENSMUSG00000028399	NonProperStrand	29	chr2	26494702	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.4659
chr7	19590197	19590213	protein_coding	Irf2bp1	exon	ENSMUSG00000044030	NonProperStrand	81	chr9	44314419	44314436	protein_coding	Bcl9l	exon	ENSMUSG00000063382	ProperStrand	12	1	-16.0118
chr18	60872796	60872886	protein_coding	Ndst1	exon	ENSMUSG00000054008	ProperStrand	38	chr18	35714145	35714225	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	10	-inf
chr19	47694637	47694737	protein_coding	Slk	exon	ENSMUSG00000025060	ProperStrand	27	chr11	51551279	51551336	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	1	-9.3061
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	94327810	94327826	protein_coding	Cacna1g	intron	ENSMUSG00000020866	ProperStrand	35	1	-5.5085
chr7	140179522	140179605	protein_coding	Ctbp2	utr3	ENSMUSG00000030970	ProperStrand	89	chr11	97642952	97642983	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.8258
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr15	79908928	79909009	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	3	-2.7120
chr17	29827309	29827379	protein_coding	Ftsjd2	exon	ENSMUSG00000024019	ProperStrand	31	chr16	23111390	23111480	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-8.5508
chr7	133640793	133641021	protein_coding	Atxn2l	exon	ENSMUSG00000032637	ProperStrand	219	chr19	8799052	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-3.3686
chr8	13876081	13877609	protein_coding	Zfp828	intron	ENSMUSG00000047710	ProperStrand	32	chr8	13876122	13876231	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	2	-13.3988
chr4	15193590	15193690	protein_coding	Tmem64	exon	ENSMUSG00000043252	ProperStrand	32	chr7	116664860	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.6812
chr8	37633201	37633262	protein_coding	Dlc1	utr3	ENSMUSG00000031523	ProperStrand	89	chr15	98350177	98350267	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-4.0103
chr2	26221156	26221245	protein_coding	Snapc4	exon	ENSMUSG00000036281	ProperStrand	19	chr11	68874381	68874398	protein_coding	2310047M10Rik	utr3	ENSMUSG00000045176	ProperStrand	7	1	-inf
chr18	73693109	73693187	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr4	131866155	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	14	-1.3271
chr9	108229983	108233273	protein_coding	Rhoa	exon	ENSMUSG00000007815	ProperStrand	45	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-2.1851
chr9	15119286	15119390	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	chr11	106362554	106362587	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	2	-0.9627
chr11	29445999	29446368	protein_coding	Rps27a	exon	ENSMUSG00000020460	ProperStrand	47	chr8	113366285	113366322	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	1	-9.6705
chr19	40385022	40385112	protein_coding	Sorbs1	intron	ENSMUSG00000025006	ProperStrand	25	chr16	23110909	23110989	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	7	-12.2762
chr10	58901362	58901379	protein_coding	Oit3	exon	ENSMUSG00000009654	NonProperStrand	11	chr10	39978273	39978363	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-8.8788
chr17	86087447	86087465	protein_coding	Six2	utr5	ENSMUSG00000024134	ProperStrand	3	chr8	72287172	72287188	protein_coding	Zfp866	utr3	ENSMUSG00000043090	NonProperStrand	134	1	-18.0816
chr12	60141323	60141441	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	chr15	79908928	79909019	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	2	-0.8088
chr1	123419286	123419304	protein_coding	Htr5b	intron	ENSMUSG00000050534	NonProperStrand	3	chr4	131908389	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-12.4687
chr13	55348846	55348922	protein_coding	Nsd1	exon	ENSMUSG00000021488	ProperStrand	186	chr11	69483146	69483236	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	5	-5.4071
chr14	14773548	14773571	antisense	Gm11100	.	ENSMUSG00000079357	NonProperStrand	5	chr5	74489595	74489680	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-8.8134
chr14	32042378	32042394	protein_coding	Sema3g	utr3	ENSMUSG00000021904	NonProperStrand	47	chr11	106362304	106362337	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-6.3242
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr7	112087206	112087223	protein_coding	Olfr669	exon	ENSMUSG00000073916	NonProperStrand	2	1	-16.9147
chr1	79791497	79791541	protein_coding	Serpine2	utr3	ENSMUSG00000026249	ProperStrand	11	chr9	114299644	114299734	protein_coding	Crtap	utr5	ENSMUSG00000032431	ProperStrand	15	1	-19.7864
chr11	35853330	35853348	protein_coding	Odz2	exon	ENSMUSG00000049336	NonProperStrand	43	chr2	32818883	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-6.1258
chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	chr9	120037992	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	2	-0.8911
chr16	38531153	38531169	protein_coding	Poglut1	intron	ENSMUSG00000034064	NonProperStrand	2	chr4	131908357	131908454	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-8.3123
chr5	121655012	121655112	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	NonProperStrand	38	chr2	166888977	166889010	snoRNA	ENSMUSG00000077515_SNORD12	.	ENSMUSG00000077515	NonProperStrand	1	1	-inf
chr14	49119709	49119726	protein_coding	6720456H20Rik	exon	ENSMUSG00000036339	NonProperStrand	8	chr11	55296195	55296332	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	4	-20.0535
chr4	69892609	69892625	protein_coding	Cdk5rap2	intron	ENSMUSG00000039298	NonProperStrand	3	chr8	73419876	73419912	protein_coding	Rpl18a	exon	ENSMUSG00000045128	ProperStrand	394	1	-15.8961
chr1	40081250	40081516	protein_coding	Map4k4	exon	ENSMUSG00000026074	ProperStrand	348	chr4	24555748	24555764	protein_coding	Klhl32	intron	ENSMUSG00000040387	ProperStrand	67	1	-9.5698
chr8	72613823	72613839	protein_coding	Hapln4	utr3	ENSMUSG00000007594	NonProperStrand	85	chr11	116535914	116535960	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	1	-5.2301
chr13	99220215	99220295	LINE	L2	L2	chr13L299220180	NonProperStrand	1	chr13	99221027	99221117	LINE	L2	L2	chr13L299220996	NonProperStrand	1	1	-inf
chr5	87246067	87246088	protein_coding	Ythdc1	exon	ENSMUSG00000035851	ProperStrand	45	chr8	127203389	127203405	protein_coding	Ttc13	intron	ENSMUSG00000037300	NonProperStrand	10	1	-17.6220
chr13	9165622	9165722	protein_coding	Larp4b	exon	ENSMUSG00000033499	ProperStrand	53	chr3	152450610	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	6	-19.5550
chr3	35754922	35755007	protein_coding	Atp11b	utr3	ENSMUSG00000037400	ProperStrand	39	chr17	24857716	24857806	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	6	-16.6387
chr6	30377722	30377747	protein_coding	Klhdc10	exon	ENSMUSG00000029775	ProperStrand	14	chr9	15119631	15119712	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-8.9070
chr2	180708619	180708661	protein_coding-noncoding	Arfgap1	utr5	ENSMUSG00000027575	ProperStrand	8	chr7	151023983	151024083	protein_coding	Dhcr7	intron	ENSMUSG00000058454	ProperStrand	30	8	-inf
chr1	82882747	82882980	protein_coding	Agfg1	exon	ENSMUSG00000026159	ProperStrand	25	chr15	79908984	79909006	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-7.2107
chr12	114361443	114365009	protein_coding	Mta1	exon	ENSMUSG00000021144	ProperStrand	74	chr8	74446729	74446745	protein_coding	Zfp617	intron	ENSMUSG00000066880	NonProperStrand	208	1	-10.3982
chr17	45803046	45803269	protein_coding	Tmem63b	exon	ENSMUSG00000036026	ProperStrand	93	chr9	15118333	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-2.6822
chr7	52216134	52216237	protein_coding	Cpt1c	exon	ENSMUSG00000007783	ProperStrand	94	chr7	117190023	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.5369
chr18	61743438	61743538	protein_coding-noncoding	Csnk1a1	utr5	ENSMUSG00000024576	ProperStrand	5	chr18	53895367	53895402	protein_coding	Cep120	exon	ENSMUSG00000048799	ProperStrand	91	1	-17.4757
chr11	50109829	50125108	protein_coding	Canx	exon	ENSMUSG00000020368	ProperStrand	296	chr9	15119641	15119736	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	8	-7.8247
chr11	79871360	79871376	protein_coding	Crlf3	exon	ENSMUSG00000017561	ProperStrand	47	chr7	30066891	30066931	protein_coding	Spint2	utr5	ENSMUSG00000074227	ProperStrand	82	1	-13.1801
chr11	120832959	120833720	protein_coding	Csnk1d	exon	ENSMUSG00000025162	ProperStrand	37	chr4	131908686	131908751	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.9439
chr2	168478160	168478216	protein_coding	Atp9a	exon	ENSMUSG00000027546	ProperStrand	16	chr3	123210878	123210911	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-7.5072
chr19	29091845	29091922	protein_coding	Cdc37l1	utr3	ENSMUSG00000024780	ProperStrand	13	chr4	116827116	116827157	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	3	-19.7249
chr11	32620600	32622075	protein_coding	Fbxw11	exon	ENSMUSG00000020271	ProperStrand	36	chr9	120038018	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-5.7013
chr5	130295414	130295471	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	chr7	51505224	51505308	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	4	-4.2188
chr1	124298935	124298951	LINE	Lx3_Mus	L1	chr1Lx3_Mus124298684	ProperStrand	10	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-9.4709
chr17	80461285	80461301	protein_coding	Hnrpll	exon	ENSMUSG00000024095	ProperStrand	27	chr5	151755616	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-9.3465
chr11	69725296	69725458	protein_coding	Neurl4	exon	ENSMUSG00000047284	ProperStrand	28	chr19	8800378	8800468	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-4.9806
chr15	78994730	78994746	protein_coding	Sox10	utr5	ENSMUSG00000033006	NonProperStrand	8	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	5	-20.2402
chr7	31371569	31371669	protein_coding	Wbp7	exon	ENSMUSG00000006307	ProperStrand	180	chr4	131908687	131908734	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-0.8983
chr4	46508066	46508157	snoRNA	ENSMUSG00000064410_SNORA36	.	ENSMUSG00000064410	ProperStrand	133	chr16	23111702	23111778	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-2.7156
chr17	78314458	78314548	LINE	Lx9	L1	chr17Lx978314349	NonProperStrand	1	chr17	78314621	78314711	LTR	IAPEY3_LTR	ERVK	chr17IAPEY3_LTR78314598	NonProperStrand	1	1	-inf
chr10	80372737	80380712	protein_coding	Lmnb2	exon	ENSMUSG00000062075	ProperStrand	14	chr7	52378398	52378443	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	1	-11.4621
chr2	181421662	181421695	protein_coding-noncoding	Tcea2	utr5	ENSMUSG00000059540	ProperStrand	1	chr19	8963082	8963172	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-inf
chr9	59526704	59526737	protein_coding	Pkm2	utr3	ENSMUSG00000032294	ProperStrand	1296	chr19	8798765	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	3	-1.0962
chr11	69463981	69464365	protein_coding	Fxr2	exon	ENSMUSG00000018765	ProperStrand	40	chr4	131865385	131865465	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-4.7765
chr4	118804429	118808408	protein_coding	Slc2a1	exon	ENSMUSG00000028645	ProperStrand	361	chr7	116664811	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	4	-1.9103
chr8	81187204	81187250	protein_coding	Slc10a7	intron	ENSMUSG00000031684	ProperStrand	55	chr9	64026203	64026232	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	1	-8.8540
chr15	98735204	98735239	protein_coding	Lmbr1l	exon	ENSMUSG00000022999	ProperStrand	8	chr7	31025336	31025354	protein_coding	Wdr62	exon	ENSMUSG00000037020	ProperStrand	16	3	-19.5340
chr1	138178661	138178677	protein_coding	Camsap2	exon	ENSMUSG00000041570	NonProperStrand	116	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-6.4315
chr10	29174133	29219751	protein_coding	Rspo3	exon	ENSMUSG00000019880	ProperStrand	15	chr4	131826062	131826124	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	1	-12.0348
chr12	17281273	17290831	protein_coding	Pdia6	exon	ENSMUSG00000020571	ProperStrand	114	chr11	69483136	69483228	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	7	-12.2092
chr4	131908417	131908507	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr16	37777391	37777408	protein_coding	Fstl1	exon	ENSMUSG00000022816	ProperStrand	179	1	-5.1124
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chrX	156315498	156315519	protein_coding	Sh3kbp1	intron	ENSMUSG00000040990	ProperStrand	67	1	-6.7056
chrX	75528335	75528425	LTR	ETnERV2-int	ERVK	chrXETnERV2-int75524771	ProperStrand	1	chrX	75528457	75528547	LTR	RLTR13D6	ERVK	chrXRLTR13D675528412	ProperStrand	1	1	-inf
chr1	135554402	135554483	protein_coding	Zc3h11a	intron	ENSMUSG00000026464	ProperStrand	102	chr3	123210854	123210889	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.2662
chr8	74000451	74008417	protein_coding	Ano8	exon	ENSMUSG00000034863	NonProperStrand	171	chr4	131865855	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.0324
chr19	38869531	38869547	protein_coding	Noc3l	exon	ENSMUSG00000024999	NonProperStrand	149	chr15	82980193	82980225	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-5.3500
chr2	98174031	98174048	LTR	IAPLTR3-int	ERVK	chr2IAPLTR3-int98170118	ProperStrand	37	chr15	5067418	5067663	protein_coding	Rpl37	exon	ENSMUSG00000041841	ProperStrand	69	1	-14.0089
chr11	119954784	119954800	protein_coding	2410002I01Rik	exon	ENSMUSG00000025377	ProperStrand	9	chr2	26494708	26494804	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	4	-19.3371
chr3	135268101	135268121	protein_coding	Nfkb1	exon	ENSMUSG00000028163	ProperStrand	55	chr4	131908252	131908407	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-4.5191
chr10	17547610	17547626	protein_coding	Txlnb	exon	ENSMUSG00000039891	ProperStrand	70	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-8.6178
chr19	8949837	8950086	protein_coding	Ubxn1	utr3	ENSMUSG00000071655	ProperStrand	68	chr5	121655058	121655148	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.5158
chr18	20991496	20991542	protein_coding	Trappc8	exon	ENSMUSG00000033382	ProperStrand	43	chr15	77356785	77356801	protein_coding	Apol7c	exon	ENSMUSG00000044309	ProperStrand	197	1	-11.6008
chr2	126623482	126623582	protein_coding	Trpm7	exon	ENSMUSG00000027365	ProperStrand	34	chr18	35716765	35716831	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.1571
chr1	187244061	187244122	protein_coding	Eprs	exon	ENSMUSG00000026615	ProperStrand	149	chr7	117189864	117189933	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-4.4440
chr13	14713018	14713046	protein_coding	Psma2	exon	ENSMUSG00000015671	ProperStrand	26	chr2	29926515	29926612	protein_coding	Set	utr3	ENSMUSG00000054766	ProperStrand	167	2	-18.9368
chr1	59539683	59539700	protein_coding	Fzd7	utr5	ENSMUSG00000041075	ProperStrand	373	chr3	153573534	153573579	snoRNA	ENSMUSG00000064731_Snord45b	.	ENSMUSG00000064731	ProperStrand	205	1	-7.2022
chrX	149828130	149828146	protein_coding	Klf8	utr3	ENSMUSG00000041649	NonProperStrand	107	chr7	52382752	52382832	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-5.6132
chr9	44140102	44140651	protein_coding	Dpagt1	exon	ENSMUSG00000032123	ProperStrand	1	chr3	68889348	68889368	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-inf
chr11	84722945	84722961	protein_coding	Myo19	exon	ENSMUSG00000020527	ProperStrand	82	chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	1	-8.2145
chr8	108479374	108479563	protein_coding	Slc12a4	exon	ENSMUSG00000017765	ProperStrand	25	chr14	76247731	76247811	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-5.8745
chr10	90581050	90581140	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	chr12	110887828	110887894	snoRNA	ENSMUSG00000084549_SNORD113	.	ENSMUSG00000084549	ProperStrand	196	1	-2.6266
chr1	84790857	84811408	protein_coding	Trip12	exon	ENSMUSG00000026219	ProperStrand	248	chr10	93342824	93349779	protein_coding	Metap2	exon	ENSMUSG00000036112	ProperStrand	78	1	-9.9410
chr15	27494711	27497279	protein_coding	Ank	exon	ENSMUSG00000022265	ProperStrand	37	chr9	120038554	120038634	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	13	-20.0796
chr10	6063958	6063977	protein_coding	Akap12	intron	ENSMUSG00000038587	ProperStrand	1008	chr13	96100591	96100691	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	2	-4.6606
chr12	60235045	60235135	protein_coding	Ctage5	intron	ENSMUSG00000021000	ProperStrand	35	chr5	108334200	108334280	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-5.8733
chr2	146873386	146873453	protein_coding	Xrn2	exon	ENSMUSG00000027433	ProperStrand	48	chr17	24651696	24653471	protein_coding	Traf7	exon	ENSMUSG00000052752	ProperStrand	28	1	-15.2935
chr1	75314097	75314128	protein_coding	Dnpep	utr5	ENSMUSG00000026209	ProperStrand	18	chr7	135031145	135031162	protein_coding	Prss53	exon	ENSMUSG00000044139	ProperStrand	9	1	-18.8602
chr7	105758633	105758723	protein_coding	2210018M11Rik	intron	ENSMUSG00000035401	ProperStrand	24	chr9	120039566	120039646	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-5.0594
chr5	122079990	122080176	protein_coding	Acad10	exon	ENSMUSG00000029456	ProperStrand	60	chr5	122055618	122055708	protein_coding	Acad12	exon	ENSMUSG00000042647	ProperStrand	63	57	-19.9169
chr9	15118245	15118380	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	chr14	31827476	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	14	-5.5894
chr17	45643933	45643995	protein_coding	Aars2	exon	ENSMUSG00000023938	ProperStrand	14	chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	1	-11.0650
chr11	101816472	101816489	antisense	4930417O22Rik	.	ENSMUSG00000071818	ProperStrand	4	chr7	109607963	109608030	protein_coding	Rrm1	exon	ENSMUSG00000030978	ProperStrand	14	1	-inf
chr18	63238395	63238411	protein_coding	Fam38b	exon	ENSMUSG00000041482	NonProperStrand	50	chr4	131866169	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-6.7406
chr8	32260335	32260375	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	chr4	3762261	3762293	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	2	-2.5320
chr16	57391630	57391742	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr4	131865854	131865954	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	NonProperStrand	39	2	-17.3328
chr11	97259684	97259752	protein_coding	Socs7	utr3	ENSMUSG00000038485	ProperStrand	12	chr5	130300487	130300524	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-5.5517
chr8	77623793	77623883	protein_coding	Hmox1	exon	ENSMUSG00000005413	ProperStrand	12	chr12	17552958	17553038	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-8.3166
chr10	127567878	127567894	protein_coding	Rbms2	utr3	ENSMUSG00000040043	NonProperStrand	7	chr18	35714216	35714263	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-7.7147
chr10	126963041	126963131	protein_coding	Nxph4	utr3	ENSMUSG00000040258	ProperStrand	8	chr10	110918552	110918632	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-7.4365
chr2	164250353	164250453	protein_coding	Sdc4	utr3	ENSMUSG00000017009	ProperStrand	177	chr11	48614377	48616708	snoRNA	ENSMUSG00000064500_SNORD95	.	ENSMUSG00000064500	ProperStrand	100	4	-inf
chr7	25670529	25670558	protein_coding	Rps19	exon	ENSMUSG00000040952	ProperStrand	101	chr11	48616673	48616706	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	2	-13.2208
chr15	9016240	9016324	protein_coding	1110020G09Rik	intron	ENSMUSG00000022253	ProperStrand	15	chr4	133843609	133843627	protein_coding	Pdik1l	utr5	ENSMUSG00000050890	NonProperStrand	4	1	-26.3461
chrX	12709255	12709335	protein_coding	Usp9x	exon	ENSMUSG00000031010	ProperStrand	174	chr8	13785815	13786167	protein_coding	Upf3a	exon	ENSMUSG00000038398	ProperStrand	6	1	-15.9151
chr5	35434249	35434349	protein_coding	Lrpap1	utr3	ENSMUSG00000029103	ProperStrand	43	chr15	5068442	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	2	-10.8660
chr8	73419657	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	chr11	106874226	106874252	tRNA	tRNA945-ArgCCG	.	375494	ProperStrand	133	1	-1.7861
chr12	60141408	60141488	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	chr3	96132424	96132514	snRNA	ENSMUSG00000075978_U1	.	ENSMUSG00000075978	ProperStrand	132	1	-5.2810
chr10	117227045	117227061	protein_coding	Nup107	exon	ENSMUSG00000052798	NonProperStrand	66	chr16	23111447	23111497	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.1306
chr7	133938792	133938872	protein_coding	Aldoa	utr3	ENSMUSG00000030695	ProperStrand	721	chr2	108944066	108944155	protein_coding	Mettl15	intron	ENSMUSG00000057234	ProperStrand	1	1	-inf
chr11	90247906	90247923	protein_coding	Hlf	intron	ENSMUSG00000003949	NonProperStrand	25	chr16	23110827	23110965	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.2939
chr1	154414553	154414571	protein_coding	Rgl1	intron	ENSMUSG00000026482	ProperStrand	8	chr2	26494763	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-7.0621
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr8	87340233	87340249	protein_coding	Dand5	exon	ENSMUSG00000053226	ProperStrand	34	1	-8.9357
chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	chr14	64149091	64149127	protein_coding	Mtmr9	exon	ENSMUSG00000035078	ProperStrand	14	1	-13.2421
chr14	104648417	104648436	LINE	L2	L2	chr14L2104648388	ProperStrand	4	chr1	134374614	134374704	protein_coding	Rbbp5	intron	ENSMUSG00000026439	ProperStrand	22	4	-inf
chr10	79579061	79579077	protein_coding	Stk11	utr5	ENSMUSG00000003068	ProperStrand	24	chr3	123210899	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.6860
chr10	80642152	80642192	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr4	122968631	122968721	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	5	-3.4147
chr14	32320641	32320741	protein_coding	Eaf1	utr3	ENSMUSG00000021890	ProperStrand	10	chr11	6428035	6428088	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-6.6888
chr2	90235313	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	134465558	134465574	protein_coding	Nfasc	utr3	ENSMUSG00000026442	NonProperStrand	48	1	-4.8919
chr9	22163124	22163172	protein_coding	Anln	exon	ENSMUSG00000036777	ProperStrand	133	chr15	98356822	98356912	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	2	-10.0133
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	36097663	36097764	protein_coding	Abcf1	exon	ENSMUSG00000038762	ProperStrand	206	2	-3.9839
chr12	68762117	68762209	LINE	L1_Mus2	L1	chr12L1_Mus268762115	ProperStrand	2	chr7	54442283	54442474	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	2	-inf
chr7	112852032	112852049	protein_coding	Dnhd1	exon	ENSMUSG00000030882	NonProperStrand	6	chr17	25996060	25996076	protein_coding	Wdr90	exon	ENSMUSG00000073434	ProperStrand	91	1	-17.0728
chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	chr11	83107805	83107893	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	1	-5.4007
chr11	101386947	101387047	protein_coding	Brca1	exon	ENSMUSG00000017146	ProperStrand	51	chr3	95980359	95980410	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-7.1809
chr17	64658885	64658985	protein_coding	Pja2	exon	ENSMUSG00000024083	ProperStrand	27	chr5	142649656	142649673	protein_coding	Sdk1	exon	ENSMUSG00000039683	NonProperStrand	21	1	-17.0429
chr12	32718500	32718520	protein_coding	Prkar2b	intron	ENSMUSG00000002997	ProperStrand	6	chr4	131865891	131865986	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-10.2022
chr2	127041865	127056336	protein_coding	Snrnp200	exon	ENSMUSG00000003660	ProperStrand	203	chr15	79908930	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	4	-10.7596
chrX	67718176	67718217	protein_coding	BC023829	exon	ENSMUSG00000073139	ProperStrand	4	chr9	15118245	15118322	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-14.7772
chr9	15119996	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	chr1	187066817	187066917	snoRNA	ENSMUSG00000077571_Snora36b	.	ENSMUSG00000077571	ProperStrand	244	1	-4.5126
chr16	14181135	14181225	protein_coding	Nde1	intron	ENSMUSG00000022678	ProperStrand	23	chr16	14153375	14153465	protein_coding	4921513D23Rik	intron	ENSMUSG00000060657	NonProperStrand	3	1	-inf
chr7	106630787	106630858	protein_coding	Rps3	exon	ENSMUSG00000030744	ProperStrand	159	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-1.8513
chr2	119558696	119558770	protein_coding	Rtf1	utr3	ENSMUSG00000027304	ProperStrand	12	chr2	166890802	166890838	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	1	-13.6665
chr17	56420899	56420989	protein_coding	Plin3	exon	ENSMUSG00000024197	ProperStrand	23	chr5	111121100	111121180	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-8.3559
chrX	71533839	71534003	protein_coding	Taz	exon	ENSMUSG00000009995	ProperStrand	59	chr4	131865855	131865910	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.7940
chr11	98854450	98859222	protein_coding	Top2a	utr3	ENSMUSG00000020914	ProperStrand	324	chr14	76247740	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-2.4899
chr7	88286918	88298350	protein_coding	Slc28a1	exon	ENSMUSG00000025726	ProperStrand	8	chr16	23110915	23111005	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.2180
chr17	39985201	39985763	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr10	110918547	110918695	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	18	-3.7972
chr1	134516040	134516089	protein_coding	Nfasc	exon	ENSMUSG00000026442	ProperStrand	25	chr11	120347051	120349421	protein_coding	Mrpl12	exon	ENSMUSG00000039640	ProperStrand	49	1	-15.5001
chr3	157729963	157729979	protein_coding	Lrrc40	utr3	ENSMUSG00000063052	ProperStrand	147	chr3	123210917	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-0.8065
chr4	21606097	21606114	protein_coding	Prdm13	exon	ENSMUSG00000040478	ProperStrand	51	chr4	131908236	131908371	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.6592
chr19	12011743	12011819	protein_coding	Patl1	exon	ENSMUSG00000046139	ProperStrand	49	chrX	34622906	34622952	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	4	-11.8464
chr5	31361372	31361462	protein_coding	Cad	exon	ENSMUSG00000013629	ProperStrand	260	chr11	68886930	68887010	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-1.6045
chr9	72588598	72588670	protein_coding	Nedd4	intron	ENSMUSG00000032216	ProperStrand	308	chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	4	-16.7932
chr5	132213625	132213642	protein_coding	Auts2	intron	ENSMUSG00000029673	ProperStrand	71	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-10.4247
chr14	51427119	51427183	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr16	37777390	37777408	protein_coding	Fstl1	exon	ENSMUSG00000022816	ProperStrand	179	1	-5.0635
chrX	54485031	54485048	protein_coding	Arhgef6	utr3	ENSMUSG00000031133	NonProperStrand	3	chr16	23110893	23110916	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr11	69455577	69464527	protein_coding	Fxr2	exon	ENSMUSG00000018765	ProperStrand	40	chr4	131908236	131908447	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-3.7010
chr18	38004334	38004359	protein_coding	Diap1	utr3	ENSMUSG00000024456	ProperStrand	77	chr1	155287305	155287355	snoRNA	ENSMUSG00000064435_SNORA4	.	ENSMUSG00000064435	ProperStrand	263	1	-9.8497
chr5	42136455	42136473	Low_complexity	GA-rich	Low_complexity	chr5GA-rich42136449	NonProperStrand	106	chr19	6504198	6504219	protein_coding	Nrxn2	intron	ENSMUSG00000033768	NonProperStrand	8	1	-16.2821
chr2	80155844	80155860	protein_coding	Dnajc10	utr5	ENSMUSG00000027006	NonProperStrand	2	chrX	34622927	34623017	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-10.4435
chr11	120819301	120819401	protein_coding	Slc16a3	exon	ENSMUSG00000025161	ProperStrand	98	chr10	127521205	127521269	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	1	-7.8136
chr19	40681883	40682123	protein_coding	Tctn3	exon	ENSMUSG00000025008	NonProperStrand	3	chr16	23110873	23110940	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr19	10696110	10696158	protein_coding	Ddb1	exon	ENSMUSG00000024740	ProperStrand	304	chr18	33954882	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	3	-3.0076
chr7	38354919	38354935	protein_coding	Zfp536	exon	ENSMUSG00000043456	NonProperStrand	236	chr2	26494776	26494842	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-1.9163
chr14	64437799	64437816	protein_coding	Xkr6	exon	ENSMUSG00000035067	ProperStrand	10	chr5	19721265	19721281	protein_coding	Magi2	exon	ENSMUSG00000040003	ProperStrand	49	1	-17.5865
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	2	-8.4649
chr5	20492615	20492649	protein_coding	Ptpn12	utr3	ENSMUSG00000028771	ProperStrand	24	chr14	63287575	63287612	snoRNA	ENSMUSG00000089531_SNORA73	.	ENSMUSG00000089531	ProperStrand	123	1	-13.7288
chr4	118966397	118966847	protein_coding	Ybx1	exon	ENSMUSG00000028639	ProperStrand	171	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-5.6589
chr12	111932849	111932908	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr3	32237977	32238008	protein_coding	Zmat3	utr3	ENSMUSG00000027663	ProperStrand	62	1	-8.1939
chr17	56257328	56257344	LTR	RLTR25B	ERVK	chr17RLTR25B56257276	NonProperStrand	75	chr8	13876173	13876226	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-6.7008
chr10	109640049	109640066	SINE	RSINE1	B4	chr10RSINE1109639979	ProperStrand	51	chr15	79913295	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-3.8950
chr5	100855902	100855973	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr11	55292248	55292322	protein_coding	G3bp1	intron	ENSMUSG00000018583	ProperStrand	106	2	-9.0225
chr2	35547852	35547868	protein_coding	Dab2ip	utr5	ENSMUSG00000026883	NonProperStrand	58	chr8	73419732	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.1915
chr8	126532741	126532831	protein_coding	Taf5l	intron	ENSMUSG00000038697	ProperStrand	23	chr1	162965531	162965588	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-12.1089
chr9	108233232	108237394	protein_coding	Rhoa	exon	ENSMUSG00000007815	ProperStrand	45	chr4	116826698	116826720	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	5	-20.2587
chr17	13200932	13201147	protein_coding	Sod2	exon	ENSMUSG00000006818	ProperStrand	17	chr2	63936037	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-10.4136
chr11	44333223	44333270	protein_coding	Rnf145	intron	ENSMUSG00000019189	ProperStrand	46	chr11	86937870	86937929	protein_coding	Fam33a	utr3	ENSMUSG00000020492	ProperStrand	1	1	-inf
chr2	163820943	163820993	protein_coding	Ywhab	utr5	ENSMUSG00000018326	ProperStrand	33	chr18	35716699	35716789	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.2115
mmu-miR-2137	0	19	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	chr14	76247753	76247825	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-2.5823
chr4	43505657	43505737	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr4	151925932	151926022	protein_coding	Nphp4	exon	ENSMUSG00000039577	ProperStrand	33	2	-7.0202
chr14	58456725	58456750	protein_coding	Zdhhc20	intron	ENSMUSG00000021969	ProperStrand	10	chr8	98269959	98270009	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-9.1627
chr14	83807362	83807442	LINE	L1_Mus3	L1	chr14L1_Mus383807023	NonProperStrand	1	chr1	43695359	43695449	LINE	L1_Mus2	L1	chr1L1_Mus243695247	ProperStrand	1	1	-inf
chrX	7651742	7651762	protein_coding	Suv39h1	utr5	ENSMUSG00000039231	NonProperStrand	3	chr3	123210853	123210983	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-inf
chr2	121228426	121228470	protein_coding	Catsper2	intron	ENSMUSG00000033486	ProperStrand	7	chr7	117189933	117190023	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	5	-inf
chr11	53084464	53084536	protein_coding	Hspa4	exon	ENSMUSG00000020361	ProperStrand	69	chr18	33954851	33954941	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	3	-8.1878
chr2	147009105	147009122	protein_coding	Nkx2-2	utr3	ENSMUSG00000027434	NonProperStrand	84	chr3	136598364	136598504	protein_coding	Ppp3ca	utr3	ENSMUSG00000028161	ProperStrand	45	1	-13.2192
chr2	130266118	130266208	protein_coding-noncoding	Vps16	utr5	ENSMUSG00000027411	ProperStrand	1	chr10	23505173	23505253	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-inf
chr7	106630297	106630822	protein_coding	Rps3	exon	ENSMUSG00000030744	ProperStrand	159	chr17	24857740	24857830	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-0.8780
chr7	150717367	150717425	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	chr19	8963032	8963048	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-2.5761
chr3	89813092	89813165	protein_coding	Ubap2l	exon	ENSMUSG00000042520	ProperStrand	88	chr7	29136613	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-3.2094
chr18	73693170	73693186	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr13	96100567	96100692	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	1	-1.0052
mmu-miR-6240	1	26	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr10	95499367	95499383	protein_coding	Eea1	utr3	ENSMUSG00000036499	ProperStrand	82	2	-8.6842
chr14	47861351	47861409	protein_coding	Wdhd1	exon	ENSMUSG00000037572	ProperStrand	35	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	5	-20.7657
chr6	122664332	122664378	protein_coding	Nanog	utr3	ENSMUSG00000012396	ProperStrand	66	chr11	101466286	101466351	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	3	-18.8540
chr18	82662186	82662202	protein_coding	Mbp	intron	ENSMUSG00000041607	NonProperStrand	185	chr7	117189876	117189919	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-1.4597
chr4	86222007	86222029	protein_coding	Rraga	exon	ENSMUSG00000070934	ProperStrand	13	chr5	108334222	108334331	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-7.8726
chr18	10052133	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr19	39917317	39917333	protein_coding	Cyp2c69	utr3	ENSMUSG00000092008	NonProperStrand	83	1	-8.1517
chr5	21246358	21246375	protein_coding	Pmpcb	exon	ENSMUSG00000029017	NonProperStrand	1	chr7	87495940	87495996	protein_coding	Man2a2	utr3	ENSMUSG00000038886	ProperStrand	18	1	-inf
chr17	25092975	25093065	protein_coding	Hn1l	exon	ENSMUSG00000024165	ProperStrand	45	chr17	24857750	24857830	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-4.8746
chr13	41108113	41108156	protein_coding	Pak1ip1	utr3	ENSMUSG00000038683	ProperStrand	49	chr15	79908957	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-5.8699
chr6	47738090	47738116	misc_RNA	Y_RNA	.	ENSMUSG00000065701	ProperStrand	129	chr16	23109051	23109090	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	3	-13.3237
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	75398645	75398687	protein_coding	Chchd10	utr5	ENSMUSG00000049422	ProperStrand	140	1	-2.8987
chr11	95821254	95821288	protein_coding	Igf2bp1	utr3	ENSMUSG00000013415	ProperStrand	140	chr2	121949510	121949526	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	1	-8.6014
chr5	67074984	67078100	protein_coding	Uchl1	exon	ENSMUSG00000029223	ProperStrand	29	chr17	35087895	35087917	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-6.6350
chr11	77995229	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	chr1	162966815	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	2	-0.9180
chr11	103248305	103248346	protein_coding	Plekhm1	exon	ENSMUSG00000034247	ProperStrand	23	chr7	29136553	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.1043
chr4	116740279	116740308	protein_coding-noncoding	Eif2b3	utr5	ENSMUSG00000028683	ProperStrand	6	chr2	49716995	49717013	protein_coding	Lypd6b	intron	ENSMUSG00000026765	ProperStrand	6	1	-18.9143
chr12	87030317	87049503	protein_coding	Batf	exon	ENSMUSG00000034266	ProperStrand	28	chr8	129468802	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	2	-9.6371
chr7	108971290	108971306	protein_coding	Inppl1	utr3	ENSMUSG00000032737	ProperStrand	272	chr6	115757174	115757833	protein_coding	Rpl32	exon	ENSMUSG00000057841	ProperStrand	137	1	-8.6299
chr11	77996562	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	chr19	8799832	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	10	-4.7242
chr15	86131121	86131211	protein_coding	Tbc1d22a	intron	ENSMUSG00000051864	ProperStrand	15	chr11	69483153	69483233	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-5.0353
chr11	60003626	60003642	protein_coding	Rai1	exon	ENSMUSG00000062115	NonProperStrand	81	chr2	158182181	158182280	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	4	-14.0774
chr6	115757892	115758748	protein_coding	Rpl32	utr5	ENSMUSG00000057841	ProperStrand	137	chr1	162967540	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	3	-5.5808
chr4	118920159	118920524	protein_coding	Lepre1	exon	ENSMUSG00000028641	ProperStrand	21	chr16	23110907	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	9	-18.8686
chr11	87172190	87172206	protein_coding	Ppm1e	exon	ENSMUSG00000046442	ProperStrand	112	chr9	15118245	15118367	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-4.1887
chr11	45956514	45957304	protein_coding	Adam19	exon	ENSMUSG00000011256	ProperStrand	134	chr9	104978029	104978047	protein_coding	Mrpl3	utr3	ENSMUSG00000032563	ProperStrand	13	1	-14.8163
chr17	34250735	34250924	protein_coding	Brd2	exon	ENSMUSG00000024335	ProperStrand	69	chr18	33954818	33954898	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-3.2501
chr18	74310942	74311022	LTR	IAPEY3_LTR	ERVK	chr18IAPEY3_LTR74310961	NonProperStrand	1	chr18	74310819	74310909	LTR	MERVL_2A-int	ERVL	chr18MERVL_2A-int74310169	NonProperStrand	1	1	-inf
chr2	130102051	130102106	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	chr15	5068440	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	12	-8.6001
chr8	13416895	13416912	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr5	23825941	23825957	protein_coding	Kcnh2	exon	ENSMUSG00000038319	ProperStrand	242	2	-6.3531
chr9	64023944	64024764	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	chr9	63868722	63868738	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	1	-4.0580
chr13	63612936	63612952	protein_coding	Ptch1	exon	ENSMUSG00000021466	NonProperStrand	118	chr4	131825994	131826060	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	1	-7.8659
chr4	125845086	125845158	protein_coding-noncoding	Thrap3	utr3	ENSMUSG00000043962	ProperStrand	5	chr4	56910526	56910616	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	5	-inf
chr1	162965531	162967513	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr9	64143734	64143878	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	7	-2.1086
chr9	78023109	78023210	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr7	13516164	13516207	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	1	-1.6748
chr15	101959091	101959116	protein_coding	Spryd3	exon	ENSMUSG00000036966	ProperStrand	14	chr13	34436854	34436870	protein_coding	Slc22a23	utr5	ENSMUSG00000038267	ProperStrand	95	1	-15.3664
chr15	59423771	59432953	protein_coding	Nsmce2	exon	ENSMUSG00000059586	ProperStrand	29	chr8	13876097	13876187	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	2	-13.7033
chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	chr17	35089227	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-1.7665
chr9	90118387	90118411	protein_coding	Tbc1d2b	intron	ENSMUSG00000037410	ProperStrand	5	chr17	50821783	50821866	protein_coding	Plcl2	intron	ENSMUSG00000038910	ProperStrand	10	4	-19.2096
chr11	93820651	93820671	protein_coding	Nme1	utr3	ENSMUSG00000037601	ProperStrand	12	chr11	68886949	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-7.3320
chr13	9833563	9833664	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr7	52382752	52382814	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	6	-2.9262
chr1	187066827	187066917	snoRNA	ENSMUSG00000077571_Snora36b	.	ENSMUSG00000077571	ProperStrand	244	chr8	32260357	32260437	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-2.1042
chr4	131908356	131908457	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr11	50021021	50021074	protein_coding	Sqstm1	exon	ENSMUSG00000015837	ProperStrand	36	4	-22.2005
chr7	3155055	3161352	protein_coding	AU018091	utr3	ENSMUSG00000054753	ProperStrand	42	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-4.9539
chr17	29479800	29484428	protein_coding	Mtch1	exon	ENSMUSG00000024012	ProperStrand	13	chr5	118376503	118376519	protein_coding	Nos1	exon	ENSMUSG00000029361	NonProperStrand	237	1	-13.6774
chr11	67629305	67629321	protein_coding	Dhrs7c	exon	ENSMUSG00000033044	NonProperStrand	1	chr15	76489242	76489695	protein_coding	Cyhr1	exon	ENSMUSG00000053929	NonProperStrand	1	1	-inf
chr17	4082110	4082183	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chrX	132781316	132781351	protein_coding	Wbp5	utr3	ENSMUSG00000042712	ProperStrand	3	2	-inf
chr3	67239447	67239492	protein_coding	Gfm1	exon	ENSMUSG00000027774	ProperStrand	31	chr5	130295424	130295503	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	4	-18.9814
chr10	57939008	57939055	protein_coding	Ranbp2	exon	ENSMUSG00000003226	ProperStrand	52	chr4	131908779	131908893	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-2.6981
chr10	31070803	31070827	protein_coding	Tpd52l1	intron	ENSMUSG00000000296	NonProperStrand	3	chr12	41452324	41456446	protein_coding	Dock4	exon	ENSMUSG00000035954	ProperStrand	41	1	-inf
chr10	80267291	80267308	protein_coding	Sf3a2	exon	ENSMUSG00000020211	ProperStrand	50	chr7	51097700	51097718	protein_coding	Klk5	exon	ENSMUSG00000074155	ProperStrand	29	1	-15.1547
chr15	5184830	5184847	protein_coding	Ptger4	exon	ENSMUSG00000039942	NonProperStrand	8	chr2	26494715	26494825	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-11.5531
chr3	99987977	99988067	protein_coding	Gdap2	intron	ENSMUSG00000027865	ProperStrand	3	chr19	8800361	8800441	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-9.7434
chr19	8800380	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	chr11	6520326	6520458	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	7	-2.5780
chr11	106897503	106897521	protein_coding-noncoding	Bptf	utr3	ENSMUSG00000040481	NonProperStrand	3	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	3	-inf
chr7	52684848	52684865	protein_coding	Ruvbl2	exon	ENSMUSG00000003868	ProperStrand	41	chr1	162968460	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	2	-11.0292
chr17	66468411	66468427	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	chr9	15121035	15121090	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	1	-6.2761
chr5	20300220	20300270	protein_coding	Phtf2	exon	ENSMUSG00000039987	ProperStrand	9	chr4	131908755	131908788	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.5343
chr19	4286796	4286896	protein_coding	Adrbk1	utr3	ENSMUSG00000024858	ProperStrand	37	chr16	23111418	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-3.6133
chr14	26474692	26474709	protein_coding	Zmiz1	exon	ENSMUSG00000007817	ProperStrand	34	chr3	116606223	116606248	protein_coding	Frrs1	utr3	ENSMUSG00000033386	ProperStrand	27	1	-16.0538
chr7	29100801	29100850	protein_coding	Supt5h	exon	ENSMUSG00000003435	ProperStrand	123	chr2	26494772	26494800	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	4	-7.2862
chr4	126541085	126541185	protein_coding	Zmym4	utr3	ENSMUSG00000042446	ProperStrand	94	chr1	162967755	162967806	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	1	-9.3464
chr17	35087879	35087960	processed_transcript	1110038B12Rik	.	ENSMUSG00000092203	ProperStrand	126	chr17	35088957	35088989	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	2	-7.3713
chr15	79908960	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	chr16	23109051	23109094	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	3	-2.0065
chr3	19528533	19528550	protein_coding	1700064H15Rik	exon	ENSMUSG00000082766	NonProperStrand	78	chr17	35088970	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-5.3545
chr4	108428434	108428453	protein_coding	Zfyve9	intron	ENSMUSG00000034557	NonProperStrand	3	chr8	73115775	73115791	protein_coding	Ell	utr3	ENSMUSG00000070002	NonProperStrand	134	1	-18.0816
chr13	14248378	14248468	protein_coding	Arid4b	intron	ENSMUSG00000039219	ProperStrand	28	chr11	69481363	69481443	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-4.6331
chr10	4999647	4999663	protein_coding	Syne1	exon	ENSMUSG00000019769	ProperStrand	49	chr3	68889067	68889167	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-3.6288
chr10	19658709	19658726	protein_coding	Map3k5	intron	ENSMUSG00000071369	NonProperStrand	3	chr7	29136525	29136544	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-8.4253
chr5	144945802	144946191	protein_coding	Lmtk2	utr3	ENSMUSG00000038970	ProperStrand	60	chr18	35716770	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-3.8920
chr5	104368500	104368517	SINE	B1_Mur2	Alu	chr5B1_Mur2104368469	ProperStrand	1	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-inf
chr4	134479844	134479860	protein_coding	D4Wsu53e	exon	ENSMUSG00000037266	NonProperStrand	50	chr7	29136525	29136574	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.6778
chr19	30233659	30233702	protein_coding	Gldc	intron	ENSMUSG00000024827	ProperStrand	175	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-5.6139
chr4	3850138	3850191	protein_coding	Plag1	intron	ENSMUSG00000003282	ProperStrand	8	chr11	68886930	68887020	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-8.1810
chr18	70781523	70781596	protein_coding	Mbd2	intron	ENSMUSG00000024513	ProperStrand	10	chr17	35299551	35299641	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-8.3738
chr10	80640858	80642792	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr16	23109046	23109093	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	2	-1.7694
chr8	122129036	122129052	protein_coding	Taf1c	utr5	ENSMUSG00000031832	ProperStrand	26	chr16	23110852	23110957	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.2392
chr6	25111234	25111256	LTR	ORR1A4	MaLR	chr6ORR1A425111188	NonProperStrand	1	chr16	11144152	11144252	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	1	-inf
chr4	116862573	116862663	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	chr2	158182167	158182247	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-1.1592
chr2	138188029	138188045	protein_coding	Btbd3	intron	ENSMUSG00000062098	NonProperStrand	121	chr17	35089228	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-4.1372
chr19	55675907	55675924	protein_coding	Vti1a	intron	ENSMUSG00000024983	ProperStrand	14	chr8	96704128	96704171	protein_coding	Mt1	utr3	ENSMUSG00000031765	ProperStrand	92	1	-15.4404
chr7	95951922	95951941	LINE	L1_Mus2	L1	chr7L1_Mus295951767	ProperStrand	2	chr4	131908689	131908751	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-8.0336
chr6	122679250	122679370	protein_coding	Slc2a3	utr3	ENSMUSG00000003153	ProperStrand	682	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-3.8497
chr1	152270735	152270753	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	chr17	79336220	79336350	protein_coding	Cebpz	exon	ENSMUSG00000024081	ProperStrand	14	1	-11.8679
chr2	168043291	168043331	processed_transcript	RP23-391M18.7	.	ENSMUSG00000093752	ProperStrand	14	chr18	33954816	33954874	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-6.3373
chrX	71480304	71480459	protein_coding	Flna	exon	ENSMUSG00000031328	ProperStrand	134	chr12	88778635	88778699	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-4.9274
chr7	13516148	13516219	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr6	71832550	71832687	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	6	-10.0398
chr12	112207544	112207600	protein_coding	Tecpr2	utr3	ENSMUSG00000021275	ProperStrand	9	chr17	31784200	31784227	protein_coding	U2af1	exon	ENSMUSG00000061613	ProperStrand	17	1	-19.3679
chr8	98227529	98227546	protein_coding	Ndrg4	intron	ENSMUSG00000036564	ProperStrand	22	chr6	120900400	120900446	protein_coding	Mical3	intron	ENSMUSG00000051586	ProperStrand	104	1	-14.2503
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	1	-5.5863
chr4	92976949	92976967	LINE	Lx3C	L1	chr4Lx3C92976180	ProperStrand	1	chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-inf
chr15	79913295	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr3	108228259	108228275	protein_coding	Sars	utr3	ENSMUSG00000068739	NonProperStrand	200	1	-1.5536
chr3	58673399	58673415	protein_coding	Clrn1	intron	ENSMUSG00000043850	NonProperStrand	13	chr5	108334194	108334241	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-7.8726
chr11	101625226	101625316	protein_coding	Dhx8	exon	ENSMUSG00000034931	ProperStrand	48	chr3	68889146	68889226	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-3.6671
chr5	121828827	121828843	protein_coding	Trafd1	exon	ENSMUSG00000042726	ProperStrand	81	chr19	8799581	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-6.1734
chr7	6084052	6084165	protein_coding	Zfp787	exon	ENSMUSG00000046792	ProperStrand	16	chr1	71341491	71341507	protein_coding	Abca12	exon	ENSMUSG00000050296	NonProperStrand	143	4	-20.2475
chr7	108020904	108020994	protein_coding	Arhgef17	utr3	ENSMUSG00000032875	ProperStrand	33	chr18	33954850	33954930	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	3	-11.1097
chr6	9273690	9273780	LINE	L1Md_F2	L1	chr6L1Md_F29271524	ProperStrand	1	chr8	52021007	52021087	LINE	L1Md_A	L1	chr8L1Md_A52018108	ProperStrand	1	1	-inf
chr4	134479844	134479860	protein_coding	D4Wsu53e	exon	ENSMUSG00000037266	NonProperStrand	50	chr9	15119631	15119693	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-5.1174
chr16	87486517	87486546	protein_coding	Cct8	exon	ENSMUSG00000025613	ProperStrand	65	chr3	153573528	153573583	snoRNA	ENSMUSG00000064731_Snord45b	.	ENSMUSG00000064731	ProperStrand	205	1	-10.6881
chr5	101101656	101101710	protein_coding	Coq2	intron	ENSMUSG00000029319	ProperStrand	5	chr3	123210887	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-6.8746
chr5	76753365	76753406	protein_coding	Pdcl2	utr5	ENSMUSG00000029235	ProperStrand	6	chr7	118219574	118219602	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-14.2970
chr2	163388312	163388328	protein_coding	Hnf4a	exon	ENSMUSG00000017950	ProperStrand	34	chr15	103126967	103127021	protein_coding	Copz1	exon	ENSMUSG00000060992	ProperStrand	45	1	-15.0234
chr18	68268045	68268062	protein_coding	D18Ertd653e	intron	ENSMUSG00000024544	ProperStrand	16	chr7	52382264	52382315	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-10.9637
chr14	58423180	58423200	protein_coding	Sap18	utr3	ENSMUSG00000021963	NonProperStrand	2	chr18	35716685	35716765	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-inf
chr3	108230234	108231108	protein_coding	Sars	exon	ENSMUSG00000068739	ProperStrand	45	chr9	15119645	15119731	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.1394
chr16	32889889	32889920	protein_coding	Fyttd1	intron	ENSMUSG00000022800	ProperStrand	31	chr2	26493367	26493472	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	4	-15.7118
chr9	123065930	123065946	protein_coding	Clec3b	exon	ENSMUSG00000025784	ProperStrand	58	chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	1	-12.6356
chr11	32150250	32153936	protein_coding	Nprl3	exon	ENSMUSG00000020289	ProperStrand	8	chr10	23505152	23505232	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-16.0979
chr6	88843476	88847339	protein_coding	Mcm2	exon	ENSMUSG00000002870	ProperStrand	83	chr10	90581059	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	2	-7.0056
chr2	180396289	180396348	protein_coding	Dido1	exon	ENSMUSG00000038914	ProperStrand	81	chrX	154014119	154014142	protein_coding	Mbtps2	intron	ENSMUSG00000046873	ProperStrand	7	1	-17.1925
chr8	128553472	128553519	protein_coding	Kcnk1	exon	ENSMUSG00000033998	ProperStrand	16	chr5	111121066	111121125	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	2	-14.4957
chr4	57969092	57969118	protein_coding	Txn1	utr5	ENSMUSG00000028367	ProperStrand	31	chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	1	-10.5198
chr7	86771803	86771823	SINE	ID4_	ID	chr7ID4_86771799	NonProperStrand	4	chr4	131865855	131865983	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.0048
chr8	38049667	38049683	LTR	MLT1A0	MaLR	chr8MLT1A038049422	NonProperStrand	91	chr17	34749205	34749224	protein_coding	Agpat1	exon	ENSMUSG00000034254	ProperStrand	28	1	-14.0174
chr2	26768372	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	chr7	67123712	67123728	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	4	-7.9579
chr16	90258337	90258994	protein_coding	Scaf4	exon	ENSMUSG00000022983	ProperStrand	44	chr15	5068430	5068480	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-6.6811
chr16	33625246	33646649	protein_coding	Slc12a8	exon	ENSMUSG00000035506	ProperStrand	52	chr19	42225881	42225897	protein_coding	Marveld1	utr3	ENSMUSG00000044345	NonProperStrand	112	1	-12.3490
chr4	133088675	133088703	protein_coding	Nudc	exon	ENSMUSG00000028851	ProperStrand	80	chr1	52977167	52977214	protein_coding	Hibch	utr3	ENSMUSG00000041426	ProperStrand	9	1	-16.5926
chr6	38275294	38275312	protein_coding	Zc3hav1	exon	ENSMUSG00000029826	ProperStrand	20	chr16	23110828	23110866	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.6223
chr1	63226100	63226190	protein_coding	Eef1b2	utr3	ENSMUSG00000025967	ProperStrand	106	chr19	8963048	8963128	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.3898
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	1	-8.6686
chr4	155261300	155261599	protein_coding	Cpsf3l	exon	ENSMUSG00000029034	ProperStrand	15	chr18	35716811	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.7126
chr3	130937042	130937061	protein_coding	Hadh	utr3	ENSMUSG00000027984	ProperStrand	35	chr19	8800420	8800478	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-4.5474
chr11	51410650	51410680	protein_coding	Agxt2l2	intron	ENSMUSG00000020359	NonProperStrand	8	chr8	73419697	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	4	-20.2528
chr4	141695318	141695396	protein_coding	Kazn	utr3	ENSMUSG00000040606	ProperStrand	123	chr18	35714152	35714242	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	5	-10.5268
chr1	153586258	153586338	LTR	MLT1D	MaLR	chr1MLT1D153586240	NonProperStrand	1	chr1	153585998	153586088	SINE	B2_Mm2	B2	chr1B2_Mm2153586020	ProperStrand	1	1	-inf
chr8	18691113	18691129	protein_coding	Mcph1	intron	ENSMUSG00000039842	ProperStrand	34	chr14	76247753	76247826	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-5.2673
chr17	88077661	88077677	protein_coding	Msh2	exon	ENSMUSG00000024151	ProperStrand	124	chr7	116664794	116664865	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.3974
chr12	36923597	36923655	protein_coding	Ankmy2	utr3	ENSMUSG00000036188	ProperStrand	6	chr10	23505188	23505278	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-5.3874
chr15	81110991	81111009	SINE	ID4	ID	chr15ID481110956	ProperStrand	272	chr8	88041895	88041927	protein_coding	Gpt2	exon	ENSMUSG00000031700	ProperStrand	32	1	-11.5528
chr3	96358583	96358644	SINE	B2_Mm2	B2	chr3B2_Mm296358539	NonProperStrand	2	chr3	96359881	96359908	lincRNA	Gm15441	exon	ENSMUSG00000074398	NonProperStrand	2	2	-inf
chr15	25834998	25835016	protein_coding	Fam134b	intron	ENSMUSG00000022270	NonProperStrand	9	chr16	23110909	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-5.3337
chr4	43505656	43505721	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr2	114000828	114000872	protein_coding	Aqr	exon	ENSMUSG00000040383	ProperStrand	70	1	-2.7966
chr11	62416951	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	chr19	8799855	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	7	-2.1665
chr2	83637604	83641947	protein_coding	Itgav	exon	ENSMUSG00000027087	ProperStrand	59	chr5	108336392	108336482	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	3	-11.6206
chr9	20298521	20298548	lincRNA	Gm17523	intron	ENSMUSG00000092119	ProperStrand	13	chr8	12757417	12757437	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-11.7048
chr6	4940091	4940107	protein_coding	Ppp1r9a	intron	ENSMUSG00000032827	ProperStrand	50	chr7	29073210	29073330	protein_coding	BC089491	exon	ENSMUSG00000046750	ProperStrand	62	1	-13.6174
chr14	75193845	75193914	protein_coding	Lrch1	intron	ENSMUSG00000068015	ProperStrand	14	chr9	15119649	15119739	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.3767
chr8	11401259	11402173	antisense	Gm15419	.	ENSMUSG00000084783	ProperStrand	2	chr6	83068086	83068140	protein_coding	Mogs	exon	ENSMUSG00000030036	ProperStrand	14	1	-inf
chr9	58049178	58049773	protein_coding	Islr2	utr5	ENSMUSG00000051243	ProperStrand	14	chr11	106362313	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-8.7702
mmu-miR-1949	8	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr4	116828390	116828452	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	2	-5.7496
chr18	35738069	35738089	protein_coding	Matr3	exon	ENSMUSG00000037236	ProperStrand	90	chr1	89681164	89681254	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-4.6563
chr11	119503247	119503265	protein_coding	Rptor	intron	ENSMUSG00000025583	NonProperStrand	13	chr18	33954898	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-6.4885
chr7	142891305	142891405	protein_coding	Mki67	exon	ENSMUSG00000031004	ProperStrand	286	chr1	162968462	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-3.1147
chr5	33079751	33079841	protein_coding	Pisd	utr3	ENSMUSG00000023452	ProperStrand	9	chr14	76247711	76247791	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	4	-19.6471
chr10	117135459	117135513	protein_coding	Mdm2	intron	ENSMUSG00000020184	ProperStrand	17	chr16	37384897	37384913	protein_coding	Stxbp5l	utr5	ENSMUSG00000022829	ProperStrand	332	1	-12.4469
chr8	47685167	47690492	protein_coding	Ccdc111	exon	ENSMUSG00000038225	ProperStrand	7	chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	1	-13.1859
chr8	126829606	126829623	antisense	1810008B01Rik	.	ENSMUSG00000089745	ProperStrand	10	chr16	20298238	20298266	protein_coding	Parl	exon	ENSMUSG00000033918	ProperStrand	19	1	-18.9505
chr7	134169395	134169501	protein_coding	Maz	utr5	ENSMUSG00000030678	ProperStrand	42	chr4	131865933	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	5	-11.2505
chr2	127047962	127047981	protein_coding	Snrnp200	exon	ENSMUSG00000003660	ProperStrand	203	chr19	59534008	59534025	protein_coding	Emx2	exon	ENSMUSG00000043969	NonProperStrand	87	1	-10.1221
chr9	64039369	64039420	protein_coding	Map2k1	exon	ENSMUSG00000004936	ProperStrand	36	chr1	162965570	162967519	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.2292
chr4	141026083	141026173	protein_coding	Spen	exon	ENSMUSG00000040761	ProperStrand	161	chr8	32260352	32260432	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-2.8073
chr13	19684241	19684258	protein_coding	Epdr1	utr3	ENSMUSG00000002808	ProperStrand	46	chr5	148113281	148113297	protein_coding	Cdx2	utr3	ENSMUSG00000029646	ProperStrand	276	1	-10.7898
chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	chr2	130103751	130103795	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-4.6296
chr19	4192203	4192220	protein_coding	Ppp1ca	utr5	ENSMUSG00000040385	NonProperStrand	1	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr1	33828651	33828669	protein_coding	Zfp451	intron	ENSMUSG00000042197	NonProperStrand	393	chr7	117189863	117189943	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-2.6727
chr11	116535920	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr9	41839064	41839091	protein_coding	Sorl1	exon	ENSMUSG00000049313	ProperStrand	112	2	-7.7779
chr13	30632652	30632720	protein_coding	Uqcrfs1	exon	ENSMUSG00000038462	ProperStrand	24	chr10	23505152	23505198	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.6868
chr4	131908256	131908356	lincRNA	Gm17300	exon	ENSMUSG00000091021	ProperStrand	109	chr11	101466285	101466339	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	NonProperStrand	3	1	-18.5322
chr7	140141886	140141937	protein_coding	Zranb1	exon	ENSMUSG00000030967	ProperStrand	13	chr9	120037910	120037970	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-7.7542
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	135152698	135153410	protein_coding	Trim72	exon	ENSMUSG00000042828	ProperStrand	24	1	-6.2570
chr8	27056732	27056789	protein_coding	Hgsnat	exon	ENSMUSG00000037260	ProperStrand	41	chr10	61325507	61325796	protein_coding	Col13a1	exon	ENSMUSG00000058806	ProperStrand	120	1	-12.6911
chr5	54389949	54389965	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	chr11	69483136	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-2.3362
chr4	131865855	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr10	90644840	90644903	tRNA	tRNA856-AspGTC	.	290996	ProperStrand	65	4	-6.6407
chr2	56980420	56980436	lincRNA	BB557941	exon	ENSMUSG00000084938	ProperStrand	1	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-inf
chr10	128347512	128348582	protein_coding	Cd63	exon	ENSMUSG00000025351	ProperStrand	29	chr16	23111694	23111774	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.1494
chr4	56825233	56825249	protein_coding	Ctnnal1	exon	ENSMUSG00000038816	ProperStrand	18	chr5	38691004	38691021	protein_coding	Otop1	exon	ENSMUSG00000051596	ProperStrand	1	1	-inf
chr4	43505656	43505734	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr19	5728175	5728275	protein_coding	Fam89b	utr3	ENSMUSG00000024939	ProperStrand	1	1	-inf
chr4	116826699	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	chr14	76247712	76247842	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	8	-2.7225
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr18	33954815	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	8	-7.0641
chr4	131908688	131908899	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	chr4	131866154	131866292	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	148	-1.0193
chr7	133612658	133612728	protein_coding	Sh2b1	exon	ENSMUSG00000030733	NonProperStrand	4	chr1	161270444	161270545	snoRNA	ENSMUSG00000089536_Scarna3a	.	ENSMUSG00000089536	NonProperStrand	3	3	-inf
chr11	48617709	48619154	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	chr8	32260335	32260420	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	3	-4.4927
chr1	183853750	183853767	protein_coding	Enah	exon	ENSMUSG00000022995	NonProperStrand	33	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-9.3613
chr7	130314945	130315035	protein_coding	Tnrc6a	exon	ENSMUSG00000052707	ProperStrand	37	chr16	23110910	23110991	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.7935
chr7	82922542	82922634	LTR	RLTR14-int	ERV1	chr7RLTR14-int82922508	ProperStrand	2	chr5	138608378	138608458	protein_coding	Mcm7	exon	ENSMUSG00000029730	ProperStrand	258	1	-18.1123
chr7	4433224	4433314	protein_coding	Ppp1r12c	utr3	ENSMUSG00000019254	ProperStrand	15	chr8	73419706	73419786	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-5.7918
chr9	123760677	123760693	protein_coding	Fyco1	utr5	ENSMUSG00000025241	ProperStrand	31	chr3	123210854	123210987	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.2114
chr17	24856729	24856753	antisense	Snhg9	.	ENSMUSG00000090101	ProperStrand	218	chr11	32500864	32503675	protein_coding	Stk10	exon	ENSMUSG00000020272	NonProperStrand	73	1	-10.3317
chr6	86619040	86619056	protein_coding	Mxd1	utr5	ENSMUSG00000001156	NonProperStrand	40	chr2	26323315	26323444	protein_coding	Notch1	exon	ENSMUSG00000026923	ProperStrand	145	2	-19.3827
chr16	3856858	3856879	protein_coding	Zfp174	utr3	ENSMUSG00000054939	NonProperStrand	166	chr1	88247767	88247876	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-3.1847
chr10	80860700	80860717	protein_coding	Nfic	utr3	ENSMUSG00000055053	ProperStrand	69	chr3	88497863	88497980	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-7.1817
chr17	46935888	46935978	protein_coding	BC032203	utr3	ENSMUSG00000036568	ProperStrand	64	chr17	24857740	24857820	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.1895
chr11	68067261	68067277	protein_coding	Ntn1	intron	ENSMUSG00000020902	NonProperStrand	194	chr11	97643188	97643695	protein_coding	Rpl23	utr5	ENSMUSG00000071415	ProperStrand	920	1	-5.5399
chr11	80818615	80818695	protein_coding	Accn1	intron	ENSMUSG00000020704	ProperStrand	69	chr1	9930694	9930784	protein_coding	6030422M02Rik	utr3	ENSMUSG00000046101	NonProperStrand	2	1	-inf
chr12	111931619	111931927	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr1	88252837	88252879	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-1.9608
chr12	64390826	64390916	LTR	IAPLTR2_Mm	ERVK	chr12IAPLTR2_Mm64390534	ProperStrand	1	chr11	55006141	55006231	antisense	4921508A21Rik	.	ENSMUSG00000084980	NonProperStrand	1	1	-inf
chr12	113976876	113976966	protein_coding	AW555464	exon	ENSMUSG00000072825	ProperStrand	96	chr7	118219574	118219606	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-3.2980
chr18	10052132	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr8	60567299	60567316	protein_coding	Galntl6	intron	ENSMUSG00000061864	NonProperStrand	25	1	-10.5689
chr17	35822057	35822257	protein_coding	Ddr1	exon	ENSMUSG00000003534	ProperStrand	129	chr17	66465350	66465366	protein_coding	ORF19	exon	ENSMUSG00000024101	NonProperStrand	3	1	-18.7202
chr15	79359991	79363825	protein_coding	Ddx17	intron	ENSMUSG00000055065	ProperStrand	140	chr7	116663666	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-2.3127
chr11	97950802	97950854	protein_coding	Fbxl20	utr3	ENSMUSG00000020883	ProperStrand	23	chr13	38243279	38243369	protein_coding	Dsp	utr5	ENSMUSG00000054889	ProperStrand	23	1	-17.0137
chr18	80403573	80403589	protein_coding	Txnl4a	utr5	ENSMUSG00000057130	ProperStrand	44	chr14	76247754	76247778	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-4.7655
chr12	33638595	33638614	lincRNA	4933406C10Rik	exon	ENSMUSG00000086543	ProperStrand	52	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.5385
chr7	52309977	52309993	protein_coding	Prrg2	exon	ENSMUSG00000007837	NonProperStrand	281	chr5	115939536	115939587	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-4.8328
chr3	19083951	19084031	LTR	MLT1F2	MaLR	chr3MLT1F219083937	NonProperStrand	1	chr3	19084490	19084580	SINE	B4A	B4	chr3B4A19084484	ProperStrand	1	1	-inf
chr2	179911694	179911835	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr19	46022236	46022252	protein_coding	9130011E15Rik	intron	ENSMUSG00000039901	ProperStrand	129	1	-8.1649
chr2	90235291	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr13	54848608	54848624	protein_coding	Gprin1	intron	ENSMUSG00000069227	ProperStrand	55	1	-4.6294
chr9	64143848	64143877	protein_coding	Tipin	intron	ENSMUSG00000032397	ProperStrand	32	chr3	67161283	67161299	protein_coding	Rsrc1	utr3	ENSMUSG00000034544	NonProperStrand	71	1	-14.2467
chr5	111105664	111185360	protein_coding	Ep400	exon	ENSMUSG00000029505	ProperStrand	176	chr17	24857718	24857849	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	3	-2.6027
chr15	81782413	81783188	protein_coding	Pmm1	exon	ENSMUSG00000022474	ProperStrand	24	chr10	23505168	23505248	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.6868
chr19	4922384	4923082	protein_coding	Dpp3	exon	ENSMUSG00000063904	ProperStrand	36	chr9	15119649	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-8.8622
chr11	68067261	68067277	protein_coding	Ntn1	intron	ENSMUSG00000020902	NonProperStrand	194	chr8	129468837	129468882	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-2.2944
chr17	35277894	35278416	protein_coding	Bag6	exon	ENSMUSG00000024392	ProperStrand	181	chr4	120225612	120226561	protein_coding	Ctps	exon	ENSMUSG00000028633	NonProperStrand	24	1	-12.9548
chr15	82685124	82725638	protein_coding	Tcf20	exon	ENSMUSG00000041852	ProperStrand	658	chr7	29136525	29136651	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	6	-1.0904
chr14	45949538	45949554	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	chr1	88252836	88252887	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-3.3940
chr10	76225039	76225055	protein_coding	Pcbp3	utr3	ENSMUSG00000001120	NonProperStrand	10	chr7	53698748	53698871	protein_coding	Sergef	exon	ENSMUSG00000030839	ProperStrand	7	1	-inf
chr17	85116023	85116043	protein_coding	Lrpprc	exon	ENSMUSG00000024120	ProperStrand	98	chrX	74792316	74792364	protein_coding	Tbl1x	intron	ENSMUSG00000025246	ProperStrand	56	2	-18.8288
chr12	31275333	31275349	protein_coding	Tmem18	utr3	ENSMUSG00000043061	NonProperStrand	3	chr17	24857748	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-14.1521
chr15	76005537	76006562	protein_coding	Plec	exon	ENSMUSG00000022565	ProperStrand	186	chr2	26494760	26494840	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-2.4373
chr7	19935606	19936050	protein_coding	Ercc1	exon	ENSMUSG00000003549	NonProperStrand	35	chr12	109793418	109793493	protein_coding	Evl	intron	ENSMUSG00000021262	ProperStrand	9	1	-18.0131
chr4	63211298	63211314	protein_coding	Atp6v1g1	utr3	ENSMUSG00000039105	NonProperStrand	24	chr2	130102054	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-7.1746
chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	chr19	9082715	9082815	protein_coding	Ahnak	exon	ENSMUSG00000069833	ProperStrand	103	12	-19.9046
chr2	93325335	93325425	SINE	B3	B2	chr2B393325358	ProperStrand	1	chr7	85258323	85258413	SINE	B4A	B4	chr7B4A85258314	ProperStrand	1	1	-inf
chr6	101485357	101485378	LTR	MTEa	MaLR	chr6MTEa101485361	ProperStrand	45	chr11	76035320	76035402	protein_coding	Glod4	utr3	ENSMUSG00000017286	ProperStrand	23	1	-15.8211
chr2	172825858	172825875	protein_coding	Rae1	utr5	ENSMUSG00000027509	NonProperStrand	44	chr7	116664849	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.0957
chr2	167836655	167836680	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	chr8	73419716	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-3.7997
chr12	111891546	111891626	protein_coding	Dync1h1	intron	ENSMUSG00000018707	ProperStrand	648	chr17	45704949	45705039	protein_coding	Hsp90ab1	utr3	ENSMUSG00000023944	ProperStrand	1627	4	-8.3228
chr2	167641865	167641884	Simple_repeat	(CA)n	Simple_repeat	chr2(CA)n167641840	NonProperStrand	1	chr4	131908360	131908453	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-inf
chr11	118900007	118900023	protein_coding	Cbx8	exon	ENSMUSG00000025578	ProperStrand	95	chr3	108357269	108357359	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	2	-6.2187
chr9	72862670	72862770	protein_coding	Pigb	utr3	ENSMUSG00000032203	ProperStrand	2	chr14	65372841	65372889	snoRNA	ENSMUSG00000064442_SNORA36	.	ENSMUSG00000064442	ProperStrand	296	1	-17.5300
chr2	126533174	126533193	protein_coding	Usp8	utr5	ENSMUSG00000027363	ProperStrand	40	chr16	23111728	23111753	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.5776
chr14	76247731	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	chr2	91436229	91436336	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	7	-3.6924
chr2	26493391	26493518	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr11	32113274	32113291	protein_coding	Rhbdf1	exon	ENSMUSG00000020282	ProperStrand	23	1	-8.1130
chr17	71601884	71601901	lincRNA	Gm16724	intron	ENSMUSG00000085916	ProperStrand	13	chr10	80809668	80809684	protein_coding	Hmg20b	exon	ENSMUSG00000020232	ProperStrand	157	1	-14.5070
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr17	35803090	35803106	protein_coding	Vars2	exon	ENSMUSG00000038838	ProperStrand	19	1	-8.2060
chr8	72861484	72862122	protein_coding	Upf1	exon	ENSMUSG00000058301	ProperStrand	90	chrX	34622922	34623012	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-2.4590
chr17	32259134	32259219	protein_coding	Notch3	exon	ENSMUSG00000038146	ProperStrand	181	chr1	162968213	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-4.6609
chr7	135685704	135689141	protein_coding	Bag3	exon	ENSMUSG00000030847	ProperStrand	35	chr15	79908951	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-6.5364
chr14	77587118	77587136	protein_coding	Enox1	intron	ENSMUSG00000022012	NonProperStrand	15	chr5	135096599	135096664	protein_coding	Eif4h	utr3	ENSMUSG00000040731	ProperStrand	46	1	-16.7407
chr15	76736643	76736663	protein_coding	Rpl8	exon	ENSMUSG00000003970	ProperStrand	191	chr11	82692475	82692491	protein_coding	Rad51l3	exon	ENSMUSG00000018841	ProperStrand	112	1	-9.7378
chr13	53440707	53440761	protein_coding	Sptlc1	intron	ENSMUSG00000021468	ProperStrand	33	chr16	23110911	23110962	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.9284
chr3	85941936	85942026	protein_coding	Rps3a	exon	ENSMUSG00000028081	ProperStrand	177	chr7	29136545	29136625	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-0.8012
chr5	138227183	138227216	protein_coding	Mepce	exon	ENSMUSG00000029726	ProperStrand	18	chr15	98350146	98350255	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	3	-16.2568
chr17	35280494	35280540	protein_coding	Bag6	exon	ENSMUSG00000024392	ProperStrand	181	chr2	158185530	158185568	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-4.3419
chr2	166395934	166395952	protein_coding	Prex1	exon	ENSMUSG00000039621	ProperStrand	20	chr18	33954850	33954950	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	3	-13.1948
chr4	151707230	151707320	protein_coding	Rpl22	utr3	ENSMUSG00000028936	ProperStrand	112	chr15	82980111	82980192	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-5.9065
chr5	111206693	111208750	protein_coding	Pus1	exon	ENSMUSG00000029507	ProperStrand	10	chr2	145076804	145209255	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	3	-inf
chr2	26766578	26768572	protein_coding	Rpl7a	exon	ENSMUSG00000062647	ProperStrand	234	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	9	-0.7052
chr4	56771891	56772716	protein_coding	Ikbkap	exon	ENSMUSG00000028431	ProperStrand	44	chr18	35716832	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.6971
chrX	147476948	147476965	SINE	RSINE1	B4	chrXRSINE1147476844	NonProperStrand	20	chr15	102189609	102189627	protein_coding	Sp7	exon	ENSMUSG00000060284	ProperStrand	2	1	-inf
chr12	112779147	112779231	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	chr11	116938645	116938735	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	7	-2.0471
chr14	76906724	76906758	protein_coding	Tsc22d1	utr3	ENSMUSG00000022010	ProperStrand	86	chr7	116664841	116664924	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.9511
chr2	130103751	130103808	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	chr10	90581034	90581124	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	7	-8.6499
chr2	179669789	179669848	protein_coding	Taf4a	exon	ENSMUSG00000039117	ProperStrand	15	chr7	54196535	54196551	protein_coding	Uevld	intron	ENSMUSG00000043262	NonProperStrand	1	1	-inf
chr15	79908929	79909020	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	chr5	130300436	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	29	-1.9093
chr7	117166748	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	chr6	124665422	124665522	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	3	-0.8807
chr9	40611952	40611989	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr11	102146957	102147009	protein_coding	Tmub2	utr5	ENSMUSG00000034757	ProperStrand	9	1	-12.0202
chr7	24779190	24779213	SINE	ID_B1	B4	chr7ID_B124779183	NonProperStrand	54	chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	1	-8.8043
chr10	126959346	126959409	protein_coding	Shmt2	utr5	ENSMUSG00000025403	ProperStrand	94	chr15	72968537	72976813	protein_coding	Eif2c2	exon	ENSMUSG00000036698	ProperStrand	154	1	-10.5195
chr17	24858017	24858052	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr6	125136421	125136467	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	3	-7.5595
chr2	121361246	121361274	protein_coding	Wdr76	exon	ENSMUSG00000027242	ProperStrand	25	chr7	117166761	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-6.5392
chr4	131865316	131865544	lincRNA	Snhg12	intron	ENSMUSG00000086290	ProperStrand	178	chr4	131865393	131865516	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	16	-20.1628
chr10	77520040	77520130	protein_coding	Dnmt3l	exon	ENSMUSG00000000730	ProperStrand	37	chrX	147521073	147521153	protein_coding	Fgd1	exon	ENSMUSG00000025265	ProperStrand	96	4	-19.7624
chr17	6232006	6232022	protein_coding	Tulp4	exon	ENSMUSG00000034377	NonProperStrand	265	chr2	130103782	130103803	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-5.5348
chr17	13135978	13136068	protein_coding	Acat2	utr3	ENSMUSG00000023832	ProperStrand	8	chr9	15119646	15119726	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-6.5261
chr7	13516174	13516197	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr4	122970393	122970466	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-2.9681
chr9	58070866	58070966	protein_coding	Pml	intron	ENSMUSG00000036986	ProperStrand	45	chr5	130300477	130300551	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-5.2198
chr14	121864130	121864220	protein_coding	Slc15a1	exon	ENSMUSG00000025557	ProperStrand	14	chr8	26629296	26629386	protein_coding	Fgfr1	utr5	ENSMUSG00000091895	ProperStrand	16	1	-19.1867
chr7	117058263	117058343	protein_coding	Dennd5a	exon	ENSMUSG00000035901	ProperStrand	22	chr8	73419673	73419763	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-8.3362
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr9	59526637	59526661	protein_coding	Pkm2	utr3	ENSMUSG00000032294	ProperStrand	1296	1	-2.6945
chr18	73799863	73799918	protein_coding	Smad4	utr3	ENSMUSG00000024515	ProperStrand	51	chr7	134671426	134671519	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	3	-18.2086
chr10	58680228	58680328	protein_coding	Sept10	intron	ENSMUSG00000019917	ProperStrand	34	chr16	23110509	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.4743
chr14	52852273	52852305	protein_coding	Chd8	exon	ENSMUSG00000053754	ProperStrand	167	chr9	15118323	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-3.1644
chr4	116313701	116314506	protein_coding	Akr1a1	exon	ENSMUSG00000028692	ProperStrand	35	chr11	55296195	55296274	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	7	-inf
chr11	100182126	100182169	protein_coding	Eif1	intron	ENSMUSG00000035530	ProperStrand	115	chr17	13112491	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-3.3616
chr11	113518408	113518699	protein_coding	Cog1	exon	ENSMUSG00000018661	ProperStrand	51	chr16	23111453	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.4898
chr2	91400979	91402921	protein_coding	Ckap5	exon	ENSMUSG00000040549	ProperStrand	53	chr19	8799063	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-6.0768
chr18	57400307	57400324	protein_coding	Megf10	exon	ENSMUSG00000024593	ProperStrand	143	chr5	115722272	115722367	protein_coding	Rnf10	exon	ENSMUSG00000041740	ProperStrand	95	1	-10.6464
chr7	52085521	52085612	protein_coding	Nup62	utr3	ENSMUSG00000043858	ProperStrand	47	chr7	29136556	29136636	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.7863
chr2	121176333	121176349	protein_coding	Ppip5k1	exon	ENSMUSG00000033526	ProperStrand	85	chr7	119932174	119932207	protein_coding	Tead1	intron	ENSMUSG00000055320	ProperStrand	217	1	-10.0354
chr1	109708812	109708902	LTR	ORR1A4-int	MaLR	chr1ORR1A4-int109708753	ProperStrand	1	chr1	109708461	109708541	LTR	RMER13B	ERVK	chr1RMER13B109708218	ProperStrand	1	1	-inf
chr10	5991427	5991507	protein_coding	Akap12	exon	ENSMUSG00000038587	ProperStrand	1008	chr4	116827120	116827186	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	2	-3.3128
chr3	144260257	144260273	protein_coding	Sep15	utr3	ENSMUSG00000037072	ProperStrand	19	chr10	23505151	23505282	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-5.4097
chr3	52799969	52802190	protein_coding	Cog6	exon	ENSMUSG00000027742	ProperStrand	5	chr4	131908266	131908347	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-10.1894
chr15	81937523	81937539	protein_coding	Mei1	exon	ENSMUSG00000068117	ProperStrand	53	chr19	8963097	8963178	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.4846
chr8	109184843	109184890	protein_coding	Cdh1	exon	ENSMUSG00000000303	ProperStrand	283	chr19	44188458	44188548	snoRNA	ENSMUSG00000077391_SNORA12	.	ENSMUSG00000077391	ProperStrand	506	1	-5.9679
chr11	75764794	75764825	SINE	B1_Mur4	Alu	chr11B1_Mur475764734	ProperStrand	1	chr15	98350202	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-inf
chr6	6064304	6065035	protein_coding	Slc25a13	exon	ENSMUSG00000015112	ProperStrand	78	chr2	181113588	181114341	protein_coding	Zgpat	exon	ENSMUSG00000027582	ProperStrand	10	5	-21.4390
chr2	84888359	84888376	protein_coding	Tnks1bp1	intron	ENSMUSG00000033955	ProperStrand	23	chr2	146125208	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	1	-13.0097
chr9	44598075	44598093	protein_coding	Ift46	intron	ENSMUSG00000002031	NonProperStrand	28	chr9	30984718	30985577	protein_coding	Aplp2	exon	ENSMUSG00000031996	ProperStrand	172	1	-12.7409
chr5	130339010	130339060	protein_coding	Sumf2	utr3	ENSMUSG00000025538	ProperStrand	20	chr17	35299545	35299640	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	2	-11.2430
chr2	169935728	169935744	protein_coding	Zfp217	utr3	ENSMUSG00000052056	ProperStrand	79	chr5	137895304	137895432	protein_coding	Zan	exon	ENSMUSG00000079173	ProperStrand	7	1	-17.2423
chr8	98249958	98250048	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	chr7	87495694	87495738	protein_coding	Man2a2	utr3	ENSMUSG00000038886	ProperStrand	18	4	-19.5248
chr17	56839772	56849522	protein_coding	Ranbp3	intron	ENSMUSG00000002372	ProperStrand	34	chr10	23505149	23505279	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	11	-19.8448
chr5	34898647	34899541	protein_coding	Sh3bp2	exon	ENSMUSG00000054520	NonProperStrand	2	chr9	64143745	64143784	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-15.2418
chr3	35980790	35981061	protein_coding	Acad9	exon	ENSMUSG00000027710	ProperStrand	11	chr2	109811567	109811612	protein_coding	Lgr4	intron	ENSMUSG00000050199	ProperStrand	27	3	-19.5836
chr7	29735957	29735996	protein_coding	Actn4	intron	ENSMUSG00000054808	ProperStrand	120	chr4	131866238	131866283	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-2.4301
chr10	65454096	65454114	LTR	MER74A	ERVL	chr10MER74A65454017	NonProperStrand	1	chr12	41464082	41464099	protein_coding	Dock4	exon	ENSMUSG00000035954	ProperStrand	41	1	-inf
chr5	31556218	31556308	protein_coding	Ift172	exon	ENSMUSG00000038564	ProperStrand	28	chr4	131865856	131865936	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.0580
chr5	100855902	100855941	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr11	88798338	88802669	protein_coding	Scpep1	exon	ENSMUSG00000000278	ProperStrand	54	1	-6.8470
chr19	20705208	20705224	protein_coding	Aldh1a1	exon	ENSMUSG00000053279	NonProperStrand	2	chr2	26494789	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-10.3719
chrX	7458595	7458685	protein_coding	Pim2	exon	ENSMUSG00000031155	ProperStrand	5	chr17	24857750	24857830	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-7.1522
chr2	167836657	167836680	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	chr2	86138158	86138174	protein_coding	Olfr1052	exon	ENSMUSG00000047149	NonProperStrand	119	1	-10.7574
chr6	124655593	124655767	protein_coding	Emg1	exon	ENSMUSG00000004268	ProperStrand	12	chr4	131908728	131908808	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-17.3363
chr12	56404814	56404830	protein_coding	1110008L16Rik	utr5	ENSMUSG00000021023	NonProperStrand	10	chr11	106362638	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-11.0566
chr4	48570024	48570054	protein_coding	5730528L13Rik	intron	ENSMUSG00000039693	ProperStrand	3	chr10	110918549	110918639	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-9.6547
chr5	45253818	45253834	LTR	MLT1D	MaLR	chr5MLT1D45253615	ProperStrand	26	chr5	111082719	111082735	protein_coding	Ddx51	exon	ENSMUSG00000029504	ProperStrand	54	1	-15.2208
chr1	66521957	66521973	protein_coding	Unc80	intron	ENSMUSG00000055567	NonProperStrand	212	chr1	162965994	162966032	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-1.4772
chr15	36700777	36700844	protein_coding	Ywhaz	utr3	ENSMUSG00000022285	ProperStrand	73	chr3	123210854	123210870	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.7553
chr3	94402926	94402944	LTR	RMER19C	ERVK	chr3RMER19C94402647	ProperStrand	1	chr8	83388701	83388746	protein_coding	Gab1	intron	ENSMUSG00000031714	NonProperStrand	8	1	-inf
chr8	109128272	109193095	protein_coding	Cdh1	exon	ENSMUSG00000000303	ProperStrand	283	chr7	118219574	118219740	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	5	-8.0873
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr8	129468746	129468831	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	3	-2.7322
chr2	113553316	113553406	protein_coding	Fmn1	utr3	ENSMUSG00000044042	ProperStrand	17	chr7	148634720	148634800	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-6.4539
chr10	75742603	75742629	protein_coding	Dip2a	exon	ENSMUSG00000020231	ProperStrand	25	chr7	116664809	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	4	-13.5862
chr13	37522304	37522320	LINE	L1MD2	L1	chr13L1MD237521918	ProperStrand	9	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.2544
chr8	46098117	46098134	protein_coding	Fat1	intron	ENSMUSG00000070047	ProperStrand	306	chr4	122970424	122970524	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	NonProperStrand	6	1	-14.8014
chr14	55476645	55476661	protein_coding	Homez	exon	ENSMUSG00000057156	NonProperStrand	127	chr2	26494775	26494824	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.8377
chr6	143146030	143146079	protein_coding	Etnk1	exon	ENSMUSG00000030275	ProperStrand	61	chr3	123210853	123210933	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	5	-10.1217
chr19	5801191	5801269	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr6	124665325	124665415	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	1	-1.6342
chr17	43781453	43781484	protein_coding	Slc25a27	intron	ENSMUSG00000023912	ProperStrand	5	chr11	62418036	62418085	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	3	-19.3692
chr12	78168284	78168301	SINE	B4A	B4	chr12B4A78168283	NonProperStrand	7	chr9	120040168	120040220	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	1	-13.9533
chr4	52434444	52434534	LTR	ORR1A1-int	MaLR	chr4ORR1A1-int52433494	NonProperStrand	1	chr4	52434704	52434784	LTR	ORR1A1	MaLR	chr4ORR1A152434721	NonProperStrand	1	1	-inf
chr4	117908590	117908674	protein_coding	Ptprf	exon	ENSMUSG00000033295	ProperStrand	337	chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	2	-8.7628
chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	chr13	54781613	54781704	protein_coding	Rnf44	utr3	ENSMUSG00000034928	ProperStrand	90	1	-8.2534
chr17	10684328	10684344	antisense	A230009B12Rik	.	ENSMUSG00000089633	ProperStrand	4	chr8	74843635	74843778	protein_coding	Klf2	exon	ENSMUSG00000055148	ProperStrand	82	1	-18.1495
chr2	69305047	69305140	protein_coding	Lrp2	exon	ENSMUSG00000027070	ProperStrand	35	chr2	26494708	26494739	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	3	-10.0169
chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	chr11	97642952	97643036	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-3.7214
chr2	171796167	171796186	LTR	RMER15	ERVL	chr2RMER15171796041	NonProperStrand	1	chr4	46554810	46554826	protein_coding	Coro2a	exon	ENSMUSG00000028337	NonProperStrand	24	1	-inf
chrX	11549500	11549580	SINE	B3A	B2	chrXB3A11549410	ProperStrand	1	chrX	11549662	11549752	SINE	B4A	B4	chrXB4A11549674	ProperStrand	1	1	-inf
chr10	79441161	79441178	protein_coding	ORF61	exon	ENSMUSG00000013858	NonProperStrand	13	chr16	58732103	58732121	protein_coding	Cldn25	intron	ENSMUSG00000022744	ProperStrand	4	1	-20.8300
chr5	118053133	118053150	protein_coding	Ksr2	intron	ENSMUSG00000061578	ProperStrand	36	chr3	123210929	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.9411
chr9	31678014	31678094	protein_coding	Barx2	intron	ENSMUSG00000032033	NonProperStrand	4	chr12	117840054	117840144	protein_coding	Ptprn2	intron	ENSMUSG00000056553	ProperStrand	13	1	-19.7889
chr2	90235298	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	46114829	46114846	protein_coding	Fat1	exon	ENSMUSG00000070047	NonProperStrand	5	1	-9.5409
chr17	21862635	21862652	LTR	RLTR9A	ERVK	chr17RLTR9A21862625	NonProperStrand	3	chr11	6428090	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-9.3720
chr1	108617870	108617886	protein_coding	Kdsr	utr3	ENSMUSG00000009905	ProperStrand	17	chr16	23111705	23111760	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.1536
chr5	23889151	23889167	antisense	Gm15587	.	ENSMUSG00000086769	ProperStrand	3	chr1	46078109	46078129	protein_coding	Gm4776	utr3	ENSMUSG00000044457	NonProperStrand	24	1	-inf
chr17	34168064	34168082	protein_coding	Slc39a7	exon	ENSMUSG00000024327	NonProperStrand	2	chr1	88253584	88253673	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	1	-14.8117
chr14	28192895	28197357	protein_coding	Arhgef3	exon	ENSMUSG00000021895	ProperStrand	4	chr10	23505160	23505250	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-6.2798
chr10	77458012	77472391	protein_coding	Pfkl	exon	ENSMUSG00000020277	ProperStrand	179	chr11	68886929	68887043	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	2	-3.9117
chr19	6336742	6336832	protein_coding	Men1	exon	ENSMUSG00000024947	ProperStrand	24	chr18	83156428	83156508	protein_coding	Zfp516	exon	ENSMUSG00000058881	ProperStrand	25	1	-16.8481
chr5	123175556	123175585	protein_coding	P2rx4	intron	ENSMUSG00000029470	ProperStrand	16	chr9	59513756	59516412	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	1	-9.8503
chr2	90235309	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr3	104764495	104764511	protein_coding	Wnt2b	utr5	ENSMUSG00000027840	NonProperStrand	50	3	-11.4284
chr16	85802546	85802564	protein_coding	Adamts1	exon	ENSMUSG00000022893	ProperStrand	102	chr19	28606078	28606094	protein_coding	Glis3	exon	ENSMUSG00000052942	NonProperStrand	14	1	-15.2235
chr1	135556080	135556168	protein_coding	Zc3h11a	intron	ENSMUSG00000026464	ProperStrand	102	chr19	8800375	8800465	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-2.5822
chr6	65067728	65067744	protein_coding	Hpgds	utr3	ENSMUSG00000029919	NonProperStrand	3	chr11	88579437	88579466	protein_coding	Msi2	utr5	ENSMUSG00000069769	ProperStrand	159	1	-17.8426
chr9	110845048	110845120	protein_coding	Tdgf1	exon	ENSMUSG00000032494	ProperStrand	218	chr10	44039277	44039347	protein_coding	Atg5	exon	ENSMUSG00000038160	ProperStrand	12	4	-inf
chr5	114699558	114699578	protein_coding	Acacb	exon	ENSMUSG00000042010	ProperStrand	7	chr11	69483190	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-6.6014
chr11	121405176	121405234	protein_coding	Tbcd	intron	ENSMUSG00000039230	ProperStrand	34	chr17	24857719	24857809	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	4	-11.2718
chr12	17552958	17552987	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr13	21360337	21360371	tRNA	tRNA995-GlnTTG	.	4185	ProperStrand	3	1	-11.3965
chr4	99634169	99634218	protein_coding	Pgm2	exon	ENSMUSG00000025791	ProperStrand	43	chr8	113579134	113579224	protein_coding	Aars	utr3	ENSMUSG00000031960	ProperStrand	355	1	-10.4228
chr2	32818806	32818888	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	chr11	58115972	58116006	tRNA	tRNA1911-LeuCAA	.	644350	ProperStrand	165	1	-3.5464
chr9	20947567	20947632	protein_coding	Cdc37	exon	ENSMUSG00000019471	ProperStrand	97	chr7	117190025	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-4.3768
chr6	91023269	91023293	protein_coding	Nup210	exon	ENSMUSG00000030091	ProperStrand	140	chr7	148634702	148634792	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	7	-17.0522
chr4	131399490	131399506	protein_coding	Mecr	exon	ENSMUSG00000028910	NonProperStrand	109	chr4	131866155	131866292	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	4	-9.2452
chr10	80640905	80641431	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr6	125112694	125112883	protein_coding	Gapdh	exon	ENSMUSG00000057666	ProperStrand	356	1	-2.7464
chr5	68895474	68895554	LTR	MTA_Mm	MaLR	chr5MTA_Mm68895201	NonProperStrand	1	chr16	46015421	46015511	Simple_repeat	(TTCTCC)n	Simple_repeat	chr16(TTCTCC)n46015435	ProperStrand	1	1	-inf
chr11	72563613	72563670	protein_coding	Ankfy1	exon	ENSMUSG00000020790	ProperStrand	68	chr11	4793990	4794076	protein_coding	Nipsnap1	utr3	ENSMUSG00000034285	ProperStrand	15	2	-inf
chr1	134963368	134963453	protein_coding	Pik3c2b	exon	ENSMUSG00000026447	ProperStrand	24	chr16	23110985	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-5.9609
chr6	84079525	84080166	protein_coding	Dysf	exon	ENSMUSG00000033788	ProperStrand	26	chr2	26493404	26493484	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	20	-24.6184
chr13	55750535	55750625	protein_coding	Ddx46	intron	ENSMUSG00000021500	NonProperStrand	3	chr13	55624816	55624906	protein_coding	Dok3	exon	ENSMUSG00000035711	ProperStrand	5	1	-inf
chr11	69483772	69484161	protein_coding	Eif4a1	exon	ENSMUSG00000059796	ProperStrand	108	chr2	91436236	91436336	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-6.3323
chr11	101429737	101429806	protein_coding	Nbr1	exon	ENSMUSG00000017119	ProperStrand	91	chr11	97642952	97643014	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.7912
chr5	89383967	89457318	protein_coding	Slc4a4	exon	ENSMUSG00000060961	NonProperStrand	195	chr15	98350210	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-2.5935
chr7	130114247	130144920	protein_coding	Rbbp6	utr5	ENSMUSG00000030779	ProperStrand	46	chr16	23110828	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-3.2276
chr7	132719257	132719337	protein_coding	Il4ra	exon	ENSMUSG00000030748	ProperStrand	3	chr7	87235685	87235775	protein_coding	Zfp710	utr3	ENSMUSG00000048897	ProperStrand	229	1	-17.1159
chr5	121655016	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	chr12	88778627	88778742	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	10	-2.1778
chr14	12974759	12974778	protein_coding	Ptprg	intron	ENSMUSG00000021745	ProperStrand	72	chr19	39042355	39042381	protein_coding	Hells	utr3	ENSMUSG00000025001	ProperStrand	23	1	-14.8801
chr11	115359426	115359457	protein_coding	Hn1	utr3	ENSMUSG00000020737	ProperStrand	18	chr10	39978338	39978428	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	6	-19.8539
chr10	80777858	80780572	protein_coding	Pip5k1c	utr3	ENSMUSG00000034902	ProperStrand	26	chr2	166890837	166890856	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	1	-12.0733
mmu-miR-1291	0	26	miRNA	mmu-miR-1291	.	mmu-miR-1291	ProperStrand	103	chr15	83408273	83408302	protein_coding	Ttll12	exon	ENSMUSG00000016757	ProperStrand	36	1	-13.2619
chr1	181027187	181027205	protein_coding	Smyd3	intron	ENSMUSG00000055067	ProperStrand	231	chr4	46508025	46508113	snoRNA	ENSMUSG00000064410_SNORA36	.	ENSMUSG00000064410	ProperStrand	133	1	-9.0147
chr14	96988089	96988179	snoRNA	ENSMUSG00000064581_SNORA30	.	ENSMUSG00000064581	ProperStrand	146	chr10	39978361	39978441	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-3.7615
chrX	71200067	71200693	protein_coding	Hcfc1	exon	ENSMUSG00000031386	ProperStrand	424	chr16	23111705	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	7	-2.1690
chr11	49628812	49628835	protein_coding	Gfpt2	exon	ENSMUSG00000020363	ProperStrand	11	chrX	93136011	93136027	protein_coding	Las1l	exon	ENSMUSG00000057421	ProperStrand	248	1	-13.9294
chrX	45380685	45380729	protein_coding	Apln	utr3	ENSMUSG00000037010	ProperStrand	4	chr8	98270005	98270095	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	3	-20.3072
chr13	58510640	58510683	protein_coding	Rmi1	exon	ENSMUSG00000035367	ProperStrand	23	chr10	90581034	90581147	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	4	-18.8893
chr8	98272835	98272915	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	chr2	130102051	130102107	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	5	-10.8703
chr4	120726869	120726886	protein_coding	Col9a2	exon	ENSMUSG00000028626	ProperStrand	35	chr4	131908382	131908415	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-4.0554
chr4	131865854	131865944	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	NonProperStrand	39	chr18	35714206	35714286	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	NonProperStrand	47	3	-20.7525
chr5	115119559	115119636	protein_coding	Gltp	utr3	ENSMUSG00000011884	ProperStrand	10	chr4	120225612	120226561	protein_coding	Ctps	exon	ENSMUSG00000028633	NonProperStrand	24	1	-19.3824
chr2	130100412	130100428	protein_coding	Nop56	exon	ENSMUSG00000027405	ProperStrand	125	chr5	108334195	108334319	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-3.4382
chr17	35653338	35653354	protein_coding	Tcf19	utr5	ENSMUSG00000050410	ProperStrand	10	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.0395
chr15	102821152	102821169	protein_coding	Hoxc8	utr5	ENSMUSG00000001657	NonProperStrand	1	chr16	23110964	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr9	53208506	53208545	protein_coding	Kdelc2	utr3	ENSMUSG00000034487	NonProperStrand	2	chr16	23111776	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-inf
chr19	4289363	4289408	protein_coding	Adrbk1	exon	ENSMUSG00000024858	ProperStrand	37	chrX	34622906	34623012	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	7	-19.8323
chr11	50199441	50199498	protein_coding	Hnrnph1	utr3	ENSMUSG00000007850	ProperStrand	49	chr11	55296283	55296334	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-6.5808
chr19	29666464	29678596	protein_coding	C030046E11Rik	intron	ENSMUSG00000038658	ProperStrand	104	chr16	23110828	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-0.8557
chr8	111238941	111238958	protein_coding	Zfhx3	utr5	ENSMUSG00000038872	ProperStrand	65	chr9	39358287	39358304	protein_coding	Olfr958	exon	ENSMUSG00000050853	NonProperStrand	266	1	-10.1673
chr6	86682984	86683074	protein_coding	Gmcl1	exon	ENSMUSG00000001157	ProperStrand	17	chr5	130300473	130300553	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-8.0941
chr11	96803837	96805049	protein_coding	Pnpo	exon	ENSMUSG00000018659	ProperStrand	7	chr6	115758011	115758049	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-9.8502
chr4	46508044	46508134	snoRNA	ENSMUSG00000064410_SNORA36	.	ENSMUSG00000064410	ProperStrand	133	chr14	76247740	76247820	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-2.7196
chr2	25301844	25302026	protein_coding	Abca2	exon	ENSMUSG00000026944	ProperStrand	57	chr10	107800733	107800813	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	1	-8.1732
chr17	47115428	47115466	protein_coding	Ubr2	intron	ENSMUSG00000023977	ProperStrand	172	chr10	110918656	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-3.0680
chr5	124895601	124895691	protein_coding	Setd8	exon	ENSMUSG00000049327	ProperStrand	71	chr17	24857722	24857802	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.0200
chr19	40398552	40398585	protein_coding	Sorbs1	intron	ENSMUSG00000025006	ProperStrand	25	chr10	23505190	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.6150
chr2	154689595	154692835	protein_coding	Raly	exon	ENSMUSG00000027593	ProperStrand	116	chr4	131865856	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	10	-15.1906
chr12	86662989	86663005	protein_coding	Nek9	exon	ENSMUSG00000034290	NonProperStrand	2	chr7	29136525	29136580	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-9.5181
chr11	99885311	99885327	protein_coding	Krt33b	exon	ENSMUSG00000057723	NonProperStrand	352	chr18	35714144	35714264	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-0.7197
chr9	15118322	15118412	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	chr4	116828379	116828457	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-4.8407
chr5	65808076	65808286	protein_coding	Ugdh	exon	ENSMUSG00000029201	ProperStrand	14	chr7	150717298	150717320	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	4	-inf
chr13	98264561	98264637	lincRNA	Gm11019	exon	ENSMUSG00000078952	ProperStrand	113	chr7	27972259	27972305	protein_coding	Snrpa	exon	ENSMUSG00000061479	ProperStrand	56	1	-12.1813
chr10	79442350	79442440	protein_coding	ORF61	exon	ENSMUSG00000013858	ProperStrand	71	chr16	23110455	23110475	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.1793
chr2	32818804	32818941	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	chr14	76247724	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	10	-0.9651
chr5	23825941	23825957	protein_coding	Kcnh2	exon	ENSMUSG00000038319	ProperStrand	242	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-4.9980
chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	chr9	120039533	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	4	-3.0858
chr2	25312429	25313191	protein_coding	Clic3	exon	ENSMUSG00000015093	ProperStrand	79	chr8	88466091	88466151	protein_coding	Phkb	utr5	ENSMUSG00000036879	ProperStrand	25	1	-14.5273
chr6	27755977	27755996	protein_coding	Grm8	intron	ENSMUSG00000024211	ProperStrand	15	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-13.2506
chr13	69762160	69765917	protein_coding	Nsun2	exon	ENSMUSG00000021595	ProperStrand	110	chr3	123210854	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-2.2561
chr8	30460373	30460390	LINE	L1MA7	L1	chr8L1MA730460133	NonProperStrand	7	chr7	106630251	106630297	protein_coding	Rps3	exon	ENSMUSG00000030744	ProperStrand	159	1	-15.7771
chr13	68759738	68764669	protein_coding	Adcy2	exon	ENSMUSG00000021536	ProperStrand	237	chr15	99329179	99329195	protein_coding	Faim2	utr3	ENSMUSG00000023011	ProperStrand	45	1	-11.1384
chr10	76516022	76516106	protein_coding	Col18a1	exon	ENSMUSG00000001435	ProperStrand	287	chr7	117190044	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	3	-2.8972
chr9	54759442	54759462	protein_coding	Ireb2	utr3	ENSMUSG00000032293	ProperStrand	45	chr17	35299507	35299631	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	3	-12.4993
chr10	79517733	79517791	protein_coding	Gpx4	exon	ENSMUSG00000075706	ProperStrand	55	chr1	72290890	72290973	snRNA	ENSMUSG00000093111_AC120136.1	.	ENSMUSG00000093111	ProperStrand	137	1	-11.8307
chr11	121198355	121199912	protein_coding	Wdr45l	exon	ENSMUSG00000025173	ProperStrand	8	chr5	108334234	108334324	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-8.8896
chr2	5801413	5801450	protein_coding	Sec61a2	intron	ENSMUSG00000025816	ProperStrand	4	chr19	8799581	8799610	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-12.4240
chr13	23830717	23830777	protein_coding	Hist1h1c	exon	ENSMUSG00000036181	ProperStrand	99	chr11	69483190	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-4.7097
chr2	51958422	51958473	protein_coding	Rif1	intron	ENSMUSG00000036202	ProperStrand	201	chr2	179710377	179710398	protein_coding	Taf4a	exon	ENSMUSG00000039117	ProperStrand	15	2	-21.7414
chr12	92880188	92880271	protein_coding	Ston2	exon	ENSMUSG00000020961	ProperStrand	9	chr16	23111396	23111486	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.5836
chr2	71679155	71679191	protein_coding	Itga6	exon	ENSMUSG00000027111	ProperStrand	54	chr4	131866609	131866675	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	1	-9.3166
chr4	41250206	41250223	protein_coding	Dcaf12	intron	ENSMUSG00000028436	ProperStrand	33	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-7.0285
chr4	133969715	133969778	protein_coding	Pafah2	intron	ENSMUSG00000037366	ProperStrand	19	chr14	76247710	76247752	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	4	-19.1768
chr18	36950199	36950753	protein_coding	Hars2	exon	ENSMUSG00000019143	ProperStrand	8	chr10	82456767	82456785	protein_coding	Chst11	intron	ENSMUSG00000034612	ProperStrand	170	1	-15.3677
chr17	25165808	25165908	protein_coding	Ift140	exon	ENSMUSG00000024169	ProperStrand	25	chr15	79913288	79913334	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-5.2686
chr5	121655015	121655126	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	chr4	122970435	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	16	-12.1537
chrX	20259726	20259796	protein_coding	Uba1	utr3	ENSMUSG00000001924	ProperStrand	156	chr5	130300420	130300550	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	8	-12.2294
chr11	60522372	60523003	protein_coding	Llgl1	exon	ENSMUSG00000020536	ProperStrand	20	chr3	68889105	68889185	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-5.3533
chr13	113673353	113673443	protein_coding	Skiv2l2	exon	ENSMUSG00000016018	ProperStrand	55	chr10	23505178	23505258	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.3541
chr11	120243130	120243149	protein_coding	Nploc4	utr3	ENSMUSG00000039703	ProperStrand	44	chr17	24665421	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	4	-17.0986
chr8	114243892	114243992	protein_coding	Bcar1	intron	ENSMUSG00000031955	ProperStrand	44	chr18	35716687	35716763	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.6971
chr10	122002845	122002935	LINE	L1Md_F2	L1	chr10L1Md_F2122002095	NonProperStrand	23	chr16	59157930	59158020	LINE	L1Md_F2	L1	chr16L1Md_F259157650	NonProperStrand	1	1	-inf
chr18	36784866	36784893	protein_coding	Ankhd1	exon	ENSMUSG00000024483	ProperStrand	56	chr4	107596083	107596100	protein_coding	Cpt2	utr5	ENSMUSG00000028607	NonProperStrand	106	1	-12.3093
chr16	22254553	22254643	protein_coding	Tra2b	exon	ENSMUSG00000022858	ProperStrand	32	chr4	131866159	131866239	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-4.8615
chr19	5719336	5719352	protein_coding	Ehbp1l1	exon	ENSMUSG00000024937	ProperStrand	75	chr5	74489597	74489638	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-3.3663
chr15	84143444	84143471	protein_coding	Parvb	utr3	ENSMUSG00000022438	ProperStrand	127	chr11	68887018	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-2.7741
chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	chr9	119311611	119311661	protein_coding	Acvr2b	utr5	ENSMUSG00000061393	ProperStrand	21	1	-11.8837
chr10	61508966	61508984	Low_complexity	GA-rich	Low_complexity	chr10GA-rich61508875	ProperStrand	1	chr4	123420698	123420745	protein_coding	Akirin1	exon	ENSMUSG00000023075	ProperStrand	13	1	-inf
chr9	122075466	122075482	protein_coding	Snrk	exon	ENSMUSG00000038145	NonProperStrand	97	chr14	33005110	33005139	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-3.1096
chr18	14104555	14104571	protein_coding	Zfp521	intron	ENSMUSG00000024420	NonProperStrand	9	chrX	93132860	93135679	protein_coding	Las1l	exon	ENSMUSG00000057421	ProperStrand	248	1	-14.3470
chr5	130590501	130590525	protein_coding	Tpst1	exon	ENSMUSG00000034118	ProperStrand	22	chr18	35750527	35750580	protein_coding	Matr3	utr3	ENSMUSG00000037236	ProperStrand	90	1	-14.5330
chr2	93708590	93708611	protein_coding	Accsl	exon	ENSMUSG00000075023	ProperStrand	2	chr11	6428055	6428102	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-10.4671
chr4	116826705	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	chr17	35088957	35089012	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	2	-1.0840
chrX	11635848	11635865	protein_coding	Bcor	exon	ENSMUSG00000040363	NonProperStrand	293	chr10	75399069	75399157	protein_coding	Chchd10	exon	ENSMUSG00000049422	ProperStrand	140	1	-8.4387
chr17	6949645	6949725	protein_coding	Ezr	intron	ENSMUSG00000052397	ProperStrand	126	chr7	117166766	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-3.4199
chr9	64023228	64023289	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	chr5	74489595	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	2	-0.7053
chr16	57391626	57391726	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr11	69483136	69483214	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	NonProperStrand	35	1	-11.3936
chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	chr17	35087942	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	2	-3.2414
chr18	10052130	10052153	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr9	39358287	39358304	protein_coding	Olfr958	exon	ENSMUSG00000050853	NonProperStrand	266	2	-9.5153
chr9	65011211	65011228	protein_coding	Igdcc3	intron	ENSMUSG00000032394	NonProperStrand	6	chr8	32260368	32260430	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-9.3125
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	7	-5.9605
chr11	106647672	106648224	protein_coding	Ddx5	exon	ENSMUSG00000020719	ProperStrand	181	chr11	97643007	97643037	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-0.8480
chr7	87679948	87679964	protein_coding	Blm	utr5	ENSMUSG00000030528	NonProperStrand	19	chr9	120038466	120038551	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.2199
chr9	30972176	30972194	protein_coding	Aplp2	exon	ENSMUSG00000031996	ProperStrand	172	chr15	34370545	34370642	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	4	-6.8648
chr1	13824255	13824271	LINE	Lx7	L1	chr1Lx713824216	ProperStrand	1	chr5	67658597	67659780	protein_coding	Tmem33	exon	ENSMUSG00000037720	ProperStrand	6	1	-inf
chr8	77641644	77641688	protein_coding	Mcm5	intron	ENSMUSG00000005410	ProperStrand	199	chr4	62051666	62051725	protein_coding	Slc31a1	utr3	ENSMUSG00000066150	ProperStrand	45	4	-19.3009
chr5	148113281	148113297	protein_coding	Cdx2	utr3	ENSMUSG00000029646	ProperStrand	276	chr6	41636403	41636419	protein_coding	Kel	utr3	ENSMUSG00000029866	ProperStrand	2	1	-18.0422
chr11	82692475	82692491	protein_coding	Rad51l3	exon	ENSMUSG00000018841	ProperStrand	112	chr7	117190015	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.2415
chr2	6332779	6332796	protein_coding	Usp6nl	intron	ENSMUSG00000039046	NonProperStrand	6	chr7	52976100	52976151	protein_coding	Rpl18	exon	ENSMUSG00000059070	ProperStrand	116	1	-16.6739
chr4	143088639	143088719	LINE	L1_Mur2	L1	chr4L1_Mur2143088495	NonProperStrand	1	chr4	102638792	102638882	protein_coding	Sgip1	exon	ENSMUSG00000028524	NonProperStrand	5	1	-inf
chr8	3568023	3568039	protein_coding	C330021F23Rik	utr5	ENSMUSG00000065952	NonProperStrand	85	chr18	75161108	75161137	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	1	-8.3243
chr3	83570468	83570485	protein_coding	Sfrp2	exon	ENSMUSG00000027996	NonProperStrand	32	chr11	68886949	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	10	-19.9306
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr3	126928535	126928556	protein_coding	Ank2	intron	ENSMUSG00000032826	ProperStrand	30	1	-8.4166
chr5	76003123	76003170	protein_coding	Kit	exon	ENSMUSG00000005672	ProperStrand	58	chr9	120038003	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-4.7711
chr1	54361816	54371000	protein_coding	Ccdc150	exon	ENSMUSG00000025983	ProperStrand	56	chr1	88247814	88247835	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-5.2310
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	37499433	37499466	protein_coding	Mgat4a	utr3	ENSMUSG00000026110	ProperStrand	16	1	-7.0757
chr10	16844327	16844346	LINE	L1_Mur1	L1	chr10L1_Mur116843303	ProperStrand	76	chr10	77871940	77873750	protein_coding	Rrp1	exon	ENSMUSG00000061032	ProperStrand	177	2	-16.7843
chr11	80965641	80965658	protein_coding	Accn1	exon	ENSMUSG00000020704	NonProperStrand	228	chrX	45765470	45765517	protein_coding	Elf4	utr3	ENSMUSG00000031103	ProperStrand	7	1	-15.0715
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr2	28324355	28324372	protein_coding	Mrps2	exon	ENSMUSG00000035772	NonProperStrand	47	1	-11.8630
chr6	141198763	141198780	protein_coding	Pde3a	exon	ENSMUSG00000041741	ProperStrand	9	chr4	131908809	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-7.7011
chr11	120675276	120675324	protein_coding	Fasn	exon	ENSMUSG00000025153	ProperStrand	298	chr9	75068568	75068585	protein_coding	Myo5a	utr3	ENSMUSG00000034593	NonProperStrand	9	1	-13.9915
chr3	121160149	121160603	protein_coding	Cnn3	utr3	ENSMUSG00000053931	ProperStrand	77	chr9	120038531	120038672	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	3	-6.8116
chr15	85889272	85889291	protein_coding	Gramd4	utr5	ENSMUSG00000035900	ProperStrand	39	chr18	34605243	34605260	protein_coding	Fam13b	exon	ENSMUSG00000036501	NonProperStrand	22	1	-16.2069
chr9	44855251	44855267	protein_coding	Mpzl2	exon	ENSMUSG00000032092	ProperStrand	31	chr9	15130902	15130987	snoRNA	ENSMUSG00000077394_snoU2_19	.	ENSMUSG00000077394	ProperStrand	96	9	-19.1171
chr11	69870769	69870785	protein_coding	Asgr1	exon	ENSMUSG00000020884	NonProperStrand	145	chr1	34254015	34254114	protein_coding	Dst	utr5	ENSMUSG00000026131	ProperStrand	461	1	-7.4693
chr11	94154535	94157276	protein_coding	Luc7l3	exon	ENSMUSG00000020863	ProperStrand	38	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.1259
chr8	23645509	23645531	protein_coding	Slc20a2	utr5	ENSMUSG00000037656	ProperStrand	63	chr8	32260359	32260422	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-4.5364
chr10	126487042	126487058	protein_coding	Cyp27b1	exon	ENSMUSG00000006724	ProperStrand	3	chr5	135529856	135529892	snoRNA	ENSMUSG00000088008_SCARNA20	.	ENSMUSG00000088008	ProperStrand	139	1	-17.7393
chr1	182524874	182524895	protein_coding	Parp1	exon	ENSMUSG00000026496	ProperStrand	227	chr7	148634750	148634824	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-1.6820
chr13	110693373	110693391	protein_coding	Pde4d	utr5	ENSMUSG00000021699	NonProperStrand	36	chr15	34370545	34370578	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-7.5249
chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	chr8	73419657	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	4	-1.5030
chr2	90235286	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr13	42087672	42087689	SINE	B4A	B4	chr13B4A42087393	NonProperStrand	6	1	-9.1372
chr2	115409583	115409602	protein_coding	BC052040	intron	ENSMUSG00000040282	ProperStrand	20	chr11	106362640	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-9.6204
chr4	117889749	117893113	protein_coding	Ptprf	exon	ENSMUSG00000033295	ProperStrand	337	chr5	74489613	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-0.9806
chr12	88513175	88513353	protein_coding	Tmed8	utr3	ENSMUSG00000034111	ProperStrand	22	chr4	131908689	131908804	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-4.9672
chr19	46107300	46107380	protein_coding	Ldb1	utr3	ENSMUSG00000025223	ProperStrand	42	chr10	23505152	23505197	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.7547
chr2	51531946	51531962	lincRNA	Gm13490	exon	ENSMUSG00000085014	ProperStrand	5	chr3	104626346	104626396	protein_coding	Capza1	utr3	ENSMUSG00000070372	ProperStrand	42	1	-18.2513
chr2	32818818	32818887	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	chr2	130103434	130103504	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-0.9683
chr17	88077661	88077677	protein_coding	Msh2	exon	ENSMUSG00000024151	ProperStrand	124	chr8	96696743	96697056	protein_coding	Mt2	utr5	ENSMUSG00000031762	ProperStrand	71	1	-11.5172
chr1	153330964	153347907	protein_coding	Rnf2	utr5	ENSMUSG00000026484	ProperStrand	13	chr3	68889123	68889203	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-6.2197
chr13	21872116	21872199	protein_coding	Hist1h1b	exon	ENSMUSG00000058773	ProperStrand	65	chr2	37255577	37255614	snoRNA	ENSMUSG00000077756_Snord90	.	ENSMUSG00000077756	ProperStrand	167	2	-17.4127
chr15	51243255	51243272	SINE	B4A	B4	chr15B4A51243200	NonProperStrand	1	chr3	123210854	123210980	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-inf
chr5	144691894	144691911	protein_coding	Pms2	exon	ENSMUSG00000079109	ProperStrand	21	chr19	8800421	8800479	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-5.5479
chr13	9833566	9833672	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr2	63936035	63936053	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	3	-2.0689
chr7	54345317	54345334	protein_coding	Ptpn5	exon	ENSMUSG00000030854	ProperStrand	6	chr16	23110958	23110999	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.7876
chr2	98507399	98507489	Satellite	GSAT_MM	Satellite	chr2GSAT_MM98506701	NonProperStrand	1	chr2	98507268	98507348	protein_coding	Gm10800	exon	ENSMUSG00000075014	ProperStrand	7	1	-inf
chr9	106364527	106364736	protein_coding	Pcbp4	exon	ENSMUSG00000023495	ProperStrand	36	chr7	56502165	56502202	protein_coding	Nav2	utr5	ENSMUSG00000052512	ProperStrand	106	1	-13.2013
chr4	62301831	62318908	protein_coding	Rgs3	exon	ENSMUSG00000059810	ProperStrand	40	chr7	29136576	29136656	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-5.3158
chr11	97026377	97026736	protein_coding	Kpnb1	exon	ENSMUSG00000001440	ProperStrand	197	chr1	88254227	88254317	protein_coding	Ncl	intron	ENSMUSG00000026234	ProperStrand	1184	1	-5.0228
chr6	114260511	114260527	protein_coding	Slc6a1	exon	ENSMUSG00000030310	NonProperStrand	147	chr18	33954816	33954869	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-1.9539
chr7	140855061	140855118	protein_coding	2700050L05Rik	utr3	ENSMUSG00000039990	ProperStrand	14	chr4	131908702	131908804	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	7	-inf
chrX	20259614	20259684	protein_coding	Uba1	utr3	ENSMUSG00000001924	ProperStrand	156	chr18	75160713	75160777	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	1	-7.2819
chr11	104197639	104197870	protein_coding	1700081L11Rik	exon	ENSMUSG00000018412	ProperStrand	73	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.4730
chr18	82773672	82773688	protein_coding	Zfp236	exon	ENSMUSG00000041258	NonProperStrand	117	chr5	121655027	121655095	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.5491
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr11	77995188	77995252	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-2.1254
chr9	88415969	88416025	lincRNA	Snhg5	exon	ENSMUSG00000032424	ProperStrand	13	chr11	6428077	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-6.1494
chr8	38049667	38049683	LTR	MLT1A0	MaLR	chr8MLT1A038049422	NonProperStrand	91	chr11	116938711	116938749	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-5.3433
chr1	88247816	88247835	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	chr10	23505550	23505621	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	4	-2.8274
chr17	46726993	46727044	protein_coding	Ptk7	exon	ENSMUSG00000023972	ProperStrand	101	chr12	110874223	110874291	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	1	-8.9338
chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	chr2	26494706	26494793	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.7431
chr10	83009584	83009617	protein_coding	A230046K03Rik	exon	ENSMUSG00000034560	ProperStrand	41	chr18	35714154	35714218	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-6.9735
chr2	129004104	129004121	antisense	AI847159	.	ENSMUSG00000084826	NonProperStrand	63	chr3	41419533	41419632	protein_coding	Phf17	utr3	ENSMUSG00000025764	ProperStrand	101	1	-12.1696
chr7	52840863	52840943	protein_coding	Bcat2	exon	ENSMUSG00000030826	ProperStrand	24	chr17	39985674	39985763	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-7.7605
chr13	24178168	24178187	protein_coding	Lrrc16a	intron	ENSMUSG00000021338	ProperStrand	12	chr8	129468815	129468868	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-7.6151
chr11	120148960	120148976	protein_coding	Bahcc1	exon	ENSMUSG00000039741	NonProperStrand	268	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-3.7074
chr2	118246585	118247709	protein_coding	Eif2ak4	exon	ENSMUSG00000005102	ProperStrand	11	chr10	100057769	100057785	protein_coding	1700017N19Rik	exon	ENSMUSG00000056912	NonProperStrand	1	1	-inf
chr10	41916983	41994795	protein_coding	Foxo3	exon	ENSMUSG00000048756	ProperStrand	59	chr16	23111392	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	6	-9.4498
chr1	71699457	71699580	protein_coding	Fn1	utr5	ENSMUSG00000026193	ProperStrand	931	chr7	133938804	133938841	protein_coding	Aldoa	utr3	ENSMUSG00000030695	ProperStrand	721	1	-3.0520
chr2	168008721	168008778	protein_coding	Adnp	exon	ENSMUSG00000051149	ProperStrand	48	chr17	24857717	24857807	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.6786
chr10	79441161	79441178	protein_coding	ORF61	exon	ENSMUSG00000013858	NonProperStrand	13	chr9	15123930	15123963	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	NonProperStrand	100	1	-15.4064
chr4	107780230	107784849	protein_coding	Scp2	exon	ENSMUSG00000028603	ProperStrand	23	chr19	8800108	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-9.5401
chr17	35383911	35383947	protein_coding	Ddx39b	exon	ENSMUSG00000019432	ProperStrand	119	chr15	99456781	99456951	protein_coding	Racgap1	exon	ENSMUSG00000023015	ProperStrand	47	1	-12.4316
chr19	46442219	46442267	protein_coding	Tmem180	exon	ENSMUSG00000025227	ProperStrand	20	chr7	29136589	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.3737
chr7	51505879	51505910	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	chr4	116862605	116862662	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	3	-10.1883
chr5	74489203	74489254	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr12	70413651	70415416	protein_coding	Nemf	exon	ENSMUSG00000020982	ProperStrand	77	1	-5.1357
chr2	130101991	130102106	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	chr1	162966813	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	4	-1.3014
chr8	23763839	23763856	protein_coding	Polb	utr5	ENSMUSG00000031536	ProperStrand	23	chr5	103418645	103418661	protein_coding	Mapk10	exon	ENSMUSG00000046709	NonProperStrand	7	1	-19.1569
chr4	116826704	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	chr16	56035865	56035914	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	1	-2.6525
chr13	76156115	76156132	protein_coding	Rfesd	utr5	ENSMUSG00000043190	ProperStrand	30	chr3	34549377	34549440	protein_coding	Sox2	exon	ENSMUSG00000074637	ProperStrand	299	1	-11.4946
chr10	61732710	61732790	protein_coding	Hk1	exon	ENSMUSG00000037012	ProperStrand	84	chr8	73419657	73419747	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.5381
chr3	108238865	108240490	protein_coding	Sars	exon	ENSMUSG00000068739	ProperStrand	45	chr19	8799054	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-6.4004
chr4	24825413	24825433	protein_coding	Ndufaf4	exon	ENSMUSG00000028261	ProperStrand	5	chr7	116663710	116663758	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-7.4047
chr11	102941698	102941714	protein_coding	Plcd3	exon	ENSMUSG00000020937	ProperStrand	9	chr7	29136525	29136556	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.9747
chr13	23713908	23713950	protein_coding	Hist1h1e	exon	ENSMUSG00000051627	ProperStrand	41	chr4	131908236	131908348	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-3.6365
chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr11	116780250	116780266	protein_coding	Mgat5b	utr5	ENSMUSG00000043857	ProperStrand	21	1	-8.5609
chr8	125009755	125020306	protein_coding	Fam38a	exon	ENSMUSG00000014444	ProperStrand	132	chr14	76247739	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	7	-17.7793
chr6	119876581	119876671	protein_coding	Wnk1	exon	ENSMUSG00000045962	ProperStrand	221	chr9	120038462	120038542	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-0.9998
chr2	168581369	168581446	protein_coding	Sall4	exon	ENSMUSG00000027547	ProperStrand	82	chr1	162967523	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-2.9104
chr10	79745772	79745862	protein_coding	Dazap1	exon	ENSMUSG00000069565	ProperStrand	57	chr1	72272879	72272959	snRNA	ENSMUSG00000075752_U2	.	ENSMUSG00000075752	ProperStrand	535	1	-9.0370
chr8	5640253	5640270	protein_coding	Gm1840	exon	ENSMUSG00000043192	NonProperStrand	6	chr2	130101260	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-11.3294
chr2	90235296	90235327	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr16	33963964	33966914	protein_coding	Umps	exon	ENSMUSG00000022814	ProperStrand	20	1	-6.6233
chr7	117189862	117189934	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr19	8799596	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	3	-2.3140
chr14	67422798	67422873	protein_coding	Dpysl2	utr3	ENSMUSG00000022048	ProperStrand	36	chr1	162965999	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-4.5692
chr11	62660825	62660841	protein_coding	Fbxw10	exon	ENSMUSG00000090173	NonProperStrand	3	chr4	131908236	131908351	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-inf
chr4	3762433	3762648	protein_coding	Rps20	utr5	ENSMUSG00000028234	ProperStrand	71	chr8	73419657	73419694	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.8304
chr4	126703411	126703435	protein_coding	Sfpq	exon	ENSMUSG00000028820	ProperStrand	340	chr5	116071701	116071718	protein_coding	Gcn1l1	exon	ENSMUSG00000041638	ProperStrand	408	1	-6.0298
chr12	50952301	50952319	LINE	L1_Mm	L1	chr12L1_Mm50952012	NonProperStrand	6	chr16	23110455	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-6.9463
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr1	162966206	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-3.3482
chr8	125626932	125626970	protein_coding-noncoding	Rpl13	utr5	ENSMUSG00000000740	ProperStrand	9	chr19	8963027	8963084	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.8692
chr11	108783076	108783093	protein_coding	Axin2	utr5	ENSMUSG00000000142	NonProperStrand	81	chr19	8963131	8963178	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.7905
chr8	107899663	107899680	protein_coding	Plekhg4	utr5	ENSMUSG00000014782	ProperStrand	2	chr11	6519876	6519928	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-15.4342
chr17	17673968	17673985	protein_coding	Lnpep	exon	ENSMUSG00000023845	ProperStrand	23	chr4	3762227	3762289	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	1	-11.4287
chr17	39979943	39980011	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr8	23694146	23694162	protein_coding	Vdac3	exon	ENSMUSG00000008892	ProperStrand	8	1	-11.3470
chr14	119693352	119693368	protein_coding	Hs6st3	intron	ENSMUSG00000053465	NonProperStrand	134	chr19	8799581	8799638	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-5.1905
chr17	56529002	56529028	protein_coding	Kdm4b	exon	ENSMUSG00000024201	ProperStrand	45	chr5	115545102	115545176	protein_coding	Sppl3	exon	ENSMUSG00000029550	ProperStrand	33	2	-19.1451
chr11	101466286	101466351	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	chr1	88252836	88252906	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-2.4668
chr9	15118329	15118375	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	chr1	161270414	161270461	snoRNA	ENSMUSG00000089536_Scarna3a	.	ENSMUSG00000089536	ProperStrand	247	1	-1.1615
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr4	123605857	123605886	protein_coding	Rragc	intron	ENSMUSG00000028646	ProperStrand	6	1	-11.6677
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr3	88952697	88952713	protein_coding	Hcn3	exon	ENSMUSG00000028051	ProperStrand	40	1	-5.2466
chr16	96343476	96343495	protein_coding	Hmgn1	utr3	ENSMUSG00000040681	ProperStrand	38	chr10	23505152	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.9123
chr11	77996697	77996713	protein_coding	Rpl23a	intron	ENSMUSG00000058546	NonProperStrand	7	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-10.9937
chr11	80041932	80041950	protein_coding	Rhot1	intron	ENSMUSG00000017686	ProperStrand	40	chr5	147239336	147239415	protein_coding	Wasf3	intron	ENSMUSG00000029636	ProperStrand	32	1	-15.4053
chr2	19314954	19314972	protein_coding	Msrb2	exon	ENSMUSG00000023094	ProperStrand	4	chr11	6428097	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	NonProperStrand	91	1	-18.0090
chrX	149830567	149830583	protein_coding	Klf8	utr3	ENSMUSG00000041649	NonProperStrand	107	chr2	158182208	158182272	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-3.9007
chr11	45723143	45723160	protein_coding	Clint1	utr3	ENSMUSG00000006169	NonProperStrand	273	chr5	108336363	108336406	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-2.1349
chr10	16883442	16883522	LINE	Lx2	L1	chr10Lx216883117	NonProperStrand	1	chr15	83305123	83305213	LTR	MTC	MaLR	chr15MTC83305012	NonProperStrand	1	1	-inf
chrX	11635848	11635865	protein_coding	Bcor	exon	ENSMUSG00000040363	NonProperStrand	293	chr11	106362339	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-2.8574
chr7	117189863	117189943	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr7	52382755	52382802	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	2	-1.3610
chr4	141032234	141032324	protein_coding	Spen	exon	ENSMUSG00000040761	ProperStrand	161	chr7	116663634	116663714	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.0178
chr4	43505656	43505672	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr10	62061323	62061423	protein_coding	Ddx21	exon	ENSMUSG00000020075	ProperStrand	137	4	-6.7129
chr17	34742940	34745321	protein_coding	Agpat1	intron	ENSMUSG00000034254	ProperStrand	28	chr16	23110959	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-3.6312
chr18	75161569	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	chr13	90238598	90238720	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	1	-2.7631
chr7	107756579	107756722	protein_coding	Rab6a	utr5	ENSMUSG00000030704	ProperStrand	23	chr15	34370661	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-5.3878
chrX	163646999	163647089	protein_coding	Tmsb4x	utr5	ENSMUSG00000049775	ProperStrand	11	chr16	23110894	23110951	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.6241
chrX	71473271	71473298	protein_coding	Flna	exon	ENSMUSG00000031328	ProperStrand	134	chr1	162965562	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	4	-7.3189
chr5	31093938	31093956	protein_coding	Dpysl5	exon	ENSMUSG00000029168	NonProperStrand	38	chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	1	-13.4909
chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	chr2	144080641	144081138	protein_coding	Snx5	exon	ENSMUSG00000027423	ProperStrand	64	1	-10.3465
chr1	167711531	167711558	processed_transcript	Gm16565	.	ENSMUSG00000089829	ProperStrand	4	chr18	35714142	35714232	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	4	-inf
chr3	157199342	157199449	protein_coding	Zranb2	exon	ENSMUSG00000028180	NonProperStrand	2	chrX	132335862	132335974	protein_coding	Gprasp1	exon	ENSMUSG00000043384	ProperStrand	57	1	-20.8877
chr12	58691976	58691992	antisense	4921518K17Rik	.	ENSMUSG00000085851	ProperStrand	75	chr4	131908697	131908751	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.9361
chr1	79642969	79642990	protein_coding	Ap1s3	intron	ENSMUSG00000054702	ProperStrand	4	chr4	131865856	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.0048
chr8	68771815	68771837	protein_coding	March1	intron	ENSMUSG00000036469	ProperStrand	13	chr17	24665420	24665459	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-7.9975
chr12	72038891	72038907	protein_coding	Actr10	utr5	ENSMUSG00000021076	ProperStrand	21	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	3	-16.4922
chr16	91659830	91659930	protein_coding	Son	exon	ENSMUSG00000022961	ProperStrand	59	chr4	138997248	138997307	protein_coding	Ubr4	intron	ENSMUSG00000066036	ProperStrand	304	1	-10.0952
chr1	71625175	71625265	protein_coding	Atic	utr3	ENSMUSG00000026192	ProperStrand	30	chr4	131908814	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.2894
chr1	36161350	36161391	protein_coding	Hs6st1	utr3	ENSMUSG00000045216	ProperStrand	63	chr1	90123798	90124639	protein_coding	Heatr7b1	utr5	ENSMUSG00000079429	ProperStrand	147	1	-11.4166
chr1	180567043	180567100	snRNA	ENSMUSG00000064967_U1	.	ENSMUSG00000064967	ProperStrand	1	chr4	122970395	122970485	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-inf
chr6	134841018	134841067	protein_coding	Gpr19	intron	ENSMUSG00000032641	ProperStrand	27	chr11	69483136	69483276	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	9	-21.3823
chr7	152117477	152117493	protein_coding	Ccnd1	utr3	ENSMUSG00000070348	ProperStrand	93	chr2	26494792	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.3434
chr6	125105751	125105841	protein_coding	Iffo1	intron	ENSMUSG00000038271	ProperStrand	4	chr4	131908691	131908771	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-16.0559
chr16	32243865	32243943	snoRNA	ENSMUSG00000080440_SNORA79	.	ENSMUSG00000080440	ProperStrand	140	chr3	123210854	123210894	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-1.7425
chr19	5845293	5845371	non_coding	Neat1	.	ENSMUSG00000092274	ProperStrand	63	chr4	34756768	34756792	protein_coding	Zfp292	exon	ENSMUSG00000039967	ProperStrand	45	3	-inf
chr19	8798483	8798553	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	chr9	15130727	15130768	snoRNA	ENSMUSG00000077506_Scarna9	.	ENSMUSG00000077506	ProperStrand	148	2	-5.9477
chr5	92719052	92719132	protein_coding	Sdad1	exon	ENSMUSG00000029415	ProperStrand	63	chr18	35716766	35716856	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.0896
chr6	112586452	112586503	protein_coding	Rad18	intron	ENSMUSG00000030254	ProperStrand	38	chr15	82725620	82725636	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	3	-inf
chr5	108559061	108559105	protein_coding	Tmed5	exon	ENSMUSG00000063406	ProperStrand	9	chr11	6428089	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-6.9084
chr11	77995216	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	chr15	5068432	5068480	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	3	-1.4025
chr15	97622392	97622482	protein_coding	Slc48a1	utr3	ENSMUSG00000081534	ProperStrand	16	chr18	33954817	33954897	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-6.0667
chr14	103713521	103713597	protein_coding	Mycbp2	exon	ENSMUSG00000033004	ProperStrand	129	chr5	108336365	108336455	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-3.4386
chr6	115758009	115758120	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr12	92811865	92811933	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	7	-11.3858
chr1	162965534	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	NonProperStrand	10	chr17	35087921	35087964	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	NonProperStrand	2	1	-inf
chr4	41173365	41174302	protein_coding	Ubap2	exon	ENSMUSG00000028433	ProperStrand	292	chr15	79908930	79909015	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-2.5343
chr4	137719487	137721702	protein_coding	Eif4g3	exon	ENSMUSG00000028760	ProperStrand	42	chr10	23505258	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.7547
chr7	117189863	117189922	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr4	116827119	116827187	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-0.8058
chr2	179918146	179918374	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr7	106002470	106002486	protein_coding	Wnt11	utr3	ENSMUSG00000015957	ProperStrand	14	1	-12.6593
chr14	26705732	26705826	protein_coding	Anxa11	utr3	ENSMUSG00000021866	ProperStrand	30	chr18	75160712	75160777	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	5	-19.6303
chr10	77076772	77078897	protein_coding	Sumo3	exon	ENSMUSG00000020265	ProperStrand	31	chr16	37384897	37384913	protein_coding	Stxbp5l	utr5	ENSMUSG00000022829	ProperStrand	332	1	-11.2187
chr4	122968636	122968736	protein_coding	Pabpc4	intron	ENSMUSG00000011257	ProperStrand	85	chr10	23505212	23505279	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-0.7974
chr9	98976077	98976167	protein_coding	Pik3cb	intron	ENSMUSG00000032462	ProperStrand	48	chr5	74489595	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-4.1981
chr6	125113051	125113249	protein_coding	Gapdh	exon	ENSMUSG00000057666	ProperStrand	356	chr1	162967492	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-0.7262
chr14	122042376	122051030	protein_coding	Dock9	exon	ENSMUSG00000025558	ProperStrand	38	chr10	23505192	23505238	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.9123
chr18	61858145	61859015	protein_coding	Pcyox1l	exon	ENSMUSG00000024579	ProperStrand	15	chr18	33954826	33954916	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	5	-20.3110
chr3	60303512	60303573	protein_coding	Mbnl1	intron	ENSMUSG00000027763	NonProperStrand	2	chr7	52381973	52382011	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	2	-inf
chr11	6518508	6518598	protein_coding	Tbrg4	exon	ENSMUSG00000000384	ProperStrand	24	chr8	129468778	129468858	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-6.2064
chr16	74119320	74119337	protein_coding	Robo2	intron	ENSMUSG00000052516	NonProperStrand	28	chr4	116828379	116828453	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-9.9184
chr5	141377002	141377018	protein_coding	Card11	exon	ENSMUSG00000036526	ProperStrand	30	chr11	69483142	69483237	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.6945
chrX	147081366	147081394	protein_coding	Tro	exon	ENSMUSG00000025272	ProperStrand	13	chr14	33005139	33005236	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	4	-19.5583
chr17	13114996	13115057	protein_coding	Tcp1	exon	ENSMUSG00000068039	ProperStrand	116	chr8	129468746	129468782	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-3.1880
chr11	119141977	119142009	protein_coding	Gaa	intron	ENSMUSG00000025579	ProperStrand	149	chr5	130300435	130300525	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.1153
chr2	4829164	4829180	protein_coding	Sephs1	utr3	ENSMUSG00000026662	NonProperStrand	271	chr7	52715005	52715051	protein_coding	Ftl1	utr5	ENSMUSG00000050708	ProperStrand	807	1	-5.1459
chr12	53105918	53107365	protein_coding	6530401N04Rik	exon	ENSMUSG00000020956	ProperStrand	11	chr6	124810680	124810696	protein_coding	Gpr162	exon	ENSMUSG00000038390	NonProperStrand	40	1	-17.5747
chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	chr14	33005065	33005139	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	2	-2.4335
chr11	61241361	61241383	LTR	MT2A	ERVL	chr11MT2A61241243	NonProperStrand	3	chr3	68889153	68889212	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-9.4435
chr15	69516005	69516026	snoRNA	ENSMUSG00000080689_SNORA79	.	ENSMUSG00000080689	ProperStrand	7	chr1	89673629	89673719	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-7.5185
chr8	80096532	80096550	protein_coding	Prmt10	exon	ENSMUSG00000037134	NonProperStrand	2	chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	1	-17.3529
chr11	97546405	97546421	protein_coding	Mllt6	utr3	ENSMUSG00000038437	ProperStrand	110	chr11	77995189	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-4.9993
chr16	23111373	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	chr1	162966190	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	18	-0.7036
chr17	89408214	89408230	protein_coding	Fshr	intron	ENSMUSG00000032937	NonProperStrand	29	chr11	6428103	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.5563
chr5	44492036	44492053	protein_coding	Gm16401	utr5	ENSMUSG00000072962	ProperStrand	3	chr1	162967488	162967507	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-9.6828
chr5	100855902	100855942	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr15	98356834	98356913	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	2	-2.9105
chr10	93308400	93308431	protein_coding	Usp44	utr5	ENSMUSG00000020020	ProperStrand	14	chr4	131865923	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-10.7509
chr12	110881050	110881099	lincRNA	Rian	intron	ENSMUSG00000091793	ProperStrand	612	chr19	11271200	11271217	protein_coding	Ms4a13	utr5	ENSMUSG00000057240	ProperStrand	59	1	-8.7001
chr13	9574684	9574701	protein_coding	Dip2c	exon	ENSMUSG00000048264	NonProperStrand	51	chr19	8799021	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-6.1527
chr6	86525179	86525200	LINE	L1M	L1	chr6L1M86525165	NonProperStrand	1	chr18	35716833	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-inf
chr1	9735634	9735681	protein_coding	Vcpip1	exon	ENSMUSG00000045210	ProperStrand	34	chr3	123210894	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.0438
chr18	58135533	58135551	SINE	ID_B1	B4	chr18ID_B158135452	ProperStrand	1	chr13	74460506	74460593	protein_coding	Sdha	utr3	ENSMUSG00000021577	ProperStrand	70	1	-inf
chr5	139711629	139712607	protein_coding	Sun1	exon	ENSMUSG00000036817	ProperStrand	108	chr7	51505242	51505308	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	2	-11.2287
chr17	35994500	35994590	protein_coding	Mdc1	utr3	ENSMUSG00000061607	ProperStrand	85	chr4	131865870	131865950	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.2579
chr6	115196696	115196717	protein_coding	Timp4	intron	ENSMUSG00000030317	ProperStrand	1	chr8	73419661	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-inf
chr12	20474198	20474232	LTR	MTE2b	MaLR	chr12MTE2b20474146	NonProperStrand	1	chr11	6428123	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-inf
chr14	71065339	71065355	protein_coding	Xpo7	utr3	ENSMUSG00000022100	ProperStrand	109	chr10	23505559	23505627	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-6.3664
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr16	23110524	23110587	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.0045
chr8	86096755	86096791	protein_coding	Tecr	exon	ENSMUSG00000031708	ProperStrand	100	chr8	73419657	73419774	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.2440
chr2	164677039	164677977	protein_coding	Pltp	exon	ENSMUSG00000017754	ProperStrand	15	chr2	153050783	153050799	protein_coding	Tspyl3	exon	ENSMUSG00000074671	ProperStrand	228	1	-13.4568
chr19	11271200	11271217	protein_coding	Ms4a13	utr5	ENSMUSG00000057240	ProperStrand	59	chr9	120038467	120038517	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.0692
chr8	46127350	46127591	protein_coding	Fat1	exon	ENSMUSG00000070047	ProperStrand	306	chr7	51505231	51505308	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	2	-8.1464
chr13	21284457	21284500	protein_coding	Trim27	utr3	ENSMUSG00000021326	ProperStrand	28	chr1	162968460	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	3	-17.1113
chr5	34993117	34993217	protein_coding	Nop14	exon	ENSMUSG00000036693	ProperStrand	35	chr8	73419657	73419729	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.1302
chr14	41720451	41720541	protein_coding	Tspan14	utr3	ENSMUSG00000037824	ProperStrand	31	chr15	98350159	98350239	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-6.0531
chr9	103092002	103092060	protein_coding	Srprb	utr3	ENSMUSG00000032553	ProperStrand	11	chr17	34747537	34747555	protein_coding	Agpat1	exon	ENSMUSG00000034254	NonProperStrand	39	1	-17.4650
chr2	162898540	162898640	protein_coding	Mybl2	exon	ENSMUSG00000017861	ProperStrand	230	chr1	162966824	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-3.6777
chr8	111238942	111316685	protein_coding	Zfhx3	utr5	ENSMUSG00000038872	ProperStrand	65	chr16	23110909	23111011	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-2.9863
chr2	90235320	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	134665710	134665781	protein_coding	Dusp16	utr3	ENSMUSG00000030203	ProperStrand	27	1	-6.0220
chr13	59932957	59932973	LINE	L1_Mur3	L1	chr13L1_Mur359932072	ProperStrand	32	chr1	88252835	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-7.8961
chr10	122002284	122003065	LINE	L1Md_F2	L1	chr10L1Md_F2122002095	ProperStrand	17	chr12	68768892	68769017	LINE	L1Md_F2	L1	chr12L1Md_F268768613	ProperStrand	13	2	-20.6257
chr5	38625348	38625399	protein_coding	Lyar	utr3	ENSMUSG00000067367	ProperStrand	33	chr18	35714247	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	3	-10.9762
chr7	86881539	86881639	protein_coding	Pex11a	utr3	ENSMUSG00000030545	ProperStrand	9	chr11	62416955	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	9	-inf
mmu-miR-6238	1	19	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr6	123089131	123089269	protein_coding	Clec4a2	exon	ENSMUSG00000030148	ProperStrand	44	1	-11.1590
chr3	89838054	89838078	protein_coding	Ubap2l	exon	ENSMUSG00000042520	ProperStrand	88	chr5	130295496	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	2	-7.4956
chr5	109124122	109132306	protein_coding	Fgfrl1	exon	ENSMUSG00000008090	ProperStrand	111	chr17	27693588	27696499	protein_coding	Hmga1	utr5	ENSMUSG00000046711	ProperStrand	180	1	-9.8743
chr16	58559513	58559603	SINE	B1_Mur1	Alu	chr16B1_Mur158559507	NonProperStrand	1	chr14	118376137	118376217	protein_coding	Gpc6	utr3	ENSMUSG00000058571	ProperStrand	28	1	-inf
chr18	36672329	36674759	protein_coding	Hbegf	exon	ENSMUSG00000024486	ProperStrand	2	chr8	73419316	73419509	protein_coding	Rpl18a	exon	ENSMUSG00000045128	ProperStrand	394	1	-17.0863
chr2	158440434	158440450	protein_coding	Slc32a1	exon	ENSMUSG00000037771	ProperStrand	1	chr11	6428077	6428165	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-inf
chr11	53492405	53492480	protein_coding	Rad50	exon	ENSMUSG00000020380	ProperStrand	61	chr17	80600067	80600132	protein_coding	Srsf7	utr3	ENSMUSG00000024097	ProperStrand	31	1	-14.6022
chr4	122968591	122968681	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	chrX	143918872	143918924	snoRNA	ENSMUSG00000084421_SNORA35	.	ENSMUSG00000084421	ProperStrand	293	2	-5.5672
chr4	135427980	135428098	protein_coding	Pnrc2	exon	ENSMUSG00000028675	ProperStrand	2	chr8	87525221	87525237	protein_coding	Hook2	exon	ENSMUSG00000052566	ProperStrand	204	1	-18.9522
chr11	63264079	63264095	LTR	ORR1D1	MaLR	chr11ORR1D163264002	NonProperStrand	11	chr9	15119648	15119675	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.8656
chr11	69419077	69419177	protein_coding	Atp1b2	utr5	ENSMUSG00000041329	ProperStrand	28	chr16	23111762	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.2134
chr11	11867679	11870432	protein_coding	Grb10	exon	ENSMUSG00000020176	NonProperStrand	159	chr12	106269284	106269384	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-2.3851
chr1	130155529	130156059	protein_coding	Ubxn4	exon	ENSMUSG00000026353	ProperStrand	19	chrX	34622905	34622985	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-5.3629
chr11	102342169	102342197	protein_coding	Gpatch8	exon	ENSMUSG00000034621	ProperStrand	49	chrX	136242613	136242631	protein_coding	Tbc1d8b	intron	ENSMUSG00000042473	NonProperStrand	27	1	-15.3485
chr18	60995312	60995361	protein_coding	Tcof1	exon	ENSMUSG00000024613	ProperStrand	68	chr18	33954841	33954941	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-3.2766
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr11	77996560	77996623	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-4.2198
chr15	76066843	76066883	protein_coding	Parp10	intron	ENSMUSG00000063268	ProperStrand	7	chr4	131908236	131908320	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-17.7561
chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr14	119008849	119008868	protein_coding	Abcc4	intron	ENSMUSG00000032849	NonProperStrand	24	1	-8.2896
chr11	30753378	30756112	protein_coding	Psme4	exon	ENSMUSG00000040850	ProperStrand	40	chr7	148634701	148634781	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-4.7599
chr2	93917088	93917129	protein_coding	Hsd17b12	intron	ENSMUSG00000027195	ProperStrand	28	chr8	67522507	67522524	protein_coding	Trim60	utr3	ENSMUSG00000053490	ProperStrand	17	1	-17.3942
chr6	124699532	124706447	protein_coding	Atn1	exon	ENSMUSG00000004263	ProperStrand	20	chr10	23505152	23505278	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-7.8391
chr1	162967492	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	chr2	144087324	144087463	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	8	-0.8445
chr2	164597410	164597510	protein_coding	Ube2c	exon	ENSMUSG00000001403	ProperStrand	40	chr9	15119713	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.3539
chr10	3206204	3208129	protein_coding	Cnksr3	exon	ENSMUSG00000015202	ProperStrand	22	chr8	73989255	73989282	protein_coding	Mrpl34	exon	ENSMUSG00000034880	ProperStrand	8	1	-18.6015
chr2	4829164	4829180	protein_coding	Sephs1	utr3	ENSMUSG00000026662	NonProperStrand	271	chr17	35087895	35087947	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-2.4222
chr4	96412508	96412526	protein_coding	Gm12695	intron	ENSMUSG00000078639	ProperStrand	110	chr19	8799022	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-4.6562
chr14	76372318	76372408	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	chr17	24856671	24856700	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-2.3847
chr1	83776773	83776795	SINE	B3A	B2	chr1B3A83776692	ProperStrand	1	chrX	13164082	13177489	protein_coding	Cask	exon	ENSMUSG00000031012	NonProperStrand	26	1	-inf
chr7	133942613	133942641	protein_coding	Aldoa	utr5	ENSMUSG00000030695	ProperStrand	721	chr14	33005129	33005236	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	3	-1.4302
chr9	45198908	45200307	protein_coding	Fxyd6	exon	ENSMUSG00000066705	ProperStrand	30	chr9	120038553	120038643	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.3284
chr6	88841681	88841774	protein_coding	Mcm2	exon	ENSMUSG00000002870	ProperStrand	83	chr2	26494708	26494740	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.5364
chr2	126965203	126965219	protein_coding	Itpripl1	utr3	ENSMUSG00000074825	ProperStrand	22	chr4	131908236	131908295	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-5.3518
chr7	133520649	133520700	protein_coding	Spns1	utr5	ENSMUSG00000030741	ProperStrand	9	chr11	121784091	121784108	protein_coding	Gm12588	intron	ENSMUSG00000062632	ProperStrand	9	1	-19.9880
chr4	43505702	43505847	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr11	77659914	77664305	protein_coding	Myo18a	exon	ENSMUSG00000000631	ProperStrand	124	3	-5.1507
chr18	70728114	70728133	protein_coding	Mbd2	utr5	ENSMUSG00000024513	NonProperStrand	13	chr2	130103435	130103502	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	6	-inf
chr1	10194702	10194762	protein_coding	Arfgef1	intron	ENSMUSG00000067851	ProperStrand	54	chr2	26494708	26494808	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.2978
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr12	70860699	70860716	protein_coding	Cdkl1	intron	ENSMUSG00000020990	ProperStrand	1	1	-inf
chr2	145076803	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	chr5	121655017	121655153	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	9	-5.0434
chr19	10609940	10620195	protein_coding	Cpsf7	utr3	ENSMUSG00000034820	ProperStrand	66	chr5	111812088	111812105	protein_coding	Pitpnb	exon	ENSMUSG00000050017	ProperStrand	137	2	-17.7912
chr2	31889493	31889517	protein_coding	Nup214	exon	ENSMUSG00000001855	ProperStrand	62	chr5	120912016	120912033	protein_coding	Sdsl	exon	ENSMUSG00000029596	ProperStrand	5	1	-18.4825
chr7	26091164	26091183	protein_coding	Tmem145	utr5	ENSMUSG00000043843	ProperStrand	24	chr7	118219592	118219651	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-9.7299
chr5	127737478	127737494	antisense	1700085B03Rik	.	ENSMUSG00000087104	ProperStrand	55	chr7	25865036	25865055	protein_coding	Zfp574	exon	ENSMUSG00000045252	ProperStrand	14	1	-16.4696
chr3	137849424	137849440	protein_coding	4930579F01Rik	utr5	ENSMUSG00000012042	NonProperStrand	156	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-5.8500
chr9	40610887	40610913	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr15	58775236	58775277	protein_coding	Mtss1	exon	ENSMUSG00000022353	ProperStrand	68	1	-7.8888
chr7	26081385	26082124	protein_coding	Pafah1b3	exon	ENSMUSG00000005447	ProperStrand	4	chr19	8799830	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-10.5562
chr2	125454990	125455006	protein_coding	Shc4	utr3	ENSMUSG00000035109	ProperStrand	19	chr7	51505511	51505591	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	1	-11.1093
chr1	121458185	121458202	protein_coding	Epb4.1l5	intron	ENSMUSG00000026383	NonProperStrand	28	chr9	15118245	15118305	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-4.9141
chr19	12850940	12851353	protein_coding	Zfp91	exon	ENSMUSG00000024695	NonProperStrand	2	chr16	23110886	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-inf
chr2	30813931	30813947	protein_coding	Tor1b	utr3	ENSMUSG00000026848	NonProperStrand	1	chr15	79908957	79908984	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-inf
chrX	20192857	20192937	protein_coding	Ndufb11	exon	ENSMUSG00000031059	ProperStrand	4	chr16	23111776	23111816	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-7.1763
chr4	43505657	43505723	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr7	17383290	17383308	protein_coding	Slc1a5	utr3	ENSMUSG00000001918	ProperStrand	19	3	-12.4687
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr2	26493365	26493497	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-0.9645
chr11	53228949	53228981	protein_coding	Aff4	exon	ENSMUSG00000049470	ProperStrand	94	chr5	108336416	108336469	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-4.0252
chr16	91658677	91658767	protein_coding	Son	exon	ENSMUSG00000022961	ProperStrand	59	chr7	117190016	117190060	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.3631
chr12	87847350	87847440	protein_coding	Esrrb	exon	ENSMUSG00000021255	ProperStrand	254	chr7	134671417	134671497	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-5.0331
chrX	33686226	33686244	protein_coding	Il13ra1	intron	ENSMUSG00000017057	ProperStrand	1	chr16	4128485	4128536	protein_coding	Crebbp	exon	ENSMUSG00000022521	ProperStrand	56	1	-inf
chr12	112907638	112907688	protein_coding	Ckb	utr3	ENSMUSG00000001270	ProperStrand	28	chr12	112779241	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-6.2715
chr3	108499885	108499965	protein_coding	Gpsm2	exon	ENSMUSG00000027883	ProperStrand	20	chr5	121655065	121655155	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	3	-13.7179
chr2	145076805	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	chr15	79908928	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	5	-5.2293
chr18	78020657	78021051	protein_coding	Atp5a1	exon	ENSMUSG00000025428	ProperStrand	254	chr13	107697797	107697897	protein_coding	Ipo11	intron	ENSMUSG00000042590	ProperStrand	120	13	-20.0694
chr4	128867196	128867212	protein_coding	Yars	exon	ENSMUSG00000028811	ProperStrand	131	chr7	51505284	51505308	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	1	-6.5998
chr14	56505701	56505732	protein_coding	Khnyn	exon	ENSMUSG00000047153	ProperStrand	25	chr6	115758041	115758131	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	24	-19.3272
chr19	6537042	6537076	protein_coding	Nrxn2	intron	ENSMUSG00000033768	ProperStrand	19	chr7	148634803	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-6.2295
chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	chr5	115939565	115939612	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-3.8569
chr11	98190871	98190888	protein_coding	Neurod2	utr5	ENSMUSG00000038255	ProperStrand	15	chr4	122968617	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-9.0742
chr4	62318891	62318908	protein_coding	Rgs3	utr3	ENSMUSG00000059810	ProperStrand	40	chr19	8798740	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	8	-20.3070
chr2	122266071	122266089	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr11	6428030	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-1.1098
chr2	25563070	25563086	antisense	A230005M16Rik	.	ENSMUSG00000087612	ProperStrand	103	chr11	62416605	62416657	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-4.1312
chr15	28216496	28216514	protein_coding	Dnahc5	intron	ENSMUSG00000022262	NonProperStrand	18	chr2	144087331	144087462	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	5	-19.6201
chr4	34630707	34634504	protein_coding	Slc35a1	exon	ENSMUSG00000028293	ProperStrand	9	chr18	35714144	35714246	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-7.1819
chrX	147523153	147523243	protein_coding	Fgd1	exon	ENSMUSG00000025265	ProperStrand	96	chr14	33005156	33005236	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-3.1282
chr13	74494656	74494673	protein_coding	Ccdc127	utr3	ENSMUSG00000021578	NonProperStrand	54	chr2	26493366	26493420	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-3.9396
chr17	24562142	24562240	protein_coding	Rnps1	utr3	ENSMUSG00000034681	ProperStrand	40	chr13	23618322	23618359	tRNA	tRNA948-ArgTCG	.	49665	ProperStrand	26	4	-inf
chr6	143429775	143429793	LINE	L1MA4	L1	chr6L1MA4143429728	ProperStrand	39	chr18	61856838	61856920	protein_coding	Pcyox1l	utr3	ENSMUSG00000024579	ProperStrand	15	2	-19.9824
chr5	135693569	135698984	protein_coding	Baz1b	exon	ENSMUSG00000002748	ProperStrand	83	chr10	23505162	23505279	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-4.0852
chr11	69481341	69481431	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	chr9	40612076	40612144	snoRNA	ENSMUSG00000075924_Snord14d	.	ENSMUSG00000075924	ProperStrand	131	3	-5.2106
chr6	85388848	85388865	protein_coding	Smyd5	exon	ENSMUSG00000033706	NonProperStrand	30	chr2	63936034	63936053	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-9.2550
chr6	72180855	72180872	protein_coding	Atoh8	intron	ENSMUSG00000037621	NonProperStrand	61	chr1	88247800	88247828	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-5.0648
chr1	63104886	63104986	protein_coding	Ino80d	exon	ENSMUSG00000040865	ProperStrand	70	chr16	23110466	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	20	-21.6977
chr6	124682504	124682847	protein_coding	Ptpn6	exon	ENSMUSG00000004266	ProperStrand	3	chr2	22445956	22446024	pseudogene	Gm13339	.	ENSMUSG00000082884	ProperStrand	24	1	-inf
chr14	70513829	70513848	protein_coding	Bin3	intron	ENSMUSG00000022089	ProperStrand	4	chr1	89673593	89673727	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-8.7610
chr10	60692417	60692433	protein_coding	Adamts14	exon	ENSMUSG00000059901	NonProperStrand	127	chr17	35089184	35089237	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-4.0462
chr19	30592362	30592378	LTR	RLTR27	ERVK	chr19RLTR2730592365	ProperStrand	1	chr5	141099390	141099451	protein_coding	Ttyh3	utr3	ENSMUSG00000036565	ProperStrand	22	1	-inf
chr18	62599340	62599358	protein_coding	Htr4	intron	ENSMUSG00000026322	NonProperStrand	5	chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	1	-14.3502
chr2	146877495	146887026	protein_coding	Xrn2	exon	ENSMUSG00000027433	ProperStrand	48	chr11	116704720	116704738	protein_coding	Jmjd6	utr5	ENSMUSG00000056962	ProperStrand	92	1	-12.9060
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr19	9044341	9044377	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	1	-3.3346
chr14	62950980	62950996	protein_coding	Rnaseh2b	exon	ENSMUSG00000021932	ProperStrand	4	chr19	46146541	46146655	protein_coding	Pprc1	intron	ENSMUSG00000055491	ProperStrand	143	2	-19.5953
chr14	65372766	65372828	snoRNA	ENSMUSG00000064442_SNORA36	.	ENSMUSG00000064442	ProperStrand	296	chr19	8800086	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	2	-7.4484
chr9	64023963	64025131	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	chr9	120039622	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	5	-2.4551
chr8	24169015	24169031	protein_coding	Ank1	utr5	ENSMUSG00000031543	ProperStrand	47	chr18	33954845	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-6.6726
chr10	128062280	128062335	protein_coding	Rps26	exon	ENSMUSG00000025362	ProperStrand	67	chr4	131908236	131908286	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-2.4279
chr2	75503203	75503321	protein_coding	Hnrnpa3	exon	ENSMUSG00000059005	ProperStrand	289	chr5	113259261	113259279	protein_coding	Myo18b	exon	ENSMUSG00000072720	ProperStrand	48	1	-10.6116
chr9	66247616	66247655	protein_coding	Herc1	exon	ENSMUSG00000038664	ProperStrand	81	chr4	131908689	131908715	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.8446
chr9	4299367	4302483	protein_coding	Aasdhppt	exon	ENSMUSG00000025894	ProperStrand	121	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-7.5264
chr11	120816767	120817196	protein_coding	Slc16a3	exon	ENSMUSG00000025161	ProperStrand	98	chr5	130300496	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.7111
chr2	165899852	165899952	protein_coding	Sulf2	utr3	ENSMUSG00000006800	ProperStrand	171	chr18	35714221	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	6	-10.9268
chr11	5895288	5895398	protein_coding	Camk2b	intron	ENSMUSG00000057897	ProperStrand	14	chr3	85944539	85944580	snoRNA	ENSMUSG00000064390_Rnu73b	.	ENSMUSG00000064390	ProperStrand	164	1	-14.2709
chr8	114492134	114492164	protein_coding	Adat1	utr3	ENSMUSG00000031949	ProperStrand	19	chr4	131866155	131866283	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	5	-20.1489
chr19	5138252	5138269	protein_coding	Pacs1	intron	ENSMUSG00000024855	NonProperStrand	13	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-13.8844
chr3	9692356	9692407	protein_coding	Pag1	utr3	ENSMUSG00000027508	ProperStrand	6	chr2	20889129	20889146	protein_coding	Arhgap21	utr5	ENSMUSG00000036591	NonProperStrand	4	1	-19.3129
chr9	78023109	78023150	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr9	66378063	66378102	protein_coding	Usp3	exon	ENSMUSG00000032376	ProperStrand	18	3	-18.1742
chr2	32819082	32819291	protein_coding	Rpl12	exon	ENSMUSG00000038900	ProperStrand	167	chrX	34622906	34622923	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-1.4786
chr11	78338409	78338426	protein_coding	Tnfaip1	utr3	ENSMUSG00000017615	ProperStrand	30	chr11	62416601	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-6.5327
chr15	103175749	103176438	protein_coding	Itga5	exon	ENSMUSG00000000555	ProperStrand	28	chr7	118219582	118219662	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-5.6481
chr15	59177782	59177833	protein_coding	E430025E21Rik	exon	ENSMUSG00000022350	ProperStrand	18	chr7	29136619	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.5789
chr7	25288639	25288723	protein_coding	Cadm4	utr3	ENSMUSG00000054793	ProperStrand	6	chr16	23110902	23111001	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-6.6757
chr4	153977456	153977474	antisense	Gm13134	.	ENSMUSG00000084987	ProperStrand	1	chr17	24857743	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-inf
chr10	79845266	79845283	protein_coding	Mex3d	exon	ENSMUSG00000048696	ProperStrand	14	chr7	29136525	29136575	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.0758
chr2	146125209	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	chr5	74489543	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-1.8331
chr1	74542429	74542497	protein_coding	Usp37	intron	ENSMUSG00000033364	ProperStrand	47	chr14	76247712	76247802	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-4.6383
chr2	147009105	147009122	protein_coding	Nkx2-2	utr3	ENSMUSG00000027434	NonProperStrand	84	chr19	8963023	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	6	-11.3128
chr18	32405206	32405222	protein_coding	Ercc3	exon	ENSMUSG00000024382	ProperStrand	280	chr11	57861295	57861311	protein_coding	Larp1	exon	ENSMUSG00000037331	ProperStrand	201	1	-7.8093
chr7	148341273	148341302	protein_coding	Ptdss2	exon	ENSMUSG00000025495	ProperStrand	29	chr11	69483136	69483226	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-9.3253
chr11	59631445	59631535	protein_coding	Cops3	utr3	ENSMUSG00000019373	ProperStrand	19	chr16	56035904	56035984	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	1	-11.2750
chr4	55362987	55363051	protein_coding	Rad23b	utr5	ENSMUSG00000028426	ProperStrand	86	chr19	22926636	22926662	protein_coding	Trpm3	intron	ENSMUSG00000052387	ProperStrand	54	1	-12.8044
chr1	53951917	53952007	protein_coding	Hecw2	intron	ENSMUSG00000042807	NonProperStrand	3	chr1	54581672	54581762	protein_coding	Pgap1	intron	ENSMUSG00000070889	NonProperStrand	4	1	-inf
chr15	84143141	84143202	protein_coding	Parvb	exon	ENSMUSG00000022438	NonProperStrand	6	chr8	113362430	113362466	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	NonProperStrand	1	1	-inf
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr4	131865855	131865986	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	28	-6.5354
chr5	4878880	4878897	protein_coding	Cdk14	intron	ENSMUSG00000028926	ProperStrand	20	chrX	34622906	34622984	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-5.2611
chr12	72053953	72053969	protein_coding	Actr10	exon	ENSMUSG00000021076	ProperStrand	21	chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	1	-12.2016
chr10	121050345	121050398	protein_coding	Xpot	exon	ENSMUSG00000034667	ProperStrand	35	chr11	74718952	74719009	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	1	-10.1112
chr4	117317933	117317957	protein_coding	Eri3	intron	ENSMUSG00000033423	ProperStrand	246	chr5	108336363	108336422	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-4.0915
chr8	3803147	3803203	misc_RNA	RNaseP_nuc	.	ENSMUSG00000088025	ProperStrand	328	chr19	31700515	31700532	protein_coding	Prkg1	intron	ENSMUSG00000052920	NonProperStrand	41	1	-10.6771
chr11	63885267	63885283	protein_coding	Cox10	exon	ENSMUSG00000042148	ProperStrand	21	chr1	89673592	89673635	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-5.2636
chr7	132810881	132811539	protein_coding	Gtf3c1	exon	ENSMUSG00000032777	ProperStrand	161	chr4	131908317	131908341	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-1.4006
chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	chr4	46508032	46508157	snoRNA	ENSMUSG00000064410_SNORA36	.	ENSMUSG00000064410	ProperStrand	133	1	-9.1671
chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	chr10	80640451	80640516	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-2.4466
chr7	51503462	51503548	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	1	-4.1634
chr12	87860870	87860886	protein_coding	Esrrb	utr3	ENSMUSG00000021255	ProperStrand	254	chr6	129491515	129491568	protein_coding	Gabarapl1	utr3	ENSMUSG00000030161	ProperStrand	9	1	-14.3089
chr14	55262587	55283843	protein_coding	Acin1	exon	ENSMUSG00000022185	ProperStrand	67	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	7	-5.1018
chr4	8793420	8793475	protein_coding	Chd7	exon	ENSMUSG00000041235	ProperStrand	80	chr15	79913288	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-3.0684
chr4	106873373	106873390	protein_coding	Tmem59	utr3	ENSMUSG00000028618	NonProperStrand	9	chr11	106362569	106362637	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-11.2794
chr4	43505802	43505897	protein_coding-noncoding	Ccdc107	utr5	ENSMUSG00000028461	ProperStrand	106	chr8	126077954	126077980	protein_coding	Gm20388	intron	ENSMUSG00000092329	ProperStrand	295	1	-8.9805
chr2	25100965	25101065	protein_coding	Ndor1	utr3	ENSMUSG00000006471	ProperStrand	8	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-9.9694
chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	chr6	71832638	71832687	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	2	-1.0358
chr1	95647024	95647040	protein_coding	Thap4	exon	ENSMUSG00000026279	NonProperStrand	4	chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	1	-14.9592
chr7	31512808	31512898	protein_coding	Tmem147	exon	ENSMUSG00000006315	ProperStrand	9	chr11	93816911	93817192	protein_coding	Nme2	utr5	ENSMUSG00000020857	ProperStrand	8	1	-18.7584
chr7	29136045	29136080	protein_coding	Rps16	exon	ENSMUSG00000037563	ProperStrand	191	chr8	108424395	108424413	protein_coding	Pskh1	utr5	ENSMUSG00000048310	NonProperStrand	4	1	-16.5916
chr9	65044377	65044468	snRNA	ENSMUSG00000075763_U5	.	ENSMUSG00000075763	ProperStrand	216	chr1	162967528	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	3	-4.0242
chr1	38078614	38078631	protein_coding	Eif5b	exon	ENSMUSG00000026083	ProperStrand	118	chr10	23505574	23505627	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-6.2103
chr16	23111795	23111836	protein_coding	Eif4a2	intron	ENSMUSG00000022884	ProperStrand	356	chr15	76433285	76433341	protein_coding	Cpsf1	exon	ENSMUSG00000034022	ProperStrand	127	2	-13.1300
chr12	81735139	81735178	protein_coding	Erh	utr3	ENSMUSG00000021131	ProperStrand	20	chr8	32260335	32260418	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	4	-20.2701
chr12	83442288	83442360	protein_coding	Sipa1l1	exon	ENSMUSG00000042700	ProperStrand	84	chr7	148634736	148634826	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-3.3626
chr1	162968212	162968280	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	NonProperStrand	2	chr11	69483136	69483194	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	NonProperStrand	35	1	-inf
chr2	25105896	25107254	protein_coding	Ndor1	exon	ENSMUSG00000006471	NonProperStrand	84	chr16	30067534	30067571	protein_coding	Hes1	utr3	ENSMUSG00000022528	ProperStrand	6	1	-17.3868
chr16	91624616	91624706	protein_coding	Gart	exon	ENSMUSG00000022962	ProperStrand	200	chr8	42484967	42486160	protein_coding	Frg1	exon	ENSMUSG00000031590	ProperStrand	4	2	-19.7978
chr1	85196219	85198716	pseudogene	Gm7609	.	ENSMUSG00000079457	ProperStrand	3	chr1	85323657	85323747	pseudogene	Gm2619	.	ENSMUSG00000091199	ProperStrand	1	1	-inf
chr10	57942399	57942489	protein_coding	Ranbp2	exon	ENSMUSG00000003226	ProperStrand	52	chr4	138907852	138907914	protein_coding	Mrto4	intron	ENSMUSG00000028741	ProperStrand	40	3	-21.4986
mmu-miR-6238	1	19	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr13	51743603	51743703	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-4.1677
chr14	58261864	58261983	protein_coding-noncoding	Xpo4	utr3	ENSMUSG00000021952	ProperStrand	2	chr16	23110989	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-inf
chr18	24665508	24665619	protein_coding	Rprd1a	exon	ENSMUSG00000040446	ProperStrand	21	chr7	54442576	54442676	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-11.8555
chr10	86459454	86459474	protein_coding	Stab2	intron	ENSMUSG00000035459	ProperStrand	2	chr1	39605591	39605632	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-14.8180
chr18	78019960	78020003	protein_coding	Atp5a1	exon	ENSMUSG00000025428	ProperStrand	254	chr11	95539390	95541055	protein_coding	Phb	exon	ENSMUSG00000038845	ProperStrand	126	4	-18.8936
chr13	9833553	9833667	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	5	-2.9321
chr5	54389948	54389964	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	chr12	80374408	80374425	protein_coding	Zfyve26	exon	ENSMUSG00000066440	ProperStrand	44	1	-11.4070
chr7	19591413	19591429	protein_coding	Irf2bp1	exon	ENSMUSG00000044030	NonProperStrand	81	chr4	131866614	131866675	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	2	-13.5257
chr7	52715170	52715198	protein_coding	Ftl1	utr5	ENSMUSG00000050708	ProperStrand	807	chr5	23358061	23358104	snoRNA	ENSMUSG00000093321_Snord93	.	ENSMUSG00000093321	ProperStrand	218	2	-9.0896
chr5	53212399	53212499	protein_coding	Zcchc4	utr3	ENSMUSG00000029179	ProperStrand	15	chr6	52589227	52589257	snoRNA	ENSMUSG00000064792_SNORA32	.	ENSMUSG00000064792	ProperStrand	151	4	-20.6970
chr18	35714257	35714292	lincRNA	Snhg4	intron	ENSMUSG00000090430	ProperStrand	270	chr6	30699867	30700550	protein_coding	Copg2	exon	ENSMUSG00000025607	ProperStrand	11	1	-13.7618
chrX	45920153	45920169	protein_coding	Zfp280c	exon	ENSMUSG00000036916	NonProperStrand	1	chr5	121655100	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-inf
chr13	113267786	113267803	protein_coding	Il6st	intron	ENSMUSG00000021756	NonProperStrand	3	chr2	32818190	32818537	protein_coding	Rpl12	exon	ENSMUSG00000038900	ProperStrand	167	1	-17.7165
chr5	59508047	59508065	LTR	ORR1B2-int	MaLR	chr5ORR1B2-int59507324	ProperStrand	2	chr2	130103751	130103795	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-15.9458
chr4	116826552	116827365	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	chr7	116664809	116664873	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-1.1161
chr1	27072833	27072923	LINE	L1Md_F2	L1	chr1L1Md_F227072230	NonProperStrand	1	chr7	107732408	107732488	protein_coding	Mrpl48	intron	ENSMUSG00000030706	NonProperStrand	2	1	-inf
chr15	25149596	25149614	LTR	ORR1B1	MaLR	chr15ORR1B125149275	NonProperStrand	1	chr3	89743807	89743878	protein_coding	Atp8b2	utr3	ENSMUSG00000060671	ProperStrand	140	1	-inf
chr4	140582179	140584267	protein_coding	Crocc	exon	ENSMUSG00000040860	ProperStrand	44	chr15	79908969	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-6.0822
chr10	126532147	126532163	protein_coding	Os9	utr3	ENSMUSG00000040462	NonProperStrand	28	chr11	97642952	97643072	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	4	-12.7708
chr2	69341482	69341552	protein_coding	Lrp2	exon	ENSMUSG00000027070	ProperStrand	35	chr7	116664819	116664909	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-8.7949
chr2	90235285	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr3	124814536	124814552	LTR	RMER20B	ERVK	chr3RMER20B124814314	NonProperStrand	1	1	-inf
chr8	75007783	75007873	protein_coding	Slc35e1	exon	ENSMUSG00000019731	ProperStrand	23	chr8	13876095	13876175	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-9.0725
chr4	129323706	129323767	protein_coding	Kpna6	utr3	ENSMUSG00000003731	ProperStrand	39	chr7	4745153	4745680	protein_coding	Rpl28	exon	ENSMUSG00000030432	ProperStrand	220	1	-11.5766
chr7	4583114	4583224	protein_coding	Ppp6r1	utr3	ENSMUSG00000052296	ProperStrand	20	chr10	23505152	23505177	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.0137
chr19	9079428	9079463	protein_coding	Ahnak	exon	ENSMUSG00000069833	ProperStrand	103	chr17	24857800	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-2.7284
chr11	55296223	55296276	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	chr18	74938226	74938316	snoRNA	ENSMUSG00000089235_SCARNA17	.	ENSMUSG00000089235	ProperStrand	1128	1	-1.0379
chr15	12251329	12251382	protein_coding	Golph3	utr5	ENSMUSG00000022200	ProperStrand	35	chr9	20702548	20702844	protein_coding	Eif3g	exon	ENSMUSG00000070319	ProperStrand	38	1	-15.3243
chr4	153410349	153410365	protein_coding	Ccdc27	exon	ENSMUSG00000039492	ProperStrand	94	chr9	120039533	120039622	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.5240
chr6	54579870	54579900	protein_coding	Plekha8	exon	ENSMUSG00000005225	ProperStrand	21	chr16	23111692	23111782	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.7491
chr11	5441763	5441781	protein_coding	Ccdc117	intron	ENSMUSG00000020482	NonProperStrand	20	chr7	116663660	116663760	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.5385
chr1	137285714	137285814	protein_coding	Ipo9	intron	ENSMUSG00000041879	ProperStrand	53	chr15	79913288	79913313	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-3.8230
chr1	155097021	155097094	protein_coding	Lamc1	exon	ENSMUSG00000026478	ProperStrand	239	chr4	57727889	57727906	protein_coding	Gm20459	intron	ENSMUSG00000089945	NonProperStrand	34	1	-11.6887
chr4	155366536	155366553	protein_coding	B3galt6	exon	ENSMUSG00000050796	ProperStrand	40	chr16	23110842	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.4886
chr14	61311040	61311140	protein_coding	Spata13	exon	ENSMUSG00000021990	ProperStrand	28	chr15	58783166	58783184	protein_coding	Mtss1	exon	ENSMUSG00000022353	NonProperStrand	51	1	-15.1799
chr12	21333974	21334984	protein_coding	Adam17	exon	ENSMUSG00000052593	ProperStrand	20	chr7	117166752	117166832	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	2	-11.3031
chr10	79316213	79316230	lincRNA	E130317F20Rik	exon	ENSMUSG00000091994	NonProperStrand	97	chr7	29136525	29136600	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-4.6094
chr5	136540823	136540913	SINE	B4A	B4	chr5B4A136540691	ProperStrand	1	chr5	136541019	136541109	SINE	PB1D10	Alu	chr5PB1D10136541012	ProperStrand	1	1	-inf
chr19	23786809	23786862	protein_coding	Ptar1	intron	ENSMUSG00000074925	ProperStrand	13	chr17	24857784	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	3	-12.3659
chr11	108619052	108619069	protein_coding	Ccdc46	exon	ENSMUSG00000020728	ProperStrand	14	chr17	29469470	29469520	protein_coding	Mtch1	utr3	ENSMUSG00000024012	ProperStrand	13	1	-19.5716
chr7	106752148	106752187	protein_coding	Arrb1	utr3	ENSMUSG00000018909	ProperStrand	46	chr10	80641693	80641731	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	2	-12.8999
chr7	52973506	52974684	protein_coding	Rpl18	exon	ENSMUSG00000059070	ProperStrand	116	chr14	76372298	76372388	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	1	-7.6740
chr15	88547473	88559824	protein_coding	Brd1	exon	ENSMUSG00000022387	ProperStrand	70	chr9	15119645	15119725	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.3660
chr12	66207269	66207295	protein_coding	Fancm	utr5	ENSMUSG00000055884	ProperStrand	16	chr12	110874223	110874292	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	2	-19.7050
chr7	29603451	29603541	protein_coding-noncoding	Hnrnpl	utr5	ENSMUSG00000015165	ProperStrand	23	chr9	62659137	62659217	protein_coding	Fem1b	utr5	ENSMUSG00000032244	ProperStrand	111	1	-14.0189
chr8	113574303	113574403	protein_coding	Aars	exon	ENSMUSG00000031960	ProperStrand	355	chr17	35384175	35384195	snoRNA	ENSMUSG00000065273_SNORD83	.	ENSMUSG00000065273	ProperStrand	244	1	-6.9556
chrX	103392235	103392281	protein_coding	Pgk1	exon	ENSMUSG00000062070	ProperStrand	484	chr2	26767600	26767898	protein_coding	Rpl7a	exon	ENSMUSG00000062647	ProperStrand	234	2	-10.3886
chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr11	6519808	6519929	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	3	-4.5178
chr16	34357475	34360910	protein_coding	Kalrn	exon	ENSMUSG00000061751	NonProperStrand	52	chr11	69483190	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.6966
chr17	45806911	45810112	protein_coding	Tmem63b	exon	ENSMUSG00000036026	ProperStrand	93	chr17	35299507	35299598	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-3.9442
chr9	45198928	45199653	protein_coding	Fxyd6	exon	ENSMUSG00000066705	NonProperStrand	108	chr14	33005085	33005139	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-2.9183
chr11	68813814	68813830	protein_coding	Pfas	exon	ENSMUSG00000020899	NonProperStrand	9	chr4	131908410	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.8019
chr18	35739276	35739334	protein_coding	Matr3	intron	ENSMUSG00000037236	ProperStrand	90	chr12	66234797	66237759	protein_coding	Mis18bp1	exon	ENSMUSG00000047534	ProperStrand	4	1	-18.4430
chr11	88842436	88842526	protein_coding	Coil	exon	ENSMUSG00000033983	ProperStrand	9	chr7	117166739	117166819	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-8.6357
chr11	115708945	115709577	protein_coding	Llgl2	exon	ENSMUSG00000020782	ProperStrand	62	chr10	110918549	110918629	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	4	-11.4132
chr2	68909484	68943073	protein_coding	Lass6	exon	ENSMUSG00000027035	ProperStrand	32	chr18	75160711	75160776	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	1	-10.4555
chr17	27767413	27769229	protein_coding	Rps10	exon	ENSMUSG00000052146	ProperStrand	94	chr1	162965560	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.4840
chr1	71341492	71341509	protein_coding	Abca12	exon	ENSMUSG00000050296	NonProperStrand	143	chr1	162967531	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-1.9708
chr14	26705955	26706038	protein_coding	Anxa11	utr3	ENSMUSG00000021866	ProperStrand	30	chr4	131908689	131908750	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.2894
chr2	41199972	41199989	protein_coding	Lrp1b	exon	ENSMUSG00000049252	ProperStrand	376	chr11	55296195	55296276	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	4	-9.5494
chr18	37673599	37673615	protein_coding	Pcdhb21	exon	ENSMUSG00000044022	NonProperStrand	23	chr4	137813143	137813162	protein_coding	Sh2d5	exon	ENSMUSG00000045349	NonProperStrand	31	1	-16.5018
chr15	85965808	85965897	protein_coding	Gramd4	utr3	ENSMUSG00000035900	ProperStrand	39	chr1	72758780	72760091	protein_coding	Rpl37a	exon	ENSMUSG00000046330	ProperStrand	94	1	-13.2775
chr1	162135064	162135108	protein_coding	Cacybp	intron	ENSMUSG00000014226	ProperStrand	39	chr4	131908689	131908788	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.8599
chr5	143667316	143668336	protein_coding	Actb	utr5	ENSMUSG00000029580	ProperStrand	446	chr2	153050783	153050799	protein_coding	Tspyl3	exon	ENSMUSG00000074671	ProperStrand	228	1	-6.6396
chr1	173165455	173166564	protein_coding	Ndufs2	exon	ENSMUSG00000013593	ProperStrand	32	chr4	131908689	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.1812
chr11	119142096	119142123	protein_coding	Gaa	intron	ENSMUSG00000025579	ProperStrand	149	chr6	125113036	125113199	protein_coding	Gapdh	exon	ENSMUSG00000057666	ProperStrand	356	1	-7.9276
chr14	76247735	76247826	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	NonProperStrand	16	chr11	69483136	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	NonProperStrand	35	2	-inf
chr1	96820613	96820703	LINE	L1Md_A	L1	chr1L1Md_A96818049	ProperStrand	1	chr10	23505197	23505277	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-inf
chr10	75386809	75388169	protein_coding	Mmp11	exon	ENSMUSG00000000901	ProperStrand	24	chr11	97642953	97643038	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	4	-13.5832
chr8	89366270	89384769	protein_coding	N4bp1	exon	ENSMUSG00000031652	ProperStrand	98	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	5	-17.1431
chr1	95602142	95602165	protein_coding	Thap4	exon	ENSMUSG00000026279	ProperStrand	10	chr9	64024529	64024567	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	1	-12.0245
chr4	56789617	56789656	protein_coding	Ikbkap	exon	ENSMUSG00000028431	ProperStrand	44	chr11	69481332	69481431	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	5	-15.8541
chr2	59697056	59697113	protein_coding	Wdsub1	intron	ENSMUSG00000026988	ProperStrand	3	chr7	116664846	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-8.6415
chr11	78382418	78405907	protein_coding	Nlk	intron	ENSMUSG00000017376	ProperStrand	26	chr10	23505149	23505254	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-12.1045
chr18	37673599	37673615	protein_coding	Pcdhb21	exon	ENSMUSG00000044022	NonProperStrand	23	chr1	162965530	162965554	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.0979
chr11	118270192	118272176	protein_coding	Cant1	exon	ENSMUSG00000025575	ProperStrand	22	chr1	176996776	176996793	protein_coding	Rgs7	exon	ENSMUSG00000026527	NonProperStrand	12	1	-19.2765
chr1	36891737	36990909	protein_coding	Tmem131	exon	ENSMUSG00000026116	ProperStrand	129	chr11	6428087	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-3.4327
chr12	81585343	81585396	protein_coding	Exd2	intron	ENSMUSG00000032705	ProperStrand	7	chr9	15130896	15130978	snoRNA	ENSMUSG00000077394_snoU2_19	.	ENSMUSG00000077394	ProperStrand	96	1	-16.7705
chr11	87614626	87614643	antisense	Gm11505	.	ENSMUSG00000085872	ProperStrand	37	chr6	70794802	70794820	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	1	-12.3982
chr10	41140757	41140773	protein_coding	Akd1	intron	ENSMUSG00000091415	ProperStrand	15	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-8.6280
chr7	13516178	13516207	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr4	56910496	56910618	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	4	-7.1513
chr16	77077278	77077307	protein_coding	Usp25	exon	ENSMUSG00000022867	ProperStrand	9	chr7	29136526	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	4	-18.5556
chr15	77597977	77597993	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr6	148303619	148303689	protein_coding	Rps4y2	exon	ENSMUSG00000063171	ProperStrand	47	1	-9.2985
chr12	70299111	70299128	protein_coding	1110034A24Rik	exon	ENSMUSG00000020973	ProperStrand	11	chr8	95505795	95505812	protein_coding	Slc6a2	exon	ENSMUSG00000055368	NonProperStrand	21	1	-18.6067
chr6	42543791	42543807	protein_coding	Fam115e	exon	ENSMUSG00000018656	NonProperStrand	64	chr17	45708509	45708527	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	1	-6.6021
chr2	131125038	131128942	protein_coding	Rnf24	utr3	ENSMUSG00000048911	ProperStrand	11	chr4	131865855	131865980	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-8.1386
chr11	87913128	87913145	processed_transcript	2210416O15Rik	.	ENSMUSG00000087498	ProperStrand	76	chr4	131865868	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.4149
chr18	37911790	37911806	protein_coding	Pcdhga9	intron	ENSMUSG00000023036	ProperStrand	245	chr9	40612881	40612921	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	1	-6.7420
chr11	6428059	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr13	21261553	21261592	tRNA	tRNA999-MetCAT	.	1545789	ProperStrand	63	1	-3.1043
chr5	138605859	138605946	protein_coding	Mcm7	utr3	ENSMUSG00000029730	ProperStrand	258	chr7	29136578	29136600	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-0.9656
chr17	35089229	35089296	processed_transcript	1110038B12Rik	.	ENSMUSG00000092203	NonProperStrand	3	chr2	122145710	122145880	protein_coding	Duox1	exon	ENSMUSG00000033268	ProperStrand	2	1	-inf
chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	chr7	52382237	52382314	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-4.2510
chr11	101321086	101321137	protein_coding	Vat1	utr3	ENSMUSG00000034993	ProperStrand	69	chr19	8800355	8800446	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-3.2742
chr2	118749017	118749033	protein_coding	Bahd1	utr3	ENSMUSG00000040007	NonProperStrand	4	chrX	34622906	34623014	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-8.6589
chr8	114365730	114365830	protein_coding	Cfdp1	exon	ENSMUSG00000031954	ProperStrand	32	chr2	130101261	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	4	-inf
chr1	15269490	15269580	LINE	L1_Mus3	L1	chr1L1_Mus315269120	ProperStrand	1	chrX	79528116	79528206	LTR	RLTR9E	ERVK	chrXRLTR9E79527799	ProperStrand	1	1	-inf
chr11	80121324	80121340	protein_coding	Rhbdl3	intron	ENSMUSG00000017692	NonProperStrand	12	chr2	105215063	105215082	protein_coding	0610012H03Rik	intron	ENSMUSG00000055312	ProperStrand	6	1	-19.9654
chr10	107448925	107448946	LINE	L1_Mus2	L1	chr10L1_Mus2107448767	ProperStrand	5	chr3	153574603	153574653	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	1	-14.8284
chr17	28004494	28004510	protein_coding	Uhrf1bp1	intron	ENSMUSG00000039512	ProperStrand	79	chrX	84483702	84483728	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-7.6996
chr7	152049144	152049244	protein_coding	Fgf4	utr3	ENSMUSG00000050917	ProperStrand	66	chr16	23111777	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.7539
chr2	3245375	3245429	protein_coding	Nmt2	utr3	ENSMUSG00000026643	ProperStrand	21	chr2	145076805	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	2	-15.5926
chr15	79748764	79748833	protein_coding	Cbx7	exon	ENSMUSG00000053411	ProperStrand	62	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-7.6620
chrX	40944841	40944857	protein_coding	Gm362	exon	ENSMUSG00000078320	ProperStrand	129	chr4	131865855	131865931	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.7419
chr8	127975871	127977231	protein_coding	Sipa1l2	exon	ENSMUSG00000001995	ProperStrand	37	chr18	35716715	35716805	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.0044
chr11	9030493	9030564	protein_coding	Upp1	intron	ENSMUSG00000020407	ProperStrand	73	chr4	131908689	131908708	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-4.5714
chr8	46126047	46126137	protein_coding	Fat1	exon	ENSMUSG00000070047	ProperStrand	306	chr15	5068453	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-2.9835
chr2	119123074	119123116	protein_coding	Vps18	exon	ENSMUSG00000034216	ProperStrand	21	chr17	88036125	88036142	protein_coding	Epcam	utr5	ENSMUSG00000045394	NonProperStrand	4	1	-20.6328
chr11	5441763	5441781	protein_coding	Ccdc117	intron	ENSMUSG00000020482	NonProperStrand	20	chr1	162966813	162966866	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	2	-13.5199
chr14	31378758	31378778	protein_coding	Tkt	exon	ENSMUSG00000021957	ProperStrand	160	chr18	35716684	35716782	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-1.6024
chr15	10648492	10648585	lincRNA	4930556M19Rik	exon	ENSMUSG00000092044	ProperStrand	1	chr16	23110555	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-inf
chr2	156093217	156098284	protein_coding	Phf20	exon	ENSMUSG00000038116	ProperStrand	60	chr7	28113238	28113267	protein_coding	Ltbp4	exon	ENSMUSG00000040488	ProperStrand	91	1	-12.4765
chr6	85593216	85601295	protein_coding	Alms1	exon	ENSMUSG00000063810	ProperStrand	37	chr16	23110530	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.3186
chr5	37667536	37667552	protein_coding	Crmp1	exon	ENSMUSG00000029121	ProperStrand	85	chrX	132673816	132673833	protein_coding	Bex4	intron	ENSMUSG00000047844	NonProperStrand	70	1	-12.3030
chr1	74747675	74747775	protein_coding	Ttll4	utr3	ENSMUSG00000033257	ProperStrand	24	chr16	23110911	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.3518
chr11	97642952	97643100	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	chr4	56910495	56910639	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	27	-4.0895
chr8	114354877	114364261	protein_coding	Cfdp1	exon	ENSMUSG00000031954	ProperStrand	32	chr4	131908770	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-3.9305
chr9	108943465	108943515	protein_coding	Shisa5	exon	ENSMUSG00000025647	ProperStrand	43	chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	1	-9.2624
chr14	8771594	8774559	protein_coding	Flnb	exon	ENSMUSG00000025278	ProperStrand	124	chr17	24665481	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-3.5680
chr12	69645292	69645309	LINE	Lx6	L1	chr12Lx669644677	NonProperStrand	1	chr16	23110901	23111010	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr7	112533562	112533579	protein_coding	Fam160a2	exon	ENSMUSG00000044465	ProperStrand	85	chr5	108334195	108334241	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	3	-10.0498
chr8	109430324	109432147	protein_coding	Cirh1a	exon	ENSMUSG00000041438	ProperStrand	40	chr7	116663722	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.2294
chr17	28726741	28726800	protein_coding	Srpk1	utr3	ENSMUSG00000004865	ProperStrand	61	chr16	23111777	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-7.3128
chr1	42755254	42755270	protein_coding	Pou3f3	exon	ENSMUSG00000045515	NonProperStrand	117	chr11	62416992	62417018	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-4.7439
chr17	25296587	25296603	protein_coding	Clcn7	exon	ENSMUSG00000036636	ProperStrand	94	chr11	98572311	98572392	snoRNA	ENSMUSG00000088169_SNORD124	.	ENSMUSG00000088169	ProperStrand	62	1	-12.3457
chr2	57090809	57090827	protein_coding	Gpd2	utr5	ENSMUSG00000026827	ProperStrand	93	chr2	91771603	91771797	protein_coding	Mdk	utr5	ENSMUSG00000027239	ProperStrand	56	1	-12.5714
chr5	142459852	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	chr2	113445884	113445904	protein_coding	Fmn1	intron	ENSMUSG00000044042	ProperStrand	17	1	-13.1811
chr16	23110460	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	chr11	116938557	116938751	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	23	-2.4736
chr9	44637163	44637202	protein_coding	Mll1	exon	ENSMUSG00000002028	ProperStrand	151	chr4	131866155	131866245	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	21	-20.4271
chr4	116883465	116883565	snRNA	ENSMUSG00000070237_U5	.	ENSMUSG00000070237	ProperStrand	154	chr10	127895517	127895568	tRNA	tRNA688-SerCGA	.	1126993	ProperStrand	71	1	-11.0831
chr17	80452937	80461027	protein_coding	Hnrpll	exon	ENSMUSG00000024095	ProperStrand	27	chr17	80668119	80668142	protein_coding	Dhx57	exon	ENSMUSG00000035051	ProperStrand	20	2	-19.1711
chr5	4921304	4921320	protein_coding-noncoding	Cdk14	utr3	ENSMUSG00000028926	ProperStrand	1	chr5	108334195	108334255	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-inf
chr5	74489202	74489323	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	NonProperStrand	6	chr9	121758795	121759309	protein_coding	Higd1a	exon	ENSMUSG00000038412	ProperStrand	10	1	-19.0093
chr15	98350274	98350312	protein_coding	2310037I24Rik	intron	ENSMUSG00000022992	ProperStrand	91	chr9	15119644	15119761	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	5	-9.7031
chr10	10673954	10673971	protein_coding	Grm1	intron	ENSMUSG00000019828	ProperStrand	38	chr8	129468766	129468869	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-5.2970
chr17	24869755	24869771	protein_coding	Rpl3l	utr5	ENSMUSG00000002500	NonProperStrand	56	chr5	151755616	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-7.8774
chr11	87240292	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	chr16	23111695	23111819	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-0.9938
chr6	117795659	117795676	protein_coding	Zfp637	exon	ENSMUSG00000059689	NonProperStrand	53	chr5	74489543	74489656	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	4	-13.0566
chr18	75528090	75528158	protein_coding	Smad7	utr5	ENSMUSG00000025880	ProperStrand	83	chr7	52381972	52382006	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	3	-13.9460
chr8	73155303	73155393	protein_coding	Gdf15	exon	ENSMUSG00000038508	ProperStrand	8	chr7	116663697	116663761	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-6.3908
mmu-miR-5100	4	20	miRNA	mmu-miR-5100	.	mmu-miR-5100	ProperStrand	132	chr19	8963027	8963165	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-2.1329
chr19	21886308	21886388	protein_coding	Tmem2	exon	ENSMUSG00000024754	ProperStrand	133	chr7	29136545	29136635	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.1523
chr10	127520394	127522639	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr11	62418049	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	5	-7.8216
chr19	57435752	57435769	protein_coding	Fam160b1	utr5	ENSMUSG00000033478	ProperStrand	49	chr10	23505559	23505614	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-7.9549
chr1	187225487	187225527	protein_coding	Eprs	exon	ENSMUSG00000026615	ProperStrand	149	chr12	92811862	92811951	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	1	-6.7614
chr17	24858074	24858155	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr3	85942722	85942776	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	1	-6.0880
chr11	23263975	23264075	protein_coding	Usp34	exon	ENSMUSG00000056342	ProperStrand	68	chr14	65372845	65372887	snoRNA	ENSMUSG00000064442_SNORA36	.	ENSMUSG00000064442	ProperStrand	296	8	-19.4338
chr7	24779190	24779213	SINE	ID_B1	B4	chr7ID_B124779183	NonProperStrand	54	chr9	121662196	121663364	protein_coding	Nktr	exon	ENSMUSG00000032525	ProperStrand	41	1	-14.2995
chr12	81741970	81741999	protein_coding	Erh	exon	ENSMUSG00000021131	ProperStrand	20	chr11	5180669	5180685	protein_coding	Znrf3	utr3	ENSMUSG00000041961	NonProperStrand	210	1	-13.0307
chr12	81275199	81275487	protein_coding	Actn1	exon	ENSMUSG00000015143	ProperStrand	128	chr7	54442768	54442834	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-8.2133
chr3	126436336	126436353	protein_coding	Camk2d	intron	ENSMUSG00000053819	NonProperStrand	20	chr2	130103751	130103781	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-10.6940
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr8	113568838	113569468	protein_coding	Aars	exon	ENSMUSG00000031960	ProperStrand	355	1	-2.9933
chr1	43590482	43590513	protein_coding	Nck2	exon	ENSMUSG00000066877	ProperStrand	21	chr14	76247722	76247839	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-6.2229
chr18	47077423	47077440	LTR	ORR1E	MaLR	chr18ORR1E47077373	ProperStrand	1	chr19	36908921	36909021	protein_coding	Tnks2	utr5	ENSMUSG00000024811	ProperStrand	133	1	-inf
chr19	60656487	60656550	protein_coding	2700078E11Rik	exon	ENSMUSG00000033417	ProperStrand	12	chr7	74189892	74189909	protein_coding	Adamts17	intron	ENSMUSG00000058145	NonProperStrand	73	1	-16.2152
chr5	151755616	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr2	118523413	118523430	protein_coding	Pak6	utr3	ENSMUSG00000074923	ProperStrand	3	1	-14.1035
chr5	74489437	74489464	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr8	74724703	74724720	protein_coding	Hsh2d	utr3	ENSMUSG00000062007	NonProperStrand	3	1	-11.9468
chr9	20885212	20885239	protein_coding	Raver1	exon	ENSMUSG00000010205	ProperStrand	69	chr16	23111733	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-3.1172
chr7	34946581	34948180	protein_coding	Uba2	exon	ENSMUSG00000052997	ProperStrand	165	chr7	29136587	29136654	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	11	-17.3113
chr9	62271923	62271947	protein_coding	Coro2b	intron	ENSMUSG00000041729	ProperStrand	7	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-12.9875
chr12	113844556	113845235	protein_coding	Inf2	exon	ENSMUSG00000037679	ProperStrand	12	chr2	118611946	118611962	protein_coding	Disp2	exon	ENSMUSG00000040035	NonProperStrand	204	1	-14.1491
chr8	14897193	14897248	protein_coding	Cln8	utr3	ENSMUSG00000026317	ProperStrand	5	chr2	158182211	158182233	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-10.1046
chr18	85165824	85165841	LINE	L1M2	L1	chr18L1M285165679	ProperStrand	1	chr11	6319170	6319197	protein_coding	Ppia	exon	ENSMUSG00000071866	ProperStrand	127	1	-inf
chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	chr6	115757837	115757859	protein_coding	Rpl32	exon	ENSMUSG00000057841	ProperStrand	137	1	-5.3596
chr3	153573543	153573594	snoRNA	ENSMUSG00000064731_Snord45b	.	ENSMUSG00000064731	ProperStrand	205	chr14	33005093	33005138	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-1.8450
chr7	116664811	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	chr12	110874223	110874290	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	10	-10.0213
chr10	98749782	98749862	DNA	MER45B	Tip100	chr10MER45B98749726	NonProperStrand	1	chr10	98750003	98750093	DNA	MER45B	Tip100	chr10MER45B98750011	NonProperStrand	1	1	-inf
chr1	188956322	188956343	protein_coding	Spata17	intron	ENSMUSG00000026611	ProperStrand	7	chr19	8963027	8963080	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-10.5877
chr15	102017505	102017524	protein_coding	Csad	exon	ENSMUSG00000023044	NonProperStrand	2	chr10	80329468	80329538	protein_coding	3110056O03Rik	utr3	ENSMUSG00000035206	ProperStrand	11	1	-21.3789
chr4	43505813	43505893	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr11	29593540	29593630	protein_coding	Rtn4	exon	ENSMUSG00000020458	ProperStrand	117	1	-1.9346
chr10	59544142	59544226	protein_coding	Ascc1	intron	ENSMUSG00000044475	ProperStrand	18	chr1	88252837	88252864	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	4	-20.2081
chr1	174435910	174435951	protein_coding	Tagln2	exon	ENSMUSG00000026547	ProperStrand	39	chr16	23110864	23110954	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.7347
chr12	81971132	81971190	protein_coding	4933426M11Rik	exon	ENSMUSG00000021133	ProperStrand	23	chr8	32260335	32260403	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-6.5150
chr11	121149265	121149331	protein_coding	Foxk2	exon	ENSMUSG00000039275	ProperStrand	38	chr8	98269959	98270047	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-6.4425
chr13	75987077	75987150	protein_coding	Glrx	utr3	ENSMUSG00000021591	ProperStrand	7	chr4	3762227	3762272	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	5	-18.9355
chr2	113673021	113673111	protein_coding	Arhgap11a	utr3	ENSMUSG00000041219	ProperStrand	47	chr4	131865856	131865936	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	5	-10.5872
chr18	76463935	76463956	protein_coding	Smad2	intron	ENSMUSG00000024563	NonProperStrand	4	chr5	138606382	138607230	protein_coding	Mcm7	exon	ENSMUSG00000029730	ProperStrand	258	2	-inf
chr6	70794801	70794819	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	2	-11.4050
chr13	19684241	19684257	protein_coding	Epdr1	utr3	ENSMUSG00000002808	ProperStrand	46	chr15	34370546	34370607	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-4.0455
chr14	27246058	27246158	protein_coding	Slmap	exon	ENSMUSG00000021870	ProperStrand	9	chr4	135327523	135329683	protein_coding	Myom3	exon	ENSMUSG00000037139	NonProperStrand	62	1	-17.1399
chr8	59991905	59992938	protein_coding	Hmgb2	exon	ENSMUSG00000054717	ProperStrand	184	chr4	131908236	131908332	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	5	-2.6448
chr12	99756958	99756975	protein_coding	Kcnk10	exon	ENSMUSG00000033854	NonProperStrand	37	chr5	108334195	108334240	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-5.7635
chr7	148417159	148417220	protein_coding	Phrf1	exon	ENSMUSG00000038611	ProperStrand	86	chr8	129468774	129468864	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	3	-9.1853
chr5	129409883	129409899	protein_coding	Rimbp2	intron	ENSMUSG00000029420	NonProperStrand	19	chr9	120038467	120038549	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.2199
chr3	26563204	26563222	protein_coding	Spata16	intron	ENSMUSG00000039335	NonProperStrand	10	chr6	131330343	131330408	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	ProperStrand	408	1	-13.1365
chr4	82560642	82560658	protein_coding	Frem1	exon	ENSMUSG00000059049	NonProperStrand	14	chr8	73419730	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-5.9313
chr11	69812780	69812870	protein_coding	Phf23	exon	ENSMUSG00000018572	ProperStrand	25	chr5	74489564	74489644	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	5	-inf
chr2	112202959	112202975	protein_coding	Slc12a6	utr3	ENSMUSG00000027130	NonProperStrand	72	chr16	33625246	33646649	protein_coding	Slc12a8	exon	ENSMUSG00000035506	ProperStrand	52	1	-13.2345
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr17	6232006	6232022	protein_coding	Tulp4	exon	ENSMUSG00000034377	NonProperStrand	265	1	-3.0907
chr13	69639390	69639480	protein_coding	Papd7	exon	ENSMUSG00000034575	ProperStrand	10	chr4	131908356	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.5892
chr3	123210904	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	chr17	23685733	23685772	tRNA	tRNA995-ArgCCT	.	1187952	ProperStrand	18	1	-4.2354
chr6	113724209	113724258	protein_coding	Atp2b2	exon	ENSMUSG00000030302	ProperStrand	14	chr19	8798502	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-8.1240
chr7	109343502	109343545	protein_coding	Nup98	utr5	ENSMUSG00000063550	ProperStrand	100	chr8	73419657	73419718	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.2440
chr4	137213549	137213649	protein_coding	Usp48	utr3	ENSMUSG00000043411	ProperStrand	135	chr9	120038609	120038674	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.6850
chr4	21606097	21606114	protein_coding	Prdm13	exon	ENSMUSG00000040478	ProperStrand	51	chr11	97740863	97740880	protein_coding	Fbxo47	utr5	ENSMUSG00000070336	ProperStrand	7	1	-18.1458
chr4	127033133	127033164	protein_coding	Gjb5	exon	ENSMUSG00000042357	ProperStrand	9	chr17	24857738	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	3	-14.0664
chr4	43505653	43505679	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr13	46789473	46792101	protein_coding	Nup153	exon	ENSMUSG00000021374	ProperStrand	69	1	-2.8219
chr8	86620452	86620472	protein_coding	Rfx1	utr3	ENSMUSG00000031706	ProperStrand	20	chr17	24857781	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	4	-14.0513
chr1	71341491	71341508	protein_coding	Abca12	exon	ENSMUSG00000050296	NonProperStrand	143	chr14	76247723	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	4	-9.2298
chr11	20125807	20125852	protein_coding	Rab1	utr3	ENSMUSG00000020149	ProperStrand	32	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-8.1826
chr8	72317697	72317853	protein_coding	Atp13a1	exon	ENSMUSG00000031862	ProperStrand	75	chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	2	-17.1293
chr8	97346794	97346875	protein_coding	Ciapin1	utr3	ENSMUSG00000031781	ProperStrand	24	chr18	35716809	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.8034
chr13	26690077	26690094	LINE	Lx3_Mus	L1	chr13Lx3_Mus26688735	NonProperStrand	1	chr17	27956602	27956644	protein_coding	D17Wsu92e	intron	ENSMUSG00000056692	NonProperStrand	11	1	-inf
chr8	108228551	108228568	protein_coding	E130303B06Rik	exon	ENSMUSG00000013155	NonProperStrand	6	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-13.6880
chr1	187198060	187230935	protein_coding	Eprs	exon	ENSMUSG00000026615	ProperStrand	149	chr7	116663634	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	4	-4.9975
chr10	66473679	66473759	LINE	L1Md_F3	L1	chr10L1Md_F366473673	NonProperStrand	3	chr14	34780865	34780955	protein_coding	Zfp488	utr3	ENSMUSG00000044519	ProperStrand	54	1	-inf
chr6	112689098	112689322	protein_coding	Srgap3	exon	ENSMUSG00000030257	NonProperStrand	208	chr16	38158093	38158172	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	1	-6.1829
chr19	43574890	43579066	protein_coding	Got1	exon	ENSMUSG00000025190	ProperStrand	32	chr11	6428047	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-7.3073
chr13	9833580	9833622	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr10	75837463	75837546	protein_coding	Pcnt	intron	ENSMUSG00000001151	ProperStrand	127	3	-8.7599
chr11	58747695	58750693	protein_coding	Rnf187	exon	ENSMUSG00000020496	ProperStrand	26	chr11	97642997	97643091	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	6	-inf
chr4	137068373	137068557	protein_coding	Hspg2	exon	ENSMUSG00000028763	NonProperStrand	18	chr10	23505151	23505196	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	NonProperStrand	45	1	-16.2967
chr18	10052131	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr8	125952546	125952564	protein_coding	Gm20388	intron	ENSMUSG00000092329	ProperStrand	295	1	-5.6479
chr11	42440243	42440259	protein_coding	Gabrb2	exon	ENSMUSG00000007653	ProperStrand	248	chr3	94975265	94975305	protein_coding	Sema6c	exon	ENSMUSG00000038777	ProperStrand	30	1	-11.8690
chr10	120833983	120833999	protein_coding	Gns	utr3	ENSMUSG00000034707	NonProperStrand	11	chr5	121655031	121655100	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-7.0917
chr14	8717181	8720070	protein_coding	Flnb	exon	ENSMUSG00000025278	ProperStrand	124	chr15	34370546	34370619	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-2.2695
chr7	52096726	52096742	protein_coding	Tbc1d17	exon	ENSMUSG00000038520	ProperStrand	20	chr4	131908688	131908718	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.0012
chr5	74489201	74489255	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr13	49218439	49218455	protein_coding	Wnk2	intron	ENSMUSG00000037989	NonProperStrand	67	1	-5.4062
chr2	121263434	121263457	protein_coding	Pdia3	utr3	ENSMUSG00000027248	ProperStrand	74	chr11	68715849	68716690	protein_coding	Rpl26	exon	ENSMUSG00000060938	ProperStrand	130	5	-19.6589
chr11	69481073	69481199	protein_coding	Eif4a1	exon	ENSMUSG00000059796	ProperStrand	108	chr1	162966812	162966867	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-5.1095
chr13	23647017	23647073	protein_coding	Hist1h1d	exon	ENSMUSG00000052565	ProperStrand	78	chr9	120039661	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.8481
chr5	138899614	138899704	protein_coding	Zfp157	utr3	ENSMUSG00000036898	ProperStrand	7	chr5	74489543	74489623	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-8.0767
chr11	115341623	115341639	protein_coding	Armc7	intron	ENSMUSG00000057219	ProperStrand	3	chr1	9932550	9932625	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-14.0920
chr5	135885339	135885429	protein_coding	Hip1	utr3	ENSMUSG00000039959	ProperStrand	30	chr4	131865887	131865967	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.9337
chr1	36864741	36864827	protein_coding	Tmem131	exon	ENSMUSG00000026116	ProperStrand	129	chr9	64023716	64023746	snoRNA	ENSMUSG00000064918_SNORD18	.	ENSMUSG00000064918	ProperStrand	370	1	-8.1379
chr11	94272403	94272420	protein_coding	Cacna1g	exon	ENSMUSG00000020866	ProperStrand	35	chr1	30868768	30869880	protein_coding	Phf3	exon	ENSMUSG00000048874	ProperStrand	102	1	-13.3354
chr15	76367063	76367119	protein_coding	Fbxl6	exon	ENSMUSG00000022559	ProperStrand	5	chr4	96412508	96412526	protein_coding	Gm12695	intron	ENSMUSG00000078639	ProperStrand	110	1	-17.3190
chr17	34096302	34096319	protein_coding	Vps52	exon	ENSMUSG00000024319	ProperStrand	9	chr4	131908810	131908862	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.5343
chr11	55301048	55302596	protein_coding	G3bp1	exon	ENSMUSG00000018583	ProperStrand	106	chr4	56910538	56910618	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	3	-11.7590
chr4	137707621	137707701	protein_coding	Eif4g3	exon	ENSMUSG00000028760	ProperStrand	42	chr8	73419657	73419747	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.7861
chr2	147011594	147011610	protein_coding	Nkx2-2	exon	ENSMUSG00000027434	ProperStrand	47	chr8	23287279	23287351	protein_coding	Ckap2	exon	ENSMUSG00000037725	ProperStrand	69	4	-inf
chr10	126503199	126503263	protein_coding	Cdk4	exon	ENSMUSG00000006728	ProperStrand	47	chr4	131865390	131865480	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-4.4660
chr16	37384897	37384913	protein_coding	Stxbp5l	utr5	ENSMUSG00000022829	ProperStrand	332	chr2	84903846	84903879	protein_coding	Tnks1bp1	exon	ENSMUSG00000033955	ProperStrand	23	1	-11.8257
chr11	97642976	97643066	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	chr13	21261543	21261589	tRNA	tRNA999-MetCAT	.	966735	ProperStrand	63	1	-2.3888
chr6	39812121	39812138	LTR	LTR33A_	ERVL	chr6LTR33A_39811993	NonProperStrand	12	chr3	68889150	68889238	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	12	-inf
chr5	145532319	145532394	protein_coding	Trrap	intron	ENSMUSG00000045482	ProperStrand	399	chr12	17552962	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-1.7070
chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	chr10	53260875	53261344	protein_coding	Mcm9	exon	ENSMUSG00000058298	NonProperStrand	16	1	-11.8933
chr11	68600307	68600372	protein_coding	Myh10	intron	ENSMUSG00000020900	ProperStrand	91	chr4	131866176	131866266	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	4	-10.1052
chr6	85396317	85396406	protein_coding	Smyd5	utr3	ENSMUSG00000033706	ProperStrand	107	chr7	29136595	29136631	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.4535
chr18	34165432	34165449	protein_coding	Epb4.1l4a	intron	ENSMUSG00000024376	NonProperStrand	6	chr4	134028890	134029249	protein_coding	Stmn1	exon	ENSMUSG00000028832	ProperStrand	54	1	-18.0957
chr4	45000187	45000204	protein_coding	Grhpr	exon	ENSMUSG00000035637	ProperStrand	35	chr4	3762227	3762291	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	1	-10.5754
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr5	145532326	145532393	protein_coding	Trrap	intron	ENSMUSG00000045482	ProperStrand	399	1	-2.3806
chr11	87861485	87861511	protein_coding	Srsf1	exon	ENSMUSG00000018379	ProperStrand	49	chrX	13269163	13269180	protein_coding	Cask	intron	ENSMUSG00000031012	ProperStrand	41	1	-14.5014
chr15	98398643	98398659	antisense	9330020H09Rik	.	ENSMUSG00000091050	ProperStrand	1	chr2	32832473	32832523	protein_coding	Slc2a8	exon	ENSMUSG00000026791	ProperStrand	26	1	-inf
chr5	74489209	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	1	-1.6570
chr9	40612859	40612906	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	chr8	129468780	129468870	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-1.2168
chr2	90235296	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	108734812	108734828	protein_coding	Slc7a6os	utr5	ENSMUSG00000033106	NonProperStrand	29	1	-5.8800
chr9	50816824	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	chr7	4945735	4945751	protein_coding	Zfp579	exon	ENSMUSG00000051550	ProperStrand	13	1	-14.9346
chr2	84886581	84886805	protein_coding	Ssrp1	exon	ENSMUSG00000027067	ProperStrand	118	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.1050
chr11	115935746	115937022	protein_coding	Unc13d	exon	ENSMUSG00000057948	ProperStrand	89	chr11	106362642	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-6.6218
chr2	32453170	32453186	protein_coding	St6galnac4	utr3	ENSMUSG00000079442	NonProperStrand	5	chr9	15119646	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-12.4515
chr4	151757043	151757061	protein_coding	Chd5	exon	ENSMUSG00000005045	ProperStrand	51	chr19	8963027	8963083	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.5507
chr15	79913288	79913352	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr13	49779667	49779807	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	6	-0.9188
chr9	78023165	78023192	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr17	25996060	25996076	protein_coding	Wdr90	exon	ENSMUSG00000073434	ProperStrand	91	1	-5.0655
chr6	92192085	92193834	protein_coding	Trh	utr3	ENSMUSG00000005892	ProperStrand	87	chr16	23110913	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	14	-12.8882
chr11	69481332	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	chr11	62418013	62418096	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	20	-2.1479
chr2	32779532	32779550	protein_coding	Fam129b	utr3	ENSMUSG00000026796	ProperStrand	22	chr2	158182206	158182278	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-6.9878
chr4	155135128	155135145	protein_coding	Atad3a	utr5	ENSMUSG00000029036	ProperStrand	28	chr9	60719914	60719930	protein_coding	Uaca	exon	ENSMUSG00000034485	ProperStrand	109	1	-13.6528
chr11	62416575	62416596	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr17	13112465	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	8	-11.4982
chr5	74489203	74489294	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr1	162967734	162967783	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	1	-2.7577
chr7	52632775	52636138	protein_coding	Snrnp70	utr5	ENSMUSG00000063511	ProperStrand	61	chr7	116664841	116664921	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.5204
chr16	6456240	6456257	Other	RMER1C	Other	chr16RMER1C6456169	ProperStrand	7	chr13	96100457	96100476	protein_coding	Zbed3	intron	ENSMUSG00000041995	ProperStrand	33	1	-18.3255
chr2	90235293	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	95698356	95698424	protein_coding	Dtymk	utr5	ENSMUSG00000026281	ProperStrand	34	1	-5.5655
chr11	81218458	81218474	protein_coding	Accn1	intron	ENSMUSG00000020704	NonProperStrand	228	chr11	6428128	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.0686
chr9	36360136	36360226	LTR	MERVL_2A-int	ERVL	chr9MERVL_2A-int36359969	NonProperStrand	1	chr9	36503029	36503119	protein_coding	Acrv1	intron	ENSMUSG00000032110	NonProperStrand	1	1	-inf
chr1	142759894	142759912	LINE	Lx8	L1	chr1Lx8142759629	ProperStrand	1	chr1	162966813	162966854	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-inf
chr4	134487122	134487138	protein_coding	Syf2	exon	ENSMUSG00000028821	ProperStrand	7	chr17	35087897	35087924	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-9.5701
chr17	34275358	34275448	protein_coding	H2-DMa	exon	ENSMUSG00000037649	ProperStrand	12	chr10	110918549	110918634	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-10.7631
chr2	32818803	32818942	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	chr9	64023252	64023330	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	3	-3.7007
chr13	63588736	63588755	protein_coding	Fancc	intron	ENSMUSG00000021461	ProperStrand	11	chr4	131908810	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.1344
chr1	165894601	165894652	protein_coding	BC055324	exon	ENSMUSG00000041406	ProperStrand	35	chr7	29136561	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.3165
chr4	140483057	140487993	protein_coding	Padi2	exon	ENSMUSG00000028927	ProperStrand	24	chr15	98350173	98350253	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	4	-19.5312
chr10	75864158	75864175	protein_coding	Pcnt	exon	ENSMUSG00000001151	ProperStrand	127	chr12	16830080	16830122	protein_coding	E2f6	intron	ENSMUSG00000057469	ProperStrand	6	1	-16.5488
chrX	72661761	72661781	protein_coding	Mtcp1	utr5	ENSMUSG00000090110	ProperStrand	19	chr2	158185634	158185653	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-8.7972
chr8	130221660	130221684	SINE	B4	B4	chr8B4130221484	ProperStrand	2	chr5	74489602	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	2	-inf
chr1	134014152	134014343	protein_coding	Cdk18	exon	ENSMUSG00000026437	ProperStrand	51	chr4	131908689	131908798	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-4.3105
chr7	26180609	26180628	protein_coding	Lipe	exon	ENSMUSG00000003123	ProperStrand	24	chr3	123210854	123210933	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-9.2067
chrX	111099960	111099978	LINE	L1_Mm	L1	chrXL1_Mm111099865	ProperStrand	5	chr4	122968600	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	3	-19.6440
chr2	26767738	26767767	protein_coding-noncoding	Rpl7a	utr5	ENSMUSG00000062647	ProperStrand	53	chr16	23109030	23109093	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-7.5292
chr7	87237142	87237214	protein_coding	Zfp710	utr3	ENSMUSG00000048897	ProperStrand	229	chr6	71832550	71832579	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-3.0835
chr5	65780765	65780824	protein_coding	Rpl9	exon	ENSMUSG00000047215	ProperStrand	113	chr7	116664795	116664885	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	6	-10.4080
chr17	35257406	35257460	protein_coding	Csnk2b	exon	ENSMUSG00000024387	ProperStrand	13	chr4	131908809	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.8088
chr10	110552593	110552683	SINE	B1_Mur1	Alu	chr10B1_Mur1110552585	NonProperStrand	1	chr10	110552475	110552565	SINE	ID_B1	B4	chr10ID_B1110552344	NonProperStrand	1	1	-inf
chr4	44036458	44036486	protein_coding	Clta	intron	ENSMUSG00000028478	NonProperStrand	1	chr18	35716787	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	NonProperStrand	45	1	-inf
chr3	96364718	96364764	protein_coding	Txnip	utr3	ENSMUSG00000038393	ProperStrand	172	chr3	108228259	108228275	protein_coding	Sars	utr3	ENSMUSG00000068739	NonProperStrand	200	1	-8.7888
chr17	56199149	56199184	protein_coding	Chaf1a	intron	ENSMUSG00000002835	ProperStrand	23	chr4	116862568	116862662	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	8	-19.6384
chr11	94277737	94277785	protein_coding	Cacna1g	exon	ENSMUSG00000020866	ProperStrand	35	chr8	63789397	63789413	protein_coding	Sh3rf1	intron	ENSMUSG00000031642	ProperStrand	50	1	-14.7721
chr2	89368461	89368480	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	chr18	35714145	35714290	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-1.0678
chrX	72343877	72343922	protein_coding	Dkc1	intron	ENSMUSG00000031403	ProperStrand	89	chr11	68887021	68887063	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	2	-5.8148
chr4	108278918	108278934	protein_coding	Orc1	exon	ENSMUSG00000028587	ProperStrand	161	chr11	106362642	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-5.4594
chr12	110888878	110888913	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr19	44188458	44188548	snoRNA	ENSMUSG00000077391_SNORA12	.	ENSMUSG00000077391	ProperStrand	506	1	-4.4796
chr15	58618686	58618711	protein_coding	Tmem65	exon	ENSMUSG00000062373	ProperStrand	7	chr19	8798507	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-15.3826
chr3	51262570	51262618	protein_coding	Naa15	exon	ENSMUSG00000063273	ProperStrand	34	chr2	26494708	26494759	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	3	-10.1338
chr11	81218458	81218474	protein_coding	Accn1	intron	ENSMUSG00000020704	NonProperStrand	228	chr11	106362566	106362635	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-4.7879
chr11	95594530	95594548	protein_coding	Zfp652	intron	ENSMUSG00000075595	ProperStrand	48	chr11	97642952	97643080	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.8600
chr8	96703152	96703739	protein_coding	Mt1	utr5	ENSMUSG00000031765	ProperStrand	92	chr3	153574574	153574606	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	1	-8.8178
chr7	52382097	52382197	protein_coding-noncoding	Rpl13a	utr3	ENSMUSG00000074129	ProperStrand	106	chr4	131908236	131908297	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.7009
chr15	44504363	44504382	protein_coding	Sybu	exon	ENSMUSG00000022340	NonProperStrand	28	chr2	70927899	70927916	protein_coding	Dcaf17	exon	ENSMUSG00000041966	NonProperStrand	89	1	-14.0684
chr7	133816127	133816217	protein_coding	Ccdc101	utr3	ENSMUSG00000030714	ProperStrand	3	chr4	131865868	131865948	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.6896
chr6	81908004	81908060	protein_coding	AW146020	exon	ENSMUSG00000035125	ProperStrand	34	chr5	143188037	143188874	protein_coding	Slc29a4	exon	ENSMUSG00000050822	ProperStrand	14	1	-17.4755
chr7	20281976	20282049	protein_coding	Apoe	exon	ENSMUSG00000002985	ProperStrand	231	chr11	6428087	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.0519
chr18	73693109	73693190	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr12	106269284	106269526	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	23	-9.6652
chr15	20790997	20791087	LINE	Lx3_Mus	L1	chr15Lx3_Mus20789443	ProperStrand	1	chr15	20791298	20791378	LINE	Lx3_Mus	L1	chr15Lx3_Mus20791116	NonProperStrand	1	1	-inf
chr2	104656949	104656969	Low_complexity	G-rich	Low_complexity	chr2G-rich104656917	NonProperStrand	2	chr1	39677545	39677562	protein_coding	Creg2	utr3	ENSMUSG00000050967	NonProperStrand	8	1	-19.9311
chr11	62416575	62416596	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr14	76247731	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-0.7131
chr8	73032234	73033232	protein_coding	2810422J05Rik	exon	ENSMUSG00000055553	ProperStrand	171	chr16	23110828	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	9	-1.7869
chr19	42016448	42016479	protein_coding	Zdhhc16	exon	ENSMUSG00000025157	ProperStrand	4	chr4	131908351	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-11.0940
chr13	41197848	41197864	protein_coding	Gcm2	utr3	ENSMUSG00000021362	ProperStrand	1	chr9	15118323	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-inf
chr13	74935955	74935973	protein_coding	Cast	intron	ENSMUSG00000021585	ProperStrand	7	chr11	106362567	106362636	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-11.8178
chr2	37325093	37327902	protein_coding	Rabgap1	exon	ENSMUSG00000035437	ProperStrand	20	chr4	131865950	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.6810
chr13	94482023	94482039	antisense	AW495222	.	ENSMUSG00000087334	ProperStrand	2	chr17	35138105	35138142	protein_coding	Vars	utr5	ENSMUSG00000007029	ProperStrand	121	1	-18.9403
chr9	21548752	21548768	protein_coding	Ldlr	exon	ENSMUSG00000032193	NonProperStrand	39	chr16	23110959	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.7347
chr2	25219462	25219663	protein_coding	Uap1l1	exon	ENSMUSG00000026956	ProperStrand	8	chr7	52381973	52382010	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-10.8292
chr2	29925963	29926039	protein_coding	Set	exon	ENSMUSG00000054766	ProperStrand	167	chr9	120039540	120039630	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.5989
chr3	90016883	90016943	protein_coding	Rps27	exon	ENSMUSG00000090733	ProperStrand	40	chr11	69483191	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.1638
chr16	33302938	33303018	LINE	L1Md_F2	L1	chr16L1Md_F233302673	NonProperStrand	1	chr16	33303047	33303137	LTR	MTB	MaLR	chr16MTB33303066	NonProperStrand	1	1	-inf
chr12	72932174	72996720	protein_coding	Daam1	utr5	ENSMUSG00000034574	NonProperStrand	15	chr16	90496812	90496899	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	2	-inf
chr12	111891541	111905109	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr11	69481351	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	5	-2.0089
mmu-miR-1949	6	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr10	90581096	90581172	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	3	-2.2493
chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	chr5	151755616	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	3	-7.1190
chr15	99254559	99254639	protein_coding	Nckap5l	exon	ENSMUSG00000023009	ProperStrand	51	chr4	131908299	131908389	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.6592
chr11	48615535	48615622	snoRNA	ENSMUSG00000064725_Snord96a	.	ENSMUSG00000064725	ProperStrand	89	chr19	8799855	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-4.1926
chr3	85942409	85942454	protein_coding	Rps3a	exon	ENSMUSG00000028081	ProperStrand	177	chr3	88715214	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-5.1095
chr5	62120143	62120233	LTR	ORR1A3-int	MaLR	chr5ORR1A3-int62119593	ProperStrand	1	chr5	123137627	123137717	protein_coding	P2rx7	intron	ENSMUSG00000029468	NonProperStrand	5	1	-inf
chr6	87603819	87603839	protein_coding	Aplf	exon	ENSMUSG00000030051	ProperStrand	7	chr8	73419657	73419757	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-12.0588
chr11	108783076	108783093	protein_coding	Axin2	utr5	ENSMUSG00000000142	NonProperStrand	81	chr2	92440278	92440296	protein_coding	Chst1	utr5	ENSMUSG00000027221	ProperStrand	17	1	-15.2788
chr9	15119327	15119427	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	chr13	23523319	23523357	tRNA	tRNA102-AlaAGC	.	702675	ProperStrand	6	1	-9.8106
chr12	70474228	70474269	protein_coding	Arf6	exon	ENSMUSG00000044147	ProperStrand	32	chr9	64143807	64143875	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	4	-25.9550
chr7	35983752	35983768	protein_coding	Slc7a10	exon	ENSMUSG00000030495	NonProperStrand	33	chr19	8799022	8799063	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-7.0185
chr1	53813317	53813379	protein_coding	Stk17b	utr3	ENSMUSG00000026094	ProperStrand	6	chr4	131866206	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	3	-18.7349
chr16	37777390	37777408	protein_coding	Fstl1	exon	ENSMUSG00000022816	ProperStrand	179	chr1	71625296	71625361	protein_coding	Atic	utr3	ENSMUSG00000026192	ProperStrand	30	1	-12.5223
chr9	44524606	44524622	protein_coding	Phldb1	exon	ENSMUSG00000048537	ProperStrand	17	chr14	33005080	33005139	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-6.4617
chr2	97818106	97818123	LTR	MTE2a	MaLR	chr2MTE2a97818097	ProperStrand	24	chr11	48615536	48615598	snoRNA	ENSMUSG00000064725_Snord96a	.	ENSMUSG00000064725	ProperStrand	89	1	-14.3770
chr9	58082227	58082288	protein_coding	Pml	exon	ENSMUSG00000036986	ProperStrand	45	chr2	158182156	158182184	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-5.5634
chr19	10059066	10059166	protein_coding	Fth1	exon	ENSMUSG00000024661	ProperStrand	75	chr1	89673717	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-2.8636
chr2	167836657	167836685	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	chr4	45831888	45831905	protein_coding	Igfbpl1	intron	ENSMUSG00000035551	NonProperStrand	15	1	-14.9506
chr8	91343853	91343872	DNA	Charlie10	MER1_type	chr8Charlie1091343828	ProperStrand	23	chr17	29295503	29295558	protein_coding	Cpne5	utr3	ENSMUSG00000024008	ProperStrand	4	1	-19.3474
chr1	181476980	181476996	protein_coding	Cnst	intron	ENSMUSG00000038949	ProperStrand	40	chr11	116938680	116938749	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-6.9638
chr5	87354839	87354855	protein_coding	Ugt2b1	exon	ENSMUSG00000035836	ProperStrand	26	chr17	35087897	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-6.8539
chr17	26228952	26229042	protein_coding	Nme4	utr3	ENSMUSG00000024177	ProperStrand	9	chr9	120037969	120038049	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-8.5211
chr6	110065210	110065230	LINE	L1MDa	L1	chr6L1MDa110065111	NonProperStrand	1	chr5	121655099	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-inf
chr14	45949538	45949554	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	chr17	56761524	56761545	protein_coding	Lonp1	exon	ENSMUSG00000041168	ProperStrand	83	1	-9.2707
chr2	55288889	55288906	protein_coding	Kcnj3	utr5	ENSMUSG00000026824	ProperStrand	6	chr5	118477951	118477967	protein_coding	Tesc	exon	ENSMUSG00000029359	ProperStrand	114	1	-16.7307
chr1	164569797	164569813	protein_coding	Myoc	exon	ENSMUSG00000026697	ProperStrand	7	chr15	79908972	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-9.8509
chr3	152450610	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	chr2	32818818	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	5	-7.9525
chr15	82684888	82684986	protein_coding	Tcf20	exon	ENSMUSG00000041852	ProperStrand	658	chr9	15118341	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	3	-1.0310
chr19	10823569	10823587	protein_coding	A430093F15Rik	intron	ENSMUSG00000067577	NonProperStrand	34	chr5	115260020	115260038	protein_coding	1500011B03Rik	intron	ENSMUSG00000072694	ProperStrand	3	1	-21.0165
chr13	103895241	103895257	protein_coding	Mast4	intron	ENSMUSG00000034751	ProperStrand	150	chr17	39985543	39985656	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-4.1639
chr15	77591865	77591922	protein_coding	Myh9	utr3	ENSMUSG00000022443	ProperStrand	570	chrX	40944841	40944857	protein_coding	Gm362	exon	ENSMUSG00000078320	ProperStrand	129	1	-7.2813
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr5	130295414	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	8	-3.3084
chr7	30231524	30231593	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	chr9	32068016	32068106	protein_coding	Arhgap32	exon	ENSMUSG00000041444	ProperStrand	37	1	-9.8197
chr5	4757683	4757699	protein_coding	Fzd1	utr5	ENSMUSG00000044674	NonProperStrand	4	chr19	9051808	9051876	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	2	-inf
chr15	79728363	79728600	protein_coding	Apobec3	exon	ENSMUSG00000009585	ProperStrand	14	chr4	131908357	131908410	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.9265
chr7	3597008	3608487	protein_coding	Cnot3	exon	ENSMUSG00000035632	ProperStrand	55	chr7	116664809	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	4	-9.5957
chr7	121361159	121361176	protein_coding	Copb1	exon	ENSMUSG00000030754	NonProperStrand	3	chr9	120039533	120039587	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-9.5119
chr11	62416575	62416638	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	NonProperStrand	13	chr4	122970476	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	NonProperStrand	6	3	-19.7152
chr3	103545891	103545938	protein_coding	Hipk1	utr3	ENSMUSG00000008730	ProperStrand	23	chr16	93901205	93901223	protein_coding	Chaf1b	exon	ENSMUSG00000022945	ProperStrand	28	2	-18.9184
chr19	43929527	43929549	protein_coding	Dnmbp	exon	ENSMUSG00000025195	ProperStrand	15	chr8	98269959	98270059	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-8.3205
chr2	165879972	165880072	protein_coding	Ncoa3	exon	ENSMUSG00000027678	ProperStrand	58	chr5	23827990	23828036	protein_coding	Kcnh2	exon	ENSMUSG00000038319	ProperStrand	242	1	-10.5853
chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	chr9	21725590	21725607	protein_coding	Tmem205	exon	ENSMUSG00000040883	NonProperStrand	1	1	-inf
chr4	49599830	49599920	protein_coding	2810432L12Rik	exon	ENSMUSG00000039611	ProperStrand	3	chr7	148634716	148634796	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-10.2358
chr10	80109177	80110471	protein_coding	Btbd2	exon	ENSMUSG00000003344	ProperStrand	68	chr13	55749069	55751791	protein_coding	Ddx46	exon	ENSMUSG00000021500	ProperStrand	87	9	-18.9617
chr16	90268857	90268879	protein_coding	Scaf4	intron	ENSMUSG00000022983	ProperStrand	44	chr11	97643001	97643091	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	4	-10.4754
chr13	23830725	23830764	protein_coding	Hist1h1c	exon	ENSMUSG00000036181	ProperStrand	99	chr13	49779716	49779755	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-6.0240
chrX	140765503	140765594	protein_coding	Alg13	intron	ENSMUSG00000041718	ProperStrand	45	chr9	15119646	15119741	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	7	-19.6584
chr4	149656035	149656135	protein_coding	Rere	utr5	ENSMUSG00000039852	ProperStrand	76	chr7	117166809	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-4.3632
chr13	51743577	51743705	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	chr18	33954817	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	23	-15.2846
chr15	10390900	10390981	protein_coding	Dnajc21	exon	ENSMUSG00000044224	ProperStrand	17	chr1	162967515	162967566	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-5.9112
chr1	72206080	72206180	protein_coding	Mreg	utr3	ENSMUSG00000039395	ProperStrand	63	chr15	79913288	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-3.5022
chr15	36930606	36930660	protein_coding	Zfp706	utr3	ENSMUSG00000062397	ProperStrand	6	chr2	26494708	26494808	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-7.6788
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr11	67167096	67167112	protein_coding	Myh13	exon	ENSMUSG00000060180	ProperStrand	145	1	-6.0479
chr16	9993997	9994013	protein_coding	Grin2a	intron	ENSMUSG00000059003	ProperStrand	10	chr4	131865855	131865930	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.0395
chr18	56746935	56746987	protein_coding	Phax	utr3	ENSMUSG00000008301	ProperStrand	22	chr16	17894461	17894477	protein_coding	Tssk1	exon	ENSMUSG00000041566	NonProperStrand	62	1	-15.2803
chr10	110918676	110918695	protein_coding	Nap1l1	intron	ENSMUSG00000058799	ProperStrand	185	chr2	32818888	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	2	-5.6952
chr11	86348958	86358173	protein_coding	Rps6kb1	exon	ENSMUSG00000020516	ProperStrand	16	chr1	52901919	52901937	protein_coding	Hibch	utr5	ENSMUSG00000041426	ProperStrand	9	2	-22.4073
chr4	49073139	49073156	protein_coding	E130309F12Rik	intron	ENSMUSG00000063446	NonProperStrand	8	chr17	35089181	35089228	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-9.5771
chr2	179652799	179652845	protein_coding	Taf4a	intron	ENSMUSG00000039117	ProperStrand	15	chr17	13112557	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-7.3293
chr8	73932826	73932843	protein_coding	Ankle1	exon	ENSMUSG00000046295	NonProperStrand	2	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-15.2057
chr4	136101981	136101997	protein_coding	Luzp1	utr3	ENSMUSG00000001089	NonProperStrand	47	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-9.0834
chr4	112167933	112167954	LINE	L1_Mus1	L1	chr4L1_Mus1112167159	ProperStrand	1	chr18	33954836	33954936	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-inf
chr3	51059339	51059439	protein_coding	Elf2	utr3	ENSMUSG00000037174	ProperStrand	21	chr15	79913288	79913313	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-5.6139
chr7	82755597	82755616	protein_coding	Akap13	exon	ENSMUSG00000066406	ProperStrand	80	chr19	8963084	8963174	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.8098
chr5	136206832	136207046	protein_coding	Por	exon	ENSMUSG00000005514	ProperStrand	42	chr11	82742942	82743022	protein_coding	Unc45b	exon	ENSMUSG00000018845	ProperStrand	11	4	-20.6118
chr10	62085931	62085947	protein_coding	Ddx50	intron	ENSMUSG00000020076	ProperStrand	3	chr17	29018077	29018093	protein_coding	Pnpla1	exon	ENSMUSG00000043286	NonProperStrand	22	1	-inf
chr11	62101871	62101903	protein_coding	Ttc19	intron	ENSMUSG00000042298	ProperStrand	21	chr4	131908688	131908750	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-7.6158
chr1	190267301	190267317	protein_coding	Ush2a	exon	ENSMUSG00000026609	NonProperStrand	60	chr3	108357525	108357563	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-4.5400
chr9	70960077	70960093	protein_coding	Aqp9	exon	ENSMUSG00000032204	NonProperStrand	118	chr10	119888947	119888963	protein_coding	Hmga2	intron	ENSMUSG00000056758	NonProperStrand	6	1	-16.6471
chr14	51409366	51409422	protein_coding	Ccnb1ip1	utr3	ENSMUSG00000071470	ProperStrand	1	chr2	26768368	26768437	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-inf
chr7	30029823	30029855	protein_coding	Yif1b	exon	ENSMUSG00000030588	ProperStrand	154	chr11	97642952	97642977	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-2.0519
chr10	77462904	77463460	protein_coding	Pfkl	exon	ENSMUSG00000020277	ProperStrand	179	chr11	106362340	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-3.7480
chr2	130101266	130101323	protein_coding	Nop56	intron	ENSMUSG00000027405	ProperStrand	125	chr2	130101241	130101265	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-5.1529
chr4	43505767	43505847	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr15	73411142	73411232	protein_coding	Slc45a4	utr3	ENSMUSG00000079020	ProperStrand	127	1	-1.8058
chr16	11144137	11144227	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr7	52378398	52378454	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	NonProperStrand	1	1	-inf
chr7	120694611	120694771	protein_coding	Far1	exon	ENSMUSG00000030759	ProperStrand	72	chr15	98350146	98350183	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	3	-10.5833
chr18	36961593	36961663	misc_RNA	Vault	.	ENSMUSG00000065145	ProperStrand	177	chr16	23110454	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	6	-7.3236
chr6	144958598	144958617	protein_coding	Bcat1	exon	ENSMUSG00000030268	ProperStrand	49	chr4	116827119	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-7.4439
chr6	28801238	28801328	protein_coding	Snd1	intron	ENSMUSG00000001424	ProperStrand	210	chr6	47769693	47769773	protein_coding	Zfp786	exon	ENSMUSG00000051499	ProperStrand	2	1	-19.2892
chr11	77996558	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	chr4	116827169	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-0.7394
chr7	151765212	151765228	antisense	Gm10574	.	ENSMUSG00000073778	ProperStrand	357	chr11	30008927	30008944	protein_coding	Spnb2	utr3	ENSMUSG00000020315	ProperStrand	103	1	-8.6580
chr8	26827320	26827337	protein_coding	Whsc1l1	utr3	ENSMUSG00000054823	NonProperStrand	17	chr5	108334195	108334322	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-7.3226
chr19	10269896	10270017	protein_coding	Fads1	utr3	ENSMUSG00000010663	ProperStrand	21	chr11	106516093	106516113	protein_coding	Pecam1	utr3	ENSMUSG00000020717	ProperStrand	56	1	-15.5742
chr8	112738611	112738691	DNA	Charlie21a	MER1_type	chr8Charlie21a112738465	NonProperStrand	1	chr8	112738876	112738966	DNA	Charlie21a	MER1_type	chr8Charlie21a112738847	NonProperStrand	1	1	-inf
chr17	13871727	13871746	protein_coding	Tcte2	intron	ENSMUSG00000038347	ProperStrand	21	chr9	7933176	7933249	protein_coding	Yap1	utr3	ENSMUSG00000053110	NonProperStrand	7	1	-21.4650
chr4	133090415	133090437	protein_coding	Nudc	exon	ENSMUSG00000028851	ProperStrand	80	chr8	73419683	73419783	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.6221
chr13	76341035	76341055	protein_coding	Fam81b	intron	ENSMUSG00000078966	NonProperStrand	220	chr15	79908958	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-3.0281
chr19	14801540	14801556	SINE	B4	B4	chr19B414801528	ProperStrand	1	chr7	29136079	29137200	protein_coding	Rps16	exon	ENSMUSG00000037563	ProperStrand	191	1	-inf
chr5	122854212	122854229	protein_coding	Arpc3	exon	ENSMUSG00000029465	NonProperStrand	33	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-10.1313
chr4	139086491	139087606	protein_coding	Iffo2	utr5	ENSMUSG00000041025	NonProperStrand	3	chr13	9423994	9424084	protein_coding	Dip2c	intron	ENSMUSG00000048264	NonProperStrand	51	1	-inf
chr12	45485519	45485542	protein_coding	Nrcam	intron	ENSMUSG00000020598	NonProperStrand	11	chr14	33005139	33005237	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-7.3533
chr9	50461732	50461774	protein_coding	Dlat	exon	ENSMUSG00000000168	ProperStrand	26	chr18	33954850	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	5	-19.8866
chr11	51414967	51416134	protein_coding	Hnrnpab	exon	ENSMUSG00000020358	ProperStrand	124	chr16	18240811	18240878	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	2	-12.2724
chr6	115757992	115758130	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr3	108357255	108357459	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	14	-4.0817
chr1	191478725	191478825	protein_coding	Cenpf	exon	ENSMUSG00000026605	ProperStrand	44	chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	1	-9.3864
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr1	42755254	42755270	protein_coding	Pou3f3	exon	ENSMUSG00000045515	NonProperStrand	117	1	-8.0339
chr18	16933117	16966848	protein_coding	Cdh2	exon	ENSMUSG00000024304	ProperStrand	71	chr4	131908708	131908751	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.0037
chr14	39182647	39182666	protein_coding-noncoding	Nrg3	utr3	ENSMUSG00000041014	NonProperStrand	30	chr17	13115655	13115768	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	17	-19.3089
chr2	32818540	32819051	protein_coding	Rpl12	exon	ENSMUSG00000038900	ProperStrand	167	chr13	49779747	49779802	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	4	-15.5091
chr18	12311309	12311480	protein_coding	Riok3	exon	ENSMUSG00000024404	ProperStrand	38	chr1	162967534	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	4	-13.9459
chr10	114777830	114777861	protein_coding	Tmem19	utr3	ENSMUSG00000069520	ProperStrand	24	chr9	120039608	120039678	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-5.0594
chr2	152151959	152152009	protein_coding	Rbck1	exon	ENSMUSG00000027466	ProperStrand	30	chr3	89009743	89009759	protein_coding	Gba	exon	ENSMUSG00000028048	NonProperStrand	88	1	-13.9447
chr17	44872633	44872649	protein_coding	Runx2	utr5	ENSMUSG00000039153	NonProperStrand	13	chr2	26494708	26494829	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-6.0562
chr17	26417129	26417246	protein_coding	Luc7l	utr3	ENSMUSG00000024188	ProperStrand	15	chrX	84483703	84483736	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	2	-17.5075
chr15	81110991	81111009	SINE	ID4	ID	chr15ID481110956	ProperStrand	272	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-2.9645
chr9	110845705	110848329	protein_coding	Tdgf1	exon	ENSMUSG00000032494	ProperStrand	218	chr11	77995189	77995236	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-3.7049
chr5	100815169	100815215	protein_coding	Sec31a	exon	ENSMUSG00000035325	ProperStrand	61	chr7	116664796	116664886	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-4.4433
chr19	44380793	44380812	protein_coding	Scd2	utr3	ENSMUSG00000025203	ProperStrand	219	chr5	74489595	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-1.5683
chr4	43505656	43505683	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr8	4328782	4328827	protein_coding	Ccl25	intron	ENSMUSG00000023235	ProperStrand	10	1	-6.5547
chr8	122475874	122475893	protein_coding	Usp10	exon	ENSMUSG00000031826	NonProperStrand	4	chr11	62416599	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-10.7841
chr15	81205249	81208120	protein_coding	St13	exon	ENSMUSG00000022403	ProperStrand	59	chr4	131865855	131865928	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.7940
chr1	20552541	20552557	protein_coding	Pkhd1	exon	ENSMUSG00000043760	NonProperStrand	49	chr7	87226447	87226522	protein_coding	Zfp710	exon	ENSMUSG00000048897	ProperStrand	229	1	-11.0358
chr10	80797342	80797358	protein_coding	Tbxa2r	exon	ENSMUSG00000034881	NonProperStrand	40	chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-8.5524
chr17	56924805	56926068	protein_coding	Rfx2	exon	ENSMUSG00000024206	ProperStrand	32	chr10	23505157	23505257	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	7	-16.4114
chr7	135123472	135123701	protein_coding	Fus	exon	ENSMUSG00000030795	ProperStrand	162	chr17	35088957	35088997	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-3.9577
chr2	9837893	9837993	protein_coding	Taf3	utr3	ENSMUSG00000025782	ProperStrand	62	chr10	90644840	90644903	tRNA	tRNA856-AspGTC	.	31816	ProperStrand	65	1	-13.0876
chr2	28682142	28682208	protein_coding	Gtf3c4	utr3	ENSMUSG00000035666	ProperStrand	14	chr10	23505152	23505213	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.6795
chr13	59737808	59737847	protein_coding	Golm1	utr3	ENSMUSG00000021556	ProperStrand	27	chr11	69481366	69481456	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-7.8290
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr3	79335590	79335683	protein_coding	Fnip2	intron	ENSMUSG00000061175	ProperStrand	45	2	-8.2816
chr12	110888878	110888909	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr2	158182156	158182192	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	2	-2.0469
chr3	109858010	109858028	protein_coding	Ntng1	intron	ENSMUSG00000059857	ProperStrand	25	chr1	88247814	88247835	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-6.8271
chr4	140273095	140273554	protein_coding	Rcc2	exon	ENSMUSG00000040945	ProperStrand	228	chr12	31943844	31943934	snoRNA	ENSMUSG00000065200_SNORA65	.	ENSMUSG00000065200	ProperStrand	19	1	-12.9706
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr6	115757992	115758117	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-0.7781
chr9	48707950	48707967	protein_coding	Htr3a	exon	ENSMUSG00000032269	NonProperStrand	20	chr1	130083481	130087296	protein_coding	R3hdm1	exon	ENSMUSG00000056211	ProperStrand	43	1	-16.2157
chr1	127491938	127491955	protein_coding	Slc35f5	utr3	ENSMUSG00000026342	ProperStrand	70	chr1	3661500	3661517	protein_coding	Xkr4	utr5	ENSMUSG00000051951	ProperStrand	59	1	-13.0377
chr18	48207224	48207255	protein_coding	Gm5506	exon	ENSMUSG00000059040	ProperStrand	105	chr16	23110455	23110518	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.5649
chr4	126117870	126117887	protein_coding	Eif2c1	intron	ENSMUSG00000041530	ProperStrand	30	chr1	102076758	102076790	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	1	-10.8346
chr4	68288052	68288075	LINE	Lx2A1	L1	chr4Lx2A168287900	ProperStrand	1	chr16	23111386	23111442	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-inf
chr13	49779667	49779737	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	chr17	23687227	23687264	tRNA	tRNA994-ArgCCG	.	135126	ProperStrand	60	2	-11.2879
chr1	140860557	140860574	protein_coding	Dennd1b	intron	ENSMUSG00000056268	ProperStrand	23	chr10	67010627	67010716	protein_coding	Ado	utr3	ENSMUSG00000057134	ProperStrand	7	1	-19.1569
chr18	64700007	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	2	-2.4627
chr5	99443584	99443601	protein_coding	Prkg2	intron	ENSMUSG00000029334	NonProperStrand	57	chr5	108336363	108336406	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-4.9801
chr7	52958453	52958469	protein_coding	Car11	exon	ENSMUSG00000003273	NonProperStrand	250	chr3	108357516	108357536	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-1.9890
chr2	172825855	172825871	protein_coding	Rae1	utr5	ENSMUSG00000027509	NonProperStrand	44	chr10	110918596	110918686	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-4.0267
chr12	17554764	17554794	protein_coding	Odc1	exon	ENSMUSG00000011179	ProperStrand	173	chr1	166368581	166368653	protein_coding	Atp1b1	exon	ENSMUSG00000026576	ProperStrand	67	1	-10.9667
chr5	45358218	45358258	protein_coding	4930431F12Rik	exon	ENSMUSG00000062496	NonProperStrand	3	chr16	23110849	23110889	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr9	67423867	67423957	LTR	ORR1E	MaLR	chr9ORR1E67423849	ProperStrand	1	chr9	67423682	67423762	SINE	B3	B2	chr9B367423622	NonProperStrand	1	1	-inf
chr19	23332023	23332040	protein_coding	Smc5	exon	ENSMUSG00000024943	ProperStrand	146	chr7	148634701	148634781	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-2.3904
chr19	16196966	16197046	LINE	Lx8	L1	chr19Lx816196965	NonProperStrand	1	chr19	16196789	16196879	SINE	ID4	ID	chr19ID416196811	ProperStrand	1	1	-inf
chr7	148596676	148596756	protein_coding	Pddc1	exon	ENSMUSG00000051007	NonProperStrand	1	chr7	148488375	148488465	protein_coding	Deaf1	intron	ENSMUSG00000058886	ProperStrand	23	1	-inf
chr19	21346787	21346867	protein_coding	Zfand5	utr5	ENSMUSG00000024750	ProperStrand	12	chr19	8963063	8963153	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	4	-16.9538
chr3	69293600	69293617	protein_coding	Ppm1l	intron	ENSMUSG00000027784	NonProperStrand	29	chr16	23110828	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-5.1035
chr13	51743580	51743661	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	chr4	116827119	116827159	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	2	-2.3355
chr11	104389966	104389994	protein_coding	Cdc27	exon	ENSMUSG00000020687	ProperStrand	24	chr18	35716699	35716759	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-6.4636
chr4	140387550	140387567	protein_coding	Padi1	intron	ENSMUSG00000025329	NonProperStrand	13	chr14	76247711	76247778	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-7.1966
chr7	117189861	117189944	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr14	33005037	33005160	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	7	-0.8029
chr9	78215694	78215828	protein_coding	Dppa5a	exon	ENSMUSG00000060461	ProperStrand	79	chr1	162967520	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	3	-7.6072
chr13	15698210	15698228	protein_coding	Gli3	intron	ENSMUSG00000021318	ProperStrand	54	chr1	174249044	174249094	protein_coding	Igsf8	exon	ENSMUSG00000038034	ProperStrand	25	1	-15.2831
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr14	31827490	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	2	-2.3004
chr15	102076417	102076540	protein_coding	Rarg	intron	ENSMUSG00000001288	ProperStrand	156	chr18	75161108	75161174	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	2	-11.4296
chr11	87794164	87794264	protein_coding	Dynll2	utr3	ENSMUSG00000020483	ProperStrand	22	chr7	117196320	117196348	protein_coding	Ipo7	exon	ENSMUSG00000066232	ProperStrand	2121	6	-19.6398
chr6	121621080	121623530	protein_coding	A2m	exon	ENSMUSG00000030111	ProperStrand	17	chr8	32260335	32260362	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	4	-19.3530
chr14	56281232	56281267	protein_coding	Nedd8	utr3	ENSMUSG00000010376	ProperStrand	27	chr17	24856620	24856720	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	2	-12.8400
chr2	90235293	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	26360446	26360536	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	2	-2.9628
chr7	112885778	112885796	protein_coding	Rrp8	exon	ENSMUSG00000030888	ProperStrand	8	chrX	93136011	93136027	protein_coding	Las1l	exon	ENSMUSG00000057421	ProperStrand	248	1	-14.5931
chr6	98972131	98972216	protein_coding	Foxp1	intron	ENSMUSG00000030067	ProperStrand	16	chr5	130300518	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.9748
chr7	109044954	109046253	protein_coding	3200002M19Rik	utr5	ENSMUSG00000030649	ProperStrand	22	chr2	22444415	22444456	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-9.8003
chr2	90235324	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	87498080	87498114	protein_coding	Prdx2	utr3	ENSMUSG00000005161	ProperStrand	20	1	-6.6233
chr17	56839771	56839861	protein_coding	Ranbp3	intron	ENSMUSG00000002372	ProperStrand	34	chr3	68889135	68889215	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-4.3182
chr16	31960222	31960254	protein_coding	Ncbp2	intron	ENSMUSG00000022774	NonProperStrand	28	chr16	23111758	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	5	-14.2271
chr15	31525430	31525580	protein_coding	Cct5	exon	ENSMUSG00000022234	ProperStrand	116	chr11	69483146	69483249	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	19	-inf
chr9	66305355	66306011	protein_coding	Herc1	exon	ENSMUSG00000038664	ProperStrand	81	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.7409
chr8	38049667	38049683	LTR	MLT1A0	MaLR	chr8MLT1A038049422	NonProperStrand	91	chr16	23110529	23110558	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.7820
chr1	11289060	11289077	protein_coding	Prex2	utr3	ENSMUSG00000048960	NonProperStrand	15	chr16	23111738	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-7.4115
chr1	62686775	62686791	protein_coding	Pard3b	utr3	ENSMUSG00000046526	ProperStrand	31	chr7	116664870	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.7407
chr14	32479927	32479943	protein_coding	Btd	exon	ENSMUSG00000021900	NonProperStrand	74	chr6	131317813	131317873	protein_coding	Csda	utr3	ENSMUSG00000030189	ProperStrand	86	1	-12.1686
chr7	4691730	4691747	protein_coding	Suv420h2	utr5	ENSMUSG00000059851	NonProperStrand	70	chr18	35716761	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	6	-12.1188
chr4	108392129	108392159	protein_coding	Zfyve9	exon	ENSMUSG00000034557	ProperStrand	14	chr9	15119645	15119767	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	4	-17.0209
chr8	83312814	83312858	protein_coding	Gab1	exon	ENSMUSG00000031714	ProperStrand	72	chr8	73419657	73419738	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.8058
chr3	85448965	85456213	protein_coding	Pet112l	exon	ENSMUSG00000028085	ProperStrand	81	chr14	31827478	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-6.3505
chr1	141319671	141319687	protein_coding	Zbtb41	utr5	ENSMUSG00000033964	NonProperStrand	145	chr19	8798483	8798553	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-3.5383
chr5	121655016	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	chr5	74489544	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	38	-2.8666
chrX	148708072	148708119	protein_coding	Kdm5c	utr3	ENSMUSG00000025332	ProperStrand	139	chr2	26494708	26494802	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.6984
chr2	90235293	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr15	79910908	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	22	-0.7348
chr10	19974352	19974384	protein_coding	Mtap7	intron	ENSMUSG00000019996	ProperStrand	43	chr16	23111373	23111446	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-3.2274
chr18	6471696	6471712	protein_coding	Epc1	intron	ENSMUSG00000024240	NonProperStrand	4	chr9	120039627	120039671	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-8.8220
mmu-miR-6240	4	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr8	39436369	39436386	protein_coding	Sgcz	intron	ENSMUSG00000039539	ProperStrand	46	1	-6.4284
chr12	32571091	32571140	protein_coding	Cog5	exon	ENSMUSG00000035933	ProperStrand	16	chr4	116827120	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	3	-20.0452
chr17	88099557	88099576	protein_coding	Msh2	intron	ENSMUSG00000024151	NonProperStrand	2	chr11	63885336	63887052	protein_coding	Cox10	exon	ENSMUSG00000042148	NonProperStrand	187	1	-18.9618
chr17	59135251	59135267	LTR	ORR1A2	MaLR	chr17ORR1A259135069	NonProperStrand	12	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-10.1895
chr4	43505702	43505792	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr15	82001549	82001591	protein_coding	Srebf2	exon	ENSMUSG00000022463	ProperStrand	592	9	-5.9865
chr11	68886929	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	chr13	90238582	90238722	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	9	-10.1662
chr18	54582045	54582061	lincRNA	9430076G02Rik	exon	ENSMUSG00000084814	ProperStrand	30	chr5	77427321	77427421	protein_coding	Srp72	utr3	ENSMUSG00000036323	ProperStrand	41	4	-inf
chr19	41348803	41348819	protein_coding	Pik3ap1	exon	ENSMUSG00000025017	NonProperStrand	26	chr8	74144661	74144741	protein_coding	Glt25d1	exon	ENSMUSG00000034807	ProperStrand	36	1	-16.0214
chr19	8799581	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	chr8	32260335	32260423	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	13	-9.6997
chr13	68723049	68723094	protein_coding	Fastkd3	utr5	ENSMUSG00000021532	ProperStrand	2	chr13	90238632	90238721	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	1	-16.1129
chr19	7351857	7352548	protein_coding	Mark2	exon	ENSMUSG00000024969	ProperStrand	75	chr16	23111771	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.5602
chr10	75322173	75322268	protein_coding	Mif	utr3	ENSMUSG00000033307	ProperStrand	146	chr16	23111450	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-1.3662
chr17	10402366	10402452	protein_coding	Qk	utr3	ENSMUSG00000062078	ProperStrand	63	chr7	29136572	29136598	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.2829
chr6	91428742	91428778	protein_coding	Tmem43	exon	ENSMUSG00000030095	ProperStrand	14	chr1	155287314	155287354	snoRNA	ENSMUSG00000064435_SNORA4	.	ENSMUSG00000064435	ProperStrand	263	2	-20.4735
chrX	139155556	139155588	protein_coding	Tmem164	intron	ENSMUSG00000047045	ProperStrand	13	chr17	24857765	24857845	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-5.1456
chr2	24917216	24917310	protein_coding	Nelf	utr3	ENSMUSG00000006476	ProperStrand	40	chr1	88247742	88247797	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-5.8908
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr11	62418014	62418044	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	2	-0.9454
chr17	29123995	29124015	protein_coding	Stk38	intron	ENSMUSG00000024006	NonProperStrand	2	chr16	23111734	23111779	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-8.9529
chr8	124960974	124960990	protein_coding	Mvd	exon	ENSMUSG00000006517	ProperStrand	13	chr4	155068933	155069001	protein_coding	B930041F14Rik	exon	ENSMUSG00000074738	ProperStrand	3	1	-inf
chr5	29045399	29045415	lincRNA	9530036O11Rik	exon	ENSMUSG00000086663	NonProperStrand	6	mmu-miR-6240	3	26	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	1	-10.6284
chr1	95310155	95310197	protein_coding	Hdlbp	exon	ENSMUSG00000034088	ProperStrand	97	chr7	29073210	29073330	protein_coding	BC089491	exon	ENSMUSG00000046750	ProperStrand	62	1	-12.2835
chr7	4098010	4098058	protein_coding	Leng8	utr3	ENSMUSG00000035545	ProperStrand	49	chr16	23111721	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.2326
mmu-miR-6240	1	23	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr15	76005537	76005553	protein_coding	Plec	exon	ENSMUSG00000022565	ProperStrand	186	1	-3.7349
chr5	130300315	130300358	protein_coding	Cct6a	exon	ENSMUSG00000029447	ProperStrand	128	chr8	32260335	32260398	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-3.2151
chr19	46967057	46967098	protein_coding	Nt5c2	exon	ENSMUSG00000025041	ProperStrand	15	chr4	131908356	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.7937
chr17	36097663	36097764	protein_coding	Abcf1	exon	ENSMUSG00000038762	ProperStrand	206	chr2	130101259	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-4.1984
chr11	68886971	68887033	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	chr17	35384176	35384193	snoRNA	ENSMUSG00000065273_SNORD83	.	ENSMUSG00000065273	ProperStrand	244	3	-4.8189
chr10	121052207	121053698	protein_coding	Xpot	exon	ENSMUSG00000034667	ProperStrand	35	chr17	35089182	35089210	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	7	-18.9689
chr16	13657036	13657053	protein_coding	Parn	exon	ENSMUSG00000022685	ProperStrand	30	chr2	121885929	121885957	protein_coding	Spg11	exon	ENSMUSG00000033396	ProperStrand	32	1	-15.9780
chr11	3701052	3701073	protein_coding	Osbp2	intron	ENSMUSG00000020435	ProperStrand	60	chr5	123622050	123622066	protein_coding	Hpd	exon	ENSMUSG00000029445	ProperStrand	254	1	-10.4203
chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	2	-4.8714
chr8	105560721	105560738	LINE	L1VL4	L1	chr8L1VL4105560332	NonProperStrand	17	chr3	123210906	123210985	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-4.3464
chr5	93372122	93377456	protein_coding	Shroom3	exon	ENSMUSG00000029381	ProperStrand	52	chr10	23505190	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.4343
chr14	78911119	78911193	protein_coding	Akap11	exon	ENSMUSG00000022016	ProperStrand	44	chr7	150717325	150717415	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	2	-9.9451
chr13	48975181	48999308	protein_coding	Fam120a	intron	ENSMUSG00000038014	ProperStrand	76	chr9	15119631	15119714	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	4	-8.2736
chrX	7780375	7780504	protein_coding	Porcn	exon	ENSMUSG00000031169	ProperStrand	2	chr8	41570003	41570019	protein_coding	Zdhhc2	utr3	ENSMUSG00000039470	NonProperStrand	85	1	-inf
chr4	101331015	101331031	protein_coding	Leprot	utr3	ENSMUSG00000035212	ProperStrand	22	chr4	131908244	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.0772
chr17	66438623	66438646	protein_coding	Ndufv2	exon	ENSMUSG00000024099	ProperStrand	17	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	1	-9.5731
chr9	96976664	96976702	protein_coding	Slc25a36	utr3	ENSMUSG00000032449	ProperStrand	159	chr10	80674669	80675224	protein_coding	Atcay	exon	ENSMUSG00000034958	ProperStrand	94	1	-10.4554
chr7	63468255	63468355	protein_coding	Herc2	exon	ENSMUSG00000030451	ProperStrand	66	chr10	23505152	23505206	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.1060
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr6	124810680	124810696	protein_coding	Gpr162	exon	ENSMUSG00000038390	NonProperStrand	40	1	-8.6081
chr17	43592992	43593009	protein_coding	Gpr116	utr3	ENSMUSG00000056492	ProperStrand	14	chr18	33954827	33954939	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-6.3373
chr18	64668924	64668963	protein_coding	Nars	exon	ENSMUSG00000024587	ProperStrand	97	chr8	72143258	72143339	protein_coding	Zfp868	utr5	ENSMUSG00000060427	ProperStrand	6	4	-19.8247
chr3	8935007	8944629	protein_coding	Tpd52	exon	ENSMUSG00000027506	ProperStrand	37	chrX	84483704	84483734	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-9.2205
chr2	71734023	71734113	protein_coding	Pdk1	intron	ENSMUSG00000006494	ProperStrand	37	chr16	23110491	23110571	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.3186
chr4	53015201	53015217	SINE	B1F1	Alu	chr4B1F153015138	ProperStrand	102	chr10	90432659	90432679	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	1	-9.5539
chr14	65376385	65377441	protein_coding	Kif13b	exon	ENSMUSG00000060012	ProperStrand	37	chrX	34622940	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-4.0674
chr15	36525810	36525829	protein_coding	Pabpc1	utr3	ENSMUSG00000022283	ProperStrand	908	chr2	32818887	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-0.8595
chr1	162965530	162965601	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr11	83107806	83107903	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	3	-1.1339
chr3	85941944	85942006	protein_coding	Rps3a	exon	ENSMUSG00000028081	ProperStrand	177	chr7	51503506	51503547	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	4	-19.3207
chr4	116944897	116944971	protein_coding	Rnf220	utr3	ENSMUSG00000028677	ProperStrand	131	chr7	117189957	117190047	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-1.9863
chr3	127510552	127510569	protein_coding	Tifa	intron	ENSMUSG00000046688	ProperStrand	15	chr4	131865855	131865964	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.2332
chrX	7444945	7445023	protein_coding-noncoding	Otud5	utr5	ENSMUSG00000031154	ProperStrand	2	chrX	7444893	7444941	protein_coding	Otud5	exon	ENSMUSG00000031154	ProperStrand	79	2	-inf
chr15	97825302	97825345	protein_coding	Col2a1	exon	ENSMUSG00000022483	ProperStrand	34	chr11	97642952	97642988	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-5.9566
chr9	120864339	120864366	protein_coding	Ctnnb1	exon	ENSMUSG00000006932	ProperStrand	214	chr4	141547171	141547187	protein_coding	Fhad1	exon	ENSMUSG00000051435	NonProperStrand	8	1	-14.9027
chr17	27076002	27076401	protein_coding	Cuta	exon	ENSMUSG00000024194	ProperStrand	1	chr16	23111777	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-inf
chr9	15118284	15118378	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	chr15	79908926	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	15	-1.0511
chr6	115758013	115758113	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr5	147646411	147646463	snoRNA	ENSMUSG00000077185_SNORD102	.	ENSMUSG00000077185	ProperStrand	142	1	-3.8250
chr17	34089207	34092024	protein_coding	Rps18	exon	ENSMUSG00000008668	ProperStrand	111	chr4	131908236	131908432	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-1.3760
chr8	18802280	18802297	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr16	23111373	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	13	-3.8381
chr1	95647214	95647239	protein_coding	Thap4	exon	ENSMUSG00000026279	ProperStrand	10	chr1	162967508	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-11.4041
chr18	10115156	10115194	protein_coding	Rock1	intron	ENSMUSG00000024290	ProperStrand	21	chr2	130855710	130855740	protein_coding	Atrn	utr3	ENSMUSG00000027312	ProperStrand	16	3	-inf
chr15	96522836	96523010	protein_coding	Slc38a2	exon	ENSMUSG00000022462	ProperStrand	133	chr4	151348417	151351069	protein_coding	Dnajc11	exon	ENSMUSG00000039768	NonProperStrand	16	1	-14.4032
chr13	23830782	23830872	protein_coding	Hist1h1c	exon	ENSMUSG00000036181	ProperStrand	99	chr9	64022854	64022923	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	2	-11.3008
chr19	38763999	38764020	protein_coding	Plce1	intron	ENSMUSG00000024998	NonProperStrand	11	chr10	110918577	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	3	-15.7424
chr15	96529120	96529210	protein_coding	Slc38a2	utr5	ENSMUSG00000022462	ProperStrand	133	chr6	149277742	149277822	protein_coding	2810474O19Rik	exon	ENSMUSG00000032712	ProperStrand	70	1	-11.4053
chr5	111812088	111812105	protein_coding	Pitpnb	exon	ENSMUSG00000050017	ProperStrand	137	chr1	63225577	63225625	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-5.0512
chr17	15656883	15657005	protein_coding	Tbp	utr3	ENSMUSG00000014767	ProperStrand	8	chr18	73693166	73693182	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-9.6171
chr4	13675077	13675096	protein_coding	Runx1t1	intron	ENSMUSG00000006586	ProperStrand	7	chr9	15119646	15119712	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-6.8089
chr10	80645151	80645192	protein_coding	Eef2	utr3	ENSMUSG00000034994	NonProperStrand	20	chr11	97642952	97643037	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	NonProperStrand	10	1	-18.7257
chr19	11864078	11864117	protein_coding	Stx3	exon	ENSMUSG00000041488	ProperStrand	37	chr7	116664843	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-8.5749
chr7	112533563	112533579	protein_coding	Fam160a2	exon	ENSMUSG00000044465	ProperStrand	85	chr5	74489543	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-3.1395
chr8	86464505	86464522	protein_coding	Gm10644	intron	ENSMUSG00000074219	ProperStrand	18	chr2	63936035	63936053	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-10.2961
chr15	98675524	98680654	protein_coding	Mll2	exon	ENSMUSG00000048154	ProperStrand	170	chr3	123210854	123210983	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	6	-6.2011
chr1	182666937	182666954	protein_coding	Acbd3	exon	ENSMUSG00000026499	ProperStrand	67	chr19	8963081	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.0927
chr10	128157455	128157533	protein_coding	Dgka	utr3	ENSMUSG00000025357	ProperStrand	10	chr16	23110914	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-7.6230
chr17	32453268	32453285	protein_coding	Akap8	exon	ENSMUSG00000024045	ProperStrand	339	chr10	45396255	45396316	protein_coding	Hace1	exon	ENSMUSG00000038822	ProperStrand	8	1	-13.9813
chr17	35278411	35278455	protein_coding	Bag6	exon	ENSMUSG00000024392	ProperStrand	181	chr7	52381973	52382011	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-4.5597
chr13	30632791	30632892	protein_coding	Uqcrfs1	exon	ENSMUSG00000038462	ProperStrand	24	chr17	13112532	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	9	-19.3868
chr6	95538943	95539015	protein_coding	Suclg2	exon	ENSMUSG00000061838	ProperStrand	35	chr11	69483195	69483286	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.4080
chr19	5105061	5105145	protein_coding	Rab1b	intron	ENSMUSG00000024870	ProperStrand	133	chr2	153050783	153050799	protein_coding	Tspyl3	exon	ENSMUSG00000074671	ProperStrand	228	1	-9.0407
chr14	57248933	57248949	protein_coding	Parp4	intron	ENSMUSG00000054509	ProperStrand	44	chr11	69483136	69483233	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.9921
chr10	127180089	127180179	protein_coding	Zbtb39	exon	ENSMUSG00000044617	ProperStrand	9	chr4	131865411	131865491	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-7.7817
chr2	69792343	69792398	protein_coding	Ubr3	exon	ENSMUSG00000044308	ProperStrand	62	chr8	73419697	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	8	-inf
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr5	4083251	4086497	protein_coding	Cyp51	exon	ENSMUSG00000001467	ProperStrand	13	4	-19.5362
chr13	98263539	98263569	lincRNA	Gm11019	intron	ENSMUSG00000078952	ProperStrand	113	chr7	117189957	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	4	-8.2387
chr1	10027054	10027154	protein_coding	Cops5	intron	ENSMUSG00000025917	ProperStrand	11	chr10	23505152	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.1476
chr19	5286582	5286599	protein_coding	Sf3b2	exon	ENSMUSG00000024853	ProperStrand	102	chr15	8952097	8956101	protein_coding	Ranbp3l	exon	ENSMUSG00000048424	ProperStrand	45	1	-12.8273
chr11	86069610	86069631	protein_coding	Ints2	exon	ENSMUSG00000018068	ProperStrand	17	chr10	110918574	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-5.8838
chr18	32181080	32181096	protein_coding	Myo7b	intron	ENSMUSG00000024388	ProperStrand	8	chr15	34370601	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-7.5453
chr9	19462393	19462473	LINE	L1Md_A	L1	chr9L1Md_A19461964	ProperStrand	81	chr7	91716818	91716907	lincRNA	Gm2115	intron	ENSMUSG00000085128	NonProperStrand	1	1	-inf
chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	chr5	108334195	108334248	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-1.7328
chr9	25059948	25059964	protein_coding	Sept7	intron	ENSMUSG00000001833	ProperStrand	101	chr4	116828389	116828452	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-7.3438
chr7	52975331	52975386	protein_coding	Rpl18	exon	ENSMUSG00000059070	ProperStrand	116	chr7	117189994	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.1836
chr1	58480808	58480824	protein_coding	Clk1	utr5	ENSMUSG00000026034	NonProperStrand	3	chr7	52382234	52382275	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-14.6476
chr15	88518737	88518799	protein_coding	Brd1	exon	ENSMUSG00000022387	ProperStrand	70	chr11	97643000	97643090	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.2124
chr9	53389479	53389495	protein_coding	Acat1	utr3	ENSMUSG00000032047	ProperStrand	13	chr11	6519810	6519928	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-11.0507
chr2	90235285	90235345	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	10	-6.3523
chr4	151351163	151352114	protein_coding	Dnajc11	exon	ENSMUSG00000039768	ProperStrand	15	chr2	166890531	166890581	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	2	-16.3916
chr12	106002200	106002217	protein_coding	Clmn	utr3	ENSMUSG00000021097	ProperStrand	50	chr9	20444028	20444053	protein_coding	Fbxl12	intron	ENSMUSG00000066892	ProperStrand	6	1	-18.2322
chr6	113274540	113274623	protein_coding	Brpf1	utr3	ENSMUSG00000001632	ProperStrand	23	chr1	88247742	88247763	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-6.9949
chrX	72354721	72354789	protein_coding	Dkc1	utr3	ENSMUSG00000031403	ProperStrand	89	chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	1	-8.3984
chr15	76736620	76736720	protein_coding	Rpl8	utr3	ENSMUSG00000003970	ProperStrand	191	chr1	162966813	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-4.0231
chr2	90235315	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	26472435	26472451	protein_coding	Tgfb1	utr5	ENSMUSG00000002603	NonProperStrand	154	1	-2.7317
chr4	141695416	141695439	protein_coding	Kazn	utr3	ENSMUSG00000040606	ProperStrand	123	chr11	106362341	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-4.4527
chr5	140234163	140234402	protein_coding	Ints1	exon	ENSMUSG00000029547	ProperStrand	45	chr15	79913288	79913333	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.1312
chr18	50306098	50306119	protein_coding	Hsd17b4	exon	ENSMUSG00000024507	ProperStrand	19	chr15	34370545	34370627	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-5.7679
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr1	180372181	180372197	protein_coding	Efcab2	intron	ENSMUSG00000026495	NonProperStrand	2	1	-15.2570
chrX	132190782	132190800	protein_coding	1700008I05Rik	intron	ENSMUSG00000058252	ProperStrand	4	chr12	60128919	60129014	protein_coding	Sip1	utr3	ENSMUSG00000060121	NonProperStrand	2	2	-inf
chr11	94505952	94505999	protein_coding	Lrrc59	utr3	ENSMUSG00000020869	ProperStrand	115	chr14	77424372	77424388	protein_coding	9030625A04Rik	utr3	ENSMUSG00000044350	NonProperStrand	152	1	-10.1415
chr5	107860937	107860954	protein_coding	Lpcat2b	utr5	ENSMUSG00000033794	ProperStrand	15	chr12	106269476	106269558	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-6.8702
chr16	23111705	23111754	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	chr5	23358047	23358098	snoRNA	ENSMUSG00000093321_Snord93	.	ENSMUSG00000093321	ProperStrand	218	3	-1.4379
chr4	63211296	63211314	protein_coding	Atp6v1g1	utr3	ENSMUSG00000039105	NonProperStrand	24	chr12	88778628	88778688	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-8.3336
chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	chr5	108336363	108336429	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-1.0257
chr15	100223676	100223697	protein_coding	Slc11a2	utr3	ENSMUSG00000023030	ProperStrand	12	chr2	26494762	26494825	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-6.2196
chr7	3610349	3610412	protein_coding-noncoding	Cnot3	utr5	ENSMUSG00000035632	ProperStrand	1	chr16	23110526	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-inf
chr4	107886484	107886508	protein_coding	Zyg11a	intron	ENSMUSG00000034645	ProperStrand	19	chr5	130300468	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-7.7517
chr19	8800355	8800404	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	NonProperStrand	18	chr17	35089182	35089221	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	NonProperStrand	5	1	-19.7442
chr1	74850266	74850312	protein_coding	Wnt10a	utr3	ENSMUSG00000026167	NonProperStrand	2	chr4	131908320	131908355	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-8.3123
chr7	134655691	134655754	protein_coding	Srcap	utr5	ENSMUSG00000053877	ProperStrand	69	chr6	71832602	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-5.3381
chr1	167522915	167523015	protein_coding	Mpzl1	utr3	ENSMUSG00000026566	ProperStrand	27	chr1	162965563	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.7840
chr9	7973830	8001460	protein_coding	Yap1	exon	ENSMUSG00000053110	ProperStrand	68	chr17	24857796	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-3.7635
chr6	108304623	108306197	protein_coding	Itpr1	exon	ENSMUSG00000030102	ProperStrand	94	chr16	23111372	23111448	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.7075
chr7	117189878	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	chr2	166890780	166890858	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	2	-1.9836
chr8	73153770	73153860	protein_coding	Gdf15	exon	ENSMUSG00000038508	ProperStrand	8	chr15	34370632	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-7.5453
chr1	190267301	190267317	protein_coding	Ush2a	exon	ENSMUSG00000026609	NonProperStrand	60	chr16	33625246	33646649	protein_coding	Slc12a8	exon	ENSMUSG00000035506	ProperStrand	52	1	-13.6011
chr16	11254028	11254105	protein_coding	Gspt1	utr5	ENSMUSG00000062203	ProperStrand	49	chr3	108357328	108357418	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-4.9302
chr6	87769189	87769558	protein_coding	Isy1	exon	ENSMUSG00000030056	ProperStrand	172	chr1	102076758	102076790	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	1	-7.3340
chr7	52958453	52958469	protein_coding	Car11	exon	ENSMUSG00000003273	NonProperStrand	250	chr9	59518325	59518376	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	2	-7.3104
chr15	34204030	34204161	protein_coding	Laptm4b	intron	ENSMUSG00000022257	ProperStrand	24	chr12	112779257	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-6.5799
chr10	128061669	128062325	protein_coding	Rps26	exon	ENSMUSG00000025362	ProperStrand	67	chr16	16926067	16926109	protein_coding	Ppm1f	utr3	ENSMUSG00000026181	ProperStrand	37	4	-18.8032
chr11	79870025	79871322	protein_coding	Crlf3	exon	ENSMUSG00000017561	ProperStrand	47	chr4	131865889	131865969	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.1591
chr11	54683855	54683903	protein_coding	Hint1	utr3	ENSMUSG00000020267	ProperStrand	11	chr11	69483136	69483193	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-9.3712
chr11	5891157	5891174	protein_coding	Camk2b	intron	ENSMUSG00000057897	ProperStrand	14	chr11	69483136	69483193	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-5.1730
chr6	84808451	84808487	protein_coding	Exoc6b	exon	ENSMUSG00000033769	ProperStrand	23	chr8	73419657	73419712	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.9417
chr13	99086858	99086931	protein_coding	Btf3	utr5	ENSMUSG00000021660	ProperStrand	64	chr2	156339850	156339880	protein_coding	Epb4.1l1	exon	ENSMUSG00000027624	ProperStrand	27	2	-19.4071
chr18	36961592	36961663	misc_RNA	Vault	.	ENSMUSG00000065145	ProperStrand	177	chr11	69483136	69483184	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-0.8590
chr2	87802622	87802639	protein_coding	Olfr1157	exon	ENSMUSG00000075143	NonProperStrand	49	chr11	106362568	106362638	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-7.8090
chr17	21095696	21095911	protein_coding	Ppp2r1a	exon	ENSMUSG00000007564	ProperStrand	57	chr16	23111803	23111837	protein_coding	Eif4a2	intron	ENSMUSG00000022884	ProperStrand	356	4	-19.2537
chr6	92192726	92192816	protein_coding	Trh	exon	ENSMUSG00000005892	ProperStrand	87	chr7	117189939	117190019	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-4.6706
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr3	66100724	66100740	protein_coding	Veph1	utr5	ENSMUSG00000027831	NonProperStrand	92	1	-5.0698
chr17	13184995	13185014	protein_coding	Wtap	utr5	ENSMUSG00000060475	ProperStrand	119	chr11	69481361	69481431	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-2.0235
chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	chr10	23505593	23505625	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-4.3925
chr4	108278918	108278934	protein_coding	Orc1	exon	ENSMUSG00000028587	ProperStrand	161	chr8	98394724	98394798	protein_coding	Got2	exon	ENSMUSG00000031672	ProperStrand	85	1	-10.6325
chr4	137439164	137439248	antisense	Gm13012	.	ENSMUSG00000085823	ProperStrand	1	chr17	34808360	34808376	protein_coding	Tnxb	exon	ENSMUSG00000033327	ProperStrand	36	1	-inf
chr16	17853966	17853999	protein_coding	Gm20518	intron	ENSMUSG00000092470	ProperStrand	14	chr4	122970466	122970524	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-10.3646
chr11	29593218	29593234	protein_coding	Rtn4	exon	ENSMUSG00000020458	NonProperStrand	5	chr18	61715402	61715425	protein_coding	Csnk1a1	utr5	ENSMUSG00000024576	ProperStrand	64	1	-18.0009
chr4	43505657	43505681	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr4	86500648	86500747	protein_coding	Rps6	exon	ENSMUSG00000028495	ProperStrand	263	1	-0.8135
chr10	77454763	77454826	protein_coding	Pfkl	exon	ENSMUSG00000020277	ProperStrand	179	chr4	81088610	81088626	protein_coding	Mpdz	utr5	ENSMUSG00000028402	ProperStrand	21	1	-13.2472
chr2	84978726	84978742	protein_coding	Aplnr	utr3	ENSMUSG00000044338	ProperStrand	13	chr5	144015063	144015081	protein_coding	Zfp316	exon	ENSMUSG00000046658	NonProperStrand	4	1	-20.8300
chr11	83085101	83085192	snRNA	ENSMUSG00000064856_U2	.	ENSMUSG00000064856	ProperStrand	34	chr19	8799829	8799863	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-6.0600
chr11	4820972	4820990	protein_coding	Thoc5	intron	ENSMUSG00000034274	ProperStrand	325	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-2.6992
chr2	179960346	179960446	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr7	123476684	123476746	snoRNA	ENSMUSG00000064741_Snord14a	.	ENSMUSG00000064741	ProperStrand	83	1	-9.0455
chr8	81255973	81256006	protein_coding	Slc10a7	utr3	ENSMUSG00000031684	ProperStrand	55	chr10	110918538	110918630	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	3	-8.9494
chr10	127556704	127556770	protein_coding	Baz2a	exon	ENSMUSG00000040054	ProperStrand	274	chr7	116664809	116664873	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-1.8190
chr13	55448275	55448321	protein_coding	Lman2	exon	ENSMUSG00000021484	ProperStrand	26	chr11	69483187	69483277	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.9646
chr5	24076990	24077846	protein_coding	Abcf2	exon	ENSMUSG00000028953	ProperStrand	50	chr1	162965536	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	5	-15.2859
chr9	96992958	96993048	protein_coding	Slc25a36	utr3	ENSMUSG00000032449	NonProperStrand	4	chr17	95160908	95218243	protein_coding	2610044O15Rik	exon	ENSMUSG00000066057	ProperStrand	1	1	-inf
chr8	86098411	86118242	protein_coding	Tecr	exon	ENSMUSG00000031708	ProperStrand	100	chr7	26031201	26031247	protein_coding	Erf	exon	ENSMUSG00000040857	ProperStrand	20	1	-14.5159
chr4	83938091	83938107	protein_coding	Bnc2	exon	ENSMUSG00000028487	ProperStrand	76	chr5	115939529	115939557	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-7.3940
chr4	11849262	11849281	LINE	Lx8	L1	chr4Lx811849111	NonProperStrand	12	chr11	6428060	6428154	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-6.3129
chr8	39436369	39436386	protein_coding	Sgcz	intron	ENSMUSG00000039539	ProperStrand	46	chr9	56934392	56934457	protein_coding	Sin3a	utr5	ENSMUSG00000042557	ProperStrand	108	1	-12.6689
chr1	33828651	33828669	protein_coding	Zfp451	intron	ENSMUSG00000042197	NonProperStrand	393	chr4	121870881	122132509	pseudogene	Gm12896	.	ENSMUSG00000083558	NonProperStrand	19	1	-11.8799
chr13	6588697	6588777	protein_coding	Pfkp	intron	ENSMUSG00000021196	ProperStrand	197	chr16	23110509	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-0.7460
chr7	54105552	54105644	protein_coding	Ldha	exon	ENSMUSG00000063229	ProperStrand	280	chr2	32818881	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-2.6045
chr12	72941181	72941201	protein_coding	Daam1	intron	ENSMUSG00000034574	NonProperStrand	15	chr11	69481334	69481411	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-9.6421
chr12	111903326	111903352	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr10	80669283	80669300	protein_coding	Atcay	utr3	ENSMUSG00000034958	ProperStrand	94	1	-7.6562
mmu-miR-6240	1	23	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr5	144085983	144086573	protein_coding	Zdhhc4	exon	ENSMUSG00000001844	NonProperStrand	14	1	-8.8326
chr5	141000555	141000571	protein_coding	Chst12	exon	ENSMUSG00000036599	NonProperStrand	42	chr12	60141353	60141406	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-7.5404
chr13	55463814	55463832	protein_coding	Lman2	exon	ENSMUSG00000021484	ProperStrand	26	chr9	60719914	60719930	protein_coding	Uaca	exon	ENSMUSG00000034485	ProperStrand	109	1	-13.8042
chr2	90235297	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	26350345	26350361	protein_coding	Itfg3	utr3	ENSMUSG00000024187	NonProperStrand	4	1	-10.0500
chr10	126504779	126504869	protein_coding	Tspan31	utr3	ENSMUSG00000006736	ProperStrand	9	chr5	74489596	74489676	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-7.5428
chr7	52108148	52108238	protein_coding	Akt1s1	exon	ENSMUSG00000011096	ProperStrand	10	chr5	125513870	125513950	protein_coding	Ncor2	exon	ENSMUSG00000029478	ProperStrand	377	1	-13.2986
chr4	126898271	126898316	protein_coding	Dlgap3	intron	ENSMUSG00000042388	ProperStrand	12	chr12	17552956	17553033	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-8.3166
chr4	139482849	139482865	lincRNA	4933427I22Rik	exon	ENSMUSG00000085928	ProperStrand	62	chr11	6428108	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.1331
chr11	78086787	78086944	protein_coding	2610507B11Rik	exon	ENSMUSG00000010277	ProperStrand	246	chr17	14039580	14039608	protein_coding	Mllt4	exon	ENSMUSG00000068036	ProperStrand	156	1	-8.5710
chr2	164251555	164251583	protein_coding	Sdc4	utr3	ENSMUSG00000017009	ProperStrand	177	chr7	117189990	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-1.5241
mmu-miR-1949	3	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr1	89681202	89681284	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	3	-3.1902
chr9	66255883	66255899	protein_coding	Herc1	exon	ENSMUSG00000038664	NonProperStrand	35	chr2	180329019	180329062	protein_coding	Ogfr	exon	ENSMUSG00000049401	ProperStrand	8	1	-17.9876
chr12	113032821	113032839	protein_coding	Klc1	utr3	ENSMUSG00000021288	NonProperStrand	5	chr3	123210854	123210920	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-6.8746
chr11	3875535	3875634	protein_coding	Pes1	exon	ENSMUSG00000020430	ProperStrand	49	chr3	152450607	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	1	-9.2112
chr17	17178386	17178466	LINE	Lx6	L1	chr17Lx617178374	ProperStrand	5	chr10	23505176	23505266	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-inf
chr1	180258975	180259075	protein_coding	Hnrnpu	utr3	ENSMUSG00000039630	ProperStrand	286	chr2	158185530	158185564	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-3.4898
chr2	5766323	5766423	protein_coding	Nudt5	utr5	ENSMUSG00000025817	ProperStrand	5	chr14	33005094	33005138	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-9.0442
chr19	6058497	6059399	protein_coding	Fau	exon	ENSMUSG00000038274	ProperStrand	64	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	8	-6.7414
chr7	24713726	24713742	protein_coding	Vmn1r179	exon	ENSMUSG00000046924	NonProperStrand	69	chr18	73693169	73693187	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-5.2515
chr16	18951289	18951379	protein_coding	Hira	exon	ENSMUSG00000022702	ProperStrand	28	chr15	34370544	34370624	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-5.0008
chr1	53378205	53378341	protein_coding-noncoding	Osgepl1	utr5	ENSMUSG00000026096	ProperStrand	1	chr5	8412134	8412184	protein_coding	Dbf4	exon	ENSMUSG00000002297	ProperStrand	38	1	-inf
chr2	52991803	52991859	protein_coding	Fmnl2	utr3	ENSMUSG00000036053	ProperStrand	35	chr17	35299551	35299641	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-5.8297
chr1	42755254	42755270	protein_coding	Pou3f3	exon	ENSMUSG00000045515	NonProperStrand	117	chr19	8963027	8963180	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-2.4018
chr11	121158250	121158277	protein_coding	Foxk2	exon	ENSMUSG00000039275	ProperStrand	38	chr7	118219574	118219627	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-5.0484
chr15	84143641	84143702	protein_coding	Parvb	utr3	ENSMUSG00000022438	ProperStrand	127	chr9	120038521	120038611	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-3.2582
chr7	13636914	13636931	protein_coding	Mzf1	exon	ENSMUSG00000030380	NonProperStrand	14	chr11	6428107	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.9988
chr8	24042846	24042864	protein_coding	Myst3	exon	ENSMUSG00000031540	ProperStrand	111	chr9	114437268	114437326	protein_coding	Trim71	intron	ENSMUSG00000079259	ProperStrand	162	1	-10.0850
chrX	98901061	98901096	SINE	B1_Mur3	Alu	chrXB1_Mur398901009	NonProperStrand	1	chr5	138182192	138182208	protein_coding	6430598A04Rik	intron	ENSMUSG00000045348	ProperStrand	7	1	-inf
chr12	4103090	4103121	protein_coding	Dnajc27	exon	ENSMUSG00000020657	ProperStrand	6	chr6	115757991	115758091	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-10.1855
chr9	78023109	78023162	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	3	-2.4556
chr10	80642899	80642947	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr5	27676304	27676321	protein_coding	Dpp6	intron	ENSMUSG00000061576	ProperStrand	35	1	-7.1700
chr6	50383117	50383135	protein_coding	Osbpl3	intron	ENSMUSG00000029822	ProperStrand	34	chr2	32818832	32818883	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-6.5923
chr5	125365410	125365510	protein_coding	Zfp664	utr5	ENSMUSG00000079215	ProperStrand	47	chr19	8800441	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-3.9853
chr1	120014613	120014665	LINE	L1Md_F	L1	chr1L1Md_F120014413	NonProperStrand	1	chr16	23110472	23110562	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-inf
chr11	70518545	70518737	protein_coding	Kif1c	exon	ENSMUSG00000020821	ProperStrand	26	chr8	113447146	113447171	protein_coding	St3gal2	intron	ENSMUSG00000031749	ProperStrand	206	1	-12.5323
chr4	131908232	131908260	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chrX	148363957	148364635	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	1	-3.1848
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr1	180558406	180558423	protein_coding	Kif26b	intron	ENSMUSG00000026494	NonProperStrand	14	1	-11.5644
chr2	90235315	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chrX	7484585	7484601	protein_coding	Timm17b	utr3	ENSMUSG00000031158	ProperStrand	36	1	-5.4531
chr3	90197173	90197671	protein_coding	Ints3	exon	ENSMUSG00000027933	ProperStrand	87	chr1	102076758	102076791	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	1	-8.6908
chr9	36549169	36549310	protein_coding	Stt3a	exon	ENSMUSG00000032116	ProperStrand	31	chr9	28982468	28982486	protein_coding	Ntm	intron	ENSMUSG00000059974	ProperStrand	49	1	-15.0605
chr9	114422488	114422527	protein_coding	Trim71	exon	ENSMUSG00000079259	ProperStrand	162	chr17	35088957	35089017	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-3.9577
chr14	65372808	65372897	snoRNA	ENSMUSG00000064442_SNORA36	.	ENSMUSG00000064442	ProperStrand	296	chr5	130295473	130295553	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-2.3161
chr9	62225362	62225386	protein_coding	Anp32a	exon	ENSMUSG00000032249	ProperStrand	75	chr4	131866172	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	4	-11.0419
chr5	34973739	34973829	protein_coding	Add1	utr3	ENSMUSG00000029106	ProperStrand	88	chr15	98350151	98350231	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-4.0315
chr13	51743567	51743660	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	chr11	106362672	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	4	-6.0486
chr11	56149587	56149667	LINE	Lx4A	L1	chr11Lx4A56149554	ProperStrand	1	chr11	56149910	56150000	LTR	RMER17B	ERVK	chr11RMER17B56149891	NonProperStrand	1	1	-inf
chr1	9536022	9536122	protein_coding	Rrs1	exon	ENSMUSG00000061024	ProperStrand	18	chr7	116664811	116664870	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-7.9847
chr9	75579851	75579868	LTR	MMETn-int	ERVK	chr9MMETn-int75578477	ProperStrand	3	chr11	69483262	69483316	protein_coding-noncoding	Eif4a1	utr3	ENSMUSG00000059796	ProperStrand	68	1	-19.2957
chr3	57281476	57305689	protein_coding	Wwtr1	exon	ENSMUSG00000027803	ProperStrand	7	chr4	131908236	131908344	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-13.1071
chr4	134893762	134900529	protein_coding	Srrm1	exon	ENSMUSG00000028809	ProperStrand	142	chr4	131866155	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-3.8482
chr16	90938176	90938192	protein_coding	Synj1	utr3	ENSMUSG00000022973	NonProperStrand	6	chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	1	-17.2064
chr12	3968611	3968627	protein_coding	Efr3b	exon	ENSMUSG00000020658	ProperStrand	142	chr5	143666338	143666356	protein_coding	Actb	exon	ENSMUSG00000029580	ProperStrand	446	1	-7.5763
chr8	108143774	108144092	protein_coding	Fam65a	exon	ENSMUSG00000038604	ProperStrand	19	chr1	72272889	72272913	snRNA	ENSMUSG00000075752_U2	.	ENSMUSG00000075752	ProperStrand	535	1	-11.2640
chr8	34897231	34897331	protein_coding	Rbpms	intron	ENSMUSG00000031586	ProperStrand	58	chr11	55296279	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-6.2469
chr6	119304833	119304861	protein_coding	Adipor2	utr3	ENSMUSG00000030168	ProperStrand	79	chr4	131866240	131866285	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-3.1618
chr8	13416894	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr4	131865854	131865988	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	32	-3.4641
chr3	133131100	133132265	protein_coding	Tet2	exon	ENSMUSG00000040943	ProperStrand	192	chr11	6520347	6520437	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	1	-5.4237
chr2	5973241	5973360	protein_coding	Upf2	intron	ENSMUSG00000043241	ProperStrand	21	chr15	34370545	34370579	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	6	-inf
chr2	90235292	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr14	71167341	71167359	protein_coding	Dok2	intron	ENSMUSG00000022102	ProperStrand	4	1	-10.0500
chrX	34589398	34589415	protein_coding	Sowahd	exon	ENSMUSG00000044400	ProperStrand	26	chr1	162968441	162968470	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-7.7477
chr1	14745997	14746061	protein_coding	Gm9947	utr3	ENSMUSG00000054493	NonProperStrand	1	chr19	8963116	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-inf
chr16	89994376	89994393	protein_coding	Tiam1	intron	ENSMUSG00000002489	ProperStrand	80	chr7	29136555	29136631	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.8942
chr2	90235299	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	147646458	147646477	snoRNA	ENSMUSG00000077185_SNORD102	.	ENSMUSG00000077185	ProperStrand	142	1	-2.8737
chr3	141975423	141975451	protein_coding	Pdlim5	exon	ENSMUSG00000028273	ProperStrand	17	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	5	-19.0584
chr8	131240175	131241133	protein_coding	Itgb1	exon	ENSMUSG00000025809	ProperStrand	35	chr11	4820972	4820990	protein_coding	Thoc5	intron	ENSMUSG00000034274	ProperStrand	325	1	-11.0155
chr2	79843543	79843559	protein_coding	Pde1a	intron	ENSMUSG00000059173	NonProperStrand	275	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-0.8404
chr15	72824949	72825020	protein_coding	Trappc9	intron	ENSMUSG00000047921	NonProperStrand	53	chr11	108204937	108204953	protein_coding	Prkca	exon	ENSMUSG00000050965	ProperStrand	48	1	-14.0101
chr12	112689323	112689340	protein_coding	Tnfaip2	exon	ENSMUSG00000021281	NonProperStrand	2	chr18	73693171	73693187	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-12.9450
chr7	13516144	13516193	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr15	79908929	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-1.3704
chr15	31523992	31524179	protein_coding	Cct5	exon	ENSMUSG00000022234	ProperStrand	116	chr1	89673712	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-2.1212
chr2	28716326	28716408	protein_coding	Ddx31	exon	ENSMUSG00000026806	ProperStrand	8	chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	1	-14.2104
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr12	119199538	119199555	protein_coding	Dnahc11	exon	ENSMUSG00000018581	NonProperStrand	10	1	-11.4509
chr2	168460378	168463002	protein_coding	Atp9a	exon	ENSMUSG00000027546	ProperStrand	16	chr4	138011172	138011189	protein_coding	Camk2n1	exon	ENSMUSG00000046447	NonProperStrand	1	1	-inf
chr14	31826494	31826510	protein_coding	Gnl3	exon	ENSMUSG00000042354	NonProperStrand	59	chr9	40612884	40612920	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	1	-9.5775
chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	chr13	45008576	45008640	protein_coding	Jarid2	exon	ENSMUSG00000038518	ProperStrand	372	1	-5.7791
chr3	144240698	144257876	protein_coding	Sep15	exon	ENSMUSG00000037072	ProperStrand	19	chr4	131908687	131908708	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.0948
chr2	18081168	18081197	protein_coding	Mllt10	exon	ENSMUSG00000026743	ProperStrand	30	chr2	26494708	26494836	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	3	-10.6420
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	3	-2.4923
chrX	71556799	71556899	protein_coding	Gdi1	utr3	ENSMUSG00000015291	ProperStrand	24	chr3	121381031	121381047	protein_coding	4930432M17Rik	intron	ENSMUSG00000074248	NonProperStrand	33	2	-20.0094
chr10	127565464	127565554	protein_coding	Baz2a	utr3	ENSMUSG00000040054	ProperStrand	274	chr15	34370550	34370630	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-1.0850
chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	chr11	106362304	106362378	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	2	-2.9508
chr14	56492696	56492712	lincRNA	Gm17588	exon	ENSMUSG00000090992	ProperStrand	6	chr1	153643963	153644034	protein_coding	Edem3	exon	ENSMUSG00000043019	ProperStrand	84	1	-17.3924
chr9	30235085	30235102	protein_coding	Snx19	exon	ENSMUSG00000031993	ProperStrand	353	chr14	76247711	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	4	-5.2078
chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr5	37420170	37420188	protein_coding	Jakmip1	intron	ENSMUSG00000063646	ProperStrand	21	1	-8.5609
chr12	33638595	33638614	lincRNA	4933406C10Rik	exon	ENSMUSG00000086543	ProperStrand	52	chr14	93575981	93575998	protein_coding	Pcdh9	intron	ENSMUSG00000055421	ProperStrand	59	1	-13.6359
chr1	173433176	173433222	protein_coding	B930036N10Rik	utr3	ENSMUSG00000091993	ProperStrand	150	chr19	12086457	12086495	tRNA	tRNA109-ValTAC	.	1392488	ProperStrand	96	1	-10.5301
chr7	149017625	149017715	LINE	L1MB3	L1	chr7L1MB3149017650	ProperStrand	1	chr7	149017417	149017497	SINE	B1_Mur3	Alu	chr7B1_Mur3149017370	NonProperStrand	1	1	-inf
chr19	4002179	4002243	protein_coding-noncoding	Nudt8	utr3	ENSMUSG00000024869	ProperStrand	1	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-inf
chr10	127962583	127962600	protein_coding	Esyt1	exon	ENSMUSG00000025366	NonProperStrand	32	chr3	96528242	96528324	snoRNA	ENSMUSG00000065669_SNORA5	.	ENSMUSG00000065669	ProperStrand	180	3	-inf
chr1	138045267	138045866	protein_coding	Kif21b	exon	ENSMUSG00000041642	ProperStrand	77	chr2	26494731	26494821	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.6658
chr16	75761550	75765200	protein_coding	Hspa13	exon	ENSMUSG00000032932	NonProperStrand	57	chr19	8963027	8963113	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-4.1949
chr3	85944567	85944610	snoRNA	ENSMUSG00000064390_Rnu73b	.	ENSMUSG00000064390	ProperStrand	164	chr9	15119310	15119400	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-3.2176
chr15	37936263	37937709	protein_coding	Ubr5	exon	ENSMUSG00000037487	ProperStrand	258	chr1	162967495	162967513	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-1.1099
chr9	64981511	64981527	protein_coding	Igdcc4	exon	ENSMUSG00000032816	NonProperStrand	36	chr11	62418014	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-6.5660
chr12	114290175	114290191	protein_coding	Pacs2	intron	ENSMUSG00000021143	NonProperStrand	302	chr15	79908957	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-2.4770
chr3	97817679	97851652	protein_coding	Notch2	exon	ENSMUSG00000027878	ProperStrand	86	chr9	103401280	103401296	protein_coding	Tmem108	exon	ENSMUSG00000042757	NonProperStrand	323	1	-9.2181
chrX	50564728	50564747	protein_coding	Plac1	intron	ENSMUSG00000061082	ProperStrand	3	chr7	29136525	29136575	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-8.4253
chr1	141319671	141319687	protein_coding	Zbtb41	utr5	ENSMUSG00000033964	NonProperStrand	145	chr7	116663633	116663679	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.1527
chr15	82980138	82980192	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr9	65044376	65044422	snRNA	ENSMUSG00000075763_U5	.	ENSMUSG00000075763	ProperStrand	216	3	-11.0061
chr4	58301755	58301845	protein_coding	Musk	intron	ENSMUSG00000057280	ProperStrand	9	chr2	155905860	155905940	protein_coding	Cpne1	intron	ENSMUSG00000074643	ProperStrand	10	1	-19.2734
mmu-miR-2137	0	21	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-5.2630
chr4	133275515	133276491	protein_coding	Arid1a	exon	ENSMUSG00000007880	ProperStrand	465	chr11	6520350	6520440	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	1	-3.7424
chr11	6428089	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr19	12085589	12085607	tRNA	tRNA638-LeuTAA	.	656025	ProperStrand	9	1	-6.9084
chr6	33591323	33591423	protein_coding	Exoc4	intron	ENSMUSG00000029763	ProperStrand	120	chr9	15119733	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.5126
chr9	95216410	95216500	DNA	MER33	MER1_type	chr9MER3395216314	ProperStrand	1	chr1	12658289	12658379	lincRNA	Gm17644	exon	ENSMUSG00000066918	ProperStrand	10	1	-inf
chr13	47200992	47201038	protein_coding	Dek	exon	ENSMUSG00000021377	ProperStrand	36	chr7	20394091	20394109	protein_coding	Bcl3	utr3	ENSMUSG00000053175	ProperStrand	10	1	-17.9441
chr2	90235313	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	53172492	53172553	protein_coding	Tmem143	utr3	ENSMUSG00000002781	ProperStrand	9	1	-8.2671
chr12	106329819	106329899	LINE	L1MB3	L1	chr12L1MB3106329681	NonProperStrand	1	chr12	106329948	106330038	LTR	MTD	MaLR	chr12MTD106329949	NonProperStrand	1	1	-inf
chr11	32113274	32113291	protein_coding	Rhbdf1	exon	ENSMUSG00000020282	ProperStrand	23	chr9	120039546	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-5.1432
chr13	9833559	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr17	32473449	32473549	protein_coding	Akap8l	exon	ENSMUSG00000002625	ProperStrand	10	1	-8.5576
chr5	118694996	118695012	protein_coding	Rnft2	utr5	ENSMUSG00000032850	ProperStrand	3	chr9	15119661	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-8.7352
chr6	71832638	71832718	protein_coding	Ptcd3	intron	ENSMUSG00000063884	ProperStrand	34	chr19	8963066	8963158	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	4	-11.2090
chr11	4956158	4956174	protein_coding	Gas2l1	utr3	ENSMUSG00000034201	ProperStrand	33	chr12	17552949	17553029	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-6.2642
chr7	117189863	117189943	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr17	35089181	35089232	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	3	-0.8434
chr7	19591412	19591428	protein_coding	Irf2bp1	exon	ENSMUSG00000044030	NonProperStrand	81	chr8	129468746	129468876	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	2	-6.4863
chr11	43495518	43495536	protein_coding	Pwwp2a	utr5	ENSMUSG00000044950	NonProperStrand	18	chr9	15118245	15118306	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-5.7882
chr10	77108005	77108034	protein_coding	Ube2g2	utr3	ENSMUSG00000009293	ProperStrand	4	chr16	23110966	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.6489
chr7	20157300	20157400	protein_coding	Gemin7	intron	ENSMUSG00000044709	ProperStrand	4	chr10	23505152	23505217	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-6.2798
chr4	129195083	129195113	protein_coding	Hdac1	exon	ENSMUSG00000028800	ProperStrand	49	chr8	32260335	32260435	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-5.0210
chr15	103154508	103154588	protein_coding	Zfp385a	intron	ENSMUSG00000000552	ProperStrand	9	chr11	4074113	4074203	protein_coding	Sf3a1	exon	ENSMUSG00000002129	ProperStrand	78	1	-16.6748
chr6	115757992	115758119	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr2	130103799	130103822	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	6	-8.9925
chr1	136588493	136588511	LINE	L1ME2	L1	chr1L1ME2136588440	NonProperStrand	2	chr16	23110912	23110956	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr14	77424372	77424388	protein_coding	9030625A04Rik	utr3	ENSMUSG00000044350	NonProperStrand	152	chr11	6428103	6428156	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.6350
chrX	147436793	147438136	protein_coding	Gnl3l	exon	ENSMUSG00000025266	ProperStrand	52	chr2	178155566	178155585	protein_coding	9030418K01Rik	exon	ENSMUSG00000070476	ProperStrand	6	5	-19.2130
chr12	47505853	47505872	LTR	MLT1A1	MaLR	chr12MLT1A147505856	NonProperStrand	5	chr7	116664841	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-7.4478
chr7	142888905	142888949	protein_coding	Mki67	exon	ENSMUSG00000031004	ProperStrand	286	chr15	26523516	26523532	protein_coding	Fbxl7	intron	ENSMUSG00000043556	ProperStrand	8	1	-14.3208
chr13	101545668	101545700	protein_coding	Cenph	exon	ENSMUSG00000045273	ProperStrand	5	chr1	88252838	88252864	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-11.7839
chr6	83318070	83318086	protein_coding	Tet3	exon	ENSMUSG00000034832	NonProperStrand	93	chr2	130101971	130102033	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-4.5108
chr11	69266813	69266830	protein_coding	Dnahc2	exon	ENSMUSG00000005237	ProperStrand	95	chr15	5068425	5068480	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	2	-8.4941
chr17	4082194	4082231	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr13	114156292	114156347	protein_coding	BC067074	exon	ENSMUSG00000021763	ProperStrand	14	2	-inf
chr7	27973942	27974436	protein_coding	Snrpa	exon	ENSMUSG00000061479	ProperStrand	56	chr1	88247795	88247875	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-5.2310
chr7	148587514	148587554	protein_coding	Taldo1	exon	ENSMUSG00000025503	ProperStrand	28	chr2	130102069	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-6.8646
chr14	76521069	76521169	protein_coding	Nufip1	intron	ENSMUSG00000022009	ProperStrand	12	chr14	76247795	76247840	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-7.3616
chr1	58228679	58228696	protein_coding	Aox3	exon	ENSMUSG00000064294	ProperStrand	39	chr14	76247711	76247773	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-4.9994
chr12	60235145	60235180	snoRNA	ENSMUSG00000077505_SNORA26	.	ENSMUSG00000077505	ProperStrand	82	chr14	33005037	33005092	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	2	-5.8218
chr6	134097815	134097831	protein_coding	Etv6	intron	ENSMUSG00000030199	NonProperStrand	77	chr4	133040597	133040617	protein_coding	Fam46b	intron	ENSMUSG00000046694	NonProperStrand	1	1	-inf
chr16	23110986	23111010	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	3	-1.7123
chr2	26493365	26493485	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr11	74718931	74719009	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	11	-13.5169
chr7	117189933	117190058	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	chr9	85366452	85366478	snoRNA	ENSMUSG00000065274_SNORA42	.	ENSMUSG00000065274	ProperStrand	6	1	-7.9273
chr11	115940489	115940505	protein_coding	Wbp2	utr3	ENSMUSG00000034341	ProperStrand	39	chr9	75236813	75236896	protein_coding	Mapk6	exon	ENSMUSG00000042688	ProperStrand	25	2	-19.5086
chr3	90161918	90162008	protein_coding	Gatad2b	utr3	ENSMUSG00000042390	ProperStrand	21	chr16	23111389	23111469	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.9586
chr3	41419136	41419192	protein_coding	Phf17	utr3	ENSMUSG00000025764	ProperStrand	101	chr9	15119658	15119758	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.7723
chr9	54359884	54359974	LTR	MTD	MaLR	chr9MTD54359775	NonProperStrand	1	chr9	54360040	54360120	SINE	B2_Mm2	B2	chr9B2_Mm254360000	NonProperStrand	1	1	-inf
chr14	70107181	70107198	protein_coding	R3hcc1	utr5	ENSMUSG00000034194	ProperStrand	12	chr9	15119632	15119714	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.6882
chr11	102294590	102294607	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr7	38354919	38354935	protein_coding	Zfp536	exon	ENSMUSG00000043456	NonProperStrand	236	1	-6.1747
chr3	129533555	129533602	protein_coding	Gar1	exon	ENSMUSG00000028010	ProperStrand	10	chr1	89673687	89673777	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-6.7666
chr19	61301464	61301481	protein_coding	Csf2ra	exon	ENSMUSG00000059326	ProperStrand	17	chr4	131908811	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.3002
chr16	8708906	8708972	protein_coding	Usp7	intron	ENSMUSG00000022710	ProperStrand	118	chr9	64023701	64023746	snoRNA	ENSMUSG00000064918_SNORD18	.	ENSMUSG00000064918	ProperStrand	370	1	-8.3155
chr6	28835009	28835061	protein_coding	Snd1	exon	ENSMUSG00000001424	ProperStrand	210	chr11	78086787	78086944	protein_coding	2610507B11Rik	exon	ENSMUSG00000010277	ProperStrand	246	1	-7.9794
chr5	123001044	123001060	protein_coding	Ift81	exon	ENSMUSG00000029469	ProperStrand	14	chr9	15121062	15121088	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	1	-12.6687
chr5	65782204	65782636	protein_coding	Rpl9	utr5	ENSMUSG00000047215	ProperStrand	113	chr15	79908957	79908984	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-4.2541
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr11	23195983	23196083	protein_coding	Xpo1	exon	ENSMUSG00000020290	ProperStrand	123	1	-3.5960
chr11	95753096	95753114	protein_coding	B4galnt2	exon	ENSMUSG00000013418	ProperStrand	4	chr1	145626057	145626077	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-14.5059
chr3	124872294	124872383	LINE	L1_Mm	L1	chr3L1_Mm124872280	NonProperStrand	1	chr3	124871865	124871945	LINE	Lx	L1	chr3Lx124871714	NonProperStrand	1	1	-inf
chr15	84873279	84873379	protein_coding	Fam118a	intron	ENSMUSG00000022434	ProperStrand	44	chr16	23111776	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-4.2851
chr7	125262602	125262626	protein_coding	Arl6ip1	utr3	ENSMUSG00000030654	ProperStrand	57	chr18	35716685	35716761	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-6.0866
chr11	40523757	40527548	protein_coding	Hmmr	exon	ENSMUSG00000020330	ProperStrand	61	chrX	34622927	34623007	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-3.1413
chr13	49779591	49779654	protein_coding	Iars	intron	ENSMUSG00000037851	ProperStrand	95	chr10	23505195	23505284	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-2.3938
chr13	93616874	93617514	protein_coding	Mtx3	exon	ENSMUSG00000021704	ProperStrand	3	chr6	134780323	134780339	protein_coding	Crebl2	utr5	ENSMUSG00000032652	ProperStrand	41	1	-inf
chr4	89692463	89692484	LTR	ERVL-B4-int	ERVL	chr4ERVL-B4-int89692283	ProperStrand	3	chr17	23957552	23957637	protein_coding	Srrm2	utr3	ENSMUSG00000039218	ProperStrand	521	3	-inf
chr1	37265501	37265518	SINE	B3	B2	chr1B337265375	NonProperStrand	1	mmu-miR-6239	0	17	miRNA	mmu-miR-6239	.	mmu-miR-6239	ProperStrand	31	1	-inf
chr2	24825186	24827046	protein_coding	Wdr85	exon	ENSMUSG00000026975	ProperStrand	323	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-8.3173
chr4	103043496	103043539	protein_coding	Oma1	intron	ENSMUSG00000035069	ProperStrand	19	chr7	118219574	118219606	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-6.4226
chr4	140723745	140723761	protein_coding	Fbxo42	exon	ENSMUSG00000028920	ProperStrand	91	chr7	134671387	134671462	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-7.0427
chr19	8799026	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	chr5	130295414	130295533	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	5	-1.1648
chr11	8335871	8337163	protein_coding	Tns3	exon	ENSMUSG00000020422	ProperStrand	81	chr19	8800463	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-2.9858
chr4	44147802	44147820	protein_coding	Rnf38	exon	ENSMUSG00000035696	ProperStrand	66	chr15	82980102	82980225	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	8	-20.9163
chr7	135020488	135020510	protein_coding	Zfp646	utr5	ENSMUSG00000049739	ProperStrand	29	chr16	23110913	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0921
chr11	97642992	97643088	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	chr15	57978169	57978212	snoRNA	ENSMUSG00000080461_SNORA11	.	ENSMUSG00000080461	ProperStrand	171	1	-0.9150
chr12	111891499	111891588	protein_coding	Dync1h1	intron	ENSMUSG00000018707	ProperStrand	648	chrX	99381902	99382740	protein_coding	Rps4x	exon	ENSMUSG00000031320	ProperStrand	139	1	-6.8803
chr3	105265054	105265072	protein_coding	Kcnd3	intron	ENSMUSG00000040896	NonProperStrand	44	chr6	71832629	71832687	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-6.2218
chr7	126862721	126862811	protein_coding	Thumpd1	exon	ENSMUSG00000030942	ProperStrand	14	chr3	68889168	68889235	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-6.0690
chr1	88426122	88426327	protein_coding	Ptma	exon	ENSMUSG00000026238	ProperStrand	385	chr6	119316083	119316126	protein_coding	Adipor2	intron	ENSMUSG00000030168	ProperStrand	79	1	-9.0381
chr7	28049894	28049984	protein_coding	Numbl	exon	ENSMUSG00000063160	ProperStrand	35	chr9	15119651	15119731	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.6006
chr13	49779749	49779803	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	chr1	9932560	9932625	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-1.8386
chr17	46814084	46814100	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr14	55027597	55027649	protein_coding	Slc7a7	exon	ENSMUSG00000000958	ProperStrand	44	1	-9.8546
chr9	108273283	108273305	protein_coding	Usp4	exon	ENSMUSG00000032612	ProperStrand	29	chr17	24857641	24857963	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	4	-inf
chr4	130321903	130324753	protein_coding	Pum1	exon	ENSMUSG00000028580	ProperStrand	131	chr1	89673606	89673686	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-1.9256
chr16	56443410	56443500	LINE	L1_Mus3	L1	chr16L1_Mus356442582	NonProperStrand	1	chr2	109603999	109604089	LINE	L1_Mus2	L1	chr2L1_Mus2109603878	NonProperStrand	1	1	-inf
chr12	112866077	112866435	protein_coding	Mark3	exon	ENSMUSG00000007411	ProperStrand	37	chr14	63287575	63287615	protein_coding	Serpine3	intron	ENSMUSG00000091155	ProperStrand	210	3	-inf
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chrX	143918835	143918902	snoRNA	ENSMUSG00000084421_SNORA35	.	ENSMUSG00000084421	ProperStrand	293	1	-4.6316
chr17	81344133	81344150	protein_coding	Tmem178	exon	ENSMUSG00000024245	ProperStrand	67	chr2	158182232	158182291	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-4.7894
chr6	124662555	124662575	protein_coding	Phb2	exon	ENSMUSG00000004264	ProperStrand	43	chr12	111839884	111839984	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	1	-9.2220
chr13	21612816	21617008	protein_coding	Zfp192	exon	ENSMUSG00000063894	ProperStrand	12	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-9.1155
chr6	21088699	21088789	LINE	Lx	L1	chr6Lx21088662	NonProperStrand	1	chr18	9877361	9877441	protein_coding	Colec12	utr3	ENSMUSG00000036103	NonProperStrand	10	1	-inf
chr9	69972993	69973998	protein_coding	Fam81a	exon	ENSMUSG00000032224	ProperStrand	59	chr3	108357386	108357443	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-4.5722
chr12	73846845	73846865	LTR	RMER10A	ERVL	chr12RMER10A73846570	ProperStrand	1	chr7	148634722	148634812	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-inf
chr19	8963227	8963254	miRNA	Mir5136	.	ENSMUSG00000093314	ProperStrand	45	chr11	77996558	77996607	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	2	-10.7658
chr7	146684406	146684425	protein_coding	Inpp5a	intron	ENSMUSG00000025477	ProperStrand	166	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-5.7287
chr15	75906125	75906215	protein_coding	Puf60	intron	ENSMUSG00000002524	ProperStrand	18	chr8	32260360	32260440	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-7.0098
chr2	129998643	129998713	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr6	114900484	114900549	protein_coding	Vgll4	intron	ENSMUSG00000030315	ProperStrand	12	4	-inf
chr4	116991019	116991036	protein_coding	Rnf220	intron	ENSMUSG00000028677	ProperStrand	131	chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-4.9285
chrX	153666841	153666931	protein_coding	Phex	intron	ENSMUSG00000057457	NonProperStrand	5	chr13	120253405	120253495	protein_coding	4833420G17Rik	intron	ENSMUSG00000062822	NonProperStrand	341	1	-14.9864
chr11	32524151	32524170	protein_coding	Stk10	utr3	ENSMUSG00000020272	ProperStrand	11	chr13	97968198	97968246	protein_coding	Hexb	utr5	ENSMUSG00000021665	ProperStrand	22	1	-19.1540
chr7	133939532	133939592	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	chr19	8798525	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-1.9296
chr5	118637004	118637037	protein_coding	Hrk	utr3	ENSMUSG00000046607	ProperStrand	6	chr9	120038499	120038535	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-7.6033
chr19	8986375	8986426	protein_coding	Ganab	exon	ENSMUSG00000071650	ProperStrand	145	chr5	108336363	108336432	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	5	-13.9128
chr6	74292155	74292174	Other	RMER1A	Other	chr6RMER1A74291618	ProperStrand	2	chr4	131865855	131865917	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-8.7800
chr2	25563070	25563086	antisense	A230005M16Rik	.	ENSMUSG00000087612	ProperStrand	103	chr1	39605591	39605658	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-6.2734
chr7	106627900	106627965	protein_coding	Rps3	exon	ENSMUSG00000030744	ProperStrand	159	chr2	26493381	26493481	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-2.0342
chr16	32680829	32681021	protein_coding	Tnk2	exon	ENSMUSG00000022791	ProperStrand	86	chr2	26494708	26494741	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.4757
chr16	65682781	65682871	LINE	L1_Mus4	L1	chr16L1_Mus465682385	NonProperStrand	1	chr4	76827956	76828036	protein_coding	Ptprd	intron	ENSMUSG00000028399	NonProperStrand	29	1	-inf
chr1	166192762	166192852	protein_coding	Slc19a2	exon	ENSMUSG00000040918	ProperStrand	22	chr19	8963096	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.0882
chr10	127282026	127282042	protein_coding-noncoding	Rdh16	utr3	ENSMUSG00000069456	ProperStrand	1	chr1	162965537	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-inf
chr9	21637355	21637371	protein_coding	Dock6	exon	ENSMUSG00000032198	ProperStrand	155	chr7	148634779	148634829	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-2.2902
chrX	71202011	71202781	protein_coding	Hcfc1	exon	ENSMUSG00000031386	ProperStrand	424	chr11	6428065	6428120	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-1.6473
chr17	30933173	30933190	protein_coding	Dnahc8	intron	ENSMUSG00000033826	NonProperStrand	40	chr9	53822997	53823014	protein_coding	Elmod1	utr5	ENSMUSG00000041986	ProperStrand	1	1	-inf
chr8	64017614	64028377	protein_coding	Palld	exon	ENSMUSG00000058056	NonProperStrand	125	chr1	88247743	88247795	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	3	-9.1030
chr2	90235294	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr14	49092131	49092148	protein_coding	6720456H20Rik	exon	ENSMUSG00000036339	ProperStrand	28	1	-5.9497
chr13	113647152	113647183	protein_coding	Ppap2a	exon	ENSMUSG00000021759	ProperStrand	4	chr19	8963026	8963082	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-7.6308
chr3	89903692	89903782	protein_coding	Tpm3	utr3	ENSMUSG00000027940	ProperStrand	55	chr17	24665455	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-5.1094
chr5	111121066	111121209	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	chr8	73419657	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	16	-3.2839
chr6	93765818	93862891	protein_coding	Magi1	intron	ENSMUSG00000045095	NonProperStrand	47	chr7	117166755	117166855	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-5.2899
chr12	86283361	86283441	protein_coding	1110018G07Rik	intron	ENSMUSG00000042350	ProperStrand	13	chr14	11186166	11186256	protein_coding	Fhit	intron	ENSMUSG00000060579	ProperStrand	32	1	-17.6917
chr4	43505688	43505723	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr9	103950068	103950086	protein_coding	Uba5	intron	ENSMUSG00000032557	ProperStrand	111	1	-2.0187
chr11	84646547	84646637	protein_coding	Ggnbp2	exon	ENSMUSG00000020530	ProperStrand	30	chr3	68889043	68889123	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-4.5590
chr10	122002969	122003059	LINE	L1Md_F2	L1	chr10L1Md_F2122002095	ProperStrand	17	chr11	28960167	28960257	LINE	L1Md_F2	L1	chr11L1Md_F228957284	ProperStrand	2	1	-inf
chr10	61212109	61214453	protein_coding	H2afy2	exon	ENSMUSG00000020086	ProperStrand	16	chr11	62416575	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	4	-20.6193
chr15	98369365	98369391	protein_coding	Ccnt1	utr3	ENSMUSG00000011960	ProperStrand	14	chr12	29316587	29318654	protein_coding	Rps7	exon	ENSMUSG00000061477	ProperStrand	129	1	-14.7565
chr6	87769189	87769558	protein_coding	Isy1	exon	ENSMUSG00000030056	ProperStrand	172	chr19	8799021	8799083	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-3.8126
chr5	123590382	123590463	lincRNA	AI480526	intron	ENSMUSG00000090086	ProperStrand	2	chr16	23110867	23110957	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr7	129199215	129199246	protein_coding	Ears2	exon	ENSMUSG00000030871	ProperStrand	10	chr3	68889179	68889271	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	8	-20.0470
chr10	62044232	62044258	protein_coding	Ddx21	utr3	ENSMUSG00000020075	ProperStrand	137	chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	1	-7.1830
chr18	24772342	24772375	protein_coding	Elp2	intron	ENSMUSG00000024271	ProperStrand	46	chr11	97642952	97643074	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.9356
chr11	72262269	72262359	protein_coding	Mybbp1a	exon	ENSMUSG00000040463	ProperStrand	279	chr4	131865381	131865461	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-1.3918
chr7	123476684	123476771	snoRNA	ENSMUSG00000064741_Snord14a	.	ENSMUSG00000064741	ProperStrand	83	chr1	162967540	162967566	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-2.8889
chr18	10052131	10052153	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr11	45723144	45723160	protein_coding	Clint1	utr3	ENSMUSG00000006169	NonProperStrand	273	2	-9.4386
chr11	78042151	78042251	protein_coding	Supt6h	exon	ENSMUSG00000002052	ProperStrand	119	chr6	122679031	122679062	protein_coding	Slc2a3	utr3	ENSMUSG00000003153	ProperStrand	682	1	-7.0868
chr17	66275371	66275403	protein_coding	Twsg1	utr3	ENSMUSG00000024098	ProperStrand	22	chr6	96426014	96426032	protein_coding	Fam19a1	intron	ENSMUSG00000059187	NonProperStrand	60	1	-15.3542
chr8	87195448	87195520	protein_coding	Nacc1	utr3	ENSMUSG00000001910	ProperStrand	130	chr19	8963027	8963048	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.1115
chr2	129998670	129998715	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr11	62416578	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	4	-3.9740
chr7	150717298	150717425	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	chr2	166889036	166889056	snoRNA	ENSMUSG00000077515_SNORD12	.	ENSMUSG00000077515	ProperStrand	191	1	-3.3134
chr1	75484537	75484553	protein_coding	Obsl1	exon	ENSMUSG00000026211	NonProperStrand	192	chr2	165638269	165638332	protein_coding	Zmynd8	exon	ENSMUSG00000039671	ProperStrand	81	1	-10.3770
chr1	121367153	121367179	protein_coding	Ralb	utr3	ENSMUSG00000004451	ProperStrand	17	chr3	89009743	89009759	protein_coding	Gba	exon	ENSMUSG00000028048	NonProperStrand	88	1	-15.1044
chr18	42708187	42709519	protein_coding	Tcerg1	exon	ENSMUSG00000024498	ProperStrand	210	chr1	172975141	172975189	tRNA	tRNA699-GlyGCC	.	74010	ProperStrand	660	2	-9.7923
chr11	84722944	84722961	protein_coding	Myo19	exon	ENSMUSG00000020527	ProperStrand	82	chr3	89009743	89009759	protein_coding	Gba	exon	ENSMUSG00000028048	NonProperStrand	88	1	-11.9155
chr14	21502680	21503118	protein_coding	Sec24c	exon	ENSMUSG00000039367	ProperStrand	60	chr4	116826699	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	3	-15.3750
chr15	98924269	98924291	protein_coding	Dnajc22	intron	ENSMUSG00000038009	NonProperStrand	10	chr2	26494727	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-6.5951
chr15	25730940	25730996	protein_coding	Myo10	exon	ENSMUSG00000022272	ProperStrand	168	chr8	87525221	87525238	protein_coding	Hook2	exon	ENSMUSG00000052566	ProperStrand	204	1	-8.7963
chr13	12493404	12493736	protein_coding	Heatr1	exon	ENSMUSG00000050244	ProperStrand	74	chr17	24857721	24857811	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-3.5452
chr16	31881961	31882051	protein_coding	Mfi2	exon	ENSMUSG00000022780	ProperStrand	10	chr10	110918559	110918639	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	5	-inf
chr5	140227551	140227727	protein_coding	Ints1	exon	ENSMUSG00000029547	ProperStrand	45	chr9	15119650	15119969	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	5	-13.8187
chr2	93832755	93832845	protein_coding	Alkbh3	intron	ENSMUSG00000040174	NonProperStrand	2	chr2	92853535	92853625	protein_coding	Prdm11	utr5	ENSMUSG00000075028	NonProperStrand	6	1	-inf
chr13	21809854	21809936	protein_coding	Hist1h3h	exon	ENSMUSG00000069312	ProperStrand	10	chr16	87419153	87419192	snoRNA	ENSMUSG00000065647_SNORA2	.	ENSMUSG00000065647	ProperStrand	123	1	-15.5447
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr12	112779150	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	11	-9.9891
chr6	39091825	39091853	protein_coding	Jhdm1d	utr3	ENSMUSG00000042599	ProperStrand	14	chr16	23110852	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.2008
chr15	96839095	96839133	protein_coding	Slc38a4	exon	ENSMUSG00000022464	ProperStrand	139	chr7	134448633	134448650	protein_coding	Itgal	intron	ENSMUSG00000030830	NonProperStrand	4	1	-17.2651
chr18	83625632	83625649	SINE	B4	B4	chr18B483625534	ProperStrand	4	chr1	162966813	162966830	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-11.9060
chr6	122682830	122682879	protein_coding	Slc2a3	exon	ENSMUSG00000003153	ProperStrand	682	chr7	118219574	118219594	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-1.0183
chr10	80004756	80004802	protein_coding	Rexo1	utr3	ENSMUSG00000047417	ProperStrand	46	chr16	23111452	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-4.7540
chr7	26472435	26472451	protein_coding	Tgfb1	utr5	ENSMUSG00000002603	NonProperStrand	154	chr6	71832660	71832685	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-3.8070
chr4	49549095	49549114	protein_coding	Aldob	utr3	ENSMUSG00000028307	ProperStrand	1	chr17	24857715	24857733	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-inf
chrX	71473203	71473268	protein_coding	Flna	exon	ENSMUSG00000031328	ProperStrand	134	chr12	106269290	106269390	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	3	-6.9552
chr8	91343853	91343872	DNA	Charlie10	MER1_type	chr8Charlie1091343828	ProperStrand	23	chrX	84483731	84483750	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-10.1849
chr18	10052131	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr11	78012967	78013057	protein_coding	Proca1	intron	ENSMUSG00000044122	ProperStrand	5	4	-19.7303
chr3	16083807	16083897	protein_coding	Ythdf3	intron	ENSMUSG00000047213	ProperStrand	22	chr7	117166721	117166801	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-6.7961
chr11	115292451	115292502	protein_coding	Kctd2	utr3	ENSMUSG00000016940	ProperStrand	4	chr7	73316623	73316723	protein_coding	Chsy1	exon	ENSMUSG00000032640	ProperStrand	25	1	-19.1451
chr1	163000408	163000474	protein_coding	Dars2	utr5	ENSMUSG00000026709	ProperStrand	14	chr2	27315059	27315159	protein_coding	Brd3	exon	ENSMUSG00000026918	ProperStrand	85	1	-15.5728
mmu-miR-759	2	19	miRNA	mmu-miR-759	.	mmu-miR-759	ProperStrand	7	chr8	129468746	129468846	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	7	-inf
chr4	138404771	138404788	protein_coding	Pla2g5	intron	ENSMUSG00000041193	ProperStrand	5	chr16	23111449	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-5.8178
chr2	103615833	103616101	protein_coding	Caprin1	exon	ENSMUSG00000027184	NonProperStrand	2	chr8	73419707	73419774	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	NonProperStrand	53	1	-inf
chr17	12463894	12463974	protein_coding	Map3k4	exon	ENSMUSG00000014426	ProperStrand	36	chr13	93070432	93070522	protein_coding	Msh3	intron	ENSMUSG00000014850	ProperStrand	10	1	-17.9441
chr9	108465621	108465761	protein_coding	Impdh2	exon	ENSMUSG00000062867	ProperStrand	74	chr11	97643000	97643090	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.1210
chr10	122439925	122443123	protein_coding	Mon2	exon	ENSMUSG00000034602	ProperStrand	28	chr16	23111748	23111828	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-5.5476
chr5	96670734	96670796	protein_coding	Mrpl1	intron	ENSMUSG00000029486	ProperStrand	23	chr12	112779255	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	2	-10.8055
chr5	144470583	144470636	protein_coding	Cyth3	utr3	ENSMUSG00000018001	ProperStrand	7	chr6	95079427	95079443	protein_coding	Kbtbd8	utr3	ENSMUSG00000030031	ProperStrand	26	1	-19.4899
chr11	68887004	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	chr2	130103432	130103472	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	2	-0.7105
chr9	34978825	34983360	protein_coding	Dcps	exon	ENSMUSG00000032040	ProperStrand	38	chr15	79913306	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.4538
chr12	64904387	64904406	SINE	RSINE1	B4	chr12RSINE164904306	NonProperStrand	7	chr8	73419713	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-17.3305
chr19	43579408	43579425	protein_coding	Got1	intron	ENSMUSG00000025190	NonProperStrand	147	chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-4.7073
chr10	118676911	118677001	protein_coding	Cand1	utr5	ENSMUSG00000020114	ProperStrand	76	chr8	32260343	32260424	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	3	-10.1055
chr8	64017614	64028377	protein_coding	Palld	exon	ENSMUSG00000058056	NonProperStrand	125	chr4	131865381	131865471	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-2.6704
chr13	9833551	9833654	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr13	51743567	51743690	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	3	-0.9426
chr4	140723745	140723761	protein_coding	Fbxo42	exon	ENSMUSG00000028920	ProperStrand	91	chr1	162965980	162965998	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-2.8502
chr4	138953394	139016102	protein_coding	Ubr4	exon	ENSMUSG00000066036	ProperStrand	304	chr9	120039591	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-1.6405
chr19	3855004	3855026	protein_coding	Chka	intron	ENSMUSG00000024843	ProperStrand	17	chr4	136834257	136834274	protein_coding	Wnt4	intron	ENSMUSG00000036856	NonProperStrand	1	1	-inf
chr11	51640158	51641848	protein_coding	Phf15	exon	ENSMUSG00000020387	ProperStrand	4	chr16	23111389	23111446	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-6.3168
chr17	17870759	17870791	protein_coding	Vmn2r90	exon	ENSMUSG00000092120	NonProperStrand	3	chr11	6428088	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-inf
chr7	4745732	4746047	protein_coding	Rpl28	exon	ENSMUSG00000030432	ProperStrand	220	chr1	59539683	59539700	protein_coding	Fzd7	utr5	ENSMUSG00000041075	ProperStrand	373	1	-7.0625
chr7	75088274	75088290	LINE	L1MC3	L1	chr7L1MC375088207	ProperStrand	1	chr19	8800356	8800446	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-inf
chr10	43666553	43666576	protein_coding	Rtn4ip1	utr3	ENSMUSG00000019864	ProperStrand	14	chr2	26494708	26494775	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	3	-13.8811
chr15	89181754	89181803	protein_coding	Lmf2	utr3	ENSMUSG00000022614	ProperStrand	19	chr2	91770103	91770131	protein_coding	Mdk	utr3	ENSMUSG00000027239	ProperStrand	56	1	-15.7787
chr12	57990715	57990731	protein_coding	Slc25a21	intron	ENSMUSG00000035472	ProperStrand	8	chr6	57712505	57712521	protein_coding	Vopp1	exon	ENSMUSG00000037788	NonProperStrand	21	1	-18.3903
chr5	115940291	115940379	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	chr2	26493366	26493424	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	9	-8.7834
chr13	85104387	85104477	LINE	L1Md_A	L1	chr13L1Md_A85103460	ProperStrand	1	chr9	19462431	19462511	LINE	L1Md_A	L1	chr9L1Md_A19461964	ProperStrand	81	1	-inf
chr2	37327869	37327900	protein_coding	Rabgap1	exon	ENSMUSG00000035437	ProperStrand	20	chr10	110918647	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-5.5586
chr2	97280102	97280191	protein_coding	Lrrc4c	intron	ENSMUSG00000050587	ProperStrand	9	chr2	140138702	140138782	protein_coding	Sel1l2	intron	ENSMUSG00000074764	NonProperStrand	52	1	-17.4178
chr6	85410010	85411086	protein_coding	Cct7	exon	ENSMUSG00000030007	ProperStrand	173	chr10	5989639	5989729	protein_coding	Akap12	utr3	ENSMUSG00000038587	ProperStrand	1008	1	-5.5855
chr13	99502594	99502610	protein_coding	Fcho2	exon	ENSMUSG00000041685	ProperStrand	10	chr11	6428040	6428140	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-6.6888
chr11	69870769	69870785	protein_coding	Asgr1	exon	ENSMUSG00000020884	NonProperStrand	145	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.3147
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr10	120709244	120712786	protein_coding	Tbc1d30	exon	ENSMUSG00000052302	ProperStrand	233	1	-3.3222
chr2	129997668	129998403	protein_coding	Snrpb	exon	ENSMUSG00000027404	ProperStrand	21	chr11	69481387	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.1963
chr2	130536601	130538000	protein_coding	4930402H24Rik	exon	ENSMUSG00000027309	ProperStrand	16	chr4	131908689	131908810	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.4136
chr4	148524723	148535749	protein_coding	Pgd	utr3	ENSMUSG00000028961	ProperStrand	34	chr16	23110891	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-3.0056
chr8	108233712	108233729	protein_coding	4933405L10Rik	exon	ENSMUSG00000013158	ProperStrand	94	chr4	140551528	140552218	protein_coding	Atp13a2	exon	ENSMUSG00000036622	ProperStrand	39	1	-13.2775
chr15	84771781	84771804	protein_coding	Nup50	utr3	ENSMUSG00000016619	ProperStrand	39	chr19	59299960	59299976	protein_coding	Kcnk18	exon	ENSMUSG00000040901	ProperStrand	12	1	-17.3420
chr11	30701122	30701146	protein_coding	Psme4	intron	ENSMUSG00000040850	ProperStrand	40	chr7	52378396	52378481	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	1	-9.3191
chr9	104020168	104020185	protein_coding	Acad11	intron	ENSMUSG00000090150	ProperStrand	17	chr16	23110454	23110532	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.8009
chr3	100844680	100844720	protein_coding	Ptgfrn	utr3	ENSMUSG00000027864	ProperStrand	67	chr12	106269465	106269555	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-3.9325
chr7	53089954	53089975	protein_coding	Grin2d	intron	ENSMUSG00000002771	NonProperStrand	31	chrX	34622906	34622992	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-4.4053
chr1	134465558	134465574	protein_coding	Nfasc	utr3	ENSMUSG00000026442	NonProperStrand	48	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-9.3750
chr1	34245186	34245216	protein_coding	Dst	utr5	ENSMUSG00000026131	ProperStrand	461	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-3.7677
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr19	8798517	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-0.7602
chr10	80641693	80641735	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	chr11	62418049	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	2	-1.4890
chr19	9079498	9079574	protein_coding	Ahnak	exon	ENSMUSG00000069833	ProperStrand	103	chr19	8800358	8800448	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-2.5655
chr2	90857331	90858611	protein_coding	Celf1	utr3	ENSMUSG00000005506	ProperStrand	61	chr1	88247738	88247799	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	8	-19.1554
chr5	149111666	149111684	protein_coding	Mtus2	intron	ENSMUSG00000029651	ProperStrand	114	chr1	89681327	89681380	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-4.2067
chr11	77996561	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	chr5	108334242	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	7	-2.0025
chr2	32818107	32818137	protein_coding	Rpl12	exon	ENSMUSG00000038900	ProperStrand	167	chr7	51505224	51505308	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	3	-14.0254
chr15	102239960	102240060	protein_coding	Sp1	exon	ENSMUSG00000001280	ProperStrand	124	chr15	37929719	37929741	protein_coding	Ubr5	exon	ENSMUSG00000037487	ProperStrand	258	6	-inf
chr2	80297373	80297389	LINE	L1MB8	L1	chr2L1MB880297262	ProperStrand	53	chr12	85514311	85514327	protein_coding	C130039O16Rik	exon	ENSMUSG00000042507	ProperStrand	75	1	-13.1157
chr1	20990587	20990677	protein_coding	Tram2	utr3	ENSMUSG00000041779	ProperStrand	13	chr7	116663634	116663714	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-5.3924
chr7	132797989	132798053	protein_coding	Gtf3c1	exon	ENSMUSG00000032777	ProperStrand	161	chr2	158182156	158182195	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	5	-13.6675
chr8	72286925	72287010	protein_coding	Zfp866	utr3	ENSMUSG00000043090	ProperStrand	8	chr9	64143743	64143833	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-11.9020
chr5	77413382	77416915	protein_coding	Srp72	exon	ENSMUSG00000036323	ProperStrand	41	chr13	90238597	90238687	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	1	-9.4124
chr7	29073210	29073330	protein_coding	BC089491	exon	ENSMUSG00000046750	ProperStrand	62	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.7173
chr15	99329179	99329195	protein_coding	Faim2	utr3	ENSMUSG00000023011	ProperStrand	45	chr9	120038553	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.5633
chr13	98148951	98149041	LTR	MT2A	ERVL	chr13MT2A98148915	ProperStrand	1	chr13	98148838	98148918	SINE	B2_Mm2	B2	chr13B2_Mm298148719	NonProperStrand	1	1	-inf
chr2	145076803	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	chr2	158185553	158185654	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	4	-5.9250
chr9	67821217	67823597	protein_coding	Vps13c	exon	ENSMUSG00000035284	ProperStrand	69	chr17	35299542	35299622	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-4.5090
chr9	25059948	25059964	protein_coding	Sept7	intron	ENSMUSG00000001833	ProperStrand	101	chr7	51806186	51806741	protein_coding	Nr1h2	exon	ENSMUSG00000060601	ProperStrand	14	1	-15.2583
chr3	89891646	89891726	protein_coding-noncoding	Tpm3	utr5	ENSMUSG00000027940	ProperStrand	40	chr14	76246198	76246590	protein_coding	Tpt1	exon	ENSMUSG00000060126	ProperStrand	236	35	-19.2118
chr11	119136228	119136244	protein_coding	Gaa	exon	ENSMUSG00000025579	NonProperStrand	201	chr6	87086112	87086130	protein_coding	Antxr1	utr3	ENSMUSG00000033420	ProperStrand	70	2	-16.6492
chr2	181450622	181451208	protein_coding	Oprl1	exon	ENSMUSG00000027584	ProperStrand	32	chr16	23110959	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.9664
chr4	15168151	15168210	LTR	RLTR4_MM-int	ERV1	chr4RLTR4_MM-int15166052	ProperStrand	1	chr16	23110455	23110523	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-inf
chr9	40865562	40865578	protein_coding	Ubash3b	intron	ENSMUSG00000032020	ProperStrand	42	chr1	162965980	162966001	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-4.2737
chr11	115177710	115177726	protein_coding	Otop2	intron	ENSMUSG00000050201	ProperStrand	13	chr7	28061791	28061807	protein_coding	Numbl	exon	ENSMUSG00000063160	NonProperStrand	9	1	-19.9343
chr11	102294589	102294607	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr6	126075509	126075526	protein_coding	Ntf3	intron	ENSMUSG00000049107	NonProperStrand	38	1	-9.8128
chr15	100529601	100533813	protein_coding	Galnt6	exon	ENSMUSG00000037280	ProperStrand	4	chr10	23505152	23505209	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-10.6986
chr14	20975327	20975378	protein_coding	Kcnk5	intron	ENSMUSG00000023243	ProperStrand	29	chr11	62416609	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-6.6005
chr10	79606701	79606718	protein_coding	Atp5d	exon	ENSMUSG00000003072	ProperStrand	44	chr14	33005038	33005093	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-4.5838
chr2	121126285	121126375	protein_coding	Mtap1a	exon	ENSMUSG00000027254	ProperStrand	17	chr19	8963091	8963171	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.5881
chr5	54389948	54389967	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	chr16	93939640	93939656	protein_coding	Cldn14	intron	ENSMUSG00000047109	ProperStrand	10	1	-14.4479
chr10	23770362	23770378	protein_coding	Taar7f	exon	ENSMUSG00000060825	NonProperStrand	40	chr9	120038467	120038552	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.7827
chr10	122002565	122002655	LINE	L1Md_F2	L1	chr10L1Md_F2122002095	NonProperStrand	23	chr9	55867068	55867158	LINE	L1Md_F2	L1	chr9L1Md_F255866827	NonProperStrand	1	1	-inf
chr9	75473767	75473783	protein_coding	Lysmd2	exon	ENSMUSG00000032184	NonProperStrand	20	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-11.1511
chr7	29681253	29681983	protein_coding	Actn4	exon	ENSMUSG00000054808	ProperStrand	120	chr19	8800380	8800460	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-4.0972
chr17	28436712	28436776	protein_coding	Ppard	exon	ENSMUSG00000002250	ProperStrand	25	chr7	116664870	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-4.1486
chr19	41950061	41950151	protein_coding	Rrp12	intron	ENSMUSG00000035049	ProperStrand	106	chr1	152556348	152556428	protein_coding	Hmcn1	intron	ENSMUSG00000066842	ProperStrand	5	1	-17.2816
chr3	104605761	104605799	protein_coding	Mov10	exon	ENSMUSG00000002227	ProperStrand	96	chr16	29475703	29479846	protein_coding	Atp13a4	exon	ENSMUSG00000038094	ProperStrand	4	1	-17.9796
chr9	26440743	26440759	DNA	MER5A	MER1_type	chr9MER5A26440741	ProperStrand	108	chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	1	-11.3854
chr7	150717335	150717425	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	chr7	67123728	67123759	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	1	-2.0615
chr9	82762729	82762807	protein_coding	Phip	utr3	ENSMUSG00000032253	ProperStrand	43	chr7	118219574	118219595	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-4.8084
chr4	141851427	141851445	SINE	PB1D10	Alu	chr4PB1D10141851373	ProperStrand	2	chr11	69481434	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-inf
chr4	144745305	144745355	protein_coding	Vps13d	exon	ENSMUSG00000020220	ProperStrand	59	chr5	115956842	115956858	protein_coding	Pxn	utr5	ENSMUSG00000029528	ProperStrand	171	1	-11.2456
chr13	22098354	22098371	protein_coding	Prss16	intron	ENSMUSG00000006179	ProperStrand	78	chr7	133513728	133513832	protein_coding	Spns1	utr3	ENSMUSG00000030741	ProperStrand	9	1	-16.6946
chr11	104197639	104218108	protein_coding	1700081L11Rik	exon	ENSMUSG00000018412	ProperStrand	73	chr2	26494710	26494843	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-4.8114
chr7	116664154	116665202	protein_coding	Rpl27a	exon	ENSMUSG00000046364	ProperStrand	149	chr11	55296195	55296275	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-4.4156
chr7	72451418	72455975	protein_coding	Tjp1	exon	ENSMUSG00000030516	ProperStrand	78	chr2	26493400	26493455	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-3.2602
chr4	43006118	43006136	protein_coding	Vcp	exon	ENSMUSG00000028452	ProperStrand	108	chr14	76247753	76247843	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-3.0872
chr10	117227045	117227061	protein_coding	Nup107	exon	ENSMUSG00000052798	NonProperStrand	66	chr18	35716786	35716834	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.0141
chr5	99443584	99443601	protein_coding	Prkg2	intron	ENSMUSG00000029334	NonProperStrand	57	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.3697
chr11	95919669	95922287	protein_coding	Ube2z	exon	ENSMUSG00000014349	ProperStrand	41	chr5	89383967	89457318	protein_coding	Slc4a4	exon	ENSMUSG00000060961	NonProperStrand	195	1	-11.7181
chr2	90963190	90963280	protein_coding	Mybpc3	intron	ENSMUSG00000002100	ProperStrand	1	chr2	90826397	90826487	protein_coding	Celf1	intron	ENSMUSG00000005506	NonProperStrand	28	1	-inf
chr14	31976698	31976715	protein_coding	Stab1	intron	ENSMUSG00000042286	NonProperStrand	127	chr16	23110454	23110581	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.2922
chr1	93443976	93444032	protein_coding	Asb1	intron	ENSMUSG00000026311	NonProperStrand	1	chr11	69481362	69481462	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-inf
chr8	73419703	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	NonProperStrand	53	chr3	123210854	123210900	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	NonProperStrand	45	1	-14.1449
chr4	140277202	140277256	protein_coding	Rcc2	utr3	ENSMUSG00000040945	ProperStrand	228	chr15	5068448	5068480	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-3.5138
chr2	71362962	71362979	antisense	Dlx1as	.	ENSMUSG00000084946	ProperStrand	7	chr15	79912166	79912199	protein_coding	Rpl3	exon	ENSMUSG00000060036	ProperStrand	8342	1	-7.8767
chr10	127522576	127522626	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr5	145638648	145638705	protein_coding	Smurf1	utr3	ENSMUSG00000038780	ProperStrand	45	10	-20.3689
chr5	54389949	54389965	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	chr18	59441773	59441793	protein_coding	Chsy3	intron	ENSMUSG00000058152	ProperStrand	35	1	-11.8701
chr15	96249656	96249746	protein_coding	Scaf11	exon	ENSMUSG00000033228	ProperStrand	37	chr16	23110910	23110990	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-4.0730
chr12	93155126	93155216	LTR	ORR1E	MaLR	chr12ORR1E93155044	NonProperStrand	1	chr12	93154809	93154899	SINE	MIRb	MIR	chr12MIRb93154818	ProperStrand	1	1	-inf
chr12	70413651	70415416	protein_coding	Nemf	exon	ENSMUSG00000020982	ProperStrand	77	chr13	49779745	49779786	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-6.5190
chr6	125118170	125118274	protein_coding	Ncapd2	utr3	ENSMUSG00000038252	ProperStrand	170	chr17	13112566	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	6	-14.9172
chr1	182733279	182740260	protein_coding	H3f3a	exon	ENSMUSG00000060743	ProperStrand	46	chr16	23110911	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-5.9621
chr2	157119950	157120991	protein_coding	Rpn2	exon	ENSMUSG00000027642	ProperStrand	363	chr7	119253833	119253867	protein_coding	Usp47	utr3	ENSMUSG00000059263	ProperStrand	40	1	-10.5243
chr18	60937530	60938088	protein_coding	Rps14	exon	ENSMUSG00000024608	ProperStrand	154	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-8.5409
chr1	141319671	141319687	protein_coding	Zbtb41	utr5	ENSMUSG00000033964	NonProperStrand	145	chr16	23110526	23110572	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.1141
chr8	3512809	3512829	protein_coding	Mcoln1	exon	ENSMUSG00000004567	ProperStrand	15	chr7	29136525	29136638	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.9384
chr1	192451010	192451100	SINE	B3	B2	chr1B3192451003	NonProperStrand	1	chr1	192450835	192450915	SINE	MIR	MIR	chr1MIR192450698	NonProperStrand	1	1	-inf
chr6	38275294	38275311	protein_coding	Zc3hav1	exon	ENSMUSG00000029826	ProperStrand	20	chr1	89681249	89681349	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-7.6298
chr6	28376147	28376237	protein_coding	Arf5	utr3	ENSMUSG00000020440	ProperStrand	19	chr19	8800355	8800435	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-9.4356
chr19	60902749	60902839	protein_coding	Fam45a	intron	ENSMUSG00000024993	NonProperStrand	2	chr1	82566091	82566171	protein_coding	Col4a4	intron	ENSMUSG00000067158	ProperStrand	12	1	-inf
chr9	55994407	55994901	protein_coding	Tspan3	exon	ENSMUSG00000032324	ProperStrand	10	chr7	52381719	52381798	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-11.2281
chr17	13111029	13112244	protein_coding	Tcp1	exon	ENSMUSG00000068039	ProperStrand	116	chr2	158185554	158185654	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-5.1943
chr7	13516146	13516198	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr2	4544718	4544734	protein_coding	Prpf18	utr3	ENSMUSG00000039449	NonProperStrand	66	1	-8.4755
chr2	158185527	158185571	lincRNA	9430008C03Rik	exon	ENSMUSG00000085385	ProperStrand	1039	chr3	96363102	96363265	protein_coding	Txnip	exon	ENSMUSG00000038393	ProperStrand	172	2	-9.0462
chr6	88435849	88435865	protein_coding	Ruvbl1	exon	ENSMUSG00000030079	NonProperStrand	54	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.9337
chr9	15123934	15123961	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	NonProperStrand	100	chr17	13112511	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	2	-6.1316
chr8	74844898	74844945	protein_coding	Klf2	utr3	ENSMUSG00000055148	ProperStrand	82	chr19	8800454	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-2.9640
chr7	4469944	4470034	protein_coding	Tnni3	utr3	ENSMUSG00000035458	ProperStrand	5	chr11	69481393	69481473	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-8.1843
chr4	131399490	131399506	protein_coding	Mecr	exon	ENSMUSG00000028910	NonProperStrand	109	chr1	63225693	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-5.4944
chr8	98269959	98270098	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	chr1	173041632	173041649	tRNA	tRNA710-ValCAC	.	413910	ProperStrand	206	1	-3.2092
chr10	86153783	86167083	protein_coding	Hsp90b1	utr3	ENSMUSG00000020048	ProperStrand	396	chr4	131908689	131908808	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	11	-2.8504
chr18	38148749	38148766	protein_coding	Arap3	exon	ENSMUSG00000024451	NonProperStrand	2	chr8	75091260	75091284	protein_coding	9130011J15Rik	utr3	ENSMUSG00000044600	ProperStrand	9	1	-inf
chr12	92811860	92811903	protein_coding	Gtf2a1	intron	ENSMUSG00000020962	ProperStrand	61	chr12	92811904	92812014	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	7	-19.3666
chr11	120207379	120207397	protein_coding	Actg1	utr3	ENSMUSG00000062825	ProperStrand	178	chr8	73419656	73419776	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-4.0383
chr8	13416896	13416912	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr8	73115861	73115986	protein_coding	Ell	utr3	ENSMUSG00000070002	ProperStrand	32	4	-18.9632
chr16	22436320	22436344	protein_coding	Etv5	exon	ENSMUSG00000013089	ProperStrand	88	chr13	51743567	51743666	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-6.1032
mmu-miR-3963	2	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr1	36413036	36413113	protein_coding	4632411B12Rik	intron	ENSMUSG00000010453	ProperStrand	24	2	-13.1169
chr2	26493442	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr10	81027603	81028056	protein_coding	Aes	exon	ENSMUSG00000054452	ProperStrand	34	1	-7.3247
chr11	97490731	97490811	protein_coding	E130012A19Rik	utr5	ENSMUSG00000043439	ProperStrand	83	chr11	97642952	97643042	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-3.5149
chr5	23151876	23151893	protein_coding	Srpk2	intron	ENSMUSG00000062604	NonProperStrand	38	chr9	15118245	15118321	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-4.3239
chr4	137762046	137762062	protein_coding	Eif4g3	exon	ENSMUSG00000028760	ProperStrand	42	chr11	62416578	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-5.8648
chr5	115939510	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr8	34802390	34802417	snoRNA	ENSMUSG00000088856_SNORA48	.	ENSMUSG00000088856	ProperStrand	236	1	-5.1686
chrX	45661854	45661934	SINE	B1_Mur3	Alu	chrXB1_Mur345661868	NonProperStrand	1	chr5	34073617	34073707	protein_coding-noncoding	Fgfr3	utr5	ENSMUSG00000054252	ProperStrand	1	1	-inf
chr11	68841445	68841476	protein_coding	1500010J02Rik	exon	ENSMUSG00000020898	ProperStrand	38	chr5	122910044	122910109	protein_coding	Atp2a2	exon	ENSMUSG00000029467	ProperStrand	166	3	-21.0525
chr1	154446993	154447093	protein_coding	Rgl1	intron	ENSMUSG00000026482	NonProperStrand	12	chr3	104259345	104259361	protein_coding	Lrig2	utr3	ENSMUSG00000032913	NonProperStrand	1	1	-inf
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr15	101754849	101754865	protein_coding	Krt4	exon	ENSMUSG00000059668	ProperStrand	45	1	-6.4720
chr9	55984356	55984425	protein_coding	Tspan3	utr3	ENSMUSG00000032324	ProperStrand	10	chr6	124774280	124774609	protein_coding	Usp5	exon	ENSMUSG00000038429	ProperStrand	35	1	-18.2018
chr4	134900515	134900536	protein_coding	Srrm1	exon	ENSMUSG00000028809	ProperStrand	142	chr1	72272845	72272935	snRNA	ENSMUSG00000075752_U2	.	ENSMUSG00000075752	ProperStrand	535	3	-16.3246
chr10	127551595	127551662	protein_coding	Baz2a	exon	ENSMUSG00000040054	ProperStrand	274	chr7	56778374	56778397	protein_coding	Nav2	intron	ENSMUSG00000052512	ProperStrand	106	3	-18.7735
chr9	106183979	106183996	protein_coding	Poc1a	intron	ENSMUSG00000023345	ProperStrand	27	chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	1	-12.2333
chr11	121169095	121169195	protein_coding	Foxk2	utr3	ENSMUSG00000039275	ProperStrand	38	chr1	162967516	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.3319
chr16	16323855	16324068	protein_coding	Dnm1l	exon	ENSMUSG00000022789	NonProperStrand	38	chr15	79913288	79913346	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-7.4324
chr19	42266069	42266092	protein_coding	Zfyve27	utr3	ENSMUSG00000018820	ProperStrand	23	chr17	36097663	36097764	protein_coding	Abcf1	exon	ENSMUSG00000038762	ProperStrand	206	1	-12.7817
chr1	20804507	20804778	protein_coding	Mcm3	exon	ENSMUSG00000041859	ProperStrand	142	chr9	120038498	120038580	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.6088
chr9	66349197	66349228	protein_coding	Herc1	exon	ENSMUSG00000038664	ProperStrand	81	chr5	34234244	34234262	protein_coding	Whsc1	utr5	ENSMUSG00000057406	ProperStrand	409	1	-8.8676
chr9	67777315	67777336	protein_coding	Vps13c	exon	ENSMUSG00000035284	ProperStrand	69	chr16	23110852	23110960	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-1.1561
chr11	45721614	45721704	protein_coding-noncoding	Clint1	utr5	ENSMUSG00000006169	ProperStrand	1	chr11	45719961	45721466	protein_coding	Clint1	exon	ENSMUSG00000006169	ProperStrand	19	1	-inf
chrX	133770966	133771046	SINE	B3	B2	chrXB3133770922	NonProperStrand	1	chrX	133771061	133771151	SINE	B4	B4	chrXB4133771084	NonProperStrand	1	1	-inf
chr16	18240811	18240844	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	chr8	32260338	32260426	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-1.0902
chr19	56003755	56003771	protein_coding	Tcf7l2	intron	ENSMUSG00000024985	ProperStrand	103	chr12	110874223	110874290	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	1	-8.8946
chr6	122678748	122678772	protein_coding	Slc2a3	utr3	ENSMUSG00000003153	ProperStrand	682	chr12	86095543	86095643	protein_coding	Npc2	utr3	ENSMUSG00000021242	ProperStrand	29	1	-9.9162
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr8	35198739	35198803	protein_coding	Leprotl1	utr3	ENSMUSG00000031513	ProperStrand	7	1	-11.4366
chr17	35972607	35972731	protein_coding	Tubb5	exon	ENSMUSG00000001525	ProperStrand	624	chr4	58916047	58916064	protein_coding	AI314180	intron	ENSMUSG00000050812	ProperStrand	19	1	-10.9559
chr7	62729864	62729954	LINE	L1_Mus1	L1	chr7L1_Mus162729517	NonProperStrand	1	chr7	62729745	62729835	LINE	L1_Mus1	L1	chr7L1_Mus162729517	ProperStrand	1	1	-inf
chr11	62416575	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	chr12	110887828	110887896	snoRNA	ENSMUSG00000084549_SNORD113	.	ENSMUSG00000084549	ProperStrand	196	5	-13.0141
chr15	68074155	68074172	protein_coding	Zfat	intron	ENSMUSG00000022335	ProperStrand	6	chr4	131908809	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.3738
chr9	45198928	45199653	protein_coding	Fxyd6	exon	ENSMUSG00000066705	NonProperStrand	108	chr9	15118518	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	1	-8.1658
chr11	121784091	121784108	protein_coding	Gm12588	intron	ENSMUSG00000062632	ProperStrand	9	chr5	121655098	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-7.5103
chr7	150717298	150717424	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	chr15	79908930	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	6	-1.5452
chr12	37232164	37232254	protein_coding	Ispd	intron	ENSMUSG00000043153	ProperStrand	13	chr6	112432203	112432283	protein_coding	Oxtr	intron	ENSMUSG00000049112	ProperStrand	1	1	-inf
chr5	36814554	36814644	protein_coding	Grpel1	utr3	ENSMUSG00000029198	ProperStrand	20	chr7	116663649	116663729	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-7.5988
chr8	72855646	72855736	protein_coding	Upf1	utr3	ENSMUSG00000058301	NonProperStrand	7	chr17	39985044	39985099	pseudogene	AY036118	.	ENSMUSG00000045999	ProperStrand	57	2	-20.0343
chr18	34476493	34476551	protein_coding	Apc	exon	ENSMUSG00000005871	ProperStrand	64	chr10	7383389	7383405	protein_coding	Pcmt1	utr5	ENSMUSG00000019795	ProperStrand	55	1	-13.3582
chr3	153573527	153573575	snoRNA	ENSMUSG00000064731_Snord45b	.	ENSMUSG00000064731	ProperStrand	205	chr11	97642952	97643052	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	22	-inf
chr2	135491831	135491848	protein_coding	Plcb4	intron	ENSMUSG00000039943	ProperStrand	50	chr19	8963086	8963111	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.5849
chr5	37684486	37684586	protein_coding	Evc	intron	ENSMUSG00000029122	ProperStrand	14	chr16	23111443	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.7143
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chrX	18000696	18000713	protein_coding	4930578C19Rik	exon	ENSMUSG00000037358	NonProperStrand	5	1	-9.5409
chr8	120240642	120240662	protein_coding	Hsd17b2	intron	ENSMUSG00000031844	NonProperStrand	1	chr4	131908709	131908799	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-inf
chr4	140723745	140723761	protein_coding	Fbxo42	exon	ENSMUSG00000028920	ProperStrand	91	chr10	127588398	127613450	protein_coding	Rbms2	exon	ENSMUSG00000040043	ProperStrand	26	1	-14.1711
chr1	72871094	72871150	protein_coding	Igfbp2	utr5	ENSMUSG00000039323	ProperStrand	406	chr16	90853167	90853183	protein_coding	4931408A02Rik	intron	ENSMUSG00000039903	ProperStrand	14	2	-20.0522
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr11	24063489	24063506	antisense	4930538E20Rik	.	ENSMUSG00000085516	ProperStrand	6	1	-13.4726
chr2	25915656	25915672	protein_coding	Nacc2	exon	ENSMUSG00000026932	ProperStrand	98	chr5	74489620	74489644	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-2.8859
chr11	69730275	69730327	protein_coding	Eif5a	utr3	ENSMUSG00000078812	ProperStrand	164	chr11	6428035	6428089	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.5222
chr11	52197368	52202276	protein_coding	Vdac1	exon	ENSMUSG00000020402	ProperStrand	107	chr2	26494708	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	4	-7.9218
chr8	125021796	125021887	protein_coding	Fam38a	exon	ENSMUSG00000014444	ProperStrand	132	chr18	35716832	35716884	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.0106
chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr1	62686775	62686791	protein_coding	Pard3b	utr3	ENSMUSG00000046526	ProperStrand	31	1	-7.7724
chr7	129133218	129133940	protein_coding	Gga2	exon	ENSMUSG00000030872	ProperStrand	65	chr11	6302629	6302689	protein_coding	Zmiz2	intron	ENSMUSG00000041164	ProperStrand	69	1	-12.8721
chr5	89663839	89663855	protein_coding	Slc4a4	exon	ENSMUSG00000060961	NonProperStrand	195	chr11	106362557	106362639	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-5.0885
chr9	65044377	65044467	snRNA	ENSMUSG00000075763_U5	.	ENSMUSG00000075763	ProperStrand	216	chr11	97642952	97643042	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	6	-6.2111
chr11	62416571	62416627	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr14	31827477	31827530	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-2.8194
chr11	30014760	30014819	protein_coding	Spnb2	exon	ENSMUSG00000020315	ProperStrand	103	chr7	108971290	108971306	protein_coding	Inppl1	utr3	ENSMUSG00000032737	ProperStrand	272	1	-9.1997
chr19	6058316	6058518	protein_coding	Fau	exon	ENSMUSG00000038274	ProperStrand	64	chr7	148634798	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-3.8650
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr16	38158095	38158226	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	6	-inf
chr18	36754580	36754598	protein_coding	Ankhd1	utr5	ENSMUSG00000024483	NonProperStrand	11	chr7	19661662	19661680	protein_coding	Dmwd	exon	ENSMUSG00000030410	ProperStrand	41	1	-17.6474
chr10	79756718	79756808	protein_coding	Rps15	exon	ENSMUSG00000063457	NonProperStrand	2	chr9	120039534	120039624	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	NonProperStrand	24	1	-inf
chr8	125626310	125626573	protein_coding	Rpl13	utr5	ENSMUSG00000000740	ProperStrand	231	chr6	71832579	71832679	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-3.0680
chr16	87494010	87494027	protein_coding	Cct8	exon	ENSMUSG00000025613	NonProperStrand	3	chr8	113362431	113362489	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	1	-15.6344
chr10	128014040	128014057	protein_coding	Erbb3	exon	ENSMUSG00000018166	NonProperStrand	12	chr4	131908380	131908414	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.2270
chr9	101003411	101003489	protein_coding	Msl2	exon	ENSMUSG00000066415	ProperStrand	9	chr4	131908251	131908341	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.8019
chr12	99916782	99916811	protein_coding	Ptpn21	exon	ENSMUSG00000021009	ProperStrand	5	chr9	15119634	15119724	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-12.4515
chr17	23952104	23952209	protein_coding	Srrm2	exon	ENSMUSG00000039218	ProperStrand	521	chr15	5068440	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	2	-3.7292
chr7	134116195	134116214	lincRNA	D830044I16Rik	exon	ENSMUSG00000087483	NonProperStrand	1	chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	1	-inf
chrX	20236355	20236371	protein_coding-noncoding	Uba1	utr5	ENSMUSG00000001924	ProperStrand	1	chr5	115939520	115939584	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-inf
chr11	100333424	100333514	protein_coding	Klhl11	intron	ENSMUSG00000048732	ProperStrand	8	chr15	34370567	34370647	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-7.5453
chr11	26110149	26110167	protein_coding	5730522E02Rik	intron	ENSMUSG00000032985	NonProperStrand	20	chr2	127285075	127285724	protein_coding	Kcnip3	exon	ENSMUSG00000079056	ProperStrand	14	1	-19.5947
chr4	138962484	138978373	protein_coding	Ubr4	exon	ENSMUSG00000066036	ProperStrand	304	chr9	120038468	120038590	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-1.3459
chrX	160471063	160471083	LTR	ORR1D1	MaLR	chrXORR1D1160470965	ProperStrand	3	chrX	34622906	34623010	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-15.6680
chr1	177632921	177632940	protein_coding	Wdr64	intron	ENSMUSG00000026523	NonProperStrand	3	chr4	131908821	131908870	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-6.9471
chr10	76518452	76518543	protein_coding	Col18a1	exon	ENSMUSG00000001435	ProperStrand	287	chr2	130101988	130102068	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-2.4620
chr9	87398387	87398477	LINE	L1MC1	L1	chr9L1MC187398384	NonProperStrand	1	chr9	87398646	87398726	LINE	L1MC1	L1	chr9L1MC187398595	NonProperStrand	1	1	-inf
chr17	35822057	35822256	protein_coding	Ddr1	exon	ENSMUSG00000003534	ProperStrand	129	chr2	180748144	180748586	protein_coding	Col20a1	exon	ENSMUSG00000016356	ProperStrand	17	1	-14.3387
chr19	8798740	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	chr5	108336363	108336495	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	14	-2.8440
chr6	99576752	99576827	protein_coding	Eif4e3	utr3	ENSMUSG00000030068	ProperStrand	12	chr17	35088957	35089015	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-9.1155
chr11	94157261	94157341	protein_coding	Luc7l3	exon	ENSMUSG00000020863	ProperStrand	38	chr19	60842702	60842792	protein_coding	Eif3a	exon	ENSMUSG00000024991	ProperStrand	287	5	-inf
chr11	68067261	68067277	protein_coding	Ntn1	intron	ENSMUSG00000020902	NonProperStrand	194	chr6	115757992	115758081	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-3.2529
chr16	23109301	23110105	protein_coding	Eif4a2	exon	ENSMUSG00000022884	ProperStrand	356	chr2	17963330	17963347	protein_coding	2810030E01Rik	intron	ENSMUSG00000054074	ProperStrand	15	1	-12.5662
chr6	148303252	148303359	protein_coding	Rps4y2	exon	ENSMUSG00000063171	ProperStrand	47	chr17	35087894	35087944	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-5.6775
mmu-miR-2137	0	21	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	chr4	146135829	146135857	protein_coding	Zfp600	intron	ENSMUSG00000066007	ProperStrand	2	1	-19.1208
chr6	23310973	23310990	protein_coding	Cadps2	intron	ENSMUSG00000017978	ProperStrand	9	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-9.0335
chr10	105817833	105817852	DNA	MER106B	MER1_type	chr10MER106B105817810	NonProperStrand	1	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-inf
chr7	38883598	38884027	protein_coding	Ccne1	exon	ENSMUSG00000002068	ProperStrand	14	chr17	24615989	24616006	protein_coding	Mlst8	utr5	ENSMUSG00000024142	NonProperStrand	40	1	-17.1956
chr1	194204192	194204211	protein_coding	Kcnh1	intron	ENSMUSG00000058248	NonProperStrand	9	chr16	23110962	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.9939
chr15	98478941	98479010	protein_coding	Ddx23	exon	ENSMUSG00000003360	ProperStrand	63	chr2	37255577	37255616	snoRNA	ENSMUSG00000077756_Snord90	.	ENSMUSG00000077756	ProperStrand	167	3	-inf
chr11	83579615	83580628	protein_coding	Heatr6	exon	ENSMUSG00000000976	ProperStrand	67	chr9	120038623	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.8429
chr9	100966289	100966307	SINE	B4A	B4	chr9B4A100966214	ProperStrand	51	chr16	44160207	44160234	protein_coding	Naa50	utr3	ENSMUSG00000022698	ProperStrand	56	1	-13.7804
chr7	148578070	148578211	protein_coding	Taldo1	utr5	ENSMUSG00000025503	ProperStrand	28	chr1	154435137	154435155	protein_coding	Rgl1	intron	ENSMUSG00000026482	NonProperStrand	12	1	-18.0050
chr5	125514388	125514769	protein_coding	Ncor2	exon	ENSMUSG00000029478	ProperStrand	377	chr9	15119288	15119368	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-1.8096
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr3	40755217	40755233	protein_coding	Larp1b	intron	ENSMUSG00000037814	ProperStrand	29	1	-5.8800
chr8	114243883	114243973	protein_coding	Bcar1	intron	ENSMUSG00000031955	ProperStrand	44	chr7	4088681	4088753	protein_coding	Leng8	utr5	ENSMUSG00000035545	ProperStrand	49	14	-inf
chr2	25078020	25078100	protein_coding	Tubb4b	exon	ENSMUSG00000036752	ProperStrand	58	chr11	97642952	97643042	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.5298
chr9	40610069	40610096	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr13	49779746	49779803	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	3	-5.8424
chr17	23806532	23806902	protein_coding	Thoc6	exon	ENSMUSG00000041319	ProperStrand	16	chr7	148634776	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-6.5767
chr1	36838103	36838206	protein_coding	Zap70	exon	ENSMUSG00000026117	ProperStrand	5	chr3	51336468	51336487	protein_coding	Setd7	intron	ENSMUSG00000037111	ProperStrand	4	1	-20.9004
chr19	29678580	29678596	protein_coding	C030046E11Rik	exon	ENSMUSG00000038658	ProperStrand	104	chr2	26494784	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.1578
chr17	75911832	75911850	protein_coding	Rasgrp3	intron	ENSMUSG00000071042	NonProperStrand	1	chr14	33005095	33005138	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-inf
chr1	9882988	9883038	protein_coding	Sgk3	intron	ENSMUSG00000025915	ProperStrand	6	chr19	8963086	8963137	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-6.7266
chr2	18128582	18128618	protein_coding	Mllt10	exon	ENSMUSG00000026743	ProperStrand	30	chr5	118376503	118376519	protein_coding	Nos1	exon	ENSMUSG00000029361	NonProperStrand	237	1	-11.9597
chr17	51282723	51318501	protein_coding	Tbc1d5	utr5	ENSMUSG00000023923	ProperStrand	16	chr18	35716757	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.5854
chr7	3656250	3656312	protein_coding	Rps9	exon	ENSMUSG00000006333	ProperStrand	87	chr8	32260372	32260423	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-3.9253
chr17	64260870	64270974	protein_coding	Fer	exon	ENSMUSG00000000127	ProperStrand	10	chr19	8798740	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	4	-20.2208
chr4	116955390	116955475	protein_coding	Rnf220	intron	ENSMUSG00000028677	ProperStrand	131	chr19	29690320	29691088	protein_coding	Ermp1	exon	ENSMUSG00000046324	ProperStrand	103	1	-10.6600
chr12	85491842	85491882	protein_coding	C130039O16Rik	utr3	ENSMUSG00000042507	ProperStrand	75	chr9	120039540	120039630	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.9174
chr11	116535502	116535531	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr17	56426036	56427224	protein_coding	Plin3	exon	ENSMUSG00000024197	ProperStrand	23	1	-7.8249
chr9	120038610	120040220	protein_coding	Rpsa	intron	ENSMUSG00000032518	ProperStrand	398	chr4	131865855	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	5	-0.9870
mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr2	93882039	93882055	protein_coding	Hsd17b12	intron	ENSMUSG00000027195	NonProperStrand	3	1	-12.2357
chr7	52099645	52099667	protein_coding	Tbc1d17	exon	ENSMUSG00000038520	ProperStrand	20	chr10	23505150	23505268	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.0137
mmu-miR-6238	1	19	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr19	10116351	10116367	protein_coding	Fads3	exon	ENSMUSG00000024664	NonProperStrand	16	1	-13.2208
chr12	81360978	81361041	protein_coding	Actn1	exon	ENSMUSG00000015143	ProperStrand	128	chr8	108653573	108653673	protein_coding	Nfatc3	utr3	ENSMUSG00000031902	ProperStrand	75	3	-inf
chr11	69870769	69870785	protein_coding	Asgr1	exon	ENSMUSG00000020884	NonProperStrand	145	chr19	8963129	8963181	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-0.9731
chr6	72534173	72534191	protein_coding	Elmod3	intron	ENSMUSG00000056698	ProperStrand	2	chr7	4691730	4691749	protein_coding	Suv420h2	utr5	ENSMUSG00000059851	NonProperStrand	70	1	-inf
chr8	90304218	90304308	protein_coding	Zfp423	exon	ENSMUSG00000045333	ProperStrand	33	chr7	29136569	29136649	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.4248
chrX	49409919	49409976	protein_coding	Gpc4	exon	ENSMUSG00000031119	ProperStrand	8	chrX	34899453	34899470	protein_coding	Rhox4c	exon	ENSMUSG00000079635	NonProperStrand	2	1	-26.0014
chr13	56205670	56205697	protein_coding	H2afy	exon	ENSMUSG00000015937	ProperStrand	103	chr7	144594156	144594172	protein_coding	9430038I01Rik	intron	ENSMUSG00000040139	ProperStrand	4	1	-17.8669
chr10	52024625	52024644	protein_coding	Dcbld1	intron	ENSMUSG00000019891	ProperStrand	21	chr11	69481387	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	4	-16.3081
chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	chr14	52627125	52627170	protein_coding	Zfp219	exon	ENSMUSG00000049295	ProperStrand	27	1	-10.8872
chr4	117317930	117317963	protein_coding	Eri3	intron	ENSMUSG00000033423	ProperStrand	246	chr8	129468746	129468846	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-1.9090
chr18	42386889	42387689	protein_coding	Lars	exon	ENSMUSG00000024493	ProperStrand	69	chr16	23109042	23109091	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-7.0038
chr1	95303855	95303945	protein_coding	Hdlbp	utr3	ENSMUSG00000034088	ProperStrand	97	chr10	107800749	107800829	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	1	-7.1138
chr2	121949511	121949527	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	chr17	35088957	35089007	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-3.0247
chr2	29787044	29787124	protein_coding	Odf2	utr3	ENSMUSG00000026790	ProperStrand	58	chr1	162967516	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-3.5368
chr15	79908928	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	chr13	90238614	90238704	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	1	-1.3567
chr12	112919245	112919345	protein_coding	Trmt61a	intron	ENSMUSG00000060950	ProperStrand	23	chr4	131908236	131908287	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.9964
chr10	16844327	16844346	LINE	L1_Mur1	L1	chr10L1_Mur116843303	ProperStrand	76	chr9	120038552	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.6228
chr9	21542391	21542435	protein_coding	Ldlr	exon	ENSMUSG00000032193	ProperStrand	60	chr11	69481381	69481471	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.2006
chr19	10290952	10290977	protein_coding	Gm98	exon	ENSMUSG00000036098	ProperStrand	26	chr1	173200741	173200759	protein_coding	B4galt3	utr5	ENSMUSG00000052423	ProperStrand	14	1	-18.0942
chr6	107738191	107738208	Other	RMER1B	Other	chr6RMER1B107738112	ProperStrand	29	chr3	108357449	108357498	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-5.9595
chr5	135853112	135853153	protein_coding	Pom121	utr3	ENSMUSG00000053293	ProperStrand	127	chr7	116664794	116664884	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.3636
chr11	69457416	69462366	protein_coding	Fxr2	exon	ENSMUSG00000018765	ProperStrand	40	chr14	76247787	76247842	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-4.9502
chrX	35474871	35474930	protein_coding	Rhox13	exon	ENSMUSG00000050197	ProperStrand	2	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	2	-inf
chr9	99483993	99484009	protein_coding	Dbr1	exon	ENSMUSG00000032469	ProperStrand	162	chr3	123210865	123210905	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-0.6999
chr4	135327523	135329683	protein_coding	Myom3	exon	ENSMUSG00000037139	NonProperStrand	62	chr9	120038467	120038552	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.9804
chr8	41570003	41570019	protein_coding	Zdhhc2	utr3	ENSMUSG00000039470	NonProperStrand	85	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.2579
chr19	44188452	44188492	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr15	79129582	79129598	protein_coding	Pla2g6	exon	ENSMUSG00000042632	ProperStrand	32	1	-9.0583
chr8	13019573	13019602	protein_coding	Mcf2l	utr3	ENSMUSG00000031442	ProperStrand	14	chr1	72272829	72272919	snRNA	ENSMUSG00000075752_U2	.	ENSMUSG00000075752	ProperStrand	535	2	-19.7237
chr16	91657099	91657189	protein_coding	Son	exon	ENSMUSG00000022961	ProperStrand	59	chr11	97643002	97643082	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.5004
chr11	43525737	43525807	protein_coding	Pwwp2a	intron	ENSMUSG00000044950	ProperStrand	22	chr16	23111472	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.8747
chr9	120039578	120039678	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	chr13	22023036	22023097	tRNA	tRNA983-MetCAT	.	1024188	ProperStrand	32	1	-4.4995
chr10	75945394	75945436	protein_coding	Mcm3ap	exon	ENSMUSG00000001150	ProperStrand	95	chr2	94277707	94277726	protein_coding	Api5	intron	ENSMUSG00000027193	NonProperStrand	2	1	-inf
chr3	116959017	116959107	LTR	MT2A	ERVL	chr3MT2A116959031	ProperStrand	1	chr3	116959185	116959265	LTR	MT2A	ERVL	chr3MT2A116959129	ProperStrand	1	1	-inf
chr17	30772308	30772324	protein_coding	Dnahc8	utr5	ENSMUSG00000033826	ProperStrand	246	chr5	108336376	108336430	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-2.3066
chr11	3410169	3410201	SINE	PB1D10	Alu	chr11PB1D103410128	NonProperStrand	2	chr16	23111777	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-inf
chr7	30106583	30106654	protein_coding	Sipa1l3	utr3	ENSMUSG00000030583	ProperStrand	559	chrX	56358179	56358196	protein_coding	Fgf13	intron	ENSMUSG00000031137	ProperStrand	39	1	-9.7134
chr5	65952377	65952395	protein_coding	Ube2k	intron	ENSMUSG00000029203	ProperStrand	289	chr1	36619591	36619679	protein_coding	Fam178b	utr3	ENSMUSG00000046337	ProperStrand	5	1	-15.3121
chr2	90235285	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	82723543	82723559	protein_coding	Irak1bp1	utr5	ENSMUSG00000032251	NonProperStrand	16	2	-11.4559
chr11	120133559	120133659	protein_coding	Bahcc1	exon	ENSMUSG00000039741	ProperStrand	118	chr10	23505189	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-1.8214
chr17	71243695	71243712	lincRNA	Gm16724	intron	ENSMUSG00000085916	ProperStrand	13	chr10	81028097	81028256	protein_coding	Aes	exon	ENSMUSG00000054452	ProperStrand	34	1	-17.3582
chr6	94776857	94776877	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	chr11	69483136	69483262	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	6	-2.1983
chr5	115254723	115254802	protein_coding	Ankrd13a	utr3	ENSMUSG00000041870	ProperStrand	22	chr5	130300458	130300548	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.3511
chr8	109193440	109193540	protein_coding	Cdh1	utr3	ENSMUSG00000000303	ProperStrand	283	chr5	147646801	147646848	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	1	-4.9091
chr5	69946506	69946596	LTR	MTD	MaLR	chr5MTD69946493	ProperStrand	1	chr5	69946264	69946354	LTR	ORR1A4	MaLR	chr5ORR1A469946128	ProperStrand	1	1	-inf
chr10	62105610	62105650	protein_coding	Ddx50	exon	ENSMUSG00000020076	ProperStrand	3	chr17	24857796	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-8.3442
chr17	33074026	33074126	protein_coding	Cyp4f13	intron	ENSMUSG00000024055	ProperStrand	4	chr16	23110931	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.6489
chr11	101466254	101466352	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	chr11	6428040	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	16	-18.0238
chr11	77347607	77347623	protein_coding	Taok1	utr3	ENSMUSG00000017291	ProperStrand	41	chr12	60141323	60141413	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-7.5887
chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	chr7	117189863	117189885	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-3.3181
chr12	21506685	21506765	SINE	B2_Mm1t	B2	chr12B2_Mm1t21506664	NonProperStrand	1	chr2	124206960	124207050	protein_coding	Sema6d	intron	ENSMUSG00000027200	ProperStrand	5	1	-inf
chr3	40820886	40820976	LINE	L1MEf	L1	chr3L1MEf40820707	NonProperStrand	1	chr4	131865857	131865937	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr3	144816290	144816342	protein_coding	Odf2l	intron	ENSMUSG00000028256	ProperStrand	10	chr15	103071947	103072016	protein_coding	Hnrnpa1	exon	ENSMUSG00000046434	ProperStrand	68	1	-16.6891
chr4	41673405	41673421	protein_coding	Il11ra1	intron	ENSMUSG00000073889	ProperStrand	128	chr3	123210895	123210976	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-0.9701
chr4	131908689	131908896	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	chr4	132394364	132394462	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	10	-1.3563
chr17	38134537	38134627	LINE	Lx6	L1	chr17Lx638134280	NonProperStrand	2	chr2	128956181	128956228	protein_coding	Chchd5	exon	ENSMUSG00000037938	ProperStrand	4	1	-inf
chr10	62268270	62268291	protein_coding	Tet1	utr3	ENSMUSG00000047146	ProperStrand	286	chr7	118219574	118219638	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	4	-6.0927
chr17	81832053	81832070	protein_coding	Slc8a1	exon	ENSMUSG00000054640	ProperStrand	9	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-11.6174
chr4	142769211	142769233	protein_coding	Prdm2	exon	ENSMUSG00000057637	ProperStrand	46	chr10	90581105	90581195	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	8	-inf
chr19	5797609	5797642	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr5	136108754	136108770	protein_coding	Rhbdd2	exon	ENSMUSG00000039917	ProperStrand	6	1	-12.2958
chr2	90235289	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	9	-10.9737
chr2	33110557	33110637	protein_coding	Ralgps1	intron	ENSMUSG00000038831	ProperStrand	75	chr11	115147046	115147136	protein_coding	Fads6	intron	ENSMUSG00000044788	ProperStrand	2	1	-inf
chr5	129108591	129108691	protein_coding	Fzd10	exon	ENSMUSG00000081683	ProperStrand	5	chr18	75161530	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-12.3542
chr9	15123929	15123960	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	NonProperStrand	100	chr15	98350146	98350259	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-3.7925
chr7	52147244	52147611	protein_coding	Med25	utr5	ENSMUSG00000002968	ProperStrand	33	chr5	92485085	92485165	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	1	-9.9434
chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	chr2	143777960	143777991	protein_coding	Rrbp1	exon	ENSMUSG00000027422	ProperStrand	76	1	-8.0315
chr13	23392049	23392066	lincRNA	4930557F10Rik	intron	ENSMUSG00000085488	NonProperStrand	51	chr7	30231467	30231593	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	1	-9.1730
chr17	46915019	46915092	protein_coding	Rpl7l1	exon	ENSMUSG00000063888	ProperStrand	37	chr17	35089182	35089254	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	4	-18.4026
chr8	80571661	80571692	LTR	RMER10A	ERVL	chr8RMER10A80571481	NonProperStrand	2	chr16	23110828	23110872	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-inf
chr9	30235085	30235102	protein_coding	Snx19	exon	ENSMUSG00000031993	ProperStrand	353	chr11	102775703	102775915	protein_coding	Kif18b	exon	ENSMUSG00000051378	ProperStrand	43	1	-10.4342
chr17	29173284	29178333	protein_coding	Srsf3	exon	ENSMUSG00000071172	ProperStrand	23	chr16	23111374	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-10.0533
chr10	79323583	79323645	protein_coding	Ptbp1	exon	ENSMUSG00000006498	ProperStrand	129	chr9	103950068	103950086	protein_coding	Uba5	intron	ENSMUSG00000032557	ProperStrand	111	1	-10.5409
chr18	75161136	75161172	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	chr7	52382758	52382832	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	3	-6.9691
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr7	116664812	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-1.9901
chr11	87895517	87895548	protein_coding	Vezf1	utr3	ENSMUSG00000018377	ProperStrand	3	chr17	34324656	34324673	protein_coding	Psmb9	utr5	ENSMUSG00000024337	ProperStrand	60	1	-21.0062
chr10	86168057	86168130	protein_coding	Hsp90b1	utr5	ENSMUSG00000020048	ProperStrand	396	chr11	6428034	6428124	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-1.8122
chr8	87366472	87366572	protein_coding	Calr	utr3	ENSMUSG00000003814	ProperStrand	232	chr2	26768368	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-3.0517
chr1	33681778	33681868	protein_coding	Prim2	intron	ENSMUSG00000026134	ProperStrand	42	chr5	36253382	36253462	protein_coding	Afap1	intron	ENSMUSG00000029094	ProperStrand	11	1	-17.4626
chr5	130924898	130924915	protein_coding	Caln1	utr5	ENSMUSG00000060371	ProperStrand	32	chr11	6428103	6428154	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.3666
chr6	83719033	83719069	protein_coding	Tex261	utr3	ENSMUSG00000014748	ProperStrand	13	chr19	8963031	8963080	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.1201
chr8	98257176	98257931	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	chr15	82725598	82725637	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	1	-5.2492
chr7	149563029	149563281	protein_coding	Ctsd	exon	ENSMUSG00000007891	ProperStrand	60	chr9	120039546	120039626	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.3187
chr1	33785432	33785453	protein_coding	Rab23	intron	ENSMUSG00000004768	ProperStrand	7	chr2	18508668	18508718	tRNA	tRNA1947-AsnGTT	.	1740406	ProperStrand	179	1	-15.5238
chr6	94561678	94563613	protein_coding	Lrig1	exon	ENSMUSG00000030029	ProperStrand	26	chr19	8963022	8963122	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.7706
chr10	16844327	16844346	LINE	L1_Mur1	L1	chr10L1_Mur116843303	ProperStrand	76	chr4	141659815	141659890	protein_coding	Kazn	utr3	ENSMUSG00000040606	ProperStrand	123	2	-17.9837
chr1	67055803	67055905	protein_coding	Lancl1	exon	ENSMUSG00000026000	ProperStrand	8	chr7	112533562	112533579	protein_coding	Fam160a2	exon	ENSMUSG00000044465	ProperStrand	85	3	-19.4047
chr13	22098354	22098371	protein_coding	Prss16	intron	ENSMUSG00000006179	ProperStrand	78	chr15	79913298	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-3.1138
chr11	58809803	58810353	protein_coding	Obscn	exon	ENSMUSG00000061462	ProperStrand	81	chr2	38859670	38859688	protein_coding	Rpl35	exon	ENSMUSG00000062997	ProperStrand	68	1	-12.4580
chr16	23111686	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	chr14	52829458	52829567	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	14	-3.3744
chr17	75690723	75690739	protein_coding	Ltbp1	exon	ENSMUSG00000001870	ProperStrand	136	chr14	52716241	52716288	protein_coding	Hnrnpc	intron	ENSMUSG00000060373	ProperStrand	75	1	-11.2217
chr15	35830230	35830249	protein_coding	Vps13b	intron	ENSMUSG00000037646	ProperStrand	56	chr7	29136525	29136573	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.4821
chr11	48613944	48614044	protein_coding	Gnb2l1	utr5	ENSMUSG00000020372	ProperStrand	347	chr14	57919826	57919844	protein_coding	Cryl1	intron	ENSMUSG00000021947	ProperStrand	9	1	-13.6865
chr7	54110642	54110732	protein_coding	Ldha	utr3	ENSMUSG00000063229	ProperStrand	280	chr19	9051811	9051880	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	1	-6.4009
chr5	121656677	121656777	protein_coding	Rpl6	exon	ENSMUSG00000029614	ProperStrand	332	chr1	162966001	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-0.8844
chr11	4074175	4080791	protein_coding	Sf3a1	exon	ENSMUSG00000002129	ProperStrand	78	chr4	131908236	131908438	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	9	-14.6730
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr5	8837585	8837603	protein_coding	Abcb1b	exon	ENSMUSG00000028970	ProperStrand	7	1	-10.2930
chr5	135146245	135146335	protein_coding	Limk1	exon	ENSMUSG00000029674	ProperStrand	10	chr15	79908939	79908984	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-9.0919
chr2	13142253	13142333	protein_coding	Rsu1	intron	ENSMUSG00000026727	NonProperStrand	6	chr2	12892439	12892531	protein_coding	Pter	intron	ENSMUSG00000026730	ProperStrand	2	1	-inf
chr4	149618396	149619227	protein_coding	Eno1	exon	ENSMUSG00000063524	ProperStrand	432	chr4	122968666	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-2.5727
chr1	169291672	169291984	protein_coding	Aldh9a1	exon	ENSMUSG00000026687	ProperStrand	58	chr2	130103454	130103500	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	8	-inf
chr1	129676631	129700299	protein_coding	Ccnt2	utr3	ENSMUSG00000026349	ProperStrand	34	chr4	131908688	131908807	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-10.4228
chr5	102190091	102190218	LINE	Lx9	L1	chr5Lx9102189012	ProperStrand	9	chr16	84731131	84731150	protein_coding	Mrpl39	exon	ENSMUSG00000022889	ProperStrand	32	9	-inf
chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	NonProperStrand	91	chr19	8963087	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	6	-inf
chr17	35188647	35188669	protein_coding	Clic1	intron	ENSMUSG00000007041	NonProperStrand	4	chr9	15119714	15119762	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-8.0470
mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr5	149100499	149100516	protein_coding	Mtus2	exon	ENSMUSG00000029651	ProperStrand	114	1	-4.6573
chr13	53462744	53463292	protein_coding	Sptlc1	exon	ENSMUSG00000021468	ProperStrand	33	chr17	35990445	35990463	protein_coding	Mdc1	exon	ENSMUSG00000061607	NonProperStrand	11	2	-18.7171
chr11	93718383	93718404	DNA	RCHARR1	MER1_type	chr11RCHARR193718161	NonProperStrand	1	chr7	118219692	118219740	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-inf
chr10	43723884	43723902	protein_coding	Aim1	utr5	ENSMUSG00000019866	ProperStrand	19	chr4	131399490	131399506	protein_coding	Mecr	exon	ENSMUSG00000028910	NonProperStrand	109	1	-14.4447
chr2	180422159	180422275	protein_coding	Dido1	intron	ENSMUSG00000038914	ProperStrand	81	chr16	23110543	23110584	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.9653
chr5	12383278	12383295	protein_coding	Sema3d	utr5	ENSMUSG00000040254	ProperStrand	5	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-10.3095
chr13	90238621	90238721	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	chr3	123210852	123210952	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	8	-1.6621
chr2	30751605	30751623	protein_coding	Ptges	intron	ENSMUSG00000050737	NonProperStrand	10	chr9	15118323	15118343	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-6.9876
chr4	148534214	148535010	protein_coding	Pgd	exon	ENSMUSG00000028961	ProperStrand	34	chr19	8963090	8963170	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.2720
chr11	116535914	116535982	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr7	67123729	67123759	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	1	-2.4036
chr9	99483993	99484009	protein_coding	Dbr1	exon	ENSMUSG00000032469	ProperStrand	162	chr19	8799581	8799644	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-4.8248
chr2	90235315	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	74022294	74030741	protein_coding	Plvap	utr3	ENSMUSG00000034845	ProperStrand	27	1	-6.0220
chrX	39459373	39459389	protein_coding	Xiap	utr3	ENSMUSG00000025860	ProperStrand	14	chr18	35714144	35714258	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-6.2700
chr17	4082162	4082242	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr6	77567155	77567247	protein_coding	Ctnna2	intron	ENSMUSG00000063063	NonProperStrand	9	1	-13.8549
chrX	84483696	84483759	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr17	24857717	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	12	-3.8986
chr7	139010049	139010065	protein_coding	Fgfr2	intron	ENSMUSG00000030849	NonProperStrand	95	chr9	15119711	15119735	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.8678
chrX	140781274	140782533	protein_coding-noncoding	Alg13	utr3	ENSMUSG00000041718	ProperStrand	87	chr8	73419682	73419782	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.4781
chr13	9833560	9833659	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr8	77554213	77554249	protein_coding	Hmgxb4	utr3	ENSMUSG00000034518	ProperStrand	25	1	-6.6812
chr13	113342172	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	chr1	63225589	63225676	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	4	-8.6637
chr2	179788948	179789031	protein_coding	Ss18l1	intron	ENSMUSG00000039086	ProperStrand	18	chr18	35716707	35716797	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.3552
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr2	158182202	158182291	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-0.9980
chr11	96902910	96902971	protein_coding	Mrpl10	utr5	ENSMUSG00000001445	ProperStrand	43	chr9	120038564	120038612	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.6477
chr11	49899258	49899310	protein_coding	Rnf130	exon	ENSMUSG00000020376	ProperStrand	5	chr8	98002997	98003097	protein_coding	Csnk2a2	intron	ENSMUSG00000046707	ProperStrand	21	3	-19.1752
chr10	31328217	31328236	protein_coding	Rnf217	exon	ENSMUSG00000063760	ProperStrand	33	chr18	75161108	75161173	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	1	-10.2264
chr16	32467304	32470234	protein_coding	Pcyt1a	exon	ENSMUSG00000005615	ProperStrand	7	chr9	120038642	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-7.2707
chr11	48615821	48615868	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	chr3	113827103	113827119	protein_coding	Col11a1	utr3	ENSMUSG00000027966	NonProperStrand	139	1	-8.1167
chr11	70340164	70340715	protein_coding	Psmb6	exon	ENSMUSG00000018286	ProperStrand	11	chr10	23505152	23505258	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-14.0726
chr2	84884579	84885630	protein_coding	Ssrp1	exon	ENSMUSG00000027067	ProperStrand	118	chr3	108357307	108357387	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-3.2770
chr11	115470116	115470137	protein_coding	Mif4gd	intron	ENSMUSG00000020743	NonProperStrand	6	chr7	150717303	150717393	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-10.2214
chr11	86519587	86520198	protein_coding	Cltc	exon	ENSMUSG00000047126	ProperStrand	319	chr11	68887039	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	2	-2.4913
chr1	130265009	130285770	protein_coding	Dars	exon	ENSMUSG00000026356	ProperStrand	28	chr11	69483190	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	8	-20.4128
chr3	33963208	33963281	protein_coding	Fxr1	intron	ENSMUSG00000027680	ProperStrand	58	chr7	116663646	116663738	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.5700
chr7	25673362	25673405	protein_coding	Rps19	exon	ENSMUSG00000040952	ProperStrand	101	chr11	69483136	69483188	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.6124
chr8	25920545	25921169	protein_coding	Adam5	exon	ENSMUSG00000031554	ProperStrand	49	chr16	23110526	23110553	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.8132
chr9	15130698	15130793	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	chr6	71832577	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	2	-3.4251
chr3	35801639	35801664	protein_coding	Dcun1d1	intron	ENSMUSG00000027708	ProperStrand	14	chr4	85016349	85016365	protein_coding	Sh3gl2	intron	ENSMUSG00000028488	NonProperStrand	313	1	-12.9671
mmu-miR-6238	1	20	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr3	128995080	128995097	protein_coding	Enpep	intron	ENSMUSG00000028024	NonProperStrand	20	1	-12.7613
chr10	17823960	17824067	protein_coding	Reps1	exon	ENSMUSG00000019854	ProperStrand	60	chr19	8799859	8799897	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-4.9468
chr9	27136087	27136187	protein_coding	Igsf9b	exon	ENSMUSG00000034275	ProperStrand	18	chr9	120038468	120038528	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.3272
chr7	133726521	133726538	protein_coding	Cln3	exon	ENSMUSG00000030720	ProperStrand	87	chr19	29686954	29686970	protein_coding	Ermp1	utr3	ENSMUSG00000046324	NonProperStrand	7	1	-17.0509
chr11	98104878	98106547	protein_coding	Cdk12	exon	ENSMUSG00000003119	ProperStrand	50	chr2	158182180	158182280	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	2	-8.7932
chr11	55268388	55274594	protein_coding	Atox1	exon	ENSMUSG00000018585	ProperStrand	15	chr16	23110857	23110957	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.0842
chr1	88202406	88202484	protein_coding	B3gnt7	exon	ENSMUSG00000079445	ProperStrand	13	chr17	35087894	35087939	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	3	-18.8665
chr8	48588713	48588733	protein_coding	D030016E14Rik	exon	ENSMUSG00000038102	ProperStrand	15	chr2	154702396	154703494	protein_coding	Eif2s2	exon	ENSMUSG00000074656	ProperStrand	96	6	-inf
chr11	3250733	3250772	protein_coding	Limk2	exon	ENSMUSG00000020451	ProperStrand	100	chr4	131865864	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	9	-14.4388
chr2	145738158	145738190	protein_coding	Naa20	exon	ENSMUSG00000002728	ProperStrand	9	chr18	35716836	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-9.5374
chr14	56389353	56390228	protein_coding	Adcy4	exon	ENSMUSG00000022220	ProperStrand	29	chrX	93358749	93358797	protein_coding	Msn	exon	ENSMUSG00000031207	ProperStrand	71	1	-14.4500
chr6	52196491	52196508	lincRNA	Hoxa11as	exon	ENSMUSG00000086427	NonProperStrand	7	chr8	108734898	108734914	protein_coding	Prmt7	utr5	ENSMUSG00000060098	ProperStrand	43	1	-18.6393
chr5	108520182	108520259	protein_coding	Mtf2	intron	ENSMUSG00000029267	ProperStrand	39	chr8	98269959	98270013	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	2	-10.3631
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr6	42543791	42543807	protein_coding	Fam115e	exon	ENSMUSG00000018656	NonProperStrand	64	1	-8.5865
chrX	7478087	7478104	protein_coding	Timm17b	exon	ENSMUSG00000031158	ProperStrand	36	chr4	131908270	131908299	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.2156
chr9	122075466	122075482	protein_coding	Snrk	exon	ENSMUSG00000038145	NonProperStrand	97	chr10	110918547	110918614	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-2.5925
chr17	53790412	53790512	protein_coding	Kat2b	intron	ENSMUSG00000000708	ProperStrand	26	chr16	23110530	23110580	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-6.7253
chr11	70539636	70539686	protein_coding	Kif1c	exon	ENSMUSG00000020821	ProperStrand	26	chr17	35088957	35089015	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	2	-12.1042
chrX	36819137	36819155	LTR	ORR1D2	MaLR	chrXORR1D236819056	ProperStrand	1	chr8	49223026	49223084	protein_coding	Dctd	intron	ENSMUSG00000031562	ProperStrand	10	1	-inf
chr5	30590862	30590897	protein_coding	Ept1	exon	ENSMUSG00000075703	ProperStrand	18	chr4	131908236	131908341	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-8.7744
chr4	106233858	106233898	protein_coding	Dhcr24	exon	ENSMUSG00000034926	ProperStrand	94	chr19	4613221	4613260	protein_coding	Lrfn4	exon	ENSMUSG00000045045	ProperStrand	19	1	-14.7305
chr17	25996060	25996076	protein_coding	Wdr90	exon	ENSMUSG00000073434	ProperStrand	91	chr5	108333572	108333627	snoRNA	ENSMUSG00000064453_Snord21	.	ENSMUSG00000064453	ProperStrand	201	1	-10.0518
chr8	125626932	125626983	snoRNA	ENSMUSG00000064450_Snord68	.	ENSMUSG00000064450	ProperStrand	181	chr9	15118332	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-1.6001
chr11	116535914	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr1	191058375	191058392	protein_coding	Kcnk2	intron	ENSMUSG00000037624	ProperStrand	56	1	-6.0465
chr10	18113290	18113306	protein_coding	Nhsl1	intron	ENSMUSG00000039835	NonProperStrand	12	chr5	108334194	108334260	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-8.0381
chr2	158185577	158185686	lincRNA	9430008C03Rik	exon	ENSMUSG00000085385	ProperStrand	1039	chr14	52829459	52829477	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-2.7366
chr11	77994467	77994723	protein_coding	Rpl23a	exon	ENSMUSG00000058546	ProperStrand	121	chr10	110918655	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-2.2193
chr9	66255883	66255899	protein_coding	Herc1	exon	ENSMUSG00000038664	NonProperStrand	35	chr11	69481362	69481428	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-4.2039
chr2	12741876	12741895	LTR	ORR1A2	MaLR	chr2ORR1A212741777	NonProperStrand	6	chr4	131908811	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.3738
chr3	88786277	88786330	protein_coding	Ash1l	exon	ENSMUSG00000028053	ProperStrand	30	chr4	131908809	131908876	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-4.1042
chr9	104601343	104601360	protein_coding	Cpne4	intron	ENSMUSG00000032564	NonProperStrand	4	chr16	90386836	90386853	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	1	-18.1468
chr4	126559848	126566767	protein_coding	Zmym4	exon	ENSMUSG00000042446	ProperStrand	94	chr2	26494708	26494760	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	3	-6.2139
chr9	123436659	123436749	SINE	B3A	B2	chr9B3A123436659	NonProperStrand	1	chr5	19420426	19420506	protein_coding	Magi2	intron	ENSMUSG00000040003	ProperStrand	49	1	-inf
chr10	6063958	6063977	protein_coding	Akap12	intron	ENSMUSG00000038587	ProperStrand	1008	chr2	32818887	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	2	-1.5266
chr12	33505369	33505400	protein_coding	Nampt	utr5	ENSMUSG00000020572	ProperStrand	15	chr19	8800377	8800467	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-6.2234
chr18	64660240	64660993	protein_coding	Nars	exon	ENSMUSG00000024587	ProperStrand	97	chr1	162965981	162966040	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-2.7383
chr17	90706035	90706052	protein_coding	Nrxn1	intron	ENSMUSG00000024109	NonProperStrand	22	chr8	42089942	42089964	protein_coding	Mtus1	intron	ENSMUSG00000045636	ProperStrand	12	1	-19.2765
chr2	26493383	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	7	-11.0360
chr19	10525980	10525997	protein_coding	Syt7	utr3	ENSMUSG00000024743	NonProperStrand	17	chr8	29758561	29758578	protein_coding	Unc5d	utr3	ENSMUSG00000063626	NonProperStrand	9	1	-19.7748
chr2	116702624	116702643	antisense	Gm13990	.	ENSMUSG00000086462	ProperStrand	2	chr16	11144177	11144277	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	1	-18.1559
chr17	34324656	34324673	protein_coding	Psmb9	utr5	ENSMUSG00000024337	ProperStrand	60	chr2	70927899	70927915	protein_coding	Dcaf17	exon	ENSMUSG00000041966	NonProperStrand	89	1	-12.5220
chr13	23673775	23673837	protein_coding	Hist1h4d	utr3	ENSMUSG00000061482	ProperStrand	57	chr4	122970392	122970483	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	5	-19.6990
mmu-miR-1949	1	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr14	76247711	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	4	-2.2346
chr1	75548233	75548298	protein_coding	Slc4a3	exon	ENSMUSG00000006576	ProperStrand	5	chr11	69481333	69481427	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-8.1843
chr15	12279816	12279906	protein_coding	Golph3	utr3	ENSMUSG00000022200	ProperStrand	35	chr16	23110472	23110552	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.4208
chrX	103395900	103396007	protein_coding	Pgk1	intron	ENSMUSG00000062070	ProperStrand	484	chr7	117189957	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-0.8492
chr11	75546588	75565453	protein_coding	Ywhae	exon	ENSMUSG00000020849	ProperStrand	176	chr17	13112519	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-2.6071
chr19	13379956	13379979	LINE	L1VL4	L1	chr19L1VL413379358	ProperStrand	1	chr4	131865867	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr3	41417061	41417151	protein_coding	Phf17	exon	ENSMUSG00000025764	ProperStrand	101	chr11	97643010	97643090	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-4.6850
chr2	29001529	29001561	protein_coding	Setx	exon	ENSMUSG00000043535	ProperStrand	187	chr7	116664843	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-1.7409
chr9	58732317	58732334	protein_coding	Neo1	exon	ENSMUSG00000032340	NonProperStrand	9	chr2	164732935	164732951	protein_coding	Zfp335	exon	ENSMUSG00000039834	ProperStrand	42	1	-17.6717
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr2	166890799	166890858	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	4	-13.9004
chr17	35239302	35239449	protein_coding	Abhd16a	exon	ENSMUSG00000007036	ProperStrand	2	chr1	155287319	155287354	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	1	-16.4302
chr18	73693166	73693189	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr11	55296208	55296334	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	8	-4.9291
chr12	25347337	25347394	protein_coding	Klf11	utr3	ENSMUSG00000020653	ProperStrand	4	chr9	15118332	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-8.9841
chr18	82725900	82725953	protein_coding	Mbp	utr3	ENSMUSG00000041607	ProperStrand	11	chr7	118219575	118219621	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-7.5402
chr3	89354340	89354357	protein_coding	Kcnn3	intron	ENSMUSG00000000794	NonProperStrand	38	chr5	139705718	139705748	protein_coding	Sun1	exon	ENSMUSG00000036817	ProperStrand	108	1	-13.0547
chr17	51877559	51877575	protein_coding	Satb1	utr3	ENSMUSG00000023927	ProperStrand	62	chr4	131908710	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	6	-8.9718
chr4	154097599	154097615	LINE	L1MEe	L1	chr4L1MEe154097378	ProperStrand	15	chr8	73419657	73419777	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-5.7918
chr13	25003433	25003533	protein_coding	Aldh5a1	exon	ENSMUSG00000035936	ProperStrand	13	chr9	15118322	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-10.5334
chr14	34780568	34780977	protein_coding	Zfp488	utr3	ENSMUSG00000044519	NonProperStrand	39	chr7	54441803	54442494	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	5	-18.7965
chr8	46036335	46036380	protein_coding	Fat1	exon	ENSMUSG00000070047	ProperStrand	306	chr1	192712615	192712631	protein_coding	Rps6kc1	exon	ENSMUSG00000089872	ProperStrand	241	1	-7.2735
chr13	99081995	99082095	protein_coding	Btf3	intron	ENSMUSG00000021660	ProperStrand	64	chr3	85942711	85942775	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	1	-9.5886
chr2	158182201	158182273	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	chr12	92811867	92811902	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	1	-0.9845
chr11	78313939	78313956	protein_coding	Vtn	exon	ENSMUSG00000017344	ProperStrand	188	chr3	108357272	108357346	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-2.4588
chr10	14485208	14485227	protein_coding	Nmbr	intron	ENSMUSG00000019865	ProperStrand	2	chr4	126703409	126703426	protein_coding	Sfpq	exon	ENSMUSG00000028820	ProperStrand	340	1	-17.3932
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr12	88062992	88063012	protein_coding	Angel1	exon	ENSMUSG00000021257	ProperStrand	12	1	-11.9952
chr10	127560255	127560272	protein_coding	Baz2a	exon	ENSMUSG00000040054	ProperStrand	274	chr8	73419657	73419741	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-0.8051
chr1	91358413	91358430	protein_coding	Agap1	intron	ENSMUSG00000055013	ProperStrand	229	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-3.4897
chr2	160721184	160721200	protein_coding	Lpin3	exon	ENSMUSG00000027412	ProperStrand	31	chr18	33954827	33954863	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-4.7567
chr2	84441347	84441419	protein_coding	Ctnnd1	utr3	ENSMUSG00000034101	ProperStrand	26	chr7	29136573	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-9.5750
chr8	73051744	73058867	protein_coding	Fkbp8	utr3	ENSMUSG00000019428	ProperStrand	52	chr16	23110840	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-3.9433
chr6	83144778	83145050	protein_coding	Dctn1	exon	ENSMUSG00000031865	ProperStrand	17	chr10	110918553	110918633	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-5.8838
chr16	5000280	5000360	LTR	MTA_Mm	MaLR	chr16MTA_Mm5000261	ProperStrand	1	chr16	5000094	5000184	LTR	RLTR22_Mur	ERVK	chr16RLTR22_Mur5000000	NonProperStrand	1	1	-inf
chr11	113613108	113613124	protein_coding	Cdc42ep4	utr5	ENSMUSG00000041598	ProperStrand	56	chr9	120038499	120038552	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.1631
chr5	147265779	147283230	protein_coding	Wasf3	utr3	ENSMUSG00000029636	ProperStrand	32	chr16	23110454	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-6.1156
chr17	27700153	27700228	protein_coding	Hmga1	utr3	ENSMUSG00000046711	ProperStrand	180	chr16	23110454	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-1.7149
chr9	78326545	78326614	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr16	18128079	18128096	protein_coding	Rtn4r	intron	ENSMUSG00000043811	NonProperStrand	6	1	-11.0680
chr6	51413214	51413238	protein_coding	Hnrnpa2b1	utr3	ENSMUSG00000004980	ProperStrand	166	chr7	134461663	134461731	protein_coding	Itgal	intron	ENSMUSG00000030830	ProperStrand	38	3	-20.0168
chr2	125389949	125389966	protein_coding	Cep152	exon	ENSMUSG00000068394	ProperStrand	60	chr18	74938045	74938122	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	ProperStrand	1022	1	-7.6483
chr1	60466567	60533799	protein_coding	Abi2	utr3	ENSMUSG00000026782	ProperStrand	15	chr16	23110916	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-3.8284
chr6	29501919	29504849	protein_coding	Tnpo3	exon	ENSMUSG00000012535	ProperStrand	58	chr5	130295522	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-5.3145
chr2	105012751	105012769	protein_coding	Wt1	utr3	ENSMUSG00000016458	NonProperStrand	338	chr7	148634701	148634797	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-2.1734
chr5	31459751	31459841	protein_coding	Gtf3c2	utr3	ENSMUSG00000029144	ProperStrand	22	chr3	96072615	96072701	protein_coding	Hist2h3b	utr5	ENSMUSG00000074403	ProperStrand	4	1	-21.1342
chr2	31801444	31801460	protein_coding	Lamc3	utr3	ENSMUSG00000026840	NonProperStrand	14	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.3681
chr1	136521446	136524634	protein_coding	Kdm5b	utr5	ENSMUSG00000042207	ProperStrand	223	chr11	69483148	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-1.2944
chr16	56035865	56035989	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	chr4	132394364	132394400	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	1	-4.8355
chr7	28289760	28303844	protein_coding	Prx	utr5	ENSMUSG00000053198	ProperStrand	21	chr1	162967507	162967566	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	8	-21.0763
chr9	122978369	122978408	protein_coding-noncoding	Zdhhc3	utr3	ENSMUSG00000025786	ProperStrand	9	chr5	130300493	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-6.1422
chr8	82183093	82183191	protein_coding	Otud4	exon	ENSMUSG00000036990	ProperStrand	45	chr7	148634777	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-4.5330
chr8	63523126	63528599	protein_coding	Nek1	exon	ENSMUSG00000031644	ProperStrand	23	chr9	120039596	120039687	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-8.5060
chr5	34227668	34228059	protein_coding	Whsc1	exon	ENSMUSG00000057406	ProperStrand	409	chr5	74489615	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-0.7548
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr15	88539201	88539301	protein_coding	Brd1	intron	ENSMUSG00000022387	ProperStrand	70	1	-6.0650
chr3	30036591	30036610	protein_coding	Mecom	intron	ENSMUSG00000027684	ProperStrand	12	chr15	82980191	82980224	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-10.4068
chr5	122580412	122584741	protein_coding	Ccdc63	utr5	ENSMUSG00000043036	ProperStrand	120	chr9	64022854	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-6.6479
chr16	20680077	20686996	protein_coding	Eif4g1	exon	ENSMUSG00000045983	ProperStrand	199	chr9	15119646	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	30	-19.4149
chr18	10052128	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr11	6428049	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	5	-2.4232
chr8	98393461	98394684	protein_coding	Got2	exon	ENSMUSG00000031672	ProperStrand	85	chr2	130101988	130102056	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-4.6828
chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	chr19	8799829	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-1.5061
chr7	108078591	108078607	protein_coding	Arhgef17	exon	ENSMUSG00000032875	NonProperStrand	8	chr12	104678307	104678323	protein_coding	Ifi27l1	exon	ENSMUSG00000064215	ProperStrand	32	2	-19.0196
chr13	108538715	108538774	protein_coding	Zswim6	intron	ENSMUSG00000032846	ProperStrand	23	chr7	29136569	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.1043
chr13	76341035	76341055	protein_coding	Fam81b	intron	ENSMUSG00000078966	NonProperStrand	220	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	3	-8.3993
chr15	5126725	5126808	protein_coding	Prkaa1	exon	ENSMUSG00000050697	ProperStrand	10	chr19	8963116	8963173	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	7	-inf
chr3	34550773	34550853	protein_coding	Sox2	utr3	ENSMUSG00000074637	ProperStrand	299	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	11	-10.6583
chr16	34262761	34262778	protein_coding	Kalrn	exon	ENSMUSG00000061751	ProperStrand	135	chr12	112779147	112779213	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	2	-5.5732
chr4	53873602	53873651	protein_coding	Tmem38b	utr3	ENSMUSG00000028420	ProperStrand	22	chr13	30632547	30632617	protein_coding	Uqcrfs1	utr3	ENSMUSG00000038462	ProperStrand	24	1	-17.1497
chr9	110281118	110281134	protein_coding	Scap	exon	ENSMUSG00000032485	NonProperStrand	3	chr4	131865855	131865986	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.6896
chr1	88247483	88247501	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chr9	120037992	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	3	-1.1770
chr2	90235292	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	128929446	128930986	protein_coding	Polr1b	exon	ENSMUSG00000027395	ProperStrand	27	1	-6.0220
chr5	74489224	74489324	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr4	115484059	115484081	protein_coding	Atpaf1	utr3	ENSMUSG00000028710	ProperStrand	202	1	-3.3192
chr7	83278379	83278469	LTR	IAPEY2_LTR	ERVK	chr7IAPEY2_LTR83278315	ProperStrand	1	chr8	94548600	94548680	Simple_repeat	(GA)n	Simple_repeat	chr8(GA)n94548591	NonProperStrand	1	1	-inf
chr7	29136525	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	chr12	92811869	92812015	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	6	-1.1574
chr5	20404387	20404404	protein_coding	Rsbn1l	intron	ENSMUSG00000039968	NonProperStrand	7	chr10	23505185	23505238	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-5.0629
chr9	85216764	85216782	protein_coding	Fam46a	utr3	ENSMUSG00000032265	ProperStrand	7	chr2	130101260	130101308	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	3	-21.6114
chr4	43505848	43505931	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr17	35607429	35607445	protein_coding	H2-Q10	exon	ENSMUSG00000067235	NonProperStrand	2	1	-10.3311
chr11	62366017	62366117	protein_coding	Ubb	exon	ENSMUSG00000019505	ProperStrand	32	chr5	147396397	147396413	protein_coding	Gpr12	utr5	ENSMUSG00000041468	ProperStrand	15	3	-19.4420
chr8	88242825	88246628	protein_coding	Itfg1	exon	ENSMUSG00000031703	ProperStrand	38	chr2	32818903	32818941	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-6.3709
chr1	168209715	168209732	protein_coding	Ildr2	intron	ENSMUSG00000040612	NonProperStrand	26	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-6.8655
chr13	55349351	55414629	protein_coding	Nsd1	exon	ENSMUSG00000021488	ProperStrand	186	chr7	29136575	29136655	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-1.5380
chr15	78823749	78823797	protein_coding	Triobp	exon	ENSMUSG00000033088	ProperStrand	29	chr1	89673752	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	2	-7.7153
chr2	158185536	158185653	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr7	52382237	52382274	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	4	-7.1533
chr18	77911662	77911723	protein_coding	8030462N17Rik	intron	ENSMUSG00000047466	ProperStrand	17	chr12	60141322	60141412	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-9.3727
chr6	47731663	47731709	misc_RNA	Y_RNA	.	ENSMUSG00000064945	ProperStrand	93	chr10	23505165	23505255	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-1.4597
chr13	52742450	52742466	protein_coding	Syk	utr3	ENSMUSG00000021457	NonProperStrand	125	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-10.2118
chr2	22445079	22445105	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	chr19	8800085	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	6	-13.6802
chr2	90235292	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	139430077	139430094	protein_coding	Chst15	exon	ENSMUSG00000030930	ProperStrand	20	2	-10.7530
chr2	130100412	130100428	protein_coding	Nop56	exon	ENSMUSG00000027405	ProperStrand	125	chr14	118915756	118915803	protein_coding	Abcc4	exon	ENSMUSG00000032849	ProperStrand	137	1	-10.1824
chr3	137527595	137528121	protein_coding	H2afz	utr5	ENSMUSG00000037894	ProperStrand	72	chr16	23111696	23111776	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.6212
chr9	89987197	89988628	protein_coding	Morf4l1	exon	ENSMUSG00000062270	ProperStrand	33	chr19	8963031	8963081	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.3267
chr5	53234811	53236616	protein_coding	Anapc4	exon	ENSMUSG00000029176	ProperStrand	11	chr10	110918659	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-6.7706
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr5	130038419	130038436	protein_coding	Sfswap	intron	ENSMUSG00000029439	NonProperStrand	16	1	-10.4721
chr5	130772633	130772649	protein_coding	Tyw1	exon	ENSMUSG00000056310	NonProperStrand	5	chr2	26494708	26494759	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-8.0805
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr14	31827479	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-1.9783
chr8	73430418	73430436	protein_coding	Mtap1s	intron	ENSMUSG00000019261	ProperStrand	60	chr10	23505185	23505246	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.2332
chr16	17088461	17088489	protein_coding	Ppil2	utr3	ENSMUSG00000022771	ProperStrand	6	chr14	64829132	64829149	protein_coding	Msra	intron	ENSMUSG00000054733	NonProperStrand	84	1	-17.3924
chr9	15119293	15119383	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	chr1	145626114	145626194	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-1.2234
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr3	152878728	152878755	protein_coding	St6galnac3	intron	ENSMUSG00000052544	ProperStrand	19	1	-6.7268
chr5	118376503	118376519	protein_coding	Nos1	exon	ENSMUSG00000029361	NonProperStrand	237	chr9	120038552	120038607	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-0.9145
chr11	80048437	80048485	protein_coding	Rhot1	intron	ENSMUSG00000017686	ProperStrand	40	chr16	23110913	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-5.1967
chr1	132640340	132640357	protein_coding	AA986860	exon	ENSMUSG00000042510	NonProperStrand	8	chr18	35716830	35716878	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-5.9895
chr5	140397970	140397986	protein_coding	Elfn1	intron	ENSMUSG00000048988	NonProperStrand	8	chr9	64024466	64024568	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	1	-12.4979
chr2	23011328	23011344	protein_coding	Mastl	exon	ENSMUSG00000026779	ProperStrand	60	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-8.9266
chr15	79844541	79844557	protein_coding	Pdgfb	utr5	ENSMUSG00000000489	NonProperStrand	4	chr11	6428139	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-8.6824
chr3	157715800	157715855	protein_coding	Lrrc40	exon	ENSMUSG00000063052	ProperStrand	147	chr16	23110455	23110526	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-2.1399
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr11	75300381	75300453	protein_coding	Prpf8	utr5	ENSMUSG00000020850	ProperStrand	255	1	-5.9219
chr2	29926980	29927070	protein_coding	Set	utr3	ENSMUSG00000054766	ProperStrand	167	chr7	51505506	51505591	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	10	-inf
chr17	46814084	46814100	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr6	70794803	70794819	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	1	-7.3499
chr3	66790039	66790055	protein_coding	Rsrc1	utr5	ENSMUSG00000034544	NonProperStrand	71	chr3	68889050	68889096	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-2.9543
chr10	127543739	127543821	protein_coding	Baz2a	intron	ENSMUSG00000040054	ProperStrand	274	chr9	15118332	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-1.0275
chrX	20245990	20246058	protein_coding	Uba1	exon	ENSMUSG00000001924	ProperStrand	156	chr11	79267696	79272364	protein_coding	Nf1	exon	ENSMUSG00000020716	ProperStrand	42	1	-12.1153
chr7	16677708	16678201	protein_coding	Zfp541	exon	ENSMUSG00000078796	ProperStrand	33	chrX	34622906	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-4.2854
chr4	140259856	140259882	protein_coding	Rcc2	intron	ENSMUSG00000040945	ProperStrand	228	chr7	136414269	136414289	protein_coding	Ppapdc1a	intron	ENSMUSG00000070366	NonProperStrand	5	1	-15.7994
chr17	39979940	39980044	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr17	24857717	24857852	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	21	-5.8154
chr5	117541840	117555175	protein_coding	Suds3	exon	ENSMUSG00000066900	ProperStrand	22	chr4	131908236	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	6	-17.1806
chr8	64000678	64000768	protein_coding	Palld	intron	ENSMUSG00000058056	ProperStrand	39	chr5	130300439	130300519	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.2732
chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	chr17	24857729	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.7007
chr8	127052937	127053044	protein_coding	Cog2	intron	ENSMUSG00000031979	ProperStrand	8	chrX	156315496	156315519	protein_coding	Sh3kbp1	intron	ENSMUSG00000040990	ProperStrand	67	6	-18.9182
chr14	33153227	33153832	protein_coding	Ogdhl	exon	ENSMUSG00000021913	ProperStrand	182	chr2	22444219	22444238	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-5.5856
chr9	15118343	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	NonProperStrand	11	chr15	34370591	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	NonProperStrand	21	1	-18.6067
chr6	112689098	112689322	protein_coding	Srgap3	exon	ENSMUSG00000030257	NonProperStrand	208	chr1	102076758	102076790	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	1	-6.9580
chr10	77060495	77060595	protein_coding	Pttg1ip	utr3	ENSMUSG00000009291	ProperStrand	28	chr3	156823616	156823632	protein_coding	Negr1	exon	ENSMUSG00000040037	ProperStrand	14	1	-17.9160
chr1	15795813	15795850	protein_coding	Terf1	exon	ENSMUSG00000025925	ProperStrand	19	chr8	32260335	32260383	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	2	-11.1744
chr2	37300892	37300919	protein_coding	Rabgap1	intron	ENSMUSG00000035437	ProperStrand	20	chr11	97641452	97641535	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	1	-10.0758
chr3	95463727	95463752	protein_coding	Mcl1	exon	ENSMUSG00000038612	ProperStrand	75	chr16	23111373	23111446	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-1.9291
chr4	94574354	94574370	protein_coding	4930579C15Rik	exon	ENSMUSG00000028575	ProperStrand	5	chr12	17552959	17553004	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-10.1945
chr18	83156768	83156784	protein_coding	Zfp516	exon	ENSMUSG00000058881	NonProperStrand	15	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-8.6280
chr3	88125555	88125573	protein_coding	Cct3	utr3	ENSMUSG00000001416	ProperStrand	82	chr18	35716832	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.6739
chr11	70748677	70751034	protein_coding	Rabep1	exon	ENSMUSG00000020817	NonProperStrand	5	chr1	162965563	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-8.2678
chr7	30950749	30950849	protein_coding	Zfp146	intron	ENSMUSG00000037029	ProperStrand	6	chr11	97642952	97643014	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-6.9580
chr12	8942825	8942861	protein_coding	Laptm4a	exon	ENSMUSG00000020585	ProperStrand	15	chr7	29136590	29136653	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.9384
chr17	45707440	45707665	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chrX	147523669	147523699	protein_coding	Fgd1	utr3	ENSMUSG00000025265	ProperStrand	96	3	-13.4019
chr3	88715214	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr9	65044377	65049649	snRNA	ENSMUSG00000075930_U5	.	ENSMUSG00000075930	ProperStrand	175	2	-8.4307
chr2	105233776	105233860	protein_coding	Rcn1	exon	ENSMUSG00000005973	ProperStrand	24	chr16	23111391	23111481	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	5	-12.7174
chr6	87682919	87699131	protein_coding	Ccdc48	exon	ENSMUSG00000068263	NonProperStrand	1	chr3	68889152	68889253	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-inf
chr7	74189892	74189909	protein_coding	Adamts17	intron	ENSMUSG00000058145	NonProperStrand	73	chr7	52974975	52975003	protein_coding	Rpl18	exon	ENSMUSG00000059070	ProperStrand	116	1	-11.5948
chr2	90235294	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	115243472	115243576	protein_coding	Cyp4a31	exon	ENSMUSG00000028712	ProperStrand	61	1	-4.4311
chr7	110699337	110699396	protein_coding	Olfr613	utr5	ENSMUSG00000078624	ProperStrand	16	chr1	162968213	162968262	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-9.4845
chr6	119918510	119918590	protein_coding	Wnk1	exon	ENSMUSG00000045962	ProperStrand	221	chr6	119910667	119918508	protein_coding	Wnk1	exon	ENSMUSG00000089896	ProperStrand	2	2	-inf
chr1	66741087	66741103	protein_coding	Unc80	exon	ENSMUSG00000055567	NonProperStrand	212	chr7	117166721	117166760	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-2.5001
chr3	102842778	102842798	protein_coding	Csde1	exon	ENSMUSG00000068823	ProperStrand	122	chr15	98350184	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-3.4260
chr5	121655522	121655612	protein_coding	Rpl6	exon	ENSMUSG00000029614	ProperStrand	332	chr18	35714196	35714276	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-0.7838
chr10	110404806	110404824	protein_coding	Zdhhc17	exon	ENSMUSG00000035798	NonProperStrand	4	chr7	53653469	53653487	protein_coding	Kcnc1	exon	ENSMUSG00000058975	ProperStrand	21	1	-19.5361
chr16	32680112	32681365	protein_coding	Tnk2	exon	ENSMUSG00000022791	ProperStrand	86	chr16	23111431	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-1.6479
chr4	90923104	90923121	protein_coding	Elavl2	intron	ENSMUSG00000008489	ProperStrand	52	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-7.2093
chr14	21554953	21555033	protein_coding	Camk2g	utr3	ENSMUSG00000021820	ProperStrand	24	chr9	15119675	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.3157
chr7	152443534	152443624	protein_coding	Tpcn2	intron	ENSMUSG00000048677	ProperStrand	4	chr4	131908691	131908781	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-6.2660
chr2	26767764	26767807	snoRNA	ENSMUSG00000064829_SNORD36	.	ENSMUSG00000064829	ProperStrand	98	chr19	8963025	8963125	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.5030
chr10	80643727	80645181	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr11	51551300	51551424	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	12	-19.4124
chr5	144645622	144645699	protein_coding	Eif2ak1	exon	ENSMUSG00000029613	ProperStrand	37	chr7	29136527	29136574	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	4	-11.0391
chr11	116535935	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr15	79946722	79946822	protein_coding	Syngr1	utr3	ENSMUSG00000022415	ProperStrand	51	1	-6.2312
chr8	59344882	59344962	SINE	B2_Mm2	B2	chr8B2_Mm259344859	ProperStrand	1	chr8	59972484	59972574	lincRNA	2500002B13Rik	intron	ENSMUSG00000086276	ProperStrand	46	1	-inf
chr4	3762141	3762423	protein_coding	Rps20	exon	ENSMUSG00000028234	ProperStrand	71	chr11	51551274	51551338	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	1	-7.3638
chr10	128257530	128257546	protein_coding	Ormdl2	utr5	ENSMUSG00000025353	ProperStrand	51	chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-6.7765
chr8	64017612	64028377	protein_coding	Palld	exon	ENSMUSG00000058056	NonProperStrand	125	chr7	29136527	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	11	-19.3483
chr11	67167096	67167112	protein_coding	Myh13	exon	ENSMUSG00000060180	ProperStrand	145	chr11	6428103	6428156	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.7064
chr7	28146782	28146798	protein_coding	Spnb4	exon	ENSMUSG00000011751	NonProperStrand	84	chr4	131908236	131908344	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-4.5572
chr8	72856220	72856300	protein_coding	Upf1	utr3	ENSMUSG00000058301	ProperStrand	90	chr17	24857764	24857854	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.6492
chr8	11054389	11054406	lincRNA	9530052E02Rik	exon	ENSMUSG00000085270	NonProperStrand	12	chr15	79654442	79654459	protein_coding	Cbx6	utr3	ENSMUSG00000089715	NonProperStrand	11	1	-19.9991
chr15	97811251	97811267	protein_coding	Col2a1	exon	ENSMUSG00000022483	ProperStrand	34	chr16	23110841	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.8923
chr4	108278918	108278934	protein_coding	Orc1	exon	ENSMUSG00000028587	ProperStrand	161	chr11	106362304	106362335	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-3.9451
chr4	139572479	139572497	LTR	MERVL_2A-int	ERVL	chr4MERVL_2A-int139571531	ProperStrand	39	chr3	88715213	88715230	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-8.0958
chr2	165904622	165904638	protein_coding	Sulf2	exon	ENSMUSG00000006800	ProperStrand	171	chr11	55296277	55296332	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-4.1553
chr9	22186683	22186722	protein_coding	Anln	exon	ENSMUSG00000036777	ProperStrand	133	chr11	97642952	97643007	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.2370
chr7	67129997	67130764	protein_coding	Snrpn	exon	ENSMUSG00000000948	ProperStrand	32	chr4	114741487	114741504	protein_coding	Tal1	utr3	ENSMUSG00000028717	NonProperStrand	69	1	-14.3005
chr18	77336025	77336098	protein_coding	Pias2	exon	ENSMUSG00000025423	ProperStrand	52	chr9	15119650	15119740	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.8805
chr6	28836611	28838088	protein_coding	Snd1	exon	ENSMUSG00000001424	NonProperStrand	14	chr7	116664817	116664917	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-5.2856
chr1	116768976	116769056	LINE	L1_Mus1	L1	chr1L1_Mus1116768693	NonProperStrand	1	chr1	116087573	116087663	LTR	RLTR22_Mur	ERVK	chr1RLTR22_Mur116087134	NonProperStrand	1	1	-inf
chr7	31895791	31899711	protein_coding	Hpn	utr5	ENSMUSG00000001249	ProperStrand	126	chr9	120039623	120039658	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.0366
chr1	169298063	169298140	protein_coding	Aldh9a1	utr3	ENSMUSG00000026687	ProperStrand	58	chr4	149026816	149026832	protein_coding	Pik3cd	exon	ENSMUSG00000039936	ProperStrand	151	1	-11.5295
chr17	31146957	31146974	protein_coding	Umodl1	utr3	ENSMUSG00000054134	NonProperStrand	5	chr5	121655052	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-8.7807
chr12	105934984	105935066	protein_coding	Dicer1	exon	ENSMUSG00000041415	ProperStrand	61	chr1	120920069	120920159	protein_coding	Gli2	intron	ENSMUSG00000048402	ProperStrand	148	1	-11.4677
chr3	22196327	22196384	LTR	ETnERV2-int	ERVK	chr3ETnERV2-int22196318	ProperStrand	1	chr6	24684480	24684497	protein_coding	Hyal6	exon	ENSMUSG00000029679	NonProperStrand	114	1	-inf
chr1	166192814	166192831	protein_coding	Slc19a2	exon	ENSMUSG00000040918	NonProperStrand	3	chr15	103070939	103071879	protein_coding	Hnrnpa1	exon	ENSMUSG00000046434	ProperStrand	68	1	-19.2957
chr6	47746806	47746875	protein_coding	Pdia4	exon	ENSMUSG00000025823	ProperStrand	41	chr4	131908806	131908896	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.7814
chr4	149090692	149090776	protein_coding	Tmem201	utr3	ENSMUSG00000044700	ProperStrand	60	chr17	39985258	39985295	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	3	-13.6862
chr3	116298267	116298284	protein_coding	Sass6	intron	ENSMUSG00000027959	ProperStrand	10	chr11	106362556	106362636	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-11.0566
chr15	8080172	8080204	protein_coding	Nup155	exon	ENSMUSG00000022142	ProperStrand	91	chrX	93136011	93136027	protein_coding	Las1l	exon	ENSMUSG00000057421	ProperStrand	248	1	-9.6320
chr11	74530026	74530116	protein_coding	Pafah1b1	intron	ENSMUSG00000020745	ProperStrand	20	chr11	69481351	69481431	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.2928
chr8	86770489	86770523	protein_coding	D8Ertd738e	exon	ENSMUSG00000019362	ProperStrand	7	chr19	43579408	43579429	protein_coding	Got1	intron	ENSMUSG00000025190	NonProperStrand	147	1	-15.9467
chr2	181236617	181236674	protein_coding	Tpd52l2	exon	ENSMUSG00000000827	ProperStrand	20	chr4	116826700	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	2	-14.3101
chr5	116013396	116013486	protein_coding	Rplp0	utr3	ENSMUSG00000067274	ProperStrand	291	chr2	152180162	152180242	pseudogene	Gm14165	.	ENSMUSG00000081434	ProperStrand	1	1	-inf
chr3	82816758	82816774	protein_coding	Fgg	exon	ENSMUSG00000033860	NonProperStrand	321	chr1	137283966	137284024	protein_coding	Ipo9	exon	ENSMUSG00000041879	ProperStrand	53	3	-19.3391
chr14	45949538	45949554	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	chr16	4213250	4213329	protein_coding	Crebbp	utr5	ENSMUSG00000022521	ProperStrand	56	1	-10.0607
chr5	3693225	3693241	protein_coding	Ankib1	exon	ENSMUSG00000040351	NonProperStrand	98	chr11	55296243	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	2	-8.5711
chr9	89995297	89997163	protein_coding	Morf4l1	exon	ENSMUSG00000062270	ProperStrand	33	chr5	130300473	130300553	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.5813
chr1	162968463	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	chr1	145626114	145626199	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-1.9613
chr8	87195455	87195488	protein_coding	Nacc1	utr3	ENSMUSG00000001910	ProperStrand	130	chr6	83111671	83111687	protein_coding	1700003E16Rik	exon	ENSMUSG00000030030	ProperStrand	352	1	-8.2216
chr10	80643686	80643758	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr4	143748332	143749010	protein_coding	Oog3	exon	ENSMUSG00000050810	NonProperStrand	78	1	-5.5841
chr7	117147181	117147210	snRNA	ENSMUSG00000065389_U1	.	ENSMUSG00000065389	ProperStrand	12	chr11	97642952	97643020	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-13.1361
chr9	78023110	78023162	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr4	86232360	86232460	snoRNA	ENSMUSG00000088958_Scarna8	.	ENSMUSG00000088958	ProperStrand	366	5	-11.5253
chr17	13112509	13112586	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	chr10	23505559	23505627	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	25	-19.5073
chr17	25970617	25970641	lincRNA	Gm17480	intron	ENSMUSG00000091321	ProperStrand	8	chr3	108357255	108357355	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	3	-18.7944
chr7	148628403	148628868	protein_coding	Lrdd	exon	ENSMUSG00000025507	ProperStrand	14	chr16	23110990	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.2008
chr9	48833983	48833999	protein_coding	Usp28	exon	ENSMUSG00000032267	NonProperStrand	7	chr7	116664112	116665123	protein_coding	Rpl27a	exon	ENSMUSG00000046364	ProperStrand	149	1	-15.9186
chr8	11054389	11054406	lincRNA	9530052E02Rik	exon	ENSMUSG00000085270	NonProperStrand	12	chr18	35716832	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-5.1577
chr2	120872244	120872260	protein_coding	Tgm5	exon	ENSMUSG00000053675	NonProperStrand	163	chr7	52382014	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-4.7598
chr7	19736640	19736711	protein_coding	Snrpd2	exon	ENSMUSG00000040824	ProperStrand	23	chr16	23110841	23110867	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.4133
chr7	105281396	105281486	protein_coding	Capn5	exon	ENSMUSG00000035547	ProperStrand	99	chr16	23111690	23111751	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	11	-19.5740
chr13	13557715	13557770	protein_coding	Nid1	exon	ENSMUSG00000005397	ProperStrand	112	chr16	23111773	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.0093
chr11	77634624	77636783	protein_coding	Myo18a	exon	ENSMUSG00000000631	ProperStrand	124	chr5	66651465	66651481	protein_coding	Nsun7	utr5	ENSMUSG00000029206	NonProperStrand	73	1	-11.4615
chr5	122017966	122018968	protein_coding	Aldh2	utr3	ENSMUSG00000029455	ProperStrand	108	chr7	116663709	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.5667
chr2	26493397	26493487	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	NonProperStrand	10	chr16	23111738	23111827	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	NonProperStrand	47	1	-17.7383
chr1	39148095	39148114	LTR	MT2A	ERVL	chr1MT2A39147922	NonProperStrand	2	chr7	38354919	38354935	protein_coding	Zfp536	exon	ENSMUSG00000043456	NonProperStrand	236	1	-17.7683
chr19	8799358	8799431	snoRNA	ENSMUSG00000065280_SNORD28	.	ENSMUSG00000065280	ProperStrand	269	chr2	130101986	130102051	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	6	-14.5173
chr5	137960315	137960369	protein_coding	Gigyf1	exon	ENSMUSG00000029714	ProperStrand	49	chr2	26494708	26494798	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.4758
chr2	90235295	90235340	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	135635725	135635825	protein_coding	Tbl2	utr3	ENSMUSG00000005374	ProperStrand	28	1	-5.9497
chr11	6428037	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr7	67125763	67125825	snoRNA	ENSMUSG00000089375_Snord107	.	ENSMUSG00000089375	ProperStrand	451	9	-8.5502
chr11	5441764	5441781	protein_coding	Ccdc117	intron	ENSMUSG00000020482	NonProperStrand	20	chr10	23505173	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-7.8391
chrX	147476948	147476965	SINE	RSINE1	B4	chrXRSINE1147476844	NonProperStrand	20	chr16	23110962	23110999	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.6223
chr11	3078251	3078341	protein_coding	Sfi1	intron	ENSMUSG00000023764	NonProperStrand	20	chr6	8969568	8969648	protein_coding	Nxph1	intron	ENSMUSG00000046178	NonProperStrand	5	1	-19.4763
chr19	9042760	9042839	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	chr10	90581048	90581138	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-1.4492
chr6	72388906	72388923	protein_coding	Mat2a	intron	ENSMUSG00000053907	ProperStrand	51	chr2	26494708	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.4022
chr12	111931317	111931377	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr7	148155601	148155636	protein_coding	Ifitm1	utr3	ENSMUSG00000025491	ProperStrand	18	1	-10.6970
chr16	37384897	37384913	protein_coding	Stxbp5l	utr5	ENSMUSG00000022829	ProperStrand	332	chr5	129526446	129526601	protein_coding	Ran	exon	ENSMUSG00000029430	ProperStrand	82	1	-9.2586
chr19	46665625	46665651	protein_coding	Sfxn2	exon	ENSMUSG00000025036	ProperStrand	13	chr1	89673685	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-6.2268
chr6	56794657	56794681	protein_coding	Fkbp9	intron	ENSMUSG00000029781	ProperStrand	39	chr10	23505152	23505253	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.8710
chr16	8648106	8648148	protein_coding	Pmm2	intron	ENSMUSG00000022711	ProperStrand	12	chr16	23110966	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-4.4633
chr19	32832413	32832443	protein_coding	Pten	utr5	ENSMUSG00000013663	ProperStrand	20	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-5.7229
chr19	8799829	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	chr14	76372292	76372364	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	1	-1.2194
chr7	20218871	20218901	protein_coding	Clptm1	utr3	ENSMUSG00000002981	ProperStrand	109	chr8	107726431	107739834	protein_coding	Cbfb	exon	ENSMUSG00000031885	ProperStrand	21	3	-20.1715
chr2	121759226	121759252	protein_coding	Casc4	exon	ENSMUSG00000060227	ProperStrand	18	chr7	117189957	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	11	-inf
chr8	108432835	108432935	protein_coding	Pskh1	intron	ENSMUSG00000048310	ProperStrand	13	chr2	26768400	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-8.6772
chr6	37438095	37438185	LINE	Lx3_Mus	L1	chr6Lx3_Mus37437759	ProperStrand	1	chr6	37438229	37438309	LTR	MYSERV6-int	ERVK	chr6MYSERV6-int37438244	NonProperStrand	1	1	-inf
chr5	34695663	34695686	protein_coding	Rnf4	utr3	ENSMUSG00000029110	ProperStrand	27	chr15	98569440	98569540	protein_coding	Arf3	utr3	ENSMUSG00000051853	ProperStrand	41	1	-15.7327
chr1	24333002	24334887	protein_coding	Col19a1	exon	ENSMUSG00000026141	ProperStrand	37	chr5	108334195	108334237	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-5.7635
chr7	25082649	25082697	protein_coding	Zfp61	utr5	ENSMUSG00000050605	ProperStrand	6	chr11	69483190	69483236	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-6.9324
chr3	104603235	104603325	protein_coding	Mov10	exon	ENSMUSG00000002227	ProperStrand	96	chr8	35882385	35882467	protein_coding	Dusp4	utr3	ENSMUSG00000031530	ProperStrand	17	1	-14.9261
chr19	8800357	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	chr3	95980283	95980410	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	8	-1.4306
chr2	128926916	128951735	protein_coding	Polr1b	exon	ENSMUSG00000027395	ProperStrand	27	chr4	131908236	131908409	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-9.7699
chr8	3189127	3189178	protein_coding	Insr	exon	ENSMUSG00000005534	ProperStrand	25	chr5	124566336	124566353	protein_coding	Arl6ip4	utr5	ENSMUSG00000029404	ProperStrand	29	1	-16.5927
chrX	111782797	111782887	LINE	Lx3_Mus	L1	chrXLx3_Mus111781247	NonProperStrand	1	chrX	111782917	111783007	SINE	B1_Mus1	Alu	chrXB1_Mus1111782874	NonProperStrand	1	1	-inf
chr4	133574127	133574143	protein_coding	Lin28a	exon	ENSMUSG00000050966	ProperStrand	55	chr3	88715213	88715230	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-7.4076
chr13	46845627	46845680	protein_coding	Kif13a	utr3	ENSMUSG00000021375	ProperStrand	466	chr9	120039605	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	6	-4.6528
chr5	36945248	37064319	protein_coding	D5Ertd579e	exon	ENSMUSG00000029190	ProperStrand	43	chr4	131865382	131865488	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	8	-inf
chr11	50014352	50021054	protein_coding	Sqstm1	exon	ENSMUSG00000015837	ProperStrand	36	chr16	23110970	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.6986
chr11	107032959	107033001	protein_coding	Nol11	exon	ENSMUSG00000018433	ProperStrand	12	chr11	69481335	69481441	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	3	-14.7772
chr1	88247779	88247869	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	chr2	130101991	130102071	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	7	-1.1913
chr3	96527940	96527956	protein_coding	Polr3c	exon	ENSMUSG00000028099	NonProperStrand	75	chr4	43526327	43526362	protein_coding	Car9	utr3	ENSMUSG00000028463	NonProperStrand	35	1	-13.9540
chr4	136367944	136368016	protein_coding	Ephb2	intron	ENSMUSG00000028664	ProperStrand	21	chr8	73419656	73419756	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-5.1207
chr3	30515481	30515551	protein_coding	Mynn	exon	ENSMUSG00000037730	ProperStrand	9	chr2	26493395	26493485	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-7.5048
chr2	90235298	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr16	18283302	18283319	protein_coding	Dgcr8	exon	ENSMUSG00000022718	ProperStrand	67	2	-7.1090
chr17	46814084	46814100	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr9	64022854	64022878	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-4.0473
chr1	63619507	63619555	protein_coding	Adam23	exon	ENSMUSG00000025964	ProperStrand	59	chr2	130101985	130102052	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-5.3894
chr4	131908438	131908466	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr7	4945735	4945751	protein_coding	Zfp579	exon	ENSMUSG00000051550	ProperStrand	13	1	-10.3613
chr11	67005924	67005940	protein_coding	Myh2	exon	ENSMUSG00000033196	ProperStrand	66	chr5	23031348	23031364	protein_coding	Srpk2	exon	ENSMUSG00000062604	ProperStrand	51	1	-13.4526
chr7	147130816	147130866	protein_coding	Utf1	exon	ENSMUSG00000047751	ProperStrand	67	chr17	24857720	24857810	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.1142
chr1	93320500	93320517	protein_coding	Per2	exon	ENSMUSG00000055866	NonProperStrand	44	chr1	187066820	187066920	snoRNA	ENSMUSG00000077571_Snora36b	.	ENSMUSG00000077571	ProperStrand	244	6	-inf
chr5	72909520	72913435	protein_coding	Nfxl1	exon	ENSMUSG00000072889	ProperStrand	17	chr7	117189991	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-5.7589
chr17	46814084	46814100	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr19	8799022	8799057	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-2.0824
chr2	90235301	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	112387973	112387989	antisense	Gm17344	.	ENSMUSG00000078143	NonProperStrand	100	1	-3.5047
chr15	11789095	11789185	protein_coding	Npr3	intron	ENSMUSG00000022206	ProperStrand	6	chr15	4458688	4458768	protein_coding	Plcxd3	intron	ENSMUSG00000049148	ProperStrand	1	1	-inf
chr10	94151578	94151595	protein_coding	Ccdc41	utr5	ENSMUSG00000020024	NonProperStrand	34	chr4	140121137	140121153	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	1	-12.8171
chr17	25963020	25963110	protein_coding	Wdr24	exon	ENSMUSG00000025737	ProperStrand	5	chr16	23111708	23111788	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-6.6731
chr10	13687883	13687899	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr10	5992595	5992624	protein_coding	Akap12	exon	ENSMUSG00000038587	ProperStrand	1008	1	-3.1482
chr11	15212155	15212171	LINE	Lx	L1	chr11Lx15211662	ProperStrand	54	chrX	84483703	84483746	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-8.4600
chr10	79588310	79588831	protein_coding	Stk11	exon	ENSMUSG00000003068	ProperStrand	24	chr4	131865868	131865958	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.3401
chr17	63980191	63980281	LINE	L1_Mus1	L1	chr17L1_Mus163977793	ProperStrand	1	chr17	82967064	82967144	LINE	L1_Mus1	L1	chr17L1_Mus182966719	ProperStrand	1	1	-inf
chr2	166405493	166405515	protein_coding	Prex1	intron	ENSMUSG00000039621	NonProperStrand	9	chr4	131865855	131865980	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-8.7951
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr4	116826700	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-1.1553
chr6	124348949	124349350	protein_coding	Pex5	exon	ENSMUSG00000005069	ProperStrand	27	chr11	53515505	53515536	protein_coding	Rad50	exon	ENSMUSG00000020380	ProperStrand	61	3	-19.9330
chr4	132089435	132089462	protein_coding	Atpif1	exon	ENSMUSG00000054428	ProperStrand	15	chr7	117189959	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	3	-14.0690
chr6	107481509	107481534	protein_coding	Lrrn1	intron	ENSMUSG00000034648	ProperStrand	2	chr5	130300487	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-inf
chr4	138953394	138955545	protein_coding	Ubr4	exon	ENSMUSG00000066036	ProperStrand	304	chrX	34622931	34623021	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-0.7158
chr6	83111671	83111687	protein_coding	1700003E16Rik	exon	ENSMUSG00000030030	ProperStrand	352	chr7	118219704	118219740	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-1.1951
chr2	90235295	90235327	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	134671464	134671518	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	2	-0.8107
chr19	4801863	4801916	protein_coding	Rbm14	intron	ENSMUSG00000006456	ProperStrand	84	chr7	116664811	116664901	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-5.4859
chr11	62418008	62418040	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr3	85942494	85943069	protein_coding	Rps3a	exon	ENSMUSG00000028081	ProperStrand	177	3	-15.4489
chr15	81415814	81415868	protein_coding	Ep300	utr5	ENSMUSG00000055024	ProperStrand	118	chr7	116663714	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-2.7065
chr15	77600296	77600396	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr17	45556611	45556652	protein_coding	Cdc5l	exon	ENSMUSG00000023932	ProperStrand	59	3	-19.2274
chr8	74985720	74985946	protein_coding	Cherp	exon	ENSMUSG00000052488	ProperStrand	43	chr3	123210885	123210975	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.6276
chr9	31658407	31658497	protein_coding	Barx2	intron	ENSMUSG00000032033	NonProperStrand	4	chr9	31658549	31658629	protein_coding	Barx2	intron	ENSMUSG00000032033	ProperStrand	1	1	-inf
chr2	90235298	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	89512698	89512714	protein_coding	Anks1b	exon	ENSMUSG00000058589	ProperStrand	68	1	-4.2245
chr19	46153197	46153217	protein_coding	Nolc1	exon	ENSMUSG00000015176	ProperStrand	53	chr18	42734287	42734368	protein_coding	Tcerg1	exon	ENSMUSG00000024498	ProperStrand	210	1	-11.0508
chr7	52309977	52309993	protein_coding	Prrg2	exon	ENSMUSG00000007837	NonProperStrand	281	chr4	137097398	137097434	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	1	-5.0641
chr5	34674540	34674574	LTR	RMER17C-int	ERVK	chr5RMER17C-int34674443	ProperStrand	1	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-inf
chr11	33745818	33745834	protein_coding	Kcnip1	intron	ENSMUSG00000053519	ProperStrand	45	chr4	131865856	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-3.9969
chr17	88069558	88069648	LTR	RMER17C	ERVK	chr17RMER17C88069465	NonProperStrand	1	chr17	88069812	88069902	SINE	RSINE1	B4	chr17RSINE188069821	ProperStrand	1	1	-inf
chr19	53461017	53461034	protein_coding	Smndc1	intron	ENSMUSG00000025024	NonProperStrand	12	chr16	23109027	23109072	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-10.5507
chr10	126975764	126975811	protein_coding	Lrp1	utr3	ENSMUSG00000040249	ProperStrand	151	chr10	107269895	107269914	protein_coding	Otogl	intron	ENSMUSG00000091455	NonProperStrand	8	1	-15.5843
chr7	149170855	149171340	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	chr19	8798501	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-3.2701
chr9	44143848	44143915	protein_coding	H2afx	utr3	ENSMUSG00000049932	ProperStrand	137	chr2	158182156	158182194	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-3.4441
chr2	129998665	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr4	116862547	116862637	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	1	-3.7639
chr5	115940326	115940384	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	chr15	98350193	98350283	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-0.9314
chr11	15212155	15212171	LINE	Lx	L1	chr11Lx15211662	ProperStrand	54	chr7	116663711	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.6939
chr1	182516007	182516073	protein_coding	Parp1	exon	ENSMUSG00000026496	ProperStrand	227	chr16	56035910	56036000	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	1	-6.3019
chr9	95525011	95525035	antisense	Gm16126	.	ENSMUSG00000086585	NonProperStrand	229	chr7	51505506	51505571	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	2	-9.9275
chr5	118477951	118477967	protein_coding	Tesc	exon	ENSMUSG00000029359	ProperStrand	114	chr11	62416951	62416976	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-4.7937
chr19	47888867	47888885	protein_coding	Wdr96	intron	ENSMUSG00000044948	NonProperStrand	11	chr10	23505555	23505626	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-11.0033
chr7	52582854	52582944	protein_coding	Trpm4	intron	ENSMUSG00000038260	ProperStrand	161	chr4	122968597	122968677	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-4.3661
chr11	3589093	3589146	protein_coding	Morc2a	utr3	ENSMUSG00000034543	ProperStrand	62	chr11	62416962	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	3	-13.7764
mmu-miR-3535	0	26	miRNA	mmu-miR-3535	.	mmu-miR-3535	ProperStrand	15	chr2	26494708	26494800	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-9.4881
chr2	153227447	153227525	protein_coding	Asxl1	exon	ENSMUSG00000042548	ProperStrand	76	chr18	35716811	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.7907
chr5	21850126	21850142	protein_coding	Reln	exon	ENSMUSG00000042453	NonProperStrand	7	chr9	15130707	15130812	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	1	-13.6357
chr3	34549108	34549962	protein_coding	Sox2	exon	ENSMUSG00000074637	ProperStrand	299	chr7	116664806	116664889	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-0.9055
chr8	59990704	59992238	protein_coding	Hmgb2	exon	ENSMUSG00000054717	ProperStrand	184	chr16	23111370	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-0.9050
chr3	137849424	137849440	protein_coding	4930579F01Rik	utr5	ENSMUSG00000012042	NonProperStrand	156	chr16	64780814	64780831	protein_coding	Zfp654	utr3	ENSMUSG00000047141	NonProperStrand	1	1	-inf
chr5	29917355	29917423	protein_coding	Ube3c	exon	ENSMUSG00000039000	ProperStrand	48	chr19	8799053	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	3	-14.3882
chr11	106648273	106648360	protein_coding	Ddx5	exon	ENSMUSG00000020719	ProperStrand	181	chr19	8963082	8963172	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-0.7173
chr2	22444421	22444462	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	chr19	8798513	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-1.3715
chr1	152268927	152269668	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	chr7	29689697	29690296	protein_coding	Actn4	exon	ENSMUSG00000054808	ProperStrand	120	1	-7.5245
chr4	131908687	131908720	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	chr17	71980620	71980637	snoRNA	ENSMUSG00000093289_Snord92	.	ENSMUSG00000093289	ProperStrand	56	1	-1.3189
chr8	59991434	59991450	protein_coding	Hmgb2	exon	ENSMUSG00000054717	NonProperStrand	96	chr4	3762255	3762293	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	1	-8.5474
chr12	3992956	3992973	protein_coding	Efr3b	exon	ENSMUSG00000020658	NonProperStrand	6	chr19	8963092	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-6.7266
chr16	96378134	96378191	protein_coding	Wrb	utr3	ENSMUSG00000023147	ProperStrand	30	chr10	110918572	110918662	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-4.7609
chr11	120148960	120148976	protein_coding	Bahcc1	exon	ENSMUSG00000039741	NonProperStrand	268	chr13	51743579	51743597	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-3.9609
chr5	148290987	148291077	protein_coding	Pan3	intron	ENSMUSG00000029647	ProperStrand	57	chr11	97642975	97643055	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.5597
chr16	90086486	90086586	protein_coding	Tiam1	intron	ENSMUSG00000002489	ProperStrand	80	chr12	17553035	17553091	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-4.5352
chr19	48572823	48572841	protein_coding	Sorcs3	intron	ENSMUSG00000063434	NonProperStrand	43	chr5	121655016	121655065	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.3767
chr4	43505656	43505723	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr15	82984326	82984426	protein_coding	Cyb5r3	utr3	ENSMUSG00000018042	ProperStrand	22	6	-21.0317
chr11	78150285	78150301	protein_coding	Pigs	exon	ENSMUSG00000041958	NonProperStrand	138	chr7	29136528	29136581	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.1039
chr14	32983861	32983951	protein_coding	Ncoa4	utr5	ENSMUSG00000056234	ProperStrand	15	chr17	24856619	24856699	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-9.2228
chr4	129322651	129322713	protein_coding	Kpna6	utr3	ENSMUSG00000003731	ProperStrand	39	chr10	23505152	23505179	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.8710
chr6	108778692	108778708	protein_coding	Edem1	utr5	ENSMUSG00000030104	ProperStrand	18	chr4	131908241	131908297	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.4481
chr4	126703409	126703426	protein_coding	Sfpq	exon	ENSMUSG00000028820	ProperStrand	340	chr8	46334012	46334105	protein_coding	F11	exon	ENSMUSG00000031645	ProperStrand	21	1	-11.9648
chr12	88778655	88778745	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	chr7	52382256	52382315	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-1.8655
chr9	114299618	114299692	protein_coding	Crtap	exon	ENSMUSG00000032431	ProperStrand	15	chr8	32260335	32260358	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-7.3814
chr4	83120285	83122274	protein_coding	Psip1	exon	ENSMUSG00000028484	ProperStrand	104	chr16	94354693	94354773	protein_coding	Hlcs	exon	ENSMUSG00000040820	ProperStrand	22	1	-14.2493
chr4	142725892	142725982	protein_coding	Prdm2	exon	ENSMUSG00000057637	ProperStrand	46	chr16	23110912	23110993	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-5.9621
chr19	44377582	44377642	protein_coding	Scd2	exon	ENSMUSG00000025203	ProperStrand	219	chr5	92485129	92485219	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	1	-6.1695
chr5	93612355	93612445	protein_coding	Ccni	exon	ENSMUSG00000063015	ProperStrand	43	chr7	109143947	109144032	protein_coding	Numa1	exon	ENSMUSG00000066306	ProperStrand	148	1	-12.1740
chr11	100581379	100581396	protein_coding	Rab5c	utr5	ENSMUSG00000019173	ProperStrand	76	chr8	74993850	74993889	protein_coding	Cherp	exon	ENSMUSG00000052488	ProperStrand	43	1	-13.5126
mmu-miR-291a-3p	0	22	miRNA	mmu-miR-291a-3p	.	mmu-miR-291a-3p	ProperStrand	19	chr5	121655017	121655117	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.9783
chr18	77279650	77279725	protein_coding	Katnal2	intron	ENSMUSG00000025420	NonProperStrand	9	chr19	8799831	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	3	-19.0401
chr2	90235305	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	50450101	50450118	protein_coding	Gpr125	utr5	ENSMUSG00000029090	NonProperStrand	25	1	-6.1754
chr3	23326181	23326197	LTR	RLTR9D	ERVK	chr3RLTR9D23325954	ProperStrand	21	chr5	118711148	118711221	protein_coding	2410131K14Rik	utr3	ENSMUSG00000032840	ProperStrand	6	1	-18.9453
chr17	28144598	28144674	protein_coding-noncoding	Anks1	utr5	ENSMUSG00000024219	ProperStrand	1	chr9	64023712	64023746	snoRNA	ENSMUSG00000064918_SNORD18	.	ENSMUSG00000064918	ProperStrand	370	1	-inf
chr11	90740823	90740913	lincRNA	4930405D11Rik	intron	ENSMUSG00000085940	NonProperStrand	2	chr11	90751130	90751210	lincRNA	4930405D11Rik	intron	ENSMUSG00000085940	ProperStrand	1	1	-inf
chr18	44577412	44577502	protein_coding	Dcp2	utr3	ENSMUSG00000024472	ProperStrand	44	chr8	13876100	13876180	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-7.7631
chr11	74991649	74991666	protein_coding	Dph1	utr3	ENSMUSG00000078789	NonProperStrand	8	chr16	23110969	23111000	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.2180
chr9	109991136	109993934	protein_coding	Dhx30	exon	ENSMUSG00000032480	ProperStrand	29	chr1	162965981	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-4.9889
chr18	36927846	36929740	protein_coding	Hars	exon	ENSMUSG00000001380	ProperStrand	23	chr17	24857795	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.0279
chr6	83059830	83059847	protein_coding	Mrpl53	utr3	ENSMUSG00000030037	ProperStrand	13	chr11	72258258	72258369	protein_coding	Mybbp1a	exon	ENSMUSG00000040463	ProperStrand	279	1	-13.3497
chr1	155287315	155287355	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	chr17	35087891	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-1.3935
chr2	79132657	79132674	protein_coding-noncoding	Itga4	utr5	ENSMUSG00000027009	NonProperStrand	118	chr4	131865854	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.7083
chr4	43505816	43505896	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr9	14363032	14366588	protein_coding	Amotl1	exon	ENSMUSG00000013076	ProperStrand	72	1	-2.7472
chr19	4192874	4193109	protein_coding	Ppp1ca	exon	ENSMUSG00000040385	ProperStrand	40	chr10	23505156	23505236	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.8310
chr4	128404890	128404908	protein_coding	Phc2	utr5	ENSMUSG00000028796	ProperStrand	14	chr3	153574574	153574634	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	2	-19.1181
chr8	13416895	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr10	90581026	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	6	-2.0235
chr2	25100692	25100807	protein_coding	Ndor1	utr3	ENSMUSG00000006471	ProperStrand	8	chr11	62951997	62952014	protein_coding	Pmp22	intron	ENSMUSG00000018217	NonProperStrand	40	2	-20.7926
mmu-miR-1195	3	19	miRNA	mmu-miR-1195	.	mmu-miR-1195	ProperStrand	13	chr4	131908685	131908726	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.8088
chr3	101396417	101396494	protein_coding	Atp1a1	exon	ENSMUSG00000033161	ProperStrand	316	chr5	121655028	121655118	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-1.0405
chr7	52234091	52234134	protein_coding	Prmt1	exon	ENSMUSG00000052429	ProperStrand	21	chr2	130101258	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-8.6995
chr13	76194348	76194364	protein_coding	Gpr150	utr5	ENSMUSG00000045509	NonProperStrand	63	chr7	29136525	29136586	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.2829
chr4	43505781	43505861	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr2	173059278	173059368	protein_coding	Pmepa1	intron	ENSMUSG00000038400	ProperStrand	25	1	-4.7144
chr16	57391759	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	1	-2.8112
chr2	120389450	120389540	protein_coding	Zfp106	utr5	ENSMUSG00000027288	ProperStrand	199	chr17	13112498	13112578	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-2.3980
chr13	9833553	9833667	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr8	63408014	63408044	protein_coding	Clcn3	exon	ENSMUSG00000004319	ProperStrand	93	2	-6.8963
chr11	115474008	115474025	protein_coding	Mif4gd	intron	ENSMUSG00000020743	NonProperStrand	6	chr11	6428060	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-7.7732
chr1	56907122	56907139	protein_coding	Satb2	exon	ENSMUSG00000038331	NonProperStrand	24	chr16	23111447	23111505	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.7195
chr19	38042839	38042939	protein_coding	Myof	exon	ENSMUSG00000048612	ProperStrand	37	chr7	116663738	116663767	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.3721
chr4	132530097	132530117	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	chr1	72871178	72871278	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	1	-5.8069
chr10	77060495	77060572	protein_coding	Pttg1ip	utr3	ENSMUSG00000009291	ProperStrand	28	chr1	139976731	139976747	protein_coding	Ptprc	exon	ENSMUSG00000026395	ProperStrand	27	1	-16.4796
chr11	14961829	14961849	LINE	Lx	L1	chr11Lx14961726	ProperStrand	93	chr2	26494782	26494829	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.3434
chr18	73693112	73693146	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr17	13115655	13115766	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	1	-0.6945
chr16	10174652	10174685	protein_coding	Rpl39l	utr3	ENSMUSG00000039209	ProperStrand	2	chr4	131865930	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-inf
chr11	50108406	50125280	protein_coding	Canx	utr5	ENSMUSG00000020368	ProperStrand	296	chr4	131908236	131908343	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	6	-1.6845
chr16	57391760	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr5	74489575	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	10	-6.5303
chr17	13110698	13110726	protein_coding	Tcp1	exon	ENSMUSG00000068039	ProperStrand	116	chr4	122970401	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-6.1100
chr8	72829630	72830446	protein_coding	Cope	exon	ENSMUSG00000055681	ProperStrand	11	chr4	131866155	131866245	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-7.0035
chr10	80641711	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	chr11	98878344	98878445	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-1.1693
chr14	27488817	27488843	protein_coding	Pde12	exon	ENSMUSG00000043702	ProperStrand	6	chr5	130300448	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	6	-inf
chr9	119820210	119829753	protein_coding	Wdr48	exon	ENSMUSG00000032512	ProperStrand	16	chr7	116664845	116664925	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-8.3496
chr14	59845215	59845282	protein_coding	Rcbtb1	exon	ENSMUSG00000035469	ProperStrand	39	chr7	117189863	117189929	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	2	-11.3783
chr7	35030278	35030348	protein_coding	4931406P16Rik	exon	ENSMUSG00000066571	ProperStrand	75	chr11	69483190	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	6	-12.7425
chr5	74489202	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr18	63109676	63109692	protein_coding	Apcdd1	exon	ENSMUSG00000071847	NonProperStrand	254	1	-2.9096
chr17	69737985	69738004	protein_coding	Zfp161	utr3	ENSMUSG00000049672	NonProperStrand	45	chr16	23110455	23110518	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-7.6189
chr14	64829132	64829149	protein_coding	Msra	intron	ENSMUSG00000054733	NonProperStrand	84	chr16	23111447	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.8324
chr10	116792791	116792813	protein_coding	Cpsf6	intron	ENSMUSG00000055531	ProperStrand	86	chr19	8963090	8963173	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.6982
chr1	183047793	183050550	protein_coding	Nvl	exon	ENSMUSG00000026516	ProperStrand	89	chr11	97642952	97643008	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	7	-14.1801
chr4	140872644	140872807	protein_coding	Epha2	exon	ENSMUSG00000006445	ProperStrand	148	chr7	29136636	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-2.0020
chr13	49748847	49748863	protein_coding	Nol8	intron	ENSMUSG00000021392	ProperStrand	39	chr10	11063464	11063480	protein_coding	Epm2a	exon	ENSMUSG00000055493	ProperStrand	28	1	-15.7049
chr4	4673362	4673442	LTR	IAPLTR3-int	ERVK	chr4IAPLTR3-int4672334	NonProperStrand	1	chr4	6140718	6140807	protein_coding	Ubxn2b	intron	ENSMUSG00000028243	ProperStrand	7	1	-inf
chr18	12692470	12692487	protein_coding	Lama3	exon	ENSMUSG00000024421	ProperStrand	20	chr16	23110457	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	11	-19.6682
chr17	23945434	23960995	protein_coding	Srrm2	utr5	ENSMUSG00000039218	ProperStrand	521	chr19	8799835	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	2	-2.3359
chr7	28586491	28586581	LTR	RMER6B	ERVK	chr7RMER6B28586455	ProperStrand	1	chr7	28586367	28586457	SINE	B2_Mm2	B2	chr7B2_Mm228586284	NonProperStrand	1	1	-inf
chr7	125505060	125505078	SINE	B4A	B4	chr7B4A125504878	NonProperStrand	1	chr12	113044614	113044666	protein_coding	Klc1	utr3	ENSMUSG00000021288	ProperStrand	35	1	-inf
chr15	11322856	11322872	protein_coding	Tars	intron	ENSMUSG00000022241	ProperStrand	121	chr19	8800407	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-2.2929
chr7	14458566	14458582	LINE	Lx3_Mus	L1	chr7Lx3_Mus14457463	NonProperStrand	5	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-16.8426
chr9	44630893	44630909	protein_coding	Mll1	exon	ENSMUSG00000002028	NonProperStrand	26	chr7	30029455	30029495	protein_coding	Yif1b	exon	ENSMUSG00000030588	ProperStrand	154	1	-13.1147
chr11	5180669	5180685	protein_coding	Znrf3	utr3	ENSMUSG00000041961	NonProperStrand	210	chr11	62416605	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-2.8310
chr5	118651305	118651322	protein_coding	Rnft2	intron	ENSMUSG00000032850	NonProperStrand	3	chr5	115939536	115939588	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-14.2250
chr3	123210867	123210967	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	chr13	23618322	23618359	tRNA	tRNA948-ArgTCG	.	849934	ProperStrand	26	2	-6.0485
chr6	28824929	28825009	protein_coding	Snd1	exon	ENSMUSG00000001424	ProperStrand	210	chr8	26883767	26883783	protein_coding	Bag4	intron	ENSMUSG00000037316	NonProperStrand	14	1	-13.7692
chrX	91435868	91435958	protein_coding	Eif2s3x	utr3	ENSMUSG00000035150	ProperStrand	55	chr1	89673646	89673726	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-3.4222
chr9	65478504	65478604	protein_coding	Rbpms2	utr5	ENSMUSG00000032387	ProperStrand	85	chr19	8799856	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-4.2796
chr1	163026615	163026695	protein_coding-noncoding	Klhl20	utr3	ENSMUSG00000026705	NonProperStrand	1	chr1	163020525	163020615	protein_coding	Klhl20	utr3	ENSMUSG00000026705	NonProperStrand	3	1	-inf
chr18	63109676	63109692	protein_coding	Apcdd1	exon	ENSMUSG00000071847	NonProperStrand	254	chr11	62416621	62416639	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-2.5023
chrX	67458741	67458757	LINE	Lx8	L1	chrXLx867458264	NonProperStrand	35	chr17	11032987	11033003	protein_coding	Pacrg	utr5	ENSMUSG00000037196	NonProperStrand	6	1	-18.4708
chr16	85802546	85802564	protein_coding	Adamts1	exon	ENSMUSG00000022893	ProperStrand	102	chr11	120148960	120148976	protein_coding	Bahcc1	exon	ENSMUSG00000039741	NonProperStrand	268	2	-14.6371
chr8	73032247	73032337	protein_coding	2810422J05Rik	exon	ENSMUSG00000055553	ProperStrand	171	chr5	108333581	108333661	snoRNA	ENSMUSG00000064453_Snord21	.	ENSMUSG00000064453	ProperStrand	201	1	-8.7904
chr4	116183283	116183353	protein_coding	Ipp	exon	ENSMUSG00000028696	ProperStrand	17	chr8	98269959	98270027	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-8.0638
chrX	12324673	12325049	protein_coding	Med14	exon	ENSMUSG00000064127	ProperStrand	4	chr19	8799612	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-12.4240
chr4	14879985	14880001	protein_coding	Necab1	utr3	ENSMUSG00000040536	ProperStrand	4	chr10	75504181	75504281	protein_coding	Zfp280b	utr3	ENSMUSG00000049764	ProperStrand	25	1	-19.1451
chr4	64224353	64224372	SINE	B4A	B4	chr4B4A64224348	ProperStrand	2	chr9	119295441	119297872	protein_coding	Xylb	exon	ENSMUSG00000035769	NonProperStrand	11	2	-inf
chr5	115939523	115939613	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr7	116663634	116663714	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	11	-2.7777
chr2	90235287	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	8800084	8800147	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	11	-10.2267
chr2	26493410	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr14	79980170	79980186	protein_coding	Elf1	exon	ENSMUSG00000036461	NonProperStrand	17	3	-20.6293
chr7	52382776	52382859	protein_coding	Rpl13a	intron	ENSMUSG00000074129	ProperStrand	269	chr7	52382751	52382799	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	6	-18.5971
chr2	130102806	130103239	protein_coding	Nop56	exon	ENSMUSG00000027405	ProperStrand	125	chr7	150717335	150717415	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-4.0968
chr5	138609996	138610072	protein_coding-noncoding	Mcm7	utr3	ENSMUSG00000029730	ProperStrand	1	chr8	129468746	129468764	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-inf
chr6	29161967	29161985	protein_coding	Impdh1	intron	ENSMUSG00000003500	NonProperStrand	22	chr19	8963153	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.0882
chr8	74204371	74204540	protein_coding	Jak3	exon	ENSMUSG00000031805	ProperStrand	24	chr4	131908809	131908874	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.6746
chr7	52161211	52161453	protein_coding	Ap2a1	exon	ENSMUSG00000060279	ProperStrand	193	chr4	131865413	131865855	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-1.9473
chr7	51503448	51503526	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	chr1	162967137	162967178	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	4	-13.1271
chr1	129271757	129271796	snoRNA	ENSMUSG00000065687_snoU6-53	.	ENSMUSG00000065687	ProperStrand	78	chr17	71980651	71980704	snoRNA	ENSMUSG00000093289_Snord92	.	ENSMUSG00000093289	ProperStrand	56	5	-19.8672
chr14	51427118	51427220	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr1	9932597	9932625	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-1.9950
chr5	130295414	130295552	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	chr17	35087894	35087947	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	10	-2.8348
chr6	33334629	33334645	protein_coding	Exoc4	intron	ENSMUSG00000029763	ProperStrand	120	chr1	72871407	72871465	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	1	-8.0975
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	108227635	108227719	protein_coding	E130303B06Rik	utr3	ENSMUSG00000013155	ProperStrand	3	2	-17.9085
chr12	17555182	17555372	protein_coding	Odc1	exon	ENSMUSG00000011179	ProperStrand	173	chr17	39985615	39985660	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-3.8966
chr12	85071526	85071562	protein_coding	Psen1	exon	ENSMUSG00000019969	ProperStrand	20	chr2	130103434	130103500	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	2	-16.2537
chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	chr4	6381315	6381333	protein_coding	Nsmaf	utr5	ENSMUSG00000028245	ProperStrand	15	1	-12.6937
chr13	13578959	13581300	protein_coding	Nid1	exon	ENSMUSG00000005397	ProperStrand	112	chr13	49779768	49779804	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-5.7823
chr19	46156037	46156101	protein_coding	Nolc1	exon	ENSMUSG00000015176	ProperStrand	53	chr11	97642961	97643051	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.6858
chr7	148634670	148637050	protein_coding	Rplp2	intron	ENSMUSG00000025508	ProperStrand	106	chr11	69483188	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	6	-10.4543
chr2	162760197	162760266	protein_coding	Srsf6	exon	ENSMUSG00000016921	ProperStrand	30	chr5	77738902	77738918	protein_coding	Noa1	exon	ENSMUSG00000036285	ProperStrand	147	1	-12.9171
mmu-miR-6240	4	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr2	152529754	152529770	protein_coding	H13	exon	ENSMUSG00000019188	NonProperStrand	16	1	-8.5577
chr4	94035002	94035021	lincRNA	Gm12648	intron	ENSMUSG00000085931	NonProperStrand	4	chr4	131865855	131865946	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.0048
chr11	3859482	3859512	protein_coding	4930556J24Rik	intron	ENSMUSG00000034493	NonProperStrand	1	chr13	30338190	30338207	protein_coding	Mboat1	utr3	ENSMUSG00000038732	NonProperStrand	148	1	-inf
chr5	148113281	148113297	protein_coding	Cdx2	utr3	ENSMUSG00000029646	ProperStrand	276	chr6	125136422	125136463	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	1	-3.5137
chr6	66488998	66489823	protein_coding	Mad2l1	exon	ENSMUSG00000029910	ProperStrand	7	chr6	111517076	111517092	protein_coding	Grm7	utr3	ENSMUSG00000056755	NonProperStrand	19	1	-19.8654
chr17	34174969	34174994	protein_coding	Rxrb	utr3	ENSMUSG00000039656	ProperStrand	34	chr5	130300500	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-8.8223
chr12	87156921	87156953	protein_coding	0610007P14Rik	utr3	ENSMUSG00000021252	ProperStrand	42	chr19	8963087	8963124	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.8907
chr8	122099332	122099349	protein_coding	Lrrc50	exon	ENSMUSG00000031831	ProperStrand	5	chrX	84483731	84483762	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-13.4112
chr11	29607843	29607887	protein_coding	Rtn4	exon	ENSMUSG00000020458	ProperStrand	117	chr12	102297023	102297040	protein_coding	Smek1	exon	ENSMUSG00000041846	ProperStrand	66	1	-11.7803
chr4	117558946	117558963	protein_coding	Atp6v0b	exon	ENSMUSG00000033379	NonProperStrand	5	chr10	39978350	39978485	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	2	-16.8994
chr7	117189970	117190060	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	chr5	92485110	92485193	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	21	-inf
chr12	88778631	88778731	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	chr2	32818862	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	3	-1.0998
chr11	62416583	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	chr6	71832603	71832687	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	6	-1.2291
chr8	87366737	87366898	protein_coding	Calr	exon	ENSMUSG00000003814	ProperStrand	232	chr15	79116786	79116826	protein_coding	Pla2g6	utr3	ENSMUSG00000042632	ProperStrand	32	2	-18.2893
chr3	41471096	41475315	protein_coding	Sclt1	exon	ENSMUSG00000059834	ProperStrand	16	chr2	130101991	130102081	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	12	-20.0740
chr19	27292235	27292251	protein_coding	Vldlr	intron	ENSMUSG00000024924	NonProperStrand	36	chr10	127521199	127521235	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	1	-9.8223
chr10	18320340	18320356	protein_coding	D10Bwg1379e	exon	ENSMUSG00000019852	NonProperStrand	120	chr14	20621771	20622316	protein_coding	Nid2	exon	ENSMUSG00000021806	ProperStrand	372	1	-8.2713
chr5	34103534	34104270	protein_coding	Letm1	exon	ENSMUSG00000005299	ProperStrand	21	chr7	117166796	117166858	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-6.8899
chr19	46139562	46139603	protein_coding	Pprc1	exon	ENSMUSG00000055491	ProperStrand	143	chr7	116664854	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.2002
chr4	130224880	130224980	protein_coding	Pum1	exon	ENSMUSG00000028580	ProperStrand	131	chr19	8799836	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-3.4731
chr9	96512383	96512400	protein_coding	Rasa2	intron	ENSMUSG00000032413	ProperStrand	11	chr11	97643012	97643038	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-5.6855
chr11	118346212	118346477	protein_coding	Engase	exon	ENSMUSG00000033857	ProperStrand	12	chr10	5989195	5989275	protein_coding	Akap12	utr3	ENSMUSG00000038587	ProperStrand	1008	1	-10.9482
chr13	42805210	43051992	protein_coding	Phactr1	exon	ENSMUSG00000054728	ProperStrand	12	chr16	23110455	23110475	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.4970
chr9	121662196	121663364	protein_coding	Nktr	exon	ENSMUSG00000032525	ProperStrand	41	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	2	-10.6698
chr9	120037943	120038050	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	chr2	26768086	26768119	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	1	-0.7037
chr18	10052132	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr9	63042015	63042031	protein_coding	Map2k5	exon	ENSMUSG00000058444	ProperStrand	193	1	-6.4785
chr17	37210840	37210932	protein_coding	Gabbr1	utr3	ENSMUSG00000024462	ProperStrand	27	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.7840
chr2	92851340	92851362	protein_coding-noncoding	Prdm11	utr3	ENSMUSG00000075028	ProperStrand	3	chr10	23506278	23506323	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	3	-inf
chr12	112779174	112779255	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	chr10	107800760	107800850	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	18	-21.6958
chr1	120948361	120948378	protein_coding	Gli2	intron	ENSMUSG00000048402	NonProperStrand	14	chr19	8963087	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.9719
chr5	143510894	143510984	LTR	RLTR20D	ERVK	chr5RLTR20D143510649	NonProperStrand	1	chr16	23110456	23110536	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-inf
chr9	44143848	44143915	protein_coding	H2afx	utr3	ENSMUSG00000049932	ProperStrand	137	chr13	51743668	51743703	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	4	-16.1430
chr4	64850421	64850438	protein_coding	Pappa	exon	ENSMUSG00000028370	ProperStrand	65	chr2	26494764	26494827	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.9637
chr1	55064424	55064524	protein_coding	Sf3b1	exon	ENSMUSG00000025982	ProperStrand	158	chr15	34370545	34370606	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-1.8774
chr11	94867724	94867797	protein_coding	Ppp1r9b	utr3	ENSMUSG00000038976	ProperStrand	27	chr7	51505224	51505282	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	1	-9.7604
chr8	119983489	119983506	protein_coding	4933407C03Rik	utr3	ENSMUSG00000034390	NonProperStrand	32	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	2	-14.2988
chr15	36538235	36538325	protein_coding	Pabpc1	utr5	ENSMUSG00000022283	ProperStrand	908	chr3	95980313	95980393	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	3	-5.1124
chrX	156022676	156022715	protein_coding	A830080D01Rik	intron	ENSMUSG00000044150	ProperStrand	102	chr5	130300479	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	4	-6.6171
chr14	74772457	74772547	LTR	MTD-int	MaLR	chr14MTD-int74772410	NonProperStrand	1	chr14	74772065	74772155	LTR	MTD	MaLR	chr14MTD74772006	NonProperStrand	1	1	-inf
chr6	71371559	71371578	protein_coding	Rmnd5a	intron	ENSMUSG00000002222	ProperStrand	38	chr15	101114855	101114962	protein_coding	9430023L20Rik	utr5	ENSMUSG00000037204	ProperStrand	11	2	-19.5835
chr9	75293512	75293612	protein_coding	Leo1	exon	ENSMUSG00000042487	ProperStrand	5	chr6	70805529	70805577	snoRNA	ENSMUSG00000065750_SNORA5	.	ENSMUSG00000065750	ProperStrand	165	1	-16.3967
chr2	26085594	26085648	protein_coding	Qsox2	intron	ENSMUSG00000036327	ProperStrand	24	chr6	115758041	115758131	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-7.2924
chr11	69037669	69037685	protein_coding	Gucy2e	exon	ENSMUSG00000020890	NonProperStrand	99	chr9	65221577	65221636	protein_coding	Gm514	exon	ENSMUSG00000086228	ProperStrand	8	2	-19.4582
chr15	12086043	12086073	protein_coding	Zfr	exon	ENSMUSG00000022201	ProperStrand	48	chr9	15069885	15069901	protein_coding	Med17	exon	ENSMUSG00000031935	ProperStrand	135	1	-12.1353
chr6	122662719	122663191	protein_coding	Nanog	exon	ENSMUSG00000012396	ProperStrand	66	chr16	23111430	23111449	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.1306
chr17	57144113	57144175	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	ProperStrand	29	chr16	23111452	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.3903
chr2	30882371	30982111	protein_coding	Fnbp1	utr3	ENSMUSG00000075415	ProperStrand	53	chr4	131908358	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-6.5361
chr7	128028236	128028950	protein_coding	Eef2k	exon	ENSMUSG00000035064	ProperStrand	27	chr15	34370545	34370607	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-5.0720
chr4	122968617	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	chr7	88674800	88674870	snoRNA	ENSMUSG00000093107_AC167122.1	.	ENSMUSG00000093107	ProperStrand	110	1	-5.0956
chr10	80644903	80644927	protein_coding	Eef2	utr3	ENSMUSG00000034994	ProperStrand	2244	chr4	155553694	155569377	protein_coding	Agrn	exon	ENSMUSG00000041936	ProperStrand	175	8	-18.8108
chrX	99381904	99382710	protein_coding	Rps4x	exon	ENSMUSG00000031320	ProperStrand	139	chr11	97642952	97643038	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	4	-5.1889
chr9	65049531	65049621	snRNA	ENSMUSG00000075930_U5	.	ENSMUSG00000075930	ProperStrand	175	chr12	106269284	106269334	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	5	-10.6285
chr11	97888591	97888608	protein_coding	Rpl19	intron	ENSMUSG00000017404	NonProperStrand	9	chr16	23110828	23110892	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-5.3337
chr17	57162117	57162217	protein_coding	Khsrp	exon	ENSMUSG00000007670	ProperStrand	353	chr4	131866241	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-0.8520
chr2	90235301	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr15	58884095	58884113	protein_coding	Mtss1	intron	ENSMUSG00000022353	NonProperStrand	51	1	-4.7748
chr8	80041484	80041501	protein_coding	Arhgap10	intron	ENSMUSG00000037148	ProperStrand	58	chr7	29136525	29136573	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.4223
chr8	64017614	64028377	protein_coding	Palld	exon	ENSMUSG00000058056	NonProperStrand	125	chr8	32260335	32260437	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-3.2580
chr12	32011085	32011514	protein_coding	Lamb1	exon	ENSMUSG00000002900	ProperStrand	87	chr4	131865853	131865953	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-2.3621
chr16	17911269	17911340	protein_coding	Dgcr14	exon	ENSMUSG00000003527	ProperStrand	5	chr10	23505148	23505237	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-5.7809
chr5	115940360	115940406	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	chr18	74938046	74938155	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	ProperStrand	1022	1	-3.2410
chr4	140503596	140503613	protein_coding	Padi2	intron	ENSMUSG00000028927	ProperStrand	24	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-4.1579
chr6	34363553	34363653	protein_coding	Akr1b7	intron	ENSMUSG00000052131	NonProperStrand	2	chr9	120037909	120037931	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-12.0930
chr6	122681417	122681507	protein_coding	Slc2a3	exon	ENSMUSG00000003153	ProperStrand	682	chr11	45767597	45767630	protein_coding	Thg1l	exon	ENSMUSG00000011254	ProperStrand	19	1	-10.7784
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr2	103880824	103880914	snoRNA	ENSMUSG00000087739_SCARNA21	.	ENSMUSG00000087739	ProperStrand	50	2	-10.1619
chr4	141740991	141741083	protein_coding	Kazn	intron	ENSMUSG00000040606	ProperStrand	123	chr4	131865864	131865944	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	33	-inf
chr9	106798425	106798500	protein_coding	Dock3	intron	ENSMUSG00000039716	ProperStrand	24	chr16	23111416	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.7195
chr19	6335077	6335455	protein_coding	Men1	exon	ENSMUSG00000024947	NonProperStrand	4	chr17	35299507	35299639	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-10.3796
chr1	90161488	90161516	protein_coding	Hjurp	utr3	ENSMUSG00000044783	ProperStrand	110	chr16	23111691	23111781	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-3.2850
chr8	112363241	112363275	snoRNA	ENSMUSG00000077549_Snord71	.	ENSMUSG00000077549	ProperStrand	196	chr14	33005038	33005136	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-1.9156
chr8	87223365	87223527	protein_coding	Trmt1	exon	ENSMUSG00000001909	ProperStrand	88	chr4	85016349	85016365	protein_coding	Sh3gl2	intron	ENSMUSG00000028488	NonProperStrand	313	1	-9.2348
chr12	101153739	101153765	protein_coding	Tdp1	exon	ENSMUSG00000021177	ProperStrand	23	chr11	83107805	83107833	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	1	-10.7743
chr11	69464783	69464824	protein_coding	Fxr2	exon	ENSMUSG00000018765	ProperStrand	40	chr17	30355227	30355308	protein_coding	Btbd9	utr3	ENSMUSG00000062202	ProperStrand	31	1	-15.4532
chr11	77972442	77972532	protein_coding-noncoding	Traf4	utr3	ENSMUSG00000017386	ProperStrand	2	chr10	23505200	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-8.0476
chr19	22093934	22094014	LINE	Lx2B	L1	chr19Lx2B22093335	NonProperStrand	1	chr19	22094150	22094240	LTR	RMER13B	ERVK	chr19RMER13B22094011	ProperStrand	1	1	-inf
chr2	26494762	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	chr4	116828379	116828457	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	6	-2.2548
chr13	100204322	100204412	protein_coding	Mtap1b	utr3	ENSMUSG00000052727	ProperStrand	76	chr4	131866159	131866239	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-3.2317
chr11	119136228	119136244	protein_coding	Gaa	exon	ENSMUSG00000025579	NonProperStrand	201	chr11	77505723	77505798	protein_coding	Nufip2	exon	ENSMUSG00000037857	ProperStrand	36	1	-11.9199
chr13	21872198	21872298	protein_coding	Hist1h1b	exon	ENSMUSG00000058773	ProperStrand	65	chr7	66603051	66603103	snoRNA	ENSMUSG00000075885_SNORD115	.	ENSMUSG00000075885	ProperStrand	2	1	-inf
chr9	109936885	109936980	protein_coding	Mtap4	exon	ENSMUSG00000032479	ProperStrand	188	chr11	6428035	6428086	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.3267
chr7	56126106	56126196	protein_coding	E2f8	exon	ENSMUSG00000046179	ProperStrand	2	chr16	23110900	23110980	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr10	79520399	79520416	protein_coding	Sbno2	exon	ENSMUSG00000035673	NonProperStrand	11	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-11.1946
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr1	153276013	153276029	protein_coding	1190005F20Rik	exon	ENSMUSG00000053286	ProperStrand	5	1	-11.0331
mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr2	52527923	52527941	protein_coding	Cacnb4	intron	ENSMUSG00000017412	ProperStrand	14	2	-14.1173
chr6	83111671	83111687	protein_coding	1700003E16Rik	exon	ENSMUSG00000030030	ProperStrand	352	chr5	54389949	54389965	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	1	-7.2503
chr19	59064715	59064732	protein_coding	4930506M07Rik	exon	ENSMUSG00000041362	ProperStrand	36	chr19	8798743	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	3	-13.4624
chr5	90643997	90644037	protein_coding	Cox18	utr3	ENSMUSG00000035505	ProperStrand	2	chr4	131865913	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-8.7800
chr2	26493400	26493515	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr4	132530099	132530117	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	4	-9.4978
chr4	43505656	43505768	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr1	164640543	164640776	protein_coding	Prrc2c	exon	ENSMUSG00000040225	ProperStrand	413	2	-0.8682
chr9	4299367	4302483	protein_coding	Aasdhppt	exon	ENSMUSG00000025894	ProperStrand	121	chr7	117166721	117166806	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-3.4939
chr15	99843055	99843145	protein_coding	Larp4	utr3	ENSMUSG00000023025	ProperStrand	41	chr9	120037898	120037978	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-5.4456
chr18	42381261	42385421	protein_coding	Lars	exon	ENSMUSG00000024493	ProperStrand	69	chr3	123210854	123210882	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-3.3699
chr17	24837876	24837892	protein_coding	Tbl3	exon	ENSMUSG00000040688	ProperStrand	42	chr7	117189863	117189909	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-6.9170
chr13	9172089	9172116	protein_coding	Larp4b	utr3	ENSMUSG00000033499	ProperStrand	53	chr6	67233900	67234019	protein_coding	Serbp1	utr3	ENSMUSG00000036371	ProperStrand	261	3	-20.1352
chr1	130772505	130772595	Other	RMER1B	Other	chr1RMER1B130772350	ProperStrand	1	chrX	102252866	102252956	lincRNA	5530601H04Rik	intron	ENSMUSG00000087174	NonProperStrand	1	1	-inf
chr18	10052132	10052154	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr8	112963157	112963173	protein_coding	Hydin	intron	ENSMUSG00000059854	ProperStrand	47	1	-9.2915
chr1	94600714	94600731	LINE	L1MB8	L1	chr1L1MB894600394	ProperStrand	25	chr5	130300419	130300477	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.1053
chr5	30969300	30969316	protein_coding	Cenpa	utr5	ENSMUSG00000029177	ProperStrand	18	chrX	160396313	160396329	protein_coding	Zrsr2	utr5	ENSMUSG00000031370	ProperStrand	57	1	-15.8224
chr8	87385285	87388003	protein_coding	Farsa	exon	ENSMUSG00000003808	ProperStrand	21	chr16	23111777	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.7491
chr3	157204138	157204691	protein_coding	Zranb2	exon	ENSMUSG00000028180	ProperStrand	43	chr13	70743253	70743286	protein_coding	BC018507	exon	ENSMUSG00000034525	ProperStrand	43	1	-14.6677
chr2	65622233	65622254	LTR	BGLII	ERVK	chr2BGLII65622220	ProperStrand	1	chr2	146125209	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	1	-inf
chr11	70067503	70067520	protein_coding	Alox12	intron	ENSMUSG00000000320	ProperStrand	16	chr2	26494701	26494761	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.6366
chr10	20861834	20861850	protein_coding	Myb	exon	ENSMUSG00000019982	NonProperStrand	9	chr16	23110454	23110508	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-6.0870
chr7	13614474	13614564	protein_coding-noncoding	Trim28	utr5	ENSMUSG00000005566	ProperStrand	16	chr8	23123891	23123971	protein_coding	Atp7b	exon	ENSMUSG00000006567	ProperStrand	7	1	-inf
chr17	24857220	24857291	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr8	86552060	86552210	protein_coding	Palm3	exon	ENSMUSG00000047986	NonProperStrand	2	1	-17.1850
chr15	82958465	82959649	protein_coding	Poldip3	exon	ENSMUSG00000041815	ProperStrand	57	chr10	93756614	93756631	protein_coding	Gm4792	exon	ENSMUSG00000053420	ProperStrand	2	1	-inf
chr4	116826696	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	chr9	15119631	15119968	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	28	-11.3525
chr5	100855903	100855943	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr3	75331559	75331595	protein_coding	Pdcd10	exon	ENSMUSG00000027835	ProperStrand	10	1	-10.2809
chr15	76430261	76430436	protein_coding	Cpsf1	exon	ENSMUSG00000034022	ProperStrand	127	chr8	129468746	129468800	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-3.0258
chr8	35305116	35305135	SINE	RSINE1	B4	chr8RSINE135305062	ProperStrand	10	chr7	124692516	124692571	protein_coding	Xylt1	exon	ENSMUSG00000030657	ProperStrand	9	1	-19.9862
chr19	8894691	8894781	protein_coding	Hnrnpul2	utr5	ENSMUSG00000071659	ProperStrand	93	chr16	23111740	23111820	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.2531
chr2	126716381	126716412	protein_coding	2010106G01Rik	utr3	ENSMUSG00000027366	ProperStrand	7	chr2	26768050	26768119	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	3	-19.0945
chr2	91771018	91771118	protein_coding	Mdk	exon	ENSMUSG00000027239	ProperStrand	56	chr9	15118522	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	1	-9.4804
chr18	12314262	12314352	protein_coding	Riok3	utr3	ENSMUSG00000024404	ProperStrand	38	chr6	71832644	71832687	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-6.5128
chr1	172635167	172635220	protein_coding	Atf6	utr3	ENSMUSG00000026663	ProperStrand	35	chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	1	-9.8482
chr8	72287172	72287188	protein_coding	Zfp866	utr3	ENSMUSG00000043090	NonProperStrand	134	chr9	120039585	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.9381
chr9	56907762	56907821	protein_coding	Ptpn9	exon	ENSMUSG00000032290	ProperStrand	10	chr11	97641452	97641489	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	2	-18.1047
chr2	48760556	48760572	protein_coding	Orc4	utr3	ENSMUSG00000026761	ProperStrand	95	chr19	8799021	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-4.9378
chr7	38354919	38354935	protein_coding	Zfp536	exon	ENSMUSG00000043456	NonProperStrand	236	chr11	106362640	106362680	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-4.7219
chr3	92240863	92240882	protein_coding	Sprr1b	utr3	ENSMUSG00000048455	NonProperStrand	2	chr4	131865855	131865901	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-inf
chr16	4714575	4714619	protein_coding	Nmral1	exon	ENSMUSG00000063445	ProperStrand	10	chr16	23111389	23111505	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-10.9079
chr11	6302672	6302689	protein_coding	Zmiz2	intron	ENSMUSG00000041164	ProperStrand	69	chr19	8799829	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-4.6775
chr5	73488788	73489467	protein_coding	Fryl	exon	ENSMUSG00000070733	ProperStrand	173	chr18	35716782	35716862	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-1.4525
chr7	129311263	129312092	protein_coding	Plk1	exon	ENSMUSG00000030867	ProperStrand	146	chr18	75161108	75161173	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	1	-7.2481
chr1	164621355	164635130	protein_coding	Prrc2c	exon	ENSMUSG00000040225	ProperStrand	413	chr1	162965539	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-1.0462
chr11	116535915	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chrX	132333643	132333718	protein_coding	Gprasp1	exon	ENSMUSG00000043384	ProperStrand	57	1	-6.0116
chr7	87236788	87236866	protein_coding	Zfp710	utr3	ENSMUSG00000048897	ProperStrand	229	chr16	23111451	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-0.9807
chr16	22381508	22381591	protein_coding	Etv5	utr3	ENSMUSG00000013089	ProperStrand	88	chr16	23110986	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-1.2222
chr13	9833551	9833680	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr19	8799829	8799897	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	33	-21.6672
chrX	34622906	34623002	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	chr12	110923174	110923227	snoRNA	ENSMUSG00000084487_SNORD113	.	ENSMUSG00000084487	ProperStrand	183	2	-2.5565
chr9	72773679	72773695	protein_coding	Pygo1	utr5	ENSMUSG00000034910	NonProperStrand	2	chr16	23111382	23111443	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-8.0851
chr4	55431651	55431669	lincRNA	Gm12505	exon	ENSMUSG00000087070	ProperStrand	447	chr11	69481362	69481467	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-0.8588
chr18	42369777	42370820	protein_coding	Lars	exon	ENSMUSG00000024493	ProperStrand	69	chr18	35714159	35714249	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-5.4778
chr7	91395817	91395834	protein_coding	Arnt2	utr3	ENSMUSG00000015709	NonProperStrand	3	chr4	129662259	129662276	protein_coding	Bai2	utr5	ENSMUSG00000028782	ProperStrand	119	1	-18.6125
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr15	10504979	10504995	protein_coding	Rai14	exon	ENSMUSG00000022246	ProperStrand	180	1	-5.6254
chr11	55296262	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	chr15	98350144	98350235	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	8	-2.7406
chr7	127801171	127802557	protein_coding	Uqcrc2	exon	ENSMUSG00000030884	ProperStrand	26	chr16	20684360	20684386	snoRNA	ENSMUSG00000077239_Snord66	.	ENSMUSG00000077239	ProperStrand	159	1	-13.0505
chr8	37991138	37991154	protein_coding	Dlc1	intron	ENSMUSG00000031523	NonProperStrand	19	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7016
chr16	20156701	20156718	protein_coding	Yeats2	intron	ENSMUSG00000041215	NonProperStrand	23	chr16	23110468	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.2122
chr17	15806289	15806369	LTR	ORR1D1-int	MaLR	chr17ORR1D1-int15805667	ProperStrand	1	chr6	72894543	72894633	LTR	ORR1B1-int	MaLR	chr6ORR1B1-int72894263	ProperStrand	1	1	-inf
chr7	135048573	135048601	protein_coding	Bckdk	exon	ENSMUSG00000030802	ProperStrand	26	chr11	69483142	69483232	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.9646
chr17	24665415	24665438	antisense	2610019E17Rik	.	ENSMUSG00000093565	ProperStrand	24	chr16	30514154	30514171	protein_coding	Tmem44	utr3	ENSMUSG00000022537	ProperStrand	217	1	-12.5912
chr15	74347556	74347574	protein_coding	Bai1	intron	ENSMUSG00000034730	NonProperStrand	56	chr5	108334196	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-4.9533
chr15	76175264	76175316	protein_coding	Cyc1	exon	ENSMUSG00000022551	ProperStrand	47	chr7	29073210	29073330	protein_coding	BC089491	exon	ENSMUSG00000046750	ProperStrand	62	1	-13.7478
chr4	131742340	131761256	protein_coding	Ythdf2	exon	ENSMUSG00000040025	ProperStrand	15	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-10.9588
chr16	96391588	96391613	protein_coding	Lca5l	intron	ENSMUSG00000045275	NonProperStrand	210	chr7	111379261	111380360	protein_coding	Trim6	exon	ENSMUSG00000072244	ProperStrand	40	2	-18.6418
chr3	82816758	82816774	protein_coding	Fgg	exon	ENSMUSG00000033860	NonProperStrand	321	chr5	74489610	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-1.0414
chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	chr9	45198737	45198910	protein_coding	Fxyd6	exon	ENSMUSG00000066705	ProperStrand	30	1	-9.1208
chr13	24128419	24133555	protein_coding	Lrrc16a	exon	ENSMUSG00000021338	ProperStrand	12	chr7	29136522	29136612	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.3856
chr5	120121958	120130847	protein_coding	Tbx3	utr5	ENSMUSG00000018604	ProperStrand	87	chr16	23110908	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	11	-8.3716
chr12	88912986	88913005	protein_coding	Gm2022	intron	ENSMUSG00000071217	NonProperStrand	57	chr4	130305550	130305619	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	1	-10.0126
chr11	101120427	101120477	protein_coding	Vps25	utr3	ENSMUSG00000078656	ProperStrand	21	chr10	23505152	23505258	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-10.4379
chr11	84213461	84213561	protein_coding	Acaca	utr3	ENSMUSG00000020532	ProperStrand	100	chr16	23111757	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-2.2424
chr11	102299091	102299120	protein_coding	Fam171a2	exon	ENSMUSG00000034685	NonProperStrand	5	chr8	113362430	113362493	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	1	-14.4259
chr11	13081976	13081996	LINE	L1_Mus1	L1	chr11L1_Mus113081808	NonProperStrand	1	chr11	6428094	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-inf
chr15	102821146	102821164	protein_coding	Hoxc8	utr5	ENSMUSG00000001657	ProperStrand	1	chr2	70175913	70175931	protein_coding	Myo3b	intron	ENSMUSG00000042064	ProperStrand	8	1	-inf
chr14	45949538	45949554	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	chr14	31827613	31827643	protein_coding	Gnl3	intron	ENSMUSG00000042354	ProperStrand	53	1	-10.1714
chr2	90235296	90235346	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	5	-5.2875
chr7	29600369	29603504	protein_coding	Hnrnpl	exon	ENSMUSG00000015165	ProperStrand	150	chr8	129468808	129468876	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-2.7326
chr18	12172461	12172477	protein_coding	6030446N20Rik	intron	ENSMUSG00000049411	ProperStrand	235	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-1.3223
chr2	90235290	90235325	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr13	44998224	44998312	protein_coding	Jarid2	exon	ENSMUSG00000038518	ProperStrand	372	3	-3.9734
chr16	55904820	55904837	protein_coding	Cep97	utr3	ENSMUSG00000022604	ProperStrand	22	chr16	23110912	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.8207
chr9	120859716	120859787	protein_coding	Ctnnb1	exon	ENSMUSG00000006932	ProperStrand	214	chr7	17014359	17014377	protein_coding	Zc3h4	exon	ENSMUSG00000059273	ProperStrand	95	1	-9.8403
chr19	38146428	38146528	snoRNA	ENSMUSG00000064646_SNORA42	.	ENSMUSG00000064646	ProperStrand	37	chr17	24665446	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-5.8863
chr18	57104031	57104121	LTR	ORR1A2	MaLR	chr18ORR1A257103893	ProperStrand	1	chr18	57104242	57104322	LTR	ORR1E	MaLR	chr18ORR1E57104196	NonProperStrand	1	1	-inf
chr17	6943295	6951707	protein_coding	Ezr	utr3	ENSMUSG00000052397	ProperStrand	126	chr16	23110902	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	9	-3.3436
chr9	64024932	64024956	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	chr16	43886794	43886875	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	1	-4.0110
chr4	120843229	120843308	protein_coding	Rlf	exon	ENSMUSG00000049878	ProperStrand	58	chr19	8799844	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-5.0125
chr11	69234364	69234380	protein_coding	Dnahc2	utr3	ENSMUSG00000005237	ProperStrand	95	chr8	98253075	98253110	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	1	-9.0688
chr6	112689098	112689322	protein_coding	Srgap3	exon	ENSMUSG00000030257	NonProperStrand	208	chr11	48614368	48614434	snoRNA	ENSMUSG00000064500_SNORD95	.	ENSMUSG00000064500	ProperStrand	100	2	-15.4563
chr8	109061075	109062946	protein_coding	Cdh3	exon	ENSMUSG00000061048	ProperStrand	62	chr14	33005138	33005157	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	5	-16.2545
chr18	75161136	75161172	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	chr14	31827478	31827516	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-2.8633
chr3	138618324	138618340	protein_coding	Rap1gds1	exon	ENSMUSG00000028149	ProperStrand	16	chr12	112779147	112779192	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-7.4007
chr11	68882652	68882742	SINE	ID4	ID	chr11ID468882661	NonProperStrand	1	chr11	68882497	68882587	SINE	ID_B1	B4	chr11ID_B168882483	ProperStrand	1	1	-inf
chr11	106648236	106648337	protein_coding	Ddx5	exon	ENSMUSG00000020719	ProperStrand	181	chr1	162968489	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	13	-inf
chr4	124336183	124336223	protein_coding	Pou3f1	exon	ENSMUSG00000078236	ProperStrand	5	chr7	148634776	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-9.0363
chr9	119536351	119539207	protein_coding	Scn10a	exon	ENSMUSG00000034533	ProperStrand	37	chr19	8963027	8963085	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.1181
chr6	71915592	71915650	protein_coding	Polr1a	exon	ENSMUSG00000049553	ProperStrand	109	chr1	89673683	89673773	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-2.2235
chr7	19591412	19591428	protein_coding	Irf2bp1	exon	ENSMUSG00000044030	NonProperStrand	81	chr1	162965531	162965570	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.7409
chr2	128956292	128959023	protein_coding	Chchd5	exon	ENSMUSG00000037938	ProperStrand	4	chr5	106040860	106040877	protein_coding	Lrrc8c	utr3	ENSMUSG00000054720	NonProperStrand	12	1	-21.0614
chr1	162967115	162967143	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	chr3	108357301	108357391	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-0.7651
chr18	73751495	73751570	protein_coding	Mex3c	utr3	ENSMUSG00000037253	ProperStrand	17	chr6	64500839	64500859	protein_coding	Grid2	intron	ENSMUSG00000071424	NonProperStrand	76	4	-inf
chr10	126501739	126501932	protein_coding	Cdk4	exon	ENSMUSG00000006728	ProperStrand	47	chr8	32260335	32260362	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-5.1019
chr11	60854837	60854927	protein_coding	Kcnj12	intron	ENSMUSG00000042529	NonProperStrand	1	chr11	60687312	60687403	protein_coding	Tmem11	intron	ENSMUSG00000043284	NonProperStrand	5	1	-inf
chr6	115757988	115758131	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr9	120039533	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	27	-6.0391
chr17	79317744	79317766	protein_coding	1110001A16Rik	exon	ENSMUSG00000062691	ProperStrand	7	chr15	79908951	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	2	-15.7684
chr11	115996325	115996415	protein_coding	Mrpl38	exon	ENSMUSG00000020775	ProperStrand	25	chr10	39978351	39978431	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-7.1973
chr9	63868722	63868738	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	chrX	71517822	71517955	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-2.1484
chr19	10700470	10703645	protein_coding	Ddb1	utr3	ENSMUSG00000024740	ProperStrand	304	chr1	162967491	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	3	-2.9571
chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	chr1	162965981	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-1.9750
chr13	101551207	101551232	protein_coding	Ccnb1	exon	ENSMUSG00000041431	ProperStrand	39	chr4	131908236	131908293	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.0833
chr1	36849993	36850016	protein_coding	Tmem131	exon	ENSMUSG00000026116	ProperStrand	129	chr18	35716834	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.0395
chr18	46369859	46369921	protein_coding	Trim36	intron	ENSMUSG00000033949	ProperStrand	5	chr17	35087897	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-10.3095
chr12	110786502	110786592	lincRNA	Meg3	intron	ENSMUSG00000021268	ProperStrand	61	chr5	121655062	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.7168
chr4	41659646	41659701	protein_coding	2810432D09Rik	exon	ENSMUSG00000036114	ProperStrand	2	chr2	145077957	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-15.1878
chr2	164251563	164251619	protein_coding	Sdc4	utr3	ENSMUSG00000017009	ProperStrand	177	chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-4.3537
chr11	102294627	102294656	protein_coding	Grn	exon	ENSMUSG00000034708	ProperStrand	43	chr13	48974647	48974708	protein_coding	Fam120a	utr3	ENSMUSG00000038014	ProperStrand	76	3	-inf
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr8	74999076	74999093	protein_coding	Cherp	utr5	ENSMUSG00000052488	NonProperStrand	4	1	-12.6874
chr7	13615531	13615713	protein_coding	Trim28	exon	ENSMUSG00000005566	ProperStrand	296	chr18	33954915	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-0.9581
chr6	119910714	119912486	pseudogene	Wnk1	.	ENSMUSG00000089896	ProperStrand	4	chr16	23110967	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.6489
chr5	134861678	134864358	protein_coding	Gtf2ird1	exon	ENSMUSG00000023079	ProperStrand	85	chr1	88247742	88247783	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-4.4271
chr6	61060504	61060522	LTR	RMER12B	ERVK	chr6RMER12B61060296	NonProperStrand	8	chr11	97642952	97643060	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	5	-20.4627
chr4	148194916	148324868	protein_coding	Casz1	intron	ENSMUSG00000028977	NonProperStrand	23	chr14	76247791	76247843	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-9.8634
chr1	133904347	133904466	protein_coding	Elk4	utr5	ENSMUSG00000026436	ProperStrand	14	chr16	23110977	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.2008
chr8	122676356	122676374	protein_coding	6430548M08Rik	exon	ENSMUSG00000031824	NonProperStrand	3	chr6	125136432	125136532	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	1	-12.7834
chr1	84779515	84782696	protein_coding	Trip12	exon	ENSMUSG00000026219	ProperStrand	248	chr11	55296293	55296333	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	2	-5.8900
chr3	95733245	95733409	protein_coding	Anp32e	utr5	ENSMUSG00000015749	ProperStrand	25	chr16	23110892	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-9.9205
chr17	23946979	23957818	protein_coding	Srrm2	utr3	ENSMUSG00000039218	ProperStrand	521	chr9	15118306	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	5	-3.3626
chr9	78327184	78327238	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr9	95524998	95525035	snoRNA	ENSMUSG00000065346_SNORA4	.	ENSMUSG00000065346	ProperStrand	142	1	-4.6569
chr8	74118635	74118653	protein_coding	Pgls	exon	ENSMUSG00000031807	ProperStrand	8	chr16	23111693	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.6662
chr15	80639289	80733067	protein_coding	Tnrc6b	exon	ENSMUSG00000047888	ProperStrand	59	chr16	23110955	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-0.8243
chr13	55105923	55105939	protein_coding	Unc5a	exon	ENSMUSG00000025876	NonProperStrand	96	chr2	57090809	57090827	protein_coding	Gpd2	utr5	ENSMUSG00000026827	ProperStrand	93	1	-11.4881
chr7	133636211	133636316	protein_coding	Atxn2l	exon	ENSMUSG00000032637	ProperStrand	219	chr1	155287311	155287355	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	1	-6.4058
chr4	131866154	131866286	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	chr4	131908236	131908790	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	239	-inf
chr7	31565906	31565922	protein_coding	Dmkn	utr3	ENSMUSG00000060962	NonProperStrand	25	chr1	87983915	87983971	snoRNA	ENSMUSG00000077274_SNORA26	.	ENSMUSG00000077274	ProperStrand	361	1	-11.4890
chr19	3494032	3496532	protein_coding	Ppp6r3	exon	ENSMUSG00000024908	ProperStrand	63	chr12	106269471	106269561	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-4.0482
chr10	23505541	23505621	protein_coding	Rps12	intron	ENSMUSG00000061983	ProperStrand	309	chr7	117189921	117190011	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-0.7961
chr11	77996609	77996646	protein_coding	Rpl23a	intron	ENSMUSG00000058546	ProperStrand	121	chr1	162965530	162965600	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.0642
chr5	29778043	29778124	protein_coding	Nom1	utr3	ENSMUSG00000001569	ProperStrand	11	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	2	-17.6240
chr13	99086867	99086947	protein_coding	Btf3	utr5	ENSMUSG00000021660	ProperStrand	64	chr18	35714196	35714286	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-3.3248
chr9	113668786	113668806	protein_coding	Clasp2	intron	ENSMUSG00000033392	NonProperStrand	20	chrX	71517834	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-8.7528
chr16	72800514	72800532	protein_coding	Robo1	intron	ENSMUSG00000022883	NonProperStrand	188	chr5	93600412	93600472	protein_coding	Sept11	utr3	ENSMUSG00000058013	ProperStrand	79	1	-10.4692
chrX	20259291	20259559	protein_coding	Uba1	exon	ENSMUSG00000001924	ProperStrand	156	chr17	13112512	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-2.8166
chr10	79173606	79173656	protein_coding	Bsg	exon	ENSMUSG00000023175	ProperStrand	107	chr4	131865456	131865502	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	3	-7.5238
chr18	63238393	63238411	protein_coding	Fam38b	exon	ENSMUSG00000041482	NonProperStrand	50	chr18	33954849	33954939	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-3.8442
chr17	56758612	56758654	protein_coding	Lonp1	exon	ENSMUSG00000041168	ProperStrand	83	chr15	34370616	34370687	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-2.9610
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr5	74489595	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-3.6293
chr8	42108357	42108374	lincRNA	B430010I23Rik	exon	ENSMUSG00000084960	ProperStrand	4	chr16	23110841	23110886	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.6489
chrX	97690299	97690389	protein_coding	Igbp1	exon	ENSMUSG00000031221	ProperStrand	33	chr4	131866162	131866242	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-7.9673
chr5	123311768	123311786	protein_coding	Rnf34	exon	ENSMUSG00000029474	ProperStrand	15	chr11	69481335	69481433	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	7	-inf
chr4	32822435	32836886	protein_coding	Mdn1	exon	ENSMUSG00000058006	ProperStrand	184	chr7	29136537	29136620	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-1.5588
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr9	118415421	118415463	protein_coding	Golga4	utr5	ENSMUSG00000038708	ProperStrand	95	1	-7.8721
chr7	13516163	13516203	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr7	16524136	16524179	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	2	-8.4192
chr9	21934462	21934478	protein_coding	Acp5	exon	ENSMUSG00000001348	ProperStrand	66	chr11	87334322	87334377	protein_coding	Tex14	utr5	ENSMUSG00000010342	ProperStrand	41	1	-13.8918
chr7	75097803	75097820	protein_coding	Igf1r	exon	ENSMUSG00000005533	ProperStrand	121	chr2	26768408	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-4.2500
chr7	128792707	128792782	protein_coding	Usp31	exon	ENSMUSG00000063317	ProperStrand	35	chr19	59372984	59373029	protein_coding	Pdzd8	utr3	ENSMUSG00000074746	ProperStrand	42	11	-20.6579
chr16	91658768	91658858	protein_coding	Son	exon	ENSMUSG00000022961	ProperStrand	59	chr2	32818811	32818891	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-5.5036
chr8	96543512	96543564	protein_coding	Nudt21	utr3	ENSMUSG00000031754	ProperStrand	33	chr6	71550081	71550503	protein_coding	Kdm3a	exon	ENSMUSG00000053470	ProperStrand	41	1	-15.2844
chr5	100855900	100855940	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr17	45705473	45705807	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	1	-0.8759
chr12	8944941	8944959	protein_coding	Laptm4a	exon	ENSMUSG00000020585	ProperStrand	15	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-9.7858
chr12	88791404	88791441	protein_coding	Snw1	utr3	ENSMUSG00000021039	ProperStrand	36	chr11	69483136	69483212	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.3562
chr17	75045959	75045976	protein_coding	Birc6	exon	ENSMUSG00000024073	NonProperStrand	36	chr5	66029854	66029871	protein_coding	Pds5a	exon	ENSMUSG00000029202	ProperStrand	62	1	-14.2876
chr16	72800514	72800532	protein_coding	Robo1	intron	ENSMUSG00000022883	NonProperStrand	188	chr14	121332482	121332541	protein_coding	Ipo5	exon	ENSMUSG00000030662	ProperStrand	135	1	-9.3958
chr6	87769189	87769558	protein_coding	Isy1	exon	ENSMUSG00000030056	ProperStrand	172	chr8	87568991	87569122	protein_coding	Tnpo2	exon	ENSMUSG00000031691	ProperStrand	92	1	-10.3414
chr11	100213557	100213595	protein_coding	Hap1	exon	ENSMUSG00000006930	ProperStrand	21	chr4	116826699	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	2	-14.1588
chr8	78434500	78434590	protein_coding	1700007B14Rik	intron	ENSMUSG00000031620	ProperStrand	3	chr9	100663733	100663813	protein_coding	Stag1	intron	ENSMUSG00000037286	ProperStrand	10	1	-inf
chr7	52975297	52975314	protein_coding	Rpl18	exon	ENSMUSG00000059070	ProperStrand	116	chr5	74489640	74489676	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-2.5920
chr4	45360855	45360875	protein_coding	Dcaf10	intron	ENSMUSG00000035572	ProperStrand	4	chr8	73419683	73419773	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-8.6136
chr8	112576416	112576432	LINE	L1_Mus3	L1	chr8L1_Mus3112576213	ProperStrand	24	chr17	24857716	24857766	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.9467
chr19	6376250	6376330	protein_coding	Sf1	exon	ENSMUSG00000024949	ProperStrand	251	chr10	90581039	90581129	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-2.2096
chrX	99624108	99624124	protein_coding	Hdac8	exon	ENSMUSG00000067567	NonProperStrand	2	chr4	131865913	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-8.7800
chr2	150453046	150453066	protein_coding	Acss1	exon	ENSMUSG00000027452	ProperStrand	13	chr2	144087324	144087414	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	2	-15.3415
chr2	31650132	31652510	protein_coding	Abl1	exon	ENSMUSG00000026842	ProperStrand	131	chr7	29136621	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-3.6170
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr11	51551339	51551381	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	1	-1.8261
chr4	150459701	150459718	protein_coding	Camta1	exon	ENSMUSG00000014592	ProperStrand	170	chr11	55313049	55313149	protein_coding	G3bp1	utr3	ENSMUSG00000018583	ProperStrand	106	1	-10.0808
chr2	84510252	84510470	protein_coding	2700094K13Rik	exon	ENSMUSG00000076437	ProperStrand	13	chr5	130300460	130300540	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	4	-17.1616
chr8	124937800	124939975	protein_coding	Zc3h18	exon	ENSMUSG00000017478	ProperStrand	55	chr3	123210903	123210983	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.2092
chr7	63327765	63340364	protein_coding	Herc2	exon	ENSMUSG00000030451	ProperStrand	66	chr15	34370545	34370594	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-3.3742
chr11	87240292	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	chr9	15119652	15119732	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-0.8932
chr17	66468411	66468427	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	chr15	34370588	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	3	-2.7744
chr2	146862428	146862518	protein_coding	Xrn2	exon	ENSMUSG00000027433	ProperStrand	48	chr7	116664841	116664921	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	4	-10.2599
chrX	70703396	70703412	protein_coding	Haus7	exon	ENSMUSG00000031371	NonProperStrand	18	chr1	162965530	162965571	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-9.1933
chr6	70794803	70794819	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chr17	36000485	36000501	protein_coding	Nrm	exon	ENSMUSG00000059791	ProperStrand	253	1	-8.5409
chr13	9833566	9833655	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr12	52873610	52873690	protein_coding	Hectd1	exon	ENSMUSG00000035247	ProperStrand	41	4	-17.4621
chr18	35714262	35714293	lincRNA	Snhg4	intron	ENSMUSG00000090430	ProperStrand	270	chr11	62416577	62416656	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	4	-8.6765
chr9	56308344	56308363	protein_coding	Hmg20a	intron	ENSMUSG00000032329	ProperStrand	87	chr2	26494771	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.4560
chr11	112641855	112641875	lincRNA	BC006965	intron	ENSMUSG00000041674	NonProperStrand	3	chr18	77913045	77913062	protein_coding	8030462N17Rik	exon	ENSMUSG00000047466	NonProperStrand	21	1	-20.8842
chr19	6298259	6298349	protein_coding	Ehd1	exon	ENSMUSG00000024772	ProperStrand	30	chr5	121583034	121583114	protein_coding	Ptpn11	utr3	ENSMUSG00000043733	ProperStrand	25	1	-16.5178
chr8	119979556	119980788	protein_coding	4933407C03Rik	exon	ENSMUSG00000034390	ProperStrand	48	chr5	121655021	121655103	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.1671
chr16	13037789	13037879	DNA	MER58A	MER1_type	chr16MER58A13037713	NonProperStrand	1	chr9	44852380	44852460	protein_coding	Mpzl2	intron	ENSMUSG00000032092	ProperStrand	31	1	-inf
chr6	149258281	149258383	protein_coding	2810474O19Rik	utr5	ENSMUSG00000032712	ProperStrand	70	chr16	23111781	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.6638
chr5	38621988	38622096	protein_coding	Lyar	exon	ENSMUSG00000067367	ProperStrand	33	chr7	52382234	52382264	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-9.4862
chr4	118032818	118032835	protein_coding	Hyi	utr5	ENSMUSG00000006395	NonProperStrand	5	chr18	35714143	35714200	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-8.4504
chr12	86259496	86259557	protein_coding	1110018G07Rik	utr3	ENSMUSG00000042350	ProperStrand	13	chr4	131908269	131908292	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.0703
chr2	32818885	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	chr2	166889036	166889056	snoRNA	ENSMUSG00000077515_SNORD12	.	ENSMUSG00000077515	ProperStrand	191	2	-5.6059
chr1	134018692	134018903	protein_coding	Cdk18	exon	ENSMUSG00000026437	ProperStrand	51	chr3	95465210	95465264	protein_coding	Mcl1	utr3	ENSMUSG00000038612	ProperStrand	75	1	-13.1948
chr13	114109577	114109624	protein_coding	BC067074	exon	ENSMUSG00000021763	ProperStrand	14	chr4	122970468	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	2	-16.4245
chr15	75828058	75828074	protein_coding	Mapk15	exon	ENSMUSG00000063704	NonProperStrand	14	chr7	16524110	16524136	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	1	-12.6811
chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	chr16	17845782	17845870	protein_coding	Gm20518	intron	ENSMUSG00000092470	ProperStrand	14	6	-inf
chr11	120148960	120148976	protein_coding	Bahcc1	exon	ENSMUSG00000039741	NonProperStrand	268	chr3	34549704	34549783	protein_coding	Sox2	exon	ENSMUSG00000074637	ProperStrand	299	1	-7.1093
chr7	132794470	132794524	protein_coding	Gtf3c1	intron	ENSMUSG00000032777	ProperStrand	161	chr2	26493402	26493492	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-2.0141
chr9	37464746	37464787	protein_coding	Tbrg1	utr5	ENSMUSG00000011114	ProperStrand	56	chr10	128257530	128257546	protein_coding	Ormdl2	utr5	ENSMUSG00000025353	ProperStrand	51	1	-13.7814
chr4	148859356	148859993	protein_coding	Lzic	utr5	ENSMUSG00000028990	ProperStrand	9	chr10	23505247	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-7.7215
chr4	126000157	126000174	protein_coding	Tekt2	exon	ENSMUSG00000028845	ProperStrand	31	chr5	140902411	140902737	protein_coding	Eif3b	exon	ENSMUSG00000056076	ProperStrand	66	1	-14.4510
chr18	35063205	35063305	protein_coding	Etf1	utr3	ENSMUSG00000024360	ProperStrand	74	chr16	23110539	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.1114
chr8	114245230	114267641	protein_coding	Bcar1	utr5	ENSMUSG00000031955	ProperStrand	44	chr6	113118507	113118525	protein_coding	Lhfpl4	utr3	ENSMUSG00000042873	ProperStrand	47	1	-14.4452
chr2	90235286	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	99443584	99443601	protein_coding	Prkg2	intron	ENSMUSG00000029334	NonProperStrand	57	2	-7.5820
chr19	40646050	40646090	protein_coding	Aldh18a1	intron	ENSMUSG00000025007	ProperStrand	19	chr2	130101984	130102074	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-7.6478
chr3	121154834	121157871	protein_coding	Cnn3	exon	ENSMUSG00000053931	ProperStrand	77	chr3	123210871	123210951	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.6735
chr18	10052132	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr7	133572318	133572334	protein_coding-noncoding	Rabep2	utr5	ENSMUSG00000030727	ProperStrand	14	1	-11.7602
chr15	8952097	8956101	protein_coding	Ranbp3l	exon	ENSMUSG00000048424	ProperStrand	45	chr11	77996558	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-6.6615
chr2	168578043	168578126	protein_coding	Sall4	exon	ENSMUSG00000027547	ProperStrand	82	chr9	15119631	15119721	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.1035
chr17	29862906	29862923	SINE	RSINE1	B4	chr17RSINE129862876	NonProperStrand	1	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-inf
mmu-miR-6240	1	23	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr17	26360446	26360532	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	2	-4.8910
chr7	25755163	25756804	protein_coding	Rabac1	exon	ENSMUSG00000003380	ProperStrand	19	chr12	119301895	119301912	protein_coding	Dnahc11	intron	ENSMUSG00000018581	ProperStrand	65	1	-15.4762
chr9	21209379	21209427	protein_coding	Ilf3	utr3	ENSMUSG00000032178	ProperStrand	164	chr15	81937523	81937539	protein_coding	Mei1	exon	ENSMUSG00000068117	ProperStrand	53	1	-11.5456
chr16	20231461	20231562	protein_coding	Yeats2	utr3	ENSMUSG00000041215	ProperStrand	21	chr13	22127708	22127739	protein_coding	Hist1h2bk	utr5	ENSMUSG00000062727	ProperStrand	16	1	-18.1531
chr6	35144563	35146516	protein_coding	Nup205	exon	ENSMUSG00000038759	NonProperStrand	10	chr11	69483136	69483212	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	NonProperStrand	35	1	-18.2018
chr5	136488259	136488349	protein_coding	Dtx2	exon	ENSMUSG00000004947	ProperStrand	10	chr17	24857745	24857825	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-5.6778
chr1	91358413	91358430	protein_coding	Agap1	intron	ENSMUSG00000055013	ProperStrand	229	chr7	52382261	52382315	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-5.6349
chr4	129274175	129276279	protein_coding	Eif3i	exon	ENSMUSG00000028798	ProperStrand	9	chr15	34370545	34370599	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-7.2969
chr1	129699063	129699153	protein_coding	Ccnt2	exon	ENSMUSG00000026349	ProperStrand	34	chr10	5987871	5987951	protein_coding	Akap12	utr3	ENSMUSG00000038587	ProperStrand	1008	1	-8.8157
chr4	140881165	140881245	protein_coding	Epha2	intron	ENSMUSG00000006445	ProperStrand	148	chr10	80644981	80645072	protein_coding	Eef2	utr3	ENSMUSG00000034994	ProperStrand	2244	1	-4.3501
chr5	92715676	92715718	protein_coding	Sdad1	utr3	ENSMUSG00000029415	ProperStrand	63	chr16	23111753	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-3.3449
chr2	32774529	32780261	protein_coding	Fam129b	utr3	ENSMUSG00000026796	ProperStrand	22	chr16	23110828	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	7	-13.3827
chr13	49802123	49811145	protein_coding	Iars	exon	ENSMUSG00000037851	ProperStrand	95	chr19	8963023	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-4.4991
chr13	60837017	60837037	protein_coding	Dapk1	intron	ENSMUSG00000021559	ProperStrand	109	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-6.0536
chr3	90304008	90306102	protein_coding	2500003M10Rik	exon	ENSMUSG00000001017	ProperStrand	28	chr10	110918644	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-4.8953
chr3	51110401	51110418	protein_coding	Elf2	intron	ENSMUSG00000037174	NonProperStrand	9	chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	1	-13.3739
chr1	155067923	155090414	protein_coding	Lamc1	exon	ENSMUSG00000026478	ProperStrand	239	chr11	69483135	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-2.0177
chr11	102265814	102265914	protein_coding	Slc25a39	exon	ENSMUSG00000018677	ProperStrand	35	chr4	131865948	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.6607
chr15	79946861	79946951	protein_coding	Syngr1	utr3	ENSMUSG00000022415	ProperStrand	51	chr10	23505151	23505231	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	6	-10.2899
chr11	51471032	51471093	protein_coding	D930048N14Rik	utr3	ENSMUSG00000052563	ProperStrand	1	chr1	88247743	88247798	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-inf
chr9	14308127	14309317	protein_coding	Cwc15	exon	ENSMUSG00000004096	ProperStrand	6	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-9.9053
chr19	46157090	46157284	protein_coding	Nolc1	exon	ENSMUSG00000015176	ProperStrand	53	chr7	150717298	150717361	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	2	-9.3853
chr2	27301863	27301920	protein_coding	Brd3	utr3	ENSMUSG00000026918	ProperStrand	85	chr16	23111770	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.3785
chr16	70537136	70537153	protein_coding	Gbe1	intron	ENSMUSG00000022707	NonProperStrand	17	chr2	26766830	26766854	snoRNA	ENSMUSG00000065258_SNORD24	.	ENSMUSG00000065258	ProperStrand	130	1	-14.3221
chr1	71632459	71632508	protein_coding	Fn1	utr3	ENSMUSG00000026193	ProperStrand	931	chr2	130109497	130109513	protein_coding	Idh3b	exon	ENSMUSG00000027406	ProperStrand	146	1	-6.0719
chr14	31826494	31826510	protein_coding	Gnl3	exon	ENSMUSG00000042354	NonProperStrand	59	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-5.6638
chr8	113692579	113692638	protein_coding	Glg1	exon	ENSMUSG00000003316	ProperStrand	83	chr1	9932550	9932591	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-7.0835
chr17	23956741	23956810	protein_coding	Srrm2	utr3	ENSMUSG00000039218	ProperStrand	521	chr11	6519819	6519919	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-3.7421
chr9	119708219	119708236	protein_coding	Scn11a	intron	ENSMUSG00000034115	ProperStrand	55	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.4352
chrX	7857170	7857187	protein_coding	Slc38a5	utr3	ENSMUSG00000031170	NonProperStrand	1	chr8	73419673	73419776	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	NonProperStrand	53	1	-inf
chr16	58670580	58670680	protein_coding	Cpox	exon	ENSMUSG00000022742	ProperStrand	7	chr18	35716842	35716883	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-6.2708
chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-2.7308
chr8	125022657	125023610	protein_coding	Fam38a	exon	ENSMUSG00000014444	ProperStrand	132	chr16	23111772	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-0.8128
chr11	69870769	69870785	protein_coding	Asgr1	exon	ENSMUSG00000020884	NonProperStrand	145	chr10	127982147	127982226	protein_coding	Zc3h10	exon	ENSMUSG00000039810	ProperStrand	9	1	-15.4269
chr8	113447125	113447170	protein_coding	St3gal2	intron	ENSMUSG00000031749	ProperStrand	206	chr2	22444184	22444224	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-5.3450
chr14	52823635	52823754	protein_coding	Chd8	exon	ENSMUSG00000053754	ProperStrand	167	chr16	23110556	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-0.9364
chr6	82724410	82724448	protein_coding	Hk2	utr5	ENSMUSG00000000628	ProperStrand	88	chr11	6428069	6428119	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.5174
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr10	85456343	85456359	protein_coding	Bpifc	intron	ENSMUSG00000050108	ProperStrand	17	1	-11.1498
chr15	81681259	81681276	protein_coding	Tob2	exon	ENSMUSG00000048546	ProperStrand	7	chr2	32818884	32818934	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-9.8490
chr10	12378449	12380656	protein_coding	Utrn	exon	ENSMUSG00000019820	ProperStrand	69	chr1	162965533	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.0243
chrX	84483703	84483741	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr4	57906285	57906346	protein_coding	Gm20459	utr3	ENSMUSG00000089945	ProperStrand	31	1	-9.5781
chr14	20610824	20610869	protein_coding	Nid2	exon	ENSMUSG00000021806	ProperStrand	372	chr1	20807526	20807883	protein_coding	Mcm3	exon	ENSMUSG00000041859	NonProperStrand	4	1	-15.3416
chr11	119876817	119876833	protein_coding	Aatk	exon	ENSMUSG00000025375	ProperStrand	4	chr8	72474649	72498001	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-16.4597
chr14	33153227	33154409	protein_coding	Ogdhl	exon	ENSMUSG00000021913	ProperStrand	182	chr4	131908239	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-1.1416
chr1	190267301	190267317	protein_coding	Ush2a	exon	ENSMUSG00000026609	NonProperStrand	60	chr6	118355346	118358033	protein_coding	Bms1	exon	ENSMUSG00000030138	ProperStrand	107	1	-12.1517
chr6	28396307	28396323	protein_coding	Pax4	exon	ENSMUSG00000029706	NonProperStrand	1	chr4	116826700	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-inf
chr8	87221606	87222128	protein_coding	Trmt1	exon	ENSMUSG00000001909	ProperStrand	88	chr7	29136539	29136639	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.7454
chr4	55431686	55431705	lincRNA	Gm12505	exon	ENSMUSG00000087070	ProperStrand	447	chr17	24665420	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-1.4252
chr8	73884312	73884348	protein_coding	Myo9b	utr3	ENSMUSG00000004677	ProperStrand	78	chr7	150244339	150244412	protein_coding	Cd81	intron	ENSMUSG00000037706	ProperStrand	88	1	-12.0158
chr11	119004715	119004762	protein_coding	Tbc1d16	utr3	ENSMUSG00000039976	ProperStrand	19	chr15	34370545	34370595	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-9.4665
chr7	54442866	54443502	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	chr16	23111701	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-0.9480
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chrX	149828130	149828146	protein_coding	Klf8	utr3	ENSMUSG00000041649	NonProperStrand	107	1	-8.2119
chr1	148205164	148205182	LINE	L1_Mus2	L1	chr1L1_Mus2148204807	ProperStrand	1	chr19	8963153	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-inf
chr1	177622594	177622614	protein_coding	Opn3	exon	ENSMUSG00000026525	ProperStrand	31	chr4	131908229	131908318	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.4690
chr1	72272873	72272963	snRNA	ENSMUSG00000075752_U2	.	ENSMUSG00000075752	ProperStrand	535	chr2	130101241	130101310	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-2.4775
chr14	35147464	35148546	protein_coding	Glud1	exon	ENSMUSG00000021794	ProperStrand	72	chr2	127416800	127416890	protein_coding	Mrps5	intron	ENSMUSG00000027374	ProperStrand	84	1	-12.2716
chr11	97642998	97643090	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	chr11	51551279	51551370	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	8	-0.8922
chr19	44910120	44910137	antisense	1700039E22Rik	.	ENSMUSG00000092369	ProperStrand	2	chr8	73419657	73419744	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-10.3981
chr5	34976632	34976838	protein_coding	Mfsd10	exon	ENSMUSG00000001082	ProperStrand	38	chr4	131865868	131865948	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.5179
chrX	135868830	135868920	protein_coding	Trap1a	exon	ENSMUSG00000051257	ProperStrand	66	chr4	131908814	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-2.1502
chr10	127428422	127428438	protein_coding	Hsd17b6	exon	ENSMUSG00000025396	NonProperStrand	68	chr11	77995082	77996391	protein_coding	Rpl23a	exon	ENSMUSG00000058546	ProperStrand	121	1	-11.6526
chr9	21571478	21571516	protein_coding	Kank2	utr3	ENSMUSG00000032194	ProperStrand	196	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	4	-5.6515
chr3	104602388	104602409	protein_coding	Mov10	exon	ENSMUSG00000002227	ProperStrand	96	chr1	75484537	75484553	protein_coding	Obsl1	exon	ENSMUSG00000026211	NonProperStrand	192	1	-10.0362
chr10	80797342	80797358	protein_coding	Tbxa2r	exon	ENSMUSG00000034881	NonProperStrand	40	chr16	23110840	23110867	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.7072
chr4	137077372	137104080	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	chr14	33005041	33005225	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	4	-1.8842
chr6	96322858	96322874	protein_coding	Fam19a1	intron	ENSMUSG00000059187	NonProperStrand	60	chr19	8800085	8800110	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-7.6080
chr7	53945240	53948162	protein_coding	Saal1	exon	ENSMUSG00000006763	ProperStrand	6	chr4	116230385	116230401	protein_coding	Gpbp1l1	utr5	ENSMUSG00000034042	NonProperStrand	106	1	-16.8192
chr1	98833040	98833060	processed_transcript	Slco6b1	.	ENSMUSG00000045463	NonProperStrand	2	chr6	23197741	23197759	protein_coding	Fezf1	exon	ENSMUSG00000029697	NonProperStrand	2	1	-inf
chr8	87195289	87196877	protein_coding	Nacc1	utr3	ENSMUSG00000001910	ProperStrand	130	chr5	121655125	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	4	-8.6251
chr7	133520549	133520567	protein_coding	Spns1	exon	ENSMUSG00000030741	NonProperStrand	16	chr16	23110912	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-3.6512
chr13	107737212	107737671	protein_coding	Dimt1	exon	ENSMUSG00000021692	ProperStrand	185	chr7	29136525	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-1.5483
chr8	49217206	49217223	protein_coding	Dctd	intron	ENSMUSG00000031562	NonProperStrand	3	chr11	69483188	69483268	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-8.5256
chr5	3693225	3693241	protein_coding	Ankib1	exon	ENSMUSG00000040351	NonProperStrand	98	chr17	35299507	35299640	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	2	-6.4821
chr12	114374833	114374849	protein_coding	Mta1	exon	ENSMUSG00000021144	NonProperStrand	11	chr16	23111701	23111827	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	NonProperStrand	47	1	-17.3307
chr2	90235309	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	ProperStrand	24	chr9	65049527	65049607	snRNA	ENSMUSG00000075930_U5	.	ENSMUSG00000075930	NonProperStrand	3	1	-inf
chr5	145532375	145532393	protein_coding	Trrap	intron	ENSMUSG00000045482	ProperStrand	399	chr11	35853255	35853271	protein_coding	Odz2	exon	ENSMUSG00000049336	ProperStrand	106	1	-8.3793
chr18	56878868	56878897	protein_coding	Lmnb1	intron	ENSMUSG00000024590	ProperStrand	176	chr7	116663702	116663763	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-0.9087
chr2	90235305	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr13	114005857	114005874	protein_coding	Gzmk	intron	ENSMUSG00000042385	ProperStrand	14	2	-11.8833
chr14	27900616	27919082	protein_coding	Il17rd	utr3	ENSMUSG00000040717	ProperStrand	24	chr14	33005084	33005236	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	2	-9.4516
chr10	59413637	59413696	protein_coding	Ddit4	exon	ENSMUSG00000020108	ProperStrand	49	chr3	123210854	123210880	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.4031
chr1	155287326	155287354	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	chrX	71517834	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-2.4767
chr3	88162982	88163062	protein_coding	Smg5	exon	ENSMUSG00000001415	ProperStrand	70	chr1	20922259	20922275	protein_coding	Paqr8	utr5	ENSMUSG00000025931	NonProperStrand	60	1	-13.0068
chr17	29469499	29469542	protein_coding	Mtch1	utr3	ENSMUSG00000024012	ProperStrand	13	chr14	28296280	28296298	protein_coding	D14Abb1e	utr3	ENSMUSG00000040651	ProperStrand	49	2	-inf
chr11	86518251	86518431	protein_coding	Cltc	exon	ENSMUSG00000047126	ProperStrand	319	chr9	120038614	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	9	-10.7010
chr18	20904474	20904564	protein_coding	B4galt6	utr5	ENSMUSG00000056124	ProperStrand	31	chr7	116664841	116664921	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.7407
chr7	29110989	29111089	protein_coding	Supt5h	exon	ENSMUSG00000003435	ProperStrand	123	chr14	76372292	76372364	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	2	-12.0956
chr1	134465558	134465574	protein_coding	Nfasc	utr3	ENSMUSG00000026442	NonProperStrand	48	chr2	118357028	118357088	protein_coding	Bmf	utr3	ENSMUSG00000040093	ProperStrand	53	1	-14.0101
chr19	41992420	41992484	protein_coding	Pgam1	utr3	ENSMUSG00000011752	ProperStrand	124	chr15	99011110	99011141	protein_coding	Spats2	exon	ENSMUSG00000051934	ProperStrand	71	6	-20.6524
chr5	115940306	115940408	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	chr16	23111389	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	10	-0.7678
chr11	69219590	69219775	protein_coding	Kdm6b	exon	ENSMUSG00000018476	ProperStrand	76	chr6	8543653	8543672	protein_coding	Glcci1	utr3	ENSMUSG00000029638	NonProperStrand	2	1	-inf
chr10	42042437	42042496	protein_coding	Lace1	intron	ENSMUSG00000038302	ProperStrand	12	chr4	131865945	131865987	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-11.4353
chr3	100750663	100750731	protein_coding-noncoding	Ttf2	utr3	ENSMUSG00000033222	ProperStrand	24	chr16	23111777	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-11.9057
chr1	44161381	44161481	protein_coding	Kdelc1	intron	ENSMUSG00000026047	ProperStrand	22	chr5	130300531	130300553	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	8	-21.2295
chr2	4974190	4974207	protein_coding	Optn	exon	ENSMUSG00000026672	ProperStrand	451	chr7	52382753	52382832	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-2.9143
chr6	70794802	70794818	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chr2	144091716	144091827	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	ProperStrand	549	4	-25.2349
chr19	3526836	3526918	protein_coding	Ppp6r3	exon	ENSMUSG00000024908	ProperStrand	63	chr1	63225287	63225322	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	1	-8.7383
chr5	137967425	137968156	protein_coding	Gigyf1	utr3	ENSMUSG00000029714	ProperStrand	49	chr16	23110487	23110577	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	11	-inf
chrX	102993249	102993343	protein_coding	Atrx	utr3	ENSMUSG00000031229	ProperStrand	54	chr16	23110535	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.6430
chr5	121654885	121655181	protein_coding	Rpl6	intron	ENSMUSG00000029614	ProperStrand	332	chr5	121655021	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	17	-inf
chr4	128860940	128860957	protein_coding	S100pbp	utr5	ENSMUSG00000040928	ProperStrand	12	chr8	73419708	73419773	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-6.2451
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr12	111929857	111930413	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	1	-1.7454
chr4	41254287	41254306	protein_coding	Dcaf12	intron	ENSMUSG00000028436	NonProperStrand	1	chr16	23111447	23111494	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-inf
chr3	152450610	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	chr2	26494700	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	6	-3.1283
chr15	18748416	18748434	lincRNA	C030047K22Rik	exon	ENSMUSG00000084873	NonProperStrand	2	chr4	133573038	133573174	protein_coding	Lin28a	intron	ENSMUSG00000050966	NonProperStrand	5	1	-21.6030
chr4	124736326	124736344	protein_coding	Dnali1	exon	ENSMUSG00000042707	ProperStrand	45	chr17	35089183	35089232	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-6.0505
chr9	46084530	46084610	protein_coding-noncoding	Zfp259	utr5	ENSMUSG00000032078	ProperStrand	3	chr2	179928551	179928722	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	2	-inf
chr4	56786186	56787407	protein_coding	Ikbkap	exon	ENSMUSG00000028431	ProperStrand	44	chr11	60659654	60659681	protein_coding	Dhrs7b	intron	ENSMUSG00000042569	ProperStrand	5	1	-18.7669
chr7	72797180	72797217	protein_coding	Tarsl2	exon	ENSMUSG00000030515	ProperStrand	4	chr4	131908809	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-16.0559
chr10	23498174	23498192	LTR	MTEb-int	MaLR	chr10MTEb-int23498089	ProperStrand	1	chr2	30892791	30895955	protein_coding	Fnbp1	exon	ENSMUSG00000075415	ProperStrand	53	1	-inf
chr18	61169132	61169148	protein_coding	Slc6a7	exon	ENSMUSG00000052026	NonProperStrand	11	chr8	32260335	32260424	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-8.0215
chr9	14538701	14538791	protein_coding	Piwil4	intron	ENSMUSG00000036912	ProperStrand	24	chr17	24857738	24857820	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.9467
chr2	41199972	41199989	protein_coding	Lrp1b	exon	ENSMUSG00000049252	ProperStrand	376	chr11	6428077	6428164	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-1.9417
chr2	90235285	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	92735215	92735231	protein_coding	Adamts9	intron	ENSMUSG00000030022	NonProperStrand	5	1	-9.5409
chr2	32101617	32103149	protein_coding	Pomt1	exon	ENSMUSG00000039254	ProperStrand	8	chr15	5068427	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	2	-16.1917
chr5	89663839	89663855	protein_coding	Slc4a4	exon	ENSMUSG00000060961	NonProperStrand	195	chr11	48670537	48670559	tRNA	tRNA2021-LeuAAG	.	1752816	ProperStrand	13	1	-14.0734
chr11	65503188	65503212	protein_coding	Map2k4	utr3	ENSMUSG00000033352	ProperStrand	10	chr10	83989627	83989643	protein_coding	Ckap4	utr3	ENSMUSG00000046841	ProperStrand	60	1	-16.9842
chr1	6409361	6409441	Low_complexity	CT-rich	Low_complexity	chr1CT-rich6409257	ProperStrand	1	chr1	6409542	6409632	SINE	B1_Mus1	Alu	chr1B1_Mus16409537	NonProperStrand	1	1	-inf
chr16	23110828	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	chr1	9932549	9932629	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	45	-1.6169
chr19	4803870	4803939	protein_coding	Rbm14	exon	ENSMUSG00000006456	ProperStrand	84	chr11	106874233	106874254	tRNA	tRNA945-ArgCCG	.	77630	ProperStrand	133	4	-inf
chr8	74906596	74906633	protein_coding	Eps15l1	exon	ENSMUSG00000006276	ProperStrand	42	chr8	72426929	72426945	protein_coding	Tssk6	exon	ENSMUSG00000047654	NonProperStrand	4	1	-19.4292
chr11	119142059	119142425	protein_coding	Gaa	intron	ENSMUSG00000025579	ProperStrand	149	chr17	13112519	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	3	-7.4178
chr1	152268927	152269668	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-0.9015
chr5	100855902	100855942	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr5	77390254	77390423	protein_coding	Paics	exon	ENSMUSG00000029247	ProperStrand	78	2	-9.9348
chr10	68803494	68803547	protein_coding	Cdk1	exon	ENSMUSG00000019942	ProperStrand	42	chr11	69483136	69483192	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-5.3171
chr1	139976731	139976747	protein_coding	Ptprc	exon	ENSMUSG00000026395	ProperStrand	27	chr9	59526807	59526859	protein_coding	Pkm2	utr3	ENSMUSG00000032294	ProperStrand	1296	1	-8.7819
chr15	38226524	38226585	protein_coding	Klf10	exon	ENSMUSG00000037465	ProperStrand	33	chr2	70927899	70927915	protein_coding	Dcaf17	exon	ENSMUSG00000041966	NonProperStrand	89	1	-13.7307
chr2	164760021	164760037	DNA	MER5A1	MER1_type	chr2MER5A1164760014	NonProperStrand	1	chr17	45710143	45710167	protein_coding	Hsp90ab1	utr5	ENSMUSG00000023944	ProperStrand	1627	1	-inf
chr11	74133382	74133413	rRNA	n-R5s71	.	ENSMUSG00000070178	ProperStrand	9	chr2	166890780	166890829	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	1	-14.2718
chr19	5760797	5760897	protein_coding	Scyl1	exon	ENSMUSG00000024941	ProperStrand	59	chr4	131865916	131865987	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.7940
chr14	32480365	32480394	protein_coding	Btd	exon	ENSMUSG00000021900	ProperStrand	1	chr3	101259306	101259327	protein_coding	Igsf3	exon	ENSMUSG00000042035	ProperStrand	73	1	-inf
chr7	148256954	148257108	protein_coding	B4galnt4	exon	ENSMUSG00000055629	ProperStrand	11	chr15	34370574	34370664	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-6.8789
chr8	112387973	112387989	antisense	Gm17344	.	ENSMUSG00000078143	NonProperStrand	100	chr4	59202368	59202387	protein_coding	Ugcg	utr5	ENSMUSG00000028381	NonProperStrand	1	1	-inf
chr18	74439576	74439666	protein_coding	Mbd1	intron	ENSMUSG00000024561	ProperStrand	13	chr16	23110870	23110940	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.3283
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr19	9018593	9020258	protein_coding	Mta2	exon	ENSMUSG00000071646	ProperStrand	70	1	-7.4322
chr6	67217204	67217234	protein_coding	Serbp1	exon	ENSMUSG00000036371	ProperStrand	261	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-1.1874
chr5	34974530	34974620	protein_coding	Add1	utr3	ENSMUSG00000029106	ProperStrand	88	chr4	131908264	131908354	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-1.8312
chr7	133435826	133435864	protein_coding	Sbk1	exon	ENSMUSG00000042978	ProperStrand	24	chr16	23111742	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.4982
chr18	77952584	77952601	protein_coding	8030462N17Rik	utr5	ENSMUSG00000047466	NonProperStrand	21	chr11	106362569	106362635	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-9.5207
chr10	70845086	70845176	protein_coding	Ipmk	utr3	ENSMUSG00000060733	ProperStrand	22	chr4	131865891	131865971	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.5019
chr9	106612704	106613019	protein_coding	Rad54l2	exon	ENSMUSG00000040661	ProperStrand	51	chr17	35088957	35089017	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-6.1880
chr15	82980091	82980224	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr1	89681149	89681273	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	2	-1.0223
chr17	35197373	35197429	protein_coding	Ddah2	intron	ENSMUSG00000007039	ProperStrand	23	chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	1	-11.4287
chr11	72259689	72259715	protein_coding	Mybbp1a	exon	ENSMUSG00000040463	ProperStrand	279	chr2	158182156	158182278	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-2.2029
chr8	3642156	3642172	protein_coding	Stxbp2	intron	ENSMUSG00000004626	NonProperStrand	73	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.4730
chr11	74718932	74719010	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	chr15	79908956	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	4	-6.5156
chr5	149113021	149113038	protein_coding	Mtus2	exon	ENSMUSG00000029651	ProperStrand	114	chrX	148493402	148493456	protein_coding	Smc1a	exon	ENSMUSG00000041133	ProperStrand	104	1	-10.9193
chr17	46382603	46382639	protein_coding	Polr1c	exon	ENSMUSG00000067148	ProperStrand	58	chr3	123210865	123210908	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.1217
chrX	148297248	148364700	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	chr7	116663646	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	10	-6.0268
chr12	17552947	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr19	8799583	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	11	-9.2961
chr8	31436465	31436482	LINE	Lx7	L1	chr8Lx731436390	ProperStrand	23	chr10	80078435	80078454	protein_coding	Scamp4	utr3	ENSMUSG00000078441	NonProperStrand	20	1	-17.2329
chr2	69358026	69358044	protein_coding	Lrp2	exon	ENSMUSG00000027070	ProperStrand	35	chr16	23110454	23110516	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.4208
chr18	8463556	8463608	LINE	Lx2	L1	chr18Lx28462717	NonProperStrand	2	chr1	162968484	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-13.5157
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr2	170337006	170337022	protein_coding	Pfdn4	utr5	ENSMUSG00000052033	ProperStrand	55	1	-9.5442
chr17	39979969	39979997	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr1	133829739	133829806	protein_coding	Nucks1	utr3	ENSMUSG00000026434	ProperStrand	59	2	-11.6542
chr2	164732935	164732951	protein_coding	Zfp335	exon	ENSMUSG00000039834	ProperStrand	42	chr9	120038552	120038612	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.6915
chr5	115848210	115848227	antisense	Gm13832	.	ENSMUSG00000087292	ProperStrand	47	chr1	155096729	155096817	protein_coding	Lamc1	exon	ENSMUSG00000026478	ProperStrand	239	1	-11.0341
chr6	125743619	125746270	protein_coding	Ano2	exon	ENSMUSG00000038115	ProperStrand	6	chr9	15119646	15119736	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-16.8601
chr5	120913216	120913233	protein_coding	Sdsl	utr5	ENSMUSG00000029596	NonProperStrand	2	chr7	117189863	117189943	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-13.6430
chr13	9833550	9833639	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chrX	140804107	140804187	protein_coding-noncoding	Alg13	utr3	ENSMUSG00000041718	ProperStrand	87	2	-7.0893
chr15	92180472	92180488	lincRNA	Gm16629	intron	ENSMUSG00000085294	ProperStrand	7	chr16	23111723	23111823	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.9463
chr2	118639973	118639993	protein_coding	D2Ertd750e	exon	ENSMUSG00000027331	ProperStrand	26	chr19	8800377	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	6	-inf
chr2	32548014	32548192	protein_coding	Fpgs	exon	ENSMUSG00000009566	ProperStrand	8	chr10	90581057	90581137	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-8.8764
chr12	7904336	7904356	LTR	RMER17B	ERVK	chr12RMER17B7903672	NonProperStrand	1	chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	1	-inf
chr2	127647578	127647594	protein_coding	Bub1	exon	ENSMUSG00000027379	ProperStrand	26	chr11	97642952	97643072	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.9888
chr4	126559848	126579858	protein_coding	Zmym4	exon	ENSMUSG00000042446	ProperStrand	94	chr7	117166749	117166858	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	4	-12.8656
chr1	161208236	161214700	protein_coding	Rfwd2	exon	ENSMUSG00000040782	ProperStrand	17	chr19	8799604	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	3	-inf
chr15	86197810	86197910	protein_coding	Tbc1d22a	intron	ENSMUSG00000051864	ProperStrand	15	chr16	23111386	23111450	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-6.1656
chr9	54734324	54734341	protein_coding	Ireb2	exon	ENSMUSG00000032293	NonProperStrand	2	chr1	162965531	162965589	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-10.5602
chr15	44504363	44504382	protein_coding	Sybu	exon	ENSMUSG00000022340	NonProperStrand	28	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-10.4647
chr2	57158261	57158313	protein_coding	Gpd2	exon	ENSMUSG00000026827	ProperStrand	93	chr11	106362337	106362365	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-4.9886
chrX	33607698	33607715	protein_coding	Dock11	exon	ENSMUSG00000031093	ProperStrand	42	chr3	123210854	123210946	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	5	-12.3146
chr9	64954192	64954209	protein_coding	Igdcc4	intron	ENSMUSG00000032816	ProperStrand	29	chr7	116663710	116663750	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.8258
chr13	96247406	96248477	protein_coding	S100z	exon	ENSMUSG00000021679	NonProperStrand	43	chr16	23110526	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.0458
chr12	105490110	105490132	pseudogene	Serpina3h	.	ENSMUSG00000041449	NonProperStrand	2	chr2	130101258	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-14.0400
chr14	26692065	26692155	protein_coding	Anxa11	exon	ENSMUSG00000021866	ProperStrand	30	chr11	97643002	97643082	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.7184
chr3	153575131	153575169	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	chr4	131866157	131866247	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	5	-2.8134
chr2	31068043	31068092	protein_coding	Gpr107	intron	ENSMUSG00000000194	ProperStrand	99	chr8	32260335	32260374	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	2	-6.2346
chr8	47296136	47296154	protein_coding	Slc25a4	intron	ENSMUSG00000031633	ProperStrand	53	chr11	106362566	106362636	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-7.6520
chr1	129565231	129565252	protein_coding	Tmem163	exon	ENSMUSG00000026347	ProperStrand	7	chr5	121655062	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-8.0440
chr11	48619073	48619484	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	NonProperStrand	3	chr4	131865856	131865956	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	NonProperStrand	39	1	-19.3826
chr16	43580479	43580555	protein_coding	Zbtb20	intron	ENSMUSG00000022708	ProperStrand	28	chr10	80639462	80640419	protein_coding	Eef2	utr5	ENSMUSG00000034994	ProperStrand	2244	1	-7.6183
chr2	90235299	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr15	99256421	99256437	protein_coding	Nckap5l	exon	ENSMUSG00000023009	ProperStrand	51	2	-7.9100
chr1	145514755	145514817	protein_coding	Cdc73	exon	ENSMUSG00000026361	ProperStrand	22	chr11	68886928	68887018	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-6.1004
chr7	29105061	29105260	protein_coding	Supt5h	exon	ENSMUSG00000003435	ProperStrand	123	chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	1	-7.6313
chr5	112865460	112865476	protein_coding	Sez6l	exon	ENSMUSG00000058153	ProperStrand	81	chr18	35716813	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.6926
chr1	36609590	36609607	protein_coding	Sema4c	exon	ENSMUSG00000026121	NonProperStrand	5	chr13	99576344	99585122	protein_coding	Fcho2	utr5	ENSMUSG00000041685	ProperStrand	10	1	-19.1587
chr4	57706987	57707003	protein_coding	Palm2	intron	ENSMUSG00000090053	NonProperStrand	187	chr9	120038467	120038552	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.2166
chr11	116711594	116711655	protein_coding	Srsf2	utr3	ENSMUSG00000034120	ProperStrand	132	chr18	33954817	33954907	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-2.1273
chr9	59525888	59525961	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr4	139024065	139024091	protein_coding	Ubr4	exon	ENSMUSG00000066036	ProperStrand	304	3	-9.7547
chr13	22127342	22127415	protein_coding	Hist1h2ah	exon	ENSMUSG00000069302	ProperStrand	12	chr11	83107805	83107883	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	5	-inf
chr9	121823892	121823908	protein_coding	Cyp8b1	exon	ENSMUSG00000050445	NonProperStrand	101	chr19	8963026	8963082	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.4591
chrX	103395944	103395990	protein_coding	Pgk1	intron	ENSMUSG00000062070	ProperStrand	484	chr13	81029932	81029960	protein_coding	Arrdc3	exon	ENSMUSG00000074794	ProperStrand	6	1	-13.8906
chr8	98331290	98331307	protein_coding	Cnot1	utr5	ENSMUSG00000036550	ProperStrand	315	chr11	68886971	68887033	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-1.3275
chr2	128243109	128243199	lincRNA	Gm14005	intron	ENSMUSG00000074813	NonProperStrand	3	chr2	180400589	180400669	protein_coding	Dido1	intron	ENSMUSG00000038914	NonProperStrand	4	1	-inf
chr1	64778348	64778382	protein_coding	Fzd5	utr3	ENSMUSG00000045005	ProperStrand	175	chr15	69516005	69516037	snoRNA	ENSMUSG00000080689_SNORA79	.	ENSMUSG00000080689	ProperStrand	7	2	-22.8424
chr8	67346972	67346996	protein_coding	Klhl2	exon	ENSMUSG00000031605	ProperStrand	14	chr9	15119696	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.3767
chr1	75398936	75398952	protein_coding	Speg	exon	ENSMUSG00000026207	ProperStrand	42	chr8	73419657	73419745	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.7861
chr5	143907083	143907102	SINE	B4A	B4	chr5B4A143906887	ProperStrand	12	chrX	7240663	7240685	protein_coding	Prickle3	exon	ENSMUSG00000031145	ProperStrand	1	1	-inf
chr15	36538565	36538649	protein_coding	Pabpc1	utr5	ENSMUSG00000022283	ProperStrand	908	chr5	116012482	116012531	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	3	-11.3034
chr2	132688073	132688117	protein_coding	Crls1	exon	ENSMUSG00000027357	ProperStrand	5	chr9	58728496	58728514	protein_coding	Neo1	exon	ENSMUSG00000032340	NonProperStrand	9	1	-18.9379
chr2	32162200	32162216	protein_coding	Golga2	utr3	ENSMUSG00000002546	NonProperStrand	35	chr18	35716763	35716815	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.1046
chr4	134880880	134880896	protein_coding	Srrm1	exon	ENSMUSG00000028809	NonProperStrand	25	chr15	82980100	82980191	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	10	-inf
chr6	122682808	122685466	protein_coding	Slc2a3	exon	ENSMUSG00000003153	ProperStrand	682	chr2	168766270	168766288	protein_coding	Zfp64	exon	ENSMUSG00000027551	NonProperStrand	10	1	-12.1110
chr12	99497602	99497618	protein_coding	Galc	utr5	ENSMUSG00000021003	NonProperStrand	65	chr8	13876174	13876197	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-6.9846
chr15	12819055	12819072	protein_coding	Drosha	intron	ENSMUSG00000022191	ProperStrand	163	chr4	122970403	122970508	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	2	-8.9069
chr13	63426284	63426300	protein_coding-noncoding	Fancc	utr3	ENSMUSG00000021461	ProperStrand	4	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-13.4061
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr9	91260033	91260050	protein_coding	Zic1	utr5	ENSMUSG00000032368	ProperStrand	3	1	-13.2786
chr11	15482748	15482768	LINE	Lx3_Mus	L1	chr11Lx3_Mus15482553	NonProperStrand	1	chr6	71832577	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-inf
chr11	48274998	48275088	LTR	ORR1A4	MaLR	chr11ORR1A448274773	NonProperStrand	1	chr12	45028562	45028652	LTR	ORR1A2	MaLR	chr12ORR1A245028351	NonProperStrand	1	1	-inf
chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	chr10	126971469	126971517	protein_coding	Nxph4	utr5	ENSMUSG00000040258	ProperStrand	8	1	-12.2409
chr17	29837926	29837949	protein_coding	Ftsjd2	exon	ENSMUSG00000024019	ProperStrand	31	chr16	23110912	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0062
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr8	87525222	87525238	protein_coding	Hook2	exon	ENSMUSG00000052566	ProperStrand	204	1	-7.9812
chr3	58352508	58352621	protein_coding	Eif2a	exon	ENSMUSG00000027810	ProperStrand	11	chr15	5068407	5068453	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-9.5003
chr18	9707757	9707776	protein_coding	Colec12	intron	ENSMUSG00000036103	ProperStrand	8	chr11	6428105	6428154	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-7.1562
chr4	137075669	137075873	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	chr4	116828379	116828451	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-3.3352
chr13	20564016	20564034	protein_coding	Elmo1	intron	ENSMUSG00000041112	NonProperStrand	34	chr16	23111371	23111434	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.1231
chr13	96100508	96100728	protein_coding	Zbed3	intron	ENSMUSG00000041995	ProperStrand	33	chr13	96100595	96100695	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	6	-19.3469
chr5	74489202	74489326	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr1	88247743	88247859	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	17	-10.8522
chr14	108986504	108986521	LTR	MTE-int	MaLR	chr14MTE-int108986408	ProperStrand	32	chr6	117873915	117873944	protein_coding	Hnrnpf	exon	ENSMUSG00000042079	ProperStrand	147	1	-12.7860
chr6	122273104	122273194	protein_coding	Phc1	exon	ENSMUSG00000040669	ProperStrand	158	chrX	155990018	155990098	protein_coding	A830080D01Rik	exon	ENSMUSG00000044150	ProperStrand	102	1	-10.3043
chr17	25217570	25217587	protein_coding	Ift140	intron	ENSMUSG00000024169	ProperStrand	25	chr1	162965980	162966006	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-5.2802
chr2	152163523	152163539	protein_coding	Trib3	utr3	ENSMUSG00000032715	NonProperStrand	46	chr7	116663633	116663693	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.9772
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr7	133726521	133726538	protein_coding	Cln3	exon	ENSMUSG00000030720	ProperStrand	87	1	-7.0555
chr4	133163830	133163903	protein_coding	Zdhhc18	utr3	ENSMUSG00000037553	ProperStrand	51	chr10	62228325	62228361	snoRNA	ENSMUSG00000080469_Snord98	.	ENSMUSG00000080469	ProperStrand	124	2	-20.0465
chr13	96102562	96102616	protein_coding	Zbed3	intron	ENSMUSG00000041995	ProperStrand	33	chr7	29136590	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-8.6159
chr7	16524110	16524200	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	chr18	35714182	35714262	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	3	-2.4155
chr17	24665420	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	chr17	35087895	35087964	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	8	-1.1030
chr14	55195352	55195389	protein_coding	Jub	exon	ENSMUSG00000022178	ProperStrand	25	chr2	93633270	93633286	protein_coding	Ext2	intron	ENSMUSG00000027198	ProperStrand	49	1	-15.5001
chr16	18582909	18583007	protein_coding	Tbx1	exon	ENSMUSG00000009097	ProperStrand	3	chr11	69483136	69483186	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-8.5256
chr15	85716219	85716239	protein_coding	Trmu	intron	ENSMUSG00000022386	NonProperStrand	2	chr17	24857727	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-inf
chr10	7324106	7324125	protein_coding	Lrp11	exon	ENSMUSG00000019796	ProperStrand	12	chr9	110556057	110556073	protein_coding	Nbeal2	intron	ENSMUSG00000056724	ProperStrand	161	1	-14.6134
chr2	35575612	35575702	protein_coding	Dab2ip	exon	ENSMUSG00000026883	ProperStrand	93	chr11	97642997	97643077	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.7575
chr4	13095284	13095303	LINE	L1_Mur2	L1	chr4L1_Mur213095169	ProperStrand	1	chr4	131865855	131865957	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr10	89282305	89282321	protein_coding	Uhrf1bp1l	utr3	ENSMUSG00000019951	NonProperStrand	55	chr13	49779667	49779745	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-7.1866
chr11	94335392	94335408	protein_coding	Cacna1g	utr5	ENSMUSG00000020866	ProperStrand	35	chr4	131908687	131908797	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-3.6928
chr9	26906297	26906313	protein_coding	Jam3	exon	ENSMUSG00000031990	ProperStrand	30	chr19	8963111	8963185	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.5028
chrX	166421697	166421742	protein_coding	Mid1	intron	ENSMUSG00000035299	ProperStrand	209	chr11	69481334	69481429	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	4	-5.2074
chr7	144387249	144387267	protein_coding	Ebf3	utr3	ENSMUSG00000010476	ProperStrand	9	chr5	74489595	74489678	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	2	-12.2490
chr10	127480574	127480590	protein_coding	Naca	exon	ENSMUSG00000061315	NonProperStrand	13	chr18	75160711	75160741	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	1	-12.3024
chr15	99234954	99236186	protein_coding	Tmbim6	exon	ENSMUSG00000023010	ProperStrand	64	chr5	125902488	125902536	protein_coding	Dhx37	exon	ENSMUSG00000029480	ProperStrand	15	2	-19.5824
chr11	97027422	97028926	protein_coding	Kpnb1	exon	ENSMUSG00000001440	ProperStrand	197	chr12	112779190	112779280	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-2.5898
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	42225881	42225897	protein_coding	Marveld1	utr3	ENSMUSG00000044345	NonProperStrand	112	1	-3.2980
chr15	94031008	94031026	LINE	L1ME1	L1	chr15L1ME194030946	ProperStrand	3	chr11	69483192	69483282	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-8.5256
chr15	10608097	10608128	protein_coding	Rai14	intron	ENSMUSG00000022246	ProperStrand	180	chr14	34780585	34780702	protein_coding	Zfp488	utr3	ENSMUSG00000044519	ProperStrand	54	6	-20.1256
chr3	107990632	107990650	protein_coding	Amigo1	exon	ENSMUSG00000050947	ProperStrand	22	chr2	158182201	158182279	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-6.9878
chr11	116535914	116535982	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr4	131399490	131399506	protein_coding	Mecr	exon	ENSMUSG00000028910	NonProperStrand	109	1	-4.7501
chr2	90235292	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	162968213	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	8	-3.6057
chr5	58109347	58109364	protein_coding	Pcdh7	utr5	ENSMUSG00000029108	ProperStrand	8	chr4	131908236	131908332	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-5.0428
chr7	133701300	133702209	protein_coding	Eif3c	exon	ENSMUSG00000030738	ProperStrand	92	chr1	162968451	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-5.2429
chr3	157197406	157197432	protein_coding	Zranb2	exon	ENSMUSG00000028180	ProperStrand	43	chr1	162967514	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-6.8835
chr2	140081090	140082721	protein_coding	Sel1l2	exon	ENSMUSG00000074764	NonProperStrand	52	chr4	131865855	131865969	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	15	-inf
chrX	130496426	130496668	protein_coding	Sytl4	exon	ENSMUSG00000031255	ProperStrand	169	chr4	116828423	116828453	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-6.3265
chr4	55431651	55431669	lincRNA	Gm12505	exon	ENSMUSG00000087070	ProperStrand	447	chr13	49779668	49779802	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-3.1660
chr9	104130891	104131079	protein_coding	Dnajc13	exon	ENSMUSG00000032560	ProperStrand	60	chr1	162967492	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-3.4744
chr12	95082354	95082372	LINE	Lx2	L1	chr12Lx295081662	ProperStrand	1	chr2	26494777	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-inf
chr17	37343741	37343831	LINE	L1ME1	L1	chr17L1ME137343750	ProperStrand	1	chr17	37343634	37343724	SINE	RSINE1	B4	chr17RSINE137343543	NonProperStrand	1	1	-inf
chr4	43505795	43505930	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr11	98764508	98764528	protein_coding	Wipf2	utr3	ENSMUSG00000038013	ProperStrand	30	7	-inf
chr2	160809443	160809534	protein_coding	Chd6	exon	ENSMUSG00000057133	ProperStrand	104	chr11	62418027	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	6	-inf
chr3	96654255	96654271	protein_coding	Pdzk1	exon	ENSMUSG00000038298	ProperStrand	101	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-7.8857
chr5	118635064	118635080	protein_coding	Hrk	utr3	ENSMUSG00000046607	NonProperStrand	6	chr9	120037917	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-9.3918
chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	chr4	101181735	101181810	protein_coding	Dnajc6	intron	ENSMUSG00000028528	ProperStrand	10	1	-13.5410
chr3	89009743	89009759	protein_coding	Gba	exon	ENSMUSG00000028048	NonProperStrand	88	chr5	147646411	147646459	snoRNA	ENSMUSG00000077185_SNORD102	.	ENSMUSG00000077185	ProperStrand	142	1	-10.8144
chr3	103758111	103758201	protein_coding	Rsbn1	intron	ENSMUSG00000044098	NonProperStrand	17	chr3	103768807	103768887	protein_coding	Rsbn1	utr3	ENSMUSG00000044098	ProperStrand	32	1	-17.0774
chr6	85412169	85414807	protein_coding	Cct7	exon	ENSMUSG00000030007	ProperStrand	173	chr2	158185554	158185651	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-4.4276
chr19	5842760	5842792	non_coding	Neat1	.	ENSMUSG00000092274	ProperStrand	63	chr7	29136621	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.2829
chr4	33335164	33335254	protein_coding	Pnrc1	exon	ENSMUSG00000040128	ProperStrand	27	chr1	88252837	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-8.2389
chr9	96218274	96218327	protein_coding	Tfdp2	exon	ENSMUSG00000032411	ProperStrand	95	chr5	74489543	74489644	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-2.9409
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr17	24857717	24857852	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	9	-3.6475
chr2	70927899	70927915	protein_coding	Dcaf17	exon	ENSMUSG00000041966	NonProperStrand	89	chr1	63225596	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-5.8905
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr4	128899207	128899254	protein_coding	C77080	exon	ENSMUSG00000050390	ProperStrand	48	1	-6.3440
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr8	69228390	69228406	protein_coding	Npy1r	exon	ENSMUSG00000036437	ProperStrand	13	1	-8.9859
chr1	75484537	75484553	protein_coding	Obsl1	exon	ENSMUSG00000026211	NonProperStrand	192	chr1	162967513	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-1.5192
chr10	86954437	86954462	protein_coding	Ascl1	utr3	ENSMUSG00000020052	NonProperStrand	1	chr9	15130700	15130767	snoRNA	ENSMUSG00000077506_Scarna9	.	ENSMUSG00000077506	ProperStrand	148	1	-inf
chr2	32881629	32881645	protein_coding	Garnl3	exon	ENSMUSG00000038860	NonProperStrand	54	chr4	122275457	122275491	pseudogene	Gm12877	.	ENSMUSG00000081377	NonProperStrand	16	1	-16.1991
chr6	129533250	129534178	protein_coding	Klre1	exon	ENSMUSG00000050241	NonProperStrand	20	chr17	24857799	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-7.2304
chr1	173166515	173166564	protein_coding	Ndufs2	exon	ENSMUSG00000013593	ProperStrand	32	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-8.1826
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr1	63225608	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	5	-3.8209
chr16	11144103	11144203	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr7	118219574	118219634	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	NonProperStrand	8	1	-14.5883
chr7	117166761	117166841	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	chr12	92811871	92811961	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	1	-0.8676
chr15	37981961	37981980	protein_coding	Ubr5	intron	ENSMUSG00000037487	NonProperStrand	8	chr1	120355715	120355750	snRNA	ENSMUSG00000080542_U4atac	.	ENSMUSG00000080542	ProperStrand	73	1	-16.9681
chr6	56828787	56828815	protein_coding	Fkbp9	utr3	ENSMUSG00000029781	ProperStrand	39	chr12	110892838	110892905	snoRNA	ENSMUSG00000064621_AF357355	.	ENSMUSG00000064621	ProperStrand	60	1	-14.1801
chr6	134387852	134387932	protein_coding	Bcl2l14	utr3	ENSMUSG00000030200	ProperStrand	5	chr1	89673638	89673728	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-8.2536
chr1	132588407	132588497	protein_coding	Pfkfb2	intron	ENSMUSG00000026409	ProperStrand	8	chr18	33954838	33954918	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-7.4981
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr3	34550233	34550333	protein_coding	Sox2	utr3	ENSMUSG00000074637	ProperStrand	299	1	-4.6464
chr15	78259253	78259269	protein_coding	Kctd17	exon	ENSMUSG00000033287	NonProperStrand	26	chr11	48614367	48614434	snoRNA	ENSMUSG00000064500_SNORD95	.	ENSMUSG00000064500	ProperStrand	100	1	-13.9841
chr6	5084611	5084686	protein_coding-noncoding	Ppp1r9a	utr3	ENSMUSG00000032827	ProperStrand	2	chr1	162968442	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	2	-inf
chr4	118954901	118954934	protein_coding	Ybx1	exon	ENSMUSG00000028639	ProperStrand	171	chr13	23831041	23831132	protein_coding	Hist1h1c	exon	ENSMUSG00000036181	ProperStrand	99	1	-10.2061
chr5	112865458	112865476	protein_coding	Sez6l	exon	ENSMUSG00000058153	ProperStrand	81	chr4	131908236	131908344	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-3.2502
chr1	185545465	185545482	LTR	ORR1D2	MaLR	chr1ORR1D2185545408	ProperStrand	12	chr6	85163812	85163860	protein_coding	Sfxn5	utr3	ENSMUSG00000033720	ProperStrand	26	1	-17.9842
chr18	86882304	86882322	protein_coding	Cbln2	utr5	ENSMUSG00000024647	ProperStrand	7	chr15	79908948	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	2	-15.7684
chr9	64023470	64023523	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	chr7	13880756	13880846	protein_coding	Lig1	exon	ENSMUSG00000056394	ProperStrand	89	1	-7.8914
chr11	3815349	3815439	SINE	B3	B2	chr11B33815294	NonProperStrand	1	chr11	3815495	3815585	SINE	B3	B2	chr11B33815501	NonProperStrand	1	1	-inf
chr1	167828267	167828284	protein_coding	Pou2f1	intron	ENSMUSG00000026565	NonProperStrand	33	chr4	131865380	131865403	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-5.1508
chr10	80829754	80829852	protein_coding	Fzr1	utr3	ENSMUSG00000020235	ProperStrand	26	chr16	23110966	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.2392
chr5	123608811	123608839	protein_coding	Setd1b	exon	ENSMUSG00000038384	ProperStrand	11	chr11	68886974	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	2	-12.1637
chrX	45626083	45626292	protein_coding	Utp14a	exon	ENSMUSG00000063785	ProperStrand	22	chr11	62416974	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	5	-inf
chr2	31889365	31889409	protein_coding	Nup214	exon	ENSMUSG00000001855	ProperStrand	62	chr4	151433407	151433423	protein_coding	Nol9	utr3	ENSMUSG00000028948	ProperStrand	93	1	-12.3669
chr17	74989009	74989088	protein_coding	Birc6	exon	ENSMUSG00000024073	ProperStrand	110	chr19	8798505	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-4.0514
chr4	124132209	124132225	lincRNA	1700057H15Rik	intron	ENSMUSG00000084757	ProperStrand	40	chr2	26494766	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.8534
chr1	182837005	182837052	protein_coding	Pycr2	exon	ENSMUSG00000026520	ProperStrand	89	chr7	116664826	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-5.2807
chr9	30939293	30939329	protein_coding	St14	utr5	ENSMUSG00000031995	ProperStrand	90	chr17	35088971	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-5.0769
chr3	113764346	113764363	protein_coding	Col11a1	utr5	ENSMUSG00000027966	NonProperStrand	139	chr4	131908686	131908774	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-0.7803
chr3	151849241	151849341	protein_coding	Dnajb4	intron	ENSMUSG00000028035	ProperStrand	6	chr11	77995189	77995220	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-10.9137
chr19	5798724	5798799	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr16	4039189	4039206	protein_coding	Dnase1	exon	ENSMUSG00000005980	NonProperStrand	17	1	-10.0949
chr4	102853012	102853030	protein_coding	Slc35d1	intron	ENSMUSG00000028521	ProperStrand	33	chr1	36203477	36203527	protein_coding	Uggt1	exon	ENSMUSG00000037470	ProperStrand	67	1	-14.2914
chr9	78023109	78023194	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr9	15119631	15119767	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	26	-3.3347
chr5	110769957	110770150	protein_coding	P2rx2	exon	ENSMUSG00000029503	ProperStrand	1	chr15	34370545	34370627	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-inf
chr13	55657473	55657514	protein_coding	Fam193b	utr5	ENSMUSG00000021495	ProperStrand	51	chr18	35714157	35714257	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-3.7436
chr16	13847840	13854495	protein_coding	Pdxdc1	exon	ENSMUSG00000022680	ProperStrand	26	chr18	35714144	35714245	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-5.0340
chr9	108319753	108319769	protein_coding	Ccdc36	exon	ENSMUSG00000047220	ProperStrand	4	chr17	28828536	28828552	protein_coding	Mapk14	utr5	ENSMUSG00000053436	ProperStrand	40	1	-19.1548
chr4	132382950	132382969	protein_coding	Ppp1r8	utr3	ENSMUSG00000028882	ProperStrand	13	chr4	131908236	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.0703
chr2	92440278	92440296	protein_coding	Chst1	utr5	ENSMUSG00000027221	ProperStrand	17	chr16	23110960	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.8783
chr12	110132336	110132352	protein_coding	Wars	utr5	ENSMUSG00000021266	NonProperStrand	4	chr19	8963027	8963115	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-7.6308
chr14	76247755	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	chr7	67123740	67123759	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	1	-1.0460
chr2	26493406	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr2	25947613	25947629	protein_coding	Nacc2	utr5	ENSMUSG00000026932	NonProperStrand	15	1	-8.9866
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr13	112278554	112278570	protein_coding	Gpbp1	utr5	ENSMUSG00000032745	ProperStrand	85	1	-5.2231
chr1	153602594	153602610	protein_coding	Edem3	utr5	ENSMUSG00000043019	ProperStrand	84	chr19	8798740	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	4	-13.3872
chrX	71517838	71517962	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	chr11	69483136	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	17	-1.5374
chr9	112088270	112088424	protein_coding-noncoding	Arpp21	utr3	ENSMUSG00000032503	ProperStrand	28	chr1	34229870	34230977	protein_coding	Dst	exon	ENSMUSG00000026131	ProperStrand	461	1	-10.7693
chr7	24779190	24779213	SINE	ID_B1	B4	chr7ID_B124779183	NonProperStrand	54	chr15	77597977	77597993	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	1	-9.0193
chr13	43763604	43763638	protein_coding	Rnf182	exon	ENSMUSG00000044164	ProperStrand	4	chr4	131908689	131908753	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-10.6778
chr16	15729933	15729949	protein_coding	Prkdc	exon	ENSMUSG00000022672	ProperStrand	22	chr4	131908687	131908722	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.8292
chr18	78016407	78017233	protein_coding	Atp5a1	exon	ENSMUSG00000025428	ProperStrand	254	chr7	117190026	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	5	-6.3214
chr11	78571424	78571444	SINE	ID_B1	B4	chr11ID_B178571346	ProperStrand	1	chr19	10949722	10949772	protein_coding	Tmem109	intron	ENSMUSG00000034659	ProperStrand	2	1	-inf
chr9	78023142	78023209	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr5	138608617	138608655	protein_coding	Mcm7	exon	ENSMUSG00000029730	ProperStrand	258	4	-10.6023
chr18	7917643	7917660	protein_coding	Wac	exon	ENSMUSG00000024283	ProperStrand	38	chr8	123192236	123193244	protein_coding	Cox4i1	utr5	ENSMUSG00000031818	ProperStrand	31	2	-19.8737
chr2	90235316	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr13	34744200	34744217	protein_coding	1300014I06Rik	exon	ENSMUSG00000021411	ProperStrand	7	1	-8.8025
chr5	122246401	122262658	protein_coding	Atxn2	intron	ENSMUSG00000042605	ProperStrand	83	chr4	131908720	131908885	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-4.0582
chr2	157819197	157819213	protein_coding	Tti1	exon	ENSMUSG00000027650	NonProperStrand	3	chr4	68423440	68423456	protein_coding	Dbc1	exon	ENSMUSG00000028351	ProperStrand	78	1	-19.7305
chrX	96662716	96662769	protein_coding	Pja1	exon	ENSMUSG00000034403	ProperStrand	6	chr16	23111374	23111464	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-9.1716
chr4	40208167	40208191	protein_coding	Topors	exon	ENSMUSG00000036822	ProperStrand	40	chr12	109154504	109154520	protein_coding	Bcl11b	exon	ENSMUSG00000048251	ProperStrand	14	1	-17.2338
chr2	121867382	121873212	protein_coding	Eif3j	exon	ENSMUSG00000027236	ProperStrand	15	chr7	116663651	116663741	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-5.1056
chr5	121655027	121655154	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	chr4	131865381	131865506	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	29	-1.3456
chr4	114677584	114679397	protein_coding	Stil	exon	ENSMUSG00000028718	ProperStrand	16	chr11	58115995	58116020	tRNA	tRNA1911-LeuCAA	.	38905	ProperStrand	165	3	-19.1131
chr5	109124122	109132306	protein_coding	Fgfrl1	exon	ENSMUSG00000008090	ProperStrand	111	chr17	35089181	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-4.3001
chr16	23973010	23973110	protein_coding	Bcl6	exon	ENSMUSG00000022508	ProperStrand	4	chr7	29136632	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-7.7378
chr17	45705305	45705412	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr5	122304436	122304453	protein_coding	Fam109a	utr3	ENSMUSG00000044134	ProperStrand	12	2	-15.8955
chr11	50111678	50112660	protein_coding	Canx	exon	ENSMUSG00000020368	ProperStrand	296	chr1	162966189	162966269	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-4.4554
chr4	131908232	131908260	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-1.1827
chr8	108233712	108233729	protein_coding	4933405L10Rik	exon	ENSMUSG00000013158	ProperStrand	94	chr8	73419657	73419743	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.3472
chr13	20374830	20374847	protein_coding	Elmo1	exon	ENSMUSG00000041112	NonProperStrand	34	chr5	108334194	108334259	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-5.9306
chr3	140582151	140582241	LINE	Lx7	L1	chr3Lx7140581835	NonProperStrand	1	chr3	140582565	140582645	LTR	RMER19A	ERVK	chr3RMER19A140582424	ProperStrand	1	1	-inf
chr17	25047093	25047132	protein_coding	Mapk8ip3	intron	ENSMUSG00000024163	ProperStrand	10	chr17	24857716	24857775	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-5.6778
chr6	94776857	94776875	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	chr9	64022854	64022923	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-3.9258
chr11	116535465	116535532	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr7	103956855	103956872	protein_coding	Odz4	intron	ENSMUSG00000048078	ProperStrand	93	1	-5.0559
chr15	68012619	68012635	protein_coding	Zfat	exon	ENSMUSG00000022335	NonProperStrand	25	chr16	23110962	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.2939
chr2	25078779	25078807	protein_coding	Tubb4b	exon	ENSMUSG00000036752	ProperStrand	58	chr10	5989453	5989570	protein_coding	Akap12	utr3	ENSMUSG00000038587	ProperStrand	1008	3	-17.3164
chr5	31375988	31376027	protein_coding	Cad	exon	ENSMUSG00000013629	ProperStrand	260	chr3	85889227	85889257	protein_coding	Sh3d19	exon	ENSMUSG00000028082	ProperStrand	58	1	-10.4419
chr8	74843723	74843756	protein_coding	Klf2	exon	ENSMUSG00000055148	ProperStrand	82	chr17	25996060	25996076	protein_coding	Wdr90	exon	ENSMUSG00000073434	ProperStrand	91	2	-18.1486
chr2	72930882	72930932	protein_coding	Ola1	utr3	ENSMUSG00000027108	ProperStrand	17	chr3	88497885	88497981	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-10.0095
chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr11	80415108	80415125	protein_coding	Myo1d	exon	ENSMUSG00000035441	ProperStrand	144	2	-7.8491
chrX	103398216	103398580	protein_coding	Pgk1	exon	ENSMUSG00000062070	ProperStrand	484	chr7	150717320	150717410	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-1.7417
chr14	12863149	12863166	protein_coding	Ptprg	intron	ENSMUSG00000021745	ProperStrand	72	chr10	39978306	39978376	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-5.1047
chr3	157581421	157583024	protein_coding	Cth	exon	ENSMUSG00000028179	ProperStrand	14	chr4	131865957	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.3681
chrX	105504079	105504096	LTR	MERVL-int	ERVL	chrXMERVL-int105503972	ProperStrand	7	chr4	131865866	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.7768
chr5	92875347	92875364	protein_coding	Scarb2	exon	ENSMUSG00000029426	ProperStrand	30	chr2	26494775	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.4006
chr17	56594300	56594378	protein_coding	Ptprs	exon	ENSMUSG00000013236	ProperStrand	152	chr13	58494706	58495132	protein_coding	Hnrnpk	exon	ENSMUSG00000021546	ProperStrand	117	3	-19.8592
chr10	126773997	126774097	protein_coding	Gli1	intron	ENSMUSG00000025407	ProperStrand	48	chr5	130300499	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-7.4758
chr8	112206503	112206543	protein_coding	2400003C14Rik	exon	ENSMUSG00000031729	ProperStrand	30	chr10	75322521	75322561	protein_coding	Mif	exon	ENSMUSG00000033307	ProperStrand	146	1	-12.9310
chr4	155550549	155550568	protein_coding	Agrn	exon	ENSMUSG00000041936	ProperStrand	175	chr19	8963032	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-0.7538
chr5	110875543	110875562	protein_coding	Fbrsl1	intron	ENSMUSG00000043323	ProperStrand	131	chr8	98269959	98270082	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	2	-6.7779
chr1	167266915	167266940	protein_coding	Dcaf6	exon	ENSMUSG00000026571	ProperStrand	12	chr14	28294149	28294249	protein_coding	D14Abb1e	utr3	ENSMUSG00000040651	ProperStrand	49	8	-inf
chr1	75398936	75398952	protein_coding	Speg	exon	ENSMUSG00000026207	ProperStrand	42	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-9.6441
chr7	117166776	117166857	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	chr7	52381732	52381758	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	2	-0.8617
chr10	79584314	79584414	protein_coding	Stk11	intron	ENSMUSG00000003068	ProperStrand	24	chr19	8799835	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-6.7554
chr9	58553324	58553341	protein_coding	2410076I21Rik	intron	ENSMUSG00000074269	NonProperStrand	10	chr4	131865856	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.0395
chr11	115105330	115105358	protein_coding	Tmem104	exon	ENSMUSG00000045980	ProperStrand	4	chr16	23110828	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.6489
chr13	100478959	100479049	LINE	Lx9	L1	chr13Lx9100478514	NonProperStrand	1	chr13	100485835	100485925	LINE	Lx9	L1	chr13Lx9100485766	NonProperStrand	1	1	-inf
chr18	67985033	67985101	protein_coding	Cep192	intron	ENSMUSG00000024542	ProperStrand	59	chr13	49779758	49779803	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-7.0469
chr15	81867938	81870171	protein_coding	Xrcc6	exon	ENSMUSG00000022471	ProperStrand	34	chr12	17552950	17553040	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-6.2049
chr4	57706987	57707003	protein_coding	Palm2	intron	ENSMUSG00000090053	NonProperStrand	187	chr2	166890780	166890858	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	1	-8.1077
chr3	14588600	14588618	protein_coding	E2f5	intron	ENSMUSG00000027552	NonProperStrand	17	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-14.2512
chr17	24301169	24301259	protein_coding	Atp6v0c	utr3	ENSMUSG00000024121	ProperStrand	75	chr17	26338286	26338305	protein_coding	Arhgdig	utr5	ENSMUSG00000073433	NonProperStrand	1	1	-inf
chr9	20946657	20946757	protein_coding	Cdc37	exon	ENSMUSG00000019471	ProperStrand	97	chr19	8798769	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-3.8886
chr2	90235294	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	90730314	90730330	protein_coding	C1qtnf4	exon	ENSMUSG00000040794	ProperStrand	7	1	-8.8025
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr11	51394570	51394587	protein_coding	Col23a1	utr3	ENSMUSG00000063564	ProperStrand	16	1	-11.6098
chr14	25950672	25950762	Other	RMER1A	Other	chr14RMER1A25950345	ProperStrand	1	chr14	25950951	25951031	Other	RMER1B	Other	chr14RMER1B25950896	NonProperStrand	1	1	-inf
chr7	29186918	29188708	protein_coding	Samd4b	exon	ENSMUSG00000037513	ProperStrand	72	chr7	134671403	134671493	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	3	-16.7903
chr16	10088452	10088469	LTR	RMER10B	ERVL	chr16RMER10B10088331	NonProperStrand	14	chr18	73693164	73693186	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-8.4447
chr11	8392316	8392435	protein_coding	Tns3	exon	ENSMUSG00000020422	ProperStrand	81	chrX	96992719	96992736	pseudogene	Pcna-ps1	.	ENSMUSG00000083682	ProperStrand	6	1	-17.4331
chr11	19923461	19923561	protein_coding	Spred2	utr3	ENSMUSG00000045671	ProperStrand	106	chr17	39985592	39985665	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	3	-11.4102
chr2	90235298	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	143764763	143764780	protein_coding	Dstn	intron	ENSMUSG00000015932	NonProperStrand	7	1	-8.8025
chr19	39917317	39917333	protein_coding	Cyp2c69	utr3	ENSMUSG00000092008	NonProperStrand	83	chr4	131908357	131908410	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.9830
chr15	88994695	88994887	protein_coding	Plxnb2	exon	ENSMUSG00000036606	ProperStrand	119	chr7	116663748	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.4252
chr9	50816824	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	chr1	173461784	173461800	protein_coding	Itln1	exon	ENSMUSG00000038209	ProperStrand	1	1	-inf
chr3	88684242	88684322	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr4	86232350	86232440	snoRNA	ENSMUSG00000088958_Scarna8	.	ENSMUSG00000088958	ProperStrand	366	4	-12.2196
chr8	44381690	44381780	protein_coding	Zfp42	exon	ENSMUSG00000051176	ProperStrand	127	chr5	130295415	130295495	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-3.8184
chr5	75473198	75473215	protein_coding	Gsx2	utr3	ENSMUSG00000035946	ProperStrand	307	chr3	121154371	121154402	protein_coding	Cnn3	exon	ENSMUSG00000053931	ProperStrand	77	1	-9.5409
chr11	67167096	67167112	protein_coding	Myh13	exon	ENSMUSG00000060180	ProperStrand	145	chr11	69481433	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-1.7134
chr14	8767177	8768487	protein_coding	Flnb	exon	ENSMUSG00000025278	ProperStrand	124	chr2	158182201	158182277	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-3.6270
chr12	56937523	56937563	protein_coding	Brms1l	exon	ENSMUSG00000012076	ProperStrand	9	chr4	131866155	131866245	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-7.4218
chr17	36098969	36100110	protein_coding	Abcf1	exon	ENSMUSG00000038762	ProperStrand	206	chr11	69481054	69481199	protein_coding	Eif4a1	exon	ENSMUSG00000059796	ProperStrand	108	1	-9.6596
chr19	4425946	4426046	protein_coding	Rhod	utr3	ENSMUSG00000041845	ProperStrand	2	chr18	35716713	35716761	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-9.2832
chr9	3478275	3478323	protein_coding	Cwf19l2	utr3	ENSMUSG00000025898	ProperStrand	21	chr18	35714185	35714285	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-5.4554
chr7	148445943	148446033	protein_coding	Phrf1	exon	ENSMUSG00000038611	ProperStrand	86	chr19	8984021	8984101	protein_coding	Ganab	exon	ENSMUSG00000071650	ProperStrand	145	5	-19.8194
chr6	134029351	134029368	protein_coding	Etv6	intron	ENSMUSG00000030199	ProperStrand	46	chr5	108336374	108336455	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-5.3975
chr18	38749843	38749891	protein_coding	Spry4	exon	ENSMUSG00000024427	ProperStrand	24	chr2	91436297	91436336	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	2	-14.8346
chr7	134341340	134341357	protein_coding	Tbc1d10b	utr3	ENSMUSG00000042492	ProperStrand	187	chr10	114779567	114779615	protein_coding	Tmem19	exon	ENSMUSG00000069520	ProperStrand	24	1	-12.8888
chr13	93446548	93446565	protein_coding	Serinc5	intron	ENSMUSG00000021703	ProperStrand	57	chr5	123333422	123338542	protein_coding	Kdm2b	exon	ENSMUSG00000029475	ProperStrand	30	1	-14.8271
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr5	148113281	148113297	protein_coding	Cdx2	utr3	ENSMUSG00000029646	ProperStrand	276	1	-5.6943
chr12	17552947	17553049	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr7	52378415	52378447	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	1	-0.9986
chr4	131866205	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	chr12	110874223	110874290	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	4	-4.5446
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr9	120037915	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-2.0908
chr7	117166757	117166837	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	chr16	18240832	18240922	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	16	-19.4693
mmu-miR-6240	2	25	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr11	49074533	49074579	protein_coding	Mgat1	exon	ENSMUSG00000020346	ProperStrand	3	2	-20.6577
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr15	98350146	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	4	-2.6555
chr6	124810680	124810696	protein_coding	Gpr162	exon	ENSMUSG00000038390	NonProperStrand	40	chr15	79913322	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.3555
chr6	94776848	94776875	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	chr17	24665420	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-1.2905
chr2	84878597	84878654	protein_coding	Ssrp1	exon	ENSMUSG00000027067	ProperStrand	118	chr5	130300461	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	4	-5.9779
chr8	63828793	63828883	protein_coding	Sh3rf1	intron	ENSMUSG00000031642	NonProperStrand	7	chr8	63825950	63826040	protein_coding	Sh3rf1	intron	ENSMUSG00000031642	ProperStrand	50	1	-18.0851
chr4	64529622	64529643	LINE	L1Md_T	L1	chr4L1Md_T64522528	ProperStrand	1	chr14	33005161	33005236	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-inf
chr17	33805993	33807077	protein_coding	Hnrnpm	utr5	ENSMUSG00000059208	ProperStrand	56	chr7	134671432	134671512	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-8.0098
chr2	158185554	158185615	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr16	71664143	71664170	snoRNA	ENSMUSG00000065924_SNORA71	.	ENSMUSG00000065924	ProperStrand	2	1	-13.9319
chr10	86156658	86168131	protein_coding	Hsp90b1	utr5	ENSMUSG00000020048	ProperStrand	396	chr19	8799831	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	2	-2.9752
chr17	69733521	69733600	protein_coding	Zfp161	utr5	ENSMUSG00000049672	ProperStrand	15	chr5	108336364	108336455	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	6	-inf
chr6	88847347	88847447	protein_coding	Mcm2	exon	ENSMUSG00000002870	ProperStrand	83	chr19	8800126	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-6.9625
chr4	27392756	27392774	LTR	RLTR20B3	ERVK	chr4RLTR20B327392506	ProperStrand	2	chr11	104368523	104368603	protein_coding	Cdc27	exon	ENSMUSG00000020687	ProperStrand	24	1	-inf
chr11	84646299	84646319	protein_coding	Ggnbp2	utr3	ENSMUSG00000020530	ProperStrand	30	chr9	120037898	120037975	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-6.0623
chr2	75501660	75501763	protein_coding	Hnrnpa3	exon	ENSMUSG00000059005	ProperStrand	289	chr7	52381975	52382010	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-3.6814
chr3	87717999	87718089	protein_coding	Hdgf	exon	ENSMUSG00000004897	ProperStrand	117	chr12	106269365	106269445	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	2	-5.0465
chr11	32105606	32105625	protein_coding	Snrnp25	utr5	ENSMUSG00000040767	NonProperStrand	1	chr11	62416951	62416992	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-inf
chr1	162967489	162967566	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	chr3	95980322	95980413	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	7	-0.9268
chr11	23416352	23416369	protein_coding	1700093K21Rik	utr3	ENSMUSG00000020286	ProperStrand	2	chr7	29136536	29136567	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-9.5181
chr11	97043041	97043066	protein_coding	Kpnb1	exon	ENSMUSG00000001440	ProperStrand	197	chr17	31722744	31722760	protein_coding	Pknox1	intron	ENSMUSG00000006705	ProperStrand	110	1	-9.7121
chr4	43505735	43505825	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr6	67221237	67221256	protein_coding	Serbp1	exon	ENSMUSG00000036371	ProperStrand	261	1	-0.8222
chr4	151734979	151734997	protein_coding	Chd5	exon	ENSMUSG00000005045	ProperStrand	51	chr5	121749497	121749523	protein_coding	Gm15800	exon	ENSMUSG00000042744	ProperStrand	47	1	-14.1433
chr10	79879959	79880062	protein_coding	Tcf3	exon	ENSMUSG00000020167	NonProperStrand	24	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-10.0279
chr6	124664862	124664887	protein_coding	Phb2	exon	ENSMUSG00000004264	ProperStrand	43	chr4	63389602	63389618	protein_coding	Tnfsf15	utr3	ENSMUSG00000050395	NonProperStrand	121	1	-12.5774
chr5	65952377	65952395	protein_coding	Ube2k	intron	ENSMUSG00000029203	ProperStrand	289	chr15	82980082	82980191	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	2	-6.8364
chr14	76247712	76247802	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	chr1	145626057	145626139	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	2	-1.3441
chr13	68759738	68764669	protein_coding	Adcy2	exon	ENSMUSG00000021536	ProperStrand	237	chrX	148354576	148354658	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	1	-6.3350
chr18	63109676	63109692	protein_coding	Apcdd1	exon	ENSMUSG00000071847	NonProperStrand	254	chr10	23506322	23506347	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-4.1443
chr2	29595742	29595842	protein_coding	Rapgef1	utr3	ENSMUSG00000039844	ProperStrand	58	chr2	130103786	130103825	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-8.5395
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr2	26493366	26493497	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	7	-6.4163
chr4	118293979	118294004	protein_coding	Ebna1bp2	exon	ENSMUSG00000028729	ProperStrand	18	chr8	129468746	129468868	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	2	-11.0064
chr8	73034171	73034262	protein_coding	Uba52	utr5	ENSMUSG00000090137	ProperStrand	37	chr16	23110918	23110961	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-2.7473
chr1	152260865	152260896	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	chr15	103070949	103071547	protein_coding	Hnrnpa1	exon	ENSMUSG00000046434	ProperStrand	68	1	-8.6573
chr15	52904849	52904866	protein_coding	Ext1	exon	ENSMUSG00000061731	ProperStrand	24	chr11	69481432	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-4.9335
chr19	4787886	4787976	protein_coding	Rbm14	exon	ENSMUSG00000006456	ProperStrand	84	chr5	111121065	111121145	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-5.7720
chr2	129004103	129004121	antisense	AI847159	.	ENSMUSG00000084826	NonProperStrand	63	chr4	131865855	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.6928
chr9	22443184	22571894	protein_coding	Bbs9	intron	ENSMUSG00000035919	ProperStrand	51	chr8	129468744	129468796	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	3	-11.2484
chr2	69982864	69982886	protein_coding	Myo3b	intron	ENSMUSG00000042064	NonProperStrand	16	chr5	135529869	135529988	snoRNA	ENSMUSG00000088008_SCARNA20	.	ENSMUSG00000088008	ProperStrand	139	1	-14.3072
chr1	39605588	39605678	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	chr17	35087894	35087926	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	4	-2.6577
chrX	116772297	116772319	LTR	LTRIS2	ERV1	chrXLTRIS2116771886	ProperStrand	1	chr2	130101971	130102021	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-inf
chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	chr8	73419657	73419765	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-1.5737
chr15	101083058	101083138	LTR	RMER15-int	ERVL	chr15RMER15-int101082749	ProperStrand	1	chr15	101083219	101083309	LTR	RMER15	ERVL	chr15RMER15101083125	ProperStrand	1	1	-inf
chr15	34370545	34370663	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	7	-0.6972
chr2	90235291	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	89368461	89368479	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	1	-1.8506
chr16	11144113	11144203	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr15	34370552	34370642	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	NonProperStrand	21	2	-19.0626
chr2	25078713	25078789	protein_coding	Tubb4b	exon	ENSMUSG00000036752	ProperStrand	58	chr5	130300529	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-6.7586
chr1	34282509	34282555	protein_coding	Dst	exon	ENSMUSG00000026131	ProperStrand	461	chr17	35087894	35087946	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-1.5764
chr11	100239685	100239737	protein_coding	Jup	exon	ENSMUSG00000001552	ProperStrand	123	chr3	108357255	108357358	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	2	-5.4899
chr4	21758690	21758724	protein_coding	Usp45	intron	ENSMUSG00000040455	ProperStrand	40	chr7	148634702	148634792	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	3	-11.3415
chr7	24779190	24779213	SINE	ID_B1	B4	chr7ID_B124779183	NonProperStrand	54	chr13	76341037	76341055	protein_coding	Fam81b	intron	ENSMUSG00000078966	NonProperStrand	220	1	-10.9200
chr14	33002423	33006596	protein_coding	Timm23	exon	ENSMUSG00000013701	ProperStrand	24	chr16	23111738	23111828	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.4982
chr14	76247141	76247166	protein_coding	Tpt1	exon	ENSMUSG00000060126	ProperStrand	236	chr8	124125927	124126010	protein_coding	Zcchc14	utr3	ENSMUSG00000061410	ProperStrand	22	1	-12.5988
chr1	121368189	121368289	protein_coding	Ralb	utr3	ENSMUSG00000004451	ProperStrand	17	chr15	79913288	79913310	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-6.0370
chr13	41096381	41096452	lincRNA	A730081D07Rik	intron	ENSMUSG00000086693	NonProperStrand	2	chr5	137806692	137806736	protein_coding	Ephb4	exon	ENSMUSG00000029710	ProperStrand	49	2	-inf
chrX	72214248	72214264	protein_coding-noncoding	Gab3	utr3	ENSMUSG00000032750	ProperStrand	420	chr3	103718462	103718481	protein_coding	Rsbn1	exon	ENSMUSG00000044098	NonProperStrand	17	1	-11.9763
chr11	100831499	100831598	protein_coding	Ptrf	exon	ENSMUSG00000004044	ProperStrand	14	chr10	23506278	23506303	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-9.8925
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr4	116827140	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-1.2615
chr9	20722361	20722378	protein_coding	Dnmt1	exon	ENSMUSG00000004099	ProperStrand	91	chr5	115939513	115939613	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-7.0362
chr19	6058544	6059354	protein_coding	Fau	exon	ENSMUSG00000038274	ProperStrand	64	chrX	34622942	34623022	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-3.0550
chrX	101017112	101017128	protein_coding	Slc16a2	exon	ENSMUSG00000033965	ProperStrand	35	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.6607
chr6	136610268	136610286	protein_coding	Plbd1	utr5	ENSMUSG00000030214	NonProperStrand	5	chr19	8963042	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-7.1260
chr17	67712818	67712835	LTR	ORR1E	MaLR	chr17ORR1E67712788	ProperStrand	39	chr5	122904841	122904894	protein_coding	Atp2a2	intron	ENSMUSG00000029467	ProperStrand	166	1	-12.1403
chr7	117452472	117452574	protein_coding	Sbf2	utr3	ENSMUSG00000038371	ProperStrand	17	chr1	74863311	74863355	tRNA	tRNA1392-GlyGCC	.	1572758	ProperStrand	10	1	-19.2790
chr6	52965701	52965718	protein_coding	Jazf1	intron	ENSMUSG00000063568	ProperStrand	43	chr11	6428088	6428154	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.8060
chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	chr11	62416951	62417013	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-2.5533
chrX	50600521	50600555	protein_coding	Fam122b	intron	ENSMUSG00000036022	ProperStrand	20	chr12	60141322	60141412	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	3	-20.3189
chr1	138071589	138071605	protein_coding	Kif21b	utr3	ENSMUSG00000041642	NonProperStrand	5	chr5	130300473	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-12.2420
chr11	49963348	49963385	protein_coding	Tbc1d9b	exon	ENSMUSG00000036644	ProperStrand	27	chr11	69483160	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.8930
chr5	124513124	124513142	protein_coding	Abcb9	intron	ENSMUSG00000029408	NonProperStrand	3	chr11	106362633	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-13.7636
chr14	76247711	76247821	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	chr3	153574607	153574651	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	1	-1.1338
chr8	10559591	10559608	protein_coding	Myo16	intron	ENSMUSG00000039057	ProperStrand	30	chr7	117190018	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.6386
chr4	116371862	116371914	protein_coding	Prdx1	utr3	ENSMUSG00000028691	ProperStrand	41	chr16	23111450	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.8215
chr8	13416897	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr3	59002460	59002477	protein_coding	Med12l	intron	ENSMUSG00000056476	NonProperStrand	5	1	-11.5948
chr1	59748815	59748857	snoRNA	ENSMUSG00000077345_Snord70	.	ENSMUSG00000077345	ProperStrand	61	chr3	68889029	68889145	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-3.2269
chr15	102041442	102041473	protein_coding	Zfp740	intron	ENSMUSG00000046897	ProperStrand	34	chr15	5068432	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	2	-11.5813
chr9	82723543	82723559	protein_coding	Irak1bp1	utr5	ENSMUSG00000032251	NonProperStrand	16	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-9.6527
chr9	110845681	110846724	protein_coding	Tdgf1	exon	ENSMUSG00000032494	ProperStrand	218	chr9	15118323	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-1.3314
chr2	145076803	145209255	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	chr2	26493366	26493466	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	5	-1.6268
chr11	107042248	107042338	protein_coding	Nol11	exon	ENSMUSG00000018433	ProperStrand	12	chr10	23505156	23505236	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.9771
chr1	158396858	158396907	protein_coding	Soat1	utr5	ENSMUSG00000026600	ProperStrand	21	chr3	123210854	123210889	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-6.6806
chr5	151755615	151755632	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr17	24343586	24343602	protein_coding	Ntn3	exon	ENSMUSG00000079662	ProperStrand	237	1	-5.0382
chr1	71644195	71651581	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr5	111121066	111121165	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	2	-2.7595
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr9	65127126	65127142	protein_coding	Cilp	exon	ENSMUSG00000042254	ProperStrand	212	1	-6.8551
chr7	133940235	133940378	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	chr15	79908984	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-1.1470
chr5	31361421	31361821	protein_coding	Cad	exon	ENSMUSG00000013629	ProperStrand	260	chr9	120037948	120038028	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-2.0657
chr4	103134236	103134254	lincRNA	Gm12718	intron	ENSMUSG00000086136	ProperStrand	10	chr4	116828397	116828453	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	2	-18.6930
chr11	78313939	78313956	protein_coding	Vtn	exon	ENSMUSG00000017344	ProperStrand	188	chr5	108334194	108334240	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-2.7101
chr13	6602000	6602025	protein_coding	Pfkp	exon	ENSMUSG00000021196	ProperStrand	197	chr4	41150095	41150164	snoRNA	ENSMUSG00000089265_SNORD121A	.	ENSMUSG00000089265	ProperStrand	370	2	-11.6993
chr4	137024785	137057014	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	chr6	99643306	99643322	protein_coding	Gpr27	exon	ENSMUSG00000072875	NonProperStrand	3	1	-14.4743
chr15	72951642	72976809	protein_coding	Eif2c2	exon	ENSMUSG00000036698	ProperStrand	154	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	7	-1.2052
chr13	54626067	54626084	protein_coding	4732471D19Rik	exon	ENSMUSG00000043183	NonProperStrand	18	chr11	106362605	106362636	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-9.8361
chr10	60783279	60783351	protein_coding	X99384	utr3	ENSMUSG00000020092	ProperStrand	60	chr1	95310104	95310128	protein_coding	Hdlbp	exon	ENSMUSG00000034088	ProperStrand	97	1	-12.3486
chr1	88931837	88931882	protein_coding	Dis3l2	intron	ENSMUSG00000053333	ProperStrand	20	chr4	116827121	116827160	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-9.2530
chr18	67943641	67944564	protein_coding	Seh1l	exon	ENSMUSG00000079614	ProperStrand	19	chr10	23505152	23505204	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.1073
chr5	149100499	149100516	protein_coding	Mtus2	exon	ENSMUSG00000029651	ProperStrand	114	chr9	120038466	120038488	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.9480
chr7	13516163	13516202	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	5	-3.0163
chr8	35202039	35203819	protein_coding	Leprotl1	exon	ENSMUSG00000031513	ProperStrand	7	chr7	117189961	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-7.5942
chr7	74879884	74879921	protein_coding	Synm	exon	ENSMUSG00000030554	ProperStrand	15	chr15	79913288	79913336	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-6.2900
chr9	114649230	114655622	protein_coding	Cmtm6	exon	ENSMUSG00000032434	ProperStrand	24	chr2	144087323	144087366	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-8.3819
chr18	60975755	60975855	protein_coding	Tcof1	utr3	ENSMUSG00000024613	ProperStrand	68	chr1	162967492	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-3.2459
chr16	87419194	87419296	snoRNA	ENSMUSG00000065647_SNORA2	.	ENSMUSG00000065647	ProperStrand	123	chr10	23505559	23505596	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	2	-9.9419
chrX	91435155	91435177	protein_coding	Eif2s3x	utr3	ENSMUSG00000035150	NonProperStrand	83	chr19	8963087	8963187	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.7527
chr16	85795631	85795647	protein_coding	Adamts1	utr3	ENSMUSG00000022893	ProperStrand	102	chr7	118219704	118219742	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-3.1883
chr2	26203131	26203147	protein_coding	Gpsm1	utr3	ENSMUSG00000026930	ProperStrand	93	chr5	116013389	116013412	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	1	-9.2694
chr7	52382275	52382314	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	chr12	106269316	106269406	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	2	-0.8639
chr6	142871004	142871104	protein_coding	St8sia1	intron	ENSMUSG00000030283	ProperStrand	42	chr7	150717298	150717350	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-6.2088
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr10	18393547	18393563	protein_coding	D10Bwg1379e	intron	ENSMUSG00000019852	NonProperStrand	120	1	-7.3333
chr11	105796301	105796401	protein_coding	Cyb561	utr3	ENSMUSG00000019590	ProperStrand	13	chr16	23111451	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.8569
chr3	85918732	85918822	protein_coding	Sh3d19	exon	ENSMUSG00000028082	ProperStrand	58	chr4	131865853	131865943	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-3.3377
chr3	45780645	45780665	LINE	Lx2B	L1	chr3Lx2B45780445	ProperStrand	34	chr15	93228742	93228764	protein_coding	Zcrb1	utr5	ENSMUSG00000022635	NonProperStrand	1	1	-inf
chr5	30084342	30084358	protein_coding	Dnajb6	exon	ENSMUSG00000029131	ProperStrand	81	chr3	123210929	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.5972
chr5	140536662	140536762	protein_coding	Mad1l1	intron	ENSMUSG00000029554	ProperStrand	69	chr7	29136619	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.1324
chr10	126730980	126731045	protein_coding-noncoding	Ddit3	utr5	ENSMUSG00000025408	NonProperStrand	13	chr2	26493406	26493506	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	13	-inf
chrX	162878276	162878292	protein_coding	Ofd1	utr5	ENSMUSG00000040586	NonProperStrand	11	chr16	90386835	90386853	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	1	-15.7081
chr3	137811376	137811396	protein_coding	Rg9mtd2	exon	ENSMUSG00000004127	ProperStrand	3	chr1	172612010	172612026	protein_coding	Olfml2b	exon	ENSMUSG00000038463	ProperStrand	57	1	-19.4146
chr9	64143735	64143753	protein_coding	Tipin	intron	ENSMUSG00000032397	ProperStrand	32	chr11	55296262	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	6	-20.2721
chr14	69442451	69442541	LTR	RMER17C	ERVK	chr14RMER17C69442431	NonProperStrand	1	chr14	69442240	69442330	SINE	MIRb	MIR	chr14MIRb69442256	NonProperStrand	1	1	-inf
chr1	183042500	183044278	protein_coding	Nvl	exon	ENSMUSG00000026516	ProperStrand	89	chr18	80326920	80326941	protein_coding	Adnp2	exon	ENSMUSG00000053950	ProperStrand	36	2	-inf
chr19	42830137	42830195	protein_coding	Hps1	exon	ENSMUSG00000025188	ProperStrand	13	chr16	23111372	23111462	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.8569
chr5	31093938	31093956	protein_coding	Dpysl5	exon	ENSMUSG00000029168	NonProperStrand	38	chr11	102294589	102294607	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	1	-9.8129
chr2	154171683	154171700	protein_coding	Cdk5rap1	exon	ENSMUSG00000027487	ProperStrand	75	chr8	122129036	122129052	protein_coding	Taf1c	utr5	ENSMUSG00000031832	ProperStrand	26	1	-14.5519
chr11	68805232	68805409	protein_coding	Pfas	exon	ENSMUSG00000020899	ProperStrand	53	chr11	68886941	68887021	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-4.3796
chr2	179322379	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr6	115400743	115400762	protein_coding	Pparg	intron	ENSMUSG00000000440	NonProperStrand	3	1	-17.6500
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr12	88778723	88778762	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-1.6271
chr2	143780927	143782504	protein_coding	Rrbp1	exon	ENSMUSG00000027422	ProperStrand	76	chr7	30168365	30171127	protein_coding	Sipa1l3	utr5	ENSMUSG00000030583	ProperStrand	559	2	-13.3293
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr19	8800375	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-0.7071
chr9	21572843	21572907	protein_coding	Kank2	utr3	ENSMUSG00000032194	ProperStrand	196	chr6	115758029	115758119	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-3.2344
chr8	13014869	13014885	protein_coding	Mcf2l	exon	ENSMUSG00000031442	NonProperStrand	35	chr8	98270014	98270096	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-6.6063
chr5	34112034	34112050	protein_coding	Letm1	exon	ENSMUSG00000005299	NonProperStrand	145	chr10	90432660	90432676	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	1	-8.8508
chr14	122373357	122373375	protein_coding	Ubac2	intron	ENSMUSG00000041765	ProperStrand	25	chr17	13115666	13115733	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	1	-9.2955
chr9	20726567	20726607	protein_coding	Dnmt1	exon	ENSMUSG00000004099	ProperStrand	91	chr5	27342758	27342776	protein_coding	Dpp6	intron	ENSMUSG00000061576	ProperStrand	35	1	-13.5678
chr5	123228708	123228726	protein_coding	Camkk2	intron	ENSMUSG00000029471	NonProperStrand	3	chr17	27166876	27167621	protein_coding	Ggnbp1	exon	ENSMUSG00000048731	NonProperStrand	2	1	-inf
chr1	137304620	137305989	protein_coding	Ipo9	exon	ENSMUSG00000041879	ProperStrand	53	chr5	130300531	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-4.7650
chr3	54532581	54532671	protein_coding	Fam48a	utr3	ENSMUSG00000027751	NonProperStrand	3	chr3	54532729	54533119	protein_coding	Exosc8	exon	ENSMUSG00000027752	ProperStrand	8	1	-20.4785
chr10	86154439	86154895	protein_coding	Hsp90b1	exon	ENSMUSG00000020048	ProperStrand	396	chr7	83018097	83018197	protein_coding	Klhl25	utr3	ENSMUSG00000055652	ProperStrand	4	1	-15.1961
chr3	89749861	89749970	protein_coding	Atp8b2	exon	ENSMUSG00000060671	ProperStrand	140	chr5	130300521	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-3.6755
chr10	19967119	19967174	protein_coding	Mtap7	intron	ENSMUSG00000019996	ProperStrand	43	chr9	120039534	120039624	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-6.6388
chr10	127480574	127480590	protein_coding	Naca	exon	ENSMUSG00000061315	NonProperStrand	13	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-8.2652
chr17	71974713	71974783	protein_coding	Wdr43	exon	ENSMUSG00000041057	ProperStrand	70	chr10	23505152	23505215	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.0304
chr8	113695138	113696325	protein_coding	Glg1	exon	ENSMUSG00000003316	ProperStrand	83	chr3	123210875	123210955	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	7	-12.9130
chr14	34780838	34780928	protein_coding	Zfp488	utr3	ENSMUSG00000044519	ProperStrand	54	chr7	13178811	13178901	protein_coding	Vmn2r53	intron	ENSMUSG00000091797	ProperStrand	2	1	-inf
chr7	119748243	119748262	SINE	B4	B4	chr7B4119748188	ProperStrand	4	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-11.7931
chr5	23907915	23907931	protein_coding	Abcb8	exon	ENSMUSG00000028973	NonProperStrand	49	chr1	162968442	162968507	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-6.4794
chr15	37929733	37949022	protein_coding	Ubr5	exon	ENSMUSG00000037487	ProperStrand	258	chr4	131908689	131908807	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-1.1340
chr7	96553299	96553318	protein_coding	Fzd4	exon	ENSMUSG00000049791	ProperStrand	3	chr7	28065982	28066082	protein_coding	Numbl	exon	ENSMUSG00000063160	ProperStrand	35	2	-inf
chr13	67626516	67626555	protein_coding	Zfp58	intron	ENSMUSG00000071291	ProperStrand	1	chr16	23110966	23110985	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr14	119015661	119018184	protein_coding	Abcc4	exon	ENSMUSG00000032849	ProperStrand	137	chr11	97642979	97643008	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.1970
chr8	86459935	86459953	protein_coding	Lphn1	exon	ENSMUSG00000013033	ProperStrand	221	chr1	162965981	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-1.4174
chr4	137571671	137571689	protein_coding	Eif4g3	intron	ENSMUSG00000028760	NonProperStrand	28	chr16	23110828	23110874	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.1386
chr5	21154624	21154689	protein_coding	Armc10	intron	ENSMUSG00000038525	ProperStrand	61	chr16	23110940	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-2.2515
chr16	75761550	75765200	protein_coding	Hspa13	exon	ENSMUSG00000032932	NonProperStrand	57	chrX	98860049	98860066	protein_coding	Ogt	exon	ENSMUSG00000034160	ProperStrand	49	1	-13.8281
chr5	30501461	30501493	protein_coding	Hadhb	exon	ENSMUSG00000059447	ProperStrand	7	chr7	116663716	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-11.0058
chr18	45718263	45718280	protein_coding	Kcnn2	intron	ENSMUSG00000054477	ProperStrand	26	chr16	23111372	23111422	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.5788
chr13	46765144	46765160	protein_coding	C78339	exon	ENSMUSG00000069237	NonProperStrand	104	chr11	106362644	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-6.3145
chr9	66870981	66871059	protein_coding	Tpm1	utr3	ENSMUSG00000032366	ProperStrand	23	chr18	35714208	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-5.2752
chr10	23505549	23505593	protein_coding	Rps12	intron	ENSMUSG00000061983	ProperStrand	309	chr8	73419661	73419761	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-1.4096
chr13	19449826	19449869	protein_coding	Stard3nl	utr3	ENSMUSG00000003062	ProperStrand	8	chr11	6428077	6428156	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-16.7091
chr11	48615221	48615331	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	chr1	138382212	138382230	protein_coding	Kif14	intron	ENSMUSG00000041498	NonProperStrand	36	2	-17.0022
chr5	25314871	25314888	protein_coding	Actr3b	intron	ENSMUSG00000056367	ProperStrand	32	chr16	23110940	23110957	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.9664
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr13	15569895	15569913	protein_coding	Gli3	exon	ENSMUSG00000021318	ProperStrand	54	1	-8.0058
chr2	90235302	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	20031885	20031901	protein_coding	4933406P04Rik	utr5	ENSMUSG00000069713	NonProperStrand	2	1	-11.8388
chr5	28693034	28693057	protein_coding	Rbm33	intron	ENSMUSG00000048271	ProperStrand	78	chr4	120831915	120843268	protein_coding	Rlf	exon	ENSMUSG00000049878	ProperStrand	58	1	-12.8558
chr6	85388850	85388866	protein_coding	Smyd5	exon	ENSMUSG00000033706	NonProperStrand	30	chr1	89673631	89673731	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-4.5659
chr5	123905241	123905312	protein_coding	Mlxip	utr3	ENSMUSG00000038342	ProperStrand	21	chr16	23110857	23110947	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.5481
chr1	46085834	46085851	protein_coding	Gm4776	exon	ENSMUSG00000044457	ProperStrand	4	chr9	120037953	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-10.3050
chr2	163268043	163268061	protein_coding	Gdap1l1	intron	ENSMUSG00000017943	NonProperStrand	30	chr1	162965547	162965587	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.5795
chr10	90579746	90579817	protein_coding	Slc25a3	exon	ENSMUSG00000061904	ProperStrand	74	chr9	120037988	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-4.3050
chr12	83610272	83610290	LTR	RLTR31A_Mm	ERVK	chr12RLTR31A_Mm83609823	NonProperStrand	1	chr7	106749613	106749688	protein_coding	Arrb1	exon	ENSMUSG00000018909	ProperStrand	46	1	-inf
chr13	58229197	58229297	protein_coding	Hnrnpa0	exon	ENSMUSG00000007836	ProperStrand	110	chr2	158182239	158182279	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	14	-23.0925
chr19	43579408	43579425	protein_coding	Got1	intron	ENSMUSG00000025190	NonProperStrand	147	chr4	116828379	116828453	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	2	-10.6527
chr17	47741329	47743835	protein_coding	Bysl	exon	ENSMUSG00000023988	ProperStrand	48	chr16	23111447	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-2.9535
chr7	135849515	135849541	protein_coding	Mcmbp	intron	ENSMUSG00000048170	ProperStrand	87	chr11	106362296	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-5.1175
chr1	181320405	181320423	protein_coding	Smyd3	intron	ENSMUSG00000055067	NonProperStrand	190	chr5	115940306	115940406	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	1	-6.4451
chr7	151508254	151508270	protein_coding	Shank2	intron	ENSMUSG00000037541	NonProperStrand	17	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-8.3968
chr4	24555744	24555765	protein_coding	Klhl32	intron	ENSMUSG00000040387	ProperStrand	67	chr18	35714175	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	4	-11.0164
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr11	6519815	6519915	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-2.8241
chr7	53493835	53493851	protein_coding	Ush1c	utr5	ENSMUSG00000030838	NonProperStrand	62	chr5	130300419	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.4535
chr3	90139676	90139699	SINE	B3	B2	chr3B390139534	NonProperStrand	2	chr16	23111709	23111799	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-inf
chr3	123120446	123120463	SINE	RSINE1	B4	chr3RSINE1123120387	NonProperStrand	6	chr7	52382014	52382040	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-11.4519
chr11	68886928	68887018	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	chr9	40612118	40612164	snoRNA	ENSMUSG00000075924_Snord14d	.	ENSMUSG00000075924	ProperStrand	131	1	-2.7200
chr6	147040519	147040536	protein_coding	Klhdc5	exon	ENSMUSG00000040102	NonProperStrand	1	chr4	131865866	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr2	33875938	33875956	lincRNA	C230014O12Rik	exon	ENSMUSG00000087461	NonProperStrand	9	chr15	95050371	95050387	protein_coding	Nell2	utr3	ENSMUSG00000022454	ProperStrand	64	1	-16.9520
chr8	107117439	107117537	protein_coding	Pdp2	exon	ENSMUSG00000048371	ProperStrand	18	chr7	117190043	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-5.6444
chr5	67819226	67819306	lincRNA	Gm16714	intron	ENSMUSG00000085339	NonProperStrand	6	chr5	67818934	67819024	protein_coding	Bend4	utr5	ENSMUSG00000092060	ProperStrand	56	5	-18.8989
chr17	35647345	35647392	protein_coding	Pou5f1	exon	ENSMUSG00000024406	ProperStrand	104	chr10	23770362	23770378	protein_coding	Taar7f	exon	ENSMUSG00000060825	NonProperStrand	40	1	-13.0301
chr2	163979722	163979822	protein_coding	Stk4	utr3	ENSMUSG00000018209	ProperStrand	20	chr7	116663715	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.5385
chr2	126966433	126966523	protein_coding	Itpripl1	utr3	ENSMUSG00000074825	ProperStrand	22	chr7	29136547	29136627	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.1896
chr9	62992379	62992395	protein_coding	Skor1	exon	ENSMUSG00000022245	NonProperStrand	70	chr17	35087945	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-4.9015
chr3	66100724	66100740	protein_coding	Veph1	utr5	ENSMUSG00000027831	NonProperStrand	92	chr12	106269284	106269384	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-3.3462
chr11	79953530	79953612	protein_coding	1110002N22Rik	exon	ENSMUSG00000046909	ProperStrand	45	chr2	26494766	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	4	-12.1004
chr13	52742450	52742466	protein_coding	Syk	utr3	ENSMUSG00000021457	NonProperStrand	125	chr17	35089182	35089227	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-4.0760
chr11	109290376	109291019	protein_coding	Amz2	exon	ENSMUSG00000020610	ProperStrand	7	chr9	15119360	15119426	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-9.4755
chr7	151738340	151738392	protein_coding	Ppfia1	exon	ENSMUSG00000037519	ProperStrand	32	chr2	29014439	29014455	protein_coding	Setx	exon	ENSMUSG00000043535	ProperStrand	187	1	-12.3037
chr11	115449766	115449796	protein_coding	Gga3	exon	ENSMUSG00000020740	ProperStrand	44	chr8	26883767	26883783	protein_coding	Bag4	intron	ENSMUSG00000037316	NonProperStrand	14	1	-17.0140
chr9	55938652	55938671	protein_coding	Pstpip1	intron	ENSMUSG00000032322	ProperStrand	8	chr1	162965983	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-7.6037
chr11	62365845	62365935	protein_coding	Ubb	exon	ENSMUSG00000019505	ProperStrand	32	chr10	23505180	23505260	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.1928
chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	chr2	125454989	125455005	protein_coding	Shc4	utr3	ENSMUSG00000035109	ProperStrand	19	1	-11.7285
chr3	33945961	33946560	protein_coding	Fxr1	exon	ENSMUSG00000027680	ProperStrand	58	chr12	106269340	106269430	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	2	-7.0391
chr14	58426180	58426260	protein_coding	F630043A04Rik	utr3	ENSMUSG00000021965	ProperStrand	24	chr4	131865891	131865981	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.3401
chr18	58308741	58308758	protein_coding	Fbn2	utr5	ENSMUSG00000024598	ProperStrand	16	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-12.0541
chr4	86232352	86232370	protein_coding	Haus6	intron	ENSMUSG00000038047	ProperStrand	21	chr4	122968588	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-8.3853
chr16	20611752	20611768	protein_coding	Ece2	exon	ENSMUSG00000022842	NonProperStrand	4	chr8	32260335	32260385	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-10.2255
chr1	135153314	135153332	protein_coding	Plekha6	intron	ENSMUSG00000041757	ProperStrand	22	chr8	98270044	98270096	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-7.5392
chr8	122607237	122607356	protein_coding	Zdhhc7	intron	ENSMUSG00000031823	ProperStrand	12	chr19	17900101	17900117	snoRNA	ENSMUSG00000089540_snoU13	.	ENSMUSG00000089540	ProperStrand	99	1	-15.5950
chr8	126553727	126553750	protein_coding	Urb2	exon	ENSMUSG00000031976	ProperStrand	64	chr18	35716784	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.0639
chr17	72007005	72007023	protein_coding	Wdr43	utr3	ENSMUSG00000041057	ProperStrand	70	chr7	150717298	150717414	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	4	-16.0904
chr11	48613867	48613915	protein_coding	Gnb2l1	utr5	ENSMUSG00000020372	ProperStrand	347	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-3.8325
chr8	66578323	66578340	protein_coding	Tll1	intron	ENSMUSG00000053626	NonProperStrand	18	chr2	26493470	26493497	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-6.0815
chr7	51896470	51896509	protein_coding	Myh14	exon	ENSMUSG00000030739	ProperStrand	29	chr1	162965536	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.6451
chr13	114113333	114113350	protein_coding	BC067074	exon	ENSMUSG00000021763	NonProperStrand	62	chr4	116826699	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-6.7164
chr10	116488272	116490074	protein_coding	Cct2	utr3	ENSMUSG00000034024	ProperStrand	100	chr10	39978347	39978402	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-4.4733
chr5	65952377	65952395	protein_coding	Ube2k	intron	ENSMUSG00000029203	ProperStrand	289	chr9	65534372	65534423	pseudogene	Oaz2	.	ENSMUSG00000040652	ProperStrand	3	1	-16.5897
chr2	26056037	26056054	protein_coding	Lhx3	utr3	ENSMUSG00000026934	ProperStrand	4	chr16	48973420	48973538	protein_coding	Dzip3	intron	ENSMUSG00000064061	ProperStrand	10	1	-19.3291
chr13	12523255	12523983	protein_coding	Heatr1	exon	ENSMUSG00000050244	ProperStrand	74	chr2	26768403	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	11	-21.6184
chr5	115939502	115939602	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr11	74718931	74718962	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	1	-3.7060
chr5	110696158	110696174	antisense	Gm15788	.	ENSMUSG00000087439	ProperStrand	1	chr4	81936716	81936732	protein_coding	Nfib	utr3	ENSMUSG00000008575	NonProperStrand	10	1	-inf
chr14	64081494	64081513	protein_coding	Fam167a	utr3	ENSMUSG00000035095	ProperStrand	80	chr3	123210853	123210911	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.6158
chr11	60602757	60602806	protein_coding	Shmt1	exon	ENSMUSG00000020534	ProperStrand	60	chr16	23111451	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-2.4225
chr11	68184870	68184895	protein_coding	Ntn1	intron	ENSMUSG00000020902	ProperStrand	44	chr9	69972993	69973998	protein_coding	Fam81a	exon	ENSMUSG00000032224	ProperStrand	59	1	-13.9745
chr2	155923908	155923998	protein_coding	Rbm12	exon	ENSMUSG00000089824	ProperStrand	26	chr5	147646738	147646818	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	1	-9.6432
chr9	120037909	120037979	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	chr11	58115668	58115713	tRNA	tRNA1912-GluCTC	.	295598	ProperStrand	12	6	-20.4980
chr11	78086787	78086944	protein_coding	2610507B11Rik	exon	ENSMUSG00000010277	ProperStrand	246	chr13	14711668	14712996	protein_coding	Psma2	exon	ENSMUSG00000015671	ProperStrand	26	1	-12.1759
chr7	52472753	52487703	protein_coding	Tead2	exon	ENSMUSG00000030796	ProperStrand	39	chr10	23505152	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	10	-21.1116
chr7	51909335	51909368	protein_coding	Myh14	exon	ENSMUSG00000030739	ProperStrand	29	chr1	120733962	120734015	protein_coding	Gli2	exon	ENSMUSG00000048402	ProperStrand	148	1	-12.9716
chr8	83138737	83138753	protein_coding	Frem3	exon	ENSMUSG00000042353	NonProperStrand	53	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-3.8230
chr3	69121012	69121028	protein_coding	Ppm1l	utr5	ENSMUSG00000027784	ProperStrand	32	chr8	32260331	32260424	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-5.8566
chr5	4758088	4758104	protein_coding	Fzd1	utr5	ENSMUSG00000044674	ProperStrand	3	chr11	97642952	97643074	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-14.4739
chr16	35728071	35728115	protein_coding	Dirc2	intron	ENSMUSG00000022848	ProperStrand	17	chr9	15118346	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-9.6810
chr9	61762170	61762188	protein_coding	Rplp1	exon	ENSMUSG00000007892	ProperStrand	116	chr19	8798484	8798543	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	NonProperStrand	4	1	-17.6484
mmu-miR-1949	0	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr18	35714142	35714270	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	93	-19.7004
chr12	86359041	86359059	protein_coding	Ylpm1	intron	ENSMUSG00000021244	ProperStrand	100	chr1	34221273	34221974	protein_coding	Dst	exon	ENSMUSG00000026131	ProperStrand	461	1	-8.2085
chr5	107404868	107404907	protein_coding	Cdc7	intron	ENSMUSG00000029283	ProperStrand	3	chr4	131908809	131908891	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-12.0505
chr11	103547917	103547934	protein_coding	Gosr2	exon	ENSMUSG00000020946	NonProperStrand	2	chr5	123622050	123622066	protein_coding	Hpd	exon	ENSMUSG00000029445	ProperStrand	254	1	-17.8118
chr4	111289776	111289793	protein_coding	Agbl4	exon	ENSMUSG00000061298	NonProperStrand	33	chr12	106269284	106269384	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-5.2932
chr11	101466247	101466347	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	chr9	15119353	15119425	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-1.2525
chr1	135313156	135313278	protein_coding	Sox13	intron	ENSMUSG00000070643	ProperStrand	6	chr18	75161559	75161598	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-11.9490
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr14	93575981	93575998	protein_coding	Pcdh9	intron	ENSMUSG00000055421	ProperStrand	59	1	-8.9603
chr17	10409095	10409166	protein_coding	Qk	exon	ENSMUSG00000062078	ProperStrand	63	chr1	162967511	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	4	-11.4013
chr1	123224235	123224252	protein_coding	Insig2	utr5	ENSMUSG00000003721	ProperStrand	4	chr3	79223176	79223193	protein_coding	Gm17359	intron	ENSMUSG00000091685	NonProperStrand	50	1	-18.8519
chr19	37991217	37991233	protein_coding	Myof	intron	ENSMUSG00000048612	NonProperStrand	2	chrX	84483701	84483718	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-15.7471
chr17	33961248	33961415	protein_coding	Rps28	exon	ENSMUSG00000067288	ProperStrand	52	chr9	120038483	120038573	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	3	-8.3057
chr4	147840138	147840170	protein_coding	Mtor	exon	ENSMUSG00000028991	ProperStrand	65	chr7	117166825	117166857	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-4.6620
chrX	165695583	165695599	protein_coding	Arhgap6	exon	ENSMUSG00000031355	ProperStrand	74	chr16	23111689	23111757	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.5802
chr17	43011695	43011712	protein_coding	Cd2ap	intron	ENSMUSG00000061665	NonProperStrand	6	chr2	158182160	158182210	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-9.7005
chr7	74189892	74189909	protein_coding	Adamts17	intron	ENSMUSG00000058145	NonProperStrand	73	chr4	131865855	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-2.7711
chr13	13851131	13851147	protein_coding	Lyst	intron	ENSMUSG00000019726	ProperStrand	5	chr2	157119950	157120991	protein_coding	Rpn2	exon	ENSMUSG00000027642	ProperStrand	363	1	-14.8682
chr8	3616378	3618091	protein_coding	Xab2	exon	ENSMUSG00000019470	ProperStrand	52	chr11	102294589	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	1	-9.1809
chr17	45707345	45707445	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr11	117630790	117630823	protein_coding	Tmc6	exon	ENSMUSG00000025572	ProperStrand	60	1	-6.7300
chr4	140575720	140575759	protein_coding	Crocc	exon	ENSMUSG00000040860	ProperStrand	44	chr19	8798507	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-9.4954
chr13	9833560	9833669	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr1	157888048	157888100	protein_coding	Tor1aip2	utr5	ENSMUSG00000050565	ProperStrand	31	2	-10.1629
chr4	64963757	64963774	protein_coding	Pappa	intron	ENSMUSG00000028370	NonProperStrand	32	chr10	23506576	23506605	protein_coding	Rps12	exon	ENSMUSG00000061983	ProperStrand	309	1	-11.2980
chr17	45802450	45802466	antisense	Gm16172	.	ENSMUSG00000086472	ProperStrand	17	chr2	119593979	119595009	protein_coding	Rpap1	exon	ENSMUSG00000034032	ProperStrand	96	1	-14.9246
chr7	36388906	36389233	protein_coding	Ankrd27	exon	ENSMUSG00000034867	ProperStrand	132	chr12	85350481	85350499	protein_coding	Acot1	utr5	ENSMUSG00000072949	ProperStrand	72	1	-11.3634
chr9	110181516	110181606	LTR	MTD	MaLR	chr9MTD110181496	ProperStrand	1	chr9	110181799	110181879	LTR	MTD	MaLR	chr9MTD110181764	ProperStrand	1	1	-inf
chr12	17285688	17286416	protein_coding	Pdia6	exon	ENSMUSG00000020571	ProperStrand	114	chr2	130102031	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-4.1249
chr12	85013778	85013828	protein_coding	Rbm25	exon	ENSMUSG00000010608	ProperStrand	42	chr19	8798484	8798536	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-9.6356
chr6	87854154	87854849	protein_coding	Copg	exon	ENSMUSG00000030058	ProperStrand	68	chr14	33005125	33005190	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-3.7593
chr4	99768590	99768670	protein_coding	Ror1	utr5	ENSMUSG00000035305	ProperStrand	8	chr11	69481376	69481466	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-7.1653
chr8	72784603	72784673	protein_coding	Sugp2	utr3	ENSMUSG00000036054	ProperStrand	33	chr19	8963027	8963061	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-5.7142
chr7	130571623	130573664	protein_coding	Lcmt1	exon	ENSMUSG00000030763	ProperStrand	18	chr5	124860378	124863234	protein_coding	Sbno1	exon	ENSMUSG00000038095	ProperStrand	134	1	-14.1438
chr6	122664338	122664423	protein_coding	Nanog	utr3	ENSMUSG00000012396	ProperStrand	66	chr1	162965981	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	4	-11.5083
chr8	77634222	77634322	protein_coding	Mcm5	exon	ENSMUSG00000005410	ProperStrand	199	chr11	35696932	35696963	protein_coding	Wwc1	exon	ENSMUSG00000018849	ProperStrand	52	4	-19.5091
chr3	137849424	137849440	protein_coding	4930579F01Rik	utr5	ENSMUSG00000012042	NonProperStrand	156	chr13	58495862	58495911	protein_coding	Hnrnpk	exon	ENSMUSG00000021546	ProperStrand	117	1	-10.0550
chr8	72287172	72287188	protein_coding	Zfp866	utr3	ENSMUSG00000043090	NonProperStrand	134	chr7	38354919	38354935	protein_coding	Zfp536	exon	ENSMUSG00000043456	NonProperStrand	236	1	-8.9570
chr19	7054779	7054841	protein_coding	Fkbp2	intron	ENSMUSG00000056629	ProperStrand	18	chr7	3333272	3333289	protein_coding	Cacng7	intron	ENSMUSG00000069806	ProperStrand	29	1	-17.1594
chr17	24497192	24497209	protein_coding	Abca3	intron	ENSMUSG00000024130	ProperStrand	20	chr11	101327051	101327120	protein_coding	Vat1	exon	ENSMUSG00000034993	ProperStrand	69	1	-15.2544
chrX	148341503	148341530	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	1	-5.2901
chr13	6554670	6554702	protein_coding	Pitrm1	exon	ENSMUSG00000021193	ProperStrand	28	chr15	8952097	8956101	protein_coding	Ranbp3l	exon	ENSMUSG00000048424	ProperStrand	45	1	-15.4247
chr13	55391546	55391563	protein_coding	Nsd1	exon	ENSMUSG00000021488	ProperStrand	186	chr6	115757992	115758120	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-3.3291
chr5	28403350	28403440	protein_coding	Insig1	utr3	ENSMUSG00000045294	ProperStrand	35	chr19	8963027	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.2191
chr16	27446693	27446793	protein_coding	Ccdc50	utr3	ENSMUSG00000038127	ProperStrand	10	chr16	23110968	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-5.0079
chr6	125051968	125052206	protein_coding	Chd4	exon	ENSMUSG00000063870	ProperStrand	303	chr6	115758035	115758125	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	2	-4.3483
chr18	35714264	35714292	lincRNA	Snhg4	intron	ENSMUSG00000090430	ProperStrand	270	chr17	35646415	35646927	protein_coding	Pou5f1	exon	ENSMUSG00000024406	ProperStrand	104	1	-9.1952
chr10	127521440	127521474	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr8	46112120	46112136	protein_coding	Fat1	exon	ENSMUSG00000070047	ProperStrand	306	1	-5.4455
chr11	98878362	98878452	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	chr14	76372339	76372419	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	2	-4.0214
chr17	87198935	87198954	protein_coding	Epas1	intron	ENSMUSG00000024140	NonProperStrand	4	chr19	8799581	8799641	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	2	-inf
chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	chr11	101321097	101321178	protein_coding	Vat1	utr3	ENSMUSG00000034993	ProperStrand	69	1	-8.2245
chr14	20630779	20630828	protein_coding	Nid2	utr3	ENSMUSG00000021806	ProperStrand	372	chr4	96412508	96412526	protein_coding	Gm12695	intron	ENSMUSG00000078639	ProperStrand	110	1	-8.4448
chr10	28601202	28601219	pseudogene	4930519F09Rik	.	ENSMUSG00000090126	ProperStrand	1	chr4	131908689	131908741	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-inf
chr19	47333642	47333729	protein_coding	Neurl1a	utr3	ENSMUSG00000006435	ProperStrand	41	chr14	76247806	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-4.9022
chr7	52164634	52164690	protein_coding	Ap2a1	exon	ENSMUSG00000060279	ProperStrand	193	chr16	23111373	23111482	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	7	-3.8371
chr2	26493383	26493500	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr18	75160707	75160777	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	9	-10.6495
chr17	57035739	57036817	protein_coding	Mllt1	exon	ENSMUSG00000024212	NonProperStrand	2	chr16	11144141	11144231	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	1	-18.1559
chr17	35822057	35822257	protein_coding	Ddr1	exon	ENSMUSG00000003534	ProperStrand	129	chr4	131908689	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-2.4689
chr4	43505656	43505721	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr4	88056835	88056853	protein_coding	BC057079	utr3	ENSMUSG00000038368	ProperStrand	52	1	-3.3294
chr15	88957274	88957364	protein_coding-noncoding	Hdac10	utr3	ENSMUSG00000062906	NonProperStrand	1	chr15	88949804	88949894	protein_coding	Tubgcp6	intron	ENSMUSG00000051786	NonProperStrand	3	1	-inf
chr15	66461366	66461466	protein_coding	Phf20l1	exon	ENSMUSG00000072501	ProperStrand	13	chr9	15119722	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	4	-17.4079
chr4	139384557	139384576	protein_coding	Pax7	exon	ENSMUSG00000028736	ProperStrand	23	chr9	31019330	31019347	protein_coding	Aplp2	utr5	ENSMUSG00000031996	ProperStrand	172	1	-13.1393
chr9	64954192	64954209	protein_coding	Igdcc4	intron	ENSMUSG00000032816	ProperStrand	29	chr13	24923947	24923990	protein_coding	Tdp2	intron	ENSMUSG00000035958	ProperStrand	11	1	-18.1094
chr12	85292163	85292237	protein_coding	2410016O06Rik	exon	ENSMUSG00000046791	ProperStrand	27	chr16	23111394	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-4.4613
chr19	6372546	6373593	protein_coding	Sf1	exon	ENSMUSG00000024949	ProperStrand	251	chr19	8798775	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-2.2043
chr9	103978718	103978750	protein_coding	Acad11	utr3	ENSMUSG00000090150	ProperStrand	17	chr15	82980092	82980190	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	2	-15.3734
chrX	72355934	72355985	protein_coding	Mpp1	utr3	ENSMUSG00000031402	ProperStrand	1	chr18	33954900	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-inf
chr11	32608232	32611853	protein_coding	Fbxw11	exon	ENSMUSG00000020271	ProperStrand	36	chr12	60235047	60235125	protein_coding	Ctage5	intron	ENSMUSG00000021000	ProperStrand	35	1	-15.4465
chr6	130429896	130429912	LINE	Lx4B	L1	chr6Lx4B130429283	ProperStrand	12	chr11	69481340	69481428	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	5	-20.0201
chr9	122797609	122797626	lincRNA	A530083I20Rik	intron	ENSMUSG00000086343	ProperStrand	1	chr11	106362304	106362326	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-inf
chrX	20259603	20259693	protein_coding	Uba1	utr3	ENSMUSG00000001924	ProperStrand	156	chrX	34622941	34623021	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-1.5786
chr19	28606078	28606094	protein_coding	Glis3	exon	ENSMUSG00000052942	NonProperStrand	14	chr2	145077958	145209255	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-10.6760
chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	chr14	33005138	33005235	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	2	-4.4462
chr1	139084663	139084753	LINE	L1MD	L1	chr1L1MD139084628	ProperStrand	1	chr2	156896002	156896082	protein_coding	9830001H06Rik	intron	ENSMUSG00000055485	NonProperStrand	5	1	-inf
chrX	83547356	83547372	protein_coding	Mageb4	intron	ENSMUSG00000035427	NonProperStrand	191	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-3.0399
chr3	89212360	89212382	protein_coding	Flad1	exon	ENSMUSG00000042642	ProperStrand	7	chr16	23111709	23111755	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.9463
chr4	99577397	99577414	protein_coding	Itgb3bp	intron	ENSMUSG00000028549	ProperStrand	55	chr16	23110909	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-0.9304
chr10	62476508	62476534	protein_coding	Rufy2	utr3	ENSMUSG00000020070	ProperStrand	5	chr16	23111437	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-5.8178
chr5	114711196	114713018	protein_coding	Foxn4	exon	ENSMUSG00000042002	NonProperStrand	1	chr5	130300419	130300549	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-inf
chr16	12360074	12360092	LTR	IAPLTR2b	ERVK	chr16IAPLTR2b12359785	NonProperStrand	28	chr11	6428043	6428095	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.6242
chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	chr9	103950068	103950086	protein_coding	Uba5	intron	ENSMUSG00000032557	ProperStrand	111	1	-11.3308
chr13	29207761	29207851	LTR	MTEb	MaLR	chr13MTEb29207552	ProperStrand	1	chr13	29207920	29208000	LTR	ORR1E	MaLR	chr13ORR1E29207916	ProperStrand	1	1	-inf
chr15	85889272	85889291	protein_coding	Gramd4	utr5	ENSMUSG00000035900	ProperStrand	39	chr10	110918549	110918639	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-4.2557
chr14	76247711	76247847	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	chr17	24857715	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	57	-1.0886
chr10	79174543	79174633	protein_coding	Bsg	utr3	ENSMUSG00000023175	ProperStrand	107	chr3	68889060	68889140	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-2.2482
chr17	71202529	71202546	protein_coding	Tgif1	intron	ENSMUSG00000047407	NonProperStrand	3	chr2	26494773	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-9.2771
chr17	6942650	6942727	protein_coding	Ezr	utr3	ENSMUSG00000052397	ProperStrand	126	chr15	34370548	34370638	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-2.2430
chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	chr5	149211306	149211323	protein_coding	Slc7a1	utr5	ENSMUSG00000041313	NonProperStrand	4	1	-16.4424
chr8	31436465	31436482	LINE	Lx7	L1	chr8Lx731436390	ProperStrand	23	chr4	116828379	116828428	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-10.3187
chr18	10052129	10052153	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	2	-6.2853
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr7	136779014	136779091	protein_coding	Wdr11	utr3	ENSMUSG00000042055	ProperStrand	24	1	-8.2034
chr10	18147975	18147992	protein_coding	Nhsl1	intron	ENSMUSG00000039835	NonProperStrand	12	chr4	140274294	140276472	protein_coding	Rcc2	exon	ENSMUSG00000040945	ProperStrand	228	1	-13.9209
chr13	9833579	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr2	155241066	155241183	protein_coding	Ncoa6	exon	ENSMUSG00000038369	ProperStrand	12	1	-8.1774
chr14	63775529	63777886	protein_coding	Fdft1	exon	ENSMUSG00000021273	ProperStrand	37	chr7	117189944	117190024	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-7.1010
chr5	111085059	111085166	protein_coding	Ddx51	exon	ENSMUSG00000029504	ProperStrand	54	chr15	79913288	79913304	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-3.7880
chr11	105885602	105885692	protein_coding	Kcnh6	intron	ENSMUSG00000001901	NonProperStrand	1	chr11	51520101	51520181	protein_coding	Sec24a	intron	ENSMUSG00000036391	NonProperStrand	2	1	-inf
chr19	4923089	4923189	protein_coding	Dpp3	exon	ENSMUSG00000063904	ProperStrand	36	chr1	162966000	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-4.5692
chr14	15572355	15572371	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr19	8800357	8800447	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-1.7934
chr7	24779190	24779213	SINE	ID_B1	B4	chr7ID_B124779183	NonProperStrand	54	chr3	144748059	144749264	protein_coding	Clca5	exon	ENSMUSG00000036960	ProperStrand	86	1	-12.8037
chr10	80643142	80643395	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr1	155287322	155287354	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	6	-12.6384
chr1	73971351	73971370	protein_coding	Tns1	exon	ENSMUSG00000055322	NonProperStrand	27	chr13	49779667	49779690	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-8.6156
chr16	85795631	85795647	protein_coding	Adamts1	utr3	ENSMUSG00000022893	ProperStrand	102	chr6	71832629	71832667	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-4.5838
chr10	39359398	39359427	protein_coding	Traf3ip2	intron	ENSMUSG00000019842	ProperStrand	5	chr16	23110829	23110875	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr14	121674889	121675466	protein_coding	Farp1	exon	ENSMUSG00000025555	ProperStrand	18	1	-6.8363
chr2	35899935	35899981	protein_coding	Ndufa8	exon	ENSMUSG00000026895	ProperStrand	5	chr13	57600832	57600851	protein_coding	Spock1	intron	ENSMUSG00000056222	ProperStrand	14	1	-inf
chr14	35225594	35225611	protein_coding	Bmpr1a	utr3	ENSMUSG00000021796	ProperStrand	21	chr17	27717513	27717572	protein_coding	Nudt3	utr3	ENSMUSG00000024213	ProperStrand	26	1	-16.9788
chr11	80079662	80079719	protein_coding	Rhot1	utr3	ENSMUSG00000017686	ProperStrand	40	chr9	15119646	15119736	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.3539
chr18	35716684	35716878	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	chr10	30530945	30531020	tRNA	tRNA81-GluCTC	.	141024	ProperStrand	154	2	-1.6779
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr7	52382012	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	2	-2.1553
chr4	149611390	149611447	protein_coding	Eno1	utr5	ENSMUSG00000063524	ProperStrand	432	chr17	71990955	71991000	snoRNA	ENSMUSG00000092713_CT010429.1	.	ENSMUSG00000092713	ProperStrand	182	4	-20.9908
chr18	43753434	43753514	protein_coding	Jakmip2	intron	ENSMUSG00000024502	NonProperStrand	3	chr18	43782517	43782607	protein_coding	Jakmip2	intron	ENSMUSG00000024502	ProperStrand	7	1	-inf
chr4	133536126	133538789	protein_coding	Dhdds	exon	ENSMUSG00000012117	ProperStrand	11	chr17	24857795	24857851	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-5.4831
chr9	72466974	72467017	protein_coding	Rfx7	exon	ENSMUSG00000037674	ProperStrand	20	chr5	130300460	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	6	-inf
chr10	79150918	79150934	protein_coding	Cdc34	utr3	ENSMUSG00000020307	NonProperStrand	1	chr5	134886958	134891066	protein_coding	Gtf2ird1	exon	ENSMUSG00000023079	ProperStrand	85	1	-inf
chr9	109779703	109780807	protein_coding	Cdc25a	exon	ENSMUSG00000032477	ProperStrand	27	chr19	46022236	46022252	protein_coding	9130011E15Rik	intron	ENSMUSG00000039901	ProperStrand	129	1	-13.3947
chr9	95757969	95757985	pseudogene	1700065D16Rik	.	ENSMUSG00000051368	ProperStrand	2	chr16	23110860	23110960	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr5	122018999	122019047	protein_coding	Aldh2	exon	ENSMUSG00000029455	ProperStrand	108	chr19	8963113	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.3633
chr1	152274083	152274106	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	chrX	20003435	20003535	protein_coding	Phf16	intron	ENSMUSG00000037315	ProperStrand	22	1	-10.9374
chr11	119207693	119207808	protein_coding	Sgsh	exon	ENSMUSG00000005043	ProperStrand	67	chr15	77625541	77625579	protein_coding	Myh9	intron	ENSMUSG00000022443	ProperStrand	570	1	-8.5868
chr3	34548946	34548992	protein_coding	Sox2	utr5	ENSMUSG00000074637	ProperStrand	299	chr7	118219574	118219637	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	3	-4.1834
chr13	9833567	9833656	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr11	72730046	72730062	protein_coding	Zzef1	exon	ENSMUSG00000055670	NonProperStrand	16	2	-12.2229
chr7	31666203	31666228	Simple_repeat	(TG)n	Simple_repeat	chr7(TG)n31665971	ProperStrand	1	chr13	69772739	69772780	protein_coding	Nsun2	utr3	ENSMUSG00000021595	ProperStrand	110	1	-inf
chr12	17552962	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr9	64023723	64023746	snoRNA	ENSMUSG00000064918_SNORD18	.	ENSMUSG00000064918	ProperStrand	370	1	-1.8230
chr2	26493429	26493509	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr10	74708150	74708240	protein_coding	Specc1l	exon	ENSMUSG00000033444	ProperStrand	36	1	-7.2101
chr11	69669499	69669900	protein_coding	Tnk1	utr5	ENSMUSG00000001583	ProperStrand	3	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	2	-inf
chr4	147315707	147315724	protein_coding	2510039O18Rik	exon	ENSMUSG00000044496	ProperStrand	28	chr17	13986613	13986661	protein_coding	Mllt4	exon	ENSMUSG00000068036	ProperStrand	156	1	-12.9373
chr11	106143289	106144113	protein_coding	Tcam1	exon	ENSMUSG00000020712	ProperStrand	1	chr19	8963104	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-inf
chr2	130104012	130104634	protein_coding	Nop56	exon	ENSMUSG00000027405	ProperStrand	125	chr11	55296245	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-4.7507
chr7	134850725	134850825	protein_coding	Bcl7c	exon	ENSMUSG00000030814	ProperStrand	15	chr18	35102297	35102324	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	6	-20.0175
chr3	76069096	76069114	protein_coding	Fstl5	intron	ENSMUSG00000034098	ProperStrand	23	chr8	73419743	73419774	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.9417
chr1	190796160	190796229	protein_coding	Kctd3	exon	ENSMUSG00000026608	ProperStrand	28	chr2	26493366	26493466	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	8	-20.1056
chr12	13238288	13240884	protein_coding	Ddx1	exon	ENSMUSG00000037149	ProperStrand	47	chr14	20692176	20692210	protein_coding	Gng2	utr3	ENSMUSG00000043004	ProperStrand	15	4	-inf
chr9	63549575	63549593	protein_coding	Smad3	intron	ENSMUSG00000032402	ProperStrand	12	chr16	23110453	23110517	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.4970
chr5	130295418	130295484	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	chr3	153574575	153574607	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	4	-7.4455
chr7	109147902	109148002	protein_coding	Numa1	utr5	ENSMUSG00000066306	ProperStrand	148	chr10	110918577	110918634	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-1.8940
chr15	78608485	78608698	protein_coding	Card10	exon	ENSMUSG00000033170	ProperStrand	4	chr16	23111742	23111822	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-7.1763
chr6	34262696	34262717	protein_coding	Akr1b3	exon	ENSMUSG00000001642	ProperStrand	71	chr16	58456214	58456231	protein_coding	Dcbld2	exon	ENSMUSG00000035107	NonProperStrand	8	1	-16.9821
chr19	16053332	16053377	protein_coding	Cep78	exon	ENSMUSG00000041491	ProperStrand	8	chr2	26494750	26494840	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	4	-18.9193
chr8	109212818	109212908	protein_coding	Tmco7	exon	ENSMUSG00000041949	ProperStrand	30	chr1	89673646	89673726	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	2	-7.6138
chr2	113513093	113513141	protein_coding	Fmn1	intron	ENSMUSG00000044042	ProperStrand	17	chr2	130103752	130103825	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	3	-19.5741
chr8	122018110	122018126	protein_coding	Slc38a8	exon	ENSMUSG00000034224	NonProperStrand	2	chr11	119266833	119266850	protein_coding	Rnf213	intron	ENSMUSG00000070327	NonProperStrand	13	1	-inf
chr8	119098500	119098600	protein_coding	Cdyl2	utr3	ENSMUSG00000031758	ProperStrand	35	chr1	88247778	88247825	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-6.1551
chr2	26206003	26206069	protein_coding	Dnlz	exon	ENSMUSG00000075467	ProperStrand	6	chr5	121655016	121655106	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-8.3778
chr2	179928404	179928495	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr3	79223176	79223193	protein_coding	Gm17359	intron	ENSMUSG00000091685	NonProperStrand	50	10	-20.2922
chr6	124347993	124348036	protein_coding	Pex5	exon	ENSMUSG00000005069	ProperStrand	27	chr16	23110897	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-9.3791
chr16	46390188	46390206	protein_coding	Pvrl3	utr3	ENSMUSG00000022656	NonProperStrand	1	chr3	123210854	123210957	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-inf
chr5	74489204	74489284	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr9	65044377	65044467	snRNA	ENSMUSG00000075763_U5	.	ENSMUSG00000075763	ProperStrand	216	1	-3.1982
chr2	30479348	30479364	LINE	L1M5	L1	chr2L1M530479194	ProperStrand	10	chr17	23955820	23955838	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	1	-15.1439
chr12	76464430	76464446	protein_coding	Rhoj	intron	ENSMUSG00000046768	NonProperStrand	9	chr17	24857747	24857837	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-5.8950
chr5	31361812	31361902	protein_coding	Cad	exon	ENSMUSG00000013629	ProperStrand	260	chr1	183835470	183835501	protein_coding	Enah	utr3	ENSMUSG00000022995	ProperStrand	196	1	-8.0065
chr11	5005634	5005816	protein_coding	Rhbdd3	exon	ENSMUSG00000034175	ProperStrand	7	chr16	23111731	23111788	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.9463
chr4	16919799	16919817	LTR	RLTR45-int	ERVK	chr4RLTR45-int16919712	ProperStrand	1	chr10	67558437	67558470	protein_coding	Arid5b	utr3	ENSMUSG00000019947	ProperStrand	43	1	-inf
chr7	24779190	24779213	SINE	ID_B1	B4	chr7ID_B124779183	NonProperStrand	54	chr5	14252800	14252816	protein_coding	Sema3e	utr3	ENSMUSG00000063531	ProperStrand	125	1	-12.0519
chr2	90235315	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	91815831	91815848	protein_coding	Dgkz	exon	ENSMUSG00000040479	ProperStrand	46	1	-4.9744
chr2	31907656	31907730	protein_coding	Nup214	utr3	ENSMUSG00000001855	ProperStrand	62	chr6	115757992	115758043	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	7	-19.9208
chr19	5798285	5800049	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr11	55296194	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	2	-2.1350
chr15	102493392	102493476	protein_coding	Atp5g2	utr3	ENSMUSG00000062683	ProperStrand	32	chr5	108336375	108336465	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-6.1131
chr7	73208695	73214096	protein_coding	Snrpa1	exon	ENSMUSG00000030512	ProperStrand	71	chr15	34370563	34370653	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-3.2413
chr9	21086538	21086629	protein_coding	Kri1	exon	ENSMUSG00000035047	ProperStrand	10	chr18	24264366	24264451	protein_coding	Ino80c	utr3	ENSMUSG00000047989	ProperStrand	5	1	-19.5370
chr3	99003135	99003155	protein_coding	Wars2	intron	ENSMUSG00000004233	NonProperStrand	48	chr11	69481335	69481431	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.6095
chr19	9045133	9045186	protein_coding-noncoding	Eef1g	utr5	ENSMUSG00000071644	ProperStrand	7	chr7	150717298	150717348	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	5	-inf
chr18	35714183	35714283	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	chr9	64143736	64143877	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	5	-1.2379
chr2	26768515	26768728	protein_coding	Rpl7a	exon	ENSMUSG00000062647	ProperStrand	234	chr11	62418036	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-2.9958
chr17	24377761	24379095	protein_coding	Ccnf	exon	ENSMUSG00000072082	ProperStrand	149	chr13	29043776	29043792	protein_coding	Sox4	exon	ENSMUSG00000076431	ProperStrand	73	1	-11.0934
chr5	119199753	119199795	protein_coding	Med13l	exon	ENSMUSG00000018076	ProperStrand	226	chr9	120038564	120038607	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-0.9721
chr11	72573418	72573471	protein_coding	Ankfy1	exon	ENSMUSG00000020790	ProperStrand	68	chr16	23111453	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.0916
chr5	34712988	34713004	Simple_repeat	(CGCGG)n	Simple_repeat	chr5(CGCGG)n34712901	NonProperStrand	1	chr11	69483137	69483237	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-inf
chr2	32072836	32089392	protein_coding	Prrc2b	utr3	ENSMUSG00000039262	ProperStrand	344	chr7	116664819	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	15	-17.7812
chr5	125510365	125510455	protein_coding	Ncor2	exon	ENSMUSG00000029478	ProperStrand	377	chr18	73693111	73693137	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-2.1517
chr13	54653936	54654032	protein_coding	4833439L19Rik	utr3	ENSMUSG00000025871	ProperStrand	14	chr18	35714252	35714290	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-6.2700
chr2	130101241	130101274	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	chr3	90279778	90279816	tRNA	tRNA792-MetCAT	.	885025	ProperStrand	42	1	-7.3011
chr8	122129036	122129052	protein_coding	Taf1c	utr5	ENSMUSG00000031832	ProperStrand	26	chr7	95266597	95266613	protein_coding	Grm5	intron	ENSMUSG00000049583	NonProperStrand	145	1	-13.2355
chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	chr12	100033278	100033305	protein_coding	Eml5	intron	ENSMUSG00000051166	ProperStrand	26	1	-11.1786
chr10	79750423	79750617	protein_coding	Dazap1	utr3	ENSMUSG00000069565	ProperStrand	57	chr16	23111748	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	11	-19.7683
chr7	52378395	52378481	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	chr19	8963024	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	12	-4.7560
chr15	80083503	80083525	protein_coding	Smcr7l	utr3	ENSMUSG00000022412	ProperStrand	19	chr5	92485139	92485218	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	1	-11.0681
chr2	144087323	144087463	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	chr10	23505148	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	43	-3.7394
chr3	45780645	45780665	LINE	Lx2B	L1	chr3Lx2B45780445	ProperStrand	34	chr9	120039533	120039622	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-4.3830
chr14	55513147	55513237	protein_coding	Pabpn1	exon	ENSMUSG00000022194	ProperStrand	22	chr9	120038468	120038548	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.9307
chr17	39985255	39985296	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr10	80641694	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	2	-1.8704
chr2	29814311	29814328	protein_coding	Gle1	utr3	ENSMUSG00000019715	ProperStrand	16	chr7	116663686	116663711	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.9773
chr1	183751689	183755773	protein_coding	Lbr	exon	ENSMUSG00000004880	ProperStrand	97	chrX	34622956	34623036	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-2.3326
chr15	78114514	78114531	protein_coding	Csf2rb2	utr3	ENSMUSG00000071714	NonProperStrand	14	chr4	131865855	131865972	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.3681
chr17	39979940	39980012	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr2	130103434	130103502	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-2.2807
chr11	102294587	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr5	74489545	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	3	-1.8101
chr10	5992641	5992726	protein_coding	Akap12	exon	ENSMUSG00000038587	ProperStrand	1008	chr13	49779669	49779759	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-1.7965
chr17	33914326	33914343	protein_coding	Angptl4	exon	ENSMUSG00000002289	NonProperStrand	1	chr11	69483212	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-inf
chrX	33560078	33560095	protein_coding	Dock11	exon	ENSMUSG00000031093	ProperStrand	42	chr16	23111375	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	8	-16.9220
chr4	133091485	133091632	protein_coding	Nudc	exon	ENSMUSG00000028851	ProperStrand	80	chr2	49113526	49113573	protein_coding	Mbd5	exon	ENSMUSG00000036792	ProperStrand	15	3	-inf
chr5	132213625	132213642	protein_coding	Auts2	intron	ENSMUSG00000029673	ProperStrand	71	chr17	24665465	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-4.6166
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	86475921	86476065	protein_coding	Pcbp1	utr5	ENSMUSG00000051695	ProperStrand	108	4	-11.2975
chr8	73032390	73032426	protein_coding	2810422J05Rik	exon	ENSMUSG00000055553	ProperStrand	171	chr11	69483142	69483264	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	4	-4.2971
chr15	81702974	81719813	protein_coding	Aco2	exon	ENSMUSG00000022477	ProperStrand	237	chr7	116664812	116664892	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-1.2895
chr17	32083140	32083230	protein_coding	Hsf2bp	utr3	ENSMUSG00000002076	ProperStrand	17	chr10	107800721	107800801	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	1	-10.6247
chr6	124666684	124666751	protein_coding	Phb2	utr3	ENSMUSG00000004264	ProperStrand	43	chr2	22444752	22444852	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-8.4439
chr19	8799852	8799914	lincRNA	Snhg1	exon	ENSMUSG00000090867	ProperStrand	100	chr12	106269341	106269441	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-3.1952
chr1	90498090	90498170	LTR	ORR1A2	MaLR	chr1ORR1A290498022	NonProperStrand	1	chr1	90497954	90498044	LTR	ORR1B1	MaLR	chr1ORR1B190497690	NonProperStrand	1	1	-inf
chr4	55431651	55431669	lincRNA	Gm12505	exon	ENSMUSG00000087070	ProperStrand	447	chr2	130101987	130102087	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-1.7449
chr3	140800345	140800425	Simple_repeat	(GA)n	Simple_repeat	chr3(GA)n140800292	NonProperStrand	1	chrX	97700114	97700204	protein_coding	Igbp1	intron	ENSMUSG00000031221	ProperStrand	33	1	-inf
chr10	84945609	84945703	protein_coding	Btbd11	intron	ENSMUSG00000020042	ProperStrand	13	chr8	32260336	32260374	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-7.6754
chr9	21823257	21823273	protein_coding	Elavl3	exon	ENSMUSG00000003410	NonProperStrand	137	chr11	106362586	106362634	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-5.7740
chr10	17547610	17547626	protein_coding	Txlnb	exon	ENSMUSG00000039891	ProperStrand	70	chr4	131865854	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.5345
chr11	53519866	53519887	protein_coding	Rad50	intron	ENSMUSG00000020380	ProperStrand	61	chr9	120037958	120038048	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	5	-18.1638
chrX	16264101	16264133	protein_coding	Maoa	utr3	ENSMUSG00000025037	NonProperStrand	2	chr11	69483135	69483235	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-9.6187
chr12	111862853	111891633	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr4	131865855	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	9	-1.2480
chr13	51743565	51743659	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	chr1	88252837	88252894	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	4	-4.4538
chr13	54686562	54686653	protein_coding	Nop16	utr3	ENSMUSG00000025869	ProperStrand	11	chr18	35716758	35716838	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-5.3336
chr2	26284469	26284617	protein_coding	Sec16a	exon	ENSMUSG00000026924	ProperStrand	86	chr16	23110526	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.8703
chr7	5019234	5019698	protein_coding	U2af2	exon	ENSMUSG00000030435	ProperStrand	103	chr17	24857760	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.4498
chr4	133403989	133404005	protein_coding	Rps6ka1	exon	ENSMUSG00000003644	ProperStrand	68	chr1	102076757	102076790	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	1	-9.1842
chr11	68805259	68805387	protein_coding	Pfas	exon	ENSMUSG00000020899	ProperStrand	53	chr19	8799027	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-6.0768
chr13	46796992	46797032	protein_coding	Nup153	exon	ENSMUSG00000021374	ProperStrand	69	chr16	23110909	23110999	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-1.8731
chr1	191700217	191700307	protein_coding	Ptpn14	utr3	ENSMUSG00000026604	ProperStrand	74	chr4	131908805	131908885	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.9524
chr16	46154654	46154755	protein_coding	Gm4737	exon	ENSMUSG00000048087	ProperStrand	10	chr16	18240811	18240881	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	8	-inf
chr13	59803463	59803479	protein_coding	Fam75d3	exon	ENSMUSG00000050876	ProperStrand	46	chr9	15119634	15119692	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.0997
chr15	98356818	98356908	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	chr5	92485138	92485218	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	3	-8.3298
chr19	10675173	10675216	protein_coding	Dak	exon	ENSMUSG00000034371	ProperStrand	12	chr4	131908236	131908297	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-10.5208
chr5	38616034	38617160	protein_coding	Lyar	exon	ENSMUSG00000067367	ProperStrand	33	chr11	69483136	69483229	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.5168
chr5	66088162	66088990	protein_coding	Pds5a	utr5	ENSMUSG00000029202	ProperStrand	62	chr12	52873634	52873663	protein_coding	Hectd1	exon	ENSMUSG00000035247	ProperStrand	41	1	-14.0214
chr6	51416218	51416337	protein_coding	Hnrnpa2b1	exon	ENSMUSG00000004980	ProperStrand	166	chr8	108167516	108187671	protein_coding	Ctcf	utr5	ENSMUSG00000005698	ProperStrand	75	1	-10.8227
chr5	42179240	42179277	protein_coding	Bod1l	utr3	ENSMUSG00000061755	ProperStrand	43	chr12	110874223	110874290	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	3	-inf
chr1	65118230	65118247	protein_coding	Crygc	exon	ENSMUSG00000025952	ProperStrand	12	chr4	116827119	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-10.3066
chr2	29852328	29882704	protein_coding	Spna2	exon	ENSMUSG00000057738	ProperStrand	222	chr9	15119701	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	5	-5.0606
chr8	107783510	107783527	protein_coding	Tradd	exon	ENSMUSG00000031887	ProperStrand	23	chr4	153410349	153410365	protein_coding	Ccdc27	exon	ENSMUSG00000039492	ProperStrand	94	1	-14.3486
chr14	70540739	70540755	protein_coding	2610301G19Rik	exon	ENSMUSG00000033712	ProperStrand	49	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-8.1448
chr11	120433020	120434025	protein_coding	P4hb	exon	ENSMUSG00000025130	ProperStrand	83	chr7	110114018	110114034	protein_coding	Olfr576	exon	ENSMUSG00000073962	NonProperStrand	79	1	-12.1080
chr19	40387937	40387953	protein_coding	Sorbs1	intron	ENSMUSG00000025006	NonProperStrand	16	chr5	115699433	115699980	protein_coding	Rnf10	exon	ENSMUSG00000041740	ProperStrand	95	1	-15.0793
chr7	74880353	74880380	protein_coding	Synm	exon	ENSMUSG00000030554	ProperStrand	15	chr11	69481354	69481433	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.8683
chr11	55311438	55311460	protein_coding	G3bp1	exon	ENSMUSG00000018583	ProperStrand	106	chr13	54782662	54782735	protein_coding	Rnf44	utr3	ENSMUSG00000034928	ProperStrand	90	1	-11.3551
chr15	98675141	98692738	protein_coding	Mll2	exon	ENSMUSG00000048154	ProperStrand	170	chr16	23111389	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	6	-3.4614
chr4	117317844	117317929	protein_coding	Eri3	intron	ENSMUSG00000033423	ProperStrand	246	chr7	26149440	26149456	protein_coding	Megf8	exon	ENSMUSG00000045039	NonProperStrand	45	1	-11.0639
chr3	127382745	127382761	protein_coding	Alpk1	exon	ENSMUSG00000028028	ProperStrand	19	chr16	23110527	23110557	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.5826
chr9	57443352	57443369	protein_coding	Ulk3	utr3	ENSMUSG00000032308	NonProperStrand	3	chr1	191058375	191058394	protein_coding	Kcnk2	intron	ENSMUSG00000037624	ProperStrand	56	1	-22.6255
chr2	90235294	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr12	110923180	110923241	snoRNA	ENSMUSG00000084487_SNORD113	.	ENSMUSG00000084487	ProperStrand	183	1	-2.4356
chr10	95015224	95026341	protein_coding	Nudt4	intron	ENSMUSG00000020029	ProperStrand	32	chr18	35716740	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-5.6246
chr10	69655338	69655438	protein_coding	Ccdc6	utr3	ENSMUSG00000048701	ProperStrand	72	chr16	23111698	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-4.6751
chr13	55741238	55746774	protein_coding	Ddx46	exon	ENSMUSG00000021500	ProperStrand	87	chr10	23505150	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-0.7713
chr1	194571790	194571880	snRNA	ENSMUSG00000064881_U5	.	ENSMUSG00000064881	ProperStrand	187	chr4	131865889	131865969	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-1.5913
chr11	75213972	75214062	protein_coding-noncoding	Smyd4	utr5	ENSMUSG00000018809	ProperStrand	1	chr11	75213777	75213867	protein_coding	Smyd4	exon	ENSMUSG00000018809	ProperStrand	11	1	-inf
chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	chr11	97643061	97643100	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	1	-2.9113
chr2	162902202	162902291	protein_coding	Mybl2	intron	ENSMUSG00000017861	ProperStrand	230	chr17	39985717	39985751	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-3.3722
chr11	101320661	101320760	protein_coding	Vat1	utr3	ENSMUSG00000034993	ProperStrand	69	chr16	23111448	23111501	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.0727
chr8	12757419	12757437	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr6	83318070	83318086	protein_coding	Tet3	exon	ENSMUSG00000034832	NonProperStrand	93	1	-7.7177
chr19	47182242	47182338	protein_coding	Pdcd11	intron	ENSMUSG00000025047	ProperStrand	137	chr5	30441216	30441233	protein_coding	Fam59b	exon	ENSMUSG00000044576	NonProperStrand	20	3	-19.3383
chr5	53257215	53257634	protein_coding	Anapc4	exon	ENSMUSG00000029176	ProperStrand	11	chr2	152163523	152163539	protein_coding	Trib3	utr3	ENSMUSG00000032715	NonProperStrand	46	1	-17.4068
chr16	37050224	37050242	protein_coding	Polq	intron	ENSMUSG00000034206	NonProperStrand	8	chr5	108332833	108333740	protein_coding	Rpl5	exon	ENSMUSG00000058558	ProperStrand	235	1	-14.7053
chr19	46901557	46901600	protein_coding	Cnnm2	intron	ENSMUSG00000064105	ProperStrand	18	chr17	35299543	35299633	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-7.1621
chr5	31783924	31783943	protein_coding	Zfp512	utr3	ENSMUSG00000062761	ProperStrand	44	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-6.4805
chr3	95109895	95109913	protein_coding	Anxa9	intron	ENSMUSG00000015702	NonProperStrand	5	chr2	80370413	80373817	protein_coding	Nckap1	exon	ENSMUSG00000027002	ProperStrand	21	1	-18.9639
chr13	100204441	100204459	protein_coding	Mtap1b	utr3	ENSMUSG00000052727	NonProperStrand	20	chr15	79908956	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	2	-12.3164
chr2	90235312	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	96999676	96999692	lincRNA	Nlrc5	exon	ENSMUSG00000074151	NonProperStrand	25	1	-6.1754
chr2	89368461	89368481	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	chr16	23111381	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	8	-3.1348
chr15	36525496	36525586	protein_coding	Pabpc1	utr3	ENSMUSG00000022283	ProperStrand	908	chr9	30972154	30972234	protein_coding	Aplp2	exon	ENSMUSG00000031996	ProperStrand	172	10	-20.6575
chr12	8505203	8505293	protein_coding	Rhob	utr3	ENSMUSG00000054364	ProperStrand	10	chr11	69483200	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-5.8555
chr1	182926164	182926264	protein_coding	Ephx1	exon	ENSMUSG00000038776	ProperStrand	26	chr11	97641452	97641487	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	1	-9.5409
chr6	100226985	100227085	protein_coding	Rybp	intron	ENSMUSG00000072872	ProperStrand	51	chr1	63225262	63225284	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	7	-inf
chr2	90235314	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	48685416	48685436	protein_coding	Murc	exon	ENSMUSG00000028348	NonProperStrand	1	1	-inf
chr11	120148960	120148976	protein_coding	Bahcc1	exon	ENSMUSG00000039741	NonProperStrand	268	chr4	32822282	32822348	protein_coding	Mdn1	exon	ENSMUSG00000058006	ProperStrand	184	1	-8.0719
chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	chr17	23955820	23955836	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	1	-7.5677
chr8	88396992	88397025	protein_coding	Phkb	intron	ENSMUSG00000036879	ProperStrand	25	chr16	23111374	23111464	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-7.0200
chr6	134780323	134780339	protein_coding	Crebl2	utr5	ENSMUSG00000032652	ProperStrand	41	chr7	114886508	114886563	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	ProperStrand	11	1	-17.5653
chr8	88402108	88402142	protein_coding	Phkb	exon	ENSMUSG00000036879	ProperStrand	25	chr16	23110970	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.2939
chr7	25320514	25320614	protein_coding	Irgq	utr3	ENSMUSG00000041037	ProperStrand	19	chr10	110918657	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	15	-22.4287
chr14	26278878	26478188	protein_coding	Zmiz1	utr5	ENSMUSG00000007817	ProperStrand	34	chr17	35088970	35089025	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	2	-11.2783
chr19	23332023	23332040	protein_coding	Smc5	exon	ENSMUSG00000024943	ProperStrand	146	chr16	23111373	23111496	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-1.3662
chrX	71517823	71517952	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	chr2	144087324	144087462	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	8	-9.8448
chr6	114787063	114787091	protein_coding	Atg7	intron	ENSMUSG00000030314	ProperStrand	26	chrX	34622906	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	6	-21.6752
chr5	129109143	129109160	protein_coding	Fzd10	utr3	ENSMUSG00000081683	NonProperStrand	1	chr9	120039626	120039675	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-inf
chr3	143868679	143868697	Low_complexity	GC_rich	Low_complexity	chr3GC_rich143868627	ProperStrand	1	chr19	6070738	6070756	protein_coding	1110014N23Rik	exon	ENSMUSG00000024797	ProperStrand	49	1	-inf
chr6	121598192	121599786	protein_coding	A2m	exon	ENSMUSG00000030111	ProperStrand	17	chr16	23110931	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-3.4874
chr1	71637445	71639723	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr7	25320580	25320597	protein_coding	Irgq	utr3	ENSMUSG00000041037	NonProperStrand	1	1	-inf
chr10	127994842	127994888	protein_coding	Pa2g4	utr3	ENSMUSG00000025364	ProperStrand	72	chr11	97643003	97643093	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.1659
chr15	80758168	80759550	protein_coding	Tnrc6b	exon	ENSMUSG00000047888	ProperStrand	59	chr1	162965551	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.3068
chr17	36097663	36097764	protein_coding	Abcf1	exon	ENSMUSG00000038762	ProperStrand	206	chr4	119941547	119941564	protein_coding	Foxo6	exon	ENSMUSG00000052135	ProperStrand	31	1	-12.1736
chr19	5088598	5088614	protein_coding	Yif1a	utr5	ENSMUSG00000024875	ProperStrand	1	chr2	53003875	53003891	protein_coding	Prpf40a	exon	ENSMUSG00000061136	ProperStrand	129	1	-inf
chr1	72896204	72898831	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	chr9	15119664	15119968	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	5	-2.5114
chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	chr5	113919913	113919930	protein_coding	Wscd2	utr5	ENSMUSG00000085571	NonProperStrand	40	1	-12.5052
chr13	22373248	22373338	LTR	RMER20B	ERVK	chr13RMER20B22373258	NonProperStrand	1	chr2	31716537	31716617	LTR	MTD	MaLR	chr2MTD31716307	ProperStrand	1	1	-inf
chr13	74494657	74494674	protein_coding	Ccdc127	utr3	ENSMUSG00000021578	NonProperStrand	54	chr9	83678800	83681879	protein_coding	Elovl4	exon	ENSMUSG00000032262	ProperStrand	159	1	-11.5700
chr8	44225166	44225199	protein_coding	Triml1	intron	ENSMUSG00000031651	ProperStrand	12	chr5	108334196	108334286	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-8.0381
chr12	77811472	77811488	protein_coding	Spnb1	utr5	ENSMUSG00000021061	NonProperStrand	37	chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	1	-12.4103
chr8	122601387	122601477	protein_coding	Gm20388	intron	ENSMUSG00000092329	NonProperStrand	203	chr8	122864660	122864750	protein_coding	Gm20388	intron	ENSMUSG00000092329	ProperStrand	295	1	-7.6861
chr10	75760507	75760597	protein_coding	Dip2a	exon	ENSMUSG00000020231	ProperStrand	25	chr10	90581044	90581124	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	2	-10.5961
chr1	123379182	123379892	protein_coding	Ccdc93	exon	ENSMUSG00000026339	ProperStrand	14	chr5	121655015	121655095	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-6.5960
chr16	72742411	72742440	protein_coding	Robo1	exon	ENSMUSG00000022883	ProperStrand	47	chr4	131908689	131908744	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.5727
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr10	62802344	62802360	protein_coding	Sirt1	intron	ENSMUSG00000020063	NonProperStrand	116	1	-6.4866
chr4	131825994	131826084	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	NonProperStrand	4	chr4	131865885	131865975	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	NonProperStrand	39	1	-18.3828
chr6	4708530	4709719	protein_coding	Peg10	utr3	ENSMUSG00000092035	ProperStrand	102	chr17	35299504	35299559	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	2	-6.3676
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr16	14461216	14461290	protein_coding	Abcc1	utr5	ENSMUSG00000023088	ProperStrand	35	2	-9.7935
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr17	48646541	48646557	protein_coding	Unc5cl	intron	ENSMUSG00000043592	ProperStrand	3	1	-15.7513
chr1	158361098	158361132	protein_coding	Soat1	utr3	ENSMUSG00000026600	ProperStrand	21	chr7	116664850	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	6	-20.4750
chr2	25296056	25296156	protein_coding	Abca2	exon	ENSMUSG00000026944	ProperStrand	57	chr15	79913288	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-3.6873
chr18	24683706	24683741	protein_coding	Rprd1a	intron	ENSMUSG00000040446	ProperStrand	21	chr10	23505149	23505247	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.9252
chrX	39763512	39763592	LINE	L1_Rod	L1	chrXL1_Rod39763281	NonProperStrand	1	chr15	10428299	10428389	protein_coding	Rad1	utr3	ENSMUSG00000022248	NonProperStrand	2	1	-inf
chr11	4388501	4388544	protein_coding	Mtmr3	exon	ENSMUSG00000034354	ProperStrand	25	chr1	181027187	181027205	protein_coding	Smyd3	intron	ENSMUSG00000055067	ProperStrand	231	1	-12.3827
chr12	114290175	114290191	protein_coding	Pacs2	intron	ENSMUSG00000021143	NonProperStrand	302	chr17	35089181	35089229	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-2.4880
chr7	52382234	52382315	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	chr3	123210854	123210986	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	10	-1.9150
chr3	88530389	88533046	protein_coding	Rit1	exon	ENSMUSG00000028057	ProperStrand	2	chr2	26493366	26493481	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-11.0703
chr14	13326355	13326372	protein_coding	Cadps	intron	ENSMUSG00000054423	ProperStrand	32	chr10	39978374	39978484	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	3	-15.2831
chr3	88897742	88898157	protein_coding	Fdps	exon	ENSMUSG00000059743	ProperStrand	12	chr7	29136552	29136599	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.3856
chr11	106649731	106649756	protein_coding	Ddx5	utr5	ENSMUSG00000020719	ProperStrand	181	chr15	82980134	82980192	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-4.9740
chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	chr1	162966812	162966843	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-2.4803
chr17	23956489	23956570	protein_coding	Srrm2	utr3	ENSMUSG00000039218	ProperStrand	521	chr9	53665718	53665783	protein_coding	Slc35f2	utr3	ENSMUSG00000042195	ProperStrand	65	1	-8.8264
chr15	76428263	76428288	protein_coding	Cpsf1	exon	ENSMUSG00000034022	ProperStrand	127	chr11	62418046	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	2	-6.8902
chr6	30093965	30093987	misc_RNA	7SK	.	ENSMUSG00000065343	ProperStrand	2	chr5	121655016	121655099	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-inf
chr9	123168593	123168660	protein_coding	Tmem158	utr3	ENSMUSG00000054871	ProperStrand	8	chr4	131908356	131908423	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	6	-19.1610
chr18	35063776	35063869	protein_coding	Etf1	utr3	ENSMUSG00000024360	ProperStrand	74	chr18	35716834	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.8323
chr2	157145870	157145887	protein_coding	Rpn2	exon	ENSMUSG00000027642	NonProperStrand	3	chr16	23110903	23110919	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr7	133914505	133914553	protein_coding	Gdpd3	exon	ENSMUSG00000030703	ProperStrand	3	chr5	98882933	98882951	protein_coding	1700007G11Rik	intron	ENSMUSG00000057816	NonProperStrand	8	2	-20.5138
chr7	52981823	52981888	protein_coding	Fam83e	intron	ENSMUSG00000054161	ProperStrand	2	chr11	68887017	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-11.5005
chr4	55431652	55431668	lincRNA	Gm12505	exon	ENSMUSG00000087070	ProperStrand	447	chr5	138631503	138631621	protein_coding	Cnpy4	exon	ENSMUSG00000036968	ProperStrand	6	1	-14.0493
chr6	28476963	28834994	protein_coding	Snd1	exon	ENSMUSG00000001424	ProperStrand	210	chr10	110918547	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	11	-inf
chr19	41946278	41947462	protein_coding	Rrp12	exon	ENSMUSG00000035049	ProperStrand	106	chr1	162965536	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.2816
chr2	90235304	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr12	54793488	54793504	protein_coding	Npas3	intron	ENSMUSG00000021010	NonProperStrand	29	1	-5.8800
chr3	88387758	88390827	protein_coding	Ssr2	exon	ENSMUSG00000041355	ProperStrand	22	chr5	111121086	111121166	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-8.4462
chr9	30957807	30958416	protein_coding	Aplp2	utr3	ENSMUSG00000031996	ProperStrand	172	chr4	131908236	131908438	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-1.2579
chr19	41992422	41992444	protein_coding	Pgam1	utr3	ENSMUSG00000011752	ProperStrand	124	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-6.2882
chr13	3892163	3892205	protein_coding	Net1	intron	ENSMUSG00000021215	ProperStrand	32	chr9	59513126	59513166	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	3	-18.6307
chr17	32339383	32339464	protein_coding	Brd4	exon	ENSMUSG00000024002	ProperStrand	121	chr19	8963114	8963174	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.2065
chr18	65347333	65347363	protein_coding	Nedd4l	intron	ENSMUSG00000024589	ProperStrand	44	chr16	34053659	34054926	protein_coding	Kalrn	exon	ENSMUSG00000061751	ProperStrand	135	5	-inf
chr18	10743320	10743379	protein_coding	Mib1	exon	ENSMUSG00000024294	ProperStrand	27	chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	1	-10.4406
chr16	33057617	33058795	protein_coding	Rpl35a	exon	ENSMUSG00000060636	ProperStrand	33	chr16	23110852	23110942	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.9284
chr12	72411180	72411196	protein_coding	Dact1	exon	ENSMUSG00000044548	ProperStrand	11	chr4	131865932	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.8470
chr9	50578760	50578776	protein_coding	Fdxacb1	exon	ENSMUSG00000037845	ProperStrand	2	chr2	26494708	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-10.3719
chr5	77388394	77388470	protein_coding	Paics	exon	ENSMUSG00000029247	ProperStrand	78	chr18	35714218	35714254	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-2.9686
chr4	99577397	99577413	protein_coding	Itgb3bp	intron	ENSMUSG00000028549	ProperStrand	55	chr12	24253372	24253449	pseudogene	Gm20474	.	ENSMUSG00000091973	ProperStrand	2	1	-inf
chr9	56222194	56265749	protein_coding	C230081A13Rik	utr5	ENSMUSG00000074305	ProperStrand	40	chr10	23505559	23505585	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-8.3622
chr2	32470320	32470404	protein_coding	St6galnac6	exon	ENSMUSG00000026811	ProperStrand	17	chr1	88252836	88252876	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	2	-14.6117
chr14	20587637	20587689	protein_coding	Nid2	exon	ENSMUSG00000021806	ProperStrand	372	chr10	23506278	23506323	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-3.4375
chr4	43505651	43505721	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr8	77622996	77623083	protein_coding	Hmox1	intron	ENSMUSG00000005413	ProperStrand	12	1	-6.1793
chr3	133150457	133150557	protein_coding	Tet2	exon	ENSMUSG00000040943	ProperStrand	192	chr2	130103774	130103825	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-6.1640
chr7	28146782	28146798	protein_coding	Spnb4	exon	ENSMUSG00000011751	NonProperStrand	84	chr16	23111373	23111449	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-4.1106
chr18	53568958	53570651	protein_coding	Ppic	exon	ENSMUSG00000024538	ProperStrand	13	chr7	116664794	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-12.9541
chr4	154357639	154357655	protein_coding	Plch2	utr3	ENSMUSG00000029055	NonProperStrand	7	chr9	120038611	120038663	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-7.2707
chr14	20598939	20600401	protein_coding	Nid2	exon	ENSMUSG00000021806	ProperStrand	372	chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	1	-5.8685
chr17	23955820	23955838	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	chr7	107463024	107463041	protein_coding	P4ha3	intron	ENSMUSG00000051048	NonProperStrand	29	1	-12.9478
chr17	64273884	64273923	protein_coding	Fer	intron	ENSMUSG00000000127	ProperStrand	10	chr2	24825186	24827046	protein_coding	Wdr85	exon	ENSMUSG00000026975	ProperStrand	323	1	-13.6102
chr12	33661520	33661536	protein_coding	Sypl	utr3	ENSMUSG00000020570	ProperStrand	18	chr11	115279248	115279749	protein_coding	Atp5h	exon	ENSMUSG00000034566	ProperStrand	11	1	-18.4766
chr6	56051505	56051521	protein_coding	Pde1c	utr3	ENSMUSG00000004347	ProperStrand	31	chr7	117189863	117189933	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-7.5250
chr16	10241742	10241795	protein_coding	Atf7ip2	exon	ENSMUSG00000039200	ProperStrand	9	chr7	38433950	38433968	protein_coding	Zfp536	intron	ENSMUSG00000043456	ProperStrand	57	1	-17.1841
chr19	37223549	37223566	protein_coding	Cpeb3	intron	ENSMUSG00000039652	NonProperStrand	23	chr4	131865855	131865955	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.4190
chr1	58070459	58070559	protein_coding	Sgol2	exon	ENSMUSG00000026039	ProperStrand	36	chr17	88045580	88045621	protein_coding	Epcam	exon	ENSMUSG00000045394	ProperStrand	43	2	-inf
chr1	16745933	16746013	LINE	L1VL4	L1	chr1L1VL416745852	ProperStrand	1	chr1	16745784	16745874	SINE	B1_Mus2	Alu	chr1B1_Mus216745705	ProperStrand	1	1	-inf
chr7	146209381	146210764	protein_coding	Jakmip3	exon	ENSMUSG00000056856	ProperStrand	8	chr4	131908687	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.7736
chr6	54379743	54379760	lincRNA	9130019P16Rik	exon	ENSMUSG00000073067	ProperStrand	255	chr11	6428088	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-0.9294
chr5	100855944	100855974	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr13	55105923	55105939	protein_coding	Unc5a	exon	ENSMUSG00000025876	NonProperStrand	96	1	-5.7124
chr19	35019059	35019147	protein_coding	Kif20b	intron	ENSMUSG00000024795	ProperStrand	45	chr11	62416635	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-5.7289
chr2	160807329	160807384	protein_coding	Chd6	exon	ENSMUSG00000057133	ProperStrand	104	chr11	62416626	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-4.1130
chr2	90235295	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	46663594	46814100	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	3	-3.2960
chr8	73051744	73051761	protein_coding	Fkbp8	utr5	ENSMUSG00000019428	ProperStrand	52	chr18	73693165	73693188	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-5.8047
chr1	55053741	55053765	protein_coding	Sf3b1	exon	ENSMUSG00000025982	ProperStrand	158	chr5	122691914	122691930	protein_coding	Hvcn1	utr3	ENSMUSG00000064267	ProperStrand	182	1	-9.1463
chr14	82656143	82656162	LINE	Lx8	L1	chr14Lx882655713	ProperStrand	1	chr4	131865867	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr1	74470278	74470339	protein_coding	Vil1	exon	ENSMUSG00000026175	ProperStrand	68	chr5	125935779	125935869	protein_coding	Bri3bp	utr3	ENSMUSG00000037905	ProperStrand	43	1	-13.7360
chr19	6315090	6315182	protein_coding	Cdc42bpg	exon	ENSMUSG00000024769	ProperStrand	90	chr4	131908396	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-1.7849
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr11	94327810	94327826	protein_coding	Cacna1g	intron	ENSMUSG00000020866	ProperStrand	35	1	-9.8009
chr1	90157351	90157389	protein_coding	Hjurp	intron	ENSMUSG00000044783	ProperStrand	110	chr9	63066908	63066926	protein_coding	Map2k5	intron	ENSMUSG00000058444	NonProperStrand	79	2	-18.1814
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr14	31867350	31867368	protein_coding	Pbrm1	exon	ENSMUSG00000042323	ProperStrand	87	1	-8.6250
chr11	94157332	94158225	protein_coding	Luc7l3	exon	ENSMUSG00000020863	ProperStrand	38	chr16	23110902	23110993	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-2.6677
chr2	91757807	91757848	protein_coding	Ambra1	exon	ENSMUSG00000040506	ProperStrand	65	chr19	8800377	8800467	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-3.3830
chr16	23111690	23111734	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	chr12	81492595	81492685	snoRNA	ENSMUSG00000088158_Scarna3b	.	ENSMUSG00000088158	ProperStrand	147	4	-3.6100
chr14	26705780	26705834	protein_coding	Anxa11	utr3	ENSMUSG00000021866	ProperStrand	30	chr1	158571946	158572046	protein_coding	Abl2	exon	ENSMUSG00000026596	ProperStrand	37	1	-15.7064
chr17	46352680	46354554	protein_coding	Xpo5	exon	ENSMUSG00000067150	ProperStrand	31	chr1	162967490	162967509	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	10	-21.0966
chr11	25752343	25752360	protein_coding	5730522E02Rik	intron	ENSMUSG00000032985	NonProperStrand	20	chr16	23110892	23110913	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.6223
chr7	25657137	25657186	protein_coding	Dmrtc2	intron	ENSMUSG00000011349	ProperStrand	6	chr10	23505189	23505279	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-19.6834
chr7	19591759	19591859	protein_coding	Irf2bp1	utr3	ENSMUSG00000044030	ProperStrand	16	chr19	8799831	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-7.5773
chr3	33707757	33707776	protein_coding	Ttc14	utr3	ENSMUSG00000027677	ProperStrand	25	chr9	120039588	120039678	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	3	-11.8528
chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr7	117166756	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	4	-0.9002
chr9	14631051	14633810	protein_coding	Mre11a	exon	ENSMUSG00000031928	ProperStrand	20	chrX	84483703	84483751	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-10.4704
chr15	78939631	78939647	protein_coding	Micall1	utr5	ENSMUSG00000033039	ProperStrand	48	chr7	38354919	38354935	protein_coding	Zfp536	exon	ENSMUSG00000043456	NonProperStrand	236	1	-11.0166
chr10	59413423	59413461	protein_coding	Ddit4	exon	ENSMUSG00000020108	ProperStrand	49	chr2	4974190	4974207	protein_coding	Optn	exon	ENSMUSG00000026672	ProperStrand	451	1	-9.6815
chr10	42755629	42755649	protein_coding	Sobp	intron	ENSMUSG00000038248	NonProperStrand	25	chr4	131908363	131908418	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.8464
chr2	75765724	75765740	protein_coding	Agps	utr3	ENSMUSG00000042410	NonProperStrand	9	chr1	162968442	162968497	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	3	-inf
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-7.5677
chr5	122620562	122620662	protein_coding	Ppp1cc	intron	ENSMUSG00000004455	ProperStrand	46	chr19	8799021	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	4	-19.0556
chrX	147428667	147428856	protein_coding	Gnl3l	exon	ENSMUSG00000025266	ProperStrand	52	chr4	131908236	131908292	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.6297
chr12	88614796	88614852	protein_coding	Ahsa1	utr3	ENSMUSG00000021037	ProperStrand	58	chr19	5758600	5758634	protein_coding	Scyl1	exon	ENSMUSG00000024941	ProperStrand	59	27	-inf
chr3	47479894	47479984	LTR	MTB	MaLR	chr3MTB47479882	NonProperStrand	1	chr3	47480170	47480260	LTR	RLTR9E	ERVK	chr3RLTR9E47480169	NonProperStrand	1	1	-inf
chr4	131908226	131908269	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr1	129271706	129271758	snoRNA	ENSMUSG00000065687_snoU6-53	.	ENSMUSG00000065687	ProperStrand	78	2	-10.8676
chr14	61985831	61985858	protein_coding	Kpna3	utr3	ENSMUSG00000021929	ProperStrand	14	chr4	131908689	131908727	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.6665
chr9	59518337	59518391	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr6	117795659	117795676	protein_coding	Zfp637	exon	ENSMUSG00000059689	NonProperStrand	53	2	-11.9116
chr14	119693352	119693368	protein_coding	Hs6st3	intron	ENSMUSG00000053465	NonProperStrand	134	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-5.2770
chr9	21005666	21005732	protein_coding	Pde4a	exon	ENSMUSG00000032177	ProperStrand	11	chr11	102662460	102662476	protein_coding	Gjc1	exon	ENSMUSG00000034520	NonProperStrand	39	1	-17.4650
chr11	62418013	62418034	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr11	3879007	3879055	protein_coding	Pes1	utr3	ENSMUSG00000020430	ProperStrand	49	2	-14.8539
chr7	28475137	28475180	protein_coding	C030039L03Rik	intron	ENSMUSG00000057093	ProperStrand	1	chr4	116827121	116827173	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-inf
chr13	30338191	30338207	protein_coding	Mboat1	utr3	ENSMUSG00000038732	NonProperStrand	148	chr1	145626057	145626192	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-7.0301
chr15	82725599	82725637	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-4.2302
chr7	16534823	16534839	protein_coding	Ehd2	utr3	ENSMUSG00000074364	NonProperStrand	197	chr19	8963030	8963115	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-2.2536
chr11	96908852	96910266	protein_coding	Mrpl10	exon	ENSMUSG00000001445	ProperStrand	43	chr10	23505152	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	15	-inf
chr10	5991461	5991561	protein_coding	Akap12	exon	ENSMUSG00000038587	ProperStrand	1008	chr17	35089181	35089210	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	2	-1.5409
chr3	90945136	90945226	LINE	L1_Mus2	L1	chr3L1_Mus290941963	ProperStrand	1	chr1	17054295	17054375	protein_coding	Jph1	intron	ENSMUSG00000042686	NonProperStrand	4	1	-inf
chr11	3426352	3426368	protein_coding	Smtn	exon	ENSMUSG00000020439	ProperStrand	222	chr17	35089182	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-3.0235
chr8	25585556	25585573	LINE	Lx	L1	chr8Lx25585401	ProperStrand	6	chr4	151704136	151704190	protein_coding	Rpl22	exon	ENSMUSG00000028936	ProperStrand	112	1	-16.8013
chr2	152833503	152833519	protein_coding-noncoding	Ttll9	utr5	ENSMUSG00000074673	ProperStrand	1	chr2	158205317	158205406	snoRNA	ENSMUSG00000064585_SNORA71	.	ENSMUSG00000064585	ProperStrand	418	1	-inf
chr19	10290955	10290972	protein_coding	Gm98	exon	ENSMUSG00000036098	NonProperStrand	4	chr1	16093720	16093739	protein_coding	Rpl7	exon	ENSMUSG00000043716	ProperStrand	93	1	-17.9098
chr1	164635614	164635652	protein_coding	Prrc2c	exon	ENSMUSG00000040225	ProperStrand	413	chr8	129468800	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	3	-3.5573
chr1	162967504	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	chr1	59761635	59761715	snoRNA	ENSMUSG00000089093_Snord11	.	ENSMUSG00000089093	ProperStrand	193	4	-6.1815
chr2	83504129	83504201	protein_coding	Zc3h15	utr3	ENSMUSG00000027091	ProperStrand	37	chr16	23110939	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-7.2887
chr11	99283266	99283282	protein_coding	Krt12	exon	ENSMUSG00000020912	ProperStrand	10	chr15	73412115	73412176	protein_coding	Slc45a4	utr3	ENSMUSG00000079020	ProperStrand	127	1	-15.4818
chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr11	69481333	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	6	-1.5173
chr17	74772666	74773069	protein_coding	Spast	exon	ENSMUSG00000024068	ProperStrand	13	chr14	33005039	33005064	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	3	-16.1071
chr2	143764374	143765694	protein_coding	Dstn	exon	ENSMUSG00000015932	ProperStrand	22	chr16	76352758	76373180	protein_coding	Nrip1	utr5	ENSMUSG00000048490	ProperStrand	50	1	-15.7017
chr5	142459852	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	chr2	22444695	22444822	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-5.1318
chr6	125112672	125112896	protein_coding	Gapdh	exon	ENSMUSG00000057666	ProperStrand	356	chr10	39978280	39978360	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-2.1910
chr19	3473865	3484832	protein_coding	Ppp6r3	exon	ENSMUSG00000024908	ProperStrand	63	chr4	131865865	131865954	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.6928
chr10	23505029	23505429	protein_coding	Rps12	intron	ENSMUSG00000061983	ProperStrand	309	chr3	123210854	123210938	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	4	-1.5415
chr11	55296214	55296334	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	chr3	123210854	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	23	-0.9897
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr10	39978405	39978484	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-1.3094
chr9	15124029	15124049	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	NonProperStrand	100	chr10	110918591	110918691	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-2.5402
chr3	85944541	85944610	snoRNA	ENSMUSG00000064390_Rnu73b	.	ENSMUSG00000064390	ProperStrand	164	chr18	33954870	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-1.7822
chr11	84042523	84045163	protein_coding	Acaca	exon	ENSMUSG00000020532	ProperStrand	100	chr9	50816470	50816491	protein_coding	Sik2	intron	ENSMUSG00000037112	ProperStrand	4	1	-17.8226
chr7	86500371	86500388	protein_coding	Abhd2	intron	ENSMUSG00000039202	NonProperStrand	12	chr7	117192487	117192506	protein_coding	Ipo7	exon	ENSMUSG00000066232	ProperStrand	2121	1	-9.4636
chr16	85802545	85802564	protein_coding	Adamts1	exon	ENSMUSG00000022893	ProperStrand	102	chrX	34622906	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-2.2488
chr1	95048511	95048528	protein_coding	2310007B03Rik	utr3	ENSMUSG00000034159	ProperStrand	1	chr5	33591071	33591165	protein_coding	Ctbp1	utr3	ENSMUSG00000037373	ProperStrand	17	1	-inf
chr11	69481333	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	chr4	56910492	56910629	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	21	-5.2539
chr10	59757356	59757392	protein_coding	Psap	exon	ENSMUSG00000004207	ProperStrand	124	chr4	134479844	134479860	protein_coding	D4Wsu53e	exon	ENSMUSG00000037266	NonProperStrand	50	1	-12.2235
chr2	127953344	127953361	protein_coding-noncoding	Bcl2l11	utr5	ENSMUSG00000027381	NonProperStrand	17	chr4	131865856	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	6	-inf
chr2	81250999	81251079	SINE	RSINE1	B4	chr2RSINE181250985	NonProperStrand	1	chr2	112741395	112741485	protein_coding	Ryr3	intron	ENSMUSG00000057378	ProperStrand	15	1	-inf
chr16	22382949	22383039	protein_coding	Etv5	utr3	ENSMUSG00000013089	ProperStrand	88	chr16	23111391	23111471	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.7796
chr19	55700530	55700548	protein_coding	Vti1a	utr3	ENSMUSG00000024983	NonProperStrand	62	chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	1	-11.3687
chr19	51412172	51412262	LINE	Lx7	L1	chr19Lx751411812	ProperStrand	1	chr19	51412516	51412596	LINE	Lx7	L1	chr19Lx751412502	ProperStrand	1	1	-inf
chr13	9833552	9833617	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr2	112143198	112143216	protein_coding	Slc12a6	intron	ENSMUSG00000027130	NonProperStrand	72	1	-4.6034
chr8	113365126	113365150	protein_coding	Sf3b3	exon	ENSMUSG00000033732	ProperStrand	181	chr5	74489564	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	9	-21.4699
chr4	79650677	79650711	pseudogene	Gm11410	.	ENSMUSG00000083219	ProperStrand	47	chr19	8799847	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-5.4220
chr4	129814756	129814772	protein_coding	Hcrtr1	exon	ENSMUSG00000028778	NonProperStrand	4	chr12	29320492	29320740	protein_coding	Rps7	utr5	ENSMUSG00000061477	ProperStrand	129	1	-17.5007
chr7	13614840	13615030	protein_coding	Trim28	exon	ENSMUSG00000005566	ProperStrand	296	chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-2.8395
chr11	75304181	75304211	protein_coding	Prpf8	exon	ENSMUSG00000020850	ProperStrand	255	chr2	181316563	181316579	protein_coding	Uckl1	exon	ENSMUSG00000089917	ProperStrand	142	1	-8.6870
chr4	128164996	128165012	protein_coding	Csmd2	intron	ENSMUSG00000028804	NonProperStrand	34	chr2	26494811	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.1609
chr8	113706441	113706531	protein_coding	Glg1	exon	ENSMUSG00000003316	ProperStrand	83	chr18	35716760	35716840	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	6	-10.9852
chr16	52206080	52206101	protein_coding	Cblb	utr3	ENSMUSG00000022637	ProperStrand	15	chr2	26494727	26494827	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.7664
chr5	74489202	74489564	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr12	17552950	17553087	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	21	-16.1474
chr3	135268101	135268119	protein_coding	Nfkb1	exon	ENSMUSG00000028163	ProperStrand	55	chr11	68886949	68887035	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-4.3090
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr12	60141323	60141390	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-1.7455
chr16	35928111	35928201	protein_coding	Dtx3l	utr3	ENSMUSG00000049502	NonProperStrand	3	chr7	82871349	82871440	protein_coding	Akap13	intron	ENSMUSG00000066406	NonProperStrand	9	1	-inf
chr2	61892317	61892334	protein_coding	Slc4a10	intron	ENSMUSG00000026904	ProperStrand	40	chr17	13112529	13112562	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-5.3659
chr8	13416896	13416912	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr5	144947056	144947185	protein_coding	Lmtk2	utr3	ENSMUSG00000038970	ProperStrand	60	2	-10.4451
chr13	32893960	32894059	protein_coding	Wrnip1	utr5	ENSMUSG00000021400	ProperStrand	16	chr10	110918636	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-9.8426
chr3	85904465	85904556	snoRNA	ENSMUSG00000065847_SNORA32	.	ENSMUSG00000065847	ProperStrand	40	chr3	123210902	123210982	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-4.8201
chr19	4195230	4195330	protein_coding	Ppp1ca	utr3	ENSMUSG00000040385	ProperStrand	40	chr16	23111448	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.8604
chr8	113565562	113566202	protein_coding	Aars	exon	ENSMUSG00000031960	ProperStrand	355	chr6	25638699	25638715	protein_coding	Gpr37	exon	ENSMUSG00000039904	ProperStrand	49	1	-10.1593
chr7	125257639	125257666	protein_coding	Rps15a	intron	ENSMUSG00000008683	ProperStrand	28	chr11	77995188	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-7.7031
chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	chr11	77995189	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-2.5599
chr17	35386272	35386305	protein_coding-noncoding	Ddx39b	utr5	ENSMUSG00000019432	ProperStrand	7	chr6	71832551	71832651	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	2	-15.9959
chr11	116533847	116533893	snoRNA	ENSMUSG00000065640_Snord1c	.	ENSMUSG00000065640	ProperStrand	373	chr18	35714144	35714245	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	7	-7.7789
chr4	134196926	134196942	protein_coding	Man1c1	intron	ENSMUSG00000037306	ProperStrand	22	chr17	24857760	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.1130
chr8	124406134	124406234	protein_coding	Slc7a5	utr3	ENSMUSG00000040010	ProperStrand	166	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	7	-9.1525
chr15	81110991	81111009	SINE	ID4	ID	chr15ID481110956	ProperStrand	272	chr14	54987326	54987478	protein_coding	Oxa1l	exon	ENSMUSG00000000959	ProperStrand	31	1	-11.6171
chr14	27475912	27475955	protein_coding	Arf4	utr3	ENSMUSG00000021877	ProperStrand	14	chr11	69481359	69481459	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	4	-18.4694
chr5	89044066	89045513	protein_coding	Rufy3	exon	ENSMUSG00000029291	ProperStrand	10	chr18	35716850	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-5.5279
chr2	181250364	181250380	protein_coding	Tpd52l2	utr3	ENSMUSG00000000827	ProperStrand	20	chr16	23111392	23111481	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.0472
chr3	40564296	40564312	protein_coding	Hspa4l	exon	ENSMUSG00000025757	NonProperStrand	10	chr7	116664811	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-5.9693
chr9	104083424	104084413	protein_coding	Dnajc13	exon	ENSMUSG00000032560	ProperStrand	60	chr11	6428075	6428165	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.1922
chr7	57041565	57041581	protein_coding	Prmt3	exon	ENSMUSG00000030505	ProperStrand	89	chr7	117190015	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.6310
chr12	111929767	111933814	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr2	26494708	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	4	-0.8901
chr7	4759915	4759952	protein_coding	Ube2s	exon	ENSMUSG00000060860	ProperStrand	62	chr16	23111383	23111447	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.2142
chr1	13131969	13132079	protein_coding	Ncoa2	utr3	ENSMUSG00000005886	ProperStrand	26	chr10	110918674	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-5.0402
chr3	101395102	101395137	protein_coding	Atp1a1	exon	ENSMUSG00000033161	ProperStrand	316	chr1	194571834	194571880	snRNA	ENSMUSG00000064881_U5	.	ENSMUSG00000064881	ProperStrand	187	5	-inf
chr16	44140215	44140277	protein_coding	Naa50	utr5	ENSMUSG00000022698	ProperStrand	56	chr10	110918637	110918686	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-3.5758
chr5	124931197	124931287	LTR	RLTR15	ERVK	chr5RLTR15124931194	ProperStrand	1	chr5	124931396	124931486	SINE	B1_Mus1	Alu	chr5B1_Mus1124931405	ProperStrand	1	1	-inf
chr12	117699558	117699583	protein_coding	Ncapg2	utr3	ENSMUSG00000042029	ProperStrand	20	chr13	51743567	51743662	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	3	-20.2151
chrX	149594987	149595052	protein_coding	Rragb	exon	ENSMUSG00000041658	ProperStrand	1	chr10	80860700	80860717	protein_coding	Nfic	utr3	ENSMUSG00000055053	ProperStrand	69	1	-inf
chr8	108402017	108402058	protein_coding	Nutf2	intron	ENSMUSG00000008450	ProperStrand	39	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-7.9614
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr18	35716762	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-2.2665
chr12	110888796	110888838	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr1	129946825	129946878	protein_coding	Zranb3	intron	ENSMUSG00000036086	ProperStrand	19	1	-10.9946
chr11	51459140	51459455	protein_coding	N4bp3	exon	ENSMUSG00000001053	ProperStrand	45	chrX	131293126	131293143	protein_coding	Armcx3	utr5	ENSMUSG00000049047	NonProperStrand	5	3	-19.8613
chr13	100290220	100290236	lincRNA	Gm17568	exon	ENSMUSG00000090664	NonProperStrand	1	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-inf
chr5	143666070	143666170	protein_coding	Actb	exon	ENSMUSG00000029580	ProperStrand	446	chr1	173041632	173041649	tRNA	tRNA710-ValCAC	.	623586	ProperStrand	206	1	-6.8397
chr16	96391529	96391613	protein_coding	Lca5l	intron	ENSMUSG00000045275	NonProperStrand	210	chr8	32260386	32260423	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-2.3518
chr15	81560306	81560322	protein_coding	Rangap1	utr5	ENSMUSG00000022391	NonProperStrand	35	chr18	63156547	63156596	protein_coding	Napg	exon	ENSMUSG00000024581	ProperStrand	17	1	-16.9834
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	152268927	152269668	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	2	-1.7136
chr9	68614418	68614498	protein_coding	Rora	intron	ENSMUSG00000032238	ProperStrand	25	chr15	72824922	72825012	protein_coding	Trappc9	intron	ENSMUSG00000047921	ProperStrand	44	1	-15.7230
chr4	3762400	3762430	protein_coding	Rps20	exon	ENSMUSG00000028234	ProperStrand	71	chr6	115876313	115876330	protein_coding	Ift122	exon	ENSMUSG00000030323	ProperStrand	20	1	-15.1975
chr5	116012510	116012533	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	chr17	24857732	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-0.7301
chr16	32623171	32623490	protein_coding	Tfrc	exon	ENSMUSG00000022797	ProperStrand	71	chr12	106269352	106269432	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-3.8240
chr9	109806443	109806523	SINE	B3A	B2	chr9B3A109806333	NonProperStrand	1	chrX	84848190	84848280	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	ProperStrand	18	1	-inf
chr11	118900007	118900023	protein_coding	Cbx8	exon	ENSMUSG00000025578	ProperStrand	95	chr7	30231467	30231592	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	2	-12.6563
chr11	116535920	116535982	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr9	65049531	65049578	snRNA	ENSMUSG00000075930_U5	.	ENSMUSG00000075930	ProperStrand	175	2	-6.4887
chr12	17552950	17553040	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr1	145626057	145626138	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-1.2098
chr10	80621431	80621472	protein_coding	Pias4	intron	ENSMUSG00000004934	ProperStrand	43	chr4	131908236	131908297	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.9253
chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	chr2	145076803	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-3.9193
chr11	50110814	50110836	protein_coding	Canx	exon	ENSMUSG00000020368	ProperStrand	296	chr5	92485086	92485196	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	1	-5.5811
chr10	68753824	68753874	protein_coding	Rhobtb1	utr3	ENSMUSG00000019944	ProperStrand	6	chr18	33954827	33954936	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-8.1162
chr2	25915656	25915672	protein_coding	Nacc2	exon	ENSMUSG00000026932	ProperStrand	98	chr15	98350184	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-3.8301
chr1	63225257	63225322	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	chr2	26493366	26493491	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-0.9617
chr11	68922008	68922593	protein_coding	Per1	exon	ENSMUSG00000020893	ProperStrand	46	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-8.2715
chr2	24915691	24915707	protein_coding	Nelf	exon	ENSMUSG00000006476	ProperStrand	40	chr13	73942924	73942955	protein_coding	Slc12a7	exon	ENSMUSG00000017756	ProperStrand	80	1	-13.5546
chr16	11144205	11144404	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr16	23110930	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	NonProperStrand	93	2	-15.1341
chr19	46382075	46382118	protein_coding	Nfkb2	exon	ENSMUSG00000025225	ProperStrand	12	chr14	47915149	47915176	protein_coding	Socs4	utr3	ENSMUSG00000048379	ProperStrand	5	1	-19.3297
chr9	40610692	40610897	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr11	102152289	102152369	protein_coding	Atxn7l3	utr3	ENSMUSG00000059995	ProperStrand	24	1	-9.9875
chr5	120574200	120574227	protein_coding	Rbm19	exon	ENSMUSG00000029594	ProperStrand	40	chr4	131908236	131908342	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.0419
chr8	82208350	82208439	protein_coding	Abce1	utr3	ENSMUSG00000058355	ProperStrand	66	chr1	162967537	162967559	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	9	-20.1269
chr8	124475039	124475056	protein_coding	Banp	intron	ENSMUSG00000025316	ProperStrand	7	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.7768
chr11	48616661	48616706	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	chr1	89673631	89673731	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	17	-19.2635
chr2	5216546	5216578	protein_coding	Camk1d	utr3	ENSMUSG00000039145	ProperStrand	50	chr11	97642952	97643013	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.7879
chr8	114436867	114436921	protein_coding	Tmem231	utr3	ENSMUSG00000031951	ProperStrand	17	chr9	120038561	120038661	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.4412
chr16	91866584	91866603	protein_coding	Itsn1	intron	ENSMUSG00000022957	ProperStrand	172	chr12	70845352	70845408	protein_coding	Atp5s	utr3	ENSMUSG00000054894	ProperStrand	3	1	-17.7048
chr11	83567429	83569213	protein_coding	Heatr6	exon	ENSMUSG00000000976	ProperStrand	67	chr14	55128471	55128700	protein_coding	Prmt5	exon	ENSMUSG00000023110	ProperStrand	72	1	-12.7261
chr2	179628011	179628029	protein_coding	Cdh4	exon	ENSMUSG00000000305	ProperStrand	171	chr19	8963087	8963119	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-0.7794
chr13	103895241	103895257	protein_coding	Mast4	intron	ENSMUSG00000034751	ProperStrand	150	chr11	106362636	106362672	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-5.5971
chr19	47694369	47694469	protein_coding	Slk	exon	ENSMUSG00000025060	ProperStrand	27	chr17	35088957	35088988	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-7.4573
mmu-miR-292a-5p	1	21	miRNA	mmu-miR-292a-5p	.	mmu-miR-292a-5p	ProperStrand	20	chr6	148874582	148874682	protein_coding	Fam60a	exon	ENSMUSG00000039985	ProperStrand	68	1	-15.2825
chr15	79502650	79502719	protein_coding	Tomm22	exon	ENSMUSG00000022427	ProperStrand	7	chr16	23111774	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.9463
chr4	116883455	116883564	snRNA	ENSMUSG00000070237_U5	.	ENSMUSG00000070237	ProperStrand	154	chr18	35714217	35714266	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-1.8267
chr6	33282423	33297841	protein_coding	Exoc4	exon	ENSMUSG00000029763	ProperStrand	120	chr11	68886928	68887008	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-2.8736
chr18	53633345	53633362	protein_coding	Prdm6	exon	ENSMUSG00000069378	ProperStrand	7	chr14	33005065	33005091	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-8.3069
chr10	127787517	127787573	protein_coding	Cs	exon	ENSMUSG00000005683	ProperStrand	63	chr18	35716790	35716828	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.0896
chr4	155331369	155331469	protein_coding	Ube2j2	exon	ENSMUSG00000023286	ProperStrand	35	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-7.6766
chr2	157119950	157120991	protein_coding	Rpn2	exon	ENSMUSG00000027642	ProperStrand	363	chr15	38915922	38915978	protein_coding	Cthrc1	exon	ENSMUSG00000054196	ProperStrand	1	1	-inf
chr6	121423179	121423195	protein_coding	Iqsec3	utr5	ENSMUSG00000040797	NonProperStrand	139	chr3	123210909	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-0.8710
chr1	30999002	30999018	protein_coding	Ptp4a1	utr3	ENSMUSG00000026064	NonProperStrand	2	chr9	15118322	15118360	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-10.7700
chr3	156224612	156224628	lincRNA	4930570G19Rik	exon	ENSMUSG00000085084	ProperStrand	326	chr14	15572355	15572371	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	1	-7.8996
chrX	162627248	162627315	protein_coding	Gemin8	exon	ENSMUSG00000040621	ProperStrand	3	chr16	23110973	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-9.5778
chr1	121496136	121496153	protein_coding	Epb4.1l5	intron	ENSMUSG00000026383	ProperStrand	22	chr1	88252838	88252902	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-8.6544
chr7	112782969	112782985	protein_coding	Arfip2	utr3	ENSMUSG00000030881	ProperStrand	191	chr9	50816824	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	1	-9.4863
chr10	96067564	96067581	LTR	RMER19B	ERVK	chr10RMER19B96067159	ProperStrand	12	chr1	162967513	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-6.6191
chr17	35646434	35647428	protein_coding	Pou5f1	exon	ENSMUSG00000024406	ProperStrand	104	chr16	23111372	23111454	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-1.2881
chr15	100358955	100358972	protein_coding	Tfcp2	exon	ENSMUSG00000009733	NonProperStrand	77	chr17	64642269	64642332	protein_coding	Pja2	exon	ENSMUSG00000024083	ProperStrand	27	1	-14.4200
chr7	30975271	30975361	protein_coding	Capns1	intron	ENSMUSG00000001794	ProperStrand	35	chr8	73419693	73419773	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-10.0673
chr7	149562386	149562460	protein_coding	Ctsd	utr3	ENSMUSG00000007891	ProperStrand	60	chr2	26493366	26493466	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-3.7425
chr8	122475874	122475893	protein_coding	Usp10	exon	ENSMUSG00000031826	NonProperStrand	4	chr2	32818820	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-11.0985
chr13	107737212	107737228	protein_coding	Dimt1	utr5	ENSMUSG00000021692	ProperStrand	185	chr17	31640574	31640590	protein_coding	Wdr4	exon	ENSMUSG00000024037	NonProperStrand	18	1	-13.4972
chr7	19840852	19840932	protein_coding-noncoding	Opa3	utr5	ENSMUSG00000052214	NonProperStrand	1	chr7	19840602	19840692	protein_coding	Opa3	intron	ENSMUSG00000052214	NonProperStrand	3	1	-inf
chr2	30163237	30164771	protein_coding	Nup188	exon	ENSMUSG00000052533	ProperStrand	96	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.7459
chr6	11895493	11895517	protein_coding	Phf14	intron	ENSMUSG00000029629	NonProperStrand	6	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.7876
chr19	7497769	7497808	protein_coding	2700081O15Rik	utr3	ENSMUSG00000053080	ProperStrand	9	chr5	130300483	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-10.1381
chr6	92442761	92442779	protein_coding	Prickle2	intron	ENSMUSG00000030020	ProperStrand	13	chr9	120039581	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-6.2868
chr2	22445475	22445535	protein_coding	Myo3a	intron	ENSMUSG00000025716	NonProperStrand	7	chr5	108336397	108336497	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-9.2393
chr14	14951468	14951568	protein_coding	Psmd6	intron	ENSMUSG00000021737	ProperStrand	10	chr7	29136535	29136598	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.7572
chr15	74394262	74394279	miRNA	AC117657.1	.	ENSMUSG00000093340	ProperStrand	10	chr4	149070530	149070547	protein_coding	Pik3cd	intron	ENSMUSG00000039936	NonProperStrand	17	1	-19.5107
chr4	53284233	53284333	Other	RMER1A	Other	chr4RMER1A53284240	ProperStrand	15	chr16	23111708	23111837	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	14	-inf
chr2	124936361	124939618	protein_coding	Myef2	exon	ENSMUSG00000027201	ProperStrand	19	chr3	68889030	68889120	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	2	-8.9937
chr5	35440894	35440912	protein_coding	Lrpap1	exon	ENSMUSG00000029103	ProperStrand	43	chr2	32818870	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-6.1258
chr13	38602007	38602050	protein_coding	Txndc5	exon	ENSMUSG00000038991	ProperStrand	48	chr2	26494708	26494773	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.5138
chr12	52873307	52873423	protein_coding	Hectd1	exon	ENSMUSG00000035247	ProperStrand	41	chr14	33005046	33005188	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	2	-7.8339
chr9	20575105	20591978	protein_coding	Col5a3	utr3	ENSMUSG00000004098	ProperStrand	47	chr16	23110869	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-3.1482
chr18	20737676	20737693	protein_coding	Dsg2	exon	ENSMUSG00000044393	ProperStrand	60	chr17	35299507	35299642	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-4.7772
chr11	4161872	4161962	protein_coding	Lif	intron	ENSMUSG00000034394	ProperStrand	3	chr7	152465085	152465175	protein_coding	Tpcn2	intron	ENSMUSG00000048677	NonProperStrand	4	1	-inf
chr6	29077833	29078433	protein_coding	Rbm28	exon	ENSMUSG00000029701	ProperStrand	24	chr18	35716754	35716844	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-12.7042
chr4	133164282	133164382	protein_coding	Zdhhc18	utr3	ENSMUSG00000037553	ProperStrand	51	chr11	97642944	97642992	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	10	-20.5516
chr10	126958123	126958161	protein_coding	Shmt2	exon	ENSMUSG00000025403	ProperStrand	94	chr13	21845525	21845591	protein_coding	Hist1h2ak	exon	ENSMUSG00000063021	ProperStrand	30	2	-19.7278
chr2	94258416	94258525	protein_coding	Api5	exon	ENSMUSG00000027193	ProperStrand	51	chr2	130102054	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-5.6746
chr9	95525010	95525035	antisense	Gm16126	.	ENSMUSG00000086585	NonProperStrand	229	chr13	58279372	58280672	protein_coding	Ubqln1	exon	ENSMUSG00000005312	ProperStrand	49	4	-inf
chr8	75094784	75094909	protein_coding	9130011J15Rik	exon	ENSMUSG00000044600	ProperStrand	9	chr18	35716762	35716881	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-9.5374
chr9	45715187	45715203	protein_coding	Pcsk7	intron	ENSMUSG00000035382	ProperStrand	8	chr16	23110843	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.2180
chr7	50690726	50690742	protein_coding	Lim2	exon	ENSMUSG00000004613	NonProperStrand	50	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	2	-12.1248
chr5	139724051	139724396	protein_coding	Sun1	exon	ENSMUSG00000036817	ProperStrand	108	chr12	17552968	17553048	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	20	-19.5897
chr16	96349210	96349310	protein_coding	Hmgn1	utr5	ENSMUSG00000040681	ProperStrand	38	chr9	64143821	64143874	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	2	-13.8254
chr16	87405857	87418791	protein_coding	Ltn1	exon	ENSMUSG00000052299	ProperStrand	49	chr16	23111372	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	7	-13.0556
chr19	46386180	46386276	protein_coding	Nfkb2	exon	ENSMUSG00000025225	ProperStrand	12	chr4	117568858	117568875	protein_coding	Ipo13	intron	ENSMUSG00000033365	ProperStrand	48	1	-16.9933
chr7	13516168	13516205	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr19	8810510	8810543	protein_coding	Wdr74	exon	ENSMUSG00000042729	ProperStrand	15	1	-11.4819
chr12	56966968	56966986	protein_coding	Brms1l	utr3	ENSMUSG00000012076	NonProperStrand	12	chr10	7527096	7530168	protein_coding	Ppil4	exon	ENSMUSG00000015757	ProperStrand	18	3	-19.2523
chr9	30913620	30913710	protein_coding	St14	exon	ENSMUSG00000031995	ProperStrand	90	chr10	23505200	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-0.7341
chr2	79843543	79843559	protein_coding	Pde1a	intron	ENSMUSG00000059173	NonProperStrand	275	chr4	131865855	131865952	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-0.8109
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-2.3451
chr5	45401527	45401617	LINE	L1Md_F2	L1	chr5L1Md_F245401408	NonProperStrand	7	chr7	10802598	10802678	LINE	L1Md_F2	L1	chr7L1Md_F210802299	NonProperStrand	1	1	-inf
chr5	145532284	145532321	protein_coding	Trrap	intron	ENSMUSG00000045482	ProperStrand	399	chr7	117166764	117166854	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-1.4952
chr5	143666299	143666379	protein_coding	Actb	exon	ENSMUSG00000029580	ProperStrand	446	chr9	107647301	107647471	protein_coding	Rbm5	exon	ENSMUSG00000032580	ProperStrand	19	1	-11.6273
chr9	114598054	114598144	protein_coding	Dync1li1	exon	ENSMUSG00000032435	ProperStrand	33	chr12	60141322	60141402	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-8.0247
chr4	129802995	129803014	protein_coding	Pef1	exon	ENSMUSG00000028779	ProperStrand	16	chr9	99483993	99484009	protein_coding	Dbr1	exon	ENSMUSG00000032469	ProperStrand	162	1	-14.0135
chr17	80833224	80833262	protein_coding	Sos1	exon	ENSMUSG00000024241	ProperStrand	10	chr16	23110828	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.7978
chr2	32817343	32818626	protein_coding-noncoding	Rpl12	utr5	ENSMUSG00000038900	ProperStrand	68	chr2	32817282	32818513	protein_coding	Rpl12	exon	ENSMUSG00000038900	ProperStrand	167	4	-19.2707
chr3	67943162	67943184	protein_coding	Schip1	intron	ENSMUSG00000027777	ProperStrand	70	chr17	35299504	35299547	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-4.4815
chr8	75687960	75687979	protein_coding	Large	intron	ENSMUSG00000004383	NonProperStrand	16	chr16	23111452	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.4608
chr7	143270017	143270036	LINE	L1_Mur3	L1	chr7L1_Mur3143269356	NonProperStrand	1	chr16	11144177	11144277	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	1	-inf
chr7	87361864	87361893	protein_coding	Sema4b	exon	ENSMUSG00000030539	ProperStrand	54	chr18	35716845	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.3452
chr17	56574007	56574366	protein_coding	Ptprs	exon	ENSMUSG00000013236	NonProperStrand	4	chr9	15119302	15119392	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	NonProperStrand	3	1	-inf
chr8	74059722	74059812	protein_coding	Bst2	intron	ENSMUSG00000046718	ProperStrand	15	chr5	130300460	130300540	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-5.1031
chrX	104379251	104379341	LINE	L1Md_F	L1	chrXL1Md_F104378657	NonProperStrand	1	chrX	162050052	162050142	LTR	MERVL_2A-int	ERVL	chrXMERVL_2A-int162050056	NonProperStrand	1	1	-inf
chr8	127384962	127385062	protein_coding	2810004N23Rik	exon	ENSMUSG00000031984	ProperStrand	22	chr2	63936036	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-9.8854
chr15	94416715	94416736	protein_coding	Twf1	intron	ENSMUSG00000022451	ProperStrand	32	chr11	62416599	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-6.4040
chr2	164521970	164521987	SINE	B4A	B4	chr2B4A164521909	ProperStrand	41	chr1	182509370	182509386	protein_coding	Parp1	exon	ENSMUSG00000026496	ProperStrand	227	1	-11.4135
chr6	17523427	17523501	protein_coding	Met	utr3	ENSMUSG00000009376	ProperStrand	32	chr2	158182214	158182291	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-6.2371
chr11	95926471	95926512	protein_coding	Ube2z	exon	ENSMUSG00000014349	ProperStrand	41	chr7	133726521	133726538	protein_coding	Cln3	exon	ENSMUSG00000030720	ProperStrand	87	1	-13.3360
chr6	129068581	129068602	protein_coding	Klrb1-ps1	intron	ENSMUSG00000079295	ProperStrand	1	chr10	110918547	110918659	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-inf
chr10	80100951	80100995	protein_coding	Csnk1g2	exon	ENSMUSG00000003345	ProperStrand	28	chr13	78138923	78145688	protein_coding	Fam172a	exon	ENSMUSG00000064138	ProperStrand	17	2	-20.9088
chr5	121655052	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	chr7	52382753	52382806	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	7	-1.1949
chr4	131908443	131908477	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr13	21872134	21872195	protein_coding	Hist1h1b	exon	ENSMUSG00000058773	ProperStrand	65	3	-16.0308
chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	chr1	162966813	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-1.9190
chr5	74489215	74489295	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr19	6277284	6277374	protein_coding	Ehd1	exon	ENSMUSG00000024772	ProperStrand	30	1	-6.9960
chr14	71064364	71064419	protein_coding	Xpo7	utr3	ENSMUSG00000022100	ProperStrand	109	chr5	74489595	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-2.6996
chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	chr19	8800084	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-4.6400
chr6	51444575	51444665	LTR	RMER19C	ERVK	chr6RMER19C51444601	ProperStrand	1	chr6	51444477	51444557	SINE	PB1D7	Alu	chr6PB1D751444452	ProperStrand	1	1	-inf
chr8	55606715	55606783	antisense	Spcs3	.	ENSMUSG00000054408	ProperStrand	30	chr4	59233114	59233145	protein_coding	Ugcg	exon	ENSMUSG00000028381	ProperStrand	19	3	-19.8718
chr11	101466255	101466351	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	chr9	120039533	120039628	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	3	-1.2178
chr13	67217198	67217215	LTR	RLTR9E	ERVK	chr13RLTR9E67216909	NonProperStrand	9	chr11	62416600	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-8.9986
chr9	59160971	59161007	protein_coding	Adpgk	exon	ENSMUSG00000025236	ProperStrand	19	chr1	145506238	145506255	protein_coding	Cdc73	intron	ENSMUSG00000026361	NonProperStrand	26	1	-17.2880
chr14	125100307	125100397	LINE	L1_Mus2	L1	chr14L1_Mus2125100023	ProperStrand	1	chr1	19510442	19510532	LINE	L1_Mus2	L1	chr1L1_Mus219509944	ProperStrand	1	1	-inf
chr2	90235294	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr15	73416617	73416633	protein_coding	Slc45a4	exon	ENSMUSG00000079020	ProperStrand	127	2	-5.2884
chr15	95856045	95856062	LINE	L1_Rod	L1	chr15L1_Rod95855901	NonProperStrand	12	chr8	73419657	73419776	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-6.2451
chr11	102468343	102468360	protein_coding	Fzd2	utr3	ENSMUSG00000050288	ProperStrand	15	chr9	120037913	120038003	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	2	-12.0414
chr11	72730046	72730062	protein_coding	Zzef1	exon	ENSMUSG00000055670	NonProperStrand	16	chr11	98878344	98878365	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-8.9452
chr7	80547651	80547667	protein_coding	Rgma	intron	ENSMUSG00000070509	ProperStrand	46	chr11	106362304	106362320	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-6.3668
chr6	122657800	122657827	protein_coding	Nanog	exon	ENSMUSG00000012396	ProperStrand	66	chr16	23111741	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.7539
chr12	113416497	113416597	protein_coding	Kif26a	exon	ENSMUSG00000021294	ProperStrand	8	chr2	18508668	18508705	tRNA	tRNA1947-AsnGTT	.	374341	ProperStrand	179	1	-15.2301
chr9	72569167	72595832	protein_coding	Nedd4	exon	ENSMUSG00000032216	ProperStrand	308	chr7	116663634	116663759	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-0.8294
chr15	31405509	31405599	protein_coding	March6	intron	ENSMUSG00000039100	ProperStrand	94	chr4	131908292	131908372	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.8340
chr13	9833552	9833651	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr11	102294588	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	1	-1.1596
chr9	107814249	107814420	protein_coding	Mst1r	exon	ENSMUSG00000032584	ProperStrand	2	chr2	144087414	144087466	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-13.9887
chr11	104411760	104411824	protein_coding	Cdc27	utr5	ENSMUSG00000020687	ProperStrand	24	chrX	56358179	56358196	protein_coding	Fgf13	intron	ENSMUSG00000031137	ProperStrand	39	1	-15.9919
chr5	39060423	39064903	protein_coding	Zfp518b	utr3	ENSMUSG00000046572	ProperStrand	95	chr7	116664794	116664921	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-3.2870
chr7	134341340	134341357	protein_coding	Tbc1d10b	utr3	ENSMUSG00000042492	ProperStrand	187	chr1	89681129	89681176	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-3.2904
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr19	60302441	60302457	protein_coding	D19Ertd737e	utr5	ENSMUSG00000057858	ProperStrand	3	1	-13.2786
chr6	85390678	85391581	protein_coding	Smyd5	exon	ENSMUSG00000033706	ProperStrand	107	chr4	41150095	41150126	snoRNA	ENSMUSG00000089265_SNORD121A	.	ENSMUSG00000089265	ProperStrand	370	1	-8.5107
chr9	115219437	115219474	protein_coding	Stt3b	utr5	ENSMUSG00000032437	ProperStrand	66	chr2	130103751	130103808	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-8.2808
chr10	93799501	93799519	protein_coding	Tmcc3	intron	ENSMUSG00000020023	ProperStrand	23	chr1	192712615	192712631	protein_coding	Rps6kc1	exon	ENSMUSG00000089872	ProperStrand	241	1	-12.4670
chr1	103921139	103921229	LINE	L1_Mur1	L1	chr1L1_Mur1103918856	NonProperStrand	1	chr1	103921475	103921555	LINE	Lx3A	L1	chr1Lx3A103921328	NonProperStrand	1	1	-inf
chr10	70690524	70690549	protein_coding	Tfam	utr3	ENSMUSG00000003923	ProperStrand	13	chr9	120039533	120039604	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-10.2921
chr17	39390817	39390833	LTR	MMERVK10C-int	ERVK	chr17MMERVK10C-int39390398	NonProperStrand	11	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-6.5834
chr14	119693352	119693368	protein_coding	Hs6st3	intron	ENSMUSG00000053465	NonProperStrand	134	chr17	35089183	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-3.9457
chr6	72185273	72185292	protein_coding	Atoh8	utr5	ENSMUSG00000037621	NonProperStrand	61	chr7	29136525	29136579	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-4.1557
chr1	95532125	95532189	protein_coding	Stk25	utr5	ENSMUSG00000026277	ProperStrand	6	chr11	116703717	116703744	protein_coding	Jmjd6	exon	ENSMUSG00000056962	ProperStrand	92	2	-20.6102
chr8	127420981	127421081	protein_coding	Exoc8	exon	ENSMUSG00000074030	ProperStrand	4	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-9.1328
chr12	92811869	92811973	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	chr1	89673684	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	7	-3.9510
chr7	73185429	73185446	protein_coding	Pcsk6	intron	ENSMUSG00000030513	NonProperStrand	9	chr12	29318645	29318669	protein_coding	Rps7	exon	ENSMUSG00000061477	ProperStrand	129	1	-15.6638
chr9	65127126	65127142	protein_coding	Cilp	exon	ENSMUSG00000042254	ProperStrand	212	chr1	93263065	93263082	protein_coding	Fam132b	exon	ENSMUSG00000047443	NonProperStrand	98	1	-9.7967
chr4	43549121	43549211	protein_coding	Tln1	exon	ENSMUSG00000028465	ProperStrand	101	chr16	23110470	23110550	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	16	-20.4793
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr11	62416963	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-4.1727
chr4	147589546	147589563	DNA	MER91B	Tip100	chr4MER91B147589497	NonProperStrand	9	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-9.0452
chr13	55549268	55549285	protein_coding	Grk6	intron	ENSMUSG00000074886	NonProperStrand	5	chr8	32260340	32260422	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-9.7163
chr2	60130288	60130328	protein_coding	Ly75	utr3	ENSMUSG00000026980	ProperStrand	59	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-7.0163
chr12	68764572	68764604	LINE	L1_Mus2	L1	chr12L1_Mus268763857	NonProperStrand	5	chr12	17552960	17553031	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	5	-inf
chr2	158451026	158451043	protein_coding	Actr5	exon	ENSMUSG00000037761	NonProperStrand	94	chr11	69483136	69483229	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.7212
chr12	64567395	64567424	LINE	L1Md_F2	L1	chr12L1Md_F264562791	NonProperStrand	1	chr11	97643002	97643092	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-inf
chr12	104663677	104663695	protein_coding	Ddx24	intron	ENSMUSG00000041645	NonProperStrand	23	chr1	88247766	88247876	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-6.9949
chr14	61398407	61398423	protein_coding	C1qtnf9	exon	ENSMUSG00000071347	ProperStrand	187	chrX	71517833	71517907	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-4.3374
chr7	105866105	105866123	protein_coding	Prkrir	utr3	ENSMUSG00000030753	ProperStrand	12	chr7	117166721	117166858	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	6	-19.6453
chr11	97889733	97890792	protein_coding	Rpl19	exon	ENSMUSG00000017404	ProperStrand	120	chr8	73419700	73419790	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-3.5290
chr1	71694653	71695790	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr6	115758037	115758117	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-0.8314
chr14	78855181	78855271	LTR	ORR1C1	MaLR	chr14ORR1C178854917	ProperStrand	1	chr6	67101800	67101890	lincRNA	A430010J10Rik	intron	ENSMUSG00000091724	ProperStrand	2	1	-inf
chr4	131908363	131908467	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr2	63936035	63936053	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-2.1431
chr11	120148960	120148976	protein_coding	Bahcc1	exon	ENSMUSG00000039741	NonProperStrand	268	chr9	15118322	15118357	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-1.0555
chr7	150444700	150444790	protein_coding	Kcnq1	intron	ENSMUSG00000009545	ProperStrand	59	chr7	138346799	138346879	protein_coding	Fgfr2	intron	ENSMUSG00000030849	ProperStrand	100	1	-12.3217
chr7	57041565	57041581	protein_coding	Prmt3	exon	ENSMUSG00000030505	ProperStrand	89	chr11	59918625	59918641	protein_coding	Rai1	utr5	ENSMUSG00000062115	NonProperStrand	81	1	-11.9181
chr6	70794802	70794820	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chr18	63908609	63908625	protein_coding	Wdr7	intron	ENSMUSG00000040560	NonProperStrand	180	1	-9.2196
chr4	147382943	147383033	protein_coding	Clcn6	intron	ENSMUSG00000029016	ProperStrand	120	chr19	8963106	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.2177
chr9	57638387	57638461	protein_coding	Arid3b	utr3	ENSMUSG00000004661	ProperStrand	39	chr7	51505507	51505592	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	8	-21.4273
chr7	26490080	26490098	protein_coding	Tgfb1	utr3	ENSMUSG00000002603	ProperStrand	17	chr11	69483136	69483193	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.7874
chr11	65115288	65115307	lincRNA	Gm12295	intron	ENSMUSG00000085162	ProperStrand	3	chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	1	-15.2304
chr4	100843857	100843947	protein_coding	Jak1	exon	ENSMUSG00000028530	ProperStrand	30	chr16	23110912	23110992	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0481
chr8	129468758	129468869	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	chr7	67123693	67123738	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	1	-1.2134
chr14	32935972	32936052	SINE	B1_Mus2	Alu	chr14B1_Mus232935987	ProperStrand	1	chr14	32936140	32936230	SINE	RSINE1	B4	chr14RSINE132936163	ProperStrand	1	1	-inf
chr8	91187864	91187964	protein_coding	Nod2	exon	ENSMUSG00000055994	ProperStrand	4	chr13	96100646	96100694	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	1	-13.7392
chr10	79595464	79595523	protein_coding-noncoding	Dos	utr3	ENSMUSG00000035640	ProperStrand	13	chr18	35714175	35714265	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-6.4211
chr2	4646011	4646087	protein_coding	Bend7	intron	ENSMUSG00000048186	ProperStrand	15	chr16	23111731	23111821	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.3973
chr17	27236036	27236052	protein_coding	Itpr3	exon	ENSMUSG00000042644	ProperStrand	137	chr11	106362304	106362331	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-4.2484
chr7	125876531	125876593	protein_coding-noncoding	6330503K22Rik	utr5	ENSMUSG00000033904	ProperStrand	1	chr8	25656321	25656338	protein_coding	Ido2	intron	ENSMUSG00000031549	NonProperStrand	29	1	-inf
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr17	46861595	46861611	protein_coding	Pex6	exon	ENSMUSG00000002763	ProperStrand	292	1	-5.5846
chr11	6519838	6519918	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	chr18	74938044	74938134	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	ProperStrand	1022	1	-2.5399
chr8	108370269	108370615	protein_coding	Cenpt	exon	ENSMUSG00000036672	ProperStrand	13	chr11	97642952	97643032	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-5.3468
chr19	24169803	24169859	protein_coding	Tjp2	utr3	ENSMUSG00000024812	ProperStrand	63	chr13	112496787	112496847	protein_coding	Mier3	intron	ENSMUSG00000032727	ProperStrand	11	1	-16.6384
chr19	7432556	7432618	protein_coding	AI846148	utr3	ENSMUSG00000024970	ProperStrand	17	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	2	-18.3916
chr13	114814445	114814462	protein_coding	Arl15	intron	ENSMUSG00000042348	NonProperStrand	19	chr16	23111392	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-5.4620
chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr7	117166722	117166857	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	6	-5.2791
chr19	9968164	9968247	protein_coding	Incenp	exon	ENSMUSG00000024660	ProperStrand	111	chr18	73693111	73693137	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-4.3379
chr10	75955660	75956196	protein_coding	Mcm3ap	exon	ENSMUSG00000001150	ProperStrand	95	chr11	97642952	97643009	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.7248
chr16	41870322	41870339	protein_coding	Lsamp	intron	ENSMUSG00000061080	NonProperStrand	19	chr2	26768049	26768102	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	1	-10.7207
chr12	112543226	112543297	protein_coding	Cdc42bpb	exon	ENSMUSG00000021279	ProperStrand	128	chr4	131866167	131866257	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-2.3216
chr4	116826445	116826464	protein_coding	Rps8	utr3	ENSMUSG00000047675	ProperStrand	262	chrX	93136011	93136027	protein_coding	Las1l	exon	ENSMUSG00000057421	ProperStrand	248	1	-7.5242
chr6	71444108	71444129	protein_coding	Rnf103	utr5	ENSMUSG00000052656	NonProperStrand	11	chr8	73419656	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-6.4238
chr9	64022855	64022918	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	chr10	39978300	39978390	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	16	-19.1566
chr2	43528255	43528271	protein_coding	Kynu	exon	ENSMUSG00000026866	NonProperStrand	8	chr9	120038467	120038529	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-6.9869
chr3	88715213	88715230	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr1	162965982	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	7	-1.7521
chr5	77713603	77713683	protein_coding	Rest	utr3	ENSMUSG00000029249	ProperStrand	136	chr11	69481335	69481425	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	3	-5.0798
chr8	122129036	122129052	protein_coding	Taf1c	utr5	ENSMUSG00000031832	ProperStrand	26	chr19	8326745	8326782	protein_coding	Slc22a29	intron	ENSMUSG00000075044	ProperStrand	4	1	-19.7365
chr17	39980024	39980075	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	NonProperStrand	5	chr4	43505746	43505846	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	NonProperStrand	174	1	-16.3168
chr6	142723862	142723967	protein_coding	Cmas	utr3	ENSMUSG00000030282	ProperStrand	14	chr19	8798772	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	4	-inf
chr2	37519395	37519415	protein_coding	Strbp	intron	ENSMUSG00000026915	ProperStrand	90	chr2	144087420	144087448	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-5.7472
chr2	90235287	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr16	23111485	23111506	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	2	-1.8210
chr2	109731085	109731103	protein_coding	Lin7c	intron	ENSMUSG00000027162	ProperStrand	15	chr5	122691914	122691930	protein_coding	Hvcn1	utr3	ENSMUSG00000064267	ProperStrand	182	1	-13.9115
chr5	100855944	100855974	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr3	68820057	68820122	protein_coding	Smc4	exon	ENSMUSG00000034349	ProperStrand	21	1	-8.7468
chr1	95405662	95405752	protein_coding	Sept2	utr3	ENSMUSG00000026276	ProperStrand	136	chr1	89673591	89673671	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-1.8665
chr16	11144104	11144196	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr9	70616194	70616218	protein_coding	Adam10	intron	ENSMUSG00000054693	ProperStrand	12	1	-13.7445
chr1	121367231	121367251	protein_coding	Ralb	utr3	ENSMUSG00000004451	ProperStrand	17	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-10.7134
chr3	137529533	137529550	protein_coding	H2afz	utr3	ENSMUSG00000037894	ProperStrand	72	chr7	116664867	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.2404
chr18	35989606	35989624	protein_coding	Cxxc5	utr5	ENSMUSG00000046668	ProperStrand	30	chr16	23110911	23110981	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.0885
chr13	60703911	60797645	protein_coding	Dapk1	exon	ENSMUSG00000021559	ProperStrand	109	chr19	8799834	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-3.8124
chr13	54691737	54692089	protein_coding	Higd2a	exon	ENSMUSG00000025868	ProperStrand	5	chr18	35716685	35716775	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-6.9999
chr9	15119639	15119970	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	chr15	79908928	79909019	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	55	-inf
chr7	117189864	117189943	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr11	106362669	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	3	-3.2461
chr4	129662259	129662275	protein_coding	Bai2	utr5	ENSMUSG00000028782	ProperStrand	119	chr16	23110477	23110577	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.3833
chr1	123326261	123326341	SINE	B3	B2	chr1B3123326187	NonProperStrand	1	chr19	46617387	46617477	protein_coding	Arl3	intron	ENSMUSG00000025035	NonProperStrand	1	1	-inf
chr11	3426352	3426368	protein_coding	Smtn	exon	ENSMUSG00000020439	ProperStrand	222	chr10	39978307	39978371	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-3.0000
chr12	52475148	52475164	protein_coding	G2e3	utr3	ENSMUSG00000035293	NonProperStrand	4	chr7	134671383	134671452	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	4	-inf
chr17	24607587	24607677	protein_coding	Pgp	exon	ENSMUSG00000043445	ProperStrand	35	chr19	8963090	8963170	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	32	-inf
chr19	8799830	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	NonProperStrand	3	chr5	108336363	108336422	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	NonProperStrand	8	1	-20.4785
chr16	58466187	58466277	protein_coding	Dcbld2	utr3	ENSMUSG00000035107	ProperStrand	56	chr7	29136533	29136613	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.4821
chr6	67217306	67231655	protein_coding	Serbp1	exon	ENSMUSG00000036371	ProperStrand	261	chr7	29136546	29136626	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-0.9476
chr2	90235304	90235341	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	67128079	67128124	protein_coding	Snrpn	utr3	ENSMUSG00000000948	ProperStrand	32	1	-5.6851
chr10	74106511	74106527	protein_coding	Pcdh15	exon	ENSMUSG00000052613	ProperStrand	33	chr7	35719755	35730665	protein_coding	Pepd	exon	ENSMUSG00000063931	ProperStrand	12	1	-17.7203
chr14	75772216	75772233	LTR	RLTR9E	ERVK	chr14RLTR9E75772140	NonProperStrand	1	chr7	29136525	29136575	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-inf
chr11	101833237	101833253	protein_coding	Dusp3	utr3	ENSMUSG00000003518	NonProperStrand	8	chr5	108336377	108336467	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-8.9530
chr3	153575089	153575120	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	chr3	130431722	130431972	protein_coding	Rpl34	exon	ENSMUSG00000062006	ProperStrand	51	1	-8.8213
chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	chr13	91062777	91063193	protein_coding	Rps23	utr5	ENSMUSG00000049517	ProperStrand	34	1	-10.4149
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	80204234	80204250	protein_coding	Impg1	intron	ENSMUSG00000032343	ProperStrand	7	1	-8.8025
chr11	83296416	83296517	protein_coding	Taf15	intron	ENSMUSG00000020680	ProperStrand	60	chr4	56910496	56910546	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-6.1068
chr16	85802547	85802564	protein_coding	Adamts1	exon	ENSMUSG00000022893	ProperStrand	102	chr2	31924012	31924028	protein_coding	Fam78a	utr3	ENSMUSG00000050592	NonProperStrand	340	1	-8.7746
chr5	114894310	114895414	protein_coding	Mvk	utr5	ENSMUSG00000041939	ProperStrand	4	chr13	23647235	23647325	protein_coding	Hist1h1d	exon	ENSMUSG00000052565	ProperStrand	78	2	-20.8422
chr6	126743580	126743598	SINE	MIRb	MIR	chr6MIRb126743454	ProperStrand	18	chr9	35310991	35311657	protein_coding	Cdon	exon	ENSMUSG00000038119	ProperStrand	33	1	-16.8216
chr7	107511834	107511854	protein_coding	Ppme1	intron	ENSMUSG00000030718	NonProperStrand	5	chr16	23110506	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-12.1577
chr1	43149339	43149357	protein_coding	Tgfbrap1	intron	ENSMUSG00000070939	NonProperStrand	1	chr11	97643001	97643018	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-inf
chr7	52958453	52958469	protein_coding	Car11	exon	ENSMUSG00000003273	NonProperStrand	250	chr10	80642400	80642487	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-3.3756
chr2	30302608	30302708	protein_coding	Ppp2r4	utr3	ENSMUSG00000039515	ProperStrand	76	chr16	23111391	23111446	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.9513
chr2	69776228	69776285	protein_coding	Ubr3	exon	ENSMUSG00000044308	ProperStrand	62	chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	1	-8.5273
chr4	44038356	44038372	protein_coding	Clta	exon	ENSMUSG00000028478	ProperStrand	59	chr17	35299507	35299533	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-4.8096
chr10	80640512	80643079	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr19	8799581	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	5	-4.4782
chr4	92324403	92324420	LTR	RLTR20B3	ERVK	chr4RLTR20B392324279	ProperStrand	4	chr16	23110828	23110890	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.6489
chr11	6428097	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	NonProperStrand	91	chr14	76247711	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	NonProperStrand	16	4	-20.6154
chr1	88426075	88426339	protein_coding	Ptma	exon	ENSMUSG00000026238	ProperStrand	385	chr18	35102297	35102319	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	3	-7.7226
chr17	66479256	66497068	protein_coding	Ddx11	utr5	ENSMUSG00000035842	ProperStrand	22	chr12	112779164	112779276	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	2	-10.9434
chr8	123102746	123102800	protein_coding	Gse1	utr3	ENSMUSG00000031822	ProperStrand	97	chr14	76247753	76247792	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-5.6141
chr7	52382237	52382315	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	chr7	116664794	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	9	-2.7409
chrX	71517822	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	chr2	166890840	166890858	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	1	-3.7277
chr9	36516692	36516735	protein_coding	Chek1	utr3	ENSMUSG00000032113	ProperStrand	3	chr16	23110989	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr11	116704533	116704549	protein_coding	Jmjd6	utr5	ENSMUSG00000056962	ProperStrand	92	chr11	98878344	98878407	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-5.4461
chr19	16215772	16215844	protein_coding	Gnaq	intron	ENSMUSG00000024639	ProperStrand	38	chr4	131866154	131866244	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	5	-18.1608
chr15	81872703	81872760	protein_coding	Nhp2l1	exon	ENSMUSG00000063480	ProperStrand	40	chr1	88247743	88247799	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-5.8908
chr1	63226096	63226150	protein_coding	Eef1b2	exon	ENSMUSG00000025967	ProperStrand	106	chr7	117190026	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-4.1404
chr2	181384908	181385798	protein_coding	Prpf6	exon	ENSMUSG00000002455	ProperStrand	54	chr11	4983549	4985925	protein_coding	Ewsr1	exon	ENSMUSG00000009079	ProperStrand	248	2	-16.6876
chr2	158451026	158451043	protein_coding	Actr5	exon	ENSMUSG00000037761	NonProperStrand	94	chr19	8963052	8963164	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-4.5351
chr8	13416895	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr2	26494708	26494843	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	13	-1.7617
mmu-miR-2137	0	20	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	chr5	136611800	136611816	protein_coding	Lrwd1	exon	ENSMUSG00000029703	NonProperStrand	51	2	-18.2765
chr4	147940439	147940526	protein_coding	Exosc10	exon	ENSMUSG00000017264	ProperStrand	20	chr11	63885336	63887052	protein_coding	Cox10	exon	ENSMUSG00000042148	NonProperStrand	187	1	-13.2647
chr13	46979110	46979126	protein_coding	Kif13a	intron	ENSMUSG00000021375	NonProperStrand	25	chr4	131865483	131865515	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-5.6979
chr1	157405801	157405877	protein_coding	Acbd6	exon	ENSMUSG00000033701	ProperStrand	10	chr18	35714217	35714264	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	3	-16.1730
chr1	83019051	83019068	protein_coding	Slc19a3	exon	ENSMUSG00000038496	NonProperStrand	20	chr16	23111690	23111734	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.8417
chr11	98860601	98867438	protein_coding	Top2a	exon	ENSMUSG00000020914	ProperStrand	324	chr16	23111722	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	9	-5.4134
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr2	26768369	26768433	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-0.8868
chr13	56229718	56229778	protein_coding	H2afy	exon	ENSMUSG00000015937	ProperStrand	103	chr4	131908356	131908456	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.7317
chr9	23211249	23211265	protein_coding	Bmper	exon	ENSMUSG00000031963	ProperStrand	16	chr7	34990839	34990899	protein_coding	Gpi1	exon	ENSMUSG00000036427	ProperStrand	288	1	-12.8561
chr11	101439266	101441913	protein_coding	Nbr1	exon	ENSMUSG00000017119	ProperStrand	91	chr8	108380495	108380536	protein_coding	Thap11	utr3	ENSMUSG00000036442	ProperStrand	34	13	-20.3182
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr13	49779666	49779742	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-1.8466
chr2	59762746	59762806	protein_coding	Baz2b	exon	ENSMUSG00000026987	ProperStrand	15	chr16	23110829	23110873	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.0842
chr10	89265822	89265896	protein_coding	Uhrf1bp1l	exon	ENSMUSG00000019951	ProperStrand	28	chr4	131866642	131866673	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	2	-16.7291
chr8	74491852	74491948	protein_coding	Zfp961	exon	ENSMUSG00000052446	ProperStrand	35	chr15	79913288	79913346	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.6121
chr2	84530865	84531297	protein_coding	Zdhhc5	exon	ENSMUSG00000034075	NonProperStrand	144	chr7	116663633	116663685	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.1619
chr10	8449954	8450044	protein_coding	Sash1	exon	ENSMUSG00000015305	ProperStrand	23	chr10	23505198	23505278	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.7622
chr9	44630893	44630909	protein_coding	Mll1	exon	ENSMUSG00000002028	NonProperStrand	26	chr8	64017614	64028377	protein_coding	Palld	exon	ENSMUSG00000058056	NonProperStrand	125	1	-13.5299
chr19	43799846	43799887	protein_coding	Entpd7	exon	ENSMUSG00000025192	ProperStrand	3	chr11	69483136	69483197	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-inf
chr10	80952702	80952802	protein_coding	Ncln	exon	ENSMUSG00000020238	NonProperStrand	18	chr16	23110963	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	NonProperStrand	93	2	-19.7409
chr2	25312429	25313191	protein_coding	Clic3	exon	ENSMUSG00000015093	ProperStrand	79	chr8	108412401	108412525	protein_coding	Edc4	exon	ENSMUSG00000036270	ProperStrand	34	1	-13.9045
chr4	116862592	116862663	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	chr5	108336374	108336429	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-2.1017
chr3	152045773	152045863	protein_coding	Usp33	intron	ENSMUSG00000025437	ProperStrand	11	chr1	162965982	162966041	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-6.9371
chr5	124795635	124795715	protein_coding	Cdk2ap1	utr3	ENSMUSG00000029394	ProperStrand	22	chr3	34549611	34549701	protein_coding	Sox2	exon	ENSMUSG00000074637	ProperStrand	299	1	-12.1268
chr11	108783076	108783093	protein_coding	Axin2	utr5	ENSMUSG00000000142	NonProperStrand	81	chr13	58496010	58496070	protein_coding	Hnrnpk	exon	ENSMUSG00000021546	ProperStrand	117	1	-11.3688
chr3	107701516	107701580	protein_coding	Gstm5	utr3	ENSMUSG00000004032	ProperStrand	3	chr17	24857718	24857808	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-8.3442
chr2	152705936	152705952	protein_coding	Tpx2	exon	ENSMUSG00000027469	ProperStrand	111	chr18	35714164	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	3	-6.2774
chr14	77424372	77424388	protein_coding	9030625A04Rik	utr3	ENSMUSG00000044350	NonProperStrand	152	chr1	162965531	162965588	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.7055
chr6	69466504	69466548	misc_RNA	AC156953.1	.	ENSMUSG00000092746	ProperStrand	2	chr16	23111434	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-inf
chr11	53411513	53411811	protein_coding	Kif3a	exon	ENSMUSG00000018395	NonProperStrand	1	chr19	8963027	8963087	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-inf
chr7	151027204	151029046	protein_coding	Dhcr7	exon	ENSMUSG00000058454	ProperStrand	30	chr7	148634776	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-5.3210
chr11	106110883	106111036	protein_coding	Ftsj3	exon	ENSMUSG00000020706	ProperStrand	64	chr11	97642960	97643028	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.3622
chrX	140770883	140804399	protein_coding-noncoding	Alg13	utr3	ENSMUSG00000041718	ProperStrand	87	chr16	23110899	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-1.9105
chr13	42254868	42254956	protein_coding	Hivep1	exon	ENSMUSG00000021366	ProperStrand	24	chr2	145076804	145209251	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	3	-inf
chr6	7642265	7642306	protein_coding	Asns	intron	ENSMUSG00000029752	ProperStrand	59	chr16	23110936	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-0.8243
chr15	36535306	36535542	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr5	118477951	118477967	protein_coding	Tesc	exon	ENSMUSG00000029359	ProperStrand	114	1	-6.6077
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	116043858	116043875	protein_coding	Acox1	intron	ENSMUSG00000020777	NonProperStrand	3	1	-10.7414
chr17	56608581	56608680	protein_coding	Ptprs	intron	ENSMUSG00000013236	ProperStrand	152	chr13	34436854	34436870	protein_coding	Slc22a23	utr5	ENSMUSG00000038267	ProperStrand	95	1	-10.5244
chr11	3245199	3245268	protein_coding	Limk2	utr3	ENSMUSG00000020451	ProperStrand	100	chr10	39978356	39978407	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-4.4733
chr9	51893334	51893424	protein_coding	Rdx	exon	ENSMUSG00000032050	ProperStrand	60	chr11	69483162	69483242	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.4498
chr17	88918164	88918254	LINE	Lx5	L1	chr17Lx588918120	ProperStrand	1	chr17	88915094	88915174	SINE	B3	B2	chr17B388915011	NonProperStrand	1	1	-inf
chr3	103690208	103690225	protein_coding	Ptpn22	exon	ENSMUSG00000027843	ProperStrand	14	chr2	130101241	130101310	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-9.5317
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr1	165993210	165993226	protein_coding	Sell	exon	ENSMUSG00000026581	ProperStrand	12	1	-9.1521
chr16	23111481	23111506	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr2	31656109	31656182	protein_coding	Abl1	exon	ENSMUSG00000026842	ProperStrand	131	4	-19.3859
chr11	58762572	58762629	protein_coding	Hist3h2ba	exon	ENSMUSG00000056895	ProperStrand	10	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	2	-17.8093
chr3	85944540	85944606	snoRNA	ENSMUSG00000064390_Rnu73b	.	ENSMUSG00000064390	ProperStrand	164	chr16	23110454	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-1.9059
chr10	45932506	45932586	LINE	L1Md_F2	L1	chr10L1Md_F245931799	NonProperStrand	1	chr5	30387190	30387280	protein_coding	Tyms	utr3	ENSMUSG00000025747	ProperStrand	8	1	-inf
chr9	44218079	44218129	protein_coding	Rps25	exon	ENSMUSG00000009927	ProperStrand	42	chr11	101177582	101177631	protein_coding	Psme3	utr5	ENSMUSG00000078652	ProperStrand	17	5	-inf
chr17	57396234	57396251	protein_coding	Trip10	intron	ENSMUSG00000019487	NonProperStrand	4	chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	1	-14.5817
chr17	71714764	71719154	protein_coding	Smchd1	exon	ENSMUSG00000024054	ProperStrand	79	chr18	73693166	73693191	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-4.9892
chr4	134772103	134772193	protein_coding	Clic4	utr3	ENSMUSG00000037242	ProperStrand	84	chr11	69481346	69481426	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-2.6052
chr16	90386835	90386853	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	chr4	131865858	131865948	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.9938
chr8	109891815	109891836	protein_coding	Nfat5	exon	ENSMUSG00000003847	ProperStrand	29	chr11	69483137	69483237	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-9.3253
chr8	63796820	63796836	protein_coding	Sh3rf1	intron	ENSMUSG00000031642	ProperStrand	50	chr9	64023228	64023287	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	1	-8.8109
chr10	18320374	18320399	protein_coding	D10Bwg1379e	exon	ENSMUSG00000019852	ProperStrand	7	chr5	130300459	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-15.8659
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	84536995	84537012	protein_coding	Cyp26b1	intron	ENSMUSG00000063415	ProperStrand	27	2	-9.8247
chr4	141031046	141031161	protein_coding	Spen	exon	ENSMUSG00000040761	ProperStrand	161	chr9	15119733	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.1056
chr19	46153651	46153698	protein_coding	Nolc1	exon	ENSMUSG00000015176	ProperStrand	53	chr9	63066908	63066926	protein_coding	Map2k5	intron	ENSMUSG00000058444	NonProperStrand	79	1	-13.0125
chr9	70428653	70429152	protein_coding	Sltm	utr3	ENSMUSG00000032212	ProperStrand	13	chr4	131908264	131908354	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.0703
chr7	52309977	52309993	protein_coding	Prrg2	exon	ENSMUSG00000007837	NonProperStrand	281	chr14	33974944	33974965	protein_coding	Wdfy4	intron	ENSMUSG00000051506	NonProperStrand	11	1	-13.6853
chr11	62366087	62366406	protein_coding	Ubb	exon	ENSMUSG00000019505	ProperStrand	32	chr5	130300454	130300541	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-6.1950
chr8	125915492	125915556	protein_coding	Tcf25	exon	ENSMUSG00000001472	ProperStrand	66	chr3	144741286	144741303	protein_coding	Clca5	intron	ENSMUSG00000036960	NonProperStrand	8	1	-17.0621
chr11	51968635	51968754	lincRNA	Gm16953	intron	ENSMUSG00000087101	ProperStrand	20	chr3	152450610	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	6	-19.6266
chr5	100855947	100855974	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr10	122446676	122447554	protein_coding	Mon2	exon	ENSMUSG00000034602	ProperStrand	28	1	-8.1631
chr2	164650604	164650704	protein_coding	Zswim1	exon	ENSMUSG00000017764	ProperStrand	68	chr7	117190017	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.1057
chr11	72257563	72257580	protein_coding	Mybbp1a	exon	ENSMUSG00000040463	ProperStrand	279	chr5	151755614	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-4.7251
chr9	72328453	72328543	protein_coding	Tex9	utr5	ENSMUSG00000032219	ProperStrand	3	chr5	130300417	130300507	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-8.5956
chr4	43505802	43505902	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr11	62590591	62590630	snoRNA	ENSMUSG00000064692_SNORA67	.	ENSMUSG00000064692	ProperStrand	185	1	-1.2550
chr11	6319519	6319578	protein_coding	Ppia	exon	ENSMUSG00000071866	ProperStrand	127	chr7	116664842	116664876	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.3636
chr7	80586984	80587028	protein_coding	Chd2	intron	ENSMUSG00000078671	ProperStrand	69	chr1	88247755	88247834	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	2	-7.9811
chr15	74394256	74394279	miRNA	AC117657.1	.	ENSMUSG00000093340	ProperStrand	10	chr18	75160711	75160775	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	1	-12.8501
chr4	102243275	102243292	protein_coding	Pde4b	utr5	ENSMUSG00000028525	ProperStrand	35	chr18	35716835	35716883	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.1046
chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	chr15	10525645	10525748	protein_coding	Rai14	intron	ENSMUSG00000022246	ProperStrand	180	1	-8.2779
chr10	6063958	6063977	protein_coding	Akap12	intron	ENSMUSG00000038587	ProperStrand	1008	chr7	148634701	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	3	-0.7736
chr6	89283105	89283122	protein_coding	Plxna1	exon	ENSMUSG00000030084	NonProperStrand	19	chr4	116826700	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-9.0964
chr5	118458084	118458174	protein_coding	Fbxo21	exon	ENSMUSG00000032898	ProperStrand	34	chr7	149719067	149720957	protein_coding	Mrpl23	exon	ENSMUSG00000037772	ProperStrand	2	1	-20.4747
chr7	133746374	133746454	LTR	MER67A	ERV1	chr7MER67A133746333	ProperStrand	1	chr7	133746732	133746822	SINE	RSINE1	B4	chr7RSINE1133746688	NonProperStrand	1	1	-inf
chr7	28421172	28421284	protein_coding	Akt2	exon	ENSMUSG00000004056	ProperStrand	100	chr19	8963118	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-2.7675
chr2	76471660	76471676	protein_coding	Prkra	exon	ENSMUSG00000002731	NonProperStrand	65	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-7.5798
chr16	32243795	32243851	snoRNA	ENSMUSG00000080440_SNORA79	.	ENSMUSG00000080440	ProperStrand	140	chr18	35714156	35714256	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-3.5744
chr5	144935649	144935723	protein_coding	Lmtk2	exon	ENSMUSG00000038970	ProperStrand	60	chr2	26493398	26493488	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-6.3325
chr13	9833552	9833651	LINE	L1Md_T	L1	chr13L1Md_T9831266	NonProperStrand	15	chr16	57391628	57391706	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	1	-13.1260
chr5	54389948	54389965	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	chr11	97642952	97643005	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-1.4101
chr1	93342189	93345290	protein_coding	Per2	exon	ENSMUSG00000055866	ProperStrand	114	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-3.9734
chr1	88252834	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	chr8	73419654	73419776	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	38	-inf
chr14	56162861	56163292	protein_coding	Pck2	exon	ENSMUSG00000040618	ProperStrand	18	chr7	148634762	148634833	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-6.3384
chr12	88222476	88225350	protein_coding	6430527G18Rik	utr3	ENSMUSG00000034168	ProperStrand	46	chr3	123210892	123210982	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-4.4360
chr6	124791245	124791261	protein_coding	Leprel2	utr3	ENSMUSG00000023191	ProperStrand	44	chr4	86500849	86501799	protein_coding	Rps6	exon	ENSMUSG00000028495	ProperStrand	263	1	-10.9760
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr4	151389487	151389506	protein_coding	Klhl21	exon	ENSMUSG00000073700	ProperStrand	16	1	-11.5229
chr4	141673026	141673042	protein_coding	Kazn	exon	ENSMUSG00000040606	ProperStrand	123	chr10	90581107	90581175	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-3.4556
chr10	80809668	80809684	protein_coding	Hmg20b	exon	ENSMUSG00000020232	ProperStrand	157	chr17	13184994	13185013	protein_coding	Wtap	utr5	ENSMUSG00000060475	ProperStrand	119	1	-10.0084
chr1	158837835	158869687	protein_coding	Ralgps2	utr5	ENSMUSG00000026594	ProperStrand	16	chr7	95266597	95266613	protein_coding	Grm5	intron	ENSMUSG00000049583	NonProperStrand	145	1	-14.2303
chr14	30786584	30787666	protein_coding	Selk	exon	ENSMUSG00000042682	ProperStrand	16	chr11	69483136	69483191	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-11.8095
chr3	126927891	126927908	protein_coding	Ank2	intron	ENSMUSG00000032826	ProperStrand	30	chr17	35299571	35299642	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-6.1354
chr8	74002899	74003081	protein_coding	Ano8	exon	ENSMUSG00000034863	ProperStrand	7	chr8	129468799	129468879	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-8.7511
chrX	50622605	50622651	protein_coding	Fam122b	utr5	ENSMUSG00000036022	ProperStrand	20	chr9	64024484	64024567	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	3	-18.9823
chr17	32278435	32278480	protein_coding	Notch3	exon	ENSMUSG00000038146	ProperStrand	181	chr2	26493366	26493449	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-1.8288
chr11	56857656	56857674	protein_coding	Gria1	intron	ENSMUSG00000020524	NonProperStrand	9	chr4	131908265	131908355	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.8019
chr4	138846960	138847044	protein_coding	Capzb	utr3	ENSMUSG00000028745	ProperStrand	44	chr5	108334195	108334264	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-5.4229
chr7	16709120	16709220	protein_coding	Kptn	exon	ENSMUSG00000006021	ProperStrand	1	chr3	68889026	68889090	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-inf
chr1	24221409	24221425	protein_coding	Col9a1	exon	ENSMUSG00000026147	ProperStrand	18	chr4	132849828	132849872	protein_coding	Wdtc1	utr3	ENSMUSG00000037622	ProperStrand	81	1	-15.1470
chr7	17416827	17416843	protein_coding	Strn4	exon	ENSMUSG00000030374	NonProperStrand	11	chr16	23110828	23110872	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.6241
chr5	100407674	100407691	protein_coding	Hnrnpd	utr5	ENSMUSG00000000568	ProperStrand	33	chr19	8798479	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-6.3887
chr10	62054736	62056817	protein_coding	Ddx21	exon	ENSMUSG00000020075	ProperStrand	137	chr4	131908689	131908771	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-3.2599
chr8	97117524	97117543	protein_coding	Fam192a	intron	ENSMUSG00000031774	NonProperStrand	10	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-11.3948
chr2	135472433	135472452	LTR	RLTR17	ERVK	chr2RLTR17135472158	ProperStrand	3	chr11	119465228	119519005	protein_coding	Rptor	exon	ENSMUSG00000025583	ProperStrand	76	3	-inf
chr16	15966725	15966806	protein_coding	2310008H04Rik	exon	ENSMUSG00000041974	ProperStrand	30	chr18	75161402	75161681	protein_coding	Rpl17	exon	ENSMUSG00000062328	ProperStrand	90	1	-13.9031
chr1	38079149	38089153	protein_coding	Eif5b	exon	ENSMUSG00000026083	ProperStrand	118	chr8	34802321	34802416	snoRNA	ENSMUSG00000088856_SNORA48	.	ENSMUSG00000088856	ProperStrand	236	1	-9.2110
chr17	87396774	87396809	protein_coding	Rhoq	utr3	ENSMUSG00000024143	ProperStrand	3	chr7	29136633	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-8.4253
chr2	179322380	179628029	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr16	23110454	23110527	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-1.8192
chr2	84530865	84531297	protein_coding	Zdhhc5	exon	ENSMUSG00000034075	NonProperStrand	144	chr16	44107987	44109714	protein_coding	Atp6v1a	exon	ENSMUSG00000052459	ProperStrand	79	1	-11.0029
chr7	118224456	118224472	protein_coding	Eif4g2	exon	ENSMUSG00000005610	ProperStrand	134	chr16	3856858	3856879	protein_coding	Zfp174	utr3	ENSMUSG00000054939	NonProperStrand	166	1	-9.6593
chr2	90235304	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	56266647	56266665	protein_coding	Hmg20a	utr5	ENSMUSG00000032329	ProperStrand	87	2	-6.3547
chr6	72726720	72726736	protein_coding	Tcf7l1	intron	ENSMUSG00000055799	NonProperStrand	8	chr6	115758011	115758049	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-9.5636
chr5	135016842	135016858	protein_coding	Clip2	intron	ENSMUSG00000063146	ProperStrand	35	chr2	139504270	139504288	protein_coding	Ism1	utr5	ENSMUSG00000074766	ProperStrand	8	1	-17.9876
chr7	117166722	117166850	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	chr11	62416959	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	5	-0.8878
chr15	101025381	101025446	protein_coding	Acvr1b	exon	ENSMUSG00000000532	ProperStrand	259	chr1	40548304	40548320	protein_coding	Il18r1	utr3	ENSMUSG00000026070	NonProperStrand	4	1	-16.0880
chr14	32514951	32515041	protein_coding	Ankrd28	utr3	ENSMUSG00000014496	ProperStrand	39	chr10	110918591	110918633	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-4.2557
chr14	33005094	33005238	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	NonProperStrand	13	chr3	123210891	123210911	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	NonProperStrand	45	1	-16.9696
chr12	70474301	70474369	protein_coding	Arf6	utr3	ENSMUSG00000044147	ProperStrand	32	chr3	68889066	68889140	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-4.4346
chr13	6566697	6567929	protein_coding	Pitrm1	exon	ENSMUSG00000021193	ProperStrand	28	chr16	23110546	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-6.5063
chr1	94600715	94600731	LINE	L1MB8	L1	chr1L1MB894600394	ProperStrand	25	chr4	116827793	116827825	snoRNA	ENSMUSG00000064751_SNORD46	.	ENSMUSG00000064751	ProperStrand	132	1	-13.5003
chr11	97642952	97643010	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	NonProperStrand	10	chr2	26494775	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	NonProperStrand	27	1	-18.6076
chr1	183834740	183834785	protein_coding	Enah	utr3	ENSMUSG00000022995	ProperStrand	196	chr11	69481332	69481433	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-1.2755
chr5	116039004	116039020	protein_coding	Gcn1l1	exon	ENSMUSG00000041638	ProperStrand	408	chr3	38790074	38790090	protein_coding	Fat4	exon	ENSMUSG00000046743	NonProperStrand	13	1	-12.5887
chr3	102101307	102101329	LINE	Lx4B	L1	chr3Lx4B102101152	ProperStrand	1	chr11	69483136	69483268	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-inf
chr16	13832131	13832177	protein_coding	Ntan1	intron	ENSMUSG00000022681	ProperStrand	2	chr7	29136554	29136598	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-9.5181
chr1	162966189	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	chr2	26768369	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	4	-3.8062
chr7	52309977	52309993	protein_coding	Prrg2	exon	ENSMUSG00000007837	NonProperStrand	281	chr4	126115111	126115143	protein_coding	Eif2c1	utr3	ENSMUSG00000041530	ProperStrand	30	1	-11.6197
chr9	113580892	113580992	protein_coding	Pdcd6ip	exon	ENSMUSG00000032504	ProperStrand	53	chr9	63868722	63868738	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	1	-8.8356
chr11	62416635	62416657	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	5	-2.7388
chr5	148113281	148113297	protein_coding	Cdx2	utr3	ENSMUSG00000029646	ProperStrand	276	chr13	23623037	23623137	protein_coding	Hist1h4h	exon	ENSMUSG00000060981	ProperStrand	30	1	-11.6555
chr12	106011419	106011436	protein_coding	Clmn	utr3	ENSMUSG00000021097	ProperStrand	50	chr11	97642952	97643073	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.7879
chrX	100741246	100741316	LINE	L1Md_F2	L1	chrXL1Md_F2100741217	NonProperStrand	4	chr3	123210854	123210886	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-18.3087
chr9	15121038	15121088	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	1	-6.2529
chr13	96106310	96106373	protein_coding	Zbed3	exon	ENSMUSG00000041995	ProperStrand	33	chr12	17552949	17553031	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-6.2642
chr14	56159294	56159312	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	chr12	17552949	17553031	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	2	-4.9910
chr10	39547577	39547608	protein_coding	Rev3l	exon	ENSMUSG00000019841	ProperStrand	39	chr9	95889330	95889418	protein_coding	Xrn1	exon	ENSMUSG00000032410	ProperStrand	12	1	-17.3420
chr3	121160744	121160843	protein_coding	Cnn3	utr3	ENSMUSG00000053931	ProperStrand	77	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-2.3352
chr7	133520549	133520566	protein_coding	Spns1	exon	ENSMUSG00000030741	NonProperStrand	16	chr18	42290106	42290124	protein_coding	Sh3rf2	intron	ENSMUSG00000057719	ProperStrand	3	1	-inf
chr5	100855902	100855944	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	NonProperStrand	3	chr16	57391599	57391699	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	1	-16.7106
chr2	24205199	24205215	protein_coding	Il1rn	utr3	ENSMUSG00000026981	ProperStrand	45	chr4	122970405	122970449	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-7.9899
chr8	3532027	3532086	protein_coding	Pnpla6	exon	ENSMUSG00000004565	ProperStrand	60	chr4	131865856	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	5	-9.1849
chr1	62686775	62686791	protein_coding	Pard3b	utr3	ENSMUSG00000046526	ProperStrand	31	chr2	26494779	26494826	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.3375
chr15	91690105	91690126	protein_coding	Smgc	exon	ENSMUSG00000047295	NonProperStrand	1	chr15	82980124	82980224	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-inf
chr5	20457259	20457349	protein_coding	Rsbn1l	exon	ENSMUSG00000039968	ProperStrand	17	chr1	89681213	89681293	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-7.9609
chr16	58466187	58466267	protein_coding	Dcbld2	utr3	ENSMUSG00000035107	NonProperStrand	8	chr5	130300457	130300547	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	NonProperStrand	11	1	-18.8752
chr5	74489542	74489590	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr5	73488644	73488734	protein_coding	Fryl	exon	ENSMUSG00000070733	ProperStrand	173	3	-8.8869
chr2	152163523	152163539	protein_coding	Trib3	utr3	ENSMUSG00000032715	NonProperStrand	46	chr14	76247754	76247778	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-4.6797
chr16	23111777	23111840	protein_coding	Eif4a2	intron	ENSMUSG00000022884	ProperStrand	356	chr8	98269970	98270070	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-2.2607
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr2	158182156	158182288	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-1.1245
chr6	39348428	39349348	protein_coding	Mkrn1	exon	ENSMUSG00000029922	ProperStrand	177	chr8	129468786	129468876	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	19	-inf
chr10	82113849	82113868	protein_coding	Glt8d2	utr3	ENSMUSG00000020251	NonProperStrand	24	chr1	89681253	89681353	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-7.2607
chr2	84886919	84886968	protein_coding	Ssrp1	utr3	ENSMUSG00000027067	ProperStrand	118	chr7	29136525	29136572	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-2.5051
chr10	127558656	127558880	protein_coding	Baz2a	exon	ENSMUSG00000040054	NonProperStrand	9	chr19	8800393	8800473	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	NonProperStrand	18	2	-19.0308
chr12	88607739	88607789	protein_coding	Ahsa1	utr5	ENSMUSG00000021037	ProperStrand	58	chr16	16891569	16891586	protein_coding	Top3b	exon	ENSMUSG00000022779	NonProperStrand	5	2	-19.9655
chr7	16677708	16678201	protein_coding	Zfp541	exon	ENSMUSG00000078796	ProperStrand	33	chr11	77995189	77995238	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	2	-11.8492
chr5	67389993	67390010	protein_coding	Limch1	exon	ENSMUSG00000037736	ProperStrand	20	chr1	24821716	24821823	protein_coding	Lmbrd1	utr3	ENSMUSG00000073725	ProperStrand	7	1	-20.0012
chr1	52271353	52271383	protein_coding	Gls	exon	ENSMUSG00000026103	ProperStrand	56	chr3	123210908	123210978	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-3.9092
chr5	64203925	64203942	protein_coding	0610040J01Rik	intron	ENSMUSG00000060512	ProperStrand	36	chr9	64022855	64022878	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-9.0515
chr1	162968213	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	chr6	124665373	124665473	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	1	-1.1165
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr2	32818804	32818946	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	4	-3.8633
chr8	86249222	86249784	protein_coding	Cd97	exon	ENSMUSG00000002885	ProperStrand	37	chr7	112895514	112895530	protein_coding	Tpp1	exon	ENSMUSG00000030894	NonProperStrand	25	1	-16.0265
chr12	21400918	21402177	protein_coding	Ywhaq	exon	ENSMUSG00000076432	ProperStrand	70	chr10	110918616	110918693	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-5.4463
chr2	153502950	153502990	protein_coding	Dnmt3b	exon	ENSMUSG00000027478	ProperStrand	19	chr1	162968213	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-9.1319
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr2	29917725	29923804	protein_coding	Set	exon	ENSMUSG00000054766	ProperStrand	167	1	-6.8881
chr14	64114910	64115815	protein_coding	Tdh	exon	ENSMUSG00000021953	ProperStrand	67	chr7	116664848	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.3609
chr5	74489204	74489324	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr9	64024466	64024567	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	2	-2.4185
chr7	11074898	11074953	protein_coding	Zik1	utr3	ENSMUSG00000030393	ProperStrand	11	chr19	8798507	8798557	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	3	-19.2450
chr10	126955372	126955446	protein_coding	Shmt2	exon	ENSMUSG00000025403	ProperStrand	94	chr6	86341769	86341795	protein_coding	Pcyox1	exon	ENSMUSG00000029998	ProperStrand	17	1	-14.9701
chr5	136254600	136259175	protein_coding	Mdh2	utr5	ENSMUSG00000019179	ProperStrand	50	chr4	46463877	46463893	protein_coding	Anp32b	utr5	ENSMUSG00000028333	NonProperStrand	2	1	-inf
chr18	34807094	34807129	rRNA	n-R5s25	.	ENSMUSG00000064857	ProperStrand	1	chr16	23110829	23110874	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr6	65610186	65610204	LTR	LTR50	ERVL	chr6LTR5065609957	NonProperStrand	1	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-inf
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr2	70401918	70401934	protein_coding	Gad1	exon	ENSMUSG00000070880	NonProperStrand	15	1	-11.7433
chr9	72566122	72569118	protein_coding	Nedd4	exon	ENSMUSG00000032216	ProperStrand	308	chr15	98350146	98350236	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-1.8420
chr2	153228663	153228705	protein_coding	Asxl1	utr3	ENSMUSG00000042548	ProperStrand	76	chr11	116938557	116938647	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-5.6947
chr5	66921730	66921830	protein_coding	Apbb2	intron	ENSMUSG00000029207	ProperStrand	25	chr4	131908687	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.6029
chr7	3159442	3161234	protein_coding	AU018091	exon	ENSMUSG00000054753	ProperStrand	42	chr13	46765144	46765160	protein_coding	C78339	exon	ENSMUSG00000069237	NonProperStrand	104	1	-12.9299
chr5	125203694	125203757	protein_coding	Atp6v0a2	utr3	ENSMUSG00000038023	ProperStrand	31	chr9	120037977	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-5.9972
chr5	139712277	139712302	protein_coding	Sun1	intron	ENSMUSG00000036817	ProperStrand	108	chr15	5068446	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-4.9211
chr15	90059004	90059040	protein_coding	Alg10b	utr3	ENSMUSG00000075470	ProperStrand	15	chr11	6428088	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	6	-inf
chr12	112781422	112781781	protein_coding	Eif5	exon	ENSMUSG00000021282	ProperStrand	125	chr18	35716835	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.0798
chr8	31436465	31436482	LINE	Lx7	L1	chr8Lx731436390	ProperStrand	23	chr8	74116290	74116347	protein_coding	Pgls	exon	ENSMUSG00000031807	ProperStrand	8	1	-18.6862
chr11	12153248	12153292	protein_coding	Cobl	exon	ENSMUSG00000020173	ProperStrand	133	chr7	29136556	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.1523
chr19	9042728	9047059	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	chr18	73693111	73693140	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	5	-9.8845
chr11	102294587	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr7	117483486	117483563	protein_coding	Sbf2	exon	ENSMUSG00000038371	ProperStrand	17	1	-11.4520
chr14	58287076	58287117	protein_coding	Lats2	intron	ENSMUSG00000021959	NonProperStrand	14	chr16	23111398	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-6.3756
chr12	18152761	18152828	LINE	Lx4B	L1	chr12Lx4B18152706	NonProperStrand	3	chr7	29136526	29136570	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-inf
chr16	3856858	3856878	protein_coding	Zfp174	utr3	ENSMUSG00000054939	NonProperStrand	166	chr2	72314321	72317005	protein_coding	Cdca7	utr5	ENSMUSG00000055612	ProperStrand	22	1	-13.3064
chr9	96586580	96586673	protein_coding	Zbtb38	exon	ENSMUSG00000040433	ProperStrand	9	chr15	78127411	78127427	protein_coding	Csf2rb2	exon	ENSMUSG00000071714	NonProperStrand	14	1	-inf
chr2	25105896	25107254	protein_coding	Ndor1	exon	ENSMUSG00000006471	NonProperStrand	84	chr11	106362556	106362575	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-6.7361
chr18	65796043	65796143	protein_coding	Zfp532	intron	ENSMUSG00000042439	ProperStrand	24	chr4	131908809	131908882	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.6746
chr7	54178747	54178815	LINE	L1Md_F2	L1	chr7L1Md_F254178706	NonProperStrand	1	chr3	123210854	123210886	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-inf
chr16	75986952	75986970	protein_coding	Samsn1	intron	ENSMUSG00000022876	NonProperStrand	4	chr3	68889167	68889266	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	3	-19.1276
chr16	23111464	23111509	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr15	79746477	79746577	protein_coding	Cbx7	utr3	ENSMUSG00000053411	ProperStrand	62	2	-14.1962
chr8	96560703	96560793	protein_coding	Nudt21	utr5	ENSMUSG00000031754	ProperStrand	33	chr4	131908809	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.1302
chr16	8690747	8690820	protein_coding	Usp7	utr3	ENSMUSG00000022710	ProperStrand	118	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-5.5926
chr2	90235307	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chrX	40944841	40944857	protein_coding	Gm362	exon	ENSMUSG00000078320	ProperStrand	129	1	-3.0438
chr2	70804440	70804456	protein_coding	Mettl8	utr3	ENSMUSG00000041975	NonProperStrand	6	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-12.4916
chr9	63868722	63868739	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	chr1	9932576	9932626	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-3.1799
chr13	21284095	21284151	protein_coding	Trim27	exon	ENSMUSG00000021326	ProperStrand	28	chr4	131908813	131908896	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.4067
chr9	120037665	120037715	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	chr5	74489587	74489677	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-0.7850
chrX	20227598	20227733	protein_coding	Rbm10	exon	ENSMUSG00000031060	ProperStrand	31	chr9	15119736	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-6.4865
chr17	32453268	32453285	protein_coding	Akap8	exon	ENSMUSG00000024045	ProperStrand	339	chr2	130101985	130102085	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-2.1842
chr5	3344168	3344258	protein_coding	Cdk6	utr5	ENSMUSG00000040274	ProperStrand	5	chr7	116663652	116663732	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-7.4047
chr18	40416854	40416871	protein_coding	2900055J20Rik	exon	ENSMUSG00000071860	ProperStrand	5	chr19	8963026	8963115	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-7.1260
chr4	97472863	97472880	protein_coding	Nfia	intron	ENSMUSG00000028565	NonProperStrand	74	chr7	29136525	29136599	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.0186
chr5	113369935	113369954	protein_coding	Adrbk2	intron	ENSMUSG00000042249	NonProperStrand	4	chr19	8963045	8963145	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-7.6308
chr12	21271833	21273640	protein_coding	Asap2	exon	ENSMUSG00000052632	ProperStrand	45	chr1	162965536	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.8074
chr4	129662259	129662276	protein_coding	Bai2	utr5	ENSMUSG00000028782	ProperStrand	119	chr11	5344505	5344521	protein_coding	Znrf3	exon	ENSMUSG00000041961	ProperStrand	63	1	-11.8404
chr17	57160869	57160959	protein_coding	Khsrp	utr3	ENSMUSG00000007670	ProperStrand	353	chr12	60141352	60141432	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-3.4239
chr8	18882859	18882877	protein_coding	Agpat5	utr3	ENSMUSG00000031467	NonProperStrand	16	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.8202
chr8	14328347	14328365	protein_coding	Dlgap2	intron	ENSMUSG00000047495	NonProperStrand	23	chr14	76247744	76247834	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-6.0408
chr13	24563276	24563328	protein_coding	Cmah	utr3	ENSMUSG00000016756	NonProperStrand	53	chr6	71832551	71832577	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-5.8545
chr14	57108186	57108232	protein_coding	Rnf17	intron	ENSMUSG00000000365	ProperStrand	16	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-9.6527
chr2	164328072	164328172	protein_coding	Pigt	exon	ENSMUSG00000017721	ProperStrand	45	chr7	51505228	51505255	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	1	-8.7284
chr10	110943845	110943881	protein_coding	Phlda1	utr5	ENSMUSG00000020205	ProperStrand	1	chr13	14722546	14728594	protein_coding	AW209491	utr5	ENSMUSG00000039182	ProperStrand	4	1	-inf
chr14	66342756	66342772	protein_coding	Scara5	intron	ENSMUSG00000022032	ProperStrand	30	chr16	23111439	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.3326
chr8	72441866	72441956	protein_coding	Gatad2a	exon	ENSMUSG00000036180	ProperStrand	112	chr4	122968589	122968669	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-5.0608
chr7	20526640	20526657	protein_coding	2210010C17Rik	intron	ENSMUSG00000040498	NonProperStrand	18	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-8.2799
chr2	119120130	119120146	protein_coding	Vps18	exon	ENSMUSG00000034216	NonProperStrand	40	chr8	98269959	98269999	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-6.3406
chrX	98839657	98839727	protein_coding	Ogt	intron	ENSMUSG00000034160	ProperStrand	49	chr2	130101972	130102062	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-5.7531
chr15	76736551	76736570	protein_coding	Rpl8	exon	ENSMUSG00000003970	ProperStrand	191	chr19	8907119	8907217	protein_coding	Hnrnpul2	utr3	ENSMUSG00000071659	ProperStrand	93	3	-19.2787
chr6	125112363	125112536	protein_coding	Gapdh	exon	ENSMUSG00000057666	ProperStrand	356	chr4	41158541	41158582	snoRNA	ENSMUSG00000089308_SNORD121A	.	ENSMUSG00000089308	ProperStrand	209	5	-20.7661
chr12	17552949	17553082	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr1	88252836	88252901	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	8	-4.9889
mmu-miR-3968	3	21	miRNA	mmu-miR-3968	.	mmu-miR-3968	ProperStrand	27	chr4	116826716	116826766	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-8.3816
chr19	11861067	11861084	protein_coding	Stx3	exon	ENSMUSG00000041488	NonProperStrand	5	chr9	15119650	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-12.4515
chr11	83107805	83107823	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	NonProperStrand	2	chr18	33954815	33954938	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	NonProperStrand	24	2	-inf
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr14	28280737	28280822	protein_coding	D14Abb1e	intron	ENSMUSG00000040651	ProperStrand	49	1	-9.1225
chr2	179773505	179773524	protein_coding	Psma7	exon	ENSMUSG00000027566	NonProperStrand	4	chr4	131908809	131908851	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-10.6778
chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	chr2	26768049	26768102	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	1	-3.3954
chr18	75161565	75161596	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	chr11	83107805	83107901	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	1	-2.9295
chr14	26280321	26280346	lincRNA	D930049A15Rik	exon	ENSMUSG00000087535	ProperStrand	13	chr2	26494708	26494831	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-6.0562
chr17	39979944	39980005	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr16	72800514	72800532	protein_coding	Robo1	intron	ENSMUSG00000022883	NonProperStrand	188	1	-4.9826
chr14	55268620	55268720	protein_coding-noncoding	Acin1	utr3	ENSMUSG00000022185	ProperStrand	15	chr4	131866629	131866675	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	7	-inf
chr4	102832312	102832412	protein_coding	Mier1	exon	ENSMUSG00000028522	ProperStrand	7	chr16	23110968	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.4785
chr16	91616805	91616821	protein_coding	Dnajc28	exon	ENSMUSG00000039763	ProperStrand	9	chr2	29852345	29852420	protein_coding	Spna2	exon	ENSMUSG00000057738	ProperStrand	222	2	-18.8373
chr1	152268927	152271923	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	chr3	68889096	68889216	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	6	-3.7446
chr8	26879777	26879793	protein_coding	Gm17484	utr3	ENSMUSG00000091514	ProperStrand	68	chr4	131865855	131865934	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.5775
chr1	88252761	88253136	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chr9	15118552	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	1	-3.5262
chr19	9043899	9043919	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	chr3	96132421	96132514	snRNA	ENSMUSG00000075978_U1	.	ENSMUSG00000075978	ProperStrand	132	3	-17.5697
chr5	31916532	31916550	protein_coding-noncoding	Mrpl33	utr5	ENSMUSG00000029142	ProperStrand	4	chr2	26768382	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-11.2331
chr1	123303998	123304088	SINE	B4	B4	chr1B4123303800	NonProperStrand	1	chr7	147052339	147052429	protein_coding	Gpr123	intron	ENSMUSG00000025475	ProperStrand	3	1	-inf
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr15	34370545	34370665	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	4	-0.8546
chr6	77195102	77195118	protein_coding	Lrrtm1	exon	ENSMUSG00000060780	ProperStrand	19	chr9	120038552	120038665	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.2199
chr11	48616968	48617380	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	chr9	96101616	96101645	protein_coding	Tfdp2	intron	ENSMUSG00000032411	ProperStrand	95	3	-19.3468
chr4	24555745	24555762	protein_coding	Klhl32	intron	ENSMUSG00000040387	ProperStrand	67	chr11	6428088	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.9940
chr11	68627895	68627911	protein_coding	Myh10	exon	ENSMUSG00000020900	ProperStrand	91	chr11	69481335	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-2.4680
chr6	39370141	39370241	protein_coding	Mkrn1	exon	ENSMUSG00000029922	ProperStrand	177	chr7	29136607	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-0.8012
chr14	96988079	96988179	snoRNA	ENSMUSG00000064581_SNORA30	.	ENSMUSG00000064581	ProperStrand	146	chr7	67123693	67123712	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	1	-7.7618
chr19	11015616	11015632	protein_coding	Gpr44	exon	ENSMUSG00000034117	NonProperStrand	118	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-3.9199
chr2	130101968	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	chr9	64023294	64023329	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	2	-2.2033
chr8	94149045	94149064	antisense	Gm3235	.	ENSMUSG00000090778	ProperStrand	11	chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-9.8943
chr10	39217942	39217959	protein_coding	Fyn	intron	ENSMUSG00000019843	NonProperStrand	17	chr4	131908387	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.5556
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr1	108496590	108496607	protein_coding	Bcl2	intron	ENSMUSG00000057329	NonProperStrand	9	1	-16.9677
chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr5	135857995	135858011	protein_coding	Pom121	exon	ENSMUSG00000053293	NonProperStrand	94	1	-5.5718
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	43579408	43579425	protein_coding	Got1	intron	ENSMUSG00000025190	NonProperStrand	147	1	-2.8129
chr14	70196663	70196681	protein_coding	Rhobtb2	exon	ENSMUSG00000022075	ProperStrand	22	chr16	23110919	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-4.4664
chr5	116055989	116056008	protein_coding	Gcn1l1	intron	ENSMUSG00000041638	NonProperStrand	3	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-14.1023
chr14	20638809	20638899	protein_coding	2700060E02Rik	intron	ENSMUSG00000021807	ProperStrand	43	chr16	23111741	23111821	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.4531
chr2	22444176	22444943	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	chr10	23505151	23505282	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	24	-3.1641
chr5	136707644	136707662	protein_coding	Sh2b2	exon	ENSMUSG00000005057	NonProperStrand	101	chr8	73419657	73419729	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.2275
chr2	26493366	26493431	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr2	144091716	144091816	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	ProperStrand	549	2	-0.9985
chr2	31658537	31658657	protein_coding	Abl1	utr3	ENSMUSG00000026842	ProperStrand	131	chr6	28211452	28211474	protein_coding	Zfp800	utr5	ENSMUSG00000039841	ProperStrand	7	1	-16.1693
chr5	130112883	130112971	protein_coding	Mmp17	utr3	ENSMUSG00000029436	ProperStrand	17	chr1	89673627	89673717	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-5.6845
chrX	92909166	92909267	protein_coding	Zc3h12b	intron	ENSMUSG00000035045	ProperStrand	4	chr2	26493473	26493494	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-9.2834
chr1	91518870	91518970	protein_coding	Agap1	intron	ENSMUSG00000055013	ProperStrand	229	chr5	108336433	108336490	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-2.4267
chrX	10294537	10294556	protein_coding	Mid1ip1	utr5	ENSMUSG00000008035	NonProperStrand	4	chr15	34370652	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-9.0741
chr5	115983444	115983460	protein_coding	Pxn	intron	ENSMUSG00000029528	ProperStrand	171	chr7	52382237	52382314	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-6.2059
chr2	26493484	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr2	119624765	119627284	protein_coding	Tyro3	exon	ENSMUSG00000027298	ProperStrand	35	1	-7.2666
chr1	55137152	55137972	protein_coding	Hspd1	exon	ENSMUSG00000025980	ProperStrand	140	chr2	26768394	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	7	-19.2624
chr14	73785015	73785083	protein_coding	Itm2b	utr5	ENSMUSG00000022108	ProperStrand	25	chr2	173051005	173051021	protein_coding	Pmepa1	utr3	ENSMUSG00000038400	NonProperStrand	13	1	-17.9973
chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr1	63225658	63225710	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-1.6715
chr3	67161283	67161299	protein_coding	Rsrc1	utr3	ENSMUSG00000034544	NonProperStrand	71	chr11	77996564	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-5.7611
chr12	86642749	86642838	protein_coding	Nek9	utr3	ENSMUSG00000034290	ProperStrand	50	chr9	120038607	120038672	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-5.7644
chr14	22489338	22489428	protein_coding	Myst4	exon	ENSMUSG00000021767	ProperStrand	151	chr7	30231512	30231592	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	1	-7.0080
chr4	131908216	131908299	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr13	8756716	8766308	protein_coding	Adarb2	utr3	ENSMUSG00000052551	ProperStrand	292	1	-4.1789
mmu-miR-150-5p	4	22	miRNA	mmu-miR-150-5p	.	mmu-miR-150-5p	ProperStrand	2	chr7	117189863	117189944	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-13.6430
chr3	156224612	156224628	lincRNA	4930570G19Rik	exon	ENSMUSG00000085084	ProperStrand	326	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-5.5763
chr8	127420002	127420087	protein_coding	Exoc8	exon	ENSMUSG00000074030	ProperStrand	4	chrX	34622919	34623010	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-8.6589
chr6	83111671	83111687	protein_coding	1700003E16Rik	exon	ENSMUSG00000030030	ProperStrand	352	chr5	112865460	112865476	protein_coding	Sez6l	exon	ENSMUSG00000058153	ProperStrand	81	1	-9.1666
chr9	13641294	13641347	protein_coding	Fam76b	exon	ENSMUSG00000037808	ProperStrand	23	chr19	8800358	8800448	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-8.8458
chr5	37667536	37667552	protein_coding	Crmp1	exon	ENSMUSG00000029121	ProperStrand	85	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-5.9044
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	141090405	141090422	protein_coding	Lfng	exon	ENSMUSG00000029570	NonProperStrand	92	1	-3.6583
chr7	29940496	29940576	protein_coding-noncoding	Fam98c	utr3	ENSMUSG00000030590	ProperStrand	1	chr7	29940158	29940248	protein_coding	Fam98c	utr5	ENSMUSG00000030590	ProperStrand	9	1	-inf
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr15	98604924	98606960	protein_coding	Wnt10b	exon	ENSMUSG00000022996	NonProperStrand	189	1	-10.8507
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	128010926	128010944	protein_coding	Tspan9	intron	ENSMUSG00000030352	ProperStrand	67	1	-4.2526
chr11	50125128	50125145	protein_coding	Canx	exon	ENSMUSG00000020368	ProperStrand	296	chr8	77742558	77742574	protein_coding	Rasd2	exon	ENSMUSG00000034472	NonProperStrand	237	1	-7.3724
chr4	46513044	46513626	protein_coding	Nans	exon	ENSMUSG00000028334	ProperStrand	18	chr8	73419689	73419769	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-8.9548
chr17	29175455	29175512	protein_coding	Srsf3	exon	ENSMUSG00000071172	ProperStrand	23	chr17	13112498	13112528	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	2	-10.5007
chr17	45705839	45706046	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr14	31827476	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	2	-2.0843
chr1	193730797	193730813	protein_coding	Slc30a1	utr5	ENSMUSG00000037434	ProperStrand	42	chr11	55296273	55296332	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-6.8874
chrX	135868782	135868882	protein_coding	Trap1a	exon	ENSMUSG00000051257	ProperStrand	66	chr11	69483136	69483190	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.2889
chr6	54379743	54379760	lincRNA	9130019P16Rik	exon	ENSMUSG00000073067	ProperStrand	255	chr6	115758044	115758119	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-2.7675
chr1	192769875	192769894	protein_coding	Angel2	utr3	ENSMUSG00000026634	NonProperStrand	2	chr9	15119646	15119692	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-9.8289
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr7	13614903	13615111	protein_coding	Trim28	exon	ENSMUSG00000005566	ProperStrand	296	2	-5.6639
chr3	88715213	88715230	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr2	156901771	156901787	protein_coding	9830001H06Rik	intron	ENSMUSG00000055485	ProperStrand	26	1	-8.9144
chr17	59135251	59135267	LTR	ORR1A2	MaLR	chr17ORR1A259135069	NonProperStrand	12	chr2	26494708	26494799	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-10.2021
chr1	89377777	89377794	protein_coding	Ngef	exon	ENSMUSG00000026259	NonProperStrand	41	chr3	123210907	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.7108
chr11	6025495	6025511	protein_coding	Nudcd3	exon	ENSMUSG00000053838	NonProperStrand	4	chr16	23110918	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-8.2228
chr12	110168093	110168111	protein_coding	Wdr25	intron	ENSMUSG00000040877	ProperStrand	14	chrX	99445995	99446012	protein_coding	Cited1	utr5	ENSMUSG00000051159	ProperStrand	72	1	-15.9229
chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	chr2	157045800	157045817	protein_coding	4922505G16Rik	exon	ENSMUSG00000074627	ProperStrand	12	1	-10.2487
chr16	20684341	20684387	snoRNA	ENSMUSG00000077239_Snord66	.	ENSMUSG00000077239	ProperStrand	159	chr7	116664809	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	6	-8.2676
chr3	101395353	101395749	protein_coding	Atp1a1	exon	ENSMUSG00000033161	ProperStrand	316	chr11	68716777	68717893	protein_coding	Rpl26	exon	ENSMUSG00000060938	ProperStrand	130	5	-inf
chr7	134734169	134734186	protein_coding	Rnf40	exon	ENSMUSG00000030816	NonProperStrand	3	chr7	117189880	117189896	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-9.5269
chr7	19842995	19843022	protein_coding	Vasp	utr3	ENSMUSG00000030403	ProperStrand	28	chr2	25078500	25078562	protein_coding	Tubb4b	exon	ENSMUSG00000036752	ProperStrand	58	3	-19.7093
chr7	133939003	133939139	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	chr10	127521228	127521269	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	1	-3.9342
chr11	106237783	106237951	protein_coding	2310007L24Rik	exon	ENSMUSG00000009210	ProperStrand	2	chr16	23111451	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-8.0851
chr1	137244975	137244993	protein_coding	Lmod1	intron	ENSMUSG00000048096	ProperStrand	2	chr1	162965549	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-10.5602
chr17	71200512	71200541	protein_coding	Tgif1	utr5	ENSMUSG00000047407	ProperStrand	64	chr18	35716726	35716816	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.0639
chr7	152118581	152118597	protein_coding	Ccnd1	exon	ENSMUSG00000070348	ProperStrand	93	chr9	120038492	120038549	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.2799
chr1	175569292	175569372	protein_coding	Pyhin1	intron	ENSMUSG00000043263	ProperStrand	1	chr1	175457625	175457715	protein_coding	BC094916	intron	ENSMUSG00000070501	ProperStrand	1	1	-inf
chr6	31053112	31053129	lincRNA	Gm13833	exon	ENSMUSG00000087312	ProperStrand	1	chr11	98878341	98878371	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-inf
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr8	129468749	129468800	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-0.7805
chr5	136868255	136883857	protein_coding	Cux1	exon	ENSMUSG00000029705	ProperStrand	19	chr5	137542703	137542767	protein_coding	Serpine1	exon	ENSMUSG00000037411	ProperStrand	2	1	-inf
chrX	100548403	100548493	LINE	L1MB5	L1	chrXL1MB5100548305	ProperStrand	1	chrX	100548227	100548317	SINE	B3A	B2	chrXB3A100548118	NonProperStrand	1	1	-inf
chr10	24275257	24275275	lincRNA	Gm15270	intron	ENSMUSG00000087400	ProperStrand	1	chr19	8963039	8963129	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-inf
chr8	122157077	122157094	protein_coding	Kcng4	exon	ENSMUSG00000045246	ProperStrand	14	chr11	62416578	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-8.0774
chr6	134097815	134097831	protein_coding	Etv6	intron	ENSMUSG00000030199	NonProperStrand	77	chr9	120039533	120039640	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.8709
chr2	121949511	121949527	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	chr15	98350146	98350283	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	2	-3.6874
chr11	120673480	120673652	protein_coding	Fasn	exon	ENSMUSG00000025153	ProperStrand	298	chr5	74489567	74489647	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-1.1372
chr2	4830838	4830909	protein_coding	Sephs1	utr3	ENSMUSG00000026662	ProperStrand	20	chr4	131908312	131908402	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.2521
chr12	48382351	48382451	LINE	L1Md_T	L1	chr12L1Md_T48381020	ProperStrand	1	chr16	23111778	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-inf
chr10	114580039	114580056	protein_coding	Tph2	intron	ENSMUSG00000006764	ProperStrand	8	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.4974
chr1	34352112	34352355	protein_coding	Dst	exon	ENSMUSG00000026131	ProperStrand	461	chr16	18240854	18240934	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	1	-5.0987
chrX	71533839	71534003	protein_coding	Taz	exon	ENSMUSG00000009995	ProperStrand	59	chr8	73419656	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-8.0102
chr4	131908356	131908460	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr13	58400751	58400770	protein_coding	Kif27	intron	ENSMUSG00000060176	ProperStrand	75	1	-6.8161
chr7	53464413	53464431	protein_coding	Ush1c	exon	ENSMUSG00000030838	NonProperStrand	62	chr9	70218296	70224387	protein_coding	Myo1e	exon	ENSMUSG00000032220	ProperStrand	36	3	-inf
chr7	28960987	28962183	protein_coding	Fbl	exon	ENSMUSG00000046865	ProperStrand	52	chr5	74489622	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-4.0465
chr11	62416628	62416657	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr12	17552949	17553030	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	5	-7.3639
chr5	65952377	65952395	protein_coding	Ube2k	intron	ENSMUSG00000029203	ProperStrand	289	chr2	158185530	158185653	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	2	-5.8972
chr17	32334562	32334669	protein_coding	Brd4	utr3	ENSMUSG00000024002	ProperStrand	121	chr11	68887047	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	2	-4.9594
chr9	55984470	55984490	protein_coding	Tspan3	exon	ENSMUSG00000032324	ProperStrand	10	chr1	72895678	72895763	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	2	-20.0669
chr5	121655062	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	chr1	145626058	145626151	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	5	-3.6661
chr14	34780661	34780981	protein_coding	Zfp488	utr3	ENSMUSG00000044519	NonProperStrand	39	chr7	110699098	110699383	protein_coding	Olfr613	utr5	ENSMUSG00000078624	NonProperStrand	13	2	-19.3939
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr6	120467088	120468467	protein_coding	Cecr5	exon	ENSMUSG00000058979	ProperStrand	97	1	-12.1881
chr5	28087011	28087090	protein_coding	Paxip1	intron	ENSMUSG00000002221	ProperStrand	34	chr11	62416632	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-10.2068
chr11	60367860	60367960	protein_coding	Alkbh5	utr3	ENSMUSG00000042650	ProperStrand	203	chr15	5068442	5068478	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-3.7275
chr2	90235303	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	74718932	74719009	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	1	-0.9183
chr10	80586880	80586970	protein_coding	Map2k2	utr3	ENSMUSG00000035027	ProperStrand	26	chr18	35716696	35716776	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.6526
chr14	47894449	47894509	protein_coding	Wdhd1	exon	ENSMUSG00000037572	ProperStrand	35	chr4	131908689	131908768	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-5.6471
chr15	61935834	61935914	lincRNA	Pvt1	intron	ENSMUSG00000072566	ProperStrand	51	chr2	26493390	26493480	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-4.0473
chr13	103895241	103900205	protein_coding	Mast4	intron	ENSMUSG00000034751	ProperStrand	150	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	2	-9.6350
chr9	24549566	24549601	protein_coding	Tbx20	intron	ENSMUSG00000031965	NonProperStrand	110	chr9	15119632	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-3.0398
chr4	59766121	59766137	protein_coding	E130308A19Rik	utr3	ENSMUSG00000045071	ProperStrand	41	chr8	98269959	98270076	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	4	-19.2410
chr12	106455731	106455821	protein_coding	Tcl1	utr3	ENSMUSG00000041359	ProperStrand	27	chr9	15119666	15119746	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.0899
chr6	54379743	54379760	lincRNA	9130019P16Rik	exon	ENSMUSG00000073067	ProperStrand	255	chr1	181716914	181716987	protein_coding	Ahctf1	exon	ENSMUSG00000026491	ProperStrand	39	1	-11.2811
chr4	126699289	126699375	protein_coding	Sfpq	exon	ENSMUSG00000028820	ProperStrand	340	chr15	76910472	76910532	protein_coding	Rbfox2	utr3	ENSMUSG00000033565	ProperStrand	55	1	-10.0129
chr8	108048727	108048817	protein_coding	Atp6v0d1	utr3	ENSMUSG00000013160	ProperStrand	35	chr19	8963092	8963172	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.2191
chr7	54443812	54443878	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	chr6	115757998	115758098	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-2.1878
chr15	81431440	81431519	protein_coding	Ep300	exon	ENSMUSG00000055024	ProperStrand	118	chr4	131865951	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.8421
chr15	36705072	36705253	protein_coding	Ywhaz	exon	ENSMUSG00000022285	ProperStrand	73	chr8	13876098	13876161	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-6.7544
chr2	90235300	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	46022236	46022252	protein_coding	9130011E15Rik	intron	ENSMUSG00000039901	ProperStrand	129	1	-3.0438
chr7	20288559	20288625	protein_coding-noncoding	Tomm40	utr3	ENSMUSG00000002984	ProperStrand	1	chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-inf
chr6	108326706	108326765	protein_coding	Itpr1	intron	ENSMUSG00000030102	ProperStrand	94	chr4	86232354	86232409	snoRNA	ENSMUSG00000088958_Scarna8	.	ENSMUSG00000088958	ProperStrand	366	1	-8.7911
chr2	144405035	144405053	protein_coding	Sec23b	exon	ENSMUSG00000027429	ProperStrand	42	chr10	23505152	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-9.2230
chr12	119301895	119301912	protein_coding	Dnahc11	intron	ENSMUSG00000018581	ProperStrand	65	chr4	131908417	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.3054
chr3	88117179	88117279	protein_coding	Cct3	exon	ENSMUSG00000001416	ProperStrand	82	chr19	8799409	8799433	snoRNA	ENSMUSG00000065280_SNORD28	.	ENSMUSG00000065280	ProperStrand	269	2	-15.2870
chr19	44188385	44188451	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr4	116828391	116828452	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	7	-19.0560
chr1	18974608	18974624	LTR	LTR84a	ERVL	chr1LTR84a18974334	NonProperStrand	22	chr10	90432659	90432678	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	1	-12.6515
chr13	68759738	68764669	protein_coding	Adcy2	exon	ENSMUSG00000021536	ProperStrand	237	chr7	95459083	95459130	protein_coding	Ctsc	utr3	ENSMUSG00000030560	ProperStrand	5	1	-15.6959
chr5	137465051	137465475	protein_coding	Plod3	exon	ENSMUSG00000004846	NonProperStrand	8	chr1	162966020	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-7.6037
chr4	138932749	138932837	protein_coding	C230096C10Rik	utr3	ENSMUSG00000078517	ProperStrand	69	chr7	116664794	116664884	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.3115
chr7	4691730	4691754	protein_coding	Suv420h2	utr5	ENSMUSG00000059851	NonProperStrand	70	chr7	148634797	148634837	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	3	-9.1180
chr7	150253266	150253392	protein_coding	Cd81	utr3	ENSMUSG00000037706	ProperStrand	88	chr16	23110913	23110940	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-1.8728
chr18	12369068	12369090	protein_coding	Npc1	exon	ENSMUSG00000024413	ProperStrand	14	chr11	98878344	98878383	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-9.2205
chr10	80643851	80643984	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr16	90425563	90425579	protein_coding	Hunk	intron	ENSMUSG00000053414	ProperStrand	104	1	-5.0252
chr14	57314497	57315507	protein_coding	Mphosph8	exon	ENSMUSG00000079184	ProperStrand	29	chr10	39978434	39978486	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	2	-11.1429
chr9	108465124	108465166	protein_coding	Impdh2	exon	ENSMUSG00000062867	ProperStrand	74	chr19	8798739	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	4	-14.0187
chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	chr11	69483136	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-2.0382
chr11	62707247	62707268	protein_coding	Fam18b	intron	ENSMUSG00000014177	ProperStrand	23	chr7	52777709	52777725	protein_coding	Tulp2	exon	ENSMUSG00000023467	ProperStrand	24	1	-16.9567
chr1	137368785	137368826	protein_coding	Nav1	exon	ENSMUSG00000009418	ProperStrand	38	chr9	57385425	57385441	protein_coding	2310046O06Rik	utr5	ENSMUSG00000032305	ProperStrand	135	1	-12.6076
chr11	100959014	100959057	protein_coding	Fam134c	utr3	ENSMUSG00000017802	ProperStrand	11	chr14	56365366	56365389	protein_coding	2610027L16Rik	exon	ENSMUSG00000019297	ProperStrand	43	2	-inf
chr13	19684241	19684257	protein_coding	Epdr1	utr3	ENSMUSG00000002808	ProperStrand	46	chr5	113370707	113370723	protein_coding	Adrbk2	exon	ENSMUSG00000042249	ProperStrand	56	1	-13.9910
chr17	47739671	47739741	protein_coding	Bysl	exon	ENSMUSG00000023988	ProperStrand	48	chr2	26768393	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-6.0403
chr11	62416954	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	chr5	108334196	108336492	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	6	-1.3500
chr7	120682930	120684054	protein_coding	Far1	exon	ENSMUSG00000030759	ProperStrand	72	chr16	20684362	20684392	protein_coding	Eif4g1	intron	ENSMUSG00000045983	ProperStrand	199	1	-10.5418
chr7	29847176	29847229	protein_coding	Ryr1	exon	ENSMUSG00000030592	ProperStrand	27	chr19	8799855	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	6	-19.3484
chr9	107442483	107442512	protein_coding	Cyb561d2	exon	ENSMUSG00000037190	ProperStrand	5	chr2	26493389	26493489	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-8.7753
chr6	11956856	11957096	protein_coding	Phf14	exon	ENSMUSG00000029629	ProperStrand	26	chr2	119791876	119791914	protein_coding	Mga	utr3	ENSMUSG00000033943	ProperStrand	180	2	-19.8264
chr17	79250754	79250789	pseudogene	Gm6548	.	ENSMUSG00000091549	ProperStrand	33	chr7	51505240	51505308	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	1	-9.3537
chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	chr4	56910571	56910630	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-2.4938
chr19	8963028	8963182	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	chr4	132394297	132394462	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	5	-1.2925
chrX	12868344	12868554	protein_coding	Ddx3x	exon	ENSMUSG00000000787	ProperStrand	67	chr16	23111760	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.7307
chr12	8931671	8931751	protein_coding	Laptm4a	intron	ENSMUSG00000020585	ProperStrand	15	chr10	23505193	23505284	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-6.1124
chr16	11193638	11193738	protein_coding	Rsl1d1	exon	ENSMUSG00000005846	ProperStrand	65	chr16	23111438	23111466	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.1508
chr11	118900007	118900024	protein_coding	Cbx8	exon	ENSMUSG00000025578	ProperStrand	95	chr2	26494704	26494794	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-4.1017
chr6	28838619	28838780	protein_coding	Snd1	utr3	ENSMUSG00000001424	ProperStrand	210	chr15	34370545	34370664	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-2.7201
chr12	114402372	114402431	protein_coding	4930427A07Rik	utr3	ENSMUSG00000037466	ProperStrand	8	chr4	131908236	131908284	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-5.0428
chr5	74489206	74489286	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr1	71675903	71675993	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	1	-0.9220
chr8	113658521	113658542	protein_coding	Pdpr	exon	ENSMUSG00000033624	ProperStrand	49	chr7	29136529	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-4.7497
chr10	75359822	75360194	protein_coding	Smarcb1	exon	ENSMUSG00000000902	ProperStrand	109	chr11	69734691	69734747	protein_coding	Eif5a	utr5	ENSMUSG00000078812	ProperStrand	164	1	-10.0969
chr8	91556353	91556453	protein_coding	Sall1	exon	ENSMUSG00000031665	ProperStrand	96	chr17	13112530	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	7	-19.9357
chr13	47200987	47201020	protein_coding	Dek	exon	ENSMUSG00000021377	ProperStrand	36	chr16	23110971	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.8249
chr9	110846708	110848512	protein_coding	Tdgf1	utr5	ENSMUSG00000032494	ProperStrand	218	chr5	74489543	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	3	-4.5388
chr14	37944774	37944815	protein_coding	Ghitm	exon	ENSMUSG00000041028	ProperStrand	26	chr1	162966812	162966859	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	2	-12.7009
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr9	120038468	120038558	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	3	-2.7557
chr8	31436465	31436482	LINE	Lx7	L1	chr8Lx731436390	ProperStrand	23	chr11	6428102	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.0081
chr2	118268961	118272010	protein_coding	Eif2ak4	exon	ENSMUSG00000005102	NonProperStrand	4	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-8.7752
chr5	110660107	110660180	protein_coding	Ankle2	utr5	ENSMUSG00000029501	NonProperStrand	4	chr13	45001632	45001732	protein_coding	Jarid2	exon	ENSMUSG00000038518	ProperStrand	372	1	-15.3371
chr13	23830967	23831032	protein_coding	Hist1h1c	exon	ENSMUSG00000036181	NonProperStrand	6	chr16	23111764	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	NonProperStrand	47	1	-18.6589
chr7	36272159	36272239	protein_coding	Tdrd12	intron	ENSMUSG00000030491	ProperStrand	6	chr7	36576527	36576617	protein_coding	Zfp507	intron	ENSMUSG00000044452	NonProperStrand	1	1	-inf
chr5	130295428	130295508	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	chr16	18240809	18240899	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	1	-1.5354
chr5	29673345	29690493	protein_coding	Lmbr1	exon	ENSMUSG00000010721	ProperStrand	4	chr16	23110897	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-12.7696
chr8	47603653	47604351	protein_coding	Acsl1	exon	ENSMUSG00000018796	ProperStrand	23	chr9	15119647	15119727	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.3979
chr17	17517794	17517854	protein_coding	Riok2	exon	ENSMUSG00000023846	ProperStrand	8	chr16	23110965	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.2180
chr17	25953273	25953290	protein_coding	Fbxl16	intron	ENSMUSG00000025738	ProperStrand	12	chr11	106362638	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-10.6746
chr16	9577817	9577833	protein_coding	Grin2a	utr3	ENSMUSG00000059003	ProperStrand	10	chr2	26494708	26494808	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-6.5951
chr2	27089928	27091002	protein_coding	Sardh	exon	ENSMUSG00000009614	ProperStrand	6	chr11	30040305	30040355	protein_coding	Spnb2	intron	ENSMUSG00000020315	ProperStrand	103	1	-16.9858
chr3	96654255	96654271	protein_coding	Pdzk1	exon	ENSMUSG00000038298	ProperStrand	101	chr19	8798484	8798516	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-4.2122
chr17	46860746	46860779	protein_coding-noncoding	Pex6	utr5	ENSMUSG00000002763	ProperStrand	30	chr10	62045811	62047443	protein_coding	Ddx21	exon	ENSMUSG00000020075	ProperStrand	137	30	-inf
chr10	63552101	63552119	protein_coding	Lrrtm3	exon	ENSMUSG00000042846	ProperStrand	63	chr18	35716684	35716761	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.0896
chr10	114929429	114929448	protein_coding	Lgr5	intron	ENSMUSG00000020140	NonProperStrand	13	chr15	101920314	101920342	protein_coding	Eif4b	exon	ENSMUSG00000058655	ProperStrand	484	1	-12.2475
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr8	73115775	73115791	protein_coding	Ell	utr3	ENSMUSG00000070002	NonProperStrand	134	1	-7.1145
chr2	90235293	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	125741087	125741105	protein_coding	4732415M23Rik	intron	ENSMUSG00000048478	ProperStrand	88	2	-6.3220
chr4	63080471	63092886	protein_coding	Whrn	exon	ENSMUSG00000039137	ProperStrand	20	chr1	82482162	82482178	protein_coding	Col4a4	exon	ENSMUSG00000067158	ProperStrand	12	1	-18.9596
chr1	83019051	83019068	protein_coding	Slc19a3	exon	ENSMUSG00000038496	NonProperStrand	20	chr16	33726533	33726550	protein_coding	Heg1	exon	ENSMUSG00000075254	NonProperStrand	37	1	-16.5268
chr19	57074602	57074619	protein_coding	Afap1l2	intron	ENSMUSG00000025083	NonProperStrand	1	chr16	23110856	23110955	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr3	37750806	37750824	LINE	L1_Mus3	L1	chr3L1_Mus337750762	ProperStrand	38	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-11.6854
chr15	51628052	51629179	protein_coding	Eif3h	exon	ENSMUSG00000022312	ProperStrand	45	chr3	82816757	82816774	protein_coding	Fgg	exon	ENSMUSG00000033860	NonProperStrand	321	1	-10.5320
chr4	41062305	41062360	protein_coding	Nol6	utr3	ENSMUSG00000028430	ProperStrand	98	chr14	33005138	33005235	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	3	-7.8387
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr6	111396936	111396952	protein_coding	Grm7	intron	ENSMUSG00000056755	NonProperStrand	19	1	-11.2561
chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	chr11	98878344	98878374	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-1.9398
chr2	130103432	130103486	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	chr8	13876093	13876123	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-2.2143
chr7	17500837	17500937	protein_coding	Calm3	utr3	ENSMUSG00000019370	ProperStrand	28	chr9	15118331	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-4.9141
chr11	75317182	75317236	protein_coding	Prpf8	utr3	ENSMUSG00000020850	ProperStrand	255	chr5	121655027	121655127	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-2.5183
chr7	34996031	34996099	protein_coding	Gpi1	intron	ENSMUSG00000036427	ProperStrand	288	chr17	26360446	26360536	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	1	-6.9022
chr8	98412207	98412255	protein_coding	Got2	utr5	ENSMUSG00000031672	ProperStrand	85	chr18	35102297	35102337	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-5.9033
chr4	137077404	137077734	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	chr19	57435752	57435769	protein_coding	Fam160b1	utr5	ENSMUSG00000033478	ProperStrand	49	1	-8.5103
chr2	121176333	121176349	protein_coding	Ppip5k1	exon	ENSMUSG00000033526	ProperStrand	85	chr10	90581196	90581240	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-4.1425
chr17	24665419	24665442	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	chr7	52381722	52381805	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	2	-0.9603
chr11	119130656	119130674	protein_coding	Gaa	intron	ENSMUSG00000025579	NonProperStrand	201	chr8	64017614	64028377	protein_coding	Palld	exon	ENSMUSG00000058056	NonProperStrand	125	1	-9.4161
chr7	86279071	86279137	protein_coding	Mfge8	utr3	ENSMUSG00000030605	ProperStrand	73	chr8	13416896	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-6.0672
chr5	123622050	123622066	protein_coding	Hpd	exon	ENSMUSG00000029445	ProperStrand	254	chr10	122378501	122378517	protein_coding	Ppm1h	utr3	ENSMUSG00000034613	NonProperStrand	21	1	-12.5470
chr14	34780594	34780993	protein_coding	Zfp488	utr3	ENSMUSG00000044519	ProperStrand	54	chr7	110699281	110699390	protein_coding	Olfr613	utr5	ENSMUSG00000078624	ProperStrand	16	2	-20.1495
chr10	11015231	11015309	protein_coding	Fbxo30	utr3	ENSMUSG00000047648	ProperStrand	7	chr5	130300458	130300548	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-6.6707
chr2	125499562	125499579	protein_coding	Eid1	utr3	ENSMUSG00000091337	ProperStrand	60	chr9	120037898	120037980	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-4.7058
chr12	111932012	111932261	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr19	8798487	8798553	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	5	-5.8801
chr2	10111461	10111478	protein_coding	Itih5	intron	ENSMUSG00000025780	NonProperStrand	12	chr5	121655037	121655086	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-6.9120
chr17	13115724	13115757	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	chr17	24856620	24856720	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	3	-3.7965
chr6	131849494	131849584	LINE	L1Md_F2	L1	chr6L1Md_F2131848679	NonProperStrand	1	chr14	34780811	34780901	protein_coding	Zfp488	utr3	ENSMUSG00000044519	ProperStrand	54	1	-inf
chr11	51825105	51825178	protein_coding	Cdkl3	intron	ENSMUSG00000020389	ProperStrand	14	chr16	23110912	23111002	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.2008
chr17	34076576	34076705	protein_coding	H2-Ke2	exon	ENSMUSG00000024309	ProperStrand	8	chr2	26768412	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	2	-15.5050
chr9	115153003	115153083	protein_coding	Stt3b	utr3	ENSMUSG00000032437	ProperStrand	66	chr9	110288539	110288564	protein_coding	Ptpn23	exon	ENSMUSG00000036057	ProperStrand	34	3	-18.9124
chr9	70960076	70960093	protein_coding	Aqp9	exon	ENSMUSG00000032204	NonProperStrand	118	chr18	35716733	35716760	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.1550
chr5	34112034	34112050	protein_coding	Letm1	exon	ENSMUSG00000005299	NonProperStrand	145	chr5	116010967	116011009	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	1	-8.3824
chr11	5774858	5775102	protein_coding	Pold2	exon	ENSMUSG00000020471	ProperStrand	58	chr11	69483183	69483273	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-4.4245
chr4	131908689	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	chr1	59761637	59761714	snoRNA	ENSMUSG00000089093_Snord11	.	ENSMUSG00000089093	ProperStrand	193	4	-1.3126
chr11	98025190	98025206	protein_coding	Med1	exon	ENSMUSG00000018160	NonProperStrand	13	chr11	116938556	116938685	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-9.2464
chr11	51417967	51418184	protein_coding	Hnrnpab	exon	ENSMUSG00000020358	ProperStrand	124	chr7	118219599	118219679	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-4.9308
chr7	133638772	133639001	protein_coding	Atxn2l	exon	ENSMUSG00000032637	ProperStrand	219	chr10	23505150	23505220	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	6	-2.2996
chr10	42399185	42402974	protein_coding	Ostm1	exon	ENSMUSG00000038280	ProperStrand	14	chr7	117166723	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-7.7158
chr3	82707847	82707863	antisense	4930564K09Rik	.	ENSMUSG00000086273	ProperStrand	48	chr7	31917635	31917781	protein_coding	Gramd1a	exon	ENSMUSG00000001248	ProperStrand	24	2	-19.8171
chr19	57532602	57538863	protein_coding	Trub1	exon	ENSMUSG00000025086	ProperStrand	19	chr2	152717210	152717858	protein_coding	Tpx2	exon	ENSMUSG00000027469	ProperStrand	111	1	-14.4190
chr11	86022008	86022024	antisense	4632419I22Rik	.	ENSMUSG00000085208	ProperStrand	33	chr13	60830799	60830876	protein_coding	Dapk1	exon	ENSMUSG00000021559	ProperStrand	109	1	-13.3186
chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	chr8	87185447	87185499	protein_coding	Ier2	utr3	ENSMUSG00000053560	ProperStrand	22	1	-11.2396
chr9	15119967	15120042	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	chr2	91436228	91436337	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	5	-9.2850
chr17	27838848	27838864	protein_coding	Pacsin1	exon	ENSMUSG00000040276	ProperStrand	15	chr4	131908310	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.7937
chr9	44860387	44860478	protein_coding	Mpzl2	utr3	ENSMUSG00000032092	ProperStrand	31	chr4	131908360	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	18	-19.3885
chr9	100966289	100966307	SINE	B4A	B4	chr9B4A100966214	ProperStrand	51	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-11.0907
chrX	71638397	71638474	protein_coding	Fam3a	utr5	ENSMUSG00000031399	ProperStrand	3	chr16	23110852	23110942	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr3	34549459	34549559	protein_coding	Sox2	exon	ENSMUSG00000074637	ProperStrand	299	chr16	32243899	32243940	snoRNA	ENSMUSG00000080440_SNORA79	.	ENSMUSG00000080440	ProperStrand	140	1	-8.3984
chr12	78511141	78511231	protein_coding	Fut8	intron	ENSMUSG00000021065	NonProperStrand	9	chr11	69483197	69483282	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-14.4296
chr8	86560165	86560270	protein_coding	Il27ra	exon	ENSMUSG00000005465	ProperStrand	1	chr16	23111434	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-inf
chr10	42254674	42254733	protein_coding	Snx3	utr3	ENSMUSG00000019804	ProperStrand	19	chr10	23505193	23505284	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.1073
chr7	52331749	52331765	protein_coding	Nosip	exon	ENSMUSG00000003421	ProperStrand	27	chr8	73419696	73419786	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.6289
chr18	35102297	35102342	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	chr14	33005094	33005210	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	15	-7.5751
chr7	142355043	142355133	protein_coding	Dock1	exon	ENSMUSG00000058325	ProperStrand	22	chr16	23111705	23111776	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.6613
chr2	26449094	26449135	protein_coding	Agpat2	utr3	ENSMUSG00000026922	ProperStrand	18	chr11	69481335	69481419	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.5024
chr7	144311611	144311629	protein_coding	Mgmt	intron	ENSMUSG00000054612	ProperStrand	14	chr4	116862584	116862663	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	1	-11.8021
chr3	95466084	95466184	protein_coding	Mcl1	utr3	ENSMUSG00000038612	ProperStrand	75	chr1	63225690	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-6.2270
chrX	137959056	137959074	protein_coding	Col4a5	intron	ENSMUSG00000031274	ProperStrand	8	chr16	57391601	57391717	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	1	-14.4353
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr18	78313257	78316891	protein_coding	Slc14a1	utr5	ENSMUSG00000059336	ProperStrand	7	1	-12.1561
chr1	88247813	88247864	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	chr13	96102605	96102695	snoRNA	ENSMUSG00000077380_SNORA68	.	ENSMUSG00000077380	ProperStrand	51	1	-5.4134
chr1	138392577	138393157	protein_coding	Kif14	exon	ENSMUSG00000041498	ProperStrand	13	chr4	131908236	131908293	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.0703
chr17	68154794	68157175	protein_coding	Lama1	exon	ENSMUSG00000032796	ProperStrand	168	chr7	116664834	116664914	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	7	-9.8129
chr17	24743933	24743982	protein_coding	Tsc2	intron	ENSMUSG00000002496	ProperStrand	27	chr9	15119319	15119426	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	6	-inf
chr18	73693166	73693186	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr14	65372790	65372890	snoRNA	ENSMUSG00000064442_SNORA36	.	ENSMUSG00000064442	ProperStrand	296	3	-6.6830
chr11	6519836	6519944	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	2	-1.5168
chr1	71656060	71695874	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr1	162965532	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	12	-6.7014
chr11	77996558	77996613	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	chr1	39605640	39605691	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-0.9148
chrX	91785657	91785737	protein_coding	Maged1	exon	ENSMUSG00000025151	ProperStrand	43	chr19	8963051	8963141	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.8490
chr5	74489202	74489620	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr12	88778680	88778732	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	8	-6.2906
chr17	26333883	26333900	protein_coding	Pdia2	exon	ENSMUSG00000024184	NonProperStrand	2	chr4	131865856	131865946	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-8.7800
chr14	56159294	56159311	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	chr11	78150285	78150301	protein_coding	Pigs	exon	ENSMUSG00000041958	NonProperStrand	138	1	-9.2688
chr16	90225434	90226421	protein_coding	Sod1	exon	ENSMUSG00000022982	ProperStrand	75	chr4	131908688	131908751	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.9361
chr16	54679541	54679559	LTR	MYSERV16_I-int	ERVK	chr16MYSERV16_I-int54679027	NonProperStrand	31	chr16	23110962	23110999	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0062
chr6	140499622	140499712	protein_coding	Plekha5	exon	ENSMUSG00000030231	ProperStrand	33	chr5	121655018	121655098	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.8873
chr12	34802711	34802729	protein_coding	Hdac9	intron	ENSMUSG00000004698	NonProperStrand	25	chr13	56804912	56804928	protein_coding	Smad5	utr5	ENSMUSG00000021540	ProperStrand	47	1	-15.5993
chr10	66692637	66692727	protein_coding	Jmjd1c	exon	ENSMUSG00000037876	ProperStrand	110	chr19	8963081	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-4.0093
chr2	130101967	130102001	protein_coding-noncoding	Nop56	utr5	ENSMUSG00000027405	ProperStrand	19	chr4	131908236	131908296	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.3472
chr4	43439371	43439471	protein_coding	Rusc2	exon	ENSMUSG00000035969	ProperStrand	22	chr7	150717298	150717348	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-7.5037
chr1	84762646	84765207	protein_coding	Trip12	exon	ENSMUSG00000026219	ProperStrand	248	chr14	76247720	76247800	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-1.6982
chr9	15118231	15118321	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	chr4	131865393	131865473	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	11	-18.4522
chr7	133315748	133315828	protein_coding	Xpo6	intron	ENSMUSG00000000131	ProperStrand	36	chr17	56757179	56757269	protein_coding	Lonp1	exon	ENSMUSG00000041168	ProperStrand	83	1	-13.6943
chr11	75475098	75475289	protein_coding	Myo1c	exon	ENSMUSG00000017774	ProperStrand	38	chr9	21309964	21310000	protein_coding	Dnm2	exon	ENSMUSG00000033335	ProperStrand	48	1	-14.6826
chr6	71832550	71832689	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	chr5	74489543	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	17	-3.3325
chr17	35972375	35972465	protein_coding	Tubb5	exon	ENSMUSG00000001525	ProperStrand	624	chr17	35088970	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	33	-18.8859
chr5	108336363	108336487	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	chr3	108357258	108357581	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	12	-1.2200
chr15	11680093	11680109	LINE	Lx7	L1	chr15Lx711680097	NonProperStrand	6	chr7	117189863	117189922	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-10.9406
chr18	32249109	32249130	protein_coding	Iws1	exon	ENSMUSG00000024384	ProperStrand	72	chr2	26246085	26246684	protein_coding	Pmpca	exon	ENSMUSG00000026926	ProperStrand	45	2	-inf
chr8	13494359	13494430	protein_coding	Gas6	utr5	ENSMUSG00000031451	ProperStrand	27	chr4	138576794	138576810	protein_coding	Tmco4	exon	ENSMUSG00000041143	ProperStrand	47	1	-15.4364
chr12	114290175	114290191	protein_coding	Pacs2	intron	ENSMUSG00000021143	NonProperStrand	302	chr16	5244747	5244852	protein_coding	Fam86	utr3	ENSMUSG00000022544	ProperStrand	231	1	-7.3835
chr16	28427797	28427817	protein_coding	Fgf12	intron	ENSMUSG00000022523	ProperStrand	14	chr11	69483135	69483189	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-5.1730
chr1	120577282	120579542	protein_coding	Tfcp2l1	utr3	ENSMUSG00000026380	ProperStrand	158	chr7	29136535	29136654	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	5	-5.9617
chrX	71026545	71027099	protein_coding	Idh3g	exon	ENSMUSG00000002010	ProperStrand	10	chr4	131865859	131865939	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.0395
chr9	100978459	100978483	protein_coding	Msl2	utr5	ENSMUSG00000066415	NonProperStrand	9	chr10	41644311	41644329	protein_coding	Armc2	exon	ENSMUSG00000071324	ProperStrand	281	2	-19.4999
chr15	77597977	77597993	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr2	89368462	89368479	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	2	-9.5704
chr10	98478151	98478203	protein_coding	Atp2b1	exon	ENSMUSG00000019943	ProperStrand	31	chr18	76297633	76297649	protein_coding	Zbtb7c	exon	ENSMUSG00000044646	ProperStrand	64	1	-14.5102
chr17	35822057	35822257	protein_coding	Ddr1	exon	ENSMUSG00000003534	ProperStrand	129	chr15	34370545	34370671	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-2.2041
chr11	96680251	96680351	protein_coding	Nfe2l1	utr3	ENSMUSG00000038615	ProperStrand	118	chr11	69483136	69483199	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.3853
chr5	128143732	128145072	protein_coding	Glt1d1	exon	ENSMUSG00000049971	ProperStrand	13	chr18	35716810	35716883	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.9970
chr7	36278857	36278946	protein_coding	Tdrd12	exon	ENSMUSG00000030491	ProperStrand	6	chr7	150717298	150717367	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-10.2214
chr3	88336674	88339996	protein_coding	Mex3a	exon	ENSMUSG00000074480	ProperStrand	7	chr1	162967534	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-7.7490
chr8	95505795	95505812	protein_coding	Slc6a2	exon	ENSMUSG00000055368	NonProperStrand	21	chr11	69481389	69481479	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.1963
chr6	146991382	146991398	protein_coding	Mrps35	exon	ENSMUSG00000040112	NonProperStrand	27	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-10.5386
chr5	107065514	107065594	protein_coding	Zfp644	exon	ENSMUSG00000049606	ProperStrand	35	chr16	23110870	23110960	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.7567
chr11	72553558	72553989	protein_coding	Ankfy1	exon	ENSMUSG00000020790	ProperStrand	68	chr4	131866246	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	5	-14.6553
chr10	86166301	86167083	protein_coding	Hsp90b1	exon	ENSMUSG00000020048	ProperStrand	396	chr7	35130956	35136306	protein_coding	Lsm14a	utr3	ENSMUSG00000066568	ProperStrand	31	1	-10.8661
chr11	60370851	60370949	protein_coding	Alkbh5	utr3	ENSMUSG00000042650	ProperStrand	203	chr7	117166803	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-2.5741
chr2	25292010	25292192	protein_coding	Abca2	exon	ENSMUSG00000026944	ProperStrand	57	chr7	116663634	116663724	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.6000
chr8	112387973	112387989	antisense	Gm17344	.	ENSMUSG00000078143	NonProperStrand	100	chr6	86338755	86338837	protein_coding	Pcyox1	exon	ENSMUSG00000029998	ProperStrand	17	1	-14.8623
chr8	55606183	55606209	antisense	Spcs3	.	ENSMUSG00000054408	ProperStrand	30	chr8	125416084	125416174	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	1	-11.0156
chr11	32326232	32326289	protein_coding	Sh3pxd2b	utr3	ENSMUSG00000040711	ProperStrand	11	chr9	15119700	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	4	-18.4407
chr3	144808278	144808329	protein_coding	Odf2l	intron	ENSMUSG00000028256	ProperStrand	10	chr18	35716788	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-5.5279
chr5	31191720	31191737	protein_coding	Agbl5	utr5	ENSMUSG00000029165	ProperStrand	12	chr16	23110841	23110867	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.4686
chr5	45888178	45888622	protein_coding	Lap3	exon	ENSMUSG00000039682	ProperStrand	87	chr4	131908814	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	8	-10.4544
chr13	69673213	69673238	protein_coding	Nsun2	intron	ENSMUSG00000021595	NonProperStrand	9	chrX	34622906	34623018	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-6.8852
chr4	126384828	126384885	protein_coding-noncoding	Psmb2	utr5	ENSMUSG00000028837	ProperStrand	4	chr7	148634790	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	4	-inf
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr11	77996560	77996630	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-1.7860
chr6	69657216	69657233	LTR	IAPEz-int	ERVK	chr6IAPEz-int69657165	NonProperStrand	42	chr11	62416601	62416635	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-5.8648
chr4	148763913	148764003	protein_coding	Ube4b	intron	ENSMUSG00000028960	ProperStrand	66	chr15	72824954	72825043	protein_coding	Trappc9	intron	ENSMUSG00000047921	ProperStrand	44	1	-13.7467
chr18	57400307	57400324	protein_coding	Megf10	exon	ENSMUSG00000024593	ProperStrand	143	chr5	54389948	54389966	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	1	-9.0410
chr8	105560721	105560738	LINE	L1VL4	L1	chr8L1VL4105560332	NonProperStrand	17	chr14	55263000	55263042	protein_coding	Acin1	exon	ENSMUSG00000022185	ProperStrand	67	3	-19.1723
chr10	102143892	102143913	SINE	MIR	MIR	chr10MIR102143893	NonProperStrand	1	chr16	23111775	23111821	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-inf
chr13	107737212	107737228	protein_coding	Dimt1	utr5	ENSMUSG00000021692	ProperStrand	185	chr6	70794802	70794819	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	1	-9.1648
chr16	23111770	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	chr12	110874223	110874290	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	4	-1.2235
chr8	81223364	81223454	protein_coding	Slc10a7	intron	ENSMUSG00000031684	ProperStrand	55	chr8	85584539	85584629	protein_coding	Rnf150	intron	ENSMUSG00000047747	ProperStrand	8	1	-17.3253
chr7	65913652	65913693	protein_coding	Atp10a	utr5	ENSMUSG00000025324	ProperStrand	37	chr7	116663640	116663713	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.3721
chr10	60886439	60887274	protein_coding	Nodal	exon	ENSMUSG00000037171	ProperStrand	30	chr12	112916986	112917003	protein_coding	Trmt61a	exon	ENSMUSG00000060950	NonProperStrand	1	1	-inf
chr18	63145879	63146069	protein_coding	Napg	exon	ENSMUSG00000024581	ProperStrand	17	chr16	23110913	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-3.4874
chr8	86464148	86464238	protein_coding	Lphn1	utr3	ENSMUSG00000013033	ProperStrand	221	chr19	45588548	45590359	protein_coding	Btrc	exon	ENSMUSG00000025217	ProperStrand	14	1	-13.6659
chr11	23187406	23187451	protein_coding	Xpo1	exon	ENSMUSG00000020290	ProperStrand	123	chr2	166890561	166890581	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-6.1361
chr11	97641455	97641555	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	chr1	88252836	88252902	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-1.6468
chr8	75071970	75071987	protein_coding	Med26	utr5	ENSMUSG00000045248	ProperStrand	45	chr15	79913297	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.1312
chr19	46110476	46110784	protein_coding	Ldb1	exon	ENSMUSG00000025223	ProperStrand	42	chr3	108357262	108357342	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-5.2300
chr7	119748243	119748262	SINE	B4	B4	chr7B4119748188	ProperStrand	4	chr10	23505193	23505257	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-6.2798
chr2	120552385	120552468	protein_coding	Cdan1	exon	ENSMUSG00000027284	ProperStrand	13	chr4	117317930	117317964	protein_coding	Eri3	intron	ENSMUSG00000033423	ProperStrand	246	3	-19.7005
chr5	28743085	28743103	protein_coding	Rbm33	utr3	ENSMUSG00000048271	NonProperStrand	8	chr12	42804595	42804653	protein_coding	Immp2l	intron	ENSMUSG00000056899	ProperStrand	21	3	-18.7478
chr19	41993050	41993103	protein_coding	Pgam1	utr3	ENSMUSG00000011752	ProperStrand	124	chr7	106627731	106627839	protein_coding	Rps3	utr3	ENSMUSG00000030744	ProperStrand	159	1	-9.9007
chr13	53437794	53437811	protein_coding	Sptlc1	intron	ENSMUSG00000021468	ProperStrand	33	chr12	21308329	21311225	protein_coding	Cpsf3	exon	ENSMUSG00000054309	ProperStrand	24	1	-16.3619
chr1	88248581	88248662	snoRNA	ENSMUSG00000064696_SNORD20	.	ENSMUSG00000064696	ProperStrand	89	chr4	131866155	131866245	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-2.9487
chr11	118900007	118900023	protein_coding	Cbx8	exon	ENSMUSG00000025578	ProperStrand	95	chr19	8799592	8799644	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	2	-9.5400
chr10	23505559	23505627	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	chr7	118219574	118219642	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	12	-9.9067
mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr5	130357116	130357172	protein_coding	Chchd2	utr3	ENSMUSG00000070493	ProperStrand	16	1	-8.5577
chr16	87722784	87730688	protein_coding	Bach1	utr3	ENSMUSG00000025612	ProperStrand	32	chr16	23110902	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	11	-18.8597
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr7	52222191	52222207	protein_coding	Cpt1c	exon	ENSMUSG00000007783	NonProperStrand	11	1	-12.1770
chr3	113827103	113827119	protein_coding	Col11a1	utr3	ENSMUSG00000027966	NonProperStrand	139	chr6	71832635	71832685	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-3.9981
chr1	71662069	71662108	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr4	149091872	149091962	protein_coding	Tmem201	utr3	ENSMUSG00000044700	ProperStrand	60	2	-12.5214
chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	chr17	23890399	23890454	protein_coding	Flywch1	utr3	ENSMUSG00000040097	ProperStrand	15	1	-12.0923
chr4	53873624	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	chr2	166890780	166890829	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	1	-6.1414
chr16	91659686	91659702	protein_coding	Son	exon	ENSMUSG00000022961	NonProperStrand	4	chr11	6428108	6428155	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-8.6824
chr2	162759284	162759432	protein_coding	Srsf6	exon	ENSMUSG00000016921	ProperStrand	30	chr14	52829476	52829509	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	3	-inf
chr10	79756618	79756808	protein_coding	Rps15	exon	ENSMUSG00000063457	ProperStrand	119	chr11	62418044	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	9	-19.5450
chr2	90235286	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	75045959	75045976	protein_coding	Birc6	exon	ENSMUSG00000024073	NonProperStrand	36	1	-5.4531
chr1	182503917	182507782	protein_coding	Parp1	exon	ENSMUSG00000026496	ProperStrand	227	chr12	81492597	81492661	snoRNA	ENSMUSG00000088158_Scarna3b	.	ENSMUSG00000088158	ProperStrand	147	1	-8.8497
chr16	57391724	57391781	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr17	24856653	24856753	protein_coding	Rps2	intron	ENSMUSG00000044533	ProperStrand	373	1	-6.6657
chr2	90235313	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	6297114	6297130	protein_coding	Zmiz2	exon	ENSMUSG00000041164	ProperStrand	69	1	-4.1968
chr9	15130707	15130791	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	chr6	131330290	131330308	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	ProperStrand	408	2	-8.8649
chr5	116314936	116429777	protein_coding	Cit	exon	ENSMUSG00000029516	ProperStrand	45	chr16	23110843	23110982	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-2.1851
chr10	80924705	80924795	protein_coding	Celf5	utr3	ENSMUSG00000034818	ProperStrand	16	chr2	145076805	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	2	-16.5157
chr10	121044668	121046214	protein_coding	Xpot	exon	ENSMUSG00000034667	ProperStrand	35	chr9	120039543	120039633	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-4.3274
chr7	114886563	114886579	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	chr10	127521200	127521218	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	1	-4.3955
chr4	120231469	120234013	protein_coding	Ctps	exon	ENSMUSG00000028633	NonProperStrand	24	chr17	24857716	24857775	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.9467
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	1	-7.2227
chr17	35299561	35299642	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	chr13	4223388	4223449	tRNA	tRNA1041-LysCTT	.	1482143	ProperStrand	2	1	-12.1686
chr2	146125210	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	chr7	87226939	87226999	protein_coding	Zfp710	exon	ENSMUSG00000048897	ProperStrand	229	1	-8.3847
chr1	133252377	133252426	protein_coding	Srgap2	intron	ENSMUSG00000026425	ProperStrand	299	chr9	15118327	15118377	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	3	-2.9938
chr17	34934786	34934807	pseudogene	Tnxa	.	ENSMUSG00000092200	NonProperStrand	4	chr7	116664819	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-20.7252
chr2	58368502	58368520	protein_coding	Acvr1	utr5	ENSMUSG00000026836	NonProperStrand	6	chr15	82980092	82980192	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-11.8854
chr10	42120199	42135374	protein_coding	Lace1	exon	ENSMUSG00000038302	ProperStrand	12	chr17	35087894	35087946	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-8.4310
chr10	86643855	86643872	protein_coding	1700113H08Rik	intron	ENSMUSG00000047129	ProperStrand	3	chr9	120038552	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-9.2011
chr12	112106528	112106612	protein_coding	Zfp839	exon	ENSMUSG00000021271	ProperStrand	5	chr4	131908689	131908746	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.7672
chr17	44174593	44174653	protein_coding	Rcan2	utr3	ENSMUSG00000039601	ProperStrand	10	chr16	23111375	23111465	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.3721
chr10	90586664	90586682	protein_coding	Slc25a3	utr5	ENSMUSG00000061904	ProperStrand	74	chr7	116664809	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.1951
chr4	40586273	40586289	LINE	L1_Mur3	L1	chr4L1_Mur340586139	ProperStrand	1	chr4	131908753	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-inf
chr5	123447391	123447407	lincRNA	A930024E05Rik	exon	ENSMUSG00000056735	ProperStrand	17	chr9	72970659	72970675	protein_coding	Rsl24d1	utr3	ENSMUSG00000032215	ProperStrand	8	1	-19.2248
chr15	77792989	77793635	protein_coding	Eif3d	exon	ENSMUSG00000016554	ProperStrand	69	chr1	44144891	44145343	protein_coding	1700029F09Rik	exon	ENSMUSG00000026049	ProperStrand	19	1	-15.3656
chr6	84072807	84072823	protein_coding	Dysf	intron	ENSMUSG00000033788	NonProperStrand	9	chr18	35716830	35716865	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-5.7446
chr14	61823262	61823352	protein_coding	Sacs	exon	ENSMUSG00000048279	ProperStrand	65	chr17	35089182	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-5.3290
chr5	122025125	122025203	protein_coding	Aldh2	exon	ENSMUSG00000029455	ProperStrand	108	chr5	108336377	108336464	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-3.7659
chr3	32613483	32614366	protein_coding	Actl6a	exon	ENSMUSG00000027671	ProperStrand	31	chr9	15119648	15119738	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	6	-18.7311
chr10	20080843	20080859	protein_coding	Fam54a	utr3	ENSMUSG00000019992	ProperStrand	232	chr5	143665340	143665392	protein_coding	Actb	utr3	ENSMUSG00000029580	ProperStrand	446	1	-6.6054
chr15	75731684	75739700	protein_coding	Eef1d	utr5	ENSMUSG00000055762	ProperStrand	99	chr16	23111374	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-2.3312
chr8	124103115	124103140	protein_coding	Gm20388	intron	ENSMUSG00000092329	NonProperStrand	203	chr4	56910496	56910617	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-3.7652
chr2	37288311	37288411	protein_coding	Zbtb26	utr3	ENSMUSG00000050714	ProperStrand	4	chr5	130300476	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-7.9077
chr9	95379381	95379471	protein_coding	2610101N10Rik	intron	ENSMUSG00000032407	ProperStrand	56	chr5	130300431	130300511	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.6284
chr2	179322380	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr9	64143792	64143866	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	2	-9.2959
chr9	64022775	64023091	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	chr15	79908931	79908955	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	4	-5.7689
chr5	120118339	120118356	antisense	Gm2301	.	ENSMUSG00000087516	ProperStrand	10	chr7	52975373	52975708	protein_coding	Rpl18	exon	ENSMUSG00000059070	ProperStrand	116	1	-15.6519
chr9	105546616	105546696	protein_coding	Pik3r4	exon	ENSMUSG00000032571	ProperStrand	49	chr17	6958338	6958969	protein_coding	Ezr	exon	ENSMUSG00000052397	ProperStrand	126	18	-inf
chr4	32850143	32850233	protein_coding	Mdn1	exon	ENSMUSG00000058006	ProperStrand	184	chr7	117166761	117166841	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-2.7439
chr12	85350481	85350499	protein_coding	Acot1	utr5	ENSMUSG00000072949	ProperStrand	72	chr7	116663718	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.2046
chr1	138382212	138382230	protein_coding	Kif14	intron	ENSMUSG00000041498	NonProperStrand	36	chr5	130300419	130300513	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.4201
chr7	13516146	13516197	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr18	75161562	75161595	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-2.7801
chr7	139765031	139765048	protein_coding	Oat	intron	ENSMUSG00000030934	NonProperStrand	7	chr14	76247909	76247977	protein_coding	Tpt1	utr3	ENSMUSG00000060126	ProperStrand	236	1	-14.9790
chr7	13511763	13511823	protein_coding	Rps5	exon	ENSMUSG00000012848	ProperStrand	108	chr11	69483136	69483192	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-4.4137
chr2	68943098	68943198	protein_coding	Lass6	exon	ENSMUSG00000027035	ProperStrand	32	chr13	113342177	113342193	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	1	-10.0296
chr15	6277197	6277287	protein_coding	Dab2	intron	ENSMUSG00000022150	ProperStrand	3	chr2	119464601	119464681	protein_coding	Nusap1	intron	ENSMUSG00000027306	NonProperStrand	4	1	-inf
chr15	36538077	36538114	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr16	5256015	5256031	protein_coding	Fam86	utr5	ENSMUSG00000022544	ProperStrand	231	1	-5.2269
chr5	136614841	136615335	protein_coding	Alkbh4	utr5	ENSMUSG00000039754	ProperStrand	40	chr11	97643008	97643061	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.1871
chr7	127797525	127799617	protein_coding	Uqcrc2	exon	ENSMUSG00000030884	ProperStrand	26	chr7	116663659	116663759	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.0328
chr19	43579408	43579425	protein_coding	Got1	intron	ENSMUSG00000025190	NonProperStrand	147	chr7	129133043	129133098	protein_coding	Gga2	utr3	ENSMUSG00000030872	ProperStrand	65	1	-11.3540
chr11	6428060	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr5	125884616	125884655	tRNA	tRNA1317-AlaTGC	.	208374	ProperStrand	149	2	-3.0742
chr8	108949006	108949106	protein_coding	Zfp90	exon	ENSMUSG00000031907	ProperStrand	8	chr16	23110517	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	8	-inf
chr15	79913296	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr16	10600307	10600324	protein_coding	Clec16a	intron	ENSMUSG00000068663	NonProperStrand	10	1	-7.1231
chr14	22663145	22664424	protein_coding	Vdac2	exon	ENSMUSG00000021771	ProperStrand	18	chrX	71517888	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	4	-19.6183
chr18	10052133	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr17	25296587	25296603	protein_coding	Clcn7	exon	ENSMUSG00000036636	ProperStrand	94	1	-7.9035
chr11	54533192	54533800	protein_coding	Cdc42se2	utr3	ENSMUSG00000052298	ProperStrand	9	chr17	35299525	35299605	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-8.5954
chr12	112499786	112499805	protein_coding	Traf3	exon	ENSMUSG00000021277	NonProperStrand	5	chr5	130295414	130295506	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	2	-16.6042
chr5	114196792	114197938	protein_coding	Sart3	exon	ENSMUSG00000018974	ProperStrand	50	chr18	33954884	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-3.8442
chr7	91031860	91031879	protein_coding	Mesdc1	utr5	ENSMUSG00000070462	ProperStrand	19	chr2	91436271	91436336	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	3	-20.0702
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chrX	91435146	91435177	protein_coding	Eif2s3x	utr3	ENSMUSG00000035150	NonProperStrand	83	1	-7.3275
chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	chr15	36535670	36538091	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	1	-3.8930
chr7	82922784	82922866	LTR	RLTR14-int	ERV1	chr7RLTR14-int82922508	ProperStrand	2	chr15	68780234	68780268	protein_coding	Khdrbs3	intron	ENSMUSG00000022332	ProperStrand	5	1	-21.6030
chr17	49097242	49097279	protein_coding	Lrfn2	intron	ENSMUSG00000040490	NonProperStrand	9	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-11.1070
chr4	140756877	140756965	protein_coding	Fbxo42	utr3	ENSMUSG00000028920	ProperStrand	91	chr14	33005139	33005179	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-3.2246
chr12	101759078	101759095	Low_complexity	GC_rich	Low_complexity	chr12GC_rich101758901	ProperStrand	34	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.7115
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-5.9373
chr6	94776852	94776875	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	chr2	144087324	144087379	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-2.5808
chr7	13396911	13396929	protein_coding	Zfp329	exon	ENSMUSG00000057894	ProperStrand	6	chr3	123210854	123210933	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-6.4760
chr6	125060383	125063540	protein_coding	Chd4	exon	ENSMUSG00000063870	ProperStrand	303	chr4	131866155	131866249	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	3	-3.2797
chr15	61928447	61928537	lincRNA	Pvt1	intron	ENSMUSG00000072566	ProperStrand	51	chrX	34622929	34623009	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	5	-14.8371
chr1	136225761	136225778	protein_coding	Ppfia4	exon	ENSMUSG00000026458	ProperStrand	45	chr16	23111434	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	6	-11.2527
chr17	25146231	25146282	protein_coding	Cramp1l	intron	ENSMUSG00000038002	ProperStrand	22	chr1	162965531	162965548	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.1855
chr7	108440949	108440967	protein_coding	Atg16l2	intron	ENSMUSG00000047767	ProperStrand	121	chr9	40612851	40612905	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	1	-8.1405
chr11	106259948	106260009	protein_coding	Ern1	exon	ENSMUSG00000020715	ProperStrand	5	chr18	35714144	35714234	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-8.4504
chr6	113118507	113118525	protein_coding	Lhfpl4	utr3	ENSMUSG00000042873	ProperStrand	47	chr3	108357255	108357330	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-5.0110
chr2	164796661	164796679	protein_coding	Slc12a5	intron	ENSMUSG00000017740	NonProperStrand	40	chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	1	-13.3847
chr13	8756716	8766308	protein_coding	Adarb2	utr3	ENSMUSG00000052551	ProperStrand	292	chr5	115939503	115939584	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	6	-18.8099
chr5	129528284	129528333	protein_coding	Ran	exon	ENSMUSG00000029430	ProperStrand	82	chr11	89388976	89388992	protein_coding	Ankfn1	intron	ENSMUSG00000047773	ProperStrand	9	2	-20.2371
chr18	56708151	56708207	protein_coding	Aldh7a1	exon	ENSMUSG00000053644	ProperStrand	14	chr3	68889126	68889216	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-6.0690
chr11	102294589	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr2	158184092	158184195	snoRNA	ENSMUSG00000064995_SNORA71	.	ENSMUSG00000064995	ProperStrand	430	4	-15.5119
chr17	39979964	39980012	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr18	73693115	73693137	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	2	-1.1631
chr7	128002129	128002157	protein_coding	Eef2k	exon	ENSMUSG00000035064	ProperStrand	27	chr9	78215881	78215913	protein_coding	Dppa5a	utr5	ENSMUSG00000060461	ProperStrand	79	2	-inf
chrX	160863800	160863880	protein_coding-noncoding	Piga	utr5	ENSMUSG00000031381	ProperStrand	2	chr9	75393814	75393904	protein_coding	Tmod3	intron	ENSMUSG00000058587	ProperStrand	7	1	-inf
chr2	172377323	172377529	protein_coding	Tfap2c	exon	ENSMUSG00000028640	ProperStrand	13	chr1	162965999	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-6.5934
chr1	24621246	24621460	protein_coding	Gm10925	utr3	ENSMUSG00000090378	ProperStrand	320	chr18	35716763	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-1.6167
chr1	73927831	73927921	LTR	RMER16-int	ERVK	chr1RMER16-int73927663	NonProperStrand	1	chr19	4404302	4404392	SINE	B1_Mus1	Alu	chr19B1_Mus14404254	ProperStrand	1	1	-inf
chr10	5772250	5772340	LTR	ORR1E	MaLR	chr10ORR1E5772173	ProperStrand	1	chr10	5771959	5772039	LTR	RMER15	ERVL	chr10RMER155771806	ProperStrand	1	1	-inf
chr19	16854026	16854084	protein_coding	Vps13a	intron	ENSMUSG00000046230	ProperStrand	30	chr7	150717298	150717362	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-6.8791
chr17	23955386	23955467	protein_coding	Srrm2	utr3	ENSMUSG00000039218	ProperStrand	521	chr10	90581135	90581225	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-1.1203
chr9	66315773	66316864	protein_coding	Herc1	exon	ENSMUSG00000038664	ProperStrand	81	chr1	88252837	88252901	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-6.0477
chr17	39980010	39980100	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr11	120457238	120457294	protein_coding	Alyref	exon	ENSMUSG00000025134	ProperStrand	53	1	-7.4705
chr2	51940654	51944186	protein_coding	Rif1	exon	ENSMUSG00000036202	ProperStrand	201	chr14	52829478	52829568	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-5.8095
chr7	116078281	116078298	protein_coding	Eif3f	exon	ENSMUSG00000031029	NonProperStrand	20	chr10	23505151	23505217	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-5.2605
chr10	126502903	126502937	protein_coding-noncoding	Cdk4	utr5	ENSMUSG00000006728	ProperStrand	5	chr19	8963077	8963167	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-7.1260
chr3	104259722	104260550	protein_coding	Lrig2	utr3	ENSMUSG00000032913	ProperStrand	10	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-5.0079
chr4	131908990	131909040	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr13	104613417	104613433	protein_coding	Erbb2ip	exon	ENSMUSG00000021709	ProperStrand	21	1	-9.3744
chr11	54492452	54492470	protein_coding	Rapgef6	intron	ENSMUSG00000037533	ProperStrand	27	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	6	-19.3591
chr8	98269959	98270096	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	chr2	166890840	166890858	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	1	-2.8028
chr9	13560083	13560142	protein_coding	Mtmr2	intron	ENSMUSG00000031918	ProperStrand	22	chr10	23505204	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-7.4556
chrX	148436968	148437951	protein_coding	Hsd17b10	exon	ENSMUSG00000025260	ProperStrand	10	chr16	23110854	23110944	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-5.0079
chr17	83789518	83789606	protein_coding	Eml4	intron	ENSMUSG00000032624	ProperStrand	50	chr19	8800085	8800115	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	3	-17.6228
chr11	60530339	60530702	protein_coding	Flii	exon	ENSMUSG00000002812	ProperStrand	42	chr10	107988311	107988328	protein_coding	Syt1	intron	ENSMUSG00000035864	ProperStrand	11	1	-17.4626
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	62270322	62270339	protein_coding	Ncor1	intron	ENSMUSG00000018501	ProperStrand	132	1	-3.0029
chr1	52289622	52289643	protein_coding	Gls	exon	ENSMUSG00000026103	ProperStrand	56	chr17	24857806	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.4132
chr13	97050603	97050620	SINE	B4A	B4	chr13B4A97050317	ProperStrand	12	chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	1	-14.7175
chr11	100339641	100339704	protein_coding	Acly	exon	ENSMUSG00000020917	NonProperStrand	3	chr17	37146504	37146590	protein_coding	Zfp57	exon	ENSMUSG00000036036	NonProperStrand	1	1	-inf
chr14	31382199	31382221	protein_coding	Tkt	exon	ENSMUSG00000021957	ProperStrand	160	chr11	116533825	116533891	snoRNA	ENSMUSG00000065640_Snord1c	.	ENSMUSG00000065640	ProperStrand	373	1	-7.6935
chr15	79910959	79911358	protein_coding	Rpl3	exon	ENSMUSG00000060036	ProperStrand	8342	chr3	90016651	90016874	protein_coding	Rps27	exon	ENSMUSG00000090733	ProperStrand	40	2	-7.2808
chr3	142351261	142351281	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	3	-2.3192
chr13	52683821	52683840	protein_coding	Syk	intron	ENSMUSG00000021457	ProperStrand	20	chr16	23111374	23111423	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.0472
chr9	30800739	30800755	LTR	LTR78	ERV1	chr9LTR7830800462	ProperStrand	1	chrX	99380390	99380436	protein_coding	Rps4x	exon	ENSMUSG00000031320	ProperStrand	139	1	-inf
chr7	52661677	52661693	protein_coding	Kcna7	utr5	ENSMUSG00000038201	ProperStrand	10	chr8	64017612	64028375	protein_coding	Palld	exon	ENSMUSG00000058056	NonProperStrand	125	1	-15.4864
chr11	119764909	119764987	LINE	L1M4	L1	chr11L1M4119764719	ProperStrand	2	chr16	23111386	23111448	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-8.0851
chr5	34694204	34694277	protein_coding	Rnf4	utr3	ENSMUSG00000029110	ProperStrand	27	chr2	18508668	18508716	tRNA	tRNA1947-AsnGTT	.	1405088	ProperStrand	179	1	-12.7356
chr9	88448070	88448170	misc_RNA	CT025673.1	.	ENSMUSG00000092805	ProperStrand	24	chr16	23111435	23111499	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.7195
chr6	83146035	83146051	protein_coding	Dctn1	exon	ENSMUSG00000031865	ProperStrand	17	chr11	115935746	115937022	protein_coding	Unc13d	exon	ENSMUSG00000057948	ProperStrand	89	1	-15.0969
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr10	123167260	123167276	protein_coding	Fam19a2	intron	ENSMUSG00000044071	ProperStrand	9	1	-9.7556
chr13	103895241	103895257	protein_coding	Mast4	intron	ENSMUSG00000034751	ProperStrand	150	chr9	50816824	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	1	-9.9694
chr1	165871252	165871342	protein_coding	Scyl3	exon	ENSMUSG00000026584	ProperStrand	24	chr7	51505821	51505901	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	1	-10.4657
chr4	128900033	128900085	protein_coding	C77080	exon	ENSMUSG00000050390	ProperStrand	48	chr12	55835615	55835705	snRNA	ENSMUSG00000075960_U1	.	ENSMUSG00000075960	ProperStrand	210	1	-11.2503
chr15	76911504	76911594	protein_coding	Rbfox2	utr3	ENSMUSG00000033565	ProperStrand	55	chr2	130101240	130101310	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-6.7637
chr2	63936035	63936053	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr4	122970410	122970500	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-2.2723
chr11	12158326	12158349	protein_coding	Cobl	intron	ENSMUSG00000020173	ProperStrand	133	chr18	35716764	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.0011
chr6	148284213	148284231	protein_coding	Tmtc1	exon	ENSMUSG00000030306	ProperStrand	7	chr7	116664794	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-6.7161
chrX	107396011	107396027	LTR	RMER17A	ERVK	chrXRMER17A107395334	NonProperStrand	27	chr7	28146782	28146798	protein_coding	Spnb4	exon	ENSMUSG00000011751	NonProperStrand	84	1	-14.2622
chr4	43505816	43505906	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr4	82970142	82970160	protein_coding	Ttc39b	utr5	ENSMUSG00000038172	NonProperStrand	12	1	-6.1793
chrX	69515827	69515845	protein_coding	Gabre	exon	ENSMUSG00000031340	NonProperStrand	3	chr10	75322262	75322466	protein_coding	Mif	exon	ENSMUSG00000033307	ProperStrand	146	1	-18.0536
chr11	20991484	20991501	protein_coding	Peli1	utr5	ENSMUSG00000020134	ProperStrand	69	chr4	131908723	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-2.0530
chr4	131865966	131865988	lincRNA	Snhg12	exon	ENSMUSG00000086290	ProperStrand	178	chr12	106269339	106269439	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-2.1973
chr19	53464907	53464997	protein_coding	Smndc1	utr5	ENSMUSG00000025024	ProperStrand	2	chr7	152118581	152118597	protein_coding	Ccnd1	exon	ENSMUSG00000070348	ProperStrand	93	1	-20.0851
chr2	166678852	166680452	protein_coding	Arfgef2	exon	ENSMUSG00000074582	ProperStrand	32	chr4	131908811	131908891	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.1812
chr17	46814084	46814100	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr11	68717878	68717902	protein_coding	Rpl26	exon	ENSMUSG00000060938	ProperStrand	130	1	-7.6861
chrX	148707687	148707746	protein_coding	Kdm5c	utr3	ENSMUSG00000025332	ProperStrand	139	chr11	98878346	98878371	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-4.6495
chr5	108336391	108336495	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	chr16	43886791	43886925	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	2	-1.3331
chr10	70941049	70941066	LINE	Lx8	L1	chr10Lx870940642	NonProperStrand	1	chr9	53664642	53664742	protein_coding	Slc35f2	exon	ENSMUSG00000042195	ProperStrand	65	1	-inf
chr17	45705981	45706194	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr19	46108634	46108913	protein_coding	Ldb1	exon	ENSMUSG00000025223	ProperStrand	42	1	-7.4406
chr10	76515309	76515349	protein_coding	Col18a1	utr3	ENSMUSG00000001435	ProperStrand	287	chr16	45620182	45620198	protein_coding	Gcet2	exon	ENSMUSG00000022659	NonProperStrand	39	1	-11.0446
chr13	13602568	13602674	protein_coding	Nid1	utr3	ENSMUSG00000005397	ProperStrand	112	chr7	29136553	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	4	-5.8395
chr8	95713378	95713395	protein_coding	Ces1d	exon	ENSMUSG00000056973	NonProperStrand	2	chr19	8963027	8963085	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-9.4105
chr11	69493818	69493918	protein_coding	Senp3	utr5	ENSMUSG00000005204	ProperStrand	65	chr5	65952377	65952395	protein_coding	Ube2k	intron	ENSMUSG00000029203	ProperStrand	289	2	-15.7647
chr19	8799021	8799083	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	chr7	52381762	52381799	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-0.8952
chr9	44216901	44218039	protein_coding	Rps25	exon	ENSMUSG00000009927	ProperStrand	42	chr8	36529522	36529538	protein_coding	Eri1	utr3	ENSMUSG00000031527	NonProperStrand	97	1	-13.0713
chr18	13142843	13143761	protein_coding	Impact	exon	ENSMUSG00000024423	ProperStrand	32	chr19	8799829	8799882	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	5	-19.3228
chr11	95432109	95432163	protein_coding	Ngfr	utr3	ENSMUSG00000000120	ProperStrand	31	chr1	162965530	162965588	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.5161
chr8	87368485	87368575	protein_coding	Calr	exon	ENSMUSG00000003814	ProperStrand	232	chr3	108357341	108357421	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-2.1094
chr1	137641844	137641877	protein_coding	Csrp1	exon	ENSMUSG00000026421	ProperStrand	9	chr7	38354919	38354935	protein_coding	Zfp536	exon	ENSMUSG00000043456	NonProperStrand	236	1	-14.4491
chr6	48581785	48581820	lincRNA	AI854703	exon	ENSMUSG00000053297	ProperStrand	11	chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	3	-inf
chr5	150006002	150010222	protein_coding	Uspl1	exon	ENSMUSG00000041264	ProperStrand	20	chr2	158185608	158185666	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-8.6925
chr7	86823948	86824014	protein_coding	5730590G19Rik	exon	ENSMUSG00000046591	ProperStrand	45	chr4	131908689	131908719	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.6382
chr8	113447138	113447169	protein_coding	St3gal2	intron	ENSMUSG00000031749	ProperStrand	206	chr2	26494708	26494808	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.1385
chr7	13615080	13615109	protein_coding	Trim28	exon	ENSMUSG00000005566	ProperStrand	296	chr3	88787051	88787067	protein_coding	Ash1l	exon	ENSMUSG00000028053	NonProperStrand	50	1	-10.4815
chr3	94579423	94579488	protein_coding-noncoding	Cgn	utr3	ENSMUSG00000068876	ProperStrand	1	chr4	131908794	131908884	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-inf
chr8	13416895	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr19	8799829	8799898	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	17	-15.5978
chr2	120332804	120332894	protein_coding	Zfp106	utr3	ENSMUSG00000027288	ProperStrand	199	chr18	33954844	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	3	-4.3508
chr17	33975180	33975215	protein_coding	Ndufa7	utr3	ENSMUSG00000041881	ProperStrand	64	chr11	62416618	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-8.3080
chr1	138285121	138285211	Other	RMER1B	Other	chr1RMER1B138285139	ProperStrand	1	chr6	85450037	85450117	protein_coding	Fbxo41	intron	ENSMUSG00000047013	NonProperStrand	2	1	-inf
chr8	72287172	72287188	protein_coding	Zfp866	utr3	ENSMUSG00000043090	NonProperStrand	134	chr17	24857721	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-2.1288
chr14	35577335	35577432	lincRNA	A930038B10Rik	intron	ENSMUSG00000085825	ProperStrand	2	chr5	98882936	98882953	protein_coding	1700007G11Rik	intron	ENSMUSG00000057816	NonProperStrand	8	1	-19.9311
chr16	23110478	23110578	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	chr11	98572310	98572360	snoRNA	ENSMUSG00000088169_SNORD124	.	ENSMUSG00000088169	ProperStrand	62	1	-2.4059
chr16	89413455	89413482	LTR	RLTR6_Mm	ERV1	chr16RLTR6_Mm89412896	NonProperStrand	2	chr17	23955820	23955837	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	1	-19.9513
chr16	18815426	18818002	protein_coding	Ufd1l	exon	ENSMUSG00000005262	ProperStrand	3	chr9	118809445	118809461	protein_coding	Itga9	utr3	ENSMUSG00000039115	ProperStrand	27	1	-21.2276
chr19	8799041	8799091	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	chr3	68889026	68889245	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	26	-7.4809
chr2	25563070	25563086	antisense	A230005M16Rik	.	ENSMUSG00000087612	ProperStrand	103	chr9	120037933	120037954	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	2	-6.2341
chr10	80618487	80618625	protein_coding	Pias4	exon	ENSMUSG00000004934	ProperStrand	43	chr7	148634773	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-4.6204
chr2	130851907	130852018	protein_coding	Atrn	utr3	ENSMUSG00000027312	ProperStrand	16	chr15	79908958	79908984	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	4	-20.7378
chr1	181476981	181476997	protein_coding	Cnst	intron	ENSMUSG00000038949	ProperStrand	40	chr19	8963074	8963164	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.9778
chr2	18002264	18002296	protein_coding	Mllt10	intron	ENSMUSG00000026743	ProperStrand	30	chr5	108336363	108336492	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-6.2415
chr9	75448584	75448602	protein_coding	Tmod2	intron	ENSMUSG00000032186	NonProperStrand	2	chr12	55797771	55797870	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	1	-15.1668
chr9	123028378	123036948	protein_coding	Exosc7	exon	ENSMUSG00000025785	ProperStrand	17	chr3	108357255	108357303	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	7	-20.5766
chr2	130977089	130977179	protein_coding	1700037H04Rik	intron	ENSMUSG00000027327	ProperStrand	18	chr6	85418107	85418187	protein_coding	Cct7	exon	ENSMUSG00000030007	ProperStrand	173	6	-inf
chr4	124796957	124796973	protein_coding	Zc3h12a	exon	ENSMUSG00000042677	ProperStrand	37	chr15	79913288	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.5050
chr4	149611349	149611385	protein_coding	Eno1	utr5	ENSMUSG00000063524	ProperStrand	432	chr14	33005140	33005238	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	3	-2.7488
chr5	30581447	30581537	protein_coding	Ept1	intron	ENSMUSG00000075703	ProperStrand	18	chr7	29136544	29136624	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.5789
chr7	37384310	37384327	LTR	ORR1E	MaLR	chr7ORR1E37384234	NonProperStrand	30	chr8	32260372	32260424	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-5.9845
chr1	152268927	152269668	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	chr6	115758042	115758120	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-1.5449
chr16	5015457	5015572	protein_coding	Glyr1	utr3	ENSMUSG00000022536	ProperStrand	60	chr15	79913288	79913334	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-3.5922
chr16	21568106	21568122	protein_coding	Vps8	exon	ENSMUSG00000033653	NonProperStrand	14	chr2	26494775	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.9058
chr3	94167314	94167330	protein_coding	C2cd4d	utr5	ENSMUSG00000091648	ProperStrand	30	chr2	158182180	158182292	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-6.3656
chr3	137528531	137528572	protein_coding	H2afz	exon	ENSMUSG00000037894	ProperStrand	72	chr7	29136576	29136651	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-3.7195
chr7	13516148	13516210	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr4	131908689	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	12	-1.1623
chr5	97428547	97428563	protein_coding	Bmp2k	intron	ENSMUSG00000034663	ProperStrand	4	chr4	131908356	131908453	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-6.5415
chr11	99885311	99885327	protein_coding	Krt33b	exon	ENSMUSG00000057723	NonProperStrand	352	chr2	32818815	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	5	-10.5773
chr14	76162410	76162436	protein_coding	Slc25a30	utr3	ENSMUSG00000022003	ProperStrand	6	chr12	106269284	106269384	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-8.7970
chr10	9571817	9571915	snoRNA	ENSMUSG00000064609_SNORA36	.	ENSMUSG00000064609	ProperStrand	35	chr5	130300419	130300445	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-5.9353
chr14	79004195	79004299	protein_coding	Dgkh	exon	ENSMUSG00000034731	ProperStrand	29	chr11	77996557	77996589	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	6	-20.6051
chr16	20297753	20298241	protein_coding	Parl	exon	ENSMUSG00000033918	ProperStrand	19	chr7	52381972	52382009	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-9.0261
chrX	148343378	148343428	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	chr5	116174721	116174738	protein_coding	Ccdc64	exon	ENSMUSG00000041609	ProperStrand	51	1	-9.3914
chr2	32818866	32818966	protein_coding-noncoding	Rpl12	utr5	ENSMUSG00000038900	ProperStrand	68	chr7	148634787	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-3.7519
chr2	22445631	22445655	pseudogene	Gm13339	.	ENSMUSG00000082884	ProperStrand	24	chr9	120037943	120038050	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-6.5078
chr2	129998657	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr16	98168829	98168846	protein_coding	Zfp295	utr3	ENSMUSG00000046962	ProperStrand	63	2	-12.7905
chr5	141090405	141090422	protein_coding	Lfng	exon	ENSMUSG00000029570	NonProperStrand	92	chr17	27559700	27559717	protein_coding	Grm4	utr3	ENSMUSG00000063239	ProperStrand	147	1	-10.6558
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr10	80883489	80893572	protein_coding	Nfic	exon	ENSMUSG00000055053	ProperStrand	69	1	-6.6473
chr11	96680251	96689416	protein_coding	Nfe2l1	utr5	ENSMUSG00000038615	ProperStrand	118	chr16	23110960	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	8	-2.9081
chr11	113523870	113523887	protein_coding	Cog1	utr3	ENSMUSG00000018661	ProperStrand	51	chr7	51505224	51505308	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	2	-13.4912
chr6	124666663	124666753	protein_coding	Phb2	utr3	ENSMUSG00000004264	ProperStrand	43	chr19	8963093	8963173	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.8490
chr16	18247431	18247466	protein_coding	Ranbp1	exon	ENSMUSG00000005732	ProperStrand	22	chr16	23110455	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-10.4846
chr5	54389947	54389967	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	chr4	131908236	131908407	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	7	-3.9355
chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	chr11	106362639	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-4.0254
chr17	57161583	57161637	protein_coding	Khsrp	utr3	ENSMUSG00000007670	ProperStrand	353	chr10	80674669	80675224	protein_coding	Atcay	exon	ENSMUSG00000034958	ProperStrand	94	1	-8.8631
chr9	65049533	65049623	snRNA	ENSMUSG00000075930_U5	.	ENSMUSG00000075930	ProperStrand	175	chr6	125136469	125136550	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	6	-18.5638
chr1	183834724	183849739	protein_coding	Enah	exon	ENSMUSG00000022995	ProperStrand	196	chr7	29136526	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	10	-13.5327
chr1	55143717	55144644	protein_coding	Hspd1	utr5	ENSMUSG00000025980	ProperStrand	140	chr4	116875172	116875248	snRNA	ENSMUSG00000070228_U5	.	ENSMUSG00000070228	ProperStrand	131	1	-10.0452
chr7	129913285	129913375	SINE	ID_B1	B4	chr7ID_B1129913271	NonProperStrand	1	chr7	129913168	129913248	SINE	MIRb	MIR	chr7MIRb129913126	ProperStrand	1	1	-inf
chr9	30968875	31019267	protein_coding	Aplp2	exon	ENSMUSG00000031996	ProperStrand	172	chr7	118219575	118219665	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-4.0527
chr15	77356785	77356801	protein_coding	Apol7c	exon	ENSMUSG00000044309	ProperStrand	197	chrX	84483692	84483720	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-5.8947
chr5	30396619	30396668	protein_coding-noncoding	Tyms	utr3	ENSMUSG00000025747	ProperStrand	1	chr17	24857740	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-inf
chr3	54916298	54916314	protein_coding	Spg20	utr5	ENSMUSG00000036580	NonProperStrand	3	chr4	131865380	131865452	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	3	-inf
chr11	97641535	97643694	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	chr11	97642948	97643090	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	28	-21.4251
chr9	78327186	78327222	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr2	158185529	158185652	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	7	-7.2185
chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	chr10	30530982	30531020	tRNA	tRNA81-GluCTC	.	1768065	ProperStrand	154	1	-6.6300
chr6	87863893	87863910	lincRNA	Gm16723	intron	ENSMUSG00000085703	ProperStrand	13	chr7	117189901	117189991	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-10.3145
chr17	24858078	24858580	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr9	15118325	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	7	-7.8639
chr5	135857995	135858011	protein_coding	Pom121	exon	ENSMUSG00000053293	NonProperStrand	94	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.1229
chr16	57391633	57391695	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr1	39605592	39605661	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	NonProperStrand	4	1	-15.9781
chr8	77742558	77742574	protein_coding	Rasd2	exon	ENSMUSG00000034472	NonProperStrand	237	chr2	26494782	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-0.9606
chr2	120872244	120872260	protein_coding	Tgm5	exon	ENSMUSG00000053675	NonProperStrand	163	chr18	73693168	73693189	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-3.6193
chr19	44472599	44474638	protein_coding	Scd1	exon	ENSMUSG00000037071	NonProperStrand	3	chr2	26493392	26493492	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-16.6513
chr1	133459620	133459710	LTR	ORR1A3	MaLR	chr1ORR1A3133459391	NonProperStrand	1	chr1	133459740	133459820	LTR	ORR1D1	MaLR	chr1ORR1D1133459725	NonProperStrand	1	1	-inf
chr17	56850858	56850904	protein_coding	Ranbp3	utr3	ENSMUSG00000002372	ProperStrand	34	chr9	108594650	108594669	protein_coding	Prkar2a	utr5	ENSMUSG00000032601	ProperStrand	43	1	-15.1312
chr13	74476580	74477040	protein_coding	Sdha	exon	ENSMUSG00000021577	ProperStrand	70	chr16	23111454	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-3.3555
chr8	74446729	74446745	protein_coding	Zfp617	intron	ENSMUSG00000066880	NonProperStrand	208	chr16	43886794	43886850	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	1	-5.6184
chr1	173341933	173341949	protein_coding	Usf1	utr5	ENSMUSG00000026641	NonProperStrand	144	chr2	25864716	25864768	protein_coding	Ubac1	exon	ENSMUSG00000036352	ProperStrand	25	1	-13.3262
chr12	79910910	79910927	protein_coding	Mpp5	exon	ENSMUSG00000021112	NonProperStrand	26	chr7	118219593	118219643	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-5.7950
chr9	30957606	30957646	protein_coding	Aplp2	utr3	ENSMUSG00000031996	ProperStrand	172	chr12	17552949	17553061	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-3.1139
chr11	97372833	97372849	protein_coding	Srcin1	utr3	ENSMUSG00000038453	NonProperStrand	21	chr11	69483188	69483278	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-7.3452
chr9	21823257	21823273	protein_coding	Elavl3	exon	ENSMUSG00000003410	NonProperStrand	137	chr8	71418627	71419630	protein_coding	Lpl	exon	ENSMUSG00000015568	ProperStrand	11	1	-15.1345
chr18	61715243	61715309	protein_coding	Csnk1a1	utr5	ENSMUSG00000024576	ProperStrand	64	chr19	44188461	44188551	snoRNA	ENSMUSG00000077391_SNORA12	.	ENSMUSG00000077391	ProperStrand	506	1	-8.9156
chr16	33234686	33236351	protein_coding	Osbpl11	exon	ENSMUSG00000022807	ProperStrand	31	chr2	158182245	158182293	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-6.3003
chr12	60141318	60141408	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	NonProperStrand	2	chr10	23505199	23505279	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	NonProperStrand	45	1	-19.7664
chr17	29104611	29104691	protein_coding	Kctd20	utr3	ENSMUSG00000005936	ProperStrand	21	chr9	120039591	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-5.3228
chr17	39985663	39985763	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr19	17900099	17900117	snoRNA	ENSMUSG00000089540_snoU13	.	ENSMUSG00000089540	ProperStrand	99	5	-19.7487
chr2	26323806	26323855	protein_coding	Notch1	exon	ENSMUSG00000026923	ProperStrand	145	chr17	30399195	30399259	protein_coding	Btbd9	intron	ENSMUSG00000062202	ProperStrand	31	1	-12.8757
chr14	32390433	32390451	protein_coding	Colq	utr5	ENSMUSG00000057606	NonProperStrand	4	chr5	121655127	121655153	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-9.2889
chr1	20552542	20552558	protein_coding	Pkhd1	exon	ENSMUSG00000043760	NonProperStrand	49	chr17	25996060	25996076	protein_coding	Wdr90	exon	ENSMUSG00000073434	ProperStrand	91	1	-12.8867
chr11	50112657	50112699	protein_coding	Canx	exon	ENSMUSG00000020368	ProperStrand	296	chr4	116793046	116793063	protein_coding	Btbd19	utr3	ENSMUSG00000073771	NonProperStrand	4	1	-15.7776
chr9	110844940	110845125	protein_coding	Tdgf1	exon	ENSMUSG00000032494	ProperStrand	218	chr1	172975125	172975189	tRNA	tRNA699-GlyGCC	.	269468	ProperStrand	660	1	-5.9592
chr18	34788820	34788920	protein_coding	Kif20a	exon	ENSMUSG00000003779	ProperStrand	50	chr15	7128989	7131883	protein_coding	Lifr	exon	ENSMUSG00000054263	ProperStrand	64	1	-13.5514
chr10	77453519	77453536	protein_coding	Pfkl	exon	ENSMUSG00000020277	ProperStrand	179	chr5	35434488	35434540	protein_coding	Lrpap1	utr3	ENSMUSG00000029103	ProperStrand	43	1	-11.7927
chr2	51012573	51012632	LTR	MTEa	MaLR	chr2MTEa51012552	ProperStrand	1	chr4	43505817	43505907	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	1	-inf
chr4	155122854	155122937	protein_coding	Atad3a	intron	ENSMUSG00000029036	ProperStrand	28	chr11	83084997	83085087	snRNA	ENSMUSG00000064856_U2	.	ENSMUSG00000064856	ProperStrand	34	1	-15.9578
chr4	122972253	122972454	protein_coding	Pabpc4	exon	ENSMUSG00000011257	ProperStrand	85	chr11	60445052	60445142	pseudogene	Gm12626	.	ENSMUSG00000081753	ProperStrand	1	1	-inf
chr19	56003755	56003771	protein_coding	Tcf7l2	intron	ENSMUSG00000024985	ProperStrand	103	chr9	15119631	15119657	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.7420
chr4	136108499	136109775	protein_coding	Kdm1a	exon	ENSMUSG00000036940	ProperStrand	83	chr11	69481383	69481473	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-2.6259
chr6	122679764	122679849	protein_coding	Slc2a3	utr3	ENSMUSG00000003153	NonProperStrand	4	chr2	73705989	73706076	protein_coding	Atf2	intron	ENSMUSG00000027104	ProperStrand	37	1	-18.9447
chr7	29171540	29171558	protein_coding	Med29	utr3	ENSMUSG00000003444	NonProperStrand	134	chr16	23111764	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-2.6939
chr3	85448965	85456213	protein_coding	Pet112l	exon	ENSMUSG00000028085	ProperStrand	81	chr2	166890783	166890831	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	1	-9.7787
chr4	81748400	81748420	lincRNA	Gm5860	exon	ENSMUSG00000085022	ProperStrand	9	chr4	41067798	41067814	protein_coding	Nol6	exon	ENSMUSG00000028430	ProperStrand	98	1	-16.1849
chr15	76736593	76736692	protein_coding	Rpl8	exon	ENSMUSG00000003970	ProperStrand	191	chr8	125741087	125741105	protein_coding	4732415M23Rik	intron	ENSMUSG00000048478	ProperStrand	88	1	-10.2210
chr7	152118581	152118597	protein_coding	Ccnd1	exon	ENSMUSG00000070348	ProperStrand	93	chr17	35089182	35089228	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-4.6370
chr1	54361817	54371000	protein_coding	Ccdc150	exon	ENSMUSG00000025983	ProperStrand	56	chr2	112134179	112134229	protein_coding	Slc12a6	intron	ENSMUSG00000027130	ProperStrand	35	1	-14.5430
chr2	145076803	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	chr9	15119631	15119736	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	7	-0.8335
chr17	35295075	35295340	protein_coding	Prrc2a	exon	ENSMUSG00000024393	ProperStrand	315	chr7	127813822	127813839	protein_coding	Pdzd9	utr5	ENSMUSG00000030887	ProperStrand	7	1	-14.4212
chr7	112891841	112892345	protein_coding	Taf10	exon	ENSMUSG00000043866	ProperStrand	14	chr11	69483136	69483226	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-5.1730
chr7	97592002	97592092	protein_coding	Crebzf	exon	ENSMUSG00000051451	ProperStrand	24	chr14	65372785	65372864	snoRNA	ENSMUSG00000064442_SNORA36	.	ENSMUSG00000064442	ProperStrand	296	1	-11.9692
chr11	80080114	80080131	protein_coding	Rhot1	utr3	ENSMUSG00000017686	NonProperStrand	48	chr13	113296502	113296531	protein_coding	Il6st	utr3	ENSMUSG00000021756	ProperStrand	34	1	-14.9001
chr8	87083463	87083480	protein_coding	Cacna1a	exon	ENSMUSG00000034656	NonProperStrand	37	chr18	77173207	77173229	protein_coding	Ier3ip1	intron	ENSMUSG00000090000	ProperStrand	7	1	-18.4270
chr6	142439080	142439096	protein_coding	Ldhb	exon	ENSMUSG00000030246	NonProperStrand	63	chr6	148303937	148303974	protein_coding	Rps4y2	exon	ENSMUSG00000063171	ProperStrand	47	1	-13.7116
chr18	61315027	61317017	protein_coding	Hmgxb3	exon	ENSMUSG00000024622	ProperStrand	25	chr7	116663669	116663759	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	12	-20.4071
chr11	6428033	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr5	74489543	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	48	-2.3210
chr4	130305566	130305619	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	chr2	130103755	130103825	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-5.1219
chr3	87673885	87673955	protein_coding	Prcc	exon	ENSMUSG00000004895	ProperStrand	38	chr18	73693122	73693148	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	2	-10.4157
chr1	120355715	120355798	snRNA	ENSMUSG00000080542_U4atac	.	ENSMUSG00000080542	ProperStrand	73	chr18	35716814	35716883	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	5	-9.4499
chr17	35299507	35299642	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	chr18	35714143	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	32	-4.9499
chr1	56928479	56928560	protein_coding	Satb2	exon	ENSMUSG00000038331	ProperStrand	5	chr5	74489618	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-8.8134
chr11	68936358	68936374	protein_coding	Hes7	exon	ENSMUSG00000023781	NonProperStrand	66	chr19	8963105	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.1173
chr9	59526537	59526600	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chrX	91449290	91449306	protein_coding	Eif2s3x	exon	ENSMUSG00000035150	NonProperStrand	83	1	-6.5350
chr16	4043985	4044026	protein_coding	Trap1	exon	ENSMUSG00000005981	ProperStrand	25	chr16	23110915	23110957	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.2939
chr11	115200753	115200770	protein_coding	Otop3	exon	ENSMUSG00000018862	ProperStrand	59	chr7	134671399	134671504	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-7.9054
chr13	113294105	113294185	protein_coding	Il6st	exon	ENSMUSG00000021756	ProperStrand	34	chr11	6428077	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-10.3178
chrX	111337634	111337654	LTR	LTRIS5	ERV1	chrXLTRIS5111337413	NonProperStrand	5	chr11	69481434	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-13.4175
chr4	126541085	126541175	protein_coding	Zmym4	utr3	ENSMUSG00000042446	ProperStrand	94	chr9	120039545	120039625	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.5240
chr4	13404842	13404861	LTR	MTE2a	MaLR	chr4MTE2a13404626	ProperStrand	1	chr16	57391626	57391677	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	1	-inf
chr17	24857696	24857730	protein_coding-noncoding	Rps2	utr5	ENSMUSG00000044533	ProperStrand	29	chr7	29136526	29136616	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-9.1326
chr1	33514936	33515018	protein_coding	Prim2	intron	ENSMUSG00000026134	ProperStrand	42	chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	1	-9.4801
chr10	126954111	126954143	protein_coding	Ndufa4l2	utr3	ENSMUSG00000040280	ProperStrand	18	chr11	58809803	58810353	protein_coding	Obscn	exon	ENSMUSG00000061462	ProperStrand	81	1	-15.1470
chr8	49428668	49428760	protein_coding	Odz3	exon	ENSMUSG00000031561	ProperStrand	56	chr8	93545690	93545715	protein_coding	Chd9	exon	ENSMUSG00000056608	ProperStrand	35	4	-21.2105
chr15	83223086	83232320	protein_coding	Pacsin2	exon	ENSMUSG00000016664	ProperStrand	30	chr2	158185593	158185656	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	3	-17.6833
chr7	109012606	109016925	protein_coding	Folr1	utr5	ENSMUSG00000001827	ProperStrand	12	chr1	162968463	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-9.3310
chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	chr1	102076755	102239858	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	2	-7.2666
chr6	88429223	88432152	protein_coding	Ruvbl1	exon	ENSMUSG00000030079	NonProperStrand	54	chr5	116872730	116872759	protein_coding	Hspb8	utr5	ENSMUSG00000041548	NonProperStrand	7	6	-inf
chr17	25570035	25570051	protein_coding	Cacna1h	exon	ENSMUSG00000024112	NonProperStrand	3	chr11	69483136	69483193	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-8.5256
chr5	143105646	143105736	protein_coding	Wipi2	utr5	ENSMUSG00000029578	ProperStrand	49	chr4	131865391	131865471	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-4.3863
chr15	81110991	81111009	SINE	ID4	ID	chr15ID481110956	ProperStrand	272	chr11	68886975	68887039	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-1.5377
chr18	73693109	73693188	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr2	26494707	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	39	-13.7697
chr5	64306691	64306791	protein_coding	Rell1	intron	ENSMUSG00000047881	ProperStrand	24	chr18	35714217	35714291	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-5.1913
chr5	74489219	74489330	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr7	106628496	106628529	protein_coding	Rps3	exon	ENSMUSG00000030744	ProperStrand	159	1	-3.7580
chr6	108786745	108786761	protein_coding	Edem1	exon	ENSMUSG00000030104	ProperStrand	18	chr2	32818882	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-7.8747
chr1	98080885	98080901	LINE	Lx	L1	chr1Lx98080668	ProperStrand	6	chr7	117189863	117189923	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-10.9406
chr4	137865330	137865556	protein_coding	Ddost	exon	ENSMUSG00000028757	ProperStrand	49	chr5	54389950	54389966	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	1	-11.1898
chr1	171622601	171622619	protein_coding	Rgs5	utr3	ENSMUSG00000026678	ProperStrand	6	chr4	116230385	116230401	protein_coding	Gpbp1l1	utr5	ENSMUSG00000034042	NonProperStrand	106	1	-16.8192
chr5	74489203	74489609	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr9	15118245	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	14	-1.0811
chr7	28146782	28146798	protein_coding	Spnb4	exon	ENSMUSG00000011751	NonProperStrand	84	chr18	82662186	82662202	protein_coding	Mbp	intron	ENSMUSG00000041607	NonProperStrand	185	1	-10.3783
chr11	75259170	75259226	protein_coding	Wdr81	exon	ENSMUSG00000045374	ProperStrand	6	chr16	23110524	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-6.9463
chr1	180267549	180267607	protein_coding	Hnrnpu	exon	ENSMUSG00000039630	ProperStrand	286	chr5	131315880	131315896	protein_coding	Caln1	utr3	ENSMUSG00000060371	NonProperStrand	15	1	-13.0044
chr4	147429907	147429972	protein_coding	Mthfr	utr3	ENSMUSG00000029009	ProperStrand	19	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-3.1937
chr6	97112905	97112941	snoRNA	ENSMUSG00000065728_SNORA36	.	ENSMUSG00000065728	ProperStrand	158	chr17	24857720	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	3	-2.9163
chr7	86278916	86290238	protein_coding	Mfge8	exon	ENSMUSG00000030605	ProperStrand	73	chr16	23110940	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	8	-5.8110
chr14	100422034	100422056	protein_coding	Klf12	exon	ENSMUSG00000072294	ProperStrand	14	chr5	108336364	108336495	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	6	-inf
chr2	26767737	26767815	protein_coding-noncoding	Rpl7a	utr5	ENSMUSG00000062647	ProperStrand	53	chr11	69483136	69483195	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-4.6700
chr11	100643054	100643108	protein_coding	Stat5b	utr3	ENSMUSG00000020919	ProperStrand	7	chr3	68889133	68889223	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-7.5114
chr5	130050943	130050986	protein_coding	Sfswap	intron	ENSMUSG00000029439	ProperStrand	34	chr19	8798754	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-5.9114
chr4	43505843	43505923	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr11	69482184	69482598	protein_coding	Eif4a1	exon	ENSMUSG00000059796	ProperStrand	108	1	-2.0629
chr2	9985901	9985917	protein_coding	Atp5c1	exon	ENSMUSG00000025781	ProperStrand	138	chr6	100236575	100237257	protein_coding	Rybp	exon	ENSMUSG00000072872	ProperStrand	51	1	-11.9694
chr9	50406901	50407001	protein_coding	Sdhd	exon	ENSMUSG00000000171	ProperStrand	9	chr10	23505152	23505204	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.5477
chr11	95820138	95820155	protein_coding	Igf2bp1	utr3	ENSMUSG00000013415	ProperStrand	140	chr18	35714182	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	3	-5.4433
chr11	62416600	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	chr5	92485100	92485200	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	4	-5.2338
chr2	79132657	79132674	protein_coding-noncoding	Itga4	utr5	ENSMUSG00000027009	NonProperStrand	118	chr7	17018353	17018369	protein_coding	Zc3h4	exon	ENSMUSG00000059273	ProperStrand	95	1	-11.0316
chr9	21823257	21823273	protein_coding	Elavl3	exon	ENSMUSG00000003410	NonProperStrand	137	chr3	121995872	121995893	tRNA	tRNA628-ArgTCT	.	1923264	ProperStrand	7	1	-16.1257
chr4	107917633	107923137	protein_coding	Zyg11b	exon	ENSMUSG00000034636	ProperStrand	11	chr7	117190023	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	3	-15.4739
chr4	116827791	116827890	snoRNA	ENSMUSG00000064751_SNORD46	.	ENSMUSG00000064751	ProperStrand	132	chr16	23110828	23111000	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	7	-1.7329
chr5	39063638	39063685	protein_coding	Zfp518b	exon	ENSMUSG00000046572	ProperStrand	95	chr13	96100642	96100693	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	2	-11.4884
chr3	17826427	17826444	LINE	L1M4	L1	chr3L1M417826325	ProperStrand	6	chr18	35714217	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-8.0481
chr2	107560061	107560141	LINE	Lx2	L1	chr2Lx2107559727	ProperStrand	1	chr2	107560192	107560282	LINE	Lx2	L1	chr2Lx2107560117	ProperStrand	1	1	-inf
chr9	20693934	20693974	snoRNA	ENSMUSG00000077702_SNORD105	.	ENSMUSG00000077702	ProperStrand	41	chr1	162965980	162966041	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	3	-10.4387
chr5	32657192	32657208	protein_coding	Plb1	exon	ENSMUSG00000029134	ProperStrand	50	chr5	111105503	111105519	protein_coding	Ep400	exon	ENSMUSG00000029505	ProperStrand	176	1	-11.5216
chr6	141371857	141371877	protein_coding	Pde3a	intron	ENSMUSG00000041741	ProperStrand	9	chr16	32143380	32143397	protein_coding	Lrrc33	exon	ENSMUSG00000052384	ProperStrand	8	1	-18.7584
chr1	60039655	60039699	protein_coding	Fam117b	utr3	ENSMUSG00000041040	ProperStrand	31	chr17	24857766	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.4661
chrX	115443369	115443385	LINE	Lx3A	L1	chrXLx3A115443230	NonProperStrand	12	chr17	35088958	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-9.1155
chr16	21568106	21568122	protein_coding	Vps8	exon	ENSMUSG00000033653	NonProperStrand	14	chr4	131865855	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.3681
chr1	145596210	145596233	protein_coding	Glrx2	utr3	ENSMUSG00000018196	ProperStrand	1	chr16	23110930	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr1	95712955	95713013	protein_coding	Ing5	exon	ENSMUSG00000026283	ProperStrand	16	chr10	23506278	23506346	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-9.6167
chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	chr9	15069885	15069901	protein_coding	Med17	exon	ENSMUSG00000031935	ProperStrand	135	1	-7.6502
chr3	145171662	145171678	protein_coding	Col24a1	exon	ENSMUSG00000028197	ProperStrand	33	chr11	106362638	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-8.6034
chr18	36800002	36801303	protein_coding	Ankhd1	exon	ENSMUSG00000024483	ProperStrand	56	chr10	90581049	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-4.9405
chr16	16053597	16114997	protein_coding	2310008H04Rik	utr5	ENSMUSG00000041974	ProperStrand	30	chr6	71832606	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	2	-11.2708
chr2	152960278	152960296	protein_coding	Hck	intron	ENSMUSG00000003283	ProperStrand	8	chr16	23110828	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.2180
chr11	97889223	97891765	protein_coding	Rpl19	exon	ENSMUSG00000017404	ProperStrand	120	chr16	23111389	23111505	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	7	-6.6235
chr19	6368410	6371292	protein_coding	Sf1	exon	ENSMUSG00000024949	ProperStrand	251	chr3	84935851	84935868	protein_coding	Arfip1	intron	ENSMUSG00000074513	ProperStrand	49	1	-10.8520
chr9	21560329	21564615	protein_coding	Spc24	utr3	ENSMUSG00000074476	ProperStrand	19	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-3.1937
chr5	90718343	90718443	protein_coding	Ankrd17	exon	ENSMUSG00000055204	ProperStrand	77	chr9	15119630	15119970	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	12	-20.5378
chr7	125252705	125253489	protein_coding	Rps15a	exon	ENSMUSG00000008683	ProperStrand	28	chr11	97643000	97643091	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	4	-12.7708
mmu-miR-6239	0	18	miRNA	mmu-miR-6239	.	mmu-miR-6239	ProperStrand	31	chr18	35714144	35714220	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.6912
chr9	40611244	40611302	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-2.0951
chr2	120570233	120570278	protein_coding	Ttbk2	intron	ENSMUSG00000090100	ProperStrand	50	chr5	130300461	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	5	-12.7833
chr19	60857885	60857913	protein_coding	Eif3a	exon	ENSMUSG00000024991	ProperStrand	287	chr9	15118256	15118321	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	3	-3.1166
chr4	107240965	107240981	protein_coding	Glis1	exon	ENSMUSG00000034762	NonProperStrand	8	chr14	76247754	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-13.2791
chr7	117189955	117190044	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	chr12	110918156	110918176	snoRNA	ENSMUSG00000065749_AF357428	.	ENSMUSG00000065749	ProperStrand	218	1	-1.2299
chr19	8799829	8799897	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	chr12	110884367	110884411	snoRNA	ENSMUSG00000084691_SNORD113	.	ENSMUSG00000084691	ProperStrand	23	3	-15.6077
chr12	45013530	45013551	LINE	Lx8	L1	chr12Lx845013348	ProperStrand	2	chr16	23111757	23111811	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-8.9529
chr6	47738067	47738126	misc_RNA	Y_RNA	.	ENSMUSG00000065701	ProperStrand	129	chr17	24857716	24857808	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	4	-5.0723
chr11	61523030	61523049	protein_coding	Slc5a10	intron	ENSMUSG00000042371	ProperStrand	11	chr4	131908356	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.3989
chr17	75039424	75039620	protein_coding	Birc6	exon	ENSMUSG00000024073	ProperStrand	110	chr1	162965994	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-4.4344
chr5	74489203	74489293	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr3	54533158	54533177	protein_coding	Exosc8	exon	ENSMUSG00000027752	ProperStrand	8	1	-9.7175
chr2	9799233	9799251	antisense	Gm13256	.	ENSMUSG00000086618	ProperStrand	4	chr3	123210913	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-7.3786
chr5	152198645	152198661	lincRNA	1700028E10Rik	exon	ENSMUSG00000087548	ProperStrand	53	chr9	50816824	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	1	-12.0583
chr8	108734898	108734914	protein_coding	Prmt7	utr5	ENSMUSG00000060098	ProperStrand	43	chr4	131865940	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.3073
chr8	47296266	47296316	protein_coding	Slc25a4	utr5	ENSMUSG00000031633	ProperStrand	53	chr10	23505149	23505209	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.4069
chr15	98356822	98356913	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	chr5	111121066	111121191	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	24	-20.6631
chr1	120197606	120201782	protein_coding	Tsn	exon	ENSMUSG00000026374	ProperStrand	4	chr15	79913288	79913344	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-9.1208
chr17	4082107	4082207	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr9	15118563	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	1	-6.0248
chr9	34675011	34675030	protein_coding	Kirrel3	intron	ENSMUSG00000032036	ProperStrand	11	chr9	15119648	15119738	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.8656
chr5	73151604	73151620	protein_coding	Tec	exon	ENSMUSG00000029217	ProperStrand	3	chr17	24665451	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-11.2419
chrX	140752684	140752731	protein_coding	Alg13	intron	ENSMUSG00000041718	ProperStrand	45	chr16	23110454	23110527	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.9643
chr18	38488429	38488514	protein_coding	Gnpda1	utr3	ENSMUSG00000052102	ProperStrand	16	chr4	131866155	131866195	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-6.2370
chr7	26497769	26497793	protein_coding	Ccdc97	utr3	ENSMUSG00000002608	ProperStrand	10	chr11	69483136	69483271	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-5.8555
chr17	86119840	86119857	SINE	B3A	B2	chr17B3A86119758	NonProperStrand	18	chr11	84722945	84722961	protein_coding	Myo19	exon	ENSMUSG00000020527	ProperStrand	82	1	-15.1197
chr9	120039533	120039622	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	chr2	166890792	166890858	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	9	-13.8706
chr14	20858318	20858387	LTR	MT2A	ERVL	chr14MT2A20858248	NonProperStrand	3	chr16	23111742	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-inf
chr1	181027187	181027205	protein_coding	Smyd3	intron	ENSMUSG00000055067	ProperStrand	231	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	2	-8.3628
chr15	96063288	96063304	lincRNA	4833422M21Rik	exon	ENSMUSG00000085460	NonProperStrand	37	chr6	91634152	91634284	protein_coding	Slc6a6	utr5	ENSMUSG00000030096	ProperStrand	206	3	-19.9841
chr12	111931022	111931239	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr2	145077954	145209251	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-2.8821
chr10	127550663	127556389	protein_coding	Baz2a	exon	ENSMUSG00000040054	ProperStrand	274	chr7	29136525	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-0.8738
chr10	85406648	85406668	antisense	Ascl4	.	ENSMUSG00000085111	ProperStrand	1	chr16	11144101	11144203	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	1	-inf
chr4	122537024	122537074	protein_coding	Cap1	utr3	ENSMUSG00000028656	ProperStrand	45	chr18	35716814	35716836	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.6579
chr6	67222159	67222894	protein_coding	Serbp1	exon	ENSMUSG00000036371	ProperStrand	261	chr1	162968214	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-3.9691
chr2	11453247	11453304	SINE	B1_Mur2	Alu	chr2B1_Mur211453166	ProperStrand	1	chr11	69483190	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-inf
chr16	23110454	23110584	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	chr8	13876097	13876224	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	15	-2.5825
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr3	156224612	156224628	lincRNA	4930570G19Rik	exon	ENSMUSG00000085084	ProperStrand	326	2	-2.8344
chr6	115757992	115758049	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr18	74938047	74938074	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	ProperStrand	1022	1	-0.7277
chr4	45046646	45046695	protein_coding	Polr1e	intron	ENSMUSG00000028318	ProperStrand	6	chr4	123170494	123171189	protein_coding	Macf1	exon	ENSMUSG00000028649	ProperStrand	320	1	-14.7062
chr16	91270626	91270644	protein_coding	Olig1	exon	ENSMUSG00000046160	NonProperStrand	32	chr4	131865856	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.8186
chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr9	21451875	21490476	protein_coding	Smarca4	exon	ENSMUSG00000032187	ProperStrand	196	3	-10.0372
chr11	97639606	97643175	protein_coding	Rpl23	exon	ENSMUSG00000071415	ProperStrand	920	chr2	26494708	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	5	-0.8918
chr6	122680061	122681413	protein_coding	Slc2a3	exon	ENSMUSG00000003153	ProperStrand	682	chr11	77995188	77995228	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-1.7474
chr17	24857712	24857737	protein_coding-noncoding	Rps2	utr5	ENSMUSG00000044533	ProperStrand	29	chr16	23110913	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-3.5149
chr17	26230842	26230899	protein_coding	Nme4	exon	ENSMUSG00000024177	ProperStrand	9	chr16	23110911	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-5.3337
chr2	31423247	31423267	SINE	B4A	B4	chr2B4A31423163	NonProperStrand	1	chr8	98285650	98285697	protein_coding	Cnot1	intron	ENSMUSG00000036550	ProperStrand	315	1	-inf
chr7	106627790	106627825	protein_coding	Rps3	exon	ENSMUSG00000030744	ProperStrand	159	chr5	123872105	123872142	protein_coding	Mlxip	intron	ENSMUSG00000038342	ProperStrand	21	2	-19.3387
chr5	100858299	100858389	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr18	63238394	63238410	protein_coding	Fam38b	exon	ENSMUSG00000041482	NonProperStrand	50	1	-7.0001
chr2	104726552	104726632	protein_coding	Ccdc73	utr5	ENSMUSG00000045106	ProperStrand	13	chr19	8963024	8963114	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.1201
chr14	33153227	33153832	protein_coding	Ogdhl	exon	ENSMUSG00000021913	ProperStrand	182	chr17	35087931	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-3.1155
chr17	45802450	45802466	antisense	Gm16172	.	ENSMUSG00000086472	ProperStrand	17	chr14	69860184	69860216	protein_coding	Slc25a37	utr3	ENSMUSG00000034248	ProperStrand	37	1	-16.8572
chr4	134372205	134372295	protein_coding	Tmem57	intron	ENSMUSG00000028826	ProperStrand	16	chr4	131865857	131865937	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.1079
chr17	12789415	12789432	protein_coding	Slc22a2	intron	ENSMUSG00000040966	NonProperStrand	6	chr11	68886976	68887034	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-8.8009
chr8	107783510	107783527	protein_coding	Tradd	exon	ENSMUSG00000031887	ProperStrand	23	chr8	129468746	129468876	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	2	-10.2418
chr1	63225590	63225670	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	chr1	39605591	39605681	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-1.2936
chr2	25440865	25440955	protein_coding	B230208H17Rik	exon	ENSMUSG00000015087	ProperStrand	25	chr10	23505192	23505282	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.6150
chr5	77403830	77403856	protein_coding	Srp72	exon	ENSMUSG00000036323	ProperStrand	41	chr4	131865395	131865485	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-4.7287
chr11	120575514	120575532	protein_coding	Lrrc45	utr5	ENSMUSG00000025145	NonProperStrand	1	chr8	91555417	91555486	protein_coding	Sall1	exon	ENSMUSG00000031665	ProperStrand	96	1	-inf
chr10	104223097	104223114	LINE	Lx9	L1	chr10Lx9104222795	NonProperStrand	1	chr2	26494708	26494840	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-inf
chr16	62786510	62786528	protein_coding	Nsun3	utr5	ENSMUSG00000050312	ProperStrand	5	chr19	8800355	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	4	-20.0058
chr7	25320757	25320821	protein_coding	Irgq	utr3	ENSMUSG00000041037	ProperStrand	19	chr19	8800435	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-9.4356
chr17	29728894	29728938	protein_coding	Tbc1d22b	intron	ENSMUSG00000042203	ProperStrand	21	chr4	131865475	131865517	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	2	-9.8774
chr2	127286238	127286267	protein_coding	Kcnip3	exon	ENSMUSG00000079056	ProperStrand	14	chr19	8798483	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-8.1240
chr2	71739222	71739239	protein_coding	Pdk1	utr3	ENSMUSG00000006494	ProperStrand	37	chr7	116663659	116663759	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.3721
chr15	76567376	76567476	protein_coding	Arhgap39	exon	ENSMUSG00000033697	ProperStrand	29	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	5	-15.6513
chr11	120208459	120208502	protein_coding	Actg1	exon	ENSMUSG00000062825	ProperStrand	178	chr11	97642952	97643059	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-1.7494
chrX	138159145	138159161	protein_coding	Irs4	exon	ENSMUSG00000054667	NonProperStrand	98	chr19	8963027	8963164	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-2.8158
chr2	156288148	156288232	protein_coding	Epb4.1l1	intron	ENSMUSG00000027624	ProperStrand	27	chr3	88497856	88497946	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-9.0653
chr4	126779159	126779205	protein_coding	Zmym6	exon	ENSMUSG00000042408	ProperStrand	10	chr11	69483200	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-5.8555
chr1	142965398	142965488	LINE	L1_Mur1	L1	chr1L1_Mur1142965415	ProperStrand	1	chr1	181189005	181189085	protein_coding	Smyd3	intron	ENSMUSG00000055067	NonProperStrand	190	1	-inf
chr2	69589348	69589448	protein_coding	Ppig	utr3	ENSMUSG00000042133	ProperStrand	13	chr2	69851248	69854205	protein_coding	Ubr3	exon	ENSMUSG00000044308	ProperStrand	62	1	-16.3986
chr4	59925413	59925431	protein_coding	Slc46a2	intron	ENSMUSG00000028386	ProperStrand	7	chr3	123210904	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-6.1463
chr7	35424418	35424435	protein_coding	Kctd15	utr3	ENSMUSG00000030499	NonProperStrand	9	chr2	26494763	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-6.8145
chr8	129468746	129468836	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	NonProperStrand	22	chr15	34370556	34370646	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	NonProperStrand	21	1	-17.2767
chr12	25686438	25686482	protein_coding	Kidins220	exon	ENSMUSG00000036333	ProperStrand	26	chr4	131865913	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-8.1659
chr7	20036950	20036999	protein_coding	Mark4	exon	ENSMUSG00000030397	ProperStrand	18	chr9	14849483	14849499	protein_coding	Panx1	utr5	ENSMUSG00000031934	NonProperStrand	1	1	-inf
chr17	14456212	14456230	protein_coding	Smoc2	intron	ENSMUSG00000023886	NonProperStrand	6	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-14.1247
chr13	101576566	101576604	protein_coding	Slc30a5	exon	ENSMUSG00000021629	ProperStrand	12	chr8	32260335	32260380	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-7.8408
chr17	46820245	46820285	protein_coding	Ppp2r5d	utr3	ENSMUSG00000059409	ProperStrand	97	chr16	23110532	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-3.1091
chr15	64109807	64109897	protein_coding	Asap1	intron	ENSMUSG00000022377	ProperStrand	29	chr12	17552954	17553034	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-6.5218
chr8	34693168	34693184	protein_coding	Tex15	exon	ENSMUSG00000009628	NonProperStrand	31	chr16	23110961	23110979	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0062
chr3	145665081	145665152	protein_coding	Syde2	exon	ENSMUSG00000036863	ProperStrand	5	chr18	35716771	35716871	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-6.9999
chr11	68886972	68887037	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	chr13	21264723	21264746	tRNA	tRNA998-LeuCAA	.	795209	ProperStrand	6	2	-14.2539
chr18	30266381	30266401	SINE	ID_B1	B4	chr18ID_B130266335	NonProperStrand	1	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-inf
chr8	13416897	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr16	17210492	17210512	protein_coding	Rimbp3	exon	ENSMUSG00000071636	ProperStrand	67	1	-6.2362
chr1	94839176	94839942	protein_coding	Capn10	exon	ENSMUSG00000026270	ProperStrand	32	chr16	23110911	23110994	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	8	-12.4454
chr5	36378353	36378453	protein_coding	Sorcs2	exon	ENSMUSG00000029093	ProperStrand	21	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	6	-19.3482
chr7	106628550	106630255	protein_coding	Rps3	exon	ENSMUSG00000030744	ProperStrand	159	chr9	120038615	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.4428
chr4	130600741	130600758	LTR	MTE2a	MaLR	chr4MTE2a130600703	NonProperStrand	21	chr5	100855900	100855974	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	1	-8.7468
chr14	76906770	76906799	protein_coding	Tsc22d1	utr3	ENSMUSG00000022010	ProperStrand	86	chr1	162965574	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.6368
chr15	38225721	38225774	protein_coding	Klf10	exon	ENSMUSG00000037465	ProperStrand	33	chr5	121655052	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	3	-11.6232
chr3	93589405	93589495	LINE	Lx5	L1	chr3Lx593588968	NonProperStrand	1	chr6	69323754	69323844	LINE	L1Md_T	L1	chr6L1Md_T69317909	NonProperStrand	1	1	-inf
chr1	72758355	72758717	protein_coding	Rpl37a	exon	ENSMUSG00000046330	ProperStrand	94	chr4	131865393	131865493	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	2	-5.4507
chr6	83318070	83318086	protein_coding	Tet3	exon	ENSMUSG00000034832	NonProperStrand	93	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-4.3686
chr10	125675796	125675886	LINE	Lx2	L1	chr10Lx2125675649	ProperStrand	1	chr10	125676071	125676161	LTR	MLT1C	MaLR	chr10MLT1C125676043	NonProperStrand	1	1	-inf
chr3	51192472	51192507	protein_coding	4930583H14Rik	utr3	ENSMUSG00000037161	ProperStrand	14	chr7	148634712	148634802	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	4	-inf
chr3	111926329	111926347	LTR	MTE-int	MaLR	chr3MTE-int111925792	NonProperStrand	1	chr4	131908380	131908414	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-inf
chr4	133648119	133648244	protein_coding	Aim1l	exon	ENSMUSG00000012123	ProperStrand	32	chr4	136501872	136501888	protein_coding	Epha8	exon	ENSMUSG00000028661	ProperStrand	13	1	-17.6338
chr2	144354636	144354726	protein_coding-noncoding	Polr3f	utr5	ENSMUSG00000027427	ProperStrand	1	chr2	144354361	144354440	protein_coding	Polr3f	intron	ENSMUSG00000027427	ProperStrand	3	1	-inf
chr15	58288213	58288261	protein_coding	D15Ertd621e	utr3	ENSMUSG00000037119	ProperStrand	26	chr12	3436376	3436479	protein_coding	Asxl2	intron	ENSMUSG00000037486	ProperStrand	21	1	-16.9793
chr5	130295414	130295489	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	chr3	85904467	85904557	snoRNA	ENSMUSG00000065847_SNORA32	.	ENSMUSG00000065847	ProperStrand	40	1	-6.0443
chr4	43505656	43505710	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr3	30515745	30515845	protein_coding	Mynn	utr3	ENSMUSG00000037730	ProperStrand	9	1	-6.7740
chr10	77362315	77362389	protein_coding	Lrrc3	utr3	ENSMUSG00000051652	ProperStrand	6	chr9	120039540	120039622	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	3	-18.0372
chr11	59305708	59306674	protein_coding	Zkscan17	exon	ENSMUSG00000020472	ProperStrand	23	chr1	138122796	138123423	protein_coding	5730559C18Rik	exon	ENSMUSG00000041605	ProperStrand	22	3	-19.9455
chr4	108738518	108738737	protein_coding	Osbpl9	exon	ENSMUSG00000028559	ProperStrand	17	chr10	39978350	39978484	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	3	-17.9544
chr2	174171556	174171785	protein_coding	Gnas	utr3	ENSMUSG00000027523	ProperStrand	41	chr18	80403700	80403717	protein_coding	Txnl4a	utr5	ENSMUSG00000057130	ProperStrand	44	1	-14.7234
chr14	51547263	51547361	protein_coding	Tmem55b	utr3	ENSMUSG00000035953	ProperStrand	14	chr14	33005039	33005058	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-6.8567
chr6	89306824	89306843	protein_coding	Plxna1	exon	ENSMUSG00000030084	ProperStrand	233	chrX	66661559	66661576	protein_coding	Aff2	intron	ENSMUSG00000031189	ProperStrand	5	1	-15.7296
chr10	75780819	75782271	protein_coding	Dip2a	exon	ENSMUSG00000020231	ProperStrand	25	chr5	124900781	124900871	protein_coding	Setd8	exon	ENSMUSG00000049327	ProperStrand	71	1	-14.7506
chr18	35655522	35655612	protein_coding	Sil1	intron	ENSMUSG00000024357	ProperStrand	31	chr10	23505199	23505279	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.2459
chr10	120368090	120368175	protein_coding	Lemd3	exon	ENSMUSG00000048661	ProperStrand	32	chr7	116663701	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.6411
chr6	52965701	52965718	protein_coding	Jazf1	intron	ENSMUSG00000063568	ProperStrand	43	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-6.5006
chr1	174593635	174593654	LINE	L1MC3	L1	chr1L1MC3174592924	ProperStrand	1	chr17	39985499	39985539	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-inf
chr4	131908357	131908457	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr1	52982330	52982366	protein_coding	1700019D03Rik	exon	ENSMUSG00000043629	ProperStrand	39	1	-8.1212
chr15	44503444	44503460	protein_coding	Sybu	utr3	ENSMUSG00000022340	NonProperStrand	28	chr4	131908300	131908400	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-4.6667
chr17	28363155	28363217	protein_coding	Def6	exon	ENSMUSG00000002257	ProperStrand	8	chr19	5918350	5918367	protein_coding	Cdc42ep2	exon	ENSMUSG00000045664	NonProperStrand	5	1	-18.8889
chr6	118333627	118333707	protein_coding	Bms1	utr3	ENSMUSG00000030138	ProperStrand	107	chr1	63225576	63225655	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	19	-20.3059
chr17	88384905	88384922	protein_coding	Msh6	exon	ENSMUSG00000005370	ProperStrand	150	chr18	74938045	74938128	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	ProperStrand	1022	1	-5.8369
chr14	55505896	55505958	protein_coding	Bcl2l2	utr3	ENSMUSG00000089682	ProperStrand	17	chr7	116663634	116663724	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.8573
chr19	60848912	60849469	protein_coding	Eif3a	exon	ENSMUSG00000024991	ProperStrand	287	chr3	95980332	95980412	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-3.8309
chr17	28486958	28486976	protein_coding	Tead3	utr5	ENSMUSG00000002249	ProperStrand	4	chr4	116828389	116828438	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-14.0561
chr2	5763062	5765940	protein_coding	Cdc123	exon	ENSMUSG00000039128	ProperStrand	19	chr19	8963027	8963095	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.3710
chr1	173341933	173341949	protein_coding	Usf1	utr5	ENSMUSG00000026641	NonProperStrand	144	chr6	125136376	125136465	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	2	-7.8305
chr8	127435645	127437943	protein_coding	Egln1	exon	ENSMUSG00000031987	ProperStrand	13	chr15	98350177	98350257	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-7.8110
chr11	6007410	6007500	protein_coding	Nudcd3	utr3	ENSMUSG00000053838	ProperStrand	26	chr5	149864485	149864565	protein_coding	Hmgb1	utr5	ENSMUSG00000066551	ProperStrand	99	1	-14.0028
chr2	179322378	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr14	76372292	76372355	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	1	-6.9048
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	NonProperStrand	14	chr18	35716701	35716762	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	NonProperStrand	45	3	-inf
chr6	49359068	49359131	protein_coding	Stk31	exon	ENSMUSG00000023403	ProperStrand	3	chr16	23110913	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr19	7095536	7095587	protein_coding	Stip1	utr3	ENSMUSG00000024966	ProperStrand	100	chr2	130103469	130103501	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-7.0462
chr9	78327477	78327577	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr2	135820133	135824416	protein_coding	Plcb4	exon	ENSMUSG00000039943	NonProperStrand	57	1	-6.4357
chr8	108012432	108012522	SINE	B3	B2	chr8B3108012415	ProperStrand	1	chr2	26493392	26493472	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-inf
chr7	117189867	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	chr11	51551279	51551425	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	9	-3.5565
chr17	39985144	39985188	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr11	62416967	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	4	-1.7871
chr13	107737212	107737228	protein_coding	Dimt1	utr5	ENSMUSG00000021692	ProperStrand	185	chr1	162968442	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-3.9114
chr13	74494656	74494673	protein_coding	Ccdc127	utr3	ENSMUSG00000021578	NonProperStrand	54	chr16	23111710	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	5	-10.2599
chr17	34330532	34330549	protein_coding	Tap1	exon	ENSMUSG00000037321	NonProperStrand	4	chr5	137748607	137748627	protein_coding	Srrt	intron	ENSMUSG00000037364	ProperStrand	31	1	-18.8692
chr9	40153858	40153877	protein_coding	Gramd1b	utr5	ENSMUSG00000040111	ProperStrand	40	chr17	71990923	71991000	snoRNA	ENSMUSG00000092713_CT010429.1	.	ENSMUSG00000092713	ProperStrand	182	1	-11.9058
chr12	110881082	110881114	lincRNA	Rian	intron	ENSMUSG00000091793	ProperStrand	612	chr3	104295615	104295677	protein_coding	Lrig2	exon	ENSMUSG00000032913	ProperStrand	10	1	-12.3278
chr9	20467864	20467964	protein_coding	Pin1	utr3	ENSMUSG00000032171	ProperStrand	17	chr1	162968244	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	3	-inf
chr15	99055310	99055331	protein_coding	Kcnh3	utr5	ENSMUSG00000037579	ProperStrand	24	chr11	6428039	6428120	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.9246
chr2	168580453	168580474	protein_coding	Sall4	exon	ENSMUSG00000027547	ProperStrand	82	chr4	146093517	146093617	protein_coding	Gm13051	utr3	ENSMUSG00000066009	ProperStrand	2	2	-inf
chr1	152268927	152269668	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	chr4	55025161	55025214	protein_coding	Zfp462	exon	ENSMUSG00000060206	ProperStrand	37	1	-9.8814
chr7	36388906	36400884	protein_coding	Ankrd27	exon	ENSMUSG00000034867	ProperStrand	132	chr16	23110454	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-2.3793
chr17	25095239	25095319	protein_coding	Hn1l	intron	ENSMUSG00000024165	NonProperStrand	1	chr1	52152003	52152093	protein_coding	Stat4	intron	ENSMUSG00000062939	ProperStrand	6	1	-inf
chr15	27523836	27523907	protein_coding	Ank	utr3	ENSMUSG00000022265	ProperStrand	37	chr19	8798521	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	4	-18.1405
chr2	179766897	179766916	protein_coding	Lsm14b	exon	ENSMUSG00000039108	ProperStrand	26	chr2	120648341	120675805	protein_coding	Ttbk2	utr5	ENSMUSG00000090100	ProperStrand	50	1	-15.3661
chr4	55036460	55063103	protein_coding	Zfp462	exon	ENSMUSG00000060206	ProperStrand	37	chr9	15118322	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-4.3749
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr4	133843609	133843627	protein_coding	Pdik1l	utr5	ENSMUSG00000050890	NonProperStrand	4	1	-12.5841
chr1	167795689	167795709	protein_coding	Pou2f1	utr3	ENSMUSG00000026565	ProperStrand	34	chr10	80641693	80641755	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	1	-8.6877
chr3	62739409	62739426	LINE	Lx8	L1	chr3Lx862739192	ProperStrand	1	chr4	131865855	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr3	101388802	101388820	protein_coding	Atp1a1	exon	ENSMUSG00000033161	NonProperStrand	5	chr3	108357255	108357355	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-9.6221
chr15	103175749	103176448	protein_coding	Itga5	exon	ENSMUSG00000000555	ProperStrand	28	chr18	35102297	35102340	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-8.1148
chr12	6660150	6660230	LINE	Lx9	L1	chr12Lx96660119	ProperStrand	1	chr12	6660031	6660121	LTR	MTD	MaLR	chr12MTD6659753	NonProperStrand	1	1	-inf
chr6	28477677	28478967	protein_coding	Snd1	exon	ENSMUSG00000001424	ProperStrand	210	chr7	117166819	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-2.5162
chr11	118900007	118900023	protein_coding	Cbx8	exon	ENSMUSG00000025578	ProperStrand	95	chr10	122702149	122702167	protein_coding	Fam19a2	utr5	ENSMUSG00000044071	NonProperStrand	52	1	-12.6784
chr3	104714004	104714063	protein_coding	St7l	intron	ENSMUSG00000045576	ProperStrand	19	chr18	35716736	35716826	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-7.1642
chr4	40692577	40692593	protein_coding	Smu1	exon	ENSMUSG00000028409	ProperStrand	23	chr12	106269445	106269557	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	3	-13.9494
chr3	95144097	95144113	protein_coding	Setdb1	exon	ENSMUSG00000015697	NonProperStrand	4	chr7	29147164	29147199	protein_coding	Plekhg2	exon	ENSMUSG00000037552	ProperStrand	6	1	-19.4007
chrX	130496426	130496668	protein_coding	Sytl4	exon	ENSMUSG00000031255	ProperStrand	169	chr11	62416575	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-3.2172
chr4	139199452	139200066	protein_coding	Aldh4a1	exon	ENSMUSG00000028737	ProperStrand	20	chr16	23111690	23111780	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	5	-16.4087
chr10	127521199	127521270	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	chr12	106269284	106269384	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	2	-1.2823
chr12	87811296	87861827	protein_coding	Esrrb	exon	ENSMUSG00000021255	ProperStrand	254	chr7	29136525	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	9	-9.3951
chr11	79845838	79845867	protein_coding	Suz12	utr3	ENSMUSG00000017548	ProperStrand	53	chr6	71530708	71530728	protein_coding	Chmp3	utr3	ENSMUSG00000053119	ProperStrand	16	1	-16.2539
chr2	24915691	24915707	protein_coding	Nelf	exon	ENSMUSG00000006476	ProperStrand	40	chr16	23111690	23111753	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.5776
chr19	8971540	8971640	protein_coding	Ints5	exon	ENSMUSG00000071652	ProperStrand	6	chr11	68886971	68887011	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-8.8009
chr6	38046854	38046944	protein_coding	Atp6v0a4	utr5	ENSMUSG00000038600	ProperStrand	14	chr7	28302682	28302762	protein_coding	Prx	utr3	ENSMUSG00000053198	ProperStrand	21	1	-18.3283
chr10	80541253	80541354	protein_coding	Thop1	exon	ENSMUSG00000004929	ProperStrand	20	chr17	24857815	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.2966
chr5	101108852	101108869	protein_coding	Hpse	utr3	ENSMUSG00000035273	NonProperStrand	18	chr4	131865384	131865407	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-6.3553
chr1	25923674	25923692	LINE	L1_Mus2	L1	chr1L1_Mus225923346	ProperStrand	1	chr7	151765212	151765228	antisense	Gm10574	.	ENSMUSG00000073778	ProperStrand	357	1	-inf
chr19	37495777	37495821	protein_coding	Kif11	utr3	ENSMUSG00000012443	ProperStrand	29	chr3	123210854	123210887	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-5.7311
chr2	132089145	132089161	protein_coding	Cds2	utr5	ENSMUSG00000058793	NonProperStrand	16	chr4	131908239	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-6.2934
chr5	125200366	125200383	protein_coding	Atp6v0a2	exon	ENSMUSG00000038023	NonProperStrand	7	chr8	60437145	60437162	protein_coding	Galntl6	exon	ENSMUSG00000061864	ProperStrand	44	1	-18.3722
chr3	10331345	10331361	protein_coding	Impa1	utr5	ENSMUSG00000027531	ProperStrand	11	chr6	33414027	33414095	protein_coding	Exoc4	intron	ENSMUSG00000029763	ProperStrand	120	1	-15.3958
chr1	162968246	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	chr1	162967115	162967136	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	1	-2.4549
chr2	11518264	11518364	protein_coding	Rbm17	exon	ENSMUSG00000037197	ProperStrand	50	chr3	123210854	123210907	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.3689
chr9	20715881	20715898	protein_coding	Dnmt1	exon	ENSMUSG00000004099	NonProperStrand	12	chr3	88985113	88985875	protein_coding	Scamp3	exon	ENSMUSG00000028049	ProperStrand	32	1	-17.6497
chr19	47743851	47743867	protein_coding	Col17a1	exon	ENSMUSG00000025064	ProperStrand	10	chr2	132121301	132122977	protein_coding	Cds2	exon	ENSMUSG00000058793	ProperStrand	47	1	-17.7383
chr10	23770362	23770378	protein_coding	Taar7f	exon	ENSMUSG00000060825	NonProperStrand	40	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.0291
chr6	31476695	31478468	protein_coding	Podxl	exon	ENSMUSG00000025608	ProperStrand	37	chr12	60774072	60774110	snoRNA	ENSMUSG00000077603_SNORA3	.	ENSMUSG00000077603	ProperStrand	185	1	-12.0303
chr9	108962262	108962279	protein_coding	Atrip	utr3	ENSMUSG00000025646	ProperStrand	3	chr3	153574602	153574655	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	1	-16.0383
chr18	61715367	61715386	protein_coding	Csnk1a1	utr5	ENSMUSG00000024576	NonProperStrand	35	chr7	116664872	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.5143
chr9	44446920	44446963	protein_coding	Ddx6	utr3	ENSMUSG00000032097	ProperStrand	59	chr7	51505223	51505309	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	1	-8.1851
chr4	131908236	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	chr4	131866609	131866676	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	9	-1.4071
chr11	51420200	51420275	protein_coding	Hnrnpab	utr5	ENSMUSG00000020358	ProperStrand	124	chr5	130300458	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	9	-16.5691
chr7	114354127	114354217	protein_coding	Rbmxl2	utr3	ENSMUSG00000073894	ProperStrand	23	chr18	33954853	33954933	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-5.3416
chr12	80169008	80169025	protein_coding	Plekhh1	exon	ENSMUSG00000060716	ProperStrand	24	chr5	121655017	121655127	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.5126
chr16	90223070	90223089	protein_coding	Sod1	exon	ENSMUSG00000022982	ProperStrand	75	chrX	34622905	34622990	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-2.7739
chr17	35299858	35299882	protein_coding	Prrc2a	exon	ENSMUSG00000024393	ProperStrand	315	chr5	114683142	114683158	protein_coding	Acacb	exon	ENSMUSG00000042010	NonProperStrand	4	1	-15.6567
chrX	165091096	165091194	LTR	MTEa	MaLR	chrXMTEa165091013	ProperStrand	1	chr4	144804607	144804625	protein_coding	Tnfrsf1b	utr3	ENSMUSG00000028599	ProperStrand	13	1	-inf
chr6	124820503	124820522	protein_coding	Cd4	exon	ENSMUSG00000023274	ProperStrand	9	chr7	116664796	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-10.2063
chr1	38275166	38275240	protein_coding	Aff3	exon	ENSMUSG00000037138	ProperStrand	20	chr18	60848736	60848753	protein_coding	Ndst1	utr3	ENSMUSG00000054008	NonProperStrand	6	1	-19.1876
chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-5.6449
chr6	28470185	28470264	protein_coding	Snd1	utr5	ENSMUSG00000001424	ProperStrand	210	chr8	13876097	13876187	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-4.6933
chr19	23713726	23713743	protein_coding	1700028P14Rik	intron	ENSMUSG00000033053	NonProperStrand	11	chr8	113362432	113362489	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	1	-12.7292
chr4	133145764	133145799	protein_coding	Gpn2	exon	ENSMUSG00000028848	ProperStrand	6	chr19	8963027	8963127	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-11.1401
chr4	83463401	83463421	protein_coding	4930473A06Rik	intron	ENSMUSG00000052407	NonProperStrand	9	chr7	117189933	117190013	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-11.5248
chr10	127750985	127751072	protein_coding	Pan2	exon	ENSMUSG00000005682	ProperStrand	53	chr11	97642952	97642969	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.6858
chr4	116883495	116883551	snRNA	ENSMUSG00000070237_U5	.	ENSMUSG00000070237	ProperStrand	154	chr7	52381973	52382011	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-4.8688
chr5	33289299	33289344	protein_coding	Depdc5	exon	ENSMUSG00000037426	ProperStrand	26	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.7765
chr18	34764291	34764512	protein_coding	Brd8	exon	ENSMUSG00000003778	ProperStrand	27	chr9	36543047	36543066	protein_coding	Stt3a	exon	ENSMUSG00000032116	ProperStrand	31	1	-16.2120
chr11	68886949	68887063	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	chr7	52381972	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	13	-6.8823
chr16	17278217	17278297	protein_coding	Tmem191c	utr3	ENSMUSG00000055692	ProperStrand	16	chr8	73419658	73419748	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-9.3231
chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	chr3	108357255	108357308	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-3.0352
chr11	69804977	69804993	protein_coding	Gabarap	utr5	ENSMUSG00000018567	ProperStrand	24	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-9.5860
chr1	43579479	43579510	protein_coding	Nck2	intron	ENSMUSG00000066877	ProperStrand	21	chr18	75161566	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-9.3176
chr4	82907817	82907842	protein_coding	Ttc39b	exon	ENSMUSG00000038172	ProperStrand	78	chr2	26494755	26494845	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.6435
chr11	62416503	62418097	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr16	23110828	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	24	-1.3762
chr4	84363157	84363237	LTR	ORR1D2	MaLR	chr4ORR1D284363059	ProperStrand	1	chr4	84362951	84363041	Simple_repeat	(CAGG)n	Simple_repeat	chr4(CAGG)n84362956	NonProperStrand	1	1	-inf
chr18	60937530	60938088	protein_coding	Rps14	exon	ENSMUSG00000024608	ProperStrand	154	chr5	31458626	31458673	protein_coding	Gtf3c2	utr3	ENSMUSG00000029144	ProperStrand	22	1	-13.4555
chr1	5114360	5114377	protein_coding	Atp6v1h	exon	ENSMUSG00000033793	ProperStrand	20	chr19	8800355	8800409	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-5.6450
chr2	70927899	70927917	protein_coding	Dcaf17	exon	ENSMUSG00000041966	NonProperStrand	89	chr10	39978276	39978376	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	7	-19.9185
chr15	37911240	37975462	protein_coding	Ubr5	exon	ENSMUSG00000037487	ProperStrand	258	chr18	35716762	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-0.7903
chr6	82686584	82686630	protein_coding	Hk2	exon	ENSMUSG00000000628	ProperStrand	88	chr18	58103616	58103702	protein_coding	Slc12a2	exon	ENSMUSG00000024597	ProperStrand	20	1	-14.7684
chr7	88461867	88461883	protein_coding	Pde8a	exon	ENSMUSG00000025584	NonProperStrand	5	chr19	8963153	8963182	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-7.1260
chr18	46280699	46280715	LTR	MTD	MaLR	chr18MTD46280541	NonProperStrand	2	chr5	108336363	108336411	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-inf
chr19	5795999	5796049	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr5	143666928	143667028	protein_coding	Actb	exon	ENSMUSG00000029580	ProperStrand	446	1	-3.6584
chr8	125866761	125866777	protein_coding	Spire2	intron	ENSMUSG00000010154	NonProperStrand	3	chr7	106631402	106631442	snoRNA	ENSMUSG00000065822_Snord15a	.	ENSMUSG00000065822	ProperStrand	128	1	-18.3580
chr6	107738191	107738208	Other	RMER1B	Other	chr6RMER1B107738112	ProperStrand	29	chr14	51536016	51536060	protein_coding	Osgep	exon	ENSMUSG00000006289	ProperStrand	3	1	-inf
chr7	144434035	144434054	protein_coding	Ebf3	intron	ENSMUSG00000010476	ProperStrand	9	chr17	23955410	23955476	protein_coding	Srrm2	utr3	ENSMUSG00000039218	ProperStrand	521	1	-12.8730
chr15	60661082	60661098	lincRNA	9930014A18Rik	exon	ENSMUSG00000044513	ProperStrand	54	chr2	25312429	25313191	protein_coding	Clic3	exon	ENSMUSG00000015093	ProperStrand	79	1	-12.9736
chr10	127556867	127564568	protein_coding	Baz2a	exon	ENSMUSG00000040054	ProperStrand	274	chr4	131865859	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-0.8170
chr3	152450610	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	chr11	77995191	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	3	-5.5333
chr11	120570532	120570696	protein_coding	Aspscr1	utr3	ENSMUSG00000025142	ProperStrand	53	chr5	74489580	74489670	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-4.0106
chr12	118064883	118064905	protein_coding	Ptprn2	intron	ENSMUSG00000056553	NonProperStrand	38	chr16	23110911	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.7634
chr14	56994368	56994387	protein_coding	Atp12a	intron	ENSMUSG00000022229	ProperStrand	7	chr7	19984654	19984796	protein_coding	Klc3	exon	ENSMUSG00000040714	NonProperStrand	1	1	-inf
mmu-miR-6240	4	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr15	84101747	84103941	protein_coding	Parvb	exon	ENSMUSG00000022438	ProperStrand	127	1	-4.4513
chr8	75020422	75020512	protein_coding	Med26	exon	ENSMUSG00000045248	ProperStrand	45	chr15	98350202	98350282	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-5.3188
chr11	77270999	77271022	protein_coding	Ssh2	utr3	ENSMUSG00000037926	ProperStrand	18	chr6	115757992	115758045	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	2	-12.6476
chr2	148506126	148506145	LTR	MER67C	ERV1	chr2MER67C148506121	ProperStrand	3	chr15	99162487	99165322	protein_coding	Fmnl3	exon	ENSMUSG00000023008	ProperStrand	13	1	-inf
chr8	71348154	71348244	protein_coding	Ints10	intron	ENSMUSG00000031864	ProperStrand	28	chr4	131865856	131865936	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.0580
chr18	35714172	35714262	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	NonProperStrand	47	chr1	89681242	89681322	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	NonProperStrand	11	1	-17.2661
chr11	69731108	69731194	protein_coding	Eif5a	exon	ENSMUSG00000078812	ProperStrand	164	chr11	97642996	97643086	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-0.9657
chr2	143767953	143767969	protein_coding	Dstn	exon	ENSMUSG00000015932	NonProperStrand	7	chr10	61150704	61150732	protein_coding	Sar1a	intron	ENSMUSG00000020088	ProperStrand	15	1	-21.2664
chr10	128002866	128002898	protein_coding	Pa2g4	utr5	ENSMUSG00000025364	ProperStrand	72	chr5	108336433	108336490	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-4.5305
mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr18	69806424	69806442	protein_coding	Tcf4	intron	ENSMUSG00000053477	NonProperStrand	19	1	-8.2060
chr18	57522892	57522973	protein_coding	Prrc1	exon	ENSMUSG00000024594	ProperStrand	22	chr1	162966007	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-9.0996
chr1	59539683	59539700	protein_coding	Fzd7	utr5	ENSMUSG00000041075	ProperStrand	373	chr4	62052426	62052456	protein_coding	Slc31a1	utr3	ENSMUSG00000066150	ProperStrand	45	2	-16.0974
chr2	90235292	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	3	-3.2304
chr4	128906061	128906133	protein_coding	C77080	intron	ENSMUSG00000050390	ProperStrand	48	chr4	131908689	131908722	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-2.8913
chr2	160782837	160782937	protein_coding	Chd6	exon	ENSMUSG00000057133	ProperStrand	104	chr14	76247779	76247842	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	5	-13.7155
chr10	86165663	86165731	protein_coding	Hsp90b1	exon	ENSMUSG00000020048	ProperStrand	396	chr16	85795631	85795647	protein_coding	Adamts1	utr3	ENSMUSG00000022893	ProperStrand	102	1	-8.4711
chr1	133252405	133252451	protein_coding	Srgap2	intron	ENSMUSG00000026425	ProperStrand	299	chr17	30772308	30772324	protein_coding	Dnahc8	utr5	ENSMUSG00000033826	ProperStrand	246	1	-7.2787
chr5	77391512	77393505	protein_coding	Paics	exon	ENSMUSG00000029247	ProperStrand	78	chr1	162966016	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-3.1245
chr1	78692773	78693486	protein_coding	Acsl3	exon	ENSMUSG00000032883	ProperStrand	8	chr4	88055290	88055350	protein_coding	BC057079	intron	ENSMUSG00000038368	ProperStrand	52	2	-19.1112
chr8	63957321	63957337	LTR	ORR1E	MaLR	chr8ORR1E63957037	NonProperStrand	5	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-12.8963
chr9	78023109	78023144	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr11	30710839	30710897	protein_coding	Psme4	exon	ENSMUSG00000040850	ProperStrand	40	2	-10.7983
chr12	11261975	11262008	protein_coding	Gen1	exon	ENSMUSG00000051235	ProperStrand	12	chr5	121655055	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-6.9120
chrX	11635848	11635865	protein_coding	Bcor	exon	ENSMUSG00000040363	NonProperStrand	293	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-1.0295
chr2	90235301	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	31467165	31467215	protein_coding	Fubp3	exon	ENSMUSG00000026843	ProperStrand	35	4	-17.0458
chr11	79946278	79946368	protein_coding	Atad5	exon	ENSMUSG00000017550	ProperStrand	5	chr18	35716749	35716829	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-6.9999
chr12	81272729	81272746	protein_coding	Actn1	exon	ENSMUSG00000015143	ProperStrand	128	chr14	33005140	33005160	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-2.6215
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	ProperStrand	10	chr8	126077957	126077982	protein_coding	Gm20388	intron	ENSMUSG00000092329	ProperStrand	295	1	-13.7873
chr15	76181927	76181968	protein_coding	Maf1	utr5	ENSMUSG00000022553	ProperStrand	9	chr11	33745818	33745834	protein_coding	Kcnip1	intron	ENSMUSG00000053519	ProperStrand	45	1	-17.6641
chr11	75322695	75322781	protein_coding	Prpf8	utr3	ENSMUSG00000020850	ProperStrand	255	chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	1	-6.6090
chr14	19102452	19102469	protein_coding	Rpl15	exon	ENSMUSG00000012405	ProperStrand	145	chr2	28325611	28325699	protein_coding	Mrps2	utr3	ENSMUSG00000035772	ProperStrand	8	2	-19.4215
chr2	153026432	153026522	protein_coding	Tm9sf4	exon	ENSMUSG00000068040	ProperStrand	27	chrX	34622940	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-4.6723
chr4	153410349	153410365	protein_coding	Ccdc27	exon	ENSMUSG00000039492	ProperStrand	94	chr1	162965538	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.4840
chr5	65779646	65779808	protein_coding	Rpl9	utr3	ENSMUSG00000047215	ProperStrand	113	chr17	24857738	24857828	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.3184
chr6	53176437	53176453	LTR	MTE2b	MaLR	chr6MTE2b53176429	ProperStrand	5	chr7	4691730	4691754	protein_coding	Suv420h2	utr5	ENSMUSG00000059851	NonProperStrand	70	1	-18.0003
chr2	129855498	129855516	protein_coding	Tgm3	exon	ENSMUSG00000027401	ProperStrand	4	chr5	123622050	123622066	protein_coding	Hpd	exon	ENSMUSG00000029445	ProperStrand	254	1	-16.0461
chr9	50816824	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	chr1	181027187	181027205	protein_coding	Smyd3	intron	ENSMUSG00000055067	ProperStrand	231	1	-9.1069
chr11	72739664	72739754	protein_coding	Zzef1	utr3	ENSMUSG00000055670	ProperStrand	48	chr16	23110914	23110994	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	9	-10.7612
chr10	67010719	67010819	protein_coding	Ado	utr3	ENSMUSG00000057134	ProperStrand	7	chr2	26768389	26768433	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-9.9835
chr8	73419657	73419757	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	chr9	15118517	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	2	-0.8379
chr6	122678702	122678802	protein_coding	Slc2a3	utr3	ENSMUSG00000003153	ProperStrand	682	chr18	75161536	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	5	-11.8069
chr2	152144922	152145022	protein_coding	Rbck1	exon	ENSMUSG00000027466	ProperStrand	30	chr7	119934438	119934484	protein_coding	Tead1	intron	ENSMUSG00000055320	ProperStrand	217	1	-12.1368
chr5	77773916	77774350	protein_coding	Polr2b	exon	ENSMUSG00000029250	ProperStrand	68	chr11	97642952	97642968	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.2606
chr1	4900015	4900043	protein_coding	Rgs20	utr3	ENSMUSG00000002459	ProperStrand	10	chr18	33954816	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	5	-20.4243
chr2	90235290	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	76512447	76512537	protein_coding	Slc19a1	exon	ENSMUSG00000001436	ProperStrand	11	2	-12.6676
chr10	18393547	18393563	protein_coding	D10Bwg1379e	intron	ENSMUSG00000019852	NonProperStrand	120	chr8	13416894	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-5.0976
chr5	135699085	135702466	protein_coding	Baz1b	exon	ENSMUSG00000002748	ProperStrand	83	chr17	24857733	24857813	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.7731
chr10	76517539	76517597	protein_coding	Col18a1	exon	ENSMUSG00000001435	ProperStrand	287	chr10	110918549	110918639	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-0.9579
chr15	79083392	79083409	protein_coding	Pick1	intron	ENSMUSG00000068206	ProperStrand	21	chr11	69482387	69482409	snoRNA	ENSMUSG00000089542_snoU6-77	.	ENSMUSG00000089542	ProperStrand	138	1	-13.7720
chr7	133296655	133296745	protein_coding	Xpo6	exon	ENSMUSG00000000131	ProperStrand	36	chr4	131865390	131865470	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-4.9810
chr11	100451252	100452239	protein_coding	Dnajc7	exon	ENSMUSG00000014195	ProperStrand	49	chr4	137094177	137094342	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	1	-8.5103
chr10	12103083	12103107	protein_coding	Utrn	utr3	ENSMUSG00000019820	ProperStrand	69	chr4	123028149	123028255	protein_coding	Macf1	exon	ENSMUSG00000028649	ProperStrand	320	3	-19.2912
chr12	118269153	118269171	protein_coding	Ptprn2	intron	ENSMUSG00000056553	ProperStrand	13	chr3	68889203	68889258	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-6.2197
chr8	71636438	71636493	protein_coding	Atp6v1b2	utr3	ENSMUSG00000006273	ProperStrand	29	chr3	96363945	96364143	protein_coding	Txnip	exon	ENSMUSG00000038393	ProperStrand	172	1	-12.6706
chr12	81275158	81275527	protein_coding	Actn1	exon	ENSMUSG00000015143	ProperStrand	128	chr2	18508669	18508688	tRNA	tRNA1947-AsnGTT	.	69064	ProperStrand	179	1	-9.6003
chr4	125857454	125857502	protein_coding	Thrap3	exon	ENSMUSG00000043962	ProperStrand	84	chr4	131908687	131908720	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-2.7251
chr2	25450054	25450144	protein_coding	B230208H17Rik	intron	ENSMUSG00000015087	ProperStrand	25	chrX	12232691	12232771	protein_coding	1810030O07Rik	utr3	ENSMUSG00000044148	ProperStrand	6	1	-19.4354
chr17	27767411	27768185	protein_coding	Rps10	exon	ENSMUSG00000052146	ProperStrand	94	chr2	26494708	26494781	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.3254
chr4	43505656	43505681	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr4	151701673	151704188	protein_coding	Rpl22	exon	ENSMUSG00000028936	ProperStrand	112	1	-2.0043
chr19	4834172	4834262	protein_coding	Ccs	exon	ENSMUSG00000034108	ProperStrand	5	chr7	116664813	116664893	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-7.4478
chr14	35124254	35135005	protein_coding	Glud1	exon	ENSMUSG00000021794	ProperStrand	72	chr10	23505154	23505284	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-1.9763
chr4	119941547	119941564	protein_coding	Foxo6	exon	ENSMUSG00000052135	ProperStrand	31	chr11	97642952	97643037	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	6	-18.5291
chr7	151765212	151765228	antisense	Gm10574	.	ENSMUSG00000073778	ProperStrand	357	chr11	102175516	102176199	protein_coding	Ubtf	exon	ENSMUSG00000020923	ProperStrand	66	1	-9.5490
chr14	121778179	121778259	protein_coding	Stk24	utr5	ENSMUSG00000063410	ProperStrand	7	chr18	73693107	73693129	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-9.9039
chr9	21606177	21606193	protein_coding	Dock6	exon	ENSMUSG00000032198	NonProperStrand	30	chr5	130300432	130300500	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.7596
chr9	43549355	43549434	Low_complexity	GA-rich	Low_complexity	chr9GA-rich43549319	NonProperStrand	1	chr6	13578616	13578633	protein_coding	B630005N14Rik	exon	ENSMUSG00000042742	NonProperStrand	2	1	-inf
chr1	88426101	88426313	protein_coding	Ptma	exon	ENSMUSG00000026238	ProperStrand	385	chr14	33005038	33005139	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-0.9594
chr7	147130848	147130878	protein_coding	Utf1	exon	ENSMUSG00000047751	ProperStrand	67	chr11	69483190	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-6.0967
chr2	173943458	173943521	protein_coding	Npepl1	intron	ENSMUSG00000039263	ProperStrand	5	chr17	24857743	24857826	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-7.1522
chr7	90016010	90016027	protein_coding	Mex3b	utr5	ENSMUSG00000057706	NonProperStrand	4	chr9	120039533	120039560	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-8.8220
chr15	79728626	79729491	protein_coding	Apobec3	exon	ENSMUSG00000009585	ProperStrand	14	chr5	136333035	136333053	protein_coding	Srrm3	utr3	ENSMUSG00000039860	ProperStrand	41	1	-17.2625
chr9	98850237	98850256	lincRNA	Foxl2os	exon	ENSMUSG00000074122	NonProperStrand	6	chr17	24857796	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-6.7526
chr15	97505611	97505688	protein_coding	Rpap3	utr3	ENSMUSG00000022466	ProperStrand	13	chr15	82980196	82980225	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	2	-16.2415
chr11	60370927	60370943	protein_coding	Alkbh5	utr3	ENSMUSG00000042650	ProperStrand	203	chr9	72951139	72951190	protein_coding	2410004A20Rik	exon	ENSMUSG00000092622	ProperStrand	6	1	-15.6225
chr7	30074412	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-6.1226
chr10	29064184	29064232	protein_coding	Rnf146	utr3	ENSMUSG00000038876	ProperStrand	4	chr16	23110852	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.6489
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	111121065	111121152	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	5	-0.9197
chr2	92811004	92811064	protein_coding	Prdm11	utr3	ENSMUSG00000075028	ProperStrand	6	chr1	162965539	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-7.8657
chr11	77996557	77996607	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	chr13	49779667	49779729	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-0.7247
chr15	99610965	99611055	protein_coding	Lima1	exon	ENSMUSG00000023022	ProperStrand	159	chr4	131908814	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	44	-inf
chr2	26493406	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr19	44865274	44865290	protein_coding	Pax2	exon	ENSMUSG00000004231	ProperStrand	6	1	-10.9258
chr5	132960816	132960837	protein_coding	Auts2	intron	ENSMUSG00000029673	NonProperStrand	37	chr9	55548226	55548245	protein_coding	Scaper	intron	ENSMUSG00000034007	ProperStrand	19	1	-16.6136
chr2	131882472	131882523	protein_coding	Slc23a2	exon	ENSMUSG00000027340	ProperStrand	44	chr3	96635370	96635387	protein_coding	Pdzk1	intron	ENSMUSG00000038298	ProperStrand	101	1	-12.8950
chr7	52560178	52560194	protein_coding	Trpm4	utr3	ENSMUSG00000038260	ProperStrand	161	chr11	68886963	68887038	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	2	-4.1897
chr5	129526109	129526440	protein_coding	Ran	utr5	ENSMUSG00000029430	ProperStrand	82	chr2	130101984	130102051	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-4.7518
mmu-miR-2137	2	20	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	chr8	111411460	111411479	protein_coding	Zfhx3	intron	ENSMUSG00000038872	ProperStrand	65	1	-11.3951
chr2	129029878	129032161	protein_coding	Slc20a1	exon	ENSMUSG00000027397	ProperStrand	81	chr2	145076802	145209249	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-7.1258
chr6	122677991	122678057	protein_coding	Slc2a3	utr3	ENSMUSG00000003153	ProperStrand	682	chr17	35089183	35089225	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-1.2298
chr6	88050886	88050919	protein_coding	Rpn1	exon	ENSMUSG00000030062	ProperStrand	58	chr10	23505559	23505602	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	2	-12.1982
chr19	8800377	8800457	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	chr7	16524110	16524200	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	1	-0.7440
chr4	131908364	131908464	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr11	77973261	77973314	protein_coding	Traf4	utr3	ENSMUSG00000017386	ProperStrand	34	1	-8.3974
chr18	38840783	38840841	protein_coding	Arhgap26	intron	ENSMUSG00000036452	ProperStrand	46	chr7	117166802	117166858	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	2	-8.7577
chr9	47381989	47382069	protein_coding	Cadm1	intron	ENSMUSG00000032076	NonProperStrand	8	chr9	56222196	56222286	protein_coding	C230081A13Rik	utr5	ENSMUSG00000074305	NonProperStrand	5	1	-18.8889
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr10	39978350	39978414	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-0.7710
chr1	182514034	182516065	protein_coding	Parp1	exon	ENSMUSG00000026496	ProperStrand	227	chr10	90581179	90581202	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	3	-6.3018
chrX	12717656	12733503	protein_coding	Usp9x	exon	ENSMUSG00000031010	ProperStrand	174	chr4	131865902	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	7	-6.4322
chr13	58365388	58365488	protein_coding	Gkap1	exon	ENSMUSG00000021552	ProperStrand	22	chr4	131908236	131908293	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.0772
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr1	180885279	180885295	protein_coding	Smyd3	utr3	ENSMUSG00000055067	NonProperStrand	190	1	-6.4253
chr8	86535302	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	chr14	76247725	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-4.3646
chr8	73989273	73989312	protein_coding	Mrpl34	exon	ENSMUSG00000034880	ProperStrand	8	chr15	34370545	34370576	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-12.2805
chr19	5801148	5801188	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-1.1649
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr4	124796957	124796973	protein_coding	Zc3h12a	exon	ENSMUSG00000042677	ProperStrand	37	2	-13.9333
chr1	95387758	95392159	protein_coding	Sept2	exon	ENSMUSG00000026276	ProperStrand	136	chr1	88252836	88252901	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-5.0381
chr2	22485574	22490459	protein_coding	Gad2	exon	ENSMUSG00000026787	NonProperStrand	7	chrX	40944841	40944857	protein_coding	Gm362	exon	ENSMUSG00000078320	ProperStrand	129	1	-16.2389
chr15	72933561	73014503	protein_coding	Eif2c2	utr3	ENSMUSG00000036698	ProperStrand	154	chr10	23505150	23505240	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-1.2126
chr4	43505656	43505723	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr8	87413545	87414670	protein_coding	Gcdh	exon	ENSMUSG00000003809	ProperStrand	10	1	-6.5547
chr9	120039532	120039630	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	chr11	83107805	83107903	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	6	-3.7345
chr10	69653817	69653907	protein_coding	Ccdc6	utr3	ENSMUSG00000048701	ProperStrand	72	chr11	6519863	6519943	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-7.5788
chr6	125127830	125127930	protein_coding	Ncapd2	exon	ENSMUSG00000038252	ProperStrand	170	chr3	68889026	68889070	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-1.5220
chr13	51743567	51743706	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	chr18	35714145	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	8	-1.2713
chr14	51463983	51463999	protein_coding	Tep1	exon	ENSMUSG00000006281	NonProperStrand	73	chr16	90386836	90386853	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	1	-11.8147
chr18	62676668	62676748	protein_coding	Fbxo38	exon	ENSMUSG00000042211	ProperStrand	18	chr17	24857760	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.5014
chr6	87949907	87950007	protein_coding	Rab7	utr3	ENSMUSG00000079477	ProperStrand	33	chr7	118219575	118219638	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-5.3243
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	59778161	59778177	protein_coding	Rasd1	exon	ENSMUSG00000049892	NonProperStrand	49	1	-4.8520
chr18	6072930	6072952	protein_coding	Arhgap12	intron	ENSMUSG00000041225	ProperStrand	25	chr15	98350177	98350267	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-6.4822
chr15	76003523	76003603	protein_coding	Plec	exon	ENSMUSG00000022565	ProperStrand	186	chr19	8989067	8989240	protein_coding	Ganab	exon	ENSMUSG00000071650	ProperStrand	145	1	-9.2744
chr16	89789020	89789100	protein_coding	Tiam1	utr3	ENSMUSG00000002489	ProperStrand	80	chr13	69751005	69751207	protein_coding	Nsun2	exon	ENSMUSG00000021595	ProperStrand	110	1	-11.5179
chr10	63978338	63978357	protein_coding	Ctnna3	intron	ENSMUSG00000060843	NonProperStrand	22	chr8	129468744	129468879	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-6.3807
chr11	6519867	6519944	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	chr8	22813646	22813702	snoRNA	ENSMUSG00000088271_SNORA5	.	ENSMUSG00000088271	ProperStrand	6	6	-inf
chr11	59026138	59026329	protein_coding	Arf1	exon	ENSMUSG00000048076	ProperStrand	52	chr17	13112512	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	3	-11.5113
chr17	24342578	24343602	protein_coding	Ntn3	utr3	ENSMUSG00000079662	ProperStrand	237	chr12	17552948	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	4	-9.0974
chr6	4707092	4707216	protein_coding	Peg10	exon	ENSMUSG00000092035	ProperStrand	102	chr11	97643071	97643090	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.6170
chr10	116705049	116705065	LINE	Lx8	L1	chr10Lx8116704945	ProperStrand	6	chr1	89673736	89673757	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-7.8515
chr15	84892912	84892952	protein_coding	Fam118a	utr3	ENSMUSG00000022434	ProperStrand	44	chr7	17423958	17423998	protein_coding	Strn4	exon	ENSMUSG00000030374	ProperStrand	12	1	-17.3669
chr7	52246884	52246903	lincRNA	Gm15545	intron	ENSMUSG00000087138	ProperStrand	2	chr7	116664823	116664913	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-9.7350
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr3	96132454	96132518	snRNA	ENSMUSG00000075978_U1	.	ENSMUSG00000075978	ProperStrand	132	2	-5.1815
chr15	38619358	38619396	protein_coding	Atp6v1c1	intron	ENSMUSG00000022295	ProperStrand	7	chr8	73926954	73928136	protein_coding	5430437P03Rik	exon	ENSMUSG00000031820	ProperStrand	11	1	-20.7588
chr13	73941156	73941228	protein_coding	Slc12a7	intron	ENSMUSG00000017756	ProperStrand	80	chr17	24857777	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.8304
chr15	37927643	37927677	protein_coding	Ubr5	exon	ENSMUSG00000037487	ProperStrand	258	chr7	150717302	150717352	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-2.7783
chr4	115484067	115484084	protein_coding	Atpaf1	utr3	ENSMUSG00000028710	ProperStrand	202	chr17	24858107	24858179	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	1	-7.2313
chr4	126117870	126117887	protein_coding	Eif2c1	intron	ENSMUSG00000041530	ProperStrand	30	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.9337
chr5	147644473	147644492	protein_coding	Rpl21	utr5	ENSMUSG00000041453	NonProperStrand	2	chr3	85942734	85942780	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	1	-17.3223
chr7	29171540	29171558	protein_coding	Med29	utr3	ENSMUSG00000003444	NonProperStrand	134	chr9	15119646	15119969	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-2.5690
chr4	133928308	133928344	protein_coding	Extl1	utr5	ENSMUSG00000028838	ProperStrand	14	chr1	89673599	89673689	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	3	-14.2291
chr13	9833549	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr2	154690228	154690328	protein_coding	Raly	intron	ENSMUSG00000027593	ProperStrand	116	1	-3.7042
chr17	6232006	6232022	protein_coding	Tulp4	exon	ENSMUSG00000034377	NonProperStrand	265	chrX	34622909	34623026	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-1.7514
chr4	126707823	126707849	protein_coding	Sfpq	utr3	ENSMUSG00000028820	ProperStrand	340	chr6	119884347	119884431	protein_coding	Wnk1	exon	ENSMUSG00000045962	ProperStrand	221	3	-16.2689
chr15	100004970	100005641	protein_coding	Dip2b	exon	ENSMUSG00000023026	ProperStrand	48	chr15	34370545	34370579	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-3.9653
chr6	122681471	122681561	protein_coding	Slc2a3	exon	ENSMUSG00000003153	ProperStrand	682	chr1	87983864	87983948	snoRNA	ENSMUSG00000077274_SNORA26	.	ENSMUSG00000077274	ProperStrand	361	1	-4.9176
chr4	43441950	43441967	protein_coding	Fam166b	utr5	ENSMUSG00000042788	NonProperStrand	4	chr12	82317769	82317785	protein_coding	Slc8a3	exon	ENSMUSG00000079055	ProperStrand	126	1	-17.5110
chr2	178194847	178194864	protein_coding	Cdh26	exon	ENSMUSG00000039155	NonProperStrand	77	chr19	8800353	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-3.0763
chr18	65322687	65322756	protein_coding	Nedd4l	exon	ENSMUSG00000024589	ProperStrand	44	chr16	23110990	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.3090
chr2	69794116	69794133	protein_coding	Ubr3	exon	ENSMUSG00000044308	ProperStrand	62	chr11	6428038	6428155	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.1331
chr16	50557534	50557634	lincRNA	G730013B05Rik	exon	ENSMUSG00000085617	ProperStrand	3	mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	1	-12.7131
chr4	124462497	124462542	protein_coding	Inpp5b	exon	ENSMUSG00000028894	ProperStrand	9	chr7	29136525	29136548	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-9.8851
chr11	106643262	106643312	protein_coding	Ddx5	exon	ENSMUSG00000020719	ProperStrand	181	chr18	35716841	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	5	-4.7499
chr4	132530098	132530116	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	chr10	42032708	42032777	protein_coding	Lace1	utr3	ENSMUSG00000038302	ProperStrand	12	2	-inf
chr10	116493158	116494272	protein_coding	Cct2	exon	ENSMUSG00000034024	ProperStrand	100	chr17	35087894	35087940	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-4.2199
chr18	36447116	36447206	protein_coding	Pura	exon	ENSMUSG00000043991	ProperStrand	20	chr8	32260348	32260428	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-6.7965
chr1	130275423	130283703	protein_coding	Dars	exon	ENSMUSG00000026356	ProperStrand	28	chr1	162967492	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	3	-11.7175
chr4	131399490	131399506	protein_coding	Mecr	exon	ENSMUSG00000028910	NonProperStrand	109	chr11	97489600	97489617	protein_coding	E130012A19Rik	exon	ENSMUSG00000043439	NonProperStrand	110	1	-10.8968
chr5	134525127	134525146	SINE	B4	B4	chr5B4134524934	ProperStrand	3	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chrX	83824295	83824371	LINE	L1Md_A	L1	chrXL1Md_A83822345	NonProperStrand	1	chr17	24857767	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-inf
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr2	38012954	38012970	protein_coding	Dennd1a	intron	ENSMUSG00000035392	NonProperStrand	128	1	-7.0834
chr5	100855923	100855974	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr5	34112034	34112050	protein_coding	Letm1	exon	ENSMUSG00000005299	NonProperStrand	145	1	-4.9124
chr11	101631877	101632337	protein_coding	Etv4	exon	ENSMUSG00000017724	ProperStrand	10	chr15	79913288	79913313	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	3	-16.5277
chr2	32087832	32087922	protein_coding	Prrc2b	utr3	ENSMUSG00000039262	ProperStrand	344	chr8	32260344	32260424	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-1.5700
chr19	4602238	4602328	protein_coding	Pcx	exon	ENSMUSG00000024892	ProperStrand	70	chr5	130300460	130300540	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.2491
chr9	120039269	120039369	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	chr14	31827493	31827534	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	2	-5.6527
chr12	60141322	60141402	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	chr6	97497429	97497519	snoRNA	ENSMUSG00000064724_SNORA63	.	ENSMUSG00000064724	ProperStrand	35	8	-inf
chr18	50299106	50299206	protein_coding	Hsd17b4	exon	ENSMUSG00000024507	ProperStrand	19	chr1	162965998	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-5.8254
chr8	89368744	89368792	protein_coding	N4bp1	exon	ENSMUSG00000031652	ProperStrand	98	chr2	32631992	32632011	protein_coding	Ptrh1	exon	ENSMUSG00000053746	NonProperStrand	2	1	-20.7365
chr5	145890849	145890939	protein_coding	Pdap1	utr3	ENSMUSG00000029623	ProperStrand	112	chr4	122968636	122968716	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-5.0608
chr18	35931426	35931471	protein_coding	Ube2d2	utr5	ENSMUSG00000091896	ProperStrand	20	chr18	35714183	35714273	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-5.5524
chr6	137991160	137991177	protein_coding	Slc15a5	intron	ENSMUSG00000044378	NonProperStrand	2	chr1	89673566	89673588	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-10.5460
mmu-miR-706	0	17	miRNA	mmu-miR-706	.	mmu-miR-706	ProperStrand	6	chr16	23110896	23111005	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.7876
chr12	85491805	85491883	protein_coding	C130039O16Rik	utr3	ENSMUSG00000042507	ProperStrand	75	chr7	148634702	148634792	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-3.5704
chr7	125303912	125306706	protein_coding	Smg1	exon	ENSMUSG00000030655	ProperStrand	70	chr18	35716809	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-5.3431
chrX	132673816	132673833	protein_coding	Bex4	intron	ENSMUSG00000047844	ProperStrand	13	chr9	15119319	15119428	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	NonProperStrand	3	1	-inf
chr7	29603684	29603727	protein_coding	Hnrnpl	exon	ENSMUSG00000015165	ProperStrand	150	chr17	36000485	36000501	protein_coding	Nrm	exon	ENSMUSG00000059791	ProperStrand	253	1	-8.5934
chr4	58834985	58837104	protein_coding	AI314180	exon	ENSMUSG00000050812	ProperStrand	19	chr1	155287312	155287354	snoRNA	ENSMUSG00000064435_SNORA4	.	ENSMUSG00000064435	ProperStrand	263	3	-20.5324
chr3	85931642	85931659	protein_coding	Sh3d19	utr3	ENSMUSG00000028082	ProperStrand	58	chr15	79913282	79913371	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-6.1993
chrX	7246587	7246687	protein_coding-noncoding	Plp2	utr3	ENSMUSG00000031146	ProperStrand	2	chr9	15118323	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-10.7700
chr18	36700414	36700431	protein_coding	Slc4a9	exon	ENSMUSG00000024485	ProperStrand	13	chr6	87138823	87154416	protein_coding	Antxr1	exon	ENSMUSG00000033420	ProperStrand	70	1	-16.1586
chr13	73788858	73788878	LINE	Lx6	L1	chr13Lx673788408	NonProperStrand	1	chr19	38869531	38869547	protein_coding	Noc3l	exon	ENSMUSG00000024999	NonProperStrand	149	1	-inf
chr11	69481335	69481432	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	chr8	113362431	113362488	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	3	-1.5046
chr6	124354700	124355197	protein_coding	Pex5	exon	ENSMUSG00000005069	ProperStrand	27	chrX	34622908	34622942	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-4.6723
chr12	120089242	120089261	protein_coding	Sp8	utr3	ENSMUSG00000048562	NonProperStrand	5	chr9	120039533	120039612	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	NonProperStrand	24	2	-19.1878
chr3	113438069	113438159	LINE	Lx	L1	chr3Lx113435530	ProperStrand	2	chr4	145155074	145155154	protein_coding	Gm13242	intron	ENSMUSG00000058186	NonProperStrand	3	1	-inf
chr2	109841086	109841142	protein_coding	Lgr4	exon	ENSMUSG00000050199	ProperStrand	27	chr7	117189933	117190023	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.8434
chr10	40069651	40069706	protein_coding	Cdk19	intron	ENSMUSG00000038481	ProperStrand	34	chr9	120038565	120038655	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.0893
chr11	100182124	100182311	protein_coding	Eif1	exon	ENSMUSG00000035530	ProperStrand	115	chr15	82725591	82725636	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	1	-7.2254
chr19	8798744	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	chr4	116827118	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	7	-4.2145
chr15	37915724	38008385	protein_coding	Ubr5	exon	ENSMUSG00000037487	ProperStrand	258	chr18	33954850	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	3	-3.5096
chr7	150772394	150773028	protein_coding	Cars	exon	ENSMUSG00000010755	ProperStrand	62	chr18	12172461	12172477	protein_coding	6030446N20Rik	intron	ENSMUSG00000049411	ProperStrand	235	1	-10.5099
chr5	143666943	143667004	protein_coding	Actb	exon	ENSMUSG00000029580	ProperStrand	446	chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	1	-4.6496
chr11	31269983	31270000	protein_coding	Stc2	utr5	ENSMUSG00000020303	ProperStrand	18	chr7	133940370	133940862	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	1	-10.7785
chr6	30162058	30162074	protein_coding	Ube2h	utr3	ENSMUSG00000039159	ProperStrand	96	chr1	162965531	162965570	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-6.4771
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr17	24665441	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	2	-2.7707
chr11	85878420	85878436	protein_coding	Brip1	utr3	ENSMUSG00000034329	ProperStrand	16	chr7	29136587	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.8105
chr5	100855902	100855955	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr2	180330303	180330340	protein_coding	Ogfr	utr3	ENSMUSG00000049401	ProperStrand	8	3	-21.1312
chr8	13763900	13764647	protein_coding	Cdc16	exon	ENSMUSG00000038416	ProperStrand	28	chr12	17552964	17553044	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-6.5920
chr11	69730268	69730525	protein_coding	Eif5a	utr3	ENSMUSG00000078812	ProperStrand	164	chr16	23111417	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-1.1228
chr2	26767964	26768064	protein_coding-noncoding	Rpl7a	utr5	ENSMUSG00000062647	ProperStrand	53	chr2	26768372	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-5.8451
chr11	104390673	104393054	protein_coding	Cdc27	exon	ENSMUSG00000020687	ProperStrand	24	chr9	15119640	15119720	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.3157
chr1	180181220	180181236	protein_coding	Pppde1	utr3	ENSMUSG00000026502	ProperStrand	27	chr16	23110828	23110972	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.3280
chr15	76538973	76538997	protein_coding	Recql4	exon	ENSMUSG00000033762	ProperStrand	18	chr2	158184092	158184163	snoRNA	ENSMUSG00000064995_SNORA71	.	ENSMUSG00000064995	ProperStrand	430	3	-19.7372
chr10	92199155	92199235	DNA	Tigger10	Tigger	chr10Tigger1092198897	NonProperStrand	1	chr10	95881684	95881774	LTR	RMER15-int	ERVL	chr10RMER15-int95881455	ProperStrand	1	1	-inf
chr6	29644499	29644515	protein_coding	Tspan33	exon	ENSMUSG00000001763	ProperStrand	4	chr1	162965531	162965596	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-8.7752
chr7	148377049	148377070	protein_coding	Hras1	utr3	ENSMUSG00000025499	ProperStrand	17	chr11	69481335	69481431	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-9.2482
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr7	134671467	134671518	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-4.0328
chr11	121084242	121084332	protein_coding	BC017643	utr3	ENSMUSG00000039294	ProperStrand	16	chr18	35716764	35716844	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.5854
chr1	152231432	152231449	protein_coding-noncoding	BC003331	utr3	ENSMUSG00000006010	NonProperStrand	6	chr1	71643958	71644013	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	1	-12.5850
mmu-miR-6238	1	20	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr17	24857716	24857807	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	5	-3.8292
chr6	28476960	28477626	protein_coding	Snd1	exon	ENSMUSG00000001424	ProperStrand	210	chr8	107824309	107824389	protein_coding	E2f4	exon	ENSMUSG00000014859	ProperStrand	32	2	-18.9061
chr7	54441837	54441889	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	chr7	16524110	16524160	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	2	-12.7758
chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	chr8	59991941	59991966	protein_coding	Hmgb2	exon	ENSMUSG00000054717	ProperStrand	184	1	-7.8348
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	83497273	83498244	protein_coding	Zc3h15	exon	ENSMUSG00000027091	ProperStrand	37	1	-5.3993
chr11	77318203	77318220	protein_coding	Git1	exon	ENSMUSG00000011877	ProperStrand	95	chr14	76247724	76247752	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-3.3185
chr13	28843546	28843562	lincRNA	2610307P16Rik	intron	ENSMUSG00000085936	ProperStrand	154	chr11	62416951	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-4.2211
chr9	66299090	66299126	protein_coding	Herc1	exon	ENSMUSG00000038664	ProperStrand	81	chr4	131865389	131865479	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-3.4448
chr8	87196461	87196551	protein_coding	Nacc1	utr3	ENSMUSG00000001910	ProperStrand	130	chr11	97642980	97643060	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.2682
chrX	84483710	84483741	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr14	79601059	79601159	protein_coding	1300010F03Rik	utr3	ENSMUSG00000058997	ProperStrand	29	1	-9.7135
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr14	105550612	105550732	protein_coding	Rbm26	exon	ENSMUSG00000022119	ProperStrand	60	6	-22.7399
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr5	74489564	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	4	-5.7233
chr13	97266647	97266664	protein_coding	Polk	exon	ENSMUSG00000021668	NonProperStrand	25	chr18	35716696	35716762	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.7263
chr13	93209562	93209578	protein_coding	Ankrd34b	exon	ENSMUSG00000045034	NonProperStrand	28	chr16	23110827	23110851	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.1386
chr8	86463748	86463848	protein_coding	Lphn1	utr3	ENSMUSG00000013033	ProperStrand	221	chr8	73419711	73419786	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-3.3490
chr18	85139704	85139730	protein_coding	Fbxo15	intron	ENSMUSG00000034391	ProperStrand	23	chr16	23111394	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.7951
chr5	115750568	115750627	protein_coding	Dynll1	exon	ENSMUSG00000009013	ProperStrand	6	chr16	23110970	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.7876
chr11	59221214	59221298	protein_coding	Snap47	exon	ENSMUSG00000009894	ProperStrand	19	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-5.8137
chr7	5028652	5028670	protein_coding	U2af2	intron	ENSMUSG00000030435	ProperStrand	103	chr10	23505152	23505230	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-2.1730
chr4	132530098	132530117	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	chr7	13896638	13896738	protein_coding	Lig1	utr3	ENSMUSG00000056394	ProperStrand	89	8	-inf
chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	2	-6.4643
chr14	51460950	51460966	protein_coding	Tep1	exon	ENSMUSG00000006281	ProperStrand	37	chr16	23111383	23111423	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.9851
chr14	30913954	30913971	protein_coding	Cacna1d	exon	ENSMUSG00000015968	ProperStrand	16	chr17	35299507	35299576	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-7.4021
chr4	129989668	129991237	protein_coding	Fabp3	exon	ENSMUSG00000028773	ProperStrand	93	chr5	125509151	125509168	protein_coding	Ncor2	exon	ENSMUSG00000029478	ProperStrand	377	2	-13.8976
chr19	6373708	6374064	protein_coding	Sf1	exon	ENSMUSG00000024949	ProperStrand	251	chr5	74489629	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-1.3710
chr2	125601417	125608374	protein_coding	Secisbp2l	exon	ENSMUSG00000035093	ProperStrand	26	chr7	116663634	116663714	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.0328
chr15	75895756	75896561	protein_coding	Scrib	exon	ENSMUSG00000022568	ProperStrand	154	chr17	6232006	6232022	protein_coding	Tulp4	exon	ENSMUSG00000034377	NonProperStrand	265	1	-8.4486
chr5	130487393	130487473	protein_coding	Asl	utr3	ENSMUSG00000025533	ProperStrand	6	chr11	97642952	97643042	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-6.9580
chr10	127521414	127521514	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr1	129301648	129301666	protein_coding	Mgat5	intron	ENSMUSG00000036155	ProperStrand	33	1	-9.8704
chr11	72261459	72263233	protein_coding	Mybbp1a	exon	ENSMUSG00000040463	ProperStrand	279	chr16	23111374	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	7	-2.1121
chr2	145076803	145209256	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	chr7	51505224	51505308	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	3	-7.1672
chr2	90235303	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	60926829	60926880	protein_coding	Sfxn4	intron	ENSMUSG00000063698	ProperStrand	1	1	-inf
chr3	144260263	144260353	protein_coding	Sep15	utr3	ENSMUSG00000037072	ProperStrand	19	chr17	24857716	24857796	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	5	-18.0500
chr2	179911257	179911318	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr2	91099050	91099067	protein_coding	Pacsin3	intron	ENSMUSG00000027257	ProperStrand	5	2	-20.4589
chr11	42440243	42440259	protein_coding	Gabrb2	exon	ENSMUSG00000007653	ProperStrand	248	chr10	60895631	60895658	protein_coding	Eif4ebp2	utr3	ENSMUSG00000020091	ProperStrand	39	1	-11.3366
chr19	8895042	8895142	protein_coding	Hnrnpul2	exon	ENSMUSG00000071659	ProperStrand	93	chr11	101466303	101466351	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	1	-7.9955
chr15	25718824	25718924	protein_coding	Myo10	intron	ENSMUSG00000022272	ProperStrand	168	chr2	26493366	26493393	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-1.9461
chr3	108597860	108600373	protein_coding	Stxbp3a	exon	ENSMUSG00000027882	ProperStrand	4	chr3	94863639	94863655	protein_coding	Pip5k1a	utr3	ENSMUSG00000028126	NonProperStrand	7	3	-inf
chr19	8963032	8963048	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	chr7	116664870	116664924	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-0.9524
chrX	131089038	131089055	protein_coding	Btk	exon	ENSMUSG00000031264	NonProperStrand	1	chr19	8798484	8798524	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-inf
chr6	146991344	146991379	protein_coding	Mrps35	exon	ENSMUSG00000040112	ProperStrand	15	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-10.9588
chr6	131318528	131320347	protein_coding	Csda	exon	ENSMUSG00000030189	ProperStrand	86	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-4.5176
chr1	36851002	36851663	protein_coding	Tmem131	exon	ENSMUSG00000026116	ProperStrand	129	chr5	121655031	121655121	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-4.2167
chr1	138382212	138382230	protein_coding	Kif14	intron	ENSMUSG00000041498	NonProperStrand	36	chr4	131866155	131866245	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-4.6333
chr3	82707847	82707863	antisense	4930564K09Rik	.	ENSMUSG00000086273	ProperStrand	48	chr8	73419713	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.5376
chr17	56582556	56582574	protein_coding	Ptprs	intron	ENSMUSG00000013236	ProperStrand	152	chr10	63552101	63552119	protein_coding	Lrrtm3	exon	ENSMUSG00000042846	ProperStrand	63	1	-11.3497
chr9	70960077	70960093	protein_coding	Aqp9	exon	ENSMUSG00000032204	NonProperStrand	118	chr4	138576794	138576810	protein_coding	Tmco4	exon	ENSMUSG00000041143	ProperStrand	47	1	-12.4493
chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	chr19	8798740	8798812	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-1.2651
chr6	90686907	90686924	protein_coding	Iqsec1	intron	ENSMUSG00000034312	ProperStrand	23	chr2	59637701	59637801	protein_coding	Tanc1	exon	ENSMUSG00000035168	ProperStrand	80	1	-14.6694
chr12	75033370	75033386	lincRNA	Gm15283	exon	ENSMUSG00000087700	ProperStrand	30	chr16	23111706	23111754	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.0878
chr5	131967025	131967043	protein_coding	Auts2	intron	ENSMUSG00000029673	ProperStrand	71	chr8	13416896	13416912	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-6.1219
mmu-miR-1949	0	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr19	8963030	8963133	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	7	-0.8467
chr3	94664631	94664705	protein_coding	Pogz	intron	ENSMUSG00000038902	ProperStrand	65	chr10	90581103	90581193	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-4.6532
chr17	46663594	46812061	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr11	6428036	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	4	-2.2739
chr7	38354919	38354935	protein_coding	Zfp536	exon	ENSMUSG00000043456	NonProperStrand	236	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-3.2425
chr5	124232912	124236154	protein_coding	Kntc1	exon	ENSMUSG00000029414	ProperStrand	27	chr9	15118323	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	6	-inf
chr7	116664020	116665134	protein_coding	Rpl27a	exon	ENSMUSG00000046364	ProperStrand	149	chr11	6428076	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-4.7489
chr11	4970652	4970693	protein_coding	Ewsr1	exon	ENSMUSG00000009079	ProperStrand	248	chr11	68887042	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-1.6755
chr4	116839691	116839962	protein_coding	Kif2c	exon	ENSMUSG00000028678	ProperStrand	32	chr15	98350149	98350229	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	14	-20.6556
chr13	51244351	51244442	protein_coding	Spin1	exon	ENSMUSG00000021395	ProperStrand	56	chr18	73693165	73693183	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-5.6591
chr8	72438497	72438587	protein_coding	Gatad2a	exon	ENSMUSG00000036180	ProperStrand	112	chr16	23110470	23110550	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.4703
chr15	77597977	77597993	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr7	148141001	148141060	protein_coding	Ifitm2	exon	ENSMUSG00000060591	ProperStrand	25	1	-10.5760
chr3	88983051	88983096	protein_coding	Scamp3	exon	ENSMUSG00000028049	ProperStrand	32	chr10	23505152	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-3.9487
chr4	128867196	128867212	protein_coding	Yars	exon	ENSMUSG00000028811	ProperStrand	131	chr15	78939631	78939647	protein_coding	Micall1	utr5	ENSMUSG00000033039	ProperStrand	48	1	-12.1955
chr9	92501401	92501421	protein_coding	Plod2	exon	ENSMUSG00000032374	ProperStrand	52	chr9	78328122	78328180	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-6.6177
chrX	84483703	84483725	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr9	40612838	40612920	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	3	-10.8386
chr13	120252191	120252208	protein_coding	4833420G17Rik	intron	ENSMUSG00000062822	ProperStrand	49	chr18	73693166	73693187	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-5.9216
chr11	32635308	32635327	protein_coding	Fbxw11	exon	ENSMUSG00000020271	NonProperStrand	31	chr2	153050783	153050799	protein_coding	Tspyl3	exon	ENSMUSG00000074671	ProperStrand	228	1	-11.9702
chr16	8663786	8664386	protein_coding	Carhsp1	exon	ENSMUSG00000008393	ProperStrand	15	chr17	75045959	75045976	protein_coding	Birc6	exon	ENSMUSG00000024073	NonProperStrand	36	1	-17.1435
chr1	168029380	168029462	protein_coding	Dusp27	exon	ENSMUSG00000026564	ProperStrand	47	chr2	26493366	26493456	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	29	-inf
chr1	91188602	91188682	LINE	L1_Mus2	L1	chr1L1_Mus291188479	NonProperStrand	1	chr2	85215908	85215998	LINE	L1_Mus2	L1	chr2L1_Mus285215793	NonProperStrand	1	1	-inf
chr2	129998643	129998715	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr4	131908685	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	24	-4.8800
chr18	35716866	35716884	lincRNA	Snhg4	intron	ENSMUSG00000090430	ProperStrand	270	chr16	15556616	15577137	protein_coding	Ube2v2	exon	ENSMUSG00000022674	ProperStrand	10	2	-19.4892
chr2	112202775	112202837	protein_coding	Slc12a6	utr3	ENSMUSG00000027130	ProperStrand	35	chrX	34622906	34622939	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-4.1730
chr19	7095409	7095461	protein_coding	Stip1	utr3	ENSMUSG00000024966	ProperStrand	100	chr16	43886794	43886823	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	1	-7.0581
chr15	84109473	84109489	protein_coding	Parvb	intron	ENSMUSG00000022438	NonProperStrand	6	chr11	97642952	97643052	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-6.9580
chr8	129468789	129468879	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	chr12	110923173	110923209	snoRNA	ENSMUSG00000084487_SNORD113	.	ENSMUSG00000084487	ProperStrand	183	2	-4.2275
chr1	182745764	182745781	antisense	Gm16067	.	ENSMUSG00000073485	ProperStrand	25	chrX	20295200	20295251	protein_coding	Usp11	exon	ENSMUSG00000031066	ProperStrand	29	1	-16.5927
chr2	69305325	69305405	protein_coding	Lrp2	intron	ENSMUSG00000027070	NonProperStrand	8	chr6	92634070	92634160	protein_coding	Prickle2	intron	ENSMUSG00000030020	NonProperStrand	5	1	-18.8889
mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr11	120148960	120148976	protein_coding	Bahcc1	exon	ENSMUSG00000039741	NonProperStrand	268	4	-10.4837
chr7	3581337	3581353	protein_coding	Tfpt	utr5	ENSMUSG00000006335	ProperStrand	19	chr7	51505224	51505258	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	1	-10.4773
chr7	86287909	86290205	protein_coding	Mfge8	exon	ENSMUSG00000030605	ProperStrand	73	chr15	79913288	79913332	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-5.5459
chr17	7959474	7959540	protein_coding-noncoding	Fndc1	utr3	ENSMUSG00000071984	ProperStrand	7	chr7	116663715	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	7	-inf
chrX	133268380	133268460	protein_coding	Morf4l2	exon	ENSMUSG00000031422	ProperStrand	113	chr7	117189971	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.2268
chr7	134177496	134177687	protein_coding	Kif22	exon	ENSMUSG00000030677	ProperStrand	63	chr15	79908930	79908956	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	5	-19.7532
chr1	74902715	74902731	protein_coding	Cdk5r2	exon	ENSMUSG00000090071	NonProperStrand	49	chr4	131865855	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-3.7721
chrX	68468185	68468203	protein_coding	Mtm1	utr5	ENSMUSG00000031337	ProperStrand	10	chr3	68820633	68820733	protein_coding	Smc4	intron	ENSMUSG00000034349	ProperStrand	21	1	-19.0859
chr10	42254961	42254992	protein_coding	Snx3	utr3	ENSMUSG00000019804	ProperStrand	19	chr16	23110901	23110991	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7016
chr3	61169621	61169652	protein_coding	Rap2b	utr3	ENSMUSG00000036894	ProperStrand	12	chr3	123210854	123210972	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	5	-20.9540
chr8	125627095	125627176	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	chr16	23110545	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	4	-3.1938
chr6	29705364	29705380	protein_coding	Smo	exon	ENSMUSG00000001761	ProperStrand	10	chr8	124860278	124860294	protein_coding	Zfpm1	exon	ENSMUSG00000049577	ProperStrand	24	1	-19.3824
chr1	13112482	13112534	protein_coding	Prdm14	exon	ENSMUSG00000042414	NonProperStrand	4	chr1	88247835	88247878	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	NonProperStrand	6	1	-19.4007
chr17	33961614	33962583	protein_coding	Ndufa7	exon	ENSMUSG00000041881	ProperStrand	64	chr15	82980192	82980224	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-7.0109
chr3	103719026	103719045	protein_coding	Rsbn1	exon	ENSMUSG00000044098	ProperStrand	32	chr19	8799581	8799644	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-8.0235
chr11	116535478	116535531	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr16	32683482	32683541	protein_coding	Tnk2	utr3	ENSMUSG00000022791	ProperStrand	86	1	-5.2074
chr8	73905388	73905438	protein_coding	Nr2f6	utr5	ENSMUSG00000002393	ProperStrand	4	chr4	3870303	3870336	protein_coding	Chchd7	intron	ENSMUSG00000042198	ProperStrand	2	1	-inf
chr17	32338092	32338172	protein_coding	Brd4	exon	ENSMUSG00000024002	ProperStrand	121	chr2	152221615	152221705	protein_coding	Sox12	utr3	ENSMUSG00000051817	ProperStrand	31	1	-13.2369
chr16	13796164	13798754	protein_coding	Rrn3	exon	ENSMUSG00000022682	ProperStrand	58	chr7	29136611	29136656	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.4223
chr9	21637355	21637371	protein_coding	Dock6	exon	ENSMUSG00000032198	ProperStrand	155	chr9	50816824	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	1	-9.9038
chr1	155067278	155067309	protein_coding	Lamc1	utr3	ENSMUSG00000026478	ProperStrand	239	chr6	83218442	83218534	protein_coding	Slc4a5	intron	ENSMUSG00000068323	ProperStrand	6	1	-15.3036
chrX	147514682	147520678	protein_coding	Fgd1	exon	ENSMUSG00000025265	ProperStrand	96	chr17	50723076	50723097	protein_coding	Plcl2	intron	ENSMUSG00000038910	NonProperStrand	7	4	-inf
chr2	26493438	26493518	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr8	87211383	87211473	protein_coding	Nacc1	intron	ENSMUSG00000001910	ProperStrand	130	1	-4.6899
chrX	151716663	151720837	protein_coding	Acot9	exon	ENSMUSG00000025287	ProperStrand	1	chr6	94121098	94121120	protein_coding	Magi1	intron	ENSMUSG00000045095	NonProperStrand	47	1	-inf
chr12	104662637	104662746	protein_coding	Ddx24	exon	ENSMUSG00000041645	ProperStrand	34	chr16	23110967	23111010	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.8923
chr11	106851623	106851641	protein_coding	Kpna2	exon	ENSMUSG00000018362	ProperStrand	70	chr11	116938558	116938658	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-5.8559
chr8	107805828	107805845	protein_coding	4931428F04Rik	utr3	ENSMUSG00000014837	NonProperStrand	4	chr14	78912674	78912774	protein_coding	Akap11	exon	ENSMUSG00000022016	ProperStrand	44	1	-20.7530
chr8	13079926	13081283	protein_coding	Pcid2	exon	ENSMUSG00000038542	ProperStrand	13	chr18	35716755	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-16.1153
chr12	112779249	112779284	protein_coding	Eif5	intron	ENSMUSG00000021282	ProperStrand	125	chr11	62418037	62418090	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-4.1456
chrX	98493499	98493516	protein_coding-noncoding	Nlgn3	utr5	ENSMUSG00000031302	ProperStrand	1	chr16	23111394	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-inf
chr2	173051005	173051021	protein_coding	Pmepa1	utr3	ENSMUSG00000038400	NonProperStrand	13	chr5	130295414	130295456	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-8.3148
chr17	74979675	74979760	protein_coding	Birc6	exon	ENSMUSG00000024073	ProperStrand	110	chr16	23110528	23110584	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.4965
chr2	129998643	129998665	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr7	134341340	134341357	protein_coding	Tbc1d10b	utr3	ENSMUSG00000042492	ProperStrand	187	1	-5.8594
chr8	89391570	89391660	protein_coding	N4bp1	intron	ENSMUSG00000031652	ProperStrand	98	chr17	24857762	24857842	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.5223
chr12	82820960	82821050	protein_coding	Map3k9	utr3	ENSMUSG00000042724	ProperStrand	92	chr17	26360446	26360489	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	4	-inf
chr8	114245136	114267591	protein_coding	Bcar1	exon	ENSMUSG00000031955	ProperStrand	44	chr11	74718930	74718952	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	1	-9.6492
chr2	4829164	4829180	protein_coding	Sephs1	utr3	ENSMUSG00000026662	NonProperStrand	271	chr1	72871220	72871261	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	1	-6.4844
chr9	35020435	35020754	protein_coding	Srpr	exon	ENSMUSG00000032042	ProperStrand	54	chr4	131865380	131865470	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-4.2013
chr9	15119980	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	chr1	145626057	145626130	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	4	-10.1999
chr1	116231245	116231261	LTR	ORR1A2	MaLR	chr1ORR1A2116231079	NonProperStrand	5	chr18	60938120	60938152	protein_coding	Rps14	exon	ENSMUSG00000024608	ProperStrand	154	1	-16.5662
chr2	129998643	129998665	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr3	14565743	14565762	protein_coding	Lrrcc1	exon	ENSMUSG00000027550	ProperStrand	39	1	-8.9743
chr2	69193692	69193720	LINE	L1Md_F2	L1	chr2L1Md_F269191897	NonProperStrand	7	chr11	97642952	97643070	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	5	-inf
chr8	67090191	67096337	protein_coding	Cpe	exon	ENSMUSG00000037852	ProperStrand	8	chr16	23111777	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.6662
chr4	46554810	46554826	protein_coding	Coro2a	exon	ENSMUSG00000028337	NonProperStrand	24	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-10.0279
chr13	74471808	74474853	protein_coding	Sdha	exon	ENSMUSG00000021577	ProperStrand	70	chr16	17210492	17210512	protein_coding	Rimbp3	exon	ENSMUSG00000071636	ProperStrand	67	1	-12.7814
chr11	6011736	6099962	protein_coding	Nudcd3	exon	ENSMUSG00000053838	ProperStrand	26	chr16	23111372	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	9	-19.7480
chr9	41877092	41877132	protein_coding	Sorl1	intron	ENSMUSG00000049313	ProperStrand	112	chr1	162966002	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	4	-8.9616
chr11	94188661	94188684	Simple_repeat	(CCCCG)n	Simple_repeat	chr11(CCCCG)n94188658	NonProperStrand	10	chr13	112278554	112278570	protein_coding	Gpbp1	utr5	ENSMUSG00000032745	ProperStrand	85	1	-16.2639
chr8	32239595	32239611	protein_coding	Rnf122	utr3	ENSMUSG00000039328	NonProperStrand	42	chr11	97642952	97643082	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-7.9079
chr1	130263596	130264947	protein_coding	Dars	exon	ENSMUSG00000026356	ProperStrand	28	chr19	8963026	8963116	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-6.1907
chr4	131908371	131908461	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr11	48614367	48614435	snoRNA	ENSMUSG00000064500_SNORD95	.	ENSMUSG00000064500	ProperStrand	100	1	-6.2479
chr2	120300388	120300404	protein_coding	Capn3	intron	ENSMUSG00000079110	NonProperStrand	18	chr7	118219705	118219739	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-6.5317
chr4	117990004	117990094	DNA	MER20B	MER1_type	chr4MER20B117990030	NonProperStrand	1	chr4	117989837	117989917	SINE	PB1D10	Alu	chr4PB1D10117989840	NonProperStrand	1	1	-inf
chr11	78129058	78129405	protein_coding	Spag5	exon	ENSMUSG00000002055	ProperStrand	49	chr4	131908239	131908319	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.7204
chr11	6428035	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr4	130305550	130305621	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	2	-1.3633
chr11	3872086	3872142	protein_coding	Pes1	intron	ENSMUSG00000020430	ProperStrand	49	chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	1	-9.2464
chr12	107065259	107066521	protein_coding	Papola	exon	ENSMUSG00000021111	ProperStrand	67	chr9	15119648	15119693	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-6.4766
chr10	75359822	75360194	protein_coding	Smarcb1	exon	ENSMUSG00000000902	ProperStrand	109	chr18	73693171	73693188	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-4.3724
chr10	126975445	126975462	protein_coding	Lrp1	utr3	ENSMUSG00000040249	NonProperStrand	24	chr9	120037933	120038029	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-6.5078
chr8	94329228	94329246	lincRNA	D230002A01Rik	exon	ENSMUSG00000046413	NonProperStrand	1	chr16	38089975	38089992	protein_coding	Gsk3b	utr5	ENSMUSG00000022812	ProperStrand	80	1	-inf
chr13	107783261	107783303	protein_coding	Kif2a	exon	ENSMUSG00000021693	ProperStrand	32	chr19	8800355	8800444	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-4.7207
chr9	15119281	15119298	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	chr5	74489645	74489677	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-0.8908
chr16	98172651	98172751	protein_coding	Zfp295	exon	ENSMUSG00000046962	ProperStrand	63	chr19	8963031	8963084	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.1938
mmu-miR-294-3p	1	22	miRNA	mmu-miR-294-3p	.	mmu-miR-294-3p	ProperStrand	35	chr18	35716787	35716878	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-5.3687
chr3	153575089	153575111	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	chr12	17552949	17553047	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-0.9930
chr19	44377982	44380304	protein_coding	Scd2	utr3	ENSMUSG00000025203	ProperStrand	219	chr2	22444121	22444788	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	2	-8.5734
chr2	167836657	167836681	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	chr9	15118323	15118380	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-2.4258
chr10	62269107	62269208	protein_coding	Tet1	utr3	ENSMUSG00000047146	ProperStrand	286	chr7	50873216	50873236	protein_coding	Zfp819	exon	ENSMUSG00000055102	ProperStrand	2	1	-17.9538
chr3	90310139	90311512	protein_coding	2500003M10Rik	utr5	ENSMUSG00000001017	ProperStrand	28	chr11	97642992	97643072	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.8483
chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	chr7	52303869	52303908	protein_coding	Prr12	exon	ENSMUSG00000046574	ProperStrand	86	1	-7.3914
chr8	34926743	34926768	protein_coding	Rbpms	intron	ENSMUSG00000031586	ProperStrand	58	chr16	23110470	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-6.6558
chr4	46554809	46554826	protein_coding	Coro2a	exon	ENSMUSG00000028337	NonProperStrand	24	chr1	141319671	141319687	protein_coding	Zbtb41	utr5	ENSMUSG00000033964	NonProperStrand	145	1	-13.3971
chr11	120208226	120208286	protein_coding	Actg1	exon	ENSMUSG00000062825	ProperStrand	178	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	10	-13.9614
chrX	5684093	5684129	rRNA	n-R5s2	.	ENSMUSG00000075918	ProperStrand	25	chr11	106362642	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-9.1656
chr5	118477951	118477967	protein_coding	Tesc	exon	ENSMUSG00000029359	ProperStrand	114	chr8	122480590	122480638	protein_coding	Usp10	exon	ENSMUSG00000031826	ProperStrand	98	1	-11.0384
chr7	134169081	134169171	protein_coding	Maz	utr5	ENSMUSG00000030678	ProperStrand	42	chr7	116663697	116663759	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.1409
chr2	37206564	37206653	protein_coding	Pdcl	utr3	ENSMUSG00000009030	ProperStrand	32	chr11	97643012	97643092	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.5978
chr8	89365862	89365927	protein_coding	N4bp1	utr3	ENSMUSG00000031652	ProperStrand	98	chr11	63892839	63892856	protein_coding	Cox10	exon	ENSMUSG00000042148	NonProperStrand	187	1	-10.0476
chr18	75162369	75162407	protein_coding	Rpl17	exon	ENSMUSG00000062328	ProperStrand	90	chr19	8963026	8963080	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.6294
chr6	115511450	115515910	protein_coding	Tsen2	exon	ENSMUSG00000042389	ProperStrand	2	chr11	69483193	69483237	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-9.6187
chr1	165860076	165860093	protein_coding	Scyl3	utr5	ENSMUSG00000026584	NonProperStrand	5	chr12	29319134	29319194	protein_coding	Rps7	exon	ENSMUSG00000061477	ProperStrand	129	1	-16.9292
chr14	93575981	93575998	protein_coding	Pcdh9	intron	ENSMUSG00000055421	ProperStrand	59	chr9	15118322	15118373	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.4975
chr3	88122325	88122346	protein_coding	Cct3	exon	ENSMUSG00000001416	ProperStrand	82	chr7	29136525	29136567	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-5.1925
chr19	46022236	46022252	protein_coding	9130011E15Rik	intron	ENSMUSG00000039901	ProperStrand	129	chr4	131865855	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.5328
chr11	100275875	100275892	protein_coding	Leprel4	exon	ENSMUSG00000006931	ProperStrand	32	chr3	123210911	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.1535
chr15	4962082	4962098	protein_coding	C7	utr3	ENSMUSG00000079105	ProperStrand	63	chr16	23111776	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.8263
chr16	38086511	38086528	SINE	B4	B4	chr16B438086421	ProperStrand	1	chr1	34251429	34252682	protein_coding	Dst	utr5	ENSMUSG00000026131	ProperStrand	461	1	-inf
chr17	35972831	35972911	protein_coding	Tubb5	exon	ENSMUSG00000001525	ProperStrand	624	chrX	71517864	71517954	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-2.1822
chr13	55640990	55642991	protein_coding	Fam193b	utr3	ENSMUSG00000021495	ProperStrand	51	chr18	35716789	35716869	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.4421
chr16	87594620	87594638	protein_coding	ORF63	exon	ENSMUSG00000025610	NonProperStrand	23	chr5	121655016	121655125	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	5	-inf
chr1	36750083	36750163	protein_coding	Cox5b	utr3	ENSMUSG00000061518	ProperStrand	43	chr3	68889087	68889177	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-3.8727
chr2	29623529	29623591	protein_coding	Trub2	intron	ENSMUSG00000039826	ProperStrand	2	chr19	8800454	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-10.8391
chr9	65127126	65127142	protein_coding	Cilp	exon	ENSMUSG00000042254	ProperStrand	212	chr17	24858599	24858628	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	1	-7.1357
chr2	90235290	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	9932550	9932625	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	3	-1.3022
chr13	9833555	9833615	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr8	110108141	110108811	protein_coding	Psmd7	exon	ENSMUSG00000039067	ProperStrand	36	4	-17.9732
chr11	100649800	100650067	protein_coding	Stat5b	exon	ENSMUSG00000020919	ProperStrand	7	chr10	23505152	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-5.0629
chr1	59768155	59768245	protein_coding	Nop58	utr3	ENSMUSG00000026020	ProperStrand	104	chr5	108334201	108334281	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	4	-12.3811
chr16	14110754	14110809	protein_coding	4921513D23Rik	utr3	ENSMUSG00000060657	ProperStrand	47	chr7	117189901	117189933	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.7835
chr4	44769537	44769570	protein_coding	Zcchc7	utr5	ENSMUSG00000035649	ProperStrand	6	chr8	59048088	59048197	protein_coding	Fbxo8	exon	ENSMUSG00000038206	ProperStrand	2	1	-inf
chr2	130107163	130109513	protein_coding	Idh3b	exon	ENSMUSG00000027406	ProperStrand	146	chr3	123210854	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	6	-7.0760
chr13	53285957	53285978	protein_coding	Ror2	intron	ENSMUSG00000021464	ProperStrand	46	chr10	90581104	90581194	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	4	-16.4532
chr4	140755537	140755617	protein_coding	Fbxo42	exon	ENSMUSG00000028920	ProperStrand	91	chr17	24665429	24802985	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-4.1446
chr2	129627400	129627416	protein_coding	Stk35	exon	ENSMUSG00000037885	NonProperStrand	10	chr17	39985471	39985499	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-9.5626
chr16	18240912	18240937	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	chr12	106269282	106269352	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	3	-2.6354
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr5	65782034	65782061	protein_coding	Rpl9	exon	ENSMUSG00000047215	ProperStrand	113	1	-7.5269
chr18	60973669	60973712	protein_coding	Tcof1	utr3	ENSMUSG00000024613	ProperStrand	68	chr9	15119310	15119400	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-4.8665
chr5	89383967	89457318	protein_coding	Slc4a4	exon	ENSMUSG00000060961	NonProperStrand	195	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-3.5900
chr17	46461862	46464735	protein_coding	Abcc10	exon	ENSMUSG00000032842	NonProperStrand	5	chr2	130101971	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	2	-16.7334
chr17	39979945	39980126	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr7	117189961	117190063	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	8	-1.7170
chr9	15119286	15119392	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	chr2	32530734	32530769	snoRNA	ENSMUSG00000093277_AL772271.2	.	ENSMUSG00000093277	ProperStrand	23	4	-19.3022
chr17	35975090	35975114	protein_coding	Tubb5	utr5	ENSMUSG00000001525	ProperStrand	624	chr9	103401280	103401296	protein_coding	Tmem108	exon	ENSMUSG00000042757	NonProperStrand	323	1	-5.3032
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr11	68886928	68887057	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	2	-1.3861
chr7	30074412	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr1	162966815	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-3.5026
chrX	7752870	7752886	protein_coding	Tbc1d25	exon	ENSMUSG00000039201	ProperStrand	126	chr1	162967735	162967780	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	1	-8.7607
chr11	97641535	97641591	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	3	-3.3708
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr9	44196101	44196170	protein_coding	Hyou1	exon	ENSMUSG00000032115	ProperStrand	145	1	-7.0812
chr18	62059015	62059033	protein_coding	Ablim3	intron	ENSMUSG00000032735	ProperStrand	9	chr4	131865867	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.2544
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr12	105709750	105709766	protein_coding	Gsc	exon	ENSMUSG00000021095	NonProperStrand	12	1	-7.6663
chr5	31375619	31375945	protein_coding	Cad	exon	ENSMUSG00000013629	ProperStrand	260	chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	3	-18.4145
chr12	50486369	50486387	protein_coding	3110039M20Rik	exon	ENSMUSG00000089922	NonProperStrand	2	chr5	121655029	121655090	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-11.0755
chr12	33638882	33638900	protein_coding	Sypl	intron	ENSMUSG00000020570	ProperStrand	18	chr5	130300419	130300476	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.7422
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr12	55072393	55072409	protein_coding	Npas3	intron	ENSMUSG00000021010	ProperStrand	15	1	-10.6054
chr16	17845136	17849716	protein_coding	Dgcr2	exon	ENSMUSG00000003166	ProperStrand	45	chr1	34616846	34616867	protein_coding	Prss40	intron	ENSMUSG00000037529	ProperStrand	4	4	-inf
chr2	169059344	169059361	LTR	RMER21A	ERV1	chr2RMER21A169059326	NonProperStrand	4	chr9	120038493	120038547	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-8.5118
chr7	25988786	25988815	protein_coding	Dedd2	exon	ENSMUSG00000054499	ProperStrand	5	chr19	8799853	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	3	-20.0188
chr7	16534823	16534839	protein_coding	Ehd2	utr3	ENSMUSG00000074364	NonProperStrand	197	chr12	88778630	88778711	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	4	-13.4266
chr5	135529883	135529988	snoRNA	ENSMUSG00000088008_SCARNA20	.	ENSMUSG00000088008	ProperStrand	139	chr5	92485086	92485114	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	3	-15.8999
chr11	75267950	75268040	protein_coding	Wdr81	utr5	ENSMUSG00000045374	ProperStrand	6	chr9	40612852	40612921	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	1	-14.2965
chr9	88419024	88419041	SINE	B4	B4	chr9B488418988	ProperStrand	75	chr9	65507869	65507943	protein_coding	Rbpms2	utr3	ENSMUSG00000032387	ProperStrand	85	1	-12.1644
chr5	99443584	99443601	protein_coding	Prkg2	intron	ENSMUSG00000029334	NonProperStrand	57	chr19	8798484	8798513	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-5.3114
chr15	84757806	84757864	protein_coding	Nup50	utr5	ENSMUSG00000016619	ProperStrand	39	chr10	23505178	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	7	-14.7497
chr9	26906297	26906313	protein_coding	Jam3	exon	ENSMUSG00000031990	ProperStrand	30	chr9	15119631	15119693	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.8898
chr4	57706987	57707003	protein_coding	Palm2	intron	ENSMUSG00000090053	NonProperStrand	187	chr4	131865855	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-1.5913
chr17	46786010	46786875	protein_coding	Mrpl2	exon	ENSMUSG00000002767	ProperStrand	35	chr4	131908365	131908445	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.2627
chr9	42223414	42223514	protein_coding	Tbcel	utr3	ENSMUSG00000037287	ProperStrand	15	chr14	79411173	79411214	protein_coding	1300010F03Rik	intron	ENSMUSG00000058997	ProperStrand	29	6	-inf
chr7	88529496	88529520	protein_coding	Cpeb1	intron	ENSMUSG00000025586	NonProperStrand	29	chr4	131866176	131866291	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-5.0536
chr15	99984637	99984654	protein_coding	Dip2b	exon	ENSMUSG00000023026	NonProperStrand	10	chr9	70960076	70960092	protein_coding	Aqp9	exon	ENSMUSG00000032204	NonProperStrand	118	1	-15.6212
chr4	141531113	141531131	protein_coding	Fhad1	intron	ENSMUSG00000051435	NonProperStrand	8	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-11.8681
chr17	95160910	95218243	Satellite	MMSAT4	Satellite	chr17MMSAT495216724	NonProperStrand	14	chr10	23505152	23505268	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-16.3050
chrX	12184167	12186011	protein_coding	Atp6ap2	exon	ENSMUSG00000031007	ProperStrand	29	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.1645
chr12	87859973	87860051	protein_coding	Esrrb	utr3	ENSMUSG00000021255	ProperStrand	254	chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	1	-5.9777
chr4	25667956	25667974	protein_coding	Fut9	intron	ENSMUSG00000055373	NonProperStrand	4	chr17	24665465	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-10.5499
chr3	33713610	33713626	protein_coding	Ccdc39	exon	ENSMUSG00000027676	ProperStrand	106	chr2	59629874	59629895	protein_coding	Tanc1	exon	ENSMUSG00000035168	ProperStrand	80	1	-11.5914
chr11	77698665	77698735	protein_coding	Pipox	intron	ENSMUSG00000017453	ProperStrand	11	chr4	122970475	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	3	-20.5761
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	83104086	83105785	protein_coding	Psip1	exon	ENSMUSG00000028484	ProperStrand	104	1	-3.4329
chr16	89788802	89788818	protein_coding	Tiam1	utr3	ENSMUSG00000002489	NonProperStrand	26	chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-9.4232
chr11	22901638	22901690	protein_coding	Cct4	exon	ENSMUSG00000007739	ProperStrand	81	chr8	32260335	32260385	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-4.0594
chrX	70925031	70925058	protein_coding	Slc6a8	exon	ENSMUSG00000019558	ProperStrand	47	chr18	35714170	35714242	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-3.8965
chr4	40937871	40938823	protein_coding	Nfx1	exon	ENSMUSG00000028423	ProperStrand	39	chr10	23505163	23505253	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.8710
chr7	52309977	52309993	protein_coding	Prrg2	exon	ENSMUSG00000007837	NonProperStrand	281	chr1	162965531	162965600	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-0.8695
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	100966289	100966307	SINE	B4A	B4	chr9B4A100966214	ProperStrand	51	1	-4.7748
chr2	29786564	29786580	protein_coding	Odf2	utr3	ENSMUSG00000026790	NonProperStrand	6	chr18	35716810	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-15.8619
chr17	46685460	46685476	protein_coding	Srf	utr3	ENSMUSG00000015605	ProperStrand	11	chr14	14731050	14731067	protein_coding	Gm281	intron	ENSMUSG00000084902	ProperStrand	23	1	-18.6193
chr6	136772952	136773023	protein_coding	Wbp11	intron	ENSMUSG00000030216	ProperStrand	87	chr11	98878344	98878376	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-5.5550
chr15	98637386	98637402	protein_coding	Ddn	exon	ENSMUSG00000059213	NonProperStrand	2	chr16	23110897	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr5	34691750	34691786	protein_coding	Rnf4	intron	ENSMUSG00000029110	ProperStrand	27	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.7994
chr4	37208526	37208544	lincRNA	Gm12374	intron	ENSMUSG00000086026	ProperStrand	1	chr11	6428092	6428154	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-inf
chr7	34992744	34993285	protein_coding	Gpi1	exon	ENSMUSG00000036427	ProperStrand	288	chr2	26493366	26493406	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	3	-3.5673
chr19	9026640	9026729	protein_coding	Mta2	utr3	ENSMUSG00000071646	ProperStrand	70	chr8	129468746	129468780	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-4.1211
chr9	78327145	78328374	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr7	116663636	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	16	-0.9195
chr2	32818834	32818934	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	chr10	107800779	107800854	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	1	-0.9727
chr7	52378458	52378480	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	chr18	35714144	35714261	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	4	-1.6156
chr18	75161137	75161173	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	chr2	130101985	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-1.5410
chr14	78121067	78121157	protein_coding	Enox1	utr3	ENSMUSG00000022012	ProperStrand	16	chr7	117189973	117190053	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-5.8807
chrX	34337113	34337311	protein_coding	Slc25a5	exon	ENSMUSG00000016319	ProperStrand	55	chr10	23505152	23505237	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-2.5816
chr16	75539358	75539374	SINE	B3A	B2	chr16B3A75539263	ProperStrand	1	chr18	75161108	75161170	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	1	-inf
chr4	131908689	131908771	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	chr4	86232356	86232488	snoRNA	ENSMUSG00000088958_Scarna8	.	ENSMUSG00000088958	ProperStrand	366	7	-1.0784
chr13	40982775	40982791	protein_coding	Gcnt2	exon	ENSMUSG00000021360	ProperStrand	31	chr4	131908236	131908296	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.4690
chr2	154389659	154389694	protein_coding	E2f1	exon	ENSMUSG00000027490	ProperStrand	28	chr2	144087332	144087449	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	10	-19.7116
chr10	79651518	79651535	protein_coding	Efna2	exon	ENSMUSG00000003070	NonProperStrand	2	chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	1	-16.8036
chr11	58791685	58791738	protein_coding	Trim11	utr5	ENSMUSG00000020455	ProperStrand	43	chr9	64022855	64022877	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-8.6935
chr9	78023110	78023150	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr5	111214878	111214959	protein_coding	Ulk1	utr3	ENSMUSG00000029512	ProperStrand	92	3	-11.8630
chr7	135755205	135755226	protein_coding	Inpp5f	intron	ENSMUSG00000042105	ProperStrand	5	chr5	87680856	87680872	protein_coding	Ugt2b37	exon	ENSMUSG00000057425	NonProperStrand	30	1	-19.7492
chr17	31785654	31785802	protein_coding	U2af1	exon	ENSMUSG00000061613	ProperStrand	17	chr18	73693171	73693189	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	2	-12.9100
chr17	68160805	68160895	protein_coding	Lama1	exon	ENSMUSG00000032796	ProperStrand	168	chr8	13876097	13876177	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-5.1221
chr10	96612609	96612628	LTR	MTEa	MaLR	chr10MTEa96612421	NonProperStrand	1	chr15	34370545	34370606	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-inf
chr13	20621251	20621268	protein_coding	Elmo1	intron	ENSMUSG00000041112	NonProperStrand	34	chr19	8963086	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.2720
chr5	117835463	117836807	protein_coding	Rfc5	exon	ENSMUSG00000029363	ProperStrand	15	chr7	52378395	52378481	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	1	-11.3190
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr1	88252836	88252901	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-1.1990
chr2	44844628	44844644	protein_coding	Zeb2	exon	ENSMUSG00000026872	ProperStrand	12	chr2	145077955	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-10.9964
chr5	92483008	92483092	protein_coding	G3bp2	utr3	ENSMUSG00000029405	ProperStrand	78	chr11	55109944	55109962	protein_coding	Fat2	intron	ENSMUSG00000055333	ProperStrand	39	4	-19.8511
chr19	8963032	8963048	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-2.8983
chr2	93765372	93765391	SINE	B4A	B4	chr2B4A93765305	ProperStrand	1	chr19	29365694	29365710	protein_coding	Jak2	exon	ENSMUSG00000024789	ProperStrand	4	1	-inf
chr9	103255925	103255953	protein_coding	Cdv3	utr3	ENSMUSG00000032803	ProperStrand	68	chr4	131908809	131908869	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.0584
chr11	42440243	42440259	protein_coding	Gabrb2	exon	ENSMUSG00000007653	ProperStrand	248	chr3	119486284	119486302	protein_coding	Ptbp2	utr5	ENSMUSG00000028134	ProperStrand	3	1	-16.8749
chr7	87674318	87674336	protein_coding	Blm	intron	ENSMUSG00000030528	NonProperStrand	19	chr2	29922171	29922231	protein_coding	Set	utr5	ENSMUSG00000054766	ProperStrand	167	1	-13.5918
chr1	59545918	59545958	lincRNA	Gm17453	exon	ENSMUSG00000092149	NonProperStrand	1	chr13	107737212	107737228	protein_coding	Dimt1	utr5	ENSMUSG00000021692	ProperStrand	185	1	-inf
chr9	106791191	106791245	protein_coding	Manf	utr3	ENSMUSG00000032575	ProperStrand	63	chr9	15119302	15119392	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-5.0141
chr3	137952878	137952894	antisense	Gm16559	.	ENSMUSG00000089635	ProperStrand	1	chr4	131865855	131865981	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr5	23948936	23949018	protein_coding	Fastk	intron	ENSMUSG00000028959	ProperStrand	13	chr5	108334224	108334314	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	2	-12.6802
chr10	80939631	80945220	protein_coding	Celf5	exon	ENSMUSG00000034818	ProperStrand	16	chr5	121655062	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-6.3246
chr4	140545680	140545697	protein_coding	Atp13a2	intron	ENSMUSG00000036622	ProperStrand	39	chr5	121655025	121655125	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.5640
chr11	51416098	51416127	protein_coding	Hnrnpab	exon	ENSMUSG00000020358	ProperStrand	124	chr15	75578185	75578202	protein_coding	Mafa	exon	ENSMUSG00000047591	NonProperStrand	7	1	-16.3343
chr5	100855944	100855974	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr8	109128256	109172917	protein_coding	Cdh1	exon	ENSMUSG00000000303	ProperStrand	283	1	-3.6508
chr11	76057427	76057517	protein_coding	Rnmtl1	exon	ENSMUSG00000038046	ProperStrand	2	chr4	86232407	86232487	snoRNA	ENSMUSG00000088958_Scarna8	.	ENSMUSG00000088958	ProperStrand	366	1	-17.2678
chr17	45705861	45705962	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr4	131866614	131866676	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	1	-2.7461
chr11	74495788	74495832	protein_coding	Pafah1b1	exon	ENSMUSG00000020745	ProperStrand	20	chr12	77644445	77644463	protein_coding	Plekhg3	intron	ENSMUSG00000052609	ProperStrand	19	1	-17.9676
chr17	46917427	46917496	protein_coding	Rpl7l1	exon	ENSMUSG00000063888	ProperStrand	37	chr9	64022894	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-8.9962
chr3	8953690	8953780	protein_coding	Tpd52	exon	ENSMUSG00000027506	ProperStrand	37	chr1	89673532	89673612	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-4.1636
chr7	3435642	3435659	protein_coding	Cacng6	exon	ENSMUSG00000078815	NonProperStrand	1	chr12	17552949	17552983	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-inf
chr5	92848907	92848924	protein_coding	Nup54	intron	ENSMUSG00000034826	ProperStrand	16	chr16	23110828	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.9771
chr5	115225247	115225279	protein_coding	Ankrd13a	exon	ENSMUSG00000041870	ProperStrand	22	chr17	39985429	39985529	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-7.9368
chr6	142315261	142315289	protein_coding	Recql	exon	ENSMUSG00000030243	ProperStrand	12	chr19	8800379	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-6.6789
chr2	76245295	76245385	protein_coding-noncoding	Osbpl6	utr5	ENSMUSG00000042359	NonProperStrand	1	chr2	76245078	76245168	protein_coding	Osbpl6	intron	ENSMUSG00000042359	NonProperStrand	4	1	-inf
chrX	72661762	72661783	protein_coding	Mtcp1	utr5	ENSMUSG00000090110	ProperStrand	19	chr11	69483195	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.5692
chrX	12693855	12698606	protein_coding	Usp9x	exon	ENSMUSG00000031010	ProperStrand	174	chr6	70794802	70794818	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	1	-9.2873
chr7	13610372	13610664	protein_coding	Trim28	exon	ENSMUSG00000005566	ProperStrand	296	chr9	15119967	15119995	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	3	-10.0031
chr8	47294710	47294763	protein_coding	Slc25a4	exon	ENSMUSG00000031633	ProperStrand	53	chr11	115935746	115937022	protein_coding	Unc13d	exon	ENSMUSG00000057948	ProperStrand	89	1	-12.7715
chr10	7390914	7393431	protein_coding	Nup43	exon	ENSMUSG00000040034	ProperStrand	7	chr5	14252800	14252816	protein_coding	Sema3e	utr3	ENSMUSG00000063531	ProperStrand	125	1	-16.2625
chrX	71589885	71589903	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr7	67123696	67123749	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	1	-6.3984
chr4	18020485	18020501	protein_coding	Mmp16	exon	ENSMUSG00000028226	ProperStrand	55	chr4	131865867	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.9045
chr19	5802062	5802117	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-2.2794
chr10	74608179	74616649	protein_coding	Bcr	exon	ENSMUSG00000009681	ProperStrand	19	chr3	101940332	101940349	protein_coding	Casq2	intron	ENSMUSG00000027861	ProperStrand	9	1	-19.6683
chr5	108333779	108333837	protein_coding	Rpl5	exon	ENSMUSG00000058558	ProperStrand	235	chr11	62418055	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-2.9882
chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	4	-1.7201
chr6	70309748	70309838	LINE	L1_Mus2	L1	chr6L1_Mus270309735	ProperStrand	1	chr9	22955866	22955956	LINE	Lx	L1	chr9Lx22955684	ProperStrand	1	1	-inf
chr9	21483586	21490476	protein_coding	Smarca4	exon	ENSMUSG00000032187	ProperStrand	196	chr9	64025786	64025822	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	1	-6.3284
chr13	23647406	23647427	protein_coding	Hist1h1d	exon	ENSMUSG00000052565	ProperStrand	78	chr7	116663715	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.0734
chr8	3642156	3642172	protein_coding	Stxbp2	intron	ENSMUSG00000004626	NonProperStrand	73	chr11	62416951	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-5.6581
chr14	21834197	21838506	protein_coding	Vcl	utr5	ENSMUSG00000021823	ProperStrand	48	chr10	23505259	23505279	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-2.9082
chr10	80863502	80863537	protein_coding	Nfic	utr3	ENSMUSG00000055053	ProperStrand	69	chr10	23505152	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.0487
chr19	59335933	59337435	protein_coding	Slc18a2	exon	ENSMUSG00000025094	ProperStrand	11	chr9	59526633	59526696	protein_coding	Pkm2	utr3	ENSMUSG00000032294	ProperStrand	1296	1	-10.6283
chr4	134211461	134211482	protein_coding	Man1c1	intron	ENSMUSG00000037306	ProperStrand	22	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.1855
chr17	51059909	51059926	protein_coding	Tbc1d5	exon	ENSMUSG00000023923	NonProperStrand	51	chr1	88247740	88247799	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-5.4134
chrX	12690695	12713648	protein_coding	Usp9x	exon	ENSMUSG00000031010	ProperStrand	174	chr11	6428034	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-2.7016
chr7	52157007	52161131	protein_coding	Ap2a1	exon	ENSMUSG00000060279	ProperStrand	193	chr7	29136575	29136631	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-1.4676
chrX	148704939	148704977	protein_coding	Kdm5c	exon	ENSMUSG00000025332	ProperStrand	139	chr8	73419657	73419757	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-3.1605
chr5	28721028	28721103	protein_coding	Rbm33	exon	ENSMUSG00000048271	ProperStrand	78	chr8	32260335	32260418	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-4.1305
chrX	103398259	103398647	protein_coding	Pgk1	utr3	ENSMUSG00000062070	ProperStrand	484	chr17	13112452	13112528	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	5	-6.4279
chr1	138178661	138242077	protein_coding	Camsap2	exon	ENSMUSG00000041570	NonProperStrand	116	chr11	106362610	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	3	-13.9900
chr8	107860346	107860362	protein_coding	Fhod1	exon	ENSMUSG00000014778	NonProperStrand	2	chr16	23110852	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr1	63327447	63337232	protein_coding	Zdbf2	utr5	ENSMUSG00000027520	ProperStrand	72	chr12	55797772	55797869	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	1	-7.3340
chr3	88727683	88727699	protein_coding	Dap3	utr3	ENSMUSG00000068921	ProperStrand	58	chr10	41405768	41405789	protein_coding	Ccdc162	intron	ENSMUSG00000075225	NonProperStrand	3	1	-inf
chr5	111082719	111082737	protein_coding	Ddx51	exon	ENSMUSG00000029504	ProperStrand	54	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-7.1926
chr4	32780476	32781478	protein_coding	Mdn1	exon	ENSMUSG00000058006	ProperStrand	184	chr1	162967749	162967783	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	1	-8.0063
chr4	128898616	128898632	protein_coding	C77080	utr3	ENSMUSG00000050390	NonProperStrand	28	chr19	8963026	8963167	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.6314
chr9	62786918	62786998	protein_coding	Pias1	intron	ENSMUSG00000032405	ProperStrand	13	chr3	87470653	87470743	protein_coding	Arhgef11	intron	ENSMUSG00000041977	ProperStrand	16	1	-18.9636
chr4	116277367	116277404	protein_coding	Nasp	exon	ENSMUSG00000028693	ProperStrand	64	chr9	15118323	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	3	-8.3974
chr9	74978189	74978279	protein_coding-noncoding	Myo5a	utr5	ENSMUSG00000034593	ProperStrand	1	chr9	74977671	74977751	protein_coding	Myo5a	intron	ENSMUSG00000034593	ProperStrand	89	1	-inf
chr6	39229498	39229568	Low_complexity	GA-rich	Low_complexity	chr6GA-rich39229469	NonProperStrand	1	chr4	43505652	43505723	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	1	-inf
chr6	91417762	91423357	protein_coding	Chchd4	utr5	ENSMUSG00000034203	ProperStrand	2	chr1	162966019	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-10.9191
chr8	26642758	26642832	protein_coding	Fgfr1	utr5	ENSMUSG00000091895	ProperStrand	16	chr17	13112547	13112587	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	4	-19.0582
chrX	147496802	147496829	protein_coding	Fgd1	intron	ENSMUSG00000025265	ProperStrand	96	chr4	126559848	126566767	protein_coding	Zmym4	exon	ENSMUSG00000042446	ProperStrand	94	1	-11.4665
chr2	38859645	38860307	protein_coding	Rpl35	exon	ENSMUSG00000062997	ProperStrand	68	chr4	131908689	131908789	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-4.8635
chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	chr6	148303919	148304012	protein_coding	Rps4y2	exon	ENSMUSG00000063171	ProperStrand	47	4	-inf
chrX	71533839	71534003	protein_coding	Taz	exon	ENSMUSG00000009995	ProperStrand	59	chr9	60719914	60719930	protein_coding	Uaca	exon	ENSMUSG00000034485	ProperStrand	109	1	-12.1476
chr9	49491222	49491239	protein_coding	Ncam1	intron	ENSMUSG00000039542	NonProperStrand	8	chr2	118455894	118456718	protein_coding	Bub1b	exon	ENSMUSG00000040084	ProperStrand	45	1	-17.8233
chr16	32618816	32619164	protein_coding	Tfrc	exon	ENSMUSG00000022797	ProperStrand	71	chr2	138188029	138188045	protein_coding	Btbd3	intron	ENSMUSG00000062098	NonProperStrand	121	1	-11.5659
chr18	13143741	13144848	protein_coding	Impact	exon	ENSMUSG00000024423	ProperStrand	32	chr17	35087894	35087935	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-6.4384
chr5	77423673	77423867	protein_coding	Srp72	exon	ENSMUSG00000036323	ProperStrand	41	chr3	123210903	123210983	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.7108
chr6	115757109	115757178	protein_coding	Rpl32	exon	ENSMUSG00000057841	ProperStrand	137	chr2	158205269	158205359	snoRNA	ENSMUSG00000064585_SNORA71	.	ENSMUSG00000064585	ProperStrand	418	1	-7.7760
chr7	146684406	146684425	protein_coding	Inpp5a	intron	ENSMUSG00000025477	ProperStrand	166	chr1	72871193	72871268	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	1	-7.4525
chr16	35981714	35981744	antisense	Gm15564	.	ENSMUSG00000086324	ProperStrand	6	chr11	67520792	67520809	protein_coding	Glp2r	utr3	ENSMUSG00000049928	NonProperStrand	4	1	-19.3129
chr2	59808907	59808933	protein_coding	Baz2b	intron	ENSMUSG00000026987	ProperStrand	15	chr4	131908372	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	5	-16.5354
chr17	36097663	36097764	protein_coding	Abcf1	exon	ENSMUSG00000038762	ProperStrand	206	chr2	166888977	166888995	snoRNA	ENSMUSG00000077515_SNORD12	.	ENSMUSG00000077515	ProperStrand	191	1	-8.5210
chr6	82645146	82645218	protein_coding	Pole4	intron	ENSMUSG00000030042	ProperStrand	11	chr4	131908236	131908344	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	7	-19.4235
chr1	90162014	90162088	protein_coding	Hjurp	exon	ENSMUSG00000044783	ProperStrand	110	chr1	181067485	181067503	protein_coding	Smyd3	intron	ENSMUSG00000055067	NonProperStrand	190	1	-9.7844
chr15	78982085	78982165	protein_coding	Polr2f	utr3	ENSMUSG00000033020	ProperStrand	35	chrX	34622906	34623021	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	22	-inf
chr19	6241700	6241720	protein_coding	Atg2a	utr5	ENSMUSG00000024773	ProperStrand	97	chr16	23111721	23111776	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.1960
chr2	121949510	121949526	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	chr7	87504475	87504492	protein_coding	Man2a2	intron	ENSMUSG00000038886	ProperStrand	18	1	-12.7410
chr12	36883749	36883766	protein_coding	Ankmy2	utr5	ENSMUSG00000036188	ProperStrand	6	chr17	35299507	35299619	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	2	-15.2504
chr19	55998429	55998445	protein_coding	Tcf7l2	utr3	ENSMUSG00000024985	ProperStrand	103	chr18	35716763	35716788	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.3404
chr13	46796608	46796674	protein_coding	Nup153	intron	ENSMUSG00000021374	ProperStrand	69	chr13	17896093	17896183	protein_coding	Cdk13	exon	ENSMUSG00000041297	ProperStrand	29	1	-14.5100
chr6	115742094	115742110	protein_coding	Cand2	exon	ENSMUSG00000030319	NonProperStrand	21	chr18	73693166	73693187	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-7.6156
chr7	81088210	81088226	protein_coding	St8sia2	exon	ENSMUSG00000025789	NonProperStrand	6	chr5	37186635	37186688	protein_coding	Mrfap1	utr3	ENSMUSG00000055302	ProperStrand	62	2	-inf
chr2	129024539	129024615	protein_coding	Slc20a1	utr5	ENSMUSG00000027397	ProperStrand	81	chr7	118219575	118219655	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-3.6091
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr3	101395393	101395749	protein_coding	Atp1a1	exon	ENSMUSG00000033161	ProperStrand	316	1	-3.8121
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr1	162966189	162966258	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	2	-2.3834
chr2	90235303	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	25920545	25921169	protein_coding	Adam5	exon	ENSMUSG00000031554	ProperStrand	49	1	-4.8520
chr5	136384915	136385015	protein_coding	Ywhag	utr3	ENSMUSG00000051391	ProperStrand	142	chr11	62418018	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	2	-6.5697
chr6	13531530	13531561	protein_coding	Tmem168	utr3	ENSMUSG00000029569	ProperStrand	17	chr4	143027927	143028559	protein_coding	Oog4	exon	ENSMUSG00000047799	NonProperStrand	99	1	-14.8747
chr8	72900929	72900948	protein_coding	Comp	intron	ENSMUSG00000031849	ProperStrand	2	chr9	21599501	21599566	protein_coding	Kank2	exon	ENSMUSG00000032194	ProperStrand	196	1	-19.1301
chr9	30235084	30235102	protein_coding	Snx19	exon	ENSMUSG00000031993	ProperStrand	353	chr15	5068407	5068470	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-2.7327
chr16	35464455	35464485	protein_coding	Pdia5	exon	ENSMUSG00000022844	ProperStrand	26	chr16	23111694	23111784	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-8.4937
chr7	135113336	135115392	protein_coding	Fus	exon	ENSMUSG00000030795	ProperStrand	162	chr5	115940328	115940406	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	25	-19.4934
chr7	116663621	116663773	protein_coding-noncoding	Rpl27a	utr5	ENSMUSG00000046364	ProperStrand	57	chr16	23111408	23111508	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-4.0208
chr7	29101061	29101161	protein_coding	Supt5h	exon	ENSMUSG00000003435	ProperStrand	123	chr15	79913288	79913334	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	9	-inf
chr7	117166744	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	chr17	24665420	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	9	-0.8522
chr2	90235295	90235332	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	90780755	90827859	protein_coding	Celf1	utr5	ENSMUSG00000005506	ProperStrand	61	1	-4.4311
chr11	55302649	55310834	protein_coding	G3bp1	intron	ENSMUSG00000018583	ProperStrand	106	chr4	131908236	131908344	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-3.6466
chr2	90235294	90235325	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr3	130952742	130952838	protein_coding	Hadh	exon	ENSMUSG00000027984	ProperStrand	35	2	-9.0354
chr10	127790209	127795393	protein_coding	Cs	exon	ENSMUSG00000005683	ProperStrand	63	chr19	8800356	8800446	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-3.4402
chr16	96257541	96257588	protein_coding	Brwd1	exon	ENSMUSG00000022914	ProperStrand	77	chr7	116664868	116664919	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-3.8241
chr16	23110825	23110851	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr10	127551463	127551520	protein_coding	Baz2a	exon	ENSMUSG00000040054	ProperStrand	274	3	-13.7730
chr9	108400827	108400885	protein_coding	Usp19	exon	ENSMUSG00000006676	NonProperStrand	1	chr1	162967512	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	NonProperStrand	5	1	-inf
chr16	65089940	65089959	protein_coding	Htr1f	intron	ENSMUSG00000050783	NonProperStrand	10	chr11	69481433	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-6.6979
chr19	4803438	4803455	protein_coding	Rbm14	exon	ENSMUSG00000006456	NonProperStrand	16	chr16	23110828	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.9771
chr5	144944184	144944239	protein_coding	Lmtk2	exon	ENSMUSG00000038970	ProperStrand	60	chr9	15119722	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.6296
chr3	62408939	62408957	protein_coding	Gpr149	utr5	ENSMUSG00000043441	ProperStrand	1	chr7	29136525	29136654	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-inf
chr17	30772308	30991767	protein_coding	Dnahc8	exon	ENSMUSG00000033826	ProperStrand	246	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-3.2677
chr16	57391752	57391792	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr8	129468800	129468866	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	NonProperStrand	22	1	-12.3381
chr17	46324993	46325045	protein_coding	Polh	exon	ENSMUSG00000023953	ProperStrand	6	chr7	116664819	116664924	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-7.0474
chr4	117557894	117558245	protein_coding	Atp6v0b	exon	ENSMUSG00000033379	ProperStrand	13	chr16	11144204	11144304	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	1	-13.5773
chr11	69483190	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	chr17	26360446	26360536	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	2	-0.7728
chr15	12739183	12739273	protein_coding	6030458C11Rik	utr3	ENSMUSG00000022195	ProperStrand	12	chr8	113366330	113366354	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	2	-inf
chr6	146552484	146554680	protein_coding	Tm7sf3	exon	ENSMUSG00000040234	ProperStrand	43	chr5	74489574	74489654	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	22	-inf
chr14	87912387	87912403	protein_coding	Tdrd3	utr3	ENSMUSG00000022019	NonProperStrand	46	chr8	129469505	129469534	protein_coding	Tomm20	exon	ENSMUSG00000058779	ProperStrand	55	1	-14.0234
chr12	56592263	56592675	protein_coding	Nfkbia	exon	ENSMUSG00000021025	ProperStrand	11	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-11.6167
chr9	59526705	59526784	protein_coding	Pkm2	utr3	ENSMUSG00000032294	ProperStrand	1296	chr7	51511292	51511313	protein_coding	2410002F23Rik	intron	ENSMUSG00000045411	ProperStrand	628	1	-2.7136
chr14	117972310	117972326	protein_coding	Gpc6	intron	ENSMUSG00000058571	ProperStrand	28	chr7	116663712	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.8921
chr16	17154360	17160103	protein_coding	Ube2l3	exon	ENSMUSG00000038965	ProperStrand	29	chr11	69483136	69483195	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-6.3832
chr16	84810840	84810866	protein_coding	Jam2	utr3	ENSMUSG00000053062	ProperStrand	39	chr19	8798765	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-5.6406
chr5	100855943	100855974	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr9	94437678	94437729	protein_coding	1190002N15Rik	exon	ENSMUSG00000045414	ProperStrand	8	1	-10.7541
mmu-miR-6238	1	18	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr11	55296208	55296275	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-3.5255
chr1	72871132	72871191	protein_coding	Igfbp2	utr5	ENSMUSG00000039323	ProperStrand	406	chr17	35299564	35299641	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-1.4408
chr8	13558670	13558772	protein_coding	1700029H14Rik	exon	ENSMUSG00000031452	ProperStrand	19	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-13.0983
chr2	90235298	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	3637251	3639520	protein_coding	Stxbp2	exon	ENSMUSG00000004626	ProperStrand	19	2	-10.9135
chr7	134929742	134929842	protein_coding	Setd1a	exon	ENSMUSG00000042308	ProperStrand	58	chr18	75161534	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-7.2706
chr15	81460490	81462084	protein_coding	Ep300	exon	ENSMUSG00000055024	ProperStrand	118	chr11	62416598	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-3.8763
chr17	24370825	24370925	protein_coding	Ccnf	intron	ENSMUSG00000072082	ProperStrand	149	chr4	79648815	79648870	pseudogene	Gm11407	.	ENSMUSG00000082179	ProperStrand	26	1	-13.1813
chr11	75314027	75314084	protein_coding	Prpf8	utr3	ENSMUSG00000020850	ProperStrand	255	chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	2	-8.6179
chr9	100919194	100919211	protein_coding	Pccb	intron	ENSMUSG00000032527	NonProperStrand	2	chr4	131865931	131865989	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-8.7800
chr12	87365308	87365378	protein_coding	Ttll5	intron	ENSMUSG00000012609	ProperStrand	23	chr7	116663634	116663724	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.2677
chr17	62367076	62367098	LINE	Lx3_Mus	L1	chr17Lx3_Mus62365494	ProperStrand	4	chr18	33954878	33954923	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-14.8291
chr2	122429501	122435409	protein_coding	Gatm	exon	ENSMUSG00000027199	ProperStrand	6	chr4	131865855	131865977	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-10.2022
chr19	3810138	3810217	protein_coding	Suv420h1	intron	ENSMUSG00000045098	ProperStrand	7	chr7	52381723	52381751	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	2	-18.9673
chr18	41356147	41356185	miRNA	Mir5097	dead	ENSMUSG00000093361	ProperStrand	221	chr11	100950827	100950945	protein_coding	Mlx	intron	ENSMUSG00000017801	NonProperStrand	2	2	-inf
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	7	-9.5024
chr2	90235299	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	66385173	66385189	protein_coding	Scn9a	exon	ENSMUSG00000075316	ProperStrand	58	2	-7.5309
chr18	73749466	73749556	protein_coding	Mex3c	exon	ENSMUSG00000037253	ProperStrand	17	chr11	97642967	97643047	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.8122
chr17	45797194	45797294	protein_coding	Tmem63b	utr3	ENSMUSG00000036026	ProperStrand	93	chr18	35714251	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-2.6597
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr5	121656693	121656719	protein_coding	Rpl6	exon	ENSMUSG00000029614	ProperStrand	332	1	-4.6190
chr8	73419575	73419821	protein_coding	Rpl18a	exon	ENSMUSG00000045128	ProperStrand	394	chr1	162967513	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-1.3131
chr19	46576631	46576707	protein_coding	Trim8	utr5	ENSMUSG00000025034	ProperStrand	29	chr10	110918574	110918664	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-8.0120
chr3	14887897	14887997	protein_coding	Car2	exon	ENSMUSG00000027562	ProperStrand	14	chr7	118219575	118219620	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-7.0429
chr16	98171870	98171950	protein_coding	Zfp295	exon	ENSMUSG00000046962	ProperStrand	63	chr8	129468747	129468837	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	13	-inf
chr2	26767737	26767784	protein_coding-noncoding	Rpl7a	utr5	ENSMUSG00000062647	ProperStrand	53	chr15	98356776	98356808	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	4	-19.5818
chr10	28308861	28309150	protein_coding	Ptprk	exon	ENSMUSG00000019889	ProperStrand	45	chrX	34622940	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-3.6993
chr5	110637520	110637593	protein_coding	Golga3	exon	ENSMUSG00000029502	ProperStrand	17	chr4	131908374	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.5556
chr9	78023109	78023150	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr1	75177667	75177767	protein_coding	Atg9a	utr3	ENSMUSG00000033124	ProperStrand	17	6	-20.8975
chr18	35716607	35716736	lincRNA	Snhg4	intron	ENSMUSG00000090430	ProperStrand	270	chr18	35716711	35716889	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	17	-20.2659
chr15	65543010	65543090	LTR	RMER17C-int	ERVK	chr15RMER17C-int65542887	ProperStrand	1	chr15	65542783	65542873	LTR	RMER17C	ERVK	chr15RMER17C65542542	ProperStrand	1	1	-inf
chr7	29073210	29073330	protein_coding	BC089491	exon	ENSMUSG00000046750	ProperStrand	62	chr11	62418014	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-5.4931
chr18	36917090	36917129	protein_coding	Ik	utr3	ENSMUSG00000024474	ProperStrand	60	chr4	131865494	131865859	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-4.0022
chr18	12625208	12625230	protein_coding	Lama3	intron	ENSMUSG00000024421	ProperStrand	20	chr4	131865855	131865981	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.6810
chr11	74748899	74748915	protein_coding	Smg6	exon	ENSMUSG00000038290	NonProperStrand	20	chr11	116938567	116938688	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	6	-20.0824
chr16	21540126	21543385	protein_coding	Vps8	exon	ENSMUSG00000033653	ProperStrand	27	chr16	23111765	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.2801
chr7	106418108	106418148	protein_coding	Mtap6	intron	ENSMUSG00000055407	ProperStrand	10	chr2	125389949	125389966	protein_coding	Cep152	exon	ENSMUSG00000068394	ProperStrand	60	1	-16.9842
chr2	130101972	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	chr11	62418061	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	5	-0.9582
chr9	107850693	107850732	protein_coding	Camkv	utr3	ENSMUSG00000032936	ProperStrand	14	chr19	7054884	7054901	protein_coding	Fkbp2	utr5	ENSMUSG00000056629	ProperStrand	18	1	-18.7464
chr9	106564740	106564800	protein_coding	Tex264	exon	ENSMUSG00000040813	ProperStrand	18	chr19	8800085	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-10.0413
chr2	168574395	168580814	protein_coding	Sall4	utr3	ENSMUSG00000027547	ProperStrand	82	chr4	131908689	131908805	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-2.7958
chr13	55945990	55946007	LINE	L1MD2	L1	chr13L1MD255945962	ProperStrand	6	chr16	23111690	23111753	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-6.2752
chr17	47928467	47928484	protein_coding	Tfeb	exon	ENSMUSG00000023990	ProperStrand	78	chr5	118477951	118477967	protein_coding	Tesc	exon	ENSMUSG00000029359	ProperStrand	114	1	-11.4966
chr17	69737986	69738002	protein_coding	Zfp161	utr3	ENSMUSG00000049672	NonProperStrand	45	chr14	33005063	33005093	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-4.5406
chr10	127795518	127795564	protein_coding	Cs	exon	ENSMUSG00000005683	ProperStrand	63	chr16	23111386	23111450	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.1926
chr8	74136055	74136870	protein_coding	Glt25d1	exon	ENSMUSG00000034807	ProperStrand	36	chr5	31209135	31209793	protein_coding	Ost4	utr3	ENSMUSG00000038803	ProperStrand	8	1	-18.0214
chr15	73418139	73419900	protein_coding	Slc45a4	exon	ENSMUSG00000079020	ProperStrand	127	chr4	122970469	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	3	-13.6520
chr8	87223594	87223610	protein_coding	Trmt1	exon	ENSMUSG00000001909	NonProperStrand	60	chr15	96250958	96251014	protein_coding	Scaf11	exon	ENSMUSG00000033228	ProperStrand	37	4	-19.6183
chr5	104866698	104866733	protein_coding	Spp1	exon	ENSMUSG00000029304	ProperStrand	52	chrX	83547356	83547372	protein_coding	Mageb4	intron	ENSMUSG00000035427	NonProperStrand	191	1	-11.2787
chr3	32236599	32236689	protein_coding	Zmat3	utr3	ENSMUSG00000027663	ProperStrand	62	chr19	8800355	8800435	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-3.4696
chr14	61398407	61398423	protein_coding	C1qtnf9	exon	ENSMUSG00000071347	ProperStrand	187	chr17	39985458	39985532	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-3.7520
chr14	45949538	45949554	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	chr4	116827839	116827891	snoRNA	ENSMUSG00000064751_SNORD46	.	ENSMUSG00000064751	ProperStrand	132	1	-8.3437
chr6	37895565	37908606	protein_coding	Trim24	exon	ENSMUSG00000029833	ProperStrand	27	chr4	53873600	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	2	-16.8080
chr12	81210702	81210732	protein_coding	Zfp36l1	exon	ENSMUSG00000021127	ProperStrand	12	chr17	24665444	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-8.1632
chr17	37102241	37102341	protein_coding	Znrd1as	exon	ENSMUSG00000036214	ProperStrand	4	chr16	23110977	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.6489
chr13	62944660	62944677	protein_coding	Fbp2	intron	ENSMUSG00000021456	ProperStrand	100	chr10	128061658	128062277	protein_coding	Rps26	exon	ENSMUSG00000025362	ProperStrand	67	1	-12.0651
chr7	148625068	148625105	protein_coding	Lrdd	exon	ENSMUSG00000025507	ProperStrand	14	chr5	102092856	102092872	protein_coding	Nkx6-1	exon	ENSMUSG00000035187	NonProperStrand	10	1	-20.4644
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr12	110874223	110874290	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	1	-5.5458
chr9	95524992	95525034	snoRNA	ENSMUSG00000065346_SNORA4	.	ENSMUSG00000065346	ProperStrand	142	chr19	8963028	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-0.9990
chr11	102294587	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr1	59761635	59761715	snoRNA	ENSMUSG00000089093_Snord11	.	ENSMUSG00000089093	ProperStrand	193	1	-6.5699
chr1	169212390	169212427	protein_coding	Uck2	intron	ENSMUSG00000026558	ProperStrand	45	chr17	35088957	35089018	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	2	-10.4258
chrX	156568143	156570041	protein_coding	Pdha1	exon	ENSMUSG00000031299	ProperStrand	27	chr16	23110530	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	4	-12.9324
chr13	94211421	94211521	protein_coding	Jmy	exon	ENSMUSG00000021690	ProperStrand	16	chr19	8798502	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-7.8497
chr8	109127279	109193540	protein_coding	Cdh1	utr3	ENSMUSG00000000303	ProperStrand	283	chr16	23110830	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	26	-9.8648
chr14	79739412	79739448	protein_coding	Naa16	exon	ENSMUSG00000022020	ProperStrand	19	chr10	110918550	110918640	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-5.6609
chr8	86736367	86736383	protein_coding	Zswim4	exon	ENSMUSG00000035671	ProperStrand	27	chr1	120399488	120399561	protein_coding	Clasp1	exon	ENSMUSG00000064302	ProperStrand	23	1	-16.8197
chr9	37192069	37192086	protein_coding	Hepacam	intron	ENSMUSG00000046240	NonProperStrand	29	chr9	15119631	15119723	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.9539
chr6	125065100	125065182	protein_coding	Chd4	intron	ENSMUSG00000063870	ProperStrand	303	chr1	162965986	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-0.9950
chrX	148331178	148353175	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	chr5	130300444	130300548	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	6	-2.2627
chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr18	63908609	63908625	protein_coding	Wdr7	intron	ENSMUSG00000040560	NonProperStrand	180	1	-4.3218
chr6	113067496	113067578	protein_coding	Setd5	exon	ENSMUSG00000034269	ProperStrand	162	chr11	6428138	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.5402
chr1	183849598	183849688	protein_coding	Enah	exon	ENSMUSG00000022995	ProperStrand	196	chr9	15119646	15119726	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	31	-inf
chr5	65952377	65952395	protein_coding	Ube2k	intron	ENSMUSG00000029203	ProperStrand	289	chr11	6519819	6519944	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	3	-11.4478
chr5	76636906	76637586	protein_coding	Tmem165	exon	ENSMUSG00000029234	ProperStrand	22	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	14	-inf
chr15	76135114	76135324	protein_coding	Oplah	exon	ENSMUSG00000022562	ProperStrand	20	chr9	15118245	15118317	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-5.5777
chr7	5062341	5062360	protein_coding	Rfpl4	exon	ENSMUSG00000035191	NonProperStrand	27	chr8	89029358	89029374	protein_coding	Abcc12	exon	ENSMUSG00000036872	NonProperStrand	7	1	-inf
chr9	106136473	106137722	protein_coding	Alas1	exon	ENSMUSG00000032786	ProperStrand	3	chr5	135857995	135858011	protein_coding	Pom121	exon	ENSMUSG00000053293	NonProperStrand	94	1	-18.3984
chr11	68067261	68067277	protein_coding	Ntn1	intron	ENSMUSG00000020902	NonProperStrand	194	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-2.9653
chr1	162966189	162966212	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	chr11	51551280	51551335	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	1	-2.2722
chr5	87942639	87942656	protein_coding	Sult1b1	utr3	ENSMUSG00000029269	NonProperStrand	2	chr9	121127859	121127913	protein_coding	Ulk4	intron	ENSMUSG00000040936	ProperStrand	15	2	-inf
chr15	9519210	9519229	protein_coding	Spef2	exon	ENSMUSG00000072663	ProperStrand	16	chr18	35716763	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-7.6909
chr16	67950634	67950714	LINE	Lx	L1	chr16Lx67950570	NonProperStrand	1	chr16	67950447	67950537	LTR	ORR1B1-int	MaLR	chr16ORR1B1-int67950346	NonProperStrand	1	1	-inf
chr18	73693108	73693145	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr10	107800720	107800854	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	7	-9.8010
chr14	56159296	56159314	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	chr6	124665421	124665521	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	1	-4.6224
chr11	94495866	94495956	protein_coding	Lrrc59	exon	ENSMUSG00000020869	ProperStrand	115	chr18	74938061	74938141	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	ProperStrand	1022	63	-19.9821
chr4	45000187	45000204	protein_coding	Grhpr	exon	ENSMUSG00000035637	ProperStrand	35	chr19	8963027	8963127	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.2191
chr7	117189865	117189922	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr3	88497853	88497943	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-1.0614
chr7	20188618	20189824	protein_coding	Clasrp	utr5	ENSMUSG00000061028	ProperStrand	11	chr16	23110454	23110523	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	4	-18.0034
chr12	87855363	87860603	protein_coding	Esrrb	utr3	ENSMUSG00000021255	ProperStrand	254	chr18	35716806	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-1.4650
chr7	119260992	119261082	protein_coding	Dkk3	utr3	ENSMUSG00000030772	ProperStrand	7	chr9	64143736	64143816	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-12.1896
chr7	146038885	146038930	protein_coding	Ppp2r2d	intron	ENSMUSG00000041769	ProperStrand	62	chr16	23110965	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-2.1998
chr8	87525135	87525238	protein_coding	Hook2	exon	ENSMUSG00000052566	ProperStrand	204	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-0.7664
chr16	36071984	36072000	protein_coding	Ccdc58	utr5	ENSMUSG00000075229	NonProperStrand	55	chr15	79908931	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-5.6429
chr8	23898342	23898444	protein_coding	Ap3m2	utr3	ENSMUSG00000031539	ProperStrand	15	chr11	77995189	77995239	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	14	-inf
chr11	62416574	62416619	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr11	62416578	62416657	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	28	-21.5242
chr2	25794115	25794163	protein_coding	Camsap1	exon	ENSMUSG00000026933	ProperStrand	27	chr4	85016349	85016365	protein_coding	Sh3gl2	intron	ENSMUSG00000028488	NonProperStrand	313	1	-11.6178
chr13	100200303	100200354	protein_coding	Mtap1b	exon	ENSMUSG00000052727	ProperStrand	76	chr4	131908689	131908751	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-5.9741
chr11	120049842	120049932	lincRNA	2810410L24Rik	exon	ENSMUSG00000075389	ProperStrand	3	chr7	29136543	29136623	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-8.4253
chr16	91625713	91625743	protein_coding	Gart	exon	ENSMUSG00000022962	ProperStrand	200	chr3	76068664	76068680	protein_coding	Fstl5	intron	ENSMUSG00000034098	ProperStrand	23	1	-12.8400
chr19	38869531	38869547	protein_coding	Noc3l	exon	ENSMUSG00000024999	NonProperStrand	149	chr4	116828389	116828452	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-6.5744
chr16	18241866	18241903	protein_coding	Ranbp1	exon	ENSMUSG00000005732	ProperStrand	22	chr14	22155532	22155550	protein_coding	Adk	intron	ENSMUSG00000039197	ProperStrand	32	1	-16.6069
chr9	106621375	106621394	protein_coding	Rad54l2	exon	ENSMUSG00000040661	ProperStrand	51	chr7	134671398	134671488	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	5	-21.2381
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr1	190267301	190267317	protein_coding	Ush2a	exon	ENSMUSG00000026609	NonProperStrand	60	1	-7.7952
chr11	100377229	100377296	protein_coding	Acly	exon	ENSMUSG00000020917	ProperStrand	183	chr12	106269346	106269436	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-2.1518
chr5	77738902	77738918	protein_coding	Noa1	exon	ENSMUSG00000036285	ProperStrand	147	chr1	162965531	162965569	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.7567
chr10	27783462	27783552	SINE	B1_Mur4	Alu	chr10B1_Mur427783433	ProperStrand	1	chr10	27783666	27783746	SINE	B1_Mus2	Alu	chr10B1_Mus227783669	ProperStrand	1	1	-inf
chr2	90235289	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	27062446	27062463	protein_coding	Hgsnat	exon	ENSMUSG00000037260	ProperStrand	41	1	-5.1984
chr7	91259168	91259248	protein_coding	Fam108c	exon	ENSMUSG00000038459	ProperStrand	19	chr3	123210891	123210981	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-4.1309
chr2	26768049	26768109	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	chr5	108334245	108334274	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	2	-1.5733
chr8	124175982	124176019	protein_coding	Zcchc14	utr5	ENSMUSG00000061410	ProperStrand	22	chr11	69481333	69481380	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.1045
chr1	134800236	134800326	protein_coding	Lrrn2	intron	ENSMUSG00000026443	ProperStrand	4	chr7	29136561	29136641	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-7.7378
chr1	167929464	167929486	protein_coding	Pou2f1	intron	ENSMUSG00000026565	ProperStrand	34	chr4	131865855	131865937	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-7.1127
chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	chr1	89681204	89681396	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	9	-2.7237
chr8	125628957	125628992	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	chr8	77636527	77638073	protein_coding	Mcm5	exon	ENSMUSG00000005410	ProperStrand	199	1	-8.2114
chr9	78023189	78023242	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr9	36595618	36595634	protein_coding	Ei24	intron	ENSMUSG00000062762	ProperStrand	25	1	-7.6228
chr7	28091883	28092808	protein_coding	Ltbp4	exon	ENSMUSG00000040488	ProperStrand	91	chr1	155287317	155287355	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	1	-8.1460
chr14	63379512	63379528	lincRNA	4931440J10Rik	intron	ENSMUSG00000085212	ProperStrand	5	chr17	24837876	24837892	protein_coding	Tbl3	exon	ENSMUSG00000040688	ProperStrand	42	1	-18.2513
chr11	62122558	62122638	protein_coding	Ttc19	exon	ENSMUSG00000042298	ProperStrand	21	chr19	8963027	8963117	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.1775
chr5	108080416	108080437	protein_coding	Rpap2	intron	ENSMUSG00000033773	NonProperStrand	1	chr11	6520317	6520417	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	1	-inf
chr17	88389683	88389855	protein_coding	Msh6	exon	ENSMUSG00000005370	ProperStrand	150	chr11	102342951	102343031	protein_coding	Gpatch8	exon	ENSMUSG00000034621	ProperStrand	49	6	-inf
chr9	58723087	58723113	protein_coding	Neo1	utr3	ENSMUSG00000032340	ProperStrand	35	chr8	73419683	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.1302
chr17	32224050	32224067	pseudogene	Pdxk-ps	.	ENSMUSG00000002791	ProperStrand	6	chr10	107800795	107800854	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	1	-12.8250
chr11	121792346	121792426	LTR	RMER17B	ERVK	chr11RMER17B121791726	NonProperStrand	1	chr5	115841283	115841373	antisense	Gm13832	.	ENSMUSG00000087292	ProperStrand	47	1	-inf
chr1	24296538	24296554	protein_coding	Col19a1	exon	ENSMUSG00000026141	ProperStrand	37	chr11	68886972	68887027	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-5.0731
chr19	44882568	44882658	protein_coding	Pax2	intron	ENSMUSG00000004231	NonProperStrand	4	chr19	28474390	28474470	protein_coding	Glis3	intron	ENSMUSG00000052942	NonProperStrand	14	1	-inf
chr6	47738069	47738110	misc_RNA	Y_RNA	.	ENSMUSG00000065701	ProperStrand	129	chr7	29110999	29111016	protein_coding	Supt5h	exon	ENSMUSG00000003435	NonProperStrand	4	1	-17.4555
chr2	26942814	26942832	protein_coding	Adamtsl2	intron	ENSMUSG00000036040	ProperStrand	3	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-15.3235
chr13	9833562	9833661	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr11	48616672	48616706	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	1	-1.4746
chr3	94680927	94681179	protein_coding	Pogz	exon	ENSMUSG00000038902	ProperStrand	65	chr1	162967514	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-3.3279
chr6	70098720	70098737	LTR	MTEa	MaLR	chr6MTEa70098663	ProperStrand	30	chr10	23505193	23505282	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.3011
chr11	74986148	74986166	lincRNA	1700016P03Rik	intron	ENSMUSG00000085609	ProperStrand	1	chr13	40823795	40823812	protein_coding	Tfap2a	exon	ENSMUSG00000021359	ProperStrand	49	1	-inf
chr11	6520320	6520420	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	chr10	23505559	23505599	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-2.2655
chr9	63465328	63466968	protein_coding	Aagab	exon	ENSMUSG00000037257	ProperStrand	8	chr3	123210903	123210983	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.8655
chr4	55431651	55431668	lincRNA	Gm12505	exon	ENSMUSG00000087070	ProperStrand	447	chr10	90581034	90581134	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	2	-2.5183
chr15	4051176	4051192	protein_coding	Oxct1	exon	ENSMUSG00000022186	NonProperStrand	4	chr16	21938126	21938161	protein_coding	Tmem41a	exon	ENSMUSG00000022856	ProperStrand	2	1	-inf
chr11	34850251	34850269	LTR	MTD	MaLR	chr11MTD34849964	ProperStrand	1	chr14	57312831	57312859	protein_coding	Mphosph8	intron	ENSMUSG00000079184	NonProperStrand	27	1	-inf
chrX	34337277	34337773	protein_coding	Slc25a5	exon	ENSMUSG00000016319	ProperStrand	55	chr12	88778665	88778745	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-6.6701
chr4	132618673	132618700	protein_coding	Ahdc1	exon	ENSMUSG00000037692	ProperStrand	100	chr12	106269445	106269556	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	5	-13.8501
chr14	12427184	12427250	protein_coding	Ptprg	intron	ENSMUSG00000021745	ProperStrand	72	chr15	79913288	79913344	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	5	-14.0959
chr10	8080795	8080882	protein_coding	Ust	intron	ENSMUSG00000047712	NonProperStrand	15	chr16	23111394	23111449	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	11	-inf
chr10	25983768	25983784	protein_coding	Samd3	exon	ENSMUSG00000051354	NonProperStrand	11	chr2	145077954	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-11.1783
chr6	93155982	93156000	lincRNA	9530026P05Rik	intron	ENSMUSG00000087573	ProperStrand	51	chr7	116663691	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.7941
chrX	163645868	163645968	protein_coding	Tmsb4x	exon	ENSMUSG00000049775	ProperStrand	11	chr9	120038474	120038528	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-6.3233
chr13	96282309	96282391	protein_coding	F2rl1	utr3	ENSMUSG00000021678	ProperStrand	28	chr5	130300460	130300550	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.8897
chr3	63767426	63767474	protein_coding	Slc33a1	exon	ENSMUSG00000027822	ProperStrand	10	chr9	14624237	14624277	protein_coding	Mre11a	intron	ENSMUSG00000031928	ProperStrand	20	2	-19.6934
chr13	19684241	19684257	protein_coding	Epdr1	utr3	ENSMUSG00000002808	ProperStrand	46	chr19	38270857	38270875	protein_coding	5730455O13Rik	intron	ENSMUSG00000054237	NonProperStrand	3	1	-21.2914
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr17	85482653	85489599	protein_coding	Prepl	utr5	ENSMUSG00000024127	ProperStrand	106	1	-6.6645
chr16	37384897	37384913	protein_coding	Stxbp5l	utr5	ENSMUSG00000022829	ProperStrand	332	chr4	41137902	41137923	protein_coding	Ube2r2	utr3	ENSMUSG00000036241	ProperStrand	19	1	-12.2175
chr8	26937715	26937733	protein_coding	Ash2l	exon	ENSMUSG00000031575	ProperStrand	113	chr2	26494722	26494753	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.0230
chr4	116826904	116826980	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	chr17	35299509	35299609	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-2.1138
chr12	110888407	110888932	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr11	69481333	69481434	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	3	-0.8947
chr5	74489206	74489296	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr15	74536146	74536185	protein_coding	Jrk	utr3	ENSMUSG00000046380	ProperStrand	7	1	-10.0043
chr7	63084764	63084798	protein_coding	Tubgcp5	utr3	ENSMUSG00000033790	ProperStrand	5	chr10	23505152	23505209	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-5.7809
chr18	73693122	73693187	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr11	62416953	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	4	-1.2444
chr8	124320642	124325076	protein_coding	Klhdc4	exon	ENSMUSG00000040263	ProperStrand	13	chr2	166890518	166890580	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	2	-16.9166
chrX	71517859	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	chr2	32530695	32530769	snoRNA	ENSMUSG00000093277_AL772271.2	.	ENSMUSG00000093277	ProperStrand	23	1	-8.4683
chr3	96361950	96365620	protein_coding	Txnip	utr3	ENSMUSG00000038393	ProperStrand	172	chr15	79913282	79913346	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	8	-16.3686
chr9	110283882	110283928	protein_coding	Scap	exon	ENSMUSG00000032485	ProperStrand	37	chr7	28458681	28458698	protein_coding	Map3k10	exon	ENSMUSG00000040390	ProperStrand	14	1	-17.2921
chr11	97546534	97546564	protein_coding	Mllt6	utr3	ENSMUSG00000038437	ProperStrand	110	chr2	26494711	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.0664
chr11	101306576	101306597	protein_coding	Rpl27	exon	ENSMUSG00000063316	ProperStrand	96	chr4	131866629	131866673	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	1	-8.1647
chr2	153226014	153226030	protein_coding	Asxl1	exon	ENSMUSG00000042548	NonProperStrand	13	chr7	29136525	29136585	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.2243
chr5	64792049	64792069	LTR	MLT1H	MaLR	chr5MLT1H64791748	NonProperStrand	30	chr4	131908809	131908871	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.2894
chr13	39052372	39052388	protein_coding	Slc35b3	utr5	ENSMUSG00000021432	ProperStrand	27	chr3	123210919	123210972	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.4658
chr1	194571765	194571855	snRNA	ENSMUSG00000064881_U5	.	ENSMUSG00000064881	ProperStrand	187	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-3.0776
chr19	6051188	6051205	protein_coding	Syvn1	exon	ENSMUSG00000024807	NonProperStrand	2	chr15	102170407	102170437	protein_coding	Aaas	exon	ENSMUSG00000036678	ProperStrand	10	1	-inf
chr18	61736597	61736669	protein_coding	Csnk1a1	intron	ENSMUSG00000024576	ProperStrand	64	chr8	12757418	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-8.4638
chr12	53000152	53000169	protein_coding	Heatr5a	exon	ENSMUSG00000035181	NonProperStrand	22	chr13	46862945	46863020	snoRNA	ENSMUSG00000064558_SNORA55	.	ENSMUSG00000064558	ProperStrand	187	1	-13.0679
chr11	102170993	102171041	protein_coding	Ubtf	exon	ENSMUSG00000020923	ProperStrand	66	chr7	116664819	116664909	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.3863
chr14	47948933	47948949	LTR	RMER17A2	ERVK	chr14RMER17A247948307	NonProperStrand	43	chr3	88603786	88603866	pseudogene	5830417I10Rik	.	ENSMUSG00000078684	ProperStrand	68	1	-13.7366
chr13	73953472	73953537	protein_coding	Slc12a7	utr3	ENSMUSG00000017756	ProperStrand	80	chr9	15119649	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	6	-12.9911
chr5	100855902	100855937	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr7	149563330	149566740	protein_coding	Ctsd	exon	ENSMUSG00000007891	ProperStrand	60	6	-inf
chr16	45620182	45620198	protein_coding	Gcet2	exon	ENSMUSG00000022659	NonProperStrand	39	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-9.7935
chr13	64263279	64263295	protein_coding	Habp4	utr5	ENSMUSG00000021476	NonProperStrand	1	chr5	130295414	130295469	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	NonProperStrand	4	1	-inf
chr11	97546405	97546421	protein_coding	Mllt6	utr3	ENSMUSG00000038437	ProperStrand	110	chr14	57312831	57312888	protein_coding	Mphosph8	intron	ENSMUSG00000079184	NonProperStrand	27	1	-13.7125
chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-3.5186
chr6	28838469	28838528	protein_coding	Snd1	utr3	ENSMUSG00000001424	ProperStrand	210	chr17	24342579	24342598	protein_coding	Ntn3	utr3	ENSMUSG00000079662	ProperStrand	237	1	-8.0534
chr10	58901362	58901379	protein_coding	Oit3	exon	ENSMUSG00000009654	NonProperStrand	11	chr10	32906494	32915758	protein_coding	Trdn	exon	ENSMUSG00000019787	ProperStrand	9	1	-19.9764
chr2	162887299	162888199	protein_coding	Mybl2	exon	ENSMUSG00000017861	ProperStrand	230	chr9	15118322	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-2.4057
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr16	89809765	89809782	protein_coding	Tiam1	intron	ENSMUSG00000002489	NonProperStrand	26	1	-6.0972
chr10	80119278	80119296	protein_coding	Btbd2	utr5	ENSMUSG00000003344	NonProperStrand	3	chr12	17552949	17552995	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-11.3963
chr3	134906638	134906728	protein_coding	Cenpe	exon	ENSMUSG00000045328	ProperStrand	71	chr14	33005089	33005139	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-3.6791
chr18	74938045	74938122	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	ProperStrand	1022	chr16	43886791	43886845	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	1	-2.6546
chr1	129702508	129702581	protein_coding	Ccnt2	utr3	ENSMUSG00000026349	ProperStrand	34	chr16	23110530	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.4743
chr15	35857006	35857096	protein_coding	Cox6c	intron	ENSMUSG00000014313	ProperStrand	10	chr19	26757886	26757966	protein_coding	Smarca2	intron	ENSMUSG00000024921	ProperStrand	38	1	-17.9793
chr4	132066050	132066150	protein_coding	Sesn2	utr5	ENSMUSG00000028893	ProperStrand	75	chr11	68887040	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-3.7255
chr3	41362507	41362547	protein_coding	Phf17	intron	ENSMUSG00000025764	ProperStrand	101	chr3	95980362	95980410	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-5.8304
chr18	44577919	44577951	protein_coding	Dcp2	utr3	ENSMUSG00000024472	ProperStrand	44	chr8	124817584	124817603	protein_coding	Zfpm1	intron	ENSMUSG00000049577	ProperStrand	24	1	-15.8241
chr17	57040591	57040681	protein_coding	Mllt1	intron	ENSMUSG00000024212	ProperStrand	19	chr7	116663709	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.6387
chr8	108160587	108167472	protein_coding	Ctcf	utr5	ENSMUSG00000005698	ProperStrand	75	chr18	35716752	35716832	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.8113
chr13	76341035	76341055	protein_coding	Fam81b	intron	ENSMUSG00000078966	NonProperStrand	220	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.1760
chr2	34627584	34627601	protein_coding-noncoding	Hspa5	utr5	ENSMUSG00000026864	ProperStrand	1	chr9	120038467	120038519	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-inf
chr8	13416896	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr4	137149715	137149732	protein_coding	Usp48	utr5	ENSMUSG00000043411	NonProperStrand	10	1	-10.0944
chr9	61762182	61762235	protein_coding	Rplp1	exon	ENSMUSG00000007892	ProperStrand	116	chr17	80461102	80461120	protein_coding	Hnrpll	exon	ENSMUSG00000024095	ProperStrand	27	1	-13.6063
chr7	34981434	34981623	protein_coding	Pdcd2l	exon	ENSMUSG00000002635	ProperStrand	4	chr9	70960076	70960093	protein_coding	Aqp9	exon	ENSMUSG00000032204	NonProperStrand	118	1	-17.6418
chr11	121170958	121171047	protein_coding	Foxk2	utr3	ENSMUSG00000039275	ProperStrand	38	chr9	15119381	15119407	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	3	-13.8717
chr7	26559612	26559628	protein_coding	Axl	exon	ENSMUSG00000002602	NonProperStrand	47	chr7	52382014	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-7.1978
chr11	99716475	99716565	LINE	Lx8	L1	chr11Lx899716436	NonProperStrand	1	chr11	99716306	99716396	LTR	ORR1A3-int	MaLR	chr11ORR1A3-int99716299	ProperStrand	1	1	-inf
chr6	120275313	120275400	protein_coding	Ccdc77	utr3	ENSMUSG00000030177	ProperStrand	17	chr9	15119302	15119392	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-7.6201
chr9	119150130	119150177	protein_coding	Oxsr1	utr3	ENSMUSG00000036737	ProperStrand	33	chr11	77996560	77996620	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-7.2809
chr19	8800356	8800392	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	chr8	113362430	113362512	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	4	-2.9407
chr2	32781398	32781415	protein_coding	Lrsam1	utr3	ENSMUSG00000026792	ProperStrand	80	chr9	62640037	62640122	protein_coding	Fem1b	utr3	ENSMUSG00000032244	ProperStrand	111	1	-11.4996
chr19	37041015	37041032	protein_coding	Btaf1	exon	ENSMUSG00000040565	NonProperStrand	9	chr7	116664797	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	4	-18.8391
chr14	35233358	35233377	protein_coding	Bmpr1a	intron	ENSMUSG00000021796	ProperStrand	21	chr15	79908939	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-7.5631
chr15	36528978	36529041	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr2	130101986	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-0.7922
chr18	61169132	61169148	protein_coding	Slc6a7	exon	ENSMUSG00000052026	NonProperStrand	11	chr4	131908745	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.1344
chr9	40611862	40611993	protein_coding	Hspa8	exon	ENSMUSG00000015656	NonProperStrand	3	chr4	106583810	106583829	protein_coding	Ssbp3	intron	ENSMUSG00000061887	NonProperStrand	3	1	-inf
chrX	147476948	147476965	SINE	RSINE1	B4	chrXRSINE1147476844	NonProperStrand	20	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-13.9128
chr3	153575109	153575169	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	chr2	130102048	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	4	-5.1334
chr9	15119968	15120040	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	chr2	158182157	158182292	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	4	-2.1852
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr15	82980189	82980225	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	2	-2.6438
chr15	31561693	31561783	Low_complexity	CT-rich	Low_complexity	chr15CT-rich31561669	NonProperStrand	1	chr15	31561845	31561925	SINE	B1_Mur1	Alu	chr15B1_Mur131561806	ProperStrand	1	1	-inf
chr5	25355836	25355926	protein_coding	Actr3b	utr3	ENSMUSG00000056367	ProperStrand	32	chr11	69481332	69481412	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-4.3754
chr1	169213894	169213910	protein_coding	Uck2	intron	ENSMUSG00000026558	NonProperStrand	9	chr9	113564030	113564054	protein_coding	Pdcd6ip	utr3	ENSMUSG00000032504	ProperStrand	53	1	-17.2988
chr1	133252374	133252400	protein_coding	Srgap2	intron	ENSMUSG00000026425	ProperStrand	299	chr11	116938699	116938750	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	2	-5.3391
chr9	37461927	37462007	protein_coding	Tbrg1	exon	ENSMUSG00000011114	ProperStrand	56	chr10	23505190	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.3287
chr1	158360442	158376744	protein_coding	Soat1	exon	ENSMUSG00000026600	ProperStrand	21	chr16	23110915	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-6.5949
chr10	127484725	127484815	protein_coding	Naca	exon	ENSMUSG00000061315	ProperStrand	50	chr17	24857723	24857803	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.6076
chr4	83100859	83100910	protein_coding	Snapc3	intron	ENSMUSG00000028483	NonProperStrand	9	chr7	116664811	116664901	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-14.6571
chr7	19625459	19625549	protein_coding	Sympk	exon	ENSMUSG00000023118	ProperStrand	43	chr4	131908812	131908892	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-3.1637
chr13	96374713	96374729	protein_coding	F2r	exon	ENSMUSG00000048376	NonProperStrand	88	chr2	63936035	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	2	-11.4077
chr6	51416143	51416209	protein_coding	Hnrnpa2b1	exon	ENSMUSG00000004980	ProperStrand	166	chrX	71518357	71518412	protein_coding	Rpl10	utr3	ENSMUSG00000008682	ProperStrand	71	2	-17.2939
chr3	86593384	86595968	protein_coding	Dclk2	exon	ENSMUSG00000028078	ProperStrand	50	chr2	130101996	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	2	-9.3320
chr8	91106344	91106360	protein_coding	Nkd1	intron	ENSMUSG00000031661	ProperStrand	57	chr4	131865392	131865427	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-4.0989
chr11	63264079	63264095	LTR	ORR1D1	MaLR	chr11ORR1D163264002	NonProperStrand	11	chr7	29136525	29136575	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.5623
chr10	79606892	79606908	protein_coding	Atp5d	intron	ENSMUSG00000003072	ProperStrand	44	chr6	33923327	33923376	protein_coding	Exoc4	utr3	ENSMUSG00000029763	ProperStrand	120	1	-12.5483
chr16	11144177	11144277	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr6	125080396	125080413	protein_coding	Chd4	utr3	ENSMUSG00000063870	ProperStrand	303	1	-7.2284
chr5	115692431	115692505	protein_coding	Rnf10	exon	ENSMUSG00000041740	ProperStrand	95	chr9	45198928	45199653	protein_coding	Fxyd6	exon	ENSMUSG00000066705	NonProperStrand	108	1	-11.2091
chr2	145076805	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	chr7	148634713	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	4	-1.3593
chr9	59518485	59526622	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr2	145077957	145209256	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	3	-5.3982
chr1	94841630	94841676	protein_coding	Capn10	exon	ENSMUSG00000026270	ProperStrand	32	chr1	162966190	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-8.8381
chr11	96679126	96679172	protein_coding	Nfe2l1	utr3	ENSMUSG00000038615	ProperStrand	118	chr1	162967531	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-2.2842
chr6	89506986	89507076	protein_coding	Chchd6	intron	ENSMUSG00000030086	ProperStrand	20	chr10	23505185	23505265	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.0137
chr11	97022217	97022307	protein_coding	Kpnb1	utr3	ENSMUSG00000001440	ProperStrand	197	chr4	137121274	137121354	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	1	-5.7528
chr5	100855912	100855974	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr17	6138911	6138928	protein_coding	Tulp4	exon	ENSMUSG00000034377	ProperStrand	164	2	-7.7409
chr3	151900671	151900713	protein_coding	Nexn	exon	ENSMUSG00000039103	NonProperStrand	5	chr4	131908809	131908902	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-14.4653
chrX	131255044	131255102	protein_coding	Armcx1	exon	ENSMUSG00000033460	ProperStrand	6	chr16	23111386	23111503	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	5	-19.0950
chr2	26294632	26294722	protein_coding	Sec16a	exon	ENSMUSG00000026924	ProperStrand	86	chr9	120037910	120037990	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-4.0212
chr10	117176276	117176361	protein_coding	Slc35e3	intron	ENSMUSG00000060181	ProperStrand	11	chr1	162968468	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-9.5125
chr6	71832620	71832667	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	chr13	96100596	96100694	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	1	-1.0617
chr19	53079306	53080707	protein_coding	Xpnpep1	exon	ENSMUSG00000025027	ProperStrand	49	chr11	99885311	99885327	protein_coding	Krt33b	exon	ENSMUSG00000057723	NonProperStrand	352	1	-10.1763
chr11	72999864	72999944	protein_coding	Ctns	exon	ENSMUSG00000005949	ProperStrand	28	chr7	116664794	116664884	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-6.6521
chr2	57209020	57210114	protein_coding	Gpd2	exon	ENSMUSG00000026827	ProperStrand	93	chr7	116663656	116663736	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	10	-21.4172
chr12	87862297	87862387	protein_coding	Esrrb	utr3	ENSMUSG00000021255	ProperStrand	254	chr7	116664794	116664874	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	5	-4.2294
chr14	25312645	25315000	protein_coding	Rps24	exon	ENSMUSG00000025290	ProperStrand	110	chr9	120039565	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-4.0230
chr17	88382882	88390205	protein_coding	Msh6	exon	ENSMUSG00000005370	ProperStrand	150	chr16	23110892	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	12	-4.6853
chr17	16100601	16100617	LINE	Lx2	L1	chr17Lx216099737	ProperStrand	5	chr3	123210915	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-6.8746
chr15	12067713	12067795	protein_coding	Zfr	exon	ENSMUSG00000022201	ProperStrand	48	chr11	97313250	97313310	protein_coding	Arhgap23	exon	ENSMUSG00000049807	ProperStrand	80	2	-19.0848
chr11	118900007	118900025	protein_coding	Cbx8	exon	ENSMUSG00000025578	ProperStrand	95	chr19	8963045	8963182	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.5487
chr6	119940131	119940162	protein_coding	Wnk1	exon	ENSMUSG00000045962	ProperStrand	221	chr7	53653469	53653487	protein_coding	Kcnc1	exon	ENSMUSG00000058975	ProperStrand	21	1	-12.8266
chr17	28466321	28466367	protein_coding	Rpl10a	exon	ENSMUSG00000037805	ProperStrand	121	chr4	131865391	131865481	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-2.7269
chr15	60661082	60661099	lincRNA	9930014A18Rik	exon	ENSMUSG00000044513	ProperStrand	54	chr7	116663633	116663723	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-4.7171
chr15	81460471	81460533	protein_coding	Ep300	exon	ENSMUSG00000055024	ProperStrand	118	chr9	15119647	15119697	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-2.8695
chr14	76154136	76154161	protein_coding	Cog3	exon	ENSMUSG00000034893	ProperStrand	37	chr15	34370545	34370603	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	3	-10.7379
chr4	131908443	131908467	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr1	89673531	89673622	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	11	-3.5171
chr11	3817668	3819334	protein_coding	Tcn2	exon	ENSMUSG00000020432	ProperStrand	7	chr4	46091328	46096417	protein_coding	Tmod1	exon	ENSMUSG00000028328	ProperStrand	6	1	-19.4524
chr16	11144168	11144258	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr3	89771964	89772053	snRNA	ENSMUSG00000065045_U1	.	ENSMUSG00000065045	NonProperStrand	6	2	-19.1083
chr1	94919509	94919609	protein_coding	Kif1a	exon	ENSMUSG00000014602	ProperStrand	18	chr7	118219575	118219650	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-6.5317
chr11	100924438	100924455	protein_coding	Atp6v0a1	utr3	ENSMUSG00000019302	NonProperStrand	5	chr9	15118284	15118317	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-8.4764
chr16	35932620	35932636	protein_coding	Dtx3l	exon	ENSMUSG00000049502	ProperStrand	152	chr11	6428077	6428169	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-4.6808
chr12	110271945	110271962	protein_coding	Begain	exon	ENSMUSG00000040867	NonProperStrand	9	chr11	6428111	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-6.9084
chr7	54169831	54169870	protein_coding	Tsg101	intron	ENSMUSG00000014402	ProperStrand	3	chr16	23111389	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-6.9982
chr11	68067261	68067277	protein_coding	Ntn1	intron	ENSMUSG00000020902	NonProperStrand	194	chr14	15572351	15572370	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	1	-8.9324
chr7	104823132	104824774	protein_coding	Rsf1	exon	ENSMUSG00000035623	ProperStrand	48	chr6	53892600	53892618	protein_coding	Cpvl	intron	ENSMUSG00000052955	NonProperStrand	4	1	-19.0980
chr8	106976637	106976653	protein_coding	Ccdc79	exon	ENSMUSG00000052616	NonProperStrand	57	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-5.3114
chr16	37777389	37777408	protein_coding	Fstl1	exon	ENSMUSG00000022816	ProperStrand	179	chr7	51505857	51505909	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	1	-6.4432
chr9	65049539	65049600	snRNA	ENSMUSG00000075930_U5	.	ENSMUSG00000075930	NonProperStrand	3	chr7	29136541	29136641	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	NonProperStrand	27	1	-21.2276
chr16	17841651	17841706	protein_coding	Dgcr2	utr3	ENSMUSG00000003166	ProperStrand	45	chr9	120038635	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.5633
chr11	79055621	79055679	protein_coding-noncoding	Wsb1	utr3	ENSMUSG00000017677	ProperStrand	5	chr11	62416578	62416632	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	3	-19.6897
chr11	77996557	77996619	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	chr9	64022855	64022878	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-1.3638
chr6	47474569	47475565	protein_coding	Cul1	exon	ENSMUSG00000029686	ProperStrand	8	chr4	131908236	131908338	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-12.4254
chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	chr11	62416578	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	3	-2.7124
chrX	164560845	164560862	protein_coding	Frmpd4	utr5	ENSMUSG00000049176	ProperStrand	12	chr15	57978169	57978238	snoRNA	ENSMUSG00000080461_SNORA11	.	ENSMUSG00000080461	ProperStrand	171	1	-14.4918
chr6	48035922	48035941	protein_coding	Zfp746	intron	ENSMUSG00000057691	ProperStrand	23	chr2	130102053	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-7.2605
chr11	88156472	88156488	protein_coding	Msi2	utr3	ENSMUSG00000069769	NonProperStrand	12	chr16	23111760	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.8390
chr7	52717326	52718808	protein_coding	Bax	exon	ENSMUSG00000003873	ProperStrand	24	chr16	23111375	23111465	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-9.8344
chr17	15963241	15963331	protein_coding	Rgmb	utr5	ENSMUSG00000048027	ProperStrand	5	chr4	122970443	122970523	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-12.5682
chr1	162980360	162980379	protein_coding	Dars2	intron	ENSMUSG00000026709	NonProperStrand	4	chr10	23505151	23505279	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-10.6986
chrX	12736000	12736042	protein_coding	Usp9x	exon	ENSMUSG00000031010	ProperStrand	174	chr7	117190023	117190060	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-1.5492
chr11	19964171	19964261	protein_coding	Actr2	utr3	ENSMUSG00000020152	ProperStrand	72	chr4	131908267	131908347	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-2.2645
chr17	45704952	45705052	protein_coding	Hsp90ab1	utr3	ENSMUSG00000023944	ProperStrand	1627	chr10	127522387	127522416	snoRNA	ENSMUSG00000093245_AC131120.1	.	ENSMUSG00000093245	ProperStrand	77	1	-6.2367
chr7	26443672	26443715	protein_coding	Bckdha	exon	ENSMUSG00000060376	ProperStrand	14	chr8	98270014	98270073	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-8.4626
chrX	45732317	45732417	protein_coding	Bcorl1	exon	ENSMUSG00000036959	ProperStrand	36	chr3	123210854	123210870	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.9411
chr1	74526295	74533198	protein_coding	Usp37	exon	ENSMUSG00000033364	ProperStrand	47	chr18	35714194	35714239	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-3.8965
chr9	69972915	69972939	protein_coding	Fam81a	exon	ENSMUSG00000032224	ProperStrand	59	chr11	6428035	6428087	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-5.5342
chr16	17152442	17152529	protein_coding	Ube2l3	utr3	ENSMUSG00000038965	ProperStrand	29	chr9	15118245	15118321	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	5	-20.0278
chr2	57090809	57090826	protein_coding	Gpd2	utr5	ENSMUSG00000026827	ProperStrand	93	chr7	147081173	147087002	protein_coding	Kndc1	exon	ENSMUSG00000066129	ProperStrand	15	1	-15.2550
chr19	8798516	8798561	lincRNA	Snhg1	exon	ENSMUSG00000090867	ProperStrand	100	chr3	68889069	68889169	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-2.3612
chr13	98265267	98265323	lincRNA	Gm11019	exon	ENSMUSG00000078952	ProperStrand	113	mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	1	-5.1302
chr5	14252800	14252816	protein_coding	Sema3e	utr3	ENSMUSG00000063531	ProperStrand	125	chr8	32260385	32260424	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-3.2580
chr15	89384548	89384586	protein_coding	Shank3	intron	ENSMUSG00000022623	ProperStrand	19	chr11	101466273	101466351	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	2	-17.6252
chr14	14946668	14946700	protein_coding	Psmd6	exon	ENSMUSG00000021737	ProperStrand	10	chr16	23111374	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-10.9079
chr14	15572352	15572371	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr19	44188431	44188521	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	1	-5.7951
chr9	100966289	100966307	SINE	B4A	B4	chr9B4A100966214	ProperStrand	51	chr9	120039533	120039604	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.6175
chrX	91434473	91434549	protein_coding	Eif2s3x	utr3	ENSMUSG00000035150	ProperStrand	55	chr19	8800378	8800478	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-3.6910
chr7	86604657	86604729	protein_coding	Polg	exon	ENSMUSG00000039176	ProperStrand	93	chr15	5068430	5068480	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-5.2100
chr1	165710001	165710017	protein_coding	Kifap3	exon	ENSMUSG00000026585	ProperStrand	9	chr3	108357324	108357414	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-8.3481
chr11	100567780	100568176	protein_coding	Kat2a	exon	ENSMUSG00000020918	ProperStrand	68	chr19	38470680	38470698	protein_coding	Tmem20	exon	ENSMUSG00000044026	ProperStrand	4	1	-18.5084
chr4	137112597	137113101	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	chr8	98269974	98270075	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	6	-8.0931
chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	chr7	118219574	118219645	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-1.9258
chr14	55057856	55057872	protein_coding	Mmp14	exon	ENSMUSG00000000957	ProperStrand	61	chr9	119163502	119163521	protein_coding	Oxsr1	intron	ENSMUSG00000036737	ProperStrand	33	1	-14.4845
chr2	119179616	119179634	protein_coding	Chac1	utr3	ENSMUSG00000027313	ProperStrand	22	chr9	65916550	65916567	protein_coding	Snx22	exon	ENSMUSG00000039452	NonProperStrand	1	1	-inf
chr7	30066827	30066846	protein_coding	Spint2	utr5	ENSMUSG00000074227	ProperStrand	82	chr7	116664819	116664922	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.0275
chr12	113560015	113560105	LINE	L1M5	L1	chr12L1M5113560025	ProperStrand	1	chr12	113559897	113559977	LTR	MTEa	MaLR	chr12MTEa113559708	NonProperStrand	1	1	-inf
chr5	36220936	36220953	protein_coding	Ablim2	intron	ENSMUSG00000029095	ProperStrand	36	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-6.8801
chr1	16091384	16091402	protein_coding	Rpl7	utr3	ENSMUSG00000043716	ProperStrand	93	chr5	130295509	130295550	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-4.4047
chr2	25077938	25078028	protein_coding	Tubb4b	exon	ENSMUSG00000036752	ProperStrand	58	chr4	131865891	131865971	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	6	-11.7631
chr3	30497178	30497194	protein_coding	Arpm1	exon	ENSMUSG00000037737	ProperStrand	3	chr9	15119665	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-8.7352
chr17	85595059	85595076	protein_coding	1700106N22Rik	intron	ENSMUSG00000071037	ProperStrand	17	chr4	131865854	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.9909
chr7	52309977	52309993	protein_coding	Prrg2	exon	ENSMUSG00000007837	NonProperStrand	281	chr17	43201996	43202028	protein_coding	Tnfrsf21	exon	ENSMUSG00000023915	ProperStrand	36	1	-11.2494
chr5	104869364	104869408	protein_coding	Spp1	exon	ENSMUSG00000029304	ProperStrand	52	chr4	86225533	86225569	protein_coding	Haus6	utr3	ENSMUSG00000038047	ProperStrand	21	1	-15.7115
chr17	6958350	6958395	protein_coding	Ezr	exon	ENSMUSG00000052397	ProperStrand	126	chr11	6428075	6428157	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-3.4922
chr6	92104375	92104391	protein_coding	Nr2c2	exon	ENSMUSG00000005893	ProperStrand	101	chr5	38622201	38622518	protein_coding	Lyar	exon	ENSMUSG00000067367	ProperStrand	33	1	-13.4742
chr11	115646865	115647210	protein_coding	2310067B10Rik	exon	ENSMUSG00000020747	ProperStrand	74	chr4	131865855	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.4533
chr15	102239562	102239633	protein_coding	Sp1	exon	ENSMUSG00000001280	ProperStrand	124	chr19	8798780	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	6	-17.8099
chr2	16216549	16216570	Low_complexity	AT_rich	Low_complexity	chr2AT_rich16216553	ProperStrand	2	chr2	22827497	22827534	protein_coding	Abi1	intron	ENSMUSG00000058835	ProperStrand	24	2	-inf
chr13	34219336	34219426	protein_coding	Tubb2b	utr3	ENSMUSG00000045136	ProperStrand	49	chr5	111121067	111121147	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-6.8362
chr4	136106559	136106587	protein_coding	Kdm1a	utr3	ENSMUSG00000036940	ProperStrand	83	chr14	76247711	76247752	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-3.5656
chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	chr11	68886971	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	2	-1.0386
chrX	68812924	68812967	protein_coding	Hmgb3	exon	ENSMUSG00000015217	NonProperStrand	1	chr3	68829805	68829854	protein_coding	Smc4	exon	ENSMUSG00000034349	ProperStrand	21	1	-inf
chr4	114741487	114741504	protein_coding	Tal1	utr3	ENSMUSG00000028717	NonProperStrand	69	chr15	79913298	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-5.7047
chr1	163230683	163230702	DNA	Arthur1	Tip100	chr1Arthur1163230519	ProperStrand	2	chr4	131865902	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-inf
chr17	23912161	23912182	antisense	Gm16275	.	ENSMUSG00000086719	NonProperStrand	3	chr5	115848210	115848227	antisense	Gm13832	.	ENSMUSG00000087292	ProperStrand	47	1	-inf
chr19	10344418	10344435	protein_coding	Dagla	intron	ENSMUSG00000035735	ProperStrand	23	chr16	23110827	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.4133
chr1	177534080	177534101	protein_coding	Fh1	exon	ENSMUSG00000026526	ProperStrand	37	chr3	123210854	123210929	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-7.4860
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr2	26493366	26493485	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	5	-3.1684
chr11	99080965	99081023	protein_coding	Smarce1	exon	ENSMUSG00000037935	ProperStrand	38	chr17	24665421	24665483	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	2	-9.5233
chr3	86898831	86898915	protein_coding	Kirrel	intron	ENSMUSG00000041734	ProperStrand	22	chr11	74718965	74719010	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	1	-11.0553
chr3	108357267	108357357	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	chr13	23390649	23390686	tRNA	tRNA95-ValAAC	.	529709	ProperStrand	2	1	-11.9199
chr5	34112034	34112050	protein_coding	Letm1	exon	ENSMUSG00000005299	NonProperStrand	145	chr11	88705935	88705981	protein_coding	Akap1	exon	ENSMUSG00000018428	ProperStrand	45	1	-12.1226
chr12	80534083	80534187	protein_coding	Rad51l1	intron	ENSMUSG00000059060	ProperStrand	26	chr10	23506278	23506304	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-8.6254
mmu-miR-3963	3	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr6	71339135	71339228	protein_coding	Rmnd5a	utr3	ENSMUSG00000002222	ProperStrand	38	2	-11.7004
chr8	32264126	32264740	protein_coding	Tti2	exon	ENSMUSG00000031577	ProperStrand	13	chr1	162965577	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-6.2408
chr8	55615271	55615303	antisense	Spcs3	.	ENSMUSG00000054408	ProperStrand	30	chr5	27919298	27919315	protein_coding	Dpp6	intron	ENSMUSG00000061576	NonProperStrand	32	1	-15.9780
chr3	16037584	16037602	SINE	B4A	B4	chr3B4A16037383	ProperStrand	1	chr7	17395326	17395342	protein_coding	Fkrp	utr3	ENSMUSG00000048920	NonProperStrand	2	1	-inf
chr4	134926614	134927796	protein_coding	A330049M08Rik	exon	ENSMUSG00000043924	ProperStrand	130	chr4	131865855	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.5180
chr2	93784059	93784076	LTR	MTEa	MaLR	chr2MTEa93783777	NonProperStrand	50	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-5.5676
chr5	107303155	107303171	protein_coding	Hfm1	intron	ENSMUSG00000043410	ProperStrand	23	chr10	23506328	23506348	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-8.8744
chr13	46776903	46776983	protein_coding	Nup153	exon	ENSMUSG00000021374	ProperStrand	69	chr3	68889155	68889245	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-3.0052
chrX	71484994	71485084	protein_coding	Flna	exon	ENSMUSG00000031328	ProperStrand	134	chr7	116663643	116663723	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.2588
chrX	20450273	20450292	protein_coding	Syn1	intron	ENSMUSG00000037217	ProperStrand	9	chr1	162966201	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	2	-18.5226
chr2	90235319	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr16	5062715	5063040	protein_coding	Ubn1	exon	ENSMUSG00000039473	ProperStrand	35	1	-5.5085
chr15	8208054	8208154	protein_coding	2410089E03Rik	intron	ENSMUSG00000039801	ProperStrand	43	chr7	117189916	117189948	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.9505
chr8	114237293	114237351	protein_coding	Bcar1	exon	ENSMUSG00000031955	ProperStrand	44	chr8	129468773	129468863	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-5.0111
chr11	62416575	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	chr1	9932550	9932626	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	3	-2.1834
chr13	4812555	4812573	protein_coding	Gm5444	intron	ENSMUSG00000053499	ProperStrand	2	chrX	71517821	71517906	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-13.9887
chr19	56003755	56003771	protein_coding	Tcf7l2	intron	ENSMUSG00000024985	ProperStrand	103	chr8	95647054	95647071	protein_coding	Ces1c	exon	ENSMUSG00000057400	NonProperStrand	2	1	-inf
chr1	191610598	191610689	protein_coding	Ptpn14	utr5	ENSMUSG00000026604	ProperStrand	74	chr10	80642521	80642686	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	2	-9.2824
chr8	48591629	48591690	protein_coding	D030016E14Rik	intron	ENSMUSG00000038102	NonProperStrand	1	chrX	34622974	34623022	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	NonProperStrand	26	1	-inf
chr2	79132657	79132674	protein_coding-noncoding	Itga4	utr5	ENSMUSG00000027009	NonProperStrand	118	chr1	63225577	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-5.3402
chr1	23821593	23821611	protein_coding	B3gat2	intron	ENSMUSG00000026156	ProperStrand	4	chr6	125057567	125057596	protein_coding	Chd4	exon	ENSMUSG00000063870	ProperStrand	303	1	-15.7379
chr11	106363958	106363978	protein_coding	Tex2	utr3	ENSMUSG00000040548	ProperStrand	24	chr12	55835615	55835705	snRNA	ENSMUSG00000075960_U1	.	ENSMUSG00000075960	ProperStrand	210	2	-19.5335
chrX	13269163	13269180	protein_coding	Cask	intron	ENSMUSG00000031012	ProperStrand	41	chr18	73693165	73693189	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-6.2740
chr11	3027517	3027560	pseudogene	Pisd-ps1	.	ENSMUSG00000082286	ProperStrand	14	chr4	131908809	131908881	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.6665
chr7	20351024	20352093	protein_coding	Bcam	exon	ENSMUSG00000002980	ProperStrand	43	chr4	63209708	63211002	protein_coding	Atp6v1g1	exon	ENSMUSG00000039105	ProperStrand	10	6	-inf
chr8	125731931	125732931	protein_coding	Chmp1a	exon	ENSMUSG00000000743	ProperStrand	4	chr9	120038467	120038548	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-8.5118
chr2	179914865	179915038	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr15	5068423	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-2.6748
chr18	89387605	89387621	protein_coding	Cd226	intron	ENSMUSG00000034028	ProperStrand	47	chr7	29136525	29136574	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.7863
chr4	118809361	118809399	protein_coding	Slc2a1	utr3	ENSMUSG00000028645	ProperStrand	361	chr8	129468773	129468863	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-1.3368
chr9	110843229	110845136	protein_coding	Tdgf1	exon	ENSMUSG00000032494	ProperStrand	218	chr11	97642952	97642987	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	4	-3.4238
chr2	84882449	84882916	protein_coding	Ssrp1	exon	ENSMUSG00000027067	ProperStrand	118	chr1	46132972	46133028	protein_coding	Dnahc7b	intron	ENSMUSG00000041144	NonProperStrand	57	1	-12.0586
chr11	57992948	57992965	protein_coding	Mrpl22	exon	ENSMUSG00000020514	ProperStrand	13	chr19	8963085	8963175	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	11	-inf
chr5	112758435	112758451	protein_coding	Tfip11	exon	ENSMUSG00000029345	ProperStrand	111	chr2	69704620	69704674	protein_coding	Ssb	exon	ENSMUSG00000068882	ProperStrand	37	1	-13.0553
chr4	151162889	151162974	protein_coding	Camta1	intron	ENSMUSG00000014592	ProperStrand	170	chr11	6519851	6519941	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	7	-20.3976
chr4	82907938	82907970	protein_coding	Ttc39b	intron	ENSMUSG00000038172	ProperStrand	78	chr16	23110454	23110508	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.0259
chr7	29171540	29171558	protein_coding	Med29	utr3	ENSMUSG00000003444	NonProperStrand	134	chr4	147828661	147828677	protein_coding	Mtor	exon	ENSMUSG00000028991	NonProperStrand	13	1	-14.8163
chr18	10052133	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr4	115243472	115243576	protein_coding	Cyp4a31	exon	ENSMUSG00000028712	ProperStrand	61	1	-8.7678
chr13	84393924	84393941	protein_coding	Tmem161b	intron	ENSMUSG00000035762	NonProperStrand	5	chr16	23110828	23110872	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr17	45705201	45705259	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr7	112767670	112767720	protein_coding	Trim3	exon	ENSMUSG00000036989	ProperStrand	11	3	-inf
chr9	45717433	45717482	protein_coding	Pcsk7	exon	ENSMUSG00000035382	ProperStrand	8	chr3	123210894	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.8655
chr7	134416510	134416560	protein_coding	Sephs2	exon	ENSMUSG00000049091	ProperStrand	15	chr15	79913288	79913355	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-6.2900
chr12	73884943	73884965	protein_coding	Ppm1a	exon	ENSMUSG00000021096	ProperStrand	53	chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-6.7001
chr14	56159295	56159313	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	chr1	181027187	181027205	protein_coding	Smyd3	intron	ENSMUSG00000055067	ProperStrand	231	1	-8.2416
chr9	88345613	88345631	protein_coding	Syncrip	utr3	ENSMUSG00000032423	ProperStrand	35	chr13	23663296	23663321	protein_coding	Hist1h2bg	utr5	ENSMUSG00000058385	ProperStrand	29	1	-15.9113
chr4	116276578	116283881	protein_coding	Nasp	exon	ENSMUSG00000028693	ProperStrand	64	chrX	34622906	34623021	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-5.2733
chr15	51629249	51630818	protein_coding	Eif3h	exon	ENSMUSG00000022312	ProperStrand	45	chr5	130295419	130295499	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	3	-13.4625
chr15	83770046	83770063	protein_coding	Efcab6	intron	ENSMUSG00000022441	ProperStrand	60	chr7	13516162	13516208	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	1	-8.6664
chr2	130330338	130330365	protein_coding	Ptpra	intron	ENSMUSG00000027303	ProperStrand	24	chr5	121655017	121655107	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.5126
chr8	44439336	44439420	LTR	BGLII	ERVK	chr8BGLII44439112	ProperStrand	1	chr6	125136376	125136400	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	1	-inf
chr4	140862436	140864349	protein_coding	Epha2	exon	ENSMUSG00000006445	ProperStrand	148	chr15	57978170	57978250	snoRNA	ENSMUSG00000080461_SNORA11	.	ENSMUSG00000080461	ProperStrand	171	1	-9.4013
chr6	77184088	77184105	protein_coding	Ctnna2	intron	ENSMUSG00000063063	NonProperStrand	9	chr11	6428100	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-6.9084
chr1	182521376	182523041	protein_coding	Parp1	exon	ENSMUSG00000026496	ProperStrand	227	chr1	162965981	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	4	-5.7843
chr10	77497231	77497345	protein_coding	Aire	exon	ENSMUSG00000000731	ProperStrand	8	chr8	116318622	116318639	protein_coding	Adamts18	intron	ENSMUSG00000053399	ProperStrand	3	1	-21.9894
chr17	28460471	28460490	protein_coding	Fance	intron	ENSMUSG00000007570	NonProperStrand	2	chr7	107995344	107995434	protein_coding	Relt	utr3	ENSMUSG00000008318	NonProperStrand	5	1	-21.6030
chr6	119525727	119544810	protein_coding	Erc1	exon	ENSMUSG00000030172	ProperStrand	69	chr4	131908689	131908754	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-4.8029
chr17	39980024	39980114	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr19	40440608	40440628	protein_coding	Sorbs1	intron	ENSMUSG00000025006	NonProperStrand	16	4	-19.3511
chr10	76226023	76226040	protein_coding	Pcbp3	exon	ENSMUSG00000001120	NonProperStrand	10	chr12	88778723	88778756	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-10.1385
chr4	149478985	149479075	protein_coding	Gpr157	utr3	ENSMUSG00000047875	NonProperStrand	11	chr18	33954816	33954908	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	6	-19.9424
chr11	97642951	97643038	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	chr16	38158105	38158229	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	9	-3.5060
chr14	35124050	35124119	protein_coding	Glud1	utr5	ENSMUSG00000021794	ProperStrand	72	chr4	128906061	128906133	protein_coding	C77080	intron	ENSMUSG00000050390	ProperStrand	48	1	-13.3966
chr8	126416292	126416310	protein_coding	Acta1	exon	ENSMUSG00000031972	ProperStrand	1	chr2	144087419	144087463	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-inf
chrX	70703396	70703412	protein_coding	Haus7	exon	ENSMUSG00000031371	NonProperStrand	18	chr1	162966189	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-10.0092
chr7	52084726	52084769	protein_coding	Nup62	exon	ENSMUSG00000043858	ProperStrand	47	chr3	89750435	89750451	protein_coding	Atp8b2	exon	ENSMUSG00000060671	ProperStrand	140	1	-12.1048
chr16	17894461	17894477	protein_coding	Tssk1	exon	ENSMUSG00000041566	NonProperStrand	62	chr17	24665419	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-4.8773
chr2	26334133	26334217	protein_coding	Notch1	exon	ENSMUSG00000026923	ProperStrand	145	chr11	69483136	69483182	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.1050
chr10	79191829	79191846	protein_coding	Hcn2	exon	ENSMUSG00000020331	NonProperStrand	4	chr5	108336363	108336412	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-10.4876
chr19	42199431	42199447	protein_coding	Avpi1	exon	ENSMUSG00000018821	NonProperStrand	9	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-10.8532
chr2	179911989	179912051	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	1	-5.0336
chr7	4694665	4694709	protein_coding	Suv420h2	exon	ENSMUSG00000059851	ProperStrand	60	chr7	117166797	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	4	-15.1054
chr7	50690726	50690742	protein_coding	Lim2	exon	ENSMUSG00000004613	NonProperStrand	50	chr19	46729703	46729752	protein_coding	D19Wsu162e	utr3	ENSMUSG00000047731	ProperStrand	16	1	-16.3845
chr2	32818804	32818884	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	chr11	98878343	98878433	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	7	-4.0183
chr3	87851537	87851583	protein_coding	Gpatch4	intron	ENSMUSG00000028069	ProperStrand	2	chr10	23505152	23505185	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-8.0476
chr13	31936259	31936278	protein_coding	Gmds	intron	ENSMUSG00000038372	ProperStrand	27	chr9	15119646	15119736	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.0899
chr2	87659652	87659712	SINE	B2_Mm1a	B2	chr2B2_Mm1a87659591	ProperStrand	2	chr18	60908196	60908227	protein_coding	Ndst1	utr5	ENSMUSG00000054008	ProperStrand	38	2	-inf
chr16	4320047	4320065	protein_coding	Adcy9	intron	ENSMUSG00000005580	ProperStrand	25	chr17	39985195	39985225	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-7.6779
chr10	80823940	80824081	protein_coding	Mfsd12	exon	ENSMUSG00000034854	ProperStrand	7	chr14	76956323	76956339	protein_coding	Serp2	utr5	ENSMUSG00000052584	NonProperStrand	41	1	-19.0538
chrX	130496426	130496668	protein_coding	Sytl4	exon	ENSMUSG00000031255	ProperStrand	169	chr11	69483206	69483264	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-0.9136
chr2	90235314	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	68287382	68287398	protein_coding	Pik3r5	exon	ENSMUSG00000020901	NonProperStrand	4	1	-10.0500
chr10	95499367	95499383	protein_coding	Eea1	utr3	ENSMUSG00000036499	ProperStrand	82	chr7	117190013	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.7735
chr8	125627102	125627147	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	chr1	33828651	33828669	protein_coding	Zfp451	intron	ENSMUSG00000042197	NonProperStrand	393	1	-6.8631
chr11	32543234	32543256	protein_coding	Fbxw11	intron	ENSMUSG00000020271	ProperStrand	36	chr19	8963032	8963048	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-11.1862
chr6	124664287	124664312	protein_coding-noncoding	Phb2	utr5	ENSMUSG00000004264	ProperStrand	8	chr4	86232349	86232409	snoRNA	ENSMUSG00000088958_Scarna8	.	ENSMUSG00000088958	ProperStrand	366	1	-13.8267
chr4	116826926	116826972	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	chr14	33005139	33005218	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	3	-4.3094
chr10	80809668	80809684	protein_coding	Hmg20b	exon	ENSMUSG00000020232	ProperStrand	157	chr4	108745425	108745475	protein_coding	Osbpl9	exon	ENSMUSG00000028559	ProperStrand	17	1	-13.9505
chr3	67850452	67850470	protein_coding	Iqcj	intron	ENSMUSG00000051777	NonProperStrand	5	chr9	120038466	120038543	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	NonProperStrand	28	1	-19.2492
chr5	74489202	74489254	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr5	125077278	125077294	protein_coding	Tctn2	utr3	ENSMUSG00000029386	NonProperStrand	22	1	-7.6211
chr3	64202504	64210079	protein_coding	Vmn2r4	exon	ENSMUSG00000092049	NonProperStrand	2	chr8	73419682	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-10.3981
chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	chr16	90386835	90386853	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	1	-8.6555
chr2	163691197	163691287	protein_coding	Rims4	exon	ENSMUSG00000035226	ProperStrand	7	chr7	148634754	148634834	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-8.2990
chr9	78327196	78328474	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr7	117189947	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	27	-13.4312
chr19	4835648	4835738	protein_coding	Ccs	intron	ENSMUSG00000034108	ProperStrand	5	chr18	35716769	35716849	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-6.9999
chr2	35370544	35370634	SINE	B3A	B2	chr2B3A35370493	ProperStrand	1	chr2	35370400	35370480	SINE	ID_B1	B4	chr2ID_B135370288	ProperStrand	1	1	-inf
chr5	111778441	111778462	protein_coding	Pitpnb	intron	ENSMUSG00000050017	ProperStrand	137	chr4	131866238	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-2.2087
chr7	24779190	24779213	SINE	ID_B1	B4	chr7ID_B124779183	NonProperStrand	54	chr4	123341728	123341744	protein_coding	Macf1	exon	ENSMUSG00000028649	ProperStrand	320	1	-10.1709
chr16	4954204	4954251	protein_coding	Anks3	intron	ENSMUSG00000022515	ProperStrand	4	chr18	33954826	33954916	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-9.0265
chr9	103257393	103257443	protein_coding	Cdv3	utr3	ENSMUSG00000032803	ProperStrand	68	chr9	15119658	15119758	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.4150
chr12	112325355	112325455	protein_coding	Rcor1	intron	ENSMUSG00000037896	ProperStrand	20	chr3	123210866	123210901	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-4.0323
chr1	84885006	84885083	protein_coding	Fbxo36	intron	ENSMUSG00000073633	ProperStrand	3	chr11	97642952	97642985	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-8.5513
chr11	119780033	119780121	protein_coding	Chmp6	utr3	ENSMUSG00000025371	ProperStrand	4	chr2	148233000	148233017	protein_coding	Thbd	exon	ENSMUSG00000074743	ProperStrand	4	1	-inf
chr5	115956842	115956858	protein_coding	Pxn	utr5	ENSMUSG00000029528	ProperStrand	171	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-9.5851
chr19	9047450	9047530	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	chr3	108357255	108357345	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-1.2530
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr18	32239852	32239927	protein_coding	Iws1	exon	ENSMUSG00000024384	ProperStrand	72	3	-13.8347
chr13	101508992	101509082	protein_coding	Mrps36	exon	ENSMUSG00000061474	ProperStrand	5	chr9	120039533	120039558	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-8.3145
chr1	13127520	13127600	LTR	MERVL-int	ERVL	chr1MERVL-int13126693	ProperStrand	1	chr13	45003886	45003976	protein_coding	Jarid2	intron	ENSMUSG00000038518	NonProperStrand	13	1	-inf
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr17	35299507	35299642	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	8	-7.6120
chr11	115885331	115885747	protein_coding	H3f3b	utr5	ENSMUSG00000016559	ProperStrand	76	chr9	110845663	110845702	protein_coding	Tdgf1	exon	ENSMUSG00000032494	ProperStrand	218	1	-10.2508
chr17	88414944	88464362	protein_coding	Fbxo11	exon	ENSMUSG00000005371	ProperStrand	15	chr4	131908689	131908724	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.5353
chr1	134228451	134228551	protein_coding	Nuak2	exon	ENSMUSG00000009772	ProperStrand	11	chr4	131865931	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.8470
chrX	150123679	150123695	protein_coding	Kctd12b	exon	ENSMUSG00000041633	ProperStrand	1	chr4	131865869	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr8	73051744	73051761	protein_coding	Fkbp8	utr5	ENSMUSG00000019428	ProperStrand	52	chr5	108336363	108336401	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-5.1583
chr11	57539180	57539227	protein_coding	Galnt10	utr3	ENSMUSG00000020520	ProperStrand	4	chr2	22444059	22444126	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-13.4435
chr3	82707847	82707863	antisense	4930564K09Rik	.	ENSMUSG00000086273	ProperStrand	48	chr16	23109027	23109067	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-7.7273
chr9	15514257	15514276	protein_coding	Slc36a4	exon	ENSMUSG00000043885	ProperStrand	94	chr1	162966190	162966219	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-6.6843
chr10	127521234	127521271	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	chr6	125136467	125136567	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	1	-2.2326
chr6	54379743	54379760	lincRNA	9130019P16Rik	exon	ENSMUSG00000073067	ProperStrand	255	chr4	118809314	118809376	protein_coding	Slc2a1	utr3	ENSMUSG00000028645	ProperStrand	361	1	-6.8355
chr1	15833220	15833264	protein_coding	Terf1	utr3	ENSMUSG00000025925	ProperStrand	19	chr8	113366285	113366310	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	2	-18.1982
chr5	65210079	65210095	protein_coding	Klf3	intron	ENSMUSG00000029178	ProperStrand	56	chr13	96100538	96100569	protein_coding	Zbed3	intron	ENSMUSG00000041995	ProperStrand	33	1	-14.6483
chr6	87744643	87744661	protein_coding	Rab43	exon	ENSMUSG00000030055	ProperStrand	8	chr18	35714144	35714247	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-7.4301
chr19	5802119	5802147	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr5	111121065	111121083	protein_coding-noncoding	Ep400	utr3	ENSMUSG00000029505	ProperStrand	3	1	-13.9097
chr15	82725597	82725614	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	chr17	13115684	13115783	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	5	-12.9580
chr11	6428040	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr1	88247743	88247875	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	26	-2.5382
chrX	53730469	53730559	protein_coding	Ddx26b	intron	ENSMUSG00000035967	ProperStrand	11	chr8	129468765	129468845	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-7.7956
chr17	13115655	13115778	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	chr8	113362431	113362468	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	1	-3.6195
chr2	26768395	26768433	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	chr8	113362450	113362512	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	2	-3.4786
chr2	152219856	152219956	protein_coding	Sox12	utr3	ENSMUSG00000051817	ProperStrand	31	chr16	23111374	23111445	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-6.1924
chr11	72204834	72204890	protein_coding	Smtnl2	exon	ENSMUSG00000045667	ProperStrand	30	chr4	131908236	131908298	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.5256
chr2	32818883	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	chr9	40611666	40611723	snoRNA	ENSMUSG00000075876_Snord14c	.	ENSMUSG00000075876	ProperStrand	104	3	-10.5633
chr5	36806752	36806770	lincRNA	2210406O10Rik	intron	ENSMUSG00000039563	NonProperStrand	3	chr7	116664821	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-8.6415
chr12	59221567	59221683	LINE	L1Md_A	L1	chr12L1Md_A59220784	ProperStrand	1	chr16	23111738	23111787	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-inf
chr18	74602459	74729434	protein_coding	Myo5b	exon	ENSMUSG00000025885	NonProperStrand	5	chr8	73419703	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	NonProperStrand	53	1	-18.1807
chr4	147291425	147291451	protein_coding	Plod1	exon	ENSMUSG00000019055	ProperStrand	8	chr10	63621197	63621214	protein_coding	Ctnna3	intron	ENSMUSG00000060843	NonProperStrand	22	1	-18.6665
chr8	125626950	125627005	snoRNA	ENSMUSG00000064450_Snord68	.	ENSMUSG00000064450	ProperStrand	181	chr1	89673598	89673698	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-1.4363
chr4	153534306	153534353	protein_coding	Tprgl	exon	ENSMUSG00000029030	ProperStrand	50	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-8.5446
chr1	127303939	127305136	protein_coding	Actr3	exon	ENSMUSG00000026341	ProperStrand	45	chr17	24857796	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	3	-7.2543
chr3	30146116	30146134	protein_coding	Mecom	intron	ENSMUSG00000027684	NonProperStrand	23	chr9	72594936	72594999	protein_coding	Nedd4	exon	ENSMUSG00000032216	ProperStrand	308	1	-11.9765
chr8	125658463	125658480	protein_coding	Cpne7	utr3	ENSMUSG00000034796	ProperStrand	4	chr7	52118531	52118604	protein_coding	Ptov1	utr3	ENSMUSG00000038502	ProperStrand	26	1	-19.1369
chr17	23965904	23965932	protein_coding	Tceb2	exon	ENSMUSG00000055839	ProperStrand	12	chr5	121655016	121655126	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-6.9120
chr11	94853508	94853525	protein_coding	Ppp1r9b	exon	ENSMUSG00000038976	ProperStrand	27	chr17	71980620	71980681	snoRNA	ENSMUSG00000093289_Snord92	.	ENSMUSG00000093289	ProperStrand	56	1	-15.0770
chr4	57375690	57375706	lincRNA	1700042G15Rik	intron	ENSMUSG00000087044	NonProperStrand	5	chr17	56753584	56753635	protein_coding	Rpl36	exon	ENSMUSG00000057863	ProperStrand	62	1	-18.5961
chr7	104173612	104173702	protein_coding	Nars2	intron	ENSMUSG00000018995	ProperStrand	6	chr2	26494719	26494799	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-7.6788
chr2	125548901	125548917	protein_coding	Shc4	exon	ENSMUSG00000035109	ProperStrand	19	chr16	23111373	23111445	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.1411
chr8	125626633	125626805	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	chr12	55797773	55797853	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	1	-5.0467
chr4	63155962	63156008	protein_coding	Whrn	exon	ENSMUSG00000039137	ProperStrand	20	chr16	23110838	23110928	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-6.8326
chr7	116663748	116663769	protein_coding-noncoding	Rpl27a	utr5	ENSMUSG00000046364	ProperStrand	57	chr5	121655015	121655100	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	4	-12.6120
chr2	158182201	158182280	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	chr11	51551280	51551336	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	7	-6.7780
chr4	137866780	137866809	protein_coding	Ddost	exon	ENSMUSG00000028757	ProperStrand	49	chr13	34436854	34436870	protein_coding	Slc22a23	utr5	ENSMUSG00000038267	ProperStrand	95	1	-12.8000
chr10	79412316	79413414	protein_coding	Arid3a	exon	ENSMUSG00000019564	ProperStrand	16	chr8	77523744	77523760	protein_coding	Hmgxb4	exon	ENSMUSG00000034518	ProperStrand	25	1	-17.5947
chr11	68922008	68922593	protein_coding	Per1	exon	ENSMUSG00000020893	ProperStrand	46	chr1	162965981	162966003	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-4.1008
chr9	15110718	15112262	protein_coding	Taf1d	utr5	ENSMUSG00000031939	ProperStrand	363	chr19	8799832	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-1.7383
chr12	110884939	110884960	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr14	31384399	31384426	protein_coding	Tkt	exon	ENSMUSG00000021957	ProperStrand	160	1	-6.7151
chr11	69200878	69200968	LTR	ORR1A2	MaLR	chr11ORR1A269200794	NonProperStrand	1	chr1	3646185	3646275	protein_coding	Xkr4	intron	ENSMUSG00000051951	ProperStrand	59	1	-inf
chr5	145942670	145942701	protein_coding	Cpsf4	utr3	ENSMUSG00000029625	ProperStrand	15	chr11	6519810	6519880	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	4	-22.6467
chr5	108177433	108193736	protein_coding	Evi5	utr3	ENSMUSG00000011831	ProperStrand	18	chr18	35716813	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.3552
chr17	28033014	28033030	protein_coding	Uhrf1bp1	utr3	ENSMUSG00000039512	ProperStrand	79	chr8	32260371	32260423	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-4.1064
chr7	26015644	26015670	protein_coding	Gsk3a	exon	ENSMUSG00000057177	ProperStrand	14	chr16	23110911	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.2008
chr12	110888922	110888948	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr7	109162054	109162133	protein_coding	Numa1	exon	ENSMUSG00000066306	ProperStrand	148	1	-6.8690
chr7	108971290	108971306	protein_coding	Inppl1	utr3	ENSMUSG00000032737	ProperStrand	272	chr2	113688309	113688370	protein_coding	Arhgap11a	utr5	ENSMUSG00000041219	ProperStrand	47	1	-10.7756
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr15	79136715	79136762	protein_coding	Pla2g6	exon	ENSMUSG00000042632	ProperStrand	32	1	-8.1826
chr6	71542083	71542183	protein_coding	Kdm3a	exon	ENSMUSG00000053470	ProperStrand	41	chr16	23110457	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-5.4046
chr2	160721184	160721200	protein_coding	Lpin3	exon	ENSMUSG00000027412	ProperStrand	31	chr4	140258108	140258256	protein_coding	Rcc2	exon	ENSMUSG00000040945	ProperStrand	228	1	-11.9702
chrX	35796588	35796668	protein_coding	Lamp2	intron	ENSMUSG00000016534	ProperStrand	19	chr4	131865888	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	7	-inf
chr16	77014889	77014905	protein_coding	Usp25	intron	ENSMUSG00000022867	ProperStrand	9	chr8	73419743	73419776	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-6.8403
chr19	30211582	30211608	protein_coding	Gldc	exon	ENSMUSG00000024827	ProperStrand	175	chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	4	-18.5775
chr4	97812275	97812291	protein_coding	Nfia	intron	ENSMUSG00000028565	NonProperStrand	74	chr11	97642955	97643007	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.1210
chr16	26504951	26504967	protein_coding	Tmem207	exon	ENSMUSG00000091972	NonProperStrand	34	chr3	123210895	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.0438
chr10	77639875	77640504	protein_coding	Pwp2	exon	ENSMUSG00000032834	NonProperStrand	8	chr8	32260356	32260428	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-8.6916
chr6	95795595	95795675	LTR	RMER16-int	ERVK	chr6RMER16-int95794861	NonProperStrand	1	chr6	95450054	95450144	protein_coding	Suclg2	intron	ENSMUSG00000061838	ProperStrand	35	1	-inf
chr7	104024843	104024860	protein_coding	Odz4	intron	ENSMUSG00000048078	ProperStrand	93	chr19	8963023	8963085	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-2.9420
chr3	88952697	88952713	protein_coding	Hcn3	exon	ENSMUSG00000028051	ProperStrand	40	chr12	17552948	17552995	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-5.8830
chr13	54653433	54653523	protein_coding	4833439L19Rik	utr3	ENSMUSG00000025871	ProperStrand	14	chr5	108336381	108336461	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-7.7830
chr5	24763319	24764664	protein_coding	Galnt11	exon	ENSMUSG00000038072	ProperStrand	8	chr9	120037910	120037979	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-8.7708
chr1	93182379	93182418	protein_coding	Ube2f	utr3	ENSMUSG00000034343	ProperStrand	8	chr7	116663681	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-15.1552
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr1	173041600	173041649	tRNA	tRNA710-ValCAC	.	803879	ProperStrand	206	4	-18.3417
chr4	15871709	15871740	protein_coding-noncoding	Decr1	utr3	ENSMUSG00000028223	ProperStrand	1	chr15	79908956	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-inf
chr2	25148602	25148681	protein_coding	Grin1	intron	ENSMUSG00000026959	ProperStrand	9	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.8692
mmu-miR-6240	4	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr5	121656755	121656778	protein_coding	Rpl6	exon	ENSMUSG00000029614	ProperStrand	332	1	-2.6941
chr5	110754678	110754696	protein_coding	Pole	exon	ENSMUSG00000007080	ProperStrand	125	chr11	69804977	69804993	protein_coding	Gabarap	utr5	ENSMUSG00000018567	ProperStrand	24	1	-13.6933
mmu-miR-6240	2	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr12	99756958	99756975	protein_coding	Kcnk10	exon	ENSMUSG00000033854	NonProperStrand	37	1	-6.8616
chr14	56162899	56163301	protein_coding	Pck2	exon	ENSMUSG00000040618	ProperStrand	18	chr8	73419683	73419783	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-8.9548
chr10	80318032	80318049	protein_coding	3110056O03Rik	utr5	ENSMUSG00000035206	ProperStrand	11	chr4	131865866	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.8470
chr14	49698528	49698563	protein_coding	Mudeng	exon	ENSMUSG00000036291	ProperStrand	4	chr1	162965548	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-8.7752
chr9	59526683	59526782	protein_coding	Pkm2	utr3	ENSMUSG00000032294	ProperStrand	1296	chr11	53230007	53230024	protein_coding	Aff4	utr3	ENSMUSG00000049470	ProperStrand	94	5	-19.1373
chr6	4571136	4571153	protein_coding	Casd1	exon	ENSMUSG00000015189	NonProperStrand	2	chr18	35716753	35716831	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-9.2832
chr10	79174379	79174450	protein_coding	Bsg	utr3	ENSMUSG00000023175	ProperStrand	107	chr11	69483237	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.5267
chr15	10406250	10406350	protein_coding	Brix1	exon	ENSMUSG00000022247	ProperStrand	32	chr3	82816756	82816774	protein_coding	Fgg	exon	ENSMUSG00000033860	NonProperStrand	321	1	-11.2213
chr5	74489209	74489289	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr17	65930118	65931940	protein_coding	Vapa	exon	ENSMUSG00000024091	ProperStrand	24	2	-11.9771
chr7	118663603	118663619	protein_coding	Galntl4	exon	ENSMUSG00000038296	ProperStrand	12	chr4	131908798	131908863	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.9639
chr1	75484537	75484553	protein_coding	Obsl1	exon	ENSMUSG00000026211	NonProperStrand	192	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-0.8534
chr14	52605698	52605783	protein_coding	Arhgef40	intron	ENSMUSG00000004562	ProperStrand	5	chr11	68853923	68853959	tRNA	tRNA396-ProCGG	.	1438342	ProperStrand	48	1	-18.4151
chr15	82980101	82980225	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr16	23110454	23110574	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	20	-5.7099
chr1	24036021	24036081	protein_coding	Fam135a	exon	ENSMUSG00000026153	ProperStrand	8	chr3	103607040	103607056	protein_coding	Dclre1b	exon	ENSMUSG00000027845	NonProperStrand	4	1	-19.5686
chr1	174492230	174492246	protein_coding	Vsig8	exon	ENSMUSG00000049598	ProperStrand	27	chr5	122691914	122691930	protein_coding	Hvcn1	utr3	ENSMUSG00000064267	ProperStrand	182	1	-12.7034
chr5	73488788	73563238	protein_coding	Fryl	exon	ENSMUSG00000070733	ProperStrand	173	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	2	-5.4937
chr8	93542424	93542471	protein_coding	Chd9	intron	ENSMUSG00000056608	ProperStrand	35	chr8	98269966	98270000	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-6.6063
chr8	109193267	109193312	protein_coding	Cdh1	utr3	ENSMUSG00000000303	ProperStrand	283	chr8	97227893	97227943	tRNA	tRNA1008-LeuCAG	.	465010	ProperStrand	18	3	-18.8575
chr6	86885447	86885464	protein_coding	Aak1	exon	ENSMUSG00000057230	ProperStrand	22	chr16	23111758	23111813	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.6613
chr9	65401189	65401269	SINE	ID_B1	B4	chr9ID_B165401177	ProperStrand	1	chr9	65401525	65401615	SINE	PB1D7	Alu	chr9PB1D765401533	ProperStrand	1	1	-inf
chr2	130265237	130265253	protein_coding	Vps16	exon	ENSMUSG00000027411	NonProperStrand	4	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-11.5063
chr2	32881629	32881645	protein_coding	Garnl3	exon	ENSMUSG00000038860	NonProperStrand	54	chr3	123210914	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.2397
chr4	108686351	108686441	protein_coding	Nrd1	exon	ENSMUSG00000053510	ProperStrand	76	chr5	130300458	130300538	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	6	-12.8822
chr9	59170558	59170575	protein_coding	Bbs4	utr3	ENSMUSG00000025235	NonProperStrand	17	chr12	17552949	17553029	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-7.6001
chr8	3454232	3454275	protein_coding	Arhgef18	exon	ENSMUSG00000004568	ProperStrand	26	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.4162
mmu-miR-6240	2	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr19	38869531	38869547	protein_coding	Noc3l	exon	ENSMUSG00000024999	NonProperStrand	149	1	-4.1490
chr4	150282457	150282503	protein_coding	Park7	exon	ENSMUSG00000028964	ProperStrand	9	chr16	23110894	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-5.3337
chr7	149170854	149171340	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	chr4	131865856	131865978	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.0612
chr1	24002837	24002870	protein_coding	1110058L19Rik	utr3	ENSMUSG00000026154	ProperStrand	1	chr19	8963027	8963044	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-inf
chr4	151433407	151433423	protein_coding	Nol9	utr3	ENSMUSG00000028948	ProperStrand	93	chr9	78327195	78327263	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-5.4741
chr4	131866610	131866676	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	chr10	110918549	110918648	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	4	-2.5229
chr8	3642156	3642172	protein_coding	Stxbp2	intron	ENSMUSG00000004626	NonProperStrand	73	chr17	35088961	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-5.4836
chr2	26451868	26451884	protein_coding	Gm20532	intron	ENSMUSG00000092356	ProperStrand	46	chr11	62418013	62418066	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-6.0796
chr15	81354775	81354791	SINE	B3A	B2	chr15B3A81354761	ProperStrand	16	chr1	162965531	162965578	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.8202
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr16	37384897	37384913	protein_coding	Stxbp5l	utr5	ENSMUSG00000022829	ProperStrand	332	2	-4.6965
chr9	44639325	44639415	protein_coding	Mll1	exon	ENSMUSG00000002028	ProperStrand	151	chr12	104006304	104006357	protein_coding	Ubr7	exon	ENSMUSG00000041712	ProperStrand	46	1	-11.9974
chr9	66255883	66255899	protein_coding	Herc1	exon	ENSMUSG00000038664	NonProperStrand	35	chr4	131865384	131865440	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-5.0359
chr19	8786359	8786387	protein_coding	Slc3a2	exon	ENSMUSG00000010095	ProperStrand	63	chr18	35716845	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.0896
chrX	45788962	45788979	protein_coding	Elf4	intron	ENSMUSG00000031103	NonProperStrand	49	chr6	147040839	147050091	protein_coding	Klhdc5	exon	ENSMUSG00000040102	ProperStrand	13	1	-16.8515
chr10	127713932	127713995	protein_coding	Stat2	utr5	ENSMUSG00000040033	ProperStrand	7	chr2	26494767	26494800	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-7.3461
chr18	60848626	60848666	protein_coding	Ndst1	utr3	ENSMUSG00000054008	ProperStrand	38	chr10	23505152	23505204	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.9123
chr7	135009337	135009366	protein_coding	Zfp668	utr3	ENSMUSG00000049728	NonProperStrand	4	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-17.5900
chr6	85414775	85414828	protein_coding	Cct7	exon	ENSMUSG00000030007	ProperStrand	173	chr7	52382755	52382803	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-4.6847
chr17	45561470	45561501	protein_coding	Cdc5l	exon	ENSMUSG00000023932	ProperStrand	59	chr4	131865860	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.7940
chr5	32455479	32455495	protein_coding	Fosl2	exon	ENSMUSG00000029135	NonProperStrand	4	chr17	23955998	23956098	protein_coding	Srrm2	utr3	ENSMUSG00000039218	ProperStrand	521	1	-14.6663
chr12	34068691	34068707	lincRNA	4930556N08Rik	exon	ENSMUSG00000085664	NonProperStrand	6	chr16	23110852	23110942	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-10.1290
chr11	47457217	47457234	protein_coding	Sgcd	intron	ENSMUSG00000020354	ProperStrand	24	chr12	72290589	72290638	protein_coding	2700049A03Rik	exon	ENSMUSG00000034601	ProperStrand	21	1	-17.2299
chr11	75565507	75565554	protein_coding	Ywhae	exon	ENSMUSG00000020849	ProperStrand	176	chr15	101926068	101926136	protein_coding	Eif4b	utr3	ENSMUSG00000058655	ProperStrand	484	1	-6.9893
chr9	39652384	39652464	LINE	L1Md_F2	L1	chr9L1Md_F239652301	NonProperStrand	1	chr9	39651974	39652064	LINE	Lx4B	L1	chr9Lx4B39651804	NonProperStrand	1	1	-inf
chr18	38104577	38104658	protein_coding	Hdac3	exon	ENSMUSG00000024454	ProperStrand	12	chr7	116663649	116663739	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	4	-17.7387
chr4	115484059	115484085	protein_coding	Atpaf1	utr3	ENSMUSG00000028710	ProperStrand	202	chr18	35714145	35714245	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	4	-5.9112
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr4	131866155	131866245	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-3.5172
chr7	31368773	31369007	protein_coding	Wbp7	exon	ENSMUSG00000006307	ProperStrand	180	chr2	145076803	145209253	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-5.5551
chr10	77055684	77056631	protein_coding	Pttg1ip	exon	ENSMUSG00000009291	ProperStrand	28	chr11	116535488	116535534	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	1	-7.4276
chr5	34264663	34278705	protein_coding	Whsc2	exon	ENSMUSG00000029111	ProperStrand	9	chr2	26494708	26494807	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-6.8145
chr14	55544403	55544421	protein_coding	Efs	utr5	ENSMUSG00000022203	NonProperStrand	8	chr5	108334194	108334246	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-8.8896
chr8	113560959	113569466	protein_coding	Aars	exon	ENSMUSG00000031960	ProperStrand	355	chr17	24857717	24857822	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	3	-0.9391
chr5	117966080	117966097	protein_coding	Ksr2	intron	ENSMUSG00000061578	NonProperStrand	15	chr17	13112463	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	2	-11.8448
chr3	89549684	89549774	protein_coding-noncoding	Adar	utr5	ENSMUSG00000027951	NonProperStrand	1	chr3	89549836	89550489	protein_coding	Adar	exon	ENSMUSG00000027951	NonProperStrand	3	1	-inf
chr6	148303589	148303689	protein_coding	Rps4y2	exon	ENSMUSG00000063171	ProperStrand	47	chr18	35714146	35714216	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-3.8965
chr17	36026475	36027879	protein_coding	Dhx16	exon	ENSMUSG00000024422	ProperStrand	28	chr11	97642996	97643076	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.8483
chr8	46112076	46112176	protein_coding	Fat1	exon	ENSMUSG00000070047	ProperStrand	306	chr9	15118323	15118377	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	3	-2.9251
chr3	98853760	98853804	lincRNA	Gm12440	exon	ENSMUSG00000086833	NonProperStrand	2	chr6	115757997	115758044	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-12.8899
chr9	30750449	30750539	protein_coding	Adamts8	exon	ENSMUSG00000031994	ProperStrand	3	chr18	84731372	84731452	protein_coding	Zfp407	exon	ENSMUSG00000048410	ProperStrand	34	1	-20.9333
chr10	80641608	80641896	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr7	91258331	91258347	protein_coding	Fam108c	utr3	ENSMUSG00000038459	NonProperStrand	65	28	-19.9794
chr19	9952817	9952834	protein_coding	Incenp	exon	ENSMUSG00000024660	ProperStrand	111	chr2	166890502	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-6.3379
chr13	74592627	74592657	LINE	Lx6	L1	chr13Lx674592171	NonProperStrand	3	chr16	23110455	23110530	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-14.4518
chr10	43382490	43382506	SINE	B4	B4	chr10B443382431	ProperStrand	4	chr1	33870618	33870650	protein_coding	Zfp451	exon	ENSMUSG00000042197	ProperStrand	17	1	-24.9237
chr14	79880925	79880942	protein_coding	Wbp4	utr5	ENSMUSG00000022023	ProperStrand	9	chr11	62416992	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-9.8982
chr7	38747677	38747695	protein_coding	C80913	exon	ENSMUSG00000030421	NonProperStrand	5	chr4	131908356	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-10.1894
chr1	95325978	95326006	protein_coding	Hdlbp	exon	ENSMUSG00000034088	ProperStrand	97	chr18	35716765	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-2.6895
chr15	60661082	60661099	lincRNA	9930014A18Rik	exon	ENSMUSG00000044513	ProperStrand	54	chr11	115281770	115281786	protein_coding	Kctd2	exon	ENSMUSG00000016940	NonProperStrand	5	1	-18.5689
chr8	13177163	13177183	protein_coding	Grtp1	intron	ENSMUSG00000038515	ProperStrand	10	chr16	23110913	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-13.9486
chrX	103382572	103387363	protein_coding	Pgk1	utr5	ENSMUSG00000062070	ProperStrand	484	chr11	62416580	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-1.4794
chr15	73476073	73476130	protein_coding	Slc45a4	utr5	ENSMUSG00000079020	ProperStrand	127	chr1	162968215	162968294	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	3	-12.4602
chr12	87846829	87846864	protein_coding	Esrrb	exon	ENSMUSG00000021255	ProperStrand	254	chr1	88247741	88247800	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-2.4413
chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	chr2	31536036	31536087	protein_coding	Exosc2	exon	ENSMUSG00000039356	ProperStrand	39	1	-9.9320
chr14	55261121	55261188	protein_coding	Acin1	utr3	ENSMUSG00000022185	ProperStrand	67	chr1	74863309	74863398	tRNA	tRNA1392-GlyGCC	.	1291017	ProperStrand	10	1	-16.7136
chr6	113685122	113686375	protein_coding	Sec13	exon	ENSMUSG00000030298	ProperStrand	6	chr4	131908410	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-5.6461
chr11	14961829	14961849	LINE	Lx	L1	chr11Lx14961726	ProperStrand	93	chr18	33954816	33954890	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-2.7191
chr11	59597684	59597741	protein_coding-noncoding	Pld6	utr3	ENSMUSG00000043648	ProperStrand	2	chr5	145937060	145938163	protein_coding	Cpsf4	exon	ENSMUSG00000029625	ProperStrand	15	1	-inf
chr2	72011246	72011264	protein_coding	Rapgef4	intron	ENSMUSG00000049044	ProperStrand	5	chr9	120037898	120037967	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-9.7957
chr11	117006189	117008438	protein_coding	Sec14l1	exon	ENSMUSG00000020823	ProperStrand	71	chr1	162965532	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.9733
chr4	135263496	135263550	protein_coding	Il28ra	utr3	ENSMUSG00000062157	ProperStrand	10	chr11	98878344	98878408	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	2	-15.8033
chr3	96218421	96218521	misc_RNA	Telomerase-vert	.	ENSMUSG00000064796	ProperStrand	443	chr9	83678800	83681879	protein_coding	Elovl4	exon	ENSMUSG00000032262	ProperStrand	159	1	-7.3653
chr4	43943351	43943367	protein_coding	Reck	intron	ENSMUSG00000028476	NonProperStrand	36	chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	1	-13.5975
chr11	4350882	4350962	LINE	L1M4c	L1	chr11L1M4c4350902	ProperStrand	1	chr11	4350664	4350754	LTR	MTEa	MaLR	chr11MTEa4350569	NonProperStrand	1	1	-inf
chr15	76541224	76541240	protein_coding	Lrrc14	utr5	ENSMUSG00000033728	ProperStrand	52	chr2	37255621	37255661	snoRNA	ENSMUSG00000077756_Snord90	.	ENSMUSG00000077756	ProperStrand	167	1	-11.5478
chr9	106092651	106092741	protein_coding	Wdr82	utr3	ENSMUSG00000020257	ProperStrand	34	chrX	34622910	34622990	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-4.2283
chr17	35299513	35299642	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	chr1	162968465	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	5	-0.8837
chr7	19737850	19737895	protein_coding	Snrpd2	exon	ENSMUSG00000040824	ProperStrand	23	chr11	69483136	69483203	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.1990
chr1	174051908	174052008	protein_coding	Copa	utr3	ENSMUSG00000026553	ProperStrand	33	chrX	70245431	70246358	protein_coding	Zfp185	exon	ENSMUSG00000031351	ProperStrand	13	1	-17.4551
chr17	23961745	23961807	protein_coding	Tceb2	utr3	ENSMUSG00000055839	ProperStrand	12	chr16	23111473	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.0123
chr6	100179101	100179143	protein_coding	Rybp	utr3	ENSMUSG00000072872	ProperStrand	51	chr3	123210854	123210954	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.3354
chr18	38050558	38050654	protein_coding	Diap1	exon	ENSMUSG00000024456	ProperStrand	77	chr7	118219574	118219619	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-3.7028
chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	chr17	35384163	35384195	snoRNA	ENSMUSG00000065273_SNORD83	.	ENSMUSG00000065273	ProperStrand	244	1	-2.6111
chr3	108237083	108238835	protein_coding	Sars	exon	ENSMUSG00000068739	ProperStrand	45	chr11	62416575	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-5.7289
chr3	18761204	18761294	LINE	L1_Mur2	L1	chr3L1_Mur218761104	NonProperStrand	1	chr3	18761032	18761112	LINE	Lx	L1	chr3Lx18760935	NonProperStrand	1	1	-inf
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr17	83877918	83877997	protein_coding	Eml4	utr3	ENSMUSG00000032624	ProperStrand	50	3	-15.3075
chr7	108971290	108971306	protein_coding	Inppl1	utr3	ENSMUSG00000032737	ProperStrand	272	chr11	6428089	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-0.8531
chr19	41992259	41993019	protein_coding	Pgam1	utr3	ENSMUSG00000011752	ProperStrand	124	chr10	110918636	110918693	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-3.8955
chr1	182518265	182518553	protein_coding	Parp1	exon	ENSMUSG00000026496	ProperStrand	227	chr15	79908938	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-2.9725
chr4	56910496	56910618	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	chr15	5068440	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	4	-2.0817
chr19	27837820	27837836	protein_coding	Rfx3	utr3	ENSMUSG00000040929	ProperStrand	92	chr2	131005373	131005491	protein_coding	Cenpb	exon	ENSMUSG00000068267	ProperStrand	26	1	-14.1466
chr1	75384884	75384975	protein_coding	Speg	exon	ENSMUSG00000026207	ProperStrand	42	chr11	69481369	69481432	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.8588
chr7	26472435	26472451	protein_coding	Tgfb1	utr5	ENSMUSG00000002603	NonProperStrand	154	chr7	105271013	105271035	protein_coding	Capn5	utr3	ENSMUSG00000035547	ProperStrand	99	1	-10.4156
chr18	80909380	80909396	protein_coding	Nfatc1	exon	ENSMUSG00000033016	ProperStrand	35	chr4	131865871	131865918	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.6607
chr9	71326504	71326571	protein_coding	Polr2m	utr3	ENSMUSG00000032199	ProperStrand	83	chr17	24343586	24343602	protein_coding	Ntn3	exon	ENSMUSG00000079662	ProperStrand	237	1	-9.9070
chr9	63868722	63868739	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	chr8	73419560	73419828	protein_coding	Rpl18a	exon	ENSMUSG00000045128	ProperStrand	394	1	-4.8807
chr17	6232006	6232022	protein_coding	Tulp4	exon	ENSMUSG00000034377	NonProperStrand	265	chr14	76247711	76247749	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-1.5984
chr5	33133356	33133405	protein_coding	C330019G07Rik	utr3	ENSMUSG00000054280	ProperStrand	22	chr19	8963027	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.0882
chr11	61241371	61241388	LTR	MT2A	ERVL	chr11MT2A61241243	NonProperStrand	3	chr7	28421172	28421284	protein_coding	Akt2	exon	ENSMUSG00000004056	ProperStrand	100	1	-19.3445
chr7	30074412	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr2	26493366	26493466	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	6	-9.4664
chr2	130101987	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	chr4	41150097	41150140	snoRNA	ENSMUSG00000089265_SNORD121A	.	ENSMUSG00000089265	ProperStrand	370	1	-2.0420
chr14	49792862	49792952	protein_coding	Naa30	exon	ENSMUSG00000036282	ProperStrand	13	chr10	23505172	23505252	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.8218
chr2	143764421	143767902	protein_coding	Dstn	exon	ENSMUSG00000015932	ProperStrand	22	chr19	8798761	8798793	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-6.7808
chr4	40131985	40133377	protein_coding	Aco1	exon	ENSMUSG00000028405	ProperStrand	25	chr17	13112564	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	2	-10.2432
chr7	149077968	149078058	protein_coding	Tollip	exon	ENSMUSG00000025139	ProperStrand	19	chr11	69483136	69483190	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-11.0731
chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr5	81758898	81758915	protein_coding	Lphn3	exon	ENSMUSG00000037605	ProperStrand	19	1	-8.7651
chr8	108350987	108351087	protein_coding	Ranbp10	exon	ENSMUSG00000037415	ProperStrand	13	chr10	80641696	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	4	-21.8509
chr19	5666668	5666684	protein_coding	Pcnxl3	exon	ENSMUSG00000054874	ProperStrand	96	chr18	35716831	35716878	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.4405
chr5	145016972	145017054	protein_coding	Bri3	intron	ENSMUSG00000047843	ProperStrand	16	chr16	23111375	23111465	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.4608
chr11	118305719	118305735	protein_coding	C1qtnf1	intron	ENSMUSG00000017446	ProperStrand	52	chr12	110874223	110874247	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	1	-10.2657
chr2	32070092	32070147	protein_coding	Prrc2b	exon	ENSMUSG00000039262	ProperStrand	344	chr2	79843543	79843563	protein_coding	Pde1a	intron	ENSMUSG00000059173	NonProperStrand	275	1	-6.7817
chr9	44435783	44436753	protein_coding	Ddx6	exon	ENSMUSG00000032097	ProperStrand	59	chr9	120039538	120039618	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	6	-17.5454
chr11	75307655	75307717	protein_coding	Prpf8	exon	ENSMUSG00000020850	ProperStrand	255	chr5	108336363	108336405	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	3	-6.0202
chr9	15116994	15117107	snoRNA	ENSMUSG00000077614_SNORA40	.	ENSMUSG00000077614	ProperStrand	54	chr16	23110838	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-3.7740
chr8	41513347	41513419	protein_coding	Zdhhc2	intron	ENSMUSG00000039470	ProperStrand	5	chr7	118219574	118219636	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-9.2324
chr1	116454949	116455039	LINE	L1Md_T	L1	chr1L1Md_T116453882	NonProperStrand	1	chr1	12658087	12658177	lincRNA	Gm17644	exon	ENSMUSG00000066918	ProperStrand	10	1	-inf
chr8	26928129	26929075	protein_coding	Ash2l	exon	ENSMUSG00000031575	ProperStrand	113	chr4	131865884	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-4.2928
chr9	20647989	20648030	LTR	ORR1E	MaLR	chr9ORR1E20647979	NonProperStrand	1	chr19	32464589	32464605	lincRNA	2700046G09Rik	exon	ENSMUSG00000024893	NonProperStrand	13	1	-inf
chr17	35299485	35299575	protein_coding	Prrc2a	intron	ENSMUSG00000024393	ProperStrand	315	chr17	35299568	35299648	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	3	-5.0845
chr19	4613251	4613340	protein_coding	Lrfn4	exon	ENSMUSG00000045045	ProperStrand	19	chr7	116664853	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	4	-15.0676
chr3	151780572	151780592	protein_coding	Gipc2	intron	ENSMUSG00000039131	NonProperStrand	4	chr1	89673618	89673718	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-8.7610
chr16	74518647	74518737	LTR	ORR1B1	MaLR	chr16ORR1B174518652	ProperStrand	1	chr16	74518505	74518585	SINE	B2_Mm2	B2	chr16B2_Mm274518472	NonProperStrand	1	1	-inf
chr19	5865240	5869483	protein_coding	Frmd8	exon	ENSMUSG00000024816	ProperStrand	7	chr18	35716811	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-6.2708
chr4	118296281	118296783	protein_coding	Ebna1bp2	exon	ENSMUSG00000028729	ProperStrand	18	chr16	23110911	23111001	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7867
chrX	71576538	71589907	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr16	23111374	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	8	-2.6095
chr2	30684125	30684142	protein_coding	Asb6	utr5	ENSMUSG00000039483	NonProperStrand	5	chr3	68889289	68889369	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-8.2464
chr3	104456724	104456814	protein_coding	Slc16a1	exon	ENSMUSG00000032902	ProperStrand	48	chr19	8800377	8800457	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-3.9457
chr17	36051675	36053262	protein_coding	Mrps18b	exon	ENSMUSG00000024436	ProperStrand	21	chr11	99885311	99885327	protein_coding	Krt33b	exon	ENSMUSG00000057723	NonProperStrand	352	9	-20.8202
chr5	128076288	128076304	protein_coding	Slc15a4	utr3	ENSMUSG00000029416	ProperStrand	49	chr19	8963027	8963082	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.6199
chr19	56671762	56671867	protein_coding	Nhlrc2	exon	ENSMUSG00000025078	ProperStrand	38	chr7	150717298	150717341	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	9	-inf
chr15	103182012	103182094	protein_coding	Itga5	exon	ENSMUSG00000000555	ProperStrand	28	chr11	97642988	97643078	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.8483
chr10	75322204	75322437	protein_coding	Mif	utr3	ENSMUSG00000033307	ProperStrand	146	chrX	34622940	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-1.6781
chr9	120038011	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	chr12	92811982	92812014	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	1	-0.8015
chr5	31360528	31361067	protein_coding	Cad	exon	ENSMUSG00000013629	ProperStrand	260	chr11	47505986	47506004	protein_coding	Sgcd	intron	ENSMUSG00000020354	ProperStrand	24	1	-12.2287
chr2	164251596	164251644	protein_coding	Sdc4	exon	ENSMUSG00000017009	ProperStrand	177	chr7	116664848	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-0.9280
chr4	43505788	43505878	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr12	81618869	81618890	snoRNA	ENSMUSG00000093141_AC163282.1	.	ENSMUSG00000093141	ProperStrand	39	1	-3.8628
chr1	82259692	82259782	protein_coding	Irs1	intron	ENSMUSG00000055980	ProperStrand	6	chr10	23505154	23505234	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-5.3874
chr3	88520802	88520819	protein_coding	Rit1	utr5	ENSMUSG00000028057	NonProperStrand	4	chr10	80642121	80642313	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-11.7426
chr2	37996803	38012970	protein_coding	Dennd1a	intron	ENSMUSG00000035392	NonProperStrand	128	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	2	-7.2882
chr7	149068575	149068665	protein_coding	Tollip	utr3	ENSMUSG00000025139	ProperStrand	19	chr7	116664817	116664897	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-7.8186
chr6	28376155	28376254	protein_coding	Arf5	utr3	ENSMUSG00000020440	ProperStrand	19	chr8	98269956	98269993	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	4	-inf
chr5	8405817	8408285	protein_coding	Dbf4	exon	ENSMUSG00000002297	ProperStrand	38	chr17	35087895	35087960	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-6.0969
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr9	15119287	15119397	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	2	-2.4575
chr5	134614687	134614703	protein_coding	Gatsl2	utr3	ENSMUSG00000015944	ProperStrand	8	chr4	122910959	122910975	protein_coding	Heyl	utr5	ENSMUSG00000032744	NonProperStrand	4	1	-19.5686
chr4	122968627	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	chr7	51505224	51505304	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	1	-1.5953
chr6	61805711	61805728	protein_coding	Fam190a	intron	ENSMUSG00000039578	NonProperStrand	24	chr14	56159295	56159312	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	1	-12.7951
chr8	124552133	124552149	protein_coding	Banp	utr3	ENSMUSG00000025316	NonProperStrand	34	chr4	131908693	131908753	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.0811
chr11	75114132	75114176	protein_coding	Rpa1	utr3	ENSMUSG00000000751	ProperStrand	37	chr1	162966001	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-4.5165
chr4	3762139	3762411	protein_coding	Rps20	exon	ENSMUSG00000028234	ProperStrand	71	chr17	13112458	13112538	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-4.2588
chr2	90235294	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr13	63612936	63612952	protein_coding	Ptch1	exon	ENSMUSG00000021466	NonProperStrand	118	3	-8.0676
chr16	30565531	30565581	protein_coding	Lsg1	exon	ENSMUSG00000022538	ProperStrand	25	chr11	69481364	69481427	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-8.0614
chr14	63225811	63225891	protein_coding	Fam124a	utr3	ENSMUSG00000035184	ProperStrand	14	chrX	80298639	80298729	protein_coding	Dmd	intron	ENSMUSG00000045103	NonProperStrand	23	1	-18.1755
chr7	16925067	16925117	protein_coding	Sae1	intron	ENSMUSG00000052833	ProperStrand	29	chr10	23505190	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	12	-inf
chr5	23825941	23825957	protein_coding	Kcnh2	exon	ENSMUSG00000038319	ProperStrand	242	chr5	90672696	90672739	protein_coding	Ankrd17	exon	ENSMUSG00000055204	ProperStrand	77	1	-10.0159
chr1	38493632	38493648	protein_coding	Aff3	intron	ENSMUSG00000037138	ProperStrand	20	chr11	106362639	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-9.6204
chr6	121591308	121591405	protein_coding	A2m	exon	ENSMUSG00000030111	ProperStrand	17	chr10	6063959	6063976	protein_coding	Akap12	intron	ENSMUSG00000038587	ProperStrand	1008	2	-16.1819
chr19	46452907	46453909	protein_coding	Actr1a	exon	ENSMUSG00000025228	ProperStrand	27	chr6	47975056	47975127	protein_coding	Zfp777	exon	ENSMUSG00000071477	ProperStrand	11	3	-19.6857
chrX	90827379	90827395	protein_coding	Pola1	exon	ENSMUSG00000006678	ProperStrand	83	chr4	122971925	122971986	protein_coding	Pabpc4	exon	ENSMUSG00000011257	ProperStrand	85	1	-11.9604
chr17	24857796	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	chr19	5038320	5038337	tRNA	tRNA711-SerGCT	.	1377041	ProperStrand	6	1	-6.7527
chr13	17896047	17896137	protein_coding	Cdk13	exon	ENSMUSG00000041297	ProperStrand	29	chr12	112779148	112779228	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-6.2016
chr5	63103445	63103462	protein_coding	Arap2	intron	ENSMUSG00000037999	ProperStrand	4	chr3	123210897	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-7.3786
chr16	91641623	91641882	protein_coding	Gart	exon	ENSMUSG00000022962	ProperStrand	200	chr7	51796648	51796670	protein_coding	Pold1	exon	ENSMUSG00000038644	ProperStrand	50	1	-11.2657
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr13	58229348	58229414	protein_coding	Hnrnpa0	exon	ENSMUSG00000007836	ProperStrand	110	2	-12.0193
chr4	118108622	118108642	protein_coding	Cdc20	exon	ENSMUSG00000006398	ProperStrand	43	chr5	108334243	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-5.4679
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr5	75473198	75473215	protein_coding	Gsx2	utr3	ENSMUSG00000035946	ProperStrand	307	1	-4.5961
chr2	90235315	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	134341340	134341357	protein_coding	Tbc1d10b	utr3	ENSMUSG00000042492	ProperStrand	187	1	-2.3991
chr2	70708007	70708024	SINE	B3A	B2	chr2B3A70707895	ProperStrand	15	chr1	88252846	88252901	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-9.4388
chr17	35302078	35302097	lincRNA	Gm17705	exon	ENSMUSG00000090936	ProperStrand	6	chr7	29136525	29136575	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-6.8330
chr4	48452585	48452675	protein_coding	Tex10	intron	ENSMUSG00000028345	NonProperStrand	2	chr8	107923861	107923951	protein_coding	Kctd19	intron	ENSMUSG00000051648	NonProperStrand	2	1	-inf
chr1	12997492	12997592	LINE	L1Md_F2	L1	chr1L1Md_F212997422	NonProperStrand	1	chr4	131908689	131908751	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-inf
mmu-miR-6240	3	23	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr11	102060738	102060754	protein_coding	Hdac5	exon	ENSMUSG00000008855	NonProperStrand	39	1	-6.7566
chr12	110889641	110889701	snoRNA	ENSMUSG00000064496_SNORD113	.	ENSMUSG00000064496	ProperStrand	37	chr12	110874223	110874276	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	1	-10.9526
chr13	6602080	6602374	protein_coding	Pfkp	exon	ENSMUSG00000021196	ProperStrand	197	chr4	131866155	131866245	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	5	-8.5863
chr19	5684451	5684562	protein_coding	Pcnxl3	exon	ENSMUSG00000054874	ProperStrand	96	chr11	6519810	6519847	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	2	-11.2693
chr5	116013317	116013419	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	chr18	35716685	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	6	-3.7289
chr11	67005924	67005940	protein_coding	Myh2	exon	ENSMUSG00000033196	ProperStrand	66	chr17	13112450	13112482	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-4.3976
chr14	15572351	15572370	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chrX	34622906	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-1.4961
chr2	90235319	90235338	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr14	65806213	65806229	LTR	MTD	MaLR	chr14MTD65806111	ProperStrand	8	1	-8.5166
chr18	34963550	34963650	protein_coding	Kdm3b	exon	ENSMUSG00000038773	ProperStrand	80	chr6	71832636	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	3	-11.8828
chr4	133669342	133672017	protein_coding	Ubxn11	exon	ENSMUSG00000012126	ProperStrand	8	chr4	41150098	41150125	snoRNA	ENSMUSG00000089265_SNORD121A	.	ENSMUSG00000089265	ProperStrand	370	2	-18.7752
chr15	80082150	80082240	protein_coding	Smcr7l	utr3	ENSMUSG00000022412	ProperStrand	19	chr15	98350173	98350253	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	2	-11.3781
chr3	8923561	8923578	protein_coding	Mrps28	intron	ENSMUSG00000040269	NonProperStrand	11	chr18	35714144	35714225	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-6.7643
chr13	64586818	64586898	LTR	MER74B	ERVL	chr13MER74B64586709	NonProperStrand	1	chr13	64586572	64586662	SINE	ID_B1	B4	chr13ID_B164586535	ProperStrand	1	1	-inf
chr2	164257636	164257652	protein_coding	Sdc4	intron	ENSMUSG00000017009	ProperStrand	177	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-3.1761
chr11	77632278	77667301	protein_coding	Myo18a	exon	ENSMUSG00000000631	ProperStrand	124	chr5	74489543	74489670	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	2	-4.3654
chrX	160347488	160347504	protein_coding	Ap1s2	intron	ENSMUSG00000031367	ProperStrand	52	chr2	32818886	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-5.7511
chr7	86771402	86771492	SINE	ID_B1	B4	chr7ID_B186771412	NonProperStrand	1	chr7	86251190	86251270	protein_coding	Acan	intron	ENSMUSG00000030607	NonProperStrand	4	1	-inf
chr2	142538310	142538370	protein_coding	Kif16b	exon	ENSMUSG00000038844	ProperStrand	10	chr11	72688518	72688534	protein_coding	Zzef1	exon	ENSMUSG00000055670	ProperStrand	48	1	-17.3132
chr18	35714263	35714293	lincRNA	Snhg4	intron	ENSMUSG00000090430	ProperStrand	270	chr2	26494708	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	6	-6.9937
chr15	78259253	78259269	protein_coding	Kctd17	exon	ENSMUSG00000033287	NonProperStrand	26	chr8	73419657	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.7022
chr12	60238570	60238718	protein_coding	Ctage5	exon	ENSMUSG00000021000	ProperStrand	35	chr1	64971417	64971484	protein_coding	Plekhm3	intron	ENSMUSG00000051344	ProperStrand	8	1	-17.9876
chr15	58577335	58577351	protein_coding	Fer1l6	intron	ENSMUSG00000037106	ProperStrand	54	chr17	6987017	6987087	protein_coding	Ezr	utr5	ENSMUSG00000052397	ProperStrand	126	1	-12.0358
chr5	42212753	42212805	protein_coding	Bod1l	exon	ENSMUSG00000061755	ProperStrand	43	chr16	23110834	23110873	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.3514
chr16	23111388	23111488	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	NonProperStrand	38	chr2	158182218	158182278	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	NonProperStrand	8	1	-18.0902
chr10	127523417	127526053	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr5	74489587	74489681	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	2	-0.8616
chr2	120996749	120996766	protein_coding	Tubgcp4	intron	ENSMUSG00000027263	ProperStrand	30	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-4.9227
chrX	148634295	148634311	protein_coding	Iqsec2	intron	ENSMUSG00000041115	NonProperStrand	10	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-6.7807
chr9	11307296	11307386	LINE	Lx7	L1	chr9Lx711306971	ProperStrand	1	chr9	11307591	11307671	LTR	ORR1B1-int	MaLR	chr9ORR1B1-int11307582	ProperStrand	1	1	-inf
chr18	16933117	16966848	protein_coding	Cdh2	exon	ENSMUSG00000024304	ProperStrand	71	chr17	39985144	39985203	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-5.6020
chr10	16844327	16844346	LINE	L1_Mur1	L1	chr10L1_Mur116843303	ProperStrand	76	chr16	23110828	23110902	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-0.9666
chr10	20080841	20080861	protein_coding	Fam54a	utr3	ENSMUSG00000019992	ProperStrand	232	chr16	23110454	23110529	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-2.1133
chr8	75869467	75869499	protein_coding	Large	intron	ENSMUSG00000004383	ProperStrand	48	chr16	90904495	90904511	protein_coding	4931408A02Rik	exon	ENSMUSG00000039903	ProperStrand	14	1	-16.7470
chr18	34436302	34458133	protein_coding	Apc	exon	ENSMUSG00000005871	ProperStrand	64	chr7	116663649	116663761	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	5	-11.3331
chr17	32258355	32258399	protein_coding	Notch3	utr3	ENSMUSG00000038146	ProperStrand	181	chr7	118219574	118219602	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-2.1962
chr3	95057729	95057766	protein_coding	Prune	utr3	ENSMUSG00000015711	ProperStrand	21	chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	1	-11.9591
chr11	117583821	117583957	protein_coding	Tnrc6c	exon	ENSMUSG00000025571	ProperStrand	51	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-8.9191
chr6	40331280	40336842	protein_coding	Agk	exon	ENSMUSG00000029916	ProperStrand	6	chr12	106269323	106269403	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-8.7970
chr14	51436667	51436753	protein_coding	Parp2	exon	ENSMUSG00000036023	ProperStrand	50	chr4	137212294	137212310	protein_coding	Usp48	utr3	ENSMUSG00000043411	ProperStrand	135	1	-12.0532
chr6	120432385	120432401	protein_coding	Il17ra	exon	ENSMUSG00000002897	ProperStrand	61	chr16	23111448	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.2363
chr12	88790981	88790998	protein_coding	Snw1	utr3	ENSMUSG00000021039	ProperStrand	36	chr4	131908350	131908417	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.2156
chr13	9833548	9833627	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr14	78099022	78107414	protein_coding	Enox1	exon	ENSMUSG00000022012	ProperStrand	16	1	-7.5851
chr14	93057754	93057844	LINE	L1Md_T	L1	chr14L1Md_T93057762	NonProperStrand	1	chr14	93057638	93057728	LINE	L1_Mur3	L1	chr14L1_Mur393056608	NonProperStrand	1	1	-inf
chr7	120434983	120435023	protein_coding	Arntl	exon	ENSMUSG00000055116	ProperStrand	14	chr11	69483136	69483188	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-8.5983
chr10	104675185	104675210	protein_coding	Tmtc2	intron	ENSMUSG00000036019	NonProperStrand	14	chr16	23109053	23109090	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-10.2305
chr1	138070638	138070654	protein_coding	Kif21b	exon	ENSMUSG00000041642	ProperStrand	77	chr17	35089224	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-5.0002
chr6	25638699	25638715	protein_coding	Gpr37	exon	ENSMUSG00000039904	ProperStrand	49	chr18	73693109	73693139	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-5.9216
chr5	145532346	145532379	protein_coding	Trrap	intron	ENSMUSG00000045482	ProperStrand	399	chr11	101466279	101466352	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	1	-5.1317
chr10	27892625	27892644	protein_coding	Ptprk	intron	ENSMUSG00000019889	NonProperStrand	24	chr11	100339333	100339381	protein_coding	Acly	exon	ENSMUSG00000020917	ProperStrand	183	1	-12.9338
chr7	116663646	116663759	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	chr9	95524993	95525035	snoRNA	ENSMUSG00000065346_SNORA4	.	ENSMUSG00000065346	ProperStrand	142	3	-3.6344
chr6	3794656	3794673	SINE	B4A	B4	chr6B4A3794525	NonProperStrand	26	chr11	62416575	62416640	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-6.8193
chr12	110918187	110918221	snoRNA	ENSMUSG00000065749_AF357428	.	ENSMUSG00000065749	ProperStrand	218	chr11	69481434	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-2.1984
chr7	150755962	150756052	protein_coding	Cars	exon	ENSMUSG00000010755	ProperStrand	62	chr18	35716685	35716765	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.1157
chr11	69266813	69266830	protein_coding	Dnahc2	exon	ENSMUSG00000005237	ProperStrand	95	chr2	70401918	70401934	protein_coding	Gad1	exon	ENSMUSG00000070880	NonProperStrand	15	1	-15.2074
chr7	52974663	52974942	protein_coding	Rpl18	exon	ENSMUSG00000059070	ProperStrand	116	chr5	130300420	130300500	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.4601
chr13	9833549	9833686	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr2	26493364	26493499	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	34	-10.6209
chr17	45706240	45706326	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr7	86244450	86244468	protein_coding	Acan	exon	ENSMUSG00000030607	ProperStrand	38	1	-7.6412
chr5	3914635	3914725	LINE	Lx2B	L1	chr5Lx2B3914030	ProperStrand	1	chr13	26121580	26121660	SINE	B4A	B4	chr13B4A26121497	NonProperStrand	1	1	-inf
chr9	20699313	20699355	protein_coding	Eif3g	exon	ENSMUSG00000070319	ProperStrand	38	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.1665
chr6	67231777	67233958	protein_coding	Serbp1	utr3	ENSMUSG00000036371	ProperStrand	261	chr7	121184538	121184554	protein_coding	Spon1	utr3	ENSMUSG00000038156	ProperStrand	6	1	-15.1218
chr10	74524205	74524221	protein_coding	Bcr	exon	ENSMUSG00000009681	NonProperStrand	23	chr2	166412123	166412139	protein_coding	Prex1	exon	ENSMUSG00000039621	ProperStrand	20	1	-17.2329
chr16	37777389	37777408	protein_coding	Fstl1	exon	ENSMUSG00000022816	ProperStrand	179	chr7	150717298	150717368	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	2	-5.8395
chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	chr8	46036418	46036474	protein_coding	Fat1	exon	ENSMUSG00000070047	ProperStrand	306	1	-5.9552
chr4	55431687	55431705	lincRNA	Gm12505	exon	ENSMUSG00000087070	ProperStrand	447	chr19	8989196	8989479	protein_coding	Ganab	exon	ENSMUSG00000071650	ProperStrand	145	2	-12.0529
chr4	131865855	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr12	110925027	110925066	snoRNA	ENSMUSG00000064726_SNORD113	.	ENSMUSG00000064726	ProperStrand	42	1	-2.3470
chr11	121569212	121569228	protein_coding	Metrnl	exon	ENSMUSG00000039208	NonProperStrand	11	chr10	23505152	23505219	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.1476
chr7	133611180	133611239	protein_coding	Sh2b1	utr3	ENSMUSG00000030733	ProperStrand	17	chr5	108336365	108336455	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-7.3855
chr4	99323699	99323809	protein_coding	Foxd3	exon	ENSMUSG00000067261	NonProperStrand	4	chr1	173041632	173041649	tRNA	tRNA710-ValCAC	.	565505	ProperStrand	206	3	-20.4166
chr2	89368462	89368479	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	chr5	115939468	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	8	-19.7585
chr15	100482838	100482898	protein_coding	Bin2	exon	ENSMUSG00000075411	ProperStrand	12	chr7	116664795	116664905	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	5	-21.2829
chrX	155815454	155815481	protein_coding	Eif1ax	exon	ENSMUSG00000067194	ProperStrand	18	chr7	116664792	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	7	-19.5223
chr2	80297373	80297389	LINE	L1MB8	L1	chr2L1MB880297262	ProperStrand	53	chr4	45003492	45003550	protein_coding	Grhpr	utr3	ENSMUSG00000035637	ProperStrand	35	1	-14.6572
chr13	60862003	60862021	protein_coding	Dapk1	exon	ENSMUSG00000021559	NonProperStrand	40	chr7	123342047	123342064	protein_coding	Plekha7	intron	ENSMUSG00000045659	ProperStrand	66	1	-13.9426
chr10	89083651	89083667	protein_coding	Slc17a8	utr5	ENSMUSG00000019935	NonProperStrand	13	chr7	30074411	30074430	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-13.5464
chr6	38461893	38461909	protein_coding	Ubn2	utr3	ENSMUSG00000038538	ProperStrand	86	chr9	15118323	15118377	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-2.8189
chr14	65647787	65647861	protein_coding	Ints9	exon	ENSMUSG00000021975	ProperStrand	10	chr2	91436248	91436338	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-11.1505
chr14	13022704	13022720	protein_coding	Ptprg	intron	ENSMUSG00000021745	ProperStrand	72	chr1	162965531	162965550	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.9484
chr12	111899268	111899358	protein_coding-noncoding	Dync1h1	utr5	ENSMUSG00000018707	NonProperStrand	1	chr12	111899378	111899468	protein_coding	Dync1h1	exon	ENSMUSG00000018707	NonProperStrand	7	1	-inf
chr9	14397578	14397594	protein_coding	Amotl1	exon	ENSMUSG00000013076	ProperStrand	72	chr4	48630113	48630163	protein_coding	Tmeff1	exon	ENSMUSG00000028347	ProperStrand	47	1	-13.4433
chr9	114313823	114313869	protein_coding	Glb1	exon	ENSMUSG00000045594	ProperStrand	67	chr5	74489582	74489672	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-3.5733
chr5	139710508	139710689	protein_coding	Sun1	exon	ENSMUSG00000036817	ProperStrand	108	chr12	105582410	105582426	protein_coding	Serpina3k	exon	ENSMUSG00000058207	ProperStrand	14	1	-15.1122
chr9	59518315	59521726	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr2	158182156	158182241	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	6	-4.0246
chr17	39979941	39980012	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr16	97832671	97832687	protein_coding	Tmprss2	utr5	ENSMUSG00000000385	ProperStrand	5	1	-12.3744
chr6	115758033	115758122	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr18	75161108	75161150	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	5	-8.5343
chr2	157119950	157120991	protein_coding	Rpn2	exon	ENSMUSG00000027642	ProperStrand	363	chr10	90432659	90432678	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	1	-7.0283
chr8	98269962	98270062	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	chr1	39605591	39605633	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	2	-1.2848
chr2	18599428	18599450	protein_coding	Bmi1	utr5	ENSMUSG00000026739	NonProperStrand	4	chr6	115758042	115758074	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-11.0996
chr3	116126898	116126914	protein_coding	Cdc14a	utr5	ENSMUSG00000033502	ProperStrand	29	chr1	162968443	162968475	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-7.5275
chr7	113571187	113571204	protein_coding	Gm4759	intron	ENSMUSG00000053541	ProperStrand	1	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr9	31199560	31199597	protein_coding	Nfrkb	exon	ENSMUSG00000042185	ProperStrand	34	chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	1	-12.5800
chr8	83224923	83225013	protein_coding	Smarca5	utr3	ENSMUSG00000031715	ProperStrand	115	chr2	32817351	32817640	protein_coding	Rpl12	exon	ENSMUSG00000038900	ProperStrand	167	1	-9.9532
chr7	3297137	3297197	protein_coding	Myadm	exon	ENSMUSG00000068566	ProperStrand	31	chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	3	-16.2307
chr9	120039933	120039996	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	chr8	98269959	98270013	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	3	-5.6490
chr10	78041851	78042209	protein_coding	Ilvbl	exon	ENSMUSG00000032763	ProperStrand	8	chr11	97642952	97643060	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-10.4718
chr3	90292990	90293039	protein_coding	Snapin	utr3	ENSMUSG00000001018	ProperStrand	2	chr5	122691914	122691930	protein_coding	Hvcn1	utr3	ENSMUSG00000064267	ProperStrand	182	1	-18.6728
chr13	101551187	101551277	protein_coding	Ccnb1	exon	ENSMUSG00000041431	ProperStrand	39	chr17	24857764	24857844	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.0467
chr3	121160233	121160307	protein_coding	Cnn3	exon	ENSMUSG00000053931	ProperStrand	77	chr18	35714163	35714263	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-2.9916
chr3	84203324	84203382	Simple_repeat	(TG)n	Simple_repeat	chr3(TG)n84203329	ProperStrand	5	chr11	97643005	97643037	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	5	-inf
chr2	92253297	92253428	protein_coding	Cry2	exon	ENSMUSG00000068742	ProperStrand	10	chr11	6428060	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-6.6888
chr1	138741291	138741354	protein_coding	Nr5a2	utr3	ENSMUSG00000026398	ProperStrand	43	chr19	8800373	8800463	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	4	-13.4639
chrX	7520670	7520770	protein_coding-noncoding	Hdac6	utr3	ENSMUSG00000031161	ProperStrand	1	chr5	130300515	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-inf
chr18	32054205	32054253	protein_coding	Wdr33	intron	ENSMUSG00000024400	ProperStrand	48	chr7	134671446	134671517	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	3	-18.3336
chr15	36526327	36528978	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr16	23111695	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	12	-1.4293
chr11	53464065	53464107	protein_coding	Rad50	exon	ENSMUSG00000020380	ProperStrand	61	chr7	148634747	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-6.6571
chr11	50114521	50115324	protein_coding	Canx	exon	ENSMUSG00000020368	ProperStrand	296	chr17	35087895	35087946	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-2.2746
chr8	26133247	26133327	protein_coding	Tm2d2	utr3	ENSMUSG00000031556	ProperStrand	7	chr6	71832550	71832640	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	2	-15.9959
chr10	42109253	42109318	protein_coding	Lace1	intron	ENSMUSG00000038302	ProperStrand	12	chr16	23110913	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.4686
chr8	87620877	87621324	protein_coding	Man2b1	exon	ENSMUSG00000005142	ProperStrand	27	chr16	23110965	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.1875
chr8	119114224	119114242	protein_coding	Cdyl2	intron	ENSMUSG00000031758	NonProperStrand	9	chr1	166186913	166186949	protein_coding	Slc19a2	exon	ENSMUSG00000040918	ProperStrand	22	1	-19.2845
chr8	113447068	113447168	snoRNA	ENSMUSG00000065100_SNORA57	.	ENSMUSG00000065100	ProperStrand	81	chr18	35716812	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.6926
chr5	119199721	119199771	protein_coding	Med13l	exon	ENSMUSG00000018076	ProperStrand	226	chr1	38238410	38238429	protein_coding	Aff3	intron	ENSMUSG00000037138	NonProperStrand	11	1	-14.1214
chrX	34622958	34623036	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	chr13	21292136	21292179	tRNA	tRNA65-LeuCAA	.	63604	ProperStrand	57	10	-19.3895
chr3	125618066	125618083	protein_coding	Ugt8a	exon	ENSMUSG00000032854	ProperStrand	16	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-6.1593
chr14	51460950	51460966	protein_coding	Tep1	exon	ENSMUSG00000006281	ProperStrand	37	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-10.3433
chr17	74789674	74789764	protein_coding	Spast	utr3	ENSMUSG00000024068	ProperStrand	13	chr17	24857717	24857797	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-5.1456
chr1	169166780	169166823	protein_coding	Uck2	exon	ENSMUSG00000026558	ProperStrand	45	chr9	120039585	120039675	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.8509
chr4	131908231	131908253	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr11	82620420	82620481	protein_coding	Rffl	intron	ENSMUSG00000020696	NonProperStrand	6	2	-18.7024
chr14	21426330	21426399	protein_coding	Usp54	exon	ENSMUSG00000034235	ProperStrand	20	chr1	194571820	194571853	snRNA	ENSMUSG00000064881_U5	.	ENSMUSG00000064881	ProperStrand	187	1	-13.2647
chr4	33333283	33333328	protein_coding	Pnrc1	exon	ENSMUSG00000040128	ProperStrand	27	chr2	26494710	26494759	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.6040
chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	chr18	82662186	82662202	protein_coding	Mbp	intron	ENSMUSG00000041607	NonProperStrand	185	1	-8.3652
chr5	140247304	140247345	protein_coding	Ints1	exon	ENSMUSG00000029547	ProperStrand	45	chr1	91029527	91029568	protein_coding	Sh3bp4	intron	ENSMUSG00000036206	ProperStrand	20	3	-19.8224
chr11	50115371	50117904	protein_coding	Canx	exon	ENSMUSG00000020368	NonProperStrand	6	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	ProperStrand	10	1	-19.0093
chr11	120819091	120819181	protein_coding	Slc16a3	intron	ENSMUSG00000025161	ProperStrand	98	chr9	120037900	120037980	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-3.7771
chr9	34978825	34983360	protein_coding	Dcps	exon	ENSMUSG00000032040	ProperStrand	38	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.5179
chr9	108646603	108647816	protein_coding	Prkar2a	exon	ENSMUSG00000032601	ProperStrand	43	chr17	35299513	35299643	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-5.4247
chr9	54768317	54768333	protein_coding	Agphd1	exon	ENSMUSG00000035878	NonProperStrand	19	chr17	24857759	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.3961
chr4	131908384	131908464	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr10	110222620	110222710	protein_coding	E2f7	utr3	ENSMUSG00000020185	ProperStrand	30	1	-8.6501
chr13	55234303	55234319	protein_coding	Zfp346	utr3	ENSMUSG00000021481	ProperStrand	22	chr10	5989333	5989392	protein_coding	Akap12	utr3	ENSMUSG00000038587	ProperStrand	1008	1	-9.6989
chr13	6590174	6621323	protein_coding	Pfkp	intron	ENSMUSG00000021196	ProperStrand	197	chr16	23110830	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	11	-2.1721
chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	chr1	20552541	20552558	protein_coding	Pkhd1	exon	ENSMUSG00000043760	NonProperStrand	49	1	-10.4825
chr2	32818804	32818884	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	chr13	96100602	96100692	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	1	-0.9713
chr6	56782244	56782309	protein_coding	Fkbp9	exon	ENSMUSG00000029781	ProperStrand	39	chr15	34370578	34370668	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-4.3595
chr1	53219102	53219119	protein_coding	1700019A02Rik	intron	ENSMUSG00000060715	ProperStrand	23	chr17	35088957	35089021	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-7.7812
chr11	42440243	42440259	protein_coding	Gabrb2	exon	ENSMUSG00000007653	ProperStrand	248	chr4	140681578	140681608	protein_coding	D4Ertd22e	intron	ENSMUSG00000040842	ProperStrand	23	1	-12.4091
chr17	27767432	27767448	protein_coding	Rps10	exon	ENSMUSG00000052146	ProperStrand	94	chr5	121655017	121655106	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-5.0739
chr1	162965534	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr4	132394334	132394450	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	2	-0.8072
chr7	36388906	36389233	protein_coding	Ankrd27	exon	ENSMUSG00000034867	ProperStrand	132	chr2	26493442	26493497	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-2.3400
chr15	82012441	82012503	protein_coding	Srebf2	exon	ENSMUSG00000022463	ProperStrand	592	chr14	76247753	76247843	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	5	-4.4436
chr1	97230773	97230793	protein_coding	Fam174a	utr3	ENSMUSG00000051185	NonProperStrand	10	chr7	29136525	29136599	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-13.7280
chr7	35431254	35431271	protein_coding	Kctd15	intron	ENSMUSG00000030499	NonProperStrand	9	chr7	29136525	29136608	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.9747
chr10	60915150	60915250	protein_coding	Eif4ebp2	exon	ENSMUSG00000020091	ProperStrand	39	chr2	166890802	166890858	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	1	-11.2500
chr5	36835751	36837744	protein_coding	Tbc1d14	exon	ENSMUSG00000029192	ProperStrand	25	chr18	35716830	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.7263
chr7	54442302	54442406	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	chr5	130295498	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-2.0008
chr13	108549784	108549801	protein_coding	Zswim6	intron	ENSMUSG00000032846	NonProperStrand	19	chr3	94167315	94167331	protein_coding	C2cd4d	utr5	ENSMUSG00000091648	ProperStrand	30	1	-17.0594
chr1	127689138	127689161	protein_coding	Gpr39	intron	ENSMUSG00000026343	ProperStrand	7	chr11	77995189	77995235	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	3	-25.7307
chr17	35800446	35801056	protein_coding	Vars2	exon	ENSMUSG00000038838	ProperStrand	19	chr11	69481352	69481432	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.3947
chr3	153575089	153575110	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	chr5	121655016	121655097	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	4	-2.0735
chr2	30820237	30820332	protein_coding	Tor1a	intron	ENSMUSG00000026849	ProperStrand	8	chr8	32260335	32260370	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	7	-19.1265
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr7	150717298	150717345	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-0.8300
chr9	108400520	108400562	protein_coding	Usp19	exon	ENSMUSG00000006676	ProperStrand	57	chr15	79913288	79913329	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-3.6873
chr6	83930686	83930745	protein_coding	Zfml	intron	ENSMUSG00000030016	ProperStrand	45	chr1	16093725	16093760	protein_coding	Rpl7	exon	ENSMUSG00000043716	ProperStrand	93	1	-13.0128
chr15	60661082	60661098	lincRNA	9930014A18Rik	exon	ENSMUSG00000044513	ProperStrand	54	chr2	65605270	65605287	protein_coding	Scn2a1	utr3	ENSMUSG00000075318	NonProperStrand	11	1	-16.9453
chr11	97699636	97699736	protein_coding	Lasp1	utr3	ENSMUSG00000038366	ProperStrand	65	chr4	131908747	131908785	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.1169
chr11	78118032	78118079	protein_coding	Spag5	exon	ENSMUSG00000002055	ProperStrand	49	chr11	68886928	68887018	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	8	-inf
chr4	138952512	138952548	protein_coding	Ubr4	exon	ENSMUSG00000066036	ProperStrand	304	chr19	8798775	8798813	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	2	-3.4401
chrX	98637135	98637153	protein_coding	Nono	exon	ENSMUSG00000031311	ProperStrand	102	chr19	8963086	8963201	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.4449
chr11	72796309	72797007	protein_coding	Atp2a3	exon	ENSMUSG00000020788	ProperStrand	29	chr19	8798520	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-6.6466
chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	chr17	39985568	39985623	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-2.6732
chr11	116535955	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr9	70243746	70246583	protein_coding	Myo1e	exon	ENSMUSG00000032220	ProperStrand	36	1	-6.9235
chr5	125763169	125763269	protein_coding	Scarb1	intron	ENSMUSG00000037936	ProperStrand	18	chr10	23505151	23505218	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.2069
chr1	13165236	13165254	protein_coding	Ncoa2	exon	ENSMUSG00000005886	ProperStrand	26	chr9	120039540	120039626	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-4.9026
chr6	124863916	124863987	protein_coding	Ptms	utr3	ENSMUSG00000030122	ProperStrand	21	chr4	131865966	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.5891
chr12	104662237	104662269	protein_coding	Ddx24	exon	ENSMUSG00000041645	ProperStrand	34	chr7	19720897	19720914	protein_coding	Fbxo46	exon	ENSMUSG00000050428	NonProperStrand	24	1	-16.2518
chr11	48615250	48615307	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	chr4	131865464	131865517	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-1.0959
chr5	143731669	143731705	protein_coding	Fscn1	exon	ENSMUSG00000029581	ProperStrand	200	chr8	127203389	127203405	protein_coding	Ttc13	intron	ENSMUSG00000037300	NonProperStrand	10	1	-14.5596
chrX	97700568	97700591	protein_coding	Igbp1	exon	ENSMUSG00000031221	ProperStrand	33	chr9	120039605	120039679	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	5	-17.7563
chr19	55998429	55998445	protein_coding	Tcf7l2	utr3	ENSMUSG00000024985	ProperStrand	103	chr11	97643022	97643079	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.6024
chr17	85135445	85135497	protein_coding	Lrpprc	intron	ENSMUSG00000024120	ProperStrand	98	chrX	84483699	84483741	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-7.2710
chr2	127041833	127041923	protein_coding	Snrnp200	exon	ENSMUSG00000003660	ProperStrand	203	chr10	110918549	110918629	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-1.4182
chr2	22444717	22444812	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	chr9	15119338	15119397	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	3	-2.1671
chr19	12004385	12004401	protein_coding	Patl1	exon	ENSMUSG00000046139	ProperStrand	49	chr5	108336363	108336408	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-5.2741
chr9	50579620	50579675	protein_coding	Fdxacb1	exon	ENSMUSG00000037845	ProperStrand	2	chr10	39978273	39978363	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-12.8756
chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr2	144091716	144091816	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	ProperStrand	549	1	-2.3170
chr19	3586456	3591031	protein_coding	Lrp5	exon	ENSMUSG00000024913	ProperStrand	145	chr4	131865867	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	6	-6.0512
chr17	57024385	57024565	protein_coding	1700061G19Rik	exon	ENSMUSG00000024209	ProperStrand	5	chr9	120039637	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-8.3145
chr6	52678635	52678709	protein_coding	Tax1bp1	intron	ENSMUSG00000004535	ProperStrand	20	chr16	23110828	23110893	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.6223
chr19	5295082	5295281	protein_coding	Sf3b2	exon	ENSMUSG00000024853	ProperStrand	102	chr19	47348389	47348406	protein_coding	Sh3pxd2a	intron	ENSMUSG00000053617	ProperStrand	57	1	-12.3501
chr9	120860896	120868927	protein_coding	Ctnnb1	exon	ENSMUSG00000006932	ProperStrand	214	chr12	112779177	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	9	-20.0565
chr14	51446603	51446641	protein_coding	Tep1	intron	ENSMUSG00000006281	ProperStrand	37	chr4	86232352	86232430	snoRNA	ENSMUSG00000088958_Scarna8	.	ENSMUSG00000088958	ProperStrand	366	2	-16.7798
chr7	13511759	13511926	protein_coding	Rps5	exon	ENSMUSG00000012848	ProperStrand	108	chr14	76247735	76247815	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-3.0872
chr9	75473767	75473783	protein_coding	Lysmd2	exon	ENSMUSG00000032184	NonProperStrand	20	chr9	120039625	120039657	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-5.4196
chr16	18337783	18337802	protein_coding	D16H22S680E	intron	ENSMUSG00000013539	NonProperStrand	15	chr17	35089181	35089233	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-8.2628
chrX	71045246	71045330	protein_coding	Pdzd4	exon	ENSMUSG00000002006	ProperStrand	20	chr17	13112561	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	3	-15.4606
chr1	60015231	60015256	protein_coding	Fam117b	exon	ENSMUSG00000041040	ProperStrand	31	chr12	60141412	60141481	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-8.1507
chr4	44376519	44376581	protein_coding	Melk	intron	ENSMUSG00000035683	ProperStrand	58	chrX	34622935	34623025	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	6	-17.3380
chr9	21602970	21602986	protein_coding	Kank2	utr5	ENSMUSG00000032194	ProperStrand	196	chr5	108336363	108336412	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-2.6930
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr12	56404814	56404830	protein_coding	1110008L16Rik	utr5	ENSMUSG00000021023	NonProperStrand	10	1	-16.7907
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr3	84995363	84995380	protein_coding	Arfip1	intron	ENSMUSG00000074513	NonProperStrand	56	1	-10.5670
chr18	12929919	12946842	protein_coding	Osbpl1a	exon	ENSMUSG00000044252	ProperStrand	39	chr10	23505152	23505206	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-5.2767
chr1	134098284	134098384	protein_coding	Lemd1	intron	ENSMUSG00000079330	ProperStrand	3	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr1	162965533	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr1	145626057	145626154	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	3	-1.1269
chr19	56796961	56796978	protein_coding	Adrb1	exon	ENSMUSG00000035283	NonProperStrand	8	chr1	72871502	72895671	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	1	-13.6196
chr7	128101894	128101984	protein_coding	Cdr2	exon	ENSMUSG00000030878	ProperStrand	21	chr11	98878388	98878468	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-8.3891
chr7	89029994	89030058	protein_coding	Hdgfrp3	utr3	ENSMUSG00000025104	ProperStrand	4	chr11	6428073	6428163	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-14.3166
chr15	20083400	20083418	LINE	Lx	L1	chr15Lx20083212	NonProperStrand	14	chr9	120038614	120038674	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.8314
chr11	51002691	51002781	SINE	PB1D7	Alu	chr11PB1D751002691	NonProperStrand	2	chr4	131908372	131908452	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-inf
chr17	57162115	57162215	protein_coding	Khsrp	exon	ENSMUSG00000007670	ProperStrand	353	chr19	12543943	12543977	protein_coding	Dtx4	utr3	ENSMUSG00000039982	ProperStrand	4	1	-15.4589
chr7	134634130	134634179	protein_coding	Fbrs	utr3	ENSMUSG00000042423	ProperStrand	7	chr8	112363255	112363275	snoRNA	ENSMUSG00000077549_Snord71	.	ENSMUSG00000077549	ProperStrand	196	1	-15.3805
chr1	31006553	31006580	protein_coding	Ptp4a1	utr5	ENSMUSG00000026064	ProperStrand	26	chr3	128921646	128921662	protein_coding	Pitx2	exon	ENSMUSG00000028023	NonProperStrand	6	1	-19.1279
chr4	43505840	43505930	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr2	166932243	166932290	protein_coding	Kcnb1	intron	ENSMUSG00000050556	NonProperStrand	6	1	-7.6381
chr14	56406769	56406785	protein_coding	Ripk3	exon	ENSMUSG00000022221	NonProperStrand	12	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-11.0125
chr2	29963160	29963250	protein_coding-noncoding	Zer1	utr3	ENSMUSG00000039686	NonProperStrand	1	chr2	29963058	29963138	protein_coding	Zer1	exon	ENSMUSG00000039686	NonProperStrand	2	1	-inf
chr17	23953035	23953061	protein_coding	Srrm2	exon	ENSMUSG00000039218	ProperStrand	521	chr10	23505559	23505624	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-3.3793
chr1	93266761	93266851	protein_coding	Fam132b	exon	ENSMUSG00000047443	ProperStrand	3	chr19	8800377	8800457	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-9.7434
chr14	31953025	31953118	protein_coding	Stab1	exon	ENSMUSG00000042286	NonProperStrand	127	chr5	115939533	115939615	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-6.3776
chr6	108336781	108337373	protein_coding	Itpr1	exon	ENSMUSG00000030102	ProperStrand	94	chr7	117190044	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	19	-20.0557
chr12	111931289	111931526	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr16	44159682	44159738	protein_coding	Naa50	exon	ENSMUSG00000022698	ProperStrand	56	3	-18.3302
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	110544350	110544366	protein_coding	Nbeal2	exon	ENSMUSG00000056724	ProperStrand	161	1	-2.6546
chr12	56499949	56508526	protein_coding	Psma6	exon	ENSMUSG00000021024	ProperStrand	13	chr2	145076805	145209253	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-10.8298
chr17	57144163	57144214	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	ProperStrand	29	chr16	23110876	23110943	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-5.1035
chr5	110846987	110847087	protein_coding	Fbrsl1	intron	ENSMUSG00000043323	ProperStrand	131	chr19	8798760	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-3.3349
chr13	58509302	58509322	protein_coding	Rmi1	exon	ENSMUSG00000035367	ProperStrand	23	chr16	23110910	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-4.3078
chr1	72166839	72166855	SINE	B4A	B4	chr1B4A72166632	ProperStrand	19	chr8	129468856	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-6.6760
chr5	30453149	30453169	protein_coding	Hadha	exon	ENSMUSG00000025745	ProperStrand	35	chr9	59516397	59516444	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	3	-18.2978
chr2	179933274	179933311	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr11	68886971	68887030	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-1.1285
chr8	109259644	109269579	protein_coding	Tmco7	intron	ENSMUSG00000041949	ProperStrand	30	chr7	116664843	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-6.4490
chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	chr10	5991238	5991301	protein_coding	Akap12	exon	ENSMUSG00000038587	ProperStrand	1008	1	-4.2121
chr9	45666992	45667082	protein_coding	Bace1	exon	ENSMUSG00000032086	ProperStrand	12	chr3	123210861	123210941	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.0354
chr5	31478711	31478791	protein_coding	Gtf3c2	intron	ENSMUSG00000029144	ProperStrand	22	chr7	134671430	134671520	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-9.8963
chr11	120133648	120133748	protein_coding	Bahcc1	exon	ENSMUSG00000039741	ProperStrand	118	chr19	8963025	8963081	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.2405
chr11	30741608	30742076	protein_coding	Psme4	exon	ENSMUSG00000040850	ProperStrand	40	chr7	142464244	142464260	protein_coding	Nps	utr3	ENSMUSG00000073804	NonProperStrand	10	1	-17.8218
chr11	97034552	97034584	protein_coding	Kpnb1	exon	ENSMUSG00000001440	ProperStrand	197	chr1	162965532	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-2.5207
chr15	66281112	66285636	protein_coding	Lrrc6	exon	ENSMUSG00000022375	ProperStrand	3	chr11	62418013	62418089	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-11.8803
chr2	26493413	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr6	71832551	71832581	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	3	-0.9445
chr10	98478151	98478173	protein_coding	Atp2b1	exon	ENSMUSG00000019943	ProperStrand	31	chr2	126472468	126472484	protein_coding	Gabpb1	exon	ENSMUSG00000027361	ProperStrand	54	2	-inf
chr9	55053981	55053997	protein_coding	Ube2q2	utr3	ENSMUSG00000032307	ProperStrand	17	chr17	24857718	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	6	-19.3496
chr10	79755227	79755534	protein_coding	Rps15	exon	ENSMUSG00000063457	ProperStrand	119	chr3	123210856	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.0616
chr7	26479352	26481987	protein_coding	Tgfb1	exon	ENSMUSG00000002603	ProperStrand	17	chr10	122702078	122702094	protein_coding	Fam19a2	utr5	ENSMUSG00000044071	NonProperStrand	52	1	-16.1614
chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	chr14	76245152	76245200	protein_coding	Tpt1	utr5	ENSMUSG00000060126	ProperStrand	236	1	-7.5410
chr18	42919484	42919507	protein_coding	Ppp2r2b	intron	ENSMUSG00000024500	ProperStrand	25	chr4	131865392	131865445	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-5.6979
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr7	80629439	80629455	protein_coding	Chd2	exon	ENSMUSG00000078671	ProperStrand	69	1	-7.5164
chr11	20627160	20627199	protein_coding	Aftph	exon	ENSMUSG00000049659	ProperStrand	9	chr2	26494752	26494842	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-11.1522
chr19	47808227	47808260	protein_coding	Sfr1	exon	ENSMUSG00000025066	ProperStrand	15	chr4	131908689	131908799	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-12.2279
chr12	68768739	68768829	LINE	L1Md_F2	L1	chr12L1Md_F268768613	ProperStrand	13	chr16	13633553	13633633	protein_coding	Parn	intron	ENSMUSG00000022685	NonProperStrand	4	1	-20.8300
chr14	67670753	67670815	protein_coding	Ppp2r2a	intron	ENSMUSG00000022052	ProperStrand	45	chr8	129468768	129468858	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	2	-8.2063
chr12	100059095	100059175	protein_coding	Eml5	intron	ENSMUSG00000051166	ProperStrand	26	chr17	46821522	46821625	protein_coding	Ppp2r5d	exon	ENSMUSG00000059409	ProperStrand	97	1	-14.0425
chr1	16350470	16350526	protein_coding	Stau2	intron	ENSMUSG00000025920	ProperStrand	7	chr4	131908689	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.0493
chr14	49212218	49212234	SINE	ID4	ID	chr14ID449212212	ProperStrand	4	chr5	38622534	38624503	protein_coding	Lyar	exon	ENSMUSG00000067367	ProperStrand	33	1	-19.0852
chr5	117583637	117583653	protein_coding	Taok3	utr5	ENSMUSG00000061288	NonProperStrand	13	chr8	129468851	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-7.4499
chr14	20598201	20598865	protein_coding	Nid2	exon	ENSMUSG00000021806	ProperStrand	372	chr1	102076756	102076790	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	1	-5.8162
chr13	9833553	9833652	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr2	25258688	25258727	protein_coding	Npdc1	utr5	ENSMUSG00000015094	ProperStrand	5	1	-10.0546
chr5	149860461	149861381	protein_coding	Hmgb1	exon	ENSMUSG00000066551	ProperStrand	99	chr16	23111741	23111786	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	9	-15.3037
chr11	48620969	48621069	protein_coding	Trim41	exon	ENSMUSG00000040365	ProperStrand	11	chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	1	-12.2249
chr10	39615988	39616025	LTR	MTC-int	MaLR	chr10MTC-int39615621	ProperStrand	7	chr11	77996560	77996623	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	6	-19.0584
chr5	144488841	144488908	protein_coding	Usp42	utr5	ENSMUSG00000051306	ProperStrand	17	chr4	131865396	131865496	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-6.4708
chr10	80105831	80105931	protein_coding	Btbd2	utr3	ENSMUSG00000003344	ProperStrand	68	chr1	162968460	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-5.8329
chr16	36041596	36041612	protein_coding	Wdr5b	utr5	ENSMUSG00000034379	ProperStrand	4	chr10	80642167	80642311	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-11.7426
chr6	72386471	72386513	protein_coding	Mat2a	exon	ENSMUSG00000053907	ProperStrand	51	chr2	26768409	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-5.9208
chr19	8898956	8899005	protein_coding	Hnrnpul2	exon	ENSMUSG00000071659	ProperStrand	93	chr5	108336378	108336468	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-4.0453
chr8	126527401	126527491	protein_coding	Taf5l	exon	ENSMUSG00000038697	ProperStrand	23	chr13	64254283	64254300	protein_coding	Zfp367	utr5	ENSMUSG00000044934	NonProperStrand	6	1	-18.5851
chr2	90235294	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr15	58046238	58046254	lincRNA	Gm15943	intron	ENSMUSG00000086801	ProperStrand	5	2	-15.4562
chr15	103072901	103073128	protein_coding	Hnrnpa1	exon	ENSMUSG00000046434	ProperStrand	68	chr4	131908802	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.0584
chr8	96605852	96605870	protein_coding	Bbs2	intron	ENSMUSG00000031755	ProperStrand	4	chr16	23111447	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-10.7545
chr5	111121096	111121196	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	NonProperStrand	8	chr7	116664793	116664868	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	NonProperStrand	12	2	-19.9701
chr4	128899871	128899931	protein_coding	C77080	exon	ENSMUSG00000050390	ProperStrand	48	chr15	98350146	98350200	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-5.1928
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr7	117189863	117189943	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	4	-6.6049
chr13	54786532	54786627	protein_coding	Rnf44	intron	ENSMUSG00000034928	ProperStrand	90	chr1	162967514	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	4	-9.6704
chr13	8107308	8107324	LTR	MLT2B4	ERVL	chr13MLT2B48107269	ProperStrand	1	chr17	24857776	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-inf
chr9	69306890	69306940	protein_coding	Anxa2	intron	ENSMUSG00000032231	ProperStrand	43	chr16	23110828	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.3514
chr14	15572351	15572371	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr7	116664822	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	4	-4.6694
chr8	91554518	91554564	protein_coding	Sall1	exon	ENSMUSG00000031665	ProperStrand	96	chr17	35299528	35299560	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-3.8848
chr15	7142703	7142724	protein_coding	Lifr	utr3	ENSMUSG00000054263	ProperStrand	64	chr12	17552949	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	2	-8.1914
chr10	104807046	105010997	protein_coding	Tmtc2	intron	ENSMUSG00000036019	ProperStrand	72	chr19	8963026	8963175	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	8	-17.8619
chr11	97084307	97084344	protein_coding	Npepps	exon	ENSMUSG00000001441	ProperStrand	30	chr12	56700673	56700695	protein_coding	Insm2	exon	ENSMUSG00000045440	NonProperStrand	22	1	-16.7695
chr18	34963438	34963482	protein_coding	Kdm3b	exon	ENSMUSG00000038773	ProperStrand	80	chr18	82773672	82773688	protein_coding	Zfp236	exon	ENSMUSG00000041258	NonProperStrand	117	1	-11.3938
chr9	63042015	63042031	protein_coding	Map2k5	exon	ENSMUSG00000058444	ProperStrand	193	chr7	29136554	29136610	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-0.7063
chr16	23113178	23113217	protein_coding	Eif4a2	utr3	ENSMUSG00000022884	NonProperStrand	3	chr7	116663650	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	NonProperStrand	51	1	-inf
chr4	135606296	135607117	protein_coding	Rpl11	exon	ENSMUSG00000059291	ProperStrand	152	chr18	35716763	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-0.8407
chr18	20760729	20760819	protein_coding	Dsg2	exon	ENSMUSG00000044393	ProperStrand	60	chr9	120037909	120037989	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-4.7058
chr1	36852174	36852215	protein_coding	Tmem131	exon	ENSMUSG00000026116	ProperStrand	129	chr10	127521228	127521270	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	2	-11.6584
chr5	29317812	29317829	LINE	Lx7	L1	chr5Lx729317715	ProperStrand	19	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-9.5222
chr2	45169093	45169109	LINE	Lx7	L1	chr2Lx745168968	NonProperStrand	4	chr19	42199431	42199448	protein_coding	Avpi1	exon	ENSMUSG00000018821	NonProperStrand	9	1	-19.8837
chr15	36535632	36535654	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr1	176553053	176553070	protein_coding	Fmn2	intron	ENSMUSG00000028354	NonProperStrand	3	1	-14.2536
chr6	30452440	30452502	protein_coding	Tmem209	intron	ENSMUSG00000029782	ProperStrand	36	chr15	79913288	79913346	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.5578
chr5	143666201	143666245	protein_coding	Actb	exon	ENSMUSG00000029580	ProperStrand	446	chrX	143918863	143918953	snoRNA	ENSMUSG00000084421_SNORA35	.	ENSMUSG00000084421	ProperStrand	293	3	-14.0714
chr11	68936978	68936997	protein_coding	Hes7	utr3	ENSMUSG00000023781	NonProperStrand	66	chr11	69483136	69483237	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	5	-10.9508
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr2	84530865	84531297	protein_coding	Zdhhc5	exon	ENSMUSG00000034075	NonProperStrand	144	1	-6.8504
chr2	145712320	145712337	protein_coding	Rin2	utr3	ENSMUSG00000001768	NonProperStrand	4	chr3	90029905	90029921	protein_coding	Rab13	utr3	ENSMUSG00000027935	NonProperStrand	18	1	-19.3636
chr2	91757743	91757833	protein_coding	Ambra1	exon	ENSMUSG00000040506	ProperStrand	65	chr12	106269408	106269488	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-3.9894
chr9	120842168	120842187	protein_coding	Ctnnb1	intron	ENSMUSG00000006932	ProperStrand	214	chr16	73013215	73013315	protein_coding	Robo1	exon	ENSMUSG00000022883	NonProperStrand	188	1	-8.4767
chr13	9833553	9833669	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr7	108440949	108440967	protein_coding	Atg16l2	intron	ENSMUSG00000047767	ProperStrand	121	2	-6.1423
chr5	114294461	114295253	protein_coding	Coro1c	exon	ENSMUSG00000004530	ProperStrand	44	chr16	23111761	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.4139
chr3	136526736	136526753	protein_coding	Ppp3ca	intron	ENSMUSG00000028161	NonProperStrand	120	chr3	36847171	36847244	protein_coding	4932438A13Rik	exon	ENSMUSG00000037270	ProperStrand	96	1	-10.9769
chr9	119835050	119835093	protein_coding	Wdr48	utr3	ENSMUSG00000032512	ProperStrand	16	chr10	110918642	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-6.0058
chr15	16593777	16593866	LTR	MTA_Mm-int	MaLR	chr15MTA_Mm-int16593598	ProperStrand	1	chr2	177565061	177565140	LTR	MTA_Mm-int	MaLR	chr2MTA_Mm-int177564044	ProperStrand	1	1	-inf
chr16	87409631	87410571	protein_coding	Ltn1	exon	ENSMUSG00000052299	ProperStrand	49	chr14	76247751	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-4.5582
chr10	56135170	56135260	SINE	B1F2	Alu	chr10B1F256135117	NonProperStrand	1	chr10	56135000	56135080	SINE	ID_B1	B4	chr10ID_B156134845	NonProperStrand	1	1	-inf
chr2	129998643	129998715	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr7	87243045	87243062	protein_coding	Idh2	exon	ENSMUSG00000030541	ProperStrand	21	1	-10.2302
chr3	134151041	134151057	lincRNA	Gm16742	intron	ENSMUSG00000084777	NonProperStrand	42	chr7	29136525	29136575	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.9861
chr15	81542464	81542497	protein_coding	Rangap1	exon	ENSMUSG00000022391	ProperStrand	69	chr17	24857716	24857806	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-3.7255
chr19	37671673	37671694	protein_coding	Exoc6	exon	ENSMUSG00000053799	ProperStrand	9	chr14	33005095	33005138	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-7.7725
chr19	47385400	47385490	protein_coding	Sh3pxd2a	intron	ENSMUSG00000053617	ProperStrand	57	chrX	34622932	34623012	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-3.2640
chr11	106010874	106010892	protein_coding	Map3k3	exon	ENSMUSG00000020700	ProperStrand	36	chr8	88062178	88062223	protein_coding	Dnaja2	utr3	ENSMUSG00000031701	ProperStrand	39	1	-15.2029
chr11	5344505	5344521	protein_coding	Znrf3	exon	ENSMUSG00000041961	ProperStrand	63	chr15	79908929	79908956	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	2	-8.8176
chr10	107800757	107800858	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	chr10	90581059	90581218	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	14	-21.7030
chr11	77319950	77320024	protein_coding	Git1	exon	ENSMUSG00000011877	ProperStrand	95	chr7	116664794	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	6	-11.5393
chr10	4522889	4522905	protein_coding	Mtrf1l	exon	ENSMUSG00000019774	NonProperStrand	3	chr6	56783214	56783247	protein_coding	Fkbp9	intron	ENSMUSG00000029781	NonProperStrand	6	1	-inf
chr6	113428901	113428989	protein_coding	Il17rc	exon	ENSMUSG00000030281	ProperStrand	2	chr19	8963027	8963166	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-9.4105
chr3	144817605	144817621	LINE	Lx9	L1	chr3Lx9144817450	ProperStrand	30	chr1	162965531	162965554	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.5795
chr14	79238758	79238848	LINE	Lx3_Mus	L1	chr14Lx3_Mus79238127	NonProperStrand	1	chr18	48572799	48572889	LINE	Lx3_Mus	L1	chr18Lx3_Mus48572607	NonProperStrand	1	1	-inf
chr8	24168974	24231407	protein_coding	Ank1	utr5	ENSMUSG00000031543	ProperStrand	47	chr16	23110828	23110940	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.1909
chr17	53826602	53826676	protein_coding	Sgol1	intron	ENSMUSG00000023940	ProperStrand	17	chr14	31827477	31827543	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-9.4894
chr11	102294587	102294611	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr11	69481333	69481388	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	3	-1.1081
mmu-miR-295-3p	0	17	miRNA	mmu-miR-295-3p	.	mmu-miR-295-3p	ProperStrand	19	chr6	125294180	125294196	protein_coding	Scnn1a	utr3	ENSMUSG00000030340	ProperStrand	10	1	-18.8818
chr7	29600327	29600344	protein_coding	Hnrnpl	exon	ENSMUSG00000015165	ProperStrand	150	chr1	162966009	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-2.0066
chr2	31924012	31924877	protein_coding	Fam78a	utr3	ENSMUSG00000050592	NonProperStrand	340	chr18	35716683	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-0.8789
chr13	6338816	6338837	SINE	RSINE1	B4	chr13RSINE16338808	ProperStrand	4	chr3	123210874	123210974	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-18.3087
chr4	133404011	133404438	protein_coding	Rps6ka1	exon	ENSMUSG00000003644	ProperStrand	68	chr15	79908929	79909019	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-5.2287
chr10	89282305	89282322	protein_coding	Uhrf1bp1l	utr3	ENSMUSG00000019951	NonProperStrand	55	chr19	53715378	53715588	protein_coding	Smc3	exon	ENSMUSG00000024974	ProperStrand	61	1	-13.4532
chr16	45119543	45119563	protein_coding	Ccdc80	intron	ENSMUSG00000022665	ProperStrand	15	chr4	131908359	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.7937
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr8	89408874	89408890	protein_coding	N4bp1	utr5	ENSMUSG00000031652	ProperStrand	98	1	-12.1670
chr16	4886395	4886411	protein_coding	Mgrn1	exon	ENSMUSG00000022517	NonProperStrand	157	chr5	124252393	124253005	protein_coding	Kntc1	exon	ENSMUSG00000029414	ProperStrand	27	1	-12.9994
chr8	119984994	119985094	protein_coding	4933407C03Rik	utr3	ENSMUSG00000034390	ProperStrand	48	chr11	77995180	77995197	protein_coding	Rpl23a	intron	ENSMUSG00000058546	ProperStrand	121	1	-12.3539
chr1	115129385	115129465	LINE	L1VL4	L1	chr1L1VL4115128887	ProperStrand	1	chr1	115129518	115129608	LINE	Lx2A	L1	chr1Lx2A115129453	ProperStrand	1	1	-inf
chr1	52707366	52707444	protein_coding	Tmem194b	utr3	ENSMUSG00000043015	ProperStrand	4	chr7	29136541	29136631	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-7.7378
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr14	31953025	31953118	protein_coding	Stab1	exon	ENSMUSG00000042286	NonProperStrand	127	1	-7.0989
chr4	123170494	123171189	protein_coding	Macf1	exon	ENSMUSG00000028649	ProperStrand	320	chr5	145532202	145532248	protein_coding	Trrap	intron	ENSMUSG00000045482	ProperStrand	399	1	-6.1922
chr3	96218414	96218514	misc_RNA	Telomerase-vert	.	ENSMUSG00000064796	ProperStrand	443	chr2	124298859	124298878	protein_coding	Sema6d	intron	ENSMUSG00000027200	NonProperStrand	18	1	-11.7518
chr5	145650657	145652259	protein_coding	Smurf1	exon	ENSMUSG00000038780	ProperStrand	45	chr2	26494722	26494802	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.6333
chr17	34118308	34118398	LTR	IAPLTR2_Mm	ERVK	chr17IAPLTR2_Mm34118213	NonProperStrand	1	chr17	34063893	34063973	protein_coding	Tapbp	intron	ENSMUSG00000024308	ProperStrand	14	1	-inf
chr5	120130895	120132648	protein_coding	Tbx3	exon	ENSMUSG00000018604	ProperStrand	87	chr11	97642952	97643043	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-3.3954
chr9	102809257	102809311	protein_coding	Ryk	utr3	ENSMUSG00000032547	ProperStrand	25	chr11	97642995	97643085	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	4	-13.3666
chr19	8799829	8799897	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	chr7	52381973	52382010	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	3	-0.8046
chr3	32238103	32238140	protein_coding	Zmat3	utr3	ENSMUSG00000027663	ProperStrand	62	chr10	120709244	120712786	protein_coding	Tbc1d30	exon	ENSMUSG00000052302	ProperStrand	233	1	-10.5271
chr1	36869524	36872360	protein_coding	Tmem131	exon	ENSMUSG00000026116	ProperStrand	129	chr16	23110456	23110536	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.2706
chr11	68886948	68887038	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	chr2	18508668	18508712	tRNA	tRNA1947-AsnGTT	.	776353	ProperStrand	179	1	-2.1912
chr11	105144168	105144268	protein_coding	Tlk2	utr3	ENSMUSG00000020694	ProperStrand	19	chr4	116826698	116826722	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-9.0964
chr7	17580768	17580861	protein_coding	Ccdc8	exon	ENSMUSG00000041117	ProperStrand	7	chr5	121655103	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	4	-inf
chr7	149170854	149171339	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	chr19	8799836	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-3.0240
chr6	122272374	122272440	protein_coding	Phc1	exon	ENSMUSG00000040669	ProperStrand	158	chr16	23110546	23110578	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	7	-9.8914
chr16	48294162	48294215	protein_coding	Dppa4	utr3	ENSMUSG00000058550	ProperStrand	13	chr19	9004433	9005295	protein_coding	Eml3	exon	ENSMUSG00000071647	ProperStrand	19	1	-18.8581
chr3	116104225	116104315	protein_coding-noncoding	Cdc14a	utr3	ENSMUSG00000033502	ProperStrand	2	chr4	41568833	41568913	protein_coding	Dnaic1	intron	ENSMUSG00000061322	NonProperStrand	2	1	-inf
chr1	162965531	162965587	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr13	90238620	90238720	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	8	-5.2955
chr10	127750558	127750616	protein_coding	Pan2	intron	ENSMUSG00000005682	ProperStrand	53	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-7.2299
chr1	89105750	89105766	protein_coding	Chrng	exon	ENSMUSG00000026253	NonProperStrand	130	chr13	23853918	23853976	protein_coding	Hist1h3a	exon	ENSMUSG00000069265	ProperStrand	12	1	-15.0318
chrX	12675700	12677565	protein_coding	Usp9x	exon	ENSMUSG00000031010	ProperStrand	174	chr11	69481334	69481446	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	3	-4.2415
chr17	25996060	25996076	protein_coding	Wdr90	exon	ENSMUSG00000073434	ProperStrand	91	chr19	6061284	6061329	protein_coding	Znhit2-ps	exon	ENSMUSG00000075227	ProperStrand	1	1	-inf
chr8	83352375	83352392	protein_coding	Gab1	intron	ENSMUSG00000031714	NonProperStrand	8	chr10	90581143	90581175	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-8.8764
chr13	23622208	23622230	lincRNA	Gm11335	intron	ENSMUSG00000085016	ProperStrand	20	chr9	15119287	15119397	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	5	-20.8171
chr12	102183702	102183767	protein_coding	Ccdc88c	exon	ENSMUSG00000021182	ProperStrand	151	chr9	63089218	63089235	protein_coding	Map2k5	intron	ENSMUSG00000058444	NonProperStrand	79	1	-10.9080
chr13	63612936	63612952	protein_coding	Ptch1	exon	ENSMUSG00000021466	NonProperStrand	118	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-9.4064
chr13	67609893	67609916	protein_coding	Zfp58	intron	ENSMUSG00000071291	NonProperStrand	3	chr18	33954820	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	3	-inf
chr7	108347075	108347093	protein_coding	Fchsd2	exon	ENSMUSG00000030691	NonProperStrand	28	chr11	6428088	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-7.7062
chr19	6123861	6123878	protein_coding	Snx15	exon	ENSMUSG00000024787	ProperStrand	7	chr18	35714229	35714280	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-7.7147
chr9	65127126	65127142	protein_coding	Cilp	exon	ENSMUSG00000042254	ProperStrand	212	chr1	172975115	172975189	tRNA	tRNA699-GlyGCC	.	1811121	ProperStrand	660	1	-6.0138
chr4	107973053	107973069	protein_coding	Zyg11b	intron	ENSMUSG00000034636	NonProperStrand	17	chr4	116827794	116827833	snoRNA	ENSMUSG00000064751_SNORD46	.	ENSMUSG00000064751	ProperStrand	132	1	-14.2922
chr9	102778085	102778141	protein_coding	Ryk	exon	ENSMUSG00000032547	ProperStrand	25	chr16	18240836	18240926	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	1	-10.8945
chr10	110393360	110393377	protein_coding	Zdhhc17	exon	ENSMUSG00000035798	ProperStrand	11	chr19	8799581	8799635	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-10.2114
chr5	145904736	145904823	protein_coding	Bud31	intron	ENSMUSG00000038722	ProperStrand	12	chr11	68886994	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-7.3320
chr15	79659195	79659213	protein_coding	Npcd	exon	ENSMUSG00000089837	NonProperStrand	6	chr9	65044377	65044454	snRNA	ENSMUSG00000075763_U5	.	ENSMUSG00000075763	ProperStrand	216	1	-15.4991
chr9	107302575	107302598	protein_coding	Cacna2d2	exon	ENSMUSG00000010066	ProperStrand	7	chr17	27259648	27259699	protein_coding	2900010M23Rik	utr3	ENSMUSG00000024208	ProperStrand	13	1	-20.5261
chr5	130018921	130047255	protein_coding	Sfswap	exon	ENSMUSG00000029439	ProperStrand	34	chr16	23111373	23111474	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	6	-13.2126
chrX	7752870	7752886	protein_coding	Tbc1d25	exon	ENSMUSG00000039201	ProperStrand	126	chr1	102076755	102076790	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	1	-7.9520
chr16	5256015	5256031	protein_coding	Fam86	utr5	ENSMUSG00000022544	ProperStrand	231	chr17	95160908	95218241	protein_coding	2610044O15Rik	exon	ENSMUSG00000066057	NonProperStrand	70	1	-10.3003
chr13	55665930	55671144	protein_coding	Fam193b	utr5	ENSMUSG00000021495	ProperStrand	51	chr11	69481337	69481417	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.4975
chr2	144087332	144087397	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	chr12	60235126	60235180	snoRNA	ENSMUSG00000077505_SNORA26	.	ENSMUSG00000077505	ProperStrand	82	1	-5.9296
chr4	151730301	151730737	protein_coding	Chd5	exon	ENSMUSG00000005045	NonProperStrand	147	chr8	122052883	122052930	protein_coding	Mbtps1	exon	ENSMUSG00000031835	ProperStrand	81	1	-10.9114
chr11	68067261	68067277	protein_coding	Ntn1	intron	ENSMUSG00000020902	NonProperStrand	194	chr5	121655100	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	3	-4.8802
chr9	67405022	67405041	protein_coding	Tln2	intron	ENSMUSG00000052698	NonProperStrand	5	chr8	73419666	73419785	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-8.1065
chr11	97889695	97889740	protein_coding	Rpl19	exon	ENSMUSG00000017404	ProperStrand	120	chr15	98350145	98350253	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	7	-20.0329
chr7	52162259	52162335	protein_coding	Ap2a1	exon	ENSMUSG00000060279	ProperStrand	193	chr8	73419675	73419765	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-2.3829
chr14	80262507	80262523	lincRNA	Gm6999	intron	ENSMUSG00000075495	ProperStrand	265	chr2	165106409	165106828	protein_coding	Slc35c2	exon	ENSMUSG00000017664	ProperStrand	39	1	-11.2041
chr9	64024499	64024567	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	chr13	23399497	23399552	tRNA	tRNA98-ValCAC	.	1497137	ProperStrand	17	1	-10.9210
chr10	4999647	4999663	protein_coding	Syne1	exon	ENSMUSG00000019769	ProperStrand	49	chr18	33954876	33954953	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-3.8820
chr2	103588240	103588355	protein_coding	Nat10	exon	ENSMUSG00000027185	NonProperStrand	64	chr7	106627797	106627819	protein_coding	Rps3	exon	ENSMUSG00000030744	ProperStrand	159	1	-11.2277
chr3	96218357	96218437	misc_RNA	Telomerase-vert	.	ENSMUSG00000064796	ProperStrand	443	chr14	76247752	76247842	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-0.9050
chr18	35716730	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	chr13	65259660	65259719	snoRNA	ENSMUSG00000089161_SNORA48	.	ENSMUSG00000089161	ProperStrand	28	1	-3.5142
chr4	43496492	43496508	protein_coding	Sit1	utr5	ENSMUSG00000028460	NonProperStrand	1	chr7	67123713	67123759	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	1	-inf
chr4	43505657	43505718	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr12	110887828	110887893	snoRNA	ENSMUSG00000084549_SNORD113	.	ENSMUSG00000084549	ProperStrand	196	1	-1.1771
chrX	45637972	45637989	lincRNA	9530027J09Rik	intron	ENSMUSG00000085283	ProperStrand	2	chr5	34112034	34112050	protein_coding	Letm1	exon	ENSMUSG00000005299	NonProperStrand	145	1	-19.0826
chr18	66142320	66142373	protein_coding	Lman1	utr3	ENSMUSG00000041891	ProperStrand	36	chr18	35714142	35714196	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.4028
chr9	78023109	78023162	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr2	119122747	119122814	protein_coding	Vps18	exon	ENSMUSG00000034216	ProperStrand	21	2	-12.7842
chr10	20080843	20080859	protein_coding	Fam54a	utr3	ENSMUSG00000019992	ProperStrand	232	chr7	29136537	29136599	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-1.1383
chr5	25355585	25355606	protein_coding	Actr3b	intron	ENSMUSG00000056367	ProperStrand	32	chr1	162965997	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-4.7971
chr8	44386062	44386142	protein_coding	Zfp42	intron	ENSMUSG00000051176	ProperStrand	127	chr19	8798772	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	4	-11.3590
chr5	136265560	136265959	protein_coding	Mdh2	exon	ENSMUSG00000019179	ProperStrand	50	chr4	131865913	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.0577
chr4	125390709	125390799	protein_coding	Grik3	utr3	ENSMUSG00000001985	ProperStrand	126	chr1	88248582	88248600	snoRNA	ENSMUSG00000064696_SNORD20	.	ENSMUSG00000064696	ProperStrand	89	2	-17.3559
chr16	96343986	96346351	protein_coding	Hmgn1	exon	ENSMUSG00000040681	ProperStrand	38	chr18	35716736	35716826	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-10.3472
chr7	108937154	108937170	protein_coding	Clpb	utr3	ENSMUSG00000001829	ProperStrand	44	chr19	8798490	8798550	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-9.4954
chr9	97011345	97011435	protein_coding	Slc25a36	utr5	ENSMUSG00000032449	ProperStrand	159	chr19	8800375	8800455	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-1.8511
chr17	13201051	13201117	protein_coding	Sod2	exon	ENSMUSG00000006818	ProperStrand	17	chr11	96721909	96721926	protein_coding	Copz2	intron	ENSMUSG00000018672	ProperStrand	11	1	-19.3848
chrX	163645245	163645321	protein_coding	Tmsb4x	utr3	ENSMUSG00000049775	ProperStrand	11	chr1	108766996	108767012	protein_coding	Serpinb5	exon	ENSMUSG00000067006	ProperStrand	2	1	-inf
chr15	27451466	27451556	protein_coding	Ank	intron	ENSMUSG00000022265	ProperStrand	37	chr2	44717046	44717126	protein_coding	Gtdc1	utr5	ENSMUSG00000036890	NonProperStrand	13	1	-17.3581
chr11	120207380	120207444	protein_coding	Actg1	utr3	ENSMUSG00000062825	ProperStrand	178	chr1	162968245	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	2	-7.7654
chr2	156099030	156099047	protein_coding	Phf20	intron	ENSMUSG00000038116	ProperStrand	60	chr1	162965531	162965588	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.2762
chr9	61761239	61761286	protein_coding	Rplp1	exon	ENSMUSG00000007892	ProperStrand	116	chr12	83763367	83763384	protein_coding	Rgs6	intron	ENSMUSG00000021219	NonProperStrand	65	2	-18.1527
chr4	43505656	43505718	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr1	20987420	20987475	protein_coding	Tram2	utr3	ENSMUSG00000041779	ProperStrand	13	1	-6.0161
chr18	86652679	86652696	protein_coding	Neto1	intron	ENSMUSG00000050321	NonProperStrand	8	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-7.2483
chr3	79401608	79401674	protein_coding	Ppid	exon	ENSMUSG00000027804	ProperStrand	7	chr5	73563222	73563238	protein_coding	Fryl	intron	ENSMUSG00000070733	ProperStrand	173	1	-15.6264
chr9	21823257	21823273	protein_coding	Elavl3	exon	ENSMUSG00000003410	NonProperStrand	137	chr6	124665437	124665523	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	1	-5.3116
chr6	61116039	61116129	LTR	ERVL-int	ERVL	chr6ERVL-int61115760	NonProperStrand	1	chr6	61116305	61116385	LTR	MTD	MaLR	chr6MTD61116296	ProperStrand	1	1	-inf
chr2	118616442	118616458	protein_coding	Disp2	exon	ENSMUSG00000040035	NonProperStrand	204	chr18	24170843	24170860	protein_coding	Zfp191	utr3	ENSMUSG00000051469	ProperStrand	3	1	-17.5057
chr8	13416895	13416912	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr7	4633484	4633501	protein_coding	Hspbp1	exon	ENSMUSG00000063802	ProperStrand	12	1	-9.7127
chr9	106183979	106183996	protein_coding	Poc1a	intron	ENSMUSG00000023345	ProperStrand	27	chr4	131908356	131908453	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.7097
chr14	76247753	76247838	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	chr11	69482352	69482374	snoRNA	ENSMUSG00000089542_snoU6-77	.	ENSMUSG00000089542	ProperStrand	138	1	-2.6556
chr7	31360891	31360928	protein_coding	Wbp7	exon	ENSMUSG00000006307	ProperStrand	180	chr7	116663712	116663768	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-2.9055
chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	chr5	116011359	116011387	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	1	-6.6875
chr19	47970971	47970987	protein_coding	Itprip	utr3	ENSMUSG00000079254	ProperStrand	75	chr16	23110454	23110508	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.0895
chr5	145893820	145896004	protein_coding	Pdap1	exon	ENSMUSG00000029623	ProperStrand	112	chr12	110918170	110918221	snoRNA	ENSMUSG00000065749_AF357428	.	ENSMUSG00000065749	ProperStrand	218	1	-9.4737
chr12	13250759	13251791	protein_coding	Ddx1	exon	ENSMUSG00000037149	ProperStrand	47	chr3	123210894	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.4742
chr1	63417737	63417827	LTR	MTA_Mm	MaLR	chr1MTA_Mm63417624	NonProperStrand	1	chr1	63417495	63417585	LTR	ORR1D1	MaLR	chr1ORR1D163417386	NonProperStrand	1	1	-inf
chr10	87820027	87820043	protein_coding	Dram1	intron	ENSMUSG00000020057	ProperStrand	24	chr1	162967495	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-8.6266
chr12	110796449	110796484	lincRNA	Meg3	exon	ENSMUSG00000021268	ProperStrand	61	chr2	4974190	4974207	protein_coding	Optn	exon	ENSMUSG00000026672	ProperStrand	451	1	-9.2412
chr9	42953376	42954912	protein_coding	Pou2f3	exon	ENSMUSG00000032015	ProperStrand	12	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-6.8317
chr13	73694528	73694546	protein_coding	Slc6a3	exon	ENSMUSG00000021609	NonProperStrand	7	chr2	26493363	26493496	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	4	-inf
chrX	103170686	103170786	protein_coding	Magt1	intron	ENSMUSG00000031232	ProperStrand	12	chr15	34370545	34370622	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-6.6995
chr19	5800170	5800260	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr13	96284094	96284135	protein_coding	F2rl1	exon	ENSMUSG00000021678	ProperStrand	28	1	-9.0766
chr10	110374849	110375732	protein_coding	Csrp2	exon	ENSMUSG00000020186	ProperStrand	24	chr4	131399490	131399506	protein_coding	Mecr	exon	ENSMUSG00000028910	NonProperStrand	109	6	-19.6078
chr4	143027927	143028559	protein_coding	Oog4	exon	ENSMUSG00000047799	NonProperStrand	99	chr15	53154414	53154434	protein_coding	Ext1	intron	ENSMUSG00000061731	ProperStrand	24	1	-14.1632
chr6	54379743	54379760	lincRNA	9130019P16Rik	exon	ENSMUSG00000073067	ProperStrand	255	chr18	63238394	63238410	protein_coding	Fam38b	exon	ENSMUSG00000041482	NonProperStrand	50	1	-10.7797
chr7	124047585	124047675	LTR	MT2B	ERVL	chr7MT2B124047415	ProperStrand	1	chr7	124046835	124046915	Other	RMER1B	Other	chr7RMER1B124046515	NonProperStrand	1	1	-inf
chrX	7245448	7245538	protein_coding	Plp2	utr3	ENSMUSG00000031146	ProperStrand	88	chr10	39978273	39978353	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	10	-19.3885
chr8	87196339	87196400	protein_coding	Nacc1	utr3	ENSMUSG00000001910	ProperStrand	130	chr19	8799827	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-3.4872
chr2	168907027	168907049	LINE	Lx8	L1	chr2Lx8168906877	NonProperStrand	1	chr18	35716832	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-inf
chr12	112215257	112215273	protein_coding	Ankrd9	exon	ENSMUSG00000037904	NonProperStrand	35	chr3	123210921	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.9916
chr5	100855902	100855974	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr15	79908929	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	3	-1.2458
chr10	66673447	66673471	protein_coding	Jmjd1c	intron	ENSMUSG00000037876	ProperStrand	110	chr2	22444483	22444505	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-6.5728
chr2	158451026	158451043	protein_coding	Actr5	exon	ENSMUSG00000037761	NonProperStrand	94	chr7	147094875	147094892	protein_coding	Kndc1	exon	ENSMUSG00000066129	NonProperStrand	17	2	-19.9373
chr13	51743572	51743703	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	chr15	98350185	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	7	-3.6275
chr13	31423991	31424043	lincRNA	Gm11376	intron	ENSMUSG00000087140	NonProperStrand	1	chr4	131865867	131865966	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr4	151730301	151730737	protein_coding	Chd5	exon	ENSMUSG00000005045	NonProperStrand	147	chr2	28085010	28085055	protein_coding	Olfm1	exon	ENSMUSG00000026833	ProperStrand	3	1	-17.9514
chr17	8735100	8735117	protein_coding	Pde10a	intron	ENSMUSG00000023868	NonProperStrand	78	chr1	162967512	162967566	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-2.9992
chr5	151525894	151531472	protein_coding	Pds5b	exon	ENSMUSG00000034021	ProperStrand	21	chr7	116663715	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-7.4505
chr17	80996977	80996999	protein_coding	Map4k3	exon	ENSMUSG00000024242	ProperStrand	7	chr11	6428060	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-7.4403
chrX	20505236	20505455	protein_coding	Cfp	exon	ENSMUSG00000001128	NonProperStrand	3	chr2	32818853	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-11.7908
chr7	91031849	91031939	protein_coding	Mesdc1	utr5	ENSMUSG00000070462	ProperStrand	19	chr4	131865891	131865971	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.7782
chr18	14432821	14432838	DNA	URR1B	MER1_type	chr18URR1B14432815	ProperStrand	4	chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	1	-10.0499
chr17	75010375	75010396	protein_coding	Birc6	exon	ENSMUSG00000024073	ProperStrand	110	chr16	23111690	23111812	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.0320
chr19	44188450	44188530	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr5	145532304	145532394	protein_coding	Trrap	intron	ENSMUSG00000045482	ProperStrand	399	1	-4.1005
chr3	85941944	85942433	protein_coding	Rps3a	exon	ENSMUSG00000028081	ProperStrand	177	chr9	15119733	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-0.9854
chr10	122002351	122002412	LINE	L1Md_F2	L1	chr10L1Md_F2122002095	NonProperStrand	23	chr16	23110829	23110873	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.4133
chr10	104351987	104352007	Other	RMER1A	Other	chr10RMER1A104351322	ProperStrand	15	chr10	77451424	77451475	protein_coding	Pfkl	exon	ENSMUSG00000020277	ProperStrand	179	1	-13.9397
chr15	99070172	99070188	protein_coding	Kcnh3	exon	ENSMUSG00000037579	NonProperStrand	44	chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	2	-13.3249
chr13	75905620	75905650	protein_coding	Ell2	intron	ENSMUSG00000001542	ProperStrand	110	chr5	130295414	130295526	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	4	-13.1828
chr5	151519071	151519100	protein_coding	Pds5b	exon	ENSMUSG00000034021	ProperStrand	21	chr1	162966004	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-5.6256
chr16	18240187	18240277	protein_coding	Ranbp1	exon	ENSMUSG00000005732	ProperStrand	22	chr5	130300473	130300553	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.3511
chr13	74443034	74443050	protein_coding	Pdcd6	exon	ENSMUSG00000021576	NonProperStrand	1	chr18	35714144	35714244	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-inf
chr17	15880055	15880145	protein_coding	Chd1	exon	ENSMUSG00000023852	ProperStrand	82	chr9	120037947	120038027	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-4.1108
chr4	120822464	120822564	protein_coding	Rlf	exon	ENSMUSG00000049878	ProperStrand	58	chr9	15118332	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	4	-11.7903
chr11	77995240	77995266	protein_coding	Rpl23a	intron	ENSMUSG00000058546	ProperStrand	121	chr11	77995185	77995239	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	2	-7.9557
chr4	131908300	131908400	lincRNA	Gm17300	exon	ENSMUSG00000091021	ProperStrand	109	chr15	99329179	99329195	protein_coding	Faim2	utr3	ENSMUSG00000023011	NonProperStrand	3	1	-18.5322
chr3	33957104	33957133	protein_coding	Fxr1	exon	ENSMUSG00000027680	ProperStrand	58	chr5	130300434	130300524	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.5677
chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	chr9	50816824	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	1	-7.5677
chr9	67068023	67068055	protein_coding	Tln2	utr3	ENSMUSG00000052698	ProperStrand	79	chr9	15119630	15119710	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.1645
chr3	40496658	40496674	protein_coding	Intu	exon	ENSMUSG00000060798	NonProperStrand	17	chr16	23110828	23110860	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.8783
chr9	120862032	120864299	protein_coding	Ctnnb1	exon	ENSMUSG00000006932	ProperStrand	214	chr1	162966010	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-1.4636
chr3	154765124	154765214	protein_coding	Lrriq3	utr3	ENSMUSG00000028182	ProperStrand	1	chr3	157727174	157727264	protein_coding	Lrrc40	intron	ENSMUSG00000063052	NonProperStrand	26	1	-inf
chr8	97352281	97353095	protein_coding	Ciapin1	exon	ENSMUSG00000031781	ProperStrand	24	chr5	74489627	74489676	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	2	-9.1107
chr6	88457198	88457239	protein_coding	Sec61a1	exon	ENSMUSG00000030082	ProperStrand	46	chr11	60230509	60230526	protein_coding	Atpaf2	utr5	ENSMUSG00000042709	ProperStrand	12	1	-17.1378
chr5	114196706	114196759	protein_coding	Sart3	exon	ENSMUSG00000018974	ProperStrand	50	chr4	100450804	100450820	protein_coding	Cachd1	intron	ENSMUSG00000028532	NonProperStrand	18	1	-16.1119
chr5	14226340	14226357	protein_coding-noncoding	Sema3e	utr5	ENSMUSG00000063531	NonProperStrand	11	chr7	29136525	29136581	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.5623
chr19	26785161	26790606	protein_coding	Smarca2	exon	ENSMUSG00000024921	ProperStrand	38	chr16	23110894	23110915	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.7634
chr4	128899900	128899916	protein_coding	C77080	exon	ENSMUSG00000050390	NonProperStrand	28	chr4	131908689	131908808	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-8.9348
chr15	72946793	72949836	protein_coding	Eif2c2	exon	ENSMUSG00000036698	ProperStrand	154	chr2	158182156	158182207	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-3.2317
chr10	126634860	126635293	protein_coding	Pip4k2c	utr3	ENSMUSG00000025417	ProperStrand	12	chr16	23110828	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-6.8317
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr18	73693110	73693189	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	4	-2.6813
chr9	108416234	108416255	protein_coding	Qars	exon	ENSMUSG00000032604	ProperStrand	16	chr4	131908235	131908276	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.6705
chr1	136699686	136699702	protein_coding-noncoding	Ppp1r12b	utr3	ENSMUSG00000073557	NonProperStrand	8	chr1	162968439	162968499	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-10.1853
chr2	61892317	61892334	protein_coding	Slc4a10	intron	ENSMUSG00000026904	ProperStrand	40	chr16	23110828	23110873	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.7072
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr7	117189863	117189922	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	2	-1.6253
chr10	63552101	63552119	protein_coding	Lrrtm3	exon	ENSMUSG00000042846	ProperStrand	63	chr17	24857716	24857764	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.2155
chr11	68067261	68067277	protein_coding	Ntn1	intron	ENSMUSG00000020902	NonProperStrand	194	chr4	137311551	137311596	protein_coding	Alpl	exon	ENSMUSG00000028766	ProperStrand	80	1	-10.3811
chr1	40738569	40738588	protein_coding	Slc9a2	utr5	ENSMUSG00000026062	ProperStrand	13	chr1	187119557	187120303	protein_coding	Iars2	exon	ENSMUSG00000026618	ProperStrand	68	1	-16.1632
chr4	86501832	86501861	protein_coding	Rps6	exon	ENSMUSG00000028495	ProperStrand	263	chr9	64143745	64143877	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	6	-inf
chr6	29508753	29515197	protein_coding	Tnpo3	exon	ENSMUSG00000012535	ProperStrand	58	chr16	23111394	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-5.6470
chr7	148154114	148154208	protein_coding	Ifitm1	utr5	ENSMUSG00000025491	ProperStrand	18	chr4	129662259	129662276	protein_coding	Bai2	utr5	ENSMUSG00000028782	ProperStrand	119	3	-19.4575
chr6	122677938	122677974	protein_coding	Slc2a3	utr3	ENSMUSG00000003153	ProperStrand	682	chr6	114260511	114260527	protein_coding	Slc6a1	exon	ENSMUSG00000030310	NonProperStrand	147	1	-6.6691
chr2	29035533	29035560	protein_coding	Setx	exon	ENSMUSG00000043535	ProperStrand	187	chr16	23110455	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-0.8039
chr14	35362269	35362286	protein_coding	Ldb3	intron	ENSMUSG00000021798	ProperStrand	6	chr2	57090809	57090827	protein_coding	Gpd2	utr5	ENSMUSG00000026827	ProperStrand	93	1	-17.0255
chr10	80266845	80266935	protein_coding	Sf3a2	exon	ENSMUSG00000020211	ProperStrand	50	chr13	96100554	96100634	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	17	-inf
chr14	45993204	45993258	protein_coding	Styx	exon	ENSMUSG00000053205	ProperStrand	4	chr7	117166732	117166822	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-10.4200
chr3	79629273	79629292	protein_coding	Tmem144	exon	ENSMUSG00000027956	ProperStrand	2	chr5	130300521	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-9.6890
chr19	11857619	11859888	protein_coding	Stx3	exon	ENSMUSG00000041488	ProperStrand	37	chr17	24665438	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-5.8863
chr15	102844825	102844841	protein_coding	Hoxc5	exon	ENSMUSG00000022485	ProperStrand	40	chr8	13416896	13416912	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-7.2609
chr3	121995857	121995901	lincRNA	Gm17494	intron	ENSMUSG00000057359	ProperStrand	5	chr9	120037898	120037976	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-9.7957
chr2	101792123	101792186	protein_coding	Ldlrad3	utr3	ENSMUSG00000048058	ProperStrand	53	chr4	131908261	131908351	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.6010
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr9	100845897	100845997	protein_coding	Stag1	intron	ENSMUSG00000037286	NonProperStrand	7	1	-9.3156
chr9	48148720	48148737	protein_coding	Fam55b	utr5	ENSMUSG00000032028	ProperStrand	25	chr7	117189889	117189989	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.9939
chr8	39984447	39984537	LINE	L1_Mur1	L1	chr8L1_Mur139983303	NonProperStrand	1	chr8	40858085	40858165	LINE	Lx2B	L1	chr8Lx2B40857183	ProperStrand	1	1	-inf
chr1	123455896	123456738	protein_coding	Ddx18	exon	ENSMUSG00000001674	ProperStrand	41	chr12	32867194	32867212	protein_coding	Pik3cg	intron	ENSMUSG00000020573	NonProperStrand	4	1	-21.8874
chr16	15629541	15629647	protein_coding	Mcm4	exon	ENSMUSG00000022673	ProperStrand	51	chr16	23111454	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.4898
chr16	18549443	18549459	protein_coding	Gnb1l	intron	ENSMUSG00000000884	NonProperStrand	7	chr14	33005161	33005238	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-8.3069
chr2	90235301	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	30051128	30051146	protein_coding	Mdga1	intron	ENSMUSG00000043557	ProperStrand	9	1	-8.2671
chr2	77021920	77021937	protein_coding	Sestd1	utr3	ENSMUSG00000042272	ProperStrand	11	chr10	23505152	23505215	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.1476
chr3	117024936	117024952	protein_coding	D3Bwg0562e	exon	ENSMUSG00000044667	NonProperStrand	2	chr11	101269494	101269520	protein_coding	Aarsd1	exon	ENSMUSG00000075528	ProperStrand	30	1	-inf
chr15	93295656	93319471	protein_coding	Pphln1	exon	ENSMUSG00000036167	ProperStrand	20	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-7.1923
chr10	127527148	127527182	protein_coding	Atp5b	utr3	ENSMUSG00000025393	ProperStrand	612	chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	1	-4.9046
chr5	34968239	34968256	protein_coding	Add1	intron	ENSMUSG00000029106	ProperStrand	88	chr7	116664800	116664868	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.9145
chr14	22321455	22321474	protein_coding	Myst4	intron	ENSMUSG00000021767	ProperStrand	151	chr18	75161533	75161560	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-5.3866
chr18	66623079	66623179	protein_coding	Pmaip1	utr3	ENSMUSG00000024521	ProperStrand	3	chr1	162965571	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-9.4650
chr7	117189958	117190048	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	NonProperStrand	17	chr2	158182203	158182283	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	NonProperStrand	8	1	-19.2248
chr2	90235314	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	101238274	101238291	protein_coding	G6pc	utr3	ENSMUSG00000078650	ProperStrand	6	1	-9.1372
chr10	5990177	5990244	protein_coding	Akap12	utr3	ENSMUSG00000038587	ProperStrand	1008	chr9	42776910	42776961	protein_coding	Arhgef12	utr3	ENSMUSG00000059495	ProperStrand	16	1	-10.3517
chr14	69972465	69972483	protein_coding	Entpd4	exon	ENSMUSG00000022066	ProperStrand	17	chr5	121655021	121655153	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-6.2021
chr14	118882433	118882466	protein_coding	Abcc4	utr3	ENSMUSG00000032849	ProperStrand	137	chr18	33954917	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-3.7173
chr17	23912161	23912181	antisense	Gm16275	.	ENSMUSG00000086719	NonProperStrand	3	chr16	23111377	23111505	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-6.9982
chr2	164235576	164235666	protein_coding-noncoding	Rbpjl	utr5	ENSMUSG00000017007	NonProperStrand	1	chr2	164235787	164235867	protein_coding	Rbpjl	exon	ENSMUSG00000017007	NonProperStrand	1	1	-inf
chr15	76735037	76735080	protein_coding	Rpl8	exon	ENSMUSG00000003970	ProperStrand	191	chr1	183835928	183835981	protein_coding	Enah	utr3	ENSMUSG00000022995	ProperStrand	196	2	-13.6951
chr13	74555457	74555479	LTR	MuRRS4-int	ERV1	chr13MuRRS4-int74555358	NonProperStrand	1	chr17	24858160	24858580	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	1	-inf
chr3	90310290	90310367	protein_coding	2500003M10Rik	utr5	ENSMUSG00000001017	ProperStrand	28	chr11	69483189	69483279	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.8243
chr4	43505807	43505908	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr11	69730442	69731467	protein_coding	Eif5a	exon	ENSMUSG00000078812	ProperStrand	164	2	-2.6813
chr15	100648732	100648749	protein_coding	Slc4a8	utr3	ENSMUSG00000023032	ProperStrand	15	chr7	116663634	116663724	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-5.1056
chr14	61113419	61113436	LINE	L1MB3	L1	chr14L1MB361113375	NonProperStrand	72	chr18	35714193	35714272	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-3.1117
chr15	82980074	82980225	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr19	8963086	8963178	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	16	-2.3212
chr4	43505732	43505822	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	NonProperStrand	174	chr12	45404774	45404793	protein_coding	Pnpla8	intron	ENSMUSG00000036257	NonProperStrand	4	1	-16.9115
chr15	8311719	8311743	protein_coding	Nipbl	exon	ENSMUSG00000022141	ProperStrand	45	chr16	23111437	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.6772
chr12	110045074	110045096	protein_coding	Yy1	intron	ENSMUSG00000021264	ProperStrand	31	chr11	69483155	69483237	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-6.1882
chrX	12681850	12684213	protein_coding	Usp9x	exon	ENSMUSG00000031010	ProperStrand	174	chr9	78326631	78326775	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-4.2706
chr10	110910354	110934690	protein_coding	Nap1l1	intron	ENSMUSG00000058799	ProperStrand	185	chr5	130300477	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	7	-8.9844
chr17	47759299	47759389	protein_coding-noncoding	Med20	utr5	ENSMUSG00000092558	ProperStrand	2	chr9	40611856	40611926	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	1	-15.6227
chr18	10052133	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr5	120889875	120889892	protein_coding	Lhx5	intron	ENSMUSG00000029595	NonProperStrand	106	1	-7.6644
chr14	80262508	80262525	lincRNA	Gm6999	intron	ENSMUSG00000075495	ProperStrand	265	chr2	130101241	130101310	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	2	-6.2926
chr6	119303310	119303410	protein_coding	Adipor2	utr3	ENSMUSG00000030168	ProperStrand	79	chr9	15118550	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	1	-8.7903
chr15	78273322	78273374	protein_coding	Tmprss6	intron	ENSMUSG00000016942	NonProperStrand	6	chr10	23505187	23505277	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-18.1125
chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	chr16	18240864	18240937	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	1	-5.3489
chr2	26249410	26249510	protein_coding	Pmpca	utr3	ENSMUSG00000026926	NonProperStrand	1	chr7	117189991	117190068	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-inf
chr19	5797443	5801082	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr1	162968225	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	4	-6.2577
chr15	81535201	81535223	protein_coding	Rangap1	utr3	ENSMUSG00000022391	ProperStrand	69	chr11	48616641	48616696	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	2	-14.3663
chr4	59488560	59488622	protein_coding	Rod1	utr3	ENSMUSG00000028382	ProperStrand	52	chr4	131908251	131908341	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.6297
chr11	100233693	100233748	protein_coding	Jup	exon	ENSMUSG00000001552	ProperStrand	123	chr7	116664809	116664899	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.4090
chr8	108228551	108228568	protein_coding	E130303B06Rik	exon	ENSMUSG00000013155	NonProperStrand	6	chr1	88252836	88252885	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-11.3791
chr5	140915992	140916961	protein_coding	Eif3b	exon	ENSMUSG00000056076	ProperStrand	66	chr10	110918599	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-5.6118
chr13	109154066	109154085	protein_coding	Depdc1b	intron	ENSMUSG00000021697	ProperStrand	19	chr11	102294588	102294612	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	1	-11.2234
chr13	81962988	81963009	SINE	B1F2	Alu	chr13B1F281962960	ProperStrand	15	chr11	69483131	69483188	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-5.0353
chr14	60167546	60167636	protein_coding	Cab39l	utr3	ENSMUSG00000021981	ProperStrand	11	chr12	106269464	106269544	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	3	-17.1449
chrX	50613089	50613437	protein_coding	Fam122b	exon	ENSMUSG00000036022	ProperStrand	20	chr11	6428077	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.2839
chr8	73118817	73118858	protein_coding	Isyna1	exon	ENSMUSG00000019139	NonProperStrand	3	chr4	131865853	131865953	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	NonProperStrand	39	1	-19.3826
chr2	112219813	112219829	protein_coding	2410042D21Rik	intron	ENSMUSG00000027132	ProperStrand	10	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.0395
chr9	75473767	75473783	protein_coding	Lysmd2	exon	ENSMUSG00000032184	NonProperStrand	20	chr4	131908357	131908410	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.2521
chr11	77317914	77317931	protein_coding	Git1	exon	ENSMUSG00000011877	ProperStrand	95	chr2	91436228	91436336	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-6.5852
chr17	71197504	71197579	protein_coding	Tgif1	intron	ENSMUSG00000047407	ProperStrand	64	chr5	130300423	130300513	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.3995
chr8	96543600	96546731	protein_coding	Nudt21	exon	ENSMUSG00000031754	ProperStrand	33	chr11	80415108	80415125	protein_coding	Myo1d	exon	ENSMUSG00000035441	ProperStrand	144	1	-12.7634
chr14	65432347	65432419	protein_coding	Hmbox1	intron	ENSMUSG00000021972	ProperStrand	35	chr11	69481387	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-4.2039
chr2	162905424	162909311	protein_coding	Mybl2	utr3	ENSMUSG00000017861	ProperStrand	230	chr4	131865856	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-1.8363
chr7	109569994	109575681	protein_coding	Stim1	exon	ENSMUSG00000030987	ProperStrand	24	chr16	23111396	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	5	-12.7174
chr4	57958073	57958174	protein_coding	Txn1	intron	ENSMUSG00000028367	ProperStrand	31	chr1	162967515	162967566	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	4	-15.0002
chr17	56257328	56257344	LTR	RLTR25B	ERVK	chr17RLTR25B56257276	NonProperStrand	75	chr11	62416599	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-4.7351
chr2	25312429	25313191	protein_coding	Clic3	exon	ENSMUSG00000015093	ProperStrand	79	chr4	21606097	21606114	protein_coding	Prdm13	exon	ENSMUSG00000040478	ProperStrand	51	1	-13.0919
chr2	153075175	153075255	protein_coding-noncoding	Pofut1	utr5	ENSMUSG00000046020	ProperStrand	1	chr18	88880231	88880321	protein_coding	Socs6	intron	ENSMUSG00000056153	ProperStrand	12	1	-inf
chr17	45704803	45704821	protein_coding	Hsp90ab1	utr3	ENSMUSG00000023944	ProperStrand	1627	chr17	36097663	36097764	protein_coding	Abcf1	exon	ENSMUSG00000038762	ProperStrand	206	1	-4.3315
chr17	46798799	46798887	protein_coding	Cul7	exon	ENSMUSG00000038545	ProperStrand	38	chr1	183105750	183105831	protein_coding	Wdr26	utr3	ENSMUSG00000038733	ProperStrand	9	1	-17.9268
chr7	52380998	52384084	protein_coding	Rpl13a	utr3	ENSMUSG00000074129	ProperStrand	269	chr16	23111373	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	19	-16.1708
chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr7	99743662	99743678	protein_coding	Ankrd42	intron	ENSMUSG00000041343	ProperStrand	3	1	-12.7981
chr14	99476695	99476785	protein_coding	Dis3	intron	ENSMUSG00000033166	ProperStrand	17	chr10	23505200	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.3129
chr9	107442362	107442421	protein_coding	Cyb561d2	exon	ENSMUSG00000037190	ProperStrand	5	chr2	130103466	130103500	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-13.2241
chr10	80714435	80714452	protein_coding	Zfr2	utr3	ENSMUSG00000034949	NonProperStrand	10	chr16	23109034	23109062	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-10.9330
chr15	97811251	97811267	protein_coding	Col2a1	exon	ENSMUSG00000022483	ProperStrand	34	chr16	23111385	23111409	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.1231
chr4	21606097	21606114	protein_coding	Prdm13	exon	ENSMUSG00000040478	ProperStrand	51	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-7.3066
chr17	13972288	13983303	protein_coding	Mllt4	exon	ENSMUSG00000068036	ProperStrand	156	chr4	53873606	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	1	-7.1402
chr12	102267202	102267218	protein_coding	Ccdc88c	utr5	ENSMUSG00000021182	ProperStrand	151	chr2	147009105	147009122	protein_coding	Nkx2-2	utr3	ENSMUSG00000027434	NonProperStrand	84	1	-10.7848
chr9	74919397	74964013	protein_coding	Myo5a	utr5	ENSMUSG00000034593	ProperStrand	89	chr16	38158107	38158187	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	1	-7.8622
chr4	134926614	134927796	protein_coding	A330049M08Rik	exon	ENSMUSG00000043924	ProperStrand	130	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.9491
chr16	37882619	37882719	protein_coding	Lrrc58	utr3	ENSMUSG00000034158	ProperStrand	23	chr19	8799046	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-7.7455
chr18	34116126	34116144	protein_coding	Epb4.1l4a	intron	ENSMUSG00000024376	NonProperStrand	6	chr11	77995028	77995078	protein_coding	Rpl23a	exon	ENSMUSG00000058546	ProperStrand	121	1	-16.5523
chr9	61220705	61220836	protein_coding	Tle3	utr5	ENSMUSG00000032280	ProperStrand	88	chr11	60370927	60370943	protein_coding	Alkbh5	utr3	ENSMUSG00000042650	ProperStrand	203	1	-10.0992
chr8	127413386	127413466	protein_coding	Gnpat	utr3	ENSMUSG00000031985	ProperStrand	20	chr19	8963083	8963173	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.2716
chr11	88706003	88706395	protein_coding	Akap1	exon	ENSMUSG00000018428	ProperStrand	45	chr10	23505152	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-3.0673
chr2	29014439	29014455	protein_coding	Setx	exon	ENSMUSG00000043535	ProperStrand	187	chr19	46144020	46144064	protein_coding	Pprc1	exon	ENSMUSG00000055491	ProperStrand	143	2	-14.6975
chr8	72712807	72712825	protein_coding	Slc25a42	exon	ENSMUSG00000002346	NonProperStrand	7	chr7	29136525	29136578	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-6.5022
chr17	13112450	13112511	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	chr14	63287581	63287609	snoRNA	ENSMUSG00000089531_SNORA73	.	ENSMUSG00000089531	ProperStrand	123	1	-3.2396
chr2	29852002	29886731	protein_coding	Spna2	intron	ENSMUSG00000057738	ProperStrand	222	chr11	69481334	69481431	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	6	-8.4629
chr12	111931349	111931366	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr12	82825392	82825492	protein_coding	Map3k9	exon	ENSMUSG00000042724	ProperStrand	92	1	-7.4070
chr3	52388277	52388294	SINE	B4A	B4	chr3B4A52388218	ProperStrand	169	chr11	95820756	95820785	protein_coding	Igf2bp1	utr3	ENSMUSG00000013415	ProperStrand	140	1	-9.5359
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr4	122970479	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	2	-3.2295
chr8	122480595	122480689	protein_coding	Usp10	utr3	ENSMUSG00000031826	ProperStrand	98	chr17	24857795	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	5	-8.2379
chr2	109852640	109852656	protein_coding	Lgr4	exon	ENSMUSG00000050199	ProperStrand	27	chr7	116664794	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-9.8389
chr11	87240291	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	chr12	55797769	55797883	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	13	-20.5789
chr8	34911964	34912042	protein_coding	Rbpms	intron	ENSMUSG00000031586	ProperStrand	58	chr7	52381972	52382010	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-6.7792
chr11	8464414	8464489	protein_coding	Tns3	intron	ENSMUSG00000020422	ProperStrand	81	chr9	120039294	120039384	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	1	-8.9219
chr19	23215858	23215874	protein_coding	Klf9	utr5	ENSMUSG00000033863	ProperStrand	83	chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-7.2145
chr9	120038586	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	NonProperStrand	28	chr5	121655026	121655116	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	NonProperStrand	38	1	-15.7782
chr3	101630763	101638934	protein_coding	Mab21l3	exon	ENSMUSG00000044313	ProperStrand	11	chr4	131866155	131866245	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-7.0035
chr9	78326620	78326661	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr17	28017181	28017224	protein_coding	Uhrf1bp1	exon	ENSMUSG00000039512	ProperStrand	79	1	-5.7928
chr9	78023113	78023213	misc_RNA	7SK	.	ENSMUSG00000065037	NonProperStrand	6	chr6	55027613	55027644	protein_coding	Gars	exon	ENSMUSG00000029777	NonProperStrand	1	1	-inf
chr11	78020758	78020785	protein_coding	Supt6h	utr3	ENSMUSG00000002052	ProperStrand	119	chr3	68889046	68889146	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-2.0739
chr11	40529429	40535214	protein_coding	Hmmr	exon	ENSMUSG00000020330	ProperStrand	61	chr4	131908361	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.3950
chr17	11697425	11697441	protein_coding	Park2	intron	ENSMUSG00000023826	NonProperStrand	26	chr12	88511498	88511549	protein_coding	Tmed8	utr3	ENSMUSG00000034111	ProperStrand	22	1	-17.0625
chr19	5274139	5274195	protein_coding	Sf3b2	utr3	ENSMUSG00000024853	ProperStrand	102	chr4	131908236	131908329	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	6	-6.7506
chr6	135729282	135729298	protein_coding	Grin2b	exon	ENSMUSG00000030209	ProperStrand	8	chr15	97207284	97207341	protein_coding	Fam113b	intron	ENSMUSG00000044250	ProperStrand	10	1	-19.4909
chr2	158182149	158182742	lincRNA	9430008C03Rik	intron	ENSMUSG00000085385	ProperStrand	1039	chr2	158182156	158182307	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	503	-19.7675
chr5	141000555	141000572	protein_coding	Chst12	exon	ENSMUSG00000036599	NonProperStrand	42	chr8	32260334	32260426	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	5	-19.2224
chr15	79913288	79913342	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr6	83028938	83028955	protein_coding	Pcgf1	exon	ENSMUSG00000069678	ProperStrand	2	2	-inf
chr14	55513315	55513690	protein_coding	Pabpn1	exon	ENSMUSG00000022194	ProperStrand	22	chr19	11015616	11015632	protein_coding	Gpr44	exon	ENSMUSG00000034117	NonProperStrand	118	1	-13.9917
chr4	56916632	56916687	protein_coding-noncoding	D730040F13Rik	utr3	ENSMUSG00000055296	ProperStrand	5	chr11	102070303	102070337	protein_coding	Hdac5	intron	ENSMUSG00000008855	ProperStrand	45	3	-19.6660
chr8	13014869	13014885	protein_coding	Mcf2l	exon	ENSMUSG00000031442	NonProperStrand	35	chr9	15119631	15119699	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.6006
chr14	119105279	119105369	protein_coding	Abcc4	utr5	ENSMUSG00000032849	ProperStrand	137	chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	1	-10.0285
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr10	127558897	127558949	protein_coding	Baz2a	exon	ENSMUSG00000040054	ProperStrand	274	1	-5.7816
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr5	74489564	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	5	-3.9453
chr16	23110986	23111010	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr2	158182180	158182280	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	2	-2.4316
chr7	140182194	140182764	protein_coding	Ctbp2	exon	ENSMUSG00000030970	ProperStrand	89	chr19	8963049	8963129	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.6462
chr2	156129430	156129452	protein_coding	Phf20	intron	ENSMUSG00000038116	NonProperStrand	4	chr2	158182215	158182291	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	3	-19.8076
chr18	35101558	35101658	protein_coding	Hspa9	exon	ENSMUSG00000024359	ProperStrand	166	chr9	64143849	64143879	protein_coding	Tipin	intron	ENSMUSG00000032397	ProperStrand	32	1	-12.5420
chr1	138072303	138072364	protein_coding	Kif21b	utr3	ENSMUSG00000041642	ProperStrand	77	chr8	13876975	13877003	protein_coding	Zfp828	intron	ENSMUSG00000047710	ProperStrand	32	4	-20.9815
chr11	120148960	120148976	protein_coding	Bahcc1	exon	ENSMUSG00000039741	NonProperStrand	268	chr10	127480691	127480727	protein_coding	Naca	exon	ENSMUSG00000061315	ProperStrand	50	1	-10.6800
chr16	17157290	17157386	protein_coding	Ube2l3	intron	ENSMUSG00000038965	ProperStrand	29	chr11	97642955	97643007	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	8	-inf
chr2	35565577	35565667	protein_coding	Dab2ip	exon	ENSMUSG00000026883	ProperStrand	93	chr17	24857717	24857849	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	11	-19.1134
chr2	32565297	32565370	protein_coding	Cdk9	exon	ENSMUSG00000009555	ProperStrand	12	chr11	62035958	62035974	protein_coding	Specc1	utr3	ENSMUSG00000042331	ProperStrand	11	1	-19.9991
chr2	168606426	168606476	SINE	B4A	B4	chr2B4A168606335	NonProperStrand	1	chr8	129468846	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-inf
chr2	179928399	179928489	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr14	76247720	76247800	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-1.1481
chr10	36716431	36716471	protein_coding	Hdac2	intron	ENSMUSG00000019777	ProperStrand	36	chr11	6428039	6428139	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-6.9589
chr5	136611800	136611816	protein_coding	Lrwd1	exon	ENSMUSG00000029703	NonProperStrand	51	chr4	131908418	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.6592
chr5	141275905	141275921	protein_coding	Gna12	intron	ENSMUSG00000000149	ProperStrand	54	chr9	15119993	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-7.4631
chr12	104330679	104330695	protein_coding	Unc79	intron	ENSMUSG00000021198	NonProperStrand	25	chr14	79517726	79517746	protein_coding	1300010F03Rik	intron	ENSMUSG00000058997	NonProperStrand	10	1	-18.4945
chr11	77980115	77980136	protein_coding	Nek8	utr3	ENSMUSG00000017405	ProperStrand	7	chr13	51743615	51743703	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	3	-19.6212
chr5	107066930	107067020	protein_coding	Zfp644	exon	ENSMUSG00000049606	ProperStrand	35	chr19	8800355	8800434	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-4.5474
chr6	83318070	83318086	protein_coding	Tet3	exon	ENSMUSG00000034832	NonProperStrand	93	chr5	121655016	121655131	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.9496
chr12	109444578	109445337	protein_coding	Ccdc85c	exon	ENSMUSG00000084883	ProperStrand	157	chr8	13876112	13876202	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-5.2530
chr12	53618101	53618181	protein_coding	Arhgap5	exon	ENSMUSG00000035133	ProperStrand	16	chr16	23111413	23111503	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.4608
chr16	20652807	20654687	protein_coding	Psmd2	exon	ENSMUSG00000006998	ProperStrand	99	chr6	115758050	115758130	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-4.5046
chr7	31099008	31099098	protein_coding	Alkbh6	exon	ENSMUSG00000042831	ProperStrand	5	chr3	123210878	123210958	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-6.8746
chr2	26451868	26451884	protein_coding	Gm20532	intron	ENSMUSG00000092356	ProperStrand	46	chr2	166890503	166890556	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-8.0889
chr18	6203695	6208249	protein_coding	Kif5b	utr3	ENSMUSG00000006740	ProperStrand	65	chr9	15119666	15119766	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	5	-11.6287
chr12	73185898	73185916	protein_coding	2810055F11Rik	exon	ENSMUSG00000019718	ProperStrand	4	chr9	15119630	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-19.0888
chr16	16323855	16324068	protein_coding	Dnm1l	exon	ENSMUSG00000022789	NonProperStrand	38	chr15	79908956	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-6.3728
chr7	3581337	3581353	protein_coding	Tfpt	utr5	ENSMUSG00000006335	ProperStrand	19	chr2	139504270	139504288	protein_coding	Ism1	utr5	ENSMUSG00000074766	ProperStrand	8	1	-18.8166
chr2	164521970	164521987	SINE	B4A	B4	chr2B4A164521909	ProperStrand	41	chr1	63225589	63225620	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-7.4266
chr14	66290467	66290485	protein_coding	Scara5	intron	ENSMUSG00000022032	NonProperStrand	5	chr5	108336363	108336386	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-9.9783
chr2	167836657	167836685	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	chr4	133742939	133742956	protein_coding	Ccdc21	utr5	ENSMUSG00000037443	ProperStrand	112	1	-10.8790
chr12	88609110	88609190	protein_coding	Ahsa1	exon	ENSMUSG00000021037	ProperStrand	58	chr8	98269982	98270072	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-5.6079
chr7	49731685	49731762	protein_coding	Zfp141	exon	ENSMUSG00000092416	ProperStrand	17	chr1	162967513	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-5.9112
chr11	97889055	97890791	protein_coding	Rpl19	exon	ENSMUSG00000017404	ProperStrand	120	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-0.9913
mmu-miR-2137	0	17	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	chr1	157780228	157780244	protein_coding	Cep350	exon	ENSMUSG00000033671	ProperStrand	48	1	-12.0052
chr6	124678926	124678968	protein_coding	Ptpn6	exon	ENSMUSG00000004266	ProperStrand	3	chr4	57706987	57707003	protein_coding	Palm2	intron	ENSMUSG00000090053	NonProperStrand	187	2	-inf
chr12	17552938	17552994	protein_coding	Odc1	intron	ENSMUSG00000011179	ProperStrand	173	chr3	123210882	123210972	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	7	-7.6675
chr10	99923613	99923629	protein_coding	Tmtc3	exon	ENSMUSG00000036676	NonProperStrand	9	chr17	47278369	47278385	protein_coding	Trerf1	intron	ENSMUSG00000064043	ProperStrand	56	1	-17.2395
chr1	90123798	90124639	protein_coding	Heatr7b1	utr5	ENSMUSG00000079429	ProperStrand	147	chr18	35102297	35102368	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-4.8394
chr7	16925582	16925613	protein_coding	Sae1	intron	ENSMUSG00000052833	ProperStrand	29	chr13	49779676	49779776	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-8.4710
chrX	51079024	51079041	protein_coding	Zfp36l3	exon	ENSMUSG00000059334	ProperStrand	13	chr2	63936034	63936053	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-10.9683
chr11	97238784	97238803	protein_coding-noncoding	Socs7	utr5	ENSMUSG00000038485	NonProperStrand	1	chr16	23110962	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr5	115994209	115994299	protein_coding-noncoding	Pxn	utr5	ENSMUSG00000029528	NonProperStrand	1	chr5	115993958	115994048	protein_coding	Pxn	intron	ENSMUSG00000029528	NonProperStrand	3	1	-inf
chr3	94683692	94683792	protein_coding	Pogz	exon	ENSMUSG00000038902	ProperStrand	65	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	16	-19.6074
chr17	34253197	34253271	protein_coding	Brd2	utr5	ENSMUSG00000024335	ProperStrand	69	chr2	26494708	26494734	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.8579
chr7	95266597	95266613	protein_coding	Grm5	intron	ENSMUSG00000049583	NonProperStrand	145	chr11	62416600	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-3.4955
chr6	88458570	88458621	protein_coding	Sec61a1	exon	ENSMUSG00000030082	ProperStrand	46	chr8	73032214	73032282	protein_coding	2810422J05Rik	utr3	ENSMUSG00000055553	ProperStrand	171	1	-11.7475
chr7	140905933	140906619	protein_coding	Bccip	exon	ENSMUSG00000030983	ProperStrand	19	chr7	51684975	51684994	protein_coding	Lrrc4b	intron	ENSMUSG00000047085	NonProperStrand	6	1	-19.5063
chr5	104895223	104895264	protein_coding	Pkd2	intron	ENSMUSG00000034462	ProperStrand	13	chr11	69483136	69483186	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-5.3217
chr5	137508538	137508555	protein_coding	Vgf	exon	ENSMUSG00000037428	NonProperStrand	13	chr1	91358413	91358430	protein_coding	Agap1	intron	ENSMUSG00000055013	ProperStrand	229	1	-13.7469
chr2	26767738	26767781	protein_coding-noncoding	Rpl7a	utr5	ENSMUSG00000062647	ProperStrand	53	chr6	125136590	125136649	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	1	-6.6875
chr2	25105896	25107254	protein_coding	Ndor1	exon	ENSMUSG00000006471	NonProperStrand	84	chr14	76817277	76817356	protein_coding	Tsc22d1	exon	ENSMUSG00000022010	ProperStrand	86	1	-11.9141
chr14	75715692	75715752	protein_coding	Zc3h13	exon	ENSMUSG00000022000	ProperStrand	42	chr7	112895514	112895530	protein_coding	Tpp1	exon	ENSMUSG00000030894	NonProperStrand	25	1	-15.8106
chr3	11303091	11303107	LTR	RMER20A	ERVK	chr3RMER20A11302961	NonProperStrand	1	chr15	79908929	79908956	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-inf
chr11	11867679	11870432	protein_coding	Grb10	exon	ENSMUSG00000020176	NonProperStrand	159	chr8	32260360	32260426	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-2.8292
chr5	31369897	31369917	protein_coding	Cad	exon	ENSMUSG00000013629	ProperStrand	260	chr7	29136525	29136600	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-0.9536
chr16	36071984	36072000	protein_coding	Ccdc58	utr5	ENSMUSG00000075229	NonProperStrand	55	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-5.3697
chr15	79127736	79127846	protein_coding	Pla2g6	exon	ENSMUSG00000042632	ProperStrand	32	chr4	131908236	131908272	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-4.2981
chr14	49278647	49278665	protein_coding	Otx2	exon	ENSMUSG00000021848	ProperStrand	19	chr2	83642207	83642223	protein_coding	Itgav	exon	ENSMUSG00000027087	ProperStrand	59	1	-15.6688
chr9	120864325	120864502	protein_coding	Ctnnb1	exon	ENSMUSG00000006932	ProperStrand	214	chr18	35102297	35102340	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-4.1257
chr4	133090173	133090190	protein_coding	Nudc	exon	ENSMUSG00000028851	ProperStrand	80	chr7	148634701	148634762	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-3.4518
chr12	102216447	102216466	protein_coding	Ccdc88c	intron	ENSMUSG00000021182	ProperStrand	151	chr1	180885279	180885295	protein_coding	Smyd3	utr3	ENSMUSG00000055067	NonProperStrand	190	1	-9.1509
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr8	87525135	87525238	protein_coding	Hook2	exon	ENSMUSG00000052566	ProperStrand	204	1	-5.3822
chr11	50117931	50120975	protein_coding	Canx	exon	ENSMUSG00000020368	ProperStrand	296	chr5	111121106	111121196	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	9	-21.0912
chr14	35124446	35124462	protein_coding	Glud1	exon	ENSMUSG00000021794	ProperStrand	72	chr16	23111372	23111447	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.0185
chr5	74489543	74489588	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr3	153574575	153574631	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	3	-6.0657
chr11	11867679	11870432	protein_coding	Grb10	exon	ENSMUSG00000020176	NonProperStrand	159	chrX	132673816	132673833	protein_coding	Bex4	intron	ENSMUSG00000047844	NonProperStrand	70	1	-11.0476
chr1	36849510	36849600	protein_coding	Tmem131	utr3	ENSMUSG00000026116	ProperStrand	129	chr4	131865380	131865460	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-2.6160
chr11	101466270	101466351	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	chr8	98269962	98270052	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	2	-2.9160
chr2	130698686	130698776	protein_coding	4930402H24Rik	intron	ENSMUSG00000027309	NonProperStrand	12	chr7	54442364	54442444	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-13.0126
chr12	13227216	13227586	protein_coding	Ddx1	exon	ENSMUSG00000037149	ProperStrand	47	chr1	162965548	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.7261
chr9	78328050	78328072	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr3	157729963	157729979	protein_coding	Lrrc40	utr3	ENSMUSG00000063052	ProperStrand	147	1	-4.5908
chr9	20673185	20673201	protein_coding	A230050P20Rik	utr5	ENSMUSG00000038884	ProperStrand	19	chr5	121655100	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-9.7842
chr17	32957268	32957284	lincRNA	Gm16684	intron	ENSMUSG00000085948	ProperStrand	43	chr18	73693170	73693186	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-6.1796
chr4	131826036	131826125	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	chr19	12086455	12086496	tRNA	tRNA109-ValTAC	.	919903	ProperStrand	96	1	-8.2770
chr6	35459531	35459554	protein_coding	Mtpn	utr3	ENSMUSG00000029840	ProperStrand	18	chr11	68886955	68887033	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-6.5039
chr7	30066541	30066589	protein_coding	Spint2	exon	ENSMUSG00000074227	ProperStrand	82	chr4	132394351	132394462	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	1	-8.5121
chr9	64022790	64024832	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	chr1	162965983	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-0.7364
chr2	128462920	128467079	protein_coding	Anapc1	exon	ENSMUSG00000014355	NonProperStrand	5	chr8	3616132	3616301	protein_coding	Xab2	exon	ENSMUSG00000019470	ProperStrand	52	1	-18.4781
chr2	9985901	9985917	protein_coding	Atp5c1	exon	ENSMUSG00000025781	ProperStrand	138	chr1	162965531	162965585	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.8548
chr2	129998666	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr19	3904233	3904250	protein_coding	Tcirg1	exon	ENSMUSG00000001750	ProperStrand	77	1	-7.6114
chr2	180610252	180610270	lincRNA	Gm14342	intron	ENSMUSG00000086166	NonProperStrand	18	chr17	12875553	12875604	protein_coding	Igf2r	utr3	ENSMUSG00000023830	ProperStrand	151	1	-13.9025
chr7	27980956	27981046	protein_coding	Snrpa	utr5	ENSMUSG00000061479	ProperStrand	56	chr11	68886948	68887038	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	NonProperStrand	12	1	-16.7620
chr13	59748290	59748369	protein_coding	Golm1	intron	ENSMUSG00000021556	ProperStrand	27	chr10	23505190	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.4811
chr9	44197525	44198951	protein_coding	Hyou1	exon	ENSMUSG00000032115	ProperStrand	145	chr18	73693163	73693184	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-3.8359
chr4	50496126	50496216	LINE	L1Md_F2	L1	chr4L1Md_F250496075	NonProperStrand	1	chr4	45241572	45241652	protein_coding	Frmpd1	intron	ENSMUSG00000035615	NonProperStrand	2	1	-inf
chr13	110693373	110693391	protein_coding	Pde4d	utr5	ENSMUSG00000021699	NonProperStrand	36	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	2	-15.8014
chr3	33713610	33713626	protein_coding	Ccdc39	exon	ENSMUSG00000027676	ProperStrand	106	chr5	121655105	121655134	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.7196
chr7	149170855	149171339	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	chr7	29136568	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-0.8611
chr9	61761267	61761288	protein_coding	Rplp1	exon	ENSMUSG00000007892	ProperStrand	116	chr2	174156600	174156616	protein_coding	Gnas	intron	ENSMUSG00000027523	ProperStrand	41	1	-12.7581
chr19	3518356	3521798	protein_coding	Ppp6r3	exon	ENSMUSG00000024908	ProperStrand	63	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-5.1054
chr2	23659502	23659592	LINE	L1_Mus2	L1	chr2L1_Mus223658237	ProperStrand	1	chr2	23659790	23659870	LTR	RLTR45	ERVK	chr2RLTR4523659778	ProperStrand	1	1	-inf
chr9	111159967	111161054	protein_coding	Mlh1	exon	ENSMUSG00000032498	ProperStrand	13	chr17	24857750	24857830	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-5.1456
chr16	38417222	38417241	protein_coding	Pla1a	exon	ENSMUSG00000002847	ProperStrand	32	chr2	26494708	26494798	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.2767
chr4	118809118	118809140	protein_coding	Slc2a1	utr3	ENSMUSG00000028645	ProperStrand	361	chr11	68886974	68887010	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-1.1429
chr13	95924119	95924137	protein_coding	Pde8b	intron	ENSMUSG00000021684	NonProperStrand	13	chr10	80644961	80645038	protein_coding	Eef2	utr3	ENSMUSG00000034994	ProperStrand	2244	1	-9.1850
chr5	65654167	65665287	protein_coding	Rfc1	exon	ENSMUSG00000029191	ProperStrand	53	chr16	23110828	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-3.8575
chr2	129998643	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr2	32818804	32818894	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-0.9969
chr2	29036175	29036209	protein_coding	Setx	utr3	ENSMUSG00000043535	ProperStrand	187	chr7	148634703	148634793	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	3	-5.4521
chr14	33655837	33655927	LTR	RLTR19-int	ERVK	chr14RLTR19-int33655690	ProperStrand	1	chr14	33792421	33792511	protein_coding	Wdfy4	intron	ENSMUSG00000051506	NonProperStrand	11	1	-inf
chr2	158185580	158185655	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chrX	113862544	113862571	snoRNA	ENSMUSG00000088518_SNORA9	.	ENSMUSG00000088518	ProperStrand	280	1	-3.5285
chr7	133726521	133726538	protein_coding	Cln3	exon	ENSMUSG00000030720	ProperStrand	87	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.2262
chr7	35709413	35709456	protein_coding	Pepd	exon	ENSMUSG00000063931	ProperStrand	12	chr16	23110454	23110521	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.4970
chr15	76181892	76181982	protein_coding	Maf1	utr5	ENSMUSG00000022553	ProperStrand	9	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-11.2656
chr14	56359701	56360038	protein_coding	Dhrs1	exon	ENSMUSG00000002332	ProperStrand	14	chr4	131908236	131908319	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-9.8417
chr4	88369960	88369977	SINE	B3	B2	chr4B388369920	NonProperStrand	22	chr10	80644724	80644806	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-8.1062
chr9	107959196	107959286	protein_coding	Rnf123	exon	ENSMUSG00000041528	ProperStrand	12	chr16	23110913	23110993	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-9.5315
chr16	91227718	91227735	protein_coding	Olig2	utr3	ENSMUSG00000039830	NonProperStrand	78	chr3	157729963	157729979	protein_coding	Lrrc40	utr3	ENSMUSG00000063052	ProperStrand	147	1	-10.9872
chr9	107948491	107948591	protein_coding	Ip6k1	utr3	ENSMUSG00000032594	ProperStrand	61	chr14	76247763	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-4.1407
chr5	73701635	73701652	protein_coding	Ociad1	exon	ENSMUSG00000029152	ProperStrand	51	chr6	142442665	142444112	protein_coding	Ldhb	exon	ENSMUSG00000030246	ProperStrand	224	1	-10.9990
chr8	97375713	97375803	protein_coding-noncoding	Coq9	utr5	ENSMUSG00000031782	NonProperStrand	1	chr8	97376007	97376087	protein_coding	Coq9	intron	ENSMUSG00000031782	NonProperStrand	11	1	-inf
chr4	124132209	124132225	lincRNA	1700057H15Rik	intron	ENSMUSG00000084757	ProperStrand	40	chr4	117882222	117882246	protein_coding	Ptprf	utr3	ENSMUSG00000033295	ProperStrand	337	1	-10.6728
chr2	120341747	120341780	protein_coding	Zfp106	exon	ENSMUSG00000027288	ProperStrand	199	chr7	117189882	117189917	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-1.3558
chr15	9042828	9042918	protein_coding	Skp2	utr3	ENSMUSG00000054115	ProperStrand	14	chr9	15120993	15121035	snoRNA	ENSMUSG00000065265_SNORA32	.	ENSMUSG00000065265	ProperStrand	101	3	-inf
chr14	51427123	51427203	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr10	79630658	79632639	protein_coding	Cirbp	utr5	ENSMUSG00000045193	ProperStrand	3	1	-13.5673
chr12	99756958	99756975	protein_coding	Kcnk10	exon	ENSMUSG00000033854	NonProperStrand	37	chr5	140188790	140188808	protein_coding	Micall2	intron	ENSMUSG00000036718	ProperStrand	6	1	-18.2174
chr4	83105768	83105795	protein_coding	Psip1	exon	ENSMUSG00000028484	ProperStrand	104	chr15	82725599	82725636	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	1	-7.4249
chr15	83770046	83770063	protein_coding	Efcab6	intron	ENSMUSG00000022441	ProperStrand	60	chr12	17552961	17553084	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	2	-8.3825
chr16	36772113	36772130	protein_coding	Slc15a2	exon	ENSMUSG00000022899	ProperStrand	13	chr7	116663634	116663711	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-12.8682
chr14	26705562	26705634	protein_coding	Anxa11	utr3	ENSMUSG00000021866	ProperStrand	30	chr18	35714190	35714255	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.7548
chr4	3762218	3762293	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	chr18	33954840	33954930	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	3	-2.1966
chr2	26493424	26493514	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr15	61819101	61819128	protein_coding	Myc	exon	ENSMUSG00000022346	NonProperStrand	4	1	-11.8409
chr14	31649434	31649473	protein_coding	Tmem110	intron	ENSMUSG00000006526	ProperStrand	13	chr9	120039533	120039596	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	3	-14.6795
chr7	149415064	149415154	protein_coding	Krtap5-5	utr3	ENSMUSG00000073785	NonProperStrand	1	chr7	149398266	149398356	protein_coding	Gm7579	exon	ENSMUSG00000073786	NonProperStrand	1	1	-inf
chr3	35725890	35725907	protein_coding	Atp11b	exon	ENSMUSG00000037400	NonProperStrand	18	chr1	90123798	90124639	protein_coding	Heatr7b1	utr5	ENSMUSG00000079429	ProperStrand	147	1	-13.9610
chr15	77593504	77593521	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chrX	99381891	99382747	protein_coding	Rps4x	exon	ENSMUSG00000031320	ProperStrand	139	1	-7.1334
chr2	32070338	32070428	protein_coding	Prrc2b	exon	ENSMUSG00000039262	ProperStrand	344	chr15	98350185	98350265	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-1.6722
chr6	87842204	87842234	protein_coding	Copg	exon	ENSMUSG00000030058	ProperStrand	68	chr4	131865852	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-6.4385
chr7	52378398	52378451	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	chr1	39605595	39605695	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	2	-4.8007
chr8	113578417	113578481	protein_coding	Aars	exon	ENSMUSG00000031960	ProperStrand	355	chr10	110918606	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-0.7141
chr10	90075788	90075806	protein_coding	Anks1b	intron	ENSMUSG00000058589	NonProperStrand	230	chr11	106362301	106362378	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-3.2890
chr11	100749437	100749471	protein_coding	Stat3	utr3	ENSMUSG00000004040	ProperStrand	20	chr9	15119329	15119429	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	2	-11.7564
chr10	61154414	61154514	protein_coding	Sar1a	utr3	ENSMUSG00000020088	ProperStrand	15	chr10	127009061	127009475	protein_coding	Lrp1	exon	ENSMUSG00000040249	ProperStrand	151	1	-14.2820
chr14	58223205	58223305	protein_coding	Xpo4	exon	ENSMUSG00000021952	ProperStrand	39	chr3	85944557	85944610	snoRNA	ENSMUSG00000064390_Rnu73b	.	ENSMUSG00000064390	ProperStrand	164	1	-12.1649
chrY	1004369	1004388	LTR	RMER17B	ERVK	chrYRMER17B1003530	NonProperStrand	5	chr9	56986695	56986719	protein_coding	Man2c1	exon	ENSMUSG00000032295	ProperStrand	13	1	-19.9979
chr5	110728170	110728319	protein_coding	Pole	exon	ENSMUSG00000007080	ProperStrand	125	chr11	106362671	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-5.9533
chr1	89325198	89325298	protein_coding	Gigyf2	utr5	ENSMUSG00000048000	ProperStrand	128	chr3	123210854	123210931	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-0.9701
chr7	52382787	52382833	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	chr18	35102297	35102342	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-0.8604
chr4	88922162	88922179	protein_coding	Cdkn2a	intron	ENSMUSG00000044303	ProperStrand	13	chr11	6428088	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-6.1494
chr11	77571693	77571709	SINE	B4A	B4	chr11B4A77571664	ProperStrand	6	chr18	35716762	35716815	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-6.6008
chr19	10681371	10681461	protein_coding	Ddb1	exon	ENSMUSG00000024740	ProperStrand	304	chr12	92811933	92812013	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	1	-5.3655
chr7	28959595	28960041	protein_coding	Fbl	exon	ENSMUSG00000046865	ProperStrand	52	chr11	69483190	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	5	-12.3490
chr10	82153240	82153256	protein_coding	Glt8d2	utr5	ENSMUSG00000020251	NonProperStrand	24	chr11	119955048	119955097	protein_coding	2410002I01Rik	exon	ENSMUSG00000025377	ProperStrand	9	1	-19.3656
chr7	34918042	34918074	protein_coding	Wtip	exon	ENSMUSG00000036459	ProperStrand	19	chr7	52382753	52382826	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-9.0664
chr9	88345613	88345631	protein_coding	Syncrip	utr3	ENSMUSG00000032423	ProperStrand	35	chr7	118219585	118219615	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-5.2089
chr14	66932516	66932538	LTR	ORR1B1-int	MaLR	chr14ORR1B1-int66932100	ProperStrand	1	chr10	110918577	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-inf
chr19	8986122	8986222	protein_coding	Ganab	exon	ENSMUSG00000071650	ProperStrand	145	chr11	62418037	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-3.8676
chr7	54203394	54206230	protein_coding	Uevld	exon	ENSMUSG00000043262	ProperStrand	23	chr18	35716832	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.8840
chr12	26995143	26995186	protein_coding	Rnf144a	utr3	ENSMUSG00000020642	ProperStrand	15	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-9.7267
chr17	34709444	34709460	protein_coding	Notch4	exon	ENSMUSG00000015468	NonProperStrand	3	chr5	108334208	108334292	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-11.1157
chr14	96988122	96988178	snoRNA	ENSMUSG00000064581_SNORA30	.	ENSMUSG00000064581	ProperStrand	146	chr16	23110454	23110521	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-2.1548
chrX	83547356	83547372	protein_coding	Mageb4	intron	ENSMUSG00000035427	NonProperStrand	191	chr14	123349757	123349807	protein_coding	Tmtc4	exon	ENSMUSG00000041594	ProperStrand	3	1	-17.3730
chr2	133668649	133668739	LTR	IAPEY3_LTR	ERVK	chr2IAPEY3_LTR133668593	NonProperStrand	1	chr2	133668914	133668994	LTR	MMERVK10C-int	ERVK	chr2MMERVK10C-int133668908	NonProperStrand	1	1	-inf
chr6	4704725	4704825	protein_coding	Peg10	exon	ENSMUSG00000092035	ProperStrand	102	chr5	74489641	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	3	-7.2567
chr2	90235292	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr16	43886791	43886847	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	4	-2.6062
chr4	101138148	101138229	protein_coding	Ak4	utr3	ENSMUSG00000028527	ProperStrand	20	chr16	23110454	23110524	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.4825
chr5	122623180	122623270	protein_coding	Ppp1cc	exon	ENSMUSG00000004455	ProperStrand	46	chr4	116875187	116875249	snRNA	ENSMUSG00000070228_U5	.	ENSMUSG00000070228	ProperStrand	131	2	-18.8297
chr5	138749869	138750098	protein_coding	Stag3	exon	ENSMUSG00000036928	ProperStrand	53	chr14	33005038	33005084	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	2	-7.0774
chr11	5344505	5344521	protein_coding	Znrf3	exon	ENSMUSG00000041961	ProperStrand	63	chr3	123210906	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.9875
chr17	34089435	34089516	protein_coding	Rps18	exon	ENSMUSG00000008668	ProperStrand	111	chr7	129211286	129211376	protein_coding	Ubfd1	exon	ENSMUSG00000030870	ProperStrand	21	1	-14.2070
chr6	47738067	47738091	misc_RNA	Y_RNA	.	ENSMUSG00000065701	ProperStrand	129	chr11	86538690	86539773	protein_coding	Cltc	exon	ENSMUSG00000047126	ProperStrand	319	1	-8.4327
chr3	95980314	95980410	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	chr17	71980646	71980680	snoRNA	ENSMUSG00000093289_Snord92	.	ENSMUSG00000093289	ProperStrand	56	3	-15.8149
chr11	97642952	97643014	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	chr9	40611665	40611736	snoRNA	ENSMUSG00000075876_Snord14c	.	ENSMUSG00000075876	ProperStrand	104	6	-10.6594
chr4	137549983	137601271	protein_coding	Eif4g3	utr5	ENSMUSG00000028760	ProperStrand	42	chr15	79913319	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.2623
chr11	119712723	119717602	protein_coding	Rptor	exon	ENSMUSG00000025583	ProperStrand	76	chr4	116875158	116875248	snRNA	ENSMUSG00000070228_U5	.	ENSMUSG00000070228	ProperStrand	131	1	-11.2703
chr5	144760042	144760065	protein_coding	Ccz1	intron	ENSMUSG00000029617	NonProperStrand	8	chr11	6428095	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-7.1562
chr16	87487933	87489067	protein_coding	Cct8	exon	ENSMUSG00000025613	ProperStrand	65	chr9	99483993	99484009	protein_coding	Dbr1	exon	ENSMUSG00000032469	ProperStrand	162	1	-11.1592
chr6	54379743	54379760	lincRNA	9130019P16Rik	exon	ENSMUSG00000073067	ProperStrand	255	chr1	162965531	162965588	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-0.9864
chr7	13516166	13516200	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr12	112779148	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	2	-1.8002
chr1	4774093	4775663	protein_coding	Mrpl15	exon	ENSMUSG00000033845	ProperStrand	34	chr18	73693166	73693184	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-6.6464
chr1	39902173	39902514	LINE	L2b	L2	chr1L2b39902159	NonProperStrand	28	chr13	58229150	58229213	protein_coding	Hnrnpa0	exon	ENSMUSG00000007836	ProperStrand	110	1	-13.6393
chrX	70962862	70962878	protein_coding	Abcd1	exon	ENSMUSG00000031378	ProperStrand	12	chr9	120037905	120038046	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	4	-19.2819
chr17	84586050	84586067	protein_coding	Zfp36l2	exon	ENSMUSG00000045817	ProperStrand	16	chr19	8799581	8799642	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-9.4340
chr11	115789582	115789629	protein_coding	Recql5	exon	ENSMUSG00000020752	ProperStrand	5	chr8	127404122	127404139	protein_coding	Gnpat	exon	ENSMUSG00000031985	NonProperStrand	13	1	-19.9979
chr7	85937629	85937729	protein_coding	Mrps11	utr3	ENSMUSG00000030611	ProperStrand	2	chr16	23110981	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr11	77996576	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	chr1	161270464	161270554	snoRNA	ENSMUSG00000089536_Scarna3a	.	ENSMUSG00000089536	ProperStrand	247	1	-3.3911
chr5	65694411	65702352	protein_coding	Rfc1	exon	ENSMUSG00000029191	ProperStrand	53	chr17	23806381	23806400	protein_coding	Thoc6	exon	ENSMUSG00000041319	ProperStrand	16	5	-22.3710
chr5	34112034	34112050	protein_coding	Letm1	exon	ENSMUSG00000005299	NonProperStrand	145	chr2	26494763	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.6345
chr8	98269964	98270064	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	chr16	23109028	23109093	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	2	-1.2296
chr8	37631844	37631916	protein_coding	Dlc1	utr3	ENSMUSG00000031523	ProperStrand	89	chr2	157221780	157221870	protein_coding	Manbal	utr3	ENSMUSG00000063019	ProperStrand	11	1	-15.9745
chr11	115661240	115661347	protein_coding	Caskin2	utr3	ENSMUSG00000034471	ProperStrand	17	chr10	23505152	23505178	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.3129
chr6	47731701	47731723	misc_RNA	Y_RNA	.	ENSMUSG00000064945	ProperStrand	93	chr9	70247420	70247504	protein_coding	Myo1e	utr3	ENSMUSG00000032220	ProperStrand	36	1	-13.4638
chr11	115470638	115470736	protein_coding	Mif4gd	exon	ENSMUSG00000020743	ProperStrand	6	chr11	116938617	116938663	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-10.8898
chr4	118951557	118951684	protein_coding	Ybx1	utr3	ENSMUSG00000028639	ProperStrand	171	chr4	117229908	117229940	protein_coding	Eri3	intron	ENSMUSG00000033423	ProperStrand	246	1	-8.3881
chr5	124167423	124167495	protein_coding	Zcchc8	intron	ENSMUSG00000029427	ProperStrand	13	chr7	148634747	148634837	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-7.0006
chr1	162968212	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	chr14	76247711	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	6	-1.5125
chr17	46285129	46285145	protein_coding	Mad2l1bp	exon	ENSMUSG00000034509	NonProperStrand	67	chr2	26494782	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.9099
chr2	79843543	79843559	protein_coding	Pde1a	intron	ENSMUSG00000059173	NonProperStrand	275	chr14	33005085	33005139	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-1.4058
chr1	193656035	193656081	protein_coding	Nek2	utr3	ENSMUSG00000026622	ProperStrand	12	chr14	76247732	76247822	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-7.3616
chr18	74165438	74165456	protein_coding	Mapk4	intron	ENSMUSG00000024558	ProperStrand	34	chr17	33960259	33961283	protein_coding	Rps28	exon	ENSMUSG00000067288	ProperStrand	52	1	-14.7347
chr16	72800514	72800532	protein_coding	Robo1	intron	ENSMUSG00000022883	NonProperStrand	188	chr17	24665420	24665444	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-2.8198
chr11	6520150	6520228	protein_coding-noncoding	Tbrg4	utr3	ENSMUSG00000000384	ProperStrand	7	chr5	130300458	130300548	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-11.0020
chr7	13516163	13516205	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr2	26493366	26493448	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	4	-2.3292
chr14	90363636	90363726	LINE	L1_Mur1	L1	chr14L1_Mur190363556	ProperStrand	1	chr14	90363757	90363837	LINE	Lx	L1	chr14Lx90363725	NonProperStrand	1	1	-inf
chr2	164226383	164226400	protein_coding	Matn4	exon	ENSMUSG00000016995	ProperStrand	15	chr16	23110839	23110889	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.0842
chr9	108111403	108111493	protein_coding	Dag1	exon	ENSMUSG00000039952	ProperStrand	54	chr18	35716684	35716764	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.3452
chr2	102289766	102289782	protein_coding	Fjx1	utr3	ENSMUSG00000075012	ProperStrand	13	chr16	23110891	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-9.0805
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	43277625	43277642	protein_coding	Unc13b	utr3	ENSMUSG00000028456	NonProperStrand	11	1	-7.8469
chr6	108772364	108772480	protein_coding	Arl8b	utr3	ENSMUSG00000030105	ProperStrand	28	chr3	123210854	123210886	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.3984
chr9	64135970	64136020	protein_coding	Tipin	exon	ENSMUSG00000032397	ProperStrand	32	chr12	106269467	106269557	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-5.3536
chrX	155765772	155766307	protein_coding	Rps6ka3	exon	ENSMUSG00000031309	ProperStrand	17	chr4	86221599	86221733	protein_coding	Rraga	utr5	ENSMUSG00000070934	NonProperStrand	4	2	-inf
chr7	26180609	26180627	protein_coding	Lipe	exon	ENSMUSG00000003123	ProperStrand	24	chr16	23110935	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.3518
chr13	58499069	58499130	protein_coding	Hnrnpk	intron	ENSMUSG00000021546	ProperStrand	117	chr15	79913288	79913311	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.4061
chr9	15113307	15113331	protein_coding	Taf1d	exon	ENSMUSG00000031939	ProperStrand	363	chr9	82765262	82765321	protein_coding	Phip	utr3	ENSMUSG00000032253	ProperStrand	43	4	-inf
chr19	8998842	8998871	protein_coding	B3gat3	intron	ENSMUSG00000071649	ProperStrand	2	chr16	23110943	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr5	110587914	110587931	lincRNA	Gm15787	intron	ENSMUSG00000086247	ProperStrand	5	chr1	59761142	59761179	snoRNA	ENSMUSG00000089512_SNORD11	.	ENSMUSG00000089512	ProperStrand	43	1	-19.2672
chr7	29606449	29606909	protein_coding	Hnrnpl	exon	ENSMUSG00000015165	ProperStrand	150	chr1	34246345	34246389	protein_coding	Dst	utr5	ENSMUSG00000026131	ProperStrand	461	1	-7.4021
chr9	40611665	40611747	snoRNA	ENSMUSG00000075876_Snord14c	.	ENSMUSG00000075876	ProperStrand	104	chr1	9932550	9932595	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-6.6369
chr19	5384858	5384948	protein_coding	Sart1	exon	ENSMUSG00000039148	ProperStrand	32	chr2	22444712	22444789	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-9.0395
chr14	51427119	51427184	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr8	82200192	82200243	protein_coding	Otud4	utr3	ENSMUSG00000036990	ProperStrand	45	1	-7.7837
chr4	147430609	147430693	protein_coding	Mthfr	utr3	ENSMUSG00000029009	ProperStrand	19	chr4	131908695	131908785	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	8	-inf
chr16	20675474	20675508	protein_coding	Eif4g1	exon	ENSMUSG00000045983	ProperStrand	199	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-4.6407
chr16	14146058	14146081	protein_coding	4921513D23Rik	exon	ENSMUSG00000060657	ProperStrand	47	chr3	123210854	123210921	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-4.3776
chr14	56159295	56159311	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	chr4	131908689	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-0.7532
chr10	122846172	122846189	protein_coding	Fam19a2	intron	ENSMUSG00000044071	ProperStrand	9	chr17	56753348	56753399	protein_coding	Rpl36	exon	ENSMUSG00000057863	ProperStrand	62	1	-17.1399
chr14	64147095	64147113	protein_coding	Mtmr9	exon	ENSMUSG00000035078	ProperStrand	14	chr1	162965537	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-6.0900
chr4	43505692	43505782	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr4	123415025	123415093	protein_coding	Akirin1	intron	ENSMUSG00000023075	ProperStrand	13	1	-6.0161
chr1	134886918	134891150	protein_coding	Mdm4	utr3	ENSMUSG00000054387	ProperStrand	95	chr16	23111396	23111508	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-3.6365
chr8	98260163	98260228	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	chr19	8800378	8800468	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-0.8993
chr5	115983444	115983460	protein_coding	Pxn	intron	ENSMUSG00000029528	ProperStrand	171	chr17	35985589	35985766	protein_coding	Mdc1	exon	ENSMUSG00000061607	ProperStrand	85	1	-10.5117
chr11	50079778	50079878	protein_coding	Maml1	exon	ENSMUSG00000050567	ProperStrand	29	chr3	123210912	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.3336
chr1	75188742	75188758	processed_transcript	Ankzf1	.	ENSMUSG00000026199	NonProperStrand	1	chr11	6428123	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-inf
chr5	120574162	120574233	protein_coding	Rbm19	exon	ENSMUSG00000029594	ProperStrand	40	chr8	125731536	125731552	protein_coding	Gm20388	intron	ENSMUSG00000092329	ProperStrand	295	1	-10.9387
chr14	22573296	22573314	protein_coding	Samd8	intron	ENSMUSG00000021770	NonProperStrand	2	chr15	34370631	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-10.8601
chr2	26766780	26766829	snoRNA	ENSMUSG00000065258_SNORD24	.	ENSMUSG00000065258	ProperStrand	130	chr10	23505151	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-0.8883
chr17	27239714	27239787	protein_coding	Itpr3	exon	ENSMUSG00000042644	ProperStrand	137	chr9	15118535	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	1	-7.6924
chr2	26493396	26493470	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr4	130305553	130305620	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	2	-1.9570
chr9	88416545	88416769	lincRNA	Snhg5	exon	ENSMUSG00000032424	ProperStrand	13	chr16	23111372	23111447	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.8569
chr9	20946503	20946672	protein_coding	Cdc37	exon	ENSMUSG00000019471	ProperStrand	97	chr18	33954841	33954921	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-2.6460
chr4	118934394	118934411	protein_coding	Cldn19	utr3	ENSMUSG00000066058	NonProperStrand	4	chr4	131908687	131908807	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-6.2660
chr14	73960648	73960748	protein_coding	Sucla2	intron	ENSMUSG00000022110	ProperStrand	20	chr17	24857813	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.2966
chr2	120872244	120872260	protein_coding	Tgm5	exon	ENSMUSG00000053675	NonProperStrand	163	chr3	123210924	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-0.6934
chr1	120732904	120732948	protein_coding	Gli2	exon	ENSMUSG00000048402	ProperStrand	148	chr1	89673610	89673700	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-1.7353
chr7	25779245	25779375	protein_coding	Atp1a3	exon	ENSMUSG00000040907	ProperStrand	66	chr5	105869249	105869265	protein_coding	Lrrc8b	intron	ENSMUSG00000070639	NonProperStrand	11	1	-16.5467
chr19	30217884	30217903	protein_coding	Gldc	exon	ENSMUSG00000024827	ProperStrand	175	chr3	153574575	153574620	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	1	-7.5370
chr1	172165812	172165829	protein_coding	Sh2d1b2	intron	ENSMUSG00000073494	ProperStrand	2	chr8	73419657	73419757	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-10.3981
chr8	73419657	73419757	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	chr13	23618321	23618348	tRNA	tRNA948-ArgTCG	.	184502	ProperStrand	26	5	-18.5585
chr3	14565743	14565762	protein_coding	Lrrcc1	exon	ENSMUSG00000027550	ProperStrand	39	chr11	6428035	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.9898
chr13	113298082	113298172	LTR	RMER19B	ERVK	chr13RMER19B113297604	NonProperStrand	2	chr4	43505816	43505896	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	1	-10.3310
chr2	72808737	72808798	protein_coding	Sp3	exon	ENSMUSG00000027109	ProperStrand	11	chr1	162966826	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-9.6957
chr13	8756716	8766307	protein_coding	Adarb2	utr3	ENSMUSG00000052551	ProperStrand	292	chr4	122970392	122970526	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	2	-7.2063
chr9	70258592	70258682	protein_coding	Ccnb2	exon	ENSMUSG00000032218	ProperStrand	54	chr10	23505167	23505247	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	6	-9.9116
chr8	13174455	13174555	protein_coding	Lamp1	exon	ENSMUSG00000031447	ProperStrand	92	chr11	6519810	6519880	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-7.0914
chr17	35293778	35293810	protein_coding	Prrc2a	exon	ENSMUSG00000024393	ProperStrand	315	chr4	134896930	134898318	protein_coding	Srrm1	exon	ENSMUSG00000028809	ProperStrand	142	2	-13.1611
chr11	84627805	84627876	protein_coding	Mrm1	utr3	ENSMUSG00000018405	ProperStrand	4	chrX	49967074	49967110	protein_coding	Gpc3	utr5	ENSMUSG00000055653	ProperStrand	43	1	-19.1191
chr11	86902928	86902966	protein_coding	Prr11	utr3	ENSMUSG00000020493	ProperStrand	2	chr2	91436236	91436336	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-14.9566
chr1	64168365	64168382	protein_coding	Klf7	intron	ENSMUSG00000025959	NonProperStrand	5	chr9	21310432	21310507	protein_coding	Dnm2	intron	ENSMUSG00000033335	ProperStrand	48	1	-18.4151
chr12	99998069	99998579	protein_coding	Zc3h14	exon	ENSMUSG00000021012	ProperStrand	27	chr5	108336401	108336491	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-10.4730
chr2	167836657	167836685	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	chr4	131865860	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.8901
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	34721473	34721564	protein_coding	Notch4	exon	ENSMUSG00000015468	ProperStrand	11	2	-12.6676
chr8	125741087	125741105	protein_coding	4732415M23Rik	intron	ENSMUSG00000048478	ProperStrand	88	chr15	82980193	82980224	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-6.3805
chr5	74489203	74489261	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr2	27866775	27866791	protein_coding	Col5a1	exon	ENSMUSG00000026837	ProperStrand	35	1	-6.6876
chr19	4731285	4731318	protein_coding	Spnb3	exon	ENSMUSG00000067889	ProperStrand	19	chr11	68887018	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-6.3948
chr15	82980086	82980224	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr1	63225582	63225662	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	11	-19.7450
chr3	157729963	157729979	protein_coding	Lrrc40	utr3	ENSMUSG00000063052	ProperStrand	147	chr2	144087414	144087463	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-4.7961
chr9	40611887	40611915	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr17	35087894	35087962	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-0.8471
chr3	108707090	108707197	protein_coding	Prpf38b	exon	ENSMUSG00000027881	ProperStrand	23	chr16	23110990	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.4133
chr17	33961289	33961412	protein_coding	Rps28	exon	ENSMUSG00000067288	ProperStrand	52	chr2	26494708	26494808	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	5	-14.4983
chr6	125444439	125444456	protein_coding	Cd9	intron	ENSMUSG00000030342	ProperStrand	81	chr4	136106859	136106917	protein_coding	Kdm1a	exon	ENSMUSG00000036940	ProperStrand	83	1	-12.0577
chr6	31475633	31475723	protein_coding	Podxl	intron	ENSMUSG00000025608	ProperStrand	37	chr9	120039540	120039620	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	3	-10.2476
chr17	43843088	43843104	protein_coding	Cyp39a1	intron	ENSMUSG00000023963	NonProperStrand	81	chr5	121655015	121655127	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.1969
chr1	177622598	177622614	protein_coding	Opn3	exon	ENSMUSG00000026525	ProperStrand	31	chr11	86570784	86570834	protein_coding	Cltc	utr5	ENSMUSG00000047126	ProperStrand	319	1	-11.2986
chr4	123068341	123071340	protein_coding	Macf1	exon	ENSMUSG00000028649	ProperStrand	320	chr10	127522376	127522416	snoRNA	ENSMUSG00000093245_AC131120.1	.	ENSMUSG00000093245	ProperStrand	77	1	-9.4581
chr5	100855944	100855974	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr5	108334229	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	7	-3.2227
chr4	154909549	154914693	protein_coding	Gnb1	exon	ENSMUSG00000029064	ProperStrand	69	chr1	162967513	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-3.2194
chr15	43699138	43699155	protein_coding	Tmem74	exon	ENSMUSG00000054409	ProperStrand	5	chr16	23111719	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-16.2723
chr12	112823718	112823790	protein_coding	Mark3	intron	ENSMUSG00000007411	ProperStrand	37	chr16	23110913	23110963	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-5.5936
chr7	13516174	13516204	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr3	85942728	85942780	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	1	-5.1258
chr8	3679433	3679478	protein_coding	Trappc5	exon	ENSMUSG00000040236	ProperStrand	1	chr12	88778651	88778741	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-inf
chr9	21393749	21393849	protein_coding	Carm1	utr3	ENSMUSG00000032185	ProperStrand	82	chr1	162968469	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-5.4667
chrX	7350921	7350948	protein_coding	Tfe3	exon	ENSMUSG00000000134	ProperStrand	10	chr1	88426621	88426672	protein_coding	Ptma	utr3	ENSMUSG00000026238	ProperStrand	385	3	-inf
chr15	60661082	60661099	lincRNA	9930014A18Rik	exon	ENSMUSG00000044513	ProperStrand	54	chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	1	-9.3995
chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	4	-10.5890
chr8	86775399	86775489	protein_coding	Mri1	utr3	ENSMUSG00000004996	ProperStrand	9	chr10	23505155	23505235	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.5477
mmu-miR-376b-3p	4	21	miRNA	mmu-miR-376b-3p	.	mmu-miR-376b-3p	ProperStrand	1	chr3	89903648	89903748	protein_coding	Tpm3	utr3	ENSMUSG00000027940	ProperStrand	55	1	-inf
chrX	137302203	137302219	protein_coding	Mid2	utr3	ENSMUSG00000000266	NonProperStrand	2	chr7	29136546	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-9.5181
chr4	40127227	40127289	protein_coding	Aco1	exon	ENSMUSG00000028405	ProperStrand	25	chr2	26493384	26493474	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-8.9295
chr1	64866579	64907762	protein_coding	Plekhm3	exon	ENSMUSG00000051344	ProperStrand	8	chr10	90581115	90581195	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-8.8764
chr11	115884493	115884534	protein_coding	H3f3b	utr3	ENSMUSG00000016559	ProperStrand	76	chr4	131866206	131866290	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-3.2317
chr13	51743566	51743662	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	chr16	38158174	38158226	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	2	-4.3410
chr5	143197324	143197390	protein_coding	Slc29a4	exon	ENSMUSG00000050822	ProperStrand	14	chr4	131866214	131866283	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-10.6162
chr8	3400382	3400482	protein_coding	Arhgef18	intron	ENSMUSG00000004568	ProperStrand	26	chr7	116664789	116664872	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-4.0736
chr15	74789206	74789281	protein_coding	Ly6e	utr3	ENSMUSG00000022587	ProperStrand	21	chr4	122970484	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-9.5311
chr8	77635906	77635923	protein_coding	Mcm5	intron	ENSMUSG00000005410	ProperStrand	199	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-6.5423
chr16	72800514	72800532	protein_coding	Robo1	intron	ENSMUSG00000022883	NonProperStrand	188	chr15	34370661	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-1.6107
chr7	87856602	87856638	protein_coding	Iqgap1	utr3	ENSMUSG00000030536	ProperStrand	43	chr12	109465854	109465954	protein_coding	Ccdc85c	intron	ENSMUSG00000084883	ProperStrand	157	1	-12.0560
chr1	24217234	24217250	protein_coding	Col9a1	exon	ENSMUSG00000026147	ProperStrand	18	chr16	23110455	23110529	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.6884
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr17	23955820	23955836	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	1	-6.9654
chr10	60692417	60692433	protein_coding	Adamts14	exon	ENSMUSG00000059901	NonProperStrand	127	chr4	131865853	131865886	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.7590
chr9	110845827	110845864	protein_coding	Tdgf1	intron	ENSMUSG00000032494	ProperStrand	218	chr10	127521234	127521269	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	3	-14.2541
chr4	116827010	116827309	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	chr1	89673694	89673774	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-0.9444
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr1	88252836	88252876	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-2.4394
chr17	35299507	35299607	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	chr12	92811869	92811917	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	1	-0.8441
chr2	167836658	167836683	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	chr2	29593832	29593849	protein_coding	Rapgef1	utr3	ENSMUSG00000039844	ProperStrand	58	1	-12.2012
chr11	106857827	106857889	protein_coding	Kpna2	exon	ENSMUSG00000018362	ProperStrand	70	chr1	162968473	162968511	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-5.7760
chr16	32003153	32003169	protein_coding	Senp5	utr5	ENSMUSG00000022772	ProperStrand	8	chr16	23110478	23110578	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-6.3329
chr5	135692544	135692587	protein_coding	Baz1b	exon	ENSMUSG00000002748	ProperStrand	83	chr18	35714143	35714259	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-2.8586
chr2	38012954	38012970	protein_coding	Dennd1a	intron	ENSMUSG00000035392	NonProperStrand	128	chr2	32818883	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-4.0176
chr5	147644725	147645778	protein_coding	Rpl21	utr5	ENSMUSG00000041453	ProperStrand	112	chr7	117189890	117189990	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.2415
chr2	118872924	118872940	protein_coding	Casc5	utr5	ENSMUSG00000027326	ProperStrand	30	chr4	64785559	64785575	protein_coding	Pappa	utr5	ENSMUSG00000028370	ProperStrand	65	1	-14.5579
chr2	84530865	84531297	protein_coding	Zdhhc5	exon	ENSMUSG00000034075	NonProperStrand	144	chr11	69483195	69483237	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.1140
chr17	27738987	27739021	protein_coding	Nudt3	intron	ENSMUSG00000024213	ProperStrand	26	chr9	120038613	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.6046
chr2	129998643	129998703	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr16	37777389	37777407	protein_coding	Fstl1	exon	ENSMUSG00000022816	ProperStrand	179	1	-5.9448
chr3	137849424	137849440	protein_coding	4930579F01Rik	utr5	ENSMUSG00000012042	NonProperStrand	156	chr13	69751288	69751311	protein_coding	Nsun2	exon	ENSMUSG00000021595	ProperStrand	110	1	-10.1787
chr14	124353869	124353886	protein_coding	Itgbl1	exon	ENSMUSG00000032925	ProperStrand	159	chr11	62416603	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-3.3275
chr10	41644311	41644329	protein_coding	Armc2	exon	ENSMUSG00000071324	ProperStrand	281	chr19	8963153	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-0.7600
chr2	158182156	158182179	lincRNA	9430008C03Rik	intron	ENSMUSG00000085385	ProperStrand	1039	chr16	56035866	56035990	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	1	-3.4015
chr11	106405553	106405653	protein_coding	Tex2	exon	ENSMUSG00000040548	ProperStrand	24	chr1	162968473	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-7.9096
chr19	41659121	41659201	protein_coding	Gm340	exon	ENSMUSG00000090673	ProperStrand	19	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.3710
chr15	84030230	84030733	protein_coding	Samm50	exon	ENSMUSG00000022437	ProperStrand	51	chr4	131865856	131865936	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.0255
chr11	102429342	102429362	SINE	PB1	Alu	chr11PB1102429271	ProperStrand	9	chr18	5748790	5748806	protein_coding	Zeb1	exon	ENSMUSG00000024238	ProperStrand	24	1	-19.0204
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr18	35714178	35714291	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	5	-4.1218
chr18	34790052	34790178	protein_coding	Kif20a	exon	ENSMUSG00000003779	ProperStrand	50	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	3	-9.6475
chr7	31333362	31333379	protein_coding	BC053749	intron	ENSMUSG00000036864	NonProperStrand	1	chr17	13115655	13115713	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	1	-inf
chr2	172270204	172270220	protein_coding	2410001C21Rik	exon	ENSMUSG00000027502	NonProperStrand	54	chr2	158457348	158457365	protein_coding	Actr5	exon	ENSMUSG00000037761	NonProperStrand	94	1	-12.6239
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr16	84861716	84861811	protein_coding	Gabpa	utr3	ENSMUSG00000008976	ProperStrand	38	6	-19.6648
chr5	29917395	29917466	protein_coding	Ube3c	exon	ENSMUSG00000039000	ProperStrand	48	chr16	23110968	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.1542
chr18	44555634	44555651	protein_coding	Dcp2	exon	ENSMUSG00000024472	ProperStrand	44	chr10	23505152	23505185	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.6830
chr11	62418013	62418036	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr15	58577335	58577351	protein_coding	Fer1l6	intron	ENSMUSG00000037106	ProperStrand	54	1	-9.1832
chr11	30778277	30778304	protein_coding	Psme4	intron	ENSMUSG00000040850	ProperStrand	40	chr9	120039554	120039644	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-4.0730
chr5	140908937	140908963	protein_coding	Eif3b	exon	ENSMUSG00000056076	ProperStrand	66	chr4	131865855	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.6223
chr8	64017614	64028377	protein_coding	Palld	exon	ENSMUSG00000058056	NonProperStrand	125	chr7	150717335	150717425	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-4.0968
chr10	107700363	107700402	protein_coding	Ppp1r12a	intron	ENSMUSG00000019907	ProperStrand	65	chr9	15119648	15119738	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-6.5891
mmu-miR-5100	5	20	miRNA	mmu-miR-5100	.	mmu-miR-5100	ProperStrand	132	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	3	-9.0972
chr5	143666267	143667097	protein_coding	Actb	exon	ENSMUSG00000029580	ProperStrand	446	chr15	79913288	79913345	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	4	-3.1127
chr1	89480739	89480755	protein_coding	Neu2	utr5	ENSMUSG00000079434	ProperStrand	6	chr2	130101242	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-11.3294
chr7	86855790	86855807	protein_coding	9330171B17Rik	exon	ENSMUSG00000039133	ProperStrand	4	chr18	35716762	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-7.5042
chr13	32913855	32913904	protein_coding	Wrnip1	exon	ENSMUSG00000021400	ProperStrand	16	chr10	80641699	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	1	-10.2233
chr9	53012290	53012368	protein_coding	Ddx10	exon	ENSMUSG00000053289	ProperStrand	40	chr3	88715213	88715230	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-8.0450
chr6	24522085	24522101	protein_coding	Asb15	utr3	ENSMUSG00000029685	NonProperStrand	14	chr12	110923174	110923231	snoRNA	ENSMUSG00000084487_SNORD113	.	ENSMUSG00000084487	ProperStrand	183	1	-14.0460
chr2	26493473	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr15	58884095	58884113	protein_coding	Mtss1	intron	ENSMUSG00000022353	NonProperStrand	51	1	-6.5161
chr8	125408184	125418819	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	chr14	76247725	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-2.1341
chr7	29136635	29136656	protein_coding	Rps16	intron	ENSMUSG00000037563	ProperStrand	191	chr8	13876094	13876226	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	2	-8.0414
chr5	130021910	130022022	protein_coding	Sfswap	exon	ENSMUSG00000029439	ProperStrand	34	chr8	109436141	109436186	protein_coding	Cirh1a	exon	ENSMUSG00000041438	ProperStrand	40	1	-15.2639
chr7	3299118	3299134	protein_coding	Myadm	utr3	ENSMUSG00000068566	NonProperStrand	13	chr9	15118245	15118320	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-10.5334
chr2	149153747	149153766	LTR	RMER17A-int	ERVK	chr2RMER17A-int149153749	NonProperStrand	2	chr7	116664819	116664919	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-inf
chr10	13705413	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr4	151357246	151357296	protein_coding	Thap3	exon	ENSMUSG00000039759	ProperStrand	2	1	-16.1202
chr3	94814473	94814542	protein_coding	Zfp687	exon	ENSMUSG00000019338	ProperStrand	32	chr7	52381973	52382011	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-7.9684
chr4	129192096	129192113	protein_coding	Marcksl1	exon	ENSMUSG00000047945	ProperStrand	52	chr17	24857725	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-4.4776
chr3	31004503	31020364	protein_coding	Skil	intron	ENSMUSG00000027660	ProperStrand	23	chr4	131908234	131908291	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-7.7744
chr13	64863287	64863304	protein_coding	Cntnap3	exon	ENSMUSG00000033063	ProperStrand	87	chr7	52975708	52975808	protein_coding	Rpl18	exon	ENSMUSG00000059070	ProperStrand	116	1	-11.2422
chr8	96999676	96999692	lincRNA	Nlrc5	exon	ENSMUSG00000074151	NonProperStrand	25	chr11	6428054	6428089	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.8448
chr6	52106840	52106858	protein_coding	Hoxa1	exon	ENSMUSG00000029844	NonProperStrand	2	chr5	34234244	34234262	protein_coding	Whsc1	utr5	ENSMUSG00000057406	ProperStrand	409	1	-16.9548
chr3	151751458	151751476	SINE	RSINE1	B4	chr3RSINE1151751222	ProperStrand	11	chr15	76736368	76736560	protein_coding	Rpl8	exon	ENSMUSG00000003970	ProperStrand	191	1	-14.4588
chr2	30904808	30904850	protein_coding	Fnbp1	intron	ENSMUSG00000075415	ProperStrand	53	chr4	3762227	3762293	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	1	-9.7382
chr2	130617594	130617684	protein_coding	4930402H24Rik	exon	ENSMUSG00000027309	ProperStrand	16	chr2	158185531	158185611	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-9.1496
chr9	48832122	48832139	protein_coding	Usp28	exon	ENSMUSG00000032267	ProperStrand	63	chr17	25967598	25967698	protein_coding	Stub1	utr3	ENSMUSG00000039615	ProperStrand	24	1	-15.0812
chr14	27449854	27449876	protein_coding	Fam116a	utr3	ENSMUSG00000040818	ProperStrand	23	chr7	117189957	117190015	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-5.1578
chr11	120148960	120148976	protein_coding	Bahcc1	exon	ENSMUSG00000039741	NonProperStrand	268	chr16	23110454	23110563	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-0.9959
chr10	60541355	60541445	LTR	RLTR23	ERV1	chr10RLTR2360541057	ProperStrand	1	chr19	25645096	25645186	protein_coding	Dmrt1	intron	ENSMUSG00000024837	NonProperStrand	5	1	-inf
chr5	136707644	136707661	protein_coding	Sh2b2	exon	ENSMUSG00000005057	NonProperStrand	101	chr11	116938559	116938649	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	2	-8.4511
chr11	69476056	69476072	protein_coding	Mpdu1	exon	ENSMUSG00000018761	ProperStrand	11	chr9	43615289	43615360	protein_coding	Pvrl1	utr3	ENSMUSG00000032012	ProperStrand	45	3	-21.5794
chr17	47928467	47928485	protein_coding	Tfeb	exon	ENSMUSG00000023990	ProperStrand	78	chr4	122968662	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-5.7647
chr11	83183217	83183253	protein_coding	Ap2b1	exon	ENSMUSG00000035152	ProperStrand	60	chr4	131908809	131908893	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-3.7682
chr8	40681587	40681603	protein_coding	Msr1	intron	ENSMUSG00000025044	ProperStrand	138	chr17	35089181	35089231	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-3.8908
chr16	90386835	90386853	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	chr19	8799022	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-4.7637
chr2	26493392	26493492	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr15	57807534	57807583	tRNA	tRNA913-MetCAT	.	654206	ProperStrand	48	3	-10.1004
chr7	106230028	106230096	protein_coding	Uvrag	intron	ENSMUSG00000035354	ProperStrand	13	chr5	81758898	81758915	protein_coding	Lphn3	exon	ENSMUSG00000037605	ProperStrand	19	1	-18.8581
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr19	8799833	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	4	-2.0688
chr5	122854212	122854229	protein_coding	Arpc3	exon	ENSMUSG00000029465	NonProperStrand	33	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.7641
chr2	103606713	103606744	protein_coding	Caprin1	utr3	ENSMUSG00000027184	ProperStrand	145	chr19	8800358	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-1.9970
chr16	23110986	23111013	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chrX	12681805	12684193	protein_coding	Usp9x	exon	ENSMUSG00000031010	ProperStrand	174	1	-6.8933
chr15	79204695	79204744	protein_coding	Tmem184b	intron	ENSMUSG00000009035	ProperStrand	37	chr2	26494708	26494790	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.0004
chrX	71517906	71517951	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	chr10	23506278	23506313	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-0.9516
chr5	104865438	104865564	protein_coding	Spp1	exon	ENSMUSG00000029304	ProperStrand	52	chr7	28110165	28110181	protein_coding	Ltbp4	exon	ENSMUSG00000040488	ProperStrand	91	1	-12.7657
chr19	8963078	8963168	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	chr12	110887828	110887893	snoRNA	ENSMUSG00000084549_SNORD113	.	ENSMUSG00000084549	ProperStrand	196	8	-9.3496
chr19	44188368	44188448	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr3	30718416	30718493	protein_coding	Sec62	utr3	ENSMUSG00000027706	ProperStrand	12	2	-17.5133
chr9	115219384	115219455	protein_coding	Stt3b	utr5	ENSMUSG00000032437	ProperStrand	66	chr7	52381973	52382006	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-6.5231
chr10	23506839	23506983	protein_coding	Rps12	utr5	ENSMUSG00000061983	ProperStrand	309	chr19	8798760	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-1.8701
chr5	136707644	136707661	protein_coding	Sh2b2	exon	ENSMUSG00000005057	NonProperStrand	101	chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	1	-7.7990
chr9	59527040	59527061	protein_coding	Pkm2	utr3	ENSMUSG00000032294	ProperStrand	1296	chr4	149022419	149022436	protein_coding	Clstn1	utr3	ENSMUSG00000039953	NonProperStrand	4	1	-12.8410
chr6	17237062	17237079	protein_coding	Cav2	utr3	ENSMUSG00000000058	ProperStrand	8	chr2	121949511	121949527	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	1	-14.4338
chr7	52140533	52140735	protein_coding	Med25	exon	ENSMUSG00000002968	ProperStrand	33	chr16	23110909	23110940	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.9284
chr2	90235298	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	179702258	179702279	protein_coding	Adss	exon	ENSMUSG00000015961	ProperStrand	23	1	-6.3423
chr4	3762227	3762274	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	chr11	116938591	116938691	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-2.5769
chr6	83318070	83318086	protein_coding	Tet3	exon	ENSMUSG00000034832	NonProperStrand	93	chr10	23506328	23506347	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-6.0813
chr8	87549008	87549053	protein_coding	Asna1	exon	ENSMUSG00000052456	ProperStrand	25	chr15	98350177	98350267	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	5	-inf
chr15	57978199	57978289	snoRNA	ENSMUSG00000080461_SNORA11	.	ENSMUSG00000080461	ProperStrand	171	chr3	88497866	88497946	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-5.3968
chr12	101092871	101092888	protein_coding	2610021K21Rik	exon	ENSMUSG00000021176	ProperStrand	12	chr2	121176333	121176349	protein_coding	Ppip5k1	exon	ENSMUSG00000033526	ProperStrand	85	1	-15.8742
chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	chr13	49779667	49779737	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-3.1501
chr5	143667079	143667122	protein_coding	Actb	exon	ENSMUSG00000029580	ProperStrand	446	chr12	112779226	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	4	-5.5549
chr4	118991186	118992139	protein_coding	Ppih	exon	ENSMUSG00000060288	ProperStrand	10	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-6.6888
chr15	81599445	81599462	protein_coding	Zc3h7b	exon	ENSMUSG00000022390	NonProperStrand	3	chr15	34370545	34370617	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-9.7644
chr8	131246492	131246751	protein_coding	Itgb1	exon	ENSMUSG00000025809	ProperStrand	35	chr11	97642952	97642968	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-5.8730
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr2	145199197	145199214	sense_intronic	Gm14093	.	ENSMUSG00000087158	NonProperStrand	7	1	-12.2125
chr16	56015946	56015976	protein_coding	Pcnp	utr3	ENSMUSG00000071533	ProperStrand	9	chr16	23110968	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.9939
chr4	55431651	55431707	lincRNA	Gm12505	exon	ENSMUSG00000087070	ProperStrand	447	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	6	-10.6882
chr4	55431651	55431667	lincRNA	Gm12505	exon	ENSMUSG00000087070	ProperStrand	447	chrX	143918848	143918964	snoRNA	ENSMUSG00000084421_SNORA35	.	ENSMUSG00000084421	ProperStrand	293	3	-14.0597
chr12	100453312	100453412	protein_coding	Foxn3	intron	ENSMUSG00000033713	ProperStrand	74	chr11	6428035	6428078	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.8180
chr15	37971684	38008385	protein_coding	Ubr5	utr5	ENSMUSG00000037487	ProperStrand	258	chr11	69481332	69481412	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	4	-4.3553
chr11	83107812	83107902	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	chr16	38158096	38158176	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	1	-4.2657
chr13	55926936	55926952	protein_coding	Pitx1	utr3	ENSMUSG00000021506	NonProperStrand	2	chr11	83822829	83822929	protein_coding	Synrg	exon	ENSMUSG00000034940	ProperStrand	49	1	-inf
chr2	92183521	92183538	protein_coding	Phf21a	intron	ENSMUSG00000058318	NonProperStrand	14	chr19	8798484	8798534	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-8.1240
chr8	12596982	12596999	protein_coding	Spaca7	intron	ENSMUSG00000010435	ProperStrand	2	chr11	69483137	69483191	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-9.6187
chr12	81735312	81735334	protein_coding	Erh	utr3	ENSMUSG00000021131	ProperStrand	20	chr4	131908689	131908791	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.0012
chr11	70465482	70465508	protein_coding	Pfn1	utr3	ENSMUSG00000018293	ProperStrand	55	chr2	157387818	157387877	protein_coding	Blcap	intron	ENSMUSG00000067787	ProperStrand	13	1	-16.5749
chr5	122804459	122810038	protein_coding	Vps29	utr5	ENSMUSG00000029462	ProperStrand	8	chr3	100727317	100728874	protein_coding	Trim45	exon	ENSMUSG00000033233	ProperStrand	59	1	-17.3520
chr12	111933700	111933780	protein_coding-noncoding	Hsp90aa1	utr3	ENSMUSG00000021270	ProperStrand	1	chr12	111933515	111933605	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	1	-inf
chr11	55296195	55296258	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	chr7	52381719	52381741	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	2	-2.1675
chr19	7096618	7096793	protein_coding	Stip1	exon	ENSMUSG00000024966	ProperStrand	100	chr7	30231467	30231592	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	6	-21.4174
chr7	13846274	13846290	protein_coding	6330408A02Rik	utr3	ENSMUSG00000070814	ProperStrand	10	chr17	24857717	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-5.6778
chr1	141068527	141068543	protein_coding	Dennd1b	utr3	ENSMUSG00000056268	ProperStrand	23	chr10	23505152	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-7.2788
chr5	121070747	121071674	protein_coding	Ddx54	exon	ENSMUSG00000029599	ProperStrand	104	chr4	96412508	96412526	protein_coding	Gm12695	intron	ENSMUSG00000078639	ProperStrand	110	1	-10.9911
chr12	111893026	111893105	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr1	162968212	162968273	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-2.3477
chr11	69548831	69548861	protein_coding	Polr2a	exon	ENSMUSG00000005198	ProperStrand	200	chr9	15130832	15130904	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	1	-6.8158
chr11	68067261	68067277	protein_coding	Ntn1	intron	ENSMUSG00000020902	NonProperStrand	194	chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-4.1805
chr7	86569819	86569835	protein_coding	Fanci	exon	ENSMUSG00000039187	NonProperStrand	6	chr1	162965531	162965584	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-7.8657
chr13	55426306	55426360	protein_coding	Prelid1	utr3	ENSMUSG00000021486	ProperStrand	19	chr18	35716832	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-10.4198
chrX	154868099	154868189	LINE	Lx	L1	chrXLx154868060	ProperStrand	1	chrX	154868330	154868420	SINE	MIRb	MIR	chrXMIRb154868336	NonProperStrand	1	1	-inf
chr17	37190732	37190800	protein_coding	Gabbr1	intron	ENSMUSG00000024462	ProperStrand	27	chr10	110918553	110918634	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-4.9663
chr16	75761550	75765200	protein_coding	Hspa13	exon	ENSMUSG00000032932	NonProperStrand	57	chr3	123210854	123210886	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-3.8626
chr7	4731749	4731766	protein_coding	Il11	intron	ENSMUSG00000004371	NonProperStrand	5	chr11	107076586	107076602	protein_coding	Pitpnc1	intron	ENSMUSG00000040430	ProperStrand	46	1	-18.6272
chr9	37312310	37312400	protein_coding	BC024479	intron	ENSMUSG00000042138	ProperStrand	17	chr7	116663634	116663714	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.8573
chr18	44551183	44551290	protein_coding	Dcp2	intron	ENSMUSG00000024472	ProperStrand	44	chr9	104025395	104025411	protein_coding	Ccrl1	intron	ENSMUSG00000079355	ProperStrand	10	5	-inf
chr11	115442080	115442305	protein_coding	Nup85	exon	ENSMUSG00000020739	ProperStrand	33	chr12	110838196	110838230	protein_coding	Rtl1	intron	ENSMUSG00000085925	NonProperStrand	8	1	-17.9208
chr11	120667495	120667511	protein_coding	Fasn	utr3	ENSMUSG00000025153	NonProperStrand	5	chr4	76614453	76614470	protein_coding	Ptprd	intron	ENSMUSG00000028399	ProperStrand	198	1	-16.0603
chr1	24621250	24621561	protein_coding	Gm10925	utr3	ENSMUSG00000090378	ProperStrand	320	chr19	8798740	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	2	-3.3117
chr19	10141066	10141083	protein_coding	Fads2	exon	ENSMUSG00000024665	ProperStrand	47	chr4	154542965	154543036	protein_coding	Ski	intron	ENSMUSG00000029050	ProperStrand	28	1	-15.3523
chr1	153759644	153759664	protein_coding	1700025G04Rik	intron	ENSMUSG00000032666	NonProperStrand	35	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.1952
chr3	88497875	88497980	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	chr5	130300458	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	10	-1.2888
chr18	33157688	33157705	protein_coding	Camk4	intron	ENSMUSG00000038128	NonProperStrand	42	chr19	8800084	8800116	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-8.3223
chr4	131865377	131865516	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	chr14	76247711	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	42	-11.1014
chr1	95583196	95585742	protein_coding	Bok	exon	ENSMUSG00000026278	ProperStrand	7	chr1	120576911	120576936	protein_coding	Tfcp2l1	utr3	ENSMUSG00000026380	ProperStrand	158	2	-inf
chr8	34886442	34886468	protein_coding	Gtf2e2	exon	ENSMUSG00000031585	ProperStrand	5	chr6	134837721	134837760	protein_coding	Gpr19	utr5	ENSMUSG00000032641	ProperStrand	27	1	-19.2031
chr1	95400054	95402130	protein_coding	Sept2	exon	ENSMUSG00000026276	ProperStrand	136	chr19	8800361	8800451	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-2.1004
chr15	77776055	77776071	protein_coding	Foxred2	exon	ENSMUSG00000016552	NonProperStrand	8	chr2	32089115	32089202	protein_coding	Prrc2b	utr3	ENSMUSG00000039262	ProperStrand	344	1	-13.9496
chr7	88214526	88214542	protein_coding	Alpk3	intron	ENSMUSG00000038763	NonProperStrand	7	chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	2	-18.8827
chr4	107915119	107915192	protein_coding	Zyg11b	intron	ENSMUSG00000034636	NonProperStrand	17	chr7	116663711	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-8.0979
chr16	32905646	32905686	protein_coding	Fyttd1	exon	ENSMUSG00000022800	ProperStrand	31	chr5	130300460	130300550	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	4	-12.3502
chr3	121234673	121235101	protein_coding	Slc44a3	exon	ENSMUSG00000039865	ProperStrand	8	chr19	8799026	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-9.9334
chr11	94157275	94158407	protein_coding	Luc7l3	exon	ENSMUSG00000020863	ProperStrand	38	chr16	23111704	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-4.6859
chr4	85016349	85016365	protein_coding	Sh3gl2	intron	ENSMUSG00000028488	NonProperStrand	313	chr8	64017612	64028375	protein_coding	Palld	exon	ENSMUSG00000058056	NonProperStrand	125	1	-8.5333
chr11	97890717	97890742	protein_coding	Rpl19	exon	ENSMUSG00000017404	ProperStrand	120	chr10	62128278	62128294	protein_coding	Stox1	exon	ENSMUSG00000036923	NonProperStrand	3	1	-18.3558
chr4	116260019	116261186	protein_coding	Gpbp1l1	exon	ENSMUSG00000034042	NonProperStrand	106	chr11	55296208	55296275	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	NonProperStrand	5	3	-20.0711
chr2	26494708	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	chr16	38158095	38158227	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	27	-19.3117
chr12	101349399	101349489	protein_coding	Psmc1	intron	ENSMUSG00000021178	ProperStrand	14	chr11	68886926	68887006	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-7.0150
chr13	100203218	100205496	protein_coding	Mtap1b	exon	ENSMUSG00000052727	ProperStrand	76	chr19	8963027	8963080	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-3.4438
chr7	20300470	20300488	antisense	Gm20512	.	ENSMUSG00000092381	ProperStrand	2	chr9	15119630	15119762	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-inf
chr2	121276638	121276663	protein_coding	Serf2	utr3	ENSMUSG00000074884	ProperStrand	22	chr10	40013070	40014058	protein_coding	Amd1	exon	ENSMUSG00000075232	ProperStrand	21	1	-17.2767
chr2	121263394	121263461	protein_coding	Pdia3	utr3	ENSMUSG00000027248	ProperStrand	74	chr4	101313330	101313430	protein_coding	Dnajc6	utr3	ENSMUSG00000028528	ProperStrand	10	1	-16.5279
chr5	115939520	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr7	150717300	150717368	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-0.8710
chr5	74489202	74489230	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr4	134384374	134384390	protein_coding	Tmem57	exon	ENSMUSG00000028826	NonProperStrand	10	1	-9.2451
chr2	82780011	82780101	LINE	L1_Mus3	L1	chr2L1_Mus382779566	ProperStrand	1	chr2	82780126	82780216	SINE	PB1D10	Alu	chr2PB1D1082780095	ProperStrand	1	1	-inf
chr7	116664032	116664129	protein_coding	Rpl27a	exon	ENSMUSG00000046364	ProperStrand	149	chr6	71832550	71832574	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-3.8684
chr8	113404506	113404570	protein_coding	Cog4	exon	ENSMUSG00000031753	ProperStrand	53	chr16	23111389	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	8	-14.8614
chr9	119140684	119140760	polymorphic_pseudogene	Slc22a13b	.	ENSMUSG00000092212	ProperStrand	2	chr5	147646748	147646848	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	1	-15.4219
chr15	100029382	100029399	protein_coding	Dip2b	exon	ENSMUSG00000023026	ProperStrand	48	chrX	141150296	141150315	protein_coding	Zcchc16	intron	ENSMUSG00000071679	ProperStrand	7	1	-18.4552
chr15	6273977	6273994	protein_coding	Dab2	intron	ENSMUSG00000022150	ProperStrand	3	chr5	108336387	108336490	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-11.1796
chr7	28959678	28959827	protein_coding	Fbl	exon	ENSMUSG00000046865	ProperStrand	52	chr11	33745818	33745834	protein_coding	Kcnip1	intron	ENSMUSG00000053519	ProperStrand	45	1	-14.1810
chr5	111847797	111847813	protein_coding	Mn1	exon	ENSMUSG00000070576	NonProperStrand	3	chr9	15118322	15118366	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-9.6743
chr17	45705308	45705341	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr4	120726869	120726886	protein_coding	Col9a2	exon	ENSMUSG00000028626	ProperStrand	35	1	-7.8063
chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	chr4	155366536	155366553	protein_coding	B3galt6	exon	ENSMUSG00000050796	ProperStrand	40	1	-8.9933
chr11	19964035	19994392	protein_coding	Actr2	utr3	ENSMUSG00000020152	ProperStrand	72	chr16	23111381	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	10	-16.6925
chr9	108294020	108294090	protein_coding	Usp4	exon	ENSMUSG00000032612	ProperStrand	29	chr4	131908393	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	6	-15.1359
chr14	76160626	76160664	LTR	MT2B	ERVL	chr14MT2B76160576	NonProperStrand	1	chr17	35089181	35089233	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-inf
chr10	79174558	79174587	protein_coding	Bsg	utr3	ENSMUSG00000023175	ProperStrand	107	chr10	39978363	39978484	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-4.3447
chr7	54443917	54444007	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	chr19	40181214	40181294	protein_coding	Cyp2c50	intron	ENSMUSG00000054827	NonProperStrand	1	1	-inf
chr11	62416575	62418038	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr9	15119647	15119970	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	6	-2.3520
chr6	54379743	54379760	lincRNA	9130019P16Rik	exon	ENSMUSG00000073067	ProperStrand	255	chr14	33005085	33005138	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-1.5147
chr3	95463023	95466399	protein_coding	Mcl1	utr3	ENSMUSG00000038612	ProperStrand	75	chr16	23111694	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-2.9127
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr18	77913045	77913062	protein_coding	8030462N17Rik	exon	ENSMUSG00000047466	NonProperStrand	21	1	-10.7160
chr8	125627224	125627802	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	chr12	60774058	60774112	snoRNA	ENSMUSG00000077603_SNORA3	.	ENSMUSG00000077603	ProperStrand	185	1	-8.3566
chr2	90235313	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chrX	33094710	33094727	LTR	RodERV21-int	ERV1	chrXRodERV21-int33094516	NonProperStrand	8	1	-8.5166
chr5	121655016	121655155	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	chr11	62418013	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	16	-2.4842
chr8	107054004	107054344	protein_coding	Nae1	exon	ENSMUSG00000031878	ProperStrand	13	chr4	131908688	131908708	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.8088
chr18	63156579	63156679	protein_coding	Napg	utr3	ENSMUSG00000024581	ProperStrand	17	chr8	73419654	73419729	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-5.5405
chr6	38384214	38384230	protein_coding	Ubn2	exon	ENSMUSG00000038538	ProperStrand	86	chr4	131865866	131865904	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.2419
chr19	10680065	10680123	protein_coding	Ddb1	utr5	ENSMUSG00000024740	ProperStrand	304	chr8	129471770	129471860	protein_coding	Rbm34	utr3	ENSMUSG00000033931	ProperStrand	22	1	-12.0935
chr1	120580365	120580436	protein_coding	Tfcp2l1	utr3	ENSMUSG00000026380	ProperStrand	158	chr3	108357259	108357349	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-2.7578
chr7	151703548	151703648	protein_coding	Ppfia1	exon	ENSMUSG00000037519	ProperStrand	32	chr1	162965567	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.4550
chr11	106128722	106128760	protein_coding	Smarcd2	exon	ENSMUSG00000078619	ProperStrand	17	chr10	23505189	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	8	-inf
chr2	22444532	22444562	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	chr15	82980102	82980225	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-1.9764
chr1	108619000	108619085	protein_coding	Kdsr	utr3	ENSMUSG00000009905	ProperStrand	17	chr7	116664848	116664870	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-4.8991
chr5	31568774	31569060	protein_coding	Ift172	exon	ENSMUSG00000038564	ProperStrand	28	chr11	97642952	97643018	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.8483
chr17	35379622	35379678	protein_coding	Ddx39b	utr5	ENSMUSG00000019432	ProperStrand	119	chr11	59607124	59607144	protein_coding	Flcn	intron	ENSMUSG00000032633	NonProperStrand	1	1	-inf
chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr5	147646720	147646848	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	4	-0.7793
chr13	55804408	55804428	protein_coding	B230219D22Rik	utr3	ENSMUSG00000045767	ProperStrand	19	chr19	8799592	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-9.0814
chr4	135607206	135607570	protein_coding	Rpl11	exon	ENSMUSG00000059291	ProperStrand	152	chr19	8799855	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-3.2032
chr7	118220325	118220345	protein_coding	Eif4g2	exon	ENSMUSG00000005610	ProperStrand	134	chr17	35089203	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	2	-6.6301
chr8	108734812	108734828	protein_coding	Slc7a6os	utr5	ENSMUSG00000033106	NonProperStrand	29	chr4	131865866	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.9946
chr9	50816824	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	chr10	110918549	110918639	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-2.1398
chr12	32008373	32008473	protein_coding	Lamb1	exon	ENSMUSG00000002900	ProperStrand	87	chr8	96703166	96703728	protein_coding	Mt1	utr5	ENSMUSG00000031765	ProperStrand	92	1	-11.7078
chr11	3873475	3873530	protein_coding	Pes1	exon	ENSMUSG00000020430	ProperStrand	49	chr10	23505152	23505215	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.5211
chr19	18999166	18999184	LINE	Lx7	L1	chr19Lx718998792	ProperStrand	2	chr3	68889051	68889146	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-10.5388
chr17	30301177	30301195	protein_coding	Zfand3	intron	ENSMUSG00000044477	NonProperStrand	7	chr7	117166721	117166744	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-9.1717
chr9	65988783	65988873	LTR	LTR48B	ERV1	chr9LTR48B65988784	ProperStrand	1	chr3	27236710	27236800	protein_coding	Tnfsf10	utr3	ENSMUSG00000039304	NonProperStrand	4	1	-inf
chr17	75147913	75147934	protein_coding	Ttc27	intron	ENSMUSG00000024078	ProperStrand	14	chr5	108336432	108336489	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-7.7830
chr17	35141788	35141990	protein_coding	Vars	exon	ENSMUSG00000007029	ProperStrand	121	chr1	162966009	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-2.3596
chr19	44838697	44838715	protein_coding	Pax2	intron	ENSMUSG00000004231	ProperStrand	6	chr7	116664820	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-7.0474
chr11	93811192	93811238	protein_coding	Gm20390	utr3	ENSMUSG00000091228	ProperStrand	33	chr19	8963035	8963135	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.3267
chr14	77424372	77424388	protein_coding	9030625A04Rik	utr3	ENSMUSG00000044350	NonProperStrand	152	chr7	52382887	52382929	protein_coding	Rpl13a	exon	ENSMUSG00000074129	ProperStrand	269	1	-8.4449
chr6	91676797	91676852	protein_coding	Slc6a6	intron	ENSMUSG00000030096	ProperStrand	206	chr15	79913288	79913316	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-1.5102
chr17	35972920	35972982	protein_coding	Tubb5	exon	ENSMUSG00000001525	ProperStrand	624	chr8	39353430	39353446	protein_coding	Sgcz	intron	ENSMUSG00000039539	ProperStrand	46	1	-9.1614
chr11	30747442	30747471	protein_coding	Psme4	exon	ENSMUSG00000040850	ProperStrand	40	chr18	35716811	35716883	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.8651
chr14	122931205	122931295	LINE	Lx6	L1	chr14Lx6122931203	ProperStrand	1	chr14	122931414	122931504	SINE	B3	B2	chr14B3122931355	NonProperStrand	1	1	-inf
chr17	27110157	27110173	protein_coding	Zbtb9	utr5	ENSMUSG00000079605	ProperStrand	16	chr4	131865867	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.1079
chr4	116242607	116265631	protein_coding	Gpbp1l1	utr5	ENSMUSG00000034042	ProperStrand	12	chr16	23110942	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	7	-19.0936
chr17	27555438	27555464	LTR	ORR1C2	MaLR	chr17ORR1C227555248	NonProperStrand	1	chr12	100630971	100630991	protein_coding	Foxn3	intron	ENSMUSG00000033713	ProperStrand	74	1	-inf
chr15	18266904	18266923	LTR	ORR1B1-int	MaLR	chr15ORR1B1-int18265401	NonProperStrand	1	chr16	23111741	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-inf
chr5	102226038	102226088	protein_coding	Cds1	exon	ENSMUSG00000029330	ProperStrand	9	chr9	65127126	65127142	protein_coding	Cilp	exon	ENSMUSG00000042254	ProperStrand	212	1	-14.6583
chr15	94353277	94353294	protein_coding	Pus7l	utr3	ENSMUSG00000033356	NonProperStrand	1	chr8	64028869	64028962	protein_coding	Palld	utr5	ENSMUSG00000058056	ProperStrand	39	1	-inf
chr2	32818903	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	chr9	64022875	64022923	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	2	-1.8780
chr6	144987956	144987988	protein_coding	Bcat1	exon	ENSMUSG00000030268	ProperStrand	49	chr14	59824751	59824851	protein_coding	Rcbtb1	intron	ENSMUSG00000035469	ProperStrand	39	4	-20.1949
chr7	134040332	134040348	processed_transcript	RP23-142A14.2	.	ENSMUSG00000093768	ProperStrand	2	chr16	11144203	11144303	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	2	-inf
chr1	35975718	35975735	LINE	L3	CR1	chr1L335975690	ProperStrand	1	chr18	78016323	78016346	protein_coding	Atp5a1	exon	ENSMUSG00000025428	ProperStrand	254	1	-inf
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chrX	34622906	34623004	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-1.8218
chr9	45203158	45203240	protein_coding	Fxyd6	utr3	ENSMUSG00000066705	ProperStrand	30	chr5	74489622	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-5.1050
chr9	30235085	30235102	protein_coding	Snx19	exon	ENSMUSG00000031993	ProperStrand	353	chr10	127685499	127685543	protein_coding	Timeless	exon	ENSMUSG00000039994	ProperStrand	53	1	-10.0126
chr6	72180855	72180872	protein_coding	Atoh8	intron	ENSMUSG00000037621	NonProperStrand	61	chr4	63245562	63245579	protein_coding	6330416G13Rik	utr3	ENSMUSG00000045917	ProperStrand	6	1	-17.8701
chr9	78023113	78023193	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr14	76247731	76247821	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	10	-1.7615
chr2	26774447	26774537	protein_coding	Surf2	exon	ENSMUSG00000014873	NonProperStrand	1	chr8	32260359	32260439	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-inf
chr6	93695428	93695445	protein_coding	Magi1	exon	ENSMUSG00000045095	ProperStrand	106	chr2	26493410	26493475	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-2.7149
chr8	125626322	125627098	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	chr5	130300419	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-1.2942
chr8	74020774	74020805	protein_coding	Gtpbp3	intron	ENSMUSG00000007610	ProperStrand	21	chr9	15119698	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-11.0610
chr7	25352391	25352421	protein_coding	Xrcc1	exon	ENSMUSG00000051768	ProperStrand	8	chr9	15118247	15118321	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-7.4559
chr4	46481557	46481657	protein_coding	Anp32b	exon	ENSMUSG00000028333	ProperStrand	229	chr11	116533826	116533893	snoRNA	ENSMUSG00000065640_Snord1c	.	ENSMUSG00000065640	ProperStrand	373	9	-20.4723
chr11	59999851	59999927	protein_coding	Rai1	exon	ENSMUSG00000062115	ProperStrand	25	chr10	23505152	23505179	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.6150
chr1	134330958	134330992	protein_coding	Dstyk	utr5	ENSMUSG00000042046	ProperStrand	11	chr17	35087895	35087946	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-8.6121
chr8	72669159	72669176	protein_coding-noncoding	2310045N01Rik	utr3	ENSMUSG00000002345	ProperStrand	3	chr2	160719588	160719635	protein_coding	Lpin3	intron	ENSMUSG00000027412	ProperStrand	31	2	-inf
chr17	46814084	46814100	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr2	129998665	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	1	-4.1265
chr17	32339470	32339648	protein_coding	Brd4	exon	ENSMUSG00000024002	ProperStrand	121	chr5	32657192	32657208	protein_coding	Plb1	exon	ENSMUSG00000029134	ProperStrand	50	1	-12.2719
chr11	18781373	18781391	protein_coding	Meis1	utr3	ENSMUSG00000020160	ProperStrand	2	chr13	44964974	44965082	protein_coding	Jarid2	intron	ENSMUSG00000038518	ProperStrand	372	1	-17.1669
chr6	3928436	3928516	LINE	L1_Mus1	L1	chr6L1_Mus13928393	ProperStrand	1	chr1	16423421	16423511	protein_coding	Stau2	intron	ENSMUSG00000025920	NonProperStrand	3	1	-inf
chr14	27449499	27449546	protein_coding	Fam116a	utr3	ENSMUSG00000040818	ProperStrand	23	chr19	8963087	8963165	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.0031
chr1	58652508	58652591	protein_coding	Ndufb3	exon	ENSMUSG00000026032	ProperStrand	14	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-8.6732
chr7	36388906	36389233	protein_coding	Ankrd27	exon	ENSMUSG00000034867	ProperStrand	132	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.8516
chr15	103184060	103184087	protein_coding	Itga5	exon	ENSMUSG00000000555	ProperStrand	28	chr17	24856620	24856720	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-7.9503
chr11	77505879	77505932	protein_coding	Nufip2	exon	ENSMUSG00000037857	ProperStrand	36	chr4	131908233	131908319	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.2156
chr4	103713269	103713286	protein_coding	Dab1	intron	ENSMUSG00000028519	NonProperStrand	26	chr5	151755616	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-9.4232
chr15	84101747	84103941	protein_coding	Parvb	exon	ENSMUSG00000022438	ProperStrand	127	chr9	99380832	99380853	protein_coding	Armc8	utr3	ENSMUSG00000032468	ProperStrand	15	1	-14.6295
chr17	28471869	28471888	protein_coding	Tead3	exon	ENSMUSG00000002249	ProperStrand	4	chr16	23111695	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-7.1763
chr12	81353970	81354021	protein_coding	Actn1	intron	ENSMUSG00000015143	ProperStrand	128	chr1	164605942	164605962	protein_coding	Prrc2c	exon	ENSMUSG00000040225	ProperStrand	413	2	-12.6628
chr13	23838722	23838775	protein_coding	Hist1h2bb	exon	ENSMUSG00000075031	ProperStrand	27	chr9	15119715	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	4	-13.4088
chr8	73051744	73051761	protein_coding	Fkbp8	utr5	ENSMUSG00000019428	ProperStrand	52	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.5385
chr5	28115121	28115197	protein_coding	Paxip1	intron	ENSMUSG00000002221	ProperStrand	34	chr16	23110876	23110966	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.8923
chr2	90235299	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	6068288	6068306	protein_coding	1110014N23Rik	exon	ENSMUSG00000024797	ProperStrand	49	1	-4.8520
chr8	73438666	73438683	protein_coding	Mtap1s	exon	ENSMUSG00000019261	ProperStrand	60	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-6.9829
chr10	85410011	85418521	protein_coding	D10Wsu52e	exon	ENSMUSG00000001783	ProperStrand	45	chr7	29136543	29136635	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	9	-20.1185
chr12	73645042	73645149	protein_coding	1810048J11Rik	intron	ENSMUSG00000034501	ProperStrand	11	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-11.1946
chr2	180452737	180452847	protein_coding	2310003C23Rik	utr3	ENSMUSG00000027573	ProperStrand	25	chr15	82980188	82980224	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	3	-20.1419
chr15	60661082	60661099	lincRNA	9930014A18Rik	exon	ENSMUSG00000044513	ProperStrand	54	chr16	23111375	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-2.6689
chr16	37777391	37777408	protein_coding	Fstl1	exon	ENSMUSG00000022816	ProperStrand	179	chr5	108334195	108334255	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-2.7956
chr4	138576794	138576810	protein_coding	Tmco4	exon	ENSMUSG00000041143	ProperStrand	47	chr7	51505224	51505281	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	1	-8.6410
chr11	106649719	106649801	protein_coding	Ddx5	utr5	ENSMUSG00000020719	ProperStrand	181	chr16	23111695	23111785	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	8	-8.2585
chr17	56192705	56192795	protein_coding	Chaf1a	intron	ENSMUSG00000002835	NonProperStrand	4	chr17	56184397	56184487	protein_coding	Chaf1a	intron	ENSMUSG00000002835	ProperStrand	23	1	-18.9843
chr5	135857995	135858011	protein_coding	Pom121	exon	ENSMUSG00000053293	NonProperStrand	94	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-4.9929
chr2	121949510	121949528	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	chr11	6428060	6428169	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	4	-4.1596
chr5	37139544	37139595	protein_coding	Cno	exon	ENSMUSG00000060708	ProperStrand	4	chr11	62416951	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-11.6858
chr11	106649693	106649793	protein_coding	Ddx5	utr5	ENSMUSG00000020719	ProperStrand	181	chr9	79915104	79915120	protein_coding	Senp6	utr5	ENSMUSG00000034252	ProperStrand	110	1	-9.8814
chr5	112799340	112799376	protein_coding	Hps4	exon	ENSMUSG00000042328	ProperStrand	27	chr4	131865381	131865471	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	13	-inf
chr6	128175930	128175956	protein_coding	Tead4	intron	ENSMUSG00000030353	ProperStrand	14	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-11.9854
mmu-miR-1949	7	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr6	125124296	125126163	protein_coding	Ncapd2	exon	ENSMUSG00000038252	ProperStrand	170	1	-6.0848
chr19	27837820	27837836	protein_coding	Rfx3	utr3	ENSMUSG00000040929	ProperStrand	92	chr4	131908253	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.8590
chr6	92104375	92104391	protein_coding	Nr2c2	exon	ENSMUSG00000005893	ProperStrand	101	chr3	97817679	97851651	protein_coding	Notch2	exon	ENSMUSG00000027878	ProperStrand	86	1	-11.5435
mmu-miR-2137	0	18	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-5.2058
chr8	119147914	119147977	protein_coding	Cdyl2	exon	ENSMUSG00000031758	ProperStrand	35	chr1	162968246	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-7.8935
chr6	128383287	128383309	protein_coding	Fkbp4	exon	ENSMUSG00000030357	ProperStrand	114	chr5	121655017	121655107	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.5937
chr11	104203829	104203913	protein_coding	1700081L11Rik	intron	ENSMUSG00000018412	ProperStrand	73	chr1	63225678	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-6.2803
chr19	12910228	12910245	LTR	RMER20B	ERVK	chr19RMER20B12910189	NonProperStrand	5	chr4	129662259	129662276	protein_coding	Bai2	utr5	ENSMUSG00000028782	ProperStrand	119	1	-17.0068
chr5	138321573	138321663	LINE	L1_Mus1	L1	chr5L1_Mus1138320078	NonProperStrand	1	chr7	54442720	54442800	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	1	-inf
chr15	44504363	44504384	protein_coding	Sybu	exon	ENSMUSG00000022340	NonProperStrand	28	chr11	88546494	88546551	protein_coding	Msi2	intron	ENSMUSG00000069769	ProperStrand	159	1	-12.8981
chr15	98350146	98350283	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	chr11	77996574	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	7	-1.8827
chr12	109460710	109460726	protein_coding	Ccdc85c	intron	ENSMUSG00000084883	ProperStrand	157	chr11	106362637	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-5.5084
chr18	10052128	10052154	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr19	8799021	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	4	-6.8305
chr5	141236403	141236512	protein_coding	Gna12	utr3	ENSMUSG00000000149	ProperStrand	54	chr4	134770350	134770383	protein_coding	Clic4	utr3	ENSMUSG00000037242	ProperStrand	84	5	-inf
chr3	32299140	32299181	protein_coding	Pik3ca	intron	ENSMUSG00000027665	ProperStrand	23	chr9	15119646	15119736	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.3979
chr8	28036608	28036688	LINE	L2c	L2	chr8L2c28036499	ProperStrand	1	chr8	28036393	28036483	LTR	MLT1D	MaLR	chr8MLT1D28036058	NonProperStrand	1	1	-inf
chr12	44985893	44985910	SINE	MIRb	MIR	chr12MIRb44985825	ProperStrand	1	chr11	74745952	74748532	protein_coding	Smg6	exon	ENSMUSG00000038290	ProperStrand	29	1	-inf
chr3	94991037	94991053	protein_coding	Gabpb2	utr3	ENSMUSG00000038766	ProperStrand	39	chr15	98350166	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	3	-13.0484
chr10	127485575	127485623	protein_coding	Naca	utr3	ENSMUSG00000061315	ProperStrand	50	chr10	23505152	23505195	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-2.8089
chr8	127201259	127201316	protein_coding-noncoding	Ttc13	utr3	ENSMUSG00000037300	ProperStrand	3	chr7	29136596	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-8.4253
chr17	13116193	13117252	protein_coding	Tcp1	exon	ENSMUSG00000068039	ProperStrand	116	chr7	29136573	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-2.5446
chr11	55260222	55260249	protein_coding	Atox1	utr3	ENSMUSG00000018585	ProperStrand	15	chr6	115757992	115758117	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	3	-18.4648
chr12	107067331	107067421	protein_coding	Papola	exon	ENSMUSG00000021111	NonProperStrand	11	chr7	126952582	126952619	protein_coding	2610020H08Rik	intron	ENSMUSG00000030924	ProperStrand	9	1	-19.9764
chr12	103808033	103808116	protein_coding	Itpk1	utr3	ENSMUSG00000057963	ProperStrand	47	chr16	23110911	23111001	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-4.4107
chr7	4598417	4598510	protein_coding	Ppp6r1	exon	ENSMUSG00000052296	ProperStrand	20	chr1	162967548	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	4	-17.2827
chr1	71074451	71074467	protein_coding	Bard1	utr3	ENSMUSG00000026196	NonProperStrand	2	chr5	108333619	108333648	snoRNA	ENSMUSG00000064453_Snord21	.	ENSMUSG00000064453	ProperStrand	201	1	-18.4499
chr11	96915434	96915483	protein_coding	Osbpl7	exon	ENSMUSG00000038534	ProperStrand	15	chr10	85855414	85855431	protein_coding	Syn3	intron	ENSMUSG00000059602	NonProperStrand	40	1	-17.0745
chr4	147992702	147992786	protein_coding	Tardbp	exon	ENSMUSG00000041459	ProperStrand	120	chr5	111121091	111121181	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	6	-23.6532
chr4	151757043	151757061	protein_coding	Chd5	exon	ENSMUSG00000005045	ProperStrand	51	chr5	108336363	108336409	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-5.1961
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr13	9574684	9574701	protein_coding	Dip2c	exon	ENSMUSG00000048264	NonProperStrand	51	1	-9.6961
chr18	75783605	75783623	protein_coding	Ctif	intron	ENSMUSG00000052928	ProperStrand	41	chr12	88778631	88778735	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-7.2553
chr17	24858084	24858171	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr7	150717298	150717367	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-2.1545
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr13	23830722	23830779	protein_coding	Hist1h1c	exon	ENSMUSG00000036181	ProperStrand	99	2	-6.7160
chr13	46773222	46773269	protein_coding	C78339	utr3	ENSMUSG00000069237	ProperStrand	8	chr4	131865932	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-9.1913
chr11	104342077	104342095	LTR	RMER6C	ERVK	chr11RMER6C104341747	ProperStrand	1	chr17	24558731	24558750	protein_coding	Rnps1	exon	ENSMUSG00000034681	NonProperStrand	3	1	-inf
chr2	90235292	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	52463288	52463306	protein_coding	Dkkl1	intron	ENSMUSG00000030792	ProperStrand	1	1	-inf
chr7	87237142	87237214	protein_coding	Zfp710	utr3	ENSMUSG00000048897	ProperStrand	229	chr4	131908235	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	6	-2.6491
chr1	88247740	88247766	protein_coding	Ncl	intron	ENSMUSG00000026234	ProperStrand	1184	chr13	23653884	23653998	protein_coding	Hist1h3e	exon	ENSMUSG00000069273	ProperStrand	30	1	-8.7484
chr5	108336937	108337017	protein_coding	Rpl5	utr3	ENSMUSG00000058558	ProperStrand	235	chr14	34056914	34057004	protein_coding	Arhgap22	intron	ENSMUSG00000063506	ProperStrand	11	1	-14.0434
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr18	56706574	56708119	protein_coding	Aldh7a1	exon	ENSMUSG00000053644	ProperStrand	14	1	-10.7482
chr11	120501121	120501204	protein_coding	Pycr1	utr3	ENSMUSG00000025140	ProperStrand	17	chr4	131908687	131908744	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.3002
chr12	88488443	88496424	protein_coding	Pomt2	exon	ENSMUSG00000034126	NonProperStrand	331	chr9	15118323	15118356	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-0.8018
chr6	117873735	117874906	protein_coding	Hnrnpf	exon	ENSMUSG00000042079	ProperStrand	147	chr16	23110829	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	8	-1.8825
chr6	47738071	47738092	misc_RNA	Y_RNA	.	ENSMUSG00000065701	ProperStrand	129	chr16	23111754	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-0.8392
chr2	22444872	22444935	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	chr11	55296285	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	3	-3.7857
chr18	6049315	6052878	protein_coding	Arhgap12	exon	ENSMUSG00000041225	ProperStrand	25	chr4	131908265	131908355	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.8464
chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	chr18	74938045	74938145	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	ProperStrand	1022	1	-4.8703
chrX	99445995	99446012	protein_coding	Cited1	utr5	ENSMUSG00000051159	ProperStrand	72	chr11	106362556	106362617	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-7.0417
chr4	44334354	44334427	protein_coding	Melk	intron	ENSMUSG00000035683	ProperStrand	58	chr7	74023341	74023357	protein_coding	Adamts17	intron	ENSMUSG00000058145	NonProperStrand	73	1	-12.9893
chr4	43505770	43505860	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr8	87223594	87223610	protein_coding	Trmt1	exon	ENSMUSG00000001909	NonProperStrand	60	1	-3.0703
chr1	187110884	187110984	protein_coding	Iars2	utr3	ENSMUSG00000026618	ProperStrand	68	chr16	23111754	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-6.8174
chr14	70478520	70478539	protein_coding	Egr3	intron	ENSMUSG00000033730	NonProperStrand	3	chr17	47684132	47684149	protein_coding	Ccnd3	intron	ENSMUSG00000034165	NonProperStrand	17	1	-inf
chr3	104807697	104807775	protein_coding	Cttnbp2nl	exon	ENSMUSG00000062127	ProperStrand	15	chr14	33005143	33005233	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	3	-15.4823
chr2	90235286	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr15	54697505	54697522	protein_coding	Enpp2	exon	ENSMUSG00000022425	ProperStrand	31	1	-5.7479
chr14	55261229	55262990	protein_coding	Acin1	utr3	ENSMUSG00000022185	ProperStrand	67	chr18	33954878	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-5.6559
chr17	34047444	34047534	protein_coding	Daxx	exon	ENSMUSG00000002307	NonProperStrand	3	chr17	34070533	34070623	protein_coding	Rgl2	intron	ENSMUSG00000041354	NonProperStrand	5	1	-inf
chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	chr15	79572771	79572829	protein_coding	Sun2	utr5	ENSMUSG00000042524	ProperStrand	13	1	-11.6159
chr11	78085211	78090570	protein_coding	2610507B11Rik	exon	ENSMUSG00000010277	ProperStrand	246	chr11	6428070	6428160	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	7	-9.6694
chr2	92440278	92440296	protein_coding	Chst1	utr5	ENSMUSG00000027221	ProperStrand	17	chr1	39605594	39605684	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-9.8925
chr4	122960664	122970558	protein_coding	Pabpc4	intron	ENSMUSG00000011257	ProperStrand	85	chr4	131908356	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-3.1020
chr18	13149800	13149877	protein_coding	Impact	utr3	ENSMUSG00000024423	ProperStrand	32	chr4	131865891	131865981	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.8186
chrX	7245464	7245555	protein_coding	Plp2	utr3	ENSMUSG00000031146	ProperStrand	88	chr5	111121118	111121199	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	70	-20.1886
chr2	162949812	162949828	lincRNA	Gm11454	intron	ENSMUSG00000086152	NonProperStrand	1	chr7	117189863	117189922	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-inf
chr11	82578482	82578502	protein_coding	Zfp830	exon	ENSMUSG00000046010	ProperStrand	3	chr10	23505151	23505279	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-12.0722
chr9	102504862	102505257	protein_coding	Cep63	exon	ENSMUSG00000032534	ProperStrand	23	chr1	88252837	88252867	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-8.5640
chr19	39042508	39042533	protein_coding	Hells	utr3	ENSMUSG00000025001	ProperStrand	23	chr11	69483189	69483279	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.1990
chr14	31372957	31373007	protein_coding	Tkt	exon	ENSMUSG00000021957	ProperStrand	160	chr1	45864600	45868971	protein_coding	Wdr75	exon	ENSMUSG00000025995	ProperStrand	24	1	-13.2012
chr11	120440996	120441293	protein_coding	Arhgdia	exon	ENSMUSG00000025132	ProperStrand	39	chr16	23110981	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.5380
chr7	4691730	4691754	protein_coding	Suv420h2	utr5	ENSMUSG00000059851	NonProperStrand	70	chr5	23358029	23358060	snoRNA	ENSMUSG00000093321_Snord93	.	ENSMUSG00000093321	ProperStrand	218	1	-10.4161
chr2	37255593	37255660	snoRNA	ENSMUSG00000077756_Snord90	.	ENSMUSG00000077756	ProperStrand	167	chr5	130300460	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-1.9267
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr10	90581034	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	6	-3.6758
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-7.2227
chr5	34692681	34692698	protein_coding	Rnf4	exon	ENSMUSG00000029110	NonProperStrand	9	chr16	23111373	23111442	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.5836
chr9	84523369	84523385	LTR	MT2A	ERVL	chr9MT2A84522996	ProperStrand	8	chr11	106362313	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-9.9436
chr2	4974190	4974207	protein_coding	Optn	exon	ENSMUSG00000026672	ProperStrand	451	chr11	62416621	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-1.5830
chr12	71386230	71386247	protein_coding	Trim9	intron	ENSMUSG00000021071	NonProperStrand	75	chr13	47120706	47120726	protein_coding	Tpmt	utr3	ENSMUSG00000021376	ProperStrand	10	1	-16.5507
chr5	117583637	117583653	protein_coding	Taok3	utr5	ENSMUSG00000061288	NonProperStrand	13	chr1	88247814	88247836	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-8.1588
chr1	63225632	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	chr2	130101986	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	12	-11.6727
chr4	94253120	94253542	protein_coding	Plaa	exon	ENSMUSG00000028577	ProperStrand	40	chr2	26494708	26494763	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.8534
chr12	58691976	58691992	antisense	4921518K17Rik	.	ENSMUSG00000085851	ProperStrand	75	chr18	61715366	61715383	protein_coding	Csnk1a1	utr5	ENSMUSG00000024576	NonProperStrand	35	1	-13.9540
chr5	75473198	75473215	protein_coding	Gsx2	utr3	ENSMUSG00000035946	ProperStrand	307	chr2	30908636	30909545	protein_coding	Fnbp1	exon	ENSMUSG00000075415	ProperStrand	53	1	-10.2914
chr5	125757952	125757986	protein_coding	Scarb1	utr3	ENSMUSG00000037936	ProperStrand	18	chr11	69483136	69483191	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-7.8155
chr2	90235296	90235338	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	123045841	123045859	protein_coding	Ift81	intron	ENSMUSG00000029469	ProperStrand	14	1	-7.3487
chr1	191058376	191058394	protein_coding	Kcnk2	intron	ENSMUSG00000037624	ProperStrand	56	chr9	15118283	15118372	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.5938
chr13	49044595	49044639	protein_coding	Fam120a	exon	ENSMUSG00000038014	ProperStrand	76	chr9	95689490	95689512	protein_coding	Pls1	intron	ENSMUSG00000049493	ProperStrand	6	1	-17.4615
chr16	20365903	20365993	protein_coding	Abcc5	exon	ENSMUSG00000022822	ProperStrand	30	chr11	69481368	69481458	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-4.4996
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr11	116938712	116938755	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-1.9361
chrX	83547356	83547372	protein_coding	Mageb4	intron	ENSMUSG00000035427	NonProperStrand	191	chr2	165633179	165633236	protein_coding	Zmynd8	exon	ENSMUSG00000039671	ProperStrand	81	1	-10.3874
chr15	98350146	98350183	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	chr11	51551280	51551336	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	2	-0.9129
chr11	118340575	118342604	protein_coding	Engase	exon	ENSMUSG00000033857	ProperStrand	12	chr19	42225881	42225897	protein_coding	Marveld1	utr3	ENSMUSG00000044345	NonProperStrand	112	1	-15.3487
chr4	155183887	155183967	LTR	RMER15	ERVL	chr4RMER15155183797	ProperStrand	1	chr4	155183750	155183840	protein_coding	Mrpl20	intron	ENSMUSG00000029066	NonProperStrand	1	1	-inf
chr19	39722283	39722300	protein_coding	Cyp2c67	intron	ENSMUSG00000062624	NonProperStrand	6	chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-12.6127
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr11	80571453	80571470	protein_coding	Myo1d	intron	ENSMUSG00000035441	NonProperStrand	24	1	-9.6418
chr3	27037478	27037517	protein_coding	Ect2	exon	ENSMUSG00000027699	ProperStrand	17	chr2	173412180	173412280	pseudogene	Ppp4r1l-ps	.	ENSMUSG00000055897	ProperStrand	9	1	-19.7748
chr5	124866265	124866335	protein_coding	Sbno1	intron	ENSMUSG00000038095	ProperStrand	134	chr7	29136535	29136635	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.1424
chr7	88529496	88529520	protein_coding	Cpeb1	intron	ENSMUSG00000025586	NonProperStrand	29	chr16	23111772	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.1494
chr3	103769846	103769867	pseudogene	A130049A11Rik	.	ENSMUSG00000089998	ProperStrand	5	chr11	69483181	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-7.3324
chr1	58566665	58566683	lincRNA	Gm15834	intron	ENSMUSG00000085054	NonProperStrand	22	chr16	23110510	23110575	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.2978
chr9	108594652	108594669	protein_coding	Prkar2a	utr5	ENSMUSG00000032601	ProperStrand	43	chr12	17552961	17552998	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-5.7404
chr2	146125209	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	chr9	15118246	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	3	-4.5429
chr17	6232006	6232022	protein_coding	Tulp4	exon	ENSMUSG00000034377	NonProperStrand	265	chr16	90386836	90386853	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	1	-9.2325
chr3	108190241	108190534	protein_coding	Psrc1	exon	ENSMUSG00000068744	ProperStrand	38	chr12	112779229	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	5	-19.5307
chr10	70541953	70541969	protein_coding	Bicc1	exon	ENSMUSG00000014329	ProperStrand	13	chr17	35087895	35087962	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	2	-13.2717
chr4	148524659	148524765	protein_coding	Pgd	utr3	ENSMUSG00000028961	ProperStrand	34	chr16	23111485	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.1231
chr11	20101471	20101587	protein_coding	Rab1	utr5	ENSMUSG00000020149	ProperStrand	32	chr2	26768410	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-6.8462
chr10	122217001	122217018	protein_coding	Ppm1h	intron	ENSMUSG00000034613	ProperStrand	51	chr11	6428065	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.4890
chr14	31998225	31998502	protein_coding	Nisch	exon	ENSMUSG00000021910	ProperStrand	125	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-4.4466
chr18	36695069	36695202	protein_coding	Slc4a9	exon	ENSMUSG00000024485	ProperStrand	13	chr1	55044242	55044788	protein_coding	Sf3b1	exon	ENSMUSG00000025982	ProperStrand	158	1	-14.4909
chr19	5662658	5662734	protein_coding	Sipa1	utr5	ENSMUSG00000056917	ProperStrand	14	chr7	109149271	109149287	protein_coding	Numa1	exon	ENSMUSG00000066306	NonProperStrand	171	1	-14.1765
chr4	134926614	134927796	protein_coding	A330049M08Rik	exon	ENSMUSG00000043924	ProperStrand	130	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-6.2074
chr9	56830488	56830548	protein_coding	Snupn	exon	ENSMUSG00000055334	ProperStrand	16	chr7	116663713	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-11.9525
chr5	31363897	31363987	protein_coding	Cad	exon	ENSMUSG00000013629	ProperStrand	260	chr11	116938557	116938637	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-3.3602
chr11	52174594	52187831	protein_coding	Vdac1	utr5	ENSMUSG00000020402	ProperStrand	107	chr19	12085566	12085609	tRNA	tRNA638-LeuTAA	.	674863	ProperStrand	9	2	-inf
chr7	34989062	34989131	protein_coding	Gpi1	exon	ENSMUSG00000036427	ProperStrand	288	chr5	115939534	115939612	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-4.7856
chr11	79878340	79878405	protein_coding	Crlf3	intron	ENSMUSG00000017561	ProperStrand	47	chr17	24857717	24857807	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.7154
chr3	88898992	88899368	protein_coding	Fdps	exon	ENSMUSG00000059743	ProperStrand	12	chr7	148634808	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-11.6281
chr7	148634701	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	chr4	132394296	132394450	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	2	-1.4469
chr1	155754579	155755013	protein_coding	Glul	exon	ENSMUSG00000026473	ProperStrand	54	chr5	130300415	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-7.0275
chr11	96679931	96680031	protein_coding	Nfe2l1	utr3	ENSMUSG00000038615	ProperStrand	118	chr15	79912134	79912175	protein_coding	Rpl3	exon	ENSMUSG00000060036	ProperStrand	8342	1	-2.3917
chr10	43272293	43272383	LINE	L1Md_F2	L1	chr10L1Md_F243271930	ProperStrand	1	chr14	34780895	34780975	protein_coding	Zfp488	utr3	ENSMUSG00000044519	NonProperStrand	39	1	-inf
chr17	27559700	27559717	protein_coding	Grm4	utr3	ENSMUSG00000063239	ProperStrand	147	chr9	120037969	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	2	-5.2350
chr8	113413122	113413585	protein_coding	Fuk	exon	ENSMUSG00000033703	ProperStrand	18	chr8	32260335	32260359	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-7.0098
chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	chr2	29591555	29592104	protein_coding	Rapgef1	exon	ENSMUSG00000039844	ProperStrand	58	1	-8.8970
chr2	29870052	29870105	protein_coding	Spna2	intron	ENSMUSG00000057738	ProperStrand	222	chr14	61398407	61398423	protein_coding	C1qtnf9	exon	ENSMUSG00000071347	ProperStrand	187	1	-8.4143
chr11	97091180	97093237	protein_coding	Npepps	exon	ENSMUSG00000001441	ProperStrand	30	chr16	23110460	23110550	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.7075
chr5	121886726	121887709	protein_coding	Naa25	exon	ENSMUSG00000042719	ProperStrand	95	chr11	97642952	97642973	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.7248
chr12	8755650	8755667	protein_coding	Pum2	exon	ENSMUSG00000020594	NonProperStrand	3	chr5	108334195	108334243	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-11.1157
chr11	102710529	102710589	protein_coding	Eftud2	exon	ENSMUSG00000020929	ProperStrand	86	chr15	76541224	76541240	protein_coding	Lrrc14	utr5	ENSMUSG00000033728	ProperStrand	52	1	-12.8786
chr4	43505656	43505823	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr18	42385429	42401711	protein_coding	Lars	exon	ENSMUSG00000024493	ProperStrand	69	11	-inf
chr13	58229520	58229628	protein_coding	Hnrnpa0	exon	ENSMUSG00000007836	ProperStrand	110	chr5	108336440	108336490	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-3.7319
chr14	70841150	70841183	protein_coding	Polr3d	exon	ENSMUSG00000000776	ProperStrand	16	chr16	91630295	91630395	protein_coding	Gart	exon	ENSMUSG00000022962	ProperStrand	200	1	-13.5863
chr14	14766115	14766133	antisense	Gm11100	.	ENSMUSG00000079357	NonProperStrand	5	chr11	51926792	51931576	protein_coding	Ppp2ca	exon	ENSMUSG00000020349	ProperStrand	22	1	-19.2349
chr13	9833562	9833661	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr8	107937595	107937632	protein_coding	Lrrc36	intron	ENSMUSG00000054320	ProperStrand	5	3	-19.1127
chr8	107783510	107783527	protein_coding	Tradd	exon	ENSMUSG00000031887	ProperStrand	23	chr7	29136575	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-10.0781
chr18	24050337	24050354	protein_coding	Mapre2	utr3	ENSMUSG00000024277	NonProperStrand	7	chr11	69483135	69483226	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-6.6014
chr2	90235302	90235350	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr16	37384897	37384913	protein_coding	Stxbp5l	utr5	ENSMUSG00000022829	ProperStrand	332	3	-4.3473
chr3	34549488	34549578	protein_coding	Sox2	exon	ENSMUSG00000074637	ProperStrand	299	chr10	39978331	39978411	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-2.4825
chr10	76753984	76754000	protein_coding	Adarb1	utr3	ENSMUSG00000020262	NonProperStrand	7	chr7	51655058	51655158	protein_coding	Syt3	utr3	ENSMUSG00000030731	ProperStrand	3	1	-inf
chr2	30675197	30675213	protein_coding	Mettl11a	exon	ENSMUSG00000026857	ProperStrand	51	chr4	131908809	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.4523
chr1	102076729	102076790	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	chr5	108336382	108336472	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	4	-6.0825
chr5	100855902	100855941	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr10	127569261	127569361	protein_coding	Rbms2	utr3	ENSMUSG00000040043	ProperStrand	26	1	-8.3130
chr17	26260680	26260697	protein_coding	Mrpl28	exon	ENSMUSG00000024181	ProperStrand	10	chr16	23110843	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.7978
chr4	55431686	55431705	lincRNA	Gm12505	exon	ENSMUSG00000087070	ProperStrand	447	chr3	108357255	108357447	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	2	-2.2040
chr3	65152966	65152983	antisense	A730090N16Rik	.	ENSMUSG00000090120	ProperStrand	14	chrY	167748	168066	protein_coding	Ube1y1	exon	ENSMUSG00000069053	ProperStrand	3	1	-inf
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr13	34436391	34436407	protein_coding	Slc22a23	utr5	ENSMUSG00000038267	NonProperStrand	21	1	-6.5250
chr2	25795011	25795101	protein_coding	Camsap1	exon	ENSMUSG00000026933	ProperStrand	27	chr4	131908361	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.7097
chr2	172270204	172270220	protein_coding	2410001C21Rik	exon	ENSMUSG00000027502	NonProperStrand	54	chrX	84483699	84483720	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-8.4600
chr2	153226941	153226988	protein_coding	Asxl1	exon	ENSMUSG00000042548	ProperStrand	76	chr16	23111695	23111785	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.5406
chr4	130305550	130305616	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	chr4	3762249	3762292	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	1	-6.1146
chr11	94161289	94162834	protein_coding	Luc7l3	exon	ENSMUSG00000020863	ProperStrand	38	chr4	131865891	131865944	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-4.4532
chr7	51505822	51505878	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	chr8	94192150	94192226	protein_coding	Fto	utr3	ENSMUSG00000055932	ProperStrand	34	1	-9.7585
chr3	137010858	137010876	protein_coding	Emcn	intron	ENSMUSG00000054690	NonProperStrand	3	chr9	120037898	120037955	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-10.9964
chr19	5799179	5799237	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr2	66385173	66385189	protein_coding	Scn9a	exon	ENSMUSG00000075316	ProperStrand	58	1	-7.6122
chr12	100434837	100453402	protein_coding	Foxn3	intron	ENSMUSG00000033713	ProperStrand	74	chr9	120037910	120038051	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	6	-21.0854
chr12	114089767	114089783	protein_coding	Gpr132	utr3	ENSMUSG00000021298	ProperStrand	7	chr5	108336378	108336468	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-9.2393
chr5	124282218	124282235	SINE	RSINE1	B4	chr5RSINE1124282118	NonProperStrand	2	chr5	130300419	130300516	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-9.6890
chr4	131399490	131399506	protein_coding	Mecr	exon	ENSMUSG00000028910	NonProperStrand	109	chr11	69481333	69481475	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-3.8768
chr5	74489236	74489326	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr8	72572443	72572523	protein_coding	Sugp1	exon	ENSMUSG00000011306	ProperStrand	20	1	-7.8145
chr2	180712032	180713904	protein_coding	Arfgap1	exon	ENSMUSG00000027575	ProperStrand	18	chr5	130300473	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.7422
chr16	17894461	17894477	protein_coding	Tssk1	exon	ENSMUSG00000041566	NonProperStrand	62	chr7	150717369	150717425	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-5.4427
chr8	73222669	73222685	protein_coding	Jund	utr5	ENSMUSG00000071076	ProperStrand	50	chr15	98350146	98350234	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-5.1134
chr9	15130903	15130939	snoRNA	ENSMUSG00000077394_snoU2_19	.	ENSMUSG00000077394	ProperStrand	96	chr18	33954887	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-4.6591
chr8	87619473	87619492	protein_coding	Man2b1	exon	ENSMUSG00000005142	ProperStrand	27	chr4	131908704	131908794	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-4.3923
chr7	24713726	24713742	protein_coding	Vmn1r179	exon	ENSMUSG00000046924	NonProperStrand	69	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-7.4608
chr4	134880967	134880991	protein_coding	Srrm1	exon	ENSMUSG00000028809	ProperStrand	142	chr9	15119631	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.2735
chr5	123973429	123973485	protein_coding-noncoding	Diablo	utr3	ENSMUSG00000029433	ProperStrand	3	chr2	120880121	120880138	protein_coding	Tgm5	intron	ENSMUSG00000053675	ProperStrand	9	1	-inf
chr13	115787259	115791750	protein_coding	Itga1	exon	ENSMUSG00000042284	ProperStrand	3	chr2	26493366	26493482	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-9.9740
chr4	137505386	137520945	protein_coding	Ece1	utr3	ENSMUSG00000057530	ProperStrand	982	chr18	35716701	35716829	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	16	-4.0899
chr15	98738244	98738324	protein_coding	Lmbr1l	intron	ENSMUSG00000022999	ProperStrand	8	chr8	73419678	73419768	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-7.0879
chr9	59518327	59518390	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr7	28959571	28959587	protein_coding	Fbl	exon	ENSMUSG00000046865	ProperStrand	52	1	-7.4638
chr4	124472660	124475105	protein_coding	Inpp5b	exon	ENSMUSG00000028894	ProperStrand	9	chr4	131908275	131908355	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.8019
chr13	29043775	29043792	protein_coding	Sox4	exon	ENSMUSG00000076431	ProperStrand	73	chr18	33954837	33954937	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-3.1483
chr4	43505733	43505823	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chrX	71472303	71472549	protein_coding	Flna	exon	ENSMUSG00000031328	ProperStrand	134	19	-20.3469
chrX	72352585	72353544	protein_coding	Dkc1	exon	ENSMUSG00000031403	ProperStrand	89	chr7	150901674	150901690	protein_coding	Osbpl5	utr5	ENSMUSG00000037606	NonProperStrand	7	1	-17.0061
chr5	74489215	74489267	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr9	21602970	21602986	protein_coding	Kank2	utr5	ENSMUSG00000032194	ProperStrand	196	1	-3.3739
chr19	56003755	56003771	protein_coding	Tcf7l2	intron	ENSMUSG00000024985	ProperStrand	103	chr10	23505219	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-1.2719
chr2	135820133	135824418	protein_coding	Plcb4	exon	ENSMUSG00000039943	NonProperStrand	57	chr7	148634701	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-4.0827
chr17	45707416	45707440	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr14	76372292	76372413	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	1	-2.6468
chr4	89422657	89422747	LINE	L1_Rod	L1	chr4L1_Rod89422560	ProperStrand	1	chr4	89422809	89422899	LTR	ORR1C2-int	MaLR	chr4ORR1C2-int89422725	ProperStrand	1	1	-inf
chr2	90235286	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	118520520	118527593	protein_coding	Fbxw8	exon	ENSMUSG00000032867	ProperStrand	61	1	-4.4311
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr10	39978351	39978485	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	6	-2.2358
chr8	113176863	113176880	protein_coding	Vac14	intron	ENSMUSG00000010936	ProperStrand	27	chr13	49779667	49779711	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	2	-13.7290
chr1	93263062	93263079	protein_coding	Fam132b	exon	ENSMUSG00000047443	NonProperStrand	98	chr8	32260329	32260433	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	4	-12.1924
chr1	35661259	35661281	LTR	MTE2b	MaLR	chr1MTE2b35661034	NonProperStrand	1	chr1	84692463	84692481	miRNA	Mir5126	.	ENSMUSG00000093254	ProperStrand	15	1	-inf
chr15	100046396	100046461	protein_coding	Dip2b	utr3	ENSMUSG00000023026	ProperStrand	48	chr7	116663640	116663696	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.9014
chr9	118446429	118468416	protein_coding	Golga4	exon	ENSMUSG00000038708	ProperStrand	95	chr16	23111372	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-1.4548
chr16	16927199	16927256	protein_coding	Ppm1f	utr3	ENSMUSG00000026181	ProperStrand	37	chr7	52381973	52382010	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-7.6765
chr8	91106344	91106360	protein_coding	Nkd1	intron	ENSMUSG00000031661	ProperStrand	57	chr1	162966813	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-6.3603
chr2	166888977	166889057	snoRNA	ENSMUSG00000077515_SNORD12	.	ENSMUSG00000077515	ProperStrand	191	chr7	116664794	116664884	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-0.8382
chr2	120978294	120980504	protein_coding	Adal	exon	ENSMUSG00000027259	NonProperStrand	1	chr7	29136549	29136639	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	NonProperStrand	27	1	-inf
chr8	13416896	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr4	132394323	132394416	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	2	-4.4440
chr6	6807262	6807278	antisense	Dlx6as1	.	ENSMUSG00000090063	NonProperStrand	2	chr16	23110940	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr9	104115132	104115222	protein_coding	Dnajc13	exon	ENSMUSG00000032560	ProperStrand	60	chr4	131908814	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-2.3640
chr8	12757419	12757437	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr5	75473198	75473215	protein_coding	Gsx2	utr3	ENSMUSG00000035946	ProperStrand	307	1	-5.3677
chr18	77871306	77871330	protein_coding	8030462N17Rik	intron	ENSMUSG00000047466	ProperStrand	17	chr12	17552950	17553030	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	4	-20.2151
chr9	54440683	54440699	protein_coding	Idh3a	intron	ENSMUSG00000032279	NonProperStrand	3	chr16	23111447	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-6.9982
chr15	81734345	81734388	protein_coding	Aco2	exon	ENSMUSG00000022477	ProperStrand	237	chr10	116785848	116785905	protein_coding	Cpsf6	utr3	ENSMUSG00000055531	ProperStrand	86	1	-9.8358
chr9	72380656	72380746	protein_coding	Rfx7	exon	ENSMUSG00000037674	ProperStrand	20	chr18	35716839	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.1514
chr7	148634701	148634772	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	chr8	87574135	87574175	snoRNA	ENSMUSG00000077527_SNORD41	.	ENSMUSG00000077527	ProperStrand	29	1	-5.3877
chrX	84483699	84483741	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr1	192712615	192712631	protein_coding	Rps6kc1	exon	ENSMUSG00000089872	ProperStrand	241	1	-5.5019
chr9	37235239	37235319	protein_coding	Robo3	intron	ENSMUSG00000032128	ProperStrand	3	chr1	30924993	30925083	protein_coding	Phf3	intron	ENSMUSG00000048874	NonProperStrand	3	1	-inf
chr2	91436261	91436335	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	chr5	74489621	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	9	-4.4089
chr5	111219431	111219458	protein_coding	Ulk1	exon	ENSMUSG00000029512	ProperStrand	92	chr3	68889138	68889238	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	6	-14.3759
chr9	36562448	36566309	protein_coding	Stt3a	exon	ENSMUSG00000032116	ProperStrand	31	chr2	26768386	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	2	-11.1553
chr8	28148412	28148470	protein_coding	Erlin2	utr3	ENSMUSG00000031483	ProperStrand	14	chr10	23505166	23505256	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-6.3221
chr8	127968570	127971473	protein_coding	Sipa1l2	exon	ENSMUSG00000001995	ProperStrand	37	chr4	131908688	131908718	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-3.5476
chr9	83488337	83490913	protein_coding	Sh3bgrl2	utr3	ENSMUSG00000032261	ProperStrand	21	chr10	110918549	110918629	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-5.4616
chr5	136673671	136673687	protein_coding	Prkrip1	exon	ENSMUSG00000039737	NonProperStrand	30	chr16	23111447	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.3326
chr2	26493426	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr15	82980208	82980226	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-0.8546
chr5	73465907	73466011	protein_coding	Fryl	exon	ENSMUSG00000070733	ProperStrand	173	chr11	97642952	97643008	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-1.8074
chr11	97025319	97043087	protein_coding	Kpnb1	exon	ENSMUSG00000001440	ProperStrand	197	chr1	162965999	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	3	-4.5628
chr12	111878119	111878388	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr6	115757995	115758085	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-1.2903
chr5	108948869	108948926	protein_coding	Cplx1	utr3	ENSMUSG00000033615	ProperStrand	5	chr11	69483136	69483194	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-17.4892
chr9	59519486	59519740	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr11	62416956	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	2	-1.6088
chr5	74489543	74489567	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr9	34838428	34838444	protein_coding	Kirrel3	intron	ENSMUSG00000032036	ProperStrand	11	1	-9.0454
chr2	90235286	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	148608847	148608864	protein_coding	Kif1b	utr3	ENSMUSG00000063077	NonProperStrand	19	1	-6.7268
chr7	52283804	52283894	protein_coding	Prr12	utr3	ENSMUSG00000046574	ProperStrand	86	chr9	120038564	120038644	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	4	-8.7651
chr7	25772563	25773037	protein_coding	Atp1a3	exon	ENSMUSG00000040907	ProperStrand	66	chr4	131908689	131908751	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.0969
chr14	48740841	48787911	protein_coding	Peli2	utr5	ENSMUSG00000021846	ProperStrand	9	chr4	131865434	131865459	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	6	-inf
chr11	76726329	76726348	protein_coding	Tmigd1	intron	ENSMUSG00000020839	NonProperStrand	1	chr5	108334195	108334240	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-inf
chr19	30199270	30206227	protein_coding	Gldc	exon	ENSMUSG00000024827	ProperStrand	175	chr14	33005144	33005234	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-2.0972
chr11	67798068	67798085	protein_coding	Stx8	exon	ENSMUSG00000020903	ProperStrand	21	chr11	120698116	120698132	protein_coding	Ccdc57	intron	ENSMUSG00000048445	NonProperStrand	5	1	-19.3637
chr18	38001289	38001341	protein_coding	Pcdhga9	utr3	ENSMUSG00000023036	ProperStrand	245	chr3	68889026	68889098	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-1.0229
chr2	90235313	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	25638699	25638715	protein_coding	Gpr37	exon	ENSMUSG00000039904	ProperStrand	49	1	-4.8520
chr3	89139230	89139293	protein_coding	Efna4	exon	ENSMUSG00000028040	ProperStrand	8	chr17	24856620	24856639	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-10.5400
chr2	22444727	22444817	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	chr4	116827121	116827184	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-1.8970
chr16	21142233	21142313	SINE	B1_Mus1	Alu	chr16B1_Mus121142190	ProperStrand	1	chr11	45828083	45828173	protein_coding	Sox30	intron	ENSMUSG00000040489	NonProperStrand	4	1	-inf
chr3	153575103	153575168	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	chr10	90644840	90644912	tRNA	tRNA856-AspGTC	.	110816	ProperStrand	65	5	-22.0845
chr4	95125259	95125339	LINE	L1Md_F3	L1	chr4L1Md_F395124668	ProperStrand	1	chr8	92714745	92714835	LINE	L1Md_F3	L1	chr8L1Md_F392714676	ProperStrand	1	1	-inf
chr7	118214192	118214208	protein_coding	Eif4g2	utr3	ENSMUSG00000005610	NonProperStrand	30	chr8	98269959	98270085	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	2	-11.1642
chr7	133436479	133436579	protein_coding	Sbk1	utr3	ENSMUSG00000042978	ProperStrand	24	chr11	62416600	62416653	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-6.9803
chr14	121682639	121682729	protein_coding	Farp1	utr3	ENSMUSG00000025555	ProperStrand	18	chr1	162966208	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-10.0092
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr4	41066011	41066296	protein_coding	Nol6	exon	ENSMUSG00000028430	ProperStrand	98	1	-7.3375
chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	3	-8.0257
chr2	25299119	25299310	protein_coding	Abca2	exon	ENSMUSG00000026944	ProperStrand	57	chr17	24857722	24857778	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.3832
chr9	20598396	20598412	protein_coding	Col5a3	exon	ENSMUSG00000004098	ProperStrand	47	chr11	106362304	106362337	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-6.3242
chr11	55296281	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	chr4	116827118	116827138	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	2	-1.6087
chr4	133843608	133843626	protein_coding	Pdik1l	utr5	ENSMUSG00000050890	NonProperStrand	4	chr11	6519810	6519931	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-13.6139
chr7	24779190	24779213	SINE	ID_B1	B4	chr7ID_B124779183	NonProperStrand	54	chr11	113513363	113513379	protein_coding	Cog1	exon	ENSMUSG00000018661	NonProperStrand	38	1	-14.4470
chrX	49500429	49500446	protein_coding	Gpc4	intron	ENSMUSG00000031119	NonProperStrand	2	chr12	85350481	85350499	protein_coding	Acot1	utr5	ENSMUSG00000072949	ProperStrand	72	1	-20.8599
chr5	63027290	63027307	protein_coding	Arap2	exon	ENSMUSG00000037999	NonProperStrand	3	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-14.5462
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr17	27898408	27898498	protein_coding	D17Wsu92e	intron	ENSMUSG00000056692	ProperStrand	61	4	-17.4849
chr8	87525135	87525238	protein_coding	Hook2	exon	ENSMUSG00000052566	ProperStrand	204	chr9	15119631	15119763	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-0.8167
chr9	104025683	104025701	protein_coding	Ccrl1	intron	ENSMUSG00000079355	ProperStrand	10	chr19	8798484	8798533	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-8.8233
chr11	13381910	13382000	LINE	L1_Mur3	L1	chr11L1_Mur313381839	NonProperStrand	1	chr11	13381656	13381746	LTR	ORR1C2	MaLR	chr11ORR1C213381667	NonProperStrand	1	1	-inf
chr9	71331091	71331191	protein_coding	Polr2m	exon	ENSMUSG00000032199	ProperStrand	83	chr4	131865390	131865448	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-3.4001
chr8	73914830	73914846	protein_coding	Ushbp1	exon	ENSMUSG00000034911	NonProperStrand	1	chr16	23110913	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
mmu-miR-5100	5	20	miRNA	mmu-miR-5100	.	mmu-miR-5100	ProperStrand	132	chr1	65315321	65315358	protein_coding	Pikfyve	exon	ENSMUSG00000025949	ProperStrand	59	1	-11.7640
chr11	62365988	62366088	protein_coding	Ubb	exon	ENSMUSG00000019505	ProperStrand	32	chr14	31827478	31827532	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-8.2029
chr3	95552013	95552480	protein_coding	Tars2	exon	ENSMUSG00000028107	ProperStrand	26	chr7	148634805	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	3	-13.1145
chr7	119934378	119934468	protein_coding	Tead1	intron	ENSMUSG00000055320	ProperStrand	217	chr2	91436225	91436308	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-4.9728
chr2	35576837	35576905	protein_coding	Dab2ip	exon	ENSMUSG00000026883	ProperStrand	93	chr11	77996560	77996595	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	2	-8.5942
chr7	116663125	116663434	protein_coding	Rpl27a	exon	ENSMUSG00000046364	ProperStrand	149	chr17	24857720	24857810	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-0.9559
chr17	6138911	6138928	protein_coding	Tulp4	exon	ENSMUSG00000034377	ProperStrand	164	chr11	33371411	33371511	protein_coding	Ranbp17	intron	ENSMUSG00000040594	ProperStrand	20	3	-19.6432
chr4	58127683	58127705	protein_coding	Svep1	intron	ENSMUSG00000028369	NonProperStrand	6	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-7.8657
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr3	68889076	68889241	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	4	-1.1278
chr11	69824509	69824525	protein_coding	Acadvl	exon	ENSMUSG00000018574	ProperStrand	19	chr10	61329160	61330213	protein_coding	Col13a1	exon	ENSMUSG00000058806	ProperStrand	120	1	-14.2621
chr11	58682475	58682491	protein_coding	2810021J22Rik	utr5	ENSMUSG00000020491	ProperStrand	162	chr17	95160909	95218242	protein_coding	2610044O15Rik	exon	ENSMUSG00000066057	NonProperStrand	70	1	-11.0102
chrX	11635848	11635865	protein_coding	Bcor	exon	ENSMUSG00000040363	NonProperStrand	293	chr5	112865459	112865476	protein_coding	Sez6l	exon	ENSMUSG00000058153	ProperStrand	81	1	-9.5325
chr10	68578219	68578238	LTR	MT2A	ERVL	chr10MT2A68577899	ProperStrand	21	chr14	51665445	51665466	LTR	MTEa	MaLR	chr14MTEa51665406	NonProperStrand	1	1	-inf
chr6	117341939	117341956	Low_complexity	GA-rich	Low_complexity	chr6GA-rich117341874	ProperStrand	5	chr15	101919062	101919120	protein_coding	Eif4b	exon	ENSMUSG00000058655	ProperStrand	484	1	-14.2933
chr10	39217942	39217959	protein_coding	Fyn	intron	ENSMUSG00000019843	NonProperStrand	17	chr11	62416577	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-7.6793
chr17	34749723	34749740	protein_coding	Agpat1	utr3	ENSMUSG00000034254	ProperStrand	28	chr18	35716763	35716875	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.5142
chr18	10052127	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr17	39985193	39985688	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	3	-5.0811
chr12	57633743	57633833	protein_coding	Nkx2-1	utr3	ENSMUSG00000001496	ProperStrand	1	chr7	123476690	123476770	snoRNA	ENSMUSG00000064741_Snord14a	.	ENSMUSG00000064741	ProperStrand	83	1	-inf
chr14	52914919	52919055	protein_coding	Mettl3	intron	ENSMUSG00000022160	ProperStrand	54	chr4	131865856	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-3.5200
chr18	35714262	35716761	lincRNA	Snhg4	intron	ENSMUSG00000090430	ProperStrand	270	chr3	82816757	82816774	protein_coding	Fgg	exon	ENSMUSG00000033860	NonProperStrand	321	2	-11.1823
chr11	69870769	69870785	protein_coding	Asgr1	exon	ENSMUSG00000020884	NonProperStrand	145	chr3	108357255	108357292	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-2.9085
chr8	12757418	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr9	64143796	64143879	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	3	-8.0878
chr10	25147698	25147746	protein_coding	Epb4.1l2	intron	ENSMUSG00000019978	ProperStrand	105	chr4	131865383	131865473	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-2.9764
chr8	93649954	93650102	protein_coding	Aktip	exon	ENSMUSG00000031667	ProperStrand	13	chr14	33005144	33005234	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-7.0085
chr8	41644281	41644371	protein_coding	Mtmr7	intron	ENSMUSG00000039431	ProperStrand	40	chr4	131865411	131865491	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	5	-20.5196
chr5	64301558	64301631	protein_coding	Rell1	utr3	ENSMUSG00000047881	ProperStrand	24	chr16	23110841	23110889	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-10.2127
chr9	44434472	44434529	protein_coding	Ddx6	exon	ENSMUSG00000032097	ProperStrand	59	chr10	80641724	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	1	-7.5817
chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	chr2	32818887	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	2	-2.7779
chr4	131826037	131826128	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	chr3	68889026	68889144	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	2	-0.8498
chr12	112779147	112779225	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	chr1	173041632	173041649	tRNA	tRNA710-ValCAC	.	1593026	ProperStrand	206	1	-2.5134
chr9	57253860	57253877	SINE	B1_Mm	Alu	chr9B1_Mm57253847	ProperStrand	39	chr3	97817679	97851651	protein_coding	Notch2	exon	ENSMUSG00000027878	ProperStrand	86	1	-13.4601
chr14	51479986	51480002	protein_coding	Tep1	intron	ENSMUSG00000006281	ProperStrand	37	chr7	117190016	117190045	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.2355
chr7	148075351	148076252	protein_coding	Psmd13	exon	ENSMUSG00000025487	ProperStrand	16	chr13	34436854	34436870	protein_coding	Slc22a23	utr5	ENSMUSG00000038267	ProperStrand	95	1	-15.0793
chr4	129192035	129192752	protein_coding	Marcksl1	exon	ENSMUSG00000047945	ProperStrand	52	chr4	131908265	131908388	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-4.7133
chr17	47605301	47605317	protein_coding	AI661453	exon	ENSMUSG00000034382	NonProperStrand	38	chr9	120038467	120038491	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.8790
chr19	8799052	8799093	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	chr16	43886799	43886850	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	3	-3.6997
chr16	35984149	35984166	protein_coding	Kpna1	intron	ENSMUSG00000022905	ProperStrand	38	chr6	144977349	144977397	protein_coding	Bcat1	intron	ENSMUSG00000030268	ProperStrand	49	1	-14.6608
chr11	48615175	48615194	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	chr4	83195624	83195640	protein_coding	4930473A06Rik	exon	ENSMUSG00000052407	ProperStrand	19	1	-12.1297
chr11	78791269	78791286	protein_coding	Lgals9	intron	ENSMUSG00000001123	ProperStrand	6	chr15	34370545	34370636	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-8.1636
chr4	131865856	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr11	69482352	69482498	snoRNA	ENSMUSG00000089542_snoU6-77	.	ENSMUSG00000089542	ProperStrand	138	8	-9.6700
chr11	11925593	11925611	protein_coding	Grb10	intron	ENSMUSG00000020176	NonProperStrand	159	chr5	118517192	118517253	protein_coding	Fbxw8	utr3	ENSMUSG00000032867	ProperStrand	61	1	-11.3240
chr2	73747420	73747975	protein_coding	Atp5g3	exon	ENSMUSG00000018770	ProperStrand	41	chr7	52382753	52382786	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-7.5109
chr5	54046226	54046290	protein_coding	Rbpj	utr3	ENSMUSG00000039191	ProperStrand	96	chr7	29136585	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.6132
chr18	42683787	42683877	protein_coding	Tcerg1	exon	ENSMUSG00000024498	ProperStrand	210	chr11	6428042	6428122	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.1759
chr10	92674563	92674628	protein_coding	Cdk17	intron	ENSMUSG00000020015	ProperStrand	21	chr9	59526808	59526868	protein_coding	Pkm2	utr3	ENSMUSG00000032294	ProperStrand	1296	4	-inf
chr1	4883566	4885026	protein_coding	Tcea1	exon	ENSMUSG00000033813	ProperStrand	24	chr1	89673689	89673769	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-5.0005
chr10	114837960	114838729	protein_coding	Zfc3h1	utr5	ENSMUSG00000034163	ProperStrand	58	chr17	35299565	35299633	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-4.8426
chrX	143498405	143498421	protein_coding	Htr2c	intron	ENSMUSG00000041380	NonProperStrand	1	chr11	106362557	106362630	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-inf
chr8	24522013	24522113	protein_coding	Sfrp1	utr5	ENSMUSG00000031548	ProperStrand	22	chr4	131865908	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.5019
chr11	55296195	55296335	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	chr19	8963027	8963180	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	19	-0.7271
chr5	135422422	135422501	protein_coding	Cldn4	exon	ENSMUSG00000047501	NonProperStrand	4	chr9	120039557	120039647	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	NonProperStrand	24	2	-22.7098
chr4	124477109	124477952	protein_coding	Inpp5b	exon	ENSMUSG00000028894	ProperStrand	9	chr15	34370545	34370639	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-7.2969
chr5	108333580	108333646	snoRNA	ENSMUSG00000064453_Snord21	.	ENSMUSG00000064453	ProperStrand	201	chr11	68886951	68887025	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	7	-14.8601
chr11	87202018	87202074	protein_coding	Rad51c	intron	ENSMUSG00000007646	ProperStrand	6	chr3	145601279	145601865	protein_coding	2410004B18Rik	exon	ENSMUSG00000036873	ProperStrand	10	2	-19.0755
chr11	101320385	101320448	protein_coding	Vat1	utr3	ENSMUSG00000034993	ProperStrand	69	chr17	35089182	35089233	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-5.2128
chr11	4579330	4579451	protein_coding	Ascc2	exon	ENSMUSG00000020412	ProperStrand	27	chr16	23110911	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.3280
chr10	41439072	41439167	protein_coding	Cep57l1	utr3	ENSMUSG00000019813	ProperStrand	36	chr15	34370545	34370579	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	3	-10.8489
chr6	70794801	70794819	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chr9	120039545	120039657	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.7213
chr15	34370545	34370609	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	chr13	23609091	23609152	tRNA	tRNA110-GlyGCC	.	491177	ProperStrand	12	4	-21.5942
chr7	152049755	152050243	protein_coding	Fgf4	utr3	ENSMUSG00000050917	ProperStrand	66	chr10	23505152	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-6.7357
chr1	167772681	167772702	protein_coding	Cd247	intron	ENSMUSG00000005763	NonProperStrand	4	chr16	23110544	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-7.8518
chr19	37258097	37258169	protein_coding	Cpeb3	intron	ENSMUSG00000039652	ProperStrand	8	chr5	108334194	108334284	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-8.8896
chr6	88698555	88698573	protein_coding	Mgll	intron	ENSMUSG00000033174	ProperStrand	10	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-12.5911
chr15	74392750	74392768	protein_coding	Bai1	intron	ENSMUSG00000034730	NonProperStrand	56	chr18	33954816	33954921	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-3.6330
chr7	105241584	105241690	protein_coding	Myo7a	intron	ENSMUSG00000030761	NonProperStrand	33	chr7	52713341	52713442	protein_coding	Ftl1	utr3	ENSMUSG00000050708	ProperStrand	807	5	-19.4352
chr8	124963296	124963357	protein_coding	Mvd	exon	ENSMUSG00000006517	ProperStrand	13	chr4	131865929	131865978	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.5141
chr12	33661169	33661238	protein_coding	Sypl	utr3	ENSMUSG00000020570	ProperStrand	18	chr17	24856620	24856673	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-8.8482
chr6	93127321	93127338	lincRNA	9530026P05Rik	intron	ENSMUSG00000087573	ProperStrand	51	mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	1	-6.2240
chr11	101295263	101295300	protein_coding	Rundc1	exon	ENSMUSG00000035007	ProperStrand	6	chr10	23505166	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-18.1125
chr9	84692879	84692895	SINE	RSINE1	B4	chr9RSINE184692792	NonProperStrand	1	chr10	77432751	77432770	protein_coding	Trpm2	intron	ENSMUSG00000009292	NonProperStrand	23	1	-inf
chr17	24646061	24646115	protein_coding	Traf7	utr3	ENSMUSG00000052752	ProperStrand	28	chr19	43269721	43269737	protein_coding	Hpse2	intron	ENSMUSG00000074852	NonProperStrand	48	1	-15.2947
chr13	38079609	38079628	protein_coding	Ssr1	exon	ENSMUSG00000021427	ProperStrand	65	chr4	116862547	116862662	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	5	-19.7912
chr17	13184989	13185013	protein_coding	Wtap	utr5	ENSMUSG00000060475	ProperStrand	119	chr16	23111777	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-0.9346
chr13	19684241	19684257	protein_coding	Epdr1	utr3	ENSMUSG00000002808	ProperStrand	46	chr4	131865885	131865989	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.1947
chr18	24777600	24777893	protein_coding	Elp2	exon	ENSMUSG00000024271	ProperStrand	46	chr13	51743581	51743661	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-7.3894
chr18	38412605	38413647	protein_coding	0610009O20Rik	exon	ENSMUSG00000024442	ProperStrand	25	chr3	130429856	130431692	protein_coding	Rpl34	exon	ENSMUSG00000062006	ProperStrand	51	1	-15.4245
chr17	23957898	23957953	protein_coding	Srrm2	utr3	ENSMUSG00000039218	ProperStrand	521	chr5	116071701	116071718	protein_coding	Gcn1l1	exon	ENSMUSG00000041638	ProperStrand	408	1	-5.2002
chr19	23332023	23332040	protein_coding	Smc5	exon	ENSMUSG00000024943	ProperStrand	146	chr7	52714027	52714553	protein_coding	Ftl1	exon	ENSMUSG00000050708	ProperStrand	807	1	-6.3519
chr2	105012751	105012769	protein_coding	Wt1	utr3	ENSMUSG00000016458	NonProperStrand	338	chr14	33005094	33005139	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-1.1240
chr2	166699020	166699038	protein_coding	Arfgef2	intron	ENSMUSG00000074582	NonProperStrand	7	chr16	23111372	23111429	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-5.0992
chr8	3803240	3803330	misc_RNA	RNaseP_nuc	.	ENSMUSG00000088025	ProperStrand	328	chr10	110918553	110918633	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-0.8010
chr7	80646858	80646922	protein_coding	Chd2	exon	ENSMUSG00000078671	ProperStrand	69	chr2	158185530	158185622	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-6.2098
chr10	23506278	23506342	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	chr17	24856620	24856720	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	2	-1.7656
chr18	9995271	9995312	protein_coding	Thoc1	utr3	ENSMUSG00000024287	NonProperStrand	5	chr7	29136525	29136563	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	4	-18.8884
chr9	120039532	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	chr8	113362430	113362493	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	6	-4.7976
chr5	123622050	123622066	protein_coding	Hpd	exon	ENSMUSG00000029445	ProperStrand	254	chr5	145532347	145532393	protein_coding	Trrap	intron	ENSMUSG00000045482	ProperStrand	399	1	-6.6461
chr17	23742912	23746246	protein_coding	Zscan10	exon	ENSMUSG00000023902	ProperStrand	9	chr19	8799830	8799881	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	3	-19.0401
chr15	11313723	11313823	protein_coding	Tars	utr3	ENSMUSG00000022241	ProperStrand	121	chr4	126290538	126290556	protein_coding	5730409E04Rik	utr3	ENSMUSG00000073755	NonProperStrand	2	1	-19.1467
chrX	130121673	130121689	protein_coding	Pcdh19	utr3	ENSMUSG00000051323	NonProperStrand	2	chr3	68889027	68889086	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-10.5388
chr5	31498360	31498610	protein_coding	Snx17	exon	ENSMUSG00000029146	ProperStrand	5	chr17	24857763	24857794	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-7.1522
chr12	87796883	87796917	protein_coding	Esrrb	intron	ENSMUSG00000021255	NonProperStrand	14	chr16	88154019	88154036	protein_coding	Grik1	intron	ENSMUSG00000022935	NonProperStrand	20	1	-18.9819
chr15	3939655	3939682	protein_coding	AW549877	exon	ENSMUSG00000041935	ProperStrand	17	chr18	35714146	35714236	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-9.6425
chr13	42250793	42250893	protein_coding	Hivep1	exon	ENSMUSG00000021366	ProperStrand	24	chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	1	-11.4328
chrX	71612778	71612811	protein_coding	Ubl4	utr3	ENSMUSG00000015290	ProperStrand	16	chr11	6428107	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-9.4247
chr7	150399032	150399049	protein_coding	Kcnq1	intron	ENSMUSG00000009545	NonProperStrand	133	chr7	116663718	116663756	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-2.4287
chr5	129526638	129526755	protein_coding	Ran	exon	ENSMUSG00000029430	ProperStrand	82	chr9	53033613	53037235	protein_coding	Ddx10	exon	ENSMUSG00000053289	ProperStrand	40	5	-inf
chr6	145564547	145564563	protein_coding	Tuba3b	utr5	ENSMUSG00000067338	ProperStrand	152	chr1	59761104	59761162	snoRNA	ENSMUSG00000089512_SNORD11	.	ENSMUSG00000089512	ProperStrand	43	1	-12.1197
chr2	90235287	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	113166898	113166916	protein_coding	Myo18b	intron	ENSMUSG00000072720	NonProperStrand	2	1	-11.8388
chr4	134469106	134470904	protein_coding	Tmem50a	utr5	ENSMUSG00000028822	ProperStrand	8	chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-11.9900
chr5	115573550	115573571	protein_coding	Unc119b	utr3	ENSMUSG00000046562	ProperStrand	20	chr4	131908687	131908753	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.0012
chr6	56051505	56051521	protein_coding	Pde1c	utr3	ENSMUSG00000004347	ProperStrand	31	chr4	131908689	131908789	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.2342
chr11	116332756	116332784	protein_coding	Prpsap1	exon	ENSMUSG00000015869	ProperStrand	7	chr17	35295076	35295401	protein_coding	Prrc2a	exon	ENSMUSG00000024393	ProperStrand	315	1	-14.4156
chr10	61932797	61943311	protein_coding	Vps26a	exon	ENSMUSG00000020078	ProperStrand	15	chr4	131908814	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-6.0926
chr13	54723202	54723218	protein_coding	Faf2	exon	ENSMUSG00000025873	ProperStrand	90	chr2	26494729	26494759	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.3986
chr5	87680856	87680872	protein_coding	Ugt2b37	exon	ENSMUSG00000057425	NonProperStrand	30	chr1	162965980	162965999	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-4.9227
chr11	5180669	5180685	protein_coding	Znrf3	utr3	ENSMUSG00000041961	NonProperStrand	210	chrX	84483699	84483717	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-5.7699
chr2	181423761	181423782	protein_coding	Rgs19	utr3	ENSMUSG00000002458	NonProperStrand	10	chr2	144087322	144087449	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-10.1870
chr4	86565211	86565235	protein_coding	Acer2	utr3	ENSMUSG00000038007	ProperStrand	8	chr15	81524828	81524845	protein_coding	Chadl	exon	ENSMUSG00000063765	ProperStrand	28	1	-18.2008
chr11	116535952	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr6	87955025	87955096	protein_coding	Rab7	exon	ENSMUSG00000079477	ProperStrand	33	4	-19.3149
chr2	121949510	121949527	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	chr7	117189955	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	7	-9.5558
chr12	102150994	102206050	protein_coding	Ccdc88c	exon	ENSMUSG00000021182	ProperStrand	151	chr16	23110913	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	7	-1.2670
chr6	122268319	122268337	protein_coding	Phc1	utr3	ENSMUSG00000040669	NonProperStrand	31	chr1	145626114	145626192	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	2	-16.0225
chr9	110100258	110100289	protein_coding	Smarcc1	exon	ENSMUSG00000032481	ProperStrand	108	chr2	26493366	26493484	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	4	-9.4840
chrX	71589885	71589904	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr17	24857717	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	6	-4.0965
chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	chr4	117317815	117317927	protein_coding	Eri3	intron	ENSMUSG00000033423	ProperStrand	246	5	-19.4317
chr9	65323769	65328249	protein_coding	Spg21	exon	ENSMUSG00000032388	ProperStrand	5	chr7	106628075	106628133	snoRNA	ENSMUSG00000064966_Snord15b	.	ENSMUSG00000064966	ProperStrand	74	1	-17.8240
chr5	151992523	151992539	protein_coding	Stard13	exon	ENSMUSG00000016128	NonProperStrand	9	chr8	73419702	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-6.8403
chr4	131908373	131908463	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr10	127521199	127521274	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	1	-2.9426
chr2	90235290	90235325	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr15	82160425	82160475	protein_coding	Naga	utr3	ENSMUSG00000022453	ProperStrand	5	1	-9.5409
chr12	83222847	83222937	LTR	RMER17C	ERVK	chr12RMER17C83222567	ProperStrand	1	chr18	57214536	57214616	LTR	RMER17C	ERVK	chr18RMER17C57214327	ProperStrand	1	1	-inf
chr10	122002974	122003064	LINE	L1Md_F2	L1	chr10L1Md_F2122002095	ProperStrand	17	chrX	116724126	116724216	LINE	Lx2	L1	chrXLx2116724086	ProperStrand	1	1	-inf
chr15	85966820	85966857	protein_coding	Gramd4	utr3	ENSMUSG00000035900	ProperStrand	39	chr18	35716809	35716865	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-7.5184
chr16	36075547	36075618	protein_coding	Ccdc58	intron	ENSMUSG00000075229	ProperStrand	18	chr11	62416970	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	5	-inf
chr6	136769786	136769876	protein_coding	Wbp11	exon	ENSMUSG00000030216	ProperStrand	87	chr7	116664811	116664891	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	6	-12.1220
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr11	77996559	77996624	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	2	-0.9331
chr15	6710961	6711012	protein_coding	Rictor	intron	ENSMUSG00000050310	ProperStrand	21	chr11	97642953	97643007	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.3990
chr2	71265428	71265521	protein_coding	Hat1	intron	ENSMUSG00000027018	ProperStrand	53	chr8	111238940	111238956	protein_coding	Zfhx3	utr5	ENSMUSG00000038872	ProperStrand	65	1	-13.4036
chrX	148343271	148343318	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	chr5	135421397	135421413	protein_coding	Cldn4	utr3	ENSMUSG00000047501	ProperStrand	12	1	-12.3460
chr16	32679909	32679951	protein_coding	Tnk2	exon	ENSMUSG00000022791	ProperStrand	86	chr5	130300495	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.9146
chr4	132440238	132440255	protein_coding	Stx12	exon	ENSMUSG00000028879	NonProperStrand	1	chr1	59761672	59761716	snoRNA	ENSMUSG00000089093_Snord11	.	ENSMUSG00000089093	ProperStrand	193	1	-inf
chr1	155109739	155179281	protein_coding	Lamc1	exon	ENSMUSG00000026478	ProperStrand	239	chr3	123210854	123210981	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	4	-2.2841
chr4	64785559	64785575	protein_coding	Pappa	utr5	ENSMUSG00000028370	ProperStrand	65	chr4	131908243	131908298	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.3054
chr18	3424494	3424534	protein_coding	Cul2	exon	ENSMUSG00000024231	ProperStrand	16	chr16	20684311	20684388	snoRNA	ENSMUSG00000077239_Snord66	.	ENSMUSG00000077239	ProperStrand	159	4	-inf
chr19	5493645	5493735	protein_coding	Cfl1	utr3	ENSMUSG00000056201	ProperStrand	88	chrX	34622930	34623010	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-2.4973
chr5	138052279	138052369	protein_coding	Pcolce	intron	ENSMUSG00000029718	ProperStrand	63	chr11	97643008	97643037	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	10	-inf
chr4	32106647	32106676	protein_coding	Map3k7	utr3	ENSMUSG00000028284	ProperStrand	16	chr11	69481384	69481474	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.7383
chr10	23505158	23505238	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	NonProperStrand	45	chr11	69483192	69483282	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	NonProperStrand	35	2	-23.5236
chr4	21877893	21877973	protein_coding-noncoding	6230409E13Rik	utr5	ENSMUSG00000028246	ProperStrand	18	chr4	21877992	21878082	protein_coding	6230409E13Rik	intron	ENSMUSG00000028246	ProperStrand	3	1	-inf
chr5	108334238	108336486	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	chr12	92811919	92812009	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	1	-0.8700
chr2	145077956	145209253	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	chr16	23109048	23109090	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-2.0490
chr12	3968611	3968627	protein_coding	Efr3b	exon	ENSMUSG00000020658	ProperStrand	142	chr19	8800085	8800130	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-5.9044
chr5	114297569	114298636	protein_coding	Coro1c	exon	ENSMUSG00000004530	ProperStrand	44	chr17	88077661	88077677	protein_coding	Msh2	exon	ENSMUSG00000024151	ProperStrand	124	1	-12.4825
chr17	46861595	46861611	protein_coding	Pex6	exon	ENSMUSG00000002763	ProperStrand	292	chr17	35647495	35647523	protein_coding	Pou5f1	utr3	ENSMUSG00000024406	ProperStrand	104	1	-9.0390
chr1	99971952	99971995	protein_coding	Pam	intron	ENSMUSG00000026335	ProperStrand	7	chr4	131865878	131865978	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.7768
chr11	60214618	60214646	protein_coding	Atpaf2	utr3	ENSMUSG00000042709	ProperStrand	12	chr4	131908236	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-7.1809
chr8	123196720	123197138	protein_coding	Cox4i1	exon	ENSMUSG00000031818	ProperStrand	31	chr3	108357410	108357490	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-5.8273
chr15	35547396	35547475	protein_coding	Vps13b	exon	ENSMUSG00000037646	ProperStrand	56	chr9	120038553	120038643	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.1631
chr9	101004378	101004468	protein_coding	Msl2	exon	ENSMUSG00000066415	ProperStrand	9	chr2	32818859	32818939	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-9.3121
chr18	34646697	34646787	protein_coding	Fam13b	exon	ENSMUSG00000036501	ProperStrand	30	chr4	56910540	56910620	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	12	-inf
chr6	31476695	31478468	protein_coding	Podxl	exon	ENSMUSG00000025608	ProperStrand	37	chr10	23506278	23506347	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-7.9134
chr10	42576608	42576635	LTR	ORR1A3	MaLR	chr10ORR1A342576615	ProperStrand	14	chr6	122682318	122682446	protein_coding	Slc2a3	intron	ENSMUSG00000003153	ProperStrand	682	1	-11.4082
chr15	82963650	82963750	protein_coding	Poldip3	exon	ENSMUSG00000041815	ProperStrand	57	chr16	23111445	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.3302
chr13	13024602	13024692	LINE	Lx	L1	chr13Lx13024563	NonProperStrand	1	chr13	13024248	13024338	LTR	RLTR46	ERVK	chr13RLTR4613024249	ProperStrand	1	1	-inf
chr6	94776850	94776875	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	chr19	8799830	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	2	-2.4653
chrX	71518315	71518351	protein_coding	Rpl10	exon	ENSMUSG00000008682	ProperStrand	71	chr7	107463024	107463041	protein_coding	P4ha3	intron	ENSMUSG00000051048	NonProperStrand	29	1	-14.4501
chr12	110892838	110892866	snoRNA	ENSMUSG00000064621_AF357355	.	ENSMUSG00000064621	ProperStrand	60	chr11	69481387	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	3	-8.0928
chr16	8620416	8620455	protein_coding	Abat	utr3	ENSMUSG00000057880	ProperStrand	7	chr4	56910493	56910593	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-10.5007
chr3	54497021	54519092	protein_coding	Fam48a	exon	ENSMUSG00000027751	ProperStrand	16	chr10	23505152	23505236	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-5.9181
chr8	86187819	86187835	protein_coding	Gipc1	exon	ENSMUSG00000019433	ProperStrand	60	chr18	35716808	35716845	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.1696
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr9	99483993	99484009	protein_coding	Dbr1	exon	ENSMUSG00000032469	ProperStrand	162	1	-6.6180
chr4	61966217	61966253	protein_coding	Fkbp15	exon	ENSMUSG00000066151	ProperStrand	10	chr18	35714149	35714239	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-6.9619
chr4	140591158	140591199	protein_coding	Crocc	exon	ENSMUSG00000040860	ProperStrand	44	chr11	33550383	33550402	protein_coding	Kcnip1	intron	ENSMUSG00000053519	ProperStrand	45	1	-14.5228
chr1	182930025	182931992	protein_coding	Ephx1	exon	ENSMUSG00000038776	ProperStrand	26	chr4	131908810	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-6.7721
chr12	112779147	112779165	protein_coding	Eif5	intron	ENSMUSG00000021282	ProperStrand	125	chr6	97129016	97129042	protein_coding	Tmf1	utr5	ENSMUSG00000030059	ProperStrand	33	1	-13.0460
chr11	77996308	77996398	protein_coding	Rpl23a	exon	ENSMUSG00000058546	ProperStrand	121	chr7	116663634	116663714	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.4014
chr7	52958453	52958469	protein_coding	Car11	exon	ENSMUSG00000003273	NonProperStrand	250	chr4	116828379	116828428	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-5.5608
chr19	7095523	7095620	protein_coding	Stip1	utr3	ENSMUSG00000024966	ProperStrand	100	chr19	8800441	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	5	-11.9758
chr5	148113281	148113297	protein_coding	Cdx2	utr3	ENSMUSG00000029646	ProperStrand	276	chr18	75161533	75161567	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-4.2314
chr2	38446300	38446352	protein_coding	Psmb7	exon	ENSMUSG00000026750	ProperStrand	18	chr9	15118332	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	3	-13.5645
chr4	46481641	46482826	protein_coding	Anp32b	exon	ENSMUSG00000028333	ProperStrand	229	chr10	90581039	90581119	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-2.3620
chr7	29845005	29845021	protein_coding	Ryr1	exon	ENSMUSG00000030592	ProperStrand	27	chr10	60692417	60692433	protein_coding	Adamts14	exon	ENSMUSG00000059901	NonProperStrand	127	1	-13.4261
chr17	24856737	24856753	antisense	Snhg9	.	ENSMUSG00000090101	ProperStrand	218	chr5	130300460	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	6	-6.2828
chr7	13508344	13508387	protein_coding	Rps5	exon	ENSMUSG00000012848	ProperStrand	108	chr18	35716698	35716881	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	6	-9.2899
chr15	82980088	82980188	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr4	116827794	116827849	snoRNA	ENSMUSG00000064751_SNORD46	.	ENSMUSG00000064751	ProperStrand	132	1	-5.5855
chr1	75211751	75211818	protein_coding	Tuba4a	utr3	ENSMUSG00000026202	ProperStrand	20	chr16	23110986	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-6.8326
chr10	126532147	126532163	protein_coding	Os9	utr3	ENSMUSG00000040462	NonProperStrand	28	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.6314
chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	chr14	52829460	52829569	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	2	-9.2707
chr2	3371495	3371574	protein_coding	Dclre1c	intron	ENSMUSG00000026648	NonProperStrand	4	chr17	28845400	28845490	protein_coding	Mapk14	intron	ENSMUSG00000053436	ProperStrand	40	1	-19.1548
chr10	127527107	127527187	protein_coding	Atp5b	utr3	ENSMUSG00000025393	ProperStrand	612	chr7	31740202	31740388	protein_coding	Usf2	exon	ENSMUSG00000058239	ProperStrand	8	1	-12.8005
chr16	31300265	31300348	protein_coding	Apod	intron	ENSMUSG00000022548	ProperStrand	10	chr1	161270526	161270555	snoRNA	ENSMUSG00000089536_Scarna3a	.	ENSMUSG00000089536	ProperStrand	247	4	-20.6535
chr1	102076758	102076799	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	chr10	23505150	23505279	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	7	-0.7610
chr2	90235315	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chrX	117040899	117041451	protein_coding	Pabpc5	utr5	ENSMUSG00000034732	NonProperStrand	24	1	-6.2570
chr9	78052729	78052829	protein_coding	Gsta4	intron	ENSMUSG00000032348	ProperStrand	82	chr2	130103783	130103825	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-7.8473
chr1	3705947	3706027	LINE	Lx5	L1	chr1Lx53704641	NonProperStrand	1	chr1	3711536	3711626	LINE	Lx5	L1	chr1Lx53711314	NonProperStrand	1	1	-inf
chr19	23105003	23105090	LTR	RMER17C	ERVK	chr19RMER17C23104920	NonProperStrand	6	chr16	23110987	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-inf
chr3	107921372	107926555	protein_coding	Gnai3	exon	ENSMUSG00000000001	ProperStrand	48	chr1	162968214	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	6	-20.5837
chr6	142713118	142713158	protein_coding	Cmas	exon	ENSMUSG00000030282	ProperStrand	14	chr1	162965533	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-9.9854
chr2	174102387	174102483	LINE	L1M4	L1	chr2L1M4174102239	ProperStrand	2	chr18	35716850	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-inf
chr2	90235315	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr12	30684759	30684775	protein_coding	Pxdn	exon	ENSMUSG00000020674	NonProperStrand	16	1	-7.0757
chr17	75790277	75790293	protein_coding	Ltbp1	utr3	ENSMUSG00000001870	NonProperStrand	66	chr16	23110527	23110563	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.3006
chr5	109124122	109132306	protein_coding	Fgfrl1	exon	ENSMUSG00000008090	ProperStrand	111	chr3	9609963	9609998	protein_coding	Zfp704	utr5	ENSMUSG00000040209	ProperStrand	67	1	-11.8560
chrY	581857	581874	protein_coding	Uty	exon	ENSMUSG00000068457	ProperStrand	26	chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	1	-13.1272
chr4	56785303	56788462	protein_coding	Ikbkap	exon	ENSMUSG00000028431	ProperStrand	44	chr4	131865856	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-8.4549
chr11	6520375	6520444	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	chr14	76372309	76372399	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	1	-3.5367
chr5	134834416	134834432	protein_coding	Gtf2ird1	intron	ENSMUSG00000023079	ProperStrand	85	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.2579
chr6	136804001	136804022	protein_coding	Art4	intron	ENSMUSG00000030217	NonProperStrand	5	chr5	135857815	135857905	protein_coding	Pom121	exon	ENSMUSG00000053293	ProperStrand	127	3	-inf
chr4	43505656	43505723	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr7	118215588	118215604	protein_coding	Eif4g2	utr3	ENSMUSG00000005610	ProperStrand	134	3	-4.8815
chr18	46769511	46769549	protein_coding	Eif1a	utr3	ENSMUSG00000057561	ProperStrand	44	chrX	113862541	113862569	snoRNA	ENSMUSG00000088518_SNORA9	.	ENSMUSG00000088518	ProperStrand	280	1	-10.8508
chr16	23111773	23111883	protein_coding	Eif4a2	intron	ENSMUSG00000022884	ProperStrand	356	chr10	80641963	80642099	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	7	-18.0859
chr17	21694170	21694217	protein_coding	Zfp52	exon	ENSMUSG00000051341	ProperStrand	3	chr18	35714144	35714234	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-16.1449
chr3	142351261	142351279	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr6	8206111	8206127	protein_coding	Rpa3	utr3	ENSMUSG00000012483	ProperStrand	13	1	-10.9018
chr5	74489203	74489586	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	19	-19.4267
chr15	79585216	79585232	lincRNA	Gm16576	exon	ENSMUSG00000087543	NonProperStrand	55	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-6.0390
chr12	17285671	17286386	protein_coding	Pdia6	exon	ENSMUSG00000020571	ProperStrand	114	chr9	15119699	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-4.5831
chr12	17552949	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr15	79908929	79909021	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	9	-2.4860
chr3	137849424	137849440	protein_coding	4930579F01Rik	utr5	ENSMUSG00000012042	NonProperStrand	156	chr14	76247711	76247753	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-2.4457
chrX	34667269	34667285	protein_coding	Nkap	exon	ENSMUSG00000016409	NonProperStrand	133	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-8.8333
chr9	26440743	26440759	DNA	MER5A	MER1_type	chr9MER5A26440741	ProperStrand	108	chr14	35662323	35662343	protein_coding	Grid1	intron	ENSMUSG00000041078	ProperStrand	12	1	-15.4202
chr5	138730427	138730517	protein_coding	Stag3	exon	ENSMUSG00000036928	ProperStrand	53	chr8	98269967	98270047	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-5.7847
chr10	99940556	99940593	protein_coding	Tmtc3	exon	ENSMUSG00000036676	ProperStrand	53	chr2	25079741	25080089	protein_coding	Tubb4b	exon	ENSMUSG00000036752	ProperStrand	58	1	-13.6338
chr9	88359537	88374467	protein_coding	Syncrip	exon	ENSMUSG00000032423	ProperStrand	35	chr7	116664809	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	4	-11.8399
chr12	34735983	34736000	protein_coding	Hdac9	utr3	ENSMUSG00000004698	ProperStrand	41	chr13	53285957	53285977	protein_coding	Ror2	intron	ENSMUSG00000021464	ProperStrand	46	1	-14.6315
chr2	90235290	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	24857331	24857371	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	2	-2.5192
chr13	43575807	43575897	protein_coding	Ranbp9	exon	ENSMUSG00000038546	ProperStrand	39	chr18	35714144	35714224	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	27	-20.1888
chr13	23844571	23844658	protein_coding	Hist1h3b	exon	ENSMUSG00000069267	ProperStrand	25	chr4	131908748	131908808	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.6029
chr17	28537399	28537453	protein_coding	Fkbp5	utr3	ENSMUSG00000024222	ProperStrand	44	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.8887
chr2	4974190	4974207	protein_coding	Optn	exon	ENSMUSG00000026672	ProperStrand	451	chr13	23399496	23399540	tRNA	tRNA98-ValCAC	.	1896503	ProperStrand	17	1	-11.8341
chr16	82489831	82489847	LINE	Lx8	L1	chr16Lx882489594	NonProperStrand	1	chr12	87297590	87336962	protein_coding	Ttll5	exon	ENSMUSG00000012609	NonProperStrand	6	1	-inf
chr13	9833564	9833653	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr6	91456580	91456657	protein_coding	Xpc	intron	ENSMUSG00000030094	ProperStrand	19	3	-16.4619
chr1	121941403	121941421	protein_coding	Sctr	intron	ENSMUSG00000026387	NonProperStrand	7	chr1	187066785	187066846	snoRNA	ENSMUSG00000077571_Snora36b	.	ENSMUSG00000077571	ProperStrand	244	1	-14.9385
chr6	40075662	40075683	protein_coding	Gm5567	intron	ENSMUSG00000057716	NonProperStrand	4	chr18	35714143	35714270	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-8.9582
chr11	120486719	120486742	protein_coding	Mafg	utr3	ENSMUSG00000051510	ProperStrand	23	chr18	35714213	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-8.7061
chr7	136800631	136800649	SINE	RSINE1	B4	chr7RSINE1136800606	ProperStrand	216	chr9	30975278	30976303	protein_coding	Aplp2	exon	ENSMUSG00000031996	ProperStrand	172	1	-8.6354
chr2	90235295	90235345	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr15	34372898	34372914	protein_coding	Rpl30	utr5	ENSMUSG00000058600	ProperStrand	65	1	-4.3101
chr7	30718256	30718346	protein_coding	Zfp74	utr3	ENSMUSG00000059975	ProperStrand	4	chr18	33954850	33954930	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-9.0265
chr8	42429212	42431486	protein_coding	Asah1	exon	ENSMUSG00000031591	ProperStrand	5	chr11	102294588	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	1	-14.0622
chr18	36784601	36784677	protein_coding	Ankhd1	exon	ENSMUSG00000024483	NonProperStrand	11	chr10	23505151	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	NonProperStrand	45	1	-17.3521
chr6	129628834	129628851	protein_coding	Klrc1	exon	ENSMUSG00000030167	NonProperStrand	49	chrX	84483703	84483721	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-8.6550
chr2	29925979	29926468	protein_coding	Set	exon	ENSMUSG00000054766	ProperStrand	167	chr4	131908689	131908808	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	6	-3.4259
chr3	85944551	85944608	snoRNA	ENSMUSG00000064390_Rnu73b	.	ENSMUSG00000064390	ProperStrand	164	chr7	116663633	116663723	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-0.9948
chr3	85417421	85417438	protein_coding	Pet112l	exon	ENSMUSG00000028085	ProperStrand	81	chr7	116664860	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-3.6927
chr2	158182155	158182255	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	chr2	91436229	91436336	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	2	-0.9499
chr15	82980102	82980224	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr7	150717298	150717422	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	5	-3.9720
chr17	56326667	56326715	protein_coding	Dpp9	utr3	ENSMUSG00000001229	ProperStrand	17	chr4	131908688	131908718	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.3002
chr2	32062089	32064248	protein_coding	Prrc2b	exon	ENSMUSG00000039262	ProperStrand	344	chr7	150717298	150717360	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	5	-10.8084
chr19	15812152	15812232	DNA	Charlie1a	MER1_type	chr19Charlie1a15812104	ProperStrand	1	chr19	15812503	15812593	DNA	Charlie1a	MER1_type	chr19Charlie1a15812319	ProperStrand	1	1	-inf
chr12	87633930	87633997	lincRNA	4732487G21Rik	intron	ENSMUSG00000084886	NonProperStrand	1	chr16	23110892	23110982	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr2	142894129	142896664	protein_coding	Snrpb2	exon	ENSMUSG00000008333	ProperStrand	11	chr9	15119968	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-10.7037
chr10	75322203	75322270	protein_coding	Mif	utr3	ENSMUSG00000033307	ProperStrand	146	chr14	54358225	54358250	pseudogene	Gm14031	.	ENSMUSG00000085302	ProperStrand	1	1	-inf
chr2	26767603	26767909	protein_coding	Rpl7a	exon	ENSMUSG00000062647	ProperStrand	234	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	5	-6.5795
chr13	9833563	9833615	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr7	148633882	148633927	protein_coding	Rplp2	exon	ENSMUSG00000025508	ProperStrand	106	3	-9.4578
chr4	21922274	21922291	protein_coding-noncoding	6230409E13Rik	utr5	ENSMUSG00000028246	ProperStrand	18	chr14	25312657	25312712	protein_coding	Rps24	exon	ENSMUSG00000025290	ProperStrand	110	1	-14.5436
chr13	114111371	114112986	protein_coding	BC067074	exon	ENSMUSG00000021763	ProperStrand	14	chr15	5068442	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-8.9991
chr5	30111576	30111656	protein_coding	Dnajb6	utr3	ENSMUSG00000029131	ProperStrand	81	chr3	68889049	68889139	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-2.7223
chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr14	31989654	31989670	protein_coding	Tnnc1	intron	ENSMUSG00000091898	ProperStrand	9	1	-10.3167
chr2	26767598	26767674	protein_coding	Rpl7a	exon	ENSMUSG00000062647	ProperStrand	234	chr11	48616641	48616705	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	1	-6.6376
chr17	4082163	4082213	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr17	28884082	28884103	protein_coding	Mapk14	utr3	ENSMUSG00000053436	ProperStrand	40	1	-10.7825
chr4	46508118	46508157	snoRNA	ENSMUSG00000064410_SNORA36	.	ENSMUSG00000064410	ProperStrand	133	chr16	23110454	23110528	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.2290
chr7	149268596	149268613	protein_coding	Dusp8	exon	ENSMUSG00000037887	NonProperStrand	7	chr7	117189877	117189901	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-7.5942
chr19	44188368	44188427	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr5	87354837	87354855	protein_coding	Ugt2b1	exon	ENSMUSG00000035836	ProperStrand	26	2	-15.0135
chr4	131908275	131908355	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	chr9	15117016	15117106	snoRNA	ENSMUSG00000077614_SNORA40	.	ENSMUSG00000077614	ProperStrand	54	1	-1.5731
chr15	78127411	78127427	protein_coding	Csf2rb2	exon	ENSMUSG00000071714	NonProperStrand	14	chr5	108336377	108336429	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-7.7830
chr3	127599006	127599023	protein_coding	5730508B09Rik	exon	ENSMUSG00000050549	ProperStrand	9	chrX	84483699	84483741	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-12.1312
chr11	114753110	114753126	protein_coding-noncoding	Cd300a	utr5	ENSMUSG00000034652	ProperStrand	7	chr6	70794803	70794820	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	1	-15.8562
chrX	148468652	148468677	protein_coding	Smc1a	exon	ENSMUSG00000041133	ProperStrand	104	chr4	131908351	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.7213
chr8	104155703	104155723	LINE	L1MCa	L1	chr8L1MCa104155463	ProperStrand	1	chr14	33005108	33005139	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-inf
chr13	85383868	85383938	protein_coding	Rasa1	exon	ENSMUSG00000021549	ProperStrand	48	chr9	120037898	120037978	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	9	-19.6310
chr16	32621276	32623035	protein_coding	Tfrc	intron	ENSMUSG00000022797	ProperStrand	71	chr15	79913288	79913346	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-5.6241
chr11	101431072	101432672	protein_coding	Nbr1	exon	ENSMUSG00000017119	ProperStrand	91	chr12	44844112	44844156	snoRNA	ENSMUSG00000065004_SNORA33	.	ENSMUSG00000065004	ProperStrand	111	1	-11.2407
chr17	71788897	71788987	protein_coding	Smchd1	intron	ENSMUSG00000024054	ProperStrand	79	chr11	6428087	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.7036
chr5	148113281	148113297	protein_coding	Cdx2	utr3	ENSMUSG00000029646	ProperStrand	276	chr12	86436073	86436090	protein_coding	Prox2	exon	ENSMUSG00000042320	NonProperStrand	2	1	-18.0422
chr8	8683671	8683761	protein_coding	Arglu1	exon	ENSMUSG00000040459	ProperStrand	20	chr7	116664794	116664874	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-4.5800
chr15	84161513	84162725	protein_coding	Parvg	exon	ENSMUSG00000022439	NonProperStrand	1	chr7	134703206	134703263	protein_coding	Srcap	exon	ENSMUSG00000090663	ProperStrand	28	1	-inf
chr13	46862961	46863025	snoRNA	ENSMUSG00000064558_SNORA55	.	ENSMUSG00000064558	ProperStrand	187	chr16	23109028	23109090	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	5	-20.6820
chr4	153655122	153655437	protein_coding	Arhgef16	exon	ENSMUSG00000029032	ProperStrand	12	chr19	8963022	8963122	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.2811
chr14	104352771	104352861	LINE	L1_Mus1	L1	chr14L1_Mus1104352346	ProperStrand	1	chr14	104352903	104352993	LINE	L1_Mus1	L1	chr14L1_Mus1104352837	NonProperStrand	1	1	-inf
chr11	4923377	4923454	protein_coding	Ap1b1	intron	ENSMUSG00000009090	ProperStrand	43	chr16	23110911	23110992	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-6.3625
chr8	82184951	82185008	protein_coding	Otud4	exon	ENSMUSG00000036990	ProperStrand	45	chr17	39985569	39985659	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-6.5007
chr10	53671371	53671392	protein_coding	Man1a	intron	ENSMUSG00000003746	NonProperStrand	8	chr7	52381718	52381759	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-11.7018
chr1	155318836	155325256	protein_coding	Dhx9	exon	ENSMUSG00000042699	ProperStrand	98	chr16	23110891	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-2.2180
chr17	35378737	35380058	protein_coding	Ddx39b	utr5	ENSMUSG00000019432	ProperStrand	119	chr9	103267924	103267986	protein_coding	Cdv3	utr5	ENSMUSG00000032803	ProperStrand	68	1	-11.6860
chr15	90060673	90060762	protein_coding	Alg10b	utr3	ENSMUSG00000075470	ProperStrand	15	chr18	73693111	73693144	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-8.3026
chr10	59756139	59756175	protein_coding	Psap	exon	ENSMUSG00000004207	ProperStrand	124	chr13	12488022	12488112	protein_coding	Heatr1	utr5	ENSMUSG00000050244	ProperStrand	74	4	-inf
chr16	23111390	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	chr13	90238585	90238700	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	15	-2.4910
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-3.5467
chr11	62365866	62365947	protein_coding	Ubb	exon	ENSMUSG00000019505	ProperStrand	32	chr15	79913288	79913333	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-7.9443
chr7	19590787	19590803	protein_coding	Irf2bp1	exon	ENSMUSG00000044030	ProperStrand	16	chr11	62416573	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-7.8033
chr2	41199972	41199989	protein_coding	Lrp1b	exon	ENSMUSG00000049252	ProperStrand	376	chr5	121655016	121655129	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	3	-2.7685
chr2	179923344	179925933	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr17	35299512	35299642	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	2	-2.9587
chr5	36813965	36814037	protein_coding	Grpel1	exon	ENSMUSG00000029198	ProperStrand	20	chr11	69138351	69138409	protein_coding	Trappc1	exon	ENSMUSG00000049299	ProperStrand	1	1	-inf
chr15	96825914	96825959	protein_coding	Slc38a4	utr3	ENSMUSG00000022464	ProperStrand	139	chr2	26494708	26494808	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	4	-6.7385
mmu-miR-6240	3	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr10	80318032	80318049	protein_coding	3110056O03Rik	utr5	ENSMUSG00000035206	ProperStrand	11	1	-9.3335
chr1	59761542	59762444	protein_coding	Nop58	exon	ENSMUSG00000026020	ProperStrand	104	chr4	131908356	131908419	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.7213
chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr17	24343586	24343602	protein_coding	Ntn3	exon	ENSMUSG00000079662	ProperStrand	237	2	-2.4933
chr2	90235315	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr3	155453747	155453764	LINE	Lx4A	L1	chr3Lx4A155453308	ProperStrand	16	1	-7.0757
chr14	19101591	19101663	protein_coding	Rpl15	exon	ENSMUSG00000012405	ProperStrand	145	chr10	23505559	23505621	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-5.8064
chr6	87138823	87154416	protein_coding	Antxr1	exon	ENSMUSG00000033420	ProperStrand	70	chr19	8963027	8963074	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.0216
chr1	141319671	141319687	protein_coding	Zbtb41	utr5	ENSMUSG00000033964	NonProperStrand	145	chr19	8963027	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-0.9731
chr10	11063464	11063480	protein_coding	Epm2a	exon	ENSMUSG00000055493	ProperStrand	28	chr1	89673550	89673592	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-4.6996
chr4	98403658	98403685	protein_coding	L1td1	exon	ENSMUSG00000087166	ProperStrand	43	chr3	68889026	68889140	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	4	-12.7331
chr4	43505774	43505864	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr5	37784394	37801510	protein_coding	Evc2	utr3	ENSMUSG00000050248	ProperStrand	8	1	-7.0216
chr15	25742314	25742355	protein_coding	Myo10	utr3	ENSMUSG00000022272	ProperStrand	168	chr19	46080183	46080199	protein_coding	Hps6	exon	ENSMUSG00000074811	NonProperStrand	45	1	-11.8277
chr13	96100641	96100691	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	chr6	125136498	125136588	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	1	-1.6552
chr19	8800356	8800446	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	chr2	158204033	158204086	snoRNA	ENSMUSG00000065840_SNORA71	.	ENSMUSG00000065840	ProperStrand	107	1	-2.5003
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr16	36071984	36072000	protein_coding	Ccdc58	utr5	ENSMUSG00000075229	NonProperStrand	55	1	-7.9135
chr19	38779853	38779869	protein_coding	Plce1	exon	ENSMUSG00000024998	ProperStrand	20	chr5	135097432	135097476	protein_coding	Eif4h	exon	ENSMUSG00000040731	ProperStrand	46	1	-16.0984
chr12	81213748	81213830	protein_coding	Zfp36l1	intron	ENSMUSG00000021127	ProperStrand	12	chr16	23110989	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.4686
chr19	7033621	7034293	protein_coding	Plcb3	exon	ENSMUSG00000024960	ProperStrand	111	chr11	68886941	68887021	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-3.0116
chr2	91386555	91388956	protein_coding	Ckap5	exon	ENSMUSG00000040549	ProperStrand	53	chr11	68876540	68876571	tRNA	tRNA1821-SerGCT	.	316571	ProperStrand	39	1	-14.4241
chr4	32561587	32561609	protein_coding	Bach2	intron	ENSMUSG00000040270	NonProperStrand	16	chr4	131908295	131908355	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.6705
chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	chr17	13115654	13115700	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	1	-3.4353
chr6	117874735	117874817	protein_coding	Hnrnpf	exon	ENSMUSG00000042079	ProperStrand	147	chr8	129468746	129468836	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-2.7678
chr10	127431641	127434767	protein_coding	Hsd17b6	exon	ENSMUSG00000025396	ProperStrand	12	chr14	34780775	34780847	protein_coding	Zfp488	utr3	ENSMUSG00000044519	NonProperStrand	39	1	-17.2612
chr7	84450107	84450129	SINE	MIRb	MIR	chr7MIRb84450001	NonProperStrand	1	chr18	35714178	35714278	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-inf
chr4	107565963	107567516	protein_coding	0610037L13Rik	exon	ENSMUSG00000028608	ProperStrand	3	chr16	23110990	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr4	41334270	41334309	protein_coding	Ubap1	exon	ENSMUSG00000028437	ProperStrand	9	chr10	80640527	80640568	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-9.9551
chr16	91866542	91866674	protein_coding	Itsn1	intron	ENSMUSG00000022957	ProperStrand	172	chr9	106183979	106183996	protein_coding	Poc1a	intron	ENSMUSG00000023345	ProperStrand	27	1	-12.8161
chr9	86573791	86573868	protein_coding	Me1	exon	ENSMUSG00000032418	ProperStrand	12	chr14	31827475	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-10.2099
chr8	87196351	87196389	protein_coding	Nacc1	utr3	ENSMUSG00000001910	ProperStrand	130	chr1	74902715	74902731	protein_coding	Cdk5r2	exon	ENSMUSG00000090071	NonProperStrand	49	1	-12.1700
chr11	4387930	4388011	protein_coding	Mtmr3	exon	ENSMUSG00000034354	ProperStrand	25	chr1	59539683	59539700	protein_coding	Fzd7	utr5	ENSMUSG00000041075	ProperStrand	373	1	-11.4234
chr9	63991913	63991940	protein_coding	Zwilch	exon	ENSMUSG00000032400	ProperStrand	29	chr17	13112499	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	2	-9.7879
chrX	83547356	83547372	protein_coding	Mageb4	intron	ENSMUSG00000035427	NonProperStrand	191	chr7	150717306	150717425	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-3.3134
chr10	69654136	69654226	protein_coding	Ccdc6	utr3	ENSMUSG00000048701	ProperStrand	72	chr13	49779672	49779752	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	8	-19.6475
chr13	24961273	24961353	protein_coding	D130043K22Rik	intron	ENSMUSG00000006711	ProperStrand	5	chrX	135065218	135065308	protein_coding	Il1rapl2	intron	ENSMUSG00000059203	NonProperStrand	23	1	-18.8987
chr10	75902942	75903022	protein_coding	Pcnt	exon	ENSMUSG00000001151	ProperStrand	127	chr11	30039056	30039146	protein_coding	Spnb2	exon	ENSMUSG00000020315	ProperStrand	103	1	-10.7224
chr1	133807260	133815614	protein_coding	Nucks1	utr5	ENSMUSG00000026434	ProperStrand	59	chr6	71832550	71832573	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-5.6439
mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr5	77738902	77738918	protein_coding	Noa1	exon	ENSMUSG00000036285	ProperStrand	147	1	-4.1744
chr2	134469526	134469543	protein_coding-noncoding	Tmx4	utr3	ENSMUSG00000034723	NonProperStrand	9	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	2	-18.0619
chr4	117819679	117819779	protein_coding	Kdm4a	exon	ENSMUSG00000033326	ProperStrand	81	chr18	35716851	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	5	-8.8702
chr4	81748581	81748614	lincRNA	Gm5860	exon	ENSMUSG00000085022	ProperStrand	9	chr16	23111391	23111481	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.5836
chr10	122002949	122003029	LINE	L1Md_F2	L1	chr10L1Md_F2122002095	NonProperStrand	23	chr4	51899367	51899457	LINE	L1Md_T	L1	chr4L1Md_T51898714	NonProperStrand	1	1	-inf
chr6	113991688	113991710	lincRNA	Gm15083	intron	ENSMUSG00000087083	ProperStrand	1	chr9	120038552	120038629	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-inf
chr4	149021627	149021722	protein_coding	Clstn1	utr3	ENSMUSG00000039953	ProperStrand	173	chr14	76247792	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-2.2722
chr2	26265380	26265401	protein_coding	Sec16a	utr3	ENSMUSG00000026924	ProperStrand	86	chr5	108334195	108334279	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-4.1330
chr1	13132799	13132845	protein_coding	Ncoa2	utr3	ENSMUSG00000005886	ProperStrand	26	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-5.2030
chr1	134900458	134900533	protein_coding	Mdm4	intron	ENSMUSG00000054387	ProperStrand	95	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-4.0670
chr13	97382271	97382303	protein_coding	Col4a3bp	exon	ENSMUSG00000021669	ProperStrand	3	chr16	23110962	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr17	38290745	38290764	LTR	MurERV4-int	ERVK	chr17MurERV4-int38290059	ProperStrand	21	chr1	185857228	185857244	protein_coding	1700056E22Rik	exon	ENSMUSG00000044854	ProperStrand	173	1	-13.3180
chr11	79506867	79506946	protein_coding	Rab11fip4	utr3	ENSMUSG00000017639	ProperStrand	30	chr2	121949510	121949526	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	2	-18.1858
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr11	80415108	80415125	protein_coding	Myo1d	exon	ENSMUSG00000035441	ProperStrand	144	1	-6.0615
chr15	72932628	72932675	protein_coding	Eif2c2	utr3	ENSMUSG00000036698	ProperStrand	154	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-5.1331
chr3	100371541	100371558	protein_coding	Man1a2	exon	ENSMUSG00000008763	NonProperStrand	28	chr19	8963027	8963065	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.6314
chr6	33246866	33246913	protein_coding	Exoc4	exon	ENSMUSG00000029763	ProperStrand	120	chr3	153991597	153991614	protein_coding	Lhx8	utr5	ENSMUSG00000093486	NonProperStrand	47	1	-12.4150
chr15	88977274	88977290	protein_coding	Mapk11	intron	ENSMUSG00000053137	NonProperStrand	29	chr18	35716763	35716787	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.4490
chr7	130336800	130336931	protein_coding	Tnrc6a	utr3	ENSMUSG00000052707	ProperStrand	37	chr18	33954817	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	6	-19.7662
chr7	96107833	96107849	LTR	RLTR23	ERV1	chr7RLTR2396107462	ProperStrand	11	chr4	132394351	132394418	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	1	-12.6016
chr18	73693085	73693193	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr8	73419657	73419790	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	24	-3.4216
chr14	19102825	19102905	protein_coding	Rpl15	exon	ENSMUSG00000012405	ProperStrand	145	chr9	71908867	71908958	protein_coding	Rpl15-ps2	exon	ENSMUSG00000073229	ProperStrand	1	1	-inf
chr6	72178971	72178988	protein_coding	Atoh8	intron	ENSMUSG00000037621	NonProperStrand	61	chr7	52171838	52184697	protein_coding	Ap2a1	exon	ENSMUSG00000060279	ProperStrand	193	1	-10.9365
chr13	46452081	46452097	LTR	MTD	MaLR	chr13MTD46451843	ProperStrand	1	chr11	109258707	109258797	protein_coding	Gna13	utr3	ENSMUSG00000020611	ProperStrand	23	1	-inf
chr4	63389602	63389618	protein_coding	Tnfsf15	utr3	ENSMUSG00000050395	NonProperStrand	121	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.8133
chr17	38769441	38769458	LTR	MMERVK10C-int	ERVK	chr17MMERVK10C-int38767941	ProperStrand	15	chr2	91436228	91436301	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	2	-16.3639
chr4	131865379	131865496	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	chr13	23492661	23492698	tRNA	tRNA966-AlaAGC	.	1146498	ProperStrand	20	1	-6.1433
chr8	112387973	112387989	antisense	Gm17344	.	ENSMUSG00000078143	NonProperStrand	100	chr15	79913307	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.6749
chr6	18384527	18384543	protein_coding	Cttnbp2	exon	ENSMUSG00000000416	NonProperStrand	3	chr7	20310054	20310070	protein_coding	Pvrl2	exon	ENSMUSG00000062300	ProperStrand	110	1	-18.6910
chr4	43505780	43505860	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr15	103028441	103028531	protein_coding	Cbx5	utr3	ENSMUSG00000009575	ProperStrand	98	1	-2.2220
chr16	20686013	20686311	protein_coding	Eif4g1	exon	ENSMUSG00000045983	ProperStrand	199	chr7	52382237	52382269	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-5.9089
chrX	10296242	10296332	protein_coding	Mid1ip1	utr3	ENSMUSG00000008035	ProperStrand	27	chr9	15119645	15119725	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.0899
chr13	23713747	23713847	protein_coding	Hist1h1e	exon	ENSMUSG00000051627	ProperStrand	41	chr10	23506280	23506305	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-7.7074
chr9	106761109	106761209	protein_coding	Vprbp	exon	ENSMUSG00000040325	ProperStrand	35	chr4	131908809	131908882	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.0337
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr7	26149440	26149456	protein_coding	Megf8	exon	ENSMUSG00000045039	NonProperStrand	45	2	-14.5339
chrX	130984218	130984235	protein_coding	Drp2	exon	ENSMUSG00000000223	ProperStrand	9	chr17	28033358	28033401	protein_coding	Uhrf1bp1	utr3	ENSMUSG00000039512	ProperStrand	79	1	-16.6389
chr3	156224612	156224628	lincRNA	4930570G19Rik	exon	ENSMUSG00000085084	ProperStrand	326	chr9	15118321	15118375	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-0.8190
chr10	59326644	59326734	protein_coding	Micu1	utr3	ENSMUSG00000020111	ProperStrand	4	chr14	55283718	55283798	protein_coding	Acin1	exon	ENSMUSG00000022185	ProperStrand	67	1	-18.3894
chr8	120322669	120322769	protein_coding	Mphosph6	intron	ENSMUSG00000031843	ProperStrand	1	chr5	130300518	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-inf
chr7	133726521	133726538	protein_coding	Cln3	exon	ENSMUSG00000030720	ProperStrand	87	chr2	32818816	32818882	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-4.7507
chr7	86606741	86606773	protein_coding	Polg	exon	ENSMUSG00000039176	ProperStrand	93	chr5	23358037	23358098	snoRNA	ENSMUSG00000093321_Snord93	.	ENSMUSG00000093321	ProperStrand	218	1	-9.8460
chr13	38022417	38022552	protein_coding	Rreb1	exon	ENSMUSG00000039087	ProperStrand	33	chr19	8963027	8963044	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.3267
chr11	12153308	12153398	protein_coding	Cobl	exon	ENSMUSG00000020173	ProperStrand	133	chr7	116664819	116664899	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.2990
chr11	106561158	106576230	protein_coding	Pecam1	exon	ENSMUSG00000020717	ProperStrand	56	chr17	35089184	35089234	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	2	-9.1878
chr11	105882163	105882225	protein_coding	Kcnh6	intron	ENSMUSG00000001901	ProperStrand	5	chr7	125270654	125270705	protein_coding	Arl6ip1	exon	ENSMUSG00000030654	ProperStrand	57	5	-inf
chr5	121655105	121655156	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	chr9	40611685	40611752	snoRNA	ENSMUSG00000075876_Snord14c	.	ENSMUSG00000075876	ProperStrand	104	1	-2.7528
chrX	108217810	108217827	LINE	L1_Mus4	L1	chrXL1_Mus4108216540	NonProperStrand	6	chr19	6248245	6248262	protein_coding	Atg2a	exon	ENSMUSG00000024773	NonProperStrand	9	1	-18.9485
chr1	172612010	172612026	protein_coding	Olfml2b	exon	ENSMUSG00000038463	ProperStrand	57	chr1	162967503	162967530	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-3.5689
chr3	153574606	153574654	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	chr8	73419657	73419715	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-1.9022
chr11	63885336	63887052	protein_coding	Cox10	exon	ENSMUSG00000042148	NonProperStrand	187	chr17	20504247	20504264	protein_coding	Vmn2r107	intron	ENSMUSG00000056910	NonProperStrand	7	1	-15.4783
chr11	106113780	106113870	protein_coding	Ftsj3	exon	ENSMUSG00000020706	ProperStrand	64	chr7	116663700	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.4017
chr14	29324483	29324509	lincRNA	Gm2670	intron	ENSMUSG00000091966	ProperStrand	3	chr13	108613060	108613078	protein_coding	Zswim6	intron	ENSMUSG00000032846	NonProperStrand	19	1	-inf
chr15	97685556	97685573	protein_coding	Vdr	utr3	ENSMUSG00000022479	ProperStrand	14	chr8	98269959	98270057	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	6	-inf
chr2	53003875	53003891	protein_coding	Prpf40a	exon	ENSMUSG00000061136	ProperStrand	129	chr7	52382237	52382314	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-6.7610
chr7	29786784	29786802	protein_coding	Map4k1	exon	ENSMUSG00000037337	ProperStrand	31	chr11	69483136	69483237	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-6.1882
chr10	77060406	77060506	protein_coding	Pttg1ip	utr3	ENSMUSG00000009291	ProperStrand	28	chr17	35299507	35299550	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-6.2728
chr6	126075509	126075527	protein_coding	Ntf3	intron	ENSMUSG00000049107	NonProperStrand	38	chr9	108506776	108506793	protein_coding	Arih2	utr3	ENSMUSG00000064145	ProperStrand	9	1	-17.9268
chr5	38611747	38611764	protein_coding	Lyar	utr5	ENSMUSG00000067367	NonProperStrand	1	chr18	33954816	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-inf
chr14	64111341	64112692	protein_coding	Tdh	exon	ENSMUSG00000021953	ProperStrand	67	chr10	23505152	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-3.4353
chr9	15082158	15084062	protein_coding	Med17	exon	ENSMUSG00000031935	ProperStrand	135	chr3	85944546	85944609	snoRNA	ENSMUSG00000064390_Rnu73b	.	ENSMUSG00000064390	ProperStrand	164	1	-9.6687
chr2	30029253	30029303	protein_coding	D2Wsu81e	utr3	ENSMUSG00000039660	ProperStrand	7	chr7	116663715	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	4	-inf
chr3	97386688	97386778	protein_coding	Chd1l	exon	ENSMUSG00000028089	ProperStrand	15	chr9	64023242	64023322	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	4	-19.7254
chr8	11808839	11809518	protein_coding	Arhgef7	exon	ENSMUSG00000031511	ProperStrand	38	chr7	116664852	116664914	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	4	-11.4233
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr3	41418489	41418606	protein_coding	Phf17	utr3	ENSMUSG00000025764	ProperStrand	101	1	-5.3479
chr2	179322380	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr8	40681587	40681603	protein_coding	Msr1	intron	ENSMUSG00000025044	ProperStrand	138	2	-15.0703
chr9	13612826	13612916	protein_coding	Cep57	utr3	ENSMUSG00000031922	ProperStrand	8	chr5	121655027	121655107	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-7.7589
chr18	80408596	80408649	protein_coding	Gm16286	exon	ENSMUSG00000024571	ProperStrand	15	chr8	40069189	40109598	protein_coding	Tusc3	exon	ENSMUSG00000039530	ProperStrand	15	1	-19.0472
chr9	59523499	59525888	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr12	56700674	56700694	protein_coding	Insm2	exon	ENSMUSG00000045440	NonProperStrand	22	1	-9.1980
chr5	141237083	141237183	protein_coding	Gna12	intron	ENSMUSG00000000149	ProperStrand	54	chr16	23110530	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.6430
chr4	141257224	141257292	protein_coding	Ddi2	intron	ENSMUSG00000078515	ProperStrand	79	chr16	23110552	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.0054
chr11	29642267	29642294	protein_coding	Rtn4	utr3	ENSMUSG00000020458	ProperStrand	117	chrX	34622906	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	3	-5.5523
chr12	16946820	16946894	snoRNA	ENSMUSG00000064620_SNORA32	.	ENSMUSG00000064620	ProperStrand	165	chr15	79908960	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	4	-11.7569
chr1	145971868	145971889	LINE	L2	L2	chr1L2145971861	NonProperStrand	49	chr1	162966208	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-7.9809
chr5	34828758	34828848	protein_coding	Fam193a	utr3	ENSMUSG00000037210	ProperStrand	41	chr7	150717298	150717378	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-6.2565
chr7	150717326	150717426	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	NonProperStrand	3	chr6	71832635	71832687	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	NonProperStrand	5	1	-inf
chr9	57638475	57638512	protein_coding	Arid3b	utr3	ENSMUSG00000004661	ProperStrand	39	chr4	143027927	143028559	protein_coding	Oog4	exon	ENSMUSG00000047799	NonProperStrand	99	1	-13.1757
chrX	7508792	7508892	protein_coding	Hdac6	exon	ENSMUSG00000031161	ProperStrand	42	chr7	29136632	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.9861
chr2	179994779	179994843	protein_coding	Cables2	exon	ENSMUSG00000038990	ProperStrand	9	chr4	147128522	147128546	protein_coding	Gm13157	utr3	ENSMUSG00000078495	ProperStrand	13	3	-19.7055
chr18	56919410	56919490	DNA	URR1B	MER1_type	chr18URR1B56919298	NonProperStrand	1	chr18	56919188	56919278	SINE	B1_Mus1	Alu	chr18B1_Mus156919126	ProperStrand	1	1	-inf
chr5	149682880	149682970	Low_complexity	GA-rich	Low_complexity	chr5GA-rich149682848	NonProperStrand	1	chr5	53478611	53478691	SINE	MIR	MIR	chr5MIR53478590	ProperStrand	1	1	-inf
chr7	134336546	134336598	protein_coding	Cd2bp2	utr3	ENSMUSG00000042502	ProperStrand	73	chr18	35716787	35716877	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	39	-inf
chr3	38350242	38350270	protein_coding	Ankrd50	utr3	ENSMUSG00000044864	ProperStrand	36	chr2	158205268	158205358	snoRNA	ENSMUSG00000064585_SNORA71	.	ENSMUSG00000064585	ProperStrand	418	1	-10.4556
chr19	45071862	45071878	protein_coding	Sema4g	exon	ENSMUSG00000025207	ProperStrand	58	chr8	113362492	113362512	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	1	-9.3336
chr4	138836408	138836453	protein_coding	Capzb	exon	ENSMUSG00000028745	ProperStrand	44	chr5	115700039	115700129	protein_coding	Rnf10	exon	ENSMUSG00000041740	ProperStrand	95	1	-13.0184
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr14	60851422	60851443	protein_coding	Nupl1	exon	ENSMUSG00000063895	ProperStrand	16	1	-9.5937
chr4	138867205	138867223	protein_coding	Akr7a5	intron	ENSMUSG00000028743	ProperStrand	22	chr7	29136525	29136580	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.1896
chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	chr2	22444641	22444679	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-2.4654
chr9	106591147	106591247	protein_coding	Rad54l2	utr3	ENSMUSG00000040661	ProperStrand	51	chr7	67125763	67125790	snoRNA	ENSMUSG00000089375_Snord107	.	ENSMUSG00000089375	ProperStrand	451	11	-inf
chr1	178754159	178754175	protein_coding	Sdccag8	intron	ENSMUSG00000026504	ProperStrand	54	chrX	166426836	166426864	protein_coding	Mid1	exon	ENSMUSG00000035299	ProperStrand	209	1	-11.0225
chr14	15572355	15572371	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr10	110918597	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-1.7251
chr11	109199618	109199639	LTR	RLTR11A	ERVK	chr11RLTR11A109199375	NonProperStrand	2	chr10	23505152	23505212	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-inf
chr18	63238395	63238411	protein_coding	Fam38b	exon	ENSMUSG00000041482	NonProperStrand	50	chr10	110918548	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-3.7865
chr19	8798984	8799008	lincRNA	Snhg1	exon	ENSMUSG00000090867	ProperStrand	100	chr9	100979035	100979052	protein_coding	Msl2	exon	ENSMUSG00000066415	NonProperStrand	9	1	-16.1935
chr6	97155314	97155331	protein_coding	Uba3	exon	ENSMUSG00000030061	ProperStrand	37	chr6	113017321	113017368	protein_coding	Thumpd3	exon	ENSMUSG00000030264	ProperStrand	11	1	-17.6760
chr9	97648282	97648299	protein_coding	Clstn2	intron	ENSMUSG00000032452	ProperStrand	21	chr9	120038589	120038656	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.0221
chr8	25656321	25656338	protein_coding	Ido2	intron	ENSMUSG00000031549	NonProperStrand	29	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.6451
chr12	92811864	92811886	protein_coding	Gtf2a1	intron	ENSMUSG00000020962	ProperStrand	61	chr10	23505538	23505610	protein_coding	Rps12	intron	ENSMUSG00000061983	ProperStrand	309	5	-21.0326
chr8	127318302	127318318	protein_coding	Trim67	exon	ENSMUSG00000036913	ProperStrand	43	chr9	15119646	15119761	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.2218
chr1	166128919	166129019	protein_coding	F5	exon	ENSMUSG00000026579	ProperStrand	7	chr19	8799844	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-9.3077
chr7	30231512	30231592	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	chr2	91436245	91436335	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-3.2040
chr2	61641619	61641638	protein_coding-noncoding	Tbr1	utr5	ENSMUSG00000035033	ProperStrand	1	chr5	121655016	121655066	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-inf
chr7	51505840	51505884	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	chr1	162966812	162966843	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-1.9365
chr14	119006269	119006287	protein_coding	Abcc4	intron	ENSMUSG00000032849	NonProperStrand	24	chr4	131908397	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.9196
chr6	24565474	24565574	protein_coding	Wasl	utr3	ENSMUSG00000029684	ProperStrand	25	chr10	110918616	110918693	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-5.1172
chr1	74467879	74470453	protein_coding	Vil1	exon	ENSMUSG00000026175	ProperStrand	68	chr16	23110828	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-1.1862
chr19	38869531	38869547	protein_coding	Noc3l	exon	ENSMUSG00000024999	NonProperStrand	149	chr9	50816824	50816841	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	1	-9.9827
chr15	89259093	89259156	protein_coding-noncoding	Chkb	utr3	ENSMUSG00000022617	ProperStrand	4	chr10	127895516	127895568	tRNA	tRNA688-SerCGA	.	644947	ProperStrand	71	1	-18.7270
chr11	97641536	97641591	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	chr2	130101268	130101310	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-1.6095
chr9	122918460	122918891	protein_coding	Kif15	exon	ENSMUSG00000036768	ProperStrand	46	chr14	33005157	33005237	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-4.4984
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr2	151387224	151387245	protein_coding	Fkbp1a	utr3	ENSMUSG00000032966	ProperStrand	36	1	-8.0491
chr14	45949538	45949554	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	chr11	106362636	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-4.1097
chr6	115876313	115876330	protein_coding	Ift122	exon	ENSMUSG00000030323	ProperStrand	20	chr17	23955821	23955839	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	1	-13.7048
chr10	85410032	85410075	protein_coding	D10Wsu52e	exon	ENSMUSG00000001783	ProperStrand	45	chr5	130300496	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.0143
chr9	65479187	65479205	protein_coding	Rbpms2	intron	ENSMUSG00000032387	NonProperStrand	7	chr17	24857716	24857775	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-6.4221
chr2	26447990	26448087	protein_coding	Egfl7	utr3	ENSMUSG00000026921	ProperStrand	44	chr7	117190025	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.9072
chr8	72613823	72613839	protein_coding	Hapln4	utr3	ENSMUSG00000007594	NonProperStrand	85	chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	1	-10.7342
chr5	111784588	111816960	protein_coding	Pitpnb	utr3	ENSMUSG00000050017	ProperStrand	137	chr16	23110876	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-1.1009
chr4	122970425	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	chr19	8799834	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	4	-2.3491
chr19	34744113	34744129	protein_coding	Slc16a12	utr3	ENSMUSG00000009378	ProperStrand	3	chr2	158185577	158185651	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-12.8309
chr2	91842008	91842088	protein_coding	Creb3l1	exon	ENSMUSG00000027230	ProperStrand	12	chr16	16231041	16231131	protein_coding	Pkp2	intron	ENSMUSG00000041957	ProperStrand	19	2	-inf
chr1	183960323	183960403	SINE	B3	B2	chr1B3183960179	NonProperStrand	1	chr7	104977532	104977622	protein_coding	Pak1	intron	ENSMUSG00000030774	ProperStrand	13	1	-inf
chr1	162965531	162965549	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	NonProperStrand	10	chr11	55296206	55296332	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	NonProperStrand	5	1	-19.5370
chr2	91436245	91436336	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	chr7	116664794	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	11	-1.9024
chr9	15119310	15119410	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	chr14	51709218	51709267	tRNA	tRNA191-TyrGTA	.	522089	ProperStrand	21	8	-20.4660
chr4	65266097	65266225	protein_coding	Trim32	utr5	ENSMUSG00000051675	ProperStrand	42	chr2	130101241	130101265	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	2	-11.7318
chr7	104875045	104875063	protein_coding	Aqp11	utr3	ENSMUSG00000042797	NonProperStrand	1	chrX	34622905	34622957	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-inf
chr7	19548850	19548867	lincRNA	Gm17370	exon	ENSMUSG00000092034	ProperStrand	8	chr15	79913303	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-7.5918
chr16	23110986	23111012	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr3	108189509	108189618	protein_coding	Psrc1	exon	ENSMUSG00000068744	ProperStrand	38	1	-9.9333
chr9	21823257	21823273	protein_coding	Elavl3	exon	ENSMUSG00000003410	NonProperStrand	137	chr18	75161686	75161730	protein_coding	Rpl17	exon	ENSMUSG00000062328	ProperStrand	90	1	-10.8411
chr4	129324173	129324227	protein_coding	Kpna6	utr3	ENSMUSG00000003731	ProperStrand	39	chr16	23111466	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-5.3425
chrX	83547356	83547372	protein_coding	Mageb4	intron	ENSMUSG00000035427	NonProperStrand	191	chr17	24856708	24856753	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-4.1839
chr6	126814861	126814880	protein_coding	Akap3	exon	ENSMUSG00000030344	NonProperStrand	3	chr16	23111458	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-6.9982
chr15	57939990	57940042	protein_coding	Atad2	exon	ENSMUSG00000022360	ProperStrand	47	chr7	116664833	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-7.6425
chr8	72809415	72809835	protein_coding	Homer3	exon	ENSMUSG00000003573	ProperStrand	45	chr15	98350146	98350241	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-5.3188
chr5	74489261	74489331	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr7	52560178	52560194	protein_coding	Trpm4	utr3	ENSMUSG00000038260	ProperStrand	161	1	-3.7348
chr1	145626159	145626198	protein_coding	Uchl5	intron	ENSMUSG00000018189	ProperStrand	15	chr7	116663692	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	4	-16.3156
chr15	25901346	25901436	protein_coding	Fam134b	exon	ENSMUSG00000022270	ProperStrand	18	chrX	34622958	34623024	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	7	-19.7146
chr2	24695209	24703496	protein_coding	Ehmt1	exon	ENSMUSG00000036893	ProperStrand	45	chr14	76247731	76247752	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-4.7221
chr9	83802931	83802949	SINE	B1F	Alu	chr9B1F83802880	ProperStrand	4	chr2	57090809	57090827	protein_coding	Gpd2	utr5	ENSMUSG00000026827	ProperStrand	93	1	-17.9098
chr15	31531899	31535676	protein_coding	Fam173b	exon	ENSMUSG00000039065	NonProperStrand	3	chr11	77995196	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	2	-inf
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	69925631	70056733	protein_coding	Cdk5rap2	intron	ENSMUSG00000039298	ProperStrand	810	8	-7.7667
chr1	163020395	163020475	protein_coding	Klhl20	utr3	ENSMUSG00000026705	ProperStrand	11	chr7	116663675	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-5.7314
chr10	85512442	85512459	protein_coding	Fbxo7	utr3	ENSMUSG00000001786	ProperStrand	13	chr7	118219575	118219647	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-7.1950
chr17	56148666	56148805	protein_coding	Mpnd	exon	ENSMUSG00000003199	ProperStrand	71	chr18	35716789	35716878	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.8974
chr2	26493366	26493449	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr16	18240810	18240901	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	2	-1.2003
chr10	80641694	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	chr16	20684311	20684388	snoRNA	ENSMUSG00000077239_Snord66	.	ENSMUSG00000077239	ProperStrand	159	2	-9.1781
chr4	133920826	133920844	protein_coding	Extl1	exon	ENSMUSG00000028838	NonProperStrand	7	chr10	23505152	23505247	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-8.5700
chr19	6376307	6376373	protein_coding	Sf1	exon	ENSMUSG00000024949	ProperStrand	251	chr3	95980392	95980410	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-4.0810
chr10	127563397	127563457	protein_coding	Baz2a	exon	ENSMUSG00000040054	ProperStrand	274	chr11	68886962	68887038	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	3	-4.4266
chr4	118807062	118808420	protein_coding	Slc2a1	exon	ENSMUSG00000028645	ProperStrand	361	chr1	161270520	161270554	snoRNA	ENSMUSG00000089536_Scarna3a	.	ENSMUSG00000089536	ProperStrand	247	1	-6.8984
chr17	31640574	31640590	protein_coding	Wdr4	exon	ENSMUSG00000024037	NonProperStrand	18	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-9.3517
chr5	124821691	124821724	protein_coding	Sbno1	utr3	ENSMUSG00000038095	ProperStrand	134	chr5	130295510	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-3.7189
chr12	71347267	71347283	protein_coding	Trim9	utr3	ENSMUSG00000021071	NonProperStrand	75	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-8.4797
chr11	35543969	35543987	LTR	RMER17A2	ERVK	chr11RMER17A235543565	NonProperStrand	1	chr5	121655017	121655153	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-inf
chr11	72997835	72997874	protein_coding	Ctns	utr3	ENSMUSG00000005949	ProperStrand	28	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-9.6941
chr19	6297547	6297637	protein_coding	Ehd1	exon	ENSMUSG00000024772	ProperStrand	30	chr16	23110840	23110920	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0481
chr6	39473751	39507666	protein_coding	Dennd2a	utr5	ENSMUSG00000038456	ProperStrand	13	chr10	110918578	110918635	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-6.4274
chr9	95567432	95567448	protein_coding	Pcolce2	intron	ENSMUSG00000015354	NonProperStrand	9	chr17	17511600	17511629	protein_coding	Riok2	exon	ENSMUSG00000023846	ProperStrand	8	1	-18.7584
chr19	31019403	31019420	protein_coding	Prkg1	intron	ENSMUSG00000052920	ProperStrand	32	chr15	34370545	34370615	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-4.7407
chr11	60255588	60255604	protein_coding	4933439F18Rik	utr3	ENSMUSG00000018415	NonProperStrand	2	chr19	45123750	45124359	protein_coding	Sfxn3	exon	ENSMUSG00000025212	NonProperStrand	22	1	-inf
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr6	70794802	70794820	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	1	-6.1066
chr11	74718931	74718957	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	chr5	147646730	147646796	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	4	-12.3715
chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	chr8	97876680	97876768	protein_coding	Mmp15	utr5	ENSMUSG00000031790	ProperStrand	13	1	-12.3231
chr11	67694780	67696749	protein_coding	Usp43	exon	ENSMUSG00000020905	ProperStrand	3	chr7	116664819	116664868	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-14.6076
chr3	136526736	136526753	protein_coding	Ppp3ca	intron	ENSMUSG00000028161	NonProperStrand	120	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	2	-11.5738
chr12	88778746	88778774	protein_coding	Alkbh1	intron	ENSMUSG00000079036	ProperStrand	70	chr11	69481432	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	4	-10.1695
chr4	145264491	145286091	protein_coding	Gm13242	intron	ENSMUSG00000058186	ProperStrand	6	chr19	8963099	8963179	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-6.7266
chr16	16890346	16890715	protein_coding	Top3b	exon	ENSMUSG00000022779	ProperStrand	36	chr16	23111436	23111499	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.0295
chr15	76366656	76366746	protein_coding	Fbxl6	exon	ENSMUSG00000022559	ProperStrand	5	chr5	130300438	130300518	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-7.4021
chr5	143139023	143139093	protein_coding	Wipi2	exon	ENSMUSG00000029578	ProperStrand	49	chrX	152009278	152009294	protein_coding	Ptchd1	exon	ENSMUSG00000041552	NonProperStrand	294	1	-10.5360
chr16	5022044	5022088	protein_coding	Glyr1	intron	ENSMUSG00000022536	ProperStrand	60	chr6	4710043	4710104	protein_coding	Peg10	utr3	ENSMUSG00000092035	ProperStrand	102	3	-19.9492
chr11	92187088	92187111	LTR	RMER17D2	ERVK	chr11RMER17D292186950	NonProperStrand	1	chr5	74489266	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	1	-inf
chr17	45802450	45802466	antisense	Gm16172	.	ENSMUSG00000086472	ProperStrand	17	chr1	59712327	59712375	protein_coding	Sumo1	exon	ENSMUSG00000026021	ProperStrand	9	1	-19.7748
chr4	48482838	48482928	protein_coding	Tex10	exon	ENSMUSG00000028345	ProperStrand	9	chr3	123210883	123210963	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.6210
chr7	4099654	4099693	protein_coding	Leng8	utr3	ENSMUSG00000035545	ProperStrand	49	chr10	23505193	23505284	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.5211
chr8	63391530	63391546	protein_coding	Clcn3	utr3	ENSMUSG00000004319	NonProperStrand	5	chr4	131865866	131865896	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-6.5022
chr9	65127126	65127142	protein_coding	Cilp	exon	ENSMUSG00000042254	ProperStrand	212	chr1	36749084	36749103	protein_coding	Cox5b	exon	ENSMUSG00000061518	ProperStrand	43	1	-11.4535
chr9	48918759	48918849	protein_coding	Tmprss5	intron	ENSMUSG00000032268	ProperStrand	1	chr4	131865383	131865463	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-inf
chr6	128649422	128649442	LINE	L1_Mus2	L1	chr6L1_Mus2128644136	NonProperStrand	2	chr1	88247803	88247862	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-12.5019
chr15	79984100	79984131	protein_coding	Tab1	exon	ENSMUSG00000022414	ProperStrand	11	chr7	116664794	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-13.7147
chr3	102847562	102847782	protein_coding	Csde1	exon	ENSMUSG00000068823	ProperStrand	122	chr9	120037991	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-3.3740
chr14	78912206	78912248	protein_coding	Akap11	exon	ENSMUSG00000022016	ProperStrand	44	chr8	73419656	73419711	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.6992
chr17	27889786	27889845	protein_coding	D17Wsu92e	utr3	ENSMUSG00000056692	ProperStrand	61	chr13	23618321	23618359	tRNA	tRNA948-ArgTCG	.	1131029	ProperStrand	26	1	-14.9681
chr5	108542450	108542493	protein_coding	Tmed5	intron	ENSMUSG00000063406	NonProperStrand	2	chr4	131908689	131908797	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-8.0336
chr2	127416797	127416887	protein_coding	Mrps5	intron	ENSMUSG00000027374	ProperStrand	84	chr17	68106086	68110995	protein_coding	Lama1	exon	ENSMUSG00000032796	ProperStrand	168	1	-10.5713
chr9	103950068	103950086	protein_coding	Uba5	intron	ENSMUSG00000032557	ProperStrand	111	chr7	134671400	134671463	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-6.6496
chr18	56698390	56701960	protein_coding	Aldh7a1	exon	ENSMUSG00000053644	ProperStrand	14	chr1	162966026	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-6.4421
chr2	90235290	90235345	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	116664792	116664925	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	66	-9.6122
chr10	59763297	59763542	protein_coding	Psap	exon	ENSMUSG00000004207	ProperStrand	124	chr11	97643008	97643088	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.3336
chr9	114626696	114626786	protein_coding	Dync1li1	intron	ENSMUSG00000032435	ProperStrand	33	chr11	69481337	69481417	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-4.3164
chr11	116535470	116535531	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr17	35087909	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	4	-0.7515
chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	chr5	20878560	20878577	protein_coding	Ccdc146	intron	ENSMUSG00000064280	ProperStrand	3	1	-16.5139
chr13	52930687	52930773	protein_coding	Auh	utr3	ENSMUSG00000021460	ProperStrand	10	chr9	120038468	120038558	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-6.5201
chr1	36988461	36988552	protein_coding	Tmem131	intron	ENSMUSG00000026116	ProperStrand	129	chr17	24857714	24857749	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	7	-10.6539
chr16	20716464	20716480	protein_coding-noncoding	Clcn2	utr5	ENSMUSG00000022843	NonProperStrand	4	chr9	120039626	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-8.8220
chr15	76135669	76135759	protein_coding	Oplah	exon	ENSMUSG00000022562	ProperStrand	20	chr10	90581059	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	13	-20.7887
chr1	124298935	124298952	LINE	Lx3_Mus	L1	chr1Lx3_Mus124298684	ProperStrand	10	chr11	69711190	69711219	protein_coding	2810408A11Rik	exon	ENSMUSG00000018570	ProperStrand	3	1	-inf
chr8	73336282	73336372	protein_coding	Il12rb1	intron	ENSMUSG00000000791	NonProperStrand	3	chr8	73336163	73336253	protein_coding	Il12rb1	intron	ENSMUSG00000000791	ProperStrand	3	1	-inf
chr4	43505656	43505682	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr16	32243886	32243943	snoRNA	ENSMUSG00000080440_SNORA79	.	ENSMUSG00000080440	ProperStrand	140	2	-3.0608
chr16	20179677	20186342	protein_coding	Yeats2	exon	ENSMUSG00000041215	ProperStrand	21	chr19	8963094	8963174	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.1775
chr15	34447738	34455972	protein_coding	Pop1	exon	ENSMUSG00000022325	ProperStrand	19	chr11	98684294	98684374	protein_coding	Casc3	exon	ENSMUSG00000078676	ProperStrand	33	2	-19.4271
chr17	46812099	46813461	protein_coding	Klhdc3	exon	ENSMUSG00000063576	ProperStrand	35	chr9	15118518	15118544	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	1	-10.4283
chr5	118376503	118376519	protein_coding	Nos1	exon	ENSMUSG00000029361	NonProperStrand	237	chr5	108336363	108336432	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-2.3689
chr4	43505837	43505927	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr8	44387283	44387363	protein_coding	Zfp42	intron	ENSMUSG00000051176	ProperStrand	127	1	-1.8058
chr11	112660201	112660218	lincRNA	Gm11681	exon	ENSMUSG00000075437	NonProperStrand	12	chr17	24665420	24665443	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-8.1632
chr2	73058729	73058819	LINE	L1Md_F2	L1	chr2L1Md_F273058375	ProperStrand	1	chr6	113038640	113038720	protein_coding	Setd5	intron	ENSMUSG00000034269	NonProperStrand	3	1	-inf
chr7	148062279	148062296	protein_coding	Sirt3	exon	ENSMUSG00000025486	ProperStrand	33	chr5	121655021	121655154	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	4	-15.4056
chr10	77512643	77512847	protein_coding	Dnmt3l	utr5	ENSMUSG00000000730	ProperStrand	37	chr11	97642952	97643014	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.3294
chr3	9602951	9603041	protein_coding	Zfp704	intron	ENSMUSG00000040209	ProperStrand	67	chr7	148634705	148634785	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-3.7795
chr12	88512012	88512029	protein_coding	Tmed8	utr3	ENSMUSG00000034111	ProperStrand	22	chr4	56910496	56910618	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-8.1142
chr6	115876313	115876330	protein_coding	Ift122	exon	ENSMUSG00000030323	ProperStrand	20	chr15	79913288	79913355	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-5.7112
chr17	53009893	53009910	protein_coding	Kcnh8	intron	ENSMUSG00000035580	ProperStrand	3	chr8	32260335	32260423	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	2	-18.0910
chr11	116713970	116713988	protein_coding	Srsf2	exon	ENSMUSG00000034120	ProperStrand	132	chr2	158185577	158185653	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	4	-15.3509
chr15	101960618	101960708	protein_coding	Spryd3	intron	ENSMUSG00000036966	ProperStrand	14	chr4	131908699	131908779	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.6665
chr19	36891651	36891670	SINE	B3A	B2	chr19B3A36891590	NonProperStrand	1	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-inf
chrX	59924855	59924945	SINE	B1_Mm	Alu	chrXB1_Mm59924851	ProperStrand	1	chrX	59924704	59924794	SINE	B1_Mus2	Alu	chrXB1_Mus259924693	ProperStrand	1	1	-inf
chr15	27494705	27497279	protein_coding	Ank	exon	ENSMUSG00000022265	ProperStrand	37	chr4	131908689	131908748	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.9439
chr1	136328174	136328264	protein_coding	Adipor1	utr3	ENSMUSG00000026457	ProperStrand	48	chr16	23111377	23111457	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.5796
chr12	108674453	108674533	LTR	MLT2D	ERVL	chr12MLT2D108674169	NonProperStrand	1	chr1	121608105	121608195	protein_coding	Ptpn4	intron	ENSMUSG00000026384	ProperStrand	7	1	-inf
chr8	74704221	74704264	protein_coding	Rab8a	utr3	ENSMUSG00000003037	ProperStrand	8	chr1	133167535	133167554	protein_coding	Ikbke	exon	ENSMUSG00000042349	NonProperStrand	3	1	-21.9894
chr5	116004264	116004280	protein_coding	Pxn	utr3	ENSMUSG00000029528	ProperStrand	171	chr12	17552967	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-3.1243
chr11	76859446	76859546	protein_coding	Ccdc55	exon	ENSMUSG00000037958	ProperStrand	4	chr1	162965540	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-8.7752
chr9	6929530	6929620	protein_coding	Dync2h1	exon	ENSMUSG00000047193	ProperStrand	40	chr16	23110914	23110996	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-3.7617
chr4	131865853	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	NonProperStrand	39	chr16	32243922	32243943	snoRNA	ENSMUSG00000080440_SNORA79	.	ENSMUSG00000080440	NonProperStrand	1	1	-inf
chr1	36161243	36161353	protein_coding	Hs6st1	utr3	ENSMUSG00000045216	ProperStrand	63	chr10	23505151	23505197	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-5.2131
chr17	27259730	27259756	protein_coding	2900010M23Rik	exon	ENSMUSG00000024208	ProperStrand	13	chr16	23110964	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.3283
chr2	26767784	26767807	snoRNA	ENSMUSG00000064829_SNORD36	.	ENSMUSG00000064829	ProperStrand	98	chr7	29136525	29136598	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.5824
chr4	131908686	131908708	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr15	82980099	82980225	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-1.5745
chr14	34780590	34780657	protein_coding	Zfp488	utr3	ENSMUSG00000044519	NonProperStrand	39	chr7	150717331	150717421	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	11	-21.5918
chr17	75790168	75790197	protein_coding	Ltbp1	utr3	ENSMUSG00000001870	ProperStrand	136	chr5	31278898	31278915	protein_coding	Tcf23	utr3	ENSMUSG00000006642	ProperStrand	3	2	-inf
chr7	28203147	28203165	protein_coding	Spnb4	intron	ENSMUSG00000011751	NonProperStrand	84	chr4	137094110	137094161	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	1	-7.4333
chr2	69722652	69722669	protein_coding	Mettl5	intron	ENSMUSG00000051730	NonProperStrand	1	chr17	39985540	39985563	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-inf
chr4	132530098	132530117	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	chr9	15119631	15119759	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	4	-1.8750
chr15	79913288	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr2	33267808	33267853	protein_coding	Zbtb34	exon	ENSMUSG00000068966	ProperStrand	9	1	-7.3434
chr10	127460866	127460956	protein_coding	Prim1	exon	ENSMUSG00000025395	ProperStrand	12	chr17	35299561	35299641	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-7.9938
chr11	97525698	97525739	protein_coding	Mllt6	intron	ENSMUSG00000038437	NonProperStrand	12	chr16	43886850	43886924	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	2	-17.7492
chr17	55960006	55982471	protein_coding	Emr4	exon	ENSMUSG00000032915	NonProperStrand	6	chr5	108334195	108334240	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-9.5107
chr15	75864621	75864637	protein_coding	K230010J24Rik	exon	ENSMUSG00000075594	ProperStrand	1	chr17	35089183	35089229	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-inf
chr1	120764544	120764589	protein_coding	Gli2	intron	ENSMUSG00000048402	ProperStrand	148	chr5	130300420	130300510	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-2.1864
chr3	94815798	94815878	protein_coding	Zfp687	exon	ENSMUSG00000019338	ProperStrand	32	chr11	6428054	6428144	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.3666
chr8	98395801	98412285	protein_coding	Got2	exon	ENSMUSG00000031672	ProperStrand	85	chr18	33954868	33954951	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-4.9920
chr12	70284972	70284989	protein_coding	Rpl36al	utr5	ENSMUSG00000049751	NonProperStrand	1	chr16	23111446	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-inf
chr6	47468267	47469136	protein_coding	Cul1	exon	ENSMUSG00000029686	ProperStrand	8	chr18	74938246	74938337	snoRNA	ENSMUSG00000089235_SCARNA17	.	ENSMUSG00000089235	ProperStrand	1128	1	-11.5792
chr7	97592311	97592401	protein_coding	Crebzf	exon	ENSMUSG00000051451	ProperStrand	24	chr18	35716762	35716842	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-6.4636
chr11	87913128	87913145	processed_transcript	2210416O15Rik	.	ENSMUSG00000087498	ProperStrand	76	chr1	64781979	64782058	protein_coding	Fzd5	exon	ENSMUSG00000045005	ProperStrand	175	2	-16.7560
chr5	100855951	100855974	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr7	88169099	88169115	protein_coding	Zfp592	exon	ENSMUSG00000005621	NonProperStrand	32	1	-7.8937
chr11	98007003	98007021	protein_coding	Fbxl20	intron	ENSMUSG00000020883	ProperStrand	23	chr17	35088971	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-7.7812
chr5	138083151	138083197	protein_coding	Sap25	utr5	ENSMUSG00000079165	ProperStrand	2	chr11	97642952	97643003	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-inf
chr4	137589474	137757849	protein_coding	Eif4g3	intron	ENSMUSG00000028760	ProperStrand	42	chr4	131865855	131865981	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	9	-inf
chr1	162968212	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	chr2	26494708	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	11	-1.7766
chr6	113647840	113647857	protein_coding	Tatdn2	exon	ENSMUSG00000056952	NonProperStrand	3	chr2	144087414	144087462	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-12.8913
chr15	98697107	98701453	protein_coding	Mll2	utr5	ENSMUSG00000048154	ProperStrand	170	chr14	33005157	33005237	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-2.1444
chr7	19661962	19661978	protein_coding	Dmwd	exon	ENSMUSG00000030410	ProperStrand	41	chr12	88778746	88778777	protein_coding	Alkbh1	intron	ENSMUSG00000079036	ProperStrand	70	1	-13.7764
chr4	144745347	144745433	protein_coding	Vps13d	exon	ENSMUSG00000020220	ProperStrand	59	chr16	23111446	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.2821
chr4	149026816	149026832	protein_coding	Pik3cd	exon	ENSMUSG00000039936	ProperStrand	151	chr15	79908964	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-3.7116
chr4	43013169	43013238	protein_coding	Vcp	utr5	ENSMUSG00000028452	ProperStrand	108	chr1	162967162	162967178	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	1	-7.5063
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr11	97642952	97643086	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	14	-12.6484
chr1	20802663	20802753	protein_coding	Mcm3	exon	ENSMUSG00000041859	ProperStrand	142	chr4	131866184	131866264	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-2.1498
chr11	48616663	48616707	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	chr4	132394334	132394417	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	2	-8.5658
chr8	38737647	38737664	protein_coding	Sgcz	intron	ENSMUSG00000039539	NonProperStrand	14	chr16	23111372	23111435	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.7143
chr6	51416536	51416591	protein_coding	Hnrnpa2b1	exon	ENSMUSG00000004980	ProperStrand	166	chr4	86232397	86232487	snoRNA	ENSMUSG00000088958_Scarna8	.	ENSMUSG00000088958	ProperStrand	366	4	-24.5413
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr8	72338488	72339346	protein_coding	Gmip	exon	ENSMUSG00000036246	ProperStrand	102	1	-7.7305
chr19	27837820	27837836	protein_coding	Rfx3	utr3	ENSMUSG00000040929	ProperStrand	92	chr5	108336363	108336406	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-4.0656
chr4	43505667	43505723	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr19	45071862	45071878	protein_coding	Sema4g	exon	ENSMUSG00000025207	ProperStrand	58	1	-3.1313
chr5	31117164	31117181	protein_coding	Mapre3	utr5	ENSMUSG00000029166	NonProperStrand	19	chr16	23111395	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.1411
chr1	162968473	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	chr7	134671401	134671463	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-1.2476
mmu-miR-706	0	15	miRNA	mmu-miR-706	.	mmu-miR-706	NonProperStrand	1	chr3	96515604	96515678	protein_coding	Polr3c	utr3	ENSMUSG00000028099	ProperStrand	16	1	-inf
chr6	125136371	125136402	protein_coding	Ncapd2	intron	ENSMUSG00000038252	ProperStrand	170	chr6	125136626	125136702	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	2	-7.3481
chr3	102856778	102858591	protein_coding	Csde1	exon	ENSMUSG00000068823	ProperStrand	122	chr17	24857815	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.2132
chr6	72387041	72387062	protein_coding	Mat2a	exon	ENSMUSG00000053907	ProperStrand	51	chr11	62416583	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-5.4833
chr16	56666120	56666136	protein_coding	Abi3bp	intron	ENSMUSG00000035258	ProperStrand	1	chr11	6428102	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-inf
chr3	8866786	8866805	protein_coding	Mrps28	intron	ENSMUSG00000040269	NonProperStrand	11	chr3	123210854	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.2109
chr5	140918169	140918321	protein_coding	Eif3b	exon	ENSMUSG00000056076	ProperStrand	66	chr1	155287307	155287355	snoRNA	ENSMUSG00000064435_SNORA4	.	ENSMUSG00000064435	ProperStrand	263	1	-10.1591
chr9	62799716	62799789	protein_coding	Pias1	exon	ENSMUSG00000032405	ProperStrand	13	chr10	110918586	110918686	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-6.4274
chr16	91029107	91029170	protein_coding	Gcfc1	intron	ENSMUSG00000022974	ProperStrand	17	chr9	120039657	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-5.7441
chr8	77643177	77644688	protein_coding	Mcm5	exon	ENSMUSG00000005410	ProperStrand	199	chr9	63868722	63868739	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	1	-6.2072
chr18	80409281	80409328	protein_coding	Gm16286	utr3	ENSMUSG00000024571	ProperStrand	15	chr2	26493366	26493420	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-6.4501
chr15	96415989	96417295	protein_coding	Slc38a1	exon	ENSMUSG00000023169	ProperStrand	69	chr1	162967519	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	3	-8.1237
chr4	155547619	155547709	protein_coding	Agrn	intron	ENSMUSG00000041936	ProperStrand	175	chr18	33954855	33954935	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-1.6827
chr4	133237432	133237452	protein_coding	Arid1a	exon	ENSMUSG00000007880	ProperStrand	465	chr18	35102297	35102351	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-2.7171
chr8	41570003	41570019	protein_coding	Zdhhc2	utr3	ENSMUSG00000039470	NonProperStrand	85	chr9	81949792	81949813	protein_coding	Mei4	intron	ENSMUSG00000043289	NonProperStrand	42	1	-13.3309
chr16	38244923	38244954	protein_coding	Gsk3b	utr3	ENSMUSG00000022812	ProperStrand	80	chr11	97642952	97643081	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	6	-12.3916
chr10	90581047	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	chr13	96100553	96100650	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	6	-5.8151
chr15	82980088	82980192	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr3	123210854	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	18	-2.3611
chr12	110889662	110889681	snoRNA	ENSMUSG00000064496_SNORD113	.	ENSMUSG00000064496	ProperStrand	37	chr10	23505152	23505252	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-5.4680
chr9	43920744	43920866	protein_coding	Rnf26	exon	ENSMUSG00000053128	ProperStrand	30	chr18	73693166	73693186	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-6.8967
chr12	87782092	87782136	protein_coding	Esrrb	intron	ENSMUSG00000021255	NonProperStrand	14	chr7	117189955	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-6.1508
chr11	100414998	100415014	protein_coding	Ttc25	exon	ENSMUSG00000006784	NonProperStrand	119	chr7	119934402	119934447	protein_coding	Tead1	intron	ENSMUSG00000055320	ProperStrand	217	1	-9.3617
chr13	9833551	9833662	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr11	97312825	97312841	protein_coding	Arhgap23	exon	ENSMUSG00000049807	NonProperStrand	7	2	-14.9821
chr8	126859949	126859965	protein_coding	Galnt2	intron	ENSMUSG00000089704	ProperStrand	5	chr11	68886972	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-9.2042
chr12	96858080	96858139	snRNA	ENSMUSG00000064412_U6	.	ENSMUSG00000064412	ProperStrand	4	chr9	15119647	15119712	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-8.0470
chr19	40654485	40654565	protein_coding	Aldh18a1	exon	ENSMUSG00000025007	ProperStrand	19	chr8	129468767	129468857	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-6.6760
chr7	31895791	31899711	protein_coding	Hpn	utr5	ENSMUSG00000001249	ProperStrand	126	chr2	32563527	32563544	protein_coding	Cdk9	exon	ENSMUSG00000009555	NonProperStrand	49	1	-12.2332
chr1	191058376	191058392	protein_coding	Kcnk2	intron	ENSMUSG00000037624	ProperStrand	56	chr5	108334196	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	3	-11.7052
chr1	72757863	72758257	protein_coding	Rpl37a	utr5	ENSMUSG00000046330	ProperStrand	94	chr17	35962405	35962716	protein_coding	Flot1	exon	ENSMUSG00000059714	ProperStrand	8	1	-16.4736
chr11	107034705	107034924	protein_coding	Nol11	exon	ENSMUSG00000018433	ProperStrand	12	chr5	73539217	73539298	protein_coding	Fryl	intron	ENSMUSG00000070733	ProperStrand	173	2	-inf
chr1	47878875	47878965	LINE	L1Md_F3	L1	chr1L1Md_F347878255	NonProperStrand	1	chr9	27399000	27399090	LINE	L1Md_F2	L1	chr9L1Md_F227398522	NonProperStrand	1	1	-inf
chr9	78023109	78023161	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr7	117189863	117189943	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	3	-1.2250
chr2	90235315	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr16	6456240	6456257	Other	RMER1C	Other	chr16RMER1C6456169	ProperStrand	7	1	-8.8025
chr4	5690428	5690446	protein_coding	Fam110b	intron	ENSMUSG00000049119	NonProperStrand	15	chr15	79908932	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-8.2499
chr2	32426796	32427911	protein_coding	Dpm2	exon	ENSMUSG00000026810	ProperStrand	7	chr5	130300519	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-6.6707
chr12	112534737	112534753	protein_coding	Cdc42bpb	intron	ENSMUSG00000021279	ProperStrand	128	chr8	109068161	109068946	protein_coding	Cdh3	exon	ENSMUSG00000061048	ProperStrand	62	1	-11.7267
chr13	22098354	22098371	protein_coding	Prss16	intron	ENSMUSG00000006179	ProperStrand	78	chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-5.9370
chr5	124801090	124801107	protein_coding	Cdk2ap1	intron	ENSMUSG00000029394	NonProperStrand	15	chr6	72278547	72278609	protein_coding	Usp39	exon	ENSMUSG00000056305	ProperStrand	16	1	-19.4575
chr7	6229070	6229087	protein_coding	Gm6792	exon	ENSMUSG00000053367	NonProperStrand	6	chr9	120038467	120038552	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-7.6033
chr7	54110423	54110496	protein_coding	Ldha	exon	ENSMUSG00000063229	ProperStrand	280	chr11	98878379	98878469	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-3.3418
chr4	141367543	141367612	protein_coding	Casp9	exon	ENSMUSG00000028914	ProperStrand	2	chr4	41150095	41150142	snoRNA	ENSMUSG00000089265_SNORD121A	.	ENSMUSG00000089265	ProperStrand	370	1	-17.1274
chr7	105270595	105270695	protein_coding	Capn5	utr3	ENSMUSG00000035547	ProperStrand	99	chr2	26768052	26768118	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	2	-11.8519
chr7	134671399	134671505	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	chr11	74718963	74719010	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	1	-3.7120
chr16	89818531	89818548	protein_coding	Tiam1	utr5	ENSMUSG00000002489	NonProperStrand	26	chr14	76247753	76247834	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-5.7966
mmu-miR-6240	2	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr8	13876097	13876231	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	2	-1.4390
chr7	13516152	13516188	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr1	174415333	174415352	protein_coding	Igsf9	intron	ENSMUSG00000037995	ProperStrand	13	1	-11.7783
chr1	84720951	84721051	protein_coding	Trip12	utr3	ENSMUSG00000026219	ProperStrand	248	chrX	130619733	130619769	protein_coding	Cstf2	utr3	ENSMUSG00000031256	ProperStrand	26	1	-12.1595
chr4	43505787	43505867	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr13	49805006	49805096	protein_coding	Iars	exon	ENSMUSG00000037851	ProperStrand	95	1	-2.2736
chr13	39052372	39052388	protein_coding	Slc35b3	utr5	ENSMUSG00000021432	ProperStrand	27	chr9	15121076	15121111	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	1	-11.3211
chr8	109192977	109193004	protein_coding	Cdh1	utr3	ENSMUSG00000000303	ProperStrand	283	chr15	57952509	57952554	protein_coding	Atad2	exon	ENSMUSG00000022360	ProperStrand	47	1	-10.6962
chr11	5737813	5737830	protein_coding	Polm	utr5	ENSMUSG00000020474	NonProperStrand	19	chr3	68889091	68889215	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-5.4553
chr14	15572354	15572371	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr4	56819129	56819147	protein_coding	BC026590	utr3	ENSMUSG00000038827	NonProperStrand	50	1	-11.6506
chr16	11753769	11753786	protein_coding	Snx29	intron	ENSMUSG00000071669	NonProperStrand	38	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-8.1168
chr9	65044377	65044456	snRNA	ENSMUSG00000075763_U5	.	ENSMUSG00000075763	ProperStrand	216	chr6	71832594	71832684	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	12	-19.4983
chr11	23321282	23321311	protein_coding	Usp34	exon	ENSMUSG00000056342	ProperStrand	68	chr3	153574576	153574653	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	4	-19.0387
chr4	148326556	148326687	protein_coding	Casz1	utr3	ENSMUSG00000028977	ProperStrand	27	chr19	8963065	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.6995
chr9	64022874	64022923	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	chr3	108357255	108357443	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	2	-0.9883
chr5	77738902	77738918	protein_coding	Noa1	exon	ENSMUSG00000036285	ProperStrand	147	chr1	162966813	162966829	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-4.5177
chr4	130305566	130305620	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	chr8	129468780	129468799	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-1.4732
chr11	120488424	120488482	protein_coding	Mafg	utr3	ENSMUSG00000051510	ProperStrand	23	chr17	24857718	24857808	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.0279
chr1	40738899	40738915	protein_coding	Slc9a2	exon	ENSMUSG00000026062	ProperStrand	13	chr15	79913300	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-6.5816
chr9	50816824	50816841	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	chr4	69998582	70010182	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	1	-6.6192
chr4	43505698	43505788	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr10	93352327	93352359	protein_coding	Metap2	exon	ENSMUSG00000036112	ProperStrand	78	5	-11.9818
chr2	90235315	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	25437958	25437976	LTR	MTD	MaLR	chr10MTD25437785	ProperStrand	1	1	-inf
chr7	134985361	134985472	protein_coding	Stx4a	utr5	ENSMUSG00000030805	ProperStrand	2	chr12	29316012	29316029	protein_coding	Rps7	exon	ENSMUSG00000061477	ProperStrand	129	2	-inf
chr6	148879168	148879250	protein_coding	Fam60a	intron	ENSMUSG00000039985	ProperStrand	68	chr10	63552101	63552119	protein_coding	Lrrtm3	exon	ENSMUSG00000042846	ProperStrand	63	1	-12.9647
chr7	135148242	135148260	protein_coding	Trim72	exon	ENSMUSG00000042828	ProperStrand	24	chr18	73693108	73693136	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-7.3454
chr18	63238392	63238408	protein_coding	Fam38b	exon	ENSMUSG00000041482	NonProperStrand	50	chr4	131908689	131908771	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.4812
chr14	55057856	55057872	protein_coding	Mmp14	exon	ENSMUSG00000000957	ProperStrand	61	chr9	15118245	15118265	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.4363
chr3	94571124	94573096	protein_coding	Cgn	exon	ENSMUSG00000068876	ProperStrand	14	chr7	29136619	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.0758
chr14	31998225	31998502	protein_coding	Nisch	exon	ENSMUSG00000021910	ProperStrand	125	chrX	71194571	71194616	protein_coding	Hcfc1	exon	ENSMUSG00000031386	ProperStrand	424	1	-7.9301
chr2	26493366	26493476	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr10	23505545	23505621	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	5	-1.3747
chr4	24555744	24555770	protein_coding	Klhl32	intron	ENSMUSG00000040387	ProperStrand	67	chr11	69481335	69481433	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.0022
chr10	12654226	12654244	LINE	Lx8	L1	chr10Lx812654202	NonProperStrand	1	chr15	36538098	36538144	protein_coding	Pabpc1	exon	ENSMUSG00000022283	NonProperStrand	5	1	-inf
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr11	94201541	94201659	protein_coding	Ankrd40	utr3	ENSMUSG00000020864	ProperStrand	11	1	-11.2504
chr2	119630508	119631368	protein_coding	Tyro3	exon	ENSMUSG00000027298	ProperStrand	35	chr3	68889086	68889164	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	2	-7.1450
chr17	24555463	24555511	protein_coding	Rnps1	exon	ENSMUSG00000034681	ProperStrand	40	chr2	130101269	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-7.3987
chr5	148113281	148113297	protein_coding	Cdx2	utr3	ENSMUSG00000029646	ProperStrand	276	chr5	108336363	108336408	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-2.1171
chr7	133592210	133592226	protein_coding	Atp2a1	exon	ENSMUSG00000030730	ProperStrand	49	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-8.9995
chr12	31180582	31180604	Low_complexity	GA-rich	Low_complexity	chr12GA-rich31180493	ProperStrand	1	chr19	8799021	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-inf
chr13	19684241	19684258	protein_coding	Epdr1	utr3	ENSMUSG00000002808	ProperStrand	46	chr1	18204299	18204315	pseudogene	Defb44-ps	.	ENSMUSG00000070977	ProperStrand	37	1	-14.8352
chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	chr11	106544199	106544226	protein_coding	Pecam1	exon	ENSMUSG00000020717	ProperStrand	56	1	-9.4085
chr8	106942360	106942376	protein_coding	Dync1li2	utr3	ENSMUSG00000035770	ProperStrand	75	chr8	3603659	3603732	protein_coding	Camsap3	exon	ENSMUSG00000044433	ProperStrand	86	1	-12.1415
chr11	77996555	77996619	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	chr3	153574635	153574654	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	2	-4.6711
chr4	53873597	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	chr19	8963016	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	4	-0.7273
chr3	90303010	90303051	protein_coding	2500003M10Rik	utr3	ENSMUSG00000001017	ProperStrand	28	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-9.6941
chr6	40354722	40354812	protein_coding	E330009J07Rik	utr3	ENSMUSG00000037172	ProperStrand	6	chr1	72272872	72272952	snRNA	ENSMUSG00000075752_U2	.	ENSMUSG00000075752	ProperStrand	535	1	-13.6927
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr7	38354919	38354935	protein_coding	Zfp536	exon	ENSMUSG00000043456	NonProperStrand	236	1	-7.6919
chr3	100726559	100726577	protein_coding	Trim45	utr5	ENSMUSG00000033233	ProperStrand	59	chr11	62416951	62416972	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-6.0762
chr16	90799765	90799845	protein_coding-noncoding	Urb1	utr3	ENSMUSG00000039929	ProperStrand	1	chr16	90799661	90799751	protein_coding	Urb1	intron	ENSMUSG00000039929	ProperStrand	71	1	-inf
chr2	25079701	25079734	protein_coding	Tubb4b	exon	ENSMUSG00000036752	ProperStrand	58	chr4	131908356	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.4677
chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	chr15	86327484	86327500	protein_coding	Tbc1d22a	utr3	ENSMUSG00000051864	NonProperStrand	5	1	-13.9919
chr8	108294528	108294618	protein_coding	Ranbp10	utr3	ENSMUSG00000037415	ProperStrand	13	chr11	97642997	97643077	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-5.3468
chr5	131952680	131952770	protein_coding	Auts2	utr5	ENSMUSG00000029673	ProperStrand	71	chr7	116663655	116663735	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.2277
chr18	10911852	10911942	SINE	B4A	B4	chr18B4A10911690	NonProperStrand	1	chr18	10912122	10912212	SINE	ID	ID	chr18ID10912137	ProperStrand	1	1	-inf
chr14	60998023	60998039	protein_coding	Fam123a	exon	ENSMUSG00000021986	ProperStrand	13	chr19	24199067	24199116	protein_coding	Tjp2	exon	ENSMUSG00000024812	ProperStrand	63	1	-16.3547
chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	chr5	24215723	24215747	protein_coding	Nub1	utr3	ENSMUSG00000028954	ProperStrand	32	1	-10.4768
chr5	99007642	99007659	protein_coding	1700007G11Rik	intron	ENSMUSG00000057816	ProperStrand	10	chr11	6428088	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-6.6888
chr2	119597558	119598238	protein_coding	Rpap1	exon	ENSMUSG00000034032	ProperStrand	96	chr16	23110545	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.6998
chr16	37777391	37777408	protein_coding	Fstl1	exon	ENSMUSG00000022816	ProperStrand	179	chr9	120037898	120038029	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-2.6919
chr19	56006040	56006057	protein_coding	Tcf7l2	utr3	ENSMUSG00000024985	NonProperStrand	22	chr7	117190025	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-5.2455
chr3	96218671	96218751	misc_RNA	Telomerase-vert	.	ENSMUSG00000064796	ProperStrand	443	chr14	56449389	56450535	protein_coding	Nfatc4	exon	ENSMUSG00000023411	ProperStrand	16	1	-11.9947
chr3	102869723	102869785	protein_coding	Nras	utr3	ENSMUSG00000027852	ProperStrand	8	chr1	162965548	162965568	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-11.8335
chr8	75281558	75281628	protein_coding	Sin3b	utr3	ENSMUSG00000031622	ProperStrand	66	chr7	128791525	128791541	protein_coding	Usp31	utr3	ENSMUSG00000063317	NonProperStrand	5	1	-17.9842
chr1	135285746	135285764	protein_coding	Sox13	intron	ENSMUSG00000070643	NonProperStrand	12	chr4	131908810	131908872	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.9639
chr4	132806030	132806131	protein_coding	Map3k6	exon	ENSMUSG00000028862	NonProperStrand	28	chr8	13416895	13416912	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-7.9776
chr12	92559992	92560082	protein_coding	4930534B04Rik	intron	ENSMUSG00000061533	ProperStrand	14	chr16	23111694	23111774	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-7.6262
chr5	30116226	30116306	SINE	B3	B2	chr5B330116168	ProperStrand	1	chr11	75314061	75314269	protein_coding	Prpf8	utr3	ENSMUSG00000020850	ProperStrand	255	1	-inf
chr2	26493391	26493491	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr13	23528209	23528284	tRNA	tRNA103-LysCTT	.	635323	ProperStrand	180	1	-1.8375
chr9	65127126	65127142	protein_coding	Cilp	exon	ENSMUSG00000042254	ProperStrand	212	chr11	6428141	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.1633
chr13	99083701	99086201	protein_coding	Btf3	exon	ENSMUSG00000021660	ProperStrand	64	chr16	23111374	23111448	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-3.6409
chr2	179322377	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr2	181316563	181316579	protein_coding	Uckl1	exon	ENSMUSG00000089917	ProperStrand	142	1	-9.4841
chr17	71992087	71992134	protein_coding	Wdr43	exon	ENSMUSG00000041057	ProperStrand	70	chr2	158182156	158182194	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	3	-11.1855
chr9	63042015	63042031	protein_coding	Map2k5	exon	ENSMUSG00000058444	ProperStrand	193	chr5	121655127	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-1.7339
chr2	179992507	179992539	protein_coding	Rps21	exon	ENSMUSG00000039001	ProperStrand	46	chr7	52381722	52381773	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	2	-12.9393
chr6	88790724	88790742	protein_coding	Abtb1	exon	ENSMUSG00000030083	ProperStrand	5	chr9	110282242	110282258	protein_coding	Scap	exon	ENSMUSG00000032485	ProperStrand	37	1	-18.7245
chr10	128062319	128062358	protein_coding	Rps26	exon	ENSMUSG00000025362	ProperStrand	67	chr19	8799860	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-4.7340
chr2	180424001	180424156	protein_coding	Dido1	exon	ENSMUSG00000038914	ProperStrand	81	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-7.1083
chr9	108514079	108516144	protein_coding	Arih2	exon	ENSMUSG00000064145	ProperStrand	9	chr16	23110457	23110537	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-6.0870
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr9	123763783	123763799	protein_coding	Xcr1	utr3	ENSMUSG00000060509	NonProperStrand	40	1	-8.5524
chr10	39615988	39616023	LTR	MTC-int	MaLR	chr10MTC-int39615621	ProperStrand	7	chr19	8798752	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-9.1562
chr11	115864754	115864770	protein_coding	Itgb4	exon	ENSMUSG00000020758	ProperStrand	8	chr17	35286291	35286313	protein_coding	Prrc2a	exon	ENSMUSG00000024393	ProperStrand	315	1	-14.1184
chr12	81911559	81911647	protein_coding	4933426M11Rik	intron	ENSMUSG00000021133	ProperStrand	23	chr11	69483172	69483262	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.1990
chr10	57927921	57928213	protein_coding	Ranbp2	exon	ENSMUSG00000003226	ProperStrand	52	chr7	133939164	133939264	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	1	-8.6274
chr6	122691350	122691390	protein_coding	Slc2a3	intron	ENSMUSG00000003153	ProperStrand	682	chr9	64143836	64143875	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-3.0965
chr7	29484725	29484792	SINE	PB1D7	Alu	chr7PB1D729484696	NonProperStrand	1	chr14	76247801	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-inf
chr2	179322380	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr5	105869249	105869265	protein_coding	Lrrc8b	intron	ENSMUSG00000070639	NonProperStrand	11	1	-14.6741
chr7	148643304	148643343	protein_coding	Pnpla2	exon	ENSMUSG00000025509	ProperStrand	13	chr9	15119704	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-9.1426
chr12	87847322	87847402	protein_coding	Esrrb	exon	ENSMUSG00000021255	ProperStrand	254	chr6	52165758	52165774	protein_coding	Hoxa7	exon	ENSMUSG00000038236	ProperStrand	28	1	-11.9607
chr2	129998654	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr14	76247729	76247819	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	7	-5.3885
chr11	68067261	68067277	protein_coding	Ntn1	intron	ENSMUSG00000020902	NonProperStrand	194	chr8	126571110	126571127	protein_coding	Urb2	exon	ENSMUSG00000031976	ProperStrand	64	1	-10.8293
chr5	130321405	130321495	protein_coding	Cct6a	intron	ENSMUSG00000029447	ProperStrand	128	chr15	98350204	98350283	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	6	-17.5229
chr19	30220163	30248987	protein_coding	Gldc	exon	ENSMUSG00000024827	ProperStrand	175	chr16	23111743	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-2.9806
chr11	87240282	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	chr7	29136559	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	5	-5.0431
chrX	99381802	99381889	protein_coding	Rps4x	exon	ENSMUSG00000031320	ProperStrand	139	chr13	49779692	49779782	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-5.3615
chr3	157675748	157675806	protein_coding	Srsf11	exon	ENSMUSG00000055436	ProperStrand	46	chr7	117189954	117190044	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.8238
chr11	82692475	82692491	protein_coding	Rad51l3	exon	ENSMUSG00000018841	ProperStrand	112	chr8	108415249	108415397	protein_coding	Edc4	exon	ENSMUSG00000036270	ProperStrand	34	1	-13.2058
chr2	180639344	180639447	protein_coding	Ythdf1	utr3	ENSMUSG00000038848	ProperStrand	59	chr12	83497648	83497666	protein_coding	Sipa1l1	exon	ENSMUSG00000042700	ProperStrand	84	1	-12.6729
chr10	125447989	125448043	protein_coding	Lrig3	exon	ENSMUSG00000020105	ProperStrand	40	chr8	23763839	23763856	protein_coding	Polb	utr5	ENSMUSG00000031536	ProperStrand	23	1	-16.0424
chr17	56826430	56849812	protein_coding	Ranbp3	intron	ENSMUSG00000002372	ProperStrand	34	chr4	131908236	131908456	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-6.2555
chr19	41083705	41083723	SINE	B3A	B2	chr19B3A41083596	NonProperStrand	5	chr10	59413414	59413463	protein_coding	Ddit4	exon	ENSMUSG00000020108	ProperStrand	49	1	-19.0385
chr5	114581184	114581269	protein_coding	Ung	utr5	ENSMUSG00000029591	ProperStrand	20	chr16	23110530	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.4825
chr8	97380694	97380711	LTR	RMER10B	ERVL	chr8RMER10B97380431	ProperStrand	2	chr4	131908753	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-8.0336
chr11	99091514	99091532	protein_coding-noncoding	Smarce1	utr3	ENSMUSG00000037935	NonProperStrand	17	chr19	37343697	37343757	protein_coding	Ide	utr3	ENSMUSG00000056999	ProperStrand	19	1	-18.1299
chr6	86319828	86319886	protein_coding	Fam136a	utr3	ENSMUSG00000057497	ProperStrand	3	chr16	23111777	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-inf
chr8	86461651	86462295	protein_coding	Lphn1	exon	ENSMUSG00000013033	ProperStrand	221	chr17	24856657	24856737	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-3.9105
chr18	67471590	67471641	protein_coding	Impa2	intron	ENSMUSG00000024525	ProperStrand	31	chr18	35716814	35716883	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	5	-14.5419
chr15	102161800	102161890	protein_coding	Pfdn5	utr3	ENSMUSG00000001289	ProperStrand	6	chr17	24857717	24857797	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-6.7526
chr4	55431650	55431668	lincRNA	Gm12505	exon	ENSMUSG00000087070	ProperStrand	447	chr11	62416578	62416638	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-2.9577
chr2	35055412	35055492	protein_coding-noncoding	Rab14	utr3	ENSMUSG00000026878	ProperStrand	2	chr2	35055229	35055319	protein_coding	Rab14	intron	ENSMUSG00000026878	ProperStrand	21	1	-inf
chr9	57493277	57493293	protein_coding	Csk	utr5	ENSMUSG00000032312	ProperStrand	17	chr5	29928768	29928847	protein_coding	Ube3c	exon	ENSMUSG00000039000	ProperStrand	48	2	-20.3630
chr19	4011183	4011224	protein_coding	Ndufv1	utr5	ENSMUSG00000037916	ProperStrand	7	chr5	121655016	121655063	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-8.0440
chr8	126552268	126553750	protein_coding	Urb2	exon	ENSMUSG00000031976	ProperStrand	64	chr4	131908688	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-6.8619
chr8	69976415	69976505	LTR	RLTR13B2	ERVK	chr8RLTR13B269976254	ProperStrand	1	chr17	6449519	6449599	protein_coding	Tmem181b-ps	intron	ENSMUSG00000079733	ProperStrand	9	1	-inf
chr9	72566049	72591349	protein_coding	Nedd4	exon	ENSMUSG00000032216	ProperStrand	308	chr11	69483136	69483272	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	4	-2.2119
chr16	4911327	4911402	protein_coding	Mgrn1	exon	ENSMUSG00000022517	ProperStrand	14	chr7	29136525	29136595	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.0758
chr14	8702369	8705895	protein_coding	Flnb	exon	ENSMUSG00000025278	ProperStrand	124	chr1	162967495	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-2.2020
chr8	113447131	113447171	protein_coding	St3gal2	intron	ENSMUSG00000031749	ProperStrand	206	chr1	88247800	88247835	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-2.8017
chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr8	129468746	129468868	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	13	-14.6089
chrX	72214248	72214264	protein_coding-noncoding	Gab3	utr3	ENSMUSG00000032750	ProperStrand	420	chr15	36526727	36538254	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	2	-6.8397
chr7	86244450	86244468	protein_coding	Acan	exon	ENSMUSG00000030607	ProperStrand	38	chr11	106362638	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-8.3192
chr17	28329974	28330051	protein_coding	Zfp523	intron	ENSMUSG00000024220	ProperStrand	26	chr10	80641723	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	8	-20.8154
chr5	24796400	24796585	protein_coding	Mll3	exon	ENSMUSG00000038056	ProperStrand	31	chr5	147644721	147644743	protein_coding	Rpl21	utr5	ENSMUSG00000041453	ProperStrand	112	1	-13.3967
chr1	55138542	55138585	protein_coding	Hspd1	exon	ENSMUSG00000025980	ProperStrand	140	chr1	162965998	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-3.7983
chr11	100581379	100581396	protein_coding	Rab5c	utr5	ENSMUSG00000019173	ProperStrand	76	chr2	27303247	27303270	protein_coding	Brd3	utr3	ENSMUSG00000026918	ProperStrand	85	1	-12.1379
chr5	33369554	33369570	protein_coding	Ywhah	exon	ENSMUSG00000018965	ProperStrand	81	chr15	79747487	79747550	protein_coding	Cbx7	utr3	ENSMUSG00000053411	ProperStrand	62	1	-12.6460
chr13	23622209	23622227	lincRNA	Gm11335	intron	ENSMUSG00000085016	ProperStrand	20	chr10	76757469	76757557	protein_coding	Adarb1	utr3	ENSMUSG00000020262	ProperStrand	15	1	-18.3325
chr12	73922987	73923004	LTR	RMER5	ERV1	chr12RMER573922948	NonProperStrand	24	chr10	80993891	80993926	protein_coding	Gna11	exon	ENSMUSG00000034781	ProperStrand	23	1	-16.9445
chr11	74855461	74867294	protein_coding	Smg6	exon	ENSMUSG00000038290	ProperStrand	29	chr16	23110830	23110874	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0921
chrX	102569259	102569275	lincRNA	5330434G04Rik	exon	ENSMUSG00000087620	ProperStrand	29	chr5	130711435	130711485	protein_coding	0610007L01Rik	intron	ENSMUSG00000053094	ProperStrand	39	1	-15.6470
chr10	67350731	67350811	protein_coding	Zfp365	utr3	ENSMUSG00000037855	ProperStrand	9	chrX	34622931	34623021	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-6.8852
chr9	35021084	35021383	protein_coding	Srpr	exon	ENSMUSG00000032042	ProperStrand	54	chr16	23111761	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-3.7410
chr5	127737478	127737494	antisense	1700085B03Rik	.	ENSMUSG00000087104	ProperStrand	55	chr11	6428088	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.3504
chr2	118456713	118458202	protein_coding	Bub1b	exon	ENSMUSG00000040084	ProperStrand	45	chr16	23110931	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-2.1851
chr2	90235294	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	15118523	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	4	-4.9704
chr7	152048239	152048701	protein_coding	Fgf4	exon	ENSMUSG00000050917	ProperStrand	66	chr7	17022744	17022781	protein_coding	Zc3h4	utr3	ENSMUSG00000059273	ProperStrand	95	1	-12.1981
chr7	148340518	148340572	protein_coding	Ptdss2	exon	ENSMUSG00000025495	ProperStrand	29	chrX	71517931	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	2	-12.7983
chr13	55397367	55397388	protein_coding	Nsd1	exon	ENSMUSG00000021488	ProperStrand	186	chr7	4759920	4760006	protein_coding	Ube2s	exon	ENSMUSG00000060860	ProperStrand	62	3	-inf
chr16	37384897	37384913	protein_coding	Stxbp5l	utr5	ENSMUSG00000022829	ProperStrand	332	chr3	130406394	130406410	protein_coding	Ostc	exon	ENSMUSG00000041084	ProperStrand	10	1	-13.5498
chr19	53082307	53082324	protein_coding	Xpnpep1	intron	ENSMUSG00000025027	NonProperStrand	58	chr5	121655097	121655146	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.8108
chr1	184844280	184844360	LINE	L1ME2z	L1	chr1L1ME2z184844230	ProperStrand	1	chr2	33452814	33452904	protein_coding	Lmx1b	intron	ENSMUSG00000038765	NonProperStrand	5	1	-inf
chr4	117941801	117941891	protein_coding	Ptprf	exon	ENSMUSG00000033295	ProperStrand	337	chr19	8800392	8800473	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	19	-inf
chr9	96082810	96082827	protein_coding	Gk5	utr3	ENSMUSG00000041440	ProperStrand	7	chr6	71832550	71832602	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-9.9932
chr1	188562659	188562759	protein_coding-noncoding	Rrp15	utr3	ENSMUSG00000001305	ProperStrand	3	chr15	79913288	79913352	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-9.8112
chr9	90435632	90435651	LINE	Lx9	L1	chr9Lx990435553	ProperStrand	1	chr4	131865855	131865911	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr17	69766399	69766489	lincRNA	A930029G22Rik	exon	ENSMUSG00000085144	ProperStrand	3	chr3	68889057	68889137	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-9.4435
chr8	87359562	87359722	protein_coding	Rad23a	exon	ENSMUSG00000003813	ProperStrand	10	chr11	6428076	6428166	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-6.6888
chr17	25859834	25860211	protein_coding	Chtf18	exon	ENSMUSG00000019214	ProperStrand	38	chr18	37967809	37967852	protein_coding	Pcdhga9	exon	ENSMUSG00000023036	ProperStrand	245	1	-11.4141
chr16	34357475	34360910	protein_coding	Kalrn	exon	ENSMUSG00000061751	NonProperStrand	52	chr14	31827479	31827549	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	4	-19.6203
chr7	88186459	88186475	protein_coding	Zfp592	exon	ENSMUSG00000005621	NonProperStrand	32	chr7	52382755	52382832	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-8.0087
chr10	79591826	79591885	protein_coding-noncoding	Stk11	utr3	ENSMUSG00000003068	ProperStrand	3	chr11	97850235	97850267	tRNA	tRNA1432-CysGCA	.	3431	ProperStrand	31	3	-inf
chr18	60936057	60936080	protein_coding	Rps14	exon	ENSMUSG00000024608	ProperStrand	154	chr2	173603712	173603760	protein_coding	Vapb	utr3	ENSMUSG00000054455	ProperStrand	29	1	-12.8935
chr13	114683324	114683379	protein_coding	Arl15	intron	ENSMUSG00000042348	ProperStrand	51	chr9	64024976	64024998	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	2	-14.9879
chr2	180472364	180473127	protein_coding	Slc17a9	exon	ENSMUSG00000023393	ProperStrand	7	chr19	8963081	8963181	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-6.3961
chr5	31501994	31502047	protein_coding	Zfp513	exon	ENSMUSG00000043059	ProperStrand	16	chr9	120037910	120037979	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	2	-11.8354
chr4	128141750	128141772	protein_coding	Csmd2	intron	ENSMUSG00000028804	ProperStrand	19	chr8	13416895	13416912	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-8.7651
chr8	11199681	11199720	protein_coding	Col4a1	utr3	ENSMUSG00000031502	ProperStrand	64	chr10	23505152	23505275	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	7	-10.8723
chr5	149801889	149801916	processed_transcript	Gm15406	.	ENSMUSG00000085237	NonProperStrand	1	chr18	35714144	35714257	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	NonProperStrand	47	1	-inf
chr15	97897282	97906245	protein_coding	Senp1	exon	ENSMUSG00000033075	ProperStrand	24	chr19	8798739	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	2	-10.7128
chr12	85768099	85768116	protein_coding	2900006K08Rik	exon	ENSMUSG00000057265	NonProperStrand	1	chr15	79913330	79913352	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-inf
mmu-miR-5100	5	20	miRNA	mmu-miR-5100	.	mmu-miR-5100	ProperStrand	132	chr3	123210878	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-3.0371
chr11	97489600	97489617	protein_coding	E130012A19Rik	exon	ENSMUSG00000043439	NonProperStrand	110	chr18	73693168	73693191	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-4.3551
chr5	77738902	77738918	protein_coding	Noa1	exon	ENSMUSG00000036285	ProperStrand	147	chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	1	-9.8875
chr19	43579408	43579425	protein_coding	Got1	intron	ENSMUSG00000025190	NonProperStrand	147	chr2	32818540	32818564	protein_coding	Rpl12	exon	ENSMUSG00000038900	ProperStrand	167	1	-9.4622
chr9	115163015	115163055	protein_coding	Stt3b	exon	ENSMUSG00000032437	ProperStrand	66	chr19	8799036	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	2	-9.2222
chr17	23952377	23952512	protein_coding	Srrm2	exon	ENSMUSG00000039218	ProperStrand	521	chr7	52381972	52381996	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-2.6277
chr4	4694402	4694467	protein_coding	Impad1	utr3	ENSMUSG00000066324	ProperStrand	23	chr16	23111372	23111462	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.7951
chr2	91118746	91118764	protein_coding	1110051M20Rik	utr3	ENSMUSG00000040591	ProperStrand	4	chr16	23110856	23111454	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.6489
chr12	88784893	88788527	protein_coding	1810035L17Rik	exon	ENSMUSG00000021040	ProperStrand	1	chr1	39605591	39605624	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-inf
chr6	56708628	56708646	protein_coding	Avl9	utr3	ENSMUSG00000029787	NonProperStrand	2	chr8	129468770	129468860	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-11.7864
chr17	80604173	80606522	protein_coding	Srsf7	intron	ENSMUSG00000024097	ProperStrand	31	chr7	148634704	148634832	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	4	-16.3743
chr8	10592076	10592093	protein_coding	Myo16	intron	ENSMUSG00000039057	NonProperStrand	45	chr9	15119632	15119730	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.1394
chr17	26644593	26644612	protein_coding	Dusp1	exon	ENSMUSG00000024190	ProperStrand	16	chr4	131908692	131908752	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-5.8984
chr13	9833578	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr2	128437161	128437230	protein_coding	Anapc1	utr3	ENSMUSG00000014355	ProperStrand	38	1	-5.8476
chr16	91628758	91628833	protein_coding	Gart	exon	ENSMUSG00000022962	ProperStrand	200	chr13	49779716	49779802	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-4.6606
chr9	64025589	64025771	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	chr5	130295414	130295477	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	4	-5.2851
chr2	118873189	118873279	protein_coding	Casc5	utr5	ENSMUSG00000027326	ProperStrand	30	chr9	15119338	15119418	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-6.4740
chr12	12946861	12946951	protein_coding	Mycn	exon	ENSMUSG00000037169	ProperStrand	24	chr16	23111389	23111469	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.7195
chr17	35044728	35044755	protein_coding	Ehmt2	exon	ENSMUSG00000013787	ProperStrand	42	chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	1	-10.1631
chr7	52381850	52382121	protein_coding	Rpl13a	exon	ENSMUSG00000074129	ProperStrand	269	chr1	162965986	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-1.1473
chr4	122969043	122970127	protein_coding	Pabpc4	exon	ENSMUSG00000011257	ProperStrand	85	chr8	125014755	125014813	protein_coding	Fam38a	exon	ENSMUSG00000014444	ProperStrand	132	1	-11.0300
chr19	23140045	23140062	lincRNA	C330002G04Rik	intron	ENSMUSG00000087169	ProperStrand	34	chr5	108336363	108336491	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-5.9928
chr2	127054828	127054857	protein_coding	Snrnp200	exon	ENSMUSG00000003660	ProperStrand	203	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-2.9318
chr17	13184995	13185013	protein_coding	Wtap	utr5	ENSMUSG00000060475	ProperStrand	119	chr11	77996557	77996586	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-4.7591
chr17	35281241	35281309	protein_coding	Bag6	exon	ENSMUSG00000024392	ProperStrand	181	chr18	35714172	35714290	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	3	-4.5547
chr8	32239596	32239612	protein_coding	Rnf122	utr3	ENSMUSG00000039328	NonProperStrand	42	chr4	131908809	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.7439
chr11	48617788	48619077	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	chr10	23505559	23505621	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-4.1305
chr2	90235293	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	76220527	76220543	protein_coding	Timm22	utr5	ENSMUSG00000020843	ProperStrand	4	1	-10.0500
chr10	80848647	80848664	protein_coding	Dohh	exon	ENSMUSG00000078440	ProperStrand	26	chr7	29136525	29136610	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.8707
chr12	111902825	111902925	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr11	106362670	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-2.8583
chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	1	-5.8760
chr9	14393381	14393425	protein_coding	Amotl1	intron	ENSMUSG00000013076	ProperStrand	72	chr7	106628073	106628176	snoRNA	ENSMUSG00000064966_Snord15b	.	ENSMUSG00000064966	ProperStrand	74	1	-12.5253
chr5	143197618	143197709	protein_coding	Slc29a4	utr3	ENSMUSG00000050822	ProperStrand	14	chr8	59991434	59991450	protein_coding	Hmgb2	exon	ENSMUSG00000054717	NonProperStrand	96	1	-15.3309
chr12	31989509	31989599	protein_coding	Lamb1	exon	ENSMUSG00000002900	ProperStrand	87	chr17	24857738	24857818	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.7007
chr14	12999286	12999361	protein_coding	Ptprg	exon	ENSMUSG00000021745	ProperStrand	72	chr3	123210854	123210872	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-3.2627
chr10	79138266	79138282	protein_coding	Gm16517	exon	ENSMUSG00000020308	ProperStrand	43	chr10	41275557	41275576	protein_coding	Ccdc162	intron	ENSMUSG00000075225	ProperStrand	6	1	-18.4763
chr8	73419657	73419682	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	chr16	18240817	18240917	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	4	-2.0089
chr4	106111701	106111717	protein_coding	Usp24	utr3	ENSMUSG00000028514	ProperStrand	74	chr7	105241579	105241630	protein_coding	Myo7a	intron	ENSMUSG00000030761	NonProperStrand	33	1	-14.0971
chr15	79248656	79248707	protein_coding	Csnk1e	utr3	ENSMUSG00000022433	ProperStrand	59	chr5	132213625	132213642	protein_coding	Auts2	intron	ENSMUSG00000029673	ProperStrand	71	1	-13.0109
chr8	74432512	74432529	protein_coding	Zfp882	utr5	ENSMUSG00000089857	NonProperStrand	12	chr7	67123696	67123728	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	1	-12.8216
chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	chr5	108336363	108336409	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-1.3683
chr11	43153515	43153536	LTR	MLT1G3	MaLR	chr11MLT1G343153482	NonProperStrand	1	chr11	77995188	77995230	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-inf
chr6	56828314	56828392	protein_coding	Fkbp9	utr3	ENSMUSG00000029781	ProperStrand	39	chr18	35716812	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.9102
chr6	93636797	93644019	protein_coding	Magi1	exon	ENSMUSG00000045095	ProperStrand	106	chr19	8800358	8800438	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	5	-11.6397
chr4	44025625	44039826	protein_coding	Clta	utr5	ENSMUSG00000028478	ProperStrand	59	chr16	23110879	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	7	-5.8924
chr4	116743646	116743726	protein_coding	Eif2b3	utr3	ENSMUSG00000028683	ProperStrand	7	chr11	6428076	6428166	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-7.4403
chr11	80415108	80415125	protein_coding	Myo1d	exon	ENSMUSG00000035441	ProperStrand	144	chr6	71832577	71832687	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-3.9320
chr5	150025157	150025173	protein_coding	Uspl1	exon	ENSMUSG00000041264	NonProperStrand	33	chr4	149615209	149616254	protein_coding	Eno1	exon	ENSMUSG00000063524	ProperStrand	432	1	-10.5657
chr14	118207600	118207618	protein_coding	Gpc6	intron	ENSMUSG00000058571	ProperStrand	28	chr2	26494708	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.5336
chr2	28615509	28665190	protein_coding	Ak8	exon	ENSMUSG00000026807	ProperStrand	12	chr8	98269959	98269993	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	5	-20.4488
chr14	76247711	76247842	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	chr10	110918547	110918693	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	28	-0.7519
chr11	59589412	59589463	protein_coding	Mprip	utr3	ENSMUSG00000005417	ProperStrand	58	chr4	131865413	131865459	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-4.0661
chr19	60845909	60847004	protein_coding	Eif3a	exon	ENSMUSG00000024991	ProperStrand	287	chr5	149146117	149146153	protein_coding	Slc7a1	exon	ENSMUSG00000041313	ProperStrand	65	1	-10.0155
chr7	148627694	148627794	protein_coding-noncoding	Lrdd	utr3	ENSMUSG00000025507	ProperStrand	1	chr10	23505152	23505193	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-inf
chr5	139747924	139748014	protein_coding	Adap1	utr3	ENSMUSG00000056413	ProperStrand	16	chr14	33005056	33005136	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-6.5846
chr17	35299562	35299646	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	chr14	31827477	31827502	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	4	-1.4197
chr8	96703171	96703783	protein_coding	Mt1	utr5	ENSMUSG00000031765	ProperStrand	92	chr10	23505178	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-2.4837
chr19	9952693	9952863	protein_coding	Incenp	exon	ENSMUSG00000024660	ProperStrand	111	chr11	55296310	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-4.9791
chr11	77972309	77972399	protein_coding-noncoding	Traf4	utr3	ENSMUSG00000017386	ProperStrand	2	chr17	24857717	24857797	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-9.4368
chr3	95462964	95465226	protein_coding	Mcl1	utr3	ENSMUSG00000038612	ProperStrand	75	chr18	35716764	35716854	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-3.3176
chr10	79223785	79224222	protein_coding	Rnf126	exon	ENSMUSG00000035890	ProperStrand	30	chr16	23110902	23110982	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0481
chr11	95823022	95823084	protein_coding	Igf2bp1	utr3	ENSMUSG00000013415	ProperStrand	140	chr1	162967520	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-2.0047
chr12	114370146	114371431	protein_coding	Mta1	exon	ENSMUSG00000021144	ProperStrand	74	chr4	132530098	132530116	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	2	-14.5487
chr13	73952691	73952781	protein_coding	Slc12a7	utr3	ENSMUSG00000017756	ProperStrand	80	chr7	29136563	29136643	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.8942
chr4	106076625	106111770	protein_coding	Usp24	exon	ENSMUSG00000028514	ProperStrand	74	chr4	131865938	131865987	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-2.7386
chr14	19066434	19066514	protein_coding	Nr1d2	intron	ENSMUSG00000021775	NonProperStrand	2	chr14	19421360	19421450	pseudogene	RP23-152I2.1	.	ENSMUSG00000093760	NonProperStrand	1	1	-inf
chr16	11144153	11144226	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr7	116663632	116663732	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	NonProperStrand	51	2	-16.9275
chr3	51068804	51068879	protein_coding	Elf2	exon	ENSMUSG00000037174	ProperStrand	21	chr19	8963028	8963052	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.1775
chr11	107048167	107048195	protein_coding	Nol11	exon	ENSMUSG00000018433	ProperStrand	12	chr7	147130197	147130266	protein_coding	Utf1	exon	ENSMUSG00000047751	ProperStrand	67	1	-16.3203
chr2	80297373	80297389	LINE	L1MB8	L1	chr2L1MB880297262	ProperStrand	53	chr7	116663633	116663697	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.7266
chr12	111932371	111932453	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr4	9435874	9441744	protein_coding	Asph	exon	ENSMUSG00000028207	ProperStrand	14	2	-17.9642
chr9	15130746	15130900	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	chr3	68889025	68889189	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	5	-3.3565
chr10	126971721	126971738	Low_complexity	GC_rich	Low_complexity	chr10GC_rich126971723	NonProperStrand	4	chr14	33005138	33005236	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	4	-inf
chr7	90162395	90162412	LINE	L1MB3	L1	chr7L1MB390161566	ProperStrand	12	chr11	69478258	69478298	protein_coding	Cd68	exon	ENSMUSG00000018774	ProperStrand	12	1	-19.9071
chr8	60437146	60437162	protein_coding	Galntl6	exon	ENSMUSG00000061864	ProperStrand	44	chr15	98350146	98350237	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	5	-inf
chr9	103950068	103950086	protein_coding	Uba5	intron	ENSMUSG00000032557	ProperStrand	111	chr17	39985356	39985398	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-4.7363
chr3	100371505	100371547	protein_coding	Man1a2	utr3	ENSMUSG00000008763	ProperStrand	18	chr11	69481432	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-9.0699
chr16	23111908	23113268	protein_coding	Eif4a2	exon	ENSMUSG00000022884	ProperStrand	356	chr7	117189981	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	5	-4.6981
chr9	120039532	120039557	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	chr9	95524996	95525035	snoRNA	ENSMUSG00000065346_SNORA4	.	ENSMUSG00000065346	ProperStrand	142	1	-1.8468
chr5	21168361	21168379	protein_coding	Armc10	utr3	ENSMUSG00000038525	ProperStrand	61	chr4	116826700	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	2	-10.8884
chr6	40342667	40342701	protein_coding	Agk	exon	ENSMUSG00000029916	ProperStrand	6	chr1	16093299	16093346	protein_coding	Rpl7	exon	ENSMUSG00000043716	ProperStrand	93	1	-17.0255
chr2	180468487	180468577	protein_coding	Slc17a9	intron	ENSMUSG00000023393	ProperStrand	7	chr2	158182217	158182297	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-9.3654
chr2	121129761	121129851	protein_coding	Mtap1a	exon	ENSMUSG00000027254	ProperStrand	17	chr4	131908728	131908808	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.3002
chr3	107245963	107246043	protein_coding	Kcnc4	intron	ENSMUSG00000027895	ProperStrand	4	chr1	89681308	89681398	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-11.0679
chr2	18904544	18904634	protein_coding	Pip4k2a	intron	ENSMUSG00000026737	ProperStrand	6	chr10	90581115	90581195	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-9.4975
chr13	74498064	74498084	protein_coding	Ccdc127	utr3	ENSMUSG00000021578	ProperStrand	12	chr15	34370545	34370625	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-6.6995
chr5	147808167	147808187	LTR	MLT2B3	ERVL	chr5MLT2B3147808136	ProperStrand	1	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-inf
chr19	44378252	44378286	protein_coding	Scd2	utr3	ENSMUSG00000025203	ProperStrand	219	chr11	98572312	98572391	snoRNA	ENSMUSG00000088169_SNORD124	.	ENSMUSG00000088169	ProperStrand	62	2	-16.7612
chr15	81306471	81306520	protein_coding	Rbx1	utr3	ENSMUSG00000022400	ProperStrand	78	chr2	26768372	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-5.0907
chr4	118954924	118954999	protein_coding	Ybx1	exon	ENSMUSG00000028639	ProperStrand	171	chr8	32260336	32260400	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-2.7023
chr3	95672973	95673073	protein_coding	Mrps21	intron	ENSMUSG00000054312	ProperStrand	2	chr10	110918675	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-10.7503
chr11	33060385	33060879	protein_coding	Npm1	exon	ENSMUSG00000057113	ProperStrand	352	chr1	63225679	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-3.2807
chr9	45198910	45199663	protein_coding	Fxyd6	exon	ENSMUSG00000066705	ProperStrand	30	chr17	24665444	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	2	-10.2421
chr1	178665908	178666008	protein_coding	Cep170	exon	ENSMUSG00000057335	ProperStrand	21	chr9	120038609	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.0221
chr2	132630986	132631053	protein_coding	Trmt6	utr3	ENSMUSG00000037376	ProperStrand	2	chr10	23505545	23505597	protein_coding	Rps12	intron	ENSMUSG00000061983	ProperStrand	309	1	-17.7802
chr9	24549587	24549633	protein_coding	Tbx20	intron	ENSMUSG00000031965	NonProperStrand	110	chr2	26494747	26494837	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.0664
chr7	133726521	133726538	protein_coding	Cln3	exon	ENSMUSG00000030720	ProperStrand	87	chr8	73419705	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.4781
chr15	76284375	76284462	protein_coding	Bop1	exon	ENSMUSG00000022557	ProperStrand	26	chr16	23111374	23111464	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-4.5661
chr19	3362199	3362215	protein_coding	Cpt1a	exon	ENSMUSG00000024900	NonProperStrand	4	chr5	92485141	92485218	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	2	-inf
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr8	87543731	87548078	protein_coding	Asna1	exon	ENSMUSG00000052456	ProperStrand	25	1	-10.0821
chr2	150412753	150412769	protein_coding	2310001A20Rik	exon	ENSMUSG00000033096	ProperStrand	8	chr2	130102048	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-9.4448
chr2	154689369	154689560	protein_coding	Raly	exon	ENSMUSG00000027593	ProperStrand	116	chr2	181316563	181316579	protein_coding	Uckl1	exon	ENSMUSG00000089917	ProperStrand	142	1	-10.2603
chr13	90238282	90238344	protein_coding	Tmem167	intron	ENSMUSG00000012422	ProperStrand	11	chr7	116664819	116664909	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-9.5428
chr2	57176783	57176800	protein_coding	Gpd2	intron	ENSMUSG00000026827	NonProperStrand	2	chr19	8798484	8798550	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-12.6199
chr8	74008400	74008417	protein_coding	Ano8	exon	ENSMUSG00000034863	NonProperStrand	171	chr8	13876096	13876212	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	2	-8.3650
chr11	8407342	8407358	protein_coding	Tns3	intron	ENSMUSG00000020422	ProperStrand	81	chr15	80798144	80799100	protein_coding	Adsl	exon	ENSMUSG00000022407	ProperStrand	11	1	-16.1466
chr9	105657516	105657534	protein_coding	Col6a6	intron	ENSMUSG00000043719	NonProperStrand	5	chr11	6428102	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-8.1751
chr13	96472017	96472033	protein_coding	F2rl2	utr3	ENSMUSG00000021675	ProperStrand	2	chr1	75133038	75133128	protein_coding	1810031K17Rik	exon	ENSMUSG00000033159	NonProperStrand	3	1	-inf
chr7	94395299	94395373	protein_coding	Nox4	exon	ENSMUSG00000030562	ProperStrand	4	chr8	4210840	4210857	protein_coding	BC068157	exon	ENSMUSG00000064125	NonProperStrand	7	1	-inf
chr19	5800397	5800456	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr7	52382237	52382288	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	4	-9.6025
chr13	15672370	15672391	protein_coding	Gli3	intron	ENSMUSG00000021318	ProperStrand	54	chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-6.6630
chr14	122366766	122366789	protein_coding	Ubac2	intron	ENSMUSG00000041765	ProperStrand	25	chr9	120039537	120039619	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-4.9793
chr12	85350481	85350499	protein_coding	Acot1	utr5	ENSMUSG00000072949	ProperStrand	72	chr8	129468746	129468833	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-4.0680
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-3.8864
mmu-miR-6240	3	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	2	-3.8800
chr3	129571414	129571430	protein_coding	Cfi	exon	ENSMUSG00000058952	ProperStrand	4	chr15	34370614	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-9.0741
chr13	11853640	11862156	protein_coding	Ryr2	exon	ENSMUSG00000021313	ProperStrand	61	chr5	74489598	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-3.7472
chr1	16092838	16093385	protein_coding	Rpl7	exon	ENSMUSG00000043716	ProperStrand	93	chr4	131908686	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-1.4465
chr4	122970424	122970524	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	NonProperStrand	6	chr10	23506278	23506347	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	NonProperStrand	2	1	-inf
chr5	115983444	115983460	protein_coding	Pxn	intron	ENSMUSG00000029528	ProperStrand	171	chr1	162968441	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-4.0586
chr11	98884180	98884214	protein_coding	Top2a	exon	ENSMUSG00000020914	ProperStrand	324	chr11	69482351	69482400	snoRNA	ENSMUSG00000089542_snoU6-77	.	ENSMUSG00000089542	ProperStrand	138	2	-13.1631
chr5	28403994	28404015	protein_coding	Insig1	utr3	ENSMUSG00000045294	ProperStrand	35	chr11	6428076	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	4	-13.6105
chr3	90016877	90016958	protein_coding	Rps27	exon	ENSMUSG00000090733	ProperStrand	40	chr8	113366285	113366312	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	2	-15.7975
chr2	91436228	91436335	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	chr1	39605591	39605626	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-1.9170
chr18	38488135	38488167	protein_coding	Gnpda1	utr3	ENSMUSG00000052102	ProperStrand	16	chr17	24857717	24857807	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.7325
chr3	107415823	107415881	protein_coding	Fam40a	utr3	ENSMUSG00000014601	ProperStrand	18	chr1	162966830	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	2	-13.8538
chr2	130853027	130853060	protein_coding	Atrn	utr3	ENSMUSG00000027312	ProperStrand	16	chr6	114260511	114260527	protein_coding	Slc6a1	exon	ENSMUSG00000030310	NonProperStrand	147	1	-14.2053
chr11	120207971	120208020	protein_coding	Actg1	exon	ENSMUSG00000062825	ProperStrand	178	chrX	34622906	34622948	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-1.3871
chr6	94613947	94649500	protein_coding	Lrig1	exon	ENSMUSG00000030029	ProperStrand	26	chr10	110918562	110918642	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-5.0402
chr18	84488736	84488836	protein_coding	Zfp407	intron	ENSMUSG00000048410	ProperStrand	34	chr14	33005145	33005186	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-5.0835
chr4	22414139	22414155	protein_coding	Pou3f2	exon	ENSMUSG00000052621	NonProperStrand	90	chr5	121655031	121655101	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.0079
chr18	74380894	74380941	protein_coding	Cxxc1	utr3	ENSMUSG00000024560	ProperStrand	44	chr9	78326560	78326592	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	2	-11.2014
chr14	31826494	31826510	protein_coding	Gnl3	exon	ENSMUSG00000042354	NonProperStrand	59	chr4	131908809	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.2467
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr4	131865856	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.1639
chr13	24566579	24566616	protein_coding	Cmah	utr3	ENSMUSG00000016756	NonProperStrand	53	chr17	30772308	30772324	protein_coding	Dnahc8	utr5	ENSMUSG00000033826	ProperStrand	246	1	-10.7341
chr10	80257846	80257946	protein_coding	Dot1l	utr3	ENSMUSG00000061589	ProperStrand	48	chr1	162967784	162967806	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	1	-10.6967
chr9	108400870	108400897	protein_coding	Usp19	exon	ENSMUSG00000006676	ProperStrand	57	chr7	116663637	116663710	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.6000
chr16	22059699	22059799	protein_coding	Igf2bp2	utr3	ENSMUSG00000033581	ProperStrand	23	chrX	34622905	34622975	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-4.9855
chr16	5009256	5009581	protein_coding	Rogdi	utr3	ENSMUSG00000022540	ProperStrand	7	chr3	123210877	123210951	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-6.1463
chr9	72773679	72773695	protein_coding	Pygo1	utr5	ENSMUSG00000034910	NonProperStrand	2	chr7	65654679	65654768	tRNA	tRNA337-GluTTC	.	268468	ProperStrand	13	1	-inf
chr19	41845271	41845288	protein_coding	Arhgap19	intron	ENSMUSG00000025154	NonProperStrand	3	chr2	26494771	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-9.2771
chr11	101466266	101466350	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	chr7	117166721	117166757	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	2	-2.0598
chr17	29856078	29856099	SINE	B3	B2	chr17B329856052	ProperStrand	1	chr7	116664820	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-inf
chr10	93581603	93581623	protein_coding	Fgd6	intron	ENSMUSG00000020021	NonProperStrand	3	chr11	69481335	69481415	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-15.7180
chr12	17285657	17285737	protein_coding	Pdia6	exon	ENSMUSG00000020571	ProperStrand	114	chr2	26494708	26494798	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.0088
chr3	96218403	96218493	misc_RNA	Telomerase-vert	.	ENSMUSG00000064796	ProperStrand	443	chr11	62416575	62416650	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-1.6096
chr5	115940330	115940406	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	chr8	129468789	129468879	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-0.7235
chr6	3794656	3794673	SINE	B4A	B4	chr6B4A3794525	NonProperStrand	26	chr18	33954817	33954907	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-5.1001
chr17	34052328	34052418	protein_coding	Daxx	utr3	ENSMUSG00000002307	ProperStrand	26	chr11	116938559	116938639	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-7.8289
chr1	78663581	78663671	protein_coding	Utp14b	utr3	ENSMUSG00000079470	ProperStrand	8	chr17	26360449	26360529	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	1	-14.1696
chr5	100804279	100807855	protein_coding	Sec31a	exon	ENSMUSG00000035325	ProperStrand	61	chr8	124409899	124410263	protein_coding	Slc7a5	exon	ENSMUSG00000040010	ProperStrand	166	2	-17.5376
chr1	53983262	53983278	protein_coding	Hecw2	exon	ENSMUSG00000042807	ProperStrand	39	chr11	62416955	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-6.8974
chr6	97141144	97141183	protein_coding	Uba3	exon	ENSMUSG00000030061	ProperStrand	37	chr17	24857717	24857807	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-5.4240
chr19	5719336	5719352	protein_coding	Ehbp1l1	exon	ENSMUSG00000024937	ProperStrand	75	chr7	148634697	148634783	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-3.5704
chr15	78893027	78893044	protein_coding	Ankrd54	exon	ENSMUSG00000033055	NonProperStrand	4	chr2	130102051	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-10.9807
chr5	75473198	75473215	protein_coding	Gsx2	utr3	ENSMUSG00000035946	ProperStrand	307	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-3.9604
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr11	69163957	69164077	protein_coding	Chd3	intron	ENSMUSG00000018474	ProperStrand	438	5	-inf
chr19	3602388	3602405	protein_coding	Lrp5	exon	ENSMUSG00000024913	ProperStrand	145	chr3	90197173	90197671	protein_coding	Ints3	exon	ENSMUSG00000027933	ProperStrand	87	1	-10.7953
chr18	37673599	37673615	protein_coding	Pcdhb21	exon	ENSMUSG00000044022	NonProperStrand	23	chr16	23111372	23111413	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.7951
chr13	93480136	93480205	protein_coding	Serinc5	utr3	ENSMUSG00000021703	ProperStrand	57	chr7	116663681	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.6000
chr4	21797544	21798592	protein_coding	Sfrs18	exon	ENSMUSG00000028248	NonProperStrand	26	chr1	89673606	89673696	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-4.8439
chr3	103766705	103766721	protein_coding	Rsbn1	utr3	ENSMUSG00000044098	NonProperStrand	17	chr18	33954853	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-9.7437
chr13	30228504	30228520	protein_coding	Mboat1	utr5	ENSMUSG00000038732	ProperStrand	3	chr3	123210929	123210967	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-8.0648
chr1	133079961	133079979	protein_coding	Rassf5	intron	ENSMUSG00000026430	ProperStrand	73	chr9	53378940	53378957	protein_coding	Npat	exon	ENSMUSG00000033054	ProperStrand	20	2	-21.2646
chr1	42936992	42937010	protein_coding	Mrps9	intron	ENSMUSG00000060679	ProperStrand	26	chr11	106362640	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	2	-14.4350
chrX	109662523	109662539	protein_coding	2010106E10Rik	intron	ENSMUSG00000025528	ProperStrand	2	chr2	165880020	165880070	protein_coding	Ncoa3	exon	ENSMUSG00000027678	ProperStrand	58	1	-inf
chr18	12172461	12172477	protein_coding	6030446N20Rik	intron	ENSMUSG00000049411	ProperStrand	235	chr5	151755614	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-5.0545
chr8	125026120	125026185	protein_coding	Fam38a	utr5	ENSMUSG00000014444	ProperStrand	132	chr17	13112491	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-3.1126
chrX	96245892	96263264	protein_coding	Stard8	intron	ENSMUSG00000031216	ProperStrand	142	chr16	23111392	23111492	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-0.7866
chr9	21635962	21636052	protein_coding	Dock6	exon	ENSMUSG00000032198	ProperStrand	155	chr9	35313156	35313198	protein_coding	Cdon	utr3	ENSMUSG00000038119	ProperStrand	33	5	-19.9605
chr16	57391760	57391792	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr3	123210854	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	13	-2.1419
chr2	117031784	117031802	LINE	L1MC1	L1	chr2L1MC1117031436	ProperStrand	1	chr8	73419661	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-inf
chr9	50955469	50955487	SINE	MIRm	MIR	chr9MIRm50955455	NonProperStrand	1	chr16	56697639	56697678	protein_coding	Tfg	exon	ENSMUSG00000022757	ProperStrand	5	1	-inf
chr9	110290125	110290178	protein_coding	Ptpn23	exon	ENSMUSG00000036057	ProperStrand	34	chr1	162968442	162968494	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-7.2080
chr12	67695347	67695437	protein_coding	Mdga2	intron	ENSMUSG00000034912	NonProperStrand	5	chr6	36799411	36799501	protein_coding	Dgki	intron	ENSMUSG00000038665	ProperStrand	22	1	-19.2349
chr8	98761374	98761464	SINE	MIRb	MIR	chr8MIRb98761361	NonProperStrand	1	chr8	98761674	98761754	Simple_repeat	(CA)n	Simple_repeat	chr8(CA)n98761524	NonProperStrand	1	1	-inf
chr13	21988862	21988884	miRNA	Mir1983	.	ENSMUSG00000088148	ProperStrand	23	chr2	91436275	91436335	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	3	-19.6172
mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr10	30320342	30320358	protein_coding	Trmt11	intron	ENSMUSG00000019792	NonProperStrand	26	1	-7.5698
chr7	52382097	52382425	protein_coding	Rpl13a	exon	ENSMUSG00000074129	ProperStrand	269	chr19	8963087	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-0.8218
chr9	37439721	37439811	protein_coding	Siae	intron	ENSMUSG00000001942	NonProperStrand	2	chr11	106675273	106675353	protein_coding	Ccdc45	intron	ENSMUSG00000018372	NonProperStrand	1	1	-inf
chr18	37673599	37673615	protein_coding	Pcdhb21	exon	ENSMUSG00000044022	NonProperStrand	23	chr7	116663633	116663710	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.2677
chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr6	45965480	46120177	protein_coding	Cntnap2	exon	ENSMUSG00000039419	NonProperStrand	283	1	-3.4795
chr14	120916405	120916495	LTR	IAPLTR2b	ERVK	chr14IAPLTR2b120916174	ProperStrand	1	chr12	76215116	76215206	protein_coding	Kcnh5	intron	ENSMUSG00000034402	ProperStrand	4	1	-inf
chr7	16677708	16678201	protein_coding	Zfp541	exon	ENSMUSG00000078796	ProperStrand	33	chr17	24857778	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	4	-11.4235
chr2	28048645	28048692	protein_coding	Olfm1	utr5	ENSMUSG00000026833	ProperStrand	3	chr7	116663672	116663762	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-8.5982
chr7	87260056	87260146	protein_coding	Idh2	exon	ENSMUSG00000030541	ProperStrand	21	chr3	101396443	101398144	protein_coding	Atp1a1	exon	ENSMUSG00000033161	ProperStrand	316	1	-12.1117
chr4	9620099	9620116	SINE	B4	B4	chr4B49620055	ProperStrand	1	chr5	130528308	130528356	protein_coding	Crcp	intron	ENSMUSG00000025532	ProperStrand	6	1	-inf
chr18	68025366	68026116	protein_coding	Cep192	exon	ENSMUSG00000024542	ProperStrand	59	chr7	52381719	52381748	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-7.6077
chr15	8084101	8084680	protein_coding	Nup155	exon	ENSMUSG00000022142	NonProperStrand	8	chr11	6428058	6428148	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	NonProperStrand	91	2	-18.8830
chr13	112505975	112505992	protein_coding	Mier3	utr3	ENSMUSG00000032727	ProperStrand	11	chr8	73419657	73419712	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-6.4238
chr1	192712615	192712631	protein_coding	Rps6kc1	exon	ENSMUSG00000089872	ProperStrand	241	chr2	26494773	26494825	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-0.9402
chr14	45949538	45949554	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	chr11	97643009	97643078	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-0.7171
chr7	148634701	148634801	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	chr19	25016725	25016792	snoRNA	ENSMUSG00000064896_SNORA19	.	ENSMUSG00000064896	ProperStrand	88	1	-3.2780
chr2	119593383	119593474	protein_coding	Rpap1	exon	ENSMUSG00000034032	ProperStrand	96	chr7	134671386	134671466	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-6.9367
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr3	153575112	153575168	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	1	-2.3911
chr2	158185549	158185655	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr7	148634721	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	13	-5.1236
chr13	34978668	34978685	protein_coding	Prpf4b	exon	ENSMUSG00000021413	ProperStrand	50	chr8	129468756	129468846	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-4.7636
chr11	35853255	35853271	protein_coding	Odz2	exon	ENSMUSG00000049336	ProperStrand	106	chr2	29925855	29926040	protein_coding	Set	exon	ENSMUSG00000054766	ProperStrand	167	1	-10.1165
chr11	84042523	84045163	protein_coding	Acaca	exon	ENSMUSG00000020532	ProperStrand	100	chr10	80260705	80260834	protein_coding	Plekhj1	exon	ENSMUSG00000035278	ProperStrand	6	2	-20.1864
chr6	8671715	8671752	protein_coding	Ica1	intron	ENSMUSG00000062995	ProperStrand	13	chr3	123210854	123210894	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-8.1561
chr3	138557379	138557459	protein_coding	Tspan5	exon	ENSMUSG00000028152	ProperStrand	19	chr11	69483142	69483232	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	4	-14.7849
chr14	46149666	46149689	protein_coding	Fermt2	utr5	ENSMUSG00000037712	ProperStrand	23	chr4	131908236	131908300	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.9964
chr18	41356150	41356185	miRNA	Mir5097	dead	ENSMUSG00000093361	ProperStrand	221	chr11	100764986	100765031	protein_coding	Stat3	exon	ENSMUSG00000004040	ProperStrand	20	1	-12.9270
chr2	130732309	130732328	protein_coding	Atrn	exon	ENSMUSG00000027312	ProperStrand	16	chr16	23111456	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.4608
chr11	120135327	120135375	protein_coding	Bahcc1	exon	ENSMUSG00000039741	ProperStrand	118	chr12	66273472	66273490	protein_coding	Mis18bp1	utr5	ENSMUSG00000047534	ProperStrand	4	1	-17.6699
chr1	182064476	182064506	protein_coding	Cdc42bpa	exon	ENSMUSG00000026490	ProperStrand	24	chr11	6428087	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-8.1718
chr16	32680686	32683106	protein_coding	Tnk2	exon	ENSMUSG00000022791	ProperStrand	86	chr16	23110914	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-0.7496
chr2	25915656	25915672	protein_coding	Nacc2	exon	ENSMUSG00000026932	ProperStrand	98	chr8	113366285	113366354	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	1	-8.1978
chr3	84995363	84995380	protein_coding	Arfip1	intron	ENSMUSG00000074513	NonProperStrand	56	chr2	26494781	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.2316
chr1	4857592	4868113	protein_coding	Tcea1	exon	ENSMUSG00000033813	ProperStrand	24	chr10	90581034	90581135	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	3	-15.1606
chr13	54848608	54848624	protein_coding	Gprin1	intron	ENSMUSG00000069227	ProperStrand	55	chr2	139504270	139504288	protein_coding	Ism1	utr5	ENSMUSG00000074766	ProperStrand	8	1	-17.3253
chr14	68633742	68633760	LTR	MTE2a	MaLR	chr14MTE2a68633723	ProperStrand	3	chr7	116663633	116663710	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-8.5982
chr2	90235295	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	80122895	80122913	SINE	ID_B1	B4	chr10ID_B180122890	ProperStrand	1	1	-inf
chr4	155545030	155545086	protein_coding	Agrn	exon	ENSMUSG00000041936	ProperStrand	175	chr7	29136525	29136553	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-2.7353
chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr6	131330313	131330424	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	ProperStrand	408	6	-5.2218
chrX	12858830	12858910	protein_coding	Ddx3x	intron	ENSMUSG00000000787	ProperStrand	67	chr8	42426910	42427000	protein_coding	Asah1	utr3	ENSMUSG00000031591	ProperStrand	5	1	-17.9464
chr11	95435756	95439304	protein_coding	Ngfr	exon	ENSMUSG00000000120	ProperStrand	31	chr4	131908817	131908871	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.2342
chr1	191476461	191476551	protein_coding	Cenpf	exon	ENSMUSG00000026605	ProperStrand	44	chr17	24857717	24857797	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.8314
chr12	60235064	60235154	snoRNA	ENSMUSG00000077505_SNORA26	.	ENSMUSG00000077505	ProperStrand	82	chr7	29136550	29136630	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.8552
chr11	88401474	88401502	protein_coding	Msi2	intron	ENSMUSG00000069769	ProperStrand	159	chr4	53873600	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	1	-7.1025
chr14	66093252	66093268	LTR	MLT1A1	MaLR	chr14MLT1A166093179	ProperStrand	31	chr19	8800084	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-8.9344
chr4	43596607	43596658	protein_coding	Rgp1	utr3	ENSMUSG00000028468	ProperStrand	22	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-8.9418
chr17	56553240	56553416	protein_coding	Ptprs	exon	ENSMUSG00000013236	ProperStrand	152	chr4	3512882	3512935	protein_coding	Tgs1	exon	ENSMUSG00000028233	ProperStrand	10	1	-15.1128
chr3	89847699	89848808	protein_coding	Ubap2l	exon	ENSMUSG00000042520	ProperStrand	88	chr11	68887042	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	2	-5.8467
chr17	34747537	34747555	protein_coding	Agpat1	exon	ENSMUSG00000034254	NonProperStrand	39	chr4	116826748	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-7.6409
chr4	132456928	132456972	protein_coding	Fam76a	utr3	ENSMUSG00000028878	ProperStrand	5	chr11	77995191	77995257	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	3	-20.0154
chr11	40565788	40565807	protein_coding	Ccng1	exon	ENSMUSG00000020326	ProperStrand	30	chr11	106362638	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-8.7960
chr15	99548653	99548669	protein_coding	Gpd1	exon	ENSMUSG00000023019	ProperStrand	40	chr18	73693171	73693188	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-6.3230
chr9	24549608	24549631	protein_coding	Tbx20	intron	ENSMUSG00000031965	NonProperStrand	110	chrX	139151778	139151872	protein_coding	Tmem164	intron	ENSMUSG00000047045	ProperStrand	13	1	-15.2144
chr13	31936258	31936280	protein_coding	Gmds	intron	ENSMUSG00000038372	ProperStrand	27	chr10	23505152	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-6.6517
chr5	33653934	33653967	LTR	ORR1B2	MaLR	chr5ORR1B233653788	ProperStrand	1	chr11	42440243	42440259	protein_coding	Gabrb2	exon	ENSMUSG00000007653	ProperStrand	248	1	-inf
chr1	75447246	75447262	protein_coding	Accn4	utr5	ENSMUSG00000033007	NonProperStrand	23	chr5	14252800	14252816	protein_coding	Sema3e	utr3	ENSMUSG00000063531	ProperStrand	125	1	-13.7812
chr18	35750527	35750580	protein_coding	Matr3	utr3	ENSMUSG00000037236	ProperStrand	90	chr7	116663634	116663724	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.8450
chr19	25601154	25601171	protein_coding	Dmrt1	intron	ENSMUSG00000024837	ProperStrand	20	chr9	58499095	58499122	protein_coding	Nptn	exon	ENSMUSG00000032336	ProperStrand	25	1	-17.2438
chr4	116875204	116875250	snRNA	ENSMUSG00000070228_U5	.	ENSMUSG00000070228	ProperStrand	131	chr7	118219575	118219612	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	3	-7.0984
chr2	26221425	26221510	protein_coding	Snapc4	exon	ENSMUSG00000036281	ProperStrand	19	chr4	131865851	131865951	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-9.4466
chr7	73254951	73255041	protein_coding	Chsy1	exon	ENSMUSG00000032640	ProperStrand	25	chr9	120039566	120039646	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-4.9793
chr8	42359500	42379113	protein_coding	Pcm1	exon	ENSMUSG00000031592	ProperStrand	57	chr16	23110910	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	10	-10.9309
chr7	54443887	54443919	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	chr17	24665420	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-1.7504
chr8	113262369	113262424	protein_coding	Mtss1l	exon	ENSMUSG00000033763	ProperStrand	12	chr19	8800114	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-10.8797
chr18	22553365	22553387	protein_coding	Asxl3	intron	ENSMUSG00000045215	ProperStrand	9	chr16	23110454	23110492	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-6.0870
chr12	88778665	88778745	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	chr13	90238632	90238722	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	1	-2.1582
chr5	31916531	31916550	protein_coding-noncoding	Mrpl33	utr5	ENSMUSG00000029142	ProperStrand	4	chr15	44359313	44359329	protein_coding	Pkhd1l1	exon	ENSMUSG00000038725	ProperStrand	2	1	-inf
chr2	37502726	37502742	protein_coding	Strbp	utr5	ENSMUSG00000026915	ProperStrand	90	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-5.7924
chr17	57143354	57143427	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	ProperStrand	29	chr1	182865340	182865397	protein_coding	Lefty1	exon	ENSMUSG00000038793	ProperStrand	28	7	-inf
chr2	93633270	93633286	protein_coding	Ext2	intron	ENSMUSG00000027198	ProperStrand	49	chr17	23955820	23955838	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	1	-11.8837
chr4	131908236	131908440	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	chr2	166888977	166889056	snoRNA	ENSMUSG00000077515_SNORD12	.	ENSMUSG00000077515	ProperStrand	191	4	-1.7029
chr10	21717177	21717737	protein_coding	Sgk1	exon	ENSMUSG00000019970	ProperStrand	55	chr4	53873577	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	1	-9.2197
chr18	10052133	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr10	40599918	40599934	protein_coding	Cdc40	intron	ENSMUSG00000038446	ProperStrand	34	2	-15.6830
chr1	63212880	63215854	protein_coding	Ndufs1	exon	ENSMUSG00000025968	ProperStrand	14	chr13	90238641	90238665	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	1	-11.6051
chr9	15118204	15118254	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	chr1	102076756	102076794	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	1	-5.8640
chr3	121381031	121381048	protein_coding	4930432M17Rik	intron	ENSMUSG00000074248	NonProperStrand	33	chr18	35714142	35714263	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-7.6156
chr9	120037899	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	chr8	113362431	113362512	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	4	-5.3371
chr6	142980116	142980144	protein_coding	5730419I09Rik	exon	ENSMUSG00000030279	ProperStrand	81	chr16	23111777	23111837	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-2.7278
chr16	95016193	95016283	protein_coding	Kcnj6	intron	ENSMUSG00000043301	NonProperStrand	16	chr16	96539746	96539826	protein_coding	B3galt5	utr3	ENSMUSG00000074892	NonProperStrand	2	1	-inf
chr17	45705279	45705374	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chrX	113862540	113862571	snoRNA	ENSMUSG00000088518_SNORA9	.	ENSMUSG00000088518	ProperStrand	280	1	-3.7568
chr7	28261515	28261532	protein_coding	Sertad3	exon	ENSMUSG00000055200	NonProperStrand	7	chr11	62418037	62418075	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-9.9378
chr6	125313194	125313212	protein_coding	Plekhg6	exon	ENSMUSG00000038167	ProperStrand	3	chr14	31827480	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	2	-22.3022
chr7	13613055	13613085	protein_coding	Trim28	exon	ENSMUSG00000005566	ProperStrand	296	chr10	42298355	42298372	protein_coding	Nr2e1	intron	ENSMUSG00000019803	ProperStrand	32	1	-11.3839
chr15	88877267	88877357	protein_coding	Mov10l1	exon	ENSMUSG00000015365	ProperStrand	22	chrX	34622908	34622988	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-5.0729
chrX	98278210	98278267	protein_coding	Slc7a3	exon	ENSMUSG00000031297	ProperStrand	8	chr10	23505152	23505178	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.7871
chr7	28146782	28146798	protein_coding	Spnb4	exon	ENSMUSG00000011751	NonProperStrand	84	chr11	69483190	69483247	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.8963
chr15	82052296	82052313	protein_coding	Tnfrsf13c	utr3	ENSMUSG00000068105	NonProperStrand	4	chr9	15118323	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-8.9841
chr2	69808283	69809191	protein_coding	Ubr3	exon	ENSMUSG00000044308	ProperStrand	62	chr7	109149323	109149403	protein_coding	Numa1	exon	ENSMUSG00000066306	ProperStrand	148	1	-11.4350
chr8	73363101	73363118	protein_coding	Arrdc2	exon	ENSMUSG00000002910	ProperStrand	13	chr16	23111691	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.6795
chr2	158457348	158457365	protein_coding	Actr5	exon	ENSMUSG00000037761	NonProperStrand	94	chr2	26494708	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-4.1297
chr6	113504012	113504031	protein_coding	Fancd2	intron	ENSMUSG00000034023	ProperStrand	65	chr10	23506324	23506348	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-6.7885
chr13	99629728	99629779	protein_coding	Tnpo1	exon	ENSMUSG00000009470	ProperStrand	56	chr8	74147861	74147893	protein_coding	Glt25d1	utr3	ENSMUSG00000034807	ProperStrand	36	2	-19.5735
chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	chr18	77174221	77174237	protein_coding	Ier3ip1	intron	ENSMUSG00000090000	ProperStrand	7	1	-15.0562
chr9	7184819	7184841	protein_coding	Dcun1d5	exon	ENSMUSG00000032002	ProperStrand	3	chr9	43948493	43948510	protein_coding	Mcam	exon	ENSMUSG00000032135	NonProperStrand	2	1	-inf
chrX	103395619	103395675	protein_coding	Pgk1	exon	ENSMUSG00000062070	ProperStrand	484	chr15	98350146	98350229	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	2	-2.2835
chr17	46794746	46794963	protein_coding	Cul7	exon	ENSMUSG00000038545	ProperStrand	38	chr1	162965531	162965588	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.1263
chr19	44378876	44380049	protein_coding	Scd2	utr3	ENSMUSG00000025203	ProperStrand	219	chr2	158182156	158182291	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	4	-9.2574
chr15	68012520	68012536	protein_coding	Zfat	exon	ENSMUSG00000022335	NonProperStrand	25	chr14	76247758	76247777	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-5.8745
chr3	104673647	104673692	protein_coding	St7l	intron	ENSMUSG00000045576	ProperStrand	19	chr8	81712072	81713574	protein_coding	Zfp827	exon	ENSMUSG00000071064	NonProperStrand	28	1	-17.0467
chr2	121949510	121949526	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	chr6	131330317	131330411	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	ProperStrand	408	1	-6.4820
chr3	157197433	157208052	protein_coding	Zranb2	exon	ENSMUSG00000028180	ProperStrand	43	chr16	23110907	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.3514
chr18	12692470	12692487	protein_coding	Lama3	exon	ENSMUSG00000024421	ProperStrand	20	chr2	144087316	144087449	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	3	-19.4834
chr15	81560306	81560322	protein_coding	Rangap1	utr5	ENSMUSG00000022391	NonProperStrand	35	chr8	13416895	13416912	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-7.5284
chr17	29108912	29108930	protein_coding	Stk38	utr3	ENSMUSG00000024006	ProperStrand	57	chr1	137662713	137662804	protein_coding	Phlda3	utr5	ENSMUSG00000041801	ProperStrand	8	1	-17.3425
chr2	80297373	80297389	LINE	L1MB8	L1	chr2L1MB880297262	ProperStrand	53	chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-6.7001
chr5	117733224	117733320	protein_coding	Pebp1	utr3	ENSMUSG00000032959	ProperStrand	54	chr3	152450610	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	3	-19.0840
chrX	34667269	34667285	protein_coding	Nkap	exon	ENSMUSG00000016409	NonProperStrand	133	chr17	27889526	27889608	protein_coding	D17Wsu92e	utr3	ENSMUSG00000056692	ProperStrand	61	1	-11.6818
chr11	96909593	96909659	protein_coding	Mrpl10	utr3	ENSMUSG00000001445	ProperStrand	43	chr5	130295510	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-5.9014
chr11	108783076	108783093	protein_coding	Axin2	utr5	ENSMUSG00000000142	NonProperStrand	81	chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	1	-11.0820
chr3	142491921	142491988	protein_coding	Pkn2	exon	ENSMUSG00000004591	ProperStrand	28	chr1	161270527	161270554	snoRNA	ENSMUSG00000089536_Scarna3a	.	ENSMUSG00000089536	ProperStrand	247	1	-12.0170
chr5	74489232	74489322	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr17	26353248	26353568	protein_coding	Itfg3	exon	ENSMUSG00000024187	ProperStrand	30	3	-15.9551
chr5	124795608	124795686	protein_coding	Cdk2ap1	utr3	ENSMUSG00000029394	ProperStrand	22	chr11	97642952	97643014	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	4	-14.0505
chr15	100100835	100100916	LTR	ETnERV2-int	ERVK	chr15ETnERV2-int100100766	NonProperStrand	1	chr15	100100282	100100372	LTR	RLTR9E	ERVK	chr15RLTR9E100100296	NonProperStrand	1	1	-inf
chr7	38884163	38884332	protein_coding	Ccne1	exon	ENSMUSG00000002068	ProperStrand	14	chr10	23505559	23505591	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-10.5011
chr7	51502699	51502754	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	chr1	90123798	90124639	protein_coding	Heatr7b1	utr5	ENSMUSG00000079429	ProperStrand	147	1	-6.8315
chr1	133061050	133061253	protein_coding	Eif2d	exon	ENSMUSG00000026427	ProperStrand	12	chr2	26494761	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-6.2196
chr8	4295449	4295465	protein_coding	Elavl1	exon	ENSMUSG00000040028	ProperStrand	39	chr15	82980090	82980224	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	10	-20.2735
chr7	38354919	38354935	protein_coding	Zfp536	exon	ENSMUSG00000043456	NonProperStrand	236	chr16	56035948	56036001	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	1	-6.2256
chr12	110881082	110881115	lincRNA	Rian	intron	ENSMUSG00000091793	ProperStrand	612	chr12	17552949	17553013	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-1.1020
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr9	71564227	71564244	protein_coding	Cgnl1	exon	ENSMUSG00000032232	ProperStrand	46	1	-8.3272
chr1	162967515	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	chr13	23545342	23545388	tRNA	tRNA952-LeuCAG	.	317928	ProperStrand	3	1	-9.6828
chr7	38354919	38354935	protein_coding	Zfp536	exon	ENSMUSG00000043456	NonProperStrand	236	chr10	127522345	127522404	snoRNA	ENSMUSG00000093245_AC131120.1	.	ENSMUSG00000093245	ProperStrand	77	1	-10.0660
chr5	77393607	77395302	protein_coding	Paics	exon	ENSMUSG00000029247	ProperStrand	78	chr5	121828827	121828843	protein_coding	Trafd1	exon	ENSMUSG00000042726	ProperStrand	81	1	-12.1831
chr4	76614453	76614470	protein_coding	Ptprd	intron	ENSMUSG00000028399	ProperStrand	198	chr10	126422072	126422154	protein_coding	Ctdsp2	intron	ENSMUSG00000078429	ProperStrand	74	1	-10.4969
chr7	29696225	29696255	protein_coding	Actn4	intron	ENSMUSG00000054808	ProperStrand	120	chr7	116663732	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.4132
chr3	88500378	88500414	protein_coding	2810403A07Rik	intron	ENSMUSG00000028060	ProperStrand	22	chr19	8798771	8798813	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	2	-10.9825
chr6	143429777	143429793	LINE	L1MA4	L1	chr6L1MA4143429728	ProperStrand	39	chr2	158182156	158182277	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	4	-17.6612
chr8	73419846	73419905	protein_coding	Rpl18a	exon	ENSMUSG00000045128	ProperStrand	394	chr5	147646757	147646796	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	1	-4.2790
chr8	13081354	13085404	protein_coding	Pcid2	exon	ENSMUSG00000038542	ProperStrand	13	chr7	116663728	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-5.3924
chr8	37648011	37649784	protein_coding	Dlc1	exon	ENSMUSG00000031523	ProperStrand	89	chr18	33954830	33954920	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-2.7959
chr15	79908956	79909014	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	chr4	131866629	131866676	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	1	-1.6930
chr9	122075466	122075482	protein_coding	Snrk	exon	ENSMUSG00000038145	NonProperStrand	97	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-4.2887
chr9	58071228	58071244	protein_coding	Pml	intron	ENSMUSG00000036986	ProperStrand	45	chr12	110887862	110887895	snoRNA	ENSMUSG00000084549_SNORD113	.	ENSMUSG00000084549	ProperStrand	196	1	-11.5191
chr1	89596269	89596296	protein_coding	Inpp5d	exon	ENSMUSG00000026288	ProperStrand	75	chr5	108333639	108333666	snoRNA	ENSMUSG00000064453_Snord21	.	ENSMUSG00000064453	ProperStrand	201	1	-10.4398
chr17	24343586	24343602	protein_coding	Ntn3	exon	ENSMUSG00000079662	ProperStrand	237	chr1	88252842	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-3.9821
chr5	125777619	125777665	protein_coding	Scarb1	exon	ENSMUSG00000037936	ProperStrand	18	chr3	68889025	68889142	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-5.5631
chr2	146910645	146910664	protein_coding	Nkx2-4	exon	ENSMUSG00000054160	ProperStrand	10	chr6	125115586	125115602	protein_coding	Gapdh	utr5	ENSMUSG00000057666	ProperStrand	356	1	-13.4123
chr6	52715957	52716047	protein_coding	Tax1bp1	exon	ENSMUSG00000004535	ProperStrand	20	chr15	34370548	34370628	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-5.6655
chr8	87200677	87200767	protein_coding	Nacc1	exon	ENSMUSG00000001910	ProperStrand	130	chr17	35299534	35299614	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	2	-5.6807
chr1	135553012	135553089	protein_coding	Zc3h11a	intron	ENSMUSG00000026464	ProperStrand	102	chr1	74974267	74974283	protein_coding	Ccdc108	exon	ENSMUSG00000047021	ProperStrand	10	1	-15.8915
chrX	72214248	72214264	protein_coding-noncoding	Gab3	utr3	ENSMUSG00000032750	ProperStrand	420	chr1	91358413	91358430	protein_coding	Agap1	intron	ENSMUSG00000055013	ProperStrand	229	1	-6.7493
chr7	91900810	91900827	lincRNA	2610206C17Rik	intron	ENSMUSG00000085236	ProperStrand	13	chr2	57090809	57090826	protein_coding	Gpd2	utr5	ENSMUSG00000026827	ProperStrand	93	1	-15.5488
chr2	51929793	51976655	protein_coding	Rif1	exon	ENSMUSG00000036202	ProperStrand	201	chr9	64024930	64024998	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	4	-19.4693
chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	chr17	30731043	30731084	protein_coding	Glo1	utr3	ENSMUSG00000024026	ProperStrand	75	1	-9.4255
chr18	38476917	38477017	protein_coding	Rnf14	utr3	ENSMUSG00000060450	ProperStrand	9	chr17	35088957	35088999	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	5	-19.5277
chr8	87211383	87211446	protein_coding	Nacc1	intron	ENSMUSG00000001910	ProperStrand	130	chr8	32260335	32260400	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-3.1872
chr16	38575932	38582115	protein_coding	Tmem39a	exon	ENSMUSG00000002845	ProperStrand	9	chr7	57041565	57041581	protein_coding	Prmt3	exon	ENSMUSG00000030505	ProperStrand	89	1	-16.4284
chr4	132822500	132822588	protein_coding	Tmem222	utr3	ENSMUSG00000028857	ProperStrand	8	chr7	116663740	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	6	-20.4867
chr4	111928995	111929011	protein_coding	Skint3	intron	ENSMUSG00000070868	NonProperStrand	48	chr2	26494798	26494824	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.5138
chr4	116136698	116136764	protein_coding	Mast2	utr5	ENSMUSG00000003810	ProperStrand	37	chr1	89673634	89673724	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	9	-20.9569
chr4	111645557	111645573	protein_coding	Skint7	utr5	ENSMUSG00000049214	ProperStrand	3	chr11	6428136	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-9.3720
chr11	6428088	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr13	21999016	21999062	tRNA	tRNA82-MetCAT	.	1156372	ProperStrand	44	2	-6.3728
chr11	63885336	63887052	protein_coding	Cox10	exon	ENSMUSG00000042148	NonProperStrand	187	chr5	90672029	90672082	protein_coding	Ankrd17	exon	ENSMUSG00000055204	ProperStrand	77	1	-10.5315
chr11	100938630	100938715	protein_coding	Naglu	exon	ENSMUSG00000001751	ProperStrand	3	chr8	122052847	122052864	protein_coding	Mbtps1	exon	ENSMUSG00000031835	NonProperStrand	16	1	-inf
chr8	86095666	86095766	protein_coding	Tecr	utr3	ENSMUSG00000031708	ProperStrand	100	chr10	82456767	82456785	protein_coding	Chst11	intron	ENSMUSG00000034612	ProperStrand	170	1	-10.1977
chr5	104869323	104869413	protein_coding	Spp1	exon	ENSMUSG00000029304	ProperStrand	52	chr7	116664844	116664924	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.7980
chr19	36965339	36965429	protein_coding	Tnks2	utr3	ENSMUSG00000024811	ProperStrand	133	chr2	130101984	130102051	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	5	-15.8445
chr3	88240435	88240525	protein_coding	Sema4a	utr3	ENSMUSG00000028064	ProperStrand	4	chr8	113362435	113362515	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	1	-14.9370
chr8	122032780	122032816	protein_coding	Mbtps1	utr3	ENSMUSG00000031835	ProperStrand	81	chr9	64143797	64143873	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-7.1746
chr9	108283836	108286416	protein_coding	Usp4	exon	ENSMUSG00000032612	ProperStrand	29	chr11	68886975	68887061	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	5	-23.1672
chr4	131908357	131908457	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr7	52381973	52381996	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-1.2656
chr10	79416213	79416303	protein_coding	Arid3a	utr3	ENSMUSG00000019564	ProperStrand	16	chr3	123210895	123210975	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-4.4647
chr17	35279488	35279672	protein_coding	Bag6	exon	ENSMUSG00000024392	ProperStrand	181	chr4	131865498	131865517	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	2	-3.6883
chr13	46862888	46862928	snoRNA	ENSMUSG00000064558_SNORA55	.	ENSMUSG00000064558	ProperStrand	187	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-4.3813
chrX	34667269	34667285	protein_coding	Nkap	exon	ENSMUSG00000016409	NonProperStrand	133	chr15	41651426	41651476	protein_coding	Oxr1	exon	ENSMUSG00000022307	ProperStrand	21	1	-13.8425
chr10	59990537	59990627	protein_coding	Cdh23	intron	ENSMUSG00000012819	ProperStrand	16	chr10	60842970	60843060	protein_coding	X99384	intron	ENSMUSG00000020092	NonProperStrand	6	1	-19.5178
chr1	95479776	95479857	protein_coding	Farp2	intron	ENSMUSG00000034066	ProperStrand	5	chr10	80641693	80641717	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	1	-12.7033
chr19	11718874	11718964	LINE	Lx	L1	chr19Lx11718797	NonProperStrand	1	chr19	11719167	11719257	SINE	B1_Mus1	Alu	chr19B1_Mus111719122	NonProperStrand	1	1	-inf
chr13	46982901	46982917	protein_coding	Kif13a	intron	ENSMUSG00000021375	NonProperStrand	25	chr11	6428098	6428155	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.8448
chr2	29652036	29652053	protein_coding	Coq4	exon	ENSMUSG00000026798	ProperStrand	4	chr5	108336362	108336408	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-10.4876
chr1	162968441	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	chr11	77996560	77996612	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	2	-0.7198
chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	chr11	62416600	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-2.0543
chr17	56577330	56577346	protein_coding	Ptprs	exon	ENSMUSG00000013236	ProperStrand	152	chr17	35089182	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-3.7113
mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr5	124846010	124848442	protein_coding	Sbno1	exon	ENSMUSG00000038095	ProperStrand	134	1	-4.3494
chr4	128877920	128878010	protein_coding	Yars	intron	ENSMUSG00000028811	ProperStrand	131	chr5	121655017	121655097	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.3574
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr17	13184993	13185010	protein_coding	Wtap	utr5	ENSMUSG00000060475	ProperStrand	119	1	-7.4729
chr2	172270204	172270220	protein_coding	2410001C21Rik	exon	ENSMUSG00000027502	NonProperStrand	54	chr4	21606097	21606114	protein_coding	Prdm13	exon	ENSMUSG00000040478	ProperStrand	51	1	-13.8573
chr19	43579103	43579291	protein_coding	Got1	exon	ENSMUSG00000025190	ProperStrand	32	chr4	131866647	131866674	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	1	-10.3725
chr4	143027927	143028559	protein_coding	Oog4	exon	ENSMUSG00000047799	NonProperStrand	99	chr11	6428035	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-4.1174
chr18	65616180	65616225	protein_coding	Malt1	intron	ENSMUSG00000032688	ProperStrand	6	chr18	35716728	35716749	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-10.9507
chr2	129998643	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr7	148634713	148634836	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	3	-1.1747
chr3	89249467	89249547	protein_coding	Pbxip1	exon	ENSMUSG00000042613	ProperStrand	16	chr4	131908694	131908784	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.4136
chr2	167836657	167836685	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	chr6	87538389	87538405	protein_coding	Prokr1	exon	ENSMUSG00000049409	NonProperStrand	2	1	-19.8743
chr11	5180669	5180685	protein_coding	Znrf3	utr3	ENSMUSG00000041961	NonProperStrand	210	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	3	-11.3034
chr3	96980254	96980285	protein_coding	Acp6	exon	ENSMUSG00000028093	ProperStrand	19	chr2	26494708	26494802	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-8.7489
mmu-miR-3968	3	21	miRNA	mmu-miR-3968	.	mmu-miR-3968	ProperStrand	27	chr11	80297182	80297254	protein_coding	Myo1d	utr3	ENSMUSG00000035441	ProperStrand	144	4	-inf
chr12	70269859	70269879	protein_coding	Lrr1	exon	ENSMUSG00000034883	ProperStrand	26	chr8	73419656	73419756	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.7022
chr4	57156388	57156407	Low_complexity	GC_rich	Low_complexity	chr4GC_rich57156357	NonProperStrand	5	chr14	33005038	33005093	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	3	-18.9341
chr11	50024105	50024229	protein_coding	Sqstm1	exon	ENSMUSG00000015837	ProperStrand	36	chr3	108228259	108228275	protein_coding	Sars	utr3	ENSMUSG00000068739	NonProperStrand	200	1	-11.9302
chr12	111930487	111930503	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr2	30206148	30206169	protein_coding	Sh3glb2	exon	ENSMUSG00000026860	ProperStrand	8	1	-12.3919
chr11	60370927	60370943	protein_coding	Alkbh5	utr3	ENSMUSG00000042650	ProperStrand	203	chr5	121655127	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-1.6571
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr7	136800631	136800649	SINE	RSINE1	B4	chr7RSINE1136800606	ProperStrand	216	1	-6.1734
chr11	69483211	69483301	protein_coding-noncoding	Eif4a1	utr3	ENSMUSG00000059796	ProperStrand	68	chr3	90310290	90310367	protein_coding	2500003M10Rik	utr5	ENSMUSG00000001017	ProperStrand	28	2	-19.1134
chr5	108334195	108334333	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	chr3	95980284	95980410	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	8	-4.8071
chr3	94577148	94577481	protein_coding	Cgn	exon	ENSMUSG00000068876	ProperStrand	14	chr16	23111777	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.5328
chr1	94808504	94808604	protein_coding	Rnpepl1	intron	ENSMUSG00000026269	ProperStrand	7	chr1	162967508	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-7.7490
chr13	23626112	23626183	protein_coding	Hist1h2af	utr3	ENSMUSG00000061991	ProperStrand	7	chr7	117189963	117190053	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-7.5942
chr11	76231980	76232070	protein_coding	Abr	utr3	ENSMUSG00000017631	ProperStrand	33	chr4	86232405	86232485	snoRNA	ENSMUSG00000088958_Scarna8	.	ENSMUSG00000088958	ProperStrand	366	1	-10.8971
chr11	78171735	78171753	protein_coding	Foxn1	utr3	ENSMUSG00000002057	NonProperStrand	5	chr13	99082606	99082706	protein_coding	Btf3	intron	ENSMUSG00000021660	ProperStrand	64	1	-18.0009
chr2	131892530	131892599	protein_coding	Slc23a2	exon	ENSMUSG00000027340	ProperStrand	44	chr4	131865857	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	6	-13.6751
chr16	17554385	17554457	protein_coding-noncoding	4930451C15Rik	utr3	ENSMUSG00000022759	ProperStrand	1	chr7	105241589	105241623	protein_coding	Myo7a	intron	ENSMUSG00000030761	NonProperStrand	33	1	-inf
chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr1	89681202	89681396	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	19	-1.6689
chr14	25311033	25311157	protein_coding	Rps24	exon	ENSMUSG00000025290	ProperStrand	110	chr15	101919442	101920377	protein_coding	Eif4b	exon	ENSMUSG00000058655	ProperStrand	484	1	-7.9219
chr10	128349097	128349284	protein_coding	Cd63	exon	ENSMUSG00000025351	ProperStrand	29	chr6	71832629	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-7.0530
chr11	78127830	78127891	protein_coding-noncoding	Spag5	utr5	ENSMUSG00000002055	ProperStrand	1	chr8	112603795	112603812	protein_coding	Zfp612	utr5	ENSMUSG00000044676	ProperStrand	7	1	-inf
chr10	62274941	62274966	protein_coding	Tet1	utr3	ENSMUSG00000047146	ProperStrand	286	chr11	6428075	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-1.6229
chr7	140955173	140955198	protein_coding	Dhx32	intron	ENSMUSG00000030986	ProperStrand	100	chr9	36562402	36562476	protein_coding	Stt3a	exon	ENSMUSG00000032116	ProperStrand	31	1	-13.6218
chr4	32795424	32795440	protein_coding	Mdn1	exon	ENSMUSG00000058006	NonProperStrand	16	chr11	6428076	6428157	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-9.4247
chr1	154699479	154699569	protein_coding	Smg7	intron	ENSMUSG00000042772	ProperStrand	88	chr9	120039547	120039627	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.6375
chr16	16983680	16983760	protein_coding	Mapk1	utr5	ENSMUSG00000063358	ProperStrand	67	chr3	19126971	19127061	protein_coding	Pde7a	utr3	ENSMUSG00000069094	ProperStrand	12	1	-16.3383
chr9	20600290	20600402	protein_coding	Col5a3	exon	ENSMUSG00000004098	NonProperStrand	14	chr3	153574609	153574654	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	1	-12.6359
chr7	135848598	135848681	protein_coding	Mcmbp	intron	ENSMUSG00000048170	ProperStrand	87	chr7	150717298	150717350	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-4.7862
chr2	75514154	75514223	protein_coding	Nfe2l2	exon	ENSMUSG00000015839	ProperStrand	24	chr4	131865856	131865946	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.3401
chrX	40944841	40944857	protein_coding	Gm362	exon	ENSMUSG00000078320	ProperStrand	129	chr17	39985459	39985499	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-4.4493
chr8	98272219	98272290	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	chr9	117152749	117152775	protein_coding	Rbms3	intron	ENSMUSG00000039607	NonProperStrand	54	1	-10.2024
chr12	56827199	56827261	protein_coding	Ralgapa1	intron	ENSMUSG00000021027	ProperStrand	9	chrX	84483701	84483735	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-12.1312
chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	chr12	70260038	70260055	protein_coding	Rps29	utr5	ENSMUSG00000034892	ProperStrand	124	1	-11.1086
chr5	115700088	115701111	protein_coding	Rnf10	exon	ENSMUSG00000041740	ProperStrand	95	chr11	62416952	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-5.1453
chr16	11144137	11144203	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr9	118584070	118584135	protein_coding	Itga9	intron	ENSMUSG00000039115	ProperStrand	27	1	-12.0747
chr4	137109542	137109683	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	chr5	65653918	65653935	protein_coding	Rfc1	utr3	ENSMUSG00000029191	ProperStrand	53	1	-8.3529
chr14	39426973	39426994	protein_coding	Nrg3	intron	ENSMUSG00000041014	ProperStrand	9	chr1	89673634	89673724	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-6.9863
chr12	56700675	56700694	protein_coding	Insm2	exon	ENSMUSG00000045440	NonProperStrand	22	chr19	8799828	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-6.9307
chr4	117013790	117013807	protein_coding	Rnf220	intron	ENSMUSG00000028677	ProperStrand	131	chr1	162965531	162965564	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.9369
chr7	141399351	141399367	protein_coding	Adam12	intron	ENSMUSG00000054555	NonProperStrand	49	chr11	6428115	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.5628
chr9	34864376	34864392	protein_coding	St3gal4	intron	ENSMUSG00000032038	ProperStrand	10	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-14.4343
chr11	85003808	85003872	protein_coding	Appbp2	utr3	ENSMUSG00000018481	ProperStrand	15	chr4	131908236	131908277	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.7937
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr18	35714144	35714245	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	3	-1.4228
chr4	95682504	95682532	protein_coding	Hook1	intron	ENSMUSG00000028572	ProperStrand	49	chr15	79913288	79913329	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-6.6863
chr14	51427268	51427288	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr12	32003213	32003230	protein_coding	Gm11053	intron	ENSMUSG00000079147	ProperStrand	12	1	-10.4773
chr11	69170097	69170113	protein_coding	Chd3	exon	ENSMUSG00000018474	NonProperStrand	8	chr19	8798752	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-8.8700
chr11	60252056	60255514	protein_coding	4933439F18Rik	exon	ENSMUSG00000018415	ProperStrand	26	chr8	129468745	129468845	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-6.0466
chr14	47775552	47777094	protein_coding	Gch1	exon	ENSMUSG00000037580	ProperStrand	5	chr4	22414139	22414155	protein_coding	Pou3f2	exon	ENSMUSG00000052621	NonProperStrand	90	1	-17.5669
chr17	32453268	32453285	protein_coding	Akap8	exon	ENSMUSG00000024045	ProperStrand	339	chr9	66295880	66295996	protein_coding	Herc1	exon	ENSMUSG00000038664	ProperStrand	81	4	-inf
chr9	63868722	63868738	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	chr5	115939529	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	11	-19.9946
chr6	128322002	128322018	protein_coding	Foxm1	exon	ENSMUSG00000001517	NonProperStrand	66	chr1	88252837	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-6.4515
chr6	50148712	50151199	protein_coding	Dfna5	intron	ENSMUSG00000029821	NonProperStrand	8	chr16	23110847	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-12.0409
chr18	31008604	31008623	LINE	L1_Mur3	L1	chr18L1_Mur331008559	NonProperStrand	1	chr5	121655016	121655116	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	NonProperStrand	38	1	-inf
chr1	193363185	193364609	protein_coding	Dtl	exon	ENSMUSG00000037474	ProperStrand	27	chr11	97643020	97643047	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-6.6305
chr6	28836611	28838088	protein_coding	Snd1	exon	ENSMUSG00000001424	NonProperStrand	14	chr1	53362393	53362450	protein_coding	Ormdl1	exon	ENSMUSG00000026097	ProperStrand	2	1	-inf
chr17	35647297	35647345	protein_coding	Pou5f1	exon	ENSMUSG00000024406	ProperStrand	104	chr4	116862553	116862662	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	1	-7.7443
chr2	48929534	48929582	protein_coding	Mbd5	intron	ENSMUSG00000036792	ProperStrand	15	chr5	108334239	108336497	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	3	-17.1711
chr17	70947826	70947842	protein_coding	Dlgap1	intron	ENSMUSG00000003279	NonProperStrand	36	chr16	23111447	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.0295
chr8	73119080	73119269	protein_coding	Isyna1	exon	ENSMUSG00000019139	ProperStrand	15	chr11	69481417	69481475	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.8683
chr8	73033511	73033612	protein_coding	Uba52	utr5	ENSMUSG00000090137	ProperStrand	37	chr7	29136584	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	19	-19.6874
mmu-miR-2137	2	21	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	chr4	147111555	147111571	pseudogene	Gm13136	.	ENSMUSG00000081179	NonProperStrand	1	1	-inf
chr4	106721716	106721734	protein_coding	Ssbp3	utr3	ENSMUSG00000061887	ProperStrand	36	chr11	6428035	6428119	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-6.9589
chr11	69037669	69037685	protein_coding	Gucy2e	exon	ENSMUSG00000020890	NonProperStrand	99	chr16	23110454	23110483	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.6530
chr11	119207004	119207020	protein_coding	Sgsh	utr3	ENSMUSG00000005043	ProperStrand	67	chr4	116263894	116265416	protein_coding	Gpbp1l1	exon	ENSMUSG00000034042	ProperStrand	12	1	-16.3383
chr11	120120447	120120485	protein_coding	Bahcc1	exon	ENSMUSG00000039741	ProperStrand	118	chr5	74489628	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-2.5626
chr17	24665439	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	chr5	125884617	125884654	tRNA	tRNA1317-AlaTGC	.	1205930	ProperStrand	149	2	-5.5363
chr1	95715045	95715061	protein_coding	Ing5	utr3	ENSMUSG00000026283	ProperStrand	16	chr18	35716685	35716788	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	8	-inf
chr15	3929292	3929310	protein_coding	Fbxo4	exon	ENSMUSG00000022184	NonProperStrand	1	chr2	26494797	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-inf
chr6	119901097	119919407	protein_coding	Wnk1	exon	ENSMUSG00000045962	ProperStrand	221	chr3	123210858	123210972	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	4	-2.5348
chr1	71689627	71689698	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr8	85689747	85689763	protein_coding	Tbc1d9	utr5	ENSMUSG00000031709	ProperStrand	66	1	-7.6429
chr8	125626580	125626608	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	chr18	85129187	85129249	protein_coding	Fbxo15	intron	ENSMUSG00000034391	ProperStrand	23	1	-12.5526
chr5	111812088	111812105	protein_coding	Pitpnb	exon	ENSMUSG00000050017	ProperStrand	137	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-6.1044
chr11	106642154	106646325	protein_coding	Ddx5	utr3	ENSMUSG00000020719	ProperStrand	181	chr4	131908689	131908788	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-2.2030
chr10	93333012	93334234	protein_coding	Metap2	exon	ENSMUSG00000036112	ProperStrand	78	chr19	8800373	8800463	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	5	-13.4267
chr8	47123810	47123869	protein_coding	Snx25	exon	ENSMUSG00000038291	ProperStrand	5	chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-10.9706
chr17	36994486	36994502	protein_coding	Trim26	exon	ENSMUSG00000024457	ProperStrand	5	chr1	89673550	89673628	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-8.2536
chr11	3784162	3784183	LINE	L1_Mur1	L1	chr11L1_Mur13784054	NonProperStrand	1	chr8	97971960	97971990	protein_coding	Csnk2a2	utr3	ENSMUSG00000046707	ProperStrand	21	1	-inf
chr2	166888978	166889019	snoRNA	ENSMUSG00000077515_SNORD12	.	ENSMUSG00000077515	ProperStrand	191	chr11	116938557	116938647	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	7	-20.4316
chr13	98259638	98259715	lincRNA	Gm11019	intron	ENSMUSG00000078952	ProperStrand	113	chr11	48614373	48614435	snoRNA	ENSMUSG00000064500_SNORD95	.	ENSMUSG00000064500	ProperStrand	100	1	-11.0159
chr5	108334206	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	chr17	35089183	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	11	-3.0648
chr3	144748059	144749264	protein_coding	Clca5	exon	ENSMUSG00000036960	ProperStrand	86	chr18	73693166	73693188	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-4.8255
chr9	26440743	26440759	DNA	MER5A	MER1_type	chr9MER5A26440741	ProperStrand	108	chr7	52382014	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-5.5556
chr6	120424377	120425504	protein_coding	Il17ra	exon	ENSMUSG00000002897	ProperStrand	61	chr15	84770932	84770950	protein_coding	Nup50	utr3	ENSMUSG00000016619	NonProperStrand	2	1	-21.5016
chr19	8799381	8799433	snoRNA	ENSMUSG00000065280_SNORD28	.	ENSMUSG00000065280	ProperStrand	269	chr8	129468760	129468799	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	3	-4.9728
chr13	51852057	51852148	protein_coding-noncoding	Sema4d	utr3	ENSMUSG00000021451	ProperStrand	13	chr13	51852183	51852273	protein_coding	Sema4d	intron	ENSMUSG00000021451	ProperStrand	42	12	-inf
chr13	18740146	18740226	LINE	L1Md_F2	L1	chr13L1Md_F218739029	NonProperStrand	1	chr13	18823615	18823705	protein_coding	Vps41	intron	ENSMUSG00000041236	ProperStrand	31	1	-inf
chr18	39387214	39387233	protein_coding	Arhgap26	intron	ENSMUSG00000036452	ProperStrand	46	chr7	116664793	116664913	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	NonProperStrand	12	1	-17.1378
chr1	63223756	63223800	protein_coding	Eef1b2	utr5	ENSMUSG00000025967	ProperStrand	106	chr2	32818889	32818941	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-4.3734
chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	chr1	141351452	141351469	protein_coding	Aspm	utr5	ENSMUSG00000033952	ProperStrand	64	1	-9.1404
chr4	131908342	131908442	lincRNA	Gm17300	exon	ENSMUSG00000091021	ProperStrand	109	chr19	5796887	5796920	lincRNA	Malat1	exon	ENSMUSG00000092341	NonProperStrand	5	1	-17.2113
chr9	107926477	107926541	protein_coding	Ip6k1	utr5	ENSMUSG00000032594	ProperStrand	61	chr7	56556420	56556436	protein_coding	Nav2	intron	ENSMUSG00000052512	ProperStrand	106	1	-12.1367
chr1	24621004	24621032	protein_coding	Gm10925	utr3	ENSMUSG00000090378	ProperStrand	320	chr19	8800087	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	2	-7.2233
chr10	75400114	75400180	protein_coding	Chchd10	exon	ENSMUSG00000049422	ProperStrand	140	chr12	112779148	112779238	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-3.1911
chr4	25581400	25581417	protein_coding	Fut9	intron	ENSMUSG00000055373	ProperStrand	10	chr10	110918592	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-11.3625
chr14	101674544	101674561	LINE	L1_Mus3	L1	chr14L1_Mus3101674367	ProperStrand	1	chr4	106682299	106682355	protein_coding	Ssbp3	exon	ENSMUSG00000061887	ProperStrand	36	1	-inf
chr7	134703396	134703486	protein_coding	Srcap	exon	ENSMUSG00000090663	ProperStrand	28	chr10	23505178	23505258	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.4185
chr9	120038558	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	chr13	96100554	96100694	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	9	-3.6915
chr4	137882123	137882139	protein_coding	Pink1	utr5	ENSMUSG00000028756	ProperStrand	4	chr7	116663640	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-13.1590
chr17	35647329	35647429	protein_coding	Pou5f1	exon	ENSMUSG00000024406	ProperStrand	104	chr13	58511668	58511685	protein_coding	Rmi1	utr3	ENSMUSG00000035367	ProperStrand	23	1	-14.1500
chr2	144087324	144087367	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	NonProperStrand	3	chr18	35714192	35714282	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	NonProperStrand	47	1	-inf
chr2	25206397	25206444	protein_coding	Man1b1	utr3	ENSMUSG00000036646	ProperStrand	57	chr4	131908718	131908808	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.2943
chr4	68607688	68607705	protein_coding	Dbc1	intron	ENSMUSG00000028351	ProperStrand	78	chr17	27771055	27771093	protein_coding	Rps10	exon	ENSMUSG00000052146	ProperStrand	94	1	-11.8836
chr17	34188474	34188570	protein_coding	Col11a2	exon	ENSMUSG00000024330	ProperStrand	14	chr9	110848480	110848547	protein_coding	Tdgf1	utr5	ENSMUSG00000032494	ProperStrand	218	1	-13.6934
chr4	136101981	136101997	protein_coding	Luzp1	utr3	ENSMUSG00000001089	NonProperStrand	47	chr18	32125233	32125312	protein_coding	Myo7b	exon	ENSMUSG00000024388	ProperStrand	8	1	-18.0973
chr4	57455800	57455817	protein_coding	Palm2	intron	ENSMUSG00000090053	ProperStrand	17	chr2	26768049	26768073	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	1	-10.9492
chr9	106740702	106740755	protein_coding	Vprbp	exon	ENSMUSG00000040325	ProperStrand	35	chr10	23505153	23505192	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-3.7108
chr1	65285078	65293547	protein_coding	Pikfyve	exon	ENSMUSG00000025949	ProperStrand	59	chr17	13112517	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	5	-17.9620
chr9	47347777	47347793	protein_coding	Cadm1	intron	ENSMUSG00000032076	ProperStrand	77	chr4	131908783	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.9043
chr11	23184647	23184723	protein_coding	Xpo1	exon	ENSMUSG00000020290	ProperStrand	123	chr9	30235085	30235102	protein_coding	Snx19	exon	ENSMUSG00000031993	ProperStrand	353	1	-8.3263
chr3	96363020	96363110	protein_coding	Txnip	exon	ENSMUSG00000038393	ProperStrand	172	chr7	116664819	116664899	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-0.9628
chr4	147475493	147475509	protein_coding	2610109H07Rik	utr3	ENSMUSG00000029005	NonProperStrand	46	chrX	120217486	120217504	protein_coding	3110007F17Rik	intron	ENSMUSG00000079450	NonProperStrand	18	1	-16.2956
chr16	21221528	21221754	protein_coding	Ephb3	exon	ENSMUSG00000005958	ProperStrand	23	chr6	125136469	125136522	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	1	-8.3632
chr8	96697268	96697293	protein_coding	Mt2	exon	ENSMUSG00000031762	ProperStrand	71	chr3	123210854	123210900	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.7983
chr4	140121137	140121153	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	chrX	34622906	34623022	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-3.2708
chr18	36927846	36929740	protein_coding	Hars	exon	ENSMUSG00000001380	ProperStrand	23	chr10	126501415	126501467	protein_coding	Cdk4	exon	ENSMUSG00000006728	ProperStrand	47	1	-15.7519
chr17	95160910	95218243	Satellite	MMSAT4	Satellite	chr17MMSAT495216724	NonProperStrand	14	chr7	117190027	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-6.1508
chrX	147482321	147521385	protein_coding	Fgd1	exon	ENSMUSG00000025265	ProperStrand	96	chr10	110918618	110918693	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-4.5756
chr8	77742558	77742574	protein_coding	Rasd2	exon	ENSMUSG00000034472	NonProperStrand	237	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.0195
chr5	138610680	138610856	protein_coding	Mcm7	exon	ENSMUSG00000029730	ProperStrand	258	chr8	129468771	129468851	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-1.8343
chr17	12885636	12886014	protein_coding	Igf2r	exon	ENSMUSG00000023830	ProperStrand	151	chr1	89673731	89673769	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-1.7047
chr2	26251324	26251414	protein_coding	Pmpca	utr3	ENSMUSG00000026926	ProperStrand	45	chr5	108336381	108336461	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-5.4406
chr17	23955965	23956023	protein_coding	Srrm2	utr3	ENSMUSG00000039218	ProperStrand	521	chr18	20123591	20123608	protein_coding	Dsc3	intron	ENSMUSG00000059898	ProperStrand	31	1	-10.3183
chr1	74974267	74974283	protein_coding	Ccdc108	exon	ENSMUSG00000047021	ProperStrand	10	chr5	66418439	66418488	protein_coding	Rbm47	exon	ENSMUSG00000070780	ProperStrand	13	1	-22.1951
chr10	79441526	79441617	protein_coding	ORF61	exon	ENSMUSG00000013858	ProperStrand	71	chr4	116827262	116827315	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	1	-10.0202
chr3	108189473	108189563	protein_coding	Psrc1	exon	ENSMUSG00000068744	ProperStrand	38	chr2	144087333	144087413	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-7.4555
chr18	68483783	68483830	protein_coding	Rnmt	utr3	ENSMUSG00000009535	ProperStrand	21	chr16	23111416	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.9586
chr4	137030791	137030810	protein_coding	Hspg2	intron	ENSMUSG00000028763	NonProperStrand	18	chr3	123210893	123210974	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-4.2354
chr8	66444293	66444310	LTR	RLTR13C1	ERVK	chr8RLTR13C166444106	ProperStrand	3	chr10	80640896	80640932	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-12.4355
chr16	90230461	90242833	protein_coding	Scaf4	exon	ENSMUSG00000022983	ProperStrand	44	chr16	23110502	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.0046
chr2	167836656	167836680	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	chr9	62222553	62225117	protein_coding	Anp32a	exon	ENSMUSG00000032249	ProperStrand	75	1	-11.6841
chr17	24615989	24616006	protein_coding	Mlst8	utr5	ENSMUSG00000024142	NonProperStrand	40	chr11	120208987	120209003	protein_coding	Actg1	exon	ENSMUSG00000062825	ProperStrand	178	1	-11.9492
chr6	119028204	119028221	protein_coding	Cacna1c	intron	ENSMUSG00000051331	NonProperStrand	49	chr13	23653896	23653968	protein_coding	Hist1h3e	exon	ENSMUSG00000069273	ProperStrand	30	1	-15.1374
chr4	132530098	132530117	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	chr2	26494714	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	6	-5.0615
chr4	131908356	131908465	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr7	134110716	134111233	protein_coding	Sez6l2	exon	ENSMUSG00000030683	ProperStrand	94	1	-6.3698
chr11	102294588	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr1	89681249	89681349	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-1.5106
chr9	15130746	15130794	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	chr15	79908958	79909019	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-1.7762
chr1	194330979	194330995	protein_coding	Kcnh1	utr3	ENSMUSG00000058248	ProperStrand	22	chr16	23110909	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.4786
chr11	120209123	120209306	protein_coding	Actg1	exon	ENSMUSG00000062825	ProperStrand	178	chr7	116663680	116663760	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-0.8952
chr17	23978318	23978371	protein_coding	Prss41	utr3	ENSMUSG00000024114	ProperStrand	2	chr18	35091557	35091595	protein_coding	Etf1	utr5	ENSMUSG00000024360	ProperStrand	74	1	-inf
chr17	24869755	24869771	protein_coding	Rpl3l	utr5	ENSMUSG00000002500	NonProperStrand	56	chr7	29136525	29136572	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.4821
chr8	24042846	24042864	protein_coding	Myst3	exon	ENSMUSG00000031540	ProperStrand	111	chr16	23110454	23110526	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.4833
chr14	80262508	80262525	lincRNA	Gm6999	intron	ENSMUSG00000075495	ProperStrand	265	chr15	79913308	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-1.1592
chr11	48617408	48617685	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	chr17	35299552	35299632	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-1.6723
chr18	38747799	38747815	protein_coding	Spry4	utr3	ENSMUSG00000024427	NonProperStrand	3	chr4	104151861	104277926	protein_coding	Dab1	exon	ENSMUSG00000028519	ProperStrand	19	1	-inf
chr17	62367075	62367097	LINE	Lx3_Mus	L1	chr17Lx3_Mus62365494	ProperStrand	4	chr5	130300477	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-13.1528
chr7	152049864	152049891	protein_coding	Fgf4	utr3	ENSMUSG00000050917	ProperStrand	66	chr3	96528187	96528280	snoRNA	ENSMUSG00000065669_SNORA5	.	ENSMUSG00000065669	ProperStrand	180	4	-21.1844
chr15	89133048	89133070	protein_coding	Sbf1	exon	ENSMUSG00000036529	ProperStrand	85	chr18	82773672	82773688	protein_coding	Zfp236	exon	ENSMUSG00000041258	NonProperStrand	117	1	-11.2718
chr7	112782969	112782985	protein_coding	Arfip2	utr3	ENSMUSG00000030881	ProperStrand	191	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-5.4556
chr5	125365445	125366632	protein_coding	Zfp664	exon	ENSMUSG00000079215	ProperStrand	47	chr16	23111401	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-3.0053
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr7	26133303	26133381	protein_coding	Megf8	exon	ENSMUSG00000045039	ProperStrand	100	1	-5.9162
chr2	129998662	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	NonProperStrand	1	chr9	79915198	79915214	protein_coding	Senp6	utr5	ENSMUSG00000034252	ProperStrand	110	1	-inf
chr12	119108517	119108534	protein_coding	Cdca7l	exon	ENSMUSG00000021175	ProperStrand	7	chr16	23110913	23111003	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.4785
chr1	94816663	94816732	protein_coding	Rnpepl1	utr3	ENSMUSG00000026269	ProperStrand	7	chr17	28488633	28488649	protein_coding	Tulp1	utr3	ENSMUSG00000037446	NonProperStrand	4	1	-inf
chr11	11867679	11870432	protein_coding	Grb10	exon	ENSMUSG00000020176	NonProperStrand	159	chr11	6520372	6520442	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	2	-9.4294
chr1	20798917	20799683	protein_coding	Mcm3	exon	ENSMUSG00000041859	ProperStrand	142	chr12	60774058	60774111	snoRNA	ENSMUSG00000077603_SNORA3	.	ENSMUSG00000077603	ProperStrand	185	3	-19.5615
chr4	131908716	131908806	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	chr1	59748785	59748828	snoRNA	ENSMUSG00000077345_Snord70	.	ENSMUSG00000077345	ProperStrand	61	1	-1.2013
chr13	82850265	82850345	LINE	Lx9	L1	chr13Lx982850176	ProperStrand	1	chr17	53116191	53116281	protein_coding	Kcnh8	intron	ENSMUSG00000073383	NonProperStrand	2	1	-inf
chr2	41199972	41199989	protein_coding	Lrp1b	exon	ENSMUSG00000049252	ProperStrand	376	chr5	130300419	130300524	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	4	-1.7296
chr2	26494718	26494808	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	NonProperStrand	27	chr5	92485127	92485207	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	NonProperStrand	1	1	-inf
chr2	118424100	118424170	protein_coding	Bub1b	utr5	ENSMUSG00000040084	ProperStrand	45	chr7	148634776	148634836	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	7	-inf
mmu-miR-6240	2	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr8	4267337	4267649	protein_coding	Timm44	exon	ENSMUSG00000002949	ProperStrand	63	1	-5.8077
chr5	104868292	104868342	protein_coding	Spp1	exon	ENSMUSG00000029304	ProperStrand	52	chr11	69481332	69481432	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	4	-11.6283
chr14	19101565	19101655	protein_coding	Rpl15	exon	ENSMUSG00000012405	ProperStrand	145	chr7	116664841	116664921	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.1816
chr3	97671972	97671989	protein_coding	Pde4dip	utr5	ENSMUSG00000038170	ProperStrand	25	chr17	39985356	39985409	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-7.6779
chr11	33060904	33061115	protein_coding	Npm1	exon	ENSMUSG00000057113	ProperStrand	352	chr14	76247807	76247852	protein_coding	Tpt1	intron	ENSMUSG00000060126	ProperStrand	236	2	-11.3087
chr2	157296551	157296651	protein_coding	Src	utr3	ENSMUSG00000027646	ProperStrand	32	chr19	8799835	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-6.1803
chr10	68800774	68800874	protein_coding	Cdk1	utr3	ENSMUSG00000019942	NonProperStrand	2	chr4	131865453	131865515	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	NonProperStrand	15	2	-inf
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr19	8798740	8798759	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-1.0216
chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	chr3	85942714	85942780	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	2	-9.7661
chr4	154992903	154992970	protein_coding	Slc35e2	utr3	ENSMUSG00000042202	ProperStrand	6	chr5	74489623	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-8.4105
chr15	44259708	44259732	protein_coding	Eny2	utr5	ENSMUSG00000022338	ProperStrand	9	chr15	34370544	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	3	-16.8941
chr11	48615535	48615564	snoRNA	ENSMUSG00000064725_Snord96a	.	ENSMUSG00000064725	ProperStrand	89	chrX	71517865	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-5.7690
chr2	144097020	144097037	protein_coding	8430406I07Rik	utr5	ENSMUSG00000027424	ProperStrand	43	chr16	23111450	23111501	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.7472
chr9	78326840	78328417	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr7	150717298	150717425	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	5	-2.3567
chr7	87370593	87370648	protein_coding	Sema4b	utr3	ENSMUSG00000030539	NonProperStrand	4	chr19	8963087	8963165	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	2	-20.7566
chr11	120439677	120439703	protein_coding	Arhgdia	utr3	ENSMUSG00000025132	ProperStrand	39	chr16	23110563	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.2225
chr5	140783575	140783662	protein_coding	Mad1l1	exon	ENSMUSG00000029554	ProperStrand	69	chr9	15119704	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.3903
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr13	23528217	23528284	tRNA	tRNA103-LysCTT	.	154002	ProperStrand	180	1	-6.7401
chr11	70542562	70542609	protein_coding	Kif1c	utr3	ENSMUSG00000020821	ProperStrand	26	chr15	79913288	79913352	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	5	-19.5639
chr4	125389109	125389127	protein_coding	Grik3	utr3	ENSMUSG00000001985	ProperStrand	126	chr18	35412372	35413354	protein_coding	Ctnna1	exon	ENSMUSG00000037815	ProperStrand	115	1	-10.5170
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr9	37460654	37460730	protein_coding	Tbrg1	exon	ENSMUSG00000011114	ProperStrand	56	1	-7.9331
chr1	89681254	89681354	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	chr17	35087894	35087960	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	10	-3.4112
chr2	45554622	45554646	LTR	RMER17B	ERVK	chr2RMER17B45554262	ProperStrand	5	chr6	13029987	13030087	protein_coding	Tmem106b	intron	ENSMUSG00000029571	ProperStrand	8	5	-inf
chr4	106889507	106889524	protein_coding	Ldlrad1	intron	ENSMUSG00000070877	NonProperStrand	1	chr11	6428088	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-inf
chr6	33285947	33922279	protein_coding	Exoc4	utr3	ENSMUSG00000029763	ProperStrand	120	chr16	23110829	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	7	-2.1079
chr7	16524110	16524219	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	chr17	35087894	35087946	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	4	-7.4321
chr10	77454764	77454803	protein_coding	Pfkl	exon	ENSMUSG00000020277	ProperStrand	179	chr17	24857716	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	5	-5.1596
chr4	43505792	43505874	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr1	194330979	194330996	protein_coding	Kcnh1	utr3	ENSMUSG00000058248	ProperStrand	22	1	-4.9644
chr11	121158251	121158351	protein_coding	Foxk2	exon	ENSMUSG00000039275	ProperStrand	38	chr3	123210854	123210878	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	6	-15.9776
chr17	35044000	35044346	protein_coding	Ehmt2	exon	ENSMUSG00000013787	ProperStrand	42	chr6	134457554	134457631	protein_coding	Lrp6	exon	ENSMUSG00000030201	ProperStrand	42	1	-14.7446
chr19	4192794	4194798	protein_coding	Ppp1ca	exon	ENSMUSG00000040385	ProperStrand	40	chr4	131908689	131908807	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-9.4666
chr9	15118381	15120058	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	chr9	15118322	15118380	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	4	-3.6090
chr15	79260142	79260232	protein_coding	Csnk1e	exon	ENSMUSG00000022433	ProperStrand	59	chr11	69483194	69483274	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.4784
chr1	71643940	71644040	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr2	164475306	164475989	protein_coding	Wfdc9	exon	ENSMUSG00000074594	ProperStrand	1	1	-inf
chr5	144680404	144691916	protein_coding	Pms2	exon	ENSMUSG00000079109	ProperStrand	21	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-6.1443
chr4	53761337	53774114	protein_coding	Fktn	exon	ENSMUSG00000028414	ProperStrand	37	chr16	23110988	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.7935
chr2	29658227	29658330	protein_coding	Slc27a4	utr5	ENSMUSG00000059316	ProperStrand	24	chr5	23012003	23012022	protein_coding	Srpk2	utr3	ENSMUSG00000062604	ProperStrand	51	9	-inf
chr18	5737842	5772597	protein_coding	Zeb1	intron	ENSMUSG00000024238	ProperStrand	24	chr16	23111373	23111499	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	6	-15.8008
chrX	7409339	7409433	protein_coding	Kcnd1	exon	ENSMUSG00000009731	ProperStrand	19	chr4	115484059	115484081	protein_coding	Atpaf1	utr3	ENSMUSG00000028710	ProperStrand	202	3	-19.9278
chr19	45056964	45056980	protein_coding	Fam178a	utr3	ENSMUSG00000036097	ProperStrand	29	chr14	76247740	76247830	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	4	-17.2432
chr9	110141762	110141789	protein_coding	Smarcc1	utr3	ENSMUSG00000032481	ProperStrand	108	chr10	39978350	39978440	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-4.3270
chr13	89930644	89930661	lincRNA	Gm4117	exon	ENSMUSG00000089940	ProperStrand	2	chr4	41142047	41142094	protein_coding	Ubap2	utr3	ENSMUSG00000028433	ProperStrand	292	1	-17.4942
chr8	82163889	82167683	protein_coding	Otud4	exon	ENSMUSG00000036990	ProperStrand	45	chr18	35714247	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-3.9783
chr9	36587250	36587272	protein_coding	Ei24	utr3	ENSMUSG00000062762	ProperStrand	25	chr8	73419657	73419782	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	4	-15.2054
chr5	81522762	81522780	protein_coding	Lphn3	intron	ENSMUSG00000037605	NonProperStrand	39	chr5	130295414	130295500	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	5	-18.8555
chr3	95327131	95327148	LTR	MTD	MaLR	chr3MTD95326929	NonProperStrand	1	chr10	23506322	23506348	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-inf
chr9	101244815	101244832	LTR	MER89	ERV1	chr9MER89101244795	NonProperStrand	1	chr10	23506278	23506348	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-inf
chr11	4667716	4667739	protein_coding	Nf2	utr3	ENSMUSG00000009073	ProperStrand	72	chr15	98350146	98350280	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-4.4112
chr7	135842910	135845761	protein_coding	Mcmbp	exon	ENSMUSG00000048170	ProperStrand	87	chr15	79912914	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-5.0570
chr11	60370072	60370162	protein_coding	Alkbh5	utr3	ENSMUSG00000042650	ProperStrand	203	chr4	3762227	3762292	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	1	-7.0589
chr14	32051595	32051686	protein_coding	Phf7	intron	ENSMUSG00000021902	ProperStrand	2	chr19	8963087	8963167	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-inf
chr18	35716765	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	chr12	110918155	110918221	snoRNA	ENSMUSG00000065749_AF357428	.	ENSMUSG00000065749	ProperStrand	218	5	-3.9146
chr18	18740204	18740284	LINE	Lx8	L1	chr18Lx818739933	NonProperStrand	1	chr18	18740377	18740467	LINE	Lx8	L1	chr18Lx818740354	NonProperStrand	1	1	-inf
chr18	32252778	32252868	protein_coding	Iws1	exon	ENSMUSG00000024384	ProperStrand	72	chr14	76247711	76247785	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	9	-19.1126
chr17	4082319	4082397	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr1	154735028	154735066	protein_coding	Smg7	intron	ENSMUSG00000042772	ProperStrand	88	3	-19.2705
chr2	5329503	5329523	protein_coding	Camk1d	intron	ENSMUSG00000039145	ProperStrand	50	chr17	24857740	24857830	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.6076
chr18	89387605	89387621	protein_coding	Cd226	intron	ENSMUSG00000034028	ProperStrand	47	chrX	84483702	84483756	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-8.7388
chr2	146125210	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	chr15	98350193	98350283	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	3	-6.9824
chr8	13416897	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr2	30892115	30892710	protein_coding	Fnbp1	exon	ENSMUSG00000075415	ProperStrand	53	1	-6.7001
chr4	151364893	151364929	protein_coding	Phf13	utr3	ENSMUSG00000047777	ProperStrand	38	chr7	118219574	118219656	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	6	-inf
chr3	153575090	153575136	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	chr10	114779566	114779630	protein_coding	Tmem19	exon	ENSMUSG00000069520	ProperStrand	24	1	-10.3454
chr1	102076757	102076794	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	chr4	131865381	131865471	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-0.8723
chr1	115800765	115800822	lincRNA	9330185C12Rik	intron	ENSMUSG00000086520	ProperStrand	45	chr4	43505788	43505878	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	1	-3.5955
chr8	122114518	122114535	protein_coding	Lrrc50	exon	ENSMUSG00000031831	NonProperStrand	10	chr9	15119272	15119397	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-8.7172
chr6	81992905	81992923	protein_coding	Fam176a	intron	ENSMUSG00000035104	ProperStrand	64	chr15	102377262	102377280	protein_coding	Atf7	intron	ENSMUSG00000052414	ProperStrand	14	1	-16.1645
chr6	29121503	29126462	protein_coding	Prrt4	exon	ENSMUSG00000079654	ProperStrand	23	chr4	131908359	131908410	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-5.2237
chr9	114422191	114422254	protein_coding	Trim71	exon	ENSMUSG00000079259	ProperStrand	162	chr7	52382753	52382799	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	5	-18.5279
chr12	36819645	36819661	protein_coding	Bzw2	exon	ENSMUSG00000020547	ProperStrand	29	chr1	183853750	183853767	protein_coding	Enah	exon	ENSMUSG00000022995	NonProperStrand	33	1	-15.9625
chr11	84042523	84045163	protein_coding	Acaca	exon	ENSMUSG00000020532	ProperStrand	100	chr9	64022856	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-7.0085
chr11	69870769	69870785	protein_coding	Asgr1	exon	ENSMUSG00000020884	NonProperStrand	145	chr15	96274466	96274516	protein_coding	Scaf11	exon	ENSMUSG00000033228	ProperStrand	37	1	-12.5185
chr18	42805538	42805554	protein_coding	Ppp2r2b	exon	ENSMUSG00000024500	NonProperStrand	95	chr4	116826699	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-5.8751
chr1	136527271	136527316	protein_coding	Kdm5b	exon	ENSMUSG00000042207	ProperStrand	223	chrX	99445995	99446012	protein_coding	Cited1	utr5	ENSMUSG00000051159	ProperStrand	72	1	-10.3141
chr9	15120943	15121015	snoRNA	ENSMUSG00000065265_SNORA32	.	ENSMUSG00000065265	ProperStrand	101	chr5	108336408	108336495	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-3.8907
chr5	77738902	77738918	protein_coding	Noa1	exon	ENSMUSG00000036285	ProperStrand	147	chr19	8799048	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-4.1061
chr5	92914346	92934243	protein_coding	Scarb2	exon	ENSMUSG00000029426	ProperStrand	30	chr19	8800395	8800479	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-8.0393
chr8	109067760	109068060	protein_coding	Cdh3	exon	ENSMUSG00000061048	ProperStrand	62	chr2	32818833	32818879	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	2	-8.8624
chrX	93136011	93136027	protein_coding	Las1l	exon	ENSMUSG00000057421	ProperStrand	248	chr1	162965980	162966006	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-1.2563
chr14	25312647	25312711	protein_coding	Rps24	exon	ENSMUSG00000025290	ProperStrand	110	chr7	151022619	151023675	protein_coding	Dhcr7	exon	ENSMUSG00000058454	ProperStrand	30	3	-inf
chr4	128867196	128896129	protein_coding	Yars	exon	ENSMUSG00000028811	ProperStrand	131	chr16	23110827	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	7	-1.7615
chr7	91900810	91900827	lincRNA	2610206C17Rik	intron	ENSMUSG00000085236	ProperStrand	13	chr6	86906335	86906389	protein_coding	Aak1	exon	ENSMUSG00000057230	ProperStrand	22	1	-18.4637
chr6	142211245	142214830	protein_coding	Slco1a5	exon	ENSMUSG00000063975	NonProperStrand	38	chr7	29136525	29136583	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.1665
chr3	95021931	95022011	lincRNA	Gm16740	intron	ENSMUSG00000085137	NonProperStrand	1	chr3	95021672	95021762	protein_coding	Gabpb2	utr5	ENSMUSG00000038766	ProperStrand	39	1	-inf
chr19	29370218	29370247	protein_coding	Jak2	exon	ENSMUSG00000024789	ProperStrand	4	chr7	29136525	29136615	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-12.8965
chr2	90235298	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr16	88244835	88244854	protein_coding	Grik1	intron	ENSMUSG00000022935	NonProperStrand	20	2	-10.7530
chr9	59518276	59518366	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr10	126954014	126954094	protein_coding	Ndufa4l2	utr3	ENSMUSG00000040280	ProperStrand	18	2	-15.2376
chr3	151057661	151057751	LINE	L1MDa	L1	chr3L1MDa151057613	ProperStrand	1	chr3	151057867	151057957	LINE	L1MDa	L1	chr3L1MDa151057869	ProperStrand	1	1	-inf
chr8	24042846	24042864	protein_coding	Myst3	exon	ENSMUSG00000031540	ProperStrand	111	chr11	55296276	55296332	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-4.9791
chr12	4716248	4716320	protein_coding	Itsn2	intron	ENSMUSG00000020640	ProperStrand	33	chr4	131908255	131908345	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.3621
chr8	73297657	73297757	protein_coding	Pik3r2	intron	ENSMUSG00000031834	ProperStrand	22	chr3	152450610	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	1	-10.8333
chr4	153410349	153410365	protein_coding	Ccdc27	exon	ENSMUSG00000039492	ProperStrand	94	chr4	106122711	106122727	protein_coding	Pcsk9	exon	ENSMUSG00000044254	ProperStrand	2	1	-20.0624
chr1	93263065	93263081	protein_coding	Fam132b	exon	ENSMUSG00000047443	NonProperStrand	98	chr4	41673405	41673421	protein_coding	Il11ra1	intron	ENSMUSG00000073889	ProperStrand	128	1	-10.8062
chr8	11479343	11479360	lincRNA	E230013L22Rik	exon	ENSMUSG00000090605	NonProperStrand	1	chr12	114147565	114147782	protein_coding	Jag2	exon	ENSMUSG00000002799	ProperStrand	28	1	-inf
chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	chr3	40506791	40506849	protein_coding	Intu	utr3	ENSMUSG00000060798	NonProperStrand	17	1	-12.1393
chr10	6063958	6063978	protein_coding	Akap12	intron	ENSMUSG00000038587	ProperStrand	1008	chr11	22736722	22736822	protein_coding	Commd1	utr3	ENSMUSG00000051355	ProperStrand	36	1	-8.7004
chr7	123476699	123476771	snoRNA	ENSMUSG00000064741_Snord14a	.	ENSMUSG00000064741	ProperStrand	83	chr11	69481366	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	13	-19.4555
chr7	52974954	52975296	protein_coding	Rpl18	exon	ENSMUSG00000059070	ProperStrand	116	chr8	129468760	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	3	-8.0355
chr7	52262686	52262705	protein_coding	Scaf1	exon	ENSMUSG00000038406	ProperStrand	81	chr17	35087895	35087965	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-4.6209
chr2	90235304	90235341	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	104494098	104494198	protein_coding	Nudt9	utr3	ENSMUSG00000029310	ProperStrand	9	1	-8.2671
chr7	28146782	28146798	protein_coding	Spnb4	exon	ENSMUSG00000011751	NonProperStrand	84	chr7	116664841	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	5	-9.8956
chr1	84724486	84724536	protein_coding	Trip12	intron	ENSMUSG00000026219	ProperStrand	248	chr3	100726559	100726577	protein_coding	Trim45	utr5	ENSMUSG00000033233	ProperStrand	59	1	-10.5018
chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	chr10	126987283	126987667	protein_coding	Lrp1	exon	ENSMUSG00000040249	ProperStrand	151	1	-7.6018
chr13	9833565	9833664	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr7	52381722	52381800	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	3	-1.7075
chr16	24660875	24660965	protein_coding	Lpp	intron	ENSMUSG00000033306	NonProperStrand	189	chr16	24750507	24750587	protein_coding	Lpp	intron	ENSMUSG00000033306	ProperStrand	38	1	-11.9336
chr13	55416452	55416542	protein_coding	Nsd1	utr3	ENSMUSG00000021488	ProperStrand	186	chr11	97643008	97643088	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-0.8167
chr6	83320389	83320456	protein_coding	Tet3	exon	ENSMUSG00000034832	ProperStrand	10	chr17	24857795	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-5.6778
chr1	66767367	66767412	protein_coding	1110028C15Rik	exon	ENSMUSG00000026004	ProperStrand	3	chr10	23505152	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-12.0722
chrX	162843420	162843501	protein_coding	Ofd1	exon	ENSMUSG00000040586	ProperStrand	8	chr18	35716788	35716878	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-5.9895
chr13	21536040	21536056	protein_coding	Zfp187	utr3	ENSMUSG00000022228	ProperStrand	7	chr9	15119631	15119689	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-6.8089
chr1	48164574	48164654	LINE	L1_Mus3	L1	chr1L1_Mus348163767	NonProperStrand	1	chr4	78579315	78579405	LINE	L1_Mus3	L1	chr4L1_Mus378578951	NonProperStrand	1	1	-inf
chr7	13516163	13516190	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr10	107800762	107800839	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	1	-3.5644
chr2	127190760	127190850	protein_coding	Adra2b	utr3	ENSMUSG00000058620	ProperStrand	51	chrX	71517854	71517934	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-6.8681
chr3	51060377	51060477	protein_coding	Elf2	exon	ENSMUSG00000037174	ProperStrand	21	chr17	24857802	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	5	-17.3783
chr1	185857228	185857244	protein_coding	1700056E22Rik	exon	ENSMUSG00000044854	ProperStrand	173	chr3	123210899	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-1.3357
chr7	123476683	123476762	snoRNA	ENSMUSG00000064741_Snord14a	.	ENSMUSG00000064741	ProperStrand	83	chr19	8799021	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-5.1989
chr7	20310068	20310100	protein_coding	Pvrl2	exon	ENSMUSG00000062300	ProperStrand	110	chr11	69481342	69481459	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-2.1512
chr9	72595223	72595246	protein_coding	Nedd4	utr3	ENSMUSG00000032216	ProperStrand	308	chr3	85942725	85942756	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	1	-6.4636
chr7	140190602	140190884	protein_coding	Ctbp2	exon	ENSMUSG00000030970	ProperStrand	89	chr9	40612834	40612920	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	1	-8.7536
chr11	84799678	84799738	protein_coding	Usp32	utr3	ENSMUSG00000000804	ProperStrand	45	chr19	8800361	8800451	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-4.0675
chr5	122009145	122009161	LTR	RMER10B	ERVL	chr5RMER10B122008981	NonProperStrand	44	chr7	117189861	117189930	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-6.8243
chr12	20922128	20922168	pseudogene	3110053B16Rik	.	ENSMUSG00000085642	ProperStrand	7	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-9.5818
chr3	90056172	90056262	protein_coding	Slc39a1	exon	ENSMUSG00000052310	ProperStrand	6	chr5	108336389	108336469	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-9.5743
chr9	59516866	59518315	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chrX	7752870	7752886	protein_coding	Tbc1d25	exon	ENSMUSG00000039201	ProperStrand	126	1	-5.7149
chr7	117235433	117236592	protein_coding	Zfp143	utr3	ENSMUSG00000061079	ProperStrand	4	chr11	69483136	69483265	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-7.8378
chr14	51427119	51427219	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr1	37898095	37898111	protein_coding	Tsga10	exon	ENSMUSG00000060771	ProperStrand	79	1	-6.6632
chr16	91785592	91793863	protein_coding	Itsn1	exon	ENSMUSG00000022957	ProperStrand	172	chr17	23956358	23956380	protein_coding	Srrm2	utr3	ENSMUSG00000039218	ProperStrand	521	1	-6.8894
chr6	85412190	85414872	protein_coding	Cct7	exon	ENSMUSG00000030007	ProperStrand	173	chr7	117190020	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-1.5577
chr11	97539893	97539926	protein_coding	Mllt6	exon	ENSMUSG00000038437	ProperStrand	110	chr9	120039623	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.2589
chr8	11427556	11427572	protein_coding	Col4a2	exon	ENSMUSG00000031503	ProperStrand	74	chr2	26494735	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-4.7741
chr3	151898547	151898568	protein_coding	Fubp1	utr3	ENSMUSG00000028034	ProperStrand	56	chr15	79908957	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	3	-13.0314
chr13	31936258	31936280	protein_coding	Gmds	intron	ENSMUSG00000038372	ProperStrand	27	chr19	8800377	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-8.3573
chr17	31640574	31640590	protein_coding	Wdr4	exon	ENSMUSG00000024037	NonProperStrand	18	chr4	131908688	131908794	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.1942
chr11	69730265	69730365	protein_coding	Eif5a	utr3	ENSMUSG00000078812	ProperStrand	164	chr17	24665420	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-3.0613
chrX	47945310	47945346	lincRNA	6720401G13Rik	intron	ENSMUSG00000085396	ProperStrand	34	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	5	-17.3623
chr3	14565743	14565767	protein_coding	Lrrcc1	exon	ENSMUSG00000027550	ProperStrand	39	chr16	23110827	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-2.5911
chr2	170200171	170200188	antisense	1700040N02Rik	.	ENSMUSG00000086999	ProperStrand	25	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-9.5028
chr15	54893661	54893684	protein_coding	Taf2	exon	ENSMUSG00000037343	ProperStrand	18	chr7	116664841	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-4.7864
chr16	16323854	16323870	protein_coding	Dnm1l	exon	ENSMUSG00000022789	NonProperStrand	38	chr1	141319671	141319687	protein_coding	Zbtb41	utr5	ENSMUSG00000033964	NonProperStrand	145	1	-12.4648
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr2	31924012	31924028	protein_coding	Fam78a	utr3	ENSMUSG00000050592	NonProperStrand	340	1	-4.4021
chr6	70794802	70794820	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chr15	79908928	79909019	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-3.6752
chr13	95105250	95105340	LINE	L1VL4	L1	chr13L1VL495105197	NonProperStrand	1	chr13	95105371	95105451	LINE	Lx	L1	chr13Lx95105368	NonProperStrand	1	1	-inf
chr4	133686408	133686509	protein_coding	Ccdc21	utr3	ENSMUSG00000037443	ProperStrand	112	chr17	24665449	24665500	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	20	-inf
chr12	25393895	25394200	protein_coding	Rrm2	exon	ENSMUSG00000020649	ProperStrand	65	chr17	35089181	35089228	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-5.3290
chr13	84397402	84399748	protein_coding	Tmem161b	exon	ENSMUSG00000035762	ProperStrand	22	chr3	152450609	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	1	-10.8333
chr3	101987930	101988020	protein_coding	Vangl1	exon	ENSMUSG00000027860	ProperStrand	25	chr15	79913303	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-5.2686
chr15	82725599	82725636	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	chr1	130048452	130048481	protein_coding	R3hdm1	utr5	ENSMUSG00000056211	ProperStrand	43	2	-14.5768
chr13	55415885	55416907	protein_coding	Nsd1	utr3	ENSMUSG00000021488	ProperStrand	186	chr16	23110545	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	4	-3.9970
chr7	108552841	108552902	protein_coding	Arap1	exon	ENSMUSG00000032812	ProperStrand	23	chr1	46132899	46132916	protein_coding	Dnahc7b	intron	ENSMUSG00000041144	NonProperStrand	57	1	-15.3331
chr17	39979944	39980010	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr10	5312809	5312827	protein_coding	Syne1	intron	ENSMUSG00000019769	ProperStrand	49	2	-12.2180
chr5	74489202	74489317	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr8	40681587	40681603	protein_coding	Msr1	intron	ENSMUSG00000025044	ProperStrand	138	1	-4.0221
chr1	89122446	89122546	protein_coding	Eif4e2	exon	ENSMUSG00000026254	ProperStrand	26	chr2	32818880	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-7.1298
chr6	7805979	7806014	protein_coding	C1galt1	intron	ENSMUSG00000042460	ProperStrand	8	chr7	29136597	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-14.8002
chr16	91729702	91729723	protein_coding	Itsn1	utr5	ENSMUSG00000022957	ProperStrand	172	chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	1	-6.9667
chr13	25354120	25354136	protein_coding	Nrsn1	exon	ENSMUSG00000048978	ProperStrand	24	chr4	131908379	131908445	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.9196
chr7	52289157	52289216	protein_coding	Prr12	exon	ENSMUSG00000046574	ProperStrand	86	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-7.4409
chr6	115758078	115758132	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr19	8963032	8963048	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-2.5455
chr7	26472435	26472451	protein_coding	Tgfb1	utr5	ENSMUSG00000002603	NonProperStrand	154	chr11	106362556	106362607	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-5.5459
chr14	57676676	57676692	protein_coding	Gja3	utr5	ENSMUSG00000048582	ProperStrand	34	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.7115
chr2	37255577	37255607	snoRNA	ENSMUSG00000077756_Snord90	.	ENSMUSG00000077756	ProperStrand	167	chr1	89673731	89673788	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	3	-4.4946
chr11	40550005	40550025	protein_coding	Nudcd2	exon	ENSMUSG00000020328	ProperStrand	34	chr3	123210896	123210986	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	7	-18.8919
chr4	133261476	133261492	protein_coding	Arid1a	intron	ENSMUSG00000007880	NonProperStrand	7	chrX	34622906	34622990	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-7.4170
chr6	72849785	72849875	protein_coding	Kcmf1	utr5	ENSMUSG00000055239	ProperStrand	26	chr10	23505200	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	9	-inf
chr2	32236744	32236818	protein_coding	1110008P14Rik	intron	ENSMUSG00000039195	ProperStrand	5	chr4	141783970	141783996	protein_coding	Kazn	intron	ENSMUSG00000040606	ProperStrand	123	2	-19.8020
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr13	76192773	76192792	protein_coding	Gpr150	utr3	ENSMUSG00000045509	NonProperStrand	63	1	-4.3696
chr9	64025175	64025275	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	chr11	83107863	83107902	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	1	-4.2934
chr15	79249341	79249412	protein_coding	Csnk1e	utr3	ENSMUSG00000022433	ProperStrand	59	chr12	17552968	17553058	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-5.1218
chr4	126703456	126704091	protein_coding	Sfpq	exon	ENSMUSG00000028820	ProperStrand	340	chr7	67125763	67125817	snoRNA	ENSMUSG00000089375_Snord107	.	ENSMUSG00000089375	ProperStrand	451	1	-5.8342
chr18	57400307	57400324	protein_coding	Megf10	exon	ENSMUSG00000024593	ProperStrand	143	chr6	71832629	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-3.9451
chr10	77512874	77513377	protein_coding	Dnmt3l	exon	ENSMUSG00000000730	ProperStrand	37	chr1	162965555	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.1770
chr9	65952561	65952641	protein_coding-noncoding	Snx1	utr3	ENSMUSG00000032382	NonProperStrand	1	chr9	65952729	65952819	protein_coding	Snx1	intron	ENSMUSG00000032382	NonProperStrand	3	1	-inf
chr7	87883899	87883945	protein_coding	Iqgap1	exon	ENSMUSG00000030536	ProperStrand	43	chr7	117189970	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.9505
chr8	64348571	64348651	antisense	4930512H18Rik	.	ENSMUSG00000086866	ProperStrand	2	chr5	13307145	13307235	protein_coding	Sema3a	intron	ENSMUSG00000028883	ProperStrand	7	1	-inf
chr8	24048970	24049060	protein_coding	Myst3	exon	ENSMUSG00000031540	ProperStrand	111	chr14	33005158	33005238	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-2.8699
chr6	148869743	148877077	protein_coding	Fam60a	utr3	ENSMUSG00000039985	ProperStrand	68	chr2	26768383	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	2	-8.7853
chr1	162133713	162133769	protein_coding	Cacybp	exon	ENSMUSG00000014226	ProperStrand	39	chr10	23505194	23505284	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.8710
chr13	53110975	53110991	SINE	B4	B4	chr13B453110717	ProperStrand	10	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.0395
chr17	45705387	45706532	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr1	162968214	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	3	-3.1470
chr16	23110982	23111506	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr1	89673512	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	2	-0.7112
chr13	114113333	114113350	protein_coding	BC067074	exon	ENSMUSG00000021763	NonProperStrand	62	chr11	69483194	69483237	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.3941
chr9	70504444	70504461	protein_coding	Fam63b	exon	ENSMUSG00000042444	ProperStrand	8	chr17	32799197	32804766	protein_coding	Cyp4f40	exon	ENSMUSG00000090700	ProperStrand	1	1	-inf
chr8	3803260	3803340	misc_RNA	RNaseP_nuc	.	ENSMUSG00000088025	ProperStrand	328	chr5	116011498	116012495	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	5	-inf
chr18	60937515	60938107	protein_coding	Rps14	exon	ENSMUSG00000024608	ProperStrand	154	chr9	15119666	15119766	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.1640
chr1	36575962	36576000	protein_coding	Cnnm3	intron	ENSMUSG00000001138	ProperStrand	58	chr17	35299551	35299641	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	8	-inf
mmu-miR-2137	0	19	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	chr15	10504979	10504995	protein_coding	Rai14	exon	ENSMUSG00000022246	ProperStrand	180	1	-9.3537
chr12	99715002	99715021	protein_coding	Kcnk10	intron	ENSMUSG00000033854	NonProperStrand	37	chr2	166890780	166890831	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	1	-11.3567
chr4	106071658	106071677	protein_coding	Usp24	exon	ENSMUSG00000028514	ProperStrand	74	chr2	32818855	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	3	-11.9108
chr2	31070031	31071617	protein_coding	Gpr107	utr3	ENSMUSG00000000194	ProperStrand	99	chr2	26494708	26494840	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	3	-6.0253
chr18	38062784	38062801	protein_coding	Diap1	exon	ENSMUSG00000024456	ProperStrand	77	chr3	151849241	151849341	protein_coding	Dnajb4	intron	ENSMUSG00000028035	ProperStrand	6	3	-20.8556
chr15	8592281	8592298	protein_coding	Slc1a3	exon	ENSMUSG00000005360	ProperStrand	10	chr16	84861716	84861811	protein_coding	Gabpa	utr3	ENSMUSG00000008976	ProperStrand	38	1	-17.9793
chr7	73234104	73234141	protein_coding	H47	utr3	ENSMUSG00000075701	ProperStrand	1	chr7	29136552	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-inf
chr2	127613333	127613349	protein_coding	Nphp1	intron	ENSMUSG00000027378	ProperStrand	7	chr2	26494775	26494825	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-7.3461
chr11	70465716	70466361	protein_coding	Pfn1	exon	ENSMUSG00000018293	ProperStrand	55	chr10	80077477	80077567	protein_coding	Scamp4	utr3	ENSMUSG00000078441	ProperStrand	54	1	-13.7021
chr11	62590598	62590631	snoRNA	ENSMUSG00000064692_SNORA67	.	ENSMUSG00000064692	ProperStrand	185	chr9	40611685	40611739	snoRNA	ENSMUSG00000075876_Snord14c	.	ENSMUSG00000075876	ProperStrand	104	3	-inf
chr11	75570410	75570489	protein_coding	Ywhae	exon	ENSMUSG00000020849	ProperStrand	176	chr1	181320405	181320428	protein_coding	Smyd3	intron	ENSMUSG00000055067	NonProperStrand	190	1	-8.8452
chr15	28241092	28241916	protein_coding	Dnahc5	exon	ENSMUSG00000022262	ProperStrand	6	chr7	50114360	50114475	protein_coding	Gm2381	intron	ENSMUSG00000092225	ProperStrand	9	1	-18.9485
chr1	174220741	174220855	protein_coding	Atp1a2	exon	ENSMUSG00000007097	ProperStrand	12	chr16	57391758	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	1	-11.0666
chr7	26180609	26180627	protein_coding	Lipe	exon	ENSMUSG00000003123	ProperStrand	24	chr14	52391838	52391854	protein_coding	Ang4	intron	ENSMUSG00000060615	NonProperStrand	1	1	-inf
chr19	5666203	5666264	protein_coding	Pcnxl3	exon	ENSMUSG00000054874	ProperStrand	96	chr2	145077959	145209256	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-6.7891
chr4	130484649	130485406	protein_coding	Laptm5	exon	ENSMUSG00000028581	ProperStrand	34	chr18	33954917	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	5	-18.0521
chrX	71598716	71598769	protein_coding	Lage3	exon	ENSMUSG00000015289	ProperStrand	2	chr11	69483181	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-9.6187
chr11	71968063	71968080	protein_coding	4933427D14Rik	utr3	ENSMUSG00000020807	ProperStrand	13	chr2	26494762	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-6.0562
chr1	190795473	190795532	protein_coding	Kctd3	utr3	ENSMUSG00000026608	ProperStrand	28	chr16	23110455	23110545	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.8373
chr4	131908152	131909231	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr4	131908232	131908450	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	167	-20.4065
chr7	59117880	59117899	protein_coding	Gas2	utr5	ENSMUSG00000030498	ProperStrand	10	chr11	69483136	69483190	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-5.8555
chr9	118462693	118464775	protein_coding	Golga4	utr3	ENSMUSG00000038708	ProperStrand	95	chr11	69483134	69483192	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.7050
chr3	87717987	87718089	protein_coding	Hdgf	exon	ENSMUSG00000004897	ProperStrand	117	chr5	74489640	74489676	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-2.5772
chrX	20506745	20506765	protein_coding	Cfp	exon	ENSMUSG00000001128	NonProperStrand	3	chr4	131865855	131865952	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-13.1721
chr1	7143511	7143557	protein_coding	Pcmtd1	intron	ENSMUSG00000051285	ProperStrand	19	chr11	6319538	6319576	protein_coding	Ppia	exon	ENSMUSG00000071866	ProperStrand	127	2	-23.1291
chr17	68152256	68152273	protein_coding	Lama1	exon	ENSMUSG00000032796	ProperStrand	168	chr10	90432659	90432677	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	1	-8.5572
chr1	53924798	53924815	protein_coding	Hecw2	intron	ENSMUSG00000042807	ProperStrand	39	chr16	23110828	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.7347
chr13	97903658	97905260	protein_coding	Nsa2	exon	ENSMUSG00000060739	ProperStrand	9	chr12	106269284	106269384	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-7.9279
chr2	32818851	32818941	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	chr10	90581055	90581195	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	13	-4.4257
chr9	104218697	104218714	protein_coding	Acpp	intron	ENSMUSG00000032561	ProperStrand	17	chr7	52714528	52714580	protein_coding	Ftl1	exon	ENSMUSG00000050708	ProperStrand	807	1	-10.6710
chr9	120842710	120859344	protein_coding	Ctnnb1	utr5	ENSMUSG00000006932	ProperStrand	214	chr7	150717298	150717348	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-3.1087
chr7	52263666	52263682	protein_coding	Scaf1	exon	ENSMUSG00000038406	ProperStrand	81	chr4	131865854	131865969	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.3246
chr11	3539926	3539977	lincRNA	Tug1	exon	ENSMUSG00000056579	ProperStrand	15	chr4	122968584	122968660	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	2	-14.4654
chr19	5797603	5797656	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr7	134336036	134336063	protein_coding	Cd2bp2	utr3	ENSMUSG00000042502	ProperStrand	73	2	-11.4952
chr12	82119748	82119770	Other	RMER1A	Other	chr12RMER1A82119000	ProperStrand	1	chr8	125679086	125679133	protein_coding	Sult5a1	intron	ENSMUSG00000000739	ProperStrand	1	1	-inf
chr9	15119287	15119417	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	chr1	162968438	162968510	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	4	-0.8238
chr16	20660441	20661659	protein_coding	Psmd2	exon	ENSMUSG00000006998	ProperStrand	99	chr11	68886974	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-3.2168
chr9	4299367	4302483	protein_coding	Aasdhppt	exon	ENSMUSG00000025894	ProperStrand	121	chr8	72287172	72287188	protein_coding	Zfp866	utr3	ENSMUSG00000043090	NonProperStrand	134	1	-10.2918
chr1	64112822	64112909	protein_coding	Klf7	intron	ENSMUSG00000025959	ProperStrand	9	chr16	23110967	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.9939
chr9	50448345	50452132	protein_coding	Dlat	exon	ENSMUSG00000000168	ProperStrand	26	chr2	179936691	179936764	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	1	-11.3870
chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	chr2	38859644	38859691	protein_coding	Rpl35	exon	ENSMUSG00000062997	ProperStrand	68	1	-7.9088
chr15	98685993	98686062	protein_coding	Mll2	exon	ENSMUSG00000048154	ProperStrand	170	chr3	89868076	89868102	protein_coding	1700094D03Rik	intron	ENSMUSG00000078667	ProperStrand	7	4	-inf
chr11	106672523	106672539	protein_coding	Ccdc45	exon	ENSMUSG00000018372	ProperStrand	17	chr14	76247711	76247778	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-6.6490
chr11	95824577	95824649	protein_coding	Igf2bp1	utr3	ENSMUSG00000013415	ProperStrand	140	chr1	162965993	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	3	-5.7521
chr12	114350408	114355260	protein_coding	Mta1	exon	ENSMUSG00000021144	ProperStrand	74	chr17	24857724	24857814	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.9536
chr9	122965553	122965570	protein_coding	Tgm4	exon	ENSMUSG00000025787	NonProperStrand	11	chr1	33828651	33828669	protein_coding	Zfp451	intron	ENSMUSG00000042197	NonProperStrand	393	1	-13.0128
chr8	13159389	13159405	protein_coding	Lamp1	exon	ENSMUSG00000031447	ProperStrand	92	chr7	117166775	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-4.0022
chr7	52382237	52382269	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	2	-1.8577
chr17	12876531	12876556	protein_coding	Igf2r	utr3	ENSMUSG00000023830	ProperStrand	151	chr2	26494708	26494824	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.5739
chr13	96374713	96374729	protein_coding	F2r	exon	ENSMUSG00000048376	NonProperStrand	88	chr11	62416971	62416992	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-5.2937
mmu-miR-3963	3	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr11	6428033	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	11	-1.0418
chr2	90235304	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	51505825	51505910	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	3	-2.3956
chr15	85706659	85706702	protein_coding	Gtse1	utr3	ENSMUSG00000022385	ProperStrand	74	chr19	36967063	36967086	protein_coding	Tnks2	utr3	ENSMUSG00000024811	ProperStrand	133	1	-11.2938
chr2	29946728	29946746	protein_coding	Zdhhc12	utr3	ENSMUSG00000015335	ProperStrand	24	chrX	34622958	34623003	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-4.9020
chr9	15119666	15119766	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	chr2	18508668	18508696	tRNA	tRNA1947-AsnGTT	.	188020	ProperStrand	179	1	-0.9716
chr12	47801446	47801493	protein_coding	Nova1	exon	ENSMUSG00000021047	ProperStrand	3	chr18	35714145	35714235	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-9.6483
chr16	14299956	14300046	protein_coding	0610037P05Rik	utr3	ENSMUSG00000022677	ProperStrand	6	chr17	24857763	24857843	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	6	-inf
chr5	21280773	21280847	protein_coding	Dnajc2	exon	ENSMUSG00000029014	ProperStrand	31	chr12	112779177	112779267	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-6.0689
chr15	73415764	73415800	protein_coding	Slc45a4	exon	ENSMUSG00000079020	ProperStrand	127	chr11	6428078	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.9123
chr11	75492928	75493028	protein_coding	Crk	exon	ENSMUSG00000017776	ProperStrand	31	chr11	48614366	48614435	snoRNA	ENSMUSG00000064500_SNORD95	.	ENSMUSG00000064500	ProperStrand	100	1	-13.6243
chr7	29171540	29171558	protein_coding	Med29	utr3	ENSMUSG00000003444	NonProperStrand	134	chr13	100202158	100202175	protein_coding	Mtap1b	exon	ENSMUSG00000052727	NonProperStrand	20	1	-13.9280
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr17	35972511	35972611	protein_coding	Tubb5	exon	ENSMUSG00000001525	ProperStrand	624	1	-2.0363
chr7	97601233	97601260	protein_coding	Tmem126a	exon	ENSMUSG00000030615	ProperStrand	22	chr11	97642952	97643080	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.3090
chr2	26773000	26774394	protein_coding	Surf2	exon	ENSMUSG00000014873	ProperStrand	12	chr12	112779262	112779283	protein_coding	Eif5	intron	ENSMUSG00000021282	ProperStrand	125	1	-15.1074
chr4	151420726	151424716	protein_coding	Nol9	exon	ENSMUSG00000028948	ProperStrand	93	chr3	123210854	123210870	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-2.6406
chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr11	98623093	98623110	protein_coding	Thra	exon	ENSMUSG00000058756	ProperStrand	63	1	-6.3577
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr2	152076478	152076526	protein_coding-noncoding	Csnk2a1	utr5	ENSMUSG00000074698	ProperStrand	2	2	-inf
chr2	57900146	57900162	protein_coding	Ermn	utr3	ENSMUSG00000026830	ProperStrand	27	chr5	30960350	30960366	protein_coding	4930471M23Rik	utr3	ENSMUSG00000029175	ProperStrand	67	1	-14.7116
chr17	45704136	45704153	protein_coding	Slc35b2	exon	ENSMUSG00000037089	ProperStrand	55	chr8	32260335	32260433	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	2	-7.9422
chr2	174794183	174794283	LTR	MuRRS4-int	ERV1	chr2MuRRS4-int174793939	ProperStrand	1	chr11	51418306	51418966	protein_coding	Hnrnpab	exon	ENSMUSG00000020358	NonProperStrand	4	1	-inf
chr10	80642923	80642939	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr7	127979054	127979074	tRNA	tRNA861-LeuTAG	.	1739073	ProperStrand	49	1	-6.4994
chr12	82825087	82825103	protein_coding	Map3k9	exon	ENSMUSG00000042724	ProperStrand	92	chr11	69719758	69719877	protein_coding	Neurl4	exon	ENSMUSG00000047284	ProperStrand	28	2	-19.9465
chr5	137754297	137754652	protein_coding	Trip6	exon	ENSMUSG00000023348	ProperStrand	6	chr11	62416625	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-9.8702
chr6	3794656	3794674	SINE	B4A	B4	chr6B4A3794525	NonProperStrand	26	chr9	21490460	21490476	protein_coding	Smarca4	exon	ENSMUSG00000032187	ProperStrand	196	1	-12.6328
chrX	54558254	54558272	protein_coding	Arhgef6	intron	ENSMUSG00000031133	ProperStrand	20	chr3	108357419	108357503	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-6.7034
chr2	121275910	121275931	protein_coding-noncoding	Serf2	utr5	ENSMUSG00000074884	ProperStrand	5	chr17	24857717	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-11.8657
chr15	84040938	84041010	protein_coding	Samm50	exon	ENSMUSG00000022437	ProperStrand	51	chr9	15119728	15119969	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.9150
chr7	26181911	26202421	protein_coding	Lipe	intron	ENSMUSG00000003123	NonProperStrand	63	chr19	6059361	6059388	protein_coding	Fau	exon	ENSMUSG00000038274	ProperStrand	64	1	-13.0853
chr15	77593711	77594224	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr4	108829308	108829324	protein_coding	Osbpl9	utr5	ENSMUSG00000028559	ProperStrand	17	2	-17.9789
chr17	24837876	24837892	protein_coding	Tbl3	exon	ENSMUSG00000040688	ProperStrand	42	chr7	116663633	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.1409
chr7	36331867	36331885	SINE	RSINE1	B4	chr7RSINE136331860	NonProperStrand	11	chr4	131908397	131908460	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	1	-10.7099
chr9	40610701	40610860	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr10	20080843	20080859	protein_coding	Fam54a	utr3	ENSMUSG00000019992	ProperStrand	232	1	-5.4683
chr1	36599169	36599259	protein_coding	Ankrd39	intron	ENSMUSG00000079610	NonProperStrand	1	chr9	71432010	71432090	protein_coding	Gcom1	intron	ENSMUSG00000092137	ProperStrand	55	1	-inf
chr17	27242547	27243152	protein_coding	Itpr3	exon	ENSMUSG00000042644	NonProperStrand	2	chr11	69483139	69483277	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-9.6187
chr9	54768317	54768333	protein_coding	Agphd1	exon	ENSMUSG00000035878	NonProperStrand	19	chr11	6428035	6428119	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-8.8884
chr6	8720475	8720494	protein_coding	Ica1	utr5	ENSMUSG00000062995	ProperStrand	13	chr7	29136575	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-8.6857
chr18	10052130	10052153	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr7	30026273	30026289	protein_coding	Yif1b	intron	ENSMUSG00000030588	ProperStrand	154	1	-6.9237
chr18	78271218	78271237	LTR	MTD	MaLR	chr18MTD78271213	ProperStrand	1	chr16	57391669	57391739	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	1	-inf
chr11	120810033	120810051	protein_coding	Slc16a3	intron	ENSMUSG00000025161	ProperStrand	98	chr11	106362640	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-6.4316
chr18	35485423	35485494	protein_coding	Sil1	intron	ENSMUSG00000024357	ProperStrand	31	chr3	123210889	123210979	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.2114
chr2	152716292	152717232	protein_coding	Tpx2	exon	ENSMUSG00000027469	ProperStrand	111	chr12	99756958	99756975	protein_coding	Kcnk10	exon	ENSMUSG00000033854	NonProperStrand	37	1	-13.0553
chr5	67365826	67365844	protein_coding	Limch1	exon	ENSMUSG00000037736	ProperStrand	20	chr4	131908810	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.0012
chr2	121125329	121125419	protein_coding	Mtap1a	exon	ENSMUSG00000027254	NonProperStrand	21	chr16	57391632	57391722	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	1	-12.4328
chr18	80931220	80931242	SINE	MIRb	MIR	chr18MIRb80931176	ProperStrand	4	chr18	80932872	80935479	protein_coding	Atp9b	exon	ENSMUSG00000024566	ProperStrand	30	3	-inf
chr13	69954592	69954682	protein_coding	Med10	utr3	ENSMUSG00000021598	ProperStrand	4	chr7	29136563	29136643	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-7.7378
chr13	21842219	21842309	protein_coding	Hist1h4k	exon	ENSMUSG00000064288	ProperStrand	46	chr7	150717324	150717409	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	37	-20.7410
chr6	125111933	125112023	protein_coding	Gapdh	utr3	ENSMUSG00000057666	ProperStrand	356	chr15	34370600	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-0.7708
chr6	115758007	115758087	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr16	38158136	38158226	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	1	-1.3585
chr3	142457446	142461884	protein_coding	Pkn2	exon	ENSMUSG00000004591	ProperStrand	28	chr7	117189957	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.7726
chr1	80337036	80337113	Low_complexity	G-rich	Low_complexity	chr1G-rich80336973	NonProperStrand	1	chr5	130300445	130300535	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-inf
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr11	69870769	69870785	protein_coding	Asgr1	exon	ENSMUSG00000020884	NonProperStrand	145	1	-6.0479
chr5	54046226	54046290	protein_coding	Rbpj	utr3	ENSMUSG00000039191	ProperStrand	96	chr5	74489596	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-2.9224
chr1	95402134	95403595	protein_coding	Sept2	exon	ENSMUSG00000026276	ProperStrand	136	chr11	77995191	77995228	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	2	-7.6146
chr4	82420552	82420632	LINE	L1Md_A	L1	chr4L1Md_A82418301	ProperStrand	1	chr8	34449575	34449666	protein_coding	Wrn	intron	ENSMUSG00000031583	NonProperStrand	1	1	-inf
chr8	73419296	73419354	protein_coding	Rpl18a	utr3	ENSMUSG00000045128	ProperStrand	394	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-4.4701
chr19	6368395	6371281	protein_coding	Sf1	exon	ENSMUSG00000024949	ProperStrand	251	chr7	51505822	51505884	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	1	-5.7808
chr16	69864288	69864306	LINE	Lx2A1	L1	chr16Lx2A169863625	NonProperStrand	22	chr11	69481381	69481432	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.1045
mmu-miR-6238	2	19	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr9	83285313	83285403	protein_coding	Lca5	utr3	ENSMUSG00000032258	ProperStrand	13	1	-13.6511
chr11	35684496	35689205	protein_coding	Wwc1	exon	ENSMUSG00000018849	ProperStrand	52	chr16	23110968	23111003	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-3.9433
chr11	15212155	15212171	LINE	Lx	L1	chr11Lx15211662	ProperStrand	54	chr1	186806812	186806859	protein_coding	Mark1	intron	ENSMUSG00000026620	ProperStrand	6	1	-18.0672
chr13	47124534	47124634	protein_coding	Tpmt	intron	ENSMUSG00000021376	ProperStrand	10	chr2	26494708	26494775	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	6	-20.2761
chr3	141072138	141072228	LINE	L2	L2	chr3L2141072040	ProperStrand	1	chr3	141071576	141071666	SINE	ID_B1	B4	chr3ID_B1141071572	ProperStrand	1	1	-inf
chr1	174047111	174047372	protein_coding	Copa	exon	ENSMUSG00000026553	ProperStrand	33	chr18	35716751	35716831	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.2115
chr11	4668011	4694446	protein_coding	Nf2	utr3	ENSMUSG00000009073	ProperStrand	72	chr4	131908232	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-2.2645
chr7	19785965	19786474	protein_coding	Eml2	exon	ENSMUSG00000040811	ProperStrand	33	chr5	121890679	121890728	protein_coding	Naa25	utr3	ENSMUSG00000042719	ProperStrand	95	1	-13.5956
chr10	79873821	79873921	protein_coding	Tcf3	intron	ENSMUSG00000020167	ProperStrand	73	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-3.2333
chr15	74394258	74394280	miRNA	AC117657.1	.	ENSMUSG00000093340	ProperStrand	10	chr2	109852871	109852916	protein_coding	Lgr4	utr3	ENSMUSG00000050199	ProperStrand	27	1	-18.6076
chr12	104006356	104006446	protein_coding	Ubr7	exon	ENSMUSG00000041712	ProperStrand	46	chr4	131908705	131908785	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-2.9958
chr7	117418078	117425662	protein_coding	Swap70	utr3	ENSMUSG00000031015	ProperStrand	47	chr10	23505157	23505255	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-6.5006
chr8	86251791	86251830	protein_coding	Cd97	exon	ENSMUSG00000002885	ProperStrand	37	chr8	73303346	73303406	protein_coding	Mast3	exon	ENSMUSG00000031833	ProperStrand	23	3	-19.1955
chr17	35254818	35254959	protein_coding	Csnk2b	exon	ENSMUSG00000024387	ProperStrand	13	chr17	35087895	35087946	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-8.2652
chrX	131226455	131226555	protein_coding	Armcx4	exon	ENSMUSG00000049804	ProperStrand	15	chr19	39699512	39699529	protein_coding	Cyp2c67	intron	ENSMUSG00000062624	NonProperStrand	6	1	-19.9831
chr6	121147675	121147757	protein_coding	Pex26	intron	ENSMUSG00000067825	NonProperStrand	3	chr19	28338405	28338421	protein_coding	Glis3	utr5	ENSMUSG00000091294	NonProperStrand	3	1	-inf
chr18	24050336	24050354	protein_coding	Mapre2	utr3	ENSMUSG00000024277	NonProperStrand	7	chr16	23111695	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.9463
chr11	25752343	25752360	protein_coding	5730522E02Rik	intron	ENSMUSG00000032985	NonProperStrand	20	chr11	106362567	106362633	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-9.6204
chrX	71486845	71487028	protein_coding	Flna	exon	ENSMUSG00000031328	ProperStrand	134	chr10	110918549	110918629	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-2.0526
chr7	7250898	7250916	protein_coding	Clcn4-2	intron	ENSMUSG00000000605	NonProperStrand	10	chr16	23111776	23111811	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.2069
chr9	62992379	62992395	protein_coding	Skor1	exon	ENSMUSG00000022245	NonProperStrand	70	chr18	35714186	35714284	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-3.1624
chr9	64025229	64025572	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	chr15	95775298	95775321	protein_coding	Ano6	intron	ENSMUSG00000064210	ProperStrand	39	1	-9.5458
chr11	58795625	58795641	protein_coding	Trim11	exon	ENSMUSG00000020455	ProperStrand	43	chr1	9932550	9932626	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-8.3968
chr4	148335472	148335546	protein_coding	Pex14	exon	ENSMUSG00000028975	ProperStrand	16	chr13	90238681	90238723	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	1	-11.3288
chr4	133261476	133261492	protein_coding	Arid1a	intron	ENSMUSG00000007880	NonProperStrand	7	chr2	29014439	29014455	protein_coding	Setx	exon	ENSMUSG00000043535	ProperStrand	187	1	-15.4702
chr11	100581379	100581396	protein_coding	Rab5c	utr5	ENSMUSG00000019173	ProperStrand	76	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-8.1201
chr10	80860700	80860717	protein_coding	Nfic	utr3	ENSMUSG00000055053	ProperStrand	69	chr1	89681186	89681286	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	2	-8.4998
chr7	25292454	25300085	protein_coding	Zfp428	exon	ENSMUSG00000064264	ProperStrand	23	chr9	15119731	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.3979
chr15	98428804	98428820	protein_coding	Adcy6	exon	ENSMUSG00000022994	ProperStrand	50	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-3.9434
chr6	10603065	10603154	LINE	L1Md_F3	L1	chr6L1Md_F310602912	ProperStrand	1	chr6	10602434	10602524	LINE	Lx3_Mus	L1	chr6Lx3_Mus10600324	ProperStrand	1	1	-inf
chr2	32078974	32081834	protein_coding	Prrc2b	exon	ENSMUSG00000039262	ProperStrand	344	chr11	69483136	69483267	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	11	-10.2950
chr11	50114523	50125139	protein_coding	Canx	exon	ENSMUSG00000020368	ProperStrand	296	chr3	123210854	123210978	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	8	-5.5409
chr19	5796444	5796502	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr8	46112120	46112136	protein_coding	Fat1	exon	ENSMUSG00000070047	ProperStrand	306	1	-4.3623
mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr2	4181189	4181205	protein_coding	Frmd4a	intron	ENSMUSG00000026657	NonProperStrand	16	1	-8.5577
chr2	120357872	120357920	protein_coding	Zfp106	exon	ENSMUSG00000027288	ProperStrand	199	chr9	108463389	108463939	protein_coding	Impdh2	exon	ENSMUSG00000062867	ProperStrand	74	1	-10.4867
chr10	57946718	57947242	protein_coding	Ranbp2	exon	ENSMUSG00000003226	ProperStrand	52	chr9	120038647	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.2976
chr16	38369597	38369614	protein_coding	Popdc2	exon	ENSMUSG00000022803	ProperStrand	19	chr4	122970410	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	7	-22.3237
chr13	18922628	18922656	protein_coding	Vps41	exon	ENSMUSG00000041236	ProperStrand	31	chr4	131865889	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.8751
chr1	102370779	102370800	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	ProperStrand	5	chr16	23110929	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr6	128324867	128324957	protein_coding	Foxm1	utr3	ENSMUSG00000001517	ProperStrand	31	chr11	97643010	97643090	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.6570
chr11	120587842	120588365	protein_coding	Dcxr	exon	ENSMUSG00000039450	ProperStrand	10	chr4	131908811	131908893	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	8	-inf
chr10	42222242	42245760	protein_coding	Snx3	exon	ENSMUSG00000019804	ProperStrand	19	chr3	103541826	103541844	protein_coding	Olfml3	exon	ENSMUSG00000027848	NonProperStrand	3	1	-inf
chr11	52069782	52070279	protein_coding	Tcf7	exon	ENSMUSG00000000782	ProperStrand	24	chr9	15118246	15118336	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-8.6142
chr15	37948171	37948192	protein_coding	Ubr5	exon	ENSMUSG00000037487	ProperStrand	258	chr11	68886935	68887035	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	2	-2.9916
chr18	32257498	32257559	protein_coding	Iws1	utr3	ENSMUSG00000024384	ProperStrand	72	chr10	23505190	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-0.9949
chr9	64023472	64023519	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	chr11	35067383	35067400	protein_coding	Slit3	intron	ENSMUSG00000056427	ProperStrand	61	1	-8.6463
chr13	55634381	55634453	protein_coding	Ddx41	exon	ENSMUSG00000021494	ProperStrand	45	chr16	23110539	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-7.6189
chr2	28999732	29000136	protein_coding	Setx	exon	ENSMUSG00000043535	ProperStrand	187	chr19	8799036	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	7	-inf
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	32085656	32085705	pseudogene	Gm12109	.	ENSMUSG00000081613	ProperStrand	1	1	-inf
chr7	4746079	4746126	protein_coding	Rpl28	utr3	ENSMUSG00000030432	ProperStrand	220	chr3	101398959	101398997	protein_coding	Atp1a1	exon	ENSMUSG00000033161	ProperStrand	316	4	-inf
chr19	10116351	10116367	protein_coding	Fads3	exon	ENSMUSG00000024664	NonProperStrand	16	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-11.6100
chr13	88569462	88569482	LTR	RMER6D	ERVK	chr13RMER6D88569354	ProperStrand	42	chr17	35089182	35089229	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-6.1870
chr2	22444734	22444792	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	chr5	147646421	147646477	snoRNA	ENSMUSG00000077185_SNORD102	.	ENSMUSG00000077185	ProperStrand	142	2	-9.8525
chr11	59778161	59778177	protein_coding	Rasd1	exon	ENSMUSG00000049892	NonProperStrand	49	chr4	131865460	131865506	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-4.3863
chr18	60936087	60936135	protein_coding	Rps14	exon	ENSMUSG00000024608	ProperStrand	154	chr1	155287312	155287355	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	1	-7.1005
chr1	120355714	120355797	snRNA	ENSMUSG00000080542_U4atac	.	ENSMUSG00000080542	ProperStrand	73	chr1	162967514	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-3.1178
chr10	57942025	57942096	protein_coding	Ranbp2	exon	ENSMUSG00000003226	ProperStrand	52	chr8	32260335	32260369	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-4.9058
chr3	79223176	79223193	protein_coding	Gm17359	intron	ENSMUSG00000091685	NonProperStrand	50	chr16	23110876	23110962	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.0847
chr11	50024200	50024231	protein_coding	Sqstm1	exon	ENSMUSG00000015837	ProperStrand	36	chr7	29136535	29136625	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.2650
chr6	47748515	47748596	protein_coding	Pdia4	exon	ENSMUSG00000025823	ProperStrand	41	chr11	116938597	116938687	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-6.9145
chr11	51414283	51414307	protein_coding	Hnrnpab	utr3	ENSMUSG00000020358	ProperStrand	124	chr9	15119292	15119372	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-3.7288
chr19	41348803	41348819	protein_coding	Pik3ap1	exon	ENSMUSG00000025017	NonProperStrand	26	chr11	98878344	98878371	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-7.9559
chr2	35111956	35111975	protein_coding	Gsn	utr5	ENSMUSG00000026879	NonProperStrand	1	chr1	162968442	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-inf
chr17	4082192	4082246	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	1	-6.0793
chr19	41991311	41992183	protein_coding	Pgam1	exon	ENSMUSG00000011752	NonProperStrand	1	chr11	21583217	21583297	protein_coding	Wdpcp	intron	ENSMUSG00000020319	ProperStrand	9	1	-inf
chr2	146125209	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	chr13	49779676	49779802	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	3	-11.3862
chr7	119236893	119247568	protein_coding	Usp47	exon	ENSMUSG00000059263	ProperStrand	40	chr16	23110828	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.4886
chr15	96839339	96839402	protein_coding	Slc38a4	exon	ENSMUSG00000022464	ProperStrand	139	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	5	-15.1057
chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	chr2	75499806	75499956	protein_coding	Hnrnpa3	exon	ENSMUSG00000059005	ProperStrand	289	1	-6.3628
chr11	116535946	116535982	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr4	120819907	120820007	protein_coding	Rlf	exon	ENSMUSG00000049878	ProperStrand	58	1	-5.9774
chr4	45816960	45817029	protein_coding	Aldh1b1	utr3	ENSMUSG00000035561	ProperStrand	1	chr2	158182158	158182248	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-inf
chr7	13516163	13516202	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr2	26768395	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-1.4652
chr7	31663114	31664217	protein_coding	Cd22	utr5	ENSMUSG00000030577	NonProperStrand	128	chr18	48207423	48207521	protein_coding	Gm5506	exon	ENSMUSG00000059040	ProperStrand	105	3	-20.3996
chr1	20552542	20552558	protein_coding	Pkhd1	exon	ENSMUSG00000043760	NonProperStrand	49	chr13	54848608	54848624	protein_coding	Gprin1	intron	ENSMUSG00000069227	ProperStrand	55	1	-13.8956
chr1	23819831	23819847	protein_coding	B3gat2	intron	ENSMUSG00000026156	ProperStrand	4	chr8	73419743	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-8.6136
mmu-miR-6240	2	23	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr8	59991434	59991450	protein_coding	Hmgb2	exon	ENSMUSG00000054717	NonProperStrand	96	2	-8.2192
chr19	18746923	18747009	protein_coding	2410127L17Rik	intron	ENSMUSG00000024726	ProperStrand	43	chr7	117189991	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	3	-9.6754
chr17	6214735	6214751	protein_coding	Tulp4	exon	ENSMUSG00000034377	NonProperStrand	265	chr10	23505551	23505627	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-4.6409
chr5	32657192	32657208	protein_coding	Plb1	exon	ENSMUSG00000029134	ProperStrand	50	chr3	88715213	88715230	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-7.5979
chr19	53447568	53447600	protein_coding	Mxi1	utr3	ENSMUSG00000025025	ProperStrand	51	chr8	47932453	47932469	protein_coding	Irf2	utr3	ENSMUSG00000031627	ProperStrand	4	1	-22.1640
chr5	99987915	100011077	protein_coding	A930011G23Rik	exon	ENSMUSG00000089809	NonProperStrand	43	chr11	62416598	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-9.4956
chr11	113513363	113513379	protein_coding	Cog1	exon	ENSMUSG00000018661	NonProperStrand	38	chr13	75905592	75905637	snoRNA	ENSMUSG00000077449_SNORA42	.	ENSMUSG00000077449	ProperStrand	26	1	-15.9381
chr4	43505743	43505823	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr2	93039979	93040069	protein_coding	Trp53i11	exon	ENSMUSG00000068735	ProperStrand	46	2	-6.0522
chr4	154267953	154268053	protein_coding	Mmel1	exon	ENSMUSG00000058183	NonProperStrand	2	chr17	71990928	71990999	snoRNA	ENSMUSG00000092713_CT010429.1	.	ENSMUSG00000092713	ProperStrand	182	2	-inf
chr1	153759644	153759664	protein_coding	1700025G04Rik	intron	ENSMUSG00000032666	NonProperStrand	35	chr7	52382753	52382822	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-7.8283
chr5	122908539	122909526	protein_coding	Atp2a2	exon	ENSMUSG00000029467	ProperStrand	166	chr2	153246338	153246354	protein_coding	8430427H17Rik	exon	ENSMUSG00000061411	ProperStrand	19	1	-13.6065
chr2	158107252	158108039	protein_coding	Bpi	exon	ENSMUSG00000052922	ProperStrand	4	chr19	8963027	8963096	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	4	-inf
chr18	35714095	35714153	lincRNA	Snhg4	intron	ENSMUSG00000090430	ProperStrand	270	chr12	88778634	88778724	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	4	-11.8935
chr1	137303370	137303405	protein_coding	Ipo9	exon	ENSMUSG00000041879	ProperStrand	53	chr12	60141466	60141509	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-7.0759
chr11	57931222	57931275	protein_coding	Cnot8	utr3	ENSMUSG00000020515	ProperStrand	12	chr19	8798754	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	4	-19.8456
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr16	38158134	38158224	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	1	-5.7768
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr9	15119335	15119428	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	3	-6.4754
chr15	20083401	20083418	LINE	Lx	L1	chr15Lx20083212	NonProperStrand	14	chr4	131908688	131908749	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.6665
chr1	71615625	71616455	protein_coding	Atic	exon	ENSMUSG00000026192	ProperStrand	30	chr16	23111703	23111793	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.0878
chr19	34999238	34999254	protein_coding	Kif20b	exon	ENSMUSG00000024795	NonProperStrand	28	chr19	36949845	36950730	protein_coding	Tnks2	exon	ENSMUSG00000024811	ProperStrand	133	1	-13.2563
chr2	164630272	164630288	protein_coding	Acot8	exon	ENSMUSG00000017307	ProperStrand	9	chr11	6428132	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-6.9084
chr9	113589150	113589173	protein_coding	Pdcd6ip	exon	ENSMUSG00000032504	ProperStrand	53	chr5	14978218	14978234	protein_coding	Gm10354	intron	ENSMUSG00000072188	NonProperStrand	1	1	-inf
chr17	26115589	26115606	protein_coding	Solh	intron	ENSMUSG00000037326	ProperStrand	53	chr15	5068405	5068424	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-6.3119
chr8	107824309	107824399	protein_coding	E2f4	exon	ENSMUSG00000014859	ProperStrand	32	chr11	68886947	68887033	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-5.3573
chr4	43104114	43108643	protein_coding	Unc13b	exon	ENSMUSG00000028456	ProperStrand	29	chr1	102076757	102076793	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	1	-10.9034
chr19	44368828	44369410	protein_coding	Scd2	utr5	ENSMUSG00000025203	ProperStrand	219	chr15	34370580	34370664	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	17	-20.8566
chr12	68766478	68766512	LINE	L1_Mus2	L1	chr12L1_Mus268766146	ProperStrand	12	chr11	7067186	7069426	protein_coding	Adcy1	exon	ENSMUSG00000020431	ProperStrand	183	1	-14.3571
chr8	13876096	13876203	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	chr5	92485086	92485116	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	1	-2.7916
chr13	74494657	74494674	protein_coding	Ccdc127	utr3	ENSMUSG00000021578	NonProperStrand	54	chr9	98324898	98324915	protein_coding	Rbp1	utr5	ENSMUSG00000046402	ProperStrand	3	1	-inf
chr17	56257328	56257345	LTR	RLTR25B	ERVK	chr17RLTR25B56257276	NonProperStrand	75	chr1	162967734	162967806	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	1	-9.7990
chr9	20746254	20746318	protein_coding	Dnmt1	intron	ENSMUSG00000004099	ProperStrand	91	chr7	29136525	29136599	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.6941
chr2	26767031	26767564	protein_coding	Rpl7a	exon	ENSMUSG00000062647	ProperStrand	234	chr1	162966217	162966253	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-4.9042
chr6	54595561	54595645	protein_coding	Plekha8	utr3	ENSMUSG00000005225	ProperStrand	21	chr15	82980135	82980189	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-9.2533
chr16	32959498	32959522	protein_coding	Lrch3	exon	ENSMUSG00000022801	ProperStrand	9	chr18	76297633	76297649	protein_coding	Zbtb7c	exon	ENSMUSG00000044646	ProperStrand	64	1	-16.9520
chr14	67537512	67537529	protein_coding	Pnma2	utr3	ENSMUSG00000046204	NonProperStrand	16	chr9	15119631	15119759	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.1098
chr7	124992066	124992156	LTR	ORR1D2	MaLR	chr7ORR1D2124991969	ProperStrand	1	chr7	124991855	124991945	LTR	RMER21B	ERV1	chr7RMER21B124991682	NonProperStrand	1	1	-inf
chr14	60205336	60205352	protein_coding	Cdadc1	exon	ENSMUSG00000021982	NonProperStrand	1	chr1	162965980	162966031	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-inf
chr9	121771129	121771209	SINE	B3A	B2	chr9B3A121771136	ProperStrand	1	chr12	113917875	113917965	protein_coding	Zbtb42	exon	ENSMUSG00000037638	NonProperStrand	1	1	-inf
chr13	96283214	96283314	protein_coding	F2rl1	exon	ENSMUSG00000021678	ProperStrand	28	chr1	162967513	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.9223
chr10	90586310	90586410	protein_coding	Slc25a3	exon	ENSMUSG00000061904	ProperStrand	74	chr4	116826700	116826766	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-6.3664
chr8	87605162	87605750	protein_coding	BC056474	exon	ENSMUSG00000059355	ProperStrand	2	chr10	23505167	23505247	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-8.0476
chr8	113566254	113566609	protein_coding	Aars	exon	ENSMUSG00000031960	ProperStrand	355	chr9	110544350	110544366	protein_coding	Nbeal2	exon	ENSMUSG00000056724	ProperStrand	161	1	-7.7792
chr17	28123516	28123708	protein_coding	Anks1	exon	ENSMUSG00000024219	ProperStrand	32	chr16	23110989	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.9664
chr15	89467053	89467071	LTR	MER21B	ERV1	chr15MER21B89467032	NonProperStrand	3	chr10	80641909	80642097	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	3	-inf
chr2	90235290	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	59172892	59172919	protein_coding	Pkp4	exon	ENSMUSG00000026991	ProperStrand	33	2	-9.2133
chr9	106091024	106091114	protein_coding	Wdr82	utr3	ENSMUSG00000020257	ProperStrand	34	chr11	97642976	97643056	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.4852
chr11	50678863	50678880	protein_coding	Grm6	utr3	ENSMUSG00000000617	ProperStrand	3	chr9	15117019	15117093	snoRNA	ENSMUSG00000077614_SNORA40	.	ENSMUSG00000077614	ProperStrand	54	1	-inf
chr14	63287586	63287611	protein_coding	Serpine3	intron	ENSMUSG00000091155	ProperStrand	210	chr15	34370545	34370645	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-1.4483
chr7	117772719	117772742	protein_coding	Adm	utr3	ENSMUSG00000030790	ProperStrand	1	chr8	79774797	79774814	protein_coding	Arhgap10	utr3	ENSMUSG00000037148	ProperStrand	58	1	-inf
chr10	41924948	41924966	protein_coding	Foxo3	intron	ENSMUSG00000048756	NonProperStrand	4	chr7	117189933	117190018	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-8.8371
chr11	5425087	5425177	protein_coding	Xbp1	utr3	ENSMUSG00000020484	ProperStrand	16	chr9	120039583	120039663	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	11	-inf
chr5	74489300	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr2	153493246	153493375	protein_coding	Dnmt3b	exon	ENSMUSG00000027478	ProperStrand	19	1	-7.9189
chr1	127331406	127331423	protein_coding	Actr3	intron	ENSMUSG00000026341	NonProperStrand	4	chr4	116862549	116862663	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	1	-14.5145
chr9	15119659	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	chr19	8799358	8799417	snoRNA	ENSMUSG00000065280_SNORD28	.	ENSMUSG00000065280	ProperStrand	269	4	-3.0016
chr15	79908934	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	chr11	51551274	51551335	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	1	-0.7561
chr1	155287312	155287354	snoRNA	ENSMUSG00000064435_SNORA4	.	ENSMUSG00000064435	ProperStrand	263	chr5	74489620	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-1.3058
chr9	64024965	64024989	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	chr7	148634736	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-0.6984
chr3	117489579	117489597	protein_coding	Snx7	intron	ENSMUSG00000028007	NonProperStrand	3	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-9.5778
chr18	10052133	10052153	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr6	48409604	48409621	protein_coding	Sspo	exon	ENSMUSG00000029797	ProperStrand	4	1	-14.4729
chr2	172182021	172182048	protein_coding	Aurka	utr3	ENSMUSG00000027496	ProperStrand	31	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-8.3055
chr7	36366045	36366062	protein_coding	Rgs9bp	utr3	ENSMUSG00000056043	ProperStrand	12	chr5	121655016	121655100	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-11.2462
chr3	137849424	137849440	protein_coding	4930579F01Rik	utr5	ENSMUSG00000012042	NonProperStrand	156	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-7.4620
chr16	26358868	26358884	protein_coding	Cldn1	utr3	ENSMUSG00000022512	ProperStrand	1	chr5	121655100	121655154	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-inf
chr4	43505657	43505683	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr2	83495429	83495524	protein_coding	Zc3h15	intron	ENSMUSG00000027091	ProperStrand	37	1	-3.9620
chr17	35089181	35089204	processed_transcript	1110038B12Rik	.	ENSMUSG00000092203	ProperStrand	126	chr15	82980098	82980188	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-5.6762
chr19	12067702	12067740	protein_coding	Osbp	utr3	ENSMUSG00000024687	ProperStrand	19	chr16	23111447	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.1411
chr4	123594934	123594951	protein_coding	Rragc	exon	ENSMUSG00000028646	ProperStrand	6	chr16	90386834	90386853	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	1	-16.9315
chr4	46508038	46508117	snoRNA	ENSMUSG00000064410_SNORA36	.	ENSMUSG00000064410	ProperStrand	133	chr7	148634702	148634792	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-2.5487
chr4	118805725	118805805	protein_coding	Slc2a1	exon	ENSMUSG00000028645	ProperStrand	361	chr11	6520321	6520411	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	1	-4.2148
chr7	29605727	29605751	protein_coding	Hnrnpl	exon	ENSMUSG00000015165	ProperStrand	150	chr11	58682398	58682415	protein_coding	2810021J22Rik	utr5	ENSMUSG00000020491	ProperStrand	162	1	-9.4826
chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	chr11	106362557	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	3	-8.1196
chrX	19683228	19683244	protein_coding	Slc9a7	exon	ENSMUSG00000037341	NonProperStrand	136	chr16	23111777	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-0.7792
chr14	31953025	31953118	protein_coding	Stab1	exon	ENSMUSG00000042286	NonProperStrand	127	chr7	116663711	116663746	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.3331
chr1	63225253	63225284	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	chr5	108334208	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	2	-2.0259
chr1	88247743	88247796	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	chrX	54644624	54644649	snoRNA	ENSMUSG00000065110_Snord61	.	ENSMUSG00000065110	ProperStrand	40	3	-13.6347
chr5	8427500	8428632	protein_coding	Slc25a40	exon	ENSMUSG00000054099	ProperStrand	5	chr16	23111754	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-11.1437
chr6	122661769	122661814	protein_coding	Nanog	exon	ENSMUSG00000012396	ProperStrand	66	chr7	117166808	117166858	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-4.6327
chr14	103745756	103745828	protein_coding	Mycbp2	utr5	ENSMUSG00000033004	ProperStrand	129	chr17	35087897	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-3.7431
chr7	51828028	51828044	protein_coding	Napsa	exon	ENSMUSG00000002204	ProperStrand	88	chr15	82980173	82980189	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-6.3805
chr8	98388882	98389049	protein_coding	Got2	utr3	ENSMUSG00000031672	ProperStrand	85	chr4	131908236	131908339	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-1.9037
chr14	54887985	54888085	protein_coding	Abhd4	utr3	ENSMUSG00000040997	ProperStrand	21	chr5	130300531	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.4412
chr8	54605587	54605604	protein_coding	Aga	exon	ENSMUSG00000031521	ProperStrand	7	chr4	131908236	131908281	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-5.3201
chr10	6450631	6450649	protein_coding	Plekhg1	intron	ENSMUSG00000040624	NonProperStrand	75	chr5	116011370	116011393	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	1	-9.7005
chr1	162965530	162965598	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr18	33954817	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	51	-1.9137
mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr3	132973281	132973299	protein_coding	Ppa2	intron	ENSMUSG00000028013	NonProperStrand	1	1	-inf
chr10	127521233	127521270	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	chr5	108336363	108336458	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-1.0453
chr3	84506425	84506460	protein_coding	Tmem154	utr3	ENSMUSG00000056498	ProperStrand	2	chr10	90581072	90581162	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-12.1998
chr17	45885962	45885989	lincRNA	Gm16862	intron	ENSMUSG00000086615	ProperStrand	9	chr9	120037953	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-8.5211
chr2	35949550	35949567	protein_coding	Lhx6	intron	ENSMUSG00000026890	NonProperStrand	17	chr5	130300457	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-11.6855
chr1	24619361	24619380	protein_coding	Gm10222	exon	ENSMUSG00000067736	ProperStrand	42	chr2	158185530	158185663	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	4	-24.0032
chr11	62590591	62590631	snoRNA	ENSMUSG00000064692_SNORA67	.	ENSMUSG00000064692	ProperStrand	185	chr11	69481335	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	23	-19.8897
chr18	78313257	78316891	protein_coding	Slc14a1	utr5	ENSMUSG00000059336	ProperStrand	7	chr7	52378449	52378481	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	1	-12.9263
chr2	73705998	73706088	protein_coding	Atf2	intron	ENSMUSG00000027104	ProperStrand	37	chr9	59526784	59526864	protein_coding	Pkm2	utr3	ENSMUSG00000032294	NonProperStrand	18	1	-16.7190
chr16	20280051	20280138	protein_coding	Parl	exon	ENSMUSG00000033918	ProperStrand	19	chr17	24857725	24857815	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.3961
chr7	97324876	97324901	protein_coding	Picalm	exon	ENSMUSG00000039361	ProperStrand	23	chrX	34622906	34622996	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	4	-15.7433
chr12	71347267	71347283	protein_coding	Trim9	utr3	ENSMUSG00000021071	NonProperStrand	75	chr19	8963129	8963181	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.9113
chr10	116491164	116491936	protein_coding	Cct2	exon	ENSMUSG00000034024	ProperStrand	100	chr7	52381973	52382027	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	2	-9.3058
chr7	152123262	152123282	protein_coding	Ccnd1	exon	ENSMUSG00000070348	NonProperStrand	1	chr16	23110874	23110939	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr2	144087425	144087470	protein_coding	Snx5	intron	ENSMUSG00000027423	ProperStrand	64	chr4	131908356	131908432	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.3270
chr9	66255883	66255899	protein_coding	Herc1	exon	ENSMUSG00000038664	NonProperStrand	35	chr1	59761674	59761715	snoRNA	ENSMUSG00000089093_Snord11	.	ENSMUSG00000089093	ProperStrand	193	1	-12.0583
chr9	40612400	40612435	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr5	130719475	130719516	protein_coding	0610007L01Rik	utr3	ENSMUSG00000053094	ProperStrand	39	1	-9.0040
chr13	21988791	21988832	miRNA	Mir1983	.	ENSMUSG00000088148	ProperStrand	23	chr11	6428088	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.0081
chr16	29652015	29652115	protein_coding	Opa1	utr3	ENSMUSG00000038084	ProperStrand	33	chr10	23505152	23505215	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.1417
chr9	44215538	44215555	protein_coding	Trappc4	utr5	ENSMUSG00000032112	NonProperStrand	1	chr7	116663696	116663759	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-inf
chr13	55452536	55452560	protein_coding	Lman2	exon	ENSMUSG00000021484	ProperStrand	26	chr16	5100103	5100119	protein_coding	Ppl	exon	ENSMUSG00000039457	ProperStrand	37	1	-15.9630
chr13	102540098	102540121	LTR	MTE2a	MaLR	chr13MTE2a102539977	ProperStrand	1	chr18	35714186	35714291	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-inf
chr9	120039585	120039675	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	chr9	15130900	15130982	snoRNA	ENSMUSG00000077394_snoU2_19	.	ENSMUSG00000077394	ProperStrand	96	1	-2.4880
chr6	122679327	122679417	protein_coding	Slc2a3	utr3	ENSMUSG00000003153	ProperStrand	682	chr9	15119305	15119385	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-0.9780
chr18	35716800	35716880	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	NonProperStrand	45	chr5	74489575	74489665	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	NonProperStrand	5	2	-19.8612
chr8	24042846	24042864	protein_coding	Myst3	exon	ENSMUSG00000031540	ProperStrand	111	chr17	35089181	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	2	-7.1728
chr2	164250066	164251730	protein_coding	Sdc4	utr3	ENSMUSG00000017009	ProperStrand	177	chr4	56910496	56910593	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	4	-12.9837
chr3	104459524	104459557	protein_coding	Slc16a1	exon	ENSMUSG00000032902	ProperStrand	48	chr6	71832605	71832687	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	2	-9.8412
chr4	83115798	83115891	protein_coding	Psip1	intron	ENSMUSG00000028484	NonProperStrand	2	chr16	23110526	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-9.6327
chr1	55141389	55141479	protein_coding	Hspd1	exon	ENSMUSG00000025980	ProperStrand	140	chr7	150717335	150717415	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	14	-19.4233
chr2	90235296	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	53873594	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	2	-1.8532
chr10	79188942	79189044	protein_coding	Hcn2	exon	ENSMUSG00000020331	ProperStrand	17	chr1	162965555	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-9.3718
chr1	87745946	87745970	protein_coding	Cab39	utr3	ENSMUSG00000036707	ProperStrand	45	chr11	69481333	69481423	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-6.3209
chr5	74489214	74489287	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr7	30026273	30026289	protein_coding	Yif1b	intron	ENSMUSG00000030588	ProperStrand	154	1	-3.8173
chr16	87486141	87491643	protein_coding	Cct8	exon	ENSMUSG00000025613	ProperStrand	65	chr11	77996557	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	4	-17.8042
chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	chr9	40612895	40612921	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	1	-6.1330
chr5	100855902	100855974	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	2	-4.3808
chr9	110869080	110872532	protein_coding	Lrrc2	exon	ENSMUSG00000032495	ProperStrand	8	chr4	131908687	131908792	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-19.1589
chr10	38837086	38837103	LTR	RMER17D2	ERVK	chr10RMER17D238836328	ProperStrand	4	chr7	133938948	133939173	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	1	-14.0124
chr8	73286795	73286875	protein_coding	Ifi30	utr3	ENSMUSG00000031838	ProperStrand	40	chr17	24857782	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.0012
chr4	132049441	132049541	protein_coding	Sesn2	utr3	ENSMUSG00000028893	ProperStrand	75	chrX	12173367	12173399	protein_coding	Atp6ap2	exon	ENSMUSG00000031007	ProperStrand	29	11	-20.5991
chr11	7067186	7069426	protein_coding	Adcy1	exon	ENSMUSG00000020431	ProperStrand	183	chr19	8799830	8799882	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-2.8727
chr1	177823041	177823057	protein_coding	Exo1	exon	ENSMUSG00000039748	ProperStrand	27	chr4	131908809	131908869	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.4692
chr15	102309171	102320190	protein_coding	Pcbp2	exon	ENSMUSG00000056851	ProperStrand	164	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-3.3795
chrX	100767009	100767025	non_coding	B230206F22Rik	.	ENSMUSG00000086370	NonProperStrand	20	chr2	25264502	25264640	protein_coding	Npdc1	exon	ENSMUSG00000015094	ProperStrand	5	1	-19.4763
chr17	35036008	35036025	protein_coding	Ehmt2	exon	ENSMUSG00000013787	NonProperStrand	5	chr19	36940558	36940611	protein_coding	Tnks2	exon	ENSMUSG00000024811	ProperStrand	133	1	-16.7970
chr19	12552768	12556644	protein_coding	Dtx4	exon	ENSMUSG00000039982	ProperStrand	4	chr7	116663649	116663729	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-7.9103
chr11	117729369	117729386	protein_coding	Tha1	utr3	ENSMUSG00000017713	NonProperStrand	56	chr10	80643010	80643075	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-6.2351
chr9	44883154	44883180	protein_coding	Mpzl3	utr3	ENSMUSG00000070305	ProperStrand	3	chr16	23111445	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-12.1275
chr17	25382177	25382264	protein_coding	Baiap3	exon	ENSMUSG00000047507	ProperStrand	6	chr7	116663633	116663708	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-7.0045
chr2	27315569	27315649	protein_coding	Brd3	intron	ENSMUSG00000026918	ProperStrand	85	chr17	34020426	34020516	protein_coding	Kifc1	exon	ENSMUSG00000079553	ProperStrand	47	1	-13.1089
chr2	158181429	158181479	lincRNA	9430008C03Rik	exon	ENSMUSG00000085385	ProperStrand	1039	chr1	4883514	4883614	protein_coding	Tcea1	exon	ENSMUSG00000033813	ProperStrand	24	1	-9.4612
chr17	24857624	24858828	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr4	131908688	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	10	-2.5532
chr11	97576615	97576705	protein_coding	Pip4k2b	utr3	ENSMUSG00000018547	ProperStrand	46	chrX	34622947	34623028	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-3.6584
chr9	113750743	113750760	protein_coding	Clasp2	exon	ENSMUSG00000033392	ProperStrand	30	chr6	71832595	71832685	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	3	-15.8914
chr7	37384310	37384327	LTR	ORR1E	MaLR	chr7ORR1E37384234	NonProperStrand	30	chr12	17552949	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-6.4541
chr2	28507719	28514145	protein_coding	Tsc1	utr5	ENSMUSG00000026812	ProperStrand	29	chr2	144416050	144416150	protein_coding	Sec23b	utr3	ENSMUSG00000027429	ProperStrand	42	3	-20.8546
chr10	120832874	120832929	protein_coding	Gns	utr3	ENSMUSG00000034707	ProperStrand	19	chr16	23110931	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7016
chr9	15119360	15119421	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	chr17	71990923	71990999	snoRNA	ENSMUSG00000092713_CT010429.1	.	ENSMUSG00000092713	ProperStrand	182	1	-3.0311
chr3	96096219	96096235	protein_coding	Fcgr1	exon	ENSMUSG00000015947	NonProperStrand	3	chr14	64498369	64498400	protein_coding	Pinx1	intron	ENSMUSG00000021958	ProperStrand	17	2	-inf
chr12	31990828	31991870	protein_coding	Lamb1	exon	ENSMUSG00000002900	ProperStrand	87	chr15	79908956	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-4.7525
chr1	179673788	179673807	protein_coding	1700016C15Rik	intron	ENSMUSG00000015962	NonProperStrand	15	chr7	116664809	116664924	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-12.3193
chr2	70527297	70528717	protein_coding	Gorasp2	exon	ENSMUSG00000014959	ProperStrand	21	chr9	61220703	61220720	protein_coding	Tle3	utr5	ENSMUSG00000032280	NonProperStrand	10	1	-19.1688
chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	chr9	15118519	15118570	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	1	-3.1829
chr2	164672120	164672262	protein_coding	Pltp	exon	ENSMUSG00000017754	ProperStrand	15	chr15	34370545	34370587	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-6.2440
chr13	73778963	73779006	protein_coding	Tert	intron	ENSMUSG00000021611	ProperStrand	7	chr1	87983916	87983997	snoRNA	ENSMUSG00000077274_SNORA26	.	ENSMUSG00000077274	ProperStrand	361	3	-inf
chr5	130063280	130063331	protein_coding	Sfswap	intron	ENSMUSG00000029439	ProperStrand	34	chr17	24857716	24857773	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.2959
chr12	77462392	77462430	protein_coding	Zbtb25	intron	ENSMUSG00000056459	ProperStrand	3	chr4	131866155	131866245	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-9.8903
chr2	75501666	75501738	protein_coding	Hnrnpa3	exon	ENSMUSG00000059005	ProperStrand	289	chr19	8800453	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-1.0041
chr16	57391687	57391777	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr19	8799024	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	NonProperStrand	4	2	-20.6271
chr9	69972993	69973998	protein_coding	Fam81a	exon	ENSMUSG00000032224	ProperStrand	59	chr10	43302477	43302525	protein_coding	Cd24a	exon	ENSMUSG00000047139	ProperStrand	4	1	-18.5804
chr7	105300350	105300367	protein_coding	Capn5	exon	ENSMUSG00000035547	ProperStrand	99	chr1	162965986	162966041	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-2.7028
chr2	166767419	166767500	protein_coding	Cse1l	intron	ENSMUSG00000002718	NonProperStrand	5	chr16	23111451	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	5	-inf
chr5	88279490	88279506	protein_coding	Gm7337	utr5	ENSMUSG00000067156	ProperStrand	1	chr12	106269354	106269444	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-inf
chr14	27919427	27919527	protein_coding	Il17rd	utr3	ENSMUSG00000040717	ProperStrand	24	chr1	88247743	88247806	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-6.9092
chr4	111289776	111289792	protein_coding	Agbl4	exon	ENSMUSG00000061298	NonProperStrand	33	chr3	95980284	95980410	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	3	-17.8314
chr9	20918701	20918717	protein_coding	Tyk2	exon	ENSMUSG00000032175	ProperStrand	29	chr1	162966813	162966845	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-7.7094
chr4	111926700	111928231	protein_coding	Skint3	exon	ENSMUSG00000070868	ProperStrand	13	chr9	120037915	120037971	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-7.7542
chr11	82757124	82757141	antisense	1700003F17Rik	.	ENSMUSG00000086327	NonProperStrand	12	chr11	6428077	6428154	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-6.3129
chr3	52388277	52388294	SINE	B4A	B4	chr3B4A52388218	ProperStrand	169	chr17	35087963	35088062	processed_transcript	1110038B12Rik	.	ENSMUSG00000092203	ProperStrand	126	2	-15.3848
chr8	73051744	73051761	protein_coding	Fkbp8	utr5	ENSMUSG00000019428	ProperStrand	52	chr4	116827119	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-7.3253
chr17	95160908	95218242	protein_coding	2610044O15Rik	exon	ENSMUSG00000066057	NonProperStrand	70	chr11	97642952	97642978	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.2124
chr6	122663243	122663506	protein_coding	Nanog	exon	ENSMUSG00000012396	ProperStrand	66	chr7	116663634	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	4	-8.6221
chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	chr7	117189876	117189943	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-0.8220
chr2	158182155	158182280	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	chr9	15130707	15130779	snoRNA	ENSMUSG00000077506_Scarna9	.	ENSMUSG00000077506	ProperStrand	148	5	-14.1530
chr8	24290606	24290664	protein_coding	Agpat6	exon	ENSMUSG00000031545	ProperStrand	11	chr8	13876097	13876187	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-10.5930
chr9	108397390	108397470	protein_coding	Usp19	exon	ENSMUSG00000006676	ProperStrand	57	chr9	15119307	15119397	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-5.2084
chr9	118484192	118484281	protein_coding	Golga4	intron	ENSMUSG00000038708	ProperStrand	95	chr15	98350146	98350191	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-3.8881
chr11	78085394	78085494	protein_coding	2610507B11Rik	exon	ENSMUSG00000010277	ProperStrand	246	chr7	134617370	134617405	protein_coding	Prr14	exon	ENSMUSG00000030822	ProperStrand	6	2	-19.7087
chr12	50485931	50485947	protein_coding	Foxg1	exon	ENSMUSG00000020950	NonProperStrand	26	chr4	94610080	94610168	protein_coding	Mysm1	utr3	ENSMUSG00000062627	ProperStrand	20	1	-17.1374
chr17	24857641	24857978	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-0.7454
chr12	104317206	104317223	protein_coding	Unc79	exon	ENSMUSG00000021198	ProperStrand	99	chr19	8963090	8963183	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.4882
chrX	165695583	165695599	protein_coding	Arhgap6	exon	ENSMUSG00000031355	ProperStrand	74	chr3	86890490	86892092	protein_coding	Kirrel	exon	ENSMUSG00000041734	NonProperStrand	8	1	-16.9853
chr13	42900703	42900723	protein_coding	Phactr1	intron	ENSMUSG00000054728	NonProperStrand	10	chr1	39605606	39605696	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-10.9958
chr4	82022904	82022995	protein_coding	Nfib	intron	ENSMUSG00000008575	ProperStrand	50	chrX	131227815	131227864	protein_coding	Armcx4	exon	ENSMUSG00000049804	ProperStrand	15	1	-16.5093
chr5	121655052	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	chr8	113366285	113366340	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	2	-1.2523
chr12	8799091	8799165	protein_coding	Sdc1	utr3	ENSMUSG00000020592	ProperStrand	15	chr4	131908689	131908771	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.5353
chr19	46884879	46884895	protein_coding	Cnnm2	intron	ENSMUSG00000064105	ProperStrand	18	chr11	106362301	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-8.2541
chr9	65909311	65909327	protein_coding	Ppib	exon	ENSMUSG00000032383	ProperStrand	31	chr11	6428077	6428157	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.4276
chr9	56958470	56958570	protein_coding	Sin3a	exon	ENSMUSG00000042557	ProperStrand	108	chr10	80641693	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	8	-inf
chr3	104459457	104459547	protein_coding	Slc16a1	exon	ENSMUSG00000032902	ProperStrand	48	chr16	23110913	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-2.0114
chr13	8766290	8766308	protein_coding	Adarb2	utr3	ENSMUSG00000052551	ProperStrand	292	chr19	8963026	8963174	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-0.7076
chrX	84483697	84483742	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr14	76247716	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	3	-1.5410
chr4	82114659	82114675	protein_coding	Nfib	intron	ENSMUSG00000008575	ProperStrand	50	chr11	62416600	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-5.5221
chr4	137813144	137813162	protein_coding	Sh2d5	exon	ENSMUSG00000045349	NonProperStrand	31	chr4	131908809	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.2342
chr10	40599918	40599934	protein_coding	Cdc40	intron	ENSMUSG00000038446	ProperStrand	34	chr17	39985667	39985766	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-7.0595
chr19	44188368	44188459	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr7	149170854	149171340	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	1	-5.7599
chrX	83547356	83547372	protein_coding	Mageb4	intron	ENSMUSG00000035427	NonProperStrand	191	chr10	23505143	23505204	protein_coding	Rps12	intron	ENSMUSG00000061983	ProperStrand	309	1	-7.7151
chr6	134029351	134029368	protein_coding	Etv6	intron	ENSMUSG00000030199	ProperStrand	46	chr11	76859356	76859403	protein_coding	Ccdc55	exon	ENSMUSG00000037958	ProperStrand	4	1	-19.9762
chr2	98940408	98940498	LINE	Lx	L1	chr2Lx98940416	NonProperStrand	1	chr2	98940686	98940766	LINE	Lx	L1	chr2Lx98940655	NonProperStrand	1	1	-inf
chr15	95050371	95050387	protein_coding	Nell2	utr3	ENSMUSG00000022454	ProperStrand	64	chr18	35714157	35714262	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-3.3248
chr7	54024460	54024676	protein_coding	Hps5	exon	ENSMUSG00000014418	NonProperStrand	1	chr3	68889170	68889224	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-inf
chr13	90254426	90254459	protein_coding	Tmem167	intron	ENSMUSG00000012422	NonProperStrand	2	chr11	69483136	69483202	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-9.6187
chr12	101539245	101539263	protein_coding	Ttc7b	utr3	ENSMUSG00000033530	NonProperStrand	15	chr2	130101984	130102056	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-8.1310
chr7	36388906	36389233	protein_coding	Ankrd27	exon	ENSMUSG00000034867	ProperStrand	132	chr19	46728611	46728627	protein_coding	D19Wsu162e	exon	ENSMUSG00000047731	NonProperStrand	12	1	-15.0139
chr1	137345619	137346480	protein_coding	Nav1	exon	ENSMUSG00000009418	NonProperStrand	60	chr2	130101987	130102056	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-5.3566
chr2	26493434	26493524	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr9	64022855	64022881	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-1.4383
chr3	24029355	24029372	LTR	ORR1A4	MaLR	chr3ORR1A424029193	NonProperStrand	1	chr16	23110966	23110992	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr18	67454242	67454294	protein_coding	Impa2	intron	ENSMUSG00000024525	ProperStrand	31	chr9	120038589	120038610	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.2656
chr2	152144059	152144159	protein_coding	Rbck1	exon	ENSMUSG00000027466	ProperStrand	30	chr10	23505217	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	8	-inf
chr11	60001911	60001927	protein_coding	Rai1	exon	ENSMUSG00000062115	NonProperStrand	81	chr7	116663633	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	7	-15.0891
chr11	85651938	85651954	protein_coding	Tbx2	exon	ENSMUSG00000000093	NonProperStrand	14	chr16	4886395	4886411	protein_coding	Mgrn1	exon	ENSMUSG00000022517	NonProperStrand	157	1	-14.3571
chr13	75905619	75905650	protein_coding	Ell2	intron	ENSMUSG00000001542	ProperStrand	110	chr11	80080114	80080131	protein_coding	Rhot1	utr3	ENSMUSG00000017686	NonProperStrand	48	1	-12.5466
chr7	134705294	134706646	protein_coding	Srcap	utr3	ENSMUSG00000090663	ProperStrand	28	chr11	62418039	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-7.0687
chr14	31415964	31417315	protein_coding	Prkcd	exon	ENSMUSG00000021948	ProperStrand	9	chr16	23111759	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	6	-19.2626
mmu-miR-182-5p	0	25	miRNA	mmu-miR-182-5p	.	mmu-miR-182-5p	ProperStrand	1	chr8	122625132	122625151	protein_coding	Gm20388	intron	ENSMUSG00000092329	ProperStrand	295	1	-inf
chr10	80492312	80492412	protein_coding	Slc39a3	utr3	ENSMUSG00000046822	ProperStrand	6	chr19	8799610	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-11.5077
chr10	68578219	68578237	LTR	MT2A	ERVL	chr10MT2A68577899	ProperStrand	21	chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	1	-11.3998
chr8	112248031	112248131	protein_coding	Zfp821	exon	ENSMUSG00000031728	ProperStrand	5	chr7	29136587	29136655	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-7.2327
chr9	106760166	106760228	protein_coding	Vprbp	exon	ENSMUSG00000040325	ProperStrand	35	chr11	62416977	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-7.1137
chr6	6508404	6510410	protein_coding	Shfm1	utr3	ENSMUSG00000042541	ProperStrand	8	chr4	131908274	131908354	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-5.0428
chr3	41385144	41392868	protein_coding	Phf17	exon	ENSMUSG00000025764	ProperStrand	101	chr5	92934257	92934290	protein_coding	Scarb2	exon	ENSMUSG00000029426	ProperStrand	30	1	-13.6742
chr14	64112462	64112509	protein_coding	Tdh	intron	ENSMUSG00000021953	ProperStrand	67	chr3	89750435	89750451	protein_coding	Atp8b2	exon	ENSMUSG00000060671	ProperStrand	140	1	-11.3904
chr12	110881083	110881114	lincRNA	Rian	intron	ENSMUSG00000091793	ProperStrand	612	chr4	129192401	129192501	protein_coding	Marcksl1	utr3	ENSMUSG00000047945	ProperStrand	52	1	-8.9535
chr4	133574127	133574143	protein_coding	Lin28a	exon	ENSMUSG00000050966	ProperStrand	55	chr4	131908396	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.5458
chr7	129147483	129150788	protein_coding	Gga2	exon	ENSMUSG00000030872	ProperStrand	65	chr11	62416622	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-5.0111
chr5	23671389	23671407	protein_coding	Nupl2	intron	ENSMUSG00000048439	ProperStrand	4	chr1	88247823	88247876	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-10.7122
chr15	99304703	99304719	protein_coding	Bcdin3d	intron	ENSMUSG00000037525	ProperStrand	4	chr5	108334206	108334266	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-10.4241
chr16	89929002	89929092	protein_coding	Tiam1	intron	ENSMUSG00000002489	ProperStrand	80	chr14	33005151	33005232	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-3.4591
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr2	32818889	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-2.7596
chr2	118611946	118611962	protein_coding	Disp2	exon	ENSMUSG00000040035	NonProperStrand	204	chr7	133909146	133909201	protein_coding	Mapk3	utr3	ENSMUSG00000063065	ProperStrand	9	1	-14.7543
chr15	99451541	99451631	protein_coding	Racgap1	utr3	ENSMUSG00000023015	ProperStrand	47	chr5	108334237	108334317	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-5.2939
chr15	85706040	85706140	protein_coding	Gtse1	exon	ENSMUSG00000022385	ProperStrand	74	chr9	64023310	64023329	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	2	-12.8077
chr13	52738487	52741157	protein_coding	Syk	exon	ENSMUSG00000021457	ProperStrand	20	chr18	35102298	35102342	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-8.7979
chr18	75553612	75553639	protein_coding	Smad7	exon	ENSMUSG00000025880	ProperStrand	83	chr7	52382236	52382288	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	3	-16.8997
chr14	62002083	62002115	protein_coding	Kpna3	exon	ENSMUSG00000021929	ProperStrand	14	chr8	74662513	74662582	protein_coding	Tpm4	exon	ENSMUSG00000031799	ProperStrand	11	2	-inf
chr2	25294883	25294904	protein_coding	Abca2	exon	ENSMUSG00000026944	ProperStrand	57	chr2	113931541	113931659	protein_coding	Aqr	exon	ENSMUSG00000040383	ProperStrand	70	1	-13.1064
chr8	109560875	109560924	protein_coding	Vps4a	intron	ENSMUSG00000031913	ProperStrand	10	chr1	43132316	43132332	protein_coding	Tgfbrap1	exon	ENSMUSG00000070939	ProperStrand	29	1	-19.3025
chr9	64034180	64034203	protein_coding	Map2k1	utr3	ENSMUSG00000004936	ProperStrand	36	chr16	23111381	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-7.8267
chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	chr11	68886939	68887036	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-1.5323
chr9	85220675	85220691	protein_coding	Fam46a	utr5	ENSMUSG00000032265	NonProperStrand	21	chr7	29136537	29136629	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.2792
chr4	20548793	20548811	protein_coding	Nkain3	intron	ENSMUSG00000055761	ProperStrand	34	chr17	24857717	24857752	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.2959
chr11	53430821	53430840	protein_coding	Il4	utr5	ENSMUSG00000000869	NonProperStrand	11	chr3	96528187	96528291	snoRNA	ENSMUSG00000065669_SNORA5	.	ENSMUSG00000065669	ProperStrand	180	7	-inf
chr11	70467870	70467914	protein_coding	Pfn1	exon	ENSMUSG00000018293	ProperStrand	55	chr4	110014036	110014053	protein_coding	Elavl4	intron	ENSMUSG00000028546	ProperStrand	8	1	-17.3253
chr19	8963032	8963048	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	chr14	31827501	31827543	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-3.8937
chr10	80131311	80131363	protein_coding	Mknk2	exon	ENSMUSG00000020190	ProperStrand	18	chr13	62944660	62944677	protein_coding	Fbp2	intron	ENSMUSG00000021456	ProperStrand	100	1	-14.7356
chr14	27815474	27815490	protein_coding	Hesx1	utr3	ENSMUSG00000040726	ProperStrand	17	chr6	72388906	72388922	protein_coding	Mat2a	intron	ENSMUSG00000053907	ProperStrand	51	2	-inf
chrX	20259127	20259249	protein_coding	Uba1	exon	ENSMUSG00000001924	ProperStrand	156	chr4	131865932	131865981	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.1858
chr4	43551398	43551563	protein_coding	Tln1	exon	ENSMUSG00000028465	ProperStrand	101	chr4	131865381	131865461	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-3.0456
chr2	58208958	58208975	protein_coding	Acvr1c	intron	ENSMUSG00000026834	NonProperStrand	4	chr8	98269959	98270093	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-11.1714
chr17	81344133	81344150	protein_coding	Tmem178	exon	ENSMUSG00000024245	ProperStrand	67	chr4	131866221	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-3.4615
chr8	28385761	28385834	protein_coding	Eif4ebp1	utr3	ENSMUSG00000031490	ProperStrand	22	chr1	162965531	162965555	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.1855
chr8	73419649	73419684	protein_coding	Rpl18a	intron	ENSMUSG00000045128	ProperStrand	394	chr15	79908930	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	2	-3.6643
chr17	34747537	34747555	protein_coding	Agpat1	exon	ENSMUSG00000034254	NonProperStrand	39	chr9	90004989	90009384	protein_coding	Morf4l1	exon	ENSMUSG00000062270	ProperStrand	33	1	-15.3614
chrX	71589885	71589904	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr11	97642952	97643072	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	10	-10.3909
chr15	55183718	55183736	protein_coding	Col14a1	intron	ENSMUSG00000022371	NonProperStrand	10	chr4	129308859	129308876	protein_coding	Txlna	exon	ENSMUSG00000053841	ProperStrand	37	1	-17.7383
chr6	148869720	148869764	protein_coding	Fam60a	utr3	ENSMUSG00000039985	ProperStrand	68	chr11	97642987	97643077	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.2606
chr11	60370927	60370943	protein_coding	Alkbh5	utr3	ENSMUSG00000042650	ProperStrand	203	chr5	130772581	130772629	protein_coding	Tyw1	exon	ENSMUSG00000056310	ProperStrand	32	1	-12.1385
chr7	52974910	52974945	protein_coding	Rpl18	exon	ENSMUSG00000059070	ProperStrand	116	chr11	97642952	97643061	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.4282
chr8	83290185	83290217	protein_coding	Gab1	utr3	ENSMUSG00000031714	ProperStrand	72	chr1	162965555	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.9484
chr5	76983872	76983972	protein_coding	Exoc1	intron	ENSMUSG00000036435	ProperStrand	12	chr9	15118342	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-6.6107
chr2	180423532	180423622	protein_coding	Dido1	exon	ENSMUSG00000038914	ProperStrand	81	chr16	23111376	23111456	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.8748
chr1	71687853	71688555	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr11	62418039	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-0.8824
chr8	106942360	106942376	protein_coding	Dync1li2	utr3	ENSMUSG00000035770	ProperStrand	75	chr8	73419731	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.7342
chr15	76080233	76080298	protein_coding	Grina	utr3	ENSMUSG00000022564	ProperStrand	18	chr4	131865908	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.8813
chr12	85001274	85001569	protein_coding	Rbm25	exon	ENSMUSG00000010608	ProperStrand	42	chr17	35299507	35299550	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	2	-8.9709
chr18	14799603	14799716	protein_coding	Ss18	intron	ENSMUSG00000037013	ProperStrand	24	chr16	23110982	23111452	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-4.1579
chr10	23506290	23506349	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	chr5	74489585	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	5	-0.7025
chr7	133726521	133726538	protein_coding	Cln3	exon	ENSMUSG00000030720	ProperStrand	87	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	2	-13.0405
chr3	116252591	116252640	protein_coding	Dbt	utr3	ENSMUSG00000000340	ProperStrand	6	chr16	23110916	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-6.6757
chr2	166889036	166889056	snoRNA	ENSMUSG00000077515_SNORD12	.	ENSMUSG00000077515	ProperStrand	191	chr15	79908956	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-3.2816
chrX	91434609	91449446	protein_coding	Eif2s3x	utr3	ENSMUSG00000035150	ProperStrand	55	chr16	23110852	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-3.6927
chr3	122606167	122606267	lincRNA	4933405D12Rik	intron	ENSMUSG00000086397	ProperStrand	2	chr2	91436228	91436270	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-14.9566
chr4	147454343	147454390	protein_coding	Agtrap	utr3	ENSMUSG00000029007	ProperStrand	18	chr19	8799855	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-7.3371
chr13	24844098	24845315	protein_coding	Gmnn	exon	ENSMUSG00000006715	ProperStrand	7	chr4	131908689	131908750	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.0493
chr18	74137512	74137530	protein_coding	Mapk4	intron	ENSMUSG00000024558	ProperStrand	34	chr4	131908689	131908791	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-5.7542
chr11	6428034	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr17	24857714	24857853	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	114	-4.2861
chr5	150026737	150026778	protein_coding	Uspl1	exon	ENSMUSG00000041264	ProperStrand	20	chr18	35714144	35714254	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-5.5524
chr13	108533624	108533724	protein_coding	Zswim6	exon	ENSMUSG00000032846	ProperStrand	23	chr4	116827119	116827179	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-8.9681
chr9	14349955	14350045	protein_coding	Amotl1	utr3	ENSMUSG00000013076	ProperStrand	72	chr1	63225578	63225658	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-6.3075
chr19	24552582	24552600	protein_coding	Pip5k1b	intron	ENSMUSG00000024867	NonProperStrand	40	chr9	40612829	40612849	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	1	-10.3606
chr11	120819664	120819737	protein_coding	Slc16a3	utr3	ENSMUSG00000025161	ProperStrand	98	chr1	88247743	88247763	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-4.1574
chr18	25582367	25582457	protein_coding	AW554918	intron	ENSMUSG00000033632	ProperStrand	23	chr2	103880871	103880951	snoRNA	ENSMUSG00000087739_SCARNA21	.	ENSMUSG00000087739	ProperStrand	50	1	-15.5956
chr5	136229760	136229778	protein_coding	Styxl1	exon	ENSMUSG00000019178	NonProperStrand	1	chr15	103333532	103333549	protein_coding	Pde1b	utr5	ENSMUSG00000022489	ProperStrand	19	1	-inf
chr2	24825186	24827046	protein_coding	Wdr85	exon	ENSMUSG00000026975	ProperStrand	323	chr17	23955808	23955828	protein_coding	Srrm2	utr3	ENSMUSG00000039218	ProperStrand	521	2	-9.2177
chr4	42985099	42985116	protein_coding	1700022I11Rik	exon	ENSMUSG00000028451	NonProperStrand	4	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-15.0461
chr13	58522644	58522724	LINE	Lx8	L1	chr13Lx858522263	NonProperStrand	1	chr13	58522821	58522911	LTR	MTC	MaLR	chr13MTC58522834	ProperStrand	1	1	-inf
chr8	123197183	123197889	protein_coding	Cox4i1	exon	ENSMUSG00000031818	ProperStrand	31	chr7	117190020	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.5752
chr2	90235285	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	147646751	147646856	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	4	-2.4156
chr7	31895791	31899711	protein_coding	Hpn	utr5	ENSMUSG00000001249	ProperStrand	126	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-6.2688
chr10	72437414	72437431	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr13	13529879	13529934	protein_coding	Nid1	utr5	ENSMUSG00000005397	ProperStrand	112	1	-7.0727
chr6	67849946	67850026	LINE	L1_Mur2	L1	chr6L1_Mur267849406	ProperStrand	1	chr6	67850197	67850287	LINE	Lx3C	L1	chr6Lx3C67850052	ProperStrand	1	1	-inf
chr13	53285957	53285977	protein_coding	Ror2	intron	ENSMUSG00000021464	ProperStrand	46	chr4	131908689	131908735	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.6050
chr1	159816638	159816655	LTR	MLT1H2	MaLR	chr1MLT1H2159816576	ProperStrand	14	chr11	119717692	119718638	protein_coding	Rptor	exon	ENSMUSG00000025583	ProperStrand	76	1	-15.8167
chr2	143780769	143780910	protein_coding	Rrbp1	exon	ENSMUSG00000027422	ProperStrand	76	chr16	35932620	35932636	protein_coding	Dtx3l	exon	ENSMUSG00000049502	ProperStrand	152	1	-10.9723
chr17	35972917	35975029	protein_coding	Tubb5	exon	ENSMUSG00000001525	ProperStrand	624	chr2	26494722	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	9	-5.7596
chr2	121053798	121097098	protein_coding	Trp53bp1	intron	ENSMUSG00000043909	ProperStrand	45	chr7	117189932	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-6.5281
chr4	43505655	43505720	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	NonProperStrand	174	chr17	13112450	13112528	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	NonProperStrand	11	1	-14.6413
chr1	9536244	9536307	protein_coding	Rrs1	exon	ENSMUSG00000061024	ProperStrand	18	chr11	62590605	62590630	snoRNA	ENSMUSG00000064692_SNORA67	.	ENSMUSG00000064692	ProperStrand	185	1	-13.4973
chr14	46082420	46082437	protein_coding	Fermt2	intron	ENSMUSG00000037712	NonProperStrand	5	chr18	33954867	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-8.5187
chr5	144934789	144934809	protein_coding	Lmtk2	exon	ENSMUSG00000038970	ProperStrand	60	chr5	89383967	89457318	protein_coding	Slc4a4	exon	ENSMUSG00000060961	NonProperStrand	195	1	-10.9491
chr14	47429087	47429177	protein_coding	Gmfb	utr3	ENSMUSG00000062014	ProperStrand	5	chr11	69481377	69481457	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-8.1843
chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	chr17	35089182	35089235	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-1.0504
chr8	109574190	109576182	protein_coding	Cog8	exon	ENSMUSG00000031916	ProperStrand	7	chrX	34622917	34622997	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-7.4170
chr3	108188279	108189225	protein_coding	Psrc1	exon	ENSMUSG00000068744	ProperStrand	38	chr9	120039546	120039636	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	3	-10.1404
chr2	118528731	118528747	protein_coding	Gm1337	exon	ENSMUSG00000078137	NonProperStrand	4	chr7	29136525	29136571	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-7.7378
chr9	30235085	30235101	protein_coding	Snx19	exon	ENSMUSG00000031993	ProperStrand	353	chr1	162965531	162965588	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-1.3146
chr9	108111232	108111325	protein_coding	Dag1	exon	ENSMUSG00000039952	ProperStrand	54	chr19	8799858	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	5	-19.3420
chr7	87236391	87236423	protein_coding	Zfp710	utr3	ENSMUSG00000048897	ProperStrand	229	chr1	89673624	89673717	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	2	-2.1667
chr7	104838225	104838242	lincRNA	Gm15623	intron	ENSMUSG00000086993	ProperStrand	5	chr18	35716762	35716886	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-6.9999
chr2	103606689	103606714	protein_coding	Caprin1	utr3	ENSMUSG00000027184	ProperStrand	145	chr19	8963082	8963173	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	13	-inf
chr1	139976731	139976747	protein_coding	Ptprc	exon	ENSMUSG00000026395	ProperStrand	27	chr7	116664871	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-4.0017
chr9	108846912	108850606	protein_coding	Uqcrc1	exon	ENSMUSG00000025651	ProperStrand	43	chr10	23505152	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-6.9076
chr9	14589331	14589349	protein_coding	Mre11a	intron	ENSMUSG00000031928	NonProperStrand	2	chr15	98350146	98350235	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-12.1511
chr11	98111577	98111677	protein_coding	Cdk12	exon	ENSMUSG00000003119	ProperStrand	50	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-4.1222
chr2	51965519	51965552	protein_coding	Rif1	exon	ENSMUSG00000036202	ProperStrand	201	chr14	31827477	31827545	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	3	-10.9042
chr19	45857807	45857855	protein_coding	Mgea5	utr5	ENSMUSG00000025220	ProperStrand	53	chr1	162967489	162967555	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-3.7039
chr6	113546933	113546950	protein_coding	4931417G12Rik	utr3	ENSMUSG00000033963	ProperStrand	16	chr1	162965531	162965584	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.8202
chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	chr1	93263066	93263082	protein_coding	Fam132b	exon	ENSMUSG00000047443	NonProperStrand	98	1	-8.2274
chr8	108771032	108771100	protein_coding	Prmt7	exon	ENSMUSG00000060098	ProperStrand	43	chr16	23111777	23111822	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.4531
chr4	138748870	138748941	protein_coding	Capzb	utr5	ENSMUSG00000028745	ProperStrand	44	chr3	88497944	88497980	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	2	-12.9030
chr11	69266813	69266829	protein_coding	Dnahc2	exon	ENSMUSG00000005237	ProperStrand	95	chr17	29109540	29109556	protein_coding	Stk38	exon	ENSMUSG00000024006	ProperStrand	57	1	-12.4932
chr2	179928170	179960509	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr2	26768049	26768119	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	5	-18.6015
chr15	103073406	103073471	protein_coding	Hnrnpa1	exon	ENSMUSG00000046434	ProperStrand	68	chr7	116664823	116664868	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.3360
chr1	93342189	93345290	protein_coding	Per2	exon	ENSMUSG00000055866	ProperStrand	114	chr1	89673591	89673628	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-2.1496
chr1	145456618	145462499	protein_coding	Cdc73	exon	ENSMUSG00000026361	ProperStrand	22	chr2	26494723	26494803	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.0039
chr17	17336400	17336480	LTR	RMER10A	ERVL	chr17RMER10A17336335	ProperStrand	1	chr17	17276756	17276846	protein_coding	Zfp97	intron	ENSMUSG00000073452	ProperStrand	1	1	-inf
chr5	69954236	69954292	protein_coding	Guf1	intron	ENSMUSG00000029208	ProperStrand	12	chr16	23111429	23111505	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.0123
chr16	17325209	17325299	protein_coding	Pi4ka	exon	ENSMUSG00000041720	ProperStrand	39	chr16	23111389	23111469	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-7.4468
chr6	92104375	92104391	protein_coding	Nr2c2	exon	ENSMUSG00000005893	ProperStrand	101	chr15	54676048	54676066	protein_coding	Enpp2	exon	ENSMUSG00000022425	ProperStrand	31	1	-13.6033
chr13	51743578	51743661	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	chr8	32260335	32260423	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	4	-1.1326
chr1	145506238	145506255	protein_coding	Cdc73	intron	ENSMUSG00000026361	NonProperStrand	26	chr7	116664805	116664908	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-4.0736
chr15	90059141	90059231	protein_coding	Alg10b	utr3	ENSMUSG00000075470	ProperStrand	15	chr4	131908267	131908347	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.7937
chr10	12341172	12353751	protein_coding	Utrn	exon	ENSMUSG00000019820	ProperStrand	69	chr11	6374930	6374946	protein_coding	Purb	exon	ENSMUSG00000091207	ProperStrand	16	1	-15.7324
chrX	20290267	20290455	protein_coding	Usp11	exon	ENSMUSG00000031066	ProperStrand	29	chr1	59541038	59541106	protein_coding	Fzd7	exon	ENSMUSG00000041075	ProperStrand	373	1	-11.1216
chr7	29599007	29599107	protein_coding	Hnrnpl	exon	ENSMUSG00000015165	ProperStrand	150	chr9	15118519	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	15	-inf
chr1	103715219	103715236	SINE	B3A	B2	chr1B3A103715223	ProperStrand	1	chr12	85350481	85350499	protein_coding	Acot1	utr5	ENSMUSG00000072949	ProperStrand	72	1	-inf
chr2	59638177	59638194	protein_coding	Tanc1	exon	ENSMUSG00000035168	ProperStrand	80	chr1	174414451	174414508	protein_coding	Igsf9	utr5	ENSMUSG00000037995	ProperStrand	13	1	-15.8614
chr10	63070812	63070829	protein_coding	Ctnna3	intron	ENSMUSG00000060843	ProperStrand	66	chr10	110918592	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-3.2747
chr12	62744414	62744433	protein_coding	Lrfn5	intron	ENSMUSG00000035653	NonProperStrand	3	chr11	106362640	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-13.7636
chr16	91270626	91270643	protein_coding	Olig1	exon	ENSMUSG00000046160	NonProperStrand	32	chr16	23110828	23110960	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.9664
chr5	122758299	122763655	protein_coding	Pptc7	exon	ENSMUSG00000038582	ProperStrand	9	chr3	68889027	68889069	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-6.9792
chr19	60656713	60656782	protein_coding	2700078E11Rik	utr5	ENSMUSG00000033417	ProperStrand	12	chr7	148634714	148634804	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-7.1654
chr1	74370622	74370712	protein_coding	Pnkd	intron	ENSMUSG00000026179	NonProperStrand	5	chr15	26568873	26568953	protein_coding	Fbxl7	intron	ENSMUSG00000043556	ProperStrand	8	1	-18.7911
chr13	48976239	48976339	protein_coding	Fam120a	exon	ENSMUSG00000038014	ProperStrand	76	chr16	23111451	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-3.1005
chr15	82980134	82980191	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr2	158185530	158185566	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	4	-4.7043
chr10	61044710	61044794	protein_coding	Lrrc20	utr3	ENSMUSG00000037151	ProperStrand	6	chr7	148634697	148634787	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-8.6331
chr8	87366128	87366179	protein_coding	Calr	utr3	ENSMUSG00000003814	ProperStrand	232	chr10	36226991	36227012	protein_coding	Hs3st5	utr5	ENSMUSG00000044499	ProperStrand	12	1	-13.8859
chr11	120819835	120819935	protein_coding	Slc16a3	utr3	ENSMUSG00000025161	ProperStrand	98	chr1	162965560	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	6	-14.0125
chr4	40894793	40894829	protein_coding	Bag1	utr5	ENSMUSG00000028416	ProperStrand	5	chr10	86221857	86221873	protein_coding	BC030307	exon	ENSMUSG00000044937	ProperStrand	77	1	-17.8717
chr4	64785646	64850438	protein_coding	Pappa	exon	ENSMUSG00000028370	ProperStrand	65	chr12	17552949	17553071	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	9	-19.2910
chr7	52975370	52975735	protein_coding	Rpl18	exon	ENSMUSG00000059070	ProperStrand	116	chr9	120037909	120037989	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-3.4660
chr5	115169677	115169694	protein_coding	Tchp	exon	ENSMUSG00000002486	ProperStrand	19	chr9	55889955	55889981	protein_coding	Rcn2	exon	ENSMUSG00000032320	ProperStrand	11	1	-18.6852
chr5	112865459	112865476	protein_coding	Sez6l	exon	ENSMUSG00000058153	ProperStrand	81	chr5	111121066	111121181	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	2	-9.5168
chr18	10052131	10052153	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr6	71832551	71832665	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-1.5710
chr10	82456766	82456784	protein_coding	Chst11	intron	ENSMUSG00000034612	ProperStrand	170	chr2	158182209	158182291	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-3.0544
chr4	132867629	132867688	protein_coding	Wdtc1	intron	ENSMUSG00000037622	ProperStrand	81	chr19	8798738	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	4	-13.5683
chr11	101118225	101120477	protein_coding	Vps25	exon	ENSMUSG00000078656	ProperStrand	21	chr17	24857796	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-7.0829
chr2	130105338	130105354	protein_coding	Idh3b	utr3	ENSMUSG00000027406	ProperStrand	146	chr11	97642958	97643091	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-3.4728
chr11	98878373	98878454	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	chr4	41158541	41158574	snoRNA	ENSMUSG00000089308_SNORD121A	.	ENSMUSG00000089308	ProperStrand	209	1	-3.8794
chr1	44237734	44237810	protein_coding	Ercc5	exon	ENSMUSG00000026048	ProperStrand	8	chrX	103392255	103392274	protein_coding	Pgk1	exon	ENSMUSG00000062070	ProperStrand	484	1	-13.2682
chr4	87876393	87876409	protein_coding	BC057079	exon	ENSMUSG00000038368	NonProperStrand	6	chr8	18802280	18802297	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-14.1247
chr14	50294212	50294302	LINE	L1_Mus3	L1	chr14L1_Mus350293915	ProperStrand	1	chr8	44358533	44358623	SINE	RSINE1	B4	chr8RSINE144358499	ProperStrand	1	1	-inf
chr10	42298355	42298372	protein_coding	Nr2e1	intron	ENSMUSG00000019803	ProperStrand	32	chr11	77995238	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-7.4344
chr9	48241068	48241084	DNA	Cheshire	MER1_type	chr9Cheshire48240856	ProperStrand	17	chr19	8798740	8798782	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-7.3031
chr7	26481008	26481025	protein_coding	Tgfb1	intron	ENSMUSG00000002603	ProperStrand	17	chr1	180258860	180258906	protein_coding	Hnrnpu	utr3	ENSMUSG00000039630	ProperStrand	286	1	-12.7463
chr17	45705180	45707333	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr2	158185530	158185654	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	5	-5.3037
chr19	6298769	6298795	protein_coding	Ehd1	utr3	ENSMUSG00000024772	ProperStrand	30	chr6	118334348	118334380	protein_coding	Bms1	exon	ENSMUSG00000030138	ProperStrand	107	1	-13.5536
chr6	120473599	120481261	protein_coding	Cecr5	exon	ENSMUSG00000058979	ProperStrand	97	chr19	8799852	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	5	-16.4695
chr5	93615671	93615734	protein_coding	Ccni	intron	ENSMUSG00000063015	ProperStrand	43	chr16	23111695	23111785	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.4531
chr1	59542171	59542247	protein_coding	Fzd7	utr3	ENSMUSG00000041075	ProperStrand	373	chr11	116533823	116533892	snoRNA	ENSMUSG00000065640_Snord1c	.	ENSMUSG00000065640	ProperStrand	373	1	-6.0241
chr18	10627799	10627857	protein_coding	Snrpd1	exon	ENSMUSG00000002477	ProperStrand	6	chr7	16505290	16505403	protein_coding	Sepw1	exon	ENSMUSG00000041571	ProperStrand	9	3	-18.9979
chr5	46063677	46065623	protein_coding	Ncapg	exon	ENSMUSG00000015880	ProperStrand	36	chr7	116663634	116663714	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.4225
chr3	89827522	89829003	protein_coding	Ubap2l	exon	ENSMUSG00000042520	ProperStrand	88	chr1	162965999	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-2.9094
chr8	123193253	123197173	protein_coding	Cox4i1	exon	ENSMUSG00000031818	ProperStrand	31	chr9	15119650	15119764	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-6.4865
chr9	19462434	19462514	LINE	L1Md_A	L1	chr9L1Md_A19461964	NonProperStrand	28	chr10	3533796	3533886	protein_coding	Oprm1	intron	ENSMUSG00000000766	NonProperStrand	11	1	-18.2854
chr14	80262508	80262525	lincRNA	Gm6999	intron	ENSMUSG00000075495	ProperStrand	265	chr2	165881016	165881116	protein_coding	Ncoa3	exon	ENSMUSG00000027678	ProperStrand	58	1	-10.4038
chr4	130305549	130305621	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	chr18	35716802	35716879	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-1.5508
chr3	102848748	102850722	protein_coding	Csde1	exon	ENSMUSG00000068823	ProperStrand	122	chr9	15119704	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.4885
chr18	61169132	61169148	protein_coding	Slc6a7	exon	ENSMUSG00000052026	NonProperStrand	11	chr18	35716763	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-5.3336
chr5	116048820	116049108	protein_coding	Gcn1l1	exon	ENSMUSG00000041638	ProperStrand	408	chr12	16946884	16946921	snoRNA	ENSMUSG00000064620_SNORA32	.	ENSMUSG00000064620	ProperStrand	165	1	-7.4548
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr5	125889842	125889918	tRNA	tRNA702-AlaTGC	.	1191595	ProperStrand	10	1	-11.3947
chr11	16307999	16308016	protein_coding	Vstm2a	intron	ENSMUSG00000048834	NonProperStrand	13	chr3	123210935	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-4.8751
chr1	24621277	24621298	protein_coding	Gm10925	utr3	ENSMUSG00000090378	ProperStrand	320	chr12	112779147	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-1.7952
chr9	59523375	59523411	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr13	59182749	59182766	protein_coding	Ntrk2	intron	ENSMUSG00000055254	ProperStrand	22	2	-14.6190
chr15	81745190	81745238	protein_coding	Aco2	utr3	ENSMUSG00000022477	ProperStrand	237	chr5	123622050	123622066	protein_coding	Hpd	exon	ENSMUSG00000029445	ProperStrand	254	1	-7.6757
chr12	112885821	112885857	protein_coding	Mark3	exon	ENSMUSG00000007411	ProperStrand	37	chr11	98684298	98684315	protein_coding	Casc3	exon	ENSMUSG00000078676	ProperStrand	33	1	-15.4673
chr4	101054727	101054807	lincRNA	0610043K17Rik	intron	ENSMUSG00000087361	ProperStrand	2	chr1	74471767	74471857	protein_coding	Vil1	intron	ENSMUSG00000026175	NonProperStrand	2	1	-inf
chr9	78550960	78550977	protein_coding	Cd109	exon	ENSMUSG00000046186	NonProperStrand	36	chr4	131865855	131865986	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	5	-12.1782
chr3	104642897	104643762	protein_coding	Capza1	exon	ENSMUSG00000070372	ProperStrand	42	chr9	120038560	120038650	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.6915
chr5	114295409	114297468	protein_coding	Coro1c	exon	ENSMUSG00000004530	ProperStrand	44	chr16	23111387	23111467	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.7117
chr8	81457710	81457790	SINE	B4A	B4	chr8B4A81457597	NonProperStrand	1	chr8	80843064	80843154	protein_coding	Ttc29	intron	ENSMUSG00000037101	ProperStrand	22	1	-inf
chr14	37934742	37934760	protein_coding	Ghitm	utr3	ENSMUSG00000041028	NonProperStrand	11	chr7	116664794	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-5.7738
chr9	66305355	66306011	protein_coding	Herc1	exon	ENSMUSG00000038664	ProperStrand	81	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	2	-13.2579
chrX	49967185	49967202	antisense	A630012P03Rik	.	ENSMUSG00000055110	ProperStrand	10	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-9.4709
chr6	90421336	90421360	protein_coding	Klf15	intron	ENSMUSG00000030087	ProperStrand	9	chr10	23505150	23505221	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.5477
chr13	114686782	114686834	protein_coding	Arl15	intron	ENSMUSG00000042348	ProperStrand	51	chr12	106269389	106269479	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-4.4494
chr11	116535951	116535982	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr18	39499016	39499051	protein_coding	Arhgap26	intron	ENSMUSG00000036452	ProperStrand	46	2	-10.4245
chrX	50613467	50613744	protein_coding	Fam122b	exon	ENSMUSG00000036022	ProperStrand	20	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-9.1951
chr6	39355853	39355890	protein_coding	Mkrn1	exon	ENSMUSG00000029922	ProperStrand	177	chr16	23111777	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-1.1180
chr14	8727175	8728619	protein_coding	Flnb	exon	ENSMUSG00000025278	ProperStrand	124	chr19	8799845	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-3.5739
chr2	24825186	24827046	protein_coding	Wdr85	exon	ENSMUSG00000026975	ProperStrand	323	chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-4.4462
chr9	15119631	15119705	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	chr17	23687227	23687264	tRNA	tRNA994-ArgCCG	.	1618098	ProperStrand	60	1	-2.6296
chr5	149100499	149126902	protein_coding	Mtus2	utr3	ENSMUSG00000029651	ProperStrand	114	chr16	23111372	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-1.9558
chr8	40681587	40681603	protein_coding	Msr1	intron	ENSMUSG00000025044	ProperStrand	138	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-5.5616
chr1	134267653	134267670	protein_coding	Tmcc2	intron	ENSMUSG00000042066	ProperStrand	8	chr16	23111757	23111812	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.6662
chr3	52388277	52388294	SINE	B4A	B4	chr3B4A52388218	ProperStrand	169	chr2	26493424	26493464	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-1.9367
chr6	24584637	24587727	protein_coding	Wasl	exon	ENSMUSG00000029684	ProperStrand	25	chr10	80641698	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	1	-9.3103
chr3	96218539	96218619	misc_RNA	Telomerase-vert	.	ENSMUSG00000064796	ProperStrand	443	chr11	116938653	116938743	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-2.4245
chr4	122968587	122968677	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	chr9	15120952	15121038	snoRNA	ENSMUSG00000065265_SNORA32	.	ENSMUSG00000065265	ProperStrand	101	1	-5.2609
chr7	129312624	129312693	protein_coding	Plk1	exon	ENSMUSG00000030867	ProperStrand	146	chr11	97642989	97643079	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	4	-4.9855
chr6	89450201	89450218	protein_coding	Chchd6	intron	ENSMUSG00000030086	ProperStrand	20	chr16	23110875	23110940	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.6223
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr19	41348803	41348819	protein_coding	Pik3ap1	exon	ENSMUSG00000025017	NonProperStrand	26	1	-14.8397
chr17	10401231	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	chr4	79650934	79650978	pseudogene	Gm11410	.	ENSMUSG00000083219	ProperStrand	47	1	-8.6486
chr18	10070310	10070410	protein_coding	Rock1	exon	ENSMUSG00000024290	ProperStrand	21	chr9	120038000	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-6.7764
chr8	11427556	11427572	protein_coding	Col4a2	exon	ENSMUSG00000031503	ProperStrand	74	chr14	49792800	49792829	protein_coding	Naa30	exon	ENSMUSG00000036282	ProperStrand	13	1	-16.0383
chr4	3543369	3543459	protein_coding	Tgs1	utr3	ENSMUSG00000028233	ProperStrand	10	chr11	69483149	69483229	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-5.8555
chr5	115795700	115795800	protein_coding	Cox6a1	utr3	ENSMUSG00000041697	ProperStrand	38	chr17	35087926	35087951	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-6.0969
chr1	45448521	45448537	protein_coding	Col5a2	exon	ENSMUSG00000026042	ProperStrand	184	chr8	80912551	80912567	protein_coding	Ttc29	intron	ENSMUSG00000037101	NonProperStrand	6	1	-15.8248
chr6	67217206	67217242	protein_coding	Serbp1	exon	ENSMUSG00000036371	ProperStrand	261	chr11	61743397	61743415	protein_coding	Akap10	intron	ENSMUSG00000047804	ProperStrand	17	1	-12.9287
chr1	130234720	130234814	protein_coding	Mcm6	exon	ENSMUSG00000026355	ProperStrand	69	chr18	35716702	35716763	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.9428
chr8	28238896	28238996	protein_coding	Brf2	exon	ENSMUSG00000031487	ProperStrand	1	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-inf
chr7	135896408	135897673	protein_coding	Sec23ip	exon	ENSMUSG00000055319	ProperStrand	27	chr19	8798765	8798797	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	5	-20.7019
chr11	14961829	14961849	LINE	Lx	L1	chr11Lx14961726	ProperStrand	93	chr4	83104079	83105782	protein_coding	Psip1	exon	ENSMUSG00000028484	ProperStrand	104	1	-11.3280
chr2	90235314	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chrX	33607698	33607715	protein_coding	Dock11	exon	ENSMUSG00000031093	ProperStrand	42	1	-5.1514
chr15	82989309	82989344	protein_coding	Cyb5r3	exon	ENSMUSG00000018042	ProperStrand	22	chr14	20629209	20629259	protein_coding	Nid2	exon	ENSMUSG00000021806	ProperStrand	372	1	-11.6899
chr15	100358955	100358972	protein_coding	Tfcp2	exon	ENSMUSG00000009733	NonProperStrand	77	chr2	25294883	25294983	protein_coding	Abca2	exon	ENSMUSG00000026944	ProperStrand	57	1	-12.9144
chr7	17040701	17040717	protein_coding	Tmem160	exon	ENSMUSG00000019158	ProperStrand	55	chr16	23109046	23109068	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-7.4552
chr1	168529188	168529278	LINE	L1Md_F	L1	chr1L1Md_F168528820	NonProperStrand	1	chr5	45357824	45358114	protein_coding	4930431F12Rik	exon	ENSMUSG00000062496	ProperStrand	1	1	-inf
chrX	49625624	49625673	protein_coding	Gpc3	utr3	ENSMUSG00000055653	ProperStrand	43	chr4	131865855	131865886	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.3073
chr1	184061522	184061582	protein_coding	Srp9	exon	ENSMUSG00000026511	ProperStrand	5	chr2	146868620	146873380	protein_coding	Xrn2	exon	ENSMUSG00000027433	ProperStrand	48	2	-19.3091
chr17	35822057	35822257	protein_coding	Ddr1	exon	ENSMUSG00000003534	ProperStrand	129	chr11	115940847	115941029	protein_coding	Wbp2	utr3	ENSMUSG00000034341	ProperStrand	39	2	-18.6633
chr9	15118323	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	chr9	64023228	64023287	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	6	-3.2074
chr12	88778745	88778767	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	chr7	51505224	51505308	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	1	-1.7625
chr7	108382504	108392668	protein_coding	Fchsd2	exon	ENSMUSG00000030691	ProperStrand	8	chr5	108336378	108336430	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-8.9530
chr15	99610450	99610472	protein_coding	Lima1	utr3	ENSMUSG00000023022	ProperStrand	159	chr14	121674889	121675466	protein_coding	Farp1	exon	ENSMUSG00000025555	ProperStrand	18	1	-13.8004
chr14	69967182	69967199	protein_coding	Entpd4	exon	ENSMUSG00000022066	NonProperStrand	2	chrX	71203607	71203671	protein_coding	Hcfc1	exon	ENSMUSG00000031386	ProperStrand	424	1	-16.9390
chr9	118457827	118466032	protein_coding	Golga4	exon	ENSMUSG00000038708	ProperStrand	95	chr16	23110964	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-1.6294
chrX	35899956	35899972	protein_coding	Cul4b	exon	ENSMUSG00000031095	NonProperStrand	89	chr11	69483136	69483265	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.8056
chr1	120732149	120732189	protein_coding	Gli2	utr3	ENSMUSG00000048402	ProperStrand	148	chr4	131866155	131866245	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	13	-19.0396
chr16	23110991	23111010	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr2	32818844	32818944	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-1.6226
chr14	63287573	63287614	protein_coding	Serpine3	intron	ENSMUSG00000091155	ProperStrand	210	chr12	17552971	17553071	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-2.7612
chr13	53073980	53073997	protein_coding	Nfil3	intron	ENSMUSG00000056749	NonProperStrand	66	chr9	15119287	15119382	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-4.9241
chr19	42225881	42225897	protein_coding	Marveld1	utr3	ENSMUSG00000044345	NonProperStrand	112	chr18	73693170	73693187	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-4.3209
chr19	47089659	47089759	protein_coding	Ina	exon	ENSMUSG00000034336	ProperStrand	27	chr5	130300534	130300551	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.9586
chr19	40296415	40296434	LTR	ORR1D2	MaLR	chr19ORR1D240296352	NonProperStrand	1	chr9	69339501	69339539	protein_coding	Anxa2	utr3	ENSMUSG00000032231	ProperStrand	43	1	-inf
chr16	22383306	22383386	protein_coding	Etv5	utr3	ENSMUSG00000013089	ProperStrand	88	chr1	36867190	36867280	protein_coding	Tmem131	exon	ENSMUSG00000026116	ProperStrand	129	1	-11.0067
chr10	123321035	123321052	LTR	ORR1E-int	MaLR	chr10ORR1E-int123319981	ProperStrand	2	chr5	54389949	54389966	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	1	-18.0888
chr12	60168819	60168866	protein_coding	Pnn	intron	ENSMUSG00000020994	ProperStrand	42	chr8	98285323	98286906	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	3	-19.8364
chr19	56003755	56003771	protein_coding	Tcf7l2	intron	ENSMUSG00000024985	ProperStrand	103	chr12	60141340	60141406	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-5.7641
chr11	69767134	69767165	Simple_repeat	(TG)n	Simple_repeat	chr11(TG)n69767122	NonProperStrand	3	chr5	111121066	111121126	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	3	-inf
chr18	24743837	24743881	protein_coding	Slc39a6	exon	ENSMUSG00000024270	ProperStrand	16	chr7	116664819	116664909	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-8.3496
chr7	133572318	133572334	protein_coding-noncoding	Rabep2	utr5	ENSMUSG00000030727	ProperStrand	14	chr16	23111448	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.7143
chr13	8766370	8766421	protein_coding	Adarb2	utr3	ENSMUSG00000052551	NonProperStrand	61	chr19	8799856	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-4.9149
chr7	52122836	52124774	protein_coding	Ptov1	exon	ENSMUSG00000038502	ProperStrand	26	chr2	130102053	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-7.0135
chr19	4439889	4439989	lincRNA	A930001C03Rik	intron	ENSMUSG00000087132	ProperStrand	6	chr10	110918636	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	4	-18.9906
chr16	18400885	18401669	protein_coding	Arvcf	exon	ENSMUSG00000000325	ProperStrand	28	chr7	51505505	51505592	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	1	-10.3178
chr1	136999391	136999443	protein_coding	Lgr6	intron	ENSMUSG00000042793	ProperStrand	5	chr15	98350146	98350183	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-9.8528
chr2	168580108	168580208	protein_coding	Sall4	exon	ENSMUSG00000027547	ProperStrand	82	chr5	143080825	143080845	protein_coding	Mmd2	intron	ENSMUSG00000039533	ProperStrand	5	1	-17.8306
chr6	81992907	81992926	protein_coding	Fam176a	intron	ENSMUSG00000035104	ProperStrand	64	chr19	8798740	8798794	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	2	-7.7554
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr17	45706002	45706228	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	1	-0.7221
chr13	8756715	8766305	protein_coding	Adarb2	utr3	ENSMUSG00000052551	ProperStrand	292	chr17	13112490	13112528	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-1.7779
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	ProperStrand	10	chr16	23110521	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	NonProperStrand	16	1	-19.9348
chr9	15119631	15119767	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	chr1	162968211	162968293	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	16	-2.6260
chr5	53255725	53255746	protein_coding	Anapc4	exon	ENSMUSG00000029176	ProperStrand	11	chr12	82317769	82317785	protein_coding	Slc8a3	exon	ENSMUSG00000079055	ProperStrand	126	1	-15.2760
mmu-miR-3473b	0	17	miRNA	mmu-miR-3473b	.	mmu-miR-3473b	ProperStrand	33	chr10	57504799	57504815	protein_coding	Fabp7	utr5	ENSMUSG00000019874	ProperStrand	16	1	-17.0731
chr4	3842830	3865418	protein_coding	Plag1	utr5	ENSMUSG00000003282	ProperStrand	8	chr16	23110911	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.2180
chr7	134011863	134022524	protein_coding	Taok2	exon	ENSMUSG00000059981	ProperStrand	47	chr16	23110902	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	14	-21.3601
chr7	139833256	139834171	protein_coding	Lhpp	exon	ENSMUSG00000030946	ProperStrand	35	chr19	8963062	8963083	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.2191
chr15	95515136	95515226	LTR	MTB_Mm-int	MaLR	chr15MTB_Mm-int95514479	ProperStrand	1	chr7	118219605	118219685	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-inf
chr2	162915296	162915315	LTR	RLTR11B	ERVK	chr2RLTR11B162915116	ProperStrand	29	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.6451
chr17	71150669	71150769	protein_coding	Dlgap1	intron	ENSMUSG00000003279	NonProperStrand	36	chr5	34326715	34326731	protein_coding	Gm1673	exon	ENSMUSG00000070858	NonProperStrand	4	1	-19.8943
chr5	115956842	115956858	protein_coding	Pxn	utr5	ENSMUSG00000029528	ProperStrand	171	chr11	6428113	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.4613
chr6	34107100	34107124	protein_coding	Slc35b4	utr3	ENSMUSG00000018999	ProperStrand	11	chr11	68886963	68887040	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	3	-17.1710
chr9	64022897	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	chr2	166890780	166890844	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	1	-5.1446
chr11	94505698	94506167	protein_coding	Lrrc59	utr3	ENSMUSG00000020869	ProperStrand	115	chr15	34370545	34370625	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-4.2375
mmu-miR-7667-5p	1	19	miRNA	mmu-miR-7667-5p	.	mmu-miR-7667-5p	NonProperStrand	1	chr10	110918633	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-inf
chr10	59762776	59762955	protein_coding	Psap	exon	ENSMUSG00000004207	ProperStrand	124	chr9	15119631	15119711	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.4649
chr9	80159115	80159195	protein_coding	Myo6	utr3	ENSMUSG00000033577	ProperStrand	29	chr16	23110939	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-3.5149
chr4	154931664	154931707	protein_coding	Gnb1	utr3	ENSMUSG00000029064	ProperStrand	69	chr18	82773672	82773688	protein_coding	Zfp236	exon	ENSMUSG00000041258	NonProperStrand	117	1	-11.6907
chr9	40610564	40610664	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr5	108333591	108333641	snoRNA	ENSMUSG00000064453_Snord21	.	ENSMUSG00000064453	ProperStrand	201	17	-inf
chr1	173934804	173934894	protein_coding	Vangl2	exon	ENSMUSG00000026556	ProperStrand	37	chr1	88247782	88247862	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	2	-9.8435
chr17	25856150	25856191	protein_coding	Chtf18	exon	ENSMUSG00000019214	ProperStrand	38	chr16	23111694	23111786	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-9.5690
chr2	90235300	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	94717151	94717167	protein_coding	Jun	exon	ENSMUSG00000052684	NonProperStrand	3	2	-17.9085
chr7	74189892	74189909	protein_coding	Adamts17	intron	ENSMUSG00000058145	NonProperStrand	73	chr7	29136525	29136599	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.0406
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr8	127353807	127353824	protein_coding	Trim67	utr3	ENSMUSG00000036913	NonProperStrand	8	1	-12.9758
chr6	124696946	124697076	protein_coding	Atn1	exon	ENSMUSG00000004263	ProperStrand	20	chr4	131908689	131908719	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.0012
chr7	125994167	125994186	protein_coding	2310008H09Rik	exon	ENSMUSG00000030980	ProperStrand	42	chr11	6519912	6519944	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	2	-13.7722
chr8	24085563	24169032	protein_coding	Ank1	utr5	ENSMUSG00000031543	ProperStrand	47	chr4	131908686	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-6.4701
chr7	52713925	52713955	protein_coding	Ftl1	exon	ENSMUSG00000050708	ProperStrand	807	chr15	98356870	98356913	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	1	-2.7831
chr15	5028411	5028501	DNA	Charlie12	MER1_type	chr15Charlie125028375	NonProperStrand	1	chr15	5028808	5028888	SINE	B2_Mm1t	B2	chr15B2_Mm1t5028740	ProperStrand	1	1	-inf
chr4	155029518	155029690	protein_coding	Mib2	exon	ENSMUSG00000029060	ProperStrand	21	chr16	23110852	23110932	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.5481
chr16	18945289	18945391	protein_coding	Hira	intron	ENSMUSG00000022702	ProperStrand	28	chr14	52829520	52829568	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-9.7375
chr11	116400961	116401115	protein_coding	Ube2o	exon	ENSMUSG00000020802	ProperStrand	134	chr5	115939540	115939602	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	10	-19.0134
chr9	114005138	114005154	protein_coding	Susd5	exon	ENSMUSG00000086596	ProperStrand	10	chr1	162965980	162966041	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-7.1350
chr8	86999502	86999525	protein_coding	Cacna1a	intron	ENSMUSG00000034656	ProperStrand	35	chr10	90581034	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-5.8603
chr7	116664796	116664909	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	chr1	162966812	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	19	-1.7119
chr10	59412617	59412670	protein_coding	Ddit4	utr3	ENSMUSG00000020108	ProperStrand	49	chr18	35716833	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.5106
chr11	87254504	87270004	protein_coding	Tex14	intron	ENSMUSG00000010342	ProperStrand	41	chr10	23505187	23505282	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-5.0969
chr9	44598075	44598093	protein_coding	Ift46	intron	ENSMUSG00000002031	NonProperStrand	28	chr3	84781550	84781578	protein_coding	Fbxw7	utr3	ENSMUSG00000028086	ProperStrand	11	1	-18.2854
chr10	44522783	44522873	LTR	MLT1A1	MaLR	chr10MLT1A144522780	ProperStrand	1	chr10	44522655	44522735	SINE	PB1D9	Alu	chr10PB1D944522662	NonProperStrand	1	1	-inf
chr4	83938726	83938799	protein_coding	Bnc2	exon	ENSMUSG00000028487	ProperStrand	76	chr1	89673626	89673726	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-2.8402
chr19	7349069	7349149	protein_coding	Rcor2	utr3	ENSMUSG00000024968	ProperStrand	120	chr14	24251850	24251866	protein_coding	Kcnma1	intron	ENSMUSG00000063142	NonProperStrand	104	1	-10.8165
chr16	8856167	8856188	protein_coding	1810013L24Rik	utr3	ENSMUSG00000022507	ProperStrand	20	chr9	57100963	57101077	protein_coding	1700017B05Rik	utr3	ENSMUSG00000032300	ProperStrand	22	3	-20.5099
chr3	151894967	151895362	protein_coding	Fubp1	exon	ENSMUSG00000028034	ProperStrand	56	chr19	8800373	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-3.6576
chr4	63245994	63246049	protein_coding	6330416G13Rik	utr3	ENSMUSG00000045917	ProperStrand	6	chr11	77996557	77996621	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-10.8210
chr15	79913288	79913333	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr7	59117161	59117197	protein_coding	Fancf	exon	ENSMUSG00000092118	ProperStrand	1	1	-inf
chr11	106934710	106934760	protein_coding	Bptf	exon	ENSMUSG00000040481	ProperStrand	70	chr17	35087894	35087948	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	3	-11.5860
chr10	88877023	88877091	protein_coding	Gas2l3	exon	ENSMUSG00000074802	ProperStrand	16	chr16	23110982	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.9771
chr13	12133469	12133485	protein_coding	Ryr2	intron	ENSMUSG00000021313	ProperStrand	61	chr14	31827477	31827515	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-6.9119
chr4	90177087	90177167	LTR	RLTR23	ERV1	chr4RLTR2390177075	NonProperStrand	1	chr1	37571346	37571436	protein_coding	Mgat4a	intron	ENSMUSG00000026110	NonProperStrand	12	1	-inf
chr19	5801223	5801323	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr9	64024939	64024998	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	1	-3.5159
chr10	85456343	85456359	protein_coding	Bpifc	intron	ENSMUSG00000050108	ProperStrand	17	chr19	8798484	8798517	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-7.7258
chrX	159467727	159467788	protein_coding	Ctps2	utr3	ENSMUSG00000031360	ProperStrand	11	chr10	23505152	23505201	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.1476
chr17	36143399	36143479	protein_coding	H2-T24	utr3	ENSMUSG00000053835	ProperStrand	1	chr5	151137529	151137619	protein_coding	Fry	intron	ENSMUSG00000056602	NonProperStrand	11	1	-inf
chr8	72504568	72504658	protein_coding	Gatad2a	intron	ENSMUSG00000036180	ProperStrand	112	chr5	108336411	108336491	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-3.6985
chr3	108228259	108228275	protein_coding	Sars	utr3	ENSMUSG00000068739	NonProperStrand	200	chr9	120038467	120038550	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.1273
chr3	88892965	88892995	protein_coding	Rusc1	exon	ENSMUSG00000041263	ProperStrand	7	chr4	131908685	131908751	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-17.0861
chr11	82757125	82757141	antisense	1700003F17Rik	.	ENSMUSG00000086327	NonProperStrand	12	chr4	131908356	131908388	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.2270
chrX	165757435	165757451	protein_coding	Hccs	exon	ENSMUSG00000031352	ProperStrand	6	chr11	106362337	106362381	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-10.5659
chrX	84483701	84483752	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr19	8799829	8799898	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	5	-5.1960
chr11	96678843	96689150	protein_coding	Nfe2l1	utr5	ENSMUSG00000038615	ProperStrand	118	chr10	23505152	23505284	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-2.7895
chr10	77093619	77093693	protein_coding	Ube2g2	intron	ENSMUSG00000009293	ProperStrand	4	chr2	121949511	121949527	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	1	-15.9808
chr18	10725866	10725883	protein_coding	Mib1	utr5	ENSMUSG00000024294	NonProperStrand	3	chr2	26768064	26768119	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	1	-14.7575
chr8	75655766	75877284	protein_coding	Large	utr5	ENSMUSG00000004383	ProperStrand	48	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.1542
chr17	26257342	26257384	protein_coding	Tmem8	exon	ENSMUSG00000024180	ProperStrand	10	chr4	132394298	132394398	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	1	-12.8032
chr6	143021135	143026793	protein_coding	5730419I09Rik	exon	ENSMUSG00000030279	ProperStrand	81	chr11	69483194	69483274	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.9541
chr11	75472218	75473726	protein_coding	Myo1c	exon	ENSMUSG00000017774	ProperStrand	38	chr6	87055529	87055545	protein_coding	D6Ertd527e	intron	ENSMUSG00000090891	NonProperStrand	3	1	-inf
chr15	82980084	82980225	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr16	23111695	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	23	-3.9472
chr1	132742959	132742975	protein_coding	Pigr	exon	ENSMUSG00000026417	NonProperStrand	48	chr11	69483136	69483226	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.8373
chr13	43576398	43576488	Simple_repeat	(CGGG)n	Simple_repeat	chr13(CGGG)n43576414	NonProperStrand	1	chr14	79394328	79394925	protein_coding	1300010F03Rik	exon	ENSMUSG00000058997	ProperStrand	29	1	-inf
chr17	25146231	25146282	protein_coding	Cramp1l	intron	ENSMUSG00000038002	ProperStrand	22	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-7.1904
chr8	90657811	90657891	protein_coding	Tmem188	utr3	ENSMUSG00000036810	ProperStrand	14	chr2	26493400	26493490	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-6.5906
chr12	111887724	111887824	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr1	162967119	162967178	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	3	-9.7499
chr3	90017717	90017734	protein_coding	Rab13	utr5	ENSMUSG00000027935	NonProperStrand	18	chr4	131908753	131908869	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.1942
chr15	25850429	25850447	protein_coding	Fam134b	intron	ENSMUSG00000022270	NonProperStrand	9	chr19	8798484	8798516	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-9.0452
chr8	63398301	63398324	protein_coding	Clcn3	exon	ENSMUSG00000004319	ProperStrand	93	chr10	23505152	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-3.6470
chr3	103553236	103553326	protein_coding	Hipk1	exon	ENSMUSG00000008730	ProperStrand	23	chrX	34622941	34623021	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-4.9855
chr6	122680086	122681428	protein_coding	Slc2a3	exon	ENSMUSG00000003153	ProperStrand	682	chr12	107076899	107076979	protein_coding	Papola	utr3	ENSMUSG00000021111	ProperStrand	67	1	-8.2302
chr10	26766750	26766771	protein_coding	Lama2	intron	ENSMUSG00000019899	NonProperStrand	36	chr6	94776854	94776876	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	1	-10.1300
chr5	122916878	122916903	protein_coding	Atp2a2	exon	ENSMUSG00000029467	ProperStrand	166	chr3	68889026	68889126	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	3	-4.5028
chr4	68423440	68423456	protein_coding	Dbc1	exon	ENSMUSG00000028351	ProperStrand	78	chr1	33828651	33828669	protein_coding	Zfp451	intron	ENSMUSG00000042197	NonProperStrand	393	1	-9.0226
chr4	53557519	53557540	protein_coding	Slc44a1	exon	ENSMUSG00000028412	ProperStrand	38	chr4	131865935	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.5179
chr6	55029361	55029461	protein_coding	Gars	utr3	ENSMUSG00000029777	ProperStrand	71	chr9	15118323	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-5.4337
chr11	84800000	84800040	protein_coding	Usp32	exon	ENSMUSG00000000804	ProperStrand	45	chr4	131908689	131908745	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.6382
chrX	130496426	130496668	protein_coding	Sytl4	exon	ENSMUSG00000031255	ProperStrand	169	chrX	84483699	84483716	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-6.1950
chr16	11821908	11821976	protein_coding	Cpped1	intron	ENSMUSG00000065979	ProperStrand	13	chr4	131908704	131908794	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.8088
chr7	13610189	13610247	protein_coding	Trim28	exon	ENSMUSG00000005566	ProperStrand	296	chr1	162966000	162966041	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-1.0242
chr15	37932030	37932121	protein_coding	Ubr5	exon	ENSMUSG00000037487	ProperStrand	258	chrX	34622910	34622990	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-0.9013
chr1	160778405	160778421	protein_coding	Pappa2	exon	ENSMUSG00000073530	ProperStrand	13	chr9	64022901	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-11.1336
chr15	98356776	98356913	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	chr7	29136533	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	12	-2.5404
chr9	96896492	96896592	protein_coding	Spsb4	exon	ENSMUSG00000046997	ProperStrand	4	chr16	23111433	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-6.3168
chr8	27062446	27062463	protein_coding	Hgsnat	exon	ENSMUSG00000037260	ProperStrand	41	chr19	8799581	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-7.5257
chrX	150314803	150314883	LINE	L1Md_F	L1	chrXL1Md_F150314278	NonProperStrand	1	chr2	117655259	117655349	lincRNA	4930412B13Rik	intron	ENSMUSG00000086221	NonProperStrand	1	1	-inf
chr4	139017780	139018109	protein_coding	Ubr4	exon	ENSMUSG00000066036	ProperStrand	304	chr4	116827119	116827171	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-3.8961
chr12	17284103	17285329	protein_coding	Pdia6	exon	ENSMUSG00000020571	ProperStrand	114	chr13	63643490	63643580	protein_coding	Ptch1	exon	ENSMUSG00000021466	ProperStrand	50	1	-12.3913
chr10	75851842	75872313	protein_coding	Pcnt	exon	ENSMUSG00000001151	ProperStrand	127	chr10	23505178	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-0.9238
chr6	70794803	70794819	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chr9	96218828	96218844	protein_coding	Tfdp2	utr3	ENSMUSG00000032411	ProperStrand	95	1	-10.4983
chr8	32260335	32260427	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	9	-0.9613
chr9	40611157	40611210	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr5	77129362	77129380	protein_coding	C530008M17Rik	intron	ENSMUSG00000036377	NonProperStrand	7	1	-12.5603
chr2	154111351	154111377	LTR	RLTR19-int	ERVK	chr2RLTR19-int154111332	NonProperStrand	2	chr9	60719602	60719667	protein_coding	Uaca	exon	ENSMUSG00000034485	ProperStrand	109	1	-19.6713
chr2	11700428	11700497	protein_coding	Ankrd16	exon	ENSMUSG00000047909	ProperStrand	4	chr1	63225274	63225297	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	2	-inf
chr7	13896618	13896680	protein_coding	Lig1	utr3	ENSMUSG00000056394	ProperStrand	89	chr9	65049529	65049606	snRNA	ENSMUSG00000075930_U5	.	ENSMUSG00000075930	ProperStrand	175	4	-19.4755
chr8	108743916	108774284	protein_coding	Prmt7	exon	ENSMUSG00000060098	ProperStrand	43	chr16	23111395	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	5	-9.1899
chr7	133941248	133942616	protein_coding	Aldoa	utr5	ENSMUSG00000030695	ProperStrand	721	chr11	106362346	106362362	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	2	-2.6498
chr2	24910034	24910050	protein_coding	Nelf	utr5	ENSMUSG00000006476	NonProperStrand	20	chr12	17552948	17552983	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-7.2696
chr11	3225305	3225385	lincRNA	Gm12592	intron	ENSMUSG00000053263	ProperStrand	3	chr1	174298705	174298795	protein_coding	Kcnj10	intron	ENSMUSG00000044708	NonProperStrand	3	1	-inf
chr4	88054896	88056616	protein_coding	BC057079	utr3	ENSMUSG00000038368	ProperStrand	52	chr11	77995188	77995231	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	2	-10.4661
chr17	8593808	8593884	processed_transcript	T2	.	ENSMUSG00000058159	ProperStrand	11	chr16	23111221	23111237	protein_coding	Eif4a2	exon	ENSMUSG00000022884	ProperStrand	356	4	-inf
chr5	120295281	120295300	protein_coding	Tbx5	intron	ENSMUSG00000018263	NonProperStrand	5	chr12	17552960	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-10.1945
chr5	135191207	135191558	protein_coding	Eln	exon	ENSMUSG00000029675	ProperStrand	4	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	2	-inf
chr19	23140045	23140062	lincRNA	C330002G04Rik	intron	ENSMUSG00000087169	ProperStrand	34	chr10	23505184	23505235	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.0925
chr1	74481614	74481630	protein_coding	Vil1	utr3	ENSMUSG00000026175	NonProperStrand	2	chr5	31546218	31546250	protein_coding	Nrbp1	exon	ENSMUSG00000029148	ProperStrand	10	1	-inf
chrX	130596310	130596337	protein_coding	Cstf2	exon	ENSMUSG00000031256	ProperStrand	26	chr11	69483136	69483212	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.9646
chr2	179322377	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr7	52958453	52958469	protein_coding	Car11	exon	ENSMUSG00000003273	NonProperStrand	250	1	-8.3560
chr15	29157258	29157274	LINE	Lx8	L1	chr15Lx829156540	ProperStrand	19	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-11.2563
chr6	124951595	124951612	protein_coding	C530028O21Rik	exon	ENSMUSG00000030329	ProperStrand	12	chr8	32260335	32260429	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	4	-19.8261
chr6	82597828	82597874	protein_coding	Pole4	utr3	ENSMUSG00000030042	ProperStrand	11	chr17	24857784	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-5.4831
chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	chr7	131126976	131126994	protein_coding	Hs3st4	exon	ENSMUSG00000078591	NonProperStrand	10	1	-16.1884
chr2	146660146	146660163	antisense	Gm14114	.	ENSMUSG00000087618	NonProperStrand	11	chr9	120039544	120039622	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	3	-15.4383
chr10	79256537	79256554	protein_coding	Palm	intron	ENSMUSG00000035863	ProperStrand	58	chr19	8963087	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.3317
chr7	87247377	87247396	protein_coding	Idh2	intron	ENSMUSG00000030541	ProperStrand	21	chr10	39978341	39978431	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-7.5497
chr5	74489215	74489295	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr15	76019422	76019512	protein_coding	Plec	exon	ENSMUSG00000022565	ProperStrand	186	1	-3.4693
chr3	131228047	131228063	protein_coding	Papss1	intron	ENSMUSG00000028032	ProperStrand	11	chr1	88252837	88252899	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-10.0831
chr9	56773800	56773900	protein_coding	Snx33	exon	ENSMUSG00000032733	ProperStrand	4	chr1	162968218	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-12.4736
chr15	25729184	25729264	protein_coding	Myo10	exon	ENSMUSG00000022272	ProperStrand	168	chr19	9951706	9951796	protein_coding	Incenp	intron	ENSMUSG00000024660	ProperStrand	111	1	-10.0123
chr17	85482653	85489599	protein_coding	Prepl	utr5	ENSMUSG00000024127	ProperStrand	106	chr5	54036856	54036902	protein_coding	Rbpj	intron	ENSMUSG00000039191	ProperStrand	96	1	-11.2257
chrX	97772776	97772792	protein_coding	Awat1	exon	ENSMUSG00000015665	NonProperStrand	4	chr11	84333874	84333892	protein_coding	Lhx1	exon	ENSMUSG00000018698	ProperStrand	2	2	-inf
chr9	108237482	108238993	protein_coding	Rhoa	exon	ENSMUSG00000007815	ProperStrand	45	chr1	93263065	93263081	protein_coding	Fam132b	exon	ENSMUSG00000047443	NonProperStrand	98	1	-12.9091
chr7	116663659	116663749	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	NonProperStrand	51	chr19	8963031	8963115	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-10.4828
chr11	101625521	101625584	protein_coding	Dhx8	exon	ENSMUSG00000034931	ProperStrand	48	chr9	15118326	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	3	-9.5225
chr7	108993439	108993507	protein_coding	Folr2	intron	ENSMUSG00000032725	NonProperStrand	3	chr2	130102057	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	3	-inf
chr5	65613244	65613335	protein_coding	Wdr19	exon	ENSMUSG00000037890	ProperStrand	71	chr3	102854268	102854359	protein_coding	Csde1	exon	ENSMUSG00000068823	ProperStrand	122	50	-19.1633
chr18	60981338	60982467	protein_coding	Tcof1	utr3	ENSMUSG00000024613	ProperStrand	68	chr11	69483199	69483279	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	4	-8.3143
chr6	119165416	119165516	protein_coding	Dcp1b	exon	ENSMUSG00000041477	ProperStrand	5	chr1	88247835	88247858	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-10.2025
chr5	65702235	65702332	protein_coding-noncoding	Rfc1	utr3	ENSMUSG00000029191	ProperStrand	5	chr3	88715213	88715230	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	5	-inf
chr5	74489543	74489593	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr13	101541068	101541087	protein_coding	Cenph	intron	ENSMUSG00000045273	NonProperStrand	45	1	-6.1882
chr7	52251948	52251965	protein_coding	Bcl2l12	exon	ENSMUSG00000003190	NonProperStrand	7	chr9	120038467	120038529	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-7.2707
chr9	59516844	59526769	protein_coding	Pkm2	utr3	ENSMUSG00000032294	ProperStrand	1296	chr16	23111689	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	21	-3.1066
chr4	34622428	34622765	protein_coding	Slc35a1	exon	ENSMUSG00000028293	ProperStrand	9	chr7	116663634	116663724	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-10.1420
chr8	13159389	13159405	protein_coding	Lamp1	exon	ENSMUSG00000031447	ProperStrand	92	chr4	131908809	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.7029
chr13	55026574	55026664	DNA	Tigger7	MER2_type	chr13Tigger755026599	NonProperStrand	1	chr13	55026417	55026497	LTR	MTC	MaLR	chr13MTC55026167	ProperStrand	1	1	-inf
chr1	91358413	91358430	protein_coding	Agap1	intron	ENSMUSG00000055013	ProperStrand	229	chr16	17276523	17276540	protein_coding	Tmem191c	exon	ENSMUSG00000055692	ProperStrand	16	1	-13.3156
chr2	29748659	29776532	protein_coding	Odf2	exon	ENSMUSG00000026790	ProperStrand	58	chr11	69483136	69483283	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	8	-21.1813
chr17	46814084	46814100	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr4	21710049	21710128	protein_coding	Usp45	exon	ENSMUSG00000040455	ProperStrand	40	1	-10.0469
chr7	71041844	71041907	protein_coding	Klf13	intron	ENSMUSG00000052040	ProperStrand	28	chr15	79908975	79909019	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-6.9827
chr4	45387400	45387469	protein_coding	Dcaf10	utr3	ENSMUSG00000035572	ProperStrand	4	chr9	15119704	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-8.0470
chr1	59539683	59539700	protein_coding	Fzd7	utr5	ENSMUSG00000041075	ProperStrand	373	chr8	73419657	73419712	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-1.0801
chr8	53422364	53422454	snRNA	ENSMUSG00000064682_U2	.	ENSMUSG00000064682	ProperStrand	55	chr11	6428089	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.3504
chr10	79756580	79756770	protein_coding	Rps15	exon	ENSMUSG00000063457	ProperStrand	119	chr1	102076757	102076791	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	1	-8.0658
chr3	121381031	121381048	protein_coding	4930432M17Rik	intron	ENSMUSG00000074248	NonProperStrand	33	chr4	131908299	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.3621
chr1	97108988	97109005	LTR	RLTR23	ERV1	chr1RLTR2397108982	ProperStrand	8	chr9	15118322	15118362	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-7.4559
chr7	134341340	134341357	protein_coding	Tbc1d10b	utr3	ENSMUSG00000042492	ProperStrand	187	chr8	32260365	32260426	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-2.5482
chr6	81992905	81992925	protein_coding	Fam176a	intron	ENSMUSG00000035104	ProperStrand	64	chr2	24948132	24950272	protein_coding	Noxa1	exon	ENSMUSG00000036805	ProperStrand	1	1	-inf
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr11	103226497	103226560	protein_coding	Plekhm1	utr3	ENSMUSG00000034247	ProperStrand	23	1	-10.7287
chr2	102154433	102154455	protein_coding	Trim44	intron	ENSMUSG00000027189	ProperStrand	26	chr6	48410411	48410428	protein_coding	Sspo	exon	ENSMUSG00000029797	NonProperStrand	94	2	-19.0791
chr3	95648203	95648246	protein_coding	Prpf3	exon	ENSMUSG00000015748	ProperStrand	29	chr9	64023699	64023746	snoRNA	ENSMUSG00000064918_SNORD18	.	ENSMUSG00000064918	ProperStrand	370	1	-11.1377
chr8	107912452	107912506	protein_coding	Kctd19	exon	ENSMUSG00000051648	ProperStrand	1	chr10	41644311	41644329	protein_coding	Armc2	exon	ENSMUSG00000071324	ProperStrand	281	1	-inf
chr1	183835935	183836008	protein_coding	Enah	utr3	ENSMUSG00000022995	ProperStrand	196	chr4	98400652	98400742	protein_coding	L1td1	exon	ENSMUSG00000087166	ProperStrand	43	1	-11.6110
chr6	39752399	39752441	protein_coding	Mrps33	utr3	ENSMUSG00000029918	ProperStrand	19	chr9	120038613	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.2199
chr9	64916281	64916381	protein_coding	Dpp8	intron	ENSMUSG00000032393	ProperStrand	31	chr9	15119724	15119764	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-6.4865
chr2	180815357	180815373	protein_coding	Kcnq2	utr3	ENSMUSG00000016346	ProperStrand	5	chrX	108559870	108576466	protein_coding	Rps6ka6	exon	ENSMUSG00000025665	ProperStrand	17	1	-19.6626
chr18	61997513	61997531	protein_coding	Ablim3	intron	ENSMUSG00000032735	ProperStrand	9	chr18	35714182	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	5	-20.4878
chr1	88753892	88775010	protein_coding	Dis3l2	exon	ENSMUSG00000053333	ProperStrand	20	chr4	131865853	131865943	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.6810
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-2.0083
chr9	43919824	43919840	protein_coding	Rnf26	exon	ENSMUSG00000053128	NonProperStrand	18	chr4	155500388	155500524	protein_coding	9430015G10Rik	utr3	ENSMUSG00000059939	ProperStrand	17	1	-18.1717
chr15	9971525	9971605	LINE	L1_Mur2	L1	chr15L1_Mur29971300	NonProperStrand	1	chr15	8595797	8595887	protein_coding	Slc1a3	exon	ENSMUSG00000005360	ProperStrand	10	1	-inf
chr5	135686634	135686734	protein_coding	Baz1b	exon	ENSMUSG00000002748	ProperStrand	83	chr5	108336412	108336490	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-4.2600
chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	chr8	13416896	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-2.6467
chr14	50371195	50371212	protein_coding	3632451O06Rik	exon	ENSMUSG00000036242	ProperStrand	5	chr1	59539683	59539700	protein_coding	Fzd7	utr5	ENSMUSG00000041075	ProperStrand	373	1	-14.8133
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr9	83678799	83681877	protein_coding	Elovl4	exon	ENSMUSG00000032262	ProperStrand	159	1	-3.1294
chr17	46663594	46663610	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr11	106737252	106781542	protein_coding	Smurf2	exon	ENSMUSG00000018363	ProperStrand	79	1	-8.6794
chr5	32794695	32794739	protein_coding	Ppp1cb	utr3	ENSMUSG00000014956	ProperStrand	25	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-5.2802
chr18	39165985	39166094	protein_coding	Arhgap26	intron	ENSMUSG00000036452	ProperStrand	46	chr4	131908236	131908299	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	5	-9.4221
chr13	101484637	101484732	protein_coding	Cdk7	intron	ENSMUSG00000069089	ProperStrand	12	chr8	32260335	32260385	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	4	-19.8261
chr11	62416574	62416659	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr5	130295416	130295506	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-1.4236
chr2	158185522	158185568	lincRNA	9430008C03Rik	exon	ENSMUSG00000085385	ProperStrand	1039	chr2	158182180	158185667	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	54	-19.1117
chr11	77995239	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	chr7	16524110	16524209	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	6	-15.3981
chr9	65974881	65974975	protein_coding	Fam96a	intron	ENSMUSG00000032381	ProperStrand	3	chr7	148634776	148634836	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-10.2358
chr10	84158345	84158389	protein_coding	Polr3b	exon	ENSMUSG00000034453	ProperStrand	41	chr13	51743581	51743626	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	4	-inf
chr14	69861577	69861593	protein_coding	Slc25a37	utr3	ENSMUSG00000034248	ProperStrand	37	chr13	51743581	51743624	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-7.8256
chr17	29631565	29631665	protein_coding	Pim1	exon	ENSMUSG00000024014	ProperStrand	13	chr18	35716683	35716761	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.9970
chr12	21397106	21397196	protein_coding	Ywhaq	utr3	ENSMUSG00000076432	ProperStrand	70	chr17	24857721	24857801	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.0429
chr14	15572352	15572371	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr18	35714238	35714292	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-3.1622
chr8	46593769	46593785	protein_coding	Sorbs2	intron	ENSMUSG00000031626	ProperStrand	50	chr17	35299551	35299642	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	2	-8.4496
chr7	13516166	13516200	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr5	111121066	111121125	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	2	-3.7969
chr8	72287172	72287188	protein_coding	Zfp866	utr3	ENSMUSG00000043090	NonProperStrand	134	chr1	162966188	162966269	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	2	-9.7262
chr17	81439409	81439465	protein_coding	Thumpd2	intron	ENSMUSG00000024246	ProperStrand	8	chr8	125731536	125731552	protein_coding	Gm20388	intron	ENSMUSG00000092329	ProperStrand	295	1	-14.2564
chr19	4103272	4103362	protein_coding	Pitpnm1	exon	ENSMUSG00000024851	ProperStrand	8	chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	1	-13.7142
chr7	52958453	52958469	protein_coding	Car11	exon	ENSMUSG00000003273	NonProperStrand	250	chr11	44377735	44377788	protein_coding	Rnf145	utr3	ENSMUSG00000019189	ProperStrand	46	1	-10.9875
chr7	38752309	38752359	protein_coding	C80913	intron	ENSMUSG00000030421	ProperStrand	25	chr16	23110901	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.5091
chr11	101466255	101466345	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	chr17	24665418	24665499	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	2	-2.2007
chr8	108233712	108233730	protein_coding	4933405L10Rik	exon	ENSMUSG00000013158	ProperStrand	94	chr18	35714217	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	3	-6.8900
chr5	108336363	108336490	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	chr13	49779746	49779802	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	7	-4.3659
chr19	29720466	29720544	protein_coding	Ermp1	exon	ENSMUSG00000046324	ProperStrand	103	chr1	162965992	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	7	-17.7788
chr8	13416896	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr14	31827477	31827545	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	2	-1.7908
chr9	78327180	78327258	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr10	127521200	127521270	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	1	-2.1428
chr2	112080121	112080146	protein_coding	Lpcat4	exon	ENSMUSG00000027134	ProperStrand	14	chr15	79084215	79084232	protein_coding	Slc16a8	exon	ENSMUSG00000032988	ProperStrand	3	1	-inf
chr11	116535915	116535982	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr8	131256861	131256961	protein_coding	Itgb1	utr3	ENSMUSG00000025809	ProperStrand	35	1	-6.9798
chr12	4144212	4144264	protein_coding	Adcy3	intron	ENSMUSG00000020654	ProperStrand	33	chr1	72896147	72896199	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	3	-19.5507
chr17	59168059	59168080	LINE	Lx8	L1	chr17Lx859167638	ProperStrand	2	chr2	84530865	84531297	protein_coding	Zdhhc5	exon	ENSMUSG00000034075	NonProperStrand	144	1	-19.0122
mmu-miR-6238	3	20	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr7	116663634	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-1.2289
chr4	15771790	15771870	LINE	L1Md_F3	L1	chr4L1Md_F315771116	NonProperStrand	1	chr7	54442356	54442446	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	1	-inf
chr5	64662342	64662407	protein_coding	Tbc1d1	exon	ENSMUSG00000029174	ProperStrand	44	chr7	29136616	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.9030
chrX	91214584	91214615	protein_coding	AU015836	exon	ENSMUSG00000081044	NonProperStrand	2	chr16	23110984	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-inf
chr11	77996560	77996619	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	chr11	77995191	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	3	-1.4307
chr4	138576794	138576810	protein_coding	Tmco4	exon	ENSMUSG00000041143	ProperStrand	47	chr4	56910551	56910618	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-6.5900
chr17	56755810	56755865	protein_coding	Lonp1	exon	ENSMUSG00000041168	ProperStrand	83	chr9	120038472	120038562	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.4715
chr7	31354052	31354140	protein_coding	Wbp7	utr3	ENSMUSG00000006307	ProperStrand	180	chr19	47205289	47205305	protein_coding	Pdcd11	utr3	ENSMUSG00000025047	ProperStrand	137	1	-9.4533
chr4	100507814	100507835	protein_coding	Cachd1	intron	ENSMUSG00000028532	NonProperStrand	18	chr8	129468778	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	NonProperStrand	22	1	-17.6466
chr2	106560515	106560532	protein_coding	Mpped2	intron	ENSMUSG00000016386	NonProperStrand	7	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-13.0159
chr1	181476979	181476995	protein_coding	Cnst	intron	ENSMUSG00000038949	ProperStrand	40	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-8.9731
chr15	68769294	68769312	protein_coding	Khdrbs3	intron	ENSMUSG00000022332	NonProperStrand	5	chr11	55296195	55296258	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-11.3158
chr4	131865852	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr16	43886792	43886924	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	14	-2.3648
chr12	64287735	64287755	LTR	RLTR44-int	ERVK	chr12RLTR44-int64286091	NonProperStrand	1	chr14	63761298	63761314	protein_coding	Ctsb	utr3	ENSMUSG00000021939	ProperStrand	48	1	-inf
chr12	104084907	104084981	protein_coding	Btbd7	intron	ENSMUSG00000041702	ProperStrand	3	chr16	23110947	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-9.5778
chr16	32644935	32645015	protein_coding	Tnk2	utr5	ENSMUSG00000022791	ProperStrand	86	chr3	108357316	108357406	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	45	-21.9644
chr11	60590425	60590441	protein_coding	Top3a	exon	ENSMUSG00000002814	ProperStrand	28	chr11	6428095	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.6242
chr16	15628697	15628715	protein_coding	Mcm4	exon	ENSMUSG00000022673	ProperStrand	51	chr5	121655069	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.0524
chr9	123501530	123501623	protein_coding	Sacm1l	utr3	ENSMUSG00000025240	ProperStrand	12	chr8	108129152	108129169	protein_coding	Fam65a	utr5	ENSMUSG00000038604	NonProperStrand	7	3	-inf
chr17	23955822	23955839	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	chr4	131865865	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-2.1424
chr11	45723144	45723160	protein_coding	Clint1	utr3	ENSMUSG00000006169	NonProperStrand	273	chr5	108334194	108334330	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-2.0832
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr18	35716825	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-0.7965
chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	chr10	23505148	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	6	-1.8531
chr17	32257920	32257974	protein_coding	Notch3	utr3	ENSMUSG00000038146	ProperStrand	181	chr1	162966854	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	2	-6.8996
chr5	92487017	92493371	protein_coding	G3bp2	exon	ENSMUSG00000029405	ProperStrand	78	chr1	88247792	88247858	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-4.5912
mmu-miR-1949	1	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr10	59596564	59596626	protein_coding	Spock2	utr3	ENSMUSG00000058297	ProperStrand	6	3	-18.9103
chr1	115800708	115800738	lincRNA	9330185C12Rik	intron	ENSMUSG00000086520	ProperStrand	45	chr3	123210854	123210894	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.5489
chr3	96067078	96067145	protein_coding	Hist2h4	exon	ENSMUSG00000091405	ProperStrand	18	chr5	130300465	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.7422
chr6	134097815	134097831	protein_coding	Etv6	intron	ENSMUSG00000030199	NonProperStrand	77	chr4	122968617	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-5.7900
chrX	93136011	93136027	protein_coding	Las1l	exon	ENSMUSG00000057421	ProperStrand	248	chr12	17552949	17552994	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-2.4750
chr8	107154513	107154530	protein_coding	Rrad	exon	ENSMUSG00000031880	NonProperStrand	3	chr4	122970390	122970450	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-13.7749
chr11	80566688	80566778	protein_coding	Myo1d	intron	ENSMUSG00000035441	ProperStrand	144	chr9	101061164	101061244	protein_coding	Ppp2r3a	intron	ENSMUSG00000043154	NonProperStrand	1	1	-inf
chr12	88488443	88496424	protein_coding	Pomt2	exon	ENSMUSG00000034126	NonProperStrand	331	chr2	32075138	32075183	protein_coding	Prrc2b	exon	ENSMUSG00000039262	ProperStrand	344	1	-6.4169
chr16	50225157	50225187	protein_coding	Bbx	exon	ENSMUSG00000022641	ProperStrand	18	chr7	116663640	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.7447
chr1	33828651	33828669	protein_coding	Zfp451	intron	ENSMUSG00000042197	NonProperStrand	393	chr18	74938045	74938123	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	ProperStrand	1022	1	-3.9903
chr5	46849455	46849474	Low_complexity	CT-rich	Low_complexity	chr5CT-rich46849455	ProperStrand	1	chr5	144012608	144012660	protein_coding	Zfp316	utr3	ENSMUSG00000046658	ProperStrand	7	1	-inf
chr11	60600859	60600885	protein_coding	Smcr8	utr3	ENSMUSG00000049323	ProperStrand	46	chr4	131908809	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-2.9958
chr12	58691976	58691992	antisense	4921518K17Rik	.	ENSMUSG00000085851	ProperStrand	75	chr8	129468800	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-3.9912
chr4	53873577	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	chr13	49779667	49779747	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	2	-5.0855
chr15	79843001	79843019	protein_coding	Pdgfb	intron	ENSMUSG00000000489	ProperStrand	11	chr12	106269339	106269403	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-7.5084
chr11	57853910	57854237	protein_coding	Larp1	exon	ENSMUSG00000037331	ProperStrand	201	chr1	162967489	162967569	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	3	-4.2612
chr19	37229557	37229578	protein_coding	Cpeb3	intron	ENSMUSG00000039652	NonProperStrand	23	chr5	93611834	93611882	protein_coding	Ccni	utr3	ENSMUSG00000063015	ProperStrand	43	2	-inf
chr12	111880301	111880324	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr7	29135798	29136035	protein_coding	Rps16	utr5	ENSMUSG00000037563	ProperStrand	191	2	-10.1277
chr6	120959016	120959032	protein_coding	Mical3	exon	ENSMUSG00000003178	ProperStrand	9	chr12	114359283	114361329	protein_coding	Mta1	exon	ENSMUSG00000021144	ProperStrand	74	1	-16.8067
chr5	36220935	36220953	protein_coding	Ablim2	intron	ENSMUSG00000029095	ProperStrand	36	chr7	117422474	117422496	protein_coding	Swap70	intron	ENSMUSG00000031015	ProperStrand	47	1	-14.8609
chr18	20737970	20739058	protein_coding	Dsg2	exon	ENSMUSG00000044393	ProperStrand	60	chr4	131908689	131908739	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-2.3640
chr11	35599763	35599863	protein_coding	Pank3	utr3	ENSMUSG00000018846	ProperStrand	5	chr16	23110911	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr7	29136543	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	chr12	110874223	110874290	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	7	-5.0195
chr2	33587756	33587779	protein_coding	Fam125b	utr3	ENSMUSG00000038740	ProperStrand	28	chr15	57978172	57978260	snoRNA	ENSMUSG00000080461_SNORA11	.	ENSMUSG00000080461	ProperStrand	171	1	-12.7533
chr7	109318003	109324860	protein_coding	Nup98	utr5	ENSMUSG00000063550	ProperStrand	100	chr9	120038562	120038652	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.1598
chr10	79619965	79619995	protein_coding	Midn	utr3	ENSMUSG00000035621	ProperStrand	36	chr9	120039549	120039622	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-4.2735
chr3	19992693	19992793	protein_coding	Hltf	exon	ENSMUSG00000002428	ProperStrand	24	chr11	77995188	77995242	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-8.0147
chr4	43505656	43505846	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr15	98356819	98356914	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	12	-5.3948
chr11	86042707	86042807	protein_coding	Ints2	exon	ENSMUSG00000018068	ProperStrand	17	chr16	23110533	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-8.0121
chr14	22092143	22092162	protein_coding	Adk	intron	ENSMUSG00000039197	ProperStrand	32	chr18	31919716	31919732	protein_coding	Ammecr1l	utr5	ENSMUSG00000041915	NonProperStrand	2	1	-inf
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr5	102088568	102088584	protein_coding	Nkx6-1	exon	ENSMUSG00000035187	ProperStrand	17	1	-11.1498
chr1	133051584	133051664	protein_coding	Eif2d	intron	ENSMUSG00000026427	ProperStrand	12	chr17	35299507	35299597	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-7.9938
chr8	72828583	72829601	protein_coding	Cope	exon	ENSMUSG00000055681	ProperStrand	11	chr11	97642978	97643069	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-5.6855
chr13	110640471	110640488	protein_coding	Pde4d	intron	ENSMUSG00000021699	ProperStrand	92	chr17	45704951	45705009	protein_coding	Hsp90ab1	utr3	ENSMUSG00000023944	ProperStrand	1627	1	-5.8869
chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	chr11	77995189	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-2.8966
chr2	121369799	121369821	protein_coding	Wdr76	utr3	ENSMUSG00000027242	ProperStrand	25	chr4	131865867	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-8.3231
chr7	149761893	149761973	lincRNA	H19	exon	ENSMUSG00000000031	ProperStrand	20	chr11	101120547	101120637	protein_coding	Vps25	utr3	ENSMUSG00000078656	ProperStrand	21	13	-19.0064
chr17	56733394	56743013	protein_coding	Safb	utr3	ENSMUSG00000071054	ProperStrand	79	chr18	35716733	35716855	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	5	-9.0087
chr11	117223053	117223076	protein_coding	Sept9	utr3	ENSMUSG00000059248	ProperStrand	60	chr9	64143745	64143839	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-7.7723
chr2	152102686	152102758	protein_coding	Csnk2a1	exon	ENSMUSG00000074698	ProperStrand	91	chr18	35714194	35714284	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	5	-12.2528
chr4	57377064	57377080	lincRNA	1700042G15Rik	exon	ENSMUSG00000087044	ProperStrand	1	chr4	131908359	131908418	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-inf
chr13	45015716	45015759	protein_coding	Jarid2	utr3	ENSMUSG00000038518	ProperStrand	372	chr12	103807915	103808007	protein_coding	Itpk1	utr3	ENSMUSG00000057963	ProperStrand	47	6	-inf
chr2	147011594	147011610	protein_coding	Nkx2-2	exon	ENSMUSG00000027434	ProperStrand	47	chr18	35716810	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.5824
chr11	60275049	60275718	protein_coding	Drg2	exon	ENSMUSG00000020537	ProperStrand	13	chr16	23110942	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.3283
chr14	33153227	33153832	protein_coding	Ogdhl	exon	ENSMUSG00000021913	ProperStrand	182	chr4	139002919	139002969	protein_coding	Ubr4	exon	ENSMUSG00000066036	ProperStrand	304	1	-7.8434
chr11	8918230	8921758	protein_coding	Sun3	exon	ENSMUSG00000040985	ProperStrand	1	chr9	15119679	15119713	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-inf
chr10	128000284	128000301	protein_coding	Pa2g4	exon	ENSMUSG00000025364	ProperStrand	72	chrX	39182392	39182410	protein_coding	Thoc2	intron	ENSMUSG00000037475	NonProperStrand	3	1	-20.1291
chr7	140894150	140900621	protein_coding	Uros	utr5	ENSMUSG00000030979	ProperStrand	2	chr2	158182213	158182279	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-12.4042
chr3	53260253	53260353	protein_coding	Nhlrc3	intron	ENSMUSG00000042997	ProperStrand	12	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-4.4633
chr11	120151275	120151358	protein_coding	Bahcc1	utr3	ENSMUSG00000039741	ProperStrand	118	chr14	33005146	33005236	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	8	-20.1576
chr9	61265804	61265820	protein_coding	Tle3	utr3	ENSMUSG00000032280	ProperStrand	88	chr4	131908236	131908292	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.9116
chr7	34992883	34999189	protein_coding	Gpi1	intron	ENSMUSG00000036427	ProperStrand	288	chr10	90581054	90581144	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	2	-3.5849
chr1	191675137	191675182	protein_coding	Ptpn14	exon	ENSMUSG00000026604	ProperStrand	74	chr17	13112534	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	2	-6.9969
chr7	52710582	52710640	protein_coding	Gys1	exon	ENSMUSG00000003865	ProperStrand	28	chr10	23506278	23506303	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	2	-13.5162
chr12	21335949	21337951	protein_coding	Adam17	exon	ENSMUSG00000052593	ProperStrand	20	chr15	98350149	98350229	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-6.9313
chrX	71200514	71200594	protein_coding	Hcfc1	exon	ENSMUSG00000031386	ProperStrand	424	chr9	46017673	46018574	protein_coding	Sik3	exon	ENSMUSG00000034135	ProperStrand	49	1	-9.8047
chr11	97889682	97889741	protein_coding	Rpl19	exon	ENSMUSG00000017404	ProperStrand	120	chr7	71646670	71646689	protein_coding	Apba2	utr5	ENSMUSG00000030519	ProperStrand	7	1	-16.3485
chr8	86187819	86187835	protein_coding	Gipc1	exon	ENSMUSG00000019433	ProperStrand	60	chr17	35089195	35089224	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-5.4852
chr2	25149426	25151406	antisense	E130003G02Rik	.	ENSMUSG00000085830	ProperStrand	1	chr10	19989187	19989203	protein_coding	Mtap7	exon	ENSMUSG00000019996	NonProperStrand	16	1	-inf
chr10	127520454	127525379	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	5	-2.9929
chr3	95463709	95463729	protein_coding	Mcl1	exon	ENSMUSG00000038612	ProperStrand	75	chr4	131908689	131908748	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.9361
chr13	119166416	119166453	LTR	ORR1B2	MaLR	chr13ORR1B2119166172	ProperStrand	3	chr5	130300419	130300505	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-inf
chr6	38098088	38098106	protein_coding	D630045J12Rik	intron	ENSMUSG00000063455	NonProperStrand	13	chr5	108336363	108336424	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-7.9357
chr10	115935402	115935452	protein_coding	Cnot2	exon	ENSMUSG00000020166	ProperStrand	12	chr11	69483136	69483211	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	5	-19.4804
chr18	34586972	34586989	protein_coding	Pkd2l2	exon	ENSMUSG00000014503	NonProperStrand	3	chr1	162967489	162967562	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-9.6828
chr7	117189863	117189932	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr4	122970489	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-1.0324
chr1	169156435	169156525	protein_coding	Uck2	utr3	ENSMUSG00000026558	ProperStrand	45	chr11	69483200	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.9519
chr10	69651848	69651896	protein_coding	Ccdc6	exon	ENSMUSG00000048701	ProperStrand	72	chr11	77996557	77996606	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	3	-13.2706
chr11	69163958	69163995	protein_coding	Chd3	intron	ENSMUSG00000018474	ProperStrand	438	chr9	59518439	59518539	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	1	-3.3533
chr9	120038553	120038609	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	chr5	125884616	125884654	tRNA	tRNA1317-AlaTGC	.	1625331	ProperStrand	149	1	-1.5374
chr2	152221099	152221199	protein_coding	Sox12	utr3	ENSMUSG00000051817	ProperStrand	31	chr14	76247712	76247779	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-5.4487
chr7	86244450	86244468	protein_coding	Acan	exon	ENSMUSG00000030607	ProperStrand	38	chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-7.3636
chr8	125723341	125723538	protein_coding	Dpep1	exon	ENSMUSG00000019278	ProperStrand	2	chr11	97641536	97641590	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	1	-15.3054
chr3	101259307	101259384	protein_coding	Igsf3	exon	ENSMUSG00000042035	ProperStrand	73	chr11	106362337	106362380	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-5.4585
chr14	73910867	73910933	protein_coding	Med4	intron	ENSMUSG00000022109	ProperStrand	2	chr2	29698742	29698832	protein_coding	Urm1	utr3	ENSMUSG00000069020	ProperStrand	6	1	-inf
chr7	133939143	133939192	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	chr1	9603408	9603425	protein_coding	2610203C22Rik	intron	ENSMUSG00000079671	ProperStrand	1	1	-inf
chr7	130142257	130142347	protein_coding	Rbbp6	exon	ENSMUSG00000030779	ProperStrand	46	chr5	74489595	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	2	-7.1594
chr6	52707678	52707715	protein_coding	Tax1bp1	exon	ENSMUSG00000004535	ProperStrand	20	chr14	76247754	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-6.3209
chr17	89142073	89142090	protein_coding	Lhcgr	exon	ENSMUSG00000024107	NonProperStrand	1	chr9	15119631	15119674	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-inf
chr10	6327967	6327999	protein_coding	Mthfd1l	exon	ENSMUSG00000040675	ProperStrand	50	chr18	35716733	35716788	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-4.3786
chr1	74427192	74427418	protein_coding	Slc11a1	exon	ENSMUSG00000026177	ProperStrand	2	chr10	23505152	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-inf
chr1	12658227	12658251	lincRNA	Gm17644	exon	ENSMUSG00000066918	NonProperStrand	37	chr18	32405206	32405222	protein_coding	Ercc3	exon	ENSMUSG00000024382	ProperStrand	280	1	-11.2011
chr12	33638595	33638614	lincRNA	4933406C10Rik	exon	ENSMUSG00000086543	ProperStrand	52	chr1	89673606	89673696	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-3.5254
chr4	124420958	124423327	protein_coding	Inpp5b	exon	ENSMUSG00000028894	ProperStrand	9	chr11	62416606	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-14.4387
chr19	6359193	6359211	antisense	Gm14966	.	ENSMUSG00000079467	ProperStrand	3	chr5	121655100	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-9.9796
chr6	149278183	149278210	protein_coding	2810474O19Rik	exon	ENSMUSG00000032712	ProperStrand	70	chr12	17552949	17553072	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-4.7913
chr1	88253222	88253240	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chr9	53374920	53375093	protein_coding	Npat	exon	ENSMUSG00000033054	ProperStrand	20	7	-19.9097
chr16	92311157	92311178	protein_coding	Fam165b	exon	ENSMUSG00000051989	ProperStrand	4	chr7	152118581	152118597	protein_coding	Ccnd1	exon	ENSMUSG00000070348	ProperStrand	93	1	-17.9098
chr4	89361221	89361238	protein_coding	Dmrta1	utr3	ENSMUSG00000043753	NonProperStrand	4	chr4	131908357	131908440	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-11.0940
chr1	180595539	180595558	protein_coding	Kif26b	intron	ENSMUSG00000026494	NonProperStrand	14	chr7	149170855	149171340	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	1	-14.2181
chr2	153050783	153050799	protein_coding	Tspyl3	exon	ENSMUSG00000074671	ProperStrand	228	chr15	98350159	98350203	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-2.3285
chr2	135631603	135631683	protein_coding	Plcb4	intron	ENSMUSG00000039943	NonProperStrand	57	chr2	135632319	135632409	protein_coding	Plcb4	intron	ENSMUSG00000039943	ProperStrand	50	1	-13.7808
chr2	90235298	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	79518183	79518226	tRNA	tRNA550-ThrCGT	.	1091877	ProperStrand	21	1	-6.5250
chr14	59820369	59820400	protein_coding	Rcbtb1	utr5	ENSMUSG00000035469	ProperStrand	39	chr5	111121066	111121163	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-7.2916
chr6	87930870	87930906	protein_coding	H1fx	exon	ENSMUSG00000044927	ProperStrand	13	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-10.0820
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr2	66453175	66453191	protein_coding	Scn9a	intron	ENSMUSG00000075316	NonProperStrand	4	1	-13.4066
chr16	13784192	13788930	protein_coding	Rrn3	exon	ENSMUSG00000022682	ProperStrand	58	chr19	8963084	8963164	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-6.2520
chr11	43030037	43032407	antisense	Gm12146	.	ENSMUSG00000085533	ProperStrand	1	chr17	35299525	35299642	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-inf
chr17	45704140	45704156	protein_coding	Slc35b2	exon	ENSMUSG00000037089	ProperStrand	55	chr10	23505152	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.3541
chr13	114052057	114052147	SINE	B1_Mus2	Alu	chr13B1_Mus2114052046	ProperStrand	1	chr14	12695799	12695889	protein_coding	Ptprg	intron	ENSMUSG00000021745	ProperStrand	72	1	-inf
chr1	88247766	88247856	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	chr8	32260340	32260420	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	19	-6.5586
chr9	65677815	65677831	SINE	PB1D9	Alu	chr9PB1D965677792	NonProperStrand	5	chr2	32818884	32818941	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-10.5887
chr2	121062062	121062117	protein_coding	Trp53bp1	exon	ENSMUSG00000043909	ProperStrand	45	chr12	88778631	88778666	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-7.0694
chr17	65061734	65061759	protein_coding	Man2a1	exon	ENSMUSG00000024085	ProperStrand	20	chr5	125077278	125077294	protein_coding	Tctn2	utr3	ENSMUSG00000029386	NonProperStrand	22	1	-17.5303
chrX	39029535	39029551	protein_coding	Gria3	utr3	ENSMUSG00000001986	ProperStrand	32	chr6	124648870	124648887	protein_coding	Lpcat3	intron	ENSMUSG00000004270	ProperStrand	19	1	-16.8581
chr9	15119646	15119768	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	chr15	98356818	98356913	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	8	-1.2546
chr4	115484059	115484084	protein_coding	Atpaf1	utr3	ENSMUSG00000028710	ProperStrand	202	chr8	129468746	129468872	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-2.2274
chr11	79950546	79950563	protein_coding	1110002N22Rik	utr3	ENSMUSG00000046909	ProperStrand	45	chr19	8847318	8847365	protein_coding	Tmem179b	intron	ENSMUSG00000079437	ProperStrand	1	1	-inf
chr6	38461893	38461909	protein_coding	Ubn2	utr3	ENSMUSG00000038538	ProperStrand	86	chr4	8791364	8791431	protein_coding	Chd7	exon	ENSMUSG00000041235	ProperStrand	80	1	-12.0115
chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr11	96112970	96112987	protein_coding	Gm53	exon	ENSMUSG00000078706	NonProperStrand	16	1	-9.1173
chr7	29605184	29605274	protein_coding	Hnrnpl	exon	ENSMUSG00000015165	ProperStrand	150	chr1	174249478	174249516	protein_coding	Igsf8	exon	ENSMUSG00000038034	ProperStrand	25	1	-13.2487
chr16	13813783	13813849	protein_coding	Rrn3	utr3	ENSMUSG00000022682	ProperStrand	58	chr10	23770362	23770378	protein_coding	Taar7f	exon	ENSMUSG00000060825	NonProperStrand	40	1	-14.2071
chr15	8181184	8181200	protein_coding	2410089E03Rik	exon	ENSMUSG00000039801	ProperStrand	43	chr12	55797800	55797932	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	3	-18.8808
chr12	60235136	60235180	snoRNA	ENSMUSG00000077505_SNORA26	.	ENSMUSG00000077505	ProperStrand	82	chr5	74489579	74489631	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	2	-5.4991
chr11	98018491	98018541	protein_coding	Med1	exon	ENSMUSG00000018160	ProperStrand	23	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-8.8513
chr7	63340457	63340514	protein_coding	Herc2	exon	ENSMUSG00000030451	ProperStrand	66	chr7	117166722	117166812	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	8	-19.4691
chr5	136223361	136223377	protein_coding	Styxl1	utr3	ENSMUSG00000019178	ProperStrand	14	chr1	92689231	92689255	protein_coding	Col6a3	intron	ENSMUSG00000048126	ProperStrand	79	1	-15.7527
chr4	149022658	149022696	protein_coding	Clstn1	utr3	ENSMUSG00000039953	ProperStrand	173	chr11	30676355	30676398	protein_coding	Psme4	intron	ENSMUSG00000040850	ProperStrand	40	2	-19.5666
chr10	77069409	77069464	protein_coding	Sumo3	utr5	ENSMUSG00000020265	ProperStrand	31	chr2	26494761	26494796	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	3	-10.5082
chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	chr8	97433514	97433536	protein_coding	Ccdc102a	intron	ENSMUSG00000063605	ProperStrand	11	1	-13.3386
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr13	51743579	51743662	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-1.2084
chr4	149150962	149151049	antisense	Gm16188	.	ENSMUSG00000085368	NonProperStrand	1	chr7	117189991	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-inf
chr9	61253669	61253721	protein_coding-noncoding	Tle3	utr5	ENSMUSG00000032280	ProperStrand	9	chr7	19767747	19770202	protein_coding	Eml2	exon	ENSMUSG00000040811	ProperStrand	33	9	-inf
chr8	27091218	27091234	protein_coding	4930444A02Rik	utr3	ENSMUSG00000037251	NonProperStrand	57	chr19	37084164	37084215	protein_coding	Btaf1	exon	ENSMUSG00000040565	ProperStrand	23	1	-15.3338
chr1	152268927	152269668	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	2	-7.6169
chr16	15736748	15736766	protein_coding	Prkdc	intron	ENSMUSG00000022672	NonProperStrand	24	chr5	108334208	108334260	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-6.6252
chr2	90235286	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	11867679	11870432	protein_coding	Grb10	exon	ENSMUSG00000020176	NonProperStrand	159	1	-2.6762
chr4	43505814	43505904	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr13	55104935	55104967	protein_coding	Unc5a	exon	ENSMUSG00000025876	ProperStrand	19	17	-inf
chr10	127020511	127020887	protein_coding	Lrp1	exon	ENSMUSG00000040249	NonProperStrand	24	chr11	120207168	120207226	protein_coding	Actg1	utr3	ENSMUSG00000062825	ProperStrand	178	1	-12.9860
chr17	57161617	57161679	protein_coding	Khsrp	utr3	ENSMUSG00000007670	ProperStrand	353	chr19	8800458	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-0.7686
chr3	122687469	122687486	Simple_repeat	(CCCCG)n	Simple_repeat	chr3(CCCCG)n122687470	NonProperStrand	2	chr1	71648958	71649002	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	1	-15.3008
chr13	23713798	23713891	protein_coding	Hist1h1e	exon	ENSMUSG00000051627	ProperStrand	41	chr13	49779765	49779804	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-7.7738
chr7	31012624	31016149	protein_coding	Tbcb	exon	ENSMUSG00000006095	ProperStrand	5	chr7	118219574	118219602	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-9.2324
chr16	11480954	11480996	protein_coding	Snx29	intron	ENSMUSG00000071669	ProperStrand	10	chr3	68889025	68889140	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-6.7595
chrX	13269163	13269180	protein_coding	Cask	intron	ENSMUSG00000031012	ProperStrand	41	chr1	162966813	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-7.0149
chr18	35098353	35098610	protein_coding	Hspa9	exon	ENSMUSG00000024359	ProperStrand	166	chr7	82854623	82854642	protein_coding	Akap13	intron	ENSMUSG00000066406	ProperStrand	80	1	-10.6930
chr9	43856545	43856573	protein_coding	Thy1	utr3	ENSMUSG00000032011	ProperStrand	8	chr5	39112185	39112202	protein_coding	Clnk	exon	ENSMUSG00000039315	ProperStrand	4	1	-19.5686
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chrX	93363622	93363722	protein_coding	Msn	utr3	ENSMUSG00000031207	ProperStrand	71	1	-5.5736
chr19	45409733	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr2	130101985	130102087	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	2	-2.5084
chr2	121176333	121176349	protein_coding	Ppip5k1	exon	ENSMUSG00000033526	ProperStrand	85	chr13	29045044	29045063	protein_coding	Sox4	utr5	ENSMUSG00000076431	ProperStrand	73	1	-12.2189
chr5	72660686	72668394	lincRNA	Atp10d	exon	ENSMUSG00000046808	ProperStrand	13	chr17	24665421	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-7.9975
chr5	121074592	121074704	protein_coding	Ddx54	exon	ENSMUSG00000029599	ProperStrand	104	chr4	131908356	131908404	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.7213
chr3	96362878	96362999	lincRNA	Gm15441	intron	ENSMUSG00000074398	ProperStrand	24	chr11	69266813	69267278	protein_coding	Dnahc2	exon	ENSMUSG00000005237	ProperStrand	95	1	-14.2461
chr9	95719557	95719574	protein_coding	Pls1	intron	ENSMUSG00000049493	NonProperStrand	5	chr15	34370631	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-8.5662
chr11	4077604	4078134	protein_coding	Sf3a1	exon	ENSMUSG00000002129	ProperStrand	78	chr4	131908809	131908899	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.8889
chr10	79608228	79608318	protein_coding	Atp5d	utr3	ENSMUSG00000003072	ProperStrand	44	chr11	69481368	69481448	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.7716
chr17	32453268	32453285	protein_coding	Akap8	exon	ENSMUSG00000024045	ProperStrand	339	chr6	89266618	89266744	protein_coding	Plxna1	utr3	ENSMUSG00000030084	ProperStrand	233	3	-16.1260
chr11	62416599	62416615	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	chr5	147646752	147646797	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	1	-0.7260
chr3	104605750	104605830	protein_coding	Mov10	exon	ENSMUSG00000002227	ProperStrand	96	chr16	30514154	30514171	protein_coding	Tmem44	utr3	ENSMUSG00000022537	ProperStrand	217	2	-15.4530
chr2	76471660	76471676	protein_coding	Prkra	exon	ENSMUSG00000002731	NonProperStrand	65	chr16	23111448	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-2.2409
chr16	38450447	38450507	protein_coding	Adprh	exon	ENSMUSG00000002844	ProperStrand	30	chr17	34089039	34089197	protein_coding	Rps18	exon	ENSMUSG00000008668	ProperStrand	111	6	-inf
chr9	53664788	53664805	protein_coding	Slc35f2	utr3	ENSMUSG00000042195	ProperStrand	65	chr13	49779672	49779741	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-6.8545
chr17	32629754	32629844	protein_coding	Cyp4f39	utr3	ENSMUSG00000061126	ProperStrand	4	chr9	15119666	15119746	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-8.0470
chr12	82317769	82317785	protein_coding	Slc8a3	exon	ENSMUSG00000079055	ProperStrand	126	chr9	65044378	65044407	snRNA	ENSMUSG00000075763_U5	.	ENSMUSG00000075763	ProperStrand	216	1	-9.2566
chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-4.0622
chr7	29192298	29192534	protein_coding	Samd4b	exon	ENSMUSG00000037513	ProperStrand	72	chr3	123210854	123210910	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.7766
chr8	11613320	11613378	protein_coding	Ankrd10	intron	ENSMUSG00000031508	ProperStrand	32	chr1	89673687	89673777	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	6	-inf
chr5	108334198	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	chr9	15118519	15118539	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	3	-4.0653
chr10	82828485	82828502	protein_coding	D10Wsu102e	exon	ENSMUSG00000020255	ProperStrand	42	chr5	54389948	54389964	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	1	-11.5011
chr10	104351987	104352007	Other	RMER1A	Other	chr10RMER1A104351322	ProperStrand	15	chr9	102505239	102505287	protein_coding	Cep63	exon	ENSMUSG00000032534	ProperStrand	23	1	-17.8173
chr2	78737144	78753920	protein_coding	Ube2e3	exon	ENSMUSG00000027011	ProperStrand	8	chr16	23110874	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-8.6552
chr11	120819249	120819271	protein_coding	Slc16a3	exon	ENSMUSG00000025161	ProperStrand	98	chr3	123210883	123210924	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.3215
chr1	77501414	77501494	protein_coding	Epha4	intron	ENSMUSG00000026235	ProperStrand	57	chr16	23111384	23111474	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.3302
chr11	100182124	100182290	protein_coding	Eif1	exon	ENSMUSG00000035530	ProperStrand	115	chr1	162965544	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-3.8458
chr1	88247765	88247880	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	chr17	35089181	35089210	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	6	-0.9600
chr11	70051979	70051995	protein_coding	Rnasek	intron	ENSMUSG00000040904	ProperStrand	7	chr11	69483182	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-6.6014
chr1	162968443	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	chr19	8963032	8963048	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-3.0899
chr6	134029351	134029368	protein_coding	Etv6	intron	ENSMUSG00000030199	ProperStrand	46	chr12	100434852	100434902	protein_coding	Foxn3	exon	ENSMUSG00000033713	ProperStrand	74	1	-13.4299
chr2	76471660	76471676	protein_coding	Prkra	exon	ENSMUSG00000002731	NonProperStrand	65	chr9	106594590	106594631	protein_coding	Rad54l2	utr3	ENSMUSG00000040661	ProperStrand	51	1	-13.4829
chr17	65929974	65929990	protein_coding	Vapa	utr3	ENSMUSG00000024091	ProperStrand	24	chr5	115939537	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-9.7124
chr8	106976637	106976653	protein_coding	Ccdc79	exon	ENSMUSG00000052616	NonProperStrand	57	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-7.8420
chrX	53609291	53609309	protein_coding	Zfp449	intron	ENSMUSG00000073176	NonProperStrand	7	chr16	23110459	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-10.9180
chr4	151433407	151433423	protein_coding	Nol9	utr3	ENSMUSG00000028948	ProperStrand	93	chr5	108336376	108336411	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-4.0453
chr3	107255715	107255815	protein_coding	Kcnc4	intron	ENSMUSG00000027895	ProperStrand	4	chr4	131908688	131908740	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-6.2660
chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	chr11	33060116	33060148	protein_coding	Npm1	intron	ENSMUSG00000057113	ProperStrand	352	1	-6.5519
chr5	115597212	115597229	protein_coding	Mlec	utr3	ENSMUSG00000048578	NonProperStrand	25	chr15	82980086	82980171	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-8.8985
chr4	136541512	136541578	protein_coding	Zbtb40	intron	ENSMUSG00000060862	ProperStrand	33	chr11	69483136	69483195	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.5168
chr17	66468411	66468427	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	chr4	122968584	122968660	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	2	-5.1801
chr11	29445982	29446012	protein_coding	Rps27a	exon	ENSMUSG00000020460	ProperStrand	47	chr10	23505190	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-2.9598
chr2	90235315	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	143400749	143401405	protein_coding	Gm13084	exon	ENSMUSG00000059218	ProperStrand	5	2	-15.4562
chr11	51007774	51007884	lincRNA	5133400J02Rik	intron	ENSMUSG00000086646	ProperStrand	10	chr1	138166838	138166876	protein_coding	Camsap2	utr3	ENSMUSG00000041570	ProperStrand	19	8	-20.1173
chr1	138054105	138054915	protein_coding	Kif21b	exon	ENSMUSG00000041642	ProperStrand	77	chr1	63225679	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-6.1751
chr10	87892266	87892282	protein_coding	Gnptab	exon	ENSMUSG00000035311	ProperStrand	65	chr7	150717350	150717425	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-5.3505
chr8	91106344	91106360	protein_coding	Nkd1	intron	ENSMUSG00000031661	ProperStrand	57	chr2	32047046	32047100	protein_coding	Prrc2b	exon	ENSMUSG00000039262	ProperStrand	344	1	-9.9176
chr5	104773832	104773922	LINE	L3	CR1	chr5L3104773858	ProperStrand	1	chr5	104773519	104773609	SINE	B3	B2	chr5B3104773499	ProperStrand	1	1	-inf
chr1	162968481	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	chr14	52829478	52829569	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	5	-7.9982
chr15	95724971	95743825	protein_coding	Ano6	exon	ENSMUSG00000064210	ProperStrand	39	chr9	15119300	15119380	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-5.9528
chr16	35404154	35407804	protein_coding	Pdia5	exon	ENSMUSG00000022844	ProperStrand	26	chr16	23110977	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.2392
chr13	23647407	23647438	protein_coding	Hist1h1d	exon	ENSMUSG00000052565	ProperStrand	78	chr8	129468746	129468816	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-3.9177
chr14	62058651	62058668	protein_coding	Kpna3	utr5	ENSMUSG00000021929	ProperStrand	14	chr17	24857726	24857785	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.9973
chr3	85931035	85931083	protein_coding	Sh3d19	utr3	ENSMUSG00000028082	ProperStrand	58	chr9	15130707	15130757	snoRNA	ENSMUSG00000077506_Scarna9	.	ENSMUSG00000077506	ProperStrand	148	1	-11.5695
chr13	13450503	13450519	protein_coding	Gpr137b	utr3	ENSMUSG00000021306	NonProperStrand	3	chr8	73419657	73419712	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-9.3031
chr15	66797508	66797526	protein_coding	Ndrg1	intron	ENSMUSG00000005125	ProperStrand	35	chr16	23110940	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.8578
chr8	34764521	34764539	protein_coding	Gsr	intron	ENSMUSG00000031584	ProperStrand	18	chr3	101380423	101380440	protein_coding	Atp1a1	utr3	ENSMUSG00000033161	ProperStrand	316	1	-12.4280
chr10	76515584	76515657	protein_coding	Col18a1	utr3	ENSMUSG00000001435	ProperStrand	287	chr12	21273916	21274006	protein_coding	Asap2	utr3	ENSMUSG00000052632	ProperStrand	45	1	-10.7559
chr4	53873627	53873652	protein_coding	Tmem38b	utr3	ENSMUSG00000028420	ProperStrand	22	chr15	34370580	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-5.4759
chr17	56219191	56238743	protein_coding	Hdgfrp2	exon	ENSMUSG00000002833	ProperStrand	36	chr7	116663634	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	5	-14.8067
chr9	109796313	109796346	protein_coding	Cdc25a	utr3	ENSMUSG00000032477	ProperStrand	27	chr2	26494749	26494839	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.6040
chr17	39985355	39985408	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr11	69482352	69482386	snoRNA	ENSMUSG00000089542_snoU6-77	.	ENSMUSG00000089542	ProperStrand	138	3	-10.3736
chr2	91736693	91736749	protein_coding	Ambra1	intron	ENSMUSG00000040506	NonProperStrand	6	chr4	131865853	131865953	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	NonProperStrand	39	1	-18.1220
chr17	35138505	35138647	protein_coding	Vars	exon	ENSMUSG00000007029	ProperStrand	121	chr18	42805538	42805554	protein_coding	Ppp2r2b	exon	ENSMUSG00000024500	NonProperStrand	95	1	-10.9811
chr1	133252343	133252452	protein_coding	Srgap2	intron	ENSMUSG00000026425	ProperStrand	299	chr7	116663633	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-0.8729
chr17	35296083	35296145	protein_coding	Prrc2a	exon	ENSMUSG00000024393	ProperStrand	315	chr1	162965993	162966041	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-0.9473
chr18	10067647	10067664	protein_coding	Rock1	exon	ENSMUSG00000024290	NonProperStrand	22	chr4	131908689	131908791	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-7.4295
chr9	65049531	65049558	snRNA	ENSMUSG00000075930_U5	.	ENSMUSG00000075930	ProperStrand	175	chr7	117189909	117189999	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-2.8718
chr8	62180465	62180481	LINE	Lx3C	L1	chr8Lx3C62179602	ProperStrand	1	chr19	41992310	41992361	protein_coding	Pgam1	utr3	ENSMUSG00000011752	ProperStrand	124	1	-inf
chr15	88996890	88996916	protein_coding	Plxnb2	exon	ENSMUSG00000036606	ProperStrand	119	chr10	23505152	23505248	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-2.7607
chr18	42697637	42697698	protein_coding	Tcerg1	exon	ENSMUSG00000024498	ProperStrand	210	chr2	26451868	26451884	protein_coding	Gm20532	intron	ENSMUSG00000092356	ProperStrand	46	1	-11.3365
chr13	70735212	70747710	protein_coding	BC018507	exon	ENSMUSG00000034525	ProperStrand	43	chr7	116663644	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-7.9048
chr4	124531873	124531908	protein_coding	Yrdc	utr3	ENSMUSG00000028889	ProperStrand	13	chr2	26080429	26080746	protein_coding	Qsox2	utr5	ENSMUSG00000036327	ProperStrand	24	4	-inf
chr9	21725638	21725656	protein_coding	Tmem205	exon	ENSMUSG00000040883	ProperStrand	8	chr2	166890502	166890556	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	3	-19.1095
chr7	28146782	28146798	protein_coding	Spnb4	exon	ENSMUSG00000011751	NonProperStrand	84	chr7	134110716	134111233	protein_coding	Sez6l2	exon	ENSMUSG00000030683	ProperStrand	94	2	-18.4580
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr18	67448886	67448976	protein_coding	Impa2	utr5	ENSMUSG00000024525	ProperStrand	31	2	-12.3241
chr4	138904657	138904747	protein_coding	Mrto4	intron	ENSMUSG00000028741	ProperStrand	40	chr8	98269959	98270035	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-6.3406
chr4	18020485	18020501	protein_coding	Mmp16	exon	ENSMUSG00000028226	ProperStrand	55	chr5	138609085	138609133	protein_coding	Mcm7	exon	ENSMUSG00000029730	ProperStrand	258	1	-10.5642
chr15	99846568	99846616	protein_coding	Larp4	utr3	ENSMUSG00000023025	ProperStrand	41	chr18	35714182	35714272	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.1545
chr9	21216518	21216692	protein_coding	Qtrt1	exon	ENSMUSG00000002825	ProperStrand	3	chr4	91012543	91012564	protein_coding	Elavl2	intron	ENSMUSG00000008489	ProperStrand	52	1	-inf
chr6	83111671	83111687	protein_coding	1700003E16Rik	exon	ENSMUSG00000030030	ProperStrand	352	chr18	73693118	73693135	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-2.2645
chr8	95351593	95351620	protein_coding	Mmp2	exon	ENSMUSG00000031740	ProperStrand	42	chr11	63885336	63887052	protein_coding	Cox10	exon	ENSMUSG00000042148	NonProperStrand	187	1	-11.7528
chr2	90235290	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	114260511	114260527	protein_coding	Slc6a1	exon	ENSMUSG00000030310	NonProperStrand	147	1	-2.8129
chr4	117930096	117930156	protein_coding	Ptprf	exon	ENSMUSG00000033295	ProperStrand	337	chr7	16534823	16534839	protein_coding	Ehd2	utr3	ENSMUSG00000074364	NonProperStrand	197	1	-7.4819
chr5	54389949	54389967	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	chr5	147646411	147646477	snoRNA	ENSMUSG00000077185_SNORD102	.	ENSMUSG00000077185	ProperStrand	142	4	-20.6105
chr18	53468469	53468485	protein_coding	Snx24	intron	ENSMUSG00000024535	NonProperStrand	14	chr9	64022855	64022898	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-10.9799
chr12	74320032	74373403	protein_coding	Mnat1	exon	ENSMUSG00000021103	ProperStrand	5	chr9	15118323	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-8.4764
chr8	13416895	13416912	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr11	78150285	78150301	protein_coding	Pigs	exon	ENSMUSG00000041958	NonProperStrand	138	1	-4.8284
chr8	72334599	72334615	protein_coding	Gmip	exon	ENSMUSG00000036246	ProperStrand	102	chr5	121655126	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.7868
chrX	147020580	147020670	protein_coding-noncoding	Apex2	utr3	ENSMUSG00000025269	ProperStrand	1	chrX	147020693	147020773	protein_coding	Apex2	intron	ENSMUSG00000025269	ProperStrand	8	1	-inf
chr11	102170715	102170761	protein_coding	Ubtf	exon	ENSMUSG00000020923	ProperStrand	66	chr18	35716832	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-5.5536
chr14	52628198	52628288	protein_coding	Zfp219	exon	ENSMUSG00000049295	ProperStrand	27	chr7	29136545	29136625	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.7994
chr11	51414697	51414716	protein_coding	Agxt2l2	utr3	ENSMUSG00000020359	ProperStrand	4	chr10	23505152	23505238	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-6.2798
chr2	80385164	80385254	protein_coding	Nckap1	exon	ENSMUSG00000027002	ProperStrand	21	chr10	110918562	110918642	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-5.4616
chr9	46534675	46534765	DNA	MER44C	MER2_type	chr9MER44C46534474	ProperStrand	1	chr9	46534789	46534869	DNA	MER44C	MER2_type	chr9MER44C46534782	ProperStrand	1	1	-inf
chr17	94368693	94368710	LTR	RMER4B	ERVK	chr17RMER4B94368314	ProperStrand	2	chr17	35088957	35089004	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	2	-inf
chr2	155213637	155213679	protein_coding	Trp53inp2	utr3	ENSMUSG00000038375	ProperStrand	12	chr4	131908796	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.9639
chr12	3968611	3968627	protein_coding	Efr3b	exon	ENSMUSG00000020658	ProperStrand	142	chr17	24665420	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-3.3204
chr15	10393733	10400033	protein_coding	Dnajc21	exon	ENSMUSG00000044224	NonProperStrand	3	chr12	17552949	17553030	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-11.3963
chr8	13416897	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr9	64026128	64026228	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	1	-2.1487
mmu-miR-1949	2	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr9	22163184	22164894	protein_coding	Anln	exon	ENSMUSG00000036777	ProperStrand	133	2	-10.6027
chr11	58768279	58768345	protein_coding	Hist3h2a	exon	ENSMUSG00000078851	ProperStrand	67	chr1	89673634	89673724	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-3.0642
chr11	78085443	78103744	protein_coding	2610507B11Rik	exon	ENSMUSG00000010277	ProperStrand	246	chr9	120038561	120038673	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	16	-19.5143
chr11	98556961	98556991	protein_coding	Psmd3	utr3	ENSMUSG00000017221	ProperStrand	51	chr14	45949538	45949554	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	2	-16.1784
chr9	49201473	49201490	protein_coding	Drd2	intron	ENSMUSG00000032259	ProperStrand	8	chr5	74489577	74489667	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	3	-17.6375
chr4	85016349	85016365	protein_coding	Sh3gl2	intron	ENSMUSG00000028488	NonProperStrand	313	chr8	44222723	44222765	protein_coding	Triml1	intron	ENSMUSG00000031651	ProperStrand	12	1	-13.2888
chr11	87240289	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	chr7	116664821	116664913	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-2.7948
chr2	25563070	25563086	antisense	A230005M16Rik	.	ENSMUSG00000087612	ProperStrand	103	chr5	54389947	54389965	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	2	-15.3095
chr11	60606536	60624600	protein_coding	Shmt1	exon	ENSMUSG00000020534	ProperStrand	60	chr4	131865855	131865980	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-3.2523
chr9	119147909	119147999	protein_coding	Oxsr1	utr3	ENSMUSG00000036737	ProperStrand	33	chr4	131908264	131908344	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.3621
chr2	158185554	158185644	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr8	129468755	129468835	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	5	-0.9207
chr2	103897182	103897221	protein_coding	Fbxo3	utr3	ENSMUSG00000027180	ProperStrand	12	chr7	116663636	116663726	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-5.5543
chr7	125297903	125298129	protein_coding	Smg1	exon	ENSMUSG00000030655	ProperStrand	70	chr15	5068442	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-5.7640
chr16	23110454	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	chr3	153574605	153574655	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	6	-3.4338
chr2	121751434	121759263	protein_coding	Casc4	exon	ENSMUSG00000060227	ProperStrand	18	chrX	71517831	71517921	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-8.9682
chr5	145497634	145497651	protein_coding	Tmem130	utr3	ENSMUSG00000043388	ProperStrand	26	chr10	23505152	23505204	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.5465
chr11	77806502	77806577	protein_coding	Phf12	intron	ENSMUSG00000037791	ProperStrand	21	chr19	8800377	8800467	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-5.5479
chr2	155816552	155816652	protein_coding	Cep250	exon	ENSMUSG00000038241	ProperStrand	8	chr18	35716810	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-5.9895
chr18	65292147	65292164	protein_coding	Nedd4l	intron	ENSMUSG00000024589	ProperStrand	44	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-9.2161
chr18	35741651	35741704	protein_coding	Matr3	exon	ENSMUSG00000037236	ProperStrand	90	chr10	23505190	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-0.7341
mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr15	59197739	59197755	protein_coding	E430025E21Rik	exon	ENSMUSG00000022350	NonProperStrand	10	1	-9.5334
chr11	60282160	60282192	protein_coding	Drg2	utr3	ENSMUSG00000020537	ProperStrand	13	chr4	131908754	131908795	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-6.5299
chr7	138533559	138533649	protein_coding	Ikzf5	utr3	ENSMUSG00000040167	ProperStrand	6	chr11	69481401	69481481	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-7.7824
chr2	34761099	34761116	protein_coding	Phf19	exon	ENSMUSG00000026873	ProperStrand	8	chr4	116827120	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-11.1619
chr12	8798102	8798192	protein_coding	Sdc1	exon	ENSMUSG00000020592	ProperStrand	15	chr11	69481356	69481436	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.8683
chr7	29136525	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	chr1	9932550	9932626	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	11	-1.9459
chr11	97944577	97956477	protein_coding	Fbxl20	exon	ENSMUSG00000020883	ProperStrand	23	chr16	23110916	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.7108
chr6	124652590	124653109	protein_coding	Lpcat3	exon	ENSMUSG00000004270	ProperStrand	19	chr1	162965984	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-5.8254
chr10	127816620	127817652	protein_coding	Ankrd52	exon	ENSMUSG00000014498	ProperStrand	26	chr18	82670180	82691443	protein_coding	Mbp	exon	ENSMUSG00000041607	ProperStrand	11	1	-18.3399
chr3	88359869	88360633	protein_coding	Ubqln4	exon	ENSMUSG00000008604	ProperStrand	49	chr16	23111452	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.5489
chr4	53015201	53015217	SINE	B1F1	Alu	chr4B1F153015138	ProperStrand	102	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-7.8661
chr9	109236146	109236165	protein_coding	Fbxw28	intron	ENSMUSG00000079284	NonProperStrand	1	chr1	72290864	72290972	snRNA	ENSMUSG00000093111_AC120136.1	.	ENSMUSG00000093111	ProperStrand	137	1	-inf
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr15	98350146	98350283	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	10	-16.2652
chr7	52309977	52309993	protein_coding	Prrg2	exon	ENSMUSG00000007837	NonProperStrand	281	chr17	27699580	27699619	protein_coding	Hmga1	utr3	ENSMUSG00000046711	ProperStrand	180	1	-8.0215
chr5	34693915	34693972	protein_coding	Rnf4	exon	ENSMUSG00000029110	ProperStrand	27	chr11	69483190	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.8930
chr19	8788100	8788116	protein_coding	Slc3a2	exon	ENSMUSG00000010095	ProperStrand	63	chr6	88040201	88040234	protein_coding	Rpn1	exon	ENSMUSG00000030062	ProperStrand	58	1	-13.2875
chr16	85802546	85802564	protein_coding	Adamts1	exon	ENSMUSG00000022893	ProperStrand	102	chr8	125741087	125741105	protein_coding	4732415M23Rik	intron	ENSMUSG00000048478	ProperStrand	88	1	-11.4773
chr1	173080946	173080964	protein_coding	Mpz	intron	ENSMUSG00000056569	NonProperStrand	2	chr3	123210907	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-9.1566
chr8	74126379	74126468	protein_coding	Fam129c	exon	ENSMUSG00000043243	ProperStrand	4	chr18	35714144	35714260	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	3	-inf
chr5	147646646	147647177	protein_coding	Rpl21	exon	ENSMUSG00000041453	ProperStrand	112	chr4	131865913	131865940	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-2.9689
chr9	120864581	120864639	protein_coding	Ctnnb1	exon	ENSMUSG00000006932	ProperStrand	214	chr1	133252344	133252379	protein_coding	Srgap2	intron	ENSMUSG00000026425	ProperStrand	299	2	-12.0876
chr13	23647190	23647245	protein_coding	Hist1h1d	exon	ENSMUSG00000052565	ProperStrand	78	chr3	95980324	95980410	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	2	-10.2644
chr8	96999676	96999692	lincRNA	Nlrc5	exon	ENSMUSG00000074151	NonProperStrand	25	chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	1	-14.3355
chr2	90235314	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	11427556	11427572	protein_coding	Col4a2	exon	ENSMUSG00000031503	ProperStrand	74	1	-4.0648
chr5	113717256	113717275	protein_coding	Sgsm1	intron	ENSMUSG00000042216	ProperStrand	20	chr11	55296278	55296330	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-8.3823
chr13	73936429	73937090	protein_coding	Slc12a7	exon	ENSMUSG00000017756	ProperStrand	80	chr4	122968593	122968673	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-5.7151
chr4	137068078	137068134	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	chr8	127363646	127363746	protein_coding	2810004N23Rik	utr3	ENSMUSG00000031984	ProperStrand	22	1	-10.1303
chr13	44964973	44965036	protein_coding	Jarid2	intron	ENSMUSG00000038518	ProperStrand	372	chr4	116826699	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	NonProperStrand	2	1	-17.2335
chr15	37949219	37949246	protein_coding	Ubr5	exon	ENSMUSG00000037487	ProperStrand	258	chr12	88778632	88778722	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-3.6900
chrX	99382697	99382787	protein_coding	Rps4x	exon	ENSMUSG00000031320	ProperStrand	139	chr17	24857717	24857797	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.0424
chr16	93762816	93762897	protein_coding	Dopey2	exon	ENSMUSG00000022946	ProperStrand	22	chr9	15119976	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-9.2732
chr2	158425434	158425450	lincRNA	Gm14204	exon	ENSMUSG00000086496	NonProperStrand	6	chr10	23505151	23505268	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-5.3874
chrX	58687104	58687180	LTR	MTEa	MaLR	chrXMTEa58687117	ProperStrand	2	chr8	30085462	30085483	protein_coding	Unc5d	intron	ENSMUSG00000063626	ProperStrand	22	1	-inf
chr11	77969096	77969140	protein_coding	BC017647	utr3	ENSMUSG00000037750	ProperStrand	19	chrX	99445995	99446012	protein_coding	Cited1	utr5	ENSMUSG00000051159	ProperStrand	72	1	-15.2848
chr3	41397873	41400556	protein_coding	Phf17	exon	ENSMUSG00000025764	ProperStrand	101	chr7	138277354	138277371	protein_coding	Fgfr2	intron	ENSMUSG00000030849	NonProperStrand	95	1	-11.3435
chr7	152494045	152494062	protein_coding	Mrgprf	exon	ENSMUSG00000031070	NonProperStrand	6	chr1	88247742	88247875	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	2	-15.7480
chr7	30044247	30044307	protein_coding	Spint2	intron	ENSMUSG00000074227	ProperStrand	82	chr4	131908236	131908297	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.9981
chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr5	130295414	130295548	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	20	-1.4073
chr11	4074053	4074109	protein_coding	Sf3a1	exon	ENSMUSG00000002129	ProperStrand	78	chr7	148634784	148634835	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	3	-8.6980
chr1	162860426	162868283	protein_coding	Rc3h1	exon	ENSMUSG00000040423	ProperStrand	13	chr4	131908714	131908794	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.8088
chr5	137511103	137511149	protein_coding	Ap1s1	utr3	ENSMUSG00000004849	ProperStrand	16	chr4	131908236	131908353	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	6	-19.0971
chr14	47941804	47941892	protein_coding	Mapk1ip1l	utr3	ENSMUSG00000021840	ProperStrand	34	chr4	131908718	131908858	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-7.9837
chr6	28778824	28778841	protein_coding	Lrrc4	utr3	ENSMUSG00000049939	ProperStrand	9	chr2	17963330	17963347	protein_coding	2810030E01Rik	intron	ENSMUSG00000054074	ProperStrand	15	1	-19.5214
chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr2	26494706	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	9	-3.3088
chr2	130977089	130977179	protein_coding	1700037H04Rik	intron	ENSMUSG00000027327	ProperStrand	18	chr2	130102043	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-7.7579
chr3	133129874	133129964	protein_coding	Tet2	exon	ENSMUSG00000040943	ProperStrand	192	chr5	121655017	121655097	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-1.7419
chr4	43505704	43505794	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr10	73251821	73251839	protein_coding	Pcdh15	intron	ENSMUSG00000052613	ProperStrand	33	1	-4.1792
chr2	165662069	165662116	protein_coding	Zmynd8	intron	ENSMUSG00000039671	ProperStrand	81	chr14	64829132	64829149	protein_coding	Msra	intron	ENSMUSG00000054733	NonProperStrand	84	1	-12.0348
chr3	101618512	101618579	protein_coding	Mab21l3	utr3	ENSMUSG00000044313	ProperStrand	11	chr11	69481348	69481434	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	7	-inf
chr5	145532342	145532393	protein_coding	Trrap	intron	ENSMUSG00000045482	ProperStrand	399	chr19	8798507	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	4	-7.0120
chr17	27699525	27699625	protein_coding	Hmga1	utr3	ENSMUSG00000046711	ProperStrand	180	chr1	59761143	59761176	snoRNA	ENSMUSG00000089512_SNORD11	.	ENSMUSG00000089512	ProperStrand	43	1	-11.7816
chr19	8915861	8917535	protein_coding	Bscl2	exon	ENSMUSG00000071657	ProperStrand	6	chr4	131908360	131908440	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-5.6461
chr4	47416374	47418431	protein_coding	Tgfbr1	exon	ENSMUSG00000007613	ProperStrand	22	chr13	56962398	56962414	protein_coding	Trpc7	exon	ENSMUSG00000021541	ProperStrand	50	1	-15.7017
chr5	137339557	137339637	processed_transcript	Gm20485	.	ENSMUSG00000092402	ProperStrand	1	chr5	137339371	137339461	protein_coding	Emid2	intron	ENSMUSG00000004415	ProperStrand	8	1	-inf
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr7	52381722	52381798	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-3.3465
chr8	73223143	73223161	protein_coding	Jund	exon	ENSMUSG00000071076	ProperStrand	50	chr3	108357274	108357418	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-4.8910
chr2	35317940	35317975	protein_coding-noncoding	Ggta1	utr3	ENSMUSG00000035778	ProperStrand	1	chr3	55435951	55435967	protein_coding	Nbea	exon	ENSMUSG00000027799	NonProperStrand	115	1	-inf
chr17	13112450	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	chr7	52382233	52382315	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	8	-8.8500
chr1	171672053	171672070	protein_coding	Rgs4	utr3	ENSMUSG00000038530	ProperStrand	3	chr18	35714144	35714216	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-9.6483
chr10	60896533	60896558	protein_coding	Eif4ebp2	utr3	ENSMUSG00000020091	ProperStrand	39	chr8	129468746	129468876	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	3	-12.3324
chrX	45836397	45836416	protein_coding	Aifm1	exon	ENSMUSG00000036932	ProperStrand	14	chr5	108334196	108334279	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	2	-12.4410
chr10	22304621	22304711	LINE	L1Md_F2	L1	chr10L1Md_F222304055	ProperStrand	1	chr7	54443374	54443455	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-inf
chr10	24519013	24519065	protein_coding	Enpp3	exon	ENSMUSG00000019989	ProperStrand	6	chr11	20548012	20548029	protein_coding	Sertad2	exon	ENSMUSG00000049800	ProperStrand	21	1	-18.5896
chr2	93579834	93579915	protein_coding	Ext2	exon	ENSMUSG00000027198	ProperStrand	49	chr18	35716707	35716797	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.5106
chr7	24779190	24779213	SINE	ID_B1	B4	chr7ID_B124779183	NonProperStrand	54	chr1	155542651	155542668	protein_coding	Rgs8	utr3	ENSMUSG00000042671	NonProperStrand	12	1	-16.8471
chr12	105827110	105827185	SINE	B4A	B4	chr12B4A105826907	NonProperStrand	1	chr4	131908236	131908293	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-inf
chr14	68318425	68318458	protein_coding	Cdca2	exon	ENSMUSG00000048922	ProperStrand	50	chr16	23110974	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.0847
chr5	124927861	124927877	protein_coding	Rilpl2	exon	ENSMUSG00000029401	ProperStrand	6	chr11	106362640	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-12.1528
chr6	104100296	104100312	LINE	L1_Mus4	L1	chr6L1_Mus4104100249	ProperStrand	5	chr2	73052391	73052407	protein_coding	Ola1	utr5	ENSMUSG00000027108	NonProperStrand	3	1	-inf
chr18	25272140	25274218	protein_coding	Fhod3	utr3	ENSMUSG00000034295	ProperStrand	23	chr19	8963072	8963162	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-6.7721
chr4	109467386	109502417	protein_coding	Faf1	exon	ENSMUSG00000010517	ProperStrand	29	chr5	106337347	106337437	protein_coding	Zfp326	intron	ENSMUSG00000029290	ProperStrand	29	1	-16.2832
chr12	111932411	111932513	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr11	77995189	77995227	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	2	-2.9659
chr14	71004445	71004502	protein_coding	Epb4.9	utr3	ENSMUSG00000022099	ProperStrand	48	chr2	10111461	10111478	protein_coding	Itih5	intron	ENSMUSG00000025780	NonProperStrand	12	1	-17.0381
chr2	90235324	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	79201180	79201435	protein_coding	Polrmt	exon	ENSMUSG00000020329	ProperStrand	11	1	-7.8469
chr7	26408931	26409120	protein_coding	Atp5sl	exon	ENSMUSG00000057229	ProperStrand	9	chr7	116663636	116663693	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-14.5771
chr19	8946222	8946599	protein_coding	Ubxn1	exon	ENSMUSG00000071655	ProperStrand	68	chr12	17552939	17553071	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	5	-18.5863
chr16	35932620	35932636	protein_coding	Dtx3l	exon	ENSMUSG00000049502	ProperStrand	152	chr9	120039533	120039622	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.7413
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chrX	93136011	93136027	protein_coding	Las1l	exon	ENSMUSG00000057421	ProperStrand	248	3	-8.0637
chr10	94573966	94573982	LTR	RLTR44C	ERVK	chr10RLTR44C94573708	ProperStrand	4	chr4	139572479	139572497	LTR	MERVL_2A-int	ERVL	chr4MERVL_2A-int139571531	ProperStrand	39	1	-18.3828
chr14	80262508	80262525	lincRNA	Gm6999	intron	ENSMUSG00000075495	ProperStrand	265	chr1	136502339	136502439	protein_coding	Kdm5b	utr5	ENSMUSG00000042207	ProperStrand	223	1	-7.7124
chr6	122682416	122682876	protein_coding	Slc2a3	exon	ENSMUSG00000003153	ProperStrand	682	chr1	89673653	89673787	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	3	-0.7696
chr9	15123935	15124086	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	NonProperStrand	100	chr16	23110850	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-1.4755
chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	chr18	37456851	37456868	protein_coding	Pcdhb2	exon	ENSMUSG00000051599	ProperStrand	7	1	-15.0562
chr2	128485570	128485604	protein_coding	Anapc1	exon	ENSMUSG00000014355	ProperStrand	38	chr11	62416948	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-6.9492
chr11	98832924	98833008	protein_coding	Rara	exon	ENSMUSG00000037992	ProperStrand	37	chr11	62416600	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-6.1154
chr16	23110917	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	chr13	21262109	21262159	tRNA	tRNA63-LeuAAG	.	610927	ProperStrand	21	1	-1.5481
chr6	122269485	122269937	protein_coding	Phc1	exon	ENSMUSG00000040669	NonProperStrand	31	chr7	116664856	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	NonProperStrand	12	1	-17.6772
mmu-miR-6240	3	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr18	63109676	63109692	protein_coding	Apcdd1	exon	ENSMUSG00000071847	NonProperStrand	254	1	-3.1666
chr9	40403584	40403674	LTR	MLT1F1	MaLR	chr9MLT1F140403431	ProperStrand	1	chr9	40403738	40403828	SINE	B3	B2	chr9B340403700	ProperStrand	1	1	-inf
chr16	23111323	23111447	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr15	35721926	35721947	protein_coding	Vps13b	exon	ENSMUSG00000037646	ProperStrand	56	1	-9.1523
chr1	44224411	44224477	protein_coding	Ercc5	exon	ENSMUSG00000026048	ProperStrand	8	chr7	30231502	30231592	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	2	-19.2287
chr13	34220033	34220090	protein_coding	Tubb2b	exon	ENSMUSG00000045136	ProperStrand	49	chr9	120038615	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.4063
chr7	19736502	19736579	protein_coding	Snrpd2	intron	ENSMUSG00000040824	ProperStrand	23	chr9	15119639	15119729	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-7.3742
chr6	39348703	39348757	protein_coding	Mkrn1	utr3	ENSMUSG00000029922	ProperStrand	177	chr18	35714169	35714259	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-1.6140
chr19	44188455	44188545	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr8	32260408	32260430	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	2	-0.8827
chr16	57391589	57391746	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chrX	34622906	34623039	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	NonProperStrand	26	4	-19.5877
chr13	109115047	109115137	protein_coding	Depdc1b	intron	ENSMUSG00000021697	ProperStrand	19	chr10	23505155	23505235	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.1073
chr10	17443077	17443096	protein_coding	Cited2	utr5	ENSMUSG00000039910	ProperStrand	64	chr1	88247768	88247876	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-4.9718
chr2	29938898	29940389	protein_coding	Pkn3	exon	ENSMUSG00000026785	ProperStrand	3	chr4	130305563	130305619	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	1	-16.2970
chr19	24169280	24169301	protein_coding	Tjp2	utr3	ENSMUSG00000024812	ProperStrand	63	chr17	10400667	10400717	protein_coding	Qk	utr3	ENSMUSG00000062078	ProperStrand	63	1	-13.1195
chr2	168581517	168581540	protein_coding	Sall4	exon	ENSMUSG00000027547	ProperStrand	82	chr4	131866158	131866283	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-3.0948
chr3	79223176	79223193	protein_coding	Gm17359	intron	ENSMUSG00000091685	NonProperStrand	50	chr8	129468746	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	3	-11.3277
chr16	28456581	28456671	LINE	L1Md_F2	L1	chr16L1Md_F228456035	ProperStrand	1	chr7	5361154	5361234	protein_coding	Vmn1r58	utr3	ENSMUSG00000078808	ProperStrand	5	1	-inf
chr10	127947624	127947641	protein_coding	Esyt1	utr3	ENSMUSG00000025366	NonProperStrand	32	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-8.4943
chr15	94416715	94416736	protein_coding	Twf1	intron	ENSMUSG00000022451	ProperStrand	32	chr4	131865855	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.8186
chr13	56353448	56353465	protein_coding	Neurog1	utr5	ENSMUSG00000048904	ProperStrand	105	chr17	24857716	24857775	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.4222
chr9	37461839	37461929	protein_coding	Tbrg1	exon	ENSMUSG00000011114	ProperStrand	56	chr4	131865855	131865935	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.8759
chr11	48647373	48647463	protein_coding	Trim7	intron	ENSMUSG00000040350	NonProperStrand	20	chr3	68889026	68889049	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	6	-20.0638
chr9	96976265	96992795	protein_coding	Slc25a36	utr3	ENSMUSG00000032449	ProperStrand	159	chr4	131908699	131908856	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	6	-3.6553
chr7	13516150	13516203	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr12	82881530	82881546	protein_coding	Map3k9	exon	ENSMUSG00000042724	NonProperStrand	8	1	-12.8005
chr6	124764082	124764141	protein_coding	Tpi1	exon	ENSMUSG00000023456	ProperStrand	94	chr17	35299543	35299633	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	7	-19.1600
chr9	62221330	62225652	protein_coding	Anp32a	utr3	ENSMUSG00000032249	ProperStrand	75	chr16	23110828	23111005	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-1.6350
chr5	127737478	127737494	antisense	1700085B03Rik	.	ENSMUSG00000087104	ProperStrand	55	chr1	162966813	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-6.4309
chr11	115516623	115516690	protein_coding	Grb2	intron	ENSMUSG00000059923	ProperStrand	12	chr8	73419675	73419775	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-10.2408
chr12	6138323	6138341	LINE	Lx5	L1	chr12Lx56137339	ProperStrand	10	chr15	99456687	99456767	protein_coding	Racgap1	exon	ENSMUSG00000023015	ProperStrand	47	5	-inf
chr18	35716685	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	chr4	56910496	56910625	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	21	-0.7127
chr3	97817679	97851652	protein_coding	Notch2	exon	ENSMUSG00000027878	ProperStrand	86	chr19	43269721	43269737	protein_coding	Hpse2	intron	ENSMUSG00000074852	NonProperStrand	48	1	-13.0402
chr8	24050160	24050215	protein_coding	Myst3	exon	ENSMUSG00000031540	ProperStrand	111	chr16	23111721	23111811	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.0206
chr15	98957221	98957301	protein_coding	Spats2	utr5	ENSMUSG00000051934	ProperStrand	71	chr15	76452961	76453605	protein_coding	Vps28	exon	ENSMUSG00000062381	ProperStrand	2	1	-inf
chr16	33625246	33646649	protein_coding	Slc12a8	exon	ENSMUSG00000035506	ProperStrand	52	chr5	111121093	111121183	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-6.7180
chr10	41644311	41644329	protein_coding	Armc2	exon	ENSMUSG00000071324	ProperStrand	281	chr3	68889196	68889217	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-0.8569
chr2	179911618	179929927	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr11	69483136	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	9	-6.9324
chr3	103763928	103764009	protein_coding	Rsbn1	exon	ENSMUSG00000044098	ProperStrand	32	chr9	15118337	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-4.6545
chr11	102769489	102769540	protein_coding	Kif18b	exon	ENSMUSG00000051378	ProperStrand	43	chr18	35716763	35716831	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.7374
chr5	122018968	122026007	protein_coding	Aldh2	exon	ENSMUSG00000029455	ProperStrand	108	chr16	23110845	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-1.8544
chr10	70847009	70847025	protein_coding	Ipmk	utr3	ENSMUSG00000060733	NonProperStrand	6	chrX	34622906	34622930	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-7.7498
chr6	86477174	86477191	lincRNA	1600020E01Rik	exon	ENSMUSG00000086488	NonProperStrand	10	chr5	108336363	108336423	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-8.4814
chr9	15514257	15514276	protein_coding	Slc36a4	exon	ENSMUSG00000043885	ProperStrand	94	chr9	64022856	64022923	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-7.1311
chr4	57962437	57962527	protein_coding	Txn1	intron	ENSMUSG00000028367	ProperStrand	31	chr2	158182195	158182277	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-6.3003
chr1	36424623	36424713	protein_coding	4632411B12Rik	exon	ENSMUSG00000010453	ProperStrand	24	chr9	15130711	15130791	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	1	-11.0659
chr6	117874523	117874763	protein_coding	Hnrnpf	exon	ENSMUSG00000042079	ProperStrand	147	chr17	24857727	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	5	-6.1212
chr10	60519028	60519092	Low_complexity	GA-rich	Low_complexity	chr10GA-rich60519003	NonProperStrand	6	chr4	131865927	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-6.1051
chr9	40612833	40612921	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	chr2	26494708	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-0.9713
chr11	59232185	59232251	protein_coding	Snap47	intron	ENSMUSG00000009894	ProperStrand	19	chr7	150717298	150717326	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-7.8014
chr15	79913293	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr12	82317769	82317785	protein_coding	Slc8a3	exon	ENSMUSG00000079055	ProperStrand	126	1	-2.2819
chr14	102533101	102533191	LINE	Lx8	L1	chr14Lx8102532959	ProperStrand	1	chr14	102533370	102533460	LTR	MTB	MaLR	chr14MTB102533224	ProperStrand	1	1	-inf
chr4	131908359	131908459	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr16	87487853	87487898	protein_coding	Cct8	exon	ENSMUSG00000025613	ProperStrand	65	1	-7.1001
chr10	79608282	79608382	protein_coding	Atp5d	utr3	ENSMUSG00000003072	ProperStrand	44	chr17	35087894	35087920	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-5.8073
chr15	64143850	64143867	protein_coding	Asap1	intron	ENSMUSG00000022377	ProperStrand	29	chr11	106362326	106362378	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-7.2878
chr13	55234303	55234319	protein_coding	Zfp346	utr3	ENSMUSG00000021481	ProperStrand	22	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-9.7632
chrX	131140784	131140884	protein_coding	Hnrnph2	utr3	ENSMUSG00000045427	ProperStrand	111	chr19	8946074	8946175	protein_coding	Ubxn1	utr5	ENSMUSG00000071655	ProperStrand	68	4	-19.8920
chr5	74489266	74489324	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr12	111839708	111839724	protein_coding	Dync1h1	utr5	ENSMUSG00000018707	NonProperStrand	7	1	-10.0043
chr12	4824838	4824854	protein_coding	0610009D07Rik	intron	ENSMUSG00000037361	NonProperStrand	2	chr9	15119631	15119660	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-9.8289
chr7	123441696	123441796	protein_coding	Plekha7	intron	ENSMUSG00000045659	ProperStrand	66	chr11	58115972	58116018	tRNA	tRNA1911-LeuCAA	.	527656	ProperStrand	165	1	-11.0913
chr4	149087552	149087569	SINE	B4	B4	chr4B4149087494	NonProperStrand	12	chr16	23110875	23110940	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.4686
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr8	126729316	126729332	protein_coding	Gm20388	intron	ENSMUSG00000092329	NonProperStrand	203	1	-3.5736
chr16	42672926	42673006	LINE	L1_Mus4	L1	chr16L1_Mus442672907	ProperStrand	1	chr18	71329121	71329211	LINE	L1Md_F2	L1	chr18L1Md_F271328918	ProperStrand	1	1	-inf
chr5	76050649	76050729	protein_coding	Kit	utr3	ENSMUSG00000005672	ProperStrand	58	chr19	8800422	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-3.5925
chr10	103046847	103046937	LINE	L1_Mus1	L1	chr10L1_Mus1103046677	ProperStrand	1	chr10	103047221	103047301	LINE	L1_Mus1	L1	chr10L1_Mus1103047204	NonProperStrand	1	1	-inf
chr7	52276812	52276912	protein_coding	Rras	utr3	ENSMUSG00000038387	ProperStrand	6	chr9	120039627	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-7.9123
chr16	91637306	91638243	protein_coding	Gart	exon	ENSMUSG00000022962	ProperStrand	200	chr12	112779177	112779267	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-2.5639
chr11	120421717	120421776	protein_coding	P4hb	utr3	ENSMUSG00000025130	ProperStrand	83	chr2	167469398	167469498	protein_coding	Tmem189	utr3	ENSMUSG00000090213	ProperStrand	6	1	-17.2000
chr8	83138737	83138753	protein_coding	Frem3	exon	ENSMUSG00000042353	NonProperStrand	53	chr11	62416951	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-6.2880
chr6	125091784	125091829	protein_coding	Nop2	intron	ENSMUSG00000038279	ProperStrand	39	chr9	39358287	39358304	protein_coding	Olfr958	exon	ENSMUSG00000050853	NonProperStrand	266	1	-11.1968
chr8	13159389	13159405	protein_coding	Lamp1	exon	ENSMUSG00000031447	ProperStrand	92	chr15	34370545	34370631	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-2.7794
chr19	44188368	44188457	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr4	5993263	5993282	protein_coding	Fam110b	intron	ENSMUSG00000049119	NonProperStrand	15	1	-10.6054
chr2	111848826	111848844	protein_coding	Olfr1310	exon	ENSMUSG00000074949	NonProperStrand	1	chrX	34622960	34623025	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-inf
chr7	36400083	36400874	protein_coding	Ankrd27	exon	ENSMUSG00000034867	ProperStrand	132	chr15	79363981	79364052	protein_coding	Ddx17	intron	ENSMUSG00000055065	ProperStrand	140	1	-10.0299
chr8	97772867	97772883	protein_coding	Cngb1	exon	ENSMUSG00000031789	NonProperStrand	17	chr2	126942562	126942652	protein_coding	Ncaph	intron	ENSMUSG00000034906	ProperStrand	43	4	-inf
chr11	3420132	3420249	protein_coding	Smtn	intron	ENSMUSG00000020439	ProperStrand	222	chr1	12365021	12365039	snRNA	ENSMUSG00000064969_U6	.	ENSMUSG00000064969	ProperStrand	1	1	-inf
chr19	48027696	48027713	protein_coding	Ccdc147	intron	ENSMUSG00000046585	ProperStrand	15	chr4	131908751	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.5353
chr5	121655016	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	chr2	26768049	26768120	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	7	-4.9057
chr4	116732242	116732306	protein_coding	Eif2b3	intron	ENSMUSG00000028683	ProperStrand	7	chr17	35088957	35089010	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-10.2562
chr19	44144122	44144138	protein_coding	Erlin1	utr5	ENSMUSG00000025198	NonProperStrand	2	chr15	79908931	79908955	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-12.8905
chr11	116099379	116099395	protein_coding	Evpl	utr5	ENSMUSG00000034282	ProperStrand	33	chr16	23110828	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.9284
chr4	134877263	134878227	protein_coding	Srrm1	exon	ENSMUSG00000028809	ProperStrand	142	chr2	92852989	92853005	protein_coding	Prdm11	exon	ENSMUSG00000075028	NonProperStrand	6	1	-16.3887
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr1	53409486	53409502	protein_coding	Asnsd1	utr5	ENSMUSG00000026095	NonProperStrand	105	1	-7.5985
chr9	90064019	90064035	protein_coding	Adamts7	intron	ENSMUSG00000032363	NonProperStrand	2	chr4	154624313	154624333	protein_coding	2610002J02Rik	utr5	ENSMUSG00000073684	ProperStrand	18	1	-21.6032
chr18	85146870	85150571	protein_coding	Fbxo15	exon	ENSMUSG00000034391	ProperStrand	23	chr4	116827118	116827157	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-8.9681
chr12	114391690	114391865	protein_coding	Crip1	exon	ENSMUSG00000006360	ProperStrand	8	chr11	118133539	118133583	protein_coding	Usp36	exon	ENSMUSG00000033909	ProperStrand	27	3	-19.1506
chr9	106760428	106760460	protein_coding	Vprbp	exon	ENSMUSG00000040325	ProperStrand	35	chrX	10159312	10159350	protein_coding	Tspan7	exon	ENSMUSG00000058254	ProperStrand	3	1	-inf
chr11	62416575	62416606	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr2	84912015	84912264	protein_coding	Tnks1bp1	exon	ENSMUSG00000033955	NonProperStrand	3	1	-15.3563
chr6	39578610	39589621	protein_coding	Braf	exon	ENSMUSG00000002413	ProperStrand	7	chr4	131865457	131865513	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-8.3161
chr17	47881188	47881288	protein_coding	Tfeb	intron	ENSMUSG00000023990	ProperStrand	78	chr8	13876099	13876170	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-6.6232
chrX	35917196	35917287	protein_coding	Cul4b	utr5	ENSMUSG00000031095	ProperStrand	31	chr10	23505152	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-8.4644
chr17	25968857	25968897	protein_coding	Stub1	exon	ENSMUSG00000039615	ProperStrand	24	chr7	29136597	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-6.7993
chr6	88453848	88453925	protein_coding	Sec61a1	utr3	ENSMUSG00000030082	ProperStrand	46	chr11	69483136	69483190	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-7.5082
chr9	65049533	65049561	snRNA	ENSMUSG00000075930_U5	.	ENSMUSG00000075930	ProperStrand	175	chr17	24857794	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-0.7684
chr3	108187818	108187835	protein_coding	Psrc1	utr5	ENSMUSG00000068744	NonProperStrand	12	chr17	24857731	24857781	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-5.3067
chr4	130310019	130337106	protein_coding	Pum1	utr3	ENSMUSG00000028580	ProperStrand	131	chr11	97642952	97643074	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	9	-15.8112
chr2	34769632	34769685	lincRNA	Gm13448	intron	ENSMUSG00000086001	NonProperStrand	3	chr16	23111689	23111779	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-inf
chr4	21606097	21606114	protein_coding	Prdm13	exon	ENSMUSG00000040478	ProperStrand	51	chr11	97642977	97643069	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.7531
chr2	120339453	120339471	protein_coding	Zfp106	intron	ENSMUSG00000027288	NonProperStrand	9	chr16	23110535	23110581	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-6.0870
chr15	89145708	89145724	protein_coding	Sbf1	utr5	ENSMUSG00000036529	NonProperStrand	4	chr4	116827128	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-12.7004
chr9	59516727	59525939	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr15	5068443	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	4	-3.9480
chr6	47738084	47738128	misc_RNA	Y_RNA	.	ENSMUSG00000065701	ProperStrand	129	chr3	144748059	144749264	protein_coding	Clca5	exon	ENSMUSG00000036960	ProperStrand	86	1	-11.0529
chr9	95379688	95379764	protein_coding	2610101N10Rik	exon	ENSMUSG00000032407	ProperStrand	56	chr9	15119646	15119736	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	4	-9.7285
chr7	52302638	52302655	protein_coding	Prr12	exon	ENSMUSG00000046574	NonProperStrand	5	chr17	35089183	35089235	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-10.6035
chr8	30085462	30085484	protein_coding	Unc5d	intron	ENSMUSG00000063626	ProperStrand	22	chr11	77996557	77996606	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-8.0992
chr6	37329879	37329969	protein_coding	Creb3l2	exon	ENSMUSG00000038648	ProperStrand	4	chr19	8800373	8800453	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-9.0532
chr5	109063677	109063694	protein_coding	Tmem175	intron	ENSMUSG00000013495	ProperStrand	31	chr17	24856708	24856753	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-7.7451
chr8	49314116	49314206	protein_coding	Odz3	exon	ENSMUSG00000031561	ProperStrand	56	chr16	23110960	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	13	-16.8866
chr9	7407602	7407622	LTR	RLTR6_Mm	ERV1	chr9RLTR6_Mm7407144	NonProperStrand	4	chr11	77996557	77996620	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	3	-19.3621
chr5	123622050	123622066	protein_coding	Hpd	exon	ENSMUSG00000029445	ProperStrand	254	chr14	76247739	76247773	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-1.6620
chr11	101178982	101180777	protein_coding	Psme3	exon	ENSMUSG00000078652	ProperStrand	17	chr16	23110986	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-3.4874
chr1	162966813	162966847	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	chr1	145626058	145626148	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-2.1089
chr11	61283362	61283379	LTR	RLTR20B3	ERVK	chr11RLTR20B361283341	ProperStrand	10	chr4	125825803	125825861	protein_coding	Fam176b	utr5	ENSMUSG00000050212	ProperStrand	6	1	-19.4901
chr2	121079385	121079402	protein_coding	Trp53bp1	exon	ENSMUSG00000043909	ProperStrand	45	chr4	131865855	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.2312
chr2	34681615	34681635	protein_coding-noncoding	Fbxw2	utr3	ENSMUSG00000035949	NonProperStrand	10	chr5	121655037	121655124	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-7.2897
chr7	123475930	123476469	protein_coding	Rps13	exon	ENSMUSG00000090862	ProperStrand	36	chr5	74489590	74489670	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-4.7499
chr15	98673847	98676840	protein_coding	Mll2	exon	ENSMUSG00000048154	ProperStrand	170	chr7	116663634	116663762	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	6	-7.7352
chr9	72143686	72143776	protein_coding	Zfp280d	intron	ENSMUSG00000038535	ProperStrand	11	chr13	57734188	57734278	protein_coding	Spock1	intron	ENSMUSG00000056222	NonProperStrand	20	1	-18.9599
chr5	137741350	137741564	protein_coding	Srrt	exon	ENSMUSG00000037364	ProperStrand	31	chr11	62418054	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-6.8646
chrX	159469984	159470000	protein_coding	Ctps2	utr3	ENSMUSG00000031360	NonProperStrand	12	chr11	106362619	106362635	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-10.6746
chr19	28693044	28693061	protein_coding	Glis3	intron	ENSMUSG00000052942	NonProperStrand	14	chr4	131908236	131908296	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-6.7008
chr3	32954538	32954555	protein_coding	Pex5l	intron	ENSMUSG00000027674	ProperStrand	52	chr2	130102052	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-5.6365
chr4	137682351	137682369	protein_coding	Eif4g3	exon	ENSMUSG00000028760	NonProperStrand	28	chr6	42308706	42308723	protein_coding	Epha1	utr3	ENSMUSG00000029859	ProperStrand	16	1	-17.3874
chr9	64023228	64023291	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	chr16	38158138	38158226	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	1	-3.8977
chr17	24858194	24858604	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr12	81492627	81492707	snoRNA	ENSMUSG00000088158_Scarna3b	.	ENSMUSG00000088158	ProperStrand	147	1	-7.8619
chr17	27988620	27988652	protein_coding	Snrpc	exon	ENSMUSG00000024217	ProperStrand	9	chr11	97643000	97643090	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-10.0724
chr3	96508367	96508458	protein_coding	Pias3	utr5	ENSMUSG00000028101	ProperStrand	5	chr17	6232006	6232022	protein_coding	Tulp4	exon	ENSMUSG00000034377	NonProperStrand	265	1	-15.4907
chr10	12417903	12418855	protein_coding	Utrn	exon	ENSMUSG00000019820	ProperStrand	69	chr16	23111452	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-2.1087
chr2	120336367	120338510	protein_coding	Zfp106	exon	ENSMUSG00000027288	ProperStrand	199	chr11	69483192	69483229	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-2.5115
chr4	138983967	138984068	protein_coding	Ubr4	exon	ENSMUSG00000066036	ProperStrand	304	chr5	108334267	108334328	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-1.9113
chrX	84483706	84483741	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr16	23109028	23109090	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	2	-4.3721
chr13	38085924	38085948	protein_coding	Ssr1	exon	ENSMUSG00000021427	ProperStrand	65	chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	1	-9.6713
chr14	57595170	57595260	LINE	L1_Mus1	L1	chr14L1_Mus157595109	NonProperStrand	1	chr18	20681299	20681379	protein_coding	Dsg3	intron	ENSMUSG00000056632	ProperStrand	1	1	-inf
chr10	128257530	128257546	protein_coding	Ormdl2	utr5	ENSMUSG00000025353	ProperStrand	51	chr1	71654524	71654540	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	1	-8.1583
chr2	171730737	171730754	LINE	L1M3	L1	chr2L1M3171730466	NonProperStrand	7	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.7768
chr13	96102573	96102648	snoRNA	ENSMUSG00000077380_SNORA68	.	ENSMUSG00000077380	ProperStrand	51	chr12	106269284	106269323	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-4.4494
chr13	9494122	9494139	protein_coding	Dip2c	exon	ENSMUSG00000048264	ProperStrand	27	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-9.3465
chr9	56336485	56336608	protein_coding	Hmg20a	exon	ENSMUSG00000032329	ProperStrand	87	chr1	182261853	182261869	protein_coding	Itpkb	intron	ENSMUSG00000038855	NonProperStrand	27	1	-14.1814
chr7	16955669	16955759	protein_coding	Sae1	exon	ENSMUSG00000052833	ProperStrand	29	chr7	116664794	116664874	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.8662
chr5	132909648	132909664	protein_coding	Auts2	intron	ENSMUSG00000029673	NonProperStrand	37	chr8	73419683	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.0248
chr7	29100057	29100091	protein_coding	Supt5h	utr3	ENSMUSG00000003435	ProperStrand	123	chr4	116827121	116827173	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-5.6257
chr2	27281841	27281857	protein_coding	Vav2	exon	ENSMUSG00000009621	NonProperStrand	31	chr8	77524969	77525059	protein_coding	Hmgxb4	exon	ENSMUSG00000034518	ProperStrand	25	1	-16.3804
chr2	145199197	145199214	sense_intronic	Gm14093	.	ENSMUSG00000087158	NonProperStrand	7	chr16	23110455	23110515	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-6.6152
chr5	134874142	134874219	protein_coding	Gtf2ird1	intron	ENSMUSG00000023079	ProperStrand	85	chr17	35089181	35089211	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	2	-7.9513
chr2	27281841	27281857	protein_coding	Vav2	exon	ENSMUSG00000009621	NonProperStrand	31	chr9	22598207	22598223	protein_coding	Bbs9	exon	ENSMUSG00000035919	ProperStrand	51	1	-14.9765
chr4	131399490	131399506	protein_coding	Mecr	exon	ENSMUSG00000028910	NonProperStrand	109	chr18	63109676	63109692	protein_coding	Apcdd1	exon	ENSMUSG00000071847	NonProperStrand	254	1	-9.2230
chr2	41199972	41199989	protein_coding	Lrp1b	exon	ENSMUSG00000049252	ProperStrand	376	chr3	153573574	153573597	snoRNA	ENSMUSG00000064731_Snord45b	.	ENSMUSG00000064731	ProperStrand	205	1	-7.1863
chr17	25996060	25996076	protein_coding	Wdr90	exon	ENSMUSG00000073434	ProperStrand	91	chr4	131908396	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.8718
chr16	14191843	14191943	protein_coding	Nde1	utr3	ENSMUSG00000022678	ProperStrand	23	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-5.4450
chr1	165983749	165983765	protein_coding	Sele	exon	ENSMUSG00000026582	NonProperStrand	31	chr5	130300431	130300483	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.6980
chr5	122905050	122905086	protein_coding	Atp2a2	intron	ENSMUSG00000029467	NonProperStrand	9	chr7	116664817	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-14.6571
chr9	107943314	107943414	protein_coding	Ip6k1	exon	ENSMUSG00000032594	ProperStrand	61	chr7	52382755	52382810	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-6.7191
chr2	69860067	69860167	protein_coding	Ubr3	utr3	ENSMUSG00000044308	ProperStrand	62	chr6	51872316	51872332	protein_coding	Skap2	exon	ENSMUSG00000059182	NonProperStrand	34	1	-14.3929
chr6	28752940	28753040	protein_coding	Snd1	intron	ENSMUSG00000001424	ProperStrand	210	chr6	125071839	125071884	protein_coding	Chd4	intron	ENSMUSG00000063870	ProperStrand	303	8	-21.7518
chr15	61928483	61928538	lincRNA	Pvt1	intron	ENSMUSG00000072566	ProperStrand	51	chr2	32134358	32134391	protein_coding	Swi5	utr3	ENSMUSG00000044627	ProperStrand	16	6	-inf
chr2	90235316	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	135766507	135766551	protein_coding	Asap3	intron	ENSMUSG00000036995	ProperStrand	9	2	-13.3409
chr7	117189903	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	chr11	6519809	6519945	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	7	-2.6017
chr11	3278116	3278206	protein_coding	Limk2	intron	ENSMUSG00000020451	NonProperStrand	5	chr19	10079748	10079828	protein_coding	Rab3il1	intron	ENSMUSG00000024663	ProperStrand	14	1	-inf
chr7	128100761	128100783	protein_coding	Cdr2	utr3	ENSMUSG00000030878	ProperStrand	21	chr10	110918559	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	3	-12.8667
chr8	125626932	125627005	snoRNA	ENSMUSG00000064450_Snord68	.	ENSMUSG00000064450	ProperStrand	181	chr9	15119699	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-0.9580
chr4	141251378	141254697	protein_coding	Ddi2	exon	ENSMUSG00000078515	ProperStrand	79	chr1	162965551	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.7847
chr5	23781698	23781716	LTR	RLTR12B	ERVK	chr5RLTR12B23781501	ProperStrand	2	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-16.4215
chr7	133938952	133939017	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	chr4	122264167	122264184	pseudogene	Gm12877	.	ENSMUSG00000081377	NonProperStrand	16	1	-11.0210
chr11	50014162	50014185	protein_coding	Sqstm1	utr3	ENSMUSG00000015837	ProperStrand	36	chr5	121655017	121655098	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.7185
chr2	158184131	158184209	snoRNA	ENSMUSG00000064995_SNORA71	.	ENSMUSG00000064995	ProperStrand	430	chr12	106269464	106269554	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-0.9204
chr18	36957764	36957794	protein_coding	Zmat2	utr3	ENSMUSG00000001383	ProperStrand	25	chr11	69481333	69481432	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-8.0614
chr4	153410349	153410365	protein_coding	Ccdc27	exon	ENSMUSG00000039492	ProperStrand	94	chr11	6428109	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.4052
chr1	13115538	13115616	protein_coding	Prdm14	exon	ENSMUSG00000042414	ProperStrand	3	chr16	23110968	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-9.5778
chr2	144076879	144076953	protein_coding	Snx5	utr3	ENSMUSG00000027423	ProperStrand	64	chr11	6319550	6319632	protein_coding	Ppia	utr3	ENSMUSG00000071866	ProperStrand	127	1	-11.6783
mmu-miR-6240	4	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr10	128116574	128116699	protein_coding	Rab5b	utr3	ENSMUSG00000000711	ProperStrand	14	5	-inf
chr14	35505602	35505630	protein_coding	Wapal	exon	ENSMUSG00000041408	ProperStrand	93	chr10	23505152	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-2.4533
chr7	119253775	119253792	protein_coding	Usp47	utr3	ENSMUSG00000059263	ProperStrand	40	chr16	23111374	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.8604
chr15	8300999	8301031	protein_coding	Nipbl	exon	ENSMUSG00000022141	ProperStrand	45	chr2	30199224	30199266	protein_coding	Nup188	exon	ENSMUSG00000052533	ProperStrand	96	3	-20.1550
chr2	135820134	135824417	protein_coding	Plcb4	exon	ENSMUSG00000039943	NonProperStrand	57	chr3	102856778	102858591	protein_coding	Csde1	exon	ENSMUSG00000068823	ProperStrand	122	1	-11.9917
chr5	122580412	122584741	protein_coding	Ccdc63	utr5	ENSMUSG00000043036	ProperStrand	120	chr2	21136127	21136143	protein_coding	Thnsl1	utr3	ENSMUSG00000048550	ProperStrand	10	1	-15.5985
chr6	142438807	142441117	protein_coding	Ldhb	exon	ENSMUSG00000030246	ProperStrand	224	chr10	110918549	110918639	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-2.4436
chr4	141620146	141620208	protein_coding	Tmem51	intron	ENSMUSG00000040616	ProperStrand	30	chr18	35714163	35714216	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	4	-15.0874
chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	chr11	6428076	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-1.9203
chr17	24858763	24858832	protein_coding	Rps2	utr3	ENSMUSG00000044533	ProperStrand	373	chr11	59025355	59025372	protein_coding	Arf1	utr3	ENSMUSG00000048076	ProperStrand	52	3	-19.4799
chr3	84494549	84505875	protein_coding	Tmem154	exon	ENSMUSG00000056498	ProperStrand	2	chr11	68886928	68887008	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-11.5005
chr2	61892317	61892334	protein_coding	Slc4a10	intron	ENSMUSG00000026904	ProperStrand	40	chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-7.2609
chr6	121423179	121423195	protein_coding	Iqsec3	utr5	ENSMUSG00000040797	NonProperStrand	139	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-3.6052
chr19	46156791	46157812	protein_coding	Nolc1	exon	ENSMUSG00000015176	ProperStrand	53	chr18	35716754	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-8.7235
chr11	104366960	104368465	protein_coding	Cdc27	exon	ENSMUSG00000020687	ProperStrand	24	chr15	81749709	81749769	protein_coding	Polr3h	intron	ENSMUSG00000022476	ProperStrand	11	4	-19.8732
chr13	96283433	96283523	protein_coding	F2rl1	exon	ENSMUSG00000021678	ProperStrand	28	chr1	71655988	71656068	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	2	-14.8523
chr4	43505907	43505931	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr4	136572166	136572182	protein_coding-noncoding	Zbtb40	utr3	ENSMUSG00000060862	NonProperStrand	1	1	-inf
chr8	23535075	23535095	protein_coding	Mrps31	intron	ENSMUSG00000031533	ProperStrand	3	chr5	108334194	108334317	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-11.1157
chr13	80727020	80727100	LINE	Lx6	L1	chr13Lx680725827	NonProperStrand	1	chr13	80727255	80727345	LTR	RLTR31_Mm	ERVK	chr13RLTR31_Mm80727213	ProperStrand	1	1	-inf
chr12	45872808	45872888	LTR	IAPEz-int	ERVK	chr12IAPEz-int45869380	ProperStrand	1	chr14	80262044	80262134	protein_coding	Gm10845	utr3	ENSMUSG00000075496	ProperStrand	5	1	-inf
chr4	45000155	45000215	protein_coding	Grhpr	exon	ENSMUSG00000035637	ProperStrand	35	chrX	34622906	34622943	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	4	-13.5554
chr19	5609827	5609844	protein_coding	Kat5	intron	ENSMUSG00000024926	ProperStrand	20	chr12	12944235	12944251	protein_coding	Mycn	exon	ENSMUSG00000037169	NonProperStrand	109	1	-14.3386
chr2	26768393	26768417	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	chr12	92811941	92812014	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	1	-1.3967
chr17	46285129	46285145	protein_coding	Mad2l1bp	exon	ENSMUSG00000034509	NonProperStrand	67	chr7	108440949	108440967	protein_coding	Atg16l2	intron	ENSMUSG00000047767	ProperStrand	121	1	-11.6826
chr1	33828651	33828669	protein_coding	Zfp451	intron	ENSMUSG00000042197	NonProperStrand	393	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-5.2141
chr18	75161145	75161173	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	chr8	129468746	129468846	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-0.8852
chr7	107788998	107789070	protein_coding	Rab6a	utr3	ENSMUSG00000030704	ProperStrand	23	chr4	131908707	131908797	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.7500
chr2	142945770	142945788	LINE	Lx8	L1	chr2Lx8142945705	ProperStrand	1	chr7	118219584	118219620	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-inf
chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr10	90076969	90076990	protein_coding	Anks1b	intron	ENSMUSG00000058589	NonProperStrand	230	1	-3.8619
chr17	24212301	24212322	protein_coding	Pdpk1	utr3	ENSMUSG00000024122	ProperStrand	18	chr19	8800355	8800455	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-5.8558
chr10	85855414	85855431	protein_coding	Syn3	intron	ENSMUSG00000059602	NonProperStrand	40	chr18	35716762	35716815	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.8651
chr2	90235320	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	125999430	125999447	protein_coding	2310008H09Rik	utr5	ENSMUSG00000030980	ProperStrand	42	1	-5.1514
chr2	22785364	22785404	protein_coding	Pdss1	intron	ENSMUSG00000026784	ProperStrand	2	chr4	131865380	131865482	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-11.3495
chr7	29605183	29605249	protein_coding	Hnrnpl	exon	ENSMUSG00000015165	ProperStrand	150	chr14	76247720	76247810	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-2.5124
chr8	90014292	90014354	lincRNA	C230036H16Rik	intron	ENSMUSG00000091862	ProperStrand	8	chr3	108357413	108357503	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-8.5976
chr11	92960818	92960835	protein_coding	Car10	utr5	ENSMUSG00000056158	ProperStrand	25	chr14	31827510	31827544	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-8.7022
chr10	80643994	80644047	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr9	29012576	29012593	protein_coding	Ntm	intron	ENSMUSG00000059974	NonProperStrand	27	1	-7.6917
chr13	9833562	9833651	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr10	10972881	10972961	lincRNA	4930432B10Rik	intron	ENSMUSG00000085480	ProperStrand	1	1	-inf
chr3	120861729	120861761	protein_coding	Rwdd3	exon	ENSMUSG00000028133	ProperStrand	3	chr16	23110886	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr11	72005081	72008072	protein_coding	4933427D14Rik	exon	ENSMUSG00000020807	ProperStrand	13	chr19	5719336	5719352	protein_coding	Ehbp1l1	exon	ENSMUSG00000024937	ProperStrand	75	1	-16.0015
chr16	11144215	11144305	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr8	73419657	73419747	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-0.9165
chr4	24555747	24555764	protein_coding	Klhl32	intron	ENSMUSG00000040387	ProperStrand	67	chr7	52382237	52382314	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-8.0628
chr8	109177748	109177803	protein_coding	Cdh1	exon	ENSMUSG00000000303	ProperStrand	283	chr17	23945118	23945359	protein_coding	Srrm2	utr5	ENSMUSG00000039218	ProperStrand	521	1	-5.9109
chr15	30421276	30421292	protein_coding	Ctnnd2	intron	ENSMUSG00000022240	ProperStrand	24	chr11	97643024	97643060	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.1417
chr2	102393028	102393118	protein_coding-noncoding	Pamr1	utr5	ENSMUSG00000027188	ProperStrand	1	chr2	102392865	102392955	protein_coding	Pamr1	intron	ENSMUSG00000027188	ProperStrand	2	1	-inf
chr9	51877831	51881306	protein_coding	Rdx	exon	ENSMUSG00000032050	ProperStrand	60	chr11	6428035	6428076	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.1922
chr13	23853830	23853878	protein_coding	Hist1h3a	exon	ENSMUSG00000069265	ProperStrand	12	chr14	33005093	33005138	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-7.1733
chr15	35359958	35360038	protein_coding	Vps13b	utr5	ENSMUSG00000037646	ProperStrand	56	chr14	33005141	33005231	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	9	-19.2629
chrX	160347488	160347504	protein_coding	Ap1s2	intron	ENSMUSG00000031367	ProperStrand	52	chr14	70802008	70808745	protein_coding	Piwil2	exon	ENSMUSG00000033644	ProperStrand	36	1	-14.6357
chr16	56035886	56035975	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	chr3	88497886	88497979	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	2	-5.5701
chr13	9833562	9833657	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr18	5774861	5774878	protein_coding	Zeb1	utr3	ENSMUSG00000024238	NonProperStrand	2	1	-12.3538
chr5	115940316	115940406	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	chr8	98269959	98270095	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	2	-2.7536
chr11	6428065	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr1	173041632	173041649	tRNA	tRNA710-ValCAC	.	771671	ProperStrand	206	1	-1.2016
chr9	78023110	78023186	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr9	64024466	64024509	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	7	-12.1358
chr5	104283007	104283024	protein_coding	Aff1	utr3	ENSMUSG00000029313	ProperStrand	82	chr7	152050608	152050660	protein_coding	Fgf4	utr3	ENSMUSG00000050917	ProperStrand	66	1	-12.4951
chr8	82177255	82177276	protein_coding	Otud4	intron	ENSMUSG00000036990	NonProperStrand	9	chr11	6520317	6520417	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	8	-20.3518
chr9	15130716	15130796	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	NonProperStrand	100	chr19	8800353	8800443	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	NonProperStrand	18	1	-14.7294
chr2	32780448	32780503	protein_coding	Fam129b	utr3	ENSMUSG00000026796	ProperStrand	22	chr7	117189938	117190028	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-5.2455
chr2	101539065	101539090	protein_coding	Traf6	utr3	ENSMUSG00000027164	ProperStrand	24	chr7	116663634	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-10.2381
chr3	99965053	99965133	protein_coding	Wdr3	utr5	ENSMUSG00000033285	ProperStrand	30	chr2	158182157	158182247	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-6.3656
chr6	72388906	72388922	protein_coding	Mat2a	intron	ENSMUSG00000053907	ProperStrand	51	chr7	29136573	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.6434
chr11	115657174	115657190	miRNA	AL645852.1	.	ENSMUSG00000093539	NonProperStrand	1	chr4	131865396	131865486	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-inf
chr11	74475500	74475541	protein_coding	1300001I01Rik	exon	ENSMUSG00000020741	ProperStrand	76	chr7	29136601	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-5.4620
chr9	58067490	58067580	protein_coding	Pml	utr3	ENSMUSG00000036986	ProperStrand	45	chr4	131866157	131866237	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-4.2057
chr16	13813784	13813848	protein_coding	Rrn3	utr3	ENSMUSG00000022682	ProperStrand	58	chr16	23111772	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.9572
chr1	88252588	88252615	protein_coding	Ncl	intron	ENSMUSG00000026234	ProperStrand	1184	chr14	64829132	64829149	protein_coding	Msra	intron	ENSMUSG00000054733	NonProperStrand	84	1	-6.6890
chr17	32499797	32499846	protein_coding	Wiz	exon	ENSMUSG00000024050	ProperStrand	26	chr6	61555286	61555303	protein_coding	Fam190a	intron	ENSMUSG00000039578	ProperStrand	28	2	-19.7148
chr3	32635340	32635361	protein_coding	Mrpl47	intron	ENSMUSG00000037531	ProperStrand	5	chr1	89681202	89681268	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	2	-16.9917
chr5	76329536	76329552	protein_coding	Kdr	utr3	ENSMUSG00000062960	ProperStrand	2	chr5	108336363	108336411	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-12.2768
chr1	162966190	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	chr16	23110454	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	11	-1.8482
chr5	74489543	74489563	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr1	59539683	59539700	protein_coding	Fzd7	utr5	ENSMUSG00000041075	ProperStrand	373	1	-2.2519
chr10	39346748	39346793	protein_coding	Traf3ip2	intron	ENSMUSG00000019842	ProperStrand	5	chr8	14619172	14619190	protein_coding	Dlgap2	intron	ENSMUSG00000047495	NonProperStrand	23	1	-18.8987
chr4	57268565	57268583	protein_coding	Ptpn3	intron	ENSMUSG00000038764	ProperStrand	48	chr11	106362640	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-7.8503
chr7	152494057	152494073	protein_coding	Mrgprf	exon	ENSMUSG00000031070	ProperStrand	2	chr4	131865459	131865495	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-11.3495
chr3	142351261	142351281	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr4	131865379	131865516	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	4	-1.4723
chr9	30838253	30838270	protein_coding	Zbtb44	utr5	ENSMUSG00000047412	NonProperStrand	3	chr11	69483195	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-14.4332
chr5	136707644	136707662	protein_coding	Sh2b2	exon	ENSMUSG00000005057	NonProperStrand	101	chr4	131865892	131865987	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-4.7445
chr18	60991854	60991954	protein_coding	Tcof1	exon	ENSMUSG00000024613	ProperStrand	68	chr7	118219574	118219591	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	3	-9.6081
chrX	50295841	50299146	protein_coding	Phf6	exon	ENSMUSG00000025626	ProperStrand	7	chr7	116664823	116664903	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-11.0704
chr15	32946951	32953472	protein_coding	Sdc2	exon	ENSMUSG00000022261	ProperStrand	4	chr19	8799021	8799052	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	3	-20.0641
chr4	116826925	116826945	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	chr2	26494708	26494753	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-0.8414
chr5	112795988	112798042	protein_coding	Hps4	intron	ENSMUSG00000042328	ProperStrand	27	chr5	74489564	74489644	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-5.3118
mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr18	35716684	35716883	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	28	-1.7626
chr2	157119950	157120991	protein_coding	Rpn2	exon	ENSMUSG00000027642	ProperStrand	363	chr3	68889088	68889222	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	2	-1.2460
chr3	37750806	37750824	LINE	L1_Mus3	L1	chr3L1_Mus337750762	ProperStrand	38	chr3	123210853	123210908	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.8448
chr6	38553351	38553416	protein_coding	Luc7l2	exon	ENSMUSG00000029823	ProperStrand	85	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-6.9280
chr1	182521450	182523022	protein_coding	Parp1	exon	ENSMUSG00000026496	ProperStrand	227	chr4	131865475	131865513	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	2	-3.1198
chr13	55105923	55105939	protein_coding	Unc5a	exon	ENSMUSG00000025876	NonProperStrand	96	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-7.6545
chr13	95242788	95242863	protein_coding	Ap3b1	exon	ENSMUSG00000021686	ProperStrand	96	chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	1	-7.5660
chr8	123100194	123100232	protein_coding	Gse1	exon	ENSMUSG00000031822	ProperStrand	97	chr11	55296279	55296314	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-5.2399
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr1	63225286	63225322	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	2	-5.8891
chr16	17153529	17153619	protein_coding	Ube2l3	utr3	ENSMUSG00000038965	ProperStrand	29	chr16	23110454	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-9.3522
chr9	44321161	44321178	protein_coding	Cxcr5	utr3	ENSMUSG00000047880	ProperStrand	2	chr19	8963118	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-9.4105
chr17	28726129	28726193	protein_coding	Srpk1	utr3	ENSMUSG00000004865	ProperStrand	61	chr9	62642320	62642365	protein_coding	Fem1b	utr3	ENSMUSG00000032244	ProperStrand	111	2	-18.7639
chr5	116010807	116010924	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	chr12	17553062	17553091	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-2.2077
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	113344842	113344995	protein_coding	Ttll3	exon	ENSMUSG00000030276	ProperStrand	17	1	-6.9523
chr7	125996756	125996802	protein_coding	2310008H09Rik	exon	ENSMUSG00000030980	ProperStrand	42	chr19	38116372	38116392	protein_coding	Myof	intron	ENSMUSG00000048612	ProperStrand	37	1	-15.0038
chr4	40224760	40226198	protein_coding	Ndufb6	exon	ENSMUSG00000071014	ProperStrand	12	chr4	41158542	41158606	snoRNA	ENSMUSG00000089308_SNORD121A	.	ENSMUSG00000089308	ProperStrand	209	4	-19.3770
chr9	15256604	15256694	LINE	L1Md_T	L1	chr9L1Md_T15256619	ProperStrand	1	chr1	79603744	79603824	protein_coding	Ap1s3	utr3	ENSMUSG00000054702	NonProperStrand	11	1	-inf
chr8	121868458	121868474	protein_coding	Hsbp1	utr5	ENSMUSG00000031839	NonProperStrand	3	chr2	26494708	26494770	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-9.2771
chr17	24987714	24987735	protein_coding	Hagh	utr5	ENSMUSG00000024158	ProperStrand	10	chr17	39985663	39985763	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-9.5626
chr4	43505656	43505705	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr15	84026177	84026235	protein_coding	Samm50	exon	ENSMUSG00000022437	ProperStrand	51	3	-8.4475
chr19	32748620	32748710	protein_coding	Atad1	utr3	ENSMUSG00000013662	ProperStrand	14	chr4	131908361	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-9.8417
chr14	31090289	31090306	protein_coding	Cacna1d	intron	ENSMUSG00000015968	ProperStrand	16	chr7	50976446	50976485	protein_coding	Klk13	exon	ENSMUSG00000054046	ProperStrand	5	1	-20.1026
chr4	63389602	63389618	protein_coding	Tnfsf15	utr3	ENSMUSG00000050395	NonProperStrand	121	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.3495
chr12	60141461	60141509	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	chr17	24665421	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	5	-2.2127
chr8	98269983	98270083	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	chr7	52381973	52382010	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	8	-6.7468
chr2	31529126	31529150	protein_coding	Exosc2	intron	ENSMUSG00000039356	ProperStrand	39	chr7	116664794	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	6	-17.5268
chr2	91436234	91436334	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	3	-2.8646
chr11	98876040	98876074	protein_coding	Top2a	exon	ENSMUSG00000020914	ProperStrand	324	chr11	85638828	85638944	protein_coding	Bcas3	utr3	ENSMUSG00000059439	ProperStrand	20	1	-12.1617
chr4	40702780	40702850	protein_coding	Smu1	exon	ENSMUSG00000028409	ProperStrand	23	chr8	129468745	129468831	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-6.2916
chr2	179710277	179710295	protein_coding	Taf4a	exon	ENSMUSG00000039117	NonProperStrand	8	chr18	77174221	77174237	protein_coding	Ier3ip1	intron	ENSMUSG00000090000	ProperStrand	7	1	-19.5782
chr4	131908689	131908724	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	chr19	38146416	38146529	snoRNA	ENSMUSG00000064646_SNORA42	.	ENSMUSG00000064646	ProperStrand	37	3	-5.4433
chr1	130245067	130245524	protein_coding	Mcm6	exon	ENSMUSG00000026355	ProperStrand	69	chr11	97641452	97641487	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	1	-7.5778
chr10	63621197	63621214	protein_coding	Ctnna3	intron	ENSMUSG00000060843	NonProperStrand	22	chr6	115757992	115758048	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-7.4682
chr11	113563783	113564642	protein_coding	Cpsf4l	exon	ENSMUSG00000018727	ProperStrand	3	chr16	30337612	30337638	protein_coding	Atp13a3	exon	ENSMUSG00000022533	ProperStrand	45	1	-inf
chr11	45935010	45935086	protein_coding	Adam19	exon	ENSMUSG00000011256	ProperStrand	134	chr10	23505559	23505627	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-5.9608
chr19	27312552	27312634	protein_coding	Vldlr	exon	ENSMUSG00000024924	ProperStrand	3	chr17	36000485	36000501	protein_coding	Nrm	exon	ENSMUSG00000059791	ProperStrand	253	1	-16.8120
chr4	8769991	8770009	protein_coding	Chd7	intron	ENSMUSG00000041235	NonProperStrand	45	chr4	131866608	131866674	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	2	-15.3153
chr3	55987229	55987247	protein_coding	Nbea	utr5	ENSMUSG00000027799	NonProperStrand	115	chr5	113302570	113302917	protein_coding	Myo18b	exon	ENSMUSG00000072720	ProperStrand	48	1	-12.4564
chr16	91648110	91656024	protein_coding	Son	exon	ENSMUSG00000022961	ProperStrand	59	chr7	116663633	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	7	-17.6181
chr16	85802545	85802562	protein_coding	Adamts1	exon	ENSMUSG00000022893	ProperStrand	102	chr2	84530865	84531297	protein_coding	Zdhhc5	exon	ENSMUSG00000034075	NonProperStrand	144	1	-10.4901
chr7	52309478	52309495	protein_coding	Prrg2	utr3	ENSMUSG00000007837	NonProperStrand	281	chr5	121655016	121655100	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-1.1933
chr4	46508088	46508157	snoRNA	ENSMUSG00000064410_SNORA36	.	ENSMUSG00000064410	ProperStrand	133	chr2	26494704	26494804	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	4	-6.9350
chr16	17027148	17027195	protein_coding-noncoding	Mapk1	utr5	ENSMUSG00000063358	ProperStrand	1	chr11	62416635	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-inf
chr11	20012671	20012689	protein_coding	Actr2	intron	ENSMUSG00000020152	NonProperStrand	17	chr9	78329456	78329477	protein_coding	Eef1a1	utr5	ENSMUSG00000037742	ProperStrand	1990	1	-8.8712
chr6	71995280	71995360	LINE	L1MC3	L1	chr6L1MC371995203	NonProperStrand	1	chr6	71995028	71995118	LTR	MTD	MaLR	chr6MTD71994974	NonProperStrand	1	1	-inf
chr11	115667935	115668040	protein_coding	Caskin2	exon	ENSMUSG00000034471	ProperStrand	17	chr17	24665422	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	2	-12.0084
chr2	26493413	26493518	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr12	88293863	88293919	protein_coding	2310044G17Rik	intron	ENSMUSG00000034157	ProperStrand	48	1	-6.6364
chr5	74489266	74489326	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr8	74844835	74844853	protein_coding	Klf2	utr3	ENSMUSG00000055148	NonProperStrand	8	1	-9.7175
chr5	110758684	110760012	protein_coding	Pole	exon	ENSMUSG00000007080	ProperStrand	125	chr12	13333552	13333569	protein_coding	Nbas	intron	ENSMUSG00000020576	NonProperStrand	23	1	-13.7812
chr3	87735310	87735389	protein_coding	Isg20l2	utr5	ENSMUSG00000048039	ProperStrand	10	chr14	76247807	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-7.7404
chr11	97489600	97489617	protein_coding	E130012A19Rik	exon	ENSMUSG00000043439	NonProperStrand	110	chr7	108440949	108440967	protein_coding	Atg16l2	intron	ENSMUSG00000047767	ProperStrand	121	1	-10.6872
chr2	3359942	3359979	protein_coding	Dclre1c	intron	ENSMUSG00000026648	ProperStrand	8	chr11	68886945	68887035	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-8.1810
chr9	14397578	14397594	protein_coding	Amotl1	exon	ENSMUSG00000013076	ProperStrand	72	chr2	22444249	22444312	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-7.4129
chr2	164625438	164625538	protein_coding	Acot8	intron	ENSMUSG00000017307	ProperStrand	9	chr3	123210912	123210971	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.6210
chr13	24824232	24824248	protein_coding	Fam65b	utr3	ENSMUSG00000036006	ProperStrand	51	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-9.6961
chr6	72311203	72311433	protein_coding	Rnf181	exon	ENSMUSG00000055850	ProperStrand	12	chr1	162967522	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-10.8048
chr9	118208142	118208232	Simple_repeat	(CA)n	Simple_repeat	chr9(CA)n118208027	ProperStrand	1	chr9	118612801	118612881	protein_coding	Itga9	intron	ENSMUSG00000039115	ProperStrand	27	1	-inf
chr10	80640887	80644265	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr4	131908235	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	36	-0.9168
chr18	63908609	63908625	protein_coding	Wdr7	intron	ENSMUSG00000040560	NonProperStrand	180	chr19	8798484	8798514	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-3.1459
chr14	65372767	65372870	snoRNA	ENSMUSG00000064442_SNORA36	.	ENSMUSG00000064442	ProperStrand	296	chr3	123210853	123210933	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	15	-15.9928
chr11	42440243	42440259	protein_coding	Gabrb2	exon	ENSMUSG00000007653	ProperStrand	248	chr13	115178213	115178285	protein_coding	Ndufs4	utr5	ENSMUSG00000021764	ProperStrand	7	1	-14.8895
chr13	98264751	98264776	lincRNA	Gm11019	exon	ENSMUSG00000078952	ProperStrand	113	chr4	131865884	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.8928
chr1	130175697	130175730	protein_coding	Ubxn4	utr3	ENSMUSG00000026353	ProperStrand	19	chr5	74489596	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-6.0104
chr2	125331722	125331739	protein_coding	Fbn1	utr5	ENSMUSG00000027204	ProperStrand	38	chr1	89673715	89673764	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-4.1129
chrX	97700114	97700204	protein_coding	Igbp1	intron	ENSMUSG00000031221	ProperStrand	33	chr6	85305492	85305573	protein_coding	Rab11fip5	intron	ENSMUSG00000051343	ProperStrand	16	1	-17.0731
chr14	65569197	65599004	protein_coding	Ints9	exon	ENSMUSG00000021975	ProperStrand	10	chr9	53033636	53033736	protein_coding	Ddx10	exon	ENSMUSG00000053289	ProperStrand	40	1	-17.9020
chr10	88872509	88872599	protein_coding	Gas2l3	utr3	ENSMUSG00000074802	NonProperStrand	9	chr1	89673651	89673731	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	6	-20.4538
chr13	49063312	49063374	protein_coding	Fam120a	utr5	ENSMUSG00000038014	ProperStrand	76	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-6.5144
chr2	12941437	12941454	LTR	MTE2a	MaLR	chr2MTE2a12941159	NonProperStrand	42	chr11	33061204	33061583	protein_coding	Npm1	exon	ENSMUSG00000057113	ProperStrand	352	1	-10.4872
chr11	82693714	82693737	protein_coding	Rad51l3	intron	ENSMUSG00000018841	ProperStrand	112	chr12	17552973	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-3.8993
chr4	43505743	43505823	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr14	52796110	52796296	protein_coding	Supt16h	exon	ENSMUSG00000035726	ProperStrand	193	1	-1.1977
chr10	90542211	90542268	protein_coding	Apaf1	exon	ENSMUSG00000019979	ProperStrand	27	chr10	80809668	80809684	protein_coding	Hmg20b	exon	ENSMUSG00000020232	ProperStrand	157	1	-12.9997
chr9	15119967	15119993	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	chr10	23505550	23505621	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-1.8867
chr17	84965405	84965456	protein_coding	Plekhh2	exon	ENSMUSG00000040852	ProperStrand	4	chr3	123210889	123210979	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-7.3786
chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	chr1	181027187	181027205	protein_coding	Smyd3	intron	ENSMUSG00000055067	ProperStrand	231	1	-8.0669
chr7	29171541	29171558	protein_coding	Med29	utr3	ENSMUSG00000003444	NonProperStrand	134	chr12	60141322	60141412	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-5.2519
chr2	26493366	26493449	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr6	97112875	97112929	snoRNA	ENSMUSG00000065728_SNORA36	.	ENSMUSG00000065728	ProperStrand	158	1	-2.0444
chr19	45867552	45867568	protein_coding	Kcnip2	utr3	ENSMUSG00000025221	NonProperStrand	6	chr9	34978825	34983360	protein_coding	Dcps	exon	ENSMUSG00000032040	ProperStrand	38	1	-18.2115
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr7	134671387	134671463	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-3.0647
chr17	46162189	46162279	protein_coding-noncoding	Vegfa	utr3	ENSMUSG00000023951	ProperStrand	1	chr4	131908721	131908801	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-inf
chr11	7067186	7069426	protein_coding	Adcy1	exon	ENSMUSG00000020431	ProperStrand	183	chr17	35647240	35647272	protein_coding	Pou5f1	exon	ENSMUSG00000024406	ProperStrand	104	1	-9.9718
chr7	52309977	52309993	protein_coding	Prrg2	exon	ENSMUSG00000007837	NonProperStrand	281	chr1	88247819	88247876	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-2.2721
chr7	29155371	29155387	protein_coding	Plekhg2	exon	ENSMUSG00000037552	NonProperStrand	3	chr4	132856503	132856526	protein_coding	Wdtc1	exon	ENSMUSG00000037622	ProperStrand	81	1	-19.0673
chr7	128180668	128180703	protein_coding	Mettl9	intron	ENSMUSG00000030876	ProperStrand	20	chr2	158182214	158182277	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-7.1805
chr11	100233969	100235675	protein_coding	Jup	exon	ENSMUSG00000001552	ProperStrand	123	chr4	131865859	131865979	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.6256
chr1	196785312	196785365	lincRNA	Gm16897	exon	ENSMUSG00000086469	ProperStrand	12	chr16	23111459	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.0123
chr3	96654255	96654271	protein_coding	Pdzk1	exon	ENSMUSG00000038298	ProperStrand	101	chr5	108334195	108334245	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-3.8316
chr19	21898314	21898356	protein_coding	Tmem2	exon	ENSMUSG00000024754	ProperStrand	133	chr13	34436391	34436407	protein_coding	Slc22a23	utr5	ENSMUSG00000038267	NonProperStrand	21	1	-13.8425
chr5	134525129	134525146	SINE	B4	B4	chr5B4134524934	ProperStrand	3	chr16	23111694	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-7.8619
chr2	20703451	20703566	protein_coding	Etl4	exon	ENSMUSG00000036617	ProperStrand	86	chr4	131908689	131908717	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.7764
chr10	80253574	80253674	protein_coding	Dot1l	exon	ENSMUSG00000061589	ProperStrand	48	chr9	15119646	15119736	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	9	-20.0495
chr18	80389619	80389985	protein_coding	Rbfa	exon	ENSMUSG00000024570	ProperStrand	9	chr9	83678799	83681879	protein_coding	Elovl4	exon	ENSMUSG00000032262	ProperStrand	159	1	-15.2365
chr3	142351261	142351279	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr2	89877648	89877664	protein_coding	Olfr1265	exon	ENSMUSG00000059910	NonProperStrand	4	1	-13.4632
chr2	119635204	119635247	protein_coding	Tyro3	exon	ENSMUSG00000027298	ProperStrand	35	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.3165
chr2	179322377	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr7	116663659	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-1.8799
chr6	39456774	39456796	protein_coding	Dennd2a	exon	ENSMUSG00000038456	ProperStrand	13	chr16	23111372	23111416	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.8569
chr7	75097803	75335020	protein_coding	Igf1r	exon	ENSMUSG00000005533	ProperStrand	121	chr18	35714177	35714291	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	3	-5.9643
chr3	88146938	88149339	protein_coding	Smg5	exon	ENSMUSG00000001415	ProperStrand	70	chr11	62418047	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-5.2565
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr9	15119289	15119425	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	2	-1.2428
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chrX	72214248	72214264	protein_coding-noncoding	Gab3	utr3	ENSMUSG00000032750	ProperStrand	420	1	-4.8824
chr9	31218034	31218114	protein_coding	Nfrkb	exon	ENSMUSG00000042185	ProperStrand	34	chr11	115274341	115274367	tRNA	tRNA1022-ArgCCT	.	478462	ProperStrand	28	3	-18.7548
chr19	23332023	23332040	protein_coding	Smc5	exon	ENSMUSG00000024943	ProperStrand	146	chr18	21054478	21054494	protein_coding	Trappc8	exon	ENSMUSG00000033382	ProperStrand	43	1	-12.2013
chr10	62302254	62302312	protein_coding	Tet1	exon	ENSMUSG00000047146	ProperStrand	286	chr11	69481383	69481473	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	4	-3.9557
chr8	35880389	35881460	protein_coding	Dusp4	exon	ENSMUSG00000031530	NonProperStrand	3	chr4	131908380	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-7.2242
chr9	63965077	63965094	protein_coding	Lctl	utr5	ENSMUSG00000032401	NonProperStrand	3	chr19	8799836	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-11.2482
chr11	51464192	51464208	protein_coding	N4bp3	utr5	ENSMUSG00000001053	NonProperStrand	41	chr1	40548304	40548320	protein_coding	Il18r1	utr3	ENSMUSG00000026070	NonProperStrand	4	1	-21.8874
chr5	103321651	103321667	protein_coding	Arhgap24	exon	ENSMUSG00000057315	NonProperStrand	21	chr18	73693168	73693188	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-7.6156
chr2	160577558	160577828	protein_coding	Plcg1	exon	ENSMUSG00000016933	ProperStrand	65	chr1	39425097	39426891	protein_coding	Rpl31	exon	ENSMUSG00000073702	ProperStrand	41	2	-inf
chr2	32154599	32154782	protein_coding	Golga2	exon	ENSMUSG00000002546	ProperStrand	10	chr1	162965555	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-11.0796
chr4	136876224	136876254	protein_coding	Cdc42	utr3	ENSMUSG00000006699	ProperStrand	38	chr11	62416600	62416657	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-6.0626
chr18	32405206	32405222	protein_coding	Ercc3	exon	ENSMUSG00000024382	ProperStrand	280	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-1.7579
chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	chr7	118219598	118219651	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-2.0928
chr12	55835610	55835700	snRNA	ENSMUSG00000075960_U1	.	ENSMUSG00000075960	ProperStrand	210	chr3	85944537	85944610	snoRNA	ENSMUSG00000064390_Rnu73b	.	ENSMUSG00000064390	ProperStrand	164	1	-8.7865
chr2	172709255	172709315	protein_coding	Bmp7	intron	ENSMUSG00000008999	ProperStrand	22	chr4	131908356	131908439	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	6	-17.1806
chr9	15119344	15119425	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	chr13	49779667	49779805	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	4	-1.9869
chr1	18204299	18204315	pseudogene	Defb44-ps	.	ENSMUSG00000070977	ProperStrand	37	chr6	71832629	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-6.5659
chr5	141098795	141098826	protein_coding	Ttyh3	utr3	ENSMUSG00000036565	ProperStrand	22	chr10	23505152	23505204	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.8416
chr4	51524704	51524721	LINE	Lx9	L1	chr4Lx951524640	ProperStrand	1	chr16	23110455	23110507	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-inf
chr18	20120696	20120714	protein_coding	Dsc3	utr3	ENSMUSG00000059898	ProperStrand	31	chr13	23654053	23654185	protein_coding	Hist1h3e	exon	ENSMUSG00000069273	ProperStrand	30	1	-16.0723
chr2	26493479	26493518	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr6	81992905	81992921	protein_coding	Fam176a	intron	ENSMUSG00000035104	ProperStrand	64	1	-6.0674
chr14	34206134	34206150	protein_coding	Mapk8	exon	ENSMUSG00000021936	NonProperStrand	8	chr3	108714330	108714453	protein_coding	Prpf38b	utr5	ENSMUSG00000027881	ProperStrand	23	1	-18.5844
chr9	44883154	44883180	protein_coding	Mpzl3	utr3	ENSMUSG00000070305	ProperStrand	3	chr16	23110528	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-8.5395
chr4	115484059	115484075	protein_coding	Atpaf1	utr3	ENSMUSG00000028710	ProperStrand	202	chr12	106269284	106269384	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	2	-3.5954
chr4	43505655	43505930	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr12	106269284	106269534	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	39	-1.4110
chr7	3182166	3182256	SINE	B2_Mm2	B2	chr7B2_Mm23182154	NonProperStrand	1	chr7	3182398	3182478	SINE	RSINE1	B4	chr7RSINE13182406	ProperStrand	1	1	-inf
chr11	107554990	107555044	protein_coding	Helz	utr3	ENSMUSG00000020721	ProperStrand	60	chr4	131908236	131908272	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.4187
chr16	79806741	79806760	LINE	L1_Mur3	L1	chr16L1_Mur379806735	NonProperStrand	1	chr16	23110454	23110506	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-inf
chr4	151701591	151701661	protein_coding	Rpl22	exon	ENSMUSG00000028936	ProperStrand	112	chr7	67123696	67123728	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	2	-13.1996
chr14	63225036	63225053	protein_coding	Fam124a	exon	ENSMUSG00000035184	NonProperStrand	5	chr17	35089182	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-10.6035
chr4	129775450	129775467	protein_coding	Col16a1	exon	ENSMUSG00000040690	ProperStrand	21	chr11	116938618	116938718	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-8.2619
chr4	134896496	134896794	protein_coding	Srrm1	exon	ENSMUSG00000028809	ProperStrand	142	chr1	137271110	137271126	protein_coding	Shisa4	exon	ENSMUSG00000041889	ProperStrand	64	1	-11.4543
chr18	25582338	25582457	protein_coding	AW554918	intron	ENSMUSG00000033632	ProperStrand	23	chr16	23110969	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.4133
chr5	108333608	108333665	snoRNA	ENSMUSG00000064453_Snord21	.	ENSMUSG00000064453	ProperStrand	201	chr9	15119648	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-1.6901
chr7	52713541	52713601	protein_coding	Ftl1	exon	ENSMUSG00000050708	ProperStrand	807	chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	1	-3.5395
chr10	79499937	79500068	protein_coding	Polr2e	exon	ENSMUSG00000004667	ProperStrand	37	chr18	9351369	9351387	protein_coding	Ccny	intron	ENSMUSG00000024286	NonProperStrand	7	5	-19.7803
chr15	99548653	99548669	protein_coding	Gpd1	exon	ENSMUSG00000023019	ProperStrand	40	chr4	131865460	131865488	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-4.7765
chr14	76247936	76247957	protein_coding	Tpt1	utr3	ENSMUSG00000060126	ProperStrand	236	chr7	116664809	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	4	-3.2992
chr14	24991390	24991414	protein_coding	Dlg5	exon	ENSMUSG00000021782	ProperStrand	46	chr18	35716700	35716761	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-4.6058
chr2	25105521	25107254	protein_coding	Ndor1	exon	ENSMUSG00000006471	NonProperStrand	84	chr18	35716697	35716725	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.6375
chr9	30876614	30876664	protein_coding	Zbtb44	utr3	ENSMUSG00000047412	ProperStrand	68	chr15	79913288	79913319	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-3.3623
chr14	79880925	79880942	protein_coding	Wbp4	utr5	ENSMUSG00000022023	ProperStrand	9	chr1	82379639	82379687	protein_coding	Rhbdd1	intron	ENSMUSG00000026142	ProperStrand	22	1	-19.2845
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr5	108336425	108336492	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-0.9283
chrX	130215915	130215931	protein_coding	Pcdh19	exon	ENSMUSG00000051323	ProperStrand	3	chr4	149620829	149621562	protein_coding	Eno1	exon	ENSMUSG00000063524	ProperStrand	432	1	-15.7627
chr19	21753122	21753172	protein_coding	Fam108b	exon	ENSMUSG00000047368	ProperStrand	5	chr7	150717298	150717367	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	2	-17.0493
chr8	74877972	74878062	protein_coding	Eps15l1	intron	ENSMUSG00000006276	ProperStrand	42	chr9	67819810	67819853	protein_coding	Vps13c	exon	ENSMUSG00000035284	ProperStrand	69	1	-13.7544
chr5	130577975	130578071	protein_coding	Tpst1	exon	ENSMUSG00000034118	ProperStrand	22	chr16	23110456	23110520	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	6	-20.0691
chr10	24494693	24494744	protein_coding	Enpp3	exon	ENSMUSG00000019989	ProperStrand	6	chr7	117189955	117190045	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-12.9471
chr7	87435095	87435182	protein_coding	Vps33b	intron	ENSMUSG00000030534	ProperStrand	13	chr5	151355526	151355576	protein_coding	Brca2	exon	ENSMUSG00000041147	ProperStrand	75	1	-16.0015
chr18	34532113	34532879	protein_coding	Reep5	exon	ENSMUSG00000005873	ProperStrand	19	chr7	116663713	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	5	-20.0547
chr12	11175027	11175045	LTR	LTR81A	ERV1?	chr12LTR81A11175014	NonProperStrand	3	chr17	46709507	46709597	protein_coding	Ptk7	exon	ENSMUSG00000023972	ProperStrand	101	3	-inf
chr17	39979948	39980016	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr11	59025354	59025377	protein_coding	Arf1	utr3	ENSMUSG00000048076	ProperStrand	52	1	-7.5086
chr4	133163204	133163304	protein_coding	Zdhhc18	utr3	ENSMUSG00000037553	ProperStrand	51	chr19	8799835	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	9	-19.8702
chr18	80637789	80637820	protein_coding	Ctdp1	intron	ENSMUSG00000033323	ProperStrand	69	chrX	34622906	34622991	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-5.0641
mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr9	120038466	120038675	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	19	-2.3657
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr15	81872636	81872719	protein_coding	Nhp2l1	exon	ENSMUSG00000063480	ProperStrand	40	1	-7.1752
chr2	26493394	26493474	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr19	25016725	25016791	snoRNA	ENSMUSG00000064896_SNORA19	.	ENSMUSG00000064896	ProperStrand	88	1	-3.0431
chr19	8782455	8782517	protein_coding	Slc3a2	exon	ENSMUSG00000010095	ProperStrand	63	chr11	107944585	107944602	protein_coding	Prkca	intron	ENSMUSG00000050965	ProperStrand	48	1	-13.6666
chr11	87913128	87913145	processed_transcript	2210416O15Rik	.	ENSMUSG00000087498	ProperStrand	76	chr2	28760171	28760252	protein_coding	Ddx31	exon	ENSMUSG00000026806	ProperStrand	8	1	-16.8227
chr1	166186979	166195164	protein_coding	Slc19a2	utr3	ENSMUSG00000040918	ProperStrand	22	chr4	131908689	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-4.9672
chr1	162967114	162967175	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	chr18	35714193	35714290	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	8	-5.9914
chr5	115939485	115939587	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr8	32260335	32260373	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	10	-10.6540
chr3	141905018	141905108	protein_coding	Pdlim5	utr3	ENSMUSG00000028273	ProperStrand	17	chr18	33954818	33954897	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-5.9445
chr15	71624755	71624799	snoRNA	ENSMUSG00000088895_SNORA81	.	ENSMUSG00000088895	ProperStrand	348	chr17	35087937	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-2.0106
chrX	45475092	45475109	protein_coding	Xpnpep2	exon	ENSMUSG00000037005	ProperStrand	32	chr10	90581098	90581188	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	3	-13.9581
chr16	23111373	23111442	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	chr8	18933064	18933084	snoRNA	ENSMUSG00000088420_SNORA70	.	ENSMUSG00000088420	ProperStrand	12	1	-4.0123
chr12	105709750	105709766	protein_coding	Gsc	exon	ENSMUSG00000021095	NonProperStrand	12	chr17	23955820	23955839	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	1	-14.7645
chr15	88992486	88994455	protein_coding	Plxnb2	exon	ENSMUSG00000036606	ProperStrand	119	chr16	23110841	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	10	-4.5962
chr6	89306992	89307092	protein_coding	Plxna1	exon	ENSMUSG00000030084	ProperStrand	233	chrX	34622906	34622978	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-1.0261
chr18	63908609	63908625	protein_coding	Wdr7	intron	ENSMUSG00000040560	NonProperStrand	180	chr5	121873641	121873719	protein_coding	Naa25	exon	ENSMUSG00000042719	ProperStrand	95	1	-10.1861
chr3	88603786	88603865	pseudogene	5830417I10Rik	.	ENSMUSG00000078684	ProperStrand	68	chr10	23505190	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-2.0999
chr9	50816824	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	chr17	24857716	24857840	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-2.2470
chr4	128450890	128450980	protein_coding	Zfp362	utr3	ENSMUSG00000028799	ProperStrand	10	chr11	29398474	29398554	protein_coding	Ccdc88a	exon	ENSMUSG00000032740	ProperStrand	12	1	-21.0058
chr2	166755469	166756111	protein_coding	Cse1l	exon	ENSMUSG00000002718	ProperStrand	22	chr15	76005537	76005553	protein_coding	Plec	exon	ENSMUSG00000022565	ProperStrand	186	1	-13.0797
chr4	43505656	43505683	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr6	48693611	48693709	protein_coding	Gimap1	utr3	ENSMUSG00000090019	ProperStrand	4	1	-8.5468
chr10	117181244	117181334	protein_coding	Slc35e3	intron	ENSMUSG00000060181	ProperStrand	11	chr11	6428087	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-6.4917
chr13	69772886	69772915	protein_coding	Nsun2	utr3	ENSMUSG00000021595	ProperStrand	110	chr1	89681213	89681303	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-4.2742
chr9	64022876	64022923	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	chr13	90238602	90238702	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	1	-3.5049
chr8	13417125	13417228	protein_coding	Grk1	utr3	ENSMUSG00000031450	NonProperStrand	12	chr14	34780906	34781131	protein_coding	Zfp488	utr3	ENSMUSG00000044519	NonProperStrand	39	2	-18.9119
chr7	35983752	35983768	protein_coding	Slc7a10	exon	ENSMUSG00000030495	NonProperStrand	33	chr16	23111450	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.1725
chr1	182261853	182261869	protein_coding	Itpkb	intron	ENSMUSG00000038855	NonProperStrand	27	chr5	121655016	121655100	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.2800
chr2	144298136	144298152	pseudogene	Zfp133-ps	.	ENSMUSG00000083674	ProperStrand	5	chr9	120039622	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-8.3145
chr1	192712615	192712631	protein_coding	Rps6kc1	exon	ENSMUSG00000089872	ProperStrand	241	chr11	106362639	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-4.6819
chr17	60635846	60635862	LINE	L1VL4	L1	chr17L1VL460634566	NonProperStrand	1	chr17	39985355	39985417	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-inf
chr7	63476159	63476186	protein_coding	Herc2	intron	ENSMUSG00000030451	ProperStrand	66	chr4	131908236	131908300	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-2.4625
chr14	15572353	15572371	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr5	74489544	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-2.0054
chrX	45610105	45610123	protein_coding	Utp14a	utr5	ENSMUSG00000063785	ProperStrand	22	chr4	131865855	131865907	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.5019
chr10	110052690	110052707	LINE	L2a	L2	chr10L2a110052646	NonProperStrand	9	chr2	26494856	26494903	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	1	-10.0526
chr7	26507071	26507095	protein_coding	Hnrnpul1	utr3	ENSMUSG00000040725	ProperStrand	84	chr5	121655100	121655144	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.1314
chr3	94675027	94675100	protein_coding	Pogz	exon	ENSMUSG00000038902	ProperStrand	65	chr7	134671401	134671491	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-7.7120
chr5	123257356	123264583	protein_coding	Anapc5	exon	ENSMUSG00000029472	ProperStrand	92	chr9	65435134	65435224	protein_coding	Pif1	utr5	ENSMUSG00000041064	ProperStrand	14	3	-inf
chr19	6372204	6372376	protein_coding	Sf1	exon	ENSMUSG00000024949	ProperStrand	251	chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	1	-6.9791
chr5	20480964	20481044	SINE	B3	B2	chr5B320480835	ProperStrand	1	chr5	20481322	20481412	SINE	B4A	B4	chr5B4A20481237	NonProperStrand	1	1	-inf
chr15	98359399	98359749	protein_coding	2310037I24Rik	exon	ENSMUSG00000022992	ProperStrand	91	chr10	23505259	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-0.7221
chr4	46508137	46508157	snoRNA	ENSMUSG00000064410_SNORA36	.	ENSMUSG00000064410	ProperStrand	133	chr9	15119629	15119698	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.3647
chr5	137517730	137519030	protein_coding	Ap1s1	exon	ENSMUSG00000004849	ProperStrand	16	chr8	125418803	125418819	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	1	-12.3026
chr15	72935956	72936046	protein_coding	Eif2c2	utr3	ENSMUSG00000036698	ProperStrand	154	chr3	123210899	123210979	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-0.7546
chr17	56748316	56748416	protein_coding	2410015M20Rik	exon	ENSMUSG00000049760	ProperStrand	8	chr9	120039571	120039622	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-7.2948
chr9	4299367	4302483	protein_coding	Aasdhppt	exon	ENSMUSG00000025894	ProperStrand	121	chr15	72888669	72888734	protein_coding	Trappc9	exon	ENSMUSG00000047921	ProperStrand	44	1	-12.5309
chr17	33954884	33954974	protein_coding	Kank3	exon	ENSMUSG00000042099	ProperStrand	64	chr2	158184129	158184209	snoRNA	ENSMUSG00000064995_SNORA71	.	ENSMUSG00000064995	ProperStrand	430	7	-19.1738
chr2	158182156	158182280	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	chr5	111121066	111121194	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	6	-2.3687
chr3	121160743	121160843	protein_coding	Cnn3	utr3	ENSMUSG00000053931	ProperStrand	77	chr10	23505152	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-0.9127
chr11	29632987	29633079	protein_coding	Rtn4	intron	ENSMUSG00000020458	ProperStrand	117	chr16	23111777	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-4.4947
chr9	40612575	40612613	protein_coding	Hspa8	exon	ENSMUSG00000015656	NonProperStrand	3	chr2	26493371	26493471	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	NonProperStrand	10	1	-inf
chr17	27700433	27700533	protein_coding	Hmga1	utr3	ENSMUSG00000046711	ProperStrand	180	chr14	76247817	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	27	-20.5748
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr12	87030317	87049503	protein_coding	Batf	exon	ENSMUSG00000034266	ProperStrand	28	1	-7.4204
chr1	162136748	162136811	protein_coding	Cacybp	exon	ENSMUSG00000014226	ProperStrand	39	chr4	131866155	131866245	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-7.4699
chr17	24238578	24238668	protein_coding	Pdpk1	exon	ENSMUSG00000024122	ProperStrand	18	chr8	32260340	32260420	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-7.0098
chr12	102594088	102594168	SINE	ID_B1	B4	chr12ID_B1102594099	NonProperStrand	1	chr12	102831632	102831722	protein_coding	Catsperb	intron	ENSMUSG00000047014	NonProperStrand	2	1	-inf
chrX	71589879	71589895	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr11	115935746	115937022	protein_coding	Unc13d	exon	ENSMUSG00000057948	ProperStrand	89	1	-9.3575
chr10	128114784	128114813	protein_coding	Rab5b	utr3	ENSMUSG00000000711	ProperStrand	14	chr11	97642952	97643078	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-5.1980
chrX	147753632	147753651	pseudogene	Wnk3-ps	.	ENSMUSG00000041245	ProperStrand	21	chr3	108357255	108357355	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-6.6051
chr19	4907473	4907549	protein_coding	Dpp3	utr3	ENSMUSG00000063904	ProperStrand	36	chr11	83107806	83107896	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	1	-9.8646
chr15	98762003	98762103	protein_coding	Tuba1b	utr3	ENSMUSG00000023004	ProperStrand	32	chr17	35089182	35089210	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-6.7280
chr3	95544170	95545272	protein_coding	Tars2	exon	ENSMUSG00000028107	ProperStrand	26	chr2	156022517	156049073	protein_coding	Phf20	utr5	ENSMUSG00000038116	ProperStrand	60	8	-20.7011
chr4	106327417	106327434	protein_coding	Pars2	utr3	ENSMUSG00000043572	NonProperStrand	13	chr5	108336363	108336490	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-7.9357
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr18	77913045	77913062	protein_coding	8030462N17Rik	exon	ENSMUSG00000047466	NonProperStrand	21	1	-8.0023
chr17	57161788	57161842	protein_coding	Khsrp	utr3	ENSMUSG00000007670	ProperStrand	353	chr3	82816756	82816774	protein_coding	Fgg	exon	ENSMUSG00000033860	NonProperStrand	321	1	-6.4264
chr7	134674514	134674863	protein_coding	Srcap	exon	ENSMUSG00000053877	ProperStrand	69	chr18	35716835	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.9428
chr2	26493475	26493521	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr7	52958453	52958469	protein_coding	Car11	exon	ENSMUSG00000003273	NonProperStrand	250	1	-3.4645
chr15	76911610	76936064	protein_coding	Rbfox2	exon	ENSMUSG00000033565	ProperStrand	55	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-0.9304
chr4	138921283	138921485	protein_coding	C230096C10Rik	exon	ENSMUSG00000078517	ProperStrand	69	chr11	62416980	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-5.7685
chr1	185857228	185857244	protein_coding	1700056E22Rik	exon	ENSMUSG00000044854	ProperStrand	173	chr1	162966813	162966868	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-4.2091
chr4	82114659	82114675	protein_coding	Nfib	intron	ENSMUSG00000008575	ProperStrand	50	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-12.0532
chr4	149026816	149026832	protein_coding	Pik3cd	exon	ENSMUSG00000039936	ProperStrand	151	chr11	106362638	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-5.5842
chrX	71517821	71517903	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	chr7	52382234	52382288	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	4	-7.2880
chr15	80064960	80064977	protein_coding	Smcr7l	utr5	ENSMUSG00000022412	NonProperStrand	4	chr15	98763589	98764799	protein_coding	Tuba1b	exon	ENSMUSG00000023004	ProperStrand	32	1	-19.2592
chr7	123381144	123381162	protein_coding	Plekha7	utr5	ENSMUSG00000045659	ProperStrand	66	chr3	68889148	68889211	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-3.0848
mmu-miR-6238	2	19	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr16	23109041	23109090	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-4.5716
chr4	109619432	109619504	protein_coding	Faf1	intron	ENSMUSG00000010517	ProperStrand	29	chr9	120039581	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-4.6899
chr7	4745770	4746026	protein_coding	Rpl28	exon	ENSMUSG00000030432	ProperStrand	220	chr4	10801958	10801974	protein_coding	2610301B20Rik	intron	ENSMUSG00000059482	ProperStrand	3	1	-17.2234
chr2	158182156	158182256	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	chr4	3762228	3762293	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	1	-1.6165
chr3	96654255	96654271	protein_coding	Pdzk1	exon	ENSMUSG00000038298	ProperStrand	101	chr4	131908416	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.7531
chr16	32245237	32245294	protein_coding	Fbxo45	intron	ENSMUSG00000035764	ProperStrand	19	chr17	24665481	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-7.2209
chr1	89377777	89377793	protein_coding	Ngef	exon	ENSMUSG00000026259	NonProperStrand	41	chr8	73419657	73419742	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.8312
chr5	74489220	74489300	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr11	72261373	72261536	protein_coding	Mybbp1a	exon	ENSMUSG00000040463	ProperStrand	279	1	-2.7452
chr18	3267739	3267757	protein_coding	Crem	utr3	ENSMUSG00000063889	NonProperStrand	3	chr15	79908939	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-11.7928
chr12	113418084	113418100	protein_coding	Kif26a	exon	ENSMUSG00000021294	NonProperStrand	4	chr16	11144176	11144276	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	1	-16.1302
chr10	90432660	90432676	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	chr7	133972933	133972949	protein_coding	Fam57b	exon	ENSMUSG00000058966	NonProperStrand	12	1	-13.9026
chr15	77599357	77599374	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr7	52382237	52382314	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-3.8937
chr5	34112034	34112050	protein_coding	Letm1	exon	ENSMUSG00000005299	NonProperStrand	145	chr11	106362328	106362381	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-4.1413
chr4	154964506	154964606	protein_coding	Nadk	utr3	ENSMUSG00000029063	ProperStrand	25	chr7	150717298	150717421	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	6	-inf
chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	chr11	55296277	55296335	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-2.6734
chr11	120456319	120456354	protein_coding	Alyref	exon	ENSMUSG00000025134	ProperStrand	53	chr7	52714459	52714549	protein_coding	Ftl1	exon	ENSMUSG00000050708	ProperStrand	807	1	-8.3651
chr7	19666549	19666568	protein_coding	Dmwd	exon	ENSMUSG00000030410	NonProperStrand	10	chr18	35714144	35714262	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-6.9619
chr3	32607684	32610806	protein_coding	Actl6a	utr5	ENSMUSG00000027671	ProperStrand	31	chr11	62416631	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	3	-14.8282
chr5	122304436	122304453	protein_coding	Fam109a	utr3	ENSMUSG00000044134	ProperStrand	12	chr5	121655067	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-11.2462
chr17	56748287	56748387	protein_coding	2410015M20Rik	exon	ENSMUSG00000049760	ProperStrand	8	chr10	23505151	23505195	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-11.9038
mmu-miR-6240	2	23	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr3	96364578	96365593	protein_coding	Txnip	utr3	ENSMUSG00000038393	ProperStrand	172	3	-9.4616
chr18	35098305	35107792	protein_coding	Hspa9	exon	ENSMUSG00000024359	ProperStrand	166	chr5	121655063	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-3.5610
chr14	70174967	70175918	protein_coding	Tnfrsf10b	exon	ENSMUSG00000022074	ProperStrand	57	chr5	65952377	65952395	protein_coding	Ube2k	intron	ENSMUSG00000029203	ProperStrand	289	1	-10.2655
chr7	70700008	70700025	protein_coding	Otud7a	intron	ENSMUSG00000033510	ProperStrand	16	chr9	15119677	15119714	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.1098
chr5	29959297	29962190	protein_coding	Ube3c	exon	ENSMUSG00000039000	ProperStrand	48	chr7	67125777	67125826	snoRNA	ENSMUSG00000089375_Snord107	.	ENSMUSG00000089375	ProperStrand	451	1	-9.7230
chr1	168239525	168239541	protein_coding	Ildr2	exon	ENSMUSG00000040612	ProperStrand	103	chr19	9052470	9052486	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	1	-8.3826
chr19	34392966	34392986	protein_coding	Fas	intron	ENSMUSG00000024778	ProperStrand	11	chr5	108336363	108336409	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-8.2822
chr11	119331141	119331241	protein_coding	Rnf213	intron	ENSMUSG00000070327	ProperStrand	20	chr7	118219574	118219628	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	5	-19.9708
chr19	7502333	7502350	protein_coding	Rtn3	exon	ENSMUSG00000024758	NonProperStrand	30	chr19	8798765	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-6.1598
chr11	98568980	98568998	protein_coding	Med24	exon	ENSMUSG00000017210	NonProperStrand	8	chr5	108334195	108334267	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-8.8896
chr10	117218403	117218457	protein_coding	Nup107	exon	ENSMUSG00000052798	ProperStrand	14	chr11	69481383	69481473	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-6.0079
chr6	54996430	54996469	protein_coding	Gars	exon	ENSMUSG00000029777	ProperStrand	71	chr1	155287324	155287354	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	1	-8.6419
chr10	113423062	113423082	LINE	Lx7	L1	chr10Lx7113422215	NonProperStrand	1	chr17	24856681	24856771	antisense	Snhg9	.	ENSMUSG00000090101	ProperStrand	218	1	-inf
chr5	151572381	151572471	protein_coding	Pds5b	exon	ENSMUSG00000034021	ProperStrand	21	chr15	72812250	72812330	protein_coding	Trappc9	intron	ENSMUSG00000047921	ProperStrand	44	1	-16.0772
chr6	85287186	85287540	protein_coding	Rab11fip5	exon	ENSMUSG00000051343	ProperStrand	16	chr11	97642952	97643021	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-8.2175
chr9	38530006	38530165	protein_coding	Vwa5a	exon	ENSMUSG00000023186	ProperStrand	9	chr16	23110916	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-11.2656
chr1	71341491	71341508	protein_coding	Abca12	exon	ENSMUSG00000050296	NonProperStrand	143	chr1	89673568	89673711	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	4	-6.9951
chr6	134780323	134780339	protein_coding	Crebl2	utr5	ENSMUSG00000032652	ProperStrand	41	chr2	26494765	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.8070
chr7	30074412	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr2	31924012	31924028	protein_coding	Fam78a	utr3	ENSMUSG00000050592	NonProperStrand	340	1	-6.9693
chr7	52958453	52958469	protein_coding	Car11	exon	ENSMUSG00000003273	NonProperStrand	250	chr13	51740751	51740799	protein_coding	Cks2	utr5	ENSMUSG00000062248	ProperStrand	26	1	-12.1431
chr6	70098720	70098737	LTR	MTEa	MaLR	chr6MTEa70098663	ProperStrand	30	chr4	131908753	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.2894
chr14	33100203	33100265	protein_coding	Parg	intron	ENSMUSG00000021911	ProperStrand	33	chr8	87525135	87525238	protein_coding	Hook2	exon	ENSMUSG00000052566	ProperStrand	204	1	-12.0671
chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	chr9	114422528	114422575	protein_coding	Trim71	exon	ENSMUSG00000079259	ProperStrand	162	1	-7.5058
chr15	82015858	82022684	protein_coding	Srebf2	exon	ENSMUSG00000022463	ProperStrand	592	chr7	67125786	67125825	snoRNA	ENSMUSG00000089375_Snord107	.	ENSMUSG00000089375	ProperStrand	451	2	-7.8672
chr8	86451010	86463555	protein_coding	Lphn1	intron	ENSMUSG00000013033	ProperStrand	221	chr16	23110852	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	16	-4.5720
chr12	110888433	110888955	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr19	8963084	8963136	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	6	-1.1410
chr5	100855902	100855943	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr2	158182155	158182280	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	4	-1.3245
chr9	40104470	40104530	protein_coding	Gramd1b	utr3	ENSMUSG00000040111	ProperStrand	40	chr1	162966853	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-7.0642
chr16	32630825	32630915	protein_coding	Tfrc	utr3	ENSMUSG00000022797	ProperStrand	71	chr3	133140447	133140500	protein_coding	Tet2	intron	ENSMUSG00000040943	ProperStrand	192	1	-10.6417
chr12	85350481	85350499	protein_coding	Acot1	utr5	ENSMUSG00000072949	ProperStrand	72	chr19	8800358	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-3.1971
chr11	62366058	62366108	protein_coding	Ubb	exon	ENSMUSG00000019505	ProperStrand	32	chr17	35299511	35299611	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-6.0072
chr11	78214291	78214307	antisense	Gm11194	.	ENSMUSG00000085747	ProperStrand	35	chr2	23011328	23011344	protein_coding	Mastl	exon	ENSMUSG00000026779	ProperStrand	60	2	-inf
chr8	74008400	74008417	protein_coding	Ano8	exon	ENSMUSG00000034863	NonProperStrand	171	chr1	59748785	59748835	snoRNA	ENSMUSG00000077345_Snord70	.	ENSMUSG00000077345	ProperStrand	61	1	-11.1785
chr17	85482653	85489599	protein_coding	Prepl	utr5	ENSMUSG00000024127	ProperStrand	106	chr2	181057133	181057149	protein_coding	Rtel1	exon	ENSMUSG00000038685	ProperStrand	22	2	-20.3261
chr13	106872044	106872062	LINE	L1Md_F2	L1	chr13L1Md_F2106872035	NonProperStrand	2	chrX	34622906	34623022	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-inf
chr11	59025353	59025403	protein_coding	Arf1	utr3	ENSMUSG00000048076	ProperStrand	52	chr5	121655016	121655064	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	3	-9.7933
chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr3	88709339	88709355	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-1.0750
chr2	131060035	131064510	protein_coding	Mavs	utr5	ENSMUSG00000037523	ProperStrand	6	chr3	88715215	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-11.9801
chr11	114652601	114652689	protein_coding	Btbd17	utr3	ENSMUSG00000000202	ProperStrand	1	chr5	130300477	130300510	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-inf
chr10	127798353	127798400	protein_coding	Cs	utr3	ENSMUSG00000005683	ProperStrand	63	chrX	34622906	34622981	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	8	-inf
chr4	133872367	133872384	protein_coding	Trim63	exon	ENSMUSG00000028834	NonProperStrand	5	chr19	8963128	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-7.1260
chr4	85016349	85016366	protein_coding	Sh3gl2	intron	ENSMUSG00000028488	NonProperStrand	313	chr11	106362304	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	3	-7.0773
chr16	15287927	15287943	LINE	L1_Mus3	L1	chr16L1_Mus315286550	ProperStrand	2	chr1	129692190	129692211	protein_coding-noncoding	Ccnt2	utr5	ENSMUSG00000026349	ProperStrand	3	1	-inf
chr7	133646721	133646790	protein_coding	Atxn2l	utr5	ENSMUSG00000032637	ProperStrand	219	chr7	52381972	52382007	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-4.1986
chr11	62416575	62416598	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr4	131826037	131826127	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	5	-18.6770
chr10	21555501	21555517	lincRNA	Gm6846	intron	ENSMUSG00000085422	ProperStrand	43	chr18	75160711	75160728	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	1	-9.8582
chrX	113862552	113862571	LINE	L1VL4	L1	chrXL1VL4113861390	ProperStrand	23	chr19	10681361	10681461	protein_coding	Ddb1	exon	ENSMUSG00000024740	ProperStrand	304	9	-19.2619
chr15	99461555	99461576	protein_coding	Racgap1	exon	ENSMUSG00000023015	ProperStrand	47	chr5	121655052	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	4	-13.5867
chr9	79618624	79618661	protein_coding	Tmem30a	utr3	ENSMUSG00000032328	ProperStrand	90	chr1	162966831	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	3	-12.7151
chr11	106362341	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	chr5	23358038	23358081	snoRNA	ENSMUSG00000093321_Snord93	.	ENSMUSG00000093321	ProperStrand	218	2	-5.7686
chr1	182497144	182497163	LTR	MTE2a	MaLR	chr1MTE2a182497134	ProperStrand	2	chr7	150717331	150717352	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-12.9258
chr12	88488443	88496424	protein_coding	Pomt2	exon	ENSMUSG00000034126	NonProperStrand	331	chr10	90581238	90581282	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-1.7682
chr17	46546162	46546680	protein_coding	Zfp318	exon	ENSMUSG00000015597	ProperStrand	44	chr10	105010980	105010997	protein_coding	Tmtc2	utr5	ENSMUSG00000036019	ProperStrand	72	1	-13.5767
chrX	104128298	104128315	protein_coding	Lpar4	utr3	ENSMUSG00000049929	ProperStrand	1	chr4	128264087	128265358	protein_coding	Zscan20	exon	ENSMUSG00000061894	ProperStrand	6	1	-inf
chr12	71347267	71347283	protein_coding	Trim9	utr3	ENSMUSG00000021071	NonProperStrand	75	chr6	131330347	131330411	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	ProperStrand	408	1	-9.0265
chr8	3946439	3946519	protein_coding	Cd209c	utr5	ENSMUSG00000040165	ProperStrand	10	chrX	34622931	34623021	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-10.9061
chr9	99483993	99484009	protein_coding	Dbr1	exon	ENSMUSG00000032469	ProperStrand	162	chr17	13184995	13185014	protein_coding	Wtap	utr5	ENSMUSG00000060475	ProperStrand	119	1	-9.9456
chr11	68886963	68887037	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	chr8	113366286	113366357	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	1	-0.8114
chr13	55348018	55348082	protein_coding	Nsd1	exon	ENSMUSG00000021488	ProperStrand	186	chr7	148634787	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-1.9925
chr6	108558153	108558169	lincRNA	0610040F04Rik	intron	ENSMUSG00000087341	NonProperStrand	4	chr4	122970392	122970453	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-13.0811
chr13	23636346	23636414	protein_coding	Hist1h3f	utr5	ENSMUSG00000059309	ProperStrand	26	chr2	63936036	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-9.5452
chr3	115617993	115618010	protein_coding	Dph5	exon	ENSMUSG00000033554	NonProperStrand	7	chr16	23111389	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	5	-19.9956
chr15	5068411	5068478	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	chr13	49779702	49779802	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-0.7110
chr15	89304166	89304183	protein_coding	Arsa	exon	ENSMUSG00000022620	NonProperStrand	1	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-inf
chr9	44196905	44196921	protein_coding	Hyou1	exon	ENSMUSG00000032115	ProperStrand	145	chr4	131865866	131865987	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.3147
chr7	87658162	87658279	protein_coding	Blm	exon	ENSMUSG00000030528	ProperStrand	35	chr16	23110859	23110885	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.8578
chr3	87718935	87719016	protein_coding	Hdgf	utr3	ENSMUSG00000004897	ProperStrand	117	chr17	13112529	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-3.3302
chr7	111382824	111382840	protein_coding	Trim6	utr3	ENSMUSG00000072244	NonProperStrand	1	chr4	131865396	131865486	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-inf
chr12	111929646	111932510	protein_coding	Hsp90aa1	utr3	ENSMUSG00000021270	ProperStrand	751	chr19	8800389	8800479	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	3	-0.8540
chr5	135932919	135932935	protein_coding	Hip1	exon	ENSMUSG00000039959	ProperStrand	30	chr16	23111703	23111808	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-5.3499
chr12	12298261	12298289	protein_coding	Fam49a	intron	ENSMUSG00000020589	ProperStrand	7	chr16	23110968	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.4785
chr9	43945155	43945353	protein_coding	Mcam	exon	ENSMUSG00000032135	ProperStrand	27	chr10	127647551	127647631	protein_coding	Spryd4	utr3	ENSMUSG00000051346	ProperStrand	3	1	-inf
chr8	125006308	125006372	protein_coding	Fam38a	exon	ENSMUSG00000014444	ProperStrand	132	chr5	120935305	120935387	protein_coding	Plbd2	utr3	ENSMUSG00000029598	ProperStrand	22	2	-19.3768
chr1	91358413	91785998	protein_coding	Agap1	intron	ENSMUSG00000055013	ProperStrand	229	chr4	131865853	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	9	-7.3209
chr8	44381451	44381502	protein_coding	Zfp42	exon	ENSMUSG00000051176	ProperStrand	127	chr19	48282263	48282280	protein_coding	Sorcs3	intron	ENSMUSG00000063434	NonProperStrand	43	1	-12.4812
chr9	65049532	65049622	snRNA	ENSMUSG00000075930_U5	.	ENSMUSG00000075930	ProperStrand	175	chr10	23505148	23505268	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	16	-17.5496
chr17	23943940	23944030	protein_coding	Srrm2	exon	ENSMUSG00000039218	ProperStrand	521	chr7	116663666	116663746	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	5	-1.4720
chr7	106631094	106631119	protein_coding	Rps3	exon	ENSMUSG00000030744	ProperStrand	159	chr11	69483136	69483213	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-1.9563
chr4	34630709	34634548	protein_coding	Slc35a1	utr5	ENSMUSG00000028293	ProperStrand	9	chr19	27837820	27837836	protein_coding	Rfx3	utr3	ENSMUSG00000040929	ProperStrand	92	1	-16.3263
chr9	49253939	49254684	protein_coding	Ttc12	exon	ENSMUSG00000040219	ProperStrand	5	chr17	24857784	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-7.1522
chr4	126592563	126592832	protein_coding	Zmym4	exon	ENSMUSG00000042446	NonProperStrand	1	chr9	15119631	15119712	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-inf
chrX	67458741	67458757	LINE	Lx8	L1	chrXLx867458264	NonProperStrand	35	chr1	9932550	9932573	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-8.8113
chr17	46961905	46961972	protein_coding	BC032203	exon	ENSMUSG00000036568	ProperStrand	64	chr9	120037948	120037979	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	2	-7.6112
chr1	96232656	96232674	LTR	RLTR17	ERVK	chr1RLTR1796232328	ProperStrand	1	chr11	106362557	106362618	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-inf
chr8	87211658	87211715	protein_coding	Nacc1	utr5	ENSMUSG00000001910	ProperStrand	130	chr11	67005924	67005940	protein_coding	Myh2	exon	ENSMUSG00000033196	ProperStrand	66	1	-11.5688
chr6	88456772	88456808	protein_coding	Sec61a1	exon	ENSMUSG00000030082	ProperStrand	46	chr18	35716786	35716878	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.6197
chr8	67206659	67206677	protein_coding	Sc4mol	utr5	ENSMUSG00000031604	ProperStrand	24	chr2	22444171	22444236	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-9.6231
chr6	93667261	93695513	protein_coding	Magi1	exon	ENSMUSG00000045095	ProperStrand	106	chrX	34622938	34623018	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-2.1852
chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	chr19	46836213	46836229	protein_coding	Cnnm2	utr5	ENSMUSG00000064105	NonProperStrand	19	1	-10.4848
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr10	49445374	49445394	protein_coding	Grik2	intron	ENSMUSG00000056073	ProperStrand	8	1	-11.1491
chr10	120709244	120712786	protein_coding	Tbc1d30	exon	ENSMUSG00000052302	ProperStrand	233	chr8	113095780	113095797	protein_coding	Hydin	exon	ENSMUSG00000059854	ProperStrand	47	1	-11.0852
chr14	21276175	21276194	protein_coding	Anxa7	intron	ENSMUSG00000021814	NonProperStrand	6	chr16	23111757	23111811	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-10.4591
chr7	61489126	61489206	LINE	Lx9	L1	chr7Lx961489110	ProperStrand	1	chr7	62107116	62107206	protein_coding	Luzp2	intron	ENSMUSG00000063297	ProperStrand	4	1	-inf
chr7	51503471	51503548	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	chr2	130101986	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-1.2517
chr7	146056630	146056730	protein_coding	Ppp2r2d	intron	ENSMUSG00000041769	ProperStrand	62	chr18	33954917	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-3.4452
chrX	20250093	20252751	protein_coding	Uba1	exon	ENSMUSG00000001924	ProperStrand	156	chr7	139833256	139834171	protein_coding	Lhpp	exon	ENSMUSG00000030946	ProperStrand	35	1	-12.4854
chr10	51981595	51981685	protein_coding	Dcbld1	exon	ENSMUSG00000019891	ProperStrand	21	chr9	120039540	120039620	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-5.3228
chr15	79254723	79254745	protein_coding-noncoding	Csnk1e	utr3	ENSMUSG00000022433	ProperStrand	1	chr2	26494708	26494772	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-inf
chr3	34549888	34549988	protein_coding	Sox2	exon	ENSMUSG00000074637	ProperStrand	299	chr1	162965994	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-1.0116
chr2	26493422	26494862	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr7	150717298	150717425	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	8	-4.9202
chr10	90579860	90580003	protein_coding	Slc25a3	exon	ENSMUSG00000061904	ProperStrand	74	chr17	35089182	35089222	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	3	-11.9392
chr7	75174933	75174951	protein_coding	Igf1r	intron	ENSMUSG00000005533	ProperStrand	121	chr19	8799021	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-4.4743
chr8	97374125	97374479	protein_coding	Coq9	exon	ENSMUSG00000031782	ProperStrand	6	chr9	15119733	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-7.1405
chr2	180610252	180610270	lincRNA	Gm14342	intron	ENSMUSG00000086166	NonProperStrand	18	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-11.3672
chr12	119301895	119301912	protein_coding	Dnahc11	intron	ENSMUSG00000018581	ProperStrand	65	chr11	6428108	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.0482
chr11	118305719	118305735	protein_coding	C1qtnf1	intron	ENSMUSG00000017446	ProperStrand	52	chr5	125514775	125514815	protein_coding	Ncor2	exon	ENSMUSG00000029478	ProperStrand	377	1	-9.9195
chr13	58492876	58492922	protein_coding	Hnrnpk	utr3	ENSMUSG00000021546	ProperStrand	117	chr8	48591007	48591107	protein_coding	D030016E14Rik	exon	ENSMUSG00000038102	ProperStrand	15	1	-14.7974
chr11	120648816	120648906	protein_coding-noncoding	Gps1	utr5	ENSMUSG00000025156	NonProperStrand	1	chr11	120649021	120649101	protein_coding	Gps1	exon	ENSMUSG00000025156	NonProperStrand	3	1	-inf
chr18	75529097	75529143	protein_coding	Smad7	exon	ENSMUSG00000025880	ProperStrand	83	chr9	4299367	4302483	protein_coding	Aasdhppt	exon	ENSMUSG00000025894	ProperStrand	121	1	-11.2519
chr1	88253990	88254736	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chr11	120208396	120208444	protein_coding	Actg1	exon	ENSMUSG00000062825	ProperStrand	178	8	-18.8737
chr5	115553191	115553217	pseudogene	Gm13826	.	ENSMUSG00000072692	ProperStrand	1	chr16	23110507	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-inf
chr2	163428098	163428114	protein_coding	Ttpal	utr5	ENSMUSG00000017679	NonProperStrand	3	chr17	68083087	68083103	protein_coding	Lama1	intron	ENSMUSG00000032796	NonProperStrand	26	1	-20.0435
chr3	96218592	96218692	misc_RNA	Telomerase-vert	.	ENSMUSG00000064796	ProperStrand	443	chr1	88247742	88247802	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	3	-4.4886
chr18	61715365	61715383	protein_coding	Csnk1a1	utr5	ENSMUSG00000024576	NonProperStrand	35	chr14	35558955	35559003	protein_coding	Wapal	utr3	ENSMUSG00000041408	ProperStrand	93	1	-13.5214
chr13	101541067	101541088	protein_coding	Cenph	intron	ENSMUSG00000045273	NonProperStrand	45	chr1	162966813	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-6.8294
chr13	8766311	8766340	protein_coding	Adarb2	utr3	ENSMUSG00000052551	NonProperStrand	61	chr11	69731189	69731479	protein_coding	Eif5a	exon	ENSMUSG00000078812	ProperStrand	164	4	-20.4851
chr11	106852095	106852391	protein_coding	Kpna2	exon	ENSMUSG00000018362	ProperStrand	70	chr18	35716832	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.9199
chr9	40612117	40612164	snoRNA	ENSMUSG00000075924_Snord14d	.	ENSMUSG00000075924	ProperStrand	131	chr3	123210893	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-3.0601
chr14	19044810	19044875	protein_coding	Nr1d2	intron	ENSMUSG00000021775	ProperStrand	33	chr10	23505157	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	7	-16.1398
chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	chr1	165917101	165917132	protein_coding	BC055324	exon	ENSMUSG00000041406	ProperStrand	35	1	-9.2627
chr10	88684309	88684329	protein_coding	Ano4	intron	ENSMUSG00000035189	NonProperStrand	13	chr5	115940316	115940408	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	9	-inf
chr2	32817318	32817340	protein_coding	Rpl12	utr5	ENSMUSG00000038900	ProperStrand	167	chr11	120207411	120207463	protein_coding	Actg1	utr3	ENSMUSG00000062825	ProperStrand	178	1	-9.0800
chr9	15130704	15130749	snoRNA	ENSMUSG00000077506_Scarna9	.	ENSMUSG00000077506	ProperStrand	148	chr5	74489639	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-2.1820
chr7	19872707	19872797	protein_coding	Rtn2	exon	ENSMUSG00000030401	ProperStrand	5	chr3	123210898	123210978	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-6.8746
chr11	102264624	102265822	protein_coding	Slc25a39	utr3	ENSMUSG00000018677	ProperStrand	35	chr17	24857717	24857820	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-5.5824
chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	3	-8.9233
chr7	134009828	134009918	protein_coding	Taok2	utr3	ENSMUSG00000059981	ProperStrand	47	chr5	130300460	130300540	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.9365
chr17	27253019	27253202	protein_coding	Itpr3	exon	ENSMUSG00000042644	ProperStrand	137	chr17	24857754	24857834	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.0609
chr12	56959166	56959184	protein_coding	Brms1l	intron	ENSMUSG00000012076	ProperStrand	9	chr8	98164587	98164614	protein_coding	Gins3	intron	ENSMUSG00000031669	ProperStrand	1	1	-inf
chr17	75578474	75578490	protein_coding	Ltbp1	exon	ENSMUSG00000001870	ProperStrand	136	chr2	172270204	172270220	protein_coding	2410001C21Rik	exon	ENSMUSG00000027502	NonProperStrand	54	1	-11.8832
chr17	27760193	27760293	protein_coding	Nudt3	utr5	ENSMUSG00000024213	ProperStrand	26	chr7	116663704	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.0328
chr19	10704002	10704092	protein_coding	Ddb1	utr3	ENSMUSG00000024740	ProperStrand	304	chr9	120039585	120039665	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-0.8059
chr2	38280202	38280224	lincRNA	Gm13589	intron	ENSMUSG00000085950	NonProperStrand	31	chr5	74489214	74489288	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	1	-6.9303
chr10	109640049	109640066	SINE	RSINE1	B4	chr10RSINE1109639979	ProperStrand	51	chr16	23110454	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.7428
chr11	87240286	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	chr1	162966004	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-1.6311
chr5	77710062	77710131	protein_coding	Rest	exon	ENSMUSG00000029249	ProperStrand	136	chr7	116664810	116664900	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.2683
chr3	96218359	96218412	misc_RNA	Telomerase-vert	.	ENSMUSG00000064796	ProperStrand	443	chr17	24857716	24857793	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	4	-1.0148
chr15	79913288	79913321	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr12	17423550	17423628	protein_coding	Nol10	exon	ENSMUSG00000061458	ProperStrand	31	1	-4.8473
chr7	26481008	26481026	protein_coding	Tgfb1	intron	ENSMUSG00000002603	ProperStrand	17	chr7	29136558	29136580	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.6910
chr18	78016359	78016405	protein_coding	Atp5a1	exon	ENSMUSG00000025428	ProperStrand	254	chr1	162965535	162965555	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-1.9593
chr8	96556385	96560759	protein_coding	Nudt21	exon	ENSMUSG00000031754	ProperStrand	33	chr16	23110528	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-6.0263
chr4	43505719	43505799	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr3	145246415	145246505	protein_coding	Znhit6	intron	ENSMUSG00000074182	ProperStrand	12	2	-10.1415
chr13	13568656	13570477	protein_coding	Nid1	exon	ENSMUSG00000005397	ProperStrand	112	chr4	122968660	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-5.0608
chr15	82725599	82725636	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	chr4	56910495	56910613	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-1.7429
chr6	87769189	87769558	protein_coding	Isy1	exon	ENSMUSG00000030056	ProperStrand	172	chr8	44381094	44381151	protein_coding	Zfp42	exon	ENSMUSG00000051176	ProperStrand	127	1	-9.6957
chr11	53218010	53218048	protein_coding	Aff4	exon	ENSMUSG00000049470	NonProperStrand	6	chr4	122968660	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	NonProperStrand	2	1	-inf
chr10	17933816	17933832	protein_coding	Ccdc28a	utr3	ENSMUSG00000059554	NonProperStrand	14	chr2	158184114	158184196	snoRNA	ENSMUSG00000064995_SNORA71	.	ENSMUSG00000064995	ProperStrand	430	1	-12.3302
chr11	96688657	96689164	protein_coding	Nfe2l1	utr5	ENSMUSG00000038615	ProperStrand	118	chr16	23111373	23111469	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-1.8682
chr3	19882011	19882029	protein_coding	Cp	exon	ENSMUSG00000003617	NonProperStrand	2	chr16	23110891	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr11	117827952	117827983	protein_coding	Socs3	utr3	ENSMUSG00000053113	ProperStrand	137	chr9	15119337	15119425	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-3.5449
chr15	89124234	89124399	protein_coding	Sbf1	exon	ENSMUSG00000036529	ProperStrand	85	chr16	23111771	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.3785
chr8	74103347	74103437	protein_coding	Slc27a1	exon	ENSMUSG00000031808	ProperStrand	9	chr16	23110909	23110989	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-5.3337
chr10	119548244	119549790	protein_coding	Helb	exon	ENSMUSG00000020228	ProperStrand	41	chr5	3595308	3595389	protein_coding	C030048B08Rik	exon	ENSMUSG00000040302	ProperStrand	13	9	-inf
chr9	15121239	15121261	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	chr4	130305550	130305620	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	2	-10.2391
chr8	12867977	12868067	protein_coding	Atp11a	utr3	ENSMUSG00000031441	ProperStrand	635	chr12	60141405	60141485	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-2.3925
chr19	35019827	35019878	protein_coding	Kif20b	intron	ENSMUSG00000024795	ProperStrand	45	chrX	34622906	34622991	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	8	-21.0104
mmu-miR-6240	1	23	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr9	103401280	103401296	protein_coding	Tmem108	exon	ENSMUSG00000042757	NonProperStrand	323	3	-7.0765
chr11	62122558	62122638	protein_coding	Ttc19	exon	ENSMUSG00000042298	ProperStrand	21	chr4	131908243	131908333	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.1622
chr12	87865704	87865722	SINE	RSINE1	B4	chr12RSINE187865630	ProperStrand	36	chr5	121655016	121655097	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.7185
chr8	113043417	113043434	protein_coding	Hydin	intron	ENSMUSG00000059854	ProperStrand	47	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.1591
chr18	78016390	78019725	protein_coding	Atp5a1	exon	ENSMUSG00000025428	ProperStrand	254	chr11	97642954	97643034	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-1.8955
chr12	70260018	70260047	protein_coding	Rps29	utr5	ENSMUSG00000034892	ProperStrand	124	chr4	131908357	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-2.0307
chr15	81742672	81742740	protein_coding	Aco2	exon	ENSMUSG00000022477	ProperStrand	237	chr8	129468746	129468779	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-1.9681
chr19	6903662	6903742	protein_coding	Rps6ka4	utr3	ENSMUSG00000024952	ProperStrand	3	chr8	120274964	120274982	protein_coding	Hsd17b2	intron	ENSMUSG00000031844	ProperStrand	2	1	-inf
chr7	134339399	134339415	protein_coding	Cd2bp2	intron	ENSMUSG00000042502	NonProperStrand	5	chr17	24857717	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	4	-19.4831
chr13	44954999	44955076	protein_coding	Jarid2	intron	ENSMUSG00000038518	ProperStrand	372	chr11	69481246	69481572	protein_coding	Eif4a1	exon	ENSMUSG00000059796	ProperStrand	108	1	-8.4814
chr11	78214291	78214307	antisense	Gm11194	.	ENSMUSG00000085747	ProperStrand	35	chr10	86221857	86221873	protein_coding	BC030307	exon	ENSMUSG00000044937	ProperStrand	77	1	-13.9023
chr15	98604924	98606960	protein_coding	Wnt10b	exon	ENSMUSG00000022996	NonProperStrand	189	chr9	35081063	35081081	protein_coding	Rpusd4	exon	ENSMUSG00000032044	ProperStrand	9	1	-14.9030
chr4	109098941	109098957	protein_coding	Ttc39a	exon	ENSMUSG00000028555	ProperStrand	51	chr7	116663633	116663711	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.7941
chr15	76175935	76175978	protein_coding	Cyc1	exon	ENSMUSG00000022551	ProperStrand	47	chr2	118611946	118611962	protein_coding	Disp2	exon	ENSMUSG00000040035	NonProperStrand	204	1	-11.3517
chr1	170295057	170295076	protein_coding	Pbx1	intron	ENSMUSG00000052534	NonProperStrand	9	chr11	77996559	77996607	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-9.9479
chr11	23561907	23561973	protein_coding	Pex13	intron	ENSMUSG00000020283	ProperStrand	9	chr14	20902349	20902365	protein_coding	1810063B07Rik	utr5	ENSMUSG00000045107	ProperStrand	6	1	-18.9393
chr2	90235324	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	45150191	45150209	protein_coding	Kazald1	intron	ENSMUSG00000025213	NonProperStrand	1	1	-inf
chr16	32843609	32844640	protein_coding	1700021K19Rik	exon	ENSMUSG00000035629	NonProperStrand	8	chr11	83107805	83107873	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	3	-21.1576
chr7	52378845	52378864	protein_coding	Rps11	exon	ENSMUSG00000003429	NonProperStrand	1	chr14	33005139	33005231	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-inf
chr13	55987683	55987773	DNA	Tigger7	MER2_type	chr13Tigger755987678	ProperStrand	1	chrX	135745893	135745983	protein_coding	Mum1l1	utr5	ENSMUSG00000042515	NonProperStrand	1	1	-inf
chr17	31722744	31722760	protein_coding	Pknox1	intron	ENSMUSG00000006705	ProperStrand	110	chr11	62416578	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-4.0076
chr17	27769282	27771097	protein_coding	Rps10	exon	ENSMUSG00000052146	ProperStrand	94	chr10	23505149	23505201	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	6	-6.4737
chr3	135910655	135910671	protein_coding	Bank1	exon	ENSMUSG00000037922	NonProperStrand	11	chr11	77995186	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	2	-15.3288
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr15	75833782	75833799	protein_coding	Fam83h	exon	ENSMUSG00000046761	NonProperStrand	2	1	-15.4620
chr1	89001494	89001511	SINE	ID4_	ID	chr1ID4_89001463	ProperStrand	8	chr13	97949144	97949162	protein_coding	Gfm2	utr3	ENSMUSG00000021666	ProperStrand	26	1	-18.7770
chr17	75690723	75690739	protein_coding	Ltbp1	exon	ENSMUSG00000001870	ProperStrand	136	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-7.7345
chr5	30389832	30389860	protein_coding	Tyms	exon	ENSMUSG00000025747	ProperStrand	8	chr4	131865381	131865471	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-8.0307
chr5	125896696	125896790	protein_coding	Dhx37	exon	ENSMUSG00000029480	ProperStrand	15	chr1	162968489	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-8.8691
chr12	56028636	56028669	protein_coding	Baz1a	exon	ENSMUSG00000035021	ProperStrand	24	chr7	112538019	112538078	protein_coding	Fam160a2	exon	ENSMUSG00000044465	ProperStrand	85	6	-21.1311
chr4	43505656	43505724	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr6	87794041	87794099	protein_coding	Cnbp	exon	ENSMUSG00000030057	ProperStrand	46	1	-3.5548
chr2	34571877	34571924	protein_coding	Gapvd1	intron	ENSMUSG00000026867	ProperStrand	31	chr3	95980313	95980410	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	5	-19.8571
chr2	33500004	33500020	antisense	C130021I20Rik	.	ENSMUSG00000052951	ProperStrand	2	chr5	123338715	123338763	protein_coding	Kdm2b	exon	ENSMUSG00000029475	ProperStrand	30	1	-inf
chr9	70291544	70298188	protein_coding	Rnf111	exon	ENSMUSG00000032217	ProperStrand	33	chr17	35087897	35087946	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-6.3771
chr18	75529013	75529113	protein_coding	Smad7	exon	ENSMUSG00000025880	ProperStrand	83	chr9	15119373	15119425	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-4.4841
chr1	74024375	74024458	protein_coding	Tns1	intron	ENSMUSG00000055322	ProperStrand	63	chr18	35714150	35714250	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-3.3536
chr11	116535944	116535982	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr8	108369331	108370256	protein_coding	Cenpt	exon	ENSMUSG00000036672	ProperStrand	13	2	-14.3598
chr13	96100639	96100691	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	chr11	116938557	116938647	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	13	-inf
chr11	75546509	75546565	protein_coding	Ywhae	utr5	ENSMUSG00000020849	ProperStrand	176	chr11	6520321	6520367	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	1	-5.5929
chr4	151734979	151734997	protein_coding	Chd5	exon	ENSMUSG00000005045	ProperStrand	51	chr7	4691730	4691749	protein_coding	Suv420h2	utr5	ENSMUSG00000059851	NonProperStrand	70	1	-13.3349
chr10	74815176	74815199	protein_coding-noncoding	1110038D17Rik	utr3	ENSMUSG00000033416	NonProperStrand	5	chr9	15119713	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-7.5411
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	2	-5.9907
chr1	170093662	170093680	protein_coding	Pbx1	intron	ENSMUSG00000052534	ProperStrand	13	chr4	131908357	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.0703
chr8	125932007	125932023	protein_coding	Mc1r	exon	ENSMUSG00000074037	ProperStrand	1	chr5	121655016	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-inf
chr3	133150756	133150793	protein_coding	Tet2	exon	ENSMUSG00000040943	ProperStrand	192	chr8	32260336	32260416	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	2	-4.4012
chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	chr8	98245427	98245473	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	1	-5.9833
chr4	18020485	18020501	protein_coding	Mmp16	exon	ENSMUSG00000028226	ProperStrand	55	chr11	106362557	106362638	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-7.5781
chr16	23111777	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	chr3	153574605	153574654	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	4	-0.8920
chr5	109124122	109132306	protein_coding	Fgfrl1	exon	ENSMUSG00000008090	ProperStrand	111	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.9141
chr1	88423448	88423479	protein_coding	Ptma	utr5	ENSMUSG00000026238	ProperStrand	385	chr17	35088957	35088997	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-2.4097
chr8	108403868	108403908	protein_coding	Nutf2	utr3	ENSMUSG00000008450	ProperStrand	39	chr4	131865858	131865948	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-9.0381
chr3	153575145	153575167	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	chr9	15119319	15119426	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-1.0055
chr10	110359066	110359179	protein_coding	Csrp2	intron	ENSMUSG00000020186	ProperStrand	24	chr1	162967537	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-5.2247
chr16	37653931	37653990	protein_coding	Ndufb4	intron	ENSMUSG00000022820	ProperStrand	5	chr16	23111447	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-19.1622
chr2	9985901	9985917	protein_coding	Atp5c1	exon	ENSMUSG00000025781	ProperStrand	138	chr7	34987329	34987385	protein_coding	Gpi1	utr3	ENSMUSG00000036427	ProperStrand	288	1	-8.5017
chr5	147646583	147647457	protein_coding	Rpl21	exon	ENSMUSG00000041453	ProperStrand	112	chr4	131908236	131908414	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	17	-20.8472
chr17	45802450	45802466	antisense	Gm16172	.	ENSMUSG00000086472	ProperStrand	17	chr11	6428060	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.6076
chr16	57391627	57391721	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr16	23111694	23111809	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	NonProperStrand	47	3	-inf
chr15	76446555	76447068	protein_coding	Slc39a4	exon	ENSMUSG00000063354	ProperStrand	35	chr2	166890516	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-8.6385
chr2	32543181	32543348	protein_coding	Fpgs	exon	ENSMUSG00000009566	ProperStrand	8	chr10	20041321	20041363	protein_coding	Bclaf1	intron	ENSMUSG00000037608	ProperStrand	83	1	-16.7121
chr2	143780927	143782505	protein_coding	Rrbp1	exon	ENSMUSG00000027422	ProperStrand	76	chr11	69481388	69481433	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	4	-9.7728
chr7	139591703	139591719	protein_coding	Fgfr2	intron	ENSMUSG00000030849	NonProperStrand	95	chr4	131866152	131866179	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-4.9230
chr4	41707315	41707332	protein_coding	Il11ra1	utr5	ENSMUSG00000073889	ProperStrand	128	chr11	6428093	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.8999
chr2	90235310	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	112571058	112571075	lincRNA	BC006965	intron	ENSMUSG00000041674	ProperStrand	16	1	-7.0757
chr14	56243012	56243042	protein_coding	Rec8	exon	ENSMUSG00000002324	ProperStrand	2	chr10	39978273	39978308	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-12.8756
chr6	146261384	146261401	protein_coding	Itpr2	exon	ENSMUSG00000030287	NonProperStrand	42	chr16	23110828	23110957	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-2.3773
chr4	43505656	43505721	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr3	89207322	89207388	protein_coding	Flad1	exon	ENSMUSG00000042642	ProperStrand	7	1	-7.3054
chr1	153912813	153912903	protein_coding	1700025G04Rik	intron	ENSMUSG00000032666	ProperStrand	25	chr7	54442907	54442997	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-11.4996
chr12	70411344	70411383	protein_coding	Klhdc2	utr3	ENSMUSG00000020978	ProperStrand	13	chr10	23505152	23505253	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-16.8282
chr13	64295265	64295345	protein_coding	Cdc14b	utr3	ENSMUSG00000033102	ProperStrand	9	chr15	72824955	72825044	protein_coding	Trappc9	intron	ENSMUSG00000047921	ProperStrand	44	1	-17.8306
chr15	79908786	79908825	protein_coding	Rpl3	exon	ENSMUSG00000060036	ProperStrand	8342	chr1	65040477	65040550	pseudogene	Rpl10a-ps1	.	ENSMUSG00000084416	ProperStrand	1	1	-inf
chr11	55208318	55208398	protein_coding	Sparc	utr3	ENSMUSG00000018593	ProperStrand	48	chr18	74938045	74938135	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	ProperStrand	1022	1	-8.0947
chr11	69481292	69483294	protein_coding-noncoding	Eif4a1	utr3	ENSMUSG00000059796	ProperStrand	68	chr11	69481339	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-5.1495
chr19	5492564	5492631	protein_coding	Cfl1	exon	ENSMUSG00000056201	ProperStrand	88	chr4	131865884	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.2107
chr8	89408874	89408890	protein_coding	N4bp1	utr5	ENSMUSG00000031652	ProperStrand	98	chr1	162965531	162965555	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.4133
chr8	74008400	74008417	protein_coding	Ano8	exon	ENSMUSG00000034863	NonProperStrand	171	chr11	69483195	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	5	-5.8166
chr12	70462378	70462473	misc_RNA	AC157822.1	.	ENSMUSG00000092773	ProperStrand	18	chr4	131908686	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.1942
chr15	57926729	57926811	protein_coding	Atad2	utr3	ENSMUSG00000022360	ProperStrand	47	chr9	15118305	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.9207
chr12	101578351	101578398	protein_coding	Ttc7b	intron	ENSMUSG00000033530	ProperStrand	49	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-3.1806
chr19	32291735	32291825	protein_coding	Sgms1	intron	ENSMUSG00000040451	ProperStrand	10	chr16	23111705	23111785	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.2069
chr1	165882336	165882432	protein_coding	Scyl3	exon	ENSMUSG00000026584	ProperStrand	24	chr16	23111374	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	13	-20.9899
chr2	91613185	91613203	protein_coding	Ambra1	exon	ENSMUSG00000040506	ProperStrand	65	chr16	23111690	23111753	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.7776
chr14	51427118	51427378	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr4	131865858	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	20	-2.1141
chr18	75161533	75161557	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	chr14	31827478	31827547	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	6	-9.6772
chr9	28681889	28681910	protein_coding	Opcml	intron	ENSMUSG00000062257	ProperStrand	10	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-10.6073
chr1	106931719	106931738	LTR	MTEa	MaLR	chr1MTEa106931615	ProperStrand	1	chr2	26493366	26493466	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-inf
chr17	12408183	12408200	protein_coding	Agpat4	exon	ENSMUSG00000023827	ProperStrand	15	chr5	77711584	77711682	protein_coding	Rest	exon	ENSMUSG00000029249	ProperStrand	136	1	-14.4926
chr5	66019338	66021251	protein_coding	Pds5a	exon	ENSMUSG00000029202	ProperStrand	62	chr11	97694885	97694923	protein_coding	Lasp1	exon	ENSMUSG00000038366	ProperStrand	65	1	-13.0876
chr19	3371665	3375096	protein_coding	Cpt1a	exon	ENSMUSG00000024900	ProperStrand	48	chrX	131528273	131528292	protein_coding	Zmat1	intron	ENSMUSG00000052676	ProperStrand	2	1	-inf
chr1	71075033	71075070	protein_coding	Bard1	utr3	ENSMUSG00000026196	ProperStrand	44	chr3	123210854	123210888	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-4.5573
chr13	15213195	15213275	LINE	Lx	L1	chr13Lx15212517	NonProperStrand	1	chr16	92167393	92167483	LINE	Lx8	L1	chr16Lx892166417	NonProperStrand	1	1	-inf
chr3	123039527	123045973	protein_coding	Sec24d	exon	ENSMUSG00000039234	ProperStrand	22	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-10.9562
mmu-miR-1949	0	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr1	88252837	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	2	-3.4016
chr11	48619533	48619584	protein_coding	Gnb2l1	utr3	ENSMUSG00000020372	ProperStrand	347	chrX	39448037	39448080	protein_coding	Xiap	exon	ENSMUSG00000025860	ProperStrand	14	2	-inf
chr16	35932620	35932636	protein_coding	Dtx3l	exon	ENSMUSG00000049502	ProperStrand	152	chr11	62416951	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-4.2458
chr3	35951480	35951496	protein_coding	Ccdc144b	intron	ENSMUSG00000047696	NonProperStrand	1	chr18	35714144	35714223	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-inf
chr11	62186925	62190218	protein_coding	Ncor1	exon	ENSMUSG00000018501	ProperStrand	132	chr9	106347977	106348112	protein_coding	Abhd14a	utr5	ENSMUSG00000042210	ProperStrand	6	4	-18.8519
chr1	145624485	145624512	protein_coding	Uchl5	utr5	ENSMUSG00000018189	ProperStrand	15	chr16	23111777	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-7.4115
chr6	123089131	123089269	protein_coding	Clec4a2	exon	ENSMUSG00000030148	ProperStrand	44	chr8	73419669	73419776	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.6992
chr15	98693953	98694075	protein_coding	Mll2	exon	ENSMUSG00000048154	ProperStrand	170	chr1	162965570	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.5378
chr12	113883084	113883168	protein_coding	Siva1	utr5	ENSMUSG00000064326	ProperStrand	7	chr16	23110902	23110920	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-6.1472
chr14	31827478	31827545	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	chr14	52829460	52829560	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-2.1635
chr14	69902996	69903071	protein_coding	Slc25a37	utr5	ENSMUSG00000034248	ProperStrand	37	chr10	5987861	5987951	protein_coding	Akap12	utr3	ENSMUSG00000038587	ProperStrand	1008	1	-8.6452
chr15	36912548	36912627	LINE	L3	CR1	chr15L336912489	NonProperStrand	2	chr5	108336369	108336409	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-inf
chr3	41386766	41386782	protein_coding	Phf17	intron	ENSMUSG00000025764	NonProperStrand	6	chr17	27559700	27559717	protein_coding	Grm4	utr3	ENSMUSG00000063239	ProperStrand	147	1	-16.2507
chr1	133141328	133141345	protein_coding	Rassf5	exon	ENSMUSG00000026430	ProperStrand	73	chr5	130300460	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-3.9040
chr10	34123539	34127365	protein_coding	Nt5dc1	exon	ENSMUSG00000039480	ProperStrand	16	chr11	69483136	69483213	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	4	-15.7420
chr18	63908609	63908625	protein_coding	Wdr7	intron	ENSMUSG00000040560	NonProperStrand	180	chr1	162965531	162965569	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.4545
chr1	183848609	183848699	protein_coding	Enah	exon	ENSMUSG00000022995	ProperStrand	196	chr10	110927523	110927603	protein_coding	Nap1l1	intron	ENSMUSG00000058799	ProperStrand	185	1	-8.6838
chr13	68759738	68764669	protein_coding	Adcy2	exon	ENSMUSG00000021536	ProperStrand	237	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.0787
chr10	12341172	12353751	protein_coding	Utrn	exon	ENSMUSG00000019820	ProperStrand	69	chr6	115757991	115758119	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	4	-16.0484
chr2	90235285	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chrX	34667269	34667285	protein_coding	Nkap	exon	ENSMUSG00000016409	NonProperStrand	133	4	-10.2940
chr6	39349239	39349333	protein_coding	Mkrn1	exon	ENSMUSG00000029922	ProperStrand	177	chr15	5068446	5068480	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-3.9825
chr5	109340239	109340256	antisense	RP24-465G18.2	.	ENSMUSG00000093479	NonProperStrand	2	chr16	23110828	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chrX	65970370	65970388	protein_coding	Fmr1	utr3	ENSMUSG00000000838	ProperStrand	18	chr19	8799594	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-9.1920
chr17	32197416	32197432	protein_coding	Rrp1b	exon	ENSMUSG00000058392	NonProperStrand	39	chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	1	-12.3027
chr6	52154058	52154076	antisense	2700086A05Rik	.	ENSMUSG00000085696	ProperStrand	13	chr11	68715833	68715857	protein_coding	Rpl26	exon	ENSMUSG00000060938	ProperStrand	130	1	-14.8811
chr17	71495480	71495570	lincRNA	Gm16724	intron	ENSMUSG00000085916	ProperStrand	13	chr17	55791572	55791652	protein_coding	Pot1b	utr3	ENSMUSG00000024174	NonProperStrand	3	1	-inf
chr17	83878316	83878403	protein_coding	Eml4	utr3	ENSMUSG00000032624	ProperStrand	50	chr9	15119379	15119425	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-5.4641
chr6	85409191	85415978	protein_coding	Cct7	exon	ENSMUSG00000030007	ProperStrand	173	chr11	97642952	97643093	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-2.9538
chr13	3564430	3564530	protein_coding	Gdi2	utr3	ENSMUSG00000021218	ProperStrand	49	chr11	77996560	77996619	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-6.4924
chr13	100200002	100200065	protein_coding	Mtap1b	exon	ENSMUSG00000052727	ProperStrand	76	chr7	116663713	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.1157
chr9	78215663	78215815	protein_coding	Dppa5a	exon	ENSMUSG00000060461	ProperStrand	79	chr10	23505169	23505258	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-1.7818
chr18	66154556	66162093	protein_coding	Lman1	exon	ENSMUSG00000041891	ProperStrand	36	chr16	23111373	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-3.6850
chr6	65846842	65846875	protein_coding	Prdm5	intron	ENSMUSG00000029913	ProperStrand	50	chr1	74511500	74511619	protein_coding	Usp37	intron	ENSMUSG00000033364	ProperStrand	47	4	-inf
chr1	63098664	63098766	protein_coding	Ino80d	utr3	ENSMUSG00000040865	ProperStrand	70	chr2	32818891	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	5	-19.5192
chr5	68022003	68022728	protein_coding	Atp8a1	exon	ENSMUSG00000037685	ProperStrand	20	chr7	116663636	116663769	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.5385
chr11	6518513	6519005	protein_coding	Tbrg4	exon	ENSMUSG00000000384	ProperStrand	24	chr4	131865470	131865516	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	6	-inf
chr3	123580952	123581042	DNA	MER82	MER2_type	chr3MER82123580872	NonProperStrand	1	chr10	75660075	75660165	LINE	Lx2	L1	chr10Lx275658861	NonProperStrand	1	1	-inf
chr3	85779909	85779999	DNA	RCHARR1	MER1_type	chr3RCHARR185779651	NonProperStrand	1	chr16	23111374	23111454	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-inf
chr2	32818572	32819029	protein_coding	Rpl12	exon	ENSMUSG00000038900	ProperStrand	167	chr14	77424372	77424388	protein_coding	9030625A04Rik	utr3	ENSMUSG00000044350	NonProperStrand	152	1	-9.3954
chr11	51813891	51813909	protein_coding	Ube2b	utr5	ENSMUSG00000020390	NonProperStrand	2	chr11	68886928	68887018	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-11.5005
chr9	30235085	30235101	protein_coding	Snx19	exon	ENSMUSG00000031993	ProperStrand	353	chr11	96679441	96679523	protein_coding	Nfe2l1	utr3	ENSMUSG00000038615	ProperStrand	118	1	-8.4090
chr18	42805538	42805554	protein_coding	Ppp2r2b	exon	ENSMUSG00000024500	NonProperStrand	95	chr3	108357368	108357390	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-3.6740
chr3	113827103	113827119	protein_coding	Col11a1	utr3	ENSMUSG00000027966	NonProperStrand	139	chr3	88769964	88769993	protein_coding	Ash1l	exon	ENSMUSG00000028053	ProperStrand	30	1	-13.0280
chr17	68083087	68083103	protein_coding	Lama1	intron	ENSMUSG00000032796	NonProperStrand	26	chr16	23111372	23111508	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-4.5661
chr7	4744568	4744596	protein_coding	Rpl28	utr5	ENSMUSG00000030432	ProperStrand	220	chr2	180419672	180419772	protein_coding	Dido1	exon	ENSMUSG00000038914	ProperStrand	81	1	-10.1048
chr9	123371290	123371308	protein_coding	Lars2	utr3	ENSMUSG00000035202	ProperStrand	11	chr5	111121066	111121183	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	5	-20.7196
chr2	146855655	146855675	protein_coding	Xrn2	exon	ENSMUSG00000027433	ProperStrand	48	chr7	118219574	118219625	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-4.5962
chr11	74718785	74718852	protein_coding	Tsr1	intron	ENSMUSG00000038335	ProperStrand	48	chr6	115758011	115758101	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	2	-9.6299
chr5	5677452	5677473	protein_coding	Steap2	exon	ENSMUSG00000015653	ProperStrand	17	chr1	33828651	33828669	protein_coding	Zfp451	intron	ENSMUSG00000042197	NonProperStrand	393	1	-12.1092
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr12	106855290	106855306	protein_coding	Atg2b	exon	ENSMUSG00000041341	ProperStrand	67	1	-4.2526
chr1	182664647	182666837	protein_coding	Acbd3	exon	ENSMUSG00000026499	ProperStrand	67	chr4	131908809	131908871	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.0774
chr9	46089574	46089600	protein_coding	Zfp259	utr3	ENSMUSG00000032078	ProperStrand	9	chr11	69481383	69481433	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-6.9176
chr17	29151712	29151743	antisense	Gm16196	.	ENSMUSG00000086154	ProperStrand	1	chr7	116663634	116663724	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-inf
chr10	109640049	109640066	SINE	RSINE1	B4	chr10RSINE1109639979	ProperStrand	51	chr13	21872202	21872251	protein_coding	Hist1h1b	exon	ENSMUSG00000058773	ProperStrand	65	1	-13.4827
chr1	20602892	20602910	protein_coding	Pkhd1	exon	ENSMUSG00000043760	ProperStrand	15	chr8	73419657	73419743	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-9.5266
chr2	34631525	34631620	protein_coding	Hspa5	exon	ENSMUSG00000026864	ProperStrand	181	chr4	131908689	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-1.4745
chr7	13615530	13615823	protein_coding	Trim28	exon	ENSMUSG00000005566	ProperStrand	296	chr16	24984504	24984520	protein_coding	Lpp	utr3	ENSMUSG00000033306	NonProperStrand	189	1	-7.8213
chr5	130750500	130750590	protein_coding	Tyw1	exon	ENSMUSG00000056310	ProperStrand	32	chr6	115758046	115758126	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-6.7146
chr17	28466416	28466467	protein_coding	Rpl10a	exon	ENSMUSG00000037805	ProperStrand	121	chr2	26494763	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	3	-5.3080
chr4	112929378	112929396	protein_coding	Skint6	intron	ENSMUSG00000087194	NonProperStrand	35	chr16	23110840	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.8578
chr14	27734232	27734343	protein_coding	Appl1	utr3	ENSMUSG00000040760	ProperStrand	42	chr19	8963027	8963062	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.8907
chr3	156224612	156224628	lincRNA	4930570G19Rik	exon	ENSMUSG00000085084	ProperStrand	326	chr1	191674817	191674868	protein_coding	Ptpn14	exon	ENSMUSG00000026604	ProperStrand	74	1	-9.5008
chr3	104459815	104459905	protein_coding	Slc16a1	utr3	ENSMUSG00000032902	ProperStrand	48	chr7	29136587	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.7493
chr1	183761729	183761762	protein_coding	Lbr	exon	ENSMUSG00000004880	ProperStrand	97	chr4	131908236	131908293	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-1.6339
chr1	89377777	89377793	protein_coding	Ngef	exon	ENSMUSG00000026259	NonProperStrand	41	chr4	41673405	41673421	protein_coding	Il11ra1	intron	ENSMUSG00000073889	ProperStrand	128	1	-12.5607
chr17	58145657	58145675	protein_coding	Cntnap5c	intron	ENSMUSG00000038048	NonProperStrand	9	chr11	62416578	62416635	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-8.9986
chr9	49373680	49374784	protein_coding	Ncam1	exon	ENSMUSG00000039542	NonProperStrand	8	chr16	23111450	23111492	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.8232
chr11	101332158	101332380	protein_coding	Rnd2	exon	ENSMUSG00000001313	ProperStrand	49	chr18	35714148	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	6	-19.7687
chr16	82377066	82377084	LINE	L1_Mus3	L1	chr16L1_Mus382376883	ProperStrand	3	chr15	96522121	96522757	protein_coding	Slc38a2	exon	ENSMUSG00000022462	ProperStrand	133	2	-inf
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr12	112779147	112779230	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	3	-2.4335
chr6	135612172	135612267	LTR	ORR1E	MaLR	chr6ORR1E135612053	ProperStrand	5	chr15	85705566	85705615	protein_coding	Gtse1	exon	ENSMUSG00000022385	ProperStrand	74	5	-inf
chr8	3516535	3516552	protein_coding	Pnpla6	utr5	ENSMUSG00000004565	ProperStrand	60	chr11	106362629	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-7.4045
chr8	86439385	86439440	protein_coding	Lphn1	utr5	ENSMUSG00000013033	ProperStrand	221	chr16	36071984	36072000	protein_coding	Ccdc58	utr5	ENSMUSG00000075229	NonProperStrand	55	1	-10.8738
chr15	99271717	99271794	protein_coding	Nckap5l	intron	ENSMUSG00000023009	ProperStrand	51	chr16	23111374	23111447	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	7	-12.7419
chr14	70196737	70196837	protein_coding	Rhobtb2	exon	ENSMUSG00000022075	ProperStrand	22	chr17	35087896	35087958	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-7.1904
chr2	29926007	29926087	protein_coding	Set	exon	ENSMUSG00000054766	ProperStrand	167	chr2	130101968	130102058	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	3	-8.5030
chr7	87242834	87243114	protein_coding	Idh2	exon	ENSMUSG00000030541	ProperStrand	21	chr16	23111451	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.9586
chr8	129468782	129468867	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	chr11	6520321	6520423	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	3	-1.2352
chr14	65854357	65854374	protein_coding	Fzd3	exon	ENSMUSG00000007989	ProperStrand	4	chr16	23110987	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.6489
chr11	56852583	56852601	protein_coding	Gria1	intron	ENSMUSG00000020524	ProperStrand	10	chr1	162965980	162966044	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-7.1350
chr11	92004965	92004981	LTR	ORR1E	MaLR	chr11ORR1E92004828	ProperStrand	1	chr1	162965980	162966028	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-inf
chr2	167836657	167836685	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	chr14	55476645	55476661	protein_coding	Homez	exon	ENSMUSG00000057156	NonProperStrand	127	1	-10.6271
chr7	16677708	16678202	protein_coding	Zfp541	exon	ENSMUSG00000078796	ProperStrand	33	chr10	23505152	23505274	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.1417
chr17	13115701	13115781	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	chr12	88778631	88778721	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	2	-2.4833
chr11	88719968	88720058	protein_coding	Akap1	intron	ENSMUSG00000018428	ProperStrand	45	chr4	122968598	122968678	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-6.8514
chr11	3209234	3210996	processed_transcript	Gm11944	.	ENSMUSG00000084941	ProperStrand	10	chr9	40612850	40612897	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	4	-19.5513
chr2	165899932	165900022	protein_coding	Sulf2	utr3	ENSMUSG00000006800	ProperStrand	171	chr4	131865413	131865493	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-2.1424
chr9	72595453	72595504	protein_coding	Nedd4	utr3	ENSMUSG00000032216	ProperStrand	308	chr1	102076760	102076791	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	2	-10.0221
chr9	108403571	108403626	protein_coding	Usp19	exon	ENSMUSG00000006676	ProperStrand	57	chr4	131866156	131866246	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	4	-12.3957
chr3	100864775	100864849	protein_coding	Ptgfrn	exon	ENSMUSG00000027864	ProperStrand	67	chr6	71832595	71832685	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-5.3954
chr6	83878047	83878070	protein_coding	Zfml	intron	ENSMUSG00000030016	ProperStrand	45	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-2.1851
chr4	149616243	149618167	protein_coding	Eno1	exon	ENSMUSG00000063524	ProperStrand	432	chr7	148634712	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	3	-2.7373
chr15	76077328	76078368	protein_coding	Grina	utr5	ENSMUSG00000022564	ProperStrand	18	chr8	89365444	89365515	protein_coding	N4bp1	utr3	ENSMUSG00000031652	ProperStrand	98	8	-20.1030
chr9	114472328	114473212	protein_coding	Trim71	utr5	ENSMUSG00000079259	ProperStrand	162	chr4	131865866	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.1216
chr8	13014869	13014885	protein_coding	Mcf2l	exon	ENSMUSG00000031442	NonProperStrand	35	chr3	123210853	123210897	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-5.1939
chr11	102294589	102294607	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chrX	152009278	152009294	protein_coding	Ptchd1	exon	ENSMUSG00000041552	NonProperStrand	294	1	-5.7451
chr4	149026816	149026832	protein_coding	Pik3cd	exon	ENSMUSG00000039936	ProperStrand	151	chr19	8963129	8963164	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-0.9237
chr16	14317288	14317307	sense_intronic	Gm15869	.	ENSMUSG00000087557	NonProperStrand	1	chr12	55797774	55797831	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	1	-inf
chr11	117018267	117018357	protein_coding	Sec14l1	utr3	ENSMUSG00000020823	ProperStrand	71	chr4	131866155	131866235	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-3.3554
chr9	105860770	105860791	protein_coding	Col6a5	intron	ENSMUSG00000091345	NonProperStrand	6	chr17	24856620	24856727	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-11.1624
chr6	72704035	72704135	protein_coding	Tcf7l1	intron	ENSMUSG00000055799	ProperStrand	61	chr4	131865920	131865986	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.7424
chr4	149478989	149479079	protein_coding	Gpr157	utr3	ENSMUSG00000047875	NonProperStrand	11	chr19	8963096	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.4574
chr13	51743567	51743661	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	chr2	166890840	166890858	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	1	-4.0247
chr6	67234598	67234688	protein_coding	Serbp1	utr3	ENSMUSG00000036371	ProperStrand	261	chr12	17552950	17552994	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	8	-19.7518
chr11	102343059	102343105	protein_coding	Gpatch8	exon	ENSMUSG00000034621	ProperStrand	49	chr9	15118331	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	3	-9.4410
chr3	97817679	97851651	protein_coding	Notch2	exon	ENSMUSG00000027878	ProperStrand	86	chr14	76956323	76956339	protein_coding	Serp2	utr5	ENSMUSG00000052584	NonProperStrand	41	1	-13.3609
chr17	66468410	66468427	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	chr5	136410200	136410281	protein_coding	Ywhag	utr5	ENSMUSG00000051391	ProperStrand	142	1	-8.1323
chr19	4604472	4604554	protein_coding	Pcx	exon	ENSMUSG00000024892	ProperStrand	70	chr17	24857770	24857848	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	13	-21.4542
chr5	39064686	39064732	protein_coding	Zfp518b	exon	ENSMUSG00000046572	ProperStrand	95	chr4	131908236	131908316	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.8219
chr5	138723220	138740651	protein_coding	Stag3	exon	ENSMUSG00000036928	ProperStrand	53	chr9	15119646	15119762	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-4.9553
chr12	70260013	70260098	protein_coding	Rps29	utr5	ENSMUSG00000034892	ProperStrand	124	chr5	74489551	74489594	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-2.4779
chrX	20527629	20527648	protein_coding	Elk1	utr5	ENSMUSG00000009406	NonProperStrand	3	chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	1	-15.8108
chr7	111712708	111712725	protein_coding	Olfr652	utr5	ENSMUSG00000073927	NonProperStrand	3	chr13	90238585	90238702	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	3	-inf
chr2	156218520	156218567	protein_coding	2900097C17Rik	exon	ENSMUSG00000067833	ProperStrand	7	chr2	130101292	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-10.9937
chr15	89138146	89138246	protein_coding	Sbf1	exon	ENSMUSG00000036529	ProperStrand	85	chr18	35716832	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.6197
chr7	86278801	86278849	protein_coding	Mfge8	utr3	ENSMUSG00000030605	ProperStrand	73	chr8	73115775	73115791	protein_coding	Ell	utr3	ENSMUSG00000070002	NonProperStrand	134	1	-11.3061
chr6	143007910	143007930	protein_coding	5730419I09Rik	intron	ENSMUSG00000030279	ProperStrand	81	chr19	8798740	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-4.2276
chr2	112202959	112202975	protein_coding	Slc12a6	utr3	ENSMUSG00000027130	NonProperStrand	72	chr11	106362673	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-7.0417
chr16	20500295	20500375	protein_coding	Eif2b5	exon	ENSMUSG00000003235	ProperStrand	38	chr19	53696370	53697157	protein_coding	Smc3	exon	ENSMUSG00000024974	ProperStrand	61	1	-14.1994
chr17	29632110	29632210	protein_coding	Pim1	utr3	ENSMUSG00000024014	ProperStrand	13	chr1	58116010	58116028	protein_coding	Aox1	exon	ENSMUSG00000063558	ProperStrand	20	1	-18.7925
chr9	35023085	35023175	protein_coding	Srpr	exon	ENSMUSG00000032042	ProperStrand	54	chr4	131908356	131908410	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.5731
chr2	181124509	181124599	protein_coding	Zbtb46	utr3	ENSMUSG00000027583	ProperStrand	7	chr7	116664792	116664887	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-11.0704
chr7	133691427	133695542	protein_coding	Eif3c	exon	ENSMUSG00000030738	ProperStrand	92	chr8	73419657	73419725	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.3834
chr10	70509994	70510015	protein_coding	Bicc1	intron	ENSMUSG00000014329	NonProperStrand	13	chr1	182740313	182741941	protein_coding	H3f3a	exon	ENSMUSG00000060743	ProperStrand	46	1	-17.0458
chr16	57391725	57391758	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr11	68887036	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	NonProperStrand	12	1	-13.5902
chr16	91227718	91227735	protein_coding	Olig2	utr3	ENSMUSG00000039830	NonProperStrand	78	chr14	76247753	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-3.6804
chr10	5989200	5989237	protein_coding	Akap12	utr3	ENSMUSG00000038587	ProperStrand	1008	chr1	88252838	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	3	-4.3839
chr6	124662374	124662454	protein_coding	Phb2	utr5	ENSMUSG00000004264	ProperStrand	43	chr3	68889050	68889124	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-3.8727
chrX	120217138	120217155	protein_coding	3110007F17Rik	utr5	ENSMUSG00000079450	NonProperStrand	18	chr16	23110455	23110523	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-7.8358
chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr7	24713726	24713742	protein_coding	Vmn1r179	exon	ENSMUSG00000046924	NonProperStrand	69	1	-6.1782
chr19	47929768	47929787	protein_coding	Wdr96	intron	ENSMUSG00000044948	ProperStrand	9	chr17	35087894	35087962	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-9.0335
chr2	4974190	4974207	protein_coding	Optn	exon	ENSMUSG00000026672	ProperStrand	451	chr7	5062341	5062360	protein_coding	Rfpl4	exon	ENSMUSG00000035191	NonProperStrand	27	1	-10.8872
chr16	23110454	23110526	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	chr16	18240799	18240899	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	6	-2.2718
chr11	85017757	85017815	protein_coding	Appbp2	exon	ENSMUSG00000018481	ProperStrand	15	chr5	144682913	144684359	protein_coding	Pms2	exon	ENSMUSG00000079109	ProperStrand	21	4	-19.6471
chr15	7141144	7141224	protein_coding	Lifr	utr3	ENSMUSG00000054263	ProperStrand	64	chr19	8963088	8963179	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.1678
chr11	69548007	69548097	protein_coding	Polr2a	exon	ENSMUSG00000005198	ProperStrand	200	chr11	69481352	69481432	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-1.2478
chr18	61715368	61715385	protein_coding	Csnk1a1	utr5	ENSMUSG00000024576	NonProperStrand	35	chr19	44379049	44379192	protein_coding	Scd2	utr3	ENSMUSG00000025203	ProperStrand	219	7	-inf
chr3	49336281	49336301	LINE	L1_Mus2	L1	chr3L1_Mus249336241	ProperStrand	4	chr6	7625327	7625373	protein_coding	Asns	exon	ENSMUSG00000029752	ProperStrand	59	1	-18.4600
chr19	41669422	41669512	protein_coding	AI606181	utr3	ENSMUSG00000074873	ProperStrand	3	chr10	23505178	23505258	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-6.9610
chr17	31210000	31246438	protein_coding	Abcg1	intron	ENSMUSG00000024030	ProperStrand	36	chr4	131908296	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-3.9799
chr7	107788006	107788023	protein_coding	Rab6a	utr3	ENSMUSG00000030704	ProperStrand	23	chr2	130101986	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-7.2605
chr17	30772308	30772324	protein_coding	Dnahc8	utr5	ENSMUSG00000033826	ProperStrand	246	chr1	181320393	181320423	protein_coding	Smyd3	intron	ENSMUSG00000055067	NonProperStrand	190	2	-13.0262
chr10	95011852	95011879	protein_coding	Nudt4	utr3	ENSMUSG00000020029	ProperStrand	32	chr17	30772308	30772324	protein_coding	Dnahc8	utr5	ENSMUSG00000033826	ProperStrand	246	1	-11.7539
chr4	132100634	132102619	protein_coding	Dnajc8	exon	ENSMUSG00000054405	ProperStrand	22	chr7	118219574	118219619	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-6.1281
chr4	132716913	132716960	protein_coding	Wasf2	intron	ENSMUSG00000028868	ProperStrand	56	chr2	26494708	26494800	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	3	-8.1624
chrX	71517869	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	chr7	134671400	134671480	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-1.5863
chr11	93811280	93811318	protein_coding	Gm20390	exon	ENSMUSG00000091228	ProperStrand	33	chr18	35716831	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-11.0559
chr6	47738069	47738110	misc_RNA	Y_RNA	.	ENSMUSG00000065701	ProperStrand	129	chr17	5341859	5341877	protein_coding	Arid1b	exon	ENSMUSG00000069729	NonProperStrand	22	1	-13.8109
chr9	15130904	15131004	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	chr9	64024976	64024998	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	1	-5.0980
chr5	54389948	54389964	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	chr6	52785982	52785998	protein_coding	Jazf1	intron	ENSMUSG00000063568	NonProperStrand	6	1	-15.5164
chr11	102558841	102558886	protein_coding	Ccdc43	exon	ENSMUSG00000020925	ProperStrand	26	chr7	29136526	29136586	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-6.5617
chr7	132842932	132843032	protein_coding	Gtf3c1	exon	ENSMUSG00000032777	ProperStrand	161	chr17	35089181	35089237	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-3.6052
chr5	115939497	115939612	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr1	162967505	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	14	-10.3881
chr2	156130536	156133078	protein_coding	Phf20	exon	ENSMUSG00000038116	ProperStrand	60	chr5	103431794	103431812	protein_coding	Mapk10	intron	ENSMUSG00000046709	ProperStrand	18	1	-15.7378
chrX	133263790	133263880	LINE	L1Md_T	L1	chrXL1Md_T133263613	ProperStrand	1	chr5	30387190	30387280	protein_coding	Tyms	utr3	ENSMUSG00000025747	NonProperStrand	6	1	-inf
chr12	113015126	113015142	protein_coding	Klc1	exon	ENSMUSG00000021288	ProperStrand	35	chr4	131908810	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.0337
chr18	39570564	39570580	protein_coding	Nr3c1	utr3	ENSMUSG00000024431	ProperStrand	13	chr9	15119631	15119746	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.5260
chr17	85482653	85489599	protein_coding	Prepl	utr5	ENSMUSG00000024127	ProperStrand	106	chr2	160191558	160191574	protein_coding	Mafb	exon	ENSMUSG00000074622	ProperStrand	31	1	-13.5021
chr1	182868242	182868322	protein_coding	Lefty1	utr3	ENSMUSG00000038793	ProperStrand	28	chr11	68886952	68887042	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-5.6206
chr1	77266777	77266867	LTR	MTD	MaLR	chr1MTD77266696	NonProperStrand	1	chr1	78364249	78364339	protein_coding	Sgpp2	intron	ENSMUSG00000032908	NonProperStrand	2	1	-inf
chr9	111592583	111592601	protein_coding	Stac	exon	ENSMUSG00000032502	ProperStrand	22	chr9	120038466	120038528	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.9307
chr11	102907833	102913605	protein_coding	Nmt1	exon	ENSMUSG00000020936	ProperStrand	43	chr9	108651490	108651519	protein_coding	Prkar2a	utr3	ENSMUSG00000032601	ProperStrand	43	2	-inf
chr11	98878369	98878466	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	5	-2.9508
chr13	97949144	97949162	protein_coding	Gfm2	utr3	ENSMUSG00000021666	ProperStrand	26	chr16	19883898	19883915	protein_coding	A930003A15Rik	exon	ENSMUSG00000075330	ProperStrand	93	1	-14.1251
chr18	10052131	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	1	-3.5996
chr6	93127321	93127338	lincRNA	9530026P05Rik	intron	ENSMUSG00000087573	ProperStrand	51	chr10	75400191	75400379	protein_coding	Chchd10	utr3	ENSMUSG00000049422	ProperStrand	140	1	-11.9403
chr5	123622050	123622066	protein_coding	Hpd	exon	ENSMUSG00000029445	ProperStrand	254	chr19	8963027	8963183	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-1.6113
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr10	39978350	39978484	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	6	-11.7894
chr2	127104603	127104680	protein_coding	Stard7	intron	ENSMUSG00000027367	ProperStrand	12	chr16	23110829	23110875	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.4686
chr11	15212155	15212171	LINE	Lx	L1	chr11Lx15211662	ProperStrand	54	chr11	62416575	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-5.3715
chr13	9833560	9833659	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr7	51505242	51505308	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	1	-0.7122
chr7	38354919	38354935	protein_coding	Zfp536	exon	ENSMUSG00000043456	NonProperStrand	236	chr4	116827829	116827858	snoRNA	ENSMUSG00000064751_SNORD46	.	ENSMUSG00000064751	ProperStrand	132	1	-8.9870
chr9	108849816	108849916	protein_coding	Uqcrc1	intron	ENSMUSG00000025651	ProperStrand	43	chr11	48616641	48616706	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	1	-10.0169
chr11	120358070	120358086	protein_coding-noncoding	Slc25a10	utr5	ENSMUSG00000025792	NonProperStrand	2	chr8	98259681	98260155	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	1	-17.4896
chr3	116608610	116608684	LINE	Lx8	L1	chr3Lx8116608588	NonProperStrand	2	chr16	23110971	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr19	6015649	6015666	protein_coding	Capn1	intron	ENSMUSG00000024942	ProperStrand	22	chr9	120038467	120038552	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.9307
chrX	159199624	159206824	protein_coding	Rbbp7	exon	ENSMUSG00000031353	ProperStrand	48	chr1	91358413	91358430	protein_coding	Agap1	intron	ENSMUSG00000055013	ProperStrand	229	2	-17.3131
chr1	20793658	20794910	protein_coding	Mcm3	exon	ENSMUSG00000041859	ProperStrand	142	chr2	26493394	26493474	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-2.2186
chr9	110451430	110451520	protein_coding	Setd2	exon	ENSMUSG00000044791	ProperStrand	51	chr10	23505175	23505255	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.4625
chr1	153418621	153418706	protein_coding	Fam129a	utr5	ENSMUSG00000026483	ProperStrand	21	chr15	5068428	5068478	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	2	-13.0739
chr4	55431652	55431671	lincRNA	Gm12505	exon	ENSMUSG00000087070	ProperStrand	447	chr2	93872908	93872983	protein_coding	Hsd17b12	utr3	ENSMUSG00000027195	ProperStrand	28	1	-10.8308
chr11	115935746	115937022	protein_coding	Unc13d	exon	ENSMUSG00000057948	ProperStrand	89	chr15	102153957	102154191	protein_coding	Espl1	exon	ENSMUSG00000058290	ProperStrand	172	1	-10.4079
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr1	127491938	127491955	protein_coding	Slc35f5	utr3	ENSMUSG00000026342	ProperStrand	70	1	-8.4818
chr7	52647635	52650035	protein_coding	Snrnp70	exon	ENSMUSG00000063511	ProperStrand	61	chr16	23111416	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.2363
chr1	135273548	135275064	protein_coding	Etnk2	exon	ENSMUSG00000070644	ProperStrand	15	chr12	112779239	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	11	-21.0002
chr13	55561652	55561752	protein_coding	Grk6	utr3	ENSMUSG00000074886	NonProperStrand	5	chr8	125542810	125542839	protein_coding	Gm20388	intron	ENSMUSG00000092329	ProperStrand	295	2	-18.9422
chr5	11070860	11070950	LINE	L1Md_A	L1	chr5L1Md_A11069934	ProperStrand	1	chr9	19462368	19462448	LINE	L1Md_A	L1	chr9L1Md_A19461964	ProperStrand	81	1	-inf
chr11	79749096	79749139	protein_coding	Utp6	utr3	ENSMUSG00000035575	ProperStrand	28	chr16	23110558	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-6.5063
chr8	122939648	122939668	protein_coding	Gm20388	intron	ENSMUSG00000092329	NonProperStrand	203	chr11	69483139	69483239	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	4	-3.6393
chr7	140955173	140955198	protein_coding	Dhx32	intron	ENSMUSG00000030986	ProperStrand	100	chr16	23110455	23110557	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.6379
chr5	118477951	118477967	protein_coding	Tesc	exon	ENSMUSG00000029359	ProperStrand	114	chr11	6428103	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.0854
chrX	96245892	96245908	protein_coding	Stard8	intron	ENSMUSG00000031216	ProperStrand	142	chr4	131865393	131865441	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-2.4519
chr2	90235293	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	33273890	33273906	protein_coding	Morc2b	exon	ENSMUSG00000048602	NonProperStrand	14	1	-7.3487
chr17	46401857	46419306	protein_coding	Tjap1	utr5	ENSMUSG00000012296	ProperStrand	11	chr4	131908254	131908344	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.3989
chr1	89303669	89304007	protein_coding	Gigyf2	exon	ENSMUSG00000048000	ProperStrand	128	chr16	23110907	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-1.2956
chr2	153011671	153034832	protein_coding	Tm9sf4	utr3	ENSMUSG00000068040	ProperStrand	27	chr7	116663634	116663724	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-6.6976
chr11	30655671	30655723	lincRNA	Gm12100	exon	ENSMUSG00000087474	ProperStrand	1	chr12	60141414	60141508	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-inf
chr14	122874683	122874700	protein_coding	Zic2	utr5	ENSMUSG00000061524	NonProperStrand	2	chr4	131865856	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-8.7800
chr16	17841868	17841968	protein_coding	Dgcr2	utr3	ENSMUSG00000003166	ProperStrand	45	chr1	91358413	91358430	protein_coding	Agap1	intron	ENSMUSG00000055013	ProperStrand	229	5	-inf
chr16	90386835	90386853	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	chr9	64143803	64143876	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-6.6795
chr6	28430443	28430484	protein_coding	Snd1	utr5	ENSMUSG00000001424	ProperStrand	210	chr13	54723202	54723218	protein_coding	Faf2	exon	ENSMUSG00000025873	ProperStrand	90	1	-9.9864
chr5	31262460	31262500	protein_coding	Preb	utr5	ENSMUSG00000045302	ProperStrand	4	chr11	77995191	77995254	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-11.8288
chr1	182664647	182666837	protein_coding	Acbd3	exon	ENSMUSG00000026499	ProperStrand	67	chr1	153759643	153759664	protein_coding	1700025G04Rik	intron	ENSMUSG00000032666	NonProperStrand	35	1	-14.1825
chr10	115929450	115930806	protein_coding	Cnot2	exon	ENSMUSG00000020166	ProperStrand	12	chr3	123210899	123210952	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.0354
chr2	3371507	3371608	protein_coding	Dclre1c	intron	ENSMUSG00000026648	ProperStrand	8	chr8	113366286	113366327	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	1	-13.3149
chr1	59176901	59176917	protein_coding	Als2cr4	utr5	ENSMUSG00000038079	ProperStrand	15	chr3	88497880	88497980	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	7	-22.6803
chr8	13159389	13159405	protein_coding	Lamp1	exon	ENSMUSG00000031447	ProperStrand	92	chr12	52849618	52849634	protein_coding	Hectd1	exon	ENSMUSG00000035247	NonProperStrand	43	1	-13.1282
chr5	116010927	116012532	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	chr16	23111390	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	11	-5.1292
chr10	77734665	77734755	protein_coding	Agpat3	utr3	ENSMUSG00000001211	ProperStrand	22	chr5	121655017	121655097	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.6854
chr12	112861457	112862728	protein_coding	Mark3	exon	ENSMUSG00000007411	ProperStrand	37	chr5	108336384	108336456	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-5.8255
chr8	124907503	124907593	protein_coding	Zc3h18	exon	ENSMUSG00000017478	ProperStrand	55	chr11	6428091	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.3504
chr3	88497889	88497979	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	chr4	86232406	86232486	snoRNA	ENSMUSG00000088958_Scarna8	.	ENSMUSG00000088958	ProperStrand	366	1	-3.9457
chr2	90235315	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	23332023	23332040	protein_coding	Smc5	exon	ENSMUSG00000024943	ProperStrand	146	1	-2.8249
chr18	78017495	78017603	protein_coding	Atp5a1	exon	ENSMUSG00000025428	ProperStrand	254	chr9	63868722	63868738	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	1	-5.7299
chr8	88072818	88072852	protein_coding	Dnaja2	exon	ENSMUSG00000031701	ProperStrand	39	chr11	68887039	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	2	-8.2163
chr4	137352167	137352208	protein_coding	Alpl	utr5	ENSMUSG00000028766	ProperStrand	80	chr9	70324375	70324391	protein_coding	Rnf111	exon	ENSMUSG00000032217	NonProperStrand	13	1	-15.8614
chr5	28396621	28396642	lincRNA	Gm16719	intron	ENSMUSG00000085535	NonProperStrand	6	chrX	83547356	83547372	protein_coding	Mageb4	intron	ENSMUSG00000035427	NonProperStrand	191	1	-15.7419
chr4	132755016	132755106	protein_coding	Wasf2	utr3	ENSMUSG00000028868	ProperStrand	56	chr11	97642965	97643045	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.5902
chr4	137074932	137075119	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	chr11	69730296	69730328	protein_coding	Eif5a	utr3	ENSMUSG00000078812	ProperStrand	164	2	-9.9132
chr16	86031952	86032032	LTR	ORR1B1-int	MaLR	chr16ORR1B1-int86031352	NonProperStrand	1	chr1	58503478	58503568	protein_coding	Nif3l1	intron	ENSMUSG00000026036	NonProperStrand	2	1	-inf
chr9	96993545	96993571	protein_coding	Slc25a36	exon	ENSMUSG00000032449	ProperStrand	159	chr6	70805452	70805542	snoRNA	ENSMUSG00000065750_SNORA5	.	ENSMUSG00000065750	ProperStrand	165	1	-9.3294
chr12	88449980	88450039	protein_coding	Pomt2	utr3	ENSMUSG00000034126	ProperStrand	15	chr18	75161533	75161555	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-10.0082
chr16	36029716	36031329	protein_coding	Kpna1	exon	ENSMUSG00000022905	ProperStrand	38	chr11	68887039	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-5.0212
chr11	97642952	97643045	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	chr5	147646770	147646850	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	8	-1.2914
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr14	51463983	51463999	protein_coding	Tep1	exon	ENSMUSG00000006281	NonProperStrand	73	1	-5.5193
chr8	72334599	72334615	protein_coding	Gmip	exon	ENSMUSG00000036246	ProperStrand	102	chr8	13877873	13877917	protein_coding	Zfp828	exon	ENSMUSG00000047710	ProperStrand	32	1	-13.5170
chr9	120037932	120038029	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	chr10	90644155	90644191	tRNA	tRNA857-TrpCCA	.	387446	ProperStrand	23	3	-15.1249
chr8	9973222	9973323	protein_coding	Lig4	exon	ENSMUSG00000049717	ProperStrand	14	chr16	23110964	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	9	-20.6472
chr8	74071711	74071759	protein_coding	Fam125a	utr3	ENSMUSG00000031813	ProperStrand	14	chr18	35716703	35716793	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.8493
chr19	5796072	5797819	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr6	122679793	122682860	protein_coding	Slc2a3	exon	ENSMUSG00000003153	ProperStrand	682	7	-18.6624
chr7	150253486	150253530	protein_coding	Cd81	utr3	ENSMUSG00000037706	ProperStrand	88	chr1	162967119	162967178	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	1	-7.9139
chr5	136673671	136673687	protein_coding	Prkrip1	exon	ENSMUSG00000039737	NonProperStrand	30	chr12	54180413	54180434	protein_coding	Akap6	intron	ENSMUSG00000061603	ProperStrand	9	1	-18.9910
chr12	86369933	86370033	protein_coding	Ylpm1	exon	ENSMUSG00000021244	ProperStrand	100	chr4	131865913	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.0431
chr11	75439780	75439827	protein_coding	Pitpna	utr3	ENSMUSG00000017781	ProperStrand	12	chr10	23505192	23505282	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.9771
chr14	25314925	25314989	protein_coding	Rps24	intron	ENSMUSG00000025290	ProperStrand	110	chr2	130102021	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-4.1922
chr5	147646410	147646477	snoRNA	ENSMUSG00000077185_SNORD102	.	ENSMUSG00000077185	ProperStrand	142	chr7	29136573	29136613	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.0671
chr4	55431686	55431705	lincRNA	Gm12505	exon	ENSMUSG00000087070	ProperStrand	447	chr9	120483267	120483373	protein_coding	Rpl14	exon	ENSMUSG00000025794	ProperStrand	123	3	-17.4248
chr7	16955701	16955801	protein_coding	Sae1	exon	ENSMUSG00000052833	ProperStrand	29	chr8	73419668	73419706	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.4906
chr11	6428128	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr18	75160711	75160776	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	2	-0.7769
chr8	98257170	98257881	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	chr1	172975151	172975189	tRNA	tRNA699-GlyGCC	.	57814	ProperStrand	660	1	-5.2433
chr10	90540283	90540317	protein_coding	Apaf1	exon	ENSMUSG00000019979	ProperStrand	27	chr4	131908357	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.7097
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr9	50870096	50870112	protein_coding	Layn	intron	ENSMUSG00000060594	ProperStrand	7	1	-12.1561
chr16	20689405	20689495	protein_coding-noncoding	Eif4g1	utr5	ENSMUSG00000045983	ProperStrand	5	chr16	20689124	20689343	protein_coding	Eif4g1	exon	ENSMUSG00000045983	ProperStrand	199	5	-inf
chr3	82816757	82816774	protein_coding	Fgg	exon	ENSMUSG00000033860	NonProperStrand	321	chr5	121655016	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	7	-9.9137
chr5	65952377	65952395	protein_coding	Ube2k	intron	ENSMUSG00000029203	ProperStrand	289	chr14	73024902	73024978	protein_coding	Fndc3a	intron	ENSMUSG00000033487	ProperStrand	84	1	-9.4871
chr7	28142166	28142218	protein_coding	Spnb4	utr3	ENSMUSG00000011751	ProperStrand	39	chr4	131908693	131908754	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-3.4116
chr12	77389877	77389941	protein_coding	Mthfd1	exon	ENSMUSG00000021048	ProperStrand	71	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-7.3918
chr11	113420849	113423322	protein_coding	Slc39a11	exon	ENSMUSG00000041654	ProperStrand	25	chr12	83538916	83541812	protein_coding	Sipa1l1	exon	ENSMUSG00000042700	ProperStrand	84	1	-14.4194
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr5	108334255	108336487	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	4	-0.8813
chr10	79707811	79707827	SINE	B2_Mm1t	B2	chr10B2_Mm1t79707814	NonProperStrand	14	chr10	107800800	107800857	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	1	-11.0257
chr16	32615286	32615386	protein_coding	Tfrc	exon	ENSMUSG00000022797	ProperStrand	71	chr3	123210854	123210894	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.7983
chr15	78982035	78982051	protein_coding	Polr2f	exon	ENSMUSG00000033020	NonProperStrand	71	chr11	6428108	6428156	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.8910
chr8	66794105	66794185	LTR	ORR1C2	MaLR	chr8ORR1C266794085	NonProperStrand	1	chr8	66793952	66794042	Simple_repeat	(TC)n	Simple_repeat	chr8(TC)n66793906	NonProperStrand	1	1	-inf
chr7	105038145	105038181	protein_coding	Pak1	intron	ENSMUSG00000030774	ProperStrand	13	chr11	6520324	6520423	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	7	-inf
chr4	118795761	118795861	protein_coding	Slc2a1	intron	ENSMUSG00000028645	ProperStrand	361	chr7	52378398	52378420	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	2	-8.1813
chr1	75212055	75212109	protein_coding	Tuba4a	utr3	ENSMUSG00000026202	ProperStrand	20	chr7	38745474	38745490	protein_coding	C80913	utr3	ENSMUSG00000030421	ProperStrand	25	1	-17.2438
chr2	160191558	160191574	protein_coding	Mafb	exon	ENSMUSG00000074622	ProperStrand	31	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-3.2978
chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	chr9	15130707	15130741	snoRNA	ENSMUSG00000077506_Scarna9	.	ENSMUSG00000077506	ProperStrand	148	1	-8.0265
chr8	27091218	27091234	protein_coding	4930444A02Rik	utr3	ENSMUSG00000037251	NonProperStrand	57	chrX	132806130	132806172	protein_coding	Ngfrap1	exon	ENSMUSG00000046432	ProperStrand	28	1	-14.9532
chr5	127737478	127737494	antisense	1700085B03Rik	.	ENSMUSG00000087104	ProperStrand	55	chrX	84483702	84483721	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-8.4232
chr14	20708859	20708901	protein_coding	Gng2	intron	ENSMUSG00000043004	ProperStrand	15	chr18	35716767	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-7.8913
chr2	90235286	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	39086259	39086276	protein_coding	Cyp2c55	exon	ENSMUSG00000025002	ProperStrand	18	1	-6.8363
chr10	120815129	120815219	protein_coding	Gns	exon	ENSMUSG00000034707	ProperStrand	19	chr7	148634717	148634797	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-6.2295
chr19	45055725	45055751	protein_coding	Fam178a	utr3	ENSMUSG00000036097	ProperStrand	29	chr9	15118332	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	3	-11.5565
chr14	51463983	51463999	protein_coding	Tep1	exon	ENSMUSG00000006281	NonProperStrand	73	chr2	32283771	32283839	protein_coding	Slc25a25	intron	ENSMUSG00000026819	ProperStrand	7	1	-17.4003
chr6	24684480	24684497	protein_coding	Hyal6	exon	ENSMUSG00000029679	NonProperStrand	114	chr2	26493372	26493498	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-2.5890
chr11	119353268	119360854	protein_coding	A730011L01Rik	exon	ENSMUSG00000039850	ProperStrand	25	chr11	62416977	62417018	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-7.7906
chr11	34135846	34135863	protein_coding	Dock2	intron	ENSMUSG00000020143	NonProperStrand	31	chr7	54109440	54109467	protein_coding	Ldha	exon	ENSMUSG00000063229	ProperStrand	280	1	-11.5598
chr2	22444182	22445110	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	chr4	131908232	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	21	-2.9573
chr17	24300045	24300061	protein_coding	Amdhd2	exon	ENSMUSG00000036820	ProperStrand	11	chr1	88247814	88247831	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-8.5056
chr6	85087627	85087719	protein_coding	Spr	exon	ENSMUSG00000033735	ProperStrand	2	chr3	68889108	68889188	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-10.5388
chr1	173341933	173341949	protein_coding	Usf1	utr5	ENSMUSG00000026641	NonProperStrand	144	chr4	131865855	131865922	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.3272
chr3	89842932	89847650	protein_coding	Ubap2l	exon	ENSMUSG00000042520	ProperStrand	88	chr11	62416583	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	3	-10.6103
chr14	51427127	51427207	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr4	122970413	122970503	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-1.7462
chr5	66014302	66014328	protein_coding	Pds5a	exon	ENSMUSG00000029202	ProperStrand	62	chr7	116664789	116664889	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-6.5936
chr1	37465035	37465135	protein_coding	Inpp4a	utr3	ENSMUSG00000026113	ProperStrand	21	chr1	182512995	182513910	protein_coding	Parp1	exon	ENSMUSG00000026496	ProperStrand	227	1	-12.7744
chr6	90499238	90499256	protein_coding	Aldh1l1	intron	ENSMUSG00000030088	NonProperStrand	4	chr17	27559700	27559717	protein_coding	Grm4	utr3	ENSMUSG00000063239	ProperStrand	147	1	-17.1755
chr4	137682177	137682257	protein_coding	Eif4g3	exon	ENSMUSG00000028760	ProperStrand	42	chr19	8963053	8963143	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.8907
chr19	56900863	56900879	protein_coding	Tdrd1	utr5	ENSMUSG00000025081	ProperStrand	6	chr6	125136472	125136572	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	1	-11.1773
chr15	81110991	81111009	SINE	ID4	ID	chr15ID481110956	ProperStrand	272	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-5.6027
chr15	10406217	10406244	protein_coding	Brix1	exon	ENSMUSG00000022247	ProperStrand	32	chr15	71624754	71624798	snoRNA	ENSMUSG00000088895_SNORA81	.	ENSMUSG00000088895	ProperStrand	348	5	-18.7579
chr1	153211244	153211271	protein_coding	Ivns1abp	utr3	ENSMUSG00000023150	ProperStrand	51	chr5	135857995	135858011	protein_coding	Pom121	exon	ENSMUSG00000053293	NonProperStrand	94	1	-12.7386
chr2	26493475	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr7	139430077	139430094	protein_coding	Chst15	exon	ENSMUSG00000030930	ProperStrand	20	1	-8.3972
chr4	133403989	133404005	protein_coding	Rps6ka1	exon	ENSMUSG00000003644	ProperStrand	68	chr19	60832121	60832175	protein_coding	Nanos1	utr5	ENSMUSG00000072437	NonProperStrand	3	1	-19.6187
chr4	134107865	134107883	protein_coding	Sepn1	exon	ENSMUSG00000050989	NonProperStrand	4	chr17	24857716	24857741	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-7.6570
chr18	35714143	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	chr5	92485100	92485211	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	11	-10.4680
chr12	60237141	60238721	protein_coding	Ctage5	exon	ENSMUSG00000021000	ProperStrand	35	chr1	58458015	58458055	protein_coding	Bzw1	exon	ENSMUSG00000051223	ProperStrand	14	1	-17.4122
chr6	3794652	3794670	SINE	B4A	B4	chr6B4A3794525	NonProperStrand	26	chr12	112779151	112779280	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-6.4195
chr17	45704818	45704875	protein_coding	Hsp90ab1	utr3	ENSMUSG00000023944	ProperStrand	1627	chr5	104937506	104937522	protein_coding	BC005561	utr5	ENSMUSG00000079065	ProperStrand	7	1	-11.1351
chr13	9833565	9833615	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr4	116827119	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	5	-2.6203
chr4	152856778	152856794	protein_coding	Ajap1	utr5	ENSMUSG00000039546	ProperStrand	51	chr11	62416594	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-8.9835
chr16	32100048	32100104	protein_coding	1500031L02Rik	utr5	ENSMUSG00000035790	ProperStrand	3	chr10	23505190	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-inf
chr3	66100724	66100740	protein_coding	Veph1	utr5	ENSMUSG00000027831	NonProperStrand	92	chr5	108334194	108334241	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-4.0061
chr1	145971868	145971890	LINE	L2	L2	chr1L2145971861	NonProperStrand	49	chr17	29111495	29111550	protein_coding	Stk38	exon	ENSMUSG00000024006	ProperStrand	57	1	-13.8259
chr12	110881050	110881114	lincRNA	Rian	intron	ENSMUSG00000091793	ProperStrand	612	chr2	22805769	22808974	protein_coding	Abi1	exon	ENSMUSG00000058835	ProperStrand	24	3	-20.6694
chr11	55209397	55212056	protein_coding	Sparc	exon	ENSMUSG00000018593	ProperStrand	48	chr11	97643001	97643091	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.8600
chr9	21207596	21207677	protein_coding	Ilf3	exon	ENSMUSG00000032178	ProperStrand	164	chr13	23663260	23663293	protein_coding	Hist1h2bg	utr5	ENSMUSG00000058385	ProperStrand	29	3	-21.5768
chr11	101320217	101320310	protein_coding	Vat1	utr3	ENSMUSG00000034993	ProperStrand	69	chr14	34776834	34776850	protein_coding	Rbp3	utr3	ENSMUSG00000041534	NonProperStrand	41	1	-13.8020
chr19	5796870	5802125	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr18	35714159	35714260	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	8	-2.6911
chr15	79248553	79248619	protein_coding	Csnk1e	utr3	ENSMUSG00000022433	ProperStrand	59	chr19	8800383	8800455	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-3.5610
chr12	112111970	112112070	protein_coding	Cinp	utr3	ENSMUSG00000021276	ProperStrand	18	chr2	130101242	130101308	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-9.0144
chr2	155211629	155211646	protein_coding	Trp53inp2	exon	ENSMUSG00000038375	NonProperStrand	2	chr1	9932564	9932625	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-15.1916
chr4	131908270	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	chr14	63287570	63287611	snoRNA	ENSMUSG00000089531_SNORA73	.	ENSMUSG00000089531	ProperStrand	123	9	-10.5297
chr8	113665583	113665640	lincRNA	9430091E24Rik	intron	ENSMUSG00000084808	ProperStrand	9	chr4	43505808	43505898	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	1	-6.7740
chr12	12947052	12947092	protein_coding	Mycn	exon	ENSMUSG00000037169	ProperStrand	24	chr4	122968584	122968655	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-8.1141
chr5	54016257	54031426	protein_coding	Rbpj	intron	ENSMUSG00000039191	ProperStrand	96	chr4	131908256	131908409	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-1.6544
chr11	96662807	96662873	protein_coding	Cbx1	exon	ENSMUSG00000018666	ProperStrand	14	chr9	15119976	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	2	-16.2092
chr2	143692881	143692971	LTR	MLT1B	MaLR	chr2MLT1B143692904	ProperStrand	1	chr11	59952439	59952529	protein_coding	Rai1	intron	ENSMUSG00000062115	NonProperStrand	81	1	-inf
chr14	51427116	51427182	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	1	-5.3671
chr9	123541402	123541418	protein_coding	Slc6a20b	exon	ENSMUSG00000025243	ProperStrand	16	chr5	121655016	121655044	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-6.3246
chr1	183849458	183849517	protein_coding	Enah	exon	ENSMUSG00000022995	ProperStrand	196	chr4	69884088	69884104	protein_coding	Cdk5rap2	utr3	ENSMUSG00000039298	ProperStrand	810	1	-5.7676
chr15	81602266	81602282	protein_coding	Zc3h7b	exon	ENSMUSG00000022390	ProperStrand	35	chr9	120038611	120038656	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.0343
chr6	125111967	125115589	protein_coding	Gapdh	exon	ENSMUSG00000057666	ProperStrand	356	chr16	23111689	23111798	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	8	-3.8098
chr9	62641487	62645422	protein_coding	Fem1b	utr3	ENSMUSG00000032244	ProperStrand	111	chr16	23110872	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	11	-6.1734
chr13	9833561	9833660	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr9	66795488	66797184	protein_coding	Rps27l	utr3	ENSMUSG00000036781	ProperStrand	11	1	-8.3583
chr7	103956855	103956872	protein_coding	Odz4	intron	ENSMUSG00000048078	ProperStrand	93	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.5023
chr16	84972883	84972899	protein_coding	App	intron	ENSMUSG00000022892	NonProperStrand	101	chr8	86096326	86096354	protein_coding	Tecr	exon	ENSMUSG00000031708	ProperStrand	100	1	-11.2411
chr7	138062660	138062676	protein_coding	Fgfr2	intron	ENSMUSG00000030849	NonProperStrand	95	chr9	15118308	15118342	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-2.6453
chr17	35972535	35973611	protein_coding	Tubb5	exon	ENSMUSG00000001525	ProperStrand	624	chr15	34370545	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	19	-25.2442
chr7	52032706	52032753	protein_coding	Vrk3	utr3	ENSMUSG00000002205	ProperStrand	22	chr7	117189899	117190009	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-5.2455
chr4	108278918	108278934	protein_coding	Orc1	exon	ENSMUSG00000028587	ProperStrand	161	chr1	88252837	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-4.7138
chr11	68716816	68717909	protein_coding	Rpl26	exon	ENSMUSG00000060938	ProperStrand	130	chr9	15119631	15119663	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.3970
chr11	40515961	40515988	protein_coding	Hmmr	utr3	ENSMUSG00000020330	ProperStrand	61	chr15	98350146	98350231	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-4.7287
chr18	9213432	9213449	protein_coding	Fzd8	exon	ENSMUSG00000036904	ProperStrand	3	chr2	89721421	89721438	protein_coding	Olfr1257	exon	ENSMUSG00000049057	NonProperStrand	1	1	-inf
chr7	27466699	27466715	protein_coding	Cyp2b23	exon	ENSMUSG00000040650	ProperStrand	39	chr4	131866608	131866659	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	3	-19.5796
chr18	32056649	32062321	protein_coding	Wdr33	exon	ENSMUSG00000024400	ProperStrand	48	chr4	131908719	131908892	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-2.8913
chr7	29595965	29595982	protein_coding	Hnrnpl	exon	ENSMUSG00000015165	ProperStrand	150	chr7	52715053	52715079	protein_coding	Ftl1	utr5	ENSMUSG00000050708	ProperStrand	807	1	-6.2987
chr2	38013654	38013744	protein_coding	Dennd1a	intron	ENSMUSG00000035392	ProperStrand	24	chr2	38754695	38754785	protein_coding	Nr6a1	intron	ENSMUSG00000063972	ProperStrand	52	1	-15.4532
chr7	108971290	108971306	protein_coding	Inppl1	utr3	ENSMUSG00000032737	ProperStrand	272	chr1	162965981	162965999	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-1.1328
chr16	96280303	96280319	protein_coding	Brwd1	exon	ENSMUSG00000022914	NonProperStrand	13	chr14	76247752	76247770	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-7.1966
chr11	63885336	63887052	protein_coding	Cox10	exon	ENSMUSG00000042148	NonProperStrand	187	chr14	31827503	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-4.7226
chrX	20235483	20235499	protein_coding	Uba1	utr5	ENSMUSG00000001924	ProperStrand	156	chr3	97904275	97904298	protein_coding	Notch2	exon	ENSMUSG00000027878	ProperStrand	86	1	-10.6722
chr19	53312952	53313926	protein_coding	Add3	exon	ENSMUSG00000025026	ProperStrand	27	chr19	8963096	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.6995
chr13	55907670	55907686	protein_coding	Catsper3	exon	ENSMUSG00000021499	NonProperStrand	7	chr4	56910606	56910629	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-10.5007
chr13	56175470	56175515	protein_coding	H2afy	utr3	ENSMUSG00000015937	ProperStrand	103	chr2	158182156	158182194	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	3	-9.6655
chr15	79913290	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr8	97227892	97227977	tRNA	tRNA1008-LeuCAG	.	394351	ProperStrand	18	1	-5.9221
chr4	114741487	114741504	protein_coding	Tal1	utr3	ENSMUSG00000028717	NonProperStrand	69	chr19	8963087	8963165	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.0449
chr19	59085796	59085896	protein_coding	4930506M07Rik	intron	ENSMUSG00000041362	ProperStrand	36	chr1	162966832	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	7	-20.3645
chr18	75160711	75160778	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	chr1	173041632	173041649	tRNA	tRNA710-ValCAC	.	406505	ProperStrand	206	3	-15.2708
chr2	90235303	90235348	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	70700668	70707081	protein_coding	Rabep1	exon	ENSMUSG00000020817	ProperStrand	16	1	-7.0757
chr4	151730301	151730737	protein_coding	Chd5	exon	ENSMUSG00000005045	NonProperStrand	147	chr1	38050873	38050919	protein_coding	Txndc9	exon	ENSMUSG00000058407	ProperStrand	2	1	-19.8521
chr8	64017614	64028378	protein_coding	Palld	exon	ENSMUSG00000058056	NonProperStrand	125	chr1	129271708	129271816	snoRNA	ENSMUSG00000065687_snoU6-53	.	ENSMUSG00000065687	ProperStrand	78	1	-11.3119
chr5	151344045	151344062	protein_coding	Brca2	exon	ENSMUSG00000041147	ProperStrand	75	chr2	144091723	144091813	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	ProperStrand	549	1	-8.4358
chr3	153933541	153933557	protein_coding	Slc44a5	utr3	ENSMUSG00000028360	NonProperStrand	33	chr1	89673685	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-4.3823
chr6	86370169	86370194	protein_coding-noncoding	Tia1	utr5	ENSMUSG00000071337	ProperStrand	1	chr1	59759786	59760919	protein_coding	Nop58	exon	ENSMUSG00000026020	ProperStrand	104	1	-inf
chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	chr15	34370631	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-0.9109
chr17	7499618	7503690	protein_coding	Rps6ka2	exon	ENSMUSG00000023809	ProperStrand	47	chr16	23110972	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-4.4107
chr17	88384278	88384299	protein_coding	Msh6	exon	ENSMUSG00000005370	ProperStrand	150	chr3	101259277	101259295	protein_coding	Igsf3	exon	ENSMUSG00000042035	ProperStrand	73	1	-11.0800
chr1	162965892	162967787	non_coding	Gas5	.	ENSMUSG00000053332	ProperStrand	144	chr4	131908689	131908885	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-0.7313
chr2	162896070	162896094	protein_coding	Mybl2	intron	ENSMUSG00000017861	ProperStrand	230	chr13	24824232	24824248	protein_coding	Fam65b	utr3	ENSMUSG00000036006	ProperStrand	51	1	-10.9462
chr1	168239525	168239541	protein_coding	Ildr2	exon	ENSMUSG00000040612	ProperStrand	103	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.0058
chr12	25394301	25395234	protein_coding	Rrm2	exon	ENSMUSG00000020649	ProperStrand	65	chr9	64024498	64024567	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	1	-8.2053
chr7	133839584	133839606	protein_coding	Bola2	exon	ENSMUSG00000047721	ProperStrand	3	chr16	23111445	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-6.9982
chr9	40611123	40611198	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr11	97579497	97579597	protein_coding	Pip4k2b	utr3	ENSMUSG00000018547	ProperStrand	46	1	-8.6718
chr2	158204048	158204093	snoRNA	ENSMUSG00000065840_SNORA71	.	ENSMUSG00000065840	ProperStrand	107	chr17	35089192	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-4.3697
chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	chr2	18508668	18508716	tRNA	tRNA1947-AsnGTT	.	299397	ProperStrand	179	1	-3.1453
chr1	34285528	34285547	protein_coding	Dst	exon	ENSMUSG00000026131	ProperStrand	461	chr16	56035865	56035959	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	2	-8.1141
chr17	23955820	23955838	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	chr6	40123350	40123367	protein_coding	Gm5567	intron	ENSMUSG00000057716	ProperStrand	25	1	-13.2487
chr4	130768319	130768341	LINE	L1MA4A	L1	chr4L1MA4A130768185	NonProperStrand	1	chr16	33726533	33726550	protein_coding	Heg1	exon	ENSMUSG00000075254	NonProperStrand	37	1	-inf
chr2	155652279	155652356	protein_coding	Eif6	utr5	ENSMUSG00000027613	ProperStrand	42	chr14	76247720	76247810	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-4.8555
chr11	35344649	35344666	protein_coding	Slit3	intron	ENSMUSG00000056427	ProperStrand	61	chr11	69483136	69483193	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.4217
chr1	89091564	89092064	protein_coding	Chrnd	exon	ENSMUSG00000026251	ProperStrand	32	chr15	79913304	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-7.9443
chr17	12886936	12962267	protein_coding	Igf2r	exon	ENSMUSG00000023830	ProperStrand	151	chr18	33954815	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	4	-7.3421
chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr17	13112468	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	3	-1.5869
chr1	183768577	183768646	protein_coding	Lbr	exon	ENSMUSG00000004880	ProperStrand	97	chr2	26494715	26494815	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.2730
chr16	38298364	38298380	protein_coding	4932425I24Rik	exon	ENSMUSG00000022805	ProperStrand	1	chr19	43579408	43579425	protein_coding	Got1	intron	ENSMUSG00000025190	NonProperStrand	147	1	-inf
chr5	74489543	74489563	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr14	69659079	69659095	protein_coding	Stc1	utr3	ENSMUSG00000014813	ProperStrand	2	1	-13.0481
chr4	107088523	107088621	protein_coding	Tmem48	utr3	ENSMUSG00000028614	ProperStrand	42	chr17	24856620	24856682	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-7.1361
chr11	120569118	120569208	protein_coding	Aspscr1	intron	ENSMUSG00000025142	ProperStrand	53	chr7	29136551	29136641	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.5767
chrX	100463762	100463797	protein_coding	4930519F16Rik	intron	ENSMUSG00000031325	ProperStrand	2	chr16	23111704	23111794	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-8.9529
chr11	97639600	97639668	protein_coding	Rpl23	exon	ENSMUSG00000071415	ProperStrand	920	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-1.0941
chr16	34512868	34512958	protein_coding-noncoding	Kalrn	utr3	ENSMUSG00000061751	ProperStrand	1	chr16	34512672	34512762	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-inf
chr6	128380191	128380271	protein_coding	Fkbp4	utr3	ENSMUSG00000030357	ProperStrand	114	chr11	6428077	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.0854
chr10	7639492	7639544	protein_coding	Tab2	exon	ENSMUSG00000015755	ProperStrand	41	chr16	20686304	20686342	protein_coding	Eif4g1	exon	ENSMUSG00000045983	ProperStrand	199	1	-11.6767
chr14	72301755	72301771	SINE	B4	B4	chr14B472301692	NonProperStrand	99	chr3	145587424	145593371	protein_coding	Bcl10	exon	ENSMUSG00000028191	ProperStrand	14	1	-15.2815
chr17	34089443	34089477	protein_coding	Rps18	exon	ENSMUSG00000008668	ProperStrand	111	chr16	23111742	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-3.2571
chr7	73214366	73214385	protein_coding	Snrpa1	exon	ENSMUSG00000030512	ProperStrand	71	chr1	91825369	91825448	protein_coding	Gbx2	exon	ENSMUSG00000034486	ProperStrand	18	1	-15.4026
chr9	24549573	24549597	protein_coding	Tbx20	intron	ENSMUSG00000031965	NonProperStrand	110	chr16	23110472	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.4965
chr10	70541952	70541968	protein_coding	Bicc1	exon	ENSMUSG00000014329	ProperStrand	13	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.3283
chr5	66088334	66088424	protein_coding	Pds5a	intron	ENSMUSG00000029202	ProperStrand	62	chr13	96100556	96100636	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	1	-8.0026
chr11	87240289	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	chr17	35089181	35089224	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-3.2933
chr10	128005277	128005367	protein_coding	Erbb3	utr3	ENSMUSG00000018166	ProperStrand	49	chr3	108357278	108357358	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-4.9302
chr8	108089755	108089782	protein_coding	Atp6v0d1	exon	ENSMUSG00000013160	ProperStrand	35	chr12	32603618	32603634	protein_coding	Cog5	intron	ENSMUSG00000035933	ProperStrand	16	1	-17.0706
chr16	76339992	76340048	protein_coding	Nrip1	intron	ENSMUSG00000048490	ProperStrand	50	chr6	115757992	115758092	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-5.8295
chr10	80052936	80052990	protein_coding	Fam108a	utr5	ENSMUSG00000003346	ProperStrand	14	chr1	134400527	134400627	protein_coding	Rbbp5	utr3	ENSMUSG00000026439	ProperStrand	22	1	-18.3932
chr3	78873996	78874012	protein_coding	Rapgef2	exon	ENSMUSG00000062232	ProperStrand	14	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.3681
chr1	173987601	173987617	protein_coding	Nhlh1	utr5	ENSMUSG00000051251	ProperStrand	1	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-inf
chr11	69493865	69493939	protein_coding	Senp3	utr5	ENSMUSG00000005204	ProperStrand	65	chr5	74489595	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-3.6293
chr11	32635308	32635326	protein_coding	Fbxw11	exon	ENSMUSG00000020271	NonProperStrand	31	chr8	32260335	32260362	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-5.9195
chr5	97812097	97812114	protein_coding	Naa11	utr3	ENSMUSG00000046000	NonProperStrand	1	chr1	162965549	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-inf
chr3	31019184	31019284	protein_coding	Skil	utr3	ENSMUSG00000027660	ProperStrand	23	chr4	132530098	132530117	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	1	-11.5408
chr15	85866939	85866960	SINE	ID4	ID	chr15ID485866883	ProperStrand	1	chr13	76341035	76341055	protein_coding	Fam81b	intron	ENSMUSG00000078966	NonProperStrand	220	1	-inf
chr2	90235313	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	137345619	137346480	protein_coding	Nav1	exon	ENSMUSG00000009418	NonProperStrand	60	1	-4.4627
chr3	103860475	103860502	protein_coding	Magi3	exon	ENSMUSG00000052539	ProperStrand	19	chr10	110918592	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-5.6609
chr5	37220712	37220802	protein_coding	Man2b2	intron	ENSMUSG00000029119	ProperStrand	33	chr9	120039583	120039672	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	9	-19.2183
chr15	81607356	81607436	protein_coding	Zc3h7b	exon	ENSMUSG00000022390	ProperStrand	35	chr18	73835565	73837372	protein_coding	Smad4	exon	ENSMUSG00000024515	ProperStrand	51	1	-14.7337
chr7	111298437	111298453	protein_coding	Ubqlnl	exon	ENSMUSG00000051437	NonProperStrand	3	chr6	115757992	115758100	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	3	-inf
chr19	8800485	8800517	lincRNA	Snhg1	exon	ENSMUSG00000090867	ProperStrand	100	chr10	110918639	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-2.5402
chr1	83188255	83188272	protein_coding	Wdr69	intron	ENSMUSG00000053161	NonProperStrand	2	chr5	108336363	108336405	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-12.2768
chr8	49014621	49014645	protein_coding	Wwc2	intron	ENSMUSG00000031563	ProperStrand	37	chr18	35716736	35716826	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.0044
chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	chr7	16524945	16524984	protein_coding	Gltscr2	exon	ENSMUSG00000041560	ProperStrand	127	1	-6.6884
chr13	107645473	107697923	protein_coding	Ipo11	intron	ENSMUSG00000042590	ProperStrand	120	chr11	97642952	97643043	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	7	-11.9225
chr15	82980086	82980226	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr19	8799847	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	3	-1.2087
chr11	88791619	88794811	protein_coding	Scpep1	exon	ENSMUSG00000000278	ProperStrand	54	chr7	30231512	30231592	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	1	-9.0582
chr9	59526637	59526700	protein_coding	Pkm2	utr3	ENSMUSG00000032294	ProperStrand	1296	chr1	162966830	162966873	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	3	-2.9786
chrX	74905274	74905364	protein_coding	Tbl1x	utr3	ENSMUSG00000025246	ProperStrand	56	chr18	73693165	73693187	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	5	-20.9438
chr3	142351261	142351279	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr13	49779715	49779742	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-1.8905
chr13	55391546	55391563	protein_coding	Nsd1	exon	ENSMUSG00000021488	ProperStrand	186	chr18	35101686	35102747	protein_coding	Hspa9	exon	ENSMUSG00000024359	ProperStrand	166	1	-9.0044
chr8	88050664	88050747	protein_coding	Gpt2	utr3	ENSMUSG00000031700	ProperStrand	32	chr16	23111732	23111822	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-5.1666
chrX	7752870	7752886	protein_coding	Tbc1d25	exon	ENSMUSG00000039201	ProperStrand	126	chr11	6428099	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.9248
chr5	136508304	136508394	protein_coding	Dtx2	utr3	ENSMUSG00000004947	NonProperStrand	2	chr16	57391619	57391709	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	2	-inf
chr9	55057284	55061717	protein_coding	Fbxo22	exon	ENSMUSG00000032309	ProperStrand	79	chr14	33005085	33005139	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-3.4821
chr2	104667730	104667758	SINE	RSINE1	B4	chr2RSINE1104667722	ProperStrand	2	chr2	158203969	158204033	snoRNA	ENSMUSG00000065840_SNORA71	.	ENSMUSG00000065840	ProperStrand	107	2	-inf
chr8	125627806	125627835	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	chr19	59047869	59047886	protein_coding	4930506M07Rik	utr3	ENSMUSG00000041362	NonProperStrand	21	2	-20.1718
chr5	141090405	141090422	protein_coding	Lfng	exon	ENSMUSG00000029570	NonProperStrand	92	chr7	4740985	4741085	protein_coding	2210411K11Rik	exon	ENSMUSG00000030431	ProperStrand	1	1	-inf
chr4	155366536	155366552	protein_coding	B3galt6	exon	ENSMUSG00000050796	ProperStrand	40	chr4	131865855	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.4299
chr1	120576007	120580700	protein_coding	Tfcp2l1	utr3	ENSMUSG00000026380	ProperStrand	158	chr16	23110841	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-0.7481
chr8	73130268	73130358	protein_coding	Ssbp4	intron	ENSMUSG00000070003	ProperStrand	39	chr4	131866155	131866235	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	9	-18.9012
chr7	139591703	139591719	protein_coding	Fgfr2	intron	ENSMUSG00000030849	NonProperStrand	95	chr3	68889165	68889212	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-2.4479
chr11	77995189	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	chr13	49779689	49779779	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-0.7753
chr9	119664282	119664299	protein_coding	Scn11a	exon	ENSMUSG00000034115	ProperStrand	55	chr10	90581034	90581147	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-4.9754
chr6	71222030	71232147	protein_coding	Krcc1	utr5	ENSMUSG00000053012	ProperStrand	6	chr1	162965552	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-7.8657
chr16	31872994	31873012	protein_coding	Dlg1	utr3	ENSMUSG00000022770	NonProperStrand	4	chr17	71195512	71195576	protein_coding	Tgif1	exon	ENSMUSG00000047407	ProperStrand	64	2	-20.2491
chr2	90235292	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	121655015	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	34	-6.0660
chr5	74489231	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr12	109448231	109448283	protein_coding	Ccdc85c	intron	ENSMUSG00000084883	ProperStrand	157	1	-3.7815
chr16	23109143	23110836	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr7	29136525	29136653	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	7	-2.5482
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr2	164251069	164251188	protein_coding	Sdc4	utr3	ENSMUSG00000017009	ProperStrand	177	4	-18.5580
chr17	35973200	35973644	protein_coding	Tubb5	exon	ENSMUSG00000001525	ProperStrand	624	chr5	145532299	145532379	protein_coding	Trrap	intron	ENSMUSG00000045482	ProperStrand	399	1	-4.8960
chr18	12927062	12929839	protein_coding	Osbpl1a	exon	ENSMUSG00000044252	ProperStrand	39	chrX	113862541	113862570	snoRNA	ENSMUSG00000088518_SNORA9	.	ENSMUSG00000088518	ProperStrand	280	6	-19.9590
chr5	65167417	65167435	LTR	ORR1D2-int	MaLR	chr5ORR1D2-int65167029	NonProperStrand	1	chr19	8963033	8963083	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-inf
mmu-miR-1949	1	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr11	116938610	116938710	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-1.5021
chr2	32781400	32781417	protein_coding	Lrsam1	utr3	ENSMUSG00000026792	ProperStrand	80	chr5	138741042	138741232	protein_coding	Stag3	exon	ENSMUSG00000036928	ProperStrand	53	1	-12.9855
chr5	74489214	74489330	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr6	51872316	51872332	protein_coding	Skap2	exon	ENSMUSG00000059182	NonProperStrand	34	2	-10.9036
chr8	124321903	124321993	protein_coding	Klhdc4	exon	ENSMUSG00000040263	ProperStrand	13	chr7	117166723	117166803	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-7.8685
chr8	129468780	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	NonProperStrand	22	chr7	118219574	118219617	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	NonProperStrand	8	1	-18.6015
chr6	128322023	128322560	protein_coding	Foxm1	exon	ENSMUSG00000001517	ProperStrand	31	chr7	118219574	118219634	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-5.4472
chr17	35389931	35390031	protein_coding	Ddx39b	exon	ENSMUSG00000019432	ProperStrand	119	chr9	15119646	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-2.8493
chr3	136856024	136856041	LINE	L1_Mus4	L1	chr3L1_Mus4136855983	ProperStrand	8	chr9	44598075	44598093	protein_coding	Ift46	intron	ENSMUSG00000002031	NonProperStrand	28	1	-18.2008
chr9	110544350	110544366	protein_coding	Nbeal2	exon	ENSMUSG00000056724	ProperStrand	161	chr19	8963023	8963077	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-1.7162
chr7	134123728	134123829	protein_coding	Cdipt	utr3	ENSMUSG00000030682	ProperStrand	21	chr4	131908687	131908730	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	6	-16.6730
chr11	53501699	53505622	protein_coding	Rad50	exon	ENSMUSG00000020380	ProperStrand	61	chr7	4074247	4074290	protein_coding	Ttyh1	intron	ENSMUSG00000030428	ProperStrand	10	1	-16.8766
chr14	121319152	121345983	protein_coding	Ipo5	exon	ENSMUSG00000030662	ProperStrand	135	chr16	23110829	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	7	-1.6498
chr1	34870801	34870901	protein_coding	Fam168b	utr3	ENSMUSG00000037503	ProperStrand	23	chr18	35716832	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.8840
chr9	68619074	68619090	protein_coding	Rora	intron	ENSMUSG00000032238	NonProperStrand	30	chr19	8799581	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-8.1537
chr15	58848547	58848576	protein_coding	Mtss1	intron	ENSMUSG00000022353	ProperStrand	68	chr16	23111741	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.7080
chr2	32086876	32086966	protein_coding	Prrc2b	utr3	ENSMUSG00000039262	ProperStrand	344	chr11	68886946	68887026	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-1.2070
chr2	103469564	103469654	protein_coding	Abtb2	intron	ENSMUSG00000032724	ProperStrand	12	chr7	150717345	150717425	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-8.7461
chrX	98643036	98643062	protein_coding	Nono	exon	ENSMUSG00000031311	ProperStrand	102	chr2	26493366	26493479	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	7	-18.4721
chr19	10620687	10620703	protein_coding	Cpsf7	utr3	ENSMUSG00000034820	ProperStrand	66	chr19	8799581	8799599	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-6.5777
chr6	29362814	29362846	protein_coding	Ccdc136	intron	ENSMUSG00000029769	ProperStrand	19	chr7	29136541	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	4	-14.5305
chr5	31363582	31363682	protein_coding	Cad	exon	ENSMUSG00000013629	ProperStrand	260	chr1	162965562	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-0.9625
chr8	36651113	36651134	lincRNA	Gm16793	intron	ENSMUSG00000087118	ProperStrand	3	chr16	23110907	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr2	90235303	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	109793491	109793508	protein_coding	Lgr4	intron	ENSMUSG00000050199	ProperStrand	27	1	-6.0220
chr17	46389183	46389257	protein_coding	Yipf3	utr3	ENSMUSG00000071074	ProperStrand	2	chr7	29136535	29136625	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-9.5181
chr13	104851919	104859361	protein_coding	Nln	exon	ENSMUSG00000021710	ProperStrand	47	chr4	131866240	131866283	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-4.1232
chr15	79358834	79372951	protein_coding	Ddx17	exon	ENSMUSG00000055065	ProperStrand	140	chr16	23110921	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	9	-2.7545
chr7	53049197	53049227	protein_coding	Lmtk3	exon	ENSMUSG00000062044	ProperStrand	5	chr13	49779745	49779805	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-12.1629
chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	chr11	106362304	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-2.3032
chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	chr5	108333894	108336286	protein_coding	Rpl5	exon	ENSMUSG00000058558	ProperStrand	235	1	-7.7479
chr8	106878921	106878944	protein_coding	Cmtm4	utr3	ENSMUSG00000051578	ProperStrand	6	chr16	23110829	23110874	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.7876
chr2	176866231	176866311	protein_coding	Gm14401	intron	ENSMUSG00000078872	ProperStrand	1	chr4	131908687	131908746	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-inf
chr8	97106845	97106870	protein_coding	Fam192a	exon	ENSMUSG00000031774	ProperStrand	11	chr1	90123798	90124639	protein_coding	Heatr7b1	utr5	ENSMUSG00000079429	ProperStrand	147	1	-14.9853
chr2	60190155	60190256	protein_coding	Ly75	exon	ENSMUSG00000026980	ProperStrand	59	chr4	131908236	131908276	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.4429
chr10	127480574	127480590	protein_coding	Naca	exon	ENSMUSG00000061315	NonProperStrand	13	chr17	35299563	35299629	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-7.8283
chr4	41240170	41240209	protein_coding	Dcaf12	exon	ENSMUSG00000028436	ProperStrand	33	chr4	131908356	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-6.3682
chr9	7768232	7768329	protein_coding	Tmem123	intron	ENSMUSG00000050912	ProperStrand	17	chr6	124665386	124665405	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	3	-19.9453
chr9	92502408	92502489	protein_coding	Plod2	utr3	ENSMUSG00000032374	ProperStrand	52	chr7	116663714	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	7	-18.5733
chr2	167311943	167311960	protein_coding-noncoding	Spata2	utr3	ENSMUSG00000047030	NonProperStrand	6	chr11	6520321	6520421	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	1	-12.4697
chr9	61761207	61761296	protein_coding	Rplp1	exon	ENSMUSG00000007892	ProperStrand	116	chr4	131866156	131866182	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-2.4877
chr11	102929003	102929073	protein_coding	Nmt1	utr3	ENSMUSG00000020936	ProperStrand	43	chr16	37384897	37384913	protein_coding	Stxbp5l	utr5	ENSMUSG00000022829	ProperStrand	332	1	-10.5566
chr11	102429344	102429363	SINE	PB1	Alu	chr11PB1102429271	ProperStrand	9	chr19	8799829	8799897	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	3	-19.0401
chr3	89577583	89577685	protein_coding	Ube2q1	utr5	ENSMUSG00000042572	ProperStrand	32	chr12	82317769	82317785	protein_coding	Slc8a3	exon	ENSMUSG00000079055	ProperStrand	126	1	-13.0937
chr15	35458324	35458340	protein_coding	Vps13b	intron	ENSMUSG00000037646	ProperStrand	56	chr8	73419683	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.2551
chr6	120275182	120275249	protein_coding	Ccdc77	utr3	ENSMUSG00000030177	ProperStrand	17	chr15	31399364	31399380	protein_coding	March6	exon	ENSMUSG00000039100	NonProperStrand	8	1	-19.2248
chr10	121461288	121461378	protein_coding	Srgap1	intron	ENSMUSG00000020121	ProperStrand	33	chr11	62416578	62416654	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-6.3427
chr4	115484059	115484093	protein_coding	Atpaf1	utr3	ENSMUSG00000028710	ProperStrand	202	chr12	17553012	17553087	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	3	-7.2674
chr2	48927391	48927407	protein_coding	Mbd5	intron	ENSMUSG00000036792	NonProperStrand	25	chr4	131865451	131865508	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-5.6979
chr6	49067195	49067285	protein_coding	Igf2bp3	exon	ENSMUSG00000029814	ProperStrand	23	chr9	120038564	120038644	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.8435
chr5	138723126	138723179	protein_coding	Stag3	exon	ENSMUSG00000036928	ProperStrand	53	chr4	131908689	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-2.6528
chr13	97266647	97266664	protein_coding	Polk	exon	ENSMUSG00000021668	NonProperStrand	25	chr7	116664755	116664779	protein_coding	Rpl27a	intron	ENSMUSG00000046364	ProperStrand	149	1	-13.2607
chr8	73419659	73419750	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	chr7	51505507	51505587	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	5	-2.2644
chr11	4978945	4979035	protein_coding-noncoding	Ewsr1	utr3	ENSMUSG00000009079	ProperStrand	3	chr9	120039545	120039625	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-9.5119
chr6	122436386	122436403	Simple_repeat	(CTCG)n	Simple_repeat	chr6(CTCG)n122436261	NonProperStrand	1	chr19	10696561	10696613	protein_coding	Ddb1	exon	ENSMUSG00000024740	ProperStrand	304	1	-inf
chr1	153208719	153210275	protein_coding	Ivns1abp	exon	ENSMUSG00000023150	ProperStrand	51	chr18	33954825	33954915	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-3.8071
mmu-miR-6240	1	25	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr4	131865852	131865988	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	36	-1.9057
chr12	99497602	99497618	protein_coding	Galc	utr5	ENSMUSG00000021003	NonProperStrand	65	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.6453
chr3	103766705	103766721	protein_coding	Rsbn1	utr3	ENSMUSG00000044098	NonProperStrand	17	chr19	8800375	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-5.9706
chr6	24684480	24684497	protein_coding	Hyal6	exon	ENSMUSG00000029679	NonProperStrand	114	chr8	20005994	20006080	pseudogene	2610005L07Rik	.	ENSMUSG00000071793	ProperStrand	40	1	-12.8431
chr15	8101768	8103129	protein_coding	Nup155	exon	ENSMUSG00000022142	ProperStrand	91	chr4	131908236	131908332	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	8	-11.1758
chr7	135915850	135920348	protein_coding	Sec23ip	exon	ENSMUSG00000055319	ProperStrand	27	chr11	69483174	69483254	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.8930
chr10	74095003	74095019	protein_coding	Pcdh15	utr3	ENSMUSG00000052613	ProperStrand	33	chr11	68853906	68853960	tRNA	tRNA396-ProCGG	.	1761227	ProperStrand	48	1	-14.9593
chr1	154997967	154999167	protein_coding	Lamc2	exon	ENSMUSG00000026479	ProperStrand	4	chr11	97642955	97643055	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-7.8635
chr12	87030317	87049503	protein_coding	Batf	exon	ENSMUSG00000034266	ProperStrand	28	chr8	73419741	73419773	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.5584
chr15	74461759	74461776	protein_coding	1700016M24Rik	intron	ENSMUSG00000022603	ProperStrand	1	chr14	76247711	76247835	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-inf
chr17	28552938	28623006	protein_coding	Fkbp5	exon	ENSMUSG00000024222	ProperStrand	44	chr10	110918549	110918639	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-6.7760
chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	chr11	62416951	62416977	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-2.4759
chr19	3906682	3906698	protein_coding	Tcirg1	utr5	ENSMUSG00000001750	NonProperStrand	15	chr6	113496661	113498391	protein_coding	Fancd2	exon	ENSMUSG00000034023	ProperStrand	65	1	-15.9816
chr2	90235292	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	87083463	87083480	protein_coding	Cacna1a	exon	ENSMUSG00000034656	NonProperStrand	37	1	-5.3993
chr13	3883460	3883531	protein_coding	Net1	exon	ENSMUSG00000021215	ProperStrand	32	chr9	15119738	15119768	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.7682
chr4	138794883	138813190	protein_coding	Capzb	exon	ENSMUSG00000028745	NonProperStrand	21	chr8	73419649	73419745	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	NonProperStrand	53	1	-15.6687
chr19	36964516	36965339	protein_coding	Tnks2	utr3	ENSMUSG00000024811	ProperStrand	133	chr19	8963025	8963043	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	4	-4.8926
chr2	31507664	31507686	protein_coding	Prdm12	intron	ENSMUSG00000079466	NonProperStrand	1	chr18	35716770	35716821	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-inf
chr2	168426898	168426915	protein_coding	Nfatc2	intron	ENSMUSG00000027544	NonProperStrand	49	chr4	56890426	56890541	protein_coding	D730040F13Rik	utr3	ENSMUSG00000055296	ProperStrand	48	1	-14.1723
chr7	86812732	86814371	protein_coding	5730590G19Rik	exon	ENSMUSG00000046591	ProperStrand	45	chr7	116664817	116664897	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.0553
chr7	140955178	140955198	protein_coding	Dhx32	intron	ENSMUSG00000030986	ProperStrand	100	chr7	117189864	117189922	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	2	-8.5552
chr9	78023109	78023145	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr15	71624756	71624798	snoRNA	ENSMUSG00000088895_SNORA81	.	ENSMUSG00000088895	ProperStrand	348	2	-4.5344
chr6	93685798	93685888	protein_coding	Magi1	intron	ENSMUSG00000045095	ProperStrand	106	chr9	15119338	15119418	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	5	-16.4442
chr2	179628011	179628029	protein_coding	Cdh4	exon	ENSMUSG00000000305	ProperStrand	171	chr9	120038466	120038529	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-2.5431
chr2	27281841	27281857	protein_coding	Vav2	exon	ENSMUSG00000009621	NonProperStrand	31	chr2	4984859	4984877	protein_coding	Optn	intron	ENSMUSG00000026672	NonProperStrand	3	1	-inf
chr17	47811688	47811754	protein_coding	Usp49	exon	ENSMUSG00000090115	ProperStrand	8	chr16	23110555	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-6.3329
chr12	111932792	111932871	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr8	32271284	32272251	protein_coding	Mak16	exon	ENSMUSG00000031578	ProperStrand	26	1	-9.9457
chr17	39979943	39979973	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr16	23109045	23109093	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-1.6548
chr15	98604924	98606960	protein_coding	Wnt10b	exon	ENSMUSG00000022996	NonProperStrand	189	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-3.0587
chr11	3143253	3143319	protein_coding	Eif4enif1	exon	ENSMUSG00000020454	ProperStrand	575	chr2	166890527	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-3.2078
chr3	46250662	46250678	protein_coding	Pabpc4l	exon	ENSMUSG00000090919	ProperStrand	137	chr18	73693171	73693187	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-3.9417
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	88036093	88036190	protein_coding	Epcam	utr5	ENSMUSG00000045394	ProperStrand	43	1	-5.1055
chr2	150671979	150672012	protein_coding	Abhd12	exon	ENSMUSG00000032046	ProperStrand	38	chr4	131865855	131865945	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.5179
chr13	38068109	38068178	protein_coding	Ssr1	utr3	ENSMUSG00000021427	ProperStrand	65	chr1	133832712	133832812	protein_coding	Nucks1	utr3	ENSMUSG00000026434	ProperStrand	59	2	-18.9490
chr9	39882020	39882036	protein_coding	Olfr982	exon	ENSMUSG00000049010	NonProperStrand	35	chr10	21322973	21322990	protein_coding	1700020N01Rik	intron	ENSMUSG00000050844	ProperStrand	12	1	-17.5832
chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	chr2	130103449	130103471	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-3.8477
chr15	20139515	20139595	LINE	L1_Mur1	L1	chr15L1_Mur120139123	NonProperStrand	1	chr17	22036451	22036541	protein_coding	2210404O09Rik	intron	ENSMUSG00000078546	ProperStrand	4	1	-inf
chr18	50983235	50983315	LTR	MTC	MaLR	chr18MTC50983193	NonProperStrand	1	chrX	103998265	103998355	LTR	MTC	MaLR	chrXMTC103998026	NonProperStrand	1	1	-inf
chr17	35521394	35521474	protein_coding	H2-Q4	utr3	ENSMUSG00000035929	NonProperStrand	10	chr15	89092335	89092425	protein_coding	Ppp6r2	intron	ENSMUSG00000036561	ProperStrand	8	1	-19.7808
chr15	31388563	31388580	protein_coding	March6	utr3	ENSMUSG00000039100	ProperStrand	94	chr1	162967514	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-2.6710
chr19	6366495	6374191	protein_coding	Sf1	intron	ENSMUSG00000024949	ProperStrand	251	chr16	23110454	23110556	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	7	-6.7792
chr15	84120819	84120875	protein_coding	Parvb	exon	ENSMUSG00000022438	ProperStrand	127	chr8	125731536	125731552	protein_coding	Gm20388	intron	ENSMUSG00000092329	ProperStrand	295	1	-8.6195
chr1	59539683	59539700	protein_coding	Fzd7	utr5	ENSMUSG00000041075	ProperStrand	373	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	2	-5.3352
chr3	153575089	153575168	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	chr1	162965531	162966814	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	4	-1.3670
chr1	30861328	30861387	protein_coding	Phf3	exon	ENSMUSG00000048874	ProperStrand	102	chr8	106919519	106919536	protein_coding	Cmtm4	exon	ENSMUSG00000051578	ProperStrand	6	1	-16.9302
chr7	16866255	16866355	protein_coding-noncoding	Ccdc9	utr3	ENSMUSG00000041375	ProperStrand	1	chr2	158182156	158182200	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-inf
chr5	122804482	122810108	protein_coding	Vps29	exon	ENSMUSG00000029462	ProperStrand	8	chr11	99006524	99006614	protein_coding	Ccr7	exon	ENSMUSG00000037944	ProperStrand	47	1	-18.1801
chr13	99086843	99086859	protein_coding	Btf3	utr5	ENSMUSG00000021660	ProperStrand	64	chr18	60937530	60938088	protein_coding	Rps14	exon	ENSMUSG00000024608	ProperStrand	154	1	-11.2916
chr13	96100590	96100692	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	chr5	130300452	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	6	-0.7435
chr14	60284788	60284805	protein_coding	Atp8a2	intron	ENSMUSG00000021983	NonProperStrand	23	chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	1	-10.8427
chr7	133726521	133726538	protein_coding	Cln3	exon	ENSMUSG00000030720	ProperStrand	87	chr4	131908356	131908410	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.9254
chr11	68813957	68813998	protein_coding	Pfas	exon	ENSMUSG00000020899	ProperStrand	53	chr6	86383251	86383268	protein_coding	Tia1	utr3	ENSMUSG00000071337	ProperStrand	5	1	-18.2550
chr6	82686690	82686730	protein_coding	Hk2	exon	ENSMUSG00000000628	ProperStrand	88	chr15	76346673	76346690	protein_coding	Scrt1	utr3	ENSMUSG00000048385	NonProperStrand	13	1	-15.6447
chr14	70983218	70983237	protein_coding	Fam160b2	utr3	ENSMUSG00000022095	ProperStrand	24	chr10	23505179	23505262	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.6868
chr16	91628787	91628864	protein_coding	Gart	exon	ENSMUSG00000022962	ProperStrand	200	chr7	117189995	117190015	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-1.3487
chr15	34213619	34213673	protein_coding	Laptm4b	utr3	ENSMUSG00000022257	ProperStrand	24	chr2	168592610	168592644	protein_coding	Sall4	utr5	ENSMUSG00000027547	ProperStrand	82	3	-20.8725
chr13	56732597	56732617	protein_coding	Tgfbi	exon	ENSMUSG00000035493	NonProperStrand	4	chr4	131908839	131908899	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-6.2660
chr2	70927899	70927915	protein_coding	Dcaf17	exon	ENSMUSG00000041966	NonProperStrand	89	chr7	116664817	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-3.4515
chr8	13759158	13779301	protein_coding	Cdc16	exon	ENSMUSG00000038416	ProperStrand	28	chr16	23110837	23110992	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-7.0980
chr5	147922357	147922427	protein_coding	Polr1d	exon	ENSMUSG00000029642	ProperStrand	23	chr2	158205274	158205364	snoRNA	ENSMUSG00000064585_SNORA71	.	ENSMUSG00000064585	ProperStrand	418	1	-11.3660
chr2	38857105	38857122	protein_coding	Rpl35	utr3	ENSMUSG00000062997	ProperStrand	68	chr9	120039553	120039643	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.0922
chr16	11144186	11144276	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr5	138070627	138074863	protein_coding	Lrch4	exon	ENSMUSG00000093445	NonProperStrand	8	1	-14.5883
chr11	102266226	102266368	protein_coding	Slc25a39	exon	ENSMUSG00000018677	ProperStrand	35	chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	1	-11.1622
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr2	26768369	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	5	-4.3979
chr10	75359822	75360194	protein_coding	Smarcb1	exon	ENSMUSG00000000902	ProperStrand	109	chr15	48623472	48623489	protein_coding	Csmd3	utr5	ENSMUSG00000022311	ProperStrand	23	1	-14.0553
chrX	39189714	39191332	protein_coding	Thoc2	exon	ENSMUSG00000037475	ProperStrand	30	chr6	124665483	124665522	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	3	-18.2516
chr19	10059077	10059272	protein_coding	Fth1	exon	ENSMUSG00000024661	ProperStrand	75	chr2	26494708	26494759	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.7116
chr10	99939254	99939354	protein_coding	Tmtc3	exon	ENSMUSG00000036676	ProperStrand	53	chr17	24857752	24857795	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	10	-19.3401
chr6	67221991	67222195	protein_coding	Serbp1	exon	ENSMUSG00000036371	ProperStrand	261	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-4.8411
chr15	79913288	79913339	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr2	155453472	155454250	protein_coding	Myh7b	exon	ENSMUSG00000074652	ProperStrand	23	1	-5.4333
chr14	76956323	76956339	protein_coding	Serp2	utr5	ENSMUSG00000052584	NonProperStrand	41	chr11	6428088	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.8955
chr3	96654255	96654271	protein_coding	Pdzk1	exon	ENSMUSG00000038298	ProperStrand	101	chr6	71832629	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-4.6026
chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr9	107810701	107813856	protein_coding	Mst1r	exon	ENSMUSG00000032584	NonProperStrand	30	1	-7.8385
chr11	97189496	97189818	protein_coding	Mrpl45	exon	ENSMUSG00000018882	ProperStrand	12	chr16	23111452	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-10.0786
chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	chr15	98350217	98350281	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-1.2362
chr9	110842435	110842544	protein_coding	Tdgf1	utr3	ENSMUSG00000032494	ProperStrand	218	chr14	56159295	56159312	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	2	-13.2985
chr10	79440282	79440314	protein_coding	ORF61	exon	ENSMUSG00000013858	ProperStrand	71	chr7	86609696	86609796	protein_coding	Polg	exon	ENSMUSG00000039176	ProperStrand	93	1	-12.0942
chr4	131908712	131908811	lincRNA	Gm17300	intron	ENSMUSG00000091021	ProperStrand	109	chr4	43505864	43505931	protein_coding	Ccdc107	intron	ENSMUSG00000028461	ProperStrand	69	2	-18.6010
chrX	71517821	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	chr11	77995189	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	8	-8.4701
chr2	31463619	31463719	protein_coding	Fubp3	exon	ENSMUSG00000026843	ProperStrand	35	chr1	162967514	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.4897
chr17	4082149	4082249	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr14	33005038	33005094	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-1.2006
chr13	30338190	30338207	protein_coding	Mboat1	utr3	ENSMUSG00000038732	NonProperStrand	148	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-3.0907
chr12	85029394	85029412	protein_coding	Psen1	intron	ENSMUSG00000019969	ProperStrand	20	chr1	18204299	18204315	pseudogene	Defb44-ps	.	ENSMUSG00000070977	ProperStrand	37	1	-16.5268
chr9	50816824	50816841	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	chr13	76341035	76341055	protein_coding	Fam81b	intron	ENSMUSG00000078966	NonProperStrand	220	1	-9.2042
chr6	85418138	85418218	protein_coding	Cct7	exon	ENSMUSG00000030007	ProperStrand	173	chr17	35299510	35299600	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-2.8163
chr18	21005793	21009428	protein_coding	Trappc8	exon	ENSMUSG00000033382	ProperStrand	43	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.8490
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	1	-3.7814
chr4	126559848	126566767	protein_coding	Zmym4	exon	ENSMUSG00000042446	ProperStrand	94	chr5	108334195	108334254	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-3.9658
chr17	39381287	39381377	LINE	Lx3C	L1	chr17Lx3C39381226	NonProperStrand	1	chr8	77578440	77578520	protein_coding	Tom1	intron	ENSMUSG00000042870	NonProperStrand	1	1	-inf
chr7	34927715	34927742	protein_coding-noncoding	Uba2	utr3	ENSMUSG00000052997	ProperStrand	1	chr7	128788723	128788813	protein_coding	Usp31	utr3	ENSMUSG00000063317	ProperStrand	35	1	-inf
chr11	69870769	69870785	protein_coding	Asgr1	exon	ENSMUSG00000020884	NonProperStrand	145	chr4	101331430	101331464	protein_coding	Leprot	utr3	ENSMUSG00000035212	ProperStrand	22	1	-13.5760
chr1	75484537	75484553	protein_coding	Obsl1	exon	ENSMUSG00000026211	NonProperStrand	192	chr9	19302098	19302116	protein_coding	Olfr851	exon	ENSMUSG00000052625	NonProperStrand	2	1	-19.1664
chr14	21320534	21320558	protein_coding	Ppp3cb	utr3	ENSMUSG00000021816	ProperStrand	17	chr8	86600121	86600141	protein_coding	Rfx1	intron	ENSMUSG00000031706	NonProperStrand	5	1	-19.9083
chr17	35151627	35151886	protein_coding	Vars	exon	ENSMUSG00000007029	ProperStrand	121	chr16	32243797	32243846	snoRNA	ENSMUSG00000080440_SNORA79	.	ENSMUSG00000080440	ProperStrand	140	1	-10.2041
chr2	178194847	178194864	protein_coding	Cdh26	exon	ENSMUSG00000039155	NonProperStrand	77	chr11	55296223	55296276	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	2	-9.2858
chrX	101158800	101158900	protein_coding	Rlim	exon	ENSMUSG00000056537	ProperStrand	38	chr9	15119971	15120041	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-8.1671
chr8	117579659	117579676	protein_coding	Wwox	intron	ENSMUSG00000004637	NonProperStrand	16	chr11	106362638	106362692	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-10.0783
chr3	135268102	135268121	protein_coding	Nfkb1	exon	ENSMUSG00000028163	ProperStrand	55	chr17	13814793	13814904	protein_coding	Tcte2	intron	ENSMUSG00000038347	ProperStrand	21	8	-19.0692
chr8	125095930	125096020	protein_coding	Cdt1	exon	ENSMUSG00000006585	ProperStrand	47	chr11	69481337	69481401	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.6486
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr14	64111474	64111516	protein_coding	Tdh	utr3	ENSMUSG00000021953	ProperStrand	67	1	-7.7540
chr5	103854542	103891155	protein_coding	Ptpn13	utr5	ENSMUSG00000034573	NonProperStrand	74	chr19	8963085	8963129	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.9326
chr7	129311263	129312092	protein_coding	Plk1	exon	ENSMUSG00000030867	ProperStrand	146	chr2	180397116	180397146	protein_coding	Dido1	exon	ENSMUSG00000038914	ProperStrand	81	1	-10.9252
chr11	118268564	118268585	protein_coding	Cant1	utr3	ENSMUSG00000025575	ProperStrand	22	chr17	27649644	27649660	protein_coding	Grm4	intron	ENSMUSG00000063239	ProperStrand	147	1	-13.5480
chr4	135518127	135518143	protein_coding	Hmgcl	utr3	ENSMUSG00000028672	NonProperStrand	6	chr1	16093396	16093626	protein_coding	Rpl7	exon	ENSMUSG00000043716	ProperStrand	93	1	-17.0255
chr2	32064170	32079457	protein_coding	Prrc2b	exon	ENSMUSG00000039262	ProperStrand	344	chr19	8800356	8800457	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	25	-19.9996
chr17	51625407	51625425	LINE	L1_Mus1	L1	chr17L1_Mus151624563	ProperStrand	3	chr2	90235293	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	1	-10.7413
chr5	75473198	75473215	protein_coding	Gsx2	utr3	ENSMUSG00000035946	ProperStrand	307	chr2	167433659	167433708	protein_coding	Gm20431	utr3	ENSMUSG00000089739	ProperStrand	81	1	-9.4394
chr2	30260371	30260401	protein_coding	Crat	intron	ENSMUSG00000026853	NonProperStrand	2	chr14	33005085	33005139	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	2	-inf
chrX	149169621	149169674	protein_coding	Shroom2	intron	ENSMUSG00000045180	ProperStrand	9	chr13	76341035	76341055	protein_coding	Fam81b	intron	ENSMUSG00000078966	NonProperStrand	220	1	-14.5987
mmu-miR-6240	1	25	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr19	8963026	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	22	-0.7319
chr16	57391630	57391671	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr11	114921720	114921738	protein_coding	Cd300e	intron	ENSMUSG00000048498	NonProperStrand	1	1	-inf
chr2	127701677	127701696	protein_coding	Acoxl	intron	ENSMUSG00000027380	ProperStrand	8	chr5	111220072	111220172	protein_coding	Ulk1	exon	ENSMUSG00000029512	ProperStrand	92	1	-16.5551
chr7	133695612	133695712	protein_coding	Eif3c	exon	ENSMUSG00000030738	ProperStrand	92	chr19	38016701	38016721	protein_coding	Myof	intron	ENSMUSG00000048612	ProperStrand	37	1	-13.4313
chr12	58643588	58643606	protein_coding	Foxa1	exon	ENSMUSG00000035451	ProperStrand	25	chr2	53003875	53003891	protein_coding	Prpf40a	exon	ENSMUSG00000061136	ProperStrand	129	1	-13.5509
chr13	9833579	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr3	53257555	53257572	protein_coding	Nhlrc3	exon	ENSMUSG00000042997	ProperStrand	12	1	-8.1774
chr17	47632204	47632226	protein_coding	Taf8	intron	ENSMUSG00000023980	NonProperStrand	2	chr17	24857725	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-9.4368
chr7	117189862	117189943	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr3	95980284	95980406	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	13	-18.3642
chr14	71101555	71101572	protein_coding	Xpo7	exon	ENSMUSG00000022100	ProperStrand	109	chr16	13814062	13814128	protein_coding	Rrn3	utr3	ENSMUSG00000022682	ProperStrand	58	1	-12.1827
chr11	83107806	83107886	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	chr3	108357260	108357350	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-0.8541
chr15	102237231	102237249	protein_coding	Sp1	utr5	ENSMUSG00000001280	ProperStrand	124	chr11	120207428	120207505	protein_coding	Actg1	utr3	ENSMUSG00000062825	ProperStrand	178	2	-15.2577
chr2	26493389	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr5	121655036	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	13	-3.0463
chr1	157741832	157741869	protein_coding	Cep350	exon	ENSMUSG00000033671	ProperStrand	48	chr9	120038613	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.4442
chr8	40681587	40681603	protein_coding	Msr1	intron	ENSMUSG00000025044	ProperStrand	138	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.8548
chr15	7135160	7135258	protein_coding	Lifr	utr3	ENSMUSG00000054263	ProperStrand	64	chr16	23109048	23109090	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-7.1533
chr7	133939010	133939133	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	chr6	83318070	83318086	protein_coding	Tet3	exon	ENSMUSG00000034832	NonProperStrand	93	1	-7.4661
chr4	132753697	132753773	protein_coding	Wasf2	utr3	ENSMUSG00000028868	ProperStrand	56	chr7	31663114	31664217	protein_coding	Cd22	utr5	ENSMUSG00000030577	NonProperStrand	128	1	-11.9309
chr17	31657165	31658562	protein_coding	Ndufv3	exon	ENSMUSG00000024038	ProperStrand	9	chr19	60848743	60848823	protein_coding	Eif3a	exon	ENSMUSG00000024991	ProperStrand	287	1	-14.0639
chr2	90235312	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chrX	72214248	72214264	protein_coding-noncoding	Gab3	utr3	ENSMUSG00000032750	ProperStrand	420	1	-1.1659
chr2	4544718	4544734	protein_coding	Prpf18	utr3	ENSMUSG00000039449	NonProperStrand	66	chr6	125136670	125136703	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	1	-6.2534
chr4	117898737	117898838	protein_coding	Ptprf	exon	ENSMUSG00000033295	NonProperStrand	7	chr8	42200724	42200742	protein_coding	Mtus1	intron	ENSMUSG00000045636	ProperStrand	12	1	-21.2490
chr7	91258331	91258347	protein_coding	Fam108c	utr3	ENSMUSG00000038459	NonProperStrand	65	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	2	-8.3133
chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	chr4	55026233	55026259	protein_coding	Zfp462	exon	ENSMUSG00000060206	ProperStrand	37	1	-9.4765
chr4	43505792	43505872	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr10	80967984	80968074	protein_coding	Gna15	intron	ENSMUSG00000034792	ProperStrand	5	1	-8.0398
chr9	107947259	107947349	protein_coding	Ip6k1	intron	ENSMUSG00000032594	ProperStrand	61	chr19	8800375	8800455	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-3.4995
chr7	134014640	134014656	protein_coding	Taok2	exon	ENSMUSG00000059981	ProperStrand	47	chr2	130102034	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-5.8351
chr19	5381041	5381111	protein_coding	Sart1	exon	ENSMUSG00000039148	ProperStrand	32	chr5	108334262	108336490	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-6.1131
chr1	71644995	71645806	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr7	106628545	106628566	protein_coding	Rps3	exon	ENSMUSG00000030744	ProperStrand	159	3	-13.5875
chr9	12334863	12334883	LINE	Lx4B	L1	chr9Lx4B12334799	ProperStrand	3	chr5	45898392	45898428	protein_coding	Lap3	exon	ENSMUSG00000039682	ProperStrand	87	1	-18.9272
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr5	130295414	130295491	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	3	-8.5027
chr3	101385784	101385939	protein_coding	Atp1a1	exon	ENSMUSG00000033161	ProperStrand	316	chr11	69481332	69481422	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-1.4407
chr3	156224612	156224628	lincRNA	4930570G19Rik	exon	ENSMUSG00000085084	ProperStrand	326	chr4	154446129	154446166	protein_coding	Pex10	utr3	ENSMUSG00000029047	ProperStrand	3	1	-16.3462
chr6	38102472	38102489	protein_coding	D630045J12Rik	intron	ENSMUSG00000063455	ProperStrand	22	chr1	162965531	162965554	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.1855
chr18	66151274	66152751	protein_coding	Lman1	exon	ENSMUSG00000041891	ProperStrand	36	chr17	26360446	26360526	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	1	-11.0595
chr7	31354027	31354057	protein_coding	Wbp7	utr3	ENSMUSG00000006307	ProperStrand	180	chr7	134007244	134007303	protein_coding	Hirip3	exon	ENSMUSG00000042606	ProperStrand	28	1	-12.6511
chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	chr17	35089180	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	5	-3.5885
chr11	78037891	78038103	protein_coding	Supt6h	exon	ENSMUSG00000002052	ProperStrand	119	chr19	8798485	8798550	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-3.9042
chr14	68316770	68316816	protein_coding	Cdca2	exon	ENSMUSG00000048922	ProperStrand	50	chr1	162968457	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	3	-14.7255
chr17	35299506	35299642	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	chr10	107800722	107800852	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	3	-2.1033
chr16	37777391	37777408	protein_coding	Fstl1	exon	ENSMUSG00000022816	ProperStrand	179	chr1	162967540	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-1.6230
chr13	99361956	99362046	DNA	Charlie22a	MER1_type	chr13Charlie22a99361826	NonProperStrand	1	chr13	99362101	99362191	LTR	MLT1D	MaLR	chr13MLT1D99362117	ProperStrand	1	1	-inf
chr11	119150220	119154158	protein_coding	Eif4a3	exon	ENSMUSG00000025580	ProperStrand	14	chr18	35102297	35102354	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-9.5305
chrX	147522908	147522925	protein_coding	Fgd1	intron	ENSMUSG00000025265	ProperStrand	96	chrX	82423057	82423117	protein_coding	Dmd	exon	ENSMUSG00000045103	ProperStrand	38	1	-13.2919
chr3	34529499	34529516	non_coding	Sox2ot	.	ENSMUSG00000090828	ProperStrand	25	chr17	24665420	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-6.6672
chr1	36756891	36756937	protein_coding	Actr1b	utr3	ENSMUSG00000037351	ProperStrand	14	chr7	118219574	118219655	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-7.0429
chr9	88346850	88346950	protein_coding	Syncrip	utr3	ENSMUSG00000032423	ProperStrand	35	chr15	79908929	79908950	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-6.5364
chr9	78023109	78023150	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr17	35299508	35299608	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	6	-1.0502
chr7	52118666	52118756	protein_coding	Ptov1	utr3	ENSMUSG00000038502	ProperStrand	26	chr11	97642999	97643079	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.9888
chr9	54757857	54757901	protein_coding	Ireb2	utr3	ENSMUSG00000032293	ProperStrand	45	chr4	131908802	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-4.7431
chr7	13516168	13516187	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr9	15130830	15130897	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	1	-4.6404
chr6	125112096	125112306	protein_coding	Gapdh	exon	ENSMUSG00000057666	ProperStrand	356	chr9	15118346	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-0.7216
chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	chr5	74489575	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	6	-1.4652
chr8	73286772	73286790	protein_coding	Ifi30	utr3	ENSMUSG00000031838	ProperStrand	40	chr1	162968445	162968519	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	2	-11.1042
chr6	84876146	84876164	protein_coding	Exoc6b	intron	ENSMUSG00000033769	ProperStrand	23	chr4	116827136	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-8.9681
chr13	9833554	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr8	112363208	112363275	snoRNA	ENSMUSG00000077549_Snord71	.	ENSMUSG00000077549	ProperStrand	196	1	-2.7594
chr16	3750361	3750461	protein_coding	Zfp263	utr3	ENSMUSG00000022529	ProperStrand	17	chr2	120360599	120360667	protein_coding	Zfp106	exon	ENSMUSG00000027288	ProperStrand	199	11	-inf
chr16	93870781	93870861	protein_coding	Morc3	exon	ENSMUSG00000039456	ProperStrand	24	chr16	23110828	23110860	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.6072
chr5	130295414	130295529	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	chr8	32260335	32260433	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	24	-12.5714
chr6	120153111	120153202	protein_coding	B4galnt3	utr3	ENSMUSG00000041372	ProperStrand	36	chr7	116663648	116663728	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.4225
chr10	75998350	75999026	protein_coding	Lss	exon	ENSMUSG00000033105	ProperStrand	56	chr18	35714251	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-3.5699
chr5	115939503	115939612	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr11	97642952	97643086	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	33	-21.3054
chr17	33955113	33955129	protein_coding	Kank3	exon	ENSMUSG00000042099	ProperStrand	64	chr4	131865866	131865963	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.6688
chr5	123254542	123254632	protein_coding	Anapc5	intron	ENSMUSG00000029472	ProperStrand	92	chr3	68889144	68889221	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-2.5025
chr6	65064396	65064453	protein_coding	Smarcad1	utr3	ENSMUSG00000029920	ProperStrand	4	chr16	23110902	23110963	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.6489
chr18	75161111	75161173	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	chr12	110918158	110918221	snoRNA	ENSMUSG00000065749_AF357428	.	ENSMUSG00000065749	ProperStrand	218	2	-10.4324
chr6	88858261	88859334	protein_coding	Tpra1	exon	ENSMUSG00000002871	ProperStrand	5	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-10.3212
chr13	12510406	12510429	protein_coding	Heatr1	exon	ENSMUSG00000050244	ProperStrand	74	chr8	73419657	73419742	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.7577
chr3	89265404	89265432	protein_coding	Pmvk	intron	ENSMUSG00000027952	ProperStrand	9	chr16	23111373	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-11.4045
chr3	156224612	156224628	lincRNA	4930570G19Rik	exon	ENSMUSG00000085084	ProperStrand	326	chr15	79908965	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-2.3482
chr2	25037632	25037732	protein_coding	Nrarp	utr3	ENSMUSG00000078202	ProperStrand	2	chr2	130102060	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-12.7710
chr7	117189863	117189943	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr7	67123694	67123711	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	1	-2.6639
chr4	135447506	135447596	DNA	MER5A	MER1_type	chr4MER5A135447482	NonProperStrand	1	chr4	135447676	135447756	SINE	B3	B2	chr4B3135447698	NonProperStrand	1	1	-inf
chr4	106244841	106244869	protein_coding	Dhcr24	exon	ENSMUSG00000034926	ProperStrand	94	chr17	13112488	13112528	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-3.7322
chr8	108601033	108601133	protein_coding	Nfatc3	intron	ENSMUSG00000031902	ProperStrand	75	chr15	71624754	71624796	snoRNA	ENSMUSG00000088895_SNORA81	.	ENSMUSG00000088895	ProperStrand	348	1	-9.3435
chr5	99372453	99372470	protein_coding	Prkg2	exon	ENSMUSG00000029334	ProperStrand	22	chr11	69483212	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.2846
chr2	90235301	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr16	42144876	42144892	protein_coding	Lsamp	exon	ENSMUSG00000061080	NonProperStrand	19	1	-6.7268
chr6	122269363	122269380	protein_coding	Phc1	exon	ENSMUSG00000040669	ProperStrand	158	chr12	85350481	85350499	protein_coding	Acot1	utr5	ENSMUSG00000072949	ProperStrand	72	1	-11.0036
chr4	33622695	33622785	LTR	ORR1B1-int	MaLR	chr4ORR1B1-int33622067	ProperStrand	1	chr6	48389217	48389233	protein_coding	Zfp467	utr3	ENSMUSG00000068551	ProperStrand	16	1	-inf
chr8	63386298	63386317	protein_coding	2700029M09Rik	utr3	ENSMUSG00000038005	ProperStrand	7	chr19	8800377	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-7.8093
chr7	57041565	57041581	protein_coding	Prmt3	exon	ENSMUSG00000030505	ProperStrand	89	chr8	97948582	97958403	protein_coding	Gtl3	exon	ENSMUSG00000031796	ProperStrand	4	1	-18.4139
chr10	114734088	114734142	protein_coding	Rab21	intron	ENSMUSG00000020132	ProperStrand	8	chr11	116938705	116938751	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	4	-19.0317
chr1	13167268	13170617	protein_coding	Ncoa2	exon	ENSMUSG00000005886	ProperStrand	26	chr9	120038574	120038654	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.6046
chr7	103541884	103956872	protein_coding	Odz4	intron	ENSMUSG00000048078	ProperStrand	93	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-2.2125
chr9	20736653	20736726	protein_coding	Dnmt1	intron	ENSMUSG00000004099	ProperStrand	91	chr15	79538324	79538353	protein_coding	Gtpbp1	exon	ENSMUSG00000042535	ProperStrand	56	3	-19.7411
chr6	49200911	49200927	protein_coding	Tra2a	exon	ENSMUSG00000029817	ProperStrand	54	chr1	162967489	162967564	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-3.6691
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr13	34436854	34436870	protein_coding	Slc22a23	utr5	ENSMUSG00000038267	ProperStrand	95	1	-3.5991
chr4	3762671	3762740	protein_coding	Rps20	utr5	ENSMUSG00000028234	ProperStrand	71	chr9	15119956	15120056	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	1	-9.3693
chr7	31255902	31255921	protein_coding	Nphs1	exon	ENSMUSG00000006649	ProperStrand	22	chrX	70703396	70703412	protein_coding	Haus7	exon	ENSMUSG00000031371	NonProperStrand	18	1	-17.5968
chr2	126576905	126578072	protein_coding	Usp8	exon	ENSMUSG00000027363	ProperStrand	40	chr1	162968447	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-6.8830
mmu-miR-1949	8	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr16	55967253	55969692	protein_coding	Rpl24	exon	ENSMUSG00000022601	ProperStrand	149	1	-6.3437
chr14	45903565	45903621	protein_coding	Ero1l	utr3	ENSMUSG00000021831	ProperStrand	18	chr4	131908236	131908297	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-5.9403
chr7	128195743	128200746	protein_coding	Mettl9	exon	ENSMUSG00000030876	ProperStrand	20	chr4	131908265	131908355	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	5	-14.5543
chr5	110747277	110747333	protein_coding	Pole	exon	ENSMUSG00000007080	ProperStrand	125	chr6	135260264	135260280	protein_coding	Pbp2	exon	ENSMUSG00000047104	NonProperStrand	1	1	-inf
chr11	98878365	98878468	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	chr15	79908931	79909022	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	9	-6.2641
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr2	79843543	79843563	protein_coding	Pde1a	intron	ENSMUSG00000059173	NonProperStrand	275	1	-4.7527
chr9	106383038	106383071	protein_coding	Rrp9	exon	ENSMUSG00000041506	ProperStrand	32	chr13	76341035	76341055	protein_coding	Fam81b	intron	ENSMUSG00000078966	NonProperStrand	220	1	-11.9781
chr19	23210162	23210211	lincRNA	2410080I02Rik	exon	ENSMUSG00000044387	NonProperStrand	3	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-13.5890
chr4	128867196	128867212	protein_coding	Yars	exon	ENSMUSG00000028811	ProperStrand	131	chr7	117189863	117189895	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-4.6895
chr5	135101438	135101454	protein_coding	Eif4h	exon	ENSMUSG00000040731	ProperStrand	46	chr14	76247720	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-4.6797
chr3	8930989	8931031	protein_coding	Tpd52	utr3	ENSMUSG00000027506	ProperStrand	37	chr9	15118324	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-4.3749
chr2	130974006	130974096	protein_coding-noncoding	1700037H04Rik	utr3	ENSMUSG00000027327	ProperStrand	1	chr2	166890502	166890582	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-inf
chr4	57727889	57727906	protein_coding	Gm20459	intron	ENSMUSG00000089945	NonProperStrand	34	chr11	106362638	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-8.5432
chr3	54383516	54383596	LTR	ORR1C1	MaLR	chr3ORR1C154383296	NonProperStrand	1	chr3	54383810	54383900	SINE	B4A	B4	chr3B4A54383753	NonProperStrand	1	1	-inf
chr17	35288745	35288808	protein_coding	Prrc2a	intron	ENSMUSG00000024393	ProperStrand	315	chr15	98350193	98350283	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	2	-3.2982
chr5	92630161	92630241	protein_coding	Uso1	exon	ENSMUSG00000029407	ProperStrand	17	chr16	23111708	23111798	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.1536
chr12	68766442	68766532	LINE	L1_Mus2	L1	chr12L1_Mus268766146	NonProperStrand	2	chr16	98284269	98284359	LINE	L1_Mus1	L1	chr16L1_Mus198283327	NonProperStrand	3	1	-inf
chr13	36818569	36818585	protein_coding	Nrn1	exon	ENSMUSG00000039114	NonProperStrand	1	chr9	15119645	15119767	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	NonProperStrand	21	1	-inf
chr17	88382900	88383799	protein_coding	Msh6	exon	ENSMUSG00000005370	ProperStrand	150	chr4	131908810	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-1.2530
chr2	90235292	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr16	19883898	19884020	protein_coding	A930003A15Rik	exon	ENSMUSG00000075330	ProperStrand	93	1	-3.6383
chr1	194571810	194571880	snRNA	ENSMUSG00000064881_U5	.	ENSMUSG00000064881	ProperStrand	187	chr16	23111384	23111474	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-0.8763
chr15	93271981	93272022	protein_coding	Pphln1	exon	ENSMUSG00000036167	ProperStrand	20	chr17	13112504	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	3	-15.4606
chr5	100855902	100855973	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr4	141034387	141034463	protein_coding	Spen	exon	ENSMUSG00000040761	ProperStrand	161	1	-4.7116
chr2	130109497	130109513	protein_coding	Idh3b	exon	ENSMUSG00000027406	ProperStrand	146	chr7	114354178	114354211	protein_coding	Rbmxl2	utr3	ENSMUSG00000073894	ProperStrand	23	1	-13.4693
chr5	124573599	124573618	protein_coding	Pitpnm2	exon	ENSMUSG00000029406	NonProperStrand	15	chr16	23110455	23110497	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.0488
chr2	162898399	162898502	protein_coding	Mybl2	exon	ENSMUSG00000017861	ProperStrand	230	chr2	26493366	26493485	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	4	-6.0492
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr4	149990961	149991013	protein_coding	Rere	exon	ENSMUSG00000039852	ProperStrand	76	1	-5.4407
chr11	105913247	105916503	protein_coding	Dcaf7	exon	ENSMUSG00000049354	ProperStrand	30	chr4	131908689	131908788	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-4.1042
chr14	20451772	20451789	LTR	IAPLTR3-int	ERVK	chr14IAPLTR3-int20447903	ProperStrand	44	chr4	34523603	34523664	protein_coding	Orc3	exon	ENSMUSG00000040044	ProperStrand	10	1	-17.6964
chr11	62416575	62416656	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	chr10	23505559	23505627	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	9	-10.0156
chr5	103952637	103952654	protein_coding	Ptpn13	exon	ENSMUSG00000034573	ProperStrand	23	chr16	23110828	23110860	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.4133
chr4	138958512	139021380	protein_coding	Ubr4	exon	ENSMUSG00000066036	ProperStrand	304	chr16	23111748	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	5	-1.9974
chr14	56163338	56163730	protein_coding	Pck2	exon	ENSMUSG00000040618	ProperStrand	18	chr7	117189922	117190002	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-5.6444
chr12	110881082	110888946	lincRNA	Rian	intron	ENSMUSG00000091793	ProperStrand	612	chr9	15119631	15119766	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	14	-9.6246
chr7	147130109	147130181	protein_coding	Utf1	exon	ENSMUSG00000047751	ProperStrand	67	chr7	117190023	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	3	-7.9432
chr15	36538382	36538464	protein_coding	Pabpc1	utr5	ENSMUSG00000022283	ProperStrand	908	chr15	34372810	34372953	protein_coding	Rpl30	utr5	ENSMUSG00000058600	ProperStrand	65	6	-inf
chr16	11144151	11144251	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr11	69483136	69483214	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	NonProperStrand	35	1	-11.5482
chr15	80081790	80081817	protein_coding	Smcr7l	utr3	ENSMUSG00000022412	ProperStrand	19	chr7	116664872	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-4.6802
chr17	33787182	33787217	protein_coding	Hnrnpm	exon	ENSMUSG00000059208	ProperStrand	56	chr10	12978374	12978393	protein_coding	Phactr2	intron	ENSMUSG00000062866	ProperStrand	8	1	-17.4684
chr11	116535488	116535534	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr10	80582263	80582317	protein_coding	Map2k2	exon	ENSMUSG00000035027	ProperStrand	26	2	-12.1694
chr12	101444933	101444975	protein_coding	Calm1	utr3	ENSMUSG00000001175	ProperStrand	23	chr5	130300482	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.2653
chr13	104814125	104814150	protein_coding	Nln	utr3	ENSMUSG00000021710	ProperStrand	47	chr3	123210913	123210939	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.4742
chr11	16908628	16908644	protein_coding	Plek	utr5	ENSMUSG00000020120	NonProperStrand	5	chr5	130295414	130295451	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-10.3593
chr1	88426125	88426356	protein_coding	Ptma	exon	ENSMUSG00000026238	ProperStrand	385	chr13	8766355	8766387	protein_coding	Adarb2	utr3	ENSMUSG00000052551	NonProperStrand	61	2	-15.1110
chr6	35177461	35177496	protein_coding	Nup205	exon	ENSMUSG00000038759	ProperStrand	56	chr11	68886927	68887033	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-4.2747
chr15	31751903	31751919	DNA	Charlie4a	MER1_type	chr15Charlie4a31751626	NonProperStrand	2	chr5	121655016	121655096	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-inf
chr16	72800514	72800532	protein_coding	Robo1	intron	ENSMUSG00000022883	NonProperStrand	188	chr12	106269341	106269445	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-2.1079
chr4	94725996	94726096	antisense	BC042782	.	ENSMUSG00000087366	ProperStrand	6	chr2	26768068	26768104	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	1	-13.1477
chr16	36880915	36880931	protein_coding	Golgb1	intron	ENSMUSG00000034243	ProperStrand	92	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-6.8894
chr10	120156949	120156967	SINE	MIR	MIR	chr10MIR120156856	ProperStrand	2	chr8	32260368	32260423	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	2	-inf
chr11	42440243	42440259	protein_coding	Gabrb2	exon	ENSMUSG00000007653	ProperStrand	248	chr6	71832629	71832682	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-2.9419
chr16	57391760	57391792	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr8	125741087	125741105	protein_coding	4732415M23Rik	intron	ENSMUSG00000048478	ProperStrand	88	1	-7.0308
chr2	90235313	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr16	34055166	34116351	protein_coding	Kalrn	exon	ENSMUSG00000061751	ProperStrand	135	3	-7.5588
chr1	75528981	75529034	protein_coding	Stk11ip	exon	ENSMUSG00000026213	ProperStrand	8	chr3	123210854	123210912	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-14.0955
chr10	128114532	128114626	protein_coding	Rab5b	utr3	ENSMUSG00000000711	ProperStrand	14	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	2	-18.2351
chr17	24857302	24858199	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr7	117189959	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	3	-2.1632
chr15	81208401	81213444	protein_coding	St13	exon	ENSMUSG00000022403	ProperStrand	59	chr16	23111468	23111499	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.2821
chr10	79325567	79325891	protein_coding	Ptbp1	exon	ENSMUSG00000006498	ProperStrand	129	chr7	117190017	117190063	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-3.6290
chr12	33532229	33532297	protein_coding	Nampt	intron	ENSMUSG00000020572	ProperStrand	15	chr9	64024531	64024567	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	1	-11.1792
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr4	140121137	140121153	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	1	-5.3166
chr9	15119647	15119712	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	chr4	41150097	41150125	snoRNA	ENSMUSG00000089265_SNORD121A	.	ENSMUSG00000089265	ProperStrand	370	3	-1.2408
chr7	106630296	106631080	protein_coding	Rps3	exon	ENSMUSG00000030744	ProperStrand	159	chr4	131866220	131866273	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-1.9671
chr11	78313939	78313956	protein_coding	Vtn	exon	ENSMUSG00000017344	ProperStrand	188	chr15	36538461	36538530	protein_coding	Pabpc1	utr5	ENSMUSG00000022283	ProperStrand	908	1	-5.6266
chr8	73115775	73115791	protein_coding	Ell	utr3	ENSMUSG00000070002	NonProperStrand	134	chr5	121655032	121655080	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.3195
chrX	7351826	7351916	protein_coding	Tfe3	utr3	ENSMUSG00000000134	ProperStrand	10	chr19	8800386	8800466	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-7.0560
chr8	3803234	3803343	misc_RNA	RNaseP_nuc	.	ENSMUSG00000088025	ProperStrand	328	chr14	51427115	51427380	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	195	-20.6562
chr11	87240289	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	chr8	73419657	73419717	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-1.2572
chr13	9833553	9833653	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr2	69193623	69193669	LINE	L1Md_F2	L1	chr2L1Md_F269191897	ProperStrand	54	3	-12.1260
chr1	84738768	84738901	protein_coding	Trip12	exon	ENSMUSG00000026219	ProperStrand	248	chr3	30951404	30951422	protein_coding	Prkci	utr3	ENSMUSG00000037643	ProperStrand	39	1	-11.3366
chr12	110881049	110888955	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr4	131908688	131908797	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	12	-1.1623
chr13	113723320	113723380	protein_coding	Dhx29	exon	ENSMUSG00000042426	ProperStrand	15	chr18	35714145	35714235	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	3	-14.3148
chr16	17858652	17859500	protein_coding	Dgcr2	exon	ENSMUSG00000003166	ProperStrand	45	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-4.9855
chr17	92080246	92080272	LTR	ETnERV-int	ERVK	chr17ETnERV-int92080068	ProperStrand	1	chr14	26563177	26563285	protein_coding	Zcchc24	intron	ENSMUSG00000055538	ProperStrand	42	1	-inf
chr1	72909310	72909328	protein_coding	Igfbp5	intron	ENSMUSG00000026185	ProperStrand	5	chr4	131908357	131908410	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-6.0411
chr5	100855902	100855965	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr4	122968617	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	3	-2.2362
chr18	34380679	34380779	protein_coding	Apc	utr5	ENSMUSG00000005871	ProperStrand	64	chr10	23505215	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.1465
chr10	43674714	43674786	protein_coding	Aim1	intron	ENSMUSG00000019866	NonProperStrand	16	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	5	-21.6079
chr19	29687463	29687553	protein_coding-noncoding	Ermp1	utr3	ENSMUSG00000046324	NonProperStrand	1	chr19	29687215	29687295	protein_coding	Ermp1	intron	ENSMUSG00000046324	NonProperStrand	7	1	-inf
chr5	121748159	121749524	protein_coding	Gm15800	exon	ENSMUSG00000042744	ProperStrand	47	chr6	30087308	30087333	protein_coding	Nrf1	intron	ENSMUSG00000058440	ProperStrand	22	3	-inf
chr12	86136022	86136038	protein_coding	Ltbp2	exon	ENSMUSG00000002020	ProperStrand	14	chr16	23110940	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.2008
chr7	147130311	147130411	protein_coding	Utf1	intron	ENSMUSG00000047751	ProperStrand	67	chr19	8799859	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-4.7340
chr13	52742450	52742466	protein_coding	Syk	utr3	ENSMUSG00000021457	NonProperStrand	125	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-7.1304
chr5	20934127	20934217	protein_coding	Fam185a	intron	ENSMUSG00000047221	ProperStrand	3	chr18	35716793	35716873	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-8.1910
chr1	120538120	120538158	protein_coding	Tfcp2l1	intron	ENSMUSG00000026380	ProperStrand	158	chr5	130300500	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.0399
chr5	77285929	77285951	protein_coding	C530008M17Rik	exon	ENSMUSG00000036377	ProperStrand	9	chr9	15119968	15120011	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-11.1264
chr2	158185576	158185654	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr2	130101257	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	8	-9.7911
chrX	91435668	91435740	protein_coding	Eif2s3x	utr3	ENSMUSG00000035150	ProperStrand	55	chr9	58553324	58553341	protein_coding	2410076I21Rik	intron	ENSMUSG00000074269	NonProperStrand	10	1	-17.0520
chr2	92440278	92440296	protein_coding	Chst1	utr5	ENSMUSG00000027221	ProperStrand	17	chr11	5180669	5180685	protein_coding	Znrf3	utr3	ENSMUSG00000041961	NonProperStrand	210	1	-13.3652
chr13	112226776	112278570	protein_coding	Gpbp1	exon	ENSMUSG00000032745	ProperStrand	85	chr4	131908409	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-1.9037
chr18	12172461	12172477	protein_coding	6030446N20Rik	intron	ENSMUSG00000049411	ProperStrand	235	chr8	129468750	129468799	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-1.9816
chr1	162967518	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	chr2	166890502	166890556	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	5	-1.0107
chr9	20722593	20722611	protein_coding	Dnmt1	exon	ENSMUSG00000004099	ProperStrand	91	chr14	33005066	33005166	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-3.2246
chr4	56808528	56808566	protein_coding	Ikbkap	intron	ENSMUSG00000028431	ProperStrand	44	chr10	88876115	88876147	protein_coding	Gas2l3	exon	ENSMUSG00000074802	ProperStrand	16	2	-inf
chr5	125997258	125997323	protein_coding	Aacs	utr3	ENSMUSG00000029482	ProperStrand	12	chr9	15119305	15119425	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	4	-inf
chr7	108440949	108440968	protein_coding	Atg16l2	intron	ENSMUSG00000047767	ProperStrand	121	chr5	115939532	115939612	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	9	-18.7347
chr1	54420057	54420077	protein_coding	Ccdc150	intron	ENSMUSG00000025983	ProperStrand	56	chr19	8963118	8963183	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.3909
chr18	64112332	64112349	protein_coding	Wdr7	intron	ENSMUSG00000040560	NonProperStrand	180	chr11	6519859	6519928	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-5.7701
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	142940005	142940026	protein_coding	Lrrc38	utr5	ENSMUSG00000028584	ProperStrand	9	1	-8.2671
chr8	18948680	18948711	protein_coding	Xkr5	utr5	ENSMUSG00000039814	ProperStrand	6	chr3	108357351	108357451	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-9.2183
chr9	44196946	44200208	protein_coding	Hyou1	utr3	ENSMUSG00000032115	ProperStrand	145	chr7	148634746	148634836	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	4	-8.7063
chrX	84483707	84483745	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-2.8763
chr11	75578663	75578884	protein_coding	Ywhae	utr3	ENSMUSG00000020849	ProperStrand	176	chr3	123210854	123210979	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	18	-inf
chr7	151765212	151765228	antisense	Gm10574	.	ENSMUSG00000073778	ProperStrand	357	chr2	130101988	130102053	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-2.0998
chr1	88247817	88247874	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	chr11	69482357	69482406	snoRNA	ENSMUSG00000089542_snoU6-77	.	ENSMUSG00000089542	ProperStrand	138	1	-3.5203
chr9	21490550	21490590	protein_coding	Smarca4	exon	ENSMUSG00000032187	ProperStrand	196	chr11	51390402	51390587	protein_coding	Col23a1	exon	ENSMUSG00000063564	ProperStrand	16	1	-13.6305
chr17	32340416	32340516	protein_coding	Brd4	intron	ENSMUSG00000024002	ProperStrand	121	chr9	120038613	120038672	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.8539
chr5	133950945	133950973	pseudogene	Gm10051	.	ENSMUSG00000058905	ProperStrand	1	chr4	56910494	56910600	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-inf
chr4	30203882	30203972	LINE	Lx9	L1	chr4Lx930203663	NonProperStrand	1	chr4	30204352	30204432	LTR	RMER13A	ERVK	chr4RMER13A30204043	ProperStrand	1	1	-inf
chr5	130113534	130113630	protein_coding	Mmp17	utr3	ENSMUSG00000029436	ProperStrand	17	chr4	131908687	131908739	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.3002
chr11	94271188	94272358	protein_coding	Cacna1g	exon	ENSMUSG00000020866	NonProperStrand	5	chr3	88715214	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-12.3847
chr2	48760556	48760572	protein_coding	Orc4	utr3	ENSMUSG00000026761	ProperStrand	95	chr11	97643003	97643060	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.7248
chr6	125115313	125115583	protein_coding	Gapdh	utr5	ENSMUSG00000057666	ProperStrand	356	chr14	76247736	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-2.2774
chr19	7502163	7502189	protein_coding	Rtn3	utr3	ENSMUSG00000024758	ProperStrand	35	chr11	69481387	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	6	-20.1914
chr1	177555608	177555698	protein_coding	Fh1	exon	ENSMUSG00000026526	ProperStrand	37	chr9	59516449	59516467	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	3	-18.3121
chr4	131865855	131865948	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr13	22011146	22011168	tRNA	tRNA86-SerAGA	.	86385	ProperStrand	33	3	-7.2281
chr9	61916211	61916249	protein_coding	Glce	exon	ENSMUSG00000032252	ProperStrand	15	chr7	117190023	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	3	-14.0690
chr7	31741186	31741215	protein_coding	Usf2	exon	ENSMUSG00000058239	ProperStrand	8	chr3	68889316	68889346	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-7.2271
chr14	21384023	21384041	antisense	1810062O18Rik	.	ENSMUSG00000084925	ProperStrand	4	chr4	131865866	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.0048
chr13	22098354	22098371	protein_coding	Prss16	intron	ENSMUSG00000006179	ProperStrand	78	chr11	55296276	55296310	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-5.6645
chr2	152238207	152238307	protein_coding	Zcchc3	utr3	ENSMUSG00000074682	ProperStrand	11	chr17	13112528	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-7.9692
chr12	39229089	39229108	protein_coding	Dgkb	intron	ENSMUSG00000036095	ProperStrand	19	chr1	162966221	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	2	-15.7026
chr11	62416526	62418032	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr5	130300436	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	6	-2.0865
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr17	23955984	23956245	protein_coding	Srrm2	utr3	ENSMUSG00000039218	ProperStrand	521	4	-8.4825
chr16	4886395	4886411	protein_coding	Mgrn1	exon	ENSMUSG00000022517	NonProperStrand	157	chr8	11217448	11217510	protein_coding	Col4a1	exon	ENSMUSG00000031502	ProperStrand	64	1	-11.2531
chr13	56178961	56178979	protein_coding	H2afy	intron	ENSMUSG00000015937	NonProperStrand	9	chr14	20587842	20587860	protein_coding	Nid2	exon	ENSMUSG00000021806	ProperStrand	372	1	-13.5453
chr11	116475610	116475705	protein_coding	Rhbdf2	intron	ENSMUSG00000020806	ProperStrand	20	chr4	33108979	33109007	protein_coding	Rragd	utr3	ENSMUSG00000028278	ProperStrand	14	1	-19.5947
chr8	125626831	125627098	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	chr10	107800720	107800810	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	3	-12.5828
chr3	105265054	105265072	protein_coding	Kcnd3	intron	ENSMUSG00000040896	NonProperStrand	44	chr11	120209326	120209382	protein_coding	Actg1	exon	ENSMUSG00000062825	ProperStrand	178	1	-11.7572
chr16	23110886	23110906	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	chr18	35100921	35100956	snoRNA	ENSMUSG00000089239_SNORD63	.	ENSMUSG00000089239	ProperStrand	18	1	-1.7867
chr15	103359546	103359572	protein_coding	Pde1b	utr3	ENSMUSG00000022489	ProperStrand	19	chr3	93250306	93250322	protein_coding	Tchh	exon	ENSMUSG00000052415	ProperStrand	26	1	-17.2880
chr5	66651465	66651481	protein_coding	Nsun7	utr5	ENSMUSG00000029206	NonProperStrand	73	chr14	76247711	76247762	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-3.8035
chr5	74489216	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr9	70960076	70960093	protein_coding	Aqp9	exon	ENSMUSG00000032204	NonProperStrand	118	3	-10.3696
chr11	62416578	62416595	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr17	24856620	24856670	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-2.3687
chr9	44196391	44196436	protein_coding	Hyou1	exon	ENSMUSG00000032115	ProperStrand	145	chr2	26494763	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	5	-8.6036
chr14	7858475	7858492	protein_coding	Gm10406	intron	ENSMUSG00000072735	NonProperStrand	4	chr19	8963087	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-7.6308
chr16	66813979	66813996	protein_coding	Cadm2	intron	ENSMUSG00000064115	ProperStrand	9	chr19	8963051	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-14.0209
chr6	90412639	90412705	protein_coding	Klf15	utr5	ENSMUSG00000030087	ProperStrand	9	chr19	59534008	59534026	protein_coding	Emx2	exon	ENSMUSG00000043969	NonProperStrand	87	1	-16.4041
chr13	46862888	46862944	snoRNA	ENSMUSG00000064558_SNORA55	.	ENSMUSG00000064558	ProperStrand	187	chr16	23110455	23110517	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-0.8039
chr15	102313637	102314602	protein_coding	Pcbp2	exon	ENSMUSG00000056851	ProperStrand	164	chr2	26768370	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	2	-6.2240
chr7	28385112	28385132	protein_coding	Akt2	intron	ENSMUSG00000004056	NonProperStrand	1	chr5	130293325	130293375	protein_coding	Cct6a	exon	ENSMUSG00000029447	ProperStrand	128	1	-inf
chr17	35972402	35972430	protein_coding	Tubb5	exon	ENSMUSG00000001525	ProperStrand	624	chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	1	-5.6296
chr15	79207576	79208903	protein_coding	Tmem184b	exon	ENSMUSG00000009035	ProperStrand	37	chr10	110918549	110918633	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	3	-10.5247
chr4	125816555	125816624	protein_coding	Stk40	utr3	ENSMUSG00000042608	ProperStrand	32	chr4	131908356	131908397	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.4145
chr9	78023109	78023148	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr13	104554009	104559415	protein_coding	Srek1	utr5	ENSMUSG00000032621	ProperStrand	41	1	-6.6310
chr16	3856858	3856877	protein_coding	Zfp174	utr3	ENSMUSG00000054939	NonProperStrand	166	chr4	131865512	131865941	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.0809
chr2	164521970	164521987	SINE	B4A	B4	chr2B4A164521909	ProperStrand	41	chr5	117807408	117813620	protein_coding	Wsb2	utr5	ENSMUSG00000029364	ProperStrand	15	1	-16.9936
chr13	98265283	98265346	lincRNA	Gm11019	exon	ENSMUSG00000078952	ProperStrand	113	chr2	145077954	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-6.4671
chr11	72582416	72582439	protein_coding	Ankfy1	utr3	ENSMUSG00000020790	ProperStrand	68	chr9	120038610	120038675	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.8168
chr17	56574376	56574397	protein_coding	Ptprs	exon	ENSMUSG00000013236	ProperStrand	152	chr9	15119324	15119426	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-3.3551
chr19	3904233	3904250	protein_coding	Tcirg1	exon	ENSMUSG00000001750	ProperStrand	77	chrX	103389830	103390021	protein_coding	Pgk1	exon	ENSMUSG00000062070	ProperStrand	484	1	-8.6337
chr3	95651517	95652842	protein_coding	Prpf3	exon	ENSMUSG00000015748	ProperStrand	29	chr18	35714159	35714239	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.8207
chr17	32973983	32974024	LINE	Lx7	L1	chr17Lx732973853	ProperStrand	2	chr2	22444476	22444536	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	2	-inf
chr19	10116351	10116367	protein_coding	Fads3	exon	ENSMUSG00000024664	NonProperStrand	16	chr2	145077955	145209255	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-10.4000
chr14	65695180	65695196	protein_coding	Extl3	exon	ENSMUSG00000021978	ProperStrand	36	chr7	29678706	29678844	protein_coding	Actn4	utr3	ENSMUSG00000054808	ProperStrand	120	1	-12.9543
chr1	74350731	74350749	protein_coding	Pnkd	intron	ENSMUSG00000026179	ProperStrand	22	chr9	78327840	78327890	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-8.3448
chr7	120019728	120019745	protein_coding	Tead1	exon	ENSMUSG00000055320	NonProperStrand	41	chr7	117189863	117189885	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-6.9650
chr15	79502342	79502401	protein_coding	Tomm22	exon	ENSMUSG00000022427	ProperStrand	7	chr2	91210756	91210773	protein_coding	1110051M20Rik	intron	ENSMUSG00000040591	NonProperStrand	11	1	-20.7588
chr7	106627900	106627965	protein_coding	Rps3	exon	ENSMUSG00000030744	ProperStrand	159	chr5	108336378	108336468	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	8	-20.6379
chr7	127022330	127022423	protein_coding	Dcun1d3	intron	ENSMUSG00000048787	ProperStrand	11	chr11	77995189	77995255	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	3	-21.0870
chr17	66173214	66173314	protein_coding	Ppp4r1	intron	ENSMUSG00000061950	ProperStrand	46	chr16	23111753	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.3385
chr8	89366464	89366562	protein_coding	N4bp1	utr3	ENSMUSG00000031652	ProperStrand	98	chr9	120039661	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.4529
chr17	35254718	35254803	protein_coding	Csnk2b	exon	ENSMUSG00000024387	ProperStrand	13	chr16	23110522	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.3353
chr3	87689434	87689492	protein_coding	Prcc	utr5	ENSMUSG00000004895	ProperStrand	38	chr1	162965980	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	4	-14.2898
chr16	75756810	75756904	protein_coding	Hspa13	utr3	ENSMUSG00000032932	ProperStrand	7	chr2	26768379	26768433	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-9.9835
chr9	64981511	64981529	protein_coding	Igdcc4	exon	ENSMUSG00000032816	NonProperStrand	36	chr1	88247814	88247863	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-6.0993
chr2	23046642	23048006	protein_coding	Yme1l1	exon	ENSMUSG00000026775	ProperStrand	20	chr9	15118245	15118321	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-9.1745
chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-2.6505
chr2	113688306	113688402	protein_coding	Arhgap11a	utr5	ENSMUSG00000041219	ProperStrand	47	chr9	15119722	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.0610
chr3	10411973	10412063	LINE	Lx5	L1	chr3Lx510411630	ProperStrand	1	chr14	56220506	56220582	protein_coding	Rnf31	exon	ENSMUSG00000047098	ProperStrand	17	1	-inf
chr14	56368228	56368244	protein_coding	2610027L16Rik	exon	ENSMUSG00000019297	NonProperStrand	2	chr11	6428108	6428157	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-10.4671
chr5	147022639	147022729	protein_coding	Rnf6	exon	ENSMUSG00000029634	ProperStrand	6	chr5	130300470	130300550	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-7.0019
chr9	108467058	108467222	protein_coding	Impdh2	exon	ENSMUSG00000062867	ProperStrand	74	chr11	55296195	55296258	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	8	-inf
chr16	33625246	33646649	protein_coding	Slc12a8	exon	ENSMUSG00000035506	ProperStrand	52	chr3	123210854	123210987	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-4.1057
chr7	52382023	52382082	protein_coding-noncoding	Rpl13a	utr3	ENSMUSG00000074129	ProperStrand	106	chr7	52381973	52382012	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	2	-9.1330
chr15	98796458	98796538	LINE	Lx7	L1	chr15Lx798796450	ProperStrand	1	chr15	98796129	98796219	LTR	RLTR14	ERV1	chr15RLTR1498796139	ProperStrand	1	1	-inf
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr11	80965641	80965658	protein_coding	Accn1	exon	ENSMUSG00000020704	NonProperStrand	228	1	-3.3615
chr1	45448521	45448537	protein_coding	Col5a2	exon	ENSMUSG00000026042	ProperStrand	184	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-6.3673
chr17	65472482	65472501	LINE	Lx5	L1	chr17Lx565472374	NonProperStrand	1	chr6	28481411	28481473	protein_coding	Snd1	exon	ENSMUSG00000001424	ProperStrand	210	1	-inf
chr4	131908253	131908346	lincRNA	Gm17300	exon	ENSMUSG00000091021	ProperStrand	109	chr16	8705045	8705204	protein_coding	Usp7	exon	ENSMUSG00000022710	NonProperStrand	11	1	-15.5646
chr12	25742134	25742219	protein_coding	Kidins220	exon	ENSMUSG00000036333	ProperStrand	26	chr7	148634716	148634806	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-5.6034
chr16	4094206	4094257	protein_coding	Crebbp	exon	ENSMUSG00000022521	ProperStrand	56	chr3	68889026	68889126	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-3.3826
chr3	146092216	146092233	protein_coding	Ssx2ip	intron	ENSMUSG00000036825	ProperStrand	19	chr7	117189932	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-5.5364
chr16	8690506	8693145	protein_coding	Usp7	utr3	ENSMUSG00000022710	ProperStrand	118	chr16	23111374	23111478	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-2.8533
chr1	95936068	95936084	protein_coding	Pdcd1	exon	ENSMUSG00000026285	ProperStrand	12	chr9	107953073	107953194	protein_coding	Gmppb	exon	ENSMUSG00000070284	ProperStrand	1	1	-inf
chr19	9022554	9022601	protein_coding	Mta2	exon	ENSMUSG00000071646	ProperStrand	70	chr15	4962082	4962098	protein_coding	C7	utr3	ENSMUSG00000079105	ProperStrand	63	1	-12.9069
chr6	91438214	91438273	protein_coding	Tmem43	utr3	ENSMUSG00000030095	ProperStrand	14	chr16	23111372	23111429	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.7143
chr8	26879777	26879793	protein_coding	Gm17484	utr3	ENSMUSG00000091514	ProperStrand	68	chr7	29136525	29136575	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.1563
chr11	68886963	68887065	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	chr13	49779667	49779805	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	8	-3.2390
chr2	152144922	152145022	protein_coding	Rbck1	exon	ENSMUSG00000027466	ProperStrand	30	chr18	33954928	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-4.8204
chr11	60371031	60371096	protein_coding	Alkbh5	utr3	ENSMUSG00000042650	ProperStrand	203	chr18	35714145	35714235	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	3	-4.1715
chr7	147035753	147035770	protein_coding	Gpr123	intron	ENSMUSG00000025475	ProperStrand	3	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-11.5227
chr13	104902156	104902176	protein_coding	Sgtb	intron	ENSMUSG00000042743	ProperStrand	60	chr11	62416951	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-6.0431
chr2	10156793	10160200	protein_coding	Itih5	exon	ENSMUSG00000025780	ProperStrand	15	chr11	6428099	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.8593
chr7	80600476	80644950	protein_coding	Chd2	exon	ENSMUSG00000078671	ProperStrand	69	chr16	23111690	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-4.8224
chr5	110819052	110819126	protein_coding	Fbrsl1	intron	ENSMUSG00000043323	ProperStrand	131	chr4	131866155	131866245	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-2.2829
chr15	76425578	76425666	protein_coding	Adck5	exon	ENSMUSG00000022550	ProperStrand	3	chr17	81344133	81344150	protein_coding	Tmem178	exon	ENSMUSG00000024245	ProperStrand	67	1	-19.0826
chr15	79075770	79076411	protein_coding	Pick1	exon	ENSMUSG00000068206	NonProperStrand	4	chr2	158185531	158185649	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	2	-18.7558
chr8	108454500	108454563	protein_coding	Pskh1	utr3	ENSMUSG00000048310	ProperStrand	13	chr4	131865891	131865981	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.5141
chr9	53328253	53330193	protein_coding	Atm	exon	ENSMUSG00000034218	ProperStrand	17	chr5	130300477	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.8548
chr1	88247748	88247848	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	chr8	113366285	113366350	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	1	-1.4606
chr4	131908356	131908460	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr9	57809132	57809149	protein_coding	Sema7a	exon	ENSMUSG00000038264	ProperStrand	43	1	-7.9252
chr15	79911363	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr1	9932550	9932625	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	8	-3.5892
chr8	109181717	109181778	protein_coding	Cdh1	exon	ENSMUSG00000000303	ProperStrand	283	chr3	108357255	108357293	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-1.7940
chr4	129194660	129194735	protein_coding	Hdac1	exon	ENSMUSG00000028800	ProperStrand	49	chr4	138932244	138932269	protein_coding	C230096C10Rik	utr3	ENSMUSG00000078517	ProperStrand	69	3	-inf
chr9	78023110	78023163	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr6	67221890	67221924	protein_coding	Serbp1	exon	ENSMUSG00000036371	ProperStrand	261	1	-3.0943
chr17	68102279	68103120	protein_coding	Lama1	exon	ENSMUSG00000032796	ProperStrand	168	chr2	26494740	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.4185
chr14	33153227	33153832	protein_coding	Ogdhl	exon	ENSMUSG00000021913	ProperStrand	182	chr13	49134510	49134568	protein_coding	Wnk2	exon	ENSMUSG00000037989	ProperStrand	20	1	-13.3149
chr11	4793170	4793215	protein_coding	Nipsnap1	utr3	ENSMUSG00000034285	ProperStrand	15	chr2	144087324	144087364	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-9.3428
chr17	23957886	23957919	protein_coding	Srrm2	utr3	ENSMUSG00000039218	ProperStrand	521	chr12	110892838	110892906	snoRNA	ENSMUSG00000064621_AF357355	.	ENSMUSG00000064621	ProperStrand	60	1	-8.9869
chr7	34987306	34987384	protein_coding	Gpi1	utr3	ENSMUSG00000036427	ProperStrand	288	chr4	131866240	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	3	-3.4366
chr17	47736232	47736277	protein_coding	Ccnd3	utr3	ENSMUSG00000034165	ProperStrand	58	chr4	131866241	131866287	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-6.3113
chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	chr2	26494708	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	5	-2.1896
chr8	74135219	74135309	protein_coding	Glt25d1	exon	ENSMUSG00000034807	ProperStrand	36	chr7	29136521	29136601	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.2650
chr14	35224508	35224563	protein_coding	Bmpr1a	utr3	ENSMUSG00000021796	ProperStrand	21	chr4	131908327	131908417	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-5.4868
chr15	98356691	98356791	protein_coding	2310037I24Rik	intron	ENSMUSG00000022992	ProperStrand	91	chr15	79913288	79913346	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-4.9332
chr12	88222400	88222500	protein_coding	6430527G18Rik	utr3	ENSMUSG00000034168	ProperStrand	46	chr11	77995191	77995242	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-6.7090
chr1	91376032	91376075	protein_coding	Agap1	intron	ENSMUSG00000055013	ProperStrand	229	chr5	130300458	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-1.3097
chr11	119519029	119532620	protein_coding	Rptor	exon	ENSMUSG00000025583	ProperStrand	76	chr4	119212352	119212442	protein_coding	Foxj3	utr5	ENSMUSG00000032998	ProperStrand	9	2	-inf
chr12	73895557	73895642	protein_coding	Ppm1a	utr3	ENSMUSG00000021096	ProperStrand	53	chr7	116663633	116663749	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	8	-20.4627
chr9	75069585	75069675	protein_coding	Myo5a	utr3	ENSMUSG00000034593	ProperStrand	89	chr16	23111421	23111501	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.7670
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr19	58929372	58929389	protein_coding	Hspa12a	intron	ENSMUSG00000025092	NonProperStrand	17	1	-10.3473
chr11	86357612	86357702	protein_coding	Rps6kb1	intron	ENSMUSG00000020516	ProperStrand	16	chr7	116663683	116663763	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.9773
chr2	32818817	32818942	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	chr5	74489560	74489680	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	31	-13.6985
chr4	53866703	53866757	protein_coding	Tmem38b	intron	ENSMUSG00000028420	ProperStrand	22	chr19	8800377	8800410	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-8.9822
chr5	22148021	22148037	lincRNA	6030443J06Rik	intron	ENSMUSG00000087558	ProperStrand	19	chr17	13115667	13115713	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	1	-9.8554
chr5	120568841	120569712	protein_coding	Rbm19	exon	ENSMUSG00000029594	ProperStrand	40	chr7	29136540	29136564	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-7.8601
chr11	102260553	102260741	protein_coding	Rundc3a	exon	ENSMUSG00000006575	ProperStrand	13	chr9	15119668	15119748	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.5260
chr7	5112074	5112154	LINE	L1Md_F2	L1	chr7L1Md_F25111136	ProperStrand	1	chr1	66298365	66298455	protein_coding	Mtap2	intron	ENSMUSG00000015222	ProperStrand	6	1	-inf
chr2	167332549	167332657	protein_coding	Rnf114	exon	ENSMUSG00000006418	ProperStrand	18	chr4	131865913	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.8813
chr12	112779125	112779219	protein_coding	Eif5	intron	ENSMUSG00000021282	ProperStrand	125	chr12	112779165	112779280	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	56	-19.2669
chr13	8756715	8766308	protein_coding	Adarb2	utr3	ENSMUSG00000052551	ProperStrand	292	chr18	35716763	35716883	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-1.1668
chr9	90256593	90256612	SINE	B1F	Alu	chr9B1F90256563	NonProperStrand	1	chr19	47970971	47970987	protein_coding	Itprip	utr3	ENSMUSG00000079254	ProperStrand	75	1	-inf
chr19	22926641	22926662	protein_coding	Trpm3	intron	ENSMUSG00000052387	ProperStrand	54	chr11	101306574	101306642	protein_coding	Rpl27	exon	ENSMUSG00000063316	ProperStrand	96	1	-12.5811
chr7	4656823	4656840	protein_coding	Brsk1	exon	ENSMUSG00000035390	ProperStrand	12	chr10	23505259	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.9771
chr14	76906612	76906630	protein_coding	Tsc22d1	utr3	ENSMUSG00000022010	ProperStrand	86	chr11	69483164	69483277	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.8593
chr5	125531369	125531385	protein_coding	Ncor2	exon	ENSMUSG00000029478	ProperStrand	377	chr10	79423845	79427731	protein_coding	Wdr18	exon	ENSMUSG00000035754	ProperStrand	16	1	-12.3177
chr8	87424151	87424195	LINE	L1MB5	L1	chr8L1MB587424008	NonProperStrand	2	chr4	106809578	106809597	protein_coding	2210012G02Rik	utr3	ENSMUSG00000028619	ProperStrand	2	2	-inf
chr9	58052077	58052093	protein_coding	1600029O15Rik	intron	ENSMUSG00000057818	ProperStrand	1	chr18	35714144	35714260	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-inf
chr9	64333076	64333098	protein_coding	Megf11	intron	ENSMUSG00000036466	NonProperStrand	64	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.0760
chr10	35447598	35447688	LTR	ORR1A1-int	MaLR	chr10ORR1A1-int35446779	ProperStrand	1	chr1	8291355	8291435	LTR	ORR1B2-int	MaLR	chr1ORR1B2-int8290998	ProperStrand	1	1	-inf
chr10	33640343	33640486	protein_coding	Zufsp	intron	ENSMUSG00000039531	ProperStrand	9	chr17	34472788	34472804	protein_coding	H2-Eb2	exon	ENSMUSG00000067341	NonProperStrand	17	2	-20.4620
chr9	21823257	21823273	protein_coding	Elavl3	exon	ENSMUSG00000003410	NonProperStrand	137	chr9	60719220	60719275	protein_coding	Uaca	exon	ENSMUSG00000034485	ProperStrand	109	1	-10.4568
chr2	31924012	31924028	protein_coding	Fam78a	utr3	ENSMUSG00000050592	NonProperStrand	340	chr1	63225269	63225294	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	1	-5.4064
chr4	126355035	126361368	protein_coding	Psmb2	exon	ENSMUSG00000028837	ProperStrand	8	chr4	131908752	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.7736
chr5	115120271	115120361	protein_coding	Gltp	utr3	ENSMUSG00000011884	ProperStrand	10	chr16	23111370	23111450	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.3721
chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr16	58435561	58435578	protein_coding	Dcbld2	intron	ENSMUSG00000035107	ProperStrand	56	1	-6.5909
chr4	123179448	123179503	protein_coding	Macf1	exon	ENSMUSG00000028649	ProperStrand	320	chr12	112779254	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-1.7952
chr4	43505656	43505715	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr4	55026312	55026338	protein_coding	Zfp462	exon	ENSMUSG00000060206	ProperStrand	37	3	-9.7147
chr17	35646929	35647013	protein_coding	Pou5f1	exon	ENSMUSG00000024406	ProperStrand	104	chr19	8800355	8800394	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-2.5489
chr14	118998564	118998654	protein_coding	Abcc4	exon	ENSMUSG00000032849	ProperStrand	137	chr19	8963088	8963168	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	4	-4.7716
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr9	78215085	78215531	protein_coding	Dppa5a	exon	ENSMUSG00000060461	ProperStrand	79	1	-6.4823
chrX	17325218	17325240	LINE	L1_Mus3	L1	chrXL1_Mus317324013	NonProperStrand	1	chr11	61648354	61648408	protein_coding	Ulk2	exon	ENSMUSG00000004798	ProperStrand	3	1	-inf
chr4	53015201	53015217	SINE	B1F1	Alu	chr4B1F153015138	ProperStrand	102	chr2	158185537	158185651	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-5.4440
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr7	109149271	109149287	protein_coding	Numa1	exon	ENSMUSG00000066306	NonProperStrand	171	1	-6.6328
chr11	107182967	107182984	protein_coding	Pitpnc1	exon	ENSMUSG00000040430	ProperStrand	46	chr18	75161106	75161596	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-7.7335
mmu-miR-1195	2	21	miRNA	mmu-miR-1195	.	mmu-miR-1195	ProperStrand	13	chr9	15119320	15119426	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	9	-inf
chr5	109123342	109123359	protein_coding	Fgfrl1	utr5	ENSMUSG00000008090	NonProperStrand	2	chr18	35716684	35716761	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-9.2832
chr10	79265450	79265467	protein_coding	Palm	intron	ENSMUSG00000035863	NonProperStrand	3	chr16	23110827	23110860	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr2	32170415	32170515	protein_coding	Dnm1	exon	ENSMUSG00000026825	ProperStrand	10	chr7	117189992	117190058	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-6.8419
chr17	35089182	35089200	processed_transcript	1110038B12Rik	.	ENSMUSG00000092203	ProperStrand	126	chr18	35716684	35716761	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.0695
chr10	21718029	21718529	protein_coding	Sgk1	exon	ENSMUSG00000019970	ProperStrand	55	chr19	8798484	8798553	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-5.3811
chr9	40610547	40610608	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr5	121655016	121655095	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	8	-5.3028
chr15	101834699	101834715	protein_coding	Krt8	utr5	ENSMUSG00000049382	NonProperStrand	6	chr15	34370545	34370610	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-8.1636
chr11	42440243	42440259	protein_coding	Gabrb2	exon	ENSMUSG00000007653	ProperStrand	248	chr8	87578951	87578993	protein_coding	Tnpo2	exon	ENSMUSG00000031691	ProperStrand	92	1	-9.6101
chr9	78023109	78023150	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr11	120439522	120439559	protein_coding	Arhgdia	utr3	ENSMUSG00000025132	ProperStrand	39	1	-6.7306
chr10	77451686	77452387	protein_coding	Pfkl	exon	ENSMUSG00000020277	ProperStrand	179	chr19	8799602	8799624	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-4.6338
chr14	118529892	118531905	protein_coding	Tgds	exon	ENSMUSG00000022130	ProperStrand	5	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-14.1387
chr2	90235312	90235331	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr12	113395611	113395727	protein_coding	Kif26a	exon	ENSMUSG00000021294	ProperStrand	8	1	-8.5166
chr1	162984102	162984202	protein_coding	Dars2	exon	ENSMUSG00000026709	ProperStrand	14	chr16	23110940	23110957	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.2008
chr13	77185823	77185873	protein_coding	Ankrd32	exon	ENSMUSG00000021597	ProperStrand	4	chr8	72474594	72474640	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	ProperStrand	112	4	-inf
chr5	107303155	107303171	protein_coding	Hfm1	intron	ENSMUSG00000043410	ProperStrand	23	chr12	17552965	17552995	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-6.9871
chr8	109948914	109948930	protein_coding	Nob1	utr5	ENSMUSG00000003848	ProperStrand	28	chr16	23110828	23110893	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.1386
chr17	35291799	35296887	protein_coding	Prrc2a	exon	ENSMUSG00000024393	ProperStrand	315	chr11	69483138	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	11	-11.1546
chr7	30525052	30525068	LTR	RLTR6-int	ERV1	chr7RLTR6-int30524190	NonProperStrand	3	chr2	32819078	32819103	protein_coding	Rpl12	exon	ENSMUSG00000038900	ProperStrand	167	1	-17.7165
chr17	79342636	79342684	protein_coding	2410091C18Rik	intron	ENSMUSG00000024082	ProperStrand	3	chr7	99524195	99524213	protein_coding	Dlg2	exon	ENSMUSG00000052572	ProperStrand	33	1	-19.4062
chr17	33975059	33975095	protein_coding	Ndufa7	exon	ENSMUSG00000041881	ProperStrand	64	chr1	162965987	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-5.9349
chr3	102853583	102854242	protein_coding	Csde1	exon	ENSMUSG00000068823	ProperStrand	122	chr7	116664812	116664892	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.4206
chr3	89354340	89354357	protein_coding	Kcnn3	intron	ENSMUSG00000000794	NonProperStrand	38	chr9	78326903	78326935	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-7.2427
chr5	65432923	65432990	protein_coding	Fam114a1	utr3	ENSMUSG00000029185	ProperStrand	7	chr9	15119704	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-6.8089
chr13	85397924	85398014	protein_coding	Rasa1	utr5	ENSMUSG00000021549	ProperStrand	48	chr10	127513531	127513611	protein_coding	Ptges3	utr3	ENSMUSG00000071072	ProperStrand	89	10	-20.5338
chr1	7206789	7206805	LINE	L1VL1	L1	chr1L1VL17206687	ProperStrand	1	chr2	133806894	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	1	-inf
chr19	5679368	5679384	protein_coding	Pcnxl3	exon	ENSMUSG00000054874	NonProperStrand	5	chr11	62418015	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-10.6776
chr10	122568034	122568113	protein_coding	Usp15	exon	ENSMUSG00000020124	ProperStrand	24	chr16	23110966	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.6072
chr8	114094508	114094573	protein_coding	Znrf1	intron	ENSMUSG00000033545	ProperStrand	13	chr4	131865913	131865986	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-11.0776
chr2	130109497	130109513	protein_coding	Idh3b	exon	ENSMUSG00000027406	ProperStrand	146	chr4	116828379	116828431	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-6.6145
chr17	35972454	35972522	protein_coding	Tubb5	exon	ENSMUSG00000001525	ProperStrand	624	chr7	95266597	95266613	protein_coding	Grm5	intron	ENSMUSG00000049583	NonProperStrand	145	1	-6.8712
chr14	30851615	30851631	protein_coding	Chdh	utr3	ENSMUSG00000015970	ProperStrand	50	chr11	97889742	97889760	protein_coding	Rpl19	exon	ENSMUSG00000017404	ProperStrand	120	1	-12.2894
chr3	101390778	101390868	protein_coding	Atp1a1	exon	ENSMUSG00000033161	ProperStrand	316	chr14	33005036	33005115	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-1.2132
chr10	16844327	16844346	LINE	L1_Mur1	L1	chr10L1_Mur116843303	ProperStrand	76	chrX	71518035	71518111	protein_coding	Rpl10	exon	ENSMUSG00000008682	ProperStrand	71	2	-19.3378
chr16	33058844	33058863	protein_coding	Rpl35a	exon	ENSMUSG00000060636	ProperStrand	33	chr5	130295413	130295506	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-6.4262
chr2	26340744	26340834	protein_coding	Notch1	exon	ENSMUSG00000026923	ProperStrand	145	chr14	65372759	65372839	snoRNA	ENSMUSG00000064442_SNORA36	.	ENSMUSG00000064442	ProperStrand	296	1	-8.3485
mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr4	57706987	57707003	protein_coding	Palm2	intron	ENSMUSG00000090053	NonProperStrand	187	2	-6.2896
chr4	116284678	116286983	protein_coding	Nasp	exon	ENSMUSG00000028693	ProperStrand	64	chr17	36097663	36097764	protein_coding	Abcf1	exon	ENSMUSG00000038762	ProperStrand	206	1	-10.7095
chr12	99497602	99497618	protein_coding	Galc	utr5	ENSMUSG00000021003	NonProperStrand	65	chr11	6428100	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-5.2625
chr9	15069885	15069901	protein_coding	Med17	exon	ENSMUSG00000031935	ProperStrand	135	chr9	120037976	120038056	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	3	-8.0365
chr12	60302815	60302831	protein_coding	Fbxo33	utr3	ENSMUSG00000035329	ProperStrand	5	chr2	26494708	26494762	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-8.0805
chrX	43700968	43700989	LTR	RMER10A	ERVL	chrXRMER10A43700712	NonProperStrand	2	chr8	72749184	72749236	protein_coding	Armc6	exon	ENSMUSG00000002343	ProperStrand	6	2	-inf
chr5	108336363	108336417	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	chr17	35089197	35089214	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	NonProperStrand	5	1	-9.9784
chr2	26493387	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr5	111121066	111121084	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	9	-9.7063
chr15	7145605	7145674	protein_coding	Lifr	utr3	ENSMUSG00000054263	ProperStrand	64	chr19	8799036	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-5.7059
chr2	155988564	155990588	protein_coding	Rbm39	exon	ENSMUSG00000027620	ProperStrand	38	chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	1	-12.3571
chr2	49475135	49475153	protein_coding	Kif5c	utr5	ENSMUSG00000026764	NonProperStrand	4	chr17	35299507	35299630	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-10.3796
chr17	27890224	27890247	protein_coding	D17Wsu92e	utr3	ENSMUSG00000056692	ProperStrand	61	chr11	69481387	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.1707
chr12	80049074	80049164	LINE	L2a	L2	chr12L2a80049076	ProperStrand	1	chr12	80049291	80049371	SINE	B2_Mm2	B2	chr12B2_Mm280049216	ProperStrand	1	1	-inf
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	125389949	125389966	protein_coding	Cep152	exon	ENSMUSG00000068394	ProperStrand	60	1	-4.4627
chr4	117317936	117317956	protein_coding	Eri3	intron	ENSMUSG00000033423	ProperStrand	246	chr11	69481335	69481435	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	3	-3.1404
chr2	118611946	118611962	protein_coding	Disp2	exon	ENSMUSG00000040035	NonProperStrand	204	chr14	76247711	76247778	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-2.0033
chr10	77525983	77526084	protein_coding	Dnmt3l	exon	ENSMUSG00000000730	ProperStrand	37	chr13	21872279	21872295	protein_coding	Hist1h1b	exon	ENSMUSG00000058773	ProperStrand	65	1	-14.1308
chr2	90924126	90924142	protein_coding	Sfpi1	intron	ENSMUSG00000002111	NonProperStrand	11	chr11	97643041	97643092	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-5.6855
chr2	32879458	32879548	protein_coding	Garnl3	intron	ENSMUSG00000038860	ProperStrand	14	chr11	97643010	97643090	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-5.1980
chr3	77089954	77090043	LINE	L1Md_F2	L1	chr3L1Md_F277089963	ProperStrand	1	chr3	77089470	77089560	LINE	L1VL1	L1	chr3L1VL177086811	ProperStrand	1	1	-inf
chr2	157262082	157262195	protein_coding	Src	intron	ENSMUSG00000027646	ProperStrand	32	chr2	26493366	26493404	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	3	-11.7386
chr2	154704305	154704349	protein_coding	Eif2s2	intron	ENSMUSG00000074656	ProperStrand	96	chr7	116664869	116664921	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-3.2608
chrX	40944841	40944857	protein_coding	Gm362	exon	ENSMUSG00000078320	ProperStrand	129	chr15	34370566	34370645	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-2.2041
chr10	98726553	98726570	protein_coding	Dusp6	exon	ENSMUSG00000019960	ProperStrand	116	chrX	84483703	84483751	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-6.9367
chr9	45341784	45341834	protein_coding	Dscaml1	intron	ENSMUSG00000032087	ProperStrand	23	chr11	69483136	69483189	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.1990
chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	chr6	115758102	115758132	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-1.0418
chr6	38147019	38203897	protein_coding	D630045J12Rik	exon	ENSMUSG00000063455	ProperStrand	22	chr4	131908693	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-10.1618
chr13	30338190	30338207	protein_coding	Mboat1	utr3	ENSMUSG00000038732	NonProperStrand	148	chr8	98269959	98270034	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-3.8145
chr8	25585556	25585573	LINE	Lx	L1	chr8Lx25585401	ProperStrand	6	chr17	24665462	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-9.6364
chr4	43505888	43505930	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr9	30877588	30877688	protein_coding	Zbtb44	utr3	ENSMUSG00000047412	ProperStrand	68	1	-2.8476
chr10	120709244	120712786	protein_coding	Tbc1d30	exon	ENSMUSG00000052302	ProperStrand	233	chr17	39985726	39985764	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-3.3487
chr11	119898502	119898520	protein_coding	Aatk	intron	ENSMUSG00000025375	NonProperStrand	4	chr2	26493425	26493490	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-9.2834
chr2	162906511	162908331	protein_coding	Mybl2	exon	ENSMUSG00000017861	ProperStrand	230	chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	1	-5.9298
chr10	20026841	20026866	LTR	RMER21A	ERV1	chr10RMER21A20026468	ProperStrand	1	chr11	69483136	69483191	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-inf
chr2	180395284	180395324	protein_coding	Dido1	exon	ENSMUSG00000038914	ProperStrand	81	chr19	8799848	8799871	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	2	-7.2857
chr15	72824958	72825048	protein_coding	Trappc9	intron	ENSMUSG00000047921	ProperStrand	44	chr3	31104890	31104970	protein_coding	Slc7a14	utr3	ENSMUSG00000069072	ProperStrand	20	1	-16.1977
chr10	79147833	79148053	protein_coding	Cdc34	exon	ENSMUSG00000020307	ProperStrand	30	chr8	98269977	98270057	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-6.9144
chr5	136707644	136707662	protein_coding	Sh2b2	exon	ENSMUSG00000005057	NonProperStrand	101	chr13	96374713	96374729	protein_coding	F2r	exon	ENSMUSG00000048376	NonProperStrand	88	1	-11.4972
chr2	157140679	157141904	protein_coding	Rpn2	exon	ENSMUSG00000027642	ProperStrand	363	chr4	40208921	40208937	protein_coding	Topors	exon	ENSMUSG00000036822	ProperStrand	40	1	-10.5243
chr8	63391338	63391398	protein_coding	Clcn3	utr3	ENSMUSG00000004319	ProperStrand	93	chr7	36119268	36119289	protein_coding	Rhpn2	utr5	ENSMUSG00000030494	ProperStrand	5	1	-17.4840
chr11	11867679	11870432	protein_coding	Grb10	exon	ENSMUSG00000020176	NonProperStrand	159	chr12	17552949	17552994	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-3.2552
chr4	144671322	144671623	protein_coding	Vps13d	exon	ENSMUSG00000020220	ProperStrand	59	chr11	116535927	116535981	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	4	-17.7440
chr11	48613940	48617786	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	chr9	15119637	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	7	-5.3918
chr5	118517070	118517160	protein_coding	Fbxw8	utr3	ENSMUSG00000032867	ProperStrand	61	chr2	26493369	26493449	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-3.7118
chr16	91641616	91641857	protein_coding	Gart	exon	ENSMUSG00000022962	ProperStrand	200	chr8	87525135	87525238	protein_coding	Hook2	exon	ENSMUSG00000052566	ProperStrand	204	1	-8.4488
chrX	148771533	148771623	protein_coding	Tspyl2	utr3	ENSMUSG00000041096	ProperStrand	23	chr16	23111387	23111467	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.7951
chr17	71271224	71271242	lincRNA	Gm16627	intron	ENSMUSG00000085299	ProperStrand	4	chr11	97643007	97643059	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-7.8635
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr4	128688520	128688562	protein_coding	Ak2	utr3	ENSMUSG00000028792	ProperStrand	43	1	-9.4603
chr1	145448407	145448497	protein_coding	Cdc73	utr3	ENSMUSG00000026361	ProperStrand	22	chr9	15118246	15118327	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-5.3884
chr5	113692415	113692431	protein_coding	Sgsm1	exon	ENSMUSG00000042216	ProperStrand	20	chr2	26494773	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-8.5906
chr5	145532202	145532273	protein_coding	Trrap	intron	ENSMUSG00000045482	ProperStrand	399	chr9	15130707	15130756	snoRNA	ENSMUSG00000077506_Scarna9	.	ENSMUSG00000077506	ProperStrand	148	5	-19.9204
chr11	116535951	116535982	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chrX	103387385	103389777	protein_coding	Pgk1	exon	ENSMUSG00000062070	ProperStrand	484	2	-3.7132
chr8	112251984	112253460	protein_coding	Atxn1l	utr3	ENSMUSG00000069895	ProperStrand	13	chr16	23110962	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	7	-18.3564
chr2	84530865	84531297	protein_coding	Zdhhc5	exon	ENSMUSG00000034075	NonProperStrand	144	chr9	64023289	64023329	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	2	-10.8078
chr5	103854542	103854558	protein_coding	Ptpn13	utr5	ENSMUSG00000034573	NonProperStrand	74	chr2	158182201	158182293	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-4.5985
chr13	96247406	96248477	protein_coding	S100z	exon	ENSMUSG00000021679	NonProperStrand	43	chr17	46701903	46701943	protein_coding	Ptk7	utr3	ENSMUSG00000023972	ProperStrand	101	1	-12.9421
chr14	31989654	31989744	protein_coding	Nisch	exon	ENSMUSG00000021910	ProperStrand	125	chr7	147125630	147125710	protein_coding	Kndc1	exon	ENSMUSG00000066129	ProperStrand	15	1	-14.6636
chr17	25802965	25803079	SINE	B4A	B4	chr17B4A25802912	ProperStrand	1	chr4	43505656	43505683	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	1	-inf
chr6	147540568	147540711	protein_coding	Ccdc91	exon	ENSMUSG00000030301	ProperStrand	15	chr13	49779720	49779745	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-9.8166
chr14	61984355	61984371	protein_coding	Kpna3	utr3	ENSMUSG00000021929	NonProperStrand	6	chr10	23505597	23505626	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-12.3000
chr8	10924953	10924969	protein_coding	3930402G23Rik	utr3	ENSMUSG00000038917	ProperStrand	13	chr7	29683732	29686970	protein_coding	Actn4	exon	ENSMUSG00000054808	ProperStrand	120	1	-15.0432
chr19	6151194	6151211	protein_coding	Batf2	intron	ENSMUSG00000039699	ProperStrand	4	chr7	52382014	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-12.3680
chr11	113516353	113516370	protein_coding	Cog1	exon	ENSMUSG00000018661	NonProperStrand	38	chr1	162965531	162965591	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.1263
chrX	22995331	22995349	DNA	URR1B	MER1_type	chrXURR1B22995281	NonProperStrand	1	chr3	68889027	68889127	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-inf
chr1	171897461	171897482	protein_coding	Hsd17b7	exon	ENSMUSG00000026675	ProperStrand	4	chr9	120039622	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	3	-20.1204
chr17	28536326	28536361	protein_coding	Fkbp5	utr3	ENSMUSG00000024222	ProperStrand	44	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-7.5430
chr4	48675745	48675835	protein_coding	Tmeff1	utr3	ENSMUSG00000028347	ProperStrand	47	chr9	78326939	78327110	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-6.8185
chr16	23111372	23111445	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	chr3	85904485	85904537	snoRNA	ENSMUSG00000065847_SNORA32	.	ENSMUSG00000065847	ProperStrand	40	4	-7.3278
chr17	35972653	35972677	protein_coding	Tubb5	exon	ENSMUSG00000001525	ProperStrand	624	chr10	80641715	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	3	-7.7293
chr9	72465118	72465145	protein_coding	Rfx7	exon	ENSMUSG00000037674	ProperStrand	20	chr9	120037972	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	3	-15.7202
chr10	7383389	7383405	protein_coding	Pcmt1	utr5	ENSMUSG00000019795	ProperStrand	55	chr10	119665173	119665204	protein_coding	Llph	exon	ENSMUSG00000020224	ProperStrand	9	1	-17.3017
chr1	72301657	72301747	snRNA	ENSMUSG00000093333_AC120136.3	.	ENSMUSG00000093333	ProperStrand	68	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-4.9688
chrX	138159145	138159161	protein_coding	Irs4	exon	ENSMUSG00000054667	NonProperStrand	98	chr1	63225254	63225284	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	1	-7.8555
chr5	92875347	92875364	protein_coding	Scarb2	exon	ENSMUSG00000029426	ProperStrand	30	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-6.5672
chr8	119466881	119466898	SINE	ID_B1	B4	chr8ID_B1119466741	ProperStrand	1	chr2	181158726	181158770	protein_coding	Zbtb46	exon	ENSMUSG00000027583	ProperStrand	7	1	-inf
chr14	73784860	73784916	protein_coding	Itm2b	exon	ENSMUSG00000022108	ProperStrand	25	chr16	37384897	37384913	protein_coding	Stxbp5l	utr5	ENSMUSG00000022829	ProperStrand	332	1	-11.6564
chr4	151481848	151481928	protein_coding	Plekhg5	exon	ENSMUSG00000039713	ProperStrand	33	chr17	24857760	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	3	-8.4615
chr17	34089214	34089379	protein_coding	Rps18	exon	ENSMUSG00000008668	ProperStrand	111	chr11	117871883	117871909	protein_coding	Pgs1	intron	ENSMUSG00000017715	ProperStrand	25	1	-13.8497
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr2	91751750	91757558	protein_coding	Ambra1	exon	ENSMUSG00000040506	ProperStrand	65	1	-5.7464
chr16	13834776	13834890	protein_coding	Pdxdc1	utr3	ENSMUSG00000022680	ProperStrand	26	chr8	129468851	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	4	-18.2486
chr12	7494258	7494274	SINE	B4A	B4	chr12B4A7494223	ProperStrand	15	chr3	94819773	94819825	lincRNA	4930481B07Rik	exon	ENSMUSG00000085956	ProperStrand	1	1	-inf
chr2	90235292	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	140212129	140212146	protein_coding	Micall2	utr5	ENSMUSG00000036718	NonProperStrand	18	2	-11.0833
chr11	6520297	6520397	protein_coding-noncoding	Tbrg4	utr3	ENSMUSG00000000384	ProperStrand	7	chr11	97643012	97643068	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-6.6269
chr5	136385342	136385374	protein_coding	Ywhag	utr3	ENSMUSG00000051391	ProperStrand	142	chr16	23110532	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.1415
chr1	71675953	71675969	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr6	125120750	125120825	protein_coding	Ncapd2	exon	ENSMUSG00000038252	ProperStrand	170	1	-5.7741
chr16	4125756	4126525	protein_coding	Crebbp	exon	ENSMUSG00000022521	ProperStrand	56	chr9	15119632	15119712	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.7499
chr4	116862616	116862662	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	chr8	13876176	13876226	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	2	-4.9886
chr3	137766093	137766125	protein_coding	Mttp	exon	ENSMUSG00000028158	ProperStrand	13	chr14	64829132	64829149	protein_coding	Msra	intron	ENSMUSG00000054733	NonProperStrand	84	1	-15.7774
chr17	21091666	21092754	protein_coding	Ppp2r1a	exon	ENSMUSG00000007564	NonProperStrand	5	chr9	120039585	120039675	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-13.6119
chr11	51789516	51789547	protein_coding	Cdkn2aipnl	utr3	ENSMUSG00000020392	ProperStrand	18	chr10	23770362	23770378	protein_coding	Taar7f	exon	ENSMUSG00000060825	NonProperStrand	40	1	-16.5467
chr5	64648165	64730834	protein_coding	Tbc1d1	exon	ENSMUSG00000029174	ProperStrand	44	chr10	23505188	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-8.9566
chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	chr15	99433434	99433451	protein_coding	Aqp6	exon	ENSMUSG00000043144	NonProperStrand	45	1	-9.8486
chrY	2849081	2849171	LTR	MuRRS4-int	ERV1	chrYMuRRS4-int2848669	ProperStrand	1	chrY	2849321	2849411	LTR	MuRRS4-int	ERV1	chrYMuRRS4-int2849247	ProperStrand	1	1	-inf
chr10	79857271	79857368	protein_coding	Mbd3	intron	ENSMUSG00000035478	ProperStrand	27	chr11	97642952	97642974	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.9172
chr6	29150892	29150982	protein_coding	Impdh1	utr3	ENSMUSG00000003500	ProperStrand	20	chr4	131865865	131865945	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.6810
chr4	85016349	85016365	protein_coding	Sh3gl2	intron	ENSMUSG00000028488	NonProperStrand	313	chr4	116826698	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-3.5995
chr4	150276588	150276629	protein_coding	Park7	intron	ENSMUSG00000028964	ProperStrand	9	chr19	8963027	8963059	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.8692
chr6	30455865	30455925	protein_coding	Tmem209	utr5	ENSMUSG00000029782	ProperStrand	36	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.8249
chr2	77024926	77024946	protein_coding	Sestd1	utr3	ENSMUSG00000042272	NonProperStrand	10	chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-11.3948
chr14	21467502	21467582	SINE	B3	B2	chr14B321467475	NonProperStrand	1	chr14	21467702	21467792	SINE	B3	B2	chr14B321467704	NonProperStrand	1	1	-inf
chr16	33214465	33214553	protein_coding	Osbpl11	exon	ENSMUSG00000022807	ProperStrand	31	chr16	23109049	23109090	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-8.6063
chr2	168574587	168592553	protein_coding	Sall4	utr3	ENSMUSG00000027547	ProperStrand	82	chr5	121655065	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	4	-10.8196
chr1	155067149	155076299	protein_coding	Lamc1	utr3	ENSMUSG00000026478	ProperStrand	239	chr16	23110484	23110584	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-1.1852
chr3	88497863	88497979	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	chr17	35087894	35087948	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	3	-1.8784
chr12	110881049	110881114	lincRNA	Rian	intron	ENSMUSG00000091793	ProperStrand	612	chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	1	-4.3460
mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	3	-3.9513
chr16	6881944	6881960	protein_coding	Rbfox1	intron	ENSMUSG00000008658	ProperStrand	29	chr16	91227718	91227735	protein_coding	Olig2	utr3	ENSMUSG00000039830	NonProperStrand	78	1	-14.2579
chr19	53082307	53082323	protein_coding	Xpnpep1	intron	ENSMUSG00000025027	NonProperStrand	58	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-7.8073
chr4	44162085	44162103	protein_coding	Rnf38	exon	ENSMUSG00000035696	ProperStrand	66	chr16	23110454	23110508	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.3006
chr11	43495518	43495534	protein_coding	Pwwp2a	utr5	ENSMUSG00000044950	NonProperStrand	18	chr16	23111772	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.0433
chr7	106627421	106627843	protein_coding	Rps3	utr3	ENSMUSG00000030744	ProperStrand	159	chr18	35102297	35102333	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-4.6890
chr4	43505808	43505898	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr7	87870493	87870554	protein_coding	Iqgap1	exon	ENSMUSG00000030536	ProperStrand	43	1	-3.6800
chr15	76444144	76444233	protein_coding	Slc39a4	exon	ENSMUSG00000063354	ProperStrand	35	chr10	23505152	23505271	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-5.6719
chr4	136099279	136099295	protein_coding	Luzp1	exon	ENSMUSG00000001089	ProperStrand	35	chr9	19452096	19452127	protein_coding	Zfp317	exon	ENSMUSG00000057551	ProperStrand	7	1	-19.0433
chr10	88235257	88235630	protein_coding	Utp20	exon	ENSMUSG00000004356	ProperStrand	45	chr12	88778642	88778722	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	11	-19.6259
chr3	66100724	66100740	protein_coding	Veph1	utr5	ENSMUSG00000027831	NonProperStrand	92	chr15	78749408	78749463	protein_coding	Pdxp	utr3	ENSMUSG00000068221	ProperStrand	2	1	-inf
chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	chr4	32819772	32819831	protein_coding	Mdn1	exon	ENSMUSG00000058006	ProperStrand	184	1	-4.7906
chr13	6593638	6593728	protein_coding-noncoding	Pfkp	utr3	ENSMUSG00000021196	ProperStrand	20	chr7	134671388	134671468	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-10.0911
chr2	38857152	38857252	protein_coding	Rpl35	exon	ENSMUSG00000062997	ProperStrand	68	chr18	33954872	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-3.2766
chr8	23735814	23735830	protein_coding	Dkk4	exon	ENSMUSG00000031535	ProperStrand	5	chr7	29136525	29136575	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-7.2327
chr15	79908494	79913349	protein_coding	Rpl3	exon	ENSMUSG00000060036	ProperStrand	8342	chr5	130295414	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	24	-4.6067
chr6	120921741	120921773	protein_coding	Mical3	intron	ENSMUSG00000051586	ProperStrand	104	chr11	68886991	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	3	-7.9138
chr4	109105596	109105613	protein_coding	Ttc39a	exon	ENSMUSG00000028555	ProperStrand	51	chr7	116664793	116664870	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.8322
chr4	43505723	43505813	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr5	31522847	31522927	protein_coding	Ppm1g	utr5	ENSMUSG00000029147	ProperStrand	69	1	-2.8219
chr2	126603084	126603102	protein_coding	Usp50	intron	ENSMUSG00000027364	ProperStrand	2	chr9	15069885	15069901	protein_coding	Med17	exon	ENSMUSG00000031935	ProperStrand	135	1	-19.2741
chr17	32453268	32453285	protein_coding	Akap8	exon	ENSMUSG00000024045	ProperStrand	339	chr9	15119630	15119766	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-1.4292
chr3	68767569	68767585	protein_coding	Ift80	exon	ENSMUSG00000027778	NonProperStrand	3	chr16	57391615	57391705	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	1	-16.7106
chr7	120195879	120195898	SINE	B4A	B4	chr7B4A120195721	ProperStrand	1	chr17	78599990	78600006	protein_coding	Crim1	utr5	ENSMUSG00000024074	ProperStrand	19	1	-inf
chr10	60784044	60813044	protein_coding	X99384	exon	ENSMUSG00000020092	ProperStrand	60	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-5.6163
chr9	111085949	111086004	protein_coding	Lrrfip2	intron	ENSMUSG00000032497	ProperStrand	28	chr10	23505178	23505268	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-11.6425
chr10	80850202	80850474	protein_coding	Dohh	exon	ENSMUSG00000078440	ProperStrand	26	chr4	131908367	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-4.8746
chr8	24352674	24352708	protein_coding	Golga7	utr3	ENSMUSG00000015341	ProperStrand	36	chr2	4829164	4829180	protein_coding	Sephs1	utr3	ENSMUSG00000026662	NonProperStrand	271	1	-11.3219
chr1	20552541	20552558	protein_coding	Pkhd1	exon	ENSMUSG00000043760	NonProperStrand	49	chr19	59534008	59534026	protein_coding	Emx2	exon	ENSMUSG00000043969	NonProperStrand	87	1	-12.9765
chr7	52382262	52382314	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	chr11	62416955	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	4	-6.1668
chr13	3564439	3564496	protein_coding	Gdi2	utr3	ENSMUSG00000021218	ProperStrand	49	chr19	8963027	8963127	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.6199
chr15	103345545	103345609	protein_coding	Pde1b	intron	ENSMUSG00000022489	ProperStrand	19	chr17	35087894	35087962	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	6	-21.2171
chrX	19944824	19944914	protein_coding	Rp2h	intron	ENSMUSG00000060090	ProperStrand	7	chr16	38158132	38158212	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	1	-13.0730
chr5	92485086	92485106	pseudogene	Gm15710	.	ENSMUSG00000084111	ProperStrand	28	chr5	92485179	92485218	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	1	-10.2767
chr15	98762391	98762432	protein_coding	Tuba1b	exon	ENSMUSG00000023004	ProperStrand	32	chr19	44188451	44188541	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	3	-19.0192
chr11	32113274	32113291	protein_coding	Rhbdf1	exon	ENSMUSG00000020282	ProperStrand	23	chr10	23505219	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.7622
chr2	38443589	38443618	protein_coding	Psmb7	utr3	ENSMUSG00000026750	ProperStrand	18	chr3	19925885	19925901	protein_coding	Hps3	exon	ENSMUSG00000027615	NonProperStrand	1	1	-inf
chr1	102076756	102076793	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	chr11	6428075	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	7	-6.2092
chr2	91725834	91725934	protein_coding	Ambra1	exon	ENSMUSG00000040506	ProperStrand	65	chr18	33954920	33954951	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-5.7416
chr11	62418045	62418074	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	2	-0.7020
chr14	64829132	64829149	protein_coding	Msra	intron	ENSMUSG00000054733	NonProperStrand	84	chr17	35089181	35089230	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-4.8324
chr1	13164519	13164536	protein_coding	Ncoa2	exon	ENSMUSG00000005886	ProperStrand	26	chr8	73419656	73419741	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-11.2810
chr3	68317887	68317977	protein_coding	Schip1	intron	ENSMUSG00000027777	ProperStrand	70	chr5	130300445	130300539	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-4.0145
chr11	6428059	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr12	110887828	110887893	snoRNA	ENSMUSG00000084549_SNORD113	.	ENSMUSG00000084549	ProperStrand	196	6	-9.2003
chr11	17882535	17882552	LTR	ORR1D1	MaLR	chr11ORR1D117882318	ProperStrand	6	chr9	15118270	15118321	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-8.0740
chr19	9079006	9079096	protein_coding	Ahnak	exon	ENSMUSG00000069833	ProperStrand	103	chr16	23111741	23111821	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.1165
chr1	183751651	183751751	protein_coding	Lbr	exon	ENSMUSG00000004880	ProperStrand	97	chr11	97642955	97643014	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.6930
chr8	24522477	24522538	protein_coding	Sfrp1	exon	ENSMUSG00000031548	ProperStrand	22	chr2	26494710	26494800	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.0039
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-3.4872
chr7	140383512	140383592	Simple_repeat	(CA)n	Simple_repeat	chr7(CA)n140383486	ProperStrand	1	chr17	6301514	6301604	protein_coding	Tmem181a	intron	ENSMUSG00000038141	NonProperStrand	2	1	-inf
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr17	35299545	35299633	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-1.3592
chr17	70905495	70905511	protein_coding	Dlgap1	intron	ENSMUSG00000003279	ProperStrand	7	chr8	32260358	32260423	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	2	-14.4671
chr11	83217468	83217592	protein_coding	Ap2b1	utr3	ENSMUSG00000035152	NonProperStrand	2	chr8	126077957	126077982	protein_coding	Gm20388	intron	ENSMUSG00000092329	ProperStrand	295	1	-17.6113
chrX	91480693	91480751	protein_coding	Klhl15	utr5	ENSMUSG00000043929	ProperStrand	6	chr5	121655017	121655107	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	5	-19.0267
chr13	7538142	7538232	LTR	RLTR17	ERVK	chr13RLTR177538088	ProperStrand	1	chr11	33570323	33570413	protein_coding	Kcnip1	intron	ENSMUSG00000053519	ProperStrand	45	1	-inf
chr14	103611795	103611820	protein_coding	Mycbp2	exon	ENSMUSG00000033004	ProperStrand	129	chr1	88247816	88247865	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-3.6444
chr15	83770046	83770063	protein_coding	Efcab6	intron	ENSMUSG00000022441	ProperStrand	60	chr19	8963027	8963084	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.2748
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr12	111891500	111891631	protein_coding	Dync1h1	intron	ENSMUSG00000018707	ProperStrand	648	5	-19.9701
chr4	116954825	116954882	protein_coding	Rnf220	intron	ENSMUSG00000028677	ProperStrand	131	chr19	8963084	8963174	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.1015
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr2	153050783	153050799	protein_coding	Tspyl3	exon	ENSMUSG00000074671	ProperStrand	228	1	-5.1128
chr17	26255320	26255830	protein_coding	Tmem8	exon	ENSMUSG00000024180	ProperStrand	10	chr16	23110986	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-7.6230
chr15	31522438	31522525	protein_coding	Cct5	exon	ENSMUSG00000022234	ProperStrand	116	chr1	46132859	46132892	protein_coding	Dnahc7b	intron	ENSMUSG00000041144	NonProperStrand	57	1	-12.0920
chr2	179928546	179928702	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr4	138953248	138953336	protein_coding	Ubr4	exon	ENSMUSG00000066036	ProperStrand	304	1	-6.4677
chr12	104406645	104407777	protein_coding	Unc79	exon	ENSMUSG00000021198	ProperStrand	99	chr11	77995188	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-5.2030
chr19	38477234	38477251	protein_coding	Tmem20	exon	ENSMUSG00000044026	NonProperStrand	23	chr4	131865929	131865966	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.4190
chr15	12199807	12199862	protein_coding	Mtmr12	utr3	ENSMUSG00000039458	ProperStrand	16	chr2	79843543	79843559	protein_coding	Pde1a	intron	ENSMUSG00000059173	NonProperStrand	275	1	-12.9494
chr2	155649673	155649690	protein_coding	Eif6	exon	ENSMUSG00000027613	ProperStrand	42	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-9.6441
chr14	76152876	76152900	protein_coding	Cog3	intron	ENSMUSG00000034893	ProperStrand	37	chr16	23111416	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-3.6133
chr19	53084582	53086261	protein_coding	Xpnpep1	exon	ENSMUSG00000025027	ProperStrand	49	chr16	23110962	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-1.9572
chr15	98762302	98762392	protein_coding	Tuba1b	exon	ENSMUSG00000023004	ProperStrand	32	chr15	88977274	88977290	protein_coding	Mapk11	intron	ENSMUSG00000053137	NonProperStrand	29	1	-16.0890
chr4	137179204	137179251	protein_coding	Usp48	exon	ENSMUSG00000043411	ProperStrand	135	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-5.3882
chr11	74481244	74481344	protein_coding	1300001I01Rik	intron	ENSMUSG00000020741	ProperStrand	76	chr1	162967513	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-3.0456
chr17	45706225	45706326	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr16	33726534	33726550	protein_coding	Heg1	exon	ENSMUSG00000075254	NonProperStrand	37	3	-17.2206
chr14	87659491	87659512	LTR	MTEa	MaLR	chr14MTEa87659331	NonProperStrand	83	chr18	35716684	35716760	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.6556
chr10	127521424	127521485	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr19	44471208	44471244	protein_coding	Scd1	utr3	ENSMUSG00000037071	ProperStrand	32	2	-15.6786
chr1	75527225	75527244	protein_coding	Stk11ip	intron	ENSMUSG00000026213	NonProperStrand	2	chr9	64022855	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-15.4791
chr2	138251889	138251906	protein_coding	Btbd3	intron	ENSMUSG00000062098	NonProperStrand	121	chr1	89673687	89673784	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-2.0527
chr16	73004880	73004896	protein_coding	Robo1	exon	ENSMUSG00000022883	ProperStrand	47	chr7	4745216	4745684	protein_coding	Rpl28	exon	ENSMUSG00000030432	ProperStrand	220	1	-11.2002
chr4	131825994	131826128	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	chr4	131865887	131865986	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	6	-1.0384
chr8	86535304	86535320	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	chr18	35714193	35714291	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-3.3499
chr8	72613823	72613839	protein_coding	Hapln4	utr3	ENSMUSG00000007594	NonProperStrand	85	chr7	16524110	16524178	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	1	-9.0198
chr5	122029641	122029686	protein_coding	Aldh2	exon	ENSMUSG00000029455	ProperStrand	108	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-6.5604
chr9	110141380	110141425	protein_coding	Smarcc1	utr3	ENSMUSG00000032481	ProperStrand	108	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-6.5604
chr2	156349393	156349425	protein_coding	Epb4.1l1	intron	ENSMUSG00000027624	ProperStrand	27	chr8	73419684	73419774	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.6289
chrX	7351526	7351616	protein_coding	Tfe3	utr3	ENSMUSG00000000134	ProperStrand	10	chr6	28430453	28430543	protein_coding	Snd1	utr5	ENSMUSG00000001424	ProperStrand	210	1	-14.4696
chr4	139189890	139190623	protein_coding	Aldh4a1	exon	ENSMUSG00000028737	ProperStrand	20	chr7	114354093	114354114	protein_coding	Rbmxl2	exon	ENSMUSG00000073894	NonProperStrand	1	1	-inf
chr1	120580804	120580869	protein_coding	Tfcp2l1	utr3	ENSMUSG00000026380	ProperStrand	158	chr6	94776847	94776873	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	3	-16.1554
chr12	111932369	111932482	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr1	162967155	162967178	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	2	-6.3265
chr5	4359986	4360003	LTR	RMER17D2	ERVK	chr5RMER17D24359607	NonProperStrand	2	chr3	101243319	101243352	protein_coding	Igsf3	exon	ENSMUSG00000042035	ProperStrand	73	1	-21.4012
chr8	122082082	122082124	protein_coding	Mbtps1	intron	ENSMUSG00000031835	ProperStrand	81	chr7	91283906	91283932	protein_coding	Fam108c	intron	ENSMUSG00000038459	ProperStrand	19	1	-15.0390
chr11	62416575	62416639	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	chr1	162966190	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	4	-2.9953
chr6	71832550	71832687	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	chr8	32260321	32260426	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	8	-1.2620
chr10	62302290	62302380	protein_coding	Tet1	exon	ENSMUSG00000047146	NonProperStrand	7	chr2	26768363	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	NonProperStrand	6	2	-19.5001
chr14	65806213	65806229	LTR	MTD	MaLR	chr14MTD65806111	ProperStrand	8	chr15	98350209	98350273	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-8.8278
chr9	78215795	78215895	protein_coding	Dppa5a	exon	ENSMUSG00000060461	ProperStrand	79	chr8	125626945	125627005	snoRNA	ENSMUSG00000064450_Snord68	.	ENSMUSG00000064450	ProperStrand	181	1	-10.5453
chr2	130103893	130103948	protein_coding	Nop56	exon	ENSMUSG00000027405	ProperStrand	125	chr14	31953025	31953118	protein_coding	Stab1	exon	ENSMUSG00000042286	NonProperStrand	127	1	-10.3343
chr13	55141979	55152112	protein_coding	Uimc1	utr3	ENSMUSG00000025878	ProperStrand	25	chr16	23110840	23110934	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-5.7718
chr7	117425515	117425595	protein_coding	Swap70	utr3	ENSMUSG00000031015	ProperStrand	47	chr10	110918602	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-3.9024
chr11	69480669	69480781	protein_coding	Eif4a1	utr3	ENSMUSG00000059796	ProperStrand	108	chr7	116664820	116664859	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.5990
chr5	92804556	92804572	protein_coding	Art3	intron	ENSMUSG00000034842	ProperStrand	2	chr9	120038491	120038550	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-10.2959
chr17	30730204	30730229	protein_coding	Glo1	utr3	ENSMUSG00000024026	ProperStrand	75	chr12	17552960	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-4.6587
chr2	90235314	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	135553858	135553945	protein_coding	Zc3h11a	intron	ENSMUSG00000026464	ProperStrand	102	1	-3.4684
chr16	23111370	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	chr2	130101241	130101310	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	31	-0.8509
chr3	129529781	129529797	protein_coding	Gar1	exon	ENSMUSG00000028010	ProperStrand	10	chr16	23110827	23110851	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.7978
chr11	69870769	69870785	protein_coding	Asgr1	exon	ENSMUSG00000020884	NonProperStrand	145	chrX	71190566	71190603	protein_coding	Hcfc1	exon	ENSMUSG00000031386	ProperStrand	424	1	-7.6350
chr19	47418346	47418446	protein_coding	Sh3pxd2a	intron	ENSMUSG00000053617	ProperStrand	57	chr11	69481334	69481411	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.2937
chr15	83207067	83207104	protein_coding	Pacsin2	utr3	ENSMUSG00000016664	ProperStrand	30	chr15	79913292	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-8.1382
chr5	139046998	139047015	protein_coding	Zfp68	utr3	ENSMUSG00000058291	ProperStrand	17	chr7	133908837	133908891	protein_coding	Mapk3	utr3	ENSMUSG00000063065	ProperStrand	9	2	-26.8578
chr5	122022056	122022146	protein_coding	Aldh2	exon	ENSMUSG00000029455	ProperStrand	108	chr5	130300470	130300550	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	6	-10.5549
chr5	100855902	100855953	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr2	22444174	22444234	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	3	-4.5500
chr2	158182201	158182278	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	chr12	110918156	110918221	snoRNA	ENSMUSG00000065749_AF357428	.	ENSMUSG00000065749	ProperStrand	218	1	-2.6184
chr4	76614453	76614470	protein_coding	Ptprd	intron	ENSMUSG00000028399	ProperStrand	198	chr19	8799581	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-4.4417
chr9	78327852	78327942	protein_coding	Eef1a1	exon	ENSMUSG00000037742	NonProperStrand	16	chr5	130300466	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	NonProperStrand	11	1	-18.9924
chr3	36359414	36360841	protein_coding	Anxa5	exon	ENSMUSG00000027712	ProperStrand	19	chr17	24856620	24856711	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	17	-inf
chr4	94822552	94822568	antisense	BC042782	.	ENSMUSG00000087366	NonProperStrand	6	chr7	116663683	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-11.5593
chr2	26767920	26767947	protein_coding	Rpl7a	exon	ENSMUSG00000062647	ProperStrand	234	chr19	8798505	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-2.6833
chr4	128867196	128867212	protein_coding	Yars	exon	ENSMUSG00000028811	ProperStrand	131	chr3	95980296	95980321	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-5.3234
chr6	124884615	124884645	protein_coding	Mlf2	exon	ENSMUSG00000030120	ProperStrand	80	chr10	110918485	110918590	protein_coding	Nap1l1	intron	ENSMUSG00000058799	ProperStrand	185	1	-10.4761
chr12	53230777	53230877	protein_coding	Nubpl	intron	ENSMUSG00000035142	ProperStrand	16	chr19	8798743	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-7.4267
chr15	78273745	78273762	protein_coding	Tmprss6	intron	ENSMUSG00000016942	ProperStrand	7	chr5	113708281	113708516	protein_coding	Sgsm1	exon	ENSMUSG00000042216	ProperStrand	20	1	-19.1455
chr2	91771043	91771123	protein_coding	Mdk	exon	ENSMUSG00000027239	ProperStrand	56	chr11	30750612	30750702	protein_coding	Psme4	exon	ENSMUSG00000040850	ProperStrand	40	1	-14.2724
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr9	64143799	64143873	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-2.4722
chr17	46541113	46541148	misc_RNA	7SK	.	ENSMUSG00000065808	ProperStrand	16	chr11	62416578	62416655	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-7.8033
chr10	88412381	88412399	protein_coding	Ano4	utr3	ENSMUSG00000035189	ProperStrand	21	chr6	131330343	131330409	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	ProperStrand	408	1	-11.5999
chr7	149562598	149562743	protein_coding	Ctsd	exon	ENSMUSG00000007891	ProperStrand	60	chr5	23928893	23928910	protein_coding	Cdk5	intron	ENSMUSG00000028969	NonProperStrand	11	1	-16.7349
chr7	52349186	52349255	protein_coding	Fcgrt	exon	ENSMUSG00000003420	ProperStrand	4	chr3	93250306	93250322	protein_coding	Tchh	exon	ENSMUSG00000052415	ProperStrand	26	1	-19.1369
chr2	30206148	30206169	protein_coding	Sh3glb2	exon	ENSMUSG00000026860	ProperStrand	8	chr2	26766584	26766979	protein_coding	Rpl7a	exon	ENSMUSG00000062647	ProperStrand	234	1	-14.7188
chr17	13112529	13112563	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	chr8	112363233	112363275	snoRNA	ENSMUSG00000077549_Snord71	.	ENSMUSG00000077549	ProperStrand	196	1	-2.4236
chr4	116827793	116827892	snoRNA	ENSMUSG00000064751_SNORD46	.	ENSMUSG00000064751	ProperStrand	132	chr10	23505152	23505279	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-2.4168
chr2	31924012	31924028	protein_coding	Fam78a	utr3	ENSMUSG00000050592	NonProperStrand	340	chrX	84483703	84483721	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-4.8376
chr17	25517170	25517224	protein_coding	Cacna1h	exon	ENSMUSG00000024112	ProperStrand	30	chr4	131908687	131908722	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-8.5931
chr11	101628270	101628360	protein_coding	Dhx8	utr3	ENSMUSG00000034931	ProperStrand	48	chr12	17552963	17553043	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-5.5244
chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	chr1	63225253	63225284	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	1	-4.8617
chr9	120038466	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	chr13	49779692	49779805	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	8	-0.8350
chr6	54379743	54379760	lincRNA	9130019P16Rik	exon	ENSMUSG00000073067	ProperStrand	255	chr18	35714219	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-1.1027
chr5	143665442	143668355	protein_coding	Actb	utr5	ENSMUSG00000029580	ProperStrand	446	chr1	162965981	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	7	-7.1837
chr5	122683659	122683675	protein_coding	Hvcn1	exon	ENSMUSG00000064267	ProperStrand	182	chr17	35088964	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-3.7412
chr4	108302204	108302336	protein_coding	Cc2d1b	exon	ENSMUSG00000028582	ProperStrand	13	chr10	23506278	23506330	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	5	-inf
chr14	55571513	55571869	protein_coding	Myh6	exon	ENSMUSG00000040752	ProperStrand	7	chr7	13896618	13896641	protein_coding	Lig1	utr3	ENSMUSG00000056394	ProperStrand	89	4	-inf
chr1	88247742	88247804	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	chr2	26768049	26768121	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	1	-0.9353
chrX	71189113	71200438	protein_coding	Hcfc1	utr3	ENSMUSG00000031386	ProperStrand	424	chr12	88778631	88778767	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	2	-4.8542
chr17	39985196	39985763	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr11	62416603	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	7	-2.4044
chr9	64022796	64023097	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	chr1	66521957	66521973	protein_coding	Unc80	intron	ENSMUSG00000055567	NonProperStrand	212	1	-6.1743
chr9	25059948	25059964	protein_coding	Sept7	intron	ENSMUSG00000001833	ProperStrand	101	chr5	121655032	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-4.8764
chr8	128796755	128796773	LTR	MLT2B2	ERVL	chr8MLT2B2128796722	NonProperStrand	1	chr19	9042849	9043680	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	1	-inf
chr13	95139538	95139556	protein_coding	Ap3b1	intron	ENSMUSG00000021686	ProperStrand	96	chr12	83464045	83464104	protein_coding	Sipa1l1	exon	ENSMUSG00000042700	ProperStrand	84	1	-11.6931
chr4	135307697	135307715	protein_coding	Il22ra1	utr3	ENSMUSG00000037157	ProperStrand	1	chr13	46862888	46863020	snoRNA	ENSMUSG00000064558_SNORA55	.	ENSMUSG00000064558	ProperStrand	187	1	-inf
chr8	128831139	128831156	protein_coding	Slc35f3	intron	ENSMUSG00000057060	ProperStrand	5	chr19	8799033	8799083	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-10.9603
chr13	19684241	19684257	protein_coding	Epdr1	utr3	ENSMUSG00000002808	ProperStrand	46	chr1	90123798	90124639	protein_coding	Heatr7b1	utr5	ENSMUSG00000079429	ProperStrand	147	1	-12.0505
chr8	71351177	71351277	protein_coding	Ints10	exon	ENSMUSG00000031864	ProperStrand	28	chr16	23111779	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.2134
chr17	27559700	27559717	protein_coding	Grm4	utr3	ENSMUSG00000063239	ProperStrand	147	chr19	46079316	46079332	protein_coding	Hps6	exon	ENSMUSG00000074811	ProperStrand	56	1	-11.6538
chrX	148326376	148326437	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	chr17	13115708	13115785	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	1	-3.4353
chr18	67835382	67835435	protein_coding	Ptpn2	exon	ENSMUSG00000024539	ProperStrand	35	chr2	63936035	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-8.9433
chr15	9039210	9039245	protein_coding	1110020G09Rik	utr3	ENSMUSG00000022253	ProperStrand	15	chr16	23110912	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.0842
chr9	20718509	20720194	protein_coding	Dnmt1	exon	ENSMUSG00000004099	ProperStrand	91	chr4	43943351	43943367	protein_coding	Reck	intron	ENSMUSG00000028476	NonProperStrand	36	1	-13.5078
chr12	104317206	104317223	protein_coding	Unc79	exon	ENSMUSG00000021198	ProperStrand	99	chr3	16102961	16103061	protein_coding	Ythdf3	intron	ENSMUSG00000047213	ProperStrand	22	1	-14.3496
chr6	85109651	85109741	SINE	ID_B1	B4	chr6ID_B185109651	ProperStrand	1	chr6	85109470	85109560	SINE	MIR	MIR	chr6MIR85109435	NonProperStrand	1	1	-inf
chr19	9018542	9020258	protein_coding	Mta2	exon	ENSMUSG00000071646	ProperStrand	70	chr3	108357255	108357490	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	2	-7.0984
chr11	102294590	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr3	132554382	132554398	protein_coding	Npnt	exon	ENSMUSG00000040998	ProperStrand	14	1	-11.8537
chr11	115443695	115443777	protein_coding	Nup85	intron	ENSMUSG00000020739	ProperStrand	33	chr4	131908236	131908295	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.3621
chr2	121949510	121949526	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	chr18	12172461	12172477	protein_coding	6030446N20Rik	intron	ENSMUSG00000049411	ProperStrand	235	1	-7.5713
chr1	52225982	52226072	protein_coding	Gls	intron	ENSMUSG00000026103	ProperStrand	56	chr8	119155794	119155874	protein_coding	Cdyl2	intron	ENSMUSG00000031758	NonProperStrand	9	1	-17.2770
chr14	52790578	52790626	protein_coding	Supt16h	exon	ENSMUSG00000035726	ProperStrand	193	chr16	23111721	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	6	-4.9613
chr13	19462123	19462143	protein_coding	Stard3nl	exon	ENSMUSG00000003062	ProperStrand	8	chr9	40611665	40611739	snoRNA	ENSMUSG00000075876_Snord14c	.	ENSMUSG00000075876	ProperStrand	104	1	-16.3507
chr15	98677619	98677817	protein_coding	Mll2	exon	ENSMUSG00000048154	ProperStrand	170	chr7	148634747	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-2.1379
chr11	87240292	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	chr11	69483152	69483232	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-0.7724
chr16	3979871	3979951	protein_coding	Slx4	exon	ENSMUSG00000039738	ProperStrand	18	chr16	23110909	23110999	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-3.3354
chr15	36527799	36527867	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr1	162968221	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-1.8036
chr8	124937357	124937841	protein_coding	Zc3h18	exon	ENSMUSG00000017478	ProperStrand	55	chr4	131865856	131865936	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.9045
chr7	52381268	52382378	protein_coding	Rpl13a	exon	ENSMUSG00000074129	ProperStrand	269	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-1.7449
chr6	31656776	31656793	lincRNA	Gm13847	intron	ENSMUSG00000086804	ProperStrand	1	chr4	131865446	131865856	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-inf
chrX	42884761	42884778	LINE	L1_Mur3	L1	chrXL1_Mur342884763	NonProperStrand	11	chr11	62416604	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-8.5772
chr2	105012751	105012769	protein_coding	Wt1	utr3	ENSMUSG00000016458	NonProperStrand	338	chr5	130295414	130295491	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-2.0979
chr7	3500774	3500826	protein_coding	Tarm1	intron	ENSMUSG00000053338	ProperStrand	2	chr1	129228452	129228519	snoRNA	ENSMUSG00000093146_AC131793.1	.	ENSMUSG00000093146	ProperStrand	119	2	-inf
chr4	43505657	43505680	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr12	117586225	117586756	protein_coding	Esyt2	exon	ENSMUSG00000021171	ProperStrand	19	1	-5.2538
chr2	157942821	157942911	protein_coding	Tgm2	utr3	ENSMUSG00000037820	ProperStrand	44	chr1	89681150	89681230	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-6.0503
chr3	151464237	151464253	protein_coding	Ptgfr	utr3	ENSMUSG00000028036	ProperStrand	2	chr19	9047031	9047053	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	1	-16.9630
chr7	52382049	52382094	protein_coding-noncoding	Rpl13a	utr3	ENSMUSG00000074129	ProperStrand	106	chr8	98270014	98270082	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	6	-18.8848
chr15	78271728	78271745	protein_coding	Tmprss6	intron	ENSMUSG00000016942	ProperStrand	7	chr12	110874223	110874283	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	1	-14.4010
chr11	4581342	4581362	protein_coding	Ascc2	intron	ENSMUSG00000020412	ProperStrand	27	chr14	75673798	75673816	protein_coding	Cpb2	intron	ENSMUSG00000021999	ProperStrand	1	1	-inf
chr1	19423431	19423521	LINE	Lx6	L1	chr1Lx619423259	NonProperStrand	1	chr1	32711750	32711830	protein_coding	Khdrbs2	intron	ENSMUSG00000026058	NonProperStrand	4	1	-inf
chr3	96218437	96218527	misc_RNA	Telomerase-vert	.	ENSMUSG00000064796	ProperStrand	443	chr7	117166725	117166805	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-1.3459
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr13	97903535	97903586	protein_coding	Nsa2	exon	ENSMUSG00000060739	ProperStrand	9	1	-10.7940
chr6	143813837	143813853	protein_coding	Sox5	intron	ENSMUSG00000041540	NonProperStrand	49	chr11	62416603	62416654	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-5.5616
chr18	10052131	10052151	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr13	74464496	74464785	protein_coding	Sdha	exon	ENSMUSG00000021577	ProperStrand	70	10	-20.7237
chr4	106111701	106111717	protein_coding	Usp24	utr3	ENSMUSG00000028514	ProperStrand	74	chr2	109758179	109758220	protein_coding	Lgr4	utr5	ENSMUSG00000050199	ProperStrand	27	1	-14.5078
chr12	60476078	60476094	LTR	LTR16D	ERVL	chr12LTR16D60475969	NonProperStrand	17	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-13.3266
chr3	36666458	36666478	LTR	MTC	MaLR	chr3MTC36666456	ProperStrand	1	chr11	36343835	36343851	protein_coding	Odz2	intron	ENSMUSG00000049336	ProperStrand	106	1	-inf
chr17	4082141	4082231	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr5	135529906	135529986	snoRNA	ENSMUSG00000088008_SCARNA20	.	ENSMUSG00000088008	ProperStrand	139	1	-8.2839
chr19	38893592	38893608	protein_coding	Noc3l	utr5	ENSMUSG00000024999	NonProperStrand	149	chr9	120039624	120039675	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.7720
chr11	6007781	6007847	protein_coding	Nudcd3	utr3	ENSMUSG00000053838	ProperStrand	26	chr7	116664841	116664868	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-4.0736
chr18	30021181	30021201	LINE	Lx6	L1	chr18Lx630021111	ProperStrand	1	chr17	24665449	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-inf
chr2	61581902	61581931	protein_coding	Psmd14	intron	ENSMUSG00000026914	ProperStrand	16	chr10	23505152	23505204	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-8.7611
chr6	118038150	118038240	protein_coding	Rasgef1a	exon	ENSMUSG00000030134	ProperStrand	6	chr5	108336402	108336482	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-9.5743
chr3	82875172	82875195	protein_coding	Plrg1	exon	ENSMUSG00000027998	ProperStrand	16	chr7	52381722	52381799	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	2	-16.1928
chr1	135557330	135557367	protein_coding	Zc3h11a	intron	ENSMUSG00000026464	ProperStrand	102	chr16	23110492	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.6081
chr2	31544806	31640442	protein_coding	Abl1	intron	ENSMUSG00000026842	ProperStrand	131	chr19	8963028	8963165	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-3.4482
chr15	36526831	36527231	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr15	79908929	79908996	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	4	-4.1425
chr3	90154270	90154321	protein_coding	Gatad2b	intron	ENSMUSG00000042390	ProperStrand	21	chr8	73033209	73033251	protein_coding	2810422J05Rik	exon	ENSMUSG00000055553	ProperStrand	171	4	-18.9069
chr3	137882479	137882496	protein_coding	Adh7	intron	ENSMUSG00000055301	NonProperStrand	1	chr16	23110902	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr11	78313939	78313956	protein_coding	Vtn	exon	ENSMUSG00000017344	ProperStrand	188	chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-4.2397
chr8	98269959	98270049	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	chr10	23505598	23505629	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-0.7129
chr17	46298958	46299048	protein_coding-noncoding	Gtpbp2	utr5	ENSMUSG00000023952	ProperStrand	11	chr10	23505202	23505282	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	7	-20.9383
chr17	24869755	24869771	protein_coding	Rpl3l	utr5	ENSMUSG00000002500	NonProperStrand	56	chr8	32260397	32260427	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-4.7627
chr12	111931021	111932467	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr10	110918551	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	8	-4.6758
chr9	97180687	97180767	LINE	L1MA4	L1	chr9L1MA497180656	NonProperStrand	1	chr9	97180955	97181045	Low_complexity	CT-rich	Low_complexity	chr9CT-rich97180977	ProperStrand	1	1	-inf
chr2	20770354	20770372	protein_coding	Arhgap21	exon	ENSMUSG00000036591	ProperStrand	49	chr7	152118581	152118597	protein_coding	Ccnd1	exon	ENSMUSG00000070348	ProperStrand	93	1	-12.8413
chr6	119524147	119524241	protein_coding	Erc1	utr3	ENSMUSG00000030172	ProperStrand	69	chr1	162967519	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-3.2194
chr13	46490579	46490597	LTR	MLT1A0	MaLR	chr13MLT1A046490569	ProperStrand	11	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-12.0541
chr5	100855902	100855973	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr2	24775082	24775099	protein_coding	Ehmt1	utr5	ENSMUSG00000036893	ProperStrand	45	1	-7.2102
chr2	32817270	32817344	protein_coding	Rpl12	utr5	ENSMUSG00000038900	ProperStrand	167	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-1.8274
chr7	51097699	51097718	protein_coding	Klk5	exon	ENSMUSG00000074155	ProperStrand	29	chr16	23111704	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-8.0579
chr4	57706987	57707003	protein_coding	Palm2	intron	ENSMUSG00000090053	NonProperStrand	187	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.3999
chr11	107405544	107405634	processed_transcript	A830035A12Rik	.	ENSMUSG00000059706	NonProperStrand	1	chr11	107407214	107407294	processed_transcript	A830035A12Rik	.	ENSMUSG00000059706	ProperStrand	3	1	-inf
chr11	62216938	62216954	protein_coding	Ncor1	exon	ENSMUSG00000018501	ProperStrand	132	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-7.3537
chr9	78327517	78327718	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr19	12086466	12086494	tRNA	tRNA109-ValTAC	.	1176337	ProperStrand	96	1	-5.4123
chr13	104555419	104555494	protein_coding	Srek1	intron	ENSMUSG00000032621	ProperStrand	41	chr2	26494710	26494840	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	8	-inf
chr13	95317761	95317825	protein_coding	Ap3b1	utr3	ENSMUSG00000021686	ProperStrand	96	chr16	23110541	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-4.8396
chr1	134888456	134888523	protein_coding	Mdm4	utr3	ENSMUSG00000054387	ProperStrand	95	chr17	24857749	24857849	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-2.9222
chr12	118097626	118097643	protein_coding	Ptprn2	exon	ENSMUSG00000056553	NonProperStrand	38	chr10	79518976	79519038	protein_coding	Gpx4	utr3	ENSMUSG00000075706	ProperStrand	55	1	-14.4140
chr11	4820972	4820990	protein_coding	Thoc5	intron	ENSMUSG00000034274	ProperStrand	325	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-2.1210
chr9	21069789	21069840	protein_coding	Atg4d	utr5	ENSMUSG00000002820	ProperStrand	9	chr18	35716789	35716879	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-5.7446
chr4	99577397	99577413	protein_coding	Itgb3bp	intron	ENSMUSG00000028549	ProperStrand	55	chr10	23505152	23505266	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-5.7993
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr7	30891011	30891043	protein_coding	Zfp260	utr3	ENSMUSG00000049421	ProperStrand	7	1	-11.3322
chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	chr9	58884070	58884086	protein_coding	Neo1	utr5	ENSMUSG00000032340	ProperStrand	35	1	-13.6567
chrX	70237450	70237471	miRNA	Mir2137	.	ENSMUSG00000089357	ProperStrand	50	chr14	76247807	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-4.5194
chr9	64333076	64333098	protein_coding	Megf11	intron	ENSMUSG00000036466	NonProperStrand	64	chr4	116828389	116828454	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-8.2531
chr16	62967117	62967135	Other	RMER1A	Other	chr16RMER1A62967022	ProperStrand	2	chr1	63225254	63225312	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	1	-16.3736
chr8	106750612	106750629	protein_coding	Tk2	utr3	ENSMUSG00000035824	ProperStrand	3	chr2	26494766	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-9.2771
chr2	28324355	28324372	protein_coding	Mrps2	exon	ENSMUSG00000035772	NonProperStrand	47	chr1	72871505	72895707	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	1	-9.9753
chr2	90235294	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	87579357	87579374	protein_coding	Bzrap1	exon	ENSMUSG00000034156	ProperStrand	21	2	-10.6007
chr17	48549483	48549505	protein_coding	AI314976	utr5	ENSMUSG00000040771	ProperStrand	5	chr16	23110911	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr2	32817292	32817342	protein_coding	Rpl12	utr5	ENSMUSG00000038900	ProperStrand	167	chr16	23110533	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-0.9364
chr7	54203395	54206215	protein_coding	Uevld	exon	ENSMUSG00000043262	ProperStrand	23	chr11	97642970	97643038	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-10.3230
chr4	129522416	129523751	protein_coding	Ptp4a2	exon	ENSMUSG00000028788	ProperStrand	27	chr5	130300461	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.9586
chr11	88158027	88158139	protein_coding	Msi2	utr3	ENSMUSG00000069769	ProperStrand	159	chr4	116827144	116827187	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	11	-21.9818
chr11	95541161	95541251	protein_coding	Phb	utr3	ENSMUSG00000038845	ProperStrand	126	chr1	87983870	87983950	snoRNA	ENSMUSG00000077274_SNORA26	.	ENSMUSG00000077274	ProperStrand	361	35	-inf
chrX	50309258	50309274	protein_coding	Phf6	utr3	ENSMUSG00000025626	ProperStrand	7	chr16	23111690	23111753	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.9463
chr5	117559802	117559818	protein_coding	Suds3	exon	ENSMUSG00000066900	NonProperStrand	8	chr16	23111776	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.6662
chr6	83642874	83642974	antisense	Vax2os2	.	ENSMUSG00000092177	ProperStrand	7	chr5	74489613	74489678	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-8.0767
chr1	75471435	75471525	protein_coding	Chpf	utr3	ENSMUSG00000032997	ProperStrand	12	chr7	51505224	51505304	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	5	-21.1175
chr14	33015301	33015318	protein_coding	Parg	utr5	ENSMUSG00000021911	ProperStrand	33	chr4	131908689	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.1302
chr3	145121729	145121819	protein_coding	Col24a1	intron	ENSMUSG00000028197	ProperStrand	33	chr2	43908269	43908359	protein_coding	Arhgap15	intron	ENSMUSG00000049744	NonProperStrand	10	1	-17.7574
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr3	141129296	141129313	protein_coding	Unc5c	intron	ENSMUSG00000059921	NonProperStrand	19	1	-11.7003
chr18	36922359	36922510	protein_coding	Wdr55	exon	ENSMUSG00000042660	ProperStrand	5	chr7	117190037	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-8.3295
chr5	116010825	116011452	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	chr4	131865855	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	10	-6.7370
chr6	48410411	48410429	protein_coding	Sspo	exon	ENSMUSG00000029797	NonProperStrand	94	chr9	64143735	64143876	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-6.8794
chr7	4096973	4097017	protein_coding	Leng8	exon	ENSMUSG00000035545	ProperStrand	49	chr1	89673612	89673702	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	3	-9.0127
chr3	129593346	129597697	protein_coding	Pla2g12a	intron	ENSMUSG00000027999	ProperStrand	6	chr17	35089181	35089231	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-10.1991
chr7	88471252	88472915	protein_coding	Pde8a	exon	ENSMUSG00000025584	ProperStrand	25	chr2	32818887	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-7.2088
chr6	89059160	89059201	protein_coding	4933427D06Rik	utr3	ENSMUSG00000055403	ProperStrand	12	chr9	120039567	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-6.4506
chr18	56912635	56912655	protein_coding	Lmnb1	utr3	ENSMUSG00000024590	ProperStrand	176	chr9	39358287	39358304	protein_coding	Olfr958	exon	ENSMUSG00000050853	NonProperStrand	266	1	-8.1753
chr2	120300388	120300404	protein_coding	Capn3	intron	ENSMUSG00000079110	NonProperStrand	18	chr14	76247753	76247791	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-6.5333
chr10	80950113	80950168	protein_coding	Ncln	utr3	ENSMUSG00000020238	ProperStrand	18	chr9	95757968	95757985	pseudogene	1700065D16Rik	.	ENSMUSG00000051368	ProperStrand	2	1	-inf
chr2	25563070	25563086	antisense	A230005M16Rik	.	ENSMUSG00000087612	ProperStrand	103	chr11	106362557	106362628	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-6.3336
chr3	17826427	17826445	LINE	L1M4	L1	chr3L1M417826325	ProperStrand	6	chr4	131865884	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-10.2022
chr11	79506867	79506946	protein_coding	Rab11fip4	utr3	ENSMUSG00000017639	ProperStrand	30	chr10	110918636	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-4.7609
chr2	174171046	174171232	protein_coding	Gnas	utr3	ENSMUSG00000027523	ProperStrand	41	chr4	131908381	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.0019
chr11	55296288	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	chr4	130305550	130305620	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	1	-2.9627
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr15	78859153	78859211	pseudogene	H1f0	.	ENSMUSG00000048769	ProperStrand	6	1	-10.6285
chr1	138110862	138110962	protein_coding	5730559C18Rik	utr3	ENSMUSG00000041605	ProperStrand	22	chr13	8766323	8766341	protein_coding	Adarb2	utr3	ENSMUSG00000052551	NonProperStrand	61	4	-20.9358
chrX	45828864	45828881	protein_coding	Aifm1	exon	ENSMUSG00000036932	NonProperStrand	7	chr4	48573938	48573960	protein_coding	5730528L13Rik	exon	ENSMUSG00000039693	ProperStrand	3	1	-inf
chr18	44576782	44576836	protein_coding	Dcp2	intron	ENSMUSG00000024472	ProperStrand	44	chr14	76247741	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-4.7655
chr7	16524947	16525000	protein_coding	Gltscr2	exon	ENSMUSG00000041560	ProperStrand	127	chr5	74489587	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-2.4373
chr4	140121137	140121154	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	chr9	15119675	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-2.5347
chr1	173332298	173332314	protein_coding	Arhgap30	exon	ENSMUSG00000048865	NonProperStrand	15	chr11	6428107	6428156	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.8593
chr2	29108390	29108406	processed_transcript	6530402F18Rik	.	ENSMUSG00000079499	NonProperStrand	2	chr5	121655052	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-11.0755
chr12	106019350	106019408	protein_coding	Clmn	exon	ENSMUSG00000021097	ProperStrand	50	chr5	108336372	108336462	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-5.2347
chr4	132383923	132384013	protein_coding	Ppp1r8	exon	ENSMUSG00000028882	ProperStrand	13	chr19	8963096	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.1201
chr19	41991155	41991220	protein_coding	Pgam1	exon	ENSMUSG00000011752	ProperStrand	124	chr7	70766769	70766786	protein_coding	Otud7a	intron	ENSMUSG00000033510	ProperStrand	16	1	-14.5516
chr18	76195408	76195498	protein_coding	Zbtb7c	intron	ENSMUSG00000044646	ProperStrand	64	chrX	34622927	34623007	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-3.0550
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr8	98269959	98270091	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-1.6117
chr9	40612830	40612921	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	chrX	34622905	34623012	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	5	-3.8518
chr5	74489233	74489303	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr9	92440258	92440274	protein_coding	Plod2	intron	ENSMUSG00000032374	ProperStrand	52	1	-5.9029
chr10	22424422	22424512	protein_coding	Tbpl1	utr3	ENSMUSG00000071359	ProperStrand	4	chr4	131908814	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-6.2660
chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	chr15	75578031	75578047	protein_coding	Mafa	exon	ENSMUSG00000047591	ProperStrand	2	1	-18.3603
chr11	101797333	101797423	LINE	L1M5	L1	chr11L1M5101797192	NonProperStrand	1	chr11	101797537	101797627	SINE	ID_B1	B4	chr11ID_B1101797513	NonProperStrand	1	1	-inf
chr14	33005134	33005224	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	chr12	110874223	110874290	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	1	-1.2090
chr17	79270521	79270599	protein_coding	Eif2ak2	exon	ENSMUSG00000024079	ProperStrand	11	chr8	124128085	124128133	protein_coding	Zcchc14	exon	ENSMUSG00000061410	ProperStrand	22	3	-inf
chr2	131927224	131927250	protein_coding	Slc23a2	exon	ENSMUSG00000027340	ProperStrand	44	chr9	65728699	65728741	protein_coding	Trip4	exon	ENSMUSG00000032386	ProperStrand	6	1	-18.7556
chr15	101579957	101580047	SINE	B4A	B4	chr15B4A101579898	NonProperStrand	1	chr10	83877185	83877275	protein_coding	Nuak1	intron	ENSMUSG00000020032	NonProperStrand	3	1	-inf
chr2	154375039	154375057	protein_coding	Necab3	intron	ENSMUSG00000027489	ProperStrand	7	chr10	80640845	80640902	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-10.4925
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr2	125389949	125389966	protein_coding	Cep152	exon	ENSMUSG00000068394	ProperStrand	60	1	-8.5930
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	2	-4.3514
chr10	128006149	128006239	protein_coding	Erbb3	utr3	ENSMUSG00000018166	ProperStrand	49	chr16	23110893	23110989	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-2.9967
chr15	81110991	81111009	SINE	ID4	ID	chr15ID481110956	ProperStrand	272	chr12	112567379	112567411	protein_coding	Cdc42bpb	exon	ENSMUSG00000021279	ProperStrand	128	1	-8.7655
chr16	23110916	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	chr7	19886595	19886675	tRNA	tRNA86-SeCTCA	.	801874	ProperStrand	34	1	-0.8923
chr12	58072364	58072382	protein_coding	Slc25a21	intron	ENSMUSG00000035472	NonProperStrand	6	chr4	131908696	131908767	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.3738
chr11	78313939	78313956	protein_coding	Vtn	exon	ENSMUSG00000017344	ProperStrand	188	chr9	75246311	75246366	protein_coding	Mapk6	utr5	ENSMUSG00000042688	ProperStrand	25	1	-12.7942
chr12	86683628	86683673	protein_coding	Tmed10	utr3	ENSMUSG00000021248	ProperStrand	34	chr4	131908356	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-8.6236
chr9	14360103	14360203	protein_coding	Amotl1	exon	ENSMUSG00000013076	ProperStrand	72	chrX	34622906	34622975	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	10	-21.5160
chr12	75008966	75009015	protein_coding	Hif1a	utr5	ENSMUSG00000021109	ProperStrand	20	chr1	40053934	40053951	protein_coding	Map4k4	exon	ENSMUSG00000026074	ProperStrand	348	1	-12.0181
chr6	113067609	113069410	protein_coding	Setd5	exon	ENSMUSG00000034269	ProperStrand	162	chr17	24857727	24857807	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-0.8561
chr2	4829164	4829180	protein_coding	Sephs1	utr3	ENSMUSG00000026662	NonProperStrand	271	chr5	130707725	130707757	protein_coding	0610007L01Rik	exon	ENSMUSG00000053094	ProperStrand	39	1	-11.1592
chr14	122393461	122393480	protein_coding	Ubac2	exon	ENSMUSG00000041765	ProperStrand	25	chr7	116664809	116664899	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-4.1486
chr19	45225475	45225491	protein_coding	Tlx1	exon	ENSMUSG00000025215	NonProperStrand	12	chr8	32260396	32260423	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-7.8408
chr9	109975168	109985216	protein_coding	Mtap4	exon	ENSMUSG00000032479	ProperStrand	188	chr10	23505147	23505282	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-0.8344
chr7	134279836	134279916	protein_coding	Spn	exon	ENSMUSG00000051457	ProperStrand	9	chr3	68889122	68889212	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-6.9792
chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	chr5	121655097	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-2.3631
chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	chr12	110874224	110874290	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	1	-4.8851
chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	chr4	122968596	122968662	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-1.6010
chr17	95160910	95218243	Satellite	MMSAT4	Satellite	chr17MMSAT495216724	NonProperStrand	14	chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	1	-12.2310
chr12	111932236	111932274	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr17	66468411	66468427	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	1	-4.8648
chr10	94869957	94870016	protein_coding	Socs2	intron	ENSMUSG00000020027	ProperStrand	7	chr10	23505152	23505182	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-5.0629
chr2	8759556	8759573	LINE	Lx	L1	chr2Lx8759488	ProperStrand	36	chr4	131908383	131908447	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.2156
chr10	9892720	9892810	LINE	L1VL4	L1	chr10L1VL49892536	NonProperStrand	1	chr7	113664484	113664564	LINE	L1Md_T	L1	chr7L1Md_T113663801	NonProperStrand	1	1	-inf
chr5	108336363	108336487	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	chr3	95980284	95980411	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	13	-11.6061
chr17	25081282	25081343	protein_coding	Hn1l	utr3	ENSMUSG00000024165	ProperStrand	45	chr18	73693110	73693137	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-6.0897
chr14	59849695	59849716	protein_coding	Rcbtb1	intron	ENSMUSG00000035469	ProperStrand	39	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-6.0455
chr1	88252710	88252977	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chr17	24856655	24856735	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-1.1378
chr2	29019965	29020065	protein_coding	Setx	exon	ENSMUSG00000043535	ProperStrand	187	chr1	162965536	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.3999
chr7	147130892	147130929	protein_coding	Utf1	utr3	ENSMUSG00000047751	ProperStrand	67	chr17	35087894	35087939	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	2	-8.2236
chr7	53089954	53089976	protein_coding	Grin2d	intron	ENSMUSG00000002771	NonProperStrand	31	chr10	90324049	90324065	protein_coding	Anks1b	intron	ENSMUSG00000058589	NonProperStrand	230	1	-11.9523
chr5	147083177	147083252	protein_coding	Cdk8	exon	ENSMUSG00000029635	ProperStrand	19	chr11	62416604	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-7.4528
chr7	133707240	133707969	protein_coding	Eif3c	exon	ENSMUSG00000030738	ProperStrand	92	chr2	26493364	26493449	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	7	-20.0353
chr17	45707707	45708025	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr11	62418046	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	3	-1.4404
chr10	78080677	78080695	protein_coding	Olfr1357	utr5	ENSMUSG00000071185	ProperStrand	1	chr19	8800367	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-inf
chr11	77872091	77872191	protein_coding	Flot2	exon	ENSMUSG00000061981	ProperStrand	108	chr15	34370545	34370620	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-2.5022
chr5	66208506	66211599	protein_coding	N4bp2	exon	ENSMUSG00000037795	ProperStrand	30	chr8	14321802	14321820	protein_coding	Dlgap2	intron	ENSMUSG00000047495	ProperStrand	20	1	-16.9328
chr2	38280204	38280226	lincRNA	Gm13589	intron	ENSMUSG00000085950	NonProperStrand	31	chr16	23111374	23111444	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.2771
chr13	13575978	13575995	protein_coding	Nid1	exon	ENSMUSG00000005397	NonProperStrand	6	chr4	131865867	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-6.1051
chr9	120866947	120867758	protein_coding	Ctnnb1	exon	ENSMUSG00000006932	ProperStrand	214	chr10	23505152	23505261	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	10	-6.3095
chr10	22429098	22429188	protein_coding	Tbpl1	intron	ENSMUSG00000071359	ProperStrand	4	chr18	33954845	33954925	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-9.0265
chr15	77597977	77643504	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr18	35714155	35714255	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	3	-1.2936
chr6	54379743	54379760	lincRNA	9130019P16Rik	exon	ENSMUSG00000073067	ProperStrand	255	chr1	162967489	162967510	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-1.1252
chr18	35716298	35717043	lincRNA	Snhg4	exon	ENSMUSG00000090430	ProperStrand	270	chr9	65193983	65194051	protein_coding	Pdcd7	exon	ENSMUSG00000041837	ProperStrand	57	1	-10.4013
chr4	147965662	147965678	protein_coding	Srm	utr5	ENSMUSG00000006442	ProperStrand	19	chr9	64023677	64023769	protein_coding	Rpl4	intron	ENSMUSG00000032399	ProperStrand	608	1	-11.0081
chr12	87865704	87865722	SINE	RSINE1	B4	chr12RSINE187865630	ProperStrand	36	chr3	123210906	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.9411
chr4	21606097	21606114	protein_coding	Prdm13	exon	ENSMUSG00000040478	ProperStrand	51	chr16	23110911	23111005	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.0517
chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	chr4	138919613	138919680	protein_coding	C230096C10Rik	exon	ENSMUSG00000078517	ProperStrand	69	1	-9.2990
chr11	68887042	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	chr16	20684333	20684386	snoRNA	ENSMUSG00000077239_Snord66	.	ENSMUSG00000077239	ProperStrand	159	2	-4.2228
chr16	37384897	37384913	protein_coding	Stxbp5l	utr5	ENSMUSG00000022829	ProperStrand	332	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-2.0864
chr2	163904237	163904282	protein_coding	Stk4	intron	ENSMUSG00000018209	ProperStrand	20	chr18	48207177	48207265	protein_coding	Gm5506	exon	ENSMUSG00000059040	ProperStrand	105	1	-14.4201
chr7	136800631	136800649	SINE	RSINE1	B4	chr7RSINE1136800606	ProperStrand	216	chr11	62416575	62416598	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	1	-6.4255
chr11	60367980	60368047	protein_coding	Alkbh5	utr3	ENSMUSG00000042650	ProperStrand	203	chr11	68886937	68887027	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-1.9872
chr12	110888905	110888947	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr6	5110041	5110141	protein_coding	Ppp1r9a	utr3	ENSMUSG00000032827	ProperStrand	50	1	-9.0324
chr5	147646029	147646067	protein_coding	Rpl21	exon	ENSMUSG00000041453	ProperStrand	112	chr7	88489430	88489446	protein_coding	Rps17	intron	ENSMUSG00000061787	ProperStrand	105	1	-10.9355
chr1	58116010	58116028	protein_coding	Aox1	exon	ENSMUSG00000063558	ProperStrand	20	chr9	64022855	64022875	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-10.2454
chr2	93536045	93646268	protein_coding	Ext2	utr3	ENSMUSG00000027198	ProperStrand	49	chr16	23110829	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-5.5958
chr13	23646948	23647005	protein_coding	Hist1h1d	utr5	ENSMUSG00000052565	ProperStrand	78	chr2	26493366	26493433	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-3.2602
chr5	12383278	12383295	protein_coding	Sema3d	utr5	ENSMUSG00000040254	ProperStrand	5	chr1	102076758	102076794	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	1	-14.5943
chr7	13615529	13615711	protein_coding	Trim28	exon	ENSMUSG00000005566	ProperStrand	296	chr7	116663748	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	8	-7.3389
chr15	76009214	76009292	protein_coding	Plec	exon	ENSMUSG00000022565	ProperStrand	186	chr11	6428105	6428157	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.3417
chr3	108357255	108357358	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	chr11	69482376	69482425	snoRNA	ENSMUSG00000089542_snoU6-77	.	ENSMUSG00000089542	ProperStrand	138	1	-2.9961
chr11	120208563	120208663	protein_coding	Actg1	exon	ENSMUSG00000062825	ProperStrand	178	chr16	23110527	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-0.8606
chr19	46157800	46158029	protein_coding	Nolc1	exon	ENSMUSG00000015176	ProperStrand	53	chr10	23505152	23505252	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.4069
chr6	29106973	29107053	protein_coding-noncoding	Rbm28	utr3	ENSMUSG00000029701	ProperStrand	2	chrX	71517862	71517952	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	2	-inf
chr9	30235085	30235102	protein_coding	Snx19	exon	ENSMUSG00000031993	ProperStrand	353	chr6	90332372	90332486	protein_coding	Zxdc	exon	ENSMUSG00000034430	ProperStrand	10	5	-inf
chr7	54106402	54110464	protein_coding	Ldha	exon	ENSMUSG00000063229	ProperStrand	280	chr1	162966817	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	2	-5.6626
chr12	17552955	17553045	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr6	131330312	131330392	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	ProperStrand	408	1	-1.6731
chr5	24815421	24815466	protein_coding	Mll3	utr5	ENSMUSG00000038056	ProperStrand	31	chr17	13112564	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-5.8680
chr4	131908357	131908463	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr11	68886926	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	5	-1.5695
chr13	63612936	63612952	protein_coding	Ptch1	exon	ENSMUSG00000021466	NonProperStrand	118	chr3	123210923	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.0725
chr11	69481334	69481434	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	chr4	131866642	131866676	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	3	-1.3266
chr4	56889346	56889415	protein_coding	D730040F13Rik	utr3	ENSMUSG00000055296	ProperStrand	48	chr4	131908236	131908292	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.7522
chr3	97902092	97902129	protein_coding	Notch2	exon	ENSMUSG00000027878	ProperStrand	86	chr2	130103804	130103822	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-7.7524
chr15	76175069	76175131	protein_coding	Cyc1	exon	ENSMUSG00000022551	ProperStrand	47	chr8	87849256	87849272	protein_coding	Mylk3	utr3	ENSMUSG00000031698	ProperStrand	2	1	-inf
chr17	34021779	34021862	protein_coding	Kifc1	exon	ENSMUSG00000079553	ProperStrand	47	chr10	23505152	23505210	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-6.5006
chr13	38064360	38064377	protein_coding	Ssr1	utr3	ENSMUSG00000021427	ProperStrand	65	chr11	68886932	68887022	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	18	-20.3501
chr10	80860700	80860717	protein_coding	Nfic	utr3	ENSMUSG00000055053	ProperStrand	69	chr16	23111720	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	6	-11.1532
chr11	83258967	83259019	protein_coding	Mmp28	intron	ENSMUSG00000020682	NonProperStrand	6	chr1	89673729	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	4	-18.8060
chr5	28544596	28544612	protein_coding	Cnpy1	intron	ENSMUSG00000044681	ProperStrand	15	chr4	131908236	131908331	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.7937
chr11	55296195	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	chr8	129468745	129468871	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	9	-2.5336
chr15	76936088	76944040	protein_coding	Rbfox2	exon	ENSMUSG00000033565	ProperStrand	55	chrX	71517821	71517907	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	3	-15.2606
chr1	58809467	58809485	protein_coding	Cflar	exon	ENSMUSG00000026031	ProperStrand	10	chr10	90432659	90432680	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	1	-14.2817
chr5	74489249	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr8	72351634	72351724	protein_coding	Lpar2	utr3	ENSMUSG00000031861	ProperStrand	44	1	-6.2327
chr2	25920077	25920093	protein_coding	Nacc2	exon	ENSMUSG00000026932	NonProperStrand	15	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-13.5874
chr8	81332074	81332123	protein_coding	Lsm6	utr3	ENSMUSG00000031683	ProperStrand	13	chr17	26360448	26360538	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	1	-13.1474
chr14	51427291	51427349	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr11	116535922	116535982	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	1	-0.7315
chr13	38592548	38592609	protein_coding	Txndc5	utr3	ENSMUSG00000038991	ProperStrand	48	chr11	77996560	77996621	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	2	-10.5704
chr11	119142020	119142148	protein_coding	Gaa	intron	ENSMUSG00000025579	ProperStrand	149	chr16	23111750	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-1.4233
chr9	78328140	78328180	protein_coding	Eef1a1	exon	ENSMUSG00000037742	NonProperStrand	16	chr11	69483136	69483190	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	NonProperStrand	35	1	-17.1027
chr5	77342910	77342967	protein_coding	Ppat	utr3	ENSMUSG00000029246	ProperStrand	55	chr16	23111702	23111792	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.0428
chr11	107249677	107249777	protein_coding	Pitpnc1	intron	ENSMUSG00000040430	ProperStrand	46	chr11	77996560	77996584	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-6.6179
chr17	24646726	24646904	protein_coding	Traf7	exon	ENSMUSG00000052752	ProperStrand	28	chr4	131865391	131865471	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	8	-inf
chr4	118806999	118808357	protein_coding	Slc2a1	exon	ENSMUSG00000028645	ProperStrand	361	chr19	6058470	6058548	protein_coding	Fau	exon	ENSMUSG00000038274	ProperStrand	64	1	-9.5886
chr2	84441324	84441427	protein_coding	Ctnnd1	utr3	ENSMUSG00000034101	ProperStrand	26	chr10	23505150	23505221	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-4.5156
chr15	88987653	88987874	protein_coding	Plxnb2	exon	ENSMUSG00000036606	ProperStrand	119	chr11	69481371	69481463	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-2.0235
chr19	5841169	5841230	non_coding	Neat1	.	ENSMUSG00000092274	ProperStrand	63	chr4	131908356	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.3492
chr14	45949538	45949554	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	chr14	76247754	76247805	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-1.3006
chr9	96233482	96233506	protein_coding	Atp1b3	utr3	ENSMUSG00000032412	ProperStrand	20	chr9	120038468	120038529	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-8.4791
chr10	79359629	79359671	protein_coding	Med16	exon	ENSMUSG00000013833	ProperStrand	13	chr10	117210175	117210340	protein_coding	Nup107	exon	ENSMUSG00000052798	ProperStrand	14	2	-inf
chr11	75578849	75578939	protein_coding	Ywhae	utr3	ENSMUSG00000020849	ProperStrand	176	chr8	74988413	74990356	protein_coding	Cherp	exon	ENSMUSG00000052488	ProperStrand	43	1	-11.8267
chr11	98856559	98856593	protein_coding	Top2a	exon	ENSMUSG00000020914	ProperStrand	324	chr17	85482653	85489599	protein_coding	Prepl	utr5	ENSMUSG00000024127	ProperStrand	106	1	-8.7937
chr17	13184995	13185013	protein_coding	Wtap	utr5	ENSMUSG00000060475	ProperStrand	119	chr4	131865940	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.6914
chr16	21221528	21221754	protein_coding	Ephb3	exon	ENSMUSG00000005958	ProperStrand	23	chr7	118219575	118219648	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-6.0392
chr14	119505136	119505153	lincRNA	Gm16835	intron	ENSMUSG00000087479	ProperStrand	2	chr4	3762228	3762291	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	1	-16.9320
chr4	131908356	131908492	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr19	8799839	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	5	-3.0277
chr1	129701068	129701152	protein_coding	Ccnt2	utr3	ENSMUSG00000026349	ProperStrand	34	chr10	110918549	110918639	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-4.5188
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr5	108336374	108336411	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-1.0431
chr9	56266647	56266665	protein_coding	Hmg20a	utr5	ENSMUSG00000032329	ProperStrand	87	chr11	62416575	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-7.4062
chr6	134836909	134837702	protein_coding	Gpr19	utr5	ENSMUSG00000032641	ProperStrand	27	chr7	117166811	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-6.3852
chr9	15068093	15068151	protein_coding	Med17	exon	ENSMUSG00000031935	ProperStrand	135	chr15	79908956	79908985	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	2	-6.5904
chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr13	23528224	23528284	tRNA	tRNA103-LysCTT	.	511208	ProperStrand	180	2	-0.9511
chr1	162968214	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	chr11	6520321	6520421	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	1	-1.6759
chr12	100032819	100034739	protein_coding	Eml5	exon	ENSMUSG00000051166	ProperStrand	26	chr11	69483136	69483191	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.9646
chrX	40944841	40944857	protein_coding	Gm362	exon	ENSMUSG00000078320	ProperStrand	129	chr15	79908959	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-4.0048
chrX	152009278	152009294	protein_coding	Ptchd1	exon	ENSMUSG00000041552	NonProperStrand	294	chr9	123169581	123169630	protein_coding	Tmem158	exon	ENSMUSG00000054871	ProperStrand	8	2	-19.1258
chr8	73032385	73033242	protein_coding	2810422J05Rik	exon	ENSMUSG00000055553	ProperStrand	171	chr7	117166773	117166853	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-2.8722
chrX	71518399	71518435	protein_coding	Rpl10	utr3	ENSMUSG00000008682	ProperStrand	71	chr12	88488443	88496424	protein_coding	Pomt2	exon	ENSMUSG00000034126	NonProperStrand	331	1	-9.5534
chr12	13400201	13400291	protein_coding	Nbas	exon	ENSMUSG00000020576	ProperStrand	35	chr12	106269479	106269559	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-5.1779
chr9	119536351	119539207	protein_coding	Scn10a	exon	ENSMUSG00000034533	ProperStrand	37	chr14	76247752	76247776	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-5.1019
chr16	33380666	33380682	lincRNA	1700007L15Rik	exon	ENSMUSG00000090918	ProperStrand	2	chr4	140278873	140278932	protein_coding	Rcc2	utr3	ENSMUSG00000040945	ProperStrand	228	1	-18.3799
chr4	120075587	120075667	LINE	Lx	L1	chr4Lx120074699	NonProperStrand	1	chr4	120076009	120076099	LINE	Lx	L1	chr4Lx120075998	ProperStrand	1	1	-inf
chr9	110844927	110845136	protein_coding	Tdgf1	exon	ENSMUSG00000032494	ProperStrand	218	chr1	88247743	88247772	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-2.7031
chr8	73296601	73296691	protein_coding-noncoding	Pik3r2	utr3	ENSMUSG00000031834	NonProperStrand	1	chr8	73296729	73296819	protein_coding	Pik3r2	exon	ENSMUSG00000031834	NonProperStrand	2	1	-inf
chr9	94773539	94773558	protein_coding	Slc9a9	intron	ENSMUSG00000031129	NonProperStrand	7	chr2	144087376	144087462	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-10.9474
chr19	8799583	8799644	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	chr16	23109027	23109075	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	3	-3.9421
chr1	54361817	54371000	protein_coding	Ccdc150	exon	ENSMUSG00000025983	ProperStrand	56	chr3	68889026	68889126	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	2	-5.7819
chr13	103941952	103941971	protein_coding	Mast4	intron	ENSMUSG00000034751	NonProperStrand	12	chr17	13115655	13115712	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	NonProperStrand	2	1	-inf
chr1	88247742	88247783	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	chr2	144091716	144091816	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	ProperStrand	549	1	-1.2516
chr14	29145002	29145092	protein_coding	Erc2	intron	ENSMUSG00000040640	ProperStrand	31	chr4	131908238	131908318	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.4690
chrX	70237450	70237471	miRNA	Mir2137	.	ENSMUSG00000089357	ProperStrand	50	chr5	108334225	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	2	-8.5148
chr16	23111809	23111833	protein_coding	Eif4a2	intron	ENSMUSG00000022884	ProperStrand	356	chr5	121655016	121655093	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-1.7929
chr4	153532459	153532520	protein_coding	Tprgl	utr3	ENSMUSG00000029030	ProperStrand	50	chr6	102298537	102298559	protein_coding	Cntn3	intron	ENSMUSG00000030075	NonProperStrand	13	1	-16.7536
chr2	112993085	112993103	protein_coding	Ryr3	intron	ENSMUSG00000057378	NonProperStrand	24	chr10	39978276	39978366	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	2	-11.7274
chr10	118645376	118645430	protein_coding	Cand1	exon	ENSMUSG00000020114	ProperStrand	76	chr9	15119646	15119736	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.2285
chr4	46550250	46550330	protein_coding	Coro2a	utr3	ENSMUSG00000028337	ProperStrand	3	chr19	8963027	8963117	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-8.3179
chr6	71363272	71364814	protein_coding	Rmnd5a	exon	ENSMUSG00000002222	ProperStrand	38	chr13	112540780	112541440	protein_coding	Map3k1	exon	ENSMUSG00000021754	ProperStrand	113	1	-12.9668
chr2	26494762	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	chr11	97631139	97631177	tRNA	tRNA1444-CysGCA	.	1501786	ProperStrand	91	1	-2.3800
chr13	55635562	55635615	protein_coding	Ddx41	exon	ENSMUSG00000021494	ProperStrand	45	chr9	121823892	121823908	protein_coding	Cyp8b1	exon	ENSMUSG00000050445	NonProperStrand	101	1	-12.8475
chr7	136800631	136800649	SINE	RSINE1	B4	chr7RSINE1136800606	ProperStrand	216	chr4	43456325	43456392	protein_coding	Tesk1	exon	ENSMUSG00000028458	ProperStrand	5	1	-15.8811
chr19	30139987	30140095	protein_coding	Uhrf2	intron	ENSMUSG00000024817	ProperStrand	40	chr16	23110552	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	5	-13.9761
chr11	4956158	4956174	protein_coding	Gas2l1	utr3	ENSMUSG00000034201	ProperStrand	33	chr1	162966812	162966852	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-7.4495
chr9	52959728	52959787	protein_coding	Ddx10	intron	ENSMUSG00000053289	ProperStrand	40	chr1	63225274	63225322	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	1	-9.6517
chr1	193178908	193180258	protein_coding	Ppp2r5a	exon	ENSMUSG00000026626	ProperStrand	16	chr16	23110472	23110552	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	6	-19.3807
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr10	30530946	30531020	tRNA	tRNA81-GluCTC	.	22544	ProperStrand	154	1	-7.0264
chr5	110046916	110047006	LINE	L1_Mur2	L1	chr5L1_Mur2110045376	ProperStrand	1	chr4	118951756	118954206	protein_coding	Ybx1	exon	ENSMUSG00000028639	ProperStrand	171	1	-inf
chr8	26629874	26642784	protein_coding	Fgfr1	utr5	ENSMUSG00000091895	ProperStrand	16	chr12	17552966	17553046	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-7.7239
chr9	114458819	114458846	protein_coding	Trim71	intron	ENSMUSG00000079259	ProperStrand	162	chr7	117189974	117190064	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-1.6558
chr2	59637685	59637754	protein_coding	Tanc1	exon	ENSMUSG00000035168	ProperStrand	80	chr8	73419657	73419757	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.6221
chr2	121176333	121176349	protein_coding	Ppip5k1	exon	ENSMUSG00000033526	ProperStrand	85	chr16	23111705	23111722	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.3785
chr11	19963088	19963121	protein_coding	Actr2	utr3	ENSMUSG00000020152	ProperStrand	72	chr11	69483136	69483188	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.1448
chr19	9683057	9683085	Satellite	MMSAT4	Satellite	chr19MMSAT49681870	ProperStrand	4	chr4	131865913	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-17.5900
chr11	99080617	99080695	protein_coding	Smarce1	exon	ENSMUSG00000037935	ProperStrand	38	chr2	26493395	26493485	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-4.6088
chr18	57400307	57400324	protein_coding	Megf10	exon	ENSMUSG00000024593	ProperStrand	143	chr7	5026814	5027141	protein_coding	U2af2	exon	ENSMUSG00000030435	ProperStrand	103	1	-10.4846
chr14	8763343	8763541	protein_coding	Flnb	exon	ENSMUSG00000025278	ProperStrand	124	chr18	35714183	35714263	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-2.1737
chr4	25794120	25794210	LINE	L1Md_F3	L1	chr4L1Md_F325794125	ProperStrand	1	chrX	16264111	16264201	protein_coding	Maoa	utr3	ENSMUSG00000025037	ProperStrand	17	1	-inf
chr15	84144642	84144732	protein_coding	Parvb	utr3	ENSMUSG00000022438	ProperStrand	127	chr2	59680967	59681047	protein_coding	Tanc1	exon	ENSMUSG00000035168	ProperStrand	80	1	-11.2296
chr18	31603255	31603271	lincRNA	Gm16871	exon	ENSMUSG00000085520	ProperStrand	1	chr9	15118322	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-inf
chr5	92880378	92880426	protein_coding	Scarb2	exon	ENSMUSG00000029426	ProperStrand	30	chr19	56876391	56881470	protein_coding	A630007B06Rik	exon	ENSMUSG00000035173	ProperStrand	11	1	-17.9580
chr4	124736325	124736344	protein_coding	Dnali1	exon	ENSMUSG00000042707	ProperStrand	45	chr16	23111690	23111754	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.3757
chr4	116827792	116827829	snoRNA	ENSMUSG00000064751_SNORD46	.	ENSMUSG00000064751	ProperStrand	132	chr5	130300443	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	4	-5.4980
chr3	107910994	107911084	protein_coding	Gnai3	utr3	ENSMUSG00000000001	ProperStrand	48	chr11	69483182	69483262	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.8373
chr8	86246867	86246927	protein_coding	Ddx39	exon	ENSMUSG00000005481	ProperStrand	24	chr4	131908689	131908742	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-4.7206
chr1	75471555	75471588	protein_coding	Chpf	exon	ENSMUSG00000032997	ProperStrand	12	chr5	108336431	108336495	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-13.0371
chr14	119282716	119282753	protein_coding	Dzip1	exon	ENSMUSG00000042156	ProperStrand	7	chr11	116938557	116938647	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-10.5542
chr6	70794801	70794819	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chr6	71832605	71832687	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-3.8070
chr11	49031478	49031494	protein_coding	Zfp62	utr3	ENSMUSG00000046311	ProperStrand	2	chr2	26494808	26494840	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-10.3719
chr9	88448088	88448178	misc_RNA	CT025673.1	.	ENSMUSG00000092805	ProperStrand	24	chr2	91105736	91105777	protein_coding	Arfgap2	exon	ENSMUSG00000027255	ProperStrand	7	1	-inf
chr2	83619176	83622111	protein_coding	Itgav	exon	ENSMUSG00000027087	ProperStrand	59	chr16	23111694	23111784	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.9299
chr4	130305522	130305622	protein_coding	Pum1	intron	ENSMUSG00000028580	ProperStrand	131	chr2	158182156	158182187	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-3.5260
chr4	130305549	130305620	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	chr18	33954849	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-0.8364
chr10	107800717	107800820	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	3	-2.7066
chrX	11635848	11635865	protein_coding	Bcor	exon	ENSMUSG00000040363	NonProperStrand	293	chr2	158182208	158182276	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-2.1228
chr14	104865762	104865778	protein_coding	Pou4f1	exon	ENSMUSG00000048349	NonProperStrand	1	chr17	13115703	13115760	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	1	-inf
chr11	12153539	12153584	protein_coding	Cobl	exon	ENSMUSG00000020173	ProperStrand	133	chr2	168426891	168426910	protein_coding	Nfatc2	intron	ENSMUSG00000027544	NonProperStrand	49	2	-19.8710
chr4	117907665	117908200	protein_coding	Ptprf	exon	ENSMUSG00000033295	ProperStrand	337	chr11	69481351	69481431	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	6	-6.0315
chr14	55087316	55087416	protein_coding	Lrp10	exon	ENSMUSG00000022175	ProperStrand	19	chr5	76659330	76659347	protein_coding	Clock	exon	ENSMUSG00000029238	NonProperStrand	64	1	-15.5219
chr10	80860700	80860717	protein_coding	Nfic	utr3	ENSMUSG00000055053	ProperStrand	69	chr5	121655015	121655095	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.4890
chr15	96119987	96120003	protein_coding	Arid2	intron	ENSMUSG00000033237	NonProperStrand	13	chr8	83538226	83538271	protein_coding	Usp38	exon	ENSMUSG00000038250	ProperStrand	26	1	-18.2043
chr10	105278600	105278616	protein_coding	Ccdc59	exon	ENSMUSG00000019897	ProperStrand	21	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-11.0511
chr1	108069885	108069901	protein_coding	Phlpp1	exon	ENSMUSG00000044340	ProperStrand	67	chr5	108334194	108334289	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-4.6078
chr8	126477132	126477177	protein_coding	Abcb10	utr3	ENSMUSG00000031974	ProperStrand	13	chr7	116663634	116663724	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-5.3924
chr5	19412922	19412939	protein_coding	Magi2	intron	ENSMUSG00000040003	ProperStrand	49	chr19	8963026	8963111	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.6199
chr4	133261476	133261492	protein_coding	Arid1a	intron	ENSMUSG00000007880	NonProperStrand	7	chr17	35087897	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-9.5701
chr17	81344133	81344150	protein_coding	Tmem178	exon	ENSMUSG00000024245	ProperStrand	67	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-7.0147
chr2	125548901	125548917	protein_coding	Shc4	exon	ENSMUSG00000035109	ProperStrand	19	chr7	34992752	34992774	protein_coding	Gpi1	exon	ENSMUSG00000036427	ProperStrand	288	1	-12.5026
chr16	90223114	90224642	protein_coding	Sod1	exon	ENSMUSG00000022982	NonProperStrand	1	chr16	57391633	57391726	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	1	-inf
chr8	26238670	26238687	LTR	MMERGLN-int	ERV1	chr8MMERGLN-int26233583	NonProperStrand	1	chr7	52309977	52309993	protein_coding	Prrg2	exon	ENSMUSG00000007837	NonProperStrand	281	1	-inf
chr7	16858757	16858774	protein_coding	Prr24	utr5	ENSMUSG00000091811	ProperStrand	8	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.4974
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr11	6428100	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-0.8335
chr3	138590469	138590548	protein_coding	Rap1gds1	utr3	ENSMUSG00000028149	ProperStrand	16	chr16	23110900	23110990	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-3.6512
chr5	119188901	119188991	protein_coding	Med13l	exon	ENSMUSG00000018076	ProperStrand	226	chr9	15119297	15119377	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	5	-12.0268
chr1	63782095	63782130	protein_coding	Fastkd2	exon	ENSMUSG00000025962	ProperStrand	2	chr16	23110917	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr16	20499037	20499101	protein_coding	Eif2b5	exon	ENSMUSG00000003235	ProperStrand	38	chr4	142940005	142940025	protein_coding	Lrrc38	utr5	ENSMUSG00000028584	ProperStrand	9	2	-19.6071
chr19	42194678	42194694	protein_coding	Pi4k2a	utr3	ENSMUSG00000025178	ProperStrand	23	chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	1	-14.4984
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	4820972	4820990	protein_coding	Thoc5	intron	ENSMUSG00000034274	ProperStrand	325	2	-2.8417
chr7	28557761	28557846	LTR	MYSERV-int	ERVK	chr7MYSERV-int28557691	NonProperStrand	3	chr16	34357476	34360911	protein_coding	Kalrn	exon	ENSMUSG00000061751	NonProperStrand	52	3	-inf
chr10	19981492	19981509	protein_coding	Mtap7	intron	ENSMUSG00000019996	ProperStrand	43	chr18	75161154	75161173	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	1	-9.6916
chr14	76247911	76247936	protein_coding	Tpt1	utr3	ENSMUSG00000060126	ProperStrand	236	chr12	112779226	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	3	-6.1025
chr2	25563070	25563086	antisense	A230005M16Rik	.	ENSMUSG00000087612	ProperStrand	103	chr7	112630313	112630330	protein_coding	Prkcdbp	exon	ENSMUSG00000037060	ProperStrand	8	1	-16.3403
chr10	79756514	79756614	protein_coding	Rps15	exon	ENSMUSG00000063457	ProperStrand	119	chr1	63225618	63225654	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-5.3238
chr9	82799283	82799300	protein_coding	Phip	exon	ENSMUSG00000032253	ProperStrand	43	chr4	131865866	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.3073
chr1	172993122	172993139	protein_coding	Fcgr3	intron	ENSMUSG00000059498	ProperStrand	44	chr4	131908713	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.6723
chr7	6346949	6347017	protein_coding	Zfp28	exon	ENSMUSG00000062861	ProperStrand	1	chr12	55797769	55797836	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	1	-inf
chr11	80965641	80965658	protein_coding	Accn1	exon	ENSMUSG00000020704	NonProperStrand	228	chr18	25244103	25248536	protein_coding	Fhod3	exon	ENSMUSG00000034295	ProperStrand	23	1	-12.5786
chr19	46022236	46022252	protein_coding	9130011E15Rik	intron	ENSMUSG00000039901	ProperStrand	129	chr7	117189862	117189943	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-4.7190
chr6	120467088	120468467	protein_coding	Cecr5	exon	ENSMUSG00000058979	ProperStrand	97	chr11	62416951	62416971	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-5.1050
chr9	69950719	69958080	protein_coding	Fam81a	exon	ENSMUSG00000032224	ProperStrand	59	chr10	23505153	23505243	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-5.4939
chr1	120578096	120578134	protein_coding	Tfcp2l1	utr3	ENSMUSG00000026380	ProperStrand	158	chr5	108334254	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-3.0157
chr4	48972796	48972815	lincRNA	Gm12436	intron	ENSMUSG00000084787	NonProperStrand	2	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-inf
chr9	106091099	106091143	protein_coding	Wdr82	utr3	ENSMUSG00000020257	ProperStrand	34	chr8	26933722	26937649	protein_coding	Ash2l	exon	ENSMUSG00000031575	ProperStrand	113	3	-20.9731
chr17	66468411	66468427	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	chr17	35087909	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-2.0622
chr13	98016485	98016581	protein_coding	Enc1	exon	ENSMUSG00000041773	ProperStrand	24	chr2	26768383	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	3	-16.7590
chrX	164292836	164292852	protein_coding	Frmpd4	utr5	ENSMUSG00000049176	ProperStrand	12	chr2	22444734	22444817	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-11.0498
chr15	82980116	82980225	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr1	88252838	88252864	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	2	-2.1992
chr10	80289592	80289625	protein_coding	Oaz1	exon	ENSMUSG00000035242	ProperStrand	49	chr2	26493405	26493474	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-4.1229
chr8	74985430	74985487	protein_coding	Cherp	exon	ENSMUSG00000052488	ProperStrand	43	chr11	68886928	68887018	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-4.7813
chr16	84846297	84846379	protein_coding	Gabpa	utr5	ENSMUSG00000008976	ProperStrand	38	chr19	8800377	8800467	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-4.3894
chr9	121823892	121823908	protein_coding	Cyp8b1	exon	ENSMUSG00000050445	NonProperStrand	101	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-10.6393
chr7	107128774	107128803	protein_coding	Rnf169	exon	ENSMUSG00000058761	ProperStrand	31	chr7	19479190	19479291	protein_coding	Ccdc61	exon	ENSMUSG00000074358	ProperStrand	27	1	-16.2115
chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	chr7	52381718	52381759	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	2	-4.6459
chr17	35972937	35972978	protein_coding	Tubb5	exon	ENSMUSG00000001525	ProperStrand	624	chr13	63612936	63612952	protein_coding	Ptch1	exon	ENSMUSG00000021466	NonProperStrand	118	1	-7.2791
chr2	158182156	158182246	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	chr7	51505224	51505304	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	1	-0.7391
chr4	134733397	134733415	protein_coding	Runx3	utr3	ENSMUSG00000070691	ProperStrand	17	chr19	8800355	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-5.9706
chr2	180639349	180639365	protein_coding	Ythdf1	utr3	ENSMUSG00000038848	NonProperStrand	3	chr9	15118325	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-16.2372
chr15	102009427	102009456	protein_coding	Csad	exon	ENSMUSG00000023044	ProperStrand	14	chr18	35716810	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-8.1072
chr9	119444602	119444619	protein_coding	Scn5a	intron	ENSMUSG00000032511	ProperStrand	19	chr7	116663681	116663710	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.6387
chr11	69732720	69732810	protein_coding	Eif5a	exon	ENSMUSG00000078812	ProperStrand	164	chr2	158182210	158182290	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	7	-19.7086
chr10	62285368	62285389	protein_coding	Tet1	exon	ENSMUSG00000047146	ProperStrand	286	chr7	119934377	119934428	protein_coding	Tead1	intron	ENSMUSG00000055320	ProperStrand	217	1	-7.6153
chr11	98948890	98948908	protein_coding	Tns4	intron	ENSMUSG00000017607	ProperStrand	2	chr2	158182210	158182279	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-12.4042
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr15	84276667	84276684	protein_coding	1810041L15Rik	intron	ENSMUSG00000062760	ProperStrand	1	1	-inf
chr5	140736792	140736882	protein_coding	Mad1l1	intron	ENSMUSG00000029554	ProperStrand	69	chr9	109988821	109989105	protein_coding	Dhx30	exon	ENSMUSG00000032480	ProperStrand	29	2	-inf
chr19	24171108	24172496	protein_coding	Tjp2	exon	ENSMUSG00000024812	ProperStrand	63	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-7.6300
chr2	90235285	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	120709244	120712786	protein_coding	Tbc1d30	exon	ENSMUSG00000052302	ProperStrand	233	2	-3.6655
chr17	24837719	24837864	protein_coding	Tbl3	exon	ENSMUSG00000040688	ProperStrand	42	chrX	34622906	34622962	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-3.8283
chr11	94504613	94504633	protein_coding	Lrrc59	exon	ENSMUSG00000020869	ProperStrand	115	chr4	85016349	85016365	protein_coding	Sh3gl2	intron	ENSMUSG00000028488	NonProperStrand	313	1	-8.6997
chr18	10052132	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	1	-4.8237
chr11	97546405	97546421	protein_coding	Mllt6	utr3	ENSMUSG00000038437	ProperStrand	110	chr11	62416977	62417014	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-4.8624
chr8	113576370	113576403	protein_coding	Aars	exon	ENSMUSG00000031960	ProperStrand	355	chr2	130101986	130102056	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-2.1089
chrX	71268736	71268752	protein_coding	Irak1	exon	ENSMUSG00000031392	NonProperStrand	18	chr14	31827479	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-9.3721
chr5	65780765	65780824	protein_coding	Rpl9	exon	ENSMUSG00000047215	ProperStrand	113	chr15	79913288	79913352	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	3	-6.5073
chr11	95820423	95820467	protein_coding	Igf2bp1	utr3	ENSMUSG00000013415	ProperStrand	140	chr7	86286583	86286670	protein_coding	Mfge8	exon	ENSMUSG00000030605	ProperStrand	73	1	-11.2180
chr11	58792145	58794821	protein_coding	Trim11	exon	ENSMUSG00000020455	ProperStrand	43	chr12	17552981	17553071	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-5.7404
chr9	24549621	24549661	protein_coding	Tbx20	intron	ENSMUSG00000031965	NonProperStrand	110	chr7	67125779	67125828	snoRNA	ENSMUSG00000089375_Snord107	.	ENSMUSG00000089375	ProperStrand	451	3	-17.9025
chr2	151331120	151332004	protein_coding	Nsfl1c	exon	ENSMUSG00000027455	ProperStrand	6	chr7	117189994	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-7.9273
chr2	160698759	160698776	sense_intronic	Gm16751	.	ENSMUSG00000085303	ProperStrand	7	chr18	75161533	75161596	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-11.6134
chr11	70273821	70273911	protein_coding	Zmynd15	utr5	ENSMUSG00000040829	NonProperStrand	3	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-11.5227
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr17	56753177	56753304	protein_coding	Rpl36	intron	ENSMUSG00000057863	ProperStrand	62	1	-6.3043
chr19	8798740	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	chr4	131866613	131866676	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	3	-3.6518
chr12	70397744	70397769	protein_coding	Klhdc2	utr5	ENSMUSG00000020978	ProperStrand	13	chr7	71506862	71506878	protein_coding	Fan1	exon	ENSMUSG00000033458	NonProperStrand	4	1	-20.8300
chr13	64348616	64349718	protein_coding	Cdc14b	exon	ENSMUSG00000033102	NonProperStrand	9	chr4	131865429	131865458	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-7.7817
chr11	14961829	14961849	LINE	Lx	L1	chr11Lx14961726	ProperStrand	93	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-5.0135
chr1	149930973	149930992	LTR	RLTR45	ERVK	chr1RLTR45149930739	NonProperStrand	1	chr2	26493365	26493475	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-inf
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr11	97642952	97643077	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	13	-3.7256
chr9	114422488	114422527	protein_coding	Trim71	exon	ENSMUSG00000079259	ProperStrand	162	chr5	108334223	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-2.9713
chr14	72301755	72301771	SINE	B4	B4	chr14B472301692	NonProperStrand	99	chr1	115800685	115800710	lincRNA	9330185C12Rik	intron	ENSMUSG00000086520	ProperStrand	45	1	-12.8891
chr11	104197639	104197870	protein_coding	1700081L11Rik	exon	ENSMUSG00000018412	ProperStrand	73	chr9	120039268	120039284	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	1	-9.1302
chr1	84728286	84728323	protein_coding	Trip12	exon	ENSMUSG00000026219	ProperStrand	248	chr4	131865417	131865507	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-1.5624
chr11	88790625	88791577	protein_coding	Scpep1	exon	ENSMUSG00000000278	ProperStrand	54	chr16	4213304	4213321	protein_coding	Crebbp	utr5	ENSMUSG00000022521	ProperStrand	56	1	-13.6630
chr7	118214876	118214985	protein_coding	Eif4g2	utr3	ENSMUSG00000005610	ProperStrand	134	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-6.5626
chr14	56389353	56390228	protein_coding	Adcy4	exon	ENSMUSG00000022220	ProperStrand	29	chr1	162965529	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.6451
chr2	37292258	37292274	protein_coding	Zbtb26	exon	ENSMUSG00000050714	ProperStrand	4	chr7	149170855	149171339	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	1	-16.9785
chr2	28324355	28324372	protein_coding	Mrps2	exon	ENSMUSG00000035772	NonProperStrand	47	chr17	35089181	35089233	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-5.9647
chr5	74489202	74489292	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr18	60936597	60936659	protein_coding	Rps14	exon	ENSMUSG00000024608	ProperStrand	154	4	-12.4629
chr17	23958167	23958538	protein_coding	Srrm2	utr3	ENSMUSG00000039218	ProperStrand	521	chr11	69481337	69481480	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	3	-1.2022
chr2	177713146	177713236	LINE	L1Md_A	L1	chr2L1Md_A177713138	ProperStrand	1	chr9	19462388	19462468	LINE	L1Md_A	L1	chr9L1Md_A19461964	ProperStrand	81	1	-inf
chr17	35299507	35299641	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	chr13	96100591	96100693	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	2	-1.2306
chr9	30976474	30978039	protein_coding	Aplp2	exon	ENSMUSG00000031996	ProperStrand	172	chr9	15118332	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-1.6767
chr1	87804525	87804557	protein_coding	Itm2c	utr3	ENSMUSG00000026223	ProperStrand	21	chrX	108773682	108773699	protein_coding	Hdx	exon	ENSMUSG00000034551	NonProperStrand	5	1	-19.3637
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr9	47347777	47347795	protein_coding	Cadm1	intron	ENSMUSG00000032076	ProperStrand	77	1	-7.2980
mmu-miR-2137	0	15	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	chr9	21080579	21080614	protein_coding	Kri1	exon	ENSMUSG00000035047	ProperStrand	10	1	-15.2145
chr9	22044548	22044638	protein_coding	Zfp809	intron	ENSMUSG00000057982	ProperStrand	10	chr16	23110911	23110991	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.7978
chr11	120678571	120678807	protein_coding	Fasn	exon	ENSMUSG00000025153	ProperStrand	298	chr9	15119659	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-1.7285
chr2	146125209	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	chr11	77996557	77996619	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	2	-6.6092
chr9	62992379	62992395	protein_coding	Skor1	exon	ENSMUSG00000022245	NonProperStrand	70	chr11	55296208	55296284	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-5.8766
chr11	74537023	74537039	protein_coding	Pafah1b1	utr5	ENSMUSG00000020745	NonProperStrand	2	chr2	158182156	158182280	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-12.4042
chr5	116313009	116313034	protein_coding	Cit	exon	ENSMUSG00000029516	ProperStrand	45	chr14	76247741	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-4.7221
chr12	8505203	8505293	protein_coding	Rhob	utr3	ENSMUSG00000054364	ProperStrand	10	chr10	110918555	110918635	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-6.9682
chr5	130745054	130745125	protein_coding	Tyw1	exon	ENSMUSG00000056310	ProperStrand	32	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-8.2414
chr8	116897372	116897389	protein_coding	Vat1l	utr3	ENSMUSG00000046844	NonProperStrand	7	chr16	23111384	23111413	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-5.0992
chr11	54753218	54754251	protein_coding	Tnip1	exon	ENSMUSG00000020400	ProperStrand	52	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-5.4907
chr13	41104897	41106624	protein_coding	Pak1ip1	exon	ENSMUSG00000038683	ProperStrand	49	chr18	35714205	35714285	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-3.8183
chr11	100414998	100415014	protein_coding	Ttc25	exon	ENSMUSG00000006784	NonProperStrand	119	chr12	29320466	29320485	protein_coding	Rps7	exon	ENSMUSG00000061477	ProperStrand	129	1	-10.4016
chr17	24607375	24607393	Simple_repeat	(CGG)n	Simple_repeat	chr17(CGG)n24607354	ProperStrand	8	chr7	116663711	116663763	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-6.3908
chr7	134404068	134404147	protein_coding	Dctpp1	utr5	ENSMUSG00000042462	ProperStrand	14	chr16	23111691	23111781	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	6	-inf
chr2	26767059	26767580	protein_coding	Rpl7a	exon	ENSMUSG00000062647	ProperStrand	234	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	3	-6.9346
chr8	124328091	124328168	protein_coding	Klhdc4	intron	ENSMUSG00000040263	ProperStrand	13	chr16	23110911	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.3283
chr11	60032301	60032339	protein_coding	Srebf1	intron	ENSMUSG00000020538	ProperStrand	24	chr5	123200030	123203746	protein_coding	Camkk2	exon	ENSMUSG00000029471	ProperStrand	35	3	-inf
chr2	37502726	37502742	protein_coding	Strbp	utr5	ENSMUSG00000026915	ProperStrand	90	chr18	35716838	35716858	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.5346
chr18	10067530	10067546	protein_coding	Rock1	exon	ENSMUSG00000024290	NonProperStrand	22	chr2	168581963	168582044	protein_coding	Sall4	exon	ENSMUSG00000027547	ProperStrand	82	1	-14.7110
chr3	135207699	135207794	protein_coding	Manba	exon	ENSMUSG00000028164	ProperStrand	18	chr18	35102297	35102324	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-9.0132
chr9	108849708	108849736	protein_coding	Uqcrc1	exon	ENSMUSG00000025651	ProperStrand	43	chr7	116664794	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.1373
chr10	95499367	95499383	protein_coding	Eea1	utr3	ENSMUSG00000036499	ProperStrand	82	chr15	79908984	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-4.8664
chr7	71517591	71517662	protein_coding	Fan1	exon	ENSMUSG00000033458	ProperStrand	4	chr18	33954880	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-14.8291
chr9	65550750	65550793	protein_coding	Zfp609	exon	ENSMUSG00000040524	ProperStrand	87	chr11	97642952	97642992	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.8614
chr19	6059362	6059442	protein_coding	Fau	exon	ENSMUSG00000038274	ProperStrand	64	chr4	56910496	56910586	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-5.9797
chr15	77356785	77356801	protein_coding	Apol7c	exon	ENSMUSG00000044309	ProperStrand	197	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-4.2827
chr2	92253823	92253839	lincRNA	D930015M05Rik	intron	ENSMUSG00000084781	ProperStrand	4	chr12	17291160	17291184	protein_coding	Pdia6	utr3	ENSMUSG00000020571	ProperStrand	114	1	-17.6869
chr3	88117199	88117480	protein_coding	Cct3	exon	ENSMUSG00000001416	ProperStrand	82	chr11	68887040	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	6	-18.2321
chr8	91554281	91554319	protein_coding	Sall1	exon	ENSMUSG00000031665	ProperStrand	96	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	3	-7.1338
chr11	9762501	9762581	LINE	Lx	L1	chr11Lx9762173	ProperStrand	1	chr4	36130009	36130099	protein_coding	Lingo2	intron	ENSMUSG00000045083	NonProperStrand	10	1	-inf
chr11	69486681	69486771	protein_coding	Senp3	utr3	ENSMUSG00000005204	ProperStrand	65	chr11	69483200	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.3145
chr12	62494213	62494303	LINE	Lx8	L1	chr12Lx862494222	NonProperStrand	1	chr12	62494013	62494103	LTR	ORR1D1	MaLR	chr12ORR1D162493925	ProperStrand	1	1	-inf
chr2	90235297	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	25808314	25811809	protein_coding	Camsap1	exon	ENSMUSG00000026933	ProperStrand	27	1	-6.0220
chr8	96704037	96704053	protein_coding	Mt1	exon	ENSMUSG00000031765	ProperStrand	92	chr19	8800361	8800451	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-4.8111
chr13	51798102	51798130	protein_coding	Sema4d	exon	ENSMUSG00000021451	ProperStrand	42	chrX	34622906	34622980	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-3.8283
chr9	78326953	78327675	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr12	106269283	106269444	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	26	-19.7709
chr1	84757378	84757398	protein_coding	Trip12	exon	ENSMUSG00000026219	ProperStrand	248	chr14	124243064	124243085	protein_coding	Itgbl1	exon	ENSMUSG00000032925	ProperStrand	159	1	-8.5169
chr2	179322378	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr4	131866155	131866291	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-3.3737
chr14	56241533	56241644	protein_coding	Rec8	exon	ENSMUSG00000002324	ProperStrand	2	chr10	23505149	23505268	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-8.0476
chr7	72471251	72473862	protein_coding	Tjp1	exon	ENSMUSG00000030516	ProperStrand	78	chr7	52381722	52381782	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-7.0520
chr11	115692585	115692602	protein_coding	Llgl2	intron	ENSMUSG00000020782	ProperStrand	62	chr9	78326630	78326776	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-6.2695
chr16	4913679	4913769	protein_coding	Mgrn1	exon	ENSMUSG00000022517	ProperStrand	14	chr12	106269421	106269501	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-7.0112
chr13	21845669	21845724	protein_coding	Hist1h2ak	utr5	ENSMUSG00000063021	ProperStrand	30	chr5	74489588	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-5.1050
chr16	20365797	20365923	protein_coding	Abcc5	exon	ENSMUSG00000022822	ProperStrand	30	chr2	4974190	4974207	protein_coding	Optn	exon	ENSMUSG00000026672	ProperStrand	451	1	-10.6731
chr15	98350232	98350277	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	NonProperStrand	9	chr13	90238584	90238679	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	NonProperStrand	1	1	-inf
chr9	40822770	40822786	protein_coding	Ubash3b	utr3	ENSMUSG00000032020	ProperStrand	42	chr16	23110917	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.3954
chr1	94917070	94917170	protein_coding	Kif1a	exon	ENSMUSG00000014602	ProperStrand	18	chr15	5068445	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-8.4826
chr9	15119616	15121068	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	chr9	15119707	15119767	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-0.6967
chr12	106005332	106005350	protein_coding	Clmn	utr3	ENSMUSG00000021097	NonProperStrand	30	chr1	130252151	130256041	protein_coding	Mcm6	exon	ENSMUSG00000026355	ProperStrand	69	1	-14.4343
chr10	3515959	3515975	protein_coding	Oprm1	utr3	ENSMUSG00000000766	ProperStrand	18	chr16	57391634	57391728	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	1	-12.7493
chr2	92440278	92440296	protein_coding	Chst1	utr5	ENSMUSG00000027221	ProperStrand	17	chr11	97642951	97643011	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.8122
chr19	8799581	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	chr7	116664798	116664926	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	15	-1.7367
chr6	149410229	149410248	protein_coding	Bicd1	intron	ENSMUSG00000003452	ProperStrand	5	chr7	36529469	36529485	protein_coding	Dpy19l3	intron	ENSMUSG00000043671	NonProperStrand	7	1	-20.9134
chr4	107846424	107846614	protein_coding	Echdc2	exon	ENSMUSG00000028601	ProperStrand	2	chr8	48972478	48972494	protein_coding	Wwc2	exon	ENSMUSG00000031563	NonProperStrand	56	1	-20.0935
chr5	96500178	96500195	protein_coding	Cnot6l	utr3	ENSMUSG00000034724	NonProperStrand	15	chr19	8963026	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-8.0770
chr18	32227678	32227735	protein_coding	Iws1	intron	ENSMUSG00000024384	NonProperStrand	4	chr7	148634720	148634810	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-9.5448
chr13	69763957	69763974	protein_coding	Nsun2	intron	ENSMUSG00000021595	NonProperStrand	9	chr11	6519882	6519944	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-11.8227
chr8	73118776	73118834	protein_coding	Isyna1	exon	ENSMUSG00000019139	ProperStrand	15	chr7	148634706	148634796	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-6.7080
chr2	113365646	113365726	protein_coding	Fmn1	exon	ENSMUSG00000044042	ProperStrand	17	chr19	8963061	8963151	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.5881
chr2	26942814	26942832	protein_coding	Adamtsl2	intron	ENSMUSG00000036040	ProperStrand	3	chr11	69483136	69483194	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-8.5256
chr9	21199312	21199840	protein_coding	Ilf3	exon	ENSMUSG00000032178	ProperStrand	164	chr11	74718967	74719010	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	2	-11.2863
chr7	26559612	26559628	protein_coding	Axl	exon	ENSMUSG00000002602	NonProperStrand	47	chr9	15119631	15119665	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.0610
chr2	172859699	172859734	protein_coding	Rbm38	utr3	ENSMUSG00000027510	ProperStrand	33	chr16	23111777	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.9163
chr7	148341302	148341371	protein_coding	Ptdss2	exon	ENSMUSG00000025495	ProperStrand	29	chr7	116663738	116663769	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.8258
chr6	120174182	120174650	protein_coding	B4galnt3	exon	ENSMUSG00000041372	ProperStrand	36	chr16	23111715	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	9	-inf
chr13	58495965	58496069	protein_coding	Hnrnpk	exon	ENSMUSG00000021546	ProperStrand	117	chr1	162966818	162966852	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-4.9550
chrX	71042180	71042202	protein_coding	Pdzd4	exon	ENSMUSG00000002006	ProperStrand	20	chr14	65372755	65372889	snoRNA	ENSMUSG00000064442_SNORA36	.	ENSMUSG00000064442	ProperStrand	296	2	-18.5878
chr2	89368462	89368478	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	chr9	15119648	15119738	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-1.1959
chr2	164521970	164521987	SINE	B4A	B4	chr2B4A164521909	ProperStrand	41	chr1	162965981	162966006	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-4.3197
chr4	21737937	21737962	protein_coding	Usp45	exon	ENSMUSG00000040455	ProperStrand	40	chr7	116663713	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-5.5563
chr11	59834288	59834304	protein_coding	Pemt	intron	ENSMUSG00000000301	ProperStrand	4	chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	1	-17.0228
chr2	75501678	75503091	protein_coding	Hnrnpa3	exon	ENSMUSG00000059005	ProperStrand	289	chr7	116664826	116664899	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-0.9578
chr18	34504685	34504775	protein_coding	Reep5	utr3	ENSMUSG00000005873	ProperStrand	19	chr16	23110919	23110999	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7016
chr3	40564299	40564315	protein_coding	Hspa4l	exon	ENSMUSG00000025757	NonProperStrand	10	chr8	73419660	73419743	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-6.6208
chr12	74213356	74213459	protein_coding	Six4	exon	ENSMUSG00000034460	ProperStrand	33	chr4	131908689	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-10.6016
chr2	91778361	91778544	protein_coding	Dgkz	exon	ENSMUSG00000040479	ProperStrand	46	chr13	51743570	51743650	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	5	-19.9677
chr15	97685557	97685573	protein_coding	Vdr	utr3	ENSMUSG00000022479	ProperStrand	14	chr19	8800377	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-10.3982
chr6	83559161	83559191	LTR	RMER15	ERVL	chr6RMER1583559029	ProperStrand	3	chr5	121655016	121655097	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-16.7232
chr10	76526723	76527284	protein_coding	Col18a1	exon	ENSMUSG00000001435	ProperStrand	287	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-4.6594
chr11	116535949	116535982	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr11	77326639	77326656	protein_coding	Trp53i13	intron	ENSMUSG00000044328	ProperStrand	14	2	-14.1300
chr11	6519878	6519944	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	chr1	162968477	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	7	-11.3450
chr16	54679541	54679559	LTR	MYSERV16_I-int	ERVK	chr16MYSERV16_I-int54679027	NonProperStrand	31	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-8.5271
chr5	119212746	119212799	protein_coding	Med13l	exon	ENSMUSG00000018076	ProperStrand	226	chr2	166889018	166889056	snoRNA	ENSMUSG00000077515_SNORD12	.	ENSMUSG00000077515	ProperStrand	191	2	-13.2652
chr6	39355808	39355839	protein_coding	Mkrn1	exon	ENSMUSG00000029922	ProperStrand	177	chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	2	-6.3571
chr11	37086906	37086927	LTR	ORR1D2	MaLR	chr11ORR1D237086729	NonProperStrand	1	chr1	162966813	162966867	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-inf
chr18	84840280	84841474	protein_coding	Cndp2	exon	ENSMUSG00000024644	ProperStrand	10	chr10	23505190	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.3364
chr2	25060673	25060693	protein_coding	Cobra1	exon	ENSMUSG00000013465	ProperStrand	17	chr14	31827485	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	2	-15.0804
chr9	120868492	120868548	protein_coding	Ctnnb1	exon	ENSMUSG00000006932	ProperStrand	214	chr15	7109223	7109240	protein_coding	Lifr	intron	ENSMUSG00000054263	NonProperStrand	14	1	-13.7300
chr17	28035004	28035104	protein_coding	Uhrf1bp1	utr3	ENSMUSG00000039512	ProperStrand	79	chr9	15118324	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	10	-inf
chr4	115484060	115484090	protein_coding	Atpaf1	utr3	ENSMUSG00000028710	ProperStrand	202	chr4	131865408	131865508	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-1.8754
chr8	97870832	97870850	protein_coding	AA960436	utr3	ENSMUSG00000031792	ProperStrand	5	chr16	23110530	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-7.3464
chr11	114601763	114601779	protein_coding	Dnaic2	exon	ENSMUSG00000034706	ProperStrand	10	chr4	131908689	131908785	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.3231
chr7	134000938	134000978	protein_coding-noncoding	Ino80e	utr3	ENSMUSG00000030689	ProperStrand	1	chr16	19883898	19884021	protein_coding	A930003A15Rik	exon	ENSMUSG00000075330	ProperStrand	93	1	-inf
chr2	79132657	79132674	protein_coding-noncoding	Itga4	utr5	ENSMUSG00000027009	NonProperStrand	118	chr1	53219102	53219119	protein_coding	1700019A02Rik	intron	ENSMUSG00000060715	ProperStrand	23	2	-19.2370
chr13	9833556	9833679	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-1.1816
chr8	127353806	127353824	protein_coding	Trim67	utr3	ENSMUSG00000036913	NonProperStrand	8	chr11	68886963	68887032	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-8.1810
chr4	147475493	147475509	protein_coding	2610109H07Rik	utr3	ENSMUSG00000029005	NonProperStrand	46	chr8	73419713	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.6165
chr6	115353900	115353917	protein_coding	Pparg	intron	ENSMUSG00000000440	NonProperStrand	3	chr1	71689694	71692145	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	1	-14.2011
chr14	76816280	76888215	protein_coding	Tsc22d1	intron	ENSMUSG00000022010	ProperStrand	86	chr16	23110829	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	8	-4.7286
chr4	151704181	151704214	protein_coding	Rpl22	exon	ENSMUSG00000028936	ProperStrand	112	chr11	69481335	69481433	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-2.1218
chr1	141354364	141383983	protein_coding	Aspm	exon	ENSMUSG00000033952	ProperStrand	64	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	22	-20.0352
chr1	191058375	191058394	protein_coding	Kcnk2	intron	ENSMUSG00000037624	ProperStrand	56	chr10	110918577	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-3.5758
chrX	110602501	110602518	protein_coding	Dach2	intron	ENSMUSG00000025592	ProperStrand	6	chr16	23111705	23111755	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-6.2752
chr12	114359283	114361329	protein_coding	Mta1	exon	ENSMUSG00000021144	ProperStrand	74	chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-6.0405
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr17	27114801	27114854	protein_coding	Ggnbp1	intron	ENSMUSG00000048731	ProperStrand	5	1	-13.1338
chr3	8561101	8561576	protein_coding	Stmn2	utr3	ENSMUSG00000027500	ProperStrand	16	chr4	131865392	131865507	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	3	-15.2395
chr4	148323440	148323488	protein_coding	Casz1	intron	ENSMUSG00000028977	NonProperStrand	23	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	4	-16.8714
chr14	67690949	67691039	protein_coding	Ppp2r2a	utr5	ENSMUSG00000022052	ProperStrand	45	chr2	59678749	59678805	protein_coding	Tanc1	intron	ENSMUSG00000035168	ProperStrand	80	2	-20.2755
chr9	44195881	44196093	protein_coding	Hyou1	exon	ENSMUSG00000032115	ProperStrand	145	chr9	78328077	78328167	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-4.6169
chr2	25784987	25785023	protein_coding	Camsap1	utr3	ENSMUSG00000026933	ProperStrand	27	chr9	15119967	15119992	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-8.8570
chr15	98864960	98867487	protein_coding	Tuba1c	exon	ENSMUSG00000043091	ProperStrand	28	chr8	73419711	73419791	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.5584
chr16	75761550	75765200	protein_coding	Hspa13	exon	ENSMUSG00000032932	NonProperStrand	57	chr1	161270498	161270554	snoRNA	ENSMUSG00000089536_Scarna3a	.	ENSMUSG00000089536	ProperStrand	247	1	-10.5794
chrX	93136011	93136027	protein_coding	Las1l	exon	ENSMUSG00000057421	ProperStrand	248	chr7	116663677	116663746	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-1.1723
chr16	68677348	68677428	LINE	L1Md_F2	L1	chr16L1Md_F268677312	NonProperStrand	1	chr17	35521348	35521438	protein_coding	H2-Q4	utr3	ENSMUSG00000035929	NonProperStrand	10	1	-inf
chr19	40626898	40626916	protein_coding	Aldh18a1	intron	ENSMUSG00000025007	ProperStrand	19	chr9	120039533	120039657	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-5.5217
chr8	112061018	112061034	protein_coding	Pmfbp1	exon	ENSMUSG00000031727	ProperStrand	4	chr17	39985500	39985523	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-11.5725
chr15	58884095	58884113	protein_coding	Mtss1	intron	ENSMUSG00000022353	NonProperStrand	51	chr7	148634701	148634753	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-4.2936
chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-1.2968
chr7	134015446	134015487	protein_coding	Taok2	exon	ENSMUSG00000059981	ProperStrand	47	chr10	23505193	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	8	-15.8326
chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	chr6	71832549	71832606	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-1.8670
chr11	72498496	72498514	protein_coding	Ube2g1	utr3	ENSMUSG00000020794	NonProperStrand	1	chr16	23111705	23111795	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-inf
chr3	14603674	14603690	protein_coding	E2f5	exon	ENSMUSG00000027552	ProperStrand	10	chr7	86852844	86852945	protein_coding	Kif7	intron	ENSMUSG00000050382	ProperStrand	12	4	-inf
chr1	164992641	164992657	protein_coding	4921528O07Rik	exon	ENSMUSG00000071890	ProperStrand	4	chr8	44273046	44273105	protein_coding	Triml2	intron	ENSMUSG00000091490	ProperStrand	32	1	-19.2592
chr5	24073324	24074038	protein_coding	Abcf2	exon	ENSMUSG00000028953	ProperStrand	50	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-5.4805
chr1	174049642	174049687	protein_coding	Copa	exon	ENSMUSG00000026553	ProperStrand	33	chr19	8798740	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	2	-9.7362
chr11	98877459	98877488	protein_coding	Top2a	exon	ENSMUSG00000020914	ProperStrand	324	chr12	12944235	12944251	protein_coding	Mycn	exon	ENSMUSG00000037169	NonProperStrand	109	1	-8.7379
chr1	30886707	30886747	protein_coding	Phf3	exon	ENSMUSG00000048874	ProperStrand	102	chr13	23662867	23662957	protein_coding	Hist1h2ae	exon	ENSMUSG00000069272	ProperStrand	51	1	-12.5759
chr17	35272362	35280380	protein_coding	Bag6	utr5	ENSMUSG00000024392	ProperStrand	181	chr9	15119644	15119766	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	12	-23.5572
chr8	73033429	73033519	protein_coding	2810422J05Rik	exon	ENSMUSG00000055553	ProperStrand	171	chr10	90581059	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-2.8641
chr19	30188249	30188313	protein_coding	Gldc	exon	ENSMUSG00000024827	ProperStrand	175	chr11	77995188	77995230	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-4.1144
chr12	113883068	113883158	protein_coding	Siva1	utr5	ENSMUSG00000064326	ProperStrand	7	chr11	69483177	69483257	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-6.6014
chr11	6428040	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr11	62416957	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	19	-3.6308
chr17	26766520	26766565	protein_coding	Ergic1	exon	ENSMUSG00000001576	ProperStrand	114	chr8	113245625	113245641	protein_coding	Mtss1l	exon	ENSMUSG00000033763	ProperStrand	12	1	-15.3097
chr4	140271829	140271888	protein_coding	Rcc2	exon	ENSMUSG00000040945	ProperStrand	228	chr7	29136563	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-1.1678
chr15	31227003	31227020	protein_coding	Ankrd33b	exon	ENSMUSG00000022237	ProperStrand	55	chr17	24857715	24857746	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.4438
chr2	90235295	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	109044954	109046253	protein_coding	3200002M19Rik	utr5	ENSMUSG00000030649	ProperStrand	22	1	-6.4314
chr18	14843326	14843406	SINE	B2_Mm2	B2	chr18B2_Mm214843292	ProperStrand	3	chr12	17552961	17552997	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	3	-inf
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr7	52382254	52382314	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-3.9234
chr9	45749421	45749966	protein_coding	Sidt2	exon	ENSMUSG00000034908	ProperStrand	10	chr11	6428077	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-6.6888
chrX	98497294	98497354	protein_coding	Nlgn3	utr5	ENSMUSG00000031302	ProperStrand	6	chr9	86360894	86373238	protein_coding	Dopey1	utr5	ENSMUSG00000034973	ProperStrand	10	1	-19.0093
chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	chr17	35299507	35299559	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-1.6422
chr12	107037871	107037935	protein_coding	Papola	exon	ENSMUSG00000021111	ProperStrand	67	chr4	131908298	131908355	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.2634
chr19	47120346	47122454	protein_coding	Pcgf6	exon	ENSMUSG00000025050	ProperStrand	14	chr15	82980101	82980191	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-10.0866
chr11	45723144	45723160	protein_coding	Clint1	utr3	ENSMUSG00000006169	NonProperStrand	273	chr16	57391760	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	1	-4.8183
chr15	5066658	5066676	protein_coding	Rpl37	utr5	ENSMUSG00000041841	ProperStrand	69	chr5	121655017	121655107	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.4890
chr7	29171540	29171558	protein_coding	Med29	utr3	ENSMUSG00000003444	NonProperStrand	134	chr7	125253522	125258344	protein_coding	Rps15a	exon	ENSMUSG00000008683	ProperStrand	28	1	-13.2418
chr2	69542899	69542941	protein_coding	Fastkd1	intron	ENSMUSG00000027086	ProperStrand	9	chr7	148634718	148634808	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-7.7646
chr15	99558297	99558320	protein_coding	2310016M24Rik	utr3	ENSMUSG00000023020	ProperStrand	2	chr16	23111448	23111503	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-8.0851
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr4	128898081	128898136	protein_coding	C77080	utr3	ENSMUSG00000050390	ProperStrand	48	2	-11.8293
chr16	72664244	72664260	protein_coding	Robo1	utr5	ENSMUSG00000022883	ProperStrand	47	chr16	23110527	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.8869
chr19	11271200	11271217	protein_coding	Ms4a13	utr5	ENSMUSG00000057240	ProperStrand	59	chr19	8963030	8963081	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.3030
chr8	98269959	98270096	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	chr7	118219574	118219730	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	12	-1.8808
chr10	77462884	77462906	protein_coding	Pfkl	exon	ENSMUSG00000020277	ProperStrand	179	chr17	39985563	39985612	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-3.8331
chr9	78023110	78023162	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr2	130103751	130103796	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	2	-2.8479
chr10	126986995	126987084	protein_coding	Lrp1	exon	ENSMUSG00000040249	ProperStrand	151	chr16	23111776	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	5	-4.8325
chr2	129998658	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr9	42773627	42773668	protein_coding	Arhgef12	utr3	ENSMUSG00000059495	ProperStrand	16	1	-10.7885
chr12	25340235	25340325	protein_coding	Klf11	exon	ENSMUSG00000020653	ProperStrand	4	chr16	23111694	23111774	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-7.1763
chr8	37677493	37677509	protein_coding	Dlc1	intron	ENSMUSG00000031523	NonProperStrand	19	chr19	8798740	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-7.0771
chr7	106631294	106631346	snoRNA	ENSMUSG00000065822_Snord15a	.	ENSMUSG00000065822	ProperStrand	128	chr19	8963027	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-3.5211
chr11	101440258	101440274	protein_coding	Nbr1	intron	ENSMUSG00000017119	ProperStrand	91	chr5	108336377	108336408	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-4.0862
chr19	45836749	45857821	protein_coding	Mgea5	exon	ENSMUSG00000025220	ProperStrand	53	chr4	131908689	131908851	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-7.8774
chr5	138016062	138016079	protein_coding	Tfr2	exon	ENSMUSG00000029716	ProperStrand	3	chr10	112365984	112366001	protein_coding	Atxn7l3b	utr5	ENSMUSG00000074748	ProperStrand	18	1	-22.0931
chr12	105934747	105934847	protein_coding	Dicer1	exon	ENSMUSG00000041415	ProperStrand	61	chr16	43886793	43886851	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	1	-8.0423
chr7	116664806	116664872	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	chr11	68938672	68938724	tRNA	tRNA1816-LysTTT	.	568282	ProperStrand	13	5	-inf
chr1	55145182	55145900	protein_coding	Hspe1	utr5	ENSMUSG00000073676	ProperStrand	31	chr9	120039570	120039622	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-4.5608
chr10	88218001	88219839	protein_coding	Utp20	exon	ENSMUSG00000004356	ProperStrand	45	chr11	116533860	116533893	snoRNA	ENSMUSG00000065640_Snord1c	.	ENSMUSG00000065640	ProperStrand	373	1	-10.2321
chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	chr16	91227718	91227735	protein_coding	Olig2	utr3	ENSMUSG00000039830	NonProperStrand	78	1	-9.7493
chr1	183849478	183849516	protein_coding	Enah	exon	ENSMUSG00000022995	ProperStrand	196	chr16	23110455	23110571	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-2.5741
chr8	26049195	26049213	protein_coding	Adam32	intron	ENSMUSG00000037437	NonProperStrand	7	chr2	167310874	167310893	protein_coding	Spata2	exon	ENSMUSG00000047030	ProperStrand	9	1	-19.9681
chrX	34454758	34454774	protein_coding	Sept6	utr3	ENSMUSG00000050379	ProperStrand	29	chr9	120039533	120039587	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-4.6899
chr5	102945225	102945241	protein_coding	Arhgap24	intron	ENSMUSG00000057315	NonProperStrand	21	chr9	120038466	120038529	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.0221
chr9	15130895	15131006	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	chr3	108357255	108357358	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	2	-2.1179
chr8	42078248	42078289	protein_coding	Mtus1	utr3	ENSMUSG00000045636	ProperStrand	12	chr7	63234732	63234748	protein_coding	Nipa1	utr3	ENSMUSG00000047037	ProperStrand	16	1	-19.5274
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr10	127558257	127558344	protein_coding	Baz2a	exon	ENSMUSG00000040054	ProperStrand	274	2	-5.8801
chr7	51889892	51893167	protein_coding	Myh14	exon	ENSMUSG00000030739	ProperStrand	29	chr17	27559700	27559717	protein_coding	Grm4	utr3	ENSMUSG00000063239	ProperStrand	147	1	-12.9861
chr1	177539833	177539863	protein_coding	Fh1	exon	ENSMUSG00000026526	ProperStrand	37	chr8	73419657	73419773	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.0248
chr11	106684003	106684019	protein_coding	Smurf2	exon	ENSMUSG00000018363	ProperStrand	79	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.7847
chr5	10216500	10216600	LINE	L1Md_T	L1	chr5L1Md_T10216107	ProperStrand	1	chr18	58204892	58204909	protein_coding	Fbn2	intron	ENSMUSG00000024598	NonProperStrand	12	1	-inf
chr4	131826061	131826125	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	chr2	26494708	26494789	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	3	-1.3361
chr5	108698542	108698590	protein_coding	Dr1	utr5	ENSMUSG00000029265	ProperStrand	11	chr16	23111770	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-8.3918
chr5	113370707	113370723	protein_coding	Adrbk2	exon	ENSMUSG00000042249	ProperStrand	56	chr11	115254728	115254765	protein_coding	Cdr2l	exon	ENSMUSG00000050910	ProperStrand	9	1	-17.2770
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr18	38610730	38610748	protein_coding	Ndfip1	intron	ENSMUSG00000024425	ProperStrand	42	1	-5.1514
chr8	126470500	126472986	protein_coding	Nup133	exon	ENSMUSG00000039509	ProperStrand	59	chr4	131908356	131908431	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.4429
chr15	81874356	81874427	protein_coding	Nhp2l1	exon	ENSMUSG00000063480	ProperStrand	40	chr11	62416631	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-5.9611
chr13	17078842	17078863	protein_coding	5033411D12Rik	intron	ENSMUSG00000055137	NonProperStrand	23	chr7	118219575	118219662	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-9.8609
chr1	59539683	59539700	protein_coding	Fzd7	utr5	ENSMUSG00000041075	ProperStrand	373	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	3	-6.4347
chr13	104840853	104840869	protein_coding	Nln	exon	ENSMUSG00000021710	ProperStrand	47	chr11	83107805	83107834	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	1	-9.3267
chr5	143665533	143665608	protein_coding	Actb	exon	ENSMUSG00000029580	ProperStrand	446	chr11	102294590	102294607	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	4	-15.3368
chr5	124218324	124219624	protein_coding	Kntc1	exon	ENSMUSG00000029414	ProperStrand	27	chr7	52488197	52488229	protein_coding	Tead2	exon	ENSMUSG00000030796	ProperStrand	39	2	-19.7601
chr4	154509291	154509347	protein_coding	Morn1	intron	ENSMUSG00000029049	ProperStrand	7	chr16	23111418	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-12.6567
chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	chr6	71832667	71832687	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-1.1207
chr13	38437929	38437946	protein_coding	Bmp6	utr5	ENSMUSG00000039004	ProperStrand	21	chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	1	-10.7161
chr12	110892845	110892904	snoRNA	ENSMUSG00000064621_AF357355	.	ENSMUSG00000064621	ProperStrand	60	chr8	73419657	73419757	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.1303
chr13	29461548	29461626	protein_coding	Cdkal1	intron	ENSMUSG00000006191	NonProperStrand	41	chr10	107701513	107701603	protein_coding	Ppp1r12a	intron	ENSMUSG00000019907	ProperStrand	65	1	-13.9253
chr3	89211387	89211430	protein_coding	Flad1	exon	ENSMUSG00000042642	ProperStrand	7	chr3	123210854	123210880	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-10.2105
chr19	46143914	46143990	protein_coding	Pprc1	exon	ENSMUSG00000055491	ProperStrand	143	chr1	162965531	162965587	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.7993
chr2	145076805	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	chr17	13115655	13115715	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	1	-2.2567
chr6	71832577	71832677	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	chr14	52829531	52829565	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-1.1492
chr5	118376503	118376519	protein_coding	Nos1	exon	ENSMUSG00000029361	NonProperStrand	237	chr14	76247711	76247787	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-1.7676
chr3	96362878	96362999	lincRNA	Gm15441	intron	ENSMUSG00000074398	ProperStrand	24	chr9	65478636	65478673	protein_coding	Rbpms2	exon	ENSMUSG00000032387	ProperStrand	85	1	-14.4704
chr12	103492723	103492741	protein_coding	Slc24a4	exon	ENSMUSG00000041771	ProperStrand	9	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-9.0335
chr11	69401889	69401930	protein_coding	Trp53	exon	ENSMUSG00000059552	ProperStrand	47	chr10	110918606	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-3.9024
chr7	72078006	72078086	protein_coding	Fam189a1	intron	ENSMUSG00000030518	ProperStrand	7	chr4	126859749	126859839	protein_coding	Dlgap3	intron	ENSMUSG00000042388	ProperStrand	12	1	-21.2490
chr2	25795336	25795409	protein_coding	Camsap1	exon	ENSMUSG00000026933	ProperStrand	27	chr10	90581067	90581112	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-6.3762
chr11	80415108	80415125	protein_coding	Myo1d	exon	ENSMUSG00000035441	ProperStrand	144	chr1	162966813	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-4.5570
chr3	88117176	88117275	protein_coding	Cct3	exon	ENSMUSG00000001416	ProperStrand	82	chr4	131908686	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-1.6919
chr7	150755995	150756011	protein_coding	Cars	exon	ENSMUSG00000010755	ProperStrand	62	chr1	162965531	162965577	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.2167
chr5	36723564	36723606	protein_coding	Sorcs2	intron	ENSMUSG00000029093	ProperStrand	21	chr8	98294443	98294468	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	1	-12.1176
chr7	106628073	106628099	snoRNA	ENSMUSG00000064966_Snord15b	.	ENSMUSG00000064966	ProperStrand	74	chr11	98878344	98878462	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	2	-9.5614
chr11	58682398	58682415	protein_coding	2810021J22Rik	utr5	ENSMUSG00000020491	ProperStrand	162	chr17	71323739	71323795	protein_coding	Myl12b	exon	ENSMUSG00000034868	ProperStrand	35	1	-12.4095
chr5	64400626	64400706	LTR	MTC	MaLR	chr5MTC64400554	NonProperStrand	1	chr17	13181125	13181215	protein_coding	Wtap	intron	ENSMUSG00000060475	NonProperStrand	8	1	-inf
chr13	15556187	15556204	protein_coding	Gli3	intron	ENSMUSG00000021318	NonProperStrand	5	chr2	18508668	18508708	tRNA	tRNA1947-AsnGTT	.	1820919	ProperStrand	179	1	-16.2240
mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr19	10629626	10629643	protein_coding	Tmem216	utr5	ENSMUSG00000024667	NonProperStrand	4	1	-11.5429
chr2	156586613	156587533	protein_coding	Dlgap4	exon	ENSMUSG00000061689	ProperStrand	80	chr7	117189952	117190032	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.8168
chr6	72907634	72907984	protein_coding	Tmsb10	exon	ENSMUSG00000079523	ProperStrand	24	chr12	112779162	112779242	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-6.5799
chr11	4390983	4391024	protein_coding	Mtmr3	exon	ENSMUSG00000034354	ProperStrand	25	chr17	35089181	35089237	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-7.2235
chr3	156224612	156224628	lincRNA	4930570G19Rik	exon	ENSMUSG00000085084	ProperStrand	326	chr2	21136127	21136143	protein_coding	Thnsl1	utr3	ENSMUSG00000048550	ProperStrand	10	1	-13.5912
chr6	147056593	147056610	protein_coding	Klhdc5	exon	ENSMUSG00000040102	ProperStrand	13	chr11	62416599	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-8.2303
chr4	123059020	123059084	protein_coding	Macf1	exon	ENSMUSG00000028649	ProperStrand	320	chr1	42755254	42755270	protein_coding	Pou3f3	exon	ENSMUSG00000045515	NonProperStrand	117	1	-8.6213
chr1	4868151	4876852	protein_coding	Tcea1	exon	ENSMUSG00000033813	ProperStrand	24	chr19	8963087	8963167	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.9221
chr7	146056630	146056730	protein_coding	Ppp2r2d	intron	ENSMUSG00000041769	ProperStrand	62	chr1	162968454	162968510	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-6.0144
chr11	60590425	60590441	protein_coding	Top3a	exon	ENSMUSG00000002814	ProperStrand	28	chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-7.9776
chr19	44188367	44188486	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr15	5068407	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	14	-18.9197
chr18	35744313	35744408	protein_coding	Matr3	exon	ENSMUSG00000037236	ProperStrand	90	chr2	75673935	75673976	protein_coding	Agps	intron	ENSMUSG00000042410	ProperStrand	22	1	-14.5329
chr11	3873251	3876339	protein_coding	Pes1	exon	ENSMUSG00000020430	ProperStrand	49	chr7	116664803	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	5	-13.0374
chr7	34811661	34811751	LTR	RLTR5_Mm	ERV1	chr7RLTR5_Mm34811570	NonProperStrand	1	chr7	34811895	34811985	LTR	RLTR6-int	ERV1	chr7RLTR6-int34811826	NonProperStrand	1	1	-inf
chr9	44447924	44447949	protein_coding	Ddx6	utr3	ENSMUSG00000032097	ProperStrand	59	chr3	68889148	68889220	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	5	-14.2253
chr8	90304979	90304995	protein_coding	Zfp423	exon	ENSMUSG00000045333	NonProperStrand	44	chr7	29136525	29136632	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.9030
chr6	148825051	148825117	protein_coding	Caprin2	intron	ENSMUSG00000030309	ProperStrand	12	chr17	24857771	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-5.3067
chr8	86611823	86611913	protein_coding	Rfx1	exon	ENSMUSG00000031706	ProperStrand	20	chr11	97642952	97642983	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	4	-14.5693
chr13	65760923	65761013	LINE	Lx2B	L1	chr13Lx2B65760863	ProperStrand	1	chr13	65761302	65761382	LINE	Lx2B	L1	chr13Lx2B65761235	ProperStrand	1	1	-inf
chr2	24825186	24827046	protein_coding	Wdr85	exon	ENSMUSG00000026975	ProperStrand	323	chr11	62418036	62418053	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-2.4369
chr1	91354897	91354914	protein_coding	Agap1	intron	ENSMUSG00000055013	NonProperStrand	32	chr11	68886960	68887037	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-5.3573
chr10	12378463	12380667	protein_coding	Utrn	exon	ENSMUSG00000019820	ProperStrand	69	chr8	77742558	77742574	protein_coding	Rasd2	exon	ENSMUSG00000034472	NonProperStrand	237	1	-10.2779
chr7	151663844	151663861	protein_coding	Ppfia1	utr3	ENSMUSG00000037519	NonProperStrand	4	chr11	6428086	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-8.6824
chr3	108357254	108357354	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	chr5	92485086	92485140	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	2	-1.6262
chr19	44188364	44188501	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr10	80641693	80641760	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	2	-4.1239
chr10	79442419	79442482	protein_coding	ORF61	exon	ENSMUSG00000013858	ProperStrand	71	chr6	94776851	94776876	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	1	-8.7635
chr4	140813317	140813333	protein_coding	Arhgef19	utr3	ENSMUSG00000028919	NonProperStrand	12	chr6	146546044	146546076	protein_coding	Fgfr1op2	utr3	ENSMUSG00000040242	ProperStrand	4	1	-20.4237
chr10	27587841	27587921	LTR	ORR1A0-int	MaLR	chr10ORR1A0-int27587794	NonProperStrand	1	chr10	27587594	27587684	LTR	RLTR6_Mm	ERV1	chr10RLTR6_Mm27587346	NonProperStrand	1	1	-inf
chr7	149170854	149171340	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	chr1	9932550	9932625	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-5.6954
chr5	74489203	74489680	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr5	74489542	74489683	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	261	-inf
chr17	36000485	36000501	protein_coding	Nrm	exon	ENSMUSG00000059791	ProperStrand	253	chr19	8798740	8798788	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-2.1913
chrX	148060160	148060176	protein_coding	Phf8	utr3	ENSMUSG00000041229	ProperStrand	17	chr18	35716684	35716812	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	NonProperStrand	45	1	-16.4439
chr4	75094306	75094322	LINE	Lx9	L1	chr4Lx975094037	ProperStrand	41	chr8	13416896	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	2	-11.5978
chr14	55055625	55057872	protein_coding	Mmp14	exon	ENSMUSG00000000957	ProperStrand	61	chr5	130300417	130300464	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-4.3819
chr16	97392260	97392277	protein_coding	Dscam	utr5	ENSMUSG00000050272	NonProperStrand	12	chr4	131865866	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-15.3540
chr2	32162200	32162216	protein_coding	Golga2	utr3	ENSMUSG00000002546	NonProperStrand	35	chr10	23505207	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.0450
chr17	66468411	66468427	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	chr1	155066233	155066325	protein_coding	Lamc1	utr3	ENSMUSG00000026478	ProperStrand	239	1	-7.0992
chr4	47807250	47807268	LINE	L1MB3	L1	chr4L1MB347807088	ProperStrand	1	chr7	116663640	116663748	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-inf
chr11	29592943	29593008	protein_coding	Rtn4	utr5	ENSMUSG00000020458	ProperStrand	117	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	5	-10.3008
chr13	9833553	9833652	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr14	35149326	35149350	protein_coding	Glud1	exon	ENSMUSG00000021794	ProperStrand	72	1	-4.6034
chrX	159218739	159218756	protein_coding	Txlng	utr3	ENSMUSG00000038344	ProperStrand	45	chr4	131908356	131908410	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.8531
chr16	24984504	24984521	protein_coding	Lpp	utr3	ENSMUSG00000033306	NonProperStrand	189	chr9	15119286	15119397	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	2	-5.1184
chr7	112782969	112782985	protein_coding	Arfip2	utr3	ENSMUSG00000030881	ProperStrand	191	chr1	162968442	162968465	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-3.8520
chr10	5987745	5987835	protein_coding	Akap12	utr3	ENSMUSG00000038587	ProperStrand	1008	chr11	6519812	6519892	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-2.5635
chr8	80958955	80959039	protein_coding	Pou4f2	exon	ENSMUSG00000031688	ProperStrand	2	chr14	64081493	64081512	protein_coding	Fam167a	utr3	ENSMUSG00000035095	ProperStrand	80	1	-20.5289
chr11	76604348	76604534	protein_coding	Cpd	exon	ENSMUSG00000020841	ProperStrand	46	chr18	35716831	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-4.6058
chr11	11867679	11870432	protein_coding	Grb10	exon	ENSMUSG00000020176	NonProperStrand	159	chr5	145892237	145892258	protein_coding	Pdap1	exon	ENSMUSG00000029623	ProperStrand	112	1	-10.1045
chr4	140723745	140723761	protein_coding	Fbxo42	exon	ENSMUSG00000028920	ProperStrand	91	chr17	39985193	39985246	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-5.1191
chr16	18245405	18247382	protein_coding	Ranbp1	exon	ENSMUSG00000005732	ProperStrand	22	chr2	26494708	26494800	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-8.2982
chr15	12200350	12200440	protein_coding	Mtmr12	utr3	ENSMUSG00000039458	ProperStrand	16	chr10	110918365	110922627	protein_coding	Nap1l1	exon	ENSMUSG00000058799	ProperStrand	185	1	-13.7424
chr18	38060430	38061771	protein_coding	Diap1	exon	ENSMUSG00000024456	ProperStrand	77	chr7	148634699	148634789	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-3.5219
chr19	7059892	7059947	protein_coding	Vegfb	exon	ENSMUSG00000024962	ProperStrand	24	chr4	131908687	131908737	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-12.5699
chr3	104627125	104627210	protein_coding	Capza1	utr3	ENSMUSG00000070372	ProperStrand	42	chr8	129468746	129468836	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-5.1016
chr14	121343065	121343101	protein_coding	Ipo5	exon	ENSMUSG00000030662	ProperStrand	135	chr4	33051771	33051857	pseudogene	Gm11942	.	ENSMUSG00000059634	ProperStrand	27	4	-23.6717
chr7	13516170	13516204	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr9	121823892	121823908	protein_coding	Cyp8b1	exon	ENSMUSG00000050445	NonProperStrand	101	1	-7.6266
chr11	102904544	102904578	protein_coding	Nmt1	exon	ENSMUSG00000020936	ProperStrand	43	chr8	32260335	32260370	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-5.2753
chr4	85016349	85016365	protein_coding	Sh3gl2	intron	ENSMUSG00000028488	NonProperStrand	313	chr13	22135077	22135126	protein_coding	Hist1h2bj	utr5	ENSMUSG00000069300	ProperStrand	13	1	-13.1194
chrX	34541681	34541706	LINE	Lx3A	L1	chrXLx3A34541570	NonProperStrand	1	chr7	29136586	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-inf
chr3	67177774	67177791	protein_coding	Gm17402	intron	ENSMUSG00000090408	NonProperStrand	2	chr7	52382753	52382832	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	2	-inf
chr7	26533412	26535890	protein_coding	Hnrnpul1	exon	ENSMUSG00000040725	ProperStrand	84	chr16	23110471	23110571	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	4	-7.3674
chr4	131908236	131908811	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	chr13	23528215	23528284	tRNA	tRNA103-LysCTT	.	102797	ProperStrand	180	8	-6.0686
chr2	177273823	177273903	LINE	L1_Mus1	L1	chr2L1_Mus1177271342	ProperStrand	1	chr7	65545578	65545668	LINE	L1Md_F3	L1	chr7L1Md_F365544024	ProperStrand	1	1	-inf
chr12	52465070	52465170	protein_coding	G2e3	intron	ENSMUSG00000035293	ProperStrand	53	chr12	56700673	56700694	protein_coding	Insm2	exon	ENSMUSG00000045440	NonProperStrand	22	3	-20.5054
chr8	93540781	93540817	protein_coding	Chd9	intron	ENSMUSG00000056608	ProperStrand	35	chr13	46765144	46765160	protein_coding	C78339	exon	ENSMUSG00000069237	NonProperStrand	104	1	-13.3022
chr11	77995187	77995260	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	chr12	106269284	106269556	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	8	-1.3786
chr1	31000827	31001441	protein_coding	Ptp4a1	exon	ENSMUSG00000026064	ProperStrand	26	chr10	23505152	23505197	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-6.7978
chr4	41146614	41146858	protein_coding	Ubap2	exon	ENSMUSG00000028433	ProperStrand	292	chrX	71517833	71517854	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	4	-11.6325
chr6	70805449	70805539	snoRNA	ENSMUSG00000065750_SNORA5	.	ENSMUSG00000065750	ProperStrand	165	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-3.2921
chr10	111341799	111341817	SINE	B4	B4	chr10B4111341691	ProperStrand	1	chr3	127100569	127100590	protein_coding	Ank2	intron	ENSMUSG00000032826	ProperStrand	30	1	-inf
chr1	55044872	55044939	protein_coding	Sf3b1	exon	ENSMUSG00000025982	ProperStrand	158	chr2	26494780	26494827	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-2.8179
chr10	62802344	62802360	protein_coding	Sirt1	intron	ENSMUSG00000020063	NonProperStrand	116	chr1	162965531	162965554	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.1328
chr11	69483136	69483278	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	chr6	124665309	124665488	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	16	-2.3205
chr2	69699737	69699762	protein_coding	Ssb	utr5	ENSMUSG00000068882	ProperStrand	37	chr11	69483206	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	4	-11.2792
chr5	111097619	111137864	protein_coding	Ep400	exon	ENSMUSG00000029505	ProperStrand	176	chr11	69481340	69481473	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-2.6856
chr7	28146782	28146798	protein_coding	Spnb4	exon	ENSMUSG00000011751	NonProperStrand	84	chr14	87912387	87912403	protein_coding	Tdrd3	utr3	ENSMUSG00000022019	NonProperStrand	46	1	-13.1774
chr3	144232816	144232832	protein_coding	Hs2st1	utr5	ENSMUSG00000040151	NonProperStrand	31	chr9	120037898	120037991	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	4	-17.8763
chr10	60798359	60798459	protein_coding	X99384	intron	ENSMUSG00000020092	ProperStrand	60	chr4	131908236	131908272	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.4187
chr10	122116177	122116196	protein_coding	Ppm1h	utr5	ENSMUSG00000034613	ProperStrand	51	chrX	83547356	83547372	protein_coding	Mageb4	intron	ENSMUSG00000035427	NonProperStrand	191	1	-11.3181
chrX	34337013	34337073	protein_coding	Slc25a5	exon	ENSMUSG00000016319	ProperStrand	55	chr9	26786794	26786832	protein_coding	Acad8	exon	ENSMUSG00000031969	ProperStrand	4	1	-18.8945
chr11	32638400	32638417	protein_coding	Fbxw11	exon	ENSMUSG00000020271	ProperStrand	36	chr1	133141328	133141345	protein_coding	Rassf5	exon	ENSMUSG00000026430	ProperStrand	73	1	-13.9542
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	2	-3.2244
chr11	68903339	68903525	protein_coding	Vamp2	exon	ENSMUSG00000020894	ProperStrand	8	chr16	23110902	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.2180
chr1	71649046	71651553	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr3	66790039	66790055	protein_coding	Rsrc1	utr5	ENSMUSG00000034544	NonProperStrand	71	1	-7.4973
chr1	20552542	20552558	protein_coding	Pkhd1	exon	ENSMUSG00000043760	NonProperStrand	49	chr5	135857995	135858011	protein_coding	Pom121	exon	ENSMUSG00000053293	NonProperStrand	94	1	-12.8203
chr8	86522336	86522416	protein_coding	Samd1	exon	ENSMUSG00000079003	ProperStrand	20	chr7	148634698	148634788	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-6.1264
chr2	97818106	97818123	LTR	MTE2a	MaLR	chr2MTE2a97818097	ProperStrand	24	chr15	81745174	81745238	protein_coding	Aco2	utr3	ENSMUSG00000022477	ProperStrand	237	1	-12.4138
chr16	17894461	17894477	protein_coding	Tssk1	exon	ENSMUSG00000041566	NonProperStrand	62	chr15	79913294	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-3.5317
chrX	96245892	96245908	protein_coding	Stard8	intron	ENSMUSG00000031216	ProperStrand	142	chr8	112363199	112363232	snoRNA	ENSMUSG00000077549_Snord71	.	ENSMUSG00000077549	ProperStrand	196	1	-9.2117
chr9	15119285	15119425	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	chr8	129468746	129468869	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	16	-3.3830
chr6	35191366	35191383	protein_coding	Nup205	exon	ENSMUSG00000038759	NonProperStrand	10	chr16	23111385	23111436	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-7.4327
chr16	13803636	13803676	protein_coding	Rrn3	intron	ENSMUSG00000022682	ProperStrand	58	chr3	136526736	136526753	protein_coding	Ppp3ca	intron	ENSMUSG00000028161	NonProperStrand	120	1	-11.9908
chr8	71416542	71416631	protein_coding	Lpl	exon	ENSMUSG00000015568	ProperStrand	11	chr10	23505596	23505627	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	5	-19.4966
chr4	122968676	122968725	protein_coding	Pabpc4	intron	ENSMUSG00000011257	ProperStrand	85	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-9.7288
chr1	181733645	181733662	protein_coding	Ahctf1	utr5	ENSMUSG00000026491	ProperStrand	39	chr12	80357094	80357110	protein_coding	Zfyve26	intron	ENSMUSG00000066440	NonProperStrand	5	1	-18.2354
chr7	29180509	29180527	protein_coding	Paf1	exon	ENSMUSG00000003437	NonProperStrand	1	chr13	38694967	38695057	protein_coding	Muted	utr3	ENSMUSG00000038982	NonProperStrand	1	1	-inf
chr11	57874267	57874288	protein_coding	Larp1	utr3	ENSMUSG00000037331	ProperStrand	201	chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	1	-6.7807
chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	chr2	152106794	152106849	protein_coding	Csnk2a1	utr3	ENSMUSG00000074698	ProperStrand	91	1	-9.4403
chr1	178952879	178952949	protein_coding	Akt3	utr3	ENSMUSG00000019699	ProperStrand	12	chr11	62416633	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-8.3961
chr9	26810841	26810860	protein_coding	Thyn1	intron	ENSMUSG00000035443	ProperStrand	13	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	4	-19.5525
chr10	79325203	79325259	protein_coding	Ptbp1	exon	ENSMUSG00000006498	ProperStrand	129	chr18	35714196	35714290	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-2.1090
chr2	4829164	4829180	protein_coding	Sephs1	utr3	ENSMUSG00000026662	NonProperStrand	271	chr4	133169574	133169780	protein_coding	Zdhhc18	exon	ENSMUSG00000037553	ProperStrand	51	1	-10.6182
chr17	34255823	34255856	protein_coding	Brd2	utr5	ENSMUSG00000024335	ProperStrand	69	chr4	96412508	96412526	protein_coding	Gm12695	intron	ENSMUSG00000078639	ProperStrand	110	1	-11.8155
chr19	55163381	55165649	protein_coding	Gpam	exon	ENSMUSG00000024978	ProperStrand	19	chr5	74489554	74489644	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	10	-24.6431
chr10	76725188	76725288	protein_coding	Pofut2	exon	ENSMUSG00000020260	ProperStrand	4	chr12	17553062	17553090	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-10.7041
chr2	4315773	4315791	protein_coding	Frmd4a	intron	ENSMUSG00000026657	ProperStrand	44	chr8	96703219	96704018	protein_coding	Mt1	exon	ENSMUSG00000031765	ProperStrand	92	1	-13.0836
chr11	69660576	69660851	protein_coding	Plscr3	exon	ENSMUSG00000019461	NonProperStrand	2	chr19	8798743	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	2	-inf
chr9	72589441	72596947	protein_coding	Nedd4	exon	ENSMUSG00000032216	ProperStrand	308	chr3	123210853	123210982	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-0.9425
chr13	9833562	9833671	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr16	24984504	24984520	protein_coding	Lpp	utr3	ENSMUSG00000033306	NonProperStrand	189	1	-2.8230
chr13	9833554	9833679	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr9	110846714	110846740	protein_coding	Tdgf1	exon	ENSMUSG00000032494	ProperStrand	218	2	-4.5135
chr16	63158264	63158280	LINE	L2	L2	chr16L263158147	NonProperStrand	17	chr8	73419716	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-5.5405
chr11	87425431	87425458	protein_coding	Mtmr4	exon	ENSMUSG00000018401	ProperStrand	14	chr19	40625189	40625205	protein_coding	Aldh18a1	utr3	ENSMUSG00000025007	ProperStrand	19	1	-19.2569
chr8	107824414	107824458	protein_coding	E2f4	exon	ENSMUSG00000014859	ProperStrand	32	chr4	45828422	45828438	protein_coding	Igfbpl1	exon	ENSMUSG00000035551	ProperStrand	4	1	-19.3591
chr7	52381972	52384027	protein_coding-noncoding	Rpl13a	utr3	ENSMUSG00000074129	ProperStrand	106	chr7	52382068	52383941	protein_coding	Rpl13a	exon	ENSMUSG00000074129	ProperStrand	269	8	-19.5834
chr5	113749922	113749951	LTR	RLTR19-int	ERVK	chr5RLTR19-int113748909	NonProperStrand	2	chr2	145069343	145069360	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-15.1878
chr3	81285498	81285516	LTR	MLT1D	MaLR	chr3MLT1D81285419	ProperStrand	1	chr4	116828379	116828452	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-inf
chr1	138382212	138382230	protein_coding	Kif14	intron	ENSMUSG00000041498	NonProperStrand	36	chr2	26768370	26768433	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	2	-10.6983
chr15	99555194	99555210	protein_coding	Gpd1	utr3	ENSMUSG00000023019	ProperStrand	40	chr5	130300420	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.2271
chr18	10052132	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr11	67167096	67167112	protein_coding	Myh13	exon	ENSMUSG00000060180	ProperStrand	145	1	-7.0428
chr15	25681982	25682001	protein_coding	Myo10	intron	ENSMUSG00000022272	ProperStrand	168	chr18	35716745	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-2.5177
chr2	43565212	43565229	DNA	MER5A	MER1_type	chr2MER5A43565117	ProperStrand	5	chr9	42932836	42932852	protein_coding	Pou2f3	utr3	ENSMUSG00000032015	NonProperStrand	10	1	-19.1587
chr16	25892128	25892144	protein_coding	Trp63	utr3	ENSMUSG00000022510	ProperStrand	4	chr2	26494788	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-8.5876
chr12	109227979	109227995	protein_coding	Bcl11b	exon	ENSMUSG00000048251	ProperStrand	14	chr16	23111384	23111418	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.7143
chr3	142473674	142473774	protein_coding	Pkn2	exon	ENSMUSG00000004591	ProperStrand	28	chr19	8799604	8799644	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-8.2931
chr3	97817679	97851652	protein_coding	Notch2	exon	ENSMUSG00000027878	ProperStrand	86	chr12	8223781	8223798	protein_coding	1110057K04Rik	intron	ENSMUSG00000037669	ProperStrand	25	1	-14.3642
chr7	135589218	135589743	protein_coding	Tial1	exon	ENSMUSG00000030846	NonProperStrand	3	chr18	33954816	33954906	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	NonProperStrand	24	2	-inf
chr16	32143803	32143820	protein_coding	Lrrc33	exon	ENSMUSG00000052384	ProperStrand	8	chr18	73693169	73693188	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-9.6171
chr13	100899247	100899264	protein_coding	Smn1	intron	ENSMUSG00000021645	ProperStrand	22	chr5	121655099	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.6854
chr12	55835615	55835705	snRNA	ENSMUSG00000075960_U1	.	ENSMUSG00000075960	ProperStrand	210	chr9	15119967	15119994	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-4.7990
chr6	85411551	85412082	protein_coding	Cct7	exon	ENSMUSG00000030007	ProperStrand	173	chr3	101261612	101261698	protein_coding	Igsf3	exon	ENSMUSG00000042035	ProperStrand	73	1	-10.7944
chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr15	86083663	86083679	protein_coding	Tbc1d22a	intron	ENSMUSG00000051864	ProperStrand	15	1	-9.2502
chr8	90305732	90305816	protein_coding	Zfp423	exon	ENSMUSG00000045333	ProperStrand	33	chr3	123210896	123210974	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.0977
chr15	99016408	99016488	protein_coding	Spats2	exon	ENSMUSG00000051934	ProperStrand	71	chr9	120039646	120039682	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.0149
chr8	109525501	109525591	protein_coding	Sntb2	exon	ENSMUSG00000041308	ProperStrand	41	chr4	131908810	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.7814
chr9	15119967	15120040	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	chr11	69481332	69481453	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	6	-0.7058
chr5	33972059	33972109	protein_coding	Fam53a	utr5	ENSMUSG00000037339	ProperStrand	18	chr1	181027187	181027205	protein_coding	Smyd3	intron	ENSMUSG00000055067	ProperStrand	231	1	-13.0562
chr7	58851580	58851597	protein_coding	Ano5	utr3	ENSMUSG00000055489	ProperStrand	13	chr7	116663729	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-5.3924
chr15	96193083	96193127	protein_coding	Arid2	exon	ENSMUSG00000033237	ProperStrand	34	chr16	23111686	23111720	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-7.4340
chr2	126623498	126623588	protein_coding	Trpm7	exon	ENSMUSG00000027365	ProperStrand	34	chr7	116663689	116663769	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-8.8273
chr2	127657522	127657546	protein_coding	Bub1	utr5	ENSMUSG00000027379	ProperStrand	26	chr1	162968213	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	3	-19.3643
chr5	92502294	92512634	protein_coding	G3bp2	utr5	ENSMUSG00000029405	ProperStrand	78	chr10	90581070	90581153	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-4.3052
chr5	138608386	138608432	protein_coding	Mcm7	exon	ENSMUSG00000029730	ProperStrand	258	chr7	52381972	52382013	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-3.8917
chr8	109193003	109193058	protein_coding	Cdh1	utr3	ENSMUSG00000000303	ProperStrand	283	chr2	73747432	73747938	protein_coding	Atp5g3	exon	ENSMUSG00000018770	ProperStrand	41	1	-10.9720
chr10	127647551	127647631	protein_coding	Spryd4	utr3	ENSMUSG00000051346	ProperStrand	3	chr12	106269350	106269440	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-10.4002
chr17	14085540	14085557	protein_coding	Gm7168	exon	ENSMUSG00000067941	NonProperStrand	1	chr7	117190017	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-inf
chr4	132530097	132530117	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	chr1	162966189	162966258	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-3.9703
chr12	29316603	29318696	protein_coding	Rps7	exon	ENSMUSG00000061477	ProperStrand	129	chr17	35088957	35089016	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	18	-inf
chr8	24290581	24290597	protein_coding	Agpat6	exon	ENSMUSG00000031545	ProperStrand	11	chr16	23111397	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-7.1274
chr11	116016097	116016113	protein_coding	Fbf1	exon	ENSMUSG00000020776	NonProperStrand	36	chr15	36528058	36528755	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	1	-8.9083
chr8	73420145	73420183	protein_coding	Rpl18a	exon	ENSMUSG00000045128	ProperStrand	394	chr1	43132316	43132332	protein_coding	Tgfbrap1	exon	ENSMUSG00000070939	ProperStrand	29	1	-11.0119
chr16	30584732	30584803	protein_coding	Lsg1	intron	ENSMUSG00000022538	ProperStrand	25	chr7	51505224	51505308	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	6	-19.1284
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr5	126150083	126150100	protein_coding	Tmem132b	intron	ENSMUSG00000070498	ProperStrand	6	1	-12.4919
chr16	20126986	20127017	protein_coding	Klhl24	utr3	ENSMUSG00000062901	ProperStrand	212	chr11	6428059	6428149	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.1633
chr8	91343853	91343872	DNA	Charlie10	MER1_type	chr8Charlie1091343828	ProperStrand	23	chr2	158182233	158182298	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-6.8982
chr9	120038467	120038673	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	chr4	131865378	131865516	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	40	-0.9503
chr10	62271396	62302667	protein_coding	Tet1	utr3	ENSMUSG00000047146	ProperStrand	286	chr10	23505153	23505282	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	8	-2.6032
chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	3	-3.3566
chr10	53255277	53255295	SINE	B4A	B4	chr10B4A53255267	ProperStrand	1	chr5	135096271	135096314	protein_coding	Eif4h	utr3	ENSMUSG00000040731	ProperStrand	46	1	-inf
chr17	34167943	34167976	protein_coding	Slc39a7	exon	ENSMUSG00000024327	ProperStrand	39	chr4	131908317	131908336	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.0833
chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	chr14	33005065	33005092	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-1.0643
chr2	152223562	152223660	protein_coding	Sox12	utr5	ENSMUSG00000051817	ProperStrand	31	chr17	27888529	27888546	protein_coding	D17Wsu92e	utr3	ENSMUSG00000056692	ProperStrand	61	1	-14.6033
chr2	181283630	181283992	protein_coding	Dnajc5	intron	ENSMUSG00000000826	ProperStrand	14	chr5	123811223	123811303	protein_coding	Bcl7a	exon	ENSMUSG00000029438	ProperStrand	27	1	-17.8220
chr8	72704740	72704859	protein_coding	Tmem161a	exon	ENSMUSG00000002342	ProperStrand	42	chr19	8798779	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-5.4950
chr4	12851018	12851037	lincRNA	Gm11818	intron	ENSMUSG00000055963	NonProperStrand	4	chr7	118219582	118219627	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-9.7412
chrX	148066931	148066959	protein_coding	Phf8	utr3	ENSMUSG00000041229	ProperStrand	17	chr2	178148094	178148112	protein_coding	Ppp1r3d	exon	ENSMUSG00000049999	ProperStrand	6	1	-20.8723
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr15	36538395	36538417	protein_coding	Pabpc1	utr5	ENSMUSG00000022283	ProperStrand	908	1	-1.1351
chr11	113549649	113549696	protein_coding	D11Wsu47e	exon	ENSMUSG00000041623	ProperStrand	6	chr8	73419657	73419757	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-7.7047
chr14	21143694	21143734	protein_coding	Ecd	exon	ENSMUSG00000021810	ProperStrand	22	chr4	131908236	131908342	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-10.8249
chr17	26644594	26644612	protein_coding	Dusp1	exon	ENSMUSG00000024190	ProperStrand	16	chr4	131865855	131865904	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-10.1729
chr8	87525135	87525238	protein_coding	Hook2	exon	ENSMUSG00000052566	ProperStrand	204	chr5	121655104	121655129	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-1.6497
chr6	112689098	112689322	protein_coding	Srgap3	exon	ENSMUSG00000030257	NonProperStrand	208	chr5	151755616	151755632	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-5.2903
chr15	81479810	81479900	protein_coding	Ep300	exon	ENSMUSG00000055024	ProperStrand	118	chr10	90581057	90581137	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-3.5316
chr8	113658582	113658652	protein_coding	Pdpr	exon	ENSMUSG00000033624	ProperStrand	49	chr4	143027927	143028559	protein_coding	Oog4	exon	ENSMUSG00000047799	NonProperStrand	99	1	-12.7181
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr11	103059065	103059081	protein_coding	Fmnl1	exon	ENSMUSG00000055805	ProperStrand	26	1	-10.6153
chr7	4960506	4960624	protein_coding	Fiz1	exon	ENSMUSG00000061374	ProperStrand	37	chr7	117190046	117190068	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-7.1701
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr18	24762479	24762551	protein_coding	Elp2	utr5	ENSMUSG00000024271	ProperStrand	46	1	-6.4284
chr11	32633576	32635168	protein_coding	Fbxw11	exon	ENSMUSG00000020271	ProperStrand	36	chr6	71832604	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-6.6205
chr2	128460183	128460240	protein_coding	Anapc1	exon	ENSMUSG00000014355	ProperStrand	38	chr1	162968442	162968469	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	4	-21.2243
chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	chr17	6943185	6943240	protein_coding	Ezr	utr3	ENSMUSG00000052397	ProperStrand	126	1	-7.7057
chr4	155125157	155125206	protein_coding	Atad3a	intron	ENSMUSG00000029036	ProperStrand	28	chr11	77994775	77994862	protein_coding	Rpl23a	intron	ENSMUSG00000058546	ProperStrand	121	1	-13.4443
chr6	70014976	70015066	LINE	L1_Mus2	L1	chr6L1_Mus270014988	ProperStrand	1	chr6	70014862	70014952	LTR	IAPEY2_LTR	ERVK	chr6IAPEY2_LTR70014634	ProperStrand	1	1	-inf
chr6	88435731	88435765	protein_coding	Ruvbl1	exon	ENSMUSG00000030079	ProperStrand	24	chr16	23111374	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-4.7906
chr1	172124441	172124541	protein_coding	Uhmk1	utr3	ENSMUSG00000026667	ProperStrand	11	chr8	125626952	125627005	snoRNA	ENSMUSG00000064450_Snord68	.	ENSMUSG00000064450	ProperStrand	181	1	-14.5686
chr15	78813560	78818333	protein_coding	Triobp	utr5	ENSMUSG00000033088	ProperStrand	29	chr8	129468769	129468849	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-5.8296
chr5	124832007	124834509	protein_coding	Sbno1	exon	ENSMUSG00000038095	ProperStrand	134	chr7	52381973	52382013	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-5.1369
chr4	129662259	129662276	protein_coding	Bai2	utr5	ENSMUSG00000028782	ProperStrand	119	chr2	26768049	26768107	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	1	-7.0298
chr18	38413961	38414015	protein_coding	0610009O20Rik	exon	ENSMUSG00000024442	ProperStrand	25	chrX	69185076	69185576	protein_coding	Gm1141	exon	ENSMUSG00000073130	NonProperStrand	1	1	-inf
chr11	102294587	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr19	8963031	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	8	-2.7589
chr5	139714883	139717261	protein_coding	Sun1	exon	ENSMUSG00000036817	ProperStrand	108	chr14	33005038	33005093	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-2.9183
chr19	55573065	55573742	protein_coding	Vti1a	exon	ENSMUSG00000024983	ProperStrand	14	chr7	30042797	30042897	protein_coding	Spint2	intron	ENSMUSG00000074227	ProperStrand	82	1	-15.6589
chr8	87413545	87414660	protein_coding	Gcdh	exon	ENSMUSG00000003809	ProperStrand	10	chr8	129468799	129468879	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-7.9945
chr13	105596840	105597867	protein_coding	Cwc27	exon	ENSMUSG00000021715	ProperStrand	14	chr18	35716810	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.8493
chr11	44333023	44333039	protein_coding	Rnf145	utr5	ENSMUSG00000019189	NonProperStrand	20	chr2	91439467	91439516	protein_coding	Ckap5	exon	ENSMUSG00000040549	ProperStrand	53	1	-15.7761
chr19	57115471	57115487	protein_coding-noncoding	Ablim1	utr3	ENSMUSG00000025085	ProperStrand	20	chr3	104271129	104271168	protein_coding	Lrig2	exon	ENSMUSG00000032913	ProperStrand	10	1	-18.7257
chr8	25920545	25921169	protein_coding	Adam5	exon	ENSMUSG00000031554	ProperStrand	49	chr15	79913300	79913351	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-3.9702
chr5	115248560	115248582	protein_coding	Ankrd13a	exon	ENSMUSG00000041870	ProperStrand	22	chr2	125389949	125389966	protein_coding	Cep152	exon	ENSMUSG00000068394	ProperStrand	60	1	-15.3542
chr2	90235294	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	167932738	167932755	protein_coding	Pou2f1	utr5	ENSMUSG00000026565	ProperStrand	34	1	-5.5655
chr14	75730874	75730890	protein_coding	Zc3h13	exon	ENSMUSG00000022000	NonProperStrand	8	chr16	23111447	23111501	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.8232
chr5	145936369	145936431	protein_coding	Cpsf4	intron	ENSMUSG00000029625	ProperStrand	15	chr17	7964275	7964375	protein_coding	Fndc1	exon	ENSMUSG00000071984	ProperStrand	4	1	-26.3461
chr17	10466896	10475730	protein_coding	Qk	exon	ENSMUSG00000062078	ProperStrand	63	chr11	116938709	116938749	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	4	-18.3823
chr1	120577291	120577370	protein_coding	Tfcp2l1	utr3	ENSMUSG00000026380	ProperStrand	158	chr11	102294588	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	1	-6.9648
chr7	74189892	74189909	protein_coding	Adamts17	intron	ENSMUSG00000058145	NonProperStrand	73	chr15	79913288	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-3.2333
chr8	74899252	74899307	protein_coding	Eps15l1	intron	ENSMUSG00000006276	ProperStrand	42	chr7	117189864	117189954	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-6.9170
chr12	81268805	81325810	protein_coding	Actn1	utr3	ENSMUSG00000015143	ProperStrand	128	chr4	131908236	131908416	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-2.9619
chr9	110497195	110501643	protein_coding	Setd2	exon	ENSMUSG00000044791	ProperStrand	51	chr4	131866169	131866249	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-3.9689
chr15	85705503	85705593	protein_coding	Gtse1	exon	ENSMUSG00000022385	ProperStrand	74	chr14	33005038	33005064	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	3	-8.9171
chr5	123622050	123622066	protein_coding	Hpd	exon	ENSMUSG00000029445	ProperStrand	254	chr12	88778631	88778703	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-3.7188
chr10	59413444	59413531	protein_coding	Ddit4	exon	ENSMUSG00000020108	ProperStrand	49	chr7	148634807	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-4.3699
chr9	108465658	108465784	protein_coding	Impdh2	exon	ENSMUSG00000062867	ProperStrand	74	chr16	23111738	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-6.4382
chr11	106019565	106019623	protein_coding	Limd2	utr3	ENSMUSG00000040699	ProperStrand	8	chr10	110918548	110918638	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-7.4365
chr14	31953025	31953118	protein_coding	Stab1	exon	ENSMUSG00000042286	NonProperStrand	127	chr11	62416582	62416653	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-6.3156
chr7	112533562	112533579	protein_coding	Fam160a2	exon	ENSMUSG00000044465	ProperStrand	85	chr10	110918520	110918623	protein_coding	Nap1l1	intron	ENSMUSG00000058799	ProperStrand	185	4	-19.5626
chr12	77383922	77383953	protein_coding	Mthfd1	exon	ENSMUSG00000021048	ProperStrand	71	chr10	23505152	23505252	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.0125
chr4	64785559	64785575	protein_coding	Pappa	utr5	ENSMUSG00000028370	ProperStrand	65	chr11	62416601	62416656	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-8.2622
chr14	51427146	51427226	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr3	121158005	121160083	protein_coding	Cnn3	exon	ENSMUSG00000053931	ProperStrand	77	1	-6.7140
chr2	38012954	38012970	protein_coding	Dennd1a	intron	ENSMUSG00000035392	NonProperStrand	128	chr7	3609988	3610247	protein_coding	Cnot3	exon	ENSMUSG00000035632	ProperStrand	55	1	-11.9675
chr9	40041363	40041463	SINE	MIR	MIR	chr9MIR40041299	ProperStrand	1	chr10	23505152	23505204	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-inf
chr1	181555276	181555340	protein_coding	Cnst	utr3	ENSMUSG00000038949	ProperStrand	40	chr14	76247712	76247753	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-4.9502
chr2	4484229	4484309	protein_coding	Frmd4a	intron	ENSMUSG00000026657	NonProperStrand	16	chr3	127007140	127007230	protein_coding	Ank2	intron	ENSMUSG00000032826	ProperStrand	30	1	-17.4765
chr4	99602398	99634104	protein_coding	Pgm2	exon	ENSMUSG00000025791	ProperStrand	43	chr17	35089182	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	5	-18.9664
chr15	15189059	15189149	SINE	B4A	B4	chr15B4A15189021	NonProperStrand	1	chr16	43103517	43103597	protein_coding	Zbtb20	intron	ENSMUSG00000022708	NonProperStrand	13	1	-inf
chr14	51427119	51427359	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr1	88247741	88247876	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	2	-0.8062
chr19	6984448	6984464	protein_coding	Prdx5	utr5	ENSMUSG00000024953	ProperStrand	24	chr7	116664807	116664897	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-4.2269
chr3	96791938	96791956	protein_coding	Gja5	intron	ENSMUSG00000057123	NonProperStrand	2	chr3	68889051	68889151	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-10.5388
chr9	72177255	72177318	protein_coding	Zfp280d	intron	ENSMUSG00000038535	ProperStrand	11	chrX	34622918	34623008	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-6.4685
chr11	100581379	100581396	protein_coding	Rab5c	utr5	ENSMUSG00000019173	ProperStrand	76	chr11	100343574	100345100	protein_coding	Acly	exon	ENSMUSG00000020917	ProperStrand	183	1	-10.6008
chr2	25105521	25107254	protein_coding	Ndor1	exon	ENSMUSG00000006471	NonProperStrand	84	chr8	73419729	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-4.4648
chr4	155562514	155562604	protein_coding	Agrn	intron	ENSMUSG00000041936	ProperStrand	175	chr7	52381718	52381798	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-5.4637
chr4	43505657	43505681	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr13	6591516	6591561	protein_coding	Pfkp	intron	ENSMUSG00000021196	ProperStrand	197	1	-1.1704
chrX	70175053	70194513	protein_coding	Nsdhl	exon	ENSMUSG00000031349	ProperStrand	10	chr8	113495721	113495738	protein_coding	St3gal2	utr3	ENSMUSG00000031749	NonProperStrand	9	1	-19.9862
chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	chr7	36279349	36286432	protein_coding	Tdrd12	exon	ENSMUSG00000030491	ProperStrand	6	1	-14.8348
chr5	50449916	50449971	protein_coding	Gpr125	exon	ENSMUSG00000029090	ProperStrand	29	chr8	129468746	129468798	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-5.8296
chr4	78999677	78999698	LTR	MYSERV6-int	ERVK	chr4MYSERV6-int78999395	ProperStrand	1	chrX	7473528	7475682	protein_coding	Pqbp1	exon	ENSMUSG00000031157	ProperStrand	22	1	-inf
chr1	179374793	179374837	protein_coding	Zfp238	utr5	ENSMUSG00000063659	ProperStrand	2	chr4	116828376	116828435	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-15.8656
chr11	6302811	6302863	protein_coding	Zmiz2	exon	ENSMUSG00000041164	ProperStrand	69	chr19	8963115	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	5	-10.1179
chr14	20622275	20622355	protein_coding	Nid2	exon	ENSMUSG00000021806	ProperStrand	372	chr1	89673695	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	2	-1.2095
chr17	24795090	24795109	protein_coding	Npw	exon	ENSMUSG00000071230	NonProperStrand	1	chr16	23110943	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr11	59203833	59203860	LINE	Lx9	L1	chr11Lx959203803	NonProperStrand	1	chr16	23110862	23110960	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr17	8720218	8720234	protein_coding	Pde10a	intron	ENSMUSG00000023868	ProperStrand	25	chr11	68886975	68887034	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-5.8454
chr3	151939340	151939409	protein_coding	Fam73a	utr3	ENSMUSG00000054942	ProperStrand	34	chr9	120038563	120038653	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.0893
chr2	160191558	160191574	protein_coding	Mafb	exon	ENSMUSG00000074622	ProperStrand	31	chr17	24665420	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	5	-19.6932
chr18	7462559	7462580	protein_coding	Mpp7	intron	ENSMUSG00000057440	ProperStrand	7	chr7	116664841	116664901	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-6.7161
chr9	78326631	78329450	protein_coding	Eef1a1	utr5	ENSMUSG00000037742	ProperStrand	1990	chr7	52382237	52382314	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	8	-16.0101
chr2	90235318	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	60692417	60692433	protein_coding	Adamts14	exon	ENSMUSG00000059901	NonProperStrand	127	1	-3.0717
chr17	34324656	34324673	protein_coding	Psmb9	utr5	ENSMUSG00000024337	ProperStrand	60	chr4	131908391	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.4187
chr4	57277695	57277773	protein_coding	Ptpn3	intron	ENSMUSG00000038764	ProperStrand	48	chr16	23110968	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.1542
chr12	29316603	29318686	protein_coding	Rps7	exon	ENSMUSG00000061477	ProperStrand	129	chr9	15119322	15119402	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-3.6557
chr3	88125424	88125514	protein_coding	Cct3	utr3	ENSMUSG00000001416	ProperStrand	82	chr9	40612833	40612913	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	1	-8.9174
chr6	122282596	122282679	protein_coding	Phc1	exon	ENSMUSG00000040669	NonProperStrand	31	chr9	114420570	114420637	protein_coding	Trim71	utr3	ENSMUSG00000079259	NonProperStrand	11	1	-17.8251
chr2	132089190	132131343	protein_coding	Cds2	exon	ENSMUSG00000058793	ProperStrand	47	chr11	69483136	69483277	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-7.4257
chr14	122874945	122874963	protein_coding	Zic2	exon	ENSMUSG00000061524	NonProperStrand	2	chr7	116664872	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-9.7350
chr8	71418533	71418607	protein_coding	Lpl	exon	ENSMUSG00000015568	ProperStrand	11	chr1	162966208	162966254	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	2	-17.5264
chr1	6239810	6239923	protein_coding	Rb1cc1	exon	ENSMUSG00000025907	ProperStrand	13	chr16	23110970	23110993	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-4.2316
chr5	28740112	28740168	protein_coding	Rbm33	utr3	ENSMUSG00000048271	ProperStrand	78	chr3	108357357	108357457	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-4.0419
chr15	92635158	92635174	LINE	L1MA4	L1	chr15L1MA492634889	NonProperStrand	27	chr17	32338043	32338090	protein_coding	Brd4	exon	ENSMUSG00000024002	ProperStrand	121	1	-13.5227
chr2	102480115	102480132	protein_coding	Pamr1	intron	ENSMUSG00000027188	NonProperStrand	2	chr12	112779146	112779210	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-12.1663
chr19	9018593	9020258	protein_coding	Mta2	exon	ENSMUSG00000071646	ProperStrand	70	chr17	24665419	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-4.6438
chr11	84042523	84064779	protein_coding	Acaca	exon	ENSMUSG00000020532	ProperStrand	100	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	2	-10.8428
chr9	78326786	78328454	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr15	5068428	5068479	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	2	-0.8868
chr8	82235477	82235506	protein_coding	Abce1	utr5	ENSMUSG00000058355	ProperStrand	66	chr4	131908236	131908298	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-3.9052
chr2	144708809	144708825	LTR	MLT1A0	MaLR	chr2MLT1A0144708556	ProperStrand	9	chr9	64928660	64928697	protein_coding	Dpp8	utr3	ENSMUSG00000032393	ProperStrand	31	1	-17.9559
chr4	131908810	131908892	lincRNA	Gm17300	exon	ENSMUSG00000091021	ProperStrand	109	chr11	102294588	102294611	protein_coding	Grn	exon	ENSMUSG00000034708	ProperStrand	43	1	-12.7872
chr5	67785065	67785105	protein_coding	Bend4	utr3	ENSMUSG00000092060	ProperStrand	56	chr15	34370544	34370644	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-3.6769
chr16	94748041	94748141	protein_coding	Dscr3	utr5	ENSMUSG00000022898	ProperStrand	8	chr16	23110968	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.2180
chr5	148343872	148343909	protein_coding	Pan3	intron	ENSMUSG00000029647	ProperStrand	57	chr17	24665420	24665481	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-5.0400
chr12	17552949	17553071	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr15	5068428	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	7	-2.5293
chr2	84884571	84885632	protein_coding	Ssrp1	exon	ENSMUSG00000027067	ProperStrand	118	chr8	32260335	32260370	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-3.3625
chr1	89091564	89092064	protein_coding	Chrnd	exon	ENSMUSG00000026251	ProperStrand	32	chr15	34370660	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-4.7407
chr1	62863549	62863588	protein_coding	Nrp2	utr3	ENSMUSG00000025969	NonProperStrand	4	chr1	63225653	63225706	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-12.3232
chr7	27947456	27947487	protein_coding	Egln2	intron	ENSMUSG00000058709	ProperStrand	15	chr15	34370545	34370668	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-6.2440
chr7	133637823	133637959	protein_coding	Atxn2l	exon	ENSMUSG00000032637	ProperStrand	219	chr3	88715213	88715230	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-4.7004
chr5	100855902	100855974	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr2	32818804	32818894	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	4	-1.9767
chr11	55296280	55296333	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	chr2	32818840	32818941	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	19	-19.2946
chr11	120148960	120148976	protein_coding	Bahcc1	exon	ENSMUSG00000039741	NonProperStrand	268	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-3.0379
chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	chr9	44196599	44196667	protein_coding	Hyou1	exon	ENSMUSG00000032115	ProperStrand	145	1	-7.3047
chr9	78326650	78326792	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr11	50766093	50766110	protein_coding	Prop1	intron	ENSMUSG00000044542	ProperStrand	4	1	-11.9830
chr2	126839916	126845033	protein_coding	Ap4e1	exon	ENSMUSG00000001998	ProperStrand	7	chr19	8798741	8798777	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-9.1562
chr2	154069546	154069626	LTR	RLTR16	ERVK	chr2RLTR16154069344	NonProperStrand	1	chr2	154061713	154061803	protein_coding	Bpifb5	intron	ENSMUSG00000038572	ProperStrand	1	1	-inf
chr16	4886395	4886411	protein_coding	Mgrn1	exon	ENSMUSG00000022517	NonProperStrand	157	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-1.9244
chr1	53814190	53814207	protein_coding	Stk17b	utr3	ENSMUSG00000026094	NonProperStrand	3	chr18	33954823	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-9.7168
chr5	130295414	130295508	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	chr8	113366285	113366328	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	5	-8.3432
chr2	90235285	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	39978273	39978484	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	12	-2.4869
chr5	135632378	135633412	protein_coding	Tbl2	exon	ENSMUSG00000005374	ProperStrand	28	chr17	35088970	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-7.3840
chr9	15514257	15514276	protein_coding	Slc36a4	exon	ENSMUSG00000043885	ProperStrand	94	chr3	108357255	108357293	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-3.6936
chr1	120841527	120920187	protein_coding	Gli2	intron	ENSMUSG00000048402	ProperStrand	148	chr7	117189866	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-3.2817
chr2	166855146	166856908	protein_coding	Ddx27	exon	ENSMUSG00000017999	ProperStrand	55	chr12	17552949	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	13	-19.1131
chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	chr2	91613185	91613203	protein_coding	Ambra1	exon	ENSMUSG00000040506	ProperStrand	65	1	-9.2368
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr7	117166747	117166859	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	2	-2.0951
chr19	45879001	45879080	protein_coding	Kcnip2	intron	ENSMUSG00000025221	NonProperStrand	6	chr19	45893445	45893535	protein_coding	9130011E15Rik	intron	ENSMUSG00000039901	ProperStrand	129	1	-16.5023
chr11	6304187	6304230	protein_coding	Zmiz2	exon	ENSMUSG00000041164	ProperStrand	69	chr19	8798775	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-4.5327
chr6	92104375	92104391	protein_coding	Nr2c2	exon	ENSMUSG00000005893	ProperStrand	101	chr9	108847450	108849006	protein_coding	Uqcrc1	exon	ENSMUSG00000025651	ProperStrand	43	1	-12.9418
chr4	57876722	57876822	protein_coding	Akap2	intron	ENSMUSG00000038729	ProperStrand	14	chrX	34622906	34622949	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-5.9758
chr2	79843543	79843559	protein_coding	Pde1a	intron	ENSMUSG00000059173	NonProperStrand	275	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-2.4075
chr7	134671421	134671511	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	chr11	116938557	116938637	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-1.3038
chr6	81909502	81909523	protein_coding	Mrpl19	utr3	ENSMUSG00000030045	ProperStrand	4	chr16	23111451	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-6.3168
chr7	19633844	19637844	protein_coding	Sympk	exon	ENSMUSG00000023118	ProperStrand	43	chr7	29136611	29136653	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	6	-16.3021
chr15	44504363	44504382	protein_coding	Sybu	exon	ENSMUSG00000022340	NonProperStrand	28	chr7	117190015	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.7726
chr5	123610651	123610699	protein_coding	Setd1b	exon	ENSMUSG00000038384	ProperStrand	11	chr16	23111374	23111464	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.1830
chr7	28154412	28154502	protein_coding	Spnb4	exon	ENSMUSG00000011751	ProperStrand	39	chr2	51965502	51965582	protein_coding	Rif1	exon	ENSMUSG00000036202	ProperStrand	201	1	-11.7572
chr13	23831104	23831132	protein_coding	Hist1h1c	exon	ENSMUSG00000036181	ProperStrand	99	chr1	89673606	89673696	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-2.3841
chr13	54726898	54726998	protein_coding	Faf2	intron	ENSMUSG00000025873	NonProperStrand	4	chr9	120039544	120039612	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	NonProperStrand	24	2	-22.7098
chr17	45708425	45708473	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr4	116862585	116862661	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	1	-2.5198
chr11	104218093	104218124	protein_coding	1700081L11Rik	exon	ENSMUSG00000018412	ProperStrand	73	chr4	131908809	131908876	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-1.9322
chr2	59795767	59796532	protein_coding	Baz2b	exon	ENSMUSG00000026987	ProperStrand	15	chr14	76247721	76247821	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-6.9035
chr13	73463407	73463423	protein_coding	Ndufs6	intron	ENSMUSG00000021606	NonProperStrand	52	chr11	116704532	116704549	protein_coding	Jmjd6	utr5	ENSMUSG00000056962	ProperStrand	92	1	-12.7446
chr6	41636403	41636419	protein_coding	Kel	utr3	ENSMUSG00000029866	NonProperStrand	10	chr16	23110459	23110579	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	4	-18.8645
chr17	35973210	35973654	protein_coding	Tubb5	exon	ENSMUSG00000001525	ProperStrand	624	chr15	79908946	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	8	-13.8202
chr1	92949256	92949273	protein_coding	Lrrfip1	intron	ENSMUSG00000026305	NonProperStrand	8	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.4974
chr16	91625725	91628297	protein_coding	Gart	exon	ENSMUSG00000022962	ProperStrand	200	chr12	106269284	106269384	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-2.0080
chr12	85782473	85782553	protein_coding	Aldh6a1	intron	ENSMUSG00000021238	ProperStrand	6	chr11	58607300	58607390	protein_coding	Fam183b	intron	ENSMUSG00000049154	ProperStrand	1	1	-inf
chr19	46022236	46022252	protein_coding	9130011E15Rik	intron	ENSMUSG00000039901	ProperStrand	129	chrX	12325558	12325604	protein_coding	Med14	exon	ENSMUSG00000064127	ProperStrand	4	1	-17.4555
chr14	121332534	121346545	protein_coding	Ipo5	utr3	ENSMUSG00000030662	ProperStrand	135	chr11	6428062	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	4	-7.0783
chr9	40611925	40612015	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chrX	71517832	71517912	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-1.7902
chr2	119595681	119595748	protein_coding	Rpap1	exon	ENSMUSG00000034032	ProperStrand	96	chr2	26493400	26493490	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-2.8886
chr1	60409782	60409803	protein_coding	Cyp20a1	exon	ENSMUSG00000049439	ProperStrand	7	chr16	23110901	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-17.2005
chr10	90624863	90624938	protein_coding	Tmpo	exon	ENSMUSG00000019961	ProperStrand	57	chr11	68887037	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	3	-10.2494
chr4	141587615	141587631	protein_coding	Tmem51	exon	ENSMUSG00000040616	ProperStrand	30	chr19	8963086	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-5.9896
chrX	138824835	138824870	protein_coding	Acsl4	utr5	ENSMUSG00000031278	ProperStrand	31	chr12	110925011	110925066	snoRNA	ENSMUSG00000064726_SNORD113	.	ENSMUSG00000064726	ProperStrand	42	1	-15.3499
chr2	130103751	130103781	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	chr17	26360446	26360536	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	1	-5.2371
chr2	130103751	130103782	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	chr11	51551280	51551390	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	5	-13.2894
chr4	137071577	137105990	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	chr5	121655025	121655126	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	4	-1.5217
chr3	89354340	89354357	protein_coding	Kcnn3	intron	ENSMUSG00000000794	NonProperStrand	38	chr5	108336363	108336411	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-5.7729
chr2	31279995	31280710	protein_coding	Hmcn2	exon	ENSMUSG00000055632	ProperStrand	20	chr18	33954835	33954925	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	6	-19.4050
chr8	13416895	13416912	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr19	39917317	39917333	protein_coding	Cyp2c69	utr3	ENSMUSG00000092008	NonProperStrand	83	1	-5.8152
chr11	69547787	69547877	protein_coding	Polr2a	utr3	ENSMUSG00000005198	ProperStrand	200	chr4	131866169	131866249	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-1.6125
chr1	133141328	133141344	protein_coding	Rassf5	exon	ENSMUSG00000026430	ProperStrand	73	chr17	24857759	24857849	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.9753
chr19	4800070	4800160	protein_coding	Rbm14	intron	ENSMUSG00000006456	ProperStrand	84	chr8	26827320	26827337	protein_coding	Whsc1l1	utr3	ENSMUSG00000054823	NonProperStrand	17	2	-inf
chr11	79923574	79925003	protein_coding	Atad5	exon	ENSMUSG00000017550	ProperStrand	5	chr15	34370583	34370663	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-8.5662
chr1	182836799	182836899	protein_coding	Pycr2	intron	ENSMUSG00000026520	ProperStrand	89	chrX	34622906	34622949	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-2.4781
chr11	95136004	95136104	protein_coding	Myst2	utr3	ENSMUSG00000038909	ProperStrand	56	chr15	79908929	79908975	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-5.6076
chr2	144087316	144087353	protein_coding	Snx5	intron	ENSMUSG00000027423	ProperStrand	64	chr18	75178612	75202806	protein_coding	Dym	utr5	ENSMUSG00000035765	ProperStrand	22	1	-15.2065
chr5	135853621	135853670	protein_coding	Pom121	utr3	ENSMUSG00000053293	ProperStrand	127	chr9	120038564	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.7786
chr10	12175198	12175263	protein_coding	Utrn	exon	ENSMUSG00000019820	ProperStrand	69	chr1	71672808	71673741	protein_coding	Fn1	exon	ENSMUSG00000026193	NonProperStrand	10	1	-16.6406
chr1	53250170	53250192	protein_coding	Pms1	intron	ENSMUSG00000026098	ProperStrand	16	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-10.4162
chr15	98682993	98683093	protein_coding	Mll2	exon	ENSMUSG00000048154	ProperStrand	170	chr7	52378401	52378479	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	4	-19.2230
chr13	96374713	96374729	protein_coding	F2r	exon	ENSMUSG00000048376	NonProperStrand	88	chr12	106269284	106269349	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-3.4273
chr4	56884479	56884510	protein_coding	D730040F13Rik	utr3	ENSMUSG00000055296	ProperStrand	48	chr4	131908688	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-4.5185
chr4	140483047	140487993	protein_coding	Padi2	exon	ENSMUSG00000028927	ProperStrand	24	chr10	23505231	23505255	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.6868
chr8	113692638	113782864	protein_coding	Glg1	exon	ENSMUSG00000003316	ProperStrand	83	chr9	120038576	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-4.3608
chr7	116663696	116663759	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	chr10	90644840	90644912	tRNA	tRNA856-AspGTC	.	63676	ProperStrand	65	1	-2.3755
chr11	72263164	72263254	protein_coding-noncoding	Mybbp1a	utr5	ENSMUSG00000040463	ProperStrand	1	chr11	72263133	72263213	protein_coding	Mybbp1a	intron	ENSMUSG00000040463	ProperStrand	279	1	-inf
chr4	140723745	140723761	protein_coding	Fbxo42	exon	ENSMUSG00000028920	ProperStrand	91	chr11	102118099	102118144	protein_coding	BC030867	intron	ENSMUSG00000034773	ProperStrand	10	1	-16.1221
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr11	97642952	97643061	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	6	-5.2805
chr7	13516143	13516213	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr16	23110871	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	28	-1.4226
chr1	39605591	39605695	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	chr18	33954815	33954954	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	7	-1.7602
chr1	39738945	39738965	protein_coding	Rfx8	intron	ENSMUSG00000057173	ProperStrand	4	chr2	158185585	158185653	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-12.1370
chr7	34992758	34999664	protein_coding	Gpi1	exon	ENSMUSG00000036427	ProperStrand	288	chr11	97642967	97643062	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-1.5909
chr10	66688710	66688762	protein_coding	Jmjd1c	exon	ENSMUSG00000037876	ProperStrand	110	chr10	39978419	39978484	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	3	-10.3210
chr2	168426892	168426911	protein_coding	Nfatc2	intron	ENSMUSG00000027544	NonProperStrand	49	chr4	116826698	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-7.1844
chr6	115755624	115755682	protein_coding	Rpl32	exon	ENSMUSG00000057841	ProperStrand	137	chr4	148608847	148608864	protein_coding	Kif1b	utr3	ENSMUSG00000063077	NonProperStrand	19	1	-13.9917
chr8	123194362	123194380	protein_coding	Cox4i1	intron	ENSMUSG00000031818	NonProperStrand	1	chr9	15119287	15119353	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-inf
chr15	77801165	77801231	protein_coding	Eif3d	utr5	ENSMUSG00000016554	ProperStrand	69	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-8.6466
chr17	57202112	57202184	protein_coding	Crb3	utr5	ENSMUSG00000044279	ProperStrand	11	chr7	116663634	116663724	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-9.4787
chr13	19684241	19684258	protein_coding	Epdr1	utr3	ENSMUSG00000002808	ProperStrand	46	chr12	114390414	114390431	protein_coding	Crip1	intron	ENSMUSG00000006360	ProperStrand	8	2	-19.7490
chr3	101387685	101387711	protein_coding	Atp1a1	exon	ENSMUSG00000033161	ProperStrand	316	chr11	97643080	97643122	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	3	-10.9299
chr11	96689060	96689150	protein_coding	Nfe2l1	utr5	ENSMUSG00000038615	ProperStrand	118	chrX	34622929	34623009	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-2.0108
chr13	3537431	3537516	protein_coding	Gdi2	utr5	ENSMUSG00000021218	ProperStrand	49	chr13	108949053	108950845	protein_coding	Ercc8	utr5	ENSMUSG00000021694	ProperStrand	2	1	-inf
chr18	24363855	24363872	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr17	39985146	39985236	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	2	-6.8125
chrX	148238029	148241279	protein_coding	Huwe1	utr5	ENSMUSG00000025261	ProperStrand	501	chr18	35714248	35714290	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	6	-4.6307
chr19	14671268	14671881	protein_coding	Tle4	exon	ENSMUSG00000024642	ProperStrand	23	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-7.7812
chr4	59345816	59345833	protein_coding	Susd1	exon	ENSMUSG00000038578	ProperStrand	10	chr4	131908815	131908871	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.3231
chr17	45708512	45708757	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr1	172975116	172975189	tRNA	tRNA699-GlyGCC	.	1006381	ProperStrand	660	1	-2.2442
chr1	183848597	183853704	protein_coding	Enah	exon	ENSMUSG00000022995	ProperStrand	196	chr5	74489595	74489677	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	7	-13.6063
chr17	46398418	46398498	protein_coding	Tjap1	exon	ENSMUSG00000012296	ProperStrand	11	chr4	57058991	57059081	protein_coding	Epb4.1l4b	intron	ENSMUSG00000028434	ProperStrand	12	1	-inf
chr4	137952386	137952403	protein_coding	AB041806	utr3	ENSMUSG00000046109	ProperStrand	2	chr19	8798484	8798520	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-12.6199
chr13	58338411	58340018	protein_coding	Gkap1	exon	ENSMUSG00000021552	ProperStrand	22	chr5	121655029	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	6	-inf
chr18	35102297	35102366	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	chr4	41158540	41158608	snoRNA	ENSMUSG00000089308_SNORD121A	.	ENSMUSG00000089308	ProperStrand	209	1	-4.1701
chr10	79322543	79322604	protein_coding	Ptbp1	exon	ENSMUSG00000006498	ProperStrand	129	chr6	120338060	120338076	protein_coding	Kdm5a	exon	ENSMUSG00000030180	ProperStrand	57	3	-18.8839
chr7	147172356	147172636	protein_coding	Adam8	exon	ENSMUSG00000025473	NonProperStrand	5	chr3	68889026	68889126	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-8.2464
chr11	45701028	45704189	protein_coding	Clint1	exon	ENSMUSG00000006169	ProperStrand	19	chr9	120039545	120039623	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-5.5217
chr11	117152118	117152208	protein_coding	Sept9	exon	ENSMUSG00000059248	ProperStrand	60	chr10	90581059	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-4.8072
chr15	77794479	77794502	protein_coding	Eif3d	exon	ENSMUSG00000016554	ProperStrand	69	chr9	15118332	15118375	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.2118
chr2	90235286	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	163146316	163146333	protein_coding	Tox2	exon	ENSMUSG00000074607	NonProperStrand	6	2	-14.7648
chr5	151585628	151590890	protein_coding	Pds5b	exon	ENSMUSG00000034021	ProperStrand	21	chr11	97643011	97643091	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.3990
chr7	126116033	126116057	protein_coding	Gprc5b	utr3	ENSMUSG00000008734	ProperStrand	7	chr3	123210854	123210923	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-6.1463
chr14	31927099	31927153	protein_coding	Pbrm1	exon	ENSMUSG00000042323	ProperStrand	87	chr11	77996560	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	8	-19.3009
chr6	38459914	38459994	protein_coding	Ubn2	utr3	ENSMUSG00000038538	ProperStrand	86	chr11	6428060	6428150	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.5568
chr12	29540067	29540167	protein_coding	Tssc1	intron	ENSMUSG00000036613	ProperStrand	8	chr16	23110966	23111003	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.2180
chr9	110140589	110140612	protein_coding	Smarcc1	utr3	ENSMUSG00000032481	ProperStrand	108	chr1	157780228	157780244	protein_coding	Cep350	exon	ENSMUSG00000033671	ProperStrand	48	1	-12.5824
chr8	83829970	83829986	LINE	L1MC1	L1	chr8L1MC183829905	NonProperStrand	1	chr9	15119665	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-inf
chr13	60735193	60735211	protein_coding	Dapk1	intron	ENSMUSG00000021559	NonProperStrand	40	chr4	131865855	131865987	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.4299
chr15	98356832	98356912	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	chr7	16524110	16524200	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	1	-4.2495
chr16	91729698	91729723	protein_coding	Itsn1	utr5	ENSMUSG00000022957	ProperStrand	172	chr7	24713726	24713742	protein_coding	Vmn1r179	exon	ENSMUSG00000046924	NonProperStrand	69	1	-10.9190
chr19	6261807	6261824	protein_coding	Atg2a	exon	ENSMUSG00000024773	ProperStrand	97	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-5.6459
chr12	33505266	33505304	protein_coding	Nampt	utr5	ENSMUSG00000020572	ProperStrand	15	chr1	162965560	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.9503
chr8	71344622	71344712	protein_coding	Ints10	exon	ENSMUSG00000031864	ProperStrand	28	chr16	23110888	23110968	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.1386
chr2	89368463	89368480	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	chr11	69481333	69481407	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-0.9025
chr10	105278600	105278616	protein_coding	Ccdc59	exon	ENSMUSG00000019897	ProperStrand	21	chr19	48036886	48036904	protein_coding	Ccdc147	exon	ENSMUSG00000046585	NonProperStrand	3	1	-inf
chr16	44157812	44157902	protein_coding	Naa50	intron	ENSMUSG00000022698	ProperStrand	56	chr7	116664794	116664874	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-4.6761
chr3	85918764	85920752	protein_coding	Sh3d19	exon	ENSMUSG00000028082	ProperStrand	58	chr7	118219574	118219616	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-4.2347
chr8	87445858	87445964	protein_coding	Dnase2a	intron	ENSMUSG00000003812	ProperStrand	8	chr6	93765818	93862891	protein_coding	Magi1	intron	ENSMUSG00000045095	NonProperStrand	47	2	-inf
chr4	107704715	107704735	protein_coding	Podn	intron	ENSMUSG00000028600	NonProperStrand	1	chr5	74489542	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-inf
chr11	62416575	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	chr9	64023677	64023699	snoRNA	ENSMUSG00000064918_SNORD18	.	ENSMUSG00000064918	ProperStrand	370	5	-9.4391
chr8	98248491	98249930	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	chr15	34370577	34370657	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-0.9118
chr3	89750435	89750451	protein_coding	Atp8b2	exon	ENSMUSG00000060671	ProperStrand	140	chr7	29136553	29136585	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.0853
mmu-miR-1949	3	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr10	20045190	20045217	protein_coding	Bclaf1	exon	ENSMUSG00000037608	ProperStrand	83	1	-7.5015
chr1	88253644	88253703	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chr8	97227897	97227940	tRNA	tRNA1008-LeuCAG	.	108193	ProperStrand	18	1	-9.7884
chr6	104552704	104552726	protein_coding	Cntn6	intron	ENSMUSG00000030092	NonProperStrand	5	chr1	88247774	88247860	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-10.2025
chr2	158185537	158185645	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr18	74938053	74938146	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	ProperStrand	1022	3	-4.0803
chr8	4267337	4267649	protein_coding	Timm44	exon	ENSMUSG00000002949	ProperStrand	63	chr1	152296282	152296300	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	1	-8.8104
chr12	73724864	73724880	LTR	RMER6B	ERVK	chr12RMER6B73724725	ProperStrand	1	chr2	31058555	31058574	protein_coding	Gpr107	intron	ENSMUSG00000000194	ProperStrand	99	1	-inf
chr5	144946366	144946445	protein_coding	Lmtk2	utr3	ENSMUSG00000038970	ProperStrand	60	chr18	33954840	33954930	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-3.5055
chr4	151707341	151707429	protein_coding	Rpl22	utr3	ENSMUSG00000028936	ProperStrand	112	chr4	131865890	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	5	-5.8630
chr5	121771553	121772264	protein_coding	Gm15800	exon	ENSMUSG00000042744	ProperStrand	47	chr1	162967162	162967178	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	3	-19.8205
chr7	4099236	4099326	protein_coding	Leng8	utr3	ENSMUSG00000035545	ProperStrand	49	chr4	131865391	131865471	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-4.3863
chr4	102843740	102843769	protein_coding	Slc35d1	utr3	ENSMUSG00000028521	ProperStrand	33	chr10	23505152	23505255	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-5.8902
chr11	87240282	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	chr10	23505152	23505271	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-2.0429
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr9	22166574	22166674	protein_coding	Anln	intron	ENSMUSG00000036777	ProperStrand	133	1	-6.7327
chr5	121655016	121655128	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	chr10	62228320	62228357	snoRNA	ENSMUSG00000080469_Snord98	.	ENSMUSG00000080469	ProperStrand	124	9	-inf
chr17	81344133	81344150	protein_coding	Tmem178	exon	ENSMUSG00000024245	ProperStrand	67	chr2	29881585	29881619	protein_coding	Spna2	exon	ENSMUSG00000057738	ProperStrand	222	1	-10.4676
chr7	28443911	28443927	protein_coding	Map3k10	exon	ENSMUSG00000040390	NonProperStrand	21	chr11	106362359	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-7.9401
chr2	26768368	26768406	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	chr9	64143745	64143835	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	2	-1.7549
chr11	69481335	69481432	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	chr19	12086073	12086112	tRNA	tRNA637-ArgTCT	.	377338	ProperStrand	17	3	-13.2313
chr7	30231514	30231593	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	chr11	106362669	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-3.1199
chr1	89337167	89337360	protein_coding	Gigyf2	exon	ENSMUSG00000048000	ProperStrand	128	chr5	14252800	14252816	protein_coding	Sema3e	utr3	ENSMUSG00000063531	ProperStrand	125	1	-10.3184
chr2	103637100	103637185	protein_coding	Caprin1	utr5	ENSMUSG00000027184	ProperStrand	145	chr7	29136544	29136634	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-2.0458
chr9	22440070	22443202	protein_coding	Bbs9	exon	ENSMUSG00000035919	ProperStrand	51	chr16	23111373	23111453	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.4898
chr9	78550959	78550976	protein_coding	Cd109	exon	ENSMUSG00000046186	NonProperStrand	36	chr7	148634702	148634836	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-8.2102
chr10	5987360	5987423	protein_coding	Akap12	utr3	ENSMUSG00000038587	ProperStrand	1008	chr11	77995189	77995211	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-1.1857
chr4	14298882	14298900	LTR	RLTR12B	ERVK	chr4RLTR12B14298879	ProperStrand	1	chr3	123210951	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-inf
chr5	143874599	143874615	protein_coding	Rnf216	utr5	ENSMUSG00000045078	NonProperStrand	29	chr17	35089184	35089240	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-6.9251
chr2	84878031	84878068	protein_coding	Ssrp1	utr5	ENSMUSG00000027067	ProperStrand	118	chr10	110918593	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	3	-6.0666
chr17	51318267	51318289	protein_coding	Tbc1d5	intron	ENSMUSG00000023923	ProperStrand	16	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-9.5937
chr1	63223709	63223796	protein_coding	Eef1b2	utr5	ENSMUSG00000025967	ProperStrand	106	chr10	23505559	23505595	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-6.4214
chr3	90197173	90197671	protein_coding	Ints3	exon	ENSMUSG00000027933	ProperStrand	87	chr17	35089181	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	2	-7.8830
chr13	73952681	73952781	protein_coding	Slc12a7	utr3	ENSMUSG00000017756	ProperStrand	80	chr11	83107871	83107903	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	1	-8.2603
chr10	27241077	27241141	protein_coding	Lama2	intron	ENSMUSG00000019899	ProperStrand	6	chr9	39882020	39882036	protein_coding	Olfr982	exon	ENSMUSG00000049010	NonProperStrand	35	1	-18.4856
chr14	56368915	56369924	protein_coding	2610027L16Rik	exon	ENSMUSG00000019297	ProperStrand	43	chr10	90581059	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-5.4550
chrX	13164082	13177489	protein_coding	Cask	exon	ENSMUSG00000031012	NonProperStrand	26	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-10.6154
chr11	87795084	87795154	protein_coding	Dynll2	intron	ENSMUSG00000020483	ProperStrand	22	chr6	24684480	24684497	protein_coding	Hyal6	exon	ENSMUSG00000029679	NonProperStrand	114	1	-14.0607
chr19	5801072	5801172	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr4	102635076	102635092	protein_coding	Sgip1	exon	ENSMUSG00000028524	ProperStrand	3	1	-13.9097
chr9	56266647	56266664	protein_coding	Hmg20a	utr5	ENSMUSG00000032329	ProperStrand	87	chr7	13516163	13516203	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	1	-7.9237
chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	chr8	28383866	28383885	protein_coding	Eif4ebp1	exon	ENSMUSG00000031490	ProperStrand	22	1	-11.0948
chr4	63211298	63211314	protein_coding	Atp6v1g1	utr3	ENSMUSG00000039105	NonProperStrand	24	chr11	69483139	69483229	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-10.0971
chr13	118760413	118760429	protein_coding	Hcn1	exon	ENSMUSG00000021730	ProperStrand	8	chr9	106796525	106796629	protein_coding	Dock3	utr3	ENSMUSG00000039716	ProperStrand	24	1	-18.7360
chr14	55733879	55733979	protein_coding	Jph4	exon	ENSMUSG00000022208	ProperStrand	2	chr16	38220054	38220071	protein_coding	Gsk3b	exon	ENSMUSG00000022812	ProperStrand	80	1	-20.5289
chr3	106370484	106370564	protein_coding	Dram2	intron	ENSMUSG00000027900	ProperStrand	3	chr12	83332993	83333083	protein_coding	Sipa1l1	intron	ENSMUSG00000042700	NonProperStrand	12	1	-inf
chr17	28465926	28465964	protein_coding	Rpl10a	exon	ENSMUSG00000037805	ProperStrand	121	chr5	130295458	130295548	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	2	-6.5745
chr11	120347051	120349421	protein_coding	Mrpl12	exon	ENSMUSG00000039640	ProperStrand	49	chr11	62416600	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-5.5616
chr7	52309977	52309993	protein_coding	Prrg2	exon	ENSMUSG00000007837	NonProperStrand	281	chr13	58495497	58495721	protein_coding	Hnrnpk	exon	ENSMUSG00000021546	ProperStrand	117	1	-8.8801
chrX	148494310	148495534	protein_coding	Smc1a	exon	ENSMUSG00000041133	ProperStrand	104	chr1	88247743	88247762	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-4.0455
chr6	119900557	119987396	protein_coding	Wnk1	exon	ENSMUSG00000045962	ProperStrand	221	chr16	23110913	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	10	-1.2019
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr11	84042523	84045163	protein_coding	Acaca	exon	ENSMUSG00000020532	ProperStrand	100	1	-7.6955
chr9	114470186	114470203	protein_coding	Trim71	intron	ENSMUSG00000079259	ProperStrand	162	chr9	40612830	40612920	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	1	-7.5603
chr16	16323855	16324068	protein_coding	Dnm1l	exon	ENSMUSG00000022789	NonProperStrand	38	chr12	17552966	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-5.9844
chr2	179322378	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr7	88489430	88489446	protein_coding	Rps17	intron	ENSMUSG00000061787	ProperStrand	105	1	-10.0881
chr15	98348596	98348696	LTR	ORR1D2	MaLR	chr15ORR1D298348517	NonProperStrand	3	chr8	32260335	32260359	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	3	-inf
chr15	76735421	76736306	protein_coding	Rpl8	exon	ENSMUSG00000003970	ProperStrand	191	chr9	120038548	120038608	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.1882
chr11	62416577	62416602	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr7	148634712	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-1.2946
chr11	70792200	70793525	protein_coding	C1qbp	exon	ENSMUSG00000018446	ProperStrand	46	chr1	162965986	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-6.8876
chr8	111238940	111238956	protein_coding	Zfhx3	utr5	ENSMUSG00000038872	ProperStrand	65	chr2	32818815	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-5.3146
chr1	157414787	157419365	protein_coding	Acbd6	utr3	ENSMUSG00000033701	ProperStrand	10	chr3	153573528	153573595	snoRNA	ENSMUSG00000064731_Snord45b	.	ENSMUSG00000064731	ProperStrand	205	1	-14.5227
chr7	4745757	4746024	protein_coding	Rpl28	exon	ENSMUSG00000030432	ProperStrand	220	chr10	23506278	23506342	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	2	-7.3426
chr15	98885700	98885717	protein_coding	Prph	exon	ENSMUSG00000023484	NonProperStrand	5	chr17	35089181	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-10.6035
chr16	23111770	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	chr12	110923173	110923231	snoRNA	ENSMUSG00000084487_SNORD113	.	ENSMUSG00000084487	ProperStrand	183	3	-1.8523
chr16	23110531	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	chr7	67123692	67123759	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	3	-0.9232
chr4	120819995	120820081	protein_coding	Rlf	exon	ENSMUSG00000049878	ProperStrand	58	chr4	131865943	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.8207
chr7	148069708	148069798	protein_coding	Psmd13	intron	ENSMUSG00000025487	ProperStrand	16	chr18	33954838	33954918	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-6.0667
chr2	32818175	32818534	protein_coding	Rpl12	exon	ENSMUSG00000038900	ProperStrand	167	chr2	26768404	26768433	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-3.6480
mmu-miR-6240	2	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr17	50691373	50691391	protein_coding	Plcl2	intron	ENSMUSG00000038910	ProperStrand	10	1	-9.5334
chr7	151765212	151765228	antisense	Gm10574	.	ENSMUSG00000073778	ProperStrand	357	chr2	142445351	142445383	protein_coding	Kif16b	utr3	ENSMUSG00000038844	ProperStrand	10	1	-13.4063
chr16	30514154	30514171	protein_coding	Tmem44	utr3	ENSMUSG00000022537	ProperStrand	217	chr15	72937725	72937789	protein_coding	Eif2c2	exon	ENSMUSG00000036698	ProperStrand	154	1	-8.8467
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr17	47604564	47604664	protein_coding	AI661453	exon	ENSMUSG00000034382	ProperStrand	8	1	-9.0292
chr2	160191558	160191574	protein_coding	Mafb	exon	ENSMUSG00000074622	ProperStrand	31	chr11	97642944	97643013	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-6.2248
chr10	78243274	78243360	protein_coding	Slc1a6	utr5	ENSMUSG00000005357	ProperStrand	4	chr6	115758023	115758134	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	4	-inf
chr12	87860237	87860327	protein_coding	Esrrb	utr3	ENSMUSG00000021255	ProperStrand	254	chr1	89681244	89681324	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-2.7465
chr2	119412156	119412247	protein_coding	1500003O03Rik	utr3	ENSMUSG00000014077	ProperStrand	22	chr2	26494758	26494844	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	13	-20.1396
chr15	63607820	63607836	protein_coding	Gsdmc	utr3	ENSMUSG00000079025	NonProperStrand	3	chr9	15118249	15118321	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-9.6743
chr17	56704036	56705393	protein_coding	Safb2	exon	ENSMUSG00000042625	ProperStrand	29	chr16	23110879	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0921
chr10	71030457	71030478	LINE	Lx9	L1	chr10Lx971030177	ProperStrand	1	chr17	24857815	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-inf
chr1	162967507	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	chr3	88497873	88497982	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	5	-0.8982
chr11	68716799	68717944	protein_coding	Rpl26	exon	ENSMUSG00000060938	ProperStrand	130	chr19	8798738	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-3.3488
chr19	5422884	5422926	protein_coding	Drap1	utr3	ENSMUSG00000024914	ProperStrand	6	chr16	23110986	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.7876
chr5	74489538	74489563	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr5	118376503	118376519	protein_coding	Nos1	exon	ENSMUSG00000029361	NonProperStrand	237	2	-5.2225
chr18	32978791	32978807	protein_coding	Tslp	utr3	ENSMUSG00000024379	ProperStrand	2	chr11	68886928	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-11.5005
chr13	93274858	93274900	protein_coding	Zfyve16	intron	ENSMUSG00000021706	ProperStrand	14	chr4	131908779	131908869	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.6665
chr11	48619094	48619483	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	1	-5.3704
chr10	120709244	120712786	protein_coding	Tbc1d30	exon	ENSMUSG00000052302	ProperStrand	233	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-2.1444
chr1	66521957	66521973	protein_coding	Unc80	intron	ENSMUSG00000055567	NonProperStrand	212	chr15	79913301	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-1.4685
chr17	65452916	65452938	LTR	MTC	MaLR	chr17MTC65452903	NonProperStrand	12	chr11	69481333	69481386	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	3	-14.7772
chr2	90235318	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	124132209	124132225	lincRNA	1700057H15Rik	intron	ENSMUSG00000084757	ProperStrand	40	1	-5.2466
chr14	65391903	65395142	protein_coding	Kif13b	exon	ENSMUSG00000060012	ProperStrand	37	chr4	131908264	131908344	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.1700
chr16	33726533	33726550	protein_coding	Heg1	exon	ENSMUSG00000075254	NonProperStrand	37	chr19	8800356	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-4.4406
chr5	125503264	125503905	protein_coding	Ncor2	exon	ENSMUSG00000029478	ProperStrand	377	chr18	33954920	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-1.4247
chr2	9985901	9985917	protein_coding	Atp5c1	exon	ENSMUSG00000025781	ProperStrand	138	chr11	106362641	106362672	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-5.7598
chr9	21204999	21209314	protein_coding	Ilf3	utr3	ENSMUSG00000032178	ProperStrand	164	chr8	73419656	73419756	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-4.3090
chr3	97012590	97012656	protein_coding	Bcl9	exon	ENSMUSG00000038256	ProperStrand	94	chr16	17210492	17210512	protein_coding	Rimbp3	exon	ENSMUSG00000071636	ProperStrand	67	1	-12.1886
chr1	173391980	173393033	protein_coding	F11r	exon	ENSMUSG00000038235	ProperStrand	9	chr11	69481347	69481427	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-6.9176
chr11	97489600	97489617	protein_coding	E130012A19Rik	exon	ENSMUSG00000043439	NonProperStrand	110	chr5	121655016	121655096	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.6553
chr6	137683756	137694151	protein_coding	Strap	exon	ENSMUSG00000030224	ProperStrand	27	chr4	131865868	131865986	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	6	-17.2656
chr11	62416575	62416605	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr11	116938568	116938658	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	6	-12.8143
chr11	94805703	94805925	protein_coding	Col1a1	exon	ENSMUSG00000001506	ProperStrand	3	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-14.5462
chr5	125876686	125876776	LTR	ORR1A2	MaLR	chr5ORR1A2125876601	NonProperStrand	1	chr10	58506295	58506385	protein_coding	Sh3rf3	intron	ENSMUSG00000037990	NonProperStrand	9	1	-inf
chr17	85482653	85489599	protein_coding	Prepl	utr5	ENSMUSG00000024127	ProperStrand	106	chr17	13112530	13112583	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-3.5105
chr5	118605262	118605281	protein_coding	Fbxw8	exon	ENSMUSG00000032867	ProperStrand	61	chr16	23111734	23111820	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-3.4267
chr1	162968212	162968264	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	chr10	90581034	90581114	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	4	-1.2978
chr14	74742742	74742759	LTR	RMER13B	ERVK	chr14RMER13B74742705	NonProperStrand	12	chr18	33954819	33954874	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-6.6526
chr14	22489581	22489681	protein_coding	Myst4	exon	ENSMUSG00000021767	ProperStrand	151	chr19	8799053	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-4.0557
chr7	26014885	26014987	protein_coding	Gsk3a	exon	ENSMUSG00000057177	ProperStrand	14	chr7	82600670	82600686	protein_coding	Akap13	intron	ENSMUSG00000066406	ProperStrand	80	1	-15.7246
chr15	82980099	82980193	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	NonProperStrand	6	chr17	13115733	13115785	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	NonProperStrand	2	1	-inf
chr7	51505242	51505308	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	chr18	74938045	74938145	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	ProperStrand	1022	1	-2.7209
chr15	101861450	101861770	protein_coding	Krt18	exon	ENSMUSG00000023043	ProperStrand	6	chr3	151955868	151955887	protein_coding	Fam73a	intron	ENSMUSG00000054942	ProperStrand	34	1	-18.2219
chr2	25563070	25563086	antisense	A230005M16Rik	.	ENSMUSG00000087612	ProperStrand	103	chr12	36818619	36818657	protein_coding	Bzw2	utr3	ENSMUSG00000020547	ProperStrand	29	1	-13.7045
chr4	46554810	46554826	protein_coding	Coro2a	exon	ENSMUSG00000028337	NonProperStrand	24	chr8	73419655	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.8583
chr17	87833345	87834465	protein_coding	Calm2	utr3	ENSMUSG00000036438	ProperStrand	59	chr1	162965556	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.3068
chr1	92949256	92949273	protein_coding	Lrrfip1	intron	ENSMUSG00000026305	NonProperStrand	8	chr19	8963043	8963085	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-6.1145
chr1	93263065	93263083	protein_coding	Fam132b	exon	ENSMUSG00000047443	NonProperStrand	98	chr6	71832577	71832687	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-4.6603
chr1	71614459	71615582	protein_coding	Atic	exon	ENSMUSG00000026192	ProperStrand	30	chr4	131865856	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.9337
chr2	180234731	180234748	protein_coding	Ntsr1	utr5	ENSMUSG00000027568	NonProperStrand	17	chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-8.9928
chr8	129468745	129468835	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	chr13	96102573	96102649	snoRNA	ENSMUSG00000077380_SNORA68	.	ENSMUSG00000077380	ProperStrand	51	2	-7.8350
chr4	49600109	49610507	protein_coding	2810432L12Rik	utr5	ENSMUSG00000039611	ProperStrand	3	chr7	117189922	117189978	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-9.5269
chr16	57391759	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr9	120039532	120039682	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	6	-1.6175
chr15	36535621	36535657	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr6	83111671	83111687	protein_coding	1700003E16Rik	exon	ENSMUSG00000030030	ProperStrand	352	1	-4.4200
chr7	26056225	26056282	protein_coding	Cic	exon	ENSMUSG00000005442	ProperStrand	80	chrX	93136011	93136027	protein_coding	Las1l	exon	ENSMUSG00000057421	ProperStrand	248	1	-9.8903
chr2	84530865	84531297	protein_coding	Zdhhc5	exon	ENSMUSG00000034075	NonProperStrand	144	chr1	162968442	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-4.3827
chr4	132591861	132591961	protein_coding	Ahdc1	intron	ENSMUSG00000037692	ProperStrand	100	chr4	131908236	131908277	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.7641
chr16	57391760	57391792	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr9	79915104	79915120	protein_coding	Senp6	utr5	ENSMUSG00000034252	ProperStrand	110	1	-6.5893
chr14	121025290	121025380	LTR	ORR1A3	MaLR	chr14ORR1A3121025130	ProperStrand	1	chr14	120123491	120123571	protein_coding	Hs6st3	intron	ENSMUSG00000053465	NonProperStrand	134	1	-inf
chr6	60981826	60981847	LTR	RMER5	ERV1	chr6RMER560981643	NonProperStrand	5	chr10	23505559	23505603	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-12.7048
chr11	101645784	101645807	protein_coding-noncoding	Etv4	utr3	ENSMUSG00000017724	NonProperStrand	9	chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	1	-13.3739
chr5	121655126	121658854	protein_coding	Rpl6	intron	ENSMUSG00000029614	ProperStrand	332	chr16	23110478	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-1.2624
chr6	146721074	146721174	protein_coding	Stk38l	intron	ENSMUSG00000001630	ProperStrand	60	chr11	62418015	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-5.5572
chr6	131330350	131330424	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	ProperStrand	408	chr19	8800410	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	5	-4.5685
chr4	134926614	134927796	protein_coding	A330049M08Rik	exon	ENSMUSG00000043924	ProperStrand	130	chr2	63936035	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-6.3274
chr7	20316073	20318310	protein_coding	Pvrl2	exon	ENSMUSG00000062300	ProperStrand	110	chr2	38857124	38857224	protein_coding	Rpl35	utr3	ENSMUSG00000062997	ProperStrand	68	1	-11.8447
chr8	46886351	46888988	antisense	D330022K07Rik	.	ENSMUSG00000085440	ProperStrand	5	chr2	164311966	164311983	protein_coding	Dbndd2	utr5	ENSMUSG00000017734	ProperStrand	53	1	-18.1807
chr10	79440715	79440940	protein_coding	ORF61	exon	ENSMUSG00000013858	ProperStrand	71	chr4	131865391	131865451	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-3.6876
chr16	16422395	16422420	protein_coding	Fgd4	utr3	ENSMUSG00000022788	ProperStrand	9	chr14	33005132	33005222	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-7.7725
chr7	104121204	104121288	protein_coding	Nars2	intron	ENSMUSG00000018995	ProperStrand	6	chr16	23110984	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-10.1290
chr2	32236744	32236818	protein_coding	1110008P14Rik	intron	ENSMUSG00000039195	ProperStrand	5	chr1	89673627	89673727	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-8.2536
chr9	78326430	78327184	protein_coding	Eef1a1	utr3	ENSMUSG00000037742	ProperStrand	1990	chr7	118219574	118219655	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	21	-14.1890
chr15	101919169	101919313	protein_coding	Eif4b	exon	ENSMUSG00000058655	ProperStrand	484	chr11	69481342	69481432	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	3	-1.3576
chr11	33183982	33189586	protein_coding	Ranbp17	exon	ENSMUSG00000040594	ProperStrand	20	chr11	6428104	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-8.7299
chr14	27199812	27199828	antisense	4933413J09Rik	.	ENSMUSG00000021874	ProperStrand	51	chr7	29136537	29136599	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.6434
chr11	62194930	62194966	protein_coding	Ncor1	exon	ENSMUSG00000018501	ProperStrand	132	chr4	147999485	147999514	protein_coding	Tardbp	intron	ENSMUSG00000041459	ProperStrand	120	2	-16.2601
chr9	95525016	95525035	antisense	Gm16126	.	ENSMUSG00000086585	NonProperStrand	229	chr17	35275548	35275681	protein_coding	Bag6	exon	ENSMUSG00000024392	ProperStrand	181	1	-8.4174
chr7	17082474	17082530	protein_coding	Grlf1	utr3	ENSMUSG00000058230	ProperStrand	38	chr12	112779148	112779238	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-5.6662
chr2	37502726	37502742	protein_coding	Strbp	utr5	ENSMUSG00000026915	ProperStrand	90	chr2	29926530	29926600	protein_coding	Set	utr3	ENSMUSG00000054766	ProperStrand	167	1	-10.4445
chr5	8849643	8851537	protein_coding	Abcb1b	exon	ENSMUSG00000028970	ProperStrand	7	chr17	24856674	24856754	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-10.8269
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr19	10057299	10057399	protein_coding	Fth1	utr5	ENSMUSG00000024661	ProperStrand	75	10	-inf
chr2	154699357	154702401	protein_coding	Eif2s2	exon	ENSMUSG00000074656	ProperStrand	96	chr19	8798484	8798524	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-4.3083
chr5	107991810	107999194	protein_coding	Glmn	exon	ENSMUSG00000029276	ProperStrand	8	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-10.2840
chr4	46145372	46145462	protein_coding	Tstd2	intron	ENSMUSG00000035495	ProperStrand	10	chr11	69483146	69483226	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-5.8555
chr2	128956207	128956284	protein_coding	Chchd5	exon	ENSMUSG00000037938	ProperStrand	4	chr8	72864158	72864184	protein_coding	Upf1	intron	ENSMUSG00000058301	ProperStrand	90	1	-18.4102
chr7	26538022	26538067	protein_coding	Hnrnpul1	intron	ENSMUSG00000040725	ProperStrand	84	chr19	8798745	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-4.1589
chr11	58682398	58682415	protein_coding	2810021J22Rik	utr5	ENSMUSG00000020491	ProperStrand	162	chr5	108333572	108333666	snoRNA	ENSMUSG00000064453_Snord21	.	ENSMUSG00000064453	ProperStrand	201	1	-8.8983
chr1	97221028	97221078	protein_coding	Fam174a	intron	ENSMUSG00000051185	ProperStrand	1	chr2	130101272	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-inf
chr8	3803253	3803343	misc_RNA	RNaseP_nuc	.	ENSMUSG00000088025	ProperStrand	328	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-2.1060
chr11	80056900	80056980	protein_coding	Rhot1	exon	ENSMUSG00000017686	ProperStrand	40	chr17	35299507	35299597	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-5.5666
chr11	117074800	117074818	protein_coding	Sept9	intron	ENSMUSG00000059248	NonProperStrand	8	chr8	129468746	129468797	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-8.4652
chr14	67634727	67691207	protein_coding	Ppp2r2a	utr5	ENSMUSG00000022052	ProperStrand	45	chr16	23110890	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	8	-9.4769
chr9	62641629	62641658	protein_coding	Fem1b	utr3	ENSMUSG00000032244	ProperStrand	111	chr11	68876540	68876561	tRNA	tRNA1821-SerGCT	.	318252	ProperStrand	39	2	-18.4617
chr5	8403141	8403168	protein_coding	Dbf4	exon	ENSMUSG00000002297	ProperStrand	38	chr9	15119664	15119764	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-5.8952
chr1	137531595	137531695	protein_coding	Nav1	intron	ENSMUSG00000090399	NonProperStrand	8	chr1	162965574	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-7.2483
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-1.9037
chr7	28320862	28320924	protein_coding	Pld3	exon	ENSMUSG00000003363	ProperStrand	8	chr1	72898939	72898970	protein_coding	Igfbp2	utr3	ENSMUSG00000039323	ProperStrand	406	2	-19.1219
chr11	98011675	98011734	protein_coding	Fbxl20	utr5	ENSMUSG00000020883	ProperStrand	23	chr8	32260336	32260425	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-6.5150
chr3	69121012	69121028	protein_coding	Ppm1l	utr5	ENSMUSG00000027784	ProperStrand	32	chr4	116826699	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-8.0385
chr19	7100832	7103171	protein_coding	Stip1	exon	ENSMUSG00000024966	ProperStrand	100	chr9	15119736	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.7877
chr6	35174517	35191063	protein_coding	Nup205	exon	ENSMUSG00000038759	ProperStrand	56	chr1	162965536	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-8.5181
chr11	100359936	100380467	protein_coding	Acly	exon	ENSMUSG00000020917	ProperStrand	183	chr4	131908804	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-0.8690
chr11	70795697	70795743	protein_coding	C1qbp	exon	ENSMUSG00000018446	ProperStrand	46	chr3	146637410	146637426	protein_coding	Ttll7	intron	ENSMUSG00000036745	NonProperStrand	16	1	-16.5387
chr11	88560831	88560911	protein_coding	Msi2	intron	ENSMUSG00000069769	ProperStrand	159	chr3	153573528	153573573	snoRNA	ENSMUSG00000064731_Snord45b	.	ENSMUSG00000064731	ProperStrand	205	1	-8.8963
chr6	85397979	85398033	protein_coding	1700040I03Rik	exon	ENSMUSG00000030008	ProperStrand	2	chr9	15118323	15118380	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-inf
chr9	96264601	96264676	protein_coding	Atp1b3	utr5	ENSMUSG00000032412	ProperStrand	20	chr10	110918661	110918693	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-5.5586
chr11	115870444	115870488	protein_coding	Galk1	exon	ENSMUSG00000020766	ProperStrand	24	chr18	57400307	57400324	protein_coding	Megf10	exon	ENSMUSG00000024593	ProperStrand	143	1	-13.4251
chr2	167340647	167340729	protein_coding	Rnf114	utr3	ENSMUSG00000006418	ProperStrand	18	chr7	116664794	116664872	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-4.7864
chr5	14224393	14225555	protein_coding	Sema3e	exon	ENSMUSG00000063531	ProperStrand	125	chr9	120038466	120038519	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.8032
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr2	93542736	93542754	protein_coding	Ext2	intron	ENSMUSG00000027198	NonProperStrand	21	1	-8.0023
chr12	87287215	87287233	protein_coding	Ttll5	intron	ENSMUSG00000012609	NonProperStrand	6	chr11	102294590	102294607	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	1	-13.6547
chr2	90235309	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	3502218	3502234	protein_coding	Tgs1	exon	ENSMUSG00000028233	ProperStrand	10	1	-8.0457
chr4	144728562	144728605	protein_coding	Vps13d	exon	ENSMUSG00000020220	ProperStrand	59	chr13	9170072	9170136	protein_coding	Larp4b	exon	ENSMUSG00000033499	ProperStrand	53	3	-19.2126
chr18	8379920	8379937	LTR	RLTR9C	ERVK	chr18RLTR9C8379606	NonProperStrand	5	chr17	24858602	24858622	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	1	-14.8133
chr2	152138053	152138085	protein_coding	Tbc1d20	utr3	ENSMUSG00000027465	ProperStrand	27	chr4	116230385	116230401	protein_coding	Gpbp1l1	utr5	ENSMUSG00000034042	NonProperStrand	106	1	-13.7863
chr11	23261377	23261605	protein_coding	Usp34	exon	ENSMUSG00000056342	ProperStrand	68	chr16	23111373	23111463	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-4.9685
chr10	34002159	34002249	protein_coding	Tspyl1	exon	ENSMUSG00000047514	ProperStrand	22	chr3	123210917	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.8504
chr11	78085516	78085548	protein_coding	2610507B11Rik	exon	ENSMUSG00000010277	ProperStrand	246	chr8	73419713	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-0.9311
chr1	91785487	91785605	protein_coding	Agap1	utr3	ENSMUSG00000055013	ProperStrand	229	chr3	153573527	153573568	snoRNA	ENSMUSG00000064731_Snord45b	.	ENSMUSG00000064731	ProperStrand	205	1	-8.1696
chrX	99811324	99811378	protein_coding	Phka1	exon	ENSMUSG00000034055	ProperStrand	7	chr16	23111774	23111837	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-9.9082
chr15	99609902	99609941	protein_coding	Lima1	utr3	ENSMUSG00000023022	ProperStrand	159	chr11	68886946	68887036	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-2.3884
chr11	97538549	97538566	protein_coding	Mllt6	intron	ENSMUSG00000038437	ProperStrand	110	chr19	37388020	37388047	protein_coding	Ide	exon	ENSMUSG00000056999	ProperStrand	19	1	-14.4334
chr6	31378200	31381214	protein_coding	Mkln1	exon	ENSMUSG00000025609	ProperStrand	18	chr9	15118335	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-5.7882
chr5	141194783	141194867	protein_coding	Baat1	utr3	ENSMUSG00000000148	ProperStrand	14	chr12	80276976	80276993	protein_coding	Rdh11	utr3	ENSMUSG00000066441	NonProperStrand	23	1	-18.1755
chr14	76247725	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	chr7	106631305	106631338	snoRNA	ENSMUSG00000065822_Snord15a	.	ENSMUSG00000065822	ProperStrand	128	1	-2.7864
chr8	127363471	127363544	protein_coding	2810004N23Rik	utr3	ENSMUSG00000031984	ProperStrand	22	chr9	120037984	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-6.6827
chr11	87350241	87350341	protein_coding	Tex14	exon	ENSMUSG00000010342	ProperStrand	41	chr16	23110521	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-7.9793
chr12	86355646	86355679	protein_coding	Ylpm1	exon	ENSMUSG00000021244	ProperStrand	100	chr11	51551280	51551396	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	4	-19.6922
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	3	-8.4722
chr2	16278620	16278639	protein_coding	Plxdc2	utr5	ENSMUSG00000026748	NonProperStrand	44	chr1	193730797	193730813	protein_coding	Slc30a1	utr5	ENSMUSG00000037434	ProperStrand	42	2	-21.0447
chr10	77450971	77451039	protein_coding	Pfkl	exon	ENSMUSG00000020277	ProperStrand	179	chr16	23110549	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-0.8541
chr8	37642718	37645812	protein_coding	Dlc1	exon	ENSMUSG00000031523	ProperStrand	89	chr4	131866619	131866677	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	1	-8.3158
chr3	104685773	104692233	protein_coding	St7l	exon	ENSMUSG00000045576	ProperStrand	19	chr8	98270000	98270090	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	5	-inf
chr9	58373073	58373125	protein_coding	Cd276	utr3	ENSMUSG00000035914	ProperStrand	19	chr15	101914615	101914715	protein_coding	Eif4b	exon	ENSMUSG00000058655	ProperStrand	484	1	-11.4638
chr10	40657609	40657651	protein_coding	Wasf1	utr3	ENSMUSG00000019831	ProperStrand	12	chr17	35299522	35299622	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	3	-17.9607
chr13	101541067	101541088	protein_coding	Cenph	intron	ENSMUSG00000045273	NonProperStrand	45	chr4	131908236	131908357	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-5.2244
chr9	108353526	108353626	protein_coding	Klhdc8b	utr5	ENSMUSG00000032609	ProperStrand	2	chr4	131865936	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-8.7800
chr9	78023109	78023173	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr4	137098697	137115270	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	5	-7.2070
chr2	24819444	24819486	protein_coding	Wdr85	intron	ENSMUSG00000026975	ProperStrand	323	chr7	119934449	119934472	protein_coding	Tead1	intron	ENSMUSG00000055320	ProperStrand	217	1	-7.3743
chr4	132382950	132382969	protein_coding	Ppp1r8	utr3	ENSMUSG00000028882	ProperStrand	13	chr10	23505152	23505235	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-9.6524
chr11	50415772	50415789	lincRNA	Gm12198	intron	ENSMUSG00000085564	ProperStrand	1	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-inf
chr4	122700268	122700311	protein_coding	Trit1	intron	ENSMUSG00000028653	ProperStrand	9	chr16	23110916	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.9939
chr17	35141258	35141432	protein_coding	Vars	exon	ENSMUSG00000007029	ProperStrand	121	chr5	108336390	108336490	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-3.5559
chr19	7036521	7036548	protein_coding	Plcb3	exon	ENSMUSG00000024960	ProperStrand	111	chr4	131865913	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.8331
chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	chr11	6428088	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-1.0363
chr5	54389949	54389966	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	chr2	83693562	83693578	protein_coding	Fam171b	exon	ENSMUSG00000048388	NonProperStrand	175	1	-8.6382
chr19	41667993	41668045	protein_coding	AI606181	exon	ENSMUSG00000074873	ProperStrand	3	chr9	15118333	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-16.2372
chr12	106038727	106042827	protein_coding	Clmn	exon	ENSMUSG00000021097	ProperStrand	50	chr9	58108138	58108613	protein_coding	Stoml1	exon	ENSMUSG00000032333	ProperStrand	9	1	-17.5746
chrX	139155042	139155059	protein_coding	Tmem164	intron	ENSMUSG00000047045	NonProperStrand	29	chr18	35716694	35716742	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.4490
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr9	15119280	15119335	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	1	-3.5564
chr17	37094817	37095126	protein_coding	Znrd1	exon	ENSMUSG00000036315	ProperStrand	10	chr3	123210854	123210876	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	5	-21.5077
chr9	35017603	35017625	protein_coding	Foxred1	exon	ENSMUSG00000039048	ProperStrand	64	chr7	152118581	152118597	protein_coding	Ccnd1	exon	ENSMUSG00000070348	ProperStrand	93	1	-12.3021
chr17	47885563	47885664	protein_coding	Tfeb	intron	ENSMUSG00000023990	ProperStrand	78	chr7	52382755	52382800	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-6.2331
chr19	6261807	6261824	protein_coding	Atg2a	exon	ENSMUSG00000024773	ProperStrand	97	chr2	160191558	160191574	protein_coding	Mafb	exon	ENSMUSG00000074622	ProperStrand	31	1	-13.6814
chr2	24205199	24205215	protein_coding	Il1rn	utr3	ENSMUSG00000026981	ProperStrand	45	chr9	120038496	120038552	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.5633
chr2	26252035	26252135	protein_coding	Pmpca	utr3	ENSMUSG00000026926	ProperStrand	45	chr19	8800085	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-8.1837
chr12	60173430	60173530	protein_coding	Pnn	exon	ENSMUSG00000020994	ProperStrand	42	chr16	23111777	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-4.4113
chr4	69998582	70010182	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	chr11	98878344	98878371	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-1.5668
chr2	75515060	75515146	protein_coding	Nfe2l2	exon	ENSMUSG00000015839	ProperStrand	24	chr16	23110899	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.6072
chr9	21808214	21808981	protein_coding	Prkcsh	exon	ENSMUSG00000003402	ProperStrand	58	chr2	172181759	172181854	protein_coding	Aurka	utr3	ENSMUSG00000027496	ProperStrand	31	9	-19.2756
chr8	109410134	109410224	protein_coding	Chtf8	utr5	ENSMUSG00000046691	ProperStrand	33	chr5	130295414	130295491	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-6.4262
chr3	113827103	113827119	protein_coding	Col11a1	utr3	ENSMUSG00000027966	NonProperStrand	139	chr11	53213895	53213921	protein_coding	Aff4	exon	ENSMUSG00000049470	ProperStrand	94	1	-10.7244
chr9	31218970	31221654	protein_coding	Nfrkb	exon	ENSMUSG00000042185	ProperStrand	34	chr8	73419655	73419683	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.1854
chr12	85005207	85009080	protein_coding	Rbm25	exon	ENSMUSG00000010608	ProperStrand	42	chr15	79913288	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.2623
chr9	57997054	57997892	protein_coding	Stra6	exon	ENSMUSG00000032327	NonProperStrand	1	chr18	73693113	73693139	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-inf
chr19	12004385	12004401	protein_coding	Patl1	exon	ENSMUSG00000046139	ProperStrand	49	chr4	131908241	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-4.9215
chr1	120574034	120574124	protein_coding	Tfcp2l1	utr3	ENSMUSG00000026380	ProperStrand	158	chr4	116827800	116827880	snoRNA	ENSMUSG00000064751_SNORD46	.	ENSMUSG00000064751	ProperStrand	132	1	-9.7881
chrX	71021577	71021593	protein_coding	Srpk3	exon	ENSMUSG00000002007	NonProperStrand	4	chr5	31236537	31236647	protein_coding	Cgref1	exon	ENSMUSG00000029161	ProperStrand	7	4	-inf
chr7	31233471	31234869	protein_coding	Kirrel2	exon	ENSMUSG00000036915	ProperStrand	17	chr5	121655016	121655064	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-10.1326
chr7	30026273	30029667	protein_coding	Yif1b	exon	ENSMUSG00000030588	ProperStrand	154	chr19	8963027	8963129	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-1.8065
chr15	102044837	102044905	protein_coding	Zfp740	utr3	ENSMUSG00000046897	ProperStrand	34	chr16	23110883	23110957	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.8174
chr9	30877642	30877661	protein_coding	Zbtb44	utr3	ENSMUSG00000047412	ProperStrand	68	chr2	32818841	32818941	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-5.2268
chr17	36051675	36053262	protein_coding	Mrps18b	exon	ENSMUSG00000024436	ProperStrand	21	chr4	131908689	131908722	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.9128
chr9	53031823	53033634	protein_coding	Ddx10	exon	ENSMUSG00000053289	ProperStrand	40	chr19	8963086	8963124	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	6	-16.4873
chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	chr19	8800364	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	5	-10.2666
chr1	63225578	63225704	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	chr11	98878374	98878457	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	3	-2.2826
chr12	111931283	111931353	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr17	45704973	45705063	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	1	-2.0337
chr2	172377083	172377163	protein_coding	Tfap2c	exon	ENSMUSG00000028640	ProperStrand	13	chr8	73419683	73419773	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-9.9826
chr11	51464192	51464208	protein_coding	N4bp3	utr5	ENSMUSG00000001053	NonProperStrand	41	chr1	93182012	93182028	protein_coding	Ube2f	utr3	ENSMUSG00000034343	NonProperStrand	22	1	-16.1277
chr11	60255691	60255762	protein_coding	4933439F18Rik	utr3	ENSMUSG00000018415	ProperStrand	26	chr19	8798743	8798774	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-6.4454
chr1	155077970	155148778	protein_coding	Lamc1	intron	ENSMUSG00000026478	ProperStrand	239	chr16	43886793	43886848	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	2	-8.7578
chr6	3794656	3794677	SINE	B4A	B4	chr6B4A3794525	NonProperStrand	26	chr13	29417939	29417955	protein_coding	Cdkal1	exon	ENSMUSG00000006191	NonProperStrand	41	1	-15.8070
chr17	79051182	79051200	protein_coding	Strn	utr3	ENSMUSG00000024077	NonProperStrand	6	chr16	23111389	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-9.1716
chr5	130076956	130076972	protein_coding	Sfswap	utr3	ENSMUSG00000029439	ProperStrand	34	chr4	131908236	131908296	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.3115
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr1	72871368	72871486	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	1	-2.7575
chr2	22445646	22445731	pseudogene	Gm13339	.	ENSMUSG00000082884	ProperStrand	24	chr9	120038547	120038637	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.7604
chr1	173341933	173341949	protein_coding	Usf1	utr5	ENSMUSG00000026641	NonProperStrand	144	chr18	74938044	74938124	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	ProperStrand	1022	1	-5.9168
chrX	133268192	133268246	protein_coding	Morf4l2	exon	ENSMUSG00000031422	ProperStrand	113	chr10	122702078	122702094	protein_coding	Fam19a2	utr5	ENSMUSG00000044071	NonProperStrand	52	1	-12.3314
chr11	70464428	70464478	protein_coding	Rnf167	exon	ENSMUSG00000040746	ProperStrand	10	chr17	24343586	24343602	protein_coding	Ntn3	exon	ENSMUSG00000079662	ProperStrand	237	1	-14.2253
chr6	37907607	37907676	protein_coding	Trim24	exon	ENSMUSG00000029833	ProperStrand	27	chr19	8798744	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	2	-10.3496
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr17	35275325	35275376	protein_coding	Bag6	exon	ENSMUSG00000024392	ProperStrand	181	1	-4.2296
chr5	148113281	148113297	protein_coding	Cdx2	utr3	ENSMUSG00000029646	ProperStrand	276	chr9	64022855	64022910	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-5.0220
chr2	11705967	11705984	protein_coding	Ankrd16	exon	ENSMUSG00000047909	NonProperStrand	2	chr9	101002984	101003027	protein_coding	Msl2	exon	ENSMUSG00000066415	ProperStrand	9	1	-inf
chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	chr4	131908235	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	11	-3.8807
chr15	10504979	10504995	protein_coding	Rai14	exon	ENSMUSG00000022246	ProperStrand	180	chr3	95980330	95980373	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-4.7111
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr16	18283302	18283319	protein_coding	Dgcr8	exon	ENSMUSG00000022718	ProperStrand	67	2	-9.2844
chr4	116287009	116291558	protein_coding	Nasp	exon	ENSMUSG00000028693	ProperStrand	64	chr16	23111695	23111775	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.8017
chr3	130431026	130431076	protein_coding	Rpl34	intron	ENSMUSG00000062006	ProperStrand	51	chr17	35299551	35299641	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-5.0917
chr7	31370738	31370873	protein_coding	Wbp7	exon	ENSMUSG00000006307	NonProperStrand	2	chr3	144508868	144508886	protein_coding	Clca4	intron	ENSMUSG00000037033	ProperStrand	1	1	-inf
chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	chr11	106362640	106362676	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-3.5041
chr5	121975281	121975297	protein_coding	Mapkapk5	intron	ENSMUSG00000029454	ProperStrand	22	chr18	73693118	73693137	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-7.5214
chr4	116827806	116827841	snoRNA	ENSMUSG00000064751_SNORD46	.	ENSMUSG00000064751	ProperStrand	132	chr11	97642952	97643024	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-3.7937
chr9	49367581	49367597	protein_coding	Ncam1	intron	ENSMUSG00000039542	ProperStrand	18	chr4	131865856	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.8813
chr10	77691682	77691782	protein_coding	Trappc10	intron	ENSMUSG00000000374	ProperStrand	11	chr7	116664809	116664870	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-5.7738
chr11	50013911	50013966	protein_coding	Sqstm1	utr3	ENSMUSG00000015837	ProperStrand	36	chr4	116827121	116827150	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-8.0619
chr13	55800687	55800723	protein_coding	B230219D22Rik	exon	ENSMUSG00000045767	ProperStrand	19	chr9	15118332	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-9.3336
chr3	144748059	144749264	protein_coding	Clca5	exon	ENSMUSG00000036960	ProperStrand	86	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-8.6481
chr4	131908356	131908411	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	chr9	15130952	15130988	snoRNA	ENSMUSG00000077394_snoU2_19	.	ENSMUSG00000077394	ProperStrand	96	3	-2.7385
chr4	101136711	101136801	protein_coding	Ak4	utr3	ENSMUSG00000028527	ProperStrand	20	chr18	35716764	35716844	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.1514
chr4	129662259	129662276	protein_coding	Bai2	utr5	ENSMUSG00000028782	ProperStrand	119	chr7	29136525	29136637	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-2.4857
chr8	124642412	126867926	protein_coding	Gm20388	utr3	ENSMUSG00000092329	ProperStrand	295	chr9	120039533	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	3	-2.7946
chr14	45949538	45949554	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	chr11	106362304	106362340	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-2.6715
chr6	34342421	34342480	protein_coding	Akr1b10	exon	ENSMUSG00000061758	ProperStrand	2	chr19	8798741	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-12.1939
chr18	35102297	35102349	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-0.7677
chrX	153899158	153899259	protein_coding	Sms	exon	ENSMUSG00000071708	ProperStrand	9	chr2	26493366	26493405	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-7.5048
chr11	58969317	58969366	protein_coding	A230051G13Rik	utr3	ENSMUSG00000049287	ProperStrand	1	chr6	115757992	115758099	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-inf
chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	chr5	31190515	31190546	tRNA	tRNA109-TyrGTA	.	152394	ProperStrand	64	1	-6.4634
chr4	63240338	63240355	protein_coding	6330416G13Rik	intron	ENSMUSG00000045917	NonProperStrand	23	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-10.8651
chr1	64580282	64580371	protein_coding	Creb1	intron	ENSMUSG00000025958	ProperStrand	5	chr11	97643001	97643080	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-7.3581
chr19	57115471	57115487	protein_coding-noncoding	Ablim1	utr3	ENSMUSG00000025085	ProperStrand	20	chr16	23110940	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.6223
chr13	95590374	95590414	protein_coding	Tbca	intron	ENSMUSG00000042043	ProperStrand	3	chr8	129468751	129468867	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-10.6897
chr11	78327439	78327461	protein_coding	Poldip2	exon	ENSMUSG00000001100	NonProperStrand	1	chr16	23111774	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	NonProperStrand	47	1	-inf
chr8	73033208	73033252	protein_coding	2810422J05Rik	exon	ENSMUSG00000055553	ProperStrand	171	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-4.9313
chr18	10134552	10134571	protein_coding	Rock1	intron	ENSMUSG00000024290	ProperStrand	21	chr1	89673615	89673705	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	7	-20.6381
chr3	35754435	35754525	protein_coding	Atp11b	utr3	ENSMUSG00000037400	ProperStrand	39	chr5	74489595	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	3	-11.0076
chr8	25920545	25921169	protein_coding	Adam5	exon	ENSMUSG00000031554	ProperStrand	49	chr6	125136376	125136422	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	1	-6.8435
chr4	131865339	131865429	lincRNA	Snhg12	intron	ENSMUSG00000086290	ProperStrand	178	chr1	162965978	162966035	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-1.7381
chr11	100629809	100629875	protein_coding	Ghdc	exon	ENSMUSG00000017747	ProperStrand	1	chr8	114471294	114471384	protein_coding	Gabarapl2	intron	ENSMUSG00000031950	ProperStrand	4	1	-inf
chr5	124566336	124566353	protein_coding	Arl6ip4	utr5	ENSMUSG00000029404	ProperStrand	29	chr14	76247753	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-5.5803
chr2	26766799	26766854	snoRNA	ENSMUSG00000065258_SNORD24	.	ENSMUSG00000065258	ProperStrand	130	chr3	108357255	108357355	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-3.1026
chr5	143105574	143105643	protein_coding	Wipi2	utr5	ENSMUSG00000029578	ProperStrand	49	chr4	122970480	122970526	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-7.8193
chr18	48207179	48207255	protein_coding	Gm5506	exon	ENSMUSG00000059040	ProperStrand	105	chr7	116664820	116664910	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.6413
chr7	112782969	112782985	protein_coding	Arfip2	utr3	ENSMUSG00000030881	ProperStrand	191	chr2	154698567	154698631	protein_coding	Eif2s2	exon	ENSMUSG00000074656	ProperStrand	96	1	-10.0465
chr7	95266597	95266613	protein_coding	Grm5	intron	ENSMUSG00000049583	NonProperStrand	145	chr7	52382237	52382275	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-6.5303
chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	chr4	116826699	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-2.2775
chr5	74489253	74489325	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr4	46508034	46508134	snoRNA	ENSMUSG00000064410_SNORA36	.	ENSMUSG00000064410	ProperStrand	133	4	-13.1814
chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr1	72871149	72871241	protein_coding	Igfbp2	utr5	ENSMUSG00000039323	ProperStrand	406	1	-2.8332
chr15	99223434	99232042	protein_coding	Tmbim6	utr5	ENSMUSG00000023010	ProperStrand	64	chr2	181590068	181590104	protein_coding	Pcmtd2	utr3	ENSMUSG00000027589	ProperStrand	11	4	-19.3018
chr12	12947101	12947191	protein_coding	Mycn	exon	ENSMUSG00000037169	ProperStrand	24	chr18	33954851	33954931	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-5.2576
chr4	43505656	43505786	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	NonProperStrand	174	chr16	11144176	11144403	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	2	-13.2529
chr7	19850052	19850132	protein_coding	Vasp	exon	ENSMUSG00000030403	ProperStrand	28	chr5	74489584	74489674	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-5.2403
chr11	71564441	71564460	protein_coding	Wscd1	intron	ENSMUSG00000020811	NonProperStrand	4	chr11	69483205	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-18.8087
chrX	35833676	35833693	lincRNA	Gm7598	exon	ENSMUSG00000087390	ProperStrand	12	chr18	75161533	75161584	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-10.4710
chr1	71692242	71692262	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr6	124689223	124689268	protein_coding	Grcc10	utr3	ENSMUSG00000072772	ProperStrand	88	2	-11.3659
chr16	23610041	23610057	protein_coding	Rtp4	utr5	ENSMUSG00000033355	NonProperStrand	3	chr19	8799831	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	3	-inf
chr6	91685131	91705090	protein_coding	Slc6a6	utr3	ENSMUSG00000030096	ProperStrand	206	chr3	123210854	123210933	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	4	-2.7685
chr7	74904050	74904150	protein_coding	Synm	exon	ENSMUSG00000030554	ProperStrand	15	chr1	162966000	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	3	-14.6587
chr5	33775643	33775661	protein_coding	Nkx1-1	intron	ENSMUSG00000029112	NonProperStrand	1	chr16	23110962	23110999	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr11	20012671	20012689	protein_coding	Actr2	intron	ENSMUSG00000020152	NonProperStrand	17	chr18	47312902	47312920	protein_coding	Commd10	intron	ENSMUSG00000042705	ProperStrand	6	1	-20.8723
chr2	92453490	92453507	protein_coding	Chst1	exon	ENSMUSG00000027221	NonProperStrand	7	chr11	116938557	116938647	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	5	-inf
chr3	90845490	90845570	Other	RMER1A	Other	chr3RMER1A90845370	ProperStrand	1	chr3	90845289	90845379	Other	RMER1B	Other	chr3RMER1B90845278	ProperStrand	1	1	-inf
chr5	115901476	115901503	protein_coding	Msi1	exon	ENSMUSG00000054256	ProperStrand	12	chr11	55296195	55296258	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-9.4338
chr12	16946860	16946898	snoRNA	ENSMUSG00000064620_SNORA32	.	ENSMUSG00000064620	ProperStrand	165	chr14	76372292	76372361	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	4	-22.0796
chr17	15630080	15630125	protein_coding	Psmb1	exon	ENSMUSG00000014769	ProperStrand	19	chr10	23506293	23506348	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-9.2641
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr3	36847139	36847184	protein_coding	4932438A13Rik	exon	ENSMUSG00000037270	ProperStrand	96	1	-7.0387
chr3	37045426	37045449	LTR	RMER17A	ERVK	chr3RMER17A37045308	ProperStrand	2	chr11	62418045	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-12.9780
chr11	82692475	82692491	protein_coding	Rad51l3	exon	ENSMUSG00000018841	ProperStrand	112	chr9	108849010	108849394	protein_coding	Uqcrc1	exon	ENSMUSG00000025651	ProperStrand	43	1	-12.7328
chr19	12066414	12066462	protein_coding	Osbp	exon	ENSMUSG00000024687	ProperStrand	19	chr16	23110838	23110897	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7016
chr3	94269951	94269972	protein_coding	Riiad1	intron	ENSMUSG00000028139	ProperStrand	3	chr11	69483136	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-inf
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr9	78326950	78327154	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	3	-5.9856
chr9	15119287	15119368	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	chr10	39978423	39978484	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	6	-0.9423
chr10	90581049	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	chr1	9932550	9932626	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	2	-0.9739
chr12	25201745	25201845	protein_coding	Taf1b	exon	ENSMUSG00000059669	ProperStrand	7	chr2	63936037	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-12.2786
chr16	57391760	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr8	113578500	113579005	protein_coding	Aars	exon	ENSMUSG00000031960	ProperStrand	355	8	-inf
chr11	101466255	101466351	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	chr16	23110453	23110480	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	4	-0.7713
chr17	71990911	71991001	protein_coding	Wdr43	intron	ENSMUSG00000041057	ProperStrand	70	chr1	89681149	89681229	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-5.1409
chr2	90235298	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	21196752	21196790	protein_coding	Ilf3	exon	ENSMUSG00000032178	ProperStrand	164	1	-2.6227
chr11	52190746	52190809	protein_coding	Vdac1	intron	ENSMUSG00000020402	ProperStrand	107	chr17	24857717	24857748	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-2.6386
chr2	32818887	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	chr19	44188478	44188569	snoRNA	ENSMUSG00000077391_SNORA12	.	ENSMUSG00000077391	ProperStrand	506	13	-19.6496
chr14	104878110	104878147	protein_coding	Rnf219	exon	ENSMUSG00000022120	ProperStrand	7	chr4	131865868	131865958	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	5	-21.6852
chr10	114845988	114846178	protein_coding	Zfc3h1	utr5	ENSMUSG00000034163	ProperStrand	58	chr19	8963027	8963085	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.3317
chr10	70845566	70845656	protein_coding	Ipmk	utr3	ENSMUSG00000060733	ProperStrand	22	chr16	23111377	23111457	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.8747
chr7	57037686	57037754	protein_coding	Prmt3	utr3	ENSMUSG00000030505	ProperStrand	89	chr17	24857717	24857807	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.6661
chr14	75730885	75730912	protein_coding	Zc3h13	exon	ENSMUSG00000022000	ProperStrand	42	chr18	35716812	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.7788
chrX	71472606	71472861	protein_coding	Flna	exon	ENSMUSG00000031328	ProperStrand	134	chr16	23109049	23109090	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-5.6964
mmu-miR-6240	3	26	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr13	92796038	92796055	protein_coding	Rasgrf2	intron	ENSMUSG00000021708	NonProperStrand	6	1	-10.6285
chr4	116826700	116826764	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	chr5	121655011	121655097	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	7	-1.2408
chr15	63990448	63990535	protein_coding	Asap1	exon	ENSMUSG00000022377	ProperStrand	29	chr6	97953955	97953971	protein_coding	Mitf	exon	ENSMUSG00000035158	NonProperStrand	3	1	-inf
chr4	106851907	106851923	protein_coding	Tmem59	intron	ENSMUSG00000028618	ProperStrand	29	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-10.3934
chr8	74213907	74213987	protein_coding	Jak3	intron	ENSMUSG00000031805	ProperStrand	24	chr8	74214114	74214204	protein_coding	Insl3	exon	ENSMUSG00000079019	ProperStrand	1	1	-inf
chr5	74489202	74489262	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr11	70049038	70049054	protein_coding	0610010K14Rik	utr3	ENSMUSG00000020831	ProperStrand	16	1	-8.2701
chr2	31888792	31888892	protein_coding	Nup214	exon	ENSMUSG00000001855	ProperStrand	62	chr1	162965986	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-3.5427
chr4	116846209	116846247	protein_coding	Kif2c	exon	ENSMUSG00000028678	ProperStrand	32	chr1	102076757	102076792	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	1	-10.7035
chr7	141399351	141399367	protein_coding	Adam12	intron	ENSMUSG00000054555	NonProperStrand	49	chr15	34370661	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-3.9265
chr17	56157478	56158035	protein_coding	Sh3gl1	exon	ENSMUSG00000003200	NonProperStrand	2	chr18	35716761	35716850	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	NonProperStrand	45	1	-19.7664
chr3	100876906	100876996	protein_coding	Ptgfrn	exon	ENSMUSG00000027864	ProperStrand	67	chr16	23111728	23111808	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.7307
chr11	6428076	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	NonProperStrand	91	chr5	121655060	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	NonProperStrand	38	2	-20.0541
chr2	71085921	71085937	protein_coding	Dync1i2	exon	ENSMUSG00000027012	NonProperStrand	58	chr7	29136540	29136561	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.4223
chrX	45475094	45475112	protein_coding	Xpnpep2	exon	ENSMUSG00000037005	ProperStrand	32	chr9	15118323	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-7.7452
chr18	10052131	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr3	23326181	23326197	LTR	RLTR9D	ERVK	chr3RLTR9D23325954	ProperStrand	21	1	-10.9248
chr8	125626559	125626639	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	chr2	26494708	26494798	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-0.9922
chr1	10056712	10056795	protein_coding	Cspp1	exon	ENSMUSG00000056763	ProperStrand	37	chr17	24856708	24856753	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-7.3897
chr15	77597977	77597993	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr8	73032352	73032387	protein_coding	2810422J05Rik	exon	ENSMUSG00000055553	ProperStrand	171	1	-6.7239
chr17	12919183	12919588	protein_coding	Igf2r	exon	ENSMUSG00000023830	ProperStrand	151	chr4	131866153	131866233	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-2.0499
chr11	83822304	83822392	protein_coding	Synrg	exon	ENSMUSG00000034940	ProperStrand	49	chr18	75161140	75161173	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	3	-19.3896
chr11	84113623	84120634	protein_coding	Acaca	exon	ENSMUSG00000020532	ProperStrand	100	chr19	8800441	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-2.6163
chr4	133574127	133574143	protein_coding	Lin28a	exon	ENSMUSG00000050966	ProperStrand	55	chr2	26494806	26494842	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.2644
chr13	76008767	76008783	protein_coding	Rhobtb3	utr3	ENSMUSG00000021589	NonProperStrand	2	chr4	132394402	132394464	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	1	-16.7255
chr18	36700941	36715663	protein_coding	Slc4a9	utr3	ENSMUSG00000024485	ProperStrand	13	chr5	130300472	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-5.3899
chr16	32615457	32616901	protein_coding	Tfrc	exon	ENSMUSG00000022797	ProperStrand	71	chr2	26494745	26494825	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	6	-15.5949
chr12	112661567	112661586	protein_coding	1200009I06Rik	intron	ENSMUSG00000021280	NonProperStrand	15	chr18	73693085	73693108	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-8.3026
chr2	129110970	129111051	protein_coding	Ckap2l	exon	ENSMUSG00000048327	ProperStrand	16	chr16	23111690	23111720	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.2713
chr4	85016349	85016365	protein_coding	Sh3gl2	intron	ENSMUSG00000028488	NonProperStrand	313	chr11	62416617	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-2.1538
chr6	96426014	96426031	protein_coding	Fam19a1	intron	ENSMUSG00000059187	NonProperStrand	60	chr7	116663651	116663769	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.5117
chr5	135904373	135904481	protein_coding	Hip1	utr3	ENSMUSG00000039959	ProperStrand	30	chr9	40612871	40612920	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	7	-19.8737
chr11	41725906	41725922	lincRNA	A230004M16Rik	intron	ENSMUSG00000087306	ProperStrand	4	chr16	23110454	23110527	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-13.0671
chr11	69037669	69037685	protein_coding	Gucy2e	exon	ENSMUSG00000020890	NonProperStrand	99	chr4	121870880	122132507	pseudogene	Gm12896	.	ENSMUSG00000083558	NonProperStrand	19	1	-14.6448
chr15	74789090	74789182	protein_coding	Ly6e	utr3	ENSMUSG00000022587	ProperStrand	21	chr11	69483136	69483187	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	4	-14.2346
chr12	37040848	37040865	protein_coding	Sostdc1	utr5	ENSMUSG00000036169	NonProperStrand	13	chr1	162965989	162966041	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-6.5934
chr4	43505656	43505698	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr15	76178367	76178548	protein_coding	Sharpin	exon	ENSMUSG00000022552	ProperStrand	5	4	-21.6310
chr11	8485040	8485058	protein_coding	Tns3	intron	ENSMUSG00000020422	NonProperStrand	24	chr5	121655033	121655100	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.5126
chr9	63488588	63488646	protein_coding	Aagab	utr3	ENSMUSG00000037257	ProperStrand	8	chr8	129468746	129468836	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	2	-13.6615
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr9	120039627	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	4	-4.6923
chr11	40515327	40515428	protein_coding	Hmmr	utr3	ENSMUSG00000020330	ProperStrand	61	chr7	117189864	117189932	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	28	-19.5979
chr11	62416590	62416653	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	chr11	6519810	6519915	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	10	-13.6139
chr3	4645820	4645910	LINE	L1Md_F3	L1	chr3L1Md_F34645285	NonProperStrand	1	chr5	69189897	69189987	LINE	L1Md_F2	L1	chr5L1Md_F269189327	NonProperStrand	1	1	-inf
chr12	52987319	52987338	protein_coding	Heatr5a	intron	ENSMUSG00000035181	ProperStrand	21	chr17	35299507	35299534	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-6.8500
chr11	50110599	50110828	protein_coding	Canx	exon	ENSMUSG00000020368	ProperStrand	296	chr10	17443079	17443097	protein_coding	Cited2	utr5	ENSMUSG00000039910	ProperStrand	64	1	-9.9849
chr11	59041587	59041622	protein_coding	Arf1	utr5	ENSMUSG00000048076	ProperStrand	52	chr17	35299507	35299632	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	4	-15.7316
chr2	90235314	90235340	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	29116539	29123428	protein_coding	Supt5h	exon	ENSMUSG00000003435	ProperStrand	123	1	-3.1290
chr6	108313679	108319039	protein_coding	Itpr1	exon	ENSMUSG00000030102	ProperStrand	94	chr2	26766801	26766853	snoRNA	ENSMUSG00000065258_SNORD24	.	ENSMUSG00000065258	ProperStrand	130	1	-10.8585
chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	chr5	138610084	138610133	protein_coding	Mcm7	exon	ENSMUSG00000029730	ProperStrand	258	1	-6.9658
chr6	70794802	70794819	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chr11	120148960	120148976	protein_coding	Bahcc1	exon	ENSMUSG00000039741	NonProperStrand	268	1	-8.4262
chr6	122269492	122269934	protein_coding	Phc1	exon	ENSMUSG00000040669	ProperStrand	158	chr7	116664811	116664899	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	6	-8.3060
chr7	17502793	17502948	protein_coding	Calm3	exon	ENSMUSG00000019370	ProperStrand	28	chr11	4090398	4090487	protein_coding	Tbc1d10a	intron	ENSMUSG00000034412	ProperStrand	8	1	-18.2452
chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	chr10	75322171	75322207	protein_coding	Mif	utr3	ENSMUSG00000033307	ProperStrand	146	1	-7.9793
chr1	88253589	88253622	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chr1	9932550	9932597	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-2.1155
mmu-miR-1291	0	26	miRNA	mmu-miR-1291	.	mmu-miR-1291	ProperStrand	103	chr16	23111720	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.1165
chr12	102183813	102183862	protein_coding	Ccdc88c	exon	ENSMUSG00000021182	ProperStrand	151	chr16	30514154	30514171	protein_coding	Tmem44	utr3	ENSMUSG00000022537	ProperStrand	217	3	-inf
chr2	179920104	179920341	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr19	8799831	8799874	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-1.7299
chr7	16677708	16678201	protein_coding	Zfp541	exon	ENSMUSG00000078796	ProperStrand	33	chr17	13112514	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	8	-18.8673
chr1	162967751	162967781	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	chr9	64023228	64023286	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	1	-5.4231
chr11	51551287	51551381	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	chr17	24856723	24856741	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	2	-2.5931
chr7	148653276	148653294	lincRNA	Gm10575	exon	ENSMUSG00000073787	ProperStrand	25	chr8	114536001	114539240	protein_coding	Terf2ip	exon	ENSMUSG00000033430	ProperStrand	4	1	-19.5900
chr5	14252800	14252816	protein_coding	Sema3e	utr3	ENSMUSG00000063531	ProperStrand	125	chr12	17552948	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-3.6952
chr5	100855902	100855941	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	6	-15.7303
chr2	79132657	79132674	protein_coding-noncoding	Itga4	utr5	ENSMUSG00000027009	NonProperStrand	118	chr10	42298355	42298372	protein_coding	Nr2e1	intron	ENSMUSG00000019803	ProperStrand	32	1	-13.2246
chr9	56109025	56109073	protein_coding	C230081A13Rik	intron	ENSMUSG00000074305	ProperStrand	40	chr16	23110968	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.7072
chr10	121221627	121221684	protein_coding	Srgap1	utr3	ENSMUSG00000020121	ProperStrand	33	chr18	35716764	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-11.0559
chr1	73999833	73999923	protein_coding	Tns1	utr5	ENSMUSG00000055322	ProperStrand	63	chr12	112779167	112779247	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-4.6821
chr6	17977985	17978002	protein_coding	Wnt2	exon	ENSMUSG00000010797	NonProperStrand	1	chr1	162965531	162965576	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-inf
chr11	70421396	70421428	protein_coding	Mink1	exon	ENSMUSG00000020827	ProperStrand	113	chr4	122968588	122968675	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	3	-11.8539
chr13	56571792	56571809	protein_coding	Slc25a48	exon	ENSMUSG00000021509	ProperStrand	9	chr9	62771440	62799585	protein_coding	Pias1	exon	ENSMUSG00000032405	ProperStrand	13	1	-19.2772
chr11	120208122	120208308	protein_coding	Actg1	exon	ENSMUSG00000062825	ProperStrand	178	chr9	15119696	15119714	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-3.1440
chr1	134361915	134361978	protein_coding	Dstyk	utr3	ENSMUSG00000042046	ProperStrand	11	chr18	73693161	73693189	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-8.9451
chr5	143665590	143667026	protein_coding	Actb	exon	ENSMUSG00000029580	ProperStrand	446	chr7	116664802	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	11	-8.4045
chr9	63042015	63042031	protein_coding	Map2k5	exon	ENSMUSG00000058444	ProperStrand	193	chr11	62417006	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-3.7986
chr8	73032214	73032282	protein_coding	2810422J05Rik	utr3	ENSMUSG00000055553	ProperStrand	171	chr3	108357301	108357391	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-2.6208
chr8	34917231	34917322	protein_coding	Rbpms	exon	ENSMUSG00000031586	ProperStrand	58	chr1	63225677	63225705	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	3	-15.3161
chr4	49785126	49785143	protein_coding	Grin3a	intron	ENSMUSG00000039579	ProperStrand	2	chr16	23110940	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chrX	34454758	34472486	protein_coding	Sept6	intron	ENSMUSG00000050379	ProperStrand	29	chr16	23110901	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-3.5149
chr2	103606097	103606156	protein_coding	Caprin1	utr3	ENSMUSG00000027184	ProperStrand	145	chr8	48972476	48972494	protein_coding	Wwc2	exon	ENSMUSG00000031563	NonProperStrand	56	1	-11.6813
chr3	88373414	88373481	protein_coding	Ubqln4	utr3	ENSMUSG00000008604	NonProperStrand	2	chr16	11144335	11144408	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	1	-18.1559
chrX	100767009	100767025	non_coding	B230206F22Rik	.	ENSMUSG00000086370	NonProperStrand	20	chr11	120209319	120209367	protein_coding	Actg1	exon	ENSMUSG00000062825	ProperStrand	178	1	-13.3578
chr12	77679737	77679778	protein_coding	Plekhg3	utr3	ENSMUSG00000052609	ProperStrand	19	chr14	76247754	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	4	-19.1768
chr14	21533988	21534048	protein_coding	2310021P13Rik	exon	ENSMUSG00000021819	ProperStrand	11	chr14	55236186	55236204	protein_coding	Psmb5	intron	ENSMUSG00000022193	NonProperStrand	9	1	-19.9764
chr16	57391758	57391793	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr18	35716736	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	11	-1.5515
chr17	45570437	45570453	protein_coding	Cdc5l	utr5	ENSMUSG00000023932	NonProperStrand	1	chr11	55296276	55296332	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-inf
chr15	77794549	77795358	protein_coding	Eif3d	exon	ENSMUSG00000016554	ProperStrand	69	chrX	117811343	117811361	protein_coding	Pcdh11x	intron	ENSMUSG00000034755	ProperStrand	15	1	-15.8346
chr1	63351660	63356456	protein_coding	Zdbf2	exon	ENSMUSG00000027520	ProperStrand	72	chr16	23111373	23111503	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-2.0163
chr10	127523247	127526155	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr16	23111694	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	23	-15.0828
chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	chr9	15119631	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	9	-4.4073
chr11	80415108	80415125	protein_coding	Myo1d	exon	ENSMUSG00000035441	ProperStrand	144	chr15	79913301	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.0627
chr9	65677567	65677658	SINE	B1_Mm	Alu	chr9B1_Mm65677578	ProperStrand	1	chr7	105009242	105009322	protein_coding	Pak1	intron	ENSMUSG00000030774	NonProperStrand	4	1	-inf
chr9	15118245	15118378	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	chr15	34370542	34370678	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	170	-inf
chr11	102060738	102060754	protein_coding	Hdac5	exon	ENSMUSG00000008855	NonProperStrand	39	chr10	80654606	80654632	protein_coding	Dapk3	exon	ENSMUSG00000034974	ProperStrand	3	1	-20.0818
chr17	31762056	31762503	protein_coding	Cbs	exon	ENSMUSG00000024039	ProperStrand	12	chr10	23505169	23505249	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.9771
chr11	94153684	94153774	protein_coding	Luc7l3	utr3	ENSMUSG00000020863	ProperStrand	38	chr7	117189972	117190052	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-7.0225
chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	chr4	116828432	116828452	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-4.6314
chr13	109135524	109135577	protein_coding	Depdc1b	intron	ENSMUSG00000021697	ProperStrand	19	chr11	77995188	77995240	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-8.4897
chr1	90123798	90124639	protein_coding	Heatr7b1	utr5	ENSMUSG00000079429	ProperStrand	147	chr11	116938707	116938749	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-4.4212
chr2	172957823	172957841	antisense	1300015D01Rik	.	ENSMUSG00000087382	ProperStrand	34	chr11	69483136	69483254	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-8.6886
chr4	41261747	41261763	protein_coding	Dcaf12	utr5	ENSMUSG00000028436	ProperStrand	33	chr8	113362430	113362448	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	1	-10.4709
chr17	35973172	35973658	protein_coding	Tubb5	exon	ENSMUSG00000001525	NonProperStrand	5	chr19	3714623	3715651	protein_coding	1810055G02Rik	utr5	ENSMUSG00000035372	NonProperStrand	15	1	-20.1544
chr4	43505842	43505931	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chrX	54044602	54044619	protein_coding	Fhl1	exon	ENSMUSG00000023092	NonProperStrand	4	1	-8.5468
chr2	73166930	73166947	protein_coding	Scrn3	intron	ENSMUSG00000008226	NonProperStrand	22	chr1	162965551	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.1855
chr5	24215275	24215375	protein_coding	Nub1	utr3	ENSMUSG00000028954	ProperStrand	32	chr19	8799036	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-7.0802
chr2	160792432	160793569	protein_coding	Chd6	exon	ENSMUSG00000057133	ProperStrand	104	chr3	123210906	123210972	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.2396
chr7	117147181	117147213	snRNA	ENSMUSG00000065389_U1	.	ENSMUSG00000065389	ProperStrand	12	chr16	23111777	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.8390
chr16	16323855	16324068	protein_coding	Dnm1l	exon	ENSMUSG00000022789	NonProperStrand	38	chr8	96696755	96697069	protein_coding	Mt2	exon	ENSMUSG00000031762	ProperStrand	71	1	-13.9031
chr7	76090488	76090505	SINE	MIR	MIR	chr7MIR76090403	NonProperStrand	1	chr5	34372996	34373012	protein_coding	Poln	intron	ENSMUSG00000045102	NonProperStrand	3	1	-inf
chr3	88786496	88788223	protein_coding	Ash1l	exon	ENSMUSG00000028053	ProperStrand	30	chr4	131865864	131865951	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-5.1112
chr7	145833484	145833574	DNA	MER81	AcHobo	chr7MER81145833487	ProperStrand	1	chr7	145833069	145833149	LTR	MTD	MaLR	chr7MTD145833031	ProperStrand	1	1	-inf
chr13	109972745	109972764	protein_coding	Pde4d	intron	ENSMUSG00000021699	NonProperStrand	36	chr7	149170854	149171340	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	1	-12.2790
chr18	65345722	65345766	protein_coding	Nedd4l	intron	ENSMUSG00000024589	ProperStrand	44	chr10	79013111	79013128	protein_coding	Mier2	exon	ENSMUSG00000042570	NonProperStrand	3	1	-inf
chr5	122910159	122952099	protein_coding	Atp2a2	utr5	ENSMUSG00000029467	ProperStrand	166	chr4	131908236	131908418	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-1.3337
chr5	104470678	104470723	SINE	B1_Mur3	Alu	chr5B1_Mur3104470634	ProperStrand	1	chr4	107717399	107720212	protein_coding	Scp2	exon	ENSMUSG00000028603	ProperStrand	23	1	-inf
chr13	30338190	30338207	protein_coding	Mboat1	utr3	ENSMUSG00000038732	NonProperStrand	148	chr7	116663693	116663758	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.1258
chr19	53308400	53309301	protein_coding	Add3	exon	ENSMUSG00000025026	ProperStrand	27	chr4	131865856	131865925	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.1241
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr10	80644020	80644093	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-1.9861
chr3	137849424	137849440	protein_coding	4930579F01Rik	utr5	ENSMUSG00000012042	NonProperStrand	156	chr1	40067464	40070961	protein_coding	Map4k4	exon	ENSMUSG00000026074	ProperStrand	348	1	-7.8814
chr4	149022075	149022102	protein_coding	Clstn1	utr3	ENSMUSG00000039953	ProperStrand	173	chr16	23111394	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-1.0187
chr19	47180814	47180898	protein_coding	Pdcd11	exon	ENSMUSG00000025047	ProperStrand	137	chr7	116664812	116664843	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.2582
chr13	23673726	23673816	protein_coding	Hist1h4d	utr3	ENSMUSG00000061482	ProperStrand	57	chr2	26493405	26493485	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	6	-19.1376
chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	chr12	31982617	31983694	protein_coding	Lamb1	exon	ENSMUSG00000002900	ProperStrand	87	1	-9.1281
chr6	91442283	91442346	protein_coding	Xpc	exon	ENSMUSG00000030094	ProperStrand	19	chrX	56358179	56358196	protein_coding	Fgf13	intron	ENSMUSG00000031137	ProperStrand	39	1	-16.4396
chr11	62590591	62590635	protein_coding	Zfp286	intron	ENSMUSG00000047342	NonProperStrand	11	chr11	69481374	69481464	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	4	-21.4777
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	3	-3.5557
chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	2	-5.3909
chr8	112363232	112363275	snoRNA	ENSMUSG00000077549_Snord71	.	ENSMUSG00000077549	ProperStrand	196	chr17	24857750	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	8	-9.4486
chr5	104869161	104869210	protein_coding	Spp1	intron	ENSMUSG00000029304	ProperStrand	52	chr4	116883448	116883538	snRNA	ENSMUSG00000070237_U5	.	ENSMUSG00000070237	ProperStrand	154	1	-11.7101
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	5	-12.7251
chr2	66980761	66980778	LTR	RMER19B	ERVK	chr2RMER19B66980263	ProperStrand	35	chr14	33005085	33005139	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-5.0270
chr5	149862187	149862299	protein_coding	Hmgb1	exon	ENSMUSG00000066551	ProperStrand	99	chr5	130300520	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.6956
chr7	52975740	52975810	protein_coding	Rpl18	exon	ENSMUSG00000059070	ProperStrand	116	chr4	3762227	3762277	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	1	-8.1699
chr8	72857303	72857807	protein_coding	Upf1	exon	ENSMUSG00000058301	ProperStrand	90	chr4	116827119	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-6.2379
chr9	106791438	106791535	protein_coding	Manf	exon	ENSMUSG00000032575	ProperStrand	63	chr4	131908687	131908738	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.1581
chr2	130101987	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	chr19	8800087	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	4	-3.4005
chr4	151680901	151680968	protein_coding	Icmt	utr3	ENSMUSG00000039662	ProperStrand	48	chr16	23111384	23111474	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.5796
chr6	124882469	124882487	protein_coding	Mlf2	exon	ENSMUSG00000030120	ProperStrand	80	chr17	35299507	35299642	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	2	-7.0674
chr11	120134685	120134701	protein_coding	Bahcc1	exon	ENSMUSG00000039741	ProperStrand	118	chr10	127513132	127513168	protein_coding	Ptges3	utr3	ENSMUSG00000071072	ProperStrand	89	1	-11.1630
chr14	8726694	8726711	protein_coding	Flnb	exon	ENSMUSG00000025278	ProperStrand	124	chr9	120038467	120038528	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.8157
chr11	6328282	6328372	protein_coding	H2afv	utr3	ENSMUSG00000041126	ProperStrand	4	chr5	121655034	121655114	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-9.2889
chr3	100750649	100750739	protein_coding-noncoding	Ttf2	utr3	ENSMUSG00000033222	ProperStrand	24	chr2	26493402	26493482	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-5.5073
chr7	73208671	73214058	protein_coding	Snrpa1	exon	ENSMUSG00000030512	ProperStrand	71	chr8	90867530	90869089	protein_coding	Brd7	exon	ENSMUSG00000031660	ProperStrand	10	1	-16.6317
chr15	79908957	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	chr14	52829478	52829568	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	2	-2.0678
chr5	108931778	108931862	protein_coding	Pcgf3	utr3	ENSMUSG00000033623	ProperStrand	17	chr7	116664812	116664902	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-4.8991
chr9	61221033	61221094	protein_coding	Tle3	utr5	ENSMUSG00000032280	ProperStrand	88	chr8	125626932	125626982	snoRNA	ENSMUSG00000064450_Snord68	.	ENSMUSG00000064450	ProperStrand	181	1	-10.3287
chr11	16908628	16908644	protein_coding	Plek	utr5	ENSMUSG00000020120	NonProperStrand	5	chr9	43047662	43047678	protein_coding	Oaf	utr5	ENSMUSG00000032014	NonProperStrand	11	1	-19.0787
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr17	35087895	35087958	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	2	-3.0942
chr4	147475493	147475509	protein_coding	2610109H07Rik	utr3	ENSMUSG00000029005	NonProperStrand	46	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-7.7335
chr14	70552503	70552519	protein_coding	2610301G19Rik	exon	ENSMUSG00000033712	ProperStrand	49	chr14	33005138	33005176	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-4.3775
chr9	39358287	39358304	protein_coding	Olfr958	exon	ENSMUSG00000050853	NonProperStrand	266	chrX	84483704	84483723	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-5.3105
chr9	15130739	15130985	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	chr9	15130703	15130759	snoRNA	ENSMUSG00000077506_Scarna9	.	ENSMUSG00000077506	ProperStrand	148	35	-19.8437
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr1	145506238	145506255	protein_coding	Cdc73	intron	ENSMUSG00000026361	NonProperStrand	26	1	-7.5698
chr4	123188273	123188441	protein_coding	Macf1	exon	ENSMUSG00000028649	ProperStrand	320	chr4	154448393	154448450	protein_coding	Rer1	utr3	ENSMUSG00000029048	ProperStrand	9	1	-13.8457
chr16	4878498	4878520	protein_coding-noncoding	Fam100a	utr3	ENSMUSG00000039568	ProperStrand	3	chr11	69483136	69483247	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-14.4332
chr2	32485771	32485790	protein_coding	Ak1	exon	ENSMUSG00000026817	ProperStrand	33	chr12	77066968	77066984	protein_coding	Syne2	exon	ENSMUSG00000063450	ProperStrand	63	1	-14.4209
chr9	90761418	90761508	LINE	L1Md_F2	L1	chr9L1Md_F290760975	ProperStrand	1	chr7	137507548	137507628	protein_coding	Fgfr2	intron	ENSMUSG00000030849	NonProperStrand	95	1	-inf
chr2	87802622	87802639	protein_coding	Olfr1157	exon	ENSMUSG00000075143	NonProperStrand	49	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-6.0625
chr2	121189551	121189571	protein_coding	Strc	utr3	ENSMUSG00000033498	NonProperStrand	11	chr9	120038495	120038520	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-6.3233
chr7	135120744	135121684	protein_coding	Fus	exon	ENSMUSG00000030795	ProperStrand	162	chr7	52381973	52382009	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-4.7716
chr5	126668540	126668559	SINE	B4	B4	chr5B4126668510	ProperStrand	3	chr6	28674941	28695198	protein_coding	Snd1	exon	ENSMUSG00000001424	ProperStrand	210	1	-17.3212
chr13	54676636	54677124	protein_coding	Arl10	exon	ENSMUSG00000025870	ProperStrand	9	chrX	34622947	34623024	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-6.8852
chr9	78023110	78023148	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr16	5021479	5026615	protein_coding	Glyr1	exon	ENSMUSG00000022536	ProperStrand	60	2	-9.5753
chr3	95749178	95749268	protein_coding	Anp32e	utr3	ENSMUSG00000015749	ProperStrand	25	chr7	117189945	117190025	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.9939
chr13	24824232	24824248	protein_coding	Fam65b	utr3	ENSMUSG00000036006	ProperStrand	51	chr4	138974416	138974473	protein_coding	Ubr4	exon	ENSMUSG00000066036	ProperStrand	304	1	-10.3885
chr3	127382745	127382761	protein_coding	Alpk1	exon	ENSMUSG00000028028	ProperStrand	19	chr17	39985560	39985647	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-8.2351
chr9	35023554	35023570	protein_coding	Srpr	exon	ENSMUSG00000032042	ProperStrand	54	chr16	23111451	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.4069
chr1	71670870	71699623	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr10	23505558	23505623	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	2	-4.1767
chr2	22812622	22816245	protein_coding	Abi1	exon	ENSMUSG00000058835	ProperStrand	24	chr9	120039583	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-5.0594
chr16	87416193	87416283	protein_coding	Ltn1	exon	ENSMUSG00000052299	ProperStrand	49	chr2	26493396	26493486	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-4.1229
chr4	41148555	41160835	protein_coding	Ubap2	exon	ENSMUSG00000028433	ProperStrand	292	chr7	29136551	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-0.7816
chr3	153574597	153574655	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	chr17	24857716	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	3	-0.8702
chr5	104868491	104869263	protein_coding	Spp1	exon	ENSMUSG00000029304	ProperStrand	52	chr16	23111747	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-8.0565
chr8	73979265	73979282	LTR	RLTR20B3	ERVK	chr8RLTR20B373979244	ProperStrand	4	chr17	36120446	36120489	protein_coding	Gnl1	exon	ENSMUSG00000024429	ProperStrand	70	1	-18.4375
chr15	76734512	76734528	protein_coding	Rpl8	utr5	ENSMUSG00000003970	NonProperStrand	7	chr9	15117019	15117102	snoRNA	ENSMUSG00000077614_SNORA40	.	ENSMUSG00000077614	ProperStrand	54	4	-inf
chr1	135601759	135601808	protein_coding	Atp2b4	utr3	ENSMUSG00000026463	ProperStrand	42	chr19	8799053	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	2	-10.5815
chrX	34335763	34336844	protein_coding	Slc25a5	exon	ENSMUSG00000016319	ProperStrand	55	chr19	8963083	8963173	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	8	-19.3439
mmu-miR-5100	5	20	miRNA	mmu-miR-5100	.	mmu-miR-5100	ProperStrand	132	chr12	17552949	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	3	-8.8780
chr7	87872776	87872866	protein_coding	Iqgap1	intron	ENSMUSG00000030536	ProperStrand	43	chr10	61810835	61810925	protein_coding	Hk1	intron	ENSMUSG00000037012	ProperStrand	84	1	-13.3134
chr10	7383389	7383405	protein_coding	Pcmt1	utr5	ENSMUSG00000019795	ProperStrand	55	chr15	79908965	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-5.6429
chr14	87912331	87912363	protein_coding	Tdrd3	utr3	ENSMUSG00000022019	ProperStrand	19	chr7	117189876	117189943	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-5.5364
chr11	53678881	53678898	protein_coding	Slc22a5	utr3	ENSMUSG00000018900	ProperStrand	9	chr4	131908282	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-8.1084
chr11	101417562	101420889	protein_coding	Nbr1	exon	ENSMUSG00000017119	ProperStrand	91	chr10	39978422	39978483	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	7	-20.0719
chr9	109778172	109778282	protein_coding	Cdc25a	utr5	ENSMUSG00000032477	ProperStrand	27	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	4	-12.6541
chr18	67666258	67666338	protein_coding	Spire1	exon	ENSMUSG00000024533	ProperStrand	14	chr9	15119675	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.3767
chr17	47928467	47928485	protein_coding	Tfeb	exon	ENSMUSG00000023990	ProperStrand	78	chr19	44188368	44188432	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	1	-7.2724
chr13	107737279	107737359	protein_coding	Dimt1	utr5	ENSMUSG00000021692	ProperStrand	185	chrX	160866560	160866788	protein_coding	Piga	exon	ENSMUSG00000031381	ProperStrand	4	1	-16.7102
chr7	52378398	52378481	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	chr15	34370545	34370675	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	3	-1.1005
chr9	15119630	15119730	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	chr7	127978999	127979046	tRNA	tRNA861-LeuTAG	.	899771	ProperStrand	49	1	-2.9863
chr13	100553936	100553954	LTR	MLT1C	MaLR	chr13MLT1C100553721	ProperStrand	1	chr19	8798740	8798817	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-inf
chr11	5871176	5871276	protein_coding	Camk2b	utr3	ENSMUSG00000057897	ProperStrand	14	chr16	23111450	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-12.7431
chr13	64863287	64863304	protein_coding	Cntnap3	exon	ENSMUSG00000033063	ProperStrand	87	chr7	116664793	116664869	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-5.3611
chr17	45707213	45707235	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	1	-1.1211
chr9	99312020	99336743	protein_coding	Mras	utr5	ENSMUSG00000032470	NonProperStrand	1	chr4	135606227	135606273	protein_coding	Rpl11	exon	ENSMUSG00000059291	ProperStrand	152	1	-inf
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	107810701	107813856	protein_coding	Mst1r	exon	ENSMUSG00000032584	NonProperStrand	30	1	-5.8128
chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	chr2	26768394	26768433	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	3	-2.0750
chr8	126532102	126532118	protein_coding	Taf5l	exon	ENSMUSG00000038697	ProperStrand	23	chr2	144087414	144087463	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-8.4683
chr1	183702751	183702841	LTR	MTEb	MaLR	chr1MTEb183702744	NonProperStrand	1	chr1	183702572	183702652	Simple_repeat	(CA)n	Simple_repeat	chr1(CA)n183702444	ProperStrand	1	1	-inf
chr2	118752286	118752387	protein_coding	Chst14	utr5	ENSMUSG00000074916	ProperStrand	32	chr18	35716854	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.2677
chr11	57861360	57861557	protein_coding	Larp1	exon	ENSMUSG00000037331	ProperStrand	201	chr5	111121084	111121164	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-4.0949
chr13	93051860	93051938	protein_coding	Msh3	intron	ENSMUSG00000014850	ProperStrand	10	chr9	15118256	15118323	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	4	-inf
chr11	55302683	55313505	protein_coding	G3bp1	exon	ENSMUSG00000018583	ProperStrand	106	chr16	23110918	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-1.9219
chr8	87359200	87359254	protein_coding	Gadd45gip1	utr3	ENSMUSG00000033751	ProperStrand	45	chr16	23110545	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.9643
chr19	60849447	60849547	protein_coding	Eif3a	exon	ENSMUSG00000024991	ProperStrand	287	chr1	162965548	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-0.8449
chr17	23952743	23952814	protein_coding	Srrm2	exon	ENSMUSG00000039218	ProperStrand	521	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	7	-11.8818
chr7	106628077	106628124	snoRNA	ENSMUSG00000064966_Snord15b	.	ENSMUSG00000064966	ProperStrand	74	chr18	35716717	35716753	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.8323
chr7	16534822	16534839	protein_coding	Ehd2	utr3	ENSMUSG00000074364	NonProperStrand	197	chr15	82980133	82980192	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-4.8113
chr7	51505224	51505304	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	chr17	24856620	24856710	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	10	-19.5762
chr2	179769690	179769725	protein_coding	Lsm14b	utr3	ENSMUSG00000039108	ProperStrand	26	chr3	123210854	123210889	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-6.0485
chr1	183948685	183948736	protein_coding	Enah	intron	ENSMUSG00000022995	ProperStrand	196	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-1.5836
chr8	46439259	46439275	protein_coding	Fam149a	exon	ENSMUSG00000070044	ProperStrand	57	chr16	23110455	23110508	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.5495
chr7	116663605	116663669	protein_coding-noncoding	Rpl27a	utr5	ENSMUSG00000046364	NonProperStrand	1	chr11	97642952	97642980	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	NonProperStrand	10	1	-inf
chrX	35785028	35785128	protein_coding	Lamp2	exon	ENSMUSG00000016534	ProperStrand	19	chr11	106362336	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-8.1438
chr7	28157297	28157347	protein_coding	Spnb4	exon	ENSMUSG00000011751	ProperStrand	39	chr1	162967499	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.2823
chr7	73432127	73432145	protein_coding	Lrrk1	intron	ENSMUSG00000015133	ProperStrand	4	chr2	26494773	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-8.5876
chr3	155715361	155715382	LINE	Lx4A	L1	chr3Lx4A155714407	NonProperStrand	9	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-12.8112
chr7	20494529	20494606	protein_coding	Pvr	exon	ENSMUSG00000040511	ProperStrand	4	chr4	131908687	131908750	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-6.2660
chr15	98604924	98606960	protein_coding	Wnt10b	exon	ENSMUSG00000022996	NonProperStrand	189	chr14	52829461	52829561	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-5.9298
chr4	43505656	43505719	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr19	30220238	30225916	protein_coding	Gldc	exon	ENSMUSG00000024827	ProperStrand	175	2	-2.5301
chr2	172183918	172183937	protein_coding	Aurka	intron	ENSMUSG00000027496	NonProperStrand	1	chr8	124121213	124121308	protein_coding	Map1lc3b	utr3	ENSMUSG00000031812	NonProperStrand	1	1	-inf
chr4	43505719	43505809	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr11	93813258	93813310	protein_coding	Gm20390	exon	ENSMUSG00000091228	ProperStrand	33	1	-4.1792
chr16	5577615	5577632	LTR	RMER5	ERV1	chr16RMER55577610	NonProperStrand	6	chr15	75894913	75894939	protein_coding	Scrib	exon	ENSMUSG00000022568	ProperStrand	154	1	-16.1428
chr4	43429534	43429581	protein_coding	Rusc2	exon	ENSMUSG00000035969	ProperStrand	22	chr3	123210853	123210894	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.8504
chr6	50283214	50283231	protein_coding	Osbpl3	exon	ENSMUSG00000029822	NonProperStrand	31	chr15	79908997	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-6.7787
chr17	25080106	25080135	protein_coding	Hn1l	utr3	ENSMUSG00000024165	ProperStrand	45	chr16	23111690	23111759	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.3757
chr8	125935499	125942003	protein_coding	Tubb3	utr5	ENSMUSG00000062380	ProperStrand	8	chr1	89681232	89681322	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-9.5317
chr3	106524814	106524830	protein_coding	4933421E11Rik	utr5	ENSMUSG00000056260	ProperStrand	18	chr16	23111374	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-8.3413
chr2	90235299	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	131783331	131783349	protein_coding	Wbscr17	utr5	ENSMUSG00000034040	NonProperStrand	11	1	-7.8469
chrX	159329081	159329171	LINE	L1MB3	L1	chrXL1MB3159329071	NonProperStrand	1	chrX	159328956	159329046	SINE	B1_Mus1	Alu	chrXB1_Mus1159328922	NonProperStrand	1	1	-inf
chr17	24869755	24869771	protein_coding	Rpl3l	utr5	ENSMUSG00000002500	NonProperStrand	56	chr3	123210853	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.1794
chr2	129998645	129998715	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr18	57400307	57400324	protein_coding	Megf10	exon	ENSMUSG00000024593	ProperStrand	143	1	-6.3854
chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	chr11	106362303	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	2	-3.6934
chr10	90581059	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	chr3	95980315	95980405	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	4	-1.3485
chr17	56459678	56459828	protein_coding	Uhrf1	exon	ENSMUSG00000001228	ProperStrand	229	chr3	85904465	85904521	snoRNA	ENSMUSG00000065847_SNORA32	.	ENSMUSG00000065847	ProperStrand	40	1	-11.4455
chrX	7648094	7648134	protein_coding	Suv39h1	exon	ENSMUSG00000039231	ProperStrand	24	chr9	120037933	120038028	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-6.5078
chr2	90235292	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	25322315	25322336	protein_coding	Irgq	utr3	ENSMUSG00000041037	ProperStrand	19	1	-6.7268
chr1	129827575	129827598	protein_coding	Rab3gap1	exon	ENSMUSG00000036104	ProperStrand	19	chr11	69481333	69481378	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.3947
chr10	23505539	23506644	protein_coding	Rps12	intron	ENSMUSG00000061983	ProperStrand	309	chr11	6520321	6520442	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	5	-18.1187
chr18	89063575	89063593	protein_coding	Socs6	utr5	ENSMUSG00000056153	NonProperStrand	7	chr3	68889099	68889145	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-7.5114
chr12	103636472	103636534	protein_coding	Lgmn	exon	ENSMUSG00000021190	ProperStrand	18	chr19	37362686	37365178	protein_coding	Ide	exon	ENSMUSG00000056999	ProperStrand	19	1	-17.9943
chr1	133252403	133252451	protein_coding	Srgap2	intron	ENSMUSG00000026425	ProperStrand	299	chr9	120038576	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	6	-6.1984
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	108240153	108240210	protein_coding	Rhoa	utr3	ENSMUSG00000007815	ProperStrand	45	2	-8.2816
chr5	34084633	34084649	protein_coding	Letm1	utr3	ENSMUSG00000005299	NonProperStrand	145	chr17	35283056	35283111	protein_coding	Bag6	exon	ENSMUSG00000024392	ProperStrand	181	1	-9.3288
chr5	72611208	72611260	lincRNA	Atp10d	intron	ENSMUSG00000046808	ProperStrand	13	chr4	131908810	131908891	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-6.5299
chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	chr8	23280774	23280839	protein_coding	Ckap2	intron	ENSMUSG00000037725	ProperStrand	69	1	-9.2990
chr17	13184992	13185015	protein_coding	Wtap	utr5	ENSMUSG00000060475	ProperStrand	119	chr18	33954816	33954895	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-2.2984
chr7	118217654	118217677	protein_coding	Eif4g2	exon	ENSMUSG00000005610	ProperStrand	134	chr4	131866154	131866290	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	3	-6.0292
chrX	70886878	70886968	protein_coding	Dusp9	exon	ENSMUSG00000031383	ProperStrand	12	chr9	120038532	120038612	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-6.1449
chr6	71824609	71824699	protein_coding	Immt	exon	ENSMUSG00000052337	ProperStrand	48	chr15	57978173	57978253	snoRNA	ENSMUSG00000080461_SNORA11	.	ENSMUSG00000080461	ProperStrand	171	1	-11.6614
chrX	160347488	160347504	protein_coding	Ap1s2	intron	ENSMUSG00000031367	ProperStrand	52	chr9	120039659	120039679	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.5815
chr2	142894129	142896664	protein_coding	Snrpb2	exon	ENSMUSG00000008333	ProperStrand	11	chr8	32260335	32260370	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-8.0215
chr6	124791245	124791261	protein_coding	Leprel2	utr3	ENSMUSG00000023191	ProperStrand	44	chr16	23111450	23111501	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.7117
chr11	119136228	119136244	protein_coding	Gaa	exon	ENSMUSG00000025579	NonProperStrand	201	chr10	23505550	23505626	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-5.1717
chr4	63131699	63131799	protein_coding	Whrn	intron	ENSMUSG00000039137	ProperStrand	20	chr16	23109051	23109093	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-9.4967
chr13	22135127	22135226	protein_coding	Hist1h2bj	exon	ENSMUSG00000069300	ProperStrand	13	chr16	23111778	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.6795
chr19	47695231	47695331	protein_coding	Slk	exon	ENSMUSG00000025060	ProperStrand	27	chr17	24857827	24857851	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.7240
chr1	192712615	192712631	protein_coding	Rps6kc1	exon	ENSMUSG00000089872	ProperStrand	241	chr7	52382019	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-4.0189
chr12	3227500	3227519	SINE	MIRm	MIR	chr12MIRm3227466	NonProperStrand	21	chr18	35716684	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-10.0007
chr13	84268652	84268669	LINE	L1MA6	L1	chr13L1MA684268245	ProperStrand	2	chr16	31257793	31257849	protein_coding	Ppp1r2	intron	ENSMUSG00000047714	ProperStrand	10	1	-inf
chr4	138955550	138955721	protein_coding	Ubr4	exon	ENSMUSG00000066036	ProperStrand	304	chr2	26493391	26493491	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-1.0864
chr1	120733965	120733983	protein_coding	Gli2	exon	ENSMUSG00000048402	NonProperStrand	14	chr1	162966812	162966849	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-9.1944
chr14	80262508	80262525	lincRNA	Gm6999	intron	ENSMUSG00000075495	ProperStrand	265	chr10	127565824	127565924	protein_coding	Baz2a	utr3	ENSMUSG00000040054	ProperStrand	274	1	-7.3042
chr6	124468356	124468446	protein_coding	C1ra	intron	ENSMUSG00000055172	ProperStrand	1	chr9	111216244	111216334	protein_coding	Trank1	intron	ENSMUSG00000062296	ProperStrand	7	1	-inf
chr1	95684321	95684373	protein_coding	Atg4b	utr3	ENSMUSG00000026280	ProperStrand	13	chr1	162968468	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	2	-14.6281
chr2	163879345	163879445	protein_coding	Tomm34	utr3	ENSMUSG00000018322	ProperStrand	10	chr12	78058293	78058325	protein_coding	Max	intron	ENSMUSG00000059436	ProperStrand	7	1	-inf
chrX	42884761	42884778	LINE	L1_Mur3	L1	chrXL1_Mur342884763	NonProperStrand	11	chr1	88247737	88247809	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-8.5056
chr12	82317769	82317785	protein_coding	Slc8a3	exon	ENSMUSG00000079055	ProperStrand	126	chr4	131865917	131865983	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.7678
chr15	5066629	5067308	protein_coding	Rpl37	utr5	ENSMUSG00000041841	ProperStrand	69	chr7	148634766	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-3.7247
chr9	108465977	108466968	protein_coding	Impdh2	exon	ENSMUSG00000062867	ProperStrand	74	chr18	35102300	35102342	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-6.1757
chr16	37384897	37384913	protein_coding	Stxbp5l	utr5	ENSMUSG00000022829	ProperStrand	332	chr12	70473548	70473613	protein_coding	Arf6	utr5	ENSMUSG00000044147	ProperStrand	32	1	-11.1543
chr4	139482849	139482865	lincRNA	4933427I22Rik	exon	ENSMUSG00000085928	ProperStrand	62	chr4	131865866	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.7173
chr7	25672221	25672277	protein_coding-noncoding	Rps19	utr5	ENSMUSG00000040952	ProperStrand	4	chr16	23110913	23110955	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-12.7696
chr2	91487875	91487955	protein_coding	Zfp408	exon	ENSMUSG00000075040	ProperStrand	4	chr19	8963026	8963116	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-12.7372
chrX	71517822	71517951	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	chr11	69482352	69482374	snoRNA	ENSMUSG00000089542_snoU6-77	.	ENSMUSG00000089542	ProperStrand	138	1	-4.9174
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr5	116010909	116010966	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	1	-4.6447
chr10	12341172	12353751	protein_coding	Utrn	exon	ENSMUSG00000019820	ProperStrand	69	chr6	30452101	30455748	protein_coding	Tmem209	exon	ENSMUSG00000029782	ProperStrand	36	1	-14.0650
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-3.2485
chr1	59539683	59539700	protein_coding	Fzd7	utr5	ENSMUSG00000041075	ProperStrand	373	chr5	108334195	108334306	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-1.5974
chr11	53943016	53943033	protein_coding	P4ha2	exon	ENSMUSG00000018906	ProperStrand	8	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-12.7259
chr5	137303749	137303767	protein_coding	Emid2	intron	ENSMUSG00000004415	NonProperStrand	38	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.0389
chr19	4290151	4290426	protein_coding	Adrbk1	exon	ENSMUSG00000024858	ProperStrand	37	chr10	23505152	23505202	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.9550
chr11	80080111	80080158	protein_coding	Rhot1	utr3	ENSMUSG00000017686	ProperStrand	40	chr7	117190025	117190062	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	3	-9.9640
chr9	15130706	15130796	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	chr5	121655017	121655097	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	4	-3.2626
chr9	54619897	54619933	protein_coding	Crabp1	intron	ENSMUSG00000032291	ProperStrand	8	chr10	23505192	23505282	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-16.0979
chr11	120399100	120399122	protein_coding	Gcgr	intron	ENSMUSG00000025127	ProperStrand	5	chr4	116827803	116827843	snoRNA	ENSMUSG00000064751_SNORD46	.	ENSMUSG00000064751	ProperStrand	132	1	-16.7967
chr9	69972993	69973998	protein_coding	Fam81a	exon	ENSMUSG00000032224	ProperStrand	59	chr2	130102051	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-5.3894
chrX	34624006	34624026	protein_coding	Rpl39	exon	ENSMUSG00000079641	ProperStrand	37	chr12	17552960	17553032	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	3	-13.9376
chr17	28466335	28466384	protein_coding	Rpl10a	exon	ENSMUSG00000037805	ProperStrand	121	chr17	39985195	39985258	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	2	-7.5843
chr8	97374230	97374247	protein_coding	Coq9	intron	ENSMUSG00000031782	NonProperStrand	11	chr7	52305192	52305288	protein_coding	Prr12	exon	ENSMUSG00000046574	ProperStrand	86	1	-16.0471
chr11	60556264	60556309	protein_coding	Top3a	exon	ENSMUSG00000002814	ProperStrand	28	chr10	90459970	90460060	protein_coding	Apaf1	exon	ENSMUSG00000019979	ProperStrand	27	1	-16.4796
chr16	35769301	35769318	protein_coding	Dirc2	exon	ENSMUSG00000022848	ProperStrand	17	chr18	32047950	32048010	protein_coding	Wdr33	exon	ENSMUSG00000024400	ProperStrand	48	1	-16.3137
chr2	170337006	170337022	protein_coding	Pfdn4	utr5	ENSMUSG00000052033	ProperStrand	55	chr19	8799048	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-6.0037
chr9	64022850	64022921	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	chr1	39605591	39605617	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-2.3505
chr16	93832396	93832412	protein_coding	Morc3	utr5	ENSMUSG00000039456	NonProperStrand	33	chr11	62416950	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-7.2315
chr9	59513167	59513686	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr11	4820972	4820990	protein_coding	Thoc5	intron	ENSMUSG00000034274	ProperStrand	325	1	-3.9019
chr15	77597977	77597993	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr16	90771726	90772835	protein_coding	Urb1	exon	ENSMUSG00000039929	ProperStrand	71	1	-8.4708
chr6	47731696	47731723	misc_RNA	Y_RNA	.	ENSMUSG00000064945	ProperStrand	93	chr16	23111383	23111435	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-1.4952
chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	chr6	125111997	125112024	protein_coding	Gapdh	utr3	ENSMUSG00000057666	ProperStrand	356	1	-5.6808
chr10	127521383	127521400	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr18	46758347	46767223	protein_coding	Eif1a	utr5	ENSMUSG00000057561	ProperStrand	44	3	-19.8859
chr6	51417289	51419724	protein_coding	Hnrnpa2b1	utr5	ENSMUSG00000004980	ProperStrand	166	chr4	131865413	131865503	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-2.1910
chr2	166661704	166661794	protein_coding	Arfgef2	exon	ENSMUSG00000074582	ProperStrand	32	chr12	17552948	17553030	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-6.3255
chr9	20717092	20718348	protein_coding	Dnmt1	exon	ENSMUSG00000004099	NonProperStrand	12	chr14	76247723	76247823	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	5	-21.0152
chr10	29333753	29333772	LINE	L1MD	L1	chr10L1MD29333593	NonProperStrand	2	chr9	21351375	21351516	protein_coding	Carm1	utr5	ENSMUSG00000032185	ProperStrand	82	1	-19.5227
chr3	96361995	96364664	protein_coding	Txnip	exon	ENSMUSG00000038393	ProperStrand	172	chr4	131908687	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-2.3835
chr1	155287314	155287356	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	chr8	129468754	129468834	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-0.8603
chr2	152607214	152607249	protein_coding	Bcl2l1	utr3	ENSMUSG00000007659	ProperStrand	9	chr11	69483136	69483250	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-10.0340
chr13	40982774	40982790	protein_coding	Gcnt2	exon	ENSMUSG00000021360	ProperStrand	31	chr8	98269959	98270096	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-6.8487
chr6	113093727	113093755	protein_coding	Setd5	exon	ENSMUSG00000034269	ProperStrand	162	chr16	43886850	43886929	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	5	-18.8529
chr15	36531142	36538539	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr5	121655016	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	7	-3.5276
chr4	43505802	43505820	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr9	115160011	115160848	protein_coding	Stt3b	exon	ENSMUSG00000032437	ProperStrand	66	1	-2.9004
chr8	87577530	87579566	protein_coding	Tnpo2	exon	ENSMUSG00000031691	ProperStrand	92	chr10	23505152	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-3.6879
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr4	131866157	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	5	-1.6099
chr15	89388501	89388535	protein_coding	Shank3	exon	ENSMUSG00000022623	ProperStrand	19	chr4	136508829	136508850	protein_coding	Epha8	intron	ENSMUSG00000028661	ProperStrand	13	1	-18.8140
chr12	104317206	104317223	protein_coding	Unc79	exon	ENSMUSG00000021198	ProperStrand	99	chr18	35716804	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.3964
chr5	115547424	115547514	protein_coding	Sppl3	utr3	ENSMUSG00000029550	ProperStrand	33	chr7	116664812	116664892	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.6237
chr6	100185966	100186056	protein_coding	Rybp	intron	ENSMUSG00000072872	ProperStrand	51	chr5	130295428	130295508	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-5.5658
chr7	13516163	13516209	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr11	62416602	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	3	-3.5557
chr4	43505656	43505721	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr17	24192934	24192983	protein_coding	Kctd5	exon	ENSMUSG00000016946	ProperStrand	17	6	-inf
chr1	71633448	71665207	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr7	148634698	148634795	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	3	-0.9095
chr17	54889843	54889933	LINE	L1_Rod	L1	chr17L1_Rod54889268	NonProperStrand	1	chr17	54890055	54890135	LINE	L1_Rod	L1	chr17L1_Rod54889926	NonProperStrand	1	1	-inf
chr11	68067261	68067277	protein_coding	Ntn1	intron	ENSMUSG00000020902	NonProperStrand	194	chr7	108440949	108440967	protein_coding	Atg16l2	intron	ENSMUSG00000047767	ProperStrand	121	1	-9.5520
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr2	101795087	101795187	protein_coding	Ldlrad3	exon	ENSMUSG00000048058	ProperStrand	53	1	-8.8419
chrX	98643209	98643228	protein_coding	Nono	utr3	ENSMUSG00000031311	ProperStrand	102	chr11	5180669	5180685	protein_coding	Znrf3	utr3	ENSMUSG00000041961	NonProperStrand	210	1	-9.7356
chr15	98667517	98667563	protein_coding	Mll2	exon	ENSMUSG00000048154	ProperStrand	170	chr3	88715215	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-5.1874
chrX	38895269	38895288	protein_coding	Gria3	intron	ENSMUSG00000001986	NonProperStrand	6	chr1	145626057	145626113	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-13.5858
chr19	36694569	36694586	lincRNA	1500017E21Rik	exon	ENSMUSG00000087579	ProperStrand	11	chr1	187231059	187231371	protein_coding	Eprs	exon	ENSMUSG00000026615	ProperStrand	149	1	-14.9501
mmu-miR-1949	0	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr12	55797769	55797859	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	7	-18.0281
chr16	38158136	38158226	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	chr5	147646760	147646840	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	12	-22.3745
chr10	72437415	72437431	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr5	108333572	108333640	snoRNA	ENSMUSG00000064453_Snord21	.	ENSMUSG00000064453	ProperStrand	201	3	-13.6194
chr9	14366594	14366610	protein_coding	Amotl1	exon	ENSMUSG00000013076	ProperStrand	72	chr5	111082720	111082737	protein_coding	Ddx51	exon	ENSMUSG00000029504	ProperStrand	54	1	-13.1610
chr10	22990136	22990155	protein_coding	Eya4	intron	ENSMUSG00000010461	NonProperStrand	21	chr11	98764507	98764523	protein_coding	Wipf2	utr3	ENSMUSG00000038013	ProperStrand	30	1	-16.8573
chr2	29036819	29036855	protein_coding	Setx	utr3	ENSMUSG00000043535	ProperStrand	187	chr6	47881629	47881719	protein_coding	Zfp212	utr3	ENSMUSG00000052763	ProperStrand	20	1	-13.2640
chr11	100775317	100775334	protein_coding	Stat3	intron	ENSMUSG00000004040	NonProperStrand	4	chr7	30231517	30231592	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	2	-22.4965
chr2	26767738	26767797	protein_coding-noncoding	Rpl7a	utr5	ENSMUSG00000062647	ProperStrand	53	chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	1	-9.1535
chr2	27308381	27308398	protein_coding	Brd3	exon	ENSMUSG00000026918	ProperStrand	85	chr5	130300432	130300493	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.9331
chr1	66521957	66521973	protein_coding	Unc80	intron	ENSMUSG00000055567	NonProperStrand	212	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-5.2534
chr8	47296180	47296241	protein_coding	Slc25a4	exon	ENSMUSG00000031633	ProperStrand	53	chr11	116938702	116938749	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-6.4043
chr18	20761171	20761261	protein_coding	Dsg2	utr3	ENSMUSG00000044393	ProperStrand	60	chr1	89673606	89673686	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-3.2633
chr7	29137383	29137418	protein_coding	Rps16	exon	ENSMUSG00000037563	ProperStrand	191	chr5	130300451	130300551	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	4	-4.0023
chrX	45610044	45610076	protein_coding	Utp14a	utr5	ENSMUSG00000063785	ProperStrand	22	chr2	26768373	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-7.6004
chr4	140121138	140121154	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	chr7	116664870	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.2683
chr12	102319715	102319734	protein_coding	Smek1	intron	ENSMUSG00000041846	NonProperStrand	6	chr16	23110913	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-14.1985
chr2	104504974	104504990	protein_coding	Cstf3	exon	ENSMUSG00000027176	ProperStrand	19	chr7	117190016	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-5.5364
chr18	73693109	73693186	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr15	34370544	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	20	-3.5555
chr6	92828412	92828429	protein_coding	Gm15737	intron	ENSMUSG00000079462	ProperStrand	11	chr5	121655100	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-7.0917
chr19	28083300	28083326	protein_coding	Rfx3	intron	ENSMUSG00000040929	ProperStrand	92	chr9	120038620	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.2979
chr10	43232247	43232263	protein_coding	Bend3	utr3	ENSMUSG00000038214	NonProperStrand	14	chr4	131865855	131865987	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.3681
chr12	82050838	82050928	protein_coding	Srsf5	exon	ENSMUSG00000021134	ProperStrand	68	chr16	23111690	23111770	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.7080
chrX	43422445	43422535	LINE	L1Md_F	L1	chrXL1Md_F43422378	NonProperStrand	1	chrX	43422677	43422757	LINE	L1Md_F	L1	chrXL1Md_F43422378	ProperStrand	1	1	-inf
chr15	8437794	8437874	LTR	MLT1G1	MaLR	chr15MLT1G18437515	NonProperStrand	1	chr15	8438015	8438105	SINE	RSINE1	B4	chr15RSINE18438018	ProperStrand	1	1	-inf
chr10	128257530	128257546	protein_coding	Ormdl2	utr5	ENSMUSG00000025353	ProperStrand	51	chr10	90581241	90581283	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-5.1219
chr7	112897146	112897477	protein_coding	Tpp1	exon	ENSMUSG00000030894	ProperStrand	3	chr10	23505150	23505218	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-6.9610
chr13	88569462	88569482	LTR	RMER6D	ERVK	chr13RMER6D88569354	ProperStrand	42	chr18	35714175	35714290	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	4	-13.3499
chr13	59578383	59578399	protein_coding	Agtpbp1	utr3	ENSMUSG00000021557	NonProperStrand	5	chr2	32818884	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-10.5887
chr17	94768315	94768333	LINE	L1_Mus3	L1	chr17L1_Mus394764195	ProperStrand	24	chr18	10052131	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	1	-10.6522
chr7	28421172	28421284	protein_coding	Akt2	exon	ENSMUSG00000004056	ProperStrand	100	chr2	25128025	25128088	protein_coding	Anapc2	utr5	ENSMUSG00000026965	ProperStrand	15	1	-15.1211
chr2	119119747	119119847	protein_coding	Vps18	exon	ENSMUSG00000034216	ProperStrand	21	chr5	23358038	23358097	snoRNA	ENSMUSG00000093321_Snord93	.	ENSMUSG00000093321	ProperStrand	218	1	-12.8541
chr14	25310121	25310170	protein_coding	Rps24	intron	ENSMUSG00000025290	ProperStrand	110	chr7	51505856	51505910	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	1	-7.4058
chr4	108011624	108011725	protein_coding	2010305A19Rik	utr3	ENSMUSG00000048351	ProperStrand	8	chr3	123210854	123210891	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.8655
chr4	43505656	43505723	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr5	111816974	111817014	protein_coding	Pitpnb	utr3	ENSMUSG00000050017	ProperStrand	137	1	-1.6893
chr2	113944608	113945691	protein_coding	Aqr	exon	ENSMUSG00000040383	ProperStrand	70	chr16	43886786	43886849	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	3	-17.3405
chr1	30920069	30920088	protein_coding	Phf3	utr5	ENSMUSG00000048874	ProperStrand	102	chr9	40612852	40612908	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	1	-8.4812
chr1	28331780	28331870	LINE	L1Md_F	L1	chr1L1Md_F28331511	NonProperStrand	1	chr1	28331885	28331965	LINE	MusHAL1	L1	chr1MusHAL128331888	NonProperStrand	1	1	-inf
chr10	111546084	111546103	LTR	RMER15-int	ERVL	chr10RMER15-int111545593	ProperStrand	1	chr3	123210930	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-inf
chr7	106997488	106997544	protein_coding	Spcs2	exon	ENSMUSG00000035227	ProperStrand	17	chrX	84483736	84483762	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-10.8042
chr8	77742563	77742580	protein_coding	Rasd2	exon	ENSMUSG00000034472	ProperStrand	18	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.8813
chr6	122678810	122678851	protein_coding	Slc2a3	utr3	ENSMUSG00000003153	ProperStrand	682	chr9	64022896	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-3.3257
chr13	90223838	90223884	protein_coding	Xrcc4	intron	ENSMUSG00000021615	ProperStrand	6	chr5	122017950	122018023	protein_coding	Aldh2	utr3	ENSMUSG00000029455	ProperStrand	108	3	-19.3666
chr4	126116772	126116839	protein_coding	Eif2c1	exon	ENSMUSG00000041530	ProperStrand	30	chr16	23110911	23110962	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0481
chr12	101092692	101092708	protein_coding	2610021K21Rik	intron	ENSMUSG00000021176	NonProperStrand	6	chr16	23111774	23111828	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-6.2752
chr12	60102888	60102904	protein_coding	Sec23a	exon	ENSMUSG00000020986	ProperStrand	16	chr10	96079848	96079909	protein_coding	Btg1	utr5	ENSMUSG00000036478	ProperStrand	21	1	-18.0482
chr17	35299507	35299597	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	chr7	19886593	19886673	tRNA	tRNA86-SeCTCA	.	1305591	ProperStrand	34	1	-5.8871
chr18	35342121	35381732	protein_coding	Ctnna1	exon	ENSMUSG00000037815	ProperStrand	115	chr9	15118547	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	1	-8.0407
chr10	80641631	80641856	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr4	56910496	56910612	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	6	-4.1201
chr1	36257405	36257423	protein_coding	Uggt1	intron	ENSMUSG00000037470	ProperStrand	67	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.5997
chr4	135327523	135329683	protein_coding	Myom3	exon	ENSMUSG00000037139	NonProperStrand	62	chr4	131865866	131865928	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.7173
chr11	78133849	78133920	protein_coding	Spag5	exon	ENSMUSG00000002055	ProperStrand	49	chrX	34622917	34623007	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-6.0294
chr17	66468409	66468426	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	chr7	117190016	117190057	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-0.7013
chr5	90659878	90659894	protein_coding	Ankrd17	exon	ENSMUSG00000055204	ProperStrand	77	chr11	97642952	97643060	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-3.7078
chr6	47748483	47748583	protein_coding	Pdia4	exon	ENSMUSG00000025823	ProperStrand	41	chr5	138606376	138607156	protein_coding	Mcm7	exon	ENSMUSG00000029730	ProperStrand	258	1	-11.1573
chr4	133561728	133561773	protein_coding	Lin28a	utr3	ENSMUSG00000050966	ProperStrand	55	chr7	118219591	118219655	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-4.3357
chr1	183835100	183835190	protein_coding	Enah	utr3	ENSMUSG00000022995	ProperStrand	196	chr7	117190018	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	5	-7.6539
chr4	129332775	129332791	protein_coding	Kpna6	exon	ENSMUSG00000003731	ProperStrand	39	chr4	131908809	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.8599
chr4	131908236	131908387	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	chr12	110887828	110887896	snoRNA	ENSMUSG00000084549_SNORD113	.	ENSMUSG00000084549	ProperStrand	196	15	-16.0270
chr11	116401412	116402403	protein_coding	Ube2o	exon	ENSMUSG00000020802	ProperStrand	134	chr7	116663714	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.2588
chr9	102737399	102774090	protein_coding	Ryk	exon	ENSMUSG00000032547	ProperStrand	25	chr4	131865855	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-5.6335
chr11	99885311	99885327	protein_coding	Krt33b	exon	ENSMUSG00000057723	NonProperStrand	352	chr3	96132450	96132514	snRNA	ENSMUSG00000075978_U1	.	ENSMUSG00000075978	ProperStrand	132	1	-8.1912
chr11	102170032	102170209	protein_coding	Ubtf	exon	ENSMUSG00000020923	ProperStrand	66	chr9	21761811	21761838	protein_coding	2310047B19Rik	utr3	ENSMUSG00000051238	ProperStrand	3	3	-inf
chr11	97642970	97643050	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	chr6	70805488	70805578	snoRNA	ENSMUSG00000065750_SNORA5	.	ENSMUSG00000065750	ProperStrand	165	1	-0.9583
chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	chr4	131865855	131865980	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	5	-4.3784
chr12	33723779	33727224	protein_coding	Cdhr3	exon	ENSMUSG00000035860	NonProperStrand	4	chr5	121655017	121655157	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-9.2889
chr13	9833578	9833617	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr16	32243793	32243830	snoRNA	ENSMUSG00000080440_SNORA79	.	ENSMUSG00000080440	ProperStrand	140	2	-5.7305
chr2	158185530	158185666	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr4	116827802	116827822	snoRNA	ENSMUSG00000064751_SNORD46	.	ENSMUSG00000064751	ProperStrand	132	2	-8.1505
chr16	24984504	24984520	protein_coding	Lpp	utr3	ENSMUSG00000033306	NonProperStrand	189	chr19	8799581	8799642	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-4.5302
chr9	36549378	36572691	protein_coding	Stt3a	exon	ENSMUSG00000032116	ProperStrand	31	chr11	97642952	97643038	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-6.2248
chr14	19101761	19101828	protein_coding	Rpl15	exon	ENSMUSG00000012405	ProperStrand	145	chr11	98764467	98764516	protein_coding	Wipf2	utr3	ENSMUSG00000038013	ProperStrand	30	4	-inf
chr11	3316437	3316527	protein_coding	Rnf185	utr3	ENSMUSG00000020448	ProperStrand	12	chr2	26493365	26493387	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-6.9066
chr18	10052130	10052153	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr7	117166770	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-1.0071
chr9	37038218	37038238	protein_coding	Slc37a2	utr3	ENSMUSG00000032122	NonProperStrand	13	chr5	3693225	3693241	protein_coding	Ankib1	exon	ENSMUSG00000040351	NonProperStrand	98	1	-15.4527
chr4	116826715	116826768	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	chr13	46862888	46862967	snoRNA	ENSMUSG00000064558_SNORA55	.	ENSMUSG00000064558	ProperStrand	187	5	-18.1205
chr7	114553273	114553311	protein_coding	Syt9	intron	ENSMUSG00000062542	ProperStrand	14	chr2	87802622	87802639	protein_coding	Olfr1157	exon	ENSMUSG00000075143	NonProperStrand	49	1	-16.7620
chr3	68839886	68839970	protein_coding	Trim59	utr3	ENSMUSG00000034317	ProperStrand	22	chr1	162966001	162966041	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-9.0996
chr17	46814084	46814100	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr8	77639825	77639874	protein_coding	Mcm5	exon	ENSMUSG00000005410	ProperStrand	199	1	-6.8427
chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	chr1	42755254	42755270	protein_coding	Pou3f3	exon	ENSMUSG00000045515	NonProperStrand	117	1	-9.4234
chr6	86629356	86629400	protein_coding	Snrnp27	intron	ENSMUSG00000001158	ProperStrand	4	chr4	131865940	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-17.5900
chr9	45709054	45709090	protein_coding	Rnf214	intron	ENSMUSG00000042790	ProperStrand	24	chr18	33954816	33954906	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	4	-16.4163
chr2	125331721	125331739	protein_coding	Fbn1	utr5	ENSMUSG00000027204	ProperStrand	38	chr7	52382014	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-7.6230
chr1	161825889	161825907	protein_coding	Tnr	exon	ENSMUSG00000015829	NonProperStrand	13	chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	1	-15.6708
chr4	154951126	154951144	protein_coding	Nadk	utr5	ENSMUSG00000029063	ProperStrand	25	chr4	131908687	131908771	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.6029
chr2	25816988	25817078	protein_coding	Camsap1	intron	ENSMUSG00000026933	ProperStrand	27	chr2	141208702	141208782	protein_coding	Macrod2	intron	ENSMUSG00000068205	NonProperStrand	20	1	-17.0381
chr5	144471936	144471957	protein_coding	Usp42	utr3	ENSMUSG00000051306	ProperStrand	17	chr2	32818827	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	6	-22.3019
chr12	44320975	44321055	Simple_repeat	(TG)n	Simple_repeat	chr12(TG)n44320980	ProperStrand	1	chr12	108973169	108973259	lincRNA	4930465M20Rik	intron	ENSMUSG00000085641	ProperStrand	1	1	-inf
chr19	8985105	8985293	protein_coding	Ganab	exon	ENSMUSG00000071650	ProperStrand	145	chr19	8798771	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-3.1516
chr2	90235285	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	148634701	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	24	-2.6307
chr5	65210079	65210095	protein_coding	Klf3	intron	ENSMUSG00000029178	ProperStrand	56	chr10	75322763	75322836	protein_coding	Mif	intron	ENSMUSG00000033307	ProperStrand	146	1	-11.6677
chr10	80640974	80641908	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr19	8799830	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	13	-7.9287
chr1	38107088	38107166	protein_coding	Eif5b	exon	ENSMUSG00000026083	ProperStrand	118	chr1	162966019	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	3	-6.3704
chr13	40823795	40823812	protein_coding	Tfap2a	exon	ENSMUSG00000021359	ProperStrand	49	chr18	60730711	60730753	protein_coding	Rbm22	exon	ENSMUSG00000024604	ProperStrand	9	1	-17.6037
chr14	49119709	49119726	protein_coding	6720456H20Rik	exon	ENSMUSG00000036339	NonProperStrand	8	chr5	65540014	65540800	protein_coding	Klhl5	exon	ENSMUSG00000054920	ProperStrand	5	1	-18.8889
chr19	46153695	46153731	protein_coding	Nolc1	exon	ENSMUSG00000015176	ProperStrand	53	chr4	116828181	116828232	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	2	-16.7030
chr15	34060955	34060990	protein_coding	Mtdh	exon	ENSMUSG00000022255	ProperStrand	37	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	1	-7.9940
chr2	90235291	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr16	79020569	79020587	protein_coding	Tmprss15	intron	ENSMUSG00000022857	NonProperStrand	1	1	-inf
chr7	31364538	31364554	protein_coding	Wbp7	exon	ENSMUSG00000006307	ProperStrand	180	chr11	113523870	113523887	protein_coding	Cog1	utr3	ENSMUSG00000018661	ProperStrand	51	1	-11.4368
chr4	134026726	134028762	protein_coding	Stmn1	exon	ENSMUSG00000028832	ProperStrand	54	chr15	5068442	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	2	-10.1774
chr7	128023921	128023959	protein_coding	Eef2k	exon	ENSMUSG00000035064	ProperStrand	27	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.1875
chr10	21555501	21555517	lincRNA	Gm6846	intron	ENSMUSG00000085422	ProperStrand	43	chr4	131908299	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.9253
chr10	21555501	21555517	lincRNA	Gm6846	intron	ENSMUSG00000085422	ProperStrand	43	chr9	120842710	120859309	protein_coding	Ctnnb1	utr5	ENSMUSG00000006932	ProperStrand	214	1	-11.4352
chr19	59534008	59534026	protein_coding	Emx2	exon	ENSMUSG00000043969	NonProperStrand	87	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-8.1832
chr8	108652578	108652632	protein_coding	Nfatc3	utr3	ENSMUSG00000031902	ProperStrand	75	chr4	131908236	131908292	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.1121
chr11	118165134	118165192	protein_coding	Timp2	exon	ENSMUSG00000017466	ProperStrand	3	chr14	31826934	31826970	protein_coding	Gnl3	exon	ENSMUSG00000042354	ProperStrand	53	1	-21.3485
chr5	64041075	64041093	protein_coding	3110047P20Rik	utr5	ENSMUSG00000090061	NonProperStrand	6	chr4	116826698	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	2	-18.0472
chr18	46704901	46704991	LINE	L1_Mus3	L1	chr18L1_Mus346704741	NonProperStrand	1	chr14	34781304	34781384	protein_coding	Zfp488	utr3	ENSMUSG00000044519	ProperStrand	54	1	-inf
chr6	124863831	124863931	protein_coding	Ptms	utr3	ENSMUSG00000030122	ProperStrand	21	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-7.9658
chr1	13566482	13566513	protein_coding	Tram1	exon	ENSMUSG00000025935	ProperStrand	28	chr19	29678580	29678596	protein_coding	C030046E11Rik	exon	ENSMUSG00000038658	ProperStrand	104	1	-13.7563
chr2	90235310	90235346	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr13	23622982	23623070	protein_coding	Hist1h4h	utr5	ENSMUSG00000060981	ProperStrand	30	1	-5.8128
chr5	147767013	147767119	protein_coding	Gtf3a	utr3	ENSMUSG00000016503	ProperStrand	11	chr5	129528952	129528969	protein_coding	Ran	utr3	ENSMUSG00000029430	ProperStrand	82	9	-25.7678
chr8	59966137	59966227	protein_coding	Sap30	exon	ENSMUSG00000031609	ProperStrand	16	chr17	35087933	35087965	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-7.8380
chr3	95648921	95648987	protein_coding	Prpf3	exon	ENSMUSG00000015748	ProperStrand	29	chrX	34622930	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	4	-14.5384
chr2	90235315	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	41406795	41406811	protein_coding	Pik3ap1	utr5	ENSMUSG00000025017	ProperStrand	16	1	-7.0757
chr10	127152705	127152721	protein_coding	Myo1a	exon	ENSMUSG00000025401	ProperStrand	93	chr7	52381737	52381758	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-6.7036
chr3	66100724	66100740	protein_coding	Veph1	utr5	ENSMUSG00000027831	NonProperStrand	92	chr2	26494759	26494827	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.3615
chr7	146684406	146684425	protein_coding	Inpp5a	intron	ENSMUSG00000025477	ProperStrand	166	chr4	153381069	153381128	protein_coding	BC046331	utr3	ENSMUSG00000039523	ProperStrand	6	1	-16.0367
chr3	121471622	121471651	protein_coding	Abcd3	exon	ENSMUSG00000028127	ProperStrand	10	chr9	15119673	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-14.3442
chr15	58773214	58773231	protein_coding	Mtss1	utr3	ENSMUSG00000022353	ProperStrand	68	chr16	23110454	23110520	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.2508
chr4	149459310	149459327	LINE	L1ME2z	L1	chr4L1ME2z149458870	ProperStrand	12	chr8	26712160	26712237	protein_coding	Whsc1l1	utr5	ENSMUSG00000054823	ProperStrand	36	2	-inf
chrX	45788962	45788979	protein_coding	Elf4	intron	ENSMUSG00000031103	NonProperStrand	49	chr11	6428108	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.5628
chr8	130960632	130960722	protein_coding	Nrp1	intron	ENSMUSG00000025810	NonProperStrand	5	chr8	130965701	130965781	protein_coding	Nrp1	intron	ENSMUSG00000025810	ProperStrand	10	1	-19.1587
chr10	70509995	70510017	protein_coding	Bicc1	intron	ENSMUSG00000014329	NonProperStrand	13	chr3	19126971	19127071	protein_coding	Pde7a	utr3	ENSMUSG00000069094	ProperStrand	12	1	-20.5400
chr8	91555679	91555698	protein_coding	Sall1	exon	ENSMUSG00000031665	ProperStrand	96	chr7	116663634	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-3.2071
chr9	15119630	15119766	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	chr11	55296194	55296336	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	44	-20.4865
chr2	57900146	57900162	protein_coding	Ermn	utr3	ENSMUSG00000026830	ProperStrand	27	chr9	120039533	120039550	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-4.8289
chr11	97224583	97224602	protein_coding	Socs7	exon	ENSMUSG00000038485	NonProperStrand	3	chr12	17552949	17552983	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-11.3963
chr2	32781373	32781463	protein_coding	Lrsam1	utr3	ENSMUSG00000026792	ProperStrand	80	chr16	23111372	23111452	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.8895
chr18	38515325	38515343	LTR	RLTR26	ERVK	chr18RLTR2638515145	NonProperStrand	1	chr11	106362558	106362638	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-inf
chr17	92440259	92440276	LTR	RLTR10-int	ERVK	chr17RLTR10-int92439655	NonProperStrand	4	chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	1	-15.1493
chrX	70925260	70925312	protein_coding	Slc6a8	exon	ENSMUSG00000019558	ProperStrand	47	chr4	131866241	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-4.1232
chr2	127123424	127123514	protein_coding	Stard7	utr3	ENSMUSG00000027367	ProperStrand	12	chr7	148634707	148634787	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-7.1654
chr18	68038299	68040405	protein_coding	Cep192	exon	ENSMUSG00000024542	NonProperStrand	16	chr8	13416897	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-9.1174
chr10	5990868	6063979	protein_coding	Akap12	exon	ENSMUSG00000038587	ProperStrand	1008	chr16	23110454	23110585	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	14	-3.9283
chr18	65845716	65845742	protein_coding	Zfp532	intron	ENSMUSG00000042439	ProperStrand	24	chrX	93136011	93136027	protein_coding	Las1l	exon	ENSMUSG00000057421	ProperStrand	248	1	-12.3229
chr2	144594286	144594376	protein_coding	Dtd1	utr3	ENSMUSG00000027430	ProperStrand	9	chr4	131866155	131866235	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-7.4218
chr13	85342048	85342064	protein_coding	Ccnh	exon	ENSMUSG00000021548	NonProperStrand	2	chr2	178194847	178194864	protein_coding	Cdh26	exon	ENSMUSG00000039155	NonProperStrand	77	1	-21.0330
chr10	126741367	126742492	protein_coding	Mars	exon	ENSMUSG00000040354	ProperStrand	38	chr17	24857742	24857822	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.0936
chr5	137960197	137960378	protein_coding	Gigyf1	exon	ENSMUSG00000029714	ProperStrand	49	chr10	110918557	110918647	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	3	-9.4034
chr2	179322377	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr2	25915656	25915672	protein_coding	Nacc2	exon	ENSMUSG00000026932	ProperStrand	98	2	-16.0933
chr1	172680885	172680901	protein_coding	Atf6	intron	ENSMUSG00000026663	ProperStrand	35	chr18	73693085	73693108	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-6.5886
chr5	116013466	116013483	protein_coding	Rplp0	utr3	ENSMUSG00000067274	ProperStrand	291	chr11	69481368	69481468	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-0.7815
chr19	47180944	47180971	protein_coding	Pdcd11	exon	ENSMUSG00000025047	ProperStrand	137	chr2	153583844	153587285	protein_coding	Mapre1	exon	ENSMUSG00000027479	ProperStrand	19	2	-23.2197
chr13	99690080	99690096	protein_coding	Tnpo1	intron	ENSMUSG00000009470	ProperStrand	56	chr9	78215677	78215693	protein_coding	Dppa5a	exon	ENSMUSG00000060461	ProperStrand	79	1	-12.8996
chrX	101158056	101158149	protein_coding	Rlim	exon	ENSMUSG00000056537	ProperStrand	38	chr9	120038613	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-6.5557
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr4	137818054	137818072	protein_coding	Kif17	intron	ENSMUSG00000028758	NonProperStrand	15	1	-10.6054
chr6	64088282	64088301	protein_coding	Grid2	intron	ENSMUSG00000071424	NonProperStrand	76	chr19	8963033	8963104	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.8903
chr16	18474808	18474824	protein_coding	Txnrd2	exon	ENSMUSG00000075704	ProperStrand	3	chr14	76247793	76247816	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-10.4338
chr8	108139921	108140060	protein_coding	Fam65a	exon	ENSMUSG00000038604	ProperStrand	19	chr16	23110546	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.5826
chr17	24837876	24837892	protein_coding	Tbl3	exon	ENSMUSG00000040688	ProperStrand	42	chr4	131908356	131908415	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.9630
chr17	43843088	43843104	protein_coding	Cyp39a1	intron	ENSMUSG00000023963	NonProperStrand	81	chr17	88886063	88886124	protein_coding	Foxn2	exon	ENSMUSG00000034998	ProperStrand	7	1	-17.1925
chr8	123196714	123196784	protein_coding	Cox4i1	exon	ENSMUSG00000031818	ProperStrand	31	chr16	23111389	23111479	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.2771
chr1	63161334	63161350	lincRNA	Gm11602	intron	ENSMUSG00000084799	ProperStrand	22	chr8	32239595	32239611	protein_coding	Rnf122	utr3	ENSMUSG00000039328	NonProperStrand	42	1	-16.0700
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	105193817	105193835	protein_coding	Nek11	intron	ENSMUSG00000035032	NonProperStrand	3	1	-10.7414
chr2	29748620	29748966	protein_coding	Odf2	exon	ENSMUSG00000026790	ProperStrand	58	chr9	78327440	78327540	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-6.4013
chr8	73419308	73419398	protein_coding	Rpl18a	utr3	ENSMUSG00000045128	ProperStrand	394	chr11	55296210	55296290	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-2.6425
chr11	59566153	59566230	protein_coding	Mprip	exon	ENSMUSG00000005417	ProperStrand	58	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-6.9919
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr10	94398367	94398384	protein_coding	Plxnc1	intron	ENSMUSG00000074785	NonProperStrand	11	1	-11.1945
chr18	32405206	32405222	protein_coding	Ercc3	exon	ENSMUSG00000024382	ProperStrand	280	chr5	108334195	108334296	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-2.0424
chrX	96150244	96150260	LINE	L1MD2	L1	chrXL1MD296150173	NonProperStrand	5	chr13	20697127	20697143	protein_coding	Elmo1	exon	ENSMUSG00000041112	ProperStrand	11	1	-19.0787
chr7	136800631	136800649	SINE	RSINE1	B4	chr7RSINE1136800606	ProperStrand	216	chr14	121778238	121778254	protein_coding	Stk24	utr5	ENSMUSG00000063410	NonProperStrand	5	1	-15.8811
chr3	103690208	103690225	protein_coding	Ptpn22	exon	ENSMUSG00000027843	ProperStrand	14	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.9988
chr1	162967511	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	chr15	98356788	98356913	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	6	-1.8394
chrX	7767264	7767329	protein_coding	Ebp	exon	ENSMUSG00000031168	ProperStrand	4	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-8.2228
chr8	122123759	122123827	protein_coding	Taf1c	exon	ENSMUSG00000031832	ProperStrand	26	chr1	89325183	89325201	protein_coding	Gigyf2	utr5	ENSMUSG00000048000	ProperStrand	128	1	-13.4844
chr11	101599717	101599807	protein_coding	Dhx8	exon	ENSMUSG00000034931	ProperStrand	48	chr6	71832605	71832685	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	23	-19.8136
chr6	142211245	142214830	protein_coding	Slco1a5	exon	ENSMUSG00000063975	NonProperStrand	38	chr16	23111689	23111753	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.6668
chr1	88104558	88109644	protein_coding	Armc9	exon	ENSMUSG00000062590	ProperStrand	2	chr7	30807705	30807795	protein_coding	Zfp568	exon	ENSMUSG00000074221	ProperStrand	110	1	-inf
chr8	127971441	127971558	protein_coding	Sipa1l2	exon	ENSMUSG00000001995	ProperStrand	37	chr11	107173510	107173531	protein_coding	Pitpnc1	intron	ENSMUSG00000040430	NonProperStrand	14	1	-17.2921
chr4	102853012	102853030	protein_coding	Slc35d1	intron	ENSMUSG00000028521	ProperStrand	33	chr5	8853448	8853524	protein_coding	Abcb1b	exon	ENSMUSG00000028970	ProperStrand	7	1	-18.6093
chr9	120039538	120039628	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	NonProperStrand	24	chr3	68889061	68889141	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	NonProperStrand	26	1	-16.8271
chr2	109516160	109516176	protein_coding	Bdnf	utr5	ENSMUSG00000048482	NonProperStrand	47	chr16	23111384	23111418	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.6112
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr5	138745919	138745944	protein_coding	Stag3	exon	ENSMUSG00000036928	ProperStrand	53	1	-7.1714
chr5	121975281	121975297	protein_coding	Mapkapk5	intron	ENSMUSG00000029454	ProperStrand	22	chr16	23110828	23110867	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.4786
chr11	113032977	113033057	lincRNA	2610035D17Rik	intron	ENSMUSG00000087259	NonProperStrand	38	chr10	12335441	12335531	protein_coding	Utrn	intron	ENSMUSG00000019820	NonProperStrand	12	1	-17.6232
chrX	160377262	160377280	protein_coding	Zrsr2	exon	ENSMUSG00000031370	ProperStrand	57	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.3697
chr7	26462224	26462270	Satellite	ZP3AR	Satellite	chr7ZP3AR26462199	NonProperStrand	1	chr4	131908689	131908793	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-inf
chr8	36028385	36028495	protein_coding	Tnks	exon	ENSMUSG00000031529	ProperStrand	37	chr15	34370545	34370589	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	3	-10.7379
chr2	90235315	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	30273628	30273645	protein_coding	Snx19	utr3	ENSMUSG00000031993	ProperStrand	353	1	-1.4048
chr7	31742015	31742031	antisense	Gm17077	.	ENSMUSG00000090357	ProperStrand	3	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-13.5890
chr4	40945606	40945666	protein_coding	Nfx1	intron	ENSMUSG00000028423	ProperStrand	39	chr18	35716815	35716878	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	5	-13.1236
chr4	122968617	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	chr4	41150095	41150134	snoRNA	ENSMUSG00000089265_SNORD121A	.	ENSMUSG00000089265	ProperStrand	370	1	-2.8411
chr11	119953228	119953318	protein_coding	2410002I01Rik	exon	ENSMUSG00000025377	ProperStrand	9	chr11	97642957	97643037	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-10.0724
chr6	88674981	88674999	protein_coding	Mgll	utr5	ENSMUSG00000033174	ProperStrand	10	chr3	95039931	95039951	protein_coding	Cdc42se1	utr3	ENSMUSG00000046722	ProperStrand	12	1	-21.0058
chr4	26632569	26632659	LTR	MERVK26-int	ERVK	chr4MERVK26-int26632335	NonProperStrand	1	chr4	26632173	26632263	lincRNA	4930548K13Rik	intron	ENSMUSG00000086257	ProperStrand	2	1	-inf
chr4	55540622	55540653	protein_coding	Klf4	utr3	ENSMUSG00000003032	ProperStrand	64	chr3	95980317	95980407	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-6.7294
chr19	6401779	6402487	protein_coding	Rasgrp2	utr5	ENSMUSG00000032946	ProperStrand	6	chr18	35716810	35716885	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-6.6008
chr13	9833550	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr7	67125767	67125830	snoRNA	ENSMUSG00000089375_Snord107	.	ENSMUSG00000089375	ProperStrand	451	1	-1.4226
chr1	162965537	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr15	98356819	98356913	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	7	-2.0713
chr16	16879098	16879418	protein_coding	Top3b	exon	ENSMUSG00000022779	ProperStrand	36	chr7	116664797	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	15	-inf
chr12	105934631	105934692	protein_coding	Dicer1	exon	ENSMUSG00000041415	ProperStrand	61	chr11	69483195	69483228	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-4.2886
chr4	134896472	134896775	protein_coding	Srrm1	exon	ENSMUSG00000028809	ProperStrand	142	chr5	130300460	130300530	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-2.2781
chr4	43505770	43505860	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr8	72655287	72655304	protein_coding	Rfxank	utr3	ENSMUSG00000036120	ProperStrand	6	1	-7.6381
chr8	77635906	77635923	protein_coding	Mcm5	intron	ENSMUSG00000005410	ProperStrand	199	chr16	56035882	56035918	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	1	-6.5607
chr11	106546307	106546393	protein_coding	Pecam1	exon	ENSMUSG00000020717	ProperStrand	56	chr2	143780927	143782504	protein_coding	Rrbp1	exon	ENSMUSG00000027422	ProperStrand	76	2	-21.1868
chr1	74482581	74482604	protein_coding	Usp37	utr3	ENSMUSG00000033364	ProperStrand	47	chr17	35087895	35087941	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	3	-13.1901
chr10	23505167	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	NonProperStrand	45	chr16	23110908	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	NonProperStrand	93	2	-19.1970
chr17	46861595	46861611	protein_coding	Pex6	exon	ENSMUSG00000002763	ProperStrand	292	chr3	68889194	68889214	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-0.8128
chr1	192621903	192621959	protein_coding-noncoding	Rps6kc1	utr3	ENSMUSG00000089872	ProperStrand	2	chr6	122679626	122679726	protein_coding	Slc2a3	utr3	ENSMUSG00000003153	ProperStrand	682	1	-15.9154
chr2	90235297	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	126829606	126829623	antisense	1810008B01Rik	.	ENSMUSG00000089745	ProperStrand	10	1	-8.0457
chr19	60845921	60846997	protein_coding	Eif3a	exon	ENSMUSG00000024991	ProperStrand	287	chr2	130103449	130103500	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-4.9836
chr3	125172859	125172881	protein_coding	Ndst4	intron	ENSMUSG00000027971	NonProperStrand	3	chr19	8799847	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-11.2482
chr17	11723230	11723248	protein_coding	Park2	intron	ENSMUSG00000023826	NonProperStrand	26	chr2	145076805	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-9.4069
chr2	32818955	32818989	protein_coding-noncoding	Rpl12	utr5	ENSMUSG00000038900	ProperStrand	68	chr18	33954816	33954911	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-3.2766
chr9	103267598	103267688	protein_coding	Cdv3	exon	ENSMUSG00000032803	ProperStrand	68	chr3	88624175	88624222	pseudogene	5830417I10Rik	.	ENSMUSG00000078684	ProperStrand	68	6	-19.3746
chr5	23825941	23825957	protein_coding	Kcnh2	exon	ENSMUSG00000038319	ProperStrand	242	chr1	162968441	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-3.4162
chr6	71863033	71865060	protein_coding	Polr1a	exon	ENSMUSG00000049553	ProperStrand	109	chr9	120038580	120038670	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.0198
chr6	126075509	126075526	protein_coding	Ntf3	intron	ENSMUSG00000049107	NonProperStrand	38	chr7	150717368	150717425	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-6.4074
chr11	57940060	57942174	protein_coding	Gemin5	exon	ENSMUSG00000037275	ProperStrand	33	chr9	65127126	65127142	protein_coding	Cilp	exon	ENSMUSG00000042254	ProperStrand	212	1	-11.9887
chr10	77513342	77513663	protein_coding	Dnmt3l	exon	ENSMUSG00000000730	ProperStrand	37	chr10	110918555	110918635	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	3	-10.5247
chr11	118267617	118267638	protein_coding	Cant1	utr3	ENSMUSG00000025575	ProperStrand	22	chr5	132055759	132055778	protein_coding	Auts2	intron	ENSMUSG00000029673	ProperStrand	71	1	-15.0193
chr5	145586099	145586189	protein_coding	Trrap	exon	ENSMUSG00000045482	ProperStrand	399	chr11	69481352	69481432	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-1.0341
chr12	102082279	102082364	protein_coding	9030617O03Rik	intron	ENSMUSG00000021185	ProperStrand	12	chr11	68887042	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-7.3320
chr5	117733250	117733277	protein_coding	Pebp1	utr3	ENSMUSG00000032959	ProperStrand	54	chr19	8800377	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-3.7252
chr19	57193470	57193487	protein_coding	Ablim1	utr5	ENSMUSG00000025085	ProperStrand	15	chr9	56921974	56921991	protein_coding	Sin3a	intron	ENSMUSG00000042557	ProperStrand	108	1	-14.9479
chr5	128076287	128076304	protein_coding	Slc15a4	utr3	ENSMUSG00000029416	ProperStrand	49	chr15	79908961	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-5.8699
chr9	63868722	63868738	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	chr11	106362639	106362660	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-2.8883
chr9	24549587	24549617	protein_coding	Tbx20	intron	ENSMUSG00000031965	NonProperStrand	110	chr11	106874217	106874254	tRNA	tRNA945-ArgCCG	.	486872	ProperStrand	133	2	-16.5002
chr15	98580699	98580762	protein_coding	Arf3	intron	ENSMUSG00000051853	ProperStrand	41	chr18	35716832	35716881	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-9.9704
chr9	57425823	57425942	protein_coding	Scamp2	intron	ENSMUSG00000040188	ProperStrand	12	chr5	130300517	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-5.5517
chr13	21988823	21988844	miRNA	Mir1983	.	ENSMUSG00000088148	ProperStrand	23	chr10	86165656	86165752	protein_coding	Hsp90b1	exon	ENSMUSG00000020048	ProperStrand	396	1	-11.4733
chr8	3803246	3803343	misc_RNA	RNaseP_nuc	.	ENSMUSG00000088025	ProperStrand	328	chr2	130101996	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	2	-3.9831
chr17	37086909	37086989	protein_coding	Ppp1r11	intron	ENSMUSG00000036398	ProperStrand	1	chr8	129468746	129468836	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-inf
chr7	31565906	31565922	protein_coding	Dmkn	utr3	ENSMUSG00000060962	NonProperStrand	25	chr18	35716813	35716829	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.7263
chr1	34870309	34870399	protein_coding	Fam168b	utr3	ENSMUSG00000037503	ProperStrand	23	chr17	24857717	24857797	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-6.8098
chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	chr17	35089179	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	6	-8.0841
chr11	115870244	115870270	protein_coding	Galk1	exon	ENSMUSG00000020766	ProperStrand	24	chr1	37223914	37223932	protein_coding	Vwa3b	intron	ENSMUSG00000026115	NonProperStrand	1	1	-inf
chr11	104987884	104987951	protein_coding-noncoding	Mettl2	utr5	ENSMUSG00000020691	ProperStrand	3	chr11	104990172	104990201	protein_coding	Mettl2	exon	ENSMUSG00000020691	ProperStrand	21	3	-inf
chr7	129147415	129147467	protein_coding	Gga2	exon	ENSMUSG00000030872	ProperStrand	65	chr8	129468746	129468831	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	10	-20.0965
chr14	15572352	15572371	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr4	131865891	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-1.8958
chr11	11701184	11701271	protein_coding	Fignl1	exon	ENSMUSG00000035455	ProperStrand	10	chr4	131908236	131908293	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.5892
chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	chr8	32260370	32260425	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-2.0844
chr15	66660885	66660902	protein_coding	Sla	intron	ENSMUSG00000022372	ProperStrand	9	chr10	23505798	23506605	protein_coding	Rps12	exon	ENSMUSG00000061983	ProperStrand	309	1	-13.9148
chr1	181320404	181320424	protein_coding	Smyd3	intron	ENSMUSG00000055067	NonProperStrand	190	chr5	130300445	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-2.7434
chr11	62416575	62416611	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr1	162968213	162968289	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-2.7062
chrX	78339972	78340005	protein_coding	Tmem47	utr3	ENSMUSG00000025666	ProperStrand	2	chr14	119693352	119693368	protein_coding	Hs6st3	intron	ENSMUSG00000053465	NonProperStrand	134	1	-19.8194
chr17	35291147	35301778	protein_coding	Prrc2a	exon	ENSMUSG00000024393	ProperStrand	315	chr18	35714144	35714290	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-1.7054
chr2	165642722	165642810	protein_coding	Zmynd8	intron	ENSMUSG00000039671	NonProperStrand	23	chr7	119934436	119934486	protein_coding	Tead1	intron	ENSMUSG00000055320	ProperStrand	217	1	-12.6773
chr9	70406680	70406770	protein_coding	Sltm	intron	ENSMUSG00000032212	ProperStrand	13	chr16	23111373	23111453	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-6.6036
chr4	22414139	22414155	protein_coding	Pou3f2	exon	ENSMUSG00000052621	NonProperStrand	90	chr11	117828407	117828443	protein_coding	Socs3	utr3	ENSMUSG00000053113	ProperStrand	137	1	-10.8410
chr5	37667536	37667552	protein_coding	Crmp1	exon	ENSMUSG00000029121	ProperStrand	85	chr9	21646866	21646884	protein_coding	Dock6	intron	ENSMUSG00000032198	ProperStrand	155	1	-10.7085
chr2	162900281	162900381	protein_coding	Mybl2	exon	ENSMUSG00000017861	ProperStrand	230	chr7	148634776	148634836	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-1.6621
chr17	37188216	37188281	protein_coding	Gabbr1	intron	ENSMUSG00000024462	ProperStrand	27	chr18	35716830	35716880	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.5820
chr4	115810258	115810274	protein_coding	1520402A15Rik	exon	ENSMUSG00000028701	ProperStrand	1	chr16	23110844	23110868	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr4	74843493	74843509	LINE	Lx9	L1	chr4Lx974843264	NonProperStrand	30	chr19	8799603	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-8.1537
chr2	151383185	151385234	protein_coding	Fkbp1a	exon	ENSMUSG00000032966	ProperStrand	36	chr8	129468765	129468845	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	2	-8.8746
chr1	38041130	38041146	protein_coding	Txndc9	utr3	ENSMUSG00000058407	NonProperStrand	5	chr3	95980333	95980359	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-12.0043
chr11	62162907	62162976	protein_coding	Ncor1	exon	ENSMUSG00000018501	ProperStrand	132	chr2	158203985	158204075	snoRNA	ENSMUSG00000065840_SNORA71	.	ENSMUSG00000065840	ProperStrand	107	1	-10.5683
chr19	5293205	5293305	protein_coding	Sf3b2	exon	ENSMUSG00000024853	ProperStrand	102	chr1	78451399	78455153	protein_coding	Farsb	exon	ENSMUSG00000026245	ProperStrand	40	1	-13.0653
chr7	52665029	52665045	protein_coding	Kcna7	exon	ENSMUSG00000038201	ProperStrand	10	chr16	23111760	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-12.6132
chr18	41356152	41356184	miRNA	Mir5097	dead	ENSMUSG00000093361	ProperStrand	221	chr7	149069802	149069869	protein_coding	Tollip	utr3	ENSMUSG00000025139	ProperStrand	19	1	-13.0328
chr18	34793689	34793779	protein_coding	Cdc23	exon	ENSMUSG00000024370	ProperStrand	48	chr17	71990923	71991000	snoRNA	ENSMUSG00000092713_CT010429.1	.	ENSMUSG00000092713	ProperStrand	182	1	-11.5370
chr8	87562252	87562387	protein_coding	Tnpo2	utr5	ENSMUSG00000031691	ProperStrand	92	chr15	79913288	79913306	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.8204
chr14	54873415	54873469	protein_coding	Dad1	exon	ENSMUSG00000022174	ProperStrand	11	chr19	8963027	8963081	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.4574
chr10	28056254	28074411	protein_coding	Ptprk	exon	ENSMUSG00000019889	ProperStrand	45	chr16	23111389	23111469	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.6772
chr9	121363417	121363517	protein_coding	Trak1	exon	ENSMUSG00000032536	ProperStrand	152	chr17	13115767	13115783	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	1	-5.6981
chr6	136765534	136765591	protein_coding	Wbp11	exon	ENSMUSG00000030216	ProperStrand	87	chr10	23505152	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-0.7713
chr4	120231469	120234013	protein_coding	Ctps	exon	ENSMUSG00000028633	NonProperStrand	24	chr16	23111708	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	5	-15.2270
chr13	107737212	107737228	protein_coding	Dimt1	utr5	ENSMUSG00000021692	ProperStrand	185	chr10	90432659	90432678	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	1	-8.3652
chr3	69121012	69121028	protein_coding	Ppm1l	utr5	ENSMUSG00000027784	ProperStrand	32	chr9	121487376	121487395	protein_coding	Lyzl4	intron	ENSMUSG00000032530	ProperStrand	4	1	-19.3591
chr13	24567645	24567663	protein_coding	Cmah	utr3	ENSMUSG00000016756	NonProperStrand	53	chr5	111812088	111812105	protein_coding	Pitpnb	exon	ENSMUSG00000050017	ProperStrand	137	1	-11.9061
chr11	118900007	118900024	protein_coding	Cbx8	exon	ENSMUSG00000025578	ProperStrand	95	chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	1	-8.1455
chr5	136387318	136387378	protein_coding	Ywhag	exon	ENSMUSG00000051391	ProperStrand	142	chr5	121655018	121655099	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.2231
chr1	15630549	15630566	protein_coding	Kcnb2	intron	ENSMUSG00000092083	NonProperStrand	10	chr7	116664851	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-9.8555
chr5	54040609	54040720	protein_coding	Rbpj	exon	ENSMUSG00000039191	ProperStrand	96	chr18	35716856	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-4.2516
chr7	5019730	5021071	protein_coding	U2af2	exon	ENSMUSG00000030435	ProperStrand	103	chrX	92221202	92221219	protein_coding	Spin4	exon	ENSMUSG00000071722	NonProperStrand	14	1	-15.2195
chr6	45965480	46120177	protein_coding	Cntnap2	exon	ENSMUSG00000039419	NonProperStrand	283	chr2	130102052	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-2.4858
chr17	27767435	27768185	protein_coding	Rps10	exon	ENSMUSG00000052146	ProperStrand	94	chr14	33005138	33005206	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-3.1661
chr7	52381972	52382012	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	chr3	68889051	68889229	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	17	-5.8981
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	172270204	172270220	protein_coding	2410001C21Rik	exon	ENSMUSG00000027502	NonProperStrand	54	3	-11.1201
chr9	78327457	78327557	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr14	52947829	52947847	protein_coding	Sall2	exon	ENSMUSG00000049532	ProperStrand	15	1	-9.1285
chr8	24352500	24352875	protein_coding	Golga7	utr3	ENSMUSG00000015341	ProperStrand	36	chr4	131865865	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-6.8933
chr2	92274022	92274090	protein_coding	Cry2	exon	ENSMUSG00000068742	ProperStrand	10	chr4	131908809	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-18.9100
chr11	6428038	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr17	24856620	24856741	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	13	-1.9366
chr4	131760778	131760825	protein_coding	Ythdf2	exon	ENSMUSG00000040025	ProperStrand	15	chr6	71832550	71832645	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-8.3916
chr9	15119971	15120034	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	chr17	35384119	35384173	snoRNA	ENSMUSG00000065273_SNORD83	.	ENSMUSG00000065273	ProperStrand	244	1	-4.5126
chr3	100761832	100763127	protein_coding	Ttf2	exon	ENSMUSG00000033222	ProperStrand	50	chr16	23110967	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.0847
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	60370927	60371372	protein_coding	Alkbh5	utr3	ENSMUSG00000042650	ProperStrand	203	2	-4.0222
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr11	54511123	54511139	protein_coding	Rapgef6	utr3	ENSMUSG00000037533	NonProperStrand	8	1	-10.0060
chr2	90235298	90235345	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	57435752	57435769	protein_coding	Fam160b1	utr5	ENSMUSG00000033478	ProperStrand	49	1	-4.8520
chr5	130047992	130049163	protein_coding	Sfswap	exon	ENSMUSG00000029439	ProperStrand	34	chr4	131908749	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.0811
chr4	24555744	24555766	protein_coding	Klhl32	intron	ENSMUSG00000040387	ProperStrand	67	chr19	8798770	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	2	-7.6209
chr7	29171540	29171558	protein_coding	Med29	utr3	ENSMUSG00000003444	NonProperStrand	134	chr7	29136613	29136638	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.1424
chr10	76515836	76515876	protein_coding	Col18a1	utr3	ENSMUSG00000001435	ProperStrand	287	chr14	31827478	31827520	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-3.9131
chr19	55573065	55573742	protein_coding	Vti1a	exon	ENSMUSG00000024983	ProperStrand	14	chr16	23110890	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.2008
chrX	55284849	55284921	protein_coding	Zic3	exon	ENSMUSG00000067860	ProperStrand	21	chr17	24857796	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.2024
chr6	134668496	134668596	protein_coding	Dusp16	exon	ENSMUSG00000030203	ProperStrand	27	chr4	131865907	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.1241
chr14	31827519	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	chr5	111121066	111121150	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-0.8823
chr13	9833577	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr9	58736976	58737026	protein_coding	Neo1	exon	ENSMUSG00000032340	ProperStrand	35	2	-9.7935
chr16	69864288	69864306	LINE	Lx2A1	L1	chr16Lx2A169863625	NonProperStrand	22	chr5	105514110	105523092	protein_coding	Gbp9	exon	ENSMUSG00000029298	ProperStrand	1	1	-inf
chr18	73693110	73693192	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr18	33954814	33954951	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	16	-1.5883
chr3	142351261	142351279	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr5	108924884	108924984	protein_coding	Pcgf3	exon	ENSMUSG00000033623	ProperStrand	17	1	-10.3473
chr13	46782448	46782538	protein_coding	Nup153	exon	ENSMUSG00000021374	ProperStrand	69	chr10	23505172	23505252	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.0487
chr1	74818604	74818620	protein_coding	Wnt6	utr5	ENSMUSG00000033227	NonProperStrand	11	chr19	8799581	8799645	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-10.2114
chr16	85802546	85802564	protein_coding	Adamts1	exon	ENSMUSG00000022893	ProperStrand	102	chr17	36097663	36097764	protein_coding	Abcf1	exon	ENSMUSG00000038762	ProperStrand	206	1	-9.7740
chr5	123622050	123622066	protein_coding	Hpd	exon	ENSMUSG00000029445	ProperStrand	254	chr8	124431086	124431227	protein_coding	Slc7a5	exon	ENSMUSG00000040010	ProperStrand	166	1	-8.3835
chr5	93057622	93057638	protein_coding	Ccdc158	intron	ENSMUSG00000050050	ProperStrand	11	chr7	29136525	29136544	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.5623
chr11	59025942	59025993	protein_coding	Arf1	utr3	ENSMUSG00000048076	ProperStrand	52	chr2	26494750	26494840	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.3667
chr2	91771550	91771586	protein_coding	Mdk	exon	ENSMUSG00000027239	ProperStrand	56	chr19	8798747	8798809	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-4.9343
chr11	51003712	51003736	lincRNA	5133400J02Rik	exon	ENSMUSG00000086646	ProperStrand	10	chr16	23110902	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-5.0079
chr3	14588600	14588618	protein_coding	E2f5	intron	ENSMUSG00000027552	NonProperStrand	17	chr5	108334195	108334258	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-7.3226
chr5	20561531	20561612	protein_coding	Ptpn12	utr5	ENSMUSG00000028771	ProperStrand	24	chr18	33954828	33954918	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-5.2576
chr2	129874126	129874152	protein_coding	Tgm3	utr3	ENSMUSG00000027401	ProperStrand	4	chr10	60692417	60692433	protein_coding	Adamts14	exon	ENSMUSG00000059901	NonProperStrand	127	1	-17.5987
chr4	134483084	134483174	protein_coding	D4Wsu53e	utr3	ENSMUSG00000037266	ProperStrand	15	chr18	35714171	35714251	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-6.1300
chr17	30737070	30737116	protein_coding	Glo1	exon	ENSMUSG00000024026	ProperStrand	75	chr17	6107150	6107166	protein_coding	Tulp4	intron	ENSMUSG00000034377	ProperStrand	164	2	-17.0455
chr16	42875218	42875235	lincRNA	4932412D23Rik	intron	ENSMUSG00000075070	ProperStrand	4	chr4	131908808	131908943	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	1	-12.9209
chr8	128015065	128015164	protein_coding	Sipa1l2	exon	ENSMUSG00000001995	ProperStrand	37	chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	1	-10.1830
chr11	21048975	21049052	protein_coding	Peli1	utr3	ENSMUSG00000020134	ProperStrand	69	chr4	131865919	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.5558
chr14	104188466	104188487	LTR	MER110A	ERV1	chr14MER110A104188332	NonProperStrand	1	chr13	44964972	44965034	protein_coding	Jarid2	intron	ENSMUSG00000038518	ProperStrand	372	1	-inf
chr4	129005967	129011748	protein_coding	Rbbp4	exon	ENSMUSG00000057236	ProperStrand	22	chr3	108357255	108357383	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	2	-10.5769
chr10	62052621	62053376	protein_coding	Ddx21	exon	ENSMUSG00000020075	ProperStrand	137	chr11	69483187	69483277	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.1797
chr9	74988476	74988533	protein_coding	Myo5a	exon	ENSMUSG00000034593	ProperStrand	89	chr11	69481338	69481414	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-2.5059
chr10	80264036	80264097	protein_coding	Sf3a2	exon	ENSMUSG00000020211	ProperStrand	50	chr8	26824953	26824970	protein_coding	Whsc1l1	utr3	ENSMUSG00000054823	ProperStrand	36	1	-14.7090
chr13	99029225	99029345	protein_coding	Utp15	exon	ENSMUSG00000041747	ProperStrand	19	chr16	23111402	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.1411
chr19	46588944	46589204	protein_coding	Trim8	exon	ENSMUSG00000025034	ProperStrand	29	chr7	29136525	29136549	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	6	-19.1489
chr11	113524761	113524851	protein_coding	D11Wsu99e	exon	ENSMUSG00000041629	ProperStrand	28	chr15	34370591	34370671	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-5.0008
chr4	79649768	79649822	pseudogene	Gm11408	.	ENSMUSG00000083076	NonProperStrand	13	chrX	34622936	34622974	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-6.1263
chr4	128164996	128165012	protein_coding	Csmd2	intron	ENSMUSG00000028804	NonProperStrand	34	chr11	62416600	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-6.2833
chr15	34370545	34370603	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	chr13	23399497	23399529	tRNA	tRNA98-ValCAC	.	563258	ProperStrand	17	2	-9.8141
chr13	94957641	94957657	protein_coding	Lhfpl2	intron	ENSMUSG00000045312	ProperStrand	37	chr4	116827119	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-8.0068
chr10	128062280	128062331	protein_coding	Rps26	exon	ENSMUSG00000025362	ProperStrand	67	chr2	130103441	130103502	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-7.8428
chr9	65044376	65044471	snRNA	ENSMUSG00000075763_U5	.	ENSMUSG00000075763	ProperStrand	216	chr16	23110829	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	13	-2.7583
chr9	96254048	96254134	protein_coding	Atp1b3	intron	ENSMUSG00000032412	ProperStrand	20	chr5	108336380	108336470	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	5	-21.9168
chr2	52566971	52566993	protein_coding	Stam2	exon	ENSMUSG00000055371	NonProperStrand	2	chr9	15119310	15119397	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-12.5137
chr2	179238519	179238536	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.5292
chrX	98900758	98900848	Low_complexity	GA-rich	Low_complexity	chrXGA-rich98900774	ProperStrand	2	chr8	98269995	98270075	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-12.9619
chr14	45949538	45949554	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	chr6	117873777	117873854	protein_coding	Hnrnpf	exon	ENSMUSG00000042079	ProperStrand	147	1	-8.1293
chr2	31374194	31374256	protein_coding-noncoding	Ass1	utr5	ENSMUSG00000076441	ProperStrand	1	chr1	177539813	177539870	protein_coding	Fh1	exon	ENSMUSG00000026526	ProperStrand	37	1	-inf
chr2	28323789	28323807	protein_coding	Mrps2	exon	ENSMUSG00000035772	ProperStrand	8	chr7	4946548	4946602	protein_coding	Zfp579	utr5	ENSMUSG00000051550	ProperStrand	13	1	-19.2024
chr7	143781768	143781784	LINE	Lx9	L1	chr7Lx9143781715	ProperStrand	23	chr10	39978379	39978403	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-7.3656
chr8	127317792	127317808	protein_coding	Trim67	utr5	ENSMUSG00000036913	ProperStrand	43	chr17	24857319	24857379	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	1	-10.3240
chr17	33786805	33786849	protein_coding	Hnrnpm	exon	ENSMUSG00000059208	ProperStrand	56	chr7	52381973	52382010	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	2	-11.0417
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	74446729	74446745	protein_coding	Zfp617	intron	ENSMUSG00000066880	NonProperStrand	208	4	-8.1966
chr5	97427757	97427777	protein_coding	Bmp2k	intron	ENSMUSG00000034663	ProperStrand	4	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	NonProperStrand	91	1	-18.0090
chr6	47758243	47758338	protein_coding	Pdia4	exon	ENSMUSG00000025823	ProperStrand	41	chr4	134479844	134479860	protein_coding	D4Wsu53e	exon	ENSMUSG00000037266	NonProperStrand	50	1	-14.4508
chrX	149828130	149828146	protein_coding	Klf8	utr3	ENSMUSG00000041649	NonProperStrand	107	chr15	63607820	63607836	protein_coding	Gsdmc	utr3	ENSMUSG00000079025	NonProperStrand	3	1	-18.6918
chr17	75079497	75079553	protein_coding	Birc6	intron	ENSMUSG00000024073	ProperStrand	110	chr17	35089181	35089257	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-4.3172
chr13	40823795	40823812	protein_coding	Tfap2a	exon	ENSMUSG00000021359	ProperStrand	49	chr16	91729698	91729723	protein_coding	Itsn1	utr5	ENSMUSG00000022957	ProperStrand	172	1	-11.6083
chr13	22127381	22127419	protein_coding	Hist1h2ah	exon	ENSMUSG00000069302	ProperStrand	12	chr16	23110963	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-4.4633
chr13	58503699	58503716	protein_coding	Hnrnpk	intron	ENSMUSG00000021546	NonProperStrand	13	chr16	23110454	23110517	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.3353
chr8	28385801	28385894	protein_coding	Eif4ebp1	utr3	ENSMUSG00000031490	ProperStrand	22	chr9	61265302	61265319	protein_coding	Tle3	utr3	ENSMUSG00000032280	ProperStrand	88	2	-19.0349
chr4	109178950	109178966	protein_coding	4930522H14Rik	intron	ENSMUSG00000060491	ProperStrand	12	chr16	23110827	23110897	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.4686
chr7	52479107	52481088	protein_coding	Tead2	exon	ENSMUSG00000030796	ProperStrand	39	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-8.5911
chr6	39348582	39348651	protein_coding	Mkrn1	utr3	ENSMUSG00000029922	ProperStrand	177	chr18	33954820	33954910	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-3.0737
chr4	132530099	132530117	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	chr7	118219655	118219740	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-1.0844
chr3	105746681	105746745	protein_coding	Atp5f1	exon	ENSMUSG00000000563	ProperStrand	28	chr11	77995189	77995255	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-7.7031
chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	chr5	74489575	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	2	-0.7455
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr7	4745759	4746068	protein_coding	Rpl28	exon	ENSMUSG00000030432	ProperStrand	220	1	-6.0291
chr5	103915779	103918685	protein_coding	Ptpn13	exon	ENSMUSG00000034573	ProperStrand	23	chr7	29205556	29205589	protein_coding	Samd4b	intron	ENSMUSG00000037513	ProperStrand	72	2	-19.7907
chr19	53406810	53406826	protein_coding	Mxi1	intron	ENSMUSG00000025025	ProperStrand	51	chr3	144260297	144260349	protein_coding	Sep15	utr3	ENSMUSG00000037072	ProperStrand	19	1	-15.9702
chr8	90657811	90657902	protein_coding	Tmem188	utr3	ENSMUSG00000036810	ProperStrand	14	chr4	116828272	116828682	protein_coding	Rps8	utr5	ENSMUSG00000047675	ProperStrand	262	3	-inf
chr17	35088924	35089014	processed_transcript	1110038B12Rik	.	ENSMUSG00000092203	ProperStrand	126	chr14	61822436	61822516	protein_coding	Sacs	exon	ENSMUSG00000048279	ProperStrand	65	1	-11.6629
chr4	123059020	123059120	protein_coding	Macf1	exon	ENSMUSG00000028649	ProperStrand	320	chr19	8798507	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-2.1559
chr7	109149271	109149287	protein_coding	Numa1	exon	ENSMUSG00000066306	NonProperStrand	171	chr4	131865855	131865965	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.0324
chr13	23312577	23312595	LINE	L1MB2	L1	chr13L1MB223312569	NonProperStrand	4	chr4	43505732	43505822	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	1	-8.5468
chr7	133702199	133702250	protein_coding	Eif3c	exon	ENSMUSG00000030738	ProperStrand	92	chr14	52829460	52829490	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	3	-16.5048
chr3	88198312	88198356	protein_coding	Pmf1	utr3	ENSMUSG00000028066	ProperStrand	5	chr9	119664282	119664299	protein_coding	Scn11a	exon	ENSMUSG00000034115	ProperStrand	55	1	-18.2239
chr18	10052130	10052153	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr4	139482849	139482865	lincRNA	4933427I22Rik	exon	ENSMUSG00000085928	ProperStrand	62	1	-8.7352
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr13	12535264	12535317	protein_coding	Lgals8	intron	ENSMUSG00000057554	ProperStrand	1	1	-inf
chr8	87634071	87634087	protein_coding	Zfp791	exon	ENSMUSG00000074194	ProperStrand	3	chr17	24857715	24857794	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-8.3442
chr5	31858469	31858559	LTR	RLTR20A1	ERVK	chr5RLTR20A131858243	ProperStrand	1	chr15	89195112	89195678	protein_coding	Ncaph2	exon	ENSMUSG00000008690	ProperStrand	65	1	-inf
chr6	117875090	117875131	protein_coding	Hnrnpf	utr3	ENSMUSG00000042079	ProperStrand	147	chr5	108334223	108334313	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-3.1446
chr8	113656927	113658561	protein_coding	Pdpr	exon	ENSMUSG00000033624	ProperStrand	49	chr19	8800359	8800465	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	11	-inf
chr8	86981858	86981938	protein_coding	Cacna1a	intron	ENSMUSG00000034656	ProperStrand	35	chr1	63225619	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-7.7439
chr2	116793778	116793809	snRNA	ENSMUSG00000065794_U1	.	ENSMUSG00000065794	ProperStrand	5	chr4	131865411	131865501	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-9.0535
chr9	51856825	51856842	protein_coding	Rdx	intron	ENSMUSG00000032050	ProperStrand	60	chr8	73419657	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.1303
chr4	151679037	151679054	protein_coding	Icmt	utr3	ENSMUSG00000039662	ProperStrand	48	chr15	102498188	102501450	protein_coding	Atp5g2	utr5	ENSMUSG00000062683	ProperStrand	32	1	-15.0269
chr2	70927899	70927915	protein_coding	Dcaf17	exon	ENSMUSG00000041966	NonProperStrand	89	chr10	23505150	23505246	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-0.7462
chr8	125627188	125627242	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	chr19	8799829	8799882	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-2.4700
chr9	31228028	31228097	protein_coding	Nfrkb	utr3	ENSMUSG00000042185	ProperStrand	34	chr2	26494710	26494800	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.1609
chr9	121212997	121213015	protein_coding	Trak1	intron	ENSMUSG00000032536	NonProperStrand	19	chr8	32260335	32260424	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-6.9002
chr2	146125208	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	chr1	162968213	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-4.6295
chr6	122678209	122678265	protein_coding	Slc2a3	utr3	ENSMUSG00000003153	NonProperStrand	4	chr11	97642974	97643074	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	NonProperStrand	10	1	-19.3291
chr6	115757992	115758082	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr2	158184130	158184211	snoRNA	ENSMUSG00000064995_SNORA71	.	ENSMUSG00000064995	ProperStrand	430	74	-20.0014
chr5	114053094	114053111	SINE	ID_B1	B4	chr5ID_B1114052954	NonProperStrand	3	chr11	69483136	69483190	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-14.4332
chr7	133613546	133613586	protein_coding	Sh2b1	intron	ENSMUSG00000030733	ProperStrand	17	chr3	123210854	123210933	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-4.3464
chr8	125012046	125012136	protein_coding	Fam38a	exon	ENSMUSG00000014444	ProperStrand	132	chr7	29136570	29136650	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-3.5929
chr16	11144176	11144276	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr10	7940085	7940104	protein_coding	Ust	intron	ENSMUSG00000047712	ProperStrand	20	1	-12.6876
chr5	134725880	134727740	protein_coding	Gtf2i	exon	ENSMUSG00000060261	ProperStrand	41	chr12	60774056	60774107	snoRNA	ENSMUSG00000077603_SNORA3	.	ENSMUSG00000077603	ProperStrand	185	1	-11.8228
chr19	5609826	5609843	protein_coding	Kat5	intron	ENSMUSG00000024926	ProperStrand	20	chr10	90581033	90581123	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	2	-11.2895
chr1	182521365	182524246	protein_coding	Parp1	exon	ENSMUSG00000026496	ProperStrand	227	chr7	116664817	116664921	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-1.3673
chr10	79075856	79075872	protein_coding	C2cd4c	exon	ENSMUSG00000045912	ProperStrand	24	chr7	52381978	52382012	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-8.5501
chr10	126622630	126622673	protein_coding	Arhgef25	exon	ENSMUSG00000019467	ProperStrand	12	chr19	8963026	8963117	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.2811
chr17	46814084	46814100	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr4	155548766	155548822	protein_coding	Agrn	exon	ENSMUSG00000041936	ProperStrand	175	1	-7.0967
chr1	36160731	36160849	protein_coding	Hs6st1	exon	ENSMUSG00000045216	ProperStrand	63	chr1	162967519	162967566	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-5.7826
chr14	98788782	98788799	LINE	Lx	L1	chr14Lx98788723	NonProperStrand	1	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr8	73419657	73419772	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	chr12	92811877	92812014	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	4	-1.2627
chr12	17552949	17553063	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr5	101260408	101260434	snoRNA	ENSMUSG00000077354_SNORA42	.	ENSMUSG00000077354	ProperStrand	22	8	-inf
chr19	5364735	5364825	protein_coding	Banf1	utr3	ENSMUSG00000024844	ProperStrand	34	chr11	69483148	69483228	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.4615
chrX	54319111	54319177	protein_coding	Htatsf1	exon	ENSMUSG00000067873	ProperStrand	48	chr16	23111451	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.5796
chr14	25673634	25673651	DNA	MER63D	AcHobo	chr14MER63D25673510	NonProperStrand	65	chr2	145076805	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-7.5637
chr4	136124553	136124580	protein_coding	Kdm1a	exon	ENSMUSG00000036940	ProperStrand	83	chr17	24857723	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	5	-9.1499
chr1	138178661	138178677	protein_coding	Camsap2	exon	ENSMUSG00000041570	NonProperStrand	116	chr4	131908753	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-1.0565
chr10	43252511	43252601	protein_coding	1700021F05Rik	exon	ENSMUSG00000019797	ProperStrand	7	chr7	116663683	116663763	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-11.0058
chr2	32818165	32818519	protein_coding	Rpl12	exon	ENSMUSG00000038900	ProperStrand	167	chr6	25638699	25638715	protein_coding	Gpr37	exon	ENSMUSG00000039904	ProperStrand	49	1	-11.6681
chr9	22163131	22163173	protein_coding	Anln	exon	ENSMUSG00000036777	ProperStrand	133	chr11	62418045	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-4.0290
chr12	88504704	88504786	protein_coding	Gstz1	utr3	ENSMUSG00000021033	ProperStrand	7	chr1	162968234	162968289	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	3	-inf
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr4	57706987	57707003	protein_coding	Palm2	intron	ENSMUSG00000090053	NonProperStrand	187	1	-6.6649
chr2	25915656	25915672	protein_coding	Nacc2	exon	ENSMUSG00000026932	ProperStrand	98	chr1	153304818	153304866	protein_coding	1190005F20Rik	exon	ENSMUSG00000053286	ProperStrand	5	1	-17.3536
chr12	111891546	111891575	protein_coding	Dync1h1	intron	ENSMUSG00000018707	ProperStrand	648	chr3	32236978	32237109	protein_coding	Zmat3	utr3	ENSMUSG00000027663	ProperStrand	62	3	-19.0242
chr6	120292107	120292154	protein_coding	Ccdc77	intron	ENSMUSG00000030177	ProperStrand	17	chr19	8800087	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	4	-19.4632
chr13	97436498	97436545	protein_coding	Hmgcr	exon	ENSMUSG00000021670	ProperStrand	56	chr7	29136574	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.4821
chr7	125873532	125873564	protein_coding	6330503K22Rik	exon	ENSMUSG00000033904	ProperStrand	25	chr11	55296283	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-7.9293
chr6	56823382	56823457	protein_coding	Fkbp9	exon	ENSMUSG00000029781	ProperStrand	39	chr7	52378398	52378447	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	1	-9.3702
chr9	37859543	37859623	Other	RMER1A	Other	chr9RMER1A37859422	ProperStrand	1	chr9	37859718	37859808	Other	RMER1A	Other	chr9RMER1A37859664	ProperStrand	1	1	-inf
chr4	103394914	103394935	protein_coding	Dab1	intron	ENSMUSG00000028519	ProperStrand	19	chr7	135023608	135023680	protein_coding	Zfp646	exon	ENSMUSG00000049739	ProperStrand	29	1	-17.2367
chr5	141107482	141107536	protein_coding	Ttyh3	exon	ENSMUSG00000036565	ProperStrand	22	chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-7.8456
chr13	51743664	51743708	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	chr8	113362431	113362458	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	1	-3.0036
chr4	108278918	108278934	protein_coding	Orc1	exon	ENSMUSG00000028587	ProperStrand	161	chr7	135124745	135124932	protein_coding	Fus	exon	ENSMUSG00000030795	ProperStrand	162	1	-9.3411
chrX	39447640	39447690	protein_coding	Xiap	exon	ENSMUSG00000025860	ProperStrand	14	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-6.4303
chr17	56016541	56016557	protein_coding	Zfp119a	intron	ENSMUSG00000057835	NonProperStrand	4	chr1	162968463	162968505	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-11.7228
chr9	109988770	109988820	protein_coding	Dhx30	exon	ENSMUSG00000032480	ProperStrand	29	chr4	131866643	131866659	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	1	-10.5722
chr7	52958453	52958469	protein_coding	Car11	exon	ENSMUSG00000003273	NonProperStrand	250	chr7	52382369	52382424	protein_coding	Rpl13a	exon	ENSMUSG00000074129	ProperStrand	269	1	-7.4561
chr6	6141282	6141309	protein_coding	Slc25a13	exon	ENSMUSG00000015112	ProperStrand	78	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-6.4631
chr6	87844135	87845949	protein_coding	Copg	exon	ENSMUSG00000030058	ProperStrand	68	chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	2	-17.3235
chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	chr10	90432659	90432678	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	1	-6.6005
chr1	16093294	16093377	protein_coding	Rpl7	exon	ENSMUSG00000043716	ProperStrand	93	chr11	6428139	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.4233
chr10	56108537	56108627	protein_coding	Gja1	exon	ENSMUSG00000050953	ProperStrand	70	chr5	74489595	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-3.4926
chr2	90235287	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr15	82009258	82014509	protein_coding	Srebf2	exon	ENSMUSG00000022463	ProperStrand	592	2	-1.5407
chr12	109460710	109460726	protein_coding	Ccdc85c	intron	ENSMUSG00000084883	ProperStrand	157	chr18	73693170	73693190	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	2	-6.2350
chr11	78086787	78086944	protein_coding	2610507B11Rik	exon	ENSMUSG00000010277	ProperStrand	246	chr6	71832628	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-2.9563
chr2	34630165	34630239	protein_coding	Hspa5	exon	ENSMUSG00000026864	ProperStrand	181	chr7	118219575	118219612	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-2.1962
chr1	120806994	120807032	protein_coding	Gli2	intron	ENSMUSG00000048402	ProperStrand	148	chr9	15119630	15119726	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.2172
chr15	36538328	36538385	protein_coding	Pabpc1	utr5	ENSMUSG00000022283	ProperStrand	908	chr19	10116351	10116367	protein_coding	Fads3	exon	ENSMUSG00000024664	NonProperStrand	16	1	-10.5604
chr10	11063464	11063480	protein_coding	Epm2a	exon	ENSMUSG00000055493	ProperStrand	28	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-9.2727
chr11	101321800	101321890	protein_coding	Vat1	exon	ENSMUSG00000034993	ProperStrand	69	chr7	117166756	117166836	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	4	-14.4021
chr19	58929372	58929389	protein_coding	Hspa12a	intron	ENSMUSG00000025092	NonProperStrand	17	chr1	162966813	162966837	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-8.7946
chr9	81949795	81949813	protein_coding	Mei4	intron	ENSMUSG00000043289	NonProperStrand	42	chr12	106269406	106269496	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-4.8231
chr2	162909040	162909056	protein_coding	Mybl2	utr3	ENSMUSG00000017861	ProperStrand	230	chr7	148641215	148641314	protein_coding	Pnpla2	exon	ENSMUSG00000025509	ProperStrand	13	1	-13.7334
chr16	14191995	14192085	protein_coding	Nde1	utr3	ENSMUSG00000022678	ProperStrand	23	chr9	120038468	120038548	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.8435
chr17	13184991	13185013	protein_coding	Wtap	utr5	ENSMUSG00000060475	ProperStrand	119	chr5	74489597	74489615	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-2.5481
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr19	27408788	27408805	protein_coding	Kcnv2	utr3	ENSMUSG00000047298	ProperStrand	3	1	-11.2562
chr2	119613016	119613032	protein_coding	Rpap1	utr5	ENSMUSG00000034032	ProperStrand	96	chr7	52381762	52381805	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-6.6408
chr5	54040987	54042595	protein_coding	Rbpj	exon	ENSMUSG00000039191	ProperStrand	96	chr11	97642969	97643061	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	4	-6.7901
chr2	140081090	140082721	protein_coding	Sel1l2	exon	ENSMUSG00000074764	NonProperStrand	52	chr1	162965531	162965588	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-6.0234
chrX	71589890	71589907	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr7	150717298	150717424	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	3	-6.7129
chr7	26099937	26099953	protein_coding	Tmem145	intron	ENSMUSG00000043843	ProperStrand	24	chr15	78237232	78237248	protein_coding	Mpst	utr5	ENSMUSG00000071711	ProperStrand	7	1	-inf
chr17	39979944	39979976	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr3	54590143	54590160	protein_coding	Smad9	exon	ENSMUSG00000027796	NonProperStrand	15	1	-10.0286
chr1	66521957	66521973	protein_coding	Unc80	intron	ENSMUSG00000055567	NonProperStrand	212	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-4.7325
chr13	6588100	6588162	protein_coding-noncoding	Pfkp	utr3	ENSMUSG00000021196	ProperStrand	20	chr19	8963032	8963048	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-12.3830
chr14	31998528	31998579	protein_coding	Nisch	exon	ENSMUSG00000021910	ProperStrand	125	chr14	33153227	33153832	protein_coding	Ogdhl	exon	ENSMUSG00000021913	ProperStrand	182	1	-9.6145
chr1	137271110	137271126	protein_coding	Shisa4	exon	ENSMUSG00000041889	ProperStrand	64	chr7	117190016	117190055	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.2151
chr4	131493338	131493373	protein_coding	Epb4.1	exon	ENSMUSG00000028906	ProperStrand	23	chr5	101193927	101193947	protein_coding	Helq	intron	ENSMUSG00000035266	NonProperStrand	5	1	-19.1681
chr10	90633689	90633707	protein_coding	Tmpo	intron	ENSMUSG00000019961	NonProperStrand	5	chr5	64301317	64301372	protein_coding	Rell1	utr3	ENSMUSG00000047881	ProperStrand	24	1	-18.9154
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr9	79915104	79915120	protein_coding	Senp6	utr5	ENSMUSG00000034252	ProperStrand	110	1	-7.3839
chr15	78504284	78504301	protein_coding	Elfn2	exon	ENSMUSG00000043460	NonProperStrand	20	chr11	62416600	62416654	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-7.3487
chr8	112387973	112387989	antisense	Gm17344	.	ENSMUSG00000078143	NonProperStrand	100	chr2	26494776	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-3.9667
chr1	187936849	187936882	protein_coding	Lyplal1	intron	ENSMUSG00000039246	ProperStrand	10	chr16	23110905	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-5.0079
chr5	77388448	77390154	protein_coding	Paics	exon	ENSMUSG00000029247	ProperStrand	78	chr8	73419706	73419786	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.6659
chr13	97967507	97967575	protein_coding	Hexb	intron	ENSMUSG00000021665	ProperStrand	22	chr16	18283302	18283319	protein_coding	Dgcr8	exon	ENSMUSG00000022718	ProperStrand	67	1	-15.1132
chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	chr10	18206311	18206331	protein_coding	Nhsl1	intron	ENSMUSG00000039835	NonProperStrand	12	1	-12.7273
chr9	45198928	45199653	protein_coding	Fxyd6	exon	ENSMUSG00000066705	NonProperStrand	108	chr8	13876096	13876175	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-5.9822
chr19	53699464	53699552	protein_coding	Smc3	exon	ENSMUSG00000024974	ProperStrand	61	chr4	53873626	53873644	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	1	-9.0119
chr13	94209549	94262155	protein_coding	Jmy	intron	ENSMUSG00000021690	ProperStrand	16	chr16	23110829	23110892	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-7.9620
chr16	18247469	18248678	protein_coding	Ranbp1	exon	ENSMUSG00000005732	ProperStrand	22	chr15	34370545	34370618	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-5.4759
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	13516142	13516207	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	3	-2.4668
chr2	164521970	164521987	SINE	B4A	B4	chr2B4A164521909	ProperStrand	41	chr18	60981384	60982474	protein_coding	Tcof1	utr3	ENSMUSG00000024613	ProperStrand	68	1	-13.8329
chr1	63225274	63225322	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	chr19	8799829	8799888	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	4	-4.9666
chr16	96832014	96832031	protein_coding	Dscam	exon	ENSMUSG00000050272	ProperStrand	14	chr19	8963085	8963183	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-11.9854
chr3	136526736	136526753	protein_coding	Ppp3ca	intron	ENSMUSG00000028161	NonProperStrand	120	chr12	17552964	17552997	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-3.7709
chr1	88423325	88423411	protein_coding	Ptma	utr5	ENSMUSG00000026238	ProperStrand	385	chrX	70977872	70977962	protein_coding	Abcd1	intron	ENSMUSG00000031378	ProperStrand	12	1	-12.8726
chr9	21617967	21618996	protein_coding	Dock6	exon	ENSMUSG00000032198	ProperStrand	155	chr18	40463853	40463870	protein_coding	Kctd16	intron	ENSMUSG00000051401	ProperStrand	13	1	-14.5278
chr5	89194093	89194109	protein_coding	Dck	utr5	ENSMUSG00000029366	ProperStrand	12	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-6.4045
chr10	39390643	39390662	lincRNA	E130307A14Rik	intron	ENSMUSG00000087177	ProperStrand	14	chr18	35714190	35714290	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-6.2700
chr4	115826756	115826797	protein_coding	Pomgnt1	exon	ENSMUSG00000028700	ProperStrand	6	chr10	90581072	90581162	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-9.4975
chr16	20689344	20692348	protein_coding	Eif4g1	exon	ENSMUSG00000045983	ProperStrand	199	chr7	148634719	148634799	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-1.8853
chr19	10868715	10869093	protein_coding	Cd6	exon	ENSMUSG00000024670	ProperStrand	4	chr1	162965562	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-19.6785
chr3	113827103	113827119	protein_coding	Col11a1	utr3	ENSMUSG00000027966	NonProperStrand	139	chr17	35089181	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-3.8774
mmu-miR-6240	1	26	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr5	125316615	125316632	protein_coding	Ccdc92	exon	ENSMUSG00000037979	ProperStrand	45	1	-6.4720
chr11	6428065	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr1	162967116	162967178	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	4	-1.4836
chr13	6595189	6595226	protein_coding-noncoding	Pfkp	utr3	ENSMUSG00000021196	ProperStrand	20	chr7	116663718	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.5385
chr14	12386211	12386255	protein_coding	Ptprg	utr5	ENSMUSG00000021745	ProperStrand	72	chr17	23957830	23957930	protein_coding	Srrm2	utr3	ENSMUSG00000039218	ProperStrand	521	1	-8.6216
chr4	103003979	103026201	protein_coding	Oma1	exon	ENSMUSG00000035069	ProperStrand	19	chr1	72290931	72290973	snRNA	ENSMUSG00000093111_AC120136.1	.	ENSMUSG00000093111	ProperStrand	137	5	-21.0197
chr4	135846171	135846187	protein_coding	Zfp46	exon	ENSMUSG00000051351	NonProperStrand	85	chr5	108336363	108336460	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-7.0469
chr7	152123993	152125402	protein_coding	Ccnd1	exon	ENSMUSG00000070348	ProperStrand	93	chr16	23111770	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.2531
chr9	108283793	108283883	protein_coding	Usp4	exon	ENSMUSG00000032612	ProperStrand	29	chr6	71832550	71832604	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-7.0530
chr8	64017614	64028377	protein_coding	Palld	exon	ENSMUSG00000058056	NonProperStrand	125	chr10	23505152	23505265	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-1.6803
chr5	122580412	122584741	protein_coding	Ccdc63	utr5	ENSMUSG00000043036	ProperStrand	120	chr18	67944619	67944643	protein_coding	Seh1l	exon	ENSMUSG00000079614	ProperStrand	19	1	-14.2597
chr14	121376134	121376152	LINE	L1MB2	L1	chr14L1MB2121376016	ProperStrand	1	chrX	96245892	96245908	protein_coding	Stard8	intron	ENSMUSG00000031216	ProperStrand	142	1	-inf
chr9	42918894	42918939	protein_coding	Tmem136	utr3	ENSMUSG00000048503	ProperStrand	5	chr7	117166806	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	3	-19.2137
chr19	45839996	45857372	protein_coding	Mgea5	exon	ENSMUSG00000025220	ProperStrand	53	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-5.1531
chr4	130491910	130491957	protein_coding	Laptm5	utr3	ENSMUSG00000028581	ProperStrand	34	chr7	116663634	116663724	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-8.8273
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr2	118872924	118872940	protein_coding	Casc5	utr5	ENSMUSG00000027326	ProperStrand	30	1	-12.7729
chr4	62301821	62353651	protein_coding	Rgs3	exon	ENSMUSG00000059810	ProperStrand	40	chr14	76247711	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	3	-11.7285
chr10	90581034	90581106	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	chr1	87983892	87983952	snoRNA	ENSMUSG00000077274_SNORA26	.	ENSMUSG00000077274	ProperStrand	361	1	-1.6363
chr1	167801007	167801028	protein_coding	Pou2f1	utr3	ENSMUSG00000026565	ProperStrand	34	chr17	35299507	35299534	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-5.8871
chr12	75041590	75041621	protein_coding	Hif1a	exon	ENSMUSG00000021109	ProperStrand	20	chr18	35716764	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	5	-17.4638
chr11	4793504	4793535	protein_coding	Nipsnap1	utr3	ENSMUSG00000034285	ProperStrand	15	chr12	82317769	82317785	protein_coding	Slc8a3	exon	ENSMUSG00000079055	ProperStrand	126	1	-14.6439
chr17	43153905	43154005	protein_coding	Tnfrsf21	utr5	ENSMUSG00000023915	ProperStrand	36	chr16	23111453	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.0295
chr7	130142257	130142347	protein_coding	Rbbp6	exon	ENSMUSG00000030779	ProperStrand	46	chr18	35716794	35716874	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.6197
chr15	100823971	100824031	protein_coding	Scn8a	intron	ENSMUSG00000023033	ProperStrand	14	chr11	97642949	97643049	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-5.1980
chr1	167828267	167828284	protein_coding	Pou2f1	intron	ENSMUSG00000026565	NonProperStrand	33	chr8	72414197	72414257	protein_coding	Yjefn3	intron	ENSMUSG00000048967	NonProperStrand	1	1	-inf
chr6	83757052	83757891	protein_coding	Paip2b	utr3	ENSMUSG00000045896	ProperStrand	19	chr16	23110880	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-3.1937
chr7	52027280	52027309	protein_coding	Vrk3	intron	ENSMUSG00000002205	ProperStrand	22	chr6	115758011	115758100	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-7.4682
chr11	53080529	53086376	protein_coding	Hspa4	exon	ENSMUSG00000020361	ProperStrand	69	chr10	23505154	23505234	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-6.5038
chrX	99478534	99478551	lincRNA	Gm14858	intron	ENSMUSG00000085568	NonProperStrand	4	chr17	30831970	30832028	protein_coding	Dnahc8	intron	ENSMUSG00000033826	ProperStrand	246	4	-inf
chr14	31984170	31984228	protein_coding	Nisch	utr3	ENSMUSG00000021910	ProperStrand	125	chr2	121949510	121949526	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	1	-8.8276
chr5	35435708	35440336	protein_coding	Lrpap1	exon	ENSMUSG00000029103	ProperStrand	43	chr19	8963051	8963173	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-7.3795
chr19	41992919	41992954	protein_coding	Pgam1	utr3	ENSMUSG00000011752	ProperStrand	124	chr14	66342756	66342772	protein_coding	Scara5	intron	ENSMUSG00000022032	ProperStrand	30	1	-13.2601
chr5	123009754	123009773	protein_coding	Ift81	exon	ENSMUSG00000029469	ProperStrand	14	chr4	131908810	131908874	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.6665
chr5	128187821	128187880	protein_coding	Glt1d1	utr3	ENSMUSG00000049971	ProperStrand	13	chr5	121655050	121655111	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	3	-15.6012
chr1	36856130	36858681	protein_coding	Tmem131	exon	ENSMUSG00000026116	ProperStrand	129	chr11	97642952	97642973	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.2788
chrX	35049298	35049388	LINE	L1Md_Gf	L1	chrXL1Md_Gf35048259	ProperStrand	1	chr1	12658104	12658184	lincRNA	Gm17644	exon	ENSMUSG00000066918	NonProperStrand	37	1	-inf
chr2	153171804	153171885	protein_coding	Asxl1	utr5	ENSMUSG00000042548	ProperStrand	76	chr7	117190021	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.9073
chr12	110892838	110892905	snoRNA	ENSMUSG00000064621_AF357355	.	ENSMUSG00000064621	ProperStrand	60	chr7	116664815	116664905	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-4.4881
chr6	112689098	112689322	protein_coding	Srgap3	exon	ENSMUSG00000030257	NonProperStrand	208	chr11	43520276	43520346	protein_coding	Pwwp2a	utr3	ENSMUSG00000044950	ProperStrand	22	1	-12.8531
chr10	62802344	62802360	protein_coding	Sirt1	intron	ENSMUSG00000020063	NonProperStrand	116	chr18	35716831	35716874	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-2.2782
chr9	40611853	40611973	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr4	21797544	21798592	protein_coding	Sfrs18	exon	ENSMUSG00000028248	NonProperStrand	26	2	-15.5541
chr6	6088146	6088163	protein_coding	Slc25a13	intron	ENSMUSG00000015112	ProperStrand	78	chr1	90598741	90598757	protein_coding	Arl4c	utr5	ENSMUSG00000049866	ProperStrand	25	1	-14.5551
chr18	33956940	33957040	protein_coding	Epb4.1l4a	utr3	ENSMUSG00000024376	ProperStrand	16	chr11	62417005	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-8.6998
chr11	11479409	11479499	LTR	RMER6C	ERVK	chr11RMER6C11479298	ProperStrand	1	chr11	11479885	11479965	Other	RMER1B	Other	chr11RMER1B11479575	NonProperStrand	1	1	-inf
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr2	33013309	33013325	protein_coding	Ralgps1	exon	ENSMUSG00000038831	NonProperStrand	24	1	-9.6418
chr19	30177514	30177533	protein_coding	Gldc	exon	ENSMUSG00000024827	ProperStrand	175	chr8	109535456	109535510	protein_coding	Sntb2	utr3	ENSMUSG00000041308	ProperStrand	41	1	-11.9341
chr5	31099546	31099594	protein_coding	Dpysl5	utr3	ENSMUSG00000029168	ProperStrand	27	chrX	97295062	97295079	protein_coding	Eda	intron	ENSMUSG00000059327	NonProperStrand	5	1	-19.7151
chr15	5167535	5167613	protein_coding	Ttc33	utr3	ENSMUSG00000022151	ProperStrand	2	chr1	40042066	40042096	protein_coding	Map4k4	exon	ENSMUSG00000026074	ProperStrand	348	1	-17.1994
chr9	44445864	44445922	protein_coding	Ddx6	utr3	ENSMUSG00000032097	ProperStrand	59	chr16	23111374	23111464	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.2821
chr6	83111671	83111687	protein_coding	1700003E16Rik	exon	ENSMUSG00000030030	ProperStrand	352	chr2	158204037	158204093	snoRNA	ENSMUSG00000065840_SNORA71	.	ENSMUSG00000065840	ProperStrand	107	1	-8.6099
chr4	132978167	132978222	protein_coding	Slc9a1	exon	ENSMUSG00000028854	ProperStrand	28	chr6	86731276	86731292	protein_coding	Anxa4	intron	ENSMUSG00000029994	ProperStrand	47	1	-15.3600
chr9	15069885	15069901	protein_coding	Med17	exon	ENSMUSG00000031935	ProperStrand	135	chr11	5640924	5640940	protein_coding	Urgcp	intron	ENSMUSG00000049680	ProperStrand	3	1	-18.2823
chr14	55683572	55683588	antisense	RP23-171A13.8	.	ENSMUSG00000093452	ProperStrand	3	chr5	108336362	108336408	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-11.1796
chr4	122968633	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	chr2	91436228	91436335	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	2	-2.1951
chr6	115812741	115812760	protein_coding	Ift122	exon	ENSMUSG00000030323	NonProperStrand	3	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-15.3235
chr11	8348767	8350079	protein_coding	Tns3	exon	ENSMUSG00000020422	ProperStrand	81	chr16	23110964	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-0.8511
chr2	26493366	26493473	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr4	56910496	56910628	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	18	-6.2680
chr4	123115731	123115776	protein_coding	Macf1	exon	ENSMUSG00000028649	ProperStrand	320	chr5	34234244	34234262	protein_coding	Whsc1	utr5	ENSMUSG00000057406	ProperStrand	409	1	-6.1437
chr13	114113333	114113350	protein_coding	BC067074	exon	ENSMUSG00000021763	NonProperStrand	62	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-7.6741
chr2	143767990	143768028	protein_coding	Dstn	utr3	ENSMUSG00000015932	ProperStrand	22	chr4	131908236	131908283	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.0772
chr1	72290935	72290973	snRNA	ENSMUSG00000093111_AC120136.1	.	ENSMUSG00000093111	ProperStrand	137	chr3	153574607	153574654	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	4	-21.3664
chr17	87833095	87833113	protein_coding	Calm2	utr3	ENSMUSG00000036438	NonProperStrand	6	chr4	131865856	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	6	-inf
chr9	72566184	72582886	protein_coding	Nedd4	exon	ENSMUSG00000032216	ProperStrand	308	chr8	129468746	129468875	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	4	-6.3265
chr7	4633599	4635879	protein_coding	Hspbp1	exon	ENSMUSG00000063802	ProperStrand	12	chr3	123210853	123210940	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.0354
chr1	34489983	34490001	miRNA	Mir5103	.	ENSMUSG00000092852	NonProperStrand	24	chr12	17552950	17553032	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-6.9013
chr10	80291655	80291745	protein_coding	Oaz1	exon	ENSMUSG00000035242	ProperStrand	49	chr16	23111374	23111454	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.5489
chr2	90235315	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr12	101025436	101025453	protein_coding	2610021K21Rik	intron	ENSMUSG00000021176	ProperStrand	12	1	-7.6663
chr15	103022990	103023049	protein_coding	Cbx5	utr3	ENSMUSG00000009575	ProperStrand	98	chr10	127980942	127981042	protein_coding	Zc3h10	utr3	ENSMUSG00000039810	ProperStrand	9	1	-16.1855
chr4	43505797	43505930	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr5	34993114	34994984	protein_coding	Nop14	exon	ENSMUSG00000036693	ProperStrand	35	2	-6.8467
chr12	12360898	12360914	protein_coding	Fam49a	intron	ENSMUSG00000020589	ProperStrand	7	chr3	123210865	123210910	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-6.1463
chr2	56968378	56968396	protein_coding	Nr4a2	intron	ENSMUSG00000026826	ProperStrand	24	chr10	62341150	62341230	protein_coding	Tet1	exon	ENSMUSG00000047146	ProperStrand	286	1	-12.0382
chrX	160731374	160731394	protein_coding	Pir	intron	ENSMUSG00000031379	ProperStrand	2	chr3	104442644	104442665	protein_coding	Slc16a1	utr5	ENSMUSG00000032902	ProperStrand	48	1	-21.5483
chr8	109127415	109193531	protein_coding	Cdh1	exon	ENSMUSG00000000303	ProperStrand	283	chr7	116663634	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	10	-10.8570
chr17	41074091	41074148	protein_coding	Mut	exon	ENSMUSG00000023921	ProperStrand	20	chr1	90123798	90124639	protein_coding	Heatr7b1	utr5	ENSMUSG00000079429	ProperStrand	147	1	-13.7437
chr15	77597977	77597993	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr11	106362304	106362328	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-1.7555
chr9	48443891	48443911	LTR	RLTR26	ERVK	chr9RLTR2648443761	ProperStrand	1	chr4	122968584	122968658	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-inf
chr15	72955639	72955739	protein_coding	Eif2c2	exon	ENSMUSG00000036698	ProperStrand	154	chr7	116663736	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.0743
chrX	90659795	90659838	protein_coding	Pola1	intron	ENSMUSG00000006678	ProperStrand	83	chr7	117190007	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.7523
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr3	58326396	58326424	protein_coding	Serp1	utr3	ENSMUSG00000027808	ProperStrand	4	1	-13.6452
chr14	19102857	19102935	protein_coding	Rpl15	exon	ENSMUSG00000012405	ProperStrand	145	chr7	120047955	120047984	protein_coding	Tead1	utr3	ENSMUSG00000055593	ProperStrand	15	1	-14.3627
chr15	81453908	81454997	protein_coding	Ep300	exon	ENSMUSG00000055024	ProperStrand	118	chr16	23111374	23111454	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-1.0707
chr9	40612894	40612920	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	chr2	130103435	130103502	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-4.3788
chr15	89184420	89184595	protein_coding	Lmf2	exon	ENSMUSG00000022614	ProperStrand	19	chr10	23505152	23505214	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.1073
chr7	116663446	116663493	protein_coding	Rpl27a	exon	ENSMUSG00000046364	ProperStrand	149	chr7	146086158	146086176	protein_coding	Bnip3	exon	ENSMUSG00000078566	ProperStrand	20	1	-13.7147
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr5	121655027	121655154	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	3	-1.4327
chr2	167836657	167836685	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-6.9888
chr10	77428073	77428091	protein_coding	Trpm2	intron	ENSMUSG00000009292	ProperStrand	4	chr16	11144116	11144231	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	1	-16.1302
chr13	95856366	95856384	protein_coding	Pde8b	intron	ENSMUSG00000021684	ProperStrand	43	chr2	155970276	155970302	protein_coding	Romo1	exon	ENSMUSG00000067847	ProperStrand	3	1	-inf
chr17	15369837	15370940	lincRNA	Gm5091	exon	ENSMUSG00000087655	ProperStrand	5	chr11	6428060	6428160	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-18.9197
chr2	90235314	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	105952177	105953967	protein_coding	Col6a4	exon	ENSMUSG00000032572	ProperStrand	22	1	-6.4314
chr14	56408565	56408585	SINE	B4	B4	chr14B456408441	ProperStrand	1	chr1	95319918	95320355	protein_coding	Hdlbp	exon	ENSMUSG00000034088	ProperStrand	97	1	-inf
chr17	57165304	57166309	protein_coding	Khsrp	exon	ENSMUSG00000007670	ProperStrand	353	chr7	117189864	117189933	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-2.8596
chr2	92227158	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	chr17	35089181	35089237	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	4	-6.6302
chr15	84040918	84041008	protein_coding	Samm50	exon	ENSMUSG00000022437	ProperStrand	51	chr16	23111697	23111777	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.1663
chr1	162966189	162966256	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	chr1	88247769	88247788	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	2	-1.0919
chr14	45949538	45949554	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	chr14	64111563	64111623	protein_coding	Tdh	exon	ENSMUSG00000021953	ProperStrand	67	1	-9.7002
chr3	54526484	54526564	protein_coding	Fam48a	utr3	ENSMUSG00000027751	ProperStrand	16	chr11	62416604	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-7.8033
chr1	155287319	155287356	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	chr5	122689106	122689206	protein_coding	Hvcn1	intron	ENSMUSG00000064267	ProperStrand	182	4	-19.4880
chr16	23110990	23111010	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr12	17552949	17552995	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-1.3369
chr1	162966819	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	chr4	132394370	132394450	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	3	-6.2684
chr6	115757996	115758132	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	9	-4.7164
chr5	138610093	138610173	protein_coding	Mcm7	exon	ENSMUSG00000029730	ProperStrand	258	chrX	7742774	7742791	protein_coding	Tbc1d25	intron	ENSMUSG00000039201	NonProperStrand	2	1	-18.2876
chr8	73419657	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	chr15	79908929	79909022	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	23	-2.7245
chr5	33136392	33136414	protein_coding	C330019G07Rik	exon	ENSMUSG00000054280	ProperStrand	22	chr16	23110909	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-6.3713
chr4	128440049	128440068	protein_coding	A3galt2	intron	ENSMUSG00000028794	ProperStrand	3	chr19	8798484	8798513	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-11.5227
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	1	-7.8145
chr2	84530865	84531297	protein_coding	Zdhhc5	exon	ENSMUSG00000034075	NonProperStrand	144	chr1	162966813	162966865	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-4.5570
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr9	120038522	120038667	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	4	-1.5554
chr8	13173996	13174040	protein_coding	Lamp1	intron	ENSMUSG00000031447	ProperStrand	92	chr10	127564044	127564085	protein_coding	Baz2a	utr3	ENSMUSG00000040054	ProperStrand	274	2	-14.8924
chrX	97767046	97767126	Simple_repeat	(TTG)n	Simple_repeat	chrX(TTG)n97767050	NonProperStrand	1	chr3	41432328	41432418	protein_coding	Sclt1	intron	ENSMUSG00000059834	NonProperStrand	6	1	-inf
chr2	72786627	72786727	protein_coding	Sp3	intron	ENSMUSG00000027109	ProperStrand	11	chr17	35089180	35089251	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-8.9052
chr10	90581033	90581220	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	chr3	123210852	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	55	-2.8212
chr9	58736933	58736954	protein_coding	Neo1	exon	ENSMUSG00000032340	ProperStrand	35	chr19	8798743	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	6	-20.2031
chr19	58283192	58283272	antisense	Gm16277	.	ENSMUSG00000087002	ProperStrand	1	chr19	59411179	59411269	protein_coding	Pdzd8	intron	ENSMUSG00000074746	ProperStrand	42	1	-inf
chr14	124353869	124353886	protein_coding	Itgbl1	exon	ENSMUSG00000032925	ProperStrand	159	chr7	17471207	17471295	protein_coding	Dact3	exon	ENSMUSG00000078794	ProperStrand	6	1	-16.1108
chr9	108110931	108111021	protein_coding	Dag1	exon	ENSMUSG00000039952	ProperStrand	54	chr13	64236455	64236535	protein_coding	Zfp367	utr3	ENSMUSG00000044934	ProperStrand	34	1	-14.6693
chr11	80590646	80590736	protein_coding	Myo1d	intron	ENSMUSG00000035441	ProperStrand	144	chr5	139724870	139724949	protein_coding	Sun1	utr3	ENSMUSG00000036817	ProperStrand	108	1	-10.3755
chr19	44188375	44188455	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr6	131330313	131330403	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	ProperStrand	408	6	-18.7962
chr6	4704514	4704604	protein_coding	Peg10	exon	ENSMUSG00000092035	ProperStrand	102	chr2	130101988	130102068	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	10	-19.0033
chr7	148633867	148633927	protein_coding	Rplp2	exon	ENSMUSG00000025508	ProperStrand	106	chr2	130440577	130440607	protein_coding	Fastkd5	exon	ENSMUSG00000079043	ProperStrand	9	1	-16.0618
chr11	52202581	52202618	protein_coding	Vdac1	utr3	ENSMUSG00000020402	ProperStrand	107	chr19	38136015	38136044	protein_coding	Cep55	intron	ENSMUSG00000024989	ProperStrand	29	1	-13.6266
chrX	20428785	20428862	protein_coding	Araf	exon	ENSMUSG00000001127	ProperStrand	23	chr7	148634736	148634826	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	8	-20.2199
chr17	75938881	75938919	protein_coding	Fam98a	intron	ENSMUSG00000002017	ProperStrand	22	chr4	131826038	131826127	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	3	-21.2281
chr19	43579408	43579425	protein_coding	Got1	intron	ENSMUSG00000025190	NonProperStrand	147	chr12	81441013	81441043	protein_coding	Dcaf5	exon	ENSMUSG00000049106	ProperStrand	23	1	-13.4563
chr15	34370541	34370565	protein_coding-noncoding	Rpl30	utr3	ENSMUSG00000058600	ProperStrand	30	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.4908
chr6	11911402	11911419	protein_coding	Phf14	intron	ENSMUSG00000029629	ProperStrand	26	chr11	6428089	6428169	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.7683
chr15	85692891	85692991	protein_coding	Gtse1	exon	ENSMUSG00000022385	ProperStrand	74	chr18	35716836	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.8323
chr11	32500864	32503675	protein_coding	Stk10	exon	ENSMUSG00000020272	NonProperStrand	73	chr7	29136525	29136544	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.0406
chr11	97023892	97023937	protein_coding	Kpnb1	utr3	ENSMUSG00000001440	ProperStrand	197	chr19	8798525	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-5.1504
chr16	15658158	15658248	protein_coding	Prkdc	intron	ENSMUSG00000022672	NonProperStrand	24	chr6	134096777	134096859	protein_coding	Etv6	intron	ENSMUSG00000030199	NonProperStrand	77	1	-14.6678
chr2	156090046	156092919	protein_coding	Phf20	exon	ENSMUSG00000038116	ProperStrand	60	chr17	36097663	36097764	protein_coding	Abcf1	exon	ENSMUSG00000038762	ProperStrand	206	1	-10.8394
chr2	76471660	76471676	protein_coding	Prkra	exon	ENSMUSG00000002731	NonProperStrand	65	chr10	23505204	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.1260
chr11	44377996	44378076	protein_coding	Rnf145	utr3	ENSMUSG00000019189	ProperStrand	46	chr2	32818850	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-5.9925
chr11	100414998	100415014	protein_coding	Ttc25	exon	ENSMUSG00000006784	NonProperStrand	119	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-6.3812
chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	chr5	134965798	134965827	protein_coding	Clip2	utr3	ENSMUSG00000063146	ProperStrand	35	1	-10.1508
chr12	70455740	70457019	protein_coding	Nemf	exon	ENSMUSG00000020982	ProperStrand	77	chr9	15119714	15119759	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.2068
chr5	115939506	115939566	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr1	88247816	88247876	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	3	-2.2703
chr17	12897799	12928940	protein_coding	Igf2r	exon	ENSMUSG00000023830	ProperStrand	151	chr2	130101995	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	5	-15.0906
chr14	61398407	61398423	protein_coding	C1qtnf9	exon	ENSMUSG00000071347	ProperStrand	187	chr11	106362587	106362635	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	2	-8.4878
chr11	102662460	102662476	protein_coding	Gjc1	exon	ENSMUSG00000034520	NonProperStrand	39	chr6	115758087	115758119	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-6.3206
chr17	35647381	35647481	protein_coding	Pou5f1	exon	ENSMUSG00000024406	ProperStrand	104	chr2	158182156	158182199	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-3.9539
chr19	47357548	47357564	protein_coding	Sh3pxd2a	exon	ENSMUSG00000053617	NonProperStrand	22	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.5019
chr7	66053268	66058847	protein_coding	Atp10a	exon	ENSMUSG00000025324	ProperStrand	37	chr9	120038466	120038551	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.9292
chr2	25292150	25292240	protein_coding	Abca2	exon	ENSMUSG00000026944	ProperStrand	57	chr6	39351407	39354710	protein_coding	Mkrn1	exon	ENSMUSG00000029922	ProperStrand	177	1	-11.2461
chr13	98018197	98018249	protein_coding	Enc1	intron	ENSMUSG00000041773	ProperStrand	24	chr8	129468746	129468797	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-6.2064
chr3	57450646	57450662	protein_coding	Commd2	exon	ENSMUSG00000036513	ProperStrand	23	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-5.4333
chr12	60173950	60173967	protein_coding	Pnn	utr3	ENSMUSG00000020994	ProperStrand	42	chr6	85895881	85895897	protein_coding	Dusp11	utr3	ENSMUSG00000030002	ProperStrand	37	1	-15.0038
chr5	89383967	89457318	protein_coding	Slc4a4	exon	ENSMUSG00000060961	NonProperStrand	195	chr12	17553062	17553083	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-2.8910
chr2	152744195	152744211	protein_coding	Mylk2	intron	ENSMUSG00000027470	ProperStrand	4	chr2	26494708	26494763	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-8.5876
chr1	162966207	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	chr2	166890788	166890830	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	1	-4.7097
chr6	92019406	92019460	protein_coding	Fgd5	exon	ENSMUSG00000034037	ProperStrand	38	chr7	52382236	52382315	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-9.2013
chr7	91300167	91300257	protein_coding	Fam108c	exon	ENSMUSG00000038459	ProperStrand	19	chr11	68886928	68887008	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-6.3948
chrX	98641474	98641513	protein_coding	Nono	exon	ENSMUSG00000031311	ProperStrand	102	chr15	91252735	91252751	protein_coding	Slc2a13	intron	ENSMUSG00000036298	ProperStrand	22	1	-14.2781
chr5	8694154	8694170	protein_coding	Abcb1a	exon	ENSMUSG00000040584	ProperStrand	12	chrX	132805940	132805976	protein_coding	Ngfrap1	exon	ENSMUSG00000046432	ProperStrand	28	1	-17.8760
chr7	88303816	88303864	protein_coding	Slc28a1	intron	ENSMUSG00000025726	ProperStrand	8	chr7	29136575	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-6.2203
chr9	108478138	108478186	protein_coding	Wdr6	exon	ENSMUSG00000066357	ProperStrand	30	chr15	79908929	79908954	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-6.8444
chr8	77633639	77633716	protein_coding	Mcm5	exon	ENSMUSG00000005410	ProperStrand	199	chr19	12086075	12086112	tRNA	tRNA637-ArgTCT	.	135868	ProperStrand	17	2	-19.7020
chr4	137106853	137120830	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	chr16	23110454	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	14	-5.7648
chr14	70953646	70953662	protein_coding	Hr	utr5	ENSMUSG00000022096	ProperStrand	7	chr9	78326601	78326637	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-10.7324
chr2	137621039	137621056	lincRNA	Gm14064	intron	ENSMUSG00000085640	ProperStrand	10	chr5	144944276	144945662	protein_coding	Lmtk2	utr3	ENSMUSG00000038970	ProperStrand	60	1	-16.9842
mmu-miR-690	0	17	miRNA	mmu-miR-690	.	mmu-miR-690	ProperStrand	63	chr8	108475724	108475772	protein_coding	Slc12a4	exon	ENSMUSG00000017765	ProperStrand	25	1	-14.9896
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr19	8799062	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-1.7344
chr1	71675893	71675935	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-2.9083
chr3	52388277	52388294	SINE	B4A	B4	chr3B4A52388218	ProperStrand	169	chr4	131865380	131865493	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-2.1616
chr18	52648236	52648271	protein_coding	Srfbp1	exon	ENSMUSG00000024528	ProperStrand	9	chr2	130101241	130101308	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	2	-16.5972
chr12	53000088	53000175	protein_coding	Heatr5a	exon	ENSMUSG00000035181	ProperStrand	21	chr11	69483136	69483210	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.3745
chr18	82773672	82773688	protein_coding	Zfp236	exon	ENSMUSG00000041258	NonProperStrand	117	chr11	97643007	97643060	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.4159
chr7	150717298	150717425	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	chr8	13876097	13876226	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	2	-1.0810
chr7	73007275	73007294	protein_coding	Pcsk6	exon	ENSMUSG00000030513	NonProperStrand	9	chr11	69483136	69483234	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-6.0733
chr11	120148960	120148976	protein_coding	Bahcc1	exon	ENSMUSG00000039741	NonProperStrand	268	chr5	115939521	115939560	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-4.9236
chr9	120037930	120038055	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	chr11	6520343	6520423	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	9	-8.7590
chr2	120802957	120802974	protein_coding	Tmem62	utr5	ENSMUSG00000054484	ProperStrand	6	chr11	48616641	48616695	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	1	-14.1016
chr4	132953227	132953248	protein_coding	Slc9a1	intron	ENSMUSG00000028854	NonProperStrand	2	chr11	77996558	77996621	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-13.5262
chr15	95050371	95050387	protein_coding	Nell2	utr3	ENSMUSG00000022454	ProperStrand	64	chr17	25991119	25991499	protein_coding	Wdr90	exon	ENSMUSG00000073434	ProperStrand	91	1	-12.3460
chr17	31695214	31695304	lincRNA	4833413E03Rik	exon	ENSMUSG00000013562	NonProperStrand	11	chr2	158182213	158182293	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	10	-19.5119
chr14	99440367	99440416	protein_coding	Mzt1	intron	ENSMUSG00000033186	ProperStrand	6	chr5	89383967	89457318	protein_coding	Slc4a4	exon	ENSMUSG00000060961	NonProperStrand	195	1	-15.7112
chr9	15130913	15131005	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	chr11	106874217	106874253	tRNA	tRNA945-ArgCCG	.	520637	ProperStrand	133	1	-7.6237
chr14	55684499	55684521	protein_coding	Zfhx2	exon	ENSMUSG00000040721	ProperStrand	18	chr9	120039533	120039623	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	4	-17.4489
chr11	60370927	60370943	protein_coding	Alkbh5	utr3	ENSMUSG00000042650	ProperStrand	203	chr2	26494780	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.1578
chr8	3614249	3614265	protein_coding	Xab2	exon	ENSMUSG00000019470	ProperStrand	52	chr5	130300419	130300476	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.7577
chr16	91227869	91227885	protein_coding	Olig2	utr3	ENSMUSG00000039830	ProperStrand	3	chr11	106362567	106362638	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-13.7636
chr15	77597977	77597993	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr9	58066482	58066525	protein_coding	Pml	utr3	ENSMUSG00000036986	ProperStrand	45	1	-9.3860
chr1	112213323	112213403	LINE	L1Md_F2	L1	chr1L1Md_F2112213132	ProperStrand	1	chr5	45401520	45401610	LINE	L1Md_F2	L1	chr5L1Md_F245401408	ProperStrand	3	1	-inf
chr5	130336089	130338534	protein_coding	Sumf2	exon	ENSMUSG00000025538	ProperStrand	20	chr6	120467088	120468467	protein_coding	Cecr5	exon	ENSMUSG00000058979	ProperStrand	97	1	-14.5874
chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	chr5	151755616	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	3	-9.3169
chr16	30514154	30514171	protein_coding	Tmem44	utr3	ENSMUSG00000022537	ProperStrand	217	chr17	78664922	78664941	protein_coding	Crim1	intron	ENSMUSG00000024074	NonProperStrand	5	1	-15.9014
chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	chr13	90238585	90238646	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	1	-2.5707
chr7	20323622	20323722	protein_coding	Pvrl2	exon	ENSMUSG00000062300	ProperStrand	110	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.4137
chr2	90235285	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	4829164	4829180	protein_coding	Sephs1	utr3	ENSMUSG00000026662	NonProperStrand	271	4	-7.0013
chr12	74018725	74018774	protein_coding	4930447C04Rik	utr5	ENSMUSG00000021098	ProperStrand	8	chr9	103401280	103401296	protein_coding	Tmem108	exon	ENSMUSG00000042757	NonProperStrand	323	1	-14.0824
chr9	54768318	54768334	protein_coding	Agphd1	exon	ENSMUSG00000035878	NonProperStrand	19	chr7	86840116	86840165	protein_coding	5730590G19Rik	exon	ENSMUSG00000046591	ProperStrand	45	1	-16.2442
chr15	98604924	98606960	protein_coding	Wnt10b	exon	ENSMUSG00000022996	NonProperStrand	189	chr9	15119631	15119724	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-0.9057
chr8	116306567	116306584	protein_coding	Adamts18	intron	ENSMUSG00000053399	ProperStrand	3	chr9	15119631	15119766	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-8.7352
chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	chr7	5062343	5062361	protein_coding	Rfpl4	exon	ENSMUSG00000035191	NonProperStrand	27	1	-10.8219
chr19	57685453	57685475	Low_complexity	GC_rich	Low_complexity	chr19GC_rich57685453	ProperStrand	13	chr14	33005063	33005138	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-7.0085
chr15	98763581	98764798	protein_coding	Tuba1b	exon	ENSMUSG00000023004	ProperStrand	32	chr9	120039586	120039676	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-4.4995
mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr14	52829460	52829550	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	2	-2.5611
chr1	138071984	138072044	protein_coding	Kif21b	utr3	ENSMUSG00000041642	ProperStrand	77	chr19	8799027	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-5.3447
chr15	81110991	81111009	SINE	ID4	ID	chr15ID481110956	ProperStrand	272	chr14	55166715	55166775	protein_coding	Haus4	intron	ENSMUSG00000022177	ProperStrand	4	1	-15.9439
chr8	24169015	24169031	protein_coding	Ank1	utr5	ENSMUSG00000031543	ProperStrand	47	chr10	110918554	110918694	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-3.9024
mmu-miR-6240	4	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr18	60936057	60936132	protein_coding	Rps14	exon	ENSMUSG00000024608	ProperStrand	154	1	-4.0869
chr8	113341524	113341605	protein_coding	Sf3b3	exon	ENSMUSG00000033732	ProperStrand	181	chr2	26494712	26494802	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.3134
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr16	5062715	5063040	protein_coding	Ubn1	exon	ENSMUSG00000039473	ProperStrand	35	1	-11.5163
chr11	8388676	8388699	protein_coding	Tns3	intron	ENSMUSG00000020422	ProperStrand	81	chr10	23505150	23505209	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-0.8528
chr14	68318296	68318386	protein_coding	Cdca2	exon	ENSMUSG00000048922	ProperStrand	50	chr9	120038567	120038647	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.3693
chr4	123045222	123217110	protein_coding	Macf1	exon	ENSMUSG00000028649	ProperStrand	320	chr4	131908689	131908890	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	8	-2.0607
chr10	41994756	41994801	protein_coding	Foxo3	exon	ENSMUSG00000048756	ProperStrand	59	chr8	32260335	32260422	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-4.6622
chr9	46663320	46663341	LINE	L2c	L2	chr9L2c46663241	ProperStrand	1	chr1	89681129	89681177	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	NonProperStrand	11	1	-inf
chr5	37497135	37497167	protein_coding	Jakmip1	intron	ENSMUSG00000063646	ProperStrand	21	chr16	23110831	23110890	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.5481
chr5	54389949	54389967	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	3	-4.3166
chr3	20238638	20238656	protein_coding	Agtr1b	intron	ENSMUSG00000054988	NonProperStrand	39	chr1	9932550	9932626	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-8.5931
chr11	87003386	87003444	protein_coding	Trim37	intron	ENSMUSG00000018548	ProperStrand	17	chr2	158182156	158182193	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-7.5108
chr11	83217478	83217568	protein_coding	Ap2b1	utr3	ENSMUSG00000035152	ProperStrand	60	chr5	130295416	130295496	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-5.2484
chr9	15069885	15069901	protein_coding	Med17	exon	ENSMUSG00000031935	ProperStrand	135	chr7	116663667	116663767	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-3.7964
chr11	101321050	101327425	protein_coding	Vat1	utr3	ENSMUSG00000034993	ProperStrand	69	chr16	23110829	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-1.1561
chr10	79373278	79373297	protein_coding	C030046I01Rik	utr3	ENSMUSG00000035781	ProperStrand	14	chr15	98350145	98350266	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-7.6583
chr4	133310089	133310110	protein_coding	Arid1a	intron	ENSMUSG00000007880	ProperStrand	465	chr11	93969858	93969875	protein_coding	Spag9	exon	ENSMUSG00000020859	NonProperStrand	8	1	-13.3477
chr19	38146728	38146812	protein_coding	Cep55	intron	ENSMUSG00000024989	ProperStrand	29	chr11	118269396	118270048	protein_coding	Cant1	exon	ENSMUSG00000025575	ProperStrand	22	1	-16.8197
chr9	103401280	103401296	protein_coding	Tmem108	exon	ENSMUSG00000042757	NonProperStrand	323	chr9	114472999	114473022	protein_coding	Trim71	utr5	ENSMUSG00000079259	ProperStrand	162	1	-7.9544
chr5	77738902	77738918	protein_coding	Noa1	exon	ENSMUSG00000036285	ProperStrand	147	chr18	73750343	73750378	protein_coding	Mex3c	exon	ENSMUSG00000037253	ProperStrand	17	1	-14.0790
chr12	114290175	114290191	protein_coding	Pacs2	intron	ENSMUSG00000021143	NonProperStrand	302	chr18	57514476	57514499	protein_coding	Prrc1	utr5	ENSMUSG00000024594	NonProperStrand	22	1	-12.1071
chr4	43505757	43505847	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr2	120929602	120929619	protein_coding	Tgm7	exon	ENSMUSG00000079103	ProperStrand	1	1	-inf
chr5	36043345	36044504	protein_coding	Sh3tc1	exon	ENSMUSG00000036553	ProperStrand	16	chr10	23505573	23505626	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-10.2251
chr5	34973310	34973390	protein_coding	Add1	utr3	ENSMUSG00000029106	ProperStrand	88	chr11	69483139	69483229	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	5	-9.3175
chr9	15116994	15117014	snoRNA	ENSMUSG00000077614_SNORA40	.	ENSMUSG00000077614	ProperStrand	54	chr11	69483136	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	4	-9.4127
chr18	42683787	42683877	protein_coding	Tcerg1	exon	ENSMUSG00000024498	ProperStrand	210	chr15	98350203	98350283	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-2.4670
chr12	110888247	110888295	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr12	112779214	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-0.8993
chr3	99955054	99955858	protein_coding	Wdr3	exon	ENSMUSG00000033285	ProperStrand	30	chr4	131908729	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	7	-16.9129
chr10	98728920	98729010	protein_coding	Dusp6	utr3	ENSMUSG00000019960	ProperStrand	116	chr8	32260340	32260420	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	4	-11.3702
chr11	53616781	53616798	protein_coding	Gm12216	intron	ENSMUSG00000081769	NonProperStrand	3	chr19	8799582	8799622	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-13.1191
chr7	147312599	147312699	protein_coding	Paox	exon	ENSMUSG00000025464	ProperStrand	2	chr18	35716740	35716806	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-9.2832
chr12	100631013	100631103	protein_coding	Foxn3	intron	ENSMUSG00000033713	ProperStrand	74	chr19	8963096	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.9326
chr15	58287441	58287484	protein_coding	D15Ertd621e	utr3	ENSMUSG00000037119	ProperStrand	26	chr10	23506278	23506314	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-8.6254
chr10	126837190	126881352	protein_coding	R3hdm2	utr5	ENSMUSG00000025404	ProperStrand	33	chr16	23111389	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-3.9154
chr10	40307396	40307412	protein_coding	Slc22a16	exon	ENSMUSG00000019834	NonProperStrand	11	chr12	56591595	56591760	protein_coding	Nfkbia	exon	ENSMUSG00000021025	ProperStrand	11	1	-19.3304
chr1	193606155	193606191	protein_coding	Lpgat1	utr3	ENSMUSG00000026623	ProperStrand	31	chr4	131908687	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.2342
chrX	34667269	34667285	protein_coding	Nkap	exon	ENSMUSG00000016409	NonProperStrand	133	chr15	34370661	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-2.1539
chr1	20927900	20927965	protein_coding	Paqr8	utr3	ENSMUSG00000025931	ProperStrand	3	chr2	130103437	130103500	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-14.4331
chr4	125871594	125871637	protein_coding	Thrap3	utr5	ENSMUSG00000043962	ProperStrand	84	chr11	62416970	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-5.3842
chr11	51413898	51413997	protein_coding	Hnrnpab	utr3	ENSMUSG00000020358	ProperStrand	124	chr19	26785161	26790606	protein_coding	Smarca2	exon	ENSMUSG00000024921	ProperStrand	38	1	-12.7789
chr4	33335115	33335215	protein_coding	Pnrc1	exon	ENSMUSG00000040128	ProperStrand	27	chr16	23111451	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	8	-19.5370
chr17	45708450	45708498	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr14	16271120	16271137	protein_coding	Lrrc3b	utr5	ENSMUSG00000045201	ProperStrand	10	1	-10.3743
chr11	49973158	49973196	protein_coding	Tbc1d9b	exon	ENSMUSG00000036644	ProperStrand	27	chr19	8963085	8963175	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	10	-22.5861
chr7	109789611	109789627	protein_coding	Olfr554	exon	ENSMUSG00000073971	NonProperStrand	66	chr1	39605591	39605658	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-7.1541
chr8	125627810	125628948	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	chr13	46765144	46765160	protein_coding	C78339	exon	ENSMUSG00000069237	NonProperStrand	104	1	-9.5065
chr12	104663677	104663695	protein_coding	Ddx24	intron	ENSMUSG00000041645	NonProperStrand	23	chr17	10512046	10512114	protein_coding	Qk	utr5	ENSMUSG00000062078	ProperStrand	63	1	-15.1485
chr4	128827388	128827469	protein_coding	S100pbp	utr3	ENSMUSG00000040928	ProperStrand	12	chr7	29136553	29136643	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.3856
chr19	4172143	4172242	lincRNA	Gm17552	intron	ENSMUSG00000090702	ProperStrand	2	chr7	117190025	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-10.6222
chr10	86154395	86154485	protein_coding	Hsp90b1	exon	ENSMUSG00000020048	ProperStrand	396	chr11	51551293	51551373	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	1	-4.0242
chr6	25272074	25272091	LTR	MYSERV-int	ERVK	chr6MYSERV-int25271998	ProperStrand	12	chrX	97669736	97669754	SINE	MIRm	MIR	chrXMIRm97669637	ProperStrand	1	1	-inf
chr16	90755219	90756330	protein_coding	Urb1	exon	ENSMUSG00000039929	ProperStrand	71	chr17	24857717	24857797	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.0200
chr3	27138545	27140147	protein_coding	Nceh1	exon	ENSMUSG00000027698	ProperStrand	13	chr16	23110985	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.3283
chr10	26440373	26440395	LTR	MLT1A	MaLR	chr10MLT1A26440151	ProperStrand	1	chr10	23505151	23505260	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-inf
chr9	78327281	78327332	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr18	74938044	74938144	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	ProperStrand	1022	1	-1.2716
chr3	83742605	83744439	protein_coding	D930015E06Rik	exon	ENSMUSG00000033767	ProperStrand	17	chr19	8800361	8800451	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-9.7831
chr2	153587316	153587383	protein_coding	Mapre1	exon	ENSMUSG00000027479	ProperStrand	19	chr9	37155493	37155619	protein_coding	Ccdc15	exon	ENSMUSG00000034303	ProperStrand	6	1	-19.5063
chr18	66155402	66155502	protein_coding	Lman1	intron	ENSMUSG00000041891	ProperStrand	36	chr2	141125413	141125432	protein_coding	Macrod2	intron	ENSMUSG00000068205	NonProperStrand	20	1	-16.5780
chr13	104550781	104550799	protein_coding	Srek1	intron	ENSMUSG00000032621	NonProperStrand	2	chr9	78326820	78326875	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-13.7784
chr19	25016725	25016793	snoRNA	ENSMUSG00000064896_SNORA19	.	ENSMUSG00000064896	ProperStrand	88	chr10	23505150	23505234	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-5.2810
chr15	38428544	38428588	protein_coding	Azin1	exon	ENSMUSG00000037458	ProperStrand	13	chr3	68889145	68889188	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	3	-14.5417
chr3	104023982	104023998	protein_coding	Magi3	utr5	ENSMUSG00000052539	ProperStrand	19	chr14	76247711	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	5	-20.4383
chr15	77356785	77356801	protein_coding	Apol7c	exon	ENSMUSG00000044309	ProperStrand	197	chr11	6428060	6428156	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.2622
chr7	11311316	11314912	protein_coding	Nlrp4b	exon	ENSMUSG00000034087	ProperStrand	14	chr9	15119646	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	4	-17.0209
chr2	73307137	73307160	lincRNA	Gm13708	intron	ENSMUSG00000086069	ProperStrand	1	chr9	45198928	45199653	protein_coding	Fxyd6	exon	ENSMUSG00000066705	NonProperStrand	108	1	-inf
chr15	98692638	98692738	protein_coding	Mll2	exon	ENSMUSG00000048154	ProperStrand	170	chr16	23110554	23110584	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	8	-11.3135
chr11	50122298	50122398	protein_coding	Canx	exon	ENSMUSG00000020368	ProperStrand	296	chr6	125113395	125115300	protein_coding	Gapdh	exon	ENSMUSG00000057666	ProperStrand	356	1	-6.5692
chr5	66029855	66029871	protein_coding	Pds5a	exon	ENSMUSG00000029202	ProperStrand	62	chr3	123210854	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	5	-10.0287
chr15	3934584	3934620	protein_coding	AW549877	utr3	ENSMUSG00000041935	ProperStrand	17	chr17	24857721	24857811	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	3	-11.1918
chr10	41644311	41644329	protein_coding	Armc2	exon	ENSMUSG00000071324	ProperStrand	281	chr19	8798484	8798538	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-2.3712
chr2	37496506	37501043	protein_coding	Strbp	exon	ENSMUSG00000026915	ProperStrand	90	chr8	74994945	74998541	protein_coding	Cherp	exon	ENSMUSG00000052488	ProperStrand	43	2	-24.4146
chr9	100906444	100906463	protein_coding	Pccb	intron	ENSMUSG00000032527	ProperStrand	4	chr1	180267535	180267570	protein_coding	Hnrnpu	exon	ENSMUSG00000039630	ProperStrand	286	1	-15.8608
chr10	33726602	33726682	protein_coding	Rwdd1	intron	ENSMUSG00000019782	NonProperStrand	3	chr6	35055454	35055544	protein_coding	Cnot4	intron	ENSMUSG00000038784	ProperStrand	13	1	-inf
chr1	9930691	9930781	protein_coding	6030422M02Rik	utr3	ENSMUSG00000046101	ProperStrand	3	chr2	172239889	172239969	protein_coding	Cass4	intron	ENSMUSG00000074570	ProperStrand	2	1	-inf
chr19	8800085	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	chr6	71832622	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-0.7839
chr9	15069885	15069901	protein_coding	Med17	exon	ENSMUSG00000031935	ProperStrand	135	chr10	110918549	110918639	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	3	-5.5835
chr10	127506550	127506640	protein_coding	Ptges3	intron	ENSMUSG00000071072	ProperStrand	89	chr8	73419663	73419709	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-6.4614
chr1	45448521	45448537	protein_coding	Col5a2	exon	ENSMUSG00000026042	ProperStrand	184	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-6.6967
chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	chr10	90432659	90432681	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	1	-7.5921
chr18	35714262	35714293	lincRNA	Snhg4	intron	ENSMUSG00000090430	ProperStrand	270	chr6	92104375	92104391	protein_coding	Nr2c2	exon	ENSMUSG00000005893	ProperStrand	101	1	-9.2537
chr14	48283611	48283661	protein_coding	Ktn1	exon	ENSMUSG00000021843	ProperStrand	64	chrX	34622905	34623008	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-3.0550
chr10	66437046	66437063	SINE	B1_Mur3	Alu	chr10B1_Mur366437003	ProperStrand	10	chr11	62416600	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-8.7767
chr11	120583845	120583885	protein_coding	Rac3	exon	ENSMUSG00000018012	ProperStrand	2	chr18	35716848	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-inf
chr3	104764495	104764511	protein_coding	Wnt2b	utr5	ENSMUSG00000027840	NonProperStrand	50	chr11	62416967	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-6.4033
chr12	72238877	72261264	protein_coding	2700049A03Rik	exon	ENSMUSG00000034601	ProperStrand	21	chr18	35716764	35716883	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-6.8619
chr7	134402920	134404064	protein_coding	Dctpp1	exon	ENSMUSG00000042462	ProperStrand	14	chr17	46382579	46382660	protein_coding	Polr1c	exon	ENSMUSG00000067148	ProperStrand	58	1	-16.3792
chr4	133560659	133560710	protein_coding	Lin28a	utr3	ENSMUSG00000050966	ProperStrand	55	chr16	23110894	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-0.9304
chr19	31157712	31157802	protein_coding	Cstf2t	exon	ENSMUSG00000053536	ProperStrand	48	chr16	23111706	23111786	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.2671
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr12	55797772	55797862	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	1	-2.4084
chr7	139203764	139203844	protein_coding	Fgfr2	intron	ENSMUSG00000030849	NonProperStrand	95	chr7	142247986	142248076	protein_coding	Dock1	intron	ENSMUSG00000058325	NonProperStrand	18	1	-14.8213
chr10	12341172	12353751	protein_coding	Utrn	exon	ENSMUSG00000019820	ProperStrand	69	chr5	35448325	35448342	protein_coding	Lrpap1	utr5	ENSMUSG00000029103	ProperStrand	43	1	-13.7062
chr6	50283214	50283231	protein_coding	Osbpl3	exon	ENSMUSG00000029822	NonProperStrand	31	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.8473
chr4	149370039	149370057	protein_coding	H6pd	exon	ENSMUSG00000028980	NonProperStrand	2	chr5	121655029	121655144	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-11.0755
chr19	44110974	44111054	protein_coding	Erlin1	utr3	ENSMUSG00000025198	ProperStrand	9	chr8	13341479	13341569	protein_coding	Tfdp1	intron	ENSMUSG00000038482	ProperStrand	19	1	-19.1915
chr13	3917263	3917363	protein_coding	Net1	utr5	ENSMUSG00000021215	ProperStrand	32	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.4145
chrX	35687797	35687887	protein_coding	Atp1b4	utr3	ENSMUSG00000016327	NonProperStrand	1	chr2	121017968	121018058	protein_coding	Tubgcp4	exon	ENSMUSG00000027263	ProperStrand	30	1	-inf
chr4	154995569	154995614	protein_coding	Slc35e2	utr3	ENSMUSG00000042202	ProperStrand	6	chr4	131908300	131908340	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-5.6461
chr2	168581783	168581873	protein_coding	Sall4	exon	ENSMUSG00000027547	ProperStrand	82	chr16	23111384	23111464	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.8604
chr5	21166397	21168200	protein_coding	Armc10	utr3	ENSMUSG00000038525	ProperStrand	61	chr3	123210854	123210980	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	8	-17.9440
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr10	79256537	79256554	protein_coding	Palm	intron	ENSMUSG00000035863	ProperStrand	58	1	-5.9703
chr4	116675892	116675908	protein_coding	Hectd3	exon	ENSMUSG00000046861	ProperStrand	10	chr13	96100596	96100685	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	1	-11.7260
chr10	127095732	127095748	protein_coding	Stat6	exon	ENSMUSG00000002147	NonProperStrand	9	chr15	34370656	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-7.2969
chr4	131866684	131866780	lincRNA	Snhg12	exon	ENSMUSG00000086290	ProperStrand	178	chr1	88247835	88247876	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	6	-16.3657
chr10	42871461	42871479	protein_coding	Sobp	intron	ENSMUSG00000038248	NonProperStrand	25	chr8	113362430	113362490	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	1	-11.0350
chr11	119346787	119346857	protein_coding	Rnf213	intron	ENSMUSG00000070327	NonProperStrand	13	chr8	98269959	98270059	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-8.6157
chr11	59926669	59926689	lincRNA	4930412M03Rik	intron	ENSMUSG00000051008	ProperStrand	1	chr4	131908298	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-inf
chr12	106002200	106002217	protein_coding	Clmn	utr3	ENSMUSG00000021097	ProperStrand	50	chr10	117207488	117207514	protein_coding	Nup107	exon	ENSMUSG00000052798	ProperStrand	14	1	-16.7298
chr11	98865507	98865556	protein_coding	Top2a	exon	ENSMUSG00000020914	ProperStrand	324	chr13	55067638	55067655	protein_coding	Unc5a	intron	ENSMUSG00000025876	NonProperStrand	96	1	-8.9918
chr10	8327976	8328066	LINE	L1_Mm	L1	chr10L1_Mm8326180	ProperStrand	1	chr10	8331426	8331506	LINE	L1_Mm	L1	chr10L1_Mm8331318	NonProperStrand	1	1	-inf
chrX	102569259	102569275	lincRNA	5330434G04Rik	exon	ENSMUSG00000087620	ProperStrand	29	chr17	24857727	24857770	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.5901
chr6	125112116	125115618	protein_coding	Gapdh	exon	ENSMUSG00000057666	ProperStrand	356	chr4	131908686	131908799	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	7	-1.1597
chr6	122677887	122677938	protein_coding	Slc2a3	utr3	ENSMUSG00000003153	ProperStrand	682	chr17	13112547	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	3	-2.3384
chr11	116332690	116332733	protein_coding	Prpsap1	utr3	ENSMUSG00000015869	ProperStrand	7	chr19	8799043	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-10.2203
chr12	55797802	55797902	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	chr2	91436237	91436261	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	2	-3.9282
chr13	56962394	56962410	protein_coding	Trpc7	exon	ENSMUSG00000021541	ProperStrand	50	chr18	35716707	35716786	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-6.5728
chr18	20209773	20209812	protein_coding	Dsc2	intron	ENSMUSG00000024331	ProperStrand	4	chr5	130300468	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-7.9077
chr13	55449320	55449400	protein_coding	Lman2	intron	ENSMUSG00000021484	ProperStrand	26	chr19	8963013	8963103	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.7706
chr10	25198874	25198946	protein_coding	Epb4.1l2	utr5	ENSMUSG00000019978	ProperStrand	105	chr16	33956184	33956204	protein_coding	Umps	utr3	ENSMUSG00000022814	ProperStrand	20	1	-14.4179
chr10	49845171	49845188	LINE	L1VL4	L1	chr10L1VL449844774	NonProperStrand	17	chr12	17552949	17553029	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-7.6001
chr14	20451772	20451789	LTR	IAPLTR3-int	ERVK	chr14IAPLTR3-int20447903	ProperStrand	44	chr2	158451026	158451043	protein_coding	Actr5	exon	ENSMUSG00000037761	NonProperStrand	94	2	-19.2735
chr4	117908898	117908998	protein_coding	Ptprf	exon	ENSMUSG00000033295	ProperStrand	337	chr19	8799851	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-1.8533
chr14	15151263	15151343	LINE	L1_Mur2	L1	chr14L1_Mur215150124	ProperStrand	1	chr2	181715615	181715705	LINE	L1_Mur2	L1	chr2L1_Mur2181715450	ProperStrand	1	1	-inf
chr7	64966336	64966356	protein_coding	Gabrb3	intron	ENSMUSG00000033676	NonProperStrand	4	chr4	131908252	131908342	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-6.5415
chrX	133314525	133314544	processed_transcript	BC065397	.	ENSMUSG00000087368	ProperStrand	7	chr11	77996554	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	4	-19.0584
chr2	29806200	29808091	protein_coding	Gle1	exon	ENSMUSG00000019715	ProperStrand	16	chr10	23505152	23505217	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-11.9024
chr6	24565083	24565099	protein_coding	Wasl	utr3	ENSMUSG00000029684	NonProperStrand	1	chr3	123210919	123210972	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-inf
chr19	12004387	12004487	protein_coding	Patl1	exon	ENSMUSG00000046139	ProperStrand	49	chr5	130300518	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-7.3969
chr3	88133058	88133165	protein_coding	Tmem79	utr3	ENSMUSG00000001420	ProperStrand	6	chr12	53668017	53668042	protein_coding	Arhgap5	exon	ENSMUSG00000035133	ProperStrand	16	2	-19.4785
chr17	50872537	50872553	protein_coding	Tbc1d5	utr3	ENSMUSG00000023923	NonProperStrand	51	chr19	8798484	8798522	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-5.5288
chr5	111591007	111591024	lincRNA	Ttc28	intron	ENSMUSG00000033209	NonProperStrand	36	chr11	6428076	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.1415
chr15	9784298	9784315	LINE	Lx8	L1	chr15Lx89784083	ProperStrand	5	chr19	8800355	8800410	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-8.5453
chr13	48682047	48682074	protein_coding	Ptpdc1	exon	ENSMUSG00000038042	ProperStrand	7	chr9	15119288	15119365	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	4	-inf
chr14	72956729	72957441	protein_coding	Fndc3a	exon	ENSMUSG00000033487	ProperStrand	84	chr2	166890508	166890556	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-6.8884
chr17	39985630	39985720	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr2	144091920	144091953	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	ProperStrand	549	7	-14.2495
chrX	34667269	34667285	protein_coding	Nkap	exon	ENSMUSG00000016409	NonProperStrand	133	chr9	20241369	20241386	protein_coding	Zfp26	exon	ENSMUSG00000063108	ProperStrand	9	1	-15.5871
chr11	6523906	6523922	protein_coding	Tbrg4	exon	ENSMUSG00000000384	NonProperStrand	56	chr17	35087941	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-5.3345
chr11	95926527	95926547	protein_coding	Ube2z	exon	ENSMUSG00000014349	ProperStrand	41	chr3	108357255	108357355	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	6	-inf
chr6	88040161	88040251	protein_coding	Rpn1	exon	ENSMUSG00000030062	ProperStrand	58	chr16	23110456	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-6.6558
chr7	150429747	150429763	protein_coding	Kcnq1	intron	ENSMUSG00000009545	NonProperStrand	133	chr11	106362638	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-5.8319
chr9	110544350	110544366	protein_coding	Nbeal2	exon	ENSMUSG00000056724	ProperStrand	161	chr11	106362640	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-5.4594
chr5	138732057	138732147	protein_coding	Stag3	exon	ENSMUSG00000036928	ProperStrand	53	chr15	34370546	34370625	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-3.7794
chr14	20621743	20622322	protein_coding	Nid2	exon	ENSMUSG00000021806	ProperStrand	372	chr5	147646767	147646847	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	1	-4.3876
chr6	85412168	85414849	protein_coding	Cct7	exon	ENSMUSG00000030007	ProperStrand	173	chr1	89673759	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	2	-2.8084
chr5	30112944	30112973	protein_coding	Dnajb6	utr3	ENSMUSG00000029131	ProperStrand	81	chr9	21080562	21080620	protein_coding	Kri1	exon	ENSMUSG00000035047	ProperStrand	10	1	-16.3581
chr11	97578156	97578228	protein_coding	Pip4k2b	utr3	ENSMUSG00000018547	ProperStrand	46	chr12	106269284	106269374	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	2	-7.7199
chr7	109163077	109163177	protein_coding	Numa1	utr3	ENSMUSG00000066306	ProperStrand	148	chr2	93041536	93041590	protein_coding	Trp53i11	utr3	ENSMUSG00000068735	ProperStrand	46	1	-12.0367
chr4	43505821	43505911	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr6	33922055	33922136	protein_coding	Exoc4	exon	ENSMUSG00000029763	ProperStrand	120	38	-inf
chr5	76728832	76728848	protein_coding	Clock	intron	ENSMUSG00000029238	NonProperStrand	64	chr17	27559700	27559717	protein_coding	Grm4	utr3	ENSMUSG00000063239	ProperStrand	147	1	-11.3847
chr5	115777461	115780556	protein_coding	Srsf9	exon	ENSMUSG00000029538	ProperStrand	19	chr4	131908357	131908416	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-8.5506
chr1	36284392	36287513	protein_coding	Uggt1	exon	ENSMUSG00000037470	ProperStrand	67	chr4	131908356	131908412	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.2634
chr14	55719332	55719396	protein_coding	Ap1g2	exon	ENSMUSG00000040701	ProperStrand	9	chr16	23110917	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-14.8220
chr3	103306119	103306138	LTR	RMER13B	ERVK	chr3RMER13B103306063	ProperStrand	1	chr2	154171683	154171700	protein_coding	Cdk5rap1	exon	ENSMUSG00000027487	ProperStrand	75	1	-inf
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr10	110918550	110918694	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	7	-5.4535
chr3	107815648	107815668	protein_coding	Gstm1	exon	ENSMUSG00000058135	ProperStrand	27	chr7	116663649	116663767	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-9.7552
chr9	96220711	96220747	protein_coding	Tfdp2	utr3	ENSMUSG00000032411	ProperStrand	95	chr10	23505190	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-1.4196
chr2	25079687	25080088	protein_coding	Tubb4b	exon	ENSMUSG00000036752	ProperStrand	58	chr17	35089182	35089237	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-5.5515
chr2	34681611	34681630	protein_coding-noncoding	Fbxw2	utr3	ENSMUSG00000035949	NonProperStrand	10	chr4	131908236	131908342	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-7.7635
chr5	103321651	103321667	protein_coding	Arhgap24	exon	ENSMUSG00000057315	NonProperStrand	21	chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-9.8582
chrX	166426966	166427036	protein_coding	Mid1	exon	ENSMUSG00000035299	ProperStrand	209	chr7	105786017	105790007	protein_coding	2210018M11Rik	exon	ENSMUSG00000035401	ProperStrand	24	1	-12.6656
chr11	35655268	35655338	protein_coding	Wwc1	exon	ENSMUSG00000018849	ProperStrand	52	chr16	23111721	23111811	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.1343
chr15	36528015	36538493	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr4	131866155	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	5	-1.7442
chr12	97002638	97002654	protein_coding	Flrt2	intron	ENSMUSG00000047414	NonProperStrand	3	chr7	116663712	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-8.5982
chr10	80674669	80675224	protein_coding	Atcay	exon	ENSMUSG00000034958	ProperStrand	94	chr4	131865855	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-2.1888
chr19	32464273	32464289	lincRNA	2700046G09Rik	exon	ENSMUSG00000024893	ProperStrand	59	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-3.6233
chr15	79359584	79359614	protein_coding	Ddx17	utr3	ENSMUSG00000055065	ProperStrand	140	chr2	130101987	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-3.7410
chr18	65973399	65973499	protein_coding-noncoding	Sec11c	utr5	ENSMUSG00000024516	ProperStrand	1	chrX	12868418	12868554	protein_coding	Ddx3x	exon	ENSMUSG00000000787	ProperStrand	67	1	-inf
chr4	41673405	41673421	protein_coding	Il11ra1	intron	ENSMUSG00000073889	ProperStrand	128	chr8	129468834	129468868	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-3.0118
chr6	88578588	88578668	SINE	ID_B1	B4	chr6ID_B188578601	ProperStrand	1	chr6	88570636	88570726	protein_coding	Kbtbd12	intron	ENSMUSG00000033182	ProperStrand	3	1	-inf
chr4	122549501	122549559	protein_coding-noncoding	Cap1	utr3	ENSMUSG00000028656	ProperStrand	2	chr18	33954911	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-inf
chr18	12927053	13004304	protein_coding	Osbpl1a	exon	ENSMUSG00000044252	ProperStrand	39	chr16	23111374	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-3.4767
chr1	179958163	179958253	snRNA	ENSMUSG00000065826_U6	.	ENSMUSG00000065826	ProperStrand	3	chr9	120039540	120039620	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-9.5119
chr5	151580802	151580878	protein_coding	Pds5b	exon	ENSMUSG00000034021	ProperStrand	21	chr4	131865856	131865946	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.5891
chr8	74148115	74148132	protein_coding	Glt25d1	utr3	ENSMUSG00000034807	ProperStrand	36	chr2	26494708	26494791	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-6.8227
chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	chr3	157729963	157729979	protein_coding	Lrrc40	utr3	ENSMUSG00000063052	ProperStrand	147	1	-9.8875
chr11	70688300	70688323	protein_coding	Rabep1	exon	ENSMUSG00000020817	ProperStrand	16	chr1	162968447	162968519	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-8.7363
chr2	126951349	126951867	protein_coding	Ncaph	exon	ENSMUSG00000034906	ProperStrand	43	chr7	116663634	116663727	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	6	-16.9675
chr8	75191618	75191634	protein_coding	Nwd1	exon	ENSMUSG00000048148	ProperStrand	46	chr16	23111450	23111500	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.6437
chr9	72596601	72596621	protein_coding	Nedd4	utr3	ENSMUSG00000032216	NonProperStrand	8	chr11	6428035	6428160	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	NonProperStrand	91	1	-16.5231
chr7	125310693	125310783	protein_coding	Smg1	exon	ENSMUSG00000030655	ProperStrand	70	chr7	117189946	117190026	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.0537
chr14	31867372	31869442	protein_coding	Pbrm1	exon	ENSMUSG00000042323	ProperStrand	87	chr4	32844811	32845340	protein_coding	Mdn1	exon	ENSMUSG00000058006	ProperStrand	184	1	-10.3187
chr2	72244619	72244656	protein_coding	B230120H23Rik	utr3	ENSMUSG00000004085	ProperStrand	34	chr10	110918549	110918639	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-4.5188
chr7	13614014	13614046	protein_coding	Trim28	exon	ENSMUSG00000005566	ProperStrand	296	chr14	31827477	31827510	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-3.8557
chr8	125014831	125015024	protein_coding	Fam38a	exon	ENSMUSG00000014444	ProperStrand	132	chr11	69482353	69482374	snoRNA	ENSMUSG00000089542_snoU6-77	.	ENSMUSG00000089542	ProperStrand	138	2	-15.8556
chr5	145939720	145942010	protein_coding	Cpsf4	exon	ENSMUSG00000029625	ProperStrand	15	chr16	23110454	23110544	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.0488
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr6	125136475	125136575	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	1	-1.5846
chr2	90235311	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	115956842	115983460	protein_coding	Pxn	intron	ENSMUSG00000029528	ProperStrand	171	2	-4.4768
chrX	100767009	100818339	non_coding	B230206F22Rik	.	ENSMUSG00000086370	NonProperStrand	20	chr17	35089181	35089234	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	2	-12.3350
chr1	42755254	42755270	protein_coding	Pou3f3	exon	ENSMUSG00000045515	NonProperStrand	117	chr6	4710228	4710265	protein_coding	Peg10	utr3	ENSMUSG00000092035	ProperStrand	102	1	-10.9059
chr6	121378526	121423195	protein_coding	Iqsec3	exon	ENSMUSG00000040797	NonProperStrand	139	chr4	131865853	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-2.3481
chr10	69654137	69654220	protein_coding	Ccdc6	utr3	ENSMUSG00000048701	ProperStrand	72	chr11	68886928	68887018	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-3.8015
chr8	127389387	127389404	protein_coding	Gnpat	intron	ENSMUSG00000031985	ProperStrand	20	chr2	166890840	166890858	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	1	-12.6099
chr6	102149337	102153833	protein_coding	Cntn3	exon	ENSMUSG00000030075	NonProperStrand	13	chr4	131908236	131908317	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	5	-17.5917
chr6	143021135	143026793	protein_coding	5730419I09Rik	exon	ENSMUSG00000030279	ProperStrand	81	chr2	26494716	26494796	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.5783
chr1	84790335	84790398	protein_coding	Trip12	exon	ENSMUSG00000026219	ProperStrand	248	chr3	95980335	95980362	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-4.1036
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr11	119821537	119842114	protein_coding	Baiap2	exon	ENSMUSG00000025372	ProperStrand	9	1	-12.1985
chr15	79913286	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	15	-0.7805
chr15	85166781	85217526	protein_coding	Atxn10	utr5	ENSMUSG00000016541	ProperStrand	96	chr4	131865390	131865515	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	3	-7.9344
chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	chr5	122832418	122832435	protein_coding	Gpn3	utr3	ENSMUSG00000029464	ProperStrand	19	1	-11.6005
chr9	64834974	64835074	protein_coding	Ptplad1	utr3	ENSMUSG00000033629	ProperStrand	13	chr1	162965989	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-6.5934
chr13	9833558	9833660	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr6	24684480	24684497	protein_coding	Hyal6	exon	ENSMUSG00000029679	NonProperStrand	114	2	-6.3118
chr9	78550960	78550977	protein_coding	Cd109	exon	ENSMUSG00000046186	NonProperStrand	36	chr4	131908687	131908783	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-5.5435
chr2	26768219	26768527	protein_coding	Rpl7a	exon	ENSMUSG00000062647	ProperStrand	234	chr7	148634757	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	9	-18.7152
chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	chr12	88778723	88778768	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-2.6139
chr15	65703195	65703295	protein_coding	Efr3a	utr3	ENSMUSG00000015002	ProperStrand	8	chr16	62900544	62900562	protein_coding	Pros1	intron	ENSMUSG00000022912	ProperStrand	20	1	-18.8046
chr7	26181911	26202421	protein_coding	Lipe	intron	ENSMUSG00000003123	NonProperStrand	63	chr11	62416948	62416991	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-5.9471
chr2	174190308	174190326	LINE	Lx9	L1	chr2Lx9174190220	ProperStrand	2	chr1	88247743	88247799	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	2	-inf
chr5	100855902	100855942	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr8	67235316	67235406	protein_coding	Klhl2	intron	ENSMUSG00000031605	ProperStrand	14	1	-9.5791
chr10	76534368	76534415	protein_coding	Col18a1	exon	ENSMUSG00000001435	ProperStrand	287	chr2	120996550	120996567	protein_coding	Tubgcp4	intron	ENSMUSG00000027263	ProperStrand	30	1	-11.5772
chr2	90235314	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	24578615	24578631	protein_coding	Dnase1l2	exon	ENSMUSG00000024136	NonProperStrand	1	1	-inf
chr13	45078180	45081421	protein_coding	Dtnbp1	exon	ENSMUSG00000057531	ProperStrand	17	chr11	97642972	97643074	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-11.5987
chr7	150717317	150717416	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	chr6	71832605	71832687	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	8	-3.2204
chr14	31827299	31827358	protein_coding	Gnl3	exon	ENSMUSG00000042354	ProperStrand	53	chr2	158185530	158185630	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-6.7319
chr14	45949538	45949554	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	chr2	4912508	4913935	protein_coding	Mcm10	exon	ENSMUSG00000026669	ProperStrand	21	1	-12.0489
chr1	154686388	154686478	protein_coding	Smg7	utr3	ENSMUSG00000042772	ProperStrand	88	chr7	29136526	29136636	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	26	-19.5972
chr13	9494122	9494139	protein_coding	Dip2c	exon	ENSMUSG00000048264	ProperStrand	27	chr16	10744342	10744400	protein_coding	Clec16a	utr3	ENSMUSG00000068663	ProperStrand	24	1	-16.7599
chr2	52974063	52975935	protein_coding	Fmnl2	exon	ENSMUSG00000036053	ProperStrand	35	chr8	32260340	32260420	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-5.6795
chr12	17552949	17553034	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr17	13112454	13112553	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	9	-0.7271
chr18	39927274	39927364	LINE	L1Md_F2	L1	chr18L1Md_F239926632	NonProperStrand	1	chr8	74391389	74391479	LINE	L1Md_F2	L1	chr8L1Md_F274390889	NonProperStrand	1	1	-inf
chr17	15843968	15843984	protein_coding	Chd1	utr5	ENSMUSG00000023852	ProperStrand	82	chr10	23505152	23505260	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-1.7059
chr2	155052230	155052259	protein_coding	Itch	utr3	ENSMUSG00000027598	ProperStrand	9	chr4	131865929	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.2544
chrX	98986902	98986922	antisense	Gm4779	.	ENSMUSG00000045010	ProperStrand	7	chr4	131908300	131908355	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-5.3201
chr18	75390819	75390897	protein_coding	Dym	intron	ENSMUSG00000035765	ProperStrand	22	chr18	75160711	75160754	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	1	-11.2180
chr2	168766271	168766288	protein_coding	Zfp64	exon	ENSMUSG00000027551	NonProperStrand	10	chr3	68889160	68889245	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-6.7595
chr19	47194843	47194898	protein_coding	Pdcd11	exon	ENSMUSG00000025047	ProperStrand	137	chr9	79915104	79915120	protein_coding	Senp6	utr5	ENSMUSG00000034252	ProperStrand	110	1	-10.4387
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr18	33954821	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	11	-19.3792
chr5	151578004	151578044	protein_coding	Pds5b	exon	ENSMUSG00000034021	ProperStrand	21	chrX	34622906	34622932	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-5.1646
chr11	118340415	118340480	protein_coding	Engase	exon	ENSMUSG00000033857	ProperStrand	12	chr17	24857751	24857841	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	3	-12.7264
chr9	62659417	62659456	protein_coding	Fem1b	utr5	ENSMUSG00000032244	ProperStrand	111	chr12	58558857	58558873	protein_coding	Mipol1	intron	ENSMUSG00000047022	ProperStrand	40	1	-12.8967
chr19	23292904	23293004	protein_coding	Smc5	exon	ENSMUSG00000024943	ProperStrand	146	chr16	23111758	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-0.7019
chr9	115906853	115906869	antisense	Gm16142	.	ENSMUSG00000087469	ProperStrand	9	chr11	62418037	62418069	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-9.4009
chr19	6121890	6122092	protein_coding	Snx15	exon	ENSMUSG00000024787	ProperStrand	7	chr16	23110969	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-6.1472
chr4	128899900	128899916	protein_coding	C77080	exon	ENSMUSG00000050390	NonProperStrand	28	chr11	97642952	97643007	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.8483
chr13	99083696	99086204	protein_coding	Btf3	exon	ENSMUSG00000021660	ProperStrand	64	chr11	69483136	69483231	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.3405
chr7	26181911	26202421	protein_coding	Lipe	intron	ENSMUSG00000003123	NonProperStrand	63	chr11	106853265	106853313	protein_coding	Kpna2	exon	ENSMUSG00000018362	ProperStrand	70	1	-12.9068
chr6	112689098	112689322	protein_coding	Srgap3	exon	ENSMUSG00000030257	NonProperStrand	208	chr11	97642979	97643020	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-0.6941
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr11	106362303	106362325	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-1.1546
chr5	123321722	123397884	protein_coding	Kdm2b	utr3	ENSMUSG00000029475	ProperStrand	30	chr15	34370545	34370623	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-8.0698
chr5	122262568	122262658	protein_coding	Atxn2	intron	ENSMUSG00000042605	ProperStrand	83	chr4	131908258	131908338	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.9830
chr19	6339402	6339484	protein_coding	Men1	exon	ENSMUSG00000024947	ProperStrand	24	chr10	23505190	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.6868
chr11	69730623	69730671	protein_coding	Eif5a	utr3	ENSMUSG00000078812	ProperStrand	164	chr1	162967498	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-1.7560
chr14	15572351	15572370	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr1	167071066	167071083	protein_coding	Tbx19	intron	ENSMUSG00000026572	NonProperStrand	2	1	-19.0065
chr6	56673585	56675152	protein_coding	Avl9	exon	ENSMUSG00000029787	ProperStrand	21	chr11	97642989	97643079	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.3990
chr4	140258345	140263896	protein_coding	Rcc2	exon	ENSMUSG00000040945	ProperStrand	228	chr5	14252800	14252816	protein_coding	Sema3e	utr3	ENSMUSG00000063531	ProperStrand	125	1	-9.1646
chr18	34759299	34759315	protein_coding	Brd8	utr3	ENSMUSG00000003778	ProperStrand	27	chr7	147094875	147094892	protein_coding	Kndc1	exon	ENSMUSG00000066129	NonProperStrand	17	1	-17.4194
chr13	30077379	30077441	protein_coding	E2f3	exon	ENSMUSG00000016477	ProperStrand	8	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-12.2901
chr7	137903518	137907826	protein_coding	Tacc2	exon	ENSMUSG00000030852	ProperStrand	95	chr5	74489596	74489676	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-2.9409
chr11	70796427	70796505	protein_coding	C1qbp	utr5	ENSMUSG00000018446	ProperStrand	46	chrX	101153175	101153262	protein_coding	Rlim	utr3	ENSMUSG00000056537	ProperStrand	38	1	-14.7680
chr2	150784586	150785592	protein_coding	Ninl	exon	ENSMUSG00000068115	ProperStrand	51	chr18	35716832	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.4421
chr11	86355650	86355704	protein_coding	Rps6kb1	intron	ENSMUSG00000020516	ProperStrand	16	chr12	112779226	112779283	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	6	-19.5741
chr1	53409486	53409502	protein_coding	Asnsd1	utr5	ENSMUSG00000026095	NonProperStrand	105	chr7	117190013	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.3492
chr17	4082890	4082929	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr2	172825858	172825875	protein_coding	Rae1	utr5	ENSMUSG00000027509	NonProperStrand	44	1	-10.5901
chr19	27345257	27345274	LTR	RLTR23	ERV1	chr19RLTR2327344981	NonProperStrand	1	chr9	120039533	120039610	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-inf
chr1	133025320	133025420	protein_coding	Dyrk3	exon	ENSMUSG00000016526	ProperStrand	6	chr14	79969050	79969096	protein_coding	Elf1	exon	ENSMUSG00000036461	ProperStrand	15	2	-19.9436
chrX	105951722	105952900	protein_coding	Brwd3	exon	ENSMUSG00000063663	ProperStrand	16	chr1	88247741	88247802	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-7.7318
chr18	38417696	38417796	protein_coding	0610009O20Rik	exon	ENSMUSG00000024442	ProperStrand	25	chr7	118219574	118219612	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-9.6044
chr5	34692562	34695691	protein_coding	Rnf4	exon	ENSMUSG00000029110	ProperStrand	27	chr16	23111420	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-9.2367
chrX	7483766	7483857	protein_coding	Timm17b	utr3	ENSMUSG00000031158	ProperStrand	36	chr16	59733199	59733217	protein_coding	Epha6	intron	ENSMUSG00000055540	ProperStrand	9	1	-18.2601
chr15	78707625	78707663	protein_coding	Gga1	utr5	ENSMUSG00000033128	ProperStrand	15	chr2	32818815	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-8.2480
chr11	6428104	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	NonProperStrand	91	chrX	34622920	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	NonProperStrand	26	1	-14.1711
chr2	78712618	78753840	protein_coding	Ube2e3	exon	ENSMUSG00000027011	ProperStrand	8	chr3	88497852	88497914	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-11.5861
chr12	16946876	16946930	protein_coding	Rock2	intron	ENSMUSG00000020580	ProperStrand	27	chr7	116663634	116663724	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.9611
chr17	36405587	36405603	protein_coding	Trim39	utr5	ENSMUSG00000045409	NonProperStrand	8	chr17	28209561	28209639	protein_coding	Tcp11	intron	ENSMUSG00000062859	ProperStrand	3	1	-21.9894
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr2	22691515	22691531	protein_coding	Apbb1ip	exon	ENSMUSG00000026786	ProperStrand	5	1	-18.0233
chr9	55994335	55994394	protein_coding	Tspan3	exon	ENSMUSG00000032324	ProperStrand	10	chr10	23505151	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-10.8346
chr14	76247711	76247842	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	chrX	34622906	34623036	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	37	-1.5561
chr11	5870433	5870475	protein_coding	Camk2b	utr3	ENSMUSG00000057897	ProperStrand	14	chr7	116663738	116663763	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-5.2435
chr1	164474592	164474636	protein_coding-noncoding	Mettl13	utr3	ENSMUSG00000026694	ProperStrand	1	chr1	24621377	24621394	protein_coding	Gm10925	exon	ENSMUSG00000090378	NonProperStrand	70	1	-inf
chr3	97902029	97941460	protein_coding	Notch2	exon	ENSMUSG00000027878	ProperStrand	86	chr1	162965994	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	3	-7.5476
mmu-miR-2137	0	19	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	1	-8.3224
chr5	65841538	65841599	protein_coding	1110003E01Rik	utr3	ENSMUSG00000037822	ProperStrand	10	chr7	150717298	150717350	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	3	-20.8273
chr8	86458342	86458373	protein_coding	Lphn1	exon	ENSMUSG00000013033	ProperStrand	221	chr11	77996560	77996596	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-3.5944
chr19	45588110	45588139	protein_coding	Btrc	intron	ENSMUSG00000025217	ProperStrand	14	chr9	59513168	59513693	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	1	-10.1261
chr9	44188687	44188982	protein_coding	Hyou1	exon	ENSMUSG00000032115	ProperStrand	145	chr16	23111701	23111781	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-0.7092
chr10	79223762	79224181	protein_coding	Rnf126	exon	ENSMUSG00000035890	ProperStrand	30	chr16	23111385	23111479	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-6.3166
chr15	44503444	44503460	protein_coding	Sybu	utr3	ENSMUSG00000022340	NonProperStrand	28	chr8	73419703	73419774	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-7.6061
chr6	120901325	120901342	protein_coding	Mical3	exon	ENSMUSG00000051586	ProperStrand	104	chr2	132134392	132134408	protein_coding	Cds2	utr3	ENSMUSG00000058793	ProperStrand	47	1	-12.7036
chrX	130496426	130496668	protein_coding	Sytl4	exon	ENSMUSG00000031255	ProperStrand	169	chr9	75069464	75069518	protein_coding	Myo5a	utr3	ENSMUSG00000034593	ProperStrand	89	1	-10.4432
chr16	93764187	93764215	protein_coding	Dopey2	exon	ENSMUSG00000022946	ProperStrand	22	chr12	88778631	88778731	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	2	-13.5839
chr7	3657461	3658285	protein_coding	Rps9	exon	ENSMUSG00000006333	ProperStrand	87	chr17	24665440	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-4.2295
chr2	90235299	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr12	119301895	119301912	protein_coding	Dnahc11	intron	ENSMUSG00000018581	ProperStrand	65	1	-4.3101
chr4	122924412	122924429	protein_coding	Heyl	utr3	ENSMUSG00000032744	ProperStrand	31	chr11	69483136	69483225	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.6332
chr3	30097686	30097706	protein_coding	Mecom	intron	ENSMUSG00000027684	NonProperStrand	23	chr11	98878341	98878468	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-8.2042
chr5	21292644	21292663	protein_coding	Psmc2	exon	ENSMUSG00000028932	ProperStrand	27	chr16	23111706	23111826	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.2801
chr9	40827893	40827910	protein_coding	Ubash3b	intron	ENSMUSG00000032020	ProperStrand	42	chr18	20846294	20846318	protein_coding	B4galt6	utr3	ENSMUSG00000056124	ProperStrand	31	1	-15.3511
chr1	162966813	162966859	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	chr5	74489544	74489684	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	13	-3.3811
chr1	138382212	138382230	protein_coding	Kif14	intron	ENSMUSG00000041498	NonProperStrand	36	chr15	34370545	34370605	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-4.5131
chr17	85489478	85489578	protein_coding	Prepl	utr5	ENSMUSG00000024127	ProperStrand	106	chr8	32260335	32260381	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	2	-6.0403
chr1	134887494	134887587	protein_coding	Mdm4	utr3	ENSMUSG00000054387	ProperStrand	95	chr9	15119733	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.8678
chr11	4382245	4382262	protein_coding	Mtmr3	utr3	ENSMUSG00000034354	ProperStrand	25	chr4	131865866	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.2649
chr7	129085576	129085593	protein_coding	Cog7	intron	ENSMUSG00000034951	ProperStrand	29	chr9	120037991	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-6.1297
chr13	21872293	21872393	protein_coding	Hist1h1b	exon	ENSMUSG00000058773	ProperStrand	65	chr10	110918635	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-3.3024
chr11	34135846	34135863	protein_coding	Dock2	intron	ENSMUSG00000020143	NonProperStrand	31	chr4	131865380	131865456	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	2	-8.6853
chr8	129469470	129469509	protein_coding	Tomm20	intron	ENSMUSG00000058779	ProperStrand	55	chr16	23111451	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-2.6254
chr6	119874346	119919423	protein_coding	Wnk1	exon	ENSMUSG00000045962	ProperStrand	221	chr18	35716703	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-1.7930
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	2	-4.8797
chr4	53029925	53029976	protein_coding	Nipsnap3b	exon	ENSMUSG00000015247	ProperStrand	3	chr11	50628361	50628377	protein_coding	Zfp354c	exon	ENSMUSG00000044807	ProperStrand	21	1	-20.8842
chr11	52071298	52072406	protein_coding	Tcf7	exon	ENSMUSG00000000782	ProperStrand	24	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-10.0076
chr5	124801090	124801107	protein_coding	Cdk2ap1	intron	ENSMUSG00000029394	NonProperStrand	15	chr19	8963084	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.8348
chr8	63408219	63408267	protein_coding	Clcn3	exon	ENSMUSG00000004319	ProperStrand	93	chr4	6323941	6325488	protein_coding	Nsmaf	exon	ENSMUSG00000028245	ProperStrand	15	5	-21.5001
chr1	123216288	123216345	protein_coding	Insig2	exon	ENSMUSG00000003721	ProperStrand	4	chr17	24342578	24342596	protein_coding	Ntn3	utr3	ENSMUSG00000079662	ProperStrand	237	1	-16.2170
chr11	77996560	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	chr1	145626105	145626195	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	6	-12.1260
chr4	131865853	131865943	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	NonProperStrand	39	chr18	35714172	35714252	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.2497
chr2	121949511	121949527	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	chr3	57379082	57379100	protein_coding	Wwtr1	exon	ENSMUSG00000027803	ProperStrand	7	1	-14.7229
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr12	112779213	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-0.9747
chr8	73419657	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	chr5	74489544	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	41	-0.6943
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr7	52713407	52714495	protein_coding	Ftl1	utr3	ENSMUSG00000050708	ProperStrand	807	2	-3.0217
chr16	71924522	71924538	LINE	Lx7	L1	chr16Lx771923684	ProperStrand	11	chr9	64023228	64023287	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	1	-11.9050
chr12	110881051	110881114	lincRNA	Rian	intron	ENSMUSG00000091793	ProperStrand	612	chr14	79044783	79044869	protein_coding	Dgkh	intron	ENSMUSG00000034731	ProperStrand	29	1	-10.1324
chr2	160538492	160538514	protein_coding	Top1	exon	ENSMUSG00000070544	ProperStrand	14	chr7	116664816	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-8.7689
chr2	155747375	155747455	protein_coding	Uqcc	utr5	ENSMUSG00000005882	ProperStrand	13	chr5	121655036	121655126	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-6.7475
chr19	8948106	8948174	protein_coding	Ubxn1	exon	ENSMUSG00000071655	ProperStrand	68	chr14	31827477	31827545	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-6.6964
chr19	8799828	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	chr12	110874246	110874290	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	1	-1.9497
chr2	120872244	120872260	protein_coding	Tgm5	exon	ENSMUSG00000053675	NonProperStrand	163	chr14	76247752	76247775	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-2.3717
chr5	115940328	115940383	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	chr3	108357352	108357442	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-0.7967
chr7	109149271	109149287	protein_coding	Numa1	exon	ENSMUSG00000066306	NonProperStrand	171	chr11	98878384	98878429	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-4.2558
chr4	137121612	137121652	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	chr11	116938556	116938664	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-1.4696
chr19	46157379	46157479	protein_coding	Nolc1	exon	ENSMUSG00000015176	ProperStrand	53	chr4	115484059	115484084	protein_coding	Atpaf1	utr3	ENSMUSG00000028710	ProperStrand	202	1	-11.1282
chr10	82418137	82418161	LTR	MT2B2	ERVL	chr10MT2B282418137	NonProperStrand	12	chr7	52958453	52958469	protein_coding	Car11	exon	ENSMUSG00000003273	NonProperStrand	250	1	-13.7354
chr11	118900007	118900023	protein_coding	Cbx8	exon	ENSMUSG00000025578	ProperStrand	95	chr2	76629011	76629027	protein_coding	Ttn	exon	ENSMUSG00000051747	NonProperStrand	27	1	-14.0071
chr2	12217044	12217062	protein_coding	Itga8	intron	ENSMUSG00000026768	NonProperStrand	3	chr5	121655016	121655155	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-9.9796
chr1	138364605	138364676	protein_coding	Kif14	exon	ENSMUSG00000041498	ProperStrand	13	chr10	23505190	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.8218
chr3	34529499	34529516	non_coding	Sox2ot	.	ENSMUSG00000090828	ProperStrand	25	chr19	8963129	8963167	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.8447
chr11	58703694	58703710	antisense	Gm12256	.	ENSMUSG00000087654	ProperStrand	1	chr11	116714155	116714263	protein_coding	Mfsd11	intron	ENSMUSG00000020818	ProperStrand	9	1	-inf
chr9	60704006	60704022	protein_coding	Uaca	exon	ENSMUSG00000034485	ProperStrand	109	chr16	23111385	23111511	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-1.2051
chr2	90235286	90235346	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	13	-9.9307
chr2	152163523	152163539	protein_coding	Trib3	utr3	ENSMUSG00000032715	NonProperStrand	46	chr1	162967490	162967517	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-3.9691
chr3	94167315	94167331	protein_coding	C2cd4d	utr5	ENSMUSG00000091648	ProperStrand	30	chr5	130300442	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-6.3836
chr2	163980882	163980922	protein_coding	Stk4	utr3	ENSMUSG00000018209	ProperStrand	20	chr15	77597977	77597993	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	1	-11.0318
chr18	35519712	35519745	protein_coding	Sil1	intron	ENSMUSG00000024357	ProperStrand	31	chr7	116664794	116664884	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	7	-20.3042
chr7	54441647	54441749	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	chr1	79603761	79603880	protein_coding	Ap1s3	utr3	ENSMUSG00000054702	ProperStrand	4	2	-22.3675
chr1	182516082	182517397	protein_coding	Parp1	exon	ENSMUSG00000026496	ProperStrand	227	chr15	98356819	98356901	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	7	-20.2394
chr7	103852448	103852506	protein_coding	Odz4	exon	ENSMUSG00000048078	ProperStrand	93	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.8015
chr10	92959330	92959347	protein_coding	Hal	exon	ENSMUSG00000020017	ProperStrand	4	chr2	153050783	153050799	protein_coding	Tspyl3	exon	ENSMUSG00000074671	ProperStrand	228	1	-16.3245
chr9	72519046	72519092	protein_coding	Nedd4	exon	ENSMUSG00000032216	ProperStrand	308	chr14	57204539	57204555	protein_coding	Parp4	exon	ENSMUSG00000054509	NonProperStrand	113	1	-8.7669
chr14	70196706	70196755	protein_coding	Rhobtb2	exon	ENSMUSG00000022075	ProperStrand	22	chr10	110918660	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-5.3693
chr7	13886370	13886764	protein_coding	Lig1	exon	ENSMUSG00000056394	ProperStrand	89	chr16	23111466	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.7670
chr11	113523870	113523887	protein_coding	Cog1	utr3	ENSMUSG00000018661	ProperStrand	51	chr10	23505152	23505196	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.4625
chr1	59749360	59749429	snoRNA	ENSMUSG00000077358_SNORD70	.	ENSMUSG00000077358	ProperStrand	63	chr16	23110840	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-3.1138
chr19	21466852	21466868	protein_coding	Gda	utr3	ENSMUSG00000058624	ProperStrand	2	chr19	8963027	8963127	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-9.4105
chr1	69500434	69500452	LTR	MTEa	MaLR	chr1MTEa69500411	NonProperStrand	1	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-inf
chr11	60021614	60021714	protein_coding	Srebf1	intron	ENSMUSG00000020538	ProperStrand	24	chr4	49288465	49288482	protein_coding	E130309F12Rik	intron	ENSMUSG00000063446	ProperStrand	10	1	-19.2433
chr6	122682414	122682462	protein_coding	Slc2a3	exon	ENSMUSG00000003153	ProperStrand	682	chr16	15903051	15903094	protein_coding	2310008H04Rik	exon	ENSMUSG00000041974	ProperStrand	30	2	-15.5869
chr7	120378189	120418150	protein_coding	Arntl	utr5	ENSMUSG00000055116	ProperStrand	14	chr19	8799835	8799889	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-7.8511
chr2	155375216	155375252	protein_coding	Acss2	exon	ENSMUSG00000027605	ProperStrand	11	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-10.3714
chr9	56909935	56909951	protein_coding	Ptpn9	utr3	ENSMUSG00000032290	ProperStrand	10	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-14.4343
chr4	123413548	123413564	protein_coding	Akirin1	utr3	ENSMUSG00000023075	ProperStrand	13	chr4	131908688	131908810	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-13.0451
chr9	50816824	50816843	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	chr19	8963086	8963183	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-2.2178
chr14	26408798	26408816	protein_coding	Zmiz1	intron	ENSMUSG00000007817	ProperStrand	34	chr9	61762192	61762223	protein_coding	Rplp1	exon	ENSMUSG00000007892	ProperStrand	116	1	-13.1338
chr10	128255948	128255999	protein_coding	Ormdl2	exon	ENSMUSG00000025353	ProperStrand	51	chr7	29136620	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-4.6398
chr12	74213386	74213435	protein_coding	Six4	exon	ENSMUSG00000034460	ProperStrand	33	chr11	97642982	97643072	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.5405
chr19	43976441	43976541	protein_coding	Dnmbp	utr5	ENSMUSG00000025195	ProperStrand	15	chr11	77995189	77995254	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-8.9745
chr11	80286599	80286625	protein_coding	Psmd11	utr3	ENSMUSG00000017428	ProperStrand	34	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.6681
chr15	76541224	76541240	protein_coding	Lrrc14	utr5	ENSMUSG00000033728	ProperStrand	52	chr14	31827478	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-7.2295
chr7	4744587	4744978	protein_coding	Rpl28	utr5	ENSMUSG00000030432	ProperStrand	220	chr8	74147854	74147903	protein_coding	Glt25d1	utr3	ENSMUSG00000034807	ProperStrand	36	1	-11.7390
chr17	46663594	46663610	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr7	51505506	51505592	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	1	-4.7660
chr7	52378277	52378316	protein_coding	Rps11	exon	ENSMUSG00000003429	ProperStrand	49	chr16	23111389	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-4.5341
chr15	55139526	55160713	protein_coding	Col14a1	utr5	ENSMUSG00000022371	NonProperStrand	10	chr5	108334200	108334329	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	3	-18.5346
chr13	48987296	48987325	protein_coding	Fam120a	exon	ENSMUSG00000038014	ProperStrand	76	chr3	123210854	123210927	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-4.8351
chr8	67197741	67197819	protein_coding	Sc4mol	utr3	ENSMUSG00000031604	ProperStrand	24	chr4	131908716	131908896	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	9	-20.1591
chr19	5719336	5719352	protein_coding	Ehbp1l1	exon	ENSMUSG00000024937	ProperStrand	75	chr9	120038492	120038552	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.6457
chr2	158182202	158182277	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	chr15	98356818	98356846	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	2	-1.1601
chr2	127954707	127972824	protein_coding	Bcl2l11	exon	ENSMUSG00000027381	ProperStrand	5	chr19	8963086	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-7.1260
chr15	98918021	98918037	protein_coding	C1ql4	exon	ENSMUSG00000001076	NonProperStrand	2	chr16	18240816	18240906	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	1	-16.6616
chr1	95319927	95320409	protein_coding	Hdlbp	exon	ENSMUSG00000034088	ProperStrand	97	chr2	26493403	26493483	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	11	-inf
chr12	88289017	88289034	protein_coding	2310044G17Rik	intron	ENSMUSG00000034157	ProperStrand	48	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-9.3750
chr17	66468411	66468427	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	chr2	32526947	32527002	protein_coding	Eng	exon	ENSMUSG00000026814	ProperStrand	29	1	-11.3248
chr6	52521600	52521690	protein_coding	Hibadh	intron	ENSMUSG00000029776	ProperStrand	33	chr8	129468801	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-5.5742
chr9	88419023	88419041	SINE	B4	B4	chr9B488418988	ProperStrand	75	chr9	37458945	37460221	protein_coding	Tbrg1	exon	ENSMUSG00000011114	ProperStrand	56	1	-13.0048
chr13	9833552	9833615	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr12	86715392	86715425	protein_coding	Tmed10	exon	ENSMUSG00000021248	ProperStrand	34	1	-6.0677
chr11	40887114	40887204	LINE	Lx	L1	chr11Lx40886609	ProperStrand	1	chr3	78968711	78968791	protein_coding	Rapgef2	intron	ENSMUSG00000062232	NonProperStrand	6	1	-inf
chr11	119136228	119136244	protein_coding	Gaa	exon	ENSMUSG00000025579	NonProperStrand	201	chr19	8963022	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-2.1997
chr9	45471663	45471697	protein_coding	Dscaml1	intron	ENSMUSG00000032087	ProperStrand	23	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-8.9102
chr11	102294588	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr15	82980082	82980188	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	3	-7.4569
chr4	131908384	131908464	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr9	122762079	122762169	protein_coding	Zfp445	exon	ENSMUSG00000047036	ProperStrand	8	1	-11.3835
chr3	35705866	35705885	protein_coding	Atp11b	exon	ENSMUSG00000037400	ProperStrand	39	chr16	18240808	18240931	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	2	-15.7522
chr10	48570964	48571044	LTR	RMER16-int	ERVK	chr10RMER16-int48570449	ProperStrand	1	chr10	49507860	49507950	protein_coding	Grik2	intron	ENSMUSG00000056073	ProperStrand	8	1	-inf
chr7	116664807	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	chr7	67125757	67125847	snoRNA	ENSMUSG00000089375_Snord107	.	ENSMUSG00000089375	ProperStrand	451	3	-0.7827
chr11	69219229	69219307	protein_coding	Kdm6b	exon	ENSMUSG00000018476	ProperStrand	76	chr2	26768317	26768557	protein_coding	Rpl7a	exon	ENSMUSG00000062647	ProperStrand	234	3	-19.9653
chr4	131908285	131908375	lincRNA	Gm17300	exon	ENSMUSG00000091021	ProperStrand	109	chr14	63287571	63287607	snoRNA	ENSMUSG00000089531_SNORA73	.	ENSMUSG00000089531	NonProperStrand	2	1	-22.1591
chr4	114933107	114933187	LINE	L1Md_F2	L1	chr4L1Md_F2114932885	NonProperStrand	1	chr5	109466326	109466416	LINE	L1Md_F2	L1	chr5L1Md_F2109465446	NonProperStrand	1	1	-inf
chr12	109301718	109301798	DNA	Tigger7	MER2_type	chr12Tigger7109301735	ProperStrand	1	chr12	109301603	109301693	Simple_repeat	(TG)n	Simple_repeat	chr12(TG)n109301509	NonProperStrand	1	1	-inf
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr19	48340554	48340571	protein_coding	Sorcs3	intron	ENSMUSG00000063434	NonProperStrand	43	1	-8.4627
chr11	53083329	53083353	protein_coding	Hspa4	exon	ENSMUSG00000020361	ProperStrand	69	chr9	120038613	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.7911
chr11	95835490	95836595	protein_coding	Igf2bp1	exon	ENSMUSG00000013415	ProperStrand	140	chr7	116663633	116663723	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.1995
chr16	30514154	30514171	protein_coding	Tmem44	utr3	ENSMUSG00000022537	ProperStrand	217	chr11	102294590	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	1	-6.3394
chr6	92104375	92104391	protein_coding	Nr2c2	exon	ENSMUSG00000005893	ProperStrand	101	chr15	89124692	89124735	protein_coding	Sbf1	exon	ENSMUSG00000036529	ProperStrand	85	1	-11.5667
chr10	86241868	86241888	protein_coding	Nt5dc3	exon	ENSMUSG00000054027	NonProperStrand	5	chr10	23505150	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-5.7809
chr9	103944582	103944614	protein_coding	Nphp3	utr3	ENSMUSG00000032558	ProperStrand	6	chr18	35714144	35714234	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	3	-18.6849
chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	chr6	71832629	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	2	-3.7762
chr16	17927723	17928092	protein_coding	Slc25a1	exon	ENSMUSG00000003528	ProperStrand	23	chrX	152009278	152009294	protein_coding	Ptchd1	exon	ENSMUSG00000041552	NonProperStrand	294	1	-12.0697
chr9	12334863	12334883	LINE	Lx4B	L1	chr9Lx4B12334799	ProperStrand	3	chr8	13876174	13876226	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-13.4971
chr18	75127227	75127244	LINE	L2b	L2	chr18L2b75127181	ProperStrand	19	mmu-miR-6240	2	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	1	-8.2060
chr9	71326653	71326698	protein_coding	Polr2m	utr3	ENSMUSG00000032199	ProperStrand	83	chr5	136672745	136672783	protein_coding	Prkrip1	intron	ENSMUSG00000039737	ProperStrand	52	1	-12.9481
chr16	57391628	57391718	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr12	4234149	4234239	protein_coding	2410017P09Rik	exon	ENSMUSG00000073240	ProperStrand	2	1	-18.0561
chr9	54756597	54756697	protein_coding	Ireb2	exon	ENSMUSG00000032293	ProperStrand	45	chr7	118219702	118219737	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	5	-18.8151
chr7	52389929	52390009	protein_coding-noncoding	Flt3l	utr3	ENSMUSG00000089989	ProperStrand	1	chr7	52389721	52389811	protein_coding	Rpl13a	intron	ENSMUSG00000074129	ProperStrand	269	1	-inf
chr6	97153546	97153587	protein_coding	Uba3	exon	ENSMUSG00000030061	ProperStrand	37	chr12	60141322	60141412	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-7.7946
chr7	138044140	138045715	protein_coding	Plekha1	exon	ENSMUSG00000040268	ProperStrand	15	chr16	23110840	23110860	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.0842
chr9	64023237	64023317	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	chr4	56910496	56910586	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-1.6839
chr17	88077661	88085644	protein_coding	Msh2	exon	ENSMUSG00000024151	ProperStrand	124	chr19	8963083	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	7	-10.8468
chr8	72613823	72613839	protein_coding	Hapln4	utr3	ENSMUSG00000007594	NonProperStrand	85	chr8	73419712	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.5178
chr8	73921627	73921670	protein_coding	5430437P03Rik	exon	ENSMUSG00000031820	ProperStrand	11	chr10	127564144	127564234	protein_coding	Baz2a	utr3	ENSMUSG00000040054	ProperStrand	274	1	-13.7362
chr1	89105750	89105766	protein_coding	Chrng	exon	ENSMUSG00000026253	NonProperStrand	130	chr8	32260393	32260426	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-3.1872
chr5	151369628	151369645	protein_coding	Brca2	exon	ENSMUSG00000041147	NonProperStrand	2	chr11	6428051	6428088	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-10.4671
chr9	121355850	121355930	protein_coding	Trak1	exon	ENSMUSG00000032536	ProperStrand	152	chr5	111121072	111121162	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-4.6241
chr13	9833563	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr3	108153911	108153973	protein_coding	Sort1	intron	ENSMUSG00000068747	NonProperStrand	6	1	-9.6506
chr16	20684332	20684386	snoRNA	ENSMUSG00000077239_Snord66	.	ENSMUSG00000077239	ProperStrand	159	chr3	108357255	108357355	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-2.7468
chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr11	5180669	5180685	protein_coding	Znrf3	utr3	ENSMUSG00000041961	NonProperStrand	210	1	-4.0316
chr8	98331290	98331307	protein_coding	Cnot1	utr5	ENSMUSG00000036550	ProperStrand	315	chr11	62416950	62417027	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-2.9107
chr11	97643382	97643472	protein_coding-noncoding	Rpl23	utr3	ENSMUSG00000071415	NonProperStrand	1	chr11	97643271	97643351	protein_coding	Rpl23	utr5	ENSMUSG00000071415	NonProperStrand	4	1	-inf
chr3	153575129	153575168	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	chr11	97641452	97641488	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	1	-3.2125
chr19	8799590	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	chr12	106269287	106269436	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	6	-1.3818
chr14	76926611	76926627	LINE	L1MB3	L1	chr14L1MB376926376	ProperStrand	61	chr8	3455511	3455527	protein_coding	Arhgef18	utr3	ENSMUSG00000004568	ProperStrand	26	1	-14.9681
chr16	30514154	30514171	protein_coding	Tmem44	utr3	ENSMUSG00000022537	ProperStrand	217	chr1	167529465	167529515	protein_coding	Mpzl1	intron	ENSMUSG00000026566	ProperStrand	27	1	-12.3503
chr13	30338189	30338206	protein_coding	Mboat1	utr3	ENSMUSG00000038732	NonProperStrand	148	chr17	35299507	35299631	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	5	-13.4794
chr19	32464273	32464289	lincRNA	2700046G09Rik	exon	ENSMUSG00000024893	ProperStrand	59	chr5	121655016	121655097	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.7789
chr19	4316384	4316420	protein_coding	Kdm2a	utr3	ENSMUSG00000054611	ProperStrand	71	chr11	97642952	97643089	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-5.9313
chr5	121655444	121656716	protein_coding	Rpl6	exon	ENSMUSG00000029614	ProperStrand	332	chr9	15118245	15118336	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-1.6270
chr18	38610730	38610748	protein_coding	Ndfip1	intron	ENSMUSG00000024425	ProperStrand	42	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-7.9471
chr11	53086228	53086256	protein_coding	Hspa4	exon	ENSMUSG00000020361	ProperStrand	69	chr8	24168986	24169002	protein_coding	Ank1	utr5	ENSMUSG00000031543	NonProperStrand	7	1	-17.5140
chr11	60538751	60540709	protein_coding	Flii	utr5	ENSMUSG00000002812	ProperStrand	42	chr16	23111443	23111505	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.7838
chr9	96019991	96020007	protein_coding	Gk5	exon	ENSMUSG00000041440	NonProperStrand	4	chr6	115757992	115758127	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-11.0996
chr7	34992746	34993269	protein_coding	Gpi1	exon	ENSMUSG00000036427	ProperStrand	288	chr1	162965548	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	7	-8.9007
chr3	144141680	144141697	protein_coding	Hs2st1	intron	ENSMUSG00000040151	NonProperStrand	31	chr4	131865855	131865896	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.8751
chr6	34860065	34860165	protein_coding	Wdr91	intron	ENSMUSG00000058486	ProperStrand	15	chr1	89673606	89673652	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-5.9364
chr18	70728114	70728132	protein_coding	Mbd2	utr5	ENSMUSG00000024513	NonProperStrand	13	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.3283
chr3	153568682	153568700	protein_coding	Msh4	exon	ENSMUSG00000005493	ProperStrand	2	chr5	121655016	121655096	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-11.0755
chr11	68886927	68887065	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	chrX	71517821	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	18	-11.7354
chr18	35102297	35102342	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	chr2	91436228	91436335	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-1.3463
chr11	98862304	98862328	protein_coding	Top2a	exon	ENSMUSG00000020914	ProperStrand	324	chr16	18240810	18240928	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	2	-9.4133
chr11	23182662	23184255	protein_coding	Xpo1	exon	ENSMUSG00000020290	ProperStrand	123	chr1	138000009	138000033	protein_coding	Cacna1s	intron	ENSMUSG00000026407	NonProperStrand	37	1	-12.8483
chr4	46554810	46554826	protein_coding	Coro2a	exon	ENSMUSG00000028337	NonProperStrand	24	chr15	100311922	100311938	protein_coding	Csrnp2	utr3	ENSMUSG00000044636	NonProperStrand	60	1	-15.1651
chr6	149443137	149443176	protein_coding	Bicd1	exon	ENSMUSG00000003452	ProperStrand	5	chr4	141197439	141197459	protein_coding	Plekhm2	intron	ENSMUSG00000028917	NonProperStrand	2	1	-inf
chr6	71896714	71896730	protein_coding	Polr1a	intron	ENSMUSG00000049553	NonProperStrand	25	chr1	162968461	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-7.8269
chr17	25969051	25969131	protein_coding	Stub1	exon	ENSMUSG00000039615	ProperStrand	24	chr10	23505152	23505214	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.6868
chr15	102334724	102334792	protein_coding	Map3k12	intron	ENSMUSG00000023050	ProperStrand	5	chr4	131865893	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-6.5022
chr2	25105896	25107254	protein_coding	Ndor1	exon	ENSMUSG00000006471	NonProperStrand	84	chr5	121655126	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.1314
chr11	76594825	76594842	protein_coding	Cpd	utr3	ENSMUSG00000020841	NonProperStrand	4	chr4	131908699	131908734	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-6.2660
chr7	11311316	11314911	protein_coding	Nlrp4b	exon	ENSMUSG00000034087	ProperStrand	14	chr14	76247753	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-7.0446
chr11	78737685	78737704	protein_coding	Nos2	intron	ENSMUSG00000020826	ProperStrand	1	chr16	23110856	23110909	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr6	34306301	34306317	protein_coding	Akr1b8	exon	ENSMUSG00000029762	NonProperStrand	1	chr7	52650040	52650062	protein_coding	Snrnp70	exon	ENSMUSG00000063511	ProperStrand	61	1	-inf
chr11	9028543	9028633	protein_coding	Upp1	intron	ENSMUSG00000020407	NonProperStrand	1	chr19	8963096	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-inf
chr19	9042728	9051970	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	chr11	69483168	69483278	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	4	-1.4075
chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	chr9	15119631	15119969	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-1.5669
chr12	66200433	66202587	protein_coding	Fancm	utr5	ENSMUSG00000055884	ProperStrand	16	chr4	131865855	131865945	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.1079
chrX	99383291	99383672	protein_coding	Rps4x	exon	ENSMUSG00000031320	ProperStrand	139	chr4	56910544	56910624	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-4.4768
chr14	105363667	105363684	LTR	RMER17D2	ERVK	chr14RMER17D2105363569	ProperStrand	8	chr10	107792223	107792243	protein_coding	Pawr	intron	ENSMUSG00000035873	ProperStrand	39	1	-17.6405
chr6	51415202	51416158	protein_coding	Hnrnpa2b1	exon	ENSMUSG00000004980	ProperStrand	166	chr14	77424372	77424388	protein_coding	9030625A04Rik	utr3	ENSMUSG00000044350	NonProperStrand	152	1	-9.4073
chr11	58682398	58682415	protein_coding	2810021J22Rik	utr5	ENSMUSG00000020491	ProperStrand	162	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-7.3872
chr2	90235294	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr12	3968611	3968627	protein_coding	Efr3b	exon	ENSMUSG00000020658	ProperStrand	142	1	-2.8737
chr3	156224612	156224628	lincRNA	4930570G19Rik	exon	ENSMUSG00000085084	ProperStrand	326	chr2	130102052	130102104	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-2.2486
chr11	6519810	6519911	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	chr5	130295413	130295527	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	2	-1.5647
chr7	57041565	57041581	protein_coding	Prmt3	exon	ENSMUSG00000030505	ProperStrand	89	chr9	15119631	15119680	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.9712
chr7	91031860	91031879	protein_coding	Mesdc1	utr5	ENSMUSG00000070462	ProperStrand	19	chr11	69483191	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.5692
chr7	26515876	26515898	protein_coding	Hnrnpul1	intron	ENSMUSG00000040725	ProperStrand	84	chr13	59832611	59832628	protein_coding	4932411G14Rik	intron	ENSMUSG00000043986	ProperStrand	1	1	-inf
chr13	51743567	51743662	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	chr1	162966853	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	3	-2.5141
chr5	128131122	128137457	protein_coding	Glt1d1	exon	ENSMUSG00000049971	ProperStrand	13	chr7	150717298	150717348	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	3	-19.9968
chr7	148449159	148449259	protein_coding	Irf7	exon	ENSMUSG00000025498	ProperStrand	13	chr16	23110890	23110991	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	12	-20.0185
chr17	57161176	57161218	protein_coding	Khsrp	utr3	ENSMUSG00000007670	ProperStrand	353	chr1	162965999	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-0.8134
chr8	74008400	74008417	protein_coding	Ano8	exon	ENSMUSG00000034863	NonProperStrand	171	chr2	91737970	91738071	protein_coding	Ambra1	intron	ENSMUSG00000040506	ProperStrand	65	2	-17.3838
chr2	130103754	130103825	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	chr8	73419703	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	8	-4.2667
chr15	97811251	97811267	protein_coding	Col2a1	exon	ENSMUSG00000022483	ProperStrand	34	chr4	120539527	120539556	protein_coding	Rims3	intron	ENSMUSG00000032890	ProperStrand	18	1	-16.7811
chr13	73950436	73950454	protein_coding	Slc12a7	intron	ENSMUSG00000017756	NonProperStrand	5	chr7	150717298	150717425	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	2	-17.0493
chr13	55105923	55105939	protein_coding	Unc5a	exon	ENSMUSG00000025876	NonProperStrand	96	chr12	17552967	17553048	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-4.1888
chr12	110787716	110787782	lincRNA	Meg3	intron	ENSMUSG00000021268	ProperStrand	61	chr5	135884630	135884646	protein_coding	Hip1	utr3	ENSMUSG00000039959	NonProperStrand	23	1	-15.1916
chr7	35989836	35991062	protein_coding	Lrp3	exon	ENSMUSG00000001802	ProperStrand	17	chr16	44013139	44016205	protein_coding	Gramd1c	utr5	ENSMUSG00000036292	NonProperStrand	1	1	-inf
chr8	111457814	111457904	protein_coding	Zfhx3	exon	ENSMUSG00000038872	ProperStrand	65	chr4	131865866	131865946	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.6453
chr10	90559862	90559909	protein_coding	Ikbip	utr3	ENSMUSG00000019975	ProperStrand	12	chr15	51796582	51798172	protein_coding	Rad21	exon	ENSMUSG00000022314	ProperStrand	85	1	-15.8742
chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	chr2	26493363	26493483	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-4.0893
chr5	130924898	130924915	protein_coding	Caln1	utr5	ENSMUSG00000060371	ProperStrand	32	chr11	106362639	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-8.6656
chr13	88569462	88569482	LTR	RMER6D	ERVK	chr13RMER6D88569354	ProperStrand	42	chr4	131866608	131866675	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	1	-9.8227
chr8	11618857	11618880	protein_coding	Ankrd10	intron	ENSMUSG00000031508	ProperStrand	32	chr9	120038552	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.2048
chr4	94422008	94422028	protein_coding	Tek	intron	ENSMUSG00000006386	NonProperStrand	7	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-13.0159
chr9	96264584	96264712	protein_coding	Atp1b3	utr5	ENSMUSG00000032412	ProperStrand	20	chr18	35714262	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-5.5524
chr4	97279558	97279576	protein_coding	E130114P18Rik	intron	ENSMUSG00000048747	ProperStrand	5	chr17	24857708	24857831	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	NonProperStrand	27	1	-19.2031
chr11	113427022	113427064	protein_coding	Slc39a11	utr5	ENSMUSG00000041654	ProperStrand	25	chr9	39358287	39358304	protein_coding	Olfr958	exon	ENSMUSG00000050853	NonProperStrand	266	1	-12.0997
chr13	98264510	98264610	lincRNA	Gm11019	exon	ENSMUSG00000078952	ProperStrand	113	chr7	150717298	150717333	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-4.2873
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr13	54626067	54626084	protein_coding	4732471D19Rik	exon	ENSMUSG00000043183	NonProperStrand	18	2	-17.2981
chr6	143704410	143704427	SINE	ID_B1	B4	chr6ID_B1143704348	NonProperStrand	8	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-13.0631
chr2	26493428	26493518	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr14	52700898	52700957	protein_coding	Hnrnpc	intron	ENSMUSG00000060373	ProperStrand	75	1	-5.7558
chr8	24367267	24367496	protein_coding	Golga7	utr5	ENSMUSG00000015341	ProperStrand	36	chr12	119301895	119301912	protein_coding	Dnahc11	intron	ENSMUSG00000018581	ProperStrand	65	1	-14.1857
chr13	6647920	6647957	protein_coding	Pfkp	utr5	ENSMUSG00000021196	NonProperStrand	2	chr1	155287314	155287355	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	1	-16.4302
chr1	191695732	191695822	protein_coding	Ptpn14	utr3	ENSMUSG00000026604	ProperStrand	74	chr14	76247714	76247794	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-3.7782
chr8	24050734	24050802	protein_coding	Myst3	exon	ENSMUSG00000031540	ProperStrand	111	chr18	73693169	73693188	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	2	-7.2304
chr1	134966187	134966294	protein_coding	Pik3c2b	intron	ENSMUSG00000026447	ProperStrand	24	chr12	17552949	17552995	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	4	-19.7560
chr3	35725890	35725907	protein_coding	Atp11b	exon	ENSMUSG00000037400	NonProperStrand	18	chr6	120467088	120468467	protein_coding	Cecr5	exon	ENSMUSG00000058979	ProperStrand	97	1	-14.8000
chr5	66760807	66760824	protein_coding	Apbb2	intron	ENSMUSG00000029207	ProperStrand	25	chr19	8798484	8798516	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-6.9443
chr17	28314221	28314266	protein_coding-noncoding	Zfp523	utr5	ENSMUSG00000024220	ProperStrand	1	chr8	93594201	93594217	protein_coding	Rbl2	exon	ENSMUSG00000031666	ProperStrand	7	1	-inf
chr15	76442932	76442966	protein_coding	Slc39a4	utr3	ENSMUSG00000063354	ProperStrand	35	chr16	23110941	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-4.3005
chr11	69037669	69037685	protein_coding	Gucy2e	exon	ENSMUSG00000020890	NonProperStrand	99	chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	2	-8.9506
chr10	79316213	79316230	lincRNA	E130317F20Rik	exon	ENSMUSG00000091994	NonProperStrand	97	chr19	8963027	8963127	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	9	-17.7367
chr14	21167107	21167207	protein_coding	Ecd	utr5	ENSMUSG00000021810	ProperStrand	22	chr8	13416897	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-8.4663
chr13	69071252	69071269	protein_coding	Adcy2	intron	ENSMUSG00000021536	ProperStrand	237	chrX	84483702	84483720	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-5.5344
chr9	108108809	108108911	protein_coding	Dag1	utr3	ENSMUSG00000039952	ProperStrand	54	chr1	90123798	90124639	protein_coding	Heatr7b1	utr5	ENSMUSG00000079429	ProperStrand	147	1	-11.7273
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr19	58929372	58929389	protein_coding	Hspa12a	intron	ENSMUSG00000025092	NonProperStrand	17	1	-11.2733
chr11	83941662	83941754	protein_coding	Tada2a	intron	ENSMUSG00000018651	ProperStrand	32	chr9	22177620	22177687	protein_coding	Anln	exon	ENSMUSG00000036777	ProperStrand	133	1	-12.9860
chr9	114383074	114383135	protein_coding	Glb1	exon	ENSMUSG00000045594	ProperStrand	67	chr11	69481344	69481434	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	5	-13.2861
chr1	181027187	181027205	protein_coding	Smyd3	intron	ENSMUSG00000055067	ProperStrand	231	chr17	35088955	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-3.3046
chr9	64984252	64984342	protein_coding	Igdcc4	utr3	ENSMUSG00000032816	ProperStrand	29	chr17	13115665	13115745	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	2	-14.2919
chr10	127556863	127556901	protein_coding	Baz2a	exon	ENSMUSG00000040054	ProperStrand	274	chr2	145076803	145209252	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-4.7441
chr17	32352699	32352784	protein_coding	Brd4	intron	ENSMUSG00000024002	ProperStrand	121	chr13	49779667	49779757	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-5.6313
chr3	98117271	98118312	protein_coding	Phgdh	exon	ENSMUSG00000053398	ProperStrand	46	chr5	130300442	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	4	-10.3608
chr4	95486537	95486627	protein_coding	Fggy	intron	ENSMUSG00000028573	ProperStrand	44	chr12	80485423	80485497	protein_coding	Rad51l1	intron	ENSMUSG00000059060	ProperStrand	26	3	-20.6807
chr9	21817527	21817584	protein_coding	Prkcsh	exon	ENSMUSG00000003402	ProperStrand	58	chr17	24857725	24857815	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.3538
chr18	9315028	9315107	protein_coding	Ccny	utr3	ENSMUSG00000024286	ProperStrand	23	chr16	23111392	23111450	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.7951
chr17	26766594	26771421	protein_coding	Ergic1	exon	ENSMUSG00000001576	ProperStrand	114	chr5	121655017	121655097	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.5937
chr1	136514374	136514391	protein_coding	Kdm5b	utr5	ENSMUSG00000042207	NonProperStrand	3	chr12	106269467	106269557	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-10.4002
chr3	157675310	157675410	protein_coding	Srsf11	exon	ENSMUSG00000055436	ProperStrand	46	chr18	35714238	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-3.9369
chr3	95127317	95127360	protein_coding	Lass2	utr3	ENSMUSG00000015714	NonProperStrand	2	chr7	52560178	52560194	protein_coding	Trpm4	utr3	ENSMUSG00000038260	ProperStrand	161	1	-19.2940
chr17	34255739	34255770	protein_coding	Brd2	utr5	ENSMUSG00000024335	ProperStrand	69	chr19	23288649	23289139	protein_coding	Smc5	exon	ENSMUSG00000024943	ProperStrand	146	1	-11.2474
chr3	45780646	45780665	LINE	Lx2B	L1	chr3Lx2B45780445	ProperStrand	34	chr5	151755614	151755632	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-8.8799
chr4	59925413	59925431	protein_coding	Slc46a2	intron	ENSMUSG00000028386	ProperStrand	7	chr7	52713914	52713949	protein_coding	Ftl1	exon	ENSMUSG00000050708	ProperStrand	807	1	-12.5368
chr4	131908433	131908465	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr17	24300045	24300061	protein_coding	Amdhd2	exon	ENSMUSG00000036820	ProperStrand	11	1	-10.7098
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr15	81937523	81937539	protein_coding	Mei1	exon	ENSMUSG00000068117	ProperStrand	53	1	-8.8419
chr10	79880095	79883872	protein_coding	Tcf3	exon	ENSMUSG00000020167	ProperStrand	73	chr4	131908236	131908440	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	10	-17.7994
chr14	35225594	35225611	protein_coding	Bmpr1a	utr3	ENSMUSG00000021796	ProperStrand	21	chr1	93263062	93263079	protein_coding	Fam132b	exon	ENSMUSG00000047443	NonProperStrand	98	1	-14.4571
chr17	75008984	75009054	protein_coding	Birc6	exon	ENSMUSG00000024073	ProperStrand	110	chr4	122970419	122970519	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-6.2144
chr4	155550812	155550897	protein_coding	Agrn	exon	ENSMUSG00000041936	ProperStrand	175	chr7	116663715	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-0.9155
chr16	26504951	26504967	protein_coding	Tmem207	exon	ENSMUSG00000091972	NonProperStrand	34	chr18	35714188	35714239	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.5127
mmu-miR-6240	4	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr14	31953025	31953118	protein_coding	Stab1	exon	ENSMUSG00000042286	NonProperStrand	127	1	-4.4513
chrX	138777856	138777883	protein_coding	Acsl4	exon	ENSMUSG00000031278	ProperStrand	31	chr1	162965531	162965574	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.5161
chr6	131330313	131330424	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	ProperStrand	408	chr7	116664806	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	9	-6.5346
chr11	69483136	69483237	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	chr11	68853899	68853959	tRNA	tRNA396-ProCGG	.	1370723	ProperStrand	48	2	-4.9433
chr7	71537026	71537116	protein_coding	Mphosph10	utr5	ENSMUSG00000030521	ProperStrand	6	chr4	131908814	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.3738
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr18	35399158	35403622	protein_coding	Ctnna1	exon	ENSMUSG00000037815	ProperStrand	115	1	-7.6054
chr3	144748059	144749264	protein_coding	Clca5	exon	ENSMUSG00000036960	ProperStrand	86	chr5	121655101	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.0891
chr5	42136455	42136473	Low_complexity	GA-rich	Low_complexity	chr5GA-rich42136449	NonProperStrand	106	chrX	12717665	12718915	protein_coding	Usp9x	exon	ENSMUSG00000031010	ProperStrand	174	1	-10.0343
chr5	31838511	31846250	protein_coding	Slc4a1ap	exon	ENSMUSG00000029141	ProperStrand	9	chr16	23110530	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	4	-18.7912
chr5	100855926	100855974	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr5	121655016	121655106	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	9	-1.9597
chr6	124885864	124885927	protein_coding	Mlf2	utr3	ENSMUSG00000030120	ProperStrand	80	chr2	26494708	26494808	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.5997
chr13	58294721	58294756	protein_coding	Ubqln1	exon	ENSMUSG00000005312	ProperStrand	49	chr2	4829164	4829180	protein_coding	Sephs1	utr3	ENSMUSG00000026662	NonProperStrand	271	2	-16.8981
chr17	24856729	24856793	antisense	Snhg9	.	ENSMUSG00000090101	ProperStrand	218	chr11	62418059	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-3.1220
chr18	78271217	78271236	LTR	MTD	MaLR	chr18MTD78271213	NonProperStrand	1	chr11	95910155	95910194	protein_coding	Ube2z	utr3	ENSMUSG00000014349	ProperStrand	41	1	-inf
chr18	5682938	5682960	protein_coding	Zeb1	intron	ENSMUSG00000024238	NonProperStrand	2	chr19	19053513	19053530	protein_coding	Rorb	intron	ENSMUSG00000036192	NonProperStrand	6	1	-inf
chr10	80785490	80785506	protein_coding	2510012J08Rik	exon	ENSMUSG00000034889	ProperStrand	16	chr15	79913322	79913343	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-6.1593
chr7	31228118	31228218	protein_coding	Aplp1	exon	ENSMUSG00000006651	ProperStrand	29	chr9	15119722	15119769	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.9539
chr12	110785472	110785564	lincRNA	Meg3	intron	ENSMUSG00000021268	ProperStrand	61	chr4	134024315	134026029	protein_coding	Stmn1	utr5	ENSMUSG00000028832	ProperStrand	54	1	-13.4942
chr5	147922525	147922616	protein_coding	Polr1d	utr3	ENSMUSG00000029642	ProperStrand	23	chr11	69481335	69481417	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	10	-20.2643
chr14	17288472	17288490	protein_coding	Rarb	intron	ENSMUSG00000017491	ProperStrand	6	chr9	39882020	39882036	protein_coding	Olfr982	exon	ENSMUSG00000049010	NonProperStrand	35	1	-18.4856
chr9	21823257	21823273	protein_coding	Elavl3	exon	ENSMUSG00000003410	NonProperStrand	137	chr8	73419712	73419775	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-1.7404
chr10	127790259	127795477	protein_coding	Cs	exon	ENSMUSG00000005683	ProperStrand	63	chr4	131908236	131908295	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-2.5707
chr14	106292527	106292573	protein_coding	Spry2	exon	ENSMUSG00000022114	ProperStrand	22	chr11	67167096	67167112	protein_coding	Myh13	exon	ENSMUSG00000060180	ProperStrand	145	1	-13.5756
chr3	152450610	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	chr15	98662646	98662746	protein_coding	Mll2	utr3	ENSMUSG00000048154	ProperStrand	170	1	-6.7320
chr9	15130917	15130988	snoRNA	ENSMUSG00000077394_snoU2_19	.	ENSMUSG00000077394	ProperStrand	96	chr5	108336392	108336431	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-6.6953
chr17	26332129	26332229	protein_coding	Axin1	utr3	ENSMUSG00000024182	ProperStrand	28	chr10	23505151	23505209	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.4185
chr3	30942732	30945402	protein_coding	Prkci	exon	ENSMUSG00000037643	ProperStrand	39	chrX	34622906	34622968	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-3.9678
chr1	133878973	133878989	protein_coding	Slc45a3	utr3	ENSMUSG00000026435	ProperStrand	8	chr17	86567781	86567798	protein_coding	Prkce	utr5	ENSMUSG00000045038	ProperStrand	19	1	-18.7527
chr6	6063973	6064265	protein_coding	Slc25a13	exon	ENSMUSG00000015112	ProperStrand	78	chr19	8963097	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	4	-7.2092
chr14	55269610	55269710	protein_coding	Acin1	intron	ENSMUSG00000022185	ProperStrand	67	chr7	116664848	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.3609
chr1	3661500	3661517	protein_coding	Xkr4	utr5	ENSMUSG00000051951	ProperStrand	59	chr5	108336363	108336409	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-4.9134
chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	chr4	121870881	122132508	pseudogene	Gm12896	.	ENSMUSG00000083558	NonProperStrand	19	2	-17.7311
chr18	16933117	16966848	protein_coding	Cdh2	exon	ENSMUSG00000024304	ProperStrand	71	chrX	120217487	120217504	protein_coding	3110007F17Rik	intron	ENSMUSG00000079450	NonProperStrand	18	1	-15.4026
chr8	87541985	87542043	protein_coding	Asna1	utr3	ENSMUSG00000052456	ProperStrand	25	chr17	71990939	71990999	snoRNA	ENSMUSG00000092713_CT010429.1	.	ENSMUSG00000092713	ProperStrand	182	1	-12.8609
chr5	145890697	145891137	protein_coding	Pdap1	utr3	ENSMUSG00000029623	ProperStrand	112	chr18	35716760	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	11	-19.9657
chr7	116663634	116663743	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	chr12	110874223	110874292	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	4	-2.2352
chr11	80206601	80206659	protein_coding	Zfp207	exon	ENSMUSG00000017421	ProperStrand	21	chr9	120038564	120038654	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	6	-20.4607
chr3	121160737	121160837	protein_coding	Cnn3	utr3	ENSMUSG00000053931	ProperStrand	77	chr5	130300509	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-3.7648
chr9	65675285	65675375	protein_coding	Zfp609	utr5	ENSMUSG00000040524	ProperStrand	87	chr9	15119645	15119725	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	10	-19.2873
chr19	6053063	6053124	protein_coding	Syvn1	utr3	ENSMUSG00000024807	ProperStrand	6	chr18	35714256	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-8.0481
chr12	56511221	56513223	protein_coding	Psma6	exon	ENSMUSG00000021024	ProperStrand	13	chr1	185857228	185857244	protein_coding	1700056E22Rik	exon	ENSMUSG00000044854	ProperStrand	173	1	-14.3071
chr11	108783076	108783093	protein_coding	Axin2	utr5	ENSMUSG00000000142	NonProperStrand	81	chr18	9213301	9213320	protein_coding	Fzd8	exon	ENSMUSG00000036904	ProperStrand	3	1	-18.9896
chr5	74489218	74489261	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr2	30888488	30888508	protein_coding	Fnbp1	utr3	ENSMUSG00000075415	ProperStrand	53	1	-5.8654
chr15	84172736	84172752	protein_coding	Parvg	utr3	ENSMUSG00000022439	ProperStrand	3	chr11	6428107	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-9.3720
chr2	63936035	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr10	127521199	127521270	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	3	-8.6386
chr5	37187722	37187831	protein_coding	Mrfap1	exon	ENSMUSG00000055302	ProperStrand	62	chr8	129469505	129469552	protein_coding	Tomm20	exon	ENSMUSG00000058779	ProperStrand	55	1	-13.4253
chr19	10974863	10975229	protein_coding	Prpf19	exon	ENSMUSG00000024735	ProperStrand	75	chr1	72871522	72895733	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	1	-9.0363
chr18	4097556	4097575	LINE	L3	CR1	chr18L34097561	ProperStrand	1	chr5	117733115	117733176	protein_coding	Pebp1	utr3	ENSMUSG00000032959	ProperStrand	54	1	-inf
chr7	4691730	4691754	protein_coding	Suv420h2	utr5	ENSMUSG00000059851	NonProperStrand	70	chr5	74489546	74489676	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	12	-21.1808
chr8	87577551	87577568	protein_coding	Tnpo2	intron	ENSMUSG00000031691	ProperStrand	92	chrX	71517821	71517906	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-5.7042
chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	NonProperStrand	91	chr9	120037994	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	NonProperStrand	19	1	-14.8048
chr13	36819348	36819365	protein_coding	Nrn1	intron	ENSMUSG00000039114	ProperStrand	15	chr16	23110843	23110889	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.0842
chr4	131865868	131865968	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	NonProperStrand	39	chr1	89673713	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	NonProperStrand	27	1	-15.7826
chr3	148489471	148489494	protein_coding	Lphn2	exon	ENSMUSG00000028184	ProperStrand	20	chr11	97642952	97643006	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.4938
chr5	144785353	144785370	protein_coding	Ocm	exon	ENSMUSG00000029618	ProperStrand	1	chr16	23110827	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr1	173189047	173189137	protein_coding	Adamts4	exon	ENSMUSG00000006403	ProperStrand	9	chr10	23505197	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	8	-21.0833
chr6	56820677	56820781	protein_coding	Fkbp9	intron	ENSMUSG00000029781	ProperStrand	39	chr7	89854350	89854366	protein_coding	Eftud1	intron	ENSMUSG00000038563	ProperStrand	12	1	-17.3420
chr1	72871503	72895695	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	chr13	49779747	49779805	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	3	-8.3298
chr9	72368533	72368550	lincRNA	4930509E16Rik	intron	ENSMUSG00000087091	ProperStrand	10	chr16	23110964	23110983	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.7978
chr11	68806430	68806456	protein_coding	Pfas	exon	ENSMUSG00000020899	ProperStrand	53	chr1	88252837	88252885	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	2	-11.0995
chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr2	92826015	92826060	protein_coding	Prdm11	utr3	ENSMUSG00000075028	ProperStrand	6	3	-18.5709
chr17	83873086	83876557	protein_coding	Eml4	exon	ENSMUSG00000032624	ProperStrand	50	chr8	73032385	73033253	protein_coding	2810422J05Rik	exon	ENSMUSG00000055553	ProperStrand	171	1	-11.5789
chr19	26785161	26790606	protein_coding	Smarca2	exon	ENSMUSG00000024921	ProperStrand	38	chr17	39985147	39985246	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-6.8372
chr8	26684319	26684403	protein_coding	Fgfr1	utr3	ENSMUSG00000031565	ProperStrand	10	chr15	34370545	34370603	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-7.0767
chr6	145564547	145564563	protein_coding	Tuba3b	utr5	ENSMUSG00000067338	ProperStrand	152	chr11	106362635	106362694	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	2	-9.0977
chr9	57475879	57475999	protein_coding	Csk	exon	ENSMUSG00000032312	NonProperStrand	1	chr4	131908809	131908896	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-inf
chr8	86555064	86555080	protein_coding	Il27ra	exon	ENSMUSG00000005465	NonProperStrand	2	chr4	155022603	155022632	protein_coding	Cdk11b	exon	ENSMUSG00000029062	ProperStrand	92	1	-inf
chr8	91556547	91556627	protein_coding	Sall1	exon	ENSMUSG00000031665	ProperStrand	96	chr4	131908351	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-1.6544
chr4	133157207	133157268	protein_coding	Sfn	exon	ENSMUSG00000047281	ProperStrand	7	chr9	15118332	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-7.7405
chr18	36957577	36957667	protein_coding	Zmat2	exon	ENSMUSG00000001383	ProperStrand	25	chr18	35714194	35714274	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-5.1110
chr14	48330537	48330567	protein_coding	Ktn1	exon	ENSMUSG00000021843	ProperStrand	64	chr11	6519810	6519910	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-7.8137
chr7	52135340	52135395	protein_coding	Med25	exon	ENSMUSG00000002968	ProperStrand	33	chr7	116663634	116663737	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.5837
chr11	7067186	7069426	protein_coding	Adcy1	exon	ENSMUSG00000020431	ProperStrand	183	chr3	85942713	85942781	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	1	-7.4918
chr8	107853979	107854069	protein_coding	Tmem208	intron	ENSMUSG00000014856	ProperStrand	4	chr6	85237138	85237218	protein_coding	Sfxn5	intron	ENSMUSG00000033720	NonProperStrand	10	1	-19.3291
chr7	117189847	117189908	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr4	53873613	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	1	-2.2452
chr12	92811908	92812014	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	chr4	116828379	116828424	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	3	-9.2121
chr10	80640934	80640976	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr14	55476645	55476661	protein_coding	Homez	exon	ENSMUSG00000057156	NonProperStrand	127	1	-4.6414
chr1	88013211	88013246	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	chr13	34436854	34436870	protein_coding	Slc22a23	utr5	ENSMUSG00000038267	ProperStrand	95	1	-7.5869
chr4	134893781	134893885	protein_coding	Srrm1	exon	ENSMUSG00000028809	ProperStrand	142	chr6	24903862	24903878	protein_coding	Tmem229a	utr3	ENSMUSG00000048022	ProperStrand	1	1	-inf
chr5	138227385	138227475	protein_coding	Mepce	utr5	ENSMUSG00000029726	ProperStrand	18	chr9	78327895	78328067	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-8.7540
chr3	142492181	142493463	protein_coding	Pkn2	exon	ENSMUSG00000004591	ProperStrand	28	chr15	5068442	5068480	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	4	-20.3485
chr7	74189892	74189909	protein_coding	Adamts17	intron	ENSMUSG00000058145	NonProperStrand	73	chr19	8963023	8963123	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-3.5465
chr13	97050603	97050620	SINE	B4A	B4	chr13B4A97050317	ProperStrand	12	chr3	89869464	89869514	protein_coding	1700094D03Rik	exon	ENSMUSG00000078667	ProperStrand	7	1	-22.6201
chr1	102076758	102076794	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	chr10	127521219	127521271	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	8	-inf
chr3	136584871	136591510	protein_coding	Ppp3ca	exon	ENSMUSG00000028161	ProperStrand	45	chr4	131866155	131866245	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	6	-19.2206
chr7	29162882	29162954	protein_coding	Zfp36	exon	ENSMUSG00000044786	NonProperStrand	3	chr11	62416634	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-11.4760
chr17	32083559	32083639	protein_coding	Hsf2bp	exon	ENSMUSG00000002076	ProperStrand	17	chr14	78120817	78120907	protein_coding	Enox1	utr3	ENSMUSG00000022012	ProperStrand	16	5	-inf
chr19	6321869	6322107	protein_coding	Cdc42bpg	exon	ENSMUSG00000024769	ProperStrand	90	chr18	73693166	73693187	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	2	-7.8418
chr18	24773665	24796984	protein_coding	Elp2	exon	ENSMUSG00000024271	ProperStrand	46	chr16	23110833	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-4.5127
chr8	129461012	129461051	protein_coding	Tomm20	exon	ENSMUSG00000058779	ProperStrand	55	chr19	8799607	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-6.9395
chr14	60292696	60292713	protein_coding	Atp8a2	intron	ENSMUSG00000021983	NonProperStrand	23	chr4	116828379	116828452	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-10.3187
chr7	117189865	117189943	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr2	166890525	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	3	-3.4842
chr16	23110867	23110947	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	NonProperStrand	93	chr12	106269338	106269428	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	NonProperStrand	38	2	-20.0462
chr7	4691730	4691754	protein_coding	Suv420h2	utr5	ENSMUSG00000059851	NonProperStrand	70	chr18	35714217	35714290	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	3	-8.0036
chr5	135097339	135097429	protein_coding	Eif4h	utr3	ENSMUSG00000040731	ProperStrand	46	chr10	23505166	23505246	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.6154
chr10	80610851	80610912	protein_coding	Zbtb7a	exon	ENSMUSG00000035011	ProperStrand	39	chr7	52381973	52381996	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	2	-12.1403
chr10	119659165	119661699	protein_coding	Tmbim4	exon	ENSMUSG00000020225	ProperStrand	11	chr2	158185529	158185568	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	3	-19.6046
chr7	54109369	54109459	protein_coding	Ldha	exon	ENSMUSG00000063229	ProperStrand	280	chr5	121655099	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-1.1980
chr3	88359162	88359199	protein_coding	Ubqln4	intron	ENSMUSG00000008604	ProperStrand	49	chr7	150482078	150482118	protein_coding	Kcnq1	intron	ENSMUSG00000009545	NonProperStrand	133	2	-19.2589
chr16	48311812	48314000	protein_coding	Dppa2	exon	ENSMUSG00000072419	ProperStrand	9	chr12	106269284	106269403	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-7.9279
chr1	14745034	14745121	protein_coding	Msc	intron	ENSMUSG00000025930	ProperStrand	1	chr7	29136534	29136624	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-inf
chr15	79134815	79134834	protein_coding	Pla2g6	exon	ENSMUSG00000042632	ProperStrand	32	chr16	23110932	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-3.1962
chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr4	122968690	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	12	-6.3662
chr1	190813706	190813733	protein_coding	Kctd3	intron	ENSMUSG00000026608	ProperStrand	28	chr1	162965533	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.7132
chr7	29194997	29195044	protein_coding	Samd4b	intron	ENSMUSG00000037513	ProperStrand	72	chr1	162965555	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.9484
chr17	35089181	35089200	processed_transcript	1110038B12Rik	.	ENSMUSG00000092203	ProperStrand	126	chr16	23110454	23110522	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-2.4854
chr10	40403276	40403293	protein_coding	9030224M15Rik	exon	ENSMUSG00000045555	ProperStrand	2	chr16	23110876	23110910	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr15	98761926	98762337	protein_coding	Tuba1b	exon	ENSMUSG00000023004	ProperStrand	32	chr16	23111384	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-3.9978
chr11	57861637	57863277	protein_coding	Larp1	exon	ENSMUSG00000037331	ProperStrand	201	chr16	96391544	96391624	protein_coding	Lca5l	intron	ENSMUSG00000045275	NonProperStrand	210	1	-8.3811
chr11	88706305	88706395	protein_coding	Akap1	exon	ENSMUSG00000018428	ProperStrand	45	chr15	82725599	82725637	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	1	-9.1000
chr18	60937530	60938088	protein_coding	Rps14	exon	ENSMUSG00000024608	ProperStrand	154	chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-5.8753
chr13	38592737	38592794	protein_coding	Txndc5	utr3	ENSMUSG00000038991	ProperStrand	48	chr11	69483136	69483211	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.8373
chr10	80784150	80784190	protein_coding	2510012J08Rik	exon	ENSMUSG00000034889	ProperStrand	16	chr1	162966010	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-6.1711
chr11	77831660	77831689	protein_coding	Phf12	exon	ENSMUSG00000037791	ProperStrand	21	chr12	106269332	106269422	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-6.1898
chr2	59572160	59645699	protein_coding	Tanc1	intron	ENSMUSG00000035168	ProperStrand	80	chrX	34622930	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-4.6580
chr6	119376468	119376488	LINE	Lx9	L1	chr6Lx9119375949	NonProperStrand	3	chr9	120038589	120038672	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-9.2011
chr4	116827408	116827668	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	chr10	110918675	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-1.0719
chr6	47738069	47738103	misc_RNA	Y_RNA	.	ENSMUSG00000065701	ProperStrand	129	chr6	122266493	122266594	protein_coding	M6pr	utr3	ENSMUSG00000007458	ProperStrand	56	1	-11.9157
chr11	70542514	70542614	protein_coding	Kif1c	utr3	ENSMUSG00000020821	ProperStrand	26	chr16	23110981	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.2392
chr2	167267220	167267320	protein_coding	Slc9a8	intron	ENSMUSG00000039463	ProperStrand	26	chr11	69483136	69483189	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.9646
chr17	35651423	35651475	protein_coding	Tcf19	exon	ENSMUSG00000050410	NonProperStrand	17	chr17	24857716	24857806	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	14	-19.3704
chr2	166843246	166843341	protein_coding	Ddx27	utr5	ENSMUSG00000017999	ProperStrand	55	chr18	35716818	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.3144
chr4	87677802	87677820	protein_coding	Mllt3	intron	ENSMUSG00000028496	NonProperStrand	10	chr1	88247768	88247854	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-8.7050
chr10	95026614	95026670	protein_coding	Nudt4	utr5	ENSMUSG00000020029	ProperStrand	32	chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	1	-10.6655
chr2	163879733	163879749	protein_coding	Tomm34	utr3	ENSMUSG00000018322	NonProperStrand	18	chr19	8963155	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.4763
chr1	163173705	163173736	protein_coding	Prdx6	exon	ENSMUSG00000026701	ProperStrand	23	chr16	23110845	23110935	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.4133
chr17	46658280	46658297	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr11	86509176	86510806	protein_coding	Cltc	exon	ENSMUSG00000047126	ProperStrand	319	1	-5.9158
chr4	136129024	136129973	protein_coding	Kdm1a	exon	ENSMUSG00000036940	ProperStrand	83	chr11	68886974	68887035	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	9	-19.2486
chr18	34769569	34770806	protein_coding	Brd8	exon	ENSMUSG00000003778	ProperStrand	27	chr10	23505190	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-6.6517
chr19	8963027	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	chr1	173041610	173041649	tRNA	tRNA710-ValCAC	.	138300	ProperStrand	206	4	-3.2079
chr7	117189882	117190062	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	chr5	121655016	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	43	-1.7310
chr9	59519736	59519772	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr10	63552101	63552119	protein_coding	Lrrtm3	exon	ENSMUSG00000042846	ProperStrand	63	1	-7.0814
chr6	113723225	113723243	protein_coding	Atp2b2	intron	ENSMUSG00000030302	ProperStrand	14	chrX	34622906	34623010	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-9.8128
chr13	44943740	45011869	protein_coding	Jarid2	exon	ENSMUSG00000038518	ProperStrand	372	chr7	116663633	116663767	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-1.0912
chr18	43482613	43482691	protein_coding	Dpysl3	utr3	ENSMUSG00000024501	ProperStrand	9	chr13	14169171	14169195	protein_coding	Arid4b	intron	ENSMUSG00000039219	NonProperStrand	1	1	-inf
mmu-miR-3535	0	26	miRNA	mmu-miR-3535	.	mmu-miR-3535	ProperStrand	15	chr16	23110960	23111010	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.0842
chr15	79913296	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr18	75160711	75160776	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	3	-1.9276
chr7	50968531	50968551	protein_coding	Klk13	intron	ENSMUSG00000054046	ProperStrand	5	chr16	23111766	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-6.6731
chr3	153575090	153575113	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	chr2	158182180	158182279	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-0.9378
chr2	179925946	179926065	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr3	152450607	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	1	-5.2383
chr15	100299084	100299100	lincRNA	5330439K02Rik	exon	ENSMUSG00000092050	NonProperStrand	36	chr5	54389948	54389965	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	1	-11.8132
chrX	71589885	71589904	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr18	75160708	75160776	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	3	-13.8824
chr9	45257967	45257988	protein_coding	Dscaml1	intron	ENSMUSG00000032087	ProperStrand	23	chr19	23239599	23239699	protein_coding	Klf9	utr3	ENSMUSG00000033863	ProperStrand	83	1	-14.5981
chr2	26768386	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	chr2	158182180	158182292	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	16	-8.9421
chr4	138932881	138932919	protein_coding	C230096C10Rik	utr3	ENSMUSG00000078517	ProperStrand	69	chr16	23111754	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-6.7515
chr7	133940417	133940951	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	chr4	131865381	131865460	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	2	-0.7987
chr1	190267301	190267317	protein_coding	Ush2a	exon	ENSMUSG00000026609	NonProperStrand	60	chr19	8798484	8798513	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-5.2115
chr19	10696786	10696886	protein_coding	Ddb1	exon	ENSMUSG00000024740	ProperStrand	304	chr5	111121068	111121142	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-3.3310
chr11	62416573	62416607	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr11	32487369	32488795	protein_coding	Stk10	exon	ENSMUSG00000020272	ProperStrand	11	2	-19.3636
chr8	86090951	86091031	protein_coding-noncoding	Ndufb7	utr5	ENSMUSG00000033938	NonProperStrand	1	chr8	86090622	86090712	protein_coding	Ndufb7	utr5	ENSMUSG00000033938	NonProperStrand	2	1	-inf
chr1	71644294	71672758	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr17	35088956	35089022	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	4	-4.8452
chr1	63225416	63225834	protein_coding	Eef1b2	exon	ENSMUSG00000025967	ProperStrand	106	chr4	46463877	46463893	protein_coding	Anp32b	utr5	ENSMUSG00000028333	NonProperStrand	2	1	-inf
chr11	96133152	96133171	protein_coding	Hoxb9	exon	ENSMUSG00000020875	NonProperStrand	22	chr14	47429215	47429259	protein_coding	Gmfb	utr3	ENSMUSG00000062014	ProperStrand	5	1	-19.2616
chr8	72435648	72435665	protein_coding	Gatad2a	exon	ENSMUSG00000036180	ProperStrand	112	chr4	116827121	116827187	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-5.8087
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr4	117910423	117910470	protein_coding	Ptprf	exon	ENSMUSG00000033295	ProperStrand	337	1	-4.5905
chr9	120039325	120039688	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	chr9	120039536	120039682	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-1.1463
chr14	52816779	52816795	protein_coding	Supt16h	exon	ENSMUSG00000035726	ProperStrand	193	chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	1	-8.2809
chr13	12198715	12198781	protein_coding	Ryr2	utr5	ENSMUSG00000021313	ProperStrand	61	chr9	120037994	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	7	-19.2759
chr12	17281215	17281306	protein_coding	Pdia6	exon	ENSMUSG00000020571	ProperStrand	114	chr10	62228322	62228387	snoRNA	ENSMUSG00000080469_Snord98	.	ENSMUSG00000080469	ProperStrand	124	1	-10.5665
chr1	91358413	91358430	protein_coding	Agap1	intron	ENSMUSG00000055013	ProperStrand	229	chr12	106269284	106269384	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-1.7946
chr9	4796011	4796029	protein_coding	Gria4	utr5	ENSMUSG00000025892	ProperStrand	20	chr1	162965531	162965554	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.3741
chr3	87726985	87727145	protein_coding	Mrpl24	exon	ENSMUSG00000019710	ProperStrand	10	chr16	23110967	23111000	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.7978
chr5	139255436	139255452	protein_coding	Fam20c	intron	ENSMUSG00000025854	NonProperStrand	4	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-11.7931
chr19	44188371	44188451	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr2	144091715	144091805	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	ProperStrand	549	1	-3.5092
chr9	55904036	55904052	protein_coding	Rcn2	exon	ENSMUSG00000032320	ProperStrand	11	chr7	29136525	29136577	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.5623
chr5	116011416	116013326	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	chrX	34622904	34623004	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-1.5662
chr1	162965530	162965550	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr10	127522376	127522416	snoRNA	ENSMUSG00000093245_AC131120.1	.	ENSMUSG00000093245	ProperStrand	77	1	-2.8297
chr7	34992750	34992767	protein_coding	Gpi1	exon	ENSMUSG00000036427	NonProperStrand	40	chr9	108205550	108205568	protein_coding	Tcta	utr3	ENSMUSG00000039461	NonProperStrand	1	1	-inf
chr6	136540812	136540883	protein_coding	Atf7ip	intron	ENSMUSG00000030213	ProperStrand	22	chr7	29136540	29136630	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.1896
chr17	56186531	56186612	protein_coding	Chaf1a	exon	ENSMUSG00000002835	ProperStrand	23	chr7	52713932	52713968	protein_coding	Ftl1	exon	ENSMUSG00000050708	ProperStrand	807	2	-15.8934
chr7	30660342	30660358	protein_coding	Zfp420	exon	ENSMUSG00000058402	NonProperStrand	8	chr7	52382237	52382259	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-12.4159
chr9	110842536	110842576	protein_coding	Tdgf1	utr3	ENSMUSG00000032494	ProperStrand	218	chr11	55296262	55296333	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-3.7023
chr6	122664265	122664300	protein_coding	Nanog	utr3	ENSMUSG00000012396	ProperStrand	66	chr17	24857768	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-3.8414
chr16	37384897	37384913	protein_coding	Stxbp5l	utr5	ENSMUSG00000022829	ProperStrand	332	chr11	77995191	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-2.9437
chr17	23956613	23956694	protein_coding	Srrm2	utr3	ENSMUSG00000039218	ProperStrand	521	chr5	145532297	145532387	protein_coding	Trrap	intron	ENSMUSG00000045482	ProperStrand	399	1	-5.2433
chr14	61375107	61375158	protein_coding	Spata13	exon	ENSMUSG00000021990	ProperStrand	28	chr10	110918636	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	3	-11.6627
chr7	4643962	4643996	protein_coding	Brsk1	utr5	ENSMUSG00000035390	ProperStrand	12	chr7	52894074	52894092	protein_coding	Rasip1	exon	ENSMUSG00000044562	NonProperStrand	2	1	-inf
chr13	52742450	52742466	protein_coding	Syk	utr3	ENSMUSG00000021457	NonProperStrand	125	chr19	8963129	8963165	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.1631
chr10	39978342	39978422	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	chr6	124665300	124665390	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	2	-0.8763
chr5	74489205	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr10	23505543	23506347	protein_coding	Rps12	intron	ENSMUSG00000061983	ProperStrand	309	4	-9.1359
chr11	4987970	4988023	protein_coding	Ewsr1	exon	ENSMUSG00000009079	ProperStrand	248	chr2	24825186	24827046	protein_coding	Wdr85	exon	ENSMUSG00000026975	ProperStrand	323	1	-7.1100
chr7	30074412	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr11	77995189	77995252	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-3.4317
chr7	26596666	26596710	protein_coding	Cyp2s1	exon	ENSMUSG00000040703	ProperStrand	18	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-11.4194
chr12	100017371	100017421	protein_coding	Zc3h14	exon	ENSMUSG00000021012	ProperStrand	27	chr3	88497856	88497946	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-9.0653
chr4	133779127	133779144	protein_coding	Catsper4	intron	ENSMUSG00000048003	ProperStrand	2	chrX	71517821	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	2	-inf
chrX	130496426	130496668	protein_coding	Sytl4	exon	ENSMUSG00000031255	ProperStrand	169	chr11	62418036	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-3.5841
chr9	65239147	65239211	pseudogene	Kbtbd13	.	ENSMUSG00000054978	ProperStrand	2	chr17	24856662	24856752	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-13.8692
chr8	36529522	36529538	protein_coding	Eri1	utr3	ENSMUSG00000031527	NonProperStrand	97	chr19	8798484	8798518	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-4.2887
chr5	135864578	135867498	protein_coding	Pom121	exon	ENSMUSG00000053293	NonProperStrand	94	chr7	118219708	118219740	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-3.3362
chr5	3349654	3349673	protein_coding	Cdk6	intron	ENSMUSG00000040274	NonProperStrand	6	chr18	35716704	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-6.6008
chr11	96680139	96680229	protein_coding	Nfe2l1	utr3	ENSMUSG00000038615	ProperStrand	118	chr17	24857740	24857820	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.2585
chr9	21635602	21635871	protein_coding	Dock6	exon	ENSMUSG00000032198	ProperStrand	155	chr17	13112504	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-2.8278
chrX	20291142	20291203	protein_coding	Usp11	exon	ENSMUSG00000031066	ProperStrand	29	chr14	94184443	94184460	protein_coding	Pcdh9	intron	ENSMUSG00000055421	ProperStrand	59	1	-14.8188
chr11	95821664	95821738	protein_coding	Igf2bp1	utr3	ENSMUSG00000013415	ProperStrand	140	chr14	33005146	33005236	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	4	-8.8885
chr17	23955819	23955838	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-5.9148
chr8	3568023	3568039	protein_coding	C330021F23Rik	utr5	ENSMUSG00000065952	NonProperStrand	85	chr11	62418014	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-4.8807
chr2	180394425	180394441	protein_coding	Dido1	exon	ENSMUSG00000038914	ProperStrand	81	chr11	55296276	55296308	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-5.5908
chr8	4515624	4515704	protein_coding	Lass4	exon	ENSMUSG00000008206	ProperStrand	6	chr15	5068445	5068480	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-10.7955
chr4	82499959	82505413	protein_coding	Zdhhc21	utr5	ENSMUSG00000028403	ProperStrand	5	chr8	98269959	98270049	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-10.6614
chr2	90235299	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	89091564	89092064	protein_coding	Chrnd	exon	ENSMUSG00000026251	ProperStrand	32	1	-5.6851
chr9	20945562	20946456	protein_coding	Cdc37	exon	ENSMUSG00000019471	ProperStrand	97	chr1	93342189	93345290	protein_coding	Per2	exon	ENSMUSG00000055866	ProperStrand	114	1	-11.0590
chr18	73750080	73750270	protein_coding	Mex3c	exon	ENSMUSG00000037253	ProperStrand	17	chr7	117189910	117190063	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	3	-13.5223
chr13	47181330	47181354	protein_coding	Dek	utr3	ENSMUSG00000021377	ProperStrand	36	chr11	69730763	69730949	protein_coding	Eif5a	utr3	ENSMUSG00000078812	ProperStrand	164	2	-20.0467
chr5	122691914	122691930	protein_coding	Hvcn1	utr3	ENSMUSG00000064267	ProperStrand	182	chr5	121655099	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-1.8245
chr3	153575089	153575112	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	chr7	54101250	54103049	protein_coding	Ldha	exon	ENSMUSG00000063229	ProperStrand	280	3	-12.6643
chr2	105012751	105012769	protein_coding	Wt1	utr3	ENSMUSG00000016458	NonProperStrand	338	chr13	21845615	21845686	protein_coding	Hist1h2ak	exon	ENSMUSG00000063021	ProperStrand	30	2	-17.9908
chr2	26493382	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	11	-0.8999
chr16	35825219	35825252	protein_coding	Hspbap1	exon	ENSMUSG00000022849	ProperStrand	48	chr17	35299507	35299562	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-5.2097
chr6	8199532	8199600	LTR	ETnERV2-int	ERVK	chr6ETnERV2-int8199508	NonProperStrand	2	chr15	88974713	88974891	protein_coding	Mapk11	exon	ENSMUSG00000053137	ProperStrand	2	1	-inf
chr16	93690756	93690795	protein_coding	Cbr3	exon	ENSMUSG00000022947	ProperStrand	5	chr4	146958815	146958898	protein_coding	Gm13154	utr3	ENSMUSG00000065999	ProperStrand	4	3	-20.9389
chr4	43505756	43505846	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr11	67466373	67473554	protein_coding	Gas7	exon	ENSMUSG00000033066	ProperStrand	9	1	-6.7740
chr4	56824683	56824705	protein_coding	Ctnnal1	utr3	ENSMUSG00000038816	ProperStrand	18	chr17	35089181	35089231	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-7.8895
chr11	30021804	30021820	protein_coding	Spnb2	intron	ENSMUSG00000020315	ProperStrand	103	chr9	120039533	120039566	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.3688
chr5	115956842	115956858	protein_coding	Pxn	utr5	ENSMUSG00000029528	ProperStrand	171	chr7	52382808	52382832	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-4.7069
chr2	28518006	28518096	protein_coding	Tsc1	exon	ENSMUSG00000026812	ProperStrand	29	chr9	56934417	56934448	protein_coding	Sin3a	utr5	ENSMUSG00000042557	ProperStrand	108	1	-13.6028
chr13	9833563	9833667	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr1	39605591	39605632	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	3	-1.4384
chr9	120039593	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	chr8	113447024	113447079	snoRNA	ENSMUSG00000065100_SNORA57	.	ENSMUSG00000065100	ProperStrand	81	1	-2.7818
chr7	13516162	13516190	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr7	150717298	150717423	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	9	-16.4345
chr2	26203131	26203147	protein_coding	Gpsm1	utr3	ENSMUSG00000026930	ProperStrand	93	chr4	137813143	137813162	protein_coding	Sh2d5	exon	ENSMUSG00000045349	NonProperStrand	31	1	-13.7625
chr14	61398407	61398423	protein_coding	C1qtnf9	exon	ENSMUSG00000071347	ProperStrand	187	chr11	6428060	6428156	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-2.5337
chr5	90718300	90718341	protein_coding	Ankrd17	exon	ENSMUSG00000055204	ProperStrand	77	chr18	35714145	35714235	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	4	-10.3391
chr2	90235296	90235341	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	95405472	95405553	protein_coding	Sept2	utr3	ENSMUSG00000026276	ProperStrand	136	3	-7.5311
chr7	31663114	31664217	protein_coding	Cd22	utr5	ENSMUSG00000030577	NonProperStrand	128	chr19	8963091	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.1318
chr17	4082431	4082511	LINE	L1Md_A	L1	chr17L1Md_A4082095	NonProperStrand	28	chr17	41904751	41904841	LINE	L1Md_A	L1	chr17L1Md_A41904611	NonProperStrand	1	1	-inf
chr5	106242131	106242221	protein_coding	Lrrc8d	exon	ENSMUSG00000046079	ProperStrand	40	chr7	116664819	116664899	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.2687
chr18	33157688	33157705	protein_coding	Camk4	intron	ENSMUSG00000038128	NonProperStrand	42	chr5	54389949	54389966	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	1	-11.5011
chr7	16534823	16534839	protein_coding	Ehd2	utr3	ENSMUSG00000074364	NonProperStrand	197	chr17	24665420	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	2	-4.7675
chr2	180646063	180646167	protein_coding	Ythdf1	exon	ENSMUSG00000038848	ProperStrand	59	chr8	32260335	32260385	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-4.6622
chr10	127553455	127553643	protein_coding	Baz2a	exon	ENSMUSG00000040054	ProperStrand	274	chr1	88252837	88252898	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	2	-6.2684
chr16	64856648	64856706	protein_coding	Cggbp1	utr3	ENSMUSG00000054604	ProperStrand	7	chr15	79908956	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-9.8509
chr4	86339448	86339528	LTR	ORR1A2	MaLR	chr4ORR1A286339368	ProperStrand	1	chr4	86338887	86338977	SINE	B1_Mus1	Alu	chr4B1_Mus186338886	ProperStrand	1	1	-inf
chr2	31467929	31467948	protein_coding	Fubp3	intron	ENSMUSG00000026843	NonProperStrand	2	chr3	123210892	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-9.1566
chr2	83693562	83693578	protein_coding	Fam171b	exon	ENSMUSG00000048388	NonProperStrand	175	chr11	97643006	97643060	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-0.8875
chr14	80262508	80262525	lincRNA	Gm6999	intron	ENSMUSG00000075495	ProperStrand	265	chr7	134336534	134336589	protein_coding	Cd2bp2	utr3	ENSMUSG00000042502	ProperStrand	73	1	-9.9416
chr6	57663022	57663056	protein_coding	Lancl2	exon	ENSMUSG00000062190	ProperStrand	2	chr4	131908689	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-inf
chr2	133197115	133197131	LINE	L2	L2	chr2L2133197117	NonProperStrand	1	chr5	121655016	121655095	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-inf
chr9	78023109	78023164	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr11	97034477	97034577	protein_coding	Kpnb1	exon	ENSMUSG00000001440	ProperStrand	197	1	-3.6045
chr13	35840984	35841074	protein_coding	Cdyl	intron	ENSMUSG00000059288	ProperStrand	18	chr14	52829486	52829566	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-10.6394
chr6	47757059	47757149	protein_coding	Pdia4	exon	ENSMUSG00000025823	ProperStrand	41	chr11	98878354	98878435	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	2	-11.3407
chr15	99236619	99237054	protein_coding	Tmbim6	exon	ENSMUSG00000023010	ProperStrand	64	chr7	116663649	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-4.2563
chr7	117189971	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	chr8	13876096	13876226	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	8	-1.5640
chr18	25837420	25837436	protein_coding	Celf4	intron	ENSMUSG00000024268	NonProperStrand	8	chr17	13099396	13101975	protein_coding	Pnldc1	exon	ENSMUSG00000073460	ProperStrand	2	1	-26.0014
chr19	53308074	53308121	protein_coding	Add3	exon	ENSMUSG00000025026	ProperStrand	27	chr1	88247743	88247768	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	2	-10.8060
chr17	26333883	26333900	protein_coding	Pdia2	exon	ENSMUSG00000024184	NonProperStrand	2	chr19	8963078	8963168	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-9.4105
chr6	27477030	27477120	protein_coding	Grm8	intron	ENSMUSG00000024211	NonProperStrand	15	chr4	100905009	100905089	protein_coding	Jak1	intron	ENSMUSG00000028530	ProperStrand	30	1	-17.7041
chr13	55141974	55152112	protein_coding	Uimc1	utr3	ENSMUSG00000025878	ProperStrand	25	chr11	6428068	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-8.0479
chr1	83740078	83740178	LTR	MLT2B3	ERVL	chr1MLT2B383739864	NonProperStrand	12	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	12	-inf
chr8	94149045	94149064	antisense	Gm3235	.	ENSMUSG00000090778	ProperStrand	11	chr4	101137731	101137798	protein_coding	Ak4	utr3	ENSMUSG00000028527	ProperStrand	20	1	-18.9599
chr15	88760411	88760427	protein_coding	Ttll8	intron	ENSMUSG00000022388	ProperStrand	2	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-10.5602
chr14	66211765	66211865	protein_coding	Elp3	intron	ENSMUSG00000022031	ProperStrand	71	chr18	73693165	73693185	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-5.1960
chr14	24593646	24593662	protein_coding	Kcnma1	intron	ENSMUSG00000063142	NonProperStrand	104	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.9938
chr2	30110990	30111007	protein_coding	Lrrc8a	exon	ENSMUSG00000007476	NonProperStrand	3	chr19	8788114	8788204	protein_coding	Slc3a2	exon	ENSMUSG00000010095	NonProperStrand	2	1	-inf
chr8	87366499	87366564	protein_coding	Calr	utr3	ENSMUSG00000003814	ProperStrand	232	chr15	79192825	79192893	protein_coding	Tmem184b	utr3	ENSMUSG00000009035	ProperStrand	37	2	-17.9989
chr4	53579349	53579455	protein_coding	Slc44a1	utr3	ENSMUSG00000028412	ProperStrand	38	chr1	162965555	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.1263
chr11	33060841	33061125	protein_coding	Npm1	exon	ENSMUSG00000057113	ProperStrand	352	chr2	130103462	130103502	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-4.5928
chr11	70403120	70403137	protein_coding	Mink1	intron	ENSMUSG00000020827	NonProperStrand	12	chr18	35714144	35714244	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-6.5851
chr5	136364956	136364973	protein_coding	Hspb1	exon	ENSMUSG00000004951	ProperStrand	25	chr4	131865410	131865500	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-5.6979
chr3	26220145	26220161	LINE	Lx4B	L1	chr3Lx4B26219849	NonProperStrand	13	chr8	129468746	129468832	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-7.4499
chr19	4765889	4765907	protein_coding	Rbm4b	utr3	ENSMUSG00000033760	NonProperStrand	7	chr1	173433179	173433225	protein_coding	B930036N10Rik	utr3	ENSMUSG00000091993	ProperStrand	150	1	-15.8923
chr11	48614053	48615223	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	chr15	79910918	79911351	protein_coding	Rpl3	exon	ENSMUSG00000060036	ProperStrand	8342	1	-0.8261
chr5	117559799	117559818	protein_coding	Suds3	exon	ENSMUSG00000066900	NonProperStrand	8	chr17	24857717	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-6.1404
chr17	45708119	45708422	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr1	95747404	95747447	protein_coding	D2hgdh	utr3	ENSMUSG00000073609	ProperStrand	3	2	-inf
chr7	19889330	19889347	protein_coding	Fosb	utr3	ENSMUSG00000003545	NonProperStrand	7	chr4	121870880	122132506	pseudogene	Gm12896	.	ENSMUSG00000083558	NonProperStrand	19	1	-19.8654
chr16	23110841	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	chr1	59761635	59761716	snoRNA	ENSMUSG00000089093_Snord11	.	ENSMUSG00000089093	ProperStrand	193	8	-0.9243
chr11	6115395	6115412	protein_coding	Npc1l1	intron	ENSMUSG00000020447	ProperStrand	1	chr4	131908826	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-inf
chrX	91441637	91441743	protein_coding	Eif2s3x	exon	ENSMUSG00000035150	ProperStrand	55	chr1	162966828	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	3	-14.6856
chr18	82662186	82662202	protein_coding	Mbp	intron	ENSMUSG00000041607	NonProperStrand	185	chr19	8798484	8798513	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-3.0969
chr1	78598686	78598723	LTR	RLTR41	ERV1	chr1RLTR4178598663	ProperStrand	3	chr2	130102054	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	3	-inf
chr11	50109646	50109746	protein_coding	Canx	utr3	ENSMUSG00000020368	ProperStrand	296	chr10	90581140	90581169	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-1.9429
chr16	30067020	30067044	protein_coding	Hes1	exon	ENSMUSG00000022528	ProperStrand	6	chr16	23111396	23111486	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-9.1716
chr15	24512484	24512502	LTR	IAPEY_LTR	ERVK	chr15IAPEY_LTR24512341	NonProperStrand	1	chr5	54389949	54389966	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	1	-inf
chr8	127993731	127993748	protein_coding	Sipa1l2	exon	ENSMUSG00000001995	NonProperStrand	8	chrX	138159145	138159161	protein_coding	Irs4	exon	ENSMUSG00000054667	NonProperStrand	98	1	-16.4252
chr3	104764495	104764511	protein_coding	Wnt2b	utr5	ENSMUSG00000027840	NonProperStrand	50	chr17	39985500	39985538	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-6.2919
chr8	122048403	122066809	protein_coding	Mbtps1	exon	ENSMUSG00000031835	ProperStrand	81	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-2.0061
chr19	45824895	45826271	protein_coding	Mgea5	utr3	ENSMUSG00000025220	ProperStrand	53	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-5.9689
chr15	88560794	88560884	protein_coding	Brd1	exon	ENSMUSG00000022387	ProperStrand	70	chr4	131908410	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	5	-7.1026
chr11	114533132	114533625	protein_coding	Rpl38	exon	ENSMUSG00000057322	ProperStrand	29	chr16	23110829	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.1645
chr2	69689832	69689848	Other	RMER1A	Other	chr2RMER1A69689105	ProperStrand	2	mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	1	-13.3333
chr16	17797445	17797463	protein_coding	Scarf2	utr5	ENSMUSG00000012017	NonProperStrand	4	chr9	120038620	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-8.5118
chr6	48410411	48410428	protein_coding	Sspo	exon	ENSMUSG00000029797	NonProperStrand	94	chr2	158185583	158185666	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	3	-12.9949
chr8	108145130	108145147	protein_coding	Fam65a	exon	ENSMUSG00000038604	NonProperStrand	7	chr7	116664820	116664922	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-6.7161
chr19	21892474	21898346	protein_coding	Tmem2	exon	ENSMUSG00000024754	ProperStrand	133	chr16	23110530	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.2290
chr13	6621187	6621269	protein_coding	Pfkp	exon	ENSMUSG00000021196	ProperStrand	197	chr5	140919021	140919111	protein_coding	Eif3b	utr3	ENSMUSG00000056076	ProperStrand	66	1	-10.7369
chr1	134228635	134228725	protein_coding	Nuak2	exon	ENSMUSG00000009772	ProperStrand	11	chr12	55797800	55797880	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	1	-11.1521
chr13	5555527	5555617	SINE	B3	B2	chr13B35555440	NonProperStrand	1	chr13	5555228	5555308	SINE	B3A	B2	chr13B3A5555207	ProperStrand	1	1	-inf
chr9	118466287	118466305	protein_coding	Golga4	exon	ENSMUSG00000038708	ProperStrand	95	chr9	15118322	15118357	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-2.6453
chr12	31972309	31972398	protein_coding	Lamb1	exon	ENSMUSG00000002900	ProperStrand	87	chr8	124125089	124125133	protein_coding	Zcchc14	utr3	ENSMUSG00000061410	ProperStrand	22	1	-14.6004
chr9	15118256	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	chr13	49779667	49779804	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	9	-2.1309
chr7	52304827	52304925	protein_coding	Prr12	exon	ENSMUSG00000046574	ProperStrand	86	chr11	99885311	99885327	protein_coding	Krt33b	exon	ENSMUSG00000057723	NonProperStrand	352	1	-9.0467
chr12	106460806	106460822	protein_coding	Tcl1	exon	ENSMUSG00000041359	NonProperStrand	2	chr2	63936034	63936053	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-15.3248
chr19	38198799	38198816	protein_coding	Rbp4	exon	ENSMUSG00000024990	ProperStrand	2	chr1	162965531	162965562	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-10.5602
chr7	30231482	30231582	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	chr8	113366288	113366332	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	2	-7.8954
chr10	79322184	79322231	protein_coding	Ptbp1	exon	ENSMUSG00000006498	ProperStrand	129	chr10	110918574	110918633	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-2.1143
chr11	116535951	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr10	70845772	70845805	protein_coding	Ipmk	utr3	ENSMUSG00000060733	ProperStrand	22	1	-7.9150
chr3	83570497	83570513	protein_coding	Sfrp2	exon	ENSMUSG00000027996	NonProperStrand	32	chr4	131908684	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.1812
chr2	11394203	11394222	protein_coding	Pfkfb3	utr3	ENSMUSG00000026773	NonProperStrand	7	chr3	123210911	123210972	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-6.1463
chr17	26257271	26257336	protein_coding	Tmem8	exon	ENSMUSG00000024180	ProperStrand	10	chr12	58331566	58331582	protein_coding	Mipol1	utr5	ENSMUSG00000047022	ProperStrand	40	1	-17.9020
chr4	3761671	3762661	protein_coding	Rps20	utr5	ENSMUSG00000028234	ProperStrand	71	chrX	34622906	34623024	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	3	-7.3887
chr1	64929704	64929804	protein_coding	Plekhm3	exon	ENSMUSG00000051344	ProperStrand	8	chr19	8799618	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-10.8847
chr7	140984838	140984856	protein_coding	Fank1	intron	ENSMUSG00000053111	NonProperStrand	1	chr8	129468745	129468799	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-inf
chr14	55264076	55264449	protein_coding	Acin1	exon	ENSMUSG00000022185	ProperStrand	67	chr5	130300520	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.3223
chr18	52677721	52677737	protein_coding	Lox	utr3	ENSMUSG00000024529	NonProperStrand	2	chr17	36005177	36005195	protein_coding	Ppp1r18	exon	ENSMUSG00000034595	NonProperStrand	17	1	-inf
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr6	112689098	112689322	protein_coding	Srgap3	exon	ENSMUSG00000030257	NonProperStrand	208	1	-5.3445
chr17	84329113	84329129	SINE	PB1D10	Alu	chr17PB1D1084329018	ProperStrand	1	chr5	130300419	130300470	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-inf
chr19	53082307	53082324	protein_coding	Xpnpep1	intron	ENSMUSG00000025027	NonProperStrand	58	chr10	126532147	126532163	protein_coding	Os9	utr3	ENSMUSG00000040462	NonProperStrand	28	1	-14.9188
chr4	133415993	133416091	protein_coding	Rps6ka1	exon	ENSMUSG00000003644	ProperStrand	68	chr1	162965552	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.0504
chr11	83993194	83993211	protein_coding	Acaca	intron	ENSMUSG00000020532	ProperStrand	100	chr9	15118519	15118573	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	1	-8.3193
chr19	46452649	46452683	protein_coding	Actr1a	utr3	ENSMUSG00000025228	ProperStrand	27	chr10	90581034	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	4	-19.6730
chr2	90235290	90235347	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	32260334	32260442	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	63	-inf
chr8	11835121	11835158	protein_coding	Arhgef7	utr3	ENSMUSG00000031511	ProperStrand	38	chr5	135884630	135884646	protein_coding	Hip1	utr3	ENSMUSG00000039959	NonProperStrand	23	1	-16.1763
chr11	120347051	120349421	protein_coding	Mrpl12	exon	ENSMUSG00000039640	ProperStrand	49	chr7	52382010	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-7.1146
chr4	116883449	116883565	snRNA	ENSMUSG00000070237_U5	.	ENSMUSG00000070237	ProperStrand	154	chr16	23110841	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	9	-2.2680
chr9	7932289	7932379	protein_coding	Yap1	utr3	ENSMUSG00000053110	ProperStrand	68	chr11	6428087	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	5	-13.1736
chr5	140857296	140857313	protein_coding	Snx8	intron	ENSMUSG00000029560	ProperStrand	106	chr10	90581241	90581282	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-3.7295
chr19	6058543	6059145	protein_coding	Fau	exon	ENSMUSG00000038274	ProperStrand	64	chr16	23111777	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-3.3051
chr4	147589546	147589563	DNA	MER91B	Tip100	chr4MER91B147589497	NonProperStrand	9	chr7	106628183	106628217	snoRNA	ENSMUSG00000064966_Snord15b	.	ENSMUSG00000064966	ProperStrand	74	1	-16.8067
chr2	29926947	29926989	protein_coding	Set	utr3	ENSMUSG00000054766	ProperStrand	167	chr7	116663721	116663770	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	4	-4.5344
chr8	113535277	113536658	protein_coding	Ddx19b	exon	ENSMUSG00000033658	ProperStrand	30	chr11	69483200	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.6945
chrX	45309393	45313712	protein_coding	Ocrl	exon	ENSMUSG00000001173	ProperStrand	9	chr1	162968244	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	2	-16.9066
chr2	24825186	24827046	protein_coding	Wdr85	exon	ENSMUSG00000026975	ProperStrand	323	chr8	80959345	80959392	protein_coding	Pou4f2	exon	ENSMUSG00000031688	ProperStrand	2	1	-17.7174
chr15	25709476	25709543	protein_coding	Myo10	exon	ENSMUSG00000022272	ProperStrand	168	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-6.5463
chr9	55042942	55043032	protein_coding-noncoding	Ube2q2	utr5	ENSMUSG00000032307	NonProperStrand	1	chr9	55043629	55043710	protein_coding	Ube2q2	intron	ENSMUSG00000032307	NonProperStrand	3	1	-inf
chr9	30984693	30985546	protein_coding	Aplp2	exon	ENSMUSG00000031996	ProperStrand	172	chr3	137527562	137527642	protein_coding	H2afz	utr5	ENSMUSG00000037894	ProperStrand	72	1	-10.8335
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr9	61761233	61761290	protein_coding	Rplp1	exon	ENSMUSG00000007892	ProperStrand	116	1	-6.6643
chr7	16534823	16534839	protein_coding	Ehd2	utr3	ENSMUSG00000074364	NonProperStrand	197	chr4	131865855	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-2.3018
chr17	24869755	24869771	protein_coding	Rpl3l	utr5	ENSMUSG00000002500	NonProperStrand	56	chr9	120037898	120037920	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-4.8388
chr11	96689121	96689221	protein_coding	Nfe2l1	utr5	ENSMUSG00000038615	ProperStrand	118	chr2	26768399	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-4.2975
chr10	82456766	82456784	protein_coding	Chst11	intron	ENSMUSG00000034612	ProperStrand	170	chr1	89673686	89673786	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-1.5273
chrX	132674412	132674441	protein_coding	Bex4	exon	ENSMUSG00000047844	ProperStrand	13	chr3	123210854	123210894	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	5	-19.7111
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr7	26590902	26590927	protein_coding	Cyp2s1	exon	ENSMUSG00000040703	ProperStrand	18	1	-9.4558
chr19	9077531	9077579	protein_coding	Ahnak	exon	ENSMUSG00000069833	ProperStrand	103	chr14	33005139	33005234	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	2	-5.1837
chr9	122762107	122762130	protein_coding	Zfp445	exon	ENSMUSG00000047036	ProperStrand	8	chr4	131865884	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-9.1913
chr4	43505655	43505927	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr2	179322380	179627979	protein_coding	Cdh4	exon	ENSMUSG00000000305	ProperStrand	171	2	-2.5836
chr8	129468746	129468871	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	chr3	96138577	96138597	tRNA	tRNA757-AsnGTT	.	183155	ProperStrand	3	1	-10.6898
chr12	31992022	31992849	protein_coding	Lamb1	exon	ENSMUSG00000002900	ProperStrand	87	chr4	131908236	131908319	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.9254
chr7	129311113	129311171	protein_coding	Plk1	exon	ENSMUSG00000030867	ProperStrand	146	chr16	43886794	43886877	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	1	-6.3110
chr18	35714262	35714291	lincRNA	Snhg4	intron	ENSMUSG00000090430	ProperStrand	270	chrX	34622960	34623037	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-0.8480
chr17	21099670	21102270	protein_coding	Ppp2r1a	exon	ENSMUSG00000007564	ProperStrand	57	chr14	33005146	33005236	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	4	-13.2505
chr4	79650816	79650860	pseudogene	Gm11410	.	ENSMUSG00000083219	ProperStrand	47	chr4	131908236	131908292	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.7849
chr8	81081498	81081562	protein_coding	Slc10a7	intron	ENSMUSG00000031684	ProperStrand	55	chr5	74489564	74489654	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	8	-19.2033
chr13	55945990	55946007	LINE	L1MD2	L1	chr13L1MD255945962	ProperStrand	6	chr7	116664800	116664854	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-7.0474
chr14	124353869	124353886	protein_coding	Itgbl1	exon	ENSMUSG00000032925	ProperStrand	159	chr6	86475263	86475290	protein_coding	Pcbp1	exon	ENSMUSG00000051695	ProperStrand	108	1	-10.1772
chr2	57090809	57090827	protein_coding	Gpd2	utr5	ENSMUSG00000026827	ProperStrand	93	chr11	116938560	116938650	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-5.3011
chr7	51503529	51503549	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	chr19	40990853	40990933	protein_coding	Zfp518a	utr3	ENSMUSG00000049164	ProperStrand	9	4	-inf
chr2	70927899	70927917	protein_coding	Dcaf17	exon	ENSMUSG00000041966	NonProperStrand	89	chr7	116663653	116663767	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-5.2051
chr7	52748896	52748927	protein_coding	Nucb1	utr3	ENSMUSG00000030824	ProperStrand	49	chr1	141373476	141374019	protein_coding	Aspm	exon	ENSMUSG00000033952	ProperStrand	64	1	-13.5909
chr1	88252838	88252861	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	chr13	49779667	49779694	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-1.0531
chr15	97814433	97814796	protein_coding	Col2a1	exon	ENSMUSG00000022483	ProperStrand	34	chr1	71632793	71633405	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	1	-8.9739
chr13	76341035	76341055	protein_coding	Fam81b	intron	ENSMUSG00000078966	NonProperStrand	220	chr3	123210913	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-0.9322
chr10	80641957	80642106	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr17	24343586	24343602	protein_coding	Ntn3	exon	ENSMUSG00000079662	ProperStrand	237	1	-3.4729
chr10	109268158	109268176	protein_coding	Nav3	intron	ENSMUSG00000020181	NonProperStrand	8	chr3	108357390	108357418	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-8.5976
chr3	128921394	128921434	protein_coding	Pitx2	exon	ENSMUSG00000028023	ProperStrand	8	chr19	17078304	17081117	protein_coding	Prune2	exon	ENSMUSG00000039126	ProperStrand	49	1	-17.9732
chr10	57917404	57917422	protein_coding	Ranbp2	exon	ENSMUSG00000003226	ProperStrand	52	chr3	19528533	19528550	protein_coding	1700064H15Rik	exon	ENSMUSG00000082766	NonProperStrand	78	1	-13.0765
chr11	80415108	80415125	protein_coding	Myo1d	exon	ENSMUSG00000035441	ProperStrand	144	chr9	50816824	50816841	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	1	-10.0510
chr2	158182156	158182241	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	chr4	116828431	116828453	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	3	-2.8643
chr13	107629988	107630078	protein_coding	Ipo11	intron	ENSMUSG00000078933	ProperStrand	3	chr11	69483144	69483224	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-8.5256
chr15	99042693	99042773	protein_coding	Spats2	exon	ENSMUSG00000051934	ProperStrand	71	chr19	8963024	8963114	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.9988
chr5	75473198	75473215	protein_coding	Gsx2	utr3	ENSMUSG00000035946	ProperStrand	307	chr1	88252836	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-3.5035
chr11	3333359	3333410	protein_coding	Rnf185	intron	ENSMUSG00000020448	ProperStrand	12	chr7	148634701	148634787	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-11.6281
chr2	163428098	163428114	protein_coding	Ttpal	utr5	ENSMUSG00000017679	NonProperStrand	3	chr19	8963027	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-8.3179
chr7	107128766	107128811	protein_coding	Rnf169	exon	ENSMUSG00000058761	ProperStrand	31	chr10	110918634	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-7.8118
chr9	62779538	62779556	protein_coding	Pias1	intron	ENSMUSG00000032405	NonProperStrand	5	chr17	39985194	39985258	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-11.0622
chr5	121891342	121891430	protein_coding	Naa25	utr3	ENSMUSG00000042719	ProperStrand	95	chr2	26493366	26493393	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	4	-10.0960
chr14	68314723	68314771	protein_coding	Cdca2	exon	ENSMUSG00000048922	ProperStrand	50	chr1	89681184	89681274	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-5.7983
chr4	46499767	46499784	SINE	ID_B1	B4	chr4ID_B146499735	ProperStrand	33	chr9	120037898	120037967	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-5.8732
chr8	97896861	97896878	protein_coding	Mmp15	utr3	ENSMUSG00000031790	NonProperStrand	8	chr11	87240282	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	1	-15.1308
chr4	129269359	129269591	protein_coding	Eif3i	exon	ENSMUSG00000028798	ProperStrand	9	chr10	23505559	23505621	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	3	-20.6871
chr2	57090809	57090827	protein_coding	Gpd2	utr5	ENSMUSG00000026827	ProperStrand	93	chr5	120987613	120987629	protein_coding	Tpcn1	exon	ENSMUSG00000032741	ProperStrand	15	1	-15.2550
chr10	61731938	61755129	protein_coding	Hk1	utr3	ENSMUSG00000037012	ProperStrand	84	chr3	68889051	68889141	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	2	-4.6535
chr4	125389822	125389845	protein_coding	Grik3	utr3	ENSMUSG00000001985	ProperStrand	126	chr4	131908809	131908896	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-2.5460
chr9	40612830	40612920	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	chr13	49779747	49779802	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-3.3939
chr3	31102559	31102576	protein_coding	Slc7a14	utr3	ENSMUSG00000069072	ProperStrand	20	chrX	34622930	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-5.2611
chr18	10052132	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr19	38869531	38869547	protein_coding	Noc3l	exon	ENSMUSG00000024999	NonProperStrand	149	1	-6.9890
chr17	39985130	39985153	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr2	22444186	22444286	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-1.0845
chr9	40612122	40612149	snoRNA	ENSMUSG00000075924_Snord14d	.	ENSMUSG00000075924	ProperStrand	131	chr7	29136540	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.1724
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr3	100846885	100846932	protein_coding	Ptgfrn	utr3	ENSMUSG00000027864	ProperStrand	67	1	-5.6870
chr9	108927556	108927574	protein_coding	Pfkfb4	exon	ENSMUSG00000025648	ProperStrand	6	chr5	121655100	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-8.3778
chr13	9833551	9833651	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr4	135607187	135607540	protein_coding	Rpl11	exon	ENSMUSG00000059291	ProperStrand	152	1	-3.2103
chr8	28370923	28370939	protein_coding	Eif4ebp1	exon	ENSMUSG00000031490	NonProperStrand	35	chr2	139504270	139504288	protein_coding	Ism1	utr5	ENSMUSG00000074766	ProperStrand	8	1	-17.9876
chr11	93814163	93816856	protein_coding	Gm20390	exon	ENSMUSG00000091228	ProperStrand	33	chr16	23110909	23110962	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.9284
chr18	61715367	61715388	protein_coding	Csnk1a1	utr5	ENSMUSG00000024576	NonProperStrand	35	chr14	33005038	33005095	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	2	-8.3063
chr7	3296895	3296995	protein_coding	Myadm	exon	ENSMUSG00000068566	ProperStrand	31	chr7	52382235	52382256	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-9.6128
chr14	76362754	76362771	protein_coding	Kctd4	exon	ENSMUSG00000046523	ProperStrand	1	chr10	110918547	110918638	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-inf
chr2	50253560	50253577	lincRNA	Gm13483	intron	ENSMUSG00000085862	ProperStrand	4	chr18	75160711	75160741	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	1	-14.8554
chr2	121021839	121021855	protein_coding	Trp53bp1	utr3	ENSMUSG00000043909	ProperStrand	45	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-7.8087
chr11	62085602	62085711	protein_coding	Zswim7	intron	ENSMUSG00000014243	ProperStrand	6	chr4	132530098	132530117	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	1	-14.3586
chr2	158205265	158205365	snoRNA	ENSMUSG00000064585_SNORA71	.	ENSMUSG00000064585	NonProperStrand	3	chr16	23110940	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr14	55264086	55264124	protein_coding	Acin1	exon	ENSMUSG00000022185	ProperStrand	67	chr7	117190017	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.1324
chr9	44322217	44322317	protein_coding	Cxcr5	exon	ENSMUSG00000047880	NonProperStrand	3	chr14	33005038	33005061	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-10.2437
chr15	79585216	79585232	lincRNA	Gm16576	exon	ENSMUSG00000087543	NonProperStrand	55	chr7	140292907	140292945	protein_coding	Ctbp2	intron	ENSMUSG00000030970	ProperStrand	89	1	-12.6973
chr17	38290745	38290764	LTR	MurERV4-int	ERVK	chr17MurERV4-int38290059	ProperStrand	21	chr2	84530865	84531297	protein_coding	Zdhhc5	exon	ENSMUSG00000034075	NonProperStrand	144	1	-13.6862
chr8	120984676	120984696	protein_coding	Cdh13	intron	ENSMUSG00000031841	ProperStrand	60	chr18	35716810	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-3.8920
chr17	13679904	13679989	protein_coding-noncoding	Tcte2	utr3	ENSMUSG00000038347	NonProperStrand	1	chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-inf
chr15	45130790	45130809	LINE	L1_Mus2	L1	chr15L1_Mus245129537	NonProperStrand	17	chr6	83318070	83318086	protein_coding	Tet3	exon	ENSMUSG00000034832	NonProperStrand	93	1	-14.9884
chr3	69543756	69543872	protein_coding	Nmd3	intron	ENSMUSG00000027787	ProperStrand	18	chr8	129468743	129468780	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	2	-11.0064
chr18	35714968	35716887	lincRNA	Snhg4	intron	ENSMUSG00000090430	ProperStrand	270	chr3	123210883	123210979	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-1.1975
chr2	90235297	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr12	73895263	73895318	protein_coding	Ppm1a	utr3	ENSMUSG00000021096	ProperStrand	53	2	-7.7963
chr2	29925723	29925856	protein_coding	Set	exon	ENSMUSG00000054766	ProperStrand	167	chr9	15119631	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	6	-8.2506
chr4	32847724	32847814	protein_coding	Mdn1	exon	ENSMUSG00000058006	ProperStrand	184	chr7	117189863	117189943	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-4.0457
chr1	183851794	183851855	protein_coding	Enah	exon	ENSMUSG00000022995	ProperStrand	196	chr6	87769189	87769558	protein_coding	Isy1	exon	ENSMUSG00000030056	ProperStrand	172	1	-8.8291
chrX	45475094	45475111	protein_coding	Xpnpep2	exon	ENSMUSG00000037005	ProperStrand	32	chr12	17552949	17553032	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-6.3255
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chrX	160591070	160591086	protein_coding	Ace2	exon	ENSMUSG00000015405	NonProperStrand	3	1	-12.2357
chrX	20002887	20002903	protein_coding	Phf16	utr5	ENSMUSG00000037315	ProperStrand	22	chr9	120038499	120038589	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.9307
chr9	111138460	111138489	protein_coding	Mlh1	exon	ENSMUSG00000032498	ProperStrand	13	chr8	64028594	64028612	protein_coding	Palld	exon	ENSMUSG00000058056	NonProperStrand	125	1	-14.9478
chr10	58930529	58953856	protein_coding	Ccdc109a	exon	ENSMUSG00000009647	ProperStrand	6	chr14	56214260	56214276	protein_coding	Rnf31	intron	ENSMUSG00000047098	NonProperStrand	5	1	-19.0115
chr6	94568229	94568248	protein_coding	Lrig1	intron	ENSMUSG00000030029	NonProperStrand	3	chr14	76247725	76247772	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-10.4338
chr8	13159389	13159405	protein_coding	Lamp1	exon	ENSMUSG00000031447	ProperStrand	92	chr9	85637591	85637607	protein_coding	Ibtk	utr5	ENSMUSG00000035941	NonProperStrand	22	1	-14.4940
chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	chr5	23358030	23358077	snoRNA	ENSMUSG00000093321_Snord93	.	ENSMUSG00000093321	ProperStrand	218	1	-5.5603
chr2	30197281	30197899	protein_coding	Nup188	exon	ENSMUSG00000052533	ProperStrand	96	chr2	149708906	149708924	protein_coding	Tmem90b	intron	ENSMUSG00000074736	NonProperStrand	6	1	-17.0990
chr4	108700112	108700169	protein_coding	Nrd1	intron	ENSMUSG00000053510	ProperStrand	76	chr11	101466256	101466350	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	1	-8.3984
chr9	36913426	36913447	protein_coding	Pknox2	intron	ENSMUSG00000035934	ProperStrand	8	chr18	35716737	35716827	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-14.3467
chr9	119311303	119311393	Low_complexity	C-rich	Low_complexity	chr9C-rich119311297	ProperStrand	13	chr4	131908811	131908891	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	12	-inf
chr19	6340073	6340173	protein_coding	Men1	utr3	ENSMUSG00000024947	ProperStrand	24	chr15	34370545	34370616	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-5.3037
chr2	57090809	57090828	protein_coding	Gpd2	utr5	ENSMUSG00000026827	ProperStrand	93	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	2	-9.8395
chr3	116605300	116605334	protein_coding	Frrs1	exon	ENSMUSG00000033386	ProperStrand	27	chr16	23110891	23110956	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.1875
chr19	43515227	43515250	protein_coding	Cnnm1	exon	ENSMUSG00000025189	ProperStrand	4	chr11	97643037	97643092	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-7.8635
chr9	118975835	118975886	protein_coding	Vill	exon	ENSMUSG00000038775	ProperStrand	4	chr2	26768049	26768119	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	1	-14.0630
chr8	112387973	112387989	antisense	Gm17344	.	ENSMUSG00000078143	NonProperStrand	100	chrX	147779211	147779228	protein_coding	Fam120c	exon	ENSMUSG00000025262	ProperStrand	6	1	-17.0140
chr5	147646769	147646849	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	chr14	33005096	33005141	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	4	-1.6781
chr5	19721265	19721281	protein_coding	Magi2	exon	ENSMUSG00000040003	ProperStrand	49	chr3	86351193	86351211	protein_coding	Mab21l2	exon	ENSMUSG00000057777	ProperStrand	2	1	-inf
chr5	147646625	147646671	protein_coding	Rpl21	exon	ENSMUSG00000041453	ProperStrand	112	chr2	144087380	144087398	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-5.3209
chr16	18951783	18952211	protein_coding	Hira	exon	ENSMUSG00000022702	ProperStrand	28	chr2	26494710	26494800	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.5336
chr14	48145948	48148854	protein_coding	Fbxo34	utr5	ENSMUSG00000037536	ProperStrand	11	chr3	123210906	123210975	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	4	-16.7925
chrX	84483736	84483760	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr12	55962002	55962086	protein_coding	Cfl2	utr3	ENSMUSG00000062929	ProperStrand	4	1	-13.9221
chr6	125136475	125136575	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	chr13	21261553	21261580	tRNA	tRNA999-MetCAT	.	208756	ProperStrand	63	1	-6.3452
chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	chr11	62416977	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	2	-2.6181
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr2	144087323	144087454	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	4	-2.5182
chr7	129311263	129312092	protein_coding	Plk1	exon	ENSMUSG00000030867	ProperStrand	146	chr9	31019243	31019301	protein_coding	Aplp2	exon	ENSMUSG00000031996	ProperStrand	172	2	-14.8808
chr7	112782969	112782985	protein_coding	Arfip2	utr3	ENSMUSG00000030881	ProperStrand	191	chr14	56159295	56159311	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	1	-8.6202
chr2	16278620	16278638	protein_coding	Plxdc2	utr5	ENSMUSG00000026748	NonProperStrand	44	chr13	51743567	51743661	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	2	-11.9969
chr9	113651345	113651403	protein_coding	Clasp2	intron	ENSMUSG00000033392	ProperStrand	30	chr14	33005138	33005238	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-5.3288
chr16	23111373	23111484	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	chr11	48614367	48614435	snoRNA	ENSMUSG00000064500_SNORD95	.	ENSMUSG00000064500	ProperStrand	100	3	-2.3035
chr9	65049529	65049609	snRNA	ENSMUSG00000075930_U5	.	ENSMUSG00000075930	ProperStrand	175	chr7	116664809	116664899	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-0.9417
chr5	137773855	137773899	protein_coding	Slc12a9	utr5	ENSMUSG00000037344	ProperStrand	7	chr15	79913288	79913351	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-12.8181
chr4	137068348	137068577	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	chr8	26100833	26101769	protein_coding	Adam9	exon	ENSMUSG00000031555	ProperStrand	7	1	-12.5246
chr4	131933119	131933219	protein_coding	Phactr4	exon	ENSMUSG00000066043	ProperStrand	29	chr9	15118323	15118377	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-4.8457
chr8	63391530	63391546	protein_coding	Clcn3	utr3	ENSMUSG00000004319	NonProperStrand	5	chr11	97642950	97643037	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-7.3581
chr12	112215257	112215273	protein_coding	Ankrd9	exon	ENSMUSG00000037904	NonProperStrand	35	chr2	91436315	91436335	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-8.5781
chr11	115883741	115883828	protein_coding	H3f3b	utr3	ENSMUSG00000016559	ProperStrand	76	chr15	79908929	79908981	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	2	-8.2618
chr9	122895680	122895697	protein_coding	Kif15	exon	ENSMUSG00000036768	ProperStrand	46	chr11	106362639	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-7.9355
chrX	98643418	98643478	protein_coding	Nono	utr3	ENSMUSG00000031311	ProperStrand	102	chr11	106362304	106362330	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-4.8107
chr7	111869045	111869135	LINE	L1Md_T	L1	chr7L1Md_T111863432	ProperStrand	2	chr1	12658114	12658194	lincRNA	Gm17644	exon	ENSMUSG00000066918	NonProperStrand	37	2	-inf
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr19	9043859	9043954	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	1	-3.2403
chr6	143116067	143129117	protein_coding	Etnk1	exon	ENSMUSG00000030275	ProperStrand	61	chr16	23111447	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.2363
chr10	116492205	116493099	protein_coding	Cct2	exon	ENSMUSG00000034024	ProperStrand	100	chr7	29136537	29136617	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.5524
chr4	138910094	138910194	protein_coding	C230096C10Rik	exon	ENSMUSG00000078517	ProperStrand	69	chr9	15118256	15118321	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.2118
chr10	57955229	57955319	protein_coding	Ranbp2	exon	ENSMUSG00000003226	ProperStrand	52	chr11	69483199	69483279	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.6966
chr17	24306166	24306202	protein_coding	Atp6v0c	exon	ENSMUSG00000024121	ProperStrand	75	chr18	10151072	10151139	snRNA	ENSMUSG00000065941_U1	.	ENSMUSG00000065941	ProperStrand	47	2	-inf
chr14	76247710	76247788	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	chr4	86232393	86232483	snoRNA	ENSMUSG00000088958_Scarna8	.	ENSMUSG00000088958	ProperStrand	366	5	-6.7551
chr18	21054478	21054494	protein_coding	Trappc8	exon	ENSMUSG00000033382	ProperStrand	43	chr7	29191407	29191461	protein_coding	Samd4b	exon	ENSMUSG00000037513	ProperStrand	72	1	-13.6242
chr3	34549411	34549442	protein_coding	Sox2	exon	ENSMUSG00000074637	ProperStrand	299	chr9	15119287	15119382	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	2	-3.8908
chr5	104920992	104921011	protein_coding	Pkd2	intron	ENSMUSG00000034462	NonProperStrand	5	chr4	131865892	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-10.8861
chr6	39370405	39370432	protein_coding	Mkrn1	utr5	ENSMUSG00000029922	ProperStrand	177	chr16	23110525	23110579	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-0.8672
chrX	39461662	39461727	protein_coding	Xiap	utr3	ENSMUSG00000025860	ProperStrand	14	chr19	25484358	25484374	protein_coding	Kank1	exon	ENSMUSG00000032702	ProperStrand	218	1	-13.6934
chr17	57130055	57130723	protein_coding	Clpp	exon	ENSMUSG00000002660	ProperStrand	15	chr15	98350182	98350272	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-7.5168
chr2	27390504	27390604	protein_coding	Wdr5	utr3	ENSMUSG00000026917	ProperStrand	81	chr7	67123696	67123719	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	1	-8.9370
chr2	165631049	165631066	protein_coding	Zmynd8	intron	ENSMUSG00000039671	ProperStrand	81	chr2	32818884	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-4.8882
chr5	29895933	29895949	protein_coding	Ube3c	utr5	ENSMUSG00000039000	ProperStrand	48	chr5	74489594	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	3	-10.1745
mmu-miR-5100	4	20	miRNA	mmu-miR-5100	.	mmu-miR-5100	ProperStrand	132	chr9	120038467	120038527	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	4	-6.8010
chrX	165092856	165092873	protein_coding	Msl3	exon	ENSMUSG00000031358	ProperStrand	2	chr12	110887828	110887894	snoRNA	ENSMUSG00000084549_SNORD113	.	ENSMUSG00000084549	ProperStrand	196	1	-19.1301
chr5	76645571	76645634	protein_coding	Clock	utr3	ENSMUSG00000029238	ProperStrand	16	chr9	120039661	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	3	-13.7563
chr17	45705900	45705980	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr16	18240809	18240899	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	1	-2.7639
chr16	4551318	4551387	protein_coding	Tfap4	exon	ENSMUSG00000005718	ProperStrand	15	chr14	76247711	76247768	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	5	-19.7552
chr13	48681810	48681844	protein_coding	Ptpdc1	exon	ENSMUSG00000038042	ProperStrand	7	chr4	131865913	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.7768
chr11	76027148	76027208	protein_coding	Glod4	utr3	ENSMUSG00000017286	ProperStrand	23	chr2	10111461	10111478	protein_coding	Itih5	intron	ENSMUSG00000025780	NonProperStrand	12	1	-18.3296
chr1	173341933	173341949	protein_coding	Usf1	utr5	ENSMUSG00000026641	NonProperStrand	144	chr6	115758072	115758119	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-3.7990
chr8	90304979	90304995	protein_coding	Zfp423	exon	ENSMUSG00000045333	NonProperStrand	44	chr9	15118322	15118346	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-4.0451
chr8	125007251	125007426	protein_coding	Fam38a	exon	ENSMUSG00000014444	ProperStrand	132	chr11	77995189	77995227	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-4.6491
chr10	90581055	90581270	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	chr4	116828379	116828452	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	2	-1.5495
chr11	104150228	104150277	protein_coding	Mapt	intron	ENSMUSG00000018411	NonProperStrand	11	chr4	131908254	131908344	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	7	-19.4235
chr17	24857712	24857741	protein_coding-noncoding	Rps2	utr5	ENSMUSG00000044533	ProperStrand	29	chr5	121655019	121655109	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-8.4864
chr7	3366461	3366524	protein_coding	Cacng7	exon	ENSMUSG00000069806	ProperStrand	29	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-4.5691
chr17	66915848	66915866	protein_coding	9130404H23Rik	intron	ENSMUSG00000024105	ProperStrand	3	chr16	23110873	23110915	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr6	112636571	112636617	protein_coding	Rad18	intron	ENSMUSG00000030254	ProperStrand	38	chr3	108357256	108357356	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-5.4259
chr6	83967899	83967979	protein_coding	Dysf	intron	ENSMUSG00000033788	NonProperStrand	9	chr2	155264734	155264824	protein_coding	Ncoa6	intron	ENSMUSG00000038369	ProperStrand	12	1	-20.0762
chr7	47340163	47340179	LTR	MTD	MaLR	chr7MTD47340161	ProperStrand	7	chr11	69730353	69730394	protein_coding	Eif5a	utr3	ENSMUSG00000078812	ProperStrand	164	1	-15.7451
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	114123659	114123675	protein_coding	Znrf1	intron	ENSMUSG00000033545	ProperStrand	13	1	-7.5011
chr2	137893776	137893794	LINE	Lx8	L1	chr2Lx8137893620	ProperStrand	3	chr16	23110904	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr16	37777391	37777408	protein_coding	Fstl1	exon	ENSMUSG00000022816	ProperStrand	179	chr1	162967743	162967806	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	1	-8.0611
chr17	63669990	63670080	protein_coding	Fbxl17	intron	ENSMUSG00000023965	ProperStrand	14	chr12	103380822	103380902	protein_coding	Slc24a4	intron	ENSMUSG00000041771	NonProperStrand	5	1	-20.6519
chr1	187066865	187066917	snoRNA	ENSMUSG00000077571_Snora36b	.	ENSMUSG00000077571	ProperStrand	244	chr4	132394301	132394401	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	1	-6.3496
chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	chr1	162966809	162966868	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	2	-3.9723
chr8	24367213	24367517	protein_coding	Golga7	utr5	ENSMUSG00000015341	ProperStrand	36	chr19	8798512	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	3	-14.3005
chr11	55296213	55296333	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	chr14	76247715	76247842	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	40	-19.8570
chr6	38077526	38077588	protein_coding	D630045J12Rik	utr3	ENSMUSG00000063455	ProperStrand	22	chr18	73693110	73693136	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	4	-inf
chr2	162915296	162915315	LTR	RLTR11B	ERVK	chr2RLTR11B162915116	ProperStrand	29	chr1	34248070	34248162	protein_coding	Dst	utr5	ENSMUSG00000026131	ProperStrand	461	1	-10.6981
chr8	13416895	13416912	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr5	30790882	30790898	protein_coding	Cib4	exon	ENSMUSG00000053194	ProperStrand	31	1	-7.7724
chr5	93635259	93635276	protein_coding	Ccni	utr5	ENSMUSG00000063015	NonProperStrand	4	chr10	23505150	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-10.6986
chr11	97034452	97034542	protein_coding	Kpnb1	exon	ENSMUSG00000001440	ProperStrand	197	chr14	76247714	76247794	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-2.0594
chr18	6201733	6201823	protein_coding	Kif5b	utr3	ENSMUSG00000006740	ProperStrand	65	chr9	15118256	15118337	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.3202
chr5	116039316	116040259	protein_coding	Gcn1l1	exon	ENSMUSG00000041638	ProperStrand	408	chr5	74489596	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-0.7575
chr11	59514243	59514261	protein_coding	Mprip	intron	ENSMUSG00000005417	ProperStrand	58	chr10	84565532	84565626	protein_coding	AI597468	utr5	ENSMUSG00000060935	ProperStrand	8	3	-20.6755
chr7	26587945	26588020	protein_coding	Cyp2s1	utr3	ENSMUSG00000040703	ProperStrand	18	chr1	162968486	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-8.4949
chr10	3219712	3219728	protein_coding	Cnksr3	exon	ENSMUSG00000015202	ProperStrand	22	chr15	98356869	98356913	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	1	-9.7776
chr2	129998643	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr9	40762540	40762559	protein_coding	4931429I11Rik	intron	ENSMUSG00000032023	NonProperStrand	49	1	-8.5152
chr9	114006576	114006625	protein_coding	Susd5	utr3	ENSMUSG00000086596	ProperStrand	10	chr2	26493366	26493391	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-7.2843
chr15	43097819	43097915	protein_coding	Eif3e	intron	ENSMUSG00000022336	ProperStrand	17	chr17	35089184	35089239	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-8.0062
chr6	115757945	115758045	protein_coding	Rpl32	intron	ENSMUSG00000057841	ProperStrand	137	chr19	8798742	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-3.2538
chr11	11867679	11870432	protein_coding	Grb10	exon	ENSMUSG00000020176	NonProperStrand	159	chr3	153575109	153575168	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	1	-6.5581
chr9	108416507	108416679	protein_coding	Qars	exon	ENSMUSG00000032604	ProperStrand	16	chr1	88247743	88247802	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-7.7318
chr2	130101900	130102178	protein_coding	Nop56	exon	ENSMUSG00000027405	ProperStrand	125	chr1	89681131	89681239	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	2	-6.7646
chr2	71587428	71587453	lincRNA	Gm17250	intron	ENSMUSG00000090953	ProperStrand	2	chr7	52713556	52713609	protein_coding	Ftl1	exon	ENSMUSG00000050708	ProperStrand	807	2	-inf
chr7	99795969	99796010	protein_coding	Pcf11	intron	ENSMUSG00000041328	NonProperStrand	1	chr16	23110845	23110874	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr13	9833552	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr8	108703209	108703309	protein_coding	Slc7a6	exon	ENSMUSG00000031904	ProperStrand	22	1	-6.9384
chr17	35290943	35291059	protein_coding	Prrc2a	exon	ENSMUSG00000024393	ProperStrand	315	chr9	110544350	110544366	protein_coding	Nbeal2	exon	ENSMUSG00000056724	ProperStrand	161	1	-8.0165
chr12	110881089	110881114	lincRNA	Rian	intron	ENSMUSG00000091793	ProperStrand	612	chr7	148548619	148548719	protein_coding	Eps8l2	utr3	ENSMUSG00000025504	ProperStrand	14	1	-11.6248
chr7	51505241	51505309	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	chr6	125136468	125136568	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	1	-1.7188
chr5	30446129	30446172	protein_coding	Hadha	utr3	ENSMUSG00000025745	ProperStrand	35	chr16	23111770	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.8115
chr8	64406923	64407008	protein_coding	Ddx60	utr5	ENSMUSG00000037921	ProperStrand	4	chr6	148732321	148732341	protein_coding	Ipo8	intron	ENSMUSG00000040029	ProperStrand	22	3	-21.8690
chr11	101466291	101466352	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	chr1	88247777	88247849	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-1.2442
chr8	91566575	91566598	protein_coding	Sall1	intron	ENSMUSG00000031665	ProperStrand	96	chr12	88778631	88778754	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-5.5738
chr9	59519843	59523417	protein_coding	Pkm2	exon	ENSMUSG00000032294	NonProperStrand	18	chr8	73419686	73419776	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	NonProperStrand	53	1	-15.9810
chr4	116883455	116883565	snRNA	ENSMUSG00000070237_U5	.	ENSMUSG00000070237	ProperStrand	154	chr4	131865855	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.2081
chr11	83135515	83135561	protein_coding	Ap2b1	exon	ENSMUSG00000035152	ProperStrand	60	chr11	97642952	97642973	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.4717
chr15	79546298	79546398	protein_coding	Gtpbp1	exon	ENSMUSG00000042535	ProperStrand	56	chr7	117190025	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.4587
chr1	36610607	36610804	protein_coding	Sema4c	exon	ENSMUSG00000026121	ProperStrand	2	chr5	108334264	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	2	-inf
chr11	78020944	78020975	protein_coding	Supt6h	utr3	ENSMUSG00000002052	NonProperStrand	3	chr9	118584070	118584140	protein_coding	Itga9	intron	ENSMUSG00000039115	ProperStrand	27	1	-21.2276
chr10	127998003	127999937	protein_coding	Pa2g4	exon	ENSMUSG00000025364	ProperStrand	72	chr4	131908300	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-2.2645
chr5	111078701	111078827	protein_coding	Noc4l	exon	ENSMUSG00000033294	NonProperStrand	4	chr16	23110921	23111010	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-12.7696
chr6	124691242	124691296	protein_coding	Grcc10	utr5	ENSMUSG00000072772	ProperStrand	88	chr9	15119731	15119760	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-3.5993
chr2	26493438	26493518	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr6	114825552	114825642	protein_coding	Vgll4	intron	ENSMUSG00000030315	ProperStrand	12	1	-9.4487
chr13	58300394	58316691	protein_coding	Ubqln1	exon	ENSMUSG00000005312	ProperStrand	49	chr11	97642952	97643014	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.8235
chr18	74940142	74940163	protein_coding	Acaa2	intron	ENSMUSG00000036880	NonProperStrand	2	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-15.6461
chr11	113523870	113523887	protein_coding	Cog1	utr3	ENSMUSG00000018661	ProperStrand	51	chr7	122966867	122966884	protein_coding	Sox6	intron	ENSMUSG00000051910	ProperStrand	18	1	-16.0779
chr9	58050786	58050804	protein_coding	Islr2	intron	ENSMUSG00000051243	ProperStrand	14	chr18	35102297	35102347	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	5	-inf
chr10	75129761	75129779	protein_coding	Cabin1	intron	ENSMUSG00000020196	ProperStrand	62	chr11	116701744	116701803	protein_coding	Jmjd6	exon	ENSMUSG00000056962	ProperStrand	92	1	-12.3897
chr8	28383923	28385573	protein_coding	Eif4ebp1	exon	ENSMUSG00000031490	ProperStrand	22	chr12	106269284	106269361	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-6.0966
chr2	5260282	5260299	protein_coding	Camk1d	exon	ENSMUSG00000039145	NonProperStrand	15	chr16	23110828	23110867	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.0842
chr18	41356147	41356184	miRNA	Mir5097	dead	ENSMUSG00000093361	ProperStrand	221	chr3	123210881	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-1.6406
chr7	4097614	4097664	protein_coding	Leng8	utr3	ENSMUSG00000035545	ProperStrand	49	chr9	15118332	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-6.4910
chr1	192001834	192001851	antisense	Gm17566	.	ENSMUSG00000079045	ProperStrand	15	chr16	23110828	23110957	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.0842
chr11	82256916	82256932	protein_coding	Tmem132e	exon	ENSMUSG00000020701	ProperStrand	21	chr4	140260112	140260156	protein_coding	Rcc2	intron	ENSMUSG00000040945	ProperStrand	228	1	-12.7649
chr5	35947957	35949755	protein_coding	Acox3	exon	ENSMUSG00000029098	ProperStrand	12	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.2270
chr12	17798096	17798171	protein_coding	Hpcal1	utr3	ENSMUSG00000071379	ProperStrand	51	chr11	69481334	69481416	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-5.9609
chr13	56197620	56197720	protein_coding	H2afy	intron	ENSMUSG00000015937	ProperStrand	103	chr9	120039568	120039622	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-4.1966
chr12	79436592	79436682	protein_coding	Gphn	intron	ENSMUSG00000047454	ProperStrand	9	chr7	54443075	54443155	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-13.6170
chr14	51427119	51427173	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr11	95633168	95633203	protein_coding	Zfp652	utr3	ENSMUSG00000075595	ProperStrand	48	2	-12.2583
chr13	58278362	58278462	protein_coding	Ubqln1	utr3	ENSMUSG00000005312	ProperStrand	49	chr16	23111452	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.5489
chr9	64981508	64981525	protein_coding	Igdcc4	exon	ENSMUSG00000032816	NonProperStrand	36	chr3	123210885	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-7.5922
chr16	37384897	37384913	protein_coding	Stxbp5l	utr5	ENSMUSG00000022829	ProperStrand	332	chr5	31117166	31117183	protein_coding	Mapre3	utr5	ENSMUSG00000029166	NonProperStrand	19	1	-12.2175
mmu-miR-1291	0	17	miRNA	mmu-miR-1291	.	mmu-miR-1291	ProperStrand	103	chr4	131908689	131908771	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-1.2595
chr2	72243878	72243894	protein_coding	B230120H23Rik	utr3	ENSMUSG00000004085	NonProperStrand	26	chr11	68599138	68599213	protein_coding	Myh10	exon	ENSMUSG00000020900	ProperStrand	91	1	-14.1716
chr11	62416574	62416597	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr15	34370545	34370618	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-0.9051
chr8	125626932	125626954	protein_coding-noncoding	Rpl13	utr5	ENSMUSG00000000740	ProperStrand	9	chr9	120038610	120038672	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-6.7394
chr5	122624981	122625012	protein_coding	Ppp1cc	utr3	ENSMUSG00000004455	NonProperStrand	2	chr4	131865865	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	NonProperStrand	39	1	-19.0965
chr18	10052132	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr6	120467088	120468467	protein_coding	Cecr5	exon	ENSMUSG00000058979	ProperStrand	97	1	-7.8410
chr3	83640687	83640709	protein_coding	Tlr2	exon	ENSMUSG00000027995	ProperStrand	3	chr16	23111389	23111466	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-inf
chr19	46513322	46513340	protein_coding	Sufu	intron	ENSMUSG00000025231	ProperStrand	6	chr2	4829164	4829180	protein_coding	Sephs1	utr3	ENSMUSG00000026662	NonProperStrand	271	1	-15.0384
chr8	98393501	98394735	protein_coding	Got2	exon	ENSMUSG00000031672	ProperStrand	85	chr10	23506278	23506303	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-6.2582
chr7	4959264	4959320	protein_coding	Fiz1	utr3	ENSMUSG00000061374	ProperStrand	37	chr14	52829460	52829479	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-9.1735
chr12	111891499	111891613	protein_coding	Dync1h1	intron	ENSMUSG00000018707	ProperStrand	648	chr16	87700688	87700705	protein_coding	Bach1	intron	ENSMUSG00000025612	NonProperStrand	20	1	-10.7755
chr2	71170097	71170187	protein_coding	Slc25a12	intron	ENSMUSG00000027010	NonProperStrand	7	chr8	48945621	48945701	protein_coding	Wwc2	intron	ENSMUSG00000031563	ProperStrand	37	1	-18.2968
chr4	68423440	68423456	protein_coding	Dbc1	exon	ENSMUSG00000028351	ProperStrand	78	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-3.1138
chr15	79193146	79193195	protein_coding	Tmem184b	exon	ENSMUSG00000009035	ProperStrand	37	chr2	32818841	32818941	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-6.4239
chr13	96102616	96102716	snoRNA	ENSMUSG00000077380_SNORA68	.	ENSMUSG00000077380	ProperStrand	51	chr17	24857818	24857853	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.5733
chr17	32197416	32197432	protein_coding	Rrp1b	exon	ENSMUSG00000058392	NonProperStrand	39	chr16	23110924	23111002	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.7347
chr2	71738659	71738759	protein_coding	Pdk1	utr3	ENSMUSG00000006494	ProperStrand	37	chr1	181027187	181027205	protein_coding	Smyd3	intron	ENSMUSG00000055067	ProperStrand	231	1	-11.5863
chr8	112387973	112387989	antisense	Gm17344	.	ENSMUSG00000078143	NonProperStrand	100	chr1	162965530	162965590	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.3792
chr14	62300066	62300083	lincRNA	Dleu2	intron	ENSMUSG00000087313	NonProperStrand	6	chr19	8963027	8963085	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-6.7266
chr16	23110892	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	chr11	68850998	68851073	tRNA	tRNA394-SerAGA	.	1716484	ProperStrand	1	1	-inf
chr19	32464273	32464289	lincRNA	2700046G09Rik	exon	ENSMUSG00000024893	ProperStrand	59	chr16	55967198	55967236	protein_coding	Rpl24	exon	ENSMUSG00000022601	ProperStrand	149	1	-11.5218
chr2	179322378	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr14	47399802	47399874	protein_coding	Cnih	exon	ENSMUSG00000015759	ProperStrand	10	2	-18.9415
chr8	13416897	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr1	53983259	53983276	protein_coding	Hecw2	exon	ENSMUSG00000042807	ProperStrand	39	1	-7.3115
chr4	151351335	151351351	protein_coding	Dnajc11	intron	ENSMUSG00000039768	NonProperStrand	16	chr2	145076805	145209253	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-10.4000
chr2	155843569	155843828	protein_coding	Ergic3	exon	ENSMUSG00000005881	ProperStrand	15	chr2	4544718	4544734	protein_coding	Prpf18	utr3	ENSMUSG00000039449	NonProperStrand	66	1	-15.9496
chr9	15071953	15071970	protein_coding	Med17	exon	ENSMUSG00000031935	ProperStrand	135	chr3	123210929	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-0.9056
chr4	71781190	71781230	protein_coding	Tle1	utr3	ENSMUSG00000008305	ProperStrand	16	chr11	55296259	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-8.8389
chr2	121079385	121079402	protein_coding	Trp53bp1	exon	ENSMUSG00000043909	ProperStrand	45	chr11	6428109	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.7211
chr1	36127700	36127800	protein_coding	Hs6st1	intron	ENSMUSG00000045216	ProperStrand	63	chr9	15118332	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.3772
chr12	111868136	111880348	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr2	26494715	26494842	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	3	-0.7122
chr14	56159295	56159312	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	chr11	69483136	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	5	-5.1566
chr15	98428804	98428820	protein_coding	Adcy6	exon	ENSMUSG00000022994	ProperStrand	50	chrX	7508209	7508271	protein_coding	Hdac6	exon	ENSMUSG00000031161	ProperStrand	42	1	-14.3973
chr5	65779803	65779883	protein_coding	Rpl9	utr3	ENSMUSG00000047215	ProperStrand	113	chr4	131865859	131865957	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.7963
chr2	90235298	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr14	75684545	75684561	protein_coding	Zc3h13	intron	ENSMUSG00000022000	NonProperStrand	8	1	-8.5166
chr10	16844327	16844346	LINE	L1_Mur1	L1	chr10L1_Mur116843303	ProperStrand	76	chr4	131865855	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.4149
chr2	157010253	157010273	protein_coding	Rbl1	intron	ENSMUSG00000027641	NonProperStrand	7	chr5	108336389	108336495	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	6	-inf
chr8	110108072	110108088	protein_coding	Psmd7	exon	ENSMUSG00000039067	ProperStrand	36	chr11	87172190	87172206	protein_coding	Ppm1e	exon	ENSMUSG00000046442	ProperStrand	112	1	-13.0954
chr6	94776857	94776875	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	chr2	144091716	144091816	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	ProperStrand	549	1	-4.7400
chr1	30891228	30891318	protein_coding	Phf3	intron	ENSMUSG00000048874	ProperStrand	102	chr2	26494765	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	3	-5.9173
chr12	86473758	86473858	protein_coding	Dlst	utr3	ENSMUSG00000004789	ProperStrand	52	chr15	79913288	79913345	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-3.8586
chr9	54768317	54768333	protein_coding	Agphd1	exon	ENSMUSG00000035878	NonProperStrand	19	chr2	166890504	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	4	-20.7491
chr18	75160180	75160847	protein_coding	Rpl17	utr5	ENSMUSG00000062328	ProperStrand	90	chr10	23505151	23505246	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-1.5223
chr8	13416897	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr11	59778161	59778177	protein_coding	Rasd1	exon	ENSMUSG00000049892	NonProperStrand	49	1	-6.8561
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	1	-4.7263
chr17	28465802	28465829	protein_coding	Rpl10a	exon	ENSMUSG00000037805	ProperStrand	121	chr4	131908809	131908892	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-2.6809
chr9	120039538	120039678	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	chr1	162968211	162968292	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	12	-2.9609
chr12	21330021	21330074	protein_coding	Adam17	utr3	ENSMUSG00000052593	ProperStrand	20	chr11	69481366	69481432	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.2928
chr1	88247741	88247877	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	chr16	38158093	38158226	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	2	-2.1349
chr12	59365873	59365891	protein_coding	Clec14a	utr3	ENSMUSG00000045930	ProperStrand	6	chr10	127521199	127521272	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	2	-19.6198
chr1	193925421	193925437	protein_coding	Rcor3	intron	ENSMUSG00000037395	ProperStrand	25	chr4	131826061	131826126	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	1	-10.9870
chr8	108210267	108210284	protein_coding	Rltpr	intron	ENSMUSG00000050357	NonProperStrand	22	chr4	131908363	131908418	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.0772
chr6	83880038	83880076	protein_coding	Zfml	exon	ENSMUSG00000030016	ProperStrand	45	chr1	162966007	162966041	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-6.9519
chr15	81737870	81737893	protein_coding	Aco2	exon	ENSMUSG00000022477	ProperStrand	237	chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	1	-6.3350
chr2	145076803	145209256	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	chr11	69483136	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	8	-0.8900
chr6	47225593	47225609	protein_coding	Cntnap2	intron	ENSMUSG00000039419	NonProperStrand	283	chr9	32068395	32068428	protein_coding	Arhgap32	exon	ENSMUSG00000041444	ProperStrand	37	1	-11.1795
chr12	117586280	117586773	protein_coding	Esyt2	exon	ENSMUSG00000021171	ProperStrand	19	chr1	89681185	89681265	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-7.7341
chr11	53583712	53584786	protein_coding	Irf1	utr5	ENSMUSG00000018899	ProperStrand	17	chr18	67650395	67650495	protein_coding	Spire1	utr3	ENSMUSG00000024533	ProperStrand	14	1	-22.5166
chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	chr19	8799021	8799074	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-2.9731
chr11	102927207	102927307	protein_coding	Nmt1	utr3	ENSMUSG00000020936	ProperStrand	43	chr9	15118326	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-4.0886
chr17	23953723	23953788	protein_coding	Srrm2	utr3	ENSMUSG00000039218	ProperStrand	521	chr4	116826517	116826928	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	1	-6.0617
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr4	22414139	22414155	protein_coding	Pou3f2	exon	ENSMUSG00000052621	NonProperStrand	90	1	-9.6143
chr2	26493366	26493479	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr15	71624614	71624642	snoRNA	ENSMUSG00000088895_SNORA81	.	ENSMUSG00000088895	ProperStrand	348	1	-0.9182
chr14	66154115	66154131	protein_coding	Elp3	intron	ENSMUSG00000022031	ProperStrand	71	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-7.4039
chr10	88228709	88228789	protein_coding	Utp20	intron	ENSMUSG00000004356	ProperStrand	45	chr6	115757992	115758082	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-6.0372
chr11	6520947	6521047	protein_coding	Tbrg4	exon	ENSMUSG00000000384	ProperStrand	24	chr16	23110984	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.3518
chr7	54110929	54110971	protein_coding	Ldha	utr3	ENSMUSG00000063229	ProperStrand	280	chr7	82600670	82600686	protein_coding	Akap13	intron	ENSMUSG00000066406	ProperStrand	80	1	-9.6480
chr13	84434506	84434555	protein_coding	Tmem161b	utr3	ENSMUSG00000035762	ProperStrand	22	chr10	110918635	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-5.3693
chr1	173288100	173288155	protein_coding	Pfdn2	exon	ENSMUSG00000006412	ProperStrand	9	chr19	8798523	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-9.0452
chr13	113789095	113789112	protein_coding	Gm6320	exon	ENSMUSG00000074651	ProperStrand	26	chr7	116663633	116663713	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.0328
chr4	118808353	118808444	protein_coding	Slc2a1	exon	ENSMUSG00000028645	ProperStrand	361	chr5	74489618	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	7	-9.2138
chr2	84530865	84531297	protein_coding	Zdhhc5	exon	ENSMUSG00000034075	NonProperStrand	144	chr11	48616641	48616658	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	1	-7.5980
chr2	9985901	9985917	protein_coding	Atp5c1	exon	ENSMUSG00000025781	ProperStrand	138	chrX	84483699	84483717	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-6.5937
chr2	119232635	119238193	protein_coding	Ino80	exon	ENSMUSG00000034154	ProperStrand	54	chr5	108336433	108336495	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-8.3788
chr9	48297944	48298071	protein_coding	Rbm7	exon	ENSMUSG00000042396	ProperStrand	2	chr16	23110986	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr12	77677256	77677356	protein_coding	Plekhg3	exon	ENSMUSG00000052609	ProperStrand	19	chr11	97642952	97643006	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.5938
chr19	5796428	5801807	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr7	116663630	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	10	-1.4596
chr9	78023109	78023150	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr2	181020979	181021055	protein_coding	Gmeb2	intron	ENSMUSG00000038705	ProperStrand	10	1	-9.5070
chr5	24348217	24348307	protein_coding	Rheb	utr5	ENSMUSG00000028945	ProperStrand	8	chr8	73201890	73201970	protein_coding	Lsm4	exon	ENSMUSG00000031848	ProperStrand	19	1	-18.7527
chr11	4820972	4820990	protein_coding	Thoc5	intron	ENSMUSG00000034274	ProperStrand	325	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-6.0154
chr1	155287313	155287355	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	chr8	73419657	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	4	-1.7970
chr11	109960582	109960672	LINE	L1VL4	L1	chr11L1VL4109960240	ProperStrand	1	chrX	101947870	101947950	LINE	Lx	L1	chrXLx101947844	ProperStrand	1	1	-inf
chr8	32222527	32222606	protein_coding	Rnf122	utr5	ENSMUSG00000039328	ProperStrand	3	chr11	6520366	6520456	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	2	-inf
chr4	141139025	141139058	protein_coding	Fblim1	exon	ENSMUSG00000006219	ProperStrand	26	chr18	32405206	32405222	protein_coding	Ercc3	exon	ENSMUSG00000024382	ProperStrand	280	1	-11.9176
chr4	137773343	137775989	protein_coding	Hp1bp3	intron	ENSMUSG00000028759	ProperStrand	21	chr16	23110869	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	7	-13.7965
chr18	34474221	34474247	protein_coding	Apc	exon	ENSMUSG00000005871	ProperStrand	64	chr9	108958590	108958884	protein_coding	Shisa5	exon	ENSMUSG00000025647	ProperStrand	43	12	-20.1165
chr12	105940942	105940999	protein_coding	Dicer1	exon	ENSMUSG00000041415	ProperStrand	61	chr16	23111465	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.2363
chr11	83306744	83306824	protein_coding	Taf15	intron	ENSMUSG00000020680	ProperStrand	60	chr9	15119636	15119726	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	10	-20.7036
chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	chr11	106362639	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	2	-6.1272
chrX	71043629	71044110	protein_coding	Pdzd4	exon	ENSMUSG00000002006	ProperStrand	20	chr7	28146782	28146798	protein_coding	Spnb4	exon	ENSMUSG00000011751	NonProperStrand	84	1	-14.8668
chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr9	64143747	64143875	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	4	-0.9345
chr9	65127126	65127142	protein_coding	Cilp	exon	ENSMUSG00000042254	ProperStrand	212	chr5	108336363	108336408	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-2.5578
chr18	75161136	75161173	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	chr11	55296230	55296330	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-2.2011
chr4	101298358	101300681	protein_coding	Dnajc6	exon	ENSMUSG00000028528	ProperStrand	10	chr4	151660827	151660843	protein_coding	Hes3	utr3	ENSMUSG00000028946	ProperStrand	3	1	-inf
chr9	78023195	78023245	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr2	130109497	130109513	protein_coding	Idh3b	exon	ENSMUSG00000027406	ProperStrand	146	1	-4.1625
chr6	54379743	54379760	lincRNA	9130019P16Rik	exon	ENSMUSG00000073067	ProperStrand	255	chr1	94755315	94755363	protein_coding	Gpc1	utr3	ENSMUSG00000034220	ProperStrand	30	1	-11.8139
chr7	139802386	139802413	protein_coding	Lhpp	utr5	ENSMUSG00000030946	ProperStrand	35	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-9.6778
chr3	159502831	159502850	protein_coding	Wls	utr5	ENSMUSG00000028173	NonProperStrand	35	chr11	97643144	97643674	protein_coding	Rpl23	exon	ENSMUSG00000071415	ProperStrand	920	2	-14.1986
chr17	34167804	34167843	protein_coding	Slc39a7	exon	ENSMUSG00000024327	ProperStrand	39	chr8	129468837	129468879	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-5.2462
chr18	32047765	32047855	protein_coding	Wdr33	exon	ENSMUSG00000024400	ProperStrand	48	chr2	32818851	32818931	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-5.9086
chr13	17901432	17901501	snRNA	ENSMUSG00000065166_U6	.	ENSMUSG00000065166	ProperStrand	6	chr1	162967549	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-13.1797
chr2	93426507	93426527	Low_complexity	GC_rich	Low_complexity	chr2GC_rich93426496	NonProperStrand	1	chr6	83111671	83111687	protein_coding	1700003E16Rik	exon	ENSMUSG00000030030	ProperStrand	352	1	-inf
chr17	33960231	33961289	protein_coding	Rps28	exon	ENSMUSG00000067288	ProperStrand	52	chr18	33954843	33954923	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-3.7708
chr6	39348179	39348257	protein_coding	Mkrn1	utr3	ENSMUSG00000029922	ProperStrand	177	chr11	83254019	83254035	protein_coding	1700020L24Rik	exon	ENSMUSG00000035085	NonProperStrand	88	1	-10.3732
chr13	112550341	112553287	protein_coding	Map3k1	exon	ENSMUSG00000021754	ProperStrand	113	chr15	39673474	39673490	protein_coding	Dpys	exon	ENSMUSG00000022304	ProperStrand	27	1	-13.6619
chr19	23279305	23279395	LTR	ORR1C1	MaLR	chr19ORR1C123279249	NonProperStrand	1	chr19	23279144	23279223	SINE	B1_Mus1	Alu	chr19B1_Mus123279114	ProperStrand	1	1	-inf
chr9	15130911	15131005	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	chr7	148634804	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-0.7369
chr15	75893164	75893199	protein_coding	Scrib	exon	ENSMUSG00000022568	ProperStrand	154	chrX	40944841	40944857	protein_coding	Gm362	exon	ENSMUSG00000078320	ProperStrand	129	1	-9.8855
chr9	78023106	78023196	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr4	34769090	34769108	protein_coding	Zfp292	intron	ENSMUSG00000039967	NonProperStrand	4	3	-21.2099
chr14	116649206	116649222	protein_coding	Gpc5	intron	ENSMUSG00000022112	ProperStrand	21	chr15	79908957	79909010	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-7.5631
chr17	27725389	27725480	protein_coding	Nudt3	intron	ENSMUSG00000024213	ProperStrand	26	chr9	15119695	15119761	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	5	-17.3036
chr12	53648085	53648141	protein_coding	Arhgap5	intron	ENSMUSG00000035133	ProperStrand	16	chr2	26766794	26766854	snoRNA	ENSMUSG00000065258_SNORD24	.	ENSMUSG00000065258	ProperStrand	130	1	-14.4441
chr9	15119630	15119708	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	chr13	75905594	75905651	snoRNA	ENSMUSG00000077449_SNORA42	.	ENSMUSG00000077449	ProperStrand	26	4	-13.6072
chr14	80200470	80200487	LINE	L2a	L2	chr14L2a80200192	NonProperStrand	8	chr12	83538753	83538807	protein_coding	Sipa1l1	exon	ENSMUSG00000042700	ProperStrand	84	1	-16.7694
chr11	61075895	61075912	protein_coding	Aldh3a2	exon	ENSMUSG00000010025	ProperStrand	2	chr18	35716763	35716824	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-9.2832
chr7	19548850	19548867	lincRNA	Gm17370	exon	ENSMUSG00000092034	ProperStrand	8	chr7	52382752	52382832	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-10.8695
chr5	123857184	123857201	protein_coding	Mlxip	intron	ENSMUSG00000038342	ProperStrand	21	chr17	35089213	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-7.5760
chr11	120411374	120411390	protein_coding	Ppp1r27	utr3	ENSMUSG00000025129	NonProperStrand	3	chr9	54620776	54620848	protein_coding	Crabp1	utr3	ENSMUSG00000032291	ProperStrand	8	1	-20.4785
chr6	83757669	83757697	protein_coding	Paip2b	utr3	ENSMUSG00000045896	ProperStrand	19	chr6	124691242	124691303	protein_coding	Grcc10	utr5	ENSMUSG00000072772	ProperStrand	88	5	-19.4024
chr9	64148871	64148961	protein_coding	Tipin	exon	ENSMUSG00000032397	ProperStrand	32	chr2	26494720	26494800	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.2767
chr15	76541224	76541240	protein_coding	Lrrc14	utr5	ENSMUSG00000033728	ProperStrand	52	chr18	33954816	33954873	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-3.7708
chr11	60970743	60971872	protein_coding	Usp22	exon	ENSMUSG00000042506	ProperStrand	75	chr1	162965570	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.8761
chr5	75400782	75400872	protein_coding	Chic2	utr3	ENSMUSG00000029229	ProperStrand	5	chr8	129468748	129468828	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-9.4893
chr12	86610078	86610094	protein_coding	Mlh3	exon	ENSMUSG00000021245	ProperStrand	28	chr4	53579783	53579842	protein_coding	Slc44a1	utr3	ENSMUSG00000028412	ProperStrand	38	1	-15.7782
chr7	28041899	28041948	lincRNA	Gm15567	intron	ENSMUSG00000084974	ProperStrand	13	chr2	26493395	26493485	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-10.9788
chr6	97061038	97061130	protein_coding	A130022J15Rik	utr3	ENSMUSG00000035245	ProperStrand	4	chr19	8799835	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-10.5562
chr9	15119308	15119398	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	chr16	38158134	38158214	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	1	-1.1046
chr5	116021486	116024649	protein_coding	Gcn1l1	exon	ENSMUSG00000041638	ProperStrand	408	chr11	106362668	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	4	-12.1105
chr5	142459851	142633063	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	chr6	115757992	115758128	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	2	-5.0933
chr1	122018120	122018217	protein_coding	3110009E18Rik	utr5	ENSMUSG00000026388	ProperStrand	5	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-10.9963
chr17	80252210	80252229	protein_coding	Atl2	exon	ENSMUSG00000059811	ProperStrand	9	chr4	131908389	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.8019
chr16	21903994	21905191	protein_coding	Map3k13	exon	ENSMUSG00000033618	NonProperStrand	16	chr17	35299574	35299642	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-7.4021
chr17	79109937	79109959	protein_coding	Strn	intron	ENSMUSG00000024077	ProperStrand	8	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-11.8681
chr4	115670137	115670153	protein_coding	Faah	utr3	ENSMUSG00000034171	ProperStrand	26	chr8	98244314	98244347	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	1	-11.6812
chr5	25274266	25274315	protein_coding	Actr3b	intron	ENSMUSG00000056367	ProperStrand	32	chr2	26493424	26493494	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	7	-23.1719
chr4	88274843	88274860	protein_coding	C87499	exon	ENSMUSG00000038330	NonProperStrand	1	chrX	34622906	34623035	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-inf
chr19	30969167	30969184	protein_coding	Prkg1	exon	ENSMUSG00000052920	NonProperStrand	41	chr2	158185554	158185653	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	3	-16.3500
chr2	164620586	164620656	protein_coding	Acot8	exon	ENSMUSG00000017307	ProperStrand	9	chr4	131908688	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.5343
mmu-miR-677-3p	7	24	miRNA	mmu-miR-677-3p	.	mmu-miR-677-3p	ProperStrand	5	chr11	69483142	69483242	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-7.3324
chr18	32405206	32405223	protein_coding	Ercc3	exon	ENSMUSG00000024382	ProperStrand	280	chr7	67123712	67123776	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	1	-6.4741
chr4	43505771	43505861	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr18	78019771	78019977	protein_coding	Atp5a1	exon	ENSMUSG00000025428	ProperStrand	254	1	-0.8535
chr16	17299534	17299600	protein_coding	Pi4ka	exon	ENSMUSG00000041720	ProperStrand	39	chr10	110918640	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-4.2557
chr2	57090809	57090827	protein_coding	Gpd2	utr5	ENSMUSG00000026827	ProperStrand	93	chr7	108971290	108971306	protein_coding	Inppl1	utr3	ENSMUSG00000032737	ProperStrand	272	1	-9.4041
chr8	73051744	73051761	protein_coding	Fkbp8	utr5	ENSMUSG00000019428	ProperStrand	52	chr19	8963086	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.5173
chr4	43551106	43551306	protein_coding	Tln1	exon	ENSMUSG00000028465	ProperStrand	101	chr9	59674959	59674993	protein_coding	Myo9a	exon	ENSMUSG00000039585	ProperStrand	27	1	-13.8838
chr13	24567316	24567369	protein_coding	Cmah	utr3	ENSMUSG00000016756	NonProperStrand	53	chr4	3762242	3762293	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	3	-19.2872
chr7	117189957	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	chr12	110887828	110887889	snoRNA	ENSMUSG00000084549_SNORD113	.	ENSMUSG00000084549	ProperStrand	196	5	-7.6539
chr7	82287268	82287286	protein_coding	Sv2b	intron	ENSMUSG00000053025	NonProperStrand	3	chr4	131908269	131908295	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-7.2242
chr5	144241587	144241639	protein_coding	Daglb	intron	ENSMUSG00000039206	ProperStrand	5	chr18	35714252	35714291	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	3	-18.8450
chr11	35521102	35521120	protein_coding	Slit3	intron	ENSMUSG00000056427	NonProperStrand	45	chr7	29136525	29136575	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.8631
chr13	37917286	37917304	protein_coding	Rreb1	intron	ENSMUSG00000039087	NonProperStrand	8	chr2	26494817	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-7.0621
chr1	167522915	167523005	protein_coding	Mpzl1	utr3	ENSMUSG00000026566	ProperStrand	27	chr5	108334196	108334276	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-6.3892
chr13	55235288	55235370	protein_coding	Zfp346	utr3	ENSMUSG00000021481	ProperStrand	22	chr12	112779152	112779242	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-6.7549
chr8	113447012	113447168	snoRNA	ENSMUSG00000065100_SNORA57	.	ENSMUSG00000065100	ProperStrand	81	chr19	8963027	8963183	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	24	-inf
chr2	66385173	66385189	protein_coding	Scn9a	exon	ENSMUSG00000075316	ProperStrand	58	chr11	95574232	95574301	protein_coding	Zfp652	intron	ENSMUSG00000075595	ProperStrand	48	1	-13.8329
chr10	12341172	12353751	protein_coding	Utrn	exon	ENSMUSG00000019820	ProperStrand	69	chr16	23110554	23110916	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.2265
chr5	143667274	143667361	protein_coding	Actb	exon	ENSMUSG00000029580	ProperStrand	446	chr9	64024533	64024567	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	1	-4.4321
chr10	61919195	61919285	protein_coding	Vps26a	utr3	ENSMUSG00000020078	ProperStrand	15	chr11	69481353	69481433	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	6	-inf
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr19	8800352	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	6	-2.0216
chr8	124120705	124120748	protein_coding	Map1lc3b	utr3	ENSMUSG00000031812	ProperStrand	57	chr4	57706987	57707003	protein_coding	Palm2	intron	ENSMUSG00000090053	NonProperStrand	187	1	-11.1362
chr8	87211593	87211683	protein_coding	Nacc1	utr5	ENSMUSG00000001910	NonProperStrand	3	chr9	15119297	15119377	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-11.4165
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr13	93962153	93962170	protein_coding	Papd4	utr5	ENSMUSG00000042167	NonProperStrand	2	1	-18.0510
chr15	12100610	12101555	protein_coding	Zfr	exon	ENSMUSG00000022201	ProperStrand	48	chr11	117673887	117673926	protein_coding	Syngr2	exon	ENSMUSG00000048277	ProperStrand	15	1	-16.5582
chr8	72705214	72705392	protein_coding	Tmem161a	exon	ENSMUSG00000002342	ProperStrand	42	chr18	12172461	12172477	protein_coding	6030446N20Rik	intron	ENSMUSG00000049411	ProperStrand	235	1	-11.2949
chr11	6519828	6519908	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	chr17	24856620	24856710	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-1.5500
chr14	102066519	102066619	protein_coding	Uchl3	utr3	ENSMUSG00000022111	ProperStrand	12	chr1	172612010	172612026	protein_coding	Olfml2b	exon	ENSMUSG00000038463	ProperStrand	57	1	-16.6442
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	45663926	45663943	protein_coding	Fbxw4	intron	ENSMUSG00000040913	NonProperStrand	6	1	-9.1372
chrX	47759016	47759100	snRNA	ENSMUSG00000064703_U6	.	ENSMUSG00000064703	ProperStrand	3	chr16	23111774	23111834	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-inf
chr3	137795129	137795146	protein_coding	Mttp	intron	ENSMUSG00000028158	NonProperStrand	2	chr16	23110840	23110860	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr8	83298498	83298560	protein_coding	Gab1	exon	ENSMUSG00000031714	ProperStrand	72	chr13	51743581	51743671	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	4	-19.0558
chr17	36000485	36000501	protein_coding	Nrm	exon	ENSMUSG00000059791	ProperStrand	253	chr5	116010890	116010983	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	1	-7.2768
chr4	125817423	125817520	protein_coding	Stk40	utr3	ENSMUSG00000042608	ProperStrand	32	chr16	23111777	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.9714
chr17	64647090	64647140	protein_coding	Pja2	exon	ENSMUSG00000024083	ProperStrand	27	chr16	23111778	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	5	-14.4663
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr13	114113333	114113350	protein_coding	BC067074	exon	ENSMUSG00000021763	NonProperStrand	62	1	-4.4001
chr1	58251605	58251621	protein_coding	Aox3	exon	ENSMUSG00000064294	ProperStrand	39	chr1	162966812	162966852	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	2	-11.4538
chr4	131908357	131908483	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	4	-3.7185
chr10	79354778	79354795	protein_coding	Cfd	exon	ENSMUSG00000061780	ProperStrand	18	chr4	131865866	131865967	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-6.6051
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr5	130297434	130297746	protein_coding	Cct6a	exon	ENSMUSG00000029447	ProperStrand	128	8	-inf
chr5	136707644	136707662	protein_coding	Sh2b2	exon	ENSMUSG00000005057	NonProperStrand	101	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-4.6648
chr4	43505820	43505900	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr17	12881870	12881960	protein_coding	Igf2r	exon	ENSMUSG00000023830	ProperStrand	151	1	-1.5436
chr4	116230385	116230401	protein_coding	Gpbp1l1	utr5	ENSMUSG00000034042	NonProperStrand	106	chr11	106362557	106362630	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-6.2770
chr10	90076969	90076990	protein_coding	Anks1b	intron	ENSMUSG00000058589	NonProperStrand	230	chr9	120039533	120039623	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.1482
chr1	154687267	154687303	protein_coding	Smg7	exon	ENSMUSG00000042772	ProperStrand	88	chr11	59025281	59025349	protein_coding	Arf1	utr3	ENSMUSG00000048076	ProperStrand	52	3	-20.2338
chr5	113143113	113143165	protein_coding	Myo18b	intron	ENSMUSG00000072720	ProperStrand	48	chr1	24620992	24621086	protein_coding	Gm10925	utr3	ENSMUSG00000090378	ProperStrand	320	3	-20.6319
chr12	76464430	76464446	protein_coding	Rhoj	intron	ENSMUSG00000046768	NonProperStrand	9	chr7	116664821	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-10.2063
chr3	132646003	132646020	protein_coding	Gstcd	utr3	ENSMUSG00000028018	ProperStrand	4	chr3	102861748	102861814	protein_coding	Csde1	utr3	ENSMUSG00000068823	ProperStrand	122	1	-17.5179
chr2	90533265	90533281	protein_coding	Nup160	exon	ENSMUSG00000051329	NonProperStrand	4	chr11	69483134	69483231	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-18.8087
chr6	134591531	134591548	protein_coding	Loh12cr1	intron	ENSMUSG00000042992	ProperStrand	16	chr5	151755615	151755632	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-10.4162
chr5	77704306	77709761	protein_coding	Rest	exon	ENSMUSG00000029249	ProperStrand	136	chr15	34370576	34370666	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	4	-7.9252
chr2	26788142	26788159	protein_coding	Surf4	intron	ENSMUSG00000014867	ProperStrand	16	chr17	24665465	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-7.5709
chr2	130109497	130109513	protein_coding	Idh3b	exon	ENSMUSG00000027406	ProperStrand	146	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-2.2146
chr1	175392124	175392161	protein_coding	Aim2	exon	ENSMUSG00000037860	ProperStrand	16	chr11	88361406	88361424	protein_coding	Msi2	intron	ENSMUSG00000069769	NonProperStrand	12	1	-20.0643
chr1	155080670	155081630	protein_coding	Lamc1	exon	ENSMUSG00000026478	ProperStrand	239	chr17	24665481	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	3	-6.3663
chr11	93954179	93954269	protein_coding	Spag9	exon	ENSMUSG00000020859	ProperStrand	23	chr1	63225578	63225658	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	2	-13.7044
chr14	87659491	87659512	LTR	MTEa	MaLR	chr14MTEa87659331	NonProperStrand	83	chr7	116664870	116664916	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.0079
chr2	84441402	84441492	protein_coding	Ctnnd1	utr3	ENSMUSG00000034101	ProperStrand	26	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-6.8655
chr16	88244835	88244854	protein_coding	Grik1	intron	ENSMUSG00000022935	NonProperStrand	20	chr5	54389950	54389967	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	1	-13.0094
chr15	102111330	102111390	protein_coding	Mfsd5	exon	ENSMUSG00000045665	ProperStrand	26	chr12	88778630	88778704	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-8.1714
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr4	124729665	124729712	protein_coding	Gnl2	exon	ENSMUSG00000028869	ProperStrand	23	1	-9.9088
chr10	93792250	93792267	protein_coding	Tmcc3	intron	ENSMUSG00000020023	ProperStrand	23	chr9	59334065	59334124	protein_coding	Arih1	exon	ENSMUSG00000025234	ProperStrand	75	1	-14.8076
chr12	58691976	58691992	antisense	4921518K17Rik	.	ENSMUSG00000085851	ProperStrand	75	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-4.9930
chr11	106677282	106677337	protein_coding	Ccdc45	intron	ENSMUSG00000018372	ProperStrand	17	chr11	5774114	5774132	protein_coding	Pold2	exon	ENSMUSG00000020471	ProperStrand	58	3	-inf
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	29953606	29953623	protein_coding	Zer1	utr3	ENSMUSG00000039686	NonProperStrand	2	1	-11.8388
chr6	91441292	91445448	protein_coding	Xpc	exon	ENSMUSG00000030094	ProperStrand	19	chr11	69483136	69483271	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	8	-inf
chr14	58729249	58729266	protein_coding	Fgf9	utr3	ENSMUSG00000021974	ProperStrand	11	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.8470
chr2	174241430	174245528	protein_coding	Th1l	exon	ENSMUSG00000016253	ProperStrand	40	chr16	23111372	23111441	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.8604
chr15	3229175	3229194	protein_coding	Sepp1	exon	ENSMUSG00000064373	NonProperStrand	4	chr3	68889149	68889202	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	3	-19.1276
chr18	34932464	34932494	protein_coding	Fam53c	utr3	ENSMUSG00000034300	ProperStrand	72	chr2	26493366	26493420	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	3	-8.5105
chr1	162965577	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr12	110923173	110923229	snoRNA	ENSMUSG00000084487_SNORD113	.	ENSMUSG00000084487	ProperStrand	183	1	-1.4307
chr9	49201472	49201490	protein_coding	Drd2	intron	ENSMUSG00000032259	ProperStrand	8	chr16	23111705	23111754	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.6662
chr12	109347731	109347790	protein_coding	Setd3	intron	ENSMUSG00000056770	ProperStrand	21	chr7	134671399	134671467	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-9.9913
chr10	127523164	127523365	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr1	88247836	88247867	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	2	-2.1526
chr8	4324892	4324909	protein_coding	Elavl1	utr5	ENSMUSG00000040028	NonProperStrand	20	chr8	98269959	98270083	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-7.7325
chr2	13091729	13091747	protein_coding	Rsu1	exon	ENSMUSG00000026727	ProperStrand	13	chr7	120019648	120019748	protein_coding	Tead1	exon	ENSMUSG00000055320	ProperStrand	217	1	-13.8565
chr2	26768049	26768123	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	chr11	69481332	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	7	-3.3211
chr5	65215468	65215530	protein_coding	Klf3	intron	ENSMUSG00000029178	NonProperStrand	2	chr15	80840879	80840896	protein_coding	Sgsm3	exon	ENSMUSG00000042303	NonProperStrand	2	1	-inf
chr8	85961925	85961941	protein_coding	Scoc	utr5	ENSMUSG00000063253	ProperStrand	23	chr16	23110839	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.4133
chr11	97889742	97889773	protein_coding	Rpl19	exon	ENSMUSG00000017404	ProperStrand	120	chr18	33954826	33954943	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-2.2845
chr8	47685167	47690492	protein_coding	Ccdc111	exon	ENSMUSG00000038225	ProperStrand	7	chr19	8799857	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	4	-20.8581
chrX	45916029	45916070	protein_coding	Zfp280c	intron	ENSMUSG00000036916	ProperStrand	4	chr15	73571981	73571998	protein_coding	Ptp4a3	intron	ENSMUSG00000059895	NonProperStrand	6	1	-19.4007
chr11	63885336	63887052	protein_coding	Cox10	exon	ENSMUSG00000042148	NonProperStrand	187	chr5	108334208	108334241	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-2.7194
chr18	35403791	35404367	protein_coding	Ctnna1	exon	ENSMUSG00000037815	ProperStrand	115	chrX	34622906	34623010	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-3.6958
chr1	24620839	24620865	protein_coding	Gm10925	utr3	ENSMUSG00000090378	ProperStrand	320	chr2	26494708	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	4	-3.3452
chr8	23679926	23679949	protein_coding	Slc20a2	utr3	ENSMUSG00000037656	ProperStrand	63	chr15	102313692	102314657	protein_coding	Pcbp2	intron	ENSMUSG00000056851	ProperStrand	164	1	-11.1977
chr2	90235294	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	39605591	39605695	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	3	-0.9201
chr7	135023024	135023099	protein_coding	Zfp646	exon	ENSMUSG00000049739	ProperStrand	29	chr8	73419657	73419682	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.4906
chr16	65540051	65540069	protein_coding	Chmp2b	utr3	ENSMUSG00000004843	NonProperStrand	2	chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-13.8971
chr12	17285346	17285376	protein_coding	Pdia6	exon	ENSMUSG00000020571	ProperStrand	114	chr16	23110454	23110508	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-2.7189
chr14	51427118	51427207	misc_RNA	AC027184.1	.	ENSMUSG00000092837	NonProperStrand	20	chr17	24857747	24857781	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	NonProperStrand	27	1	-17.0283
chr9	58317006	58317030	lincRNA	4930461G14Rik	exon	ENSMUSG00000086516	ProperStrand	9	chr16	23110828	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-5.3337
chr9	65044450	65044500	snRNA	ENSMUSG00000075763_U5	.	ENSMUSG00000075763	ProperStrand	216	chr2	158185544	158185644	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	23	-19.8892
chr7	3612516	3612545	protein_coding	Cnot3	utr3	ENSMUSG00000035632	ProperStrand	55	chr15	34370545	34370614	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-3.7104
chr5	115939522	115939612	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr5	108334204	108336492	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	2	-1.0950
chr7	106415669	106415685	lincRNA	Gm16890	exon	ENSMUSG00000084975	NonProperStrand	2	chr10	127152705	127152721	protein_coding	Myo1a	exon	ENSMUSG00000025401	ProperStrand	93	1	-20.0851
chr18	36753844	36753939	protein_coding	Ankhd1	utr5	ENSMUSG00000024483	ProperStrand	56	chr7	117190023	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.4587
chr15	51674099	51674141	protein_coding	Eif3h	exon	ENSMUSG00000022312	ProperStrand	45	chr19	8798507	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	3	-13.3878
chr14	20622407	20624523	protein_coding	Nid2	exon	ENSMUSG00000021806	ProperStrand	372	chr7	117189991	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	5	-4.4978
chr6	115758011	115758130	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr12	88778631	88778722	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	6	-3.5412
mmu-miR-6238	1	18	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr7	52381973	52382013	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	2	-6.7494
chr17	15842152	15842242	protein_coding	Chd1	utr5	ENSMUSG00000023852	ProperStrand	82	chr16	23111740	23111820	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.4298
chrX	34622906	34623037	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	chr7	16524110	16524217	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	6	-5.5659
chr4	151712956	151712973	protein_coding	Chd5	utr5	ENSMUSG00000005045	ProperStrand	51	chr1	185857228	185857244	protein_coding	1700056E22Rik	exon	ENSMUSG00000044854	ProperStrand	173	1	-11.5164
chr6	30580981	30580997	protein_coding	Cpa5	intron	ENSMUSG00000029788	ProperStrand	4	chr4	131908236	131908369	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-11.0940
chr3	153575089	153575169	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	chr10	23505150	23505282	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	16	-2.3484
chr2	168010000	168010100	protein_coding	Adnp	exon	ENSMUSG00000051149	ProperStrand	48	chr15	5068445	5068479	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-6.5082
chr9	20713615	20713634	protein_coding	Dnmt1	exon	ENSMUSG00000004099	ProperStrand	91	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.1658
chr11	62416635	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	chr17	71980620	71980681	snoRNA	ENSMUSG00000093289_Snord92	.	ENSMUSG00000093289	ProperStrand	56	1	-5.3006
chr7	30074412	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr17	25261590	25261606	protein_coding	Ptx4	exon	ENSMUSG00000044172	NonProperStrand	30	1	-11.8296
chr5	142927756	142927817	protein_coding	Foxk1	intron	ENSMUSG00000056493	ProperStrand	19	chr5	130300419	130300516	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.6362
chr3	88715213	88715230	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr9	15119972	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	6	-10.7534
chr4	132807545	132807562	protein_coding	Map3k6	exon	ENSMUSG00000028862	ProperStrand	3	chr8	73419699	73419789	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-9.3031
chr16	23110455	23110509	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	chr13	21947945	21947964	tRNA	tRNA81-ThrAGT	.	1070307	ProperStrand	3	1	-8.5395
chr4	133403989	133404005	protein_coding	Rps6ka1	exon	ENSMUSG00000003644	ProperStrand	68	chr1	162966813	162966843	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-6.0122
chr18	25623983	25624073	protein_coding	AW554918	utr3	ENSMUSG00000033632	ProperStrand	23	chr8	73419707	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.9417
chr11	94919526	94920690	protein_coding	Itga3	exon	ENSMUSG00000001507	ProperStrand	21	chr10	23505152	23505176	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.9252
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr12	82825859	82826720	protein_coding	Map3k9	exon	ENSMUSG00000042724	ProperStrand	92	1	-7.7392
chr18	35716999	35717020	lincRNA	Snhg4	exon	ENSMUSG00000090430	ProperStrand	270	chr15	79913288	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-2.2006
chr5	66043727	66043752	protein_coding	Pds5a	exon	ENSMUSG00000029202	ProperStrand	62	chr11	51551280	51551373	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	1	-7.6339
chr10	41172992	41173082	protein_coding	Zbtb24	intron	ENSMUSG00000019826	ProperStrand	17	chr1	34302611	34302691	protein_coding	Dst	intron	ENSMUSG00000026131	NonProperStrand	12	1	-19.1709
chr5	141000555	141000572	protein_coding	Chst12	exon	ENSMUSG00000036599	NonProperStrand	42	chr16	23110482	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-5.3364
chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	chr6	131330290	131330413	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	ProperStrand	408	1	-4.3566
chr13	46776602	46776939	protein_coding	Nup153	exon	ENSMUSG00000021374	ProperStrand	69	chr16	23111449	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.0727
chr15	80044590	80044703	protein_coding	Mgat3	utr3	ENSMUSG00000042428	ProperStrand	14	chr16	23110912	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-8.6732
chr18	30483242	30484206	protein_coding	Pik3c3	exon	ENSMUSG00000033628	ProperStrand	7	chr8	73419657	73419739	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-7.3719
chrX	91784505	91784595	protein_coding	Maged1	exon	ENSMUSG00000025151	ProperStrand	43	chr5	130295428	130295508	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-5.9014
chr1	16302439	16302458	protein_coding	Stau2	intron	ENSMUSG00000025920	NonProperStrand	3	chr4	41149353	41149398	protein_coding	Ubap2	exon	ENSMUSG00000028433	ProperStrand	292	1	-16.4928
chrX	39029536	39029552	protein_coding	Gria3	utr3	ENSMUSG00000001986	ProperStrand	32	chr2	152168879	152168979	protein_coding	Trib3	exon	ENSMUSG00000032715	ProperStrand	2	1	-inf
chr5	120128783	120128799	protein_coding	Tbx3	exon	ENSMUSG00000018604	NonProperStrand	2	chr16	23111474	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-8.0851
chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	chr11	6428077	6428169	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	6	-3.2462
chr2	90235300	90235324	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	80809668	80809684	protein_coding	Hmg20b	exon	ENSMUSG00000020232	ProperStrand	157	1	-2.6982
chr7	52084457	52084547	protein_coding	Nup62	exon	ENSMUSG00000043858	ProperStrand	47	chrX	34622914	34622994	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	9	-inf
chr10	61732504	61732543	protein_coding	Hk1	utr3	ENSMUSG00000037012	ProperStrand	84	chr4	131908687	131908798	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-1.6437
chr7	148636965	148637179	protein_coding	Rplp2	exon	ENSMUSG00000025508	ProperStrand	106	chr5	130295450	130295491	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-4.1569
chr12	84040062	84040078	protein_coding	Rgs6	intron	ENSMUSG00000021219	NonProperStrand	65	chrX	132673816	132673833	protein_coding	Bex4	intron	ENSMUSG00000047844	NonProperStrand	70	1	-12.8430
chr2	170337006	170337022	protein_coding	Pfdn4	utr5	ENSMUSG00000052033	ProperStrand	55	chr5	125368333	125368368	protein_coding	Zfp664	utr3	ENSMUSG00000079215	ProperStrand	47	1	-13.9854
chr6	66486077	66486094	protein_coding	Mad2l1	exon	ENSMUSG00000029910	ProperStrand	7	chr17	35089181	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	2	-15.7747
chr6	96322858	96322874	protein_coding	Fam19a1	intron	ENSMUSG00000059187	NonProperStrand	60	chr5	121655099	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-6.3402
chr3	96527940	96527956	protein_coding	Polr3c	exon	ENSMUSG00000028099	NonProperStrand	75	chr7	51505821	51505874	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	1	-8.1686
chr13	23647191	23647266	protein_coding	Hist1h1d	exon	ENSMUSG00000052565	ProperStrand	78	chrX	55284599	55284663	protein_coding	Zic3	exon	ENSMUSG00000067860	ProperStrand	21	1	-14.9046
chr15	48623472	48623489	protein_coding	Csmd3	utr5	ENSMUSG00000022311	ProperStrand	23	chr3	96132442	96132514	snRNA	ENSMUSG00000075978_U1	.	ENSMUSG00000075978	ProperStrand	132	1	-13.6697
chr4	43277116	43277179	protein_coding	Unc13b	utr3	ENSMUSG00000028456	ProperStrand	29	chrX	71517838	71517883	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	3	-17.8966
chr2	32564988	32565042	protein_coding	Cdk9	exon	ENSMUSG00000009555	ProperStrand	12	chr8	73419657	73419729	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-6.2451
chr10	82107448	82109988	protein_coding	Tdg	exon	ENSMUSG00000034674	ProperStrand	42	chr16	23111701	23111768	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.4934
chr11	62416575	62416654	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	chr8	32260335	32260435	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	10	-1.2552
chr2	90235299	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	108882283	108882299	protein_coding	Col7a1	exon	ENSMUSG00000025650	ProperStrand	33	1	-5.6244
chr1	167804031	167804049	protein_coding	Pou2f1	utr3	ENSMUSG00000026565	ProperStrand	34	chr14	76247711	76247778	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-5.2673
chr2	180748144	180748586	protein_coding	Col20a1	exon	ENSMUSG00000016356	ProperStrand	17	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-11.1499
chrX	34667269	34667285	protein_coding	Nkap	exon	ENSMUSG00000016409	NonProperStrand	133	chr14	76247775	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-4.7419
chr15	72933338	72933428	protein_coding	Eif2c2	utr3	ENSMUSG00000036698	ProperStrand	154	chr4	131908717	131908797	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-2.7953
chr11	80283884	80284132	protein_coding	Psmd11	exon	ENSMUSG00000017428	ProperStrand	34	chr4	102853012	102853030	protein_coding	Slc35d1	intron	ENSMUSG00000028521	ProperStrand	33	1	-15.6380
chr3	102867282	102867299	protein_coding	Nras	exon	ENSMUSG00000027852	NonProperStrand	2	chr2	158185603	158185655	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-13.9286
chr13	67034233	67034323	protein_coding	Ptdss1	utr5	ENSMUSG00000021518	ProperStrand	10	chr8	32260335	32260425	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	2	-13.2464
chr4	129526906	129526995	protein_coding	Ptp4a2	utr3	ENSMUSG00000028788	ProperStrand	27	chr2	167266058	167266085	protein_coding	Slc9a8	intron	ENSMUSG00000039463	ProperStrand	26	1	-16.6067
chr7	54442616	54442733	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	chr9	15119388	15119425	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	8	-16.8602
chr5	123244471	123252977	protein_coding	Anapc5	intron	ENSMUSG00000029472	ProperStrand	92	chr19	8963027	8963080	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-2.9683
chr2	32819098	32819291	protein_coding	Rpl12	exon	ENSMUSG00000038900	ProperStrand	167	chr11	101466276	101466351	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	2	-11.0024
chr11	120148960	120148976	protein_coding	Bahcc1	exon	ENSMUSG00000039741	NonProperStrand	268	chr5	108334268	108334322	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	2	-3.7861
chr5	108334195	108334256	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	chr1	173041632	173041649	tRNA	tRNA710-ValCAC	.	407629	ProperStrand	206	1	-2.5526
chr7	52309977	52309993	protein_coding	Prrg2	exon	ENSMUSG00000007837	NonProperStrand	281	chr10	80641710	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	1	-4.5275
chr9	120038468	120038558	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	chr1	129271707	129271746	snoRNA	ENSMUSG00000065687_snoU6-53	.	ENSMUSG00000065687	ProperStrand	78	1	-2.5779
chr12	81211168	81211248	protein_coding	Zfp36l1	exon	ENSMUSG00000021127	ProperStrand	12	chr8	73419657	73419747	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-6.2451
chr13	9833584	9833623	LINE	L1Md_T	L1	chr13L1Md_T9831266	NonProperStrand	15	chr11	6428077	6428155	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	NonProperStrand	91	1	-15.2984
chr7	142325616	142325642	protein_coding	Dock1	exon	ENSMUSG00000058325	ProperStrand	22	chr18	35716840	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-6.7225
chr5	122580412	122584741	protein_coding	Ccdc63	utr5	ENSMUSG00000043036	ProperStrand	120	chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	1	-10.2936
chr19	5798907	5798958	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr3	159502831	159502850	protein_coding	Wls	utr5	ENSMUSG00000028173	NonProperStrand	35	1	-8.6255
chr19	22601368	22601385	protein_coding	Trpm3	intron	ENSMUSG00000052387	NonProperStrand	16	chr7	116664812	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-5.0191
chr9	7760695	7760712	LTR	ETnERV2-int	ERVK	chr9ETnERV2-int7757860	NonProperStrand	1	chr9	15119647	15119768	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-inf
chr11	51419882	51419917	protein_coding	Hnrnpab	exon	ENSMUSG00000020358	ProperStrand	124	chr1	93342189	93345290	protein_coding	Per2	exon	ENSMUSG00000055866	ProperStrand	114	1	-10.5666
chr9	15119669	15119970	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	chr4	122968596	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	17	-1.3812
chrX	140808618	140808638	protein_coding-noncoding	Alg13	utr3	ENSMUSG00000041718	ProperStrand	87	chr12	70413651	70415416	protein_coding	Nemf	exon	ENSMUSG00000020982	ProperStrand	77	1	-12.0650
chr13	45485200	45485216	protein_coding	Mylip	utr5	ENSMUSG00000038175	ProperStrand	39	chr16	23110527	23110572	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-5.5465
chr9	79915104	79915120	protein_coding	Senp6	utr5	ENSMUSG00000034252	ProperStrand	110	chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-6.5362
chr17	24563854	24570137	protein_coding	Eci1	exon	ENSMUSG00000024132	ProperStrand	6	chr14	52829466	52829546	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-12.9564
chr9	21536197	21536303	protein_coding	Ldlr	exon	ENSMUSG00000032193	ProperStrand	60	chr18	33954921	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	3	-8.7283
chr11	50111621	50111643	protein_coding	Canx	exon	ENSMUSG00000020368	ProperStrand	296	chr5	100794982	100797365	protein_coding	Sec31a	exon	ENSMUSG00000035325	ProperStrand	61	1	-10.0814
chr4	144900562	144900581	protein_coding	Tnfrsf8	intron	ENSMUSG00000028602	ProperStrand	7	chr9	15118255	15118321	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-7.7405
chr9	40609362	40609404	protein_coding	Hspa8	utr5	ENSMUSG00000015656	ProperStrand	798	chr5	30522736	30522835	protein_coding	Gpr113	intron	ENSMUSG00000067642	ProperStrand	4	1	-13.8147
chr18	38001190	38001290	protein_coding	Pcdhga9	utr3	ENSMUSG00000023036	ProperStrand	245	chr15	79913288	79913346	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-1.2647
chr7	16795942	16795958	protein_coding	Dhx34	exon	ENSMUSG00000006019	NonProperStrand	7	chr11	62416950	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-10.4356
chr15	82980088	82980224	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr1	88247740	88247875	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	6	-4.1660
chr5	33169608	33169669	protein_coding	C330019G07Rik	exon	ENSMUSG00000054280	ProperStrand	22	chr3	68889026	68889126	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-5.1648
chr1	174042294	174042357	protein_coding	Copa	exon	ENSMUSG00000026553	ProperStrand	33	chr7	116664794	116664884	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.6237
chr19	31157628	31157644	protein_coding	Cstf2t	exon	ENSMUSG00000053536	ProperStrand	48	chr17	39985369	39985419	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-6.3727
chr4	134029294	134029369	protein_coding	Stmn1	utr3	ENSMUSG00000028832	ProperStrand	54	chr3	123210854	123210889	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.2397
chrX	131122009	131122052	protein_coding	Rpl36a	exon	ENSMUSG00000079435	ProperStrand	53	chr19	8798514	8798553	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-5.4535
chr11	116535914	116535982	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr4	98400244	98400285	protein_coding	L1td1	exon	ENSMUSG00000087166	ProperStrand	43	2	-10.6287
chr19	41992449	41992534	protein_coding	Pgam1	utr3	ENSMUSG00000011752	ProperStrand	124	chr11	97565132	97565173	protein_coding	Psmb3	exon	ENSMUSG00000069744	ProperStrand	26	2	-19.2963
chr10	94393406	94393422	protein_coding	Plxnc1	intron	ENSMUSG00000074785	NonProperStrand	11	chr2	130101241	130101308	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-10.0333
chr2	89368462	89368479	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	chr17	13112529	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-1.9476
chr7	16711196	16711300	protein_coding	Kptn	exon	ENSMUSG00000006021	NonProperStrand	5	chr3	123210910	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-11.4476
chr3	90016906	90016956	protein_coding	Rps27	exon	ENSMUSG00000090733	ProperStrand	40	chr9	15119645	15119734	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-5.7481
chr4	106770704	106770721	protein_coding	Cdcp2	intron	ENSMUSG00000047636	NonProperStrand	35	chrX	84483692	84483715	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-9.3328
chr10	94151578	94151595	protein_coding	Ccdc41	utr5	ENSMUSG00000020024	NonProperStrand	34	chr6	70794802	70794820	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	2	-19.0467
chr4	147475493	147475509	protein_coding	2610109H07Rik	utr3	ENSMUSG00000029005	NonProperStrand	46	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-9.4607
chr17	45705933	45706001	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr7	29136109	29137261	protein_coding	Rps16	exon	ENSMUSG00000037563	ProperStrand	191	1	-4.4748
chr11	54492452	54492470	protein_coding	Rapgef6	intron	ENSMUSG00000037533	ProperStrand	27	chr11	77995188	77995240	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-7.7765
chr6	83111671	83111687	protein_coding	1700003E16Rik	exon	ENSMUSG00000030030	ProperStrand	352	chr6	71832629	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-2.3390
chr5	130295409	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	chr10	39978305	39978437	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	11	-4.4483
chr8	97386534	97386744	protein_coding	Polr2c	exon	ENSMUSG00000031783	ProperStrand	16	chr9	120038564	120038644	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.5625
chr14	15572350	15572367	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr7	148634714	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	5	-10.5029
chr11	77744349	77744365	protein_coding	Sez6	utr5	ENSMUSG00000000632	NonProperStrand	8	chr8	26827320	26827337	protein_coding	Whsc1l1	utr3	ENSMUSG00000054823	NonProperStrand	17	1	-19.2278
chr5	133696488	133696510	DNA	RCHARR1	MER1_type	chr5RCHARR1133696128	ProperStrand	1	chr7	25670562	25673360	protein_coding	Rps19	exon	ENSMUSG00000040952	ProperStrand	101	1	-inf
chr17	94768315	94768333	LINE	L1_Mus3	L1	chr17L1_Mus394764195	ProperStrand	24	chr2	90235302	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	1	-6.2570
chr2	84886582	84886804	protein_coding	Ssrp1	exon	ENSMUSG00000027067	ProperStrand	118	chr1	89673711	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	2	-3.7607
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr6	38441550	38441569	protein_coding	Ubn2	exon	ENSMUSG00000038538	ProperStrand	86	1	-8.1195
chr3	156224612	156224628	lincRNA	4930570G19Rik	exon	ENSMUSG00000085084	ProperStrand	326	chr16	23110455	23110557	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-0.7091
chr6	47881127	47881217	protein_coding	Zfp212	exon	ENSMUSG00000052763	ProperStrand	20	chr6	71832606	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-7.8035
chr16	11074197	11074239	protein_coding	Snn	utr3	ENSMUSG00000037972	ProperStrand	6	chr16	23111776	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-6.2752
chr14	63760637	63760697	protein_coding	Ctsb	exon	ENSMUSG00000021939	ProperStrand	48	chr7	29136552	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.7493
chr8	13876112	13876160	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	chr5	147646410	147646462	snoRNA	ENSMUSG00000077185_SNORD102	.	ENSMUSG00000077185	ProperStrand	142	1	-5.4478
chr2	26746613	26746703	protein_coding	Surf6	utr3	ENSMUSG00000036160	ProperStrand	7	chr4	140257456	140257514	protein_coding	Rcc2	utr5	ENSMUSG00000040945	ProperStrand	228	1	-15.0616
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr2	158182180	158182297	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	4	-1.0115
chr8	110105109	110105175	protein_coding	Psmd7	exon	ENSMUSG00000039067	ProperStrand	36	chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	1	-12.7182
chr11	62153938	62182897	protein_coding	Ncor1	exon	ENSMUSG00000018501	ProperStrand	132	chr9	15119646	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	7	-11.8822
chr11	53213929	53230939	protein_coding	Aff4	exon	ENSMUSG00000049470	ProperStrand	94	chr16	23111373	23111463	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-3.6765
chr18	53405320	53405337	protein_coding	Snx24	utr5	ENSMUSG00000024535	NonProperStrand	14	chr11	69482365	69482386	snoRNA	ENSMUSG00000089542_snoU6-77	.	ENSMUSG00000089542	ProperStrand	138	1	-14.6162
chr19	6316552	6316892	protein_coding	Cdc42bpg	exon	ENSMUSG00000024769	ProperStrand	90	chr11	74718931	74718962	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	1	-8.2141
chr6	136672144	136672161	protein_coding	Gucy2c	intron	ENSMUSG00000042638	NonProperStrand	21	chr2	22444279	22444307	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-9.8953
chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr1	187066848	187066917	snoRNA	ENSMUSG00000077571_Snora36b	.	ENSMUSG00000077571	ProperStrand	244	3	-9.1915
chr12	88412895	88412912	protein_coding	Tmem63c	exon	ENSMUSG00000034145	ProperStrand	8	chr6	71832550	71832574	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-9.7064
chrX	10295748	10295788	protein_coding	Mid1ip1	exon	ENSMUSG00000008035	ProperStrand	27	chr16	23110913	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-3.7531
chrX	70473984	70474001	protein_coding	F8a	exon	ENSMUSG00000078317	ProperStrand	2	chr5	74489608	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-11.1084
chr3	152450610	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	chr1	162965978	162966024	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-0.8246
chr9	123763783	123763799	protein_coding	Xcr1	utr3	ENSMUSG00000060509	NonProperStrand	40	chr9	120037992	120038021	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-5.4940
chr11	115041755	115041795	protein_coding	Slc9a3r1	exon	ENSMUSG00000020733	ProperStrand	7	chr7	116664809	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-6.7161
chr17	47881268	47881314	protein_coding	Tfeb	intron	ENSMUSG00000023990	ProperStrand	78	chr5	108707764	108707818	protein_coding	Dr1	utr3	ENSMUSG00000029265	ProperStrand	11	1	-16.2200
chr6	124864085	124864129	protein_coding	Ptms	utr3	ENSMUSG00000030122	ProperStrand	21	chr7	52096726	52096742	protein_coding	Tbc1d17	exon	ENSMUSG00000038520	ProperStrand	20	4	-19.0956
mmu-miR-5100	5	20	miRNA	mmu-miR-5100	.	mmu-miR-5100	ProperStrand	132	chr18	35714144	35714261	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-2.0717
chr1	89105750	89105766	protein_coding	Chrng	exon	ENSMUSG00000026253	NonProperStrand	130	chr7	29136554	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.1826
chr2	90235304	90235327	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	14509464	14509481	protein_coding	Smoc2	intron	ENSMUSG00000023886	NonProperStrand	6	1	-9.1372
chr14	55476645	55476661	protein_coding	Homez	exon	ENSMUSG00000057156	NonProperStrand	127	chr19	8799581	8799636	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-5.2944
chr6	121423179	121423195	protein_coding	Iqsec3	utr5	ENSMUSG00000040797	NonProperStrand	139	chr14	76247709	76247753	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-2.6431
chr18	90616742	90616832	LTR	MTA_Mm	MaLR	chr18MTA_Mm90616497	NonProperStrand	1	chrX	72279349	72279439	protein_coding	Gab3	intron	ENSMUSG00000032750	ProperStrand	3	1	-inf
chr15	25736855	25736922	protein_coding	Myo10	exon	ENSMUSG00000022272	ProperStrand	168	chr11	62418014	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-3.5950
chr2	155845116	155845132	protein_coding	Fer1l4	exon	ENSMUSG00000013338	NonProperStrand	7	chr10	23505559	23505625	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-11.9647
chr11	30174149	30174229	lincRNA	Gm8098	intron	ENSMUSG00000073073	ProperStrand	1	chr11	31081942	31082032	pseudogene	Gm12106	.	ENSMUSG00000079890	NonProperStrand	1	1	-inf
chr10	79608250	79608340	protein_coding	Atp5d	utr3	ENSMUSG00000003072	ProperStrand	44	chr1	89673609	89673689	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-3.8362
chr2	150447346	150450729	protein_coding	Acss1	exon	ENSMUSG00000027452	ProperStrand	13	chr4	131908238	131908318	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.0703
chr3	142351261	142351279	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr1	183751589	183751689	protein_coding	Lbr	exon	ENSMUSG00000004880	ProperStrand	97	2	-11.0175
chr4	131908357	131908457	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr7	52381722	52381752	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-1.9109
chr2	27377714	27377766	protein_coding	Wdr5	intron	ENSMUSG00000026917	ProperStrand	81	chr2	174170995	174171036	protein_coding	Gnas	utr3	ENSMUSG00000027523	ProperStrand	41	4	-inf
chr12	111877966	111878115	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr2	74537355	74537371	protein_coding	Hoxd9	exon	ENSMUSG00000043342	ProperStrand	6	1	-13.3107
chr8	60437140	60437157	protein_coding	Galntl6	exon	ENSMUSG00000061864	ProperStrand	44	chr5	130300465	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.0546
chr3	122129389	122129489	protein_coding	Bcar3	exon	ENSMUSG00000028121	ProperStrand	21	chr16	23111451	23111500	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.9586
chr9	67801539	67801629	protein_coding	Vps13c	exon	ENSMUSG00000035284	ProperStrand	69	chr4	131908814	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.0398
chr1	79603762	79603842	protein_coding	Ap1s3	utr3	ENSMUSG00000054702	NonProperStrand	11	chr4	20060809	20060899	protein_coding	Nkain3	intron	ENSMUSG00000055761	NonProperStrand	4	1	-20.1343
chr2	18128403	18128419	protein_coding	Dnajc1	utr3	ENSMUSG00000026740	ProperStrand	10	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-10.9413
chr18	72025179	72025198	protein_coding	Dcc	intron	ENSMUSG00000060534	NonProperStrand	29	chr11	97643037	97643075	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.7822
chr2	181316563	181316579	protein_coding	Uckl1	exon	ENSMUSG00000089917	ProperStrand	142	chr5	74489588	74489604	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-2.2502
chr17	35384119	35384168	snoRNA	ENSMUSG00000065273_SNORD83	.	ENSMUSG00000065273	ProperStrand	244	chr18	35716810	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-1.5567
chr7	146684406	146684425	protein_coding	Inpp5a	intron	ENSMUSG00000025477	ProperStrand	166	chr4	19809370	19809388	protein_coding	Atp6v0d2	intron	ENSMUSG00000028238	ProperStrand	1	1	-inf
chr2	57090809	57090827	protein_coding	Gpd2	utr5	ENSMUSG00000026827	ProperStrand	93	chr16	23111695	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-2.4060
chr1	56852207	56852242	protein_coding	Satb2	utr3	ENSMUSG00000038331	ProperStrand	5	chr15	79913288	79913347	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-8.6129
chr10	77453465	77453565	protein_coding	Pfkl	exon	ENSMUSG00000020277	ProperStrand	179	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-1.7203
chr11	69483136	69483236	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	chr5	31190515	31190555	tRNA	tRNA109-TyrGTA	.	102682	ProperStrand	64	1	-2.3405
chr5	64582766	64582856	protein_coding	Tbc1d1	intron	ENSMUSG00000029174	ProperStrand	44	chr5	65533233	65533323	protein_coding	Klhl5	intron	ENSMUSG00000054920	NonProperStrand	1	1	-inf
chr1	4876844	4879559	protein_coding	Tcea1	exon	ENSMUSG00000033813	ProperStrand	24	chr17	24857750	24857830	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.9467
chr8	87525135	87525238	protein_coding	Hook2	exon	ENSMUSG00000052566	ProperStrand	204	chr15	98350248	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-2.5162
chr1	136523905	136523951	protein_coding	Kdm5b	utr5	ENSMUSG00000042207	ProperStrand	223	chr10	110918634	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	6	-9.2675
chr13	55189793	55189831	protein_coding	Uimc1	intron	ENSMUSG00000025878	ProperStrand	25	chr5	130295416	130295506	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	9	-19.5569
chr7	146684406	146684425	protein_coding	Inpp5a	intron	ENSMUSG00000025477	ProperStrand	166	chr5	144658116	144658364	protein_coding	Eif2ak1	exon	ENSMUSG00000029613	ProperStrand	37	1	-12.2474
chr5	87255759	87256982	protein_coding	Ythdc1	exon	ENSMUSG00000035851	ProperStrand	45	chr11	116938557	116938647	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-6.7291
chr13	103309709	103309799	LINE	L1M2a	L1	chr13L1M2a103309663	NonProperStrand	1	chr13	103309306	103309386	LINE	Lx8	L1	chr13Lx8103309002	NonProperStrand	1	1	-inf
chr2	90235315	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	9985901	9985917	protein_coding	Atp5c1	exon	ENSMUSG00000025781	ProperStrand	138	1	-2.9241
mmu-miR-3473b	1	18	miRNA	mmu-miR-3473b	.	mmu-miR-3473b	ProperStrand	33	chr8	13876096	13876227	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-8.3412
chr18	63109676	63109692	protein_coding	Apcdd1	exon	ENSMUSG00000071847	NonProperStrand	254	chr17	39985499	39985538	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-3.1928
chr17	35147862	35148248	protein_coding	Vars	exon	ENSMUSG00000007029	ProperStrand	121	chr15	10504979	10504995	protein_coding	Rai14	exon	ENSMUSG00000022246	ProperStrand	180	1	-9.7016
chr15	76002704	76002742	protein_coding	Plec	exon	ENSMUSG00000022565	ProperStrand	186	chr15	79908960	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-3.3296
chr3	116126898	116126914	protein_coding	Cdc14a	utr5	ENSMUSG00000033502	ProperStrand	29	chr16	23110828	23110858	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0921
chrX	159210159	159210194	protein_coding	Rbbp7	exon	ENSMUSG00000031353	ProperStrand	48	chr18	35716761	35716879	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.5460
chr1	163031632	163031732	protein_coding	Klhl20	exon	ENSMUSG00000026705	ProperStrand	11	chr1	162967541	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-6.7984
chr19	41288533	41288561	protein_coding	Tm9sf3	utr3	ENSMUSG00000025016	ProperStrand	21	chr17	24665429	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	2	-11.3440
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	2	-1.7700
chr6	46316483	46316502	protein_coding	Cntnap2	intron	ENSMUSG00000039419	NonProperStrand	283	chr7	117189863	117189933	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	3	-8.1530
chr4	117317816	117317890	protein_coding	Eri3	intron	ENSMUSG00000033423	ProperStrand	246	chr16	56035865	56035919	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	2	-9.9605
chr17	34089451	34089481	protein_coding	Rps18	exon	ENSMUSG00000008668	ProperStrand	111	chr18	35716697	35716787	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.2371
chr17	34055506	34055522	protein_coding	Zbtb22	exon	ENSMUSG00000051390	NonProperStrand	4	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-12.7696
chr10	127152705	127152721	protein_coding	Myo1a	exon	ENSMUSG00000025401	ProperStrand	93	chr6	148791692	148791739	protein_coding	Caprin2	exon	ENSMUSG00000030309	ProperStrand	12	1	-15.7188
chr7	92927469	92927549	LINE	L1_Mus1	L1	chr7L1_Mus192926002	NonProperStrand	1	chr7	92927885	92927975	LINE	L1_Mus1	L1	chr7L1_Mus192927905	NonProperStrand	1	1	-inf
chr10	62421652	62421752	protein_coding	Dna2	exon	ENSMUSG00000036875	ProperStrand	35	chr7	25673320	25673382	protein_coding	Rps19	exon	ENSMUSG00000040952	ProperStrand	101	15	-inf
chr4	43505793	43505873	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr4	106863154	106863244	protein_coding	Tmem59	exon	ENSMUSG00000028618	ProperStrand	29	10	-inf
chr9	58471599	58475643	protein_coding	Nptn	exon	ENSMUSG00000032336	ProperStrand	25	chr16	23110986	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.2939
chr5	140807832	140807849	protein_coding	Ftsj2	utr5	ENSMUSG00000029557	ProperStrand	11	chr1	162968442	162968497	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-9.5125
chr11	98019575	98019594	protein_coding	Med1	exon	ENSMUSG00000018160	NonProperStrand	13	chr2	130102055	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-8.4260
chr10	122568034	122568113	protein_coding	Usp15	exon	ENSMUSG00000020124	ProperStrand	24	chr9	123501530	123501620	protein_coding	Sacm1l	utr3	ENSMUSG00000025240	ProperStrand	12	1	-18.3968
chr7	119253776	119253792	protein_coding	Usp47	utr3	ENSMUSG00000059263	ProperStrand	40	chr12	109460710	109460726	protein_coding	Ccdc85c	intron	ENSMUSG00000084883	ProperStrand	157	1	-12.2022
chr11	104397919	104397935	protein_coding	Cdc27	exon	ENSMUSG00000020687	NonProperStrand	5	chr4	131865855	131865926	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-10.8861
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	1	-5.2936
chr4	43505828	43505918	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr13	23673467	23673502	protein_coding	Hist1h4d	utr5	ENSMUSG00000061482	ProperStrand	57	1	-3.1627
chr8	59966480	59966540	protein_coding	Sap30	utr5	ENSMUSG00000031609	ProperStrand	16	chr17	24857755	24857849	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.7325
chr9	108467256	108467447	protein_coding	Impdh2	exon	ENSMUSG00000062867	ProperStrand	74	chr18	35716761	35716786	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.8323
chr9	15119631	15119721	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	chr6	52589254	52589339	snoRNA	ENSMUSG00000064792_SNORA32	.	ENSMUSG00000064792	ProperStrand	151	2	-2.2967
chr8	87366897	87368004	protein_coding	Calr	exon	ENSMUSG00000003814	ProperStrand	232	chr9	15118329	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-1.2456
chr5	141110778	141111159	protein_coding	Ttyh3	exon	ENSMUSG00000036565	ProperStrand	22	chr16	23111466	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.8747
chr12	60141409	60141509	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	chr10	80641693	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	1	-1.5580
chr12	75040689	75040705	lincRNA	Gm15283	intron	ENSMUSG00000087700	ProperStrand	30	chr9	40762540	40762559	protein_coding	4931429I11Rik	intron	ENSMUSG00000032023	NonProperStrand	49	1	-15.1341
chr2	77742261	77743482	protein_coding	Cwc22	exon	ENSMUSG00000027014	ProperStrand	17	chr19	8800376	8800456	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-5.9706
chr9	120038467	120038552	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	chr9	64023678	64023746	snoRNA	ENSMUSG00000064918_SNORD18	.	ENSMUSG00000064918	ProperStrand	370	4	-2.7081
chr19	42038815	42040729	protein_coding	Mms19	exon	ENSMUSG00000025159	ProperStrand	52	chr4	116827162	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	4	-19.4102
chr12	8505203	8505293	protein_coding	Rhob	utr3	ENSMUSG00000054364	ProperStrand	10	chr16	23111417	23111497	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.3721
chr16	14190310	14192435	protein_coding	Nde1	exon	ENSMUSG00000022678	ProperStrand	23	chr11	6428103	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.0081
chr7	117189863	117189884	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr1	74415168	74415184	protein_coding	Gm216	exon	ENSMUSG00000073650	ProperStrand	33	1	-7.3994
chr9	121662196	121663364	protein_coding	Nktr	exon	ENSMUSG00000032525	ProperStrand	41	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.3878
chr11	100572143	100572192	protein_coding	Kat2a	exon	ENSMUSG00000020918	ProperStrand	68	chr11	62416968	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	3	-13.4023
chr15	96127832	96127848	protein_coding	Arid2	intron	ENSMUSG00000033237	NonProperStrand	13	chr11	6428088	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-6.1494
chr6	85416011	85416619	protein_coding	Cct7	exon	ENSMUSG00000030007	ProperStrand	173	chr11	69481344	69481434	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	4	-6.0072
chr13	69765953	69766027	protein_coding	Nsun2	exon	ENSMUSG00000021595	ProperStrand	110	chr2	26494710	26494800	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	5	-10.1290
chr17	47625728	47625745	protein_coding	Taf8	utr3	ENSMUSG00000023980	NonProperStrand	2	chr9	114329515	114330840	protein_coding	Glb1	exon	ENSMUSG00000045594	ProperStrand	67	1	-20.5851
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-1.3982
chr19	53458957	53459007	protein_coding	Smndc1	exon	ENSMUSG00000025024	ProperStrand	2	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-14.4340
chr4	148315521	148315789	protein_coding	Casz1	exon	ENSMUSG00000028977	NonProperStrand	23	chr5	149864552	149864606	protein_coding	Hmgb1	utr5	ENSMUSG00000066551	ProperStrand	99	1	-14.2491
chr14	105559798	105576256	protein_coding	Rbm26	exon	ENSMUSG00000022119	ProperStrand	60	chr16	23110950	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-2.3046
chrX	157630300	157639966	protein_coding	Scml2	exon	ENSMUSG00000000037	ProperStrand	13	chr17	24857787	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	6	-20.9333
chr11	69483173	69483237	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	NonProperStrand	35	chr13	96100551	96100651	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	NonProperStrand	8	1	-17.9876
chr6	71870678	71874605	protein_coding	Polr1a	exon	ENSMUSG00000049553	ProperStrand	109	chr17	24857740	24857820	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.3689
chr8	46334012	46334105	protein_coding	F11	exon	ENSMUSG00000031645	ProperStrand	21	chr9	40277237	40277254	protein_coding	Gramd1b	intron	ENSMUSG00000040111	NonProperStrand	12	1	-19.1087
chr7	3656361	3657387	protein_coding	Rps9	exon	ENSMUSG00000006333	ProperStrand	87	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-1.9105
chr4	137063749	137108816	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	chr17	24857717	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	8	-1.1918
chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	chr17	24665419	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	2	-2.5826
chr9	119536351	119539207	protein_coding	Scn10a	exon	ENSMUSG00000034533	ProperStrand	37	chr9	120039626	120039664	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-4.2212
chr12	33505376	33515035	protein_coding	Nampt	utr5	ENSMUSG00000020572	ProperStrand	15	chr19	8799052	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-8.6179
chr11	120681646	120681664	protein_coding	Fasn	exon	ENSMUSG00000025153	ProperStrand	298	chr3	68889071	68889146	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	7	-8.5969
chr19	42490411	42490428	protein_coding	Crtac1	intron	ENSMUSG00000042401	ProperStrand	26	chr5	121655027	121655096	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.3544
chr17	46395469	46395492	protein_coding	Tjap1	exon	ENSMUSG00000012296	ProperStrand	11	chrX	148315091	148315147	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	1	-12.5279
chr16	37777232	37815796	protein_coding	Fstl1	exon	ENSMUSG00000022816	ProperStrand	179	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-5.5699
chr5	34978380	34978699	protein_coding	Mfsd10	exon	ENSMUSG00000001082	ProperStrand	38	chr8	87543564	87543663	protein_coding	Asna1	intron	ENSMUSG00000052456	ProperStrand	25	1	-15.9952
chr4	3762432	3762648	protein_coding	Rps20	utr5	ENSMUSG00000028234	ProperStrand	71	chr5	108334229	108334329	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-4.4968
chr13	113342172	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	chr9	120039533	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	3	-1.1077
chr11	120421943	120421978	protein_coding	P4hb	utr3	ENSMUSG00000025130	ProperStrand	83	chr18	35714211	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	3	-7.3562
chr11	63701963	63701979	protein_coding	Hs3st3b1	utr3	ENSMUSG00000070407	ProperStrand	10	chr8	13876096	13876175	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-10.7933
chr17	56154364	56154464	protein_coding	Mpnd	exon	ENSMUSG00000003199	ProperStrand	71	chr10	39978273	39978309	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-5.1318
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr14	54860372	54860418	protein_coding	Dad1	utr3	ENSMUSG00000022174	ProperStrand	11	1	-11.4311
chr16	94681585	94681675	protein_coding	Ttc3	exon	ENSMUSG00000040785	ProperStrand	47	chr13	23790282	23790317	protein_coding	Hist1h4c	exon	ENSMUSG00000060678	ProperStrand	19	6	-inf
chr2	90235305	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	98939350	98939366	protein_coding	Pik3cb	utr3	ENSMUSG00000032462	NonProperStrand	3	1	-10.7414
chr7	82915790	82915827	LTR	RLTR19-int	ERVK	chr7RLTR19-int82915595	ProperStrand	10	chr13	49779747	49779803	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	3	-21.9285
chr1	88423327	88425782	protein_coding	Ptma	utr5	ENSMUSG00000026238	ProperStrand	385	chr5	74489543	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	4	-4.0230
chr4	21737939	21737963	protein_coding	Usp45	exon	ENSMUSG00000040455	ProperStrand	40	chr18	35714144	35714263	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	3	-10.1987
chr18	10052128	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr5	115939526	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	10	-18.7711
chr1	153602594	153602610	protein_coding	Edem3	utr5	ENSMUSG00000043019	ProperStrand	84	chr1	3661500	3661517	protein_coding	Xkr4	utr5	ENSMUSG00000051951	ProperStrand	59	1	-12.6724
chr14	77424372	77424388	protein_coding	9030625A04Rik	utr3	ENSMUSG00000044350	NonProperStrand	152	chr2	130103751	130103804	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-6.6234
chr9	63868723	63868739	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	chr11	116938556	116938637	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-1.8343
chr11	6428077	6428169	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	NonProperStrand	91	chr16	23110906	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	NonProperStrand	93	4	-19.6272
chr6	51417031	51417212	protein_coding	Hnrnpa2b1	exon	ENSMUSG00000004980	ProperStrand	166	chrX	92220974	92220992	protein_coding	Spin4	exon	ENSMUSG00000071722	NonProperStrand	14	1	-14.2424
chr8	87779916	87780006	SINE	B2_Mm2	B2	chr8B2_Mm287779936	ProperStrand	1	chr10	39688110	39688190	protein_coding	BC021785	utr3	ENSMUSG00000038528	NonProperStrand	13	1	-inf
chr8	13416896	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr7	25782210	25782297	protein_coding	Atp1a3	exon	ENSMUSG00000040907	ProperStrand	66	1	-6.2659
chr11	6255810	6255883	protein_coding	Ogdh	utr3	ENSMUSG00000020456	ProperStrand	42	chr18	35714217	35714292	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.1088
chr6	91685179	91689918	protein_coding	Slc6a6	exon	ENSMUSG00000030096	ProperStrand	206	chrX	156315499	156315519	protein_coding	Sh3kbp1	intron	ENSMUSG00000040990	ProperStrand	67	1	-10.6172
chr12	52472722	52473417	protein_coding	G2e3	exon	ENSMUSG00000035293	ProperStrand	53	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-11.9356
chr13	104815150	104825746	protein_coding	Nln	exon	ENSMUSG00000021710	ProperStrand	47	chr19	8800375	8800455	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-3.9853
chrX	71542600	71542991	protein_coding	Atp6ap1	exon	ENSMUSG00000019087	ProperStrand	11	chr11	68886967	68887047	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-7.5122
chr4	129031530	129031546	protein_coding-noncoding	Zbtb8os	utr3	ENSMUSG00000057572	ProperStrand	1	chr16	57391601	57391727	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	1	-inf
chr1	163171270	163171360	protein_coding	Prdx6	utr3	ENSMUSG00000026701	ProperStrand	23	chr2	26494803	26494826	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.9167
chr13	56731912	56731955	protein_coding	Tgfbi	exon	ENSMUSG00000035493	ProperStrand	9	chr4	131908687	131908792	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-7.7011
chr10	72437415	72437431	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr5	23281386	23281486	protein_coding	Pus7	intron	ENSMUSG00000057541	ProperStrand	23	1	-10.2519
chr17	71081256	71081273	protein_coding	Dlgap1	intron	ENSMUSG00000003279	NonProperStrand	36	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-6.8801
chr2	90235299	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr14	67488374	67488390	protein_coding	Gm5464	utr3	ENSMUSG00000075553	ProperStrand	1	1	-inf
chr19	15989461	15991594	protein_coding	Psat1	exon	ENSMUSG00000024640	ProperStrand	33	chr1	193602327	193602407	protein_coding	Lpgat1	exon	ENSMUSG00000026623	ProperStrand	31	1	-15.8227
chrX	34667269	34667285	protein_coding	Nkap	exon	ENSMUSG00000016409	NonProperStrand	133	chr5	151371663	151371699	protein_coding	Brca2	exon	ENSMUSG00000041147	ProperStrand	75	1	-11.2668
chr9	15118322	15118402	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	chr18	75161534	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	6	-18.1670
chr19	6261807	6261824	protein_coding	Atg2a	exon	ENSMUSG00000024773	ProperStrand	97	chr15	34370637	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-2.6872
chr19	11857619	11859888	protein_coding	Stx3	exon	ENSMUSG00000041488	ProperStrand	37	chr4	131908809	131908890	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.9439
mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr5	128076288	128076304	protein_coding	Slc15a4	utr3	ENSMUSG00000029416	ProperStrand	49	1	-6.3032
chr8	86535304	86535320	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	chr12	110874228	110874290	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	1	-8.1053
chr1	65422828	65422845	protein_coding	Pth2r	intron	ENSMUSG00000025946	ProperStrand	4	chr16	23111438	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-6.3168
chr6	37308462	37308479	protein_coding	Creb3l2	exon	ENSMUSG00000038648	NonProperStrand	5	chr4	131908251	131908298	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-6.0411
chr3	96073708	96073741	protein_coding	Hist2h2bb	exon	ENSMUSG00000050936	ProperStrand	57	chr11	62418048	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-5.6576
chr7	31358987	31359073	protein_coding	Wbp7	exon	ENSMUSG00000006307	ProperStrand	180	chr9	120038607	120038654	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.2685
chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	chr3	108357325	108357405	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-1.2398
chr2	18136570	18136635	protein_coding	Dnajc1	utr3	ENSMUSG00000026740	NonProperStrand	5	chr3	34550817	34550886	protein_coding	Sox2	utr3	ENSMUSG00000074637	ProperStrand	299	3	-18.9204
chr5	136748095	136748114	protein_coding	Cux1	intron	ENSMUSG00000029705	ProperStrand	19	chr8	13876096	13876208	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-9.4624
chr9	78023112	78023148	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr11	6519829	6519929	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-1.1574
chr4	131908355	131908474	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr5	130038419	130038436	protein_coding	Sfswap	intron	ENSMUSG00000029439	NonProperStrand	16	1	-9.9320
chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	chr16	57391761	57391792	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	1	-3.8091
chr13	9833553	9833615	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr4	138903707	138903866	protein_coding	Mrto4	exon	ENSMUSG00000028741	ProperStrand	40	2	-9.3895
chr11	70459293	70459345	protein_coding	Slc25a11	exon	ENSMUSG00000014606	ProperStrand	5	chr4	131908256	131908346	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-10.1894
chr6	54591363	54591425	protein_coding	Plekha8	utr3	ENSMUSG00000005225	ProperStrand	21	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.2792
chr2	103613153	103619387	protein_coding	Caprin1	exon	ENSMUSG00000027184	ProperStrand	145	chr4	131908689	131908807	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-1.3253
chr4	126045018	126045798	protein_coding	Eif2c3	exon	ENSMUSG00000028842	ProperStrand	8	chr9	63066908	63066926	protein_coding	Map2k5	intron	ENSMUSG00000058444	NonProperStrand	79	1	-16.8832
chr15	83917078	83920389	protein_coding	Sult4a1	exon	ENSMUSG00000018865	ProperStrand	8	chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	1	-12.6378
chr5	121654729	121654779	protein_coding	Rpl6	intron	ENSMUSG00000029614	ProperStrand	332	chr9	56775853	56775870	protein_coding	Snx33	utr5	ENSMUSG00000032733	NonProperStrand	116	1	-8.5651
chr4	134774525	134774560	protein_coding	Clic4	exon	ENSMUSG00000037242	ProperStrand	84	chr4	131908689	131908799	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.8029
chr9	44218079	44218232	protein_coding	Rps25	utr3	ENSMUSG00000009927	ProperStrand	42	chr17	35088999	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	2	-10.6348
chr4	151730301	151730737	protein_coding	Chd5	exon	ENSMUSG00000005045	NonProperStrand	147	chr9	78327896	78328069	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-4.5908
chr11	78086787	78086944	protein_coding	2610507B11Rik	exon	ENSMUSG00000010277	ProperStrand	246	chr4	61977228	61977277	protein_coding	Fkbp15	intron	ENSMUSG00000066151	ProperStrand	10	1	-14.1475
chr9	47369852	47369870	protein_coding	Cadm1	intron	ENSMUSG00000032076	ProperStrand	77	chr18	35716762	35716857	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-3.2516
chr18	35714163	35714263	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	chr2	18508668	18508716	tRNA	tRNA1947-AsnGTT	.	243892	ProperStrand	179	3	-4.5923
chr7	88591695	88591775	protein_coding	Cpeb1	intron	ENSMUSG00000025586	NonProperStrand	29	chr7	137412261	137412351	protein_coding	Fgfr2	intron	ENSMUSG00000030849	ProperStrand	100	1	-13.7618
chr8	23679321	23679355	protein_coding	Slc20a2	utr3	ENSMUSG00000037656	ProperStrand	63	chr5	135529896	135529986	snoRNA	ENSMUSG00000088008_SCARNA20	.	ENSMUSG00000088008	ProperStrand	139	7	-19.5509
chr12	114154561	114154648	protein_coding	Jag2	exon	ENSMUSG00000002799	ProperStrand	28	chr10	23505190	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.4185
chr5	115999814	115999835	protein_coding	Pxn	intron	ENSMUSG00000029528	NonProperStrand	3	chr14	76247711	76247773	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-10.4338
chrX	19683228	19683244	protein_coding	Slc9a7	exon	ENSMUSG00000037341	NonProperStrand	136	chr9	64022855	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-6.4012
chr8	77633499	77633667	protein_coding	Mcm5	utr5	ENSMUSG00000005410	ProperStrand	199	chr18	35714217	35714265	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-1.4421
chr14	124243064	124243085	protein_coding	Itgbl1	exon	ENSMUSG00000032925	ProperStrand	159	chr1	88247814	88247835	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-3.2624
chr7	151765212	151765228	antisense	Gm10574	.	ENSMUSG00000073778	ProperStrand	357	chr11	101320241	101320316	protein_coding	Vat1	utr3	ENSMUSG00000034993	ProperStrand	69	1	-9.4599
chr1	20922259	20922275	protein_coding	Paqr8	utr5	ENSMUSG00000025931	NonProperStrand	60	chr3	68889109	68889209	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	11	-21.3198
chr10	75202196	75202802	protein_coding	Cabin1	exon	ENSMUSG00000020196	NonProperStrand	4	chr12	106269284	106269336	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	NonProperStrand	38	2	-20.4279
chr11	62418013	62418038	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr4	41150095	41150158	snoRNA	ENSMUSG00000089265_SNORD121A	.	ENSMUSG00000089265	ProperStrand	370	1	-5.3745
chr14	35124244	35124346	protein_coding	Glud1	exon	ENSMUSG00000021794	ProperStrand	72	chr15	34370545	34370623	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-3.2160
chr13	75977361	75977413	protein_coding	Glrx	utr5	ENSMUSG00000021591	ProperStrand	7	chr11	69481387	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-7.4495
chr3	34549108	34549125	protein_coding	Sox2	utr5	ENSMUSG00000074637	ProperStrand	299	chr1	88252856	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-3.5518
chr19	5279487	5279577	protein_coding	Sf3b2	exon	ENSMUSG00000024853	ProperStrand	102	chr9	15118286	15118366	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-2.5230
chr2	27814042	27815971	protein_coding	Col5a1	exon	ENSMUSG00000026837	ProperStrand	35	chr11	6428039	6428119	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.1952
chr11	98557030	98557103	protein_coding	Psmd3	utr3	ENSMUSG00000017221	ProperStrand	51	chr11	32453026	32453042	protein_coding	Stk10	intron	ENSMUSG00000020272	NonProperStrand	73	1	-13.2473
chr15	84109473	84109489	protein_coding	Parvb	intron	ENSMUSG00000022438	NonProperStrand	6	chr11	106362638	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-12.1528
chr3	96218697	96218755	misc_RNA	Telomerase-vert	.	ENSMUSG00000064796	ProperStrand	443	chr11	6520321	6520421	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	1	-3.8321
chr19	5800705	5800766	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	1	-2.4780
chr7	117467272	117467310	protein_coding	Sbf2	intron	ENSMUSG00000038371	ProperStrand	17	chr7	116664870	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-4.8991
chr8	12757419	12769204	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr9	15119631	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	4	-0.6960
chr16	31871991	31872061	protein_coding	Dlg1	utr3	ENSMUSG00000022770	ProperStrand	69	chr19	8799858	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-4.6775
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	1	-5.4674
chrX	7141370	7141470	protein_coding	Ppp1r3f	intron	ENSMUSG00000039556	ProperStrand	23	chr7	118219574	118219604	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-6.0392
chr4	122969043	122970127	protein_coding	Pabpc4	exon	ENSMUSG00000011257	ProperStrand	85	chr2	26494765	26494824	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	3	-6.5837
chr19	42021408	42021528	protein_coding	Mms19	exon	ENSMUSG00000025159	ProperStrand	52	chr16	23110552	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.7088
chr9	22598207	22598223	protein_coding	Bbs9	exon	ENSMUSG00000035919	ProperStrand	51	chr19	7492231	7492253	protein_coding	2700081O15Rik	utr5	ENSMUSG00000053080	NonProperStrand	3	1	-inf
chr15	93399748	93399766	protein_coding	Prickle1	intron	ENSMUSG00000036158	NonProperStrand	7	chr7	117166721	117166781	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-9.1717
chr18	75427509	75427599	protein_coding	Dym	intron	ENSMUSG00000035765	ProperStrand	22	chr3	153575141	153575175	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	1	-10.5229
chr13	23555419	23555486	protein_coding	Btn1a1	intron	ENSMUSG00000000706	NonProperStrand	2	chr4	131865866	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-8.7800
chr13	59686933	59686950	protein_coding	Naa35	intron	ENSMUSG00000021555	NonProperStrand	12	chr11	114725591	114725620	protein_coding	Gprc5c	exon	ENSMUSG00000051043	ProperStrand	22	1	-19.0611
chr6	22258295	22258367	protein_coding	Fam3c	utr3	ENSMUSG00000029672	ProperStrand	13	chr11	77995202	77995237	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-9.2703
chr5	37064262	37064319	protein_coding	D5Ertd579e	utr5	ENSMUSG00000029190	ProperStrand	43	chr16	23110909	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-2.3110
chr14	65372755	65372889	snoRNA	ENSMUSG00000064442_SNORA36	.	ENSMUSG00000064442	ProperStrand	296	chr5	108336377	108336451	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	4	-7.5823
chr16	55145591	55145610	SINE	ID_B1	B4	chr16ID_B155145481	ProperStrand	1	chr9	15118322	15118365	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-inf
chr16	23111372	23111442	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	chr7	106628073	106628133	snoRNA	ENSMUSG00000064966_Snord15b	.	ENSMUSG00000064966	ProperStrand	74	2	-1.9576
chr1	90967163	90967182	protein_coding	Sh3bp4	utr5	ENSMUSG00000036206	NonProperStrand	2	chr7	116663633	116663748	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-9.6916
chr6	54379743	54379760	lincRNA	9130019P16Rik	exon	ENSMUSG00000073067	ProperStrand	255	chr15	79908930	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-2.7681
chr15	98428804	98428820	protein_coding	Adcy6	exon	ENSMUSG00000022994	ProperStrand	50	chr7	148634785	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-4.3314
chr11	65502856	65502903	protein_coding	Map2k4	utr3	ENSMUSG00000033352	ProperStrand	10	chr1	162966007	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-7.1350
chr6	87769189	87769558	protein_coding	Isy1	exon	ENSMUSG00000030056	ProperStrand	172	chr8	13416897	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-4.4080
chr7	3655970	3656050	protein_coding	Rps9	exon	ENSMUSG00000006333	ProperStrand	87	chr11	58115992	58116019	tRNA	tRNA1911-LeuCAA	.	172934	ProperStrand	165	1	-10.5366
chr2	26767586	26767654	protein_coding	Rpl7a	exon	ENSMUSG00000062647	ProperStrand	234	chr8	32260335	32260424	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-2.1725
chr2	63936035	63936053	protein_coding	Fign	utr5	ENSMUSG00000075324	ProperStrand	8	chr17	24857747	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	NonProperStrand	27	3	-19.1506
chr2	35030548	35030608	protein_coding	Cep110	intron	ENSMUSG00000057110	ProperStrand	20	chr5	121655031	121655121	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.8755
chr4	149021741	149021831	protein_coding	Clstn1	utr3	ENSMUSG00000039953	ProperStrand	173	chrX	71517831	71517911	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-4.4850
chr4	126386320	126386402	protein_coding	Psmb2	intron	ENSMUSG00000028837	ProperStrand	8	chr16	23111698	23111753	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.6662
chr9	78327184	78327255	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr18	12172461	12172477	protein_coding	6030446N20Rik	intron	ENSMUSG00000049411	ProperStrand	235	1	-3.7088
chr11	59566321	59566401	protein_coding	Mprip	exon	ENSMUSG00000005417	ProperStrand	58	chr15	82980102	82980192	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-7.2068
chr8	13416897	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr2	130103432	130103501	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	2	-3.0617
chr6	122269547	122269989	protein_coding	Phc1	exon	ENSMUSG00000040669	ProperStrand	158	chr7	150717345	150717425	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-3.6603
chr8	72856256	72856277	protein_coding	Upf1	utr3	ENSMUSG00000058301	ProperStrand	90	chr7	109085322	109085339	protein_coding	Numa1	intron	ENSMUSG00000066306	ProperStrand	148	1	-10.6861
chr19	8963221	8963239	miRNA	Mir5136	.	ENSMUSG00000093314	ProperStrand	45	chr16	23111708	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-4.2245
chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr5	103275232	103275249	protein_coding	Arhgap24	intron	ENSMUSG00000057315	ProperStrand	8	1	-10.5674
chr2	160191558	160191574	protein_coding	Mafb	exon	ENSMUSG00000074622	ProperStrand	31	chr9	15118276	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-7.8402
chr11	82692475	82692491	protein_coding	Rad51l3	exon	ENSMUSG00000018841	ProperStrand	112	chr1	162968443	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-4.8629
chr4	41688091	41688107	protein_coding	Sigmar1	exon	ENSMUSG00000036078	ProperStrand	11	chr18	82773672	82773688	protein_coding	Zfp236	exon	ENSMUSG00000041258	NonProperStrand	117	1	-15.4296
chr15	77356785	77356801	protein_coding	Apol7c	exon	ENSMUSG00000044309	ProperStrand	197	chr4	131865855	131865916	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-0.8159
chr4	32810072	32836599	protein_coding	Mdn1	exon	ENSMUSG00000058006	ProperStrand	184	chr4	131908265	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	8	-5.9213
chr3	157729963	157729979	protein_coding	Lrrc40	utr3	ENSMUSG00000063052	ProperStrand	147	chr17	35087938	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-3.5024
chr19	11853436	11859888	protein_coding	Stx3	exon	ENSMUSG00000041488	ProperStrand	37	chr10	23505151	23505266	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-5.4680
chr6	89267994	89268014	protein_coding	Plxna1	utr3	ENSMUSG00000030084	ProperStrand	233	chr7	148634716	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	3	-4.6903
chr6	146968100	146969883	protein_coding	Ppfibp1	exon	ENSMUSG00000016487	ProperStrand	11	chr14	76372304	76372394	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	1	-12.4538
chr17	75405098	75405147	protein_coding	Ltbp1	utr5	ENSMUSG00000001870	ProperStrand	136	chrX	71517870	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-4.9455
chr4	132806030	132806131	protein_coding	Map3k6	exon	ENSMUSG00000028862	NonProperStrand	28	chr9	15119967	15120036	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-8.7833
chr5	69958942	69959042	protein_coding	Guf1	utr3	ENSMUSG00000029208	ProperStrand	12	chr3	123210854	123210890	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.0354
chr5	122179865	122179918	protein_coding	Atxn2	intron	ENSMUSG00000042605	ProperStrand	83	chr10	127521199	127521270	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	4	-inf
chr11	102059002	102059058	protein_coding	Hdac5	exon	ENSMUSG00000008855	ProperStrand	45	chr19	8963074	8963164	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.7687
chr2	158184718	158184751	lincRNA	9430008C03Rik	exon	ENSMUSG00000085385	ProperStrand	1039	chr7	134671409	134671521	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-2.4513
chr7	117425433	117425505	protein_coding	Swap70	utr3	ENSMUSG00000031015	ProperStrand	47	chr16	23111694	23111784	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	9	-inf
chr4	84817801	84817891	LTR	RMER15	ERVL	chr4RMER1584817611	ProperStrand	1	chr4	86399670	86399748	protein_coding	Dennd4c	intron	ENSMUSG00000038024	NonProperStrand	9	1	-inf
chr6	31474317	31474387	protein_coding	Podxl	exon	ENSMUSG00000025608	ProperStrand	37	chr3	68889026	68889126	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-4.1568
chr13	34975923	34976023	protein_coding	Prpf4b	exon	ENSMUSG00000021413	ProperStrand	50	chr9	120039627	120039684	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.6542
chr7	109147114	109149338	protein_coding	Numa1	exon	ENSMUSG00000066306	ProperStrand	148	chr4	131908236	131908325	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	5	-3.5119
chr8	86192513	86192613	protein_coding	Ptger1	exon	ENSMUSG00000019464	NonProperStrand	2	chr4	131865929	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-8.7800
chr14	22446025	22448087	protein_coding	Myst4	exon	ENSMUSG00000021767	ProperStrand	151	chr17	24665420	24665500	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-3.2093
chr18	84848212	84848242	protein_coding	Cndp2	exon	ENSMUSG00000024644	ProperStrand	10	chr7	20011487	20011503	protein_coding	Mark4	exon	ENSMUSG00000030397	NonProperStrand	45	1	-17.6678
chr18	35064539	35064579	protein_coding	Etf1	utr3	ENSMUSG00000024360	ProperStrand	74	chr13	54763335	54763405	protein_coding	Faf2	utr3	ENSMUSG00000025873	ProperStrand	90	1	-12.0774
chr7	127801041	127801085	protein_coding	Uqcrc2	exon	ENSMUSG00000030884	ProperStrand	26	chr16	23111760	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.3497
chr12	70264170	70264250	LINE	Lx9	L1	chr12Lx970264163	ProperStrand	1	chr12	70263997	70264087	LTR	RMER16	ERVK	chr12RMER1670263973	ProperStrand	1	1	-inf
chr11	9031703	9031758	protein_coding	Upp1	exon	ENSMUSG00000020407	ProperStrand	73	chr13	34436854	34436870	protein_coding	Slc22a23	utr5	ENSMUSG00000038267	ProperStrand	95	1	-11.9956
chr7	52302403	52302493	protein_coding	Prr12	exon	ENSMUSG00000046574	ProperStrand	86	chr17	13112471	13112551	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-3.8978
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr19	11857619	11859888	protein_coding	Stx3	exon	ENSMUSG00000041488	ProperStrand	37	1	-9.7635
chr15	31524256	31525454	protein_coding	Cct5	exon	ENSMUSG00000022234	ProperStrand	116	chr3	68889134	68889224	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-2.1154
chr12	74204340	74204390	protein_coding	Six4	utr3	ENSMUSG00000034460	ProperStrand	33	chr2	144087348	144087438	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-7.7387
chr18	56867914	56868050	protein_coding	Lmnb1	exon	ENSMUSG00000024590	ProperStrand	176	chr11	98878375	98878398	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-4.2014
chr11	78026397	78026793	protein_coding	Supt6h	exon	ENSMUSG00000002052	ProperStrand	119	chr10	80641716	80641757	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	2	-10.0375
chr17	66485639	66485698	protein_coding	Ddx11	utr5	ENSMUSG00000035842	ProperStrand	22	chr2	26494712	26494802	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-8.2982
chr4	107877248	107877270	protein_coding	Zyg11a	exon	ENSMUSG00000034645	ProperStrand	19	chr19	8798743	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	4	-20.4263
chr12	55797769	55797878	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	chr5	121655016	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	5	-1.5958
chr13	17906527	17906549	LINE	Lx8	L1	chr13Lx817906143	ProperStrand	3	chr7	116663661	116663759	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-inf
chr10	84102589	84109579	protein_coding	Polr3b	exon	ENSMUSG00000034453	ProperStrand	41	chr12	106269338	106269428	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	9	-inf
chr8	113795884	113811974	protein_coding	Rfwd3	exon	ENSMUSG00000033596	ProperStrand	71	chr16	23110839	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	8	-6.0031
chr4	134899780	134899844	protein_coding	Srrm1	exon	ENSMUSG00000028809	ProperStrand	142	chr15	80087500	80087590	protein_coding	Atf4	exon	ENSMUSG00000042406	ProperStrand	6	1	-16.3887
chr10	91223600	91223620	LTR	RLTR12A	ERVK	chr10RLTR12A91223188	ProperStrand	4	chr7	116663633	116663692	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-7.9103
chr7	108440949	108440967	protein_coding	Atg16l2	intron	ENSMUSG00000047767	ProperStrand	121	chr1	24621377	24621428	protein_coding	Gm10925	intron	ENSMUSG00000090378	ProperStrand	320	1	-8.5542
chr10	20080843	20080860	protein_coding	Fam54a	utr3	ENSMUSG00000019992	ProperStrand	232	chr16	32906519	32906578	protein_coding	Fyttd1	utr3	ENSMUSG00000022800	ProperStrand	31	1	-11.9354
chr15	12195464	12196439	protein_coding	Mtmr12	exon	ENSMUSG00000039458	ProperStrand	16	chr6	115757992	115758082	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-8.1168
chr2	154691687	154692709	protein_coding	Raly	utr3	ENSMUSG00000027593	ProperStrand	116	chr18	35716794	35716811	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.1777
chr2	94100155	94100175	lincRNA	E530001K10Rik	intron	ENSMUSG00000075020	ProperStrand	1	chr19	46560392	46560408	protein_coding	Sufu	exon	ENSMUSG00000025231	NonProperStrand	10	1	-inf
chr7	52958453	52958469	protein_coding	Car11	exon	ENSMUSG00000003273	NonProperStrand	250	chr17	35089182	35089233	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	4	-9.8009
chr16	23110984	23111010	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr2	179914202	179914329	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	1	-5.4418
chr8	73871525	73871603	protein_coding	Myo9b	exon	ENSMUSG00000004677	ProperStrand	78	chr5	143648750	143650352	protein_coding	Fbxl18	exon	ENSMUSG00000066640	ProperStrand	64	1	-12.6553
chr4	45529398	45529416	protein_coding	Shb	intron	ENSMUSG00000044813	ProperStrand	32	chr11	69483194	69483236	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.5740
chr4	99424199	99424277	protein_coding	Alg6	intron	ENSMUSG00000073792	ProperStrand	7	chr3	123210854	123210933	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-6.1463
chr13	104979955	104982109	protein_coding	Trim23	exon	ENSMUSG00000021712	ProperStrand	4	chr9	120039544	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	3	-20.1204
chr5	108334204	108334284	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	chr6	125071782	125071873	snoRNA	ENSMUSG00000088208_SCARNA11	.	ENSMUSG00000088208	ProperStrand	113	1	-3.6235
chr5	74988012	74991109	protein_coding	Fip1l1	exon	ENSMUSG00000029227	ProperStrand	102	chr12	106269467	106269557	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-3.1595
chr17	80259130	80259202	protein_coding	Atl2	exon	ENSMUSG00000059811	ProperStrand	9	chr16	23111454	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-11.4045
chr4	117881878	117881940	protein_coding	Ptprf	utr3	ENSMUSG00000033295	ProperStrand	337	chr18	82662186	82662202	protein_coding	Mbp	intron	ENSMUSG00000041607	NonProperStrand	185	1	-7.6065
chr11	116535951	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr5	65685112	65687197	protein_coding	Rfc1	exon	ENSMUSG00000029191	ProperStrand	53	1	-6.1551
chrX	40944841	40944857	protein_coding	Gm362	exon	ENSMUSG00000078320	ProperStrand	129	chr11	6519810	6519905	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-6.4233
chr14	8977932	8978000	protein_coding	Pxk	intron	ENSMUSG00000033885	ProperStrand	5	chr17	39985304	39985394	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-11.0622
chr4	115484059	115484084	protein_coding	Atpaf1	utr3	ENSMUSG00000028710	ProperStrand	202	chr15	79913287	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-2.8680
chr11	100414998	100415014	protein_coding	Ttc25	exon	ENSMUSG00000006784	NonProperStrand	119	chr8	73420172	73421266	protein_coding	Rpl18a	exon	ENSMUSG00000045128	ProperStrand	394	1	-8.1737
chr16	21581094	21581184	protein_coding	Vps8	intron	ENSMUSG00000033653	ProperStrand	27	chr16	9892107	9892197	protein_coding	Grin2a	intron	ENSMUSG00000059003	ProperStrand	10	1	-18.6478
chr15	72932329	72932391	protein_coding	Eif2c2	utr3	ENSMUSG00000036698	ProperStrand	154	chr8	67632210	67632226	protein_coding	BC030870	exon	ENSMUSG00000074300	ProperStrand	2	1	-19.7712
chr4	108274636	108276030	protein_coding	Orc1	exon	ENSMUSG00000028587	ProperStrand	161	chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-4.5336
chr17	71231816	71231876	lincRNA	Gm16724	intron	ENSMUSG00000085916	ProperStrand	13	chr9	15118305	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-6.4467
chr1	162881205	162902013	protein_coding	Rc3h1	exon	ENSMUSG00000040423	ProperStrand	13	chr10	23505151	23505232	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-9.6524
chr19	5796092	5801333	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr11	69481332	69481473	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	12	-5.1281
chr16	13148179	13148197	protein_coding	Ercc4	exon	ENSMUSG00000022545	ProperStrand	5	chr17	12915106	12918205	protein_coding	Igf2r	exon	ENSMUSG00000023830	ProperStrand	151	1	-16.5816
chr2	158185530	158185644	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr9	120037899	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	9	-4.2781
chr6	114258054	114260527	protein_coding	Slc6a1	exon	ENSMUSG00000030310	NonProperStrand	147	chr8	73419657	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-4.6781
chr5	121656750	121657165	protein_coding	Rpl6	exon	ENSMUSG00000029614	ProperStrand	332	chr2	26768388	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-2.4291
chr13	56962398	56962414	protein_coding	Trpc7	exon	ENSMUSG00000021541	ProperStrand	50	chr6	87769189	87769558	protein_coding	Isy1	exon	ENSMUSG00000030056	ProperStrand	172	1	-11.5676
chr17	17705777	17705851	protein_coding	Lnpep	intron	ENSMUSG00000023845	ProperStrand	23	chr15	79913288	79913354	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-5.4333
chr3	68828139	68828158	protein_coding	Smc4	exon	ENSMUSG00000034349	ProperStrand	21	chr7	117189913	117190013	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-5.3375
chr4	117897408	117898460	protein_coding	Ptprf	exon	ENSMUSG00000033295	ProperStrand	337	chr9	15119633	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-0.7989
chr4	120568368	120568456	protein_coding	Rims3	utr3	ENSMUSG00000032890	ProperStrand	18	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-11.1063
chr5	115939500	115939612	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr13	51743666	51743703	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	2	-3.3236
chr10	99910008	99910098	protein_coding	Tmtc3	exon	ENSMUSG00000036676	ProperStrand	53	chr11	6428089	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	6	-17.9257
chr15	102328979	102329006	protein_coding	Pcbp2	utr3	ENSMUSG00000056851	ProperStrand	164	chr12	110874223	110874290	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	1	-7.9672
chr1	75419888	75419968	protein_coding	Speg	exon	ENSMUSG00000026207	ProperStrand	42	chrX	71197127	71197350	protein_coding	Hcfc1	exon	ENSMUSG00000031386	ProperStrand	424	1	-10.1155
chr10	75110880	75110944	protein_coding	Cabin1	exon	ENSMUSG00000020196	ProperStrand	62	chr12	88488443	88496424	protein_coding	Pomt2	exon	ENSMUSG00000034126	NonProperStrand	331	1	-9.8255
chr10	41201765	41202035	protein_coding	Mical1	exon	ENSMUSG00000019823	ProperStrand	7	chr16	23111723	23111803	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.9463
chr5	136724304	136724394	protein_coding	Cux1	utr3	ENSMUSG00000029705	ProperStrand	19	chr4	131908726	131908806	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.0948
chr1	93391296	93391312	protein_coding	Traf3ip1	utr5	ENSMUSG00000034292	ProperStrand	4	chr5	23031348	23031364	protein_coding	Srpk2	exon	ENSMUSG00000062604	ProperStrand	51	1	-23.8405
chr4	133164086	133164125	protein_coding	Zdhhc18	utr3	ENSMUSG00000037553	ProperStrand	51	chr10	107800724	107800815	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	8	-inf
chrX	84483698	84483732	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr11	115935746	115937022	protein_coding	Unc13d	exon	ENSMUSG00000057948	ProperStrand	89	1	-7.4624
chr11	102053836	102054133	protein_coding	G6pc3	exon	ENSMUSG00000034793	ProperStrand	5	chr1	71341491	71341508	protein_coding	Abca12	exon	ENSMUSG00000050296	NonProperStrand	143	1	-16.7253
chr11	52468729	52468750	LINE	L1ME2	L1	chr11L1ME252468527	ProperStrand	1	chr3	97911056	97915516	protein_coding	Notch2	exon	ENSMUSG00000027878	ProperStrand	86	1	-inf
chr12	52886908	52886924	protein_coding	Hectd1	exon	ENSMUSG00000035247	ProperStrand	41	chr1	102076761	102076790	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	1	-10.2022
chr2	24825186	24827046	protein_coding	Wdr85	exon	ENSMUSG00000026975	ProperStrand	323	chr1	162965980	162966003	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-0.9170
chr17	28737837	28739700	protein_coding	Srpk1	exon	ENSMUSG00000004865	ProperStrand	61	chr4	131865902	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-3.2108
chr9	114472364	114472454	protein_coding	Trim71	utr5	ENSMUSG00000079259	ProperStrand	162	chr5	130300423	130300503	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.0084
mmu-miR-6240	1	23	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr5	122691914	122691930	protein_coding	Hvcn1	utr3	ENSMUSG00000064267	ProperStrand	182	2	-6.3666
chr7	30231536	30231593	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	NonProperStrand	19	chr1	162965979	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	NonProperStrand	8	1	-18.8166
chr9	19452353	19452428	protein_coding	Zfp317	exon	ENSMUSG00000057551	ProperStrand	7	chr9	15118323	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-7.7405
chr17	6138911	6138928	protein_coding	Tulp4	exon	ENSMUSG00000034377	ProperStrand	164	chr5	108336363	108336420	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-3.0059
chr5	147647241	147647480	protein_coding	Rpl21	exon	ENSMUSG00000041453	ProperStrand	112	chr7	118219634	118219714	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-3.0208
chr15	99257790	99257836	protein_coding	Nckap5l	exon	ENSMUSG00000023009	ProperStrand	51	chr12	88488443	88496424	protein_coding	Pomt2	exon	ENSMUSG00000034126	NonProperStrand	331	1	-10.2185
chr10	89208182	89208200	protein_coding	Uhrf1bp1l	intron	ENSMUSG00000019951	NonProperStrand	55	chr1	162966189	162966233	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-7.7498
chr10	78002823	78002903	LINE	Lx5	L1	chr10Lx578002594	NonProperStrand	1	chr16	10617407	10617497	protein_coding	Clec16a	intron	ENSMUSG00000068663	ProperStrand	24	1	-inf
mmu-miR-6240	3	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr5	137969485	137969560	protein_coding	Gnb2	utr3	ENSMUSG00000029713	ProperStrand	23	3	-17.3376
chr5	64203925	64203942	protein_coding	0610040J01Rik	intron	ENSMUSG00000060512	ProperStrand	36	chr7	148634712	148634782	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-4.9644
chr15	96192384	96192817	protein_coding	Arid2	exon	ENSMUSG00000033237	ProperStrand	34	chr4	131908688	131908736	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.0811
chr4	154984086	154984104	lincRNA	Gm16023	exon	ENSMUSG00000086682	ProperStrand	25	chr7	13516162	13516206	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	1	-10.4341
chr13	9833569	9833673	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr7	25706910	25706950	protein_coding	Arhgef1	exon	ENSMUSG00000040940	ProperStrand	13	1	-8.0117
chr4	111928995	111929011	protein_coding	Skint3	intron	ENSMUSG00000070868	NonProperStrand	48	chr6	71832577	71832604	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-6.0498
chr2	157119950	157120991	protein_coding	Rpn2	exon	ENSMUSG00000027642	ProperStrand	363	chr7	72516010	72516059	protein_coding	Tjp1	utr5	ENSMUSG00000030516	ProperStrand	78	1	-9.1808
chr14	124378486	124378503	protein_coding	Fgf14	utr3	ENSMUSG00000025551	NonProperStrand	9	chrX	34622906	34622987	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-11.2589
chrX	7137957	7137974	protein_coding	Ppp1r3f	exon	ENSMUSG00000039556	ProperStrand	23	chr8	90211932	90211971	protein_coding	Zfp423	exon	ENSMUSG00000045333	ProperStrand	33	1	-16.3962
mmu-miR-5620-3p	0	17	miRNA	mmu-miR-5620-3p	.	mmu-miR-5620-3p	ProperStrand	1	chr18	33954821	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-inf
chr10	114943477	114943494	protein_coding	Lgr5	intron	ENSMUSG00000020140	NonProperStrand	13	chr9	120039533	120039557	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-6.2868
chr16	90753891	90753936	protein_coding	Urb1	exon	ENSMUSG00000039929	ProperStrand	71	chr9	15119358	15119425	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	2	-7.9148
chr8	47255714	47255814	protein_coding	4933411K20Rik	exon	ENSMUSG00000031631	ProperStrand	4	chr4	131865927	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.0048
chr8	97384206	97385641	protein_coding	Polr2c	exon	ENSMUSG00000031783	ProperStrand	16	chr9	120039569	120039659	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-5.8660
chr9	55404025	55428045	protein_coding	Scaper	utr5	ENSMUSG00000034007	ProperStrand	19	chr5	121655063	121655143	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.9783
chr10	79634787	79634818	protein_coding-noncoding	Cirbp	utr5	ENSMUSG00000045193	ProperStrand	6	chr4	116827117	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	5	-19.1872
chr13	62989389	62989405	protein_coding	Fbp1	utr5	ENSMUSG00000069805	ProperStrand	1	chr16	23110828	23110873	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	chr1	162965531	162965599	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	5	-2.6445
chr4	10300008	10300098	LTR	MTA_Mm	MaLR	chr4MTA_Mm10299689	NonProperStrand	1	chr3	40506786	40506866	protein_coding	Intu	utr3	ENSMUSG00000060798	ProperStrand	4	1	-inf
chr2	35949551	35949567	protein_coding	Lhx6	intron	ENSMUSG00000026890	NonProperStrand	17	chr9	120038560	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	3	-12.8778
chr7	16524094	16524136	protein_coding	Gltscr2	intron	ENSMUSG00000041560	ProperStrand	127	chr11	69483136	69483188	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.2825
chr4	86558404	86558423	protein_coding	Acer2	intron	ENSMUSG00000038007	NonProperStrand	1	chr4	141039732	141041515	protein_coding	Spen	exon	ENSMUSG00000040761	ProperStrand	161	1	-inf
chr16	20740064	20740081	protein_coding	Chrd	exon	ENSMUSG00000006958	NonProperStrand	8	chr11	6428108	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-7.1562
chr9	14554709	14554726	protein_coding	Fut4	utr3	ENSMUSG00000049307	NonProperStrand	19	chr4	131865855	131865904	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.7782
chr1	53924798	53924815	protein_coding	Hecw2	intron	ENSMUSG00000042807	ProperStrand	39	chrX	132673816	132673833	protein_coding	Bex4	intron	ENSMUSG00000047844	NonProperStrand	70	1	-13.8733
chr4	140723745	140723761	protein_coding	Fbxo42	exon	ENSMUSG00000028920	ProperStrand	91	chr3	123210901	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.4265
chr19	5797734	5797772	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	mmu-miR-1949	2	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	1	-2.6282
chr10	41978230	41978246	protein_coding	Foxo3	intron	ENSMUSG00000048756	NonProperStrand	4	chr2	26768390	26768433	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-11.2331
chr5	121655032	121655122	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	chr7	89110592	89110637	snoRNA	ENSMUSG00000089111_SNORA74	.	ENSMUSG00000089111	ProperStrand	7	1	-8.0440
chr4	118808427	118808462	protein_coding	Slc2a1	exon	ENSMUSG00000028645	ProperStrand	361	chr9	15119336	15119426	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-1.8773
chr18	78389831	78389848	protein_coding	Slc14a2	intron	ENSMUSG00000024552	ProperStrand	5	chr9	15119631	15119694	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-7.5411
chr19	8799022	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	chr8	73419657	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	16	-1.3417
chr16	96346450	96349045	protein_coding	Hmgn1	exon	ENSMUSG00000040681	ProperStrand	38	chr7	29136542	29136622	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	6	-17.1950
chr11	109528953	109529053	protein_coding	Prkar1a	utr3	ENSMUSG00000020612	ProperStrand	8	chr7	117190005	117190057	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-7.3098
chr13	23654046	23654103	protein_coding	Hist1h3e	exon	ENSMUSG00000069273	ProperStrand	30	chr7	116664794	116664886	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	4	-12.6312
chr4	76614453	76614470	protein_coding	Ptprd	intron	ENSMUSG00000028399	ProperStrand	198	chr1	88247757	88247778	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-2.8711
chr4	56910496	56910627	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	chr8	73419654	73419778	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	23	-6.2001
chrX	12687284	12687304	protein_coding	Usp9x	exon	ENSMUSG00000031010	ProperStrand	174	chr5	121655035	121655153	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	6	-11.8734
chr13	23653801	23653857	protein_coding	Hist1h3e	utr3	ENSMUSG00000069273	ProperStrand	30	chr2	26493392	26493474	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-5.0680
chr18	36447667	36447757	protein_coding	Pura	exon	ENSMUSG00000043991	ProperStrand	20	chr11	69481347	69481427	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-8.7435
chr7	31745882	31745964	protein_coding-noncoding	Lsr	utr3	ENSMUSG00000001247	ProperStrand	3	chr16	23110829	23110864	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-9.5778
chr14	71070450	71070470	protein_coding	Xpo7	exon	ENSMUSG00000022100	ProperStrand	109	chr5	108334261	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-3.6901
chr5	50381444	50381483	protein_coding	Gpr125	exon	ENSMUSG00000029090	ProperStrand	29	chr19	8800377	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-4.9121
chr17	13184993	13185010	protein_coding	Wtap	utr5	ENSMUSG00000060475	ProperStrand	119	chr19	9043949	9044354	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	3	-18.0993
chr9	110845682	110845740	protein_coding	Tdgf1	exon	ENSMUSG00000032494	ProperStrand	218	chr7	118219664	118219740	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	6	-11.8611
chr8	44278680	44278723	protein_coding	Triml2	exon	ENSMUSG00000091490	ProperStrand	32	chr1	88247838	88247876	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-6.3333
chr15	89184298	89184326	protein_coding	Lmf2	exon	ENSMUSG00000022614	ProperStrand	19	chr16	23111375	23111505	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	6	-17.5238
chr17	24497192	24497209	protein_coding	Abca3	intron	ENSMUSG00000024130	ProperStrand	20	chr5	108336363	108336422	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-7.0555
chr8	122465865	122465955	protein_coding	Usp10	exon	ENSMUSG00000031826	ProperStrand	98	chr17	35299553	35299633	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-3.8463
chr8	73849755	73849780	protein_coding	Myo9b	exon	ENSMUSG00000004677	ProperStrand	78	chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	2	-13.5811
chrX	34622904	34623037	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	chr3	123210851	123210985	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	114	-1.3381
chr3	25780837	25780854	protein_coding	Nlgn1	intron	ENSMUSG00000063887	NonProperStrand	37	chr11	6428108	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.0895
chr1	71672577	71672644	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr19	8799020	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-1.0558
chr6	118980975	118980999	protein_coding	Cacna1c	intron	ENSMUSG00000051331	ProperStrand	46	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-5.7198
chr10	20080843	20080860	protein_coding	Fam54a	utr3	ENSMUSG00000019992	ProperStrand	232	chr14	76247742	76247842	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-3.2891
chr1	123358522	123359680	protein_coding	Ccdc93	exon	ENSMUSG00000026339	ProperStrand	14	chr16	23110887	23110967	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.2008
chr10	85096541	85096559	protein_coding	Btbd11	exon	ENSMUSG00000020042	ProperStrand	13	chr18	35714144	35714259	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-6.4211
chr7	115258029	115258046	LINE	L1_Mus2	L1	chr7L1_Mus2115256645	ProperStrand	12	mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	1	-9.1521
chr11	83579385	83579415	protein_coding	Heatr6	exon	ENSMUSG00000000976	ProperStrand	67	chr7	118219574	118219673	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-6.6663
chr15	25901562	25901652	protein_coding	Fam134b	exon	ENSMUSG00000022270	ProperStrand	18	chr5	92485123	92485203	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	1	-11.1790
chr9	15514257	15514276	protein_coding	Slc36a4	exon	ENSMUSG00000043885	ProperStrand	94	chr6	115757991	115758049	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-4.6036
chr3	31019403	31019503	protein_coding	Skil	utr3	ENSMUSG00000027660	ProperStrand	23	chr10	23505559	23505602	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-9.4818
chr2	148545500	148545521	protein_coding	Napb	intron	ENSMUSG00000027438	ProperStrand	2	chr11	35853255	35853271	protein_coding	Odz2	exon	ENSMUSG00000049336	ProperStrand	106	1	-20.1541
chr7	87887981	87888006	protein_coding	Iqgap1	exon	ENSMUSG00000030536	ProperStrand	43	chr18	38116113	38116129	protein_coding	Rell2	exon	ENSMUSG00000044024	NonProperStrand	43	1	-14.6677
chr14	99701239	99701329	protein_coding	Klf5	exon	ENSMUSG00000005148	NonProperStrand	5	chr6	70805452	70805542	snoRNA	ENSMUSG00000065750_SNORA5	.	ENSMUSG00000065750	NonProperStrand	1	1	-inf
chr5	120128838	120130490	protein_coding	Tbx3	exon	ENSMUSG00000018604	ProperStrand	87	chr11	22920821	22920901	protein_coding	Fam161a	exon	ENSMUSG00000049811	ProperStrand	3	1	-18.9686
chr10	62043474	62043593	protein_coding	Ddx21	utr3	ENSMUSG00000020075	ProperStrand	137	chr2	26768406	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	2	-6.7376
chr11	94496306	94499852	protein_coding	Lrrc59	exon	ENSMUSG00000020869	ProperStrand	115	chr5	128081218	128081238	protein_coding	Slc15a4	intron	ENSMUSG00000029416	NonProperStrand	1	1	-inf
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr7	86460294	86460311	protein_coding	Abhd2	intron	ENSMUSG00000039202	ProperStrand	47	1	-6.3857
chr3	85448965	85456213	protein_coding	Pet112l	exon	ENSMUSG00000028085	ProperStrand	81	chr4	130330509	130335710	protein_coding	Pum1	exon	ENSMUSG00000028580	ProperStrand	131	1	-11.1422
chr2	76471660	76471676	protein_coding	Prkra	exon	ENSMUSG00000002731	NonProperStrand	65	chr7	52382014	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-6.5533
chr5	64301287	64301371	protein_coding	Rell1	utr3	ENSMUSG00000047881	ProperStrand	24	chr1	63225287	63225322	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	1	-10.6877
chr10	80641470	80642801	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr9	63042015	63042031	protein_coding	Map2k5	exon	ENSMUSG00000058444	ProperStrand	193	2	-6.4830
chr12	41464082	41464099	protein_coding	Dock4	exon	ENSMUSG00000035954	ProperStrand	41	chr19	8800360	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-7.1103
chr2	118960877	118960944	protein_coding	Rad51	utr3	ENSMUSG00000027323	ProperStrand	10	chr16	23110985	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.7978
chr2	156208463	156208489	LTR	ORR1B2-int	MaLR	chr2ORR1B2-int156208459	NonProperStrand	3	chr7	29136525	29136561	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-8.4253
chr8	107892078	107892178	protein_coding	Slc9a5	exon	ENSMUSG00000014786	ProperStrand	26	chr16	23110557	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.9778
chr4	118809454	118809544	protein_coding	Slc2a1	utr3	ENSMUSG00000028645	ProperStrand	361	chr11	116938569	116938649	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-2.7757
chr5	147394860	147394876	protein_coding	Gpr12	exon	ENSMUSG00000041468	NonProperStrand	20	chr11	62418013	62418041	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-7.7485
chr3	88603803	88603863	pseudogene	5830417I10Rik	.	ENSMUSG00000078684	ProperStrand	68	chr4	122968676	122968713	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-6.0341
chr15	79148376	79148392	protein_coding	Pla2g6	exon	ENSMUSG00000042632	NonProperStrand	9	chr17	39985321	39985354	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-9.7848
chr2	87455083	87455173	LINE	L1VL1	L1	chr2L1VL187452235	NonProperStrand	1	chr2	87455254	87455344	LTR	IAPEY2_LTR	ERVK	chr2IAPEY2_LTR87455234	ProperStrand	1	1	-inf
chr17	27697875	27700200	protein_coding	Hmga1	utr3	ENSMUSG00000046711	ProperStrand	180	chr4	131865856	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	8	-7.6776
chr10	76517686	76518332	protein_coding	Col18a1	exon	ENSMUSG00000001435	ProperStrand	287	chr18	35714218	35714293	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-1.8955
chr17	46395021	46395081	protein_coding	Tjap1	utr3	ENSMUSG00000012296	ProperStrand	11	chr15	5068428	5068478	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-9.5003
chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	chr11	69483136	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	5	-7.0125
chr10	82418134	82418159	LTR	MT2B2	ERVL	chr10MT2B282418137	NonProperStrand	12	chr11	62418046	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	2	-14.0798
chrX	13637228	13637318	LINE	L1_Mus2	L1	chrXL1_Mus213636302	ProperStrand	1	chrX	13637468	13637548	LINE	Lx5	L1	chrXLx513637398	NonProperStrand	1	1	-inf
chr19	56003755	56003771	protein_coding	Tcf7l2	intron	ENSMUSG00000024985	ProperStrand	103	chr15	102168918	102169075	protein_coding	Aaas	exon	ENSMUSG00000036678	ProperStrand	10	1	-15.8693
chr2	26768398	26768433	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	chr11	83107809	83107903	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	1	-1.5900
chr7	28110165	28110181	protein_coding	Ltbp4	exon	ENSMUSG00000040488	ProperStrand	91	chr2	158182160	158182241	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-4.2051
chr11	100924438	100924455	protein_coding	Atp6v0a1	utr3	ENSMUSG00000019302	NonProperStrand	5	chr11	51789760	51789808	protein_coding	Cdkn2aipnl	utr3	ENSMUSG00000020392	ProperStrand	18	1	-19.3659
chr12	67145497	67145577	LINE	L1_Mus3	L1	chr12L1_Mus367145245	NonProperStrand	1	chr5	135063504	135063594	protein_coding	Rfc2	intron	ENSMUSG00000023104	ProperStrand	8	1	-inf
chr11	78023301	78023340	protein_coding	Supt6h	intron	ENSMUSG00000002052	ProperStrand	119	chr2	26493392	26493473	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	3	-6.6135
chr1	24620867	24621476	protein_coding	Gm10925	utr3	ENSMUSG00000090378	ProperStrand	320	chr16	23111375	23111499	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	7	-1.5916
chr10	79711930	79711982	protein_coding	Ndufs7	utr5	ENSMUSG00000020153	ProperStrand	15	chr4	131866180	131866280	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	8	-inf
chr13	94268257	94268274	protein_coding	Jmy	exon	ENSMUSG00000021690	ProperStrand	16	chr14	76247753	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-6.7721
chr11	117923858	117923948	protein_coding	Dnahc17	intron	ENSMUSG00000033987	NonProperStrand	20	chr3	129932989	129933079	protein_coding	Col25a1	intron	ENSMUSG00000058897	NonProperStrand	8	1	-18.9291
chr11	101054261	101054310	protein_coding	Ezh1	exon	ENSMUSG00000006920	ProperStrand	9	chr16	23111772	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-9.0498
chr2	10282934	10282977	lincRNA	Gm13261	intron	ENSMUSG00000086748	ProperStrand	2	chr18	35714216	35714257	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-inf
chr2	9384594	9384684	LTR	MTD	MaLR	chr2MTD9384531	NonProperStrand	1	chr2	9384457	9384547	SINE	B4	B4	chr2B49384340	ProperStrand	1	1	-inf
chr8	38049667	38049683	LTR	MLT1A0	MaLR	chr8MLT1A038049422	NonProperStrand	91	chr13	19684241	19684257	protein_coding	Epdr1	utr3	ENSMUSG00000002808	ProperStrand	46	2	-19.9211
chr9	45127112	45127202	antisense	1700003G13Rik	.	ENSMUSG00000085831	NonProperStrand	1	chr9	45127410	45127500	protein_coding	Tmprss13	intron	ENSMUSG00000037129	ProperStrand	3	1	-inf
chr2	129004103	129004121	antisense	AI847159	.	ENSMUSG00000084826	NonProperStrand	63	chr11	62416575	62416614	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	1	-8.8738
chr2	131372110	131372131	protein_coding	Adra1d	exon	ENSMUSG00000027335	NonProperStrand	3	chr16	23110916	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr2	90235287	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	130103432	130103501	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	2	-0.9546
chr2	158457348	158457364	protein_coding	Actr5	exon	ENSMUSG00000037761	NonProperStrand	94	chr10	80012209	80012260	protein_coding	Rexo1	exon	ENSMUSG00000047417	ProperStrand	46	1	-12.9479
chr12	86398185	86398231	protein_coding	Ylpm1	exon	ENSMUSG00000021244	ProperStrand	100	chr5	130300474	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.6803
chr7	35996773	35996791	protein_coding	Lrp3	intron	ENSMUSG00000001802	ProperStrand	17	chr13	111185477	111185577	protein_coding	Plk2	exon	ENSMUSG00000021701	ProperStrand	14	1	-22.5166
chr5	50389557	50390374	protein_coding	Gpr125	exon	ENSMUSG00000029090	ProperStrand	29	chr16	23111449	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.3903
chr12	112779206	112779296	protein_coding	Eif5	intron	ENSMUSG00000021282	ProperStrand	125	chr7	116664822	116664902	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	10	-18.8583
chr2	73234220	73234238	lincRNA	D230022J07Rik	intron	ENSMUSG00000087176	ProperStrand	5	chr17	45704934	45705034	protein_coding	Hsp90ab1	utr3	ENSMUSG00000023944	NonProperStrand	4	1	-20.9004
chr14	66205132	66205222	protein_coding	Elp3	exon	ENSMUSG00000022031	ProperStrand	71	chr15	34370584	34370664	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-3.2413
chr11	77317914	77317931	protein_coding	Git1	exon	ENSMUSG00000011877	ProperStrand	95	chr13	30909523	30909623	protein_coding	Exoc2	intron	ENSMUSG00000021357	ProperStrand	24	1	-14.2471
chr17	34089432	34089465	protein_coding	Rps18	exon	ENSMUSG00000008668	ProperStrand	111	chr13	52742450	52742466	protein_coding	Syk	utr3	ENSMUSG00000021457	NonProperStrand	125	1	-10.6039
chr10	41905812	41905904	protein_coding	Foxo3	utr3	ENSMUSG00000048756	ProperStrand	59	chr2	145077957	145209255	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	3	-17.3783
chr4	43003621	43003637	protein_coding	Vcp	exon	ENSMUSG00000028452	ProperStrand	108	chr17	36094437	36094492	protein_coding	Abcf1	exon	ENSMUSG00000038762	ProperStrand	206	1	-9.6596
chr6	56051505	56051521	protein_coding	Pde1c	utr3	ENSMUSG00000004347	ProperStrand	31	chr10	127009601	127009855	protein_coding	Lrp1	exon	ENSMUSG00000040249	ProperStrand	151	1	-12.7955
chr14	51427116	51427209	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr3	159502831	159502850	protein_coding	Wls	utr5	ENSMUSG00000028173	NonProperStrand	35	1	-8.2885
chr11	68717875	68718029	protein_coding	Rpl26	utr3	ENSMUSG00000060938	ProperStrand	130	chr18	35716787	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-2.0286
chr4	131908236	131908342	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	chr2	37255577	37255660	snoRNA	ENSMUSG00000077756_Snord90	.	ENSMUSG00000077756	ProperStrand	167	3	-1.3207
chr11	3868304	3869449	protein_coding	Pes1	exon	ENSMUSG00000020430	ProperStrand	49	chr9	15119358	15119427	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	3	-12.8349
chr5	136451719	136451736	SINE	B3A	B2	chr5B3A136451702	NonProperStrand	23	chr7	118219695	118219740	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-6.0392
chr15	29157258	29157274	LINE	Lx8	L1	chr15Lx829156540	ProperStrand	19	chr15	79913324	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-5.8137
chr9	44447650	44447750	protein_coding	Ddx6	utr3	ENSMUSG00000032097	ProperStrand	59	chrX	84483718	84483755	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-8.2826
chr18	61219834	61220865	protein_coding	Pdgfrb	exon	ENSMUSG00000024620	NonProperStrand	37	chr11	62418014	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-6.5114
chr19	46440904	46441004	protein_coding	Tmem180	exon	ENSMUSG00000025227	ProperStrand	20	chr1	162968492	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-8.2798
chr7	52309977	52309993	protein_coding	Prrg2	exon	ENSMUSG00000007837	NonProperStrand	281	chr1	24621340	24621401	protein_coding	Gm10925	utr3	ENSMUSG00000090378	ProperStrand	320	1	-6.8817
chrX	100517086	100517102	protein_coding	Cdx4	exon	ENSMUSG00000031326	NonProperStrand	30	chr4	116828379	116828428	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-9.7785
chr16	37830843	37830861	protein_coding	Fstl1	intron	ENSMUSG00000022816	ProperStrand	179	chr9	15119287	15119353	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-3.0607
chr4	116312588	116313648	protein_coding	Akr1a1	exon	ENSMUSG00000028692	ProperStrand	35	chr18	35714187	35714277	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.4569
chr15	76080234	76080324	protein_coding	Grina	utr3	ENSMUSG00000022564	ProperStrand	18	chr7	118219581	118219661	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-6.5317
chr13	20374830	20374847	protein_coding	Elmo1	exon	ENSMUSG00000041112	NonProperStrand	34	chr4	43441950	43441967	protein_coding	Fam166b	utr5	ENSMUSG00000042788	NonProperStrand	4	1	-18.8030
chr2	167836657	167836685	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	chr14	45949538	45949554	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	1	-8.7441
chrX	146988789	146988837	protein_coding	Apex2	intron	ENSMUSG00000025269	ProperStrand	8	chr9	50669804	50669832	protein_coding	Ppp2r1b	exon	ENSMUSG00000032058	ProperStrand	22	1	-18.6665
chr3	56632784	56632874	LINE	Lx7	L1	chr3Lx756632810	NonProperStrand	1	chr19	21673307	21693628	protein_coding	1110059E24Rik	exon	ENSMUSG00000035171	NonProperStrand	1	1	-inf
chr11	95135837	95135888	protein_coding	Myst2	utr3	ENSMUSG00000038909	ProperStrand	56	chr4	131866176	131866276	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-3.7936
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr4	134926614	134927796	protein_coding	A330049M08Rik	exon	ENSMUSG00000043924	ProperStrand	130	1	-7.1746
chr4	116826700	116826766	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	chr5	108334225	108334315	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	5	-1.9214
chr8	125626983	125627005	snoRNA	ENSMUSG00000064450_Snord68	.	ENSMUSG00000064450	ProperStrand	181	chr6	115757992	115758121	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-3.3785
chr5	65782034	65782059	protein_coding	Rpl9	exon	ENSMUSG00000047215	ProperStrand	113	chr19	43425102	43425118	protein_coding	Hpse2	intron	ENSMUSG00000074852	NonProperStrand	48	1	-12.4925
chr14	33153227	33153832	protein_coding	Ogdhl	exon	ENSMUSG00000021913	ProperStrand	182	chr7	129072807	129079201	protein_coding	Cog7	exon	ENSMUSG00000034951	ProperStrand	29	1	-12.5576
chr9	15119722	15119969	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	chr11	98572374	98572392	snoRNA	ENSMUSG00000088169_SNORD124	.	ENSMUSG00000088169	ProperStrand	62	2	-4.5250
chr9	70960075	70960092	protein_coding	Aqp9	exon	ENSMUSG00000032204	NonProperStrand	118	chr11	58809803	58810353	protein_coding	Obscn	exon	ENSMUSG00000061462	ProperStrand	81	1	-11.3520
chr15	79913288	79913345	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr15	79658454	79658536	protein_coding	Cbx6	exon	ENSMUSG00000089715	ProperStrand	16	1	-6.1593
chr2	38574902	38574922	lincRNA	4933433P16Rik	intron	ENSMUSG00000087164	ProperStrand	1	chr19	8963024	8963124	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-inf
chr8	125100340	125100420	protein_coding	Aprt	intron	ENSMUSG00000006589	ProperStrand	20	chr4	56910503	56910593	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-8.3081
chr6	71812467	71813227	protein_coding	Immt	exon	ENSMUSG00000052337	ProperStrand	48	chr16	23111435	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	7	-13.2170
chr2	115091601	115091691	SINE	B3A	B2	chr2B3A115091533	ProperStrand	1	chr2	115841168	115841248	protein_coding	Meis2	intron	ENSMUSG00000027210	NonProperStrand	8	1	-inf
chr2	90235299	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	72266431	72266448	protein_coding	Spns2	utr3	ENSMUSG00000040447	NonProperStrand	7	1	-8.8025
chr17	37200069	37200137	protein_coding-noncoding	Gabbr1	utr5	ENSMUSG00000024462	ProperStrand	2	chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	2	-inf
chr11	3134549	3134627	protein_coding	Eif4enif1	exon	ENSMUSG00000020454	ProperStrand	575	chr1	72272875	72272965	snRNA	ENSMUSG00000075752_U2	.	ENSMUSG00000075752	ProperStrand	535	1	-4.4922
chr13	23830781	23831160	protein_coding	Hist1h1c	exon	ENSMUSG00000036181	ProperStrand	99	chr4	131908236	131908355	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-1.5936
chr9	64981511	64981528	protein_coding	Igdcc4	exon	ENSMUSG00000032816	NonProperStrand	36	chr19	8799021	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	2	-11.0504
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr19	37074628	37074852	protein_coding	Btaf1	exon	ENSMUSG00000040565	ProperStrand	23	3	-18.1289
chr9	110845663	110845735	protein_coding	Tdgf1	exon	ENSMUSG00000032494	ProperStrand	218	chr16	56035886	56035976	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	1	-6.3813
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	138220701	138220717	protein_coding	Ppp1r35	exon	ENSMUSG00000029725	ProperStrand	7	1	-8.8025
chr14	76247792	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	chr11	74718953	74718979	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	1	-0.7422
chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	chr8	106976637	106976653	protein_coding	Ccdc79	exon	ENSMUSG00000052616	NonProperStrand	57	1	-11.7883
chr9	120039581	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	chr8	113366292	113366324	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	2	-0.8719
chr14	55057856	55057872	protein_coding	Mmp14	exon	ENSMUSG00000000957	ProperStrand	61	chr1	162965531	162965588	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.2462
chr4	29242162	29242252	Other	RMER1A	Other	chr4RMER1A29241498	ProperStrand	1	chr4	29242302	29242382	Other	RMER1A	Other	chr4RMER1A29242165	ProperStrand	1	1	-inf
chr11	5118937	5118956	protein_coding	Kremen1	intron	ENSMUSG00000020393	ProperStrand	33	chr16	23111748	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.9163
chr3	51363900	51364000	lincRNA	5031434O11Rik	intron	ENSMUSG00000085462	ProperStrand	7	chr5	74489618	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	7	-inf
chr1	58116010	58116028	protein_coding	Aox1	exon	ENSMUSG00000063558	ProperStrand	20	chr7	116663646	116663714	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.5385
chr3	100750663	100750731	protein_coding-noncoding	Ttf2	utr3	ENSMUSG00000033222	ProperStrand	24	chr19	8800377	8800467	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-5.2834
chr9	48863798	48863888	protein_coding	Zw10	exon	ENSMUSG00000032264	ProperStrand	20	chr18	65743249	65743266	protein_coding	Zfp532	intron	ENSMUSG00000042439	NonProperStrand	8	2	-19.5565
chr19	8798484	8798550	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	chr11	106362671	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	3	-1.8235
chr10	60202555	60202573	protein_coding	Slc29a3	intron	ENSMUSG00000020100	ProperStrand	23	chr8	109428220	109428324	protein_coding	Cirh1a	exon	ENSMUSG00000041438	ProperStrand	40	8	-19.7855
chr12	114359283	114361329	protein_coding	Mta1	exon	ENSMUSG00000021144	ProperStrand	74	chr1	162966853	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-5.8461
chr14	20598852	20598942	protein_coding	Nid2	exon	ENSMUSG00000021806	ProperStrand	372	chr16	23111374	23111454	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	7	-1.1057
chr14	67537912	67537960	protein_coding	Pnma2	utr3	ENSMUSG00000046204	ProperStrand	5	chr18	35716773	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-11.6367
chr7	108440949	108440967	protein_coding	Atg16l2	intron	ENSMUSG00000047767	ProperStrand	121	chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	1	-7.1948
chr5	107978414	107980002	protein_coding	Glmn	exon	ENSMUSG00000029276	ProperStrand	8	chr7	134671398	134671478	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-12.0015
chr2	168777049	168777139	protein_coding	Zfp64	exon	ENSMUSG00000027551	ProperStrand	11	chr5	130300419	130300553	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	9	-inf
chr1	193731483	193732737	protein_coding	Slc30a1	exon	ENSMUSG00000037434	ProperStrand	42	chr14	33005158	33005199	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-4.6734
chr1	23163281	23163361	SINE	B3	B2	chr1B323163299	ProperStrand	1	chr1	23163409	23163499	SINE	PB1D9	Alu	chr1PB1D923163377	ProperStrand	1	1	-inf
chr12	12944235	12944251	protein_coding	Mycn	exon	ENSMUSG00000037169	NonProperStrand	109	chr11	117152193	117152275	protein_coding	Sept9	exon	ENSMUSG00000059248	ProperStrand	60	1	-12.1143
chr3	88124428	88124472	protein_coding	Cct3	exon	ENSMUSG00000001416	ProperStrand	82	chr4	134926614	134927796	protein_coding	A330049M08Rik	exon	ENSMUSG00000043924	ProperStrand	130	2	-17.4473
chr6	85417744	85418073	protein_coding	Cct7	exon	ENSMUSG00000030007	ProperStrand	173	chr4	130154584	130154601	protein_coding	Nkain1	intron	ENSMUSG00000078532	NonProperStrand	10	2	-inf
chr11	116535921	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr6	41604882	41604899	protein_coding	Trpv5	exon	ENSMUSG00000036899	ProperStrand	4	1	-11.5504
chr17	23955819	23955838	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	chr2	26493365	26493472	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-3.8142
chr14	76906306	76906339	protein_coding	Tsc22d1	exon	ENSMUSG00000022010	ProperStrand	86	chr18	35716684	35716786	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.6021
chr5	74489543	74489605	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr5	37667536	37667552	protein_coding	Crmp1	exon	ENSMUSG00000029121	ProperStrand	85	1	-4.9446
chr7	116888857	116893541	protein_coding	Tmem9b	exon	ENSMUSG00000031021	ProperStrand	1	chr5	130300458	130300538	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-inf
chrX	149828130	149828146	protein_coding	Klf8	utr3	ENSMUSG00000041649	NonProperStrand	107	chr11	97643038	97643078	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.5458
chr2	80297373	80297389	LINE	L1MB8	L1	chr2L1MB880297262	ProperStrand	53	chr17	27559700	27559717	protein_coding	Grm4	utr3	ENSMUSG00000063239	ProperStrand	147	1	-11.7649
chr2	90235294	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	88384672	88384725	protein_coding	Msh6	exon	ENSMUSG00000005370	ProperStrand	150	1	-2.7776
chr11	82711333	82711350	protein_coding	Fndc8	exon	ENSMUSG00000018844	NonProperStrand	5	chr10	23505150	23505254	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-5.7809
chr15	81700897	81702277	protein_coding	Phf5a	exon	ENSMUSG00000061360	ProperStrand	3	chr4	131865381	131865461	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-10.2531
chr5	74489202	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr3	90017539	90017569	protein_coding	Rps27	utr5	ENSMUSG00000090733	ProperStrand	40	1	-6.4218
chr4	33597764	33597780	LINE	L2	L2	chr4L233597685	NonProperStrand	4	chr6	87871565	87871608	protein_coding	8430410A17Rik	exon	ENSMUSG00000030060	ProperStrand	22	1	-20.6761
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chrX	13164082	13177489	protein_coding	Cask	exon	ENSMUSG00000031012	NonProperStrand	26	1	-10.4037
chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr10	62228322	62228364	snoRNA	ENSMUSG00000080469_Snord98	.	ENSMUSG00000080469	ProperStrand	124	1	-5.0343
chr10	82484173	82484263	protein_coding	Chst11	intron	ENSMUSG00000034612	ProperStrand	170	chr2	26494716	26494796	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.4016
chr7	28421987	28422022	protein_coding	Akt2	exon	ENSMUSG00000004056	ProperStrand	100	chr17	13112498	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	4	-11.9671
chr4	107726823	107726839	protein_coding	Scp2	intron	ENSMUSG00000028603	NonProperStrand	2	chr15	79912137	79912843	protein_coding	Rpl3	exon	ENSMUSG00000060036	ProperStrand	8342	1	-10.9071
chr3	79223176	79223193	protein_coding	Gm17359	intron	ENSMUSG00000091685	NonProperStrand	50	chr7	29136597	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-4.6941
chr1	183847343	183848389	protein_coding	Enah	exon	ENSMUSG00000022995	ProperStrand	196	chr11	98878363	98878453	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	4	-12.9251
chr1	88495759	88502493	protein_coding	Cops7b	utr3	ENSMUSG00000026240	ProperStrand	59	chr16	23110475	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-4.3970
chr8	113447105	113447163	snoRNA	ENSMUSG00000065100_SNORA57	.	ENSMUSG00000065100	ProperStrand	81	chr10	23505148	23505234	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-0.8528
chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	chr7	38433950	38433968	protein_coding	Zfp536	intron	ENSMUSG00000043456	ProperStrand	57	1	-10.7219
chr4	46482820	46484310	protein_coding	Anp32b	exon	ENSMUSG00000028333	ProperStrand	229	chr5	108333646	108333666	snoRNA	ENSMUSG00000064453_Snord21	.	ENSMUSG00000064453	ProperStrand	201	2	-13.0730
chr4	64963757	64963774	protein_coding	Pappa	intron	ENSMUSG00000028370	NonProperStrand	32	chr17	24857718	24857780	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.4074
chr18	48207057	48207517	protein_coding	Gm5506	exon	ENSMUSG00000059040	ProperStrand	105	chr4	149619368	149622212	protein_coding	Eno1	exon	ENSMUSG00000063524	ProperStrand	432	25	-19.8432
chr4	119210963	119210989	protein_coding	AA415398	intron	ENSMUSG00000087385	ProperStrand	1	chr7	29136535	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-inf
chr17	71854178	71856605	protein_coding	Ndc80	exon	ENSMUSG00000024056	ProperStrand	33	chr16	23110907	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.8807
chr6	35489760	35489803	protein_coding	Mtpn	utr5	ENSMUSG00000029840	ProperStrand	18	chr1	74415168	74415184	protein_coding	Gm216	exon	ENSMUSG00000073650	ProperStrand	33	1	-16.8216
chr5	132014866	132014882	protein_coding	Auts2	intron	ENSMUSG00000029673	ProperStrand	71	chr12	82881676	82881692	protein_coding	Map3k9	exon	ENSMUSG00000042724	ProperStrand	92	1	-12.1166
chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	chr5	90673063	90673163	protein_coding	Ankrd17	exon	ENSMUSG00000055204	ProperStrand	77	1	-9.9750
chr8	85906778	85906868	LTR	RLTR9A	ERVK	chr8RLTR9A85906726	NonProperStrand	1	chr8	85907038	85907128	SINE	B4	B4	chr8B485907053	NonProperStrand	1	1	-inf
chr7	134849300	134850725	protein_coding	Bcl7c	exon	ENSMUSG00000030814	ProperStrand	15	chr9	120037905	120037958	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-7.4601
chr12	111891542	111891632	protein_coding	Dync1h1	intron	ENSMUSG00000018707	ProperStrand	648	chr19	44188472	44188552	snoRNA	ENSMUSG00000077391_SNORA12	.	ENSMUSG00000077391	ProperStrand	506	10	-inf
chr4	149459310	149459327	LINE	L1ME2z	L1	chr4L1ME2z149458870	ProperStrand	12	chr4	131908302	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.2270
chr2	144116364	144116385	LTR	MLT2B2	ERVL	chr2MLT2B2144116217	NonProperStrand	17	chr15	5068442	5068480	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-8.5996
chr9	54754643	54756551	protein_coding	Ireb2	exon	ENSMUSG00000032293	ProperStrand	45	chr7	116664820	116664921	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	4	-10.5783
chr11	51456669	51456695	protein_coding	N4bp3	utr3	ENSMUSG00000001053	ProperStrand	45	chr10	23505152	23505265	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-4.7670
chr10	40069651	40069706	protein_coding	Cdk19	intron	ENSMUSG00000038481	ProperStrand	34	chr4	131908688	131908728	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-5.7542
chr3	152090274	152090319	protein_coding	Zzz3	exon	ENSMUSG00000039068	ProperStrand	26	chr16	23111733	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-5.7618
chr17	25861512	25863661	protein_coding	Chtf18	exon	ENSMUSG00000019214	ProperStrand	38	chr16	23110829	23111005	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	10	-15.2365
chr15	42169435	42169523	LINE	L1_Mur3	L1	chr15L1_Mur342169177	ProperStrand	1	chr15	42169645	42169725	LTR	ORR1B1	MaLR	chr15ORR1B142169645	NonProperStrand	1	1	-inf
chr7	13615644	13615823	protein_coding	Trim28	exon	ENSMUSG00000005566	ProperStrand	296	chr7	111381624	111381683	protein_coding	Trim6	utr3	ENSMUSG00000072244	ProperStrand	40	1	-10.9323
chr10	86159560	86161143	protein_coding	Hsp90b1	exon	ENSMUSG00000020048	ProperStrand	396	chr7	5033598	5033619	protein_coding	Epn1	intron	ENSMUSG00000035203	ProperStrand	15	1	-12.3515
chr19	8799041	8799078	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	chr1	172975142	172975189	tRNA	tRNA699-GlyGCC	.	1621524	ProperStrand	660	1	-1.5279
chr9	14397578	14397594	protein_coding	Amotl1	exon	ENSMUSG00000013076	ProperStrand	72	chr4	21797544	21798592	protein_coding	Sfrs18	exon	ENSMUSG00000028248	NonProperStrand	26	1	-14.6380
chr4	57375690	57375706	lincRNA	1700042G15Rik	intron	ENSMUSG00000087044	NonProperStrand	5	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-8.2678
chrX	151772839	151772856	protein_coding	Prdx4	exon	ENSMUSG00000025289	ProperStrand	29	chr16	23110828	23110890	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0921
chr13	8766311	8766420	protein_coding	Adarb2	utr3	ENSMUSG00000052551	NonProperStrand	61	chr1	162966007	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-3.5727
chr4	95262136	95262152	protein_coding	Fggy	intron	ENSMUSG00000028573	ProperStrand	44	chr10	39978408	39978482	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-6.0690
chr4	44072955	44072972	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr4	131866608	131866672	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	1	-2.9189
chr17	56575518	56577248	protein_coding	Ptprs	exon	ENSMUSG00000013236	ProperStrand	152	chr18	35716865	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-0.8407
chr7	30231479	30231581	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	chr19	8799831	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-1.1235
chr10	80640617	80640811	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr10	30530999	30531020	tRNA	tRNA81-GluCTC	.	1497837	ProperStrand	154	1	-4.2749
chr12	58691976	58691992	antisense	4921518K17Rik	.	ENSMUSG00000085851	ProperStrand	75	chr4	116826699	116826766	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-6.3399
chr19	10703648	10703738	protein_coding	Ddb1	utr3	ENSMUSG00000024740	ProperStrand	304	chr1	191587451	191587482	protein_coding	Ptpn14	intron	ENSMUSG00000026604	NonProperStrand	5	1	-15.2160
chr1	96279181	96279271	LINE	Lx9	L1	chr1Lx996279140	NonProperStrand	1	chr1	96279300	96279390	LTR	RLTR24	ERV1	chr1RLTR2496279265	ProperStrand	1	1	-inf
chr3	9520604	9520621	protein_coding	Zfp704	intron	ENSMUSG00000040209	NonProperStrand	8	chr1	93263066	93263082	protein_coding	Fam132b	exon	ENSMUSG00000047443	NonProperStrand	98	1	-16.4252
chr2	42892354	42892372	LINE	Lx4B	L1	chr2Lx4B42892324	ProperStrand	1	chr12	112501850	112501877	protein_coding	Traf3	utr3	ENSMUSG00000021277	ProperStrand	39	1	-inf
chr18	42805538	42805554	protein_coding	Ppp2r2b	exon	ENSMUSG00000024500	NonProperStrand	95	chr18	35716763	35716810	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.4556
chr1	88252838	88252879	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	chr14	52829519	52829569	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-1.9151
chr2	31634064	31634154	protein_coding	Abl1	intron	ENSMUSG00000026842	ProperStrand	131	chr5	124826196	124826239	protein_coding	Sbno1	exon	ENSMUSG00000038095	ProperStrand	134	1	-10.1329
chr15	82980136	82980226	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr12	88778645	88778725	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-1.0421
chr4	128899900	128899916	protein_coding	C77080	exon	ENSMUSG00000050390	NonProperStrand	28	chr9	120038466	120038552	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.4612
chr12	77639895	77639975	protein_coding	Plekhg3	intron	ENSMUSG00000052609	ProperStrand	19	chr19	8800380	8800470	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-9.4356
chr8	109995083	109995176	protein_coding	Wwp2	intron	ENSMUSG00000031930	ProperStrand	18	chr1	181027187	181027205	protein_coding	Smyd3	intron	ENSMUSG00000055067	ProperStrand	231	2	-inf
chr5	120889875	120889892	protein_coding	Lhx5	intron	ENSMUSG00000029595	NonProperStrand	106	chr11	62416599	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-4.0772
chr17	24817112	24817212	protein_coding	Zfp598	exon	ENSMUSG00000041130	ProperStrand	26	chr1	162967516	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-5.0673
chr17	53818579	53818669	protein_coding	Sgol1	exon	ENSMUSG00000023940	ProperStrand	17	chr10	23505157	23505237	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.3129
chr15	76922663	76922683	protein_coding	Rbfox2	intron	ENSMUSG00000033565	ProperStrand	55	chr1	162965980	162966034	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-3.7649
chr4	43505804	43505894	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr6	39349057	39349121	protein_coding	Mkrn1	utr3	ENSMUSG00000029922	ProperStrand	177	1	-1.3159
chr18	73693163	73693189	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr2	91436228	91436319	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	3	-2.3651
chr17	30772308	30772324	protein_coding	Dnahc8	utr5	ENSMUSG00000033826	ProperStrand	246	chr14	31827504	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-4.2019
chr7	107069783	107069821	protein_coding	Rnf169	utr3	ENSMUSG00000058761	ProperStrand	31	chr1	88247743	88247798	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-6.3965
chr11	115451723	115451739	protein_coding	Gga3	exon	ENSMUSG00000020740	NonProperStrand	50	chr3	55987229	55987247	protein_coding	Nbea	utr5	ENSMUSG00000027799	NonProperStrand	115	1	-12.3747
chr7	57470427	57470445	protein_coding	Nell1	intron	ENSMUSG00000055409	ProperStrand	8	chr1	162967489	162967553	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-7.4644
chr1	71625444	71625518	protein_coding	Atic	utr3	ENSMUSG00000026192	ProperStrand	30	chr1	162967515	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	4	-15.1764
chr1	63223702	63223751	protein_coding	Eef1b2	utr5	ENSMUSG00000025967	ProperStrand	106	chr4	3762144	3762431	protein_coding	Rps20	exon	ENSMUSG00000028234	ProperStrand	71	1	-11.8319
chr5	138125595	138125629	protein_coding	Agfg2	exon	ENSMUSG00000029722	ProperStrand	14	chr16	32099912	32099929	protein_coding	1500031L02Rik	utr5	ENSMUSG00000035790	NonProperStrand	18	1	-18.7464
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	3	-6.5169
chr6	87578827	87578869	protein_coding	Aplf	utr3	ENSMUSG00000030051	ProperStrand	7	chr16	23110531	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-15.7111
chr3	41414110	41414186	protein_coding	Phf17	intron	ENSMUSG00000025764	ProperStrand	101	chr9	99245872	99245893	protein_coding	Esyt3	intron	ENSMUSG00000037681	ProperStrand	7	2	-inf
chr4	155547861	155547931	protein_coding	Agrn	intron	ENSMUSG00000041936	ProperStrand	175	chr14	56493212	56493312	protein_coding	Nynrin	utr3	ENSMUSG00000075592	ProperStrand	76	1	-10.6903
chr2	158182156	158182278	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	chr15	71624775	71624799	snoRNA	ENSMUSG00000088895_SNORA81	.	ENSMUSG00000088895	ProperStrand	348	1	-1.8483
chr9	42063271	42063310	protein_coding	Sc5d	utr3	ENSMUSG00000032018	ProperStrand	19	chr2	26493365	26493464	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	4	-18.3481
chr4	43505656	43505720	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr2	174171777	174171804	protein_coding	Gnas	utr3	ENSMUSG00000027523	ProperStrand	41	1	-3.7690
chr10	120808247	120811417	protein_coding	Gns	exon	ENSMUSG00000034707	NonProperStrand	11	chr1	88247816	88247876	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-8.5056
chr9	65298432	65298532	protein_coding	Mtfmt	intron	ENSMUSG00000059183	ProperStrand	1	chr4	131908236	131908276	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-inf
chrX	132673816	132673833	protein_coding	Bex4	intron	ENSMUSG00000047844	NonProperStrand	70	chr11	97642952	97643007	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.2124
chr10	84609373	84609390	protein_coding	Cry1	exon	ENSMUSG00000020038	ProperStrand	33	chr17	17093657	17093744	protein_coding	BC002059	intron	ENSMUSG00000060149	ProperStrand	10	1	-17.7574
chr17	35280468	35280568	protein_coding	Bag6	exon	ENSMUSG00000024392	NonProperStrand	4	chr4	131865905	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	NonProperStrand	39	1	-18.3828
chr14	20600402	20600497	protein_coding	Nid2	exon	ENSMUSG00000021806	ProperStrand	372	chr1	162968257	162968288	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	7	-inf
chr11	62416575	62416605	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr11	97642952	97643088	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	5	-1.3843
chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	chr15	98350175	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	8	-0.8499
chr12	55797769	55797849	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	chrX	71517862	71517952	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-1.4576
chr8	77650231	77651179	protein_coding	Mcm5	exon	ENSMUSG00000005410	ProperStrand	199	chr16	23111750	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-1.6481
chr19	44369632	44372531	protein_coding	Scd2	exon	ENSMUSG00000025203	ProperStrand	219	chr19	8963032	8963048	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-7.5695
chr8	108734812	108734828	protein_coding	Slc7a6os	utr5	ENSMUSG00000033106	NonProperStrand	29	chr18	73693170	73693188	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-6.9646
chr8	12757419	12757438	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr1	70698970	70698987	protein_coding	Spag16	intron	ENSMUSG00000053153	ProperStrand	16	1	-11.2746
chr19	3261200	3261221	protein_coding	Ighmbp2	utr3	ENSMUSG00000024831	NonProperStrand	4	chr4	131865868	131865968	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-17.5900
chr1	107743297	107743315	protein_coding	Tnfrsf11a	utr3	ENSMUSG00000026321	NonProperStrand	100	chr15	82980099	82980150	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-6.1289
chr7	144666677	144666696	LTR	RLTR1B-int	ERV1	chr7RLTR1B-int144665126	ProperStrand	3	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-9.4650
chr1	128868196	128868286	LTR	ORR1A4	MaLR	chr1ORR1A4128868087	NonProperStrand	1	chr7	116859190	116859280	protein_coding	BC051019	intron	ENSMUSG00000031022	NonProperStrand	1	1	-inf
chr11	82718314	82718404	protein_coding	Nle1	exon	ENSMUSG00000020692	ProperStrand	13	chr8	12909191	12909208	protein_coding	Mcf2l	intron	ENSMUSG00000031442	ProperStrand	14	1	-21.2162
chr8	87578646	87578933	protein_coding	Tnpo2	exon	ENSMUSG00000031691	ProperStrand	92	chr7	117190017	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.5738
chr7	147311579	147311669	protein_coding	Paox	utr5	ENSMUSG00000025464	ProperStrand	2	chr7	133636295	133636341	protein_coding	Atxn2l	exon	ENSMUSG00000032637	ProperStrand	219	1	-18.1755
chr2	90235324	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	32195966	32195984	protein_coding	Dnm1	exon	ENSMUSG00000026825	NonProperStrand	8	1	-8.5166
chr11	102904499	102907718	protein_coding	Nmt1	exon	ENSMUSG00000020936	ProperStrand	43	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.9440
chr14	33153227	33153832	protein_coding	Ogdhl	exon	ENSMUSG00000021913	ProperStrand	182	chr8	108141985	108142051	protein_coding	Fam65a	exon	ENSMUSG00000038604	ProperStrand	19	1	-13.4210
chr2	180716506	180716596	protein_coding	Arfgap1	utr3	ENSMUSG00000027575	ProperStrand	18	chr11	6520345	6520425	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	1	-10.1515
chr10	127021391	127021409	protein_coding	Lrp1	exon	ENSMUSG00000040249	ProperStrand	151	chr5	34076429	34076549	protein_coding	Fgfr3	exon	ENSMUSG00000054252	ProperStrand	13	1	-14.5783
chr4	129662257	129662276	protein_coding	Bai2	utr5	ENSMUSG00000028782	ProperStrand	119	chr7	36166460	36166550	protein_coding	Rhpn2	exon	ENSMUSG00000030494	ProperStrand	5	1	-17.0011
chr4	141673026	141673042	protein_coding	Kazn	exon	ENSMUSG00000040606	ProperStrand	123	chr19	8963028	8963183	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.1846
chr1	162965977	162965999	non_coding	Gas5	.	ENSMUSG00000053332	ProperStrand	144	chr7	52162323	52162340	protein_coding	Ap2a1	exon	ENSMUSG00000060279	ProperStrand	193	1	-9.2145
chr4	133163591	133163631	protein_coding	Zdhhc18	utr3	ENSMUSG00000037553	ProperStrand	51	chr11	69481385	69481475	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.4975
mmu-miR-295-5p	4	22	miRNA	mmu-miR-295-5p	.	mmu-miR-295-5p	ProperStrand	3	chr6	115757992	115758077	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-11.7922
chr9	39358287	39358304	protein_coding	Olfr958	exon	ENSMUSG00000050853	NonProperStrand	266	chr7	52382014	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-3.8349
chr10	7383389	7383405	protein_coding	Pcmt1	utr5	ENSMUSG00000019795	ProperStrand	55	chr1	166371648	166371695	protein_coding	Atp1b1	exon	ENSMUSG00000026576	ProperStrand	67	1	-13.2656
chr9	79641002	79641044	protein_coding	Tmem30a	utr5	ENSMUSG00000032328	ProperStrand	90	chr10	90644839	90644903	tRNA	tRNA856-AspGTC	.	986898	ProperStrand	65	1	-12.3378
chr14	72301755	72301771	SINE	B4	B4	chr14B472301692	NonProperStrand	99	chr8	113250120	113250313	protein_coding	Mtss1l	utr5	ENSMUSG00000033763	ProperStrand	12	1	-15.6113
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr11	62418015	62418089	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	4	-4.1401
chr2	128182129	128182149	lincRNA	Gm14005	intron	ENSMUSG00000074813	NonProperStrand	3	chr4	131908357	131908415	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-7.2242
chr17	56924163	56924722	protein_coding	Rfx2	exon	ENSMUSG00000024206	ProperStrand	32	chr12	88778627	88778727	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-7.7524
chr5	120121292	120121392	protein_coding	Tbx3	utr5	ENSMUSG00000018604	ProperStrand	87	chr2	26768373	26768437	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-4.8797
chr7	67123693	67123759	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	chr3	123210854	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	7	-2.9246
chr2	168426892	168426910	protein_coding	Nfatc2	intron	ENSMUSG00000027544	NonProperStrand	49	chr11	62416575	62416620	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-5.5616
chr2	35584078	35584128	protein_coding	Dab2ip	utr3	ENSMUSG00000026883	ProperStrand	93	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-9.5486
chr3	130431978	130432032	protein_coding	Rpl34	exon	ENSMUSG00000062006	ProperStrand	51	chr9	15119631	15119731	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.9150
chr6	89307568	89307620	protein_coding	Plxna1	exon	ENSMUSG00000030084	ProperStrand	233	chr7	117189946	117189992	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-2.2122
chr17	46301196	46301213	protein_coding	Gtpbp2	exon	ENSMUSG00000023952	ProperStrand	21	chr9	21203586	21203637	protein_coding	Ilf3	exon	ENSMUSG00000032178	ProperStrand	164	1	-13.4258
chr6	127442702	127442792	protein_coding	Parp11	utr3	ENSMUSG00000037997	ProperStrand	5	chr4	131908811	131908891	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.7672
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr16	85795631	85795647	protein_coding	Adamts1	utr3	ENSMUSG00000022893	ProperStrand	102	1	-3.4684
chr11	120207194	120207227	protein_coding	Actg1	utr3	ENSMUSG00000062825	NonProperStrand	3	chr4	131866154	131866254	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	NonProperStrand	19	2	-inf
chr8	125418803	125418819	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	chr11	97489301	97489413	protein_coding	E130012A19Rik	utr3	ENSMUSG00000043439	ProperStrand	83	1	-8.9653
chr7	109148428	109148482	protein_coding	Numa1	utr5	ENSMUSG00000066306	ProperStrand	148	chr1	63225612	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-4.9025
chr8	36529522	36529538	protein_coding	Eri1	utr3	ENSMUSG00000031527	NonProperStrand	97	chr1	90161922	90161948	protein_coding	Hjurp	exon	ENSMUSG00000044783	ProperStrand	110	1	-11.1311
chr11	101599769	101599805	protein_coding	Dhx8	exon	ENSMUSG00000034931	ProperStrand	48	chr18	35716828	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-4.4895
chr4	82114659	82114675	protein_coding	Nfib	intron	ENSMUSG00000008575	ProperStrand	50	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-6.2018
chrX	46063025	46063093	protein_coding	Rbmx2	exon	ENSMUSG00000031107	ProperStrand	7	chr3	123210854	123210907	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-6.1463
chr5	16931350	16931368	Other	RMER1B	Other	chr5RMER1B16930925	ProperStrand	1	chr3	52790330	52793059	protein_coding	Cog6	exon	ENSMUSG00000027742	ProperStrand	5	1	-inf
chr15	99554765	99554781	antisense	Gm16537	.	ENSMUSG00000089671	ProperStrand	1	chr19	8963087	8963187	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-inf
chr9	123760677	123760693	protein_coding	Fyco1	utr5	ENSMUSG00000025241	ProperStrand	31	chr4	116827260	116827343	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	2	-18.1809
chr19	18746826	18746884	protein_coding	2410127L17Rik	intron	ENSMUSG00000024726	ProperStrand	43	chr7	116664793	116664870	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.1373
chr7	26423182	26423214	protein_coding	Bckdha	exon	ENSMUSG00000060376	ProperStrand	14	chr19	8898022	8898038	protein_coding	Hnrnpul2	exon	ENSMUSG00000071659	NonProperStrand	2	1	-inf
chr18	10067530	10067546	protein_coding	Rock1	exon	ENSMUSG00000024290	NonProperStrand	22	chr9	64135979	64136032	protein_coding	Tipin	exon	ENSMUSG00000032397	ProperStrand	32	1	-16.6069
chr7	16534823	16534839	protein_coding	Ehd2	utr3	ENSMUSG00000074364	NonProperStrand	197	chr11	6428075	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-2.4145
chr4	107596083	107596100	protein_coding	Cpt2	utr5	ENSMUSG00000028607	NonProperStrand	106	chr7	106494708	106494774	protein_coding	Serpinh1	exon	ENSMUSG00000070436	ProperStrand	9	1	-16.0618
chr6	7087583	7087601	LINE	Lx4A	L1	chr6Lx4A7087552	NonProperStrand	9	chr2	68221492	68221555	protein_coding	Stk39	intron	ENSMUSG00000027030	ProperStrand	12	1	-20.0762
chr1	55135066	55135156	protein_coding	Hspd1	utr3	ENSMUSG00000025980	ProperStrand	140	chr17	24857720	24857800	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.0333
chr4	32518835	32518852	protein_coding	Bach2	intron	ENSMUSG00000040270	NonProperStrand	16	chr11	69483199	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.9072
chr8	73419681	73419771	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	chr6	125071742	125071822	snoRNA	ENSMUSG00000088208_SCARNA11	.	ENSMUSG00000088208	ProperStrand	113	1	-2.0439
chr4	48598893	48598910	protein_coding	Tmeff1	intron	ENSMUSG00000028347	ProperStrand	47	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-9.4174
chr17	6232006	6232022	protein_coding	Tulp4	exon	ENSMUSG00000034377	NonProperStrand	265	chr18	56692219	56693868	protein_coding	Aldh7a1	exon	ENSMUSG00000053644	ProperStrand	14	1	-13.3024
chr4	64107292	64107382	LINE	Lx9	L1	chr4Lx964107266	ProperStrand	1	chr4	64107022	64107102	LTR	RLTR15	ERVK	chr4RLTR1564106912	NonProperStrand	1	1	-inf
chr2	166889036	166889056	snoRNA	ENSMUSG00000077515_SNORD12	.	ENSMUSG00000077515	ProperStrand	191	chr12	106269300	106269400	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-2.0822
chrX	156315499	156315519	protein_coding	Sh3kbp1	intron	ENSMUSG00000040990	ProperStrand	67	chr9	120038471	120038541	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-4.9437
chr7	54266365	54266383	LTR	RMER2	ERV1	chr7RMER254266273	ProperStrand	1	chr19	8963028	8963166	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-inf
chr10	79879961	79880064	protein_coding	Tcf3	exon	ENSMUSG00000020167	NonProperStrand	24	chr7	36388906	36389233	protein_coding	Ankrd27	exon	ENSMUSG00000034867	ProperStrand	132	1	-13.5861
chr4	140121137	140121153	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	1	-7.8533
chr2	121265622	121265712	protein_coding	Ell3	exon	ENSMUSG00000027246	ProperStrand	14	chr19	8963091	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	7	-inf
chr1	155287328	155287354	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	chr1	89681230	89681330	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-1.5739
chr18	10052133	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr11	119136228	119136244	protein_coding	Gaa	exon	ENSMUSG00000025579	NonProperStrand	201	1	-6.3986
chr9	96976403	96976429	protein_coding	Slc25a36	utr3	ENSMUSG00000032449	ProperStrand	159	chr4	122968671	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-4.3898
chr16	22246003	22246043	protein_coding	Tra2b	utr3	ENSMUSG00000022858	ProperStrand	32	chr18	35716808	35716834	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.2677
chr5	100855944	100855974	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr9	119011770	119011786	protein_coding	Dlec1	exon	ENSMUSG00000038060	NonProperStrand	27	1	-8.2366
chr5	135419653	135419733	SINE	RSINE1	B4	chr5RSINE1135419600	NonProperStrand	1	chr5	135419441	135419531	Unknown	YREP_Mm	Unknown	chr5YREP_Mm135419407	NonProperStrand	1	1	-inf
chr12	103164781	103164857	protein_coding	Atxn3	intron	ENSMUSG00000021189	ProperStrand	20	chr17	24857747	24857838	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	6	-19.4203
chr3	135071783	135071821	protein_coding	Cisd2	exon	ENSMUSG00000028165	ProperStrand	1	chr11	77995191	77995242	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-inf
chr4	140277046	140277116	protein_coding	Rcc2	exon	ENSMUSG00000040945	ProperStrand	228	chr11	69483146	69483236	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-2.1407
chr16	23111761	23111826	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	chr6	38483963	38484004	tRNA	tRNA107-ArgCCT	.	1178852	ProperStrand	63	1	-1.8263
chr6	47753761	47753851	protein_coding	Pdia4	exon	ENSMUSG00000025823	ProperStrand	41	chr1	63225582	63225662	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-7.4266
chr1	34285341	34285441	protein_coding	Dst	exon	ENSMUSG00000026131	ProperStrand	461	chr2	158182214	158182267	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-1.4270
chr5	9130562	9130596	protein_coding	Dmtf1	exon	ENSMUSG00000042508	ProperStrand	6	chr1	162968463	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-10.8078
chr15	5067690	5068570	protein_coding	Rpl37	exon	ENSMUSG00000041841	ProperStrand	69	chr11	97642952	97643086	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.2363
chr14	22661954	22661982	protein_coding-noncoding	Vdac2	utr5	ENSMUSG00000021771	NonProperStrand	1	chr2	73706007	73706089	protein_coding	Atf2	intron	ENSMUSG00000027104	ProperStrand	37	1	-inf
chr18	63238392	63238409	protein_coding	Fam38b	exon	ENSMUSG00000041482	NonProperStrand	50	chr11	97642953	97643093	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.7879
chr7	52479066	52481063	protein_coding	Tead2	exon	ENSMUSG00000030796	ProperStrand	39	chr4	131865448	131865509	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	2	-7.9962
chr3	94690472	94690520	protein_coding	Psmb4	exon	ENSMUSG00000005779	NonProperStrand	2	chr16	36916680	36916697	protein_coding	Golgb1	exon	ENSMUSG00000034243	NonProperStrand	2	1	-inf
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr19	8799581	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	2	-4.1566
chr4	134479844	134479860	protein_coding	D4Wsu53e	exon	ENSMUSG00000037266	NonProperStrand	50	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-3.9322
chr14	119105366	119105418	protein_coding	Abcc4	utr5	ENSMUSG00000032849	ProperStrand	137	chr1	137866392	137866408	protein_coding	Igfn1	exon	ENSMUSG00000051985	ProperStrand	3	2	-inf
chr7	86286656	86287358	protein_coding	Mfge8	exon	ENSMUSG00000030605	ProperStrand	73	chr16	23111397	23111477	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.0012
chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	chr4	148494136	148494153	protein_coding	Dffa	utr3	ENSMUSG00000028974	ProperStrand	55	1	-8.6786
chr13	38437929	38437946	protein_coding	Bmp6	utr5	ENSMUSG00000039004	ProperStrand	21	chr18	73693171	73693187	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-7.6156
chr4	128874505	128877992	protein_coding	Yars	exon	ENSMUSG00000028811	ProperStrand	131	chr3	96654255	96654271	protein_coding	Pdzk1	exon	ENSMUSG00000038298	ProperStrand	101	1	-10.6994
chr2	90235299	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	33828651	33828669	protein_coding	Zfp451	intron	ENSMUSG00000042197	NonProperStrand	393	1	-1.2552
chr7	20165147	20165165	protein_coding	Zfp296	exon	ENSMUSG00000011267	ProperStrand	8	chr2	26494773	26494825	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-7.0621
chr4	131865884	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr14	63287575	63287611	snoRNA	ENSMUSG00000089531_SNORA73	.	ENSMUSG00000089531	ProperStrand	123	1	-0.7947
chr9	121340655	121340672	protein_coding	Trak1	exon	ENSMUSG00000032536	ProperStrand	152	chr9	7940935	7940977	protein_coding	Yap1	intron	ENSMUSG00000053110	ProperStrand	68	1	-11.1957
chr11	101306575	101306639	protein_coding	Rpl27	exon	ENSMUSG00000063316	ProperStrand	96	chr18	35716787	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	5	-7.9431
chr1	88425441	88425475	protein_coding	Ptma	intron	ENSMUSG00000026238	ProperStrand	385	chr9	64023302	64023330	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	1	-4.7886
chr5	42212144	42212234	protein_coding	Bod1l	exon	ENSMUSG00000061755	ProperStrand	43	chr4	131908237	131908317	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.9253
chr18	31769469	31769485	protein_coding	B930094E09Rik	exon	ENSMUSG00000092124	ProperStrand	10	chr11	69483136	69483190	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-5.8555
chr4	108306429	108306529	protein_coding	Cc2d1b	utr3	ENSMUSG00000028582	ProperStrand	13	chr16	20684313	20684387	snoRNA	ENSMUSG00000077239_Snord66	.	ENSMUSG00000077239	ProperStrand	159	1	-14.4801
chr2	25130347	25140689	protein_coding	Anapc2	exon	ENSMUSG00000026965	ProperStrand	15	chr4	131908235	131908295	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-6.4894
chr16	21221833	21221938	protein_coding	Ephb3	exon	ENSMUSG00000005958	NonProperStrand	14	chr10	90581049	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	6	-inf
chr2	98507261	98507341	protein_coding	Gm10800	exon	ENSMUSG00000075014	NonProperStrand	12	chr2	98503007	98503097	protein_coding	Gm10801	intron	ENSMUSG00000075015	ProperStrand	1	1	-inf
chr2	145076803	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	chr5	108334252	108336495	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	5	-3.8484
chr1	164804340	164804358	SINE	RSINE1	B4	chr1RSINE1164804343	NonProperStrand	1	chr7	29136525	29136627	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	NonProperStrand	27	1	-inf
chr10	79394020	79394540	protein_coding	Arid3a	exon	ENSMUSG00000019564	ProperStrand	16	chr1	89831789	89831906	protein_coding	Dgkd	intron	ENSMUSG00000070738	ProperStrand	39	6	-20.5543
chr7	54442521	54442621	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	chr15	5068436	5068480	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-4.4111
chr15	12760094	12760188	protein_coding	Drosha	intron	ENSMUSG00000022191	ProperStrand	163	chr14	46084785	46084817	protein_coding	Fermt2	exon	ENSMUSG00000037712	ProperStrand	23	1	-13.2474
chr7	143781768	143781784	LINE	Lx9	L1	chr7Lx9143781715	ProperStrand	23	chr7	4593006	4593162	protein_coding	Ppp6r1	exon	ENSMUSG00000052296	ProperStrand	20	1	-17.2329
chr7	27237002	27237022	protein_coding	Nlrp4a	intron	ENSMUSG00000040601	ProperStrand	2	chr9	120039538	120039628	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-10.6072
chr8	117250860	117250925	protein_coding	Wwox	intron	ENSMUSG00000004637	ProperStrand	41	chr2	26768058	26768119	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	1	-9.1585
chr1	154691459	154691512	protein_coding	Smg7	exon	ENSMUSG00000042772	ProperStrand	88	chr16	95014304	95014322	protein_coding	Kcnj6	intron	ENSMUSG00000043301	ProperStrand	15	1	-15.3632
chr13	23622964	23623017	protein_coding	Hist1h4h	utr5	ENSMUSG00000060981	ProperStrand	30	chr19	8799859	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	2	-10.2515
chr1	55499567	55499584	protein_coding	Plcl1	intron	ENSMUSG00000038349	ProperStrand	7	chrX	34622906	34623019	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-7.4170
chr13	15651747	15651767	protein_coding	Gli3	intron	ENSMUSG00000021318	ProperStrand	54	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-1.7104
chr15	79843001	79843022	protein_coding	Pdgfb	intron	ENSMUSG00000000489	ProperStrand	11	chr19	27837820	27837836	protein_coding	Rfx3	utr3	ENSMUSG00000040929	ProperStrand	92	1	-15.9278
chr9	105545421	105545521	protein_coding	Pik3r4	utr5	ENSMUSG00000032571	ProperStrand	49	chr1	162967515	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-3.8504
chr7	108440949	108440967	protein_coding	Atg16l2	intron	ENSMUSG00000047767	ProperStrand	121	chr5	108334195	108334282	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	2	-5.9451
chr12	111933284	111933321	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr19	8799854	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-0.7670
chr7	25673327	25673417	protein_coding	Rps19	exon	ENSMUSG00000040952	ProperStrand	101	chr7	116664819	116664899	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.7002
chr11	78313939	78313956	protein_coding	Vtn	exon	ENSMUSG00000017344	ProperStrand	188	chr8	32260397	32260425	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-2.5391
chr15	82980134	82980189	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr7	134671387	134671477	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-2.0534
chr8	73419574	73419870	protein_coding	Rpl18a	intron	ENSMUSG00000045128	ProperStrand	394	chr14	76247753	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	3	-3.3067
chr17	46861595	46861611	protein_coding	Pex6	exon	ENSMUSG00000002763	ProperStrand	292	chr2	179920335	179920355	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	1	-6.5469
chr11	119142387	119142426	protein_coding	Gaa	intron	ENSMUSG00000025579	ProperStrand	149	chr19	8800391	8800467	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-3.5364
chr12	17286408	17286467	protein_coding	Pdia6	exon	ENSMUSG00000020571	ProperStrand	114	chr14	52703977	52703997	protein_coding	Hnrnpc	exon	ENSMUSG00000060373	ProperStrand	75	2	-17.9930
chr6	142351130	142351168	protein_coding	Golt1b	utr3	ENSMUSG00000030245	ProperStrand	7	chr1	59539683	59539700	protein_coding	Fzd7	utr5	ENSMUSG00000041075	ProperStrand	373	1	-14.0780
chr11	75572857	75578135	protein_coding	Ywhae	exon	ENSMUSG00000020849	ProperStrand	176	chr18	20737676	20737693	protein_coding	Dsg2	exon	ENSMUSG00000044393	ProperStrand	60	5	-inf
chr7	150430838	150430855	protein_coding	Kcnq1	intron	ENSMUSG00000009545	ProperStrand	59	chr2	26494763	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.1372
chr1	133743568	133743610	protein_coding	Slc41a1	utr3	ENSMUSG00000013275	ProperStrand	19	chr19	8799835	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	3	-16.4350
chr2	154171683	154171700	protein_coding	Cdk5rap1	exon	ENSMUSG00000027487	ProperStrand	75	chr11	106019599	106019692	protein_coding	Limd2	utr3	ENSMUSG00000040699	ProperStrand	8	1	-16.9858
chr1	121380188	121401181	protein_coding	Ralb	utr5	ENSMUSG00000004451	ProperStrand	17	chr5	23830822	23830839	protein_coding	Kcnh2	exon	ENSMUSG00000038319	ProperStrand	242	1	-13.0788
chr5	31468906	31468951	protein_coding	Gtf3c2	intron	ENSMUSG00000029144	ProperStrand	22	chr2	181316563	181316579	protein_coding	Uckl1	exon	ENSMUSG00000089917	ProperStrand	142	1	-13.6188
chr12	112565198	112565215	protein_coding	Cdc42bpb	intron	ENSMUSG00000021279	ProperStrand	128	chr8	13416897	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-4.9731
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr4	124736325	124736344	protein_coding	Dnali1	exon	ENSMUSG00000042707	ProperStrand	45	1	-6.4720
chr3	144829868	144829885	SINE	B3A	B2	chr3B3A144829826	ProperStrand	4	chr14	76247711	76247753	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-9.7427
chr11	69554581	69554634	protein_coding	Polr2a	exon	ENSMUSG00000005198	ProperStrand	200	chr2	26493366	26493436	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	6	-10.9535
chr18	74511043	74511069	protein_coding	Ccdc11	intron	ENSMUSG00000035394	ProperStrand	3	chr6	124665248	124665264	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	2	-inf
chr1	120580673	120580689	protein_coding	Tfcp2l1	utr3	ENSMUSG00000026380	ProperStrand	158	chr4	43943351	43943367	protein_coding	Reck	intron	ENSMUSG00000028476	NonProperStrand	36	1	-12.4015
chr17	65962842	65962873	protein_coding	Vapa	utr5	ENSMUSG00000024091	ProperStrand	24	chr11	69483197	69483237	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.1173
chr11	78127136	78127330	protein_coding	Spag5	exon	ENSMUSG00000002055	ProperStrand	49	chr15	76003839	76003917	protein_coding	Plec	exon	ENSMUSG00000022565	ProperStrand	186	2	-18.1763
chr18	36591996	36592029	protein_coding	Pfdn1	exon	ENSMUSG00000024346	ProperStrand	12	chr4	131865884	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.6729
chr1	182740220	182740273	protein_coding-noncoding	H3f3a	utr3	ENSMUSG00000060743	ProperStrand	1	chr7	118219574	118219647	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-inf
chr6	142439080	142439096	protein_coding	Ldhb	exon	ENSMUSG00000030246	NonProperStrand	63	chr11	121121501	121121524	protein_coding	Foxk2	exon	ENSMUSG00000039275	ProperStrand	38	1	-14.1384
chr5	76613324	76613375	protein_coding	Tmem165	exon	ENSMUSG00000029234	ProperStrand	22	chr9	15119648	15119738	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-10.8663
chr7	29962220	29962246	protein_coding	Psmd8	exon	ENSMUSG00000030591	ProperStrand	23	chr11	87579357	87579374	protein_coding	Bzrap1	exon	ENSMUSG00000034156	ProperStrand	21	1	-17.1449
chr10	90560886	90560936	protein_coding	Ikbip	utr3	ENSMUSG00000019975	ProperStrand	12	chr12	88778655	88778745	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-9.7568
chr9	78023110	78023145	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr12	31943904	31943935	snoRNA	ENSMUSG00000065200_SNORA65	.	ENSMUSG00000065200	ProperStrand	19	1	-8.1798
chr19	4001900	4001959	protein_coding	Nudt8	exon	ENSMUSG00000024869	ProperStrand	3	chr1	102076757	102076790	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	3	-inf
mmu-miR-6240	1	23	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr2	181057133	181057149	protein_coding	Rtel1	exon	ENSMUSG00000038685	ProperStrand	22	1	-7.9078
chr10	82323286	82323349	protein_coding	Txnrd1	utr5	ENSMUSG00000020250	ProperStrand	47	chr3	108357288	108357378	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-5.0110
chr4	24577381	24577397	protein_coding	Klhl32	exon	ENSMUSG00000040387	NonProperStrand	2	chr8	82211461	82211606	protein_coding	Abce1	exon	ENSMUSG00000058355	ProperStrand	66	1	-inf
chr4	118805861	118806039	protein_coding	Slc2a1	exon	ENSMUSG00000028645	ProperStrand	361	chr12	88778632	88778722	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	2	-5.2945
chr7	28013488	28013506	protein_coding	Itpkc	exon	ENSMUSG00000003752	ProperStrand	10	chr4	141094179	141094197	protein_coding	Spen	utr5	ENSMUSG00000040761	ProperStrand	161	1	-15.0081
chr12	32172998	32173072	protein_coding	Cbll1	exon	ENSMUSG00000020659	ProperStrand	19	chr11	115448467	115448761	protein_coding	Gga3	exon	ENSMUSG00000020740	ProperStrand	44	1	-16.2811
chr4	96412508	96412526	protein_coding	Gm12695	intron	ENSMUSG00000078639	ProperStrand	110	chr18	73693163	73693192	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-4.3551
chr11	68067261	68067277	protein_coding	Ntn1	intron	ENSMUSG00000020902	NonProperStrand	194	chr11	6520377	6520442	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	1	-5.4036
chr9	78023155	78023245	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr9	99384415	99388285	protein_coding	Armc8	exon	ENSMUSG00000032468	ProperStrand	15	1	-8.6640
chr12	111931963	111932063	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-1.3500
chr13	108863457	108863504	protein_coding	Ndufaf2	intron	ENSMUSG00000068184	ProperStrand	11	chr17	24857716	24857754	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	3	-13.1235
chr19	53940393	53940409	protein_coding	Rbm20	utr3	ENSMUSG00000043639	ProperStrand	25	chr11	6428103	6428171	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.8448
chr2	29852026	29852301	protein_coding	Spna2	exon	ENSMUSG00000057738	ProperStrand	222	chr10	62228325	62228386	snoRNA	ENSMUSG00000080469_Snord98	.	ENSMUSG00000080469	ProperStrand	124	1	-9.2339
chr11	104987835	104987851	protein_coding	Mettl2	exon	ENSMUSG00000020691	ProperStrand	21	chr6	51433141	51433167	protein_coding	Cbx3	utr3	ENSMUSG00000029836	ProperStrand	19	1	-17.6481
chr11	32635307	32635325	protein_coding	Fbxw11	exon	ENSMUSG00000020271	NonProperStrand	31	chr9	15119648	15119738	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.8279
chr2	26494830	26494893	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chrX	101395854	101395872	protein_coding	C77370	intron	ENSMUSG00000046449	ProperStrand	10	1	-9.8302
chr2	4915704	4915725	protein_coding	Mcm10	exon	ENSMUSG00000026669	ProperStrand	21	chr7	148428268	148428345	protein_coding	Phrf1	intron	ENSMUSG00000038611	ProperStrand	86	5	-20.1264
chr19	35044528	35046897	protein_coding	Kif20b	exon	ENSMUSG00000024795	ProperStrand	45	chr9	62225523	62225588	protein_coding	Anp32a	utr3	ENSMUSG00000032249	ProperStrand	75	1	-13.4466
chr8	74446729	74446745	protein_coding	Zfp617	intron	ENSMUSG00000066880	NonProperStrand	208	chr9	114424978	114434129	protein_coding	Trim71	exon	ENSMUSG00000079259	ProperStrand	162	1	-8.8300
chr4	43505654	43505718	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr7	29606977	29607007	protein_coding	Hnrnpl	utr3	ENSMUSG00000015165	ProperStrand	150	1	-1.5534
chr1	71660381	71660461	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr5	117733085	117733175	protein_coding	Pebp1	utr3	ENSMUSG00000032959	ProperStrand	54	1	-8.0438
chr17	34198440	34198456	protein_coding	Col11a2	exon	ENSMUSG00000024330	ProperStrand	14	chr9	15119631	15119695	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.3767
chr10	79202440	79202495	protein_coding	Polrmt	exon	ENSMUSG00000020329	ProperStrand	11	chr2	178087336	178089632	protein_coding	Sycp2	exon	ENSMUSG00000060445	NonProperStrand	5	1	-19.4286
chr14	85930769	85930786	LTR	MMERVK10C-int	ERVK	chr14MMERVK10C-int85928638	ProperStrand	2	chr7	16524110	16524136	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	1	-17.3223
chr11	26368386	26368413	protein_coding	Fancl	exon	ENSMUSG00000004018	ProperStrand	5	chr10	80644277	80644323	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-11.2328
chr2	32563527	32563545	protein_coding	Cdk9	exon	ENSMUSG00000009555	NonProperStrand	49	chr1	121458185	121458202	protein_coding	Epb4.1l5	intron	ENSMUSG00000026383	NonProperStrand	28	1	-15.2685
chr2	4974190	4974207	protein_coding	Optn	exon	ENSMUSG00000026672	ProperStrand	451	chr10	23505584	23505627	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-3.6430
chr16	8689098	8689114	protein_coding	Usp7	utr3	ENSMUSG00000022710	NonProperStrand	11	chr8	98270013	98270095	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	2	-14.3410
chrX	72351011	72351077	protein_coding	Dkc1	exon	ENSMUSG00000031403	ProperStrand	89	chr16	23111389	23111505	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	7	-8.6230
chr3	104626025	104626115	protein_coding	Capza1	utr3	ENSMUSG00000070372	ProperStrand	42	chr4	131865856	131865936	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	5	-11.2505
chr9	78023181	78023203	misc_RNA	7SK	.	ENSMUSG00000065037	NonProperStrand	6	chr3	123210876	123210976	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	NonProperStrand	45	3	-18.9999
chr4	155544754	155544803	protein_coding	Agrn	exon	ENSMUSG00000041936	ProperStrand	175	chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	1	-6.4659
chr11	43233866	43233966	protein_coding	Pttg1	utr3	ENSMUSG00000020415	ProperStrand	6	chr9	15118329	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-8.0740
chr5	66703758	66703777	protein_coding	Apbb2	intron	ENSMUSG00000029207	NonProperStrand	14	chr4	116828379	116828453	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-11.3395
chr11	30785365	30785381	protein_coding	Gpr75	utr5	ENSMUSG00000043999	ProperStrand	1	chr16	23110480	23110570	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-inf
chr12	52849618	52849634	protein_coding	Hectd1	exon	ENSMUSG00000035247	NonProperStrand	43	chr7	133023520	133023568	protein_coding	Gsg1l	utr3	ENSMUSG00000046182	ProperStrand	14	1	-17.1673
chr9	104095068	104099494	protein_coding	Dnajc13	exon	ENSMUSG00000032560	ProperStrand	60	chr4	131865434	131865460	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-4.0022
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr13	97251936	97312437	protein_coding	Polk	utr3	ENSMUSG00000021668	NonProperStrand	25	2	-15.1291
chr10	40307396	40307412	protein_coding	Slc22a16	exon	ENSMUSG00000019834	NonProperStrand	11	chr7	117189863	117189888	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-9.6452
chr1	88247742	88247832	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	chr18	75160711	75160751	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	1	-1.4667
chr2	25765396	25765412	protein_coding	Kcnt1	exon	ENSMUSG00000058740	NonProperStrand	7	chr9	64023228	64023264	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	1	-12.8654
chr10	23505151	23505238	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	NonProperStrand	45	chr8	73419683	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	NonProperStrand	53	2	-20.1475
chr7	72447986	72448021	protein_coding	Tjp1	exon	ENSMUSG00000030516	ProperStrand	78	chr9	15119968	15120041	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-6.7321
chr9	36540155	36540172	protein_coding	Stt3a	utr3	ENSMUSG00000032116	NonProperStrand	2	chr1	79704061	79704121	protein_coding	Wdfy1	exon	ENSMUSG00000073643	ProperStrand	11	1	-21.3789
chr3	145312706	145312796	protein_coding	Cyr61	utr5	ENSMUSG00000028195	ProperStrand	13	chr18	35716766	35716846	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.9970
chr11	78059397	78059413	protein_coding	Supt6h	utr5	ENSMUSG00000002052	ProperStrand	119	chr16	56035865	56035978	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	1	-7.5780
chr8	13940153	13940174	protein_coding	Fbxo25	utr3	ENSMUSG00000038365	ProperStrand	7	chr8	73115775	73115791	protein_coding	Ell	utr3	ENSMUSG00000070002	NonProperStrand	134	1	-16.1237
chr8	59992796	59992886	protein_coding	Hmgb2	exon	ENSMUSG00000054717	ProperStrand	184	chr4	131865411	131865491	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-2.0236
chr11	78214290	78214307	antisense	Gm11194	.	ENSMUSG00000085747	ProperStrand	35	chr16	23111770	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-4.9145
chr3	98023350	98023367	LINE	Lx9	L1	chr3Lx998023319	ProperStrand	23	chr8	32260373	32260422	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-6.5150
chr12	89699698	89699714	protein_coding	Adck1	utr3	ENSMUSG00000021044	NonProperStrand	42	chr7	117189863	117189943	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	2	-11.1531
chr8	87362493	87362542	protein_coding	Rad23a	exon	ENSMUSG00000003813	ProperStrand	10	chr11	44333023	44333039	protein_coding	Rnf145	utr5	ENSMUSG00000019189	NonProperStrand	20	1	-18.7347
chr1	158578517	158578607	protein_coding	Abl2	utr3	ENSMUSG00000026596	ProperStrand	37	chr2	26494722	26494802	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.0004
chr16	90386836	90386853	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	chr7	116663649	116663739	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-3.0099
chr5	111084787	111084830	protein_coding	Ddx51	exon	ENSMUSG00000029504	ProperStrand	54	chr8	81922455	81922545	protein_coding	Smad1	intron	ENSMUSG00000031681	ProperStrand	45	1	-14.1043
chr14	31953025	31953118	protein_coding	Stab1	exon	ENSMUSG00000042286	NonProperStrand	127	chr19	8963027	8963051	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.1421
chr11	5682123	5682139	pseudogene	2210015D19Rik	.	ENSMUSG00000083844	ProperStrand	24	chr16	23110840	23110892	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.3518
chr7	87513142	87513158	protein_coding	Man2a2	exon	ENSMUSG00000038886	NonProperStrand	4	chr1	162966190	162966213	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-13.2442
chr7	20310054	20310070	protein_coding	Pvrl2	exon	ENSMUSG00000062300	ProperStrand	110	chr5	121655016	121655100	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.6553
chr17	36063784	36063954	protein_coding	Ppp1r10	exon	ENSMUSG00000039220	ProperStrand	45	chr14	96988123	96988178	snoRNA	ENSMUSG00000064581_SNORA30	.	ENSMUSG00000064581	ProperStrand	146	1	-12.1093
chr7	97325200	97325245	protein_coding	Picalm	exon	ENSMUSG00000039361	ProperStrand	23	chr1	162965539	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-8.4374
chr12	109921435	109921584	protein_coding	Evl	exon	ENSMUSG00000021262	ProperStrand	9	chr4	131865891	131865981	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.2544
chr3	106525158	106525197	protein_coding	4933421E11Rik	intron	ENSMUSG00000056260	ProperStrand	18	chr9	120037911	120037967	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	2	-11.4626
chr14	61113419	61113436	LINE	L1MB3	L1	chr14L1MB361113375	NonProperStrand	72	chr19	8963062	8963083	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.9763
chr8	47661713	47663650	protein_coding	Mlf1ip	exon	ENSMUSG00000031629	ProperStrand	25	chr2	130101260	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-8.3452
chr16	57391603	57391684	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr4	131866150	131866283	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	NonProperStrand	19	2	-19.1835
chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	chr18	73693119	73693139	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-1.0313
chr10	80507540	80507562	protein_coding	Sgta	utr3	ENSMUSG00000004937	ProperStrand	17	chr4	131865856	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.9909
chr10	85420407	85420492	protein_coding	D10Wsu52e	utr5	ENSMUSG00000001783	ProperStrand	45	chr16	23111403	23111493	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.6772
chr18	36961520	36961549	misc_RNA	Vault	.	ENSMUSG00000065145	ProperStrand	177	chr7	117189925	117190025	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	4	-6.2213
chr8	105560721	105560738	LINE	L1VL4	L1	chr8L1VL4105560332	NonProperStrand	17	chr17	24665420	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-7.4472
chr17	87204586	87204642	protein_coding	Epas1	exon	ENSMUSG00000024140	ProperStrand	62	chrX	156549303	156549321	protein_coding	Map3k15	intron	ENSMUSG00000031303	ProperStrand	26	1	-14.9409
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr9	64022854	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-2.0030
chr13	97948409	97948500	protein_coding	Hexb	intron	ENSMUSG00000021665	ProperStrand	22	chr16	8830224	8830267	protein_coding	1810013L24Rik	utr5	ENSMUSG00000022507	ProperStrand	20	1	-17.4774
chr7	106628499	106628543	protein_coding	Rps3	exon	ENSMUSG00000030744	ProperStrand	159	chr5	30442894	30442911	protein_coding	Fam59b	exon	ENSMUSG00000044576	NonProperStrand	20	2	-20.4794
chr5	121655032	121655132	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	NonProperStrand	38	chr3	123210908	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	NonProperStrand	45	1	-14.8270
chr17	15659794	15659852	protein_coding	Pdcd2	exon	ENSMUSG00000014771	ProperStrand	4	chr4	131908352	131908710	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-6.2660
chr8	72709011	72709091	protein_coding	Slc25a42	utr3	ENSMUSG00000002346	NonProperStrand	7	chr19	46145073	46145163	protein_coding	Pprc1	intron	ENSMUSG00000055491	ProperStrand	143	1	-15.9656
chr11	58682398	58682491	protein_coding	2810021J22Rik	utr5	ENSMUSG00000020491	ProperStrand	162	chr4	131865901	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.1216
chr1	72272860	72272969	snRNA	ENSMUSG00000075752_U2	.	ENSMUSG00000075752	ProperStrand	535	chr18	35716740	35716865	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	9	-3.2919
chr2	118753483	118753551	protein_coding	Chst14	utr3	ENSMUSG00000074916	ProperStrand	32	chr16	23110454	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.5869
chr5	74489236	74489326	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr7	16525533	16527119	protein_coding	Gltscr2	exon	ENSMUSG00000041560	ProperStrand	127	1	-4.1782
chr2	129998689	129998713	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr10	128257530	128257546	protein_coding	Ormdl2	utr5	ENSMUSG00000025353	ProperStrand	51	1	-8.4349
chr3	88684264	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr16	23111372	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	42	-10.0114
chr13	37119809	37119827	protein_coding	F13a1	intron	ENSMUSG00000039109	NonProperStrand	15	chr18	35716817	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-11.4326
chr12	70269861	70269879	protein_coding	Lrr1	exon	ENSMUSG00000034883	ProperStrand	26	chr16	23110914	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.2392
chr2	120872244	120872260	protein_coding	Tgm5	exon	ENSMUSG00000053675	NonProperStrand	163	chr11	62416951	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-4.1141
chr4	132109480	132109503	protein_coding	Dnajc8	utr3	ENSMUSG00000054405	ProperStrand	22	chr16	23110842	23110940	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.4786
chr11	100275659	100275677	protein_coding	Leprel4	exon	ENSMUSG00000006931	ProperStrand	32	chr2	127416746	127416772	protein_coding	Mrps5	intron	ENSMUSG00000027374	ProperStrand	84	1	-13.9123
chr13	63981587	63981603	protein_coding	0610007P08Rik	intron	ENSMUSG00000021470	ProperStrand	26	chr3	130431763	130431978	protein_coding	Rpl34	exon	ENSMUSG00000062006	ProperStrand	51	1	-15.3449
chr12	113982919	113982983	protein_coding	AW555464	exon	ENSMUSG00000072825	ProperStrand	96	chr9	15119715	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-5.1774
chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	chr2	130101972	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-2.7194
chr5	110741119	110741805	protein_coding	Pole	exon	ENSMUSG00000007080	ProperStrand	125	chr8	129468789	129468879	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-3.0541
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chrX	103395870	103395960	protein_coding	Pgk1	intron	ENSMUSG00000062070	ProperStrand	484	4	-12.2355
chr9	108465065	108465095	protein_coding	Impdh2	intron	ENSMUSG00000062867	ProperStrand	74	chr5	74489564	74489673	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-3.3908
chr1	98080885	98080901	LINE	Lx	L1	chr1Lx98080668	ProperStrand	6	chr11	106362570	106362635	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-12.1528
chr5	100855902	100855943	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr9	120037949	120038049	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	4	-0.9736
chr15	34012952	34013052	protein_coding	Mtdh	exon	ENSMUSG00000022255	NonProperStrand	2	chr9	70626033	70626050	protein_coding	Adam10	utr3	ENSMUSG00000054693	ProperStrand	12	1	-inf
chr5	100855944	100855974	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr13	56353448	56353465	protein_coding	Neurog1	utr5	ENSMUSG00000048904	ProperStrand	105	1	-5.5375
chr10	90624811	90624838	protein_coding	Tmpo	exon	ENSMUSG00000019961	ProperStrand	57	chr11	6428060	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-5.6316
chr4	43505840	43505930	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr17	56732685	56732703	protein_coding	Safb	intron	ENSMUSG00000071054	ProperStrand	79	1	-2.5861
chr19	28428724	28428740	protein_coding	Glis3	exon	ENSMUSG00000052942	NonProperStrand	14	chr17	35089181	35089246	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-8.4048
chrX	71024986	71025324	protein_coding	Idh3g	exon	ENSMUSG00000002010	ProperStrand	10	chr17	13112532	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-8.1682
chr10	41644311	41644329	protein_coding	Armc2	exon	ENSMUSG00000071324	ProperStrand	281	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-2.3613
chr4	43505656	43505723	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	2	-0.8095
chr15	72934215	72934274	protein_coding	Eif2c2	utr3	ENSMUSG00000036698	ProperStrand	154	chr9	15119363	15119425	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-3.3313
chr15	94116778	94116794	protein_coding	Adamts20	exon	ENSMUSG00000022449	ProperStrand	5	chr7	25670551	25673321	protein_coding	Rps19	exon	ENSMUSG00000040952	ProperStrand	101	1	-17.3784
chr4	116826699	116826766	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	chr4	122968676	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	2	-1.4561
chr2	90235296	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	5	-5.4047
chr18	85020792	85020882	protein_coding	Cyb5	utr5	ENSMUSG00000024646	ProperStrand	12	chr11	69481395	69481475	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-6.3220
chr17	35209110	35209129	protein_coding	Ly6g6d	intron	ENSMUSG00000073413	NonProperStrand	3	chr16	23110455	23110477	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-8.5395
chr9	40610045	40610064	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr5	130295494	130295526	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-0.8762
chr9	50816824	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	chr3	104880588	104880702	protein_coding	4930564D02Rik	utr5	ENSMUSG00000051788	ProperStrand	28	1	-13.3488
chrX	84483692	84483715	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr8	87525135	87525238	protein_coding	Hook2	exon	ENSMUSG00000052566	ProperStrand	204	1	-5.8265
chr7	52382237	52382302	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	chr16	18240811	18240889	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	1	-4.1920
chr5	31813629	31813680	protein_coding	Gpn1	utr3	ENSMUSG00000064037	ProperStrand	12	chr7	148634702	148634792	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	10	-inf
chr4	140387550	140387567	protein_coding	Padi1	intron	ENSMUSG00000025329	NonProperStrand	13	chr4	57963760	57964690	protein_coding	Txn1	exon	ENSMUSG00000028367	ProperStrand	31	1	-17.4819
chr2	93653559	93653586	protein_coding	Ext2	exon	ENSMUSG00000027198	ProperStrand	49	chr2	26494711	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	5	-14.8677
chrX	139210682	139210699	pseudogene	Gm15049	.	ENSMUSG00000081463	ProperStrand	2	chr12	72070146	72070183	tRNA	tRNA790-LysCTT	.	1672934	ProperStrand	6	1	-inf
chr8	72334599	72334615	protein_coding	Gmip	exon	ENSMUSG00000036246	ProperStrand	102	chr2	130101241	130101310	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-5.5478
chr5	143105610	143105639	protein_coding	Wipi2	utr5	ENSMUSG00000029578	ProperStrand	49	chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	1	-10.2397
chr1	94975412	94978940	protein_coding	Kif1a	exon	ENSMUSG00000014602	ProperStrand	18	chr8	108140183	108140231	protein_coding	Fam65a	exon	ENSMUSG00000038604	ProperStrand	19	1	-17.9943
chr3	88346662	88346678	protein_coding	Rab25	exon	ENSMUSG00000008601	ProperStrand	3	chr4	131908809	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-12.0505
chr6	88435849	88435865	protein_coding	Ruvbl1	exon	ENSMUSG00000030079	NonProperStrand	54	chr17	24858126	24858178	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	1	-9.8649
chr11	62416575	62416595	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	1	-5.1997
chr19	10699316	10699677	protein_coding	Ddb1	exon	ENSMUSG00000024740	ProperStrand	304	chr4	124736325	124736344	protein_coding	Dnali1	exon	ENSMUSG00000042707	ProperStrand	45	1	-10.6409
chr6	85396266	85396335	protein_coding	Smyd5	utr3	ENSMUSG00000033706	NonProperStrand	30	chr7	116664819	116664909	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.8023
chr11	51807584	51807634	protein_coding	Ube2b	intron	ENSMUSG00000020390	ProperStrand	57	chr17	13112525	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	4	-14.7537
chr17	57135425	57135510	protein_coding	Clpp	utr3	ENSMUSG00000002660	ProperStrand	15	chr18	35716754	35716844	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-11.4326
chr5	123622050	123622066	protein_coding	Hpd	exon	ENSMUSG00000029445	ProperStrand	254	chr10	80642459	80642508	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-3.3468
chr10	77525985	77526092	protein_coding	Dnmt3l	exon	ENSMUSG00000000730	ProperStrand	37	chr2	121949511	121949528	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	3	-20.1243
chr17	45767490	45767507	protein_coding	Capn11	utr3	ENSMUSG00000058626	NonProperStrand	5	chr16	23110843	23110860	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr9	34862800	34862827	protein_coding	St3gal4	exon	ENSMUSG00000032038	ProperStrand	10	chr19	8799054	8799094	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	4	-inf
chr2	129998665	129998715	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr15	25737499	25737584	protein_coding	Myo10	exon	ENSMUSG00000022272	ProperStrand	168	3	-13.9250
chr18	67575177	67575248	protein_coding	Afg3l2	exon	ENSMUSG00000024527	ProperStrand	43	chr2	130102056	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	4	-18.1982
chr1	162966234	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	chr3	68889086	68889186	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	10	-3.7439
chr8	96076377	96076457	LINE	L1M4	L1	chr8L1M496076216	NonProperStrand	1	chr8	96075903	96075993	SINE	B4A	B4	chr8B4A96075901	NonProperStrand	1	1	-inf
chr15	79663185	79663242	protein_coding	Cbx6	intron	ENSMUSG00000089715	ProperStrand	16	chr19	8799857	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-7.5773
chr3	153574588	153574635	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	chr8	32260335	32260410	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	2	-2.7489
chr6	34107021	34107123	protein_coding	Slc35b4	utr3	ENSMUSG00000018999	ProperStrand	11	chr17	6232006	6232022	protein_coding	Tulp4	exon	ENSMUSG00000034377	NonProperStrand	265	1	-13.7990
chr13	38064360	38064376	protein_coding	Ssr1	utr3	ENSMUSG00000021427	ProperStrand	65	chr4	131908356	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.3054
chr2	168009104	168009204	protein_coding	Adnp	exon	ENSMUSG00000051149	ProperStrand	48	chr11	97642952	97643011	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	6	-15.9252
chr11	82601253	82601278	protein_coding	Lig3	exon	ENSMUSG00000020697	ProperStrand	34	chr5	135858158	135858240	protein_coding	Pom121	exon	ENSMUSG00000053293	ProperStrand	127	1	-12.9552
chr16	23111372	23111505	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	chr5	92485086	92485218	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	13	-1.8266
chr10	13102389	13102407	protein_coding-noncoding	Phactr2	utr3	ENSMUSG00000062866	NonProperStrand	8	chr18	35716763	35716788	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-5.9895
chr18	35113831	35113907	protein_coding	Hspa9	utr5	ENSMUSG00000024359	ProperStrand	166	chr4	134926614	134927796	protein_coding	A330049M08Rik	exon	ENSMUSG00000043924	ProperStrand	130	1	-9.7199
chr12	106269353	106269445	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	chr1	9932549	9932590	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	4	-1.5780
chr17	35972494	35973580	protein_coding	Tubb5	exon	ENSMUSG00000001525	ProperStrand	624	chr5	108336378	108336490	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-1.8729
chr8	66704297	66704313	LTR	MTD	MaLR	chr8MTD66704270	ProperStrand	12	chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-9.7127
chr8	87489333	87489540	protein_coding	Rnaseh2a	exon	ENSMUSG00000052926	ProperStrand	14	chr7	150717299	150717389	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-8.4270
chr2	93042379	93042398	protein_coding	Tspan18	utr3	ENSMUSG00000027217	ProperStrand	4	chr5	103854542	103854558	protein_coding	Ptpn13	utr5	ENSMUSG00000034573	NonProperStrand	74	1	-18.5265
chr8	34693168	34693184	protein_coding	Tex15	exon	ENSMUSG00000009628	NonProperStrand	31	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-10.2580
chr1	137049091	137049115	protein_coding	Arl8a	exon	ENSMUSG00000026426	ProperStrand	12	chr10	23506231	23506331	protein_coding	Rps12	intron	ENSMUSG00000061983	ProperStrand	309	1	-13.3142
chr11	58998786	58998866	protein_coding-noncoding	Guk1	utr3	ENSMUSG00000020444	ProperStrand	12	chr11	58998582	58998752	protein_coding	Guk1	exon	ENSMUSG00000020444	ProperStrand	18	12	-inf
chr6	124763595	124763612	protein_coding	Tpi1	intron	ENSMUSG00000023456	NonProperStrand	7	chr17	33960264	33961382	protein_coding	Rps28	exon	ENSMUSG00000067288	ProperStrand	52	1	-18.0073
chr1	74827444	74827464	protein_coding	Wnt6	intron	ENSMUSG00000033227	ProperStrand	16	chr16	23110897	23110960	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.9771
chr11	69825557	69825574	protein_coding	Acadvl	intron	ENSMUSG00000018574	ProperStrand	19	chr7	116664793	116664856	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-4.6802
chr1	152291523	152291578	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	chr10	90581100	90581190	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-1.0693
chr7	117166753	117166853	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	chr3	85942711	85942773	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	1	-1.6432
chr4	22414139	22414155	protein_coding	Pou3f2	exon	ENSMUSG00000052621	NonProperStrand	90	chr2	26768560	26768717	protein_coding	Rpl7a	exon	ENSMUSG00000062647	ProperStrand	234	1	-9.7702
chr5	23926091	23926335	protein_coding	Cdk5	exon	ENSMUSG00000028969	ProperStrand	2	chr7	116663675	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-9.6916
chr6	142441106	142441196	protein_coding	Ldhb	intron	ENSMUSG00000030246	ProperStrand	224	chr16	38158134	38158214	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	4	-18.1627
chr11	22890815	22890862	protein_coding	Cct4	exon	ENSMUSG00000007739	ProperStrand	81	chr10	23505152	23505235	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-2.8526
chr14	35124022	35124093	protein_coding	Glud1	utr5	ENSMUSG00000021794	ProperStrand	72	chr9	39882020	39882036	protein_coding	Olfr982	exon	ENSMUSG00000049010	NonProperStrand	35	1	-14.0371
chr8	13416896	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr4	125181770	125181884	pseudogene	Ftl2	.	ENSMUSG00000082062	ProperStrand	3	1	-12.7981
chr9	65913475	65914198	protein_coding	Ppib	exon	ENSMUSG00000032383	ProperStrand	31	chr7	148634765	148634837	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-5.2566
chr11	77996558	77996583	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	chr9	40611665	40611739	snoRNA	ENSMUSG00000075876_Snord14c	.	ENSMUSG00000075876	ProperStrand	104	1	-5.0184
chr1	187912393	187912444	protein_coding	Lyplal1	utr3	ENSMUSG00000039246	ProperStrand	10	chr10	23505151	23505203	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-14.6690
chr11	75578780	75578831	protein_coding	Ywhae	utr3	ENSMUSG00000020849	ProperStrand	176	chr9	63042015	63042031	protein_coding	Map2k5	exon	ENSMUSG00000058444	ProperStrand	193	1	-8.8140
chr11	74497934	74497957	protein_coding	Pafah1b1	exon	ENSMUSG00000020745	ProperStrand	20	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-9.4173
chr19	3683044	3683144	protein_coding	Lrp5	intron	ENSMUSG00000024913	ProperStrand	145	chr6	94776857	94776875	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	1	-7.3405
chr17	8735100	8735117	protein_coding	Pde10a	intron	ENSMUSG00000023868	NonProperStrand	78	chr7	116663645	116663692	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.0734
chr12	36194428	36194447	protein_coding	Ahr	intron	ENSMUSG00000019256	ProperStrand	4	chr2	91436308	91436336	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-13.1638
chr1	71666049	71667312	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr6	90355435	90356025	protein_coding	Ccdc37	exon	ENSMUSG00000048794	ProperStrand	6	2	-18.5834
chr11	4986035	4986062	protein_coding	Ewsr1	exon	ENSMUSG00000009079	ProperStrand	248	chr11	77996574	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-3.3837
chr7	106627806	106627878	protein_coding	Rps3	exon	ENSMUSG00000030744	ProperStrand	159	chr7	118219574	118219606	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	3	-6.3846
chr7	125093250	125093267	SINE	B4A	B4	chr7B4A125093149	ProperStrand	1	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-inf
chr12	72089545	72089562	protein_coding	Psma3	intron	ENSMUSG00000060073	ProperStrand	20	chr7	52381737	52381758	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	2	-15.5104
chr19	8838604	8838635	protein_coding	Nxf1	exon	ENSMUSG00000010097	ProperStrand	13	chr3	123210851	123210933	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-11.8151
chr11	72257248	72257337	protein_coding	Mybbp1a	exon	ENSMUSG00000040463	ProperStrand	279	chr19	8848106	8848834	protein_coding	Tmem179b	exon	ENSMUSG00000079437	NonProperStrand	3	3	-inf
chr6	87793699	87793740	protein_coding	Cnbp	utr3	ENSMUSG00000030057	ProperStrand	46	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	3	-9.9552
chr4	131865899	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr12	110918156	110918219	snoRNA	ENSMUSG00000065749_AF357428	.	ENSMUSG00000065749	ProperStrand	218	6	-3.9147
chr19	61195105	61195124	processed_transcript	5830428H23Rik	.	ENSMUSG00000074733	ProperStrand	4	chr11	82601282	82602273	protein_coding	Lig3	exon	ENSMUSG00000020697	ProperStrand	34	2	-19.1078
chr1	72207058	72207158	protein_coding	Mreg	utr3	ENSMUSG00000039395	ProperStrand	63	chr17	35087896	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-5.1054
chr14	21211184	21211272	protein_coding	Mrps16	exon	ENSMUSG00000049960	ProperStrand	2	chr7	116663715	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-9.6916
chr2	129998643	129998664	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	3	-2.7799
chr9	53378516	53378554	protein_coding	Npat	exon	ENSMUSG00000033054	ProperStrand	20	chr2	26494708	26494736	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.1919
chr3	124024883	124024899	protein_coding	Tram1l1	exon	ENSMUSG00000044528	NonProperStrand	1	chr12	21330179	21330195	protein_coding	Adam17	utr3	ENSMUSG00000052593	NonProperStrand	2	1	-inf
chr12	110981615	110981652	lincRNA	Mirg	intron	ENSMUSG00000091158	ProperStrand	15	chr6	146991382	146991398	protein_coding	Mrps35	exon	ENSMUSG00000040112	NonProperStrand	27	1	-17.7183
chr5	74489234	74489324	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr8	81922465	81922545	protein_coding	Smad1	intron	ENSMUSG00000031681	ProperStrand	45	1	-6.1882
chr18	39934974	39934990	protein_coding	Pabpc2	exon	ENSMUSG00000051732	NonProperStrand	66	chr11	6428062	6428156	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.0209
chr6	119376465	119376483	LINE	Lx9	L1	chr6Lx9119375949	NonProperStrand	3	chr13	55105923	55105939	protein_coding	Unc5a	exon	ENSMUSG00000025876	NonProperStrand	96	1	-18.7103
chr8	74014978	74015001	protein_coding	Gtpbp3	exon	ENSMUSG00000007610	ProperStrand	21	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-10.2801
chr7	150463677	150463694	protein_coding	Kcnq1	intron	ENSMUSG00000009545	ProperStrand	59	chr12	92811827	92811927	protein_coding	Gtf2a1	intron	ENSMUSG00000020962	ProperStrand	61	4	-19.0418
chr15	78982035	78982051	protein_coding	Polr2f	exon	ENSMUSG00000033020	NonProperStrand	71	chr12	88778701	88778734	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	2	-10.0054
chr13	47194793	47194811	protein_coding	Dek	exon	ENSMUSG00000021377	ProperStrand	36	chr15	99556356	99556372	protein_coding	2310016M24Rik	intron	ENSMUSG00000023020	NonProperStrand	7	1	-18.6891
chr5	75380950	75380966	LINE	L3	CR1	chr5L375380904	NonProperStrand	4	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-16.0823
chr7	134010061	134010161	protein_coding	Taok2	exon	ENSMUSG00000059981	ProperStrand	47	chr11	62416600	62416656	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-9.2281
chr15	82725599	82725636	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	chr11	69481364	69481464	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	4	-1.2976
chr4	21606097	21606114	protein_coding	Prdm13	exon	ENSMUSG00000040478	ProperStrand	51	chr6	119058336	119058355	protein_coding	Cacna1c	intron	ENSMUSG00000051331	NonProperStrand	49	1	-14.0552
chr17	3163084	3164208	protein_coding	Scaf8	exon	ENSMUSG00000046201	ProperStrand	126	chr8	32260343	32260423	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	13	-20.0322
chr10	58901362	58901379	protein_coding	Oit3	exon	ENSMUSG00000009654	NonProperStrand	11	chr16	21926480	21926496	protein_coding	Map3k13	exon	ENSMUSG00000033618	ProperStrand	16	1	-19.2002
chr7	151765212	151765228	antisense	Gm10574	.	ENSMUSG00000073778	ProperStrand	357	chr18	75161533	75161555	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-3.7507
chr11	120672091	120672241	protein_coding	Fasn	exon	ENSMUSG00000025153	ProperStrand	298	chr2	144087323	144087440	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	3	-8.6042
chr5	66347659	66347678	protein_coding	Chrna9	intron	ENSMUSG00000029205	ProperStrand	10	chr8	127404157	127404175	protein_coding	Gnpat	exon	ENSMUSG00000031985	ProperStrand	20	1	-18.7347
chr11	115884724	115884811	protein_coding	H3f3b	exon	ENSMUSG00000016559	ProperStrand	76	chr11	11721839	11721856	protein_coding	Ddc	intron	ENSMUSG00000020182	ProperStrand	19	1	-15.1682
chr18	80460275	80480087	protein_coding	Pqlc1	exon	ENSMUSG00000034006	ProperStrand	3	chr10	23505202	23505282	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-6.9610
chr2	32817265	32817299	protein_coding	Rpl12	utr5	ENSMUSG00000038900	ProperStrand	167	chr6	71832550	71832641	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-3.6570
chr1	33828651	33828669	protein_coding	Zfp451	intron	ENSMUSG00000042197	NonProperStrand	393	chr2	130101241	130101307	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-3.0134
chr5	124029284	124029388	protein_coding	Clip1	utr3	ENSMUSG00000049550	ProperStrand	27	chr1	162967520	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	5	-19.5718
chr18	60730453	60730514	protein_coding	Rbm22	exon	ENSMUSG00000024604	ProperStrand	9	chr4	131866155	131866245	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	4	-19.4079
chr3	89070964	89070981	protein_coding	Dpm3	utr3	ENSMUSG00000042737	NonProperStrand	1	chr11	62416604	62416640	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-inf
chr11	75578659	75578763	protein_coding	Ywhae	utr3	ENSMUSG00000020849	ProperStrand	176	chr11	115569726	115569744	protein_coding	Grb2	utr5	ENSMUSG00000059923	NonProperStrand	1	1	-inf
chr6	47731646	47731676	misc_RNA	Y_RNA	.	ENSMUSG00000064945	ProperStrand	93	chr19	8799052	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-4.9788
chr10	122382480	122382496	protein_coding	Ppm1h	utr3	ENSMUSG00000034613	NonProperStrand	21	chr6	115758066	115758120	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-7.5625
chr18	75161563	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	chr15	79908960	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	4	-2.8912
chr12	106909723	106909788	protein_coding	Atg2b	exon	ENSMUSG00000041341	ProperStrand	67	chr2	26766969	26767027	protein_coding	Rpl7a	exon	ENSMUSG00000062647	ProperStrand	234	1	-10.3624
chr6	125089835	125089910	protein_coding	Nop2	exon	ENSMUSG00000038279	ProperStrand	39	chr16	23111742	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.6215
chr4	41173317	41174232	protein_coding	Ubap2	exon	ENSMUSG00000028433	ProperStrand	292	chrX	22812879	22812910	protein_coding	Klhl13	exon	ENSMUSG00000036782	ProperStrand	7	2	-22.1666
chr5	15860405	15860421	protein_coding	Cacna2d1	exon	ENSMUSG00000040118	ProperStrand	12	chrX	103390096	103392242	protein_coding	Pgk1	exon	ENSMUSG00000062070	ProperStrand	484	1	-12.4143
chr4	120569575	120569665	LINE	L1M5	L1	chr4L1M5120569592	ProperStrand	1	chr4	106325778	106325858	protein_coding	Pars2	exon	ENSMUSG00000043572	ProperStrand	6	1	-inf
chr17	23955820	23955838	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	chrX	34622905	34622963	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	3	-4.6862
chr3	132371601	132371628	protein_coding	Tbck	intron	ENSMUSG00000028030	ProperStrand	11	chr19	8800373	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-6.8583
chr1	138844728	138844744	protein_coding	Nr5a2	intron	ENSMUSG00000026398	ProperStrand	43	chr8	73419731	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.7421
chr9	78328377	78328425	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	1	-3.0333
chr19	5758600	5758634	protein_coding	Scyl1	exon	ENSMUSG00000024941	ProperStrand	59	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-3.6233
chr16	33243331	33243371	protein_coding	Osbpl11	utr3	ENSMUSG00000022807	ProperStrand	31	chr18	35716833	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.3259
chr15	79506255	79506288	protein_coding	Josd1	utr3	ENSMUSG00000022426	ProperStrand	13	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-4.2316
chr17	45650656	45650708	protein_coding	Aars2	intron	ENSMUSG00000023938	ProperStrand	14	chr11	97642952	97642972	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-5.1980
chr19	46022236	46022252	protein_coding	9130011E15Rik	intron	ENSMUSG00000039901	ProperStrand	129	chr5	65780361	65780742	protein_coding	Rpl9	exon	ENSMUSG00000047215	ProperStrand	113	1	-10.5052
chr7	13516173	13516198	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr19	31157628	31157644	protein_coding	Cstf2t	exon	ENSMUSG00000053536	ProperStrand	48	1	-9.1144
chr10	127924563	127924626	protein_coding	Smarcc2	exon	ENSMUSG00000025369	ProperStrand	16	chr7	134110716	134111233	protein_coding	Sez6l2	exon	ENSMUSG00000030683	ProperStrand	94	1	-15.0794
chr7	86599716	86599806	protein_coding-noncoding	Polg	utr3	ENSMUSG00000039176	NonProperStrand	1	chr7	86599487	86599577	protein_coding	Polg	exon	ENSMUSG00000039176	NonProperStrand	3	1	-inf
chr8	61391767	61391783	protein_coding	BC030500	exon	ENSMUSG00000049946	NonProperStrand	12	chr11	69481335	69481432	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	3	-14.7772
chrX	42884761	42884778	LINE	L1_Mur3	L1	chrXL1_Mur342884763	NonProperStrand	11	chr10	23505152	23505279	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-14.0726
chr4	118951666	118967044	protein_coding	Ybx1	exon	ENSMUSG00000028639	ProperStrand	171	chr10	23505150	23505270	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	7	-4.3905
chr7	129303315	129304190	protein_coding	Plk1	exon	ENSMUSG00000030867	ProperStrand	146	chr4	131908689	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-0.7126
chr7	97346477	97346567	protein_coding	Picalm	intron	ENSMUSG00000039361	NonProperStrand	5	chr7	97339563	97339653	protein_coding	Picalm	intron	ENSMUSG00000039361	ProperStrand	23	1	-18.8987
chr2	90235294	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	141399351	141399367	protein_coding	Adam12	intron	ENSMUSG00000054555	NonProperStrand	49	2	-8.0285
chr2	29755361	29755466	protein_coding	Odf2	intron	ENSMUSG00000026790	ProperStrand	58	chrX	98637056	98637089	protein_coding	Nono	exon	ENSMUSG00000031311	ProperStrand	102	3	-19.8411
chr16	57391760	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr3	89070787	89070842	protein_coding	Dpm3	exon	ENSMUSG00000042737	ProperStrand	3	1	-14.1614
chr2	169059344	169059361	LTR	RMER21A	ERV1	chr2RMER21A169059326	NonProperStrand	4	chr7	29136525	29136578	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-7.7378
chr2	102290960	102290977	protein_coding	Fjx1	exon	ENSMUSG00000075012	ProperStrand	13	chr17	24857800	24857826	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-5.1456
chr6	122269451	122269537	protein_coding	Phc1	exon	ENSMUSG00000040669	ProperStrand	158	chr1	89673687	89673777	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-1.6361
chr17	13184995	13185013	protein_coding	Wtap	utr5	ENSMUSG00000060475	ProperStrand	119	chr14	33005038	33005064	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-2.7479
chr2	144087332	144087376	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	chr12	110874240	110874291	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	1	-3.3575
chr8	44380852	44381379	protein_coding	Zfp42	exon	ENSMUSG00000051176	ProperStrand	127	chr19	8963044	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-2.2178
chr11	46037591	46037632	protein_coding	Cyfip2	exon	ENSMUSG00000020340	ProperStrand	28	chr7	137777608	137777649	protein_coding	Tacc2	intron	ENSMUSG00000030852	ProperStrand	95	1	-13.9283
chrX	147107389	147107407	LINE	L1M2a	L1	chrXL1M2a147107290	ProperStrand	1	chr9	15118245	15118283	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-inf
chr8	73419649	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	chr17	24856620	24856752	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	23	-8.4052
chr14	48730543	48730559	LINE	L1M3	L1	chr14L1M348730010	ProperStrand	1	chr9	15118258	15118316	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-inf
chr12	66067197	66068028	protein_coding	Fam179b	exon	ENSMUSG00000035614	ProperStrand	21	chr16	23110909	23111002	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.9373
chr7	106627426	106627848	protein_coding	Rps3	utr3	ENSMUSG00000030744	ProperStrand	159	chr2	158205368	158205405	snoRNA	ENSMUSG00000064585_SNORA71	.	ENSMUSG00000064585	ProperStrand	418	1	-7.4803
chr1	138382212	138382230	protein_coding	Kif14	intron	ENSMUSG00000041498	NonProperStrand	36	chr15	79913288	79913321	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.5578
chr11	75569115	75578194	protein_coding	Ywhae	utr3	ENSMUSG00000020849	ProperStrand	176	chr16	23111373	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-0.9863
chr1	74573633	74574224	protein_coding	Rqcd1	exon	ENSMUSG00000026174	ProperStrand	16	chr1	120840131	120840216	protein_coding	Gli2	intron	ENSMUSG00000048402	ProperStrand	148	1	-14.1869
chr14	78913881	78913903	protein_coding	Akap11	exon	ENSMUSG00000022016	ProperStrand	44	chrX	152009278	152009294	protein_coding	Ptchd1	exon	ENSMUSG00000041552	NonProperStrand	294	1	-10.7531
chr1	141319671	141319687	protein_coding	Zbtb41	utr5	ENSMUSG00000033964	NonProperStrand	145	chr5	73448720	73448736	protein_coding	Fryl	intron	ENSMUSG00000070733	NonProperStrand	10	1	-15.1997
chr10	75322562	75322891	protein_coding	Mif	exon	ENSMUSG00000033307	ProperStrand	146	chr14	31827518	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	3	-12.1617
chr7	13516143	13516207	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr17	35299507	35299627	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	2	-1.8016
chr19	6315080	6315218	protein_coding	Cdc42bpg	exon	ENSMUSG00000024769	ProperStrand	90	chr3	32242119	32242159	protein_coding	Zmat3	intron	ENSMUSG00000027663	ProperStrand	62	1	-12.4339
chr8	4267337	4267649	protein_coding	Timm44	exon	ENSMUSG00000002949	ProperStrand	63	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	2	-12.2337
chr18	84081380	84081470	Low_complexity	CT-rich	Low_complexity	chr18CT-rich84081345	NonProperStrand	1	chr18	84081181	84081271	SINE	B4	B4	chr18B484081065	NonProperStrand	1	1	-inf
chrX	160861078	160861136	protein_coding	Piga	exon	ENSMUSG00000031381	ProperStrand	4	chr10	90581034	90581106	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-10.4109
chr2	90538026	90540306	protein_coding	Nup160	exon	ENSMUSG00000051329	ProperStrand	49	chr2	26768369	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-5.9996
chr2	121587713	121587730	protein_coding	Frmd5	intron	ENSMUSG00000027238	ProperStrand	35	chr6	71832629	71832691	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-6.6767
chr13	34436854	34436870	protein_coding	Slc22a23	utr5	ENSMUSG00000038267	ProperStrand	95	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-6.2930
chr17	26148980	26148996	protein_coding	Rab11fip3	exon	ENSMUSG00000037098	NonProperStrand	8	chr7	118219706	118219740	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-8.2090
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr19	43814438	43816337	protein_coding	Cox15	exon	ENSMUSG00000040018	ProperStrand	21	1	-10.0945
chr5	77697091	77712724	protein_coding	Rest	utr3	ENSMUSG00000029249	ProperStrand	136	chr16	23111375	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	7	-5.8382
chr7	137872667	137872710	protein_coding	Tacc2	exon	ENSMUSG00000030852	ProperStrand	95	chr2	26493389	26493473	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	7	-19.6329
chr7	31663114	31664217	protein_coding	Cd22	utr5	ENSMUSG00000030577	NonProperStrand	128	chr2	158182201	158182282	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-3.5686
chr12	4200981	4201226	protein_coding	Adcy3	exon	ENSMUSG00000020654	ProperStrand	33	chr4	57268565	57268583	protein_coding	Ptpn3	intron	ENSMUSG00000038764	ProperStrand	48	2	-19.1102
chr5	143666218	143666256	protein_coding	Actb	exon	ENSMUSG00000029580	ProperStrand	446	chr6	142211245	142214830	protein_coding	Slco1a5	exon	ENSMUSG00000063975	NonProperStrand	38	1	-10.2166
chr2	44844627	44844644	protein_coding	Zeb2	exon	ENSMUSG00000026872	ProperStrand	12	chr7	116664807	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	6	-21.6681
chr8	10634400	10634419	protein_coding	Myo16	utr3	ENSMUSG00000039057	NonProperStrand	45	chr14	76372314	76372393	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	1	-9.5691
chr6	100182291	100182381	protein_coding	Rybp	exon	ENSMUSG00000072872	ProperStrand	51	chr9	15119637	15119717	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.9150
chr2	128798709	128798736	protein_coding	Zc3h6	intron	ENSMUSG00000042851	ProperStrand	8	chr16	23110911	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-8.6552
chrX	147524330	147524400	protein_coding	Tsr2	utr3	ENSMUSG00000025264	ProperStrand	3	chr15	5068441	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-12.4037
chr9	63042015	63042031	protein_coding	Map2k5	exon	ENSMUSG00000058444	ProperStrand	193	chr1	89673741	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	2	-2.5516
chr19	6981314	6981333	protein_coding	Prdx5	utr3	ENSMUSG00000024953	ProperStrand	24	chr4	135846171	135846187	protein_coding	Zfp46	exon	ENSMUSG00000051351	NonProperStrand	85	1	-14.4704
chr13	52721827	52721843	protein_coding	Syk	intron	ENSMUSG00000021457	NonProperStrand	125	chr8	74844861	74844880	protein_coding	Klf2	utr3	ENSMUSG00000055148	ProperStrand	82	1	-11.2116
chr15	5068431	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	chr15	57978189	57978289	snoRNA	ENSMUSG00000080461_SNORA11	.	ENSMUSG00000080461	ProperStrand	171	1	-4.0470
chr2	157740443	157740459	protein_coding	Vstm2l	utr5	ENSMUSG00000037843	NonProperStrand	4	chr16	23111372	23111503	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-6.3168
chr9	57385425	57385441	protein_coding	2310046O06Rik	utr5	ENSMUSG00000032305	ProperStrand	135	chr1	72757872	72758259	protein_coding	Rpl37a	utr5	ENSMUSG00000046330	ProperStrand	94	1	-10.7830
chr2	53015763	53015857	protein_coding	Prpf40a	exon	ENSMUSG00000061136	ProperStrand	129	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-2.3025
chr4	133742939	133742956	protein_coding	Ccdc21	utr5	ENSMUSG00000037443	ProperStrand	112	chr7	16534823	16534839	protein_coding	Ehd2	utr3	ENSMUSG00000074364	NonProperStrand	197	1	-9.6760
chr1	13136982	13138434	protein_coding	Ncoa2	exon	ENSMUSG00000005886	ProperStrand	26	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-6.8655
chr2	93302394	93302411	lincRNA	Gm10804	intron	ENSMUSG00000075025	ProperStrand	2	chr17	35033638	35033733	protein_coding	Zbtb12	utr3	ENSMUSG00000049823	ProperStrand	6	1	-inf
chr7	142889623	142889639	protein_coding	Mki67	exon	ENSMUSG00000031004	ProperStrand	286	chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	1	-8.3099
chr11	94833917	94834725	protein_coding	Sgca	exon	ENSMUSG00000001508	ProperStrand	1	chr11	48616658	48616706	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	1	-inf
chr5	74489204	74489294	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr2	120837185	120837214	protein_coding	Ccndbp1	exon	ENSMUSG00000023572	ProperStrand	3	1	-11.9468
chr1	178722373	178722453	protein_coding	Cep170	intron	ENSMUSG00000057335	ProperStrand	21	chr14	96988089	96988179	snoRNA	ENSMUSG00000064581_SNORA30	.	ENSMUSG00000064581	ProperStrand	146	1	-13.6580
chr9	94437767	94437783	protein_coding	1190002N15Rik	exon	ENSMUSG00000045414	NonProperStrand	11	chr1	102076759	102076794	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	1	-12.8988
chr15	80085899	80085915	protein_coding	Atf4	utr5	ENSMUSG00000042406	ProperStrand	6	chr7	116664821	116664853	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-7.0474
chr9	59518360	59518460	protein_coding	Pkm2	exon	ENSMUSG00000032294	NonProperStrand	18	chr18	35714217	35714290	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	NonProperStrand	47	2	-inf
chr1	150683388	150683409	LINE	Lx9	L1	chr1Lx9150683334	ProperStrand	2	chr9	15119648	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-inf
chr9	106741448	106746502	protein_coding	Vprbp	exon	ENSMUSG00000040325	ProperStrand	35	chr17	33273890	33273906	protein_coding	Morc2b	exon	ENSMUSG00000048602	NonProperStrand	14	1	-17.4122
chr13	59726893	59726942	protein_coding	Naa35	exon	ENSMUSG00000021555	ProperStrand	20	chr7	52381762	52381789	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-9.7914
chr11	78155243	78155259	protein_coding	Pigs	exon	ENSMUSG00000041958	ProperStrand	31	chr5	115939500	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-9.1930
chr17	92396816	92396906	LINE	L1Md_F2	L1	chr17L1Md_F292396253	ProperStrand	1	chr7	54442448	54442538	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-inf
chr17	24857628	24858628	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr16	23111374	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	10	-2.6920
chr13	54662141	54662266	protein_coding	4833439L19Rik	intron	ENSMUSG00000025871	ProperStrand	14	chr9	15119729	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.3767
chr7	148634702	148634792	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	chr9	40612876	40612921	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	3	-3.0072
chr8	88072474	88072492	protein_coding	Dnaja2	exon	ENSMUSG00000031701	ProperStrand	39	chr6	119057630	119057647	protein_coding	Cacna1c	intron	ENSMUSG00000051331	ProperStrand	46	1	-14.7215
chr9	20696035	20696135	protein_coding	Ppan	exon	ENSMUSG00000004100	ProperStrand	65	chr17	35087916	35087962	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-5.0448
chr7	31792357	31792427	LTR	MLT1K	MaLR	chr7MLT1K31792305	ProperStrand	1	chr15	79913310	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-inf
chr1	44067515	44067595	protein_coding-noncoding	A530098C11Rik	utr3	ENSMUSG00000047343	ProperStrand	1	chr1	44067324	44067414	protein_coding	A530098C11Rik	intron	ENSMUSG00000047343	ProperStrand	1	1	-inf
chr17	12360492	12360582	protein_coding	Agpat4	intron	ENSMUSG00000023827	ProperStrand	15	chr7	116663635	116663715	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-5.1056
chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	chr17	39985433	39985450	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-1.3087
chr9	107673007	107673024	protein_coding	Rbm5	intron	ENSMUSG00000032580	NonProperStrand	38	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.5179
chr14	31827477	31827512	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	chr17	71990218	71990265	snoRNA	ENSMUSG00000092887_Snord53	.	ENSMUSG00000092887	ProperStrand	53	1	-7.1916
chr17	6232006	6232022	protein_coding	Tulp4	exon	ENSMUSG00000034377	NonProperStrand	265	chr14	122863713	122863729	protein_coding	Zic5	exon	ENSMUSG00000041703	ProperStrand	7	1	-14.7694
chr11	68886928	68887056	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	chr11	116938556	116938742	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	10	-2.3772
chr2	26445980	26447208	protein_coding	Egfl7	exon	ENSMUSG00000026921	ProperStrand	44	chr7	116663633	116663767	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	4	-10.5868
chr3	130818452	130887648	protein_coding	Lef1	exon	ENSMUSG00000027985	ProperStrand	9	chr7	133938797	133938855	protein_coding	Aldoa	utr3	ENSMUSG00000030695	ProperStrand	721	1	-12.2229
chr7	29171540	29171558	protein_coding	Med29	utr3	ENSMUSG00000003444	NonProperStrand	134	chr7	117166721	117166812	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	7	-19.1772
chr18	89387605	89387621	protein_coding	Cd226	intron	ENSMUSG00000034028	ProperStrand	47	chr7	112630313	112630330	protein_coding	Prkcdbp	exon	ENSMUSG00000037060	ProperStrand	8	1	-18.0973
chr6	122679594	122685454	protein_coding	Slc2a3	utr3	ENSMUSG00000003153	ProperStrand	682	chr2	32818803	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	2	-2.3403
chr7	3298451	3298482	protein_coding	Myadm	utr3	ENSMUSG00000068566	ProperStrand	31	chr17	24857717	24857807	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	7	-19.1384
chr10	94151578	94151595	protein_coding	Ccdc41	utr5	ENSMUSG00000020024	NonProperStrand	34	chr5	135529965	135529988	snoRNA	ENSMUSG00000088008_SCARNA20	.	ENSMUSG00000088008	ProperStrand	139	1	-12.7713
chr14	68295460	68295506	protein_coding	Cdca2	exon	ENSMUSG00000048922	ProperStrand	50	chr11	97642952	97642968	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.7879
chr17	86508593	86508610	protein_coding	Srbd1	exon	ENSMUSG00000024135	NonProperStrand	12	chr5	116009795	116009869	protein_coding	Rplp0	utr5	ENSMUSG00000067274	ProperStrand	291	1	-13.4341
chr2	131005220	131005236	protein_coding	Cenpb	exon	ENSMUSG00000068267	NonProperStrand	38	chr7	52382014	52382040	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-7.6230
chr11	120009091	120012322	protein_coding	Slc38a10	exon	ENSMUSG00000061306	ProperStrand	91	chr19	8800362	8800442	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-4.8410
chr1	37529442	37529459	protein_coding	Mgat4a	intron	ENSMUSG00000026110	ProperStrand	16	chr4	79650471	79650509	pseudogene	Gm11410	.	ENSMUSG00000083219	ProperStrand	47	1	-16.5408
chr10	90432659	90432678	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	chr8	26879777	26879793	protein_coding	Gm17484	utr3	ENSMUSG00000091514	ProperStrand	68	1	-10.3670
chr6	126743580	126743598	SINE	MIRb	MIR	chr6MIRb126743454	ProperStrand	18	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-11.8112
chr10	4541186	4544012	protein_coding	Fbxo5	utr5	ENSMUSG00000019773	ProperStrand	12	chr18	35102297	35102341	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-9.8504
chr7	125865758	125865812	protein_coding	6330503K22Rik	exon	ENSMUSG00000033904	ProperStrand	25	chr16	23111389	23111489	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.6475
chr16	91412186	91412257	protein_coding	Il10rb	exon	ENSMUSG00000022969	ProperStrand	19	chr9	15119731	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.7702
chr17	30772308	30772324	protein_coding	Dnahc8	utr5	ENSMUSG00000033826	ProperStrand	246	chr12	110887827	110887863	snoRNA	ENSMUSG00000084549_SNORD113	.	ENSMUSG00000084549	ProperStrand	196	1	-8.1165
chr11	4691167	4694452	protein_coding	Nf2	exon	ENSMUSG00000009073	ProperStrand	72	chr1	162967522	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-5.4063
chr5	20500255	20500321	protein_coding	Ptpn12	intron	ENSMUSG00000028771	ProperStrand	24	chr14	33005134	33005224	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-5.7700
chr9	45214186	45214202	protein_coding	Fxyd2	utr5	ENSMUSG00000059412	NonProperStrand	5	chr4	131908689	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.7672
chr1	93252080	93252096	protein_coding	Klhl30	exon	ENSMUSG00000026308	ProperStrand	27	chr3	88715214	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-8.8379
chr12	66166759	66170045	protein_coding	Fkbp3	exon	ENSMUSG00000020949	ProperStrand	8	chr16	23110942	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.2180
chr2	90235292	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	41644311	41644329	protein_coding	Armc2	exon	ENSMUSG00000071324	ProperStrand	281	3	-4.9112
chr11	8416060	8416079	protein_coding	Tns3	intron	ENSMUSG00000020422	NonProperStrand	24	chr7	51505506	51505572	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	1	-10.6315
chrX	116065387	116065477	LINE	L1VL4	L1	chrXL1VL4116065120	ProperStrand	1	chr7	54443159	54443239	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	1	-inf
chr8	49098473	49098491	LTR	MLT1B	MaLR	chr8MLT1B49098393	ProperStrand	2	chr8	114535795	114535846	protein_coding	Terf2ip	exon	ENSMUSG00000033430	ProperStrand	4	1	-inf
chr5	147646719	147646849	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	chr18	35714156	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	4	-0.9598
chr1	8668045	8669156	protein_coding	Sntg1	exon	ENSMUSG00000025909	NonProperStrand	11	chr16	11144176	11144276	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	1	-13.9256
chr7	137872639	137872730	protein_coding	Tacc2	exon	ENSMUSG00000030852	ProperStrand	95	chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-5.5512
chr7	25782397	25782413	protein_coding	Atp1a3	exon	ENSMUSG00000040907	NonProperStrand	4	chr6	125051348	125051516	protein_coding	Chd4	exon	ENSMUSG00000063870	ProperStrand	303	1	-15.7379
chr6	122663159	122663224	protein_coding	Nanog	exon	ENSMUSG00000012396	ProperStrand	66	chr2	26768395	26768437	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-5.4153
chr8	44380831	44380907	protein_coding	Zfp42	utr3	ENSMUSG00000051176	ProperStrand	127	chr17	35088957	35089005	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	3	-10.5708
chr2	90235322	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	39544944	39544960	protein_coding	Rev3l	exon	ENSMUSG00000019841	NonProperStrand	4	1	-10.0500
chr3	88368929	88368982	protein_coding	Ubqln4	exon	ENSMUSG00000008604	ProperStrand	49	chr1	177622593	177622613	protein_coding	Opn3	exon	ENSMUSG00000026525	ProperStrand	31	1	-15.0524
chr12	106779606	106779626	LTR	RMER17A	ERVK	chr12RMER17A106778950	NonProperStrand	1	chr4	131908356	131908465	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	1	-inf
chr12	110168093	110168111	protein_coding	Wdr25	intron	ENSMUSG00000040877	ProperStrand	14	chr13	76341035	76341055	protein_coding	Fam81b	intron	ENSMUSG00000078966	NonProperStrand	220	1	-13.6733
chr2	25920077	25920093	protein_coding	Nacc2	exon	ENSMUSG00000026932	NonProperStrand	15	chr2	180397708	180397734	protein_coding	Dido1	intron	ENSMUSG00000038914	ProperStrand	81	1	-15.5399
chr14	63287574	63287615	protein_coding	Serpine3	intron	ENSMUSG00000091155	ProperStrand	210	chr4	131908259	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	29	-inf
chr9	110141526	110141566	protein_coding	Smarcc1	utr3	ENSMUSG00000032481	ProperStrand	108	chr9	120038556	120038672	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.0346
chr1	102688653	102688743	LINE	L1_Mus1	L1	chr1L1_Mus1102688221	NonProperStrand	1	chr1	12657966	12658056	lincRNA	Gm17644	exon	ENSMUSG00000066918	ProperStrand	10	1	-inf
chr4	149026816	149026832	protein_coding	Pik3cd	exon	ENSMUSG00000039936	ProperStrand	151	chr2	26494791	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.5739
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr4	94625671	94627024	protein_coding	Mysm1	exon	ENSMUSG00000062627	ProperStrand	20	1	-10.8158
chr2	162909898	162909921	protein_coding	Mybl2	utr3	ENSMUSG00000017861	ProperStrand	230	chr16	23110456	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	4	-3.2092
chr4	147385125	147385141	protein_coding	Clcn6	exon	ENSMUSG00000029016	ProperStrand	120	chr4	121870887	122132506	pseudogene	Gm12896	.	ENSMUSG00000083558	NonProperStrand	19	1	-14.2597
chr17	35974967	35975015	protein_coding	Tubb5	utr5	ENSMUSG00000001525	ProperStrand	624	chr14	70787670	70787687	protein_coding	Piwil2	intron	ENSMUSG00000033644	ProperStrand	36	1	-9.6557
chr16	23110828	23110962	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	chr13	22107658	22107675	tRNA	tRNA974-ValAAC	.	553649	ProperStrand	28	1	-1.1386
chr8	129468746	129468836	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	NonProperStrand	22	chr16	23110917	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	NonProperStrand	93	2	-21.1696
chrX	42884761	42884778	LINE	L1_Mur3	L1	chrXL1_Mur342884763	NonProperStrand	11	chr14	76247783	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-12.2078
chr2	178037652	178037674	protein_coding	Phactr3	intron	ENSMUSG00000027525	NonProperStrand	5	chr4	131865877	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-6.5022
chr1	167106330	167106379	protein_coding	Sft2d2	utr3	ENSMUSG00000040848	ProperStrand	25	chr11	97642984	97643074	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.0636
chr8	11626201	11626301	protein_coding	Ankrd10	intron	ENSMUSG00000031508	ProperStrand	32	chr17	13112506	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-5.8052
chr18	33706828	33706908	LTR	MLT1A	MaLR	chr18MLT1A33706809	NonProperStrand	1	chr18	33706981	33707071	LTR	MLT1A	MaLR	chr18MLT1A33706959	NonProperStrand	1	1	-inf
chr2	26493364	26493506	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr17	35088957	35089024	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	12	-1.5847
chr4	129200279	129200325	protein_coding	Hdac1	exon	ENSMUSG00000028800	ProperStrand	49	chr19	46079316	46079332	protein_coding	Hps6	exon	ENSMUSG00000074811	ProperStrand	56	1	-13.8643
chr5	111082517	111082592	protein_coding	Ddx51	exon	ENSMUSG00000029504	ProperStrand	54	chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-6.0498
chr2	26283775	26283865	protein_coding	Sec16a	exon	ENSMUSG00000026924	ProperStrand	86	chr17	24857720	24857800	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.7184
chr11	51858673	51858690	protein_coding	Cdkl3	intron	ENSMUSG00000020389	ProperStrand	14	chr7	52715022	52715104	protein_coding	Ftl1	utr5	ENSMUSG00000050708	ProperStrand	807	2	-17.4897
chr5	24203204	24204505	protein_coding	Nub1	exon	ENSMUSG00000028954	ProperStrand	32	chr4	131908687	131908771	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	6	-13.4845
chr17	28338292	28338363	protein_coding	Zfp523	exon	ENSMUSG00000024220	ProperStrand	26	chr16	64763243	64763266	protein_coding	4930453N24Rik	utr3	ENSMUSG00000059920	ProperStrand	39	8	-19.1361
chr10	75322815	75322901	protein_coding	Mif	exon	ENSMUSG00000033307	ProperStrand	146	chr4	131908689	131908853	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-2.0796
chr7	5504013	5504103	LINE	L1Md_T	L1	chr7L1Md_T5501169	ProperStrand	1	chr19	8800355	8800434	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-inf
chr17	4082616	4082706	LINE	L1Md_A	L1	chr17L1Md_A4082095	NonProperStrand	28	chr12	13580402	13580482	protein_coding	Nbas	intron	ENSMUSG00000020576	ProperStrand	35	1	-15.9356
mmu-miR-6239	1	18	miRNA	mmu-miR-6239	.	mmu-miR-6239	ProperStrand	31	chr9	118952888	118952977	protein_coding	Ctdspl	utr3	ENSMUSG00000047409	ProperStrand	8	1	-18.4057
chr5	65653870	65653900	protein_coding	Rfc1	utr3	ENSMUSG00000029191	ProperStrand	53	chr3	153574609	153574654	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	1	-9.9239
chr15	81560306	81560322	protein_coding	Rangap1	utr5	ENSMUSG00000022391	NonProperStrand	35	chr5	108333619	108333666	snoRNA	ENSMUSG00000064453_Snord21	.	ENSMUSG00000064453	ProperStrand	201	1	-11.9773
chr16	18240457	18240507	protein_coding	Ranbp1	intron	ENSMUSG00000005732	ProperStrand	22	chr12	92452176	92472502	protein_coding	4930534B04Rik	exon	ENSMUSG00000061533	ProperStrand	14	1	-18.5274
chr15	68012619	68012635	protein_coding	Zfat	exon	ENSMUSG00000022335	NonProperStrand	25	chr6	52165758	52165774	protein_coding	Hoxa7	exon	ENSMUSG00000038236	ProperStrand	28	1	-16.5905
chr5	73563222	73563238	protein_coding	Fryl	intron	ENSMUSG00000070733	ProperStrand	173	chr19	8799581	8799615	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-4.6989
chr1	88252836	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	chr7	52381771	52381799	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-1.4374
chr12	114426663	114426691	protein_coding	Tmem121	exon	ENSMUSG00000049036	ProperStrand	5	chr5	121655018	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-14.3187
chr2	90235313	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr14	31826494	31826510	protein_coding	Gnl3	exon	ENSMUSG00000042354	NonProperStrand	59	2	-7.4807
chr8	45259540	45259620	LINE	L1_Mus3	L1	chr8L1_Mus345258093	ProperStrand	1	chr8	33044415	33044504	protein_coding	Nrg1	intron	ENSMUSG00000062991	NonProperStrand	6	1	-inf
chrX	147481731	147481821	protein_coding	Fgd1	utr5	ENSMUSG00000025265	ProperStrand	96	chr5	130300465	130300545	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.7427
chr9	15119631	15119970	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	chr8	32260334	32260425	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	37	-1.0790
chr6	39118992	39119069	protein_coding	Jhdm1d	exon	ENSMUSG00000042599	ProperStrand	14	chr10	23505163	23505253	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.6795
chr7	13516163	13516204	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr1	138122170	138122187	protein_coding	5730559C18Rik	intron	ENSMUSG00000041605	NonProperStrand	22	1	-10.6948
chr6	124761950	124762428	protein_coding	Tpi1	exon	ENSMUSG00000023456	ProperStrand	94	chr5	130300445	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-5.0091
chrX	91819447	91819527	LINE	L1Md_A	L1	chrXL1Md_A91819312	ProperStrand	1	chrX	91819033	91819123	LINE	Lx2A1	L1	chrXLx2A191818485	ProperStrand	1	1	-inf
chr11	69870769	69870785	protein_coding	Asgr1	exon	ENSMUSG00000020884	NonProperStrand	145	chr2	22445082	22445114	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-6.0295
chr4	154347249	154347270	protein_coding	Pank4	intron	ENSMUSG00000029056	ProperStrand	15	chr10	23505152	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.5481
chr3	98023350	98023367	LINE	Lx9	L1	chr3Lx998023319	ProperStrand	23	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.0081
chr16	5256015	5256031	protein_coding	Fam86	utr5	ENSMUSG00000022544	ProperStrand	231	chr4	141259076	141259120	protein_coding	Ddi2	exon	ENSMUSG00000078515	ProperStrand	79	1	-10.0574
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr7	26181911	26202421	protein_coding	Lipe	intron	ENSMUSG00000003123	NonProperStrand	63	1	-7.6978
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr1	131461363	131461383	protein_coding	Thsd7b	intron	ENSMUSG00000042581	ProperStrand	13	1	-8.9859
chr15	103023473	103023556	protein_coding	Cbx5	utr3	ENSMUSG00000009575	ProperStrand	98	chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-6.8851
chr6	129483194	129483250	lincRNA	1700101I11Rik	intron	ENSMUSG00000091870	NonProperStrand	1	chr12	111808915	111808945	protein_coding	Ppp2r5c	utr3	ENSMUSG00000017843	ProperStrand	36	1	-inf
chr13	118038556	118053254	protein_coding	Emb	exon	ENSMUSG00000021728	ProperStrand	13	chr8	98270005	98270085	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-8.6157
chr6	92128705	92128736	protein_coding	Mrps25	exon	ENSMUSG00000014551	ProperStrand	5	chrX	98755260	98757489	protein_coding	Taf1	exon	ENSMUSG00000031314	ProperStrand	61	1	-18.0943
chr4	133088529	133088609	protein_coding	Nudc	utr3	ENSMUSG00000028851	ProperStrand	80	chr7	26405471	26405992	protein_coding	Atp5sl	exon	ENSMUSG00000057229	ProperStrand	9	1	-16.5926
chr2	120217953	120218058	protein_coding	Tmem87a	exon	ENSMUSG00000033808	ProperStrand	5	chr1	182365195	182365212	protein_coding	6330403A02Rik	utr3	ENSMUSG00000053963	NonProperStrand	3	1	-inf
chrX	118145646	118145736	LINE	L1Md_F2	L1	chrXL1Md_F2118145242	NonProperStrand	1	chrX	118145896	118145986	LINE	L1Md_F2	L1	chrXL1Md_F2118145827	ProperStrand	1	1	-inf
chr13	63612936	63612952	protein_coding	Ptch1	exon	ENSMUSG00000021466	NonProperStrand	118	chr8	72338488	72339346	protein_coding	Gmip	exon	ENSMUSG00000036246	ProperStrand	102	1	-10.8888
chr11	22735762	22882243	protein_coding	Commd1	exon	ENSMUSG00000051355	ProperStrand	36	chr15	34370544	34370627	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-7.5249
chr4	41067395	41067633	protein_coding	Nol6	exon	ENSMUSG00000028430	ProperStrand	98	chr7	117189960	117190040	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.4658
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr14	31827477	31827543	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-2.5021
mmu-miR-291a-3p	0	22	miRNA	mmu-miR-291a-3p	.	mmu-miR-291a-3p	ProperStrand	19	chr3	32237991	32238053	protein_coding	Zmat3	utr3	ENSMUSG00000027663	ProperStrand	62	1	-15.5995
chrX	20248843	20248913	protein_coding	Uba1	exon	ENSMUSG00000001924	ProperStrand	156	chr10	127428422	127428438	protein_coding	Hsd17b6	exon	ENSMUSG00000025396	NonProperStrand	68	1	-11.1437
chr6	39363658	39363696	protein_coding	Mkrn1	intron	ENSMUSG00000029922	ProperStrand	177	chr7	51505224	51505286	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	1	-6.0083
chr4	58083061	58083077	protein_coding	Svep1	exon	ENSMUSG00000028369	ProperStrand	54	chr4	131865855	131865981	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	5	-9.7835
chr14	22488867	22488910	protein_coding	Myst4	exon	ENSMUSG00000021767	ProperStrand	151	chr2	114022794	114022812	protein_coding	Zfp770	exon	ENSMUSG00000040321	NonProperStrand	1	1	-inf
chr7	53089954	53089976	protein_coding	Grin2d	intron	ENSMUSG00000002771	NonProperStrand	31	chrX	93136011	93136027	protein_coding	Las1l	exon	ENSMUSG00000057421	ProperStrand	248	1	-11.8020
chr5	37487648	37487666	protein_coding	Jakmip1	intron	ENSMUSG00000063646	NonProperStrand	7	chr4	131908689	131908785	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.0493
chr15	82730076	82730107	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	chr7	118219663	118219740	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	3	-1.8681
chr7	30246836	30246856	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	chr11	62416606	62416645	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-1.2762
chr5	34345563	34345581	protein_coding	Nat8l	utr3	ENSMUSG00000048142	NonProperStrand	7	chr9	64022854	64022928	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	3	-19.5716
chr18	77584220	77584237	protein_coding	Loxhd1	intron	ENSMUSG00000032818	NonProperStrand	5	chr11	62416951	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-11.1760
chr3	142459900	142459990	protein_coding	Pkn2	intron	ENSMUSG00000004591	NonProperStrand	3	chr1	153291700	153291790	protein_coding	1190005F20Rik	intron	ENSMUSG00000053286	ProperStrand	5	1	-inf
chrX	84483703	84483727	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr4	106584238	106584254	protein_coding	Ssbp3	utr5	ENSMUSG00000061887	ProperStrand	36	1	-9.2758
chr8	103289497	103289516	Simple_repeat	(CA)n	Simple_repeat	chr8(CA)n103289418	ProperStrand	10	chr10	110918582	110918672	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-6.9682
chr11	30000611	30000655	protein_coding	Spnb2	exon	ENSMUSG00000020315	ProperStrand	103	chr6	121423179	121423195	protein_coding	Iqsec3	utr5	ENSMUSG00000040797	NonProperStrand	139	1	-10.5412
chr4	32782468	32783215	protein_coding	Mdn1	exon	ENSMUSG00000058006	ProperStrand	184	chr11	69481397	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	14	-inf
chr3	33712110	33713115	protein_coding	Ccdc39	exon	ENSMUSG00000027676	ProperStrand	106	chr5	143775647	143775671	protein_coding	Rnf216	intron	ENSMUSG00000045078	ProperStrand	38	1	-13.0935
chr5	144937018	144946786	protein_coding	Lmtk2	utr3	ENSMUSG00000038970	ProperStrand	60	chr16	23110896	23111002	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-0.7998
chr5	138263668	138263685	protein_coding	Zcwpw1	exon	ENSMUSG00000037108	ProperStrand	5	chr11	97642952	97643057	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-12.1765
chr11	83085135	83085201	snRNA	ENSMUSG00000064856_U2	.	ENSMUSG00000064856	ProperStrand	34	chr14	33005036	33005093	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-5.0835
chr10	75399178	75400058	protein_coding	Chchd10	exon	ENSMUSG00000049422	ProperStrand	140	chr17	24857732	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.0333
chr5	74489201	74489263	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr8	11441964	11441980	protein_coding	Col4a2	exon	ENSMUSG00000031503	ProperStrand	74	1	-5.2128
chr2	130100377	130101436	protein_coding	Nop56	exon	ENSMUSG00000027405	ProperStrand	125	chr11	97642952	97643019	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-2.5174
chr7	28154322	28154339	protein_coding	Spnb4	exon	ENSMUSG00000011751	ProperStrand	39	chr9	64022855	64022923	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-8.8900
chr4	19567556	19568954	protein_coding	Wwp1	exon	ENSMUSG00000041058	ProperStrand	5	chr9	15118284	15118374	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-8.4764
chr11	115940871	115941034	protein_coding	Wbp2	exon	ENSMUSG00000034341	ProperStrand	39	chr1	92698923	92698940	protein_coding	Col6a3	exon	ENSMUSG00000048126	NonProperStrand	44	1	-14.8140
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr15	84101747	84103941	protein_coding	Parvb	exon	ENSMUSG00000022438	ProperStrand	127	1	-7.2208
chr1	162966841	162966878	non_coding	Gas5	.	ENSMUSG00000053332	ProperStrand	144	chr4	116276553	116276604	protein_coding	Nasp	exon	ENSMUSG00000028693	ProperStrand	64	2	-17.7852
chr1	172079405	172079495	protein_coding	Uap1	exon	ENSMUSG00000026670	ProperStrand	18	chr15	71624775	71624798	snoRNA	ENSMUSG00000088895_SNORA81	.	ENSMUSG00000088895	ProperStrand	348	1	-12.2339
chr5	100855922	100855974	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr10	90582424	90584671	protein_coding	Slc25a3	exon	ENSMUSG00000061904	ProperStrand	74	1	-6.2233
chr9	58778868	58778912	protein_coding	Neo1	exon	ENSMUSG00000032340	ProperStrand	35	chr11	69483136	69483212	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.4080
chr6	127914245	127914269	protein_coding	Tspan9	utr3	ENSMUSG00000030352	ProperStrand	67	chr4	122970472	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-7.1950
chr8	13478321	13479053	protein_coding	Gas6	exon	ENSMUSG00000031451	ProperStrand	27	chr1	162967515	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.9934
chr7	134337019	134337064	protein_coding	Cd2bp2	utr3	ENSMUSG00000042502	ProperStrand	73	chr9	15118247	15118321	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.1102
chr7	29101812	29101892	protein_coding	Supt5h	exon	ENSMUSG00000003435	ProperStrand	123	chr4	131865894	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	6	-6.9958
chr1	189823707	189823724	protein_coding	Esrrg	intron	ENSMUSG00000026610	ProperStrand	24	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.9246
chr2	70927899	70927915	protein_coding	Dcaf17	exon	ENSMUSG00000041966	NonProperStrand	89	chr2	65173792	65173808	protein_coding	Slc38a11	exon	ENSMUSG00000061171	ProperStrand	1	1	-inf
chr13	38592190	38592224	protein_coding	Txndc5	utr3	ENSMUSG00000038991	ProperStrand	48	chr4	122970392	122970469	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-7.8606
chr2	25794325	25794375	protein_coding	Camsap1	exon	ENSMUSG00000026933	ProperStrand	27	chr7	52381972	52381996	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-8.3114
chr11	68917876	68918173	protein_coding	Per1	exon	ENSMUSG00000020893	ProperStrand	46	chr9	120039614	120039680	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.8097
chr3	104627963	104628016	protein_coding	Capza1	exon	ENSMUSG00000070372	ProperStrand	42	chr1	88252838	88252879	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	5	-19.7191
chr19	60848038	60848070	protein_coding	Eif3a	exon	ENSMUSG00000024991	ProperStrand	287	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-3.9492
chr2	72244619	72244656	protein_coding	B230120H23Rik	utr3	ENSMUSG00000004085	ProperStrand	34	chr6	71832604	71832689	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	2	-10.8869
chr1	74410963	74411124	protein_coding	Gm216	exon	ENSMUSG00000073650	ProperStrand	33	chr11	106362640	106362660	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-8.6034
chr10	79717634	79717676	protein_coding	Ndufs7	exon	ENSMUSG00000020153	ProperStrand	15	chr10	110918664	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-10.0469
chr13	23856165	23856225	protein_coding	Hist1h1a	exon	ENSMUSG00000049539	ProperStrand	34	chr5	74489567	74489657	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	2	-8.0556
chr13	107737212	107737228	protein_coding	Dimt1	utr5	ENSMUSG00000021692	ProperStrand	185	chr6	125134534	125134562	protein_coding	Ncapd2	exon	ENSMUSG00000038252	ProperStrand	170	1	-8.9676
chr13	54180908	54180933	protein_coding	Sfxn1	exon	ENSMUSG00000021474	ProperStrand	18	chr1	162965981	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-5.9338
chr8	87223594	87223610	protein_coding	Trmt1	exon	ENSMUSG00000001909	NonProperStrand	60	chr10	110918600	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	3	-8.6103
chr2	116359450	116359467	LINE	L1Md_F	L1	chr2L1Md_F116358866	NonProperStrand	1	chr12	17552949	17553055	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-inf
chr16	74119320	74119337	protein_coding	Robo2	intron	ENSMUSG00000052516	NonProperStrand	28	chr15	34370545	34370585	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-5.0008
chr6	148869712	148871266	protein_coding	Fam60a	utr3	ENSMUSG00000039985	ProperStrand	68	chr11	6428074	6428164	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-5.1368
chr10	88215673	88215689	protein_coding	Utp20	exon	ENSMUSG00000004356	ProperStrand	45	chr4	131908236	131908357	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-3.3962
chr1	33828651	33828669	protein_coding	Zfp451	intron	ENSMUSG00000042197	NonProperStrand	393	chr11	55296195	55296272	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-2.6469
chr1	52261258	52261348	protein_coding-noncoding	Gls	utr3	ENSMUSG00000026103	ProperStrand	1	chr1	52261290	52261370	protein_coding	Gls	intron	ENSMUSG00000026103	ProperStrand	56	1	-inf
chr9	58821390	58821443	protein_coding	Neo1	intron	ENSMUSG00000032340	NonProperStrand	9	chr15	5068435	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-9.9225
chr6	25638699	25638715	protein_coding	Gpr37	exon	ENSMUSG00000039904	ProperStrand	49	chr4	138979878	138980729	protein_coding	Ubr4	exon	ENSMUSG00000066036	ProperStrand	304	1	-10.4691
chr7	97128955	97129029	protein_coding	Eed	exon	ENSMUSG00000030619	ProperStrand	13	chr1	172975116	172975189	tRNA	tRNA699-GlyGCC	.	119269	ProperStrand	660	1	-11.6282
chr18	60988734	60991195	protein_coding	Tcof1	exon	ENSMUSG00000024613	ProperStrand	68	chr12	112779247	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-4.5356
chr2	52256126	52256168	protein_coding	Arl5a	utr3	ENSMUSG00000036093	ProperStrand	15	chr3	123210878	123210979	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-4.5915
chr9	26440743	26440759	DNA	MER5A	MER1_type	chr9MER5A26440741	ProperStrand	108	chr9	40610149	40610203	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	1	-6.9689
chr8	30460373	30460390	LINE	L1MA7	L1	chr8L1MA730460133	NonProperStrand	7	chr9	120038491	120038546	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-7.2707
chr19	59064715	59064732	protein_coding	4930506M07Rik	exon	ENSMUSG00000041362	ProperStrand	36	chr7	117166765	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-5.8136
chr9	59516394	59527086	protein_coding	Pkm2	utr3	ENSMUSG00000032294	ProperStrand	1296	chr18	35714144	35714262	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	7	-1.3528
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr10	59762723	59762910	protein_coding	Psap	exon	ENSMUSG00000004207	ProperStrand	124	1	-4.9509
chr7	54441770	54442637	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	chr7	110699216	110699388	protein_coding	Olfr613	utr5	ENSMUSG00000078624	ProperStrand	16	5	-19.5452
chr12	11250037	11250061	protein_coding	Gen1	exon	ENSMUSG00000051235	ProperStrand	12	chr5	108334194	108334230	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-8.0381
chr11	72262452	72262577	protein_coding	Mybbp1a	exon	ENSMUSG00000040463	ProperStrand	279	chr18	35714167	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	4	-4.5727
chr19	5136910	5138936	protein_coding	Pacs1	exon	ENSMUSG00000024855	ProperStrand	24	chr9	15119323	15119397	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	3	-15.7726
chr7	25763333	25763423	protein_coding	Atp1a3	utr3	ENSMUSG00000040907	ProperStrand	66	chr14	52829477	52829557	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-8.0116
chr1	196922944	196922967	LTR	ORR1A3	MaLR	chr1ORR1A3196922715	ProperStrand	1	chr16	23111777	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-inf
chr17	25410659	25410675	protein_coding	Ube2i	utr5	ENSMUSG00000015120	NonProperStrand	10	chr14	15572351	15572370	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	1	-14.9531
chr9	31737933	31737951	LTR	RMER15	ERVL	chr9RMER1531737768	NonProperStrand	2	chr4	58888420	58889981	protein_coding	AI314180	exon	ENSMUSG00000050812	ProperStrand	19	2	-inf
chr16	94628850	94628930	protein_coding	Ttc3	intron	ENSMUSG00000040785	ProperStrand	47	chr11	69483138	69483228	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	15	-inf
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr7	16524110	16524179	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	2	-4.4715
chr9	115151770	115151810	protein_coding	Stt3b	utr3	ENSMUSG00000032437	ProperStrand	66	chr1	180261364	180261532	protein_coding	Hnrnpu	exon	ENSMUSG00000039630	ProperStrand	286	3	-inf
chr15	81725774	81725836	protein_coding	Aco2	exon	ENSMUSG00000022477	ProperStrand	237	chr7	29136544	29136634	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	4	-2.9043
chr2	158182196	158182291	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	chr13	21261553	21261573	tRNA	tRNA999-MetCAT	.	546161	ProperStrand	63	4	-15.3532
chr7	116664869	116664922	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	chrX	143918873	143918963	snoRNA	ENSMUSG00000084421_SNORA35	.	ENSMUSG00000084421	ProperStrand	293	6	-4.8073
chr8	87525135	87525238	protein_coding	Hook2	exon	ENSMUSG00000052566	ProperStrand	204	chr11	6428108	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.2147
chr7	150755776	150755949	protein_coding	Cars	exon	ENSMUSG00000010755	ProperStrand	62	chr11	97642979	97643059	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-4.2792
chr2	90235304	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	67005924	67005940	protein_coding	Myh2	exon	ENSMUSG00000033196	ProperStrand	66	1	-4.2811
chrX	7182489	7182506	protein_coding	Ccdc22	utr5	ENSMUSG00000031143	NonProperStrand	51	chr19	8963087	8963184	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.5507
chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	chr11	68887037	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-1.2188
chr2	26493464	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chrX	20235483	20235499	protein_coding	Uba1	utr5	ENSMUSG00000001924	ProperStrand	156	1	-4.3427
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr17	24856621	24856719	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-2.3309
chr8	120245844	120245860	protein_coding	Hsd17b2	intron	ENSMUSG00000031844	ProperStrand	2	chr5	90682237	90682341	protein_coding	Ankrd17	intron	ENSMUSG00000055204	ProperStrand	77	1	-21.0330
chr11	95431981	95432081	protein_coding	Ngfr	utr3	ENSMUSG00000000120	ProperStrand	31	chr10	23505154	23505202	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.2459
chr2	26493360	26493465	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr1	9932548	9932626	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	6	-2.3303
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr3	145142817	145142833	protein_coding	Col24a1	exon	ENSMUSG00000028197	ProperStrand	33	1	-5.6244
chr19	4451017	4451035	protein_coding	Syt12	exon	ENSMUSG00000049303	NonProperStrand	2	chr13	96100553	96100690	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	NonProperStrand	8	2	-inf
mmu-miR-6238	2	19	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr3	95980321	95980411	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	4	-13.3483
chr5	64456020	64456038	Low_complexity	GA-rich	Low_complexity	chr5GA-rich64455962	ProperStrand	1	chr7	116663633	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-inf
chr14	37886576	37886592	protein_coding	Lrit2	utr3	ENSMUSG00000043418	NonProperStrand	1	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-inf
chr10	23505152	23505283	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	NonProperStrand	45	chr15	5068407	5068429	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	NonProperStrand	3	2	-inf
chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	chr3	108357255	108357355	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-0.9920
chr3	90197173	90197671	protein_coding	Ints3	exon	ENSMUSG00000027933	ProperStrand	87	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-8.1832
chr6	55409137	55409154	protein_coding	Adcyap1r1	intron	ENSMUSG00000029778	NonProperStrand	12	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-8.4427
chr17	46487259	46487278	LTR	MMERGLN-int	ERV1	chr17MMERGLN-int46487100	ProperStrand	1	chr2	57219838	57219923	protein_coding	Gpd2	utr3	ENSMUSG00000026827	ProperStrand	93	1	-inf
chr2	154689555	154689596	protein_coding	Raly	exon	ENSMUSG00000027593	ProperStrand	116	chr1	39605591	39605695	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-6.0399
chr10	80640580	80640834	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr11	43511329	43511414	protein_coding	Pwwp2a	intron	ENSMUSG00000044950	ProperStrand	22	1	-8.1062
chr16	23110458	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	chr6	131330316	131330416	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	ProperStrand	408	6	-2.9869
chr19	12045261	12045283	protein_coding	Osbp	exon	ENSMUSG00000024687	ProperStrand	19	chr9	64023906	64024019	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	2	-17.3765
chr16	19883898	19884020	protein_coding	A930003A15Rik	exon	ENSMUSG00000075330	ProperStrand	93	chr19	8963086	8963180	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.5803
chr1	63099516	63099562	protein_coding	Ino80d	utr3	ENSMUSG00000040865	ProperStrand	70	chr4	131908720	131908869	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-3.2760
chr17	23955333	23955364	protein_coding	Srrm2	utr3	ENSMUSG00000039218	ProperStrand	521	chr15	88977274	88977290	protein_coding	Mapk11	intron	ENSMUSG00000053137	NonProperStrand	29	1	-10.4539
chr10	80641444	80641491	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chrX	90994217	90994234	protein_coding	Pcyt1b	utr3	ENSMUSG00000035246	ProperStrand	15	2	-14.1850
chr5	121978929	121978984	protein_coding	Mapkapk5	exon	ENSMUSG00000029454	ProperStrand	22	chr11	97642984	97643074	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.3090
chr15	82009877	82009894	protein_coding	Srebf2	exon	ENSMUSG00000022463	ProperStrand	592	chrX	6951555	6951571	protein_coding	Usp27x	exon	ENSMUSG00000046269	NonProperStrand	36	1	-9.7606
chr13	56962394	56962410	protein_coding	Trpc7	exon	ENSMUSG00000021541	ProperStrand	50	chr19	8798481	8798553	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-9.1115
chr7	112782969	112782985	protein_coding	Arfip2	utr3	ENSMUSG00000030881	ProperStrand	191	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	2	-10.6842
chr4	120820834	120820886	protein_coding	Rlf	exon	ENSMUSG00000049878	ProperStrand	58	chr11	62418014	62418036	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-5.6235
chr14	106291881	106291905	protein_coding	Spry2	utr3	ENSMUSG00000022114	ProperStrand	22	chr11	69481344	69481434	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.1045
chr1	145621808	145621829	protein_coding	Trove2	intron	ENSMUSG00000018199	NonProperStrand	4	chr10	23505204	23505269	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-6.2798
chr2	163268043	163268061	protein_coding	Gdap1l1	intron	ENSMUSG00000017943	NonProperStrand	30	chr5	116012569	116013395	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	1	-11.5495
chr1	120553066	120553084	protein_coding	Tfcp2l1	exon	ENSMUSG00000026380	ProperStrand	158	chr11	109467199	109467237	protein_coding	Wipi1	exon	ENSMUSG00000041895	ProperStrand	6	1	-16.0952
chr17	46541126	46541148	misc_RNA	7SK	.	ENSMUSG00000065808	ProperStrand	16	chr2	158185567	158185653	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-9.1496
chr17	56921736	56923074	protein_coding	Rfx2	exon	ENSMUSG00000024206	ProperStrand	32	chr10	127525544	127526057	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	1	-9.9327
chr12	78688684	78688706	DNA	MER63B	AcHobo	chr12MER63B78688568	ProperStrand	1	chr17	46814084	46814100	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	1	-inf
chr17	87200450	87200468	protein_coding	Epas1	intron	ENSMUSG00000024140	NonProperStrand	4	chr7	125835229	125835282	protein_coding	Gde1	exon	ENSMUSG00000033917	ProperStrand	2	1	-inf
chr2	144087323	144087428	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	chr11	62416947	62417015	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	7	-6.4743
chr14	31999947	32000011	protein_coding	Nisch	exon	ENSMUSG00000021910	ProperStrand	125	chr19	41970608	41970624	protein_coding	Rrp12	utr5	ENSMUSG00000035049	ProperStrand	106	1	-10.6962
chr13	55945990	55946007	LINE	L1MD2	L1	chr13L1MD255945962	ProperStrand	6	mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	1	-10.6284
chr7	52382755	52382826	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	chr2	144091712	144091812	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	ProperStrand	549	1	-2.5727
chr8	129925417	129925433	protein_coding	Pard3	utr3	ENSMUSG00000025812	NonProperStrand	11	chr14	33005065	33005138	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-7.3533
chr6	17415640	17415657	protein_coding	Met	intron	ENSMUSG00000009376	ProperStrand	32	chr4	68423440	68423456	protein_coding	Dbc1	exon	ENSMUSG00000028351	ProperStrand	78	1	-14.0536
chr12	113974902	113975002	protein_coding	AW555464	exon	ENSMUSG00000072825	ProperStrand	96	chr18	35102297	35102333	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-5.6650
chr10	82358999	82359088	protein_coding	Txnrd1	utr3	ENSMUSG00000020250	ProperStrand	47	chr4	116827120	116827151	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-7.5272
chrX	92620579	92620595	protein_coding	Fam123b	exon	ENSMUSG00000050332	ProperStrand	57	chrX	34622906	34622991	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	3	-8.2289
chr8	83312604	83312694	protein_coding	Gab1	exon	ENSMUSG00000031714	ProperStrand	72	chr19	8799829	8799892	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	2	-7.6298
chr3	137849424	137849440	protein_coding	4930579F01Rik	utr5	ENSMUSG00000012042	NonProperStrand	156	chr1	162966204	162966269	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-5.6892
chr11	6519810	6519943	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	chr17	24665449	24665501	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	3	-2.1579
chr11	62418045	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	chr14	52829470	52829570	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-1.1129
chr9	113649193	113649212	SINE	B3	B2	chr9B3113649136	ProperStrand	1	chr1	162968218	162968271	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-inf
chr3	29560015	29560040	protein_coding	Egfem1	intron	ENSMUSG00000063600	NonProperStrand	8	chr3	123210928	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.8655
chr16	46792197	46792287	SINE	B3A	B2	chr16B3A46792158	ProperStrand	1	chr14	101990414	101990494	protein_coding	Tbc1d4	intron	ENSMUSG00000033083	ProperStrand	6	1	-inf
chr12	71060124	71060172	protein_coding	Atl1	exon	ENSMUSG00000021066	ProperStrand	10	chr14	32479927	32479943	protein_coding	Btd	exon	ENSMUSG00000021900	NonProperStrand	74	1	-16.5275
chr19	41297582	41297675	protein_coding	Tm9sf3	utr3	ENSMUSG00000025016	ProperStrand	21	chrX	34622916	34622956	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	6	-19.5353
chr19	40637488	40639363	protein_coding	Aldh18a1	exon	ENSMUSG00000025007	ProperStrand	19	chr10	23505152	23505193	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.1073
chr1	72871416	72871506	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	chr8	129468795	129468875	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-1.1766
chr5	137438056	137438155	protein_coding	Fis1	intron	ENSMUSG00000019054	ProperStrand	12	chr3	123210854	123210891	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.0354
chr6	69762931	69763011	LINE	L1_Mm	L1	chr6L1_Mm69762601	NonProperStrand	1	chr7	16379771	16379861	LINE	L1_Mus1	L1	chr7L1_Mus116379054	NonProperStrand	1	1	-inf
chr11	106408109	106408209	protein_coding	Tex2	exon	ENSMUSG00000040548	ProperStrand	24	chr9	15119971	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	7	-inf
chr17	71198937	71199027	protein_coding	Tgif1	utr5	ENSMUSG00000047407	ProperStrand	64	chr11	98878373	98878456	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-6.1573
chr3	32461875	32461906	protein_coding	Mfn1	intron	ENSMUSG00000027668	ProperStrand	5	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-14.1387
chrX	103382606	103395079	protein_coding	Pgk1	exon	ENSMUSG00000062070	ProperStrand	484	chr19	8800355	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-1.0153
chr8	127317792	127317808	protein_coding	Trim67	utr5	ENSMUSG00000036913	ProperStrand	43	chr19	8963027	8963082	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.8490
chr9	103401280	103401296	protein_coding	Tmem108	exon	ENSMUSG00000042757	NonProperStrand	323	chr1	162965531	162965562	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-0.7134
chr16	45227038	45227055	protein_coding	Btla	intron	ENSMUSG00000052013	NonProperStrand	4	chr18	75162344	75162361	protein_coding	Rpl17	exon	ENSMUSG00000062328	ProperStrand	90	1	-18.4102
chr17	6945811	6945886	protein_coding	Ezr	exon	ENSMUSG00000052397	ProperStrand	126	chr2	158182156	158182194	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-3.5976
chr9	42063735	42063753	protein_coding	Sc5d	exon	ENSMUSG00000032018	ProperStrand	19	chr4	116826700	116826769	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-9.0964
chr2	90235314	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	31987657	31987675	protein_coding	Sik1	intron	ENSMUSG00000024042	ProperStrand	55	1	-4.6294
chr18	73693113	73693188	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr11	62418020	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	5	-1.1669
chrX	147245593	147245673	protein_coding	Maged2	exon	ENSMUSG00000025268	ProperStrand	7	chr3	35717896	35717986	protein_coding	Atp11b	intron	ENSMUSG00000037400	ProperStrand	39	1	-18.1033
chr15	101925985	101926071	protein_coding	Eif4b	utr3	ENSMUSG00000058655	ProperStrand	484	chr7	25397593	25397611	protein_coding	Phldb3	exon	ENSMUSG00000074277	ProperStrand	25	1	-10.9026
chr16	37777392	37777409	protein_coding	Fstl1	exon	ENSMUSG00000022816	ProperStrand	179	chr10	23505152	23505268	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-0.9208
chr11	5347550	5347640	SINE	B3	B2	chr11B35347576	NonProperStrand	1	chr11	5347412	5347502	SINE	B3A	B2	chr11B3A5347411	NonProperStrand	1	1	-inf
chr13	53073980	53073997	protein_coding	Nfil3	intron	ENSMUSG00000056749	NonProperStrand	66	chr1	162966812	162966855	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-6.0709
chr11	69421204	69421221	SINE	PB1D10	Alu	chr11PB1D1069421183	ProperStrand	1	chr14	76956323	76956339	protein_coding	Serp2	utr5	ENSMUSG00000052584	NonProperStrand	41	1	-inf
chr6	47474569	47475565	protein_coding	Cul1	exon	ENSMUSG00000029686	ProperStrand	8	chr11	69483144	69483234	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-6.3191
chr7	117189864	117189943	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr2	66343068	66346581	protein_coding	Scn9a	exon	ENSMUSG00000075316	ProperStrand	58	1	-6.2763
chr2	26493361	26493472	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr7	52381972	52382013	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	6	-0.7538
chr1	90112680	90112760	protein_coding-noncoding	Ugt1a6a	utr5	ENSMUSG00000054545	ProperStrand	1	chr1	90112807	90112897	protein_coding	Ugt1a6b	exon	ENSMUSG00000090145	ProperStrand	2	1	-inf
chr17	35299549	35299629	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	chr4	132394350	132394440	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	1	-1.1997
chr11	102157717	102157740	protein_coding	Atxn7l3	utr5	ENSMUSG00000059995	ProperStrand	24	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.3401
chr11	60533633	60533868	protein_coding	Flii	exon	ENSMUSG00000002812	ProperStrand	42	chr4	137109642	137109660	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	1	-8.8201
chr12	111875355	111875438	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr10	127521234	127521271	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	1	-4.1338
chr9	61762182	61762262	protein_coding	Rplp1	utr5	ENSMUSG00000007892	ProperStrand	116	chr11	4820972	4820990	protein_coding	Thoc5	intron	ENSMUSG00000034274	ProperStrand	325	1	-8.6075
chr11	120422019	120422099	protein_coding	P4hb	utr3	ENSMUSG00000025130	ProperStrand	83	chr11	83107811	83107901	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	1	-8.1868
chr12	110888882	110888947	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr16	90386836	90386853	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	2	-12.1132
chr6	66888038	66888056	protein_coding	Gng12	intron	ENSMUSG00000036402	NonProperStrand	3	chr1	162965531	162965588	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-9.4650
chr2	172188311	172188357	protein_coding	Aurka	exon	ENSMUSG00000027496	ProperStrand	31	chr16	23111772	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-7.7948
mmu-miR-6240	1	23	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr19	44379277	44379364	protein_coding	Scd2	utr3	ENSMUSG00000025203	ProperStrand	219	2	-5.8435
chr7	4691730	4691754	protein_coding	Suv420h2	utr5	ENSMUSG00000059851	NonProperStrand	70	chr11	74718965	74719010	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	1	-8.7165
chr13	34978601	34978661	protein_coding	Prpf4b	exon	ENSMUSG00000021413	ProperStrand	50	chr4	131908236	131908291	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-3.1301
chr2	113587331	113587348	protein_coding	Grem1	utr3	ENSMUSG00000074934	NonProperStrand	9	chr16	23111774	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.4225
chrX	90991733	90991762	protein_coding	Pcyt1b	exon	ENSMUSG00000035246	ProperStrand	15	chr11	97642952	97643014	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-8.4191
chr8	125428362	125428452	protein_coding	Ankrd11	intron	ENSMUSG00000035569	ProperStrand	380	chr5	92485085	92485165	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	1	-5.0975
chr13	55765295	55767640	protein_coding	Ddx46	exon	ENSMUSG00000021500	ProperStrand	87	chr1	162965984	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	13	-19.5651
chr19	46358852	46358900	protein_coding	Gbf1	exon	ENSMUSG00000025224	ProperStrand	50	chr16	23110546	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-4.8494
chr8	123192216	123193209	protein_coding	Cox4i1	utr5	ENSMUSG00000031818	ProperStrand	31	chr18	35716814	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.3259
chr18	10052131	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr2	127291671	127291688	protein_coding	Kcnip3	exon	ENSMUSG00000079056	NonProperStrand	18	1	-11.2407
chr7	52714464	52714564	protein_coding	Ftl1	exon	ENSMUSG00000050708	ProperStrand	807	chr2	32818884	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-1.0015
chr7	75310186	75334916	protein_coding	Igf1r	exon	ENSMUSG00000005533	ProperStrand	121	chr3	123210854	123210945	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	9	-14.3459
chrX	147504269	147506741	protein_coding	Fgd1	exon	ENSMUSG00000025265	ProperStrand	96	chr2	68841178	68841221	protein_coding	Lass6	intron	ENSMUSG00000027035	ProperStrand	32	1	-13.6395
chr6	121423179	121423195	protein_coding	Iqsec3	utr5	ENSMUSG00000040797	NonProperStrand	139	chr12	110887828	110887894	snoRNA	ENSMUSG00000084549_SNORD113	.	ENSMUSG00000084549	ProperStrand	196	1	-9.2543
chr4	154687445	154687508	protein_coding	Prkcz	intron	ENSMUSG00000029053	ProperStrand	15	chr8	128258130	128258230	protein_coding	Ntpcr	utr5	ENSMUSG00000031851	ProperStrand	7	1	-inf
chr11	57586267	57586375	protein_coding	Galnt10	intron	ENSMUSG00000020520	NonProperStrand	5	chr14	14743135	14743152	protein_coding	Gm281	intron	ENSMUSG00000084902	ProperStrand	23	1	-18.8987
chr9	110496942	110497033	protein_coding	Setd2	exon	ENSMUSG00000044791	ProperStrand	51	chr17	35089181	35089210	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-5.8038
chr13	9833554	9833653	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr2	180235718	180235735	protein_coding	Ntsr1	exon	ENSMUSG00000027568	NonProperStrand	17	1	-7.4613
chr5	96535268	96535286	protein_coding	Cnot6l	exon	ENSMUSG00000034724	NonProperStrand	15	chr17	6958363	6959004	protein_coding	Ezr	exon	ENSMUSG00000052397	ProperStrand	126	1	-14.6439
chr4	140121137	140121153	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	chr11	69483194	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.1895
chr9	65156559	65156601	protein_coding-noncoding	Clpx	utr5	ENSMUSG00000015357	ProperStrand	2	chr15	98356773	98356809	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	2	-inf
chr11	60718484	60718514	protein_coding	Gm16515	utr3	ENSMUSG00000018931	ProperStrand	5	chr18	35716837	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-6.9999
chr12	44844132	44844163	LINE	L1_Mus2	L1	chr12L1_Mus244842190	ProperStrand	1	chr11	62416575	62416625	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-inf
chr18	24363854	24363870	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr13	9494122	9494139	protein_coding	Dip2c	exon	ENSMUSG00000048264	ProperStrand	27	1	-12.9858
chr5	100855945	100855974	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr4	116827121	116827187	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-1.0690
chr1	14908903	14908919	protein_coding	Trpa1	utr5	ENSMUSG00000032769	ProperStrand	24	chr4	131865441	131865856	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-5.7790
chr18	44555634	44555651	protein_coding	Dcp2	exon	ENSMUSG00000024472	ProperStrand	44	chr1	162967540	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.0531
chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	chr7	13896362	13896402	protein_coding	Lig1	exon	ENSMUSG00000056394	ProperStrand	89	1	-6.2030
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr9	62658938	62658995	protein_coding	Fem1b	exon	ENSMUSG00000032244	ProperStrand	111	1	-6.5735
chr19	19952956	19953046	LTR	ORR1A2-int	MaLR	chr19ORR1A2-int19952535	NonProperStrand	1	chr3	159411367	159411447	LTR	ORR1A2-int	MaLR	chr3ORR1A2-int159410540	NonProperStrand	1	1	-inf
chr2	146070369	146070385	protein_coding	Ralgapa2	utr3	ENSMUSG00000037110	NonProperStrand	184	chr2	26494707	26494827	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.2906
chr1	93263063	93263079	protein_coding	Fam132b	exon	ENSMUSG00000047443	NonProperStrand	98	chr4	131908235	131908341	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-2.6785
chr11	32500864	32503675	protein_coding	Stk10	exon	ENSMUSG00000020272	NonProperStrand	73	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.9239
chr7	133815384	133815575	protein_coding	Ccdc101	exon	ENSMUSG00000030714	ProperStrand	3	chr9	92476194	92479398	protein_coding	Plod2	exon	ENSMUSG00000032374	ProperStrand	52	1	-inf
chr10	42298355	42298372	protein_coding	Nr2e1	intron	ENSMUSG00000019803	ProperStrand	32	chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-9.0024
chr7	132850977	132851067	protein_coding	Gtf3c1	exon	ENSMUSG00000032777	ProperStrand	161	chr4	131908822	131908903	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	40	-inf
chr13	12366046	12366062	protein_coding	Actn2	intron	ENSMUSG00000052374	NonProperStrand	11	chr5	108336363	108336408	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-8.2822
chr5	139709450	139709485	protein_coding	Sun1	exon	ENSMUSG00000036817	ProperStrand	108	chr17	27700328	27700358	protein_coding	Hmga1	utr3	ENSMUSG00000046711	ProperStrand	180	1	-9.9292
chr15	64753457	64753474	protein_coding	Adcy8	utr5	ENSMUSG00000022376	ProperStrand	19	chr1	89673665	89673765	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	10	-20.5337
chr9	15130692	15131005	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	chr9	15130897	15130985	snoRNA	ENSMUSG00000077394_snoU2_19	.	ENSMUSG00000077394	ProperStrand	96	22	-18.9294
chr15	34167890	34167907	protein_coding	Laptm4b	utr5	ENSMUSG00000022257	NonProperStrand	9	chr7	117117687	117117724	protein_coding	Tmem41b	utr3	ENSMUSG00000047554	ProperStrand	7	1	-20.3522
chr9	40611430	40611530	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr1	162967118	162967171	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	11	-20.4199
chr4	117886072	117886162	protein_coding	Ptprf	exon	ENSMUSG00000033295	ProperStrand	337	chr1	89681245	89681299	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-2.2657
chr17	32261292	32290915	protein_coding	Notch3	exon	ENSMUSG00000038146	ProperStrand	181	chr11	106362339	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	4	-12.2228
chr11	68620674	68620711	protein_coding	Myh10	exon	ENSMUSG00000020900	ProperStrand	91	chr8	98269986	98270076	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-4.7341
chr6	106731101	106731717	protein_coding	Crbn	exon	ENSMUSG00000005362	ProperStrand	7	chr16	23110907	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.4785
chr1	137316929	137326859	protein_coding	Ipo9	exon	ENSMUSG00000041879	ProperStrand	53	chr17	35299528	35299565	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-5.0171
chr15	78939631	78939647	protein_coding	Micall1	utr5	ENSMUSG00000033039	ProperStrand	48	chr4	131908236	131908339	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-3.2324
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr19	31157739	31157856	protein_coding	Cstf2t	exon	ENSMUSG00000053536	ProperStrand	48	1	-6.8116
chr9	99196754	99196834	protein_coding	Cep70	exon	ENSMUSG00000056267	ProperStrand	16	chr1	162967537	162967564	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-6.0334
chr14	76372327	76372416	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	NonProperStrand	1	chr12	106269349	106269429	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	NonProperStrand	38	1	-inf
chr17	27700088	27700179	protein_coding	Hmga1	utr3	ENSMUSG00000046711	ProperStrand	180	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	7	-13.5004
chr9	15118245	15118375	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	chr13	21259940	21259975	tRNA	tRNA1000-LysTTT	.	1410	ProperStrand	86	10	-inf
chr12	114047595	114047679	protein_coding	BC022687	utr5	ENSMUSG00000037594	ProperStrand	2	chr7	27358909	27358926	protein_coding	Nlrp9a	exon	ENSMUSG00000054102	ProperStrand	1	1	-inf
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr9	82736320	82736370	protein_coding	Irak1bp1	intron	ENSMUSG00000032251	ProperStrand	2	1	-17.9745
chr9	63868722	63868738	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	chr2	158185530	158185667	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-2.0991
chr11	83129994	83135473	protein_coding	Ap2b1	exon	ENSMUSG00000035152	ProperStrand	60	chr7	148634714	148634786	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-3.9861
chr3	153573528	153573574	snoRNA	ENSMUSG00000064731_Snord45b	.	ENSMUSG00000064731	ProperStrand	205	chr7	52381770	52381791	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-5.1572
chr17	27069396	27069441	protein_coding	Kifc5b	utr3	ENSMUSG00000024301	ProperStrand	6	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-11.6676
chr7	73076637	73097880	protein_coding	Pcsk6	exon	ENSMUSG00000030513	ProperStrand	32	chr11	97642994	97643074	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-6.1323
chr9	78023195	78023242	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr10	77341854	77341871	protein_coding	C330046G03Rik	intron	ENSMUSG00000069581	NonProperStrand	1	1	-inf
chr7	53247688	53247704	protein_coding	Abcc6	exon	ENSMUSG00000030834	ProperStrand	2	chr17	35088957	35089015	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-13.2951
chr1	71675906	71683930	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr9	78326990	78328220	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	2	-2.6399
chr9	120039570	120039622	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	chr13	21261552	21261601	tRNA	tRNA999-MetCAT	.	893366	ProperStrand	63	2	-5.5439
chrX	49750332	49781665	protein_coding	Gpc3	exon	ENSMUSG00000055653	ProperStrand	43	chr11	69483136	69483198	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.0333
chr8	10592076	10592093	protein_coding	Myo16	intron	ENSMUSG00000039057	NonProperStrand	45	chr4	116827165	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-7.6142
chr11	45697298	45697905	protein_coding	Clint1	exon	ENSMUSG00000006169	ProperStrand	19	chr5	74489595	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-6.0104
chr3	156224612	156224628	lincRNA	4930570G19Rik	exon	ENSMUSG00000085084	ProperStrand	326	chr16	20712617	20712772	protein_coding	Clcn2	exon	ENSMUSG00000022843	ProperStrand	7	1	-14.3584
chr7	52382234	52382275	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	chr1	173041600	173041649	tRNA	tRNA710-ValCAC	.	71954	ProperStrand	206	3	-13.4570
chr19	44188368	44188408	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr11	68886949	68887040	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	6	-3.3742
chrX	84483709	84483729	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr12	17552961	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-0.8446
chr6	115758051	115758132	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr5	147646718	147646808	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	1	-0.9052
chr3	130252121	130252137	protein_coding	Col25a1	utr3	ENSMUSG00000058897	ProperStrand	27	chr16	23110938	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.1875
chr13	9833553	9833686	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr8	125418803	125418819	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	1	-1.6747
chr6	144995874	145024567	protein_coding	Bcat1	exon	ENSMUSG00000030268	ProperStrand	49	chr16	23110943	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	10	-12.4738
chr1	55210320	55210369	protein_coding	Mob4	utr3	ENSMUSG00000025979	ProperStrand	7	chr1	162968447	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	3	-inf
chr2	153493276	153493376	protein_coding	Dnmt3b	exon	ENSMUSG00000027478	ProperStrand	19	chr4	131908236	131908301	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.3472
chr4	10498370	10498389	lincRNA	1700123O12Rik	intron	ENSMUSG00000086080	NonProperStrand	5	chr16	23110938	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr3	138589783	138589890	protein_coding	Rap1gds1	utr3	ENSMUSG00000028149	ProperStrand	16	chr15	101919793	101919830	protein_coding	Eif4b	intron	ENSMUSG00000058655	ProperStrand	484	1	-11.8171
chr19	8800118	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	chr2	144091748	144091848	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	ProperStrand	549	1	-3.3374
chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	chr8	64017611	64028375	protein_coding	Palld	exon	ENSMUSG00000058056	NonProperStrand	125	1	-5.5378
chr4	134898289	134898389	protein_coding	Srrm1	exon	ENSMUSG00000028809	ProperStrand	142	chr7	118219574	118219621	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-2.6049
chr3	40400762	40400842	LTR	MTC	MaLR	chr3MTC40400482	ProperStrand	1	chr3	40400943	40401033	Other	RMER1C	Other	chr3RMER1C40400829	ProperStrand	1	1	-inf
chr11	82123199	82123216	SINE	MIR3	MIR	chr11MIR382123070	NonProperStrand	8	chr16	23111371	23111429	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.8232
chr12	60141322	60141402	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	chr13	49779714	49779804	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-1.1780
chr2	34631184	34631207	protein_coding	Hspa5	exon	ENSMUSG00000026864	ProperStrand	181	chr2	127416763	127416853	protein_coding	Mrps5	intron	ENSMUSG00000027374	ProperStrand	84	1	-10.4222
chr5	34894211	34894227	protein_coding	Sh3bp2	utr5	ENSMUSG00000054520	ProperStrand	43	chr12	80373244	80373268	protein_coding	Zfyve26	exon	ENSMUSG00000066440	ProperStrand	44	2	-inf
chr4	118954876	118954927	protein_coding	Ybx1	exon	ENSMUSG00000028639	ProperStrand	171	chr5	74489587	74489677	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-1.9484
chr11	4970232	4970322	protein_coding	Ewsr1	exon	ENSMUSG00000009079	ProperStrand	248	chr5	108336380	108336460	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-2.2931
chr3	88880143	88880184	protein_coding	Ash1l	exon	ENSMUSG00000028053	NonProperStrand	50	chr5	115600873	115600925	protein_coding	Mlec	exon	ENSMUSG00000048578	NonProperStrand	25	2	-19.6112
chr8	128075545	128075625	DNA	Charlie10	MER1_type	chr8Charlie10128075533	NonProperStrand	1	chr8	122349737	122349827	protein_coding	Cotl1	intron	ENSMUSG00000031827	ProperStrand	11	1	-inf
chr6	75645661	75645741	LINE	L1_Mus3	L1	chr6L1_Mus375645053	NonProperStrand	1	chr6	75645795	75645885	LINE	L1_Mus3	L1	chr6L1_Mus375645728	ProperStrand	1	1	-inf
chr17	57192695	57192711	protein_coding	Slc25a23	exon	ENSMUSG00000046329	NonProperStrand	3	chr9	64143747	64143867	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-14.1384
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	75358337	75358353	protein_coding	Slc43a2	intron	ENSMUSG00000038178	NonProperStrand	7	1	-8.8025
chr15	80709236	80709326	protein_coding	Tnrc6b	intron	ENSMUSG00000047888	ProperStrand	59	chr4	131908728	131908808	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.2467
chr12	108871922	108871938	SINE	B4A	B4	chr12B4A108871776	ProperStrand	43	chr5	121655100	121655153	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.3767
chr1	71695837	71697184	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr11	77996557	77996577	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-1.2301
chr7	107778383	107778399	protein_coding	Rab6a	exon	ENSMUSG00000030704	ProperStrand	23	chr15	72949811	72949903	protein_coding	Eif2c2	exon	ENSMUSG00000036698	ProperStrand	154	1	-13.3638
chr3	137806308	137806328	protein_coding	Mttp	utr5	ENSMUSG00000028158	ProperStrand	13	chr12	92811873	92811983	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	5	-19.1987
chrX	84483704	84483755	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr6	125136617	125136661	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	1	-1.7942
chr11	3149994	3150046	protein_coding	Drg1	utr3	ENSMUSG00000020457	ProperStrand	19	chr14	33005139	33005236	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-6.2373
chr1	190180857	190181745	protein_coding	Ush2a	exon	ENSMUSG00000026609	ProperStrand	24	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-9.5860
chr2	146125209	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	chr8	26879777	26879793	protein_coding	Gm17484	utr3	ENSMUSG00000091514	ProperStrand	68	1	-10.8135
chr7	134110716	134111233	protein_coding	Sez6l2	exon	ENSMUSG00000030683	ProperStrand	94	chr19	5688291	5688370	protein_coding	Pcnxl3	utr5	ENSMUSG00000054874	ProperStrand	96	1	-11.4665
chr13	67852129	67852146	protein_coding	4930441O14Rik	intron	ENSMUSG00000044081	ProperStrand	13	chr11	106362638	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-10.5079
chr14	32042378	32042394	protein_coding	Sema3g	utr3	ENSMUSG00000021904	NonProperStrand	47	chr17	39985194	39985257	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-6.4144
chr6	124760945	124761005	protein_coding	Tpi1	utr3	ENSMUSG00000023456	ProperStrand	94	chr10	110918597	110918687	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	3	-6.9018
chr2	84899408	84899464	protein_coding	Tnks1bp1	exon	ENSMUSG00000033955	ProperStrand	23	chr16	23111374	23111464	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-10.0533
chr12	113960803	113960821	protein_coding	AW555464	intron	ENSMUSG00000072825	ProperStrand	96	chr3	123210879	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.3504
chr15	99329179	99329198	protein_coding	Faim2	utr3	ENSMUSG00000023011	ProperStrand	45	chr10	110918549	110918693	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	3	-9.7407
chr7	149562019	149562109	protein_coding	Ctsd	utr3	ENSMUSG00000007891	ProperStrand	60	chr12	17552973	17553053	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-5.0892
chr17	45708474	45708540	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr11	55296293	55296332	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	2	-1.3138
chr11	80965641	80965658	protein_coding	Accn1	exon	ENSMUSG00000020704	NonProperStrand	228	chr3	145601279	145601864	protein_coding	2410004B18Rik	exon	ENSMUSG00000036873	ProperStrand	10	1	-14.3002
chr2	70927899	70927917	protein_coding	Dcaf17	exon	ENSMUSG00000041966	NonProperStrand	89	chr16	23110911	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-1.8358
chr9	40612363	40612393	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr15	36538120	36538179	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	1	-2.9167
mmu-miR-6240	2	25	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr7	80547651	80547667	protein_coding	Rgma	intron	ENSMUSG00000070509	ProperStrand	46	1	-6.4284
chr16	57391760	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr6	124665423	124665523	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	1	-1.8258
chrX	71200063	71200424	protein_coding	Hcfc1	exon	ENSMUSG00000031386	ProperStrand	424	chr8	32260345	32260425	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-1.2717
chr4	116875172	116875248	snRNA	ENSMUSG00000070228_U5	.	ENSMUSG00000070228	ProperStrand	131	chr3	68889026	68889065	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-1.9199
chr13	58495507	58495698	protein_coding	Hnrnpk	exon	ENSMUSG00000021546	ProperStrand	117	chr10	110918549	110918639	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	5	-10.8273
chr16	11220678	11220697	protein_coding	Gspt1	utr3	ENSMUSG00000062203	ProperStrand	49	chr16	23111454	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.5489
chr7	19665916	19665990	protein_coding	Dmwd	exon	ENSMUSG00000030410	ProperStrand	41	chr11	120209160	120209353	protein_coding	Actg1	exon	ENSMUSG00000062825	ProperStrand	178	1	-11.8997
chr4	43505657	43505721	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr8	75687960	75687979	protein_coding	Large	intron	ENSMUSG00000004383	NonProperStrand	16	1	-5.5966
chr19	8800356	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	chr9	15119287	15119412	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	48	-inf
chr4	149702233	149702260	protein_coding	Rere	intron	ENSMUSG00000039852	ProperStrand	76	chr1	24619350	24619400	protein_coding	Gm10222	exon	ENSMUSG00000067736	ProperStrand	42	1	-13.5574
chr3	96526482	96527438	protein_coding	Polr3c	exon	ENSMUSG00000028099	ProperStrand	16	chr7	29136581	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	6	-22.1549
chr16	37777390	37777408	protein_coding	Fstl1	exon	ENSMUSG00000022816	ProperStrand	179	chr11	69483136	69483208	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-1.7121
chrX	150765543	150765559	LINE	L1_Mus2	L1	chrXL1_Mus2150765117	NonProperStrand	49	chr4	131865867	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.0906
chr5	74489655	74489680	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr15	77599982	77600034	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	1	-1.5845
chr11	94502596	94502686	protein_coding	Lrrc59	exon	ENSMUSG00000020869	ProperStrand	115	chr8	44381248	44381328	protein_coding	Zfp42	exon	ENSMUSG00000051176	ProperStrand	127	1	-10.5013
chr8	72287172	72287188	protein_coding	Zfp866	utr3	ENSMUSG00000043090	NonProperStrand	134	chr9	120038564	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-3.1254
chr10	12403072	12403116	protein_coding	Utrn	exon	ENSMUSG00000019820	ProperStrand	69	chr4	131908689	131908745	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.0398
chr10	53331274	53332719	protein_coding	Mcm9	exon	ENSMUSG00000058298	ProperStrand	24	chr9	120039540	120039620	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-5.0594
chr11	53075178	53075201	protein_coding	Hspa4	exon	ENSMUSG00000020361	ProperStrand	69	chr9	120039581	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.0660
chr9	43977188	43977209	protein_coding	Cbl	exon	ENSMUSG00000034342	ProperStrand	7	chr5	122303536	122303636	protein_coding	Fam109a	utr3	ENSMUSG00000044134	ProperStrand	12	1	-21.2490
chr8	23411013	23411033	protein_coding	Tpte	intron	ENSMUSG00000031481	ProperStrand	2	chr1	162965531	162965588	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-10.5602
chr2	135360025	135360043	antisense	9630028H03Rik	.	ENSMUSG00000085631	NonProperStrand	22	chr3	108357553	108357639	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-6.5115
chr6	122661778	122663981	protein_coding	Nanog	utr3	ENSMUSG00000012396	ProperStrand	66	chr4	131908236	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-3.9052
chr13	57772627	57772649	protein_coding	Spock1	intron	ENSMUSG00000056222	NonProperStrand	20	chr4	131865856	131865914	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.6810
chr7	54253269	54253287	protein_coding	Spty2d1	exon	ENSMUSG00000049516	ProperStrand	20	chr7	30783227	30798872	protein_coding	Zfp568	exon	ENSMUSG00000074221	ProperStrand	110	1	-14.3341
chr6	70918283	70918300	SINE	B1F1	Alu	chr6B1F170918156	NonProperStrand	7	chr9	50816824	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	1	-16.2568
chr11	120677721	120680463	protein_coding	Fasn	exon	ENSMUSG00000025153	ProperStrand	298	chr4	131865855	131865988	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	6	-2.5240
chr17	24857479	24858176	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr7	116663665	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	13	-13.0078
chr4	116883486	116883565	snRNA	ENSMUSG00000070237_U5	.	ENSMUSG00000070237	ProperStrand	154	chr7	116664819	116664913	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	6	-8.4625
chr11	115885068	115885213	protein_coding	H3f3b	exon	ENSMUSG00000016559	ProperStrand	76	chr17	24857740	24857782	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.9111
chr14	97559855	97559872	LINE	L1Md_F3	L1	chr14L1Md_F397556327	ProperStrand	1	chr16	23110967	23110991	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr7	135852622	135852679	protein_coding	Mcmbp	exon	ENSMUSG00000048170	ProperStrand	87	chr3	123210853	123210971	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	9	-17.3691
chr7	52975759	52975812	protein_coding	Rpl18	exon	ENSMUSG00000059070	ProperStrand	116	chr16	23111694	23111784	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-1.9210
chr2	23366520	23366538	protein_coding	Spopl	utr3	ENSMUSG00000026771	ProperStrand	5	chr6	125113054	125113209	protein_coding	Gapdh	exon	ENSMUSG00000057666	ProperStrand	356	1	-14.9065
chr3	95463759	95463775	protein_coding	Mcl1	exon	ENSMUSG00000038612	ProperStrand	75	chr5	130300419	130300502	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.1352
chr10	127152705	127152721	protein_coding	Myo1a	exon	ENSMUSG00000025401	ProperStrand	93	chr8	35040015	35040115	protein_coding	Rbpms	utr5	ENSMUSG00000031586	ProperStrand	58	1	-12.5013
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-0.9658
chr4	63631461	63631477	protein_coding	Tnc	exon	ENSMUSG00000028364	NonProperStrand	2	chr10	23505151	23505236	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-8.0476
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	4	-1.9213
chr11	115967279	115967295	protein_coding	Trim47	utr3	ENSMUSG00000020773	NonProperStrand	6	chr7	29136524	29136578	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-6.8330
chr13	59738651	59738668	protein_coding	Golm1	utr3	ENSMUSG00000021556	NonProperStrand	12	chr1	59748784	59748828	snoRNA	ENSMUSG00000077345_Snord70	.	ENSMUSG00000077345	ProperStrand	61	1	-16.5056
chr6	124350871	124350888	protein_coding	Pex5	intron	ENSMUSG00000005069	ProperStrand	27	chr4	131865854	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.1241
chr8	79799129	79799219	protein_coding	Arhgap10	intron	ENSMUSG00000037148	NonProperStrand	15	chr2	121319934	121320023	protein_coding	Mfap1a	utr3	ENSMUSG00000068479	ProperStrand	14	1	-19.9522
chrX	148066072	148066089	protein_coding	Phf8	utr3	ENSMUSG00000041229	ProperStrand	17	chr4	131865859	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.9909
chr18	35062789	35062889	protein_coding	Etf1	utr3	ENSMUSG00000024360	ProperStrand	74	chr18	33954900	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	7	-20.6124
chr2	156656559	156656590	LTR	RLTR1	ERV1	chr2RLTR1156656367	ProperStrand	10	chr16	23111448	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	5	-18.9178
chr4	131399490	131399506	protein_coding	Mecr	exon	ENSMUSG00000028910	NonProperStrand	109	chr12	17552999	17553091	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-3.9501
chr15	101117457	101117547	protein_coding	9430023L20Rik	exon	ENSMUSG00000037204	ProperStrand	11	chr12	106269323	106269403	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-7.5084
chr5	138721787	138721823	protein_coding	Stag3	utr5	ENSMUSG00000036928	ProperStrand	53	chr19	8799368	8799430	snoRNA	ENSMUSG00000065280_SNORD28	.	ENSMUSG00000065280	ProperStrand	269	1	-10.5554
chr2	160698759	160698776	sense_intronic	Gm16751	.	ENSMUSG00000085303	ProperStrand	7	chr11	62416575	62416618	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-9.5351
chr10	80641598	80641885	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr7	52381719	52381757	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-1.0631
chr7	150717306	150717425	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	chr13	49779713	49779803	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	2	-0.9751
chr16	37882853	37882943	protein_coding	Lrrc58	utr3	ENSMUSG00000034158	ProperStrand	23	chr7	133835158	133835321	protein_coding	Slx1b	exon	ENSMUSG00000059772	ProperStrand	15	1	-17.8830
chr4	126354974	126355027	protein_coding	Psmb2	utr5	ENSMUSG00000028837	ProperStrand	8	chr1	88171063	88171080	protein_coding	Armc9	exon	ENSMUSG00000062590	NonProperStrand	5	1	-18.8889
chr17	72177114	72177863	protein_coding	Clip4	exon	ENSMUSG00000024059	ProperStrand	8	chr9	99483993	99484009	protein_coding	Dbr1	exon	ENSMUSG00000032469	ProperStrand	162	1	-15.4499
chr11	35736398	35736421	protein_coding	Wwc1	intron	ENSMUSG00000018849	ProperStrand	52	chr10	110918633	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-3.7133
chr3	127337233	127337251	protein_coding	Neurog2	exon	ENSMUSG00000027967	ProperStrand	1	chr19	8963089	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-inf
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr11	97642952	97643080	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	16	-12.6746
chr9	17888552	17888642	LINE	L1Md_T	L1	chr9L1Md_T17887132	NonProperStrand	1	chr7	54443207	54443297	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	1	-inf
chr10	99582852	99582942	LINE	Lx8	L1	chr10Lx899582824	ProperStrand	1	chr10	99582747	99582837	LTR	MTB	MaLR	chr10MTB99582422	NonProperStrand	1	1	-inf
chr4	45001832	45001922	protein_coding	Grhpr	exon	ENSMUSG00000035637	ProperStrand	35	chr16	18240847	18240927	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	1	-10.2114
chr10	119913140	119913222	protein_coding	Hmga2	utr5	ENSMUSG00000056758	ProperStrand	3	chr4	131908236	131908295	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-7.2242
chr1	167119788	167119834	protein_coding	Sft2d2	intron	ENSMUSG00000040848	ProperStrand	25	chr2	26451868	26451884	protein_coding	Gm20532	intron	ENSMUSG00000092356	ProperStrand	46	1	-15.6256
chr4	137068373	137068557	protein_coding	Hspg2	exon	ENSMUSG00000028763	NonProperStrand	18	chr7	116663648	116663748	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	NonProperStrand	51	1	-16.0942
chr3	26860764	26860854	protein_coding	Spata16	intron	ENSMUSG00000039335	NonProperStrand	10	chr15	66503578	66503657	protein_coding	Tg	intron	ENSMUSG00000053469	NonProperStrand	4	1	-19.9092
chr2	129998684	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr11	120208419	120208458	protein_coding	Actg1	exon	ENSMUSG00000062825	ProperStrand	178	1	-5.9558
chr2	90235312	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	31895791	31899711	protein_coding	Hpn	utr5	ENSMUSG00000001249	ProperStrand	126	1	-3.0859
chr5	107303155	107303171	protein_coding	Hfm1	intron	ENSMUSG00000043410	ProperStrand	23	chr19	8963129	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.0031
chr13	9833551	9833660	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr6	94776855	94776876	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	2	-2.4743
chr8	87366601	87366655	protein_coding	Calr	exon	ENSMUSG00000003814	ProperStrand	232	chr8	73419660	73419760	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-1.0030
chr11	28753258	28753303	protein_coding	Efemp1	utr5	ENSMUSG00000020467	ProperStrand	7	chr15	79913288	79913346	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	4	-inf
chr4	46508071	46508117	snoRNA	ENSMUSG00000064410_SNORA36	.	ENSMUSG00000064410	ProperStrand	133	chr11	69483136	69483192	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.2195
chr11	120501451	120501549	protein_coding	Pycr1	utr3	ENSMUSG00000025140	ProperStrand	17	chr9	14555362	14555379	protein_coding	Fut4	exon	ENSMUSG00000049307	NonProperStrand	19	1	-18.1299
chr19	59534008	59534026	protein_coding	Emx2	exon	ENSMUSG00000043969	NonProperStrand	87	chr1	162966812	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-5.5295
chr4	134878386	134878404	protein_coding	Srrm1	exon	ENSMUSG00000028809	NonProperStrand	25	chr4	131865867	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.2649
chr10	69682418	69682434	protein_coding	2310015B20Rik	utr3	ENSMUSG00000019933	NonProperStrand	3	chr11	6428077	6428165	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	NonProperStrand	91	2	-inf
chr15	80081031	80081066	protein_coding	Smcr7l	utr3	ENSMUSG00000022412	ProperStrand	19	chr2	77734469	77734521	protein_coding	Cwc22	exon	ENSMUSG00000027014	ProperStrand	17	1	-18.1647
chr5	33951045	33951076	protein_coding	Fam53a	exon	ENSMUSG00000037339	ProperStrand	18	chr10	86221857	86221873	protein_coding	BC030307	exon	ENSMUSG00000044937	ProperStrand	77	1	-15.2537
chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr19	42490411	42490428	protein_coding	Crtac1	intron	ENSMUSG00000042401	ProperStrand	26	1	-8.1274
chr14	32000273	32000363	protein_coding	Nisch	exon	ENSMUSG00000021910	ProperStrand	125	chr18	73693168	73693184	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	2	-6.8871
chr1	90160458	90160538	protein_coding	Hjurp	utr3	ENSMUSG00000044783	ProperStrand	110	chrX	34622930	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-2.1245
chr9	40612879	40612905	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	chr11	69483136	69483224	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-0.9152
chr4	131908232	131908262	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr9	45738234	45738334	protein_coding	Tagln	utr3	ENSMUSG00000032085	ProperStrand	2	2	-inf
chr6	70794802	70794819	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chr8	113569436	113569486	protein_coding	Aars	exon	ENSMUSG00000031960	ProperStrand	355	1	-7.8676
chrX	70938139	70938233	protein_coding	Bcap31	intron	ENSMUSG00000002015	ProperStrand	21	chr16	23110965	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.5481
chr9	64025226	64025559	protein_coding	Rpl4	exon	ENSMUSG00000032399	NonProperStrand	4	chr9	120039581	120039671	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	NonProperStrand	24	1	-20.7136
chr5	8723231	8726794	protein_coding	Abcb1a	exon	ENSMUSG00000040584	ProperStrand	12	chr4	131865952	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.6729
chr19	5796866	5800281	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr2	130103452	130103502	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	2	-4.4767
chr2	93655336	93655352	protein_coding	Ext2	intron	ENSMUSG00000027198	NonProperStrand	21	chr7	52976100	52976131	protein_coding	Rpl18	exon	ENSMUSG00000059070	ProperStrand	116	1	-14.1141
chr8	72821815	72821850	protein_coding	Ddx49	exon	ENSMUSG00000057788	ProperStrand	68	chr9	64023719	64023746	snoRNA	ENSMUSG00000064918_SNORD18	.	ENSMUSG00000064918	ProperStrand	370	1	-9.4178
chr16	96343511	96343601	protein_coding	Hmgn1	utr3	ENSMUSG00000040681	ProperStrand	38	chr11	69483199	69483279	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.2572
chr2	52243606	52243645	antisense	Gm13522	.	ENSMUSG00000086447	ProperStrand	1	chr4	131908689	131908797	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-inf
chr7	129313079	129313157	protein_coding	Plk1	utr3	ENSMUSG00000030867	ProperStrand	146	chr13	113737156	113737173	protein_coding	Dhx29	exon	ENSMUSG00000042426	ProperStrand	15	1	-14.3545
chr9	20885472	20885495	protein_coding	Raver1	exon	ENSMUSG00000010205	ProperStrand	69	chr12	55797771	55797861	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	3	-16.6272
chr10	34489346	34489365	SINE	B3A	B2	chr10B3A34489322	NonProperStrand	1	chr5	65782019	65782065	protein_coding	Rpl9	exon	ENSMUSG00000047215	ProperStrand	113	1	-inf
chr8	86465151	86465268	protein_coding	Lphn1	utr3	ENSMUSG00000013033	ProperStrand	221	chr18	33954917	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	4	-5.6731
chr2	131071052	131071142	protein_coding	Mavs	exon	ENSMUSG00000037523	ProperStrand	6	chr7	116663682	116663762	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-7.0045
chr2	162909294	162909384	protein_coding	Mybl2	utr3	ENSMUSG00000017861	ProperStrand	230	chr1	180261231	180261273	protein_coding	Hnrnpu	exon	ENSMUSG00000039630	ProperStrand	286	3	-16.7759
chr7	52714460	52714560	protein_coding	Ftl1	exon	ENSMUSG00000050708	ProperStrand	807	chr9	64022857	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-3.0240
chr1	64082295	64082319	protein_coding	Klf7	utr3	ENSMUSG00000025959	ProperStrand	9	chr4	128867196	128867212	protein_coding	Yars	exon	ENSMUSG00000028811	ProperStrand	131	1	-15.6238
chr14	32479927	32479943	protein_coding	Btd	exon	ENSMUSG00000021900	NonProperStrand	74	chr8	129468768	129468817	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-4.0164
chr8	122481306	122481370	protein_coding	Usp10	utr3	ENSMUSG00000031826	ProperStrand	98	chr3	123210890	123210980	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	8	-13.9404
chr8	63416250	63417363	protein_coding	Clcn3	exon	ENSMUSG00000004319	ProperStrand	93	chr5	108336374	108336461	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-4.0453
chr17	85109655	85109709	protein_coding	Lrpprc	exon	ENSMUSG00000024120	ProperStrand	98	chr7	51505224	51505308	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	1	-7.1739
chr2	179322377	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr5	108336364	108336490	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-2.9318
chr12	57438785	57438812	protein_coding	Mbip	exon	ENSMUSG00000021028	ProperStrand	15	chr10	23505149	23505232	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-6.1124
chr6	145764118	145764134	protein_coding	Rassf8	exon	ENSMUSG00000030259	ProperStrand	23	chr11	97642971	97643005	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.2234
chr5	114228152	114228196	protein_coding	Iscu	utr3	ENSMUSG00000025825	ProperStrand	15	chr9	120038471	120038561	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.6922
chr2	147974246	147974264	LTR	MER67A	ERV1	chr2MER67A147974015	ProperStrand	2	chr2	26493474	26493572	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	2	-inf
chr17	31981637	31981689	protein_coding	Sik1	utr3	ENSMUSG00000024042	ProperStrand	55	chr4	131865900	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	6	-12.1228
chr14	70198077	70199496	protein_coding	Rhobtb2	exon	ENSMUSG00000022075	ProperStrand	22	chr11	69483158	69483248	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.2846
chr1	75484537	75484553	protein_coding	Obsl1	exon	ENSMUSG00000026211	NonProperStrand	192	chr7	19682864	19682911	protein_coding	Six5	exon	ENSMUSG00000040841	ProperStrand	8	2	-20.1765
chr1	129203343	129203433	protein_coding	Mgat5	utr5	ENSMUSG00000036155	ProperStrand	33	chr1	145626105	145626185	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-10.0334
chr16	90226454	90226513	protein_coding	Sod1	utr3	ENSMUSG00000022982	ProperStrand	75	chr16	23111451	23111503	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-3.1411
chr6	112599737	112599773	protein_coding	Rad18	utr3	ENSMUSG00000030254	ProperStrand	38	chr16	23111416	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-5.4368
chrX	107396011	107396027	LTR	RMER17A	ERVK	chrXRMER17A107395334	NonProperStrand	27	chr13	44980102	44980150	protein_coding	Jarid2	exon	ENSMUSG00000038518	ProperStrand	372	1	-11.2724
chr19	44188400	44188490	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr9	64143771	64143851	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-2.5199
chr11	84655033	84655103	protein_coding	Ggnbp2	exon	ENSMUSG00000020530	ProperStrand	30	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0481
chr11	75570404	75578194	protein_coding	Ywhae	utr3	ENSMUSG00000020849	ProperStrand	176	chr10	39978386	39978484	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	2	-5.8188
chr15	103189522	103196731	protein_coding	Itga5	exon	ENSMUSG00000000555	ProperStrand	28	chr18	35716707	35716787	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.5142
chr13	107911779	107911801	SINE	B4A	B4	chr13B4A107911649	NonProperStrand	8	chr16	23111708	23111755	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-9.4467
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr4	138919145	138919597	protein_coding	C230096C10Rik	exon	ENSMUSG00000078517	ProperStrand	69	1	-6.7501
chr2	83693562	83693578	protein_coding	Fam171b	exon	ENSMUSG00000048388	NonProperStrand	175	chr2	130103450	130103486	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-5.9438
chr2	152514464	152514482	protein_coding	H13	exon	ENSMUSG00000019188	ProperStrand	15	chr11	3649570	3649587	protein_coding	Osbp2	intron	ENSMUSG00000020435	ProperStrand	60	1	-16.1548
chr3	97817679	97851651	protein_coding	Notch2	exon	ENSMUSG00000027878	ProperStrand	86	chr13	96754011	96754028	protein_coding	Sv2c	intron	ENSMUSG00000051111	ProperStrand	6	1	-17.2739
chr11	45957409	45957463	protein_coding	Adam19	utr3	ENSMUSG00000011256	ProperStrand	134	chr7	29136626	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-3.5452
chrX	54040147	54040165	protein_coding	Fhl1	intron	ENSMUSG00000023092	ProperStrand	6	chr5	108336363	108336406	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-9.5743
chr3	88369632	88369722	protein_coding	Ubqln4	exon	ENSMUSG00000008604	ProperStrand	49	chr5	108334196	108334276	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-5.2126
chr1	166187083	166187150	protein_coding	Slc19a2	exon	ENSMUSG00000040918	ProperStrand	22	chr5	74489644	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-5.7174
chr8	72593931	72594031	protein_coding	Sugp1	exon	ENSMUSG00000011306	ProperStrand	20	chr16	23110553	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.4825
chr18	56905628	56905647	protein_coding	Lmnb1	intron	ENSMUSG00000024590	ProperStrand	176	chr13	107697845	107697923	protein_coding	Ipo11	intron	ENSMUSG00000042590	ProperStrand	120	1	-9.7632
chr13	46862892	46862962	snoRNA	ENSMUSG00000064558_SNORA55	.	ENSMUSG00000064558	ProperStrand	187	chr7	116664819	116664910	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-0.8627
chr17	27559699	27559717	protein_coding	Grm4	utr3	ENSMUSG00000063239	ProperStrand	147	chr17	24857717	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-0.9725
chr11	99091514	99091532	protein_coding-noncoding	Smarce1	utr3	ENSMUSG00000037935	NonProperStrand	17	chr18	38061741	38062732	protein_coding	Diap1	exon	ENSMUSG00000024456	ProperStrand	77	1	-15.3974
chr17	24858600	24858762	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr18	73693112	73693144	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-2.1691
chr2	90235298	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	50413550	50413567	protein_coding	AU019823	utr3	ENSMUSG00000059820	NonProperStrand	18	1	-6.8363
chr1	129856581	129856672	protein_coding	Zranb3	exon	ENSMUSG00000036086	ProperStrand	19	chr15	34372956	34372973	protein_coding	Rpl30	utr5	ENSMUSG00000058600	ProperStrand	65	2	-19.7288
chr15	72955615	72955680	protein_coding	Eif2c2	exon	ENSMUSG00000036698	ProperStrand	154	chr19	8799054	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	3	-9.7496
chr13	46803234	46803251	protein_coding	Nup153	exon	ENSMUSG00000021374	ProperStrand	69	chr7	148634807	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-3.7247
chr5	36924510	36924600	protein_coding	Tbc1d14	intron	ENSMUSG00000029192	ProperStrand	25	chr5	19915477	19915557	protein_coding	Magi2	intron	ENSMUSG00000040003	NonProperStrand	24	1	-16.8593
chr8	98269959	98270059	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	chr8	112363200	112363275	snoRNA	ENSMUSG00000077549_Snord71	.	ENSMUSG00000077549	ProperStrand	196	1	-3.2990
chr9	120039531	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	chrX	34622904	34623039	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	52	-0.7327
chr2	90235295	90235325	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	72180855	72180872	protein_coding	Atoh8	intron	ENSMUSG00000037621	NonProperStrand	61	1	-4.4311
chr4	118954247	118954786	protein_coding	Ybx1	exon	ENSMUSG00000028639	ProperStrand	171	chr5	130295493	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	4	-11.0320
mmu-miR-2137	0	20	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	chrX	93136011	93136027	protein_coding	Las1l	exon	ENSMUSG00000057421	ProperStrand	248	1	-8.7145
chr6	89417423	89417440	protein_coding	Chchd6	exon	ENSMUSG00000030086	NonProperStrand	6	chr6	147003521	147003543	protein_coding	Mrps35	intron	ENSMUSG00000040112	ProperStrand	15	1	-19.6211
chr5	89383967	89457318	protein_coding	Slc4a4	exon	ENSMUSG00000060961	NonProperStrand	195	chr8	73419731	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-1.2291
chr2	129999370	129999474	protein_coding	Snrpb	exon	ENSMUSG00000027404	ProperStrand	21	chr9	22168437	22168457	protein_coding	Anln	exon	ENSMUSG00000036777	ProperStrand	133	1	-13.8430
chr7	116078151	116078169	protein_coding	Eif3f	exon	ENSMUSG00000031029	ProperStrand	69	chr19	8800376	8800479	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	3	-8.2381
chr5	21188982	21188998	protein_coding	Napepld	exon	ENSMUSG00000044968	ProperStrand	2	chr4	131865855	131865883	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-8.7800
chrX	96245892	96245908	protein_coding	Stard8	intron	ENSMUSG00000031216	ProperStrand	142	chr4	116827121	116827187	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-5.3463
chr2	25105521	25107254	protein_coding	Ndor1	exon	ENSMUSG00000006471	NonProperStrand	84	chr12	110874224	110874290	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	1	-9.3026
chr7	3596989	3597089	protein_coding	Cnot3	utr5	ENSMUSG00000035632	ProperStrand	55	chr1	91358413	91358430	protein_coding	Agap1	intron	ENSMUSG00000055013	ProperStrand	229	2	-16.9264
chr4	45025255	45025271	protein_coding	Zbtb5	utr5	ENSMUSG00000049657	NonProperStrand	2	chr11	6428076	6428154	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-10.4671
chrX	40944841	40944857	protein_coding	Gm362	exon	ENSMUSG00000078320	ProperStrand	129	chr7	52382753	52382832	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-5.2496
chr7	3586347	3586447	protein_coding	Prpf31	exon	ENSMUSG00000008373	ProperStrand	17	chr16	23110942	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	7	-15.7577
chr5	23268233	23274586	protein_coding	Pus7	exon	ENSMUSG00000057541	ProperStrand	23	chr4	131908244	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-5.2237
chr3	66100724	66100740	protein_coding	Veph1	utr5	ENSMUSG00000027831	NonProperStrand	92	chr17	39985369	39985421	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-5.0979
chr4	43505656	43505722	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr11	100275659	100275677	protein_coding	Leprel4	exon	ENSMUSG00000006931	ProperStrand	32	1	-4.2379
chr17	33806014	33814219	protein_coding	Hnrnpm	utr5	ENSMUSG00000059208	ProperStrand	56	chr7	118219574	118219602	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	5	-17.3707
chr13	25354120	25354136	protein_coding	Nrsn1	exon	ENSMUSG00000048978	ProperStrand	24	chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-9.5860
chr9	110534333	110534350	protein_coding-noncoding	Nbeal2	utr3	ENSMUSG00000056724	ProperStrand	6	chr8	113362430	113362494	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	1	-14.0211
chr8	127353807	127353824	protein_coding	Trim67	utr3	ENSMUSG00000036913	NonProperStrand	8	chr8	41570003	41570019	protein_coding	Zdhhc2	utr3	ENSMUSG00000039470	NonProperStrand	85	1	-16.6908
chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	chr11	55296277	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-2.2369
chr19	8856812	8856867	protein_coding	Taf6l	intron	ENSMUSG00000003680	ProperStrand	1	chr1	89377777	89377793	protein_coding	Ngef	exon	ENSMUSG00000026259	NonProperStrand	41	1	-inf
chr10	110918574	110918664	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	chr12	110874223	110874290	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	1	-0.8399
chrX	100677619	100677635	antisense	Tsix	.	ENSMUSG00000085715	ProperStrand	40	chr8	109185920	109187690	protein_coding	Cdh1	exon	ENSMUSG00000000303	ProperStrand	283	1	-11.0216
chr19	27291761	27291777	protein_coding	Vldlr	utr5	ENSMUSG00000024924	NonProperStrand	36	chr2	57090809	57090826	protein_coding	Gpd2	utr5	ENSMUSG00000026827	ProperStrand	93	1	-13.4650
chr4	82114659	82114675	protein_coding	Nfib	intron	ENSMUSG00000008575	ProperStrand	50	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-11.1305
chr1	173341933	173341949	protein_coding	Usf1	utr5	ENSMUSG00000026641	NonProperStrand	144	chr17	39985202	39985294	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-4.2408
chr2	89368462	89368479	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	chr17	13115664	13115783	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	6	-19.2477
chr18	35716839	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	chr13	62644615	62644696	snoRNA	ENSMUSG00000075946_SNORA25	.	ENSMUSG00000075946	ProperStrand	11	2	-8.8767
chr11	115971148	115971164	protein_coding	Trim47	exon	ENSMUSG00000020773	ProperStrand	14	chr6	146536455	146536549	protein_coding	Fgfr1op2	intron	ENSMUSG00000040242	ProperStrand	4	1	-inf
chr5	137964015	137964242	protein_coding	Epo	intron	ENSMUSG00000029711	ProperStrand	27	chr10	23505152	23505222	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	NonProperStrand	45	2	-21.3699
chr7	29959682	29959754	protein_coding	Psmd8	exon	ENSMUSG00000030591	ProperStrand	23	chr9	120038000	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-6.5933
chr2	84877395	84877450	protein_coding	Ssrp1	utr5	ENSMUSG00000027067	ProperStrand	118	chr17	24665479	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-3.6594
chr5	124449589	124449786	protein_coding	Hip1r	exon	ENSMUSG00000000915	NonProperStrand	3	chr14	31827478	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	2	-22.3022
chr9	108192911	108192928	protein_coding	Nicn1	exon	ENSMUSG00000032606	ProperStrand	12	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.6729
chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr13	55549268	55549285	protein_coding	Grk6	intron	ENSMUSG00000074886	NonProperStrand	5	1	-8.6129
chr5	116394629	116394646	protein_coding	Cit	intron	ENSMUSG00000029516	NonProperStrand	4	chr11	6428088	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-8.6824
chr7	135019508	135019529	protein_coding	Zfp668	utr5	ENSMUSG00000049728	ProperStrand	7	chr1	63225577	63225658	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	2	-17.6522
chr5	111158866	111185612	protein_coding	Ep400	exon	ENSMUSG00000029505	ProperStrand	176	chr16	23111738	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	5	-4.1345
chr2	90235298	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	108783076	108783093	protein_coding	Axin2	utr5	ENSMUSG00000000142	NonProperStrand	81	1	-3.8951
chr12	83763367	83763384	protein_coding	Rgs6	intron	ENSMUSG00000021219	NonProperStrand	65	chr2	130103751	130103825	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-8.3113
chr15	31226074	31226090	protein_coding	Ankrd33b	utr3	ENSMUSG00000022237	ProperStrand	55	chr7	30231525	30231593	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	1	-9.0213
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr10	56108131	56108232	protein_coding	Gja1	exon	ENSMUSG00000050953	ProperStrand	70	1	-8.4071
chr19	44188443	44188491	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr3	90197173	90197671	protein_coding	Ints3	exon	ENSMUSG00000027933	ProperStrand	87	1	-7.0555
chr5	145019866	145019925	protein_coding	Bri3	intron	ENSMUSG00000047843	ProperStrand	16	chr6	124691242	124691303	protein_coding	Grcc10	utr5	ENSMUSG00000072772	ProperStrand	88	4	-18.9768
chr14	19102840	19102932	protein_coding	Rpl15	exon	ENSMUSG00000012405	NonProperStrand	3	chr2	158185530	158185576	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	NonProperStrand	2	1	-inf
chr13	8989905	8990002	protein_coding	Gtpbp4	intron	ENSMUSG00000021149	ProperStrand	26	chr11	55296281	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	4	-inf
chr17	32957268	32957284	lincRNA	Gm16684	intron	ENSMUSG00000085948	ProperStrand	43	chr7	116663728	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.0984
chr4	131866269	131866292	lincRNA	Snhg12	exon	ENSMUSG00000086290	ProperStrand	178	chr15	79908931	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	3	-8.4863
chr4	97421269	97421285	lincRNA	Gm12676	exon	ENSMUSG00000085710	ProperStrand	2	chr16	23108007	23108034	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	1	-16.4710
chr10	111715150	111715166	protein_coding	Kcnc2	intron	ENSMUSG00000035681	NonProperStrand	5	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-14.0925
chr12	88640531	88640548	protein_coding	Ism2	exon	ENSMUSG00000050671	ProperStrand	12	chr6	71832550	71832605	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-8.8530
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr1	63161334	63161350	lincRNA	Gm11602	intron	ENSMUSG00000084799	ProperStrand	22	1	-9.8192
chr17	24562047	24562137	protein_coding	Rnps1	utr3	ENSMUSG00000034681	ProperStrand	40	chr16	23111708	23111788	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.5776
chr13	11893532	11894083	protein_coding	Ryr2	exon	ENSMUSG00000021313	NonProperStrand	15	chr19	44188377	44188477	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	1	-10.6053
chr12	33638595	33638614	lincRNA	4933406C10Rik	exon	ENSMUSG00000086543	ProperStrand	52	chr4	131908357	131908411	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.6297
chr4	58833033	58865995	protein_coding	AI314180	exon	ENSMUSG00000050812	ProperStrand	19	chr11	97642952	97643079	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	6	-inf
chr11	97317774	97317790	protein_coding	Arhgap23	exon	ENSMUSG00000049807	ProperStrand	80	chr15	34370545	34370644	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	8	-inf
chr2	153502907	153502971	protein_coding	Dnmt3b	exon	ENSMUSG00000027478	ProperStrand	19	chr11	97355490	97355518	protein_coding	4933428G20Rik	intron	ENSMUSG00000047988	ProperStrand	2	1	-inf
chr8	72337846	72337947	protein_coding	Gmip	exon	ENSMUSG00000036246	ProperStrand	102	chr10	30530977	30531020	tRNA	tRNA81-GluCTC	.	1782701	ProperStrand	154	1	-10.3557
chr5	148082282	148082300	protein_coding	Pdx1	intron	ENSMUSG00000029644	ProperStrand	2	chr9	40762540	40762559	protein_coding	4931429I11Rik	intron	ENSMUSG00000032023	NonProperStrand	49	1	-inf
chr13	49005630	49005658	protein_coding	Fam120a	exon	ENSMUSG00000038014	ProperStrand	76	chr4	131908236	131908346	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-3.4498
chr2	76581636	76581695	protein_coding	Ttn	exon	ENSMUSG00000051747	ProperStrand	66	chr1	162966007	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-3.4278
chr3	85941943	85942405	protein_coding	Rps3a	exon	ENSMUSG00000028081	ProperStrand	177	chr5	74489594	74489674	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	2	-3.4399
chr15	31522635	31522682	protein_coding	Cct5	exon	ENSMUSG00000022234	ProperStrand	116	chr5	121655015	121655127	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.5638
chr18	68007157	68009796	protein_coding	Cep192	exon	ENSMUSG00000024542	ProperStrand	59	chr15	79908930	79908957	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-5.5054
chr1	71688582	71688641	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr17	35089181	35089210	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-0.8392
chr17	25982581	25982597	protein_coding	Wdr90	exon	ENSMUSG00000073434	ProperStrand	91	chr11	106362638	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-6.5779
chr8	3642156	3642172	protein_coding	Stxbp2	intron	ENSMUSG00000004626	NonProperStrand	73	chr7	35013996	35014327	protein_coding	Gpi1	exon	ENSMUSG00000036427	ProperStrand	288	1	-9.7754
chr19	4618151	4618251	protein_coding	Pcx	exon	ENSMUSG00000024892	ProperStrand	70	chr9	15118333	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.1858
chr14	119311824	119311924	protein_coding	Dzip1	intron	ENSMUSG00000042156	ProperStrand	7	chr18	73693165	73693182	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-9.9039
chr19	60913728	60913745	protein_coding-noncoding	Sfxn4	utr3	ENSMUSG00000063698	NonProperStrand	2	chr17	24665449	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-12.3390
chr12	16902473	16902490	protein_coding	Rock2	intron	ENSMUSG00000020580	ProperStrand	27	chr19	8963035	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-9.2148
chr5	93473404	93473421	protein_coding	Sowahb	exon	ENSMUSG00000045314	ProperStrand	16	chr1	162966812	162966829	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-8.9191
chr12	57429500	57429600	protein_coding	Mbip	utr3	ENSMUSG00000021028	ProperStrand	15	chr18	35714211	35714270	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-6.1300
chr1	184245345	184245361	protein_coding	Fbxo28	utr3	ENSMUSG00000047539	ProperStrand	27	chr16	23111735	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.2801
chr5	45253818	45253834	LTR	MLT1D	MaLR	chr5MLT1D45253615	ProperStrand	26	chr2	130102054	130102102	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-7.0135
chr4	87677797	87677819	protein_coding	Mllt3	intron	ENSMUSG00000028496	NonProperStrand	10	chr2	158182253	158182278	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-8.6074
chr1	10023387	10024122	protein_coding	Cops5	exon	ENSMUSG00000025917	ProperStrand	11	chr6	131330344	131330425	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	ProperStrand	408	1	-12.9367
chr9	58703523	58703540	protein_coding	Hcn4	exon	ENSMUSG00000032338	NonProperStrand	19	chr14	46124328	46124398	protein_coding	Fermt2	exon	ENSMUSG00000037712	ProperStrand	23	1	-17.4393
chr9	15130707	15130825	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	chr18	75161533	75161580	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	13	-18.7806
chr2	62141921	62141938	protein_coding	Slc4a10	exon	ENSMUSG00000026904	NonProperStrand	4	chr5	130300440	130300553	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-13.1528
chr8	13165879	13167159	protein_coding	Lamp1	exon	ENSMUSG00000031447	ProperStrand	92	chr9	120039587	120039667	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.5608
chr4	155498171	155499545	protein_coding-noncoding	9430015G10Rik	utr5	ENSMUSG00000059939	ProperStrand	3	chr4	155498109	155499583	protein_coding	9430015G10Rik	exon	ENSMUSG00000059939	ProperStrand	17	1	-inf
chr7	13516174	13516191	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr17	35089180	35089257	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-1.3795
chr5	3693225	3693241	protein_coding	Ankib1	exon	ENSMUSG00000040351	NonProperStrand	98	chr10	23505152	23505270	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-2.3079
chr5	68136853	68138533	protein_coding	Atp8a1	exon	ENSMUSG00000037685	ProperStrand	20	chr9	120038614	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-8.4791
chr15	97207185	97207253	protein_coding	Fam113b	intron	ENSMUSG00000044250	ProperStrand	10	chr18	35714168	35714258	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-6.9619
chr14	64114848	64114885	protein_coding	Tdh	exon	ENSMUSG00000021953	ProperStrand	67	chr16	38158134	38158210	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	7	-20.0000
chr15	102986178	102986195	protein_coding	Smug1	exon	ENSMUSG00000036061	NonProperStrand	7	chr2	26493383	26493500	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-8.0386
chr10	23506669	23506802	protein_coding	Rps12	exon	ENSMUSG00000061983	ProperStrand	309	chr9	64143736	64143873	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	6	-inf
chr4	147237200	147237217	protein_coding	Miip	exon	ENSMUSG00000029022	ProperStrand	3	chr7	117189863	117189920	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-12.5479
chr18	35787712	35787807	SINE	RSINE1	B4	chr18RSINE135787731	ProperStrand	1	chr19	8798764	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-inf
chr10	74980855	74982143	protein_coding	Snrpd3	utr5	ENSMUSG00000020180	ProperStrand	1	chr1	162965980	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-inf
chr9	61907544	61907634	protein_coding	Glce	utr3	ENSMUSG00000032252	ProperStrand	15	chr10	23505150	23505204	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.5481
chr7	151567693	151567783	antisense	Gm14372	.	ENSMUSG00000085745	ProperStrand	3	chr7	129470603	129470693	protein_coding	Prkcb	intron	ENSMUSG00000052889	NonProperStrand	16	1	-inf
chr15	78912077	78912333	protein_coding	Eif3l	exon	ENSMUSG00000033047	ProperStrand	81	chr17	69732682	69732700	protein_coding	Zfp161	utr5	ENSMUSG00000049672	ProperStrand	15	1	-15.5339
chr19	5801000	5801042	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr6	91839620	91839637	protein_coding	C130022K22Rik	intron	ENSMUSG00000034083	ProperStrand	12	1	-10.8161
chr8	59992216	59992797	protein_coding	Hmgb2	exon	ENSMUSG00000054717	ProperStrand	184	chr8	86904374	86904464	snoRNA	ENSMUSG00000064392_SNORA9	.	ENSMUSG00000064392	ProperStrand	2	1	-18.8297
chr7	4745158	4745676	protein_coding	Rpl28	exon	ENSMUSG00000030432	ProperStrand	220	chr19	8963129	8963183	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	8	-8.4819
chr12	81272762	81272862	protein_coding	Actn1	exon	ENSMUSG00000015143	ProperStrand	128	chr4	116828265	116828282	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	1	-8.8402
chr6	119887553	119887653	protein_coding	Wnk1	exon	ENSMUSG00000045962	ProperStrand	221	chr2	91436288	91436336	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-4.9377
chr2	172825857	172825875	protein_coding	Rae1	utr5	ENSMUSG00000027509	NonProperStrand	44	chr5	136614841	136615335	protein_coding	Alkbh4	utr5	ENSMUSG00000039754	ProperStrand	40	1	-14.7624
chr3	90056615	90056701	protein_coding	Slc39a1	utr3	ENSMUSG00000052310	ProperStrand	6	chr17	24857719	24857809	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-6.7526
chr9	120481934	120483444	protein_coding	Rpl14	exon	ENSMUSG00000025794	ProperStrand	123	chr4	131908686	131908751	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-1.7025
chr9	19462119	19462467	LINE	L1Md_A	L1	chr9L1Md_A19461964	NonProperStrand	28	chr8	13417100	13417221	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	3	-17.6614
chr9	108404428	108404518	protein_coding	Usp19	utr3	ENSMUSG00000006676	ProperStrand	57	chr11	6520342	6520422	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	1	-7.8198
chr17	12912705	12912795	protein_coding	Igf2r	exon	ENSMUSG00000023830	ProperStrand	151	chrX	34622944	34623024	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-1.6273
chr13	6574113	6574129	protein_coding	Pitrm1	intron	ENSMUSG00000021193	NonProperStrand	8	chr10	127521127	127521367	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	1	-12.8007
chr7	16786894	16786941	protein_coding	Dhx34	intron	ENSMUSG00000006019	ProperStrand	11	chr14	52829460	52829563	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-11.6607
chr8	64000678	64000768	protein_coding	Palld	intron	ENSMUSG00000058056	ProperStrand	39	chr16	23111690	23111770	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.6215
chr7	134671388	134671517	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	chr8	73419657	73419773	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	10	-4.2551
chr9	81949791	81949813	protein_coding	Mei4	intron	ENSMUSG00000043289	NonProperStrand	42	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-8.4420
chr7	24779190	24779213	SINE	ID_B1	B4	chr7ID_B124779183	NonProperStrand	54	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-7.1341
chr15	68012619	68012635	protein_coding	Zfat	exon	ENSMUSG00000022335	NonProperStrand	25	chr4	131908809	131908884	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-4.6061
chr5	150550975	150550992	protein_coding	B3galtl	intron	ENSMUSG00000051950	NonProperStrand	1	chr1	162968441	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-inf
chr2	101518796	101518896	protein_coding	Traf6	intron	ENSMUSG00000027164	NonProperStrand	1	chr16	11144327	11144396	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	1	-inf
chr2	121061802	121061829	protein_coding	Trp53bp1	exon	ENSMUSG00000043909	ProperStrand	45	chr15	73559007	73559023	protein_coding	Ptp4a3	intron	ENSMUSG00000059895	ProperStrand	45	1	-14.4730
chr18	38421732	38421749	protein_coding	0610009O20Rik	utr3	ENSMUSG00000024442	ProperStrand	25	chr7	116663712	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.1077
chr4	57421675	57421765	LTR	MER77	ERVL	chr4MER7757421673	NonProperStrand	1	chr4	57421450	57421540	LTR	RMER4B	ERVK	chr4RMER4B57421021	ProperStrand	1	1	-inf
chr15	81110991	81111009	SINE	ID4	ID	chr15ID481110956	ProperStrand	272	mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	1	-3.0442
chr10	127428422	127428438	protein_coding	Hsd17b6	exon	ENSMUSG00000025396	NonProperStrand	68	chr9	120038021	120038056	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-4.4660
chr7	150429747	150429763	protein_coding	Kcnq1	intron	ENSMUSG00000009545	NonProperStrand	133	chr1	162965531	162965559	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.9129
chr12	85540391	85540408	protein_coding	C130039O16Rik	intron	ENSMUSG00000042507	ProperStrand	75	chr4	153333875	153333892	protein_coding	A430005L14Rik	exon	ENSMUSG00000047613	NonProperStrand	17	1	-15.4273
chr6	137697799	137697889	protein_coding-noncoding	Strap	utr5	ENSMUSG00000030224	ProperStrand	1	chr6	137697681	137697761	protein_coding	Strap	intron	ENSMUSG00000030224	ProperStrand	27	1	-inf
chr5	151917767	151917857	protein_coding	Stard13	intron	ENSMUSG00000016128	ProperStrand	11	chr1	176736045	176736125	protein_coding	Fmn2	intron	ENSMUSG00000028354	ProperStrand	53	1	-17.0281
chr4	155540190	155553541	protein_coding	Agrn	exon	ENSMUSG00000041936	ProperStrand	175	chr16	23110828	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	28	-19.6872
chr7	17005603	17005628	protein_coding	Zc3h4	exon	ENSMUSG00000059273	ProperStrand	95	chr5	130300465	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.7589
chr4	117558946	117558963	protein_coding	Atp6v0b	exon	ENSMUSG00000033379	NonProperStrand	5	chr16	23110874	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-7.3377
chr15	34370564	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	chr5	125885971	125886011	tRNA	tRNA1316-AspGTC	.	801676	ProperStrand	8	2	-12.2803
chr4	62740897	62740928	protein_coding	Zfp618	exon	ENSMUSG00000028358	ProperStrand	8	chr7	148634715	148634840	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-8.0136
chr7	146068415	146074002	protein_coding	Ppp2r2d	exon	ENSMUSG00000041769	NonProperStrand	7	chr4	131908357	131908444	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-8.9603
chr12	110919730	110919764	snoRNA	ENSMUSG00000065022_AF357341	.	ENSMUSG00000065022	ProperStrand	7	chr4	131908236	131908289	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-5.3201
chr11	103226794	103226862	protein_coding	Plekhm1	utr3	ENSMUSG00000034247	ProperStrand	23	chr16	23111447	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-7.3487
chr3	104460594	104460642	protein_coding	Slc16a1	utr3	ENSMUSG00000032902	ProperStrand	48	chr4	131865869	131865904	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.1244
chr5	54502248	54502322	protein_coding	Stim2	exon	ENSMUSG00000039156	ProperStrand	212	chr3	85942712	85942776	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	1	-7.2004
chr5	115939536	115939560	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr13	49779667	49779802	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-1.9463
chr17	4082233	4082289	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr12	60774056	60774107	snoRNA	ENSMUSG00000077603_SNORA3	.	ENSMUSG00000077603	ProperStrand	185	1	-7.7153
chr17	39985206	39985763	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr12	55797769	55797880	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	5	-6.3095
chr1	59539683	59539700	protein_coding	Fzd7	utr5	ENSMUSG00000041075	ProperStrand	373	chr6	115758042	115758119	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-2.1253
chrX	135771752	135771769	protein_coding	Mum1l1	utr3	ENSMUSG00000042515	ProperStrand	21	chr11	69481335	69481433	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.1963
chr19	5796358	5796406	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr14	76247912	76247972	protein_coding	Tpt1	utr3	ENSMUSG00000060126	ProperStrand	236	1	-4.8573
chrX	148326373	148326465	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	chr17	24665447	24665487	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	5	-7.2081
chrX	91785224	91785324	protein_coding	Maged1	exon	ENSMUSG00000025151	ProperStrand	43	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	4	-inf
chr18	35102297	35102342	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	chr12	106269284	106269445	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	22	-17.5255
chr7	3413816	3413896	protein_coding	Cacng8	intron	ENSMUSG00000053395	ProperStrand	3	chr7	29136540	29136630	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-8.4253
chr5	130295414	130295492	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	chr8	112363232	112363274	snoRNA	ENSMUSG00000077549_Snord71	.	ENSMUSG00000077549	ProperStrand	196	2	-5.2168
chr12	79985826	79985926	protein_coding	Eif2s1	utr3	ENSMUSG00000021116	ProperStrand	11	chr9	15119722	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.8656
chr14	14137566	14137584	protein_coding	Synpr	intron	ENSMUSG00000056296	ProperStrand	4	chr8	73419673	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	NonProperStrand	53	1	-19.2405
chrX	71482580	71482642	protein_coding	Flna	intron	ENSMUSG00000031328	ProperStrand	134	chr9	15118332	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-2.0684
chr19	32464589	32464605	lincRNA	2700046G09Rik	exon	ENSMUSG00000024893	NonProperStrand	13	chr9	78327840	78327890	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-9.4244
chr17	84769655	84769677	protein_coding	Thada	intron	ENSMUSG00000024251	ProperStrand	47	chr11	6428060	6428154	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-6.1823
chr17	39985390	39985539	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr5	108336372	108336490	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	6	-1.2764
chr9	103092234	103092299	protein_coding	Srprb	utr3	ENSMUSG00000032553	ProperStrand	11	chr11	97642984	97643074	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-5.6855
chr8	4267337	4267649	protein_coding	Timm44	exon	ENSMUSG00000002949	ProperStrand	63	chr2	37255578	37255616	snoRNA	ENSMUSG00000077756_Snord90	.	ENSMUSG00000077756	ProperStrand	167	1	-11.1613
chr16	35404154	35407794	protein_coding	Pdia5	exon	ENSMUSG00000022844	ProperStrand	26	chr4	131865895	131865975	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.1929
chr17	45570498	45570588	protein_coding	Cdc5l	utr5	ENSMUSG00000023932	ProperStrand	59	chr5	130300435	130300519	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	9	-21.1594
chrX	99383315	99383687	protein_coding	Rps4x	exon	ENSMUSG00000031320	ProperStrand	139	chr15	79913288	79913338	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.1201
chr5	115939543	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr7	51505507	51505591	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	11	-inf
chr11	4970344	4970370	protein_coding	Ewsr1	exon	ENSMUSG00000009079	ProperStrand	248	chr9	120482739	120482886	protein_coding	Rpl14	exon	ENSMUSG00000025794	ProperStrand	123	2	-14.3096
chr2	90235291	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	26493364	26493491	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	21	-0.8831
chr2	126584649	126584749	protein_coding	Usp8	utr3	ENSMUSG00000027363	ProperStrand	40	chr19	8798502	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-6.0069
chr5	74489202	74489282	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr13	64001008	64001098	protein_coding	0610007P08Rik	utr3	ENSMUSG00000021470	ProperStrand	26	2	-11.7285
chr9	108108437	108108454	protein_coding	Dag1	utr3	ENSMUSG00000039952	ProperStrand	54	chr10	90581034	90581118	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	2	-8.2666
chr5	89079053	89079088	protein_coding	Rufy3	utr3	ENSMUSG00000029291	ProperStrand	10	chr9	104025683	104025701	protein_coding	Ccrl1	intron	ENSMUSG00000079355	ProperStrand	10	1	-20.3924
chr4	150955886	150955949	protein_coding	Camta1	intron	ENSMUSG00000014592	ProperStrand	170	chr8	113345386	113345476	protein_coding	Sf3b3	exon	ENSMUSG00000033732	ProperStrand	181	1	-9.0112
chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	chr8	32260368	32260422	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	2	-1.9676
chr3	107921316	107926499	protein_coding	Gnai3	exon	ENSMUSG00000000001	ProperStrand	48	chr19	8799067	8799093	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	6	-20.6385
chr17	26098990	26099624	protein_coding	Solh	exon	ENSMUSG00000037326	ProperStrand	53	chr14	119973336	119973353	protein_coding	Hs6st3	intron	ENSMUSG00000053465	NonProperStrand	134	1	-11.9500
chr15	79617583	79617645	protein_coding	Cbx6	utr3	ENSMUSG00000089715	ProperStrand	16	chr15	79908929	79908953	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	2	-13.0228
chr10	90460079	90462428	protein_coding	Apaf1	exon	ENSMUSG00000019979	ProperStrand	27	chr17	57468235	57468252	protein_coding	Vav1	utr3	ENSMUSG00000034116	ProperStrand	5	1	-19.7151
chr1	183083923	183086022	protein_coding	Cnih4	exon	ENSMUSG00000062169	ProperStrand	5	chr9	15119723	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-17.9427
chr2	121949511	121949527	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	chr19	8799847	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-2.2092
chr6	127415403	127415503	protein_coding	Parp11	intron	ENSMUSG00000037997	ProperStrand	5	chr5	130300521	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-7.4021
chr2	76576266	76579804	protein_coding	Ttn	exon	ENSMUSG00000051747	ProperStrand	66	chr4	131908298	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-3.9052
chr12	82881803	82881820	protein_coding	Map3k9	exon	ENSMUSG00000042724	ProperStrand	92	chrX	84483697	84483718	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-7.3965
chr10	80645094	80645179	protein_coding	Eef2	utr3	ENSMUSG00000034994	ProperStrand	2244	chr15	74539698	74539715	protein_coding	4933427E11Rik	exon	ENSMUSG00000044276	ProperStrand	1	1	-inf
chr9	118333374	118333474	LINE	L2b	L2	chr9L2b118333300	NonProperStrand	1	chr11	58949235	58949251	protein_coding	Obscn	exon	ENSMUSG00000061462	ProperStrand	81	1	-inf
chrX	123170379	123170405	LINE	Lx	L1	chrXLx123169992	NonProperStrand	1	chr1	87983863	87983951	snoRNA	ENSMUSG00000077274_SNORA26	.	ENSMUSG00000077274	ProperStrand	361	1	-inf
chr14	25314654	25315018	protein_coding	Rps24	utr3	ENSMUSG00000025290	ProperStrand	110	chr14	21182546	21182563	protein_coding	Fam149b	exon	ENSMUSG00000039599	NonProperStrand	3	1	-18.6764
chr15	73584192	73585732	protein_coding	Ptp4a3	exon	ENSMUSG00000059895	ProperStrand	45	chr3	95980363	95980410	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	3	-16.6812
chr15	81623240	81623330	protein_coding	Zc3h7b	exon	ENSMUSG00000022390	ProperStrand	35	chr18	74938238	74938318	snoRNA	ENSMUSG00000089235_SCARNA17	.	ENSMUSG00000089235	ProperStrand	1128	1	-8.5335
chr2	164251222	164251250	protein_coding	Sdc4	utr3	ENSMUSG00000017009	ProperStrand	177	chr12	17552972	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	2	-5.2714
chr11	116711560	116711626	protein_coding	Srsf2	utr3	ENSMUSG00000034120	ProperStrand	132	chr2	22444791	22444814	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	3	-14.2115
chr19	50339951	50339968	protein_coding	Sorcs1	intron	ENSMUSG00000043531	ProperStrand	23	chr7	117189945	117190004	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-5.1578
chr4	43505717	43505797	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr7	30631792	30631882	protein_coding-noncoding	Zfp940	utr3	ENSMUSG00000050855	ProperStrand	1	1	-inf
chr15	99610971	99611061	protein_coding	Lima1	exon	ENSMUSG00000023022	ProperStrand	159	chr19	8800374	8800454	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-1.8511
chr9	15130707	15130755	snoRNA	ENSMUSG00000077506_Scarna9	.	ENSMUSG00000077506	ProperStrand	148	chr8	73419663	73419763	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	5	-8.5622
chrX	70237450	70237472	miRNA	Mir2137	.	ENSMUSG00000089357	ProperStrand	50	chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	1	-8.3395
chr17	31607668	31607700	protein_coding	Pde9a	exon	ENSMUSG00000041119	ProperStrand	16	chr9	120039533	120039595	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-5.8660
chr13	55521829	55522010	protein_coding	F12	exon	ENSMUSG00000021492	ProperStrand	1	chr3	68889165	68889223	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-inf
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr4	131908686	131908896	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	35	-5.1961
chr10	116498397	116499172	protein_coding	Cct2	exon	ENSMUSG00000034024	ProperStrand	100	chr4	131908762	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-1.3124
chr3	54976482	54976499	protein_coding	A730037C10Rik	utr3	ENSMUSG00000048655	ProperStrand	2	chr11	69481341	69481431	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-10.4764
chr11	83706944	83707034	protein_coding	Hnf1b	exon	ENSMUSG00000020679	ProperStrand	2	chr7	125634452	125634532	protein_coding	Itpripl2	exon	ENSMUSG00000073858	ProperStrand	1	1	-inf
chr9	108453826	108453908	protein_coding	Qrich1	intron	ENSMUSG00000006673	ProperStrand	30	chr2	121949510	121949526	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	3	-20.0299
chr1	30179646	30179726	LTR	ORR1A2	MaLR	chr1ORR1A230179584	ProperStrand	1	chr11	51227247	51227337	protein_coding	Col23a1	intron	ENSMUSG00000063564	NonProperStrand	8	1	-inf
chr18	10151070	10151139	snRNA	ENSMUSG00000065941_U1	.	ENSMUSG00000065941	ProperStrand	47	chr4	131908692	131908792	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.5727
chr4	154624251	154624323	protein_coding	2610002J02Rik	utr5	ENSMUSG00000073684	ProperStrand	18	chr7	116664811	116664901	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-11.5299
chr8	87221434	87221564	protein_coding	Trmt1	exon	ENSMUSG00000001909	ProperStrand	88	chr7	119934467	119934484	protein_coding	Tead1	intron	ENSMUSG00000055320	ProperStrand	217	1	-9.9659
chr2	165899927	165899968	protein_coding	Sulf2	utr3	ENSMUSG00000006800	ProperStrand	171	chr3	141232708	141232726	protein_coding	Unc5c	intron	ENSMUSG00000059921	NonProperStrand	19	1	-13.5455
chr13	8756715	8766308	protein_coding	Adarb2	utr3	ENSMUSG00000052551	ProperStrand	292	chr7	116663640	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-1.6135
chr3	122996554	122996654	protein_coding	Sec24d	exon	ENSMUSG00000039234	ProperStrand	22	chr16	23110491	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.2978
chr15	12767250	12824445	protein_coding	Drosha	intron	ENSMUSG00000022191	ProperStrand	163	chr3	123210902	123210986	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	11	-15.6394
chr12	112215257	112215273	protein_coding	Ankrd9	exon	ENSMUSG00000037904	NonProperStrand	35	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.6607
chr10	3308860	3308879	protein_coding	Oprm1	utr3	ENSMUSG00000000766	ProperStrand	18	chr4	131908815	131908896	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.1942
chr11	95820895	95820930	protein_coding	Igf2bp1	utr3	ENSMUSG00000013415	ProperStrand	140	chr8	129468746	129468831	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-2.8533
chr10	41931171	41931195	protein_coding	Foxo3	intron	ENSMUSG00000048756	NonProperStrand	4	chr9	120039596	120039666	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-14.5258
chr5	115939534	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr2	32818799	32818888	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-0.8494
chr4	106031626	106031758	protein_coding	Usp24	exon	ENSMUSG00000028514	ProperStrand	74	chrX	84483736	84483756	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	8	-inf
chr17	84665626	84665670	protein_coding	Thada	intron	ENSMUSG00000024251	ProperStrand	47	chr13	54723202	54723218	protein_coding	Faf2	exon	ENSMUSG00000025873	ProperStrand	90	1	-12.9928
chrX	96662595	96662675	protein_coding	Pja1	exon	ENSMUSG00000034403	ProperStrand	6	chr16	23110857	23110947	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-6.6757
chr16	84857255	84857325	protein_coding	Gabpa	intron	ENSMUSG00000008976	NonProperStrand	4	chr4	43505763	43505863	protein_coding	Ccdc107	intron	ENSMUSG00000028461	ProperStrand	69	1	-18.5572
chr4	131908251	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	chr16	38158093	38158227	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	11	-1.3284
chr4	128757696	128759993	protein_coding	Rnf19b	exon	ENSMUSG00000028793	ProperStrand	7	chrX	152009278	152009294	protein_coding	Ptchd1	exon	ENSMUSG00000041552	NonProperStrand	294	1	-14.5525
chr6	92118939	92118955	protein_coding	Nr2c2	utr3	ENSMUSG00000005893	NonProperStrand	4	chr13	96100554	96100619	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	NonProperStrand	8	1	-19.3161
chr16	57391627	57391707	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr17	24857762	24857852	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	NonProperStrand	27	1	-11.9204
chr14	31384228	31386769	protein_coding	Tkt	exon	ENSMUSG00000021957	ProperStrand	160	chr3	123210894	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-2.4778
chr3	103134102	103134161	protein_coding	Trim33	exon	ENSMUSG00000033014	ProperStrand	55	chr4	131865464	131865516	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	2	-6.9826
chr14	32899117	32899191	protein_coding	Oxnad1	utr5	ENSMUSG00000021906	ProperStrand	11	chr18	46769666	46769718	protein_coding	Eif1a	utr3	ENSMUSG00000057561	ProperStrand	44	7	-inf
chr14	33005038	33005209	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	chr11	106362587	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	4	-0.9985
chr19	5940768	5940858	protein_coding	Pola2	utr3	ENSMUSG00000024833	ProperStrand	29	chr9	120038467	120038528	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.3936
chr8	113261840	113261930	protein_coding	Mtss1l	exon	ENSMUSG00000033763	ProperStrand	12	chr16	23110911	23110991	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-4.4633
chr16	16983555	16983645	protein_coding	Mapk1	utr5	ENSMUSG00000063358	ProperStrand	67	chr5	130295433	130295513	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-5.0342
chr1	89346238	89346304	protein_coding	Gigyf2	utr3	ENSMUSG00000048000	ProperStrand	128	chr10	23505152	23505213	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-2.5170
chr6	113093664	113093691	protein_coding	Setd5	exon	ENSMUSG00000034269	ProperStrand	162	chr8	87525221	87525238	protein_coding	Hook2	exon	ENSMUSG00000052566	ProperStrand	204	1	-8.8688
chr2	131111344	131111401	protein_coding	Pank2	intron	ENSMUSG00000037514	ProperStrand	14	chr4	131865929	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.3681
chr9	108839159	108844129	protein_coding	Uqcrc1	exon	ENSMUSG00000025651	ProperStrand	43	chr17	44872633	44872649	protein_coding	Runx2	utr5	ENSMUSG00000039153	NonProperStrand	13	1	-17.1946
chr18	82662186	82662202	protein_coding	Mbp	intron	ENSMUSG00000041607	NonProperStrand	185	chr9	44142835	44142858	protein_coding	H2afx	utr5	ENSMUSG00000049932	ProperStrand	137	1	-9.3986
chr9	62644073	62644168	protein_coding	Fem1b	exon	ENSMUSG00000032244	ProperStrand	111	chr5	130300528	130300555	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-2.8491
chr11	109081339	109081355	SINE	B3A	B2	chr11B3A109081325	ProperStrand	5	chr8	125416570	125416595	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	1	-14.7781
chr6	87769189	87769558	protein_coding	Isy1	exon	ENSMUSG00000030056	ProperStrand	172	chr7	133991941	133991957	protein_coding	Doc2a	utr5	ENSMUSG00000052301	NonProperStrand	4	1	-16.8278
chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr7	52381719	52381803	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	7	-11.3823
chr19	47184085	47184165	protein_coding	Pdcd11	exon	ENSMUSG00000025047	ProperStrand	137	chr10	110918548	110918638	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	NonProperStrand	10	1	-15.3227
chr6	125112980	125113207	protein_coding	Gapdh	exon	ENSMUSG00000057666	ProperStrand	356	chr10	110918549	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-1.4739
chr5	121895056	121895129	protein_coding	Erp29	utr3	ENSMUSG00000029616	ProperStrand	33	chr19	8798754	8798813	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	3	-13.8147
chr5	136223361	136223377	protein_coding	Styxl1	utr3	ENSMUSG00000019178	ProperStrand	14	chr5	67389993	67390010	protein_coding	Limch1	exon	ENSMUSG00000037736	ProperStrand	20	1	-18.9819
chr19	8799826	8799899	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	9	-1.5346
chr6	7628042	7630106	protein_coding	Asns	exon	ENSMUSG00000029752	ProperStrand	59	chr19	8799835	8799897	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	2	-8.2164
chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	chr6	30332551	30332593	protein_coding	Zc3hc1	exon	ENSMUSG00000039130	ProperStrand	20	1	-11.6710
chr9	56266647	56266665	protein_coding	Hmg20a	utr5	ENSMUSG00000032329	ProperStrand	87	chr4	131865855	131865930	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.2262
chr4	140674500	140674590	protein_coding	D4Ertd22e	exon	ENSMUSG00000040842	ProperStrand	23	chr10	110918550	110918630	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-5.2814
chr5	74489543	74489603	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	2	-5.0107
chr17	24824507	24824597	protein_coding	Syngr3	exon	ENSMUSG00000007021	NonProperStrand	1	chr9	123037593	123037683	protein_coding	Exosc7	intron	ENSMUSG00000025785	NonProperStrand	1	1	-inf
chr14	48313579	48314460	protein_coding	Ktn1	exon	ENSMUSG00000021843	ProperStrand	64	chr15	98350144	98350197	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	2	-7.6940
chr4	122539675	122539900	protein_coding	Cap1	exon	ENSMUSG00000028656	ProperStrand	45	chr11	6428033	6428113	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-6.3078
chr8	74987982	74988013	protein_coding	Cherp	exon	ENSMUSG00000052488	ProperStrand	43	chr4	131908252	131908342	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.9253
chr5	3693225	3693241	protein_coding	Ankib1	exon	ENSMUSG00000040351	NonProperStrand	98	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.7100
chr5	68086687	68086704	protein_coding	Atp8a1	intron	ENSMUSG00000037685	NonProperStrand	4	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-11.4809
chr2	26493430	26493521	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr15	82958258	82958318	protein_coding	Poldip3	utr3	ENSMUSG00000041815	ProperStrand	57	1	-6.2959
chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	chr8	89237286	89237351	protein_coding	Lonp2	exon	ENSMUSG00000047866	ProperStrand	13	1	-12.9892
chr9	64143736	64143873	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	chr17	35087925	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	2	-1.3569
chrX	165695583	165695599	protein_coding	Arhgap6	exon	ENSMUSG00000031355	ProperStrand	74	chr15	79908957	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-5.0646
chr2	120352642	120352668	protein_coding	Zfp106	exon	ENSMUSG00000027288	ProperStrand	199	chr15	34370552	34370619	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-1.5265
chr7	20173958	20174129	protein_coding	Clasrp	exon	ENSMUSG00000061028	ProperStrand	11	chr5	74489620	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-7.1242
chr13	53073980	53073997	protein_coding	Nfil3	intron	ENSMUSG00000056749	NonProperStrand	66	chr1	89673561	89673607	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-3.0912
chr6	122657875	122661565	protein_coding	Nanog	exon	ENSMUSG00000012396	ProperStrand	66	chr16	23110911	23110964	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-2.0060
chr4	141697571	141697588	protein_coding	Kazn	exon	ENSMUSG00000040606	ProperStrand	123	chr4	131908794	131908884	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-2.6259
chr11	108204937	108204953	protein_coding	Prkca	exon	ENSMUSG00000050965	ProperStrand	48	chr6	115758062	115758119	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-5.9099
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr3	123210854	123210933	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	9	-4.2169
chr1	71341492	71341509	protein_coding	Abca12	exon	ENSMUSG00000050296	NonProperStrand	143	chr11	58768221	58768311	protein_coding	Hist3h2a	utr5	ENSMUSG00000078851	ProperStrand	67	1	-11.3476
chr11	50111832	50111922	protein_coding	Canx	intron	ENSMUSG00000020368	ProperStrand	296	chr11	69481340	69481420	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-0.7626
chrX	33607698	33607715	protein_coding	Dock11	exon	ENSMUSG00000031093	ProperStrand	42	chr9	120038548	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.6915
chr7	67123693	67123728	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	chr5	130300420	130300510	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-0.9745
chr18	77627155	77627171	protein_coding	Loxhd1	exon	ENSMUSG00000032818	NonProperStrand	5	chr7	116664869	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-12.3114
chr11	104218023	104218124	protein_coding	1700081L11Rik	exon	ENSMUSG00000018412	ProperStrand	73	chr11	62416633	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	4	-15.0226
chr16	6456240	6456257	Other	RMER1C	Other	chr16RMER1C6456169	ProperStrand	7	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-10.2562
chr17	57374810	57374886	protein_coding	Gpr108	intron	ENSMUSG00000005823	ProperStrand	15	chr11	69483136	69483193	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-5.0353
chr7	149050358	149050374	protein_coding	Muc5b	exon	ENSMUSG00000066108	ProperStrand	5	chr10	127521200	127521271	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	1	-13.9625
chr1	183853750	183853767	protein_coding	Enah	exon	ENSMUSG00000022995	NonProperStrand	33	chr5	74489618	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-4.9189
chr8	123682822	123682839	protein_coding	Gm20388	intron	ENSMUSG00000092329	NonProperStrand	203	chr1	88247814	88247835	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-2.8274
chr7	148634705	148634795	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	chr9	40611707	40611736	snoRNA	ENSMUSG00000075876_Snord14c	.	ENSMUSG00000075876	ProperStrand	104	7	-inf
chr9	67423900	67423990	LTR	ORR1E	MaLR	chr9ORR1E67423849	NonProperStrand	1	chr9	67423753	67423843	SINE	B3	B2	chr9B367423622	ProperStrand	1	1	-inf
chr19	45076560	45076603	protein_coding	Sema4g	utr3	ENSMUSG00000025207	ProperStrand	58	chr7	30660342	30660358	protein_coding	Zfp420	exon	ENSMUSG00000058402	NonProperStrand	8	1	-17.4872
chr10	82829580	82829646	protein_coding	D10Wsu102e	utr3	ENSMUSG00000020255	ProperStrand	42	chr6	24684480	24684497	protein_coding	Hyal6	exon	ENSMUSG00000029679	NonProperStrand	114	3	-23.3236
chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	chr13	49779667	49779742	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-2.6977
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr11	82258443	82258460	protein_coding	Tmem132e	exon	ENSMUSG00000020701	NonProperStrand	3	1	-14.1554
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr2	164796661	164796679	protein_coding	Slc12a5	intron	ENSMUSG00000017740	NonProperStrand	40	1	-6.7062
chr5	31117166	31117183	protein_coding	Mapre3	utr5	ENSMUSG00000029166	NonProperStrand	19	chr4	131908687	131908739	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.0948
chr5	117732792	117732889	protein_coding	Pebp1	utr3	ENSMUSG00000032959	ProperStrand	54	chr16	23111770	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.0726
chr15	83910624	83910647	protein_coding	Sult4a1	exon	ENSMUSG00000018865	ProperStrand	8	chr7	116663633	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-15.1552
chr17	46861595	46861611	protein_coding	Pex6	exon	ENSMUSG00000002763	ProperStrand	292	chr6	122678638	122678664	protein_coding	Slc2a3	utr3	ENSMUSG00000003153	ProperStrand	682	1	-5.3266
chr3	108230228	108230277	protein_coding	Sars	exon	ENSMUSG00000068739	ProperStrand	45	chr8	112363246	112363275	snoRNA	ENSMUSG00000077549_Snord71	.	ENSMUSG00000077549	ProperStrand	196	1	-11.5191
chr15	81457889	81458727	protein_coding	Ep300	exon	ENSMUSG00000055024	ProperStrand	118	chr15	34370544	34370634	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-2.3524
chr11	80041932	80041950	protein_coding	Rhot1	intron	ENSMUSG00000017686	ProperStrand	40	chr11	48614059	48615203	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	1	-10.6145
chr18	60937530	60938088	protein_coding	Rps14	exon	ENSMUSG00000024608	ProperStrand	154	chr11	116295415	116295502	protein_coding	Fam100b	utr5	ENSMUSG00000050628	ProperStrand	97	1	-10.4567
chr1	130078596	130090221	protein_coding	R3hdm1	exon	ENSMUSG00000056211	ProperStrand	43	chr16	23110828	23110979	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	7	-8.0387
chr4	145233064	145233164	pseudogene	Gm13231	.	ENSMUSG00000081885	ProperStrand	1	chr4	131866238	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-inf
chr9	110141712	110141772	protein_coding	Smarcc1	utr3	ENSMUSG00000032481	ProperStrand	108	chr12	67384878	67384902	protein_coding	Rpl10l	exon	ENSMUSG00000060499	ProperStrand	4	1	-17.7351
chr11	69266813	69266829	protein_coding	Dnahc2	exon	ENSMUSG00000005237	ProperStrand	95	chr7	52309977	52309993	protein_coding	Prrg2	exon	ENSMUSG00000007837	NonProperStrand	281	1	-9.2966
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	27649644	27649660	protein_coding	Grm4	intron	ENSMUSG00000063239	ProperStrand	147	1	-2.8129
chr16	17891616	17891680	protein_coding	Dgcr2	utr5	ENSMUSG00000003166	ProperStrand	45	chr17	35087926	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	3	-13.3650
chr17	35379664	35379699	protein_coding	Ddx39b	utr5	ENSMUSG00000019432	ProperStrand	119	chr19	8963086	8963182	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.2291
chr2	160191558	160191574	protein_coding	Mafb	exon	ENSMUSG00000074622	ProperStrand	31	chr18	75161534	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-8.5271
chr4	66133911	66133929	LINE	Lx5	L1	chr4Lx566133678	ProperStrand	15	chr8	32260369	32260431	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-7.3814
chr8	11627325	11627370	protein_coding	Ankrd10	intron	ENSMUSG00000031508	ProperStrand	32	chr8	14975966	14977557	protein_coding	Arhgef10	exon	ENSMUSG00000071176	ProperStrand	22	1	-16.6073
chr5	112184025	112184055	lincRNA	E130006D01Rik	intron	ENSMUSG00000085271	ProperStrand	2	chr7	129311263	129312092	protein_coding	Plk1	exon	ENSMUSG00000030867	ProperStrand	146	1	-inf
chr4	141030036	141033569	protein_coding	Spen	exon	ENSMUSG00000040761	ProperStrand	161	chr3	123210854	123210933	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-1.4689
chr11	21048328	21048367	protein_coding	Peli1	exon	ENSMUSG00000020134	ProperStrand	69	chr18	82773672	82773688	protein_coding	Zfp236	exon	ENSMUSG00000041258	NonProperStrand	117	1	-11.6907
chr18	85048944	85048960	protein_coding	Cyb5	exon	ENSMUSG00000024646	NonProperStrand	3	chr7	4691730	4691749	protein_coding	Suv420h2	utr5	ENSMUSG00000059851	NonProperStrand	70	1	-20.0448
chr11	79507568	79507658	protein_coding	Rab11fip4	utr3	ENSMUSG00000017639	ProperStrand	30	chr10	23505167	23505247	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.3011
chr2	129971015	129977015	protein_coding	Tgm6	exon	ENSMUSG00000027403	NonProperStrand	2	chr6	71832579	71832687	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-13.0331
chr9	35354379	35354408	protein_coding	Ddx25	exon	ENSMUSG00000032101	ProperStrand	2	chr2	26493364	26493485	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-11.0703
chr4	149023355	149023371	protein_coding	Pik3cd	utr3	ENSMUSG00000039936	NonProperStrand	17	chr8	86904388	86904467	snoRNA	ENSMUSG00000064392_SNORA9	.	ENSMUSG00000064392	ProperStrand	2	1	-inf
chr10	127520447	127525385	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr4	131865856	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	22	-12.4031
chr17	56575518	56577212	protein_coding	Ptprs	exon	ENSMUSG00000013236	ProperStrand	152	chr12	112779201	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-3.0438
chr11	68861809	68861858	protein_coding	Aurkb	exon	ENSMUSG00000020897	ProperStrand	11	chr5	151755616	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-11.1946
chr14	22594447	22594464	protein_coding	Samd8	exon	ENSMUSG00000021770	ProperStrand	25	chr1	95309069	95310097	protein_coding	Hdlbp	exon	ENSMUSG00000034088	ProperStrand	97	1	-14.1258
chr5	125934714	125934798	protein_coding	Bri3bp	exon	ENSMUSG00000037905	ProperStrand	43	chr7	117189864	117189954	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-6.8700
chr8	86782815	86784198	protein_coding	Ccdc130	exon	ENSMUSG00000004994	ProperStrand	29	chr11	84722944	84722961	protein_coding	Myo19	exon	ENSMUSG00000020527	ProperStrand	82	1	-14.1594
chr4	44025627	44025691	protein_coding	Clta	utr5	ENSMUSG00000028478	ProperStrand	59	chr16	23111419	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.2821
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	32500864	32503675	protein_coding	Stk10	exon	ENSMUSG00000020272	NonProperStrand	73	1	-4.0904
chr5	149140535	149140565	protein_coding	Slc7a1	utr3	ENSMUSG00000041313	ProperStrand	65	chr9	15119668	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.4918
chr11	68922008	68922593	protein_coding	Per1	exon	ENSMUSG00000020893	ProperStrand	46	chr7	118219693	118219740	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-4.6781
chr16	23111690	23111798	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	NonProperStrand	47	chr16	23110865	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	NonProperStrand	93	3	-inf
chr10	80809668	80809684	protein_coding	Hmg20b	exon	ENSMUSG00000020232	ProperStrand	157	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	3	-9.7442
chr19	30211013	30211621	protein_coding	Gldc	exon	ENSMUSG00000024827	ProperStrand	175	chr2	130103454	130103502	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-5.9438
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr6	121423179	121423195	protein_coding	Iqsec3	utr5	ENSMUSG00000040797	NonProperStrand	139	1	-7.0420
chr5	28720580	28720662	protein_coding	Rbm33	exon	ENSMUSG00000048271	ProperStrand	78	chr1	89673648	89673738	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-2.7945
chr14	52605698	52605783	protein_coding	Arhgef40	intron	ENSMUSG00000004562	ProperStrand	5	chr16	23110922	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr10	77863656	77864600	protein_coding	Rrp1	exon	ENSMUSG00000061032	ProperStrand	177	chr18	33954917	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-3.0737
chr18	89387605	89387621	protein_coding	Cd226	intron	ENSMUSG00000034028	ProperStrand	47	chr16	23111776	23111797	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.3023
chr10	60686592	60686634	protein_coding	Adamts14	intron	ENSMUSG00000059901	ProperStrand	17	chr4	131908235	131908277	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-6.1110
chr13	19684241	19684258	protein_coding	Epdr1	utr3	ENSMUSG00000002808	ProperStrand	46	chr7	119734188	119734205	protein_coding	Parva	utr3	ENSMUSG00000030770	NonProperStrand	5	1	-18.6318
chr4	99577397	99577413	protein_coding	Itgb3bp	intron	ENSMUSG00000028549	ProperStrand	55	chr9	120038553	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-5.4944
chr11	96652178	96652206	protein_coding	Cbx1	intron	ENSMUSG00000018666	ProperStrand	14	chr3	157729963	157729979	protein_coding	Lrrc40	utr3	ENSMUSG00000063052	ProperStrand	147	1	-14.4846
chr3	96132420	96132514	snRNA	ENSMUSG00000075978_U1	.	ENSMUSG00000075978	ProperStrand	132	chr9	15118522	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	1	-7.7663
chr10	98392907	98392939	protein_coding	Atp2b1	intron	ENSMUSG00000019943	ProperStrand	31	chrX	84483709	84483729	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-9.5782
chr7	52309977	52309993	protein_coding	Prrg2	exon	ENSMUSG00000007837	NonProperStrand	281	chr3	153574609	153574654	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	1	-6.6010
chr4	126703409	126703426	protein_coding	Sfpq	exon	ENSMUSG00000028820	ProperStrand	340	chr11	55296195	55296258	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-2.8993
chr2	179322379	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	1	-7.1001
chr5	23907915	23907931	protein_coding	Abcb8	exon	ENSMUSG00000028973	NonProperStrand	49	chr7	116663640	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.8648
chr5	24198726	24200551	protein_coding	Nub1	exon	ENSMUSG00000028954	ProperStrand	32	chr4	116827010	116827257	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	1	-11.6278
chr7	88529496	88529520	protein_coding	Cpeb1	intron	ENSMUSG00000025586	NonProperStrand	29	chr8	129468746	129468797	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-5.8296
chr2	32434023	32434040	protein_coding	Pip5kl1	exon	ENSMUSG00000046854	NonProperStrand	8	chr4	138919101	138919175	protein_coding	C230096C10Rik	exon	ENSMUSG00000078517	ProperStrand	69	2	-19.6380
chr13	55827470	55827539	protein_coding	Txndc15	utr3	ENSMUSG00000021497	ProperStrand	2	chr2	74585382	74585398	protein_coding	Hoxd3	utr3	ENSMUSG00000079277	ProperStrand	2	1	-inf
chr2	34027637	34027679	protein_coding	Pbx3	utr3	ENSMUSG00000038718	ProperStrand	8	chr16	23110894	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-12.0409
chr2	84902583	84902620	protein_coding	Tnks1bp1	exon	ENSMUSG00000033955	ProperStrand	23	chr11	97642952	97643004	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.2234
chrX	11635848	11635865	protein_coding	Bcor	exon	ENSMUSG00000040363	NonProperStrand	293	chr14	31827478	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-3.8746
chr11	5424280	5424339	protein_coding	Xbp1	exon	ENSMUSG00000020484	ProperStrand	16	chr1	32601051	32601067	protein_coding	Khdrbs2	intron	ENSMUSG00000026058	ProperStrand	10	1	-19.5488
chr12	105966606	105967340	protein_coding	Dicer1	exon	ENSMUSG00000041415	ProperStrand	61	chr8	98269959	98269981	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	2	-9.0178
chr7	134731424	134731440	protein_coding	Gm166	exon	ENSMUSG00000057176	ProperStrand	22	chr14	33005038	33005092	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-5.9434
chr8	119465257	119465291	protein_coding	Cenpn	utr3	ENSMUSG00000031756	ProperStrand	15	chrX	117423351	117423368	protein_coding	Pcdh11x	intron	ENSMUSG00000034755	ProperStrand	15	1	-19.0472
chr4	123413713	123413765	protein_coding	Akirin1	utr3	ENSMUSG00000023075	ProperStrand	13	chr7	116664826	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-12.9541
chr5	44142189	44142219	protein_coding	Fbxl5	exon	ENSMUSG00000039753	ProperStrand	18	chr14	76247754	76247793	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-6.5333
chr6	130429886	130429906	LINE	Lx4B	L1	chr6Lx4B130429283	ProperStrand	12	mmu-miR-6240	1	26	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	1	-9.1521
chr11	77524517	77524607	protein_coding	Nufip2	utr3	ENSMUSG00000037857	ProperStrand	36	chr10	110918554	110918634	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-4.4089
chr11	106662743	106662762	protein_coding	Ccdc45	intron	ENSMUSG00000018372	ProperStrand	17	chr9	15119286	15119394	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	2	-12.2693
chr7	54192501	54192527	protein_coding	Uevld	intron	ENSMUSG00000043262	ProperStrand	23	chr4	131865868	131865986	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-11.7128
chr7	125277304	125277368	protein_coding	Smg1	utr3	ENSMUSG00000030655	ProperStrand	70	chr18	35714196	35714286	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-3.1624
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr11	94098976	94098992	protein_coding	Wfikkn2	exon	ENSMUSG00000044177	ProperStrand	19	1	-11.7003
mmu-miR-6240	3	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr8	131248222	131248322	protein_coding	Itgb1	exon	ENSMUSG00000025809	ProperStrand	35	1	-6.9727
chr4	43575407	43575423	protein_coding-noncoding	Tln1	utr3	ENSMUSG00000028465	ProperStrand	1	chr7	52382012	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-inf
chr6	71896714	71896730	protein_coding	Polr1a	intron	ENSMUSG00000049553	NonProperStrand	25	chr4	131865381	131865440	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-5.6979
chr12	114375069	114375085	protein_coding	Mta1	utr3	ENSMUSG00000021144	NonProperStrand	11	chr15	77356785	77356801	protein_coding	Apol7c	exon	ENSMUSG00000044309	ProperStrand	197	1	-14.3987
chr6	30277023	30277040	lincRNA	1700095J07Rik	intron	ENSMUSG00000084861	NonProperStrand	4	chr9	105355915	105355957	protein_coding	Atp2c1	exon	ENSMUSG00000032570	ProperStrand	21	1	-19.5361
chr15	41620675	41620692	protein_coding	Oxr1	exon	ENSMUSG00000022307	ProperStrand	21	chr7	149170854	149171340	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	1	-13.3763
chr5	74489209	74489331	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chrX	12675709	12677581	protein_coding	Usp9x	exon	ENSMUSG00000031010	ProperStrand	174	12	-inf
chr4	116875160	116875250	snRNA	ENSMUSG00000070228_U5	.	ENSMUSG00000070228	ProperStrand	131	chr4	131865859	131865939	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.7252
chr11	116781589	116781618	protein_coding	Mgat5b	intron	ENSMUSG00000043857	ProperStrand	21	chr11	69483136	69483184	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-7.3452
chr6	46316493	46316513	protein_coding	Cntnap2	intron	ENSMUSG00000039419	NonProperStrand	283	chr6	71832577	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-2.7108
chr4	119292031	119292584	protein_coding	Foxj3	exon	ENSMUSG00000032998	ProperStrand	9	chr3	123210854	123210923	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.6210
chr9	57253860	57253877	SINE	B1_Mm	Alu	chr9B1_Mm57253847	ProperStrand	39	chr16	23110455	23110524	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.2225
chr5	66651465	66651481	protein_coding	Nsun7	utr5	ENSMUSG00000029206	NonProperStrand	73	chr4	130305550	130305606	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	1	-9.5158
chr17	87681989	87682007	lincRNA	4833418N02Rik	exon	ENSMUSG00000085287	NonProperStrand	1	chr11	120675902	120675950	protein_coding	Fasn	exon	ENSMUSG00000025153	ProperStrand	298	1	-inf
chr4	134969176	134969266	protein_coding	Rcan3	utr3	ENSMUSG00000059713	ProperStrand	12	chr11	97642998	97643078	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-5.5085
chr15	98350163	98350283	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	chr15	79908931	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	19	-9.8466
chr6	100196734	100196752	protein_coding	Rybp	intron	ENSMUSG00000072872	NonProperStrand	7	chr16	23110852	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-6.1472
chr7	147130107	147130164	protein_coding	Utf1	exon	ENSMUSG00000047751	ProperStrand	67	chr11	69481341	69481431	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.0022
chr1	20803055	20803135	protein_coding	Mcm3	exon	ENSMUSG00000041859	ProperStrand	142	chr17	35088957	35088996	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-4.2051
chr2	91751584	91751612	protein_coding	Ambra1	exon	ENSMUSG00000040506	ProperStrand	65	chr3	68889026	68889126	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-3.1122
chr5	121828827	121828843	protein_coding	Trafd1	exon	ENSMUSG00000042726	ProperStrand	81	chr7	28061791	28061807	protein_coding	Numbl	exon	ENSMUSG00000063160	NonProperStrand	9	1	-16.5737
chr17	47743912	47747917	protein_coding	Bysl	exon	ENSMUSG00000023988	ProperStrand	48	chr2	72931049	72931080	protein_coding	Ola1	utr3	ENSMUSG00000027108	ProperStrand	17	1	-16.3172
chr8	95505795	95505812	protein_coding	Slc6a2	exon	ENSMUSG00000055368	NonProperStrand	21	chr4	131908812	131908892	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.9128
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr12	106269284	106269557	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	26	-16.3923
chr17	36323033	36323049	protein_coding	H2-T3	utr3	ENSMUSG00000054128	NonProperStrand	25	chr4	131908236	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.8464
chr7	97342770	97342860	protein_coding	Picalm	intron	ENSMUSG00000039361	NonProperStrand	5	chr9	48299905	48299995	protein_coding	Rbm7	intron	ENSMUSG00000042396	ProperStrand	2	1	-inf
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr8	97394816	97394838	protein_coding	Dok4	utr5	ENSMUSG00000040631	ProperStrand	3	1	-13.3838
chr12	81745175	81745265	protein_coding	Erh	utr5	ENSMUSG00000021131	ProperStrand	20	chr12	81745303	81745393	protein_coding	Slc39a9	utr5	ENSMUSG00000048833	NonProperStrand	3	1	-inf
chr10	79373737	79373774	protein_coding	C030046I01Rik	utr3	ENSMUSG00000035781	ProperStrand	14	chr2	83693562	83693578	protein_coding	Fam171b	exon	ENSMUSG00000048388	NonProperStrand	175	1	-14.1278
chr6	125491049	125491129	LINE	Lx8	L1	chr6Lx8125491047	NonProperStrand	1	chr14	49139004	49139094	SINE	B3	B2	chr14B349139030	ProperStrand	1	1	-inf
chr19	4153597	4153794	protein_coding	Coro1b	exon	ENSMUSG00000024835	ProperStrand	13	chr10	110918549	110918666	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-10.5042
chr11	97639425	97641571	protein_coding	Rpl23	exon	ENSMUSG00000071415	ProperStrand	920	chr4	131865855	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	15	-2.1660
chr2	129025603	129025708	protein_coding	Slc20a1	exon	ENSMUSG00000027397	ProperStrand	81	chr10	110918634	110918673	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-2.9073
chr1	40043160	40043240	protein_coding	Map4k4	intron	ENSMUSG00000026074	ProperStrand	348	chr2	26494708	26494798	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	4	-3.0473
chr18	36961596	36961663	misc_RNA	Vault	.	ENSMUSG00000065145	ProperStrand	177	chr7	147129985	147130085	protein_coding	Utf1	exon	ENSMUSG00000047751	ProperStrand	67	1	-10.9208
chr10	70847009	70847025	protein_coding	Ipmk	utr3	ENSMUSG00000060733	NonProperStrand	6	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.7876
chr8	12757419	12757437	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr5	147394860	147394876	protein_coding	Gpr12	exon	ENSMUSG00000041468	NonProperStrand	20	1	-10.8158
chr13	3599492	3610037	protein_coding	BC016423	utr5	ENSMUSG00000033799	ProperStrand	15	chr4	131865381	131865461	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-6.7250
chr12	107023202	107023220	protein_coding	Papola	intron	ENSMUSG00000021111	ProperStrand	67	chr9	64024453	64024524	protein_coding	Rpl4	intron	ENSMUSG00000032399	ProperStrand	608	1	-8.4585
chr11	106410050	106410104	protein_coding	Tex2	exon	ENSMUSG00000040548	ProperStrand	24	chr19	8798742	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	2	-10.7128
chr11	5772739	5773031	protein_coding	Pold2	exon	ENSMUSG00000020471	ProperStrand	58	chr2	26494763	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.1681
chr4	117317843	117327276	protein_coding	Eri3	intron	ENSMUSG00000033423	ProperStrand	246	chr4	131865856	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	6	-3.3482
chr2	34668187	34668267	protein_coding-noncoding	Fbxw2	utr3	ENSMUSG00000035949	ProperStrand	6	chr11	106642664	106642693	protein_coding	Ddx5	utr3	ENSMUSG00000020719	ProperStrand	181	4	-19.9477
chr11	30008927	30008944	protein_coding	Spnb2	utr3	ENSMUSG00000020315	ProperStrand	103	chr9	110133837	110133967	protein_coding	Smarcc1	intron	ENSMUSG00000032481	ProperStrand	108	1	-11.0468
chr6	3794656	3794674	SINE	B4A	B4	chr6B4A3794525	NonProperStrand	26	chr2	79843543	79843559	protein_coding	Pde1a	intron	ENSMUSG00000059173	NonProperStrand	275	1	-11.9535
chr9	55393870	55393886	protein_coding	Isl2	utr3	ENSMUSG00000032318	ProperStrand	2	chr16	23110894	23110918	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr10	39452167	39452184	protein_coding	Rev3l	utr5	ENSMUSG00000019841	ProperStrand	39	chr10	127521199	127521270	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	1	-9.6606
chr3	87718911	87718977	protein_coding	Hdgf	utr3	ENSMUSG00000004897	ProperStrand	117	chr4	131865860	131865950	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.8519
chr2	26493432	26493522	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr6	122685551	122685614	protein_coding	Slc2a3	exon	ENSMUSG00000003153	ProperStrand	682	2	-3.2157
chr14	122856407	122856450	protein_coding	Zic5	utr3	ENSMUSG00000041703	ProperStrand	7	chr9	120038468	120038527	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-7.2707
chr7	17040701	17040717	protein_coding	Tmem160	exon	ENSMUSG00000019158	ProperStrand	55	chr3	94863086	94863131	protein_coding	Pip5k1a	utr3	ENSMUSG00000028126	ProperStrand	47	1	-13.9854
chr2	80180678	80181003	protein_coding	Dnajc10	exon	ENSMUSG00000027006	ProperStrand	36	chr16	23110964	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.6986
chr8	69904122	69904138	LTR	RMER13B	ERVK	chr8RMER13B69903872	ProperStrand	9	chr19	8963027	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.8692
chr13	12524185	12524909	protein_coding	Heatr1	exon	ENSMUSG00000050244	ProperStrand	74	chr11	68886972	68887072	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-3.7505
chr11	90916101	90916181	LINE	L1_Mur3	L1	chr11L1_Mur390915835	NonProperStrand	1	chr11	90916251	90916341	LINE	Lx6	L1	chr11Lx690916239	ProperStrand	1	1	-inf
chr7	54107268	54107337	protein_coding	Ldha	exon	ENSMUSG00000063229	ProperStrand	280	chr4	131865475	131865517	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-1.3868
chr15	88850755	88850807	protein_coding	Mov10l1	exon	ENSMUSG00000015365	ProperStrand	22	chr10	76086124	76086141	protein_coding	Col6a2	utr5	ENSMUSG00000020241	ProperStrand	13	2	-20.4249
chr4	41222080	41222129	protein_coding	Ubap2	utr5	ENSMUSG00000028433	ProperStrand	292	chr9	120038467	120038546	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	3	-2.3841
chr14	28240499	28240589	SINE	B1F1	Alu	chr14B1F128240497	ProperStrand	1	chr14	28240588	28240668	SINE	ID_B1	B4	chr14ID_B128240609	ProperStrand	1	1	-inf
chr18	73693111	73693191	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr5	74489544	74489680	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	13	-1.2598
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	2	-2.3326
chr11	50108793	50108904	protein_coding	Canx	utr3	ENSMUSG00000020368	ProperStrand	296	chr6	135102089	135102111	protein_coding	Hebp1	intron	ENSMUSG00000042770	NonProperStrand	8	7	-19.0515
chr16	22818485	22818533	protein_coding	Tbccd1	utr3	ENSMUSG00000004462	ProperStrand	3	chr17	30772308	30772324	protein_coding	Dnahc8	utr5	ENSMUSG00000033826	ProperStrand	246	1	-16.8856
chr17	56710839	56710857	protein_coding	Safb2	exon	ENSMUSG00000042625	NonProperStrand	2	chr1	89673552	89673661	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	NonProperStrand	27	1	-21.0126
chr8	72334599	72334615	protein_coding	Gmip	exon	ENSMUSG00000036246	ProperStrand	102	chr3	146080615	146080646	protein_coding	Ssx2ip	utr5	ENSMUSG00000036825	ProperStrand	19	1	-14.5847
chr10	21099854	21099874	protein_coding	Aldh8a1	intron	ENSMUSG00000037542	ProperStrand	1	chr7	38468013	38468033	protein_coding	Zfp536	intron	ENSMUSG00000043456	ProperStrand	57	1	-inf
chr2	130101987	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	chrX	34622906	34623037	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	20	-1.3940
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr19	29678580	29678596	protein_coding	C030046E11Rik	exon	ENSMUSG00000038658	ProperStrand	104	1	-6.7022
chr5	115939528	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr7	117166740	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	11	-13.3336
chr2	163841078	163841876	protein_coding	Ywhab	exon	ENSMUSG00000018326	ProperStrand	33	chr7	117189957	117190037	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.4547
chr11	77994954	77995008	protein_coding	Rpl23a	exon	ENSMUSG00000058546	ProperStrand	121	chr7	118219574	118219657	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-2.8838
chrX	128049647	128049737	LINE	Lx4B	L1	chrXLx4B128049572	ProperStrand	1	chrX	128049450	128049530	LTR	MTD	MaLR	chrXMTD128049364	ProperStrand	1	1	-inf
chr5	115607864	115607880	protein_coding	Mlec	exon	ENSMUSG00000048578	ProperStrand	47	chr11	77996587	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-6.5751
chr3	9473473	9473515	protein_coding	Zfp704	intron	ENSMUSG00000040209	ProperStrand	67	chr7	116663646	116663728	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.3245
chr10	127513730	127513748	protein_coding	Ptges3	utr3	ENSMUSG00000071072	ProperStrand	89	chr10	23505151	23505218	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-0.7462
chr9	119156985	119157075	protein_coding	Oxsr1	intron	ENSMUSG00000036737	ProperStrand	33	chr1	89673551	89673631	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-4.3823
chr15	84757806	84757864	protein_coding	Nup50	utr5	ENSMUSG00000016619	ProperStrand	39	chr7	117189991	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.1353
chr11	97694978	97695437	protein_coding	Lasp1	exon	ENSMUSG00000038366	ProperStrand	65	chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-5.6854
chr14	32042378	32042394	protein_coding	Sema3g	utr3	ENSMUSG00000021904	NonProperStrand	47	chr7	16524110	16524162	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	1	-10.2099
chr5	24209155	24209246	protein_coding	Nub1	intron	ENSMUSG00000028954	ProperStrand	32	chr4	131908358	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.4145
chr6	16170666	16170684	LINE	L1MCa	L1	chr6L1MCa16170187	ProperStrand	1	chr16	23110464	23110523	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-inf
chr14	3928753	3928802	protein_coding	Gm3002	intron	ENSMUSG00000079399	ProperStrand	26	chr9	15118257	15118333	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-5.0591
chr1	157912031	157912140	protein_coding	Tor1aip2	exon	ENSMUSG00000050565	ProperStrand	31	chr5	130300462	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-6.2876
chr6	115757992	115758092	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr9	64023701	64023746	snoRNA	ENSMUSG00000064918_SNORD18	.	ENSMUSG00000064918	ProperStrand	370	1	-2.1385
chr13	76193665	76193681	protein_coding	Gpr150	exon	ENSMUSG00000045509	NonProperStrand	63	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-5.1054
chr17	75058686	75059728	protein_coding	Birc6	exon	ENSMUSG00000024073	NonProperStrand	36	chr2	126464972	126465019	protein_coding	Gabpb1	exon	ENSMUSG00000027361	ProperStrand	54	1	-14.5627
chr15	8043746	8049140	protein_coding	Wdr70	exon	ENSMUSG00000039828	ProperStrand	16	chr7	52382755	52382817	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-9.4190
chr1	59761688	59761729	protein_coding	Nop58	intron	ENSMUSG00000026020	ProperStrand	104	chr18	35716816	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.3269
chr10	58276414	58276431	protein_coding	Sh3rf3	utr5	ENSMUSG00000037990	ProperStrand	18	chr3	68889026	68889126	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-5.5631
chr19	46080183	46080199	protein_coding	Hps6	exon	ENSMUSG00000074811	NonProperStrand	45	chr11	106362304	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	2	-10.3874
chr5	108336916	108337019	protein_coding	Rpl5	utr3	ENSMUSG00000058558	ProperStrand	235	chr7	148634814	148634837	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	6	-10.7500
chr15	100165541	100165614	protein_coding	Mettl7a3	exon	ENSMUSG00000058057	ProperStrand	2	chr9	15119631	15119710	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-inf
chr6	67227769	67231806	protein_coding	Serbp1	exon	ENSMUSG00000036371	ProperStrand	261	chr15	79913288	79913333	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-2.2755
chr4	131866614	131866676	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	chrX	143918922	143918964	snoRNA	ENSMUSG00000084421_SNORA35	.	ENSMUSG00000084421	ProperStrand	293	1	-5.9588
mmu-miR-6238	1	18	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr17	24665481	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	2	-4.2384
chr11	75569109	75569177	protein_coding	Ywhae	exon	ENSMUSG00000020849	ProperStrand	176	chr11	62416974	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	2	-6.6652
chr10	127676926	127676942	protein_coding	Timeless	utr5	ENSMUSG00000039994	ProperStrand	53	chr17	24665421	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	2	-8.5254
chr2	158453870	158453960	protein_coding	Actr5	exon	ENSMUSG00000037761	ProperStrand	5	chr11	62416601	62416622	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	4	-19.7112
chr10	100022282	100023879	protein_coding	Cep290	exon	ENSMUSG00000019971	ProperStrand	12	chr4	137085484	137087564	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	2	-17.9702
chr5	104265799	104265830	protein_coding	Aff1	intron	ENSMUSG00000029313	ProperStrand	82	chr16	23111377	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-2.8713
chr4	55431651	55431668	lincRNA	Gm12505	exon	ENSMUSG00000087070	ProperStrand	447	chr5	115940294	115940406	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	1	-4.7824
chr5	46090088	46090113	protein_coding	Ncapg	exon	ENSMUSG00000015880	ProperStrand	36	chr2	158182156	158182247	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	2	-9.7819
chr9	15130724	15130814	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	chr8	13876095	13876175	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-3.2136
chr2	113968759	113977296	protein_coding	Aqr	exon	ENSMUSG00000040383	ProperStrand	70	chr11	106362340	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	3	-12.8842
chr4	131866176	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	chr3	153574606	153574655	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	8	-10.4692
chr3	130432036	130432150	protein_coding	Rpl34	exon	ENSMUSG00000062006	ProperStrand	51	chr16	23111394	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.4898
chr11	68067261	68067277	protein_coding	Ntn1	intron	ENSMUSG00000020902	NonProperStrand	194	chr11	6428108	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.2832
chr5	28078856	28078953	protein_coding	Paxip1	intron	ENSMUSG00000002221	ProperStrand	34	chr14	52829459	52829520	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	2	-14.7973
chr7	52382082	52382932	protein_coding	Rpl13a	exon	ENSMUSG00000074129	ProperStrand	269	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	11	-0.8524
chr2	102144227	102144315	protein_coding	Trim44	utr3	ENSMUSG00000027189	ProperStrand	26	chr1	162965986	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-5.2030
chr8	113414458	113415963	protein_coding	Fuk	exon	ENSMUSG00000033703	ProperStrand	18	chrX	71517821	71517921	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-8.9682
chr2	76690968	76691221	protein_coding	Ttn	exon	ENSMUSG00000051747	NonProperStrand	27	chr7	117189863	117189953	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-7.8034
chr16	23110455	23110517	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	chrX	113862541	113862571	snoRNA	ENSMUSG00000088518_SNORA9	.	ENSMUSG00000088518	ProperStrand	280	2	-0.9276
chr11	69483136	69483236	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	chr1	161270527	161270554	snoRNA	ENSMUSG00000089536_Scarna3a	.	ENSMUSG00000089536	ProperStrand	247	4	-2.9345
chr12	106269355	106269435	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	NonProperStrand	38	chr5	130300459	130300549	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	NonProperStrand	11	1	-17.5665
chr4	155331411	155331454	protein_coding	Ube2j2	exon	ENSMUSG00000023286	ProperStrand	35	chr19	8798741	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	2	-9.5576
chr7	63129050	63129109	protein_coding	Cyfip1	exon	ENSMUSG00000030447	ProperStrand	23	chr10	23505152	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-7.2788
chr4	3761770	3762102	protein_coding	Rps20	exon	ENSMUSG00000028234	ProperStrand	71	chr11	69481335	69481375	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-2.8992
chr13	80636125	80636144	LINE	Lx8	L1	chr13Lx880635645	ProperStrand	20	chr2	163979308	163979326	protein_coding	Stk4	utr3	ENSMUSG00000018209	NonProperStrand	4	1	-20.2991
chr9	65044377	65044455	snRNA	ENSMUSG00000075763_U5	.	ENSMUSG00000075763	ProperStrand	216	chr9	64024929	64024998	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	1	-6.5934
chr3	125572609	125572631	protein_coding	Ugt8a	intron	ENSMUSG00000032854	ProperStrand	16	chr1	162965979	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-10.0921
chr16	14163618	14163634	protein_coding	Nde1	intron	ENSMUSG00000022678	NonProperStrand	2	chr4	131908836	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-8.0336
chr2	121268222	121268243	protein_coding	Ell3	exon	ENSMUSG00000027246	ProperStrand	14	chr3	89750435	89750451	protein_coding	Atp8b2	exon	ENSMUSG00000060671	ProperStrand	140	1	-14.5761
chr16	64872102	64872182	DNA	URR1B	MER1_type	chr16URR1B64872104	NonProperStrand	1	chr16	64871870	64871960	LTR	MTEb	MaLR	chr16MTEb64871737	NonProperStrand	1	1	-inf
chr18	10052132	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr2	37502726	37502742	protein_coding	Strbp	utr5	ENSMUSG00000026915	ProperStrand	90	1	-7.9902
chr17	39985043	39985097	pseudogene	AY036118	.	ENSMUSG00000045999	ProperStrand	57	chr19	8799022	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	NonProperStrand	4	1	-19.0170
chr2	172957824	172957841	antisense	1300015D01Rik	.	ENSMUSG00000087382	ProperStrand	34	chr4	131908689	131908750	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.0811
chr13	62944660	62944677	protein_coding	Fbp2	intron	ENSMUSG00000021456	ProperStrand	100	chr15	98350209	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-3.7925
chr5	124735540	124736400	protein_coding	Mphosph9	exon	ENSMUSG00000038126	ProperStrand	23	chr11	48616677	48616708	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	1	-11.2859
chr7	4972508	4972527	protein_coding	Zfp865	intron	ENSMUSG00000074405	NonProperStrand	4	chr4	131865902	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-11.7931
chr11	107042248	107042338	protein_coding	Nol11	exon	ENSMUSG00000018433	ProperStrand	12	chr19	8963096	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.2811
chr9	7854377	7854393	protein_coding	Birc3	exon	ENSMUSG00000032000	ProperStrand	4	chr16	90386836	90386853	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	1	-18.1468
chr13	23392049	23392066	lincRNA	4930557F10Rik	intron	ENSMUSG00000085488	NonProperStrand	51	chrX	130889366	130889432	protein_coding	Cenpi	intron	ENSMUSG00000031262	ProperStrand	12	1	-16.9413
chr16	14473627	14474150	protein_coding	Abcc1	utr3	ENSMUSG00000023088	ProperStrand	35	chr4	131908236	131908341	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-6.1465
chr11	115940186	115940288	protein_coding	Wbp2	utr3	ENSMUSG00000034341	ProperStrand	39	chr16	98168828	98168846	protein_coding	Zfp295	utr3	ENSMUSG00000046962	ProperStrand	63	3	-20.1922
chr10	84619905	84647124	protein_coding	Cry1	exon	ENSMUSG00000020038	ProperStrand	33	chr10	70844888	70844923	protein_coding	Ipmk	utr3	ENSMUSG00000060733	ProperStrand	22	1	-16.5611
chr11	68886971	68887003	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	chr5	125884616	125884654	tRNA	tRNA1317-AlaTGC	.	609123	ProperStrand	149	2	-4.3957
chr5	121655016	121655051	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	chr2	166890781	166890858	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	1	-1.3042
chr2	129998666	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr19	37223549	37223566	protein_coding	Cpeb3	intron	ENSMUSG00000039652	NonProperStrand	23	1	-10.0445
chr10	41994729	41994797	protein_coding	Foxo3	exon	ENSMUSG00000048756	ProperStrand	59	chr15	98356776	98356811	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	2	-12.4529
chr12	58691976	58691992	antisense	4921518K17Rik	.	ENSMUSG00000085851	ProperStrand	75	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.4339
chr14	80262508	80262525	lincRNA	Gm6999	intron	ENSMUSG00000075495	ProperStrand	265	chr2	32818178	32818566	protein_coding	Rpl12	exon	ENSMUSG00000038900	ProperStrand	167	1	-8.2872
chr7	117189865	117189933	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr11	74718963	74719009	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	1	-2.2290
chr1	55137916	55137961	protein_coding	Hspd1	exon	ENSMUSG00000025980	ProperStrand	140	chr17	35089182	35089210	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-3.8640
chr13	103895241	103895257	protein_coding	Mast4	intron	ENSMUSG00000034751	ProperStrand	150	chr9	78326647	78326820	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-4.5523
chr15	89252587	89252766	protein_coding	Cpt1b	exon	ENSMUSG00000078937	ProperStrand	5	chr6	71832550	71832573	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	3	-19.9208
chr14	75734304	75734404	protein_coding	Zc3h13	intron	ENSMUSG00000022000	ProperStrand	42	chr10	23505559	23505617	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	5	-19.8977
chr19	38146427	38146527	snoRNA	ENSMUSG00000064646_SNORA42	.	ENSMUSG00000064646	ProperStrand	37	chr10	23505152	23505201	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.9550
chr6	84536995	84537012	protein_coding	Cyp26b1	intron	ENSMUSG00000063415	ProperStrand	27	chr15	79908932	79908956	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-7.0558
chr1	63225584	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	chr15	79908952	79909019	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	6	-3.9494
chr9	15130752	15130789	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	chr18	33954914	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-1.0583
chr2	156656553	156656600	LTR	RLTR1	ERV1	chr2RLTR1156656367	ProperStrand	10	chr4	41160816	41160853	protein_coding	Ubap2	utr5	ENSMUSG00000028433	ProperStrand	292	5	-19.0312
chrX	35927547	35927637	protein_coding	Cul4b	intron	ENSMUSG00000031095	NonProperStrand	89	chr5	124115395	124115485	protein_coding	Clip1	intron	ENSMUSG00000049550	ProperStrand	27	1	-14.1389
mmu-miR-5100	5	20	miRNA	mmu-miR-5100	.	mmu-miR-5100	ProperStrand	132	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-6.1774
chrX	162040823	162040844	LTR	RMER17A2	ERVK	chrXRMER17A2162039877	NonProperStrand	2	chr3	123210854	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-inf
chr4	131908685	131908897	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	chr4	131865380	131865508	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	183	-17.4746
chr11	113523870	113523888	protein_coding	Cog1	utr3	ENSMUSG00000018661	ProperStrand	51	chr2	158182214	158182277	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-5.3185
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	2	-5.6249
chr17	25402137	25402169	protein_coding	Ube2i	exon	ENSMUSG00000015120	ProperStrand	20	chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	1	-11.0529
chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	chr19	38911584	38911602	protein_coding	Tbc1d12	exon	ENSMUSG00000048720	ProperStrand	2	1	-16.8231
chr3	80840480	80840498	protein_coding	Pdgfc	utr5	ENSMUSG00000028019	NonProperStrand	4	chr9	120040602	120040660	protein_coding	Rpsa	utr3	ENSMUSG00000032518	ProperStrand	398	1	-15.2020
chr3	142351261	142351279	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr17	35138149	35138457	protein_coding	Vars	utr5	ENSMUSG00000007029	ProperStrand	121	1	-6.4035
chr8	46855240	46855906	protein_coding	Sorbs2	exon	ENSMUSG00000031626	ProperStrand	50	chr19	8800412	8800438	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-3.8690
chr19	8798481	8798554	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	chr18	33954816	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	17	-1.1054
chr4	57869320	57869412	protein_coding	Gm20459	exon	ENSMUSG00000089945	ProperStrand	31	chr15	34370545	34370570	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-4.8024
chr11	78155741	78155799	protein_coding	Pigs	utr3	ENSMUSG00000041958	ProperStrand	31	chr5	130300496	130300555	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	6	-19.1071
chr13	55423520	55423565	protein_coding	Prelid1	utr5	ENSMUSG00000021486	ProperStrand	19	chr5	130300417	130300507	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.6362
chr15	8109319	8109335	protein_coding	Nup155	utr3	ENSMUSG00000022142	NonProperStrand	8	chr11	114530227	114533056	protein_coding	Rpl38	exon	ENSMUSG00000057322	ProperStrand	29	2	-inf
chr2	48760556	48760572	protein_coding	Orc4	utr3	ENSMUSG00000026761	ProperStrand	95	chr2	27317097	27317131	protein_coding	Brd3	exon	ENSMUSG00000026918	ProperStrand	85	1	-11.6897
chr13	96247406	96248477	protein_coding	S100z	exon	ENSMUSG00000021679	NonProperStrand	43	chr17	45707266	45707317	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	1	-7.3936
chr16	20532105	20532205	protein_coding	Dvl3	intron	ENSMUSG00000003233	ProperStrand	6	chr16	23110971	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-14.1985
chr13	9833551	9833675	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr13	53331822	53331850	protein_coding	Ror2	intron	ENSMUSG00000021464	ProperStrand	46	3	-12.7739
chr3	152450608	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	chr6	115757992	115758141	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	6	-10.0271
chr1	53404579	53404619	protein_coding	Asnsd1	exon	ENSMUSG00000026095	ProperStrand	6	chr7	116663675	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-7.0045
chr11	6315919	6315963	protein_coding	Ppia	exon	ENSMUSG00000071866	ProperStrand	127	chr19	8963027	8963080	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.1421
chr7	24779190	24779213	SINE	ID_B1	B4	chr7ID_B124779183	NonProperStrand	54	chr4	106111701	106111717	protein_coding	Usp24	utr3	ENSMUSG00000028514	ProperStrand	74	1	-13.1049
chr11	120148960	120148976	protein_coding	Bahcc1	exon	ENSMUSG00000039741	NonProperStrand	268	chr4	116826699	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-3.8866
chr16	10412495	10412540	protein_coding	Nubp1	intron	ENSMUSG00000022503	ProperStrand	5	chr16	23110832	23110873	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr9	61772240	61772271	protein_coding	Kif23	intron	ENSMUSG00000032254	ProperStrand	41	chr19	8799581	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-7.5257
chr11	53233094	53233153	protein_coding	Aff4	utr3	ENSMUSG00000049470	ProperStrand	94	chr16	35932620	35932636	protein_coding	Dtx3l	exon	ENSMUSG00000049502	ProperStrand	152	2	-16.5574
chr1	24035556	24035603	protein_coding	Fam135a	exon	ENSMUSG00000026153	ProperStrand	8	chr8	87525135	87525238	protein_coding	Hook2	exon	ENSMUSG00000052566	ProperStrand	204	1	-15.0078
chrY	581857	581874	protein_coding	Uty	exon	ENSMUSG00000068457	ProperStrand	26	chr11	62416951	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-7.7113
chr6	25737912	25737973	protein_coding	Pot1a	intron	ENSMUSG00000029676	ProperStrand	3	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr8	3507162	3507193	protein_coding	Mcoln1	exon	ENSMUSG00000004567	ProperStrand	15	chr4	131908689	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.5353
chr16	22140401	22140491	protein_coding	Igf2bp2	intron	ENSMUSG00000033581	ProperStrand	23	chr17	13112531	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-6.4633
chr6	64088282	64088301	protein_coding	Grid2	intron	ENSMUSG00000071424	NonProperStrand	76	chr7	117190016	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.9073
chr11	113513363	113513379	protein_coding	Cog1	exon	ENSMUSG00000018661	NonProperStrand	38	chr9	70960075	70960092	protein_coding	Aqp9	exon	ENSMUSG00000032204	NonProperStrand	118	1	-12.8783
chr15	98745744	98745773	protein_coding	Lmbr1l	intron	ENSMUSG00000022999	ProperStrand	8	chr16	23110516	23110957	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.2180
chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	2	-12.1112
chr9	30897537	30898011	protein_coding	St14	exon	ENSMUSG00000031995	ProperStrand	90	chr15	79913288	79913346	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.8591
chr5	147646777	147646845	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	chr4	41158543	41158579	snoRNA	ENSMUSG00000089308_SNORD121A	.	ENSMUSG00000089308	ProperStrand	209	1	-5.4947
chr4	116826697	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	chr15	98350146	98350279	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	5	-1.8222
chr17	29778871	29778921	protein_coding	Ftsjd2	intron	ENSMUSG00000024019	ProperStrand	31	chr4	148506497	148506518	protein_coding	Apitd1	intron	ENSMUSG00000073705	NonProperStrand	4	4	-inf
chr2	25357832	25357865	protein_coding	Fbxw5	intron	ENSMUSG00000015095	ProperStrand	12	chr17	31120939	31120955	protein_coding	Umodl1	exon	ENSMUSG00000054134	ProperStrand	24	1	-18.2317
chr4	43505730	43505810	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr1	158611247	158611337	protein_coding	Fam20b	utr3	ENSMUSG00000033557	ProperStrand	15	1	-5.7264
chr9	35374549	35374594	protein_coding	Pus3	utr3	ENSMUSG00000032103	ProperStrand	2	chr18	35716857	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-inf
chrX	91436251	91441661	protein_coding	Eif2s3x	exon	ENSMUSG00000035150	ProperStrand	55	chr2	130101974	130102064	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-5.5266
chr2	30877970	30878005	protein_coding	Usp20	utr3	ENSMUSG00000026854	ProperStrand	11	chr3	123210893	123210983	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.2109
chr18	78018836	78018926	protein_coding	Atp5a1	exon	ENSMUSG00000025428	ProperStrand	254	chr5	130300459	130300539	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-1.1295
chr15	4962082	4962098	protein_coding	C7	utr3	ENSMUSG00000079105	ProperStrand	63	chr2	130101259	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-6.4945
chr17	45707617	45707734	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr11	69482352	69482375	snoRNA	ENSMUSG00000089542_snoU6-77	.	ENSMUSG00000089542	ProperStrand	138	6	-inf
chr9	108436688	108436728	protein_coding	Qrich1	exon	ENSMUSG00000006673	ProperStrand	30	chr4	131908320	131908410	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-4.4753
chr3	95119046	95125820	protein_coding	Lass2	exon	ENSMUSG00000015714	ProperStrand	16	chr16	23110828	23111010	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-5.6614
chr6	47731682	47731710	misc_RNA	Y_RNA	.	ENSMUSG00000064945	ProperStrand	93	chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	1	-8.6109
chr1	155287314	155287355	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	chr12	110874223	110874290	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	4	-17.1356
chr2	32489779	32489810	protein_coding	Ak1	utr3	ENSMUSG00000026817	ProperStrand	33	chr16	23111691	23111758	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-7.5501
chr4	43505690	43505780	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr4	44318913	44318962	protein_coding	Melk	exon	ENSMUSG00000035683	ProperStrand	58	1	-3.1313
chr2	73747929	73747976	protein_coding	Atp5g3	exon	ENSMUSG00000018770	ProperStrand	41	chr11	62418049	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-6.3075
chr2	90235303	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	118745012	118745045	protein_coding	Bahd1	exon	ENSMUSG00000040007	ProperStrand	10	1	-8.0457
chr7	73076627	73097880	protein_coding	Pcsk6	exon	ENSMUSG00000030513	ProperStrand	32	chr1	162968213	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-8.0739
chr2	35505525	35505615	protein_coding	Dab2ip	intron	ENSMUSG00000026883	ProperStrand	93	chr16	23111371	23111451	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.7189
chr3	40739577	40739594	protein_coding	3110057O12Rik	utr3	ENSMUSG00000037818	ProperStrand	2	chr11	69483146	69483236	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-inf
chr5	24224119	24224153	protein_coding	Wdr86	exon	ENSMUSG00000055235	ProperStrand	4	chr10	23505152	23505232	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-10.6986
chr6	115757945	115758045	protein_coding	Rpl32	intron	ENSMUSG00000057841	ProperStrand	137	chr18	75160711	75160777	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	1	-7.5395
chr18	46937959	46937976	protein_coding	Ap3s1	intron	ENSMUSG00000024480	ProperStrand	8	chrX	132673816	132673833	protein_coding	Bex4	intron	ENSMUSG00000047844	NonProperStrand	70	1	-17.0617
chr16	3744628	3744718	protein_coding	Zfp263	exon	ENSMUSG00000022529	ProperStrand	17	chr15	79908929	79909009	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-7.9934
chr4	151730301	151730737	protein_coding	Chd5	exon	ENSMUSG00000005045	NonProperStrand	147	chr15	101104766	101104785	protein_coding	Nr4a1	utr3	ENSMUSG00000023034	ProperStrand	2	1	-19.8521
chr6	99576454	99576544	protein_coding	Eif4e3	utr3	ENSMUSG00000030068	ProperStrand	12	chr3	123210853	123210933	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.0354
chr12	20242599	20242699	LTR	RLTR9D	ERVK	chr12RLTR9D20242492	NonProperStrand	1	chr4	131908356	131908413	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-inf
chr11	68936358	68936374	protein_coding	Hes7	exon	ENSMUSG00000023781	NonProperStrand	66	chr16	11240916	11253836	protein_coding	Gspt1	exon	ENSMUSG00000062203	ProperStrand	49	1	-13.5337
chr15	98356777	98356913	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	chr2	26494705	26494834	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	9	-3.0107
chr11	106122970	106123002	protein_coding	Psmc5	exon	ENSMUSG00000020708	ProperStrand	51	chr14	22200810	22242749	protein_coding	Adk	exon	ENSMUSG00000039197	ProperStrand	32	1	-14.9224
chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	chr18	75161108	75161172	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	1	-4.7565
chr2	32645770	32645798	protein_coding	Stxbp1	intron	ENSMUSG00000026797	ProperStrand	33	chr5	14252800	14252816	protein_coding	Sema3e	utr3	ENSMUSG00000063531	ProperStrand	125	1	-13.0459
chr17	34046483	34046499	protein_coding	Daxx	utr5	ENSMUSG00000002307	ProperStrand	26	chr8	73419682	73419743	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.7022
chr11	48617728	48619514	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	chr16	23110843	23111010	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	26	-6.6401
chr9	108294302	108294392	protein_coding	Usp4	utr3	ENSMUSG00000032612	ProperStrand	29	chr16	23110460	23110540	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.7712
chr4	57706987	57707003	protein_coding	Palm2	intron	ENSMUSG00000090053	NonProperStrand	187	chr8	98269959	98270002	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-3.3843
chr2	25105896	25107254	protein_coding	Ndor1	exon	ENSMUSG00000006471	NonProperStrand	84	chr4	131865871	131865901	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.2741
chr2	129998643	129998713	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr11	106874216	106874255	tRNA	tRNA945-ArgCCG	.	722473	ProperStrand	133	2	-10.5438
chr6	65820356	65820393	protein_coding	Prdm5	exon	ENSMUSG00000029913	ProperStrand	50	chr11	99071587	99074445	protein_coding	Smarce1	exon	ENSMUSG00000037935	ProperStrand	38	1	-14.6050
chr7	127897512	127897549	protein_coding	Vwa3a	intron	ENSMUSG00000030889	NonProperStrand	4	chr4	131908809	131908890	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-6.2660
chr1	16091987	16092609	protein_coding	Rpl7	exon	ENSMUSG00000043716	ProperStrand	93	chr9	120037931	120038021	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-3.8746
chr19	5493423	5493523	protein_coding	Cfl1	intron	ENSMUSG00000056201	ProperStrand	88	chr7	117189948	117189979	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.6505
chr10	92919821	92919837	protein_coding	Lta4h	intron	ENSMUSG00000015889	ProperStrand	12	chr3	145596921	145596957	protein_coding	Bcl10	utr3	ENSMUSG00000028191	ProperStrand	14	1	-inf
chr5	91087398	91087415	SINE	ID_B1	B4	chr5ID_B191087346	ProperStrand	10	chr18	60990954	60991027	protein_coding	Tcof1	intron	ENSMUSG00000024613	ProperStrand	68	1	-16.6891
chr7	146633227	146633255	protein_coding	Inpp5a	intron	ENSMUSG00000025477	ProperStrand	166	chr17	35088957	35089015	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	4	-12.7056
chr16	56035919	56035948	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	chr11	69481332	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	4	-1.8596
chr5	73563222	73563238	protein_coding	Fryl	intron	ENSMUSG00000070733	ProperStrand	173	chr18	73693085	73693104	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-3.5099
chr4	153432511	153432538	protein_coding	Trp73	utr3	ENSMUSG00000029026	ProperStrand	8	chr16	23110960	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.2180
chr1	118626981	118627071	LINE	L1Md_F2	L1	chr1L1Md_F2118626743	NonProperStrand	1	chr1	118627408	118627488	LINE	L1Md_F2	L1	chr1L1Md_F2118627186	NonProperStrand	1	1	-inf
chr10	75322171	75322209	protein_coding	Mif	utr3	ENSMUSG00000033307	ProperStrand	146	chr16	23110533	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.1052
chr1	71644049	71644104	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr2	3693068	3693084	protein_coding	Fam107b	intron	ENSMUSG00000026655	NonProperStrand	15	1	-10.6436
chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	chr7	28959571	28959587	protein_coding	Fbl	exon	ENSMUSG00000046865	ProperStrand	52	2	-17.0221
chr13	9833553	9833674	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr4	124684899	124684915	protein_coding	Rspo1	exon	ENSMUSG00000028871	NonProperStrand	4	2	-17.1104
chr4	132867629	132867665	protein_coding	Wdtc1	intron	ENSMUSG00000037622	ProperStrand	81	chr19	8800354	8800458	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	6	-16.2844
chr10	104927180	104927196	protein_coding	Tmtc2	intron	ENSMUSG00000036019	ProperStrand	72	chr11	69483238	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.1448
chr6	134684304	134742070	protein_coding	Dusp16	intron	ENSMUSG00000030203	ProperStrand	27	chr3	123210854	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-5.9384
chr11	98855668	98856559	protein_coding	Top2a	exon	ENSMUSG00000020914	ProperStrand	324	chr2	26493422	26493485	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	3	-3.2026
chr17	33088738	33088755	pseudogene	Cyp4f41-ps	.	ENSMUSG00000024295	NonProperStrand	9	chr4	131908809	131908890	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-15.2972
chr7	125303110	125303136	protein_coding	Smg1	exon	ENSMUSG00000030655	ProperStrand	70	chr9	15118563	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	1	-9.0326
chr7	116663659	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	chr7	134671388	134671518	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	11	-2.7968
chr4	131865380	131865470	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	chr5	147646770	147646850	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	3	-1.0421
chr11	48689619	48689709	LINE	Lx8	L1	chr11Lx848689533	NonProperStrand	1	chr11	48689443	48689523	Simple_repeat	(CA)n	Simple_repeat	chr11(CA)n48689465	ProperStrand	1	1	-inf
chr3	144141680	144141697	protein_coding	Hs2st1	intron	ENSMUSG00000040151	NonProperStrand	31	chr7	117189863	117189909	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-7.5250
chr13	97436144	97436497	protein_coding	Hmgcr	exon	ENSMUSG00000021670	ProperStrand	56	chr4	147514736	147514753	protein_coding	Mad2l2	utr5	ENSMUSG00000029003	ProperStrand	17	1	-16.0063
chr6	145519478	145519497	protein_coding	Ifltd1	intron	ENSMUSG00000054966	ProperStrand	12	chr16	23110455	23110514	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.4970
chr14	76247711	76247752	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	chr2	103880824	103880913	snoRNA	ENSMUSG00000087739_SCARNA21	.	ENSMUSG00000087739	ProperStrand	50	1	-4.5194
chr9	78023109	78023169	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	3	-2.4993
chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	chr5	54389950	54389966	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	1	-6.0020
chr6	124909962	124911176	protein_coding	Cops7a	exon	ENSMUSG00000030127	ProperStrand	16	chr6	71832614	71832642	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-8.2591
chr17	46861595	46861611	protein_coding	Pex6	exon	ENSMUSG00000002763	ProperStrand	292	chr1	162968441	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-3.0777
chr1	88248582	88248600	snoRNA	ENSMUSG00000064696_SNORD20	.	ENSMUSG00000064696	ProperStrand	89	chr16	23110454	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.8165
chr2	164333372	164333472	protein_coding	Pigt	utr3	ENSMUSG00000017721	ProperStrand	45	chr19	8799590	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	5	-inf
chr2	4829164	4829180	protein_coding	Sephs1	utr3	ENSMUSG00000026662	NonProperStrand	271	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-5.9365
chr1	91737680	91737744	protein_coding	Agap1	intron	ENSMUSG00000055013	ProperStrand	229	chr1	162967540	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-1.2692
chr16	8698078	8698602	protein_coding	Usp7	exon	ENSMUSG00000022710	ProperStrand	118	chr7	28111577	28111593	protein_coding	Ltbp4	exon	ENSMUSG00000040488	ProperStrand	91	1	-11.1179
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	1	-4.0725
chr7	24779190	24779213	SINE	ID_B1	B4	chr7ID_B124779183	NonProperStrand	54	chr5	145582816	145582832	protein_coding	Trrap	exon	ENSMUSG00000045482	NonProperStrand	4	1	-18.8381
chr1	187194830	187231610	protein_coding	Eprs	exon	ENSMUSG00000026615	ProperStrand	149	chr4	131908236	131908341	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-2.4504
chr3	156224612	156224628	lincRNA	4930570G19Rik	exon	ENSMUSG00000085084	ProperStrand	326	chr17	6138911	6138928	protein_coding	Tulp4	exon	ENSMUSG00000034377	ProperStrand	164	1	-7.9117
chr19	7352559	7355520	protein_coding	Mark2	exon	ENSMUSG00000024969	ProperStrand	75	chr11	62416614	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-4.7351
chr8	13416896	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr18	61896558	61896574	protein_coding	Afap1l1	exon	ENSMUSG00000033032	ProperStrand	3	1	-12.7981
chr8	72425283	72425383	protein_coding	Ndufa13	intron	ENSMUSG00000036199	ProperStrand	11	chr2	130101259	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-10.0333
chr18	35716763	35716827	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	chr12	81492598	81492658	snoRNA	ENSMUSG00000088158_Scarna3b	.	ENSMUSG00000088158	ProperStrand	147	1	-0.8797
chr7	108440949	108440967	protein_coding	Atg16l2	intron	ENSMUSG00000047767	ProperStrand	121	chr11	6428076	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.9893
chr10	79643172	79643272	protein_coding	Efna2	intron	ENSMUSG00000003070	ProperStrand	4	chr1	162966214	162966269	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-13.2442
chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-8.1352
chr5	75380950	75380966	LINE	L3	CR1	chr5L375380904	NonProperStrand	4	chr9	50816824	50816841	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	1	-17.5987
chr16	13876154	13876213	protein_coding	Pdxdc1	exon	ENSMUSG00000022680	ProperStrand	26	chr4	41150098	41150141	snoRNA	ENSMUSG00000089265_SNORD121A	.	ENSMUSG00000089265	ProperStrand	370	1	-11.3598
chr19	8800454	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	chr19	8799357	8799406	snoRNA	ENSMUSG00000065280_SNORD28	.	ENSMUSG00000065280	ProperStrand	269	4	-4.9110
chr16	14457996	14459113	protein_coding	Abcc1	utr5	ENSMUSG00000023088	ProperStrand	35	chr7	148634716	148634796	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-5.0192
chr7	129303429	129304060	protein_coding	Plk1	exon	ENSMUSG00000030867	ProperStrand	146	chr4	122968599	122968689	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-4.5520
chr7	4721797	4721887	antisense	Fam71e2	.	ENSMUSG00000049952	ProperStrand	1	chr7	4721905	4721985	protein_coding	Fam71e2	exon	ENSMUSG00000049952	ProperStrand	1	1	-inf
chr11	59632628	59632718	protein_coding	Cops3	intron	ENSMUSG00000019373	ProperStrand	19	chr16	23110499	23110579	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.5826
chr3	97013176	97013204	protein_coding	Bcl9	exon	ENSMUSG00000038256	ProperStrand	94	chr5	130295428	130295518	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-4.3844
chr7	120045126	120045194	protein_coding	Tead1	utr3	ENSMUSG00000055320	ProperStrand	217	chr9	15119297	15119397	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	8	-19.6908
chr16	87419147	87419182	protein_coding	Ltn1	intron	ENSMUSG00000052299	ProperStrand	49	chr13	51743580	51743675	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	5	-21.1102
chr4	104815611	104815691	LTR	RLTR44A	ERVK	chr4RLTR44A104815537	NonProperStrand	1	chr4	104815928	104816018	SINE	B2_Mm2	B2	chr4B2_Mm2104815931	NonProperStrand	1	1	-inf
chr1	120733767	120733783	protein_coding	Gli2	exon	ENSMUSG00000048402	NonProperStrand	14	chr7	148634702	148634792	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	5	-inf
chr8	54899050	54899130	Low_complexity	CT-rich	Low_complexity	chr8CT-rich54898975	ProperStrand	1	chr8	54899246	54899336	SINE	ID_B1	B4	chr8ID_B154899182	NonProperStrand	1	1	-inf
chr10	29174133	29219751	protein_coding	Rspo3	exon	ENSMUSG00000019880	ProperStrand	15	chr12	11098801	11098817	protein_coding	Kcns3	exon	ENSMUSG00000043673	NonProperStrand	7	1	-inf
chr1	133141328	133141345	protein_coding	Rassf5	exon	ENSMUSG00000026430	ProperStrand	73	chr9	104218697	104218714	protein_coding	Acpp	intron	ENSMUSG00000032561	ProperStrand	17	1	-15.4859
chr6	88839013	88839103	protein_coding	Mcm2	exon	ENSMUSG00000002870	ProperStrand	83	chr2	166890498	166890559	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	14	-19.3508
chr4	137298524	137314557	protein_coding	Alpl	exon	ENSMUSG00000028766	ProperStrand	80	chr4	131908265	131908355	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-2.0328
chr3	88117526	88122301	protein_coding	Cct3	exon	ENSMUSG00000001416	ProperStrand	82	chr9	120038513	120038547	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.4922
chr5	3693225	3693241	protein_coding	Ankib1	exon	ENSMUSG00000040351	NonProperStrand	98	chr1	162965535	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.4133
chr7	52309977	52309993	protein_coding	Prrg2	exon	ENSMUSG00000007837	NonProperStrand	281	chr10	5992778	5992806	protein_coding	Akap12	exon	ENSMUSG00000038587	ProperStrand	1008	1	-4.6499
chr11	62416575	62416599	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr18	35714194	35714291	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	3	-1.4733
chr6	94776855	94776877	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	chr15	34370545	34370604	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	3	-1.7614
chr14	61583933	61584002	protein_coding	Tnfrsf19	utr3	ENSMUSG00000060548	ProperStrand	34	chr1	162965532	162965587	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.3385
mmu-miR-6240	2	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr1	165983749	165983765	protein_coding	Sele	exon	ENSMUSG00000026582	NonProperStrand	31	1	-7.2158
chr2	130107188	130107250	protein_coding	Idh3b	exon	ENSMUSG00000027406	ProperStrand	146	chr5	130300480	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-3.5422
chr19	3491361	3491386	protein_coding	Ppp6r3	intron	ENSMUSG00000024908	ProperStrand	63	chr11	69483183	69483273	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.3670
chr17	23945453	23952558	protein_coding	Srrm2	utr5	ENSMUSG00000039218	ProperStrand	521	chr4	131866154	131866245	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	3	-1.7754
chr8	87426786	87426804	protein_coding	Klf1	exon	ENSMUSG00000054191	NonProperStrand	70	chr4	131865380	131865456	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-3.7140
chr11	6428059	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chrX	113862523	113862574	snoRNA	ENSMUSG00000088518_SNORA9	.	ENSMUSG00000088518	ProperStrand	280	138	-21.3998
chr5	138608338	138608402	protein_coding	Mcm7	exon	ENSMUSG00000029730	ProperStrand	258	chr11	83107806	83107896	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	9	-inf
mmu-miR-2137	3	20	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	chr19	6316898	6317233	protein_coding	Cdc42bpg	exon	ENSMUSG00000024769	ProperStrand	90	5	-19.3615
chr2	20612207	20612293	protein_coding	Etl4	intron	ENSMUSG00000036617	ProperStrand	86	chr8	32260335	32260363	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-3.9469
chr5	28086559	28086592	protein_coding	Paxip1	exon	ENSMUSG00000002221	ProperStrand	34	chrX	165695583	165695599	protein_coding	Arhgap6	exon	ENSMUSG00000031355	ProperStrand	74	1	-14.0376
chr11	100487841	100487908	protein_coding	Nkiras2	utr3	ENSMUSG00000017837	ProperStrand	4	chr9	120039558	120039622	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	3	-20.1204
chr11	17103976	17108820	protein_coding	Pno1	exon	ENSMUSG00000020116	ProperStrand	5	chr9	15119398	15119427	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-10.2148
chr14	15572351	15572371	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr7	29136530	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	4	-4.2414
chr19	25016725	25016784	snoRNA	ENSMUSG00000064896_SNORA19	.	ENSMUSG00000064896	ProperStrand	88	chr17	35089196	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	2	-7.8495
chr2	11870434	11870451	LINE	L1_Mur2	L1	chr2L1_Mur211870436	NonProperStrand	1	chr7	117166823	117166855	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-inf
chr7	52391193	52391283	protein_coding	Rpl13a	intron	ENSMUSG00000074129	ProperStrand	269	chr7	52391431	52391521	protein_coding	Flt3l	utr5	ENSMUSG00000089989	ProperStrand	2	1	-18.0561
chr10	79174585	79174607	protein_coding	Bsg	utr3	ENSMUSG00000023175	ProperStrand	107	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-5.8414
chr11	97698157	97698207	protein_coding	Lasp1	utr3	ENSMUSG00000038366	ProperStrand	65	chr5	135857995	135858011	protein_coding	Pom121	exon	ENSMUSG00000053293	NonProperStrand	94	1	-12.2498
chr4	40970662	40970728	protein_coding	Nfx1	exon	ENSMUSG00000028423	ProperStrand	39	chr4	129662257	129662276	protein_coding	Bai2	utr5	ENSMUSG00000028782	ProperStrand	119	2	-19.1305
chr16	57391725	57391791	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr6	47895469	47895545	pseudogene	Zfp783	.	ENSMUSG00000072653	NonProperStrand	6	1	-15.0546
chr2	89368461	89368480	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	chr16	23110830	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	17	-3.7220
chr7	148587856	148587897	protein_coding	Taldo1	exon	ENSMUSG00000025503	ProperStrand	28	chr2	26493366	26493466	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-5.2032
chr1	114598887	114598977	LINE	Lx	L1	chr1Lx114598849	ProperStrand	1	chr1	114598745	114598825	LINE	Lx3C	L1	chr1Lx3C114598504	ProperStrand	1	1	-inf
chr5	115940304	115940406	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	chr11	97642965	97643080	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	9	-3.7585
chr7	52713409	52713479	protein_coding	Ftl1	utr3	ENSMUSG00000050708	ProperStrand	807	chr16	96747320	96747336	protein_coding	Pcp4	utr3	ENSMUSG00000090223	ProperStrand	2	1	-15.5891
chr10	80555302	80555328	protein_coding	Creb3l3	utr5	ENSMUSG00000035041	ProperStrand	8	chr16	23110456	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-15.0207
chr12	81275517	81275562	protein_coding	Actn1	exon	ENSMUSG00000015143	ProperStrand	128	chr15	58778937	58779006	protein_coding	Mtss1	exon	ENSMUSG00000022353	ProperStrand	68	1	-11.5400
chr19	18663844	18663934	protein_coding	Ostf1	intron	ENSMUSG00000024725	NonProperStrand	2	chr2	158590570	158590650	protein_coding	Ppp1r16b	utr3	ENSMUSG00000037754	NonProperStrand	5	1	-21.6030
chr8	125626940	125627005	snoRNA	ENSMUSG00000064450_Snord68	.	ENSMUSG00000064450	ProperStrand	181	chr11	77996602	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	3	-9.6345
chr1	90598740	90598758	protein_coding	Arl4c	utr5	ENSMUSG00000049866	NonProperStrand	1	chr4	131865855	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	NonProperStrand	39	1	-inf
chr12	114147475	114147502	protein_coding	Jag2	exon	ENSMUSG00000002799	ProperStrand	28	chr3	157729963	157729979	protein_coding	Lrrc40	utr3	ENSMUSG00000063052	ProperStrand	147	1	-13.0576
chr18	64689473	64689489	protein_coding	Atp8b1	utr3	ENSMUSG00000039529	ProperStrand	782	chr16	57391629	57391706	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	1	-5.2209
chr6	121423179	121423195	protein_coding	Iqsec3	utr5	ENSMUSG00000040797	NonProperStrand	139	chr9	15119631	15119713	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.3030
chr10	127563521	127563704	protein_coding	Baz2a	exon	ENSMUSG00000040054	ProperStrand	274	chr1	162967154	162967178	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	3	-13.1109
chr4	116862573	116862663	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	chr11	106362558	106362587	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-3.1167
chr5	100855903	100855939	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr16	8660080	8660116	protein_coding	Carhsp1	utr3	ENSMUSG00000008393	ProperStrand	15	1	-9.4365
chr9	62642569	62642644	protein_coding	Fem1b	utr3	ENSMUSG00000032244	ProperStrand	111	chr7	52381972	52382007	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	2	-8.9966
chr3	108082581	108082658	protein_coding	Psma5	intron	ENSMUSG00000068749	ProperStrand	6	chr4	131908359	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-5.6461
chr2	24825186	24827046	protein_coding	Wdr85	exon	ENSMUSG00000026975	ProperStrand	323	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-5.5943
chr10	21088278	21088378	protein_coding	Hbs1l	utr3	ENSMUSG00000019977	ProperStrand	27	chr5	74489654	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-5.3118
chr7	34993333	34993433	protein_coding-noncoding	Gpi1	utr3	ENSMUSG00000036427	ProperStrand	19	chr16	23110959	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7016
chr13	9833551	9833662	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr17	31784164	31784187	protein_coding	U2af1	exon	ENSMUSG00000061613	ProperStrand	17	2	-12.0299
chr14	25673634	25673651	DNA	MER63D	AcHobo	chr14MER63D25673510	NonProperStrand	65	chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	1	-4.3101
chr2	109158236	109173414	protein_coding	Kif18a	exon	ENSMUSG00000027115	ProperStrand	5	chr10	5989944	5990063	protein_coding	Akap12	utr3	ENSMUSG00000038587	ProperStrand	1008	1	-12.8315
chr16	90386835	90386853	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	chr15	34370545	34370642	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	3	-6.7278
chr17	6232006	6232022	protein_coding	Tulp4	exon	ENSMUSG00000034377	NonProperStrand	265	chr14	37934741	37934760	protein_coding	Ghitm	utr3	ENSMUSG00000041028	NonProperStrand	11	1	-13.7988
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr1	59761657	59761697	snoRNA	ENSMUSG00000089093_Snord11	.	ENSMUSG00000089093	ProperStrand	193	3	-7.1780
chr17	37094546	37094575	protein_coding	Znrd1	exon	ENSMUSG00000036315	ProperStrand	10	chr3	68889191	68889253	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	4	-19.6736
chr12	102029194	102029274	protein_coding	9030617O03Rik	intron	ENSMUSG00000021185	ProperStrand	12	chr2	4528515	4528605	protein_coding	Frmd4a	intron	ENSMUSG00000026657	NonProperStrand	16	1	-19.5274
chr6	94776854	94776876	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	chr17	24857716	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	5	-1.2784
chr1	182507715	182530941	protein_coding	Parp1	exon	ENSMUSG00000026496	ProperStrand	227	chr4	131908689	131908749	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	7	-2.9026
mmu-miR-6240	2	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr4	98276729	98276746	protein_coding	Inadl	intron	ENSMUSG00000061859	ProperStrand	21	1	-8.0023
chr13	55391546	55391563	protein_coding	Nsd1	exon	ENSMUSG00000021488	ProperStrand	186	chr5	150422507	150423131	protein_coding	Hsph1	exon	ENSMUSG00000029657	ProperStrand	16	3	-inf
chr19	10620687	10620703	protein_coding	Cpsf7	utr3	ENSMUSG00000034820	ProperStrand	66	chr2	26493390	26493423	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-3.5658
chr18	77377484	77377506	protein_coding	Pias2	intron	ENSMUSG00000025423	ProperStrand	52	chr4	131865855	131865971	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-5.5248
chr9	42338706	42338725	protein_coding	Grik4	intron	ENSMUSG00000032017	ProperStrand	32	chr5	121655100	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.9473
chr11	116704532	116704548	protein_coding	Jmjd6	utr5	ENSMUSG00000056962	ProperStrand	92	chr16	23111758	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.2679
chr17	39979943	39980002	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr1	24619316	24619406	protein_coding	Gm10222	exon	ENSMUSG00000067736	NonProperStrand	11	1	-10.6733
chr8	3568023	3568039	protein_coding	C330021F23Rik	utr5	ENSMUSG00000065952	NonProperStrand	85	chr9	15119630	15119650	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.0452
chr5	147283151	147283267	protein_coding	Wasf3	utr3	ENSMUSG00000029636	ProperStrand	32	chr16	23110971	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.9468
chr10	66153908	66153998	LTR	MMERVK10C-int	ERVK	chr10MMERVK10C-int66153872	NonProperStrand	1	chr10	95004012	95004278	protein_coding	Ube2n	exon	ENSMUSG00000074781	ProperStrand	10	1	-inf
chr9	32537781	32537798	protein_coding	Ets1	exon	ENSMUSG00000032035	NonProperStrand	7	chr1	89673682	89673782	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-7.5185
chr2	158204003	158204093	snoRNA	ENSMUSG00000065840_SNORA71	.	ENSMUSG00000065840	ProperStrand	107	chr16	23110828	23110992	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-1.8878
chr9	15120942	15121015	snoRNA	ENSMUSG00000065265_SNORA32	.	ENSMUSG00000065265	ProperStrand	101	chr9	15118332	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	4	-9.1031
chr16	4052883	4053481	protein_coding	Trap1	exon	ENSMUSG00000005981	ProperStrand	25	chr17	24857765	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.8692
chr3	130907519	130907541	protein_coding	Lef1	intron	ENSMUSG00000027985	NonProperStrand	5	chr16	23110963	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr11	88798363	88805113	protein_coding	Scpep1	exon	ENSMUSG00000000278	ProperStrand	54	chr18	35714145	35714235	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-3.6373
chr9	122875078	122880870	protein_coding	Kif15	exon	ENSMUSG00000036768	ProperStrand	46	chr4	149012503	149017325	protein_coding	Clstn1	exon	ENSMUSG00000039953	ProperStrand	173	1	-11.7249
chr16	90224646	90225393	protein_coding	Sod1	exon	ENSMUSG00000022982	ProperStrand	75	chr15	37313435	37313452	protein_coding	Ncald	intron	ENSMUSG00000051359	ProperStrand	28	1	-14.4031
chr18	62567495	62567511	protein_coding	Htr4	intron	ENSMUSG00000026322	ProperStrand	18	chr11	6428038	6428088	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.4934
chr11	97889238	97889779	protein_coding	Rpl19	exon	ENSMUSG00000017404	ProperStrand	120	chrX	34622943	34623025	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	4	-7.5582
chr17	26258587	26258987	protein_coding	Tmem8	exon	ENSMUSG00000024180	ProperStrand	10	chr16	90386835	90386853	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	2	-inf
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr3	108357255	108357479	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	12	-13.2308
chr11	33445953	33445994	LTR	MER68	ERVL	chr11MER6833445882	NonProperStrand	2	chr16	23110911	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-inf
chr2	144091855	144091945	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	ProperStrand	549	chr17	26360448	26360528	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	1	-5.6375
chr5	34968239	34968256	protein_coding	Add1	intron	ENSMUSG00000029106	ProperStrand	88	chr2	33175020	33175047	protein_coding	Ralgps1	intron	ENSMUSG00000038831	ProperStrand	75	1	-12.0953
chr1	45863549	45863594	protein_coding	Wdr75	exon	ENSMUSG00000025995	ProperStrand	24	chr9	120038554	120038612	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.7604
chr2	170200171	170200188	antisense	1700040N02Rik	.	ENSMUSG00000086999	ProperStrand	25	chr4	131908444	131908469	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	1	-9.0195
chr5	124804482	124804582	protein_coding	Cdk2ap1	utr5	ENSMUSG00000029394	ProperStrand	22	chr3	123210854	123210917	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.8504
chr7	88674834	88674873	lincRNA	2900076A07Rik	intron	ENSMUSG00000086033	ProperStrand	2	chr7	88674740	88674827	snoRNA	ENSMUSG00000093107_AC167122.1	.	ENSMUSG00000093107	ProperStrand	110	1	-inf
chr15	9784298	9784315	LINE	Lx8	L1	chr15Lx89784083	ProperStrand	5	chr10	23505260	23505279	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-5.7809
chr5	141090405	141090422	protein_coding	Lfng	exon	ENSMUSG00000029570	NonProperStrand	92	chr3	35725890	35725907	protein_coding	Atp11b	exon	ENSMUSG00000037400	NonProperStrand	18	1	-14.8890
chr16	35932589	35932618	protein_coding	Dtx3l	exon	ENSMUSG00000049502	ProperStrand	152	chr18	35716805	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-0.8407
chr11	52638086	52638166	protein_coding	Fstl4	intron	ENSMUSG00000036264	ProperStrand	27	chr15	72824930	72825020	protein_coding	Trappc9	intron	ENSMUSG00000047921	NonProperStrand	53	1	-15.1768
chr6	120314155	120314245	protein_coding	Kdm5a	utr5	ENSMUSG00000030180	ProperStrand	57	chr4	131866176	131866256	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-3.7605
chr15	73381058	73381158	protein_coding	Dennd3	intron	ENSMUSG00000036661	ProperStrand	11	chr12	92811868	92811911	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	1	-12.0318
chr13	97949144	97949162	protein_coding	Gfm2	utr3	ENSMUSG00000021666	ProperStrand	26	chr3	68889052	68889127	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	2	-8.0336
chr7	141399351	141399367	protein_coding	Adam12	intron	ENSMUSG00000054555	NonProperStrand	49	chr11	62418014	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-5.9550
chr13	9172075	9172129	protein_coding	Larp4b	utr3	ENSMUSG00000033499	ProperStrand	53	chr10	23505190	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	6	-10.0348
chr2	105012802	105012818	protein_coding	Wt1	utr3	ENSMUSG00000016458	NonProperStrand	338	chr9	20944282	20944401	protein_coding	Cdc37	exon	ENSMUSG00000019471	NonProperStrand	6	2	-inf
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr10	88412381	88412399	protein_coding	Ano4	utr3	ENSMUSG00000035189	ProperStrand	21	1	-9.9141
chr11	74177267	74177357	LINE	L1M4b	L1	chr11L1M4b74177207	NonProperStrand	1	chr11	74177392	74177482	Low_complexity	CT-rich	Low_complexity	chr11CT-rich74177384	ProperStrand	1	1	-inf
chr17	25249969	25250049	protein_coding	Telo2	exon	ENSMUSG00000024170	ProperStrand	17	chr3	123210884	123210974	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-4.3464
chr5	66029854	66029870	protein_coding	Pds5a	exon	ENSMUSG00000029202	ProperStrand	62	chr5	74489620	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-3.7170
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr7	117166723	117166858	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	3	-1.7347
chr16	5015283	5015373	protein_coding	Glyr1	utr3	ENSMUSG00000022536	ProperStrand	60	chr9	120039540	120039620	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.3187
chr10	86154384	86154474	protein_coding	Hsp90b1	exon	ENSMUSG00000020048	ProperStrand	396	chr10	39978352	39978432	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-2.0182
chr12	16966211	16966311	protein_coding	Rock2	exon	ENSMUSG00000020580	ProperStrand	27	chr7	29136596	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.7994
chr4	116862575	116862662	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	chr9	15118322	15118367	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	3	-1.3594
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr7	117166761	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	5	-2.7173
chr1	135147552	135147568	protein_coding	Plekha6	intron	ENSMUSG00000041757	NonProperStrand	40	chr11	6428089	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.9420
chr8	24284897	24284980	protein_coding	Agpat6	utr3	ENSMUSG00000031545	ProperStrand	11	chr11	62418014	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-8.9791
chr10	61201689	61201708	protein_coding	H2afy2	utr3	ENSMUSG00000020086	ProperStrand	16	chr2	32818841	32818941	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	2	-13.0214
chr12	100972307	100972397	protein_coding	2610021K21Rik	intron	ENSMUSG00000021176	ProperStrand	12	chr16	23110456	23110536	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-13.1124
chr2	179933699	179933724	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr4	141319644	141319733	protein_coding	Dnajc16	exon	ENSMUSG00000040697	ProperStrand	12	1	-12.9792
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr2	130102053	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-0.8448
chr4	56910496	56910581	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	chr11	106362588	106362635	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-0.9610
chr9	57788088	57788105	protein_coding	Sema7a	exon	ENSMUSG00000038264	ProperStrand	43	chr11	55296276	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-6.8405
mmu-miR-6240	4	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr7	53943392	53943410	protein_coding	Saal1	utr3	ENSMUSG00000006763	NonProperStrand	6	1	-10.6285
chr19	43579408	43579425	protein_coding	Got1	intron	ENSMUSG00000025190	NonProperStrand	147	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-7.1404
chr12	72044497	72048490	protein_coding	Actr10	exon	ENSMUSG00000021076	ProperStrand	21	chr10	23505163	23505253	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.9252
chr19	47341506	47341570	protein_coding	Sh3pxd2a	exon	ENSMUSG00000053617	ProperStrand	57	chr19	8799036	8799089	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-5.9334
chr7	26444299	26444390	protein_coding	Exosc5	exon	ENSMUSG00000061286	ProperStrand	16	chr4	131908236	131908276	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.6705
chr13	73463407	73463423	protein_coding	Ndufs6	intron	ENSMUSG00000021606	NonProperStrand	52	chr4	141587614	141587630	protein_coding	Tmem51	exon	ENSMUSG00000040616	ProperStrand	30	1	-15.0135
chr16	4886395	4886411	protein_coding	Mgrn1	exon	ENSMUSG00000022517	NonProperStrand	157	chr14	25314661	25315021	protein_coding	Rps24	utr3	ENSMUSG00000025290	ProperStrand	110	1	-10.1660
chr19	7301109	7301190	protein_coding	Naa40	utr3	ENSMUSG00000024764	ProperStrand	10	chr6	115757092	115757153	protein_coding	Rpl32	exon	ENSMUSG00000057841	ProperStrand	137	6	-20.4526
chr4	151355273	151355307	protein_coding	Dnajc11	utr3	ENSMUSG00000039768	ProperStrand	15	chr12	106269284	106269384	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-6.8702
chr7	107253077	107253094	protein_coding	Pold3	intron	ENSMUSG00000030726	ProperStrand	14	chr2	26768046	26768119	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	2	-17.6759
chr7	90534842	90534932	LINE	L1M5	L1	chr7L1M590534844	NonProperStrand	1	chr18	29619745	29619825	LTR	MTB_Mm-int	MaLR	chr18MTB_Mm-int29619578	NonProperStrand	1	1	-inf
chr18	53884055	53884094	protein_coding	Cep120	exon	ENSMUSG00000048799	ProperStrand	91	chr14	33005145	33005232	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-3.2246
chr5	123257355	123257381	protein_coding	Anapc5	exon	ENSMUSG00000029472	ProperStrand	92	chr9	15118323	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-2.7010
chr14	55084438	55084538	protein_coding	Lrp10	exon	ENSMUSG00000022175	ProperStrand	19	chr16	37777391	37777408	protein_coding	Fstl1	exon	ENSMUSG00000022816	ProperStrand	179	2	-19.7270
chr3	68840049	68840134	protein_coding	Trim59	utr3	ENSMUSG00000034317	ProperStrand	22	chr17	24857729	24857819	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.1130
chr7	53176201	53176217	protein_coding	Emp3	utr5	ENSMUSG00000040212	ProperStrand	6	chr9	15118322	15118356	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-8.0740
chr4	131866172	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	chr5	147646411	147646452	snoRNA	ENSMUSG00000077185_SNORD102	.	ENSMUSG00000077185	ProperStrand	142	1	-2.1498
chr2	181628236	181628256	LTR	MMERGLN-int	ERV1	chr2MMERGLN-int181628172	ProperStrand	1	chr11	6428100	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-inf
chr6	83111671	83111687	protein_coding	1700003E16Rik	exon	ENSMUSG00000030030	ProperStrand	352	chrX	45232653	45232674	protein_coding	Smarca1	utr3	ENSMUSG00000031099	ProperStrand	5	1	-14.9291
chr5	36837889	36837907	protein_coding	Tbc1d14	exon	ENSMUSG00000029192	ProperStrand	25	chr7	116663633	116663767	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.1077
chr14	78363573	78363589	protein_coding	Epsti1	utr3	ENSMUSG00000022014	ProperStrand	2	chr4	131865866	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-8.7800
chr4	117317815	117317899	protein_coding	Eri3	intron	ENSMUSG00000033423	ProperStrand	246	chr8	32260335	32260399	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	11	-19.5512
chr8	91203105	91203188	protein_coding	Nod2	intron	ENSMUSG00000055994	ProperStrand	4	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-6.5415
chr6	91706438	91706483	protein_coding	Slc6a6	utr3	ENSMUSG00000030096	ProperStrand	206	chr7	148634702	148634792	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-1.8312
chr11	23180403	23180438	protein_coding	Xpo1	exon	ENSMUSG00000020290	ProperStrand	123	chr6	97112810	97112888	snoRNA	ENSMUSG00000065728_SNORA36	.	ENSMUSG00000065728	ProperStrand	158	1	-9.9294
chr6	102285963	102285985	protein_coding	Cntn3	intron	ENSMUSG00000030075	ProperStrand	7	chr7	116663633	116663703	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-6.6732
chr17	46285129	46285145	protein_coding	Mad2l1bp	exon	ENSMUSG00000034509	NonProperStrand	67	chr6	115758050	115758132	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-5.2568
chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	chr10	127522345	127522403	snoRNA	ENSMUSG00000093245_AC131120.1	.	ENSMUSG00000093245	ProperStrand	77	1	-8.3296
chr8	77638106	77638155	protein_coding	Mcm5	exon	ENSMUSG00000005410	ProperStrand	199	chr7	118219574	118219618	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-2.0418
chr5	77694585	77694625	protein_coding	Rest	utr5	ENSMUSG00000029249	ProperStrand	136	chrX	34622906	34622982	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-1.7868
chr3	96073861	96073954	protein_coding	Hist2h2bb	exon	ENSMUSG00000050936	ProperStrand	57	chr4	131908689	131908802	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-5.6138
chr1	84692463	84692480	miRNA	Mir5126	.	ENSMUSG00000093254	ProperStrand	15	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-10.9917
chr12	32615793	32615839	protein_coding	Hbp1	exon	ENSMUSG00000002996	ProperStrand	26	chr7	116664814	116664904	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-4.0736
chr2	90235299	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	38433950	38433968	protein_coding	Zfp536	intron	ENSMUSG00000043456	ProperStrand	57	1	-4.5608
chr4	106111701	106111717	protein_coding	Usp24	utr3	ENSMUSG00000028514	ProperStrand	74	chr19	9052161	9052177	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	1	-9.0437
chr8	72287172	72287188	protein_coding	Zfp866	utr3	ENSMUSG00000043090	NonProperStrand	134	chr1	89673704	89673783	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-1.8898
chr5	125061288	125062699	protein_coding	Tctn2	exon	ENSMUSG00000029386	ProperStrand	4	chr7	29136541	29136621	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-7.7378
chr14	76920368	76920384	lincRNA	4930444M15Rik	exon	ENSMUSG00000085974	NonProperStrand	14	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-8.1240
chr17	69573538	69573555	protein_coding	Epb4.1l3	intron	ENSMUSG00000024044	ProperStrand	28	chr2	158185608	158185653	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-8.0097
chr7	31580479	31580496	SINE	B4A	B4	chr7B4A31580462	NonProperStrand	1	chr3	88881084	88881100	protein_coding	Ash1l	utr3	ENSMUSG00000028053	NonProperStrand	50	1	-inf
chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	chr19	5677490	5677690	protein_coding	Pcnxl3	exon	ENSMUSG00000054874	ProperStrand	96	1	-8.4563
chr9	44142821	44143244	protein_coding	H2afx	utr5	ENSMUSG00000049932	ProperStrand	137	chr4	131908727	131908807	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-1.4506
chr4	131908752	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	chr5	125884616	125884638	tRNA	tRNA1317-AlaTGC	.	253642	ProperStrand	149	3	-1.2671
chr12	117596376	117596394	protein_coding	Esyt2	exon	ENSMUSG00000021171	NonProperStrand	6	chr3	152042505	152042524	protein_coding	Usp33	exon	ENSMUSG00000025437	ProperStrand	11	1	-18.8087
chr9	57385425	57385441	protein_coding	2310046O06Rik	utr5	ENSMUSG00000032305	ProperStrand	135	chr3	108357258	108357312	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-3.0352
chr11	76781472	76781527	protein_coding	Blmh	intron	ENSMUSG00000020840	ProperStrand	70	chr8	73419657	73419712	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.8554
chr11	98829398	98829479	protein_coding	Rara	exon	ENSMUSG00000037992	ProperStrand	37	chr16	23110986	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.7935
chr3	130035142	130035163	protein_coding	Col25a1	intron	ENSMUSG00000058897	ProperStrand	27	chr1	162967519	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.9934
chr8	90765113	90765146	protein_coding	Papd5	intron	ENSMUSG00000036779	ProperStrand	32	chr11	5180669	5180685	protein_coding	Znrf3	utr3	ENSMUSG00000041961	NonProperStrand	210	1	-12.0710
chr8	74013367	74013451	protein_coding-noncoding	Gtpbp3	utr5	ENSMUSG00000007610	ProperStrand	1	chr17	24857815	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-inf
chr8	113348066	113348166	protein_coding	Sf3b3	exon	ENSMUSG00000033732	ProperStrand	181	chr17	35087894	35087962	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	7	-inf
chr9	113571623	113580962	protein_coding	Pdcd6ip	exon	ENSMUSG00000032504	ProperStrand	53	chr13	30338189	30338206	protein_coding	Mboat1	utr3	ENSMUSG00000038732	NonProperStrand	148	2	-18.1873
chr16	12066821	12066839	protein_coding	Shisa9	intron	ENSMUSG00000022494	NonProperStrand	8	chr17	23955820	23955838	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	1	-15.6112
chr5	135853479	135853569	protein_coding	Pom121	utr3	ENSMUSG00000053293	ProperStrand	127	chr16	23110458	23110538	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.2922
chr5	123353443	123353511	protein_coding	Kdm2b	intron	ENSMUSG00000029475	ProperStrand	30	chr9	120037937	120038027	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	2	-9.8796
chr2	72243878	72243894	protein_coding	B230120H23Rik	utr3	ENSMUSG00000004085	NonProperStrand	26	chr8	18802281	18802297	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-11.0592
chr14	32072879	32072901	protein_coding	Bap1	utr3	ENSMUSG00000021901	ProperStrand	12	chr2	165633497	165633587	protein_coding	Zmynd8	intron	ENSMUSG00000039671	NonProperStrand	23	1	-18.1338
chr19	3851699	3851716	processed_transcript	Gm16066	.	ENSMUSG00000082848	NonProperStrand	11	chr10	79756529	79756547	protein_coding	Rps15	exon	ENSMUSG00000063457	ProperStrand	119	1	-15.4169
chr7	52590795	52590812	protein_coding	Hrc	utr5	ENSMUSG00000038239	NonProperStrand	2	chr16	23111389	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-8.0851
chr11	59300781	59300820	protein_coding	Zkscan17	exon	ENSMUSG00000020472	ProperStrand	23	chr15	82971462	82971479	protein_coding	Poldip3	intron	ENSMUSG00000041815	ProperStrand	57	1	-15.3331
chr10	127569696	127569785	protein_coding	Rbms2	utr3	ENSMUSG00000040043	ProperStrand	26	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	4	-inf
chr11	95824508	95824573	protein_coding	Igf2bp1	utr3	ENSMUSG00000013415	ProperStrand	140	chrX	34622905	34622968	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	4	-6.8638
chr11	3152796	3154596	protein_coding	Drg1	exon	ENSMUSG00000020457	ProperStrand	19	chr19	8799831	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-7.2272
chr4	135327523	135329683	protein_coding	Myom3	exon	ENSMUSG00000037139	NonProperStrand	62	chr7	117182717	117182749	protein_coding	Ipo7	exon	ENSMUSG00000066232	ProperStrand	2121	1	-6.1446
chr2	90235284	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	96921526	96921543	protein_coding	Osbpl7	exon	ENSMUSG00000038534	ProperStrand	15	1	-7.2074
chr9	48793555	48793588	protein_coding	Usp28	utr5	ENSMUSG00000032267	ProperStrand	63	chr1	39605590	39605696	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-7.2467
chr1	134401005	134401021	protein_coding	Rbbp5	utr3	ENSMUSG00000026439	NonProperStrand	33	chr7	17080678	17080759	protein_coding	Grlf1	utr3	ENSMUSG00000058230	ProperStrand	38	3	-19.4758
chr15	97584254	97584270	protein_coding	Rapgef3	exon	ENSMUSG00000022469	ProperStrand	19	chr2	22444765	22444787	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-10.1001
chr1	63225627	63225705	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	chr8	98269959	98270084	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	5	-3.0586
chr2	155389005	155393599	protein_coding	Gss	utr3	ENSMUSG00000027610	ProperStrand	5	chr16	23110917	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-11.1940
chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	chr7	67123708	67123759	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	3	-13.1828
chr11	117716584	117716628	protein_coding	Birc5	utr3	ENSMUSG00000017716	ProperStrand	16	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.9771
chr3	37750806	37750824	LINE	L1_Mus3	L1	chr3L1_Mus337750762	ProperStrand	38	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.4538
chr5	147396397	147396413	protein_coding	Gpr12	utr5	ENSMUSG00000041468	ProperStrand	15	chr11	6428055	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	4	-18.4335
chr16	33865610	33865645	protein_coding	Itgb5	exon	ENSMUSG00000022817	ProperStrand	49	chr4	131866154	131866244	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	3	-9.8569
chr7	137681717	137681761	protein_coding	Nsmce4a	exon	ENSMUSG00000040331	ProperStrand	14	chr5	130300420	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-8.7013
chr9	64024976	64024998	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	chr3	95980309	95980359	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-2.8917
chr2	25147920	25147939	protein_coding	Grin1	exon	ENSMUSG00000026959	ProperStrand	9	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-11.9671
chr19	22926633	22926664	protein_coding	Trpm3	intron	ENSMUSG00000052387	ProperStrand	54	chr17	35089182	35089224	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-5.6915
chr17	56451523	56451539	protein_coding	Uhrf1	exon	ENSMUSG00000001228	NonProperStrand	3	chr18	33010118	33011670	protein_coding	Wdr36	exon	ENSMUSG00000038299	ProperStrand	28	2	-inf
chr11	88794773	88794863	protein_coding	Scpep1	exon	ENSMUSG00000000278	ProperStrand	54	chr10	110918554	110918634	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-3.6432
chr9	110702001	110702091	protein_coding	Prss42	intron	ENSMUSG00000044664	ProperStrand	3	chr11	97643001	97643081	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-8.5513
chr7	30562359	30562425	protein_coding	Zfp84	exon	ENSMUSG00000046185	ProperStrand	1	chr11	69483190	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-inf
chr1	33828651	33828669	protein_coding	Zfp451	intron	ENSMUSG00000042197	NonProperStrand	393	chr19	8799830	8799883	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	2	-2.9936
chr11	99885311	99885327	protein_coding	Krt33b	exon	ENSMUSG00000057723	NonProperStrand	352	chr3	108357255	108357355	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-1.4673
chr2	89368463	89368480	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	chr1	162968265	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-3.9620
chr15	5098643	5098664	protein_coding	Prkaa1	intron	ENSMUSG00000050697	ProperStrand	10	chr1	162967547	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-6.9960
chr9	40611945	40611965	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr8	23674609	23676095	protein_coding	Slc20a2	exon	ENSMUSG00000037656	ProperStrand	63	1	-8.0414
chr11	72886876	72886898	protein_coding	1200014J11Rik	exon	ENSMUSG00000020783	ProperStrand	11	chr7	116664872	116664925	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-5.7738
chr5	108330951	108331086	protein_coding	Rpl5	exon	ENSMUSG00000058558	ProperStrand	235	chr1	59761635	59761704	snoRNA	ENSMUSG00000089093_Snord11	.	ENSMUSG00000089093	ProperStrand	193	4	-inf
chr9	64023293	64023329	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	chr5	108336363	108336435	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-0.8335
chr12	56811354	56811444	protein_coding	Ralgapa1	intron	ENSMUSG00000021027	ProperStrand	9	chr11	6519851	6519931	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-11.8227
chr9	45666581	45666671	protein_coding	Bace1	intron	ENSMUSG00000032086	NonProperStrand	11	chr9	120038561	120038641	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-6.3233
chr8	126457398	126459992	protein_coding	Nup133	exon	ENSMUSG00000039509	ProperStrand	59	chr11	68886954	68887032	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	4	-13.4656
chr15	99073763	99073794	protein_coding	Mcrs1	exon	ENSMUSG00000037570	ProperStrand	46	chr7	116664794	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-7.7254
chr15	8254421	8254453	protein_coding	Nipbl	intron	ENSMUSG00000022141	ProperStrand	45	chr8	73419681	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.6573
chrX	142219003	142219079	LINE	L1Md_A	L1	chrXL1Md_A142214888	NonProperStrand	1	chr17	24857767	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-inf
chr7	31225294	31226077	protein_coding	Aplp1	exon	ENSMUSG00000006651	ProperStrand	29	chr1	174313489	174313549	protein_coding	Pigm	utr3	ENSMUSG00000050229	ProperStrand	7	3	-inf
chr9	120859829	120860044	protein_coding	Ctnnb1	exon	ENSMUSG00000006932	ProperStrand	214	chr7	29136612	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	5	-4.5160
chr17	45704938	45705038	protein_coding	Hsp90ab1	utr3	ENSMUSG00000023944	ProperStrand	1627	chr1	63225679	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-0.8940
chr5	39062717	39062811	protein_coding	Zfp518b	exon	ENSMUSG00000046572	ProperStrand	95	chr19	8798507	8798554	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-4.3282
chr19	8800354	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	chr5	108336363	108336497	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	40	-12.2639
chr2	26493373	26493473	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr13	90238586	90238723	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	2	-0.8194
chrX	90827379	90827395	protein_coding	Pola1	exon	ENSMUSG00000006678	ProperStrand	83	chr13	69770178	69770418	protein_coding	Nsun2	exon	ENSMUSG00000021595	ProperStrand	110	1	-11.4433
chr16	18283302	18283319	protein_coding	Dgcr8	exon	ENSMUSG00000022718	ProperStrand	67	chr19	8798484	8798550	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-4.9975
chr2	79843543	79843559	protein_coding	Pde1a	intron	ENSMUSG00000059173	NonProperStrand	275	chr1	9932561	9932626	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-4.7430
chr10	75322454	75322561	protein_coding	Mif	exon	ENSMUSG00000033307	ProperStrand	146	chr1	88247742	88247778	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	9	-inf
chrX	135868870	135871374	protein_coding	Trap1a	exon	ENSMUSG00000051257	ProperStrand	66	chr17	24857717	24857797	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.1388
chr17	8542310	8542328	protein_coding	Sft2d1	intron	ENSMUSG00000073468	ProperStrand	30	chr16	23111775	23111803	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.0878
chr7	117189863	117189934	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr18	75161534	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	2	-1.8030
chr9	114471365	114472704	protein_coding	Trim71	intron	ENSMUSG00000079259	ProperStrand	162	chr3	123210873	123210981	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-1.4572
chr3	146418660	146420696	protein_coding	Prkacb	exon	ENSMUSG00000005034	ProperStrand	15	chr5	130300460	130300540	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-5.1031
chr18	16907675	16907693	protein_coding	Cdh2	intron	ENSMUSG00000024304	ProperStrand	71	chr9	15119630	15119759	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.3421
chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	chr10	23505152	23505285	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-1.4997
chr6	83111671	83111687	protein_coding	1700003E16Rik	exon	ENSMUSG00000030030	ProperStrand	352	chr5	115939533	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-4.4034
chr10	55916630	55918249	protein_coding	D630037F22Rik	exon	ENSMUSG00000038122	ProperStrand	4	chr15	79913288	79913319	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-9.1208
chr19	36189752	36189768	protein_coding	Ankrd1	exon	ENSMUSG00000024803	ProperStrand	11	chr9	15119744	15119766	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.8656
chr11	102023995	102024043	protein_coding	Lsm12	utr3	ENSMUSG00000020922	ProperStrand	28	chr2	130102056	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-6.8646
chr3	33699183	33699201	protein_coding	Ttc14	utr5	ENSMUSG00000027677	ProperStrand	25	chr11	69481335	69481428	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-4.8537
chr15	98604924	98606960	protein_coding	Wnt10b	exon	ENSMUSG00000022996	NonProperStrand	189	chr19	23239300	23239356	protein_coding	Klf9	exon	ENSMUSG00000033863	ProperStrand	83	1	-10.3595
chr11	100480853	100480933	protein_coding	Dnajc7	utr5	ENSMUSG00000014195	ProperStrand	49	chr8	13876136	13876226	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-7.5477
chr3	152058715	152058732	protein_coding	Zzz3	intron	ENSMUSG00000039068	ProperStrand	26	chr11	6428089	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.7683
chr6	124762477	124762653	protein_coding	Tpi1	exon	ENSMUSG00000023456	ProperStrand	94	chr3	123210891	123210971	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.3802
chr5	133504436	133504516	LTR	ORR1B1	MaLR	chr5ORR1B1133504437	NonProperStrand	1	chr5	133504315	133504405	SINE	B4	B4	chr5B4133504317	NonProperStrand	1	1	-inf
chr3	89823153	89823177	protein_coding	Ubap2l	exon	ENSMUSG00000042520	ProperStrand	88	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-5.0954
chr3	11580450	11580467	LINE	Lx3A	L1	chr3Lx3A11580299	ProperStrand	53	chr14	64112639	64112698	protein_coding	Tdh	exon	ENSMUSG00000021953	ProperStrand	67	1	-13.3410
chr4	43505781	43505871	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr10	80128340	80128414	protein_coding	Mknk2	utr3	ENSMUSG00000020190	ProperStrand	18	3	-12.7001
chr2	94253272	94253313	protein_coding	Api5	utr3	ENSMUSG00000027193	ProperStrand	51	chr10	23505178	23505268	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-4.3338
chr11	102296427	102296606	protein_coding	Grn	exon	ENSMUSG00000034708	ProperStrand	43	chr5	74489543	74489623	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-4.4078
chr3	107881611	107881672	protein_coding	Ampd2	exon	ENSMUSG00000027889	ProperStrand	10	chr7	116664794	116664868	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-5.9693
chr13	23830909	23830999	protein_coding	Hist1h1c	exon	ENSMUSG00000036181	ProperStrand	99	chr9	15118284	15118364	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	5	-11.8388
chr8	125005761	125005826	protein_coding	Ctu2	utr3	ENSMUSG00000049482	ProperStrand	21	chr1	130110477	130110495	protein_coding	R3hdm1	intron	ENSMUSG00000056211	ProperStrand	43	2	-inf
chrX	94051768	94051785	LTR	RLTR10A	ERVK	chrXRLTR10A94051771	NonProperStrand	1	chr17	27957134	27957185	protein_coding	D17Wsu92e	exon	ENSMUSG00000056692	ProperStrand	61	1	-inf
chr10	6450631	6450649	protein_coding	Plekhg1	intron	ENSMUSG00000040624	NonProperStrand	75	chr18	73693110	73693132	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-5.0897
chr7	116664793	116664852	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	chr8	18933077	18933093	snoRNA	ENSMUSG00000088420_SNORA70	.	ENSMUSG00000088420	ProperStrand	12	1	-5.5966
chr11	77678970	77679041	protein_coding	Myo18a	utr3	ENSMUSG00000000631	ProperStrand	124	chr17	35089181	35089239	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-4.0911
chr10	45205242	45205302	protein_coding	Lin28b	utr5	ENSMUSG00000063804	ProperStrand	26	chr1	9932550	9932621	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	9	-19.8004
chr11	116714148	116714217	protein_coding	Srsf2	exon	ENSMUSG00000034120	ProperStrand	132	chr5	74489586	74489674	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-2.3722
chr19	5609827	5609844	protein_coding	Kat5	intron	ENSMUSG00000024926	ProperStrand	20	chr8	74845028	74845111	protein_coding	Klf2	utr3	ENSMUSG00000055148	ProperStrand	82	1	-14.9159
chr8	129468746	129468881	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	chr1	89673553	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	31	-1.5073
chr7	125289016	125289041	protein_coding	Smg1	exon	ENSMUSG00000030655	ProperStrand	70	chr11	68886965	68887033	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	2	-6.4997
chr19	5758623	5758693	protein_coding	Scyl1	exon	ENSMUSG00000024941	ProperStrand	59	chr16	23111396	23111486	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.2821
chr4	131908685	131908736	lincRNA	Gm17300	intron	ENSMUSG00000091021	ProperStrand	109	chr1	63225588	63225614	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	NonProperStrand	3	1	-18.5322
chr16	85455530	85455620	protein_coding	Cyyr1	utr3	ENSMUSG00000041134	ProperStrand	1	chr2	130101987	130102067	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-inf
chr16	23115839	23115855	protein_coding	Rfc4	exon	ENSMUSG00000022881	ProperStrand	2	chr17	45705306	45705355	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	1	-14.1811
chr2	92224418	92224434	protein_coding	Mapk8ip1	utr3	ENSMUSG00000027223	ProperStrand	501	chr19	46406070	46406253	protein_coding	Cuedc2	exon	ENSMUSG00000036748	ProperStrand	12	3	-inf
chr11	8220839	8220919	LTR	RLTR10B	ERVK	chr11RLTR10B8220667	ProperStrand	1	chr1	100075300	100075390	SINE	B4A	B4	chr1B4A100075193	NonProperStrand	1	1	-inf
chr16	57391761	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr2	131037158	131038184	protein_coding	2310035K24Rik	exon	ENSMUSG00000068264	ProperStrand	2	1	-15.2659
chr18	10052129	10052153	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chrX	83547356	83547372	protein_coding	Mageb4	intron	ENSMUSG00000035427	NonProperStrand	191	1	-6.4990
chr18	85129532	85129556	protein_coding	Fbxo15	exon	ENSMUSG00000034391	ProperStrand	23	chr13	20374830	20374847	protein_coding	Elmo1	exon	ENSMUSG00000041112	NonProperStrand	34	1	-16.3632
chr1	185857228	185857244	protein_coding	1700056E22Rik	exon	ENSMUSG00000044854	ProperStrand	173	chr8	13876107	13876155	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-5.0655
chr8	77648714	77648767	protein_coding	Mcm5	exon	ENSMUSG00000005410	ProperStrand	199	chr11	116535916	116535982	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	4	-11.9291
chr9	40611241	40611273	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr18	12172461	12172477	protein_coding	6030446N20Rik	intron	ENSMUSG00000049411	ProperStrand	235	1	-5.4434
chr11	103125629	103125649	protein_coding	Map3k14	intron	ENSMUSG00000020941	NonProperStrand	18	chr5	74489582	74489672	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-6.1191
chr12	119301895	119301912	protein_coding	Dnahc11	intron	ENSMUSG00000018581	ProperStrand	65	chr7	19722633	19722649	protein_coding	Fbxo46	utr3	ENSMUSG00000050428	NonProperStrand	24	1	-15.0029
chr13	28653437	28700391	lincRNA	2610307P16Rik	exon	ENSMUSG00000085936	ProperStrand	154	chr7	116664814	116664866	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.1023
chr5	99443584	99443601	protein_coding	Prkg2	intron	ENSMUSG00000029334	NonProperStrand	57	chr9	120038466	120038551	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.1312
chr6	37864857	37864874	protein_coding	Trim24	intron	ENSMUSG00000029833	NonProperStrand	3	chr7	53334911	53336767	protein_coding	Nomo1	exon	ENSMUSG00000030835	ProperStrand	85	1	-19.2176
chr12	33536838	33536870	protein_coding	Nampt	utr3	ENSMUSG00000020572	ProperStrand	15	chr11	87240269	87240383	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	1	-13.8129
chr17	23955820	23955839	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	chr10	11063464	11063480	protein_coding	Epm2a	exon	ENSMUSG00000055493	ProperStrand	28	1	-13.0177
chr16	23110465	23110560	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	chr16	32243856	32243943	snoRNA	ENSMUSG00000080440_SNORA79	.	ENSMUSG00000080440	ProperStrand	140	3	-3.5867
chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	chr7	117166721	117166781	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-1.2611
chr7	36423451	36423525	protein_coding	Ankrd27	utr3	ENSMUSG00000034867	ProperStrand	132	chr18	35716681	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	8	-11.9761
chr6	116355784	116355874	protein_coding-noncoding	March8	utr5	ENSMUSG00000025702	NonProperStrand	1	chr6	116356121	116356201	protein_coding	March8	exon	ENSMUSG00000025702	NonProperStrand	1	1	-inf
chr1	133252342	133252452	protein_coding	Srgap2	intron	ENSMUSG00000026425	ProperStrand	299	chr16	23110828	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	14	-1.3852
chr1	130327415	130327482	LTR	MTA_Mm	MaLR	chr1MTA_Mm130327316	ProperStrand	1	chr6	125782259	125782277	protein_coding	Ano2	intron	ENSMUSG00000038115	NonProperStrand	3	1	-inf
chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-1.6117
chr4	124721478	124721512	protein_coding	Gnl2	exon	ENSMUSG00000028869	ProperStrand	23	chr16	17210492	17210512	protein_coding	Rimbp3	exon	ENSMUSG00000071636	ProperStrand	67	1	-15.0191
chr12	57636058	57637309	protein_coding	Nkx2-1	utr5	ENSMUSG00000001496	NonProperStrand	5	chr11	69483139	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	4	-19.4782
chr5	66008420	66008507	protein_coding	Pds5a	intron	ENSMUSG00000029202	ProperStrand	62	chr2	145077956	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	2	-12.2582
chr3	67244108	67244145	protein_coding	Gfm1	exon	ENSMUSG00000027774	ProperStrand	31	chr8	73419657	73419729	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-10.5589
chr17	13137334	13139184	protein_coding	Acat2	exon	ENSMUSG00000023832	ProperStrand	8	chr3	123210854	123210917	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	5	-20.1287
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr7	148634762	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-0.8240
chr8	108400425	108400471	protein_coding	Nutf2	exon	ENSMUSG00000008450	ProperStrand	39	chr2	26768368	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	3	-14.7524
chr6	125271587	125271603	protein_coding	Scnn1a	utr5	ENSMUSG00000030340	ProperStrand	10	chr2	79843543	79843559	protein_coding	Pde1a	intron	ENSMUSG00000059173	NonProperStrand	275	1	-13.9329
chr10	80949963	80950063	protein_coding	Ncln	utr3	ENSMUSG00000020238	ProperStrand	18	chr10	23505152	23505205	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.2069
chr11	69480632	69480648	protein_coding	Eif4a1	utr3	ENSMUSG00000059796	ProperStrand	108	chr7	116663633	116663710	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.5667
chr7	52381256	52381272	protein_coding	Rpl13a	utr3	ENSMUSG00000074129	NonProperStrand	3	chr17	35089228	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-11.8056
chr1	84740580	84741307	protein_coding	Trip12	exon	ENSMUSG00000026219	ProperStrand	248	chr15	79913301	79913322	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	3	-3.7843
chr2	120359364	120359454	protein_coding	Zfp106	exon	ENSMUSG00000027288	ProperStrand	199	chr13	34221181	34222083	protein_coding	Tubb2b	exon	ENSMUSG00000045136	ProperStrand	49	1	-11.3168
chr17	47604805	47604821	protein_coding	AI661453	exon	ENSMUSG00000034382	NonProperStrand	38	chr10	80773487	80773504	protein_coding	Pip5k1c	exon	ENSMUSG00000034902	NonProperStrand	6	1	-18.4297
chr9	120037898	120037988	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	chr7	67125763	67125827	snoRNA	ENSMUSG00000089375_Snord107	.	ENSMUSG00000089375	ProperStrand	451	4	-5.3555
chr6	124363621	124363711	protein_coding	Pex5	exon	ENSMUSG00000005069	ProperStrand	27	chrX	12733706	12733786	protein_coding	Usp9x	exon	ENSMUSG00000031010	ProperStrand	174	1	-12.7929
chr11	120671970	120672041	protein_coding	Fasn	exon	ENSMUSG00000025153	ProperStrand	298	chr2	90525286	90525324	protein_coding	Nup160	exon	ENSMUSG00000051329	ProperStrand	49	1	-10.5091
chr2	167836657	167836685	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	chr2	6324701	6324718	protein_coding	Usp6nl	intron	ENSMUSG00000039046	NonProperStrand	6	1	-16.8565
chr5	77738902	77738918	protein_coding	Noa1	exon	ENSMUSG00000036285	ProperStrand	147	chr13	44991807	44997600	protein_coding	Jarid2	exon	ENSMUSG00000038518	ProperStrand	372	1	-7.8672
chr1	93897961	93898039	protein_coding	Hdac4	intron	ENSMUSG00000026313	ProperStrand	27	chr10	23505152	23505204	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-9.1491
chr19	8799580	8799646	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	chr18	35714144	35714277	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	11	-2.6031
chr11	102732387	102732477	protein_coding	Eftud2	exon	ENSMUSG00000020929	ProperStrand	86	chr15	98350203	98350283	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-4.0747
chr2	31308193	31308212	protein_coding	Hmcn2	intron	ENSMUSG00000055632	NonProperStrand	11	chr3	123210922	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-8.6907
chr7	28146782	28146798	protein_coding	Spnb4	exon	ENSMUSG00000011751	NonProperStrand	84	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-6.3168
chr11	80176220	80176320	protein_coding	5730455P16Rik	utr3	ENSMUSG00000057181	ProperStrand	28	chr7	116663715	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.8921
chr1	137271110	137271126	protein_coding	Shisa4	exon	ENSMUSG00000041889	ProperStrand	64	chr16	23111704	23111737	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.8017
chr18	75161365	75161388	protein_coding	Rpl17	exon	ENSMUSG00000062328	ProperStrand	90	chr11	69483136	69483202	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-3.2779
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr5	122580412	122584741	protein_coding	Ccdc63	utr5	ENSMUSG00000043036	ProperStrand	120	1	-6.4198
chr12	111931288	111931345	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr16	57391761	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	2	-5.0829
chr4	138604298	138604314	protein_coding	Tmco4	intron	ENSMUSG00000041143	NonProperStrand	4	chr10	23505559	23505625	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-13.2148
chr13	56197582	56205752	protein_coding	H2afy	exon	ENSMUSG00000015937	ProperStrand	103	chr14	31827477	31827497	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-5.8782
chr9	15119968	15120033	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	chr15	5068405	5068478	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	2	-1.7074
chr2	26768049	26768106	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	chr10	90581049	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-0.7610
chr9	96096868	96219031	protein_coding	Tfdp2	utr3	ENSMUSG00000032411	ProperStrand	95	chr16	23111373	23111475	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-1.4548
chr1	23852599	23852681	protein_coding	Smap1	utr3	ENSMUSG00000026155	ProperStrand	10	chr16	23110964	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-5.0079
chr14	76247711	76247844	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	chr5	74489562	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	24	-0.8738
chr9	78023121	78023144	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr18	67807785	67807844	protein_coding	Psmg2	exon	ENSMUSG00000024537	ProperStrand	13	1	-8.9596
chr16	23111372	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	chr4	56910495	56910629	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	54	-4.6678
chr3	95700349	95700439	protein_coding	Aph1a	utr3	ENSMUSG00000015750	ProperStrand	11	chr16	91624626	91624706	protein_coding	Gart	exon	ENSMUSG00000022962	ProperStrand	200	1	-14.3606
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr11	6498122	6498279	protein_coding	Nacad	exon	ENSMUSG00000041073	ProperStrand	3	1	-14.9656
chr11	12154087	12304464	protein_coding	Cobl	exon	ENSMUSG00000020173	ProperStrand	133	chr17	13112482	13112578	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	2	-5.3302
chr7	105983624	105983640	protein_coding	Wnt11	utr5	ENSMUSG00000015957	ProperStrand	14	chr4	131908713	131908750	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.6665
chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	chr12	60235124	60235180	snoRNA	ENSMUSG00000077505_SNORA26	.	ENSMUSG00000077505	ProperStrand	82	1	-9.2053
chr15	88169622	88169639	LINE	Lx7	L1	chr15Lx788166416	NonProperStrand	1	chr13	24565395	24565422	protein_coding	Cmah	utr3	ENSMUSG00000016756	NonProperStrand	53	1	-inf
chr11	100338087	100338154	protein_coding	Acly	utr3	ENSMUSG00000020917	ProperStrand	183	chr7	52378398	52378460	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	1	-6.2904
chr11	55301045	55302593	protein_coding	G3bp1	exon	ENSMUSG00000018583	ProperStrand	106	chr9	120038587	120038667	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.0648
chr8	124320874	124321779	protein_coding	Klhdc4	exon	ENSMUSG00000040263	ProperStrand	13	chr1	88247742	88247795	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-8.1588
chrX	133652932	133653008	protein_coding	Esx1	exon	ENSMUSG00000023443	ProperStrand	1	chr2	144106347	144106364	protein_coding	8430406I07Rik	utr3	ENSMUSG00000027424	ProperStrand	43	1	-inf
chr16	44734750	44734790	protein_coding	BC027231	exon	ENSMUSG00000036208	ProperStrand	4	chr7	38354919	38354935	protein_coding	Zfp536	exon	ENSMUSG00000043456	NonProperStrand	236	1	-16.2001
chr15	43326309	43326719	protein_coding	Ttc35	exon	ENSMUSG00000022337	ProperStrand	2	chr14	93575981	93575998	protein_coding	Pcdh9	intron	ENSMUSG00000055421	ProperStrand	59	1	-inf
chr18	34963674	34967943	protein_coding	Kdm3b	exon	ENSMUSG00000038773	ProperStrand	80	chr4	131908270	131908296	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.0291
chr2	143640707	143640723	protein_coding	Pcsk2	utr3	ENSMUSG00000027419	ProperStrand	16	chr14	32989534	32989664	protein_coding	Ncoa4	exon	ENSMUSG00000056234	ProperStrand	15	2	-inf
chr5	114865641	114865695	protein_coding	Ube3b	exon	ENSMUSG00000029577	ProperStrand	26	chr3	68889024	68889124	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-4.8370
chr4	138932881	138932919	protein_coding	C230096C10Rik	utr3	ENSMUSG00000078517	ProperStrand	69	chr4	131908809	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.0398
chr12	112781804	112781846	protein_coding	Eif5	exon	ENSMUSG00000021282	ProperStrand	125	chr15	98356776	98356812	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	1	-6.2986
chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	chr8	124406215	124406255	protein_coding	Slc7a5	utr3	ENSMUSG00000040010	ProperStrand	166	1	-7.2446
chr2	181098802	181098916	protein_coding-noncoding	Arfrp1	utr3	ENSMUSG00000038671	ProperStrand	5	chr2	41199972	41199989	protein_coding	Lrp1b	exon	ENSMUSG00000049252	ProperStrand	376	1	-14.7937
chr13	34219217	34219317	protein_coding	Tubb2b	utr3	ENSMUSG00000045136	ProperStrand	49	chr1	162966004	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-3.9815
chr10	119146573	119146590	protein_coding	Grip1	intron	ENSMUSG00000034813	ProperStrand	38	chr4	131865855	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.5179
chr7	54110423	54110496	protein_coding	Ldha	exon	ENSMUSG00000063229	ProperStrand	280	chr18	35714144	35714234	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-0.9843
chr4	24555745	24555764	protein_coding	Klhl32	intron	ENSMUSG00000040387	ProperStrand	67	chr3	123210854	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.8893
chr8	13173668	13173854	protein_coding	Lamp1	exon	ENSMUSG00000031447	ProperStrand	92	chr12	44844129	44844157	snoRNA	ENSMUSG00000065004_SNORA33	.	ENSMUSG00000065004	ProperStrand	111	1	-11.2187
chr19	3262257	3262344	protein_coding	Ighmbp2	utr3	ENSMUSG00000024831	NonProperStrand	4	chr7	116663631	116663731	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	NonProperStrand	51	1	-23.8405
chr4	116961934	116962024	protein_coding	Rnf220	utr5	ENSMUSG00000028677	ProperStrand	131	chr5	121655017	121655097	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.3574
chr15	76477766	76489998	protein_coding	Cyhr1	exon	ENSMUSG00000053929	ProperStrand	16	chr16	23110836	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-5.6614
chr1	34489983	34490001	miRNA	Mir5103	.	ENSMUSG00000092852	NonProperStrand	24	chr2	130102033	130102057	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-7.1746
chr8	72613823	72613839	protein_coding	Hapln4	utr3	ENSMUSG00000007594	NonProperStrand	85	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-8.2296
chr15	102301141	102301231	protein_coding	Pcbp2	utr5	ENSMUSG00000056851	ProperStrand	164	chr4	131865395	131865475	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-2.2110
chr7	19736714	19737892	protein_coding	Snrpd2	exon	ENSMUSG00000040824	ProperStrand	23	chr8	73419654	73419712	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-8.2006
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr10	90581034	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	2	-0.9819
chr5	31522867	31522883	protein_coding	Ppm1g	utr5	ENSMUSG00000029147	ProperStrand	69	chr7	116664819	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.3115
chr16	90225499	90226430	protein_coding	Sod1	exon	ENSMUSG00000022982	ProperStrand	75	chr4	131908357	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.1121
chr17	35281674	35281925	protein_coding	Bag6	exon	ENSMUSG00000024392	ProperStrand	181	chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	1	-7.8674
chr4	42995464	42995516	protein_coding	Vcp	exon	ENSMUSG00000028452	ProperStrand	108	chr13	21259940	21259978	tRNA	tRNA1000-LysTTT	.	1277944	ProperStrand	86	1	-11.4090
chr6	48546015	48546035	protein_coding	Repin1	intron	ENSMUSG00000052751	ProperStrand	4	chr3	108228259	108228275	protein_coding	Sars	utr3	ENSMUSG00000068739	NonProperStrand	200	1	-16.5220
chr7	16534823	16534839	protein_coding	Ehd2	utr3	ENSMUSG00000074364	NonProperStrand	197	chr9	120039551	120039623	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	3	-4.0467
chr8	13014869	13014885	protein_coding	Mcf2l	exon	ENSMUSG00000031442	NonProperStrand	35	chr1	89673636	89673726	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	5	-17.4671
mmu-miR-1949	7	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr7	13433355	13433757	protein_coding	Zfp110	exon	ENSMUSG00000058638	ProperStrand	6	1	-12.9026
chr6	45965480	46120177	protein_coding	Cntnap2	exon	ENSMUSG00000039419	NonProperStrand	283	chr1	93263065	93263081	protein_coding	Fam132b	exon	ENSMUSG00000047443	NonProperStrand	98	1	-9.2202
chr17	27244769	27244801	protein_coding	Itpr3	exon	ENSMUSG00000042644	ProperStrand	137	chr16	23111453	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-0.8382
chr15	98421727	98421820	protein_coding	Adcy6	utr3	ENSMUSG00000022994	ProperStrand	50	chr17	23958089	23958122	protein_coding	Srrm2	utr3	ENSMUSG00000039218	ProperStrand	521	1	-9.3532
chr7	134671388	134671517	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	chr2	158182156	158182270	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	4	-3.2205
chr15	102266060	102266076	protein_coding	Sp1	utr3	ENSMUSG00000001280	ProperStrand	124	chr17	31133313	31133329	protein_coding	Umodl1	exon	ENSMUSG00000054134	ProperStrand	24	1	-13.7160
chr6	6774063	6774080	antisense	Dlx6as1	.	ENSMUSG00000090063	NonProperStrand	2	chr6	83111671	83111687	protein_coding	1700003E16Rik	exon	ENSMUSG00000030030	ProperStrand	352	1	-17.3153
chr19	6410763	6410791	processed_transcript	Gm14965	.	ENSMUSG00000084876	ProperStrand	1	chr11	48614367	48614412	snoRNA	ENSMUSG00000064500_SNORD95	.	ENSMUSG00000064500	ProperStrand	100	1	-inf
chr3	31347217	31347242	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int31346640	NonProperStrand	2	chr10	92154786	92154806	protein_coding	Nedd1	intron	ENSMUSG00000019988	ProperStrand	7	1	-inf
chr7	26581896	26581986	LINE	L1MC5	L1	chr7L1MC526581823	ProperStrand	1	chr7	26581618	26581708	LTR	RLTR14	ERV1	chr7RLTR1426581485	NonProperStrand	1	1	-inf
chr2	52548479	52548519	protein_coding	Stam2	utr3	ENSMUSG00000055371	ProperStrand	9	chr11	106362336	106362381	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	3	-inf
chr4	53873597	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	chr11	6519819	6519927	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-3.7962
chr2	146125209	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	chr6	127059528	127059545	protein_coding	9630033F20Rik	utr5	ENSMUSG00000038028	ProperStrand	10	1	-14.7318
chr5	34894211	34894227	protein_coding	Sh3bp2	utr5	ENSMUSG00000054520	ProperStrand	43	chr5	27342525	27342543	protein_coding	Dpp6	intron	ENSMUSG00000061576	ProperStrand	35	1	-15.0909
chr16	91623725	91624640	protein_coding	Gart	exon	ENSMUSG00000022962	ProperStrand	200	chr11	69481397	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-1.2478
chr7	11075314	11075331	protein_coding	Zik1	exon	ENSMUSG00000030393	ProperStrand	11	chr17	35299507	35299642	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	7	-20.0222
chr11	120818253	120818324	protein_coding	Slc16a3	exon	ENSMUSG00000025161	ProperStrand	98	chr4	122970410	122970510	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-6.4418
chr12	75040647	75041335	protein_coding	Hif1a	exon	ENSMUSG00000021109	ProperStrand	20	chr7	119994144	119994177	protein_coding	Tead1	intron	ENSMUSG00000055320	ProperStrand	217	1	-12.9650
chr17	35089115	35089309	processed_transcript	1110038B12Rik	.	ENSMUSG00000092203	NonProperStrand	3	chr16	4632030	4632055	protein_coding	Coro7	exon	ENSMUSG00000039637	ProperStrand	25	1	-inf
chr15	98673388	98673415	protein_coding	Mll2	intron	ENSMUSG00000048154	ProperStrand	170	chr17	35087927	35087947	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-3.2381
chr15	80066303	80066377	protein_coding	Smcr7l	utr5	ENSMUSG00000022412	ProperStrand	19	chr16	30514154	30514171	protein_coding	Tmem44	utr3	ENSMUSG00000022537	ProperStrand	217	1	-13.0711
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr13	108873107	108873126	protein_coding	Ndufaf2	intron	ENSMUSG00000068184	NonProperStrand	29	1	-10.3712
chr15	58775416	58775496	protein_coding	Mtss1	exon	ENSMUSG00000022353	ProperStrand	68	chr5	116005151	116005241	protein_coding	Pxn	utr3	ENSMUSG00000029528	ProperStrand	171	1	-10.9598
chr8	4289627	4289674	protein_coding	Elavl1	exon	ENSMUSG00000040028	ProperStrand	39	chr14	76247742	76247842	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-4.9994
chr16	55931840	55931930	protein_coding	Cep97	intron	ENSMUSG00000022604	ProperStrand	22	chr18	35716714	35716794	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-13.1666
chr17	33982361	33982382	protein_coding	Cd320	intron	ENSMUSG00000002308	ProperStrand	8	chr16	23111371	23111429	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.8232
chr1	192712615	192712631	protein_coding	Rps6kc1	exon	ENSMUSG00000089872	ProperStrand	241	chr11	6428088	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-0.9986
chr2	90235285	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	10280565	10280581	protein_coding	1810006K21Rik	utr5	ENSMUSG00000036372	NonProperStrand	3	1	-10.7414
chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	NonProperStrand	91	chr7	52381972	52382013	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	NonProperStrand	2	1	-inf
chr3	107472115	107472180	protein_coding-noncoding	Ahcyl1	utr3	ENSMUSG00000027893	ProperStrand	1	chr2	3371450	3371540	protein_coding	Dclre1c	intron	ENSMUSG00000026648	ProperStrand	8	1	-inf
chr13	55067638	55067655	protein_coding	Unc5a	intron	ENSMUSG00000025876	NonProperStrand	96	chr15	71624749	71624797	snoRNA	ENSMUSG00000088895_SNORA81	.	ENSMUSG00000088895	ProperStrand	348	1	-8.8494
chr12	114290175	114290191	protein_coding	Pacs2	intron	ENSMUSG00000021143	NonProperStrand	302	chr14	76247725	76247787	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-1.4079
chr7	126864070	126864170	protein_coding	Thumpd1	exon	ENSMUSG00000030942	ProperStrand	14	chr11	99885311	99885327	protein_coding	Krt33b	exon	ENSMUSG00000057723	NonProperStrand	352	2	-inf
chr7	67880922	67880939	LINE	Lx4A	L1	chr7Lx4A67880840	ProperStrand	1	chr1	162965980	162965998	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-inf
chr13	30000539	30000639	protein_coding	E2f3	utr3	ENSMUSG00000016477	ProperStrand	8	chr1	162967539	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-7.4644
chr13	9833552	9833663	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr11	32635307	32635329	protein_coding	Fbxw11	exon	ENSMUSG00000020271	NonProperStrand	31	1	-6.2512
chr12	53009129	53009219	protein_coding	Heatr5a	intron	ENSMUSG00000035181	ProperStrand	21	chr12	76964410	76964500	protein_coding	Syne2	intron	ENSMUSG00000063450	NonProperStrand	17	1	-17.8889
chr4	106770704	106770721	protein_coding	Cdcp2	intron	ENSMUSG00000047636	NonProperStrand	35	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.2830
chr7	20222895	20222995	protein_coding	Clptm1	exon	ENSMUSG00000002981	ProperStrand	109	chr14	76247781	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-3.0707
chr10	83014709	83014762	protein_coding	A230046K03Rik	intron	ENSMUSG00000034560	NonProperStrand	2	chr7	118219574	118219626	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-11.5289
chr18	56912403	56912449	protein_coding	Lmnb1	utr3	ENSMUSG00000024590	ProperStrand	176	chr7	116664793	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	6	-7.6560
chr4	43505730	43505820	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr14	20959406	20959432	protein_coding	Kcnk5	utr3	ENSMUSG00000023243	ProperStrand	29	10	-inf
chr9	105370128	105372404	protein_coding	Atp2c1	exon	ENSMUSG00000032570	ProperStrand	21	chrX	84483705	84483756	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-10.3706
chr17	27649644	27649660	protein_coding	Grm4	intron	ENSMUSG00000063239	ProperStrand	147	chr2	144087414	144087462	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-4.7961
chr7	121559885	121559901	protein_coding	Pde3b	exon	ENSMUSG00000030671	NonProperStrand	1	chr16	23110939	23110960	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr2	166888789	166889217	protein_coding	1500012F01Rik	utr5	ENSMUSG00000074578	ProperStrand	14	chr9	120039577	120039622	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	4	-19.3500
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr5	147646795	147646849	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	1	-2.6808
chr5	100855902	100855943	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr10	127527158	127527213	protein_coding	Atp5b	utr3	ENSMUSG00000025393	ProperStrand	612	3	-6.1100
chr5	74489202	74489276	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chrX	40944841	40944857	protein_coding	Gm362	exon	ENSMUSG00000078320	ProperStrand	129	1	-4.1488
chr7	17040701	17040717	protein_coding	Tmem160	exon	ENSMUSG00000019158	ProperStrand	55	chr4	131865855	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.9045
chr15	76698180	76698198	protein_coding	Zfp251	intron	ENSMUSG00000022526	ProperStrand	2	chr4	131908689	131908810	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-8.0336
chr15	29471226	29471243	LINE	Lx4B	L1	chr15Lx4B29471206	ProperStrand	16	chr4	154345109	154345504	protein_coding	Pank4	exon	ENSMUSG00000029056	ProperStrand	15	1	-19.5060
chr9	65888970	65889037	protein_coding	Csnk1g1	utr3	ENSMUSG00000032384	ProperStrand	31	chr11	69483238	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-9.0570
chr5	136208669	136209398	protein_coding	Por	exon	ENSMUSG00000005514	ProperStrand	42	chr7	116664843	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	4	-10.9211
chr10	76516143	76516910	protein_coding	Col18a1	exon	ENSMUSG00000001435	ProperStrand	287	chr7	150717298	150717425	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	5	-11.8283
chr13	51743569	51743659	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	chr12	88778629	88778709	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-0.8697
chr8	3516535	3516552	protein_coding	Pnpla6	utr5	ENSMUSG00000004565	ProperStrand	60	chr5	121655016	121655099	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.7476
chr17	34470786	34470808	protein_coding	H2-Eb2	intron	ENSMUSG00000067341	NonProperStrand	17	chr11	68886975	68887037	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-6.6196
chr4	43505740	43505862	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr8	59990752	59992945	protein_coding	Hmgb2	utr3	ENSMUSG00000054717	ProperStrand	184	2	-2.4153
chr5	65210079	65210095	protein_coding	Klf3	intron	ENSMUSG00000029178	ProperStrand	56	chr1	162965531	162965550	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.4021
chr4	32598933	32598949	protein_coding	Bach2	intron	ENSMUSG00000040270	ProperStrand	14	chr17	35299507	35299528	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-7.6757
chr2	51960457	51960484	protein_coding	Rif1	intron	ENSMUSG00000036202	ProperStrand	201	chr10	110918636	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-1.4324
chr16	13332970	13332987	protein_coding	Mkl2	utr3	ENSMUSG00000009569	ProperStrand	55	chr15	99055310	99055330	protein_coding	Kcnh3	utr5	ENSMUSG00000037579	ProperStrand	24	1	-15.3219
chr10	110918548	110918648	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	NonProperStrand	10	chr18	35714144	35714219	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	NonProperStrand	47	1	-17.7383
chr6	128313065	128313083	protein_coding	Foxm1	utr5	ENSMUSG00000001517	NonProperStrand	66	chr12	113978728	113978776	protein_coding	AW555464	intron	ENSMUSG00000072825	ProperStrand	96	1	-12.1773
chr9	20986244	20995840	protein_coding	Pde4a	exon	ENSMUSG00000032177	ProperStrand	11	chr10	39978273	39978353	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-8.8788
chr7	116559837	116559855	protein_coding	Stk33	intron	ENSMUSG00000031027	ProperStrand	2	chr11	69481335	69481388	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-10.4764
chr5	46247419	46247509	protein_coding	Lcorl	intron	ENSMUSG00000015882	ProperStrand	15	chr9	106567058	106567138	protein_coding	Tex264	intron	ENSMUSG00000040813	ProperStrand	18	1	-18.6475
chr18	50337653	50338702	protein_coding	Hsd17b4	exon	ENSMUSG00000024507	ProperStrand	19	chr9	15119632	15119696	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.7702
chr10	82112313	82112335	protein_coding	Tdg	utr3	ENSMUSG00000034674	ProperStrand	42	chr16	23110455	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.0882
chr4	111928995	111929011	protein_coding	Skint3	intron	ENSMUSG00000070868	NonProperStrand	48	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-6.3080
chr2	179322380	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	1	-7.7393
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr12	17552950	17553040	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	3	-6.4387
chr2	167468882	167468972	protein_coding	Tmem189	utr3	ENSMUSG00000090213	ProperStrand	6	chr18	33954842	33954922	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-8.1162
chr4	137074348	137095095	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	chr5	130300419	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	18	-10.2096
chr11	106934399	106934416	protein_coding	Bptf	exon	ENSMUSG00000040481	ProperStrand	70	chr4	131908753	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.0215
chr5	130465954	130469330	protein_coding	Gusb	exon	ENSMUSG00000025534	ProperStrand	16	chr2	147011593	147011610	protein_coding	Nkx2-2	exon	ENSMUSG00000027434	ProperStrand	47	3	-inf
chr16	23111369	23111510	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr16	23111372	23111505	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	13	-2.6151
chr6	142336812	142336862	protein_coding	Golt1b	intron	ENSMUSG00000030245	ProperStrand	7	chr4	131908254	131908344	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-5.3201
chrX	71262493	71262509	protein_coding	Irak1	exon	ENSMUSG00000031392	ProperStrand	12	chr19	8799830	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	3	-18.1694
chr4	131908816	131908894	lincRNA	Gm17300	exon	ENSMUSG00000091021	ProperStrand	109	chr12	17552972	17553072	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	NonProperStrand	16	1	-14.8049
chr8	87200857	87200887	protein_coding	Nacc1	exon	ENSMUSG00000001910	ProperStrand	130	chr11	115999916	115999932	protein_coding	Mrpl38	exon	ENSMUSG00000020775	NonProperStrand	65	1	-11.5995
chr19	47145522	47145622	protein_coding	Taf5	exon	ENSMUSG00000025049	ProperStrand	5	chr2	145076805	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-12.8805
chr5	30062571	30074899	protein_coding	Dnajb6	utr5	ENSMUSG00000029131	ProperStrand	81	chr10	110918658	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-2.9073
chr19	5719336	5719352	protein_coding	Ehbp1l1	exon	ENSMUSG00000024937	ProperStrand	75	chr9	15119633	15119693	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.2505
chr13	54180983	54184348	protein_coding	Sfxn1	exon	ENSMUSG00000021474	ProperStrand	18	chr9	15119732	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.8766
chr3	100629490	100629507	protein_coding	Vtcn1	exon	ENSMUSG00000051076	ProperStrand	4	chr1	183083923	183086056	protein_coding	Cnih4	exon	ENSMUSG00000062169	ProperStrand	5	1	-20.6224
chr7	150409340	150409418	protein_coding	Kcnq1	intron	ENSMUSG00000009545	ProperStrand	59	chr3	123210853	123210912	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-5.7344
chr5	118635062	118635079	protein_coding	Hrk	utr3	ENSMUSG00000046607	NonProperStrand	6	chr4	131908690	131908750	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-9.0955
chr11	100239442	100239493	protein_coding	Jup	exon	ENSMUSG00000001552	ProperStrand	123	chr14	124353869	124353886	protein_coding	Itgbl1	exon	ENSMUSG00000032925	ProperStrand	159	1	-9.9168
chr1	154687244	154687271	protein_coding	Smg7	exon	ENSMUSG00000042772	ProperStrand	88	chr8	73419681	73419782	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-6.5030
chr18	73628440	73628520	LTR	MT2A	ERVL	chr18MT2A73628240	ProperStrand	1	chr18	73628730	73628820	LTR	MTB	MaLR	chr18MTB73628671	ProperStrand	1	1	-inf
chrX	49967185	49967202	antisense	A630012P03Rik	.	ENSMUSG00000055110	ProperStrand	10	chr7	29136554	29136575	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.7572
chr11	70022097	70022202	LTR	RMER15-int	ERVL	chr11RMER15-int70021698	ProperStrand	4	chr10	79755224	79755531	protein_coding	Rps15	exon	ENSMUSG00000063457	ProperStrand	119	1	-17.5158
chr5	31371215	31374251	protein_coding	Cad	exon	ENSMUSG00000013629	ProperStrand	260	chr11	6428035	6428164	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-2.9606
chr3	137083865	137083882	protein_coding-noncoding	Emcn	utr5	ENSMUSG00000054690	NonProperStrand	1	chr19	8963027	8963085	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-inf
chr1	158609101	158609181	protein_coding	Fam20b	utr3	ENSMUSG00000033557	ProperStrand	15	chr1	88247780	88247870	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-7.8641
chr11	106362669	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	chr17	24856620	24856720	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-1.1693
chr11	22736642	22736732	protein_coding	Commd1	utr3	ENSMUSG00000051355	ProperStrand	36	chr17	13112471	13112551	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-5.5727
chr17	32677174	32677264	protein_coding	Cyp4f16	intron	ENSMUSG00000048440	ProperStrand	8	chr16	23110926	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	8	-inf
chr10	121242090	121244926	protein_coding	Srgap1	exon	ENSMUSG00000020121	NonProperStrand	80	chr4	116827118	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-6.4701
chr2	60563159	60563249	LINE	L1Md_F2	L1	chr2L1Md_F260563139	ProperStrand	1	chr3	20282072	20282162	LINE	L1_Mm	L1	chr3L1_Mm20281411	ProperStrand	1	1	-inf
chr3	132368556	132368572	protein_coding	Tbck	exon	ENSMUSG00000028030	NonProperStrand	4	chr2	130101985	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	2	-17.6190
chr3	85941940	85943070	protein_coding	Rps3a	exon	ENSMUSG00000028081	ProperStrand	177	chr18	35714145	35714263	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-2.9905
chr9	78215904	78215948	protein_coding	Dppa5a	utr5	ENSMUSG00000060461	ProperStrand	79	chr16	23111770	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.4838
chrX	72214248	72214264	protein_coding-noncoding	Gab3	utr3	ENSMUSG00000032750	ProperStrand	420	chr7	30972017	30972070	protein_coding	Capns1	utr3	ENSMUSG00000001794	ProperStrand	35	1	-10.5030
chr5	74489295	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr13	46809099	46809133	protein_coding	Nup153	exon	ENSMUSG00000021374	ProperStrand	69	1	-5.3489
chr6	71832550	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	chr10	23505559	23505621	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	5	-5.1526
chr12	17290805	17290837	protein_coding	Pdia6	utr3	ENSMUSG00000020571	ProperStrand	114	chr4	102236212	102236229	protein_coding	Pde4b	intron	ENSMUSG00000028525	ProperStrand	35	1	-13.1132
chr12	31579167	31579220	protein_coding	Acp1	utr3	ENSMUSG00000044573	ProperStrand	12	chr1	162965548	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-6.4045
chr5	121655017	121655126	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	chr13	75905619	75905648	snoRNA	ENSMUSG00000077449_SNORA42	.	ENSMUSG00000077449	ProperStrand	26	4	-16.6822
chr1	12868926	12869016	protein_coding-noncoding	Slco5a1	utr3	ENSMUSG00000025938	ProperStrand	1	chr1	12869276	12869356	protein_coding	Slco5a1	exon	ENSMUSG00000025938	ProperStrand	11	1	-inf
chr11	51413225	51413268	protein_coding	Hnrnpab	intron	ENSMUSG00000020358	ProperStrand	124	chr19	8798507	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-6.4502
chr8	96833517	96833562	protein_coding	Nup93	exon	ENSMUSG00000032939	ProperStrand	43	chrX	34622906	34622990	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	6	-23.5157
chr11	116704523	116704539	protein_coding	Jmjd6	utr5	ENSMUSG00000056962	ProperStrand	92	chr17	39985569	39985627	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-5.0979
chrX	19977247	19977263	protein_coding	Rp2h	utr3	ENSMUSG00000060090	NonProperStrand	2	chr15	82980136	82980189	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-14.5989
chr11	68775853	68775911	LTR	RLTRETN_Mm	ERVK	chr11RLTRETN_Mm68775767	ProperStrand	1	chr4	86494953	86494975	protein_coding	Dennd4c	utr3	ENSMUSG00000038024	ProperStrand	42	1	-inf
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr6	100182218	100182267	protein_coding	Rybp	exon	ENSMUSG00000072872	ProperStrand	51	1	-6.6911
chr5	100389709	100389749	protein_coding	Hnrnpd	utr3	ENSMUSG00000000568	ProperStrand	33	chr10	63242732	63242832	protein_coding	Ctnna3	intron	ENSMUSG00000060843	NonProperStrand	22	6	-inf
chr1	26428851	26428931	LINE	L1Md_F2	L1	chr1L1Md_F226428719	ProperStrand	1	chr1	27029944	27030034	LINE	L1Md_F2	L1	chr1L1Md_F227029411	ProperStrand	1	1	-inf
chr4	33333283	33333328	protein_coding	Pnrc1	exon	ENSMUSG00000040128	ProperStrand	27	chr4	131865393	131865483	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-5.5455
chr7	117189863	117189920	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr5	111121060	111121126	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	4	-2.8489
chr6	113441939	113441981	protein_coding	Creld1	exon	ENSMUSG00000030284	ProperStrand	4	chr10	23505152	23505268	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-6.2798
chr2	90850705	90852915	protein_coding	Celf1	exon	ENSMUSG00000005506	ProperStrand	61	chr3	123210853	123210933	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-5.6138
chr8	126370339	126370398	protein_coding	1700054N08Rik	intron	ENSMUSG00000031971	ProperStrand	2	chr12	82764493	82764511	protein_coding	Ttc9	intron	ENSMUSG00000042734	NonProperStrand	8	1	-19.9311
chr5	125518279	125518331	protein_coding	Ncor2	exon	ENSMUSG00000029478	ProperStrand	377	chr7	117166740	117166830	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-1.5785
chr7	29611030	29611046	protein_coding	Ech1	exon	ENSMUSG00000053898	NonProperStrand	2	chr4	131865855	131865902	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-inf
chr7	137315147	137316371	protein_coding	Fgfr2	exon	ENSMUSG00000030849	ProperStrand	100	chr11	77995185	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-5.1835
chr12	87856911	87856995	protein_coding	Esrrb	intron	ENSMUSG00000021255	ProperStrand	254	chr10	43172499	43172515	protein_coding	Pdss2	intron	ENSMUSG00000038240	ProperStrand	6	1	-15.1669
chr3	95748176	95748246	protein_coding-noncoding	Anp32e	utr5	ENSMUSG00000015749	ProperStrand	2	chr16	23110900	23110990	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr9	78023131	78023192	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr11	99342226	99342242	protein_coding	Krt23	exon	ENSMUSG00000006777	NonProperStrand	1	1	-inf
chr3	107920369	107920469	protein_coding	Gnai3	intron	ENSMUSG00000000001	ProperStrand	48	chr10	110918593	110918694	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	20	-21.2499
chr10	21719014	21719124	protein_coding	Sgk1	utr3	ENSMUSG00000019970	ProperStrand	55	chr11	74718963	74719007	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	1	-9.2001
chr10	6063958	6063976	protein_coding	Akap12	intron	ENSMUSG00000038587	ProperStrand	1008	chrX	132805996	132806059	protein_coding	Ngfrap1	exon	ENSMUSG00000046432	ProperStrand	28	1	-9.2085
chr2	158182156	158182180	lincRNA	9430008C03Rik	intron	ENSMUSG00000085385	ProperStrand	1039	chr19	29720466	29720544	protein_coding	Ermp1	exon	ENSMUSG00000046324	ProperStrand	103	1	-6.5430
chr15	85223922	85268587	protein_coding	Atxn10	exon	ENSMUSG00000016541	ProperStrand	96	chr4	131908236	131908286	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-1.6544
chr18	60850877	60851618	protein_coding	Ndst1	exon	ENSMUSG00000054008	ProperStrand	38	chr19	8798525	8798554	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-6.1084
chr9	39358287	39358304	protein_coding	Olfr958	exon	ENSMUSG00000050853	NonProperStrand	266	chr7	117190016	117190045	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-0.9726
chr1	129953991	129954041	protein_coding	Zranb3	intron	ENSMUSG00000036086	ProperStrand	19	chr12	88779009	88779058	protein_coding	Alkbh1	intron	ENSMUSG00000079036	ProperStrand	70	2	-20.6227
chr7	150717310	150717422	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	chr2	130101984	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	5	-0.8997
chr10	60811360	60811392	protein_coding	X99384	exon	ENSMUSG00000020092	ProperStrand	60	chr11	120347051	120349421	protein_coding	Mrpl12	exon	ENSMUSG00000039640	ProperStrand	49	1	-13.7272
chr6	146991382	146991398	protein_coding	Mrps35	exon	ENSMUSG00000040112	NonProperStrand	27	chr14	33005038	33005061	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-5.5365
chr5	74489203	74489293	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr3	103802600	103802678	protein_coding	Phtf1	exon	ENSMUSG00000058388	ProperStrand	19	1	-7.9189
chr4	3762671	3762739	protein_coding	Rps20	utr5	ENSMUSG00000028234	ProperStrand	71	chr17	35088971	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-5.5379
chr7	53050036	53050054	protein_coding	Lmtk3	exon	ENSMUSG00000062044	NonProperStrand	9	chr9	120039533	120039657	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-7.0468
chr2	158182156	158182180	lincRNA	9430008C03Rik	intron	ENSMUSG00000085385	ProperStrand	1039	chr10	75819782	75819874	protein_coding	Pcnt	exon	ENSMUSG00000001151	ProperStrand	127	5	-19.1204
chr12	17552939	17552971	protein_coding	Odc1	intron	ENSMUSG00000011179	ProperStrand	173	chr1	89681243	89681333	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-3.4317
chr9	14366594	14366610	protein_coding	Amotl1	exon	ENSMUSG00000013076	ProperStrand	72	chr9	20870704	20870756	protein_coding	Zglp1	exon	ENSMUSG00000079681	ProperStrand	1	1	-inf
chr15	13741572	13741662	LINE	Lx3A	L1	chr15Lx3A13741487	ProperStrand	1	chr17	94238820	94238910	LINE	Lx3_Mus	L1	chr17Lx3_Mus94238385	ProperStrand	1	1	-inf
chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	chr1	164635022	164635077	protein_coding	Prrc2c	exon	ENSMUSG00000040225	ProperStrand	413	1	-6.7738
chr5	151755616	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr1	162968448	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	2	-2.2375
chr5	120889875	120889892	protein_coding	Lhx5	intron	ENSMUSG00000029595	NonProperStrand	106	chrX	71589886	71589907	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	1	-9.0077
chr4	55010540	55010653	protein_coding	Zfp462	intron	ENSMUSG00000060206	ProperStrand	37	chr16	23110965	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.7935
chr7	34992750	34992767	protein_coding	Gpi1	exon	ENSMUSG00000036427	NonProperStrand	40	chr17	24856620	24856753	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-7.2336
chr4	140813317	140813333	protein_coding	Arhgef19	utr3	ENSMUSG00000028919	NonProperStrand	12	chr9	15130953	15130982	snoRNA	ENSMUSG00000077394_snoU2_19	.	ENSMUSG00000077394	ProperStrand	96	1	-15.6517
chr3	96132423	96132514	snRNA	ENSMUSG00000075978_U1	.	ENSMUSG00000075978	ProperStrand	132	chr5	130300419	130300469	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.2777
chr1	20922259	20922275	protein_coding	Paqr8	utr5	ENSMUSG00000025931	NonProperStrand	60	chr3	123210853	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.0663
chr2	73041001	73041087	protein_coding	Ola1	intron	ENSMUSG00000027108	ProperStrand	17	chrX	34622905	34622942	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	4	-17.4589
chr3	34549925	34550015	protein_coding	Sox2	exon	ENSMUSG00000074637	ProperStrand	299	chr11	69481351	69481431	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-0.7515
chr2	31139298	31139336	protein_coding	Ncs1	intron	ENSMUSG00000062661	ProperStrand	6	chr4	131865379	131865451	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	2	-14.0331
chr7	50075941	50077734	protein_coding	Gm2381	exon	ENSMUSG00000092225	ProperStrand	9	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-8.1084
chr15	98356774	98356913	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	chr3	123210853	123210985	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	19	-5.7715
chr7	134018730	134018820	protein_coding	Taok2	intron	ENSMUSG00000059981	ProperStrand	47	chr16	23111402	23111482	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.6112
chr16	18239935	18239963	protein_coding	Ranbp1	utr3	ENSMUSG00000005732	ProperStrand	22	chr11	98817652	98817668	protein_coding	Rara	intron	ENSMUSG00000037992	ProperStrand	37	1	-16.3335
chr8	12385780	12385796	protein_coding	Gm5607	utr5	ENSMUSG00000047935	ProperStrand	11	chr5	108334263	108334328	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-8.2190
chr15	30013416	30013468	LTR	RLTR31A_Mm	ERVK	chr15RLTR31A_Mm30012959	NonProperStrand	12	chr7	116663634	116663740	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	12	-inf
chr1	134896102	134896143	protein_coding	Mdm4	intron	ENSMUSG00000054387	ProperStrand	95	chr6	124665498	124665523	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	1	-6.0261
chr3	157729963	157729979	protein_coding	Lrrc40	utr3	ENSMUSG00000063052	ProperStrand	147	chr1	88247816	88247864	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-3.4048
chr6	83105563	83105580	protein_coding-noncoding	Wdr54	utr3	ENSMUSG00000030032	NonProperStrand	10	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-6.7807
chr9	63042015	63042031	protein_coding	Map2k5	exon	ENSMUSG00000058444	ProperStrand	193	chr4	131865855	131865977	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-0.8458
chr7	138686871	138687489	protein_coding	Fgfr2	intron	ENSMUSG00000030849	ProperStrand	100	chr9	46004142	46006314	protein_coding	Sik3	exon	ENSMUSG00000034135	ProperStrand	49	5	-inf
chr14	68203212	68203228	LINE	L1M4c	L1	chr14L1M4c68203191	ProperStrand	4	chr19	8963052	8963083	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-7.6308
chr10	7644669	7675613	protein_coding	Tab2	utr5	ENSMUSG00000015755	ProperStrand	41	chr10	23505559	23505615	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-8.3125
chr15	84768836	84770095	protein_coding	Nup50	exon	ENSMUSG00000016619	ProperStrand	39	chr18	35714193	35714273	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.2497
chr6	70794803	70794820	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chrX	20447401	20447417	protein_coding	Syn1	intron	ENSMUSG00000037217	ProperStrand	9	1	-15.3104
chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	chr1	88247813	88247834	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-1.6571
chr7	108971290	108971306	protein_coding	Inppl1	utr3	ENSMUSG00000032737	ProperStrand	272	chr8	113527896	113527961	protein_coding	Ddx19b	utr3	ENSMUSG00000033658	ProperStrand	30	1	-11.6841
chr13	51743567	51743659	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	chr13	22006767	22006814	tRNA	tRNA85-LeuCAA	.	236059	ProperStrand	54	4	-inf
chr6	118675700	118675718	protein_coding	Cacna1c	intron	ENSMUSG00000051331	ProperStrand	46	chr1	162965529	162965584	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.7662
chr4	43505766	43505846	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr1	63492688	63492778	protein_coding	Adam23	utr5	ENSMUSG00000025964	ProperStrand	59	1	-3.1005
chr2	26493366	26493483	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr2	130103751	130103783	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	3	-1.2808
chr6	113103050	113103072	protein_coding	Setd5	utr3	ENSMUSG00000034269	ProperStrand	162	chr3	67161283	67161299	protein_coding	Rsrc1	utr3	ENSMUSG00000034544	NonProperStrand	71	1	-10.9816
chr2	93873534	93873574	protein_coding	Hsd17b12	utr3	ENSMUSG00000027195	ProperStrand	28	chr17	35089220	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-6.9955
chr4	18020485	18020501	protein_coding	Mmp16	exon	ENSMUSG00000028226	ProperStrand	55	chr9	15119631	15119675	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.7815
chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr1	162967734	162967783	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	1	-1.1012
chr2	68288226	68288306	protein_coding	Stk39	intron	ENSMUSG00000027030	NonProperStrand	9	chr2	68813979	68814069	protein_coding	Lass6	intron	ENSMUSG00000027035	NonProperStrand	4	1	-19.7249
chr9	45963498	45963548	protein_coding	Sik3	exon	ENSMUSG00000034135	ProperStrand	49	chr1	55146019	55147588	protein_coding	Hspe1	exon	ENSMUSG00000073676	ProperStrand	31	1	-15.0524
chr3	151888507	151888533	protein_coding	Fubp1	intron	ENSMUSG00000028034	ProperStrand	56	chr9	21172538	21192183	protein_coding	Ilf3	utr5	ENSMUSG00000032178	ProperStrand	164	1	-11.4346
chr1	38090893	38092893	protein_coding	Eif5b	exon	ENSMUSG00000026083	ProperStrand	118	chr10	80851220	80851260	protein_coding	Dohh	intron	ENSMUSG00000078440	ProperStrand	26	1	-13.6480
chr7	20506351	20506405	protein_coding	Pvr	utr5	ENSMUSG00000040511	ProperStrand	4	chr10	117227045	117227061	protein_coding	Nup107	exon	ENSMUSG00000052798	NonProperStrand	66	1	-18.4974
chr9	48241068	48241084	DNA	Cheshire	MER1_type	chr9Cheshire48240856	ProperStrand	17	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-14.2512
chr7	118187227	118187393	protein_coding	Ctr9	exon	ENSMUSG00000005609	ProperStrand	21	chr10	23505204	23505253	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-5.1197
chr11	106552422	106552460	protein_coding	Pecam1	exon	ENSMUSG00000020717	ProperStrand	56	chr18	35716835	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.2842
chr8	125980677	125982259	protein_coding	Def8	exon	ENSMUSG00000001482	ProperStrand	19	chr13	55105923	55105939	protein_coding	Unc5a	exon	ENSMUSG00000025876	NonProperStrand	96	1	-14.7067
chr1	162966009	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	chr1	59761106	59761140	snoRNA	ENSMUSG00000089512_SNORD11	.	ENSMUSG00000089512	ProperStrand	43	2	-7.0852
chr7	91791916	91791943	protein_coding	Zfand6	intron	ENSMUSG00000030629	ProperStrand	11	chr4	131865856	131865987	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-11.8308
chr16	11144153	11144231	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr11	74133379	74133414	rRNA	n-R5s71	.	ENSMUSG00000070178	NonProperStrand	2	1	-18.2639
chr14	76246534	76246573	protein_coding	Tpt1	exon	ENSMUSG00000060126	ProperStrand	236	chr2	26494709	26494777	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-0.9658
chr2	11155785	11155802	protein_coding	Prkcq	intron	ENSMUSG00000026778	NonProperStrand	6	chr8	97355757	97355792	protein_coding	Ciapin1	exon	ENSMUSG00000031781	ProperStrand	24	1	-18.6952
chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	chr2	26768049	26768102	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	1	-1.4457
chr5	31370782	31370882	protein_coding	Cad	exon	ENSMUSG00000013629	ProperStrand	260	chr16	3856858	3856876	protein_coding	Zfp174	utr3	ENSMUSG00000054939	NonProperStrand	166	1	-8.3371
chr11	45129540	45129557	LINE	L1ME2z	L1	chr11L1ME2z45129530	ProperStrand	1	chr2	90235314	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	1	-inf
chrX	19683228	19683244	protein_coding	Slc9a7	exon	ENSMUSG00000037341	NonProperStrand	136	chr2	32819086	32819261	protein_coding	Rpl12	exon	ENSMUSG00000038900	ProperStrand	167	1	-9.6177
chr1	63360458	63360475	protein_coding	Zdbf2	utr3	ENSMUSG00000027520	NonProperStrand	20	chr4	131908363	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.2521
chr11	116535464	116535531	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr5	32657192	32657208	protein_coding	Plb1	exon	ENSMUSG00000029134	ProperStrand	50	1	-6.2703
chr7	150252584	150253058	protein_coding	Cd81	exon	ENSMUSG00000037706	ProperStrand	88	chr5	115940322	115940406	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	13	-20.2612
chr10	110918519	110918558	protein_coding	Nap1l1	intron	ENSMUSG00000058799	ProperStrand	185	chr10	110918560	110918634	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	3	-4.4917
chr15	88560376	88560407	protein_coding	Brd1	exon	ENSMUSG00000022387	ProperStrand	70	chr1	173433177	173433255	protein_coding	B930036N10Rik	utr3	ENSMUSG00000091993	ProperStrand	150	1	-11.1643
chr15	101914600	101926277	protein_coding	Eif4b	utr3	ENSMUSG00000058655	ProperStrand	484	chr10	23505151	23505269	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	10	-1.3754
chr11	100302888	100302907	protein_coding	Nt5c3l	intron	ENSMUSG00000017176	NonProperStrand	1	chr2	26494708	26494759	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-inf
chr10	110837603	110837693	SINE	B2_Mm1t	B2	chr10B2_Mm1t110837512	ProperStrand	1	chr18	45042857	45042947	protein_coding	Ythdc2	intron	ENSMUSG00000034653	NonProperStrand	2	1	-inf
chr2	121921475	121923044	protein_coding	Spg11	exon	ENSMUSG00000033396	ProperStrand	32	chr9	120039591	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-4.4995
chr7	28390553	28423185	protein_coding	Akt2	utr3	ENSMUSG00000004056	ProperStrand	100	chr16	23110884	23111779	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	13	-9.7012
chr7	86805831	86810581	protein_coding	5730590G19Rik	exon	ENSMUSG00000046591	ProperStrand	45	chr15	34370592	34370672	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-4.0871
chr5	110571275	110571375	protein_coding	Chfr	intron	ENSMUSG00000014668	ProperStrand	6	chr2	158210910	158210961	protein_coding	Snhg11	utr3	ENSMUSG00000044349	ProperStrand	8	1	-18.4474
chr6	72178971	72178988	protein_coding	Atoh8	intron	ENSMUSG00000037621	NonProperStrand	61	chr16	23110454	23110489	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.4335
chr8	24367267	24367497	protein_coding	Golga7	utr5	ENSMUSG00000015341	ProperStrand	36	chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	1	-10.0938
chr9	47618170	47621889	protein_coding	Cadm1	exon	ENSMUSG00000032076	ProperStrand	77	chr5	130300460	130300551	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	6	-12.7930
chr11	68067261	68067277	protein_coding	Ntn1	intron	ENSMUSG00000020902	NonProperStrand	194	chr11	55296276	55296332	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-3.9188
chr4	43505656	43505683	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr15	81230206	81230280	protein_coding	St13	utr5	ENSMUSG00000022403	ProperStrand	59	1	-3.1005
chr18	10052131	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr7	52381972	52382013	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-2.4683
chr1	9535642	9535704	protein_coding	Rrs1	exon	ENSMUSG00000061024	ProperStrand	18	chr4	131908303	131908393	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.4481
chr19	47622675	47622765	DNA	MER47B	MER2_type	chr19MER47B47622651	NonProperStrand	1	chr19	47622887	47622977	LTR	ORR1B2	MaLR	chr19ORR1B247622885	ProperStrand	1	1	-inf
chr17	35293766	35293818	protein_coding	Prrc2a	exon	ENSMUSG00000024393	ProperStrand	315	chr7	97323465	97323483	protein_coding	Picalm	intron	ENSMUSG00000039361	NonProperStrand	5	1	-15.1489
chr9	78023109	78023157	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr12	92811956	92812014	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	1	-1.6030
chr2	129998643	129998710	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr11	23187416	23189777	protein_coding	Xpo1	exon	ENSMUSG00000020290	ProperStrand	123	1	-6.6824
chr10	61732564	61767178	protein_coding	Hk1	exon	ENSMUSG00000037012	ProperStrand	84	chr16	23110907	23110997	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	7	-3.8091
chr9	110539151	110544366	protein_coding	Nbeal2	exon	ENSMUSG00000056724	ProperStrand	161	chr17	24857716	24857798	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	7	-9.0876
chr1	13579830	13579893	protein_coding	Tram1	utr5	ENSMUSG00000025935	ProperStrand	28	chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	1	-10.0408
chr11	101645784	101645808	protein_coding-noncoding	Etv4	utr3	ENSMUSG00000017724	NonProperStrand	9	chr19	8963048	8963173	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.8692
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	3	-12.0328
chr3	99003132	99003159	protein_coding	Wars2	intron	ENSMUSG00000004233	NonProperStrand	48	chr16	23110839	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-2.0114
chr12	104317206	104317223	protein_coding	Unc79	exon	ENSMUSG00000021198	ProperStrand	99	chr4	41150095	41150159	snoRNA	ENSMUSG00000089265_SNORD121A	.	ENSMUSG00000089265	ProperStrand	370	2	-13.7661
chr6	70794801	70794819	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chr3	123210883	123210983	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-0.7546
chr10	57943057	57943143	protein_coding	Ranbp2	exon	ENSMUSG00000003226	ProperStrand	52	chr3	88715214	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-7.5195
chr9	62992379	62992395	protein_coding	Skor1	exon	ENSMUSG00000022245	NonProperStrand	70	chr4	131865855	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.5345
chr2	97822532	97822551	LINE	L1Md_F2	L1	chr2L1Md_F297822359	NonProperStrand	1	chr2	32087997	32088024	protein_coding	Prrc2b	utr3	ENSMUSG00000039262	ProperStrand	344	1	-inf
chr17	4082402	4082502	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr9	61785290	61792014	protein_coding	Kif23	exon	ENSMUSG00000032254	ProperStrand	41	1	-10.7328
chr2	121906052	121907598	protein_coding	Spg11	exon	ENSMUSG00000033396	ProperStrand	32	chr8	32260346	32260426	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-5.8566
chr5	73797415	73797433	protein_coding	Cwh43	utr5	ENSMUSG00000029154	NonProperStrand	3	chr14	27920216	27920233	protein_coding	Il17rd	utr3	ENSMUSG00000040717	ProperStrand	24	1	-inf
chr17	68211049	68211065	protein_coding	Arhgap28	intron	ENSMUSG00000024043	NonProperStrand	7	chr11	62416600	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-9.5351
chr13	107783261	107783303	protein_coding	Kif2a	exon	ENSMUSG00000021693	ProperStrand	32	chr16	23110914	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.9664
chr11	55296231	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	chr2	158203954	158204034	snoRNA	ENSMUSG00000065840_SNORA71	.	ENSMUSG00000065840	ProperStrand	107	15	-inf
chr6	124761093	124764170	protein_coding	Tpi1	utr3	ENSMUSG00000023456	ProperStrand	94	chr16	23111758	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-2.3816
chrX	132705285	132705365	protein_coding	Tceal8	exon	ENSMUSG00000051579	ProperStrand	3	chr2	26493413	26493503	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-9.9740
chr10	114835080	114837815	protein_coding	Zfc3h1	utr5	ENSMUSG00000034163	ProperStrand	58	chr4	149989877	149990066	protein_coding	Rere	exon	ENSMUSG00000039852	ProperStrand	76	1	-12.9079
chr11	79748890	79748907	protein_coding	Utp6	utr3	ENSMUSG00000035575	ProperStrand	28	chr15	34370545	34370651	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	5	-20.2298
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr5	74489539	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	6	-2.4251
chr7	117166776	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	chr8	113362493	113362512	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	3	-3.9344
chr7	86505799	86505821	protein_coding	Abhd2	utr3	ENSMUSG00000039202	ProperStrand	47	chr14	52829459	52829519	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-8.6919
chr16	32278002	32278100	protein_coding	Rnf168	utr5	ENSMUSG00000014074	ProperStrand	7	chr7	52378401	52378457	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	1	-12.9263
chr13	49779669	49779759	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	chr16	16854373	16854402	tRNA	tRNA76-LysCTT	.	1065405	ProperStrand	1	1	-inf
chr4	85016349	85016365	protein_coding	Sh3gl2	intron	ENSMUSG00000028488	NonProperStrand	313	chr2	145076805	145209255	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-4.4904
chr2	26493462	26493520	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr2	138188029	138188045	protein_coding	Btbd3	intron	ENSMUSG00000062098	NonProperStrand	121	1	-4.8274
chrX	7478087	7478104	protein_coding	Timm17b	exon	ENSMUSG00000031158	ProperStrand	36	chr11	106362640	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-8.4280
chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	chr1	162966813	162966867	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-2.4249
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr4	155366536	155366553	protein_coding	B3galt6	exon	ENSMUSG00000050796	ProperStrand	40	1	-9.6061
chr11	45723144	45723160	protein_coding	Clint1	utr3	ENSMUSG00000006169	NonProperStrand	273	chr15	79908984	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-2.6498
chr19	55998429	55998445	protein_coding	Tcf7l2	utr3	ENSMUSG00000024985	ProperStrand	103	chr2	37298893	37298958	protein_coding	Rabgap1	utr5	ENSMUSG00000035437	ProperStrand	20	1	-14.4523
chr3	121978708	121978732	protein_coding	Dnttip2	exon	ENSMUSG00000039756	ProperStrand	4	chr1	162968226	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	2	-19.6904
chr11	68840033	68840793	protein_coding	1500010J02Rik	exon	ENSMUSG00000020898	NonProperStrand	5	chr15	101919408	101920316	protein_coding	Eif4b	exon	ENSMUSG00000058655	NonProperStrand	6	3	-19.1450
chrX	150765543	150765559	LINE	L1_Mus2	L1	chrXL1_Mus2150765117	NonProperStrand	49	chr7	4691730	4691754	protein_coding	Suv420h2	utr5	ENSMUSG00000059851	NonProperStrand	70	1	-13.4152
chr10	127995897	128002596	protein_coding	Pa2g4	utr3	ENSMUSG00000025364	ProperStrand	72	chr11	69481335	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-4.9912
chr10	92710654	92710671	protein_coding	Elk3	utr3	ENSMUSG00000008398	ProperStrand	9	chr8	13416897	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-10.3167
chr7	112782969	112782985	protein_coding	Arfip2	utr3	ENSMUSG00000030881	ProperStrand	191	chr11	97697701	97697773	protein_coding	Lasp1	utr3	ENSMUSG00000038366	ProperStrand	65	1	-10.8294
chr17	75690723	75690739	protein_coding	Ltbp1	exon	ENSMUSG00000001870	ProperStrand	136	chr9	45707927	45707989	protein_coding	Rnf214	exon	ENSMUSG00000042790	ProperStrand	24	1	-13.5247
chr3	151780572	151780592	protein_coding	Gipc2	intron	ENSMUSG00000039131	NonProperStrand	4	chr15	34370545	34370625	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	3	-inf
chr5	65952377	65952395	protein_coding	Ube2k	intron	ENSMUSG00000029203	ProperStrand	289	chr8	107815559	107815625	protein_coding	Exoc3l	intron	ENSMUSG00000043251	NonProperStrand	5	3	-19.1786
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr7	117189955	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-0.7038
chr18	10052133	10052153	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr5	149859436	149859453	protein_coding	Hmgb1	utr3	ENSMUSG00000066551	NonProperStrand	16	1	-11.4832
chr3	100847400	100860364	protein_coding	Ptgfrn	exon	ENSMUSG00000027864	ProperStrand	67	chr16	23110832	23110922	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-2.8648
chr14	31382257	31383173	protein_coding	Tkt	exon	ENSMUSG00000021957	ProperStrand	160	chr9	120038621	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	10	-19.9247
chr13	90238620	90238720	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	chr17	35087895	35087947	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	8	-12.7645
chr8	64001799	64003942	protein_coding	Palld	exon	ENSMUSG00000058056	ProperStrand	39	chr1	162967513	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.2823
chr9	21620424	21620841	protein_coding	Dock6	exon	ENSMUSG00000032198	ProperStrand	155	chr11	97643004	97643084	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-2.0380
chr2	11602046	11603567	protein_coding	Il2ra	exon	ENSMUSG00000026770	ProperStrand	17	chr8	13159389	13159405	protein_coding	Lamp1	exon	ENSMUSG00000031447	ProperStrand	92	1	-15.0321
chr8	91556380	91556438	protein_coding	Sall1	exon	ENSMUSG00000031665	ProperStrand	96	chr7	109344506	109344522	protein_coding	Nup98	intron	ENSMUSG00000063550	ProperStrand	100	1	-11.3426
chr1	120734450	120734531	protein_coding	Gli2	exon	ENSMUSG00000048402	ProperStrand	148	chr1	162966854	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	3	-10.7470
chr16	33185488	33185506	protein_coding	Osbpl11	utr5	ENSMUSG00000022807	ProperStrand	31	chr4	131908373	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.4690
chr1	64078328	64078366	protein_coding	Klf7	utr3	ENSMUSG00000025959	ProperStrand	9	chr10	23505152	23505201	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.5477
chr15	35359958	35360038	protein_coding	Vps13b	utr5	ENSMUSG00000037646	ProperStrand	56	chrX	34622906	34622989	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-3.2962
chr3	123210911	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	chr12	81618868	81618894	snoRNA	ENSMUSG00000093141_AC163282.1	.	ENSMUSG00000093141	ProperStrand	39	2	-4.8904
chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	chr12	17552948	17553029	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-1.3729
chr2	103588240	103588355	protein_coding	Nat10	exon	ENSMUSG00000027185	NonProperStrand	64	chr9	120039533	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.2015
chr4	53015201	53015217	SINE	B1F1	Alu	chr4B1F153015138	ProperStrand	102	chr13	6620208	6620231	protein_coding	Pfkp	exon	ENSMUSG00000021196	ProperStrand	197	1	-9.8633
chr11	77887451	77887551	protein_coding	Eral1	utr3	ENSMUSG00000020832	ProperStrand	8	chr15	5068442	5068480	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-10.1730
chr14	71165860	71165877	protein_coding-noncoding	Dok2	utr5	ENSMUSG00000022102	ProperStrand	5	chr13	23647190	23647310	protein_coding	Hist1h1d	exon	ENSMUSG00000052565	ProperStrand	78	1	-17.9570
chr15	83314512	83314530	protein_coding	Ttll1	utr3	ENSMUSG00000022442	ProperStrand	11	chr16	23111770	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.0138
chr11	70339840	70339895	protein_coding	Psmb6	exon	ENSMUSG00000018286	ProperStrand	11	chr2	105069014	105069033	protein_coding	0610012H03Rik	intron	ENSMUSG00000055312	NonProperStrand	2	1	-inf
chr11	95541109	95541134	protein_coding	Phb	exon	ENSMUSG00000038845	ProperStrand	126	chr19	8799828	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-3.5445
chr11	102294589	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr9	15119289	15119426	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	4	-5.4317
chr4	131865381	131865511	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	chr6	124665347	124665483	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	6	-1.4160
chr4	100831481	100831651	protein_coding	Jak1	exon	ENSMUSG00000028530	ProperStrand	30	chr9	15119721	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	4	-12.8596
chr8	38049667	38049683	LTR	MLT1A0	MaLR	chr8MLT1A038049422	NonProperStrand	91	chr11	62416578	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-4.3656
chr7	53313886	53316250	protein_coding	Nomo1	exon	ENSMUSG00000030835	ProperStrand	85	chr1	91001669	91001725	protein_coding	Sh3bp4	intron	ENSMUSG00000036206	ProperStrand	20	2	-19.3765
chr7	35996775	35996830	protein_coding	Lrp3	intron	ENSMUSG00000001802	ProperStrand	17	chr4	131908809	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-8.4805
chr2	90235293	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr15	12303154	12303244	protein_coding	Pdzd2	exon	ENSMUSG00000022197	ProperStrand	21	1	-6.5250
chr6	137472077	137472117	protein_coding	Eps8	intron	ENSMUSG00000015766	ProperStrand	14	chr11	102152255	102152369	protein_coding	Atxn7l3	utr3	ENSMUSG00000059995	ProperStrand	24	1	-18.1247
chr8	3642156	3642172	protein_coding	Stxbp2	intron	ENSMUSG00000004626	NonProperStrand	73	chr8	119984875	119984892	protein_coding	4933407C03Rik	utr3	ENSMUSG00000034390	ProperStrand	48	1	-13.3710
chr7	31228118	31228185	protein_coding	Aplp1	exon	ENSMUSG00000006651	ProperStrand	29	chr7	31237896	31238117	protein_coding	Kirrel2	exon	ENSMUSG00000036915	ProperStrand	17	9	-inf
chr11	96714750	96714766	protein_coding	Copz2	exon	ENSMUSG00000018672	ProperStrand	11	chr9	15119631	15119693	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.8656
chr7	133939314	133939551	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	chr10	110918647	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	9	-6.0692
chr12	8941789	8942820	protein_coding	Laptm4a	exon	ENSMUSG00000020585	ProperStrand	15	chr4	57268565	57268583	protein_coding	Ptpn3	intron	ENSMUSG00000038764	ProperStrand	48	1	-16.5487
chr10	75855150	75855168	protein_coding	Pcnt	exon	ENSMUSG00000001151	ProperStrand	127	chrX	16262392	16262451	protein_coding	Maoa	exon	ENSMUSG00000025037	ProperStrand	17	2	-inf
chr7	38354919	38354935	protein_coding	Zfp536	exon	ENSMUSG00000043456	NonProperStrand	236	chr10	39978344	39978362	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-2.8919
chr5	74489518	74489594	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr6	48410411	48410429	protein_coding	Sspo	exon	ENSMUSG00000029797	NonProperStrand	94	1	-4.7509
chr17	53623235	53639768	protein_coding	Rab5a	exon	ENSMUSG00000017831	ProperStrand	44	chr16	23110837	23111005	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.3090
chr16	23110828	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	chr3	90279769	90279859	tRNA	tRNA792-MetCAT	.	248121	ProperStrand	42	2	-1.3954
chr8	126457354	126459988	protein_coding	Nup133	exon	ENSMUSG00000039509	ProperStrand	59	chr16	23110940	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-1.4985
chr8	72632126	72632142	protein_coding	Ncan	exon	ENSMUSG00000002341	NonProperStrand	6	chr11	119532659	119586329	protein_coding	Rptor	exon	ENSMUSG00000025583	ProperStrand	76	1	-17.4572
chr12	60803727	60803746	LINE	Lx9	L1	chr12Lx960803375	NonProperStrand	1	chr9	15119631	15119672	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-inf
chr1	155308256	155309765	protein_coding	Dhx9	exon	ENSMUSG00000042699	ProperStrand	98	chr1	39605591	39605632	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-6.3714
chr11	69548340	69548360	protein_coding	Polr2a	exon	ENSMUSG00000005198	ProperStrand	200	chrX	101017112	101017128	protein_coding	Slc16a2	exon	ENSMUSG00000033965	ProperStrand	35	1	-11.9868
chr11	12153364	12154154	protein_coding	Cobl	exon	ENSMUSG00000020173	ProperStrand	133	chr9	15118323	15118377	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	7	-15.2886
chrX	71142795	71142901	protein_coding	Arhgap4	exon	ENSMUSG00000031389	NonProperStrand	18	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-11.0322
chr5	112736967	112737012	protein_coding	Tpst2	exon	ENSMUSG00000029344	ProperStrand	34	chr4	117899138	117903361	protein_coding	Ptprf	exon	ENSMUSG00000033295	ProperStrand	337	1	-11.0016
chr10	12642432	12642449	lincRNA	B230208H11Rik	exon	ENSMUSG00000085233	ProperStrand	21	chr10	95499367	95499383	protein_coding	Eea1	utr3	ENSMUSG00000036499	ProperStrand	82	2	-19.8014
chr2	73275661	73275683	protein_coding	Wipf1	exon	ENSMUSG00000075284	ProperStrand	6	chr11	55296210	55296272	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-10.9110
chr18	34787605	34787775	protein_coding	Kif20a	exon	ENSMUSG00000003779	ProperStrand	50	chr5	108336363	108336443	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-5.2347
chr17	41630153	41630170	LTR	RMER15	ERVL	chr17RMER1541630131	NonProperStrand	1	chr19	7038906	7038956	protein_coding	Plcb3	exon	ENSMUSG00000024960	ProperStrand	111	1	-inf
chr12	18521652	18538488	protein_coding	5730507C01Rik	exon	ENSMUSG00000073197	ProperStrand	2	chr4	131865856	131865936	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-8.7800
chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-6.5357
chr9	44321161	44321178	protein_coding	Cxcr5	utr3	ENSMUSG00000047880	ProperStrand	2	chr16	23110834	23110873	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr12	3968611	3968627	protein_coding	Efr3b	exon	ENSMUSG00000020658	ProperStrand	142	chr17	68140895	68140939	protein_coding	Lama1	exon	ENSMUSG00000032796	ProperStrand	168	1	-9.5195
chr10	127483290	127484716	protein_coding	Naca	exon	ENSMUSG00000061315	ProperStrand	50	chr19	8799845	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-5.3011
chr7	29599067	29599263	protein_coding	Hnrnpl	exon	ENSMUSG00000015165	ProperStrand	150	chr7	137538244	137562045	protein_coding	Ate1	exon	ENSMUSG00000030850	ProperStrand	14	1	-14.4489
chr17	48057910	48057961	protein_coding	Foxp4	intron	ENSMUSG00000023991	ProperStrand	27	chr8	125418802	125418818	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	1	-11.2298
chr2	90235293	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	21606177	21606193	protein_coding	Dock6	exon	ENSMUSG00000032198	NonProperStrand	30	1	-5.8128
chr19	45661164	45661233	protein_coding	Fbxw4	intron	ENSMUSG00000040913	ProperStrand	18	chr11	99885311	99885327	protein_coding	Krt33b	exon	ENSMUSG00000057723	NonProperStrand	352	1	-12.2117
chr13	9139029	9139069	protein_coding	Larp4b	intron	ENSMUSG00000033499	ProperStrand	53	chr4	131908236	131908291	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.6010
chr16	87419194	87419286	snoRNA	ENSMUSG00000065647_SNORA2	.	ENSMUSG00000065647	ProperStrand	123	chr8	32260371	32260422	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	2	-5.6211
chr17	24837876	24837892	protein_coding	Tbl3	exon	ENSMUSG00000040688	ProperStrand	42	chr8	73419548	73419818	protein_coding	Rpl18a	exon	ENSMUSG00000045128	ProperStrand	394	1	-10.2620
chr5	116066704	116066737	protein_coding	Gcn1l1	exon	ENSMUSG00000041638	ProperStrand	408	chr2	158182201	158182278	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-1.6055
chr10	127521200	127521271	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	chr17	24857715	24857852	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	9	-3.3271
chr9	21814672	21814984	protein_coding	Prkcsh	exon	ENSMUSG00000003402	ProperStrand	58	chr11	107036917	107036987	protein_coding	Nol11	exon	ENSMUSG00000018433	ProperStrand	12	1	-16.6812
chr17	85465044	85465060	protein_coding	Prepl	exon	ENSMUSG00000024127	ProperStrand	106	chr8	86535302	86535320	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	1	-10.2916
chr16	85025737	85030571	protein_coding	App	exon	ENSMUSG00000022892	ProperStrand	11	chr11	97642952	97642983	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-5.6855
chr14	70970013	70970103	protein_coding	Hr	intron	ENSMUSG00000022096	NonProperStrand	1	chr8	113406975	113407184	protein_coding	Fuk	utr3	ENSMUSG00000033703	ProperStrand	18	1	-inf
chr19	38863985	38864033	protein_coding	Noc3l	utr3	ENSMUSG00000024999	ProperStrand	11	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	1	-10.4756
chr14	76248051	76248076	protein_coding	Tpt1	utr3	ENSMUSG00000060126	ProperStrand	236	chr10	23505559	23505621	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	4	-15.1223
chr5	93371925	93371941	protein_coding	Shroom3	exon	ENSMUSG00000029381	ProperStrand	52	chr9	15118256	15118321	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.7315
chr8	107165492	107165508	protein_coding	Fam96b	exon	ENSMUSG00000031879	ProperStrand	21	chr12	29316605	29316634	protein_coding	Rps7	exon	ENSMUSG00000061477	ProperStrand	129	1	-13.9052
chr6	136766550	136769078	protein_coding	Wbp11	exon	ENSMUSG00000030216	ProperStrand	87	chr5	130295452	130295542	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-4.5318
chr13	96916447	96916527	LTR	ETnERV2-int	ERVK	chr13ETnERV2-int96916219	NonProperStrand	1	chr13	96916739	96916829	LTR	ETnERV2-int	ERVK	chr13ETnERV2-int96916747	NonProperStrand	1	1	-inf
chr2	26493402	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr2	121949510	121949526	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	1	-3.3245
chr7	96107833	96107849	LTR	RLTR23	ERV1	chr7RLTR2396107462	ProperStrand	11	chr15	98364575	98364633	protein_coding	2310037I24Rik	utr5	ENSMUSG00000022992	ProperStrand	91	1	-15.9407
chr14	64081493	64081513	protein_coding	Fam167a	utr3	ENSMUSG00000035095	ProperStrand	80	chr10	23506278	23506338	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-6.3777
chr5	74489285	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr2	22444487	22444511	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	2	-1.7802
chr4	131826032	131826122	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	chr8	98269992	98270072	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-1.8346
chr8	122129036	122129052	protein_coding	Taf1c	utr5	ENSMUSG00000031832	ProperStrand	26	chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	1	-11.1786
chr2	22444716	22444750	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	chr2	158185530	158185642	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-1.4714
chr17	66173715	66173799	protein_coding	Ppp4r1	exon	ENSMUSG00000061950	ProperStrand	46	chr19	8798743	8798803	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-5.3169
chrX	71589885	71589907	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr9	120038553	120038672	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	3	-2.3936
chr15	10521312	10521355	protein_coding	Rai14	intron	ENSMUSG00000022246	ProperStrand	180	chr1	162966813	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-4.1344
chr4	57455800	57455817	protein_coding	Palm2	intron	ENSMUSG00000090053	ProperStrand	17	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-6.0488
chr5	114815599	114815653	protein_coding	Kctd10	utr3	ENSMUSG00000001098	ProperStrand	3	chr1	162965555	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-9.4650
chr12	110035235	110035274	protein_coding	Yy1	intron	ENSMUSG00000021264	ProperStrand	31	chr4	131908235	131908355	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	7	-17.5226
chr5	54389949	54389965	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	chr15	78127411	78127427	protein_coding	Csf2rb2	exon	ENSMUSG00000071714	NonProperStrand	14	1	-13.7478
chr17	35283004	35283202	protein_coding	Bag6	exon	ENSMUSG00000024392	ProperStrand	181	chr16	87485911	87485947	protein_coding	Cct8	exon	ENSMUSG00000025613	ProperStrand	65	1	-10.9374
chr9	42706135	42706152	protein_coding	Grik4	intron	ENSMUSG00000032017	ProperStrand	32	chr14	76247734	76247765	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-5.3863
chr7	52382338	52382369	protein_coding-noncoding	Rpl13a	utr3	ENSMUSG00000074129	ProperStrand	106	chr17	35088957	35089017	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-4.7616
chr6	4706080	4708807	protein_coding	Peg10	utr3	ENSMUSG00000092035	ProperStrand	102	chr16	23110829	23111001	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	10	-5.7454
chr7	151533765	151533856	protein_coding	Shank2	intron	ENSMUSG00000037541	NonProperStrand	17	chr17	47297397	47297477	protein_coding	Trerf1	intron	ENSMUSG00000064043	NonProperStrand	4	1	-inf
chr11	54413669	54413772	protein_coding	Rapgef6	intron	ENSMUSG00000037533	ProperStrand	27	chr4	131908767	131908798	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-9.1166
chr4	128900278	128900384	protein_coding	C77080	exon	ENSMUSG00000050390	ProperStrand	48	chr1	162966001	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-4.0203
chr4	56821262	56821312	protein_coding	BC026590	utr3	ENSMUSG00000038827	ProperStrand	3	chr16	23111730	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-7.8619
chr7	20201777	20203181	protein_coding	Relb	exon	ENSMUSG00000002983	ProperStrand	17	chr6	115757991	115758081	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-7.9927
chr18	6454377	6455188	protein_coding	Epc1	exon	ENSMUSG00000024240	NonProperStrand	4	chr18	33954836	33954937	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-9.0265
chr11	57856054	57856274	protein_coding	Larp1	exon	ENSMUSG00000037331	ProperStrand	201	chr18	73693161	73693184	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-3.2373
chrX	7182489	7182506	protein_coding	Ccdc22	utr5	ENSMUSG00000031143	NonProperStrand	51	chr2	26494798	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.4022
chr9	96977979	96978071	protein_coding	Slc25a36	utr3	ENSMUSG00000032449	ProperStrand	159	chr8	73419657	73419715	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-1.5170
chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	chr7	150717306	150717353	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-1.5128
chr5	147647246	147647473	protein_coding	Rpl21	exon	ENSMUSG00000041453	ProperStrand	112	chr5	108336362	108336412	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-3.6985
chr9	108730277	108751213	protein_coding	Celsr3	exon	ENSMUSG00000023473	ProperStrand	31	chr4	131908689	131908808	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-8.4322
chr18	52927926	52927944	protein_coding	Sncaip	intron	ENSMUSG00000024534	NonProperStrand	16	chr1	89673611	89673711	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-5.8062
chr12	112779247	112779285	protein_coding	Eif5	intron	ENSMUSG00000021282	ProperStrand	125	chr9	120039548	120039648	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-3.6905
chr1	115800558	115800598	lincRNA	9330185C12Rik	intron	ENSMUSG00000086520	ProperStrand	45	chr6	39349810	39349913	protein_coding	Mkrn1	exon	ENSMUSG00000029922	ProperStrand	177	1	-11.7235
chr7	16524109	16524160	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	chr5	130300439	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	6	-3.6647
chr11	6428035	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr2	91436258	91436337	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	43	-inf
mmu-miR-3963	3	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr4	43505656	43505801	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	13	-1.4543
chr14	61381778	61381795	protein_coding	Spata13	utr3	ENSMUSG00000021990	ProperStrand	28	chr4	131908809	131908896	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.4067
chr11	52190169	52197355	protein_coding	Vdac1	exon	ENSMUSG00000020402	ProperStrand	107	chr5	74489603	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-2.7318
chr6	89021412	89021428	SINE	B3	B2	chr6B389021311	NonProperStrand	1	chr13	100830380	100830439	protein_coding	Bdp1	exon	ENSMUSG00000049658	ProperStrand	159	1	-inf
chr13	13578931	13578948	protein_coding	Nid1	exon	ENSMUSG00000005397	ProperStrand	112	chr8	32260336	32260425	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-3.4577
chr19	30211645	30211700	protein_coding	Gldc	exon	ENSMUSG00000024827	ProperStrand	175	chr9	15119722	15119969	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-0.9996
chr14	26705574	26705650	protein_coding	Anxa11	utr3	ENSMUSG00000021866	ProperStrand	30	chr17	35088957	35089003	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-7.2453
chr17	69737986	69738002	protein_coding	Zfp161	utr3	ENSMUSG00000049672	NonProperStrand	45	chr4	131865855	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	8	-19.3337
chr9	119833910	119833980	protein_coding	Wdr48	utr3	ENSMUSG00000032512	ProperStrand	16	chr18	73693109	73693137	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-8.1701
chr19	5225893	5225979	protein_coding	Pacs1	intron	ENSMUSG00000024855	ProperStrand	24	chr16	23110988	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.3518
chr2	90235315	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr14	64829132	64829149	protein_coding	Msra	intron	ENSMUSG00000054733	NonProperStrand	84	1	-3.8272
chrX	159325840	159325857	protein_coding	Syap1	intron	ENSMUSG00000031357	NonProperStrand	4	chr19	8963027	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-7.6308
chr14	34754277	34754294	protein_coding	Gdf2	utr5	ENSMUSG00000072625	NonProperStrand	2	chr16	23111386	23111433	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-8.0851
chr16	20302316	20302332	protein_coding	Parl	exon	ENSMUSG00000033918	ProperStrand	19	chr10	39978308	39978371	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-7.7531
chr2	164311966	164311983	protein_coding	Dbndd2	utr5	ENSMUSG00000017734	ProperStrand	53	chr4	140121137	140121153	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	1	-11.9205
chr9	109995629	109999608	protein_coding	Dhx30	exon	ENSMUSG00000032480	ProperStrand	29	chr1	70083046	70083064	protein_coding	Spag16	intron	ENSMUSG00000053153	ProperStrand	16	1	-17.5410
chr4	128719592	128719682	SINE	B3	B2	chr4B3128719575	ProperStrand	1	chr4	128719990	128720070	SINE	MIRc	MIR	chr4MIRc128719989	ProperStrand	1	1	-inf
chr15	78723062	78723650	protein_coding	Gga1	exon	ENSMUSG00000033128	ProperStrand	15	chr16	23110984	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-3.8284
chr10	67560356	67560385	protein_coding	Arid5b	exon	ENSMUSG00000019947	ProperStrand	43	chr12	103727641	103727702	protein_coding	Golga5	exon	ENSMUSG00000021192	ProperStrand	9	2	-inf
chr4	131908380	131908454	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr11	78313939	78313956	protein_coding	Vtn	exon	ENSMUSG00000017344	ProperStrand	188	1	-5.0178
chr1	9713560	9713606	protein_coding	Vcpip1	utr3	ENSMUSG00000045210	ProperStrand	34	chr8	113366292	113366354	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	1	-10.3243
chr4	131908773	131908795	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	chr3	85904466	85904568	snoRNA	ENSMUSG00000065847_SNORA32	.	ENSMUSG00000065847	ProperStrand	40	1	-1.8200
chr4	43505717	43505797	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr8	34951521	34951611	protein_coding	Rbpms	intron	ENSMUSG00000031586	ProperStrand	58	1	-3.1313
chr4	130485386	130485434	protein_coding	Laptm5	exon	ENSMUSG00000028581	ProperStrand	34	chr15	79913298	79913346	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.6681
chr19	4115446	4115469	protein_coding	Aip	exon	ENSMUSG00000024847	ProperStrand	5	chr3	123210854	123210923	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-6.8746
chr9	15119297	15119397	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	chr11	62418015	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	18	-11.7374
chr2	179322377	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr10	23505149	23505262	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-1.0052
chrX	7752870	7752886	protein_coding	Tbc1d25	exon	ENSMUSG00000039201	ProperStrand	126	chr16	38347184	38347229	protein_coding	Cox17	utr5	ENSMUSG00000046516	ProperStrand	5	1	-16.9539
chr1	162968213	162968238	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	chr5	92485086	92485218	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	7	-17.1009
chr2	179802104	179802194	protein_coding	Ss18l1	utr3	ENSMUSG00000039086	ProperStrand	18	chr7	116663653	116663733	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.7447
chr17	56861529	56861564	protein_coding	Ndufa11	utr3	ENSMUSG00000002379	ProperStrand	17	chr4	131908236	131908299	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-6.1110
chr12	3968611	3968627	protein_coding	Efr3b	exon	ENSMUSG00000020658	ProperStrand	142	chr2	37228016	37228041	protein_coding	Rc3h2	utr3	ENSMUSG00000075376	ProperStrand	35	1	-12.6742
chr8	13175012	13175072	protein_coding	Lamp1	utr3	ENSMUSG00000031447	ProperStrand	92	chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	1	-7.9744
chr7	118222843	118222880	protein_coding	Eif4g2	exon	ENSMUSG00000005610	ProperStrand	134	chr12	112779230	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-3.2701
chr12	70284140	70285024	protein_coding	Rpl36al	utr5	ENSMUSG00000049751	ProperStrand	10	chr1	157913710	157913738	protein_coding	Tor1aip2	utr3	ENSMUSG00000050565	ProperStrand	31	1	-17.8875
chr11	4978559	4979519	protein_coding	Ewsr1	exon	ENSMUSG00000009079	ProperStrand	248	chr11	62416981	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-3.3384
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr5	118376503	118376519	protein_coding	Nos1	exon	ENSMUSG00000029361	NonProperStrand	237	3	-8.2352
chr5	74031045	74031114	protein_coding	Sgcb	exon	ENSMUSG00000029156	ProperStrand	14	chr12	106269345	106269445	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	2	-11.3743
chr17	21091637	21092774	protein_coding	Ppp2r1a	exon	ENSMUSG00000007564	ProperStrand	57	chr19	42225881	42225897	protein_coding	Marveld1	utr3	ENSMUSG00000044345	NonProperStrand	112	1	-12.1633
chr18	34880002	34880019	protein_coding	Gfra3	utr5	ENSMUSG00000024366	ProperStrand	41	chr19	8963116	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.9336
chr5	145532231	145532321	protein_coding	Trrap	intron	ENSMUSG00000045482	ProperStrand	399	chr7	134671466	134671517	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-4.1731
chr5	115722321	115722342	protein_coding	Rnf10	exon	ENSMUSG00000041740	ProperStrand	95	chr4	131866176	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	4	-9.8989
chrX	7387435	7387525	protein_coding	Gripap1	exon	ENSMUSG00000031153	ProperStrand	7	chr10	23505203	23505283	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-12.5835
chr3	156224612	156224628	lincRNA	4930570G19Rik	exon	ENSMUSG00000085084	ProperStrand	326	chr5	121655032	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-1.9757
chr16	23111792	23111835	protein_coding	Eif4a2	intron	ENSMUSG00000022884	ProperStrand	356	chr4	43049175	43049275	protein_coding	B230312A22Rik	exon	ENSMUSG00000036002	ProperStrand	14	11	-inf
chr8	46102869	46102936	protein_coding	Fat1	exon	ENSMUSG00000070047	ProperStrand	306	chr9	15118533	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	1	-6.1062
chr16	30065454	30065495	protein_coding	Hes1	utr5	ENSMUSG00000022528	ProperStrand	6	chr7	116663637	116663727	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-7.0045
chr15	7143333	7143413	protein_coding	Lifr	utr3	ENSMUSG00000054263	ProperStrand	64	chr19	8800391	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-3.4114
chr11	12137154	12137180	protein_coding	Cobl	utr3	ENSMUSG00000020173	ProperStrand	133	chr2	124902094	124902111	protein_coding	Slc24a5	intron	ENSMUSG00000035183	ProperStrand	2	1	-20.0354
chr19	5801043	5801143	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr11	99885311	99885327	protein_coding	Krt33b	exon	ENSMUSG00000057723	NonProperStrand	352	1	-4.0984
chr9	26949313	26949332	protein_coding	Jam3	intron	ENSMUSG00000031990	NonProperStrand	8	chr9	43612119	43612252	protein_coding	Pvrl1	utr3	ENSMUSG00000032012	ProperStrand	45	1	-17.8233
chr10	82359499	82359589	protein_coding	Txnrd1	utr3	ENSMUSG00000020250	ProperStrand	47	chr11	97642954	97643034	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.8973
chr13	97436498	97436545	protein_coding	Hmgcr	exon	ENSMUSG00000021670	ProperStrand	56	chr7	67125763	67125819	snoRNA	ENSMUSG00000089375_Snord107	.	ENSMUSG00000089375	ProperStrand	451	1	-9.4130
chr4	43505840	43505931	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr13	25201948	25201964	protein_coding	Dcdc2a	exon	ENSMUSG00000035910	NonProperStrand	9	1	-6.7740
chr9	106093346	106093402	protein_coding	Wdr82	utr3	ENSMUSG00000020257	ProperStrand	34	chr17	24857763	24857779	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.2959
chr2	172825857	172825875	protein_coding	Rae1	utr5	ENSMUSG00000027509	NonProperStrand	44	chr5	148113281	148113297	protein_coding	Cdx2	utr3	ENSMUSG00000029646	ProperStrand	276	1	-10.8796
chr2	4974190	4974207	protein_coding	Optn	exon	ENSMUSG00000026672	ProperStrand	451	chr11	86509141	86510777	protein_coding	Cltc	exon	ENSMUSG00000047126	ProperStrand	319	1	-5.9587
chr4	95290193	95290209	protein_coding	Fggy	exon	ENSMUSG00000028573	ProperStrand	44	chr15	34370551	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-6.9332
chr18	24792895	24793413	protein_coding	Elp2	exon	ENSMUSG00000024271	ProperStrand	46	chr10	23505156	23505236	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.6154
chr11	95911255	95924364	protein_coding	Ube2z	utr3	ENSMUSG00000014349	ProperStrand	41	chr16	23110902	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.4411
chr2	130202290	130202370	LTR	MTD	MaLR	chr2MTD130202313	ProperStrand	1	chr11	3052348	3052438	protein_coding	Sfi1	intron	ENSMUSG00000023764	NonProperStrand	20	1	-inf
chr5	149860122	149860178	protein_coding	Hmgb1	utr3	ENSMUSG00000066551	ProperStrand	99	chr18	33954827	33954917	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	5	-11.9580
chr18	61874923	61874955	protein_coding	Grpel2	utr3	ENSMUSG00000024580	ProperStrand	27	chr1	162967516	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-8.2686
chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	chr4	32833468	32833516	protein_coding	Mdn1	exon	ENSMUSG00000058006	ProperStrand	184	1	-8.5196
chr5	117733014	117733047	protein_coding	Pebp1	utr3	ENSMUSG00000032959	ProperStrand	54	chrX	71517852	71517952	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-6.7544
chr15	98604924	98606960	protein_coding	Wnt10b	exon	ENSMUSG00000022996	NonProperStrand	189	chr11	62416621	62416642	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-3.0170
chr10	72437415	72437431	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr1	162965530	162965596	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	5	-1.7609
chr15	94416762	94416801	protein_coding	Twf1	intron	ENSMUSG00000022451	ProperStrand	32	chr19	40800656	40800672	protein_coding	Entpd1	exon	ENSMUSG00000048120	ProperStrand	5	1	-19.1153
chr13	21814138	21814217	protein_coding	Hist1h2bm	exon	ENSMUSG00000058189	ProperStrand	15	chr10	90581105	90581195	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	14	-inf
chr13	38593293	38593393	protein_coding	Txndc5	utr3	ENSMUSG00000038991	ProperStrand	48	chr17	13112516	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-5.0103
chr7	108912195	108921669	protein_coding	Clpb	exon	ENSMUSG00000001829	ProperStrand	44	chr5	130300445	130300525	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.0546
chr5	74032681	74032771	protein_coding	Sgcb	intron	ENSMUSG00000029156	ProperStrand	14	chr19	8800378	8800458	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-6.3636
chr11	95135995	95136085	protein_coding	Myst2	utr3	ENSMUSG00000038909	ProperStrand	56	chr18	35716793	35716873	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.2842
chr15	95050371	95050387	protein_coding	Nell2	utr3	ENSMUSG00000022454	ProperStrand	64	chr9	15119630	15119692	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.5183
chr14	14919985	14920002	protein_coding	Atxn7	exon	ENSMUSG00000021738	ProperStrand	6	chr11	97642960	97643092	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	5	-21.1079
chr17	85482653	85489599	protein_coding	Prepl	utr5	ENSMUSG00000024127	ProperStrand	106	chr8	72287172	72287188	protein_coding	Zfp866	utr3	ENSMUSG00000043090	NonProperStrand	134	1	-10.5571
chr5	75473198	75473215	protein_coding	Gsx2	utr3	ENSMUSG00000035946	ProperStrand	307	chr15	34372462	34372533	protein_coding	Rpl30	exon	ENSMUSG00000058600	ProperStrand	65	1	-9.8809
chr2	90235294	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	168209715	168209732	protein_coding	Ildr2	intron	ENSMUSG00000040612	NonProperStrand	26	1	-6.0972
chr12	81735225	81735295	protein_coding	Erh	utr3	ENSMUSG00000021131	ProperStrand	20	chr9	30235085	30235101	protein_coding	Snx19	exon	ENSMUSG00000031993	ProperStrand	353	2	-19.4130
chr17	33803451	33803604	protein_coding	Hnrnpm	exon	ENSMUSG00000059208	ProperStrand	56	chr1	162966814	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-6.3953
chr19	41659670	41659770	protein_coding	Gm340	exon	ENSMUSG00000090673	ProperStrand	19	chr15	34370545	34370620	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-9.4665
chr15	83407223	83407254	protein_coding	Ttll12	utr3	ENSMUSG00000016757	ProperStrand	36	chr7	52382856	52384077	protein_coding	Rpl13a	exon	ENSMUSG00000074129	ProperStrand	269	9	-21.3125
chr15	12091906	12091961	protein_coding	Zfr	exon	ENSMUSG00000022201	ProperStrand	48	chr2	145076803	145209251	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-8.1699
chr11	120500937	120500963	protein_coding	Pycr1	utr3	ENSMUSG00000025140	ProperStrand	17	chr16	96391545	96391613	protein_coding	Lca5l	intron	ENSMUSG00000045275	NonProperStrand	210	3	-inf
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-5.4320
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr1	158254218	158254237	protein_coding	Nphs2	intron	ENSMUSG00000026602	ProperStrand	3	1	-14.9913
chr3	152450610	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	chr8	3603815	3603918	protein_coding	Camsap3	exon	ENSMUSG00000044433	ProperStrand	86	1	-8.0844
chr12	117699309	117699420	protein_coding	Ncapg2	utr3	ENSMUSG00000042029	ProperStrand	20	chr9	15119368	15119397	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-7.2896
chr5	65952377	65952395	protein_coding	Ube2k	intron	ENSMUSG00000029203	ProperStrand	289	chr11	98878372	98878468	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	2	-5.6109
chr4	116875204	116875249	snRNA	ENSMUSG00000070228_U5	.	ENSMUSG00000070228	ProperStrand	131	chr1	39605592	39605694	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	3	-13.3878
chr11	69483212	69483320	protein_coding-noncoding	Eif4a1	utr3	ENSMUSG00000059796	ProperStrand	68	chr9	15118328	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	3	-8.1638
chr11	52214380	52214460	protein_coding	9530068E07Rik	intron	ENSMUSG00000036275	ProperStrand	13	chr10	23505151	23505241	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-13.0797
chr12	17552946	17553090	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr11	62416951	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	7	-2.4764
chr5	138050289	138050336	protein_coding	Pcolce	exon	ENSMUSG00000029718	ProperStrand	63	chr11	6428035	6428088	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-5.3499
chr1	178699603	178699879	protein_coding	Cep170	exon	ENSMUSG00000057335	ProperStrand	21	chr12	60141322	60141402	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-8.9403
chr6	7087583	7087601	LINE	Lx4A	L1	chr6Lx4A7087552	NonProperStrand	9	chr7	58851580	58851597	protein_coding	Ano5	utr3	ENSMUSG00000055489	ProperStrand	13	1	-19.2772
chr2	34681611	34681629	protein_coding-noncoding	Fbxw2	utr3	ENSMUSG00000035949	NonProperStrand	10	chr17	57160866	57160938	protein_coding	Khsrp	utr3	ENSMUSG00000007670	ProperStrand	353	1	-13.4326
chr2	9781257	9781273	protein_coding	Gata3	intron	ENSMUSG00000015619	ProperStrand	12	chr17	24343586	24343602	protein_coding	Ntn3	exon	ENSMUSG00000079662	ProperStrand	237	1	-13.8426
chr16	36071984	36072000	protein_coding	Ccdc58	utr5	ENSMUSG00000075229	NonProperStrand	55	chr5	121655030	121655096	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.9102
chr3	35824685	35824763	protein_coding	Dcun1d1	intron	ENSMUSG00000027708	ProperStrand	14	chr17	24857716	24857785	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.9973
chr1	90652120	90652161	LTR	RLTR9A	ERVK	chr1RLTR9A90652040	ProperStrand	1	chr16	23110891	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chrX	69251174	69251190	protein_coding	Cnga2	intron	ENSMUSG00000005864	NonProperStrand	7	chr7	13516187	13516203	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	1	-13.0895
chr2	146125209	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	chr7	116664818	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-0.8817
chr2	158451026	158457364	protein_coding	Actr5	exon	ENSMUSG00000037761	NonProperStrand	94	chr4	131865859	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	6	-8.6228
chr9	68512370	68512387	protein_coding-noncoding	Rora	utr5	ENSMUSG00000032238	NonProperStrand	1	chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	1	-inf
chr2	32818802	32818941	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	chr8	32260335	32260425	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	10	-1.9079
chr17	35275623	35279747	protein_coding	Bag6	exon	ENSMUSG00000024392	ProperStrand	181	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	3	-4.8513
chr9	40613029	40613046	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr9	72589483	72590493	protein_coding	Nedd4	exon	ENSMUSG00000032216	ProperStrand	308	1	-4.9211
chr4	148635160	148635228	protein_coding	Kif1b	intron	ENSMUSG00000063077	ProperStrand	60	chr5	74489640	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-3.7780
chr4	57252448	57252475	protein_coding	Ptpn3	exon	ENSMUSG00000038764	ProperStrand	48	chr11	69483190	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.8373
chr10	23506287	23506348	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	chr1	162966818	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	3	-2.6388
chr9	20724428	20757215	protein_coding	Dnmt1	exon	ENSMUSG00000004099	ProperStrand	91	chrX	34622906	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-4.3104
chr6	125307868	125308083	protein_coding	Tnfrsf1a	exon	ENSMUSG00000030341	ProperStrand	6	chr7	116664794	116664884	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	4	-19.4535
chr7	51828028	51828044	protein_coding	Napsa	exon	ENSMUSG00000002204	ProperStrand	88	chr4	131865867	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.2107
chr2	105012751	105012769	protein_coding	Wt1	utr3	ENSMUSG00000016458	NonProperStrand	338	chr9	15119642	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-0.7947
chr1	38941229	38941258	protein_coding	Chst10	exon	ENSMUSG00000026080	ProperStrand	4	chr16	23111451	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-6.3168
chr14	61362537	61362555	protein_coding	Spata13	intron	ENSMUSG00000021990	ProperStrand	28	chr19	8963090	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.6314
chrX	45525181	45525289	protein_coding	Zdhhc9	utr3	ENSMUSG00000036985	ProperStrand	32	chr7	29136632	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	15	-20.6576
chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	chr12	110923174	110923231	snoRNA	ENSMUSG00000084487_SNORD113	.	ENSMUSG00000084487	ProperStrand	183	1	-6.2904
chr7	150414606	150414653	protein_coding	Kcnq1	intron	ENSMUSG00000009545	NonProperStrand	133	chr15	76266272	76266442	protein_coding	Heatr7a	exon	ENSMUSG00000022558	ProperStrand	48	1	-12.1645
chr3	14588600	14588618	protein_coding	E2f5	intron	ENSMUSG00000027552	NonProperStrand	17	chr8	13416897	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-8.9928
chr8	108734706	108734781	protein_coding	Slc7a6os	exon	ENSMUSG00000033106	ProperStrand	9	chr19	9090145	9090235	protein_coding	Ahnak	exon	ENSMUSG00000069833	ProperStrand	103	1	-16.1117
chr4	114741487	114741504	protein_coding	Tal1	utr3	ENSMUSG00000028717	NonProperStrand	69	chr7	29136525	29136580	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.1324
chr13	58349852	58349899	protein_coding	Gkap1	intron	ENSMUSG00000021552	ProperStrand	22	chr5	130300434	130300524	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.3511
chr17	24823138	24823249	protein_coding	Syngr3	utr3	ENSMUSG00000007021	ProperStrand	2	chr7	116663724	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-inf
chr1	24621185	24621223	protein_coding	Gm10925	utr3	ENSMUSG00000090378	ProperStrand	320	chr6	115757992	115758092	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-2.3788
chr6	122836846	122837402	protein_coding	Necap1	exon	ENSMUSG00000030327	ProperStrand	12	chr17	24665420	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	6	-20.4702
chr1	102076758	102076794	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	chr11	62418013	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	2	-3.6367
chr15	43342418	43343313	protein_coding	Ttc35	exon	ENSMUSG00000022337	ProperStrand	2	chr11	106362327	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-13.2734
chr2	180610252	180610270	lincRNA	Gm14342	intron	ENSMUSG00000086166	NonProperStrand	18	chr13	96100639	96100697	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	1	-10.5046
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr2	119629038	119629138	protein_coding	Tyro3	exon	ENSMUSG00000027298	ProperStrand	35	1	-6.9727
chr2	165122439	165122458	protein_coding	Elmo2	exon	ENSMUSG00000017670	ProperStrand	14	chr5	144007821	144007837	protein_coding	Zfp12	utr3	ENSMUSG00000029587	ProperStrand	5	1	-20.6519
chrX	91436157	91436257	protein_coding	Eif2s3x	utr3	ENSMUSG00000035150	ProperStrand	55	chr3	153575091	153575115	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	4	-18.9664
chr4	116828188	116828207	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	chr8	59991434	59991450	protein_coding	Hmgb2	exon	ENSMUSG00000054717	NonProperStrand	96	1	-9.4153
chr14	124353869	124353886	protein_coding	Itgbl1	exon	ENSMUSG00000032925	ProperStrand	159	chr11	100181999	100182028	protein_coding	Eif1	exon	ENSMUSG00000035530	ProperStrand	115	1	-10.0515
chr10	127152705	127152721	protein_coding	Myo1a	exon	ENSMUSG00000025401	ProperStrand	93	chr17	39985694	39985725	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-5.0770
chr18	74527376	74527393	LTR	LTRIS4	ERV1	chr18LTRIS474527156	NonProperStrand	1	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr3	156224612	156224628	lincRNA	4930570G19Rik	exon	ENSMUSG00000085084	ProperStrand	326	chr12	110923175	110923231	snoRNA	ENSMUSG00000084487_SNORD113	.	ENSMUSG00000084487	ProperStrand	183	1	-7.6939
chr3	88373263	88373286	protein_coding	Ubqln4	utr3	ENSMUSG00000008604	ProperStrand	49	chr5	108336444	108336491	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-5.2741
chr4	116826502	116826592	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	chr4	131866159	131866239	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-1.2274
chr9	60696451	60697299	protein_coding	Uaca	exon	ENSMUSG00000034485	ProperStrand	109	chr4	131865868	131865948	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.9361
chr14	35226849	35226865	protein_coding	Bmpr1a	utr3	ENSMUSG00000021796	NonProperStrand	2	chr4	131908689	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-8.0336
chr14	48161816	48161887	protein_coding	Atg14	utr3	ENSMUSG00000037526	ProperStrand	12	chr14	76247708	76247798	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-11.9232
chr8	19473232	19473251	pseudogene	Defa-ps15	.	ENSMUSG00000080894	NonProperStrand	1	chr7	88674817	88674867	snoRNA	ENSMUSG00000093107_AC167122.1	.	ENSMUSG00000093107	ProperStrand	110	1	-inf
chr5	38619312	38622123	protein_coding	Lyar	exon	ENSMUSG00000067367	ProperStrand	33	chr4	131865890	131865981	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-4.8432
chr13	113750366	113750407	protein_coding	Dhx29	exon	ENSMUSG00000042426	ProperStrand	15	chr16	23110913	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.0842
chr2	8759556	8759573	LINE	Lx	L1	chr2Lx8759488	ProperStrand	36	chr4	131865867	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.6115
chr5	42136455	42136473	Low_complexity	GA-rich	Low_complexity	chr5GA-rich42136449	NonProperStrand	106	chr7	116664810	116664922	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.6270
mmu-miR-6240	4	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr8	123191717	123191841	protein_coding	Cox4nb	exon	ENSMUSG00000031819	ProperStrand	21	3	-17.6744
chr2	90235286	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr12	112565198	112565215	protein_coding	Cdc42bpb	intron	ENSMUSG00000021279	ProperStrand	128	2	-5.2666
chr5	108334195	108336490	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	chr7	118219574	118219655	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	13	-0.7024
chr11	98312228	98312423	protein_coding	Grb7	exon	ENSMUSG00000019312	ProperStrand	10	chr6	70805454	70805534	snoRNA	ENSMUSG00000065750_SNORA5	.	ENSMUSG00000065750	ProperStrand	165	1	-14.9531
chr7	51869666	51869713	protein_coding	Myh14	exon	ENSMUSG00000030739	NonProperStrand	11	chrX	159209079	159210153	protein_coding	Rbbp7	exon	ENSMUSG00000031353	ProperStrand	48	1	-17.2022
chr17	27236036	27236052	protein_coding	Itpr3	exon	ENSMUSG00000042644	ProperStrand	137	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-7.2800
chr5	136707644	136707661	protein_coding	Sh2b2	exon	ENSMUSG00000005057	NonProperStrand	101	chr1	5593729	5593746	protein_coding	Oprk1	utr3	ENSMUSG00000025905	ProperStrand	6	1	-16.9713
chr9	88275013	88275080	protein_coding	Snx14	exon	ENSMUSG00000032422	ProperStrand	13	chr1	162966819	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	3	-20.0907
chr17	66798640	66798675	protein_coding	1110012J17Rik	exon	ENSMUSG00000052105	ProperStrand	60	chr1	192712615	192712631	protein_coding	Rps6kc1	exon	ENSMUSG00000089872	ProperStrand	241	1	-10.5254
chr11	119136228	119136244	protein_coding	Gaa	exon	ENSMUSG00000025579	NonProperStrand	201	chr4	140121137	140121154	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	1	-9.2476
chr6	115992974	115993044	protein_coding	Tmcc1	exon	ENSMUSG00000030126	ProperStrand	5	chr2	26493364	26493452	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-8.7753
chr6	38554548	38554596	protein_coding	Luc7l2	utr3	ENSMUSG00000029823	ProperStrand	85	chr4	131908689	131908708	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.7895
chr3	90197173	90197671	protein_coding	Ints3	exon	ENSMUSG00000027933	ProperStrand	87	chr5	108336377	108336409	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-4.1709
chr2	158182156	158182181	lincRNA	9430008C03Rik	intron	ENSMUSG00000085385	ProperStrand	1039	chr5	122907543	122907614	protein_coding	Atp2a2	exon	ENSMUSG00000029467	ProperStrand	166	2	-9.1510
chr1	145506238	145506255	protein_coding	Cdc73	intron	ENSMUSG00000026361	NonProperStrand	26	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.8576
chr4	40131973	40132073	protein_coding	Aco1	exon	ENSMUSG00000028405	ProperStrand	25	chr19	8798757	8798812	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-6.5239
chr1	139976731	139976747	protein_coding	Ptprc	exon	ENSMUSG00000026395	ProperStrand	27	chr5	3693225	3693241	protein_coding	Ankib1	exon	ENSMUSG00000040351	NonProperStrand	98	1	-13.9473
chr7	148426864	148429757	protein_coding	Phrf1	exon	ENSMUSG00000038611	ProperStrand	86	chrX	34622906	34622964	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-2.5366
chr1	94833350	94833370	protein_coding	Capn10	intron	ENSMUSG00000026270	NonProperStrand	1	chr17	27772237	27772258	protein_coding	Rps10	intron	ENSMUSG00000052146	ProperStrand	94	1	-inf
chr17	66797887	66797904	protein_coding	1110012J17Rik	exon	ENSMUSG00000052105	NonProperStrand	38	chr11	68886972	68887009	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-5.0212
chrX	47940263	47940279	lincRNA	6720401G13Rik	intron	ENSMUSG00000085396	NonProperStrand	12	chr7	26057527	26057544	protein_coding	Cic	exon	ENSMUSG00000005442	ProperStrand	80	1	-15.9970
chr5	31782731	31782748	protein_coding	Zfp512	utr3	ENSMUSG00000062761	ProperStrand	44	chr13	51743665	51743704	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-7.4783
chr10	127520378	127523454	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr14	76247723	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	5	-4.2951
chr7	104389568	104389658	protein_coding	Gab2	intron	ENSMUSG00000004508	ProperStrand	4	chrX	19795109	19795199	protein_coding	Slc9a7	intron	ENSMUSG00000037341	ProperStrand	17	1	-24.9237
chr4	154534701	154534801	protein_coding	Ski	exon	ENSMUSG00000029050	ProperStrand	28	chr11	69483136	69483214	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.8243
chr15	74392750	74392768	protein_coding	Bai1	intron	ENSMUSG00000034730	NonProperStrand	56	chr4	131865855	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.8759
chr4	138921530	138921580	protein_coding	C230096C10Rik	exon	ENSMUSG00000078517	ProperStrand	69	chr8	124103116	124103136	protein_coding	Gm20388	intron	ENSMUSG00000092329	NonProperStrand	203	2	-16.6419
chr7	52165155	52171220	protein_coding	Ap2a1	exon	ENSMUSG00000060279	ProperStrand	193	chr4	122970482	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	2	-8.4104
chr10	12902322	12902670	protein_coding	Ltv1	exon	ENSMUSG00000019814	ProperStrand	76	chr11	106362556	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	2	-11.1635
chr7	87022458	87022548	protein_coding	Ap3s2	utr3	ENSMUSG00000063801	ProperStrand	20	chr7	29136526	29136606	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.3737
chr5	109124122	109132306	protein_coding	Fgfrl1	exon	ENSMUSG00000008090	ProperStrand	111	chr17	35087940	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-4.0234
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr9	47608249	47608266	protein_coding	Cadm1	intron	ENSMUSG00000032076	ProperStrand	77	1	-5.4153
chr3	96132451	96132514	snRNA	ENSMUSG00000075978_U1	.	ENSMUSG00000075978	ProperStrand	132	chr4	131866163	131866205	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-2.2703
chr2	104334545	104334562	protein_coding	Hipk3	utr5	ENSMUSG00000027177	ProperStrand	5	chr8	120158316	120158339	protein_coding	Plcg2	exon	ENSMUSG00000034330	ProperStrand	57	1	-17.9753
chr9	78023110	78023199	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr14	20621584	20621602	protein_coding	Nid2	exon	ENSMUSG00000021806	ProperStrand	372	2	-4.3564
chr10	75399071	75399161	protein_coding	Chchd10	exon	ENSMUSG00000049422	ProperStrand	140	chr6	125112668	125112882	protein_coding	Gapdh	exon	ENSMUSG00000057666	ProperStrand	356	34	-19.7068
chr18	16933117	16966848	protein_coding	Cdh2	exon	ENSMUSG00000024304	ProperStrand	71	chr2	63936035	63936053	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-7.5252
chr2	39115983	39116063	LINE	Lx5	L1	chr2Lx539115232	ProperStrand	6	chr10	69653817	69653907	protein_coding	Ccdc6	utr3	ENSMUSG00000048701	ProperStrand	72	1	-17.5625
chr8	27091218	27091234	protein_coding	4930444A02Rik	utr3	ENSMUSG00000037251	NonProperStrand	57	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-7.3052
chr9	15119967	15119992	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	chr10	23506278	23506342	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	4	-5.9109
chr7	35828881	35829330	protein_coding	Pepd	exon	ENSMUSG00000063931	ProperStrand	12	chr17	35087894	35087954	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-8.4310
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	1	-3.9868
chr9	120483354	120483444	protein_coding	Rpl14	exon	ENSMUSG00000025794	ProperStrand	123	chr4	131865866	131865946	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.7947
chr7	142884867	142884911	protein_coding	Mki67	exon	ENSMUSG00000031004	ProperStrand	286	chr2	140831505	140831521	protein_coding	Macrod2	intron	ENSMUSG00000068205	NonProperStrand	20	1	-12.4114
chr2	156329416	156329475	protein_coding	Epb4.1l1	exon	ENSMUSG00000027624	ProperStrand	27	chr8	64232110	64232127	protein_coding	Palld	intron	ENSMUSG00000058056	ProperStrand	39	1	-15.7845
chr18	73693168	73693191	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr1	72272872	72273000	snRNA	ENSMUSG00000075752_U2	.	ENSMUSG00000075752	ProperStrand	535	1	-1.6038
chr10	17619015	17634918	protein_coding	Heca	intron	ENSMUSG00000039879	ProperStrand	13	chr16	23110829	23111010	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-11.9579
mmu-miR-6240	1	25	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr18	74938044	74938144	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	ProperStrand	1022	3	-3.1457
chr10	127428422	127428438	protein_coding	Hsd17b6	exon	ENSMUSG00000025396	NonProperStrand	68	chr8	129468746	129468846	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	4	-13.4506
chr11	87172190	87172206	protein_coding	Ppm1e	exon	ENSMUSG00000046442	ProperStrand	112	chr7	91031861	91031879	protein_coding	Mesdc1	utr5	ENSMUSG00000070462	ProperStrand	19	1	-14.3974
chr5	92502284	92512563	protein_coding	G3bp2	utr5	ENSMUSG00000029405	ProperStrand	78	chr8	73419657	73419729	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-6.9509
chr15	68012619	68012635	protein_coding	Zfat	exon	ENSMUSG00000022335	NonProperStrand	25	chr9	110544350	110544366	protein_coding	Nbeal2	exon	ENSMUSG00000056724	ProperStrand	161	1	-13.1043
chr6	52589227	52589317	snoRNA	ENSMUSG00000064792_SNORA32	.	ENSMUSG00000064792	ProperStrand	151	chr17	24857721	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-1.8743
chr3	96132424	96132514	snRNA	ENSMUSG00000075978_U1	.	ENSMUSG00000075978	ProperStrand	132	chr16	23110470	23110550	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-3.7747
chr6	85298672	85298722	protein_coding	Rab11fip5	exon	ENSMUSG00000051343	ProperStrand	16	chr16	23111372	23111462	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.4608
chr1	93263065	93263082	protein_coding	Fam132b	exon	ENSMUSG00000047443	NonProperStrand	98	chr18	35716763	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-2.6654
chr13	52742450	52742466	protein_coding	Syk	utr3	ENSMUSG00000021457	NonProperStrand	125	chr1	191466650	191466679	protein_coding	Cenpf	exon	ENSMUSG00000026605	ProperStrand	44	1	-12.4651
chr5	109117332	109117422	LTR	ORR1D2	MaLR	chr5ORR1D2109117270	NonProperStrand	1	chr5	109117198	109117278	LTR	RMER10A	ERVL	chr5RMER10A109116918	ProperStrand	1	1	-inf
chr12	70413651	70415416	protein_coding	Nemf	exon	ENSMUSG00000020982	ProperStrand	77	chr4	131908810	131908896	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.9043
chr6	50253339	50253356	protein_coding	Osbpl3	intron	ENSMUSG00000029822	ProperStrand	34	chr11	106362545	106362630	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-8.5432
chr7	114796550	114796630	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	ProperStrand	11	chr16	23110871	23110961	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-4.7202
chr3	52388277	52388294	SINE	B4A	B4	chr3B4A52388218	ProperStrand	169	chr17	34251065	34251342	protein_coding	Brd2	exon	ENSMUSG00000024335	ProperStrand	69	1	-10.9543
chr3	85944539	85944556	snoRNA	ENSMUSG00000064390_Rnu73b	.	ENSMUSG00000064390	ProperStrand	164	chr15	79908956	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-3.5594
mmu-miR-6240	2	25	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr13	68759738	68764669	protein_coding	Adcy2	exon	ENSMUSG00000021536	ProperStrand	237	2	-5.6224
chr14	92256597	92256687	LINE	Lx4B	L1	chr14Lx4B92256542	NonProperStrand	1	chr16	80538225	80538315	LINE	Lx4A	L1	chr16Lx4A80538057	NonProperStrand	1	1	-inf
chr8	3509159	3509232	protein_coding	Mcoln1	exon	ENSMUSG00000004567	NonProperStrand	2	chr5	130300462	130300533	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	NonProperStrand	11	2	-inf
chr11	15357011	15357101	LINE	L1_Mur3	L1	chr11L1_Mur315356889	ProperStrand	1	chr11	15357137	15357217	LINE	L1_Mur3	L1	chr11L1_Mur315357132	ProperStrand	1	1	-inf
chr11	94327810	94327826	protein_coding	Cacna1g	intron	ENSMUSG00000020866	ProperStrand	35	chrX	148354552	148354612	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	1	-10.1508
chr1	72166839	72166855	SINE	B4A	B4	chr1B4A72166632	ProperStrand	19	chr1	74398657	74398674	protein_coding	Pnkd	utr3	ENSMUSG00000026179	NonProperStrand	5	1	-19.6020
chr7	117415670	117415760	protein_coding	Swap70	intron	ENSMUSG00000031015	NonProperStrand	3	chr7	117415342	117415432	protein_coding	Swap70	intron	ENSMUSG00000031015	ProperStrand	47	1	-inf
chr16	64770796	64770813	protein_coding	4930453N24Rik	utr5	ENSMUSG00000059920	ProperStrand	39	chr9	64023228	64023286	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	1	-9.3110
chr16	17925450	17925550	protein_coding	Slc25a1	utr3	ENSMUSG00000003528	ProperStrand	23	chr1	162967539	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-5.3087
chrX	156315498	156315519	protein_coding	Sh3kbp1	intron	ENSMUSG00000040990	ProperStrand	67	chr11	69483136	69483204	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.2638
chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	chr4	116827119	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-3.6144
chr11	43511258	43511312	protein_coding	Pwwp2a	intron	ENSMUSG00000044950	ProperStrand	22	chr9	120037896	120037986	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-6.6827
chr11	98656738	98656761	Low_complexity	G-rich	Low_complexity	chr11G-rich98656707	ProperStrand	1	chr15	83208143	83209511	protein_coding	Pacsin2	exon	ENSMUSG00000016664	ProperStrand	30	1	-inf
chr2	22444150	22444982	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	chr11	97642952	97643084	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	19	-8.8314
chr3	103158003	103158121	protein_coding	Trim33	utr3	ENSMUSG00000033014	ProperStrand	55	chr4	131908418	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.5458
chr6	124762929	124764113	protein_coding	Tpi1	exon	ENSMUSG00000023456	ProperStrand	94	chr2	32818832	32818883	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	6	-20.2124
chr2	23370673	23370763	protein_coding	Spopl	exon	ENSMUSG00000026771	ProperStrand	5	chr4	131908815	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.7672
chr6	128324512	128324529	protein_coding	Foxm1	utr3	ENSMUSG00000001517	NonProperStrand	66	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.1039
chr10	17443077	17443094	protein_coding	Cited2	utr5	ENSMUSG00000039910	ProperStrand	64	chr2	158205279	158205405	snoRNA	ENSMUSG00000064585_SNORA71	.	ENSMUSG00000064585	ProperStrand	418	4	-inf
chr17	57402674	57402711	protein_coding	Trip10	utr3	ENSMUSG00000019487	ProperStrand	8	chr9	72579194	72580415	protein_coding	Nedd4	exon	ENSMUSG00000032216	ProperStrand	308	2	-18.9298
chr6	121144056	121144153	protein_coding	Pex26	utr3	ENSMUSG00000067825	ProperStrand	2	chr2	26768416	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-13.0236
chr11	115444477	115444557	protein_coding-noncoding	Nup85	utr5	ENSMUSG00000020739	ProperStrand	2	chr11	115444659	115444749	protein_coding	Nup85	exon	ENSMUSG00000020739	ProperStrand	33	1	-19.7718
chr8	4159293	4159383	SINE	PB1D9	Alu	chr8PB1D94159291	NonProperStrand	1	chr8	4159466	4159556	SINE	PB1D9	Alu	chr8PB1D94159490	NonProperStrand	1	1	-inf
chrX	148369120	148369137	protein_coding	Huwe1	utr3	ENSMUSG00000025261	NonProperStrand	15	chr4	131865380	131865456	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-6.7250
chr11	59646547	59646572	protein_coding	Cops3	exon	ENSMUSG00000019373	ProperStrand	19	chr18	35716697	35716727	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-7.1642
chr17	24814051	24814365	protein_coding	Zfp598	exon	ENSMUSG00000041130	ProperStrand	26	chr7	51505505	51505585	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	1	-10.4685
chr11	62951997	62952014	protein_coding	Pmp22	intron	ENSMUSG00000018217	NonProperStrand	40	chr17	24857794	24857853	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-5.2036
chr15	76005537	76005553	protein_coding	Plec	exon	ENSMUSG00000022565	ProperStrand	186	chr10	90581137	90581174	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-2.7172
chr11	75319862	75319918	protein_coding	Prpf8	utr3	ENSMUSG00000020850	ProperStrand	255	chr10	39978376	39978466	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	3	-7.1099
chr19	45010989	45057501	protein_coding	Fam178a	exon	ENSMUSG00000036097	ProperStrand	29	chr4	131908300	131908431	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-6.8625
chr14	8550048	8550128	LINE	L1MB7	L1	chr14L1MB78550008	NonProperStrand	1	chr14	8550282	8550372	LINE	Lx8	L1	chr14Lx88550300	ProperStrand	1	1	-inf
chr3	136526736	136526753	protein_coding	Ppp3ca	intron	ENSMUSG00000028161	NonProperStrand	120	chrX	84483698	84483727	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-6.8697
chr10	80991749	80991839	protein_coding	Gna11	utr3	ENSMUSG00000034781	ProperStrand	23	chr2	160864996	160865044	protein_coding	Chd6	exon	ENSMUSG00000057133	ProperStrand	104	1	-14.1528
chr5	149143135	149143196	protein_coding	Slc7a1	utr3	ENSMUSG00000041313	ProperStrand	65	chr8	73419657	73419724	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.9868
chr15	12251612	12251628	protein_coding	Golph3	exon	ENSMUSG00000022200	ProperStrand	35	chr5	121655061	121655126	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.7731
chr12	111891497	111891587	protein_coding	Dync1h1	intron	ENSMUSG00000018707	NonProperStrand	7	chr16	11144150	11144230	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	1	-14.8847
chr9	120483261	120483289	protein_coding	Rpl14	exon	ENSMUSG00000025794	ProperStrand	123	chr8	73419657	73419776	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-1.9084
chr5	23947762	23947827	protein_coding	Fastk	exon	ENSMUSG00000028959	ProperStrand	13	chr11	4820972	4820990	protein_coding	Thoc5	intron	ENSMUSG00000034274	ProperStrand	325	2	-19.3715
chr17	24857651	24857978	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr10	39978349	39978429	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-2.1148
chr2	51966679	51966779	protein_coding	Rif1	exon	ENSMUSG00000036202	ProperStrand	201	chr9	120037998	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-2.4928
chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	chr9	15118557	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	1	-6.3299
chr9	54768317	54768333	protein_coding	Agphd1	exon	ENSMUSG00000035878	NonProperStrand	19	chr16	20207573	20207589	protein_coding	Yeats2	intron	ENSMUSG00000041215	NonProperStrand	23	1	-17.4393
chr2	26493396	26493486	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr11	87275914	87284958	snoRNA	ENSMUSG00000070190_U3	.	ENSMUSG00000070190	ProperStrand	2	1	-11.0703
chr2	90857246	90857276	protein_coding	Celf1	utr3	ENSMUSG00000005506	ProperStrand	61	chr8	73419657	73419709	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.1005
chr9	15120968	15121035	snoRNA	ENSMUSG00000065265_SNORA32	.	ENSMUSG00000065265	ProperStrand	101	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	5	-5.2426
chr2	29108090	29108108	processed_transcript	6530402F18Rik	.	ENSMUSG00000079499	ProperStrand	4	chr1	84819981	84820030	protein_coding	Trip12	intron	ENSMUSG00000026219	ProperStrand	248	2	-19.7056
chr6	146259607	146261399	protein_coding	Itpr2	exon	ENSMUSG00000030287	ProperStrand	20	chr11	62416577	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-11.8454
chr1	36563257	36563340	protein_coding	Cnnm4	exon	ENSMUSG00000037408	ProperStrand	12	chr9	120038635	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-10.0895
chr1	193430978	193431078	protein_coding	Ints7	intron	ENSMUSG00000037461	ProperStrand	108	chr1	162966220	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-6.4103
chr6	114260511	114260527	protein_coding	Slc6a1	exon	ENSMUSG00000030310	NonProperStrand	147	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-5.9663
chr2	158185532	158185632	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr8	113366285	113366328	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	2	-4.5431
chr5	123967836	123968033	protein_coding	Diablo	exon	ENSMUSG00000029433	NonProperStrand	19	chr4	131865913	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	19	-inf
chr8	125626776	125626803	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	chr11	57874463	57874509	protein_coding	Larp1	utr3	ENSMUSG00000037331	ProperStrand	201	1	-8.1915
chr8	129360248	129360338	DNA	Kanga2_a	Tc2	chr8Kanga2_a129360204	NonProperStrand	1	chr8	129360413	129360493	LTR	MTB_Mm	MaLR	chr8MTB_Mm129360337	NonProperStrand	1	1	-inf
chr11	62366027	62366117	protein_coding	Ubb	exon	ENSMUSG00000019505	ProperStrand	32	chr7	116664841	116664921	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.6812
chr14	20621727	20621758	protein_coding	Nid2	exon	ENSMUSG00000021806	ProperStrand	372	chr18	33954874	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-0.6974
chr7	34917656	34917756	protein_coding	Wtip	exon	ENSMUSG00000036459	ProperStrand	19	chr2	166890502	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-9.8795
chr6	139875074	139875093	protein_coding	Pik3c2g	intron	ENSMUSG00000030228	NonProperStrand	6	chr2	33066908	33066978	protein_coding	Ralgps1	intron	ENSMUSG00000038831	ProperStrand	75	3	-19.7265
chr3	88438372	88438432	protein_coding	Arhgef2	exon	ENSMUSG00000028059	ProperStrand	13	chr7	118219574	118219644	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	5	-22.8909
chr1	11172108	11174535	protein_coding	Prex2	exon	ENSMUSG00000048960	ProperStrand	12	chr15	98350202	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	2	-12.8477
chr5	144946518	144946581	protein_coding	Lmtk2	utr3	ENSMUSG00000038970	ProperStrand	60	chr7	52381972	52382008	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-6.7119
chr14	31827478	31827516	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	chr15	79908956	79909021	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	8	-7.3180
chr6	82682177	82684918	protein_coding	Hk2	exon	ENSMUSG00000000628	ProperStrand	88	chr7	116663649	116663729	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	12	-inf
chr15	74683509	74683525	protein_coding	Cyp11b2	exon	ENSMUSG00000022589	NonProperStrand	3	chr3	108357359	108357393	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-10.8227
chr11	57311388	57311414	protein_coding	Fam114a2	intron	ENSMUSG00000020523	ProperStrand	25	chr1	162965984	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	3	-12.4641
chr19	42022797	42024004	protein_coding	Mms19	exon	ENSMUSG00000025159	ProperStrand	52	chr11	6519823	6519913	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	4	-inf
chr9	19462131	19462340	LINE	L1Md_A	L1	chr9L1Md_A19461964	NonProperStrand	28	chr7	54441835	54442437	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	2	-18.8510
chr10	119668303	119668483	protein_coding	Llph	exon	ENSMUSG00000020224	ProperStrand	9	chr7	116664794	116664884	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-14.6571
chr10	126634604	126634684	protein_coding	Pip4k2c	utr3	ENSMUSG00000025417	ProperStrand	12	chr15	34370543	34370633	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-6.6995
chr7	151765212	151765228	antisense	Gm10574	.	ENSMUSG00000073778	ProperStrand	357	chr2	93570472	93579742	protein_coding	Ext2	exon	ENSMUSG00000027198	ProperStrand	49	1	-10.1481
chr16	30582156	30582624	protein_coding	Lsg1	exon	ENSMUSG00000022538	ProperStrand	25	chr7	151033434	151033524	protein_coding	Dhcr7	utr3	ENSMUSG00000058454	ProperStrand	30	1	-16.5621
chr17	56558498	56558873	protein_coding	Ptprs	exon	ENSMUSG00000013236	ProperStrand	152	chr11	82718821	82718859	protein_coding	Nle1	exon	ENSMUSG00000020692	ProperStrand	13	1	-14.5675
chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	chr7	3155479	3155522	protein_coding	AU018091	utr3	ENSMUSG00000054753	ProperStrand	42	1	-9.9056
chr2	119461321	119470383	protein_coding	Nusap1	intron	ENSMUSG00000027306	ProperStrand	11	chr16	23110905	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-4.7202
chr1	59541482	59541510	protein_coding	Fzd7	exon	ENSMUSG00000041075	ProperStrand	373	chr7	116664794	116664907	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-1.1287
chr5	123589454	123589500	lincRNA	AI480526	intron	ENSMUSG00000090086	ProperStrand	2	chr11	6428092	6428154	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-10.4671
chr5	136385341	136385431	protein_coding	Ywhag	utr3	ENSMUSG00000051391	ProperStrand	142	chr7	116663682	116663762	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.1805
chr19	32322858	32322875	protein_coding	Sgms1	intron	ENSMUSG00000040451	NonProperStrand	7	chr4	131908753	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.0493
chr1	88247406	88247516	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chr2	30172734	30172777	protein_coding	Nup188	exon	ENSMUSG00000052533	ProperStrand	96	1	-6.4253
chr16	62900544	62900562	protein_coding	Pros1	intron	ENSMUSG00000022912	ProperStrand	20	chr9	21599720	21599793	protein_coding	Kank2	exon	ENSMUSG00000032194	ProperStrand	196	1	-13.1692
chr1	185857228	185857244	protein_coding	1700056E22Rik	exon	ENSMUSG00000044854	ProperStrand	173	chr2	26494708	26494760	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.3768
chr4	134926614	134927796	protein_coding	A330049M08Rik	exon	ENSMUSG00000043924	ProperStrand	130	chr11	97643021	97643084	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.2682
chr9	110544350	110544366	protein_coding	Nbeal2	exon	ENSMUSG00000056724	ProperStrand	161	chr1	162967516	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-1.7844
chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	chr4	3762381	3762420	protein_coding	Rps20	exon	ENSMUSG00000028234	ProperStrand	71	1	-8.9323
chr11	97639601	97639648	protein_coding	Rpl23	exon	ENSMUSG00000071415	ProperStrand	920	chr12	81492598	81492708	snoRNA	ENSMUSG00000088158_Scarna3b	.	ENSMUSG00000088158	ProperStrand	147	1	-6.0818
chr7	29171540	29171558	protein_coding	Med29	utr3	ENSMUSG00000003444	NonProperStrand	134	chr16	23109024	23109093	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-5.6964
chr9	20890748	20890794	protein_coding	Raver1	exon	ENSMUSG00000010205	ProperStrand	69	chr17	13112451	13112541	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-4.3130
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr11	106362556	106362635	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-1.5223
chr7	24779190	24779213	SINE	ID_B1	B4	chr7ID_B124779183	NonProperStrand	54	chr18	70632365	70632858	protein_coding	Stard6	utr5	ENSMUSG00000079608	ProperStrand	4	1	-18.8381
chr1	75173918	75173985	protein_coding	Abcb6	exon	ENSMUSG00000026198	ProperStrand	9	chr16	23110539	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-6.0870
chr17	13069228	13069244	protein_coding	Mrgprh	utr5	ENSMUSG00000059408	NonProperStrand	8	chr9	120037974	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-8.7708
chr6	122680138	122681458	protein_coding	Slc2a3	exon	ENSMUSG00000003153	ProperStrand	682	chr4	126703409	126703426	protein_coding	Sfpq	exon	ENSMUSG00000028820	ProperStrand	340	1	-5.0328
chr15	84101747	84103941	protein_coding	Parvb	exon	ENSMUSG00000022438	ProperStrand	127	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-8.9255
chr13	14810242	14810322	DNA	Charlie13a	Charlie	chr13Charlie13a14810156	ProperStrand	1	chr13	14810055	14810145	LTR	MTC	MaLR	chr13MTC14809792	NonProperStrand	1	1	-inf
chr9	108594650	108594669	protein_coding	Prkar2a	utr5	ENSMUSG00000032601	ProperStrand	43	chr11	51507068	51507109	protein_coding	Sec24a	utr3	ENSMUSG00000036391	ProperStrand	42	1	-14.7159
chrX	166427827	166427917	protein_coding	Mid1	utr3	ENSMUSG00000035299	ProperStrand	209	chr5	121655017	121655097	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-1.6134
chr8	86094748	86094848	protein_coding	Ndufb7	exon	ENSMUSG00000033938	ProperStrand	7	chr1	162968218	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-11.2228
chr2	172957823	172957841	antisense	1300015D01Rik	.	ENSMUSG00000087382	ProperStrand	34	chr1	173433177	173433291	protein_coding	B930036N10Rik	utr3	ENSMUSG00000091993	ProperStrand	150	1	-12.6211
chr12	73317935	73318408	protein_coding	Rtn1	exon	ENSMUSG00000021087	NonProperStrand	10	chr14	76247725	76247776	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-7.7404
chr2	76730588	76730604	protein_coding	Ttn	exon	ENSMUSG00000051747	ProperStrand	66	chr15	79908931	79908956	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-5.2867
chr11	58682398	58682415	protein_coding	2810021J22Rik	utr5	ENSMUSG00000020491	ProperStrand	162	chr11	106362639	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-5.4474
chr10	42576608	42576643	LTR	ORR1A3	MaLR	chr10ORR1A342576615	ProperStrand	14	chr10	39978328	39978418	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	2	-13.4328
chr7	31895791	31899711	protein_coding	Hpn	utr5	ENSMUSG00000001249	ProperStrand	126	chr12	60144604	60144645	protein_coding	Trappc6b	utr3	ENSMUSG00000020993	ProperStrand	6	1	-16.5791
chr4	57777579	57777597	protein_coding	Akap2	intron	ENSMUSG00000038729	ProperStrand	14	chr2	130101971	130102051	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-8.2730
chr16	18249766	18249783	protein_coding	Trmt2a	exon	ENSMUSG00000022721	NonProperStrand	4	chr3	108357527	108357547	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-10.1312
chr8	107853473	107853529	protein_coding	Tmem208	intron	ENSMUSG00000014856	ProperStrand	4	chr18	35716835	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-7.5042
chr4	42997224	42997292	protein_coding	Vcp	exon	ENSMUSG00000028452	ProperStrand	108	chr4	131866221	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	9	-20.4155
chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr11	106874189	106874212	tRNA	tRNA945-ArgCCG	.	1491250	ProperStrand	133	1	-2.1924
chr11	106683288	106683316	protein_coding	Smurf2	utr3	ENSMUSG00000018363	ProperStrand	79	chr17	24665444	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	3	-10.5813
chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	chr9	65049532	65049565	snRNA	ENSMUSG00000075930_U5	.	ENSMUSG00000075930	ProperStrand	175	1	-7.7345
chr3	88124961	88125001	protein_coding	Cct3	exon	ENSMUSG00000001416	ProperStrand	82	chr4	141031287	141031304	protein_coding	Spen	exon	ENSMUSG00000040761	ProperStrand	161	1	-10.7046
chr8	87579965	87580065	protein_coding	Tnpo2	utr3	ENSMUSG00000031691	ProperStrand	92	chr15	34370545	34370618	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-2.7794
chr3	108228259	108228275	protein_coding	Sars	utr3	ENSMUSG00000068739	NonProperStrand	200	chr7	117189931	117189977	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-1.3487
chr7	57041565	57041581	protein_coding	Prmt3	exon	ENSMUSG00000030505	ProperStrand	89	chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-5.6786
chr14	32979488	32979510	protein_coding	Ncoa4	intron	ENSMUSG00000056234	ProperStrand	15	chr3	123210854	123210946	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-4.5915
chr14	64111427	64111541	protein_coding	Tdh	utr3	ENSMUSG00000021953	ProperStrand	67	chr15	34370545	34370579	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-3.3467
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr1	71649047	71665969	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	11	-20.3262
chr9	88280656	88282100	protein_coding	Snx14	exon	ENSMUSG00000032422	ProperStrand	13	chr13	46765144	46765160	protein_coding	C78339	exon	ENSMUSG00000069237	NonProperStrand	104	1	-15.3595
chr10	127826867	127826883	protein_coding	Ankrd52	exon	ENSMUSG00000014498	NonProperStrand	3	chr7	116664858	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-8.6415
chr15	100799143	100799223	protein_coding	Scn8a	intron	ENSMUSG00000023033	ProperStrand	14	chrX	135868784	135868874	protein_coding	Trap1a	exon	ENSMUSG00000051257	ProperStrand	66	1	-16.0997
chr11	74495756	74495773	protein_coding	Pafah1b1	exon	ENSMUSG00000020745	NonProperStrand	2	chr8	32260335	32260424	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	NonProperStrand	14	1	-inf
chr12	88034478	88034530	protein_coding	Vash1	intron	ENSMUSG00000021256	ProperStrand	12	chr7	117189957	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	5	-inf
chr10	80640851	80642181	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr17	13112449	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	14	-7.1435
chr2	131818858	131818948	protein_coding	Rassf2	utr3	ENSMUSG00000027339	ProperStrand	5	chr12	17552996	17553076	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	2	-16.3589
chr9	61768184	61768242	protein_coding	Kif23	intron	ENSMUSG00000032254	ProperStrand	41	chr2	32818836	32818926	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-6.2201
chr13	9833551	9833679	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr1	162967489	162967566	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	22	-1.7563
chr14	55476645	55476661	protein_coding	Homez	exon	ENSMUSG00000057156	NonProperStrand	127	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-5.7236
chr11	119136228	119136244	protein_coding	Gaa	exon	ENSMUSG00000025579	NonProperStrand	201	chr9	120038466	120038543	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.1208
chr18	38491895	38491999	protein_coding	Gnpda1	intron	ENSMUSG00000052102	ProperStrand	16	chr19	8798521	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	3	-17.6716
chr11	120152967	120153018	protein_coding	Bahcc1	utr3	ENSMUSG00000039741	ProperStrand	118	chr3	38898057	38898073	protein_coding	Fat4	exon	ENSMUSG00000046743	ProperStrand	3	1	-18.9990
chr7	52096726	52096742	protein_coding	Tbc1d17	exon	ENSMUSG00000038520	ProperStrand	20	chr5	130300461	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.5361
chr5	115692493	115692555	protein_coding	Rnf10	exon	ENSMUSG00000041740	ProperStrand	95	chr4	131865916	131865979	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	5	-6.6983
chr9	120038497	120038673	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	chr16	56035867	56035963	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	13	-12.3628
chr2	61649788	61649806	protein_coding	Tbr1	exon	ENSMUSG00000035033	ProperStrand	9	chr1	162965999	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-7.3553
chr11	95840936	95840967	protein_coding	Igf2bp1	exon	ENSMUSG00000013415	ProperStrand	140	chr13	105422034	105422134	protein_coding	Cwc27	intron	ENSMUSG00000021715	ProperStrand	14	4	-inf
chr13	74595056	74595136	LTR	RMER10A	ERVL	chr13RMER10A74594966	NonProperStrand	1	chr13	74595260	74595350	LTR	RMER10B	ERVL	chr13RMER10B74595165	ProperStrand	1	1	-inf
chr16	8329150	8329171	LINE	L2a	L2	chr16L2a8329096	NonProperStrand	1	chr18	75162897	75162921	protein_coding	Rpl17	utr3	ENSMUSG00000062328	ProperStrand	90	1	-inf
chr15	57978221	57978298	snoRNA	ENSMUSG00000080461_SNORA11	.	ENSMUSG00000080461	ProperStrand	171	chr11	116938652	116938752	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	3	-9.9869
chr18	10726355	10726434	protein_coding	Mib1	exon	ENSMUSG00000024294	ProperStrand	27	chr16	23109051	23109093	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-8.8859
chr18	61748562	61748614	protein_coding	Csnk1a1	utr3	ENSMUSG00000024576	ProperStrand	64	chr3	123210854	123210882	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.9622
chr2	127072359	127072401	protein_coding	Ciao1	exon	ENSMUSG00000003662	ProperStrand	2	chr15	79908939	79909019	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-12.8905
chr6	124691242	124691303	protein_coding	Grcc10	utr5	ENSMUSG00000072772	ProperStrand	88	chr3	123210855	123210955	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	8	-14.8595
chr14	19543670	19543688	protein_coding	Ube2e2	intron	ENSMUSG00000058317	ProperStrand	5	chr11	6428098	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-8.1751
chr10	75855150	75855167	protein_coding	Pcnt	exon	ENSMUSG00000001151	ProperStrand	127	chr3	88497852	88497980	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-5.9770
chr12	31943847	31943937	snoRNA	ENSMUSG00000065200_SNORA65	.	ENSMUSG00000065200	ProperStrand	19	chr15	79908936	79908954	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-7.7665
chr3	78902271	78903076	protein_coding	Rapgef2	exon	ENSMUSG00000062232	ProperStrand	14	chr9	120037899	120037979	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-7.6016
chrX	132673816	132673833	protein_coding	Bex4	intron	ENSMUSG00000047844	NonProperStrand	70	chr19	8963050	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-3.6545
chr7	52309977	52309993	protein_coding	Prrg2	exon	ENSMUSG00000007837	NonProperStrand	281	chr1	102076759	102076790	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	1	-6.3654
chr4	128867196	128867212	protein_coding	Yars	exon	ENSMUSG00000028811	ProperStrand	131	chr11	62416600	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-3.6823
chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	chr7	116663634	116663724	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-1.3043
chr4	123027315	123170374	protein_coding	Macf1	exon	ENSMUSG00000028649	ProperStrand	320	chr16	23111779	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	11	-7.9089
chr12	108979157	108979174	LINE	Lx8	L1	chr12Lx8108979135	ProperStrand	1	mmu-miR-1291	0	26	miRNA	mmu-miR-1291	.	mmu-miR-1291	ProperStrand	103	1	-inf
chr2	164311966	164311983	protein_coding	Dbndd2	utr5	ENSMUSG00000017734	ProperStrand	53	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-10.6780
chr12	68762706	68762786	LINE	L1_Mus2	L1	chr12L1_Mus268762115	NonProperStrand	3	chr4	80378079	80378169	LINE	L1Md_F2	L1	chr4L1Md_F280376923	NonProperStrand	1	1	-inf
chr10	5342833	5342849	protein_coding	Esr1	utr3	ENSMUSG00000019768	ProperStrand	18	chr10	23505152	23505252	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.2069
chr1	181685597	181685697	protein_coding	Ahctf1	exon	ENSMUSG00000026491	ProperStrand	39	chr17	35087895	35087946	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-6.0455
chr17	45705906	45705960	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr7	150717298	150717345	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	3	-1.3831
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	83318070	83318086	protein_coding	Tet3	exon	ENSMUSG00000034832	NonProperStrand	93	3	-8.9806
chr4	131908357	131908462	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr7	24713726	24713742	protein_coding	Vmn1r179	exon	ENSMUSG00000046924	NonProperStrand	69	1	-6.9815
chr9	40611238	40611317	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr9	15118332	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	3	-0.6978
chr4	134880777	134880867	protein_coding	Srrm1	exon	ENSMUSG00000028809	ProperStrand	142	chr4	56910497	56910577	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-4.4362
chr4	55540955	55541014	protein_coding	Klf4	utr3	ENSMUSG00000003032	ProperStrand	64	chr1	162965986	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-3.4843
chr16	20371920	20372010	protein_coding	Abcc5	intron	ENSMUSG00000022822	ProperStrand	30	chr11	6428087	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-7.4996
chr7	132813991	132814091	protein_coding	Gtf3c1	exon	ENSMUSG00000032777	ProperStrand	161	chr13	51743632	51743703	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-4.9276
chr4	107702650	107702740	protein_coding	Podn	utr5	ENSMUSG00000028600	ProperStrand	2	chr10	110918553	110918633	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-10.7503
chr11	106684003	106684019	protein_coding	Smurf2	exon	ENSMUSG00000018363	ProperStrand	79	chr3	123210905	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.6347
chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-3.0754
chr19	46747409	46747426	protein_coding	Cyp17a1	utr5	ENSMUSG00000003555	NonProperStrand	2	chr15	79913295	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-10.9071
chr16	31094751	31094844	protein_coding	Acap2	utr3	ENSMUSG00000049076	ProperStrand	17	chr19	8963027	8963043	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-7.6887
chr11	100375618	100375635	protein_coding	Acly	exon	ENSMUSG00000020917	ProperStrand	183	chr11	97642952	97642987	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-0.8354
chr12	14205757	14205837	LTR	MER70B	ERVL	chr12MER70B14205670	ProperStrand	1	chr12	14214184	14214274	SINE	MIR3	MIR	chr12MIR314214139	NonProperStrand	1	1	-inf
chr19	9045133	9045186	protein_coding-noncoding	Eef1g	utr5	ENSMUSG00000071644	ProperStrand	7	chr19	8798775	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-9.1562
chr7	74903934	74904024	protein_coding	Synm	exon	ENSMUSG00000030554	ProperStrand	15	chr18	33954819	33954899	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-6.1972
chr11	5866956	5867067	protein_coding	Ykt6	utr3	ENSMUSG00000002741	ProperStrand	46	chr11	76758399	76758416	protein_coding	Blmh	intron	ENSMUSG00000020840	ProperStrand	70	1	-13.5419
chrX	105504079	105504096	LTR	MERVL-int	ERVL	chrXMERVL-int105503972	ProperStrand	7	chr7	35030790	35030815	protein_coding	4931406P16Rik	exon	ENSMUSG00000066571	ProperStrand	75	1	-17.3159
chr4	132530098	132530117	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	5	-inf
chr15	79908929	79909019	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	chr8	32260335	32260438	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	9	-1.4396
chr5	42136455	42136473	Low_complexity	GA-rich	Low_complexity	chr5GA-rich42136449	NonProperStrand	106	chr7	105310561	105310577	protein_coding	Capn5	exon	ENSMUSG00000035547	ProperStrand	99	1	-11.1639
chr2	114019996	114020117	protein_coding	Zfp770	utr3	ENSMUSG00000040321	ProperStrand	18	chr1	162965558	162965591	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	14	-19.8271
chr5	144663896	144663917	protein_coding	Aimp2	exon	ENSMUSG00000029610	ProperStrand	10	chr7	116664829	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-5.9693
chr17	24774357	24774394	protein_coding	Nthl1	intron	ENSMUSG00000041429	ProperStrand	4	chr16	23111401	23111491	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-6.3168
chr3	107819517	107820302	protein_coding	Gstm1	exon	ENSMUSG00000058135	ProperStrand	27	chr17	24857805	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.7240
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr11	74718930	74718975	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	1	-3.8076
chr15	86328100	86328190	protein_coding	Tbc1d22a	utr3	ENSMUSG00000051864	ProperStrand	15	chr4	131865856	131865936	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.2332
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr7	74197155	74197171	protein_coding	Adamts17	intron	ENSMUSG00000058145	ProperStrand	44	1	-9.5502
chr8	125626583	125626602	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	chr17	13112532	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-2.1505
chr10	12642430	12642450	lincRNA	B230208H11Rik	exon	ENSMUSG00000085233	ProperStrand	21	chr17	35293531	35293579	protein_coding	Prrc2a	exon	ENSMUSG00000024393	ProperStrand	315	2	-18.7575
chr4	151851217	151851234	protein_coding	Nphp4	intron	ENSMUSG00000039577	ProperStrand	33	chr4	131908821	131908868	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.1302
chr14	9085973	9085990	protein_coding	Acox2	exon	ENSMUSG00000021751	ProperStrand	3	chr16	23110827	23110851	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr16	17038523	17043801	protein_coding	Mapk1	utr3	ENSMUSG00000063358	ProperStrand	67	chr7	116664819	116664872	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-4.1912
chr4	43505656	43505681	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr17	37143097	37146448	protein_coding	Zfp57	exon	ENSMUSG00000036036	ProperStrand	39	1	-3.8628
chr3	88390790	88390863	protein_coding	Ssr2	exon	ENSMUSG00000041355	ProperStrand	22	chr2	130101969	130102059	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-7.3504
chr1	74734841	74734857	protein_coding	Ttll4	exon	ENSMUSG00000033257	ProperStrand	24	chr19	8963113	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.9221
chr2	98174031	98174048	LTR	IAPLTR3-int	ERVK	chr2IAPLTR3-int98170118	ProperStrand	37	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-6.8254
chrX	70602559	70602583	protein_coding	Zfp275	utr3	ENSMUSG00000031365	ProperStrand	9	chr12	55797768	55797858	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	1	-11.5751
chr7	48806197	48806222	protein_coding	Gm6871	intron	ENSMUSG00000090744	ProperStrand	1	chr9	15118325	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-inf
chr11	60591076	60591166	protein_coding	Smcr8	utr5	ENSMUSG00000049323	ProperStrand	46	chr2	26494716	26494796	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.5925
chr15	36529008	36529057	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr17	28301702	28301724	protein_coding	Scube3	exon	ENSMUSG00000038677	ProperStrand	13	1	-10.9903
chr8	89158729	89158794	protein_coding	Lonp2	exon	ENSMUSG00000047866	ProperStrand	13	chr11	77995215	77995239	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-9.2703
chr9	57385425	57385441	protein_coding	2310046O06Rik	utr5	ENSMUSG00000032305	ProperStrand	135	chr18	73693111	73693134	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-3.9692
chr7	31426472	31429568	protein_coding	Rbm42	exon	ENSMUSG00000036733	ProperStrand	9	chr1	59749377	59749428	snoRNA	ENSMUSG00000077358_SNORD70	.	ENSMUSG00000077358	ProperStrand	63	1	-17.0711
chr11	97641495	97641575	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	chr11	6520322	6520412	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	2	-4.4316
chr4	136098858	136098917	protein_coding	Luzp1	exon	ENSMUSG00000001089	ProperStrand	35	chr9	120039587	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-4.3274
chr17	35386328	35386384	protein_coding-noncoding	Ddx39b	utr5	ENSMUSG00000019432	ProperStrand	7	chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	1	-13.9092
chr13	57368611	57368701	LTR	ORR1A0	MaLR	chr13ORR1A057368360	ProperStrand	1	chr10	75540819	75540899	protein_coding	Slc5a4b	intron	ENSMUSG00000020226	NonProperStrand	7	1	-inf
chr7	133930800	133930980	protein_coding	Ppp4c	exon	ENSMUSG00000030697	ProperStrand	12	chr3	123210880	123210960	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.0354
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr16	8756938	8757028	protein_coding	Usp7	exon	ENSMUSG00000022710	ProperStrand	118	1	-3.2036
chr17	45727026	45727247	protein_coding	Slc29a1	exon	ENSMUSG00000023942	ProperStrand	95	chr5	121655017	121655097	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	13	-inf
chr5	67746862	67746953	protein_coding	Slc30a9	utr3	ENSMUSG00000029221	ProperStrand	14	chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-9.3927
chr1	173939793	173939827	protein_coding	Vangl2	exon	ENSMUSG00000026556	ProperStrand	37	chr18	35716785	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.0044
chr2	92253901	92254001	protein_coding	Cry2	exon	ENSMUSG00000068742	ProperStrand	10	chr16	23110909	23110945	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.7978
chr7	88489749	88489791	protein_coding	Rps17	exon	ENSMUSG00000061787	ProperStrand	105	chr7	117189961	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.3492
chr13	9833562	9833651	LINE	L1Md_T	L1	chr13L1Md_T9831266	NonProperStrand	15	chr19	8798482	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	NonProperStrand	4	1	-26.3461
chr10	127525581	127526037	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr5	114268764	114268781	protein_coding	Selplg	utr3	ENSMUSG00000048163	ProperStrand	1	1	-inf
chr11	94504724	94504824	protein_coding	Lrrc59	exon	ENSMUSG00000020869	ProperStrand	115	chr1	162966852	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-4.9882
chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr2	153050783	153050799	protein_coding	Tspyl3	exon	ENSMUSG00000074671	ProperStrand	228	1	-1.3646
chr11	115649673	115649690	protein_coding	2310067B10Rik	exon	ENSMUSG00000020747	NonProperStrand	8	chr4	130225060	130225137	protein_coding	Pum1	exon	ENSMUSG00000028580	ProperStrand	131	1	-15.8679
chr9	72944631	72944667	protein_coding	Rab27a	utr3	ENSMUSG00000032202	ProperStrand	12	chr16	23110905	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.4686
chr1	166368209	166368276	protein_coding	Atp1b1	utr3	ENSMUSG00000026576	ProperStrand	67	chr10	80860700	80860717	protein_coding	Nfic	utr3	ENSMUSG00000055053	ProperStrand	69	2	-19.3569
chr2	26493409	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr6	127912635	127912651	protein_coding	Tspan9	utr3	ENSMUSG00000030352	NonProperStrand	7	2	-16.9558
chr6	46316493	46316513	protein_coding	Cntnap2	intron	ENSMUSG00000039419	NonProperStrand	283	chr2	158182206	158182243	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-2.1795
chr1	191480820	191480922	protein_coding	Cenpf	exon	ENSMUSG00000026605	ProperStrand	44	chr2	119867968	119867984	protein_coding	Pla2g4b	utr3	ENSMUSG00000033852	ProperStrand	4	1	-inf
chr9	98483136	98488005	protein_coding	Copb2	exon	ENSMUSG00000032458	ProperStrand	33	chr9	120038583	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	3	-10.1073
chr3	108228259	108228275	protein_coding	Sars	utr3	ENSMUSG00000068739	NonProperStrand	200	chr5	108334194	108334236	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-2.6033
chr5	74489543	74489563	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr1	176764802	176764818	protein_coding	Grem2	utr3	ENSMUSG00000050069	ProperStrand	24	1	-7.4450
chr6	51416649	51416939	protein_coding	Hnrnpa2b1	exon	ENSMUSG00000004980	ProperStrand	166	chr12	110874223	110874287	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	1	-7.9431
chr2	90235307	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	74415168	74415184	protein_coding	Gm216	exon	ENSMUSG00000073650	ProperStrand	33	2	-9.2133
chr2	71252419	71252451	protein_coding	Hat1	intron	ENSMUSG00000027018	ProperStrand	53	chr4	131908356	131908412	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-2.9858
chr11	98857013	98864917	protein_coding	Top2a	exon	ENSMUSG00000020914	ProperStrand	324	chr11	62418045	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	2	-4.2867
chr17	32335423	32335495	protein_coding	Brd4	exon	ENSMUSG00000024002	ProperStrand	121	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.2799
chr12	77390673	77390757	protein_coding	Mthfd1	exon	ENSMUSG00000021048	ProperStrand	71	chr17	35299551	35299641	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-4.4545
chrX	34622667	34622742	protein_coding	Rpl39	utr3	ENSMUSG00000079641	ProperStrand	37	chr18	35716791	35716881	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.0044
chr17	4082851	4082902	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr18	33954845	33954935	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-0.8686
chr17	35972523	35972600	protein_coding	Tubb5	exon	ENSMUSG00000001525	ProperStrand	624	chr11	62418048	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-1.4046
chr12	31984687	31984787	protein_coding	Lamb1	intron	ENSMUSG00000002900	ProperStrand	87	chr2	130103434	130103502	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-7.3226
chr13	59806181	59806262	protein_coding	Fam75d3	intron	ENSMUSG00000050876	ProperStrand	46	chr11	68886970	68887037	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	4	-14.7344
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr4	116828394	116828428	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-4.0161
chr10	79702695	79703166	protein_coding	Mum1	exon	ENSMUSG00000020156	ProperStrand	19	chr3	108357268	108357358	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	8	-21.3834
chr15	58705447	58705464	protein_coding	Trmt12	exon	ENSMUSG00000037085	ProperStrand	7	chr16	23110889	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.4785
chr18	10052130	10052153	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr16	57391749	57391793	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	1	-3.4324
chr13	24893632	24893657	protein_coding	BC005537	utr5	ENSMUSG00000019132	ProperStrand	11	chr16	23111779	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.0138
chr7	52713924	52715209	protein_coding	Ftl1	utr5	ENSMUSG00000050708	ProperStrand	807	chr14	76247732	76247837	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-0.7676
chr16	22252755	22252780	protein_coding	Tra2b	exon	ENSMUSG00000022858	ProperStrand	32	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	1	-8.2863
chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	chr7	134343822	134343855	protein_coding	Tbc1d10b	exon	ENSMUSG00000042492	ProperStrand	187	1	-8.0031
chr5	135058745	135062772	protein_coding	Rfc2	exon	ENSMUSG00000023104	ProperStrand	8	chr1	162965539	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-7.2483
chr11	116535919	116535982	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr3	32261952	32262002	protein_coding	Zmat3	intron	ENSMUSG00000027663	ProperStrand	62	1	-5.8462
chr8	126532129	126533622	protein_coding	Taf5l	exon	ENSMUSG00000038697	ProperStrand	23	chr1	162967506	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	3	-12.5372
chr13	9833563	9833615	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr16	38158095	38158185	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	1	-1.0027
chr6	129533250	129534178	protein_coding	Klre1	exon	ENSMUSG00000050241	NonProperStrand	20	chr19	8963024	8963128	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.2716
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr13	59828136	59828152	protein_coding	4932411G14Rik	exon	ENSMUSG00000043986	NonProperStrand	1	1	-inf
chr5	3636946	3636965	protein_coding	Pex1	utr3	ENSMUSG00000005907	ProperStrand	11	chr7	117166745	117166859	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-8.2149
chr4	141175326	141175354	protein_coding	Slc25a34	utr3	ENSMUSG00000040740	ProperStrand	15	chr3	123210854	123210935	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	4	-14.9745
chr10	127522552	127522603	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr4	143027927	143028559	protein_coding	Oog4	exon	ENSMUSG00000047799	NonProperStrand	99	1	-7.6663
chr2	26493437	26493518	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr9	120039588	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	13	-1.6873
chr8	106976637	106976653	protein_coding	Ccdc79	exon	ENSMUSG00000052616	NonProperStrand	57	chr11	6428108	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.2853
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	1	-6.8685
chr15	84891141	84891221	protein_coding	Fam118a	intron	ENSMUSG00000022434	NonProperStrand	4	chr15	84892990	84893080	protein_coding	Fam118a	utr3	ENSMUSG00000022434	ProperStrand	44	1	-20.7530
chr1	182603104	182603122	protein_coding	Lin9	intron	ENSMUSG00000058729	ProperStrand	7	chr11	6428088	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-7.4403
chr4	131479634	131479725	protein_coding	Epb4.1	utr3	ENSMUSG00000028906	ProperStrand	23	chr4	131908355	131908410	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-7.7744
chr9	40611426	40611526	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr4	106631768	106631786	protein_coding	Ssbp3	intron	ENSMUSG00000061887	ProperStrand	36	1	-9.1655
chr4	25182038	25183191	protein_coding	1810074P20Rik	exon	ENSMUSG00000040359	ProperStrand	10	chr3	98120343	98120423	protein_coding	Phgdh	exon	ENSMUSG00000053398	ProperStrand	46	1	-17.6155
chr8	113447147	113447167	protein_coding	St3gal2	intron	ENSMUSG00000031749	ProperStrand	206	chr5	36052297	36053593	protein_coding	Sh3tc1	exon	ENSMUSG00000036553	ProperStrand	16	1	-13.5289
chr4	143027927	143028559	protein_coding	Oog4	exon	ENSMUSG00000047799	NonProperStrand	99	chr4	131866607	131866649	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	1	-8.1033
chr2	146125208	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	chr4	116826699	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	2	-7.6174
chr11	60590425	60590441	protein_coding	Top3a	exon	ENSMUSG00000002814	ProperStrand	28	chr18	73693171	73693187	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-7.0351
chr3	104460980	104461003	protein_coding	Slc16a1	utr3	ENSMUSG00000032902	ProperStrand	48	chr7	122966867	122966884	protein_coding	Sox6	intron	ENSMUSG00000051910	ProperStrand	18	1	-16.1812
chr14	32479927	32479943	protein_coding	Btd	exon	ENSMUSG00000021900	NonProperStrand	74	chr4	47493033	47495863	protein_coding	Sec61b	exon	ENSMUSG00000053317	ProperStrand	3	1	-inf
chr9	108017616	108017633	protein_coding	Bsn	exon	ENSMUSG00000032589	ProperStrand	14	chr13	70744856	70744895	protein_coding	BC018507	exon	ENSMUSG00000034525	ProperStrand	43	1	-17.0952
chr8	13837567	13837583	protein_coding	AF366264	exon	ENSMUSG00000057116	ProperStrand	7	chr5	93612008	93612055	protein_coding	Ccni	exon	ENSMUSG00000063015	ProperStrand	43	1	-18.6393
chr13	44969661	45001659	protein_coding	Jarid2	exon	ENSMUSG00000038518	ProperStrand	372	chr9	15119683	15119773	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	8	-6.2331
chr11	55109936	55109958	protein_coding	Fat2	intron	ENSMUSG00000055333	ProperStrand	39	chr15	79913292	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.4040
chr4	134483078	134483116	protein_coding	D4Wsu53e	utr3	ENSMUSG00000037266	ProperStrand	15	chr16	23110549	23110581	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.0488
chr3	89009743	89009759	protein_coding	Gba	exon	ENSMUSG00000028048	NonProperStrand	88	chr18	35334840	35339360	protein_coding	Ctnna1	exon	ENSMUSG00000037815	ProperStrand	115	1	-11.2368
chr4	18020485	18020501	protein_coding	Mmp16	exon	ENSMUSG00000028226	ProperStrand	55	chr15	79908956	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-5.6429
chr9	15119358	15119425	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	chr10	107800824	107800849	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	1	-0.7548
chr13	114113333	114113350	protein_coding	BC067074	exon	ENSMUSG00000021763	NonProperStrand	62	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.2167
chr4	131888479	131888516	protein_coding	Rcc1	utr3	ENSMUSG00000028896	ProperStrand	55	chr2	26494708	26494759	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	4	-11.1008
chr5	41222916	41222932	LINE	Lx3_Mus	L1	chr5Lx3_Mus41222639	ProperStrand	1	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-inf
chr14	33006635	33007101	protein_coding	Timm23	exon	ENSMUSG00000013701	ProperStrand	24	chr17	35088957	35089025	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-7.6951
chr4	46508045	46508135	snoRNA	ENSMUSG00000064410_SNORA36	.	ENSMUSG00000064410	ProperStrand	133	chr7	29136551	29136631	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.1523
chr10	104675548	104675575	protein_coding	Tmtc2	intron	ENSMUSG00000036019	ProperStrand	72	chr11	68886963	68887033	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	NonProperStrand	12	1	-16.2082
chr19	41986581	41990127	protein_coding	Pgam1	exon	ENSMUSG00000011752	ProperStrand	124	chr15	34370545	34370577	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-2.2695
chr3	134151041	134151057	lincRNA	Gm16742	intron	ENSMUSG00000084777	NonProperStrand	42	chr16	23111372	23111446	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.7838
chr5	60949160	60949250	LINE	L1_Mm	L1	chr5L1_Mm60948502	ProperStrand	2	chr7	54443536	54443616	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-17.2112
chr17	34174658	34174758	protein_coding	Rxrb	utr3	ENSMUSG00000039656	ProperStrand	34	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	10	-16.4434
chr13	114794041	114794083	protein_coding	Arl15	intron	ENSMUSG00000042348	ProperStrand	51	chr18	35716687	35716777	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.4421
chr9	40610628	40610698	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr8	77582776	77582801	protein_coding	Tom1	exon	ENSMUSG00000042870	ProperStrand	30	2	-15.1174
chr2	26494709	26494842	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	chr13	90238584	90238674	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	10	-7.0297
chr8	72436903	72436993	protein_coding	Gatad2a	exon	ENSMUSG00000036180	ProperStrand	112	chr8	129468788	129468868	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-3.2514
chr2	24814676	24814719	protein_coding	Zmynd19	utr3	ENSMUSG00000026974	ProperStrand	18	chr19	8800360	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-9.6041
chr15	73058709	73058766	protein_coding	Ptk2	intron	ENSMUSG00000022607	ProperStrand	31	chr5	74489572	74489662	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-5.0408
chr13	96106754	96106771	protein_coding	Zbed3	utr3	ENSMUSG00000041995	NonProperStrand	2	chr7	118219704	118219740	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-11.5289
chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	chr1	162966812	162966860	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-2.9651
chr10	9571846	9571910	snoRNA	ENSMUSG00000064609_SNORA36	.	ENSMUSG00000064609	ProperStrand	35	chr19	8800363	8800463	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-4.5474
chr9	68496931	68496948	LINE	Lx8	L1	chr9Lx868496758	ProperStrand	6	chr4	116827119	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-11.7847
chr7	88746278	88746296	protein_coding	Homer2	utr3	ENSMUSG00000025813	NonProperStrand	6	chr5	30111625	30111745	protein_coding	Dnajb6	utr3	ENSMUSG00000029131	ProperStrand	81	1	-17.4391
chr10	107800719	107800795	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	chr5	111121104	111121194	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-1.6514
chr2	160546765	160547230	protein_coding	Top1	exon	ENSMUSG00000070544	ProperStrand	14	chr7	148634704	148634784	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-6.8488
chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr5	135529894	135529984	snoRNA	ENSMUSG00000088008_SCARNA20	.	ENSMUSG00000088008	ProperStrand	139	1	-6.0760
chr11	97372833	97372850	protein_coding	Srcin1	utr3	ENSMUSG00000038453	NonProperStrand	21	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	2	-11.7452
chr11	72029123	72029142	lincRNA	4930563E22Rik	exon	ENSMUSG00000053574	NonProperStrand	3	chr1	191504152	191504192	protein_coding	Cenpf	exon	ENSMUSG00000026605	ProperStrand	44	1	-20.4989
chr6	17616267	17616287	protein_coding	Capza2	utr3	ENSMUSG00000015733	ProperStrand	23	chr11	68936358	68936374	protein_coding	Hes7	exon	ENSMUSG00000023781	NonProperStrand	66	1	-15.0523
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr5	89663839	89663855	protein_coding	Slc4a4	exon	ENSMUSG00000060961	NonProperStrand	195	1	-7.0202
chrX	6951555	6951571	protein_coding	Usp27x	exon	ENSMUSG00000046269	NonProperStrand	36	chr11	106362557	106362635	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	2	-13.4323
chr8	112199316	112200749	protein_coding	2400003C14Rik	exon	ENSMUSG00000031729	ProperStrand	30	chr16	23111387	23111447	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.3326
chr9	15119292	15119382	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	chr16	43886794	43886850	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	10	-13.9676
chr3	95059062	95059092	protein_coding	Prune	exon	ENSMUSG00000015711	ProperStrand	21	chr16	5100103	5100119	protein_coding	Ppl	exon	ENSMUSG00000039457	ProperStrand	37	1	-16.3783
chr19	46153633	46153748	protein_coding	Nolc1	exon	ENSMUSG00000015176	ProperStrand	53	chr1	162967503	162967536	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	8	-19.8265
chr11	97451022	97451112	SINE	B1_Mus1	Alu	chr11B1_Mus197451025	ProperStrand	1	chr14	39905530	39905620	protein_coding	Nrg3	intron	ENSMUSG00000041014	NonProperStrand	9	1	-inf
chr1	71645792	71645866	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr6	71791341	71791387	protein_coding	Immt	intron	ENSMUSG00000052337	ProperStrand	48	6	-19.1932
chr8	97991980	97991996	protein_coding	Csnk2a2	intron	ENSMUSG00000046707	ProperStrand	21	chr2	166890780	166890858	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	1	-12.5091
chr17	6232006	6232022	protein_coding	Tulp4	exon	ENSMUSG00000034377	NonProperStrand	265	chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	1	-7.6511
chr9	81949791	81949813	protein_coding	Mei4	intron	ENSMUSG00000043289	NonProperStrand	42	chr10	110918549	110918663	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-6.9121
chr8	13416897	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr5	39062111	39062199	protein_coding	Zfp518b	utr3	ENSMUSG00000046572	ProperStrand	95	2	-9.0727
chr3	38353967	38354067	protein_coding	Ankrd50	exon	ENSMUSG00000044864	ProperStrand	36	chr11	69483135	69483188	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.3562
chr9	70261045	70266627	protein_coding	Ccnb2	exon	ENSMUSG00000032218	ProperStrand	54	chr1	162967160	162967178	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	6	-20.5757
chr13	30633201	30636983	protein_coding	Uqcrfs1	exon	ENSMUSG00000038462	ProperStrand	24	chr4	131865377	131865457	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-5.7790
chr10	80542224	80542273	protein_coding	Thop1	exon	ENSMUSG00000004929	ProperStrand	20	chr12	106269418	106269479	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-6.2878
chr2	181384219	181384253	protein_coding	Prpf6	exon	ENSMUSG00000002455	ProperStrand	54	chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	1	-9.0020
chr1	102076756	102076790	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	chr4	132394350	132394450	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	1	-5.3090
chr6	72178971	72178988	protein_coding	Atoh8	intron	ENSMUSG00000037621	NonProperStrand	61	chr5	121655126	121655154	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.7168
chr4	137098676	137098726	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	1	-4.0816
chr10	72437415	72437431	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr18	75161108	75161172	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	2	-6.8968
chr8	96496930	96524260	protein_coding	Amfr	utr3	ENSMUSG00000031751	ProperStrand	26	chr16	23110961	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-5.5923
chr15	36528066	36538176	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr15	34370545	34370669	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	4	-1.0017
chr2	29001741	29012512	protein_coding	Setx	exon	ENSMUSG00000043535	ProperStrand	187	chr10	23505152	23505269	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	9	-6.1373
chr11	16978538	16978554	protein_coding	Cnrip1	exon	ENSMUSG00000044629	ProperStrand	1	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-inf
chr18	62664462	62664515	protein_coding	Fbxo38	exon	ENSMUSG00000042211	ProperStrand	18	chr18	35714253	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-9.4636
chr2	29769096	29769123	protein_coding	Odf2	intron	ENSMUSG00000026790	ProperStrand	58	chr5	108336368	108336490	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-8.1670
chr11	58795625	58795642	protein_coding	Trim11	exon	ENSMUSG00000020455	ProperStrand	43	chr1	88252876	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-7.3033
chr7	99889808	99889824	lincRNA	4632427E13Rik	exon	ENSMUSG00000074024	ProperStrand	5	chr18	35716734	35716817	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-16.9630
chr9	15118245	15118321	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	chr13	75905593	75905651	snoRNA	ENSMUSG00000077449_SNORA42	.	ENSMUSG00000077449	ProperStrand	26	1	-5.0591
chr15	31523972	31524107	protein_coding	Cct5	exon	ENSMUSG00000022234	ProperStrand	116	chr12	110874223	110874290	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	1	-8.6571
chr7	138459653	138459669	protein_coding	Cuzd1	exon	ENSMUSG00000040205	NonProperStrand	59	chr11	95625357	95625393	protein_coding	Zfp652	utr3	ENSMUSG00000075595	ProperStrand	48	1	-13.7941
chr10	13234763	13234810	protein_coding	Fuca2	utr3	ENSMUSG00000019810	ProperStrand	4	chr9	15119722	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-8.0470
chr15	31522528	31522643	protein_coding	Cct5	exon	ENSMUSG00000022234	ProperStrand	116	chr7	52262539	52262639	protein_coding	Scaf1	exon	ENSMUSG00000038406	ProperStrand	81	1	-11.3862
chr18	71487780	71487796	protein_coding	Dcc	intron	ENSMUSG00000060534	NonProperStrand	29	chr19	8798740	8798766	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-6.2273
chr13	114113333	114113350	protein_coding	BC067074	exon	ENSMUSG00000021763	NonProperStrand	62	chr16	23111384	23111433	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.2142
chr6	149283953	149283969	protein_coding	2810474O19Rik	utr3	ENSMUSG00000032712	ProperStrand	70	chr8	32260335	32260440	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	2	-7.2342
chr10	70727539	70727598	protein_coding	Ube2d1	intron	ENSMUSG00000019927	ProperStrand	9	chr7	29136552	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-9.8851
chr16	19883898	19884021	protein_coding	A930003A15Rik	exon	ENSMUSG00000075330	ProperStrand	93	chr4	131908272	131908319	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.8464
chr15	100358955	100358972	protein_coding	Tfcp2	exon	ENSMUSG00000009733	NonProperStrand	77	chr8	82198582	82198643	protein_coding	Otud4	utr3	ENSMUSG00000036990	ProperStrand	45	1	-13.3930
chr6	143007902	143007920	protein_coding	5730419I09Rik	intron	ENSMUSG00000030279	ProperStrand	81	chr5	115939512	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-7.2673
chr14	33060966	33061002	protein_coding	Parg	intron	ENSMUSG00000021911	ProperStrand	33	chr9	95384635	95384735	protein_coding	2610101N10Rik	exon	ENSMUSG00000032407	ProperStrand	56	1	-14.6502
chr11	45723144	45723160	protein_coding	Clint1	utr3	ENSMUSG00000006169	NonProperStrand	273	chr12	17553062	17553087	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-2.3135
chr1	155329875	155329965	protein_coding	Dhx9	exon	ENSMUSG00000042699	ProperStrand	98	chr7	29136524	29136597	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.5824
chr15	88695823	88695849	protein_coding	Pim3	utr3	ENSMUSG00000035828	ProperStrand	66	chr2	131005220	131005236	protein_coding	Cenpb	exon	ENSMUSG00000068267	NonProperStrand	38	1	-14.0391
chr1	58968491	58968515	protein_coding	Trak2	exon	ENSMUSG00000026028	ProperStrand	13	chr3	123210879	123210923	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-4.8751
chr11	97585733	97585826	protein_coding	Pip4k2b	exon	ENSMUSG00000018547	ProperStrand	46	chr2	26768400	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-6.1244
chr5	50370754	50370788	protein_coding	Gpr125	exon	ENSMUSG00000029090	ProperStrand	29	chrX	103207061	103207119	protein_coding	Magt1	exon	ENSMUSG00000031232	ProperStrand	12	1	-18.0424
chr16	4154926	4155016	protein_coding	Crebbp	exon	ENSMUSG00000022521	ProperStrand	56	chr11	55296275	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-6.3163
chr11	120672706	120672770	protein_coding	Fasn	exon	ENSMUSG00000025153	ProperStrand	298	chr17	24857722	24857812	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-0.6981
chr4	116875204	116875250	snRNA	ENSMUSG00000070228_U5	.	ENSMUSG00000070228	ProperStrand	131	chr4	131908236	131908297	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-1.0857
chr13	44964996	44965044	protein_coding	Jarid2	intron	ENSMUSG00000038518	ProperStrand	372	chr5	108334206	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	NonProperStrand	17	1	-12.2189
chr7	17019747	17019837	protein_coding	Zc3h4	exon	ENSMUSG00000059273	ProperStrand	95	chr14	76372304	76372394	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	1	-8.0716
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr14	31827477	31827544	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	2	-3.3423
chr7	28041899	28041948	lincRNA	Gm15567	intron	ENSMUSG00000084974	ProperStrand	13	chr7	28043044	28043136	protein_coding	Adck4	intron	ENSMUSG00000003762	NonProperStrand	18	10	-22.0725
chr8	24049894	24049945	protein_coding	Myst3	exon	ENSMUSG00000031540	ProperStrand	111	chr9	63868722	63868739	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	2	-11.7983
chr11	68610916	68610971	protein_coding	Myh10	exon	ENSMUSG00000020900	ProperStrand	91	chr3	88984670	88984770	protein_coding	Scamp3	exon	ENSMUSG00000028049	ProperStrand	32	15	-19.6228
chr1	72895615	72895705	protein_coding	Igfbp2	utr5	ENSMUSG00000039323	ProperStrand	406	chr4	86232407	86232487	snoRNA	ENSMUSG00000088958_Scarna8	.	ENSMUSG00000088958	ProperStrand	366	1	-5.8954
chrX	37453019	37453036	processed_transcript	Gm14643	.	ENSMUSG00000086157	ProperStrand	3	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-14.5266
chr19	8963032	8963048	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	chr4	116828388	116828452	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-5.2730
chr1	72301657	72301769	snRNA	ENSMUSG00000093333_AC120136.3	.	ENSMUSG00000093333	ProperStrand	68	chr11	97642952	97642995	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.2606
chr4	8499732	8505126	protein_coding	Rab2a	exon	ENSMUSG00000047187	ProperStrand	23	chr4	131908805	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-7.2528
chr2	4525268	4527018	protein_coding	Frmd4a	exon	ENSMUSG00000026657	ProperStrand	44	chr8	98269959	98270085	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	4	-18.6657
chr17	35154811	35154828	protein_coding	D17H6S56E-3	exon	ENSMUSG00000007030	NonProperStrand	1	chr10	62301768	62301839	protein_coding	Tet1	exon	ENSMUSG00000047146	ProperStrand	286	1	-inf
chr12	85350481	85350499	protein_coding	Acot1	utr5	ENSMUSG00000072949	ProperStrand	72	chr7	134671387	134671517	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-7.5081
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr15	34370540	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	23	-0.8183
chr9	103238429	103238488	protein_coding	Topbp1	exon	ENSMUSG00000032555	ProperStrand	81	chr11	101466256	101466350	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	1	-8.2711
chr2	160419122	160419140	protein_coding	Gm14221	intron	ENSMUSG00000078956	ProperStrand	1	chr7	116664811	116664901	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-inf
chr11	69402451	69402468	protein_coding-noncoding	Trp53	utr5	ENSMUSG00000059552	ProperStrand	1	chr6	145764118	145764134	protein_coding	Rassf8	exon	ENSMUSG00000030259	ProperStrand	23	1	-inf
chr3	121765548	121771895	protein_coding	Abca4	exon	ENSMUSG00000028125	ProperStrand	10	chr4	131865856	131865946	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	5	-21.6090
chr2	70521039	70522043	protein_coding	Gorasp2	exon	ENSMUSG00000014959	ProperStrand	21	chr13	95856366	95856384	protein_coding	Pde8b	intron	ENSMUSG00000021684	ProperStrand	43	1	-16.1440
chr13	99079871	99083075	protein_coding	Btf3	exon	ENSMUSG00000021660	ProperStrand	64	chr4	131908688	131908842	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-3.5594
chr19	8946074	8946759	protein_coding	Ubxn1	exon	ENSMUSG00000071655	ProperStrand	68	chr16	23111373	23111451	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-2.1407
chr9	108686749	108686768	protein_coding	Ip6k2	intron	ENSMUSG00000032599	ProperStrand	16	chr10	23505151	23505208	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.4264
chr1	60435392	60435436	protein_coding	Cyp20a1	intron	ENSMUSG00000049439	ProperStrand	7	chr4	108686156	108686196	protein_coding	Nrd1	exon	ENSMUSG00000053510	ProperStrand	76	1	-17.3540
chr11	82303736	82303752	LTR	MLT1A0	MaLR	chr11MLT1A082303705	NonProperStrand	1	chr8	126016554	126016814	protein_coding	Afg3l1	exon	ENSMUSG00000031967	ProperStrand	29	1	-inf
chr11	77994836	77994864	snoRNA	ENSMUSG00000064540_Snord42a	.	ENSMUSG00000064540	ProperStrand	142	chr7	116664819	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.2096
chr12	3968611	3968627	protein_coding	Efr3b	exon	ENSMUSG00000020658	ProperStrand	142	chr7	50207113	50207130	pseudogene	Gm9266	.	ENSMUSG00000080892	NonProperStrand	1	1	-inf
chr19	47090221	47096324	protein_coding	Ina	exon	ENSMUSG00000034336	ProperStrand	27	chr2	32818838	32818918	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-7.0539
chr5	112648589	112648606	lincRNA	Miat	exon	ENSMUSG00000086878	ProperStrand	2	chr5	125509096	125509112	protein_coding	Ncor2	exon	ENSMUSG00000029478	NonProperStrand	20	1	-22.5839
chr8	87578936	87579086	protein_coding	Tnpo2	exon	ENSMUSG00000031691	ProperStrand	92	chr12	110923177	110923231	snoRNA	ENSMUSG00000084487_SNORD113	.	ENSMUSG00000084487	ProperStrand	183	1	-10.2175
chr11	78088706	78090571	protein_coding	2610507B11Rik	exon	ENSMUSG00000010277	ProperStrand	246	chr10	17547610	17547626	protein_coding	Txlnb	exon	ENSMUSG00000039891	ProperStrand	70	1	-10.1745
chr10	61147839	61147898	protein_coding	Sar1a	exon	ENSMUSG00000020088	ProperStrand	15	chr13	51743569	51743659	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	4	-inf
chr11	68915308	68915518	protein_coding	Per1	exon	ENSMUSG00000020893	ProperStrand	46	chr2	130103452	130103501	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-8.5960
chr3	84873570	84873589	protein_coding	Arfip1	intron	ENSMUSG00000074513	ProperStrand	49	chr1	162966812	162966840	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-6.6600
chr7	144851872	144851962	LINE	L1Md_T	L1	chr7L1Md_T144851364	ProperStrand	1	chr7	110699285	110699365	protein_coding	Olfr613	utr5	ENSMUSG00000078624	NonProperStrand	13	1	-inf
chr4	143748332	143749010	protein_coding	Oog3	exon	ENSMUSG00000050810	NonProperStrand	78	chr2	32818885	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-4.9610
chr11	3870152	3870169	protein_coding	Pes1	intron	ENSMUSG00000020430	ProperStrand	49	chr17	35089182	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-5.8825
chr9	115162988	115163040	protein_coding	Stt3b	exon	ENSMUSG00000032437	ProperStrand	66	chr17	35299543	35299633	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-4.5941
chr12	114290175	114290191	protein_coding	Pacs2	intron	ENSMUSG00000021143	NonProperStrand	302	chr13	22006726	22006760	tRNA	tRNA85-LeuCAA	.	1848072	ProperStrand	54	1	-10.2866
chr17	14033226	14035965	protein_coding	Mllt4	exon	ENSMUSG00000068036	ProperStrand	156	chr8	32260335	32260423	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-2.8627
chr2	150363959	150363976	LTR	MTC-int	MaLR	chr2MTC-int150363320	NonProperStrand	1	chr13	74469583	74469619	protein_coding	Sdha	exon	ENSMUSG00000021577	ProperStrand	70	1	-inf
chr6	113487942	113488032	protein_coding	Fancd2	utr3	ENSMUSG00000034023	ProperStrand	65	chr2	26494803	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-5.1318
chr6	90976885	90976951	protein_coding	Nup210	exon	ENSMUSG00000030091	ProperStrand	140	chr9	120038474	120038552	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	5	-8.5904
chr11	115129897	115129987	protein_coding	Fdxr	exon	ENSMUSG00000018861	ProperStrand	5	chr17	24857717	24857797	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-7.1522
chr17	35147473	35153175	protein_coding	Vars	exon	ENSMUSG00000007029	ProperStrand	121	chr9	15118323	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	3	-6.0108
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr11	6520320	6520458	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	1	-1.3443
chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	chr7	97325180	97325253	protein_coding	Picalm	exon	ENSMUSG00000039361	ProperStrand	23	1	-11.2137
chr9	21637355	21637371	protein_coding	Dock6	exon	ENSMUSG00000032198	ProperStrand	155	chr16	23110455	23110489	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.0286
chr12	55797771	55797851	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	chr13	51743571	51743661	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-1.6941
chr11	102116617	102116646	protein_coding	BC030867	exon	ENSMUSG00000034773	ProperStrand	10	chr11	121168304	121168381	protein_coding	Foxk2	utr3	ENSMUSG00000039275	ProperStrand	38	1	-17.9793
chr17	24856676	24856762	antisense	Snhg9	.	ENSMUSG00000090101	ProperStrand	218	chr1	88247743	88247793	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-2.7031
chr16	5012169	5012190	protein_coding	Rogdi	intron	ENSMUSG00000022540	ProperStrand	7	chr4	56910496	56910618	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-10.5007
chr12	70473629	70473709	protein_coding	Arf6	utr5	ENSMUSG00000044147	ProperStrand	32	chr8	73419657	73419747	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-7.2078
chr5	32920701	32920767	protein_coding	Yes1	intron	ENSMUSG00000014932	ProperStrand	11	chr1	89673534	89673634	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-6.5694
chr10	77432750	77432767	protein_coding	Trpm2	intron	ENSMUSG00000009292	NonProperStrand	23	chr12	119539884	119539901	protein_coding	Sp4	utr5	ENSMUSG00000025323	ProperStrand	6	1	-18.5851
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr2	91771089	91771117	protein_coding	Mdk	exon	ENSMUSG00000027239	ProperStrand	56	1	-8.9780
chr1	145626028	145626108	protein_coding	Uchl5	intron	ENSMUSG00000018189	ProperStrand	15	chr1	145626106	145626196	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-11.6456
chr8	119984740	119984789	protein_coding	4933407C03Rik	utr3	ENSMUSG00000034390	ProperStrand	48	chr2	166890779	166890824	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	5	-19.9413
chr13	53110975	53110991	SINE	B4	B4	chr13B453110717	ProperStrand	10	chr9	61761173	61761200	protein_coding	Rplp1	exon	ENSMUSG00000007892	ProperStrand	116	1	-15.6519
chr4	126000157	126000174	protein_coding	Tekt2	exon	ENSMUSG00000028845	ProperStrand	31	chr11	106362304	106362325	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-7.1539
chr11	115359127	115359217	protein_coding	Hn1	utr3	ENSMUSG00000020737	ProperStrand	18	chr1	39605605	39605685	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-9.7751
chr10	79879959	79880062	protein_coding	Tcf3	exon	ENSMUSG00000020167	NonProperStrand	24	chr19	20873672	20873688	protein_coding	Tmc1	exon	ENSMUSG00000024749	NonProperStrand	8	1	-18.7770
chr6	127837066	127837083	LTR	MTEa	MaLR	chr6MTEa127836769	ProperStrand	9	chr4	131865855	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.2544
chr6	125119915	125129766	protein_coding	Ncapd2	exon	ENSMUSG00000038252	ProperStrand	170	chr10	23505187	23505279	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-1.0164
chrX	83547356	83547372	protein_coding	Mageb4	intron	ENSMUSG00000035427	NonProperStrand	191	chr19	8799022	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-3.6188
chr8	128644932	128645022	Simple_repeat	(GGA)n	Simple_repeat	chr8(GGA)n128644641	NonProperStrand	1	chr9	14940348	14940428	Simple_repeat	(TCC)n	Simple_repeat	chr9(TCC)n14940063	ProperStrand	1	1	-inf
chr5	144578838	144632792	protein_coding	Eif2ak1	exon	ENSMUSG00000029613	ProperStrand	37	chr15	79908929	79908983	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-6.4258
chr12	41824609	41824625	protein_coding	Immp2l	intron	ENSMUSG00000056899	NonProperStrand	19	chr11	69481405	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.3947
chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	chr1	102076758	102076790	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	1	-3.2674
chr4	153522828	153522848	protein_coding	Wdr8	exon	ENSMUSG00000029029	ProperStrand	1	chr2	139980597	139980672	protein_coding	Esf1	exon	ENSMUSG00000045624	ProperStrand	16	1	-inf
chrX	128094556	128094576	SINE	B1_Mus1	Alu	chrXB1_Mus1128094517	ProperStrand	4	chr11	76615261	76615759	protein_coding	Cpd	exon	ENSMUSG00000020841	ProperStrand	46	1	-19.8408
chr14	45996489	45996508	protein_coding	Gnpnat1	utr3	ENSMUSG00000037722	ProperStrand	5	chr16	23109046	23109090	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-12.4346
chr6	47738068	47738104	misc_RNA	Y_RNA	.	ENSMUSG00000065701	ProperStrand	129	chr12	31989475	31989599	protein_coding	Lamb1	exon	ENSMUSG00000002900	ProperStrand	87	1	-11.0295
chr17	34702550	34702640	protein_coding	Notch4	exon	ENSMUSG00000015468	ProperStrand	11	chr4	131908717	131908797	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.1344
chr5	77697066	77697156	protein_coding	Rest	exon	ENSMUSG00000029249	ProperStrand	136	chr7	134671430	134671510	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-6.2494
chr11	119136228	119136244	protein_coding	Gaa	exon	ENSMUSG00000025579	NonProperStrand	201	chr3	108357378	108357418	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-2.3462
chr12	56966967	56966986	protein_coding	Brms1l	utr3	ENSMUSG00000012076	NonProperStrand	12	chr17	13112450	13112511	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	4	-19.8308
chr5	136609138	136609194	protein_coding-noncoding	Lrwd1	utr3	ENSMUSG00000029703	ProperStrand	2	chr8	73419657	73419692	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-10.3981
chr9	65127126	65127142	protein_coding	Cilp	exon	ENSMUSG00000042254	ProperStrand	212	chr5	151755614	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-5.2534
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr8	77747355	77747398	protein_coding	Rasd2	utr3	ENSMUSG00000034472	ProperStrand	18	1	-7.3449
chr15	79913288	79913346	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr14	52694963	52694986	protein_coding	Hnrnpc	exon	ENSMUSG00000060373	ProperStrand	75	1	-3.1844
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr19	23332023	23332040	protein_coding	Smc5	exon	ENSMUSG00000024943	ProperStrand	146	1	-4.1873
chr7	53089954	53089976	protein_coding	Grin2d	intron	ENSMUSG00000002771	NonProperStrand	31	chr13	9494122	9494139	protein_coding	Dip2c	exon	ENSMUSG00000048264	ProperStrand	27	1	-16.2115
chr8	23782210	23782807	protein_coding	Ikbkb	exon	ENSMUSG00000031537	ProperStrand	11	chr4	131908236	131908355	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.3989
chr14	121315333	121315349	protein_coding	Ipo5	intron	ENSMUSG00000030662	ProperStrand	135	chr4	140260699	140260733	protein_coding	Rcc2	intron	ENSMUSG00000040945	ProperStrand	228	1	-9.0109
chr16	54679541	54679559	LTR	MYSERV16_I-int	ERVK	chr16MYSERV16_I-int54679027	NonProperStrand	31	chr16	91729699	91729723	protein_coding	Itsn1	utr5	ENSMUSG00000022957	ProperStrand	172	1	-12.5338
chr11	54532876	54554033	protein_coding	Cdc42se2	utr3	ENSMUSG00000052298	ProperStrand	9	chr10	23505151	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-15.3397
chr7	86278673	86278773	protein_coding	Mfge8	utr3	ENSMUSG00000030605	ProperStrand	73	chr2	130101262	130101310	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-6.2036
chr5	76050667	76050753	protein_coding	Kit	utr3	ENSMUSG00000005672	ProperStrand	58	chr4	131865948	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.8207
chr1	138382212	138391163	protein_coding	Kif14	intron	ENSMUSG00000041498	NonProperStrand	36	chr11	6428089	6428171	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-6.9589
chr11	117221794	117221841	protein_coding	Sept9	exon	ENSMUSG00000059248	ProperStrand	60	chr1	162965982	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-6.1191
chrX	71543044	71543061	protein_coding	Atp6ap1	exon	ENSMUSG00000019087	ProperStrand	11	chr4	45410585	45410603	protein_coding	Mcart1	utr3	ENSMUSG00000045973	ProperStrand	5	1	-19.4286
chr17	14019429	14020758	protein_coding	Mllt4	exon	ENSMUSG00000068036	ProperStrand	156	chrX	34622937	34623017	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	3	-4.5529
chr7	148798359	148798459	protein_coding	Ap2a2	intron	ENSMUSG00000002957	ProperStrand	76	chr17	35088957	35089012	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-5.4051
chr8	125907254	125907271	protein_coding	Tcf25	exon	ENSMUSG00000001472	ProperStrand	66	chr1	95696136	95696177	protein_coding	Dtymk	intron	ENSMUSG00000026281	ProperStrand	34	1	-14.2622
chr1	120355709	120355786	snRNA	ENSMUSG00000080542_U4atac	.	ENSMUSG00000080542	ProperStrand	73	chr9	120039574	120039664	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.9654
chr9	21584864	21602986	protein_coding	Kank2	exon	ENSMUSG00000032194	ProperStrand	196	chr16	23110454	23110560	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-2.5741
chr6	137778799	137785284	protein_coding	Dera	exon	ENSMUSG00000030225	ProperStrand	22	chr5	103854542	103891155	protein_coding	Ptpn13	utr5	ENSMUSG00000034573	NonProperStrand	74	1	-14.9273
chr19	9016661	9016677	protein_coding	Mta2	utr5	ENSMUSG00000071646	ProperStrand	70	chr13	67006613	67006629	protein_coding	Gm10767	intron	ENSMUSG00000074826	ProperStrand	2	1	-inf
chr11	40515251	40515284	protein_coding	Hmmr	utr3	ENSMUSG00000020330	ProperStrand	61	chr19	8799043	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-5.8001
chr9	22167160	22177620	protein_coding	Anln	exon	ENSMUSG00000036777	ProperStrand	133	chr7	116664819	116664909	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-3.9146
chr5	100855902	100855934	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr5	108336363	108336490	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	4	-1.1745
chr12	21396903	21396921	protein_coding	Ywhaq	utr3	ENSMUSG00000076432	ProperStrand	70	chr9	15119639	15119767	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	7	-16.7390
chr7	26472435	26472451	protein_coding	Tgfb1	utr5	ENSMUSG00000002603	NonProperStrand	154	chr7	118219704	118219740	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-2.4662
chr17	79128196	79128248	protein_coding	Strn	intron	ENSMUSG00000024077	ProperStrand	8	chr11	118900007	118900024	protein_coding	Cbx8	exon	ENSMUSG00000025578	ProperStrand	95	1	-16.4573
mmu-miR-6240	4	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr4	123148362	123148462	protein_coding	Macf1	exon	ENSMUSG00000028649	ProperStrand	320	1	-2.7581
chr11	57872145	57872255	protein_coding	Larp1	exon	ENSMUSG00000037331	ProperStrand	201	chr3	88715213	88715230	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	2	-8.0255
chr1	153759644	153759664	protein_coding	1700025G04Rik	intron	ENSMUSG00000032666	NonProperStrand	35	chr16	23110835	23110897	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.7567
chr5	73367337	73367373	protein_coding	Slain2	utr3	ENSMUSG00000036087	ProperStrand	15	chr12	112779195	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-7.5327
chr3	85924455	85924514	protein_coding	Sh3d19	exon	ENSMUSG00000028082	ProperStrand	58	chr1	89673607	89673707	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-3.3250
chr3	130943865	130943885	protein_coding	Hadh	exon	ENSMUSG00000027984	ProperStrand	35	chr2	26493366	26493485	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	4	-15.0944
chr6	54379743	54379760	lincRNA	9130019P16Rik	exon	ENSMUSG00000073067	ProperStrand	255	chr7	117189973	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-1.0251
chr1	154971281	154971297	protein_coding	Lamc2	utr3	ENSMUSG00000026479	ProperStrand	4	chr6	81992906	81992926	protein_coding	Fam176a	intron	ENSMUSG00000035104	ProperStrand	64	1	-18.6464
chr8	87483876	87483921	protein_coding	Rnaseh2a	exon	ENSMUSG00000052926	ProperStrand	14	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.9265
chr1	88247736	88247872	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	chr18	35714159	35714294	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	23	-2.5427
chr15	38226636	38226694	protein_coding	Klf10	exon	ENSMUSG00000037465	ProperStrand	33	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-10.1839
chr6	115757991	115758091	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr4	41150095	41150158	snoRNA	ENSMUSG00000089265_SNORD121A	.	ENSMUSG00000089265	ProperStrand	370	2	-3.8248
chr8	28253677	28253694	lincRNA	4933416M07Rik	exon	ENSMUSG00000084961	ProperStrand	4	chr5	147111368	147113178	protein_coding	Cdk8	exon	ENSMUSG00000029635	ProperStrand	19	3	-inf
chr9	108389654	108389808	protein_coding	Lamb2	exon	ENSMUSG00000052911	ProperStrand	35	chr17	24665446	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	4	-18.1359
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr18	38602648	38607375	protein_coding	Ndfip1	exon	ENSMUSG00000024425	ProperStrand	42	1	-9.5077
chr2	154718507	154718551	protein_coding	Eif2s2	utr5	ENSMUSG00000074656	ProperStrand	96	chr4	131908236	131908284	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-1.6544
chr8	13416895	13416912	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr4	57706987	57707003	protein_coding	Palm2	intron	ENSMUSG00000090053	NonProperStrand	187	1	-4.2497
chr9	120039540	120039688	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	chr9	15119287	15119426	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	21	-1.4188
chr3	145601279	145601864	protein_coding	2410004B18Rik	exon	ENSMUSG00000036873	ProperStrand	10	chr11	69483136	69483279	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-5.8555
chr1	40081779	40081846	protein_coding	Map4k4	utr3	ENSMUSG00000026074	ProperStrand	348	chr17	22988855	22988887	protein_coding	Zfp945	exon	ENSMUSG00000059142	ProperStrand	10	1	-13.4557
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr6	149283953	149283969	protein_coding	2810474O19Rik	utr3	ENSMUSG00000032712	ProperStrand	70	1	-8.4818
chr18	77368800	77371867	protein_coding	Pias2	exon	ENSMUSG00000025423	ProperStrand	52	chr10	23505149	23505275	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-4.2677
chr5	118458477	118458493	protein_coding	Fbxo21	utr3	ENSMUSG00000032898	NonProperStrand	6	chr11	62416601	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-9.8702
chr7	13615029	13615120	protein_coding	Trim28	exon	ENSMUSG00000005566	ProperStrand	296	chr2	18002264	18002296	protein_coding	Mllt10	intron	ENSMUSG00000026743	ProperStrand	30	1	-11.5150
chr11	120422347	120422373	protein_coding	P4hb	utr3	ENSMUSG00000025130	ProperStrand	83	chr11	8870596	8870614	protein_coding	Pkd1l1	intron	ENSMUSG00000046634	NonProperStrand	15	1	-15.4778
chr4	151730301	151730737	protein_coding	Chd5	exon	ENSMUSG00000005045	NonProperStrand	147	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-6.8097
chr9	51895210	51895310	protein_coding	Rdx	utr3	ENSMUSG00000032050	ProperStrand	60	chr10	23505221	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.2332
chr15	100626981	100627042	protein_coding	Slc4a8	exon	ENSMUSG00000023032	ProperStrand	15	chr18	35716848	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.7126
chr5	121655016	121655099	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	chr17	35384120	35384195	snoRNA	ENSMUSG00000065273_SNORD83	.	ENSMUSG00000065273	ProperStrand	244	4	-5.8078
chr11	97642952	97643043	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	chr12	110918155	110918221	snoRNA	ENSMUSG00000065749_AF357428	.	ENSMUSG00000065749	ProperStrand	218	3	-2.2953
chr7	123674876	123674900	protein_coding	Nucb2	intron	ENSMUSG00000030659	NonProperStrand	1	chr11	77873515	77873599	protein_coding	Flot2	utr3	ENSMUSG00000061981	ProperStrand	108	1	-inf
chr5	74489251	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr9	104065047	104065147	protein_coding	Dnajc13	exon	ENSMUSG00000032560	ProperStrand	60	1	-5.6218
chr4	133927993	133928029	protein_coding	Extl1	utr5	ENSMUSG00000028838	ProperStrand	14	chr4	131865855	131865945	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	7	-inf
chr7	52958453	52958469	protein_coding	Car11	exon	ENSMUSG00000003273	NonProperStrand	250	chr11	106362639	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-4.6119
chr7	29605745	29606242	protein_coding	Hnrnpl	exon	ENSMUSG00000015165	ProperStrand	150	chr9	120039585	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-3.2296
chr5	100855900	100855974	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr15	34370545	34370625	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	7	-0.7514
chr19	8989215	8990178	protein_coding	Ganab	exon	ENSMUSG00000071650	ProperStrand	145	chr7	116663665	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	4	-5.1099
chr8	72611020	72612034	protein_coding	Hapln4	exon	ENSMUSG00000007594	ProperStrand	5	chr7	117189957	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-8.3295
chr1	88423329	88423347	protein_coding	Ptma	utr5	ENSMUSG00000026238	ProperStrand	385	chr5	121655016	121655096	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	4	-3.9603
chr11	3056052	3056088	protein_coding	Sfi1	intron	ENSMUSG00000023764	ProperStrand	17	chrX	34622961	34622991	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-5.5847
chr10	121242090	121244926	protein_coding	Srgap1	exon	ENSMUSG00000020121	NonProperStrand	80	chr18	73693165	73693188	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-4.9649
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr1	93342189	93345290	protein_coding	Per2	exon	ENSMUSG00000055866	ProperStrand	114	1	-7.4351
chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	chr8	113362430	113362455	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	1	-1.6113
chr17	29838842	29838903	protein_coding	1110021J02Rik	intron	ENSMUSG00000024018	ProperStrand	7	chr5	130300525	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-6.6707
chr4	131908374	131908464	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	2	-0.9228
chr19	47182088	47182188	protein_coding	Pdcd11	exon	ENSMUSG00000025047	ProperStrand	137	chr18	33954873	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	3	-5.6408
chr13	59738651	59738668	protein_coding	Golm1	utr3	ENSMUSG00000021556	NonProperStrand	12	chr4	131865855	131865961	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.6729
chr17	46167292	46167376	protein_coding	Vegfa	intron	ENSMUSG00000023951	ProperStrand	43	chr5	74489606	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-4.4078
chr18	20179579	20179600	LTR	MTE2a	MaLR	chr18MTE2a20179205	NonProperStrand	2	chr17	91284450	91284467	protein_coding	Nrxn1	intron	ENSMUSG00000024109	ProperStrand	34	2	-inf
chr15	99433435	99433452	protein_coding	Aqp6	exon	ENSMUSG00000043144	ProperStrand	2	chr18	35716722	35716812	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	NonProperStrand	45	1	-19.7664
chr2	32067736	32071580	protein_coding	Prrc2b	exon	ENSMUSG00000039262	ProperStrand	344	chr8	73419706	73419786	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-1.2170
chr11	116401340	116401440	protein_coding	Ube2o	exon	ENSMUSG00000020802	ProperStrand	134	chr3	123210854	123210917	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-0.9145
chr5	77738902	77738918	protein_coding	Noa1	exon	ENSMUSG00000036285	ProperStrand	147	chr7	133436112	133436144	protein_coding	Sbk1	exon	ENSMUSG00000042978	ProperStrand	24	1	-13.3721
chr2	90235299	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	111469101	111470229	protein_coding	Zfhx3	exon	ENSMUSG00000038872	ProperStrand	65	2	-7.1973
chr4	37797868	37797958	LTR	RMER17A2	ERVK	chr4RMER17A237797638	ProperStrand	1	chr4	93777120	93777200	lincRNA	Gm12648	intron	ENSMUSG00000085931	ProperStrand	5	1	-inf
chr19	11853632	11856112	protein_coding	Stx3	utr3	ENSMUSG00000041488	ProperStrand	37	chr7	148634776	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-4.9111
chr3	127382745	127382761	protein_coding	Alpk1	exon	ENSMUSG00000028028	ProperStrand	19	chr4	21606097	21606114	protein_coding	Prdm13	exon	ENSMUSG00000040478	ProperStrand	51	1	-15.9836
chr2	113673186	113673220	protein_coding	Arhgap11a	exon	ENSMUSG00000041219	ProperStrand	47	chr16	23110456	23110546	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.8869
chr18	38409775	38409791	lincRNA	1700086O06Rik	exon	ENSMUSG00000086988	NonProperStrand	28	chr4	121870889	122132510	pseudogene	Gm12896	.	ENSMUSG00000083558	NonProperStrand	19	1	-17.0491
chr2	130101990	130102080	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	chr13	96100554	96100634	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	1	-0.9001
chr2	13715283	13715301	protein_coding	St8sia6	utr5	ENSMUSG00000003418	NonProperStrand	1	chrX	146893656	146893673	protein_coding	Tmem29	utr5	ENSMUSG00000041353	ProperStrand	1	1	-inf
chr1	162967705	162968582	non_coding	Gas5	.	ENSMUSG00000053332	ProperStrand	144	chr2	26493366	26493493	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	44	-20.3574
chr13	108538314	108538352	protein_coding	Zswim6	exon	ENSMUSG00000032846	ProperStrand	23	chr9	15119649	15119739	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.3979
chr10	86221857	86221873	protein_coding	BC030307	exon	ENSMUSG00000044937	ProperStrand	77	chr4	131866648	131866666	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	1	-8.6052
chr10	39452914	39452955	protein_coding	Rev3l	intron	ENSMUSG00000019841	ProperStrand	39	chr2	26494708	26494740	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-6.5883
chr4	43505808	43505898	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr8	114525387	114525413	protein_coding	Kars	exon	ENSMUSG00000031948	ProperStrand	89	1	-2.3829
chr13	68759738	68764669	protein_coding	Adcy2	exon	ENSMUSG00000021536	ProperStrand	237	chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-3.8062
chr4	154448605	154448625	protein_coding	Rer1	utr3	ENSMUSG00000029048	ProperStrand	9	chr16	23111381	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-7.7762
chr18	35716684	35716762	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	chr11	58115972	58116007	tRNA	tRNA1911-LeuCAA	.	1718271	ProperStrand	165	1	-0.7484
chr4	55431651	55431667	lincRNA	Gm12505	exon	ENSMUSG00000087070	ProperStrand	447	chr7	134671387	134671517	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-3.9603
chr16	5077351	5077369	protein_coding	Ubn1	exon	ENSMUSG00000039473	NonProperStrand	5	chr6	125136468	125136568	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	1	-11.5819
chr11	119136228	119136244	protein_coding	Gaa	exon	ENSMUSG00000025579	NonProperStrand	201	chr9	109988714	109988763	protein_coding	Dhx30	exon	ENSMUSG00000032480	ProperStrand	29	1	-12.3593
chr9	109965591	109965625	protein_coding	Mtap4	exon	ENSMUSG00000032479	ProperStrand	188	chr14	76247729	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	3	-5.7830
chr2	6759465	6759481	protein_coding	Celf2	intron	ENSMUSG00000002107	NonProperStrand	26	chr19	8798484	8798560	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-6.8655
chr16	91270626	91270642	protein_coding	Olig1	exon	ENSMUSG00000046160	NonProperStrand	32	chr19	47970971	47970987	protein_coding	Itprip	utr3	ENSMUSG00000079254	ProperStrand	75	1	-14.1350
chr4	141241029	141241119	protein_coding	Rsc1a1	exon	ENSMUSG00000040715	ProperStrand	2	chr7	29136529	29136609	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-9.5181
chr7	133991458	133991474	protein_coding	Doc2a	utr5	ENSMUSG00000052301	ProperStrand	3	chr1	93342189	93345290	protein_coding	Per2	exon	ENSMUSG00000055866	ProperStrand	114	1	-19.0244
chr7	29605710	29605746	protein_coding	Hnrnpl	exon	ENSMUSG00000015165	ProperStrand	150	chr14	52919038	52919055	protein_coding	Mettl3	intron	ENSMUSG00000022160	ProperStrand	54	1	-11.6868
chr8	129468745	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	chr4	131866609	131866676	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	8	-11.3410
chr17	36115533	36115613	protein_coding-noncoding	Prr3	utr3	ENSMUSG00000038500	ProperStrand	1	chr17	36115497	36115587	protein_coding	Prr3	utr5	ENSMUSG00000038500	ProperStrand	6	1	-inf
chrX	20247734	20259658	protein_coding	Uba1	utr3	ENSMUSG00000001924	ProperStrand	156	chr10	110918557	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	3	-5.0752
chr12	66058250	66058267	protein_coding	Klhl28	exon	ENSMUSG00000020948	ProperStrand	1	chr9	120039627	120039674	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-inf
chr4	151734979	151734997	protein_coding	Chd5	exon	ENSMUSG00000005045	ProperStrand	51	chr7	38468013	38468033	protein_coding	Zfp536	intron	ENSMUSG00000043456	ProperStrand	57	1	-13.7444
chr18	61715235	61715289	protein_coding	Csnk1a1	utr5	ENSMUSG00000024576	ProperStrand	64	chr4	131908356	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-5.7003
chr1	89609811	89609856	protein_coding	Inpp5d	exon	ENSMUSG00000026288	ProperStrand	75	chr16	23111383	23111473	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.9676
chr9	114811508	114811539	protein_coding	Gpd1l	utr3	ENSMUSG00000050627	ProperStrand	7	chr4	131865855	131865981	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-18.8689
chr17	53819013	53822921	protein_coding	Sgol1	exon	ENSMUSG00000023940	ProperStrand	17	chr18	75160717	75160777	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	1	-11.7472
chr5	66733800	66733831	protein_coding	Apbb2	intron	ENSMUSG00000029207	NonProperStrand	14	chr4	131908809	131908893	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-6.3022
chr2	32818840	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	chr19	8798740	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	20	-11.2501
chr2	59182938	59183028	protein_coding	Pkp4	utr3	ENSMUSG00000026991	ProperStrand	33	chr11	69483145	69483225	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.5168
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	59991434	59991450	protein_coding	Hmgb2	exon	ENSMUSG00000054717	NonProperStrand	96	1	-3.5798
chr6	82676775	82676846	protein_coding	Hk2	utr3	ENSMUSG00000000628	ProperStrand	88	chr7	118219589	118219679	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-5.8863
chr12	110888840	110888913	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr6	140601717	140601807	protein_coding	Aebp2	utr3	ENSMUSG00000030232	ProperStrand	34	1	-9.8100
chr7	87496104	87496120	protein_coding	Man2a2	utr3	ENSMUSG00000038886	ProperStrand	18	chr4	131908810	131908871	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.1942
chr6	87795671	87795749	protein_coding	Cnbp	exon	ENSMUSG00000030057	ProperStrand	46	chr17	35089182	35089210	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	3	-13.8515
chr17	33961417	33961438	protein_coding	Rps28	utr5	ENSMUSG00000067288	ProperStrand	52	chr2	26493360	26493474	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-4.0106
chr12	89699698	89699714	protein_coding	Adck1	utr3	ENSMUSG00000021044	NonProperStrand	42	chr8	27091218	27091234	protein_coding	4930444A02Rik	utr3	ENSMUSG00000037251	NonProperStrand	57	1	-14.1318
chr2	32087667	32087697	protein_coding	Prrc2b	utr3	ENSMUSG00000039262	ProperStrand	344	chr19	8799054	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-2.5703
chr1	152268927	152269668	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	chr4	106233971	106237030	protein_coding	Dhcr24	exon	ENSMUSG00000034926	ProperStrand	94	1	-8.0104
chr14	35168545	35168563	protein_coding	Fam25c	utr5	ENSMUSG00000043681	NonProperStrand	29	chr16	23110918	23110993	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0921
chr13	55417324	55417355	protein_coding	Nsd1	utr3	ENSMUSG00000021488	ProperStrand	186	chr2	26494709	26494800	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.2758
chr14	67975508	67975524	protein_coding	Ebf2	intron	ENSMUSG00000022053	ProperStrand	20	chr11	69483136	69483237	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.4692
chr11	98868525	98868584	protein_coding	Top2a	exon	ENSMUSG00000020914	ProperStrand	324	chr17	24857716	24857738	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	3	-1.1125
chr11	50628361	50628377	protein_coding	Zfp354c	exon	ENSMUSG00000044807	ProperStrand	21	chr16	23110828	23110860	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-4.6345
chr11	62416575	62416599	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr12	12944235	12944251	protein_coding	Mycn	exon	ENSMUSG00000037169	NonProperStrand	109	1	-7.7788
chr6	114260511	114260527	protein_coding	Slc6a1	exon	ENSMUSG00000030310	NonProperStrand	147	chr11	55296276	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-4.4413
chr14	25251809	25251899	LINE	L1_Mus4	L1	chr14L1_Mus425250198	NonProperStrand	1	chr18	78092209	78092289	protein_coding	Pstpip2	intron	ENSMUSG00000025429	NonProperStrand	2	1	-inf
chr9	113887269	113888021	protein_coding	Fbxl2	utr3	ENSMUSG00000032507	ProperStrand	7	chr16	23110840	23111010	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-6.1472
chr3	126547274	126547291	protein_coding	Camk2d	utr3	ENSMUSG00000053819	NonProperStrand	20	chr8	32260372	32260425	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-6.7965
chr14	21426793	21426893	protein_coding	Usp54	utr5	ENSMUSG00000034235	ProperStrand	20	chr4	122970487	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-9.6307
chr2	146125210	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	chr4	131865855	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	5	-3.5715
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	129998643	129998709	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	2	-0.9908
chr2	181603367	181603416	protein_coding	Polr3k	utr3	ENSMUSG00000038628	ProperStrand	3	chrX	143918835	143918875	snoRNA	ENSMUSG00000084421_SNORA35	.	ENSMUSG00000084421	ProperStrand	293	2	-inf
chr3	95038414	95038435	protein_coding	Cdc42se1	utr3	ENSMUSG00000046722	ProperStrand	12	chr16	23111391	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-6.8529
chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	chr15	37902767	37903073	protein_coding	Ubr5	exon	ENSMUSG00000037487	ProperStrand	258	1	-6.4958
chr6	125112637	125112861	protein_coding	Gapdh	exon	ENSMUSG00000057666	ProperStrand	356	chr16	23110472	23110552	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	6	-3.5992
chr2	26493470	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr2	20730758	20730775	protein_coding	Etl4	exon	ENSMUSG00000036617	NonProperStrand	23	1	-8.1130
chr4	129164904	129165029	protein_coding	Bsdc1	utr3	ENSMUSG00000040859	ProperStrand	14	chr15	79908957	79908983	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	6	-21.8467
chr2	152933682	152933707	SINE	RSINE1	B4	chr2RSINE1152933679	ProperStrand	1	chr6	115835917	115835935	protein_coding	Ift122	intron	ENSMUSG00000030323	NonProperStrand	3	1	-inf
chr19	44377533	44380361	protein_coding	Scd2	exon	ENSMUSG00000025203	ProperStrand	219	chr10	23505152	23505246	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	7	-3.1060
chr11	120135736	120135825	protein_coding	Bahcc1	exon	ENSMUSG00000039741	ProperStrand	118	chr1	162965529	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.1050
chr9	78023184	78023223	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr15	51795360	51795388	protein_coding	Rad21	utr3	ENSMUSG00000022314	ProperStrand	85	1	-5.1975
chr2	31022673	31022694	protein_coding	Gpr107	intron	ENSMUSG00000000194	ProperStrand	99	chr7	150429747	150429763	protein_coding	Kcnq1	intron	ENSMUSG00000009545	NonProperStrand	133	1	-10.7092
chrX	13269163	13269180	protein_coding	Cask	intron	ENSMUSG00000031012	ProperStrand	41	chr19	8799022	8799048	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-6.5853
chr7	80547651	80547667	protein_coding	Rgma	intron	ENSMUSG00000070509	ProperStrand	46	chr4	131865865	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-3.9386
chr8	90304979	90304995	protein_coding	Zfp423	exon	ENSMUSG00000045333	NonProperStrand	44	chr5	121655100	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.3327
chr1	63225259	63225322	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	chr2	130101987	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	2	-2.6481
chr10	40599918	40599934	protein_coding	Cdc40	intron	ENSMUSG00000038446	ProperStrand	34	chr2	158182201	158182279	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-6.1166
chr11	120676073	120676367	protein_coding	Fasn	exon	ENSMUSG00000025153	ProperStrand	298	chr1	187066847	187066917	snoRNA	ENSMUSG00000077571_Snora36b	.	ENSMUSG00000077571	ProperStrand	244	1	-7.3015
chr11	19991312	19994279	protein_coding	Actr2	exon	ENSMUSG00000020152	ProperStrand	72	chr6	65776509	65776552	protein_coding	Prdm5	intron	ENSMUSG00000029913	ProperStrand	50	4	-19.9916
chr4	138918102	138918119	protein_coding	C230096C10Rik	exon	ENSMUSG00000078517	ProperStrand	69	chr7	116663633	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-6.1198
chr15	10132768	10132784	protein_coding	Prlr	intron	ENSMUSG00000005268	ProperStrand	2	chr7	116664868	116664906	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-9.7350
chr2	158184105	158184208	snoRNA	ENSMUSG00000064995_SNORA71	.	ENSMUSG00000064995	ProperStrand	430	chr8	73419655	73419772	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-0.8582
chr1	24619453	24619547	protein_coding	Gm10222	exon	ENSMUSG00000067736	NonProperStrand	11	chr4	131908234	131908353	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-7.4568
chr2	37496446	37496528	protein_coding	Strbp	exon	ENSMUSG00000026915	ProperStrand	90	chr9	59523461	59525860	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	1	-6.3752
chr10	38869687	38869703	protein_coding	Tube1	utr3	ENSMUSG00000019845	NonProperStrand	2	chr16	23109051	23109093	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-14.7417
chr2	158185537	158185657	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr11	116938556	116938752	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	13	-16.9887
chr12	20441590	20441680	Unknown	MurSatRep1	Unknown	chr12MurSatRep120441404	ProperStrand	2	chr14	76247753	76247833	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-11.5302
chr2	90235292	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	72290893	72290974	snRNA	ENSMUSG00000093111_AC120136.1	.	ENSMUSG00000093111	ProperStrand	137	2	-5.0791
chr2	119786402	119786489	protein_coding-noncoding	Mga	utr5	ENSMUSG00000033943	ProperStrand	2	chr4	116875135	116875225	snRNA	ENSMUSG00000070228_U5	.	ENSMUSG00000070228	ProperStrand	131	1	-19.1087
chr11	79833206	79833241	protein_coding	Suz12	exon	ENSMUSG00000017548	ProperStrand	53	chr1	162966818	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	2	-10.5240
chr1	74576290	74576335	protein_coding	Rqcd1	utr3	ENSMUSG00000026174	ProperStrand	16	chr2	158185580	158185655	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-9.1496
chr15	34371063	34371100	protein_coding	Rpl30	exon	ENSMUSG00000058600	ProperStrand	65	chr4	131908809	131908852	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-2.1839
chr4	122968627	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	chr8	13876097	13876177	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-0.9090
chr9	110796650	110796801	protein_coding	Als2cl	exon	ENSMUSG00000044037	ProperStrand	10	chr15	82980097	82980224	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	3	-inf
chr11	120429512	120432839	protein_coding	P4hb	exon	ENSMUSG00000025130	ProperStrand	83	chr1	88252850	88252897	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-5.9998
chr7	13516147	13516193	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr18	35102297	35102342	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-2.2514
chr2	127953344	127953361	protein_coding-noncoding	Bcl2l11	utr5	ENSMUSG00000027381	NonProperStrand	17	chr7	96911118	96911135	protein_coding	Me3	intron	ENSMUSG00000030621	NonProperStrand	8	1	-19.2248
chr7	130363533	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	1	-8.7442
chr6	94776854	94776880	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	chr17	35087895	35087947	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-1.4811
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr13	19684241	19684257	protein_coding	Epdr1	utr3	ENSMUSG00000002808	ProperStrand	46	2	-13.5431
chr8	74146989	74147044	protein_coding	Glt25d1	exon	ENSMUSG00000034807	ProperStrand	36	chr4	131865868	131865900	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.6115
chr11	6520321	6520457	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	chr10	23506278	23506312	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	4	-6.9274
chr8	24559870	24559887	protein_coding	Sfrp1	utr3	ENSMUSG00000031548	NonProperStrand	10	chr6	117822179	117822195	protein_coding	Zfp239	utr3	ENSMUSG00000042097	ProperStrand	6	1	-19.4901
chr12	75047972	75047997	protein_coding	Hif1a	utr3	ENSMUSG00000021109	ProperStrand	20	chr10	110928142	110929146	protein_coding	Nap1l1	exon	ENSMUSG00000058799	ProperStrand	185	1	-13.2818
chr3	134151041	134151057	lincRNA	Gm16742	intron	ENSMUSG00000084777	NonProperStrand	42	chr9	70960076	70960092	protein_coding	Aqp9	exon	ENSMUSG00000032204	NonProperStrand	118	1	-12.6749
chr12	83551118	83551145	protein_coding	Sipa1l1	utr3	ENSMUSG00000042700	ProperStrand	84	chr19	8963026	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-3.1921
chr11	121218077	121218093	protein_coding	Rab40b	utr3	ENSMUSG00000025170	ProperStrand	4	chr15	34370598	34370662	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	4	-inf
chr5	74489276	74489325	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr11	98855576	98855683	protein_coding	Top2a	exon	ENSMUSG00000020914	ProperStrand	324	1	-2.4881
chr8	113578519	113579005	protein_coding	Aars	exon	ENSMUSG00000031960	ProperStrand	355	chr5	130295454	130295534	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-2.0187
chr2	102926980	102926997	protein_coding	Apip	intron	ENSMUSG00000010911	NonProperStrand	26	chr11	6428060	6428089	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.7683
chr7	134341340	134346710	protein_coding	Tbc1d10b	exon	ENSMUSG00000042492	ProperStrand	187	chr9	15118322	15118378	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	3	-4.4883
chr8	125626989	125627005	snoRNA	ENSMUSG00000064450_Snord68	.	ENSMUSG00000064450	ProperStrand	181	chr17	24856662	24856753	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-4.2853
chr11	78214290	78214307	antisense	Gm11194	.	ENSMUSG00000085747	ProperStrand	35	chr11	75410730	75410820	protein_coding	Pitpna	intron	ENSMUSG00000017781	ProperStrand	12	3	-19.8410
chr8	73223347	73223400	protein_coding	Jund	exon	ENSMUSG00000071076	ProperStrand	50	chr5	130300460	130300494	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.8268
chr12	112779171	112779271	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	chr4	116827121	116827177	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	6	-3.1568
chr12	17284099	17285379	protein_coding	Pdia6	exon	ENSMUSG00000020571	ProperStrand	114	chr10	90581049	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-3.5950
chr12	17552949	17553059	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr18	35102297	35102367	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	6	-2.8742
chr16	57391761	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr3	138566638	138566679	protein_coding	Tspan5	utr3	ENSMUSG00000028152	ProperStrand	19	1	-10.1169
chr5	122029677	122030636	protein_coding	Aldh2	exon	ENSMUSG00000029455	ProperStrand	108	chr4	131865856	131865936	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.9473
chr7	28091586	28091639	protein_coding	Ltbp4	exon	ENSMUSG00000040488	ProperStrand	91	chr6	115757992	115758092	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-4.6657
chr11	62416577	62416599	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr15	10405664	10405764	protein_coding	Brix1	utr3	ENSMUSG00000022247	ProperStrand	32	1	-10.2388
chr18	34791712	34792039	protein_coding	Kif20a	exon	ENSMUSG00000003779	ProperStrand	50	chr16	23111689	23111753	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.1991
chr2	92201407	92201497	protein_coding	Phf21a	utr3	ENSMUSG00000058318	ProperStrand	25	chr4	131866204	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-5.3453
mmu-miR-6240	3	26	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr1	155287307	155287354	snoRNA	ENSMUSG00000064435_SNORA4	.	ENSMUSG00000064435	ProperStrand	263	1	-3.1042
mmu-miR-6238	1	18	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr4	115164807	115164823	protein_coding	Cyp4a14	exon	ENSMUSG00000028715	ProperStrand	14	1	-13.5014
chr4	69910395	69925647	protein_coding	Cdk5rap2	utr3	ENSMUSG00000039298	ProperStrand	810	chr11	68886944	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	2	-0.7419
chr2	90235315	90235347	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	116991019	116991036	protein_coding	Rnf220	intron	ENSMUSG00000028677	ProperStrand	131	1	-3.0164
chr11	95541078	95541132	protein_coding	Phb	exon	ENSMUSG00000038845	ProperStrand	126	chr14	77424372	77424388	protein_coding	9030625A04Rik	utr3	ENSMUSG00000044350	NonProperStrand	152	1	-9.9586
chr9	120866251	120866276	protein_coding	Ctnnb1	exon	ENSMUSG00000006932	ProperStrand	214	chr16	43886827	43886853	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	1	-5.5631
chr11	4074106	4074122	protein_coding	Sf3a1	exon	ENSMUSG00000002129	ProperStrand	78	chr4	129662259	129662276	protein_coding	Bai2	utr5	ENSMUSG00000028782	ProperStrand	119	1	-11.4108
chr8	126088218	126088259	rRNA	n-R5s115	.	ENSMUSG00000075862	ProperStrand	31	chr4	131865392	131865460	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-5.2733
chr16	5009294	5009325	protein_coding	Rogdi	utr3	ENSMUSG00000022540	ProperStrand	7	chr2	59635768	59637650	protein_coding	Tanc1	exon	ENSMUSG00000035168	ProperStrand	80	2	-inf
chr1	71672583	71672665	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr5	130295440	130295530	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-0.7039
chr3	78898226	78898314	protein_coding	Rapgef2	exon	ENSMUSG00000062232	ProperStrand	14	chr9	64143809	64143877	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-10.7252
chr5	125866519	125866609	protein_coding	Ubc	exon	ENSMUSG00000008348	ProperStrand	13	chr1	161270464	161270544	snoRNA	ENSMUSG00000089536_Scarna3a	.	ENSMUSG00000089536	ProperStrand	247	1	-13.5946
chr7	138055759	138055849	protein_coding	Plekha1	utr3	ENSMUSG00000040268	ProperStrand	15	chr14	76247760	76247840	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	5	-19.7552
chr5	138608438	138608456	protein_coding	Mcm7	exon	ENSMUSG00000029730	NonProperStrand	10	chr18	35716705	35716788	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-5.5279
chr13	49243168	49243184	protein_coding	Wnk2	utr5	ENSMUSG00000037989	NonProperStrand	67	chr9	78215083	78215554	protein_coding	Dppa5a	exon	ENSMUSG00000060461	ProperStrand	79	1	-12.5381
chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	chr16	23111707	23111797	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-0.7874
chr6	83318070	83318086	protein_coding	Tet3	exon	ENSMUSG00000034832	NonProperStrand	93	chr17	35089181	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-4.6370
chr2	157109405	157119916	protein_coding	Rpn2	exon	ENSMUSG00000027642	ProperStrand	363	chr2	26494721	26494822	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	3	-1.9107
chr17	46819809	46819889	protein_coding	Mea1	utr3	ENSMUSG00000002768	NonProperStrand	2	chr4	131865887	131865977	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-8.7800
chr12	103123765	103123784	protein_coding	Trip11	exon	ENSMUSG00000021188	NonProperStrand	3	chr13	97863583	97863600	protein_coding	Fam169a	exon	ENSMUSG00000041817	ProperStrand	12	1	-inf
chr9	30861539	30861639	protein_coding	Zbtb44	exon	ENSMUSG00000047412	ProperStrand	68	chr2	26493365	26493421	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	6	-18.2136
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	42212573	42212589	protein_coding	Bod1l	exon	ENSMUSG00000061755	NonProperStrand	8	1	-8.5166
chr6	113325167	113325247	protein_coding	Tada3	exon	ENSMUSG00000048930	ProperStrand	13	chr9	15119675	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.5260
chr7	52381719	52381762	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	chr15	34370566	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	5	-1.1305
chr14	103488883	103488983	protein_coding-noncoding	Fbxl3	utr3	ENSMUSG00000022124	ProperStrand	17	chr10	80641705	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	1	-10.0985
chr4	134926614	134927796	protein_coding	A330049M08Rik	exon	ENSMUSG00000043924	ProperStrand	130	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-7.3840
chr9	108416263	108416291	protein_coding	Qars	exon	ENSMUSG00000032604	ProperStrand	16	chr16	23110906	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.9771
chr4	148494141	148494157	protein_coding	Dffa	utr3	ENSMUSG00000028974	ProperStrand	55	chr10	90581036	90581126	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-4.9754
chr2	130812500	130812549	protein_coding	Atrn	exon	ENSMUSG00000027312	ProperStrand	16	chr10	110918599	110918689	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	3	-14.0377
chr9	67214950	67214969	protein_coding	Tln2	exon	ENSMUSG00000052698	ProperStrand	79	chr15	34370544	34370664	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	4	-10.4898
chr10	65682909	65682930	LINE	L1_Mus3	L1	chr10L1_Mus365682099	ProperStrand	2	chr10	110918630	110918695	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-10.7503
chr3	151751458	151751476	SINE	RSINE1	B4	chr3RSINE1151751222	ProperStrand	11	chr7	29101824	29101891	protein_coding	Supt5h	exon	ENSMUSG00000003435	ProperStrand	123	2	-21.5650
chr5	75473198	75473215	protein_coding	Gsx2	utr3	ENSMUSG00000035946	ProperStrand	307	chr1	102076760	102076790	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	1	-6.1917
chr16	89738138	89738154	LTR	LTR16C	ERVL	chr16LTR16C89737840	NonProperStrand	12	chr5	124990919	124990961	protein_coding	Tmed2	exon	ENSMUSG00000029390	ProperStrand	15	1	-19.3113
chr8	47039164	47041764	protein_coding	1700029J07Rik	exon	ENSMUSG00000071103	ProperStrand	2	chr17	35299510	35299629	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-12.1680
chr7	103956855	103956872	protein_coding	Odz4	intron	ENSMUSG00000048078	ProperStrand	93	chr19	9042728	9042787	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	1	-8.5865
chrX	135770047	135770134	protein_coding	Mum1l1	exon	ENSMUSG00000042515	ProperStrand	21	chr1	162967513	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-9.0363
chr14	121327737	121328590	protein_coding	Ipo5	exon	ENSMUSG00000030662	ProperStrand	135	chr17	24665481	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	3	-8.4989
chr9	57493277	57493293	protein_coding	Csk	utr5	ENSMUSG00000032312	ProperStrand	17	chr4	116862584	116862662	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	1	-11.4011
chr11	116535941	116535982	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr17	20504247	20504264	protein_coding	Vmn2r107	intron	ENSMUSG00000056910	NonProperStrand	7	1	-10.3003
chr14	52919038	52919055	protein_coding	Mettl3	intron	ENSMUSG00000022160	ProperStrand	54	chr8	73419743	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.3213
chr3	145651434	145651450	protein_coding	Syde2	exon	ENSMUSG00000036863	NonProperStrand	20	chr18	33954875	33954943	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-5.6191
chr13	99633765	99633824	protein_coding	Tnpo1	exon	ENSMUSG00000009470	ProperStrand	56	chr3	123210894	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.1794
chr13	51743584	51743662	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	chr15	5068442	5068480	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	3	-2.2460
chr9	67866147	67866164	LTR	MT2A	ERVL	chr9MT2A67866093	ProperStrand	1	chr6	134398830	134398899	protein_coding	Lrp6	utr3	ENSMUSG00000030201	ProperStrand	42	1	-inf
chrX	71533839	71534003	protein_coding	Taz	exon	ENSMUSG00000009995	ProperStrand	59	chr17	35088970	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-5.9008
chr3	88129648	88129664	protein_coding	0610031J06Rik	exon	ENSMUSG00000001418	ProperStrand	9	chr10	62054571	62054654	protein_coding	Ddx21	exon	ENSMUSG00000020075	ProperStrand	137	1	-15.5239
chr6	134666115	134666205	protein_coding	Dusp16	utr3	ENSMUSG00000030203	ProperStrand	27	chr5	74489574	74489654	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-5.3118
chr4	149618405	149619245	protein_coding	Eno1	exon	ENSMUSG00000063524	ProperStrand	432	chr8	73419657	73419712	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	17	-inf
chr8	119483432	119483486	protein_coding	Atmin	utr3	ENSMUSG00000047388	ProperStrand	26	chr7	148634708	148634798	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-5.6034
chr11	101273264	101275258	protein_coding	Aarsd1	exon	ENSMUSG00000075528	ProperStrand	30	chr18	35716762	35716835	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	7	-inf
chr1	169156471	169156517	protein_coding	Uck2	utr3	ENSMUSG00000026558	ProperStrand	45	chr3	33713610	33713626	protein_coding	Ccdc39	exon	ENSMUSG00000027676	ProperStrand	106	1	-12.7504
chr7	29933327	29933399	protein_coding	Rasgrp4	intron	ENSMUSG00000030589	ProperStrand	2	chr4	131908689	131908771	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-8.0336
chr7	52309977	52309993	protein_coding	Prrg2	exon	ENSMUSG00000007837	NonProperStrand	281	chr16	30308345	30308361	protein_coding	Gp5	exon	ENSMUSG00000047953	ProperStrand	7	1	-14.6494
chr5	115939535	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr17	35089181	35089231	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	14	-18.4870
chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	chr8	64017610	64028375	protein_coding	Palld	exon	ENSMUSG00000058056	NonProperStrand	125	1	-6.7198
chr6	13551593	13551688	protein_coding	Tmem168	intron	ENSMUSG00000029569	ProperStrand	17	chr2	41199972	41199989	protein_coding	Lrp1b	exon	ENSMUSG00000049252	ProperStrand	376	6	-20.2464
chrX	7248371	7248433	protein_coding	Plp2	utr5	ENSMUSG00000031146	ProperStrand	88	chr4	131908256	131908346	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.9116
chr7	16524857	16524945	protein_coding	Gltscr2	exon	ENSMUSG00000041560	ProperStrand	127	chr2	63936035	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-6.3734
chr17	31722744	31722760	protein_coding	Pknox1	intron	ENSMUSG00000006705	ProperStrand	110	chr18	39258285	39258349	protein_coding	Arhgap26	intron	ENSMUSG00000036452	ProperStrand	46	1	-12.6333
chrX	148709019	148709037	protein_coding	Kdm5c	utr3	ENSMUSG00000025332	NonProperStrand	3	chr15	34370548	34370618	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-9.7644
chr4	56794073	56797428	protein_coding	Ikbkap	exon	ENSMUSG00000028431	ProperStrand	44	chr1	162965989	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-7.0177
chr13	9833552	9833684	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr4	10498370	10498389	lincRNA	1700123O12Rik	intron	ENSMUSG00000086080	NonProperStrand	5	2	-16.1772
chrX	161690312	161690331	protein_coding	Glra2	exon	ENSMUSG00000018589	NonProperStrand	1	chr6	83111671	83111687	protein_coding	1700003E16Rik	exon	ENSMUSG00000030030	ProperStrand	352	1	-inf
mmu-miR-6240	2	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr17	35088957	35089016	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	5	-2.2358
chr4	43505671	43505792	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr11	97046360	97048729	protein_coding	Kpnb1	exon	ENSMUSG00000001440	ProperStrand	197	12	-20.4694
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr11	120148960	120148976	protein_coding	Bahcc1	exon	ENSMUSG00000039741	NonProperStrand	268	1	-8.3751
chr4	149021724	149021808	protein_coding	Clstn1	utr3	ENSMUSG00000039953	ProperStrand	173	chr19	8798738	8798807	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-2.8381
mmu-miR-6238	1	19	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr10	61329160	61330213	protein_coding	Col13a1	exon	ENSMUSG00000058806	ProperStrand	120	1	-9.1440
chrX	72214248	72214264	protein_coding-noncoding	Gab3	utr3	ENSMUSG00000032750	ProperStrand	420	chr12	17553062	17553088	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-1.6295
chr13	9833550	9833639	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr11	115870224	115870386	protein_coding	Galk1	exon	ENSMUSG00000020766	ProperStrand	24	1	-6.7632
chr12	60141414	60141508	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	chr15	5068407	5068454	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	2	-1.3007
chr14	57312831	57312861	protein_coding	Mphosph8	intron	ENSMUSG00000079184	NonProperStrand	27	chr7	116663653	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-6.6976
chr17	6232006	6232022	protein_coding	Tulp4	exon	ENSMUSG00000034377	NonProperStrand	265	chr2	166890502	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-4.6480
chr11	3649570	3649587	protein_coding	Osbp2	intron	ENSMUSG00000020435	ProperStrand	60	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-8.1590
chr15	102301163	102329041	protein_coding	Pcbp2	utr3	ENSMUSG00000056851	ProperStrand	164	chr16	23111777	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-1.2492
chr19	5460665	5460683	protein_coding	Fibp	utr5	ENSMUSG00000024911	ProperStrand	5	chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	1	-14.0665
chr4	125387994	125389129	protein_coding	Grik3	utr3	ENSMUSG00000001985	ProperStrand	126	chr4	131865855	131865966	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.5784
chr18	10052133	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr9	64143851	64143877	protein_coding	Tipin	intron	ENSMUSG00000032397	ProperStrand	32	1	-10.0676
chr7	4745689	4745748	protein_coding	Rpl28	exon	ENSMUSG00000030432	ProperStrand	220	chr7	6204947	6204963	protein_coding	Gm6792	intron	ENSMUSG00000053367	NonProperStrand	6	1	-15.4688
chr8	108379066	108379083	protein_coding	Thap11	utr5	ENSMUSG00000036442	ProperStrand	34	chr17	35384150	35384195	snoRNA	ENSMUSG00000065273_SNORD83	.	ENSMUSG00000065273	ProperStrand	244	1	-11.6473
chr13	56197540	56205697	protein_coding	H2afy	exon	ENSMUSG00000015937	ProperStrand	103	chr19	8798484	8798516	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-4.1752
chr2	29926035	29926456	protein_coding	Set	exon	ENSMUSG00000054766	ProperStrand	167	chr2	26494744	26494824	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	7	-12.1084
chr14	70121170	70121186	protein_coding	Chmp7	exon	ENSMUSG00000034190	NonProperStrand	2	chr5	108334209	108334284	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-12.2128
chr1	66877892	66878014	protein_coding	Acadl	utr3	ENSMUSG00000026003	ProperStrand	4	chr2	26493364	26493391	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-9.2834
chr11	95824205	95824648	protein_coding	Igf2bp1	utr3	ENSMUSG00000013415	ProperStrand	140	chr4	131908356	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-0.9783
chr8	129116501	129116547	protein_coding	Irf2bp2	exon	ENSMUSG00000051495	ProperStrand	25	chr17	39985460	39985494	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	2	-12.3238
chr5	86570619	86570639	protein_coding	Uba6	exon	ENSMUSG00000035898	ProperStrand	17	chr1	162966203	162966269	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	3	-inf
chr19	8798484	8798550	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	chr5	108334203	108336484	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	11	-2.2636
chr7	31361080	31361725	protein_coding	Wbp7	exon	ENSMUSG00000006307	ProperStrand	180	chr7	52382011	52382037	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	2	-7.5791
chr9	75098268	75098284	protein_coding	Myo5c	exon	ENSMUSG00000033590	ProperStrand	7	chr5	54389951	54389967	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	1	-15.2029
chr17	7504708	7504724	protein_coding	Rps6ka2	utr3	ENSMUSG00000023809	NonProperStrand	18	chr4	137492709	137493288	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-10.1616
chr19	34392966	34392986	protein_coding	Fas	intron	ENSMUSG00000024778	ProperStrand	11	chr16	23110827	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.6241
chr15	77894247	77894266	protein_coding	Cacng2	intron	ENSMUSG00000019146	NonProperStrand	10	chr16	23111777	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.2069
chr7	121197550	121197598	protein_coding	Rras2	intron	ENSMUSG00000055723	ProperStrand	26	chr16	23111389	23111479	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-6.8669
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr6	115757992	115758129	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	2	-2.8962
chr3	129341189	129341279	protein_coding	Elovl6	utr3	ENSMUSG00000041220	ProperStrand	59	chr16	23111374	23111454	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.2821
chr8	91106344	91106360	protein_coding	Nkd1	intron	ENSMUSG00000031661	ProperStrand	57	chr11	94419457	94419504	protein_coding	Acsf2	utr3	ENSMUSG00000076435	ProperStrand	34	1	-14.5551
chr4	43505826	43505906	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr5	122022182	122022766	protein_coding	Aldh2	exon	ENSMUSG00000029455	ProperStrand	108	1	-2.0629
chr12	85713286	85713452	protein_coding	Coq6	exon	ENSMUSG00000021235	ProperStrand	15	chr16	23110941	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-3.8284
chr19	7531504	7531604	protein_coding	Rtn3	exon	ENSMUSG00000024758	ProperStrand	35	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.6121
chr12	85491266	85491312	protein_coding	C130039O16Rik	utr3	ENSMUSG00000042507	ProperStrand	75	chr5	121655016	121655098	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-5.7043
chr2	103565884	103565900	protein_coding	Nat10	exon	ENSMUSG00000027185	ProperStrand	124	chr6	119054931	119054948	protein_coding	Cacna1c	intron	ENSMUSG00000051331	ProperStrand	46	1	-12.3926
chr9	56343706	56343794	protein_coding	Hmg20a	utr3	ENSMUSG00000032329	ProperStrand	87	chr14	76247792	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-3.4791
chr15	37897877	37913917	protein_coding	Ubr5	utr3	ENSMUSG00000037487	ProperStrand	258	chr17	35299509	35299644	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	2	-3.8268
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr7	134336401	134336453	protein_coding	Cd2bp2	utr3	ENSMUSG00000042502	ProperStrand	73	1	-7.4041
chr8	72863086	72863121	protein_coding	Upf1	exon	ENSMUSG00000058301	ProperStrand	90	chr3	95980293	95980411	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	3	-13.9115
chr17	88389968	88390077	protein_coding	Msh6	exon	ENSMUSG00000005370	ProperStrand	150	chr1	141374571	141374671	protein_coding	Aspm	exon	ENSMUSG00000033952	ProperStrand	64	5	-19.9203
chr5	114196656	114196746	protein_coding	Sart3	exon	ENSMUSG00000018974	ProperStrand	50	chr9	120039546	120039626	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.6542
chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	chr6	66959273	66959306	protein_coding	Gng12	intron	ENSMUSG00000036402	NonProperStrand	3	1	-16.6783
chr11	69266814	69266830	protein_coding	Dnahc2	exon	ENSMUSG00000005237	ProperStrand	95	chr5	123622050	123622066	protein_coding	Hpd	exon	ENSMUSG00000029445	ProperStrand	254	1	-9.4981
chr4	83939015	83939106	protein_coding	Bnc2	exon	ENSMUSG00000028487	ProperStrand	76	chr4	131908688	131908740	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.9200
chr19	46714572	46714588	protein_coding	D19Wsu162e	intron	ENSMUSG00000047731	NonProperStrand	12	chr17	39985432	39985499	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-9.1812
chr17	23957974	23959466	protein_coding	Srrm2	utr3	ENSMUSG00000039218	ProperStrand	521	chr4	131865381	131865493	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	7	-7.5621
chr3	88787051	88787067	protein_coding	Ash1l	exon	ENSMUSG00000028053	NonProperStrand	50	chr2	167310868	167310925	protein_coding	Spata2	exon	ENSMUSG00000047030	ProperStrand	9	1	-17.5746
chr9	65308869	65308886	protein_coding	Spg21	utr5	ENSMUSG00000032388	NonProperStrand	10	chr1	63225255	63225312	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	1	-12.5001
chr16	34705265	34706484	protein_coding	Ccdc14	exon	ENSMUSG00000022833	ProperStrand	22	chr16	23110911	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	7	-13.3827
chr7	106749609	106749666	protein_coding	Arrb1	exon	ENSMUSG00000018909	ProperStrand	46	chr15	57754545	57754580	protein_coding	Wdr67	exon	ENSMUSG00000022364	ProperStrand	11	2	-inf
chr11	78103967	78104057	protein_coding	2610507B11Rik	utr3	ENSMUSG00000010277	ProperStrand	246	chr4	122968630	122968710	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	5	-14.9734
chr16	20659521	20659630	protein_coding	Psmd2	exon	ENSMUSG00000006998	ProperStrand	99	chr16	23110981	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	7	-2.9701
chrX	131341021	131341102	protein_coding	Armcx2	exon	ENSMUSG00000033436	ProperStrand	12	chr1	89673687	89673777	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-6.3904
chr19	10525980	10525997	protein_coding	Syt7	utr3	ENSMUSG00000024743	NonProperStrand	17	chr19	8798754	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	2	-11.7916
chr6	47738068	47738108	misc_RNA	Y_RNA	.	ENSMUSG00000065701	ProperStrand	129	chr11	68716812	68717957	protein_coding	Rpl26	exon	ENSMUSG00000060938	ProperStrand	130	1	-10.2243
chr5	74489230	74489330	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr13	113342177	113342193	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	1	-1.5511
chr19	10621469	10621559	protein_coding	Cpsf7	utr3	ENSMUSG00000034820	ProperStrand	66	chr10	87873355	87873394	protein_coding	Gnptab	intron	ENSMUSG00000035311	ProperStrand	65	8	-20.8954
chr14	51427116	51427216	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr10	127522367	127522416	snoRNA	ENSMUSG00000093245_AC131120.1	.	ENSMUSG00000093245	ProperStrand	77	2	-10.8312
chr16	91688773	91688843	protein_coding	Donson	exon	ENSMUSG00000022960	ProperStrand	9	chr9	57408815	57408886	protein_coding	Scamp2	utr5	ENSMUSG00000040188	ProperStrand	12	1	-20.0762
chr19	5492626	5492650	protein_coding	Cfl1	exon	ENSMUSG00000056201	ProperStrand	88	chr10	110918549	110918639	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	4	-9.7119
chr5	136598033	136598071	protein_coding	Polr2j	exon	ENSMUSG00000039771	ProperStrand	3	chr16	23110907	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-9.5778
chr16	94651024	94651118	protein_coding	Ttc3	exon	ENSMUSG00000040785	ProperStrand	47	chr5	140917759	140918088	protein_coding	Eif3b	exon	ENSMUSG00000056076	ProperStrand	66	1	-13.6153
chr4	133574127	133574143	protein_coding	Lin28a	exon	ENSMUSG00000050966	ProperStrand	55	chr8	127557682	127557756	protein_coding	Tsnax	utr3	ENSMUSG00000056820	ProperStrand	5	1	-18.1663
chr12	76360462	76360479	LINE	L1MB7	L1	chr12L1MB776360383	ProperStrand	1	chr15	82980086	82980192	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-inf
chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	chr8	72856620	72856943	protein_coding	Upf1	exon	ENSMUSG00000058301	ProperStrand	90	1	-7.3706
chr17	88049849	88049898	protein_coding	Epcam	utr3	ENSMUSG00000045394	ProperStrand	43	chr2	26494708	26494748	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-6.3046
chr17	39979944	39980044	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr11	34138152	34138168	protein_coding	Dock2	exon	ENSMUSG00000020143	NonProperStrand	31	4	-18.9501
chr12	32232317	32232333	protein_coding	Slc26a4	intron	ENSMUSG00000020651	ProperStrand	7	chr7	108979562	108979900	protein_coding	Inppl1	exon	ENSMUSG00000032737	ProperStrand	272	1	-14.7191
chr19	6261807	6261824	protein_coding	Atg2a	exon	ENSMUSG00000024773	ProperStrand	97	chr11	3884251	3884390	protein_coding	Gal3st1	intron	ENSMUSG00000049721	ProperStrand	2	1	-inf
chr2	119160601	119160617	protein_coding	Dll4	utr3	ENSMUSG00000027314	ProperStrand	6	chr4	131866249	131866281	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-8.2891
chr2	90235315	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	70175913	70175931	protein_coding	Myo3b	intron	ENSMUSG00000042064	ProperStrand	8	1	-8.5166
chr6	33337865	33337907	protein_coding	Exoc4	intron	ENSMUSG00000029763	ProperStrand	120	chr16	23111464	23111505	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-1.8261
chr6	119693464	119693484	protein_coding	Erc1	exon	ENSMUSG00000030172	ProperStrand	69	chr1	162965980	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-3.3465
chr5	141090405	141090422	protein_coding	Lfng	exon	ENSMUSG00000029570	NonProperStrand	92	chr11	87240290	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	1	-10.1320
chr1	76759054	76759134	LINE	L1Md_F2	L1	chr1L1Md_F276758148	ProperStrand	1	chr14	34780585	34780675	protein_coding	Zfp488	utr3	ENSMUSG00000044519	NonProperStrand	39	1	-inf
chr2	77023627	77023643	protein_coding	Sestd1	utr3	ENSMUSG00000042272	NonProperStrand	10	chr7	116664816	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-5.9693
chr11	29446764	29446783	protein_coding	Rps27a	exon	ENSMUSG00000020460	ProperStrand	47	chrX	34622954	34623024	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-3.6184
chr19	26892704	26892722	processed_transcript	4931403E22Rik	.	ENSMUSG00000093772	ProperStrand	1	chr11	6519810	6519944	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-inf
chr4	34615978	34615997	protein_coding	Slc35a1	intron	ENSMUSG00000028293	ProperStrand	9	chr2	144087383	144087451	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	2	-16.5472
chr16	98284291	98284371	LINE	L1_Mus1	L1	chr16L1_Mus198283327	ProperStrand	23	chr8	75992711	75992801	LINE	L1Md_F2	L1	chr8L1Md_F275992095	ProperStrand	1	1	-inf
chr5	107066937	107067037	protein_coding	Zfp644	exon	ENSMUSG00000049606	ProperStrand	35	chr7	117166824	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-5.8692
chr16	55967217	55967267	protein_coding	Rpl24	exon	ENSMUSG00000022601	ProperStrand	149	chr5	130300458	130300548	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.1153
chr13	6557103	6557447	protein_coding	Pitrm1	exon	ENSMUSG00000021193	ProperStrand	28	chr4	131908689	131908789	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.4067
chr3	146093937	146094037	protein_coding	Ssx2ip	exon	ENSMUSG00000036825	ProperStrand	19	chr7	51505507	51505570	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	1	-11.1093
chr14	63309132	63309152	protein_coding	Ints6	intron	ENSMUSG00000035161	ProperStrand	11	chr16	23110909	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.6241
chr2	143768096	143768169	protein_coding	Dstn	utr3	ENSMUSG00000015932	ProperStrand	22	chrX	148367534	148367624	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	1	-11.0948
chr17	35381154	35381203	protein_coding	Ddx39b	exon	ENSMUSG00000019432	ProperStrand	119	chr11	69481376	69481466	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	3	-5.5497
chr5	115940328	115940407	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	chr1	162965984	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	3	-1.4046
chr13	59738651	59738668	protein_coding	Golm1	utr3	ENSMUSG00000021556	NonProperStrand	12	chr7	129245245	129245340	protein_coding	Ndufab1	utr5	ENSMUSG00000030869	ProperStrand	11	1	-19.9991
chr16	94897237	94897291	protein_coding	Dyrk1a	intron	ENSMUSG00000022897	ProperStrand	17	chr19	46022236	46022252	protein_coding	9130011E15Rik	intron	ENSMUSG00000039901	ProperStrand	129	1	-14.3422
chr17	29237214	29237314	protein_coding	Cdkn1a	utr3	ENSMUSG00000023067	ProperStrand	25	chr1	162965558	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.9342
chr3	65184222	65185939	protein_coding	Ssr3	utr3	ENSMUSG00000027828	ProperStrand	24	chr16	23110967	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.6072
chr6	41140347	41140437	LTR	MTEb-int	MaLR	chr6MTEb-int41140320	ProperStrand	1	chr6	41140475	41140555	LTR	MTEb	MaLR	chr6MTEb41140495	NonProperStrand	1	1	-inf
chr7	58702972	58702988	LINE	Lx8	L1	chr7Lx858702645	ProperStrand	6	chr14	76247725	76247776	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-8.8306
chr5	69964623	69964640	protein_coding-noncoding	Guf1	utr5	ENSMUSG00000029208	ProperStrand	11	chr2	12899913	12899973	protein_coding	Pter	exon	ENSMUSG00000026730	ProperStrand	2	1	-inf
chr6	129628834	129628851	protein_coding	Klrc1	exon	ENSMUSG00000030167	NonProperStrand	49	chr2	130102053	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-5.7531
chr16	52669738	52669818	LINE	L1Md_A	L1	chr16L1Md_A52667705	ProperStrand	1	chr11	102797795	102797885	lincRNA	Gm17536	intron	ENSMUSG00000091056	ProperStrand	15	1	-inf
chr11	3426352	3426368	protein_coding	Smtn	exon	ENSMUSG00000020439	ProperStrand	222	chr15	58770906	58770942	protein_coding	Ndufb9	exon	ENSMUSG00000022354	ProperStrand	13	1	-13.8039
chr13	9833563	9833652	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr4	79648847	79648885	pseudogene	Gm11407	.	ENSMUSG00000082179	NonProperStrand	20	1	-7.1311
chr2	120872244	120872260	protein_coding	Tgm5	exon	ENSMUSG00000053675	NonProperStrand	163	chr11	6428121	6428155	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.5312
chr18	38607409	38607436	protein_coding	Ndfip1	exon	ENSMUSG00000024425	ProperStrand	42	chr8	124409821	124410195	protein_coding	Slc7a5	exon	ENSMUSG00000040010	ProperStrand	166	1	-11.9915
chr10	98464118	98465783	protein_coding	Atp2b1	exon	ENSMUSG00000019943	ProperStrand	31	chr1	162966024	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-4.8589
chr17	33966736	33975118	protein_coding	Ndufa7	exon	ENSMUSG00000041881	ProperStrand	64	chr4	131908356	131908409	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-2.5339
chr11	5180669	5180685	protein_coding	Znrf3	utr3	ENSMUSG00000041961	NonProperStrand	210	chr1	162967513	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-1.3900
chr5	115842091	115842171	antisense	Gm13832	.	ENSMUSG00000087292	NonProperStrand	3	chr5	74489581	74489671	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	2	-16.6596
chr13	73651307	73651397	protein_coding	Lpcat1	exon	ENSMUSG00000021608	ProperStrand	42	chr12	112779148	112779228	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-5.4695
chr11	77313277	77313851	protein_coding	Git1	exon	ENSMUSG00000011877	ProperStrand	95	chr4	49225697	49225714	protein_coding	E130309F12Rik	intron	ENSMUSG00000063446	NonProperStrand	8	2	-19.2294
chr3	19511895	19528550	protein_coding	1700064H15Rik	intron	ENSMUSG00000082766	NonProperStrand	78	chr1	89673664	89673764	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	2	-4.8657
chr18	6131511	6131611	protein_coding	Arhgap12	intron	ENSMUSG00000041225	ProperStrand	25	chr9	15119704	15119968	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.2372
chr2	158184097	158184192	snoRNA	ENSMUSG00000064995_SNORA71	.	ENSMUSG00000064995	ProperStrand	430	chr2	26494708	26494802	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	6	-4.4672
chr9	91862179	91862198	LINE	L1Md_F2	L1	chr9L1Md_F291861985	ProperStrand	1	chr13	38592862	38592897	protein_coding	Txndc5	utr3	ENSMUSG00000038991	ProperStrand	48	1	-inf
chr19	5940900	5940990	protein_coding	Pola2	exon	ENSMUSG00000024833	ProperStrand	29	chr11	97643008	97643088	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.7822
chr5	125509095	125509112	protein_coding	Ncor2	exon	ENSMUSG00000029478	NonProperStrand	20	chr9	97648282	97648299	protein_coding	Clstn2	intron	ENSMUSG00000032452	ProperStrand	21	1	-17.4428
chr5	144087706	144087786	protein_coding-noncoding	Zdhhc4	utr3	ENSMUSG00000001844	NonProperStrand	1	chr5	144087860	144087950	protein_coding	Zdhhc4	utr5	ENSMUSG00000001844	NonProperStrand	14	1	-inf
chr4	151730301	151730737	protein_coding	Chd5	exon	ENSMUSG00000005045	NonProperStrand	147	chr2	25421638	25421656	protein_coding	Mamdc4	exon	ENSMUSG00000026941	ProperStrand	11	1	-14.9816
chr7	116901846	116901862	protein_coding	Nrip3	utr3	ENSMUSG00000034825	ProperStrand	1	chr18	75161534	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-inf
chr10	81632308	81632370	LTR	ORR1C1	MaLR	chr10ORR1C181632218	ProperStrand	2	chr17	32083383	32083410	protein_coding	Hsf2bp	utr3	ENSMUSG00000002076	ProperStrand	17	2	-inf
chrX	46846644	46846661	protein_coding	Arhgap36	intron	ENSMUSG00000036198	NonProperStrand	3	chr19	59064714	59064732	protein_coding	4930506M07Rik	exon	ENSMUSG00000041362	ProperStrand	36	1	-inf
chr12	111881336	111881436	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr7	117166824	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-0.8568
chr9	57253860	57253877	SINE	B1_Mm	Alu	chr9B1_Mm57253847	ProperStrand	39	chr14	76247711	76247840	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-4.9994
chr4	43505656	43505781	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr1	191058375	191058393	protein_coding	Kcnk2	intron	ENSMUSG00000037624	ProperStrand	56	1	-3.1947
chr4	43505793	43505883	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr3	33967961	33967977	protein_coding	Fxr1	utr3	ENSMUSG00000027680	ProperStrand	58	1	-3.1313
chr5	108924949	108928683	protein_coding	Pcgf3	exon	ENSMUSG00000033623	ProperStrand	17	chr11	116704533	116704549	protein_coding	Jmjd6	utr5	ENSMUSG00000056962	ProperStrand	92	1	-15.0321
chr19	4607678	4609891	protein_coding	Pcx	exon	ENSMUSG00000024892	ProperStrand	70	chr16	23110454	23110521	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-3.9412
chr7	30948058	30948089	protein_coding	Zfp146	utr5	ENSMUSG00000037029	ProperStrand	6	chr7	52382752	52382826	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	4	-18.5595
chr11	120487413	120487545	protein_coding	Mafg	utr3	ENSMUSG00000051510	ProperStrand	23	chr11	77873094	77873111	protein_coding	Flot2	utr3	ENSMUSG00000061981	NonProperStrand	1	1	-inf
chr14	54859749	54859767	protein_coding	Dad1	utr3	ENSMUSG00000022174	ProperStrand	11	chr16	23111449	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.1830
chr8	74906615	74906665	protein_coding	Eps15l1	exon	ENSMUSG00000006276	ProperStrand	42	chr2	158182180	158182280	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-5.6990
chr3	97817679	97851651	protein_coding	Notch2	exon	ENSMUSG00000027878	ProperStrand	86	chr2	164461589	164461606	protein_coding	Wfdc16	intron	ENSMUSG00000070530	ProperStrand	15	1	-15.4156
chr15	98350181	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	chr15	71624744	71624799	snoRNA	ENSMUSG00000088895_SNORA81	.	ENSMUSG00000088895	ProperStrand	348	2	-3.0531
chr5	44123670	44125067	protein_coding	Cc2d2a	exon	ENSMUSG00000039765	ProperStrand	2	chr16	23110936	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chrX	100451946	100451986	protein_coding	4930519F16Rik	utr5	ENSMUSG00000031325	ProperStrand	2	chr5	74489640	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-11.1084
chr5	134525128	134525146	SINE	B4	B4	chr5B4134524934	ProperStrand	3	chr18	35888329	35888346	protein_coding	1700066B19Rik	exon	ENSMUSG00000073598	NonProperStrand	14	1	-inf
chr10	86167137	86168122	protein_coding	Hsp90b1	utr5	ENSMUSG00000020048	ProperStrand	396	chr5	138608547	138608609	protein_coding	Mcm7	exon	ENSMUSG00000029730	ProperStrand	258	7	-inf
chr11	102294588	102294613	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr4	148550801	148550891	protein_coding	Kif1b	utr3	ENSMUSG00000063077	ProperStrand	60	7	-inf
chr7	126974786	126974876	protein_coding	2610020H08Rik	intron	ENSMUSG00000030924	ProperStrand	9	chr17	13115662	13115742	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	1	-11.4094
chr2	104430694	104430774	protein_coding	Cstf3	utr5	ENSMUSG00000027176	ProperStrand	19	chr7	116663675	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.6387
chr9	120039565	120039678	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	chr4	116828379	116828451	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	8	-4.6183
chr11	102294589	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr10	80644140	80644343	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-2.0294
chr1	88247743	88247766	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	chr8	113362445	113362488	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	1	-1.5234
chr1	122237194	122237211	protein_coding	C1ql2	utr5	ENSMUSG00000036907	NonProperStrand	9	chr5	108336362	108336490	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-8.7031
chr17	23957338	23957392	protein_coding	Srrm2	utr3	ENSMUSG00000039218	ProperStrand	521	chr2	22444824	22444846	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	2	-6.0755
mmu-miR-6238	2	20	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr15	57978221	57978297	snoRNA	ENSMUSG00000080461_SNORA11	.	ENSMUSG00000080461	ProperStrand	171	5	-19.1866
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr14	77424372	77424388	protein_coding	9030625A04Rik	utr3	ENSMUSG00000044350	NonProperStrand	152	3	-7.1155
chr2	157119950	157120991	protein_coding	Rpn2	exon	ENSMUSG00000027642	ProperStrand	363	chr18	75160711	75160739	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	1	-5.6221
chr9	111127261	111127280	protein_coding	Lrrfip2	utr3	ENSMUSG00000032497	ProperStrand	28	chr16	11144158	11144230	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	1	-12.0006
chr6	67222927	67227766	protein_coding	Serbp1	exon	ENSMUSG00000036371	ProperStrand	261	chr7	118219573	118219652	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-1.6199
chr5	31372943	31374251	protein_coding	Cad	exon	ENSMUSG00000013629	ProperStrand	260	chr8	97772867	97772883	protein_coding	Cngb1	exon	ENSMUSG00000031789	NonProperStrand	17	1	-12.9354
chr14	24347599	24347615	protein_coding	Kcnma1	exon	ENSMUSG00000063142	NonProperStrand	104	chr11	6428030	6428087	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.2360
chr11	4783766	4784087	protein_coding	Nipsnap1	exon	ENSMUSG00000034285	ProperStrand	15	chr19	8800385	8800475	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-6.2234
chr4	118107359	118107459	protein_coding	Cdc20	exon	ENSMUSG00000006398	ProperStrand	43	chr16	23110525	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.0458
chr4	133422289	133423113	protein_coding	Rps6ka1	exon	ENSMUSG00000003644	ProperStrand	68	chr16	23110459	23110495	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	4	-8.3464
chr10	90584782	90586378	protein_coding	Slc25a3	exon	ENSMUSG00000061904	ProperStrand	74	chr1	162965553	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.8998
chr6	91938204	91938294	protein_coding	Fgd5	exon	ENSMUSG00000034037	ProperStrand	38	chr13	23627383	23627463	protein_coding	Hist1h3g	exon	ENSMUSG00000062417	ProperStrand	25	1	-15.9952
chr9	78326822	78326845	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr2	153050783	153050799	protein_coding	Tspyl3	exon	ENSMUSG00000074671	ProperStrand	228	1	-3.7648
chr10	70073235	70073251	protein_coding	Phyhipl	intron	ENSMUSG00000037747	ProperStrand	8	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.4974
chr11	87048231	87048331	protein_coding	Ppm1e	intron	ENSMUSG00000046442	NonProperStrand	5	chr16	23110966	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr4	45000187	45000204	protein_coding	Grhpr	exon	ENSMUSG00000035637	ProperStrand	35	chr2	26493388	26493488	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-4.7678
chrX	160347488	160347504	protein_coding	Ap1s2	intron	ENSMUSG00000031367	ProperStrand	52	chrX	84483699	84483716	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-8.5357
chr15	76735259	76736309	protein_coding	Rpl8	exon	ENSMUSG00000003970	ProperStrand	191	chr16	23111404	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-1.4025
chr11	119207004	119207020	protein_coding	Sgsh	utr3	ENSMUSG00000005043	ProperStrand	67	chr5	121658860	121658928	protein_coding	Rpl6	exon	ENSMUSG00000029614	ProperStrand	332	1	-9.6638
chr10	82654273	82654315	protein_coding	Chst11	exon	ENSMUSG00000034612	ProperStrand	170	chr17	35299548	35299642	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-2.8470
chr3	153574609	153574649	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	chr1	162965981	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	4	-3.8255
chr15	12315897	12331250	protein_coding	Pdzd2	exon	ENSMUSG00000022197	ProperStrand	21	chr4	131908689	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-5.1004
chr5	23983903	23985486	protein_coding	Agap3	exon	ENSMUSG00000023353	ProperStrand	39	chr1	16635557	16635580	protein_coding	Tceb1	intron	ENSMUSG00000079658	NonProperStrand	1	1	-inf
chr2	33875938	33875956	lincRNA	C230014O12Rik	exon	ENSMUSG00000087461	NonProperStrand	9	chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	1	-11.9908
chr13	12505661	12505805	protein_coding	Heatr1	exon	ENSMUSG00000050244	ProperStrand	74	chr5	130295415	130295505	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	8	-inf
chr11	121358310	121358385	protein_coding	Tbcd	exon	ENSMUSG00000039230	ProperStrand	34	chr18	35714219	35716834	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.5127
chr3	85448965	85456213	protein_coding	Pet112l	exon	ENSMUSG00000028085	ProperStrand	81	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-8.3259
chr14	15572355	15572371	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr16	37384897	37384913	protein_coding	Stxbp5l	utr5	ENSMUSG00000022829	ProperStrand	332	1	-7.8634
chr15	76497984	76498064	protein_coding	Kifc2	utr3	ENSMUSG00000004187	NonProperStrand	9	chr15	76499856	76499946	protein_coding	Foxh1	intron	ENSMUSG00000033837	ProperStrand	3	2	-inf
chr5	34976626	34976660	protein_coding	Mfsd10	exon	ENSMUSG00000001082	ProperStrand	38	chr2	158182155	158182278	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-5.8964
chr7	34999530	34999620	protein_coding	Gpi1	intron	ENSMUSG00000036427	ProperStrand	288	chr9	15119337	15119417	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-2.2415
chr17	13115656	13115746	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	chr12	110874223	110874290	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	1	-4.2850
chr4	64785559	64785576	protein_coding	Pappa	utr5	ENSMUSG00000028370	ProperStrand	65	chr10	110918603	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-5.6549
chr7	29136055	29137396	protein_coding	Rps16	intron	ENSMUSG00000037563	ProperStrand	191	chr4	131908236	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-1.0467
chr19	46080183	46080199	protein_coding	Hps6	exon	ENSMUSG00000074811	NonProperStrand	45	chr9	65219979	65220008	protein_coding	Gm514	intron	ENSMUSG00000086228	ProperStrand	8	1	-17.8161
chr11	22900941	22901435	protein_coding	Cct4	exon	ENSMUSG00000007739	ProperStrand	81	chr9	120039540	120039630	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.7818
chr11	68252542	68252632	protein_coding	Pik3r5	intron	ENSMUSG00000020901	ProperStrand	8	chr13	51743580	51743660	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-10.9793
chr9	94419439	94419455	protein_coding	1190002N15Rik	utr3	ENSMUSG00000045414	ProperStrand	8	chr7	108440949	108440967	protein_coding	Atg16l2	intron	ENSMUSG00000047767	ProperStrand	121	1	-15.9940
chr5	121731105	121731817	protein_coding	Gm15800	exon	ENSMUSG00000042744	ProperStrand	47	chr17	24857740	24857830	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	3	-7.0886
chr6	131315415	131338172	protein_coding	Csda	utr3	ENSMUSG00000030189	ProperStrand	86	chr16	23110829	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	9	-5.8813
chr6	71086920	71086958	protein_coding	Thnsl2	intron	ENSMUSG00000054474	ProperStrand	2	chr16	23110968	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-inf
chr19	8867667	8867757	protein_coding	Polr2g	utr3	ENSMUSG00000071662	ProperStrand	7	chr16	23111372	23111444	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-5.0992
chr8	89368116	89368164	protein_coding	N4bp1	utr3	ENSMUSG00000031652	ProperStrand	98	chr2	130101991	130102081	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	6	-19.2668
chr6	124885357	124885426	protein_coding	Mlf2	exon	ENSMUSG00000030120	ProperStrand	80	chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-5.2802
chr11	102416321	102416338	protein_coding	Gpatch8	intron	ENSMUSG00000034621	NonProperStrand	17	chr1	173393741	173393776	protein_coding	F11r	utr3	ENSMUSG00000038235	ProperStrand	9	1	-19.7748
chr4	147385125	147385141	protein_coding	Clcn6	exon	ENSMUSG00000029016	ProperStrand	120	chr5	130300419	130300477	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.4114
chrX	44548000	44548019	LTR	ORR1E-int	MaLR	chrXORR1E-int44547613	NonProperStrand	2	chr6	86971222	86971325	protein_coding	Nfu1	intron	ENSMUSG00000029993	ProperStrand	12	2	-inf
chr1	187119557	187120303	protein_coding	Iars2	exon	ENSMUSG00000026618	ProperStrand	68	chr16	23111452	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.0916
chr9	30965404	30968936	protein_coding	Aplp2	exon	ENSMUSG00000031996	ProperStrand	172	chr5	130300463	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-1.8651
chr7	125265444	125265538	protein_coding	Arl6ip1	exon	ENSMUSG00000030654	ProperStrand	57	chr11	62417001	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-6.1443
chr1	12657929	12658009	lincRNA	Gm17644	exon	ENSMUSG00000066918	NonProperStrand	37	chr3	76280547	76280637	protein_coding	Fstl5	intron	ENSMUSG00000034098	NonProperStrand	4	1	-18.9976
chr6	118720631	118720683	protein_coding	Cacna1c	intron	ENSMUSG00000051331	NonProperStrand	49	chr10	23505175	23505265	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-4.4709
chr16	37134571	37134588	protein_coding	Stxbp5l	exon	ENSMUSG00000022829	ProperStrand	332	chr9	59518361	59518461	protein_coding	Pkm2	exon	ENSMUSG00000032294	NonProperStrand	18	1	-12.3278
chr2	104562191	104562208	protein_coding	Depdc7	exon	ENSMUSG00000027173	ProperStrand	1	chr5	121655016	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-inf
chr6	97112810	97112832	snoRNA	ENSMUSG00000065728_SNORA36	.	ENSMUSG00000065728	ProperStrand	158	chr15	34370660	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-1.8774
chr4	100449817	100449835	protein_coding	Cachd1	exon	ENSMUSG00000028532	NonProperStrand	18	chr17	24857716	24857775	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.5014
chr2	73701268	73701288	protein_coding	Atf2	utr5	ENSMUSG00000027104	ProperStrand	37	chr14	70776592	70776655	protein_coding	Piwil2	exon	ENSMUSG00000033644	ProperStrand	36	1	-15.3142
chr2	90895216	90895632	protein_coding	Psmc3	exon	ENSMUSG00000002102	ProperStrand	8	chr7	67125761	67125830	snoRNA	ENSMUSG00000089375_Snord107	.	ENSMUSG00000089375	ProperStrand	451	6	-19.9134
chr8	83312812	83312889	protein_coding	Gab1	exon	ENSMUSG00000031714	ProperStrand	72	chr11	62418049	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-5.2018
chr5	111164585	111168324	protein_coding	Ep400	exon	ENSMUSG00000029505	ProperStrand	176	chr16	11144168	11144258	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	1	-8.3066
chr11	106092470	106092494	protein_coding	Ddx42	exon	ENSMUSG00000020705	ProperStrand	26	chr1	177830221	177830353	protein_coding	Exo1	intron	ENSMUSG00000039748	ProperStrand	27	1	-16.6084
chr7	29136552	29136632	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	chr6	125071756	125071846	snoRNA	ENSMUSG00000088208_SCARNA11	.	ENSMUSG00000088208	ProperStrand	113	1	-1.3754
chr9	108239269	108239353	protein_coding	Rhoa	utr3	ENSMUSG00000007815	ProperStrand	45	chr2	130101259	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-7.1632
chr2	120352772	120352817	protein_coding	Zfp106	exon	ENSMUSG00000027288	ProperStrand	199	chr16	23110480	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-0.7350
chr1	187144729	187144820	protein_coding	Iars2	exon	ENSMUSG00000026618	ProperStrand	68	chr9	120038563	120038643	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	12	-19.5314
chr13	97945925	97945943	protein_coding	Gfm2	utr3	ENSMUSG00000021666	ProperStrand	26	chr16	11144096	11144227	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	2	-18.6157
chr8	11618057	11619169	protein_coding	Ankrd10	exon	ENSMUSG00000031508	ProperStrand	32	chr10	23505151	23505228	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-3.9487
chr5	87765651	87765670	protein_coding	Ugt2a3	exon	ENSMUSG00000035780	NonProperStrand	4	chr1	162968237	162968288	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-12.4736
chr15	102844825	102844841	protein_coding	Hoxc5	exon	ENSMUSG00000022485	ProperStrand	40	chr2	158182245	158182291	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-5.7951
chr2	127083459	127083551	protein_coding	Tmem127	utr3	ENSMUSG00000034850	ProperStrand	6	chr16	23110911	23110991	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.7876
chr3	33973704	33973781	protein_coding	Dnajc19	intron	ENSMUSG00000027679	NonProperStrand	4	chr7	148634715	148634805	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-9.5448
chr17	30772308	30772324	protein_coding	Dnahc8	utr5	ENSMUSG00000033826	ProperStrand	246	chr18	73693170	73693186	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-2.8774
chrX	148864510	148864527	LINE	L1_Mus4	L1	chrXL1_Mus4148863654	ProperStrand	6	chr1	136225761	136225779	protein_coding	Ppfia4	exon	ENSMUSG00000026458	ProperStrand	45	1	-18.1260
chr7	4088308	4088331	lincRNA	D030047H15Rik	exon	ENSMUSG00000085886	ProperStrand	5	chr19	4613413	4613492	protein_coding	Lrfn4	exon	ENSMUSG00000045045	ProperStrand	19	1	-19.2987
chr2	27954905	27954923	lincRNA	F730016J06Rik	intron	ENSMUSG00000086425	NonProperStrand	21	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-7.2845
chr13	99629896	99634428	protein_coding	Tnpo1	exon	ENSMUSG00000009470	ProperStrand	56	chr10	23505152	23505236	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-5.7205
chr5	24214813	24214874	protein_coding	Nub1	exon	ENSMUSG00000028954	ProperStrand	32	chr17	24857748	24857838	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-5.8398
chr11	102845864	102845880	lincRNA	Gm17536	intron	ENSMUSG00000091056	ProperStrand	15	chr6	51413464	51414128	protein_coding	Hnrnpa2b1	exon	ENSMUSG00000004980	ProperStrand	166	1	-14.0911
chr2	90235299	90235346	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	3	-4.1353
chr8	77633601	77633691	protein_coding	Mcm5	utr5	ENSMUSG00000005410	ProperStrand	199	chr11	69483194	69483274	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-0.7274
chr11	80634779	80634869	protein_coding	Tmem98	exon	ENSMUSG00000035413	ProperStrand	1	chr11	69481350	69481432	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-inf
chr13	95856366	95856384	protein_coding	Pde8b	intron	ENSMUSG00000021684	ProperStrand	43	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-7.2540
mmu-miR-6238	2	19	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr9	15119308	15119428	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	4	-9.0856
chr9	15119967	15119993	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	chr13	49779749	49779804	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-1.4765
chr7	105241602	105241702	protein_coding	Myo7a	intron	ENSMUSG00000030761	NonProperStrand	33	chr10	23505146	23505247	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-10.6407
chr13	41013661	41013740	protein_coding	Gcnt2	exon	ENSMUSG00000021360	ProperStrand	31	chr7	51505853	51505909	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	1	-9.9455
chr9	54560627	54560643	protein_coding	Dnaja4	intron	ENSMUSG00000032285	ProperStrand	8	chr11	34935156	34935172	protein_coding	Slit3	exon	ENSMUSG00000056427	NonProperStrand	45	1	-17.8233
chr17	78600422	78637082	protein_coding	Crim1	exon	ENSMUSG00000024074	ProperStrand	19	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.7782
chr12	74646643	74646662	protein_coding	Tmem30b	exon	ENSMUSG00000034435	ProperStrand	6	chr5	92485086	92485125	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	1	-13.4964
chr1	122499451	122499467	protein_coding	En1	utr5	ENSMUSG00000058665	NonProperStrand	1	chr1	162965531	162965554	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-inf
chr3	95749912	95750012	protein_coding	Anp32e	utr3	ENSMUSG00000015749	NonProperStrand	5	chr9	59519869	59523432	protein_coding	Pkm2	exon	ENSMUSG00000032294	NonProperStrand	18	4	-19.5984
chr8	87370650	87370729	protein_coding	Calr	utr5	ENSMUSG00000003814	ProperStrand	232	chr7	133435525	133435589	protein_coding	Sbk1	exon	ENSMUSG00000042978	ProperStrand	24	1	-12.4562
chr8	13174609	13174656	protein_coding	Lamp1	utr3	ENSMUSG00000031447	ProperStrand	92	chr3	123210852	123210889	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-4.1848
chr11	116535464	116535508	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr10	30530986	30531020	tRNA	tRNA81-GluCTC	.	874486	ProperStrand	154	2	-6.8548
chr11	120208380	120208470	protein_coding	Actg1	exon	ENSMUSG00000062825	ProperStrand	178	chr11	69483193	69483273	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-2.8317
chr15	79908957	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	chr11	106874216	106874248	tRNA	tRNA945-ArgCCG	.	1181232	ProperStrand	133	2	-6.6331
chr10	122217001	122217018	protein_coding	Ppm1h	intron	ENSMUSG00000034613	ProperStrand	51	chr1	162965980	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-3.9062
chr10	35142587	35142605	LINE	L1MDa	L1	chr10L1MDa35142473	ProperStrand	2	chr7	116663713	116663762	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-9.6916
chr12	110918198	110918221	snoRNA	ENSMUSG00000065749_AF357428	.	ENSMUSG00000065749	ProperStrand	218	chr1	89681253	89681353	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-3.0153
chr2	24823052	24823091	protein_coding	Wdr85	intron	ENSMUSG00000026975	ProperStrand	323	chr15	79908961	79909020	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	3	-6.2693
chr5	104283007	104283024	protein_coding	Aff1	utr3	ENSMUSG00000029313	ProperStrand	82	chr9	120039244	120039297	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	1	-8.8973
chr2	73434618	73434634	antisense	Gm13704	.	ENSMUSG00000086544	NonProperStrand	53	chr11	100210410	100210490	protein_coding	Hap1	utr3	ENSMUSG00000006930	ProperStrand	21	1	-15.6623
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr7	150717314	150717368	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-1.3521
chr12	60141322	60141447	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	chr4	122968584	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	2	-1.5018
chr2	162761285	162761380	protein_coding	Srsf6	utr3	ENSMUSG00000016921	ProperStrand	30	chr2	22444791	22444813	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-9.1700
chr2	117745918	117745937	lincRNA	Gm13986	intron	ENSMUSG00000087203	NonProperStrand	3	chr4	131866155	131866245	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-9.8903
chr5	30589038	30589094	protein_coding	Ept1	intron	ENSMUSG00000075703	ProperStrand	18	chr16	23110916	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7867
chr11	69481436	69481458	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	chr7	88674740	88674814	snoRNA	ENSMUSG00000093107_AC167122.1	.	ENSMUSG00000093107	ProperStrand	110	1	-2.1512
chr1	158574612	158574692	protein_coding	Abl2	utr3	ENSMUSG00000026596	ProperStrand	37	chr8	12837981	12842881	protein_coding	Atp11a	exon	ENSMUSG00000031441	ProperStrand	635	1	-9.5655
chr11	120653171	120653211	protein_coding	Dus1l	exon	ENSMUSG00000025155	ProperStrand	24	chr11	69483136	69483210	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-6.9436
chrX	98860049	98860066	protein_coding	Ogt	exon	ENSMUSG00000034160	ProperStrand	49	chr11	6428088	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-6.0625
chr14	107169610	107169700	LINE	L1Md_F2	L1	chr14L1Md_F2107169254	NonProperStrand	1	chr5	30387191	30387281	protein_coding	Tyms	utr3	ENSMUSG00000025747	ProperStrand	8	1	-inf
chr17	35379629	35379699	protein_coding	Ddx39b	utr5	ENSMUSG00000019432	ProperStrand	119	chr13	9621213	9621232	protein_coding	Dip2c	exon	ENSMUSG00000048264	ProperStrand	27	2	-19.2241
chr4	117811479	117814990	protein_coding	Kdm4a	exon	ENSMUSG00000033326	ProperStrand	81	chrX	131341159	131341179	protein_coding	Armcx2	exon	ENSMUSG00000033436	ProperStrand	12	1	-16.0118
chr1	130245882	130245932	protein_coding	Mcm6	exon	ENSMUSG00000026355	ProperStrand	69	chr7	116664819	116664924	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	4	-8.5121
chr13	74494656	74494674	protein_coding	Ccdc127	utr3	ENSMUSG00000021578	NonProperStrand	54	chr9	120038613	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	3	-8.1595
chr7	114653568	114653591	protein_coding	Syt9	intron	ENSMUSG00000062542	ProperStrand	14	chr10	23505149	23505220	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-6.3221
chr2	135498372	135498474	protein_coding	Plcb4	intron	ENSMUSG00000039943	ProperStrand	50	chr4	131865857	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	8	-18.3716
chr4	53015201	53015217	SINE	B1F1	Alu	chr4B1F153015138	ProperStrand	102	chr14	118915811	118915828	protein_coding	Abcc4	intron	ENSMUSG00000032849	NonProperStrand	24	1	-14.1026
chr4	116827118	116827162	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	chr13	96100552	96100652	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	1	-2.1324
chr12	53094903	53094965	protein_coding	6530401N04Rik	intron	ENSMUSG00000020956	ProperStrand	11	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-15.3351
chr10	126954471	126954551	protein_coding	Shmt2	utr3	ENSMUSG00000025403	ProperStrand	94	chr18	74938037	74938127	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	ProperStrand	1022	1	-6.7561
chr2	119120471	119120523	protein_coding	Vps18	exon	ENSMUSG00000034216	ProperStrand	21	chr12	81492597	81492665	snoRNA	ENSMUSG00000088158_Scarna3b	.	ENSMUSG00000088158	ProperStrand	147	1	-13.6435
chr14	76906809	76906930	protein_coding	Tsc22d1	utr3	ENSMUSG00000022010	ProperStrand	86	chr1	131913804	131913822	protein_coding	Thsd7b	intron	ENSMUSG00000042581	NonProperStrand	18	3	-19.0751
chr13	111128613	111128630	LTR	RLTR10	ERVK	chr13RLTR10111128168	ProperStrand	2	chr4	131865855	131865914	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-8.7800
chr9	111292573	111292589	protein_coding	Trank1	exon	ENSMUSG00000062296	ProperStrand	7	chr9	65049532	65049610	snRNA	ENSMUSG00000075930_U5	.	ENSMUSG00000075930	ProperStrand	175	2	-19.6650
chr11	79706242	79706260	LINE	Lx4B	L1	chr11Lx4B79706198	ProperStrand	1	chr11	97641452	97641535	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	1	-inf
chr12	111930907	111930960	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr17	13115682	13115780	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	1	-2.7148
chr9	120039533	120039682	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	chr7	67123693	67123753	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	2	-1.1591
chr3	88130528	88131806	protein_coding	0610031J06Rik	exon	ENSMUSG00000001418	ProperStrand	9	chr14	21327843	21327864	protein_coding	Ppp3cb	exon	ENSMUSG00000021816	ProperStrand	17	1	-19.3679
chr2	127041816	127041835	protein_coding	Snrnp200	exon	ENSMUSG00000003660	ProperStrand	203	chr4	118108153	118108243	protein_coding	Cdc20	exon	ENSMUSG00000006398	ProperStrand	43	1	-11.5408
chr7	109273739	109273829	protein_coding	Nup98	exon	ENSMUSG00000063550	ProperStrand	100	chr11	97642992	97643072	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-3.0487
chr4	86500610	86500632	protein_coding	Rps6	exon	ENSMUSG00000028495	NonProperStrand	3	chr9	120039566	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	NonProperStrand	24	1	-inf
chr12	85838291	85838336	protein_coding	Lin52	intron	ENSMUSG00000085793	ProperStrand	5	chr2	158182190	158182280	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-10.1046
chrX	160347488	160347504	protein_coding	Ap1s2	intron	ENSMUSG00000031367	ProperStrand	52	chr2	22444791	22444819	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-8.0627
chr11	77666884	77667286	protein_coding	Myo18a	exon	ENSMUSG00000000631	ProperStrand	124	chr12	102281110	102281176	protein_coding	Smek1	intron	ENSMUSG00000041846	ProperStrand	66	4	-inf
chr2	29925997	29926069	protein_coding	Set	exon	ENSMUSG00000054766	ProperStrand	167	chr11	69483133	69483211	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-0.9279
chr4	149989252	149989298	protein_coding	Rere	exon	ENSMUSG00000039852	ProperStrand	76	chr1	39605590	39605690	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-6.8740
chr7	99814557	99814584	protein_coding	Pcf11	intron	ENSMUSG00000041328	ProperStrand	27	chr17	13112566	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-6.1426
chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	chr6	71444109	71444130	protein_coding	Rnf103	utr5	ENSMUSG00000052656	NonProperStrand	11	1	-11.6370
chr3	153575134	153575168	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	chr9	103401280	103401296	protein_coding	Tmem108	exon	ENSMUSG00000042757	NonProperStrand	323	1	-5.1745
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr2	41199972	41199989	protein_coding	Lrp1b	exon	ENSMUSG00000049252	ProperStrand	376	1	-5.7309
chr12	104076603	104076632	protein_coding	Btbd7	exon	ENSMUSG00000041702	ProperStrand	3	chr12	112779190	112779223	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-11.0699
chr17	28454148	28454454	protein_coding	Fance	utr5	ENSMUSG00000007570	ProperStrand	23	chr15	5068428	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	7	-20.0300
chr10	76532227	76533706	protein_coding	Col18a1	exon	ENSMUSG00000001435	ProperStrand	287	chr6	114260511	114260527	protein_coding	Slc6a1	exon	ENSMUSG00000030310	NonProperStrand	147	1	-8.3827
chr10	99922844	99922969	protein_coding	Tmtc3	intron	ENSMUSG00000036676	ProperStrand	53	chr5	108334221	108334246	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	4	-15.7279
chr1	153203309	153206775	protein_coding	Ivns1abp	utr3	ENSMUSG00000023150	ProperStrand	51	chr9	120038553	120038643	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.3330
chr5	50450101	50450118	protein_coding	Gpr125	utr5	ENSMUSG00000029090	NonProperStrand	25	chr3	123210930	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.6093
chr8	48973728	48973744	protein_coding	Wwc2	intron	ENSMUSG00000031563	NonProperStrand	56	chr11	6428060	6428124	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.3176
chr7	52381972	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	3	-2.7813
chr5	66045309	66046044	protein_coding	Pds5a	exon	ENSMUSG00000029202	ProperStrand	62	chr4	131908236	131908344	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-4.1127
chr7	91040968	91044040	protein_coding	Mesdc2	exon	ENSMUSG00000038503	ProperStrand	19	chr9	64143736	64143826	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	3	-inf
chr9	78023109	78023148	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr15	89201636	89201763	protein_coding	Ncaph2	exon	ENSMUSG00000008690	ProperStrand	65	4	-17.3362
chr7	53172451	53172541	protein_coding	Tmem143	utr3	ENSMUSG00000002781	ProperStrand	9	chr4	131908692	131908772	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.5343
chr5	31374392	31374432	protein_coding	Cad	exon	ENSMUSG00000013629	ProperStrand	260	chr8	85388124	85388140	protein_coding	Rnf150	exon	ENSMUSG00000047747	ProperStrand	8	1	-14.5133
chr9	106621991	106622691	protein_coding	Rad54l2	exon	ENSMUSG00000040661	ProperStrand	51	chr18	33954900	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-3.8071
chr11	50039191	50044196	protein_coding	Mgat4b	exon	ENSMUSG00000036620	ProperStrand	10	chr16	23110525	23110579	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.8693
chr7	133592210	133592226	protein_coding	Atp2a1	exon	ENSMUSG00000030730	ProperStrand	49	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.0906
chr5	3620662	3620762	protein_coding	Pex1	exon	ENSMUSG00000005907	ProperStrand	11	chr16	23111796	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.0138
chr17	14831119	14831136	protein_coding	Thbs2	utr5	ENSMUSG00000023885	ProperStrand	5	chr2	32050013	32050403	protein_coding	Prrc2b	exon	ENSMUSG00000039262	ProperStrand	344	1	-14.9714
chr16	33242588	33242660	protein_coding	Osbpl11	utr3	ENSMUSG00000022807	ProperStrand	31	chr15	34370545	34370607	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	8	-19.4878
chr9	7821215	7821252	protein_coding	Birc2	intron	ENSMUSG00000057367	ProperStrand	12	chr7	148634701	148634783	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	4	-inf
chr4	43505657	43505721	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr3	103766705	103766721	protein_coding	Rsbn1	utr3	ENSMUSG00000044098	NonProperStrand	17	1	-5.4753
chr3	137819933	137819968	protein_coding	Rg9mtd2	utr3	ENSMUSG00000004127	ProperStrand	3	chr7	148634786	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-10.2358
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr12	112779184	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	6	-12.8740
chr11	116535950	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr1	59761672	59761716	snoRNA	ENSMUSG00000089093_Snord11	.	ENSMUSG00000089093	ProperStrand	193	1	-3.6733
chr1	129596369	129596386	Unknown	YREP_Mm	Unknown	chr1YREP_Mm129596326	NonProperStrand	1	chr7	13516163	13516213	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	1	-inf
chr17	25001157	25001215	protein_coding	Hagh	exon	ENSMUSG00000024158	ProperStrand	10	chr6	42274461	42274478	protein_coding	Fam131b	utr5	ENSMUSG00000029861	ProperStrand	6	2	-19.5995
chr15	79517803	79517840	protein_coding	Josd1	utr5	ENSMUSG00000022426	ProperStrand	13	chr10	23505559	23505627	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-10.6548
chr11	15212155	15212171	LINE	Lx	L1	chr11Lx15211662	ProperStrand	54	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.9337
chr15	88540654	88540744	protein_coding	Brd1	intron	ENSMUSG00000022387	NonProperStrand	7	chr10	110918549	110918629	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-7.7211
chr2	29882557	29882647	protein_coding	Spna2	exon	ENSMUSG00000057738	ProperStrand	222	chr8	73419695	73419775	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-1.0585
chr6	83318070	83318086	protein_coding	Tet3	exon	ENSMUSG00000034832	NonProperStrand	93	chr4	131865855	131865961	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-2.2125
chr4	32367943	32367960	protein_coding	Bach2	intron	ENSMUSG00000040270	NonProperStrand	16	chr15	79654442	79654459	protein_coding	Cbx6	utr3	ENSMUSG00000089715	NonProperStrand	11	1	-18.9924
chrX	139346735	139346752	protein_coding	Ammecr1	exon	ENSMUSG00000042225	ProperStrand	4	chr11	97642952	97643019	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-13.0857
chr9	71829113	71829137	protein_coding	Tcf12	intron	ENSMUSG00000032228	NonProperStrand	3	chr17	24856622	24856722	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	2	-inf
chr5	77342800	77342859	protein_coding	Ppat	utr3	ENSMUSG00000029246	ProperStrand	55	chr16	17210492	17210512	protein_coding	Rimbp3	exon	ENSMUSG00000071636	ProperStrand	67	1	-13.2656
chrX	148705862	148705962	protein_coding	Kdm5c	exon	ENSMUSG00000025332	ProperStrand	139	chr5	130295533	130295551	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-3.6512
chr15	85889273	85889291	protein_coding	Gramd4	utr5	ENSMUSG00000035900	ProperStrand	39	chr3	68889034	68889134	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-4.0569
chr16	90224667	90225459	protein_coding	Sod1	exon	ENSMUSG00000022982	ProperStrand	75	chr11	69483190	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-5.6869
chr4	153394230	153394269	protein_coding	Lrrc47	utr3	ENSMUSG00000029028	ProperStrand	30	chr5	147646818	147646850	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	1	-9.3529
chr18	36957983	36958030	protein_coding	Zmat2	utr3	ENSMUSG00000001383	ProperStrand	25	chr7	116664794	116664884	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	9	-inf
chr1	90123798	90124639	protein_coding	Heatr7b1	utr5	ENSMUSG00000079429	ProperStrand	147	chr5	108336363	108336408	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-5.4876
chr13	94268257	94268274	protein_coding	Jmy	exon	ENSMUSG00000021690	ProperStrand	16	chr1	127491938	127491955	protein_coding	Slc35f5	utr3	ENSMUSG00000026342	ProperStrand	70	1	-15.6894
chr5	26470066	26470156	LINE	L1Md_F3	L1	chr5L1Md_F326470010	ProperStrand	1	chr2	54872295	54872385	protein_coding	Galnt13	intron	ENSMUSG00000060988	ProperStrand	45	1	-inf
chr15	73582033	73582113	protein_coding	Ptp4a3	utr5	ENSMUSG00000059895	ProperStrand	45	chr3	68889051	68889141	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-3.7874
chr15	36525687	36525792	protein_coding	Pabpc1	utr3	ENSMUSG00000022283	ProperStrand	908	chr3	152450608	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	2	-5.9684
chr1	167806155	167807127	protein_coding	Pou2f1	utr3	ENSMUSG00000026565	ProperStrand	34	chr16	23110971	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.8174
chr8	13416895	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr11	68886927	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	10	-3.2053
chr5	115836130	115836210	antisense	Gm13832	.	ENSMUSG00000087292	NonProperStrand	3	chr5	128538707	128538797	protein_coding	Tmem132d	intron	ENSMUSG00000034310	ProperStrand	20	1	-inf
chr2	113953271	113953355	protein_coding	Aqr	exon	ENSMUSG00000040383	ProperStrand	70	chr4	131908687	131908746	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.0215
chr2	121261685	121262141	protein_coding	Pdia3	exon	ENSMUSG00000027248	ProperStrand	74	chr11	97642952	97643003	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.1210
chr15	83335943	83335962	protein_coding	Ttll1	utr5	ENSMUSG00000022442	ProperStrand	11	chr4	131908752	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.1344
chr2	60588729	60588752	protein_coding	Rbms1	utr3	ENSMUSG00000026970	ProperStrand	26	chr18	33954845	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	5	-19.8866
chr3	62283320	62283380	protein_coding	Dhx36	intron	ENSMUSG00000027770	ProperStrand	16	chr11	119966667	119966712	protein_coding	Slc38a10	exon	ENSMUSG00000061306	ProperStrand	91	1	-15.1585
chr1	84757592	84757692	protein_coding	Trip12	exon	ENSMUSG00000026219	ProperStrand	248	chr15	34370545	34370603	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-1.2164
chr4	21838605	21838621	protein_coding	Coq3	utr3	ENSMUSG00000028247	ProperStrand	10	chr8	73419657	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-6.6208
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr8	86775506	86775523	protein_coding	Mri1	exon	ENSMUSG00000004996	ProperStrand	9	1	-11.6738
chr4	100810392	100811724	protein_coding	Raver2	exon	ENSMUSG00000035275	ProperStrand	16	chrX	34622930	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-5.7063
chrX	147503447	147503501	protein_coding	Fgd1	exon	ENSMUSG00000025265	ProperStrand	96	chr16	23110555	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-3.1347
chr19	7350595	7350615	protein_coding	Mark2	utr3	ENSMUSG00000024969	NonProperStrand	9	chr8	73419713	73419775	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-6.8403
chrX	6015241	6015318	protein_coding	Shroom4	intron	ENSMUSG00000068270	ProperStrand	22	chr7	117190024	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-5.2455
chr14	75724697	75724715	protein_coding	Zc3h13	intron	ENSMUSG00000022000	ProperStrand	42	chr4	131908356	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.9630
chr5	122691914	122691930	protein_coding	Hvcn1	utr3	ENSMUSG00000064267	ProperStrand	182	chr2	32818884	32818941	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-3.3673
chr1	45488603	45488620	protein_coding	Col5a2	intron	ENSMUSG00000026042	ProperStrand	184	chr4	118807014	118807071	protein_coding	Slc2a1	exon	ENSMUSG00000028645	ProperStrand	361	1	-7.4810
chr19	3896058	3896158	protein_coding	Tcirg1	utr3	ENSMUSG00000001750	ProperStrand	77	chr7	133633896	133633937	protein_coding	Tufm	utr3	ENSMUSG00000073838	ProperStrand	28	2	-19.6130
chr2	90235293	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	143007910	143007930	protein_coding	5730419I09Rik	intron	ENSMUSG00000030279	ProperStrand	81	1	-3.8951
chr12	109460710	109460726	protein_coding	Ccdc85c	intron	ENSMUSG00000084883	ProperStrand	157	chr2	32818883	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-3.6378
chr8	72334599	72334615	protein_coding	Gmip	exon	ENSMUSG00000036246	ProperStrand	102	chr16	87419165	87419199	snoRNA	ENSMUSG00000065647_SNORA2	.	ENSMUSG00000065647	ProperStrand	123	1	-10.8058
chr15	82725599	82725637	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	chr10	107800751	107800851	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	1	-3.4320
chr2	120360375	120360469	protein_coding	Zfp106	exon	ENSMUSG00000027288	ProperStrand	199	chr18	73693114	73693134	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-3.2553
chr19	5801151	5801271	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr10	90581049	90581173	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	2	-0.8331
chr9	21548752	21548768	protein_coding	Ldlr	exon	ENSMUSG00000032193	NonProperStrand	39	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.0770
chr8	37401782	37401800	LINE	L1MC1	L1	chr8L1MC137401479	ProperStrand	11	chr5	136707644	136707661	protein_coding	Sh2b2	exon	ENSMUSG00000005057	NonProperStrand	101	1	-15.7321
chr9	108849485	108849734	protein_coding	Uqcrc1	exon	ENSMUSG00000025651	ProperStrand	43	chr1	162965981	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-7.0852
chr11	80415108	80415125	protein_coding	Myo1d	exon	ENSMUSG00000035441	ProperStrand	144	chr5	111121151	111121201	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-4.7275
chr7	20228400	20228442	protein_coding	Clptm1	exon	ENSMUSG00000002981	ProperStrand	109	chr18	75161567	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-6.0228
chr5	48573011	48573028	protein_coding	Slit2	intron	ENSMUSG00000031558	ProperStrand	5	chr11	6520386	6520442	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	1	-12.8742
chr18	10052129	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr5	108336363	108336495	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	3	-3.3057
chr4	151163383	151163449	protein_coding	Camta1	intron	ENSMUSG00000014592	ProperStrand	170	chr9	120038613	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	4	-5.6991
chr16	23110454	23110491	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	chr11	68876540	68876571	tRNA	tRNA1821-SerGCT	.	237606	ProperStrand	39	2	-5.5465
chr2	71724746	71738630	protein_coding	Pdk1	utr3	ENSMUSG00000006494	ProperStrand	37	chr4	131865859	131865965	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-4.5263
chr2	90235299	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr3	69345956	69345973	protein_coding	Ppm1l	intron	ENSMUSG00000027784	ProperStrand	32	2	-9.3066
chr14	61113419	61113436	LINE	L1MB3	L1	chr14L1MB361113375	NonProperStrand	72	chr15	88613055	88613142	protein_coding	Zbed4	exon	ENSMUSG00000034333	ProperStrand	19	1	-15.2784
chr13	14711630	14713020	protein_coding	Psma2	exon	ENSMUSG00000015671	ProperStrand	26	chr4	131908811	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	18	-inf
chr1	133827813	133827914	protein_coding	Nucks1	utr3	ENSMUSG00000026434	ProperStrand	59	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	4	-21.8214
chr14	27736863	27736912	protein_coding	Appl1	utr3	ENSMUSG00000040760	ProperStrand	42	chr12	106269445	106269484	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-4.8231
chr7	148140807	148140885	protein_coding	Ifitm2	utr3	ENSMUSG00000060591	ProperStrand	25	chr7	116663715	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.1077
chr2	130102033	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	chr8	34802341	34802416	snoRNA	ENSMUSG00000088856_SNORA48	.	ENSMUSG00000088856	ProperStrand	236	1	-2.7988
chr6	125606742	125606762	protein_coding	Vwf	exon	ENSMUSG00000001930	NonProperStrand	7	chr7	17425922	17425975	protein_coding	Strn4	utr3	ENSMUSG00000030374	ProperStrand	12	1	-21.2490
chr1	88423337	88423361	protein_coding	Ptma	utr5	ENSMUSG00000026238	ProperStrand	385	chr13	107697802	107697923	protein_coding	Ipo11	intron	ENSMUSG00000042590	ProperStrand	120	1	-8.2030
chr12	111931048	111932385	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr7	116663636	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	12	-4.8870
chr1	95262266	95262348	protein_coding	Ppp1r7	utr3	ENSMUSG00000026275	ProperStrand	44	chr4	131865930	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.2687
chr7	108982168	108982197	protein_coding	Inppl1	exon	ENSMUSG00000032737	ProperStrand	272	chr1	74744016	74744037	protein_coding	Ttll4	exon	ENSMUSG00000033257	ProperStrand	24	1	-12.1383
chr6	124428333	124428445	LTR	MLT1F1	MaLR	chr6MLT1F1124428234	ProperStrand	7	chr10	23505151	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	7	-inf
chr15	99843090	99843147	protein_coding	Larp4	utr3	ENSMUSG00000023025	ProperStrand	41	chr1	173217898	173217915	protein_coding	Usp21	utr5	ENSMUSG00000053483	NonProperStrand	20	2	-inf
chr11	97643003	97643094	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	NonProperStrand	10	chr11	69483247	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	NonProperStrand	35	1	-18.2018
chr1	138122170	138122187	protein_coding	5730559C18Rik	intron	ENSMUSG00000041605	NonProperStrand	22	chr3	123210900	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-6.5416
chr13	74480801	74480823	protein_coding	Sdha	exon	ENSMUSG00000021577	ProperStrand	70	chr9	44445620	44445687	protein_coding	Ddx6	utr3	ENSMUSG00000032097	ProperStrand	59	3	-19.8726
chr18	62685808	62685898	protein_coding	Fbxo38	exon	ENSMUSG00000042211	ProperStrand	18	chr11	69481347	69481427	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.5024
chr3	89212504	89212539	protein_coding	Flad1	exon	ENSMUSG00000042642	ProperStrand	7	chr4	122968617	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-10.6781
chr4	43505689	43505779	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr19	3875467	3875534	protein_coding-noncoding	Chka	utr5	ENSMUSG00000024843	ProperStrand	6	1	-7.6381
chr3	96969885	96970077	protein_coding	Acp6	exon	ENSMUSG00000028093	ProperStrand	19	chr7	26029271	26029351	protein_coding	Erf	exon	ENSMUSG00000040857	ProperStrand	20	5	-inf
chr7	148634663	148636939	protein_coding	Rplp2	exon	ENSMUSG00000025508	ProperStrand	106	chr2	54965336	54965352	protein_coding	Galnt13	exon	ENSMUSG00000060988	ProperStrand	45	1	-12.7506
chr11	78087976	78088066	protein_coding	2610507B11Rik	exon	ENSMUSG00000010277	ProperStrand	246	chr2	26494720	26494800	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-0.9155
chr12	87008398	87008478	LTR	RLTR11B	ERVK	chr12RLTR11B87008404	NonProperStrand	1	chr12	87008251	87008341	SINE	B1_Mus1	Alu	chr12B1_Mus187008269	NonProperStrand	1	1	-inf
chr16	14618620	14618638	protein_coding	A630010A05Rik	exon	ENSMUSG00000075395	ProperStrand	6	chr1	39605591	39605650	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	2	-20.1187
chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	chr2	130103751	130103811	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-2.4208
chr11	62418013	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	chr8	73419654	73419781	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	26	-4.6544
chrX	71140225	71140280	protein_coding	Arhgap4	exon	ENSMUSG00000031389	ProperStrand	6	chr7	29136543	29136635	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	4	-18.9352
chr1	39902173	39902514	LINE	L2b	L2	chr1L2b39902159	NonProperStrand	28	chr3	53281694	53281745	protein_coding	2810046L04Rik	utr3	ENSMUSG00000049504	ProperStrand	15	1	-17.5143
chr5	131434081	131434099	protein_coding	Wbscr17	intron	ENSMUSG00000034040	ProperStrand	13	chr16	10659767	10659833	protein_coding	Clec16a	intron	ENSMUSG00000068663	ProperStrand	24	1	-18.3408
chr10	75943739	75943775	protein_coding	Mcm3ap	intron	ENSMUSG00000001150	ProperStrand	95	chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	1	-7.6753
chr5	151331032	151331090	protein_coding	Brca2	intron	ENSMUSG00000041147	ProperStrand	75	chr10	23505152	23505228	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-1.8898
chr1	177091739	177091756	protein_coding	Rgs7	intron	ENSMUSG00000026527	NonProperStrand	12	chr12	77074346	77074394	protein_coding	Syne2	exon	ENSMUSG00000063450	ProperStrand	63	1	-16.5001
chr6	117858150	117858214	protein_coding	Hnrnpf	intron	ENSMUSG00000042079	ProperStrand	147	chr1	9932550	9932579	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-5.9563
chr6	33282381	33297799	protein_coding	Exoc4	exon	ENSMUSG00000029763	ProperStrand	120	chr4	116827120	116827176	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	3	-13.1297
chr11	115655474	115655636	protein_coding	2310067B10Rik	exon	ENSMUSG00000020747	ProperStrand	74	chr11	77995191	77995231	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-5.7703
chr4	123493022	123493040	protein_coding	Rhbdl2	intron	ENSMUSG00000043333	NonProperStrand	2	chr13	96100585	96100685	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	1	-15.5348
chr11	62366306	62366406	protein_coding	Ubb	exon	ENSMUSG00000019505	ProperStrand	32	chr17	35803798	35803815	protein_coding	Vars2	exon	ENSMUSG00000038838	NonProperStrand	1	1	-inf
chr3	119485654	119485671	protein_coding	Ptbp2	intron	ENSMUSG00000028134	NonProperStrand	1	chr18	35716791	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-inf
chr17	44238108	44238125	protein_coding	Enpp4	intron	ENSMUSG00000023961	NonProperStrand	11	chr13	29043802	29043854	protein_coding	Sox4	exon	ENSMUSG00000076431	ProperStrand	73	1	-16.3360
chr5	123321903	123328519	protein_coding	Kdm2b	exon	ENSMUSG00000029475	ProperStrand	30	chr10	39978417	39978485	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-6.8311
chr16	98284281	98284361	LINE	L1_Mus1	L1	chr16L1_Mus198283327	NonProperStrand	3	chr7	49102087	49102177	protein_coding	Vmn2r58	intron	ENSMUSG00000090383	ProperStrand	1	1	-inf
chr19	53977884	53977900	protein_coding	Pdcd4	utr5	ENSMUSG00000024975	ProperStrand	21	chr15	7107177	7107232	protein_coding	Lifr	exon	ENSMUSG00000054263	ProperStrand	64	1	-15.3087
chr5	113302570	113302917	protein_coding	Myo18b	exon	ENSMUSG00000072720	ProperStrand	48	chr14	33005110	33005176	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-4.4169
chr3	151897803	151897840	protein_coding	Fubp1	utr3	ENSMUSG00000028034	ProperStrand	56	chr4	122968676	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	3	-14.6652
chr6	8186051	8186068	protein_coding	Mios	utr3	ENSMUSG00000042447	NonProperStrand	40	chr18	35714144	35714210	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.2014
chr5	82997483	82997571	LTR	RLTR31B_Mm	ERVK	chr5RLTR31B_Mm82997319	NonProperStrand	1	chr5	82997877	82997957	Other	RMER1A	Other	chr5RMER1A82997850	ProperStrand	1	1	-inf
chr16	23111367	23111458	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	NonProperStrand	38	chr12	106269366	106269446	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	NonProperStrand	38	1	-15.1663
chr18	35097989	35098043	protein_coding	Hspa9	exon	ENSMUSG00000024359	ProperStrand	166	chr16	23111696	23111786	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-2.1023
chr1	175363554	175363599	protein_coding	Aim2	intron	ENSMUSG00000037860	ProperStrand	16	chr17	50244364	50244381	protein_coding	Rftn1	intron	ENSMUSG00000039316	ProperStrand	11	1	-18.9924
chr17	79213445	79213467	protein_coding	Heatr5b	exon	ENSMUSG00000039414	ProperStrand	27	chr9	120037927	120038027	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-6.2721
chr17	31985049	31985587	protein_coding	Sik1	exon	ENSMUSG00000024042	ProperStrand	55	chr1	162966007	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-3.7649
chr6	92104375	92104391	protein_coding	Nr2c2	exon	ENSMUSG00000005893	ProperStrand	101	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-4.8545
chr8	96500061	96504250	protein_coding	Amfr	exon	ENSMUSG00000031751	ProperStrand	26	chr18	35716811	35716883	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-6.2275
chr5	143666109	143666139	protein_coding	Actb	exon	ENSMUSG00000029580	ProperStrand	446	chr7	87226148	87226238	protein_coding	Zfp710	exon	ENSMUSG00000048897	ProperStrand	229	3	-15.0560
chr16	55970271	55971506	protein_coding	Rpl24	utr3	ENSMUSG00000022601	ProperStrand	149	chr18	35714195	35714220	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-1.8783
chr1	155287317	155287355	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	chr11	48614383	48614435	snoRNA	ENSMUSG00000064500_SNORD95	.	ENSMUSG00000064500	ProperStrand	100	2	-12.7003
chr11	100414998	100415014	protein_coding	Ttc25	exon	ENSMUSG00000006784	NonProperStrand	119	chr11	48617750	48617786	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	1	-8.4263
chr17	49093366	49093447	protein_coding	Lrfn2	intron	ENSMUSG00000040490	NonProperStrand	9	chr18	73693171	73693187	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-9.3669
chr16	74826642	74826722	SINE	B1_Mus1	Alu	chr16B1_Mus174826619	NonProperStrand	1	chr8	108702341	108702431	protein_coding	Slc7a6	intron	ENSMUSG00000031904	ProperStrand	22	1	-inf
chr2	31815274	31815374	protein_coding	Aif1l	intron	ENSMUSG00000001864	ProperStrand	4	chr11	78079971	78080140	protein_coding	2610507B11Rik	exon	ENSMUSG00000010277	ProperStrand	246	1	-16.1605
chr15	81871924	81871973	protein_coding	Nhp2l1	utr3	ENSMUSG00000063480	ProperStrand	40	chr11	6428077	6428157	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.9420
chr15	89200702	89200888	protein_coding	Ncaph2	exon	ENSMUSG00000008690	ProperStrand	65	chr4	131908236	131908344	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-5.6331
chr2	22444712	22444812	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	chr3	95980290	95980312	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-1.7530
chr4	41064493	41070317	protein_coding	Nol6	exon	ENSMUSG00000028430	ProperStrand	98	chr10	23505175	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-1.3620
chr14	55057856	55057872	protein_coding	Mmp14	exon	ENSMUSG00000000957	ProperStrand	61	chr11	117221951	117222002	protein_coding	Sept9	utr3	ENSMUSG00000059248	ProperStrand	60	1	-13.2829
chr4	43505767	43505847	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr17	46873751	46873841	protein_coding	Cnpy3	exon	ENSMUSG00000023973	ProperStrand	85	1	-2.4608
chr5	100855927	100855974	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr15	7140177	7140546	protein_coding	Lifr	exon	ENSMUSG00000054263	ProperStrand	64	1	-6.5100
chr4	43505781	43505861	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr13	114759097	114759187	protein_coding	Arl15	intron	ENSMUSG00000042348	ProperStrand	51	1	-3.3649
chr10	80968089	80968135	protein_coding	Gna15	intron	ENSMUSG00000034792	ProperStrand	5	chr16	23111464	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-5.8178
chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	chr9	116583939	116583956	protein_coding	Rbms3	intron	ENSMUSG00000039607	NonProperStrand	54	1	-8.3902
chr19	46107284	46107345	protein_coding	Ldb1	utr3	ENSMUSG00000025223	ProperStrand	42	chr15	98350165	98350202	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	3	-12.7468
chr6	24684480	24684497	protein_coding	Hyal6	exon	ENSMUSG00000029679	NonProperStrand	114	chr7	29136525	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-2.5850
chr8	63408000	63408052	protein_coding	Clcn3	exon	ENSMUSG00000004319	ProperStrand	93	chr2	158184092	158184192	snoRNA	ENSMUSG00000064995_SNORA71	.	ENSMUSG00000064995	ProperStrand	430	1	-8.4917
chr3	96405304	96405321	protein_coding	Lix1l	exon	ENSMUSG00000049288	ProperStrand	5	chr9	120038552	120038599	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-8.0049
chr19	43579408	43579425	protein_coding	Got1	intron	ENSMUSG00000025190	NonProperStrand	147	chr9	120039570	120039622	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.7929
chr2	129004103	129004121	antisense	AI847159	.	ENSMUSG00000084826	NonProperStrand	63	chr2	26493366	26493450	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-6.1925
chr18	64616832	64616849	protein_coding	Fech	utr3	ENSMUSG00000024588	ProperStrand	14	chr11	120819424	120819483	protein_coding	Slc16a3	utr3	ENSMUSG00000025161	ProperStrand	98	3	-inf
chr15	12802491	12802581	protein_coding	Drosha	intron	ENSMUSG00000022191	ProperStrand	163	chr15	82034961	82035038	protein_coding	Srebf2	utr3	ENSMUSG00000022463	ProperStrand	592	1	-6.7438
chr8	23138838	23138920	protein_coding	Atp7b	exon	ENSMUSG00000006567	ProperStrand	7	chr18	75161127	75161173	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	1	-13.4445
chr9	19462101	19462340	LINE	L1Md_A	L1	chr9L1Md_A19461964	NonProperStrand	28	chr14	34780768	34781004	protein_coding	Zfp488	utr3	ENSMUSG00000044519	ProperStrand	54	4	-20.8018
chrX	95836274	95836332	protein_coding	Ophn1	exon	ENSMUSG00000031214	ProperStrand	3	chr1	89673621	89673711	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-9.4507
chr5	118605343	118605376	protein_coding	Fbxw8	exon	ENSMUSG00000032867	ProperStrand	61	chr1	185857228	185857244	protein_coding	1700056E22Rik	exon	ENSMUSG00000044854	ProperStrand	173	1	-11.1553
chr18	54582045	54582062	lincRNA	9430076G02Rik	exon	ENSMUSG00000084814	ProperStrand	30	chr17	35087896	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	2	-10.6412
chr1	153318163	153318207	protein_coding	Rnf2	utr3	ENSMUSG00000026484	ProperStrand	13	chr1	162965980	162965998	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	3	-15.3055
chr2	130913431	130913447	LINE	L1MB4	L1	chr2L1MB4130913188	ProperStrand	5	chr2	172381650	172381667	protein_coding	Tfap2c	exon	ENSMUSG00000028640	ProperStrand	13	1	-19.9979
chr4	126241214	126242178	protein_coding	Clspn	exon	ENSMUSG00000042489	ProperStrand	89	chr9	15119632	15119712	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-5.4451
chr19	5134912	5134945	protein_coding	Pacs1	utr3	ENSMUSG00000024855	ProperStrand	24	chr7	116663670	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.1859
chr4	137212294	137212310	protein_coding	Usp48	utr3	ENSMUSG00000043411	ProperStrand	135	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-3.6699
chr9	123288470	123288487	protein_coding	Lars2	intron	ENSMUSG00000035202	NonProperStrand	4	chr17	95160909	95218242	protein_coding	2610044O15Rik	exon	ENSMUSG00000066057	NonProperStrand	70	1	-18.4375
chr17	85161252	85161309	protein_coding	Lrpprc	intron	ENSMUSG00000024120	ProperStrand	98	chr2	26767784	26767807	snoRNA	ENSMUSG00000064829_SNORD36	.	ENSMUSG00000064829	ProperStrand	98	1	-11.3415
chr5	139046998	139047015	protein_coding	Zfp68	utr3	ENSMUSG00000058291	ProperStrand	17	chr9	120039533	120039661	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	10	-inf
chr15	98604924	98606960	protein_coding	Wnt10b	exon	ENSMUSG00000022996	NonProperStrand	189	chr3	108357329	108357449	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-2.4498
chr1	37950837	37952184	protein_coding	Mrpl30	exon	ENSMUSG00000026087	ProperStrand	3	chr7	116663711	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-14.5479
chr4	53015201	53015217	SINE	B1F1	Alu	chr4B1F153015138	ProperStrand	102	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-4.1608
chr18	35105646	35106205	protein_coding	Hspa9	exon	ENSMUSG00000024359	ProperStrand	166	chr4	131866238	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-1.8988
chr16	21017757	21017837	SINE	B1_Mus2	Alu	chr16B1_Mus221017759	NonProperStrand	1	chr9	21622851	21622941	protein_coding	Dock6	intron	ENSMUSG00000032198	ProperStrand	155	1	-inf
chr2	129036903	129037003	protein_coding	Slc20a1	utr3	ENSMUSG00000027397	ProperStrand	81	chr7	52381973	52382016	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-6.1191
chr7	52381719	52381782	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	chr14	52829462	52829562	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	4	-9.4811
chr2	91771596	91771898	protein_coding	Mdk	utr5	ENSMUSG00000027239	ProperStrand	56	chr16	35022653	35025942	protein_coding	Ptplb	exon	ENSMUSG00000035376	ProperStrand	17	4	-20.3178
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr9	51890556	51890627	protein_coding	Rdx	exon	ENSMUSG00000032050	ProperStrand	60	2	-12.4647
chr10	79173634	79174254	protein_coding	Bsg	exon	ENSMUSG00000023175	ProperStrand	107	chr7	117166735	117166825	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-3.7205
chr9	105572240	105575017	protein_coding	Pik3r4	exon	ENSMUSG00000032571	ProperStrand	49	chr13	90238636	90238716	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	1	-9.0535
chr18	74096861	74096921	protein_coding	Mapk4	exon	ENSMUSG00000024558	ProperStrand	34	chr2	26494710	26494800	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.1609
chr6	55019404	55019449	protein_coding	Gars	exon	ENSMUSG00000029777	ProperStrand	71	chr8	13416896	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-6.1219
chr2	85397837	85397918	LINE	L1Md_T	L1	chr2L1Md_T85396816	ProperStrand	2	chr7	54442303	54442393	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	2	-inf
chr1	53379902	53379919	protein_coding	Osgepl1	intron	ENSMUSG00000026096	NonProperStrand	7	chr5	74489543	74489662	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	6	-19.8632
chr7	133527870	133527950	protein_coding	Nfatc2ip	utr3	ENSMUSG00000030722	ProperStrand	26	chr2	26493365	26493455	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	15	-24.6184
chr10	126533715	126533795	protein_coding	Os9	exon	ENSMUSG00000040462	ProperStrand	72	chr2	165750882	165750899	pseudogene	Gm11461	.	ENSMUSG00000083264	NonProperStrand	1	1	-inf
chr16	4213304	4213322	protein_coding	Crebbp	utr5	ENSMUSG00000022521	ProperStrand	56	chr2	158182180	158182278	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-5.1363
chr7	106627937	106628457	protein_coding	Rps3	exon	ENSMUSG00000030744	ProperStrand	159	chr2	84530865	84531297	protein_coding	Zdhhc5	exon	ENSMUSG00000034075	NonProperStrand	144	1	-9.6015
chr17	24869755	24869771	protein_coding	Rpl3l	utr5	ENSMUSG00000002500	NonProperStrand	56	chr16	20692525	20692545	protein_coding	Eif4g1	utr3	ENSMUSG00000045983	ProperStrand	199	1	-11.0472
chr6	119430499	119430589	protein_coding	Fbxl14	exon	ENSMUSG00000030019	ProperStrand	17	chr15	37932111	37932168	protein_coding	Ubr5	exon	ENSMUSG00000037487	ProperStrand	258	1	-12.9521
chr7	30074412	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr7	20530069	20530087	protein_coding	2210010C17Rik	exon	ENSMUSG00000040498	NonProperStrand	18	1	-12.8723
chr14	55514488	55514696	protein_coding	Pabpn1	exon	ENSMUSG00000022194	ProperStrand	22	chr15	72783443	72783472	protein_coding	Trappc9	exon	ENSMUSG00000047921	ProperStrand	44	1	-15.9989
chr11	64677843	64677933	LINE	L1MCa	L1	chr11L1MCa64677697	ProperStrand	1	chr11	64677550	64677630	SINE	B1F	Alu	chr11B1F64677558	NonProperStrand	1	1	-inf
chr3	30864848	30868302	protein_coding	Phc3	utr5	ENSMUSG00000037652	ProperStrand	32	chr12	106269396	106269445	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-5.3536
chr3	88715214	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-3.0850
chr18	73693119	73693190	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr11	106362302	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	6	-2.2431
chr11	87864839	87864863	protein_coding	Srsf1	utr3	ENSMUSG00000018379	ProperStrand	49	chr17	14033226	14035965	protein_coding	Mllt4	exon	ENSMUSG00000068036	ProperStrand	156	1	-11.8045
chr4	140266288	140266304	protein_coding	Rcc2	exon	ENSMUSG00000040945	ProperStrand	228	chr5	92485086	92485216	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	2	-9.8797
chr4	4594461	4594551	LINE	L1_Mus2	L1	chr4L1_Mus24594250	NonProperStrand	1	chr14	36123614	36123704	protein_coding	Grid1	intron	ENSMUSG00000041078	NonProperStrand	6	1	-inf
chr2	155649673	155649690	protein_coding	Eif6	exon	ENSMUSG00000027613	ProperStrand	42	chr8	73419713	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.7861
chr14	118776719	118776736	lincRNA	Gm17668	intron	ENSMUSG00000091690	NonProperStrand	8	chr9	64022855	64022887	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-12.1558
chr16	35932620	35932636	protein_coding	Dtx3l	exon	ENSMUSG00000049502	ProperStrand	152	chr6	71832629	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-3.8313
chr7	135123736	135124770	protein_coding	Fus	exon	ENSMUSG00000030795	ProperStrand	162	chr11	69481351	69481431	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-1.5470
chr19	5104997	5105087	protein_coding	Rab1b	intron	ENSMUSG00000024870	ProperStrand	133	chr8	107761372	107761459	protein_coding	D230025D16Rik	intron	ENSMUSG00000031889	ProperStrand	20	4	-20.2410
chr9	15123944	15123976	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	NonProperStrand	100	chr2	32818832	32818883	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	3	-10.7175
chr5	148113281	148113297	protein_coding	Cdx2	utr3	ENSMUSG00000029646	ProperStrand	276	chr6	38628200	38628218	protein_coding	Clec2l	intron	ENSMUSG00000079598	ProperStrand	2	1	-18.0422
chr17	88077661	88077677	protein_coding	Msh2	exon	ENSMUSG00000024151	ProperStrand	124	chr8	32260397	32260423	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-3.2725
chr17	15510855	15511656	protein_coding	Dll1	exon	ENSMUSG00000014773	ProperStrand	2	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr7	52713404	52714975	protein_coding	Ftl1	exon	ENSMUSG00000050708	ProperStrand	807	chr5	130300437	130300554	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	10	-2.8443
chr7	29686971	29704080	protein_coding	Actn4	exon	ENSMUSG00000054808	ProperStrand	120	chr8	73419657	73419759	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-3.5290
chr3	85942712	85942775	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	chr11	6520327	6520424	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	4	-13.4683
chr8	127971622	127971662	protein_coding	Sipa1l2	exon	ENSMUSG00000001995	ProperStrand	37	chr9	47369852	47369870	protein_coding	Cadm1	intron	ENSMUSG00000032076	ProperStrand	77	1	-13.7904
chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	chr5	74489575	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-0.7656
chr16	11222721	11222765	protein_coding	Gspt1	exon	ENSMUSG00000062203	ProperStrand	49	chr17	24857716	24857819	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-4.6398
chr2	34629900	34629921	protein_coding	Hspa5	exon	ENSMUSG00000026864	ProperStrand	181	chr1	145626120	145626193	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-6.6326
chr2	113952694	113952735	protein_coding	Aqr	exon	ENSMUSG00000040383	ProperStrand	70	chr4	131908236	131908293	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.2038
chr7	86596478	86596494	protein_coding	Polg	exon	ENSMUSG00000039176	ProperStrand	93	chr17	35960303	35960320	protein_coding	Flot1	utr5	ENSMUSG00000059714	ProperStrand	8	1	-16.4768
chr8	113244095	113244162	protein_coding	Vac14	utr3	ENSMUSG00000010936	ProperStrand	27	chr8	73419657	73419729	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.6289
chr9	20831579	20832602	protein_coding	Icam1	utr3	ENSMUSG00000037405	ProperStrand	44	chr7	29136546	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-7.4916
chr11	44377502	44377531	protein_coding	Rnf145	exon	ENSMUSG00000019189	ProperStrand	46	chr7	29136526	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.8242
chr16	45627798	45627817	protein_coding	BC016579	utr3	ENSMUSG00000033187	ProperStrand	13	chr4	112929378	112929396	protein_coding	Skint6	intron	ENSMUSG00000087194	NonProperStrand	35	1	-17.6473
chr7	150717298	150717348	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	chr14	52829459	52829551	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-1.0794
chr18	60934310	60936075	protein_coding	Rps14	utr5	ENSMUSG00000024608	ProperStrand	154	chr17	13116554	13117202	protein_coding	Tcp1	exon	ENSMUSG00000068039	ProperStrand	116	4	-20.4026
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	134097815	134097831	protein_coding	Etv6	intron	ENSMUSG00000030199	NonProperStrand	77	3	-9.7155
chr8	86656839	86656899	protein_coding	Cc2d1a	utr3	ENSMUSG00000036686	ProperStrand	18	chr18	73693108	73693138	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-7.9292
chr14	47808947	47808963	protein_coding	Gch1	utr5	ENSMUSG00000037580	NonProperStrand	31	chr15	34370545	34370619	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-7.9713
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr12	88778631	88778722	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	2	-2.7242
chrX	84483698	84483715	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chrX	93136011	93136027	protein_coding	Las1l	exon	ENSMUSG00000057421	ProperStrand	248	1	-5.4463
chr3	96218416	96218737	misc_RNA	Telomerase-vert	.	ENSMUSG00000064796	ProperStrand	443	chrX	34622906	34623007	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	5	-3.3605
chr6	113265522	113266589	protein_coding	Brpf1	exon	ENSMUSG00000001632	ProperStrand	23	chr7	117189896	117189976	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	6	-19.8747
chr13	104840853	104840869	protein_coding	Nln	exon	ENSMUSG00000021710	ProperStrand	47	chr11	117583879	117583979	protein_coding	Tnrc6c	exon	ENSMUSG00000025571	ProperStrand	51	1	-14.1433
chr2	121949511	121949528	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	chr4	149068239	149068257	protein_coding	Pik3cd	intron	ENSMUSG00000039936	ProperStrand	151	1	-8.4506
chr19	9046280	9046380	protein_coding	Eef1g	intron	ENSMUSG00000071644	ProperStrand	410	chr2	130101266	130101310	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-2.9384
chr5	107412589	107412650	protein_coding	Cdc7	utr3	ENSMUSG00000029283	NonProperStrand	6	chr7	29136571	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	NonProperStrand	27	3	-19.9403
chr7	52305066	52305166	protein_coding	Prr12	exon	ENSMUSG00000046574	ProperStrand	86	chr16	23111465	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.8055
chr6	114260511	114260527	protein_coding	Slc6a1	exon	ENSMUSG00000030310	NonProperStrand	147	chr11	69481389	69481462	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-1.6926
chr2	71588226	71588271	protein_coding	Itga6	intron	ENSMUSG00000027111	NonProperStrand	4	chr6	17831256	17831274	protein_coding	St7	intron	ENSMUSG00000029534	ProperStrand	2	1	-inf
chr16	20659848	20660091	protein_coding	Psmd2	exon	ENSMUSG00000006998	ProperStrand	99	chr7	148634753	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-3.0659
chr17	45705894	45705925	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr12	90586862	90586880	protein_coding	Nrxn3	exon	ENSMUSG00000066392	ProperStrand	17	1	-9.2722
chr2	31428391	31468612	protein_coding	Fubp3	exon	ENSMUSG00000026843	ProperStrand	35	chr16	23110832	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-4.3005
chr11	113005356	113005373	lincRNA	2610035D17Rik	intron	ENSMUSG00000087259	NonProperStrand	38	chr5	138070644	138074882	protein_coding	Lrch4	exon	ENSMUSG00000093445	ProperStrand	16	1	-16.9647
chr10	75157503	75157521	protein_coding	Cabin1	exon	ENSMUSG00000020196	ProperStrand	62	chr17	45769879	45770002	protein_coding	Capn11	exon	ENSMUSG00000058626	ProperStrand	19	1	-15.5871
chr19	41841918	41842046	protein_coding	Arhgap19	utr3	ENSMUSG00000025154	ProperStrand	34	chr13	51743690	51743708	protein_coding	Cks2	intron	ENSMUSG00000062248	ProperStrand	26	1	-16.1021
chr2	91619669	91619743	protein_coding	Ambra1	intron	ENSMUSG00000040506	ProperStrand	65	chr4	56910500	56910590	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-5.9492
chr19	40989686	40989762	protein_coding	Zfp518a	exon	ENSMUSG00000049164	ProperStrand	9	chr4	131908256	131908346	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.8019
chr19	37297494	37297584	SINE	B2_Mm1a	B2	chr19B2_Mm1a37297465	ProperStrand	1	chr1	55000623	55000703	SINE	B4A	B4	chr1B4A55000525	NonProperStrand	1	1	-inf
chr4	132049393	132049465	protein_coding	Sesn2	utr3	ENSMUSG00000028893	ProperStrand	75	chr11	97642987	97643077	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-3.7761
chr9	98480746	98480778	protein_coding	Copb2	exon	ENSMUSG00000032458	ProperStrand	33	chr8	125741087	125741105	protein_coding	4732415M23Rik	intron	ENSMUSG00000048478	ProperStrand	88	1	-13.7508
chrX	34337262	34337307	protein_coding	Slc25a5	exon	ENSMUSG00000016319	ProperStrand	55	chr16	23111777	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-5.6276
chr17	27559700	27559717	protein_coding	Grm4	utr3	ENSMUSG00000063239	ProperStrand	147	chr11	69483190	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	5	-6.5745
chr9	40097178	40097278	protein_coding	Scn3b	utr3	ENSMUSG00000049281	ProperStrand	13	chr19	8799844	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	6	-20.0876
chr2	104194182	104194200	protein_coding	D430041D05Rik	intron	ENSMUSG00000068373	NonProperStrand	6	chr11	69481388	69481443	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-7.7824
chr6	113383189	113383207	protein_coding	Cidec	exon	ENSMUSG00000030278	NonProperStrand	9	chr9	120037898	120038031	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	2	-13.7141
chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	chr9	15120931	15120986	snoRNA	ENSMUSG00000065265_SNORA32	.	ENSMUSG00000065265	ProperStrand	101	1	-8.4461
chr18	75855768	75855785	protein_coding	Ctif	intron	ENSMUSG00000052928	ProperStrand	41	chr18	35716810	35716865	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.8214
chr2	24825186	24827046	protein_coding	Wdr85	exon	ENSMUSG00000026975	ProperStrand	323	chrX	7733111	7733447	protein_coding	Tbc1d25	exon	ENSMUSG00000039201	ProperStrand	126	1	-8.4549
chr16	20716122	20716145	protein_coding	Clcn2	utr5	ENSMUSG00000022843	NonProperStrand	2	chr4	131865856	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-inf
chr13	21772358	21772448	LINE	Lx8	L1	chr13Lx821771765	ProperStrand	1	chr16	42757210	42757290	lincRNA	4932412D23Rik	intron	ENSMUSG00000075070	NonProperStrand	2	1	-inf
chr17	43910233	43910253	SINE	ID_B1	B4	chr17ID_B143910062	NonProperStrand	4	chr5	23676894	23676951	protein_coding	Nupl2	intron	ENSMUSG00000048439	ProperStrand	4	1	-inf
chr6	149284020	149284038	protein_coding	2810474O19Rik	utr3	ENSMUSG00000032712	ProperStrand	70	chr3	101182175	101182221	protein_coding	Igsf3	utr5	ENSMUSG00000042035	ProperStrand	73	3	-inf
chr14	122775198	122777098	protein_coding	Clybl	exon	ENSMUSG00000025545	ProperStrand	23	chr2	32818902	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-7.3770
chr2	129998641	129998659	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr17	39985566	39985666	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-1.3087
chr17	33195017	33195097	LINE	L1_Mur2	L1	chr17L1_Mur233195014	NonProperStrand	1	chr17	33195250	33195340	LTR	MTD	MaLR	chr17MTD33195153	NonProperStrand	1	1	-inf
chr6	11855212	11856069	protein_coding	Ndufa4	exon	ENSMUSG00000029632	ProperStrand	9	chr19	8800355	8800418	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-11.8480
chr9	41880350	41889881	protein_coding	Sorl1	exon	ENSMUSG00000049313	ProperStrand	112	chr12	60141411	60141491	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	7	-inf
chr18	77673434	77673457	protein_coding	Loxhd1	intron	ENSMUSG00000032818	NonProperStrand	5	chr11	6428103	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-8.1751
chr1	157072878	157072915	protein_coding	BC034090	exon	ENSMUSG00000033722	ProperStrand	3	chr8	13876098	13876176	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	3	-inf
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chrX	136145433	136145449	protein_coding	Rnf128	exon	ENSMUSG00000031438	NonProperStrand	9	1	-8.2671
chr3	61653828	61653847	LINE	L1M5	L1	chr3L1M561653584	NonProperStrand	1	chr7	116663634	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-inf
chr19	37359729	37359787	protein_coding	Ide	exon	ENSMUSG00000056999	ProperStrand	19	chr2	26494708	26494765	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.2936
chr1	102076759	102076793	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	chr9	64023228	64023286	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	1	-4.6407
chr15	102301041	102301121	lincRNA	Gm17403	intron	ENSMUSG00000090630	NonProperStrand	10	chr15	102301070	102301160	protein_coding	Pcbp2	utr5	ENSMUSG00000056851	ProperStrand	164	1	-14.9708
chr18	67591344	67593810	protein_coding	Afg3l2	exon	ENSMUSG00000024527	ProperStrand	43	chr11	6428039	6428119	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-6.4395
chr16	91270622	91270640	protein_coding	Olig1	exon	ENSMUSG00000046160	NonProperStrand	32	chr3	123210881	123210933	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.1535
chr12	81815536	81815553	protein_coding	3830431G21Rik	intron	ENSMUSG00000066438	ProperStrand	2	chr4	131865866	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-8.7800
chr5	136333034	136333053	protein_coding	Srrm3	utr3	ENSMUSG00000039860	ProperStrand	41	chr10	23505165	23505255	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-3.3013
chr2	120539797	120539831	protein_coding	Stard9	exon	ENSMUSG00000033705	ProperStrand	42	chr16	23111754	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.4934
chr13	23849190	23849207	protein_coding	Hist1h4b	utr3	ENSMUSG00000069266	ProperStrand	5	chr11	6428088	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-8.1751
chr11	20126842	20126858	protein_coding	Rab1	utr3	ENSMUSG00000020149	NonProperStrand	3	chr11	20128862	20128942	protein_coding	Cep68	utr3	ENSMUSG00000044066	ProperStrand	15	3	-inf
chr11	5681212	5681256	pseudogene	2210015D19Rik	.	ENSMUSG00000083844	ProperStrand	24	chr15	98350174	98350266	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	7	-21.1275
chr2	130102052	130102106	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	chr12	92811866	92812014	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	6	-8.9360
chr18	32405206	32405222	protein_coding	Ercc3	exon	ENSMUSG00000024382	ProperStrand	280	chr19	8800085	8800129	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-4.5917
chr13	51743571	51743661	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	chr4	56910508	56910588	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	5	-4.7114
chr7	13615047	13615079	protein_coding	Trim28	exon	ENSMUSG00000005566	ProperStrand	296	chr2	158185530	158185658	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	3	-8.5150
chr11	62216938	62216954	protein_coding	Ncor1	exon	ENSMUSG00000018501	ProperStrand	132	chr16	94688594	94689563	protein_coding	Ttc3	exon	ENSMUSG00000040785	ProperStrand	47	1	-12.2237
chr13	54653769	54653859	protein_coding	4833439L19Rik	utr3	ENSMUSG00000025871	ProperStrand	14	chr4	131908814	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.6665
chr7	148633572	148637136	protein_coding	Rplp2	exon	ENSMUSG00000025508	ProperStrand	106	chr2	26493406	26493498	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-4.7371
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr16	22572859	22572876	protein_coding	Dgkg	intron	ENSMUSG00000022861	NonProperStrand	39	1	-5.2962
chr15	95803551	95803567	protein_coding	Ano6	utr3	ENSMUSG00000064210	NonProperStrand	11	chr11	69483252	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-5.6603
chr3	41386766	41386782	protein_coding	Phf17	intron	ENSMUSG00000025764	NonProperStrand	6	chr4	137030235	137030266	protein_coding	Hspg2	intron	ENSMUSG00000028763	ProperStrand	812	1	-12.8577
chr2	31872734	31872834	protein_coding	Nup214	exon	ENSMUSG00000001855	ProperStrand	62	chr17	24665444	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-4.8773
chr3	8975926	8975942	protein_coding	Tpd52	intron	ENSMUSG00000027506	NonProperStrand	9	chr1	102076759	102076791	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	1	-13.3211
chr17	12426339	12426412	protein_coding	Map3k4	intron	ENSMUSG00000014426	ProperStrand	36	chr2	158451026	158451043	protein_coding	Actr5	exon	ENSMUSG00000037761	NonProperStrand	94	2	-20.1398
chr11	76409938	76410022	protein_coding	Abr	intron	ENSMUSG00000017631	ProperStrand	33	chr16	23110836	23110876	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.9284
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	2	-3.3169
chr4	131908687	131908898	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	chr19	8800084	8800147	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	19	-0.8684
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr2	91436230	91436337	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	2	-7.7075
chr18	36901775	36901841	protein_coding	Tmco6	utr3	ENSMUSG00000006850	ProperStrand	10	chr1	162966234	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-11.2304
chr5	146005232	146005322	protein_coding	Zfp655	exon	ENSMUSG00000007812	ProperStrand	5	chr17	24857752	24857832	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-7.1522
chr3	101961226	101961289	protein_coding	Vangl1	utr3	ENSMUSG00000027860	ProperStrand	25	chr8	98269961	98270061	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	4	-20.3491
chr1	127491938	127491955	protein_coding	Slc35f5	utr3	ENSMUSG00000026342	ProperStrand	70	chr4	131908236	131908273	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-2.3280
chr7	13511160	13511790	protein_coding	Rps5	exon	ENSMUSG00000012848	ProperStrand	108	chr12	60141446	60141508	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-5.6714
chr14	33107857	33107919	antisense	Gm17210	.	ENSMUSG00000090459	ProperStrand	2	chr9	62640905	62640943	protein_coding	Fem1b	utr3	ENSMUSG00000032244	ProperStrand	111	1	-19.3170
chrX	71517819	71517951	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	chr11	55296198	55296303	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	2	-1.1505
chr11	74469973	74470035	protein_coding	1300001I01Rik	exon	ENSMUSG00000020741	ProperStrand	76	chr1	162965985	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-3.1713
chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	chr18	73693171	73693187	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-1.5259
chr3	69528199	69528299	protein_coding	Nmd3	exon	ENSMUSG00000027787	ProperStrand	18	chr15	79913288	79913320	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-5.9221
chr2	126573995	126574085	protein_coding	Usp8	exon	ENSMUSG00000027363	ProperStrand	40	chr19	8800356	8800436	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-4.2913
chr7	31366683	31366736	protein_coding	Wbp7	exon	ENSMUSG00000006307	ProperStrand	180	chr7	104531206	104531524	protein_coding	Alg8	exon	ENSMUSG00000035704	ProperStrand	2	1	-19.3704
chr11	68936358	68936374	protein_coding	Hes7	exon	ENSMUSG00000023781	NonProperStrand	66	chr8	129468746	129468799	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-4.2324
chr14	54981103	54981145	protein_coding	Oxa1l	exon	ENSMUSG00000000959	ProperStrand	31	chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	1	-10.3966
chr13	59739814	59739860	protein_coding	Golm1	intron	ENSMUSG00000021556	ProperStrand	27	chr8	73419657	73419711	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-11.1252
chr6	90612275	90612312	protein_coding	Iqsec1	utr3	ENSMUSG00000034312	ProperStrand	23	chr10	41644311	41644329	protein_coding	Armc2	exon	ENSMUSG00000071324	ProperStrand	281	1	-12.1598
chr7	29135772	29135808	protein_coding	Rps16	utr5	ENSMUSG00000037563	ProperStrand	191	chr11	62418013	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-3.3605
chr11	70265787	70265877	protein_coding	Med11	intron	ENSMUSG00000018923	ProperStrand	3	chr14	27466037	27466117	protein_coding	Arf4	intron	ENSMUSG00000021877	ProperStrand	14	1	-inf
chr6	67222158	67222208	protein_coding	Serbp1	exon	ENSMUSG00000036371	ProperStrand	261	chr10	76480378	76480401	protein_coding	Gm10787	intron	ENSMUSG00000074919	NonProperStrand	1	1	-inf
chr19	37282358	37285224	protein_coding	March5	exon	ENSMUSG00000023307	ProperStrand	17	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-3.4874
chr16	57391645	57391782	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr2	26493366	26493441	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	NonProperStrand	10	2	-inf
chr2	127317007	127317024	protein_coding	Kcnip3	intron	ENSMUSG00000079056	NonProperStrand	18	chr17	24857716	24857775	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.5014
chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	chr5	121655016	121655080	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-1.5377
chr4	79649080	79649124	pseudogene	Gm11407	.	ENSMUSG00000082179	ProperStrand	26	chr5	130300460	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-6.8058
chr9	20600290	20600403	protein_coding	Col5a3	exon	ENSMUSG00000004098	NonProperStrand	14	chr16	23110864	23110931	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-4.0210
chr8	11621087	11621125	protein_coding	Ankrd10	intron	ENSMUSG00000031508	ProperStrand	32	chr13	96100592	96100692	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	1	-9.3324
chr12	110881077	110888948	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr11	69483136	69483269	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	10	-4.3326
chr7	133726521	133726538	protein_coding	Cln3	exon	ENSMUSG00000030720	ProperStrand	87	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-7.8505
chr18	61715367	61715386	protein_coding	Csnk1a1	utr5	ENSMUSG00000024576	NonProperStrand	35	chr19	45493453	45493496	protein_coding	Btrc	intron	ENSMUSG00000025217	ProperStrand	14	1	-17.4122
chr6	38384108	38384198	protein_coding	Ubn2	utr5	ENSMUSG00000038538	ProperStrand	86	chr15	98350203	98350283	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-4.0747
chr17	13115696	13115786	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	chr4	122968591	122968671	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	4	-5.0884
chr12	53619860	53619948	protein_coding	Arhgap5	exon	ENSMUSG00000035133	ProperStrand	16	chr18	33954853	33954943	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-6.0667
chr8	109942120	109942243	protein_coding	Nob1	exon	ENSMUSG00000003848	ProperStrand	28	chr9	15119719	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-6.7865
chr11	6428077	6428156	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr1	63225285	63225322	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	3	-1.0430
chr8	34420358	34420438	protein_coding	Wrn	intron	ENSMUSG00000031583	ProperStrand	7	chr4	57901597	57901687	protein_coding	Akap2	intron	ENSMUSG00000038729	ProperStrand	14	1	-inf
chr17	24858020	24858107	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr2	158185576	158185666	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	4	-10.3191
chr7	116664066	116665151	protein_coding	Rpl27a	exon	ENSMUSG00000046364	ProperStrand	149	chr7	52382256	52382315	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	2	-10.4649
chr2	90235298	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr3	109909040	109909059	protein_coding	Ntng1	intron	ENSMUSG00000059857	NonProperStrand	6	1	-9.1372
chr16	8697010	8697738	protein_coding	Usp7	exon	ENSMUSG00000022710	ProperStrand	118	chr1	185857228	185857244	protein_coding	1700056E22Rik	exon	ENSMUSG00000044854	ProperStrand	173	1	-9.8312
chr4	68423441	68423457	protein_coding	Dbc1	exon	ENSMUSG00000028351	ProperStrand	78	chr1	155272659	155272676	protein_coding	1700012A16Rik	exon	ENSMUSG00000042708	ProperStrand	523	1	-8.4538
chr7	129312398	129312447	protein_coding	Plk1	exon	ENSMUSG00000030867	ProperStrand	146	chr7	148634743	148634842	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-2.3904
chr13	107737212	107737228	protein_coding	Dimt1	utr5	ENSMUSG00000021692	ProperStrand	185	chr17	75042651	75042705	protein_coding	Birc6	exon	ENSMUSG00000024073	ProperStrand	110	1	-9.8377
chr1	33828651	33828669	protein_coding	Zfp451	intron	ENSMUSG00000042197	NonProperStrand	393	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	3	-6.2923
chr14	72301755	72301771	SINE	B4	B4	chr14B472301692	NonProperStrand	99	chr2	5283064	5283127	protein_coding	Camk1d	exon	ENSMUSG00000039145	ProperStrand	50	1	-12.6750
chr19	38400349	38400461	LTR	RLTR17	ERVK	chr19RLTR1738399993	ProperStrand	1	chr2	91771082	91771120	protein_coding	Mdk	exon	ENSMUSG00000027239	ProperStrand	56	1	-inf
chr7	133939510	133939566	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	chr6	115758041	115758131	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-1.1465
chr2	63884216	63884234	protein_coding	Fign	intron	ENSMUSG00000075324	ProperStrand	8	chr9	120037909	120037968	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-8.7708
chr1	180260942	180261278	protein_coding	Hnrnpu	exon	ENSMUSG00000039630	ProperStrand	286	chr5	108334228	108334308	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-2.0083
chr17	34727760	34727777	protein_coding	Gpsm3	exon	ENSMUSG00000034786	ProperStrand	12	chr19	8798484	8798513	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-8.4427
chr11	23794837	23794854	antisense	Gm12061	.	ENSMUSG00000084769	ProperStrand	18	chr12	17552949	17552983	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-7.4836
chr11	42440243	42440259	protein_coding	Gabrb2	exon	ENSMUSG00000007653	ProperStrand	248	chr4	116827121	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-4.2778
chr14	45949538	45949554	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	chr5	108334195	108334257	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-1.8020
chr5	24901231	24901262	protein_coding	Mll3	utr5	ENSMUSG00000038056	ProperStrand	31	chr15	79913300	79913351	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.8473
chr10	6450631	6450649	protein_coding	Plekhg1	intron	ENSMUSG00000040624	NonProperStrand	75	chr8	72287172	72287188	protein_coding	Zfp866	utr3	ENSMUSG00000043090	NonProperStrand	134	1	-11.2515
chr17	27957217	27957317	protein_coding	D17Wsu92e	utr5	ENSMUSG00000056692	ProperStrand	61	chr7	117190028	117190060	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.3022
chr5	112865460	112865476	protein_coding	Sez6l	exon	ENSMUSG00000058153	ProperStrand	81	chr18	35714144	35714234	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-5.0313
chr8	73419587	73419821	protein_coding	Rpl18a	exon	ENSMUSG00000045128	ProperStrand	394	chr10	89512698	89512714	protein_coding	Anks1b	exon	ENSMUSG00000058589	ProperStrand	68	1	-9.2925
chr11	79845586	79845676	protein_coding	Suz12	exon	ENSMUSG00000017548	ProperStrand	53	chr19	8800393	8800473	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-3.7600
chr16	34989079	34995163	protein_coding	Mylk	exon	ENSMUSG00000022836	ProperStrand	19	chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	1	-11.9111
chr4	109178222	109178239	protein_coding	4930522H14Rik	exon	ENSMUSG00000060491	ProperStrand	12	chr16	23111451	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-6.8529
chr16	69864288	69864306	LINE	Lx2A1	L1	chr16Lx2A169863625	NonProperStrand	22	chr2	91436228	91436333	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-9.5194
chr3	98137207	98138526	protein_coding	Phgdh	exon	ENSMUSG00000053398	ProperStrand	46	chr17	35384172	35384195	snoRNA	ENSMUSG00000065273_SNORD83	.	ENSMUSG00000065273	ProperStrand	244	1	-11.0361
chr7	134341340	134341357	protein_coding	Tbc1d10b	utr3	ENSMUSG00000042492	ProperStrand	187	chr15	79908931	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-3.3199
chr14	61830069	61830103	protein_coding	Sacs	exon	ENSMUSG00000048279	ProperStrand	65	chr6	94776852	94776875	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	1	-8.9404
chr6	44154836	44154897	LTR	ORR1A1	MaLR	chr6ORR1A144154662	ProperStrand	1	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-inf
chr2	91416183	91416329	protein_coding	Ckap5	exon	ENSMUSG00000040549	ProperStrand	53	chr1	24621011	24621048	protein_coding	Gm10925	utr3	ENSMUSG00000090378	ProperStrand	320	3	-19.8007
chr2	90235299	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	87340233	87340249	protein_coding	Dand5	exon	ENSMUSG00000053226	ProperStrand	34	2	-9.1230
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr8	70219588	70219604	protein_coding	Psd3	utr3	ENSMUSG00000030465	ProperStrand	19	1	-11.0446
chr11	77995189	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	chr1	145626090	145626190	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-2.0461
chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-4.5660
chr3	66100724	66100740	protein_coding	Veph1	utr5	ENSMUSG00000027831	NonProperStrand	92	chr15	71624752	71624798	snoRNA	ENSMUSG00000088895_SNORA81	.	ENSMUSG00000088895	ProperStrand	348	1	-8.9345
chr13	44918782	44918872	protein_coding	Jarid2	exon	ENSMUSG00000038518	ProperStrand	372	chr17	24856619	24856699	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-2.9629
chr11	6428036	6428158	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr3	153574629	153574654	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	3	-1.9896
chr7	134461531	134461632	protein_coding	Itgal	intron	ENSMUSG00000030830	ProperStrand	38	chr9	120037980	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-5.5948
chr9	64022855	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	chr16	43886794	43886849	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	1	-2.9871
chr5	46116859	46116875	protein_coding	Lcorl	intron	ENSMUSG00000015882	ProperStrand	15	chr2	158451026	158451042	protein_coding	Actr5	exon	ENSMUSG00000037761	NonProperStrand	94	1	-15.2263
mmu-miR-6240	4	23	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr5	118477951	118477967	protein_coding	Tesc	exon	ENSMUSG00000029359	ProperStrand	114	1	-4.6573
chr19	5843252	5843463	non_coding	Neat1	.	ENSMUSG00000092274	ProperStrand	63	chr16	23111691	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-3.3449
chr4	128574130	128574146	protein_coding	Trim62	exon	ENSMUSG00000041000	NonProperStrand	13	chr6	72739212	72739229	protein_coding	Tcf7l1	utr5	ENSMUSG00000055799	ProperStrand	61	1	-16.3423
chr2	60159800	60159816	protein_coding	Ly75	exon	ENSMUSG00000026980	NonProperStrand	4	chr7	116663633	116663710	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-13.1590
chr19	11015616	11015632	protein_coding	Gpr44	exon	ENSMUSG00000034117	NonProperStrand	118	chr4	53873612	53873646	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	1	-7.6941
chr15	37949229	37949288	protein_coding	Ubr5	exon	ENSMUSG00000037487	ProperStrand	258	chr17	32197416	32197432	protein_coding	Rrp1b	exon	ENSMUSG00000058392	NonProperStrand	39	1	-11.2579
chr11	51457389	51457477	protein_coding	N4bp3	exon	ENSMUSG00000001053	ProperStrand	45	chr1	58393431	58393450	protein_coding	Aox3l1	intron	ENSMUSG00000079554	ProperStrand	3	1	-inf
mmu-miR-1949	3	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr4	98590658	98590758	protein_coding	Usp1	utr5	ENSMUSG00000028560	ProperStrand	11	1	-11.6068
chr16	96223510	96223600	protein_coding	Brwd1	utr3	ENSMUSG00000022914	ProperStrand	77	chr18	35716685	35716765	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.7704
chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	chr14	56492975	56492991	protein_coding	Nynrin	utr3	ENSMUSG00000075592	ProperStrand	76	1	-9.5999
chr11	97028996	97030467	protein_coding	Kpnb1	exon	ENSMUSG00000001440	ProperStrand	197	chr10	110918552	110918632	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-1.4613
chr13	98263258	98263294	lincRNA	Gm11019	intron	ENSMUSG00000078952	ProperStrand	113	chr17	35089181	35089234	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-4.2663
chr2	129998643	129998665	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr10	7383389	7383405	protein_coding	Pcmt1	utr5	ENSMUSG00000019795	ProperStrand	55	1	-8.2835
chrX	11635752	11635828	protein_coding	Bcor	exon	ENSMUSG00000040363	ProperStrand	20	chr5	108334231	108334331	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-6.9926
chr8	120090727	120090750	protein_coding	Plcg2	exon	ENSMUSG00000034330	ProperStrand	57	chr7	117189863	117189943	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	2	-10.2297
chr7	25785706	25785945	protein_coding	Atp1a3	exon	ENSMUSG00000040907	ProperStrand	66	chr19	8800462	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-3.3551
chr2	70927899	70927915	protein_coding	Dcaf17	exon	ENSMUSG00000041966	NonProperStrand	89	chr9	15117013	15117106	snoRNA	ENSMUSG00000077614_SNORA40	.	ENSMUSG00000077614	ProperStrand	54	1	-12.7354
chr16	14473972	14473994	protein_coding	Abcc1	utr3	ENSMUSG00000023088	NonProperStrand	2	chr18	35714142	35714242	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	NonProperStrand	47	1	-inf
chr17	15867452	15867482	protein_coding	Chd1	exon	ENSMUSG00000023852	ProperStrand	82	chr10	107792223	107792243	protein_coding	Pawr	intron	ENSMUSG00000035873	ProperStrand	39	1	-13.5550
chr9	106333730	106333748	protein_coding	Rpl29	exon	ENSMUSG00000048758	ProperStrand	45	chr4	131908357	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-7.2867
chr7	116077971	116078030	protein_coding	Eif3f	exon	ENSMUSG00000031029	ProperStrand	69	chr11	69481335	69481420	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	6	-16.1355
chr16	18283302	18283319	protein_coding	Dgcr8	exon	ENSMUSG00000022718	ProperStrand	67	chr17	35647492	35647542	protein_coding	Pou5f1	utr3	ENSMUSG00000024406	ProperStrand	104	1	-11.9873
chr4	132633622	132633702	protein_coding	Ahdc1	utr3	ENSMUSG00000037692	ProperStrand	100	chr16	96344013	96346408	protein_coding	Hmgn1	exon	ENSMUSG00000040681	ProperStrand	38	1	-13.2101
chr5	125315761	125315861	protein_coding	Ccdc92	utr3	ENSMUSG00000037979	ProperStrand	45	chr3	123210854	123210881	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.5489
chr7	28146782	28146798	protein_coding	Spnb4	exon	ENSMUSG00000011751	NonProperStrand	84	chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	1	-8.6003
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr3	68889025	68889142	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	3	-1.1815
chr3	27016641	27016658	protein_coding	Ect2	intron	ENSMUSG00000027699	NonProperStrand	4	chr4	116828429	116828453	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	2	-inf
chr1	77365126	77365211	protein_coding	Epha4	utr3	ENSMUSG00000026235	ProperStrand	57	chr9	83737290	83737495	protein_coding	Ttk	exon	ENSMUSG00000038379	ProperStrand	36	3	-20.1584
chr8	97160554	97160644	protein_coding	Rspry1	exon	ENSMUSG00000050079	ProperStrand	27	chr6	115758040	115758120	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-7.0551
chr9	123763783	123763799	protein_coding	Xcr1	utr3	ENSMUSG00000060509	NonProperStrand	40	chr16	23110893	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.7072
chr5	136707644	136707662	protein_coding	Sh2b2	exon	ENSMUSG00000005057	NonProperStrand	101	chr1	178754159	178754175	protein_coding	Sdccag8	intron	ENSMUSG00000026504	ProperStrand	54	1	-12.4802
chr12	3968611	3968627	protein_coding	Efr3b	exon	ENSMUSG00000020658	ProperStrand	142	chr14	31382312	31383188	protein_coding	Tkt	exon	ENSMUSG00000021957	ProperStrand	160	1	-9.6170
chr10	42549324	42549396	protein_coding	Sec63	utr3	ENSMUSG00000019802	ProperStrand	10	chr11	6428060	6428160	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	5	-inf
chr19	8799015	8799099	lincRNA	Snhg1	exon	ENSMUSG00000090867	ProperStrand	100	chr6	122679844	122679907	protein_coding	Slc2a3	utr3	ENSMUSG00000003153	ProperStrand	682	3	-16.6979
chr7	63468256	63468340	protein_coding	Herc2	exon	ENSMUSG00000030451	ProperStrand	66	chr17	13174667	13176363	protein_coding	Wtap	exon	ENSMUSG00000060475	ProperStrand	119	8	-20.0626
chr4	148494710	148494727	protein_coding	Dffa	utr3	ENSMUSG00000028974	NonProperStrand	23	chr4	11435133	11435188	protein_coding	1110037F02Rik	exon	ENSMUSG00000040720	ProperStrand	32	1	-16.5231
chr6	128325731	128325762	protein_coding	Foxm1	utr3	ENSMUSG00000001517	ProperStrand	31	chr2	158184124	158184196	snoRNA	ENSMUSG00000064995_SNORA71	.	ENSMUSG00000064995	ProperStrand	430	2	-16.7845
chr2	11664446	11664462	protein_coding	Fbxo18	utr3	ENSMUSG00000058594	NonProperStrand	2	chr7	52381973	52382014	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-14.1622
chr11	50139033	50139133	protein_coding	Canx	utr5	ENSMUSG00000020368	ProperStrand	296	chr11	109259044	109259061	protein_coding	Gna13	utr3	ENSMUSG00000020611	ProperStrand	23	1	-12.0555
chr2	57221871	57221903	protein_coding	Gpd2	utr3	ENSMUSG00000026827	ProperStrand	93	chr17	24857716	24857806	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	9	-17.8228
chr19	30124957	30124983	protein_coding	Uhrf2	intron	ENSMUSG00000024817	ProperStrand	40	chr11	86521111	86522510	protein_coding	Cltc	exon	ENSMUSG00000047126	ProperStrand	319	4	-inf
chr2	51976693	51976736	protein_coding	Rif1	utr3	ENSMUSG00000036202	ProperStrand	201	chr2	144091716	144091779	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	ProperStrand	549	4	-19.3187
chr15	79913289	79913332	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr7	30041660	30041772	protein_coding	Spint2	utr3	ENSMUSG00000074227	ProperStrand	82	1	-3.0242
chr10	60692417	60692433	protein_coding	Adamts14	exon	ENSMUSG00000059901	NonProperStrand	127	chr9	15119968	15120012	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-5.7729
chr6	67221888	67222007	protein_coding	Serbp1	exon	ENSMUSG00000036371	ProperStrand	261	chr5	74489648	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-1.3164
chr9	15120970	15121084	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	chr16	23110546	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	6	-3.5090
chr2	131886479	131887826	protein_coding	Slc23a2	exon	ENSMUSG00000027340	ProperStrand	44	chr15	79913288	79913344	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.1738
chr1	174436355	174436394	protein_coding	Tagln2	exon	ENSMUSG00000026547	ProperStrand	39	chr19	46728484	46728574	protein_coding	D19Wsu162e	exon	ENSMUSG00000047731	ProperStrand	16	1	-16.8747
chr5	115782180	115782215	protein_coding	Srsf9	exon	ENSMUSG00000029538	ProperStrand	19	chr7	117189945	117190015	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-5.5364
chr1	132742959	132742975	protein_coding	Pigr	exon	ENSMUSG00000026417	NonProperStrand	48	chr11	120134685	120134701	protein_coding	Bahcc1	exon	ENSMUSG00000039741	ProperStrand	118	1	-12.4049
chr14	15572350	15572367	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr1	88252838	88252899	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	2	-7.7265
chr18	58987640	58987660	LINE	L2c	L2	chr18L2c58987333	NonProperStrand	1	chr17	27767399	27767431	protein_coding	Rps10	utr3	ENSMUSG00000052146	ProperStrand	94	1	-inf
chr7	134379814	134379904	protein_coding	Zfp553	exon	ENSMUSG00000045598	ProperStrand	7	chr15	79908929	79909009	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-9.8509
chr11	48613951	48614022	protein_coding	Gnb2l1	utr5	ENSMUSG00000020372	NonProperStrand	3	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	NonProperStrand	91	1	-19.6691
chr5	90136836	90136852	protein_coding	Adamts3	exon	ENSMUSG00000043635	ProperStrand	8	chr10	23505152	23505250	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.7871
chr7	108971290	108971306	protein_coding	Inppl1	utr3	ENSMUSG00000032737	ProperStrand	272	chr10	90432659	90432678	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	1	-7.5994
chr11	75546575	75565392	protein_coding	Ywhae	exon	ENSMUSG00000020849	ProperStrand	176	chr9	21483586	21490476	protein_coding	Smarca4	exon	ENSMUSG00000032187	ProperStrand	196	1	-8.7832
chr3	85942437	85942484	protein_coding	Rps3a	exon	ENSMUSG00000028081	ProperStrand	177	chr19	8799597	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-4.6552
chr2	178194847	178194864	protein_coding	Cdh26	exon	ENSMUSG00000039155	NonProperStrand	77	chr7	29136548	29136618	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.9549
chr1	74502762	74502786	protein_coding	Usp37	exon	ENSMUSG00000033364	ProperStrand	47	chr6	125064385	125070229	protein_coding	Chd4	exon	ENSMUSG00000063870	ProperStrand	303	2	-16.6440
chr14	33005038	33005138	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	chr1	39605591	39605696	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	14	-10.5720
chr19	42199431	42199447	protein_coding	Avpi1	exon	ENSMUSG00000018821	NonProperStrand	9	chr1	165243147	165243164	protein_coding	Prrx1	utr5	ENSMUSG00000026586	NonProperStrand	28	1	-18.3648
chr7	142899713	142899782	protein_coding	Mki67	exon	ENSMUSG00000031004	ProperStrand	286	chr7	103972454	103985799	protein_coding	Odz4	exon	ENSMUSG00000048078	ProperStrand	93	3	-20.2098
chr10	58633601	58633663	protein_coding	Sept10	exon	ENSMUSG00000019917	ProperStrand	34	chr7	117166808	117166860	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	2	-9.6685
chr4	133236358	133236410	protein_coding	Arid1a	exon	ENSMUSG00000007880	ProperStrand	465	chr5	65653918	65653935	protein_coding	Rfc1	utr3	ENSMUSG00000029191	ProperStrand	53	1	-9.4626
chr8	112065767	112066296	protein_coding	Pmfbp1	exon	ENSMUSG00000031727	NonProperStrand	17	chr11	77995188	77995237	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-8.7173
chr19	4801118	4801148	protein_coding	Rbm14	utr3	ENSMUSG00000006456	ProperStrand	84	chr18	35714217	35714267	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-4.9311
chr15	102301159	102301206	protein_coding	Pcbp2	utr5	ENSMUSG00000056851	ProperStrand	164	chr14	61398407	61398423	protein_coding	C1qtnf9	exon	ENSMUSG00000071347	ProperStrand	187	1	-9.0178
chr2	32818158	32818538	protein_coding	Rpl12	exon	ENSMUSG00000038900	ProperStrand	167	chr14	33005161	33005236	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	10	-21.2897
chr7	72455893	72455974	protein_coding	Tjp1	exon	ENSMUSG00000030516	ProperStrand	78	chr11	69481376	69481466	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-2.7338
chr7	108440949	108440967	protein_coding	Atg16l2	intron	ENSMUSG00000047767	ProperStrand	121	chr4	131865855	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.6581
chr4	43505743	43505874	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr5	115940316	115940407	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	3	-0.8291
chr15	81740029	81740062	protein_coding	Aco2	exon	ENSMUSG00000022477	NonProperStrand	3	chr16	23110911	23111001	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr4	108507426	108507483	protein_coding	Txndc12	intron	ENSMUSG00000028567	ProperStrand	23	chr16	23111452	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-4.9111
chr12	113838575	113839600	protein_coding	Inf2	exon	ENSMUSG00000037679	ProperStrand	12	chr12	106269320	106269400	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-7.3282
chr15	79366117	79368893	protein_coding	Ddx17	intron	ENSMUSG00000055065	ProperStrand	140	chr4	131908689	131908797	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-2.2084
chr11	95866811	95866901	protein_coding	Igf2bp1	exon	ENSMUSG00000013415	ProperStrand	140	chr16	23111690	23111770	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-0.7472
chr11	32519945	32520035	protein_coding	Stk10	intron	ENSMUSG00000020272	ProperStrand	11	chr5	121655035	121655116	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-7.0917
chr9	22167198	22180609	protein_coding	Anln	exon	ENSMUSG00000036777	ProperStrand	133	chr3	123210853	123210975	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	8	-11.4156
chr11	11729167	11735748	protein_coding	Ddc	exon	ENSMUSG00000020182	ProperStrand	19	chr16	23110454	23110491	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.5826
chr17	80600689	80600716	protein_coding	Srsf7	utr3	ENSMUSG00000024097	ProperStrand	31	chr17	13112504	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-5.8680
chr3	105746639	105746656	protein_coding	Atp5f1	exon	ENSMUSG00000000563	ProperStrand	28	chr8	18802977	18803012	protein_coding	Mcph1	utr3	ENSMUSG00000039842	ProperStrand	34	2	-18.9821
chr3	33668089	33668179	LINE	L1Md_T	L1	chr3L1Md_T33667049	ProperStrand	1	chr7	29136565	29136645	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-inf
chr2	179915090	179915339	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr3	34550330	34550362	protein_coding	Sox2	utr3	ENSMUSG00000074637	ProperStrand	299	1	-6.5003
chr15	80078457	80078843	protein_coding	Smcr7l	exon	ENSMUSG00000022412	ProperStrand	19	chr4	131888523	131888563	protein_coding	Rcc1	utr3	ENSMUSG00000028896	ProperStrand	55	1	-15.7982
chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	chr10	22431892	22451006	protein_coding	Tbpl1	utr5	ENSMUSG00000071359	ProperStrand	4	1	-13.3930
chr17	27699755	27699855	protein_coding	Hmga1	utr3	ENSMUSG00000046711	ProperStrand	180	chr7	29136583	29136661	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-1.6015
chr11	120434001	120434101	protein_coding	P4hb	exon	ENSMUSG00000025130	ProperStrand	83	chr16	23109028	23109093	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-6.6377
chr10	10673954	10673971	protein_coding	Grm1	intron	ENSMUSG00000019828	ProperStrand	38	chr14	76247711	76247778	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-5.0499
chr13	34993512	34993562	protein_coding	Prpf4b	utr3	ENSMUSG00000021413	ProperStrand	50	chr11	69483189	69483279	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	6	-15.5621
chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	chr4	131865380	131865449	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	3	-4.5220
chr16	13813223	13813266	protein_coding	Rrn3	exon	ENSMUSG00000022682	ProperStrand	58	chr9	120039581	120039684	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.3806
chrX	108563931	108563947	protein_coding	Rps6ka6	exon	ENSMUSG00000025665	ProperStrand	17	chr5	125994341	125994595	protein_coding	Aacs	exon	ENSMUSG00000029482	ProperStrand	12	2	-inf
chr14	56214109	56214360	protein_coding	Rnf31	utr5	ENSMUSG00000047098	ProperStrand	17	chr7	118219704	118219729	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	5	-inf
chr1	136522055	136522071	protein_coding	Kdm5b	intron	ENSMUSG00000042207	ProperStrand	223	chr7	117180576	117182701	protein_coding	Ipo7	exon	ENSMUSG00000066232	ProperStrand	2121	1	-3.6881
chr11	113590469	113590515	protein_coding	Cdc42ep4	exon	ENSMUSG00000041598	ProperStrand	56	chr10	23505152	23505253	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-7.6132
chr17	24858227	24858635	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr19	8800085	8800127	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-4.0499
chr1	88425771	88426331	protein_coding	Ptma	exon	ENSMUSG00000026238	ProperStrand	385	chr4	131865855	131865986	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	5	-1.0663
chr17	36000485	36000501	protein_coding	Nrm	exon	ENSMUSG00000059791	ProperStrand	253	chr1	162968441	162968508	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-3.3355
chr3	130399363	130406271	protein_coding	Ostc	exon	ENSMUSG00000041084	ProperStrand	10	chr16	23110849	23110872	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.7978
chr13	23634981	23635071	protein_coding	Hist1h2bh	exon	ENSMUSG00000064168	ProperStrand	7	chr7	29136532	29136622	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-6.5022
chr18	77342759	77342777	protein_coding	Pias2	intron	ENSMUSG00000025423	ProperStrand	52	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-6.1497
chr17	35001519	35001535	protein_coding	Gm20547	exon	ENSMUSG00000092511	ProperStrand	9	chr17	24857723	24857852	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	4	-18.2025
chr12	8348987	8349077	protein_coding	Hs1bp3	utr3	ENSMUSG00000020605	ProperStrand	35	chr16	23110910	23110990	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.8578
chr3	34115536	34115554	non_coding	Sox2ot	.	ENSMUSG00000090828	ProperStrand	25	chr16	23110828	23110882	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.2939
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr9	78328470	78329472	protein_coding	Eef1a1	utr5	ENSMUSG00000037742	ProperStrand	1990	1	-2.1400
chr15	84770546	84770636	protein_coding	Nup50	utr3	ENSMUSG00000016619	ProperStrand	39	chr16	23110965	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-5.3244
chr8	71837259	71837349	LINE	L1_Mur2	L1	chr8L1_Mur271837258	NonProperStrand	1	chr4	131865860	131865940	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr16	37868498	37868588	protein_coding	Lrrc58	utr5	ENSMUSG00000034158	ProperStrand	23	chr8	32260346	32260426	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-6.5150
chr16	38794688	38794709	protein_coding	Upk1b	intron	ENSMUSG00000049436	NonProperStrand	4	chr17	26360445	26360532	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	3	-20.4643
chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr3	89750435	89750451	protein_coding	Atp8b2	exon	ENSMUSG00000060671	ProperStrand	140	1	-4.8008
chr2	29014439	29014455	protein_coding	Setx	exon	ENSMUSG00000043535	ProperStrand	187	chr8	73033207	73033241	protein_coding	2810422J05Rik	exon	ENSMUSG00000055553	ProperStrand	171	1	-8.9344
chr2	90235299	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	117811168	117811476	protein_coding	Kdm4a	exon	ENSMUSG00000033326	ProperStrand	81	1	-3.8951
chr15	98675165	98675255	protein_coding	Mll2	exon	ENSMUSG00000048154	ProperStrand	170	chr11	116938557	116938637	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-4.1464
chr13	22098354	22098371	protein_coding	Prss16	intron	ENSMUSG00000006179	ProperStrand	78	chr1	162965531	162965560	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.8070
chr10	57219238	57219256	protein_coding	Hsf2	exon	ENSMUSG00000019878	ProperStrand	40	chr4	131865918	131865987	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-6.4934
chr17	13184995	13185013	protein_coding	Wtap	utr5	ENSMUSG00000060475	ProperStrand	119	chr16	23110551	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.3833
chr3	86887096	86887120	protein_coding	Kirrel	exon	ENSMUSG00000041734	ProperStrand	22	chr8	97989585	98001144	protein_coding	Csnk2a2	exon	ENSMUSG00000046707	ProperStrand	21	1	-17.2767
chrX	38831793	38831810	protein_coding	Gria3	exon	ENSMUSG00000001986	ProperStrand	32	chr16	23110894	23110953	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.9664
chr11	96770147	96773540	protein_coding	Cdk5rap3	exon	ENSMUSG00000018669	ProperStrand	16	chr16	23111381	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-11.9923
chr7	13516148	13516211	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chrX	45610105	45610123	protein_coding	Utp14a	utr5	ENSMUSG00000063785	ProperStrand	22	1	-10.6948
chr11	94495960	94496014	protein_coding	Lrrc59	exon	ENSMUSG00000020869	ProperStrand	115	chr11	63885336	63887052	protein_coding	Cox10	exon	ENSMUSG00000042148	NonProperStrand	187	1	-9.7272
chr2	121949511	121949528	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	chr6	125111958	125112043	protein_coding	Gapdh	utr3	ENSMUSG00000057666	ProperStrand	356	6	-19.4712
chr14	121886274	121889013	protein_coding	Slc15a1	exon	ENSMUSG00000025557	ProperStrand	14	chrX	166421924	166422932	protein_coding	Mid1	exon	ENSMUSG00000035299	ProperStrand	209	3	-inf
chr7	135116083	135116133	protein_coding	Fus	exon	ENSMUSG00000030795	ProperStrand	162	chr7	29136526	29136631	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-0.9040
chr2	68152623	68196899	protein_coding	Stk39	exon	ENSMUSG00000027030	ProperStrand	12	chr17	13112462	13112552	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-7.7885
chr9	103267385	103267455	protein_coding	Cdv3	exon	ENSMUSG00000032803	ProperStrand	68	chr11	77996585	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	3	-13.5007
chr17	66468410	66468427	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	chr2	168574781	168574831	protein_coding	Sall4	utr3	ENSMUSG00000027547	ProperStrand	82	1	-9.2288
chr5	149143518	149143618	protein_coding	Slc7a1	utr3	ENSMUSG00000041313	ProperStrand	65	chr4	131908689	131908752	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-2.1839
chr5	77391509	77393562	protein_coding	Paics	exon	ENSMUSG00000029247	ProperStrand	78	chr17	24857717	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	6	-11.8891
chr2	73156348	73156448	protein_coding	Scrn3	exon	ENSMUSG00000008226	ProperStrand	9	chr7	116663712	116663767	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-6.1447
chr9	58082309	58082399	protein_coding	Pml	exon	ENSMUSG00000036986	ProperStrand	45	chr11	69481387	69481467	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-6.3209
chr5	108333592	108333664	snoRNA	ENSMUSG00000064453_Snord21	.	ENSMUSG00000064453	ProperStrand	201	chrX	34622920	34623010	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-2.3425
chr2	47962755	47962773	lincRNA	Gm13481	intron	ENSMUSG00000086353	NonProperStrand	36	chr15	34370631	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-4.5131
chr11	87913128	87913145	processed_transcript	2210416O15Rik	.	ENSMUSG00000087498	ProperStrand	76	chr15	58768973	58770830	protein_coding	Ndufb9	exon	ENSMUSG00000022354	ProperStrand	13	1	-15.9349
chr6	42268179	42268196	protein_coding	Fam131b	exon	ENSMUSG00000029861	ProperStrand	6	chr11	69483137	69483194	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-11.4504
chr7	134703687	134703719	protein_coding	Srcap	exon	ENSMUSG00000090663	ProperStrand	28	chr7	117189960	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	5	-18.9083
chr11	120819938	120820027	protein_coding	Slc16a3	utr3	ENSMUSG00000025161	ProperStrand	98	chr9	15119704	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.8191
chr9	77933054	77933075	protein_coding	Fbxo9	intron	ENSMUSG00000001366	ProperStrand	6	chr18	35716764	35716829	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-6.6008
chr11	6519809	6519909	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	chr15	5068444	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-1.2880
chr17	88389790	88389830	protein_coding	Msh6	exon	ENSMUSG00000005370	ProperStrand	150	chr11	98878371	98878470	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	3	-10.7455
chr11	3541100	3541163	lincRNA	Tug1	exon	ENSMUSG00000056579	ProperStrand	15	chr11	6428089	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.8593
chr7	30062184	30062203	protein_coding	Spint2	intron	ENSMUSG00000074227	ProperStrand	82	chr3	96132420	96132514	snRNA	ENSMUSG00000075978_U1	.	ENSMUSG00000075978	ProperStrand	132	2	-17.3248
chr11	100181449	100182054	protein_coding	Eif1	exon	ENSMUSG00000035530	ProperStrand	115	chr11	62418041	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-4.3031
chr8	87368087	87368295	protein_coding	Calr	exon	ENSMUSG00000003814	ProperStrand	232	chr7	51503462	51503547	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	1	-5.9345
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr6	148021779	148021796	protein_coding	Far2	intron	ENSMUSG00000030303	NonProperStrand	5	1	-14.0665
chr17	39979984	39980002	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr6	112689098	112689322	protein_coding	Srgap3	exon	ENSMUSG00000030257	NonProperStrand	208	1	-4.7885
chr11	77505773	77524607	protein_coding	Nufip2	exon	ENSMUSG00000037857	ProperStrand	36	chr16	23110876	23111010	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-7.4626
chr11	6160308	6160333	protein_coding	Ddx56	intron	ENSMUSG00000004393	ProperStrand	21	chr15	78981785	78981835	protein_coding	Polr2f	exon	ENSMUSG00000033020	ProperStrand	35	1	-16.5548
chr2	26493418	26493508	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr18	48207210	48207285	protein_coding	Gm5506	exon	ENSMUSG00000059040	ProperStrand	105	1	-5.1008
chr8	87798880	87802626	protein_coding	Vps35	exon	ENSMUSG00000031696	ProperStrand	27	chr13	21259938	21259975	tRNA	tRNA1000-LysTTT	.	1124035	ProperStrand	86	1	-14.2042
chr10	78341063	78341084	protein_coding	Olfr1355	intron	ENSMUSG00000062873	NonProperStrand	1	chr11	77996557	77996606	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-inf
chr5	65986294	65986368	protein_coding	Ube2k	utr3	ENSMUSG00000029203	ProperStrand	289	chr10	23505548	23505612	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-4.4759
chr6	17237062	17237080	protein_coding	Cav2	utr3	ENSMUSG00000000058	ProperStrand	8	chr15	79913287	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-7.5918
chr17	93601699	93602138	protein_coding	Adcyap1	exon	ENSMUSG00000024256	NonProperStrand	1	chr6	119305320	119305360	protein_coding	Adipor2	utr3	ENSMUSG00000030168	ProperStrand	79	1	-inf
chr4	33333477	33335007	protein_coding	Pnrc1	exon	ENSMUSG00000040128	ProperStrand	27	chr6	115758034	115758114	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-7.0551
chr8	73033212	73033253	protein_coding	2810422J05Rik	exon	ENSMUSG00000055553	ProperStrand	171	chr14	52829460	52829547	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-6.1258
chr5	138620710	138620734	protein_coding	Taf6	exon	ENSMUSG00000036980	ProperStrand	11	chr17	24857717	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-5.4831
chr16	35981697	35981729	antisense	Gm15564	.	ENSMUSG00000086324	ProperStrand	6	chr7	30074411	30074430	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	ProperStrand	10	1	-19.0093
chr18	10052128	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr7	118219574	118219740	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	3	-2.2300
chr2	121949511	121949527	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	chr7	138459653	138459669	protein_coding	Cuzd1	exon	ENSMUSG00000040205	NonProperStrand	59	1	-10.3320
chr8	85689747	85689763	protein_coding	Tbc1d9	utr5	ENSMUSG00000031709	ProperStrand	66	chr2	93041750	93041823	protein_coding	Trp53i11	utr3	ENSMUSG00000068735	ProperStrand	46	1	-13.6581
chr10	72437415	72437431	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr11	95138815	95138871	protein_coding	Myst2	exon	ENSMUSG00000038909	ProperStrand	56	1	-8.4541
chr3	53268082	53268115	protein_coding	2810046L04Rik	utr5	ENSMUSG00000049504	ProperStrand	15	chr4	131908805	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-12.2279
chr8	126343264	126343281	protein_coding	Rab4a	intron	ENSMUSG00000019478	NonProperStrand	15	chr8	124443188	124443235	protein_coding	Car5a	intron	ENSMUSG00000025317	ProperStrand	7	1	-inf
chr10	74796117	74796133	protein_coding	Adora2a	exon	ENSMUSG00000020178	NonProperStrand	2	chr7	52381581	52381599	protein_coding	Rpl13a	exon	ENSMUSG00000074129	ProperStrand	269	1	-17.8932
chr3	16083612	16083629	protein_coding	Ythdf3	intron	ENSMUSG00000047213	ProperStrand	22	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.5019
chr11	45723144	45723160	protein_coding	Clint1	utr3	ENSMUSG00000006169	NonProperStrand	273	chr2	158185576	158185655	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-3.5750
chr2	172181759	172181849	protein_coding	Aurka	utr3	ENSMUSG00000027496	ProperStrand	31	chr19	8963096	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.4420
chr7	116663652	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	chr15	98356776	98356909	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	8	-1.0382
chr2	155651523	155651575	protein_coding	Eif6	utr3	ENSMUSG00000027613	ProperStrand	42	chr15	98350146	98350249	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-5.4538
chr19	5602205	5602264	protein_coding	Rnaseh2c	exon	ENSMUSG00000024925	ProperStrand	1	chr7	117189864	117189899	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-inf
chr3	79399208	79401672	protein_coding	Ppid	exon	ENSMUSG00000027804	ProperStrand	7	chr16	23111442	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-5.0992
chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr18	53845596	53845612	protein_coding	Cep120	exon	ENSMUSG00000048799	ProperStrand	91	1	-5.6352
chr10	80492912	80492929	protein_coding	Slc39a3	utr3	ENSMUSG00000046822	NonProperStrand	2	chr18	73693111	73693138	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-12.9450
chr1	193730797	193730813	protein_coding	Slc30a1	utr5	ENSMUSG00000037434	ProperStrand	42	chr1	162965979	162965999	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-4.2737
chr1	88252835	88252888	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	chr15	79908939	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	5	-2.8658
chr5	145036652	145036671	protein_coding	Bri3	intron	ENSMUSG00000047843	ProperStrand	16	chr19	8963116	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.7073
chr7	87360530	87360547	protein_coding	Sema4b	exon	ENSMUSG00000030539	ProperStrand	54	chr7	117189933	117190017	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.5257
chr9	78023109	78023184	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr14	45997067	45997142	protein_coding	Gnpnat1	utr3	ENSMUSG00000037722	ProperStrand	5	1	-11.0065
chrX	69515828	69515845	protein_coding	Gabre	exon	ENSMUSG00000031340	NonProperStrand	3	chr1	162965981	162966016	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-9.8232
chr14	46252370	46252400	protein_coding	Ddhd1	intron	ENSMUSG00000037697	ProperStrand	2	chr1	88247816	88247876	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-12.5019
chr2	43110993	43111010	LINE	Lx6	L1	chr2Lx643110257	ProperStrand	35	chr3	88684243	88684321	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-8.3136
chr13	28851302	28851322	lincRNA	2610307P16Rik	intron	ENSMUSG00000085936	NonProperStrand	13	chr8	98269977	98270067	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	2	-13.7950
chr3	36874674	36882366	protein_coding	4932438A13Rik	exon	ENSMUSG00000037270	ProperStrand	96	chr11	97642952	97643004	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-4.8598
chr18	35098279	35098369	protein_coding	Hspa9	exon	ENSMUSG00000024359	ProperStrand	166	chr7	117189865	117189945	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-4.2394
chr9	63511481	63514000	protein_coding	Smad3	utr5	ENSMUSG00000032402	ProperStrand	12	chr10	23505549	23505623	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-10.8214
chr7	35030278	35030348	protein_coding	4931406P16Rik	exon	ENSMUSG00000066571	ProperStrand	75	chr10	110918549	110918639	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-3.0442
chr12	102942689	102942706	protein_coding	Tc2n	intron	ENSMUSG00000021187	ProperStrand	32	chr18	73693166	73693189	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-6.7675
chr15	76005537	76005553	protein_coding	Plec	exon	ENSMUSG00000022565	ProperStrand	186	chr5	108336377	108336408	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-2.7841
chr2	146125209	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	chr1	162965983	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	4	-6.6955
chr6	102015511	102015601	LINE	L1Md_F2	L1	chr6L1Md_F2102014214	NonProperStrand	1	chr6	102165727	102165817	protein_coding	Cntn3	intron	ENSMUSG00000030075	NonProperStrand	13	1	-inf
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr10	84849683	84849754	protein_coding	Btbd11	utr5	ENSMUSG00000020042	ProperStrand	13	1	-11.8280
chr11	4691477	4691565	protein_coding	Nf2	intron	ENSMUSG00000009073	ProperStrand	72	chr4	131866632	131866676	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	1	-8.7396
chr17	24858084	24858148	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr9	64143736	64143826	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-4.2055
chrX	150715706	150715723	LTR	IAPEY3-int	ERVK	chrXIAPEY3-int150714951	NonProperStrand	5	chr19	4789046	4789127	protein_coding	Rbm14	intron	ENSMUSG00000006456	ProperStrand	84	1	-17.8005
chr6	38007972	38008000	snoRNA	ENSMUSG00000088263_snoU13	.	ENSMUSG00000088263	ProperStrand	13	chr5	74489575	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	8	-inf
chr11	119207004	119207020	protein_coding	Sgsh	utr3	ENSMUSG00000005043	ProperStrand	67	chr10	23505188	23505237	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.0865
chr14	32513644	32513716	protein_coding	Ankrd28	utr3	ENSMUSG00000014496	ProperStrand	39	chr4	131866238	131866283	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-4.4791
chr1	27344518	27344609	LINE	L1_Mur3	L1	chr1L1_Mur327344470	ProperStrand	1	chr1	27344791	27344871	LINE	L1_Mur3	L1	chr1L1_Mur327344731	ProperStrand	1	1	-inf
chr15	60661083	60661099	lincRNA	9930014A18Rik	exon	ENSMUSG00000044513	ProperStrand	54	chr7	109149271	109149287	protein_coding	Numa1	exon	ENSMUSG00000066306	NonProperStrand	171	1	-11.4240
chr15	82980192	82980225	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr17	35089182	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	3	-1.8412
chr11	82613742	82613796	protein_coding	Lig3	exon	ENSMUSG00000020697	ProperStrand	34	chr7	51505224	51505280	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	3	-18.6374
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr7	28421172	28421284	protein_coding	Akt2	exon	ENSMUSG00000004056	ProperStrand	100	2	-8.0993
chr11	62416575	62416596	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr15	100358955	100358972	protein_coding	Tfcp2	exon	ENSMUSG00000009733	NonProperStrand	77	1	-8.4720
chr1	167145552	167145642	protein_coding	Tiprl	utr3	ENSMUSG00000040843	ProperStrand	5	chr11	69481344	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-13.4175
chr1	88423319	88423341	protein_coding	Ptma	utr5	ENSMUSG00000026238	ProperStrand	385	chr10	39978401	39978483	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-2.0636
chr14	103472337	103472417	protein_coding	Cln5	intron	ENSMUSG00000022125	ProperStrand	6	chr1	162965981	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-8.2222
chr10	73883418	73883436	protein_coding	Pcdh15	intron	ENSMUSG00000052613	NonProperStrand	15	chr10	127521216	127521270	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	1	-11.6102
chr19	7028588	7028688	protein_coding	Plcb3	exon	ENSMUSG00000024960	ProperStrand	111	chr19	8798753	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-3.6383
chr12	60232341	60232363	protein_coding	Ctage5	intron	ENSMUSG00000021000	ProperStrand	35	chr14	33005095	33005138	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-5.0270
chr5	120889875	120889892	protein_coding	Lhx5	intron	ENSMUSG00000029595	NonProperStrand	106	chr1	88247814	88247833	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-4.0098
chr7	127781462	127783771	protein_coding	Uqcrc2	exon	ENSMUSG00000030884	ProperStrand	26	chr8	13416894	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-8.1274
chr13	113970523	113970540	protein_coding	Gzmk	intron	ENSMUSG00000042385	ProperStrand	14	chr14	52829532	52829569	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-11.1578
chr2	119063728	119063830	protein_coding	Spint1	exon	ENSMUSG00000027315	ProperStrand	17	chr12	106269282	106269382	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	4	-19.6829
chr2	76471660	76471676	protein_coding	Prkra	exon	ENSMUSG00000002731	NonProperStrand	65	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-10.2673
chr8	73998512	73998602	protein_coding	Dda1	utr3	ENSMUSG00000074247	ProperStrand	11	chr11	68886928	68887008	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-7.5122
chr4	129211950	129219850	protein_coding	Hdac1	exon	ENSMUSG00000028800	ProperStrand	49	chr4	56910495	56910595	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	6	-inf
chr13	9136469	9143021	protein_coding	Larp4b	exon	ENSMUSG00000033499	ProperStrand	53	chr19	8799026	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-6.0768
chr14	76247066	76247156	protein_coding	Tpt1	exon	ENSMUSG00000060126	ProperStrand	236	chr15	34370546	34370626	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-1.2839
chr3	101394411	101394512	protein_coding	Atp1a1	exon	ENSMUSG00000033161	ProperStrand	316	chr18	35714247	35714292	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	18	-inf
chr12	110892851	110892904	snoRNA	ENSMUSG00000064621_AF357355	.	ENSMUSG00000064621	ProperStrand	60	chr3	123210906	123210972	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	4	-7.8481
chr1	24621360	24621434	protein_coding	Gm10925	intron	ENSMUSG00000090378	ProperStrand	320	chr8	73419660	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	6	-6.1029
chr7	54442433	54442513	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	chr11	87240292	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	1	-7.4180
chr17	26025115	26025205	protein_coding	Rab40c	intron	ENSMUSG00000025730	ProperStrand	5	chr18	35714196	35714276	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-8.4504
chr18	21539397	21539433	snRNA	ENSMUSG00000070226_U6	.	ENSMUSG00000070226	ProperStrand	2	chr14	52829459	52829559	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	2	-inf
chr6	83745105	83745121	protein_coding	Nagk	utr5	ENSMUSG00000034744	ProperStrand	10	chr7	116664871	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-5.9693
chr16	33730602	33730669	protein_coding	Heg1	exon	ENSMUSG00000075254	ProperStrand	19	chr5	130300497	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.6362
chr7	116664101	116665149	protein_coding	Rpl27a	exon	ENSMUSG00000046364	ProperStrand	149	chr2	130210562	130210652	pseudogene	Gm14044	.	ENSMUSG00000083483	ProperStrand	1	1	-inf
chr4	129989642	129991222	protein_coding	Fabp3	exon	ENSMUSG00000028773	ProperStrand	93	chr2	158185617	158185666	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-5.6241
chr15	74392750	74392768	protein_coding	Bai1	intron	ENSMUSG00000034730	NonProperStrand	56	chr1	193420864	193426211	protein_coding	Ints7	exon	ENSMUSG00000037461	ProperStrand	108	1	-12.2715
chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	chr9	64024526	64024568	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	1	-0.9907
chr4	134883080	134884950	protein_coding	Srrm1	exon	ENSMUSG00000028809	ProperStrand	142	chr15	34370562	34370642	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-2.0475
chr1	135468284	135468335	SINE	B1_Mur2	Alu	chr1B1_Mur2135468238	ProperStrand	32	chr9	40611909	40612016	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	32	-inf
chr17	46709689	46710444	protein_coding	Ptk7	exon	ENSMUSG00000023972	ProperStrand	101	chr4	131866187	131866267	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-2.7263
chr2	90235314	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	100414998	100415014	protein_coding	Ttc25	exon	ENSMUSG00000006784	NonProperStrand	119	1	-3.1884
chr17	32198624	32198726	protein_coding	Rrp1b	utr3	ENSMUSG00000058392	ProperStrand	38	chr4	131865891	131865939	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	6	-14.7269
chr11	116402925	116402982	protein_coding	Ube2o	exon	ENSMUSG00000020802	ProperStrand	134	chr13	51743581	51743660	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-5.2821
chr16	23111392	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	chr7	67123731	67123759	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	7	-0.9383
chr6	54379743	54379760	lincRNA	9130019P16Rik	exon	ENSMUSG00000073067	ProperStrand	255	chr4	98403805	98403825	protein_coding	L1td1	exon	ENSMUSG00000087166	ProperStrand	43	1	-11.0842
chr2	3328145	3328164	protein_coding	Meig1	intron	ENSMUSG00000026650	ProperStrand	18	chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	1	-12.7192
chr2	130109497	130109513	protein_coding	Idh3b	exon	ENSMUSG00000027406	ProperStrand	146	chr19	8963030	8963082	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-0.9646
chr11	118900007	118900025	protein_coding	Cbx8	exon	ENSMUSG00000025578	ProperStrand	95	chr16	23110828	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	9	-5.1638
chr18	9315987	9316087	protein_coding	Ccny	utr3	ENSMUSG00000024286	ProperStrand	23	chr4	131865913	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.4190
chr15	27955395	27955411	protein_coding	Trio	utr5	ENSMUSG00000022263	NonProperStrand	20	chr4	131865855	131865978	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.6810
chr15	88786458	88786475	protein_coding	Mlc1	utr3	ENSMUSG00000035805	ProperStrand	10	chr2	179892632	179893761	protein_coding	Osbpl2	exon	ENSMUSG00000039050	ProperStrand	6	1	-19.4901
chr16	98284319	98284361	LINE	L1_Mus1	L1	chr16L1_Mus198283327	ProperStrand	23	chr4	131908232	131908787	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	6	-16.8371
chr3	88985867	88985923	protein_coding	Scamp3	exon	ENSMUSG00000028049	ProperStrand	32	chr18	33954866	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	5	-18.4484
chr14	59842061	59843483	protein_coding	Rcbtb1	exon	ENSMUSG00000035469	ProperStrand	39	chr6	115757997	115758077	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-6.3206
chr16	58675425	58675452	protein_coding	Cpox	exon	ENSMUSG00000022742	ProperStrand	7	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	1	-11.4366
chr7	133766845	133766891	protein_coding	Nupr1	utr3	ENSMUSG00000030717	ProperStrand	2	chr11	69481335	69481429	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-10.4764
mmu-miR-1949	5	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chrX	91780944	91781208	protein_coding	Maged1	utr3	ENSMUSG00000025151	ProperStrand	43	3	-19.0168
chr9	64023701	64023746	snoRNA	ENSMUSG00000064918_SNORD18	.	ENSMUSG00000064918	ProperStrand	370	chr10	90581195	90581286	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-1.5995
chr5	65663649	65663674	protein_coding	Rfc1	exon	ENSMUSG00000029191	ProperStrand	53	chr15	34370545	34370584	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-3.7794
chr11	6520333	6520395	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	chr8	113362493	113362512	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	4	-12.3667
chr4	86502125	86502209	protein_coding	Rps6	exon	ENSMUSG00000028495	ProperStrand	263	chr1	162967514	162967566	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	7	-10.2798
chr12	102827418	102827437	protein_coding	Catsperb	intron	ENSMUSG00000047014	ProperStrand	1	chr15	79913297	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-inf
chr2	68946921	68946997	protein_coding	Lass6	utr3	ENSMUSG00000027035	ProperStrand	32	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-7.9443
chr2	179322379	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr6	88435849	88435865	protein_coding	Ruvbl1	exon	ENSMUSG00000030079	NonProperStrand	54	1	-11.4242
chr2	28368857	28368876	protein_coding	Ralgds	utr5	ENSMUSG00000026821	NonProperStrand	60	chr6	66847318	66847336	protein_coding	Gng12	intron	ENSMUSG00000036402	ProperStrand	6	1	-17.9623
chr7	30231494	30231593	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	chr18	63238393	63238411	protein_coding	Fam38b	exon	ENSMUSG00000041482	NonProperStrand	50	1	-9.2128
chr19	6400467	6400533	protein_coding	Rasgrp2	utr5	ENSMUSG00000032946	ProperStrand	6	chr18	35730858	35730931	protein_coding	Matr3	intron	ENSMUSG00000037236	ProperStrand	90	1	-17.1615
chr11	120148960	120148976	protein_coding	Bahcc1	exon	ENSMUSG00000039741	NonProperStrand	268	chr8	124431451	124431472	protein_coding	Slc7a5	exon	ENSMUSG00000040010	ProperStrand	166	1	-8.2768
chr5	138187044	138187062	protein_coding	Tsc22d4	utr5	ENSMUSG00000029723	ProperStrand	24	chr17	33813583	33813601	protein_coding	Hnrnpm	intron	ENSMUSG00000059208	NonProperStrand	8	1	-18.7770
chr3	78885106	78885125	protein_coding	Rapgef2	exon	ENSMUSG00000062232	NonProperStrand	6	chr19	8799851	8799891	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-9.6428
chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	chr9	111174369	111174399	protein_coding	Epm2aip1	utr5	ENSMUSG00000046785	ProperStrand	3	1	-16.2657
chr10	83990317	83990345	protein_coding	Ckap4	exon	ENSMUSG00000046841	ProperStrand	60	chr8	73419658	73419775	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.1303
chr5	108332834	108332869	protein_coding	Rpl5	exon	ENSMUSG00000058558	ProperStrand	235	chr18	35716789	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-1.6447
chr19	5685588	5685605	protein_coding	Pcnxl3	exon	ENSMUSG00000054874	ProperStrand	96	chr2	32818803	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-4.5621
chr12	101759078	101759095	Low_complexity	GC_rich	Low_complexity	chr12GC_rich101758901	ProperStrand	34	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-10.5145
chr2	105012751	105012769	protein_coding	Wt1	utr3	ENSMUSG00000016458	NonProperStrand	338	chr14	76247711	76247789	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-1.2510
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr13	12682025	12682060	snoRNA	ENSMUSG00000065158_SNORA73	.	ENSMUSG00000065158	ProperStrand	10	1	-12.5902
chr1	193048571	193048590	lincRNA	D730003I15Rik	intron	ENSMUSG00000073478	NonProperStrand	1	chr17	24857716	24857777	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-inf
chr9	21637355	21637371	protein_coding	Dock6	exon	ENSMUSG00000032198	ProperStrand	155	chr15	50721481	50721539	protein_coding	Trps1	utr5	ENSMUSG00000038679	ProperStrand	14	3	-inf
chr2	25128155	25128196	protein_coding	Anapc2	exon	ENSMUSG00000026965	ProperStrand	15	chr7	116663634	116663724	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-12.2342
chr18	34963444	34963529	protein_coding	Kdm3b	exon	ENSMUSG00000038773	ProperStrand	80	chr9	15119973	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-6.6820
chr7	4745745	4746026	protein_coding	Rpl28	exon	ENSMUSG00000030432	ProperStrand	220	chr3	123210854	123210891	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-0.9322
chr4	116946044	116991036	protein_coding	Rnf220	intron	ENSMUSG00000028677	ProperStrand	131	chr16	23111695	23111796	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-1.6718
chrX	103043048	103046377	protein_coding	Atrx	exon	ENSMUSG00000031229	ProperStrand	54	chr15	96249300	96249348	protein_coding	Scaf11	exon	ENSMUSG00000033228	ProperStrand	37	1	-14.5009
chr11	78127436	78127719	protein_coding	Spag5	exon	ENSMUSG00000002055	ProperStrand	49	chr10	23505152	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.5211
chr18	44555634	44555651	protein_coding	Dcp2	exon	ENSMUSG00000024472	ProperStrand	44	chr1	89673719	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	2	-6.4849
chr5	65502927	65502975	protein_coding	Klhl5	intron	ENSMUSG00000054920	ProperStrand	5	chr14	31932010	31932026	protein_coding	2010107H07Rik	intron	ENSMUSG00000058351	ProperStrand	4	1	-20.9004
chr3	87719406	87719506	protein_coding	Hdgf	utr3	ENSMUSG00000004897	ProperStrand	117	chr16	23111689	23111759	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-0.9553
chr17	88374561	88374579	protein_coding	Msh6	exon	ENSMUSG00000005370	ProperStrand	150	chr5	141090405	141090422	protein_coding	Lfng	exon	ENSMUSG00000029570	NonProperStrand	92	1	-10.6155
chr11	68716790	68717892	protein_coding	Rpl26	exon	ENSMUSG00000060938	ProperStrand	130	chr16	23110840	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	12	-5.8812
mmu-miR-1949	5	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr1	162967115	162967164	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	3	-8.9714
chr4	107846716	107849713	protein_coding	Echdc2	exon	ENSMUSG00000028601	ProperStrand	2	chr16	23110544	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-9.6327
chr9	15118322	15118361	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	chr12	65837469	65837520	snoRNA	ENSMUSG00000077703_SNORA17	.	ENSMUSG00000077703	ProperStrand	2	1	-10.7700
chr18	63823925	63823948	protein_coding	Txnl1	utr3	ENSMUSG00000024583	ProperStrand	7	chr18	35714157	35714257	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-7.7147
chr7	106628075	106628104	snoRNA	ENSMUSG00000064966_Snord15b	.	ENSMUSG00000064966	ProperStrand	74	chr2	91436229	91436260	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	2	-11.3836
chr4	139019502	139019518	protein_coding	Ubr4	exon	ENSMUSG00000066036	NonProperStrand	14	chr19	8963085	8963175	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	4	-16.0180
chr14	52753487	52753525	protein_coding	Rpgrip1	exon	ENSMUSG00000057132	ProperStrand	3	chr16	23110911	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr1	187090901	187090917	protein_coding	Rab3gap2	exon	ENSMUSG00000039318	ProperStrand	41	chr11	77995219	77995239	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-6.9382
chrX	34624018	34625145	protein_coding	Rpl39	exon	ENSMUSG00000079641	ProperStrand	37	chr4	131908689	131908771	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	8	-17.7996
chr4	140552608	140552698	protein_coding	Atp13a2	exon	ENSMUSG00000036622	ProperStrand	39	chr4	131908776	131908866	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-3.4116
chr5	8008106	8008122	LTR	MERVK26-int	ERVK	chr5MERVK26-int8007987	ProperStrand	1	chr6	71832629	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-inf
chr6	108163262	108164201	protein_coding	Itpr1	utr5	ENSMUSG00000030102	ProperStrand	94	chr7	106494694	106494774	protein_coding	Serpinh1	exon	ENSMUSG00000070436	ProperStrand	9	4	-19.1475
chr9	72578761	72579080	protein_coding	Nedd4	exon	ENSMUSG00000032216	ProperStrand	308	chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	1	-5.5914
chr6	115758051	115758132	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr4	116827794	116827822	snoRNA	ENSMUSG00000064751_SNORD46	.	ENSMUSG00000064751	ProperStrand	132	3	-9.6350
chr1	184419140	184420115	protein_coding	Capn2	exon	ENSMUSG00000026509	NonProperStrand	2	chr18	35716810	35716834	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	NonProperStrand	45	1	-19.7664
chr1	191058376	191058394	protein_coding	Kcnk2	intron	ENSMUSG00000037624	ProperStrand	56	chr14	77424372	77424388	protein_coding	9030625A04Rik	utr3	ENSMUSG00000044350	NonProperStrand	152	1	-11.5871
chr1	88252836	88252898	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	chr1	162967115	162967137	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	1	-2.3046
chr11	58791648	58791738	protein_coding	Trim11	utr5	ENSMUSG00000020455	ProperStrand	43	chr4	131865856	131865936	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.3073
chr6	48366194	48366294	protein_coding	Krba1	exon	ENSMUSG00000042810	ProperStrand	7	chr11	97642952	97643001	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-6.6269
chr5	139881278	139881368	protein_coding	C130050O18Rik	utr5	ENSMUSG00000044092	ProperStrand	1	chr5	139880997	139881077	protein_coding	3110082I17Rik	intron	ENSMUSG00000053553	NonProperStrand	2	1	-inf
chr1	88252836	88252894	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	chr2	26494708	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	11	-1.3844
chr3	96218365	96218465	misc_RNA	Telomerase-vert	.	ENSMUSG00000064796	ProperStrand	443	chr13	21485783	21485827	protein_coding	Zkscan3	utr3	ENSMUSG00000021327	ProperStrand	9	1	-13.1973
chr11	102266379	102267082	protein_coding	Slc25a39	exon	ENSMUSG00000018677	ProperStrand	35	chr5	130300420	130300500	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.4721
chr18	63908609	63908625	protein_coding	Wdr7	intron	ENSMUSG00000040560	NonProperStrand	180	chr5	147646734	147646778	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	1	-5.7856
chr7	125709759	125709787	protein_coding	Tmc7	exon	ENSMUSG00000042246	ProperStrand	3	chr17	24857725	24857815	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-8.3442
chr17	24869755	24869771	protein_coding	Rpl3l	utr5	ENSMUSG00000002500	NonProperStrand	56	chr4	116826699	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-6.9185
chr8	73437506	73437596	protein_coding	Mtap1s	exon	ENSMUSG00000019261	ProperStrand	60	chr3	123210901	123210981	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.0663
chr9	98765854	98765954	protein_coding	2410012M07Rik	exon	ENSMUSG00000090470	ProperStrand	31	chr16	23111403	23111446	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.2771
chr14	11815940	11815957	protein_coding	Fhit	intron	ENSMUSG00000060579	ProperStrand	32	chr3	123210854	123210928	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.1535
chr11	55302591	55302643	protein_coding	G3bp1	exon	ENSMUSG00000018583	ProperStrand	106	chr8	73989576	73989612	protein_coding	Mrpl34	utr3	ENSMUSG00000034880	ProperStrand	8	2	-19.6939
chr1	173433208	173433255	protein_coding	B930036N10Rik	utr3	ENSMUSG00000091993	ProperStrand	150	chr7	116664818	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.1367
chr17	35822057	35822257	protein_coding	Ddr1	exon	ENSMUSG00000003534	ProperStrand	129	chr7	116663661	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.3113
chr14	76247079	76247163	protein_coding	Tpt1	exon	ENSMUSG00000060126	ProperStrand	236	chr17	24856646	24856736	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-3.7885
chr3	31009131	31009236	protein_coding	Skil	intron	ENSMUSG00000027660	ProperStrand	23	chr7	117190020	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-5.1578
chr1	173288109	173288150	protein_coding	Pfdn2	exon	ENSMUSG00000006412	ProperStrand	9	chr4	122968612	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-10.1405
chr17	46703071	46703119	protein_coding	Ptk7	exon	ENSMUSG00000023972	ProperStrand	101	chr7	29136536	29136626	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-2.8719
chr7	34249571	34249661	LINE	L1_Mus3	L1	chr7L1_Mus334247536	ProperStrand	1	chrX	150813699	150813789	LINE	L1_Mm	L1	chrXL1_Mm150811045	ProperStrand	1	1	-inf
chr5	139575113	139575131	protein_coding	Prkar1b	intron	ENSMUSG00000025855	NonProperStrand	5	chr8	10924953	10924969	protein_coding	3930402G23Rik	utr3	ENSMUSG00000038917	ProperStrand	13	1	-19.9979
chr4	155547177	155547224	protein_coding	Agrn	exon	ENSMUSG00000041936	ProperStrand	175	chr19	8799610	8799644	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	2	-7.7414
chr5	74489237	74489317	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr4	32800757	32800847	protein_coding	Mdn1	exon	ENSMUSG00000058006	ProperStrand	184	16	-inf
chr5	122909507	122909524	protein_coding	Atp2a2	exon	ENSMUSG00000029467	NonProperStrand	9	chr2	167433883	167433983	protein_coding	Gm20431	utr3	ENSMUSG00000089739	ProperStrand	81	1	-16.5754
chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	chr7	117166722	117166746	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-1.9184
chr11	50109011	50109081	protein_coding	Canx	utr3	ENSMUSG00000020368	ProperStrand	296	chr18	35714165	35714255	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-0.9166
chr1	182507902	182507992	protein_coding	Parp1	intron	ENSMUSG00000026496	ProperStrand	227	chr11	69481337	69481417	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-1.0802
chr7	148414686	148414703	protein_coding	Phrf1	utr5	ENSMUSG00000038611	NonProperStrand	4	chr10	23505150	23505215	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-6.2798
chr15	10504979	10504995	protein_coding	Rai14	exon	ENSMUSG00000022246	ProperStrand	180	chr7	116663712	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-0.8820
chr12	109924314	109924649	protein_coding	Evl	exon	ENSMUSG00000021262	ProperStrand	9	chr1	72272818	72272908	snRNA	ENSMUSG00000075752_U2	.	ENSMUSG00000075752	ProperStrand	535	1	-12.8204
chr12	55847755	55847773	protein_coding	Snx6	utr3	ENSMUSG00000005656	ProperStrand	9	chr12	70413651	70415416	protein_coding	Nemf	exon	ENSMUSG00000020982	ProperStrand	77	1	-16.6588
chr14	21225587	21225603	protein_coding	Ttc18	intron	ENSMUSG00000039543	ProperStrand	2	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-8.7800
chr9	15120980	15121115	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	chr16	23111372	23111465	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	12	-4.3377
chrX	35773691	35773745	protein_coding	Lamp2	utr3	ENSMUSG00000016534	ProperStrand	19	chr17	35088957	35089022	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-8.1695
chr8	55607156	55607214	antisense	Spcs3	.	ENSMUSG00000054408	ProperStrand	30	chr18	33954829	33954895	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-4.8204
chr1	21001122	21001190	protein_coding	Tram2	intron	ENSMUSG00000041779	ProperStrand	13	chr10	23505152	23505203	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.8218
chr4	46554810	46554826	protein_coding	Coro2a	exon	ENSMUSG00000028337	NonProperStrand	24	chr5	108336363	108336412	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-6.6878
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr4	7870149	7870165	LTR	RLTR25B	ERVK	chr4RLTR25B7869609	NonProperStrand	3	1	-inf
chr9	61221096	61261831	protein_coding	Tle3	exon	ENSMUSG00000032280	ProperStrand	88	chr16	23111391	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-1.6024
chrX	148238059	148359285	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	chr4	131908236	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	15	-5.0332
chr1	168239525	168239541	protein_coding	Ildr2	exon	ENSMUSG00000040612	ProperStrand	103	chr2	26494803	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.1737
chr18	10052129	10052153	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr4	76614453	76614470	protein_coding	Ptprd	intron	ENSMUSG00000028399	ProperStrand	198	1	-6.4282
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr8	13876177	13876226	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	2	-2.8962
chr10	79202086	79202149	protein_coding	Polrmt	exon	ENSMUSG00000020329	ProperStrand	11	chr19	24917351	24917370	protein_coding	Pgm5	intron	ENSMUSG00000041731	ProperStrand	8	1	-19.0255
chr15	6658433	6719269	protein_coding	Rictor	exon	ENSMUSG00000050310	ProperStrand	21	chr16	23111382	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-10.5270
chr4	43505886	43505931	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr13	89842387	89842422	protein_coding	Vcan	intron	ENSMUSG00000021614	ProperStrand	17	1	-5.4753
chr4	124356218	124356249	protein_coding	Utp11l	intron	ENSMUSG00000028907	ProperStrand	1	chr1	9932569	9932626	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-inf
chr17	79164726	79225189	protein_coding	Heatr5b	exon	ENSMUSG00000039414	ProperStrand	27	chr16	23110965	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	8	-14.0484
chr16	34142195	34142212	protein_coding	Kalrn	intron	ENSMUSG00000061751	NonProperStrand	52	chr10	23505152	23505219	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.4343
chr2	130219832	130219922	protein_coding	Cpxm1	exon	ENSMUSG00000027408	ProperStrand	4	chr14	76247740	76247820	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-9.7427
chr12	3968611	3968627	protein_coding	Efr3b	exon	ENSMUSG00000020658	ProperStrand	142	chr9	15119993	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	2	-9.0739
chr7	119090780	119090816	snRNA	ENSMUSG00000065751_U2	.	ENSMUSG00000065751	ProperStrand	3	chr1	72272872	72272934	snRNA	ENSMUSG00000075752_U2	.	ENSMUSG00000075752	ProperStrand	535	3	-inf
chr19	46668939	46668956	protein_coding	Sfxn2	intron	ENSMUSG00000025036	ProperStrand	13	chr11	69481365	69481479	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-6.1585
chr8	122480639	122480729	protein_coding	Usp10	utr3	ENSMUSG00000031826	ProperStrand	98	chr3	88497863	88497943	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-6.4867
chr7	13511833	13511982	protein_coding	Rps5	exon	ENSMUSG00000012848	ProperStrand	108	chr16	23110457	23110547	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-2.8478
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	3	-5.7098
chr5	136437931	136437973	protein_coding	Srcrb4d	intron	ENSMUSG00000029699	ProperStrand	9	chr5	108336394	108336494	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	4	-20.1269
chr17	46713321	46713486	protein_coding	Ptk7	exon	ENSMUSG00000023972	ProperStrand	101	chr6	34439362	34439378	protein_coding	Bpgm	intron	ENSMUSG00000038871	NonProperStrand	2	1	-inf
chr2	160191558	160191574	protein_coding	Mafb	exon	ENSMUSG00000074622	ProperStrand	31	chr16	23111460	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.2771
chr9	45198928	45199653	protein_coding	Fxyd6	exon	ENSMUSG00000066705	NonProperStrand	108	chr1	162965530	162965593	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.2505
chr17	27699498	27699523	protein_coding	Hmga1	utr3	ENSMUSG00000046711	ProperStrand	180	chr11	99885311	99885327	protein_coding	Krt33b	exon	ENSMUSG00000057723	NonProperStrand	352	1	-7.5746
chr11	51203129	51203146	protein_coding	Col23a1	intron	ENSMUSG00000063564	NonProperStrand	8	chr4	131865856	131865879	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.4974
chr6	13820285	13820356	protein_coding	2610001J05Rik	utr3	ENSMUSG00000052419	ProperStrand	6	chr18	35716813	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-10.9507
chr7	73193848	73193938	protein_coding	Pcsk6	utr3	ENSMUSG00000030513	ProperStrand	32	chr7	116663694	116663758	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.6411
chr3	96434242	96434448	protein_coding	Rbm8a	exon	ENSMUSG00000038374	ProperStrand	3	chr15	79913288	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-9.8112
chr12	72079800	72084355	protein_coding	Psma3	exon	ENSMUSG00000060073	ProperStrand	20	chr10	110918639	110918694	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-9.1457
chr8	131234274	131234364	protein_coding	Itgb1	exon	ENSMUSG00000025809	ProperStrand	35	chr18	35716764	35716844	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.1046
chr2	179322380	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr3	84935851	84935868	protein_coding	Arfip1	intron	ENSMUSG00000074513	ProperStrand	49	1	-11.6202
chr2	31924012	31924028	protein_coding	Fam78a	utr3	ENSMUSG00000050592	NonProperStrand	340	chr15	79908929	79909019	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	2	-4.0453
chr16	37777389	37777407	protein_coding	Fstl1	exon	ENSMUSG00000022816	ProperStrand	179	chr19	8799024	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-3.7386
chr17	36065155	36065198	protein_coding	Ppp1r10	exon	ENSMUSG00000039220	ProperStrand	45	chr9	58049178	58049773	protein_coding	Islr2	utr5	ENSMUSG00000051243	ProperStrand	14	1	-16.9632
chr19	6336753	6336789	protein_coding	Men1	exon	ENSMUSG00000024947	ProperStrand	24	chr10	110918548	110918639	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	9	-20.6975
chr13	93356082	93356099	LTR	RLTR27	ERVK	chr13RLTR2793355803	ProperStrand	1	chr7	29136525	29136632	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-inf
chr11	45723144	45723160	protein_coding	Clint1	utr3	ENSMUSG00000006169	NonProperStrand	273	chr3	95980361	95980407	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-3.9239
chr2	90235293	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	136101981	136101997	protein_coding	Luzp1	utr3	ENSMUSG00000001089	NonProperStrand	47	1	-4.9327
chr16	20178574	20178639	protein_coding	Yeats2	intron	ENSMUSG00000041215	ProperStrand	21	chr11	69481335	69481417	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.1963
chr8	63390002	63390079	protein_coding	Clcn3	utr3	ENSMUSG00000004319	ProperStrand	93	chr2	26493366	26493393	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-2.9448
chr11	78313939	78313956	protein_coding	Vtn	exon	ENSMUSG00000017344	ProperStrand	188	chr7	134904833	134904859	protein_coding	Fbxl19	exon	ENSMUSG00000030811	ProperStrand	15	1	-13.8435
chr1	90798323	90798340	LTR	MTD	MaLR	chr1MTD90798026	NonProperStrand	1	chr11	106362637	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-inf
chr2	179960492	179960509	protein_coding	Lama5	utr5	ENSMUSG00000015647	ProperStrand	365	chr10	23505554	23505627	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-4.0357
chr10	80361030	80361977	protein_coding	Tmprss9	exon	ENSMUSG00000059406	ProperStrand	1	chr19	8963089	8963169	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-inf
chr13	101705554	101705644	LINE	L1Md_A	L1	chr13L1Md_A101705043	NonProperStrand	2	chr1	117866229	117866319	protein_coding	Cntnap5a	intron	ENSMUSG00000070695	ProperStrand	11	2	-inf
chr5	74489215	74489305	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr7	129312462	129312618	protein_coding	Plk1	exon	ENSMUSG00000030867	ProperStrand	146	1	-3.9167
chr1	162967490	162967561	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	chr12	110918154	110918221	snoRNA	ENSMUSG00000065749_AF357428	.	ENSMUSG00000065749	ProperStrand	218	2	-2.5380
chr7	148195720	148195772	protein_coding	Ifitm3	exon	ENSMUSG00000025492	ProperStrand	12	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	5	-20.0714
chr8	67206588	67206648	protein_coding	Sc4mol	exon	ENSMUSG00000031604	ProperStrand	24	chr7	117190020	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	4	-15.9857
chr14	64081496	64081513	protein_coding	Fam167a	utr3	ENSMUSG00000035095	ProperStrand	80	chr11	6428089	6428163	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-4.6897
chr10	127428422	127428438	protein_coding	Hsd17b6	exon	ENSMUSG00000025396	NonProperStrand	68	chr19	8963027	8963174	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.0686
chr14	51427313	51427393	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr9	60719432	60719522	protein_coding	Uaca	exon	ENSMUSG00000034485	ProperStrand	109	1	-6.0289
chr15	36529195	36529228	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chrX	71517859	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	5	-8.4034
chr19	8800084	8800113	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	NonProperStrand	4	chr3	108357255	108357359	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	NonProperStrand	17	2	-inf
chr7	26111444	26111511	protein_coding	Megf8	exon	ENSMUSG00000045039	ProperStrand	100	chr6	115758102	115758132	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-4.4855
chr8	39436369	39436386	protein_coding	Sgcz	intron	ENSMUSG00000039539	ProperStrand	46	chr17	35089181	35089228	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-6.0071
chr13	58228811	58228881	protein_coding	Hnrnpa0	exon	ENSMUSG00000007836	ProperStrand	110	chr8	129468746	129468762	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-3.2840
chr11	98018268	98018358	protein_coding	Med1	exon	ENSMUSG00000018160	ProperStrand	23	chr2	26493426	26493506	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-5.5917
chr16	31429208	31429225	protein_coding	Bdh1	intron	ENSMUSG00000046598	ProperStrand	17	chr6	125071744	125071885	snoRNA	ENSMUSG00000088208_SCARNA11	.	ENSMUSG00000088208	ProperStrand	113	5	-inf
chr18	60975755	60975845	protein_coding	Tcof1	utr3	ENSMUSG00000024613	ProperStrand	68	chr13	49779667	49779747	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-6.7650
chr2	121587713	121587730	protein_coding	Frmd5	intron	ENSMUSG00000027238	ProperStrand	35	chr11	48614366	48614434	snoRNA	ENSMUSG00000064500_SNORD95	.	ENSMUSG00000064500	ProperStrand	100	2	-inf
chr12	87365914	87365976	protein_coding	Ttll5	intron	ENSMUSG00000012609	ProperStrand	23	chr1	84654219	84654237	protein_coding	Dner	intron	ENSMUSG00000036766	NonProperStrand	1	1	-inf
chr6	88458644	88458705	protein_coding	Sec61a1	exon	ENSMUSG00000030082	ProperStrand	46	chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	1	-10.0234
chr3	121971824	121971914	protein_coding	Gclm	utr3	ENSMUSG00000028124	ProperStrand	31	chr6	149275885	149275965	protein_coding	2810474O19Rik	exon	ENSMUSG00000032712	ProperStrand	70	14	-19.3690
chr9	103401280	103401296	protein_coding	Tmem108	exon	ENSMUSG00000042757	NonProperStrand	323	chr19	8798484	8798512	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-2.1407
chr5	136386826	136386930	protein_coding	Ywhag	utr3	ENSMUSG00000051391	ProperStrand	142	chr4	131865913	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.3527
chr13	22098354	22098371	protein_coding	Prss16	intron	ENSMUSG00000006179	ProperStrand	78	chr11	106362609	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-6.8829
chr4	138731342	138731358	antisense	Gm16287	.	ENSMUSG00000073739	NonProperStrand	7	chrX	68694288	68703789	protein_coding	Cd99l2	exon	ENSMUSG00000035776	ProperStrand	16	1	-inf
chr4	128727781	128727871	lincRNA	1700086P04Rik	exon	ENSMUSG00000085085	ProperStrand	5	chr7	116663636	116663716	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	5	-inf
mmu-miR-690	2	21	miRNA	mmu-miR-690	.	mmu-miR-690	ProperStrand	63	chr11	69483197	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.3670
chr7	29105358	29107046	protein_coding	Supt5h	exon	ENSMUSG00000003435	ProperStrand	123	chr11	97546405	97546421	protein_coding	Mllt6	utr3	ENSMUSG00000038437	ProperStrand	110	1	-10.6546
chr14	58695284	58695301	protein_coding	Fgf9	intron	ENSMUSG00000021974	ProperStrand	11	chr11	62416578	62416637	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-8.5772
chr8	86178100	86178164	protein_coding	Gipc1	intron	ENSMUSG00000019433	ProperStrand	60	chr2	158185592	158185653	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-6.4859
chr18	10052129	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr13	97050603	97050620	SINE	B4A	B4	chr13B4A97050317	ProperStrand	12	1	-12.0801
chr12	110888918	110888951	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr19	5800166	5800276	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	1	-3.0845
chr18	34880002	34880019	protein_coding	Gfra3	utr5	ENSMUSG00000024366	ProperStrand	41	chr11	62416600	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-9.6393
chr13	74494656	74494673	protein_coding	Ccdc127	utr3	ENSMUSG00000021578	NonProperStrand	54	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	5	-11.5374
chr17	24751397	24751419	protein_coding	Tsc2	exon	ENSMUSG00000002496	ProperStrand	27	chr7	116664794	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	4	-13.1810
chr11	78085760	78085850	protein_coding	2610507B11Rik	exon	ENSMUSG00000010277	ProperStrand	246	chr17	13115655	13115701	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	8	-19.5794
chr1	42755254	42755270	protein_coding	Pou3f3	exon	ENSMUSG00000045515	NonProperStrand	117	chr19	8800355	8800420	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-2.3491
chr4	123163659	123163982	protein_coding	Macf1	exon	ENSMUSG00000028649	ProperStrand	320	chr9	78327700	78327748	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-3.1467
chr3	104764495	104764511	protein_coding	Wnt2b	utr5	ENSMUSG00000027840	NonProperStrand	50	chr9	120039622	120039658	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.6542
chr15	99650254	99650334	protein_coding	Lima1	exon	ENSMUSG00000023022	ProperStrand	159	chr2	22445014	22445105	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	37	-inf
chr19	8798755	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	chr4	3762270	3762293	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	3	-4.2754
chr7	4873360	4873450	protein_coding	Zfp628	exon	ENSMUSG00000074406	ProperStrand	12	chr2	144087370	144087450	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-9.8053
chr18	76468161	76468191	DNA	URR1B	MER1_type	chr18URR1B76468105	NonProperStrand	3	chr8	73419657	73419729	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-inf
chr4	117304981	117304998	protein_coding	Eri3	intron	ENSMUSG00000033423	NonProperStrand	1	chr11	69483211	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-inf
chr11	116535914	116535982	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr1	88247750	88247876	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	6	-1.5876
chr5	74489294	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr13	96100591	96100691	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	1	-1.0688
chr13	22132883	22132983	protein_coding	Hist1h4i	exon	ENSMUSG00000060639	ProperStrand	8	chr11	6428035	6428082	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-7.1562
chr13	34219205	34219259	protein_coding	Tubb2b	utr3	ENSMUSG00000045136	ProperStrand	49	chr7	148634748	148634835	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-7.2958
chr2	105512759	105512775	protein_coding	Pax6	utr5	ENSMUSG00000027168	NonProperStrand	1	chr9	15118245	15118322	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-inf
chr18	12172461	12172477	protein_coding	6030446N20Rik	intron	ENSMUSG00000049411	ProperStrand	235	chr11	6428043	6428088	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.0302
chr4	107716543	107716609	protein_coding	Scp2	utr3	ENSMUSG00000028603	ProperStrand	23	chr17	24857730	24857820	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.0279
chr2	167836656	167836680	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	chr9	75062913	75062932	protein_coding	Myo5a	exon	ENSMUSG00000034593	ProperStrand	89	1	-11.3404
chr11	6258072	6258110	SINE	B2_Mm1t	B2	chr11B2_Mm1t6257997	ProperStrand	5	chr9	48841813	48841873	protein_coding	Usp28	intron	ENSMUSG00000032267	ProperStrand	63	5	-inf
chr11	48614367	48614434	snoRNA	ENSMUSG00000064500_SNORD95	.	ENSMUSG00000064500	ProperStrand	100	chr19	8963027	8963083	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-2.7675
chr15	100406472	100406489	protein_coding	Pou6f1	utr3	ENSMUSG00000009739	NonProperStrand	4	chr7	116664823	116664913	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-7.9535
chr3	87689184	87689203	protein_coding	Prcc	exon	ENSMUSG00000004895	ProperStrand	38	chr3	34549334	34549412	protein_coding	Sox2	utr5	ENSMUSG00000074637	ProperStrand	299	1	-11.0155
chrX	48720135	48720225	LTR	ORR1C2	MaLR	chrXORR1C248720063	ProperStrand	1	chrX	48719967	48720047	SINE	B1_Mus1	Alu	chrXB1_Mus148719924	NonProperStrand	1	1	-inf
chr9	72596722	72596750	protein_coding	Nedd4	utr3	ENSMUSG00000032216	ProperStrand	308	chr12	109460710	109460726	protein_coding	Ccdc85c	intron	ENSMUSG00000084883	ProperStrand	157	1	-8.1112
chr15	81744146	81744200	protein_coding	Aco2	exon	ENSMUSG00000022477	ProperStrand	237	chr2	26768393	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-3.0137
chr6	51425318	51428482	protein_coding	Cbx3	exon	ENSMUSG00000029836	ProperStrand	19	chr4	131908356	131908412	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.3472
chr6	121336170	121336192	protein_coding	Iqsec3	intron	ENSMUSG00000040797	NonProperStrand	139	chr6	124665333	124665424	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	1	-5.2835
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	4	-8.1916
chr8	114390108	114390177	protein_coding	Tmem170	utr3	ENSMUSG00000031953	ProperStrand	16	chr1	162965531	162965550	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	4	-18.1104
chrX	156565645	156566448	protein_coding	Pdha1	exon	ENSMUSG00000031299	ProperStrand	27	chr9	64024974	64024998	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	1	-10.7544
chr5	121655052	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	chr2	130103751	130103825	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	5	-2.9389
chr3	89070915	89070977	protein_coding	Dpm3	utr3	ENSMUSG00000042737	ProperStrand	3	chr16	23110966	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr4	55431651	55431668	lincRNA	Gm12505	exon	ENSMUSG00000087070	ProperStrand	447	chr4	129274122	129276223	protein_coding	Eif3i	exon	ENSMUSG00000028798	ProperStrand	9	1	-13.1779
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr6	113505192	113506280	protein_coding	Fancd2	exon	ENSMUSG00000034023	ProperStrand	65	3	-11.3831
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	89383967	89663855	protein_coding	Slc4a4	exon	ENSMUSG00000060961	NonProperStrand	195	2	-4.1278
chr2	26494708	26494825	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	chr13	49779668	49779805	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	14	-4.1955
chr13	112545720	112545820	protein_coding	Map3k1	exon	ENSMUSG00000021754	ProperStrand	113	chr4	116827120	116827159	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-5.7913
chr15	101925437	101926909	protein_coding	Eif4b	exon	ENSMUSG00000058655	ProperStrand	484	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	10	-9.8917
chr11	115279780	115281209	protein_coding	Atp5h	utr5	ENSMUSG00000034566	ProperStrand	11	chr10	23505152	23505178	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-10.3969
chr17	22733954	22734044	LINE	L1_Mur2	L1	chr17L1_Mur222732897	ProperStrand	1	chr3	158840899	158840979	LINE	L1Md_T	L1	chr3L1Md_T158836752	ProperStrand	1	1	-inf
chr7	54866445	54866462	LINE	L1_Mus4	L1	chr7L1_Mus454866442	ProperStrand	3	chr11	97642957	97643008	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-8.5513
chr13	19465056	19465077	protein_coding	Stard3nl	exon	ENSMUSG00000003062	ProperStrand	8	chr19	8800384	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-7.5245
chr16	4714575	4714619	protein_coding	Nmral1	exon	ENSMUSG00000063445	ProperStrand	10	chr2	26493366	26493392	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-7.2843
chr17	28465953	28465970	protein_coding	Rpl10a	exon	ENSMUSG00000037805	ProperStrand	121	chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	1	-7.1948
chr15	88703508	88703527	LTR	RMER6B	ERVK	chr15RMER6B88703200	ProperStrand	3	chr8	73419682	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-inf
chr11	69716738	69721627	protein_coding	Neurl4	exon	ENSMUSG00000047284	ProperStrand	28	chr16	23110844	23110996	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-7.0980
chr13	55215130	55216855	protein_coding	Zfp346	exon	ENSMUSG00000021481	ProperStrand	22	chr9	15119631	15119767	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.4840
chr6	89267520	89267555	protein_coding	Plxna1	utr3	ENSMUSG00000030084	ProperStrand	233	chr10	107800722	107800812	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	1	-5.3932
chr2	103623351	103636921	protein_coding	Caprin1	exon	ENSMUSG00000027184	ProperStrand	145	chr5	121655134	121655156	protein_coding	Rpl6	intron	ENSMUSG00000029614	ProperStrand	332	1	-8.1204
chr11	6428034	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr4	86232389	86232487	snoRNA	ENSMUSG00000088958_Scarna8	.	ENSMUSG00000088958	ProperStrand	366	6	-5.5548
chr10	75359822	75360194	protein_coding	Smarcb1	exon	ENSMUSG00000000902	ProperStrand	109	chr4	135981397	135981421	protein_coding	Htr1d	intron	ENSMUSG00000070687	NonProperStrand	21	1	-14.2423
chr2	146068741	146068824	protein_coding	Ralgapa2	utr3	ENSMUSG00000037110	ProperStrand	35	chr15	5068442	5068479	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-7.1377
chr16	20293467	20297673	protein_coding	Parl	exon	ENSMUSG00000033918	ProperStrand	19	chr7	117189992	117190057	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-5.5364
chr11	97489600	97489617	protein_coding	E130012A19Rik	exon	ENSMUSG00000043439	NonProperStrand	110	chr16	90386835	90386853	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	1	-10.9911
chr1	88253717	88253754	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chr17	28467578	28467614	protein_coding	Rpl10a	exon	ENSMUSG00000037805	ProperStrand	121	5	-18.9550
chr15	60661082	60661098	lincRNA	9930014A18Rik	exon	ENSMUSG00000044513	ProperStrand	54	chr4	135846171	135846187	protein_coding	Zfp46	exon	ENSMUSG00000051351	NonProperStrand	85	1	-12.8268
chr11	120456421	120456442	protein_coding	Alyref	exon	ENSMUSG00000025134	ProperStrand	53	chr7	116663640	116663758	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.7266
chr3	93250059	93250076	protein_coding	Tchh	exon	ENSMUSG00000052415	ProperStrand	26	chr9	120038467	120038551	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.6046
chr3	131005673	131005690	lincRNA	4930534D22Rik	exon	ENSMUSG00000091852	ProperStrand	1	chr8	98269972	98270085	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	NonProperStrand	11	1	-inf
chr11	5180669	5180685	protein_coding	Znrf3	utr3	ENSMUSG00000041961	NonProperStrand	210	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-6.4365
chr2	73613318	73613398	protein_coding	Chn1	utr5	ENSMUSG00000056486	ProperStrand	9	chr2	26494727	26494817	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-6.8145
chr9	81949793	81949813	protein_coding	Mei4	intron	ENSMUSG00000043289	NonProperStrand	42	chr2	32818803	32818893	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	3	-14.1985
chr16	93873623	93875013	protein_coding	Morc3	exon	ENSMUSG00000039456	ProperStrand	24	chr19	39917317	39917333	protein_coding	Cyp2c69	utr3	ENSMUSG00000092008	NonProperStrand	83	1	-14.5138
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr1	42755254	42755270	protein_coding	Pou3f3	exon	ENSMUSG00000045515	NonProperStrand	117	1	-9.0893
chr2	24506055	24538569	protein_coding	Cacna1b	exon	ENSMUSG00000004113	ProperStrand	83	chr4	131908686	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-1.6676
chr4	140121137	140121154	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	chr19	8963025	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	4	-4.8014
chr4	155323696	155323807	protein_coding	Ube2j2	intron	ENSMUSG00000023286	ProperStrand	35	chr14	61830069	61830103	protein_coding	Sacs	exon	ENSMUSG00000048279	ProperStrand	65	5	-20.5869
chr6	149280020	149283158	protein_coding	2810474O19Rik	exon	ENSMUSG00000032712	ProperStrand	70	chr5	108336389	108336490	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-4.5844
chr17	35151300	35151650	protein_coding	Vars	exon	ENSMUSG00000007029	ProperStrand	121	chr11	97642952	97643027	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.3681
chr5	119198590	119198628	protein_coding	Med13l	exon	ENSMUSG00000018076	ProperStrand	226	chr11	97315304	97315320	protein_coding	Arhgap23	exon	ENSMUSG00000049807	NonProperStrand	7	1	-15.0870
chr6	60959631	60959721	LINE	L1Md_A	L1	chr6L1Md_A60959615	ProperStrand	1	chr6	60959532	60959612	LINE	L1_Rod	L1	chr6L1_Rod60959521	ProperStrand	1	1	-inf
chr10	82184481	82184552	protein_coding	Hcfc2	intron	ENSMUSG00000020246	ProperStrand	2	chr11	35148590	35148607	protein_coding	Slit3	intron	ENSMUSG00000056427	NonProperStrand	45	2	-inf
chr1	77369843	77369879	protein_coding	Epha4	utr3	ENSMUSG00000026235	ProperStrand	57	chr5	74489564	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	4	-12.6911
chr11	59317141	59317158	protein_coding	Zkscan17	exon	ENSMUSG00000020472	NonProperStrand	2	chr17	35296038	35296069	protein_coding	Prrc2a	exon	ENSMUSG00000024393	ProperStrand	315	1	-17.4896
chr2	79132657	79132674	protein_coding-noncoding	Itga4	utr5	ENSMUSG00000027009	NonProperStrand	118	chr17	27979254	27982193	protein_coding	Snrpc	exon	ENSMUSG00000024217	ProperStrand	9	1	-15.8277
chr2	90235295	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	31722744	31722760	protein_coding	Pknox1	intron	ENSMUSG00000006705	ProperStrand	110	1	-3.3307
chr8	23486696	23486796	protein_coding	Slc25a15	utr3	ENSMUSG00000031482	ProperStrand	13	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-6.5816
chr2	104853028	104853060	protein_coding	Eif3m	exon	ENSMUSG00000027170	ProperStrand	14	chr5	118376503	118376519	protein_coding	Nos1	exon	ENSMUSG00000029361	NonProperStrand	237	1	-13.5247
chr4	122970392	122970453	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	chr5	147646757	147646835	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	1	-2.3540
chr19	23292910	23292958	protein_coding	Smc5	exon	ENSMUSG00000024943	ProperStrand	146	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-5.1791
chr17	12962267	12962367	protein_coding	Igf2r	exon	ENSMUSG00000023830	ProperStrand	151	chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	1	-7.2243
chr11	100567747	100567837	protein_coding	Kat2a	intron	ENSMUSG00000020918	ProperStrand	68	chr2	84610283	84610363	protein_coding	Serping1	exon	ENSMUSG00000023224	ProperStrand	8	1	-17.0681
chr8	125025102	125025258	protein_coding	Fam38a	utr5	ENSMUSG00000014444	ProperStrand	132	chr11	69483190	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-3.7523
chrX	59716002	59716082	LINE	L1Md_T	L1	chrXL1Md_T59715386	NonProperStrand	1	chr7	110699208	110699298	protein_coding	Olfr613	utr5	ENSMUSG00000078624	ProperStrand	16	1	-inf
chr3	104453220	104453253	protein_coding	Slc16a1	utr5	ENSMUSG00000032902	ProperStrand	48	chr7	52382234	52382315	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-8.7310
chr17	29630685	29630775	protein_coding	Pim1	exon	ENSMUSG00000024014	ProperStrand	13	chr17	24857740	24857820	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-5.1456
chr17	46702232	46702287	protein_coding	Ptk7	utr3	ENSMUSG00000023972	ProperStrand	101	chr5	99443584	99443601	protein_coding	Prkg2	intron	ENSMUSG00000029334	NonProperStrand	57	1	-12.3707
chr3	135268102	135268121	protein_coding	Nfkb1	exon	ENSMUSG00000028163	ProperStrand	55	chr11	62418013	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	3	-13.2754
chr11	80886303	80886325	antisense	Gm11417	.	ENSMUSG00000085130	ProperStrand	2	chr17	24857720	24857775	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-9.4368
chr14	80262508	80262525	lincRNA	Gm6999	intron	ENSMUSG00000075495	ProperStrand	265	chr11	120209072	120209111	protein_coding	Actg1	exon	ENSMUSG00000062825	ProperStrand	178	1	-8.1602
chr15	96830032	96836258	protein_coding	Slc38a4	exon	ENSMUSG00000022464	ProperStrand	139	chr4	153395246	153395302	protein_coding	Lrrc47	utr3	ENSMUSG00000029028	ProperStrand	30	2	-19.3504
chr10	127926813	127926859	protein_coding	Smarcc2	utr3	ENSMUSG00000025369	ProperStrand	16	chr5	145532286	145532313	protein_coding	Trrap	intron	ENSMUSG00000045482	ProperStrand	399	1	-12.2032
chr4	73944518	74041530	protein_coding	Kdm4c	intron	ENSMUSG00000028397	ProperStrand	36	chr16	23111689	23111786	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	6	-15.6939
chr3	41392770	41392805	protein_coding	Phf17	intron	ENSMUSG00000025764	ProperStrand	101	chr17	36000485	36000501	protein_coding	Nrm	exon	ENSMUSG00000059791	ProperStrand	253	1	-9.3834
chrX	123932222	123932242	LTR	MT2A	ERVL	chrXMT2A123931897	ProperStrand	1	chr1	162965531	162965588	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-inf
chr8	11628210	11628267	protein_coding	Ankrd10	intron	ENSMUSG00000031508	ProperStrand	32	chr2	130102057	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-6.5974
chr2	90235304	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	167036807	167036824	protein_coding	Ptgis	intron	ENSMUSG00000017969	ProperStrand	5	1	-9.5409
chr19	46143567	46143587	protein_coding	Pprc1	exon	ENSMUSG00000055491	ProperStrand	143	chr15	34370545	34370625	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-2.0361
chr4	85016349	85016365	protein_coding	Sh3gl2	intron	ENSMUSG00000028488	NonProperStrand	313	chr11	57961372	57961396	protein_coding	Gemin5	exon	ENSMUSG00000037275	ProperStrand	33	1	-11.2096
chr10	59763610	59764523	protein_coding	Psap	exon	ENSMUSG00000004207	ProperStrand	124	chr2	144087323	144087406	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	4	-15.8367
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr17	24665424	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-0.9584
chr16	11144151	11144231	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr11	6428081	6428172	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	NonProperStrand	91	1	-9.6240
chr7	149170855	149171339	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	chr10	23506295	23506348	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-4.9307
chr9	106383093	106383118	protein_coding	Rrp9	exon	ENSMUSG00000041506	ProperStrand	32	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.8186
chr1	83095452	83095542	LTR	MTE2b	MaLR	chr1MTE2b83095470	ProperStrand	1	chr1	83095346	83095426	Simple_repeat	(GA)n	Simple_repeat	chr1(GA)n83095351	ProperStrand	1	1	-inf
chr6	127690686	127690707	protein_coding	Prmt8	intron	ENSMUSG00000030350	NonProperStrand	3	chr17	13184993	13185010	protein_coding	Wtap	utr5	ENSMUSG00000060475	ProperStrand	119	1	-18.6125
chr8	127407452	127407468	protein_coding	Gnpat	exon	ENSMUSG00000031985	NonProperStrand	13	chr11	106362638	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-10.5079
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr4	117930252	117941850	protein_coding	Ptprf	exon	ENSMUSG00000033295	ProperStrand	337	1	-5.1996
chr4	155366536	155366552	protein_coding	B3galt6	exon	ENSMUSG00000050796	ProperStrand	40	chr11	62416599	62416657	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	3	-13.7792
chr17	27760193	27760294	protein_coding	Nudt3	utr5	ENSMUSG00000024213	ProperStrand	26	chr9	63868722	63868738	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	1	-10.2742
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr18	63109676	63109692	protein_coding	Apcdd1	exon	ENSMUSG00000071847	NonProperStrand	254	1	-5.7361
chr11	78155398	78155478	protein_coding	Pigs	exon	ENSMUSG00000041958	ProperStrand	31	chr5	139748013	139748029	protein_coding	Adap1	utr3	ENSMUSG00000056413	ProperStrand	16	2	-19.0178
chr1	177536286	177538024	protein_coding	Fh1	exon	ENSMUSG00000026526	ProperStrand	37	chr7	117189865	117189919	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-7.1701
chr17	70718673	70718689	protein_coding	Dlgap1	intron	ENSMUSG00000003279	NonProperStrand	36	chr19	8963027	8963127	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.1678
chr1	102023861	102023877	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	chr15	79908929	79908956	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-1.9504
chr18	16933117	16966848	protein_coding	Cdh2	exon	ENSMUSG00000024304	ProperStrand	71	chr5	111121147	111121200	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-6.1022
chr18	42805538	42805554	protein_coding	Ppp2r2b	exon	ENSMUSG00000024500	NonProperStrand	95	chr8	87542786	87542808	protein_coding	Asna1	exon	ENSMUSG00000052456	ProperStrand	25	1	-14.1617
chr2	35419880	35419897	protein_coding	Dab2ip	intron	ENSMUSG00000026883	NonProperStrand	58	chr17	39985296	39985356	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-5.9989
chr13	56834430	56837175	protein_coding	Smad5	exon	ENSMUSG00000021540	ProperStrand	47	chr16	23111372	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.6112
chr4	135606273	135607126	protein_coding	Rpl11	exon	ENSMUSG00000059291	ProperStrand	152	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-3.4520
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr2	11510631	11510669	protein_coding	Rbm17	exon	ENSMUSG00000037197	ProperStrand	50	1	-8.1600
chr2	30033244	30033334	protein_coding	D2Wsu81e	utr5	ENSMUSG00000039660	ProperStrand	7	chr3	123210853	123210933	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-6.1463
chr14	21839937	21839985	protein_coding	Vcl	utr5	ENSMUSG00000021823	ProperStrand	48	chr6	115757990	115758088	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-5.9099
chr10	6037026	6037104	protein_coding	Akap12	intron	ENSMUSG00000038587	ProperStrand	1008	chr4	62318891	62318908	protein_coding	Rgs3	utr3	ENSMUSG00000059810	ProperStrand	40	3	-19.1350
chr5	108336222	108336289	protein_coding	Rpl5	exon	ENSMUSG00000058558	ProperStrand	235	chr6	71832550	71832576	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-3.0374
chr2	51992282	51992298	protein_coding	Neb	utr3	ENSMUSG00000026950	NonProperStrand	5	chr5	118713115	118713177	protein_coding	2410131K14Rik	utr3	ENSMUSG00000032840	ProperStrand	6	2	-19.1450
chr19	6352819	6353132	protein_coding	Map4k2	exon	ENSMUSG00000024948	ProperStrand	11	chr4	131865896	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-11.8308
chr3	28705512	28705717	protein_coding	Rpl22l1	exon	ENSMUSG00000039221	ProperStrand	4	chr4	131865872	131865962	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.0048
chr11	97890732	97890760	protein_coding	Rpl19	exon	ENSMUSG00000017404	ProperStrand	120	chr1	162965551	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.0777
chr10	12642384	12642416	lincRNA	B230208H11Rik	exon	ENSMUSG00000085233	ProperStrand	21	chr9	110290683	110290730	protein_coding	Ptpn23	exon	ENSMUSG00000036057	ProperStrand	34	1	-16.5781
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr1	164236463	164236481	protein_coding	Dnm3	intron	ENSMUSG00000040265	ProperStrand	11	1	-12.1770
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	1	-6.1238
chr8	41574441	41574460	protein_coding	Zdhhc2	intron	ENSMUSG00000039470	ProperStrand	5	chr4	131908301	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-6.0411
chr10	127995985	127996148	protein_coding	Pa2g4	exon	ENSMUSG00000025364	ProperStrand	72	chr3	123210854	123210878	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-3.2627
chr12	32612124	32612214	protein_coding	Hbp1	utr3	ENSMUSG00000002996	ProperStrand	26	chr7	116663660	116663740	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.0328
chr3	102859380	102859407	protein_coding	Csde1	exon	ENSMUSG00000068823	ProperStrand	122	chr7	116663732	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.3897
chr5	116174721	116174738	protein_coding	Ccdc64	exon	ENSMUSG00000041609	ProperStrand	51	chr2	89368462	89368479	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	1	-10.6856
chr18	34880002	34880019	protein_coding	Gfra3	utr5	ENSMUSG00000024366	ProperStrand	41	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-7.3493
chr8	74908172	74908252	protein_coding	Eps15l1	intron	ENSMUSG00000006276	ProperStrand	42	chr19	8963027	8963117	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.8907
chr4	120818865	120818965	protein_coding	Rlf	utr3	ENSMUSG00000049878	ProperStrand	58	chr17	13112511	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	15	-21.1620
chr3	129336242	129336322	protein_coding	Elovl6	exon	ENSMUSG00000041220	ProperStrand	59	chr1	187066827	187066917	snoRNA	ENSMUSG00000077571_Snora36b	.	ENSMUSG00000077571	ProperStrand	244	2	-16.5721
chr17	26261645	26262240	protein_coding	Mrpl28	exon	ENSMUSG00000024181	ProperStrand	10	chr19	5382228	5382328	protein_coding	Sart1	exon	ENSMUSG00000039148	ProperStrand	32	1	-18.1595
chr4	125806142	125806204	protein_coding	Stk40	exon	ENSMUSG00000042608	ProperStrand	32	chr6	94776852	94776874	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	1	-10.3684
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr17	66798457	66798473	protein_coding	1110012J17Rik	exon	ENSMUSG00000052105	NonProperStrand	38	1	-6.8084
chr5	116013298	116013329	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	chr15	79908965	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	2	-4.4568
chr14	32479927	32479943	protein_coding	Btd	exon	ENSMUSG00000021900	NonProperStrand	74	chr10	90432661	90432677	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	1	-10.1972
chrX	84483699	84483733	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr1	181027187	181027205	protein_coding	Smyd3	intron	ENSMUSG00000055067	ProperStrand	231	1	-5.5842
chr17	87057107	87057197	protein_coding	Prkce	utr3	ENSMUSG00000045038	ProperStrand	19	chr9	120039587	120039667	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-5.5217
chr11	102375424	102375515	protein_coding	Gpatch8	intron	ENSMUSG00000034621	ProperStrand	49	chr10	23505200	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.5211
chr8	17246581	17246602	protein_coding	Csmd1	intron	ENSMUSG00000060924	ProperStrand	19	chr12	106269399	106269489	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-6.3910
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr8	122728399	122728415	protein_coding	Gm20388	intron	ENSMUSG00000092329	NonProperStrand	203	1	-5.3374
chr2	90235305	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	186620447	186620464	protein_coding	Mosc1	intron	ENSMUSG00000026621	NonProperStrand	2	1	-11.8388
chr1	84724768	84741291	protein_coding	Trip12	exon	ENSMUSG00000026219	ProperStrand	248	chr11	69483136	69483279	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-1.1107
chr6	29420126	29420142	protein_coding	Atp6v1f	exon	ENSMUSG00000004285	NonProperStrand	6	chr6	33470447	33470463	protein_coding	Exoc4	intron	ENSMUSG00000029763	NonProperStrand	10	1	-19.0093
chr6	72180855	72180872	protein_coding	Atoh8	intron	ENSMUSG00000037621	NonProperStrand	61	chr2	30908636	30909545	protein_coding	Fnbp1	exon	ENSMUSG00000075415	ProperStrand	53	1	-13.5303
chr11	42440243	42440259	protein_coding	Gabrb2	exon	ENSMUSG00000007653	ProperStrand	248	chr15	79913291	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-1.2481
chr18	24363855	24423016	protein_coding	Galnt1	exon	ENSMUSG00000000420	ProperStrand	158	chr4	131908689	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-1.1460
chr15	78893027	78893044	protein_coding	Ankrd54	exon	ENSMUSG00000033055	NonProperStrand	4	chr3	123210851	123210908	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-7.3786
chr7	28303029	28303129	protein_coding	Prx	utr3	ENSMUSG00000053198	ProperStrand	21	chr18	35714196	35714262	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-5.4554
chr6	5106483	5106513	protein_coding	Ppp1r9a	intron	ENSMUSG00000032827	ProperStrand	50	chr18	35716787	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-4.3786
chr9	40612876	40612921	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	chr14	76372320	76372410	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	1	-5.2713
chr17	23955819	23955836	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	chr16	23111697	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-1.4108
chr11	69478365	69478415	protein_coding	Cd68	exon	ENSMUSG00000018774	ProperStrand	12	chr19	44188449	44188539	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	5	-20.1966
chr1	75176672	75176727	protein_coding	Abcb6	utr5	ENSMUSG00000026198	ProperStrand	9	chr12	112779148	112779238	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-8.5940
chr3	156224612	156224628	lincRNA	4930570G19Rik	exon	ENSMUSG00000085084	ProperStrand	326	chr7	133938887	133938922	protein_coding	Aldoa	utr3	ENSMUSG00000030695	ProperStrand	721	1	-5.0068
chr11	102916516	102916575	protein_coding	Nmt1	exon	ENSMUSG00000020936	ProperStrand	43	chr18	35102297	35102337	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-7.2529
chr5	136187744	136187844	protein_coding	Por	intron	ENSMUSG00000005514	ProperStrand	42	chr1	162967540	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.1412
chr14	94287905	94287924	protein_coding	Pcdh9	exon	ENSMUSG00000055421	NonProperStrand	9	chr17	24857715	24857776	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-5.8950
chr2	147009105	147009122	protein_coding	Nkx2-2	utr3	ENSMUSG00000027434	NonProperStrand	84	chr16	23110455	23110517	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.9074
chr4	55431652	55431668	lincRNA	Gm12505	exon	ENSMUSG00000087070	ProperStrand	447	chr12	106269284	106269384	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-0.8744
chrX	39167804	39175561	protein_coding	Thoc2	exon	ENSMUSG00000037475	ProperStrand	30	chr1	162965986	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	3	-11.7085
chr16	17902156	17902208	protein_coding	Dgcr14	exon	ENSMUSG00000003527	ProperStrand	5	chr10	39452167	39452184	protein_coding	Rev3l	utr5	ENSMUSG00000019841	ProperStrand	39	1	-18.1128
chr3	142351261	142351279	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr16	97976723	97976854	protein_coding	Ripk4	exon	ENSMUSG00000005251	ProperStrand	28	1	-9.3286
chr6	31469952	31473099	protein_coding	Podxl	utr3	ENSMUSG00000025608	ProperStrand	37	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	10	-15.5285
chr3	94604554	94604644	LTR	MER57D	ERV1	chr3MER57D94604524	ProperStrand	1	chr3	94604402	94604482	LTR	MLT1D	MaLR	chr3MLT1D94604302	NonProperStrand	1	1	-inf
chr9	20151699	20151716	protein_coding	Zfp560	utr3	ENSMUSG00000045519	ProperStrand	1	chr15	98350146	98350200	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-inf
chr9	64025230	64025274	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	chr17	28962874	28962905	protein_coding	Brpf3	intron	ENSMUSG00000063952	ProperStrand	32	1	-9.9458
chr9	98307240	98307257	protein_coding	Nmnat3	intron	ENSMUSG00000032456	NonProperStrand	19	chr1	162965980	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-5.8254
chr4	118804840	118805052	protein_coding	Slc2a1	exon	ENSMUSG00000028645	ProperStrand	361	chr2	25753943	25754222	protein_coding	Kcnt1	exon	ENSMUSG00000058740	ProperStrand	8	1	-13.8558
chr1	169297561	169297657	protein_coding	Aldh9a1	utr3	ENSMUSG00000026687	ProperStrand	58	chr1	63225652	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-6.7353
chr9	121383485	121383503	protein_coding	Trak1	utr3	ENSMUSG00000032536	NonProperStrand	19	chr5	111121066	111121175	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	4	-inf
chr8	23290910	23291011	protein_coding	Ckap2	intron	ENSMUSG00000037725	ProperStrand	69	chr16	23111452	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.0727
chr6	124885325	124885378	protein_coding	Mlf2	exon	ENSMUSG00000030120	ProperStrand	80	chr10	107800720	107800810	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	1	-7.4966
chr5	135857806	135857878	protein_coding	Pom121	exon	ENSMUSG00000053293	ProperStrand	127	chr19	8963026	8963126	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.1421
chr3	65332039	65332055	protein_coding	4931440P22Rik	utr3	ENSMUSG00000074580	ProperStrand	2	chr4	131908363	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-inf
chr2	35572723	35574310	protein_coding	Dab2ip	exon	ENSMUSG00000026883	ProperStrand	93	chr19	8798754	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-3.9674
chr15	77597977	77597993	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr7	52382014	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-2.4742
chr9	30876410	30876463	protein_coding	Zbtb44	utr3	ENSMUSG00000047412	ProperStrand	68	chr19	7054884	7054901	protein_coding	Fkbp2	utr5	ENSMUSG00000056629	ProperStrand	18	1	-15.4775
chr5	115792968	115792984	protein_coding	Triap1	utr3	ENSMUSG00000029535	ProperStrand	3	chr8	109440140	109441549	protein_coding	Cirh1a	exon	ENSMUSG00000041438	ProperStrand	40	1	-20.6314
chr2	58148467	58148483	protein_coding	Acvr1c	exon	ENSMUSG00000026834	ProperStrand	11	chr1	162965979	162965996	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-6.9371
chr5	144970903	144970993	protein_coding	Tecpr1	exon	ENSMUSG00000066621	ProperStrand	9	chr16	23110884	23110992	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-8.1007
chr2	145076804	145209250	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	chr2	69704609	69704656	protein_coding	Ssb	exon	ENSMUSG00000068882	ProperStrand	37	1	-8.6931
chr6	128384184	128384204	protein_coding	Fkbp4	intron	ENSMUSG00000030357	NonProperStrand	42	chr12	21351551	21353200	protein_coding	Adam17	exon	ENSMUSG00000052593	ProperStrand	20	1	-16.2332
chr5	108334192	108334218	protein_coding	Rpl5	intron	ENSMUSG00000058558	ProperStrand	235	chr5	108334224	108334332	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-2.3298
chr15	75900785	75900875	protein_coding	Puf60	exon	ENSMUSG00000002524	ProperStrand	18	chr11	97642992	97643072	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.6997
chr6	85895881	85895897	protein_coding	Dusp11	utr3	ENSMUSG00000030002	ProperStrand	37	chr11	62416575	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-9.9499
chr17	46663594	46663610	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr4	130305550	130305619	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	1	-5.8615
chr19	29218225	29218254	protein_coding	Rcl1	utr3	ENSMUSG00000024785	ProperStrand	14	chr17	24857725	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	3	-12.0368
chr10	42298355	42298372	protein_coding	Nr2e1	intron	ENSMUSG00000019803	ProperStrand	32	chr4	131865866	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.8186
chrX	53839617	53839634	protein_coding	Mmgt1	utr3	ENSMUSG00000061273	ProperStrand	2	chr17	24857716	24857775	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-9.4368
chr16	17279787	17279851	protein_coding	Tmem191c	intron	ENSMUSG00000055692	ProperStrand	16	chr6	124665333	124665421	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	1	-9.6031
chr17	68126286	68126376	protein_coding	Lama1	exon	ENSMUSG00000032796	ProperStrand	168	chr3	152124926	152124962	protein_coding	Zzz3	utr3	ENSMUSG00000039068	ProperStrand	26	2	-19.2407
chr4	139002938	139004769	protein_coding	Ubr4	exon	ENSMUSG00000066036	ProperStrand	304	chr18	73693109	73693134	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-2.5108
chr9	36566447	36566882	protein_coding	Stt3a	exon	ENSMUSG00000032116	ProperStrand	31	chr19	8798507	8798553	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-6.5133
chr2	158279948	158280003	protein_coding	Ralgapb	exon	ENSMUSG00000027652	ProperStrand	22	chr9	120039628	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-8.6421
chr7	4760018	4762035	protein_coding	Ube2s	exon	ENSMUSG00000060860	ProperStrand	62	chr11	68886963	68887053	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-4.0820
chr2	90235292	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	46861595	46861611	protein_coding	Pex6	exon	ENSMUSG00000002763	ProperStrand	292	3	-4.7798
chr6	29405783	29405833	protein_coding	Flnc	exon	ENSMUSG00000068699	ProperStrand	15	chr18	33954894	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-10.1387
chr10	5987873	5987943	protein_coding	Akap12	utr3	ENSMUSG00000038587	ProperStrand	1008	chr9	64024957	64024998	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	5	-15.1634
chr9	64148983	64149048	protein_coding	Tipin	exon	ENSMUSG00000032397	ProperStrand	32	chr16	23110891	23111010	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-8.2270
chr2	90235294	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	66998932	66998949	protein_coding	Egr2	intron	ENSMUSG00000037868	NonProperStrand	7	1	-8.8025
chr18	36910796	36910866	protein_coding	Ik	exon	ENSMUSG00000024474	ProperStrand	60	chr13	46862888	46862937	snoRNA	ENSMUSG00000064558_SNORA55	.	ENSMUSG00000064558	ProperStrand	187	1	-11.0331
chr4	108996738	108996763	protein_coding	Eps15	exon	ENSMUSG00000028552	ProperStrand	15	chr16	23111446	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.5828
chr6	101485357	101485378	LTR	MTEa	MaLR	chr6MTEa101485361	ProperStrand	45	chr3	34550105	34550126	protein_coding	Sox2	exon	ENSMUSG00000074637	ProperStrand	299	1	-10.6740
chr17	34089208	34089366	protein_coding	Rps18	exon	ENSMUSG00000008668	ProperStrand	111	chr7	116663653	116663743	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.5263
chr10	127924648	127925025	protein_coding	Smarcc2	exon	ENSMUSG00000025369	ProperStrand	16	chr17	39985196	39985286	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-8.5867
chrX	70237450	70237471	miRNA	Mir2137	.	ENSMUSG00000089357	ProperStrand	50	chr11	51551334	51551424	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	2	-12.8742
chr6	122685614	122689983	protein_coding	Slc2a3	exon	ENSMUSG00000003153	ProperStrand	682	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	5	-1.9785
chr17	23955821	23955838	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	chr18	63109676	63109692	protein_coding	Apcdd1	exon	ENSMUSG00000071847	NonProperStrand	254	1	-8.5855
chr11	113523870	113523887	protein_coding	Cog1	utr3	ENSMUSG00000018661	ProperStrand	51	chr14	71167341	71167358	protein_coding	Dok2	intron	ENSMUSG00000022102	ProperStrand	4	1	-22.1640
chr2	4974190	4974207	protein_coding	Optn	exon	ENSMUSG00000026672	ProperStrand	451	chr19	8798484	8798513	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-1.6179
chr7	13516140	13516194	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr11	101488801	101488880	snRNA	ENSMUSG00000065767_U2	.	ENSMUSG00000065767	ProperStrand	10	3	-20.5714
chr12	37542834	37542880	DNA	FordPrefect	Tip100	chr12FordPrefect37542835	ProperStrand	4	chr18	35716832	35716884	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-7.5042
chr14	20583113	20609602	protein_coding	Nid2	exon	ENSMUSG00000021806	ProperStrand	372	chr11	62416609	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	5	-9.4097
chr4	155253025	155253134	protein_coding	Cpsf3l	intron	ENSMUSG00000029034	ProperStrand	15	chr10	121187505	121187543	protein_coding	BC048403	exon	ENSMUSG00000053684	ProperStrand	8	1	-19.9036
chr13	13556067	13556084	protein_coding	Nid1	exon	ENSMUSG00000005397	NonProperStrand	6	chr4	141140720	141140767	protein_coding	Fblim1	exon	ENSMUSG00000006219	ProperStrand	26	1	-18.7113
chr16	96252276	96252292	protein_coding	Brwd1	exon	ENSMUSG00000022914	NonProperStrand	13	chr4	131865855	131865923	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.5141
chr9	120038468	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	chr15	79908930	79909020	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	23	-2.3050
chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	chr11	106362638	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-3.4290
chr9	82596194	82596223	LTR	RLTR10-int	ERVK	chr9RLTR10-int82596032	NonProperStrand	1	chr11	55296195	55296291	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-inf
chr6	34817299	34817318	protein_coding	Tmem140	intron	ENSMUSG00000057137	ProperStrand	3	chr2	22444493	22444516	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-14.1417
chr8	113447127	113447171	protein_coding	St3gal2	intron	ENSMUSG00000031749	ProperStrand	206	chr11	43518524	43518624	protein_coding	Pwwp2a	exon	ENSMUSG00000044950	ProperStrand	22	1	-12.8723
mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	4	-6.5321
chrX	72214248	72214264	protein_coding-noncoding	Gab3	utr3	ENSMUSG00000032750	ProperStrand	420	chr6	118355163	118355218	protein_coding	Bms1	exon	ENSMUSG00000030138	ProperStrand	107	1	-8.2587
chr4	43505767	43505847	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr3	96132424	96132514	snRNA	ENSMUSG00000075978_U1	.	ENSMUSG00000075978	ProperStrand	132	1	-1.7461
chr17	92586494	92586513	LTR	MTA_Mm-int	MaLR	chr17MTA_Mm-int92585983	ProperStrand	5	chr7	117189932	117189992	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-8.3295
chr16	4886395	4886411	protein_coding	Mgrn1	exon	ENSMUSG00000022517	NonProperStrand	157	chr16	91729701	91729722	protein_coding	Itsn1	utr5	ENSMUSG00000022957	ProperStrand	172	1	-9.2718
chr11	88156899	88156960	protein_coding	Msi2	utr3	ENSMUSG00000069769	ProperStrand	159	chr5	121655127	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.0386
chr15	79908939	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	chr13	96100551	96100641	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	1	-0.9724
chr3	96218665	96218755	misc_RNA	Telomerase-vert	.	ENSMUSG00000064796	ProperStrand	443	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-7.6901
chr2	102873313	102873336	protein_coding	Pdhx	intron	ENSMUSG00000010914	ProperStrand	13	chr10	23505150	23505235	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-6.5499
chr3	96218557	96218637	misc_RNA	Telomerase-vert	.	ENSMUSG00000064796	ProperStrand	443	chr8	98269964	98270054	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-1.9071
chr4	86500709	86500809	protein_coding	Rps6	exon	ENSMUSG00000028495	ProperStrand	263	chr1	162965550	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-0.9485
chr2	169941738	169944562	protein_coding	Zfp217	exon	ENSMUSG00000052056	ProperStrand	79	chr18	35714200	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-2.9460
chr13	63429141	63429158	protein_coding	Fancc	intron	ENSMUSG00000021461	ProperStrand	11	chr11	6428102	6428156	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-6.4917
chr12	99756958	99756975	protein_coding	Kcnk10	exon	ENSMUSG00000033854	NonProperStrand	37	chr7	116664873	116664925	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.4116
chr9	64852263	64852281	protein_coding	Ptplad1	intron	ENSMUSG00000033629	NonProperStrand	5	chr7	135842910	135845761	protein_coding	Mcmbp	exon	ENSMUSG00000048170	ProperStrand	87	1	-17.5046
chr4	107068393	107083695	protein_coding	Tmem48	exon	ENSMUSG00000028614	ProperStrand	42	chr3	92627870	92627886	protein_coding	Kprp	exon	ENSMUSG00000059832	NonProperStrand	5	1	-18.4417
chr6	136771342	136771432	protein_coding	Wbp11	exon	ENSMUSG00000030216	ProperStrand	87	chr4	131865380	131865456	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	2	-5.6677
chr7	143781768	143781784	LINE	Lx9	L1	chr7Lx9143781715	ProperStrand	23	chr5	121655033	121655096	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.5970
chr4	128867196	128867212	protein_coding	Yars	exon	ENSMUSG00000028811	ProperStrand	131	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.7252
chr8	63679839	63679929	LINE	L1MC1	L1	chr8L1MC163679759	NonProperStrand	1	chr8	63679633	63679713	SINE	PB1D10	Alu	chr8PB1D1063679628	NonProperStrand	1	1	-inf
chr17	4082848	4082872	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr7	120657374	120657390	protein_coding	Far1	utr5	ENSMUSG00000030759	ProperStrand	72	1	-9.5991
chr2	90235290	90235340	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	17443077	17443094	protein_coding	Cited2	utr5	ENSMUSG00000039910	ProperStrand	64	4	-13.8804
chr3	140094601	140094619	LINE	Lx6	L1	chr3Lx6140094492	ProperStrand	1	chr10	23505559	23505621	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-inf
chr9	44586674	44590225	protein_coding	Ift46	utr5	ENSMUSG00000002031	ProperStrand	28	chr4	131866160	131866240	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	5	-19.0683
chr1	160083795	160083875	LTR	MT2A	ERVL	chr1MT2A160083770	ProperStrand	1	chr11	63213183	63213273	SINE	B3A	B2	chr11B3A63213075	NonProperStrand	1	1	-inf
chr4	130305547	130305621	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	chr4	131908236	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	7	-1.9196
chr11	98009042	98009078	protein_coding	Fbxl20	intron	ENSMUSG00000020883	ProperStrand	23	chr1	162967527	162967566	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-5.3087
chr10	80640839	80643894	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	5	-1.4650
chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-1.5265
chr13	63612936	63612952	protein_coding	Ptch1	exon	ENSMUSG00000021466	NonProperStrand	118	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	2	-12.1236
chr11	35680751	35680841	protein_coding	Wwc1	exon	ENSMUSG00000018849	ProperStrand	52	chr4	149022372	149022452	protein_coding	Clstn1	utr3	ENSMUSG00000039953	ProperStrand	173	6	-inf
chr2	70499760	70499776	protein_coding	Gorasp2	exon	ENSMUSG00000014959	NonProperStrand	14	chr2	26494742	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-9.7071
chr10	4999647	4999663	protein_coding	Syne1	exon	ENSMUSG00000019769	ProperStrand	49	chr5	108336363	108336410	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-8.6682
chr7	31340875	31340892	protein_coding	Lin37	exon	ENSMUSG00000036845	NonProperStrand	4	chr16	23111413	23111466	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-16.1405
chr15	100618640	100618664	protein_coding	Slc4a8	exon	ENSMUSG00000023032	ProperStrand	15	chr19	41287846	41287862	protein_coding	Tm9sf3	utr3	ENSMUSG00000025016	ProperStrand	21	1	-18.0456
chr11	62418014	62418033	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr6	86475841	86475892	protein_coding	Pcbp1	exon	ENSMUSG00000051695	ProperStrand	108	2	-12.4565
chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	chr12	88778630	88778699	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-3.7705
chr1	72272874	72272964	snRNA	ENSMUSG00000075752_U2	.	ENSMUSG00000075752	ProperStrand	535	chr12	17552950	17553032	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-1.2815
chrX	71589885	71589906	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-3.4287
chr5	122222759	122222775	protein_coding	Atxn2	utr5	ENSMUSG00000042605	ProperStrand	83	chr15	82980133	82980150	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-6.4960
chr7	16534823	16534839	protein_coding	Ehd2	utr3	ENSMUSG00000074364	NonProperStrand	197	chr8	129468746	129468846	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-2.2689
chr5	74489543	74489563	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr14	24251850	24251866	protein_coding	Kcnma1	intron	ENSMUSG00000063142	NonProperStrand	104	1	-4.5573
chr8	26824953	26824970	protein_coding	Whsc1l1	utr3	ENSMUSG00000054823	ProperStrand	36	chr4	116826699	116826765	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-7.8015
chr1	121964511	121964562	protein_coding	Tmem37	exon	ENSMUSG00000050777	ProperStrand	1	chr11	97642999	97643089	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-inf
chr14	57676676	57676692	protein_coding	Gja3	utr5	ENSMUSG00000048582	ProperStrand	34	chr15	79747814	79747899	protein_coding	Cbx7	utr3	ENSMUSG00000053411	ProperStrand	62	1	-14.3942
chr8	125731536	126829428	protein_coding	Gm20388	exon	ENSMUSG00000092329	ProperStrand	295	chr2	158182156	158182277	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	2	-3.7833
chr4	43505657	43505745	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr2	33705459	33705477	protein_coding	Fam125b	intron	ENSMUSG00000038740	ProperStrand	28	2	-7.5090
chr7	38354919	38354935	protein_coding	Zfp536	exon	ENSMUSG00000043456	NonProperStrand	236	chr9	120038466	120038613	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-1.8374
chr7	116082038	116083708	protein_coding	Eif3f	exon	ENSMUSG00000031029	ProperStrand	69	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	4	-11.2611
chr1	145123732	145123812	LINE	Lx6	L1	chr1Lx6145123655	ProperStrand	1	chr1	145123494	145123584	SINE	B1F1	Alu	chr1B1F1145123483	NonProperStrand	1	1	-inf
chr3	61168898	61168914	protein_coding	B430305J03Rik	utr5	ENSMUSG00000053706	ProperStrand	3	chr10	107800720	107800810	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	1	-14.4410
chr14	122346551	122346651	protein_coding	Ubac2	intron	ENSMUSG00000041765	ProperStrand	25	chr19	8798766	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-6.5239
chr16	36722974	36723039	protein_coding	Ildr1	intron	ENSMUSG00000022900	ProperStrand	17	chrX	45788962	45788979	protein_coding	Elf4	intron	ENSMUSG00000031103	NonProperStrand	49	1	-16.3519
chr5	134713818	134713866	protein_coding	Gtf2i	utr3	ENSMUSG00000060261	ProperStrand	41	chr4	131908695	131908785	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.7814
chr1	120579231	120579311	protein_coding	Tfcp2l1	utr3	ENSMUSG00000026380	ProperStrand	158	chr3	123210878	123210968	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-0.7266
chr19	45784413	45784493	Low_complexity	GA-rich	Low_complexity	chr19GA-rich45784435	NonProperStrand	1	chr19	45784166	45784256	SINE	B4A	B4	chr19B4A45783991	ProperStrand	1	1	-inf
chr11	87416311	87416401	protein_coding	Mtmr4	exon	ENSMUSG00000018401	ProperStrand	14	chr4	131865856	131865936	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.3681
chr19	8898087	8898110	protein_coding	Hnrnpul2	exon	ENSMUSG00000071659	ProperStrand	93	chr18	35716754	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-4.3582
chrX	34622711	34624040	protein_coding	Rpl39	exon	ENSMUSG00000079641	ProperStrand	37	chr16	23111777	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.7135
chr13	38747958	38748058	protein_coding	Eef1e1	exon	ENSMUSG00000001707	ProperStrand	7	chr11	69483136	69483190	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-15.7007
chr4	147385125	147385141	protein_coding	Clcn6	exon	ENSMUSG00000029016	ProperStrand	120	chr1	174492230	174492246	protein_coding	Vsig8	exon	ENSMUSG00000049598	ProperStrand	27	1	-13.5366
chr7	51861647	51861665	protein_coding	Myh14	exon	ENSMUSG00000030739	ProperStrand	29	chr7	118219574	118219651	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-5.5787
chr7	20300575	20300763	protein_coding	Tomm40	utr5	ENSMUSG00000002984	ProperStrand	57	chr10	90432659	90432681	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	25	-19.0053
chr17	56565077	56565157	protein_coding	Ptprs	exon	ENSMUSG00000013236	ProperStrand	152	chr1	95304750	95304949	protein_coding	Hdlbp	exon	ENSMUSG00000034088	ProperStrand	97	1	-10.4828
chr17	24857717	24857815	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	chr12	110874223	110874291	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	6	-3.6860
chr5	116045049	116045368	protein_coding	Gcn1l1	exon	ENSMUSG00000041638	ProperStrand	408	chr8	98269959	98269993	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-2.0382
chr10	127003619	127003649	protein_coding	Lrp1	exon	ENSMUSG00000040249	ProperStrand	151	chr17	35299505	35299605	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-3.0568
chr1	108644990	108645010	protein_coding	Kdsr	intron	ENSMUSG00000009905	NonProperStrand	8	chr17	15867956	15868849	protein_coding	Chd1	exon	ENSMUSG00000023852	ProperStrand	82	1	-16.7448
chr13	13598726	13604481	protein_coding	Nid1	utr3	ENSMUSG00000005397	ProperStrand	112	chr4	131908689	131908897	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-1.9356
chr16	31858086	31863263	protein_coding	Dlg1	exon	ENSMUSG00000022770	ProperStrand	69	chrX	12693772	12693788	protein_coding	Usp9x	exon	ENSMUSG00000031010	NonProperStrand	8	1	-17.0706
chr11	84648142	84648180	protein_coding	Ggnbp2	intron	ENSMUSG00000020530	ProperStrand	30	chr4	131908271	131908361	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.5256
chr9	99483993	99484009	protein_coding	Dbr1	exon	ENSMUSG00000032469	ProperStrand	162	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	2	-7.7078
chr9	57435644	57435690	protein_coding	Scamp2	utr3	ENSMUSG00000040188	ProperStrand	12	chr2	130101985	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-8.5919
chr1	75195109	75195125	processed_transcript	Ankzf1	.	ENSMUSG00000026199	ProperStrand	69	chr16	23111386	23111418	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.0727
chr7	117189863	117189953	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr16	18240847	18240927	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	1	-2.3121
chr6	87769189	87769558	protein_coding	Isy1	exon	ENSMUSG00000030056	ProperStrand	172	chr6	71832629	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-3.6026
chr12	86685286	86695755	protein_coding	Tmed10	exon	ENSMUSG00000021248	ProperStrand	34	chr19	8799584	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-7.9015
chr9	120039540	120039630	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	chr7	67125763	67125801	snoRNA	ENSMUSG00000089375_Snord107	.	ENSMUSG00000089375	NonProperStrand	1	1	-inf
chr12	75041495	75041565	protein_coding	Hif1a	exon	ENSMUSG00000021109	ProperStrand	20	chr9	79915104	79915120	protein_coding	Senp6	utr5	ENSMUSG00000034252	ProperStrand	110	1	-14.3341
chr5	136443864	136443881	protein_coding	Srcrb4d	exon	ENSMUSG00000029699	ProperStrand	9	chr10	90432660	90432680	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	1	-14.4973
chr7	30026273	30026289	protein_coding	Yif1b	intron	ENSMUSG00000030588	ProperStrand	154	chr18	75161533	75161598	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-5.3484
chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	chr4	116827120	116827146	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-1.3021
chr14	60998023	60998039	protein_coding	Fam123a	exon	ENSMUSG00000021986	ProperStrand	13	chr9	120039626	120039663	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-6.2868
chr9	40100991	40101010	protein_coding	Gramd1b	utr3	ENSMUSG00000040111	NonProperStrand	12	chr8	60437146	60437162	protein_coding	Galntl6	exon	ENSMUSG00000061864	ProperStrand	44	1	-17.2847
chr16	72800514	72800532	protein_coding	Robo1	intron	ENSMUSG00000022883	NonProperStrand	188	chr7	117189863	117189909	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	3	-9.7179
chr17	69732682	69732700	protein_coding	Zfp161	utr5	ENSMUSG00000049672	ProperStrand	15	chr11	6428109	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.8593
chr13	45096115	45096131	protein_coding	Dtnbp1	intron	ENSMUSG00000057531	ProperStrand	17	chr2	22445070	22445097	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-10.3285
chr16	91642024	91642090	protein_coding	Gart	intron	ENSMUSG00000022962	ProperStrand	200	chr4	131865868	131865888	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-2.2544
chr9	108395965	108398672	protein_coding	Usp19	exon	ENSMUSG00000006676	ProperStrand	57	chr17	24857717	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	3	-6.3641
chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	chr9	103401280	103401296	protein_coding	Tmem108	exon	ENSMUSG00000042757	NonProperStrand	323	1	-7.4018
chr8	13159281	13159312	protein_coding	Lamp1	utr5	ENSMUSG00000031447	ProperStrand	92	chr4	131908356	131908438	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.8590
chr4	59498216	59498550	protein_coding	Rod1	exon	ENSMUSG00000028382	ProperStrand	52	chr12	112779254	112779282	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	6	-19.3759
chr2	154472258	154472274	protein_coding	Zfp341	utr3	ENSMUSG00000059842	NonProperStrand	7	chr4	106585524	106585810	protein_coding	Ssbp3	exon	ENSMUSG00000061887	ProperStrand	36	1	-18.3494
chr1	93263065	93263081	protein_coding	Fam132b	exon	ENSMUSG00000047443	NonProperStrand	98	chr3	123210854	123210894	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.3215
chr1	165882275	165882333	protein_coding	Scyl3	exon	ENSMUSG00000026584	ProperStrand	24	chr7	20119703	20119719	protein_coding	Ppp1r37	intron	ENSMUSG00000051403	NonProperStrand	1	1	-inf
chr3	153574633	153574654	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	chr7	52381719	52381772	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	2	-6.7652
chr10	127003619	127003649	protein_coding	Lrp1	exon	ENSMUSG00000040249	ProperStrand	151	chr7	150717297	150717348	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-3.7441
chr2	24825186	24827046	protein_coding	Wdr85	exon	ENSMUSG00000026975	ProperStrand	323	chr8	73419666	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-2.2485
chrX	70237450	70237471	miRNA	Mir2137	.	ENSMUSG00000089357	ProperStrand	50	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-8.0921
chr10	126518720	126518739	protein_coding	Agap2	intron	ENSMUSG00000025422	NonProperStrand	22	chr5	122018978	122020618	protein_coding	Aldh2	exon	ENSMUSG00000029455	ProperStrand	108	4	-inf
chr11	101645784	101645808	protein_coding-noncoding	Etv4	utr3	ENSMUSG00000017724	NonProperStrand	9	chr7	118219574	118219633	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-7.9598
chr5	30507490	30507569	protein_coding	Hadhb	exon	ENSMUSG00000059447	ProperStrand	7	chr16	23110900	23110956	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-9.3151
chr7	29171541	29171558	protein_coding	Med29	utr3	ENSMUSG00000003444	NonProperStrand	134	chr14	76247753	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	3	-7.0172
chr2	32089348	32089438	protein_coding	Prrc2b	utr3	ENSMUSG00000039262	ProperStrand	344	chr15	34370550	34370630	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-0.8092
chr9	45405449	45405469	protein_coding	Dscaml1	intron	ENSMUSG00000032087	NonProperStrand	10	chr12	110918155	110918221	snoRNA	ENSMUSG00000065749_AF357428	.	ENSMUSG00000065749	ProperStrand	218	2	-20.5395
chr6	136600285	136600301	protein_coding	Plbd1	exon	ENSMUSG00000030214	NonProperStrand	5	chr1	162968458	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	2	-17.9896
chr9	15130708	15131005	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	chr1	162967507	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-1.0308
chrX	33607698	33607715	protein_coding	Dock11	exon	ENSMUSG00000031093	ProperStrand	42	chr2	26768049	26768106	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	2	-14.4462
chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	chr11	106362568	106362635	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-3.7058
chr10	90586333	90586423	protein_coding	Slc25a3	exon	ENSMUSG00000061904	ProperStrand	74	chr17	24857749	24857829	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.9536
chr18	34368934	34368950	pseudogene	Gm10548	.	ENSMUSG00000073607	NonProperStrand	6	chr16	23111748	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-10.4591
chr16	20654946	20655006	protein_coding	Psmd2	exon	ENSMUSG00000006998	ProperStrand	99	chr17	35299548	35299641	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	5	-15.8571
chr15	98350179	98350282	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	chr1	173041632	173041649	tRNA	tRNA710-ValCAC	.	518602	ProperStrand	206	2	-4.3952
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr11	102773750	102774271	protein_coding	Kif18b	exon	ENSMUSG00000051378	ProperStrand	43	1	-9.5094
chr14	99698192	99698233	protein_coding	Klf5	utr5	ENSMUSG00000005148	ProperStrand	39	chrX	136060241	136060259	protein_coding	D330045A20Rik	intron	ENSMUSG00000042498	ProperStrand	1	1	-inf
chr9	106383502	106383520	protein_coding	Rrp9	exon	ENSMUSG00000041506	ProperStrand	32	chr10	23505193	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.1928
chr6	120432385	120432401	protein_coding	Il17ra	exon	ENSMUSG00000002897	ProperStrand	61	chr13	3555689	3555714	protein_coding	Gdi2	exon	ENSMUSG00000021218	ProperStrand	49	1	-13.6892
chr8	109898489	109898565	protein_coding	Nfat5	utr3	ENSMUSG00000003847	ProperStrand	29	chr2	26494710	26494800	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.4659
chrX	20246375	20257974	protein_coding	Uba1	exon	ENSMUSG00000001924	ProperStrand	156	chr4	131908236	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	5	-3.2935
chr15	79502653	79502718	protein_coding	Tomm22	exon	ENSMUSG00000022427	ProperStrand	7	chr13	55589253	55589269	protein_coding	Dbn1	exon	ENSMUSG00000034675	ProperStrand	43	1	-18.6393
chr6	125613045	125615142	protein_coding	Vwf	exon	ENSMUSG00000001930	NonProperStrand	7	chrX	39208757	39208778	protein_coding	Thoc2	intron	ENSMUSG00000037475	ProperStrand	30	1	-20.3420
chr12	112565198	112565215	protein_coding	Cdc42bpb	intron	ENSMUSG00000021279	ProperStrand	128	chr2	79294540	79294593	protein_coding	Neurod1	exon	ENSMUSG00000034701	ProperStrand	7	1	-16.2314
chr17	30731165	30737773	protein_coding	Glo1	exon	ENSMUSG00000024026	ProperStrand	75	chr10	23505152	23505278	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-1.8898
chr18	35716835	35716891	lincRNA	Snhg4	intron	ENSMUSG00000090430	ProperStrand	270	chr19	8963105	8963124	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-0.8164
chr14	35315635	35315651	antisense	Gm17110	.	ENSMUSG00000090779	ProperStrand	1	chr1	173531241	173531257	protein_coding	Ly9	exon	ENSMUSG00000004707	ProperStrand	7	1	-inf
chr1	127491938	127491955	protein_coding	Slc35f5	utr3	ENSMUSG00000026342	ProperStrand	70	chr6	88466181	88466199	protein_coding	Sec61a1	intron	ENSMUSG00000030082	ProperStrand	46	1	-13.5427
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr11	51551339	51551424	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	1	-2.4101
chr8	59966247	59966347	protein_coding	Sap30	exon	ENSMUSG00000031609	ProperStrand	16	chr11	68887046	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-6.7426
chr12	58691976	58691992	antisense	4921518K17Rik	.	ENSMUSG00000085851	ProperStrand	75	chr3	88715213	88715230	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-6.7909
chr2	130329822	130329892	protein_coding	Ptpra	exon	ENSMUSG00000027303	ProperStrand	24	chr4	131908809	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.6746
chr14	76247712	76247842	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	chr2	26494701	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	39	-1.7226
chr13	96120805	96120822	protein_coding	Aggf1	utr3	ENSMUSG00000021681	NonProperStrand	5	chr16	23110931	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-15.9111
chr6	34437682	34437698	protein_coding	Bpgm	exon	ENSMUSG00000038871	ProperStrand	8	chr6	71832629	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-9.7064
chr2	153237506	153237522	protein_coding	8430427H17Rik	exon	ENSMUSG00000061411	NonProperStrand	19	chr5	121655100	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.9783
chr6	108805740	108806418	protein_coding	Edem1	utr3	ENSMUSG00000030104	ProperStrand	18	chr7	29136589	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	7	-19.3118
chr7	148634710	148634800	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	chr12	110918157	110918221	snoRNA	ENSMUSG00000065749_AF357428	.	ENSMUSG00000065749	ProperStrand	218	1	-1.7437
chr15	79913288	79913346	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr3	88497863	88497910	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	5	-1.0466
chr4	129305202	129305233	protein_coding	Txlna	utr3	ENSMUSG00000053841	ProperStrand	37	chr15	79913298	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.5050
chr11	116535927	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr1	181476938	181476963	protein_coding	Cnst	intron	ENSMUSG00000038949	ProperStrand	40	2	-10.8485
chr5	114192993	114193066	protein_coding	Sart3	utr3	ENSMUSG00000018974	ProperStrand	50	chr11	102294588	102294610	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	1	-9.2598
chr6	115757996	115758096	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr8	112363241	112363275	snoRNA	ENSMUSG00000077549_Snord71	.	ENSMUSG00000077549	ProperStrand	196	1	-3.2344
chr17	25296587	25296603	protein_coding	Clcn7	exon	ENSMUSG00000036636	ProperStrand	94	chr2	144087414	144087462	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-5.6621
chr15	100048451	100048467	protein_coding	Dip2b	utr3	ENSMUSG00000023026	ProperStrand	48	chr8	129468746	129468840	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-4.8424
chr4	117811168	117811476	protein_coding	Kdm4a	exon	ENSMUSG00000033326	ProperStrand	81	chr1	162968442	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-5.4906
chr19	4918067	4918095	protein_coding	Dpp3	exon	ENSMUSG00000063904	ProperStrand	36	chr16	23110905	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.8249
chr11	6517984	6518013	protein_coding	Tbrg4	exon	ENSMUSG00000000384	ProperStrand	24	chr1	136523892	136525187	protein_coding	Kdm5b	utr5	ENSMUSG00000042207	ProperStrand	223	1	-12.5362
chr2	178217044	178217061	protein_coding	Cdh26	intron	ENSMUSG00000039155	NonProperStrand	77	chr12	17553062	17553087	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-4.6083
chr14	51546247	51546324	protein_coding	Apex1	exon	ENSMUSG00000035960	ProperStrand	6	chr11	6428035	6428098	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-7.7732
chr17	85169726	85169773	protein_coding	Lrpprc	exon	ENSMUSG00000024120	ProperStrand	98	chr1	88252838	88252901	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	4	-17.1760
chr10	33729721	33729742	protein_coding	Rwdd1	intron	ENSMUSG00000019782	NonProperStrand	3	chr19	8800378	8800468	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-9.7434
chr11	88706746	88706815	protein_coding	Akap1	exon	ENSMUSG00000018428	ProperStrand	45	chr18	73693165	73693184	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-6.0897
chr12	77404920	77408250	protein_coding	Mthfd1	exon	ENSMUSG00000021048	ProperStrand	71	chr16	23111690	23111753	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	5	-8.7115
chr7	88529496	88529520	protein_coding	Cpeb1	intron	ENSMUSG00000025586	NonProperStrand	29	chr4	131908234	131908276	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.5844
chr15	98604924	98606960	protein_coding	Wnt10b	exon	ENSMUSG00000022996	NonProperStrand	189	chr19	8800355	8800416	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-1.5872
chr5	32794878	32794934	protein_coding	Ppp1cb	utr3	ENSMUSG00000014956	ProperStrand	25	chr18	33954903	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	3	-12.2542
chr11	95001819	95001837	protein_coding	Dlx4	utr3	ENSMUSG00000020871	NonProperStrand	3	chr8	32260391	32260426	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-10.9171
chr9	36542953	36543025	protein_coding	Stt3a	exon	ENSMUSG00000032116	ProperStrand	31	chr1	89681373	89681396	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-6.7466
chr3	157729963	157729979	protein_coding	Lrrc40	utr3	ENSMUSG00000063052	ProperStrand	147	chr4	116828379	116828453	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-6.6011
chr7	26472435	26472451	protein_coding	Tgfb1	utr5	ENSMUSG00000002603	NonProperStrand	154	chr15	79908957	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-3.6752
chr8	113566272	113566581	protein_coding	Aars	exon	ENSMUSG00000031960	ProperStrand	355	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-4.2560
chr2	147009105	147009122	protein_coding	Nkx2-2	utr3	ENSMUSG00000027434	NonProperStrand	84	chr4	131908689	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	7	-8.8533
chr11	68067261	68067277	protein_coding	Ntn1	intron	ENSMUSG00000020902	NonProperStrand	194	chr11	69481390	69481432	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-1.2896
chr16	11144137	11144277	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr4	57599714	57599732	protein_coding	Palm2	intron	ENSMUSG00000090053	ProperStrand	17	1	-13.0225
chr1	38108391	38108491	protein_coding	Eif5b	intron	ENSMUSG00000026083	NonProperStrand	3	chr4	131908700	131908739	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-6.9471
chr18	10052133	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr9	120037910	120038000	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	7	-9.4161
chr11	101387783	101387830	protein_coding	Brca1	exon	ENSMUSG00000017146	ProperStrand	51	chr10	82456767	82456785	protein_coding	Chst11	intron	ENSMUSG00000034612	ProperStrand	170	1	-11.5513
chr11	58133376	58133430	protein_coding	Zfp672	utr5	ENSMUSG00000049755	ProperStrand	4	chr2	26493391	26493485	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	4	-inf
chr12	37094542	37094560	LINE	Lx4B	L1	chr12Lx4B37094300	ProperStrand	3	chr18	67248126	67248144	protein_coding	Gnal	utr5	ENSMUSG00000024524	ProperStrand	6	1	-inf
chr17	56247427	56247456	protein_coding	Plin4	intron	ENSMUSG00000002831	NonProperStrand	4	chr3	88497853	88497983	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	3	-19.8228
chr11	117756015	117756031	SINE	B3	B2	chr11B3117755952	NonProperStrand	2	chr3	86723755	86723804	protein_coding	Dclk2	exon	ENSMUSG00000028078	ProperStrand	50	1	-20.7859
chr16	13598082	13598192	protein_coding	Parn	intron	ENSMUSG00000022685	ProperStrand	30	chr2	63936034	63936053	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-9.2550
chr14	51463983	51463999	protein_coding	Tep1	exon	ENSMUSG00000006281	NonProperStrand	73	chr9	109989169	109989443	protein_coding	Dhx30	exon	ENSMUSG00000032480	ProperStrand	29	1	-14.3987
chr15	83977516	83977606	LTR	IAPEz-int	ERVK	chr15IAPEz-int83977397	NonProperStrand	1	chr15	83977285	83977375	LTR	IAPLTR2_Mm	ERVK	chr15IAPLTR2_Mm83976968	NonProperStrand	1	1	-inf
chr4	117810230	117810262	protein_coding	Kdm4a	utr3	ENSMUSG00000033326	ProperStrand	81	chr12	109512950	109513050	protein_coding	Ccdc85c	exon	ENSMUSG00000084883	ProperStrand	157	1	-10.7796
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr16	56035948	56036001	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	1	-4.5029
chr13	74494655	74494671	protein_coding	Ccdc127	utr3	ENSMUSG00000021578	NonProperStrand	54	chr11	69483136	69483234	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.6309
chr8	32929075	32929092	protein_coding	Nrg1	exon	ENSMUSG00000062991	NonProperStrand	6	chr19	8798484	8798531	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-9.9170
chr5	33369478	33369527	protein_coding	Ywhah	exon	ENSMUSG00000018965	ProperStrand	81	chr13	41107704	41107758	protein_coding	Pak1ip1	exon	ENSMUSG00000038683	ProperStrand	49	2	-inf
chr13	9833552	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chrX	71517838	71517951	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	4	-1.1546
chr6	114260511	114260527	protein_coding	Slc6a1	exon	ENSMUSG00000030310	NonProperStrand	147	chr8	108607779	108607847	protein_coding	Nfatc3	exon	ENSMUSG00000031902	ProperStrand	75	2	-17.4732
chr11	101833237	101833253	protein_coding	Dusp3	utr3	ENSMUSG00000003518	NonProperStrand	8	chr12	41947224	41947240	protein_coding	Immp2l	intron	ENSMUSG00000056899	ProperStrand	21	1	-18.3903
chr8	125741087	125741105	protein_coding	4732415M23Rik	intron	ENSMUSG00000048478	ProperStrand	88	chr5	93585722	93585784	protein_coding	Sept11	intron	ENSMUSG00000058013	ProperStrand	79	2	-18.5660
chr19	13284146	13284162	LINE	Lx3_Mus	L1	chr19Lx3_Mus13284039	ProperStrand	4	chr19	6058160	6058176	protein_coding	Fau	intron	ENSMUSG00000038274	ProperStrand	64	1	-18.6464
chr12	68768916	68769006	LINE	L1Md_F2	L1	chr12L1Md_F268768613	ProperStrand	13	chr9	116110766	116110856	LINE	L1_Mus2	L1	chr9L1_Mus2116110631	ProperStrand	1	1	-inf
chr10	116661368	116661426	protein_coding	Yeats4	utr5	ENSMUSG00000020171	ProperStrand	10	chr2	146910910	146910926	protein_coding	Nkx2-4	exon	ENSMUSG00000054160	NonProperStrand	3	1	-inf
chr12	28927685	28927775	LINE	L1Md_F2	L1	chr12L1Md_F228927269	NonProperStrand	1	chr12	68768748	68768838	LINE	L1Md_F2	L1	chr12L1Md_F268768613	NonProperStrand	12	1	-inf
chr5	104864192	104865406	protein_coding	Spp1	utr5	ENSMUSG00000029304	ProperStrand	52	chr2	109516160	109516176	protein_coding	Bdnf	utr5	ENSMUSG00000048482	NonProperStrand	47	1	-14.0988
chr5	82023885	82023907	protein_coding	Lphn3	intron	ENSMUSG00000037605	ProperStrand	19	chr19	6058432	6058467	protein_coding	Fau	exon	ENSMUSG00000038274	ProperStrand	64	1	-15.5219
chr10	44158771	44158788	protein_coding	Prdm1	utr3	ENSMUSG00000038151	NonProperStrand	16	chr9	64024466	64024551	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	9	-19.1332
chr2	152089002	152098443	protein_coding	Csnk2a1	exon	ENSMUSG00000074698	ProperStrand	91	chr17	35088971	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-5.0555
chr1	158636293	158649018	protein_coding	Fam20b	utr5	ENSMUSG00000033557	ProperStrand	15	chr2	38859689	38860307	protein_coding	Rpl35	exon	ENSMUSG00000062997	ProperStrand	68	2	-inf
chr4	123073232	123075079	protein_coding	Macf1	exon	ENSMUSG00000028649	ProperStrand	320	chr8	73419664	73419729	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-2.2737
chr18	73818536	73822395	protein_coding	Smad4	exon	ENSMUSG00000024515	ProperStrand	51	chr19	8963027	8963092	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.5507
chr8	89269737	89269754	protein_coding	Siah1a	utr5	ENSMUSG00000036840	ProperStrand	6	chr17	27639896	27639913	protein_coding	Grm4	exon	ENSMUSG00000063239	ProperStrand	147	1	-16.2507
chr3	94442907	94442997	protein_coding	Tuft1	intron	ENSMUSG00000005968	ProperStrand	13	chr17	13112470	13112550	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	8	-19.3301
chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	chr5	121655100	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-1.3372
chr1	120676096	120676186	LTR	ORR1A2	MaLR	chr1ORR1A2120676114	ProperStrand	1	chr9	72410869	72410959	protein_coding	Rfx7	intron	ENSMUSG00000037674	NonProperStrand	3	1	-inf
chrX	156312568	156315519	protein_coding	Sh3kbp1	intron	ENSMUSG00000040990	ProperStrand	67	chr9	15119650	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-4.3155
chr8	3803148	3803203	misc_RNA	RNaseP_nuc	.	ENSMUSG00000088025	ProperStrand	328	chr19	17900101	17900117	snoRNA	ENSMUSG00000089540_snoU13	.	ENSMUSG00000089540	ProperStrand	99	1	-8.9058
chrX	96245298	96245316	protein_coding	Stard8	intron	ENSMUSG00000031216	ProperStrand	142	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-6.0341
chr5	136707644	136707662	protein_coding	Sh2b2	exon	ENSMUSG00000005057	NonProperStrand	101	chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	1	-8.4461
chr2	71718137	71718167	protein_coding	Pdk1	exon	ENSMUSG00000006494	ProperStrand	37	chr8	73419683	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-6.7795
chr7	133702387	133702438	protein_coding	Eif3c	exon	ENSMUSG00000030738	ProperStrand	92	chr19	29678580	29678596	protein_coding	C030046E11Rik	exon	ENSMUSG00000038658	ProperStrand	104	1	-11.3496
chr11	69793530	69793610	protein_coding-noncoding	Rai12	utr3	ENSMUSG00000018565	NonProperStrand	1	chr11	69793707	69793797	protein_coding	Rai12	utr5	ENSMUSG00000018565	NonProperStrand	10	1	-inf
chr8	74022294	74030741	protein_coding	Plvap	utr3	ENSMUSG00000034845	ProperStrand	27	chr11	77995191	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-7.7765
chr11	83461733	83461751	protein_coding	Ccl3	utr3	ENSMUSG00000000982	ProperStrand	2	chr16	23110840	23110860	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr11	5689100	5689133	protein_coding	Dbnl	intron	ENSMUSG00000020476	ProperStrand	16	chr16	23111392	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-8.8328
chr10	126504217	126504307	protein_coding	Cdk4	utr3	ENSMUSG00000006728	ProperStrand	47	chr14	76247721	76247801	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-4.6383
chr17	46861595	46861611	protein_coding	Pex6	exon	ENSMUSG00000002763	ProperStrand	292	chr16	18919150	18919175	protein_coding	Hira	exon	ENSMUSG00000022702	ProperStrand	28	1	-11.6821
chr2	26766780	26766803	snoRNA	ENSMUSG00000065258_SNORD24	.	ENSMUSG00000065258	ProperStrand	130	chr11	69483136	69483194	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-2.3981
chr4	43505733	43505823	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr18	6201433	6201470	protein_coding	Kif5b	utr3	ENSMUSG00000006740	ProperStrand	65	1	-2.9274
chr8	13159389	13159405	protein_coding	Lamp1	exon	ENSMUSG00000031447	ProperStrand	92	chr11	68886963	68887053	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	2	-5.7213
chr10	6063959	6063978	protein_coding	Akap12	intron	ENSMUSG00000038587	ProperStrand	1008	chr10	23506278	23506348	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	2	-3.1964
chr14	72301755	72301771	SINE	B4	B4	chr14B472301692	NonProperStrand	99	chr7	13516151	13516198	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	1	-7.6663
chr11	100182060	100182112	protein_coding	Eif1	exon	ENSMUSG00000035530	ProperStrand	115	chr8	73419657	73419729	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.0157
chr5	31392071	31392442	protein_coding	Slc30a3	exon	ENSMUSG00000029151	ProperStrand	112	chr16	23110902	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-0.7154
chr12	16554294	16554367	protein_coding	Lpin1	exon	ENSMUSG00000020593	ProperStrand	15	chr15	101914600	101914656	protein_coding	Eif4b	exon	ENSMUSG00000058655	ProperStrand	484	1	-11.9509
chr14	30851615	30851631	protein_coding	Chdh	utr3	ENSMUSG00000015970	ProperStrand	50	chr7	117189930	117189971	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.6682
chr4	118293979	118294004	protein_coding	Ebna1bp2	exon	ENSMUSG00000028729	ProperStrand	18	chr15	76917287	76917349	protein_coding	Rbfox2	intron	ENSMUSG00000033565	ProperStrand	55	1	-15.9007
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr7	109149271	109149287	protein_coding	Numa1	exon	ENSMUSG00000066306	NonProperStrand	171	2	-8.4986
chr3	20164722	20164802	protein_coding	Cpb1	intron	ENSMUSG00000011463	NonProperStrand	6	chr3	19568788	19568878	protein_coding	Trim55	intron	ENSMUSG00000060913	NonProperStrand	2	1	-inf
chr1	88252837	88252899	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	chr14	76247722	76247790	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	5	-0.8132
chr19	7416266	7416292	protein_coding	Mark2	utr5	ENSMUSG00000024969	ProperStrand	75	chr11	116847174	116847191	protein_coding	Mgat5b	utr3	ENSMUSG00000043857	NonProperStrand	15	1	-15.6910
chr8	92021136	92021152	LTR	ORR1A4	MaLR	chr8ORR1A492020974	NonProperStrand	4	chr3	94923093	94923121	protein_coding	Vps72	exon	ENSMUSG00000008958	ProperStrand	6	1	-19.4007
chr16	37384897	37384913	protein_coding	Stxbp5l	utr5	ENSMUSG00000022829	ProperStrand	332	chrX	84483703	84483732	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-4.8833
chr5	148113281	148113297	protein_coding	Cdx2	utr3	ENSMUSG00000029646	ProperStrand	276	chr14	31984996	31985012	protein_coding	Tnnc1	intron	ENSMUSG00000091898	ProperStrand	9	1	-14.1458
chr7	138459653	138459669	protein_coding	Cuzd1	exon	ENSMUSG00000040205	NonProperStrand	59	chr16	23110828	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-0.8243
chr10	127521199	127521269	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	chr11	51551273	51551335	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	1	-3.3403
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr18	33954826	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	9	-8.4382
chr8	123197899	123197918	protein_coding	Cox4i1	exon	ENSMUSG00000031818	ProperStrand	31	chr18	31919716	31919732	protein_coding	Ammecr1l	utr5	ENSMUSG00000041915	NonProperStrand	2	1	-inf
chr17	35138507	35141990	protein_coding	Vars	exon	ENSMUSG00000007029	ProperStrand	121	chr9	64022856	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	2	-10.7001
chr13	97896983	97897083	protein_coding	Fam169a	utr3	ENSMUSG00000041817	ProperStrand	12	chr11	77996560	77996615	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-9.3442
chr4	131865854	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	NonProperStrand	39	chr16	23110828	23110857	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	NonProperStrand	93	1	-13.3024
chr10	79493538	79493554	protein_coding	Hmha1	exon	ENSMUSG00000035697	NonProperStrand	23	chr6	115757995	115758048	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-7.3783
chr1	164622615	164622670	protein_coding	Prrc2c	exon	ENSMUSG00000040225	ProperStrand	413	chr14	33005108	33005152	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	5	-5.6842
chr8	3604315	3604338	protein_coding	Camsap3	exon	ENSMUSG00000044433	ProperStrand	86	chr11	77995187	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-5.4766
chr12	112565198	112565215	protein_coding	Cdc42bpb	intron	ENSMUSG00000021279	ProperStrand	128	chr19	8799581	8799641	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-5.2792
chr11	21040584	21040600	protein_coding	Peli1	exon	ENSMUSG00000020134	ProperStrand	69	chr11	106362638	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-7.1263
chr8	13416897	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr3	96488991	96489010	protein_coding	Ankrd35	exon	ENSMUSG00000038354	ProperStrand	5	1	-11.5948
chr13	9833561	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr9	32008461	32008478	protein_coding	Arhgap32	intron	ENSMUSG00000041444	ProperStrand	37	1	-5.9002
chr10	12102500	12102539	protein_coding	Utrn	utr3	ENSMUSG00000019820	ProperStrand	69	chr2	26493369	26493497	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-5.9328
chr2	164620586	164620656	protein_coding	Acot8	exon	ENSMUSG00000017307	ProperStrand	9	chr19	8963076	8963166	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.8692
chr6	48571820	48571837	protein_coding	Zfp775	utr3	ENSMUSG00000007216	NonProperStrand	2	chr4	131908299	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-8.3123
chr8	127212779	127212869	protein_coding	Ttc13	exon	ENSMUSG00000037300	ProperStrand	20	chr3	88497863	88497943	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-9.6763
chr14	25673634	25673651	DNA	MER63D	AcHobo	chr14MER63D25673510	NonProperStrand	65	chr7	118219704	118219740	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-4.0194
chr17	45705316	45705377	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr7	112782969	112782985	protein_coding	Arfip2	utr3	ENSMUSG00000030881	ProperStrand	191	1	-4.4748
chr5	104263105	104263195	protein_coding	Aff1	exon	ENSMUSG00000029313	ProperStrand	82	chr17	39985321	39985401	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-5.3211
chr2	27302456	27302474	protein_coding	Brd3	utr3	ENSMUSG00000026918	NonProperStrand	5	chr2	32818802	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-10.5887
chr2	164286640	164286657	protein_coding	Sys1	intron	ENSMUSG00000045503	ProperStrand	6	chr16	23110457	23110557	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-6.9463
chr14	20451772	20451789	LTR	IAPLTR3-int	ERVK	chr14IAPLTR3-int20447903	ProperStrand	44	chr11	62416599	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-5.7731
chr8	34497266	34497356	protein_coding	Purg	exon	ENSMUSG00000049184	ProperStrand	3	chr4	131908262	131908342	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-7.2242
chr4	132879358	132879377	protein_coding	Wdtc1	intron	ENSMUSG00000037622	ProperStrand	81	chr17	24832290	24832338	protein_coding	Gfer	exon	ENSMUSG00000040888	ProperStrand	2	1	-inf
chr8	13416897	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr3	87539064	87539081	protein_coding	Arhgef11	intron	ENSMUSG00000041977	ProperStrand	16	1	-9.1173
chr15	36538181	36538271	protein_coding	Pabpc1	utr5	ENSMUSG00000022283	ProperStrand	908	chr7	134342339	134342419	protein_coding	Tbc1d10b	exon	ENSMUSG00000042492	ProperStrand	187	23	-inf
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr3	85942712	85942776	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	1	-5.8102
chr6	118379976	118379994	protein_coding	Zfp248	exon	ENSMUSG00000030145	ProperStrand	19	chr6	115758072	115758120	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-7.7658
chr6	81992905	81992922	protein_coding	Fam176a	intron	ENSMUSG00000035104	ProperStrand	64	chr9	85637591	85637607	protein_coding	Ibtk	utr5	ENSMUSG00000035941	NonProperStrand	22	1	-15.2065
chr19	25174678	25174697	protein_coding	Dock8	intron	ENSMUSG00000052085	ProperStrand	9	chr1	89673615	89673715	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-6.9863
chr2	128197881	128197897	lincRNA	Gm14005	exon	ENSMUSG00000074813	ProperStrand	6	chr13	49779667	49779742	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-11.7576
chr14	55233209	55233245	protein_coding	Psmb5	exon	ENSMUSG00000022193	ProperStrand	14	chr11	62418018	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	4	-inf
chr7	17434192	17434393	protein_coding	Prkd2	exon	ENSMUSG00000041187	ProperStrand	9	chr11	62416623	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-8.9986
chr17	45705839	45705929	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chrX	76868989	76869069	protein_coding	Mageb16	utr3	ENSMUSG00000046942	ProperStrand	4	1	-12.3862
chr2	71096256	71098941	protein_coding	Dync1i2	exon	ENSMUSG00000027012	ProperStrand	35	chr7	116664810	116664900	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	7	-inf
chr7	140901107	140901207	protein_coding	Bccip	exon	ENSMUSG00000030983	ProperStrand	19	chr7	51505237	51505308	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	1	-10.4773
chr2	25077784	25078080	protein_coding	Tubb4b	utr3	ENSMUSG00000036752	ProperStrand	58	chr16	23110964	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-0.8495
chr4	101137733	101137823	protein_coding	Ak4	utr3	ENSMUSG00000028527	ProperStrand	20	chr1	162965531	162965554	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.3741
chr13	10453248	10453265	lincRNA	Gm16950	intron	ENSMUSG00000086178	ProperStrand	8	chr13	49779667	49779711	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-11.1347
chr2	154689560	154689664	protein_coding	Raly	exon	ENSMUSG00000027593	ProperStrand	116	chr16	23109060	23109093	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-5.9786
chr19	36953817	36953907	protein_coding	Tnks2	exon	ENSMUSG00000024811	ProperStrand	133	chr3	121160458	121160538	protein_coding	Cnn3	utr3	ENSMUSG00000053931	ProperStrand	77	1	-11.2136
chr8	11824565	11824581	protein_coding	Arhgef7	exon	ENSMUSG00000031511	NonProperStrand	4	chr17	24857750	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-7.6570
chr6	114966777	114966838	protein_coding	1500001M20Rik	intron	ENSMUSG00000030316	ProperStrand	6	chr16	23110977	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.7876
chr7	24779190	24779213	SINE	ID_B1	B4	chr7ID_B124779183	NonProperStrand	54	chr10	40791279	40791295	protein_coding	Gpr6	exon	ENSMUSG00000046922	ProperStrand	26	1	-15.2089
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr17	12585298	12585314	protein_coding	Plg	intron	ENSMUSG00000059481	NonProperStrand	3	1	-14.1035
chr19	44188388	44188488	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr6	71832551	71832582	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	3	-2.9192
chr1	183047086	183047105	protein_coding	Nvl	intron	ENSMUSG00000026516	ProperStrand	89	chr9	120038609	120038651	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.3534
chr9	61774361	61774405	protein_coding	Kif23	intron	ENSMUSG00000032254	ProperStrand	41	chr18	35716766	35716856	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-7.3257
chr4	133416735	133416777	protein_coding	Rps6ka1	exon	ENSMUSG00000003644	ProperStrand	68	chr3	68889154	68889244	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-3.0313
chr10	122002845	122002935	LINE	L1Md_F2	L1	chr10L1Md_F2122002095	NonProperStrand	23	chr2	90450311	90450401	LINE	L1Md_F2	L1	chr2L1Md_F290444938	NonProperStrand	2	1	-inf
chr2	31652494	31652525	protein_coding	Abl1	exon	ENSMUSG00000026842	ProperStrand	131	chr4	131866155	131866245	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-2.2829
chr8	69606672	69606762	LTR	RMER4B	ERVK	chr8RMER4B69606573	NonProperStrand	1	chr14	60513498	60513588	protein_coding	Atp8a2	intron	ENSMUSG00000021983	NonProperStrand	23	1	-inf
chr16	85802547	85802564	protein_coding	Adamts1	exon	ENSMUSG00000022893	ProperStrand	102	chr5	150563346	150563363	protein_coding	B3galtl	utr3	ENSMUSG00000051950	ProperStrand	29	1	-13.7211
chr7	108078644	108078734	protein_coding	Arhgef17	exon	ENSMUSG00000032875	ProperStrand	33	chr4	131865856	131865936	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-4.8432
chrX	148694893	148694911	protein_coding	Kdm5c	intron	ENSMUSG00000025332	NonProperStrand	3	chr8	98269964	98270036	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-11.8636
chr6	91839620	91839637	protein_coding	C130022K22Rik	intron	ENSMUSG00000034083	ProperStrand	12	chr14	20759794	20759819	protein_coding	Gng2	intron	ENSMUSG00000043004	ProperStrand	15	1	-19.3113
chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr10	38878114	38878130	protein_coding	Wisp3	exon	ENSMUSG00000062074	NonProperStrand	2	1	-15.2142
chr10	79292940	79293040	protein_coding	9130017N09Rik	utr3	ENSMUSG00000035852	ProperStrand	1	chr1	87983953	87983997	snoRNA	ENSMUSG00000077274_SNORA26	.	ENSMUSG00000077274	ProperStrand	361	1	-inf
chr4	48675601	48675617	protein_coding	Tmeff1	utr3	ENSMUSG00000028347	ProperStrand	47	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-10.9203
chr5	148113281	148113297	protein_coding	Cdx2	utr3	ENSMUSG00000029646	ProperStrand	276	chr5	128187788	128187817	protein_coding	Glt1d1	utr3	ENSMUSG00000049971	ProperStrand	13	1	-13.3729
chr11	106429382	106429458	protein_coding	Tex2	exon	ENSMUSG00000040548	ProperStrand	24	chrX	84483719	84483736	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-10.0981
chr5	42136455	42136473	Low_complexity	GA-rich	Low_complexity	chr5GA-rich42136449	NonProperStrand	106	chr4	113307180	113307197	protein_coding	Skint5	intron	ENSMUSG00000078598	NonProperStrand	4	1	-17.7101
chr10	82359339	82359439	protein_coding	Txnrd1	utr3	ENSMUSG00000020250	ProperStrand	47	chr9	15118246	15118317	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.9207
chr14	26478171	26478188	protein_coding	Zmiz1	intron	ENSMUSG00000007817	ProperStrand	34	chr5	108336375	108336406	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-5.9928
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr1	152268927	152269668	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	1	-3.5327
chr8	126478276	126478315	protein_coding	Abcb10	exon	ENSMUSG00000031974	ProperStrand	13	chr5	147646458	147646477	snoRNA	ENSMUSG00000077185_SNORD102	.	ENSMUSG00000077185	ProperStrand	142	1	-14.7032
chr5	122624206	122624296	protein_coding	Ppp1cc	utr3	ENSMUSG00000004455	ProperStrand	46	chr3	123210891	123210972	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	9	-22.9330
chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr7	117189863	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	5	-1.1963
chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	chr4	116827119	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-4.2855
chr16	86018292	86018382	LINE	L1Md_F2	L1	chr16L1Md_F286017589	NonProperStrand	1	chr1	46009940	46010030	LINE	L1Md_F2	L1	chr1L1Md_F246007449	NonProperStrand	1	1	-inf
chr13	55463482	55463566	protein_coding	Lman2	exon	ENSMUSG00000021484	ProperStrand	26	chr17	34727760	34727777	protein_coding	Gpsm3	exon	ENSMUSG00000034786	ProperStrand	12	1	-18.1869
chr2	130101996	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	chr7	116664794	116664921	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	25	-0.7564
chr7	17372194	17375148	protein_coding-noncoding	Slc1a5	utr5	ENSMUSG00000001918	ProperStrand	2	chr2	158205268	158205348	snoRNA	ENSMUSG00000064585_SNORA71	.	ENSMUSG00000064585	ProperStrand	418	1	-17.0107
chr2	60072582	60072635	protein_coding	March7	exon	ENSMUSG00000026977	ProperStrand	8	chr4	116826699	116826720	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-10.8996
chr14	37943930	37944792	protein_coding	Ghitm	exon	ENSMUSG00000041028	ProperStrand	26	chr17	13115748	13115786	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	1	-9.2159
chr14	57307335	57309749	protein_coding	Mphosph8	exon	ENSMUSG00000079184	ProperStrand	29	chr4	131908236	131908298	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	8	-21.6710
chr18	36828416	36828455	protein_coding	Sra1	exon	ENSMUSG00000006050	ProperStrand	5	chr8	113447141	113447169	protein_coding	St3gal2	intron	ENSMUSG00000031749	ProperStrand	206	1	-15.9866
chr7	16820195	16820212	protein_coding	Gpr77	utr3	ENSMUSG00000074361	ProperStrand	8	chr3	68889026	68889126	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-7.2271
chr13	23627660	23627723	protein_coding	Hist1h3g	exon	ENSMUSG00000062417	ProperStrand	25	chr4	131865399	131865499	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-5.6979
chr3	40572680	40572697	protein_coding	Hspa4l	exon	ENSMUSG00000025757	NonProperStrand	10	chr16	23111703	23111755	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.2069
chr2	160585565	160585726	protein_coding	Plcg1	exon	ENSMUSG00000016933	ProperStrand	65	chr6	85388876	85389659	protein_coding	Smyd5	exon	ENSMUSG00000033706	ProperStrand	107	1	-11.9909
chr11	70425198	70425751	protein_coding	Mink1	exon	ENSMUSG00000020827	ProperStrand	113	chr15	72927847	72927868	protein_coding	Chrac1	utr3	ENSMUSG00000068391	NonProperStrand	26	2	-inf
chr13	65946354	65946398	lincRNA	Gm7822	intron	ENSMUSG00000091975	NonProperStrand	1	chr14	75675518	75675535	protein_coding	Cpb2	intron	ENSMUSG00000021999	NonProperStrand	4	1	-inf
chr11	6171396	6171496	protein_coding	Tmed4	utr3	ENSMUSG00000004394	ProperStrand	10	chr14	52924694	52924772	protein_coding	Mettl3	utr5	ENSMUSG00000022160	ProperStrand	54	1	-17.2810
chr2	59623643	59623683	protein_coding	Tanc1	intron	ENSMUSG00000035168	ProperStrand	80	chr16	23111381	23111427	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.8895
chr12	93054332	93054711	protein_coding	Sel1l	exon	ENSMUSG00000020964	ProperStrand	27	chr9	120039564	120039654	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-4.8289
chr14	15572351	15572367	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr12	113969623	113969713	protein_coding	AW555464	intron	ENSMUSG00000072825	ProperStrand	96	2	-16.2451
chr9	109778875	109778891	protein_coding	Cdc25a	intron	ENSMUSG00000032477	ProperStrand	27	chr8	122087176	122087192	protein_coding	Hsdl1	utr3	ENSMUSG00000034189	NonProperStrand	3	1	-inf
chr1	155316048	155316064	protein_coding	Dhx9	exon	ENSMUSG00000042699	ProperStrand	98	chr4	131865463	131865492	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-3.0995
chr13	99634984	99637009	protein_coding	Tnpo1	exon	ENSMUSG00000009470	ProperStrand	56	chr4	131908704	131908797	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-3.9957
chr9	59518466	59526714	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr1	162968213	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	2	-2.4435
chr17	21102709	21102789	protein_coding	Ppp2r1a	utr3	ENSMUSG00000007564	ProperStrand	57	chr3	89009743	89009759	protein_coding	Gba	exon	ENSMUSG00000028048	NonProperStrand	88	1	-12.6464
chr4	40923758	40923838	protein_coding	Nfx1	exon	ENSMUSG00000028423	ProperStrand	39	chr1	89673639	89673729	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-4.0636
chr5	9416253	9416276	protein_coding	9330182L06Rik	intron	ENSMUSG00000056004	ProperStrand	2	chr18	35714172	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-10.7439
chr1	187157363	187157417	protein_coding	Bpnt1	intron	ENSMUSG00000026617	ProperStrand	15	chr4	131908689	131908718	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.5353
chr9	102884968	102885048	LTR	MTB_Mm	MaLR	chr9MTB_Mm102884707	ProperStrand	1	chr12	73464561	73464651	protein_coding	Rtn1	intron	ENSMUSG00000021087	NonProperStrand	10	1	-inf
chr7	3604858	3604898	protein_coding	Cnot3	exon	ENSMUSG00000035632	ProperStrand	55	chr5	73563222	73563238	protein_coding	Fryl	intron	ENSMUSG00000070733	ProperStrand	173	1	-11.3637
chr12	4433742	4433810	protein_coding	Ncoa1	intron	ENSMUSG00000020647	ProperStrand	38	chr17	35088957	35089017	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-6.7722
chr12	111749675	111819734	protein_coding	Ppp2r5c	utr3	ENSMUSG00000017843	ProperStrand	36	chr4	131865855	131865925	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-4.6017
chr10	14637010	14637090	LINE	L1Md_T	L1	chr10L1Md_T14636939	NonProperStrand	1	chr10	14637221	14637311	LINE	L1_Mus1	L1	chr10L1_Mus114637067	ProperStrand	1	1	-inf
chr15	81110991	81111009	SINE	ID4	ID	chr15ID481110956	ProperStrand	272	chr17	35088956	35089021	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-3.0116
chr5	121655101	121655147	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	chr9	40612077	40612148	snoRNA	ENSMUSG00000075924_Snord14d	.	ENSMUSG00000075924	ProperStrand	131	4	-8.5894
chr1	162966208	162966269	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	chr5	23358041	23358097	snoRNA	ENSMUSG00000093321_Snord93	.	ENSMUSG00000093321	ProperStrand	218	1	-5.0404
chr15	98762391	98762589	protein_coding	Tuba1b	exon	ENSMUSG00000023004	ProperStrand	32	chr18	35716685	35716883	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-8.2921
chr18	48225785	48225875	LTR	MTA_Mm-int	MaLR	chr18MTA_Mm-int48224731	ProperStrand	1	chrX	115576942	115577032	LTR	MTA_Mm-int	MaLR	chrXMTA_Mm-int115576668	ProperStrand	1	1	-inf
chr18	82670180	82691443	protein_coding	Mbp	exon	ENSMUSG00000041607	ProperStrand	11	chr15	102111207	102111252	protein_coding	Mfsd5	exon	ENSMUSG00000045665	ProperStrand	26	1	-18.3032
chr6	142299617	142299655	protein_coding	Pyroxd1	exon	ENSMUSG00000041671	ProperStrand	6	chr3	94167315	94167331	protein_coding	C2cd4d	utr5	ENSMUSG00000091648	ProperStrand	30	1	-18.9879
chr12	55835614	55835704	snRNA	ENSMUSG00000075960_U1	.	ENSMUSG00000075960	ProperStrand	210	chr15	79908931	79908956	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-3.1110
chr7	52713419	52714545	protein_coding	Ftl1	exon	ENSMUSG00000050708	ProperStrand	807	chr1	162967491	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	6	-2.5260
chr12	85350481	85350499	protein_coding	Acot1	utr5	ENSMUSG00000072949	ProperStrand	72	chr16	23111392	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	5	-6.3780
chr5	33591197	33591278	protein_coding	Ctbp1	exon	ENSMUSG00000037373	ProperStrand	17	chr7	52381972	52382010	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-9.2540
chr11	97034511	97034582	protein_coding	Kpnb1	exon	ENSMUSG00000001440	ProperStrand	197	chr9	120038497	120038538	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	5	-6.7887
chr15	25709455	25709475	protein_coding	Myo10	exon	ENSMUSG00000022272	ProperStrand	168	chr5	115560704	115560776	protein_coding	Acads	utr3	ENSMUSG00000029545	ProperStrand	3	1	-17.8539
chr3	52388277	52388294	SINE	B4A	B4	chr3B4A52388218	ProperStrand	169	chr11	118900007	118900024	protein_coding	Cbx8	exon	ENSMUSG00000025578	ProperStrand	95	1	-10.3123
chr8	64017614	64028377	protein_coding	Palld	exon	ENSMUSG00000058056	NonProperStrand	125	chr16	23110532	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.3142
chr9	119336756	119337108	protein_coding	Acvr2b	exon	ENSMUSG00000061393	ProperStrand	21	chr12	17552972	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-7.1708
chr7	20036905	20036921	protein_coding	Mark4	exon	ENSMUSG00000030397	NonProperStrand	45	chr16	23111778	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.3757
chr16	20684338	20684386	snoRNA	ENSMUSG00000077239_Snord66	.	ENSMUSG00000077239	ProperStrand	159	chr17	24857749	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	3	-2.8976
chr19	10688641	10688678	protein_coding	Ddb1	exon	ENSMUSG00000024740	ProperStrand	304	chr9	59159641	59159676	protein_coding	Adpgk	intron	ENSMUSG00000025236	ProperStrand	19	2	-18.8465
chr8	24169016	24169032	protein_coding	Ank1	utr5	ENSMUSG00000031543	ProperStrand	47	chr5	121655017	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-7.0491
chr1	153636008	153636030	protein_coding	Edem3	intron	ENSMUSG00000043019	ProperStrand	84	chr16	23110828	23110961	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-0.7886
chr14	123966417	123966438	protein_coding	Nalcn	intron	ENSMUSG00000000197	ProperStrand	7	chr10	23505254	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-5.0629
chr5	122887122	122887138	protein_coding	Anapc7	intron	ENSMUSG00000029466	ProperStrand	11	chr15	34370545	34370616	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-6.8789
chr11	63885336	63887052	protein_coding	Cox10	exon	ENSMUSG00000042148	NonProperStrand	187	chr10	87938132	87938149	protein_coding	Chpt1	utr3	ENSMUSG00000060002	ProperStrand	15	1	-13.8583
chr6	113364243	113364261	protein_coding	Ttll3	utr3	ENSMUSG00000030276	ProperStrand	17	chr4	131908732	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-5.7176
chr2	90235298	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	119136228	119136244	protein_coding	Gaa	exon	ENSMUSG00000025579	NonProperStrand	201	5	-10.7985
chr2	27374250	27374906	protein_coding	Wdr5	exon	ENSMUSG00000026917	ProperStrand	81	chr9	15119297	15119352	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-4.5307
chr14	76247064	76247150	protein_coding	Tpt1	exon	ENSMUSG00000060126	ProperStrand	236	chr11	51551325	51551415	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	3	-11.7629
chr3	156224612	156224628	lincRNA	4930570G19Rik	exon	ENSMUSG00000085084	ProperStrand	326	chr17	74888847	74888914	protein_coding	Yipf4	utr5	ENSMUSG00000024072	ProperStrand	5	1	-15.0976
chr2	119444142	119444205	protein_coding	Oip5	utr5	ENSMUSG00000072980	ProperStrand	3	chr19	8799847	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-11.2482
chr9	24549573	24549602	protein_coding	Tbx20	intron	ENSMUSG00000031965	NonProperStrand	110	chr19	8976766	8976828	protein_coding	Ganab	exon	ENSMUSG00000071650	ProperStrand	145	2	-16.2545
chr7	35996811	35996833	protein_coding	Lrp3	intron	ENSMUSG00000001802	ProperStrand	17	chr6	125136463	125136563	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	1	-8.9801
chr2	144098124	144098158	protein_coding	8430406I07Rik	exon	ENSMUSG00000027424	ProperStrand	43	chr18	33954826	33954881	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-4.1285
chr7	17040701	17040717	protein_coding	Tmem160	exon	ENSMUSG00000019158	ProperStrand	55	chr4	117941815	117941864	protein_coding	Ptprf	exon	ENSMUSG00000033295	ProperStrand	337	1	-10.0305
chr14	43300534	43300614	LINE	L1Md_F3	L1	chr14L1Md_F343300227	ProperStrand	1	chr2	150068097	150068187	LINE	L1Md_F3	L1	chr2L1Md_F3150067916	ProperStrand	40	1	-inf
chr16	15625732	15626152	protein_coding	Mcm4	exon	ENSMUSG00000022673	ProperStrand	51	chr11	6428043	6428150	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	10	-inf
chr4	116826699	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	chr17	13112511	13112586	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	6	-2.1988
chr6	63733131	63733153	protein_coding	Grid2	intron	ENSMUSG00000071424	NonProperStrand	76	chr16	23111753	23111822	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.5406
chr5	124838625	124842020	protein_coding	Sbno1	exon	ENSMUSG00000038095	ProperStrand	134	chr5	34234244	34234262	protein_coding	Whsc1	utr5	ENSMUSG00000057406	ProperStrand	409	7	-inf
chr9	108506364	108506391	protein_coding	Arih2	utr3	ENSMUSG00000064145	ProperStrand	9	chr4	131865932	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.2544
chr12	60774058	60774112	snoRNA	ENSMUSG00000077603_SNORA3	.	ENSMUSG00000077603	ProperStrand	185	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-3.0863
chr19	24548058	24548077	protein_coding	Pip5k1b	intron	ENSMUSG00000024867	ProperStrand	7	chr19	4194536	4194595	protein_coding	Ppp1ca	exon	ENSMUSG00000040385	ProperStrand	40	1	-18.3383
chr7	30008860	30008898	protein_coding	Kcnk6	utr3	ENSMUSG00000046410	ProperStrand	3	chr4	131908809	131908870	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-6.9471
chr1	121368189	121368279	protein_coding	Ralb	utr3	ENSMUSG00000004451	ProperStrand	17	chr4	131865394	131865474	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-6.4708
chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr17	26360446	26360526	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	6	-6.4915
chr1	162965572	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr9	15120968	15121033	snoRNA	ENSMUSG00000065265_SNORA32	.	ENSMUSG00000065265	ProperStrand	101	1	-2.3625
chr13	29895016	29895032	protein_coding	Cdkal1	utr3	ENSMUSG00000006191	ProperStrand	43	chr15	5068427	5068479	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	2	-10.8660
chr5	108334231	108334331	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	chr13	21259940	21259978	tRNA	tRNA1000-LysTTT	.	8053	ProperStrand	86	3	-10.0039
chr12	68768934	68769024	LINE	L1Md_F2	L1	chr12L1Md_F268768613	NonProperStrand	12	chr3	140047861	140047951	LINE	L1Md_F2	L1	chr3L1Md_F2140047567	NonProperStrand	1	1	-inf
chr14	99090051	99090071	SINE	ID_B1	B4	chr14ID_B199089986	ProperStrand	12	chr9	15119714	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.6882
chr9	79935177	79935232	protein_coding	Senp6	intron	ENSMUSG00000034252	ProperStrand	110	chr14	56159294	56159312	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	4	-inf
chr11	60513287	60513372	protein_coding	Llgl1	utr5	ENSMUSG00000020536	ProperStrand	20	chr19	8800375	8800465	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-5.6450
chr2	4912026	4912130	protein_coding	Mcm10	utr3	ENSMUSG00000026669	ProperStrand	21	chr12	112779258	112779277	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-6.8487
chr14	58168467	58168496	protein_coding	N6amt2	utr3	ENSMUSG00000021951	ProperStrand	2	chr16	23111466	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-inf
chr11	120812080	120812170	protein_coding	Slc16a3	utr5	ENSMUSG00000025161	ProperStrand	98	chr4	116883449	116883529	snRNA	ENSMUSG00000070237_U5	.	ENSMUSG00000070237	ProperStrand	154	1	-10.4360
chr19	8798398	8798478	lincRNA	Snhg1	exon	ENSMUSG00000090867	ProperStrand	100	chr10	23505152	23505242	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	6	-6.1187
chr5	100855902	100855940	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr18	42035422	42035439	protein_coding	Prelid2	utr3	ENSMUSG00000056671	ProperStrand	4	1	-12.2924
chr10	57231947	57232047	protein_coding	Hsf2	utr3	ENSMUSG00000019878	ProperStrand	40	chr18	35716811	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.8651
chr12	31951559	31951611	protein_coding	Lamb1	exon	ENSMUSG00000002900	ProperStrand	87	chr6	29119929	29119945	protein_coding	Prrt4	exon	ENSMUSG00000079654	NonProperStrand	18	1	-14.9999
chr10	79605284	79605347	protein_coding	Atp5d	exon	ENSMUSG00000003072	ProperStrand	44	chr4	116826698	116826766	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-7.3993
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr16	56035865	56035931	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	1	-4.3150
chr11	69218090	69218132	protein_coding	Kdm6b	exon	ENSMUSG00000018476	ProperStrand	76	chr4	143027927	143028559	protein_coding	Oog4	exon	ENSMUSG00000047799	NonProperStrand	99	1	-11.8323
chr4	57969085	57969155	protein_coding	Txn1	utr5	ENSMUSG00000028367	ProperStrand	31	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0062
chr1	34285316	34285406	protein_coding	Dst	exon	ENSMUSG00000026131	ProperStrand	461	chr3	30799979	30800008	protein_coding	Phc3	utr3	ENSMUSG00000037652	ProperStrand	32	10	-21.0532
chr17	38290745	38290764	LTR	MurERV4-int	ERVK	chr17MurERV4-int38290059	ProperStrand	21	chr4	147385125	147385141	protein_coding	Clcn6	exon	ENSMUSG00000029016	ProperStrand	120	1	-14.0511
chr11	3649570	3649587	protein_coding	Osbp2	intron	ENSMUSG00000020435	ProperStrand	60	chr11	102297220	102297391	protein_coding	Grn	exon	ENSMUSG00000034708	ProperStrand	43	1	-13.9882
chr6	97122776	97122792	protein_coding	Tmf1	intron	ENSMUSG00000030059	ProperStrand	33	chr8	32260335	32260423	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-5.7957
chrX	10296349	10296366	protein_coding	Mid1ip1	utr3	ENSMUSG00000008035	ProperStrand	27	chr11	74479756	74479786	protein_coding	1300001I01Rik	exon	ENSMUSG00000020741	ProperStrand	76	1	-14.4555
chr11	72259144	72259234	protein_coding	Mybbp1a	exon	ENSMUSG00000040463	ProperStrand	279	chr3	108357410	108357490	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-1.8161
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	122160286	122160362	SINE	RSINE1	B4	chr5RSINE1122160270	ProperStrand	2	1	-11.8388
chr4	131908356	131908465	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr1	102076756	102076790	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	1	-3.5218
chr14	55236579	55236597	protein_coding	Psmb5	intron	ENSMUSG00000022193	ProperStrand	14	chr19	23332023	23332040	protein_coding	Smc5	exon	ENSMUSG00000024943	ProperStrand	146	1	-14.4971
chr12	70044284	70044374	LINE	Lx	L1	chr12Lx70040660	NonProperStrand	1	chr7	54442876	54442966	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	1	-inf
chr7	19800699	19800717	protein_coding	Gpr4	intron	ENSMUSG00000044317	ProperStrand	4	chr11	106362569	106362626	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-13.0688
chr8	72432985	72433039	protein_coding	Gatad2a	utr3	ENSMUSG00000036180	ProperStrand	112	chr9	66308275	66309542	protein_coding	Herc1	exon	ENSMUSG00000038664	ProperStrand	81	1	-11.4563
chr5	142285868	142285884	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	chr11	48615536	48615609	snoRNA	ENSMUSG00000064725_Snord96a	.	ENSMUSG00000064725	ProperStrand	89	1	-9.8270
chr18	78021199	78021274	protein_coding	Atp5a1	utr3	ENSMUSG00000025428	ProperStrand	254	chr12	17553011	17553079	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-2.4346
chr11	28789036	28789054	protein_coding	Efemp1	intron	ENSMUSG00000020467	NonProperStrand	5	chr8	74136924	74141498	protein_coding	Glt25d1	exon	ENSMUSG00000034807	ProperStrand	36	1	-18.5702
chr16	17469377	17469395	protein_coding	Crkl	exon	ENSMUSG00000006134	ProperStrand	43	chr11	97642951	97643075	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.0564
chr6	147445228	147445245	protein_coding	Ccdc91	intron	ENSMUSG00000030301	ProperStrand	15	chr3	108357462	108357494	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-7.2879
chr17	46814084	46814100	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr2	152714998	152716233	protein_coding	Tpx2	exon	ENSMUSG00000027469	ProperStrand	111	1	-8.0005
chrX	70237450	70237471	miRNA	Mir2137	.	ENSMUSG00000089357	ProperStrand	50	chr18	35716697	35716787	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.4759
chr18	35312285	35312354	protein_coding	Ctnna1	exon	ENSMUSG00000037815	ProperStrand	115	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	2	-10.4251
chr11	69266813	69267278	protein_coding	Dnahc2	exon	ENSMUSG00000005237	ProperStrand	95	chr3	108357255	108357390	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-3.6740
chr3	68889134	68889224	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	chr5	23358027	23358098	snoRNA	ENSMUSG00000093321_Snord93	.	ENSMUSG00000093321	ProperStrand	218	1	-1.1739
chr8	122752488	124654080	protein_coding	Gm20388	intron	ENSMUSG00000092329	NonProperStrand	203	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-0.7733
chr11	119684319	119704996	antisense	A430071A18Rik	.	ENSMUSG00000085081	ProperStrand	8	chr9	15118322	15118373	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-7.4559
chr11	6520342	6520422	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	chr11	116938661	116938751	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-1.1978
chr4	132049441	132049531	protein_coding	Sesn2	utr3	ENSMUSG00000028893	ProperStrand	75	chr4	131908356	131908436	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-2.1737
chr8	114822612	114822702	SINE	B3	B2	chr8B3114822556	NonProperStrand	1	chr2	149704569	149704649	protein_coding	Tmem90b	intron	ENSMUSG00000074736	ProperStrand	5	1	-inf
chr17	86009121	86009137	lincRNA	Six3os1	intron	ENSMUSG00000093460	NonProperStrand	3	chr4	131865923	131865979	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.6896
chr17	66468411	66468427	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	chr11	6519820	6519905	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	2	-7.5605
chr19	6324795	6324835	protein_coding	Cdc42bpg	utr3	ENSMUSG00000024769	ProperStrand	90	chr15	87414895	87414913	protein_coding	Fam19a5	intron	ENSMUSG00000054863	NonProperStrand	1	1	-inf
chr2	29926015	29926058	protein_coding	Set	exon	ENSMUSG00000054766	ProperStrand	167	chr19	8799855	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	3	-7.7043
chr19	47182234	47182988	protein_coding	Pdcd11	exon	ENSMUSG00000025047	ProperStrand	137	chr10	127496322	127505797	protein_coding	Ptges3	exon	ENSMUSG00000071072	ProperStrand	89	1	-10.8636
chr9	25059948	25059964	protein_coding	Sept7	intron	ENSMUSG00000001833	ProperStrand	101	chr2	26494708	26494808	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.2060
chr4	155265339	155265509	protein_coding	Pusl1	exon	ENSMUSG00000051557	ProperStrand	4	chr17	13112525	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	2	-16.5315
chr2	121248194	121248239	protein_coding	Pdia3	exon	ENSMUSG00000027248	ProperStrand	74	chr5	118376503	118376519	protein_coding	Nos1	exon	ENSMUSG00000029361	NonProperStrand	237	1	-10.1375
chr2	90235299	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	42298355	42298372	protein_coding	Nr2e1	intron	ENSMUSG00000019803	ProperStrand	32	1	-5.6851
chr15	82683206	82725637	protein_coding	Tcf20	exon	ENSMUSG00000041852	ProperStrand	658	chr8	73419657	73419776	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	4	-1.2046
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr5	108336359	108336495	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	7	-1.7573
chr9	19461991	19462037	LINE	L1Md_A	L1	chr9L1Md_A19461964	ProperStrand	81	chr3	95734428	95734458	protein_coding	Anp32e	intron	ENSMUSG00000015749	ProperStrand	25	1	-14.4804
chr18	32056357	32056447	protein_coding	Wdr33	exon	ENSMUSG00000024400	ProperStrand	48	chr7	116663632	116663714	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	4	-10.1574
chr4	116826560	116826971	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	chr1	9932550	9932623	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-4.8357
chr11	116710590	116710631	protein_coding	1110005A03Rik	intron	ENSMUSG00000090266	ProperStrand	8	chr5	121655016	121655106	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	7	-19.9179
chr5	3646844	3646860	protein_coding	Gatad1	exon	ENSMUSG00000007415	ProperStrand	7	chr16	23111373	23111447	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-12.6567
chr2	179937133	179941450	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr12	17552958	17553008	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-1.8442
chr11	75578202	75578264	protein_coding	Ywhae	utr3	ENSMUSG00000020849	ProperStrand	176	chr2	26768393	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-3.5515
chr1	180820386	180820402	protein_coding	Kif26b	intron	ENSMUSG00000026494	ProperStrand	9	chr4	131865855	131865900	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.2544
chr11	62416575	62416609	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr8	32260335	32260432	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	6	-7.8792
chr2	27954905	27954923	lincRNA	F730016J06Rik	intron	ENSMUSG00000086425	NonProperStrand	21	chr9	44143428	44143481	protein_coding	H2afx	utr3	ENSMUSG00000049932	ProperStrand	137	1	-13.7850
chr15	82725599	82725637	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	chr7	116663665	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	5	-0.8807
chr1	164648896	164648986	protein_coding	Prrc2c	exon	ENSMUSG00000040225	ProperStrand	413	chr5	108336376	108336459	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-1.4943
chr13	23653860	23653963	protein_coding	Hist1h3e	exon	ENSMUSG00000069273	ProperStrand	30	chr11	77995188	77995210	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-7.5641
chr9	27140108	27140721	protein_coding	Igsf9b	exon	ENSMUSG00000034275	ProperStrand	18	chr13	100181906	100181923	protein_coding	Mrps27	intron	ENSMUSG00000041632	ProperStrand	21	1	-17.8066
chr13	49779737	49779827	protein_coding	Iars	intron	ENSMUSG00000037851	ProperStrand	95	chr13	49779690	49779770	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-6.1050
chr11	88388976	88389045	protein_coding	Msi2	intron	ENSMUSG00000069769	ProperStrand	159	chr3	123210895	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-1.4926
chr17	4082407	4082507	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr1	93342189	93345290	protein_coding	Per2	exon	ENSMUSG00000055866	ProperStrand	114	1	-8.6794
chr8	125923741	125923824	protein_coding	Tcf25	intron	ENSMUSG00000001472	ProperStrand	66	chr17	24857806	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	3	-5.8261
chr5	45916617	45916717	protein_coding	Med28	utr3	ENSMUSG00000015804	ProperStrand	50	chr16	23110902	23110960	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-4.1222
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	1	-5.2115
chr6	35462215	35462248	protein_coding	Mtpn	utr3	ENSMUSG00000029840	ProperStrand	18	chr6	95077607	95077623	protein_coding	Kbtbd8	utr3	ENSMUSG00000030031	ProperStrand	26	1	-17.2234
chr10	128062313	128062355	protein_coding	Rps26	exon	ENSMUSG00000025362	ProperStrand	67	chr2	166890502	166890577	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	3	-16.4741
chr19	10289408	10289577	protein_coding	Gm98	exon	ENSMUSG00000036098	ProperStrand	26	chr2	26493366	26493456	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-5.3491
chr11	99283266	99283282	protein_coding	Krt12	exon	ENSMUSG00000020912	ProperStrand	10	chr2	26494774	26494827	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-6.5951
chr15	65689130	65689146	protein_coding	Efr3a	exon	ENSMUSG00000015002	NonProperStrand	3	chr15	79908959	79909019	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-11.7928
chr3	75452907	75459383	LTR	ETnERV2-int	ERVK	chr3ETnERV2-int75454643	ProperStrand	1	chr4	131908252	131908342	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-inf
chr13	6557057	6559854	protein_coding	Pitrm1	exon	ENSMUSG00000021193	ProperStrand	28	chr16	23111373	23111464	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-4.3609
chr9	100966289	100966307	SINE	B4A	B4	chr9B4A100966214	ProperStrand	51	chr7	52704915	52704948	protein_coding	Gys1	intron	ENSMUSG00000003865	ProperStrand	28	1	-15.1735
chr2	122266070	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr5	33703112	33705351	protein_coding	Maea	exon	ENSMUSG00000079562	ProperStrand	32	1	-10.1713
chr9	44627884	44627921	protein_coding	Mll1	exon	ENSMUSG00000002028	ProperStrand	151	chr3	89219421	89219467	protein_coding	Cks1b	utr3	ENSMUSG00000028044	ProperStrand	10	3	-20.7005
chr16	27446669	27446685	protein_coding	Ccdc50	utr3	ENSMUSG00000038127	ProperStrand	10	chr16	23111756	23111811	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.2069
chr11	113523309	113523337	protein_coding	D11Wsu99e	utr3	ENSMUSG00000041629	ProperStrand	28	chr17	24857811	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.6557
chr16	23109209	23111837	protein_coding	Eif4a2	intron	ENSMUSG00000022884	ProperStrand	356	chr16	23111373	23111466	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	7	-1.2380
chr15	60661082	60661099	lincRNA	9930014A18Rik	exon	ENSMUSG00000044513	ProperStrand	54	chr9	15118327	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	3	-9.0587
chr6	135185742	135185817	protein_coding	8430419L09Rik	utr3	ENSMUSG00000030207	ProperStrand	14	chr4	131908718	131908808	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.6665
chr5	144268295	144268984	protein_coding	Rac1	exon	ENSMUSG00000001847	ProperStrand	32	chr9	78326457	78326547	protein_coding	Eef1a1	utr3	ENSMUSG00000037742	ProperStrand	1990	1	-7.5874
chr14	61984355	61984371	protein_coding	Kpna3	utr3	ENSMUSG00000021929	NonProperStrand	6	chr11	106362639	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-12.1528
chr16	17210492	17210512	protein_coding	Rimbp3	exon	ENSMUSG00000071636	ProperStrand	67	chr4	131865855	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.5997
chr6	83111671	83111687	protein_coding	1700003E16Rik	exon	ENSMUSG00000030030	ProperStrand	352	chr3	108357360	108357420	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-1.4673
chr11	114764831	114764849	protein_coding	Cd300a	utr3	ENSMUSG00000034652	ProperStrand	7	chr3	68889027	68889127	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-7.5114
chr19	46109118	46109974	protein_coding	Ldb1	exon	ENSMUSG00000025223	ProperStrand	42	chr18	35716831	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-4.8567
chr15	81110991	81111009	SINE	ID4	ID	chr15ID481110956	ProperStrand	272	chr2	37655529	37655563	protein_coding	Dennd1a	utr3	ENSMUSG00000035392	ProperStrand	24	1	-12.1383
chr14	21841314	21843346	protein_coding	Vcl	utr5	ENSMUSG00000021823	ProperStrand	48	chr10	6063958	6063976	protein_coding	Akap12	intron	ENSMUSG00000038587	ProperStrand	1008	2	-12.9614
chr16	23110456	23110536	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	NonProperStrand	16	chr17	13112486	13112576	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	NonProperStrand	11	1	-18.9924
chr4	98587616	98587632	SINE	RSINE1	B4	chr4RSINE198587581	NonProperStrand	4	chr16	50193246	50193272	protein_coding	Bbx	utr3	ENSMUSG00000022641	ProperStrand	18	1	-19.3636
chr13	64467866	64467931	protein_coding	Ctsl	exon	ENSMUSG00000021477	ProperStrand	44	chr17	39985569	39985669	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-6.5453
chr13	64277318	64277350	protein_coding	Habp4	exon	ENSMUSG00000021476	ProperStrand	2	chr4	131908689	131908797	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-8.0336
chr8	126829606	126829623	antisense	1810008B01Rik	.	ENSMUSG00000089745	ProperStrand	10	chr9	78327915	78328063	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-9.9725
chr11	119927332	119927349	protein_coding	Azi1	exon	ENSMUSG00000039781	ProperStrand	24	chr15	79913287	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-5.3491
chr4	129526967	129526988	protein_coding	Ptp4a2	utr3	ENSMUSG00000028788	ProperStrand	27	chr7	116664807	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	7	-inf
chr15	59166671	59166761	protein_coding	E430025E21Rik	exon	ENSMUSG00000022350	ProperStrand	18	chr2	26494744	26494824	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.4011
chr4	43505803	43505883	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr11	106113816	106113994	protein_coding	Ftsj3	exon	ENSMUSG00000020706	ProperStrand	64	1	-2.9550
chr10	76521486	76541061	protein_coding	Col18a1	exon	ENSMUSG00000001435	ProperStrand	287	chr7	116664813	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-1.7060
chr5	33972106	33972206	protein_coding	Fam53a	utr5	ENSMUSG00000037339	ProperStrand	18	chr16	23111440	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.2408
chr10	79880095	79880170	protein_coding	Tcf3	exon	ENSMUSG00000020167	ProperStrand	73	chr4	131908701	131908791	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.9692
chr9	78023110	78023148	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr2	24806849	24806886	protein_coding	Zmynd19	intron	ENSMUSG00000026974	ProperStrand	18	1	-8.2901
chr13	100878425	100878443	protein_coding	Serf1	utr5	ENSMUSG00000021643	ProperStrand	1	chr18	73693166	73693190	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-inf
chr6	125064325	125064425	protein_coding	Chd4	exon	ENSMUSG00000063870	ProperStrand	303	chr9	15118332	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-0.9043
chrX	152009278	152009294	protein_coding	Ptchd1	exon	ENSMUSG00000041552	NonProperStrand	294	chr3	85942736	85942780	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	1	-6.5551
chrX	99380370	99381766	protein_coding	Rps4x	exon	ENSMUSG00000031320	ProperStrand	139	chr4	131865383	131865503	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	14	-20.0405
chr4	43505657	43505721	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr2	121126972	121127007	protein_coding	Mtap1a	exon	ENSMUSG00000027254	ProperStrand	17	2	-9.0344
chr16	56035895	56035975	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	chr2	144087332	144087422	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-2.4478
chr1	63103852	63103918	protein_coding	Ino80d	utr3	ENSMUSG00000040865	ProperStrand	70	chr3	108357258	108357348	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-4.2463
chr4	86500735	86500794	protein_coding	Rps6	exon	ENSMUSG00000028495	ProperStrand	263	chr1	180885279	180885295	protein_coding	Smyd3	utr3	ENSMUSG00000055067	NonProperStrand	190	1	-8.0455
chr13	38016984	38017005	protein_coding	Rreb1	intron	ENSMUSG00000039087	ProperStrand	33	chr11	69482453	69482497	snoRNA	ENSMUSG00000089542_snoU6-77	.	ENSMUSG00000089542	ProperStrand	138	1	-12.8500
chr6	91938204	91938294	protein_coding	Fgd5	exon	ENSMUSG00000034037	ProperStrand	38	chr7	117166761	117166841	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-5.7069
chr15	81514290	81514322	protein_coding	L3mbtl2	exon	ENSMUSG00000022394	ProperStrand	19	chr4	56819129	56819147	protein_coding	BC026590	utr3	ENSMUSG00000038827	NonProperStrand	50	1	-16.0047
chr16	43580479	43580555	protein_coding	Zbtb20	intron	ENSMUSG00000022708	ProperStrand	28	chr16	23110967	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.2442
chr8	63792873	63792899	protein_coding	Sh3rf1	intron	ENSMUSG00000031642	ProperStrand	50	chr7	29136541	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.6778
chr5	136266609	136266664	SINE	PB1D10	Alu	chr5PB1D10136266524	ProperStrand	3	chr16	23110831	23110875	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-inf
chr2	26493413	26493513	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr11	116533862	116533890	snoRNA	ENSMUSG00000065640_Snord1c	.	ENSMUSG00000065640	ProperStrand	373	2	-4.7833
chr4	55431651	55431671	lincRNA	Gm12505	exon	ENSMUSG00000087070	ProperStrand	447	chr8	113577191	113577822	protein_coding	Aars	exon	ENSMUSG00000031960	ProperStrand	355	1	-5.7673
chr9	72595012	72595100	protein_coding	Nedd4	utr3	ENSMUSG00000032216	ProperStrand	308	chr12	88778631	88778715	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-3.3657
chr4	131866614	131866673	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	chr17	35087895	35087964	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	3	-4.3238
chr4	131399490	131399506	protein_coding	Mecr	exon	ENSMUSG00000028910	NonProperStrand	109	chr5	74489566	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-2.6996
chr7	117166722	117166822	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	chr11	98878375	98878402	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	5	-1.1812
chr4	41469131	41469231	protein_coding	2310028H24Rik	intron	ENSMUSG00000028439	ProperStrand	17	chr7	117189867	117189943	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	16	-inf
chr4	141181949	141181975	protein_coding	Plekhm2	utr3	ENSMUSG00000028917	ProperStrand	8	chr16	23110913	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-8.6552
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr8	125731536	125731552	protein_coding	Gm20388	intron	ENSMUSG00000092329	ProperStrand	295	2	-8.9031
chr11	59661803	59661819	protein_coding	Nt5m	exon	ENSMUSG00000032615	ProperStrand	17	chr1	162966189	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-10.1266
chr12	114290175	114290191	protein_coding	Pacs2	intron	ENSMUSG00000021143	NonProperStrand	302	chr9	120039623	120039662	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-0.8134
chr18	12172461	12172477	protein_coding	6030446N20Rik	intron	ENSMUSG00000049411	ProperStrand	235	chr5	108334195	108334240	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-2.3298
chr4	43505737	43505837	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr10	57236397	57236418	protein_coding	Serinc1	utr3	ENSMUSG00000019877	ProperStrand	22	1	-4.9644
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr8	74058628	74058668	protein_coding	Bst2	exon	ENSMUSG00000046718	ProperStrand	15	1	-9.7267
chr18	74090476	74090492	protein_coding	Mapk4	exon	ENSMUSG00000024558	ProperStrand	34	chr4	131908241	131908298	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.3115
chr7	149170855	149171339	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	chr7	116664793	116664870	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-0.9918
chr17	23743542	23743632	protein_coding	Zscan10	intron	ENSMUSG00000023902	ProperStrand	9	chr10	23505157	23505237	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.5477
chr17	47928467	47928485	protein_coding	Tfeb	exon	ENSMUSG00000023990	ProperStrand	78	chr17	35299546	35299639	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-4.2756
chr1	182261853	182261869	protein_coding	Itpkb	intron	ENSMUSG00000038855	NonProperStrand	27	chr4	116826738	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-8.3816
chr11	23156382	23156441	protein_coding	Xpo1	utr5	ENSMUSG00000020290	ProperStrand	123	chr5	149113021	149113038	protein_coding	Mtus2	exon	ENSMUSG00000029651	ProperStrand	114	1	-10.5830
chr1	152279613	152279639	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	chr9	57385425	57385441	protein_coding	2310046O06Rik	utr5	ENSMUSG00000032305	ProperStrand	135	1	-7.2908
chr8	87366056	87366146	protein_coding	Calr	utr3	ENSMUSG00000003814	ProperStrand	232	chr10	110918549	110918629	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-1.2323
chr17	34324656	34324673	protein_coding	Psmb9	utr5	ENSMUSG00000024337	ProperStrand	60	chr9	15119631	15119693	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.6296
chr8	28263100	28263117	protein_coding	Rab11fip1	exon	ENSMUSG00000031488	NonProperStrand	9	chr11	6428060	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-6.9084
chr5	135016842	135016858	protein_coding	Clip2	intron	ENSMUSG00000063146	ProperStrand	35	chr10	23505261	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.0450
chr14	20884200	20884218	Simple_repeat	(TTAGGG)n	Simple_repeat	chr14(TTAGGG)n20883888	NonProperStrand	4	chr5	74489614	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	2	-15.2749
chr3	96218359	96218437	misc_RNA	Telomerase-vert	.	ENSMUSG00000064796	ProperStrand	443	chr7	118219704	118219740	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-0.9040
chr11	51464192	51464208	protein_coding	N4bp3	utr5	ENSMUSG00000001053	NonProperStrand	41	chr17	35972386	35972486	protein_coding	Tubb5	exon	ENSMUSG00000001525	ProperStrand	624	1	-9.3932
chr1	92689614	92689630	protein_coding	Col6a3	exon	ENSMUSG00000048126	ProperStrand	79	chr5	31825422	31825452	protein_coding	Supt7l	utr5	ENSMUSG00000053134	ProperStrand	7	1	-17.2423
chrX	128094556	128094576	SINE	B1_Mus1	Alu	chrXB1_Mus1128094517	ProperStrand	4	chr4	131908357	131908416	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-11.0940
chr15	12763980	12764070	protein_coding	Drosha	exon	ENSMUSG00000022191	ProperStrand	163	chr7	116664819	116664899	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.0296
chr6	38453771	38453787	protein_coding	Ubn2	utr3	ENSMUSG00000038538	ProperStrand	86	chr3	123210891	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-2.8264
chr4	32732475	32732505	protein_coding	Casp8ap2	exon	ENSMUSG00000028282	ProperStrand	7	chr3	153574604	153574654	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	1	-14.0991
chr17	13112511	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	NonProperStrand	11	chr10	23505560	23505627	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	NonProperStrand	2	2	-inf
chr6	87769189	87769558	protein_coding	Isy1	exon	ENSMUSG00000030056	ProperStrand	172	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-3.8460
chr14	99467517	99467564	protein_coding	6720463M24Rik	exon	ENSMUSG00000022070	ProperStrand	23	chr13	54723202	54723218	protein_coding	Faf2	exon	ENSMUSG00000025873	ProperStrand	90	1	-14.4338
chr3	136856024	136856041	LINE	L1_Mus4	L1	chr3L1_Mus4136855983	ProperStrand	8	chr12	17552963	17553008	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-9.1689
chr2	145076803	145209255	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	chr19	8963019	8963186	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	12	-2.1520
chr17	25961248	25961338	protein_coding	Wdr24	exon	ENSMUSG00000025737	ProperStrand	5	chr11	69481386	69481466	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-8.1843
chr1	157626498	157626588	protein_coding	Qsox1	exon	ENSMUSG00000033684	ProperStrand	11	chr4	131908717	131908797	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.1344
chr9	44196258	44196389	protein_coding	Hyou1	exon	ENSMUSG00000032115	ProperStrand	145	chr4	131908236	131908355	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-1.6410
chr11	59025865	59025945	protein_coding	Arf1	utr3	ENSMUSG00000048076	ProperStrand	52	chr5	130300457	130300547	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-7.1705
chr2	90235298	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	82679326	82679342	protein_coding	Col4a3	exon	ENSMUSG00000079465	ProperStrand	99	2	-5.9867
chr2	158185537	158185655	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr9	15119646	15119752	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	14	-0.9712
chr2	155068536	155073590	protein_coding	Dynlrb1	exon	ENSMUSG00000047459	ProperStrand	4	chr11	97641455	97641535	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	1	-13.5233
chr5	135864550	135867544	protein_coding	Pom121	exon	ENSMUSG00000053293	ProperStrand	127	chr5	130295414	130295490	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-3.8184
chr15	81547063	81549194	protein_coding	Rangap1	exon	ENSMUSG00000022391	ProperStrand	69	chr3	123210897	123210978	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-3.3699
chr6	67227763	67227792	protein_coding	Serbp1	exon	ENSMUSG00000036371	ProperStrand	261	chr5	102281575	102281665	protein_coding	Wdfy3	utr3	ENSMUSG00000043940	ProperStrand	45	16	-21.2190
chr15	99072693	99072793	protein_coding	Kcnh3	exon	ENSMUSG00000037579	ProperStrand	24	chr7	29136595	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.0229
chr1	63360613	63360631	protein_coding	Zdbf2	utr3	ENSMUSG00000027520	NonProperStrand	20	chr5	121655030	121655099	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.8755
chr17	32475308	32475350	protein_coding	Akap8l	exon	ENSMUSG00000002625	ProperStrand	10	chr13	103895241	103895257	protein_coding	Mast4	intron	ENSMUSG00000034751	ProperStrand	150	1	-15.1439
chr11	87240291	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	chr18	35714166	35714264	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	3	-4.3739
chr11	7067186	7069426	protein_coding	Adcy1	exon	ENSMUSG00000020431	ProperStrand	183	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-1.6423
chr12	109460710	109460726	protein_coding	Ccdc85c	intron	ENSMUSG00000084883	ProperStrand	157	chr2	130103751	130103811	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-6.5596
chr8	100770085	100770106	LINE	Lx7	L1	chr8Lx7100769969	ProperStrand	1	chr13	90238585	90238610	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	1	-inf
chr11	3673381	3673471	protein_coding	Osbp2	intron	ENSMUSG00000020435	ProperStrand	60	chr10	116714618	116714708	protein_coding	Lyz2	utr3	ENSMUSG00000069516	ProperStrand	4	1	-19.2310
chr5	77711582	77711672	protein_coding	Rest	exon	ENSMUSG00000029249	ProperStrand	136	chr3	34549758	34549838	protein_coding	Sox2	exon	ENSMUSG00000074637	ProperStrand	299	1	-8.4562
chr4	86500848	86502222	protein_coding	Rps6	exon	ENSMUSG00000028495	ProperStrand	263	chr11	6428035	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	5	-5.7678
chr6	56673908	56673978	protein_coding	Avl9	intron	ENSMUSG00000029787	ProperStrand	21	chr8	129468763	129468863	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-6.4742
chr8	98232527	98232709	protein_coding	Ndrg4	exon	ENSMUSG00000036564	ProperStrand	22	chr9	15119968	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-9.2732
chr10	75322440	75322566	protein_coding	Mif	exon	ENSMUSG00000033307	ProperStrand	146	chr4	143486645	143486661	protein_coding	Pramef6	exon	ENSMUSG00000078512	ProperStrand	21	7	-20.2031
chr11	116714089	116714105	protein_coding-noncoding	Mfsd11	utr5	ENSMUSG00000020818	ProperStrand	3	chr3	16104095	16104133	protein_coding	Ythdf3	exon	ENSMUSG00000047213	ProperStrand	22	3	-inf
chr3	153575089	153575117	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	chr9	120038468	120038628	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	5	-1.6330
chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	chr5	115940323	115940406	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	4	-17.8099
chr11	79064637	79067893	protein_coding	Wsb1	exon	ENSMUSG00000017677	ProperStrand	12	chr2	26493366	26493388	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-6.9066
chr13	62944660	62944677	protein_coding	Fbp2	intron	ENSMUSG00000021456	ProperStrand	100	chr18	35716809	35716847	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.3821
chr3	108357255	108357328	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	chr4	41158546	41158608	snoRNA	ENSMUSG00000089308_SNORD121A	.	ENSMUSG00000089308	ProperStrand	209	1	-2.2811
chr4	137352181	137352235	protein_coding	Alpl	utr5	ENSMUSG00000028766	ProperStrand	80	chr13	49017127	49017185	protein_coding	Fam120a	exon	ENSMUSG00000038014	ProperStrand	76	2	-19.0783
chr14	121346083	121346167	protein_coding	Ipo5	utr3	ENSMUSG00000030662	ProperStrand	135	chr5	147646429	147646463	snoRNA	ENSMUSG00000077185_SNORD102	.	ENSMUSG00000077185	ProperStrand	142	8	-21.1999
chr1	145506238	145506255	protein_coding	Cdc73	intron	ENSMUSG00000026361	NonProperStrand	26	chr12	106269400	106269450	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-5.7637
chr2	90235291	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chrX	96262290	96262932	protein_coding	Stard8	exon	ENSMUSG00000031216	ProperStrand	142	1	-2.8737
chr5	136333035	136333052	protein_coding	Srrm3	utr3	ENSMUSG00000039860	ProperStrand	41	chr9	120037905	120037995	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	6	-19.5647
chr11	64949314	64949335	protein_coding	Arhgap44	intron	ENSMUSG00000033389	NonProperStrand	30	chr5	108334195	108334240	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-6.1791
chr10	6063959	6063977	protein_coding	Akap12	intron	ENSMUSG00000038587	ProperStrand	1008	chr17	35299571	35299642	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	2	-0.9080
chr10	79244234	79244255	protein_coding	Prss57	utr3	ENSMUSG00000020323	ProperStrand	13	chr7	104548798	104548856	protein_coding	Ndufc2	exon	ENSMUSG00000030647	ProperStrand	10	1	-21.7531
chr15	36794557	36794574	LINE	L1MB5	L1	chr15L1MB536794504	ProperStrand	11	chr1	162965980	162965999	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-6.9371
chr6	22372899	22372989	LTR	ORR1B2-int	MaLR	chr6ORR1B2-int22372549	NonProperStrand	1	chr6	22373203	22373283	SINE	B1_Mus1	Alu	chr6B1_Mus122373157	NonProperStrand	1	1	-inf
chr2	164670145	164670225	protein_coding	Pltp	exon	ENSMUSG00000017754	ProperStrand	15	chr10	110918593	110918683	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-6.1363
chr11	5441763	5441781	protein_coding	Ccdc117	intron	ENSMUSG00000020482	NonProperStrand	20	chr1	39605591	39605691	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-9.5593
chr1	194423806	194423823	protein_coding	Hhat	intron	ENSMUSG00000037375	ProperStrand	12	chr11	117828072	117828143	protein_coding	Socs3	utr3	ENSMUSG00000053113	ProperStrand	137	1	-14.9361
chr11	53587163	53587206	protein_coding	Irf1	exon	ENSMUSG00000018899	ProperStrand	17	chr5	149113021	149113038	protein_coding	Mtus2	exon	ENSMUSG00000029651	ProperStrand	114	1	-14.5935
chr11	97904945	97905010	protein_coding	Stac2	exon	ENSMUSG00000017400	ProperStrand	10	chr18	69842429	69842777	protein_coding	Tcf4	utr3	ENSMUSG00000053477	ProperStrand	13	1	-22.1951
chr11	3139087	3139148	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr9	108278964	108279015	protein_coding	Usp4	intron	ENSMUSG00000032612	ProperStrand	29	1	-10.2570
chr4	43505656	43505721	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr15	83412203	83412558	protein_coding	Ttll12	exon	ENSMUSG00000016757	ProperStrand	36	1	-4.0138
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr11	120347051	120349421	protein_coding	Mrpl12	exon	ENSMUSG00000039640	ProperStrand	49	1	-13.5656
chr9	46463978	46464068	DNA	RMER30	MER1_type	chr9RMER3046463980	NonProperStrand	1	chr9	46463848	46463938	LTR	ORR1E	MaLR	chr9ORR1E46463633	NonProperStrand	1	1	-inf
chr4	101331055	101331155	protein_coding	Leprot	utr3	ENSMUSG00000035212	ProperStrand	22	chr16	23110523	23110584	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.2978
chr19	18655521	18655621	protein_coding	Ostf1	utr3	ENSMUSG00000024725	ProperStrand	8	chr16	23110941	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.2180
mmu-miR-6238	1	20	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr16	23111695	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-1.9629
chr11	10026817	10026834	Other	RMER1A	Other	chr11RMER1A10026691	ProperStrand	5	mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	1	-11.0330
chr5	149858852	149858902	protein_coding	Hmgb1	utr3	ENSMUSG00000066551	ProperStrand	99	chr5	111121104	111121194	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-5.4512
chr10	127669166	127669217	protein_coding	Timeless	utr5	ENSMUSG00000039994	ProperStrand	53	chr2	32818898	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-5.7137
chr5	74489283	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chrX	99382777	99383234	protein_coding	Rps4x	exon	ENSMUSG00000031320	ProperStrand	139	1	-4.0085
chr4	116826591	116826923	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	chr5	121655016	121655155	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-1.2883
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr2	155601094	155601110	protein_coding	Mmp24	utr5	ENSMUSG00000027612	NonProperStrand	2	1	-16.3927
mmu-miR-6240	1	26	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	4	-7.9091
chr7	134673802	134673982	protein_coding	Srcap	exon	ENSMUSG00000053877	ProperStrand	69	chr19	8799050	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-5.5587
chr5	121070641	121070698	protein_coding	Ddx54	exon	ENSMUSG00000029599	ProperStrand	104	chr4	135261716	135261733	protein_coding	Il28ra	exon	ENSMUSG00000062157	ProperStrand	10	1	-15.9059
chr18	44555634	44555651	protein_coding	Dcp2	exon	ENSMUSG00000024472	ProperStrand	44	chr4	131865381	131865471	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-4.5926
chr19	22671445	22671463	protein_coding	Trpm3	intron	ENSMUSG00000052387	NonProperStrand	16	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-10.4162
chr12	58827133	58827152	protein_coding	Ttc6	intron	ENSMUSG00000046782	ProperStrand	5	chr9	121823892	121823908	protein_coding	Cyp8b1	exon	ENSMUSG00000050445	NonProperStrand	101	1	-17.3784
chr11	72266478	72266568	protein_coding	Spns2	utr3	ENSMUSG00000040447	ProperStrand	20	chr11	97642990	97643070	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.4938
chrX	156315498	156318061	protein_coding	Sh3kbp1	intron	ENSMUSG00000040990	ProperStrand	67	chr4	131908357	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-2.4279
chr14	76247710	76247846	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	chr7	29136525	29136655	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	93	-15.9505
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr2	167282917	167285213	protein_coding	Slc9a8	exon	ENSMUSG00000039463	ProperStrand	26	1	-8.0413
chr11	31269280	31269370	protein_coding	Stc2	intron	ENSMUSG00000020303	ProperStrand	18	chr7	116663634	116663724	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.7447
chr8	26773576	26773650	protein_coding	Whsc1l1	exon	ENSMUSG00000054823	ProperStrand	36	chr7	118219574	118219603	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-8.4974
mmu-miR-6238	2	19	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr4	131866155	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	5	-7.5371
chr13	44943716	45010266	protein_coding	Jarid2	exon	ENSMUSG00000038518	ProperStrand	372	chr16	23110456	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-1.0344
chr5	121975174	121975219	protein_coding	Mapkapk5	exon	ENSMUSG00000029454	ProperStrand	22	chr16	17276523	17276540	protein_coding	Tmem191c	exon	ENSMUSG00000055692	ProperStrand	16	1	-17.9442
mmu-miR-6240	1	23	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr10	80809668	80809684	protein_coding	Hmg20b	exon	ENSMUSG00000020232	ProperStrand	157	1	-4.0507
chr19	36525084	36530181	protein_coding	Pcgf5	utr3	ENSMUSG00000024805	ProperStrand	6	chr16	23110911	23110939	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.7876
chr5	110860361	110860461	protein_coding	Fbrsl1	intron	ENSMUSG00000043323	ProperStrand	131	chr1	162966002	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-2.2273
chr5	130112286	130112304	protein_coding	Mmp17	exon	ENSMUSG00000029436	NonProperStrand	15	chrX	84483703	84483751	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-11.0623
chr11	52666351	52666367	protein_coding	Fstl4	intron	ENSMUSG00000036264	ProperStrand	27	chr10	23505261	23505279	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.4811
chr4	131908236	131908748	lincRNA	Gm17300	exon	ENSMUSG00000091021	ProperStrand	109	chr11	6428076	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	NonProperStrand	91	5	-19.5196
chr17	75091533	75091623	protein_coding	Birc6	exon	ENSMUSG00000024073	ProperStrand	110	chr17	36994364	36994444	protein_coding	Trim26	exon	ENSMUSG00000024457	ProperStrand	5	1	-17.3037
chr18	35107621	35107773	protein_coding	Hspa9	exon	ENSMUSG00000024359	ProperStrand	166	chr7	148634784	148634836	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-2.1769
chr14	67537512	67537530	protein_coding	Pnma2	utr3	ENSMUSG00000046204	NonProperStrand	16	chr3	123210889	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	6	-inf
chr14	25228112	25228131	LTR	ETnERV2-int	ERVK	chr14ETnERV2-int25227925	NonProperStrand	14	chr12	82286529	82286564	protein_coding	Smoc1	utr3	ENSMUSG00000021136	ProperStrand	7	1	-inf
chr17	25860491	25860598	protein_coding	Chtf18	exon	ENSMUSG00000019214	NonProperStrand	1	chr14	76247711	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-inf
chr7	31895785	31899705	protein_coding	Hpn	exon	ENSMUSG00000001249	ProperStrand	126	chr17	36405586	36405603	protein_coding	Trim39	utr5	ENSMUSG00000045409	NonProperStrand	8	1	-15.9272
chr9	88419023	88419041	SINE	B4	B4	chr9B488418988	ProperStrand	75	chr1	88255846	88255867	protein_coding	Ncl	utr5	ENSMUSG00000026234	ProperStrand	1184	1	-6.9135
chr8	72287172	72287188	protein_coding	Zfp866	utr3	ENSMUSG00000043090	NonProperStrand	134	chr4	131908236	131908332	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-1.0485
chr18	34790036	34790231	protein_coding	Kif20a	exon	ENSMUSG00000003779	ProperStrand	50	chr3	153573527	153573573	snoRNA	ENSMUSG00000064731_Snord45b	.	ENSMUSG00000064731	ProperStrand	205	1	-11.2164
chr19	41990155	41990217	protein_coding	Pgam1	exon	ENSMUSG00000011752	ProperStrand	124	chr4	131865932	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.7856
chr9	54582217	54582286	protein_coding	Wdr61	utr5	ENSMUSG00000061559	ProperStrand	14	chr12	106269284	106269384	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-7.0112
chr3	104627112	104627202	protein_coding	Capza1	utr3	ENSMUSG00000070372	ProperStrand	42	chr7	117189932	117189977	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.9949
chr5	138608654	138608860	protein_coding	Mcm7	exon	ENSMUSG00000029730	ProperStrand	258	chr2	92245207	92245224	protein_coding	Cry2	utr3	ENSMUSG00000068742	NonProperStrand	5	2	-inf
chr11	115364460	115375545	protein_coding	Hn1	exon	ENSMUSG00000020737	ProperStrand	18	chr7	19878198	19878232	protein_coding	Rtn2	intron	ENSMUSG00000030401	ProperStrand	5	3	-20.1049
chr1	74470436	74470453	protein_coding	Vil1	exon	ENSMUSG00000026175	ProperStrand	68	chr1	88247816	88247875	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-4.8548
mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	3	-5.0793
chr1	135924267	135924357	SINE	B1_Mus2	Alu	chr1B1_Mus2135924200	ProperStrand	1	chr1	135924418	135924508	SINE	B3	B2	chr1B3135924369	ProperStrand	1	1	-inf
chr5	77427997	77428087	protein_coding	Srp72	utr3	ENSMUSG00000036323	ProperStrand	41	chr8	73419693	73419773	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	12	-inf
chr9	31126143	31134830	protein_coding	Prdm10	exon	ENSMUSG00000042496	NonProperStrand	6	chr7	116663655	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-7.0045
chr1	135518240	135554273	protein_coding	Zc3h11a	intron	ENSMUSG00000026464	ProperStrand	102	chr8	73419650	73419775	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	4	-8.2021
chr12	112565198	112565215	protein_coding	Cdc42bpb	intron	ENSMUSG00000021279	ProperStrand	128	chr18	35716698	35716761	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.0494
chr11	99080617	99080695	protein_coding	Smarce1	exon	ENSMUSG00000037935	ProperStrand	38	chr11	106362341	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-6.7466
chr11	63264079	63264095	LTR	ORR1D1	MaLR	chr11ORR1D163264002	NonProperStrand	11	chr19	8798506	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-8.6239
chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	chr7	4745220	4746059	protein_coding	Rpl28	exon	ENSMUSG00000030432	ProperStrand	220	2	-10.4697
chr1	51527760	51527788	protein_coding	Obfc2a	utr3	ENSMUSG00000026107	ProperStrand	9	chr4	131865937	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.2544
chr8	69384876	69384893	protein_coding	Naf1	exon	ENSMUSG00000014907	NonProperStrand	2	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-8.7800
chr18	57400307	57400324	protein_coding	Megf10	exon	ENSMUSG00000024593	ProperStrand	143	chr15	79082657	79082673	protein_coding	Slc16a8	exon	ENSMUSG00000032988	ProperStrand	3	1	-17.8926
chr8	14582431	14582449	protein_coding	Dlgap2	intron	ENSMUSG00000047495	ProperStrand	20	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.6810
chr15	84607496	84607549	LTR	RLTR13C2	ERVK	chr15RLTR13C284607281	ProperStrand	1	chr12	111891529	111891629	protein_coding	Dync1h1	intron	ENSMUSG00000018707	ProperStrand	648	1	-inf
chr2	27281841	27281857	protein_coding	Vav2	exon	ENSMUSG00000009621	NonProperStrand	31	chr9	56775853	56775870	protein_coding	Snx33	utr5	ENSMUSG00000032733	NonProperStrand	116	1	-13.3222
chr7	133940193	133940391	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	chr19	8799046	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	5	-7.7028
chr16	72800514	72800532	protein_coding	Robo1	intron	ENSMUSG00000022883	NonProperStrand	188	chr11	57872826	57872856	protein_coding	Larp1	utr3	ENSMUSG00000037331	ProperStrand	201	1	-8.6015
chr10	84067782	84067842	protein_coding	Tcp11l2	intron	ENSMUSG00000020034	ProperStrand	3	chr1	63225652	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	3	-inf
chr16	44216778	44216864	protein_coding	Gm608	exon	ENSMUSG00000068284	ProperStrand	17	chr17	35089182	35089258	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-8.0062
chr15	102451775	102451792	protein_coding	Atf7	intron	ENSMUSG00000052414	ProperStrand	14	chr2	22444548	22444575	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-10.7294
chr6	131330344	131330424	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	ProperStrand	408	chr8	129468780	129468870	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	4	-5.1368
chr2	37502726	37502742	protein_coding	Strbp	utr5	ENSMUSG00000026915	ProperStrand	90	chr12	82881991	82882040	protein_coding	Map3k9	utr5	ENSMUSG00000042724	ProperStrand	92	1	-11.6399
chr13	111015989	111016007	protein_coding	Rab3c	intron	ENSMUSG00000021700	ProperStrand	12	chr2	132078783	132078806	protein_coding	Pcna	utr5	ENSMUSG00000027342	ProperStrand	25	1	-18.2437
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr18	78313257	78316891	protein_coding	Slc14a1	utr5	ENSMUSG00000059336	ProperStrand	7	1	-13.1405
chr7	4745686	4745742	protein_coding	Rpl28	exon	ENSMUSG00000030432	ProperStrand	220	chr19	8798484	8798550	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-2.7906
chr1	71662064	71665191	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr4	3762227	3762292	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	1	-4.1084
chr8	98263728	98263818	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	chr18	35716686	35716767	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	8	-5.5444
chr17	13112450	13112488	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	chr4	131866614	131866670	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	1	-1.0434
chr13	81962989	81963009	SINE	B1F2	Alu	chr13B1F281962960	ProperStrand	15	chr2	145076804	145209253	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-10.5332
chr17	46726972	46727033	protein_coding	Ptk7	exon	ENSMUSG00000023972	ProperStrand	101	chr1	180885279	180885295	protein_coding	Smyd3	utr3	ENSMUSG00000055067	NonProperStrand	190	1	-9.9553
chr17	4082092	4082746	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr7	116663633	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	19	-inf
chr2	26493435	26493515	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr9	119536351	119539207	protein_coding	Scn10a	exon	ENSMUSG00000034533	ProperStrand	37	1	-7.1553
chr14	76163196	76166778	protein_coding	Slc25a30	exon	ENSMUSG00000022003	ProperStrand	6	chr16	23111705	23111785	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-6.2752
chr6	146063499	146063515	protein_coding	Itpr2	intron	ENSMUSG00000030287	NonProperStrand	42	chr11	6428105	6428156	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.8502
chr5	122691914	122691930	protein_coding	Hvcn1	utr3	ENSMUSG00000064267	ProperStrand	182	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.4386
chr2	32617587	32617636	protein_coding	Tor2a	utr3	ENSMUSG00000009563	ProperStrand	8	chr7	29136577	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	5	-18.9806
chr2	56968378	56968396	protein_coding	Nr4a2	intron	ENSMUSG00000026826	ProperStrand	24	chr1	181320396	181320424	protein_coding	Smyd3	intron	ENSMUSG00000055067	NonProperStrand	190	1	-12.8559
chr7	115258029	115258049	LINE	L1_Mus2	L1	chr7L1_Mus2115256645	ProperStrand	12	chr4	141446306	141446353	antisense	Gm13643	.	ENSMUSG00000085922	NonProperStrand	1	1	-inf
chr2	23043326	23043342	protein_coding	Yme1l1	exon	ENSMUSG00000026775	ProperStrand	20	chr7	106628493	106628530	protein_coding	Rps3	exon	ENSMUSG00000030744	ProperStrand	159	1	-13.5875
chr15	12251612	12251628	protein_coding	Golph3	exon	ENSMUSG00000022200	ProperStrand	35	chr13	76341035	76341055	protein_coding	Fam81b	intron	ENSMUSG00000078966	NonProperStrand	220	1	-11.7961
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr16	35932620	35932636	protein_coding	Dtx3l	exon	ENSMUSG00000049502	ProperStrand	152	1	-6.7436
chr15	60661082	60661099	lincRNA	9930014A18Rik	exon	ENSMUSG00000044513	ProperStrand	54	chr15	43094766	43094834	protein_coding	Eif3e	exon	ENSMUSG00000022336	ProperStrand	17	1	-16.0883
chr19	4763976	4763996	protein_coding	Rbm4b	intron	ENSMUSG00000033760	NonProperStrand	7	chr11	6428079	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-12.1615
chr12	110874223	110874265	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	6	-12.9072
chr14	15572351	15572371	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr16	23111373	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-1.7957
chr17	9861374	9861391	protein_coding	Pabpc6	exon	ENSMUSG00000046173	NonProperStrand	1	chr6	71832629	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-inf
chr13	51743579	51743661	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	chr8	73419657	73419747	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	9	-1.0930
mmu-miR-6238	1	18	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr8	129468746	129468879	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	5	-9.6699
chr19	10059061	10059157	protein_coding	Fth1	exon	ENSMUSG00000024661	ProperStrand	75	chr7	116663718	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	4	-8.0223
chr9	108201714	108201764	protein_coding	Amt	exon	ENSMUSG00000032607	ProperStrand	6	chr10	23505152	23505215	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-9.1162
chr2	167311943	167311960	protein_coding-noncoding	Spata2	utr3	ENSMUSG00000047030	NonProperStrand	6	chr1	89681249	89681349	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-10.1537
chr12	32132407	32132497	protein_coding-noncoding	Slc26a3	utr5	ENSMUSG00000001225	NonProperStrand	1	chr12	32131837	32131927	protein_coding	Slc26a3	utr5	ENSMUSG00000001225	NonProperStrand	3	1	-inf
chr18	10354222	10354238	protein_coding	Greb1l	intron	ENSMUSG00000042942	ProperStrand	23	chr7	117166722	117166818	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-6.7066
chr18	7903173	7903273	protein_coding	Wac	intron	ENSMUSG00000024283	ProperStrand	38	chr9	120038607	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.8790
chr15	101194798	101194815	protein_coding	Krt80	utr5	ENSMUSG00000037185	ProperStrand	7	chr7	134671387	134671492	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-12.2896
chr7	52974903	52974936	protein_coding	Rpl18	exon	ENSMUSG00000059070	ProperStrand	116	chr5	121655017	121655107	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.5638
chr5	120577063	120577079	protein_coding	Rbm19	exon	ENSMUSG00000029594	ProperStrand	40	chr18	35716764	35716822	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.8651
chr5	34346965	34347005	protein_coding	Nat8l	utr3	ENSMUSG00000048142	ProperStrand	2	chr16	23111389	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-inf
chr19	36908983	36909055	protein_coding	Tnks2	utr5	ENSMUSG00000024811	ProperStrand	133	chr7	148634789	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	5	-11.7251
chr4	73062336	73062426	protein_coding	Gm11487	exon	ENSMUSG00000066137	ProperStrand	1	chr4	73076684	73076774	pseudogene	Gm11486	.	ENSMUSG00000080222	ProperStrand	1	1	-inf
chr10	127556857	127558169	protein_coding	Baz2a	exon	ENSMUSG00000040054	ProperStrand	274	chr17	24665453	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-2.1798
chr17	35972921	35972947	protein_coding	Tubb5	exon	ENSMUSG00000001525	NonProperStrand	5	chr16	57391670	57391748	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	1	-15.4634
chrX	147506978	147507014	protein_coding	Fgd1	exon	ENSMUSG00000025265	ProperStrand	96	chr4	131865866	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.0955
chr17	49099990	49100055	protein_coding	Lrfn2	intron	ENSMUSG00000040490	NonProperStrand	9	chr3	32265492	32265509	protein_coding	4930429B21Rik	utr3	ENSMUSG00000049507	ProperStrand	1	1	-inf
chr13	19719159	19721936	protein_coding	Sfrp4	exon	ENSMUSG00000021319	ProperStrand	6	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-7.7732
chr5	121655518	121658410	protein_coding	Rpl6	exon	ENSMUSG00000029614	ProperStrand	332	chr7	116664811	116664901	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-0.7539
chr16	5077638	5077654	protein_coding	Ubn1	exon	ENSMUSG00000039473	NonProperStrand	5	chrX	131122088	131122480	protein_coding	Rpl36a	exon	ENSMUSG00000079435	ProperStrand	53	1	-18.1807
chr11	73117691	73117709	SINE	B4A	B4	chr11B4A73117575	NonProperStrand	1	chr3	108357491	108357542	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-inf
chr1	95468382	95468399	protein_coding	Farp2	intron	ENSMUSG00000034066	NonProperStrand	8	chr3	108357255	108357355	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-8.5976
chr15	102305054	102305075	protein_coding	Pcbp2	exon	ENSMUSG00000056851	ProperStrand	164	chr7	134704377	134704477	protein_coding	Srcap	utr3	ENSMUSG00000090663	ProperStrand	28	4	-19.2165
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr6	117121583	117121600	protein_coding	Cxcl12	exon	ENSMUSG00000061353	NonProperStrand	6	1	-12.5473
chrX	93355463	93355505	protein_coding	Msn	exon	ENSMUSG00000031207	ProperStrand	71	chr15	79913287	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	4	-11.1212
chr12	83291873	83291890	protein_coding	Sipa1l1	intron	ENSMUSG00000042700	NonProperStrand	12	chr18	6784870	6784895	protein_coding	Rab18	intron	ENSMUSG00000073639	ProperStrand	9	1	-19.9590
chr9	67799211	67799301	protein_coding	Vps13c	exon	ENSMUSG00000035284	ProperStrand	69	chr9	15119646	15119726	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	15	-19.5750
chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr2	49307063	49307163	protein_coding	Epc2	utr5	ENSMUSG00000069495	ProperStrand	15	1	-6.2900
chrX	11635848	11635865	protein_coding	Bcor	exon	ENSMUSG00000040363	NonProperStrand	293	chr19	8799022	8799041	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-2.8485
chr10	67560103	67560176	protein_coding	Arid5b	exon	ENSMUSG00000019947	ProperStrand	43	chr5	124008759	124008776	protein_coding	Vps33a	exon	ENSMUSG00000029434	NonProperStrand	1	1	-inf
chr19	5105047	5105127	protein_coding	Rab1b	intron	ENSMUSG00000024870	ProperStrand	133	chr4	102835063	102835153	protein_coding	Mier1	exon	ENSMUSG00000028522	ProperStrand	7	1	-16.1811
chr10	105278600	105278616	protein_coding	Ccdc59	exon	ENSMUSG00000019897	ProperStrand	21	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-9.8582
chr5	110726422	110726471	protein_coding	Pole	exon	ENSMUSG00000007080	ProperStrand	125	chr9	69104180	69104197	protein_coding	Rora	intron	ENSMUSG00000032238	ProperStrand	25	1	-13.6082
chrX	133268955	133269028	protein_coding	Morf4l2	utr5	ENSMUSG00000031422	ProperStrand	113	chr19	8799833	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-3.7455
chr14	21513317	21513390	protein_coding	Sec24c	utr3	ENSMUSG00000039367	ProperStrand	60	chr7	52381973	52381996	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-6.7119
chr8	3803150	3803191	misc_RNA	RNaseP_nuc	.	ENSMUSG00000088025	ProperStrand	328	chr1	162966826	162966866	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-3.0341
chr11	74478331	74478406	protein_coding	1300001I01Rik	exon	ENSMUSG00000020741	ProperStrand	76	chr17	24856648	24856738	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-5.9611
chr12	102165324	102165369	protein_coding	Ccdc88c	intron	ENSMUSG00000021182	ProperStrand	151	chr9	72439621	72441125	protein_coding	Rfx7	exon	ENSMUSG00000037674	ProperStrand	20	1	-13.6905
chr9	37460632	37460679	protein_coding	Tbrg1	exon	ENSMUSG00000011114	ProperStrand	56	chr4	131908688	131908733	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.3189
chr18	34492720	34492796	protein_coding-noncoding	Srp19	utr5	ENSMUSG00000014504	ProperStrand	1	chr1	87983950	87983997	snoRNA	ENSMUSG00000077274_SNORA26	.	ENSMUSG00000077274	ProperStrand	361	1	-inf
chr7	29603896	29606476	protein_coding	Hnrnpl	exon	ENSMUSG00000015165	ProperStrand	150	chr11	97642965	97643094	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	7	-10.3014
chrX	103047103	103047146	protein_coding-noncoding	Atrx	utr3	ENSMUSG00000031229	ProperStrand	1	chr17	45707341	45707411	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	1	-inf
chr11	113462415	113462432	protein_coding	Slc39a11	intron	ENSMUSG00000041654	ProperStrand	25	chr17	35299507	35299563	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-6.4994
chr4	41160829	41160879	protein_coding	Ubap2	utr5	ENSMUSG00000028433	ProperStrand	292	chr4	131866199	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-1.0843
chr4	43505743	43505823	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr1	129203343	129203433	protein_coding	Mgat5	utr5	ENSMUSG00000036155	ProperStrand	33	1	-4.1792
chr11	6519810	6519944	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	chr9	15119630	15119968	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	10	-2.7453
chr19	15962332	15962422	LINE	Lx4B	L1	chr19Lx4B15962351	ProperStrand	1	chr19	15961862	15961942	LTR	ORR1A2	MaLR	chr19ORR1A215961697	NonProperStrand	1	1	-inf
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr13	105938146	105938163	protein_coding	Rnf180	intron	ENSMUSG00000021720	ProperStrand	5	1	-13.8775
chr1	155754999	155755099	protein_coding	Glul	exon	ENSMUSG00000026473	ProperStrand	54	chr17	35088957	35089003	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	2	-9.8760
chr11	60020415	60020465	protein_coding	Srebf1	exon	ENSMUSG00000020538	ProperStrand	24	chr15	98672283	98672328	protein_coding	Mll2	exon	ENSMUSG00000048154	ProperStrand	170	1	-13.0798
chr6	65531877	65531895	LINE	L1Md_T	L1	chr6L1Md_T65530870	ProperStrand	1	mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	1	-inf
chr6	146366472	146366489	protein_coding	Itpr2	exon	ENSMUSG00000030287	ProperStrand	20	chr11	55296195	55296285	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-8.3823
chr1	40033580	40037422	protein_coding	Map4k4	exon	ENSMUSG00000026074	ProperStrand	348	chr7	52378398	52378432	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	1	-5.0395
chr2	154363216	154363327	protein_coding	Cbfa2t2	utr3	ENSMUSG00000038533	ProperStrand	99	chr17	24857806	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.5074
chr16	87486851	87486867	protein_coding	Cct8	exon	ENSMUSG00000025613	ProperStrand	65	chr17	13112464	13112533	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-4.4267
chr11	116299925	116300005	protein_coding	Fam100b	utr3	ENSMUSG00000050628	ProperStrand	97	chr11	6428076	6428166	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.3523
chr15	47345149	47345239	LINE	L1M2	L1	chr15L1M247345137	ProperStrand	1	chr15	47345437	47345527	LINE	Lx4B	L1	chr15Lx4B47345304	NonProperStrand	1	1	-inf
chr15	98350146	98350285	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	chr8	73419656	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	31	-2.4100
chr7	29123575	29123665	protein_coding	Supt5h	intron	ENSMUSG00000003435	NonProperStrand	4	chr7	31027011	31027101	protein_coding	Wdr62	intron	ENSMUSG00000037020	NonProperStrand	2	1	-inf
chr15	103070939	103071538	protein_coding	Hnrnpa1	exon	ENSMUSG00000046434	ProperStrand	68	chr7	148634776	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	3	-9.2310
chr13	9833551	9833659	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr17	35299507	35299642	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	12	-1.9608
chr17	27237301	27237353	protein_coding	Itpr3	intron	ENSMUSG00000042644	ProperStrand	137	chr15	80768968	80769008	protein_coding	Tnrc6b	utr3	ENSMUSG00000047888	ProperStrand	59	1	-11.6896
chr8	123094946	123095046	protein_coding	Gse1	exon	ENSMUSG00000031822	ProperStrand	97	chr17	35089181	35089220	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-4.5565
chr2	105012751	105012769	protein_coding	Wt1	utr3	ENSMUSG00000016458	NonProperStrand	338	chr9	15119330	15119430	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	5	-9.7718
chr15	76541224	76541240	protein_coding	Lrrc14	utr5	ENSMUSG00000033728	ProperStrand	52	chr7	148634701	148634762	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-4.2567
chr7	20343843	20343911	protein_coding	Bcam	exon	ENSMUSG00000002980	ProperStrand	43	chr7	118219575	118219614	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-4.8084
chr2	121168922	121168957	protein_coding	Ppip5k1	exon	ENSMUSG00000033526	ProperStrand	85	chr14	65372769	65372789	snoRNA	ENSMUSG00000064442_SNORA36	.	ENSMUSG00000064442	ProperStrand	296	4	-19.1863
chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	chr7	134726265	134726281	protein_coding	Phkg2	exon	ENSMUSG00000030815	ProperStrand	3	1	-15.6660
chr5	121070274	121077130	protein_coding	Ddx54	exon	ENSMUSG00000029599	ProperStrand	104	chr16	23111387	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	6	-6.0005
chr11	69414482	69414498	protein_coding	Atp1b2	utr3	ENSMUSG00000041329	ProperStrand	28	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-8.7642
chr3	133129640	133129704	protein_coding	Tet2	utr3	ENSMUSG00000040943	ProperStrand	192	chr4	131865394	131865484	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-1.9556
chr10	6450631	6450649	protein_coding	Plekhg1	intron	ENSMUSG00000040624	NonProperStrand	75	chr6	71832629	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-5.1760
chr11	102162338	102162357	SINE	B4	B4	chr11B4102162261	ProperStrand	1	chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	1	-inf
chr10	18135902	18135919	protein_coding	Nhsl1	intron	ENSMUSG00000039835	ProperStrand	18	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-11.3672
chr11	75316785	75316862	protein_coding	Prpf8	utr3	ENSMUSG00000020850	ProperStrand	255	chr15	79908930	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-2.7681
chr8	72440545	72441367	protein_coding	Gatad2a	exon	ENSMUSG00000036180	ProperStrand	112	chr6	134657632	134657722	protein_coding	Loh12cr1	intron	ENSMUSG00000042992	ProperStrand	16	1	-14.7497
chr2	69829527	69829569	protein_coding	Ubr3	exon	ENSMUSG00000044308	ProperStrand	62	chr9	15118286	15118322	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.4065
chr12	83273228	83273262	protein_coding	Sipa1l1	intron	ENSMUSG00000042700	ProperStrand	84	chr10	30530980	30531020	tRNA	tRNA81-GluCTC	.	135856	ProperStrand	154	1	-10.7453
chr13	38593035	38593135	protein_coding	Txndc5	utr3	ENSMUSG00000038991	ProperStrand	48	chr4	131908236	131908286	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.7522
chr18	5088667	5088714	protein_coding	Svil	exon	ENSMUSG00000024236	ProperStrand	19	chr1	88247740	88247826	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	2	-11.8993
chr16	13813823	13814263	protein_coding	Rrn3	utr3	ENSMUSG00000022682	ProperStrand	58	chr3	123210890	123210985	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-3.8170
chr10	98620559	98620582	protein_coding	Poc1b	intron	ENSMUSG00000019952	NonProperStrand	7	chr8	32260335	32260424	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	3	-19.2069
chr8	77742558	77742574	protein_coding	Rasd2	exon	ENSMUSG00000034472	NonProperStrand	237	chr12	17552948	17552994	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-2.5523
chr6	148843964	148844064	protein_coding	Caprin2	utr5	ENSMUSG00000030309	ProperStrand	12	chr9	120037992	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-7.9197
chr11	76594825	76594842	protein_coding	Cpd	utr3	ENSMUSG00000020841	NonProperStrand	4	chr2	3375678	3375735	protein_coding	Suv39h2	utr3	ENSMUSG00000026646	ProperStrand	6	1	-19.4007
chr6	148870942	148870986	protein_coding	Fam60a	utr3	ENSMUSG00000039985	ProperStrand	68	chr2	144087324	144087383	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	5	-19.5119
chr8	13952286	13952381	protein_coding	2610019F03Rik	utr3	ENSMUSG00000050052	ProperStrand	4	chr9	120038012	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-10.3050
chr9	82723543	82723559	protein_coding	Irak1bp1	utr5	ENSMUSG00000032251	NonProperStrand	16	chr19	8799836	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-7.5773
chr6	17587950	17587966	protein_coding	Capza2	intron	ENSMUSG00000015733	ProperStrand	23	chr19	8798484	8798521	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-7.1123
chr13	64863287	64863304	protein_coding	Cntnap3	exon	ENSMUSG00000033063	ProperStrand	87	chr11	97642997	97643079	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.8614
chrX	84483699	84483716	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr15	4962082	4962098	protein_coding	C7	utr3	ENSMUSG00000079105	ProperStrand	63	1	-8.1514
chr8	86115886	86115986	protein_coding	Tecr	intron	ENSMUSG00000031708	ProperStrand	100	chr16	23111754	23111824	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.1554
chr1	108655950	108655969	protein_coding	Kdsr	intron	ENSMUSG00000009905	NonProperStrand	8	chr16	37777390	37777408	protein_coding	Fstl1	exon	ENSMUSG00000022816	ProperStrand	179	1	-15.2301
chr11	77837052	77837152	protein_coding	Phf12	exon	ENSMUSG00000037791	ProperStrand	21	chr5	121655033	121655099	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.7781
chr16	70537136	70537153	protein_coding	Gbe1	intron	ENSMUSG00000022707	NonProperStrand	17	chr18	33954815	33954870	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-5.9445
chr4	104723895	104724554	protein_coding	Prkaa2	exon	ENSMUSG00000028518	ProperStrand	12	chr4	131865853	131865933	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.6729
chr4	118805841	118805971	protein_coding	Slc2a1	exon	ENSMUSG00000028645	ProperStrand	361	chrX	93136011	93136027	protein_coding	Las1l	exon	ENSMUSG00000057421	ProperStrand	248	1	-6.8904
chr15	98604924	98606960	protein_coding	Wnt10b	exon	ENSMUSG00000022996	NonProperStrand	189	chr8	13416897	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-4.2297
chr8	106996679	106996779	protein_coding	Ccdc79	exon	ENSMUSG00000052616	ProperStrand	5	chr19	8799022	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-10.9603
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr8	34802321	34802416	snoRNA	ENSMUSG00000088856_SNORA48	.	ENSMUSG00000088856	ProperStrand	236	1	-5.1003
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr9	107949141	107949220	protein_coding	Ip6k1	utr3	ENSMUSG00000032594	ProperStrand	61	2	-10.2669
chrX	20246285	20246365	protein_coding	Uba1	exon	ENSMUSG00000001924	ProperStrand	156	chr2	84884543	84885594	protein_coding	Ssrp1	exon	ENSMUSG00000027067	ProperStrand	118	1	-10.0380
chr1	121520542	121530134	protein_coding	Epb4.1l5	exon	ENSMUSG00000026383	ProperStrand	22	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-10.9562
chr17	88077661	88077677	protein_coding	Msh2	exon	ENSMUSG00000024151	ProperStrand	124	chr9	119923243	119923260	protein_coding	Xirp1	utr3	ENSMUSG00000079243	NonProperStrand	4	1	-17.5629
chr1	133831175	133831223	protein_coding	Nucks1	utr3	ENSMUSG00000026434	ProperStrand	59	chrX	34622906	34622923	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-3.2015
chr2	146862506	146863969	protein_coding	Xrn2	exon	ENSMUSG00000027433	ProperStrand	48	chr4	131908299	131908344	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-4.9944
chr16	23110986	23111010	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr9	31206816	31206887	protein_coding	Nfrkb	exon	ENSMUSG00000042185	ProperStrand	34	1	-10.1582
chr3	108707020	108707103	protein_coding	Prpf38b	exon	ENSMUSG00000027881	ProperStrand	23	chr12	106269352	106269442	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-6.0077
chr4	131908356	131908810	lincRNA	Gm17300	exon	ENSMUSG00000091021	ProperStrand	109	chr18	35714191	35714281	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	NonProperStrand	47	1	-12.6079
chr6	42627407	42627482	protein_coding	Fam115a	exon	ENSMUSG00000036667	ProperStrand	13	chr11	97642952	97643007	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-8.8714
chr13	32934951	32934969	protein_coding	Serpinb1a	exon	ENSMUSG00000044734	NonProperStrand	1	chr11	69481335	69481430	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-inf
chr17	88382881	88383802	protein_coding	Msh6	exon	ENSMUSG00000005370	ProperStrand	150	chr4	86232405	86232485	snoRNA	ENSMUSG00000088958_Scarna8	.	ENSMUSG00000088958	ProperStrand	366	1	-7.8593
chr2	4974190	4974207	protein_coding	Optn	exon	ENSMUSG00000026672	ProperStrand	451	chr2	75499828	75499869	protein_coding	Hnrnpa3	exon	ENSMUSG00000059005	ProperStrand	289	1	-6.1519
chr17	47748275	47748295	protein_coding	Bysl	utr5	ENSMUSG00000023988	ProperStrand	48	chr4	131866237	131866292	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-4.0833
chr5	123622050	123622066	protein_coding	Hpd	exon	ENSMUSG00000029445	ProperStrand	254	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-4.9050
chr8	98293754	98294490	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	chr3	95980284	95980321	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	2	-6.1854
chr13	68719455	68719494	protein_coding	Mtrr	exon	ENSMUSG00000034617	ProperStrand	14	chr8	73419725	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-13.9391
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr7	51505506	51505592	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	2	-3.2569
chr1	107442005	107554337	protein_coding	Pign	exon	ENSMUSG00000056536	ProperStrand	7	chr12	106269284	106269557	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	2	-13.6979
chr11	60257002	60257056	protein_coding	4933439F18Rik	utr3	ENSMUSG00000018415	ProperStrand	26	chr18	63908609	63908625	protein_coding	Wdr7	intron	ENSMUSG00000040560	NonProperStrand	180	1	-12.8020
chr10	80641590	80645093	protein_coding	Eef2	utr3	ENSMUSG00000034994	ProperStrand	2244	chr11	77995189	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	6	-4.3100
chr3	26212911	26213001	LINE	Lx	L1	chr3Lx26211214	NonProperStrand	1	chr4	92951604	92951694	LINE	L1_Mus4	L1	chr4L1_Mus492951163	NonProperStrand	1	1	-inf
chr3	88117209	88117480	protein_coding	Cct3	exon	ENSMUSG00000001416	ProperStrand	82	chr17	35299558	35299638	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-4.1809
chr6	125113451	125113527	protein_coding	Gapdh	intron	ENSMUSG00000057666	ProperStrand	356	chr15	98350177	98350268	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	8	-15.4323
chr1	107597549	107597639	protein_coding	2310035C23Rik	intron	ENSMUSG00000026319	ProperStrand	14	chr19	8800386	8800466	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-6.3636
chr12	101623875	101623912	protein_coding	Ttc7b	intron	ENSMUSG00000033530	ProperStrand	49	chr7	116663697	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.8648
chrX	91286018	91286034	antisense	Gm14798	.	ENSMUSG00000087640	ProperStrand	1	chr11	62416575	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-inf
chr4	129516347	129516365	protein_coding	Ptp4a2	utr5	ENSMUSG00000028788	ProperStrand	27	chr15	98350146	98350283	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	2	-10.2868
chr5	123238371	123256305	protein_coding	Anapc5	exon	ENSMUSG00000029472	ProperStrand	92	chr4	131866224	131866292	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	7	-18.8791
chr10	80641710	80641759	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	chr7	118219574	118219612	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	5	-2.0739
chr14	25312668	25312711	protein_coding	Rps24	exon	ENSMUSG00000025290	ProperStrand	110	chr2	26768371	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-4.4307
chr10	79203196	79203212	protein_coding	Polrmt	intron	ENSMUSG00000020329	NonProperStrand	5	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-16.8426
chr1	30881352	30886691	protein_coding	Phf3	exon	ENSMUSG00000048874	NonProperStrand	3	chr1	162967544	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-9.6828
chr3	153575121	153575170	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	chr2	113673426	113673526	protein_coding	Arhgap11a	exon	ENSMUSG00000041219	ProperStrand	47	4	-inf
chr8	63416272	63417365	protein_coding	Clcn3	exon	ENSMUSG00000004319	ProperStrand	93	chr11	97642952	97643008	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-3.2280
chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	chr9	59387597	59387654	protein_coding	Hexa	exon	ENSMUSG00000025232	ProperStrand	12	1	-13.7600
chr11	109093006	109093023	protein_coding	Rgs9	intron	ENSMUSG00000020599	ProperStrand	18	chr1	187142526	187144756	protein_coding	Iars2	exon	ENSMUSG00000026618	ProperStrand	68	1	-15.4798
chr7	81428439	81428455	protein_coding	Slco3a1	utr3	ENSMUSG00000025790	ProperStrand	14	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-9.9284
chr6	65739949	65740033	protein_coding	Prdm5	intron	ENSMUSG00000029913	ProperStrand	50	chr16	23111451	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.5189
chr5	104281607	104281707	protein_coding	Aff1	utr3	ENSMUSG00000029313	ProperStrand	82	chr1	162965986	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-5.2375
chrX	130496426	130496668	protein_coding	Sytl4	exon	ENSMUSG00000031255	ProperStrand	169	chr1	162965979	162965999	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	3	-5.0882
chr10	44083549	44083567	protein_coding	Atg5	utr3	ENSMUSG00000038160	ProperStrand	12	chr5	130300419	130300460	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-5.5517
chr11	102294588	102294611	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	1	-3.8108
chr15	79116786	79116886	protein_coding	Pla2g6	utr3	ENSMUSG00000042632	ProperStrand	32	chr4	131866629	131866676	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	1	-10.3725
chr16	94798990	94799060	protein_coding	Dyrk1a	intron	ENSMUSG00000022897	ProperStrand	17	chr16	23110912	23111002	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.8783
chr10	15688906	15688986	LINE	L1_Mur1	L1	chr10L1_Mur115688155	NonProperStrand	1	chr10	15692027	15692117	LINE	L1_Mur1	L1	chr10L1_Mur115688155	ProperStrand	1	1	-inf
chr11	82692475	82692491	protein_coding	Rad51l3	exon	ENSMUSG00000018841	ProperStrand	112	chr5	151755615	151755632	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	2	-10.5041
chr5	23031348	23031364	protein_coding	Srpk2	exon	ENSMUSG00000062604	ProperStrand	51	chr10	41644311	41644329	protein_coding	Armc2	exon	ENSMUSG00000071324	ProperStrand	281	1	-10.5459
chr11	87172190	87172206	protein_coding	Ppm1e	exon	ENSMUSG00000046442	ProperStrand	112	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-7.6800
chrX	71533839	71534003	protein_coding	Taz	exon	ENSMUSG00000009995	ProperStrand	59	chr11	48616641	48616706	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	2	-14.8352
chr12	88269434	88269524	SINE	B3	B2	chr12B388269442	NonProperStrand	1	chr12	88269702	88269792	Simple_repeat	(TTC)n	Simple_repeat	chr12(TTC)n88269728	NonProperStrand	1	1	-inf
chr19	25484358	25484374	protein_coding	Kank1	exon	ENSMUSG00000032702	ProperStrand	218	chr5	139711573	139711641	protein_coding	Sun1	exon	ENSMUSG00000036817	ProperStrand	108	1	-9.5465
chr11	67167096	67167112	protein_coding	Myh13	exon	ENSMUSG00000060180	ProperStrand	145	chr9	15119643	15119712	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.2449
chr9	96989936	96989984	protein_coding-noncoding	Slc25a36	utr3	ENSMUSG00000032449	ProperStrand	10	chr8	123621758	123621775	protein_coding	Mthfsd	utr3	ENSMUSG00000031816	ProperStrand	2	1	-inf
chr2	22804973	22805008	protein_coding	Abi1	intron	ENSMUSG00000058835	ProperStrand	24	chr11	69483194	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.1173
chr6	25915647	25915667	LTR	MLT1A0-int	MaLR	chr6MLT1A0-int25915382	ProperStrand	1	chr16	23111451	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-inf
chr17	4082153	4082253	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr8	32260335	32260371	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-1.6830
chr3	51054384	51054414	protein_coding	Ccrn4l	exon	ENSMUSG00000023087	ProperStrand	8	chr8	114369051	114378073	protein_coding	Cfdp1	exon	ENSMUSG00000031954	ProperStrand	32	3	-19.0196
chr5	147646625	147647519	protein_coding	Rpl21	exon	ENSMUSG00000041453	ProperStrand	112	chr16	23110852	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	8	-3.1819
chr4	4703541	4705343	protein_coding	Impad1	exon	ENSMUSG00000066324	ProperStrand	23	chr7	117166760	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	4	-19.0218
chr2	125657969	125658043	protein_coding	Cops2	exon	ENSMUSG00000027206	ProperStrand	10	chr15	98356826	98356868	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	1	-11.4092
chr18	82773672	82773688	protein_coding	Zfp236	exon	ENSMUSG00000041258	NonProperStrand	117	chr5	108336363	108336406	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-3.6178
chr12	17552930	17556576	protein_coding	Odc1	intron	ENSMUSG00000011179	ProperStrand	173	chr16	23110851	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	11	-2.9130
chr13	74459935	74459961	protein_coding	Sdha	utr3	ENSMUSG00000021577	ProperStrand	70	chr17	35089181	35089237	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	2	-8.5238
chr3	89519017	89538798	protein_coding	Adar	utr5	ENSMUSG00000027951	ProperStrand	52	chr5	121655032	121655112	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.0158
chr18	49915075	49915091	protein_coding	Dtwd2	exon	ENSMUSG00000024505	NonProperStrand	3	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-14.9660
chr18	39309751	39387053	protein_coding	Arhgap26	exon	ENSMUSG00000036452	ProperStrand	46	chr8	13876097	13876187	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-7.6740
chr19	5800562	5801031	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr9	120038571	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	7	-1.2307
chr2	38542266	38542292	pseudogene	Gpr144	.	ENSMUSG00000083722	ProperStrand	1	chr16	23111777	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-inf
chr15	10504979	10504995	protein_coding	Rai14	exon	ENSMUSG00000022246	ProperStrand	180	chr6	71832629	71832687	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-3.5191
chr16	84732646	84734683	protein_coding	Mrpl39	exon	ENSMUSG00000022889	ProperStrand	32	chr3	123210854	123210870	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	6	-17.1761
chr5	100395047	100395111	protein_coding	Hnrnpd	exon	ENSMUSG00000000568	ProperStrand	33	chr1	162968264	162968289	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-8.0119
chr1	187237340	187237393	protein_coding	Eprs	exon	ENSMUSG00000026615	ProperStrand	149	chr18	35716698	35716755	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	6	-7.3229
chrX	84483691	84483716	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr5	108336363	108336406	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-1.4949
chr3	142351261	142351279	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr1	95309078	95310150	protein_coding	Hdlbp	exon	ENSMUSG00000034088	ProperStrand	97	2	-11.0175
chr19	37223549	37223566	protein_coding	Cpeb3	intron	ENSMUSG00000039652	NonProperStrand	23	chr17	24857716	24857770	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.0279
chr11	4667529	4667545	protein_coding	Nf2	utr3	ENSMUSG00000009073	ProperStrand	72	chr9	99483993	99484009	protein_coding	Dbr1	exon	ENSMUSG00000032469	ProperStrand	162	1	-10.9534
chr14	56159295	56159314	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	chr3	123210854	123210947	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-1.1179
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr12	71146391	71146407	protein_coding	Nin	exon	ENSMUSG00000021068	ProperStrand	95	2	-8.2500
chr13	93446548	93446565	protein_coding	Serinc5	intron	ENSMUSG00000021703	ProperStrand	57	chr7	54106424	54107323	protein_coding	Ldha	exon	ENSMUSG00000063229	ProperStrand	280	1	-10.3288
chr11	72258377	72258422	protein_coding	Mybbp1a	exon	ENSMUSG00000040463	ProperStrand	279	chr2	26494708	26494808	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	3	-2.6177
chrX	147476948	147476965	SINE	RSINE1	B4	chrXRSINE1147476844	NonProperStrand	20	chr9	50816824	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	1	-14.0385
chr11	5180669	5180685	protein_coding	Znrf3	utr3	ENSMUSG00000041961	NonProperStrand	210	chr13	23713948	23714004	protein_coding	Hist1h1e	exon	ENSMUSG00000051627	ProperStrand	41	1	-11.5695
chr5	66010987	66011798	protein_coding	Pds5a	exon	ENSMUSG00000029202	ProperStrand	62	chr2	131005220	131005236	protein_coding	Cenpb	exon	ENSMUSG00000068267	NonProperStrand	38	1	-14.1710
chr15	78866805	78866837	protein_coding	Gcat	exon	ENSMUSG00000006378	ProperStrand	15	chr8	73419657	73419726	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-5.7918
chr8	23488396	23488448	protein_coding	Slc25a15	exon	ENSMUSG00000031482	ProperStrand	13	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.3283
chr16	11144104	11144274	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr17	24665420	24665489	protein_coding	Rab26	intron	ENSMUSG00000079657	ProperStrand	11	2	-19.4090
chr9	67785565	67785593	protein_coding	Vps13c	exon	ENSMUSG00000035284	ProperStrand	69	chr15	5068429	5068480	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	2	-9.4428
chr2	103573100	103601299	protein_coding	Nat10	exon	ENSMUSG00000027185	ProperStrand	124	chr7	116663741	116663767	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-2.5902
chr13	118038118	118038153	protein_coding	Emb	exon	ENSMUSG00000021728	ProperStrand	13	chr4	131908236	131908341	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.0703
chr15	79269259	79272376	protein_coding	Csnk1e	utr5	ENSMUSG00000022433	ProperStrand	59	chr1	162965980	162965999	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-3.6344
chr7	67123693	67123723	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	chr17	35089210	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-2.0436
chr1	90123798	90124639	protein_coding	Heatr7b1	utr5	ENSMUSG00000079429	ProperStrand	147	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-4.8405
chrX	7459675	7459755	protein_coding	Pim2	utr3	ENSMUSG00000031155	NonProperStrand	1	chr3	68889086	68889176	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-inf
chr1	72166839	72166855	SINE	B4A	B4	chr1B4A72166632	ProperStrand	19	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-9.5536
chr12	5966789	5966879	LINE	Lx4B	L1	chr12Lx4B5966286	NonProperStrand	1	chr12	5967284	5967374	Low_complexity	CT-rich	Low_complexity	chr12CT-rich5967290	NonProperStrand	1	1	-inf
chr3	52388277	52388294	SINE	B4A	B4	chr3B4A52388218	ProperStrand	169	chr15	79913303	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-1.8089
chr11	48614372	48614435	snoRNA	ENSMUSG00000064500_SNORD95	.	ENSMUSG00000064500	ProperStrand	100	chr3	123210916	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.2935
chr19	7374855	7374893	protein_coding	Mark2	intron	ENSMUSG00000024969	ProperStrand	75	chr7	29136542	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.9970
chr2	179322379	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr10	110918617	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-1.6707
chr11	57855088	57874325	protein_coding	Larp1	utr3	ENSMUSG00000037331	ProperStrand	201	chr11	69483136	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	5	-5.0375
chr6	83111671	83111687	protein_coding	1700003E16Rik	exon	ENSMUSG00000030030	ProperStrand	352	chr16	56035948	56036001	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	1	-5.4455
chr10	79174524	79174633	protein_coding	Bsg	utr3	ENSMUSG00000023175	ProperStrand	107	chr11	116533843	116533893	snoRNA	ENSMUSG00000065640_Snord1c	.	ENSMUSG00000065640	ProperStrand	373	1	-8.4946
chr4	83938091	83938107	protein_coding	Bnc2	exon	ENSMUSG00000028487	ProperStrand	76	chr17	39985202	39985245	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-5.4691
chr11	3096850	3096940	protein_coding	Drg1	intron	ENSMUSG00000020457	NonProperStrand	2	chr11	3096751	3096831	pseudogene	Fau-ps2	.	ENSMUSG00000082658	NonProperStrand	1	1	-inf
chr15	96406795	96406909	protein_coding	Slc38a1	utr3	ENSMUSG00000023169	ProperStrand	69	chr1	162966008	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	5	-14.3815
chr3	102799703	102799740	protein_coding	Sike1	utr5	ENSMUSG00000027854	ProperStrand	9	chr7	133635786	133635814	protein_coding	Atxn2l	utr3	ENSMUSG00000032637	ProperStrand	219	1	-14.5990
chr2	120838633	120838676	protein_coding	Ccndbp1	exon	ENSMUSG00000023572	ProperStrand	3	chrX	71517926	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-12.8913
chr9	22136906	22136948	protein_coding	Anln	utr3	ENSMUSG00000036777	ProperStrand	133	chr9	78327899	78328064	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	4	-14.9510
chr6	97122776	97122792	protein_coding	Tmf1	intron	ENSMUSG00000030059	ProperStrand	33	chr5	3693225	3693241	protein_coding	Ankib1	exon	ENSMUSG00000040351	NonProperStrand	98	1	-13.5356
chr11	69266813	69267278	protein_coding	Dnahc2	exon	ENSMUSG00000005237	ProperStrand	95	chr7	116664803	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	4	-7.0367
chr12	86607734	86607778	protein_coding	Mlh3	exon	ENSMUSG00000021245	ProperStrand	28	chr4	131908819	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.4067
chr13	9833551	9833672	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr15	82980091	82980225	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	9	-7.4917
chr19	5307466	5307514	protein_coding	Gal3st3	exon	ENSMUSG00000047658	NonProperStrand	8	chr16	23110828	23110867	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.2180
chr4	155482317	155482335	LTR	RMER21A	ERV1	chr4RMER21A155481984	ProperStrand	7	chr15	76283775	76283959	protein_coding	Bop1	exon	ENSMUSG00000022557	ProperStrand	26	1	-19.4899
chr4	135521534	135521550	protein_coding	Gale	exon	ENSMUSG00000028671	ProperStrand	61	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-3.2108
chr7	129856114	129856131	protein_coding	Cacng3	intron	ENSMUSG00000066189	NonProperStrand	7	chr9	120038467	120038551	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-7.2707
chr1	141319671	141319687	protein_coding	Zbtb41	utr5	ENSMUSG00000033964	NonProperStrand	145	chr8	125944577	125944636	protein_coding	Tubb3	exon	ENSMUSG00000062380	ProperStrand	8	1	-15.6630
chr9	110534333	110534350	protein_coding-noncoding	Nbeal2	utr3	ENSMUSG00000056724	ProperStrand	6	chr9	15119632	15119766	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-7.1405
chr11	95435756	95439304	protein_coding	Ngfr	exon	ENSMUSG00000000120	ProperStrand	31	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.8751
chr9	30972221	30976355	protein_coding	Aplp2	exon	ENSMUSG00000031996	ProperStrand	172	chr17	24665436	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-2.9766
chr17	45803275	45803386	protein_coding	Tmem63b	exon	ENSMUSG00000036026	ProperStrand	93	chr7	117190017	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.5552
chr1	90368768	90368787	DNA	Charlie12	MER1_type	chr1Charlie1290368757	NonProperStrand	1	chr7	29136525	29136571	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-inf
chr16	91658955	91658984	protein_coding	Son	exon	ENSMUSG00000022961	ProperStrand	59	chr15	79908929	79908983	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	3	-12.8209
chr9	26440743	26440759	DNA	MER5A	MER1_type	chr9MER5A26440741	ProperStrand	108	chr9	15118324	15118367	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-2.4258
chr16	8664380	8664444	protein_coding	Carhsp1	exon	ENSMUSG00000008393	ProperStrand	15	chr10	80809668	80809684	protein_coding	Hmg20b	exon	ENSMUSG00000020232	ProperStrand	157	1	-14.2117
chr13	11685404	11685420	protein_coding	Ryr2	exon	ENSMUSG00000021313	ProperStrand	61	chr15	76175555	76175617	protein_coding	Cyc1	exon	ENSMUSG00000022551	ProperStrand	47	2	-inf
chr2	128951768	128951786	protein_coding	Polr1b	exon	ENSMUSG00000027395	ProperStrand	27	chr12	16709316	16709333	protein_coding	Greb1	exon	ENSMUSG00000036523	NonProperStrand	11	1	-18.1588
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr11	116938643	116938749	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-1.2128
chr1	157405525	157405625	protein_coding	Acbd6	utr5	ENSMUSG00000033701	ProperStrand	10	chr9	15118330	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-6.9876
chr5	35435739	35435771	protein_coding	Lrpap1	utr3	ENSMUSG00000029103	ProperStrand	43	chr9	64333076	64333098	protein_coding	Megf11	intron	ENSMUSG00000036466	NonProperStrand	64	1	-13.8567
chr15	102328938	102329038	protein_coding	Pcbp2	utr3	ENSMUSG00000056851	ProperStrand	164	chr1	162965555	162965594	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	11	-20.1568
chr1	153602594	153602610	protein_coding	Edem3	utr5	ENSMUSG00000043019	ProperStrand	84	chr5	92485086	92485189	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	3	-18.1044
chr19	47332983	47333022	protein_coding	Neurl1a	utr3	ENSMUSG00000006435	NonProperStrand	5	chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	1	-15.4321
chr10	122002944	122003034	LINE	L1Md_F2	L1	chr10L1Md_F2122002095	NonProperStrand	23	chr7	110699303	110699383	protein_coding	Olfr613	utr5	ENSMUSG00000078624	ProperStrand	16	1	-17.9842
chr16	30514154	30514171	protein_coding	Tmem44	utr3	ENSMUSG00000022537	ProperStrand	217	chr7	19633798	19633838	protein_coding	Sympk	exon	ENSMUSG00000023118	ProperStrand	43	1	-11.4071
chr3	85942712	85942747	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	chr2	32818841	32818941	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-2.1777
chr5	67784649	67784731	protein_coding	Bend4	utr3	ENSMUSG00000092060	ProperStrand	56	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.4021
chr4	133561647	133561737	protein_coding	Lin28a	utr3	ENSMUSG00000050966	ProperStrand	55	chr10	9571835	9571915	snoRNA	ENSMUSG00000064609_SNORA36	.	ENSMUSG00000064609	ProperStrand	35	8	-19.7537
chr18	35716685	35716765	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	chr12	60235047	60235137	snoRNA	ENSMUSG00000077505_SNORA26	.	ENSMUSG00000077505	ProperStrand	82	1	-1.6739
chr3	129336303	129336338	protein_coding	Elovl6	exon	ENSMUSG00000041220	ProperStrand	59	chr9	120039620	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.3493
chr8	109582337	109582453	protein_coding	Nip7	utr3	ENSMUSG00000031917	ProperStrand	18	chr10	127722453	127722469	protein_coding	Stat2	exon	ENSMUSG00000040033	NonProperStrand	14	1	-19.1501
chr2	157814687	157814774	protein_coding	Tti1	intron	ENSMUSG00000027650	ProperStrand	17	chr4	40773455	40773473	protein_coding	B4galt1	intron	ENSMUSG00000028413	NonProperStrand	1	1	-inf
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr7	51505822	51505909	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	1	-1.6558
chr3	96527940	96527956	protein_coding	Polr3c	exon	ENSMUSG00000028099	NonProperStrand	75	chr15	34370660	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-3.1423
chr11	93766620	93766641	protein_coding	Mbtd1	exon	ENSMUSG00000059474	ProperStrand	36	chr1	88247737	88247802	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	3	-14.0707
chr10	69465311	69467393	protein_coding	Ank3	exon	ENSMUSG00000069601	ProperStrand	76	chr7	118219575	118219611	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-3.7271
chr1	158737276	158737302	protein_coding	Ralgps2	utr3	ENSMUSG00000026594	ProperStrand	16	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-10.4039
chr8	131244241	131244330	protein_coding	Itgb1	exon	ENSMUSG00000025809	ProperStrand	35	chr19	8798521	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-6.2716
chr14	25311308	25312611	protein_coding	Rps24	exon	ENSMUSG00000025290	ProperStrand	110	chr12	105582410	105582426	protein_coding	Serpina3k	exon	ENSMUSG00000058207	ProperStrand	14	1	-15.0764
chr2	90235315	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chrX	34470377	34470394	protein_coding	Sept6	intron	ENSMUSG00000050379	NonProperStrand	2	1	-11.8388
chr6	91183152	91183207	protein_coding	Fbln2	exon	ENSMUSG00000064080	ProperStrand	12	chr2	130102052	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	3	-18.6816
chr11	87614626	87614643	antisense	Gm11505	.	ENSMUSG00000085872	ProperStrand	37	chr2	112203030	112203066	protein_coding	Slc12a6	utr3	ENSMUSG00000027130	ProperStrand	35	1	-15.3814
chr17	24839567	24840252	protein_coding	Tbl3	exon	ENSMUSG00000040688	ProperStrand	42	chr11	69481333	69481380	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.8588
chr8	93517752	93517775	protein_coding	Chd9	intron	ENSMUSG00000056608	NonProperStrand	12	chr4	131908356	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.2270
chr4	119941547	119941564	protein_coding	Foxo6	exon	ENSMUSG00000052135	ProperStrand	31	chr4	131908236	131908334	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-6.6061
mmu-miR-1291	0	16	miRNA	mmu-miR-1291	.	mmu-miR-1291	ProperStrand	103	chr5	130433393	130433411	protein_coding	Vkorc1l1	intron	ENSMUSG00000066735	ProperStrand	8	1	-16.3403
chr7	150717298	150717427	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	chr2	32818842	32818942	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	11	-5.4821
chr13	97428874	97428927	protein_coding	Hmgcr	exon	ENSMUSG00000021670	ProperStrand	56	chr7	118219574	118219655	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	4	-13.7989
chr7	132790221	132790885	protein_coding	Gtf3c1	exon	ENSMUSG00000032777	ProperStrand	161	chr7	52381971	52382010	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	2	-7.9038
chr2	126839951	126845033	protein_coding	Ap4e1	exon	ENSMUSG00000001998	ProperStrand	7	chr8	98269966	98270046	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-9.9218
chr15	76429591	76429758	protein_coding	Cpsf1	exon	ENSMUSG00000034022	ProperStrand	127	chr1	162966001	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-2.2787
chr19	7292000	7292034	protein_coding	Cox8a	utr5	ENSMUSG00000035885	ProperStrand	32	chr4	131866162	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-4.8615
chr12	30437248	30437266	protein_coding	Myt1l	intron	ENSMUSG00000061911	ProperStrand	38	chr4	131865460	131865503	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-4.8759
chr4	97553035	97553052	protein_coding	Nfia	intron	ENSMUSG00000028565	NonProperStrand	74	chr3	88715756	88715954	protein_coding	Msto1	exon	ENSMUSG00000068922	ProperStrand	36	1	-13.9238
chr11	115453775	115453804	protein_coding	Gga3	exon	ENSMUSG00000020740	ProperStrand	44	chr2	157901006	157901097	protein_coding	Rprd1b	utr3	ENSMUSG00000027651	ProperStrand	33	6	-20.9022
chr9	45671342	45671383	protein_coding	Rnf214	intron	ENSMUSG00000042790	ProperStrand	24	chr16	23110911	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.6072
chr2	16621218	16621235	protein_coding	Plxdc2	intron	ENSMUSG00000026748	NonProperStrand	44	chr9	78327868	78328064	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-6.9499
chr15	79820681	79820736	SINE	B1_Mur2	Alu	chr15B1_Mur279820623	NonProperStrand	1	chr4	143748332	143749010	protein_coding	Oog3	exon	ENSMUSG00000050810	NonProperStrand	78	1	-inf
chr7	139834201	139841969	protein_coding	Lhpp	exon	ENSMUSG00000030946	ProperStrand	35	chr16	23111692	23111772	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.8115
chr13	63662415	63662432	protein_coding	Ptch1	intron	ENSMUSG00000021466	ProperStrand	50	chr4	130305549	130305619	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	1	-10.2764
chr11	98878371	98878456	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	chr15	5068440	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	3	-1.5189
chr16	87419198	87419296	snoRNA	ENSMUSG00000065647_SNORA2	.	ENSMUSG00000065647	ProperStrand	123	chr3	123210854	123210899	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.0197
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr8	23816087	23816107	protein_coding-noncoding	Ikbkb	utr3	ENSMUSG00000031537	NonProperStrand	1	1	-inf
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chrX	71142795	71142901	protein_coding	Arhgap4	exon	ENSMUSG00000031389	NonProperStrand	18	1	-10.2298
chr18	82773672	82773688	protein_coding	Zfp236	exon	ENSMUSG00000041258	NonProperStrand	117	chr18	35716812	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.1663
chr2	129998662	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr11	55296270	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-1.4885
chr8	80134317	80134358	protein_coding	Tmem184c	utr5	ENSMUSG00000031617	ProperStrand	5	chr2	26493391	26493487	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-14.3090
chr6	3794653	3794670	SINE	B4A	B4	chr6B4A3794525	NonProperStrand	26	chr7	51505241	51505308	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	1	-9.8371
chr15	84387844	84387946	protein_coding	Ldoc1l	utr5	ENSMUSG00000055745	ProperStrand	4	chr4	131908688	131908745	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-6.2660
chrX	83437137	83437154	protein_coding	Nr0b1	utr5	ENSMUSG00000025056	ProperStrand	37	chr1	162966813	162966843	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-7.2201
chr13	41107975	41108048	protein_coding	Pak1ip1	exon	ENSMUSG00000038683	ProperStrand	49	chr9	120039628	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.6918
chr1	64780224	64780315	protein_coding	Fzd5	utr3	ENSMUSG00000045005	ProperStrand	175	chr4	53873605	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	1	-6.9129
chr6	143007910	143007930	protein_coding	5730419I09Rik	intron	ENSMUSG00000030279	ProperStrand	81	chr16	23110526	23110557	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.9653
chrX	12750354	12750385	protein_coding	Usp9x	utr3	ENSMUSG00000031010	ProperStrand	174	chr19	28346425	28346443	protein_coding	Glis3	intron	ENSMUSG00000091294	NonProperStrand	3	1	-17.6376
chr17	5924640	5924656	protein_coding	Snx9	exon	ENSMUSG00000002365	ProperStrand	6	chr16	91227718	91227735	protein_coding	Olig2	utr3	ENSMUSG00000039830	NonProperStrand	78	1	-17.3079
chr5	33957476	33971510	protein_coding	Fam53a	utr5	ENSMUSG00000037339	ProperStrand	18	chr12	17552949	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	2	-12.0572
chr2	132859948	132860028	DNA	MER5A	MER1_type	chr2MER5A132859926	NonProperStrand	1	chr5	76911934	76912024	LTR	ORR1D1	MaLR	chr5ORR1D176911897	NonProperStrand	1	1	-inf
chr5	74489202	74489564	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr7	117166809	117166857	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	10	-2.7954
chr14	64161612	64161655	protein_coding	Mtmr9	intron	ENSMUSG00000035078	ProperStrand	14	chr11	69483136	69483187	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-8.5983
chr2	25297804	25297833	protein_coding	Abca2	exon	ENSMUSG00000026944	ProperStrand	57	chr9	120038552	120038607	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.1312
chr8	34346833	34346878	protein_coding	Wrn	utr3	ENSMUSG00000031583	ProperStrand	7	chr1	59761644	59761714	snoRNA	ENSMUSG00000089093_Snord11	.	ENSMUSG00000089093	ProperStrand	193	3	-inf
chr3	135233419	135233447	protein_coding	Manba	utr3	ENSMUSG00000028164	ProperStrand	18	chr16	23111754	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.0433
chr5	23830822	23830839	protein_coding	Kcnh2	exon	ENSMUSG00000038319	ProperStrand	242	chr12	17552949	17552995	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-2.5167
chr9	64022665	64026216	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	chr6	115757994	115758119	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	6	-9.6361
chr13	28843546	28843562	lincRNA	2610307P16Rik	intron	ENSMUSG00000085936	ProperStrand	154	chr19	8963087	8963104	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-0.9001
chr11	80285454	80285534	protein_coding	Psmd11	utr3	ENSMUSG00000017428	ProperStrand	34	chr2	153568632	153568722	protein_coding	Mapre1	intron	ENSMUSG00000027479	ProperStrand	19	1	-16.7300
chr4	155123009	155123054	protein_coding	Atad3a	intron	ENSMUSG00000029036	ProperStrand	28	chr3	19528533	19528550	protein_coding	1700064H15Rik	exon	ENSMUSG00000082766	NonProperStrand	78	1	-14.3271
chr6	124909394	124909447	protein_coding	Cops7a	utr3	ENSMUSG00000030127	ProperStrand	16	chr12	88778634	88778697	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-9.1615
chr17	63569502	63569584	protein_coding	Fbxl17	intron	ENSMUSG00000023965	ProperStrand	14	chr3	68889150	68889240	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-6.0690
chr9	108869708	108869724	protein_coding	Col7a1	exon	ENSMUSG00000025650	ProperStrand	33	chr10	126532147	126532163	protein_coding	Os9	utr3	ENSMUSG00000040462	NonProperStrand	28	1	-16.0365
chr1	120580365	120580436	protein_coding	Tfcp2l1	utr3	ENSMUSG00000026380	ProperStrand	158	chrX	34622930	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	15	-19.8554
chr7	25011247	25011347	LTR	ORR1A3	MaLR	chr7ORR1A325011180	ProperStrand	1	chr3	135233989	135234043	protein_coding	Manba	utr3	ENSMUSG00000028164	ProperStrand	18	1	-inf
chr11	97642981	97643079	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	chr9	20693934	20693977	snoRNA	ENSMUSG00000077702_SNORD105	.	ENSMUSG00000077702	ProperStrand	41	7	-inf
chr1	71652477	71652577	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr17	13112553	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	11	-11.9297
chr11	3649570	3649587	protein_coding	Osbp2	intron	ENSMUSG00000020435	ProperStrand	60	chr5	130300419	130300505	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-4.4265
chr2	122559199	122559216	antisense	4930580A09Rik	.	ENSMUSG00000085633	ProperStrand	2	chr18	60847969	60848050	protein_coding	Ndst1	utr3	ENSMUSG00000054008	ProperStrand	38	1	-inf
chr11	48615516	48615596	protein_coding-noncoding	Gnb2l1	utr5	ENSMUSG00000020372	ProperStrand	21	chr7	51505223	51505313	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	4	-20.9065
chr11	70465588	70465676	protein_coding	Pfn1	utr3	ENSMUSG00000018293	ProperStrand	55	chr4	131865910	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.9045
chr9	120039567	120039657	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	chr12	110874223	110874291	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	4	-3.8124
chr11	69730260	69730360	protein_coding	Eif5a	utr3	ENSMUSG00000078812	ProperStrand	164	chr2	26494708	26494759	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.4531
chr7	20513981	20514071	LTR	RLTR11A	ERVK	chr7RLTR11A20513978	NonProperStrand	1	chr7	20514192	20514272	SINE	B1_Mus1	Alu	chr7B1_Mus120514166	NonProperStrand	1	1	-inf
chr6	86337209	86337236	protein_coding	Pcyox1	utr3	ENSMUSG00000029998	ProperStrand	17	chr4	140121137	140121153	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	1	-14.2357
chr14	21320759	21320839	protein_coding	Ppp3cb	exon	ENSMUSG00000021816	ProperStrand	17	chr16	23111691	23111774	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.1536
chr4	125816697	125816797	protein_coding	Stk40	utr3	ENSMUSG00000042608	ProperStrand	32	chr19	8799053	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-7.0802
chr14	15572351	15572371	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr4	131908688	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	6	-3.4817
chrX	71162604	71164844	protein_coding	Naa10	exon	ENSMUSG00000031388	ProperStrand	7	chr17	24857814	24857845	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-6.4221
mmu-miR-6238	3	20	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr2	130101242	130101310	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	2	-6.5744
chr11	103817480	103817500	SINE	B4A	B4	chr11B4A103817343	ProperStrand	2	chr19	32786760	32786811	protein_coding	Atad1	utr5	ENSMUSG00000013662	ProperStrand	14	2	-inf
chr16	17859500	17859590	protein_coding	Dgcr2	exon	ENSMUSG00000003166	ProperStrand	45	chr16	17860568	17860649	protein_coding	Gm20518	intron	ENSMUSG00000092470	ProperStrand	14	3	-inf
chr11	87172190	87172206	protein_coding	Ppm1e	exon	ENSMUSG00000046442	ProperStrand	112	chr11	88154997	88155033	protein_coding	Msi2	utr3	ENSMUSG00000069769	ProperStrand	159	2	-15.9359
chr4	107596083	107596100	protein_coding	Cpt2	utr5	ENSMUSG00000028607	NonProperStrand	106	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.2816
chr1	178754159	178754175	protein_coding	Sdccag8	intron	ENSMUSG00000026504	ProperStrand	54	chr17	35299528	35299561	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-4.9808
chr4	137094462	137095075	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	chr2	79843543	79843559	protein_coding	Pde1a	intron	ENSMUSG00000059173	NonProperStrand	275	1	-5.1057
chr5	28396619	28396637	lincRNA	Gm16719	intron	ENSMUSG00000085535	NonProperStrand	6	chr19	7502143	7502192	protein_coding	Rtn3	utr3	ENSMUSG00000024758	ProperStrand	35	1	-18.4856
chr2	91436228	91436335	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	chr10	110918574	110918691	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	5	-0.9088
chr16	17940403	17940483	LINE	L1_Mur3	L1	chr16L1_Mur317940220	NonProperStrand	1	chr16	17940501	17940591	SINE	B1F2	Alu	chr16B1F217940474	ProperStrand	1	1	-inf
chr10	127521200	127521271	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	chr17	26360445	26360488	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	4	-16.9971
chr11	116084070	116084087	protein_coding	Evpl	exon	ENSMUSG00000034282	ProperStrand	33	chr4	131865866	131865906	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.7641
chr7	129775757	129775857	protein_coding	Prkcb	intron	ENSMUSG00000052889	ProperStrand	16	chr9	15119365	15119426	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-7.7440
chrX	102241584	102241651	lincRNA	5530601H04Rik	intron	ENSMUSG00000087174	ProperStrand	15	chr9	119536351	119539207	protein_coding	Scn10a	exon	ENSMUSG00000034533	ProperStrand	37	1	-17.1125
chr2	90235319	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	72976235	72976253	protein_coding	Klhl26	exon	ENSMUSG00000055707	ProperStrand	3	1	-10.7414
chr18	56899516	56899606	protein_coding	Lmnb1	exon	ENSMUSG00000024590	ProperStrand	176	chr15	34370545	34370625	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-3.1459
chr5	111185095	111185119	protein_coding	Ep400	exon	ENSMUSG00000029505	ProperStrand	176	chr1	162968238	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-4.7145
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr15	103027293	103027320	protein_coding	Cbx5	utr3	ENSMUSG00000009575	ProperStrand	98	1	-6.8197
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr11	63885336	63887052	protein_coding	Cox10	exon	ENSMUSG00000042148	NonProperStrand	187	2	-10.4333
chr11	77871017	77871097	protein_coding	Flot2	exon	ENSMUSG00000061981	ProperStrand	108	chr2	32818852	32818942	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-4.3380
chr5	124566327	124566376	protein_coding	Arl6ip4	utr5	ENSMUSG00000029404	ProperStrand	29	chr16	23110986	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0921
chr5	149317028	149317128	protein_coding	Ubl3	utr3	ENSMUSG00000001687	ProperStrand	6	chr11	107070459	107070475	protein_coding	Pitpnc1	utr3	ENSMUSG00000040430	ProperStrand	46	1	-18.3567
chr17	3201258	3201291	LINE	Lx4A	L1	chr17Lx4A3201052	NonProperStrand	2	chr1	63225589	63225655	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-14.1183
chr11	78081680	78101476	protein_coding	2610507B11Rik	exon	ENSMUSG00000010277	ProperStrand	246	chr16	23111690	23111774	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	6	-3.7472
chr6	119898382	119898458	protein_coding	Wnk1	exon	ENSMUSG00000045962	ProperStrand	221	chrX	34622947	34623037	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-1.0935
chr17	17668129	17668159	protein_coding	Lnpep	exon	ENSMUSG00000023845	ProperStrand	23	chr7	116664841	116664924	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	4	-14.0273
chr8	126343264	126343281	protein_coding	Rab4a	intron	ENSMUSG00000019478	NonProperStrand	15	chr2	26494790	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.7664
chr7	146684406	146684425	protein_coding	Inpp5a	intron	ENSMUSG00000025477	ProperStrand	166	chr11	106362556	106362637	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-5.4000
chr3	113827103	113827119	protein_coding	Col11a1	utr3	ENSMUSG00000027966	NonProperStrand	139	chr6	87931024	87931074	protein_coding	H1fx	exon	ENSMUSG00000044927	ProperStrand	13	1	-14.7381
chr7	117189864	117189954	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr12	92811909	92811930	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	1	-1.8620
chr5	74489216	74489306	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr8	12650159	12650184	protein_coding	Tubgcp3	exon	ENSMUSG00000000759	ProperStrand	16	3	-18.6840
chr6	71812473	71813200	protein_coding	Immt	exon	ENSMUSG00000052337	ProperStrand	48	chr4	131865884	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.1244
chr10	126705500	126705542	protein_coding	Dctn2	intron	ENSMUSG00000025410	ProperStrand	42	chr10	86221857	86221873	protein_coding	BC030307	exon	ENSMUSG00000044937	ProperStrand	77	1	-13.5339
chr4	131908377	131908461	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr9	39358287	39358304	protein_coding	Olfr958	exon	ENSMUSG00000050853	NonProperStrand	266	1	-4.3549
chr6	39284967	39285006	protein_coding	Slc37a3	utr3	ENSMUSG00000029924	ProperStrand	24	chr5	113343326	113343416	protein_coding	Adrbk2	utr3	ENSMUSG00000042249	ProperStrand	56	10	-19.9502
chr1	66221974	66221990	protein_coding	Mtap2	utr5	ENSMUSG00000015222	NonProperStrand	18	chr17	39985356	39985403	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-8.3455
chr15	103024534	103024614	protein_coding	Cbx5	utr3	ENSMUSG00000009575	ProperStrand	98	chr4	86232357	86232447	snoRNA	ENSMUSG00000088958_Scarna8	.	ENSMUSG00000088958	ProperStrand	366	1	-8.7078
chr15	73135665	73135724	protein_coding	Ptk2	intron	ENSMUSG00000022607	ProperStrand	31	chr9	64023680	64023747	snoRNA	ENSMUSG00000064918_SNORD18	.	ENSMUSG00000064918	ProperStrand	370	1	-11.0020
chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	chr1	128504598	128504615	protein_coding	Nckap5	intron	ENSMUSG00000049690	NonProperStrand	22	1	-12.6521
chr2	28695610	28695626	protein_coding	Gtf3c4	utr5	ENSMUSG00000035666	NonProperStrand	16	chr4	131908838	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.4136
chr17	86569826	86569842	protein_coding	Prkce	intron	ENSMUSG00000045038	NonProperStrand	24	chr17	39985622	39985743	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-7.7605
chr3	136106632	136106722	LTR	MT2_Mm	ERVL	chr3MT2_Mm136106548	ProperStrand	1	chr12	29123148	29123228	protein_coding	Dcdc2c	utr3	ENSMUSG00000020633	ProperStrand	6	1	-inf
chr6	5110051	5110141	protein_coding	Ppp1r9a	utr3	ENSMUSG00000032827	ProperStrand	50	chr11	69481383	69481463	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.5340
chr4	21737940	21737960	protein_coding	Usp45	exon	ENSMUSG00000040455	ProperStrand	40	chr4	129305919	129306003	protein_coding	Txlna	utr3	ENSMUSG00000053841	ProperStrand	37	1	-15.1130
chr15	10504979	10504995	protein_coding	Rai14	exon	ENSMUSG00000022246	ProperStrand	180	chr2	27375920	27376157	protein_coding	Wdr5	exon	ENSMUSG00000026917	ProperStrand	81	1	-10.5060
chr2	167341381	167341400	protein_coding	Rnf114	utr3	ENSMUSG00000006418	ProperStrand	18	chr11	97643007	97643092	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-7.8531
chr16	37882679	37882731	protein_coding	Lrrc58	utr3	ENSMUSG00000034158	ProperStrand	23	chr5	143194546	143194727	protein_coding	Slc29a4	exon	ENSMUSG00000050822	ProperStrand	14	1	-18.4068
chr5	143533606	143533706	protein_coding	Tnrc18	exon	ENSMUSG00000039477	ProperStrand	39	chr4	131908689	131908744	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.8599
chr17	35089181	35089207	processed_transcript	1110038B12Rik	.	ENSMUSG00000092203	ProperStrand	126	chr7	119934402	119934480	protein_coding	Tead1	intron	ENSMUSG00000055320	ProperStrand	217	2	-14.6387
chrX	35833676	35833693	lincRNA	Gm7598	exon	ENSMUSG00000087390	ProperStrand	12	chr6	119987717	119987738	protein_coding	Wnk1	utr5	ENSMUSG00000045962	ProperStrand	221	1	-13.9862
chr2	121282863	121282879	protein_coding	2310003F16Rik	exon	ENSMUSG00000027245	ProperStrand	40	chr18	35413271	35413330	protein_coding	Ctnna1	exon	ENSMUSG00000037815	ProperStrand	115	1	-12.8251
chr4	15925515	15925630	protein_coding	Osgin2	exon	ENSMUSG00000041153	ProperStrand	4	chr16	23110555	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-7.8518
chr4	131456849	131456942	protein_coding	Srsf4	exon	ENSMUSG00000028911	ProperStrand	101	chr18	35714217	35714258	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-2.5177
chr7	17006849	17007620	protein_coding	Zc3h4	exon	ENSMUSG00000059273	ProperStrand	95	chr4	131866159	131866239	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-2.8334
chr1	120528904	120528944	protein_coding	Tfcp2l1	exon	ENSMUSG00000026380	ProperStrand	158	chr2	144087324	144087379	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-4.6579
chr10	61707069	61707159	LTR	RMER19C	ERVK	chr10RMER19C61706562	NonProperStrand	1	chr10	61707203	61707293	SINE	B4A	B4	chr10B4A61707196	NonProperStrand	1	1	-inf
chr5	104735049	104738296	protein_coding	Ibsp	exon	ENSMUSG00000029306	ProperStrand	15	chr19	8963030	8963130	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.8348
chr12	29405939	29405977	protein_coding	Ttc15	exon	ENSMUSG00000020628	ProperStrand	15	chr11	35358549	35358566	protein_coding	Slit3	intron	ENSMUSG00000056427	NonProperStrand	45	1	-16.7241
chr12	88778724	88778776	protein_coding	Alkbh1	intron	ENSMUSG00000079036	ProperStrand	70	chr2	130101256	130101310	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	2	-10.1884
chr15	80840938	80840973	protein_coding	Sgsm3	exon	ENSMUSG00000042303	ProperStrand	11	chr14	76247715	76247805	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	3	-17.1538
chr1	155542888	155542905	protein_coding	Rgs8	utr3	ENSMUSG00000042671	NonProperStrand	12	chr16	23110852	23110942	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-6.8317
chr9	70255743	70255760	protein_coding	Ccnb2	exon	ENSMUSG00000032218	ProperStrand	54	chr9	113650926	113670731	protein_coding	Clasp2	exon	ENSMUSG00000033392	ProperStrand	30	1	-14.9276
chr13	81182497	81182514	lincRNA	9330111N05Rik	intron	ENSMUSG00000085266	ProperStrand	2	chr5	145532196	145532245	protein_coding	Trrap	intron	ENSMUSG00000045482	ProperStrand	399	1	-16.9720
chr5	123997135	124008636	protein_coding	Vps33a	exon	ENSMUSG00000029434	ProperStrand	16	chr15	98356830	98356913	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	1	-10.4304
chr3	96528187	96528287	snoRNA	ENSMUSG00000065669_SNORA5	.	ENSMUSG00000065669	ProperStrand	180	chr11	69483136	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	12	-19.5478
chr2	145077957	145209256	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	chr10	39978338	39978485	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	9	-12.0339
chr5	122304435	122304453	protein_coding	Fam109a	utr3	ENSMUSG00000044134	ProperStrand	12	chr18	33954900	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-6.6526
chr2	90235297	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	136225761	136225778	protein_coding	Ppfia4	exon	ENSMUSG00000026458	ProperStrand	45	1	-5.0171
chr9	65127126	65127142	protein_coding	Cilp	exon	ENSMUSG00000042254	ProperStrand	212	chr19	8799581	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-4.3123
chr9	65756911	65756928	protein_coding	Csnk1g1	utr5	ENSMUSG00000032384	ProperStrand	31	chr4	56910496	56910548	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-7.4215
chr5	24198685	24198745	protein_coding	Nub1	exon	ENSMUSG00000028954	ProperStrand	32	chr13	41922627	41922644	protein_coding	9530008L14Rik	intron	ENSMUSG00000058022	NonProperStrand	22	1	-16.6073
chr4	118954786	118954845	protein_coding	Ybx1	exon	ENSMUSG00000028639	ProperStrand	171	chr6	118038901	118038918	protein_coding	Rasgef1a	intron	ENSMUSG00000030134	NonProperStrand	7	1	-15.6604
chr15	30817030	30835464	protein_coding	Ctnnd2	exon	ENSMUSG00000022240	ProperStrand	24	chr9	120039533	120039576	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-8.3762
chr10	61128179	61129690	protein_coding	Ppa1	exon	ENSMUSG00000020089	ProperStrand	30	chr4	131865865	131865955	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.9337
chr11	106123906	106123934	protein_coding	Psmc5	exon	ENSMUSG00000020708	ProperStrand	51	chr4	131865929	131865988	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-5.5951
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr8	46112120	46112136	protein_coding	Fat1	exon	ENSMUSG00000070047	ProperStrand	306	1	-2.8362
chr4	149355531	149355631	protein_coding	H6pd	utr3	ENSMUSG00000028980	ProperStrand	14	chr10	23505152	23505179	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.6795
chr5	67068100	67068151	protein_coding	Uchl1	intron	ENSMUSG00000029223	ProperStrand	29	chr2	150095904	150095920	protein_coding	Gm14124	utr3	ENSMUSG00000079008	NonProperStrand	18	1	-17.0961
chr9	64333076	64333098	protein_coding	Megf11	intron	ENSMUSG00000036466	NonProperStrand	64	chr7	116663633	116663694	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.4017
chr2	28323789	28323807	protein_coding	Mrps2	exon	ENSMUSG00000035772	ProperStrand	8	chr1	89681355	89681396	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-9.5317
chr6	82686598	82686695	protein_coding	Hk2	exon	ENSMUSG00000000628	ProperStrand	88	chr15	79913288	79913336	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.8988
chr4	131865497	131865522	lincRNA	Snhg12	intron	ENSMUSG00000086290	ProperStrand	178	chr4	131908685	131908785	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-1.5181
chr11	47037156	47037174	protein_coding	Sgcd	intron	ENSMUSG00000020354	ProperStrand	24	chr4	131908236	131908355	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.9196
chr8	72635943	72635961	protein_coding	Ncan	exon	ENSMUSG00000002341	ProperStrand	8	chr18	74785354	74786835	protein_coding	Myo5b	exon	ENSMUSG00000025885	ProperStrand	28	1	-18.2008
chr9	63868722	63868738	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	chr8	108350999	108351083	protein_coding	Ranbp10	exon	ENSMUSG00000037415	ProperStrand	13	1	-11.6985
chr11	4464616	4464706	protein_coding	Mtmr3	intron	ENSMUSG00000034354	NonProperStrand	3	chr11	4464434	4464524	pseudogene	Gm11960	.	ENSMUSG00000081974	ProperStrand	1	1	-inf
chr9	78023110	78023210	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr3	88497853	88497981	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	3	-2.8247
chr2	4974190	4974207	protein_coding	Optn	exon	ENSMUSG00000026672	ProperStrand	451	chr14	31827492	31827516	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-3.0878
chr17	13955176	13955222	protein_coding	Mllt4	exon	ENSMUSG00000068036	ProperStrand	156	chr3	85942714	85942779	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	2	-12.4715
chr11	69481387	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	chr8	113366286	113366354	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	4	-2.2087
chr17	75047490	75047529	protein_coding	Birc6	exon	ENSMUSG00000024073	ProperStrand	110	chr5	74489595	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-2.6837
chr4	147933671	147933771	protein_coding	Exosc10	exon	ENSMUSG00000017264	ProperStrand	20	chr10	23505152	23505178	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	8	-21.0199
chr8	109188221	109188299	protein_coding	Cdh1	exon	ENSMUSG00000000303	ProperStrand	283	chr11	101466256	101466351	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	5	-19.8958
chr8	123102433	123102513	protein_coding	Gse1	utr3	ENSMUSG00000031822	ProperStrand	97	chr9	120039567	120039657	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.4704
chr17	38290745	38290764	LTR	MurERV4-int	ERVK	chr17MurERV4-int38290059	ProperStrand	21	chr8	77635906	77635923	protein_coding	Mcm5	intron	ENSMUSG00000005410	ProperStrand	199	1	-13.0357
chr5	143665536	143665573	protein_coding	Actb	exon	ENSMUSG00000029580	ProperStrand	446	chr14	52799944	52800787	protein_coding	Supt16h	exon	ENSMUSG00000035726	ProperStrand	193	1	-6.9684
chr16	17640376	17641069	protein_coding	Smpd4	exon	ENSMUSG00000005899	ProperStrand	33	chr7	117190025	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	6	-21.4351
chr9	5022779	5022870	LINE	Lx2A	L1	chr9Lx2A5022182	ProperStrand	1	chr9	24364975	24365055	protein_coding	Dpy19l2	intron	ENSMUSG00000085576	ProperStrand	3	1	-inf
chr12	17552961	17553035	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr7	52381719	52381779	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	2	-1.0838
chr9	15119719	15119766	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	NonProperStrand	21	chr16	23111726	23111826	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	NonProperStrand	47	3	-inf
chr17	30772308	30772324	protein_coding	Dnahc8	utr5	ENSMUSG00000033826	ProperStrand	246	chr13	12495482	12495502	protein_coding	Heatr1	exon	ENSMUSG00000050244	ProperStrand	74	1	-10.0629
chr2	164652196	164652262	protein_coding	Zswim1	utr3	ENSMUSG00000017764	ProperStrand	68	chr11	116938615	116938705	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-5.9128
chr10	127875284	127875300	protein_coding	Rnf41	exon	ENSMUSG00000025373	NonProperStrand	5	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-13.7543
chr12	101759078	101759095	Low_complexity	GC_rich	Low_complexity	chr12GC_rich101758901	ProperStrand	34	chr16	37777391	37777408	protein_coding	Fstl1	exon	ENSMUSG00000022816	ProperStrand	179	1	-12.2668
chr5	140783575	140783662	protein_coding	Mad1l1	exon	ENSMUSG00000029554	ProperStrand	69	chr7	116663634	116663724	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.2753
chr2	4974190	4974207	protein_coding	Optn	exon	ENSMUSG00000026672	ProperStrand	451	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-4.6283
chr16	38369597	38369614	protein_coding	Popdc2	exon	ENSMUSG00000022803	ProperStrand	19	chr4	122968621	122968721	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	6	-inf
chr1	94841660	94841714	protein_coding	Capn10	exon	ENSMUSG00000026270	ProperStrand	32	chr7	116663633	116663733	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-6.1987
chr2	90235293	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	3482806	3482824	SINE	B4A	B4	chr2B4A3482726	ProperStrand	1	1	-inf
chr5	72594730	72594749	lincRNA	Atp10d	exon	ENSMUSG00000046808	ProperStrand	13	chr18	74938051	74938128	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	ProperStrand	1022	3	-inf
chr14	21275479	21275580	protein_coding	Anxa7	utr3	ENSMUSG00000021814	ProperStrand	20	chr4	131908687	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-7.8128
chrX	71589886	71589904	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr7	83010767	83010784	protein_coding	Klhl25	exon	ENSMUSG00000055652	ProperStrand	4	1	-15.8373
chr2	34631324	34631377	protein_coding	Hspa5	exon	ENSMUSG00000026864	ProperStrand	181	chr3	123210882	123210972	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	6	-5.8511
chr11	24374945	24374965	lincRNA	Gm12068	intron	ENSMUSG00000087085	NonProperStrand	5	chr9	67768740	67768795	protein_coding	Vps13c	exon	ENSMUSG00000035284	ProperStrand	69	1	-17.8959
chr7	29136525	29136554	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	chr5	92485086	92485217	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	6	-1.4032
chr11	6428034	6428170	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr4	131865381	131865509	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	38	-1.1717
chr8	12757419	12757437	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	4	-1.9875
chr4	43505674	43505798	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr18	82662186	82662202	protein_coding	Mbp	intron	ENSMUSG00000041607	NonProperStrand	185	1	-1.2550
chr8	87370177	87370203	protein_coding	Calr	exon	ENSMUSG00000003814	ProperStrand	232	chr2	158185574	158185653	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-3.8758
chr1	71642335	71643913	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr6	125136401	125136452	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	1	-1.4802
chr4	117884437	117884472	protein_coding	Ptprf	exon	ENSMUSG00000033295	ProperStrand	337	chr6	129528271	129528289	protein_coding	Klre1	utr5	ENSMUSG00000050241	NonProperStrand	20	1	-12.0827
chr9	15130706	15130786	snoRNA	ENSMUSG00000077506_Scarna9	.	ENSMUSG00000077506	ProperStrand	148	chr3	68889053	68889145	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	3	-4.8942
chr9	120039533	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	chr7	52382231	52382308	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	4	-1.1684
chr2	152747737	152747760	protein_coding	Mylk2	intron	ENSMUSG00000027470	NonProperStrand	3	chr15	34370545	34370657	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-16.3344
chr5	116011248	116011356	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	chr8	73223377	73223393	protein_coding	Jund	exon	ENSMUSG00000071076	ProperStrand	50	1	-10.5157
chr15	100358955	100358972	protein_coding	Tfcp2	exon	ENSMUSG00000009733	NonProperStrand	77	chrX	35893214	35893266	protein_coding	Cul4b	exon	ENSMUSG00000031095	ProperStrand	31	1	-14.1427
chr9	63868722	63868739	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	chr8	32260340	32260424	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-0.7658
chr14	67634957	67635007	protein_coding	Ppp2r2a	utr3	ENSMUSG00000022052	ProperStrand	45	chr11	69481384	69481474	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.7296
chr11	22896036	22896369	protein_coding	Cct4	exon	ENSMUSG00000007739	ProperStrand	81	chr3	123210854	123210931	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-2.9714
chr2	157119950	157120991	protein_coding	Rpn2	exon	ENSMUSG00000027642	ProperStrand	363	chr9	78327834	78327894	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-2.9226
chr3	152450535	152450629	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	chr11	69483136	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	66	-20.6843
chr4	140508217	140508278	protein_coding	Padi2	utr3	ENSMUSG00000028927	ProperStrand	24	chr9	120039571	120039661	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	9	-inf
chr2	32818850	32818951	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	chr5	130295414	130295513	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	28	-23.3977
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr4	118805850	118806005	protein_coding	Slc2a1	exon	ENSMUSG00000028645	ProperStrand	361	1	-3.4711
chr5	102370468	102370529	protein_coding	Wdfy3	exon	ENSMUSG00000043940	ProperStrand	45	chr17	35089181	35089210	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-6.0505
chr11	80196945	80199411	protein_coding	Zfp207	utr5	ENSMUSG00000017421	ProperStrand	21	chr4	131908705	131908795	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-7.6158
chr2	165122372	165122452	protein_coding	Elmo2	exon	ENSMUSG00000017670	ProperStrand	14	chr2	49087252	49087342	protein_coding	Mbd5	utr5	ENSMUSG00000036792	ProperStrand	15	1	-19.4319
chr1	155089125	155089786	protein_coding	Lamc1	exon	ENSMUSG00000026478	ProperStrand	239	chr2	70927899	70927915	protein_coding	Dcaf17	exon	ENSMUSG00000041966	NonProperStrand	89	2	-15.4145
chr5	121655016	121655156	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	chr12	106269284	106269519	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	47	-11.0944
chr8	27109922	27109985	protein_coding	Fnta	exon	ENSMUSG00000015994	ProperStrand	2	chr16	23110911	23111001	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr10	79857902	79858248	protein_coding	Mbd3	exon	ENSMUSG00000035478	ProperStrand	27	chr15	98350146	98350179	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	2	-10.2868
chr2	119761097	119761197	protein_coding	Mga	exon	ENSMUSG00000033943	ProperStrand	180	chr9	15119711	15119735	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-0.9647
mmu-miR-6240	1	25	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr12	102942689	102942706	protein_coding	Tc2n	intron	ENSMUSG00000021187	ProperStrand	32	1	-7.1521
chr17	34710007	34710097	protein_coding	Notch4	intron	ENSMUSG00000015468	NonProperStrand	3	chr12	83073838	83073928	protein_coding	Pcnx	intron	ENSMUSG00000021140	ProperStrand	32	1	-23.9570
chr9	119149999	119150035	protein_coding	Oxsr1	utr3	ENSMUSG00000036737	ProperStrand	33	chr18	84438699	84438715	protein_coding	Zfp407	intron	ENSMUSG00000048410	NonProperStrand	16	1	-17.0731
chr2	75499773	75499807	protein_coding	Hnrnpa3	exon	ENSMUSG00000059005	ProperStrand	289	chr7	148634760	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-2.5249
chr9	42324004	42324094	SINE	B3	B2	chr9B342323958	ProperStrand	1	chr9	42324141	42324231	SINE	B4	B4	chr9B442324151	ProperStrand	1	1	-inf
chr6	39534200	39534261	protein_coding	Adck2	intron	ENSMUSG00000046947	ProperStrand	6	chr5	130300436	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	4	-19.8388
chr9	15118245	15118312	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	NonProperStrand	11	chr7	52381722	52381761	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	NonProperStrand	2	1	-inf
chr7	52382168	52382258	protein_coding-noncoding	Rpl13a	utr3	ENSMUSG00000074129	NonProperStrand	2	chr8	126077957	126077989	protein_coding	Gm20388	intron	ENSMUSG00000092329	ProperStrand	295	2	-inf
chr11	30038818	30038849	protein_coding	Spnb2	exon	ENSMUSG00000020315	ProperStrand	103	chr11	64861786	64861825	protein_coding	Arhgap44	intron	ENSMUSG00000033389	ProperStrand	28	4	-20.6707
chr9	15119288	15119378	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	chr4	116828378	116828429	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-0.9358
chr9	32606071	32606161	LTR	MTA_Mm	MaLR	chr9MTA_Mm32606049	ProperStrand	1	chr3	40506584	40506674	protein_coding	Intu	utr3	ENSMUSG00000060798	NonProperStrand	17	1	-inf
chr19	6277350	6277370	protein_coding	Ehd1	exon	ENSMUSG00000024772	ProperStrand	30	chr11	69481332	69481401	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-4.4996
chr2	118931004	118931028	protein_coding	Casc5	utr3	ENSMUSG00000027326	ProperStrand	30	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.5795
chr4	81748400	81748420	lincRNA	Gm5860	exon	ENSMUSG00000085022	ProperStrand	9	chr4	131908689	131908722	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-7.7011
chr1	164407981	164408071	protein_coding	Dnm3	utr5	ENSMUSG00000040265	ProperStrand	11	chr1	164408124	164408214	protein_coding	Gm10176	utr3	ENSMUSG00000066752	NonProperStrand	1	1	-inf
chr18	10523299	10523316	protein_coding	Greb1l	exon	ENSMUSG00000042942	NonProperStrand	11	chr18	35716730	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-5.3336
chr1	166367786	166367829	protein_coding	Atp1b1	utr3	ENSMUSG00000026576	ProperStrand	67	chr2	166890801	166890843	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	1	-10.1595
chr15	79826727	79826817	protein_coding	Pdgfb	utr3	ENSMUSG00000000489	ProperStrand	11	chr9	15119297	15119377	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-8.5178
chr2	168582207	168582297	protein_coding	Sall4	exon	ENSMUSG00000027547	ProperStrand	82	chr7	116664794	116664874	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.0275
chr12	60141326	60141509	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	chr3	68889087	68889242	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	11	-2.2201
chr8	90685627	90685668	protein_coding-noncoding	Heatr3	utr5	ENSMUSG00000031657	ProperStrand	1	chr8	98269984	98270084	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-inf
chr2	26494830	26494865	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr1	93182012	93182028	protein_coding	Ube2f	utr3	ENSMUSG00000034343	NonProperStrand	22	1	-8.2032
chr9	15357808	15357898	LINE	L1MD1	L1	chr9L1MD115357812	NonProperStrand	1	chr9	15357654	15357734	SINE	B3	B2	chr9B315357544	NonProperStrand	1	1	-inf
chr2	79132657	79132674	protein_coding-noncoding	Itga4	utr5	ENSMUSG00000027009	NonProperStrand	118	chr17	32274785	32276102	protein_coding	Notch3	exon	ENSMUSG00000038146	ProperStrand	181	1	-9.7409
chr2	128675808	128675844	protein_coding-noncoding	Tmem87b	utr5	ENSMUSG00000014353	ProperStrand	2	chr17	24665421	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	2	-inf
chr5	115940331	115940405	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	chr7	148634776	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	9	-9.8422
chrX	99382720	99382746	protein_coding	Rps4x	exon	ENSMUSG00000031320	ProperStrand	139	chr7	150717298	150717350	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	2	-6.5569
chr15	79751831	79753954	protein_coding	Cbx7	exon	ENSMUSG00000053411	ProperStrand	62	chr7	117166748	117166828	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-4.7528
chr17	45706731	45707243	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr11	67120023	67120100	protein_coding	Myh8	intron	ENSMUSG00000055775	NonProperStrand	4	1	-12.3862
chr6	143129168	143155094	protein_coding	Etnk1	utr3	ENSMUSG00000030275	ProperStrand	61	chr16	23110909	23111010	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-3.2477
chr8	66704297	66704313	LTR	MTD	MaLR	chr8MTD66704270	ProperStrand	12	chr11	62416577	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-8.3961
chr2	84886581	84886804	protein_coding	Ssrp1	exon	ENSMUSG00000027067	ProperStrand	118	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-7.2446
chr12	114378529	114378546	protein_coding	Crip2	utr5	ENSMUSG00000006356	ProperStrand	30	chr7	52714522	52714921	protein_coding	Ftl1	exon	ENSMUSG00000050708	ProperStrand	807	3	-20.4661
chr17	68250818	68250836	protein_coding	Arhgap28	exon	ENSMUSG00000024043	NonProperStrand	7	chr4	122970392	122970466	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-11.8284
chr15	96245331	96245515	protein_coding	Scaf11	exon	ENSMUSG00000033228	ProperStrand	37	chr19	8799025	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-6.7899
chr13	91064224	91064255	protein_coding	Rps23	exon	ENSMUSG00000049517	ProperStrand	34	chr19	8963051	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.2720
chr9	61766745	61767421	protein_coding	Kif23	exon	ENSMUSG00000032254	ProperStrand	41	chr15	101919124	101919321	protein_coding	Eif4b	exon	ENSMUSG00000058655	ProperStrand	484	3	-20.6605
chr8	108373566	108373583	protein_coding	Cenpt	exon	ENSMUSG00000036672	ProperStrand	13	chr7	116663682	116663709	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-5.3924
chr14	55819422	55819512	LINE	Lx9	L1	chr14Lx955819405	NonProperStrand	1	chr14	55819537	55819617	SINE	B1F1	Alu	chr14B1F155819499	ProperStrand	1	1	-inf
chr9	59170556	59177216	protein_coding	Bbs4	intron	ENSMUSG00000025235	NonProperStrand	17	chr4	131908235	131908345	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-6.1110
chr6	67217402	67221293	protein_coding	Serbp1	exon	ENSMUSG00000036371	ProperStrand	261	chr7	117189948	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	24	-inf
chr3	101395332	101395377	protein_coding	Atp1a1	exon	ENSMUSG00000033161	ProperStrand	316	chr11	68887040	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-1.3231
chr19	10369999	10370079	protein_coding	Dagla	intron	ENSMUSG00000035735	ProperStrand	23	chr6	71832550	71832640	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-7.5201
mmu-miR-6240	3	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr6	92801245	92801263	protein_coding	Adamts9	intron	ENSMUSG00000030022	ProperStrand	27	1	-7.4937
chr12	88789184	88789274	protein_coding	1810035L17Rik	intron	ENSMUSG00000021040	NonProperStrand	1	chrX	156201352	156201442	protein_coding	Sh3kbp1	intron	ENSMUSG00000040990	ProperStrand	67	1	-inf
chr8	59961707	59961758	protein_coding	Sap30	utr3	ENSMUSG00000031609	ProperStrand	16	chr16	23110895	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-3.6512
chr6	87795178	87795278	protein_coding	Cnbp	exon	ENSMUSG00000030057	ProperStrand	46	chr2	130102006	130102055	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-5.8775
chr12	99497602	99497618	protein_coding	Galc	utr5	ENSMUSG00000021003	NonProperStrand	65	chr2	29924558	29924852	protein_coding	Set	exon	ENSMUSG00000054766	ProperStrand	167	1	-11.0983
chr10	79086780	79086797	protein_coding	Shc2	intron	ENSMUSG00000020312	NonProperStrand	5	chr19	8963027	8963085	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-7.1260
chr7	20224311	20224359	protein_coding	Clptm1	exon	ENSMUSG00000002981	ProperStrand	109	chr4	116862613	116862664	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	3	-17.0840
chr11	97889665	97889693	protein_coding	Rpl19	exon	ENSMUSG00000017404	ProperStrand	120	chr18	12172461	12172477	protein_coding	6030446N20Rik	intron	ENSMUSG00000049411	ProperStrand	235	1	-9.1859
chr2	26494699	26494761	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-2.5055
chr12	52865109	52865131	protein_coding	Hectd1	exon	ENSMUSG00000035247	ProperStrand	41	chr9	15119643	15119689	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.3086
chr11	4667430	4667456	protein_coding	Nf2	utr3	ENSMUSG00000009073	ProperStrand	72	chr7	116664819	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	4	-8.3120
chr17	46884450	46884466	protein_coding	Cnpy3	exon	ENSMUSG00000023973	ProperStrand	85	chr19	6376883	6376906	protein_coding	Sf1	utr3	ENSMUSG00000024949	ProperStrand	251	1	-9.7447
chr1	33828651	33828669	protein_coding	Zfp451	intron	ENSMUSG00000042197	NonProperStrand	393	chr1	162965530	162965588	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-1.9476
chr13	51743579	51743658	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	7	-1.1257
chr13	89134616	89134696	protein_coding	Edil3	intron	ENSMUSG00000034488	NonProperStrand	12	chr13	89111319	89111409	protein_coding	Edil3	intron	ENSMUSG00000034488	ProperStrand	4	1	-20.4237
chrX	101017112	101017128	protein_coding	Slc16a2	exon	ENSMUSG00000033965	ProperStrand	35	chr2	130101241	130101310	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-7.6664
chr19	34807169	34807259	protein_coding	Slc16a12	intron	ENSMUSG00000009378	NonProperStrand	5	chr14	44125840	44125920	protein_coding	Gm5799	intron	ENSMUSG00000091477	NonProperStrand	1	1	-inf
chr9	113885192	113885236	protein_coding	Ubp1	utr3	ENSMUSG00000009741	ProperStrand	29	chr8	87574143	87574178	snoRNA	ENSMUSG00000077527_SNORD41	.	ENSMUSG00000077527	ProperStrand	29	1	-16.2832
chr5	125528708	125528753	protein_coding	Ncor2	exon	ENSMUSG00000029478	ProperStrand	377	chr12	104663677	104663695	protein_coding	Ddx24	intron	ENSMUSG00000041645	NonProperStrand	23	1	-11.5720
chr15	34767495	34767512	protein_coding	Kcns2	utr5	ENSMUSG00000050963	NonProperStrand	1	chr8	74446729	74446745	protein_coding	Zfp617	intron	ENSMUSG00000066880	NonProperStrand	208	1	-inf
chr13	99629863	99630615	protein_coding	Tnpo1	exon	ENSMUSG00000009470	ProperStrand	56	chr4	131447214	131448000	protein_coding	Srsf4	exon	ENSMUSG00000028911	ProperStrand	101	3	-19.3171
chr9	36731054	36731072	protein_coding	Pknox2	intron	ENSMUSG00000035934	NonProperStrand	11	chr4	131866610	131866649	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	1	-12.5688
chr13	55656244	55656270	protein_coding	Fam193b	intron	ENSMUSG00000021495	ProperStrand	51	chr8	77742558	77742574	protein_coding	Rasd2	exon	ENSMUSG00000034472	NonProperStrand	237	1	-10.8861
chr17	80659603	80659703	protein_coding	Dhx57	exon	ENSMUSG00000035051	ProperStrand	20	chr7	52381973	52382009	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-8.9213
chr16	14230762	14230779	protein_coding	Myh11	intron	ENSMUSG00000018830	ProperStrand	5	chr4	131865855	131865982	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-6.5022
chr12	50485931	50485947	protein_coding	Foxg1	exon	ENSMUSG00000020950	NonProperStrand	26	chr15	98350146	98350190	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	2	-10.4029
chr11	97793560	97793576	protein_coding	Plxdc1	exon	ENSMUSG00000017417	ProperStrand	20	chr1	132742958	132742975	protein_coding	Pigr	exon	ENSMUSG00000026417	NonProperStrand	48	1	-15.9845
chr11	102294588	102294607	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr11	55296251	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	6	-12.6283
chr8	91554773	91554901	protein_coding	Sall1	exon	ENSMUSG00000031665	ProperStrand	96	chr2	41199972	41199989	protein_coding	Lrp1b	exon	ENSMUSG00000049252	ProperStrand	376	3	-18.5210
chr14	56159296	56159312	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	chr6	29127485	29127502	protein_coding	Prrt4	exon	ENSMUSG00000079654	ProperStrand	23	1	-12.8815
chr9	51893395	51894454	protein_coding	Rdx	exon	ENSMUSG00000032050	ProperStrand	60	chr16	23111721	23111801	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.9032
chr18	65304408	65304426	protein_coding	Nedd4l	intron	ENSMUSG00000024589	ProperStrand	44	chr11	106362304	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-6.4550
chr11	55033968	55035510	protein_coding	Slc36a1	exon	ENSMUSG00000020261	ProperStrand	11	chr16	23110828	23110874	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.6241
chr1	173433204	173433256	protein_coding	B930036N10Rik	utr3	ENSMUSG00000091993	ProperStrand	150	chr12	92811925	92812015	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	3	-15.2982
chr11	75572897	75578172	protein_coding	Ywhae	exon	ENSMUSG00000020849	ProperStrand	176	chr4	116827118	116827164	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-4.9316
chr4	117752153	117752172	protein_coding	St3gal3	intron	ENSMUSG00000028538	ProperStrand	8	chr7	29136525	29136574	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-6.2203
chr7	118215532	118215558	protein_coding	Eif4g2	utr3	ENSMUSG00000005610	ProperStrand	134	chr12	55835611	55835701	snRNA	ENSMUSG00000075960_U1	.	ENSMUSG00000075960	ProperStrand	210	1	-9.1898
chr11	76800116	76800161	protein_coding	Blmh	utr3	ENSMUSG00000020840	ProperStrand	70	chr10	39978336	39978426	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	11	-inf
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr17	46444240	46446994	protein_coding	Abcc10	exon	ENSMUSG00000032842	NonProperStrand	5	1	-13.8775
chr2	3336354	3336371	protein_coding	Meig1	utr5	ENSMUSG00000026650	ProperStrand	18	chr2	166890502	166890581	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-9.9904
chr7	87370143	87370194	protein_coding	Sema4b	exon	ENSMUSG00000030539	ProperStrand	54	chr9	110353356	110357868	protein_coding	Klhl18	exon	ENSMUSG00000054792	NonProperStrand	6	1	-18.0672
chr12	30580163	30580179	protein_coding	Myt1l	exon	ENSMUSG00000061911	NonProperStrand	19	chr11	62416951	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-8.3479
chr5	124765894	124766096	protein_coding	Mphosph9	exon	ENSMUSG00000038126	ProperStrand	23	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-7.7555
chr17	66273304	66273322	protein_coding	Twsg1	utr3	ENSMUSG00000024098	ProperStrand	22	chr2	156846456	156846478	protein_coding	9830001H06Rik	exon	ENSMUSG00000055485	NonProperStrand	5	1	-19.2616
chr9	45724124	45724143	protein_coding	Pcsk7	exon	ENSMUSG00000035382	ProperStrand	8	chr4	131908232	131908314	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-5.0428
chr2	112202959	112202975	protein_coding	Slc12a6	utr3	ENSMUSG00000027130	NonProperStrand	72	chr12	17552950	17552983	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-4.7371
chr16	23111373	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	chr6	97112818	97112908	snoRNA	ENSMUSG00000065728_SNORA36	.	ENSMUSG00000065728	ProperStrand	158	8	-6.1940
chr4	43505712	43505792	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr11	103540416	103540506	protein_coding	Gosr2	utr3	ENSMUSG00000020946	ProperStrand	8	1	-7.0216
chr11	107513230	107513248	protein_coding	Helz	intron	ENSMUSG00000020721	NonProperStrand	7	chr16	23111776	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.9463
chr17	24665439	24665482	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	chr7	52382237	52382314	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	4	-3.8626
chr13	72765623	72765640	antisense	Gm20554	.	ENSMUSG00000093587	NonProperStrand	40	chr4	48598480	48598503	protein_coding	Tmeff1	exon	ENSMUSG00000028347	ProperStrand	47	1	-14.6417
chr14	51427119	51427219	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr5	140188309	140188326	protein_coding	Micall2	exon	ENSMUSG00000036718	NonProperStrand	18	1	-9.6392
chr7	138459653	138459669	protein_coding	Cuzd1	exon	ENSMUSG00000040205	NonProperStrand	59	chr5	115939528	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-7.8989
chr16	33059733	33059797	protein_coding-noncoding	Rpl35a	utr5	ENSMUSG00000060636	ProperStrand	2	chr4	131908356	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-8.3123
chr5	65952377	65952395	protein_coding	Ube2k	intron	ENSMUSG00000029203	ProperStrand	289	chr4	126804410	126804500	protein_coding	Gm12942	intron	ENSMUSG00000070737	ProperStrand	30	1	-11.5630
chr9	121662196	121663364	protein_coding	Nktr	exon	ENSMUSG00000032525	ProperStrand	41	chr18	35716831	35716858	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.8214
chr8	72287172	72287188	protein_coding	Zfp866	utr3	ENSMUSG00000043090	NonProperStrand	134	chr15	79913288	79913321	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-3.8965
chr7	132784773	132784821	protein_coding	Gtf3c1	utr3	ENSMUSG00000032777	ProperStrand	161	chr9	15119288	15119378	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	2	-5.5626
chr4	53015201	53015217	SINE	B1F1	Alu	chr4B1F153015138	ProperStrand	102	chr1	89116234	89117501	protein_coding	Eif4e2	exon	ENSMUSG00000026254	ProperStrand	26	1	-13.9367
chr15	79913288	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr4	41673405	41673421	protein_coding	Il11ra1	intron	ENSMUSG00000073889	ProperStrand	128	1	-2.2557
chr10	122003348	122003428	LINE	L1Md_F2	L1	chr10L1Md_F2122002095	NonProperStrand	23	chr2	104101656	104101746	protein_coding	D430041D05Rik	intron	ENSMUSG00000068373	ProperStrand	12	1	-18.3296
chr19	3602406	3604050	protein_coding	Lrp5	exon	ENSMUSG00000024913	ProperStrand	145	chr4	131865411	131865501	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-2.4165
chr15	79913301	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr4	116862592	116862662	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	2	-0.8441
chr11	97030193	97030246	protein_coding	Kpnb1	exon	ENSMUSG00000001440	ProperStrand	197	chr1	9684418	9684443	protein_coding	Mybl1	intron	ENSMUSG00000025912	ProperStrand	10	1	-14.5988
chr4	131908232	131908501	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr18	35716694	35716883	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	21	-5.1518
chr1	162967780	162967806	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	chr8	32260335	32260423	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	2	-3.4491
chr17	45723145	45723208	protein_coding	Slc29a1	exon	ENSMUSG00000023942	ProperStrand	95	chr8	32260335	32260424	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-3.7612
chr2	144358919	144360082	protein_coding	Polr3f	exon	ENSMUSG00000027427	ProperStrand	3	chr16	23111416	23111496	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-6.9982
chr9	106331871	106331904	protein_coding	Rpl29	utr5	ENSMUSG00000048758	ProperStrand	45	chr16	23111691	23111781	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-4.2245
chr2	129998643	129998713	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr14	55504586	55504636	protein_coding	Bcl2l2	utr3	ENSMUSG00000089682	ProperStrand	17	1	-10.6636
chrX	100669694	100669710	antisense	Tsix	.	ENSMUSG00000085715	ProperStrand	40	chr7	117166722	117166760	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-5.6059
chr17	36125501	36125601	protein_coding	Gnl1	exon	ENSMUSG00000024429	ProperStrand	70	chr18	75160711	75160776	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	1	-8.8787
chr4	151432640	151432740	protein_coding	Nol9	utr3	ENSMUSG00000028948	ProperStrand	93	chr2	144087324	144087373	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-5.6830
chr15	77597977	77597993	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr6	70794803	70794820	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	1	-6.9306
chr3	46250662	46250678	protein_coding	Pabpc4l	exon	ENSMUSG00000090919	ProperStrand	137	chr11	62416578	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-6.1002
chr5	115939533	115939584	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr15	98350145	98350181	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	4	-2.7734
chr6	124776409	124779307	protein_coding	Usp5	exon	ENSMUSG00000038429	ProperStrand	35	chr15	98350200	98350256	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-5.8127
chr12	3490316	3490376	protein_coding	Asxl2	intron	ENSMUSG00000037486	ProperStrand	21	chr11	55296285	55296332	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-8.2830
chr19	31940164	31940184	LTR	RMER19B	ERVK	chr19RMER19B31939576	ProperStrand	1	chr16	23110917	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr11	45723144	45723160	protein_coding	Clint1	utr3	ENSMUSG00000006169	NonProperStrand	273	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-8.6520
chrX	51060846	51060863	protein_coding	1700013H16Rik	intron	ENSMUSG00000054727	ProperStrand	3	chr16	23111757	23111811	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-7.8619
chr1	34304587	34304641	protein_coding	Dst	exon	ENSMUSG00000026131	ProperStrand	461	chr2	130004971	130004987	protein_coding	Snrpb	utr5	ENSMUSG00000027404	NonProperStrand	1	1	-inf
chr1	120577882	120577972	protein_coding	Tfcp2l1	utr3	ENSMUSG00000026380	ProperStrand	158	chr1	89673606	89673686	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	2	-3.0269
chr2	90235295	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chrX	130496426	130496668	protein_coding	Sytl4	exon	ENSMUSG00000031255	ProperStrand	169	2	-4.5083
chr9	65542611	65542701	protein_coding	Zfp609	utr3	ENSMUSG00000040524	ProperStrand	87	chr16	23110460	23110540	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.8521
chr8	83312592	83312612	protein_coding	Gab1	exon	ENSMUSG00000031714	ProperStrand	72	chr7	116663683	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-3.9436
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr2	144091716	144091816	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	ProperStrand	549	1	-2.2451
chr12	110168093	110168111	protein_coding	Wdr25	intron	ENSMUSG00000040877	ProperStrand	14	chr15	82210572	82210588	protein_coding	Cyp2d22	utr5	ENSMUSG00000061740	NonProperStrand	18	1	-18.7464
chr4	133981696	133981773	protein_coding	Pafah2	utr3	ENSMUSG00000037366	ProperStrand	19	chr9	120039586	120039676	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	7	-19.7584
chr3	133634023	133634041	lincRNA	Gm2078	intron	ENSMUSG00000091186	ProperStrand	3	chr2	145077957	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-14.0894
chr11	73108793	73108810	protein_coding	Trpv3	exon	ENSMUSG00000043029	ProperStrand	3	chr3	58810341	58810359	protein_coding	Gm10071	intron	ENSMUSG00000059776	ProperStrand	5	1	-inf
chr17	12897672	12908865	protein_coding	Igf2r	exon	ENSMUSG00000023830	ProperStrand	151	chr7	118219574	118219642	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-4.3976
chr10	40307396	40307412	protein_coding	Slc22a16	exon	ENSMUSG00000019834	NonProperStrand	11	chr1	89673711	89673765	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-6.5694
chr9	121823892	121823908	protein_coding	Cyp8b1	exon	ENSMUSG00000050445	NonProperStrand	101	chr10	23506305	23506348	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-5.9193
chr9	15118365	15121080	protein_coding	Taf1d	utr3	ENSMUSG00000031939	ProperStrand	363	chr19	8800426	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-1.5212
chr4	129195070	129195147	protein_coding	Hdac1	exon	ENSMUSG00000028800	NonProperStrand	2	chr6	108495381	108495400	protein_coding	Itpr1	intron	ENSMUSG00000030102	NonProperStrand	15	1	-inf
chr6	23197660	23197679	protein_coding	Fezf1	exon	ENSMUSG00000029697	NonProperStrand	2	chr15	88933948	88933996	protein_coding	Tubgcp6	exon	ENSMUSG00000051786	ProperStrand	15	1	-inf
chr15	59187499	59190827	protein_coding	E430025E21Rik	exon	ENSMUSG00000022350	ProperStrand	18	chr17	35299565	35299642	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-7.1621
chr16	57391626	57391716	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr15	34370550	34370640	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	NonProperStrand	21	2	-18.5944
chr17	21843298	21843378	Satellite	MMSAT4	Satellite	chr17MMSAT421843227	ProperStrand	1	chr17	21851388	21851478	protein_coding	Zfp760	intron	ENSMUSG00000067928	NonProperStrand	1	1	-inf
chr13	93455175	93458596	protein_coding	Serinc5	exon	ENSMUSG00000021703	ProperStrand	57	chr4	131865867	131865978	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.8480
chr17	35974981	35974997	protein_coding	Tubb5	exon	ENSMUSG00000001525	ProperStrand	624	chr5	108334196	108334261	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	2	-1.8075
chr8	109440113	109441488	protein_coding	Cirh1a	exon	ENSMUSG00000041438	ProperStrand	40	chr2	32818904	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-6.2691
chr3	89891614	89892327	protein_coding	Tpm3	exon	ENSMUSG00000027940	ProperStrand	55	chr9	15118332	15118369	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.6272
chr7	19722633	19722649	protein_coding	Fbxo46	utr3	ENSMUSG00000050428	NonProperStrand	24	chr18	75161534	75161598	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	5	-19.0338
chr9	50413550	50413567	protein_coding	AU019823	utr3	ENSMUSG00000059820	NonProperStrand	18	chr8	32260335	32260362	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-7.0098
chr4	148534987	148535024	protein_coding	Pgd	exon	ENSMUSG00000028961	ProperStrand	34	chr7	133636121	133636156	protein_coding	Atxn2l	utr3	ENSMUSG00000032637	ProperStrand	219	1	-11.8633
chr14	33023763	33027548	protein_coding	Parg	exon	ENSMUSG00000021911	ProperStrand	33	chr7	52382755	52382807	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-7.9467
chr14	47433925	47433953	protein_coding	Gmfb	exon	ENSMUSG00000062014	ProperStrand	5	chr11	69483152	69483242	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-7.3324
chr15	34945625	34945642	protein_coding	Stk3	intron	ENSMUSG00000022329	NonProperStrand	28	chr19	8963027	8963082	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.6314
chr6	142724107	142724207	protein_coding	Cmas	utr3	ENSMUSG00000030282	ProperStrand	14	chr9	64024954	64024998	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	1	-12.1024
chr19	23215858	23215874	protein_coding	Klf9	utr5	ENSMUSG00000033863	ProperStrand	83	chr2	130103751	130103779	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-7.8232
chr4	153410349	153410365	protein_coding	Ccdc27	exon	ENSMUSG00000039492	ProperStrand	94	chr16	23110454	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-3.1868
chr2	179322377	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr2	180869746	180869765	protein_coding	Kcnq2	exon	ENSMUSG00000016346	ProperStrand	5	1	-16.3282
chr4	131908232	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	chr9	64022854	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	15	-1.3600
chrX	71589890	71589907	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr18	35102297	35102345	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	3	-8.7807
chr8	26642798	26642889	protein_coding	Fgfr1	utr5	ENSMUSG00000091895	ProperStrand	16	chr10	23505169	23505249	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.4264
chr2	84530865	84531297	protein_coding	Zdhhc5	exon	ENSMUSG00000034075	NonProperStrand	144	chr3	85944580	85944610	snoRNA	ENSMUSG00000064390_Rnu73b	.	ENSMUSG00000064390	ProperStrand	164	1	-9.5396
chr7	31098945	31098961	protein_coding	Alkbh6	exon	ENSMUSG00000042831	NonProperStrand	22	chr7	116664871	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-4.3947
chr8	75092799	75093880	protein_coding	9130011J15Rik	exon	ENSMUSG00000044600	ProperStrand	9	chr7	150717298	150717316	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-9.3491
chr2	71275904	71275936	protein_coding	Hat1	intron	ENSMUSG00000027018	ProperStrand	53	chr11	51551324	51551414	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	1	-7.9473
chr5	150025099	150025116	protein_coding	Uspl1	exon	ENSMUSG00000041264	ProperStrand	20	chr18	35716812	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.1514
chr15	79991940	79991968	protein_coding	Tab1	utr3	ENSMUSG00000022414	ProperStrand	11	chr5	108334198	108334322	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-8.2190
chr7	146684406	146684425	protein_coding	Inpp5a	intron	ENSMUSG00000025477	ProperStrand	166	chr5	149861440	149861895	protein_coding	Hmgb1	exon	ENSMUSG00000066551	ProperStrand	99	1	-10.2655
chr1	173433180	173433204	protein_coding	B930036N10Rik	utr3	ENSMUSG00000091993	ProperStrand	150	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-3.4654
chr17	57161958	57162048	protein_coding	Khsrp	utr3	ENSMUSG00000007670	ProperStrand	353	chr5	108334264	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-1.6801
chr17	46861595	46861611	protein_coding	Pex6	exon	ENSMUSG00000002763	ProperStrand	292	chr7	117189865	117189953	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-0.8609
chr7	4698428	4698518	protein_coding	Suv420h2	utr3	ENSMUSG00000059851	ProperStrand	60	chr11	69481373	69481453	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.2006
chr8	114146911	114146928	protein_coding	Znrf1	utr3	ENSMUSG00000033545	ProperStrand	13	chr9	15119967	15119994	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-10.3552
chr13	55633026	55633203	protein_coding	Ddx41	exon	ENSMUSG00000021494	ProperStrand	45	chr4	120726869	120726886	protein_coding	Col9a2	exon	ENSMUSG00000028626	ProperStrand	35	1	-14.9860
chr2	90235296	90235345	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr18	42805538	42805554	protein_coding	Ppp2r2b	exon	ENSMUSG00000024500	NonProperStrand	95	1	-3.5991
chr17	34281651	34281741	protein_coding	H2-DMb2	intron	ENSMUSG00000037548	NonProperStrand	1	chr14	10808815	10808895	protein_coding	Fhit	intron	ENSMUSG00000060579	NonProperStrand	51	1	-inf
chr4	46513723	46513848	protein_coding	Nans	exon	ENSMUSG00000028334	ProperStrand	18	chr19	8800453	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-5.8558
chr11	84213921	84214021	protein_coding	Acaca	utr3	ENSMUSG00000020532	ProperStrand	100	chr2	26494756	26494828	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-3.9667
chr8	86442898	86442916	protein_coding	Lphn1	exon	ENSMUSG00000013033	NonProperStrand	4	chr8	44382040	44382108	protein_coding	Zfp42	intron	ENSMUSG00000051176	ProperStrand	127	1	-17.5987
chr14	51427119	51427219	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr4	106335558	106335614	protein_coding	Ttc4	utr3	ENSMUSG00000025413	ProperStrand	16	3	-20.0314
chr8	18802278	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr4	131908236	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	8	-1.4435
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr8	123621758	123621775	protein_coding	Mthfsd	utr3	ENSMUSG00000031816	ProperStrand	2	1	-13.3349
chr2	32817270	32817336	protein_coding	Rpl12	utr5	ENSMUSG00000038900	ProperStrand	167	chr11	97642954	97643044	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-0.9436
chr2	90235317	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	96904242	96904259	protein_coding	Fam19a4	intron	ENSMUSG00000046500	ProperStrand	19	1	-6.7268
chr1	183761802	183761821	protein_coding	Lbr	exon	ENSMUSG00000004880	ProperStrand	97	chr10	17635624	17635640	protein_coding	Heca	exon	ENSMUSG00000039879	NonProperStrand	4	1	-17.9974
chr11	68936358	68936374	protein_coding	Hes7	exon	ENSMUSG00000023781	NonProperStrand	66	chr7	29136525	29136548	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.2056
chr8	98263785	98322756	protein_coding	Cnot1	intron	ENSMUSG00000036550	ProperStrand	315	chr7	29136599	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-1.2525
chr7	53653469	53653487	protein_coding	Kcnc1	exon	ENSMUSG00000058975	ProperStrand	21	chr1	155253280	155253297	protein_coding	E330020D12Rik	utr3	ENSMUSG00000073538	NonProperStrand	1	1	-inf
chr1	155318836	155318893	protein_coding	Dhx9	exon	ENSMUSG00000042699	ProperStrand	98	chr2	130101240	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-5.6259
chr17	26279888	26331883	protein_coding	Axin1	exon	ENSMUSG00000024182	ProperStrand	28	chr3	123210854	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-5.8327
chr2	90235298	90235324	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	97546368	97546470	protein_coding	Mllt6	utr3	ENSMUSG00000038437	ProperStrand	110	1	-3.3307
chr1	88426327	88426541	protein_coding	Ptma	exon	ENSMUSG00000026238	ProperStrand	385	chr5	137736263	137736348	protein_coding	Ufsp1	exon	ENSMUSG00000051502	ProperStrand	1	1	-inf
chrX	132673816	132673833	protein_coding	Bex4	intron	ENSMUSG00000047844	NonProperStrand	70	chr15	98350146	98350179	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	2	-7.4313
chr7	116664096	116665164	protein_coding	Rpl27a	exon	ENSMUSG00000046364	ProperStrand	149	chr11	97642952	97643047	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-2.1233
chr1	60005907	60005987	protein_coding	Fam117b	exon	ENSMUSG00000041040	ProperStrand	31	chr11	6520321	6520411	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	1	-9.0443
chr17	57162822	57162993	protein_coding	Khsrp	exon	ENSMUSG00000007670	ProperStrand	353	chr2	26494707	26494797	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	3	-1.9816
chr8	32260335	32260370	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	chr12	110874223	110874291	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	1	-1.6925
chr10	80737533	80737932	protein_coding	Tjp3	exon	ENSMUSG00000034917	NonProperStrand	3	chr5	74489568	74489620	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-10.0122
chr4	125389115	125389132	protein_coding	Grik3	utr3	ENSMUSG00000001985	ProperStrand	126	chr10	5991638	5991680	protein_coding	Akap12	exon	ENSMUSG00000038587	ProperStrand	1008	1	-6.2056
chr4	43505838	43505918	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr6	113071737	113078428	protein_coding	Setd5	exon	ENSMUSG00000034269	ProperStrand	162	1	-1.4412
chr7	135058894	135058910	protein_coding	Myst1	exon	ENSMUSG00000030801	ProperStrand	4	chr7	116663633	116663698	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-7.9103
chr18	38748969	38749041	protein_coding	Spry4	utr3	ENSMUSG00000024427	ProperStrand	24	chr10	105010980	105010997	protein_coding	Tmtc2	utr5	ENSMUSG00000036019	ProperStrand	72	1	-14.8050
chr9	59527064	59527149	protein_coding	Pkm2	utr3	ENSMUSG00000032294	NonProperStrand	18	chr2	145076805	145209256	protein_coding	Slc24a3	intron	ENSMUSG00000063873	ProperStrand	9	1	-18.8602
chr5	65952377	65952395	protein_coding	Ube2k	intron	ENSMUSG00000029203	ProperStrand	289	chr4	131908319	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-0.7465
chr12	112565198	112565215	protein_coding	Cdc42bpb	intron	ENSMUSG00000021279	ProperStrand	128	chr15	89184381	89184516	protein_coding	Lmf2	exon	ENSMUSG00000022614	ProperStrand	19	1	-14.1261
chr5	24208215	24208258	protein_coding	Nub1	exon	ENSMUSG00000028954	ProperStrand	32	chr18	35716764	35716854	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	8	-19.9425
chr1	20793348	20802052	protein_coding	Mcm3	utr3	ENSMUSG00000041859	ProperStrand	142	chr11	69481367	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	8	-16.2532
chr16	91466139	91466177	lincRNA	A930006K02Rik	intron	ENSMUSG00000084866	ProperStrand	2	chrX	13099315	13099332	protein_coding	Cask	exon	ENSMUSG00000031012	ProperStrand	41	1	-inf
chr7	148066327	148066430	protein_coding	Sirt3	intron	ENSMUSG00000025486	ProperStrand	33	chr2	26493366	26493420	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	6	-20.8658
chr4	40675304	40675339	protein_coding	Dnaja1	intron	ENSMUSG00000028410	ProperStrand	20	chr11	6428088	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	4	-16.5512
chr1	174437047	174437068	protein_coding	Tagln2	utr3	ENSMUSG00000026547	ProperStrand	39	chr3	157729845	157729903	protein_coding	Lrrc40	utr3	ENSMUSG00000063052	ProperStrand	147	2	-18.4894
chr2	126621070	126622890	protein_coding	Trpm7	exon	ENSMUSG00000027365	ProperStrand	34	chr1	10178924	10178947	protein_coding	Arfgef1	exon	ENSMUSG00000067851	ProperStrand	54	1	-14.6710
chr9	61762189	61762222	protein_coding	Rplp1	exon	ENSMUSG00000007892	ProperStrand	116	chr16	23111437	23111501	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-2.9125
chr4	34030856	34030872	protein_coding	Cnr1	exon	ENSMUSG00000044288	ProperStrand	8	chr16	23110910	23110940	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.2180
chr13	73604778	73606785	protein_coding	Lpcat1	intron	ENSMUSG00000021608	ProperStrand	42	chr11	97642952	97643080	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	10	-inf
chr9	21934462	21934478	protein_coding	Acp5	exon	ENSMUSG00000001348	ProperStrand	66	chr19	8963122	8963163	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.1173
chr10	63762970	63762989	protein_coding	Ctnna3	intron	ENSMUSG00000060843	ProperStrand	66	chr5	121655127	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.5709
chr5	141090405	141090422	protein_coding	Lfng	exon	ENSMUSG00000029570	NonProperStrand	92	chr1	88247817	88247862	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-4.2768
chr11	77678787	77678814	protein_coding	Myo18a	utr3	ENSMUSG00000000631	ProperStrand	124	chr7	51828028	51828044	protein_coding	Napsa	exon	ENSMUSG00000002204	ProperStrand	88	1	-11.0859
chr2	166890502	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	chr8	113366322	113366354	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	1	-3.5624
chr19	44368888	44369417	protein_coding	Scd2	exon	ENSMUSG00000025203	ProperStrand	219	chr12	112779218	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	2	-4.2539
chr6	125112968	125113052	protein_coding	Gapdh	exon	ENSMUSG00000057666	ProperStrand	356	chr2	26494774	26494809	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	4	-2.9683
chr16	46458244	46458319	protein_coding	Pvrl3	exon	ENSMUSG00000022656	ProperStrand	11	chr4	131908688	131908749	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.1344
chrX	132378598	132378659	protein_coding	Gprasp2	exon	ENSMUSG00000072966	ProperStrand	11	chr19	8798758	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-8.1994
chr14	15572352	15572370	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr3	105265054	105265072	protein_coding	Kcnd3	intron	ENSMUSG00000040896	NonProperStrand	44	1	-11.9091
chr2	120357773	120357816	protein_coding	Zfp106	exon	ENSMUSG00000027288	ProperStrand	199	chr11	70495079	70495107	protein_coding	Camta2	exon	ENSMUSG00000040712	NonProperStrand	2	2	-inf
chr1	44013335	44013381	protein_coding	Tpp2	exon	ENSMUSG00000041763	ProperStrand	22	chr8	73419657	73419726	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-8.3362
chr7	71113296	71113386	LTR	MTD	MaLR	chr7MTD71113264	NonProperStrand	1	chr7	71113516	71113596	Other	RMER1B	Other	chr7RMER1B71113488	NonProperStrand	1	1	-inf
chr12	25398373	25398410	protein_coding	Rrm2	utr3	ENSMUSG00000020649	ProperStrand	65	chr15	11324041	11324130	protein_coding	Tars	exon	ENSMUSG00000022241	ProperStrand	121	6	-18.9976
chr6	115757992	115758125	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chrX	71517821	71517956	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	3	-1.1493
chr9	103236443	103240528	protein_coding	Topbp1	exon	ENSMUSG00000032555	ProperStrand	81	chr16	23110891	23110989	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-0.8511
chr2	130102031	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	chr9	15116994	15117022	snoRNA	ENSMUSG00000077614_SNORA40	.	ENSMUSG00000077614	ProperStrand	54	2	-9.1015
chr16	25069108	25069124	lincRNA	A230028O05Rik	exon	ENSMUSG00000085040	NonProperStrand	8	chr11	97643007	97643079	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-6.3446
chr16	19883898	19884021	protein_coding	A930003A15Rik	exon	ENSMUSG00000075330	ProperStrand	93	chr10	23505152	23505246	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-0.6988
chr2	91096935	91096955	protein_coding-noncoding	Pacsin3	utr5	ENSMUSG00000027257	NonProperStrand	1	chr9	15119630	15119728	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-inf
chr19	10823569	10823587	protein_coding	A430093F15Rik	intron	ENSMUSG00000067577	NonProperStrand	34	chr19	8963087	8963183	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.2720
chr10	119801292	119801344	lincRNA	1700006J14Rik	exon	ENSMUSG00000034764	ProperStrand	12	chr14	63287586	63287615	protein_coding	Serpine3	intron	ENSMUSG00000091155	ProperStrand	210	2	-inf
chr9	110842644	110843150	protein_coding	Tdgf1	utr3	ENSMUSG00000032494	ProperStrand	218	chr9	120038466	120038673	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	4	-4.6687
chr11	85651938	85651954	protein_coding	Tbx2	exon	ENSMUSG00000000093	NonProperStrand	14	chr11	7067186	7069426	protein_coding	Adcy1	exon	ENSMUSG00000020431	ProperStrand	183	1	-14.0460
chrX	33607698	33607715	protein_coding	Dock11	exon	ENSMUSG00000031093	ProperStrand	42	chr9	45203465	45203533	protein_coding	Fxyd6	utr3	ENSMUSG00000066705	ProperStrand	30	2	-inf
chr5	118376503	118376519	protein_coding	Nos1	exon	ENSMUSG00000029361	NonProperStrand	237	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-8.0159
chr1	88253023	88253201	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chr9	103225811	103225901	protein_coding	Topbp1	exon	ENSMUSG00000032555	ProperStrand	81	1	-6.7610
chr8	122129036	122129052	protein_coding	Taf1c	utr5	ENSMUSG00000031832	ProperStrand	26	chr3	108357255	108357310	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-6.1769
chr17	35643292	35647429	protein_coding	Pou5f1	exon	ENSMUSG00000024406	ProperStrand	104	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-1.9919
chr5	103854542	103891155	protein_coding	Ptpn13	utr5	ENSMUSG00000034573	NonProperStrand	74	chr17	39985306	39985349	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	2	-9.0316
chr11	119990559	119990609	protein_coding	Slc38a10	exon	ENSMUSG00000061306	ProperStrand	91	chr1	162967518	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-2.7274
chr8	72544947	72545018	protein_coding	Mau2	intron	ENSMUSG00000031858	ProperStrand	17	chr10	23505152	23505197	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.3129
chr17	56457525	56457721	protein_coding	Uhrf1	exon	ENSMUSG00000001228	ProperStrand	229	chr13	49779768	49779802	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-4.4030
chr11	45723144	45723160	protein_coding	Clint1	utr3	ENSMUSG00000006169	NonProperStrand	273	chr2	103613156	103613203	protein_coding	Caprin1	exon	ENSMUSG00000027184	ProperStrand	145	1	-8.5095
chr10	52101855	52101872	protein_coding	Gopc	utr5	ENSMUSG00000019861	ProperStrand	4	chr8	91552362	91552392	protein_coding	Sall1	exon	ENSMUSG00000031665	ProperStrand	96	1	-17.8940
chr12	82510237	82510327	protein_coding	Cox16	intron	ENSMUSG00000091803	ProperStrand	5	chr11	68886928	68887008	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-9.2042
chr7	20303035	20303056	protein_coding	Pvrl2	exon	ENSMUSG00000062300	ProperStrand	110	chr19	8800355	8800444	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	4	-8.8616
chr19	29091377	29091477	protein_coding	Cdc37l1	utr3	ENSMUSG00000024780	ProperStrand	13	chr4	131908236	131908345	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	8	-inf
chr11	97551377	97551418	protein_coding	Pcgf2	exon	ENSMUSG00000018537	ProperStrand	31	chr12	112779148	112779238	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-6.0689
chr16	75761550	75765200	protein_coding	Hspa13	exon	ENSMUSG00000032932	NonProperStrand	57	chr5	130300517	130300553	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.5978
chr8	106867761	106868707	protein_coding	Cmtm3	exon	ENSMUSG00000031875	ProperStrand	5	chr1	162965981	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	4	-20.3524
chr5	65952377	65952395	protein_coding	Ube2k	intron	ENSMUSG00000029203	ProperStrand	289	chr4	116827120	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-3.9904
chr7	57356882	57356901	protein_coding	Nell1	intron	ENSMUSG00000055409	NonProperStrand	13	chr2	26494708	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	6	-20.2067
chr18	35106185	35106285	protein_coding	Hspa9	exon	ENSMUSG00000024359	ProperStrand	166	chr1	89681350	89681397	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	20	-inf
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr8	123196754	123196780	protein_coding	Cox4i1	exon	ENSMUSG00000031818	ProperStrand	31	1	-8.2466
chr14	49278447	49278537	protein_coding	Otx2	exon	ENSMUSG00000021848	ProperStrand	19	chr5	130300461	130300541	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.6362
chr1	94366596	94366633	protein_coding	Ndufa10	exon	ENSMUSG00000026260	ProperStrand	14	chr11	69481387	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-6.0079
chr8	73419657	73419782	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	chr3	68889024	68889369	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	63	-1.9876
chr9	106183979	106183996	protein_coding	Poc1a	intron	ENSMUSG00000023345	ProperStrand	27	chr5	54389949	54389967	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	1	-12.3965
chr5	149860313	149860413	protein_coding	Hmgb1	exon	ENSMUSG00000066551	ProperStrand	99	chr19	8798740	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-3.8506
chr13	62471504	62471582	protein_coding	Gm3604	exon	ENSMUSG00000091183	ProperStrand	8	chr9	15118258	15118321	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	8	-inf
chr1	123462476	123462556	protein_coding	Ddx18	exon	ENSMUSG00000001674	ProperStrand	41	chr12	81322478	81322568	protein_coding	Actn1	intron	ENSMUSG00000015143	ProperStrand	128	1	-12.5607
chr15	76333985	76334001	protein_coding	Dgat1	exon	ENSMUSG00000022555	NonProperStrand	2	chr6	125136422	125136467	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	1	-13.8789
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr1	11736129	11736149	protein_coding	A830018L16Rik	intron	ENSMUSG00000057715	ProperStrand	7	1	-13.3521
chr6	47731647	47731707	misc_RNA	Y_RNA	.	ENSMUSG00000064945	ProperStrand	93	chr4	131908356	131908439	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.8464
chr17	13115655	13115786	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	chr11	68886929	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	8	-4.7253
chr2	26493474	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	1	-2.4211
chr10	61155718	61155773	protein_coding	Sar1a	utr3	ENSMUSG00000020088	ProperStrand	15	chr9	113668786	113668802	protein_coding	Clasp2	intron	ENSMUSG00000033392	NonProperStrand	20	1	-18.2333
chr9	50816824	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	chr2	130101971	130102061	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-3.9223
chr2	146855510	146855654	protein_coding	Xrn2	exon	ENSMUSG00000027433	ProperStrand	48	chr7	26149122	26149222	protein_coding	Megf8	exon	ENSMUSG00000045039	ProperStrand	100	1	-12.7392
chr11	69266813	69266829	protein_coding	Dnahc2	exon	ENSMUSG00000005237	ProperStrand	95	chr4	107973053	107973069	protein_coding	Zyg11b	intron	ENSMUSG00000034636	NonProperStrand	17	1	-14.9537
chr8	13416896	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr9	119804298	119804315	protein_coding	Wdr48	intron	ENSMUSG00000032512	NonProperStrand	1	1	-inf
chr6	128650210	128650300	LINE	L1Md_F	L1	chr6L1Md_F128650213	NonProperStrand	1	chr6	128650005	128650095	LINE	L1_Mus2	L1	chr6L1_Mus2128644136	NonProperStrand	2	1	-inf
chr11	3649570	3649587	protein_coding	Osbp2	intron	ENSMUSG00000020435	ProperStrand	60	chr2	178194799	178194816	protein_coding	Cdh26	exon	ENSMUSG00000039155	NonProperStrand	77	1	-12.8125
chr11	40141167	40141256	lincRNA	Gm12132	intron	ENSMUSG00000085301	ProperStrand	5	chr13	77167148	77167228	protein_coding	Mctp1	intron	ENSMUSG00000021596	NonProperStrand	13	1	-19.9979
chr11	51456648	51456669	protein_coding	N4bp3	utr3	ENSMUSG00000001053	ProperStrand	45	chr16	23111772	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.3757
chr12	17552949	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr18	74938039	74938122	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	ProperStrand	1022	5	-4.1533
chr11	3150096	3164447	protein_coding	Drg1	intron	ENSMUSG00000020457	ProperStrand	19	chr16	23110509	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-7.6701
chr12	86019686	86019703	protein_coding	Tmem90a	exon	ENSMUSG00000071234	ProperStrand	13	chr2	155904703	155904858	protein_coding	Cpne1	exon	ENSMUSG00000074643	ProperStrand	10	1	-21.7531
chr17	25080613	25080664	protein_coding	Hn1l	utr3	ENSMUSG00000024165	ProperStrand	45	chr19	8963104	8963172	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	10	-inf
chr7	88489430	88489446	protein_coding	Rps17	intron	ENSMUSG00000061787	ProperStrand	105	chr10	110918593	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-2.4570
chr10	75256943	75259788	protein_coding	Gstt1	exon	ENSMUSG00000001663	ProperStrand	3	chr17	35299566	35299633	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	3	-inf
chr17	56257328	56257344	LTR	RLTR25B	ERVK	chr17RLTR25B56257276	NonProperStrand	75	chr19	55573065	55573742	protein_coding	Vti1a	exon	ENSMUSG00000024983	ProperStrand	14	1	-15.8481
chr17	66355846	66355936	protein_coding	Ankrd12	intron	ENSMUSG00000034647	ProperStrand	15	chr16	23111389	23111469	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.5828
chr5	108333575	108333665	snoRNA	ENSMUSG00000064453_Snord21	.	ENSMUSG00000064453	ProperStrand	201	chr11	6428088	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.2348
chr2	90235290	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	18974608	18974624	LTR	LTR84a	ERVL	chr1LTR84a18974334	NonProperStrand	22	2	-10.4561
chr7	114886563	114886579	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	chr11	62590592	62590630	snoRNA	ENSMUSG00000064692_SNORA67	.	ENSMUSG00000064692	ProperStrand	185	1	-6.5895
chr5	121655016	121655153	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	chr2	91436230	91436336	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	6	-1.9058
chrX	91435868	91435958	protein_coding	Eif2s3x	utr3	ENSMUSG00000035150	ProperStrand	55	chr14	76247754	76247834	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-4.3373
chr18	37801931	37801977	protein_coding	Taf7	utr3	ENSMUSG00000051316	ProperStrand	24	chr16	23110530	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.1305
chr3	96132412	96132514	snRNA	ENSMUSG00000075978_U1	.	ENSMUSG00000075978	ProperStrand	132	chr7	117189934	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	14	-19.9317
chr12	63334213	63334230	LTR	RLTR9E	ERVK	chr12RLTR9E63333890	NonProperStrand	15	chr10	23505261	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.5481
chr8	81033366	81033466	protein_coding	Slc10a7	utr5	ENSMUSG00000031684	ProperStrand	55	chr1	88252836	88252874	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	3	-15.4429
chr4	106335515	106344264	protein_coding	Ttc4	utr3	ENSMUSG00000025413	ProperStrand	16	chr16	23111383	23111505	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	8	-20.0080
chr8	72542002	72542102	protein_coding	Mau2	utr3	ENSMUSG00000031858	ProperStrand	17	chr11	69483136	69483211	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.7874
chr18	60936712	60937523	protein_coding	Rps14	exon	ENSMUSG00000024608	ProperStrand	154	chr3	95980321	95980401	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-5.0107
chr11	98872261	98872317	protein_coding	Top2a	exon	ENSMUSG00000020914	ProperStrand	324	chr4	131908689	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	6	-1.0023
chr4	151433407	151433423	protein_coding	Nol9	utr3	ENSMUSG00000028948	ProperStrand	93	chr19	8798484	8798516	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-4.3686
chr18	12172461	12172477	protein_coding	6030446N20Rik	intron	ENSMUSG00000049411	ProperStrand	235	chr10	90432659	90432678	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	1	-7.8895
chr7	112782969	112782985	protein_coding	Arfip2	utr3	ENSMUSG00000030881	ProperStrand	191	chr4	133571642	133571668	protein_coding	Lin28a	intron	ENSMUSG00000050966	ProperStrand	55	1	-11.1656
chr7	136800631	136800649	SINE	RSINE1	B4	chr7RSINE1136800606	ProperStrand	216	chr3	94690014	94690070	protein_coding	Psmb4	exon	ENSMUSG00000005779	ProperStrand	26	1	-12.4360
chr7	150251913	150252222	protein_coding	Cd81	exon	ENSMUSG00000037706	ProperStrand	88	chr17	35088957	35088979	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-5.1204
chr13	11773255	11773323	protein_coding	Ryr2	exon	ENSMUSG00000021313	ProperStrand	61	chr2	147011594	147011610	protein_coding	Nkx2-2	exon	ENSMUSG00000027434	ProperStrand	47	1	-13.7766
chr8	108411281	108411483	protein_coding	Edc4	exon	ENSMUSG00000036270	ProperStrand	34	chr19	8799048	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-6.9588
chr9	24549583	24549622	protein_coding	Tbx20	intron	ENSMUSG00000031965	NonProperStrand	110	chr11	69481332	69481431	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	3	-5.8310
chr14	31949316	31949335	protein_coding	Nt5dc2	exon	ENSMUSG00000071547	ProperStrand	22	chr16	23109052	23109091	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-9.3022
chr7	52382234	52382262	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	chr15	79908959	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-1.1095
chr1	40053934	40053951	protein_coding	Map4k4	exon	ENSMUSG00000026074	ProperStrand	348	chr19	5686163	5686182	protein_coding	Pcnxl3	exon	ENSMUSG00000054874	ProperStrand	96	1	-8.8494
chr13	29095359	29095377	LTR	RMER6A	ERVK	chr13RMER6A29094888	ProperStrand	2	chr16	23110827	23110851	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr13	19684241	19684257	protein_coding	Epdr1	utr3	ENSMUSG00000002808	ProperStrand	46	chr16	37384897	37384913	protein_coding	Stxbp5l	utr5	ENSMUSG00000022829	ProperStrand	332	1	-10.4204
chr12	109433229	109433270	protein_coding	Ccnk	intron	ENSMUSG00000021258	ProperStrand	31	chr11	114571449	114572131	protein_coding	Ttyh2	exon	ENSMUSG00000034714	ProperStrand	23	2	-18.9596
chr7	88210283	88210308	processed_transcript	Gm16012	.	ENSMUSG00000085194	ProperStrand	1	chr12	81285817	81285860	protein_coding	Actn1	exon	ENSMUSG00000015143	ProperStrand	128	1	-inf
chr19	7681629	7681645	protein_coding	Lgals12	utr5	ENSMUSG00000024972	ProperStrand	10	chr9	21159116	21159164	protein_coding	Slc44a2	utr3	ENSMUSG00000057193	ProperStrand	26	1	-18.3337
chr12	72932836	72932853	protein_coding	Daam1	intron	ENSMUSG00000034574	NonProperStrand	15	chr7	120001605	120001683	protein_coding	Tead1	intron	ENSMUSG00000055320	ProperStrand	217	1	-13.5588
chr11	115999916	115999932	protein_coding	Mrpl38	exon	ENSMUSG00000020775	NonProperStrand	65	chr4	131865855	131865898	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.6453
chr11	87913128	87913145	processed_transcript	2210416O15Rik	.	ENSMUSG00000087498	ProperStrand	76	chr5	108334194	108334242	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-4.3671
chr11	29596733	29606413	protein_coding	Rtn4	exon	ENSMUSG00000020458	ProperStrand	117	chr7	116664820	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-2.7780
chr10	39541814	39541842	protein_coding	Rev3l	exon	ENSMUSG00000019841	ProperStrand	39	chr11	77996558	77996594	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-6.9466
chr15	79913288	79913340	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr9	40612829	40612897	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	4	-3.5588
chr11	102972980	102972996	protein_coding	Acbd4	utr3	ENSMUSG00000056938	NonProperStrand	3	chr8	129468751	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-10.6897
chr2	130268323	130268389	protein_coding	Vps16	exon	ENSMUSG00000027411	ProperStrand	25	chr11	68886998	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	4	-17.9964
chr5	3734082	3734169	protein_coding	Ankib1	exon	ENSMUSG00000040351	ProperStrand	12	chr18	35716810	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	6	-19.7757
chr6	83111671	83111687	protein_coding	1700003E16Rik	exon	ENSMUSG00000030030	ProperStrand	352	chr11	68715900	68716699	protein_coding	Rpl26	exon	ENSMUSG00000060938	ProperStrand	130	1	-8.2216
chr7	50484822	50484912	LINE	Lx	L1	chr7Lx50484272	ProperStrand	2	chr4	131866161	131866241	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-inf
chr2	154135292	154135309	protein_coding	Bpifb9b	exon	ENSMUSG00000067996	ProperStrand	2	chr19	8963090	8963184	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-17.8653
chr19	8798484	8798553	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	chr5	108336363	108336495	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	8	-1.0268
chr19	45588567	45588601	protein_coding	Btrc	exon	ENSMUSG00000025217	ProperStrand	14	chr9	120038591	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	3	-13.7313
chr16	65542423	65542440	protein_coding	Chmp2b	intron	ENSMUSG00000004843	ProperStrand	3	chr11	6428142	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-9.3720
chr1	182866750	182866840	protein_coding	Lefty1	exon	ENSMUSG00000038793	ProperStrand	28	chr9	120039596	120039676	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-4.7581
chr2	167318158	167318183	protein_coding	Spata2	intron	ENSMUSG00000047030	ProperStrand	9	chr5	108336462	108336484	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-8.7031
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	6531460	6531478	protein_coding	Nrxn2	exon	ENSMUSG00000033768	ProperStrand	19	1	-6.7268
chr2	26766802	26766855	snoRNA	ENSMUSG00000065258_SNORD24	.	ENSMUSG00000065258	ProperStrand	130	chr3	123210884	123210985	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	5	-6.0444
chr2	13976914	13976932	protein_coding	Ptpla	intron	ENSMUSG00000063275	NonProperStrand	5	chr2	26494708	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-8.0805
chr7	29184917	29185017	protein_coding	Samd4b	utr3	ENSMUSG00000037513	ProperStrand	72	chr14	33005038	33005064	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-3.6532
chr11	120673015	120673155	protein_coding	Fasn	exon	ENSMUSG00000025153	ProperStrand	298	chr11	58115668	58115740	tRNA	tRNA1912-GluCTC	.	129407	ProperStrand	12	1	-13.3857
chr3	107471017	107471201	protein_coding	Ahcyl1	exon	ENSMUSG00000027893	ProperStrand	81	chr10	23505152	23505279	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	12	-20.5789
chr10	126958127	126959389	protein_coding	Shmt2	utr5	ENSMUSG00000025403	ProperStrand	94	chr1	89673569	89673649	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-2.4719
chr15	44504363	44504384	protein_coding	Sybu	exon	ENSMUSG00000022340	NonProperStrand	28	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-9.2727
chr5	53531803	53531820	protein_coding	Sel1l3	intron	ENSMUSG00000029189	NonProperStrand	17	chr14	76247711	76247745	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-6.6490
chr7	129311237	129312140	protein_coding	Plk1	exon	ENSMUSG00000030867	ProperStrand	146	chr18	35716759	35716839	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-0.8878
chr13	95958950	95958968	protein_coding	Pde8b	intron	ENSMUSG00000021684	NonProperStrand	13	chr2	130101972	130102075	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	NonProperStrand	12	1	-20.5400
chr11	11701825	11701925	protein_coding	Fignl1	exon	ENSMUSG00000035455	ProperStrand	10	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-7.6230
chr10	80017096	80017115	protein_coding	Rexo1	intron	ENSMUSG00000047417	ProperStrand	46	chr11	97642998	97643088	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.9356
chr4	132858360	132859498	protein_coding	Wdtc1	exon	ENSMUSG00000037622	ProperStrand	81	chr15	79913288	79913330	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-5.2551
chr11	87649923	87650013	DNA	URR1A	MER1_type	chr11URR1A87649905	ProperStrand	1	chr11	87649754	87649834	SINE	B4A	B4	chr11B4A87649630	ProperStrand	1	1	-inf
chr4	149090035	149090092	protein_coding	Tmem201	utr3	ENSMUSG00000044700	ProperStrand	60	chr4	131908707	131908797	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.2237
chr2	149913024	149913042	LTR	RMER13B	ERVK	chr2RMER13B149912604	ProperStrand	2	chr12	88778746	88778793	protein_coding	Alkbh1	intron	ENSMUSG00000079036	ProperStrand	70	2	-inf
chr3	85944551	85944611	snoRNA	ENSMUSG00000064390_Rnu73b	.	ENSMUSG00000064390	ProperStrand	164	chr19	8963030	8963172	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	6	-7.1277
chr9	65551168	65551229	protein_coding	Zfp609	exon	ENSMUSG00000040524	ProperStrand	87	chr2	166890552	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-6.8189
chr4	135494991	135495007	protein_coding	Fuca1	exon	ENSMUSG00000028673	ProperStrand	16	chr1	90967031	90967132	protein_coding	Sh3bp4	utr5	ENSMUSG00000036206	ProperStrand	20	2	-19.7025
chr9	72582947	72582995	protein_coding	Nedd4	exon	ENSMUSG00000032216	ProperStrand	308	chr7	134705036	134705068	protein_coding	Srcap	utr3	ENSMUSG00000090663	ProperStrand	28	3	-inf
chr2	162139562	162139580	protein_coding	Ptprt	intron	ENSMUSG00000053141	NonProperStrand	46	chr11	97642952	97643082	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.9356
chr17	75690723	75690739	protein_coding	Ltbp1	exon	ENSMUSG00000001870	ProperStrand	136	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-6.1188
chr6	119898382	119898458	protein_coding	Wnk1	exon	ENSMUSG00000045962	ProperStrand	221	chr13	49779749	49779802	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-4.4705
chr19	5686669	5686769	protein_coding-noncoding	Pcnxl3	utr3	ENSMUSG00000054874	ProperStrand	1	chr3	123210912	123210972	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-inf
chr17	13112480	13112528	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	chr7	134671409	134671511	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	21	-19.7067
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr9	44216836	44216881	protein_coding	Rps25	exon	ENSMUSG00000009927	ProperStrand	42	1	-5.6503
chr8	72334599	72334615	protein_coding	Gmip	exon	ENSMUSG00000036246	ProperStrand	102	chr1	33826683	33826724	protein_coding	Zfp451	exon	ENSMUSG00000042197	ProperStrand	17	1	-14.8104
chr4	43505862	43505931	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr6	25638699	25638715	protein_coding	Gpr37	exon	ENSMUSG00000039904	ProperStrand	49	1	-3.4383
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr3	66039786	66039802	protein_coding	Veph1	intron	ENSMUSG00000027831	ProperStrand	12	1	-9.1521
chr19	8963032	8963048	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	chr17	35089181	35089236	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-2.5571
chr14	56450619	56450724	protein_coding	Nfatc4	intron	ENSMUSG00000023411	ProperStrand	16	chr1	162967526	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-6.0334
chrX	84483699	84483758	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr4	56910495	56910613	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	6	-10.3129
chr9	120038466	120038544	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	chr7	88674790	88674867	snoRNA	ENSMUSG00000093107_AC167122.1	.	ENSMUSG00000093107	ProperStrand	110	1	-2.0051
chr17	45710133	45710213	protein_coding	Hsp90ab1	utr5	ENSMUSG00000023944	ProperStrand	1627	chr16	87419194	87419284	snoRNA	ENSMUSG00000065647_SNORA2	.	ENSMUSG00000065647	ProperStrand	123	1	-5.3205
chr2	110452029	110452045	protein_coding	Slc5a12	intron	ENSMUSG00000041644	ProperStrand	5	chr9	120038467	120038492	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-8.0049
chr7	19665734	19665789	protein_coding	Dmwd	exon	ENSMUSG00000030410	ProperStrand	41	chr11	98878354	98878456	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-7.0409
chr11	97889684	97889731	protein_coding	Rpl19	exon	ENSMUSG00000017404	ProperStrand	120	chr13	76341035	76341055	protein_coding	Fam81b	intron	ENSMUSG00000078966	NonProperStrand	220	1	-9.3175
chr11	79842724	79842758	protein_coding	Suz12	exon	ENSMUSG00000017548	ProperStrand	53	chr2	130101990	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	6	-19.3356
chr2	32011033	32011063	protein_coding	Prrc2b	intron	ENSMUSG00000039262	ProperStrand	344	chr17	66798457	66798473	protein_coding	1110012J17Rik	exon	ENSMUSG00000052105	NonProperStrand	38	1	-10.7353
chr9	26440743	26440759	DNA	MER5A	MER1_type	chr9MER5A26440741	ProperStrand	108	chr15	74788277	74788295	protein_coding	Ly6e	exon	ENSMUSG00000022587	ProperStrand	21	1	-14.2574
chr9	78327853	78327890	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr15	78173664	78173681	protein_coding	Csf2rb	intron	ENSMUSG00000071713	ProperStrand	16	1	-8.9956
chr4	148524481	148524530	protein_coding	Pgd	utr3	ENSMUSG00000028961	ProperStrand	34	chr5	130300424	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	7	-19.5637
chr1	36144882	36144939	protein_coding	Hs6st1	intron	ENSMUSG00000045216	ProperStrand	63	chr11	69483134	69483232	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.3670
chr18	10052132	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr2	144087324	144087430	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	4	-8.4653
chr5	121593018	121593035	protein_coding	Ptpn11	exon	ENSMUSG00000043733	ProperStrand	25	chr6	125136474	125136552	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	1	-8.1941
chr17	66466612	66466688	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-6.9868
chr1	187225266	187225356	protein_coding	Eprs	exon	ENSMUSG00000026615	NonProperStrand	3	chr11	6428076	6428166	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	NonProperStrand	91	1	-19.6691
chr4	149308837	149308890	protein_coding	Spsb1	intron	ENSMUSG00000039911	ProperStrand	15	chr1	168239525	168239541	protein_coding	Ildr2	exon	ENSMUSG00000040612	ProperStrand	103	1	-15.0598
chr6	124408737	124409255	protein_coding	Clstn3	exon	ENSMUSG00000008153	ProperStrand	10	chr11	97642973	97643053	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-5.8808
chr16	38642543	38642559	protein_coding	Arhgap31	intron	ENSMUSG00000022799	NonProperStrand	6	chr7	15208249	15208310	protein_coding	Vmn1r90	utr5	ENSMUSG00000041596	ProperStrand	3	1	-inf
chr4	43505698	43505778	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr1	136303034	136303634	protein_coding	Cyb5r1	exon	ENSMUSG00000026456	ProperStrand	12	1	-6.1793
chr4	140121137	140121153	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	chr5	114190004	114190119	protein_coding	Ficd	utr3	ENSMUSG00000053334	ProperStrand	1	1	-inf
chr8	126554400	126554490	protein_coding	Urb2	exon	ENSMUSG00000031976	ProperStrand	64	chr3	123210917	123210997	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.9622
chr10	119441034	119441051	protein_coding	Grip1	intron	ENSMUSG00000034813	ProperStrand	38	chr19	8963027	8963083	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.0700
chr14	63765479	63765540	protein_coding	Fdft1	utr3	ENSMUSG00000021273	ProperStrand	37	chr1	88247785	88247875	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	8	-21.7416
chr7	82600670	82600686	protein_coding	Akap13	intron	ENSMUSG00000066406	ProperStrand	80	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.7626
chr16	87861182	87861262	LTR	MTD	MaLR	chr16MTD87860969	NonProperStrand	1	chr16	87860660	87860750	LTR	MTE2a	MaLR	chr16MTE2a87860383	ProperStrand	1	1	-inf
chr8	119482977	119483002	protein_coding	Atmin	utr3	ENSMUSG00000047388	ProperStrand	26	chr16	23111418	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	5	-12.2104
chr5	108336375	108336455	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	chr13	90238633	90238723	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	1	-0.9535
chr4	69998582	70010182	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	chr15	80764672	80764714	protein_coding	Tnrc6b	utr3	ENSMUSG00000047888	ProperStrand	59	1	-8.1430
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr8	90404881	90404928	protein_coding	Zfp423	intron	ENSMUSG00000045333	ProperStrand	33	1	-7.0904
chr5	100855902	100855976	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr11	69492228	69492416	protein_coding	Senp3	exon	ENSMUSG00000005204	ProperStrand	65	1	-6.4794
chr18	54582045	54582062	lincRNA	9430076G02Rik	exon	ENSMUSG00000084814	ProperStrand	30	chr18	35714143	35714263	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.7548
chr12	104330679	104330695	protein_coding	Unc79	intron	ENSMUSG00000021198	NonProperStrand	25	chr4	132108975	132109015	protein_coding	Dnajc8	exon	ENSMUSG00000054405	ProperStrand	22	1	-17.0214
chr12	25597291	25597337	protein_coding	Mboat2	intron	ENSMUSG00000020646	ProperStrand	11	chr7	118219574	118219612	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-7.5402
chr5	65213457	65213483	protein_coding	Klf3	exon	ENSMUSG00000029178	ProperStrand	56	chr7	133941171	133941229	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	1	-8.4787
chr7	148633550	148633823	protein_coding	Rplp2	utr5	ENSMUSG00000025508	ProperStrand	106	chr5	65780762	65780802	protein_coding	Rpl9	exon	ENSMUSG00000047215	ProperStrand	113	1	-10.8989
chr17	3518646	3518674	protein_coding	Tiam2	exon	ENSMUSG00000023800	ProperStrand	6	chr16	23110986	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.7876
chr2	90235295	90235340	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	116798105	116798151	protein_coding	Cpsf6	exon	ENSMUSG00000055531	ProperStrand	86	1	-3.7834
chr18	33025512	33025612	protein_coding	Wdr36	exon	ENSMUSG00000038299	ProperStrand	28	chr1	162966002	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	4	-15.8596
chr19	5796427	5796482	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr19	44188368	44188419	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	2	-4.1191
chr4	117317857	117317947	protein_coding	Eri3	intron	ENSMUSG00000033423	ProperStrand	246	chr19	8798754	8798816	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	2	-3.9827
chrX	103398226	103398603	protein_coding	Pgk1	exon	ENSMUSG00000062070	ProperStrand	484	chr1	102076757	102076793	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	2	-8.6905
chr9	79618613	79618657	protein_coding	Tmem30a	utr3	ENSMUSG00000032328	ProperStrand	90	chr9	15119372	15119428	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	4	-13.8238
chr5	120648112	120648150	protein_coding	Rbm19	intron	ENSMUSG00000029594	ProperStrand	40	chr4	69884088	69884104	protein_coding	Cdk5rap2	utr3	ENSMUSG00000039298	ProperStrand	810	1	-8.9233
chr2	33875938	33875956	lincRNA	C230014O12Rik	exon	ENSMUSG00000087461	NonProperStrand	9	chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	1	-13.1564
chr17	5717560	5717634	protein_coding	Zdhhc14	intron	ENSMUSG00000034265	ProperStrand	10	chr16	23110506	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-13.9599
chr8	18882859	18882877	protein_coding	Agpat5	utr3	ENSMUSG00000031467	NonProperStrand	16	chr12	21329861	21329914	protein_coding	Adam17	utr3	ENSMUSG00000052593	ProperStrand	20	1	-18.0295
chr13	9833561	9833652	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr9	120860088	120860129	protein_coding	Ctnnb1	exon	ENSMUSG00000006932	ProperStrand	214	1	-2.6073
chr9	37327916	37327934	protein_coding	BC024479	intron	ENSMUSG00000042138	ProperStrand	17	chr16	23111739	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-13.7663
chr2	118611946	118611962	protein_coding	Disp2	exon	ENSMUSG00000040035	NonProperStrand	204	chr8	13876174	13876226	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-4.7488
chr3	52388277	52388294	SINE	B4A	B4	chr3B4A52388218	ProperStrand	169	chr2	22444730	22444793	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-5.7300
chr16	37777390	37777408	protein_coding	Fstl1	exon	ENSMUSG00000022816	ProperStrand	179	chr17	24857788	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-0.7436
chr8	26684064	26684237	protein_coding	Fgfr1	exon	ENSMUSG00000031565	ProperStrand	10	chr9	15119986	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-10.9040
chrX	68567940	68567957	protein_coding	Mtm1	utr3	ENSMUSG00000031337	ProperStrand	10	chr9	120039565	120039622	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-6.8270
chr18	73693107	73693191	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr11	68886928	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	11	-1.3568
chr4	133241629	133242164	protein_coding	Arid1a	exon	ENSMUSG00000007880	ProperStrand	465	chr10	80641696	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	1	-3.5851
chr2	158182156	158182182	lincRNA	9430008C03Rik	intron	ENSMUSG00000085385	ProperStrand	1039	chr2	90542538	90542606	protein_coding	Nup160	exon	ENSMUSG00000051329	ProperStrand	49	1	-8.0206
chr9	21934462	21934478	protein_coding	Acp5	exon	ENSMUSG00000001348	ProperStrand	66	chr1	152240140	152240601	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	1	-8.7171
chr2	20702623	20703448	protein_coding	Etl4	exon	ENSMUSG00000036617	ProperStrand	86	chr7	116664869	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.9511
chr19	52059473	52059492	LINE	Lx5	L1	chr19Lx552058808	ProperStrand	2	chr5	74489546	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	2	-inf
chr14	15581055	15582956	protein_coding	Slc4a7	exon	ENSMUSG00000021733	ProperStrand	24	chr14	76247731	76247811	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-5.9558
chr7	86981273	86983299	protein_coding	Anpep	exon	ENSMUSG00000039062	ProperStrand	9	chr18	35716832	35716877	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-5.7446
chr8	97352320	97353058	protein_coding	Ciapin1	exon	ENSMUSG00000031781	ProperStrand	24	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.0142
chr11	50628361	50628377	protein_coding	Zfp354c	exon	ENSMUSG00000044807	ProperStrand	21	chr8	73419732	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-5.1207
chr15	96422969	96440334	protein_coding	Slc38a1	exon	ENSMUSG00000023169	ProperStrand	69	chr7	52161068	52161142	protein_coding	Ap2a1	exon	ENSMUSG00000060279	ProperStrand	193	1	-10.6886
chr10	83903193	83903257	protein_coding	Nuak1	utr5	ENSMUSG00000020032	ProperStrand	12	chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	1	-11.7822
chr10	79326758	79326848	protein_coding	Ptbp1	utr3	ENSMUSG00000006498	ProperStrand	129	chr19	46836727	46836794	protein_coding	Cnnm2	exon	ENSMUSG00000064105	ProperStrand	18	1	-14.2181
chr4	131908357	131908457	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr7	117189861	117189930	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-0.9355
chr17	27771066	27771121	protein_coding	Rps10	exon	ENSMUSG00000052146	ProperStrand	94	chr19	8800373	8800422	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	3	-7.0652
chr1	69617227	69624435	protein_coding	Ikzf2	exon	ENSMUSG00000025997	ProperStrand	11	chr2	22445012	22445102	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-11.2318
chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	chr2	158182156	158182280	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-0.9980
chr2	26493365	26493489	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr4	116827121	116827187	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	6	-1.1662
chr7	139589102	139591719	protein_coding	Fgfr2	intron	ENSMUSG00000030849	NonProperStrand	95	chr5	108336363	108336490	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-6.7255
chr13	22132882	22132972	protein_coding	Hist1h4i	exon	ENSMUSG00000060639	ProperStrand	8	chr9	15119639	15119719	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-6.5261
chr17	46861595	46861611	protein_coding	Pex6	exon	ENSMUSG00000002763	ProperStrand	292	chr19	30249538	30249560	protein_coding	Gldc	exon	ENSMUSG00000024827	ProperStrand	175	1	-8.0013
chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	chr13	29042450	29042477	protein_coding	Sox4	utr3	ENSMUSG00000076431	ProperStrand	73	1	-6.5940
chr1	104888724	104888804	LTR	RLTR17	ERVK	chr1RLTR17104888662	NonProperStrand	1	chr1	104888561	104888651	LTR	RMER3D-int	ERVK	chr1RMER3D-int104888306	NonProperStrand	1	1	-inf
chr8	97347017	97347098	protein_coding	Ciapin1	exon	ENSMUSG00000031781	ProperStrand	24	chr17	35299506	35299596	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-6.5813
chr14	116765577	116765593	protein_coding	Gpc5	intron	ENSMUSG00000022112	ProperStrand	21	chr15	96202100	96202130	protein_coding	Arid2	exon	ENSMUSG00000033237	ProperStrand	34	1	-16.5781
chr9	114289120	114290747	protein_coding	Crtap	exon	ENSMUSG00000032431	ProperStrand	15	chr4	131908689	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.5353
chr7	148634700	148634797	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	chr14	63287574	63287611	snoRNA	ENSMUSG00000089531_SNORA73	.	ENSMUSG00000089531	ProperStrand	123	3	-6.9706
chr6	38645571	38645631	protein_coding	Hipk2	utr3	ENSMUSG00000061436	ProperStrand	7	chr8	73419657	73419706	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-12.0588
chr11	115883732	115883812	protein_coding	H3f3b	utr3	ENSMUSG00000016559	ProperStrand	76	chr4	131865403	131865493	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-3.5618
chr10	72437415	72437431	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr11	60523145	60523498	protein_coding	Llgl1	exon	ENSMUSG00000020536	ProperStrand	20	1	-10.5376
chr4	133927565	133927581	protein_coding	Extl1	exon	ENSMUSG00000028838	NonProperStrand	7	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-13.0159
chr13	90238701	90238723	protein_coding	Tmem167	intron	ENSMUSG00000012422	ProperStrand	11	chr13	90238600	90238700	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	1	-12.1076
chr5	111134058	111137008	protein_coding	Ep400	exon	ENSMUSG00000029505	ProperStrand	176	chr9	120039587	120039667	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.5213
chr9	78023109	78023169	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr8	10924953	10924969	protein_coding	3930402G23Rik	utr3	ENSMUSG00000038917	ProperStrand	13	2	-14.3123
chr16	57391625	57391690	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr19	8963077	8963180	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	2	-11.4964
chr14	52857347	52857371	protein_coding	Chd8	intron	ENSMUSG00000053754	ProperStrand	167	chr9	56107861	56107921	protein_coding	C230081A13Rik	exon	ENSMUSG00000074305	ProperStrand	40	1	-12.0785
chr17	47451623	47451713	protein_coding	Trerf1	exon	ENSMUSG00000064043	ProperStrand	56	chr12	112779178	112779258	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-4.9091
chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	chr11	106362557	106362634	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-3.9555
chr19	23216501	23216591	protein_coding	Klf9	exon	ENSMUSG00000033863	ProperStrand	83	chr12	88778639	88778719	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-5.8583
chr16	43353902	43353992	lincRNA	Gm9968	intron	ENSMUSG00000055370	ProperStrand	1	chr9	56261292	56261372	protein_coding	C230081A13Rik	intron	ENSMUSG00000074305	NonProperStrand	5	1	-inf
chrX	84483699	84483757	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr7	116663634	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	9	-2.5418
chr8	77633699	77633716	protein_coding	Mcm5	exon	ENSMUSG00000005410	ProperStrand	199	chr4	63211296	63211313	protein_coding	Atp6v1g1	utr3	ENSMUSG00000039105	NonProperStrand	24	1	-12.7633
chr19	41866445	41866484	protein_coding	Arhgap19	exon	ENSMUSG00000025154	ProperStrand	34	chr3	94303068	94303139	protein_coding	Snx27	utr3	ENSMUSG00000028136	ProperStrand	24	1	-16.2518
chr4	125390508	125390608	protein_coding	Grik3	utr3	ENSMUSG00000001985	ProperStrand	126	chr17	35089182	35089211	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-4.0611
chr8	13878162	13878180	protein_coding	Zfp828	exon	ENSMUSG00000047710	ProperStrand	32	chr11	62416600	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-10.3918
chr7	19628825	19628899	protein_coding	Sympk	exon	ENSMUSG00000023118	ProperStrand	43	chr19	8800358	8800448	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-6.9705
chr14	52703934	52704009	protein_coding	Hnrnpc	exon	ENSMUSG00000060373	ProperStrand	75	chr12	106269307	106269397	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-3.7220
chr15	101926286	101926932	protein_coding	Eif4b	utr3	ENSMUSG00000058655	ProperStrand	484	chr12	17552949	17553032	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	2	-2.6739
chr6	29156106	29156379	protein_coding	Impdh1	exon	ENSMUSG00000003500	ProperStrand	20	chr16	23110985	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.6223
chr16	87425888	87425952	protein_coding	Ltn1	exon	ENSMUSG00000052299	ProperStrand	49	chr1	162965551	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.6485
chr10	18038232	18038250	Low_complexity	GC_rich	Low_complexity	chr10GC_rich18038233	NonProperStrand	1	chr2	167434066	167434113	protein_coding	Gm20431	utr3	ENSMUSG00000089739	ProperStrand	81	1	-inf
chr14	11815938	11815957	protein_coding	Fhit	intron	ENSMUSG00000060579	ProperStrand	32	chr19	12173630	12173646	protein_coding	Olfr1427	exon	ENSMUSG00000067525	NonProperStrand	5	1	-19.1153
chr10	94573963	94573984	LTR	RLTR44C	ERVK	chr10RLTR44C94573708	NonProperStrand	1	chr8	74843854	74843947	protein_coding	Klf2	exon	ENSMUSG00000055148	NonProperStrand	8	1	-inf
chr16	55970260	55971485	protein_coding	Rpl24	exon	ENSMUSG00000022601	ProperStrand	149	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-7.5532
chr14	31832163	31832216	protein_coding	Gnl3	utr5	ENSMUSG00000042354	ProperStrand	53	chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	1	-9.7382
chr6	89292592	89292658	protein_coding	Plxna1	exon	ENSMUSG00000030084	ProperStrand	233	chr16	23111371	23111460	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-0.9445
chr3	146082190	146082255	protein_coding	Ssx2ip	exon	ENSMUSG00000036825	ProperStrand	19	chr16	23110967	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7016
chr11	78075348	78075407	protein_coding	2610507B11Rik	utr5	ENSMUSG00000010277	ProperStrand	246	chr18	33954909	33954948	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-1.1952
chr6	48581680	48581696	lincRNA	AI854703	exon	ENSMUSG00000053297	ProperStrand	11	chr9	120038564	120038607	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-10.3728
chr5	151463927	151464017	protein_coding	N4bp2l2	exon	ENSMUSG00000029655	ProperStrand	10	chr16	23111374	23111454	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.3721
chr14	32989662	32989685	protein_coding	Ncoa4	exon	ENSMUSG00000056234	ProperStrand	15	chr19	8798479	8798554	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-12.8262
chr7	30231499	30231589	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	chr9	120037995	120038054	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	5	-6.0397
chr11	96679441	96679523	protein_coding	Nfe2l1	utr3	ENSMUSG00000038615	ProperStrand	118	chr9	15119643	15119704	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.5373
chr11	98554925	98554954	protein_coding	Psmd3	exon	ENSMUSG00000017221	ProperStrand	51	chr17	35087894	35087944	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-5.5173
chr18	35097361	35112058	protein_coding	Hspa9	utr3	ENSMUSG00000024359	ProperStrand	166	chr11	97642952	97643019	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-3.0776
chr4	129011742	129011822	protein_coding	Rbbp4	exon	ENSMUSG00000057236	ProperStrand	22	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.0882
chr7	130406438	130406498	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	chr9	122075466	122075482	protein_coding	Snrk	exon	ENSMUSG00000038145	NonProperStrand	97	1	-11.6013
chr17	35972446	35972536	protein_coding	Tubb5	exon	ENSMUSG00000001525	ProperStrand	624	chr11	55296257	55296333	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-1.8831
chr15	33151809	33151897	protein_coding	Pgcp	intron	ENSMUSG00000039007	ProperStrand	9	chr7	150717334	150717424	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-9.3491
chr1	88247755	88247868	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	chr4	56910504	56910588	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	6	-1.9285
chr2	125548901	125548917	protein_coding	Shc4	exon	ENSMUSG00000035109	ProperStrand	19	chr2	26494823	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.2936
chrX	132673816	132673833	protein_coding	Bex4	intron	ENSMUSG00000047844	NonProperStrand	70	chr11	69481335	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-2.9243
chr17	29042963	29042980	antisense	1700030A11Rik	.	ENSMUSG00000085333	ProperStrand	17	chr16	90386835	90386853	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	1	-14.7926
chr17	7413835	7413886	protein_coding	Rps6ka2	intron	ENSMUSG00000023809	ProperStrand	47	chr18	35716810	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-9.3020
chr7	104220984	104221056	SINE	ID_B1	B4	chr7ID_B1104220995	ProperStrand	3	chr13	96100643	96100692	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	3	-inf
chr4	96412508	96412526	protein_coding	Gm12695	intron	ENSMUSG00000078639	ProperStrand	110	chr18	35716682	35716761	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.2494
chr1	162967515	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	chr17	35384171	35384195	snoRNA	ENSMUSG00000065273_SNORD83	.	ENSMUSG00000065273	ProperStrand	244	1	-1.1834
chr17	35272237	35272253	protein_coding	Bag6	utr5	ENSMUSG00000024392	ProperStrand	181	chr1	89673643	89673787	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-1.4363
chr11	98867464	98868356	protein_coding	Top2a	exon	ENSMUSG00000020914	ProperStrand	324	chr19	8799606	8799644	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-3.5224
chr5	35002640	35002657	protein_coding	Nop14	exon	ENSMUSG00000036693	NonProperStrand	5	chr5	121655032	121655062	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-8.7807
chr5	123244474	123249384	protein_coding	Anapc5	exon	ENSMUSG00000029472	ProperStrand	92	chr19	8800114	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-6.7586
chr18	57514476	57514499	protein_coding	Prrc1	utr5	ENSMUSG00000024594	NonProperStrand	22	chr18	33954818	33954908	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-5.4296
chr17	32338056	32338146	protein_coding	Brd4	exon	ENSMUSG00000024002	ProperStrand	121	chr17	28467475	28467546	protein_coding	Rpl10a	exon	ENSMUSG00000037805	ProperStrand	121	1	-10.4961
chr17	23955821	23955839	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	chr2	26494708	26494754	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-2.9427
chr6	125112117	125112299	protein_coding	Gapdh	exon	ENSMUSG00000057666	ProperStrand	356	chr5	121655127	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-0.8944
chr17	45706678	45707247	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr5	125486846	125486862	protein_coding	Fam101a	intron	ENSMUSG00000037962	ProperStrand	9	3	-inf
chr19	55173168	55173185	protein_coding	Gpam	intron	ENSMUSG00000024978	NonProperStrand	1	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-inf
chr7	25866348	25866372	protein_coding	Zfp574	exon	ENSMUSG00000045252	ProperStrand	14	chr16	23111372	23111446	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.7143
chr5	110549420	110549436	protein_coding	Zfp605	intron	ENSMUSG00000023284	NonProperStrand	2	chr9	15119631	15119693	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-9.8289
chr11	101417562	101420879	protein_coding	Nbr1	exon	ENSMUSG00000017119	NonProperStrand	4	chr10	39978412	39978483	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	NonProperStrand	27	1	-21.1740
chr17	17975208	17975225	protein_coding	Ncrna00085	intron	ENSMUSG00000080316	ProperStrand	2	chr7	117166726	117166743	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-12.2088
chr6	142439080	142439096	protein_coding	Ldhb	exon	ENSMUSG00000030246	NonProperStrand	63	chr2	26494793	26494826	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.0195
chr5	124059280	124059298	protein_coding	Clip1	exon	ENSMUSG00000049550	NonProperStrand	3	chr16	23110913	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr1	132346137	132349020	protein_coding	Cd55	exon	ENSMUSG00000026399	ProperStrand	7	chr12	17553062	17553091	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-9.4553
chr8	73312146	73312236	protein_coding	Mast3	exon	ENSMUSG00000031833	ProperStrand	23	chrX	71517825	71517905	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-8.4683
chr7	25864925	25864961	protein_coding	Zfp574	exon	ENSMUSG00000045252	ProperStrand	14	chr19	46080183	46080199	protein_coding	Hps6	exon	ENSMUSG00000074811	NonProperStrand	45	1	-16.9247
chr1	10127858	10127958	protein_coding	Arfgef1	utr3	ENSMUSG00000067851	ProperStrand	54	chr10	23505559	23505621	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-7.7605
chr2	59794203	59794248	protein_coding-noncoding	Baz2b	utr3	ENSMUSG00000026987	ProperStrand	3	chr11	97642980	97643072	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-inf
chr10	7383389	7383405	protein_coding	Pcmt1	utr5	ENSMUSG00000019795	ProperStrand	55	chr1	135600448	135600478	protein_coding	Atp2b4	utr3	ENSMUSG00000026463	ProperStrand	42	1	-14.2019
chr5	74489216	74489306	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	5	-9.8982
chr2	120996749	120996766	protein_coding	Tubgcp4	intron	ENSMUSG00000027263	ProperStrand	30	chr3	35987484	35987507	protein_coding	Acad9	exon	ENSMUSG00000027710	ProperStrand	11	1	-17.9580
chr6	97112810	97112834	snoRNA	ENSMUSG00000065728_SNORA36	.	ENSMUSG00000065728	NonProperStrand	1	chr7	29136555	29136638	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	NonProperStrand	27	1	-inf
chr8	73419656	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	chr4	116828379	116828436	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	4	-1.0460
chr16	23110987	23111010	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr17	24856714	24856753	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-2.4042
chrX	12671248	12675594	protein_coding	Usp9x	exon	ENSMUSG00000031010	ProperStrand	174	chr15	34370545	34370617	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	7	-13.5830
chr4	43505805	43505930	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr7	134934931	134934963	protein_coding	Setd1a	exon	ENSMUSG00000042308	ProperStrand	58	5	-13.7337
chr10	21322973	21322990	protein_coding	1700020N01Rik	intron	ENSMUSG00000050844	ProperStrand	12	chr7	117189945	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	6	-inf
chr9	22137272	22137372	protein_coding	Anln	utr3	ENSMUSG00000036777	ProperStrand	133	chr1	162967531	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-2.0874
chr15	77597977	77597993	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr1	182828542	182828602	protein_coding	Lefty2	utr3	ENSMUSG00000066652	ProperStrand	48	1	-9.2561
chr5	74489202	74489617	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr8	129468746	129468869	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	9	-1.3041
chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	chr2	22444484	22444518	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	2	-3.3671
chr11	113754863	113754880	protein_coding	Sdk2	exon	ENSMUSG00000041592	ProperStrand	17	chr7	52714554	52714588	protein_coding	Ftl1	exon	ENSMUSG00000050708	ProperStrand	807	1	-10.6710
chr13	68759738	68764669	protein_coding	Adcy2	exon	ENSMUSG00000021536	ProperStrand	237	chr17	46874168	46874215	protein_coding	Cnpy3	exon	ENSMUSG00000023973	ProperStrand	85	1	-9.8593
chr5	137436135	137436166	protein_coding	Fis1	intron	ENSMUSG00000019054	ProperStrand	12	chr4	116991019	116991036	protein_coding	Rnf220	intron	ENSMUSG00000028677	ProperStrand	131	1	-15.0290
chr6	135330247	135331008	protein_coding	Emp1	exon	ENSMUSG00000030208	ProperStrand	13	chr18	35714145	35714235	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	10	-inf
chr8	112196366	112196383	protein_coding	2400003C14Rik	exon	ENSMUSG00000031729	ProperStrand	30	chr4	131865866	131865968	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.9337
chr8	98388245	98388303	protein_coding	Got2	utr3	ENSMUSG00000031672	ProperStrand	85	chr3	19528533	19528550	protein_coding	1700064H15Rik	exon	ENSMUSG00000082766	NonProperStrand	78	1	-12.0857
chr8	108222857	108223329	protein_coding	Acd	exon	ENSMUSG00000038000	ProperStrand	5	chr16	23110982	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr12	70825673	70825690	protein_coding	L2hgdh	exon	ENSMUSG00000020988	ProperStrand	8	chr4	57154472	57154489	protein_coding	Epb4.1l4b	intron	ENSMUSG00000028434	NonProperStrand	54	1	-17.5126
chr12	82050003	82050077	protein_coding-noncoding	Srsf5	utr5	ENSMUSG00000021134	ProperStrand	10	chr9	15119706	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-6.0614
chr8	109936836	109936901	protein_coding	Nob1	exon	ENSMUSG00000003848	ProperStrand	28	chr18	35716832	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-6.0107
chr12	106455793	106455834	protein_coding	Tcl1	utr3	ENSMUSG00000041359	ProperStrand	27	chr11	98878344	98878456	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	4	-19.5362
chr8	89925713	89925803	LINE	L1_Rod	L1	chr8L1_Rod89924423	NonProperStrand	2	chr8	89925972	89926052	LTR	ORR1A2	MaLR	chr8ORR1A289925965	ProperStrand	1	1	-inf
chr7	148879534	148879552	protein_coding	Muc2	exon	ENSMUSG00000025515	ProperStrand	1	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-inf
chr7	51781726	51781744	protein_coding	Spib	utr3	ENSMUSG00000008193	NonProperStrand	14	chr3	63719654	63724190	protein_coding	E130311K13Rik	exon	ENSMUSG00000048581	ProperStrand	3	1	-inf
chr5	67076030	67078110	protein_coding	Uchl1	exon	ENSMUSG00000029223	ProperStrand	29	chr18	73693162	73693184	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	2	-11.2418
chr9	120037910	120038029	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	chr9	64022893	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	2	-1.1299
chr5	99987915	99987931	protein_coding	A930011G23Rik	exon	ENSMUSG00000089809	NonProperStrand	43	chr19	8798484	8798516	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-5.8641
chr18	41356147	41356185	miRNA	Mir5097	dead	ENSMUSG00000093361	ProperStrand	221	chr9	106077213	106077278	protein_coding	Wdr82	intron	ENSMUSG00000020257	ProperStrand	34	2	-18.2350
chr4	19581017	19581037	protein_coding	Wwp1	intron	ENSMUSG00000041058	NonProperStrand	4	chr5	121655016	121655098	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	NonProperStrand	38	1	-19.4518
chr2	129968964	129968980	protein_coding	Tgm6	exon	ENSMUSG00000027403	ProperStrand	3	chr17	24857716	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	NonProperStrand	27	1	-21.2276
chr4	154023804	154023822	lincRNA	Gm13110	intron	ENSMUSG00000086810	NonProperStrand	5	chr7	34917819	34917871	protein_coding	Wtip	exon	ENSMUSG00000036459	ProperStrand	19	1	-19.2987
chr19	3904233	3904250	protein_coding	Tcirg1	exon	ENSMUSG00000001750	ProperStrand	77	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.8297
chr4	148324768	148324868	protein_coding	Casz1	intron	ENSMUSG00000028977	NonProperStrand	23	chr7	51503494	51503548	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	2	-16.5855
chr7	57041565	57041581	protein_coding	Prmt3	exon	ENSMUSG00000030505	ProperStrand	89	chr16	23111384	23111418	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.7670
chr9	67106269	67106289	protein_coding	Tln2	exon	ENSMUSG00000052698	ProperStrand	79	chr7	116664802	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.0879
chr13	61435394	61435484	LINE	L1Md_A	L1	chr13L1Md_A61431704	ProperStrand	1	chrX	62252991	62253071	LINE	L1Md_A	L1	chrXL1Md_A62249180	ProperStrand	1	1	-inf
chr7	118225547	118225588	protein_coding	Eif4g2	utr5	ENSMUSG00000005610	ProperStrand	134	chr19	8799043	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-4.2807
chr17	36020252	36020268	protein_coding	Dhx16	exon	ENSMUSG00000024422	NonProperStrand	1	chr11	116938630	116938720	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	NonProperStrand	2	1	-inf
chr14	80155865	80155955	LTR	MLT2B2	ERVL	chr14MLT2B280155840	ProperStrand	1	chr14	80156070	80156150	LTR	MLT2B2	ERVL	chr14MLT2B280156091	ProperStrand	1	1	-inf
chr2	98174031	98174048	LTR	IAPLTR3-int	ERVK	chr2IAPLTR3-int98170118	ProperStrand	37	chr5	110666796	110666812	protein_coding	Ankle2	exon	ENSMUSG00000029501	NonProperStrand	4	1	-18.9976
chr6	39349177	39349267	protein_coding	Mkrn1	utr3	ENSMUSG00000029922	ProperStrand	177	chr1	89681244	89681324	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-3.3901
chr11	116016402	116016419	protein_coding	Fbf1	exon	ENSMUSG00000020776	NonProperStrand	36	chr11	62416601	62416654	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-6.1698
chr11	56852583	56852601	protein_coding	Gria1	intron	ENSMUSG00000020524	ProperStrand	10	chr17	24857716	24857775	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-5.6778
chr11	55049240	55049320	protein_coding	Slc36a1	utr3	ENSMUSG00000020261	ProperStrand	11	chr7	117189971	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-6.6445
chr5	117733416	117735761	protein_coding	Pebp1	exon	ENSMUSG00000032959	ProperStrand	54	chr11	59778161	59778177	protein_coding	Rasd1	exon	ENSMUSG00000049892	NonProperStrand	49	1	-13.9383
chr5	130339131	130339201	protein_coding	Sumf2	utr3	ENSMUSG00000025538	ProperStrand	20	chr17	13117241	13117278	protein_coding	Tcp1	exon	ENSMUSG00000068039	ProperStrand	116	1	-14.2172
chr14	27445042	27445102	protein_coding	Fam116a	intron	ENSMUSG00000040818	ProperStrand	23	chr1	7143478	7143508	protein_coding	Pcmtd1	intron	ENSMUSG00000051285	ProperStrand	19	1	-17.4536
chr11	78300852	78300870	protein_coding	Sarm1	exon	ENSMUSG00000050132	NonProperStrand	13	chr11	106362304	106362341	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-8.9235
chr14	65696825	65696913	protein_coding	Extl3	utr5	ENSMUSG00000021978	ProperStrand	36	chr7	116663644	116663734	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.4225
chr2	179322377	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr1	89681146	89681397	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	4	-11.5066
chr10	117128256	117129639	protein_coding	Mdm2	exon	ENSMUSG00000020184	ProperStrand	17	chr16	23110987	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.8783
chr7	52382247	52382315	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	chr19	8799841	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	2	-1.5941
chr2	90235299	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	36352997	36353014	pseudogene	Gm5682	.	ENSMUSG00000092265	ProperStrand	1	1	-inf
chr4	77957002	77957020	LINE	Lx6	L1	chr4Lx677956774	ProperStrand	16	chr9	120038609	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.5625
chr5	147616125	147616142	LTR	MTE2b	MaLR	chr5MTE2b147616094	NonProperStrand	2	chr6	87793935	87793954	protein_coding	Cnbp	utr3	ENSMUSG00000030057	ProperStrand	46	1	-inf
chr10	83990168	83990215	protein_coding	Ckap4	utr3	ENSMUSG00000046841	ProperStrand	60	chr5	108334226	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-4.8200
chr4	109360778	109360795	protein_coding	Faf1	intron	ENSMUSG00000010517	NonProperStrand	5	chr8	73419656	73419742	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-8.1065
chr4	148530750	148530797	protein_coding	Pgd	exon	ENSMUSG00000028961	ProperStrand	34	chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	1	-10.3326
chr1	162967115	162967165	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	chr17	35087895	35087962	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-1.1862
chr2	156320720	156360462	protein_coding	Epb4.1l1	exon	ENSMUSG00000027624	ProperStrand	27	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.3280
chr11	120425191	120429268	protein_coding	P4hb	exon	ENSMUSG00000025130	ProperStrand	83	chrX	91435169	91435188	protein_coding	Eif2s3x	utr3	ENSMUSG00000035150	NonProperStrand	83	1	-12.0082
chr15	76371908	76371925	protein_coding	Slc52a2	utr3	ENSMUSG00000022560	NonProperStrand	25	chr18	35716831	35716867	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.7263
chr16	17096824	17096864	protein_coding	Ppil2	exon	ENSMUSG00000022771	ProperStrand	6	chr15	98350193	98350283	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-9.4488
chr12	111933861	111934473	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr11	62418016	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-1.1507
chr12	104004026	104004510	protein_coding	Ubr7	exon	ENSMUSG00000041712	ProperStrand	46	chr17	24857717	24857747	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.7531
chr7	20036905	20036921	protein_coding	Mark4	exon	ENSMUSG00000030397	NonProperStrand	45	chr10	127521241	127521271	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	1	-9.3721
chr12	87193679	87239976	protein_coding	Ttll5	intron	ENSMUSG00000012609	ProperStrand	23	chr16	23110864	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-6.1604
chr11	102063552	102063568	protein_coding	Hdac5	exon	ENSMUSG00000008855	NonProperStrand	39	chr4	117930155	117930252	protein_coding	Ptprf	exon	ENSMUSG00000033295	ProperStrand	337	2	-16.8562
chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr12	70259702	70260074	protein_coding	Rps29	utr5	ENSMUSG00000034892	ProperStrand	124	7	-19.6857
chr14	54988091	54988107	protein_coding	Oxa1l	exon	ENSMUSG00000000959	ProperStrand	31	chr11	69483195	69483237	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.6332
chr13	45504056	45504075	protein_coding	Mylip	exon	ENSMUSG00000038175	ProperStrand	39	chr11	48614367	48614421	snoRNA	ENSMUSG00000064500_SNORD95	.	ENSMUSG00000064500	ProperStrand	100	1	-13.1587
chr6	54379743	54379760	lincRNA	9130019P16Rik	exon	ENSMUSG00000073067	ProperStrand	255	chr1	127290244	127290262	protein_coding	Actr3	utr3	ENSMUSG00000026341	ProperStrand	45	1	-10.9922
chr9	40612831	40612911	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	chr4	131865380	131865856	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	23	-22.9099
chrX	102999132	102999187	protein_coding	Atrx	exon	ENSMUSG00000031229	ProperStrand	54	chr11	69483136	69483226	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-4.6189
chr1	193410429	193410519	protein_coding	Ints7	exon	ENSMUSG00000037461	ProperStrand	108	chr5	21478747	21482072	protein_coding	Reln	exon	ENSMUSG00000042453	NonProperStrand	7	1	-16.5963
chr6	125628079	125628789	protein_coding	Vwf	exon	ENSMUSG00000001930	ProperStrand	20	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-11.2037
chr2	4974190	4974207	protein_coding	Optn	exon	ENSMUSG00000026672	ProperStrand	451	chr4	117898809	117898878	protein_coding	Ptprf	exon	ENSMUSG00000033295	ProperStrand	337	1	-5.8514
chr1	196861544	196861561	lincRNA	A330023F24Rik	exon	ENSMUSG00000073474	ProperStrand	6	chr4	122970392	122970471	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-12.1637
chr2	158182156	158182181	lincRNA	9430008C03Rik	intron	ENSMUSG00000085385	NonProperStrand	4	chr2	158182206	158182280	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	NonProperStrand	8	3	-19.3380
chr13	75905622	75905650	protein_coding	Ell2	intron	ENSMUSG00000001542	ProperStrand	110	chr4	131865855	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.8518
chr7	67123694	67123714	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	chr7	116664794	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-1.0176
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	4	-1.2423
chr3	103766705	103766721	protein_coding	Rsbn1	utr3	ENSMUSG00000044098	NonProperStrand	17	chr16	23110890	23110981	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-3.4874
chr7	26533382	26535901	protein_coding	Hnrnpul1	exon	ENSMUSG00000040725	ProperStrand	84	chr7	118219574	118219603	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-3.5420
chr11	116299671	116299738	protein_coding	Fam100b	utr3	ENSMUSG00000050628	ProperStrand	97	chr4	131908300	131908344	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	7	-8.7907
chr17	45707281	45707315	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr5	34234246	34234262	protein_coding	Whsc1	utr5	ENSMUSG00000057406	ProperStrand	409	1	-3.0678
chr11	101489691	101489719	protein_coding	Rdm1	exon	ENSMUSG00000010362	ProperStrand	28	chr4	131908236	131908293	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.6458
chr4	115449869	115449900	protein_coding	4732418C07Rik	utr3	ENSMUSG00000034210	ProperStrand	16	chr5	130300490	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.9748
chr14	31829399	31829424	snoRNA	ENSMUSG00000077797_Snord19	.	ENSMUSG00000077797	ProperStrand	62	chr12	106269284	106269384	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-4.0783
chr2	179322378	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr5	107303155	107303171	protein_coding	Hfm1	intron	ENSMUSG00000043410	ProperStrand	23	1	-13.1521
chr2	90854674	90857805	protein_coding	Celf1	utr3	ENSMUSG00000005506	NonProperStrand	28	chr4	131865855	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-5.3074
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr18	89387605	89387621	protein_coding	Cd226	intron	ENSMUSG00000034028	ProperStrand	47	1	-4.9327
chr14	26516960	26516999	protein_coding-noncoding	Ppif	utr5	ENSMUSG00000021868	ProperStrand	2	chr14	8657233	8657315	protein_coding	Flnb	intron	ENSMUSG00000025278	ProperStrand	124	1	-20.8924
chr2	90235294	90235325	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr14	99453832	99453912	protein_coding	6720463M24Rik	intron	ENSMUSG00000022070	ProperStrand	23	2	-10.3183
chr11	117591333	117591406	protein_coding	Tnrc6c	intron	ENSMUSG00000025571	ProperStrand	51	chr15	98908727	98909277	protein_coding	Troap	exon	ENSMUSG00000032783	ProperStrand	5	1	-18.7776
chr6	134198639	134198739	protein_coding	Etv6	exon	ENSMUSG00000030199	ProperStrand	46	chr1	162967139	162967178	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	1	-9.2132
chr7	25774662	25774835	protein_coding	Atp1a3	exon	ENSMUSG00000040907	ProperStrand	66	chr11	69483136	69483187	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-4.0783
chr5	141234575	141234665	protein_coding	Gna12	utr3	ENSMUSG00000000149	ProperStrand	54	chr7	116663650	116663730	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.6939
chr4	5568979	5568995	lincRNA	4930423M02Rik	exon	ENSMUSG00000086066	ProperStrand	7	chr14	76247711	76247836	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-8.4963
chr11	86325326	86326334	protein_coding	Rps6kb1	exon	ENSMUSG00000020516	ProperStrand	16	chr16	56035947	56036001	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	1	-11.6287
chr2	163268043	163268061	protein_coding	Gdap1l1	intron	ENSMUSG00000017943	NonProperStrand	30	chr4	131865853	131865937	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.9337
chr10	75322176	75322272	protein_coding	Mif	utr3	ENSMUSG00000033307	ProperStrand	146	chr6	71832550	71832577	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-3.9063
chr1	174049029	174049058	protein_coding	Copa	exon	ENSMUSG00000026553	ProperStrand	33	chr11	69483136	69483269	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-6.0065
chr10	127521126	127521374	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr8	73419657	73419731	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	4	-1.3795
mmu-miR-294-3p	0	22	miRNA	mmu-miR-294-3p	.	mmu-miR-294-3p	ProperStrand	35	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-4.6236
chr9	57369188	57369214	protein_coding	Cox5a	exon	ENSMUSG00000000088	ProperStrand	26	chr6	83318070	83318086	protein_coding	Tet3	exon	ENSMUSG00000034832	NonProperStrand	93	1	-14.1251
chr7	30124062	30124153	protein_coding	Sipa1l3	exon	ENSMUSG00000030583	ProperStrand	559	chr7	52381973	52382009	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-2.5073
chr18	12314169	12314214	protein_coding	Riok3	utr3	ENSMUSG00000024404	ProperStrand	38	chr14	37875053	37875069	protein_coding	Lrit1	exon	ENSMUSG00000041044	NonProperStrand	11	1	-17.5665
chr15	41620675	41620692	protein_coding	Oxr1	exon	ENSMUSG00000022307	ProperStrand	21	chr2	130102055	130102103	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-7.4446
chr11	94098976	94098992	protein_coding	Wfikkn2	exon	ENSMUSG00000044177	ProperStrand	19	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.7782
chr7	35216701	35216718	LINE	L1M4b	L1	chr7L1M4b35216550	ProperStrand	31	chr7	118219594	118219644	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-5.4472
chr3	54497026	54497127	protein_coding	Fam48a	utr5	ENSMUSG00000027751	ProperStrand	16	chr5	66754321	66754339	protein_coding	Apbb2	intron	ENSMUSG00000029207	NonProperStrand	14	1	-19.6230
chr13	58400751	58400770	protein_coding	Kif27	intron	ENSMUSG00000060176	ProperStrand	75	chr17	39985560	39985661	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-5.4949
chr1	120579273	120579363	protein_coding	Tfcp2l1	utr3	ENSMUSG00000026380	ProperStrand	158	chr7	116664811	116664891	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.0692
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr5	33361496	33361512	protein_coding	Ywhah	utr5	ENSMUSG00000018965	NonProperStrand	2	1	-16.1911
chr14	51427281	51427347	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr4	46690469	46690485	protein_coding	Gabbr2	exon	ENSMUSG00000039809	ProperStrand	6	1	-11.9562
chr10	127798577	127798597	protein_coding	Cs	utr3	ENSMUSG00000005683	ProperStrand	63	chr16	23110455	23110517	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.3788
chr10	26334223	26334240	LTR	MuRRS4-int	ERV1	chr10MuRRS4-int26334192	NonProperStrand	1	chr11	106362568	106362635	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-inf
chr12	73234415	73234473	protein_coding	4930403N07Rik	intron	ENSMUSG00000021086	NonProperStrand	10	chr7	148634765	148634839	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-7.5437
chr10	89083651	89083667	protein_coding	Slc17a8	utr5	ENSMUSG00000019935	NonProperStrand	13	chr2	25197231	25198754	protein_coding	Man1b1	exon	ENSMUSG00000036646	NonProperStrand	1	1	-inf
chr11	68768015	68768031	protein_coding	Arhgef15	exon	ENSMUSG00000052921	NonProperStrand	21	chr4	131866608	131866659	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	1	-11.2301
chr15	41012216	41012234	LTR	RLTR13C1	ERVK	chr15RLTR13C141011883	NonProperStrand	1	chr7	30074412	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-inf
chr6	128307760	128307819	protein_coding	5930416I19Rik	exon	ENSMUSG00000048668	ProperStrand	3	chr16	23110539	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-14.4518
chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	chr14	31827478	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	2	-4.9003
chr8	49375414	49375468	protein_coding	Odz3	intron	ENSMUSG00000031561	ProperStrand	56	chr2	26768415	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-5.7369
chr6	42314662	42314848	protein_coding	Epha1	exon	ENSMUSG00000029859	ProperStrand	16	chr1	162967520	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	3	-14.0900
chr17	43202524	43202541	protein_coding	Tnfrsf21	intron	ENSMUSG00000023915	ProperStrand	36	chr11	62416574	62416621	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-6.1698
chr11	116985040	116985057	protein_coding	Sec14l1	intron	ENSMUSG00000020823	NonProperStrand	5	chr17	24360898	24360950	protein_coding	Ccnf	exon	ENSMUSG00000072082	ProperStrand	149	2	-19.7760
chr3	108187083	108187171	protein_coding	Psrc1	utr5	ENSMUSG00000068744	ProperStrand	38	chr18	33954825	33954915	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-7.2959
chr11	98551784	98551874	protein_coding	Psmd3	exon	ENSMUSG00000017221	ProperStrand	51	chr17	24857728	24857808	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.5733
chr13	112277863	112277889	protein_coding	Gpbp1	utr5	ENSMUSG00000032745	ProperStrand	85	chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	1	-8.4903
chr17	32450559	32450596	protein_coding	Akap8	intron	ENSMUSG00000024045	ProperStrand	339	chr17	28465915	28465953	protein_coding	Rpl10a	exon	ENSMUSG00000037805	ProperStrand	121	1	-8.4394
chr11	105207845	105208073	protein_coding	Mrc2	exon	ENSMUSG00000020695	ProperStrand	12	chr6	94776852	94776875	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	1	-12.3819
chr10	58005498	58005534	protein_coding	Ccdc138	intron	ENSMUSG00000038010	ProperStrand	9	chr7	116663677	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-6.1447
chr10	127042949	127045080	protein_coding	Lrp1	exon	ENSMUSG00000040249	ProperStrand	151	chr11	97642952	97642992	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	7	-10.2540
chr15	78920125	78920205	protein_coding	Eif3l	exon	ENSMUSG00000033047	ProperStrand	81	chr4	131866179	131866269	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-3.1168
chr7	4978453	4978492	protein_coding	Zfp865	intron	ENSMUSG00000074405	ProperStrand	15	chr10	23505152	23505236	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.5481
chr7	66565583	66565605	LINE	L1MB7	L1	chr7L1MB766565207	NonProperStrand	1	chr17	39985296	39985369	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-inf
chr7	52027213	52027309	protein_coding	Vrk3	intron	ENSMUSG00000002205	ProperStrand	22	chrX	34623002	34623037	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	3	-12.0674
chr14	15599264	15599297	protein_coding	Slc4a7	exon	ENSMUSG00000021733	ProperStrand	24	chr11	69483136	69483187	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.1173
chr8	110366798	110366814	LTR	MERVL_2A-int	ERVL	chr8MERVL_2A-int110366677	ProperStrand	1	mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	1	-inf
chr1	71670901	71686930	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr7	52381972	52382013	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	2	-3.0983
chr18	80637799	80637819	protein_coding	Ctdp1	intron	ENSMUSG00000033323	ProperStrand	69	chr10	23505152	23505205	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.0487
chr7	134279089	134279131	protein_coding	Spn	utr3	ENSMUSG00000051457	ProperStrand	9	chr11	98878344	98878396	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-10.1442
chr2	130540532	130540565	protein_coding	4930402H24Rik	intron	ENSMUSG00000027309	ProperStrand	16	chr16	23111372	23111447	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.4608
chr4	126002187	126002204	protein_coding	Tekt2	utr5	ENSMUSG00000028845	ProperStrand	31	chr16	23110840	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0062
chr7	119982935	119982992	protein_coding	Tead1	exon	ENSMUSG00000055320	ProperStrand	217	chr7	117189897	117189987	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-1.2361
chr15	84933019	84933078	protein_coding	Smc1b	intron	ENSMUSG00000022432	ProperStrand	11	chr16	23110961	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-7.2041
chr5	74489202	74489292	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr4	128295755	128295772	protein_coding	Tlr12	utr5	ENSMUSG00000062545	NonProperStrand	8	1	-9.7175
chr7	13616212	13616249	protein_coding	Trim28	utr3	ENSMUSG00000005566	ProperStrand	296	chr10	117227045	117227061	protein_coding	Nup107	exon	ENSMUSG00000052798	NonProperStrand	66	1	-9.9231
chr4	134424057	134424137	protein_coding	Rhd	intron	ENSMUSG00000028825	NonProperStrand	2	chr6	67431902	67431992	protein_coding	Il23r	intron	ENSMUSG00000049093	NonProperStrand	2	1	-inf
chr13	59901327	59901417	protein_coding	Zcchc6	exon	ENSMUSG00000035248	ProperStrand	23	chr9	15119668	15119748	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	6	-19.2915
chr2	117650523	117650539	lincRNA	4930412B13Rik	exon	ENSMUSG00000086221	ProperStrand	4	chr16	23110907	23110954	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-8.2228
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr11	6428035	6428157	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	8	-1.4482
chr19	47970971	47970987	protein_coding	Itprip	utr3	ENSMUSG00000079254	ProperStrand	75	chr11	55296276	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-5.7413
chr5	108330916	108331088	protein_coding	Rpl5	exon	ENSMUSG00000058558	ProperStrand	235	chr11	116938558	116938638	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-3.5446
chr9	123425934	123426034	protein_coding	Limd1	exon	ENSMUSG00000025239	ProperStrand	3	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-9.8112
chr7	25670520	25670559	protein_coding	Rps19	exon	ENSMUSG00000040952	ProperStrand	101	chr10	90581034	90581083	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-3.8192
chr11	52216821	52216837	protein_coding	9530068E07Rik	exon	ENSMUSG00000036275	ProperStrand	13	chr4	63211296	63211313	protein_coding	Atp6v1g1	utr3	ENSMUSG00000039105	NonProperStrand	24	1	-18.3408
chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	chr1	193543370	193543409	protein_coding	Lpgat1	exon	ENSMUSG00000026623	ProperStrand	31	1	-11.0901
chr6	125112098	125112303	protein_coding	Gapdh	exon	ENSMUSG00000057666	ProperStrand	356	chr14	33005095	33005139	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-1.0571
chr8	74988185	74993796	protein_coding	Cherp	exon	ENSMUSG00000052488	ProperStrand	43	chr9	120038505	120038661	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	10	-inf
mmu-miR-6238	2	19	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr13	49779747	49779803	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-4.3142
chr19	5274912	5274928	protein_coding	Sf3b2	exon	ENSMUSG00000024853	ProperStrand	102	chr18	75161533	75161576	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-6.1531
chr7	115539544	115539562	protein_coding	Olfr495	exon	ENSMUSG00000062147	ProperStrand	1	chr18	35714187	35714277	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-inf
chr4	44051847	44053137	protein_coding	Gne	exon	ENSMUSG00000028479	ProperStrand	8	chr17	24665440	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-9.0150
chr8	109654406	109654496	LTR	MTC	MaLR	chr8MTC109654236	NonProperStrand	1	chr8	109654689	109654779	SINE	ID_B1	B4	chr8ID_B1109654627	ProperStrand	1	1	-inf
chr1	4887122	4887191	protein_coding	Tcea1	utr3	ENSMUSG00000033813	ProperStrand	24	chr16	23111394	23111484	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.7195
chr11	98016292	98016316	protein_coding	Med1	utr3	ENSMUSG00000018160	ProperStrand	23	chr11	77996557	77996616	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	3	-17.7333
chr6	128380608	128380666	protein_coding	Fkbp4	utr3	ENSMUSG00000030357	ProperStrand	114	chr19	8963070	8963160	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.2878
chrX	71025614	71025940	protein_coding	Idh3g	exon	ENSMUSG00000002010	ProperStrand	10	chr7	137955511	137955531	protein_coding	Fgfr2	intron	ENSMUSG00000030849	ProperStrand	100	2	-inf
chr9	58488499	58488591	protein_coding	Nptn	exon	ENSMUSG00000032336	ProperStrand	25	chr16	23111451	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.6475
chr11	87794892	87794959	protein_coding	Dynll2	utr3	ENSMUSG00000020483	ProperStrand	22	chr15	79913294	79913331	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-5.5214
chr3	153574588	153574654	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	chr15	98356818	98356912	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	3	-10.1262
chr13	14285725	14285825	protein_coding	Arid4b	utr3	ENSMUSG00000039219	ProperStrand	28	chr7	103971744	103971771	protein_coding	Odz4	intron	ENSMUSG00000048078	ProperStrand	93	1	-13.9761
chr1	30881108	30881162	protein_coding	Phf3	exon	ENSMUSG00000048874	ProperStrand	102	chr4	116862547	116862637	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	1	-7.7829
chr17	68296348	68296424	protein_coding	Arhgap28	intron	ENSMUSG00000024043	ProperStrand	13	chr17	39985438	39985538	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-9.0150
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr8	86457461	86457531	protein_coding	Lphn1	exon	ENSMUSG00000013033	ProperStrand	221	1	-2.5521
chr3	85942713	85942750	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	chr2	26494708	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-1.1127
chr11	100581379	100581396	protein_coding	Rab5c	utr5	ENSMUSG00000019173	ProperStrand	76	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.8527
chr1	53817852	53817879	protein_coding	Stk17b	exon	ENSMUSG00000026094	ProperStrand	6	chr14	52695354	52697089	protein_coding	Hnrnpc	exon	ENSMUSG00000060373	ProperStrand	75	1	-17.5189
chr9	40612398	40612416	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr2	109516160	109516176	protein_coding	Bdnf	utr5	ENSMUSG00000048482	NonProperStrand	47	1	-8.6286
chr1	155287314	155287355	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	chr17	35299522	35299642	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	7	-10.2957
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr11	48614370	48614427	snoRNA	ENSMUSG00000064500_SNORD95	.	ENSMUSG00000064500	ProperStrand	100	1	-6.9578
chr2	119484027	119484048	protein_coding	Ndufaf1	exon	ENSMUSG00000027305	ProperStrand	1	chr7	38354919	38354935	protein_coding	Zfp536	exon	ENSMUSG00000043456	NonProperStrand	236	1	-inf
chr19	10577468	10577557	protein_coding	Sdhaf2	utr3	ENSMUSG00000024668	ProperStrand	2	chr10	23505149	23505218	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-8.0476
chr9	20943903	20943927	protein_coding	Cdc37	utr3	ENSMUSG00000019471	ProperStrand	97	chr4	131865859	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.0821
chr6	30401908	30402010	protein_coding	Klhdc10	utr3	ENSMUSG00000029775	ProperStrand	14	chr5	130300516	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-5.2410
chr2	32819336	32819371	protein_coding	Rpl12	exon	ENSMUSG00000038900	NonProperStrand	1	chr16	23111443	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	NonProperStrand	38	1	-inf
chr15	58884095	58884113	protein_coding	Mtss1	intron	ENSMUSG00000022353	NonProperStrand	51	chr11	113762909	113762926	protein_coding	Sdk2	intron	ENSMUSG00000041592	NonProperStrand	98	1	-12.6559
chrX	34667269	34667285	protein_coding	Nkap	exon	ENSMUSG00000016409	NonProperStrand	133	chr7	117189864	117189909	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-4.6605
chr12	112335550	112335567	protein_coding	Rcor1	intron	ENSMUSG00000037896	NonProperStrand	5	chr14	31827517	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-12.0933
chr3	104607137	104607189	protein_coding	Mov10	exon	ENSMUSG00000002227	ProperStrand	96	chr5	136611800	136611816	protein_coding	Lrwd1	exon	ENSMUSG00000029703	NonProperStrand	51	1	-12.6977
chr13	56353200	56353217	protein_coding	Neurog1	exon	ENSMUSG00000048904	NonProperStrand	3	chr8	46038118	46038193	protein_coding	Fat1	exon	ENSMUSG00000070047	ProperStrand	306	1	-16.4025
chr19	10696824	10702069	protein_coding	Ddb1	utr3	ENSMUSG00000024740	ProperStrand	304	chr16	23110470	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-1.4537
chr16	91270626	91270642	protein_coding	Olig1	exon	ENSMUSG00000046160	NonProperStrand	32	chr10	60692417	60692433	protein_coding	Adamts14	exon	ENSMUSG00000059901	NonProperStrand	127	1	-13.0794
chr11	101371298	101371405	protein_coding	Brca1	exon	ENSMUSG00000017146	ProperStrand	51	chr4	108010795	108010839	protein_coding	2010305A19Rik	exon	ENSMUSG00000048351	ProperStrand	8	1	-17.7327
chr15	96839141	96839352	protein_coding	Slc38a4	exon	ENSMUSG00000022464	ProperStrand	139	chr19	8799849	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-3.3650
chr15	84101747	84103941	protein_coding	Parvb	exon	ENSMUSG00000022438	ProperStrand	127	chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	1	-11.0608
chr14	15569966	15570722	protein_coding	Slc4a7	utr5	ENSMUSG00000021733	ProperStrand	24	chr11	97642952	97643005	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.1417
chr19	5948432	5948487	protein_coding	Pola2	exon	ENSMUSG00000024833	ProperStrand	29	chr11	77995203	77995231	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	4	-inf
chr12	112779245	112779284	protein_coding	Eif5	intron	ENSMUSG00000021282	ProperStrand	125	chr18	75161108	75161173	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	1	-7.5562
chr5	34234244	34234262	protein_coding	Whsc1	utr5	ENSMUSG00000057406	ProperStrand	409	chr4	56910496	56910618	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	2	-4.4155
chr7	120019728	120019745	protein_coding	Tead1	exon	ENSMUSG00000055320	NonProperStrand	41	chr2	166890502	166890556	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-8.3200
chr8	3568023	3568039	protein_coding	C330021F23Rik	utr5	ENSMUSG00000065952	NonProperStrand	85	chr19	8798740	8798775	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-4.1365
chr4	54961232	54961294	protein_coding	Zfp462	intron	ENSMUSG00000060206	ProperStrand	37	chr8	129468844	129468874	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	2	-8.7921
chr12	80177510	80177528	protein_coding	Plekhh1	exon	ENSMUSG00000060716	ProperStrand	24	chr4	116826699	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-8.6204
chr19	23332023	23332040	protein_coding	Smc5	exon	ENSMUSG00000024943	ProperStrand	146	chr11	69483223	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.0961
chr5	77388411	77388471	protein_coding	Paics	exon	ENSMUSG00000029247	ProperStrand	78	chr18	35716812	35716832	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.7505
chr4	126780701	126780780	protein_coding	Zmym6	exon	ENSMUSG00000042408	ProperStrand	10	chr1	55146003	55147580	protein_coding	Hspe1	exon	ENSMUSG00000073676	ProperStrand	31	4	-18.9284
chr8	74446729	74446745	protein_coding	Zfp617	intron	ENSMUSG00000066880	NonProperStrand	208	chr9	15118322	15118358	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-1.3975
chr6	28838535	28838560	protein_coding	Snd1	utr3	ENSMUSG00000001424	ProperStrand	210	chr5	147394860	147394876	protein_coding	Gpr12	exon	ENSMUSG00000041468	NonProperStrand	20	1	-13.0301
chr17	24665418	24665498	protein_coding	Rab26	intron	ENSMUSG00000079657	ProperStrand	11	chr5	130300446	130300536	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	NonProperStrand	11	1	-19.3304
chr1	75499663	75499679	protein_coding	Obsl1	exon	ENSMUSG00000026211	NonProperStrand	192	chr7	13516172	13516188	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	1	-6.3560
chr2	34629776	34629796	protein_coding	Hspa5	exon	ENSMUSG00000026864	ProperStrand	181	chr2	103588240	103588355	protein_coding	Nat10	exon	ENSMUSG00000027185	NonProperStrand	64	1	-10.9684
chr8	81585151	81594277	protein_coding	Zfp827	exon	ENSMUSG00000071064	ProperStrand	78	chr4	131908235	131908318	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.0614
chr9	71945928	71945945	protein_coding	Tcf12	intron	ENSMUSG00000032228	ProperStrand	26	chr9	120038001	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	2	-10.3180
chr1	192883077	192883157	protein_coding-noncoding	Tatdn3	utr3	ENSMUSG00000026632	NonProperStrand	1	chr1	192883236	192883326	protein_coding	Tatdn3	intron	ENSMUSG00000026632	NonProperStrand	1	1	-inf
chr15	90722056	90722078	LINE	Lx9	L1	chr15Lx990722029	NonProperStrand	1	chr2	90235285	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	1	-inf
chr11	97032919	97032967	protein_coding	Kpnb1	exon	ENSMUSG00000001440	ProperStrand	197	chr5	130295419	130295509	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-3.0188
chr19	12841559	12841612	protein_coding	Zfp91	utr3	ENSMUSG00000024695	ProperStrand	16	chr7	116663749	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.9773
chr12	112779228	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	chr4	86232356	86232456	snoRNA	ENSMUSG00000088958_Scarna8	.	ENSMUSG00000088958	ProperStrand	366	1	-1.5914
chr4	137297997	137298078	protein_coding	Alpl	utr3	ENSMUSG00000028766	ProperStrand	80	chr4	53873594	53873646	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	1	-8.4689
chr7	141399351	141399367	protein_coding	Adam12	intron	ENSMUSG00000054555	NonProperStrand	49	chr17	35089181	35089232	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-5.8825
chr4	118804745	118804777	protein_coding	Slc2a1	exon	ENSMUSG00000028645	ProperStrand	361	chr4	106472505	106472522	protein_coding	Acot11	intron	ENSMUSG00000034853	ProperStrand	61	1	-9.6850
chr4	132052987	132053381	protein_coding	Sesn2	exon	ENSMUSG00000028893	ProperStrand	75	chr5	130300493	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.1352
chr12	10506526	10506542	LTR	RLTR10-int	ERVK	chr12RLTR10-int10506233	NonProperStrand	13	chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	1	-11.8283
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr2	130101246	130101310	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	2	-2.2501
chr3	46250662	46250678	protein_coding	Pabpc4l	exon	ENSMUSG00000090919	ProperStrand	137	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-5.5758
chr8	13416896	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr12	112779177	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	9	-4.4067
chr9	120868917	120868980	protein_coding	Ctnnb1	utr3	ENSMUSG00000006932	ProperStrand	214	chr8	73419657	73419674	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-3.4490
chr16	22820657	22820674	protein_coding	Tbccd1	intron	ENSMUSG00000004462	ProperStrand	3	chr3	123210853	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-8.0648
chr7	51747516	51747616	protein_coding	2310044H10Rik	exon	ENSMUSG00000008140	ProperStrand	14	chr9	63868722	63868738	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	1	-11.5447
chr14	70821446	70822463	protein_coding	Piwil2	exon	ENSMUSG00000033644	ProperStrand	36	chr11	69483175	69483265	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.3562
chr12	98729093	98729183	LINE	Lx7	L1	chr12Lx798728454	NonProperStrand	1	chr12	98728887	98728977	LINE	Lx7	L1	chr12Lx798728454	ProperStrand	1	1	-inf
chr8	75191618	75191634	protein_coding	Nwd1	exon	ENSMUSG00000048148	ProperStrand	46	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.7662
chr15	7143671	7143733	protein_coding	Lifr	utr3	ENSMUSG00000054263	ProperStrand	64	chr15	79913288	79913320	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-3.4733
chr1	193175231	193175311	SINE	B2_Mm1a	B2	chr1B2_Mm1a193175175	NonProperStrand	1	chr11	36915879	36915969	protein_coding	Odz2	intron	ENSMUSG00000049336	ProperStrand	106	1	-inf
chr2	180891456	180891473	protein_coding	Eef1a2	utr5	ENSMUSG00000016349	NonProperStrand	7	chr4	155070184	155070243	protein_coding	B930041F14Rik	utr3	ENSMUSG00000074738	ProperStrand	3	1	-inf
chr1	72386050	72386118	protein_coding	Xrcc5	intron	ENSMUSG00000026187	ProperStrand	12	chr18	35716835	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-12.4231
chr14	70718621	70718656	protein_coding	Slc39a14	exon	ENSMUSG00000022094	ProperStrand	17	chr12	88778632	88778722	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-9.0370
chr1	75140023	75140041	protein_coding	Fam134a	exon	ENSMUSG00000049339	NonProperStrand	5	chr16	23110872	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr7	151765212	151765228	antisense	Gm10574	.	ENSMUSG00000073778	ProperStrand	357	chr19	8800406	8800478	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-0.7562
chr6	100183163	100236506	protein_coding	Rybp	exon	ENSMUSG00000072872	ProperStrand	51	chr18	35716707	35716763	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-6.4987
chr4	43505820	43505910	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr1	173433178	173433254	protein_coding	B930036N10Rik	utr3	ENSMUSG00000091993	ProperStrand	150	1	-1.5534
chr2	158185530	158185655	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr7	118219574	118219652	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	8	-2.0370
chr4	147832741	147832831	protein_coding	Mtor	exon	ENSMUSG00000028991	ProperStrand	65	chr11	69483200	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.3145
chr4	43505789	43505869	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr11	116465775	116466319	protein_coding	Rhbdf2	exon	ENSMUSG00000020806	ProperStrand	20	1	-5.1523
chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	chr10	107848959	107849031	protein_coding	Pawr	intron	ENSMUSG00000035873	ProperStrand	39	1	-10.9430
chr9	62699186	62699286	protein_coding	Cln6	utr3	ENSMUSG00000032245	ProperStrand	34	chr11	69481413	69481459	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-4.2592
chr14	51861227	51861243	SINE	B1F2	Alu	chr14B1F251861164	NonProperStrand	1	chr15	88564062	88564153	protein_coding	Brd1	intron	ENSMUSG00000022387	ProperStrand	70	1	-inf
chr17	3177981	3178026	protein_coding	Scaf8	intron	ENSMUSG00000046201	ProperStrand	126	chr11	77995189	77995220	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	2	-7.8373
chr10	45097382	45097472	protein_coding	Lin28b	utr3	ENSMUSG00000063804	ProperStrand	26	chrX	34622939	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-7.8951
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr5	108336365	108336495	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-2.2404
chr7	25704754	25706948	protein_coding	Arhgef1	exon	ENSMUSG00000040940	ProperStrand	13	chr8	73419657	73419712	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	5	-inf
chr1	68879190	68879213	protein_coding	Erbb4	intron	ENSMUSG00000062209	ProperStrand	8	chr19	8799828	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	2	-14.4922
chr11	53340594	53340620	protein_coding	Sept8	intron	ENSMUSG00000018398	ProperStrand	10	chr9	15118310	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	5	-inf
chr12	17285404	17285665	protein_coding	Pdia6	exon	ENSMUSG00000020571	ProperStrand	114	chr11	97641485	97641575	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	1	-6.5819
chr2	166159723	166159742	LTR	MLT1A0	MaLR	chr2MLT1A0166159707	NonProperStrand	1	chr16	23111416	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-inf
chr11	102294590	102294607	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr5	14252800	14252816	protein_coding	Sema3e	utr3	ENSMUSG00000063531	ProperStrand	125	1	-7.4289
chr7	148653276	148653294	lincRNA	Gm10575	exon	ENSMUSG00000073787	ProperStrand	25	chr15	79908959	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-7.2107
chr13	113471408	113471437	protein_coding	Slc38a9	intron	ENSMUSG00000047789	ProperStrand	2	chr2	30177803	30178090	protein_coding	Nup188	exon	ENSMUSG00000052533	ProperStrand	96	1	-21.5979
chr2	75503484	75503584	protein_coding	Hnrnpa3	utr3	ENSMUSG00000059005	ProperStrand	289	chr1	39605591	39605624	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-4.2788
chr11	97694885	97694960	protein_coding	Lasp1	exon	ENSMUSG00000038366	ProperStrand	65	chr3	123210854	123210896	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.9374
chr9	70324375	70324391	protein_coding	Rnf111	exon	ENSMUSG00000032217	NonProperStrand	13	chr11	97643038	97643091	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-5.3468
chr7	36217581	36217626	protein_coding	Ccdc123	exon	ENSMUSG00000023072	ProperStrand	7	chr10	23505152	23505209	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-5.0629
chr13	49218439	49218455	protein_coding	Wnk2	intron	ENSMUSG00000037989	NonProperStrand	67	chr19	8799597	8799644	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-6.5480
chr14	47808947	47808963	protein_coding	Gch1	utr5	ENSMUSG00000037580	NonProperStrand	31	chr3	68889087	68889145	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-4.4957
chr2	90235303	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	14397578	14397594	protein_coding	Amotl1	exon	ENSMUSG00000013076	ProperStrand	72	1	-4.1164
chr14	51427286	51427316	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr7	150717335	150717425	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	4	-2.9622
chr9	15130711	15130801	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	chr12	41750741	41750758	protein_coding	Immp2l	intron	ENSMUSG00000056899	ProperStrand	21	1	-11.3387
chr2	89368462	89368480	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	chr4	131908688	131908799	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	14	-9.2011
chr17	20302101	20302181	LINE	L1_Mur2	L1	chr17L1_Mur220301821	NonProperStrand	1	chr17	20302354	20302444	LINE	Lx4A	L1	chr17Lx4A20302174	ProperStrand	1	1	-inf
chr7	120048016	120048088	protein_coding	Tead1	utr3	ENSMUSG00000055593	ProperStrand	15	chr10	23505190	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.5481
chr13	56216755	56216771	protein_coding	H2afy	intron	ENSMUSG00000015937	NonProperStrand	9	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-12.4764
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	6	-6.9491
chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	chr4	122970403	122970484	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-2.8247
chr16	87594620	87594639	protein_coding	ORF63	exon	ENSMUSG00000025610	NonProperStrand	23	chr2	158182180	158182292	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-6.8982
chr12	17552979	17553069	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	NonProperStrand	16	chr18	35102297	35102331	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	NonProperStrand	4	3	-inf
chr8	3568022	3568039	protein_coding	C330021F23Rik	utr5	ENSMUSG00000065952	NonProperStrand	85	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.2579
chr8	47617228	47618752	protein_coding	Acsl1	exon	ENSMUSG00000018796	ProperStrand	23	chr9	72579184	72580419	protein_coding	Nedd4	exon	ENSMUSG00000032216	ProperStrand	308	1	-11.9765
chr15	84770522	84770622	protein_coding	Nup50	utr3	ENSMUSG00000016619	ProperStrand	39	chr2	130103432	130103502	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-8.9281
chr6	128195688	128195798	protein_coding	Tead4	intron	ENSMUSG00000030353	ProperStrand	14	chr16	23111707	23111754	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.5328
chr4	75094306	75094322	LINE	Lx9	L1	chr4Lx975094037	ProperStrand	41	chr11	6428123	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.8955
chr4	115795783	115795849	protein_coding	Rad54l	utr5	ENSMUSG00000028702	ProperStrand	19	chr4	122968584	122968674	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	5	-inf
chr15	101828432	101828473	protein_coding	Krt8	exon	ENSMUSG00000049382	ProperStrand	12	chr3	78898773	78898793	protein_coding	Rapgef2	exon	ENSMUSG00000062232	ProperStrand	14	1	-inf
chr13	45651495	45651524	protein_coding	Atxn1	utr3	ENSMUSG00000046876	ProperStrand	28	chr7	116663634	116663724	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-9.6073
chr16	38046198	38046288	LTR	RLTR20B3	ERVK	chr16RLTR20B338046087	ProperStrand	1	chr16	59685831	59685921	protein_coding	Epha6	intron	ENSMUSG00000055540	ProperStrand	9	1	-inf
chr14	122857340	122857440	protein_coding	Zic5	utr3	ENSMUSG00000041703	ProperStrand	7	chr2	63936037	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-12.2786
chr11	50108505	50108523	protein_coding	Canx	utr3	ENSMUSG00000020368	ProperStrand	296	chr7	88488682	88489247	protein_coding	Rps17	exon	ENSMUSG00000061787	ProperStrand	105	2	-14.2564
chr12	44844120	44844156	snoRNA	ENSMUSG00000065004_SNORA33	.	ENSMUSG00000065004	ProperStrand	111	chr1	89673731	89673773	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-2.1935
chr9	57385425	57385441	protein_coding	2310046O06Rik	utr5	ENSMUSG00000032305	ProperStrand	135	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.8893
chr2	31826628	31826718	protein_coding	Aif1l	utr3	ENSMUSG00000001864	ProperStrand	4	chr7	116664812	116664892	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-7.9535
chr14	56220207	56220223	protein_coding	Rnf31	exon	ENSMUSG00000047098	NonProperStrand	5	chr5	121655016	121655096	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-8.7807
chr11	48616968	48617366	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	chr1	145626062	145626152	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-5.3600
chr14	40289329	40289346	LTR	MTEa	MaLR	chr14MTEa40289022	ProperStrand	21	chr11	83107805	83107895	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	3	-inf
chr5	31093938	31093956	protein_coding	Dpysl5	exon	ENSMUSG00000029168	NonProperStrand	38	chr8	122034372	122034408	protein_coding	Mbtps1	intron	ENSMUSG00000031835	ProperStrand	81	1	-13.6356
chr1	196786599	196786615	lincRNA	Gm16897	intron	ENSMUSG00000086469	ProperStrand	12	chr3	94167315	94167331	protein_coding	C2cd4d	utr5	ENSMUSG00000091648	ProperStrand	30	1	-18.1170
chr17	35299548	35299641	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	chr2	158182156	158182271	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	19	-6.8849
chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	chr1	88252838	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-2.5586
chr18	10354222	10354238	protein_coding	Greb1l	intron	ENSMUSG00000042942	ProperStrand	23	chr2	91436228	91436281	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-9.4287
chr8	24352447	24367494	protein_coding	Golga7	utr3	ENSMUSG00000015341	ProperStrand	36	chr16	23110852	23111002	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	9	-13.5562
chr2	121282863	121282879	protein_coding	2310003F16Rik	exon	ENSMUSG00000027245	ProperStrand	40	chr1	88252848	88252902	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-7.4480
chr5	100855902	100855937	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr2	125073530	125073625	protein_coding	Dut	exon	ENSMUSG00000027203	ProperStrand	18	1	-9.0617
chr3	101390107	101408376	protein_coding	Atp1a1	exon	ENSMUSG00000033161	ProperStrand	316	chr10	23505150	23505284	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	6	-1.0864
chr2	26494741	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	chr7	88674829	88674867	snoRNA	ENSMUSG00000093107_AC167122.1	.	ENSMUSG00000093107	ProperStrand	110	1	-2.0664
chr17	27649644	27649660	protein_coding	Grm4	intron	ENSMUSG00000063239	ProperStrand	147	chr9	15118321	15118343	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-1.9201
chr6	133640083	133640101	LTR	MYSERV6-int	ERVK	chr6MYSERV6-int133640065	ProperStrand	1	chr2	26493387	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	1	-inf
chr12	3968611	3968627	protein_coding	Efr3b	exon	ENSMUSG00000020658	ProperStrand	142	chr17	56760280	56760304	protein_coding	Lonp1	intron	ENSMUSG00000041168	ProperStrand	83	1	-10.9318
chr5	119192283	119192363	protein_coding	Med13l	exon	ENSMUSG00000018076	ProperStrand	226	chr6	125136463	125136553	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	1	-3.8826
chr19	5272873	5272890	protein_coding	Pacs1	utr5	ENSMUSG00000024855	ProperStrand	24	chr13	98021450	98021499	protein_coding	Enc1	utr3	ENSMUSG00000041773	ProperStrand	24	1	-17.0397
chr11	120460562	120460662	protein_coding	Anapc11	utr5	ENSMUSG00000025135	ProperStrand	6	chr16	23111448	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-5.4240
chr11	40515327	40536966	protein_coding	Hmmr	exon	ENSMUSG00000020330	ProperStrand	61	chr4	131908809	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-2.3264
chr12	114290175	114290191	protein_coding	Pacs2	intron	ENSMUSG00000021143	NonProperStrand	302	chr9	41808386	41808428	protein_coding	Sorl1	exon	ENSMUSG00000049313	ProperStrand	112	1	-8.8238
chr14	55087991	55088152	protein_coding	Lrp10	exon	ENSMUSG00000022175	ProperStrand	19	chr6	124791245	124791261	protein_coding	Leprel2	utr3	ENSMUSG00000023191	ProperStrand	44	1	-16.2811
chr8	98270014	98270088	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	chr10	39978370	39978470	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	8	-2.9144
chr2	25563070	25563086	antisense	A230005M16Rik	.	ENSMUSG00000087612	ProperStrand	103	chr7	52650089	52650138	protein_coding	Snrnp70	exon	ENSMUSG00000063511	ProperStrand	61	1	-12.1944
chr9	44688281	44688298	protein_coding	Mll1	intron	ENSMUSG00000002028	NonProperStrand	26	chr4	21606097	21606114	protein_coding	Prdm13	exon	ENSMUSG00000040478	ProperStrand	51	1	-15.3449
chr5	100855906	100855974	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr18	12172461	12172477	protein_coding	6030446N20Rik	intron	ENSMUSG00000049411	ProperStrand	235	1	-3.9958
chr7	152048786	152048886	protein_coding	Fgf4	utr3	ENSMUSG00000050917	ProperStrand	66	chrX	34622906	34622953	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-3.0000
chr7	86050776	86050825	protein_coding	Aen	exon	ENSMUSG00000030609	ProperStrand	17	chr16	23110530	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	4	-15.4309
chr15	98350184	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	chr14	63287577	63287612	snoRNA	ENSMUSG00000089531_SNORA73	.	ENSMUSG00000089531	ProperStrand	123	1	-3.4111
chr13	21845477	21845567	protein_coding	Hist1h2ak	exon	ENSMUSG00000063021	ProperStrand	30	chr3	123210899	123210979	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.2714
chr5	151344592	151344641	protein_coding	Brca2	exon	ENSMUSG00000041147	ProperStrand	75	chr4	116827132	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-6.5977
chr9	30978158	30979548	protein_coding	Aplp2	exon	ENSMUSG00000031996	ProperStrand	172	chr11	97642967	97643047	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-0.9081
chr7	148047101	148047202	protein_coding	Ric8	exon	ENSMUSG00000025485	ProperStrand	5	chr11	68886949	68887033	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-9.2042
chr1	55138623	55138960	protein_coding	Hspd1	exon	ENSMUSG00000025980	ProperStrand	140	chr18	73693166	73693188	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-3.9013
chr17	35275562	35275594	protein_coding	Bag6	exon	ENSMUSG00000024392	ProperStrand	181	chr19	8800379	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-1.6519
chr1	59235967	59235983	protein_coding	Als2	exon	ENSMUSG00000026024	ProperStrand	32	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.9664
chr9	120864729	120864780	protein_coding	Ctnnb1	exon	ENSMUSG00000006932	ProperStrand	214	chr1	88247769	88247871	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	8	-23.1605
chr2	90857420	90857496	protein_coding	Celf1	utr3	ENSMUSG00000005506	ProperStrand	61	chr16	23111777	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-7.3128
chr5	76659330	76659347	protein_coding	Clock	exon	ENSMUSG00000029238	NonProperStrand	64	chr3	68889026	68889132	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-3.1401
chr5	148113281	148113297	protein_coding	Cdx2	utr3	ENSMUSG00000029646	ProperStrand	276	chr9	15119967	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-4.2791
chr19	8946722	8948007	protein_coding	Ubxn1	exon	ENSMUSG00000071655	ProperStrand	68	chr4	116828379	116828453	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-8.1319
chr4	129392378	129392437	protein_coding	Khdrbs1	utr3	ENSMUSG00000028790	ProperStrand	22	chr16	87419192	87419216	snoRNA	ENSMUSG00000065647_SNORA2	.	ENSMUSG00000065647	ProperStrand	123	3	-inf
chr17	75790277	75790293	protein_coding	Ltbp1	utr3	ENSMUSG00000001870	NonProperStrand	66	chr4	149619396	149620679	protein_coding	Eno1	exon	ENSMUSG00000063524	ProperStrand	432	1	-9.1688
chr17	34072694	34072728	protein_coding	Rgl2	exon	ENSMUSG00000041354	ProperStrand	2	chr11	69483197	69483268	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-inf
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr4	128386873	128386890	protein_coding	Phc2	exon	ENSMUSG00000028796	NonProperStrand	10	1	-14.0728
chr9	21392342	21392522	protein_coding	Carm1	exon	ENSMUSG00000032185	ProperStrand	82	chr6	52165758	52165774	protein_coding	Hoxa7	exon	ENSMUSG00000038236	ProperStrand	28	1	-14.2218
chr5	136218243	136218259	protein_coding	Tmem120a	exon	ENSMUSG00000039886	NonProperStrand	2	chr4	131865855	131865925	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-8.7800
chr11	57872446	57872488	protein_coding	Larp1	utr3	ENSMUSG00000037331	ProperStrand	201	chr15	82725598	82725635	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	2	-9.9310
chr9	64024781	64026210	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	chr8	73419655	73419728	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	4	-1.3959
chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	chr4	140625714	140625739	protein_coding	Necap2	intron	ENSMUSG00000028923	ProperStrand	4	1	-15.5445
chr2	90857699	90857770	protein_coding	Celf1	utr3	ENSMUSG00000005506	ProperStrand	61	chr1	39605591	39605657	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-7.3109
chr8	119413691	119413758	protein_coding	2310061C15Rik	exon	ENSMUSG00000014633	ProperStrand	6	chr9	15119697	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	4	-19.1682
chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	chr5	151755615	151755632	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-3.8197
chr7	112629988	112630005	protein_coding	Prkcdbp	intron	ENSMUSG00000037060	NonProperStrand	43	chr5	130300418	130300484	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.0960
chr4	62046669	62047130	protein_coding	Slc31a1	exon	ENSMUSG00000066150	ProperStrand	45	chr15	82980090	82980190	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-7.7136
chr3	33041922	33041939	protein_coding	Pex5l	utr5	ENSMUSG00000027674	ProperStrand	52	chr7	117189923	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	5	-15.2285
chr5	23007811	23007845	protein_coding	Mll5	exon	ENSMUSG00000029004	ProperStrand	21	chr18	35716812	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-13.4149
chr7	24713726	24713742	protein_coding	Vmn1r179	exon	ENSMUSG00000046924	NonProperStrand	69	chr2	34989535	34989563	protein_coding	Cep110	utr5	ENSMUSG00000057110	ProperStrand	20	1	-15.2467
chr10	90579662	90579692	protein_coding	Slc25a3	utr3	ENSMUSG00000061904	ProperStrand	74	chr2	130101985	130102085	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-4.9495
chr5	131455385	131455404	protein_coding	Wbscr17	intron	ENSMUSG00000034040	NonProperStrand	11	chr19	8799018	8799083	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-9.2610
chr11	82596925	82596947	protein_coding	Lig3	exon	ENSMUSG00000020697	ProperStrand	34	chr1	89681174	89681264	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	4	-20.5440
chr2	105238284	105238343	protein_coding	Rcn1	intron	ENSMUSG00000005973	ProperStrand	24	chr12	71146391	71146407	protein_coding	Nin	exon	ENSMUSG00000021068	ProperStrand	95	1	-14.2461
chr16	38231690	38231770	protein_coding	Gsk3b	intron	ENSMUSG00000022812	ProperStrand	80	chr16	93859964	93860056	protein_coding	Morc3	intron	ENSMUSG00000039456	NonProperStrand	33	1	-13.9372
chr9	44551893	44551967	protein_coding	Arcn1	utr3	ENSMUSG00000032096	ProperStrand	35	chr6	4940091	4940107	protein_coding	Ppp1r9a	intron	ENSMUSG00000032827	ProperStrand	50	1	-14.7721
chr3	116335340	116365435	protein_coding	Hiat1	utr5	ENSMUSG00000089911	ProperStrand	20	chr10	23505152	23505253	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-5.2605
chr3	108228259	108228275	protein_coding	Sars	utr3	ENSMUSG00000068739	NonProperStrand	200	chr1	162967734	162967806	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	1	-7.8406
chr7	13510943	13511113	protein_coding	Rps5	exon	ENSMUSG00000012848	ProperStrand	108	chr7	116663692	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-2.9182
chr2	90235294	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr3	95980311	95980410	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	4	-0.9401
chr15	82980089	82980225	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr5	130300428	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	19	-5.2814
chr8	13416897	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr3	40755217	40755233	protein_coding	Larp1b	intron	ENSMUSG00000037814	ProperStrand	29	1	-7.9068
chr11	69036908	69037067	protein_coding	Gucy2e	exon	ENSMUSG00000020890	ProperStrand	1	chr16	23111373	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-inf
chr2	34582752	34583863	protein_coding	Gapvd1	exon	ENSMUSG00000026867	ProperStrand	31	chr4	131908755	131908797	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.2342
chr11	101466284	101466350	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	chr1	59749360	59749432	snoRNA	ENSMUSG00000077358_SNORD70	.	ENSMUSG00000077358	ProperStrand	63	1	-8.7740
chr2	122266069	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr17	35299506	35299642	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	6	-8.1359
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	NonProperStrand	14	chr10	110918633	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	NonProperStrand	10	1	-20.4644
chr17	30916109	30916722	protein_coding	Dnahc8	exon	ENSMUSG00000033826	ProperStrand	246	chr8	32260335	32260357	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-2.0909
chr9	78023109	78023150	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr7	13610141	13610187	protein_coding	Trim28	exon	ENSMUSG00000005566	ProperStrand	296	2	-4.9722
chr6	70098720	70098737	LTR	MTEa	MaLR	chr6MTEa70098663	ProperStrand	30	chr11	106362638	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-8.7960
chr17	13209337	13209401	protein_coding	Sod2	utr3	ENSMUSG00000006818	ProperStrand	17	chr17	13112534	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	4	-19.9040
chr18	35743391	35743457	protein_coding	Matr3	intron	ENSMUSG00000037236	ProperStrand	90	chr4	131908351	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.8848
chr19	10685203	10685249	protein_coding	Ddb1	exon	ENSMUSG00000024740	ProperStrand	304	chr10	110918554	110918589	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-1.7836
chr3	38785544	38785561	lincRNA	C230034O21Rik	exon	ENSMUSG00000086181	ProperStrand	5	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-14.0925
chr18	35742487	35742504	protein_coding	Matr3	exon	ENSMUSG00000037236	ProperStrand	90	chr18	35714193	35714291	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-2.7167
chr9	40611945	40611965	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr11	106362640	106362692	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-2.4986
chr2	179920375	179920400	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr17	13115715	13115786	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	3	-9.7398
chr5	99007642	99007659	protein_coding	1700007G11Rik	intron	ENSMUSG00000057816	ProperStrand	10	chr4	131908383	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.5892
chr7	88186459	88186475	protein_coding	Zfp592	exon	ENSMUSG00000005621	NonProperStrand	32	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-11.6979
chr16	20686027	20686322	protein_coding	Eif4g1	exon	ENSMUSG00000045983	ProperStrand	199	chr11	101304896	101304954	protein_coding	Rpl27	exon	ENSMUSG00000063316	ProperStrand	96	1	-9.9645
chr12	17557425	17557486	protein_coding	Odc1	exon	ENSMUSG00000011179	ProperStrand	173	chr16	30514154	30514171	protein_coding	Tmem44	utr3	ENSMUSG00000022537	ProperStrand	217	1	-8.6147
chr4	140673114	140673153	protein_coding	D4Ertd22e	intron	ENSMUSG00000040842	ProperStrand	23	chr1	58228679	58228696	protein_coding	Aox3	exon	ENSMUSG00000064294	ProperStrand	39	1	-16.0529
chr9	56934567	56937224	protein_coding	Sin3a	exon	ENSMUSG00000042557	ProperStrand	108	chr4	131865860	131865950	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.9473
chr2	153143173	153143189	protein_coding	Kif3b	exon	ENSMUSG00000027475	NonProperStrand	24	chr2	26768368	26768425	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	2	-11.9454
chr13	30338191	30338207	protein_coding	Mboat1	utr3	ENSMUSG00000038732	NonProperStrand	148	chr4	56910496	56910548	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-4.3577
chrX	84483704	84483748	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr17	53863910	53863926	pseudogene	4932415M13Rik	.	ENSMUSG00000062036	ProperStrand	3	1	-14.6276
chr13	48918204	48918247	protein_coding	Phf2	intron	ENSMUSG00000038025	ProperStrand	5	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-12.8830
chr4	131908433	131908453	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr2	143773500	143773516	protein_coding	Rrbp1	utr3	ENSMUSG00000027422	NonProperStrand	20	5	-20.0066
chr10	75188097	75188331	protein_coding	Cabin1	exon	ENSMUSG00000020196	ProperStrand	62	chr18	33954817	33954897	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-3.4452
chr5	77342738	77342798	protein_coding	Ppat	utr3	ENSMUSG00000029246	ProperStrand	55	chr16	23110986	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-0.9304
chr19	6376971	6377048	protein_coding	Sf1	utr3	ENSMUSG00000024949	ProperStrand	251	chr19	44031111	44034550	protein_coding	Cpn1	exon	ENSMUSG00000025196	ProperStrand	11	1	-13.9061
chr12	32232317	32232333	protein_coding	Slc26a4	intron	ENSMUSG00000020651	ProperStrand	7	chr16	43886796	43886848	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	1	-12.4941
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr7	29073210	29073330	protein_coding	BC089491	exon	ENSMUSG00000046750	ProperStrand	62	1	-7.7297
chr14	76247108	76247154	protein_coding	Tpt1	exon	ENSMUSG00000060126	ProperStrand	236	chr5	74489642	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	4	-6.0204
chr4	116827345	116827649	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	chr11	97642952	97643092	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	4	-2.7771
chr1	130252093	130252163	protein_coding	Mcm6	exon	ENSMUSG00000026355	ProperStrand	69	chr9	15119297	15119397	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-4.8384
chr5	136707644	136707661	protein_coding	Sh2b2	exon	ENSMUSG00000005057	NonProperStrand	101	chr1	13146839	13146857	protein_coding	Ncoa2	intron	ENSMUSG00000005886	ProperStrand	26	1	-13.9584
chr19	41992744	41992795	protein_coding	Pgam1	utr3	ENSMUSG00000011752	ProperStrand	124	chr17	69737986	69738002	protein_coding	Zfp161	utr3	ENSMUSG00000049672	NonProperStrand	45	1	-12.4361
chr3	101394441	101394531	protein_coding	Atp1a1	exon	ENSMUSG00000033161	ProperStrand	316	chr17	24856619	24856699	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-3.2543
chr7	67123693	67123759	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	chr16	23109046	23109090	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-3.6376
chr11	85636315	85636345	protein_coding	Bcas3	intron	ENSMUSG00000059439	ProperStrand	20	chr8	129468745	129468835	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-6.5725
chr9	13631318	13631386	protein_coding	Cep57	utr5	ENSMUSG00000031922	NonProperStrand	1	chr18	33954813	33954913	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	NonProperStrand	24	1	-inf
chr8	13121717	13122847	protein_coding	Cul4a	exon	ENSMUSG00000031446	ProperStrand	36	chr4	131742187	131742231	protein_coding	Ythdf2	utr3	ENSMUSG00000040025	ProperStrand	15	2	-inf
chr7	91781245	91782463	protein_coding	Zfand6	exon	ENSMUSG00000030629	ProperStrand	11	chr7	134671393	134671473	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-11.3278
chr2	172834872	172834910	protein_coding	Rae1	exon	ENSMUSG00000027509	ProperStrand	38	chr18	35714145	35714235	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-7.1972
chr12	112907937	112908110	protein_coding	Ckb	exon	ENSMUSG00000001270	ProperStrand	28	chr1	71639775	71642291	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	1	-9.3668
chr6	29085431	29085448	protein_coding	Rbm28	exon	ENSMUSG00000029701	ProperStrand	24	chr11	69134417	69134866	protein_coding	Cntrob	exon	ENSMUSG00000032782	ProperStrand	19	1	-17.3644
chrX	76870071	76873218	protein_coding	Mageb16	utr5	ENSMUSG00000046942	ProperStrand	4	chr19	8799581	8799644	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-12.4240
chr2	90235315	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	55137776	55137798	LTR	IAPEy-int	ERVK	chr6IAPEy-int55137167	NonProperStrand	1	1	-inf
chr8	113447105	113447163	snoRNA	ENSMUSG00000065100_SNORA57	.	ENSMUSG00000065100	ProperStrand	81	chr19	8799844	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-4.3711
chr7	134671416	134671521	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	chr5	130295411	130295539	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	2	-1.4965
chr17	71148008	71148063	protein_coding	Dlgap1	intron	ENSMUSG00000003279	NonProperStrand	36	chr7	118219574	118219621	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-5.1539
chr14	124353869	124353886	protein_coding	Itgbl1	exon	ENSMUSG00000032925	ProperStrand	159	chr11	6519816	6519876	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-6.0127
chrX	84483699	84483720	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr7	152118581	152118597	protein_coding	Ccnd1	exon	ENSMUSG00000070348	ProperStrand	93	1	-7.3750
chr16	37384897	37384913	protein_coding	Stxbp5l	utr5	ENSMUSG00000022829	ProperStrand	332	chr1	162965980	162966035	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-0.8844
chr14	21541414	21541504	protein_coding	2310021P13Rik	exon	ENSMUSG00000021819	ProperStrand	11	chr3	123210907	123210987	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.2109
chr2	172908865	172908884	SINE	B4	B4	chr2B4172908799	NonProperStrand	1	chr1	162965531	162965588	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-inf
chr7	25674781	25674817	protein_coding	Rps19	utr3	ENSMUSG00000040952	ProperStrand	101	chr7	117190025	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	3	-6.4031
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr9	64024466	64024526	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	1	-3.7817
chr13	51779054	51779181	protein_coding	Secisbp2	utr3	ENSMUSG00000035139	ProperStrand	19	chr1	162965570	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.4761
chr12	117641454	117641471	LTR	RLTR6-int	ERV1	chr12RLTR6-int117641117	ProperStrand	19	chr9	15119358	15119425	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	2	-11.9180
chr18	38005056	38015529	protein_coding	Diap1	exon	ENSMUSG00000024456	ProperStrand	77	chr16	23111692	23111798	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-4.4454
chr8	123278924	123278941	protein_coding	Irf8	exon	ENSMUSG00000041515	NonProperStrand	7	chr7	117189863	117189992	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-7.5942
chr17	35384141	35384195	snoRNA	ENSMUSG00000065273_SNORD83	.	ENSMUSG00000065273	ProperStrand	244	chr2	158182156	158182256	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-2.4263
chr11	75309992	75310040	protein_coding	Prpf8	utr3	ENSMUSG00000020850	ProperStrand	255	chr11	69481326	69481433	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-0.9350
mmu-miR-6240	1	23	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr19	41970608	41970624	protein_coding	Rrp12	utr5	ENSMUSG00000035049	ProperStrand	106	1	-4.7968
chr10	119198457	119198474	protein_coding	Grip1	intron	ENSMUSG00000034813	ProperStrand	38	chr4	131865459	131865479	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-4.8759
chr19	25584301	25620334	protein_coding	Dmrt1	exon	ENSMUSG00000024837	ProperStrand	20	chr4	131865856	131865881	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.6810
chr4	58083061	58083077	protein_coding	Svep1	exon	ENSMUSG00000028369	ProperStrand	54	chr8	73419657	73419776	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.3213
chr7	133638873	133638933	protein_coding	Atxn2l	exon	ENSMUSG00000032637	ProperStrand	219	chr17	36000485	36000501	protein_coding	Nrm	exon	ENSMUSG00000059791	ProperStrand	253	1	-7.8403
chr19	43579408	43579425	protein_coding	Got1	intron	ENSMUSG00000025190	NonProperStrand	147	chr7	16524136	16524219	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	1	-7.9268
chr8	111316641	111316740	protein_coding	Zfhx3	exon	ENSMUSG00000038872	ProperStrand	65	chr14	76245212	76245230	protein_coding	Tpt1	utr5	ENSMUSG00000060126	ProperStrand	236	1	-10.4062
chr1	133423083	133423100	protein_coding	Srgap2	intron	ENSMUSG00000026425	NonProperStrand	17	chr16	75761550	75765200	protein_coding	Hspa13	exon	ENSMUSG00000032932	NonProperStrand	57	1	-15.9428
chrX	140786452	140787226	protein_coding-noncoding	Alg13	utr3	ENSMUSG00000041718	ProperStrand	87	chr7	19735238	19736636	protein_coding	Snrpd2	exon	ENSMUSG00000040824	ProperStrand	23	1	-14.4953
chr19	15993973	15995474	protein_coding	Psat1	exon	ENSMUSG00000024640	ProperStrand	33	chr5	74489595	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-4.9189
chr5	38067530	38067548	protein_coding	Stk32b	intron	ENSMUSG00000029123	NonProperStrand	8	chr2	70927899	70927916	protein_coding	Dcaf17	exon	ENSMUSG00000041966	NonProperStrand	89	1	-16.6254
chr17	46819980	46820006	protein_coding	Ppp2r5d	utr3	ENSMUSG00000059409	ProperStrand	97	chr1	162968479	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-5.1403
chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	chr14	31827518	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-2.1446
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr1	155287513	155287603	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	1	-1.9386
chr4	132394292	132394315	protein_coding	Ppp1r8	intron	ENSMUSG00000028882	ProperStrand	13	chr16	23110875	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.3283
chr17	35822057	35822257	protein_coding	Ddr1	exon	ENSMUSG00000003534	ProperStrand	129	chr1	84857349	84857367	protein_coding	Fbxo36	intron	ENSMUSG00000073633	NonProperStrand	1	1	-inf
chr15	82980103	82980225	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr6	125136372	125136550	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	4	-4.6144
chr16	31989194	31989224	protein_coding	Senp5	exon	ENSMUSG00000022772	ProperStrand	8	chr5	65210079	65210095	protein_coding	Klf3	intron	ENSMUSG00000029178	ProperStrand	56	1	-17.4726
chr6	70794803	70794819	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chr14	24251850	24251866	protein_coding	Kcnma1	intron	ENSMUSG00000063142	NonProperStrand	104	1	-10.3168
chr11	82718459	82718484	protein_coding	Nle1	exon	ENSMUSG00000020692	ProperStrand	13	chr15	34370545	34370664	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	6	-inf
chr3	129527942	129527976	protein_coding	Gar1	utr3	ENSMUSG00000028010	ProperStrand	10	chr12	112779182	112779254	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	3	-18.4226
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr4	56806991	56807082	protein_coding	Ikbkap	intron	ENSMUSG00000028431	ProperStrand	44	6	-inf
chr4	115484059	115484087	protein_coding	Atpaf1	utr3	ENSMUSG00000028710	ProperStrand	202	chr9	15119666	15119766	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	8	-10.7101
chr11	11867679	11870432	protein_coding	Grb10	exon	ENSMUSG00000020176	NonProperStrand	159	chr4	125816092	125816139	protein_coding	Stk40	exon	ENSMUSG00000042608	ProperStrand	32	1	-12.6284
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr14	124243064	124243084	protein_coding	Itgbl1	exon	ENSMUSG00000032925	ProperStrand	159	1	-2.6762
chr19	10702069	10702262	protein_coding	Ddb1	utr3	ENSMUSG00000024740	ProperStrand	304	chr7	117189863	117189943	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	3	-7.8833
chrX	84483731	84483757	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr13	46765144	46765160	protein_coding	C78339	exon	ENSMUSG00000069237	NonProperStrand	104	1	-7.1531
chr10	127564924	127564971	protein_coding	Baz2a	utr3	ENSMUSG00000040054	ProperStrand	274	chr4	131866205	131866292	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-1.1674
chr7	29573509	29573568	protein_coding	Sirt2	utr3	ENSMUSG00000015149	ProperStrand	4	chr11	69483237	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-7.8378
chr3	87383617	87383696	LINE	L1MC	L1	chr3L1MC87383573	NonProperStrand	1	chr3	87383448	87383538	SINE	B3A	B2	chr3B3A87383378	ProperStrand	1	1	-inf
chr4	149087552	149087569	SINE	B4	B4	chr4B4149087494	NonProperStrand	12	chr18	35006950	35006969	protein_coding	Reep2	utr3	ENSMUSG00000038555	ProperStrand	2	1	-inf
chr2	156368131	156368149	protein_coding	Epb4.1l1	utr3	ENSMUSG00000027624	ProperStrand	27	chr3	154240410	154240426	protein_coding	Tyw3	utr3	ENSMUSG00000047583	ProperStrand	2	2	-inf
chr19	5801407	5801445	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr5	24834860	24834891	protein_coding	Mll3	utr5	ENSMUSG00000038056	ProperStrand	31	1	-8.8706
chr2	32434024	32434040	protein_coding	Pip5kl1	exon	ENSMUSG00000046854	NonProperStrand	8	chr4	135866954	135870042	protein_coding	Hnrnpr	utr5	ENSMUSG00000066037	ProperStrand	15	3	-21.6932
chr14	123344752	123349727	protein_coding	Tmtc4	exon	ENSMUSG00000041594	ProperStrand	3	chr16	23110973	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr4	32106783	32106934	protein_coding	Map3k7	utr3	ENSMUSG00000028284	ProperStrand	16	chr14	57293148	57293165	protein_coding	Mphosph8	exon	ENSMUSG00000079184	NonProperStrand	27	1	-17.4622
chr12	72085514	72085541	protein_coding	Psma3	exon	ENSMUSG00000060073	ProperStrand	20	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-4.8132
chr1	75484537	75484553	protein_coding	Obsl1	exon	ENSMUSG00000026211	NonProperStrand	192	chr2	25421638	25421656	protein_coding	Mamdc4	exon	ENSMUSG00000026941	ProperStrand	11	1	-14.4477
chr4	41276591	41276610	LTR	RLTR11A	ERVK	chr4RLTR11A41276258	ProperStrand	1	chr2	121169225	121169243	protein_coding	Ppip5k1	exon	ENSMUSG00000033526	ProperStrand	85	1	-inf
mmu-miR-6238	1	18	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr7	148634712	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	6	-10.6156
chr11	102294589	102294607	protein_coding	Grn	exon	ENSMUSG00000034708	ProperStrand	43	chr10	39978349	39978484	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	NonProperStrand	27	2	-inf
chr5	53461080	53461098	protein_coding	Slc34a2	utr3	ENSMUSG00000029188	NonProperStrand	3	chr4	116826719	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	2	-19.9179
chr10	77888499	77888520	protein_coding	Cstb	utr5	ENSMUSG00000005054	ProperStrand	10	chr11	55308757	55308828	protein_coding	G3bp1	exon	ENSMUSG00000018583	ProperStrand	106	2	-20.9297
chr7	71210829	71210919	LINE	L1MB2	L1	chr7L1MB271210765	NonProperStrand	1	chr7	71210508	71210598	LINE	L1MD1	L1	chr7L1MD171210058	NonProperStrand	1	1	-inf
chr12	36830875	36830910	protein_coding	Bzw2	exon	ENSMUSG00000020547	ProperStrand	29	chr16	23111708	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.1494
chr6	122263347	122263383	protein_coding	M6pr	exon	ENSMUSG00000007458	ProperStrand	56	chr1	162965531	162965555	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.4021
chr2	38440879	38440895	protein_coding	Nek6	exon	ENSMUSG00000026749	ProperStrand	10	chr4	135846171	135846187	protein_coding	Zfp46	exon	ENSMUSG00000051351	NonProperStrand	85	1	-16.2639
chr19	60905857	60905927	protein_coding	Fam45a	intron	ENSMUSG00000024993	NonProperStrand	2	chr7	148634789	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-11.3325
chr7	73208720	73214071	protein_coding	Snrpa1	exon	ENSMUSG00000030512	ProperStrand	71	chr5	147646793	147646849	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	3	-17.0988
chr3	51064947	51068830	protein_coding	Elf2	exon	ENSMUSG00000037174	ProperStrand	21	chr18	35714232	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	5	-21.8283
chr5	132661101	132661120	protein_coding	Auts2	intron	ENSMUSG00000029673	NonProperStrand	37	chr2	26493366	26493482	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-4.6603
chr8	109407964	109408009	protein_coding	Chtf8	utr3	ENSMUSG00000046691	ProperStrand	33	chr6	70805441	70805531	snoRNA	ENSMUSG00000065750_SNORA5	.	ENSMUSG00000065750	ProperStrand	165	6	-19.1699
chr1	63095478	63095600	protein_coding	Ino80d	utr3	ENSMUSG00000040865	ProperStrand	70	chr18	35714262	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-3.1624
chr7	117189863	117189922	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr8	32260335	32260408	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	5	-0.8607
chr11	87240289	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	chr17	24665481	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-2.7921
chr13	29043783	29043883	protein_coding	Sox4	exon	ENSMUSG00000076431	ProperStrand	73	chr10	23505150	23505204	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-6.2135
chr16	20344821	20357495	protein_coding	Abcc5	exon	ENSMUSG00000022822	ProperStrand	30	chr6	71832550	71832577	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-6.9850
chr15	80486634	80486652	LINE	L1MC1	L1	chr15L1MC180486370	NonProperStrand	1	chr5	64648235	64648296	protein_coding	Tbc1d1	exon	ENSMUSG00000029174	ProperStrand	44	1	-inf
chr1	167932738	167932755	protein_coding	Pou2f1	utr5	ENSMUSG00000026565	ProperStrand	34	chrX	98641550	98641566	protein_coding	Nono	exon	ENSMUSG00000031311	ProperStrand	102	1	-13.3932
chrX	101537850	101540275	protein_coding	Abcb7	exon	ENSMUSG00000031333	ProperStrand	22	chr2	26493391	26493481	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-5.6800
chr11	68840952	68840969	protein_coding	1500010J02Rik	exon	ENSMUSG00000020898	ProperStrand	38	chr17	24857777	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	3	-7.9071
chr2	8918427	8918444	LINE	Lx8	L1	chr2Lx88918354	NonProperStrand	1	chr15	34370620	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-inf
chr15	28216497	28216514	protein_coding	Dnahc5	intron	ENSMUSG00000022262	NonProperStrand	18	chr10	33879812	33879838	protein_coding	Dse	exon	ENSMUSG00000039497	ProperStrand	4	1	-19.8468
chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	chr15	100311922	100311938	protein_coding	Csrnp2	utr3	ENSMUSG00000044636	NonProperStrand	60	1	-10.7632
chr13	55589253	55589269	protein_coding	Dbn1	exon	ENSMUSG00000034675	ProperStrand	43	chr8	113362451	113362486	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	1	-9.9359
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr18	75161534	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	2	-2.9683
chr5	122580412	122584741	protein_coding	Ccdc63	utr5	ENSMUSG00000043036	ProperStrand	120	chr7	107525809	107525826	protein_coding	C2cd3	intron	ENSMUSG00000047248	ProperStrand	11	1	-15.3860
chr5	115940316	115940407	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	chr17	35299507	35299632	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	16	-20.9497
chr19	25484358	25484374	protein_coding	Kank1	exon	ENSMUSG00000032702	ProperStrand	218	chr15	93074726	93074760	protein_coding	Gxylt1	utr3	ENSMUSG00000036197	ProperStrand	12	1	-14.0147
mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr15	81524827	81524845	protein_coding	Chadl	exon	ENSMUSG00000063765	ProperStrand	28	1	-7.4204
chr17	26893547	26893566	protein_coding	A930001N09Rik	intron	ENSMUSG00000048249	NonProperStrand	5	chr18	33954817	33954907	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-8.5187
chr16	93875995	93876042	protein_coding	Morc3	utr3	ENSMUSG00000039456	ProperStrand	24	chr11	97642991	97643080	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-6.9807
chr18	34740572	34740588	protein_coding	4933408B17Rik	exon	ENSMUSG00000049357	NonProperStrand	3	chr18	80326529	80326548	protein_coding	Adnp2	exon	ENSMUSG00000053950	NonProperStrand	5	1	-inf
chr7	86494818	86494835	protein_coding	Abhd2	intron	ENSMUSG00000039202	NonProperStrand	12	chr17	24665439	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	2	-13.1286
chr14	35550471	35550561	protein_coding	Wapal	exon	ENSMUSG00000041408	ProperStrand	93	chr16	23111717	23111797	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.2531
chrX	71589885	71589904	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr19	8798489	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-2.3127
chr7	50124100	50124190	SINE	B2_Mm2	B2	chr7B2_Mm250124092	NonProperStrand	1	chr7	20576158	20576248	protein_coding	Ceacam20	utr3	ENSMUSG00000070777	NonProperStrand	1	1	-inf
chr7	26181911	26202421	protein_coding	Lipe	intron	ENSMUSG00000003123	NonProperStrand	63	chr4	131865384	131865444	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-3.9106
chr17	29840131	29840147	protein_coding	Ftsjd2	utr3	ENSMUSG00000024019	ProperStrand	31	chrX	93136011	93136027	protein_coding	Las1l	exon	ENSMUSG00000057421	ProperStrand	248	1	-11.8020
chr11	102661746	102661788	protein_coding	Gjc1	exon	ENSMUSG00000034520	ProperStrand	15	chr11	69481345	69481435	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.8683
chr16	4068993	4077764	protein_coding	Trap1	exon	ENSMUSG00000005981	ProperStrand	25	chr7	148634774	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-5.6811
chr11	51415626	51415670	protein_coding	Hnrnpab	intron	ENSMUSG00000020358	ProperStrand	124	chr8	129468837	129468858	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-3.0684
chr5	134789741	134789829	protein_coding	Gtf2i	intron	ENSMUSG00000060261	ProperStrand	41	chr7	116663661	116663751	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.1845
chr1	136246703	136246803	protein_coding	Tmem183a	exon	ENSMUSG00000042305	ProperStrand	10	chr11	69481335	69481386	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-6.6979
chr19	5380122	5380277	protein_coding	Sart1	exon	ENSMUSG00000039148	ProperStrand	32	chr1	162968481	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	4	-inf
chr14	76247751	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	chr4	122970392	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	12	-9.2379
chr4	147453685	147453767	protein_coding	Agtrap	utr3	ENSMUSG00000029007	ProperStrand	18	chr11	68887042	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	2	-10.5822
chr2	126472468	126472484	protein_coding	Gabpb1	exon	ENSMUSG00000027361	ProperStrand	54	chr7	30074412	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-10.6404
chr7	51505859	51505909	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	chr1	30862585	30862685	protein_coding	Phf3	exon	ENSMUSG00000048874	ProperStrand	102	1	-7.5559
chr1	88247800	88247835	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	chr8	113586458	113586542	tRNA	tRNA560-GlyGCC	.	667872	ProperStrand	34	1	-6.2127
chr15	34278946	34278962	protein_coding	Matn2	intron	ENSMUSG00000022324	NonProperStrand	5	chr5	115798646	115798873	protein_coding	Cox6a1	exon	ENSMUSG00000041697	ProperStrand	38	1	-18.4585
chr13	96247406	96248477	protein_coding	S100z	exon	ENSMUSG00000021679	NonProperStrand	43	chr2	145000846	145000864	protein_coding	Slc24a3	intron	ENSMUSG00000063873	ProperStrand	9	1	-17.9984
chr3	121869593	121869609	protein_coding	Abca4	exon	ENSMUSG00000028125	ProperStrand	10	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-11.8174
chr15	79659175	79659265	protein_coding	Npcd	exon	ENSMUSG00000089837	ProperStrand	11	chr7	150717316	150717396	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-8.9274
chr16	4039189	4039206	protein_coding	Dnase1	exon	ENSMUSG00000005980	NonProperStrand	17	chr11	115911375	115911442	protein_coding	Unk	exon	ENSMUSG00000020770	ProperStrand	21	1	-17.8161
chr3	96654255	96654271	protein_coding	Pdzk1	exon	ENSMUSG00000038298	ProperStrand	101	chr9	15119675	15119766	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.7723
chr6	148870915	148870932	protein_coding	Fam60a	utr3	ENSMUSG00000039985	NonProperStrand	3	chr4	131865865	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.6896
chr5	46085291	46085318	protein_coding	Ncapg	intron	ENSMUSG00000015880	ProperStrand	36	chr3	123210854	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	17	-inf
chr1	141385054	141385073	protein_coding	Aspm	exon	ENSMUSG00000033952	ProperStrand	64	chr6	71832550	71832650	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-5.4848
chr3	90312987	90313051	protein_coding	2500003M10Rik	intron	ENSMUSG00000001017	ProperStrand	28	chr11	69481386	69481476	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	5	-18.6456
chr19	42019238	42019846	protein_coding	Mms19	exon	ENSMUSG00000025159	ProperStrand	52	chr5	116060888	116061086	protein_coding	Gcn1l1	exon	ENSMUSG00000041638	ProperStrand	408	3	-20.1444
chr11	5441764	5441781	protein_coding	Ccdc117	intron	ENSMUSG00000020482	NonProperStrand	20	chr9	15119632	15119704	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-11.2663
chr2	90235294	90235330	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr13	105039492	105039594	protein_coding	Cenpk	exon	ENSMUSG00000021714	ProperStrand	1	1	-inf
chr8	127993731	127993748	protein_coding	Sipa1l2	exon	ENSMUSG00000001995	NonProperStrand	8	chr11	97642952	97643065	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-6.3446
chr10	90628780	90633838	protein_coding	Tmpo	exon	ENSMUSG00000019961	ProperStrand	57	chr2	130102006	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-5.4567
chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	chr11	98878350	98878406	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-2.0765
chr8	75018984	75019002	lincRNA	Gm17435	intron	ENSMUSG00000090373	ProperStrand	1	chr4	131908357	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-inf
chr3	93203545	93203635	SINE	B3	B2	chr3B393203446	ProperStrand	1	chr3	93203118	93203208	protein_coding	Rptn	utr3	ENSMUSG00000041984	ProperStrand	1	1	-inf
chr5	122017782	122022850	protein_coding	Aldh2	utr3	ENSMUSG00000029455	ProperStrand	108	chr4	131908236	131908440	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	9	-11.6717
chr19	41986563	41986609	protein_coding	Pgam1	exon	ENSMUSG00000011752	ProperStrand	124	chr2	130109497	130109513	protein_coding	Idh3b	exon	ENSMUSG00000027406	ProperStrand	146	1	-10.0713
chr5	30790882	30790898	protein_coding	Cib4	exon	ENSMUSG00000053194	ProperStrand	31	chr7	52382014	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-8.0324
chr2	90235314	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	122854212	122854229	protein_coding	Arpc3	exon	ENSMUSG00000029465	NonProperStrand	33	1	-5.6244
chr11	114763343	114763433	protein_coding	Cd300a	utr3	ENSMUSG00000034652	NonProperStrand	3	chr16	44180125	44180205	protein_coding	Gm608	intron	ENSMUSG00000068284	ProperStrand	17	1	-inf
chr2	121949510	121949526	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	chr18	35714144	35714245	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-1.0296
chr16	85802545	85802562	protein_coding	Adamts1	exon	ENSMUSG00000022893	ProperStrand	102	chr14	33005141	33005209	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-3.0198
chr13	64294022	64294089	protein_coding	Cdc14b	utr3	ENSMUSG00000033102	ProperStrand	9	chr10	23505164	23505254	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.5477
chr11	102776984	102777530	protein_coding	Kif18b	exon	ENSMUSG00000051378	ProperStrand	43	chr17	24857815	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.8722
chr11	104061157	104061237	LTR	RLTR20B2	ERVK	chr11RLTR20B2104060967	NonProperStrand	1	chr18	21600769	21600859	LTR	RLTR20B2	ERVK	chr18RLTR20B221600439	NonProperStrand	1	1	-inf
chr3	96001171	96001187	protein_coding	Bola1	exon	ENSMUSG00000015943	NonProperStrand	2	chr18	68038299	68040405	protein_coding	Cep192	exon	ENSMUSG00000024542	NonProperStrand	16	1	-inf
chr12	70260532	70260584	misc_RNA	AC099934.1	.	ENSMUSG00000092665	ProperStrand	45	chr11	120824175	120824238	protein_coding	Csnk1d	utr3	ENSMUSG00000025162	ProperStrand	37	1	-14.8682
chr1	165926132	165926148	protein_coding	2810422O20Rik	utr5	ENSMUSG00000041396	ProperStrand	4	chr8	73419703	73419739	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-8.6136
chr13	112540780	112541440	protein_coding	Map3k1	exon	ENSMUSG00000021754	ProperStrand	113	chr10	127521199	127521268	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	1	-7.5304
chr17	34089001	34089039	protein_coding	Rps18	exon	ENSMUSG00000008668	ProperStrand	111	chr8	32260335	32260424	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	2	-5.9099
chrX	143918835	143918913	snoRNA	ENSMUSG00000084421_SNORA35	.	ENSMUSG00000084421	ProperStrand	293	chr17	26360445	26360485	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	1	-6.8682
chr6	118980975	118980999	protein_coding	Cacna1c	intron	ENSMUSG00000051331	ProperStrand	46	chr7	29136555	29136600	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.8242
chr8	122052847	122052864	protein_coding	Mbtps1	exon	ENSMUSG00000031835	NonProperStrand	16	chr11	69481334	69481434	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.7383
chr11	98060765	98060855	LTR	RMER10A	ERVL	chr11RMER10A98060735	NonProperStrand	1	chr11	98060885	98060975	LTR	RMER10A	ERVL	chr11RMER10A98060897	ProperStrand	1	1	-inf
chr13	41733725	41733742	protein_coding	Tmem170b	utr3	ENSMUSG00000087370	ProperStrand	15	chr16	23110902	23111754	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-13.8679
chr14	15572354	15572371	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr1	59600637	59600656	protein_coding	Gm973	intron	ENSMUSG00000047361	NonProperStrand	13	1	-14.4036
chr15	81478806	81478863	protein_coding	Ep300	exon	ENSMUSG00000055024	ProperStrand	118	chr11	6428076	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.0297
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr6	24580446	24580548	protein_coding	Wasl	intron	ENSMUSG00000029684	ProperStrand	25	7	-20.2298
chr2	4559764	4559799	protein_coding-noncoding	Prpf18	utr3	ENSMUSG00000039449	ProperStrand	1	chr3	85944567	85944608	snoRNA	ENSMUSG00000064390_Rnu73b	.	ENSMUSG00000064390	ProperStrand	164	1	-inf
chr14	22165539	22165571	protein_coding	Adk	intron	ENSMUSG00000039197	ProperStrand	32	chr2	26493366	26493408	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-4.9420
chr4	101331015	101331031	protein_coding	Leprot	utr3	ENSMUSG00000035212	ProperStrand	22	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-12.4607
chr5	118376503	118376519	protein_coding	Nos1	exon	ENSMUSG00000029361	NonProperStrand	237	chr2	158182180	158182209	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-2.4756
chr17	87717767	87717853	protein_coding	Ttc7	intron	ENSMUSG00000036918	ProperStrand	6	chr7	150717298	150717341	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-10.2214
chr10	91951428	91951444	LTR	RLTR14-int	ERV1	chr10RLTR14-int91951024	ProperStrand	2	chr7	26507860	26507974	protein_coding	Hnrnpul1	exon	ENSMUSG00000040725	NonProperStrand	2	1	-inf
chr16	56035872	56035990	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	chr9	15118325	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-0.8190
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr1	161270445	161270554	snoRNA	ENSMUSG00000089536_Scarna3a	.	ENSMUSG00000089536	ProperStrand	247	2	-5.5073
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr16	23110499	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-1.0892
chr2	160546981	160547000	protein_coding-noncoding	Top1	utr5	ENSMUSG00000070544	ProperStrand	1	chr18	82773672	82773688	protein_coding	Zfp236	exon	ENSMUSG00000041258	NonProperStrand	117	1	-inf
chr1	63349595	63349665	protein_coding	Zdbf2	exon	ENSMUSG00000027520	ProperStrand	72	chr3	123210891	123210981	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-3.2627
chr11	80707576	80707593	protein_coding	Accn1	exon	ENSMUSG00000020704	ProperStrand	69	chr11	68886941	68887036	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	2	-6.5412
chr4	43505783	43505873	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr16	13413541	13413620	protein_coding	Mkl2	utr3	ENSMUSG00000009569	ProperStrand	55	1	-3.2273
chr11	3584672	3584864	protein_coding	Morc2a	exon	ENSMUSG00000034543	ProperStrand	62	chr18	35714144	35714209	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-3.3828
chr7	64845987	64846004	protein_coding	Gabrb3	exon	ENSMUSG00000033676	ProperStrand	16	chr11	102294590	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	1	-11.5767
chr7	148581997	148584409	protein_coding	Taldo1	exon	ENSMUSG00000025503	ProperStrand	28	chrX	34622910	34622990	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-4.6018
chr9	27134448	27134538	protein_coding	Igsf9b	exon	ENSMUSG00000034275	ProperStrand	18	chr1	161270464	161270544	snoRNA	ENSMUSG00000089536_Scarna3a	.	ENSMUSG00000089536	ProperStrand	247	1	-12.9206
chr5	77351243	77351295	protein_coding	Ppat	exon	ENSMUSG00000029246	ProperStrand	55	chr10	110918549	110918639	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-3.6092
chr13	29683031	29683115	protein_coding	Cdkal1	intron	ENSMUSG00000006191	ProperStrand	43	chr13	51743568	51743658	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	3	-16.9207
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr8	98269959	98270096	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	3	-2.0358
chr3	144798296	144798386	protein_coding	Odf2l	intron	ENSMUSG00000028256	ProperStrand	10	chr1	162967145	162967164	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	3	-inf
chr17	30356886	30356986	protein_coding	Btbd9	utr3	ENSMUSG00000062202	ProperStrand	31	chr10	39978419	39978484	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-6.7654
chrX	82529778	82529798	LINE	L1MD3	L1	chrXL1MD382529257	NonProperStrand	1	chr15	79912938	79912958	protein_coding	Rpl3	exon	ENSMUSG00000060036	ProperStrand	8342	1	-inf
chr7	34239478	34239498	LTR	ETnERV2-int	ERVK	chr7ETnERV2-int34237287	NonProperStrand	1	chr11	6428060	6428159	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-inf
chr17	39980024	39980068	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	NonProperStrand	5	chr4	131865909	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	NonProperStrand	39	1	-18.1128
chr5	104213168	104213184	protein_coding	Aff1	exon	ENSMUSG00000029313	ProperStrand	82	chr10	90581165	90581217	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-4.2104
chr5	74489303	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr1	155303268	155303309	protein_coding	Dhx9	exon	ENSMUSG00000042699	ProperStrand	98	1	-4.6709
chr1	3498994	3499013	protein_coding	Xkr4	intron	ENSMUSG00000051951	ProperStrand	59	chr16	23111373	23111418	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.2821
chr13	56840830	56840876	protein_coding	Smad5	utr3	ENSMUSG00000021540	ProperStrand	47	chr9	120038610	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.4829
chr6	54283036	54283053	lincRNA	9130019P16Rik	intron	ENSMUSG00000073067	NonProperStrand	2	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-15.1780
chr2	157902395	157902495	protein_coding	Rprd1b	utr3	ENSMUSG00000027651	ProperStrand	33	chr16	23111466	23111498	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.1725
chr2	147487753	147487774	LINE	L2	L2	chr2L2147487597	NonProperStrand	1	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-inf
chr11	101606488	101606539	protein_coding	Dhx8	exon	ENSMUSG00000034931	ProperStrand	48	chr16	23110454	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-4.9625
chr14	21319699	21319758	protein_coding	Ppp3cb	utr3	ENSMUSG00000021816	ProperStrand	17	chr11	6428091	6428155	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-13.2152
chr12	99756958	99756974	protein_coding	Kcnk10	exon	ENSMUSG00000033854	NonProperStrand	37	chr11	62416578	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-6.1154
chr11	50108880	50110881	protein_coding	Canx	exon	ENSMUSG00000020368	ProperStrand	296	chr10	110918549	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-1.8382
chr17	23955732	23957678	protein_coding	Srrm2	utr3	ENSMUSG00000039218	ProperStrand	521	chr1	162965539	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-1.2896
chr5	114295345	114295406	protein_coding	Coro1c	exon	ENSMUSG00000004530	ProperStrand	44	chr10	94151578	94151595	protein_coding	Ccdc41	utr5	ENSMUSG00000020024	NonProperStrand	34	1	-15.0875
chr1	75484537	75484553	protein_coding	Obsl1	exon	ENSMUSG00000026211	NonProperStrand	192	chr7	52378425	52378481	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	1	-6.1962
chr2	26447192	26447208	protein_coding	Egfl7	exon	ENSMUSG00000026921	ProperStrand	44	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-8.3608
chr11	98015880	98015919	protein_coding	Med1	utr3	ENSMUSG00000018160	ProperStrand	23	chr7	116663634	116663746	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	6	-inf
chr9	15119971	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	chr2	26493365	26493466	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	6	-1.4844
chr5	137963439	137963693	protein_coding	Epo	intron	ENSMUSG00000029711	ProperStrand	27	chr9	120038603	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	NonProperStrand	28	1	-16.4889
chr4	108278918	108278934	protein_coding	Orc1	exon	ENSMUSG00000028587	ProperStrand	161	chr5	116063797	116064100	protein_coding	Gcn1l1	exon	ENSMUSG00000041638	ProperStrand	408	1	-7.5034
chr11	5180669	5180685	protein_coding	Znrf3	utr3	ENSMUSG00000041961	NonProperStrand	210	chr3	130431689	130431709	protein_coding	Rpl34	exon	ENSMUSG00000062006	ProperStrand	51	1	-11.1284
chr11	4820972	4820990	protein_coding	Thoc5	intron	ENSMUSG00000034274	ProperStrand	325	chr12	110874223	110874290	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	1	-6.6136
chr9	56266647	56266664	protein_coding	Hmg20a	utr5	ENSMUSG00000032329	ProperStrand	87	chr11	97643012	97643080	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.8614
chr6	41648170	41648191	protein_coding	Kel	intron	ENSMUSG00000029866	ProperStrand	2	chr5	121655089	121655126	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-11.0755
chr2	90235302	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	102634604	102634694	protein_coding	Amotl2	utr3	ENSMUSG00000032531	ProperStrand	54	1	-4.6647
chr2	105515406	105515423	protein_coding	Pax6	utr5	ENSMUSG00000027168	ProperStrand	13	chr7	116664870	116664924	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-5.4346
chr11	60565866	60567430	protein_coding	Top3a	exon	ENSMUSG00000002814	ProperStrand	28	chr16	84977574	84977590	protein_coding	App	intron	ENSMUSG00000022892	NonProperStrand	101	1	-13.8090
chr10	127750985	127751072	protein_coding	Pan2	exon	ENSMUSG00000005682	ProperStrand	53	chr9	63868722	63868738	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	1	-8.8356
chr5	74489543	74489563	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr9	21490460	21490476	protein_coding	Smarca4	exon	ENSMUSG00000032187	ProperStrand	196	1	-3.3739
chr7	25295618	25295647	protein_coding	Zfp428	utr5	ENSMUSG00000064264	ProperStrand	23	chr4	131908356	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-5.2237
chr2	150712565	150712659	protein_coding	Abhd12	intron	ENSMUSG00000032046	ProperStrand	38	chr18	35716849	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.9566
chr2	154341582	154341682	protein_coding	Cbfa2t2	exon	ENSMUSG00000038533	ProperStrand	99	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-5.9937
chr7	52116210	52116290	protein_coding-noncoding	Pnkp	utr5	ENSMUSG00000002963	NonProperStrand	1	chr7	52115577	52115667	protein_coding	Pnkp	intron	ENSMUSG00000002963	NonProperStrand	7	1	-inf
chr5	130536150	130536166	protein_coding	Crcp	utr3	ENSMUSG00000025532	ProperStrand	6	chr9	32064600	32064732	protein_coding	Arhgap32	exon	ENSMUSG00000041444	ProperStrand	37	1	-18.1658
chr11	103256265	103256355	protein_coding	Plekhm1	exon	ENSMUSG00000034247	ProperStrand	23	chr7	116664794	116664874	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-4.3088
chr4	59766121	59766137	protein_coding	E130308A19Rik	utr3	ENSMUSG00000045071	ProperStrand	41	chr7	52975733	52975795	protein_coding	Rpl18	exon	ENSMUSG00000059070	ProperStrand	116	1	-12.7574
chr9	31959545	32015843	protein_coding	Arhgap32	utr5	ENSMUSG00000041444	ProperStrand	37	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-8.2137
chr16	35651584	35651635	protein_coding	Sema5b	exon	ENSMUSG00000052133	ProperStrand	9	chr11	106362336	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-9.6932
chr13	85339972	85339989	protein_coding	Ccnh	intron	ENSMUSG00000021548	NonProperStrand	2	chr16	23111448	23111503	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-8.0851
chr4	116364511	116364569	protein_coding	Prdx1	intron	ENSMUSG00000028691	ProperStrand	41	chr9	120037992	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-5.4456
chr9	26943599	26943630	protein_coding	Jam3	intron	ENSMUSG00000031990	ProperStrand	30	chr7	117166754	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-6.1751
chr13	24567507	24567567	protein_coding	Cmah	utr3	ENSMUSG00000016756	NonProperStrand	53	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.6010
chr12	111854710	111854800	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr17	35299564	35299642	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-0.8334
chr5	137791432	137791448	protein_coding	Ephb4	utr5	ENSMUSG00000029710	ProperStrand	49	chr19	37223549	37223566	protein_coding	Cpeb3	intron	ENSMUSG00000039652	NonProperStrand	23	1	-15.6592
chr5	130300417	130300440	protein_coding	Cct6a	intron	ENSMUSG00000029447	ProperStrand	128	chr4	116862547	116862663	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	4	-19.8888
chr1	36528459	36528535	protein_coding	Cnnm4	utr5	ENSMUSG00000037408	ProperStrand	12	chr13	21332851	21332886	tRNA	tRNA68-AlaTGC	.	1271159	ProperStrand	8	1	-19.1875
chr3	88497893	88497984	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	chr5	23358062	23358088	snoRNA	ENSMUSG00000093321_Snord93	.	ENSMUSG00000093321	ProperStrand	218	1	-4.9278
chr7	17040701	17040717	protein_coding	Tmem160	exon	ENSMUSG00000019158	ProperStrand	55	chr15	12066252	12066306	protein_coding	Zfr	exon	ENSMUSG00000022201	ProperStrand	48	1	-13.9340
chr1	46132882	46132919	protein_coding	Dnahc7b	intron	ENSMUSG00000041144	NonProperStrand	57	chr10	110918554	110918644	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-3.5431
chr1	29666277	29666294	LTR	MMERVK10C-int	ERVK	chr1MMERVK10C-int29665214	ProperStrand	10	chr9	49353803	49354265	protein_coding	Ncam1	exon	ENSMUSG00000039542	ProperStrand	18	1	-19.1178
chr11	113613108	113613124	protein_coding	Cdc42ep4	utr5	ENSMUSG00000041598	ProperStrand	56	chr17	24857716	24857775	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-4.2773
chr6	89306479	89306537	protein_coding	Plxna1	exon	ENSMUSG00000030084	ProperStrand	233	chr2	26767563	26767653	protein_coding	Rpl7a	exon	ENSMUSG00000062647	ProperStrand	234	1	-7.8722
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr15	98688570	98689980	protein_coding	Mll2	exon	ENSMUSG00000048154	ProperStrand	170	1	-6.8310
chr9	83678800	83681879	protein_coding	Elovl4	exon	ENSMUSG00000032262	ProperStrand	159	chr2	130103751	130103808	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-6.5347
chr11	118345401	118345418	protein_coding	Engase	intron	ENSMUSG00000033857	ProperStrand	12	chr5	108336363	108336442	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-8.1013
chr4	19577470	19577491	protein_coding	Gm12353	intron	ENSMUSG00000078772	ProperStrand	4	chr16	23111703	23111793	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-12.0512
chr9	21392681	21392725	protein_coding	Carm1	utr3	ENSMUSG00000032185	ProperStrand	82	chr9	120039578	120039678	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.7603
chr11	70809501	70809538	protein_coding	Dhx33	exon	ENSMUSG00000040620	ProperStrand	41	chr1	162965562	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.9824
chr15	91881638	91881654	protein_coding	Cntn1	utr5	ENSMUSG00000055022	NonProperStrand	16	chr18	48207026	48207156	protein_coding	Gm5506	exon	ENSMUSG00000059040	NonProperStrand	2	2	-inf
chr6	16190713	16190803	LINE	L1_Mus4	L1	chr6L1_Mus416190462	ProperStrand	1	chr6	16540325	16540415	LINE	Lx5	L1	chr6Lx516540346	ProperStrand	1	1	-inf
chr2	90235293	90235345	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	15119285	15119426	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	53	-inf
chr11	97643035	97643080	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	chr11	97631139	97631177	tRNA	tRNA1444-CysGCA	.	679661	ProperStrand	91	2	-3.2823
chr6	87769189	87769558	protein_coding	Isy1	exon	ENSMUSG00000030056	ProperStrand	172	chr13	38042564	38042592	protein_coding	Rreb1	utr3	ENSMUSG00000039087	ProperStrand	33	1	-12.4067
chr4	137211161	137212173	protein_coding	Usp48	utr3	ENSMUSG00000043411	ProperStrand	135	chr5	130300535	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.2469
chr1	89307238	89307280	protein_coding	Gigyf2	exon	ENSMUSG00000048000	ProperStrand	128	chr6	125136376	125136397	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	1	-4.9608
chr10	82104072	82104162	protein_coding	Tdg	exon	ENSMUSG00000034674	ProperStrand	42	chr4	131866169	131866249	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-4.3372
chr8	109285209	109285233	protein_coding	Tmco7	intron	ENSMUSG00000041949	NonProperStrand	15	chr4	63240338	63240355	protein_coding	6330416G13Rik	intron	ENSMUSG00000045917	NonProperStrand	23	1	-17.8173
chr9	110290777	110290867	protein_coding	Ptpn23	exon	ENSMUSG00000036057	ProperStrand	34	chr4	122968582	122968662	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-7.4117
chr5	123045841	123045859	protein_coding	Ift81	intron	ENSMUSG00000029469	ProperStrand	14	chr17	36066997	36067013	protein_coding	Ppp1r10	exon	ENSMUSG00000039220	NonProperStrand	6	1	-20.8732
chr4	43505743	43505823	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr13	55348527	55348617	protein_coding	Nsd1	exon	ENSMUSG00000021488	ProperStrand	186	1	-1.2477
chr19	6307507	6307534	protein_coding	Cdc42bpg	intron	ENSMUSG00000024769	ProperStrand	90	chr8	36529522	36529538	protein_coding	Eri1	utr3	ENSMUSG00000031527	NonProperStrand	97	1	-11.5334
chr2	164388819	164388845	protein_coding	Wfdc2	exon	ENSMUSG00000017723	ProperStrand	9	chr17	24857717	24857751	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-5.8950
chr11	52066587	52066665	protein_coding	Tcf7	utr3	ENSMUSG00000000782	ProperStrand	24	chr19	8963023	8963065	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.9221
chrX	91435606	91435655	protein_coding	Eif2s3x	utr3	ENSMUSG00000035150	ProperStrand	55	chr3	123210854	123210889	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-3.9567
chr9	48831959	48832049	protein_coding	Usp28	intron	ENSMUSG00000032267	ProperStrand	63	chr5	121655052	121655132	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	4	-12.1142
chr11	106937872	106937891	protein_coding	Bptf	exon	ENSMUSG00000040481	ProperStrand	70	chr16	23111753	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-4.7725
chr6	122679919	122680009	protein_coding	Slc2a3	utr3	ENSMUSG00000003153	ProperStrand	682	chr13	55802046	55802126	protein_coding	B230219D22Rik	utr3	ENSMUSG00000045767	ProperStrand	19	1	-10.7784
chr7	20309555	20309649	protein_coding	Pvrl2	utr3	ENSMUSG00000062300	ProperStrand	110	chr15	5068432	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	4	-15.2480
chr4	149022616	149022729	protein_coding	Clstn1	utr3	ENSMUSG00000039953	ProperStrand	173	chr1	102076757	102076789	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	1	-7.3225
chr10	39978369	39978469	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	chr14	31829399	31829466	snoRNA	ENSMUSG00000077797_Snord19	.	ENSMUSG00000077797	ProperStrand	62	1	-5.3955
chr8	73051744	73051761	protein_coding	Fkbp8	utr5	ENSMUSG00000019428	ProperStrand	52	chr8	12757419	12757437	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-8.8801
chr14	80262508	80262525	lincRNA	Gm6999	intron	ENSMUSG00000075495	ProperStrand	265	chr4	131826027	131826089	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	1	-6.2662
chr11	102060738	102060754	protein_coding	Hdac5	exon	ENSMUSG00000008855	NonProperStrand	39	chr9	78327218	78327298	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-7.1908
chr1	36996309	36996361	protein_coding	Tmem131	utr5	ENSMUSG00000026116	ProperStrand	129	chr1	10141947	10143475	protein_coding	Arfgef1	exon	ENSMUSG00000067851	NonProperStrand	27	1	-13.3926
chr3	20238638	20238656	protein_coding	Agtr1b	intron	ENSMUSG00000054988	NonProperStrand	39	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.0770
chr19	12793320	12793339	protein_coding	Keg1	exon	ENSMUSG00000024694	ProperStrand	7	chr7	116664841	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-15.9437
chr12	88412857	88412880	protein_coding	Tmem63c	exon	ENSMUSG00000034145	ProperStrand	8	chr4	131908689	131908795	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-8.0930
chr3	135205364	135207702	protein_coding	Manba	exon	ENSMUSG00000028164	ProperStrand	18	chr1	162965534	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-13.1504
chr1	137271110	137271126	protein_coding	Shisa4	exon	ENSMUSG00000041889	ProperStrand	64	chr16	23110525	23110572	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.3523
chr17	84594111	84594216	protein_coding	Thada	intron	ENSMUSG00000024251	ProperStrand	47	chr2	144087324	144087356	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-7.0307
chr13	73653405	73653440	protein_coding	Lpcat1	utr3	ENSMUSG00000021608	ProperStrand	42	chr10	110918547	110918638	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-4.1148
chr14	118660119	118660135	lincRNA	Gm4675	exon	ENSMUSG00000090534	ProperStrand	2	chr9	115219293	115219343	protein_coding	Stt3b	utr5	ENSMUSG00000032437	ProperStrand	66	1	-inf
chr11	3589635	3589676	protein_coding	Morc2a	utr3	ENSMUSG00000034543	ProperStrand	62	chr8	98269959	98270065	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	5	-21.0507
chr19	17894928	17895018	protein_coding	Pcsk5	intron	ENSMUSG00000024713	ProperStrand	7	chr18	39069079	39069169	protein_coding	Fgf1	intron	ENSMUSG00000036585	ProperStrand	14	1	-inf
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	3	-7.1158
chr14	3929706	3930912	protein_coding	Gm3002	intron	ENSMUSG00000079399	ProperStrand	26	chr7	29136525	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-6.5617
chr3	66100724	66100740	protein_coding	Veph1	utr5	ENSMUSG00000027831	NonProperStrand	92	chr7	87225335	87225378	protein_coding	Zfp710	intron	ENSMUSG00000048897	ProperStrand	229	1	-9.7694
chr1	55135164	55135181	protein_coding	Hspd1	exon	ENSMUSG00000025980	ProperStrand	140	chr19	8799851	8799894	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-3.3520
chr7	125897330	125897420	protein_coding	9030624J02Rik	exon	ENSMUSG00000030982	ProperStrand	18	chr7	148634736	148634816	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-6.3384
chr10	18393547	18393563	protein_coding	D10Bwg1379e	intron	ENSMUSG00000019852	NonProperStrand	120	chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	1	-10.2936
chr2	80481245	80481268	protein_coding	Nup35	intron	ENSMUSG00000026999	ProperStrand	1	chr4	131908689	131908788	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-inf
chr9	120864320	120868868	protein_coding	Ctnnb1	exon	ENSMUSG00000006932	ProperStrand	214	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-2.7308
chr1	153636008	153636030	protein_coding	Edem3	intron	ENSMUSG00000043019	ProperStrand	84	chr2	26494715	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.5159
chr5	129526101	129526120	protein_coding	Ran	utr5	ENSMUSG00000029430	ProperStrand	82	chr4	131908236	131908329	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.9981
chr7	52958453	52958469	protein_coding	Car11	exon	ENSMUSG00000003273	NonProperStrand	250	chr7	52382753	52382832	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	2	-6.6905
chr15	78405773	78405792	SINE	RSINE1	B4	chr15RSINE178405745	ProperStrand	1	chr11	106362304	106362324	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-inf
chr3	104602445	104602664	protein_coding	Mov10	exon	ENSMUSG00000002227	ProperStrand	96	chr2	144413258	144413278	protein_coding	Sec23b	exon	ENSMUSG00000027429	ProperStrand	42	12	-19.7156
chr12	87822059	87822149	protein_coding	Esrrb	intron	ENSMUSG00000021255	ProperStrand	254	chr17	46168858	46168938	protein_coding	Vegfa	utr5	ENSMUSG00000023951	ProperStrand	43	1	-11.0919
chr17	43843088	43843104	protein_coding	Cyp39a1	intron	ENSMUSG00000023963	NonProperStrand	81	chr11	57865169	57865198	protein_coding	Larp1	exon	ENSMUSG00000037331	ProperStrand	201	1	-10.2853
chr1	72290877	72290974	snRNA	ENSMUSG00000093111_AC120136.1	.	ENSMUSG00000093111	ProperStrand	137	chr16	23110529	23110577	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-2.2956
chr19	15983842	15989356	protein_coding	Psat1	exon	ENSMUSG00000024640	ProperStrand	33	chr15	34370545	34370635	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-4.6811
chr10	79173513	79173552	protein_coding	Bsg	exon	ENSMUSG00000023175	ProperStrand	107	chr2	26494708	26494826	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.1113
chr6	71832544	71832576	protein_coding	Ptcd3	intron	ENSMUSG00000063884	ProperStrand	34	chr11	74718976	74719009	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	3	-19.8703
chr2	26340776	26340832	protein_coding	Notch1	exon	ENSMUSG00000026923	ProperStrand	145	chr8	73419649	73419724	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-1.6541
chr14	27446433	27446452	protein_coding	Fam116a	exon	ENSMUSG00000040818	ProperStrand	23	chr11	97643033	97643080	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.2234
chr13	38437929	38437946	protein_coding	Bmp6	utr5	ENSMUSG00000039004	ProperStrand	21	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-9.8459
chr1	181699458	181699541	protein_coding	Ahctf1	exon	ENSMUSG00000026491	ProperStrand	39	chr3	108357255	108357311	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-5.3750
chr16	36846617	36846664	protein_coding	Iqcb1	intron	ENSMUSG00000022837	ProperStrand	11	chr15	98350145	98350256	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	6	-21.2767
chr1	133141328	133141344	protein_coding	Rassf5	exon	ENSMUSG00000026430	ProperStrand	73	chr4	131866155	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	4	-11.1739
chr4	10480845	10480864	lincRNA	1700123O12Rik	intron	ENSMUSG00000086080	ProperStrand	5	chr16	23110912	23111002	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr1	37898095	37921899	protein_coding	Tsga10	utr5	ENSMUSG00000060771	ProperStrand	79	chr16	23110841	23110942	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-0.8955
chr2	32818104	32818142	protein_coding	Rpl12	exon	ENSMUSG00000038900	ProperStrand	167	chr16	23111772	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	7	-7.2407
chr9	15119287	15119357	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	chr3	88497863	88497953	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	5	-3.7859
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr12	112779195	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-1.0462
chr7	16524090	16524190	protein_coding	Gltscr2	intron	ENSMUSG00000041560	ProperStrand	127	chr7	117189991	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.0361
chr5	35162894	35164360	protein_coding	Htt	exon	ENSMUSG00000029104	ProperStrand	73	chr11	106362668	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-7.0143
chr4	133276692	133276735	protein_coding	Arid1a	exon	ENSMUSG00000007880	ProperStrand	465	chr14	100329856	100329874	protein_coding	Klf12	intron	ENSMUSG00000072294	NonProperStrand	7	1	-13.6374
chr8	126088217	126088259	rRNA	n-R5s115	.	ENSMUSG00000075862	ProperStrand	31	chr4	131865884	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.8751
chr17	57039485	57039503	protein_coding	Mllt1	exon	ENSMUSG00000024212	ProperStrand	19	chr2	130101255	130101308	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-8.9038
chr9	64906101	64906124	protein_coding	Dpp8	intron	ENSMUSG00000032393	ProperStrand	31	chr9	120037929	120038029	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-5.9972
chr2	90235315	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	101051320	101051336	LTR	RMER13B	ERVK	chr8RMER13B101050623	NonProperStrand	8	1	-8.5166
chr2	156541703	156541803	protein_coding	Dlgap4	intron	ENSMUSG00000061689	ProperStrand	80	chr1	89673562	89673608	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	17	-inf
chr6	124781479	124781569	protein_coding-noncoding	Cdca3	utr5	ENSMUSG00000023505	ProperStrand	4	chr13	20674120	20681524	protein_coding	Elmo1	exon	ENSMUSG00000041112	ProperStrand	11	1	-19.4425
chr2	138188029	138188045	protein_coding	Btbd3	intron	ENSMUSG00000062098	NonProperStrand	121	chr11	106362637	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-6.0170
chr9	108394835	108394866	protein_coding	Usp19	utr5	ENSMUSG00000006676	ProperStrand	57	chr10	80641693	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	1	-7.6506
chr19	42189533	42189559	protein_coding	Pi4k2a	exon	ENSMUSG00000025178	ProperStrand	23	chr11	68886974	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-6.0115
chr11	21040678	21042561	protein_coding	Peli1	exon	ENSMUSG00000020134	ProperStrand	69	chr5	108336380	108336495	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	5	-18.3509
chr7	116663633	116663759	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	chr16	20684337	20684361	snoRNA	ENSMUSG00000077239_Snord66	.	ENSMUSG00000077239	ProperStrand	159	5	-6.3589
chr13	56353448	56353465	protein_coding	Neurog1	utr5	ENSMUSG00000048904	ProperStrand	105	chr7	117190015	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.3492
chr13	74494655	74494671	protein_coding	Ccdc127	utr3	ENSMUSG00000021578	NonProperStrand	54	chr7	121898286	121898304	protein_coding	Insc	intron	ENSMUSG00000048782	ProperStrand	9	1	-17.3266
chr6	122681411	122681461	protein_coding	Slc2a3	exon	ENSMUSG00000003153	ProperStrand	682	chr5	65632339	65632797	protein_coding	Wdr19	exon	ENSMUSG00000037890	ProperStrand	71	1	-8.1143
chr11	9033042	9033142	protein_coding-noncoding	Upp1	utr5	ENSMUSG00000020407	ProperStrand	16	chr11	9032513	9032573	protein_coding	Upp1	intron	ENSMUSG00000020407	ProperStrand	73	16	-inf
chr11	76224568	76224584	protein_coding	Timm22	intron	ENSMUSG00000020843	NonProperStrand	5	chr6	71832629	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-10.7330
chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	chr8	13416896	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-2.7991
chr17	29831760	29831787	protein_coding	Ftsjd2	exon	ENSMUSG00000024019	ProperStrand	31	chr7	150717298	150717348	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	2	-11.0105
chr10	88619923	88619943	protein_coding	Ano4	intron	ENSMUSG00000035189	ProperStrand	21	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.5891
chr8	125418171	125540519	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	chr4	131866155	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	17	-inf
chr12	11324800	11324816	protein_coding	Smc6	utr3	ENSMUSG00000020608	NonProperStrand	2	chr11	120148960	120148976	protein_coding	Bahcc1	exon	ENSMUSG00000039741	NonProperStrand	268	1	-17.9073
chr10	80005035	80005125	protein_coding	Rexo1	utr3	ENSMUSG00000047417	ProperStrand	46	chr5	130295414	130295494	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-5.7685
chr6	122680108	122680151	protein_coding	Slc2a3	exon	ENSMUSG00000003153	ProperStrand	682	chr13	74477065	74477093	protein_coding	Sdha	exon	ENSMUSG00000021577	ProperStrand	70	1	-8.1426
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr19	8799022	8799091	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-1.1479
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	NonProperStrand	1	chr16	23111692	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	NonProperStrand	47	1	-inf
chr12	102297023	102297040	protein_coding	Smek1	exon	ENSMUSG00000041846	ProperStrand	66	chr9	44317534	44317606	protein_coding	Bcl9l	exon	ENSMUSG00000063382	ProperStrand	12	2	-20.4619
chr4	43043852	43043877	protein_coding	Stoml2	exon	ENSMUSG00000028455	ProperStrand	8	chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	1	-13.3216
chr1	46078109	46078129	protein_coding	Gm4776	utr3	ENSMUSG00000044457	NonProperStrand	24	chr10	23505152	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.6868
chr4	148860863	148860963	protein_coding	Lzic	utr5	ENSMUSG00000028990	ProperStrand	9	chr19	8799048	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-9.6830
chr8	69229035	69229052	protein_coding	Npy1r	exon	ENSMUSG00000036437	NonProperStrand	3	chr1	162965530	162965547	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-9.4650
chr1	63225262	63225322	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	chr5	147646410	147646460	snoRNA	ENSMUSG00000077185_SNORD102	.	ENSMUSG00000077185	ProperStrand	142	1	-7.1190
mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr4	150538028	150538044	protein_coding	Camta1	exon	ENSMUSG00000014592	ProperStrand	170	1	-3.9020
chr6	32537938	32537957	protein_coding	Plxna4	utr5	ENSMUSG00000029765	NonProperStrand	15	chr7	26509675	26509740	protein_coding	Hnrnpul1	exon	ENSMUSG00000040725	ProperStrand	84	1	-15.4755
chr12	111929632	111929662	protein_coding	Hsp90aa1	utr3	ENSMUSG00000021270	ProperStrand	751	chr7	118219572	118219662	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	4	-2.4065
chr9	111161029	111164006	protein_coding	Mlh1	exon	ENSMUSG00000032498	ProperStrand	13	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-11.2885
chr19	3904233	3904250	protein_coding	Tcirg1	exon	ENSMUSG00000001750	ProperStrand	77	chr16	23110525	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.0467
chr1	39443037	39446212	protein_coding	Tbc1d8	exon	ENSMUSG00000003134	ProperStrand	8	chr5	74489585	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-7.7916
chr5	100855903	100855943	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr9	77622894	77622913	protein_coding	Gclc	exon	ENSMUSG00000032350	ProperStrand	49	1	-7.0403
chr15	101948499	101948589	protein_coding	Spryd3	exon	ENSMUSG00000036966	ProperStrand	14	chr14	76247713	76247793	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-7.0446
chr7	135381777	135381795	protein_coding	Armc5	exon	ENSMUSG00000042178	NonProperStrand	2	chr11	106362556	106362634	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-14.8626
chr5	37187086	37187168	protein_coding	Mrfap1	utr3	ENSMUSG00000055302	ProperStrand	62	chr7	116663715	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.4557
chr2	90235299	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	48410411	48410428	protein_coding	Sspo	exon	ENSMUSG00000029797	NonProperStrand	94	1	-3.6186
chr2	9985830	9985866	protein_coding	Atp5c1	exon	ENSMUSG00000025781	ProperStrand	138	chr4	131908236	131908274	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-1.7604
chr9	61761165	61761255	protein_coding	Rplp1	exon	ENSMUSG00000007892	ProperStrand	116	chr17	24857722	24857803	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.2820
chr4	135606200	135606235	protein_coding	Rpl11	exon	ENSMUSG00000059291	ProperStrand	152	chr9	120038552	120038605	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.5081
chr4	133574127	133574143	protein_coding	Lin28a	exon	ENSMUSG00000050966	ProperStrand	55	chr12	110874223	110874277	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	1	-10.1527
chr8	7721270	7721288	LINE	Lx8	L1	chr8Lx87721239	NonProperStrand	4	chr16	23110828	23110891	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.6489
chrX	93360805	93361356	protein_coding	Msn	exon	ENSMUSG00000031207	ProperStrand	71	chr11	99885311	99885327	protein_coding	Krt33b	exon	ENSMUSG00000057723	NonProperStrand	352	1	-9.4307
chr19	54107184	54107200	protein_coding	Shoc2	utr3	ENSMUSG00000024976	ProperStrand	5	chr14	33005175	33005224	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-9.0442
chr14	78906326	78906356	protein_coding	Akap11	intron	ENSMUSG00000022016	ProperStrand	44	chr5	92485086	92485186	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	1	-9.3626
chr7	91258331	91258347	protein_coding	Fam108c	utr3	ENSMUSG00000038459	NonProperStrand	65	chr2	26494724	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	26	-19.1985
chr9	70959121	70959137	protein_coding	Aqp9	utr3	ENSMUSG00000032204	NonProperStrand	118	chr9	105546700	105546717	protein_coding	Pik3r4	exon	ENSMUSG00000032571	ProperStrand	49	1	-12.3645
chr15	38950400	38950893	protein_coding	Dcaf13	exon	ENSMUSG00000022300	ProperStrand	8	chr5	27919298	27919315	protein_coding	Dpp6	intron	ENSMUSG00000061576	NonProperStrand	32	1	-18.1730
chr5	147922262	147922294	protein_coding	Polr1d	exon	ENSMUSG00000029642	ProperStrand	23	chr4	131908689	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-4.8408
chr5	74489203	74489293	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr9	67813315	67813355	protein_coding	Vps13c	exon	ENSMUSG00000035284	ProperStrand	69	1	-5.3489
chr4	133212499	133212545	SINE	MIRc	MIR	chr4MIRc133212508	ProperStrand	1	chr11	77995189	77995228	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-inf
chr19	10938114	10938502	protein_coding	Tmem132a	exon	ENSMUSG00000024736	ProperStrand	26	chr9	120038625	120038672	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.6046
chr7	19933885	19933904	protein_coding	Ercc1	exon	ENSMUSG00000003549	NonProperStrand	35	chr1	162965993	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-7.6940
chr11	60657676	60657766	protein_coding	Dhrs7b	exon	ENSMUSG00000042569	ProperStrand	5	chr9	64143736	64143816	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-12.9299
chr11	75570387	75570495	protein_coding	Ywhae	exon	ENSMUSG00000020849	ProperStrand	176	chr7	67123702	67123743	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	1	-7.3909
chr8	113347361	113348095	protein_coding	Sf3b3	exon	ENSMUSG00000033732	ProperStrand	181	chr9	64659390	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	2	-10.8446
chr13	55364715	55364748	protein_coding	Nsd1	exon	ENSMUSG00000021488	ProperStrand	186	chr14	33005075	33005139	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-1.9989
chr15	77592312	77592392	protein_coding	Myh9	utr3	ENSMUSG00000022443	ProperStrand	570	chr14	41775721	41775811	protein_coding	Tspan14	intron	ENSMUSG00000037824	ProperStrand	31	1	-10.1389
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr6	114260511	114260527	protein_coding	Slc6a1	exon	ENSMUSG00000030310	NonProperStrand	147	1	-7.1184
chr9	65578947	65642467	protein_coding	Zfp609	exon	ENSMUSG00000040524	ProperStrand	87	chr7	117190023	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.6703
chr8	13159389	13159405	protein_coding	Lamp1	exon	ENSMUSG00000031447	ProperStrand	92	chr1	74827444	74827464	protein_coding	Wnt6	intron	ENSMUSG00000033227	ProperStrand	16	1	-15.1497
chr15	84123223	84123323	protein_coding	Parvb	exon	ENSMUSG00000022438	ProperStrand	127	chr1	63225257	63225322	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	1	-7.3403
mmu-miR-6240	2	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	NonProperStrand	8	chr3	123210930	123210985	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	NonProperStrand	45	1	-17.8233
chr4	43505783	43505873	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr4	134794846	134828433	protein_coding	Clic4	exon	ENSMUSG00000037242	ProperStrand	84	1	-2.4809
chr11	6520320	6520443	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	chr10	90581059	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	4	-2.6065
chr17	28454397	28454477	protein_coding	Fance	utr5	ENSMUSG00000007570	ProperStrand	23	chr2	130101996	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-7.2605
chrX	39629535	39629598	protein_coding	Stag2	utr3	ENSMUSG00000025862	ProperStrand	10	chr3	123210854	123210892	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.4047
chr2	158185615	158185651	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr1	88252836	88252879	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-0.7371
chr4	73897905	73908727	protein_coding	Kdm4c	utr5	ENSMUSG00000028397	ProperStrand	36	chr4	131865856	131865933	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-4.6017
chr3	55987231	55987247	protein_coding	Nbea	utr5	ENSMUSG00000027799	NonProperStrand	115	chr2	32818815	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-4.2191
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr17	65605907	65605924	protein_coding	Tmem232	exon	ENSMUSG00000045036	ProperStrand	8	1	-12.8500
chr17	34165950	34165983	protein_coding	Slc39a7	exon	ENSMUSG00000024327	ProperStrand	39	chr16	23110828	23110872	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.7347
chr1	145971868	145971889	LINE	L2	L2	chr1L2145971861	NonProperStrand	49	chr5	74489543	74489586	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	1	-6.0200
chr5	116009824	116012563	protein_coding	Rplp0	utr5	ENSMUSG00000067274	ProperStrand	291	chr16	23111694	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	7	-3.9416
chr9	119247824	119248762	protein_coding	Myd88	exon	ENSMUSG00000032508	ProperStrand	14	chr11	106362304	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	2	-14.0255
chr7	133941248	133942616	protein_coding	Aldoa	utr5	ENSMUSG00000030695	NonProperStrand	7	chr11	106362336	106362362	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	NonProperStrand	6	2	-19.5001
chr7	20282083	20282148	protein_coding	Apoe	exon	ENSMUSG00000002985	ProperStrand	231	chr2	26493395	26493485	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-1.4622
chr5	138542545	138542645	protein_coding	Zkscan1	exon	ENSMUSG00000029729	ProperStrand	5	chr4	131908689	131908719	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.7672
chr11	6519809	6519940	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	chr14	76247709	76247794	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	12	-11.9539
chr7	148599369	148599469	protein_coding	Pddc1	intron	ENSMUSG00000051007	ProperStrand	10	chr7	116664872	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-5.9693
chr15	58664489	58664569	LTR	RLTR18	ERVK	chr15RLTR1858664289	ProperStrand	1	chr15	57967341	57967431	LTR	RLTR19-int	ERVK	chr15RLTR19-int57967208	ProperStrand	1	1	-inf
chr7	20438695	20438746	protein_coding	Ceacam16	intron	ENSMUSG00000014686	ProperStrand	2	chr6	122273802	122273822	protein_coding	Phc1	exon	ENSMUSG00000040669	ProperStrand	158	2	-inf
chr1	153759644	153759664	protein_coding	1700025G04Rik	intron	ENSMUSG00000032666	NonProperStrand	35	chr15	34370561	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-4.5674
chr2	154704288	154710124	protein_coding	Eif2s2	exon	ENSMUSG00000074656	ProperStrand	96	chr4	131865391	131865471	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-3.1365
chr7	52337303	52337393	SINE	B1_Mus1	Alu	chr7B1_Mus152337269	ProperStrand	1	chr7	52337478	52337568	SINE	B1_Mus1	Alu	chr7B1_Mus152337427	ProperStrand	1	1	-inf
chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	chr7	112958502	112958522	protein_coding	Mrpl17	exon	ENSMUSG00000030879	ProperStrand	9	1	-13.1626
chr4	138904748	138904781	protein_coding-noncoding	Mrto4	utr3	ENSMUSG00000028741	ProperStrand	4	chr4	138904638	138904747	protein_coding	Mrto4	intron	ENSMUSG00000028741	ProperStrand	40	4	-inf
chr17	47928467	47928485	protein_coding	Tfeb	exon	ENSMUSG00000023990	ProperStrand	78	chr7	86244450	86244468	protein_coding	Acan	exon	ENSMUSG00000030607	ProperStrand	38	1	-13.7096
chr12	111932536	111932836	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr12	106269345	106269435	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	2	-0.8462
chr18	80470654	80470683	protein_coding-noncoding	Pqlc1	utr5	ENSMUSG00000034006	ProperStrand	2	chr1	24621336	24621378	protein_coding	Gm10925	utr3	ENSMUSG00000090378	ProperStrand	320	2	-inf
chr4	131908810	131908911	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr3	85942714	85942730	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	4	-12.3487
chr8	69405678	69405772	protein_coding	Naf1	intron	ENSMUSG00000014907	ProperStrand	104	chr10	23505559	23505618	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-6.4589
chr5	115956842	115956858	protein_coding	Pxn	utr5	ENSMUSG00000029528	ProperStrand	171	chr9	120038552	120038576	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.3396
chr8	72287172	72287188	protein_coding	Zfp866	utr3	ENSMUSG00000043090	NonProperStrand	134	chr15	88977274	88977290	protein_coding	Mapk11	intron	ENSMUSG00000053137	NonProperStrand	29	1	-13.1729
chr11	86443902	86443947	protein_coding	Vmp1	intron	ENSMUSG00000018171	ProperStrand	6	chr18	35102298	35102322	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-11.3280
mmu-miR-6238	2	20	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr9	120038002	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-2.1961
chr9	61762182	61762239	protein_coding	Rplp1	utr5	ENSMUSG00000007892	ProperStrand	116	chr9	56775853	56775870	protein_coding	Snx33	utr5	ENSMUSG00000032733	NonProperStrand	116	1	-10.6654
chr13	53285957	53285978	protein_coding	Ror2	intron	ENSMUSG00000021464	ProperStrand	46	chr12	106269284	106269335	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-4.6475
chr11	116847174	116847191	protein_coding	Mgat5b	utr3	ENSMUSG00000043857	NonProperStrand	15	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-10.5494
chr17	88077661	88077677	protein_coding	Msh2	exon	ENSMUSG00000024151	ProperStrand	124	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-5.7703
chr7	52381720	52381784	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	chr3	88497879	88497979	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	8	-17.6174
chr12	84443113	84443130	protein_coding	Dpf3	intron	ENSMUSG00000021221	NonProperStrand	4	chr5	121655017	121655126	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-9.2889
chr10	122002974	122003064	LINE	L1Md_F2	L1	chr10L1Md_F2122002095	NonProperStrand	23	chr12	59964699	59964779	LINE	L1Md_F2	L1	chr12L1Md_F259964718	NonProperStrand	1	1	-inf
chr17	23957718	23957808	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	chr9	15118324	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	NonProperStrand	11	2	-22.2691
chr14	68790503	68790520	LINE	Lx6	L1	chr14Lx668790437	NonProperStrand	1	chr5	112865458	112865476	protein_coding	Sez6l	exon	ENSMUSG00000058153	ProperStrand	81	1	-inf
chr12	82817487	82817504	protein_coding	Map3k9	utr3	ENSMUSG00000042724	NonProperStrand	8	chr14	31827477	31827510	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-11.0652
chr10	80350238	80350254	protein_coding	Tmprss9	exon	ENSMUSG00000059406	NonProperStrand	1	chr8	73419703	73419774	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-inf
mmu-miR-2137	0	19	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	chr7	87536172	87536399	protein_coding	Furin	exon	ENSMUSG00000030530	ProperStrand	22	1	-13.5886
chr5	76051509	76052170	protein_coding	Kit	utr3	ENSMUSG00000005672	ProperStrand	58	chr16	23110472	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-4.4433
chr15	77592342	77592420	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr2	26768368	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-1.5690
chr9	113562325	113562341	protein_coding	Pdcd6ip	utr3	ENSMUSG00000032504	ProperStrand	53	chr17	47684132	47684149	protein_coding	Ccnd3	intron	ENSMUSG00000034165	NonProperStrand	17	1	-16.1123
chr3	137849424	137849440	protein_coding	4930579F01Rik	utr5	ENSMUSG00000012042	NonProperStrand	156	chr11	102294588	102294607	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	1	-6.9900
chr12	114147224	114147324	protein_coding	Jag2	exon	ENSMUSG00000002799	ProperStrand	28	chr16	23110960	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.1386
chr2	130459993	130460093	protein_coding	Prosapip1	utr3	ENSMUSG00000037703	ProperStrand	11	chr7	150717298	150717374	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-8.9274
chr12	17552949	17553087	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr1	162967489	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	18	-1.0049
chr8	85784841	85784858	protein_coding	Tbc1d9	exon	ENSMUSG00000031709	ProperStrand	66	chr3	123210854	123210961	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.9131
chr4	43983427	43990412	protein_coding	Glipr2	exon	ENSMUSG00000028480	ProperStrand	10	chr10	23505152	23505220	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-7.3782
chr11	76025201	76025230	protein_coding	Glod4	utr3	ENSMUSG00000017286	ProperStrand	23	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-8.8513
chr19	52152048	52152067	LINE	Lx	L1	chr19Lx52151005	ProperStrand	2	chr1	124669054	124669153	LINE	L1Md_A	L1	chr1L1Md_A124662720	ProperStrand	2	2	-inf
chr7	56094817	56094833	protein_coding	Csrp3	exon	ENSMUSG00000030470	ProperStrand	2	chr4	131908752	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-8.0336
chr10	61164809	61164837	protein_coding	Tysnd1	exon	ENSMUSG00000020087	ProperStrand	54	chr9	120037933	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-4.9091
chrX	83437137	83437153	protein_coding	Nr0b1	utr5	ENSMUSG00000025056	ProperStrand	37	chr1	174492230	174492246	protein_coding	Vsig8	exon	ENSMUSG00000049598	ProperStrand	27	1	-15.9045
chr4	154964530	154964547	protein_coding	Nadk	utr3	ENSMUSG00000029063	ProperStrand	25	chr4	131908236	131908298	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.8464
chr1	78459475	78459517	protein_coding	Farsb	exon	ENSMUSG00000026245	ProperStrand	40	chr2	153050783	153050799	protein_coding	Tspyl3	exon	ENSMUSG00000074671	ProperStrand	228	1	-11.4545
chr1	89681254	89681354	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	chr5	125884617	125884654	tRNA	tRNA1317-AlaTGC	.	676829	ProperStrand	149	1	-3.7061
chr11	84721747	84721799	protein_coding	Myo19	exon	ENSMUSG00000020527	ProperStrand	82	chr5	89663839	89663855	protein_coding	Slc4a4	exon	ENSMUSG00000060961	NonProperStrand	195	1	-10.3213
chr11	115506625	115506666	protein_coding	Grb2	utr3	ENSMUSG00000059923	ProperStrand	12	chr11	97642952	97643059	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-5.5085
chr13	63413494	63413511	protein_coding	2010111I01Rik	intron	ENSMUSG00000021458	ProperStrand	32	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-10.1937
chr4	131908231	131908269	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr10	127522580	127522627	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	1	-2.8299
chr4	116827016	116827687	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	chr4	131908236	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-0.9369
chr5	74489543	74489563	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr1	133252344	133252394	protein_coding	Srgap2	intron	ENSMUSG00000026425	ProperStrand	299	1	-2.6254
chr2	20441251	20441270	protein_coding	Etl4	utr5	ENSMUSG00000036617	ProperStrand	86	chr9	40612830	40612920	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	1	-8.8221
chr18	10814496	10814536	protein_coding	Mib1	utr3	ENSMUSG00000024294	ProperStrand	27	chr18	35716845	35716883	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.5820
chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	chr2	130103751	130103804	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-4.4500
chr10	126197157	126197246	LINE	L1Md_T	L1	chr10L1Md_T126197175	ProperStrand	1	chr1	79603780	79603860	protein_coding	Ap1s3	utr3	ENSMUSG00000054702	NonProperStrand	11	1	-inf
chr9	48707950	48707967	protein_coding	Htr3a	exon	ENSMUSG00000032269	NonProperStrand	20	chr9	120039545	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-5.4196
chr7	25673970	25674773	protein_coding	Rps19	exon	ENSMUSG00000040952	ProperStrand	101	chr7	29136532	29136622	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.5377
chr11	100414998	100415014	protein_coding	Ttc25	exon	ENSMUSG00000006784	NonProperStrand	119	chr1	93263065	93263081	protein_coding	Fam132b	exon	ENSMUSG00000047443	NonProperStrand	98	1	-10.9523
chr12	70259678	70260004	protein_coding	Rps29	exon	ENSMUSG00000034892	ProperStrand	124	chr19	8798740	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-3.4349
chr15	79260247	79260520	protein_coding	Csnk1e	exon	ENSMUSG00000022433	ProperStrand	59	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	1	-7.0610
chr10	127958267	127958367	protein_coding	Esyt1	intron	ENSMUSG00000025366	ProperStrand	31	chr3	123210854	123210877	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.2114
chr7	133433405	133433495	protein_coding	Sbk1	exon	ENSMUSG00000042978	ProperStrand	24	chr11	69481366	69481434	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-4.9335
chr2	121176333	121176349	protein_coding	Ppip5k1	exon	ENSMUSG00000033526	ProperStrand	85	chr1	33833454	33833470	protein_coding	Zfp451	exon	ENSMUSG00000042197	NonProperStrand	393	1	-8.8506
chr4	74843493	74843509	LINE	Lx9	L1	chr4Lx974843264	NonProperStrand	30	chrX	49966867	49966892	protein_coding	Gpc3	exon	ENSMUSG00000055653	ProperStrand	43	1	-15.3999
chr4	43505656	43505681	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr11	105118231	105121594	protein_coding	Tlk2	exon	ENSMUSG00000020694	ProperStrand	19	1	-5.2538
chr5	108332839	108332860	protein_coding	Rpl5	exon	ENSMUSG00000058558	ProperStrand	235	chr2	26493365	26493473	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-2.7019
chr1	193543378	193543425	protein_coding	Lpgat1	exon	ENSMUSG00000026623	ProperStrand	31	chr5	73797640	73799390	protein_coding	Cwh43	exon	ENSMUSG00000029154	NonProperStrand	3	1	-inf
chr12	60141404	60141494	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	chr13	51743581	51743662	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-1.0765
chr2	90235315	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr14	50144888	50144905	protein_coding	Slc35f4	intron	ENSMUSG00000021852	ProperStrand	11	1	-7.8469
chr14	79309372	79309391	protein_coding	1300010F03Rik	intron	ENSMUSG00000058997	ProperStrand	29	chr13	76341035	76341055	protein_coding	Fam81b	intron	ENSMUSG00000078966	NonProperStrand	220	1	-12.1785
chr10	41644311	41644329	protein_coding	Armc2	exon	ENSMUSG00000071324	ProperStrand	281	chr11	6520382	6520442	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	1	-4.6901
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr14	33137603	33137688	protein_coding	Ogdhl	intron	ENSMUSG00000021913	ProperStrand	182	1	-6.1155
chr12	63334213	63334230	LTR	RLTR9E	ERVK	chr12RLTR9E63333890	NonProperStrand	15	chr17	45710137	45710162	protein_coding	Hsp90ab1	utr5	ENSMUSG00000023944	ProperStrand	1627	1	-9.5299
chr1	90162028	90162098	protein_coding	Hjurp	exon	ENSMUSG00000044783	ProperStrand	110	chr4	122968601	122968691	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-5.0956
chr3	157204072	157204671	protein_coding	Zranb2	exon	ENSMUSG00000028180	ProperStrand	43	chr8	13416897	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-7.1164
chr1	99624059	99625544	protein_coding	Ppip5k2	exon	ENSMUSG00000040648	ProperStrand	35	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	5	-18.4425
chr13	86184626	86184652	snoRNA	ENSMUSG00000064917_snoZ39	.	ENSMUSG00000064917	ProperStrand	15	chr11	55296213	55296333	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-8.9717
chr4	101137733	101137813	protein_coding	Ak4	utr3	ENSMUSG00000028527	ProperStrand	20	chr13	96100605	96100695	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	1	-10.2885
chr12	34851090	34851108	protein_coding	Hdac9	intron	ENSMUSG00000004698	ProperStrand	41	chr7	108440949	108440967	protein_coding	Atg16l2	intron	ENSMUSG00000047767	ProperStrand	121	1	-12.6738
chr15	84138440	84138517	protein_coding	Parvb	intron	ENSMUSG00000022438	ProperStrand	127	chr11	69481332	69481422	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-1.9196
chr6	90990892	90992336	protein_coding	Nup210	exon	ENSMUSG00000030091	ProperStrand	140	chr18	35716813	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-0.9381
chr17	15054843	15055108	protein_coding	Wdr27	exon	ENSMUSG00000046991	NonProperStrand	4	chr7	29136525	29136576	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-7.7378
chr5	74489201	74489622	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	2	-0.7470
chr19	5272621	5272637	protein_coding	Pacs1	exon	ENSMUSG00000024855	ProperStrand	24	chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-9.7080
chr9	31019330	31019347	protein_coding	Aplp2	utr5	ENSMUSG00000031996	ProperStrand	172	chr19	8963031	8963115	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-0.7729
chr1	134212897	134212914	protein_coding	Nuak2	exon	ENSMUSG00000009772	NonProperStrand	19	chr16	73024736	73028010	protein_coding	Robo1	exon	ENSMUSG00000022883	ProperStrand	47	1	-16.1994
chr3	138152009	138152026	protein_coding	Metap1	intron	ENSMUSG00000005813	NonProperStrand	2	chr16	91227718	91227735	protein_coding	Olig2	utr3	ENSMUSG00000039830	NonProperStrand	78	1	-21.9144
chr19	8798461	8798551	lincRNA	Snhg1	exon	ENSMUSG00000090867	ProperStrand	100	chr17	39985356	39985425	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-4.9369
chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	chr2	135491831	135491848	protein_coding	Plcb4	intron	ENSMUSG00000039943	ProperStrand	50	1	-11.1302
chr18	60937530	60938088	protein_coding	Rps14	exon	ENSMUSG00000024608	ProperStrand	154	chr6	70794802	70794818	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	1	-9.5312
chr2	72094558	72094574	protein_coding	Rapgef4	utr3	ENSMUSG00000049044	NonProperStrand	11	chr16	23110829	23110919	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.6241
chr11	7067186	7069426	protein_coding	Adcy1	exon	ENSMUSG00000020431	ProperStrand	183	chr1	36853020	36853110	protein_coding	Tmem131	exon	ENSMUSG00000026116	ProperStrand	129	1	-9.5406
chr3	82860753	82862631	protein_coding	Plrg1	exon	ENSMUSG00000027998	ProperStrand	16	chr16	23110968	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.9771
chr7	31252574	31252985	protein_coding	Nphs1	exon	ENSMUSG00000006649	ProperStrand	22	chr16	23111692	23111772	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.6613
chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	chr9	78053733	78053756	protein_coding	Gsta4	exon	ENSMUSG00000032348	ProperStrand	82	1	-7.8799
chr9	30957220	30957310	protein_coding	Aplp2	utr3	ENSMUSG00000031996	ProperStrand	172	chr17	13184995	13185014	protein_coding	Wtap	utr5	ENSMUSG00000060475	ProperStrand	119	1	-9.8258
chr5	29804701	29804718	protein_coding	Mnx1	exon	ENSMUSG00000001566	ProperStrand	6	chr10	23505167	23505232	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-5.3874
chr2	90235286	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	38354919	38354935	protein_coding	Zfp536	exon	ENSMUSG00000043456	NonProperStrand	236	1	-2.0161
chr7	139833256	139834171	protein_coding	Lhpp	exon	ENSMUSG00000030946	ProperStrand	35	chr8	13416897	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-7.5284
chr3	122237427	122237517	LTR	MLT1F1	MaLR	chr3MLT1F1122237406	NonProperStrand	4	chr10	80640589	80640842	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	4	-inf
chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr13	46862891	46862991	snoRNA	ENSMUSG00000064558_SNORA55	.	ENSMUSG00000064558	ProperStrand	187	1	-4.2497
chr13	58493563	58493595	protein_coding	Hnrnpk	utr3	ENSMUSG00000021546	ProperStrand	117	chr8	73419662	73419762	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	5	-9.8550
chr10	75399175	75400136	protein_coding	Chchd10	exon	ENSMUSG00000049422	ProperStrand	140	chr4	41150095	41150127	snoRNA	ENSMUSG00000089265_SNORD121A	.	ENSMUSG00000089265	ProperStrand	370	1	-7.9750
chr2	170497336	170497436	LTR	ORR1E	MaLR	chr2ORR1E170497291	ProperStrand	1	chr18	33954889	33954948	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	NonProperStrand	24	1	-inf
chr5	100396512	100396570	protein_coding	Hnrnpd	intron	ENSMUSG00000000568	ProperStrand	33	chr9	95524996	95525035	snoRNA	ENSMUSG00000065346_SNORA4	.	ENSMUSG00000065346	ProperStrand	142	3	-23.9253
chr7	29797253	29798769	protein_coding	Ryr1	exon	ENSMUSG00000030592	NonProperStrand	9	chr19	27464471	27464500	protein_coding	D19Bwg1357e	utr3	ENSMUSG00000041360	ProperStrand	110	1	-15.9999
chr2	129998672	129998717	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	1	-4.9302
chr17	37115659	37115762	protein_coding	2410137M14Rik	exon	ENSMUSG00000064308	ProperStrand	4	chr9	15118328	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-8.9841
chr11	79870027	79870048	protein_coding	Crlf3	exon	ENSMUSG00000017561	NonProperStrand	2	chr10	110918542	110918642	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	NonProperStrand	10	1	-inf
chr3	156224612	156224628	lincRNA	4930570G19Rik	exon	ENSMUSG00000085084	ProperStrand	326	chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	1	-5.5547
chr11	72312885	72312954	protein_coding	Spns3	exon	ENSMUSG00000020798	ProperStrand	2	chr4	131908809	131908896	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-inf
chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr15	53502170	53502187	protein_coding	Samd12	intron	ENSMUSG00000058656	ProperStrand	7	1	-10.8546
chr6	65002787	65006442	protein_coding	Smarcad1	exon	ENSMUSG00000029920	ProperStrand	4	chr8	44380918	44381008	protein_coding	Zfp42	utr3	ENSMUSG00000051176	ProperStrand	127	1	-17.5987
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr7	116664806	116664924	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	8	-1.1697
chr14	124353869	124353886	protein_coding	Itgbl1	exon	ENSMUSG00000032925	ProperStrand	159	chr4	130305549	130305619	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	1	-7.9611
chr12	88302895	88302936	protein_coding	2310044G17Rik	exon	ENSMUSG00000034157	ProperStrand	48	chr17	35087894	35087935	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	2	-9.2165
chr2	34628786	34628823	protein_coding	Hspa5	exon	ENSMUSG00000026864	ProperStrand	181	chr9	44169559	44169587	protein_coding	Vps11	exon	ENSMUSG00000032127	ProperStrand	19	1	-13.4343
chr11	117582795	117582885	protein_coding	Tnrc6c	exon	ENSMUSG00000025571	ProperStrand	51	chr5	130300425	130300505	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.7919
chr1	64079615	64079715	protein_coding	Klf7	utr3	ENSMUSG00000025959	ProperStrand	9	chr2	130101257	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-10.4559
chr3	96962915	96962986	protein_coding	Acp6	utr5	ENSMUSG00000028093	ProperStrand	19	chr5	108336378	108336468	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-7.1594
chr7	117166756	117166858	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	chr14	31827475	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	7	-3.9986
chr11	5695557	5700110	protein_coding	Dbnl	exon	ENSMUSG00000020476	ProperStrand	16	chr18	35716790	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-11.1526
chr12	107067273	107067331	protein_coding	Papola	exon	ENSMUSG00000021111	ProperStrand	67	chr7	150717328	150717418	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	8	-19.1201
chr5	56802342	56802432	LINE	L1_Mur3	L1	chr5L1_Mur356802240	ProperStrand	1	chr5	50574572	50574652	LINE	Lx8	L1	chr5Lx850574240	ProperStrand	1	1	-inf
chr7	20341575	20341644	protein_coding	Bcam	utr3	ENSMUSG00000002980	ProperStrand	43	chr9	15118348	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	4	-13.2948
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr8	41409936	41409954	protein_coding	Efha2	intron	ENSMUSG00000039478	ProperStrand	5	1	-15.5679
chr3	86028641	86028658	protein_coding	Lrba	utr5	ENSMUSG00000028080	ProperStrand	39	chr19	8963024	8963083	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.0232
chr4	131908687	131908798	lincRNA	Gm17300	intron	ENSMUSG00000091021	ProperStrand	109	chr5	151755615	151755632	protein_coding	Kl	exon	ENSMUSG00000058488	NonProperStrand	14	1	-15.0809
chr9	21807724	21817298	protein_coding	Prkcsh	intron	ENSMUSG00000003402	ProperStrand	58	chr16	23110828	23110947	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-0.8495
chr8	125099336	125099411	protein_coding	Aprt	exon	ENSMUSG00000006589	ProperStrand	20	chr11	69483137	69483227	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-7.4933
chr11	120490895	120490930	protein_coding	Mafg	exon	ENSMUSG00000051510	ProperStrand	23	chr4	41150095	41150131	snoRNA	ENSMUSG00000089265_SNORD121A	.	ENSMUSG00000089265	ProperStrand	370	1	-11.6093
chrX	71717545	71717635	LTR	ORR1A0-int	MaLR	chrXORR1A0-int71716374	NonProperStrand	1	chrX	48855809	48855889	protein_coding	Hs6st2	intron	ENSMUSG00000062184	NonProperStrand	2	1	-inf
chr4	131908798	131908898	lincRNA	Gm17300	exon	ENSMUSG00000091021	ProperStrand	109	chr17	5347022	5347040	protein_coding	Arid1b	utr3	ENSMUSG00000069729	ProperStrand	28	2	-18.8956
chr5	73474366	73474456	protein_coding	Fryl	exon	ENSMUSG00000070733	ProperStrand	173	chr11	68886963	68887033	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-2.2475
chr10	34002680	34002698	protein_coding	Tspyl1	exon	ENSMUSG00000047514	ProperStrand	22	chr8	59991376	59991430	protein_coding	Hmgb2	utr5	ENSMUSG00000054717	ProperStrand	184	1	-13.1001
chr8	77554729	77554761	protein_coding	Hmgxb4	utr3	ENSMUSG00000034518	ProperStrand	25	chrX	152009278	152009294	protein_coding	Ptchd1	exon	ENSMUSG00000041552	NonProperStrand	294	1	-11.8994
chr8	72250905	72250945	LTR	MurERV4_19-int	ERVK	chr8MurERV4_19-int72250674	NonProperStrand	1	chr1	16635861	16635897	protein_coding	Tceb1	exon	ENSMUSG00000079658	ProperStrand	6	1	-inf
chr17	23960766	23960782	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	chr7	150717366	150717425	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-3.7564
chr7	53068737	53068780	protein_coding	Cyth2	utr5	ENSMUSG00000003269	ProperStrand	15	chr16	23111440	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.5828
chr7	56859842	56859921	protein_coding	Nav2	utr3	ENSMUSG00000052512	ProperStrand	106	chr7	152118581	152118597	protein_coding	Ccnd1	exon	ENSMUSG00000070348	ProperStrand	93	1	-11.2895
chr18	33361488	33361511	protein_coding	Stard4	utr3	ENSMUSG00000024378	ProperStrand	21	chr5	130300460	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.4412
chr19	47125061	47125078	protein_coding	Pcgf6	exon	ENSMUSG00000025050	ProperStrand	14	chr16	23110940	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.2008
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr7	135842910	135845761	protein_coding	Mcmbp	exon	ENSMUSG00000048170	ProperStrand	87	1	-7.9729
chr11	94491416	94493407	protein_coding	Lrrc59	exon	ENSMUSG00000020869	ProperStrand	115	chr4	131866208	131866292	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-2.5024
chr4	86500648	86500738	protein_coding	Rps6	exon	ENSMUSG00000028495	ProperStrand	263	chr1	89681146	89681226	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-2.6860
chr6	88053871	88053888	protein_coding	Rpn1	utr3	ENSMUSG00000030062	ProperStrand	58	chr5	108334201	108334343	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-4.8854
chr4	147452904	147452939	protein_coding	Agtrap	utr3	ENSMUSG00000029007	ProperStrand	18	chr2	26494708	26494809	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	4	-16.8646
chr7	133253474	133253542	protein_coding	Xpo6	exon	ENSMUSG00000000131	ProperStrand	36	chr10	40924164	40924254	protein_coding	Fig4	intron	ENSMUSG00000038417	ProperStrand	18	1	-16.7641
chr8	15218777	15218798	SINE	B4A	B4	chr8B4A15218663	ProperStrand	1	chr11	51551280	51551336	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	1	-inf
chr9	123738285	123738385	protein_coding	Fyco1	exon	ENSMUSG00000025241	ProperStrand	31	chr9	110124803	110124874	protein_coding	Smarcc1	intron	ENSMUSG00000032481	ProperStrand	108	1	-13.4678
chrX	166428135	166428225	protein_coding	Mid1	utr3	ENSMUSG00000035299	ProperStrand	209	chr16	23111697	23111777	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-0.8559
chr15	99548653	99548669	protein_coding	Gpd1	exon	ENSMUSG00000023019	ProperStrand	40	chr16	23110842	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.7072
chr2	38442239	38442260	protein_coding	Nek6	utr3	ENSMUSG00000026749	NonProperStrand	1	chr17	39985561	39985661	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-inf
chr14	49281095	49281113	protein_coding	Otx2	exon	ENSMUSG00000021848	ProperStrand	19	chr11	55296231	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-8.4870
chr11	55296235	55296334	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	chr15	79908930	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	17	-17.4982
chr14	31338452	31338469	protein_coding	Dcp1a	utr3	ENSMUSG00000021962	NonProperStrand	4	chr1	138178661	138178677	protein_coding	Camsap2	exon	ENSMUSG00000041570	NonProperStrand	116	1	-17.5656
chr4	130305551	130305620	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	chr14	52829460	52829560	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	2	-8.0183
chr4	86232353	86232378	protein_coding	Haus6	intron	ENSMUSG00000038047	NonProperStrand	2	chr19	8963052	8963152	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-17.8653
chr5	115939537	115939612	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr2	158185576	158185666	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-1.5367
chr2	167477700	167477718	protein_coding	Gm20431	intron	ENSMUSG00000089739	ProperStrand	81	chr19	8798740	8798813	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	6	-21.1839
chr2	150097938	150097981	LINE	Lx2B	L1	chr2Lx2B150097559	ProperStrand	2	chr16	23110454	23110529	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-inf
chr2	84210564	84210581	protein_coding	Calcrl	exon	ENSMUSG00000059588	ProperStrand	25	chr16	23110827	23110875	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.2939
chr10	75864158	75864175	protein_coding	Pcnt	exon	ENSMUSG00000001151	ProperStrand	127	chr5	108334195	108334266	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-3.4092
chr12	88639594	88639611	protein_coding	Ism2	intron	ENSMUSG00000050671	ProperStrand	12	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-6.4045
chr2	31340297	31340397	protein_coding	Ass1	intron	ENSMUSG00000076441	ProperStrand	29	chr11	77994803	77994846	snoRNA	ENSMUSG00000064540_Snord42a	.	ENSMUSG00000064540	ProperStrand	142	1	-13.0567
chr4	43505656	43505887	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr9	78326465	78328437	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	13	-1.3745
chr5	122691914	122691930	protein_coding	Hvcn1	utr3	ENSMUSG00000064267	ProperStrand	182	chr16	23110465	23110496	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-0.8348
chr7	147218109	147219560	protein_coding	Tubgcp2	exon	ENSMUSG00000025474	ProperStrand	10	chr5	130300514	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	4	-18.6449
chr18	60937530	60938088	protein_coding	Rps14	exon	ENSMUSG00000024608	ProperStrand	154	chr10	70840033	70840051	protein_coding	Ipmk	utr3	ENSMUSG00000060733	ProperStrand	22	1	-13.4555
chr11	106003840	106007067	protein_coding	Map3k3	exon	ENSMUSG00000020700	ProperStrand	36	chr15	57703313	57703377	protein_coding	Derl1	utr3	ENSMUSG00000022365	ProperStrand	7	1	-18.6891
chr17	45706154	45706190	protein_coding-noncoding	Hsp90ab1	utr3	ENSMUSG00000023944	ProperStrand	1	chr2	25838424	25838440	protein_coding	Camsap1	exon	ENSMUSG00000026933	NonProperStrand	3	1	-inf
chr18	35744528	35747377	protein_coding	Matr3	exon	ENSMUSG00000037236	ProperStrand	90	chr1	145626118	145626187	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-8.0182
chr14	57312848	57312972	protein_coding	Mphosph8	intron	ENSMUSG00000079184	NonProperStrand	27	chr1	162965532	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-7.9509
chr17	24615989	24616006	protein_coding	Mlst8	utr5	ENSMUSG00000024142	NonProperStrand	40	chr3	88715213	88715230	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-8.0450
chr13	8987078	8987122	protein_coding	Gtpbp4	exon	ENSMUSG00000021149	ProperStrand	26	chr9	15119716	15119969	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-10.1749
chr10	67008372	67008388	protein_coding	Ado	utr3	ENSMUSG00000057134	ProperStrand	7	chr8	13876173	13876225	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-11.5542
chr4	98026708	98026808	protein_coding	Tm2d1	intron	ENSMUSG00000028563	ProperStrand	1	chr7	29136575	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-inf
chr15	77790494	77790519	protein_coding	Eif3d	exon	ENSMUSG00000016554	ProperStrand	69	chr2	32818803	32818936	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-5.1984
chr19	30217931	30249737	protein_coding	Gldc	exon	ENSMUSG00000024827	ProperStrand	175	chr11	6428071	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-4.2073
chr11	58889819	58889836	protein_coding	Obscn	exon	ENSMUSG00000061462	ProperStrand	81	chr16	23111383	23111467	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.8748
chr1	193655299	193655399	protein_coding	Nek2	utr3	ENSMUSG00000026622	ProperStrand	12	chr7	118219575	118219627	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-7.3600
chr11	120439563	120440403	protein_coding	Arhgdia	utr3	ENSMUSG00000025132	ProperStrand	39	chr11	69481332	69481433	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-6.7372
chr11	116938585	116938685	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	chr11	68853923	68853959	tRNA	tRNA396-ProCGG	.	1124021	ProperStrand	48	1	-6.6008
chr7	73967628	73967644	protein_coding	Lass3	utr3	ENSMUSG00000030510	NonProperStrand	6	chr1	162968489	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-10.8078
chr4	131908690	131908808	lincRNA	Gm17300	intron	ENSMUSG00000091021	ProperStrand	109	chr16	23110976	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	NonProperStrand	93	1	-11.2333
chr5	115538891	115538981	protein_coding	Sppl3	exon	ENSMUSG00000029550	ProperStrand	33	chr11	97642967	97643079	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-6.0430
chr11	50719186	50719601	protein_coding	Zfp2	utr5	ENSMUSG00000049321	NonProperStrand	3	chr19	8963086	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-14.1237
chr7	4691730	4691754	protein_coding	Suv420h2	utr5	ENSMUSG00000059851	NonProperStrand	70	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	8	-6.1020
chr11	57866208	57869024	protein_coding	Larp1	exon	ENSMUSG00000037331	ProperStrand	201	chr11	97642991	97643080	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-0.7306
chr1	152268927	152269668	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	chr9	45726866	45726944	protein_coding	Pcsk7	exon	ENSMUSG00000035382	ProperStrand	8	1	-13.0433
chr14	55059442	55059546	protein_coding	Mmp14	utr3	ENSMUSG00000000957	ProperStrand	61	chr16	23110968	23110984	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-4.3952
chr9	83673565	83673582	protein_coding	Elovl4	utr3	ENSMUSG00000032262	ProperStrand	159	chr11	106362639	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-5.4837
chr4	47297380	47299913	protein_coding	Col15a1	exon	ENSMUSG00000028339	ProperStrand	17	chr7	30812450	30812507	protein_coding	Zfp568	utr3	ENSMUSG00000074221	ProperStrand	110	1	-14.6652
chr6	134666115	134666215	protein_coding	Dusp16	utr3	ENSMUSG00000030203	ProperStrand	27	chr2	166890788	166890858	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	1	-11.9960
chr17	34252080	34252135	protein_coding	Brd2	exon	ENSMUSG00000024335	ProperStrand	69	chr18	35716810	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.9428
chr7	26057526	26057543	protein_coding	Cic	exon	ENSMUSG00000005442	ProperStrand	80	chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	1	-8.0178
chr11	100445901	100457482	protein_coding	Dnajc7	exon	ENSMUSG00000014195	ProperStrand	49	chr3	123210854	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	8	-21.3371
chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	chr15	98350206	98350285	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	2	-2.7978
chrX	84483698	84483718	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr17	24665413	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-0.7576
mmu-miR-6240	3	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chrX	56358179	56358196	protein_coding	Fgf13	intron	ENSMUSG00000031137	ProperStrand	39	1	-6.7566
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr7	134168079	134168396	protein_coding	Maz	exon	ENSMUSG00000030678	ProperStrand	42	1	-5.6503
chr9	120037928	120038027	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	chr3	88497863	88497944	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	2	-0.7001
chr13	104541009	104541032	protein_coding	Srek1	intron	ENSMUSG00000032621	ProperStrand	41	chr5	64136431	64136448	protein_coding	3110047P20Rik	utr5	ENSMUSG00000090061	ProperStrand	16	1	-16.8577
chr7	134928557	134928637	protein_coding	Setd1a	exon	ENSMUSG00000042308	ProperStrand	58	chr2	26494708	26494798	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.1681
chr9	62222493	62225121	protein_coding	Anp32a	exon	ENSMUSG00000032249	ProperStrand	75	chr9	15119305	15119395	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-4.6780
chr5	108333793	108333893	protein_coding	Rpl5	exon	ENSMUSG00000058558	ProperStrand	235	chr1	162968447	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-3.4698
chr7	28453235	28453281	protein_coding-noncoding	Map3k10	utr3	ENSMUSG00000040390	ProperStrand	2	chr9	15119702	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-inf
chr4	129165047	129165120	protein_coding	Bsdc1	utr3	ENSMUSG00000040859	ProperStrand	14	chr6	131330321	131330411	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	ProperStrand	408	1	-12.4350
chr3	145142817	145142833	protein_coding	Col24a1	exon	ENSMUSG00000028197	ProperStrand	33	chr16	23110454	23110476	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.5297
chr12	81537459	81537475	protein_coding	Dcaf5	utr5	ENSMUSG00000049106	ProperStrand	23	chr19	8799024	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-7.7455
chr5	62433217	62433235	LINE	Lx	L1	chr5Lx62432932	ProperStrand	1	chr9	15119666	15119708	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-inf
chr16	95014304	95014322	protein_coding	Kcnj6	intron	ENSMUSG00000043301	ProperStrand	15	chr17	84586038	84586079	protein_coding	Zfp36l2	exon	ENSMUSG00000045817	ProperStrand	16	1	-19.4575
chr19	37483111	37483164	protein_coding	Kif11	intron	ENSMUSG00000012443	ProperStrand	29	chr11	6428034	6428076	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-10.9658
chr3	87717189	87719506	protein_coding	Hdgf	utr3	ENSMUSG00000004897	ProperStrand	117	chr9	15119629	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-4.4950
chr6	114812184	114812264	protein_coding	Vgll4	exon	ENSMUSG00000030315	NonProperStrand	5	chr18	33954816	33954906	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	NonProperStrand	24	1	-18.9154
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr15	73416617	73416633	protein_coding	Slc45a4	exon	ENSMUSG00000079020	ProperStrand	127	1	-7.0989
chr8	3642156	3642172	protein_coding	Stxbp2	intron	ENSMUSG00000004626	NonProperStrand	73	chr15	5068407	5068429	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-5.6818
chr10	110918636	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	chr17	23685733	23685763	tRNA	tRNA995-ArgCCT	.	316373	ProperStrand	18	1	-5.7690
chr4	44043300	44043408	protein_coding	Clta	intron	ENSMUSG00000028478	ProperStrand	59	chr9	63848425	63848442	protein_coding	Smad6	intron	ENSMUSG00000036867	NonProperStrand	637	6	-19.4726
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr9	45198928	45199653	protein_coding	Fxyd6	exon	ENSMUSG00000066705	NonProperStrand	108	1	-10.1898
chr3	144256629	144256688	protein_coding	Sep15	intron	ENSMUSG00000037072	ProperStrand	19	chr4	131908356	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-5.7801
chr14	87659491	87659512	LTR	MTEa	MaLR	chr14MTEa87659331	NonProperStrand	83	chr8	73180352	73180383	protein_coding	Pgpep1	intron	ENSMUSG00000056204	ProperStrand	12	1	-15.9280
chr8	127212850	127214208	protein_coding	Ttc13	exon	ENSMUSG00000037300	ProperStrand	20	chr16	23111452	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-5.3125
chr11	69480995	69481024	protein_coding	Eif4a1	exon	ENSMUSG00000059796	ProperStrand	108	chr11	97643000	97643090	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-4.4569
chr1	162965508	162965598	non_coding	Gas5	.	ENSMUSG00000053332	ProperStrand	144	chr11	97642952	97643026	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	7	-10.5934
chr7	123236643	123236660	lincRNA	1700003G18Rik	exon	ENSMUSG00000087621	ProperStrand	2	chr11	116704533	116704549	protein_coding	Jmjd6	utr5	ENSMUSG00000056962	ProperStrand	92	1	-inf
chr4	68423440	68423456	protein_coding	Dbc1	exon	ENSMUSG00000028351	ProperStrand	78	chr6	145564547	145564563	protein_coding	Tuba3b	utr5	ENSMUSG00000067338	ProperStrand	152	1	-10.9203
chr11	95753096	95753114	protein_coding	B4galnt2	exon	ENSMUSG00000013418	ProperStrand	4	chr16	23110828	23110938	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.6489
chr5	74489250	74489330	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr2	32858831	32858921	protein_coding	Garnl3	intron	ENSMUSG00000038860	ProperStrand	14	1	-8.5448
chr19	9949345	9949625	protein_coding	Incenp	exon	ENSMUSG00000024660	ProperStrand	111	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-6.0179
chr11	58795625	58795642	protein_coding	Trim11	exon	ENSMUSG00000020455	ProperStrand	43	chr2	26494771	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-6.3046
chr10	24589875	24589893	protein_coding	Med23	utr5	ENSMUSG00000019984	NonProperStrand	3	chr16	23110911	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr13	46862888	46863010	snoRNA	ENSMUSG00000064558_SNORA55	.	ENSMUSG00000064558	ProperStrand	187	chr19	8963025	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-2.3958
chr19	6261981	6262066	protein_coding	Atg2a	utr3	ENSMUSG00000024773	ProperStrand	97	chr1	162968462	162968511	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-5.1403
chr12	100626727	100626743	protein_coding	Foxn3	exon	ENSMUSG00000033713	ProperStrand	74	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-8.5066
chrX	152009278	152009294	protein_coding	Ptchd1	exon	ENSMUSG00000041552	NonProperStrand	294	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-5.7774
mmu-miR-1949	2	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr11	77996570	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-1.4524
chr14	118562250	118562304	protein_coding	Gpr180	utr3	ENSMUSG00000022131	ProperStrand	2	chrX	138754876	138754893	protein_coding	Acsl4	utr3	ENSMUSG00000031278	ProperStrand	31	2	-inf
chr10	79173131	79173413	protein_coding	Bsg	exon	ENSMUSG00000023175	ProperStrand	107	chr9	15119699	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-3.1076
chr1	157924324	157924340	protein_coding	Fam163a	utr3	ENSMUSG00000015484	NonProperStrand	13	chr14	31827478	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	2	-15.9526
chr2	90569860	90569961	protein_coding	Nup160	exon	ENSMUSG00000051329	ProperStrand	49	chr7	52382759	52382814	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	6	-20.5647
chr7	17176694	17176740	protein_coding	Grlf1	intron	ENSMUSG00000058230	ProperStrand	38	chr7	29136525	29136576	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.1665
chr6	120711795	120711856	protein_coding	Cecr2	exon	ENSMUSG00000071226	ProperStrand	39	chr19	8798741	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-5.6406
chr16	26357822	26357839	protein_coding	Cldn1	utr3	ENSMUSG00000022512	NonProperStrand	11	chr1	89673566	89673603	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-6.5694
chr1	168030385	168030520	protein_coding	Dusp27	exon	ENSMUSG00000026564	ProperStrand	47	chr8	124000260	124000283	protein_coding	Gm20388	intron	ENSMUSG00000092329	NonProperStrand	203	7	-inf
chr13	19229339	19229419	protein_coding	Amph	intron	ENSMUSG00000021314	ProperStrand	35	chr11	6315969	6318108	protein_coding	Ppia	exon	ENSMUSG00000071866	ProperStrand	127	2	-inf
chr11	63789819	63789874	protein_coding	Cox10	exon	ENSMUSG00000042148	ProperStrand	21	chr7	116663648	116663748	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.4437
chr11	120439526	120440374	protein_coding	Arhgdia	utr3	ENSMUSG00000025132	ProperStrand	39	chr10	23505149	23505215	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-3.4292
chr6	81992903	81992925	protein_coding	Fam176a	intron	ENSMUSG00000035104	ProperStrand	64	chr16	23111378	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-5.2239
chr14	120683101	120683124	protein_coding	Mbnl2	intron	ENSMUSG00000022139	ProperStrand	15	chr18	35714148	35714238	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-6.1300
chr7	28303871	28303941	protein_coding	Prx	utr3	ENSMUSG00000053198	ProperStrand	21	chr5	121655081	121655100	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-9.4735
chr2	127549537	127549627	protein_coding	Mall	intron	ENSMUSG00000027377	ProperStrand	1	chr2	155156595	155156685	protein_coding	Pigu	intron	ENSMUSG00000038383	ProperStrand	14	1	-inf
chr9	46079741	46079757	protein_coding	Apoa5	utr3	ENSMUSG00000032079	NonProperStrand	12	chr3	123210880	123210980	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.0354
chr10	72137323	72137390	protein_coding	Zwint	utr3	ENSMUSG00000019923	ProperStrand	22	chr14	76247738	76247828	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-6.1297
chr13	70742971	70743071	protein_coding	BC018507	exon	ENSMUSG00000034525	ProperStrand	43	chr16	23111375	23111429	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.7472
chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	chr2	130103432	130103500	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-5.4113
chr9	102625995	102626095	protein_coding	Amotl2	exon	ENSMUSG00000032531	ProperStrand	54	chr19	8799858	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-5.1512
chr17	85482653	85489599	protein_coding	Prepl	utr5	ENSMUSG00000024127	ProperStrand	106	chr11	97643007	97643060	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.5596
chr3	55987230	55987247	protein_coding	Nbea	utr5	ENSMUSG00000027799	NonProperStrand	115	chr11	3232200	3232217	protein_coding	Pik3ip1	exon	ENSMUSG00000034614	ProperStrand	3	1	-18.5045
chr1	129395914	129395992	protein_coding	Tmem163	intron	ENSMUSG00000026347	ProperStrand	7	chr10	39978384	39978460	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-9.8374
chr18	63833774	63833874	protein_coding	Txnl1	exon	ENSMUSG00000024583	ProperStrand	7	chr11	62418017	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-9.9378
chr15	81859570	81859640	protein_coding	Xrcc6	exon	ENSMUSG00000022471	ProperStrand	34	chr5	148180791	148180808	protein_coding	Flt3	exon	ENSMUSG00000042817	NonProperStrand	8	1	-17.9540
chr9	40865562	40865578	protein_coding	Ubash3b	intron	ENSMUSG00000032020	ProperStrand	42	chr11	57872490	57872509	protein_coding	Larp1	utr3	ENSMUSG00000037331	ProperStrand	201	1	-11.6076
chr13	55414293	55414349	protein_coding	Nsd1	exon	ENSMUSG00000021488	ProperStrand	186	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-5.4953
chr6	122678310	122680036	protein_coding	Slc2a3	exon	ENSMUSG00000003153	ProperStrand	682	chr5	130300462	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	6	-1.2273
chr18	63908609	63908625	protein_coding	Wdr7	intron	ENSMUSG00000040560	NonProperStrand	180	chr9	40612122	40612138	snoRNA	ENSMUSG00000075924_Snord14d	.	ENSMUSG00000075924	ProperStrand	131	1	-9.5428
chr4	133807358	133807375	protein_coding	Grrp1	exon	ENSMUSG00000050105	NonProperStrand	4	chr9	15118245	15118315	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-8.9841
chr2	91613185	91613203	protein_coding	Ambra1	exon	ENSMUSG00000040506	ProperStrand	65	chrX	148463344	148463361	protein_coding	Smc1a	intron	ENSMUSG00000041133	NonProperStrand	1	1	-inf
chr7	20010913	20011003	protein_coding	Mark4	utr3	ENSMUSG00000030397	ProperStrand	18	chr4	131908273	131908353	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.4481
chr3	152450610	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	chr9	120039578	120039678	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	8	-5.9568
chr1	145626058	145626192	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	chr3	123210909	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	8	-2.0318
chr3	157689821	157694430	protein_coding	Srsf11	exon	ENSMUSG00000055436	NonProperStrand	3	chr11	6428065	6428088	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-9.3720
chr15	102292980	102293080	protein_coding	Prr13	utr3	ENSMUSG00000023048	ProperStrand	13	chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	5	-inf
chr9	56785450	56785540	protein_coding	Imp3	exon	ENSMUSG00000032288	ProperStrand	3	chr10	23505198	23505278	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-6.9610
chr17	75049343	75049368	protein_coding	Birc6	exon	ENSMUSG00000024073	ProperStrand	110	chr5	121655126	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.6553
chr17	47093996	47094012	protein_coding	Ubr2	intron	ENSMUSG00000023977	NonProperStrand	8	chr13	9483455	9483473	protein_coding	Dip2c	intron	ENSMUSG00000048264	NonProperStrand	51	1	-17.7897
chr2	105012751	105012769	protein_coding	Wt1	utr3	ENSMUSG00000016458	NonProperStrand	338	chr11	6428054	6428169	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	170	-21.1823
chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	chr7	25292427	25295588	protein_coding	Zfp428	utr5	ENSMUSG00000064264	ProperStrand	23	1	-11.8142
chr1	88253672	88253757	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chr2	91436288	91436340	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	3	-5.3152
chr12	33638595	33638614	lincRNA	4933406C10Rik	exon	ENSMUSG00000086543	ProperStrand	52	chr5	149140477	149140533	protein_coding	Slc7a1	utr3	ENSMUSG00000041313	ProperStrand	65	1	-13.4440
chr8	108233712	108233729	protein_coding	4933405L10Rik	exon	ENSMUSG00000013158	ProperStrand	94	chr1	72871120	72871225	protein_coding	Igfbp2	utr5	ENSMUSG00000039323	ProperStrand	406	3	-18.2032
chr8	125627100	125627202	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	chr1	185857228	185857244	protein_coding	1700056E22Rik	exon	ENSMUSG00000044854	ProperStrand	173	1	-8.4902
chr1	167106249	167106308	protein_coding	Sft2d2	utr3	ENSMUSG00000040848	ProperStrand	25	chr4	131908689	131908719	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.6029
chr3	153933541	153933558	protein_coding	Slc44a5	utr3	ENSMUSG00000028360	NonProperStrand	33	chr9	120038551	120038672	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.1461
chr4	149669816	149669832	protein_coding	Rere	intron	ENSMUSG00000039852	NonProperStrand	12	chr13	23626112	23626165	protein_coding	Hist1h2af	exon	ENSMUSG00000061991	ProperStrand	7	1	-22.6201
chr11	68803731	68803902	protein_coding	Pfas	exon	ENSMUSG00000020899	ProperStrand	53	chr7	116663719	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	4	-9.6736
chr2	31340997	31341035	protein_coding	Ass1	intron	ENSMUSG00000076441	ProperStrand	29	chr18	33954838	33954916	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-4.8865
chr2	26451868	26451884	protein_coding	Gm20532	intron	ENSMUSG00000092356	ProperStrand	46	chr16	23111735	23111801	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.3385
chr15	84044536	84044570	protein_coding	Samm50	intron	ENSMUSG00000022437	ProperStrand	51	chr4	131908235	131908296	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-4.7811
chr12	40940586	40940606	protein_coding	Ifrd1	exon	ENSMUSG00000001627	ProperStrand	37	chr4	131866155	131866245	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	5	-18.0323
chr4	43505761	43505851	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr9	98483208	98483298	protein_coding	Copb2	exon	ENSMUSG00000032458	ProperStrand	33	1	-4.1792
chr3	94811096	94811204	protein_coding	Zfp687	utr3	ENSMUSG00000019338	ProperStrand	32	chr2	130102085	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	16	-19.1379
chr14	64852513	64852532	protein_coding	Msra	intron	ENSMUSG00000054733	ProperStrand	15	chr1	162967537	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-6.1639
chr5	88096284	88096300	protein_coding	Csn1s1	exon	ENSMUSG00000070702	NonProperStrand	19	chr15	79908960	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-7.7665
chr2	13496443	13496504	protein_coding	Vim	exon	ENSMUSG00000026728	ProperStrand	33	chr4	32788731	32791593	protein_coding	Mdn1	exon	ENSMUSG00000058006	ProperStrand	184	1	-12.2732
chr9	119296099	119296189	protein_coding	Xylb	intron	ENSMUSG00000035769	NonProperStrand	11	chr7	117189955	117190035	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-6.6445
chr19	47160634	47160710	protein_coding	Usmg5	exon	ENSMUSG00000071528	ProperStrand	5	chr19	8798525	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	3	-19.1865
chr7	125672312	125672331	protein_coding-noncoding	Coq7	utr3	ENSMUSG00000030652	NonProperStrand	2	chr5	118407176	118407276	protein_coding	Nos1	utr3	ENSMUSG00000029361	ProperStrand	11	1	-21.3789
chr7	134341340	134341357	protein_coding	Tbc1d10b	utr3	ENSMUSG00000042492	ProperStrand	187	chr19	44216620	44216685	protein_coding	Bloc1s2	exon	ENSMUSG00000057506	ProperStrand	9	1	-14.9207
chr13	23647191	23647245	protein_coding	Hist1h1d	exon	ENSMUSG00000052565	ProperStrand	78	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-3.5136
chr13	8756716	8766308	protein_coding	Adarb2	utr3	ENSMUSG00000052551	ProperStrand	292	chr11	6428092	6428155	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-0.7725
chr11	6428054	6428154	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr1	187066847	187066917	snoRNA	ENSMUSG00000077571_Snora36b	.	ENSMUSG00000077571	ProperStrand	244	2	-1.9460
chr8	96703729	96704032	protein_coding	Mt1	exon	ENSMUSG00000031765	ProperStrand	92	chr4	131865909	131866611	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.1513
chr5	111214148	111214164	protein_coding	Ulk1	utr3	ENSMUSG00000029512	ProperStrand	92	chr16	23111772	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.2679
chr16	20429186	20429266	LINE	Lx4A	L1	chr16Lx4A20428753	NonProperStrand	1	chr16	20429437	20429527	LTR	RLTR17	ERVK	chr16RLTR1720429445	NonProperStrand	1	1	-inf
chr5	65408159	65408249	protein_coding	Fam114a1	intron	ENSMUSG00000029185	NonProperStrand	8	chr4	131908266	131908346	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-5.0428
chr5	107303155	107303171	protein_coding	Hfm1	intron	ENSMUSG00000043410	ProperStrand	23	chr10	39978337	39978381	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-7.3656
chr12	71146391	71146407	protein_coding	Nin	exon	ENSMUSG00000021068	ProperStrand	95	chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-5.5512
chr10	46823369	46823459	LINE	Lx6	L1	chr10Lx646823374	ProperStrand	1	chr10	44069541	44069631	protein_coding	Atg5	intron	ENSMUSG00000038160	NonProperStrand	3	1	-inf
chr2	26493364	26493503	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr19	8798736	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	28	-5.0946
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr5	122025930	122025948	protein_coding	Aldh2	exon	ENSMUSG00000029455	ProperStrand	108	2	-9.5486
chr7	71882695	71882785	protein_coding	Apba2	intron	ENSMUSG00000030519	NonProperStrand	6	chr1	172410877	172410957	protein_coding	Nos1ap	intron	ENSMUSG00000038473	ProperStrand	5	1	-19.0115
chr6	101485357	101485378	LTR	MTEa	MaLR	chr6MTEa101485361	ProperStrand	45	chr19	8798740	8798784	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-5.3598
chr9	78023114	78023180	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr17	27236036	27236052	protein_coding	Itpr3	exon	ENSMUSG00000042644	ProperStrand	137	1	-4.2825
chr12	3469496	3469512	protein_coding	Asxl2	exon	ENSMUSG00000037486	NonProperStrand	12	chr16	95218874	95218890	protein_coding	Kcnj6	utr5	ENSMUSG00000043301	NonProperStrand	16	1	-19.5274
chr5	65136119	65136136	LTR	ORR1D2-int	MaLR	chr5ORR1D2-int65135280	ProperStrand	30	chr11	5179844	5179869	protein_coding	Znrf3	utr3	ENSMUSG00000041961	ProperStrand	63	1	-14.6252
chr18	39934974	39934990	protein_coding	Pabpc2	exon	ENSMUSG00000051732	NonProperStrand	66	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-5.6555
chr7	148445675	148445719	protein_coding	Phrf1	exon	ENSMUSG00000038611	ProperStrand	86	chr7	117166721	117166769	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	2	-6.9159
chr3	94675066	94683961	protein_coding	Pogz	exon	ENSMUSG00000038902	ProperStrand	65	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-2.0526
chr2	158185523	158185554	lincRNA	9430008C03Rik	exon	ENSMUSG00000085385	ProperStrand	1039	chr6	115758011	115758118	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-0.7100
chr4	131826037	131826127	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	chr11	6428088	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-0.7980
chr1	78285385	78285465	SINE	B1_Mur2	Alu	chr1B1_Mur278285358	ProperStrand	1	chr9	86938118	86938208	protein_coding	Cyb5r4	intron	ENSMUSG00000032872	NonProperStrand	2	1	-inf
chr5	111121066	111121157	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	chr3	88497864	88497979	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	2	-2.3266
chr7	52309977	52309994	protein_coding	Prrg2	exon	ENSMUSG00000007837	NonProperStrand	281	chr9	64024466	64024485	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	1	-5.3177
chr16	30388440	30388458	protein_coding	Atp13a3	utr5	ENSMUSG00000022533	ProperStrand	45	chr4	131865856	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.2312
chr16	48000970	48001060	LINE	Lx9	L1	chr16Lx948000908	NonProperStrand	1	chr16	47991560	47991640	SINE	MIR	MIR	chr16MIR47991509	ProperStrand	1	1	-inf
chrX	99341624	99341697	protein_coding	Ercc6l	exon	ENSMUSG00000051220	ProperStrand	3	chr16	23111377	23111467	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-6.9982
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr19	39917317	39917333	protein_coding	Cyp2c69	utr3	ENSMUSG00000092008	NonProperStrand	83	1	-7.9443
chr9	15119630	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	chr5	23358027	23358098	snoRNA	ENSMUSG00000093321_Snord93	.	ENSMUSG00000093321	ProperStrand	218	8	-10.1152
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-3.8881
chr4	58448442	58448532	protein_coding	Lpar1	utr3	ENSMUSG00000038668	ProperStrand	2	chr6	119877229	119884330	protein_coding	Wnk1	exon	ENSMUSG00000045962	ProperStrand	221	1	-18.6856
chr4	147385125	147385141	protein_coding	Clcn6	exon	ENSMUSG00000029016	ProperStrand	120	chr12	17552963	17552995	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-3.7709
chr7	34992750	34992767	protein_coding	Gpi1	exon	ENSMUSG00000036427	NonProperStrand	40	chr11	77995229	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-6.9875
chr5	116010969	116011008	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	chr5	108334263	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-1.9806
chr4	155560215	155560305	protein_coding	Agrn	intron	ENSMUSG00000041936	ProperStrand	175	chr11	69483198	69483278	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-0.8723
chr11	113730275	113731050	protein_coding	Sdk2	exon	ENSMUSG00000041592	NonProperStrand	98	chr4	131865855	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	9	-14.6248
chr13	9833553	9833652	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr7	16524266	16524305	protein_coding	Gltscr2	exon	ENSMUSG00000041560	ProperStrand	127	1	-3.5372
chr12	71426202	71426218	protein_coding	Trim9	intron	ENSMUSG00000021071	ProperStrand	6	chr10	39978322	39978371	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-10.1727
chr3	8929751	8929841	protein_coding	Tpd52	utr3	ENSMUSG00000027506	ProperStrand	37	chr9	120037910	120037990	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-5.6473
chr8	55606091	55606134	antisense	Spcs3	.	ENSMUSG00000054408	ProperStrand	30	chr19	8963129	8963164	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.5028
chr14	106656368	106656385	LINE	Lx3A	L1	chr14Lx3A106656305	NonProperStrand	1	chr16	23110874	23110907	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr7	125262712	125262781	protein_coding	Arl6ip1	utr3	ENSMUSG00000030654	ProperStrand	57	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	8	-15.1518
chr13	88569463	88569483	LTR	RMER6D	ERVK	chr13RMER6D88569354	ProperStrand	42	chr4	131865941	131865982	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.3470
chr15	37930399	37930419	protein_coding	Ubr5	exon	ENSMUSG00000037487	ProperStrand	258	chr1	162965986	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-2.3147
chr5	74489203	74489283	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr10	80924479	80924569	protein_coding	Celf5	utr3	ENSMUSG00000034818	ProperStrand	16	2	-13.2532
chr5	130458032	130458083	protein_coding	Vkorc1l1	exon	ENSMUSG00000066735	ProperStrand	8	chr4	131908689	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.7736
chr11	102294588	102294606	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr3	97512326	97512397	protein_coding	Pde4dip	intron	ENSMUSG00000038170	ProperStrand	25	2	-16.8390
chr2	26494775	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	chr19	12086456	12086496	tRNA	tRNA109-ValTAC	.	226507	ProperStrand	96	1	-2.2903
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr8	24042846	24042864	protein_coding	Myst3	exon	ENSMUSG00000031540	ProperStrand	111	2	-7.7936
chr8	47113282	47113298	protein_coding	Lrp2bp	utr3	ENSMUSG00000031637	ProperStrand	14	chr7	116663633	116663710	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-5.2435
chr2	113038488	113038504	protein_coding	Ryr3	intron	ENSMUSG00000057378	NonProperStrand	24	chr9	120039533	120039557	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-5.0594
chr17	32504561	32504651	protein_coding-noncoding	Wiz	utr3	ENSMUSG00000024050	ProperStrand	1	chr17	32504764	32504844	protein_coding	Wiz	exon	ENSMUSG00000024050	ProperStrand	26	1	-inf
chr5	89663839	89663855	protein_coding	Slc4a4	exon	ENSMUSG00000060961	NonProperStrand	195	chr11	69481376	69481443	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-1.2825
chr19	21931888	21931990	protein_coding	Tmem2	utr3	ENSMUSG00000024754	ProperStrand	133	chr4	116827858	116827889	snoRNA	ENSMUSG00000064751_SNORD46	.	ENSMUSG00000064751	ProperStrand	132	21	-20.3125
chr7	116664116	116665164	protein_coding	Rpl27a	exon	ENSMUSG00000046364	ProperStrand	149	chr11	69483204	69483284	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.0699
chr7	6265025	6265042	SINE	RSINE1	B4	chr7RSINE16265009	NonProperStrand	7	chr18	73693123	73693148	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-9.9039
chr8	86523001	86523091	protein_coding	Samd1	exon	ENSMUSG00000079003	ProperStrand	20	chr7	116663636	116663729	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	9	-20.4373
chr17	13201149	13201206	protein_coding	Sod2	exon	ENSMUSG00000006818	ProperStrand	17	chr3	84995363	84995380	protein_coding	Arfip1	intron	ENSMUSG00000074513	NonProperStrand	56	1	-16.0072
chr16	57391626	57391685	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr11	98878344	98878416	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	NonProperStrand	1	1	-inf
chr13	38140837	38141010	protein_coding	Riok1	exon	ENSMUSG00000021428	ProperStrand	1	chr17	24857742	24857822	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-inf
chr6	122660339	122660429	protein_coding	Nanog	intron	ENSMUSG00000012396	NonProperStrand	2	chr2	121761818	121761898	protein_coding	Casc4	utr3	ENSMUSG00000060227	NonProperStrand	1	1	-inf
chr3	58345054	58345580	protein_coding	Eif2a	exon	ENSMUSG00000027810	ProperStrand	11	chr19	8800085	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-11.0619
chr7	117166750	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	chr4	131866614	131866676	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	3	-3.6764
chr19	5380273	5380469	protein_coding	Sart1	exon	ENSMUSG00000039148	ProperStrand	32	chr11	97642952	97642970	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.5978
chr5	5322630	5322646	protein_coding	Cdk14	intron	ENSMUSG00000028926	ProperStrand	20	chr7	29136524	29136573	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.3737
chr10	80257913	80257941	protein_coding	Dot1l	utr3	ENSMUSG00000061589	ProperStrand	48	chr1	162965535	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-9.1210
chr11	94075640	94075746	protein_coding	Tob1	exon	ENSMUSG00000037573	ProperStrand	4	chr16	17894461	17894477	protein_coding	Tssk1	exon	ENSMUSG00000041566	NonProperStrand	62	1	-19.6217
chr2	90235313	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	113152656	113152674	protein_coding	Vac14	intron	ENSMUSG00000010936	ProperStrand	27	2	-9.8247
chr17	24578632	24578649	protein_coding	Dnase1l2	exon	ENSMUSG00000024136	ProperStrand	1	chr14	33005040	33005091	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-inf
chr4	131908689	131908754	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	chr7	89110636	89110655	snoRNA	ENSMUSG00000089111_SNORA74	.	ENSMUSG00000089111	ProperStrand	7	1	-5.0493
chr7	52377833	52377869	protein_coding	Rps11	exon	ENSMUSG00000003429	ProperStrand	49	chr10	86221857	86221873	protein_coding	BC030307	exon	ENSMUSG00000044937	ProperStrand	77	1	-13.2233
chr6	3794653	3794670	SINE	B4A	B4	chr6B4A3794525	NonProperStrand	26	chr6	115757992	115758123	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-7.1310
chr9	21934462	21934478	protein_coding	Acp5	exon	ENSMUSG00000001348	ProperStrand	66	chr18	73693171	73693188	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-5.3380
chr1	173433170	173433204	protein_coding	B930036N10Rik	utr3	ENSMUSG00000091993	ProperStrand	150	chr3	68889172	68889259	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-1.7093
chr4	43505743	43505823	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr1	183751694	183755778	protein_coding	Lbr	exon	ENSMUSG00000004880	ProperStrand	97	1	-2.2390
chr2	3693068	3693084	protein_coding	Fam107b	intron	ENSMUSG00000026655	NonProperStrand	15	chr11	62416602	62416653	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-7.9356
chr9	118462589	118462679	protein_coding	Golga4	utr3	ENSMUSG00000038708	ProperStrand	95	chr16	23111753	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.2241
chr1	182827704	182827794	protein_coding	Lefty2	exon	ENSMUSG00000066652	ProperStrand	48	chr11	68886962	68887042	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	7	-19.4971
chr15	79737825	79737849	protein_coding	Apobec3	utr3	ENSMUSG00000009585	ProperStrand	14	chr19	42179870	42179886	protein_coding	Pi4k2a	exon	ENSMUSG00000025178	ProperStrand	23	1	-18.1755
chr2	32781398	32781415	protein_coding	Lrsam1	utr3	ENSMUSG00000026792	ProperStrand	80	chr5	108334222	108334333	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-4.2697
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr11	115451723	115451739	protein_coding	Gga3	exon	ENSMUSG00000020740	NonProperStrand	50	1	-8.1600
chr13	38075354	38077183	protein_coding	Ssr1	exon	ENSMUSG00000021427	ProperStrand	65	chr17	24856654	24856754	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-6.2690
chr18	35102297	35102344	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	chr3	108357255	108357408	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	14	-9.5353
chr7	31359539	31359639	protein_coding	Wbp7	exon	ENSMUSG00000006307	ProperStrand	180	chr18	73693108	73693129	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-3.4374
chr9	109973620	109975183	protein_coding	Mtap4	exon	ENSMUSG00000032479	ProperStrand	188	chr4	131865871	131865951	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	8	-7.3651
chr15	79202617	79202642	protein_coding	Tmem184b	intron	ENSMUSG00000009035	ProperStrand	37	chr7	116663649	116663760	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.3721
chr18	12172461	12172477	protein_coding	6030446N20Rik	intron	ENSMUSG00000049411	ProperStrand	235	chr17	26360445	26360489	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	1	-7.3041
chr9	88351521	88356551	protein_coding	Syncrip	exon	ENSMUSG00000032423	ProperStrand	35	chr4	131908744	131908824	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.0337
chr5	104948131	104948147	protein_coding	BC005561	exon	ENSMUSG00000079065	ProperStrand	7	chr8	13876096	13876226	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	2	-18.4126
chr16	15810797	15810832	protein_coding	Prkdc	exon	ENSMUSG00000022672	ProperStrand	22	chr10	23506277	23506347	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	3	-19.4360
chr13	79659338	79659354	LTR	RodERV21-int	ERV1	chr13RodERV21-int79658190	ProperStrand	43	chr7	28535900	28535945	protein_coding	Zfp60	utr3	ENSMUSG00000037640	ProperStrand	14	2	-inf
chr8	15030283	15030383	protein_coding	Kbtbd11	utr3	ENSMUSG00000055675	ProperStrand	10	chr16	23111741	23111779	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.2069
chr17	32335155	32335203	protein_coding	Brd4	exon	ENSMUSG00000024002	ProperStrand	121	chr15	58577335	58577351	protein_coding	Fer1l6	intron	ENSMUSG00000037106	ProperStrand	54	1	-12.1175
chr13	9833577	9833619	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr5	31773496	31775178	protein_coding	Zfp512	exon	ENSMUSG00000062761	ProperStrand	44	1	-5.5589
chr9	78023108	78023148	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr8	86424758	86439340	protein_coding	Lphn1	utr5	ENSMUSG00000013033	ProperStrand	221	3	-8.4506
chr11	77992645	77992664	protein_coding	Tlcd1	exon	ENSMUSG00000019437	NonProperStrand	1	chr1	38092957	38092985	protein_coding	Eif5b	exon	ENSMUSG00000026083	ProperStrand	118	1	-inf
chr14	20622365	20624524	protein_coding	Nid2	exon	ENSMUSG00000021806	ProperStrand	372	chr14	52781009	52781040	protein_coding	Supt16h	utr3	ENSMUSG00000035726	ProperStrand	193	2	-11.7454
chr17	56739847	56740291	protein_coding	Safb	exon	ENSMUSG00000071054	ProperStrand	79	chr8	124066021	124066038	protein_coding	Gm20388	intron	ENSMUSG00000092329	NonProperStrand	203	1	-10.3157
chr8	124078291	124078309	protein_coding	Fbxo31	exon	ENSMUSG00000031811	ProperStrand	9	chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	1	-13.0720
chr4	132849427	132849443	protein_coding	Wdtc1	utr3	ENSMUSG00000037622	NonProperStrand	14	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.3681
chr2	9908247	9908337	protein_coding	Taf3	intron	ENSMUSG00000025782	NonProperStrand	4	chr2	25973319	25973399	protein_coding	Nacc2	intron	ENSMUSG00000026932	ProperStrand	98	1	-18.0384
chr1	74415168	74415184	protein_coding	Gm216	exon	ENSMUSG00000073650	ProperStrand	33	chr1	88995234	88995253	protein_coding	Alpi	exon	ENSMUSG00000079440	NonProperStrand	7	1	-18.6093
chr1	78485399	78485416	protein_coding	Farsb	exon	ENSMUSG00000026245	ProperStrand	40	chr7	127897723	127897755	protein_coding	Vwa3a	intron	ENSMUSG00000030889	NonProperStrand	4	1	-19.2351
chr11	97189937	97189965	protein_coding	Mrpl45	utr3	ENSMUSG00000018882	NonProperStrand	1	chr13	73463407	73463423	protein_coding	Ndufs6	intron	ENSMUSG00000021606	NonProperStrand	52	1	-inf
chr16	23110828	23110860	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	chr13	21261553	21261599	tRNA	tRNA999-MetCAT	.	1369464	ProperStrand	63	2	-0.7310
chr4	106434699	106435060	protein_coding	Acot11	exon	ENSMUSG00000034853	ProperStrand	61	chr8	84531362	84531379	protein_coding	Inpp4b	intron	ENSMUSG00000037940	NonProperStrand	33	1	-14.4845
chr7	137767017	137767107	protein_coding	Tacc2	exon	ENSMUSG00000030852	ProperStrand	95	chr19	8963092	8963172	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.5487
chr15	99433435	99433452	protein_coding	Aqp6	exon	ENSMUSG00000043144	NonProperStrand	45	chr9	120038548	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.5633
chr10	90076969	90076990	protein_coding	Anks1b	intron	ENSMUSG00000058589	NonProperStrand	230	chr1	89681130	89681239	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-2.9204
chr1	102076760	102076790	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	chr8	98269966	98270035	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	2	-3.6162
chr1	183835772	183835837	protein_coding	Enah	utr3	ENSMUSG00000022995	ProperStrand	196	chr10	23505191	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-1.9568
chr1	124298935	124298951	LINE	Lx3_Mus	L1	chr1Lx3_Mus124298684	ProperStrand	10	chr2	30678112	30678203	protein_coding	Mettl11a	utr3	ENSMUSG00000026857	ProperStrand	51	1	-17.4450
chr9	57217029	57217046	LINE	Lx4A	L1	chr9Lx4A57216705	ProperStrand	16	chr7	17401743	17401760	protein_coding	Strn4	exon	ENSMUSG00000030374	NonProperStrand	11	1	-18.9924
chr11	23191469	23191516	protein_coding	Xpo1	exon	ENSMUSG00000020290	ProperStrand	123	chr19	44188368	44188431	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	3	-14.5378
chr9	119664282	119664299	protein_coding	Scn11a	exon	ENSMUSG00000034115	ProperStrand	55	chr19	8799581	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-6.9395
chr17	35089181	35089207	processed_transcript	1110038B12Rik	.	ENSMUSG00000092203	ProperStrand	126	chr15	34370544	34370675	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-2.2430
chr16	5256015	5256031	protein_coding	Fam86	utr5	ENSMUSG00000022544	ProperStrand	231	chr1	162965531	162965562	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.1118
chr5	35307757	35307796	protein_coding	Rgs12	exon	ENSMUSG00000029101	ProperStrand	13	chr16	23111776	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-7.8588
chr10	60766770	60766795	protein_coding	Prf1	utr3	ENSMUSG00000037202	ProperStrand	1	chr3	123210895	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-inf
chr13	61035763	61035843	protein_coding	Ctla2a	utr3	ENSMUSG00000044258	NonProperStrand	2	chr17	22020735	22020825	protein_coding	2210404O09Rik	intron	ENSMUSG00000078546	NonProperStrand	1	1	-inf
chr11	113640404	113640487	protein_coding	Sdk2	utr3	ENSMUSG00000041592	ProperStrand	17	chr7	116663633	116663695	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.8573
chr16	90386836	90386853	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	chr12	30604781	30604797	protein_coding	Myt1l	exon	ENSMUSG00000061911	ProperStrand	38	1	-13.1316
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr2	129035685	129036454	protein_coding	Slc20a1	exon	ENSMUSG00000027397	ProperStrand	81	1	-8.1901
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr5	100855902	100855953	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	3	-4.5817
chr12	17552949	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr7	86611342	86611379	tRNA	tRNA387-ArgTCG	.	927649	ProperStrand	77	1	-4.6083
chr11	6239207	6239879	protein_coding	Ogdh	exon	ENSMUSG00000020456	ProperStrand	42	chr6	55019357	55019440	protein_coding	Gars	exon	ENSMUSG00000029777	ProperStrand	71	1	-13.6949
chr13	112540780	112541440	protein_coding	Map3k1	exon	ENSMUSG00000021754	ProperStrand	113	chr11	53194123	53194149	protein_coding	Aff4	exon	ENSMUSG00000049470	ProperStrand	94	1	-11.1398
chr11	4919315	4926399	protein_coding	Ap1b1	exon	ENSMUSG00000009090	ProperStrand	43	chr17	24857717	24857811	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	7	-19.2868
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr9	120038471	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	3	-2.7899
chr11	96909974	96910074	protein_coding	Mrpl10	utr3	ENSMUSG00000001445	ProperStrand	43	chr1	162965536	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.8927
chr2	154364056	154364146	protein_coding	Cbfa2t2	utr3	ENSMUSG00000038533	ProperStrand	99	chr4	131908239	131908319	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.7753
chr8	3803263	3803343	misc_RNA	RNaseP_nuc	.	ENSMUSG00000088025	ProperStrand	328	chr9	120037902	120037992	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-1.7011
chr2	13501068	13501158	protein_coding	Vim	exon	ENSMUSG00000026728	ProperStrand	33	chr7	117189957	117190037	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.4547
chr8	108776936	108776953	lincRNA	Gm17245	intron	ENSMUSG00000067626	ProperStrand	27	chr14	64147097	64147113	protein_coding	Mtmr9	exon	ENSMUSG00000035078	ProperStrand	14	1	-18.0026
chr2	90235304	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	102499187	102499204	protein_coding	Slc1a2	utr5	ENSMUSG00000005089	NonProperStrand	7	1	-8.8025
chr11	116938340	116938427	lincRNA	2810008D09Rik	exon	ENSMUSG00000086859	ProperStrand	6	mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	4	-inf
chr1	107743296	107743313	protein_coding	Tnfrsf11a	utr3	ENSMUSG00000026321	NonProperStrand	100	chr10	23505721	23505773	protein_coding	Rps12	exon	ENSMUSG00000061983	ProperStrand	309	1	-9.0046
chr16	89790174	89790297	protein_coding	Tiam1	intron	ENSMUSG00000002489	ProperStrand	80	chr2	130102054	130102084	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	2	-7.9366
chr6	28476928	28476963	protein_coding	Snd1	exon	ENSMUSG00000001424	ProperStrand	210	chr18	35714239	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-1.3655
chr7	52401155	52401356	protein_coding	Aldh16a1	exon	ENSMUSG00000007833	ProperStrand	27	chr4	3762227	3762293	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	1	-11.1021
chr15	102264995	102265028	protein_coding	Sp1	utr3	ENSMUSG00000001280	ProperStrand	124	chr4	103035919	103035935	protein_coding	Oma1	intron	ENSMUSG00000035069	ProperStrand	19	1	-14.1943
chr12	53383597	53383616	protein_coding	Nubpl	intron	ENSMUSG00000035142	ProperStrand	16	chr4	131908771	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.4136
chr7	35142817	35142901	protein_coding	Lsm14a	exon	ENSMUSG00000066568	ProperStrand	31	chr7	116664810	116664900	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.7407
chr18	61515378	61515394	protein_coding	Ppargc1b	intron	ENSMUSG00000033871	ProperStrand	5	chr1	162967536	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-8.4848
chr17	12442383	12442469	protein_coding	Map3k4	exon	ENSMUSG00000014426	ProperStrand	36	chr16	23111389	23111479	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	5	-10.2259
mmu-miR-6238	1	22	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr1	89681187	89681327	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	5	-12.6577
chr6	115581297	115581342	protein_coding	Raf1	exon	ENSMUSG00000000441	ProperStrand	30	chr4	149309900	149309975	protein_coding	Spsb1	intron	ENSMUSG00000039911	ProperStrand	15	1	-17.6229
chr2	26494779	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	chr3	96304980	96305010	tRNA	tRNA746-GlyTCC	.	1839864	ProperStrand	12	2	-10.2021
chr11	3037472	3037503	protein_coding	Sfi1	intron	ENSMUSG00000023764	NonProperStrand	20	chr1	16092599	16092783	protein_coding	Rpl7	exon	ENSMUSG00000043716	ProperStrand	93	1	-14.6517
chr8	127353612	127353645	protein_coding	Trim67	utr3	ENSMUSG00000036913	NonProperStrand	8	chr7	52382234	52382269	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-12.4159
chr5	135636851	135636895	protein_coding	Tbl2	utr3	ENSMUSG00000005374	ProperStrand	28	chr16	23110940	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-3.6312
chr4	131908802	131908893	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	chr3	19528389	19528851	tRNA	tRNA28-TyrGTA	.	712108	ProperStrand	2	1	-8.0337
chr2	24825186	24827046	protein_coding	Wdr85	exon	ENSMUSG00000026975	ProperStrand	323	chr4	48598305	48598381	protein_coding	Tmeff1	utr5	ENSMUSG00000028347	ProperStrand	47	1	-10.4322
chr17	26067553	26067570	lincRNA	Gm16278	intron	ENSMUSG00000084862	ProperStrand	2	chr5	130295433	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-12.6593
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr14	57024474	57024501	protein_coding	Rnf17	exon	ENSMUSG00000000365	ProperStrand	16	1	-7.0757
chr11	94418465	94418493	protein_coding	Acsf2	utr3	ENSMUSG00000076435	NonProperStrand	4	chr4	131908689	131908820	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-6.2660
chr10	117252734	117252766	protein_coding	Rap1b	utr3	ENSMUSG00000052681	ProperStrand	15	chr17	24857783	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	3	-11.7335
chr7	86286542	86286583	protein_coding	Mfge8	exon	ENSMUSG00000030605	ProperStrand	73	chr7	148634747	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	9	-inf
chr5	76728832	76728848	protein_coding	Clock	intron	ENSMUSG00000029238	NonProperStrand	64	chr1	88247814	88247862	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-4.9718
chr2	26493391	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr10	6063958	6063977	protein_coding	Akap12	intron	ENSMUSG00000038587	ProperStrand	1008	2	-2.2968
chr8	73290437	73290503	protein_coding	Ifi30	exon	ENSMUSG00000031838	ProperStrand	40	chr5	130295432	130295522	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	2	-9.8392
chr9	119011770	119011786	protein_coding	Dlec1	exon	ENSMUSG00000038060	NonProperStrand	27	chr2	26493392	26493445	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-5.2747
chr10	79755527	79756801	protein_coding	Rps15	exon	ENSMUSG00000063457	ProperStrand	119	chr10	23505148	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-3.8855
chr16	90386834	90386852	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	chr17	35299507	35299553	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-3.7358
chr2	90235295	90235340	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	162898448	162900131	protein_coding	Mybl2	exon	ENSMUSG00000017861	ProperStrand	230	2	-3.6987
chr7	52714594	52714915	protein_coding	Ftl1	exon	ENSMUSG00000050708	ProperStrand	807	chr10	79756765	79756837	protein_coding	Rps15	utr3	ENSMUSG00000063457	ProperStrand	119	1	-6.7550
chr5	136707644	136707661	protein_coding	Sh2b2	exon	ENSMUSG00000005057	NonProperStrand	101	chr5	138612970	138612986	protein_coding	Mcm7	utr5	ENSMUSG00000029730	ProperStrand	258	1	-9.3444
chr3	40746502	40746592	LTR	ORR1A2	MaLR	chr3ORR1A240746398	NonProperStrand	1	chr3	40746659	40746749	SINE	PB1D10	Alu	chr3PB1D1040746680	ProperStrand	1	1	-inf
chr16	5197858	5198827	protein_coding	Nagpa	exon	ENSMUSG00000023143	ProperStrand	6	chr3	152450608	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	1	-13.5617
chr18	12339204	12339294	protein_coding-noncoding	3110002H16Rik	utr5	ENSMUSG00000024410	NonProperStrand	1	chr18	12339609	12339689	protein_coding	3110002H16Rik	intron	ENSMUSG00000024410	NonProperStrand	1	1	-inf
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr15	101914694	101914762	protein_coding	Eif4b	exon	ENSMUSG00000058655	ProperStrand	484	2	-5.5158
chr19	25676790	25676809	protein_coding	Dmrt1	intron	ENSMUSG00000024837	NonProperStrand	5	chr16	23111372	23111435	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-5.8178
chr19	22926636	22926662	protein_coding	Trpm3	intron	ENSMUSG00000052387	ProperStrand	54	chr4	131865868	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.9337
chr2	38579136	38579177	protein_coding	Nr6a1	utr3	ENSMUSG00000063972	ProperStrand	52	chr4	131908689	131908751	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-4.2446
chr6	71832615	71832673	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	chr18	74938203	74938303	snoRNA	ENSMUSG00000089235_SCARNA17	.	ENSMUSG00000089235	ProperStrand	1128	1	-0.6988
chrX	165695583	165695599	protein_coding	Arhgap6	exon	ENSMUSG00000031355	ProperStrand	74	chr10	110918559	110918629	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-5.2909
chr18	60845623	60845659	protein_coding	Ndst1	utr3	ENSMUSG00000054008	ProperStrand	38	chr7	29136613	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-5.4611
chr11	104092900	104143687	protein_coding	Mapt	utr5	ENSMUSG00000018411	ProperStrand	8	chr16	23110902	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-5.7082
chr11	55296195	55296318	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	chr3	153574574	153574654	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	10	-19.3670
chr4	141148089	141148107	protein_coding	Fblim1	intron	ENSMUSG00000006219	ProperStrand	26	chr4	131908809	131908871	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.5345
chr17	56151755	56151873	protein_coding	Mpnd	exon	ENSMUSG00000003199	ProperStrand	71	chr16	23111695	23111785	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.6423
chr11	96679889	96679923	protein_coding	Nfe2l1	utr3	ENSMUSG00000038615	ProperStrand	118	chr6	125111961	125112052	protein_coding	Gapdh	utr3	ENSMUSG00000057666	ProperStrand	356	1	-8.3922
chr14	76956323	76956339	protein_coding	Serp2	utr5	ENSMUSG00000052584	NonProperStrand	41	chr5	121655099	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.4679
chr9	77830844	77830871	protein_coding	Elovl5	utr3	ENSMUSG00000032349	ProperStrand	32	chr10	23505149	23505234	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-10.8261
chr7	102411281	102411371	LTR	LTR78	ERV1	chr7LTR78102411228	ProperStrand	1	chr7	102411115	102411205	LTR	MLT1A	MaLR	chr7MLT1A102410906	NonProperStrand	1	1	-inf
chr2	25446005	25446053	protein_coding	B230208H17Rik	intron	ENSMUSG00000015087	NonProperStrand	2	chr17	23956195	23956297	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	1	-19.9513
chr18	73693109	73693151	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr7	52381972	52382040	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	9	-8.0900
chr9	78023109	78023148	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr3	89744007	89744127	protein_coding	Atp8b2	utr3	ENSMUSG00000060671	ProperStrand	140	1	-4.2416
chr11	74473259	74473349	protein_coding	1300001I01Rik	exon	ENSMUSG00000020741	ProperStrand	76	chr5	135821970	135822050	protein_coding	Fkbp6	exon	ENSMUSG00000040013	ProperStrand	1	1	-inf
chr19	3906682	3906698	protein_coding	Tcirg1	utr5	ENSMUSG00000001750	NonProperStrand	15	chrX	98640641	98641460	protein_coding	Nono	exon	ENSMUSG00000031311	ProperStrand	102	1	-15.0765
chrX	71518324	71518380	protein_coding	Rpl10	exon	ENSMUSG00000008682	ProperStrand	71	chr13	24567501	24567544	protein_coding	Cmah	utr3	ENSMUSG00000016756	NonProperStrand	53	1	-13.2247
chr4	94486898	94486925	protein_coding	Tek	exon	ENSMUSG00000006386	ProperStrand	10	chr9	120039585	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-11.1496
chrX	12741982	12742445	protein_coding	Usp9x	exon	ENSMUSG00000031010	ProperStrand	174	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-0.7601
chr10	41644311	41644329	protein_coding	Armc2	exon	ENSMUSG00000071324	ProperStrand	281	chr5	108336363	108336441	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-2.0880
chr6	122270050	122270237	protein_coding	Phc1	exon	ENSMUSG00000040669	ProperStrand	158	chr11	5181346	5181363	protein_coding	Znrf3	exon	ENSMUSG00000041961	ProperStrand	63	1	-11.2720
chr4	131908363	131908475	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr2	129627400	129627416	protein_coding	Stk35	exon	ENSMUSG00000037885	NonProperStrand	10	1	-10.9102
chr8	13167847	13167872	protein_coding	Lamp1	exon	ENSMUSG00000031447	ProperStrand	92	chr5	24010851	24010869	protein_coding	Gbx1	exon	ENSMUSG00000067724	ProperStrand	15	1	-15.2794
chr1	59539683	59539700	protein_coding	Fzd7	utr5	ENSMUSG00000041075	ProperStrand	373	chr17	35088957	35089021	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-2.4632
chr1	153759644	153759664	protein_coding	1700025G04Rik	intron	ENSMUSG00000032666	NonProperStrand	35	chr1	192712615	192712631	protein_coding	Rps6kc1	exon	ENSMUSG00000089872	ProperStrand	241	1	-11.6135
chr16	20506474	20506501	protein_coding	Eif2b5	exon	ENSMUSG00000003235	ProperStrand	38	chr12	60141414	60141478	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	3	-17.5522
chr8	113680843	113680890	protein_coding	Glg1	utr3	ENSMUSG00000003316	ProperStrand	83	chr3	153991597	153991614	protein_coding	Lhx8	utr5	ENSMUSG00000093486	NonProperStrand	47	1	-13.1565
chr3	27327882	27327903	protein_coding	Fndc3b	exon	ENSMUSG00000039286	ProperStrand	31	chr1	162965982	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-4.8589
chr11	62418014	62418067	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	chr16	23109029	23109090	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	4	-3.1807
chr9	66794526	66794614	protein_coding	Rps27l	intron	ENSMUSG00000036781	ProperStrand	11	chr17	24857723	24857813	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-9.1031
chr3	65335274	65335368	protein_coding	Tiparp	exon	ENSMUSG00000034640	ProperStrand	14	chr1	162966024	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-6.4421
chr4	63389602	63389618	protein_coding	Tnfsf15	utr3	ENSMUSG00000050395	NonProperStrand	121	chr11	83107881	83107903	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	1	-7.4363
chr1	182519537	182519637	protein_coding	Parp1	exon	ENSMUSG00000026496	ProperStrand	227	chrX	100721249	100721267	pseudogene	Gm9785	.	ENSMUSG00000043661	ProperStrand	1	1	-inf
chr4	43104192	43108627	protein_coding	Unc13b	exon	ENSMUSG00000028456	NonProperStrand	11	chr6	71832603	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	3	-19.3880
chr2	129998643	129998711	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr4	125309666	125309766	protein_coding	Grik3	exon	ENSMUSG00000001985	ProperStrand	126	1	-6.6348
chr8	87498015	87498115	protein_coding	Prdx2	utr3	ENSMUSG00000005161	ProperStrand	20	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.3741
chr9	57385425	57385441	protein_coding	2310046O06Rik	utr5	ENSMUSG00000032305	ProperStrand	135	chr14	52829546	52829570	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-6.5907
chr16	91565090	91565109	protein_coding	Ifngr2	utr3	ENSMUSG00000022965	ProperStrand	2	chr11	106362637	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-14.8626
chr8	3803233	3803323	misc_RNA	RNaseP_nuc	.	ENSMUSG00000088025	ProperStrand	328	chr2	17979667	17979684	protein_coding	Mllt10	intron	ENSMUSG00000026743	NonProperStrand	4	1	-15.5952
chr2	90235292	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	80128305	80128322	protein_coding	Lrrtm4	intron	ENSMUSG00000052581	ProperStrand	17	1	-6.9523
chr2	103608571	103608595	protein_coding	Caprin1	exon	ENSMUSG00000027184	ProperStrand	145	chr11	116938694	116938752	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-4.4472
chr9	50816824	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	chr16	23110528	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-2.4673
chr9	4299367	4302483	protein_coding	Aasdhppt	exon	ENSMUSG00000025894	ProperStrand	121	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.8133
chr5	115939525	115939612	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr19	8800085	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	14	-19.1577
chr18	60937530	60938088	protein_coding	Rps14	exon	ENSMUSG00000024608	ProperStrand	154	chr8	108216800	108216817	protein_coding	Rltpr	exon	ENSMUSG00000050357	NonProperStrand	22	1	-13.4555
chr2	179670693	179673154	protein_coding	Taf4a	exon	ENSMUSG00000039117	ProperStrand	15	chr4	131908770	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.5353
chr14	80168711	80168727	protein_coding	Pcdh8	exon	ENSMUSG00000036422	ProperStrand	2	chr3	123210854	123210923	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-9.1566
chr8	124406080	124406137	protein_coding	Slc7a5	utr3	ENSMUSG00000040010	ProperStrand	166	chr5	144691894	144691913	protein_coding	Pms2	exon	ENSMUSG00000079109	ProperStrand	21	1	-13.3981
chr2	26493419	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr9	15118530	15118552	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	1	-2.4820
chr6	122556875	122556965	protein_coding	Gdf3	exon	ENSMUSG00000030117	ProperStrand	20	chr4	131865853	131865943	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.6810
chr10	127947624	127947641	protein_coding	Esyt1	utr3	ENSMUSG00000025366	NonProperStrand	32	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-10.1937
chr4	124720956	124721514	protein_coding	Gnl2	exon	ENSMUSG00000028869	ProperStrand	23	chr5	130300420	130300510	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.2653
chr17	87835004	87835039	protein_coding	Calm2	exon	ENSMUSG00000036438	ProperStrand	59	chr9	110453895	110453929	protein_coding	Setd2	exon	ENSMUSG00000044791	ProperStrand	51	1	-13.6747
chr10	84183178	84183268	protein_coding	Polr3b	exon	ENSMUSG00000034453	ProperStrand	41	chr1	136521322	136521383	protein_coding	Kdm5b	utr5	ENSMUSG00000042207	ProperStrand	223	1	-11.4487
chr15	77597977	77597993	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr11	55296195	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	2	-3.6469
chr13	48997537	48997553	protein_coding	Fam120a	exon	ENSMUSG00000038014	ProperStrand	76	chr11	6428103	6428154	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.7712
chr13	9833566	9833674	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr17	13184995	13185021	protein_coding	Wtap	utr5	ENSMUSG00000060475	ProperStrand	119	1	-3.6570
chr1	183848608	183949913	protein_coding	Enah	utr5	ENSMUSG00000022995	ProperStrand	196	chr18	35714145	35714255	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	4	-6.0408
chrX	166426989	166427021	protein_coding	Mid1	exon	ENSMUSG00000035299	ProperStrand	209	chr11	80415108	80415125	protein_coding	Myo1d	exon	ENSMUSG00000035441	ProperStrand	144	1	-9.0555
chr18	65960331	65960348	protein_coding	Sec11c	exon	ENSMUSG00000024516	ProperStrand	2	chr11	97698680	97698723	protein_coding	Lasp1	utr3	ENSMUSG00000038366	ProperStrand	65	1	-inf
chr5	122028376	122029634	protein_coding	Aldh2	exon	ENSMUSG00000029455	ProperStrand	108	chr11	62416600	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-4.0420
chr1	157160007	157160043	protein_coding	Xpr1	exon	ENSMUSG00000026469	ProperStrand	15	chr4	131908356	131908416	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.7937
chr3	152450608	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	chr2	130103751	130103809	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-4.0671
chr1	92689614	92689630	protein_coding	Col6a3	exon	ENSMUSG00000048126	ProperStrand	79	chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-7.3127
chr2	26277654	26277723	protein_coding	Sec16a	exon	ENSMUSG00000026924	ProperStrand	86	chr6	113383189	113383207	protein_coding	Cidec	exon	ENSMUSG00000030278	NonProperStrand	9	1	-16.4811
chr13	101506170	101508987	protein_coding	Mrps36	utr3	ENSMUSG00000061474	ProperStrand	5	chr7	117189957	117190047	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-8.3295
chr19	8800353	8800433	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	chr15	57978199	57978289	snoRNA	ENSMUSG00000080461_SNORA11	.	ENSMUSG00000080461	ProperStrand	171	1	-1.7384
chr11	94504724	94504824	protein_coding	Lrrc59	exon	ENSMUSG00000020869	ProperStrand	115	chr19	8800412	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-2.3781
chr16	91729698	91729723	protein_coding	Itsn1	utr5	ENSMUSG00000022957	ProperStrand	172	chr18	68179968	68179986	protein_coding	D18Ertd653e	intron	ENSMUSG00000024544	ProperStrand	16	1	-13.8877
chr17	47928467	47928485	protein_coding	Tfeb	exon	ENSMUSG00000023990	ProperStrand	78	chr11	6428065	6428156	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-7.0780
chr18	19654195	19654285	LINE	Lx2B	L1	chr18Lx2B19653712	NonProperStrand	1	chr15	72133986	72134076	Simple_repeat	(TTTC)n	Simple_repeat	chr15(TTTC)n72133966	ProperStrand	1	1	-inf
chr11	88785831	88785921	protein_coding	Scpep1	utr3	ENSMUSG00000000278	ProperStrand	54	chr14	76247711	76247752	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-4.3723
chr16	23110470	23110570	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	NonProperStrand	16	chr5	130300419	130300494	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	NonProperStrand	11	1	-18.9924
chr11	70465639	70465670	protein_coding	Pfn1	exon	ENSMUSG00000018293	ProperStrand	55	chr18	74938044	74938122	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	ProperStrand	1022	1	-7.8221
chr13	51775205	51775305	protein_coding	Secisbp2	exon	ENSMUSG00000035139	ProperStrand	19	chr17	12585979	12585995	protein_coding	Plg	exon	ENSMUSG00000059481	ProperStrand	86	1	-14.9299
chr3	96073991	96074022	protein_coding	Hist2h2bb	intron	ENSMUSG00000050936	ProperStrand	57	chr7	116664794	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.6374
chr11	116535951	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr2	112253681	112253789	protein_coding	2410042D21Rik	utr3	ENSMUSG00000027132	ProperStrand	10	1	-9.5406
chr2	166881666	166881682	protein_coding	Znfx1	exon	ENSMUSG00000039501	ProperStrand	32	chr4	131908688	131908771	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.1812
chr7	87857678	87857778	protein_coding	Iqgap1	utr3	ENSMUSG00000030536	ProperStrand	43	chr7	52382753	52382780	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-7.4156
chr7	20281833	20281895	protein_coding	Apoe	exon	ENSMUSG00000002985	ProperStrand	231	chr13	15569895	15569913	protein_coding	Gli3	exon	ENSMUSG00000021318	ProperStrand	54	1	-10.8225
chr2	4404742	4404759	protein_coding	Frmd4a	intron	ENSMUSG00000026657	ProperStrand	44	chr4	131865460	131865502	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-4.5926
chr18	34997722	34997762	protein_coding	Kdm3b	utr3	ENSMUSG00000038773	ProperStrand	80	chr4	131908689	131908797	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-4.2033
chr3	152450610	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-1.2792
chr14	35151956	35152056	protein_coding	Glud1	exon	ENSMUSG00000021794	ProperStrand	72	chr14	31827478	31827545	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-6.5832
chr5	138612970	138612986	protein_coding	Mcm7	utr5	ENSMUSG00000029730	ProperStrand	258	chr6	71832581	71832632	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-2.8723
chr13	74050741	74050781	protein_coding	Trip13	exon	ENSMUSG00000021569	ProperStrand	6	chr7	148634782	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	4	-inf
chr10	128157431	128157531	protein_coding	Dgka	utr3	ENSMUSG00000025357	ProperStrand	10	chr5	130300475	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-5.9242
chr11	44373551	44374967	protein_coding	Rnf145	exon	ENSMUSG00000019189	ProperStrand	46	chr1	63360458	63360476	protein_coding	Zdbf2	utr3	ENSMUSG00000027520	NonProperStrand	20	6	-inf
chr9	55309471	55312610	protein_coding	Etfa	exon	ENSMUSG00000032314	ProperStrand	20	chr7	29136557	29136647	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.3737
chr4	107087335	107087388	protein_coding	Tmem48	utr3	ENSMUSG00000028614	ProperStrand	42	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	4	-13.7451
chr10	79173104	79173393	protein_coding	Bsg	exon	ENSMUSG00000023175	ProperStrand	107	chr15	34370546	34370574	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-2.5181
chr14	57315519	57315978	protein_coding	Mphosph8	exon	ENSMUSG00000079184	ProperStrand	29	chr16	23110879	23110969	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0921
chr16	37017313	37017330	protein_coding	Polq	utr3	ENSMUSG00000034206	ProperStrand	7	chr8	112252314	112252342	protein_coding	Atxn1l	utr3	ENSMUSG00000069895	ProperStrand	13	1	-20.5261
chr9	40613208	40613238	protein_coding	Hspa8	utr3	ENSMUSG00000015656	ProperStrand	798	chr5	116071701	116071718	protein_coding	Gcn1l1	exon	ENSMUSG00000041638	ProperStrand	408	1	-4.3848
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr2	118687876	118687893	protein_coding	Ivd	exon	ENSMUSG00000027332	ProperStrand	5	1	-11.0331
chr9	65952735	65953335	protein_coding	Snx1	exon	ENSMUSG00000032382	ProperStrand	7	chr3	85944575	85944610	snoRNA	ENSMUSG00000064390_Rnu73b	.	ENSMUSG00000064390	ProperStrand	164	1	-15.7451
chr9	50816824	50816841	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	chr1	137271110	137271466	protein_coding	Shisa4	exon	ENSMUSG00000041889	ProperStrand	64	1	-11.6782
chr10	127728872	127728900	protein_coding	Stat2	utr3	ENSMUSG00000040033	ProperStrand	7	chr8	32260350	32260423	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-8.9777
chr3	95466466	95466556	protein_coding	Mcl1	utr3	ENSMUSG00000038612	ProperStrand	75	chr7	117189944	117190024	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.9308
chr2	84886868	84886977	protein_coding	Ssrp1	utr3	ENSMUSG00000027067	ProperStrand	118	chr9	108466988	108467010	protein_coding	Impdh2	exon	ENSMUSG00000062867	ProperStrand	74	1	-11.5333
chr3	134595367	134595385	protein_coding	Tacr3	exon	ENSMUSG00000028172	ProperStrand	1	chr5	120889875	120889892	protein_coding	Lhx5	intron	ENSMUSG00000029595	NonProperStrand	106	1	-inf
chr11	55318221	55318293	protein_coding	G3bp1	utr3	ENSMUSG00000018583	ProperStrand	106	chrX	71517851	71517951	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-5.4279
mmu-miR-6240	1	26	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr15	79908929	79909020	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	6	-2.2615
chr17	77813706	77813723	LTR	RLTR22_Mur	ERVK	chr17RLTR22_Mur77813705	ProperStrand	1	chr16	23110939	23110999	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr8	74843911	74843977	protein_coding	Klf2	exon	ENSMUSG00000055148	ProperStrand	82	chr5	77086888	77086904	protein_coding	Gm10430	exon	ENSMUSG00000072855	ProperStrand	11	1	-16.1480
chr11	43304774	43304790	protein_coding	C1qtnf2	exon	ENSMUSG00000046491	NonProperStrand	2	chr11	6428121	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-10.4671
chr10	80641540	80644723	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr12	106269283	106269444	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	8	-1.2342
chr19	5365832	5365932	protein_coding	Banf1	exon	ENSMUSG00000024844	ProperStrand	34	chr17	35299505	35299583	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-5.8871
chr7	109149271	109149287	protein_coding	Numa1	exon	ENSMUSG00000066306	NonProperStrand	171	chr4	131865380	131865439	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-2.1424
chr17	31793017	31793082	protein_coding	U2af1	intron	ENSMUSG00000061613	ProperStrand	17	chr5	74489610	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-6.2343
chr12	112783423	112783472	protein_coding	Eif5	utr3	ENSMUSG00000021282	ProperStrand	125	chr5	92718766	92718786	protein_coding	Sdad1	exon	ENSMUSG00000029415	ProperStrand	63	1	-11.7416
chr4	109598528	109608105	protein_coding	Faf1	exon	ENSMUSG00000010517	ProperStrand	29	chr11	55296310	55296332	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-7.6296
chr1	63225886	63226098	protein_coding	Eef1b2	exon	ENSMUSG00000025967	ProperStrand	106	chr9	64143736	64143826	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	2	-10.7175
chr2	63936034	63936053	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr1	88252838	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-1.6501
chr3	68826297	68826377	protein_coding	Smc4	exon	ENSMUSG00000034349	ProperStrand	21	chr5	108334243	108334333	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-6.8940
chr1	69624448	69624464	protein_coding	Ikzf2	exon	ENSMUSG00000025997	ProperStrand	11	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-11.1946
chr15	77754985	77755056	protein_coding	Txn2	exon	ENSMUSG00000005354	ProperStrand	82	chr14	69863109	69863126	protein_coding	Slc25a37	exon	ENSMUSG00000034248	NonProperStrand	6	1	-17.3732
chr1	169214941	169214968	protein_coding	Uck2	exon	ENSMUSG00000026558	ProperStrand	45	chr4	123170494	123171189	protein_coding	Macf1	exon	ENSMUSG00000028649	ProperStrand	320	1	-10.5383
chr5	65952377	65952395	protein_coding	Ube2k	intron	ENSMUSG00000029203	ProperStrand	289	chr17	24856620	24856720	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-3.4162
chr16	23111689	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	chr2	130101971	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	44	-2.1034
chr5	113673047	113673078	protein_coding	Sgsm1	utr3	ENSMUSG00000042216	ProperStrand	20	chr11	69483136	69483193	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-10.8563
chr5	35448325	35448342	protein_coding	Lrpap1	utr5	ENSMUSG00000029103	ProperStrand	43	chr11	6303283	6303336	protein_coding	Zmiz2	exon	ENSMUSG00000041164	ProperStrand	69	1	-13.7079
mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr6	88435849	88435865	protein_coding	Ruvbl1	exon	ENSMUSG00000030079	NonProperStrand	54	1	-6.1111
chrX	148306101	148306154	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	chr5	143142168	143142193	protein_coding	Wipi2	exon	ENSMUSG00000029578	ProperStrand	49	2	-15.0060
chr19	34999238	34999254	protein_coding	Kif20b	exon	ENSMUSG00000024795	NonProperStrand	28	chr16	23111757	23111777	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.2134
chr9	120038589	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	chr5	31190508	31190551	tRNA	tRNA109-TyrGTA	.	700424	ProperStrand	64	1	-2.9240
chr5	143666427	143666923	protein_coding	Actb	exon	ENSMUSG00000029580	ProperStrand	446	chr2	166622740	166622757	protein_coding	Trp53rk	utr3	ENSMUSG00000042854	ProperStrand	13	1	-12.4110
chr10	90579849	90579961	protein_coding	Slc25a3	exon	ENSMUSG00000061904	ProperStrand	74	chr4	131908689	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.9524
chr19	57435752	57435769	protein_coding	Fam160b1	utr5	ENSMUSG00000033478	ProperStrand	49	chr19	8963035	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.6199
chr7	55989418	55989508	LINE	L1_Mur2	L1	chr7L1_Mur255987718	ProperStrand	1	chr14	34780877	34780957	protein_coding	Zfp488	utr3	ENSMUSG00000044519	ProperStrand	54	1	-inf
chr5	142633046	142633063	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	chr5	108334193	108334260	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-2.3658
chr13	91936498	91936526	protein_coding	Zcchc9	utr3	ENSMUSG00000021621	ProperStrand	1	chr3	68889148	68889190	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-inf
chr17	57040645	57040701	protein_coding	Mllt1	intron	ENSMUSG00000024212	ProperStrand	19	chr11	106362337	106362380	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	4	-inf
chr9	78327504	78327548	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr6	39472677	39472777	protein_coding	Dennd2a	exon	ENSMUSG00000038456	ProperStrand	13	1	-9.4244
chr18	21458350	21458421	protein_coding	Fam59a	utr5	ENSMUSG00000042680	ProperStrand	9	chr16	23110909	23110999	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.9939
chr2	158185530	158185620	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr13	49779667	49779747	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-0.9555
chr2	26493410	26493518	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr9	30235085	30235104	protein_coding	Snx19	exon	ENSMUSG00000031993	ProperStrand	353	6	-15.5890
chr11	53075166	53075256	protein_coding	Hspa4	exon	ENSMUSG00000020361	ProperStrand	69	chr4	131865426	131865506	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-3.7407
chr8	13879701	13879805	protein_coding	Zfp828	exon	ENSMUSG00000047710	ProperStrand	32	chr8	73419657	73419689	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.3013
chr3	28982531	28982547	protein_coding	Egfem1	intron	ENSMUSG00000063600	ProperStrand	7	chr19	8798484	8798553	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-9.5818
chr18	67807888	67808460	protein_coding	Psmg2	exon	ENSMUSG00000024537	ProperStrand	13	chr7	105963947	105963998	tRNA	tRNA441-ProTGG	.	1161538	ProperStrand	6	2	-19.7152
chr2	167434543	167434633	protein_coding	Gm20431	utr3	ENSMUSG00000089739	ProperStrand	81	chr15	79908955	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-4.8900
chr11	67746124	67746143	lincRNA	9130017K11Rik	intron	ENSMUSG00000055134	ProperStrand	3	chr4	131908356	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-inf
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr10	80809668	80809684	protein_coding	Hmg20b	exon	ENSMUSG00000020232	ProperStrand	157	1	-5.8923
chr14	32521322	32522010	protein_coding	Ankrd28	exon	ENSMUSG00000014496	ProperStrand	39	chr1	162967512	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.2823
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr7	117189948	117190038	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	4	-4.7225
chr4	126703230	126703411	protein_coding	Sfpq	exon	ENSMUSG00000028820	ProperStrand	340	chr18	74938234	74938314	snoRNA	ENSMUSG00000089235_SCARNA17	.	ENSMUSG00000089235	ProperStrand	1128	1	-4.0768
chr8	69036718	69036734	protein_coding	Tktl2	exon	ENSMUSG00000025519	ProperStrand	2	chr9	41845217	41845275	protein_coding	Sorl1	exon	ENSMUSG00000049313	ProperStrand	112	1	-inf
chr3	34615497	34615570	LTR	MTB_Mm	MaLR	chr3MTB_Mm34615397	ProperStrand	1	chr14	48879447	48879463	protein_coding	Peli2	utr3	ENSMUSG00000021846	ProperStrand	9	1	-inf
chr15	79909165	79913350	protein_coding	Rpl3	exon	ENSMUSG00000060036	ProperStrand	8342	chr9	64022854	64022922	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	12	-9.2147
chr5	74489202	74489290	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr7	53493835	53493851	protein_coding	Ush1c	utr5	ENSMUSG00000030838	NonProperStrand	62	3	-12.9269
chr9	15130707	15131005	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	chr9	120037948	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	3	-3.6666
chr17	9142526	9142543	protein_coding	Pde10a	intron	ENSMUSG00000023868	NonProperStrand	78	chr8	44381699	44381771	protein_coding	Zfp42	exon	ENSMUSG00000051176	ProperStrand	127	1	-11.2804
chr18	60762105	60762121	protein_coding	Synpo	exon	ENSMUSG00000043079	NonProperStrand	8	chr13	23837078	23837129	protein_coding	Hist1h3c	exon	ENSMUSG00000069310	ProperStrand	26	2	-19.9312
chr12	99453916	99453964	protein_coding	Galc	intron	ENSMUSG00000021003	ProperStrand	4	chr1	162965539	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-14.4538
chr13	40638353	40638443	LTR	BGLII	ERVK	chr13BGLII40638098	ProperStrand	1	chr13	40638508	40638598	LTR	MER70B	ERVL	chr13MER70B40638503	NonProperStrand	1	1	-inf
chr13	98225975	98226022	lincRNA	Gm11019	intron	ENSMUSG00000078952	NonProperStrand	10	chr7	74378255	74378272	protein_coding	Mef2a	utr3	ENSMUSG00000030557	ProperStrand	18	1	-19.1178
chr1	77380158	77384433	protein_coding	Epha4	exon	ENSMUSG00000026235	ProperStrand	57	chr15	79913315	79913336	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-3.6873
chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	chr7	121186578	121186594	protein_coding	Spon1	utr3	ENSMUSG00000038156	ProperStrand	6	1	-13.9657
chr13	95811887	95811903	protein_coding	Pde8b	exon	ENSMUSG00000021684	NonProperStrand	13	chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	1	-13.7328
chr9	67194377	67195973	protein_coding	Tln2	exon	ENSMUSG00000052698	ProperStrand	79	chr5	144180509	144180589	protein_coding	Kdelr2	exon	ENSMUSG00000079111	ProperStrand	25	9	-19.3327
chr13	69762137	69762153	protein_coding	Nsun2	exon	ENSMUSG00000021595	ProperStrand	110	chr10	23505152	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-1.1571
chr7	140182194	140182774	protein_coding	Ctbp2	exon	ENSMUSG00000030970	ProperStrand	89	chr4	131908809	131908865	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.7386
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr5	111121151	111121200	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-1.5791
chr9	120859819	120860014	protein_coding	Ctnnb1	exon	ENSMUSG00000006932	ProperStrand	214	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-4.4461
chr14	56365054	56365144	protein_coding	2610027L16Rik	exon	ENSMUSG00000019297	ProperStrand	43	chr2	26493398	26493485	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	33	-inf
chr8	13369534	13370503	protein_coding	Tfdp1	exon	ENSMUSG00000038482	ProperStrand	19	chr11	6428035	6428119	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.3857
chr13	44998272	44998290	protein_coding	Jarid2	exon	ENSMUSG00000038518	NonProperStrand	13	chr11	33061199	33061555	protein_coding	Npm1	exon	ENSMUSG00000057113	ProperStrand	352	2	-19.9573
chr11	68847420	68847472	protein_coding-noncoding	1500010J02Rik	utr5	ENSMUSG00000020898	ProperStrand	2	chr1	59539683	59539700	protein_coding	Fzd7	utr5	ENSMUSG00000041075	ProperStrand	373	1	-17.1543
chr12	114290175	114290191	protein_coding	Pacs2	intron	ENSMUSG00000021143	NonProperStrand	302	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-8.4510
chr14	30781615	30781706	protein_coding	Selk	utr5	ENSMUSG00000042682	ProperStrand	16	chr17	24857069	24857251	protein_coding	Rps2	utr5	ENSMUSG00000044533	ProperStrand	373	8	-21.3996
chr2	158182156	158182281	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	chr11	74718931	74718962	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	8	-13.4794
chr8	123973825	123973842	protein_coding	Gm20388	intron	ENSMUSG00000092329	ProperStrand	295	chr9	15118310	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-0.9364
chr11	52868245	52868262	protein_coding	Fstl4	intron	ENSMUSG00000036264	NonProperStrand	8	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-14.5613
chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	chr5	147106292	147106309	protein_coding	Cdk8	intron	ENSMUSG00000029635	ProperStrand	19	1	-11.6005
chr4	47409336	47409436	protein_coding	Tgfbr1	exon	ENSMUSG00000007613	ProperStrand	22	chr1	88247743	88247834	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	7	-inf
mmu-miR-6238	1	19	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr11	97642952	97643072	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	5	-4.2819
chr17	86535599	86535626	protein_coding	Srbd1	exon	ENSMUSG00000024135	ProperStrand	16	chr5	135859576	135859747	protein_coding	Pom121	exon	ENSMUSG00000053293	ProperStrand	127	2	-inf
chr5	121655807	121655856	protein_coding	Rpl6	exon	ENSMUSG00000029614	ProperStrand	332	chr11	68887046	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	3	-3.7974
chr5	108228164	108228264	protein_coding	Evi5	exon	ENSMUSG00000011831	ProperStrand	18	chr17	24857741	24857794	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.5014
chr14	31381500	31382175	protein_coding	Tkt	exon	ENSMUSG00000021957	ProperStrand	160	chr9	64333078	64333098	protein_coding	Megf11	intron	ENSMUSG00000036466	NonProperStrand	64	1	-11.2151
chr16	57391761	57391792	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr1	133252344	133252448	protein_coding	Srgap2	intron	ENSMUSG00000026425	ProperStrand	299	3	-11.0211
chr16	23317712	23321120	protein_coding	St6gal1	utr5	ENSMUSG00000022885	ProperStrand	5	chr4	131865377	131865477	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-9.0535
chr19	8798523	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	chr7	16524109	16524160	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	2	-3.5442
chr7	52573528	52573786	protein_coding	Trpm4	exon	ENSMUSG00000038260	ProperStrand	161	chr10	90581059	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-2.9705
chr8	108414909	108414938	protein_coding	Edc4	exon	ENSMUSG00000036270	ProperStrand	34	chr4	99408268	99408284	protein_coding	Alg6	exon	ENSMUSG00000073792	NonProperStrand	3	1	-21.0165
chr14	66539969	66539985	protein_coding	Scara3	exon	ENSMUSG00000034463	ProperStrand	8	chr19	8963153	8963182	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-6.1145
chr18	60623228	60623318	LTR	RLTR26	ERVK	chr18RLTR2660623096	NonProperStrand	1	chr18	60622960	60623040	SINE	RSINE1	B4	chr18RSINE160622957	ProperStrand	1	1	-inf
chr5	38884523	38884594	protein_coding	Slc2a9	intron	ENSMUSG00000005107	NonProperStrand	3	chr7	116664852	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-8.6415
chr9	43921925	43921942	lincRNA	Gm3906	intron	ENSMUSG00000092003	NonProperStrand	41	chr3	153575106	153575168	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	1	-9.2604
chr2	129998643	129998664	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr15	101915221	101916472	protein_coding	Eif4b	exon	ENSMUSG00000058655	ProperStrand	484	1	-4.0353
chr5	138258721	138259088	protein_coding	Zcwpw1	exon	ENSMUSG00000037108	ProperStrand	5	chr2	3421908	3421924	protein_coding	Hspa14	utr3	ENSMUSG00000079615	ProperStrand	14	1	-inf
chr14	34207789	34207851	protein_coding	Mapk8	intron	ENSMUSG00000021936	ProperStrand	2	chr10	23505152	23505176	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-8.0476
chr2	132089145	132089161	protein_coding	Cds2	utr5	ENSMUSG00000058793	NonProperStrand	16	chr7	116663713	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-8.2861
chr19	21797619	21797637	LINE	L1MDa	L1	chr19L1MDa21797204	ProperStrand	2	chr9	64143809	64143877	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	2	-inf
chr11	116535486	116535534	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr1	187198038	187202700	protein_coding	Eprs	exon	ENSMUSG00000026615	ProperStrand	149	1	-4.1558
chr3	133151599	133151670	protein_coding	Tet2	utr5	ENSMUSG00000040943	ProperStrand	192	chr12	77066968	77066984	protein_coding	Syne2	exon	ENSMUSG00000063450	ProperStrand	63	1	-10.8820
chr10	10673954	10673971	protein_coding	Grm1	intron	ENSMUSG00000019828	ProperStrand	38	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-9.5117
chr17	75049853	75049953	protein_coding	Birc6	intron	ENSMUSG00000024073	ProperStrand	110	chr19	8798764	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-3.6550
chr19	6058280	6058320	protein_coding	Fau	exon	ENSMUSG00000038274	ProperStrand	64	chr1	39605591	39605697	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	7	-inf
chr4	141034210	141034226	protein_coding	Spen	exon	ENSMUSG00000040761	ProperStrand	161	chr10	23506324	23506347	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-5.0127
chr5	131783331	131783347	protein_coding	Wbscr17	utr5	ENSMUSG00000034040	NonProperStrand	11	chr19	8963087	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.4574
chr17	7932179	7933533	protein_coding	Fndc1	exon	ENSMUSG00000071984	NonProperStrand	6	chr14	76247711	76247768	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-8.8306
chr3	93630080	93630096	protein_coding	Tdpoz3	exon	ENSMUSG00000058005	ProperStrand	2	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-15.2057
chr16	23110454	23110530	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	chr1	173041632	173041649	tRNA	tRNA710-ValCAC	.	1341921	ProperStrand	206	2	-1.4526
chr12	73922987	73923004	LTR	RMER5	ERV1	chr12RMER573922948	NonProperStrand	24	chr5	151755616	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-9.5860
chr6	64466233	64466254	protein_coding	Grid2	intron	ENSMUSG00000071424	ProperStrand	20	chr11	101184001	101184045	protein_coding	Psme3	utr3	ENSMUSG00000078652	ProperStrand	17	1	-18.1527
chr5	140811325	140811354	protein_coding	Nudt1	exon	ENSMUSG00000036639	ProperStrand	6	chr4	116826700	116826766	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	2	-18.0472
chr7	148444077	148444133	protein_coding	Phrf1	exon	ENSMUSG00000038611	ProperStrand	86	chr2	26494708	26494800	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.4757
chr7	3605787	3607279	protein_coding	Cnot3	exon	ENSMUSG00000035632	ProperStrand	55	chr14	31827516	31827549	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	4	-18.9664
chr2	90235313	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	27487449	27487466	protein_coding	Grm8	intron	ENSMUSG00000024211	ProperStrand	15	1	-7.2074
chr11	97547369	97547413	protein_coding	Cisd3	utr5	ENSMUSG00000078695	ProperStrand	4	chr7	29136611	29136654	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-18.6525
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr14	31827478	31827545	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	3	-4.1577
chr9	122932305	122932322	protein_coding	Tmem42	utr3	ENSMUSG00000066233	ProperStrand	2	chr16	23111435	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-8.0851
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chrX	99445995	99446012	protein_coding	Cited1	utr5	ENSMUSG00000051159	ProperStrand	72	1	-11.0036
chr16	22572859	22572876	protein_coding	Dgkg	intron	ENSMUSG00000022861	NonProperStrand	39	chr11	6428087	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.9898
chr10	60887271	60887300	protein_coding	Nodal	exon	ENSMUSG00000037171	ProperStrand	30	chr16	23111373	23111447	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.3326
chr1	154708822	154725177	protein_coding	Smg7	exon	ENSMUSG00000042772	ProperStrand	88	chr17	24857737	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	4	-6.7231
chr9	35369464	35369480	protein_coding	Hyls1	exon	ENSMUSG00000050555	ProperStrand	4	chr4	131908689	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-10.6778
chr6	92192497	92192518	protein_coding	Trh	utr3	ENSMUSG00000005892	ProperStrand	87	chr16	23111392	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-1.6250
chr5	123622050	123622066	protein_coding	Hpd	exon	ENSMUSG00000029445	ProperStrand	254	chr2	32818803	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-2.7732
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr10	110927523	110927651	protein_coding	Nap1l1	intron	ENSMUSG00000058799	ProperStrand	185	1	-7.1243
chr11	120433977	120434023	protein_coding	P4hb	exon	ENSMUSG00000025130	ProperStrand	83	chr16	15904328	15904344	protein_coding	2310008H04Rik	exon	ENSMUSG00000041974	ProperStrand	30	1	-14.0600
chr5	130009930	130009968	protein_coding	Sfswap	exon	ENSMUSG00000029439	ProperStrand	34	chr3	126066823	126066840	protein_coding	Arsj	utr5	ENSMUSG00000046561	ProperStrand	3	1	-21.0165
chr18	75454886	75454940	LTR	MLT1B-int	MaLR	chr18MLT1B-int75454830	ProperStrand	1	chr16	17914644	17914661	protein_coding	Gsc2	exon	ENSMUSG00000022738	ProperStrand	2	1	-inf
chr1	88426783	88426829	protein_coding	Ptma	utr3	ENSMUSG00000026238	ProperStrand	385	chr12	106269365	106269445	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-1.0571
chr4	56910551	56910618	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	chr16	38158179	38158226	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	1	-1.8423
chr16	37777391	37777408	protein_coding	Fstl1	exon	ENSMUSG00000022816	ProperStrand	179	chr11	69481333	69481433	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-1.4024
chr7	35983752	35983768	protein_coding	Slc7a10	exon	ENSMUSG00000030495	NonProperStrand	33	chr5	74489596	74489644	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-4.9189
chr3	155715360	155715382	LINE	Lx4A	L1	chr3Lx4A155714407	NonProperStrand	9	chr19	8963026	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.8692
chr11	83579615	83580628	protein_coding	Heatr6	exon	ENSMUSG00000000976	ProperStrand	67	chr17	56755384	56755400	protein_coding	Lonp1	exon	ENSMUSG00000041168	NonProperStrand	10	3	-19.7251
chr12	8974576	8974656	protein_coding	Matn3	intron	ENSMUSG00000020583	ProperStrand	3	chr9	88244103	88244193	protein_coding	Nt5e	intron	ENSMUSG00000032420	NonProperStrand	4	1	-inf
chr10	25161719	25161787	protein_coding	Epb4.1l2	utr5	ENSMUSG00000019978	ProperStrand	105	chr1	63225674	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-5.5673
chr7	87537850	87538374	protein_coding	Furin	exon	ENSMUSG00000030530	ProperStrand	22	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-7.8713
chr18	37911790	37911806	protein_coding	Pcdhga9	intron	ENSMUSG00000023036	ProperStrand	245	chr10	67010983	67011031	protein_coding	Ado	exon	ENSMUSG00000057134	ProperStrand	7	1	-14.9273
chr11	69730368	69730433	protein_coding	Eif5a	utr3	ENSMUSG00000078812	ProperStrand	164	chr4	131866226	131866280	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-1.9180
chr5	150517692	150517792	protein_coding	B3galtl	intron	ENSMUSG00000051950	ProperStrand	29	chr6	113669127	113669150	protein_coding	Ghrl	exon	ENSMUSG00000064177	NonProperStrand	3	3	-inf
chr4	118808462	118808504	protein_coding	Slc2a1	exon	ENSMUSG00000028645	ProperStrand	361	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-4.6365
chr16	17307872	17307888	protein_coding	Pi4ka	exon	ENSMUSG00000041720	ProperStrand	39	chr19	8800355	8800445	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-4.3397
chr10	119521985	119526467	protein_coding	Helb	exon	ENSMUSG00000020228	ProperStrand	41	chr12	79986147	79986188	protein_coding	Eif2s1	utr3	ENSMUSG00000021116	ProperStrand	11	1	-17.5653
chr7	51568096	51568112	protein_coding	Shank1	exon	ENSMUSG00000038738	ProperStrand	6	chr19	8798740	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-9.4911
chr19	37624911	37624939	protein_coding	Exoc6	utr5	ENSMUSG00000053799	ProperStrand	9	chrX	34622906	34623018	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	3	-16.0779
chr9	90165371	90165461	protein_coding	Tbc1d2b	exon	ENSMUSG00000037410	ProperStrand	5	chr11	68886938	68887018	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-9.2042
chr2	130103751	130103795	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	chr8	32260335	32260422	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-0.7031
chr3	130813862	130813906	protein_coding	Lef1	utr5	ENSMUSG00000027985	ProperStrand	9	chr19	8799598	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-10.6341
chr8	108233711	108233729	protein_coding	4933405L10Rik	exon	ENSMUSG00000013158	ProperStrand	94	chr17	13112510	13112585	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	2	-6.3080
chr2	109811567	109811612	protein_coding	Lgr4	intron	ENSMUSG00000050199	ProperStrand	27	chr4	131908809	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.4692
chr7	140182733	140182777	protein_coding	Ctbp2	exon	ENSMUSG00000030970	ProperStrand	89	chr10	23505152	23505174	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-0.7462
chr10	18245262	18245353	protein_coding	Nhsl1	exon	ENSMUSG00000039835	ProperStrand	18	chr4	131908753	131908795	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-5.5487
chrX	133270145	133274407	protein_coding	Morf4l2	utr5	ENSMUSG00000031422	ProperStrand	113	chr6	67231786	67233958	protein_coding	Serbp1	utr3	ENSMUSG00000036371	ProperStrand	261	10	-inf
chr12	112338186	112351875	protein_coding	Rcor1	exon	ENSMUSG00000037896	ProperStrand	20	chr16	23110839	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-4.8132
chr17	66199267	66199334	protein_coding	Ralbp1	utr3	ENSMUSG00000024096	ProperStrand	39	chr7	117189863	117189922	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-7.0649
chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-0.7295
chr7	133942728	133942745	protein_coding	Aldoa	utr5	ENSMUSG00000030695	ProperStrand	721	chr9	105546700	105546717	protein_coding	Pik3r4	exon	ENSMUSG00000032571	ProperStrand	49	1	-8.7467
chr8	91552181	91552271	protein_coding	Sall1	utr3	ENSMUSG00000031665	ProperStrand	96	chr15	34370562	34370642	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-2.7052
chr3	121718705	121718722	protein_coding	Arhgap29	utr3	ENSMUSG00000039831	NonProperStrand	6	chr19	8963032	8963083	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-6.7266
chr14	51427120	51427192	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr7	36557736	36557758	protein_coding	Zfp507	utr3	ENSMUSG00000044452	ProperStrand	66	3	-15.8842
chr10	66437046	66437063	SINE	B1_Mur3	Alu	chr10B1_Mur366437003	ProperStrand	10	chr5	116314941	116314959	protein_coding	Cit	intron	ENSMUSG00000029516	ProperStrand	45	1	-17.6678
chr9	57393160	57393205	protein_coding	Mpi	exon	ENSMUSG00000032306	ProperStrand	8	chr7	151348785	151348805	protein_coding	Shank2	intron	ENSMUSG00000037541	ProperStrand	11	1	-18.8752
chr5	35167041	35167473	protein_coding	Htt	exon	ENSMUSG00000029104	ProperStrand	73	chr11	69481341	69481431	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-4.9532
chr11	49502805	49502830	protein_coding	Cnot6	exon	ENSMUSG00000020362	ProperStrand	18	chr9	15119648	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.8766
chr2	76471660	76471676	protein_coding	Prkra	exon	ENSMUSG00000002731	NonProperStrand	65	chr19	30177490	30177539	protein_coding	Gldc	exon	ENSMUSG00000024827	ProperStrand	175	1	-11.0044
chr3	19999914	20005665	protein_coding	Hltf	exon	ENSMUSG00000002428	ProperStrand	24	chr1	162967129	162967178	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	4	-20.8449
chr1	178754159	178754175	protein_coding	Sdccag8	intron	ENSMUSG00000026504	ProperStrand	54	chr6	72388906	72388922	protein_coding	Mat2a	intron	ENSMUSG00000053907	ProperStrand	51	1	-13.8573
chr11	115177157	115177173	protein_coding	Ush1g	utr3	ENSMUSG00000045288	ProperStrand	4	chr10	83990088	83990188	protein_coding	Ckap4	utr3	ENSMUSG00000046841	ProperStrand	60	1	-19.5074
chr16	23111807	23111837	protein_coding	Eif4a2	intron	ENSMUSG00000022884	ProperStrand	356	chr14	76247742	76247842	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-1.1811
chr17	43766565	43766581	protein_coding	Tdrd6	exon	ENSMUSG00000040140	NonProperStrand	15	chr16	23110888	23110940	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.0842
chr17	15836325	15836341	LTR	MTE2a	MaLR	chr17MTE2a15836248	NonProperStrand	1	chr19	5652703	5652734	protein_coding	Sipa1	exon	ENSMUSG00000056917	ProperStrand	14	1	-inf
chr15	78798597	78798614	protein_coding	Triobp	exon	ENSMUSG00000033088	NonProperStrand	6	chr4	131865867	131865902	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-6.1051
chr9	78046175	78056979	protein_coding	Gsta4	exon	ENSMUSG00000032348	ProperStrand	82	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	4	-9.6051
chr8	126867217	126867279	protein_coding	Gm20388	exon	ENSMUSG00000092329	ProperStrand	295	chr17	35087897	35087915	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	3	-6.0903
chr1	182260246	182260262	protein_coding	Gm5069	intron	ENSMUSG00000055676	ProperStrand	3	chr14	33005139	33005236	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-10.2437
chr3	104607203	104607303	protein_coding	Mov10	exon	ENSMUSG00000002227	ProperStrand	96	chr18	73693111	73693138	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-4.6145
chr4	155215263	155215280	protein_coding	Mxra8	exon	ENSMUSG00000029070	NonProperStrand	3	chr3	106909227	106909243	protein_coding	Kcna2	utr3	ENSMUSG00000040724	ProperStrand	17	1	-inf
chr11	69042403	69042483	protein_coding	Gucy2e	intron	ENSMUSG00000020890	NonProperStrand	99	chr18	33961610	33961700	protein_coding	Epb4.1l4a	intron	ENSMUSG00000024376	NonProperStrand	6	1	-17.0583
chr7	52708431	52708448	protein_coding	Gys1	intron	ENSMUSG00000003865	ProperStrand	28	chr4	131865853	131865917	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.0580
chr4	134878385	134878404	protein_coding	Srrm1	exon	ENSMUSG00000028809	NonProperStrand	25	chr7	148634701	148634788	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-5.6811
chr19	46405219	46405248	protein_coding	Cuedc2	exon	ENSMUSG00000036748	ProperStrand	12	chr9	15118323	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-10.7922
chr2	31924012	31924028	protein_coding	Fam78a	utr3	ENSMUSG00000050592	NonProperStrand	340	chr15	82980190	82980225	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-3.7813
chr7	52713968	52714023	protein_coding	Ftl1	exon	ENSMUSG00000050708	ProperStrand	807	chr1	63225657	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	2	-3.3965
chr11	120148960	120148976	protein_coding	Bahcc1	exon	ENSMUSG00000039741	NonProperStrand	268	chr6	71832629	71832685	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-2.8056
chr7	37384310	37384327	LTR	ORR1E	MaLR	chr7ORR1E37384234	NonProperStrand	30	chr16	23111447	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.3326
chr13	17790078	17790143	protein_coding	2810021B07Rik	utr3	ENSMUSG00000012429	ProperStrand	3	chr11	69483190	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-8.5256
chr5	135853499	135853541	protein_coding	Pom121	utr3	ENSMUSG00000053293	ProperStrand	127	chr15	79908929	79908954	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-4.0341
chr11	90202076	90202092	protein_coding	Hlf	exon	ENSMUSG00000003949	NonProperStrand	25	chr18	35714262	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-5.1110
chr11	107442811	107442828	protein_coding	Helz	intron	ENSMUSG00000020721	ProperStrand	60	chr15	76174108	76174763	protein_coding	Cyc1	exon	ENSMUSG00000022551	ProperStrand	47	1	-13.8099
chr5	106241068	106241158	protein_coding	Lrrc8d	exon	ENSMUSG00000046079	ProperStrand	40	chr4	131866155	131866235	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-4.4305
chr8	74058572	74059873	protein_coding	Bst2	utr3	ENSMUSG00000046718	ProperStrand	15	chr16	23110864	23110989	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-10.9588
chr15	79913288	79913346	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr9	64023228	64023287	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	4	-1.7574
chr10	24359540	24359558	protein_coding	Enpp1	utr3	ENSMUSG00000037370	ProperStrand	13	chr5	74489564	74489653	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	12	-inf
chrX	71197931	71197961	protein_coding	Hcfc1	exon	ENSMUSG00000031386	ProperStrand	424	chr4	122970477	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-3.6309
chr7	13516174	13516194	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr11	62418045	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-1.4323
chr15	82980082	82980227	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr16	23110828	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	66	-3.0227
chr5	97516227	97516347	protein_coding	Paqr3	utr3	ENSMUSG00000055725	ProperStrand	10	chr11	106362337	106362378	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-9.4709
chr1	88252836	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	chr19	8800356	8800465	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	10	-1.9593
chr15	103183679	103184008	protein_coding	Itga5	exon	ENSMUSG00000000555	ProperStrand	28	chr15	103043535	103043615	protein_coding	Cbx5	exon	ENSMUSG00000009575	ProperStrand	98	1	-13.8697
chr15	25718834	25718924	protein_coding	Myo10	intron	ENSMUSG00000022272	ProperStrand	168	chr18	35714145	35714225	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-1.6927
chr15	99525180	99525270	protein_coding	Accn2	exon	ENSMUSG00000023017	ProperStrand	3	chr4	131865413	131865493	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-10.2531
chr4	148582025	148584151	protein_coding	Kif1b	exon	ENSMUSG00000063077	ProperStrand	60	chr7	148634713	148634803	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-3.9861
chr6	58883865	58883881	protein_coding	Fam13a	utr3	ENSMUSG00000037709	NonProperStrand	1	chr9	120039533	120039557	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-inf
chr14	46082413	46082431	protein_coding	Fermt2	intron	ENSMUSG00000037712	NonProperStrand	5	chr2	26494763	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-8.0805
chr9	81949795	81949813	protein_coding	Mei4	intron	ENSMUSG00000043289	NonProperStrand	42	chr10	23505152	23505218	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.7547
chr5	130321518	130321647	protein_coding	Cct6a	exon	ENSMUSG00000029447	ProperStrand	128	chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	1	-7.9739
chr4	133421681	133421724	protein_coding	Rps6ka1	exon	ENSMUSG00000003644	ProperStrand	68	chr4	116827015	116827276	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	2	-15.8972
chr7	54110508	54110584	protein_coding	Ldha	utr3	ENSMUSG00000063229	ProperStrand	280	chr1	9932550	9932609	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-4.7085
chr4	43042934	43042965	protein_coding	Stoml2	exon	ENSMUSG00000028455	ProperStrand	8	chr16	23111436	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.8232
chr7	54442924	54442967	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	chr19	8798740	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	2	-3.0289
chr2	90235292	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr13	38754958	38754976	protein_coding	Gm17729	intron	ENSMUSG00000090804	NonProperStrand	1	1	-inf
chr10	114727059	114727101	protein_coding	Rab21	utr3	ENSMUSG00000020132	ProperStrand	8	chr11	4820972	4820990	protein_coding	Thoc5	intron	ENSMUSG00000034274	ProperStrand	325	1	-14.0643
chr4	101092453	101092470	protein_coding	Ak4	exon	ENSMUSG00000028527	NonProperStrand	1	chr7	67123693	67123729	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	1	-inf
chr9	35018942	35023358	protein_coding	Srpr	exon	ENSMUSG00000032042	ProperStrand	54	chr16	23110903	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-5.0497
chr3	145555063	145555144	protein_coding	Ddah1	utr3	ENSMUSG00000028194	ProperStrand	4	chr11	116938557	116938647	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-11.8047
chr1	74481574	74481591	protein_coding	Vil1	utr3	ENSMUSG00000026175	ProperStrand	68	chr9	20837652	20837669	protein_coding	Icam5	exon	ENSMUSG00000032174	NonProperStrand	6	1	-17.5255
chr8	12429957	12429976	protein_coding	Gm5607	exon	ENSMUSG00000047935	NonProperStrand	7	chr16	23110883	23110973	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.4785
chr16	32615283	32615363	protein_coding	Tfrc	exon	ENSMUSG00000022797	ProperStrand	71	chr18	35716813	35716884	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.8974
chr12	27826832	27826932	protein_coding	Gm9866	exon	ENSMUSG00000052076	ProperStrand	1	chr9	15118324	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-inf
chrX	98640080	98641468	protein_coding	Nono	exon	ENSMUSG00000031311	ProperStrand	102	chr1	162967530	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-2.5303
chr1	134465558	134465574	protein_coding	Nfasc	utr3	ENSMUSG00000026442	NonProperStrand	48	chr10	23505152	23505204	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.5517
chr5	121655016	121655098	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	chr8	18933070	18933093	snoRNA	ENSMUSG00000088420_SNORA70	.	ENSMUSG00000088420	ProperStrand	12	1	-6.9120
chr7	114212986	114213010	LINE	Lx4A	L1	chr7Lx4A114212851	NonProperStrand	2	chr14	32479927	32479943	protein_coding	Btd	exon	ENSMUSG00000021900	NonProperStrand	74	1	-inf
chr9	20716411	20716665	protein_coding	Dnmt1	exon	ENSMUSG00000004099	ProperStrand	91	chr4	131865411	131865491	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	4	-10.9644
chrX	105459667	105459747	LINE	L1Md_A	L1	chrXL1Md_A105456534	ProperStrand	1	chr2	106232803	106232893	protein_coding	Dcdc5	intron	ENSMUSG00000074981	NonProperStrand	7	1	-inf
chr8	41685891	41685910	protein_coding	Mtmr7	intron	ENSMUSG00000039431	ProperStrand	40	chr10	23505152	23505218	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.8310
chr1	46132859	46132916	protein_coding	Dnahc7b	intron	ENSMUSG00000041144	NonProperStrand	57	chr15	34370545	34370636	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-3.6440
chr17	10431851	10466861	protein_coding	Qk	exon	ENSMUSG00000062078	ProperStrand	63	chr1	162965981	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-3.5132
chr4	132530097	132530117	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	chrX	71517822	71517960	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-3.0179
chr5	123622050	123622066	protein_coding	Hpd	exon	ENSMUSG00000029445	ProperStrand	254	chr7	52381719	52381761	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-4.7451
chr7	87410157	87410174	protein_coding	Ngrn	utr3	ENSMUSG00000047084	ProperStrand	9	chr9	120038565	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-6.7394
chr10	40079395	40079412	protein_coding	Cdk19	intron	ENSMUSG00000038481	ProperStrand	34	chr16	23110960	23110988	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.8174
chr9	85220675	85220691	protein_coding	Fam46a	utr5	ENSMUSG00000032265	NonProperStrand	21	chr11	69481361	69481432	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.1963
chr17	57487714	57487731	SINE	B3A	B2	chr17B3A57487644	ProperStrand	5	chr7	29136551	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-11.9866
chr12	114308351	114308441	protein_coding	Pacs2	exon	ENSMUSG00000021143	ProperStrand	14	chr3	88497853	88497933	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-10.4102
chr3	151751458	151751477	SINE	RSINE1	B4	chr3RSINE1151751222	ProperStrand	11	chr4	149622665	149622736	protein_coding	Eno1	utr3	ENSMUSG00000063524	ProperStrand	432	1	-12.8236
chr11	60536145	60536217	protein_coding	Flii	exon	ENSMUSG00000002812	ProperStrand	42	chr1	58585304	58585328	protein_coding	Fam126b	utr3	ENSMUSG00000038174	ProperStrand	9	2	-19.9825
chr3	88490277	88516142	protein_coding	2810403A07Rik	utr3	ENSMUSG00000028060	ProperStrand	22	chr16	23110967	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-6.3713
chr10	126719397	126719487	protein_coding	Mbd6	utr3	ENSMUSG00000025409	ProperStrand	12	chr8	129468785	129468865	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	2	-12.3043
chr9	60708951	60711229	protein_coding	Uaca	exon	ENSMUSG00000034485	ProperStrand	109	chr8	129468746	129468848	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	3	-8.2726
chr3	146433516	146433532	protein_coding	Prkacb	utr5	ENSMUSG00000005034	ProperStrand	15	chr2	32818817	32818882	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-8.2480
chr9	108411496	108411794	protein_coding	Qars	exon	ENSMUSG00000032604	ProperStrand	16	chr16	23111413	23111503	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.4608
chr4	109654443	109654461	protein_coding	Dmrta2	exon	ENSMUSG00000047143	ProperStrand	1	chr7	116663664	116663713	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-inf
chr13	54848608	54848624	protein_coding	Gprin1	intron	ENSMUSG00000069227	ProperStrand	55	chr5	115939535	115939560	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-8.0393
chr7	150700469	150706295	protein_coding	Nap1l4	utr3	ENSMUSG00000059119	ProperStrand	31	chr19	8963027	8963117	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-5.8945
chr2	29014439	29014455	protein_coding	Setx	exon	ENSMUSG00000043535	ProperStrand	187	chr14	119559102	119559120	protein_coding	Hs6st3	intron	ENSMUSG00000053465	NonProperStrand	134	1	-9.4214
chr13	9833577	9833615	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr10	114837787	114837827	protein_coding	Zfc3h1	utr5	ENSMUSG00000034163	ProperStrand	58	2	-8.2785
chr5	24348218	24348274	protein_coding	Rheb	utr5	ENSMUSG00000028945	ProperStrand	8	chr8	98269971	98270061	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-9.6351
chr15	81937523	81937539	protein_coding	Mei1	exon	ENSMUSG00000068117	ProperStrand	53	chr9	120037933	120037987	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-4.9453
chr10	89282310	89282327	protein_coding	Uhrf1bp1l	utr3	ENSMUSG00000019951	NonProperStrand	55	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-5.3697
chr4	116827120	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	chr1	9932550	9932571	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-1.8598
chr5	31969664	31969680	protein_coding	Rbks	intron	ENSMUSG00000029136	ProperStrand	3	chr10	23505155	23505203	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-6.9610
chr5	115573087	115573187	protein_coding	Unc119b	utr3	ENSMUSG00000046562	ProperStrand	20	chr16	23110549	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.4825
chr11	115818694	115818721	protein_coding	Sap30bp	exon	ENSMUSG00000020755	ProperStrand	15	chr16	23110909	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.0842
chr1	187940817	187940838	protein_coding	Lyplal1	intron	ENSMUSG00000039246	NonProperStrand	2	chr12	17552949	17553033	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-12.4939
chr6	76445946	76446036	protein_coding	Gm9008	utr3	ENSMUSG00000072476	ProperStrand	1	chr12	92811932	92812012	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	1	-inf
chr15	85814186	85814203	protein_coding	Celsr1	intron	ENSMUSG00000016028	ProperStrand	56	chr11	6520372	6520443	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	1	-7.8552
chr4	122970371	122970455	protein_coding	Pabpc4	intron	ENSMUSG00000011257	ProperStrand	85	chr17	66468411	66468427	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	1	-9.1569
chr7	107721367	107721384	protein_coding	Mrpl48	intron	ENSMUSG00000030706	NonProperStrand	2	chr5	108336363	108336432	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-12.2768
chr5	110534364	110534381	protein_coding	Gtpbp6	exon	ENSMUSG00000033434	ProperStrand	9	chr19	8799022	8799078	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-9.6830
chrX	6989314	6989330	lincRNA	2010204K13Rik	exon	ENSMUSG00000063018	NonProperStrand	3	chr16	23111446	23111494	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-6.9982
chr5	65393604	65393625	protein_coding	Fam114a1	intron	ENSMUSG00000029185	NonProperStrand	8	chr16	23111392	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-11.9776
chr10	41239456	41239488	protein_coding	Cd164	exon	ENSMUSG00000019818	ProperStrand	38	chr4	131866159	131866249	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-7.5469
chr2	166890778	166890823	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	chr5	130300419	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-1.9021
chr11	113255581	113255671	protein_coding	Slc39a11	intron	ENSMUSG00000041654	ProperStrand	25	chr16	23111374	23111454	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.6475
chr11	62416540	62416559	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr13	68759738	68764669	protein_coding	Adcy2	exon	ENSMUSG00000021536	ProperStrand	237	1	-6.2432
chr13	53205603	53205620	protein_coding	Ror2	exon	ENSMUSG00000021464	ProperStrand	46	chr18	75162337	75162384	protein_coding	Rpl17	exon	ENSMUSG00000062328	ProperStrand	90	1	-13.0364
chr7	30807604	30807704	protein_coding	Zfp568	exon	ENSMUSG00000074221	ProperStrand	110	chr7	116663727	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.5396
chr11	72021169	72021249	protein_coding	Txndc17	exon	ENSMUSG00000020803	ProperStrand	7	chr10	75503677	75503767	protein_coding	Zfp280b	utr3	ENSMUSG00000049764	ProperStrand	25	2	-20.5518
chr11	6520360	6520440	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	chr19	44188456	44188546	snoRNA	ENSMUSG00000077391_SNORA12	.	ENSMUSG00000077391	ProperStrand	506	1	-3.5867
chr11	33057008	33060334	protein_coding	Npm1	exon	ENSMUSG00000057113	ProperStrand	352	chr19	8799052	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	9	-20.0209
chr6	91708086	91708163	protein_coding	Slc6a6	utr3	ENSMUSG00000030096	ProperStrand	206	chr9	15119647	15119698	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-0.8056
chr16	21221538	21221754	protein_coding	Ephb3	exon	ENSMUSG00000005958	ProperStrand	23	chr11	69483144	69483224	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.1990
chr14	93575981	93575998	protein_coding	Pcdh9	intron	ENSMUSG00000055421	ProperStrand	59	chr7	118219633	118219682	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-4.2023
chr19	3686517	3686534	protein_coding	Lrp5	utr5	ENSMUSG00000024913	NonProperStrand	4	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.0048
chr2	133378813	133378830	protein_coding	Bmp2	utr5	ENSMUSG00000027358	NonProperStrand	17	chr1	89673648	89673786	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-5.6845
chr5	81522762	81522780	protein_coding	Lphn3	intron	ENSMUSG00000037605	NonProperStrand	39	chr4	131908684	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.8599
chr15	65779898	65779915	protein_coding	Hhla1	exon	ENSMUSG00000072511	NonProperStrand	1	chr1	88247785	88247875	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-inf
chr6	101485358	101485378	LTR	MTEa	MaLR	chr6MTEa101485361	ProperStrand	45	chrX	148335640	148336106	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	1	-9.6433
chr9	58067490	58067580	protein_coding	Pml	utr3	ENSMUSG00000036986	ProperStrand	45	chr9	15119646	15119726	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.1394
chr12	100018450	100018467	protein_coding	Zc3h14	exon	ENSMUSG00000021012	ProperStrand	27	chr7	133520549	133520566	protein_coding	Spns1	exon	ENSMUSG00000030741	NonProperStrand	16	1	-17.5159
chr11	98546961	98547282	protein_coding	Psmd3	exon	ENSMUSG00000017221	ProperStrand	51	chr15	99665972	99665990	protein_coding	Lima1	intron	ENSMUSG00000023022	NonProperStrand	4	1	-22.1640
chr17	75053857	75054524	protein_coding	Birc6	exon	ENSMUSG00000024073	NonProperStrand	36	chr18	35716763	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.0537
chr11	68067261	68067277	protein_coding	Ntn1	intron	ENSMUSG00000020902	NonProperStrand	194	chr5	102311528	102311548	protein_coding	Wdfy3	utr3	ENSMUSG00000043940	ProperStrand	45	1	-11.5393
chr14	32990428	32990501	protein_coding	Ncoa4	exon	ENSMUSG00000056234	ProperStrand	15	chr19	8799833	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-7.7094
chr10	127560610	127560676	protein_coding	Baz2a	exon	ENSMUSG00000040054	ProperStrand	274	chr1	162965530	162965591	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-2.9427
chr6	48353421	48354004	protein_coding	Krba1	exon	ENSMUSG00000042810	ProperStrand	7	chr8	32260351	32260431	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-8.9777
chr8	40109628	40109680	protein_coding	Tusc3	exon	ENSMUSG00000039530	ProperStrand	15	chr4	131865855	131865945	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.2332
chr4	128898716	128899130	protein_coding	C77080	exon	ENSMUSG00000050390	ProperStrand	48	chr9	64024481	64024571	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	4	-19.1657
chr2	179322380	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr6	129628834	129628851	protein_coding	Klrc1	exon	ENSMUSG00000030167	NonProperStrand	49	1	-11.6202
chr2	93635812	93635912	protein_coding	Ext2	exon	ENSMUSG00000027198	ProperStrand	49	chr14	76247794	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-4.5582
chr3	101229415	101229449	protein_coding	Igsf3	exon	ENSMUSG00000042035	ProperStrand	73	chr14	65372753	65372842	snoRNA	ENSMUSG00000064442_SNORA36	.	ENSMUSG00000064442	ProperStrand	296	1	-9.7207
chr16	37777389	37777408	protein_coding	Fstl1	exon	ENSMUSG00000022816	ProperStrand	179	chr7	116663665	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-0.8886
chr2	63936036	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	ProperStrand	8	chr4	131865926	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	NonProperStrand	39	1	-17.6405
chr7	134943155	134943226	protein_coding	Setd1a	utr3	ENSMUSG00000042308	ProperStrand	58	chr16	23111452	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.3059
chr15	77597977	77597993	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr11	6519882	6519943	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-3.5766
chr16	11144176	11144276	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr5	137853214	137853231	protein_coding	Zan	exon	ENSMUSG00000079173	NonProperStrand	4	1	-16.1306
chrX	58225380	58225396	pseudogene	Rpl7l1-ps1	.	ENSMUSG00000081323	ProperStrand	46	chr17	35087940	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-5.7198
chr13	55755030	55755442	protein_coding	Ddx46	exon	ENSMUSG00000021500	ProperStrand	87	chr2	135820133	135824418	protein_coding	Plcb4	exon	ENSMUSG00000039943	NonProperStrand	57	1	-12.6694
chr8	41531344	41531368	protein_coding	Zdhhc2	intron	ENSMUSG00000039470	ProperStrand	5	chr13	96100556	96100646	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	1	-13.2266
chr19	3970031	3970047	protein_coding	1700055N04Rik	utr3	ENSMUSG00000037263	ProperStrand	6	chr17	24857732	24857796	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-6.7526
chr13	66223674	66223743	Unknown	MurSatRep1	Unknown	chr13MurSatRep166223333	ProperStrand	1	chr9	64022898	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-inf
chr7	129182414	129182453	protein_coding	Ears2	utr3	ENSMUSG00000030871	ProperStrand	10	chr7	117190028	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-6.8419
chr9	19462462	19462542	LINE	L1Md_A	L1	chr9L1Md_A19461964	ProperStrand	81	chr16	81597939	81598029	protein_coding	Ncam2	utr3	ENSMUSG00000022762	NonProperStrand	3	1	-18.9896
chr18	41356156	41356183	miRNA	Mir5097	dead	ENSMUSG00000093361	ProperStrand	221	chr3	88715214	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-4.6831
chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	chr17	5347022	5347040	protein_coding	Arid1b	utr3	ENSMUSG00000069729	NonProperStrand	22	1	-11.0948
chr3	56418410	56418428	LTR	RMER2	ERV1	chr3RMER256418362	ProperStrand	1	chr4	149611764	149611797	protein_coding	Eno1	intron	ENSMUSG00000063524	ProperStrand	432	1	-inf
chr19	9043952	9044341	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	chr5	108336390	108336490	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-1.5049
chr11	55274485	55274575	protein_coding	Atox1	intron	ENSMUSG00000018585	ProperStrand	15	chr5	130300470	130300550	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-5.1031
chr3	129264479	129264526	protein_coding	Elovl6	intron	ENSMUSG00000041220	ProperStrand	59	chr3	123210911	123210968	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.0937
chr15	5066656	5067310	protein_coding	Rpl37	utr5	ENSMUSG00000041841	ProperStrand	69	chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	1	-9.5513
chr8	87596283	87596383	protein_coding-noncoding	Dhps	utr5	ENSMUSG00000060038	ProperStrand	4	chr7	148634776	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-9.5448
chr16	30565540	30565577	protein_coding	Lsg1	exon	ENSMUSG00000022538	ProperStrand	25	chr9	120038612	120038672	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.6808
chr8	64017612	64028376	protein_coding	Palld	exon	ENSMUSG00000058056	NonProperStrand	125	chr4	3762227	3762270	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	1	-8.0211
chr15	51696928	51697006	protein_coding	Eif3h	utr5	ENSMUSG00000022312	ProperStrand	45	chr16	72800514	72800532	protein_coding	Robo1	intron	ENSMUSG00000022883	NonProperStrand	188	1	-11.6022
chr4	43505657	43505823	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr9	65044377	65044467	snRNA	ENSMUSG00000075763_U5	.	ENSMUSG00000075763	ProperStrand	216	4	-4.7763
chr17	71221666	71221747	antisense	RP23-85E24.1	.	ENSMUSG00000093514	ProperStrand	5	chr2	158182156	158182182	lincRNA	9430008C03Rik	intron	ENSMUSG00000085385	ProperStrand	1039	4	-19.5582
chr6	49397261	49397286	protein_coding	Stk31	exon	ENSMUSG00000023403	ProperStrand	3	chr7	107065549	107065565	protein_coding	Xrra1	exon	ENSMUSG00000035211	NonProperStrand	24	1	-inf
chr3	88104387	88104467	protein_coding-noncoding	Cct3	utr5	ENSMUSG00000001416	ProperStrand	1	chr5	141220561	141220651	protein_coding	Amz1	intron	ENSMUSG00000050022	NonProperStrand	5	1	-inf
chr9	83737546	83737693	protein_coding	Ttk	exon	ENSMUSG00000038379	ProperStrand	36	chr15	95804715	95804799	protein_coding	Ano6	utr3	ENSMUSG00000064210	ProperStrand	39	1	-15.2029
chr11	22186951	22187003	protein_coding	Ehbp1	intron	ENSMUSG00000042302	ProperStrand	22	chr11	6428122	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.0956
chr2	90235285	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	83693562	83693578	protein_coding	Fam171b	exon	ENSMUSG00000048388	NonProperStrand	175	4	-8.9966
chr7	29344358	29344397	protein_coding	Pak4	utr3	ENSMUSG00000030602	ProperStrand	18	chr10	23505559	23505619	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-9.9829
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	102081761	102081780	protein_coding	Pde4b	intron	ENSMUSG00000028525	ProperStrand	35	2	-9.0354
chr18	89387605	89387621	protein_coding	Cd226	intron	ENSMUSG00000034028	ProperStrand	47	chr16	23110527	23110557	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.8869
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr17	6232006	6232022	protein_coding	Tulp4	exon	ENSMUSG00000034377	NonProperStrand	265	2	-8.0433
chr5	115939522	115939612	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr17	13115657	13115737	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	1	-2.3760
chr3	97874913	97875015	protein_coding	Notch2	exon	ENSMUSG00000027878	ProperStrand	86	chr2	18508668	18508698	tRNA	tRNA1947-AsnGTT	.	854905	ProperStrand	179	1	-10.3969
chr9	72569347	72569447	protein_coding	Nedd4	exon	ENSMUSG00000032216	ProperStrand	308	chr1	72290909	72290975	snRNA	ENSMUSG00000093111_AC120136.1	.	ENSMUSG00000093111	ProperStrand	137	1	-8.3826
chr9	120040598	120040619	protein_coding	Rpsa	utr3	ENSMUSG00000032518	ProperStrand	398	chr2	26493424	26493483	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-0.7637
chr4	104904719	104904749	protein_coding	Ppap2b	utr3	ENSMUSG00000028517	ProperStrand	8	chr5	92483899	92483942	protein_coding	G3bp2	exon	ENSMUSG00000029405	ProperStrand	78	1	-16.8259
chr13	64469512	64469546	protein_coding	Ctsl	exon	ENSMUSG00000021477	ProperStrand	44	chr7	118219575	118219631	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	3	-11.3400
chr17	56448808	56448855	protein_coding	Uhrf1	exon	ENSMUSG00000001228	ProperStrand	229	chr4	56910507	56910618	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	4	-11.7326
chr8	98270015	98270115	protein_coding	Cnot1	intron	ENSMUSG00000036550	ProperStrand	315	chr2	144087322	144087352	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-3.3690
chr11	98064949	98064991	protein_coding	Cdk12	exon	ENSMUSG00000003119	ProperStrand	50	chr8	26885600	26885616	protein_coding	Bag4	intron	ENSMUSG00000037316	NonProperStrand	14	1	-16.7298
chrX	8911845	8911866	LTR	RMER20B	ERVK	chrXRMER20B8911600	NonProperStrand	2	chr3	85944541	85944609	snoRNA	ENSMUSG00000064390_Rnu73b	.	ENSMUSG00000064390	ProperStrand	164	1	-19.1916
chr5	118477951	118477967	protein_coding	Tesc	exon	ENSMUSG00000029359	ProperStrand	114	chrX	84483699	84483717	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-6.9712
chr16	89805622	89805640	protein_coding	Tiam1	intron	ENSMUSG00000002489	ProperStrand	80	chr11	96680463	96680564	protein_coding	Nfe2l1	utr3	ENSMUSG00000038615	ProperStrand	118	3	-21.9314
chr19	57685453	57685475	Low_complexity	GC_rich	Low_complexity	chr19GC_rich57685453	ProperStrand	13	chr17	35088970	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	3	-19.1082
chr2	131897164	131897202	protein_coding	Slc23a2	exon	ENSMUSG00000027340	ProperStrand	44	chr4	131908699	131908789	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.6723
chr7	4102870	4102928	protein_coding	Cdc42ep5	utr3	ENSMUSG00000063838	ProperStrand	2	chr11	48614369	48614434	snoRNA	ENSMUSG00000064500_SNORD95	.	ENSMUSG00000064500	ProperStrand	100	1	-inf
chr3	86662983	86718222	protein_coding	Dclk2	intron	ENSMUSG00000028078	ProperStrand	50	chr16	23110914	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.0847
chrX	71517851	71517955	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	chr11	106362316	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	2	-0.8758
chr14	37944773	37944829	protein_coding	Ghitm	exon	ENSMUSG00000041028	ProperStrand	26	chr4	131908236	131908296	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	5	-12.8599
chr17	43843088	43843104	protein_coding	Cyp39a1	intron	ENSMUSG00000023963	NonProperStrand	81	chr3	68889028	68889048	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	2	-4.7526
chr11	102721373	102721412	protein_coding	Eftud2	exon	ENSMUSG00000020929	ProperStrand	86	chr7	117163167	117163185	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-5.5029
chr2	150657067	150657167	protein_coding	Pygb	utr3	ENSMUSG00000033059	ProperStrand	6	chr4	53873614	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	2	-18.9891
chr5	117732802	117732837	protein_coding	Pebp1	utr3	ENSMUSG00000032959	ProperStrand	54	chr16	23110894	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-1.7104
chr16	8690096	8712280	protein_coding	Usp7	utr3	ENSMUSG00000022710	ProperStrand	118	chr9	15119639	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-2.8695
chr2	90235310	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	149611349	149611447	protein_coding	Eno1	utr5	ENSMUSG00000063524	ProperStrand	432	1	-1.1289
chr15	98428804	98428820	protein_coding	Adcy6	exon	ENSMUSG00000022994	ProperStrand	50	chr14	33005084	33005138	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-4.3389
chr10	60915174	60915190	protein_coding	Eif4ebp2	exon	ENSMUSG00000020091	ProperStrand	39	chr9	64024948	64024998	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	1	-10.0090
chr11	119136228	119136244	protein_coding	Gaa	exon	ENSMUSG00000025579	NonProperStrand	201	chr9	44143128	44143174	protein_coding	H2afx	exon	ENSMUSG00000049932	ProperStrand	137	1	-9.2329
chr9	121593112	121593151	protein_coding	Sec22c	utr3	ENSMUSG00000061536	ProperStrand	2	chr10	110918549	110918639	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-10.7503
chr11	53146608	53146626	protein_coding	Zcchc10	utr3	ENSMUSG00000018239	NonProperStrand	10	chr5	77739587	77742239	protein_coding	Polr2b	utr5	ENSMUSG00000029250	ProperStrand	68	1	-16.6891
chr8	40189058	40189075	protein_coding	Tusc3	intron	ENSMUSG00000039530	ProperStrand	15	chr5	108334195	108334241	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-7.5783
chr1	77397797	77397852	protein_coding	Epha4	exon	ENSMUSG00000026235	ProperStrand	57	chr7	118219574	118219624	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	5	-17.2289
chr5	135637598	135637671	protein_coding	Tbl2	utr3	ENSMUSG00000005374	ProperStrand	28	chr1	38178337	38178427	protein_coding	Rev1	intron	ENSMUSG00000026082	ProperStrand	48	2	-19.5274
chr9	78023109	78023150	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr3	32237744	32237787	protein_coding	Zmat3	utr3	ENSMUSG00000027663	ProperStrand	62	1	-5.8134
chr7	34292078	34292158	LINE	Lx4A	L1	chr7Lx4A34291916	NonProperStrand	1	chr7	34292326	34292416	LTR	ORR1A2	MaLR	chr7ORR1A234292173	NonProperStrand	1	1	-inf
chr8	125202944	125202961	protein_coding	Cbfa2t3	intron	ENSMUSG00000006362	ProperStrand	41	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-9.6926
chr17	35195518	35195608	protein_coding	Clic1	utr3	ENSMUSG00000007041	ProperStrand	12	chr4	131908705	131908785	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.9639
chr8	24042846	24042864	protein_coding	Myst3	exon	ENSMUSG00000031540	ProperStrand	111	chr7	116663645	116663695	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.5263
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr4	154266635	154266653	protein_coding	Mmel1	intron	ENSMUSG00000058183	ProperStrand	6	1	-13.6603
chr2	32563527	32563545	protein_coding	Cdk9	exon	ENSMUSG00000009555	NonProperStrand	49	chr5	130300434	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-7.3969
chr18	66155402	66155492	protein_coding	Lman1	intron	ENSMUSG00000041891	ProperStrand	36	chr18	35716763	35716843	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.0537
chr12	109599737	109599796	protein_coding	Cyp46a1	exon	ENSMUSG00000021259	ProperStrand	7	chr17	37147098	37147128	protein_coding	Zfp57	exon	ENSMUSG00000036036	ProperStrand	39	4	-19.0120
chr11	48598648	48598738	LTR	ORR1B1	MaLR	chr11ORR1B148598579	ProperStrand	1	chr13	43867315	43867395	LTR	ORR1E	MaLR	chr13ORR1E43867268	ProperStrand	1	1	-inf
chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	1	-1.6962
chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	chr5	90136836	90136852	protein_coding	Adamts3	exon	ENSMUSG00000043635	ProperStrand	8	1	-13.4106
chr2	70706454	70706475	LINE	L1MC1	L1	chr2L1MC170706346	NonProperStrand	16	chr17	35089181	35089225	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	3	-17.8175
chr2	90235301	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	95217098	95217142	protein_coding	Pask	exon	ENSMUSG00000026274	ProperStrand	20	1	-6.6233
chr10	21717808	21717898	protein_coding-noncoding	Sgk1	utr5	ENSMUSG00000019970	ProperStrand	2	chr10	21717768	21717848	protein_coding	Sgk1	exon	ENSMUSG00000019970	ProperStrand	55	2	-inf
chr18	75531429	75531490	protein_coding	Smad7	intron	ENSMUSG00000025880	ProperStrand	83	chr1	162967511	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-2.8889
chr12	106909713	106909803	protein_coding	Atg2b	exon	ENSMUSG00000041341	ProperStrand	67	chr9	15119292	15119372	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-4.8951
chr15	101923506	101923606	protein_coding	Eif4b	exon	ENSMUSG00000058655	ProperStrand	484	chr15	79913288	79913346	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-1.0702
chr6	54379743	54379760	lincRNA	9130019P16Rik	exon	ENSMUSG00000073067	ProperStrand	255	chr1	162968442	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-3.3212
chr2	9842877	9842893	protein_coding	Taf3	exon	ENSMUSG00000025782	ProperStrand	62	chr18	35716837	35716883	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-3.8061
chr1	74576291	74576313	protein_coding	Rqcd1	utr3	ENSMUSG00000026174	ProperStrand	16	chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	1	-12.7608
chr4	122926839	122926858	protein_coding	Heyl	utr3	ENSMUSG00000032744	ProperStrand	31	chr9	119011770	119011786	protein_coding	Dlec1	exon	ENSMUSG00000038060	NonProperStrand	27	1	-16.2115
chr10	89512698	89512714	protein_coding	Anks1b	exon	ENSMUSG00000058589	ProperStrand	68	chr16	23110454	23110475	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.2508
chr12	56009986	56010003	protein_coding	Baz1a	exon	ENSMUSG00000035021	NonProperStrand	6	chr5	108336377	108336409	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-9.5743
chr2	129998641	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr4	41150096	41150136	snoRNA	ENSMUSG00000089265_SNORD121A	.	ENSMUSG00000089265	ProperStrand	370	1	-4.5420
chr8	125897940	125927109	protein_coding	Tcf25	exon	ENSMUSG00000001472	ProperStrand	66	chr4	131908688	131908771	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	9	-15.0063
chr8	109536811	109536868	protein_coding	Sntb2	utr3	ENSMUSG00000041308	ProperStrand	41	chr19	8799834	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	2	-9.3034
chr9	40611369	40611430	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr1	162965528	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	4	-0.9581
chr2	126400478	126400494	protein_coding	Slc27a2	exon	ENSMUSG00000027359	ProperStrand	17	chr18	34969083	34969141	protein_coding	Kdm3b	exon	ENSMUSG00000038773	ProperStrand	80	1	-15.2920
chr13	55445702	55445777	protein_coding	Lman2	utr3	ENSMUSG00000021484	ProperStrand	26	chr11	77995188	77995242	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	4	-20.3689
chr3	85944567	85944610	snoRNA	ENSMUSG00000064390_Rnu73b	.	ENSMUSG00000064390	ProperStrand	164	chr8	73419656	73419710	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-2.7602
chr12	60079591	60083597	protein_coding	Sec23a	exon	ENSMUSG00000020986	ProperStrand	16	chr1	162967530	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-9.8841
chr16	22176881	22176961	SINE	B1_Mur1	Alu	chr16B1_Mur122176855	NonProperStrand	1	chr16	22176731	22176821	SINE	B3A	B2	chr16B3A22176675	NonProperStrand	1	1	-inf
chr5	114294291	114294360	protein_coding	Coro1c	utr3	ENSMUSG00000004530	ProperStrand	44	chr15	79908939	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-6.0822
chr2	167925870	167925908	protein_coding	Pard6b	utr3	ENSMUSG00000044641	ProperStrand	5	chr7	104054544	104054560	protein_coding	Odz4	exon	ENSMUSG00000048078	ProperStrand	93	1	-17.4832
chr11	75316862	75316933	protein_coding	Prpf8	utr3	ENSMUSG00000020850	ProperStrand	255	chr12	106269288	106269378	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-1.6307
chr5	3624421	3624493	protein_coding	Pex1	exon	ENSMUSG00000005907	ProperStrand	11	chr11	68886932	68887022	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-7.5122
chr17	36093890	36093917	protein_coding	Abcf1	utr3	ENSMUSG00000038762	ProperStrand	206	chr12	112779229	112779282	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	4	-8.9959
chr5	136707644	136707662	protein_coding	Sh2b2	exon	ENSMUSG00000005057	NonProperStrand	101	chr2	83644877	83644894	protein_coding	Itgav	utr3	ENSMUSG00000027087	NonProperStrand	33	1	-13.4742
chr9	49338898	49338988	protein_coding	Ncam1	intron	ENSMUSG00000039542	ProperStrand	18	chr16	23111389	23111469	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.2408
chr18	73693169	73693189	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr4	116827121	116827180	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	2	-1.0106
chr8	59992833	59992933	protein_coding	Hmgb2	utr3	ENSMUSG00000054717	ProperStrand	184	chr1	162965988	162966041	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-1.6875
chr16	33846391	33846409	protein_coding	Itgb5	intron	ENSMUSG00000022817	ProperStrand	49	chr5	54389949	54389965	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	1	-11.1898
chr11	87793155	87793188	protein_coding	Dynll2	utr3	ENSMUSG00000020483	ProperStrand	22	chr5	149141854	149141905	protein_coding	Slc7a1	utr3	ENSMUSG00000041313	ProperStrand	65	2	-inf
chr7	3657351	3657397	protein_coding	Rps9	exon	ENSMUSG00000006333	ProperStrand	87	chr14	56389353	56390228	protein_coding	Adcy4	exon	ENSMUSG00000022220	ProperStrand	29	2	-inf
chr12	55797769	55797891	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	chr12	112779147	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	2	-0.9237
chr7	145588237	145588255	protein_coding	Tcerg1l	intron	ENSMUSG00000091002	NonProperStrand	3	chr4	131865855	131865934	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.6896
chr5	110860770	110860845	protein_coding	Fbrsl1	intron	ENSMUSG00000043323	ProperStrand	131	chr8	122795492	122795534	protein_coding	Gm20388	intron	ENSMUSG00000092329	ProperStrand	295	1	-8.5577
chr14	30123206	30123228	protein_coding	Cacna2d3	intron	ENSMUSG00000021991	NonProperStrand	26	chr9	120038562	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	3	-11.0819
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr6	91437313	91437418	protein_coding	Tmem43	utr3	ENSMUSG00000030095	ProperStrand	14	1	-11.5644
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr18	35714157	35714257	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	3	-3.4272
chr8	13416897	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr1	137271110	137271126	protein_coding	Shisa4	exon	ENSMUSG00000041889	ProperStrand	64	1	-6.3266
chr2	125390096	125391997	protein_coding	Cep152	exon	ENSMUSG00000068394	ProperStrand	60	chr4	131866175	131866255	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-3.6651
chr1	155066647	155066663	protein_coding	Lamc1	utr3	ENSMUSG00000026478	NonProperStrand	12	chr11	117675524	117675552	protein_coding	Syngr2	utr3	ENSMUSG00000048277	ProperStrand	15	1	-19.3113
chr5	54031326	54037136	protein_coding	Rbpj	exon	ENSMUSG00000039191	ProperStrand	96	chr16	23110875	23110992	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-2.2991
chr2	152150054	152150144	protein_coding	Rbck1	exon	ENSMUSG00000027466	ProperStrand	30	chr16	23110466	23110546	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.7075
chr12	26995566	26995603	protein_coding	Rnf144a	exon	ENSMUSG00000020642	ProperStrand	15	chr2	32818803	32818882	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-8.2480
chr7	108347075	108347092	protein_coding	Fchsd2	exon	ENSMUSG00000030691	NonProperStrand	28	chr13	103895241	103895257	protein_coding	Mast4	intron	ENSMUSG00000034751	ProperStrand	150	1	-13.0179
chr1	127491935	127491952	protein_coding	Slc35f5	utr3	ENSMUSG00000026342	ProperStrand	70	chr4	131908717	131908807	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.0215
chr8	13416896	13416912	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr13	104902156	104902176	protein_coding	Sgtb	intron	ENSMUSG00000042743	ProperStrand	60	1	-6.4542
chr3	67161283	67161299	protein_coding	Rsrc1	utr3	ENSMUSG00000034544	NonProperStrand	71	chr9	64022854	64022893	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-7.6893
chr5	136673671	136673687	protein_coding	Prkrip1	exon	ENSMUSG00000039737	NonProperStrand	30	chr2	89368462	89368478	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	1	-11.7595
mmu-miR-295-3p	4	23	miRNA	mmu-miR-295-3p	.	mmu-miR-295-3p	ProperStrand	19	chr10	79821580	79821988	protein_coding	Plk5	exon	ENSMUSG00000035486	ProperStrand	4	1	-inf
chr18	34792102	34792202	protein_coding	Kif20a	exon	ENSMUSG00000003779	ProperStrand	50	chr2	26494760	26494825	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	3	-8.6025
chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr15	78259253	78259269	protein_coding	Kctd17	exon	ENSMUSG00000033287	NonProperStrand	26	1	-8.1274
chr16	23110454	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	chr17	26360446	26360543	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	9	-8.2693
chr4	131908228	131908269	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr15	95664424	95664454	protein_coding	Ano6	intron	ENSMUSG00000064210	ProperStrand	39	2	-12.9647
chr3	100766677	100766714	protein_coding	Ttf2	exon	ENSMUSG00000033222	ProperStrand	50	chr1	36748521	36749071	protein_coding	Cox5b	exon	ENSMUSG00000061518	ProperStrand	43	1	-14.3595
chr11	97553011	97553189	protein_coding	Pcgf2	exon	ENSMUSG00000018537	ProperStrand	31	chr4	131908688	131908742	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-6.0994
chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-1.7343
chr11	9019448	9029510	protein_coding	Upp1	utr5	ENSMUSG00000020407	ProperStrand	73	chr7	117189886	117189966	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-5.1528
chr4	43505700	43505780	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr17	26350570	26350660	protein_coding	Itfg3	exon	ENSMUSG00000024187	ProperStrand	30	1	-4.3617
chrX	148366383	148367104	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	chr9	15118335	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-0.9077
chr6	122269363	122269380	protein_coding	Phc1	exon	ENSMUSG00000040669	ProperStrand	158	chr11	106362640	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-5.4960
chr5	151755616	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr11	97642952	97643075	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	9	-1.3279
chr6	54379743	54379760	lincRNA	9130019P16Rik	exon	ENSMUSG00000073067	ProperStrand	255	chr17	31982653	31982725	protein_coding	Sik1	utr3	ENSMUSG00000024042	ProperStrand	55	1	-10.5876
chr15	81110991	81111009	SINE	ID4	ID	chr15ID481110956	ProperStrand	272	chr11	6428108	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-1.7225
chr3	153574571	153574629	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	chr5	108334195	108334273	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-1.6135
chr15	88695574	88695664	protein_coding	Pim3	utr3	ENSMUSG00000035828	ProperStrand	66	chr7	148634708	148634788	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-3.8075
chr8	87525221	87525237	protein_coding	Hook2	exon	ENSMUSG00000052566	ProperStrand	204	chr3	121995860	121995901	tRNA	tRNA628-ArgTCT	.	1748759	ProperStrand	7	1	-15.2966
chr5	74489543	74489563	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr6	31399568	31401529	protein_coding	Mkln1	exon	ENSMUSG00000025609	ProperStrand	18	1	-8.0291
chr2	119412156	119412247	protein_coding	1500003O03Rik	utr3	ENSMUSG00000014077	ProperStrand	22	chr16	23110460	23110540	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.2978
chrX	7182489	7182506	protein_coding	Ccdc22	utr5	ENSMUSG00000031143	NonProperStrand	51	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-10.7555
chr4	124528348	124528949	protein_coding	Yrdc	exon	ENSMUSG00000028889	ProperStrand	13	chrX	12700300	12700341	protein_coding	Usp9x	exon	ENSMUSG00000031010	ProperStrand	174	4	-19.3535
chr6	36796693	36796718	protein_coding	Dgki	utr3	ENSMUSG00000038665	ProperStrand	22	chr16	23111741	23111837	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-6.2517
chr17	46814084	46814100	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr17	24665420	24665439	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-1.3813
chr19	24552582	24552600	protein_coding	Pip5k1b	intron	ENSMUSG00000024867	NonProperStrand	40	chr11	69483238	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.1638
chr3	88373381	88373452	protein_coding	Ubqln4	utr3	ENSMUSG00000008604	ProperStrand	49	chr7	118219575	118219665	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-4.5566
chr5	34979674	34979722	protein_coding	Mfsd10	utr5	ENSMUSG00000001082	ProperStrand	38	chr11	69481334	69481386	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-4.0476
chr6	47731673	47731714	misc_RNA	Y_RNA	.	ENSMUSG00000064945	ProperStrand	93	chr3	123210854	123210881	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-2.6406
chr18	10052128	10052151	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr11	83107806	83107902	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	2	-7.3298
chr10	127560686	127560886	protein_coding	Baz2a	exon	ENSMUSG00000040054	ProperStrand	274	chr18	33954817	33954897	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-1.0544
chr13	99083638	99086195	protein_coding	Btf3	exon	ENSMUSG00000021660	ProperStrand	64	chr15	79913288	79913344	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	4	-11.6309
chr19	37263258	37263279	protein_coding	Cpeb3	intron	ENSMUSG00000039652	ProperStrand	8	chr4	131908757	131908794	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.7736
chr5	27730588	27730605	protein_coding	Dpp6	intron	ENSMUSG00000061576	ProperStrand	35	chr16	23110873	23110889	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.8578
chr11	119136228	119136244	protein_coding	Gaa	exon	ENSMUSG00000025579	NonProperStrand	201	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.2986
chr11	87616236	87616900	protein_coding	Mpo	exon	ENSMUSG00000009350	ProperStrand	1	chr18	33954817	33954948	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-inf
chr4	155323730	155323812	protein_coding	Ube2j2	intron	ENSMUSG00000023286	ProperStrand	35	chr16	23111754	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.8115
chr2	164665019	164665061	protein_coding	Pltp	utr3	ENSMUSG00000017754	ProperStrand	15	chr1	181027187	181027205	protein_coding	Smyd3	intron	ENSMUSG00000055067	ProperStrand	231	1	-13.4349
chr1	88425799	88426037	protein_coding	Ptma	exon	ENSMUSG00000026238	ProperStrand	385	chr4	155548020	155548120	protein_coding	Agrn	exon	ENSMUSG00000041936	ProperStrand	175	1	-7.4530
chr16	22265625	22265643	protein_coding	Tra2b	intron	ENSMUSG00000022858	NonProperStrand	6	chr7	133938805	133938842	protein_coding	Aldoa	utr3	ENSMUSG00000030695	ProperStrand	721	1	-13.0967
chr1	89611752	89611842	protein_coding	Inpp5d	exon	ENSMUSG00000026288	ProperStrand	75	chr7	29136525	29136609	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.9970
chr11	69479165	69479255	protein_coding	Cd68	exon	ENSMUSG00000018774	ProperStrand	12	chr9	15119646	15119726	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.6882
chr10	90616068	90623954	protein_coding	Tmpo	exon	ENSMUSG00000019961	ProperStrand	57	chr17	24857717	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-4.2297
chr4	69925631	69927562	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	chr4	131865854	131865977	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	12	-1.5534
chr10	10933355	10933378	protein_coding	Shprh	utr3	ENSMUSG00000090112	ProperStrand	52	chr2	22444877	22444949	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	2	-12.8710
chr19	5365126	5365885	protein_coding	Banf1	exon	ENSMUSG00000024844	ProperStrand	34	chr19	8798742	8798812	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-5.9114
chr11	32620584	32622070	protein_coding	Fbxw11	exon	ENSMUSG00000020271	ProperStrand	36	chr15	58286516	58286596	protein_coding	D15Ertd621e	utr3	ENSMUSG00000037119	ProperStrand	26	1	-16.0197
chr15	81654037	81654084	protein_coding	Tef	exon	ENSMUSG00000022389	ProperStrand	12	chr11	3043762	3044225	protein_coding	Sfi1	exon	ENSMUSG00000023764	ProperStrand	17	2	-20.2997
chr6	143429777	143429793	LINE	L1MA4	L1	chr6L1MA4143429728	ProperStrand	39	chr7	116664867	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-5.6891
chr7	135381530	135381549	protein_coding	Armc5	utr5	ENSMUSG00000042178	ProperStrand	5	chr4	131865885	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-6.5022
chr9	108962820	108962880	protein_coding	Atrip	exon	ENSMUSG00000025646	ProperStrand	3	chr10	110918627	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-9.6547
chr6	113943512	113943535	protein_coding	Atp2b2	intron	ENSMUSG00000030302	NonProperStrand	14	chr12	17552960	17553029	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	3	-18.1451
chr6	44773824	44773904	LTR	RMER6A	ERVK	chr6RMER6A44773782	NonProperStrand	1	chr1	135245186	135245276	SINE	B1_Mur2	Alu	chr1B1_Mur2135245140	NonProperStrand	1	1	-inf
chrX	143119623	143119641	SINE	B3	B2	chrXB3143119430	ProperStrand	1	chr18	35714144	35714204	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-inf
chr11	23184859	23184895	protein_coding	Xpo1	exon	ENSMUSG00000020290	ProperStrand	123	chr9	120038616	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.8283
chr16	8843103	8843119	protein_coding	1810013L24Rik	exon	ENSMUSG00000022507	ProperStrand	20	chr1	162965531	162965562	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.3741
chr15	76446567	76447060	protein_coding	Slc39a4	exon	ENSMUSG00000063354	ProperStrand	35	chr17	24856620	24856710	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-7.5011
chr1	63225682	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	chr11	116938556	116938594	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	2	-1.2394
chr5	152198645	152198661	lincRNA	1700028E10Rik	exon	ENSMUSG00000087548	ProperStrand	53	chr1	162965531	162965598	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.5033
chr3	95092299	95094971	protein_coding	Fam63a	exon	ENSMUSG00000038712	ProperStrand	37	chr10	23505152	23505209	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.9550
chr17	56891899	56896691	protein_coding	Nrtn	utr5	ENSMUSG00000039481	ProperStrand	5	chr16	23110871	23110961	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-7.3377
chr13	9833564	9833651	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr4	131890405	131890463	protein_coding	Rcc1	exon	ENSMUSG00000028896	ProperStrand	55	1	-5.1231
chr13	23831256	23831284	protein_coding	Hist1h1c	exon	ENSMUSG00000036181	ProperStrand	99	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-5.9937
chr11	66204284	66204301	protein_coding	Shisa6	intron	ENSMUSG00000053930	ProperStrand	23	chr11	106362640	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-9.3352
chr14	19102547	19102802	protein_coding	Rpl15	exon	ENSMUSG00000012405	ProperStrand	145	chr10	39978363	39978475	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	3	-9.2469
chr19	5797380	5797431	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr4	129662259	129662276	protein_coding	Bai2	utr5	ENSMUSG00000028782	ProperStrand	119	3	-14.1733
chr2	157119950	157120991	protein_coding	Rpn2	exon	ENSMUSG00000027642	ProperStrand	363	chr12	74383580	74383636	protein_coding	Trmt5	intron	ENSMUSG00000034442	ProperStrand	4	1	-15.3893
chr7	123291534	123291603	protein_coding	Plekha7	intron	ENSMUSG00000045659	ProperStrand	66	chr5	147646720	147646812	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	4	-20.1290
chr17	32453268	32453285	protein_coding	Akap8	exon	ENSMUSG00000024045	ProperStrand	339	chr12	17552949	17553031	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	2	-3.5430
chr16	24530425	24530515	protein_coding	Lpp	intron	ENSMUSG00000033306	ProperStrand	38	chr2	26493369	26493449	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-4.6088
chr10	128014040	128014057	protein_coding	Erbb3	exon	ENSMUSG00000018166	NonProperStrand	12	chr17	35089183	35089238	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-8.7239
chr4	142857397	142857440	protein_coding	Pdpn	utr3	ENSMUSG00000028583	ProperStrand	30	chr9	15118325	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-4.7797
chr6	122283381	122284110	protein_coding	Phc1	exon	ENSMUSG00000040669	ProperStrand	158	chr9	15118332	15118374	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-1.8070
chr9	113589237	113594468	protein_coding	Pdcd6ip	exon	ENSMUSG00000032504	ProperStrand	53	chr19	8799597	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-7.0132
chr11	102169449	102169629	protein_coding	Ubtf	exon	ENSMUSG00000020923	ProperStrand	66	chr9	120039565	120039645	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.1459
chr8	125626932	125626986	snoRNA	ENSMUSG00000064450_Snord68	.	ENSMUSG00000064450	ProperStrand	181	chr17	35087894	35087945	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	2	-5.3681
chr5	37667536	37667553	protein_coding	Crmp1	exon	ENSMUSG00000029121	ProperStrand	85	chr5	141000555	141000572	protein_coding	Chst12	exon	ENSMUSG00000036599	NonProperStrand	42	1	-13.3309
chr2	166329429	166329451	lincRNA	Gm14267	intron	ENSMUSG00000085682	ProperStrand	2	chr11	6428113	6428156	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-inf
chr10	12902244	12902320	protein_coding	Ltv1	exon	ENSMUSG00000019814	ProperStrand	76	chr2	174171046	174171232	protein_coding	Gnas	utr3	ENSMUSG00000027523	ProperStrand	41	1	-13.6115
chr12	102297023	102297040	protein_coding	Smek1	exon	ENSMUSG00000041846	ProperStrand	66	chr17	35370734	35370780	protein_coding	Nfkbil1	intron	ENSMUSG00000042419	ProperStrand	4	1	-18.4376
chrX	45788962	45788979	protein_coding	Elf4	intron	ENSMUSG00000031103	NonProperStrand	49	chr8	98257961	98258025	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	1	-10.3981
chr17	35045600	35045617	protein_coding	Ehmt2	exon	ENSMUSG00000013787	ProperStrand	42	chr4	147991628	147991701	protein_coding	Tardbp	utr3	ENSMUSG00000041459	ProperStrand	120	6	-inf
chr1	136244726	136244761	protein_coding	Tmem183a	exon	ENSMUSG00000042305	ProperStrand	10	chr16	23111372	23111442	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.3721
chr5	116004529	116004619	protein_coding	Pxn	utr3	ENSMUSG00000029528	ProperStrand	171	chr2	22444454	22444534	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-5.7070
chr16	20686443	20692817	protein_coding	Eif4g1	utr3	ENSMUSG00000045983	ProperStrand	199	chr3	123210852	123210952	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	4	-2.8864
chr2	160795215	160795242	protein_coding	Chd6	exon	ENSMUSG00000057133	ProperStrand	104	chr11	83107812	83107902	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	1	-7.7372
chr2	26768049	26768112	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	chr10	23506278	23506347	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-2.3249
chr14	35168545	35168563	protein_coding	Fam25c	utr5	ENSMUSG00000043681	NonProperStrand	29	chr3	123210876	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.3336
chr6	144958628	144963978	protein_coding	Bcat1	exon	ENSMUSG00000030268	ProperStrand	49	chr1	162968455	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-6.4794
chr2	90235286	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	113208756	113208772	protein_coding	Vac14	intron	ENSMUSG00000010936	NonProperStrand	23	1	-6.3423
chr11	120682242	120682291	protein_coding	Fasn	exon	ENSMUSG00000025153	ProperStrand	298	chr12	105582410	105582426	protein_coding	Serpina3k	exon	ENSMUSG00000058207	ProperStrand	14	1	-13.0661
chr11	97815258	97816071	protein_coding	Plxdc1	exon	ENSMUSG00000017417	ProperStrand	20	chr9	15119647	15119737	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	5	-18.6475
chr5	34969581	34969621	protein_coding	Add1	intron	ENSMUSG00000029106	ProperStrand	88	chr8	26266924	26266999	protein_coding	Tacc1	utr3	ENSMUSG00000065954	ProperStrand	12	2	-20.2830
chr11	79847094	79847146	protein_coding	Suz12	utr3	ENSMUSG00000017548	ProperStrand	53	chr4	131908689	131908750	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.3969
chr10	75026501	75026591	protein_coding	Ggt1	intron	ENSMUSG00000006345	ProperStrand	2	chrX	34622954	34623034	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-10.4435
chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	chr17	27559700	27559717	protein_coding	Grm4	utr3	ENSMUSG00000063239	ProperStrand	147	1	-7.4208
chr3	121656207	121656223	protein_coding	Arhgap29	utr5	ENSMUSG00000039831	NonProperStrand	6	chr14	11815940	11815957	protein_coding	Fhit	intron	ENSMUSG00000060579	ProperStrand	32	1	-18.4283
chr6	77195102	77195119	protein_coding	Lrrtm1	exon	ENSMUSG00000060780	ProperStrand	19	chr16	23111448	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.1411
chr17	39979984	39980009	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr10	11011253	11011270	protein_coding	Fbxo30	exon	ENSMUSG00000047648	ProperStrand	7	1	-11.6343
chr2	119590540	119590625	protein_coding	Rpap1	exon	ENSMUSG00000034032	ProperStrand	96	chr4	131908242	131908332	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.8099
chr19	16055554	16055644	protein_coding	Cep78	intron	ENSMUSG00000041491	ProperStrand	8	chr10	62341149	62341229	protein_coding	Tet1	exon	ENSMUSG00000047146	ProperStrand	286	1	-14.3202
chr17	63336769	63336859	LINE	Lx9	L1	chr17Lx963336627	NonProperStrand	1	chr17	63336935	63337025	Simple_repeat	(TG)n	Simple_repeat	chr17(TG)n63336930	ProperStrand	1	1	-inf
chr2	167836657	167836685	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-7.8047
chr13	101541067	101541090	protein_coding	Cenph	intron	ENSMUSG00000045273	NonProperStrand	45	chr9	120039581	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	3	-9.4658
chr18	75160712	75160778	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	chr19	8799021	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	2	-3.6805
chr7	53089954	53089976	protein_coding	Grin2d	intron	ENSMUSG00000002771	NonProperStrand	31	chr3	88727683	88727699	protein_coding	Dap3	utr3	ENSMUSG00000068921	ProperStrand	58	1	-14.7108
chr12	77404884	77408214	protein_coding	Mthfd1	exon	ENSMUSG00000021048	ProperStrand	71	chrX	34622974	34623023	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-2.8703
chr4	117907653	117907674	protein_coding	Ptprf	exon	ENSMUSG00000033295	ProperStrand	337	chr11	68887018	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-1.2347
chr6	134713006	134713086	protein_coding	Dusp16	intron	ENSMUSG00000030203	ProperStrand	27	chr7	125285306	125286781	protein_coding	Smg1	exon	ENSMUSG00000030655	ProperStrand	70	1	-14.6204
chr12	34736908	34736925	protein_coding	Hdac9	utr3	ENSMUSG00000004698	NonProperStrand	25	chr4	131908710	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	7	-18.5115
chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	chr18	74032746	74032764	protein_coding	Mro	intron	ENSMUSG00000064036	NonProperStrand	5	1	-13.6682
chr1	173433179	173433239	protein_coding	B930036N10Rik	utr3	ENSMUSG00000091993	ProperStrand	150	chr4	131865414	131865504	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	4	-8.5883
chr6	115757992	115758108	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr19	8800377	8800482	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	25	-6.2522
chr10	30226540	30226620	Simple_repeat	(GAAA)n	Simple_repeat	chr10(GAAA)n30226550	NonProperStrand	1	chr10	30226362	30226452	Simple_repeat	(GGAA)n	Simple_repeat	chr10(GGAA)n30226273	NonProperStrand	1	1	-inf
chr5	149142189	149142282	protein_coding	Slc7a1	utr3	ENSMUSG00000041313	ProperStrand	65	chr3	123210854	123210880	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.9374
chr4	129407403	129407484	protein_coding-noncoding	Khdrbs1	utr3	ENSMUSG00000028790	ProperStrand	4	chr1	63225625	63225705	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	4	-inf
chrX	7182489	7182506	protein_coding	Ccdc22	utr5	ENSMUSG00000031143	NonProperStrand	51	chr1	63225253	63225273	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	1	-9.1624
chr2	130103437	130103501	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	chr19	8798740	8798808	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	2	-1.2482
chr11	6519815	6519905	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	chr9	15119287	15119367	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	4	-3.5483
chr8	72974236	72974252	protein_coding	Klhl26	utr3	ENSMUSG00000055707	NonProperStrand	5	chr2	150784506	150784594	protein_coding	Ninl	exon	ENSMUSG00000068115	ProperStrand	51	2	-inf
chr17	23957631	23957744	protein_coding	Srrm2	utr3	ENSMUSG00000039218	ProperStrand	521	chr15	71624765	71624796	snoRNA	ENSMUSG00000088895_SNORA81	.	ENSMUSG00000088895	ProperStrand	348	1	-5.5082
chr14	19102855	19102939	protein_coding	Rpl15	exon	ENSMUSG00000012405	ProperStrand	145	chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	1	-7.0706
chr5	65136119	65136136	LTR	ORR1D2-int	MaLR	chr5ORR1D2-int65135280	ProperStrand	30	chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-7.8385
chr7	150256686	150256703	protein_coding	Trpm5	intron	ENSMUSG00000009246	ProperStrand	2	chr6	71832629	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-13.0331
chr2	164226383	164226400	protein_coding	Matn4	exon	ENSMUSG00000016995	ProperStrand	15	chr4	131866217	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-6.3678
chr11	60527749	60527839	protein_coding	Flii	utr3	ENSMUSG00000002812	ProperStrand	42	chr9	120039538	120039624	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	4	-13.0176
chr2	158184121	158184201	snoRNA	ENSMUSG00000064995_SNORA71	.	ENSMUSG00000064995	ProperStrand	430	chr11	116938586	116938676	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-2.4749
chr12	58643587	58643606	protein_coding	Foxa1	exon	ENSMUSG00000035451	ProperStrand	25	chr2	91436228	91436309	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	4	-21.1105
chr4	140277073	140277115	protein_coding	Rcc2	exon	ENSMUSG00000040945	ProperStrand	228	chr9	15119288	15119394	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	10	-inf
chr11	115657707	115658057	protein_coding	2310067B10Rik	exon	ENSMUSG00000020747	ProperStrand	74	chr19	8963096	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.9326
chr19	10128537	10128554	protein_coding	Fads3	exon	ENSMUSG00000024664	ProperStrand	1	chr9	120039533	120039616	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-inf
chr8	98241983	98242160	protein_coding	Setd6	exon	ENSMUSG00000031671	ProperStrand	35	chr1	162967504	162967572	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.4897
chr7	26076274	26076481	protein_coding	Cic	exon	ENSMUSG00000005442	ProperStrand	80	chr16	23111389	23111449	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.8895
chr8	77650232	77651143	protein_coding	Mcm5	exon	ENSMUSG00000005410	ProperStrand	199	chr4	116827119	116827185	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-4.6961
mmu-miR-1949	8	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr16	18777110	18777196	protein_coding	Cldn5	exon	ENSMUSG00000041378	ProperStrand	2	1	-15.6039
chr3	34624123	34624173	SINE	B1F	Alu	chr3B1F34624113	NonProperStrand	3	chr1	174052043	174052083	protein_coding	Copa	utr3	ENSMUSG00000026553	ProperStrand	33	2	-19.6593
chr12	77681715	77681731	protein_coding	Spnb1	utr3	ENSMUSG00000021061	NonProperStrand	37	chr8	73419745	73419775	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.0248
chr2	90235298	90235340	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	45450216	45450282	protein_coding	Btrc	intron	ENSMUSG00000025217	ProperStrand	14	1	-7.3487
chr5	33631129	33631149	LTR	RLTR20D	ERVK	chr5RLTR20D33631092	NonProperStrand	1	chr17	35089182	35089253	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-inf
chr5	23155489	23155570	protein_coding	Srpk2	intron	ENSMUSG00000062604	ProperStrand	51	chr18	35714145	35714235	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	10	-inf
chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-8.4510
chr19	8783779	8783848	protein_coding	Slc3a2	exon	ENSMUSG00000010095	ProperStrand	63	chr16	23110965	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-0.7310
chr6	125118045	125118136	protein_coding	Ncapd2	utr3	ENSMUSG00000038252	ProperStrand	170	chr19	8799849	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	6	-16.1669
chr7	114723399	114723417	protein_coding	Olfml1	intron	ENSMUSG00000051041	NonProperStrand	3	chr10	39978312	39978371	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	2	-20.0066
chr7	26030284	26030356	protein_coding	Erf	exon	ENSMUSG00000040857	NonProperStrand	3	chr5	135853906	135854006	protein_coding	Pom121	utr3	ENSMUSG00000053293	NonProperStrand	94	1	-18.3984
chr8	34994916	34995006	protein_coding	Rbpms	intron	ENSMUSG00000031586	ProperStrand	58	chr9	15118322	15118360	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.5290
chr19	8894893	8894993	protein_coding	Hnrnpul2	exon	ENSMUSG00000071659	ProperStrand	93	chr19	8800421	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-2.7423
chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	chr11	62416951	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-2.9852
chr14	96988095	96988179	snoRNA	ENSMUSG00000064581_SNORA30	.	ENSMUSG00000064581	ProperStrand	146	chr9	15119650	15119740	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	4	-5.3650
chr12	112215557	112215574	protein_coding	Ankrd9	exon	ENSMUSG00000037904	ProperStrand	46	chr7	52382753	52382832	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-7.2808
chr2	131880144	131880234	protein_coding	Slc23a2	utr3	ENSMUSG00000027340	ProperStrand	44	chr4	131866155	131866235	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-4.2484
chr7	123476727	123476771	snoRNA	ENSMUSG00000064741_Snord14a	.	ENSMUSG00000064741	ProperStrand	83	chr14	76247765	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-3.5656
chr14	102066247	102066280	protein_coding	Uchl3	exon	ENSMUSG00000022111	ProperStrand	12	chr18	33954906	33954947	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-10.8553
chr7	52135335	52135395	protein_coding	Med25	exon	ENSMUSG00000002968	ProperStrand	33	chr10	23505152	23505179	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.1417
chr4	53554189	53554269	protein_coding	Slc44a1	exon	ENSMUSG00000028412	ProperStrand	38	chr14	76247751	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-5.0499
chrX	138147584	138147600	protein_coding	Irs4	utr3	ENSMUSG00000054667	ProperStrand	24	chr7	52381972	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	2	-13.6386
chr9	106784531	106784621	protein_coding	Rbm15b	utr5	ENSMUSG00000074102	ProperStrand	9	chr17	24856619	24856699	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-10.2892
chr10	25726587	25726603	protein_coding	Tmem200a	intron	ENSMUSG00000092001	ProperStrand	19	chr1	89681355	89681396	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-7.7341
chr18	35063731	35063747	protein_coding	Etf1	utr3	ENSMUSG00000024360	ProperStrand	74	chr2	31924012	31924028	protein_coding	Fam78a	utr3	ENSMUSG00000050592	NonProperStrand	340	1	-9.4169
chr4	154596716	154596745	Low_complexity	C-rich	Low_complexity	chr4C-rich154596640	NonProperStrand	1	chr4	80966366	80966382	protein_coding	Mpdz	exon	ENSMUSG00000028402	ProperStrand	21	1	-inf
chr13	51743566	51743661	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	chr2	26768378	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	3	-1.6441
chr7	134671420	134671520	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	chr2	130101262	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	3	-4.6319
chr1	152231432	152231449	protein_coding-noncoding	BC003331	utr3	ENSMUSG00000006010	NonProperStrand	6	chr15	79912935	79912961	protein_coding	Rpl3	exon	ENSMUSG00000060036	ProperStrand	8342	1	-8.2103
chr13	55423311	55423337	protein_coding	Rab24	utr5	ENSMUSG00000034789	ProperStrand	5	chr11	97642990	97643090	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-7.3581
chr7	73254574	73254591	protein_coding	Chsy1	utr5	ENSMUSG00000032640	ProperStrand	25	chr10	23505149	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.6150
chr7	86047518	86047586	protein_coding	Aen	exon	ENSMUSG00000030609	ProperStrand	17	chr4	131866217	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-6.1146
chr2	158185529	158185666	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr11	69483136	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	33	-11.0456
chr7	29136571	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	chr11	106874193	106874233	tRNA	tRNA945-ArgCCG	.	1428105	ProperStrand	133	1	-1.1523
chr7	52958453	52958469	protein_coding	Car11	exon	ENSMUSG00000003273	NonProperStrand	250	chr4	45040376	45040426	protein_coding	Polr1e	intron	ENSMUSG00000028318	ProperStrand	6	1	-15.1952
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr5	136265080	136265100	protein_coding	Mdh2	exon	ENSMUSG00000019179	ProperStrand	50	2	-8.7199
chr11	53145130	53145158	protein_coding	Zcchc10	intron	ENSMUSG00000018239	ProperStrand	5	chr17	35272404	35273085	protein_coding	Bag6	utr5	ENSMUSG00000024392	ProperStrand	181	1	-16.2577
chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	chr5	108336377	108336418	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-1.2233
chr10	85355916	85355943	protein_coding	Prdm4	exon	ENSMUSG00000035529	ProperStrand	11	chr16	23110984	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.6241
chr2	90857789	90857805	protein_coding	Celf1	utr3	ENSMUSG00000005506	NonProperStrand	28	chr9	15119968	15120028	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-8.7833
chr11	78029742	78029842	protein_coding	Supt6h	exon	ENSMUSG00000002052	ProperStrand	119	chr11	69481355	69481433	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-2.0235
chr9	120483287	120483387	protein_coding	Rpl14	exon	ENSMUSG00000025794	ProperStrand	123	chr1	162965562	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.0377
chr3	40755217	40755233	protein_coding	Larp1b	intron	ENSMUSG00000037814	ProperStrand	29	chr16	23111448	23111503	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.3903
chr6	125171803	125171820	protein_coding	Vamp1	utr3	ENSMUSG00000030337	NonProperStrand	1	chrX	7182489	7182506	protein_coding	Ccdc22	utr5	ENSMUSG00000031143	NonProperStrand	51	1	-inf
chr4	154927524	154927624	protein_coding	Gnb1	exon	ENSMUSG00000029064	ProperStrand	69	chr1	162965535	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.0243
chr4	122970393	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	chr15	34370545	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	8	-2.6549
chr4	120403194	120403284	protein_coding	Kcnq4	intron	ENSMUSG00000028631	ProperStrand	5	chr5	135999365	135999445	protein_coding	Hip1	intron	ENSMUSG00000039959	NonProperStrand	23	1	-18.8987
chr18	61327074	61327090	protein_coding	Hmgxb3	exon	ENSMUSG00000024622	NonProperStrand	1	chr19	23968401	23968417	protein_coding	Apba1	exon	ENSMUSG00000024897	NonProperStrand	12	1	-inf
chr11	28889309	28889328	LTR	ORR1A2	MaLR	chr11ORR1A228889132	ProperStrand	1	chr4	131908694	131908749	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-inf
chr2	25876786	25876815	protein_coding	Ubac1	intron	ENSMUSG00000036352	ProperStrand	25	chr8	73419657	73419727	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-7.9475
chr2	121949510	121949528	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	chr15	34370542	34370666	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-2.1493
chr2	119430543	119430633	lincRNA	1700020I14Rik	exon	ENSMUSG00000085438	ProperStrand	15	chr1	72272872	72272952	snRNA	ENSMUSG00000075752_U2	.	ENSMUSG00000075752	ProperStrand	535	1	-11.7512
chrX	72214248	72214264	protein_coding-noncoding	Gab3	utr3	ENSMUSG00000032750	ProperStrand	420	chr1	145626056	145626084	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-4.9916
chr7	148633835	148633925	protein_coding	Rplp2	exon	ENSMUSG00000025508	ProperStrand	106	chr1	72896147	72896227	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	1	-8.3448
chr7	133520549	133520566	protein_coding	Spns1	exon	ENSMUSG00000030741	NonProperStrand	16	chr2	130102055	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	2	-12.8438
chr17	81463377	81463437	protein_coding	Thumpd2	intron	ENSMUSG00000024246	ProperStrand	8	chr4	131865947	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.4974
chrX	105190993	105191010	LTR	RLTR9E	ERVK	chrXRLTR9E105190921	NonProperStrand	20	chr4	140121137	140121153	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	1	-13.8990
chrX	98612296	98613659	protein_coding	Zmym3	exon	ENSMUSG00000031310	ProperStrand	17	chr16	23110965	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.8783
chr7	94509249	94509266	protein_coding	Nox4	exon	ENSMUSG00000030562	NonProperStrand	1	chr16	23110454	23110528	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-inf
chr1	133252350	133252451	protein_coding	Srgap2	intron	ENSMUSG00000026425	ProperStrand	299	chr11	62416977	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	3	-7.6283
chr8	74146668	74146992	protein_coding	Glt25d1	exon	ENSMUSG00000034807	ProperStrand	36	chr17	35299543	35299633	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-5.7741
chr9	78023109	78023179	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr8	122048446	122049314	protein_coding	Mbtps1	exon	ENSMUSG00000031835	ProperStrand	81	1	-5.2911
chr2	179912320	179912500	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr4	131866160	131866240	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-0.8136
chr7	53154979	53155001	protein_coding	Tmem143	intron	ENSMUSG00000002781	ProperStrand	9	chrX	148701183	148701398	protein_coding	Kdm5c	exon	ENSMUSG00000025332	ProperStrand	139	6	-19.6392
chr4	131866157	131866266	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	chr13	96100566	96100694	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	4	-1.3617
chrX	149828130	149828146	protein_coding	Klf8	utr3	ENSMUSG00000041649	NonProperStrand	107	chr11	62416599	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-4.0595
chr1	173932346	173932395	protein_coding	Vangl2	utr3	ENSMUSG00000026556	ProperStrand	37	chr4	131865856	131865946	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	6	-14.9103
chr19	36694569	36694586	lincRNA	1500017E21Rik	exon	ENSMUSG00000087579	ProperStrand	11	chr16	23110883	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-7.2041
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr1	65262611	65262627	protein_coding	Pikfyve	exon	ENSMUSG00000025949	ProperStrand	59	1	-7.8287
chr11	102024195	102024240	protein_coding	Lsm12	utr3	ENSMUSG00000020922	ProperStrand	28	chr18	35102297	35102325	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-8.1148
chr15	84101740	84103943	protein_coding	Parvb	exon	ENSMUSG00000022438	ProperStrand	127	chr6	8029751	8030306	protein_coding	Col28a1	exon	ENSMUSG00000068794	ProperStrand	23	1	-13.7474
chr11	120209071	120209095	protein_coding	Actg1	exon	ENSMUSG00000062825	ProperStrand	178	chr7	25397593	25397611	protein_coding	Phldb3	exon	ENSMUSG00000074277	ProperStrand	25	1	-12.9023
chr18	58830884	58830964	protein_coding	Isoc1	exon	ENSMUSG00000024601	ProperStrand	1	chr8	32260334	32260424	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-inf
chr4	55431652	55431668	lincRNA	Gm12505	exon	ENSMUSG00000087070	ProperStrand	447	chr12	110892839	110892905	snoRNA	ENSMUSG00000064621_AF357355	.	ENSMUSG00000064621	ProperStrand	60	1	-9.2921
chr9	20946705	20946721	protein_coding	Cdc37	exon	ENSMUSG00000019471	ProperStrand	97	chr4	131826043	131826125	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	1	-8.2564
chr8	86535304	86535320	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	chr2	26493382	26493472	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	3	-5.7024
chr10	71327607	71327624	LINE	Lx9	L1	chr10Lx971327211	NonProperStrand	4	chr2	145076805	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-13.3910
chr3	96132424	96132514	snRNA	ENSMUSG00000075978_U1	.	ENSMUSG00000075978	ProperStrand	132	chr12	106269313	106269560	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	3	-7.0110
chr4	137773101	137773118	protein_coding	Hp1bp3	utr5	ENSMUSG00000028759	ProperStrand	21	chr6	71832550	71832652	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	4	-inf
chr11	106117501	106118201	protein_coding	Psmc5	utr5	ENSMUSG00000020708	ProperStrand	51	chr8	81337420	81337449	protein_coding	Lsm6	intron	ENSMUSG00000031683	ProperStrand	13	1	-16.8014
chr2	91059031	91074265	protein_coding	Ddb2	exon	ENSMUSG00000002109	ProperStrand	8	chr1	157411822	157414734	protein_coding	Acbd6	exon	ENSMUSG00000033701	ProperStrand	10	1	-19.4909
chr13	99124241	99124257	protein_coding	Foxd1	utr5	ENSMUSG00000078302	NonProperStrand	12	chr16	23110828	23110869	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.4686
chr7	31252212	31252302	protein_coding	Nphs1	intron	ENSMUSG00000006649	ProperStrand	22	chr16	23111390	23111470	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-7.5258
chr7	73317749	73317783	protein_coding	Chsy1	utr3	ENSMUSG00000032640	ProperStrand	25	chr2	26493369	26493469	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-8.9295
chr8	32270039	32270078	protein_coding	Mak16	utr3	ENSMUSG00000031578	ProperStrand	26	chr16	23110941	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.2392
chr12	55835614	55835704	snRNA	ENSMUSG00000075960_U1	.	ENSMUSG00000075960	ProperStrand	210	chr1	162965980	162965999	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-1.4910
chr8	87618081	87619083	protein_coding	Man2b1	exon	ENSMUSG00000005142	ProperStrand	27	chr19	8963027	8963081	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.6995
chr16	91658306	91658386	protein_coding	Son	exon	ENSMUSG00000022961	ProperStrand	59	chrX	71517869	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-6.5788
chrX	128094560	128094577	SINE	B1_Mus1	Alu	chrXB1_Mus1128094517	ProperStrand	4	chr11	84722945	84722961	protein_coding	Myo19	exon	ENSMUSG00000020527	ProperStrand	82	1	-18.1495
chr4	148800438	148800467	protein_coding	Ube4b	utr5	ENSMUSG00000028960	ProperStrand	66	chr5	118376503	118376519	protein_coding	Nos1	exon	ENSMUSG00000029361	NonProperStrand	237	1	-10.3672
chr15	79392908	79392928	protein_coding	Dmc1	utr3	ENSMUSG00000022429	ProperStrand	8	chr10	23505152	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-8.1135
chr6	149283953	149283969	protein_coding	2810474O19Rik	utr3	ENSMUSG00000032712	ProperStrand	70	chr8	129468783	129468868	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	2	-6.9076
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr3	108357258	108357363	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	5	-0.9365
chr13	73935900	73935941	protein_coding	Slc12a7	exon	ENSMUSG00000017756	ProperStrand	80	chr12	17552948	17552985	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	2	-7.5355
chr2	130109497	130109513	protein_coding	Idh3b	exon	ENSMUSG00000027406	ProperStrand	146	chr19	8799596	8799622	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-5.0248
chr3	97008789	97008871	protein_coding	Bcl9	exon	ENSMUSG00000038256	ProperStrand	94	chr7	117189942	117190032	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.5369
chr9	15119370	15119425	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	chr7	52382250	52382314	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-0.8766
chr8	112253253	112253343	protein_coding	Atxn1l	utr3	ENSMUSG00000069895	ProperStrand	13	chr11	69481353	69481433	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-6.1585
chr2	120872244	120872260	protein_coding	Tgm5	exon	ENSMUSG00000053675	NonProperStrand	163	chr15	34370614	34370678	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-1.8286
chr12	70413651	70415416	protein_coding	Nemf	exon	ENSMUSG00000020982	ProperStrand	77	chr15	79908930	79908955	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-4.9878
chr19	43928656	43928735	protein_coding	Dnmbp	exon	ENSMUSG00000025195	ProperStrand	15	chr5	130300460	130300550	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-12.2292
chr7	52378401	52378460	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	chr15	79908939	79908984	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-1.2573
chr4	125806142	125806204	protein_coding	Stk40	exon	ENSMUSG00000042608	ProperStrand	32	chr2	32818889	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	6	-inf
chr8	73419657	73419757	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	chr14	31829399	31829467	snoRNA	ENSMUSG00000077797_Snord19	.	ENSMUSG00000077797	ProperStrand	62	7	-inf
chr17	45705450	45705835	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr8	13416895	13416912	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-0.7694
chr12	17284042	17290087	protein_coding	Pdia6	exon	ENSMUSG00000020571	ProperStrand	114	chr18	35716787	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	16	-19.9322
chr14	65372856	65372889	snoRNA	ENSMUSG00000064442_SNORA36	.	ENSMUSG00000064442	ProperStrand	296	chr11	6428099	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-0.7575
chr11	60370927	60370943	protein_coding	Alkbh5	utr3	ENSMUSG00000042650	ProperStrand	203	chr11	62416600	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-5.0040
chr4	52795883	52795901	LINE	L1_Mur2	L1	chr4L1_Mur252795094	NonProperStrand	1	chr5	121655016	121655059	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-inf
chr5	148113281	148113297	protein_coding	Cdx2	utr3	ENSMUSG00000029646	ProperStrand	276	chr14	66607061	66607103	protein_coding	Gulo	exon	ENSMUSG00000034450	ProperStrand	2	1	-18.0422
chr15	5192334	5192350	protein_coding	Ptger4	exon	ENSMUSG00000039942	ProperStrand	2	chr16	23111447	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-8.0851
chr8	74008400	74008417	protein_coding	Ano8	exon	ENSMUSG00000034863	NonProperStrand	171	chr11	87240282	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	3	-19.3615
chr11	78199404	78199422	protein_coding	Foxn1	intron	ENSMUSG00000002057	NonProperStrand	5	chr6	122662731	122663214	protein_coding	Nanog	exon	ENSMUSG00000012396	ProperStrand	66	1	-18.0400
chr10	67139099	67139189	SINE	B2_Mm2	B2	chr10B2_Mm267139021	ProperStrand	1	chr7	90500428	90500518	SINE	B3	B2	chr7B390500454	ProperStrand	1	1	-inf
chr8	64017614	64028377	protein_coding	Palld	exon	ENSMUSG00000058056	NonProperStrand	125	chr11	69483136	69483233	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-2.4877
chr9	26440743	26440759	DNA	MER5A	MER1_type	chr9MER5A26440741	ProperStrand	108	chr2	133378813	133378830	protein_coding	Bmp2	utr5	ENSMUSG00000027358	NonProperStrand	17	1	-14.7008
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr5	130300439	130300554	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	7	-2.6826
chr11	77974908	77975025	protein_coding	Traf4	exon	ENSMUSG00000017386	ProperStrand	34	chr14	56451347	56451363	protein_coding	Nfatc4	exon	ENSMUSG00000023411	NonProperStrand	1	1	-inf
chr11	33470442	33470542	protein_coding	Gabrp	intron	ENSMUSG00000020159	NonProperStrand	11	chr17	71990955	71990998	snoRNA	ENSMUSG00000092713_CT010429.1	.	ENSMUSG00000092713	ProperStrand	182	1	-14.5484
chr17	12896240	12896340	protein_coding	Igf2r	exon	ENSMUSG00000023830	ProperStrand	151	chr11	97642952	97643014	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.0694
chr14	12567614	12567671	protein_coding	Ptprg	intron	ENSMUSG00000021745	ProperStrand	72	chrX	84664518	84664534	protein_coding	Il1rapl1	exon	ENSMUSG00000052372	NonProperStrand	755	1	-7.8846
chr13	38070159	38070203	protein_coding	Ssr1	utr3	ENSMUSG00000021427	ProperStrand	65	chr1	120574744	120574806	protein_coding	Tfcp2l1	utr3	ENSMUSG00000026380	ProperStrand	158	2	-17.5440
chr10	127152705	127152721	protein_coding	Myo1a	exon	ENSMUSG00000025401	ProperStrand	93	chr14	76247753	76247785	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-3.3572
chr16	85010684	85010705	protein_coding	App	intron	ENSMUSG00000022892	NonProperStrand	101	chr1	64783877	64783906	protein_coding	Fzd5	utr5	ENSMUSG00000045005	ProperStrand	175	1	-10.1197
chr9	78023119	78023149	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr5	138745815	138745915	protein_coding	Stag3	exon	ENSMUSG00000036928	ProperStrand	53	1	-6.1222
chr4	120397372	120397462	protein_coding	Kcnq4	intron	ENSMUSG00000028631	NonProperStrand	4	chr9	108571637	108571727	protein_coding	Slc25a20	intron	ENSMUSG00000032602	ProperStrand	5	1	-20.6224
chr16	62834354	62834402	protein_coding	Arl13b	intron	ENSMUSG00000022911	ProperStrand	4	chr12	17552975	17553065	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-10.7041
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr2	166890502	166890552	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-1.7158
chr13	93209562	93209578	protein_coding	Ankrd34b	exon	ENSMUSG00000045034	NonProperStrand	28	chr11	106362304	106362341	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-7.3584
chr9	109990430	109990525	protein_coding	Dhx30	exon	ENSMUSG00000032480	ProperStrand	29	chr1	192712615	192712631	protein_coding	Rps6kc1	exon	ENSMUSG00000089872	ProperStrand	241	1	-11.9957
chr14	33157527	33157582	protein_coding	Ogdhl	exon	ENSMUSG00000021913	ProperStrand	182	chr9	83678799	83681879	protein_coding	Elovl4	exon	ENSMUSG00000032262	ProperStrand	159	1	-9.1337
chr19	4097695	4097858	protein_coding	Cdk2ap2	exon	ENSMUSG00000024856	ProperStrand	2	chr2	26494708	26494798	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-10.3719
chr15	64143850	64143867	protein_coding	Asap1	intron	ENSMUSG00000022377	ProperStrand	29	chr7	16524164	16524219	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	1	-11.1872
chr10	126747559	126747575	protein_coding	Mars	exon	ENSMUSG00000040354	NonProperStrand	3	chr19	8963027	8963083	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-8.3179
chr11	49966197	49966213	protein_coding	Tbc1d9b	exon	ENSMUSG00000036644	ProperStrand	27	chr4	131908270	131908295	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.7097
chr5	120594022	120594093	protein_coding	Rbm19	exon	ENSMUSG00000029594	ProperStrand	40	chr6	70794802	70794819	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	1	-12.2403
chr13	22098354	22098371	protein_coding	Prss16	intron	ENSMUSG00000006179	ProperStrand	78	chr18	33954827	33954861	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-3.0294
chr7	134341340	134341357	protein_coding	Tbc1d10b	utr3	ENSMUSG00000042492	ProperStrand	187	chr4	116828379	116828453	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-6.1278
chr12	60141344	60141510	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	chr1	162965529	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	12	-2.8553
chr7	142908077	142908096	Simple_repeat	(CCCCG)n	Simple_repeat	chr7(CCCCG)n142908017	NonProperStrand	5	chr7	134920636	134920655	protein_coding	Setd1a	utr5	ENSMUSG00000042308	NonProperStrand	5	1	-19.0779
chr10	79281476	79281508	protein_coding	Palm	intron	ENSMUSG00000035863	ProperStrand	58	chr4	138576794	138576810	protein_coding	Tmco4	exon	ENSMUSG00000041143	ProperStrand	47	1	-13.8822
chr15	98676750	98676829	protein_coding	Mll2	exon	ENSMUSG00000048154	ProperStrand	170	chr18	35714183	35714282	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	3	-4.7679
chr7	121972560	121972578	protein_coding	Insc	exon	ENSMUSG00000048782	ProperStrand	9	chr14	76247753	76247822	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-7.9615
chr4	56851839	56851870	protein_coding	Ctnnal1	exon	ENSMUSG00000038816	ProperStrand	18	chr4	131865390	131865480	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-6.3553
chr16	17452420	17452437	protein_coding	Crkl	utr5	ENSMUSG00000006134	ProperStrand	43	chr5	108336363	108336409	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-5.5297
chr11	49464750	49464840	protein_coding	Flt4	utr3	ENSMUSG00000020357	ProperStrand	37	chr17	24857750	24857832	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	21	-19.0816
chr2	168590618	168590708	protein_coding	Sall4	utr5	ENSMUSG00000027547	ProperStrand	82	chr9	120039585	120039665	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	3	-7.1489
chr7	134671389	134671469	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	chr1	39605591	39605681	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-2.2220
chr11	51551273	51551298	protein_coding	Sec24a	intron	ENSMUSG00000036391	ProperStrand	42	chr11	51551299	51551424	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	6	-20.2478
chr17	45702799	45704113	protein_coding	Slc35b2	utr3	ENSMUSG00000037089	ProperStrand	55	chr16	23110463	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	8	-18.9655
chr10	75844775	75844865	protein_coding	Pcnt	exon	ENSMUSG00000001151	ProperStrand	127	chr16	23111373	23111454	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-1.6871
chr9	96976853	96976923	protein_coding	Slc25a36	utr3	ENSMUSG00000032449	ProperStrand	159	chr4	53873626	53873644	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	1	-7.1025
chr1	172993122	172993139	protein_coding	Fcgr3	intron	ENSMUSG00000059498	ProperStrand	44	chr6	71832640	71832687	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-6.2218
chr10	98592215	98592265	protein_coding	Poc1b	exon	ENSMUSG00000019952	ProperStrand	6	chr11	69481332	69481383	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	6	-inf
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr15	79362112	79362129	protein_coding	Ddx17	exon	ENSMUSG00000055065	ProperStrand	140	1	-6.2938
chr15	78920303	78920380	protein_coding	Eif3l	exon	ENSMUSG00000033047	ProperStrand	81	chr19	8800353	8800443	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-2.9858
chr11	117729369	117729386	protein_coding	Tha1	utr3	ENSMUSG00000017713	NonProperStrand	56	chr19	8963027	8963083	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.3909
chr17	95160910	95218243	Satellite	MMSAT4	Satellite	chr17MMSAT495216724	NonProperStrand	14	chr5	121655016	121655095	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-6.5960
chr11	94495959	94496257	protein_coding	Lrrc59	exon	ENSMUSG00000020869	ProperStrand	115	chr7	29136522	29136602	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.3507
chr17	32453268	32453285	protein_coding	Akap8	exon	ENSMUSG00000024045	ProperStrand	339	chr11	77996576	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	2	-4.9008
chr15	102295478	102295562	lincRNA	Gm17403	intron	ENSMUSG00000090630	NonProperStrand	10	chr16	23110974	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.7978
chr13	24563276	24563328	protein_coding	Cmah	utr3	ENSMUSG00000016756	NonProperStrand	53	chr19	8800361	8800453	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	7	-inf
chr14	25012066	25012118	protein_coding	Dlg5	exon	ENSMUSG00000021782	ProperStrand	46	chr13	49779747	49779802	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-7.5433
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr10	90581034	90581127	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	2	-2.6077
chr17	88377660	88385622	protein_coding	Msh6	exon	ENSMUSG00000005370	ProperStrand	150	chr4	131908236	131908354	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-1.5613
chr18	66143833	66143923	protein_coding	Lman1	exon	ENSMUSG00000041891	ProperStrand	36	chr4	131908264	131908344	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.2156
chr19	8800376	8800453	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	NonProperStrand	18	chr15	98350184	98350274	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	NonProperStrand	9	2	-19.4587
chr13	44997853	44997909	protein_coding	Jarid2	exon	ENSMUSG00000038518	ProperStrand	372	chr2	118611946	118611962	protein_coding	Disp2	exon	ENSMUSG00000040035	NonProperStrand	204	1	-7.2172
chr7	54105677	54110742	protein_coding	Ldha	utr3	ENSMUSG00000063229	ProperStrand	280	chr11	116938557	116938650	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	2	-5.5211
chr12	8505882	8505982	protein_coding	Rhob	exon	ENSMUSG00000054364	ProperStrand	10	chr7	117189944	117190015	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-11.1719
chr11	69486970	69487060	protein_coding	Senp3	utr3	ENSMUSG00000005204	ProperStrand	65	chr4	3762227	3762276	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	1	-9.3281
chr6	115061846	115061936	LINE	L1M5	L1	chr6L1M5115061844	NonProperStrand	1	chr6	115061680	115061760	LTR	MTD	MaLR	chr6MTD115061451	ProperStrand	1	1	-inf
chr2	3371530	3371620	protein_coding	Dclre1c	intron	ENSMUSG00000026648	NonProperStrand	4	chr4	11338891	11338971	protein_coding	Gm17283	intron	ENSMUSG00000067549	ProperStrand	1	1	-inf
chr12	58691976	58691992	antisense	4921518K17Rik	.	ENSMUSG00000085851	ProperStrand	75	chr14	76247711	76247740	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-3.7532
chr3	122558730	122558797	protein_coding	Pde5a	utr3	ENSMUSG00000053965	ProperStrand	6	chr18	35716734	35716824	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-6.6008
chrX	12264319	12266462	protein_coding	Med14	exon	ENSMUSG00000064127	NonProperStrand	22	chr9	120038547	120038670	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.9307
chr15	82052775	82052803	protein_coding	Tnfrsf13c	utr3	ENSMUSG00000068105	NonProperStrand	4	chr18	35714197	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-8.9582
chr2	131005220	131005236	protein_coding	Cenpb	exon	ENSMUSG00000068267	NonProperStrand	38	chr4	131908810	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.9012
chr7	135922687	135922734	protein_coding	Sec23ip	exon	ENSMUSG00000055319	ProperStrand	27	chr1	162966827	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-7.8536
chr1	43872323	43872384	protein_coding	Uxs1	intron	ENSMUSG00000057363	ProperStrand	9	chr3	123210924	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.6210
chr9	72327572	72327606	protein_coding	Tex9	intron	ENSMUSG00000032219	ProperStrand	3	chr16	23111372	23111462	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-6.9982
chr15	103145425	103145515	protein_coding	Zfp385a	exon	ENSMUSG00000000552	ProperStrand	9	chr1	89681247	89681327	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-9.2815
chr13	23392049	23392066	lincRNA	4930557F10Rik	intron	ENSMUSG00000085488	NonProperStrand	51	chr2	32818840	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	2	-9.4460
chr4	40132019	40133377	protein_coding	Aco1	exon	ENSMUSG00000028405	ProperStrand	25	chr9	120039587	120039626	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-4.9793
chr8	44389792	44389886	protein_coding	Zfp42	utr5	ENSMUSG00000051176	ProperStrand	127	chr16	23110528	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-3.8997
chr15	99146295	99146571	protein_coding	Prpf40b	exon	ENSMUSG00000023007	ProperStrand	5	chr11	69481383	69481463	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-8.1843
chr1	36868836	36868946	protein_coding	Tmem131	intron	ENSMUSG00000026116	ProperStrand	129	chr15	5068442	5068480	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-4.5804
chr10	66481334	66502256	protein_coding	Reep3	exon	ENSMUSG00000019873	ProperStrand	11	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-4.7202
chrX	12742561	12743779	protein_coding	Usp9x	exon	ENSMUSG00000031010	ProperStrand	174	chr18	74938045	74938145	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	ProperStrand	1022	3	-12.8645
chr2	73166930	73166947	protein_coding	Scrn3	intron	ENSMUSG00000008226	NonProperStrand	22	chr2	62510370	62510402	protein_coding	Gca	exon	ENSMUSG00000026893	ProperStrand	8	1	-18.6015
chr14	55086304	55086370	protein_coding	Lrp10	exon	ENSMUSG00000022175	ProperStrand	19	chr19	8799858	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-7.2272
chr11	64315835	64315857	protein_coding	Hs3st3a1	intron	ENSMUSG00000047759	ProperStrand	4	chr15	88930021	88930076	protein_coding	Tubgcp6	utr3	ENSMUSG00000051786	ProperStrand	15	1	-21.2797
chr14	56330940	56331017	protein_coding	Tgm1	exon	ENSMUSG00000022218	ProperStrand	12	chr16	23110965	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.4686
chr13	81720736	81738355	protein_coding	Gpr98	exon	ENSMUSG00000069170	ProperStrand	16	chr18	35716835	35716883	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	5	-19.0390
chr2	103574616	103574679	protein_coding	Nat10	exon	ENSMUSG00000027185	ProperStrand	124	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.1738
chr3	146121747	146121802	protein_coding	Ctbs	exon	ENSMUSG00000028189	ProperStrand	6	chr17	35089181	35089237	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	3	-19.2343
chr4	46128585	46128647	protein_coding	Tstd2	utr3	ENSMUSG00000035495	ProperStrand	10	chr19	8799036	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-9.4608
chr2	130101986	130102106	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	chr14	33005094	33005214	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	13	-1.3871
chr17	24708534	24708588	protein_coding	Pkd1	exon	ENSMUSG00000032855	ProperStrand	61	chr9	78327837	78327897	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-6.3016
chr13	37640223	37640313	LTR	RMER10A	ERVL	chr13RMER10A37639925	ProperStrand	1	chr2	37671150	37671230	protein_coding	Dennd1a	intron	ENSMUSG00000035392	ProperStrand	24	1	-inf
chr7	86054622	86054705	protein_coding-noncoding	Aen	utr5	ENSMUSG00000030609	ProperStrand	2	chr4	134481298	134481334	protein_coding	D4Wsu53e	exon	ENSMUSG00000037266	ProperStrand	15	2	-inf
chr4	43505656	43505721	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr2	26767586	26767655	protein_coding	Rpl7a	exon	ENSMUSG00000062647	ProperStrand	234	3	-3.0727
chr15	81524069	81524085	protein_coding	Chadl	exon	ENSMUSG00000063765	ProperStrand	28	chr1	162965531	162965594	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.7132
chr3	54533831	54533872	protein_coding	Exosc8	intron	ENSMUSG00000027752	ProperStrand	8	chr12	17553035	17553088	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	2	-14.7180
chrX	157487394	157487414	LTR	MERVK26-int	ERVK	chrXMERVK26-int157486794	ProperStrand	1	chr7	116663633	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-inf
chr9	55890240	55890257	protein_coding	Rcn2	intron	ENSMUSG00000032320	ProperStrand	11	chr19	8963129	8963181	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.4574
chr1	184371775	184371846	protein_coding	Trp53bp2	exon	ENSMUSG00000026510	ProperStrand	19	chr10	23505163	23505253	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.1073
chr2	6845929	6845948	protein_coding	Celf2	intron	ENSMUSG00000002107	NonProperStrand	26	chr16	23110961	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.2392
chr1	162965983	162966095	non_coding	Gas5	.	ENSMUSG00000053332	ProperStrand	144	chr19	8963086	8963114	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-1.9462
chr5	89965286	89965313	protein_coding	Npffr2	intron	ENSMUSG00000035528	ProperStrand	4	chr11	6428055	6428105	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-14.3166
chr9	20946705	20946721	protein_coding	Cdc37	exon	ENSMUSG00000019471	ProperStrand	97	chr14	70009011	70009031	protein_coding	Loxl2	utr5	ENSMUSG00000034205	ProperStrand	28	1	-13.8919
chr13	74460517	74460582	protein_coding	Sdha	utr3	ENSMUSG00000021577	ProperStrand	70	chr17	45705295	45705385	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	1	-6.4248
mmu-miR-294-3p	0	17	miRNA	mmu-miR-294-3p	.	mmu-miR-294-3p	ProperStrand	35	chr16	23110845	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-7.6429
chr10	99619295	99619313	LINE	Lx3B	L1	chr10Lx3B99619090	ProperStrand	1	chr7	150255358	150255661	protein_coding	Tssc4	utr5	ENSMUSG00000045752	ProperStrand	13	1	-inf
chr5	66086587	66086605	protein_coding	Pds5a	intron	ENSMUSG00000029202	ProperStrand	62	chr10	23505148	23505215	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.1888
chr11	68629524	68629571	protein_coding	Myh10	utr3	ENSMUSG00000020900	ProperStrand	91	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-4.4099
chr2	156904813	156904949	protein_coding	9830001H06Rik	utr5	ENSMUSG00000055485	ProperStrand	26	chr2	66385173	66385189	protein_coding	Scn9a	exon	ENSMUSG00000075316	ProperStrand	58	1	-15.0665
chr4	48472775	48472835	protein_coding	Tex10	exon	ENSMUSG00000028345	ProperStrand	9	chr17	35089182	35089235	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-9.3268
chr4	151767924	151768399	protein_coding	Kcnab2	exon	ENSMUSG00000028931	ProperStrand	22	chr4	131908711	131908753	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.8292
chr13	12700785	12700805	protein_coding	Ero1lb	utr3	ENSMUSG00000057069	NonProperStrand	2	chr18	35716812	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-9.2832
chr3	88113183	88113199	protein_coding	Cct3	exon	ENSMUSG00000001416	ProperStrand	82	chr4	131865855	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.3075
chr7	53089954	53089975	protein_coding	Grin2d	intron	ENSMUSG00000002771	NonProperStrand	31	chr14	55476645	55476661	protein_coding	Homez	exon	ENSMUSG00000057156	NonProperStrand	127	1	-13.1436
chr15	102265135	102265174	protein_coding	Sp1	utr3	ENSMUSG00000001280	ProperStrand	124	chr11	62418018	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-4.1607
chr11	35935210	35935228	protein_coding	Odz2	intron	ENSMUSG00000049336	NonProperStrand	43	chr12	112779228	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-5.4233
chr2	156604763	156604780	protein_coding	Myl9	intron	ENSMUSG00000067818	NonProperStrand	2	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-8.7800
chr4	43505803	43505904	protein_coding	Ccdc107	intron	ENSMUSG00000028461	ProperStrand	69	chr6	67221262	67221282	protein_coding	Serbp1	exon	ENSMUSG00000036371	NonProperStrand	3	2	-inf
chr13	14098095	14106828	protein_coding-noncoding	Tbce	utr3	ENSMUSG00000039233	NonProperStrand	2	chr13	14097914	14106424	protein_coding	Tbce	intron	ENSMUSG00000039233	NonProperStrand	2	2	-inf
chr10	80618619	80619791	protein_coding	Pias4	exon	ENSMUSG00000004934	ProperStrand	43	chr3	157729963	157729979	protein_coding	Lrrc40	utr3	ENSMUSG00000063052	ProperStrand	147	1	-12.1879
chr4	118955409	118955467	protein_coding	Ybx1	exon	ENSMUSG00000028639	ProperStrand	171	chr17	24343586	24343602	protein_coding	Ntn3	exon	ENSMUSG00000079662	ProperStrand	237	1	-8.4623
chr5	31369979	31370485	protein_coding	Cad	exon	ENSMUSG00000013629	ProperStrand	260	chr7	118219704	118219727	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-3.0071
chr2	127036552	127036597	protein_coding	Snrnp200	exon	ENSMUSG00000003660	ProperStrand	203	chr10	80641694	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	1	-5.1508
chr9	110421561	110421578	protein_coding	Kif9	exon	ENSMUSG00000032489	ProperStrand	2	chr7	116663712	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-9.6916
chr11	4381371	4381436	protein_coding	Mtmr3	utr3	ENSMUSG00000034354	ProperStrand	25	chr18	36885433	36885449	protein_coding	Cd14	exon	ENSMUSG00000051439	ProperStrand	65	1	-14.9246
chr10	126622346	126622654	protein_coding	Arhgef25	exon	ENSMUSG00000019467	ProperStrand	12	chr7	4745734	4746049	protein_coding	Rpl28	exon	ENSMUSG00000030432	ProperStrand	220	1	-13.9956
chr3	82816757	82816774	protein_coding	Fgg	exon	ENSMUSG00000033860	NonProperStrand	321	chr1	89345703	89345743	protein_coding	Gigyf2	utr3	ENSMUSG00000048000	ProperStrand	128	1	-8.4358
chr4	45000187	45000204	protein_coding	Grhpr	exon	ENSMUSG00000035637	ProperStrand	35	chr10	23505152	23505220	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-3.7108
chr11	50445064	50445082	protein_coding	Adamts2	intron	ENSMUSG00000036545	NonProperStrand	5	chr5	23825941	23825957	protein_coding	Kcnh2	exon	ENSMUSG00000038319	ProperStrand	242	1	-15.6683
chr15	80086988	80087078	protein_coding	Atf4	intron	ENSMUSG00000042406	ProperStrand	6	chr8	73419684	73419764	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-7.7047
chr17	35183280	35183296	protein_coding	Msh5	exon	ENSMUSG00000007035	NonProperStrand	4	chr4	131908809	131908890	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-6.2660
chr7	29606924	29607004	protein_coding	Hnrnpl	utr3	ENSMUSG00000015165	ProperStrand	150	chr2	41199972	41199989	protein_coding	Lrp1b	exon	ENSMUSG00000049252	ProperStrand	376	3	-17.3396
chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	chr18	35716748	35716875	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-1.5286
chr11	3649570	3649587	protein_coding	Osbp2	intron	ENSMUSG00000020435	ProperStrand	60	chr11	51551341	51551424	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	1	-7.6994
chr8	98388423	98388508	protein_coding	Got2	utr3	ENSMUSG00000031672	ProperStrand	85	chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	1	-8.4903
chr12	85071546	85071562	protein_coding	Psen1	exon	ENSMUSG00000019969	ProperStrand	20	chr8	73419657	73419730	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-8.6287
chr10	80809668	80809684	protein_coding	Hmg20b	exon	ENSMUSG00000020232	ProperStrand	157	chr18	56868013	56868082	protein_coding	Lmnb1	exon	ENSMUSG00000024590	ProperStrand	176	2	-14.6114
chr7	118219575	118219603	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	chr1	59761635	59761674	snoRNA	ENSMUSG00000089093_Snord11	.	ENSMUSG00000089093	ProperStrand	193	1	-2.0913
chr7	151765212	151765228	antisense	Gm10574	.	ENSMUSG00000073778	ProperStrand	357	chr12	112779223	112779247	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-1.6285
chr15	80798123	80798167	protein_coding	Adsl	exon	ENSMUSG00000022407	ProperStrand	11	chr7	56556420	56556436	protein_coding	Nav2	intron	ENSMUSG00000052512	ProperStrand	106	1	-15.6435
chr11	87296657	87296721	protein_coding	Tex14	intron	ENSMUSG00000010342	ProperStrand	41	chr2	158182180	158182280	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	4	-17.5752
chr9	44628822	44655947	protein_coding	Mll1	exon	ENSMUSG00000002028	ProperStrand	151	chr17	24857715	24857805	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	6	-7.6936
chr15	27879153	27879223	protein_coding	Trio	intron	ENSMUSG00000022263	ProperStrand	108	chr7	118219574	118219649	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-3.0857
chr14	35487457	35487502	protein_coding	Wapal	utr5	ENSMUSG00000041408	ProperStrand	93	chr4	131865913	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-2.2125
chr2	165899808	165899881	protein_coding	Sulf2	utr3	ENSMUSG00000006800	ProperStrand	171	chr2	174259083	174259100	protein_coding	Ctsz	exon	ENSMUSG00000016256	ProperStrand	13	1	-14.3253
chr7	34992750	34992767	protein_coding	Gpi1	exon	ENSMUSG00000036427	NonProperStrand	40	chr12	106269284	106269337	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-4.9177
chr11	5688561	5691800	protein_coding	Dbnl	utr5	ENSMUSG00000020476	ProperStrand	16	chr3	123210861	123210941	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-4.4647
chr2	91771603	91771797	protein_coding	Mdk	utr5	ENSMUSG00000027239	ProperStrand	56	chr15	98350223	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-4.8936
chr4	131825994	131826125	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	chr7	29136553	29136633	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	4	-1.0027
chr5	118520394	118520474	protein_coding	Fbxw8	exon	ENSMUSG00000032867	ProperStrand	61	chr9	15119682	15119772	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.6010
mmu-miR-15b-5p	2	22	miRNA	mmu-miR-15b-5p	.	mmu-miR-15b-5p	ProperStrand	8	chr11	87240291	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	4	-20.9481
chr4	140121137	140121153	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	chr1	63225606	63225696	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-5.0654
chr9	114392692	114392782	LTR	MTEb	MaLR	chr9MTEb114392482	NonProperStrand	1	chr9	114393010	114393100	SINE	RSINE1	B4	chr9RSINE1114392973	NonProperStrand	1	1	-inf
chr16	8935831	8935921	LTR	ORR1D-int	MaLR	chr16ORR1D-int8935729	ProperStrand	1	chr5	110797091	110797181	protein_coding	Fbrsl1	intron	ENSMUSG00000043323	NonProperStrand	11	1	-inf
chr15	76554654	76554671	protein_coding	Arhgap39	utr3	ENSMUSG00000033697	ProperStrand	29	chr2	52813056	52813107	protein_coding	Fmnl2	intron	ENSMUSG00000036053	ProperStrand	35	1	-15.9086
chr18	35716807	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	chr6	70805471	70805574	snoRNA	ENSMUSG00000065750_SNORA5	.	ENSMUSG00000065750	ProperStrand	165	2	-1.5426
chr5	137806208	137806231	protein_coding	Ephb4	exon	ENSMUSG00000029710	ProperStrand	49	chr6	115758036	115758126	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-5.8692
chr12	12944235	12944251	protein_coding	Mycn	exon	ENSMUSG00000037169	NonProperStrand	109	chr2	32818870	32818934	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-4.3205
chr8	87784927	87784990	protein_coding	Vps35	utr3	ENSMUSG00000031696	ProperStrand	27	chr19	8800456	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-8.3573
chr1	94916492	94916572	protein_coding	Kif1a	exon	ENSMUSG00000014602	ProperStrand	18	chr16	23111453	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-8.3413
mmu-miR-6240	3	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr1	133061069	133061198	protein_coding	Eif2d	exon	ENSMUSG00000026427	ProperStrand	12	1	-9.1521
chr4	140121137	140121153	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	chr15	79913288	79913311	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.1557
chr17	35276011	35276223	protein_coding	Bag6	exon	ENSMUSG00000024392	ProperStrand	181	chr11	116938569	116938659	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-4.0287
chr6	13820663	13820680	protein_coding	2610001J05Rik	exon	ENSMUSG00000052419	NonProperStrand	13	chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-10.8459
chr13	73937838	73937918	protein_coding	Slc12a7	exon	ENSMUSG00000017756	ProperStrand	80	chr11	6428076	6428166	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.6817
chr19	6012623	6012639	protein_coding	Capn1	intron	ENSMUSG00000024942	ProperStrand	22	chr17	24665421	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	4	-20.5825
chr13	94268257	94268274	protein_coding	Jmy	exon	ENSMUSG00000021690	ProperStrand	16	chr7	108985967	108986020	protein_coding	Inppl1	intron	ENSMUSG00000032737	ProperStrand	272	1	-12.9707
chr2	127317007	127317024	protein_coding	Kcnip3	intron	ENSMUSG00000079056	NonProperStrand	18	chr2	26493442	26493494	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-6.0815
chr11	69559588	69559799	protein_coding	Polr2a	exon	ENSMUSG00000005198	ProperStrand	200	chr2	26494762	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-2.2739
chr2	75500763	75501742	protein_coding	Hnrnpa3	exon	ENSMUSG00000059005	ProperStrand	289	chr2	26494709	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-1.5108
chr2	125657899	125657939	protein_coding	Cops2	utr3	ENSMUSG00000027206	ProperStrand	10	chr3	51852326	51852343	protein_coding	Maml3	intron	ENSMUSG00000061143	ProperStrand	15	1	-20.6736
chr2	90235284	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	134780323	134780339	protein_coding	Crebl2	utr5	ENSMUSG00000032652	ProperStrand	41	1	-5.1984
chr8	112607452	112607470	protein_coding	Gm17720	intron	ENSMUSG00000091041	ProperStrand	14	chr9	15119631	15119680	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.3767
chr15	82980105	82980192	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr12	110923173	110923230	snoRNA	ENSMUSG00000084487_SNORD113	.	ENSMUSG00000084487	ProperStrand	183	1	-4.9529
chr4	43505724	43505824	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr1	173041600	173041649	tRNA	tRNA710-ValCAC	.	402950	ProperStrand	206	1	-1.1116
chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	chr1	102076758	102076790	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	1	-5.3783
chr11	116535914	116535980	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr8	74843721	74843821	protein_coding	Klf2	exon	ENSMUSG00000055148	ProperStrand	82	1	-5.2999
chr2	90235303	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr15	27662335	27662352	protein_coding	Trio	exon	ENSMUSG00000022263	NonProperStrand	20	1	-6.6233
chr11	57864329	57864380	protein_coding	Larp1	exon	ENSMUSG00000037331	ProperStrand	201	chr3	84995363	84995380	protein_coding	Arfip1	intron	ENSMUSG00000074513	NonProperStrand	56	1	-11.0271
chr8	98272906	98275698	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	chr8	113362431	113362461	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	1	-5.9747
chr6	108608536	108608573	lincRNA	0610040F04Rik	intron	ENSMUSG00000087341	ProperStrand	13	chr9	120037955	120038055	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-7.7542
chr16	13813202	13813220	protein_coding	Rrn3	exon	ENSMUSG00000022682	ProperStrand	58	chr8	73419657	73419707	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.1915
chr9	65404747	65404797	protein_coding	Plekho2	exon	ENSMUSG00000050721	ProperStrand	3	chr10	23505152	23505215	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-6.9610
chr10	108422465	108422481	protein_coding	Syt1	intron	ENSMUSG00000035864	NonProperStrand	9	chr15	79908931	79908956	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-9.3140
chr16	20675814	20675853	protein_coding	Eif4g1	exon	ENSMUSG00000045983	ProperStrand	199	chr7	116663633	116663694	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	5	-5.2561
chr4	10917627	10917680	protein_coding	Plekhf2	utr3	ENSMUSG00000049969	ProperStrand	12	chr18	35716808	35716881	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-8.5963
chr9	120037971	120038051	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	chr6	125071784	125071874	snoRNA	ENSMUSG00000088208_SCARNA11	.	ENSMUSG00000088208	ProperStrand	113	1	-3.5140
chr9	57253860	57253877	SINE	B1_Mm	Alu	chr9B1_Mm57253847	ProperStrand	39	chr16	23111749	23111815	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.6215
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr5	20279538	20279824	protein_coding	Phtf2	exon	ENSMUSG00000039987	ProperStrand	9	1	-10.2303
chr6	40123350	40123367	protein_coding	Gm5567	intron	ENSMUSG00000057716	ProperStrand	25	chr2	130101241	130101310	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-8.3452
chr1	162968445	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	chr10	23506297	23506347	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	6	-6.3078
chr4	116827016	116827281	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	chr6	38483979	38484004	tRNA	tRNA107-ArgCCT	.	1028169	ProperStrand	63	1	-10.2604
chr5	42136455	42136473	Low_complexity	GA-rich	Low_complexity	chr5GA-rich42136449	NonProperStrand	106	chr2	22444571	22444616	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-6.6460
chr2	26205950	26206040	protein_coding	Dnlz	exon	ENSMUSG00000075467	ProperStrand	6	chr5	108336363	108336443	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-15.4098
chr19	44031028	44031044	protein_coding	Cpn1	exon	ENSMUSG00000025196	NonProperStrand	3	chr11	62418013	62418084	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-11.8803
chr5	34084633	34084649	protein_coding	Letm1	utr3	ENSMUSG00000005299	NonProperStrand	145	chr9	15118322	15118362	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-3.5180
chr8	47648222	47648302	protein_coding	Mlf1ip	intron	ENSMUSG00000031629	ProperStrand	25	chr8	73419659	73419749	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.7786
chr5	108333816	108333908	protein_coding	Rpl5	exon	ENSMUSG00000058558	ProperStrand	235	chrX	34899453	34899470	protein_coding	Rhox4c	exon	ENSMUSG00000079635	NonProperStrand	2	1	-18.6989
chr9	78023109	78023150	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr11	6319664	6319764	protein_coding	Ppia	utr3	ENSMUSG00000071866	ProperStrand	127	1	-4.4262
chr3	149436517	149436538	LTR	LTR37A	ERV1	chr3LTR37A149436412	NonProperStrand	1	chr11	48613957	48614019	protein_coding	Gnb2l1	utr5	ENSMUSG00000020372	ProperStrand	347	1	-inf
chr9	113865163	113865846	protein_coding	Ubp1	exon	ENSMUSG00000009741	ProperStrand	29	chr16	23111373	23111463	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.3903
chr18	24042049	24042076	protein_coding	Mapre2	exon	ENSMUSG00000024277	ProperStrand	18	chr7	52381719	52381759	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-10.0072
chr2	147011593	147011610	protein_coding	Nkx2-2	exon	ENSMUSG00000027434	ProperStrand	47	chr1	89673634	89673724	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-3.7129
chr3	85942714	85942778	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	chr18	74938051	74938151	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	ProperStrand	1022	1	-4.1494
chr17	34089010	34089042	protein_coding	Rps18	exon	ENSMUSG00000008668	ProperStrand	111	chr2	127257594	127257728	protein_coding	Gpat2	exon	ENSMUSG00000046338	ProperStrand	19	6	-inf
chr5	135707578	135712170	protein_coding	Baz1b	exon	ENSMUSG00000002748	ProperStrand	83	chr13	21262113	21262158	tRNA	tRNA63-LeuAAG	.	1392050	ProperStrand	21	1	-14.7691
chr11	5092974	5093064	protein_coding	Kremen1	utr3	ENSMUSG00000020393	ProperStrand	33	chr5	108336410	108336490	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-6.0520
chrX	72214248	72214264	protein_coding-noncoding	Gab3	utr3	ENSMUSG00000032750	ProperStrand	420	chr10	80641499	80641574	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-2.4626
chr8	108233711	108233730	protein_coding	4933405L10Rik	exon	ENSMUSG00000013158	ProperStrand	94	chrX	149828130	149828146	protein_coding	Klf8	utr3	ENSMUSG00000041649	NonProperStrand	107	1	-11.2490
chr2	30088265	30088285	LTR	MURVY-int	ERV1	chr2MURVY-int30087557	ProperStrand	1	chr4	131908357	131908463	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	1	-inf
chr13	115098064	115107080	protein_coding	Ndufs4	exon	ENSMUSG00000021764	ProperStrand	7	chr16	23110470	23110516	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-6.6152
chr4	141738295	141738344	protein_coding	Kazn	intron	ENSMUSG00000040606	ProperStrand	123	chr4	63240338	63240355	protein_coding	6330416G13Rik	intron	ENSMUSG00000045917	NonProperStrand	23	1	-13.8121
chr3	113827103	113827119	protein_coding	Col11a1	utr3	ENSMUSG00000027966	NonProperStrand	139	chr8	12757419	12757437	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-6.9203
chr5	135856879	135856948	protein_coding	Pom121	exon	ENSMUSG00000053293	ProperStrand	127	chr18	35716696	35716761	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.0594
chr8	125430152	125430209	protein_coding-noncoding	Ankrd11	utr3	ENSMUSG00000035569	ProperStrand	5	chr17	25991600	25991700	protein_coding	Wdr90	exon	ENSMUSG00000073434	ProperStrand	91	1	-17.4757
chr1	63225596	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	chr11	55296195	55296329	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	2	-1.2580
chr8	108198883	108198913	protein_coding	Ctcf	exon	ENSMUSG00000005698	ProperStrand	75	chr2	26768399	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-5.1667
chrX	130987266	130987354	protein_coding	Drp2	utr3	ENSMUSG00000000223	ProperStrand	9	chr4	131865411	131865501	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-7.7817
chr17	6947138	6951648	protein_coding	Ezr	exon	ENSMUSG00000052397	ProperStrand	126	chr18	75161131	75161172	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	1	-7.5404
chr16	23111385	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	chr14	51683554	51683577	tRNA	tRNA188-LeuAAG	.	587860	ProperStrand	6	3	-13.4874
chr18	32978792	32978810	protein_coding	Tslp	utr3	ENSMUSG00000024379	ProperStrand	2	chr9	58488499	58488591	protein_coding	Nptn	exon	ENSMUSG00000032336	ProperStrand	25	1	-20.8701
chr17	32280466	32280518	protein_coding	Notch3	exon	ENSMUSG00000038146	ProperStrand	181	chr12	60141411	60141509	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	4	-14.6817
chr3	32451333	32451396	protein_coding	Mfn1	intron	ENSMUSG00000027668	ProperStrand	5	chr19	8799017	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-10.9603
chr11	48615536	48615603	snoRNA	ENSMUSG00000064725_Snord96a	.	ENSMUSG00000064725	ProperStrand	89	chr10	23505152	23505197	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-1.5439
chr9	30235085	30235102	protein_coding	Snx19	exon	ENSMUSG00000031993	ProperStrand	353	chr5	121655016	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	3	-2.9534
chr8	10592076	10592093	protein_coding	Myo16	intron	ENSMUSG00000039057	NonProperStrand	45	chr16	64926224	64926240	protein_coding	Htr1f	exon	ENSMUSG00000050783	NonProperStrand	10	1	-17.6220
chr4	55431651	55431668	lincRNA	Gm12505	exon	ENSMUSG00000087070	ProperStrand	447	chr4	43505764	43505931	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	2	-0.7549
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr15	76735465	76736308	protein_coding	Rpl8	exon	ENSMUSG00000003970	ProperStrand	191	1	-5.6856
chr17	31665018	31665079	protein_coding	Ndufv3	exon	ENSMUSG00000024038	ProperStrand	9	chr1	66521957	66521973	protein_coding	Unc80	intron	ENSMUSG00000055567	NonProperStrand	212	1	-14.6583
chrX	7475692	7475926	protein_coding	Pqbp1	utr5	ENSMUSG00000031157	ProperStrand	22	chr2	26768369	26768435	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	6	-19.7715
chr9	44432673	44448422	protein_coding	Ddx6	utr3	ENSMUSG00000032097	ProperStrand	59	chr7	116664868	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-6.7789
chr13	3917333	3917423	protein_coding	Net1	utr5	ENSMUSG00000021215	ProperStrand	32	chr9	64143795	64143875	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-9.0353
chr9	65127126	65127142	protein_coding	Cilp	exon	ENSMUSG00000042254	ProperStrand	212	chr1	182743613	182743677	protein_coding	H3f3a	utr5	ENSMUSG00000060743	ProperStrand	46	1	-11.3171
chr13	45504056	45504075	protein_coding	Mylip	exon	ENSMUSG00000038175	ProperStrand	39	chr16	23111386	23111413	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.9006
chr7	148634711	148634801	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	NonProperStrand	18	chr1	89673546	89673636	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	NonProperStrand	27	2	-19.7473
chr7	31365020	31370737	protein_coding	Wbp7	exon	ENSMUSG00000006307	ProperStrand	180	chr4	131908241	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-1.1639
chr7	125961626	125961644	protein_coding	9030624J02Rik	intron	ENSMUSG00000030982	NonProperStrand	5	chr3	108357255	108357351	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-9.6221
chr8	109937109	109937157	protein_coding	Nob1	intron	ENSMUSG00000003848	ProperStrand	28	chr18	35714196	35714290	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	3	-11.6500
chr11	102028476	102028500	protein_coding	Lsm12	exon	ENSMUSG00000020922	ProperStrand	28	chr16	23110942	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.2442
mmu-miR-5100	4	20	miRNA	mmu-miR-5100	.	mmu-miR-5100	ProperStrand	132	chr19	6316859	6317187	protein_coding	Cdc42bpg	exon	ENSMUSG00000024769	ProperStrand	90	2	-17.1176
chr11	62416575	62418186	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr16	23111372	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	10	-1.1427
chr17	79152411	79152493	protein_coding	Heatr5b	exon	ENSMUSG00000039414	ProperStrand	27	chr16	23110540	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.9061
chr17	43821781	43821797	protein_coding	Cyp39a1	intron	ENSMUSG00000023963	NonProperStrand	81	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-6.6386
chr15	36538301	36538329	protein_coding	Pabpc1	utr5	ENSMUSG00000022283	ProperStrand	908	chr11	22873594	22873680	protein_coding	Zrsr1	exon	ENSMUSG00000044068	ProperStrand	8	1	-12.0132
chr15	73066649	73072866	protein_coding	Ptk2	utr3	ENSMUSG00000022607	ProperStrand	31	chr19	8963037	8963173	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	8	-20.2889
chr6	83290968	83290999	protein_coding	Mob1a	utr3	ENSMUSG00000043131	ProperStrand	7	chr11	69483194	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-10.8973
chr5	17047214	17047294	LINE	L1Md_F2	L1	chr5L1Md_F217046427	ProperStrand	1	chr15	12277107	12277197	protein_coding	Golph3	intron	ENSMUSG00000022200	ProperStrand	35	1	-inf
chr9	14521224	14521241	protein_coding	Piwil4	intron	ENSMUSG00000036912	ProperStrand	24	chr16	23110826	23110873	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.3518
chr2	24903064	24903164	protein_coding	Pnpla7	utr3	ENSMUSG00000036833	ProperStrand	13	chr18	35102296	35102349	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-9.6841
chr11	116535949	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr11	59016051	59016098	protein_coding	Mrpl55	utr5	ENSMUSG00000036860	ProperStrand	2	1	-13.3417
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr13	94957641	94957657	protein_coding	Lhfpl2	intron	ENSMUSG00000045312	ProperStrand	37	1	-6.8616
chr2	181043530	181043547	protein_coding	Stmn3	exon	ENSMUSG00000027581	NonProperStrand	17	chr1	63225254	63225284	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	1	-11.3946
chr3	90346005	90346057	protein_coding	S100a16	exon	ENSMUSG00000074457	ProperStrand	7	chr18	35716764	35716854	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	7	-inf
chr12	83019896	83019973	protein_coding	Pcnx	exon	ENSMUSG00000021140	ProperStrand	32	chr13	30338190	30338207	protein_coding	Mboat1	utr3	ENSMUSG00000038732	NonProperStrand	148	1	-12.7708
chr5	123622050	123622066	protein_coding	Hpd	exon	ENSMUSG00000029445	ProperStrand	254	chr15	78724276	78724309	protein_coding	Gga1	utr3	ENSMUSG00000033128	ProperStrand	15	1	-13.2408
chr12	34122749	34122849	protein_coding	Twistnb	exon	ENSMUSG00000020561	ProperStrand	6	chr11	97642952	97643022	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-6.9580
chr2	90235298	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	38669015	38669031	protein_coding	Otop1	exon	ENSMUSG00000051596	NonProperStrand	8	1	-8.5166
chr8	82193854	82193940	protein_coding	Otud4	exon	ENSMUSG00000036990	ProperStrand	45	chr17	35299548	35299638	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-5.3357
chr10	74524554	74524633	protein_coding	Bcr	exon	ENSMUSG00000009681	ProperStrand	19	chr16	43886851	43886929	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	1	-10.4009
chr4	126877119	126877561	protein_coding	Dlgap3	exon	ENSMUSG00000042388	ProperStrand	12	chr3	123210854	123210882	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.0354
chr2	79843543	79843559	protein_coding	Pde1a	intron	ENSMUSG00000059173	NonProperStrand	275	chr1	162965981	162966044	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-1.1184
chr17	35273074	35281335	protein_coding	Bag6	exon	ENSMUSG00000024392	ProperStrand	181	chr4	131908691	131908867	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	11	-8.9866
chr14	33051793	33051809	protein_coding	Parg	exon	ENSMUSG00000021911	NonProperStrand	2	chr6	131330290	131330412	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	ProperStrand	408	1	-16.8939
chr7	121652415	121661873	protein_coding	Pde3b	exon	ENSMUSG00000030671	ProperStrand	16	chr5	74489597	74489676	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	13	-inf
chr3	104267844	104267912	protein_coding	Lrig2	exon	ENSMUSG00000032913	ProperStrand	10	chr7	116664797	116664887	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-5.9693
chr15	72927434	72927510	protein_coding	Chrac1	intron	ENSMUSG00000068391	NonProperStrand	26	chr1	162965537	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	21	-19.6591
chr7	129132363	129132388	protein_coding	Gga2	utr3	ENSMUSG00000030872	ProperStrand	65	chr1	39605590	39605696	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-7.1845
chr2	26494834	26494858	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr4	53873576	53873639	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	1	-2.2328
chr2	181450622	181451208	protein_coding	Oprl1	exon	ENSMUSG00000027584	ProperStrand	32	chr4	131908236	131908344	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-8.9210
chr11	105193293	105193309	protein_coding	Mrc2	exon	ENSMUSG00000020695	ProperStrand	12	chr4	131865917	131865980	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.6729
chr6	25638699	25638715	protein_coding	Gpr37	exon	ENSMUSG00000039904	ProperStrand	49	chr4	131865855	131865922	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-3.7721
chr9	20583482	20584403	protein_coding	Col5a3	exon	ENSMUSG00000004098	ProperStrand	47	chr19	8963096	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.6924
chr16	87425939	87425957	protein_coding	Ltn1	exon	ENSMUSG00000052299	ProperStrand	49	chr17	66153251	66153284	protein_coding	Ppp4r1	exon	ENSMUSG00000061950	ProperStrand	46	1	-14.2647
chr17	45769879	45770002	protein_coding	Capn11	exon	ENSMUSG00000058626	ProperStrand	19	chr2	26493372	26493472	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-5.9729
chr2	76471660	76471676	protein_coding	Prkra	exon	ENSMUSG00000002731	NonProperStrand	65	chr3	101396354	101396370	protein_coding	Atp1a1	exon	ENSMUSG00000033161	ProperStrand	316	1	-9.8233
chr2	26203131	26203147	protein_coding	Gpsm1	utr3	ENSMUSG00000026930	ProperStrand	93	chr4	131399490	131399506	protein_coding	Mecr	exon	ENSMUSG00000028910	NonProperStrand	109	1	-11.2332
chr8	125005402	125005425	protein_coding	Ctu2	exon	ENSMUSG00000049482	ProperStrand	21	chr11	69481335	69481409	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	3	-12.3276
chr11	76027227	76027314	protein_coding	Glod4	utr3	ENSMUSG00000017286	ProperStrand	23	chr1	88024733	88024752	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	3	-19.4842
chr17	92826829	92826850	LINE	Lx3A	L1	chr17Lx3A92826732	ProperStrand	4	chr8	73419657	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	4	-inf
chr16	23110963	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	chr13	23609072	23609146	tRNA	tRNA110-GlyGCC	.	2969	ProperStrand	12	4	-9.5315
chr14	58426180	58426260	protein_coding	F630043A04Rik	utr3	ENSMUSG00000021965	ProperStrand	24	chr11	120422342	120422432	protein_coding	P4hb	utr3	ENSMUSG00000025130	ProperStrand	83	1	-14.5138
chr2	25312429	25313191	protein_coding	Clic3	exon	ENSMUSG00000015093	ProperStrand	79	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-5.3298
chr19	8798484	8798510	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	chr4	86232354	86232414	snoRNA	ENSMUSG00000088958_Scarna8	.	ENSMUSG00000088958	ProperStrand	366	1	-1.9396
chrX	40012079	40012099	protein_coding	Odz1	intron	ENSMUSG00000016150	ProperStrand	5	chr7	29136563	29136641	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-7.2327
chr1	178754159	178754175	protein_coding	Sdccag8	intron	ENSMUSG00000026504	ProperStrand	54	chr3	94166413	94166430	protein_coding	C2cd4d	utr5	ENSMUSG00000091648	NonProperStrand	5	1	-18.5689
chr7	138573460	138573476	protein_coding	Fgfr2	intron	ENSMUSG00000030849	ProperStrand	100	chr18	35716822	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.3821
chr17	39979984	39980008	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr5	30595871	30595973	protein_coding	Ept1	utr3	ENSMUSG00000075703	ProperStrand	18	6	-19.8138
chr7	108599969	108610037	protein_coding	Pde2a	exon	ENSMUSG00000030653	ProperStrand	7	chr4	116827119	116827184	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-11.4491
chr11	50112674	50112715	protein_coding	Canx	exon	ENSMUSG00000020368	ProperStrand	296	chr8	73419529	73419607	protein_coding	Rpl18a	exon	ENSMUSG00000045128	ProperStrand	394	1	-6.3699
chr2	180748144	180748586	protein_coding	Col20a1	exon	ENSMUSG00000016356	ProperStrand	17	chr4	154959539	154960868	protein_coding	Nadk	exon	ENSMUSG00000029063	ProperStrand	25	1	-17.5812
chr1	135550692	135550714	protein_coding	Zc3h11a	intron	ENSMUSG00000026464	ProperStrand	102	chr4	56910498	56910588	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-5.0705
chr17	35384116	35384195	snoRNA	ENSMUSG00000065273_SNORD83	.	ENSMUSG00000065273	ProperStrand	244	chr16	23110828	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	10	-0.8687
chr7	112895514	112895530	protein_coding	Tpp1	exon	ENSMUSG00000030894	NonProperStrand	25	chr5	121655099	121655129	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.4318
chr9	90478985	90479007	LTR	ERVL-B4-int	ERVL	chr9ERVL-B4-int90478852	ProperStrand	4	chr3	123210854	123210894	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	4	-inf
chr10	58276343	58276443	protein_coding	Sh3rf3	utr5	ENSMUSG00000037990	ProperStrand	18	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-3.3354
chr17	34089003	34089492	protein_coding	Rps18	exon	ENSMUSG00000008668	ProperStrand	111	chr4	131865855	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-4.3637
chr11	32500864	32503675	protein_coding	Stk10	exon	ENSMUSG00000020272	NonProperStrand	73	chr4	140121137	140121153	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	1	-11.2762
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr9	110747084	110747101	protein_coding	Prss46	utr5	ENSMUSG00000049719	NonProperStrand	2	1	-18.0510
chr4	48671757	48674915	protein_coding	Tmeff1	exon	ENSMUSG00000028347	NonProperStrand	3	chr17	30162508	30162530	protein_coding	Zfand3	intron	ENSMUSG00000044477	NonProperStrand	7	1	-inf
chr5	128374017	128374033	protein_coding	Tmem132d	intron	ENSMUSG00000034310	NonProperStrand	22	chr8	73419657	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-8.3362
chr18	57400307	57400324	protein_coding	Megf10	exon	ENSMUSG00000024593	ProperStrand	143	chr11	62416577	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-3.5209
chr19	42342921	42342937	protein_coding	Golga7b	exon	ENSMUSG00000042532	ProperStrand	8	chr16	23111383	23111418	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.8232
chr4	116827121	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	chr8	13876111	13876226	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	6	-9.7914
chr9	118944002	118944019	protein_coding	Ctdspl	intron	ENSMUSG00000047409	NonProperStrand	9	chr4	138997109	138997173	protein_coding	Ubr4	exon	ENSMUSG00000066036	ProperStrand	304	1	-13.9474
chr2	90701586	90703816	protein_coding	Mtch2	exon	ENSMUSG00000027282	ProperStrand	12	chr17	24857738	24857818	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-5.3067
chr11	60003281	60003381	protein_coding	Rai1	exon	ENSMUSG00000062115	ProperStrand	25	chr2	26494763	26494797	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.7537
chr1	167797761	167797778	protein_coding	Cd247	intron	ENSMUSG00000005763	ProperStrand	10	chr17	24856620	24856753	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-10.0669
chr8	32261154	32261171	protein_coding	Tti2	utr5	ENSMUSG00000031577	NonProperStrand	2	chr18	75161533	75161565	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-14.6571
chr11	52202209	52202289	protein_coding	Vdac1	utr3	ENSMUSG00000020402	ProperStrand	107	chr18	35716740	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.2874
chr2	129998643	129998713	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr5	130295431	130295521	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-0.8588
chr4	155263508	155263598	protein_coding	Pusl1	intron	ENSMUSG00000051557	ProperStrand	4	chr7	29136525	29136548	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-7.7378
chr4	140121138	140121154	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	chr2	130102054	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-3.7948
chr13	104647548	104647565	protein_coding	Erbb2ip	exon	ENSMUSG00000021709	NonProperStrand	8	chr2	26494782	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-7.0621
chr7	13614811	13614906	protein_coding	Trim28	exon	ENSMUSG00000005566	ProperStrand	296	chr6	24684480	24684497	protein_coding	Hyal6	exon	ENSMUSG00000029679	NonProperStrand	114	1	-8.8284
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr5	74489545	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	7	-8.0352
chr7	29136635	29136654	protein_coding	Rps16	intron	ENSMUSG00000037563	ProperStrand	191	chr15	81871941	81872013	protein_coding	Nhp2l1	utr3	ENSMUSG00000063480	ProperStrand	40	2	-18.2063
chr15	99609753	99610762	protein_coding	Lima1	utr3	ENSMUSG00000023022	ProperStrand	159	chr11	97642952	97643056	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-1.9836
chr16	11144176	11144276	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr7	129658371	129658393	protein_coding	Prkcb	intron	ENSMUSG00000052889	NonProperStrand	16	1	-13.1474
chr3	82816757	82816774	protein_coding	Fgg	exon	ENSMUSG00000033860	NonProperStrand	321	chrX	71517858	71517958	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	2	-5.6878
chr13	36818660	36818679	protein_coding	Nrn1	exon	ENSMUSG00000039114	ProperStrand	15	chr4	131908365	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.7937
chr11	116535464	116535516	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr16	84977574	84977590	protein_coding	App	intron	ENSMUSG00000022892	NonProperStrand	101	1	-4.8966
chr8	74008400	74008417	protein_coding	Ano8	exon	ENSMUSG00000034863	NonProperStrand	171	chr9	120039533	120039678	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-2.9092
chr12	4206393	4206470	protein_coding	Adcy3	exon	ENSMUSG00000020654	ProperStrand	33	chr18	36885433	36885449	protein_coding	Cd14	exon	ENSMUSG00000051439	ProperStrand	65	1	-14.3597
chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	chr12	17552965	17553087	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-2.7283
chr4	21801667	21801763	protein_coding	Sfrs18	exon	ENSMUSG00000028248	ProperStrand	36	chr4	133163265	133163303	protein_coding	Zdhhc18	utr3	ENSMUSG00000037553	ProperStrand	51	1	-14.6861
chr16	33708141	33708173	protein_coding	Heg1	intron	ENSMUSG00000075254	ProperStrand	19	chr10	39978294	39978384	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-7.7531
chr2	130979139	130979156	protein_coding	1700037H04Rik	intron	ENSMUSG00000027327	NonProperStrand	26	chr19	8963021	8963083	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.7706
chr2	23020086	23023848	protein_coding	Yme1l1	exon	ENSMUSG00000026775	NonProperStrand	2	chr19	9079624	9079699	protein_coding	Ahnak	exon	ENSMUSG00000069833	NonProperStrand	12	2	-inf
chr1	102076754	102076792	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	chr15	5068425	5068479	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	2	-4.3164
chr10	43252511	43252611	protein_coding	1700021F05Rik	exon	ENSMUSG00000019797	ProperStrand	7	chr17	13112564	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-8.9252
chr5	108357356	108357372	protein_coding	Fam69a	intron	ENSMUSG00000029270	NonProperStrand	1	chr7	29136582	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-inf
chr4	155189383	155189445	protein_coding	Ccnl2	exon	ENSMUSG00000029068	ProperStrand	19	chr11	69481333	69481470	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-8.9020
chr9	70350897	70351001	protein_coding	Rnf111	intron	ENSMUSG00000032217	ProperStrand	33	chr16	23110986	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.9284
chr6	49202958	49203005	protein_coding	Tra2a	intron	ENSMUSG00000029817	ProperStrand	54	chr17	13112510	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	2	-7.9200
chr6	70098720	70098737	LTR	MTEa	MaLR	chr6MTEa70098663	ProperStrand	30	chr5	121655030	121655062	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.0733
chr1	71699417	71699453	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr8	74446729	74446745	protein_coding	Zfp617	intron	ENSMUSG00000066880	NonProperStrand	208	1	-5.3816
chr18	24363855	24363872	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr10	110918593	110918693	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	3	-5.0310
chr2	26493391	26493515	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr1	152296869	152296885	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	1	-2.1202
chr10	61329160	61330213	protein_coding	Col13a1	exon	ENSMUSG00000058806	ProperStrand	120	chr7	148634800	148634834	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-2.7264
chr2	27384443	27384491	protein_coding	Wdr5	intron	ENSMUSG00000026917	ProperStrand	81	chr5	122222759	122222775	protein_coding	Atxn2	utr5	ENSMUSG00000042605	ProperStrand	83	1	-12.0577
chr5	74489202	74489263	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr9	107810701	107813856	protein_coding	Mst1r	exon	ENSMUSG00000032584	NonProperStrand	30	1	-6.9960
chr2	6113662	6113681	protein_coding	Echdc3	intron	ENSMUSG00000039063	ProperStrand	4	chr4	131908833	131908897	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-6.2660
chr13	96102685	96102711	protein_coding	Zbed3	intron	ENSMUSG00000041995	ProperStrand	33	chr16	23110859	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.9284
chr7	57041565	57041581	protein_coding	Prmt3	exon	ENSMUSG00000030505	ProperStrand	89	chr2	38859675	38860262	protein_coding	Rpl35	exon	ENSMUSG00000062997	ProperStrand	68	1	-12.2688
chr4	131563052	131563071	protein_coding	Epb4.1	exon	ENSMUSG00000028906	ProperStrand	23	chrX	93136011	93136027	protein_coding	Las1l	exon	ENSMUSG00000057421	ProperStrand	248	1	-12.4093
chr4	118793162	118793248	protein_coding	Slc2a1	intron	ENSMUSG00000028645	ProperStrand	361	chr11	5204571	5204591	protein_coding	Znrf3	intron	ENSMUSG00000041961	ProperStrand	63	3	-19.8755
chr4	57958043	57963732	protein_coding	Txn1	exon	ENSMUSG00000028367	ProperStrand	31	chr2	26494772	26494829	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.3375
chr11	43383312	43383328	protein_coding	Ccnjl	intron	ENSMUSG00000044707	NonProperStrand	4	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-14.6473
chr17	30730178	30730222	protein_coding	Glo1	utr3	ENSMUSG00000024026	ProperStrand	75	chr14	33005041	33005089	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	3	-8.8651
chr14	64119064	64119109	protein_coding	Tdh	exon	ENSMUSG00000021953	ProperStrand	67	chr4	131865474	131865516	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-3.7955
chr3	4306070	4306150	LTR	MTA_Mm-int	MaLR	chr3MTA_Mm-int4305361	ProperStrand	1	chr6	74142612	74142702	LTR	MTA_Mm-int	MaLR	chr6MTA_Mm-int74142175	ProperStrand	1	1	-inf
chr19	46112555	46112574	protein_coding	Ldb1	intron	ENSMUSG00000025223	ProperStrand	42	chr5	151755616	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-8.4542
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr1	63225577	63225656	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-1.0804
chr2	32502426	32502504	protein_coding	Eng	utr5	ENSMUSG00000026814	ProperStrand	29	chr19	8963029	8963053	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-6.0882
chr7	91031354	91031396	protein_coding	Mesdc1	exon	ENSMUSG00000070462	ProperStrand	19	chr18	75161144	75161172	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	1	-11.3513
chr2	32184937	32184954	protein_coding	Dnm1	intron	ENSMUSG00000026825	NonProperStrand	8	chr18	35716681	35716761	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-5.9895
chr4	105706456	105706546	LINE	L1_Mur2	L1	chr4L1_Mur2105706356	NonProperStrand	1	chr9	103894045	103894125	LINE	L1Md_F2	L1	chr9L1Md_F2103889030	NonProperStrand	1	1	-inf
chr2	162898455	162909246	protein_coding	Mybl2	exon	ENSMUSG00000017861	ProperStrand	230	chr7	116663634	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	7	-7.5303
chr2	90235286	90235348	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr13	76341035	76341055	protein_coding	Fam81b	intron	ENSMUSG00000078966	NonProperStrand	220	2	-3.8131
chr8	125733013	125733105	protein_coding-noncoding	Chmp1a	utr3	ENSMUSG00000000743	ProperStrand	1	chr15	79908934	79909014	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-inf
chr1	116322332	116322412	LTR	MTC	MaLR	chr1MTC116322306	ProperStrand	1	chr1	116322175	116322265	LTR	MTE2b	MaLR	chr1MTE2b116322163	NonProperStrand	1	1	-inf
chr8	34693168	34693184	protein_coding	Tex15	exon	ENSMUSG00000009628	NonProperStrand	31	chr1	120355738	120355760	snRNA	ENSMUSG00000080542_U4atac	.	ENSMUSG00000080542	ProperStrand	73	1	-14.2459
chr2	26493410	26493510	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr11	11837021	11837834	protein_coding	Grb10	exon	ENSMUSG00000020176	ProperStrand	11	1	-9.6303
chr7	87535444	87535524	protein_coding	Furin	utr3	ENSMUSG00000030530	ProperStrand	22	chr10	23505187	23505277	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.8416
chr7	30231537	30231594	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	chr2	119795055	119795071	protein_coding	Mga	utr3	ENSMUSG00000033943	ProperStrand	180	1	-6.6611
chr5	117092038	117092054	LTR	ORR1B1	MaLR	chr5ORR1B1117091781	NonProperStrand	12	chr10	12341172	12353751	protein_coding	Utrn	exon	ENSMUSG00000019820	ProperStrand	69	1	-16.3146
chr12	57368398	57368417	DNA	MER5A	MER1_type	chr12MER5A57368332	NonProperStrand	5	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-14.1387
chr16	11240926	11253799	protein_coding	Gspt1	exon	ENSMUSG00000062203	ProperStrand	49	chr4	131908688	131908770	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.5109
chr7	50690726	50690742	protein_coding	Lim2	exon	ENSMUSG00000004613	NonProperStrand	50	chr7	52382014	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-7.0744
chr16	20681035	20686946	protein_coding	Eif4g1	exon	ENSMUSG00000045983	ProperStrand	199	chr19	8799585	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	4	-14.0437
chr11	45723144	45723160	protein_coding	Clint1	utr3	ENSMUSG00000006169	NonProperStrand	273	chr14	33005038	33005093	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	2	-2.6663
mmu-miR-6240	2	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr8	46406045	46406061	protein_coding	Cyp4v3	exon	ENSMUSG00000079057	ProperStrand	13	1	-8.9859
chr17	31459183	31465128	protein_coding	Slc37a1	exon	ENSMUSG00000024036	ProperStrand	17	chr8	73419657	73419729	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-5.5405
chr2	31185095	31185195	protein_coding	Hmcn2	intron	ENSMUSG00000055632	NonProperStrand	11	chr16	23110527	23110581	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.6740
chr2	77600388	77600405	protein_coding	Zfp385b	intron	ENSMUSG00000027016	NonProperStrand	17	chr4	131908689	131908808	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.3002
chr8	86205081	86205112	protein_coding	Pkn1	exon	ENSMUSG00000057672	ProperStrand	36	chr1	162966214	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	3	-20.2663
chr1	72272859	72272949	snRNA	ENSMUSG00000075752_U2	.	ENSMUSG00000075752	ProperStrand	535	chr1	162966813	162966843	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-2.1951
chr14	57749791	57752028	protein_coding	Gjb6	utr5	ENSMUSG00000040055	ProperStrand	4	chr3	123210878	123210906	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-7.3786
chr19	53970136	53970153	protein_coding	Pdcd4	intron	ENSMUSG00000024975	NonProperStrand	2	chr1	162966204	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-15.0517
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr11	6428032	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	14	-1.0545
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr11	51412978	51413079	protein_coding	Agxt2l2	exon	ENSMUSG00000020359	ProperStrand	4	2	-20.4331
chr19	25484358	25484374	protein_coding	Kank1	exon	ENSMUSG00000032702	ProperStrand	218	chr11	62416575	62416617	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-2.7656
chr1	89091564	89092064	protein_coding	Chrnd	exon	ENSMUSG00000026251	ProperStrand	32	chr9	120039545	120039591	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-4.4995
mmu-miR-6240	5	23	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr5	30976736	30976837	protein_coding	Cenpa	utr3	ENSMUSG00000029177	ProperStrand	18	1	-8.3164
chr14	57676692	57676708	protein_coding	Gja3	utr5	ENSMUSG00000048582	ProperStrand	34	chr16	38158166	38158226	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	2	-15.4665
chr11	80965641	80965658	protein_coding	Accn1	exon	ENSMUSG00000020704	NonProperStrand	228	chr11	85345319	85345403	protein_coding	Bcas3	exon	ENSMUSG00000059439	ProperStrand	20	1	-12.8657
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	1	-3.5212
chr9	58703523	58703540	protein_coding	Hcn4	exon	ENSMUSG00000032338	NonProperStrand	19	chr10	80642373	80642490	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-8.4047
chr9	115126015	115126045	protein_coding	Osbpl10	exon	ENSMUSG00000040875	ProperStrand	6	chr1	162965532	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-7.8657
chr2	21136127	21136143	protein_coding	Thnsl1	utr3	ENSMUSG00000048550	ProperStrand	10	chr11	69481333	69481473	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-6.6979
chr16	91729702	91729722	protein_coding	Itsn1	utr5	ENSMUSG00000022957	ProperStrand	172	chr7	29136525	29136600	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-0.8339
chr11	20991333	20991349	protein_coding	Peli1	utr5	ENSMUSG00000020134	ProperStrand	69	chr2	130101241	130101310	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-6.3147
chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	chr3	88497864	88497909	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-4.3065
chr5	30473910	30473941	protein_coding	Hadha	exon	ENSMUSG00000025745	ProperStrand	35	chr6	119875051	119875101	protein_coding	Wnk1	utr3	ENSMUSG00000045962	ProperStrand	221	2	-18.6164
chr11	51416173	51417907	protein_coding	Hnrnpab	exon	ENSMUSG00000020358	ProperStrand	124	chr9	15119650	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.4649
chr7	149170854	149171340	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	chr4	116828379	116828451	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	2	-10.2552
chr3	123039527	123045973	protein_coding	Sec24d	exon	ENSMUSG00000039234	ProperStrand	22	chr11	6428089	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.0956
chr2	181322945	181322995	protein_coding	Znf512b	exon	ENSMUSG00000000823	ProperStrand	17	chr2	30041895	30041995	protein_coding	Ccbl1	exon	ENSMUSG00000039648	ProperStrand	10	9	-20.7094
chr14	76926611	76926627	LINE	L1MB3	L1	chr14L1MB376926376	ProperStrand	61	chr11	79846123	79846169	protein_coding	Suz12	utr3	ENSMUSG00000017548	ProperStrand	53	1	-13.5303
chrX	98748061	98748077	protein_coding	Taf1	exon	ENSMUSG00000031314	ProperStrand	61	chr6	125136488	125136551	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	1	-6.4090
chr2	158451026	158451043	protein_coding	Actr5	exon	ENSMUSG00000037761	NonProperStrand	94	chr12	112779148	112779238	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	5	-16.0812
chr10	121471489	121471507	protein_coding	Srgap1	intron	ENSMUSG00000020121	ProperStrand	33	chr5	151755616	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-8.9402
chr5	22043417	22043445	protein_coding	Orc5	intron	ENSMUSG00000029012	ProperStrand	4	chr14	52829460	52829484	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-13.8711
chr3	45780645	45780665	LINE	Lx2B	L1	chr3Lx2B45780445	ProperStrand	34	chr9	61761207	61761267	protein_coding	Rplp1	exon	ENSMUSG00000007892	ProperStrand	116	1	-13.1338
chr8	27039696	27056762	protein_coding	Hgsnat	exon	ENSMUSG00000037260	ProperStrand	41	chr1	162965534	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.9824
chr2	90235291	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	118221596	118224472	protein_coding	Eif4g2	exon	ENSMUSG00000005610	ProperStrand	134	2	-5.1400
chr3	33967961	33967977	protein_coding	Fxr1	utr3	ENSMUSG00000027680	ProperStrand	58	chr12	110892886	110892905	snoRNA	ENSMUSG00000064621_AF357355	.	ENSMUSG00000064621	ProperStrand	60	1	-13.3850
chr5	89383967	89457318	protein_coding	Slc4a4	exon	ENSMUSG00000060961	NonProperStrand	195	chr2	22444702	22444769	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-5.4514
chr19	10689997	10690058	protein_coding	Ddb1	exon	ENSMUSG00000024740	ProperStrand	304	chr19	8963032	8963048	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-6.9207
chr7	152118581	152118597	protein_coding	Ccnd1	exon	ENSMUSG00000070348	ProperStrand	93	chr16	23111447	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.7189
chr17	4082321	4082411	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr5	108336399	108336479	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-1.8855
chr14	51427279	51427359	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr4	116875159	116875249	snRNA	ENSMUSG00000070228_U5	.	ENSMUSG00000070228	ProperStrand	131	1	-5.6692
chr8	72287172	72287188	protein_coding	Zfp866	utr3	ENSMUSG00000043090	NonProperStrand	134	chr19	8799833	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-3.4317
chr4	123027129	123027210	protein_coding	Macf1	utr3	ENSMUSG00000028649	ProperStrand	320	chr10	39978312	39978363	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	2	-4.1868
chr18	10052131	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr18	59490475	59490492	protein_coding	Chsy3	intron	ENSMUSG00000058152	ProperStrand	35	1	-9.8862
chr2	34628136	34631845	protein_coding	Hspa5	utr3	ENSMUSG00000026864	ProperStrand	181	chr16	23110843	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	12	-3.2985
chr11	97642951	97643091	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	chr7	52381973	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	15	-1.3662
chr11	102294588	102294613	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr7	117189957	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	3	-1.2562
chr2	26451868	26451884	protein_coding	Gm20532	intron	ENSMUSG00000092356	ProperStrand	46	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.7662
chr17	29230601	29230620	protein_coding	Cdkn1a	intron	ENSMUSG00000023067	NonProperStrand	11	chr7	116664811	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	5	-inf
chr7	52085920	52085994	protein_coding	Nup62	utr3	ENSMUSG00000043858	ProperStrand	47	chr10	23505152	23505196	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-8.5829
chr11	95828069	95828890	protein_coding	Igf2bp1	exon	ENSMUSG00000013415	ProperStrand	140	chr16	17367558	17367642	protein_coding	Pi4ka	exon	ENSMUSG00000041720	ProperStrand	39	1	-12.4812
chr17	35189991	35190081	protein_coding	Clic1	exon	ENSMUSG00000007041	ProperStrand	12	chr5	120992597	120992677	protein_coding	Tpcn1	intron	ENSMUSG00000032741	ProperStrand	15	1	-19.3113
chr2	25785057	25795101	protein_coding	Camsap1	utr3	ENSMUSG00000026933	ProperStrand	27	chr4	131908726	131908901	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-6.6261
chr3	79223176	79223193	protein_coding	Gm17359	intron	ENSMUSG00000091685	NonProperStrand	50	chr2	21005618	21005635	pseudogene	Gm13377	.	ENSMUSG00000086821	ProperStrand	15	1	-16.5093
chr5	30092869	30092888	protein_coding	Dnajb6	exon	ENSMUSG00000029131	ProperStrand	81	chr2	158182155	158182199	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-4.4259
chr15	75454065	75454165	protein_coding	Zfp41	utr3	ENSMUSG00000047003	ProperStrand	9	chr8	73419657	73419729	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-6.8403
chr17	45707726	45708043	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr14	118353023	118353040	protein_coding	Gpc6	intron	ENSMUSG00000058571	NonProperStrand	31	1	-8.0506
chr14	56406769	56406785	protein_coding	Ripk3	exon	ENSMUSG00000022221	NonProperStrand	12	chr4	134480208	134480227	protein_coding	D4Wsu53e	exon	ENSMUSG00000037266	NonProperStrand	50	1	-16.8825
chr19	10934674	10934690	protein_coding	Tmem132a	exon	ENSMUSG00000024736	NonProperStrand	2	chr15	78982035	78982051	protein_coding	Polr2f	exon	ENSMUSG00000033020	NonProperStrand	71	1	-inf
chr3	88603787	88603873	pseudogene	5830417I10Rik	.	ENSMUSG00000078684	ProperStrand	68	chr1	162965531	162965554	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-7.7703
chr19	44374274	44375771	protein_coding	Scd2	exon	ENSMUSG00000025203	ProperStrand	219	chr9	78328415	78328433	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-3.8395
chr3	101239388	101239404	protein_coding	Igsf3	exon	ENSMUSG00000042035	NonProperStrand	4	chr11	74718931	74718968	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	1	-14.7059
chr11	3649569	3649587	protein_coding	Osbp2	intron	ENSMUSG00000020435	ProperStrand	60	chr2	26493367	26493483	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-3.7425
chr2	90235285	90235347	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	13	-9.6199
chr10	53673224	53673241	protein_coding	Man1a	intron	ENSMUSG00000003746	ProperStrand	16	chr7	31371851	31371947	protein_coding	Wbp7	exon	ENSMUSG00000006307	ProperStrand	180	1	-13.7964
chr17	34020524	34020624	protein_coding	Kifc1	exon	ENSMUSG00000079553	ProperStrand	47	chr12	17552972	17553030	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-5.5657
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr11	69911325	69911342	protein_coding	Asgr2	exon	ENSMUSG00000040963	NonProperStrand	8	1	-11.9238
chr14	71065339	71065355	protein_coding	Xpo7	utr3	ENSMUSG00000022100	ProperStrand	109	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-7.7340
chr10	60805893	60806392	protein_coding	X99384	exon	ENSMUSG00000020092	ProperStrand	60	chr5	74489621	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-3.7780
chr8	54059979	54060069	LTR	MTA_Mm-int	MaLR	chr8MTA_Mm-int54059967	ProperStrand	1	chr8	54059692	54059782	LTR	MTA_Mm	MaLR	chr8MTA_Mm54059574	ProperStrand	1	1	-inf
chr9	95525014	95525035	antisense	Gm16126	.	ENSMUSG00000086585	NonProperStrand	229	chr2	179774177	179777044	protein_coding	Psma7	exon	ENSMUSG00000027566	ProperStrand	45	1	-11.2074
chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	chr17	66693668	66695716	protein_coding	1110012J17Rik	exon	ENSMUSG00000052105	ProperStrand	60	2	-13.9160
chr15	31531409	31531426	protein_coding	Cct5	exon	ENSMUSG00000022234	ProperStrand	116	chr7	30231473	30231592	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	1	-7.5307
chr3	97475797	97475860	protein_coding	Prkab2	utr3	ENSMUSG00000038205	ProperStrand	7	chr7	148634804	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-13.4551
chr4	111926700	111928231	protein_coding	Skint3	exon	ENSMUSG00000070868	ProperStrand	13	chr11	6428087	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-10.0847
chr4	56775748	56781886	protein_coding	Ikbkap	exon	ENSMUSG00000028431	ProperStrand	44	chr16	23110454	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.0046
chr3	96527940	96527956	protein_coding	Polr3c	exon	ENSMUSG00000028099	NonProperStrand	75	chr10	75398897	75398916	protein_coding	Chchd10	intron	ENSMUSG00000049422	ProperStrand	140	1	-11.1636
chr6	134780323	134780339	protein_coding	Crebl2	utr5	ENSMUSG00000032652	ProperStrand	41	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-12.4545
chr5	144272355	144272419	protein_coding	Rac1	intron	ENSMUSG00000001847	ProperStrand	32	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-4.7971
chr12	17552939	17552995	protein_coding	Odc1	intron	ENSMUSG00000011179	ProperStrand	173	chr17	26928994	26929035	protein_coding	Bnip1	exon	ENSMUSG00000024191	ProperStrand	4	1	-16.9091
chr1	24619277	24619377	protein_coding	Gm10222	exon	ENSMUSG00000067736	ProperStrand	42	chr16	23111451	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-3.2870
chr18	75161533	75161585	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	chr1	9932605	9932623	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	2	-3.5880
chr3	142351261	142351279	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr2	75503173	75503332	protein_coding	Hnrnpa3	exon	ENSMUSG00000059005	ProperStrand	289	1	-4.7114
chrX	91781363	91781453	protein_coding	Maged1	exon	ENSMUSG00000025151	ProperStrand	43	chr11	69481364	69481444	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.8146
chr5	122940046	122940066	protein_coding	Atp2a2	intron	ENSMUSG00000029467	NonProperStrand	9	chr11	62418014	62418057	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-9.4009
chr5	100072044	100072061	protein_coding	A930011G23Rik	intron	ENSMUSG00000089809	NonProperStrand	43	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.3073
chr13	64295262	64295335	protein_coding	Cdc14b	utr3	ENSMUSG00000033102	NonProperStrand	9	chr11	57943600	57943636	protein_coding	Gemin5	exon	ENSMUSG00000037275	ProperStrand	33	2	-18.8929
chr3	136526736	136526753	protein_coding	Ppp3ca	intron	ENSMUSG00000028161	NonProperStrand	120	chr7	29136525	29136575	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.2914
chr1	130181861	130181879	protein_coding	Lct	exon	ENSMUSG00000026354	NonProperStrand	9	chr9	65642999	65643066	protein_coding	Zfp609	utr5	ENSMUSG00000040524	ProperStrand	87	1	-16.4041
chr8	77554610	77554643	protein_coding	Hmgxb4	utr3	ENSMUSG00000034518	ProperStrand	25	chr16	23110926	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.2939
chr7	54442922	54443012	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	chr8	19948408	19948498	pseudogene	2610005L07Rik	.	ENSMUSG00000071793	ProperStrand	40	1	-12.4164
chr3	104764495	104764511	protein_coding	Wnt2b	utr5	ENSMUSG00000027840	NonProperStrand	50	chr8	73419657	73419712	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.4624
chr2	129004103	129004121	antisense	AI847159	.	ENSMUSG00000084826	NonProperStrand	63	chr16	23110454	23110520	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.3788
chr9	64333076	64333098	protein_coding	Megf11	intron	ENSMUSG00000036466	NonProperStrand	64	chr16	23110453	23110489	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.3523
chr4	151514945	151514961	protein_coding	Espn	intron	ENSMUSG00000028943	ProperStrand	18	chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-8.8757
chr6	88843445	88847318	protein_coding	Mcm2	exon	ENSMUSG00000002870	ProperStrand	83	chr1	71675935	71675958	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	1	-7.1868
chr9	67810942	67811901	protein_coding	Vps13c	exon	ENSMUSG00000035284	ProperStrand	69	chr1	89673579	89673659	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-3.0116
chr18	46665959	46666005	protein_coding	Fem1c	exon	ENSMUSG00000033319	ProperStrand	11	chr18	35716762	35716875	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	5	-20.2322
chr1	184378751	184378768	protein_coding	Trp53bp2	exon	ENSMUSG00000026510	ProperStrand	19	chr4	131865867	131865983	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.7782
chr10	126532147	126532163	protein_coding	Os9	utr3	ENSMUSG00000040462	NonProperStrand	28	chr10	23505152	23505206	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.4185
chr1	166369431	166369459	protein_coding	Atp1b1	exon	ENSMUSG00000026576	ProperStrand	67	chr7	127987285	128001859	protein_coding	Eef2k	utr5	ENSMUSG00000035064	NonProperStrand	31	1	-14.4190
chr10	122002975	122003065	LINE	L1Md_F2	L1	chr10L1Md_F2122002095	NonProperStrand	23	chr4	74389315	74389405	LINE	L1_Mus4	L1	chr4L1_Mus474388662	NonProperStrand	1	1	-inf
chr2	120002540	120002556	protein_coding	Pla2g4e	exon	ENSMUSG00000050211	ProperStrand	3	chr19	8963030	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-8.3179
chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	chr2	131005064	131005125	protein_coding	Cenpb	exon	ENSMUSG00000068267	ProperStrand	26	1	-10.1915
chr17	56907960	56907995	protein_coding	Dus3l	exon	ENSMUSG00000007603	ProperStrand	3	chr11	68886928	68887018	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-10.4040
chr2	17949197	17949213	protein_coding	A930004D18Rik	utr5	ENSMUSG00000054057	ProperStrand	17	chr9	120038466	120038552	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.4412
chr1	164640850	164640945	protein_coding	Prrc2c	exon	ENSMUSG00000040225	ProperStrand	413	chr17	24665455	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-1.5399
chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	chr4	116826727	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-2.8832
chr15	44082358	44082438	LINE	L1_Mus3	L1	chr15L1_Mus344082239	NonProperStrand	1	chr15	44082525	44082615	LINE	L1_Mus3	L1	chr15L1_Mus344082513	NonProperStrand	1	1	-inf
chr4	131908379	131908459	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr9	96262617	96262707	protein_coding	Atp1b3	intron	ENSMUSG00000032412	ProperStrand	20	1	-9.4741
chr4	147589546	147589563	DNA	MER91B	Tip100	chr4MER91B147589497	NonProperStrand	9	chr13	49779667	49779728	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-10.8838
chr16	21220590	21220755	protein_coding	Ephb3	exon	ENSMUSG00000005958	ProperStrand	23	chr7	117189995	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-5.1578
chr2	90235296	90235345	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	3762250	3762292	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	1	-1.2145
chr2	32881629	32881645	protein_coding	Garnl3	exon	ENSMUSG00000038860	NonProperStrand	54	chr14	76245450	76245480	protein_coding	Tpt1	exon	ENSMUSG00000060126	ProperStrand	236	1	-10.7792
chr9	31134913	31134930	protein_coding	Prdm10	exon	ENSMUSG00000042496	NonProperStrand	6	chrX	34622906	34622954	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-7.7498
chr8	79940974	79941003	protein_coding	Arhgap10	intron	ENSMUSG00000037148	ProperStrand	58	chr5	93035313	93035330	protein_coding	Stbd1	utr3	ENSMUSG00000047963	ProperStrand	9	1	-17.3476
chr1	172612010	172612026	protein_coding	Olfml2b	exon	ENSMUSG00000038463	ProperStrand	57	chr10	23505184	23505234	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.3040
chr9	20326106	20326124	lincRNA	Gm17523	intron	ENSMUSG00000092119	ProperStrand	13	chr4	137298402	137298459	protein_coding	Alpl	exon	ENSMUSG00000028766	ProperStrand	80	1	-15.8578
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr19	38270857	38270875	protein_coding	5730455O13Rik	intron	ENSMUSG00000054237	NonProperStrand	3	1	-14.9656
chr2	146660146	146660163	antisense	Gm14114	.	ENSMUSG00000087618	NonProperStrand	11	chr8	129468757	129468814	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-7.7956
chr11	106544908	106544933	protein_coding	Pecam1	exon	ENSMUSG00000020717	ProperStrand	56	chr14	33005038	33005084	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-4.1237
chr19	25484358	25484374	protein_coding	Kank1	exon	ENSMUSG00000032702	ProperStrand	218	chr2	165646975	165647025	protein_coding	Zmynd8	intron	ENSMUSG00000039671	NonProperStrand	23	1	-12.6677
chr4	46499767	46499784	SINE	ID_B1	B4	chr4ID_B146499735	ProperStrand	33	chr11	101386268	101386320	protein_coding	Brca1	exon	ENSMUSG00000017146	ProperStrand	51	2	-19.2919
chr11	70067503	70067520	protein_coding	Alox12	intron	ENSMUSG00000000320	ProperStrand	16	chr19	8799829	8799855	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-7.5773
chr14	61929496	61929514	protein_coding	Arl11	utr5	ENSMUSG00000043157	ProperStrand	37	chr12	17552968	17553051	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	4	-18.0783
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	81758898	81758915	protein_coding	Lphn3	exon	ENSMUSG00000037605	ProperStrand	19	1	-6.7268
chr14	31998225	31998502	protein_coding	Nisch	exon	ENSMUSG00000021910	ProperStrand	125	chr15	81480963	81480980	protein_coding	Ep300	exon	ENSMUSG00000055024	ProperStrand	118	1	-10.4813
chr17	45707614	45707685	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr17	23687226	23687259	tRNA	tRNA994-ArgCCG	.	668014	ProperStrand	60	1	-6.7300
chr5	5783079	5783194	pseudogene	Gm15459	.	ENSMUSG00000083840	ProperStrand	22	chr16	23110941	23110961	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-8.5055
chr11	69730615	69730643	protein_coding	Eif5a	utr3	ENSMUSG00000078812	ProperStrand	164	chr17	24856620	24856684	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-4.4723
chr12	114167279	114167295	protein_coding	Jag2	exon	ENSMUSG00000002799	ProperStrand	28	chr2	26493367	26493499	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-5.2032
chr2	132387273	132387322	protein_coding	Gpcpd1	intron	ENSMUSG00000027346	ProperStrand	17	chr1	162965531	162965590	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-9.3718
chr9	15130904	15131004	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	chr19	8963027	8963124	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	4	-0.8872
chr2	25312429	25313191	protein_coding	Clic3	exon	ENSMUSG00000015093	ProperStrand	79	chr2	32818889	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	2	-8.1449
chr2	174636656	174636672	LTR	MTEa	MaLR	chr2MTEa174636526	ProperStrand	1	chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	1	-inf
chrX	71039535	71039551	protein_coding	Pdzd4	utr3	ENSMUSG00000002006	NonProperStrand	2	chr4	131908816	131908876	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-8.0336
chr9	107460345	107460553	protein_coding	Rassf1	exon	ENSMUSG00000010067	ProperStrand	1	chr12	106830358	106830374	protein_coding	Bdkrb2	exon	ENSMUSG00000021070	NonProperStrand	2	1	-inf
chr17	47684132	47684149	protein_coding	Ccnd3	intron	ENSMUSG00000034165	NonProperStrand	17	chr7	52382775	52382832	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-9.2943
chr10	38409644	38409662	Simple_repeat	(GA)n	Simple_repeat	chr10(GA)n38409571	ProperStrand	1	chr11	69483237	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-inf
chr9	64024930	64024955	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	chr17	35089181	35089221	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-1.7311
chr16	31797063	31805748	protein_coding	Dlg1	exon	ENSMUSG00000022770	ProperStrand	69	chr4	131908688	131908722	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.0398
chrX	130496426	130496668	protein_coding	Sytl4	exon	ENSMUSG00000031255	ProperStrand	169	chr15	34370620	34370665	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-1.7726
chr11	60272998	60273033	protein_coding	Drg2	exon	ENSMUSG00000020537	ProperStrand	13	chr1	88247743	88247815	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-8.1588
chr6	72738848	72738948	protein_coding	Tcf7l1	utr5	ENSMUSG00000055799	ProperStrand	61	chr11	62416583	62416635	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-5.1342
chr10	6063959	6063977	protein_coding	Akap12	intron	ENSMUSG00000038587	ProperStrand	1008	chr3	46250662	46250678	protein_coding	Pabpc4l	exon	ENSMUSG00000090919	ProperStrand	137	1	-6.0413
chr5	54389949	54389965	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	chr18	37673599	37673615	protein_coding	Pcdhb21	exon	ENSMUSG00000044022	NonProperStrand	23	1	-12.7222
chr14	64119071	64119096	protein_coding	Tdh	exon	ENSMUSG00000021953	ProperStrand	67	chr11	69483136	69483192	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.2638
chr16	35969749	35969767	protein_coding	Parp9	exon	ENSMUSG00000022906	ProperStrand	1	chr7	116664793	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-inf
chr1	154218074	154218164	protein_coding	Tsen15	utr3	ENSMUSG00000014980	ProperStrand	3	chr2	26493414	26493494	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-9.9740
chr4	22414139	22414155	protein_coding	Pou3f2	exon	ENSMUSG00000052621	NonProperStrand	90	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-4.9636
chr9	21548744	21550179	protein_coding	Ldlr	exon	ENSMUSG00000032193	ProperStrand	60	chr16	23110905	23110989	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-0.7998
chr8	86095660	86095740	protein_coding	Tecr	utr3	ENSMUSG00000031708	ProperStrand	100	chr8	86095392	86095482	protein_coding	Ndufb7	utr3	ENSMUSG00000033938	NonProperStrand	2	1	-inf
chr5	73488788	73489477	protein_coding	Fryl	exon	ENSMUSG00000070733	ProperStrand	173	chr2	26493364	26493421	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-1.8997
chr16	11144096	11144232	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chrX	97803518	97803537	protein_coding	Arr3	intron	ENSMUSG00000060890	NonProperStrand	1	1	-inf
chr12	112909982	112910072	protein_coding	Ckb	exon	ENSMUSG00000001270	ProperStrand	28	chr18	35714186	35714266	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.8891
chr19	44188370	44188450	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr10	5989944	5990034	protein_coding	Akap12	utr3	ENSMUSG00000038587	ProperStrand	1008	2	-4.2934
chr5	125498447	125498537	protein_coding	Ncor2	utr3	ENSMUSG00000029478	ProperStrand	377	chr12	88778640	88778720	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-3.0028
chr13	73463407	73463423	protein_coding	Ndufs6	intron	ENSMUSG00000021606	NonProperStrand	52	chr11	98690189	98690244	protein_coding	Casc3	exon	ENSMUSG00000078676	ProperStrand	33	1	-14.8069
chr7	88170056	88170084	protein_coding	Zfp592	exon	ENSMUSG00000005621	ProperStrand	26	chr4	131908236	131908347	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-7.2881
chr8	16913639	16913657	protein_coding	Csmd1	intron	ENSMUSG00000060924	NonProperStrand	25	chr5	92485107	92485219	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	1	-10.5072
chr9	39404708	39404725	protein_coding	AW551984	exon	ENSMUSG00000038112	ProperStrand	11	chr7	116663633	116663691	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-5.7314
chr4	131908372	131908472	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr16	23110987	23111010	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	1	-3.1388
chr2	151335321	151336644	protein_coding	Nsfl1c	exon	ENSMUSG00000027455	ProperStrand	6	chr7	116663680	116663760	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-11.5593
chr17	12585979	12585995	protein_coding	Plg	exon	ENSMUSG00000059481	ProperStrand	86	chr2	26494765	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	4	-8.9410
chr8	115396731	115396749	protein_coding	Cntnap4	intron	ENSMUSG00000031772	ProperStrand	8	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-15.8164
chr2	26494761	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	chr4	41158542	41158569	snoRNA	ENSMUSG00000089308_SNORD121A	.	ENSMUSG00000089308	ProperStrand	209	2	-2.1767
chr16	96266252	96268007	protein_coding	Brwd1	exon	ENSMUSG00000022914	ProperStrand	77	chrX	84483704	84483733	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-7.7507
chr17	45705989	45706027	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr1	59539683	59539700	protein_coding	Fzd7	utr5	ENSMUSG00000041075	ProperStrand	373	1	-3.2329
chr5	111137298	111137824	protein_coding	Ep400	exon	ENSMUSG00000029505	ProperStrand	176	chr3	123210874	123210954	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	10	-12.8610
chr11	95823739	95823856	protein_coding	Igf2bp1	utr3	ENSMUSG00000013415	ProperStrand	140	chr9	120038609	120038642	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-3.0181
chr2	29786806	29786914	protein_coding	Odf2	utr3	ENSMUSG00000026790	ProperStrand	58	chr1	155287312	155287357	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	1	-9.0472
chr3	127599006	127599023	protein_coding	5730508B09Rik	exon	ENSMUSG00000050549	ProperStrand	9	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-11.6174
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr3	113827103	113827119	protein_coding	Col11a1	utr3	ENSMUSG00000027966	NonProperStrand	139	2	-7.1397
chr2	181189245	181189265	protein_coding	Zbtb46	intron	ENSMUSG00000027583	NonProperStrand	4	chr16	23110828	23110966	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-8.2228
chr1	135028343	135028443	protein_coding	Ppp1r15b	exon	ENSMUSG00000046062	ProperStrand	46	chr7	116664872	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.0158
chr15	64013027	64013043	protein_coding	Asap1	intron	ENSMUSG00000022377	NonProperStrand	47	chr2	63936035	63936053	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-8.3500
chr2	147011592	147011610	protein_coding	Nkx2-2	exon	ENSMUSG00000027434	ProperStrand	47	chr5	74489587	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-4.2381
chr8	13416895	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr7	116663633	116663767	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	20	-2.6476
chr19	5796557	5796637	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr12	92811864	92811909	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	4	-10.2830
chr9	61761702	61761728	protein_coding	Rplp1	exon	ENSMUSG00000007892	ProperStrand	116	chr5	108334210	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	2	-6.0645
chr12	17552949	17553091	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr7	118219574	118219694	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	18	-3.4065
chr5	75473198	75473216	protein_coding	Gsx2	utr3	ENSMUSG00000035946	ProperStrand	307	chr18	12233710	12233727	protein_coding	6030446N20Rik	intron	ENSMUSG00000049411	NonProperStrand	3	1	-16.4294
chr19	56949000	56949016	protein_coding	Vwa2	utr5	ENSMUSG00000025082	NonProperStrand	9	chr14	33005038	33005091	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-7.7725
chr7	34990638	35014350	protein_coding	Gpi1	exon	ENSMUSG00000036427	ProperStrand	288	chr11	6428035	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-2.6624
chr7	25757332	25757629	protein_coding	Rabac1	utr5	ENSMUSG00000003380	ProperStrand	19	chr4	116828379	116828456	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-10.7095
chr4	118126743	118126764	protein_coding	Mpl	intron	ENSMUSG00000006389	ProperStrand	3	chr9	120037990	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	3	-inf
chr11	22882185	22882202	protein_coding	Commd1	exon	ENSMUSG00000051355	NonProperStrand	5	chr11	55296276	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-11.3158
chr7	117189971	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	chr12	81492658	81492738	snoRNA	ENSMUSG00000088158_Scarna3b	.	ENSMUSG00000088158	ProperStrand	147	1	-1.8046
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr13	19069019	19069035	protein_coding	Amph	intron	ENSMUSG00000021314	ProperStrand	35	1	-5.5085
chr1	157924323	157924340	protein_coding	Fam163a	utr3	ENSMUSG00000015484	NonProperStrand	13	chr5	130300460	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-12.8632
chr8	13667753	13667804	protein_coding	Rasa3	intron	ENSMUSG00000031453	ProperStrand	22	chr16	90755137	90755209	protein_coding	Urb1	exon	ENSMUSG00000039929	ProperStrand	71	1	-15.0193
chr4	127240853	127240871	lincRNA	A630031M04Rik	intron	ENSMUSG00000087470	NonProperStrand	1	chr18	35716761	35716810	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-inf
chr4	137342641	137342727	protein_coding	Alpl	intron	ENSMUSG00000028766	ProperStrand	80	chr10	23505149	23505200	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-0.8673
chrX	71195343	71195414	protein_coding	Hcfc1	exon	ENSMUSG00000031386	ProperStrand	424	chr10	80642910	80643010	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-2.4466
chr5	34241375	34241391	protein_coding	Whsc2	exon	ENSMUSG00000029111	NonProperStrand	3	chr9	120039577	120039677	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-9.5119
chr4	114714819	114714919	protein_coding	Stil	utr3	ENSMUSG00000028718	ProperStrand	16	chr6	4710199	4710232	protein_coding	Peg10	utr3	ENSMUSG00000092035	ProperStrand	102	1	-14.9334
chr2	26767620	26767916	protein_coding	Rpl7a	exon	ENSMUSG00000062647	ProperStrand	234	chr16	23110463	23110543	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	4	-3.1479
chr4	117882435	117882489	protein_coding	Ptprf	exon	ENSMUSG00000033295	ProperStrand	337	chr1	162966830	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-2.9860
chr1	103911176	103911266	LINE	L1Md_A	L1	chr1L1Md_A103906428	ProperStrand	1	chr7	54442938	54443018	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-inf
chr13	104899584	104899636	protein_coding	Nln	utr5	ENSMUSG00000021710	ProperStrand	47	chr10	66681799	66681815	protein_coding	Jmjd1c	exon	ENSMUSG00000037876	NonProperStrand	9	1	-17.8539
chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	chr5	109021359	109021377	protein_coding	Gak	exon	ENSMUSG00000062234	NonProperStrand	2	1	-18.7816
chr18	32227551	32227591	protein_coding	Iws1	utr5	ENSMUSG00000024384	ProperStrand	72	chr18	12172461	12172477	protein_coding	6030446N20Rik	intron	ENSMUSG00000049411	ProperStrand	235	1	-10.2094
chr18	16800317	16800335	protein_coding	Cdh2	intron	ENSMUSG00000024304	ProperStrand	71	chr17	35089182	35089235	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-5.1573
chr1	95590661	95590753	protein_coding	Bok	exon	ENSMUSG00000026278	ProperStrand	7	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	2	-18.8827
chr10	75322908	75322938	protein_coding	Mif	utr5	ENSMUSG00000033307	ProperStrand	146	chr17	6232006	6232022	protein_coding	Tulp4	exon	ENSMUSG00000034377	NonProperStrand	265	1	-8.5550
chr12	81499802	81499828	protein_coding	Dcaf5	exon	ENSMUSG00000049106	ProperStrand	23	chr10	23505152	23505214	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.7622
chr10	72136994	72137040	protein_coding	Zwint	utr3	ENSMUSG00000019923	ProperStrand	22	chr4	131908810	131908887	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.8292
chr4	125919262	125919325	protein_coding	Mtap7d1	exon	ENSMUSG00000028849	ProperStrand	8	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-7.5918
chrX	19683228	19683244	protein_coding	Slc9a7	exon	ENSMUSG00000037341	NonProperStrand	136	chr7	51505224	51505285	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	1	-6.5259
chr9	58067185	58067275	protein_coding	Pml	utr3	ENSMUSG00000036986	ProperStrand	45	chr16	23111755	23111811	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.3757
chr17	53753049	53753066	protein_coding	Kat2b	intron	ENSMUSG00000000708	ProperStrand	26	chr6	135028675	135028726	protein_coding	Gprc5a	exon	ENSMUSG00000046733	ProperStrand	7	1	-22.6056
chr5	89663839	89663855	protein_coding	Slc4a4	exon	ENSMUSG00000060961	NonProperStrand	195	chr2	158185580	158185652	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-4.2012
chr7	20281801	20281834	protein_coding	Apoe	exon	ENSMUSG00000002985	ProperStrand	231	chr17	46285129	46285145	protein_coding	Mad2l1bp	exon	ENSMUSG00000034509	NonProperStrand	67	1	-10.3882
chr1	153526799	153526819	protein_coding	Fam129a	intron	ENSMUSG00000026483	ProperStrand	21	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.2774
chr2	155923898	155923947	protein_coding	Rbm12	exon	ENSMUSG00000089824	ProperStrand	26	chr16	23110456	23110546	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.9778
chr9	56775853	56775870	protein_coding	Snx33	utr5	ENSMUSG00000032733	NonProperStrand	116	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-7.6102
chr8	73058796	73058849	protein_coding	Fkbp8	exon	ENSMUSG00000019428	ProperStrand	52	chr2	76689736	76689752	protein_coding	Ttn	exon	ENSMUSG00000051747	ProperStrand	66	1	-13.4111
chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr6	145564547	145564563	protein_coding	Tuba3b	utr5	ENSMUSG00000067338	ProperStrand	152	1	-4.6433
chr11	78313939	78313956	protein_coding	Vtn	exon	ENSMUSG00000017344	ProperStrand	188	chr4	116826705	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-4.5546
chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-6.1213
chr11	23411563	23411653	LTR	ORR1D1	MaLR	chr11ORR1D123411375	NonProperStrand	1	chr11	23411751	23411831	LTR	RMER13B	ERVK	chr11RMER13B23411649	NonProperStrand	1	1	-inf
chr8	125627224	125627850	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	chr9	15119736	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	4	-3.5479
chr19	5950911	5950996	protein_coding	Pola2	intron	ENSMUSG00000024833	ProperStrand	29	chr17	24857725	24857815	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.5901
chr8	49075451	49075544	protein_coding	Wwc2	exon	ENSMUSG00000031563	ProperStrand	37	chr13	67393543	67393563	protein_coding	Zfp457	exon	ENSMUSG00000055341	ProperStrand	2	1	-inf
chr7	118223764	118223801	protein_coding	Eif4g2	exon	ENSMUSG00000005610	ProperStrand	134	chr7	29136601	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.1424
chr14	14949390	14949413	protein_coding	Psmd6	exon	ENSMUSG00000021737	ProperStrand	10	chr3	96025814	96025831	protein_coding	Hist2h2be	utr3	ENSMUSG00000068854	ProperStrand	3	1	-inf
chr6	114966228	114966312	protein_coding-noncoding	1500001M20Rik	utr3	ENSMUSG00000030316	ProperStrand	1	chr16	23110965	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr8	127245715	127245787	protein_coding	Ttc13	utr5	ENSMUSG00000037300	ProperStrand	20	chr1	71341491	71341508	protein_coding	Abca12	exon	ENSMUSG00000050296	NonProperStrand	143	1	-13.7977
chr14	51427302	51427392	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr15	79908956	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	3	-1.9133
chr3	96363903	96364682	protein_coding	Txnip	utr3	ENSMUSG00000038393	ProperStrand	172	chr11	97642954	97643074	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-1.8193
chr13	14403470	14403487	protein_coding	Hecw1	intron	ENSMUSG00000021301	ProperStrand	15	chr11	69481412	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.8683
chr8	108187966	108205865	protein_coding	Ctcf	utr3	ENSMUSG00000005698	ProperStrand	75	chr10	23505150	23505270	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-3.0844
chr8	75782974	75782992	protein_coding	Large	intron	ENSMUSG00000004383	ProperStrand	48	chr2	172825858	172825875	protein_coding	Rae1	utr5	ENSMUSG00000027509	NonProperStrand	44	1	-14.3894
chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	chr11	69481335	69481410	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-1.0633
chr7	13615277	13615313	protein_coding	Trim28	exon	ENSMUSG00000005566	ProperStrand	296	chr11	48616643	48616707	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	1	-6.1758
chr18	20123591	20123608	protein_coding	Dsc3	intron	ENSMUSG00000059898	ProperStrand	31	chr7	52382234	52382254	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-9.6128
chr16	37777391	37777408	protein_coding	Fstl1	exon	ENSMUSG00000022816	ProperStrand	179	chr7	117166725	117166752	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-2.7920
chr2	67990145	67990235	LINE	L1MC1	L1	chr2L1MC167989782	ProperStrand	1	chr2	67990533	67990613	LINE	L1MC1	L1	chr2L1MC167990402	ProperStrand	1	1	-inf
chr9	75003407	75003437	protein_coding	Myo5a	intron	ENSMUSG00000034593	ProperStrand	89	chr11	101466255	101466351	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	1	-8.0832
chr11	62416470	62416492	lincRNA	2410006H16Rik	exon	ENSMUSG00000086841	ProperStrand	525	chr3	36465042	36465095	protein_coding	Ccna2	utr3	ENSMUSG00000027715	ProperStrand	74	1	-8.5515
chr2	4829164	4829180	protein_coding	Sephs1	utr3	ENSMUSG00000026662	NonProperStrand	271	chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-3.5588
chr16	32173905	32174005	LTR	RMER13A	ERVK	chr16RMER13A32173523	NonProperStrand	1	chr2	73706013	73706089	protein_coding	Atf2	intron	ENSMUSG00000027104	ProperStrand	37	1	-inf
chr15	36528744	36528996	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr2	158185577	158185655	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	2	-2.8812
chr11	76025516	76025562	protein_coding	Glod4	utr3	ENSMUSG00000017286	ProperStrand	23	chr4	131865881	131865981	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.4190
chr17	35384119	35384171	snoRNA	ENSMUSG00000065273_SNORD83	.	ENSMUSG00000065273	ProperStrand	244	chr6	71832550	71832577	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-2.9707
chr2	90235303	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr15	58577335	58577351	protein_coding	Fer1l6	intron	ENSMUSG00000037106	ProperStrand	54	1	-4.6647
chr11	78510657	78510741	protein_coding	Nlk	utr5	ENSMUSG00000017376	ProperStrand	26	chr18	37911790	37911806	protein_coding	Pcdhga9	intron	ENSMUSG00000023036	ProperStrand	245	1	-12.1843
chr8	125095740	125095880	protein_coding	Cdt1	exon	ENSMUSG00000006585	ProperStrand	47	chr9	70258470	70258560	protein_coding	Ccnb2	exon	ENSMUSG00000032218	ProperStrand	54	1	-14.0232
chr1	195125728	195125745	LINE	L2a	L2	chr1L2a195125465	NonProperStrand	28	chr9	59518474	59518503	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	1	-8.7082
chr11	72503524	72525662	protein_coding	Ankfy1	utr5	ENSMUSG00000020790	ProperStrand	68	chr9	50816824	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	1	-11.5558
chr7	116662711	116663108	protein_coding	Rpl27a	utr5	ENSMUSG00000046364	ProperStrand	149	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-3.4777
chr7	52593931	52594034	protein_coding	Hrc	intron	ENSMUSG00000038239	NonProperStrand	2	chr11	58768212	58768271	protein_coding	Hist3h2a	utr5	ENSMUSG00000078851	ProperStrand	67	1	-20.5851
chr3	108357279	108357359	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	chr13	90238633	90238723	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	1	-0.7472
chr8	111261907	111262012	protein_coding	Zfhx3	intron	ENSMUSG00000038872	ProperStrand	65	chr17	35087939	35087962	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	4	-15.6983
chr6	83290210	83290227	protein_coding	Mob1a	exon	ENSMUSG00000043131	ProperStrand	7	chr7	54101956	54102001	protein_coding	Ldha	intron	ENSMUSG00000063229	ProperStrand	280	1	-14.6595
chr16	23111372	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	chr11	51551338	51551430	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	20	-1.4803
chr11	98903062	98909542	protein_coding	Igfbp4	exon	ENSMUSG00000017493	ProperStrand	27	chr7	117189952	117190001	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.8434
chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	chr1	102076753	102076790	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	1	-4.6973
chr11	35853255	35853271	protein_coding	Odz2	exon	ENSMUSG00000049336	ProperStrand	106	chr19	8963026	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.3898
chr1	133421609	133421699	protein_coding	Srgap2	utr5	ENSMUSG00000026425	ProperStrand	299	chr2	32818808	32818888	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-2.4923
chr4	133309717	133309807	protein_coding	Arid1a	intron	ENSMUSG00000007880	ProperStrand	465	chr4	134392328	134393781	protein_coding	Tmem57	exon	ENSMUSG00000028826	ProperStrand	16	2	-18.2452
chr12	28566353	28566374	DNA	Charlie22a	MER1_type	chr12Charlie22a28566346	NonProperStrand	1	chr2	130102034	130102082	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-inf
chr10	20080843	20080860	protein_coding	Fam54a	utr3	ENSMUSG00000019992	ProperStrand	232	chr7	13433780	13433801	protein_coding	Zfp110	exon	ENSMUSG00000058638	ProperStrand	6	1	-15.3362
chr15	41620675	41620692	protein_coding	Oxr1	exon	ENSMUSG00000022307	ProperStrand	21	chr17	35089181	35089228	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-7.5760
chr17	23955820	23955837	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	chr7	116663634	116663724	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-2.1598
chr1	188920783	188920800	protein_coding	Spata17	intron	ENSMUSG00000026611	ProperStrand	7	chr16	23110874	23110919	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.4785
chr10	40307396	40307412	protein_coding	Slc22a16	exon	ENSMUSG00000019834	NonProperStrand	11	chr5	127854346	127854367	protein_coding	Tmem132c	intron	ENSMUSG00000034324	ProperStrand	25	1	-18.2070
chr17	24615989	24616006	protein_coding	Mlst8	utr5	ENSMUSG00000024142	NonProperStrand	40	chr19	8963027	8963088	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.9778
chr4	131826039	131826129	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	chr9	120037974	120038054	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-1.2034
chr14	33153227	33153832	protein_coding	Ogdhl	exon	ENSMUSG00000021913	ProperStrand	182	chr16	37777390	37777408	protein_coding	Fstl1	exon	ENSMUSG00000022816	ProperStrand	179	1	-8.8972
chr5	52575875	52575926	protein_coding	Dhx15	exon	ENSMUSG00000029169	ProperStrand	53	chr11	113207970	113207995	protein_coding	Slc39a11	intron	ENSMUSG00000041654	NonProperStrand	39	3	-18.8644
chr6	94072622	94072696	protein_coding	Magi1	intron	ENSMUSG00000045095	ProperStrand	106	chr4	131866186	131866276	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	4	-9.3773
chr8	28163689	28163770	protein_coding	Prosc	intron	ENSMUSG00000031485	ProperStrand	14	chr2	130103450	130103501	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	6	-inf
chr5	101221855	101225397	protein_coding	Helq	exon	ENSMUSG00000035266	ProperStrand	6	chr1	42755254	42755270	protein_coding	Pou3f3	exon	ENSMUSG00000045515	NonProperStrand	117	1	-16.6253
chr8	86453794	86463744	protein_coding	Lphn1	exon	ENSMUSG00000013033	ProperStrand	221	chr4	131908687	131908852	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-1.5590
chr12	111932239	111932262	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-2.2428
chr11	55302683	55305512	protein_coding	G3bp1	exon	ENSMUSG00000018583	ProperStrand	106	chr9	48148720	48148737	protein_coding	Fam55b	utr5	ENSMUSG00000032028	ProperStrand	25	1	-13.9429
chrX	139155042	139155059	protein_coding	Tmem164	intron	ENSMUSG00000047045	NonProperStrand	29	chr7	109272794	109272812	protein_coding	Nup98	exon	ENSMUSG00000063550	ProperStrand	100	1	-13.7618
chr5	30790882	30790898	protein_coding	Cib4	exon	ENSMUSG00000053194	ProperStrand	31	chr9	15118245	15118321	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-4.7160
chr5	124798636	124798674	protein_coding	Cdk2ap1	exon	ENSMUSG00000029394	ProperStrand	22	chr4	131865919	131865979	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.5019
chr3	68376569	68429766	protein_coding	Schip1	exon	ENSMUSG00000027777	ProperStrand	70	chr16	23110833	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	13	-13.9795
chr6	4706529	4706619	protein_coding	Peg10	exon	ENSMUSG00000092035	NonProperStrand	3	chr11	69483144	69483234	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	NonProperStrand	35	1	-inf
chr5	100855902	100855954	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr19	7110060	7110160	protein_coding	Stip1	exon	ENSMUSG00000024966	ProperStrand	100	1	-5.6326
chr11	6256148	6256248	protein_coding	Ogdh	utr3	ENSMUSG00000020456	ProperStrand	42	chr2	130103454	130103500	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-8.7789
chr9	7818263	7818283	protein_coding	Birc2	utr3	ENSMUSG00000057367	ProperStrand	12	chr4	131908689	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.9639
chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	chr17	24856620	24856720	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	4	-8.1035
chr13	74647488	74647531	Unknown	MurSatRep1	Unknown	chr13MurSatRep174647203	ProperStrand	1	chr17	21102588	21102618	protein_coding	Ppp2r1a	utr3	ENSMUSG00000007564	ProperStrand	57	1	-inf
chr11	75376689	75377151	protein_coding	Slc43a2	exon	ENSMUSG00000038178	ProperStrand	45	chr14	33005209	33005237	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	10	-inf
chr4	140277147	140277247	protein_coding	Rcc2	utr3	ENSMUSG00000040945	ProperStrand	228	chr19	8799855	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	3	-6.5495
chr11	52162898	52162918	SINE	PB1	Alu	chr11PB152162843	NonProperStrand	1	chr18	33954895	33954951	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-inf
chr7	151765212	151765228	antisense	Gm10574	.	ENSMUSG00000073778	ProperStrand	357	chr17	29230601	29230620	protein_coding	Cdkn1a	intron	ENSMUSG00000023067	NonProperStrand	11	1	-13.2055
chr2	128659944	128663115	protein_coding	Tmem87b	exon	ENSMUSG00000014353	ProperStrand	10	chr12	110923175	110923231	snoRNA	ENSMUSG00000084487_SNORD113	.	ENSMUSG00000084487	ProperStrand	183	1	-14.7395
chr2	90235312	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	119213484	119213501	protein_coding	Sgsh	intron	ENSMUSG00000005043	NonProperStrand	15	1	-7.2074
chr5	108535856	108535956	protein_coding	Mtf2	exon	ENSMUSG00000029267	ProperStrand	39	chr11	55296262	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-7.0353
chr9	66247161	66247247	protein_coding	Herc1	exon	ENSMUSG00000038664	ProperStrand	81	chr4	131866169	131866259	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-3.1168
chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-5.0677
chr6	86338880	86338946	protein_coding	Pcyox1	exon	ENSMUSG00000029998	ProperStrand	17	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-10.7134
chr8	80126806	80128595	protein_coding	Tmem184c	exon	ENSMUSG00000031617	ProperStrand	5	chr11	88846347	88849298	protein_coding	Coil	exon	ENSMUSG00000033983	ProperStrand	9	1	-18.9379
chr2	32991410	32991468	protein_coding	Ralgps1	utr3	ENSMUSG00000038831	ProperStrand	75	chr17	24857802	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.9322
chr10	75120176	75120569	protein_coding	Cabin1	exon	ENSMUSG00000020196	ProperStrand	62	chr4	41158542	41158607	snoRNA	ENSMUSG00000089308_SNORD121A	.	ENSMUSG00000089308	ProperStrand	209	4	-23.2262
chr9	120038553	120038674	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	chr2	144087329	144087463	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	14	-2.2598
chr12	104662580	104662655	protein_coding	Ddx24	exon	ENSMUSG00000041645	ProperStrand	34	chr4	131908689	131908717	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-3.7692
chr14	103684523	103684541	protein_coding	Mycbp2	exon	ENSMUSG00000033004	ProperStrand	129	chr5	130295415	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-3.7894
chr6	142211245	142214830	protein_coding	Slco1a5	exon	ENSMUSG00000063975	NonProperStrand	38	chr17	95160908	95218242	protein_coding	2610044O15Rik	exon	ENSMUSG00000066057	NonProperStrand	70	1	-13.9296
chr11	106645444	106645795	protein_coding	Ddx5	exon	ENSMUSG00000020719	ProperStrand	181	chr7	117190017	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-1.4914
chr4	153979747	153979765	protein_coding	Prdm16	intron	ENSMUSG00000039410	NonProperStrand	18	chr11	48614367	48614434	snoRNA	ENSMUSG00000064500_SNORD95	.	ENSMUSG00000064500	ProperStrand	100	2	-inf
chr4	155135128	155135145	protein_coding	Atad3a	utr5	ENSMUSG00000029036	ProperStrand	28	chr2	84530865	84531297	protein_coding	Zdhhc5	exon	ENSMUSG00000034075	NonProperStrand	144	1	-13.0985
chr16	38417222	38417242	protein_coding	Pla1a	exon	ENSMUSG00000002847	ProperStrand	32	chr18	35714163	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	19	-20.2832
chr4	43505656	43505718	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr4	131780593	131780693	protein_coding	Gmeb1	utr3	ENSMUSG00000028901	ProperStrand	15	1	-5.7264
chr15	88994535	88994714	protein_coding	Plxnb2	exon	ENSMUSG00000036606	ProperStrand	119	chr11	69483162	69483252	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	4	-5.7921
chr11	102294588	102294607	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr10	79632587	79632808	protein_coding	Cirbp	exon	ENSMUSG00000045193	ProperStrand	3	1	-15.2871
chr6	47738066	47738092	misc_RNA	Y_RNA	.	ENSMUSG00000065701	ProperStrand	129	chr2	91436261	91436324	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	3	-13.7548
chr11	60275020	60275063	protein_coding	Drg2	exon	ENSMUSG00000020537	ProperStrand	13	chr1	162967536	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	3	-15.0184
chr3	110053536	110053580	protein_coding	Prmt6	exon	ENSMUSG00000049300	ProperStrand	4	chr4	131908363	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-6.5415
chr10	79138266	79138282	protein_coding	Gm16517	exon	ENSMUSG00000020308	ProperStrand	43	chr10	23505151	23505237	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.7183
chr11	70341175	70341265	protein_coding-noncoding	Psmb6	utr5	ENSMUSG00000018286	ProperStrand	1	chr11	70340971	70341061	protein_coding	Psmb6	exon	ENSMUSG00000018286	ProperStrand	11	1	-inf
chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr1	102076757	102076799	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	4	-3.3607
chr5	117813700	117813716	protein_coding	Wsb2	exon	ENSMUSG00000029364	NonProperStrand	9	chr5	112865460	112865476	protein_coding	Sez6l	exon	ENSMUSG00000058153	ProperStrand	81	1	-16.5754
chr17	85105347	85106484	protein_coding	Lrpprc	exon	ENSMUSG00000024120	ProperStrand	98	chr17	24857717	24857807	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.5223
chr18	6034455	6034471	protein_coding	Arhgap12	exon	ENSMUSG00000041225	ProperStrand	25	chr19	8963119	8963181	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.8447
chr9	114526929	114527029	protein_coding	Cnot10	exon	ENSMUSG00000056167	ProperStrand	16	chr8	73419657	73419727	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-5.6620
chr15	72961443	72968463	protein_coding	Eif2c2	exon	ENSMUSG00000036698	ProperStrand	154	chr8	32260334	32260424	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	5	-12.8114
chr3	142473361	142473448	protein_coding	Pkn2	exon	ENSMUSG00000004591	ProperStrand	28	chr9	15119305	15119395	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-6.6119
chr2	119430595	119430626	lincRNA	1700020I14Rik	exon	ENSMUSG00000085438	ProperStrand	15	chr6	28367610	28367700	protein_coding	Gcc1	utr3	ENSMUSG00000029708	ProperStrand	5	1	-20.3414
chr5	117772601	117772667	protein_coding	Vsig10	intron	ENSMUSG00000066894	ProperStrand	11	chr1	162968465	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-9.5125
chr16	89738138	89738154	LTR	LTR16C	ERVL	chr16LTR16C89737840	NonProperStrand	12	chr5	125509151	125509168	protein_coding	Ncor2	exon	ENSMUSG00000029478	ProperStrand	377	1	-12.9141
chr2	179911414	179911438	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr15	10504979	10504995	protein_coding	Rai14	exon	ENSMUSG00000022246	ProperStrand	180	1	-7.5027
chr1	93263065	93263083	protein_coding	Fam132b	exon	ENSMUSG00000047443	NonProperStrand	98	chr1	181027187	181027205	protein_coding	Smyd3	intron	ENSMUSG00000055067	ProperStrand	231	1	-9.6254
chr3	97817679	97851652	protein_coding	Notch2	exon	ENSMUSG00000027878	ProperStrand	86	chr18	20123591	20123608	protein_coding	Dsc3	intron	ENSMUSG00000059898	ProperStrand	31	1	-13.9259
chr2	151969804	151974461	protein_coding	Tcf15	exon	ENSMUSG00000068079	ProperStrand	4	chr7	29136600	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-7.7378
chr13	63403506	63403582	protein_coding	2010111I01Rik	utr3	ENSMUSG00000021458	ProperStrand	32	chr16	23110911	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-6.3608
chr15	37913842	38008383	protein_coding	Ubr5	exon	ENSMUSG00000037487	ProperStrand	258	chr15	98350146	98350283	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	3	-5.7546
chr6	108443832	108443849	protein_coding	Itpr1	exon	ENSMUSG00000030102	ProperStrand	94	chr17	28465802	28465934	protein_coding	Rpl10a	exon	ENSMUSG00000037805	ProperStrand	121	1	-11.0023
chr6	38461892	38461908	protein_coding	Ubn2	utr3	ENSMUSG00000038538	ProperStrand	86	chr11	69481384	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	3	-6.7307
chr2	121949511	121949527	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	chr2	181405343	181405359	protein_coding	Sox18	exon	ENSMUSG00000046470	ProperStrand	96	1	-9.3553
chr1	173332298	173332314	protein_coding	Arhgap30	exon	ENSMUSG00000048865	NonProperStrand	15	chr11	116299448	116299503	protein_coding	Fam100b	exon	ENSMUSG00000050628	ProperStrand	97	1	-15.1807
chr17	26096165	26096255	protein_coding	Solh	utr3	ENSMUSG00000037326	ProperStrand	53	chr11	68886963	68887043	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-4.3796
chr2	90235298	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	124691242	124691296	protein_coding	Grcc10	utr5	ENSMUSG00000072772	ProperStrand	88	2	-6.3220
chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr2	118611946	118611962	protein_coding	Disp2	exon	ENSMUSG00000040035	NonProperStrand	204	1	-4.0860
chr16	23110959	23111033	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr19	10689439	10690030	protein_coding	Ddb1	exon	ENSMUSG00000024740	ProperStrand	304	9	-19.3882
chr6	143151992	143152022	protein_coding	Etnk1	utr3	ENSMUSG00000030275	ProperStrand	61	chr8	32260335	32260402	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-4.5982
chr7	72471241	72473850	protein_coding	Tjp1	exon	ENSMUSG00000030516	ProperStrand	78	chr3	88714568	88714586	protein_coding	Msto1	exon	ENSMUSG00000068922	ProperStrand	36	4	-inf
chr2	27954905	27954923	lincRNA	F730016J06Rik	intron	ENSMUSG00000086425	NonProperStrand	21	chr11	106362562	106362635	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-9.5207
chr14	112754133	112754154	LINE	Lx4B	L1	chr14Lx4B112753525	NonProperStrand	4	chr4	131908250	131908340	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-6.5415
chr2	31924012	31924028	protein_coding	Fam78a	utr3	ENSMUSG00000050592	NonProperStrand	340	chr12	17552949	17553000	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-1.9559
chr15	7145511	7145574	protein_coding	Lifr	utr3	ENSMUSG00000054263	ProperStrand	64	chr16	23111405	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-3.6409
chr11	74473548	74473645	protein_coding	1300001I01Rik	intron	ENSMUSG00000020741	ProperStrand	76	chr9	64022882	64022923	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	4	-19.0870
chr10	92339476	92339492	protein_coding	Gm872	intron	ENSMUSG00000020014	ProperStrand	14	chr10	23505220	23505279	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.6795
chr18	39428790	39428806	protein_coding	Arhgap26	intron	ENSMUSG00000036452	ProperStrand	46	chr6	86475445	86475469	protein_coding	Pcbp1	exon	ENSMUSG00000051695	ProperStrand	108	1	-12.6689
chr17	66468411	66468427	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	chrX	34622930	34623037	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-1.2932
chr5	130473677	130473758	protein_coding	Gusb	exon	ENSMUSG00000025534	ProperStrand	16	chr7	118219704	118219725	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-6.7705
chr4	116826922	116826948	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	chr15	98350193	98350283	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	4	-7.8516
chr15	97811251	97811267	protein_coding	Col2a1	exon	ENSMUSG00000022483	ProperStrand	34	chr10	127522666	127523135	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	1	-9.8100
chr10	79472771	79472976	protein_coding	Abca7	exon	ENSMUSG00000035722	ProperStrand	12	chr11	68886932	68887012	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-7.3320
chr19	38869531	38869547	protein_coding	Noc3l	exon	ENSMUSG00000024999	NonProperStrand	149	chr10	90580008	90580057	protein_coding	Slc25a3	exon	ENSMUSG00000061904	ProperStrand	74	1	-11.0661
chr16	85802545	85802562	protein_coding	Adamts1	exon	ENSMUSG00000022893	ProperStrand	102	chr10	106266059	106266075	protein_coding	Ppfia2	exon	ENSMUSG00000053825	ProperStrand	20	1	-14.4732
chr4	43505657	43505682	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr8	87369784	87369851	protein_coding	Calr	exon	ENSMUSG00000003814	ProperStrand	232	3	-3.0985
chr2	152719336	152719436	protein_coding	Tpx2	utr3	ENSMUSG00000027469	ProperStrand	111	chr17	35088957	35088976	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	3	-11.0996
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	1	-4.3313
chr16	22381508	22381591	protein_coding	Etv5	utr3	ENSMUSG00000013089	ProperStrand	88	chr5	121655021	121655083	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.0480
chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	chr1	162966812	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	2	-5.4521
chr3	33966442	33966474	protein_coding	Fxr1	intron	ENSMUSG00000027680	ProperStrand	58	chr16	23111689	23111779	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-3.5558
chr6	24905580	24905596	protein_coding	Tmem229a	exon	ENSMUSG00000090045	NonProperStrand	1	chr14	31827480	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-inf
chr5	135857995	135858011	protein_coding	Pom121	exon	ENSMUSG00000053293	NonProperStrand	94	chr7	117189863	117189909	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-5.3298
chr6	47753438	47753485	protein_coding	Pdia4	exon	ENSMUSG00000025823	ProperStrand	41	chr17	35089181	35089237	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	2	-10.1257
chr5	94624151	94624208	LINE	L1Md_A	L1	chr5L1Md_A94618001	ProperStrand	1	chr15	63969559	63969575	protein_coding	Asap1	exon	ENSMUSG00000022377	NonProperStrand	47	1	-inf
chr2	90235295	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr14	66342756	66342772	protein_coding	Scara5	intron	ENSMUSG00000022032	ProperStrand	30	2	-9.5029
chr4	125853545	125855123	protein_coding	Thrap3	exon	ENSMUSG00000043962	ProperStrand	84	chr19	8799844	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-4.3020
chr11	120347051	120349421	protein_coding	Mrpl12	exon	ENSMUSG00000039640	ProperStrand	49	chr14	76247752	76247778	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-4.5582
chr13	100181906	100181923	protein_coding	Mrps27	intron	ENSMUSG00000041632	ProperStrand	21	chr14	65372765	65372867	snoRNA	ENSMUSG00000064442_SNORA36	.	ENSMUSG00000064442	ProperStrand	296	5	-20.6567
chr11	102547417	102547448	protein_coding	Ccdc43	utr3	ENSMUSG00000020925	ProperStrand	26	chr15	34370545	34370607	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	4	-16.1371
chr11	75562735	75578706	protein_coding	Ywhae	utr3	ENSMUSG00000020849	ProperStrand	176	chr7	29136525	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-1.6457
chr17	39985196	39985763	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr7	150717298	150717416	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	4	-1.0937
chr2	164598049	164598066	protein_coding	Ube2c	utr3	ENSMUSG00000001403	ProperStrand	40	chr5	115939535	115939587	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-8.6785
chr2	166721862	166721894	protein_coding	Arfgef2	utr3	ENSMUSG00000074582	ProperStrand	32	chr10	107800720	107800810	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	1	-9.3348
chr7	95645853	95645933	LINE	L1Md_F2	L1	chr7L1Md_F295645750	NonProperStrand	1	chr3	17451162	17451252	LTR	ORR1E	MaLR	chr3ORR1E17451158	NonProperStrand	1	1	-inf
chr17	45708422	45708495	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr9	15130765	15130827	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	4	-9.8626
chr9	86649796	86649840	protein_coding	Prss35	utr3	ENSMUSG00000033491	ProperStrand	5	chr7	51503475	51503549	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	5	-inf
chr11	69418660	69418708	protein_coding	Atp1b2	intron	ENSMUSG00000041329	ProperStrand	28	chr17	24857781	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.6557
chr9	40613062	40613116	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr16	90386825	90386858	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	2	-11.3237
chr1	109550371	109550393	LINE	Lx5	L1	chr1Lx5109550349	ProperStrand	1	chr1	33964302	33964320	protein_coding	Bend6	intron	ENSMUSG00000042182	ProperStrand	2	1	-inf
chr18	63851817	63851872	protein_coding	Txnl1	utr5	ENSMUSG00000024583	ProperStrand	7	chrX	148707874	148707948	protein_coding	Kdm5c	utr3	ENSMUSG00000025332	ProperStrand	139	1	-16.0027
chr2	121282863	121282879	protein_coding	2310003F16Rik	exon	ENSMUSG00000027245	ProperStrand	40	chr11	6428103	6428154	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.9420
chr8	40134486	40134503	protein_coding	Tusc3	exon	ENSMUSG00000039530	ProperStrand	15	chr11	69481387	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-9.6421
chr14	55031734	55031793	protein_coding	Slc7a7	intron	ENSMUSG00000000958	ProperStrand	44	chr11	68854483	68854558	tRNA	tRNA397-AspGTC	.	1613327	ProperStrand	4	1	-inf
chr2	113933855	113933871	protein_coding	Aqr	exon	ENSMUSG00000040383	ProperStrand	70	chr2	22443231	22443259	pseudogene	Gm13341	.	ENSMUSG00000083863	ProperStrand	1	1	-inf
chr9	44197538	44198951	protein_coding	Hyou1	exon	ENSMUSG00000032115	ProperStrand	145	chr19	8799829	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	10	-19.6802
chr17	71210560	71210622	antisense	RP23-85E24.1	.	ENSMUSG00000093514	ProperStrand	5	chr8	3803252	3803342	misc_RNA	RNaseP_nuc	.	ENSMUSG00000088025	ProperStrand	328	1	-15.0658
chr5	73563222	73563238	protein_coding	Fryl	intron	ENSMUSG00000070733	ProperStrand	173	chr2	130102015	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-3.3527
chr4	137149715	137149732	protein_coding	Usp48	utr5	ENSMUSG00000043411	NonProperStrand	10	chr18	75161683	75161713	protein_coding	Rpl17	exon	ENSMUSG00000062328	ProperStrand	90	1	-16.1631
chr10	30791769	30791789	SINE	B4A	B4	chr10B4A30791590	NonProperStrand	1	chr18	35716694	35716762	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-inf
chr19	8799025	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	chr9	15130919	15130987	snoRNA	ENSMUSG00000077394_snoU2_19	.	ENSMUSG00000077394	ProperStrand	96	1	-4.9176
chr11	77656609	77656699	protein_coding	Myo18a	exon	ENSMUSG00000000631	ProperStrand	124	chr12	17552966	17553056	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	2	-6.2705
chr12	112779157	112779277	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	NonProperStrand	10	chr18	35716832	35716850	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	NonProperStrand	45	2	-inf
chr3	87717355	87718070	protein_coding	Hdgf	exon	ENSMUSG00000004897	ProperStrand	117	chr19	8800363	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	5	-11.0748
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr8	87574106	87574149	snoRNA	ENSMUSG00000077527_SNORD41	.	ENSMUSG00000077527	ProperStrand	29	1	-8.4852
mmu-miR-7033-5p	3	19	miRNA	mmu-miR-7033-5p	.	mmu-miR-7033-5p	ProperStrand	25	chr12	102297023	102297040	protein_coding	Smek1	exon	ENSMUSG00000041846	ProperStrand	66	1	-14.8923
chr11	48615566	48615609	snoRNA	ENSMUSG00000064725_Snord96a	.	ENSMUSG00000064725	ProperStrand	89	chr4	56910495	56910595	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-5.3348
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	62686883	62686899	protein_coding	Trim16	utr3	ENSMUSG00000047821	NonProperStrand	5	1	-9.5409
chr16	15626145	15637297	protein_coding	Mcm4	exon	ENSMUSG00000022673	ProperStrand	51	chr16	23110909	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-5.3684
chr9	78214890	78214951	protein_coding	Dppa5a	utr3	ENSMUSG00000060461	ProperStrand	79	chr2	32818815	32818905	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-4.9364
chr13	79154834	79154924	LINE	L1Md_F	L1	chr13L1Md_F79154576	NonProperStrand	2	chr7	54442549	54442629	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	1	-19.4819
chr1	133831296	133831357	protein_coding	Nucks1	utr3	ENSMUSG00000026434	ProperStrand	59	chr15	82725599	82725635	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	1	-8.5560
chr11	72018688	72018713	protein_coding	4933427D14Rik	intron	ENSMUSG00000020807	ProperStrand	13	chr1	154963301	154963347	protein_coding	Nmnat2	utr3	ENSMUSG00000042751	ProperStrand	39	1	-17.1847
chr11	51520741	51522448	protein_coding	Sec24a	exon	ENSMUSG00000036391	ProperStrand	42	chr7	19886663	19886679	tRNA	tRNA86-SeCTCA	.	281299	ProperStrand	34	1	-15.1748
chr6	113573895	113573920	Simple_repeat	(CCCCG)n	Simple_repeat	chr6(CCCCG)n113573890	NonProperStrand	2	chr12	106269285	106269385	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	2	-inf
chr6	112568872	112568912	LTR	MLT1B	MaLR	chr6MLT1B112568679	NonProperStrand	2	chr11	69483181	69483271	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-inf
chr3	52388277	52388294	SINE	B4A	B4	chr3B4A52388218	ProperStrand	169	chr11	6428108	6428156	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.4784
chr16	20740064	20740081	protein_coding	Chrd	exon	ENSMUSG00000006958	NonProperStrand	8	chr14	79502104	79503323	protein_coding	1300010F03Rik	exon	ENSMUSG00000058997	ProperStrand	29	1	-18.9546
chr4	133801679	133801695	lincRNA	E130218I03Rik	exon	ENSMUSG00000086322	NonProperStrand	43	chr16	23111763	23111813	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.4531
chr2	37502726	37502742	protein_coding	Strbp	utr5	ENSMUSG00000026915	ProperStrand	90	chr4	131399490	131399506	protein_coding	Mecr	exon	ENSMUSG00000028910	NonProperStrand	109	1	-11.2993
chr7	141131593	141131610	protein_coding	Adam12	intron	ENSMUSG00000054555	ProperStrand	18	chr5	121655052	121655126	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-6.0869
chr1	130194705	130194721	protein_coding	Lct	intron	ENSMUSG00000026354	NonProperStrand	9	chr12	88778750	88778768	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-10.3611
chr8	85689747	85689763	protein_coding	Tbc1d9	utr5	ENSMUSG00000031709	ProperStrand	66	chr10	23505259	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.1060
chr3	129336387	129336415	protein_coding	Elovl6	utr3	ENSMUSG00000041220	ProperStrand	59	chr4	131908236	131908332	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-4.2796
chrX	12708979	12709256	protein_coding	Usp9x	exon	ENSMUSG00000031010	ProperStrand	174	chr5	74489640	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	2	-3.4831
chr5	138631560	138631746	protein_coding	Cnpy4	exon	ENSMUSG00000036968	ProperStrand	6	chr18	33954842	33954922	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-8.1162
chr3	133130006	133130073	protein_coding	Tet2	exon	ENSMUSG00000040943	ProperStrand	192	chr9	64023229	64023319	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	3	-14.0554
chr11	23547354	23547387	protein_coding	Pex13	utr3	ENSMUSG00000020283	NonProperStrand	1	chr5	74489596	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-inf
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr1	33828651	33828669	protein_coding	Zfp451	intron	ENSMUSG00000042197	NonProperStrand	393	1	-2.4060
chr2	128841362	128841940	protein_coding	Zc3h6	exon	ENSMUSG00000042851	ProperStrand	8	chr4	131908816	131908896	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.7736
chr7	35983752	35983768	protein_coding	Slc7a10	exon	ENSMUSG00000030495	NonProperStrand	33	chr7	118219582	118219634	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-5.3243
chr3	8891275	8891320	protein_coding	Mrps28	intron	ENSMUSG00000040269	ProperStrand	1	chr2	158185530	158185635	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-inf
chr2	164257636	164257652	protein_coding	Sdc4	intron	ENSMUSG00000017009	ProperStrand	177	chr4	120212830	120212855	protein_coding	Ctps	utr3	ENSMUSG00000028633	ProperStrand	19	1	-13.4754
chr8	13416896	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr12	88778630	88778738	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	8	-9.3122
chr2	90235292	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	137066568	137096189	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	3	-1.7316
chr5	115983444	115983460	protein_coding	Pxn	intron	ENSMUSG00000029528	ProperStrand	171	chr1	162967508	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-1.6921
chr2	90795394	90795443	protein_coding	Celf1	intron	ENSMUSG00000005506	ProperStrand	61	chr16	23111373	23111463	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	5	-7.2493
chr11	116535951	116535982	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr1	15809648	15809720	protein_coding	Terf1	intron	ENSMUSG00000025925	ProperStrand	19	1	-8.2132
chr14	68400161	68400194	protein_coding	Dock5	exon	ENSMUSG00000044447	ProperStrand	12	chr17	24857740	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	3	-12.7264
chr4	57706987	57707003	protein_coding	Palm2	intron	ENSMUSG00000090053	NonProperStrand	187	chr1	162965980	162965999	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-1.6630
chr13	97425601	97425813	protein_coding	Hmgcr	exon	ENSMUSG00000021670	ProperStrand	56	chr5	130300525	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-6.8904
chr9	120038351	120039240	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	chr3	96405301	96405318	protein_coding	Lix1l	exon	ENSMUSG00000049288	NonProperStrand	1	1	-inf
chr13	9833552	9833651	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr13	23528224	23528284	tRNA	tRNA103-LysCTT	.	4603	ProperStrand	180	2	-5.0331
chr6	5334336	5334352	protein_coding	Asb4	intron	ENSMUSG00000042607	NonProperStrand	6	chr12	17552949	17552995	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-9.7905
chr16	17652060	17652150	protein_coding	Med15	utr3	ENSMUSG00000012114	ProperStrand	24	chr19	8800378	8800458	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-5.2834
chr2	91613185	91613203	protein_coding	Ambra1	exon	ENSMUSG00000040506	ProperStrand	65	chr7	106628072	106628214	snoRNA	ENSMUSG00000064966_Snord15b	.	ENSMUSG00000064966	ProperStrand	74	1	-12.7325
chr19	39005500	39005517	protein_coding	Hells	utr5	ENSMUSG00000025001	ProperStrand	23	chr7	52378419	52378480	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	1	-10.4411
chr18	67608610	67608631	protein_coding	Afg3l2	exon	ENSMUSG00000024527	ProperStrand	43	chr9	15119967	15120036	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	3	-18.0038
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr4	116827413	116827696	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	1	-5.8690
chr9	107810701	107813856	protein_coding	Mst1r	exon	ENSMUSG00000032584	NonProperStrand	30	chr16	23111705	23111723	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.0878
chr13	17972509	17972599	protein_coding	Rala	utr3	ENSMUSG00000008859	ProperStrand	15	chr9	40611534	40611554	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	1	-10.9517
chr12	92971129	92971163	protein_coding	Ston2	intron	ENSMUSG00000020961	ProperStrand	9	chr11	6428090	6428156	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-6.9084
chr7	28061791	28061807	protein_coding	Numbl	exon	ENSMUSG00000063160	NonProperStrand	9	chr13	77951990	77952007	protein_coding	Fam172a	intron	ENSMUSG00000064138	NonProperStrand	9	1	-19.9880
chr17	88383904	88387726	protein_coding	Msh6	exon	ENSMUSG00000005370	ProperStrand	150	chr7	29136549	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-1.9734
chr17	24665391	24665491	antisense	2610019E17Rik	.	ENSMUSG00000093565	ProperStrand	24	chr5	130300493	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-7.0445
chr8	74008400	74008417	protein_coding	Ano8	exon	ENSMUSG00000034863	NonProperStrand	171	chr5	115939527	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	5	-19.1518
chr4	116875158	116875248	snRNA	ENSMUSG00000070228_U5	.	ENSMUSG00000070228	ProperStrand	131	chr8	73419706	73419786	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-1.8096
chr10	7401069	7401086	protein_coding	Lats1	utr5	ENSMUSG00000040021	NonProperStrand	6	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-9.9170
chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	chr2	92852989	92853005	protein_coding	Prdm11	exon	ENSMUSG00000075028	NonProperStrand	6	1	-13.2610
chr7	13516154	13516172	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr5	108336363	108336490	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	4	-4.4870
chr5	112758435	112758451	protein_coding	Tfip11	exon	ENSMUSG00000029345	ProperStrand	111	chr5	130300456	130300475	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.5243
chr9	65044378	65044468	snRNA	ENSMUSG00000075763_U5	.	ENSMUSG00000075763	ProperStrand	216	chr8	32260344	32260424	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-2.3048
chr2	61649788	61649808	protein_coding	Tbr1	exon	ENSMUSG00000035033	ProperStrand	9	chr18	33954816	33954894	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-7.2497
chr11	104196783	104211842	protein_coding	1700081L11Rik	exon	ENSMUSG00000018412	ProperStrand	73	chr7	116663634	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-3.9074
chr2	26493435	26493517	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr8	26933610	26933693	protein_coding	Ash2l	exon	ENSMUSG00000031575	ProperStrand	113	1	-4.9590
chr11	60763420	60763510	protein_coding	Map2k3	exon	ENSMUSG00000018932	ProperStrand	3	chr14	48015583	48018111	protein_coding	Dlgap5	exon	ENSMUSG00000037544	ProperStrand	25	1	-inf
chr11	69037669	69037685	protein_coding	Gucy2e	exon	ENSMUSG00000020890	NonProperStrand	99	chr6	71832629	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-4.6409
chr11	75203937	75204037	protein_coding	Smyd4	exon	ENSMUSG00000018809	ProperStrand	11	chr16	23110919	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.6241
chr18	41356149	41356185	miRNA	Mir5097	dead	ENSMUSG00000093361	ProperStrand	221	chr1	133183957	133184058	protein_coding	Srgap2	utr3	ENSMUSG00000026425	ProperStrand	299	1	-7.4909
chr11	82577495	82577516	protein_coding	Cct6b	intron	ENSMUSG00000020698	ProperStrand	1	chr6	71832635	71832683	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-inf
chr3	106909227	106909243	protein_coding	Kcna2	utr3	ENSMUSG00000040724	ProperStrand	17	chr17	24857795	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.6133
chr17	56423671	56423739	protein_coding	Plin3	exon	ENSMUSG00000024197	ProperStrand	23	chr4	140273593	140273611	protein_coding	Rcc2	exon	ENSMUSG00000040945	ProperStrand	228	1	-12.5786
chr2	93873613	93873703	protein_coding	Hsd17b12	utr3	ENSMUSG00000027195	ProperStrand	28	chr11	97642982	97643062	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.8483
mmu-miR-2137	0	21	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	chr2	59012358	59012374	protein_coding	Pkp4	intron	ENSMUSG00000026991	NonProperStrand	11	1	-15.0087
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr2	118611946	118611962	protein_coding	Disp2	exon	ENSMUSG00000040035	NonProperStrand	204	1	-5.3822
chr9	110453867	110453967	protein_coding	Setd2	exon	ENSMUSG00000044791	ProperStrand	51	chr17	35087916	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-5.5173
chr3	88497777	88497799	protein_coding	2810403A07Rik	intron	ENSMUSG00000028060	ProperStrand	22	chr3	88497860	88497980	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-9.4817
chr8	113578433	113578498	protein_coding	Aars	exon	ENSMUSG00000031960	ProperStrand	355	chr18	35714144	35714234	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-0.7107
chr4	43505797	43505887	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr11	95250492	95251635	protein_coding	Slc35b1	exon	ENSMUSG00000020873	ProperStrand	2	1	-10.3311
chr17	33786010	33786053	protein_coding	Hnrnpm	intron	ENSMUSG00000059208	ProperStrand	56	chr19	8963030	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.3909
chr9	63868722	63868739	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	chr18	33954815	33954946	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	3	-1.1355
chr1	135500481	135500571	protein_coding	Snrpe	utr3	ENSMUSG00000090553	ProperStrand	1	chr16	23110906	23110986	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chrX	57935337	57935394	antisense	Gm14661	.	ENSMUSG00000067835	ProperStrand	9	chr15	79908929	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	4	-19.5546
chr7	52714453	52714553	protein_coding	Ftl1	exon	ENSMUSG00000050708	ProperStrand	807	chr5	38621913	38621951	protein_coding	Lyar	exon	ENSMUSG00000067367	ProperStrand	33	1	-9.3189
chr18	73693117	73693138	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr9	40612879	40612920	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	1	-2.0800
chr1	137347446	137347514	protein_coding	Nav1	exon	ENSMUSG00000009418	ProperStrand	38	chr9	15118330	15118379	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-4.3239
chr5	24100629	24100719	protein_coding-noncoding	Smarcd3	utr3	ENSMUSG00000028949	ProperStrand	1	chr5	24100899	24100979	protein_coding	Smarcd3	intron	ENSMUSG00000028949	ProperStrand	3	1	-inf
chr6	92747029	92747059	protein_coding	Adamts9	exon	ENSMUSG00000030022	ProperStrand	27	chr7	116663635	116663725	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-9.7552
chr11	78032681	78032785	protein_coding	Supt6h	exon	ENSMUSG00000002052	ProperStrand	119	chr17	35087895	35087916	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-3.8932
chr9	45670891	45670980	protein_coding	Rnf214	intron	ENSMUSG00000042790	ProperStrand	24	chr16	23111385	23111465	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.7195
chr10	34002680	34002698	protein_coding	Tspyl1	exon	ENSMUSG00000047514	ProperStrand	22	chr7	29136525	29136570	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.1896
chrX	131342878	131342900	protein_coding	Armcx2	utr5	ENSMUSG00000033436	ProperStrand	12	chr18	45718263	45718280	protein_coding	Kcnn2	intron	ENSMUSG00000054477	ProperStrand	26	1	-17.9842
chr1	133064783	133064812	protein_coding	Eif2d	exon	ENSMUSG00000026427	ProperStrand	12	chr11	97642952	97643007	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-5.5085
chr14	70985502	70985547	protein_coding	Fam160b2	exon	ENSMUSG00000022095	ProperStrand	24	chr1	90123798	90124639	protein_coding	Heatr7b1	utr5	ENSMUSG00000079429	ProperStrand	147	1	-13.3724
chr3	34537414	34537504	non_coding	Sox2ot	.	ENSMUSG00000090828	ProperStrand	25	chr2	26494720	26494800	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-7.9096
chr2	144091751	144091841	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	ProperStrand	549	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	3	-6.4163
chr8	64017614	64028378	protein_coding	Palld	exon	ENSMUSG00000058056	NonProperStrand	125	chr7	117166723	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-3.4344
chr16	87427864	87427939	protein_coding	Ltn1	exon	ENSMUSG00000052299	ProperStrand	49	chr19	8799829	8799887	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	4	-16.5128
chr8	12430538	12430554	protein_coding	Gm5607	exon	ENSMUSG00000047935	NonProperStrand	7	chr8	74232927	74232959	protein_coding	Fcho1	utr3	ENSMUSG00000070000	ProperStrand	38	1	-18.6519
chr9	44598073	44598094	protein_coding	Ift46	intron	ENSMUSG00000002031	NonProperStrand	28	chr10	110918593	110918690	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	4	-15.4697
chr14	106292606	106292706	protein_coding	Spry2	exon	ENSMUSG00000022114	ProperStrand	22	chr4	131908689	131908722	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.8292
chr1	152296870	152296886	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	chr9	108209035	108209055	protein_coding	Rhoa	intron	ENSMUSG00000007815	ProperStrand	45	1	-9.4864
chr5	44477226	44477337	protein_coding	Prom1	intron	ENSMUSG00000029086	ProperStrand	12	chr7	29136608	29136631	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-12.8866
chr12	13242877	13242912	protein_coding	Ddx1	exon	ENSMUSG00000037149	ProperStrand	47	chr8	32260335	32260425	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-5.1019
chr1	133832226	133832311	protein_coding	Nucks1	utr3	ENSMUSG00000026434	ProperStrand	59	chr8	73419657	73419729	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.1606
chr12	110888877	110888948	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr9	103401280	103401296	protein_coding	Tmem108	exon	ENSMUSG00000042757	NonProperStrand	323	1	-5.3407
chr9	95524994	95525035	snoRNA	ENSMUSG00000065346_SNORA4	.	ENSMUSG00000065346	ProperStrand	142	chr4	131908314	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-2.6083
chr9	45237700	45237720	protein_coding	Dscaml1	intron	ENSMUSG00000032087	ProperStrand	23	chr4	22414139	22414155	protein_coding	Pou3f2	exon	ENSMUSG00000052621	NonProperStrand	90	1	-14.4338
chr1	102076754	102076798	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	chr11	77995188	77995255	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	4	-9.0842
chr10	23505559	23505626	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	chr3	95980306	95980411	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	3	-4.5407
chr7	133940388	133940873	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	chr15	5068412	5068480	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-1.5745
chr5	123907404	123907509	protein_coding	Mlxip	utr3	ENSMUSG00000038342	ProperStrand	21	chr5	130300511	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.4412
chr16	91228605	91228621	protein_coding	Olig2	utr3	ENSMUSG00000039830	ProperStrand	3	chr19	8800377	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-9.7434
chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	chr2	22444219	22444238	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-3.7738
chr18	42683804	42683832	protein_coding	Tcerg1	exon	ENSMUSG00000024498	ProperStrand	210	chr15	101937940	101937956	protein_coding	Tenc1	exon	ENSMUSG00000037003	NonProperStrand	5	1	-15.9700
chr17	32453268	32453285	protein_coding	Akap8	exon	ENSMUSG00000024045	ProperStrand	339	chr7	144651196	144653033	protein_coding	Glrx3	exon	ENSMUSG00000031068	ProperStrand	35	1	-10.9313
chr5	110792290	110792359	protein_coding	Fbrsl1	exon	ENSMUSG00000043323	ProperStrand	131	chr9	120038613	120038670	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	3	-4.8995
chr13	18955949	18958041	protein_coding	Vps41	exon	ENSMUSG00000041236	ProperStrand	31	chr7	29136525	29136598	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.5406
chrX	138159145	138159161	protein_coding	Irs4	exon	ENSMUSG00000054667	NonProperStrand	98	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-6.7644
chr3	87718912	87719012	protein_coding	Hdgf	utr3	ENSMUSG00000004897	ProperStrand	117	chr13	51743639	51743703	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-5.5457
chr17	80452971	80461002	protein_coding	Hnrpll	exon	ENSMUSG00000024095	NonProperStrand	4	chr4	131908236	131908355	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-16.6323
chr12	4134441	4134531	protein_coding	Adcy3	exon	ENSMUSG00000020654	ProperStrand	33	chr18	35716789	35716869	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.2115
chr4	23044257	23044305	LINE	Lx	L1	chr4Lx23044220	NonProperStrand	2	chr16	23110970	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-inf
chrX	11635848	11635865	protein_coding	Bcor	exon	ENSMUSG00000040363	NonProperStrand	293	chr12	88778722	88778768	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-3.4565
chr4	132752347	132752416	protein_coding	Wasf2	utr3	ENSMUSG00000028868	ProperStrand	56	chr4	131908379	131908409	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.5191
chr13	29889383	29889399	protein_coding	Cdkal1	intron	ENSMUSG00000006191	ProperStrand	43	chr4	131908244	131908296	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.9253
chr6	72180855	72180872	protein_coding	Atoh8	intron	ENSMUSG00000037621	NonProperStrand	61	chr2	130103751	130103775	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-8.4384
chr9	65435747	65435765	protein_coding	Pif1	exon	ENSMUSG00000041064	NonProperStrand	18	chr2	130102030	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-7.7579
chr16	35801655	35801671	protein_coding	Hspbap1	exon	ENSMUSG00000022849	ProperStrand	48	chr1	88252837	88252901	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-7.0837
chr7	25774677	25774851	protein_coding	Atp1a3	exon	ENSMUSG00000040907	ProperStrand	66	chrX	34622917	34622997	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-3.0000
chr17	35646093	35646353	protein_coding	Pou5f1	exon	ENSMUSG00000024406	ProperStrand	104	chr8	25920545	25921169	protein_coding	Adam5	exon	ENSMUSG00000031554	ProperStrand	49	1	-12.6194
chr12	106269430	106269520	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	chr15	71624643	71624672	snoRNA	ENSMUSG00000088895_SNORA81	.	ENSMUSG00000088895	ProperStrand	348	1	-1.1889
chr2	158677493	158682851	protein_coding	Dhx35	exon	ENSMUSG00000027655	ProperStrand	37	chr9	15119714	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.4975
chr14	21513798	21513876	protein_coding	Sec24c	utr3	ENSMUSG00000039367	ProperStrand	60	chr19	8963027	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-4.0582
chr2	102140996	102141016	protein_coding	Trim44	utr3	ENSMUSG00000027189	ProperStrand	26	chr9	57385425	57385441	protein_coding	2310046O06Rik	utr5	ENSMUSG00000032305	ProperStrand	135	1	-13.3784
chr13	108514848	108514866	protein_coding	Zswim6	utr3	ENSMUSG00000032846	NonProperStrand	19	chr5	108334195	108336485	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	3	-16.1748
chr3	108188076	108188166	protein_coding	Psrc1	exon	ENSMUSG00000068744	ProperStrand	38	chr5	74489587	74489667	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-4.6454
chr2	37502726	37502742	protein_coding	Strbp	utr5	ENSMUSG00000026915	ProperStrand	90	chr4	131908816	131908902	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.7265
chr17	21095955	21096373	protein_coding	Ppp2r1a	exon	ENSMUSG00000007564	ProperStrand	57	chr1	89681264	89681352	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	5	-19.9429
chr9	15120957	15121057	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	chr2	180364196	180364246	protein_coding	Tcfl5	intron	ENSMUSG00000038932	ProperStrand	11	5	-19.4638
chr18	46893735	46893851	protein_coding	Atg12	utr3	ENSMUSG00000032905	ProperStrand	4	chr7	116663730	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-7.9103
chr4	133686555	133686589	protein_coding	Ccdc21	utr3	ENSMUSG00000037443	ProperStrand	112	chr4	122968671	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-5.0608
chr1	89001494	89001511	SINE	ID4_	ID	chr1ID4_89001463	ProperStrand	8	chr2	32277004	32277035	protein_coding	Slc25a25	exon	ENSMUSG00000026819	ProperStrand	7	1	-19.5782
chr11	115352188	115352479	protein_coding	Nt5c	exon	ENSMUSG00000020736	ProperStrand	6	chr4	58083061	58083077	protein_coding	Svep1	exon	ENSMUSG00000028369	ProperStrand	54	1	-18.0957
chr7	80547651	80547667	protein_coding	Rgma	intron	ENSMUSG00000070509	ProperStrand	46	chr18	73693113	73693137	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-6.0463
chr2	25563070	25563086	antisense	A230005M16Rik	.	ENSMUSG00000087612	ProperStrand	103	chr11	62416951	62416976	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-4.9890
chr9	66352682	66356000	protein_coding	Herc1	exon	ENSMUSG00000038664	ProperStrand	81	chr16	23111702	23111775	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.4475
chr2	179925417	179925479	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr11	58809803	58810353	protein_coding	Obscn	exon	ENSMUSG00000061462	ProperStrand	81	1	-9.0943
chr13	23242742	23242759	LTR	MT2A	ERVL	chr13MT2A23242718	ProperStrand	5	chr11	77995191	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-11.3184
chr15	36532669	36532724	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr2	41199972	41199989	protein_coding	Lrp1b	exon	ENSMUSG00000049252	ProperStrand	376	2	-7.1573
chr14	35052060	35052083	protein_coding	Fam35a	exon	ENSMUSG00000041471	ProperStrand	11	chr9	56937234	56937330	protein_coding	Sin3a	exon	ENSMUSG00000042557	ProperStrand	108	4	-20.0953
chr10	74797032	74797049	protein_coding	Adora2a	utr3	ENSMUSG00000020178	NonProperStrand	2	chr18	33954815	33954872	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-10.8123
chr4	127952129	127952147	protein_coding	Csmd2	intron	ENSMUSG00000028804	NonProperStrand	34	chr3	123210906	123210983	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-5.2759
chrX	20497688	20497713	protein_coding	Syn1	exon	ENSMUSG00000037217	ProperStrand	9	chr18	35714218	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-7.1819
chr2	130103750	130103826	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	chr16	23110828	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	31	-1.4811
chr8	125413941	125414011	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	chr18	35716788	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-0.6950
chr3	53408865	53408882	protein_coding	Frem2	intron	ENSMUSG00000037016	NonProperStrand	11	chr5	108334231	108334331	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	NonProperStrand	17	1	-19.6539
chr7	118223764	118224430	protein_coding	Eif4g2	exon	ENSMUSG00000005610	ProperStrand	134	chr7	116663653	116663733	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.2588
chr5	136333034	136333053	protein_coding	Srrm3	utr3	ENSMUSG00000039860	ProperStrand	41	chr11	94419996	94420012	protein_coding	Acsf2	exon	ENSMUSG00000076435	NonProperStrand	4	1	-21.8874
chr2	118355668	118355701	protein_coding	Bmf	utr3	ENSMUSG00000040093	ProperStrand	53	chr4	131908236	131908286	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-2.9858
chr4	116956602	116956646	protein_coding	Rnf220	intron	ENSMUSG00000028677	ProperStrand	131	chr5	140857296	140857313	protein_coding	Snx8	intron	ENSMUSG00000029560	ProperStrand	106	1	-10.6025
chr7	97357026	97357066	protein_coding	Picalm	utr3	ENSMUSG00000039361	ProperStrand	23	chr4	122968589	122968679	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	6	-19.4835
chr19	44188368	44188390	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr4	42993732	42995442	protein_coding	Vcp	exon	ENSMUSG00000028452	ProperStrand	108	1	-6.6276
chr3	153575089	153575105	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	chr7	54102704	54102720	protein_coding	Ldha	exon	ENSMUSG00000063229	NonProperStrand	8	1	-12.6297
chr7	123301373	123301452	protein_coding	Plekha7	exon	ENSMUSG00000045659	ProperStrand	66	chr17	28215419	28215436	protein_coding	Tcp11	intron	ENSMUSG00000062859	NonProperStrand	11	1	-16.5467
chr15	84916250	84916312	protein_coding	Smc1b	intron	ENSMUSG00000022432	ProperStrand	11	chr2	31924012	31924028	protein_coding	Fam78a	utr3	ENSMUSG00000050592	NonProperStrand	340	1	-13.3038
chr19	53446160	53446190	protein_coding	Mxi1	exon	ENSMUSG00000025025	ProperStrand	51	chr2	24825186	24827046	protein_coding	Wdr85	exon	ENSMUSG00000026975	ProperStrand	323	1	-10.2675
chrX	136259728	136259745	protein_coding	Tbc1d8b	exon	ENSMUSG00000042473	ProperStrand	2	chr9	120039533	120039604	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-10.6072
chr6	115757992	115758125	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr17	35087895	35087964	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	9	-2.7760
chr13	58229116	58229135	protein_coding	Hnrnpa0	exon	ENSMUSG00000007836	ProperStrand	110	chr19	8798764	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-3.6550
chr5	145614465	145614492	protein_coding	Trrap	exon	ENSMUSG00000045482	ProperStrand	399	chr1	162966007	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	3	-2.3807
chr13	23855648	23855744	protein_coding	Hist1h1a	exon	ENSMUSG00000049539	ProperStrand	34	chr7	116663728	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	7	-19.4906
chr17	47604805	47604821	protein_coding	AI661453	exon	ENSMUSG00000034382	NonProperStrand	38	chr12	17552962	17553031	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-5.9844
chr7	35435141	35435773	protein_coding	Kctd15	exon	ENSMUSG00000030499	ProperStrand	6	chr8	11227080	11227117	protein_coding	Col4a1	exon	ENSMUSG00000031502	ProperStrand	64	1	-17.5664
chr19	7002905	7002921	protein_coding	Kcnk4	intron	ENSMUSG00000024957	NonProperStrand	11	chr6	33922477	33922525	protein_coding	Exoc4	utr3	ENSMUSG00000029763	ProperStrand	120	1	-15.3958
chr16	90476461	90476477	protein_coding	Hunk	intron	ENSMUSG00000053414	NonProperStrand	4	chr14	76247788	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-9.7427
chr4	21606097	21606114	protein_coding	Prdm13	exon	ENSMUSG00000040478	ProperStrand	51	chr1	89673571	89673661	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	2	-6.0589
chr1	190667727	190667743	protein_coding	Ush2a	intron	ENSMUSG00000026609	NonProperStrand	60	chr1	162967113	162967131	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	1	-8.6795
chr7	12656794	12656884	LINE	L1Md_A	L1	chr7L1Md_A12655218	ProperStrand	1	chr7	54443118	54443198	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-inf
chr17	31316691	31316708	protein_coding	Tmprss3	utr3	ENSMUSG00000024034	NonProperStrand	2	chr3	14588600	14588618	protein_coding	E2f5	intron	ENSMUSG00000027552	NonProperStrand	17	1	-inf
chr9	64954192	64954209	protein_coding	Igdcc4	intron	ENSMUSG00000032816	ProperStrand	29	chr11	6428108	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.5563
chr2	179931827	179932088	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr7	4763813	4763830	protein_coding	Ube2s	utr5	ENSMUSG00000060860	ProperStrand	62	1	-9.6305
chr19	47205280	47205296	protein_coding	Pdcd11	exon	ENSMUSG00000025047	ProperStrand	137	chr7	52382237	52382315	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-6.6422
chr15	37901553	37970581	protein_coding	Ubr5	exon	ENSMUSG00000037487	ProperStrand	258	chr11	69483134	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	9	-9.6760
chr17	50425470	50425534	protein_coding	Dazl	intron	ENSMUSG00000010592	ProperStrand	10	chr5	144947047	144947064	protein_coding	Lmtk2	utr3	ENSMUSG00000038970	NonProperStrand	10	1	-20.3924
chrX	47917619	47917663	lincRNA	6720401G13Rik	intron	ENSMUSG00000085396	ProperStrand	34	chr4	131908233	131908286	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.3115
chr9	15112199	15113002	protein_coding	Taf1d	exon	ENSMUSG00000031939	ProperStrand	363	chr2	166890507	166890559	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	17	-19.4059
chr9	119395878	119395894	protein_coding	Scn5a	exon	ENSMUSG00000032511	ProperStrand	19	chr18	35716684	35716761	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-10.4198
chr2	112179621	112201112	protein_coding	Slc12a6	utr3	ENSMUSG00000027130	ProperStrand	35	chr16	23110909	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.7567
chr4	151704217	151706420	protein_coding	Rpl22	exon	ENSMUSG00000028936	ProperStrand	112	chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	1	-8.2399
chr11	52190198	52197363	protein_coding	Vdac1	exon	ENSMUSG00000020402	ProperStrand	107	chr9	121662196	121663364	protein_coding	Nktr	exon	ENSMUSG00000032525	ProperStrand	41	1	-12.9233
chr14	15572352	15572370	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr1	93103319	93103336	protein_coding	Ramp1	utr3	ENSMUSG00000034353	NonProperStrand	4	1	-16.8880
chrX	101157787	101157887	protein_coding	Rlim	utr3	ENSMUSG00000056537	ProperStrand	38	chr15	79913288	79913329	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.4538
chr5	117737466	117737533	protein_coding	Pebp1	exon	ENSMUSG00000032959	ProperStrand	54	chrX	34622930	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-3.3626
chr11	23170840	23170900	protein_coding	Xpo1	intron	ENSMUSG00000020290	ProperStrand	123	chr5	130300448	130300538	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.3763
chr17	56857234	56857274	protein_coding	Ndufa11	utr5	ENSMUSG00000002379	ProperStrand	17	chr10	84102589	84109579	protein_coding	Polr3b	exon	ENSMUSG00000034453	ProperStrand	41	1	-16.6806
chr15	6792809	6792825	protein_coding	Osmr	exon	ENSMUSG00000022146	ProperStrand	6	chr4	151488083	151488140	protein_coding	Plekhg5	exon	ENSMUSG00000039713	ProperStrand	33	1	-18.5509
chr10	40467680	40467760	protein_coding	9030224M15Rik	intron	ENSMUSG00000045555	NonProperStrand	4	chr10	40464410	40464500	protein_coding	9030224M15Rik	intron	ENSMUSG00000045555	ProperStrand	2	1	-inf
chr15	102135570	102136168	protein_coding	Espl1	exon	ENSMUSG00000058290	ProperStrand	172	chr16	23111796	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-2.0097
chr1	181320398	181320424	protein_coding	Smyd3	intron	ENSMUSG00000055067	NonProperStrand	190	chr11	51551275	51551335	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	1	-5.4265
chr8	75092799	75093880	protein_coding	9130011J15Rik	exon	ENSMUSG00000044600	ProperStrand	9	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-7.0004
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chrX	23377876	23378192	protein_coding	Wdr44	exon	ENSMUSG00000036769	ProperStrand	18	1	-11.1554
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr11	55296191	55296274	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-1.6421
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	25702680	25702696	protein_coding	Sohlh1	exon	ENSMUSG00000059625	ProperStrand	22	1	-6.4314
chr4	43505709	43505799	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr9	35278670	35278689	protein_coding	Cdon	exon	ENSMUSG00000038119	ProperStrand	33	1	-4.1792
chrX	166428150	166428216	protein_coding	Mid1	utr3	ENSMUSG00000035299	ProperStrand	209	chr2	153050783	153050799	protein_coding	Tspyl3	exon	ENSMUSG00000074671	ProperStrand	228	1	-8.1399
chr10	62044948	62045083	protein_coding	Ddx21	utr3	ENSMUSG00000020075	ProperStrand	137	chr14	72959099	72959116	protein_coding	Fndc3a	exon	ENSMUSG00000033487	NonProperStrand	1	1	-inf
chr11	115940380	115940505	protein_coding	Wbp2	utr3	ENSMUSG00000034341	ProperStrand	39	chr4	116827119	116827146	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-7.9010
chr16	11144153	11144231	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr7	52382234	52382291	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	NonProperStrand	2	1	-18.2639
chr14	39787889	39787908	protein_coding	Nrg3	intron	ENSMUSG00000041014	NonProperStrand	9	chr19	8963083	8963204	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.8692
chr8	86657375	86657392	protein_coding	Cc2d1a	exon	ENSMUSG00000036686	ProperStrand	18	chr14	51684484	51684503	tRNA	tRNA705-ProAGG	.	1847123	ProperStrand	1	1	-inf
chr13	9833551	9833617	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr9	64023228	64023288	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	1	-0.8780
chr9	85581049	85581123	protein_coding	Ibtk	utr3	ENSMUSG00000035941	ProperStrand	14	chr7	117189940	117190030	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-6.1508
chr2	25227976	25227995	protein_coding	2010317E24Rik	exon	ENSMUSG00000026955	NonProperStrand	1	chr16	23110828	23110882	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr9	78023109	78023150	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr1	59761105	59761152	snoRNA	ENSMUSG00000089512_SNORD11	.	ENSMUSG00000089512	ProperStrand	43	2	-10.5788
chr5	139710643	139710733	protein_coding	Sun1	exon	ENSMUSG00000036817	ProperStrand	108	chr4	131866169	131866249	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-2.6101
chr18	34532929	34533001	protein_coding	Reep5	utr5	ENSMUSG00000005873	ProperStrand	19	chr17	57165084	57166298	protein_coding	Khsrp	exon	ENSMUSG00000007670	ProperStrand	353	1	-12.0958
chr17	75045929	75045976	protein_coding	Birc6	exon	ENSMUSG00000024073	ProperStrand	110	chr1	161270485	161270554	snoRNA	ENSMUSG00000089536_Scarna3a	.	ENSMUSG00000089536	ProperStrand	247	1	-9.2606
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr9	15118325	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	6	-4.3472
chr2	90235320	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr13	95856366	95856384	protein_coding	Pde8b	intron	ENSMUSG00000021684	ProperStrand	43	1	-5.1055
chr15	102349652	102349707	protein_coding	Tarbp2	exon	ENSMUSG00000023051	ProperStrand	2	chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	1	-17.3529
chr16	63158264	63158281	LINE	L2	L2	chr16L263158147	NonProperStrand	17	chr7	29136525	29136632	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.6910
chr1	75251707	75251734	protein_coding	Ptprn	exon	ENSMUSG00000026204	ProperStrand	1	chr5	130300460	130300550	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-inf
chr11	95541062	95541131	protein_coding	Phb	exon	ENSMUSG00000038845	ProperStrand	126	chr14	33005143	33005233	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-2.6487
chr13	9833550	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr1	162968442	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	6	-1.6271
chr5	65952377	65952395	protein_coding	Ube2k	intron	ENSMUSG00000029203	ProperStrand	289	chr17	35087892	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-2.3144
chr19	45225769	45225787	protein_coding	Tlx1	exon	ENSMUSG00000025215	NonProperStrand	12	chr19	8963110	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.2811
chr10	23505415	23505471	protein_coding	Rps12	exon	ENSMUSG00000061983	ProperStrand	309	chr15	98350146	98350203	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-1.8370
chr1	121441272	121441327	SINE	B4	B4	chr1B4121441166	ProperStrand	1	chrX	101273213	101273229	protein_coding	C77370	utr3	ENSMUSG00000046449	NonProperStrand	4	1	-inf
chr5	20049432	20056028	protein_coding	Magi2	exon	ENSMUSG00000040003	NonProperStrand	24	chr10	23505152	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-4.7395
chr6	85417639	85417679	protein_coding	Cct7	exon	ENSMUSG00000030007	ProperStrand	173	chr7	134671396	134671486	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	3	-13.3325
chr3	68872254	68930362	protein_coding	Kpna4	utr3	ENSMUSG00000027782	ProperStrand	21	chr16	23110827	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.9373
chr1	162893630	162893682	protein_coding	Rc3h1	exon	ENSMUSG00000040423	ProperStrand	13	chr12	55835612	55835702	snRNA	ENSMUSG00000075960_U1	.	ENSMUSG00000075960	ProperStrand	210	1	-13.9226
chr8	109172949	109173029	protein_coding	Cdh1	exon	ENSMUSG00000000303	ProperStrand	283	chr3	116365405	116365495	protein_coding	Hiat1	utr5	ENSMUSG00000089911	ProperStrand	20	5	-19.5237
chr11	102297144	102297234	protein_coding	Grn	exon	ENSMUSG00000034708	ProperStrand	43	chr3	123210892	123210972	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.6276
chr17	53623235	53623252	protein_coding	Rab5a	utr5	ENSMUSG00000017831	ProperStrand	44	chr11	98878341	98878368	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-6.9000
chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	chr14	47004260	47004359	protein_coding	Bmp4	exon	ENSMUSG00000021835	ProperStrand	5	1	-15.6375
chr6	119305512	119305533	protein_coding	Adipor2	utr3	ENSMUSG00000030168	ProperStrand	79	chr16	36928366	36928733	protein_coding	Golgb1	exon	ENSMUSG00000034243	ProperStrand	92	1	-11.9022
chr13	47180724	47180756	protein_coding	Dek	utr3	ENSMUSG00000021377	ProperStrand	36	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	12	-inf
chr1	94938167	94938267	protein_coding	Kif1a	exon	ENSMUSG00000014602	ProperStrand	18	chr11	55296262	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-8.5975
chr15	99685335	99685387	protein_coding	Lima1	intron	ENSMUSG00000023022	ProperStrand	159	chr11	62416994	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-4.1609
chr7	87883952	87884763	protein_coding	Iqgap1	exon	ENSMUSG00000030536	ProperStrand	43	chr1	155287316	155287354	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	1	-9.6492
chr17	3080770	3080857	pseudogene	Pisd-ps2	.	ENSMUSG00000023795	ProperStrand	2	chr19	17900101	17900117	snoRNA	ENSMUSG00000089540_snoU13	.	ENSMUSG00000089540	ProperStrand	99	1	-19.9021
chr2	179932145	179932168	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr19	8800412	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-0.7320
chr8	83524971	83529234	protein_coding	Usp38	exon	ENSMUSG00000038250	ProperStrand	26	chr16	18227652	18227669	protein_coding	Zdhhc8	intron	ENSMUSG00000060166	NonProperStrand	9	1	-18.6272
chr4	133163072	133163135	protein_coding	Zdhhc18	utr3	ENSMUSG00000037553	ProperStrand	51	chr3	123210854	123210877	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-6.2691
chr3	107476399	107476961	protein_coding	Ahcyl1	exon	ENSMUSG00000027893	ProperStrand	81	chr19	11015616	11015632	protein_coding	Gpr44	exon	ENSMUSG00000034117	NonProperStrand	118	1	-11.3520
chr7	29348066	29348082	protein_coding	Pak4	exon	ENSMUSG00000030602	ProperStrand	18	chr16	23111416	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-5.6208
chr15	63969559	63969575	protein_coding	Asap1	exon	ENSMUSG00000022377	NonProperStrand	47	chr1	162966812	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-6.7428
chr9	106332344	106333423	protein_coding	Rpl29	exon	ENSMUSG00000048758	ProperStrand	45	chr15	98350157	98350237	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-5.3188
chr7	133617695	133617734	protein_coding	Sh2b1	intron	ENSMUSG00000030733	ProperStrand	17	chr14	124243064	124243085	protein_coding	Itgbl1	exon	ENSMUSG00000032925	ProperStrand	159	1	-13.9209
chr17	56208060	56208426	protein_coding	Ubxn6	exon	ENSMUSG00000019578	ProperStrand	10	chr4	131908360	131908440	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.5892
chr2	130103751	130103822	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	chr18	35714189	35714291	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	5	-2.3257
chr9	88419023	88419041	SINE	B4	B4	chr9B488418988	ProperStrand	75	chr5	151028210	151028282	protein_coding	Fry	intron	ENSMUSG00000056602	ProperStrand	24	1	-14.7170
chr19	38893592	38893608	protein_coding	Noc3l	utr5	ENSMUSG00000024999	NonProperStrand	149	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-7.1136
chr9	64143850	64143877	protein_coding	Tipin	intron	ENSMUSG00000032397	ProperStrand	32	chr8	72341708	72341808	protein_coding	Gmip	exon	ENSMUSG00000036246	ProperStrand	102	1	-13.5168
chr11	102294588	102294610	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr16	23111372	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	9	-0.7139
chr8	12616126	12621803	protein_coding	Tubgcp3	exon	ENSMUSG00000000759	ProperStrand	16	chr4	131908802	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.4136
chr3	96023872	96023962	protein_coding	Hist2h2ab	exon	ENSMUSG00000063689	ProperStrand	2	chr9	15119634	15119714	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-9.8289
chr15	83794814	83794830	protein_coding	Efcab6	intron	ENSMUSG00000022441	ProperStrand	60	chr9	102810583	102810600	protein_coding	Ryk	utr3	ENSMUSG00000032547	ProperStrand	25	1	-15.0874
chr4	137068160	137091071	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	chr19	8798740	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	2	-1.2848
chr19	44369614	44372543	protein_coding	Scd2	exon	ENSMUSG00000025203	ProperStrand	219	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-2.7882
chrX	20276187	20276258	protein_coding	Cdk16	utr3	ENSMUSG00000031065	ProperStrand	30	chr7	16534823	16534839	protein_coding	Ehd2	utr3	ENSMUSG00000074364	NonProperStrand	197	1	-12.3300
chr8	71338204	71343226	protein_coding	Ints10	exon	ENSMUSG00000031864	ProperStrand	28	chr15	79913288	79913319	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-5.0460
chr4	133521422	133521899	protein_coding	Hmgn2	utr3	ENSMUSG00000003038	ProperStrand	20	chr3	88715213	88715230	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-9.4486
chr3	88212813	88212913	protein_coding	Pmf1	intron	ENSMUSG00000028066	ProperStrand	5	chr19	8799845	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-10.0468
chr17	23955820	23955836	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	chr9	110544350	110544366	protein_coding	Nbeal2	exon	ENSMUSG00000056724	ProperStrand	161	1	-9.4950
chr11	97889177	97889683	protein_coding	Rpl19	exon	ENSMUSG00000017404	ProperStrand	120	chr4	131865411	131865491	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-2.7414
chr16	39924696	39924718	LINE	Lx4B	L1	chr16Lx4B39922872	ProperStrand	1	chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	1	-inf
chr4	82158755	82158771	protein_coding	Nfib	intron	ENSMUSG00000008575	ProperStrand	50	chr16	23110455	23110517	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.7776
chr19	38147100	38147165	protein_coding	Cep55	intron	ENSMUSG00000024989	ProperStrand	29	chr4	131908236	131908297	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.5844
chrX	48855296	48855330	protein_coding	Hs6st2	intron	ENSMUSG00000062184	ProperStrand	7	chr16	23110973	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.4785
chr4	115484059	115484089	protein_coding	Atpaf1	utr3	ENSMUSG00000028710	ProperStrand	202	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-3.7400
chr5	143733831	143733877	protein_coding	Fscn1	utr3	ENSMUSG00000029581	ProperStrand	200	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-4.6311
chr2	90235298	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr13	55234303	55234319	protein_coding	Zfp346	utr3	ENSMUSG00000021481	ProperStrand	22	1	-6.4314
chr17	53071061	53071078	LINE	L1_Mus4	L1	chr17L1_Mus453067946	NonProperStrand	21	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.2774
chr16	93832396	93832412	protein_coding	Morc3	utr5	ENSMUSG00000039456	NonProperStrand	33	chr11	69481391	69481432	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-4.3164
chr6	87769189	87769558	protein_coding	Isy1	exon	ENSMUSG00000030056	ProperStrand	172	chr11	106362304	106362378	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-3.8220
chr2	5190161	5190180	LTR	RLTR9A	ERVK	chr2RLTR9A5190151	ProperStrand	1	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-inf
chr2	130101972	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	chr5	147646449	147646477	snoRNA	ENSMUSG00000077185_SNORD102	.	ENSMUSG00000077185	ProperStrand	142	1	-3.7148
mmu-miR-96-5p	0	22	miRNA	mmu-miR-96-5p	.	mmu-miR-96-5p	ProperStrand	1	chr16	15966734	15966857	protein_coding	2310008H04Rik	exon	ENSMUSG00000041974	ProperStrand	30	1	-inf
chr5	129528946	129529008	protein_coding	Ran	utr3	ENSMUSG00000029430	ProperStrand	82	chr11	68886977	68887033	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	3	-8.8248
chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	chr19	8799021	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	2	-7.1195
chr13	19684241	19684257	protein_coding	Epdr1	utr3	ENSMUSG00000002808	ProperStrand	46	chr11	68886928	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	2	-7.7255
chr1	74451522	74451612	SINE	B1_Mm	Alu	chr1B1_Mm74451512	NonProperStrand	1	chr1	74452158	74452238	SINE	B1_Mus1	Alu	chr1B1_Mus174452146	NonProperStrand	1	1	-inf
chr4	43505711	43505801	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	NonProperStrand	174	chr7	148444150	148444166	protein_coding	Phrf1	exon	ENSMUSG00000038611	ProperStrand	86	1	-10.4536
chr6	56810695	56810785	protein_coding	Fkbp9	exon	ENSMUSG00000029781	ProperStrand	39	chr11	68886963	68887043	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-4.9706
chr19	47738046	47738297	protein_coding	Col17a1	exon	ENSMUSG00000025064	ProperStrand	10	chr9	15119631	15119684	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-6.0614
chr11	120592138	120592154	protein_coding	Cbr2	exon	ENSMUSG00000025150	ProperStrand	1	chr15	79908951	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-inf
chr17	53763417	53763488	protein_coding	Kat2b	intron	ENSMUSG00000000708	ProperStrand	26	chr7	148634769	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-5.6034
chr10	80641721	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	chr11	6520321	6520421	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	1	-2.2639
chr2	103612908	103612960	protein_coding	Caprin1	exon	ENSMUSG00000027184	ProperStrand	145	chr2	158182156	158182202	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	3	-8.3477
chr9	64981511	64981530	protein_coding	Igdcc4	exon	ENSMUSG00000032816	NonProperStrand	36	chr15	82980100	82980192	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	2	-13.0324
chr2	30192244	30192473	protein_coding	Nup188	exon	ENSMUSG00000052533	ProperStrand	96	chr11	69483189	69483279	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.6891
chr1	82441357	82441396	protein_coding	Rhbdd1	utr3	ENSMUSG00000026142	ProperStrand	22	chr3	89535582	89535656	protein_coding	Adar	intron	ENSMUSG00000027951	ProperStrand	52	3	-19.3032
chr2	168094191	168094207	protein_coding	Kcng1	exon	ENSMUSG00000074575	ProperStrand	4	chr2	18508668	18508701	tRNA	tRNA1947-AsnGTT	.	1741980	ProperStrand	179	1	-16.7506
chrX	98484746	98485368	protein_coding	Med12	exon	ENSMUSG00000079487	ProperStrand	79	chr9	64022893	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	2	-11.9788
chr4	9380606	9380624	protein_coding	Asph	intron	ENSMUSG00000028207	NonProperStrand	6	chr19	8799593	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-11.5077
chr6	84961355	84961413	protein_coding	Exoc6b	exon	ENSMUSG00000033769	ProperStrand	23	chr9	55643899	55643933	protein_coding	Scaper	intron	ENSMUSG00000034007	ProperStrand	19	4	-19.4675
chr8	109182098	109182203	protein_coding	Cdh1	exon	ENSMUSG00000000303	NonProperStrand	3	chr8	97078908	97079413	protein_coding	Cpne2	exon	ENSMUSG00000034361	ProperStrand	4	1	-inf
chr16	37882822	37882866	protein_coding	Lrrc58	utr3	ENSMUSG00000034158	ProperStrand	23	chr7	116664811	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-4.3088
chr3	109144638	109144728	protein_coding	Vav3	intron	ENSMUSG00000033721	ProperStrand	9	chr8	129468770	129468850	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-8.2158
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	134705101	134705118	protein_coding	Srcap	utr3	ENSMUSG00000090663	NonProperStrand	11	1	-7.8469
chr15	37932401	37932420	protein_coding	Ubr5	exon	ENSMUSG00000037487	ProperStrand	258	chr11	58115996	58116086	tRNA	tRNA1911-LeuCAA	.	1096321	ProperStrand	165	1	-8.3645
chr4	143748332	143749010	protein_coding	Oog3	exon	ENSMUSG00000050810	NonProperStrand	78	chr4	131908723	131908808	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.8889
chrX	103398701	103398727	protein_coding	Pgk1	utr3	ENSMUSG00000062070	ProperStrand	484	chr1	155287312	155287354	snoRNA	ENSMUSG00000064435_SNORA4	.	ENSMUSG00000064435	ProperStrand	263	2	-10.0420
chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	chr19	8799830	8799886	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-0.7120
chr19	46384452	46384518	protein_coding	Nfkb2	exon	ENSMUSG00000025225	ProperStrand	12	chr12	53383597	53383616	protein_coding	Nubpl	intron	ENSMUSG00000035142	ProperStrand	16	1	-19.5274
chr3	58723288	58723368	LTR	ORR1C2	MaLR	chr3ORR1C258723174	ProperStrand	1	chr3	63154869	63154958	protein_coding	Mme	intron	ENSMUSG00000027820	NonProperStrand	2	1	-inf
chr15	84101747	84103941	protein_coding	Parvb	exon	ENSMUSG00000022438	ProperStrand	127	chr5	108336363	108336408	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-3.4672
chr2	164630656	164630674	protein_coding	Zswim3	utr5	ENSMUSG00000045822	NonProperStrand	16	chr7	116664793	116664852	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-5.0191
chr6	129628834	129628851	protein_coding	Klrc1	exon	ENSMUSG00000030167	NonProperStrand	49	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-8.1448
chr11	97642949	97643083	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	chr12	110923174	110923201	snoRNA	ENSMUSG00000084487_SNORD113	.	ENSMUSG00000084487	ProperStrand	183	6	-7.1621
chr13	88569462	88569482	LTR	RMER6D	ERVK	chr13RMER6D88569354	ProperStrand	42	chr9	120039569	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	3	-9.7399
chr19	4151689	4153253	protein_coding	Coro1b	exon	ENSMUSG00000024835	ProperStrand	13	chr9	15119270	15119296	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	1	-12.8229
chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	chr6	115758066	115758120	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-0.7713
chr8	125009308	125009349	protein_coding	Fam38a	exon	ENSMUSG00000014444	ProperStrand	132	chr9	15119722	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.3754
chr10	7383389	7383405	protein_coding	Pcmt1	utr5	ENSMUSG00000019795	ProperStrand	55	chr6	81992905	81992921	protein_coding	Fam176a	intron	ENSMUSG00000035104	ProperStrand	64	1	-13.3572
chr17	56452595	56454640	protein_coding	Uhrf1	exon	ENSMUSG00000001228	ProperStrand	229	chr8	98269959	98269985	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-3.0199
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-7.9989
chr11	100892597	100892617	protein_coding	Atp6v0a1	intron	ENSMUSG00000019302	ProperStrand	27	chr5	87261000	87261066	protein_coding	Ythdc1	intron	ENSMUSG00000035851	ProperStrand	45	1	-15.5110
chr8	113052191	113052209	protein_coding	Hydin	intron	ENSMUSG00000059854	ProperStrand	47	chr18	73693111	73693138	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-6.0038
chr6	28566030	28566120	protein_coding	Snd1	intron	ENSMUSG00000001424	ProperStrand	210	chr11	69481337	69481417	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-1.1821
chr10	92916286	92916376	protein_coding	Lta4h	exon	ENSMUSG00000015889	NonProperStrand	2	chr16	23110961	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	NonProperStrand	93	1	-20.0851
chr9	78326651	78327909	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr5	130295414	130295508	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	5	-1.9057
chr8	11221331	11221347	protein_coding	Col4a1	exon	ENSMUSG00000031502	ProperStrand	64	chr5	121655031	121655080	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.6277
chrX	159211440	159213680	protein_coding	Rbbp7	exon	ENSMUSG00000031353	ProperStrand	48	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.7522
chr7	104810028	104810048	protein_coding	Rsf1	exon	ENSMUSG00000035623	ProperStrand	48	chr16	23111372	23111446	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-4.6055
chr8	86424368	86424421	protein_coding	Lphn1	utr5	ENSMUSG00000013033	ProperStrand	221	chr9	15119297	15119397	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	7	-18.1298
chr14	20587881	20587958	protein_coding	Nid2	exon	ENSMUSG00000021806	ProperStrand	372	chr7	148634708	148634798	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-0.9968
chr4	48449318	48464816	protein_coding	Tex10	exon	ENSMUSG00000028345	ProperStrand	9	chr6	56782190	56782275	protein_coding	Fkbp9	utr5	ENSMUSG00000029781	ProperStrand	39	1	-17.7730
chr16	4617252	4617966	protein_coding	Pam16	exon	ENSMUSG00000014301	ProperStrand	5	chr11	50599096	50599112	protein_coding	Adamts2	exon	ENSMUSG00000036545	ProperStrand	13	1	-19.9979
chr16	57391760	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr15	88693672	88693772	protein_coding	Pim3	exon	ENSMUSG00000035828	ProperStrand	66	1	-7.6029
chr5	35925730	35925747	lincRNA	4931431C16Rik	exon	ENSMUSG00000055061	ProperStrand	28	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-10.4647
chr17	25608761	25608777	protein_coding	Tekt4	exon	ENSMUSG00000024175	ProperStrand	1	chr3	95463353	95463406	protein_coding	Mcl1	exon	ENSMUSG00000038612	ProperStrand	75	1	-inf
chr12	109449422	109449495	protein_coding	Ccdc85c	intron	ENSMUSG00000084883	ProperStrand	157	chr9	120039540	120039630	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.6919
chr2	90235314	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr13	58228556	58228598	protein_coding	Hnrnpa0	utr3	ENSMUSG00000007836	ProperStrand	110	1	-3.3307
chr4	32066803	32066820	protein_coding	Map3k7	exon	ENSMUSG00000028284	ProperStrand	16	chrX	149828130	149828146	protein_coding	Klf8	utr3	ENSMUSG00000041649	NonProperStrand	107	1	-14.8373
chr18	24113579	24113596	protein_coding	Zfp397	intron	ENSMUSG00000024276	ProperStrand	22	chr4	131865856	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.5019
chr13	12918490	12918580	LTR	IAPLTR3-int	ERVK	chr13IAPLTR3-int12918394	ProperStrand	1	chr13	12918185	12918265	LTR	IAPLTR4	ERVK	chr13IAPLTR412918062	ProperStrand	1	1	-inf
chr4	102649987	102656538	antisense	Gm12709	.	ENSMUSG00000085181	ProperStrand	10	chr7	52382237	52382314	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-11.9423
chr2	90235297	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	113370707	113370723	protein_coding	Adrbk2	exon	ENSMUSG00000042249	ProperStrand	56	2	-7.6340
chr5	115939503	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr16	23111686	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	16	-3.3128
chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	chr9	64024930	64024960	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	1	-4.4172
chr2	90235314	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	37502726	37502742	protein_coding	Strbp	utr5	ENSMUSG00000026915	ProperStrand	90	1	-3.6990
chr12	85703013	85703077	protein_coding	Coq6	exon	ENSMUSG00000021235	ProperStrand	15	chr18	33954911	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	3	-14.4429
chr4	129305880	129305980	protein_coding	Txlna	utr3	ENSMUSG00000053841	ProperStrand	37	chr10	23505559	23505621	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-8.5191
chr5	74489202	74489317	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chrX	146802349	146802367	pseudogene	Gm15105	.	ENSMUSG00000081928	NonProperStrand	2	1	-13.0481
chr11	70542260	70542350	protein_coding	Kif1c	exon	ENSMUSG00000020821	ProperStrand	26	chr1	93878816	93880972	protein_coding	Hdac4	exon	ENSMUSG00000026313	ProperStrand	27	3	-20.5842
chr3	64684327	64684417	LINE	Lx3_Mus	L1	chr3Lx3_Mus64684238	ProperStrand	1	chrX	124780862	124780942	LINE	Lx3A	L1	chrXLx3A124780483	ProperStrand	1	1	-inf
chr8	11209636	11210763	protein_coding	Col4a1	exon	ENSMUSG00000031502	NonProperStrand	10	chr2	144087414	144087462	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-10.1870
chr11	54413682	54413772	protein_coding	Rapgef6	intron	ENSMUSG00000037533	ProperStrand	27	chr5	121655051	121655131	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.2800
chr1	153602594	153602610	protein_coding	Edem3	utr5	ENSMUSG00000043019	ProperStrand	84	chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	1	-8.8144
chr4	132975956	132976036	protein_coding-noncoding	Slc9a1	utr5	ENSMUSG00000028854	NonProperStrand	1	chr4	132975849	132975939	protein_coding	Slc9a1	intron	ENSMUSG00000028854	NonProperStrand	2	1	-inf
mmu-miR-712-5p	6	21	miRNA	mmu-miR-712-5p	.	mmu-miR-712-5p	ProperStrand	1	chr9	57809132	57809149	protein_coding	Sema7a	exon	ENSMUSG00000038264	ProperStrand	43	1	-inf
chr19	38470512	38470530	protein_coding	Tmem20	utr5	ENSMUSG00000044026	NonProperStrand	23	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-8.9102
chr11	6428099	6428155	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr8	112363208	112363232	snoRNA	ENSMUSG00000077549_Snord71	.	ENSMUSG00000077549	ProperStrand	196	1	-1.2691
chr7	133611947	133612047	protein_coding	Sh2b1	exon	ENSMUSG00000030733	ProperStrand	17	chr2	32818900	32818941	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-7.9914
chr11	20118830	20118853	protein_coding	Rab1	exon	ENSMUSG00000020149	ProperStrand	32	chr13	21872001	21872043	protein_coding	Hist1h1b	exon	ENSMUSG00000058773	ProperStrand	65	1	-14.4212
chr18	77474606	77474623	protein_coding	St8sia5	intron	ENSMUSG00000025425	ProperStrand	2	chr10	80859405	80859466	protein_coding	Nfic	utr3	ENSMUSG00000055053	ProperStrand	69	1	-inf
chr4	86500793	86501883	protein_coding	Rps6	exon	ENSMUSG00000028495	ProperStrand	263	chr4	131908689	131908756	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-1.0861
chr17	34165710	34165822	protein_coding	Slc39a7	utr3	ENSMUSG00000024327	ProperStrand	39	chr16	23111758	23111791	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	6	-15.0848
chr17	24641400	24641416	protein_coding	Caskin1	exon	ENSMUSG00000033597	ProperStrand	6	chr8	73419657	73419740	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-17.9496
chr5	74489202	74489262	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chrX	154307637	154307654	protein_coding	Cnksr2	intron	ENSMUSG00000025658	ProperStrand	3	1	-11.9468
chr8	112576416	112576432	LINE	L1_Mus3	L1	chr8L1_Mus3112576213	ProperStrand	24	chr16	4545068	4545089	protein_coding	Tfap4	utr3	ENSMUSG00000005718	ProperStrand	15	1	-18.2518
chr7	20405404	20405420	protein_coding	Bcl3	exon	ENSMUSG00000053175	ProperStrand	10	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-12.5911
chr7	13874769	13876560	protein_coding	Lig1	exon	ENSMUSG00000056394	ProperStrand	89	chr19	8799053	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-5.0638
chr5	141110739	141111144	protein_coding	Ttyh3	exon	ENSMUSG00000036565	ProperStrand	22	chr18	73693109	73693139	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-7.5214
chr4	84192700	84192717	protein_coding	Bnc2	intron	ENSMUSG00000028487	ProperStrand	76	chr6	122269398	122269449	protein_coding	Phc1	exon	ENSMUSG00000040669	ProperStrand	158	1	-10.8947
chr1	90123798	90124639	protein_coding	Heatr7b1	utr5	ENSMUSG00000079429	ProperStrand	147	chr17	24856637	24856737	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-4.6810
chr2	3201673	3222139	protein_coding	Nmt2	exon	ENSMUSG00000026643	ProperStrand	21	chr8	108129151	108129169	protein_coding	Fam65a	utr5	ENSMUSG00000038604	NonProperStrand	7	1	-21.4650
chr2	144087414	144087472	protein_coding	Snx5	intron	ENSMUSG00000027423	ProperStrand	64	chr1	102076758	102076790	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	2	-14.7203
chr2	25741151	25741170	protein_coding	Kcnt1	intron	ENSMUSG00000058740	NonProperStrand	7	chr19	8800356	8800379	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-7.8093
chr17	80661569	80661625	protein_coding	Dhx57	intron	ENSMUSG00000035051	NonProperStrand	1	chr16	23111381	23111471	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-inf
chr6	47731701	47731721	misc_RNA	Y_RNA	.	ENSMUSG00000064945	ProperStrand	93	chr4	122968597	122968675	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	2	-8.8765
chr4	33070540	33070558	protein_coding	Rragd	exon	ENSMUSG00000028278	NonProperStrand	3	chr19	8799022	8799052	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-12.1627
chr2	90235298	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr13	96134935	96138341	protein_coding	Aggf1	exon	ENSMUSG00000021681	ProperStrand	10	2	-12.9834
chr14	45949538	45949554	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	chr4	131865378	131865515	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	2	-2.2721
chr19	40988599	40988626	protein_coding	Zfp518a	exon	ENSMUSG00000049164	ProperStrand	9	chr18	33954816	33954906	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-7.2497
chr6	67217090	67217143	protein_coding	Serbp1	exon	ENSMUSG00000036371	ProperStrand	261	chr10	41644311	41644329	protein_coding	Armc2	exon	ENSMUSG00000071324	ProperStrand	281	1	-7.2844
chr5	111213966	111213995	protein_coding	Ulk1	utr3	ENSMUSG00000029512	ProperStrand	92	chr15	82980090	82980189	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-6.2929
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	120574526	120574575	protein_coding	Tfcp2l1	utr3	ENSMUSG00000026380	ProperStrand	158	1	-2.6871
chr11	83254019	83254035	protein_coding	1700020L24Rik	exon	ENSMUSG00000035085	NonProperStrand	88	chr19	8963024	8963165	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-4.7610
chr4	148335623	148335671	protein_coding	Pex14	exon	ENSMUSG00000028975	ProperStrand	16	chr17	35299510	35299610	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-7.4021
chr9	81949794	81949813	protein_coding	Mei4	intron	ENSMUSG00000043289	NonProperStrand	42	chr7	116663664	116663693	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.1409
chr2	144393657	144393737	protein_coding	Sec23b	exon	ENSMUSG00000027429	ProperStrand	42	chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	1	-10.1155
chr5	93611994	93612046	protein_coding	Ccni	utr3	ENSMUSG00000063015	ProperStrand	43	chrX	34622906	34622952	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-6.4061
chr10	77546402	77546436	LTR	RMER10B	ERVL	chr10RMER10B77546284	ProperStrand	1	chr1	89673595	89673685	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-inf
chr5	96897271	96897361	protein_coding	Fras1	intron	ENSMUSG00000034687	ProperStrand	5	chr14	34780822	34780912	protein_coding	Zfp488	utr3	ENSMUSG00000044519	ProperStrand	54	1	-18.6938
chr14	31826494	31826510	protein_coding	Gnl3	exon	ENSMUSG00000042354	NonProperStrand	59	chr18	35716831	35716878	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.1973
chr4	116875159	116875249	snRNA	ENSMUSG00000070228_U5	.	ENSMUSG00000070228	ProperStrand	131	chr12	106269450	106269530	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-2.7167
chr17	64658867	64658898	protein_coding	Pja2	exon	ENSMUSG00000024083	ProperStrand	27	chr2	32818840	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	8	-20.2873
chr18	35716677	35716768	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	NonProperStrand	45	chr14	33005139	33005219	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	NonProperStrand	13	1	-16.9495
chr9	21050674	21052849	protein_coding	S1pr5	utr5	ENSMUSG00000045087	ProperStrand	1	chr17	39985194	39985250	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-inf
chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	chr15	79908953	79909019	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-1.9931
chr2	147009105	147009122	protein_coding	Nkx2-2	utr3	ENSMUSG00000027434	NonProperStrand	84	chr3	145311561	145311629	protein_coding	Cyr61	exon	ENSMUSG00000028195	ProperStrand	13	1	-15.7623
chr12	17552948	17552994	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr12	110874226	110874289	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	1	-2.0682
chr6	57641953	57641971	protein_coding	Pigy	exon	ENSMUSG00000043162	ProperStrand	1	chr8	64017614	64028377	protein_coding	Palld	exon	ENSMUSG00000058056	NonProperStrand	125	1	-inf
chr1	20552541	20552557	protein_coding	Pkhd1	exon	ENSMUSG00000043760	NonProperStrand	49	chr16	23111452	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.5489
chr1	89158998	89159088	LTR	RMER15	ERVL	chr1RMER1589158768	NonProperStrand	1	chr1	89158538	89158628	SINE	B1_Mur2	Alu	chr1B1_Mur289158524	NonProperStrand	1	1	-inf
chr3	122199201	122199289	protein_coding	Bcar3	intron	ENSMUSG00000028121	ProperStrand	21	chr9	73981603	73981621	protein_coding	Wdr72	intron	ENSMUSG00000044976	NonProperStrand	12	1	-19.1087
chr1	72871208	72871320	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	chr1	192712615	192712631	protein_coding	Rps6kc1	exon	ENSMUSG00000089872	ProperStrand	241	1	-6.7153
chr9	40611921	40612011	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr6	71832573	71832653	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-1.1076
chr16	90775135	90776374	protein_coding	Urb1	exon	ENSMUSG00000039929	ProperStrand	71	chr3	123210916	123210972	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.7983
chr18	73693168	73693189	rRNA	n-R5-8s1	.	ENSMUSG00000065922	NonProperStrand	5	chrX	34622906	34623037	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	NonProperStrand	26	1	-19.2794
chr6	123089131	123089269	protein_coding	Clec4a2	exon	ENSMUSG00000030148	ProperStrand	44	chr7	19591412	19591428	protein_coding	Irf2bp1	exon	ENSMUSG00000044030	NonProperStrand	81	1	-13.3402
chr19	5801220	5801286	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr2	63936036	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-2.3816
chr17	43804486	43804502	protein_coding	Cyp39a1	utr5	ENSMUSG00000023963	NonProperStrand	81	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-10.1601
chr1	89124474	89124519	protein_coding	Eif4e2	utr3	ENSMUSG00000026254	ProperStrand	26	chr14	76247781	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-5.7966
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr8	47825936	47825954	protein_coding	Irf2	intron	ENSMUSG00000031627	ProperStrand	4	1	-17.0390
chr11	4820972	4820990	protein_coding	Thoc5	intron	ENSMUSG00000034274	ProperStrand	325	chr19	8799581	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	2	-5.9675
mmu-miR-1949	0	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	mmu-miR-6240	1	23	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	1	-1.3161
chr2	27001912	27001992	antisense	Gm13399	.	ENSMUSG00000085008	NonProperStrand	8	chr1	158864840	158864930	protein_coding	Ralgps2	intron	ENSMUSG00000026594	ProperStrand	16	1	-19.1029
chr4	116826697	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	3	-1.8467
chr2	154171683	154171700	protein_coding	Cdk5rap1	exon	ENSMUSG00000027487	ProperStrand	75	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.4339
chr11	31258350	31258369	protein_coding	Stc2	utr3	ENSMUSG00000020303	ProperStrand	18	chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-8.8757
chr13	18311935	18311952	protein_coding	Pou6f2	intron	ENSMUSG00000009734	NonProperStrand	5	chr4	131865855	131865928	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-6.5022
chr5	144774947	144774970	snRNA	ENSMUSG00000064963_U6	.	ENSMUSG00000064963	ProperStrand	4	chr6	71832581	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-11.2428
chr9	61761266	61761696	protein_coding	Rplp1	exon	ENSMUSG00000007892	ProperStrand	116	chr5	130300528	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.4601
chr13	9833566	9833685	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	2	-4.1813
chr4	117811168	117811476	protein_coding	Kdm4a	exon	ENSMUSG00000033326	ProperStrand	81	chr1	182824434	182824471	protein_coding	Lefty2	exon	ENSMUSG00000066652	ProperStrand	48	1	-13.1596
chr19	24552582	24552600	protein_coding	Pip5k1b	intron	ENSMUSG00000024867	NonProperStrand	40	chr9	120039533	120039603	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-4.0730
chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-4.7462
chr11	120440505	120440595	protein_coding	Arhgdia	utr3	ENSMUSG00000025132	ProperStrand	39	chr4	131908812	131908892	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.8599
chr3	35725890	35725907	protein_coding	Atp11b	exon	ENSMUSG00000037400	NonProperStrand	18	chr1	42755254	42755270	protein_coding	Pou3f3	exon	ENSMUSG00000045515	NonProperStrand	117	1	-14.4114
chr1	130228279	130228370	protein_coding	Mcm6	utr3	ENSMUSG00000026355	ProperStrand	69	chrX	160377262	160377280	protein_coding	Zrsr2	exon	ENSMUSG00000031370	ProperStrand	57	1	-13.1351
chr13	21349823	21349839	SINE	B3	B2	chr13B321349736	ProperStrand	3	chr1	162967490	162967535	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-16.1991
chr18	3342856	3342886	lincRNA	Gm6225	intron	ENSMUSG00000091488	ProperStrand	3	chr5	113919913	113919930	protein_coding	Wscd2	utr5	ENSMUSG00000085571	NonProperStrand	40	1	-20.6314
chrX	34622906	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	chr8	113366286	113366354	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	2	-0.7546
chr5	142285868	142285884	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	chr6	125136513	125136538	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	1	-3.8500
chr7	87450911	87451318	protein_coding	Prc1	exon	ENSMUSG00000038943	ProperStrand	35	chr16	23110986	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.8578
chr19	10281730	10281776	protein_coding	1810006K21Rik	exon	ENSMUSG00000036372	ProperStrand	9	chr10	127521225	127521270	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	1	-12.6797
chr7	119934438	119934485	protein_coding	Tead1	intron	ENSMUSG00000055320	ProperStrand	217	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	5	-6.9644
chr3	59056139	59056193	protein_coding	Med12l	exon	ENSMUSG00000056476	ProperStrand	18	chr4	131866155	131866246	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	10	-19.7853
chr14	32912755	32912796	protein_coding	Oxnad1	exon	ENSMUSG00000021906	ProperStrand	11	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-11.1823
chr9	51876944	51877745	protein_coding	Rdx	exon	ENSMUSG00000032050	ProperStrand	60	chr5	108334247	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-4.8200
chr17	28958263	28958338	protein_coding	Brpf3	exon	ENSMUSG00000063952	ProperStrand	32	chr1	162967512	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	3	-11.1689
chr1	153207938	153208082	protein_coding	Ivns1abp	exon	ENSMUSG00000023150	ProperStrand	51	chr17	24856620	24856680	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	2	-10.8943
chr4	42996293	42996318	protein_coding	Vcp	exon	ENSMUSG00000028452	ProperStrand	108	chr9	15119630	15119712	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.6697
chr19	45129145	45129172	protein_coding	Sfxn3	exon	ENSMUSG00000025212	ProperStrand	14	chr4	131908236	131908342	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	8	-inf
chr3	110053068	110053158	protein_coding	Prmt6	exon	ENSMUSG00000049300	ProperStrand	4	chr16	23111397	23111477	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-6.3168
chr3	68847712	68847756	protein_coding	Trim59	utr5	ENSMUSG00000034317	ProperStrand	22	chr11	97642952	97643072	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.3090
chr14	56247903	56247955	protein_coding	Ipo4	exon	ENSMUSG00000002319	ProperStrand	62	chr15	79913288	79913342	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-6.0084
chr4	131908389	131908466	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr13	62944660	62944677	protein_coding	Fbp2	intron	ENSMUSG00000021456	ProperStrand	100	1	-6.2479
chr15	27832308	27832324	protein_coding	Trio	exon	ENSMUSG00000022263	ProperStrand	108	chr4	131865854	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-3.0785
chr10	23505158	23505235	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	NonProperStrand	45	chr7	29136632	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	NonProperStrand	27	1	-15.5038
chr17	27236036	27236052	protein_coding	Itpr3	exon	ENSMUSG00000042644	ProperStrand	137	chr4	131908356	131908444	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-1.0127
chr14	20625226	20627191	protein_coding	Nid2	exon	ENSMUSG00000021806	ProperStrand	372	chr4	131865454	131865515	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-1.0075
chr1	152268927	152269668	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	chr3	88716209	88716659	protein_coding	Msto1	exon	ENSMUSG00000068922	ProperStrand	36	1	-9.9367
chr13	54723202	54723218	protein_coding	Faf2	exon	ENSMUSG00000025873	ProperStrand	90	chr19	8963027	8963183	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-3.0219
chr9	118806472	118806490	lincRNA	Gm2415	intron	ENSMUSG00000086119	ProperStrand	2	chr19	8798740	8798768	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-12.1939
chr1	162967525	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	chr13	22107678	22107719	tRNA	tRNA974-ValAAC	.	1136459	ProperStrand	28	1	-4.9223
chr2	121949510	121949527	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	chr19	8963026	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-0.8164
chr12	110782417	110782517	lincRNA	Meg3	exon	ENSMUSG00000021268	ProperStrand	61	chr1	88247769	88247804	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-5.0648
chr11	69481387	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	chr11	69482361	69482386	snoRNA	ENSMUSG00000089542_snoU6-77	.	ENSMUSG00000089542	ProperStrand	138	5	-9.1538
chr5	108334258	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	chr12	110887828	110887893	snoRNA	ENSMUSG00000084549_SNORD113	.	ENSMUSG00000084549	ProperStrand	196	2	-4.6117
chr11	116403106	116403206	protein_coding	Ube2o	exon	ENSMUSG00000020802	ProperStrand	134	chr5	130300477	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-2.4087
chr8	107263518	107263535	protein_coding	Ces2a	exon	ENSMUSG00000055730	NonProperStrand	2	chr4	132394350	132394418	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	1	-16.7255
chr19	5798622	5798696	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr4	149191855	149191901	rRNA	n-R5s193	.	ENSMUSG00000064798	ProperStrand	17	3	-inf
chr2	37502726	37502742	protein_coding	Strbp	utr5	ENSMUSG00000026915	ProperStrand	90	chr10	5992231	5992308	protein_coding	Akap12	exon	ENSMUSG00000038587	ProperStrand	1008	2	-11.0629
chr7	13880864	13881637	protein_coding	Lig1	exon	ENSMUSG00000056394	ProperStrand	89	chr3	123210853	123210879	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.4585
chr10	82286740	82286757	protein_coding	1700028I16Rik	utr3	ENSMUSG00000056821	ProperStrand	18	chr14	76247754	76247791	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-6.5333
chr7	35983752	35983768	protein_coding	Slc7a10	exon	ENSMUSG00000030495	NonProperStrand	33	chr7	29146043	29146064	protein_coding	Plekhg2	exon	ENSMUSG00000037552	ProperStrand	6	1	-18.8073
chr7	129312624	129312721	protein_coding	Plk1	exon	ENSMUSG00000030867	ProperStrand	146	chr14	76247809	76247842	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-2.5586
chr6	86477174	86477191	lincRNA	1600020E01Rik	exon	ENSMUSG00000086488	NonProperStrand	10	chr7	52381495	52381532	protein_coding	Rpl13a	exon	ENSMUSG00000074129	ProperStrand	269	1	-13.9745
chr8	73115775	73115791	protein_coding	Ell	utr3	ENSMUSG00000070002	NonProperStrand	134	chr11	106362637	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-5.8172
chr6	115757992	115758132	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr17	24856619	24856709	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	6	-3.3775
chr6	115757998	115758119	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr2	32818850	32818941	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	5	-0.9929
chr4	155539433	155545520	protein_coding	Agrn	utr3	ENSMUSG00000041936	ProperStrand	175	chr9	15119720	15119968	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-1.9753
chr2	26767737	26767759	protein_coding-noncoding	Rpl7a	utr5	ENSMUSG00000062647	ProperStrand	53	chr19	43461224	43461240	protein_coding	Hpse2	intron	ENSMUSG00000074852	ProperStrand	8	1	-17.5872
chr9	57217029	57217046	LINE	Lx4A	L1	chr9Lx4A57216705	ProperStrand	16	chr19	5695302	5695563	protein_coding	Map3k11	exon	ENSMUSG00000004054	ProperStrand	12	1	-20.0643
chr5	75995684	75995718	protein_coding	Kit	intron	ENSMUSG00000005672	NonProperStrand	3	chr12	111929759	111929847	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	1	-14.6292
chr6	87739737	87739837	protein_coding	Rab43	utr3	ENSMUSG00000030055	ProperStrand	8	chr16	23110901	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.2180
chr3	116608467	116608532	SINE	B1_Mur3	Alu	chr3B1_Mur3116608441	ProperStrand	1	chr9	64026178	64026211	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	1	-inf
chr4	43505805	43505895	protein_coding-noncoding	Ccdc107	utr5	ENSMUSG00000028461	ProperStrand	106	chr16	96343283	96343305	protein_coding	Hmgn1	utr3	ENSMUSG00000040681	NonProperStrand	4	1	-17.7101
chr5	93370804	93370894	protein_coding	Shroom3	exon	ENSMUSG00000029381	ProperStrand	52	chr19	8963094	8963174	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.5173
chr18	33954757	33954773	lincRNA	2410004N09Rik	exon	ENSMUSG00000087590	ProperStrand	15	chr7	116664866	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-8.5515
chrX	137010012	137010126	protein_coding	Prps1	utr3	ENSMUSG00000031432	ProperStrand	17	chr3	152450610	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	2	-17.7301
chr1	31003447	31006405	protein_coding	Ptp4a1	utr5	ENSMUSG00000026064	ProperStrand	26	chr16	23111732	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-8.4937
chr2	26315096	26315186	protein_coding	Notch1	exon	ENSMUSG00000026923	ProperStrand	145	chr11	97642963	97643043	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.1218
chr7	86583185	86583251	protein_coding	Fanci	exon	ENSMUSG00000039187	ProperStrand	25	chr11	101304972	101306612	protein_coding	Rpl27	exon	ENSMUSG00000063316	ProperStrand	96	9	-inf
chr1	90967076	90967123	protein_coding	Sh3bp4	utr5	ENSMUSG00000036206	ProperStrand	20	chr14	31827478	31827544	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-9.1565
chr9	57253860	57253877	SINE	B1_Mm	Alu	chr9B1_Mm57253847	ProperStrand	39	chr7	117190017	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.1353
chr16	4886395	4886411	protein_coding	Mgrn1	exon	ENSMUSG00000022517	NonProperStrand	157	chr9	50816824	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	1	-9.8782
chr18	12914727	12976227	protein_coding	Osbpl1a	exon	ENSMUSG00000044252	ProperStrand	39	chr16	23110882	23110972	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.5380
chr4	151623958	151624011	protein_coding	Acot7	intron	ENSMUSG00000028937	ProperStrand	15	chr5	125531369	125531385	protein_coding	Ncor2	exon	ENSMUSG00000029478	ProperStrand	377	1	-12.4507
chr3	137527600	137527639	protein_coding	H2afz	utr5	ENSMUSG00000037894	ProperStrand	72	chr16	23110457	23110557	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-3.8673
chr9	106740638	106740659	protein_coding	Vprbp	exon	ENSMUSG00000040325	ProperStrand	35	chr12	55797798	55797932	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	1	-8.7791
chr4	41141565	41141608	protein_coding	Ubap2	utr3	ENSMUSG00000028433	ProperStrand	292	chr7	28244275	28244319	protein_coding	Blvrb	exon	ENSMUSG00000040466	ProperStrand	11	2	-19.3619
chr4	147475493	147475509	protein_coding	2610109H07Rik	utr3	ENSMUSG00000029005	NonProperStrand	46	chr2	166889011	166889055	snoRNA	ENSMUSG00000077515_SNORD12	.	ENSMUSG00000077515	ProperStrand	191	1	-11.5266
chr13	14703801	14703823	protein_coding	Mrpl32	exon	ENSMUSG00000015672	ProperStrand	7	chr7	118219574	118219678	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	3	-20.5651
chr11	117881674	117881731	protein_coding	Pgs1	intron	ENSMUSG00000017715	ProperStrand	25	chr1	180267725	180267806	protein_coding	Hnrnpu	utr5	ENSMUSG00000039630	ProperStrand	286	2	-19.5183
chr10	61137660	61137677	SINE	B4A	B4	chr10B4A61137607	ProperStrand	4	chr15	78722362	78722416	protein_coding	Gga1	exon	ENSMUSG00000033128	ProperStrand	15	1	-21.2797
chr15	99329179	99329195	protein_coding	Faim2	utr3	ENSMUSG00000023011	ProperStrand	45	chr9	120038000	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-5.2634
chr18	41356147	41356185	miRNA	Mir5097	dead	ENSMUSG00000093361	ProperStrand	221	chr15	79908930	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-3.0200
chr1	33828652	33828669	protein_coding	Zfp451	intron	ENSMUSG00000042197	NonProperStrand	393	chr11	62416578	62416645	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-1.7915
chr2	150153957	150154038	protein_coding	3300002I08Rik	intron	ENSMUSG00000063364	NonProperStrand	8	chr4	131865966	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	5	-19.2540
chr11	74481451	74481616	protein_coding	1300001I01Rik	exon	ENSMUSG00000020741	ProperStrand	76	chr7	150699566	150699656	protein_coding	Nap1l4	utr3	ENSMUSG00000059119	ProperStrand	31	1	-14.1665
chr4	116875154	116875250	snRNA	ENSMUSG00000070228_U5	.	ENSMUSG00000070228	ProperStrand	131	chr16	23110876	23111001	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	10	-3.9351
chr1	90161336	90161423	protein_coding	Hjurp	utr3	ENSMUSG00000044783	ProperStrand	110	chr2	26768398	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	3	-10.6045
chr7	112782969	112782985	protein_coding	Arfip2	utr3	ENSMUSG00000030881	ProperStrand	191	chr18	75161533	75161583	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-4.9325
chr9	48877878	48879712	protein_coding	Zw10	exon	ENSMUSG00000032264	ProperStrand	20	chr7	116663634	116663724	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.5385
chr15	34361335	34361351	protein_coding	Matn2	exon	ENSMUSG00000022324	ProperStrand	8	chr9	64023228	64023272	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	1	-12.5780
chr19	41406795	41406811	protein_coding	Pik3ap1	utr5	ENSMUSG00000025017	ProperStrand	16	chr1	162965531	162965550	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.8202
chr11	76622267	76622375	protein_coding	Cpd	exon	ENSMUSG00000020841	ProperStrand	46	chr11	62418038	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	9	-inf
chr12	118822629	118833724	protein_coding	Rapgef5	exon	ENSMUSG00000041992	ProperStrand	14	chr4	131865428	131865518	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-6.8658
chr7	134890390	134890417	protein_coding	Fbxl19	utr5	ENSMUSG00000030811	ProperStrand	15	chr2	149941915	149941932	protein_coding	Zfp120	utr3	ENSMUSG00000068134	ProperStrand	5	1	-20.3414
chr9	21483586	21490476	protein_coding	Smarca4	exon	ENSMUSG00000032187	ProperStrand	196	chr18	35714223	35714259	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-2.7462
chr3	95980328	95980410	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	chr14	52829496	52829570	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-2.0916
chr2	134897228	134897248	protein_coding	Plcb1	intron	ENSMUSG00000051177	ProperStrand	13	chr15	79913307	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-6.5816
chr10	53010756	53010819	LINE	Lx5	L1	chr10Lx553010469	NonProperStrand	1	chr16	23110990	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr7	13516163	13516203	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr7	117166770	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-0.9243
chr15	77096429	77096523	protein_coding	Rbfox2	intron	ENSMUSG00000033565	ProperStrand	55	chr17	24665444	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-5.1094
chr11	100581379	100581396	protein_coding	Rab5c	utr5	ENSMUSG00000019173	ProperStrand	76	chr13	21272516	21272591	protein_coding	Trim27	exon	ENSMUSG00000021326	ProperStrand	28	1	-14.3705
chr12	114290175	114290191	protein_coding	Pacs2	intron	ENSMUSG00000021143	NonProperStrand	302	chr4	118951642	118951686	protein_coding	Ybx1	exon	ENSMUSG00000028639	ProperStrand	171	1	-7.9804
chr5	89663839	89663855	protein_coding	Slc4a4	exon	ENSMUSG00000060961	NonProperStrand	195	chr9	15119631	15119700	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-0.8688
chr5	148113281	148113297	protein_coding	Cdx2	utr3	ENSMUSG00000029646	ProperStrand	276	chr2	26494777	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-0.7823
chr5	50370297	50370348	protein_coding	Gpr125	exon	ENSMUSG00000029090	ProperStrand	29	chr4	131908357	131908439	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	7	-18.2750
chr4	131908874	131908903	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr17	36000485	36000501	protein_coding	Nrm	exon	ENSMUSG00000059791	ProperStrand	253	1	-4.4498
chr15	79551280	79551352	protein_coding	Gtpbp1	utr3	ENSMUSG00000042535	ProperStrand	56	chr10	23505152	23505197	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-2.5394
chr11	101386361	101386451	protein_coding	Brca1	exon	ENSMUSG00000017146	ProperStrand	51	chr2	34629408	34629559	protein_coding	Hspa5	exon	ENSMUSG00000026864	ProperStrand	181	1	-11.4262
chr14	103488883	103488983	protein_coding-noncoding	Fbxl3	utr3	ENSMUSG00000022124	ProperStrand	17	chr17	13112498	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	15	-20.2238
chr3	68889102	68889147	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	chr13	23610047	23610099	tRNA	tRNA112-SerTGA	.	1050518	ProperStrand	9	2	-11.4005
chr2	154674829	154674929	protein_coding	Raly	intron	ENSMUSG00000027593	ProperStrand	116	chr8	32260335	32260386	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-3.3936
chr3	89139392	89141773	protein_coding	Efna4	exon	ENSMUSG00000028040	NonProperStrand	7	chr19	8963129	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-6.3961
chr16	5256015	5256031	protein_coding	Fam86	utr5	ENSMUSG00000022544	ProperStrand	231	chr4	131865855	131865989	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-1.1323
chr13	21842244	21842334	protein_coding	Hist1h4k	exon	ENSMUSG00000064288	ProperStrand	46	chr18	33954820	33954900	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-6.7352
chr2	179937187	179941504	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr8	32260335	32260362	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-1.4831
chr14	73981774	73981814	protein_coding	Sucla2	intron	ENSMUSG00000022110	ProperStrand	20	chr8	98265783	98265900	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	1	-12.2166
chr5	74489217	74489296	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr1	93897927	93898017	protein_coding	Hdac4	intron	ENSMUSG00000026313	ProperStrand	27	1	-7.2076
chr7	87535444	87535530	protein_coding	Furin	utr3	ENSMUSG00000030530	ProperStrand	22	chr11	62418035	62418062	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-7.5551
chr11	69553582	69553600	protein_coding	Polr2a	exon	ENSMUSG00000005198	ProperStrand	200	chr2	146168313	146168412	protein_coding	Ralgapa2	exon	ENSMUSG00000037110	ProperStrand	35	4	-20.9418
chr12	81284397	81284474	protein_coding	Actn1	exon	ENSMUSG00000015143	ProperStrand	128	chr17	35089181	35089231	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	6	-18.3339
chr7	58702972	58702988	LINE	Lx8	L1	chr7Lx858702645	ProperStrand	6	chr4	131399490	131399506	protein_coding	Mecr	exon	ENSMUSG00000028910	NonProperStrand	109	1	-16.7857
chr5	93590211	93591154	protein_coding	Sept11	exon	ENSMUSG00000058013	ProperStrand	79	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-7.6098
chr2	26238977	26239008	protein_coding	Sdccag3	utr3	ENSMUSG00000026927	ProperStrand	10	chr3	88497893	88497980	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-11.1129
chr3	85942725	85942807	protein_coding	Rps3a	intron	ENSMUSG00000028081	ProperStrand	177	chr2	63936035	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-5.7228
chr8	59992777	59992948	protein_coding	Hmgb2	utr3	ENSMUSG00000054717	ProperStrand	184	chr16	23110472	23110915	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-1.6710
chr1	150200850	150200930	LINE	L1Md_F2	L1	chr1L1Md_F2150200861	ProperStrand	1	chr1	150200588	150200678	LTR	IAPEY_LTR	ERVK	chr1IAPEY_LTR150200532	ProperStrand	1	1	-inf
chr1	63224441	63225025	protein_coding	Eef1b2	exon	ENSMUSG00000025967	ProperStrand	106	chr12	21396477	21396513	protein_coding	Ywhaq	utr3	ENSMUSG00000076432	ProperStrand	70	1	-11.8603
chr10	116490087	116490152	protein_coding	Cct2	exon	ENSMUSG00000034024	ProperStrand	100	chr17	24857722	24857813	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	10	-20.1050
chr16	3981958	3981982	protein_coding-noncoding	Slx4	utr3	ENSMUSG00000039738	ProperStrand	2	chr9	39358287	39358304	protein_coding	Olfr958	exon	ENSMUSG00000050853	NonProperStrand	266	1	-18.1218
chr1	154691372	154713765	protein_coding	Smg7	exon	ENSMUSG00000042772	ProperStrand	88	chr5	130300421	130300554	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	6	-11.8979
chr3	14844752	14844771	LTR	ORR1B2	MaLR	chr3ORR1B214844497	ProperStrand	1	chr8	86192637	86192653	protein_coding	Ptger1	exon	ENSMUSG00000019464	ProperStrand	6	1	-inf
chr7	28137760	28139465	protein_coding	Shkbp1	exon	ENSMUSG00000089832	ProperStrand	7	chr9	120038471	120038551	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-7.2707
chr16	5256015	5256031	protein_coding	Fam86	utr5	ENSMUSG00000022544	ProperStrand	231	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-2.5523
chr11	100275659	100275677	protein_coding	Leprel4	exon	ENSMUSG00000006931	ProperStrand	32	chr5	145532202	145532278	protein_coding	Trrap	intron	ENSMUSG00000045482	ProperStrand	399	1	-10.7866
chr9	40612830	40612908	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	chr18	75161534	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-3.5691
chr17	24301695	24301785	protein_coding	Atp6v0c	exon	ENSMUSG00000024121	ProperStrand	75	chr7	116663634	116663762	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	19	-inf
chr17	24858765	24858826	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr16	23110492	23110549	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	4	-1.6744
chr16	72754358	72754448	protein_coding	Robo1	intron	ENSMUSG00000022883	ProperStrand	47	chr4	131908264	131908344	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.7849
chr6	115737251	115737267	protein_coding	Cand2	exon	ENSMUSG00000030319	ProperStrand	40	chrX	84483704	84483746	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-9.0633
chr14	105576064	105576103	protein_coding	Rbm26	utr5	ENSMUSG00000022119	ProperStrand	60	chr4	131866238	131866282	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-3.6651
chr9	78327235	78327335	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr10	90581059	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	22	-19.8049
chr11	45958231	45958248	protein_coding	Adam19	utr3	ENSMUSG00000011256	ProperStrand	134	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-4.2902
chr14	105888494	105888518	LTR	RLTR20B3	ERVK	chr14RLTR20B3105888065	ProperStrand	1	chr16	23110909	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr13	56175430	56175506	protein_coding	H2afy	utr3	ENSMUSG00000015937	ProperStrand	103	chr2	130101971	130102003	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	2	-7.1988
chr18	47865514	47865530	SINE	B3A	B2	chr18B3A47865439	NonProperStrand	2	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-14.0400
chr13	32911192	32912237	protein_coding	Wrnip1	intron	ENSMUSG00000021400	ProperStrand	16	chrX	34622906	34622965	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-9.3901
chr5	65782064	65782085	protein_coding	Rpl9	exon	ENSMUSG00000047215	ProperStrand	113	chr1	63225629	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	3	-12.6276
chr3	114371590	114371680	LINE	L1Md_F2	L1	chr3L1Md_F2114371134	ProperStrand	1	chr3	114372224	114372304	LINE	L1Md_F2	L1	chr3L1Md_F2114371689	NonProperStrand	1	1	-inf
chr9	92468370	92476058	protein_coding	Plod2	exon	ENSMUSG00000032374	ProperStrand	52	chr11	62416981	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	2	-10.2550
chr6	38441550	38441568	protein_coding	Ubn2	exon	ENSMUSG00000038538	ProperStrand	86	chr17	33961611	33966613	protein_coding	Ndufa7	exon	ENSMUSG00000041881	ProperStrand	64	1	-12.4597
chr18	57531025	57531106	protein_coding	Prrc1	exon	ENSMUSG00000024594	ProperStrand	22	chr4	131865856	131865946	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.5019
chr12	104317206	104317223	protein_coding	Unc79	exon	ENSMUSG00000021198	ProperStrand	99	chr12	111932481	111932551	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	1	-7.2613
chr11	101386282	101386298	protein_coding	Brca1	exon	ENSMUSG00000017146	NonProperStrand	1	chr4	131866608	131866664	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	1	-inf
chrX	84483699	84483758	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr9	15119631	15119968	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	6	-1.1387
chr3	153575087	153575168	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	chr18	33954815	33954950	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	10	-8.2010
chr9	76549098	76549114	Simple_repeat	(TTCTCC)n	Simple_repeat	chr9(TTCTCC)n76549100	NonProperStrand	1	chr1	162965978	162965999	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-inf
chr10	43621687	43621749	protein_coding	Rtn4ip1	utr5	ENSMUSG00000019864	ProperStrand	14	chr17	34065682	34065727	protein_coding	Tapbp	utr3	ENSMUSG00000024308	ProperStrand	14	1	-inf
chr19	43579408	43579425	protein_coding	Got1	intron	ENSMUSG00000025190	NonProperStrand	147	chr11	106362303	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-4.1156
chr9	120038467	120038673	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	chr9	64023227	64023329	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	4	-1.0042
chr15	26129084	26129103	LINE	Lx8	L1	chr15Lx826128743	NonProperStrand	2	chr4	131908357	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-8.3123
chr2	130104722	130104774	protein_coding	Nop56	exon	ENSMUSG00000027405	ProperStrand	125	chr5	23825941	23825957	protein_coding	Kcnh2	exon	ENSMUSG00000038319	ProperStrand	242	1	-9.0458
chr10	59763614	59764516	protein_coding	Psap	utr3	ENSMUSG00000004207	ProperStrand	124	chr10	110918548	110918628	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-2.1789
chr16	78298822	78298922	LTR	MERVL_2A-int	ERVL	chr16MERVL_2A-int78298406	ProperStrand	1	chr4	131908236	131908284	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-inf
chr4	151478826	151480236	protein_coding	Plekhg5	exon	ENSMUSG00000039713	ProperStrand	33	chr4	131908236	131908292	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.3621
chr4	116862586	116862663	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	chr18	75161536	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	3	-7.4827
chr13	23853847	23853947	protein_coding	Hist1h3a	exon	ENSMUSG00000069265	ProperStrand	12	chr10	39978447	39978485	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-8.6976
chr17	5411389	5411448	protein_coding	5730437N04Rik	exon	ENSMUSG00000004945	ProperStrand	4	chr12	112779206	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-10.3781
chr17	35042388	35042589	protein_coding	Ehmt2	exon	ENSMUSG00000013787	ProperStrand	42	chr12	55835643	55835704	snRNA	ENSMUSG00000075960_U1	.	ENSMUSG00000075960	ProperStrand	210	2	-18.2935
chr18	6450773	6450863	protein_coding	Epc1	intron	ENSMUSG00000024240	ProperStrand	9	chr19	8963087	8963167	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-9.7258
chr17	27893515	27893557	protein_coding	D17Wsu92e	intron	ENSMUSG00000056692	ProperStrand	61	chr5	147646752	147646842	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	1	-7.9254
chr17	23955820	23955839	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	chr11	6428035	6428097	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-4.7260
chr1	71644071	71644171	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr13	49779751	49779802	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-1.9206
chr6	93742378	93742394	protein_coding	Magi1	exon	ENSMUSG00000045095	ProperStrand	106	chr11	116704532	116704550	protein_coding	Jmjd6	utr5	ENSMUSG00000056962	ProperStrand	92	1	-11.3113
chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	5	-2.0672
chr6	144443231	144443249	lincRNA	Gm15685	intron	ENSMUSG00000087157	ProperStrand	24	chr19	44380411	44380434	protein_coding	Scd2	utr3	ENSMUSG00000025203	ProperStrand	219	1	-12.5717
chr5	143666266	143668429	protein_coding	Actb	exon	ENSMUSG00000029580	ProperStrand	446	chr11	68886942	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	2	-1.7664
chr15	34069623	34070520	protein_coding	Mtdh	utr3	ENSMUSG00000022255	ProperStrand	37	chr5	74489618	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-4.6969
chr7	52382755	52382801	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	chr2	130103751	130103810	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-2.2255
chr1	88423315	88427241	protein_coding	Ptma	utr3	ENSMUSG00000026238	ProperStrand	385	chr16	23110829	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	23	-3.5124
chr11	69481432	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	chrX	143918835	143918887	snoRNA	ENSMUSG00000084421_SNORA35	.	ENSMUSG00000084421	ProperStrand	293	1	-0.7739
chr5	31380043	31380265	protein_coding	Cad	exon	ENSMUSG00000013629	ProperStrand	260	chr14	57743188	57743206	protein_coding	Gjb6	exon	ENSMUSG00000040055	NonProperStrand	2	1	-18.0372
chr18	34785177	34785257	protein_coding	Kif20a	exon	ENSMUSG00000003779	ProperStrand	50	chr7	116664833	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-4.9887
chr19	44380210	44380263	protein_coding	Scd2	utr3	ENSMUSG00000025203	ProperStrand	219	chr18	73693166	73693184	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-3.0834
chr6	97112905	97112941	snoRNA	ENSMUSG00000065728_SNORA36	.	ENSMUSG00000065728	ProperStrand	158	chr11	69483189	69483279	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-3.1885
chr10	39452167	39452184	protein_coding	Rev3l	utr5	ENSMUSG00000019841	ProperStrand	39	chr11	97643037	97643080	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.2331
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr4	34030856	34030872	protein_coding	Cnr1	exon	ENSMUSG00000044288	ProperStrand	8	1	-13.0389
chr4	116358249	116360017	protein_coding	Prdx1	utr5	ENSMUSG00000028691	ProperStrand	41	chr10	17547610	17547626	protein_coding	Txlnb	exon	ENSMUSG00000039891	ProperStrand	70	1	-13.7764
chr8	87223594	87223612	protein_coding	Trmt1	exon	ENSMUSG00000001909	NonProperStrand	60	chr2	130103444	130103502	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-8.0633
chr19	4398042	4398059	protein_coding	Kdm2a	utr5	ENSMUSG00000054611	ProperStrand	71	chrX	120217486	120217504	protein_coding	3110007F17Rik	intron	ENSMUSG00000079450	NonProperStrand	18	1	-15.4026
chr1	88252836	88252886	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	chr17	35299507	35299642	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	5	-1.6281
chr2	69588095	69588132	protein_coding	Ppig	exon	ENSMUSG00000042133	ProperStrand	13	chr6	124665349	124665439	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	3	-19.9172
chr16	16231028	16231132	protein_coding	Pkp2	intron	ENSMUSG00000041957	ProperStrand	19	chr7	52713930	52713963	protein_coding	Ftl1	exon	ENSMUSG00000050708	ProperStrand	807	3	-19.8369
chr4	153526944	153526990	protein_coding-noncoding	Wdr8	utr5	ENSMUSG00000029029	ProperStrand	1	chr2	48927391	48927407	protein_coding	Mbd5	intron	ENSMUSG00000036792	NonProperStrand	25	1	-inf
chr5	130764734	130764800	protein_coding	Tyw1	exon	ENSMUSG00000056310	ProperStrand	32	chr15	79908955	79908984	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	8	-19.4225
chr14	56159295	56159314	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	chr11	77995189	77995237	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-3.9023
mmu-miR-1949	5	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr19	58590660	58590752	protein_coding	1700011F14Rik	intron	ENSMUSG00000025090	ProperStrand	4	4	-inf
chr8	87580918	87580965	protein_coding	Tnpo2	utr3	ENSMUSG00000031691	ProperStrand	92	chr9	64023678	64023746	snoRNA	ENSMUSG00000064918_SNORD18	.	ENSMUSG00000064918	ProperStrand	370	1	-8.8124
chr12	85943980	85944044	protein_coding	Abcd4	utr3	ENSMUSG00000021240	ProperStrand	6	chr7	29136575	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-6.8330
chr6	10277503	10277525	LINE	Lx8	L1	chr6Lx810277377	ProperStrand	1	chr2	26493467	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	1	-inf
chr15	99544208	99544298	protein_coding	Smarcd1	utr3	ENSMUSG00000023018	ProperStrand	43	chr11	69481337	69481417	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.8146
chr13	99083153	99083185	protein_coding	Btf3	exon	ENSMUSG00000021660	ProperStrand	64	chr7	116663634	116663724	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.4017
chr11	6298713	6299508	protein_coding	Zmiz2	exon	ENSMUSG00000041164	ProperStrand	69	chr2	32818886	32818937	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-5.1984
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr16	18240811	18240842	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	1	-6.2432
chr16	91687011	91687110	protein_coding	Donson	intron	ENSMUSG00000022960	ProperStrand	9	chr6	32325945	32325962	protein_coding	Plxna4	intron	ENSMUSG00000029765	NonProperStrand	15	1	-19.5214
chr14	78321223	78321313	protein_coding	Epsti1	intron	ENSMUSG00000022014	NonProperStrand	8	chr7	87607236	87607326	protein_coding	Blm	intron	ENSMUSG00000030528	NonProperStrand	19	1	-18.7527
chr19	8963085	8963175	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	chr1	59749360	59749429	snoRNA	ENSMUSG00000077358_SNORD70	.	ENSMUSG00000077358	ProperStrand	63	1	-2.1938
chr5	74489202	74489314	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr12	106269284	106269547	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	10	-1.1703
chr14	56492696	56492712	lincRNA	Gm17588	exon	ENSMUSG00000090992	ProperStrand	6	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-12.4916
chr11	120680135	120680161	protein_coding	Fasn	exon	ENSMUSG00000025153	ProperStrand	298	chr6	85895881	85895897	protein_coding	Dusp11	utr3	ENSMUSG00000030002	ProperStrand	37	1	-11.0762
chr17	34089208	34090530	protein_coding	Rps18	intron	ENSMUSG00000008668	ProperStrand	111	chr16	23110828	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	9	-4.1191
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr4	139482924	139482940	lincRNA	4933427I22Rik	exon	ENSMUSG00000085928	ProperStrand	62	1	-8.6501
chr7	117285497	117285563	protein_coding	Wee1	exon	ENSMUSG00000031016	ProperStrand	5	chr19	8798503	8798528	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-10.3212
chr8	35153810	35153838	protein_coding	Dctn6	exon	ENSMUSG00000031516	ProperStrand	2	chr16	23110941	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr13	23392049	23392066	lincRNA	4930557F10Rik	intron	ENSMUSG00000085488	NonProperStrand	51	chr7	132795381	132797991	protein_coding	Gtf3c1	exon	ENSMUSG00000032777	ProperStrand	161	3	-inf
chr1	136859251	136859298	protein_coding	Ube2t	utr5	ENSMUSG00000026429	ProperStrand	12	chr10	120415378	120415423	protein_coding	Lemd3	exon	ENSMUSG00000048661	ProperStrand	32	1	-17.6497
chr17	66468411	66468427	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	chr9	15119967	15120033	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-3.9046
chr2	163451033	163451123	protein_coding	Serinc3	utr3	ENSMUSG00000017707	ProperStrand	28	chr14	33005156	33005236	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-5.4647
chr11	95539367	95539457	protein_coding	Phb	exon	ENSMUSG00000038845	ProperStrand	126	chr9	15119632	15119712	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	8	-14.5686
chr10	17443077	17443094	protein_coding	Cited2	utr5	ENSMUSG00000039910	ProperStrand	64	chr16	23111450	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.1714
chr17	34089217	34089378	protein_coding	Rps18	exon	ENSMUSG00000008668	ProperStrand	111	chr10	80643881	80643897	protein_coding	Eef2	exon	ENSMUSG00000034994	NonProperStrand	20	1	-14.3054
chrX	136242613	136242631	protein_coding	Tbc1d8b	intron	ENSMUSG00000042473	NonProperStrand	27	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-9.3465
chr18	42460080	42500656	protein_coding	Rbm27	exon	ENSMUSG00000024491	ProperStrand	38	chr16	23110901	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.5894
chr4	47396746	47396811	protein_coding	Tgfbr1	exon	ENSMUSG00000007613	ProperStrand	22	chr7	52381719	52381760	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-9.5968
chr9	21543965	21544138	protein_coding	Ldlr	exon	ENSMUSG00000032193	ProperStrand	60	chr11	57873897	57873942	protein_coding	Larp1	utr3	ENSMUSG00000037331	ProperStrand	201	1	-10.8884
chr13	93458687	93458742	protein_coding	Serinc5	exon	ENSMUSG00000021703	ProperStrand	57	chr6	70794803	70794819	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	1	-11.5247
chr7	134160565	134160655	protein_coding	2900092E17Rik	utr5	ENSMUSG00000030680	ProperStrand	11	chr16	23110829	23110909	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.6241
chr15	25742387	25742431	protein_coding	Myo10	utr3	ENSMUSG00000022272	ProperStrand	168	chr1	193809361	193809377	protein_coding	Rd3	exon	ENSMUSG00000049353	ProperStrand	5	2	-19.3025
chr7	19663573	19665393	protein_coding	Dmwd	exon	ENSMUSG00000030410	ProperStrand	41	chr17	24857802	24857854	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-5.1342
chr17	13115667	13115783	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	chr10	39978372	39978485	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	4	-3.4565
chr19	5099674	5099764	protein_coding	Rab1b	utr3	ENSMUSG00000024870	ProperStrand	133	chr8	129468781	129468861	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	2	-5.0900
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr19	29678580	29678596	protein_coding	C030046E11Rik	exon	ENSMUSG00000038658	ProperStrand	104	1	-10.2656
chr11	119150275	119154141	protein_coding	Eif4a3	exon	ENSMUSG00000025580	ProperStrand	14	chr13	96374713	96374729	protein_coding	F2r	exon	ENSMUSG00000048376	NonProperStrand	88	1	-15.5139
chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	chr15	79910177	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	3	-0.8428
chr7	146764613	146764654	protein_coding	Inpp5a	utr3	ENSMUSG00000025477	ProperStrand	166	chr7	29136536	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-0.8752
chr9	120039637	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	chr6	125071779	125071879	snoRNA	ENSMUSG00000088208_SCARNA11	.	ENSMUSG00000088208	ProperStrand	113	1	-2.2143
chr1	165243148	165243164	protein_coding	Prrx1	utr5	ENSMUSG00000026586	NonProperStrand	28	chr5	121655098	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.2085
chr3	135268101	135268120	protein_coding	Nfkb1	exon	ENSMUSG00000028163	ProperStrand	55	chr9	15118325	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.6272
chr11	62224332	62224411	protein_coding	Ncor1	exon	ENSMUSG00000018501	ProperStrand	132	chr3	152450608	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	1	-7.2323
chr3	55987238	55987256	protein_coding	Nbea	utr5	ENSMUSG00000027799	NonProperStrand	115	chr4	95262136	95262152	protein_coding	Fggy	intron	ENSMUSG00000028573	ProperStrand	44	1	-12.6330
chr14	71015905	71017097	protein_coding	Epb4.9	exon	ENSMUSG00000022099	ProperStrand	48	chr12	104663677	104663695	protein_coding	Ddx24	intron	ENSMUSG00000041645	NonProperStrand	23	1	-15.6744
chr3	135268101	135268119	protein_coding	Nfkb1	exon	ENSMUSG00000028163	ProperStrand	55	chr18	35714252	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-3.6033
chr1	20794946	20798925	protein_coding	Mcm3	exon	ENSMUSG00000041859	ProperStrand	142	chr10	23505151	23505244	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-0.7602
chr18	13084430	13084530	protein_coding	Osbpl1a	intron	ENSMUSG00000044252	ProperStrand	39	chr4	131908689	131908755	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.8599
chr2	112204622	112204644	protein_coding	Tmem85	intron	ENSMUSG00000027131	ProperStrand	19	chr9	120039530	120039622	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-5.5217
chr17	32452683	32453285	protein_coding	Akap8	exon	ENSMUSG00000024045	ProperStrand	339	chr19	8963080	8963175	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	5	-2.4090
chr11	58120615	58120631	protein_coding	Zfp692	utr5	ENSMUSG00000037243	NonProperStrand	5	chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	1	-14.3502
chr18	39165985	39166094	protein_coding	Arhgap26	intron	ENSMUSG00000036452	ProperStrand	46	chr4	131908688	131908722	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.6050
chr5	66029855	66029871	protein_coding	Pds5a	exon	ENSMUSG00000029202	ProperStrand	62	chr11	6428074	6428164	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-5.3947
chr6	61130054	61130715	protein_coding	Fam190a	intron	ENSMUSG00000039578	ProperStrand	28	chr16	23111372	23111462	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.4504
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr13	46765144	46765160	protein_coding	C78339	exon	ENSMUSG00000069237	NonProperStrand	104	2	-5.8474
chr8	91555565	91555633	protein_coding	Sall1	exon	ENSMUSG00000031665	ProperStrand	96	chr4	15924617	15924663	protein_coding	Osgin2	utr3	ENSMUSG00000041153	ProperStrand	4	1	-17.9796
chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	chr5	77423244	77423679	protein_coding	Srp72	exon	ENSMUSG00000036323	ProperStrand	41	2	-16.3368
chr15	31520802	31522117	protein_coding	Cct5	exon	ENSMUSG00000022234	ProperStrand	116	chr10	90432659	90432681	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	4	-18.9719
chr3	136856024	136856041	LINE	L1_Mus4	L1	chr3L1_Mus4136855983	ProperStrand	8	chr16	23110527	23110564	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-6.3329
chr12	17552949	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr19	8799829	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	12	-2.8564
chr2	26493416	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr11	95634339	95634357	protein_coding	Zfp652	intron	ENSMUSG00000075595	NonProperStrand	8	1	-10.3032
chr11	69483134	69483236	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	chr12	110874223	110874291	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	2	-0.7375
chr12	101563795	101563872	protein_coding	Ttc7b	exon	ENSMUSG00000033530	ProperStrand	49	chr15	98350146	98350177	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-5.1527
chr15	82980100	82980226	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr5	74489568	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	5	-0.9043
chr10	77450854	77450934	protein_coding	Pfkl	utr3	ENSMUSG00000020277	ProperStrand	179	chr9	78326516	78326606	protein_coding	Eef1a1	utr3	ENSMUSG00000037742	ProperStrand	1990	1	-4.2171
chr9	108319753	108319769	protein_coding	Ccdc36	exon	ENSMUSG00000047220	ProperStrand	4	chr2	26494727	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-8.5876
chr14	20451772	20451789	LTR	IAPLTR3-int	ERVK	chr14IAPLTR3-int20447903	ProperStrand	44	chr15	79913303	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.1738
chr10	75322808	75322845	protein_coding	Mif	exon	ENSMUSG00000033307	ProperStrand	146	chr17	24857795	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-0.9809
chr11	115439253	115439336	protein_coding	Nup85	exon	ENSMUSG00000020739	ProperStrand	33	chr5	23358027	23358097	snoRNA	ENSMUSG00000093321_Snord93	.	ENSMUSG00000093321	ProperStrand	218	1	-11.9336
chr14	70972431	70972494	protein_coding	Hr	utr3	ENSMUSG00000022096	ProperStrand	7	chr2	30675197	30675213	protein_coding	Mettl11a	exon	ENSMUSG00000026857	ProperStrand	51	1	-18.0807
chr3	89891419	89891620	protein_coding	Tpm3	exon	ENSMUSG00000027940	ProperStrand	55	chr4	131908809	131908869	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.3443
chr7	150717298	150717348	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	chr9	64023228	64023273	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	4	-5.3488
chr19	23713726	23713743	protein_coding	1700028P14Rik	intron	ENSMUSG00000033053	NonProperStrand	11	chr19	8963137	8963183	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.4574
mmu-miR-6240	3	26	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr3	95464898	95464988	protein_coding	Mcl1	utr3	ENSMUSG00000038612	ProperStrand	75	1	-5.4666
chr13	73941724	73941824	protein_coding	Slc12a7	intron	ENSMUSG00000017756	ProperStrand	80	chr19	8798774	8798812	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-4.2511
chr9	78326643	78326795	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr2	130101266	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	2	-1.3285
chr7	31487603	31487693	SINE	B1_Mus1	Alu	chr7B1_Mus131487582	ProperStrand	1	chr7	31487461	31487541	SINE	ID_B1	B4	chr7ID_B131487356	ProperStrand	1	1	-inf
chr3	96440235	96440255	protein_coding	Pex11b	intron	ENSMUSG00000028102	NonProperStrand	4	chr11	97642959	97643079	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	4	-inf
chr7	148444077	148444133	protein_coding	Phrf1	exon	ENSMUSG00000038611	ProperStrand	86	chr5	147646740	147646830	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	10	-inf
chr11	97372833	97372849	protein_coding	Srcin1	utr3	ENSMUSG00000038453	NonProperStrand	21	chr5	130300420	130300495	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-10.7882
chr11	45723144	45723160	protein_coding	Clint1	utr3	ENSMUSG00000006169	NonProperStrand	273	chr13	23662761	23662868	protein_coding	Hist1h2ae	exon	ENSMUSG00000069272	ProperStrand	51	1	-10.6035
chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	chr2	32818839	32818939	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-1.4380
chr17	32453268	32453285	protein_coding	Akap8	exon	ENSMUSG00000024045	ProperStrand	339	chr11	6428035	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	4	-3.3080
chr11	62590600	62590630	snoRNA	ENSMUSG00000064692_SNORA67	.	ENSMUSG00000064692	ProperStrand	185	chr11	69483212	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-0.8082
chr6	85388849	85388866	protein_coding	Smyd5	exon	ENSMUSG00000033706	NonProperStrand	30	chr16	23111733	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.0878
chr6	29402892	29403209	protein_coding	Flnc	exon	ENSMUSG00000068699	ProperStrand	15	chr11	62416583	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-7.9356
chr4	43505797	43505825	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr7	148023622	148023673	protein_coding	1190003J15Rik	exon	ENSMUSG00000025481	ProperStrand	2	1	-10.3311
chr7	52582775	52582894	protein_coding	Trpm4	intron	ENSMUSG00000038260	ProperStrand	161	chr1	162968267	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-4.8853
chr7	29171540	29171558	protein_coding	Med29	utr3	ENSMUSG00000003444	NonProperStrand	134	chr7	152118581	152118597	protein_coding	Ccnd1	exon	ENSMUSG00000070348	ProperStrand	93	1	-10.8195
chr15	85889272	85889291	protein_coding	Gramd4	utr5	ENSMUSG00000035900	ProperStrand	39	chr7	86842610	86842676	protein_coding	5730590G19Rik	utr3	ENSMUSG00000046591	ProperStrand	45	1	-14.7488
chr10	39310472	39310489	antisense	Gm16365	.	ENSMUSG00000086915	NonProperStrand	12	chr16	23110828	23110871	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.4686
chr11	83254019	83254035	protein_coding	1700020L24Rik	exon	ENSMUSG00000035085	NonProperStrand	88	chr11	6428108	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.5174
chrX	93136011	93136027	protein_coding	Las1l	exon	ENSMUSG00000057421	ProperStrand	248	chr1	162968441	162968496	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-3.3717
chr5	111215435	111216173	protein_coding	Ulk1	exon	ENSMUSG00000029512	ProperStrand	92	chr4	131908811	131908891	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.7029
chr4	125853545	125855123	protein_coding	Thrap3	exon	ENSMUSG00000043962	ProperStrand	84	chrX	34622929	34623019	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-2.5771
chr7	138125771	138127181	protein_coding	Htra1	exon	ENSMUSG00000006205	ProperStrand	10	chr2	144156822	144156839	protein_coding	Ovol2	exon	ENSMUSG00000037279	NonProperStrand	8	2	-20.0801
chr4	80341307	80341325	LINE	Lx4A	L1	chr4Lx4A80340719	NonProperStrand	1	chr4	132280216	132280232	protein_coding	Eya3	utr3	ENSMUSG00000028886	NonProperStrand	9	1	-inf
chr2	49344311	49368735	protein_coding	Epc2	exon	ENSMUSG00000069495	ProperStrand	15	chr16	23111710	23111750	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-10.7873
chr17	10817537	10817554	protein_coding	Pacrg	intron	ENSMUSG00000037196	ProperStrand	6	chr4	131908356	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-5.6461
chr12	82602047	82602088	protein_coding	Synj2bp	utr3	ENSMUSG00000090935	ProperStrand	4	chr4	131908686	131908722	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-6.2660
chr5	115634062	115634162	protein_coding	Cabp1	intron	ENSMUSG00000029544	ProperStrand	8	chr3	123210854	123210890	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.8655
chr11	6428039	6428170	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr9	120037898	120038054	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	236	-inf
chr4	43505656	43505796	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr6	4908225	4908261	protein_coding	Ppp1r9a	intron	ENSMUSG00000032827	ProperStrand	50	6	-17.8000
chr9	111125772	111125852	protein_coding	Lrrfip2	exon	ENSMUSG00000032497	ProperStrand	28	chr19	8798743	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-6.2973
chr2	105012751	105012769	protein_coding	Wt1	utr3	ENSMUSG00000016458	NonProperStrand	338	chr10	23506279	23506347	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	2	-6.1149
chr13	3564925	3564973	protein_coding	Gdi2	utr3	ENSMUSG00000021218	ProperStrand	49	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-8.5851
chr11	5772291	5772381	protein_coding	Pold2	exon	ENSMUSG00000020471	ProperStrand	58	chr11	62416951	62416976	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-6.1100
chr11	5180669	5180685	protein_coding	Znrf3	utr3	ENSMUSG00000041961	NonProperStrand	210	chr3	95038370	95038429	protein_coding	Cdc42se1	utr3	ENSMUSG00000046722	ProperStrand	12	1	-14.0921
chr12	111799541	111799641	protein_coding	Ppp2r5c	exon	ENSMUSG00000017843	ProperStrand	36	chr16	23111447	23111499	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.0295
chr1	153270578	153270637	protein_coding	1200016B10Rik	intron	ENSMUSG00000052748	ProperStrand	16	chrX	34622942	34622960	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	4	-17.9240
chr10	53260875	53261344	protein_coding	Mcm9	exon	ENSMUSG00000058298	NonProperStrand	16	chr17	13112504	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	2	-11.6385
chr2	22444189	22445044	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	chr7	118219574	118219624	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	3	-1.0382
chr18	12306328	12306389	protein_coding	Riok3	intron	ENSMUSG00000024404	ProperStrand	38	chr11	62416630	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-6.0626
chr2	120359604	120359929	protein_coding	Zfp106	exon	ENSMUSG00000027288	ProperStrand	199	chr4	131865884	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-1.4488
chr2	48760556	48760572	protein_coding	Orc4	utr3	ENSMUSG00000026761	ProperStrand	95	chr4	131908357	131908410	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.8219
chr8	11217477	11217529	protein_coding	Col4a1	exon	ENSMUSG00000031502	ProperStrand	64	chr1	162966231	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-7.4473
chr4	125220597	125220613	protein_coding	Grik3	intron	ENSMUSG00000001985	ProperStrand	126	chr5	31364014	31364159	protein_coding	Cad	exon	ENSMUSG00000013629	ProperStrand	260	1	-8.8869
chr6	149256463	149256553	LTR	RLTR47_MM	ERV1	chr6RLTR47_MM149256167	ProperStrand	3	chr2	26493405	26493485	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-9.9740
chr4	131908382	131908453	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr1	152270736	152270753	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	2	-5.2383
chr12	17552045	17553096	protein_coding	Odc1	intron	ENSMUSG00000011179	ProperStrand	173	chr12	17552948	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	35	-inf
chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	chr17	35299506	35299599	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	2	-5.5750
chr9	120483246	120483336	protein_coding	Rpl14	exon	ENSMUSG00000025794	ProperStrand	123	chr10	90581054	90581134	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-3.4556
chrX	148205779	148205800	LINE	Lx8	L1	chrXLx8148205055	NonProperStrand	1	chr16	23110875	23110938	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr8	74446729	74446745	protein_coding	Zfp617	intron	ENSMUSG00000066880	NonProperStrand	208	1	-5.2903
chr8	11635142	11635197	protein_coding	Ankrd10	intron	ENSMUSG00000031508	ProperStrand	32	chr2	144087329	144087375	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	2	-12.4943
chr1	193733485	193733502	protein_coding	Slc30a1	exon	ENSMUSG00000037434	ProperStrand	42	chr9	15119632	15119699	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.2646
chrX	12863270	12864418	protein_coding	Ddx3x	exon	ENSMUSG00000000787	ProperStrand	67	chr11	97642990	97643070	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.2853
chr12	111891581	111891608	protein_coding	Dync1h1	intron	ENSMUSG00000018707	ProperStrand	648	chr7	148348875	148348904	protein_coding	Rnh1	exon	ENSMUSG00000038650	ProperStrand	12	1	-11.8311
chr8	77651253	77651329	protein_coding	Mcm5	utr3	ENSMUSG00000005410	ProperStrand	199	chr10	90581105	90581195	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	9	-20.1574
chr8	96696684	96696708	protein_coding	Mt2	utr5	ENSMUSG00000031762	ProperStrand	71	chr19	8963111	8963166	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-3.6179
chr11	35700931	35700955	protein_coding	Wwc1	intron	ENSMUSG00000018849	ProperStrand	52	chr7	29136525	29136595	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-4.5867
chr11	30019393	30019461	protein_coding	Spnb2	exon	ENSMUSG00000020315	ProperStrand	103	chr17	66468411	66468427	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	1	-8.7727
chr4	73979571	73979625	protein_coding	Kdm4c	exon	ENSMUSG00000028397	ProperStrand	36	chr7	134014568	134014661	protein_coding	Taok2	exon	ENSMUSG00000059981	ProperStrand	47	1	-14.8609
chr2	24825186	24827046	protein_coding	Wdr85	exon	ENSMUSG00000026975	ProperStrand	323	chr1	162966189	162966249	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-4.2901
chr9	50870096	50870112	protein_coding	Layn	intron	ENSMUSG00000060594	ProperStrand	7	chr19	8963026	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-6.3961
chr7	24779190	24779213	SINE	ID_B1	B4	chr7ID_B124779183	NonProperStrand	54	chr10	86221857	86221873	protein_coding	BC030307	exon	ENSMUSG00000044937	ProperStrand	77	1	-13.0260
chr7	28146782	28146798	protein_coding	Spnb4	exon	ENSMUSG00000011751	NonProperStrand	84	chr15	98350146	98350283	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-4.1190
chr7	118221574	118221674	protein_coding	Eif4g2	exon	ENSMUSG00000005610	ProperStrand	134	chr2	158182156	158182194	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-3.4845
chr11	93784526	93784589	protein_coding	Mbtd1	exon	ENSMUSG00000059474	ProperStrand	36	chr12	106269468	106269558	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-5.1229
chr2	166007296	166007386	LTR	MLT1F2	MaLR	chr2MLT1F2166007180	ProperStrand	1	chr2	166007617	166007707	SINE	B4	B4	chr2B4166007566	NonProperStrand	1	1	-inf
chr6	122267109	122267209	protein_coding	M6pr	utr3	ENSMUSG00000007458	ProperStrand	56	chr11	97642952	97643072	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	14	-22.0860
chr18	36897926	36898065	protein_coding	Tmco6	intron	ENSMUSG00000006850	NonProperStrand	2	chr11	116058162	116058179	protein_coding	Acox1	intron	ENSMUSG00000020777	ProperStrand	4	1	-inf
chr17	26168653	26168743	protein_coding	Rab11fip3	intron	ENSMUSG00000037098	ProperStrand	32	chr7	116663682	116663762	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.6411
chr15	72955639	72955739	protein_coding	Eif2c2	exon	ENSMUSG00000036698	ProperStrand	154	chr17	35088957	35089016	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-4.0525
chr4	43019764	43019827	protein_coding	Fancg	intron	ENSMUSG00000028453	ProperStrand	13	chr4	131908264	131908354	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.0703
chr8	126463036	126464965	protein_coding	Nup133	exon	ENSMUSG00000039509	ProperStrand	59	chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-7.8946
chr2	157119950	157120991	protein_coding	Rpn2	exon	ENSMUSG00000027642	ProperStrand	363	chr4	116827119	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	2	-6.0462
chr11	17846196	17846230	protein_coding	Etaa1	exon	ENSMUSG00000016984	ProperStrand	7	chr16	23111778	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.9463
chr5	42136455	42136473	Low_complexity	GA-rich	Low_complexity	chr5GA-rich42136449	NonProperStrand	106	chr2	84510232	84510249	protein_coding	2700094K13Rik	exon	ENSMUSG00000076437	NonProperStrand	1	1	-inf
chr17	35138357	35138457	protein_coding	Vars	utr5	ENSMUSG00000007029	ProperStrand	121	chr8	109400702	109400730	protein_coding	Has3	intron	ENSMUSG00000031910	NonProperStrand	2	1	-19.1467
chr10	58901362	58901379	protein_coding	Oit3	exon	ENSMUSG00000009654	NonProperStrand	11	chr11	48616643	48616706	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	2	-19.5387
chr15	99329179	99329195	protein_coding	Faim2	utr3	ENSMUSG00000023011	ProperStrand	45	chr1	162966818	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-6.8294
chr4	121379610	121379690	SINE	ID_B1	B4	chr4ID_B1121379598	NonProperStrand	1	chr17	50793026	50793116	protein_coding	Plcl2	intron	ENSMUSG00000038910	ProperStrand	10	1	-inf
chr19	44368798	44368874	protein_coding	Scd2	utr5	ENSMUSG00000025203	ProperStrand	219	chr7	148634769	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	5	-8.9396
chr18	36563899	36563984	protein_coding	Pfdn1	utr3	ENSMUSG00000024346	ProperStrand	12	chr5	34234245	34234262	protein_coding	Whsc1	utr5	ENSMUSG00000057406	ProperStrand	409	2	-19.6686
chr15	76736383	76736579	protein_coding	Rpl8	exon	ENSMUSG00000003970	ProperStrand	191	chr2	26768368	26768433	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-3.4020
chr17	47738725	47738766	protein_coding	Bysl	exon	ENSMUSG00000023988	ProperStrand	48	chr11	103256818	103256842	protein_coding	Plekhm1	intron	ENSMUSG00000034247	ProperStrand	23	1	-15.6744
chr10	40656453	40658046	protein_coding	Wasf1	exon	ENSMUSG00000019831	ProperStrand	12	chr7	29136525	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-12.8866
chr9	35024167	35024228	protein_coding	Srpr	utr3	ENSMUSG00000032042	ProperStrand	54	chr18	33954820	33954910	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-3.7005
chr5	117966078	117966096	protein_coding	Ksr2	intron	ENSMUSG00000061578	NonProperStrand	15	chr19	8798740	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	2	-12.1900
chr10	79256537	79256554	protein_coding	Palm	intron	ENSMUSG00000035863	ProperStrand	58	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.8207
chr3	103581495	103581511	antisense	Gm15886	.	ENSMUSG00000085754	ProperStrand	3	chr10	75322498	75322564	protein_coding	Mif	exon	ENSMUSG00000033307	ProperStrand	146	1	-18.0536
chr1	70167990	70168007	protein_coding	Spag16	intron	ENSMUSG00000053153	NonProperStrand	34	chr10	23505150	23505221	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.0925
chr16	18540540	18540574	protein_coding	Gnb1l	utr5	ENSMUSG00000000884	ProperStrand	25	chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	1	-9.8747
chr8	83332283	83332338	protein_coding	Gab1	intron	ENSMUSG00000031714	ProperStrand	72	chr7	29136628	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.0629
chr19	5609462	5609859	protein_coding	Kat5	exon	ENSMUSG00000024926	ProperStrand	20	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.3737
chr14	51427352	51427442	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr7	13516162	13516196	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	1	-2.7856
chr11	117634030	117634130	protein_coding	Tmc6	exon	ENSMUSG00000025572	ProperStrand	60	chr7	116664807	116664842	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.5488
chr2	154704260	154710060	protein_coding	Eif2s2	exon	ENSMUSG00000074656	ProperStrand	96	chr19	8963031	8963131	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-2.8653
chr18	38421732	38421748	protein_coding	0610009O20Rik	utr3	ENSMUSG00000024442	ProperStrand	25	chr17	24857715	24857779	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.8692
chr8	86535304	86535320	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	chr2	32818883	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-3.6855
chr9	50651193	50651260	protein_coding	Alg9	utr3	ENSMUSG00000032059	ProperStrand	16	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-10.4039
chr10	76725221	76725285	protein_coding	Pofut2	exon	ENSMUSG00000020260	ProperStrand	4	chr14	33062932	33062948	protein_coding	Parg	intron	ENSMUSG00000021911	NonProperStrand	2	1	-inf
chr8	112747325	112747394	protein_coding	Ftsjd1	utr3	ENSMUSG00000046441	ProperStrand	3	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-15.3235
chr13	24566654	24566679	protein_coding	Cmah	utr3	ENSMUSG00000016756	NonProperStrand	53	chr6	87769189	87769558	protein_coding	Isy1	exon	ENSMUSG00000030056	ProperStrand	172	1	-11.4499
chr4	137085113	137085296	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	chrX	71517889	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-1.7634
chr1	187028206	187028223	protein_coding	Rab3gap2	exon	ENSMUSG00000039318	ProperStrand	41	chr6	71832629	71832687	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-6.3618
chr6	145764118	145764134	protein_coding	Rassf8	exon	ENSMUSG00000030259	ProperStrand	23	chr2	146125209	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	1	-13.0097
chr8	13416896	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr17	30772308	30772324	protein_coding	Dnahc8	utr5	ENSMUSG00000033826	ProperStrand	246	1	-3.7371
chr11	102294590	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr8	74446729	74446745	protein_coding	Zfp617	intron	ENSMUSG00000066880	NonProperStrand	208	1	-6.4226
chr9	107800330	107800349	protein_coding	Mon1a	intron	ENSMUSG00000032583	ProperStrand	1	chr11	62418014	62418044	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-inf
chr8	12757418	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr11	60370927	60370943	protein_coding	Alkbh5	utr3	ENSMUSG00000042650	ProperStrand	203	2	-10.0067
chr2	167836658	167836685	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	chr2	130101266	130101310	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-5.4365
chr3	88684243	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr17	35299507	35299641	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	5	-2.6418
chr9	110100214	110141566	protein_coding	Smarcc1	utr3	ENSMUSG00000032481	ProperStrand	108	chr4	131908236	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-1.4269
chr18	20629777	20629793	protein_coding	Dsg4	exon	ENSMUSG00000001804	ProperStrand	2	chr16	23110967	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr4	131908236	131908439	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	chr3	153574588	153574655	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	14	-7.0409
chr19	30221664	30221716	protein_coding	Gldc	exon	ENSMUSG00000024827	ProperStrand	175	chr7	117189957	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	5	-8.2557
chr17	39979977	39980016	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr2	130101265	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	2	-2.2378
chr6	86671390	86672569	protein_coding	Gmcl1	exon	ENSMUSG00000001157	ProperStrand	17	chrX	34158688	34163632	protein_coding	Akap17b	exon	ENSMUSG00000059708	ProperStrand	14	10	-inf
chr5	21159308	21159359	protein_coding	Armc10	exon	ENSMUSG00000038525	ProperStrand	61	chr16	23111777	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-5.2559
chrX	34667269	34667285	protein_coding	Nkap	exon	ENSMUSG00000016409	NonProperStrand	133	chr7	4745758	4746042	protein_coding	Rpl28	exon	ENSMUSG00000030432	ProperStrand	220	1	-9.1120
chr7	52381973	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	chr14	31827516	31827545	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	3	-3.3168
chr2	127647589	127649721	protein_coding	Bub1	exon	ENSMUSG00000027379	ProperStrand	26	chr16	23110912	23111002	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.2392
chr7	108078134	108078214	protein_coding	Arhgef17	exon	ENSMUSG00000032875	ProperStrand	33	chr19	8963091	8963181	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.3267
chr2	26493364	26493498	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr7	29136525	29136654	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	68	-0.9998
chr5	54027281	54033273	protein_coding	Rbpj	exon	ENSMUSG00000039191	ProperStrand	96	chr7	52381722	52381756	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-6.6408
chr7	52563670	52563686	protein_coding	Trpm4	exon	ENSMUSG00000038260	NonProperStrand	3	chr11	106362568	106362635	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-13.7636
chr3	87718966	87719012	protein_coding	Hdgf	utr3	ENSMUSG00000004897	ProperStrand	117	chr4	122970448	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-6.0932
chr1	43553418	43553438	protein_coding	Nck2	intron	ENSMUSG00000066877	ProperStrand	21	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.5891
chr4	63240338	63240355	protein_coding	6330416G13Rik	intron	ENSMUSG00000045917	NonProperStrand	23	chr5	108334195	108334289	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-6.7107
chr11	97641452	97641573	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	chr4	131865489	131865509	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	5	-2.3002
chr7	133435525	133435589	protein_coding	Sbk1	exon	ENSMUSG00000042978	ProperStrand	24	chr1	89673617	89673717	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-5.0005
chr13	79659338	79659354	LTR	RodERV21-int	ERV1	chr13RodERV21-int79658190	ProperStrand	43	chr16	23111451	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.7472
chr15	82980099	82980189	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr4	56910503	56910617	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	2	-1.6337
chr8	13416893	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	4	-8.3175
chr13	112540780	112541440	protein_coding	Map3k1	exon	ENSMUSG00000021754	ProperStrand	113	chr8	123102928	123102968	protein_coding	Gse1	utr3	ENSMUSG00000031822	ProperStrand	97	1	-11.0769
chr13	74468772	74468792	protein_coding	Sdha	exon	ENSMUSG00000021577	ProperStrand	70	chr1	135147552	135147568	protein_coding	Plekha6	intron	ENSMUSG00000041757	NonProperStrand	40	1	-13.8234
chr2	32817352	32818097	protein_coding	Rpl12	exon	ENSMUSG00000038900	ProperStrand	167	chr17	35088957	35089014	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-3.9010
chr11	78338409	78338426	protein_coding	Tnfaip1	utr3	ENSMUSG00000017615	ProperStrand	30	chr10	119286688	119286704	protein_coding	Grip1	intron	ENSMUSG00000034813	ProperStrand	38	1	-15.6539
chr14	73023196	73023286	protein_coding	Fndc3a	intron	ENSMUSG00000033487	ProperStrand	84	chr7	117189925	117190005	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.7314
chr8	106942360	106942376	protein_coding	Dync1li2	utr3	ENSMUSG00000035770	ProperStrand	75	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-11.2365
chr12	111929507	111930981	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr3	123210854	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	8	-1.0010
chr11	40564374	40564464	protein_coding	Ccng1	exon	ENSMUSG00000020326	ProperStrand	30	chr9	15119648	15119728	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.8898
chr16	91227718	91227735	protein_coding	Olig2	utr3	ENSMUSG00000039830	NonProperStrand	78	chrX	152009278	152009294	protein_coding	Ptchd1	exon	ENSMUSG00000041552	NonProperStrand	294	1	-9.6014
chr6	51872316	51872332	protein_coding	Skap2	exon	ENSMUSG00000059182	NonProperStrand	34	chr7	150717305	150717405	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-6.6289
chr9	30915822	30915839	protein_coding	St14	exon	ENSMUSG00000031995	ProperStrand	90	chr9	103257639	103258648	protein_coding	Cdv3	exon	ENSMUSG00000032803	ProperStrand	68	1	-12.2470
chr15	12383817	12383907	protein_coding	Pdzd2	intron	ENSMUSG00000022197	NonProperStrand	16	chr4	116224216	116224296	protein_coding	Tmem69	utr3	ENSMUSG00000055900	ProperStrand	3	1	-inf
chr8	124124092	124124119	protein_coding	Zcchc14	utr3	ENSMUSG00000061410	ProperStrand	22	chr1	162965556	162967519	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.1855
chr5	5506670	5506760	protein_coding	Cldn12	utr3	ENSMUSG00000046798	NonProperStrand	1	chr5	6817260	6817340	protein_coding	Zfp804b	intron	ENSMUSG00000092094	ProperStrand	2	1	-inf
chr2	12257311	12257401	LTR	RLTR1B-int	ERV1	chr2RLTR1B-int12256716	NonProperStrand	1	chr2	12257531	12257621	LTR	RLTR1B	ERV1	chr2RLTR1B12257400	NonProperStrand	1	1	-inf
chr11	6428076	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr16	18240811	18240866	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	4	-2.1119
chr9	24307354	24307371	protein_coding	Dpy19l1	exon	ENSMUSG00000043067	ProperStrand	24	chr19	31005116	31005133	protein_coding	Prkg1	intron	ENSMUSG00000052920	ProperStrand	32	1	-16.4423
chr11	34330553	34330573	protein_coding	Dock2	intron	ENSMUSG00000020143	NonProperStrand	31	chr9	15119967	15120043	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-8.5774
chr11	28957327	28957417	LINE	L1Md_F2	L1	chr11L1Md_F228957284	ProperStrand	2	chr11	28957078	28957158	LTR	ORR1A2	MaLR	chr11ORR1A228956936	ProperStrand	1	1	-inf
chr13	107647337	107650952	protein_coding	Ipo11	exon	ENSMUSG00000042590	ProperStrand	120	chr1	162965978	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	4	-8.6386
chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	chr18	75161533	75161581	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-1.4179
chr11	54683798	54683871	protein_coding	Hint1	utr3	ENSMUSG00000020267	ProperStrand	11	chr16	23110536	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.6740
chr7	142907991	142908101	Simple_repeat	(CCCCG)n	Simple_repeat	chr7(CCCCG)n142908017	NonProperStrand	5	chr4	132530098	132530117	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	1	-14.7636
chr3	94690548	94690699	protein_coding	Psmb4	exon	ENSMUSG00000005779	ProperStrand	26	chr6	128384184	128384204	protein_coding	Fkbp4	intron	ENSMUSG00000030357	NonProperStrand	42	1	-15.7259
chr13	64467838	64467879	protein_coding	Ctsl	exon	ENSMUSG00000021477	ProperStrand	44	chr16	23111697	23111787	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	5	-11.4602
chr11	113730275	113731050	protein_coding	Sdk2	exon	ENSMUSG00000041592	NonProperStrand	98	chr3	123210871	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	7	-11.6661
chr15	36538127	36538264	protein_coding	Pabpc1	utr5	ENSMUSG00000022283	ProperStrand	908	chr4	109105596	109105613	protein_coding	Ttc39a	exon	ENSMUSG00000028555	ProperStrand	51	1	-8.2080
chr5	73488788	73489477	protein_coding	Fryl	exon	ENSMUSG00000070733	ProperStrand	173	chr19	8799856	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-2.9719
chr9	44598076	44598093	protein_coding	Ift46	intron	ENSMUSG00000002031	NonProperStrand	28	chr5	138606336	138607161	protein_coding	Mcm7	exon	ENSMUSG00000029730	ProperStrand	258	1	-11.9299
chr8	87579348	87579511	protein_coding	Tnpo2	utr3	ENSMUSG00000031691	ProperStrand	92	chr5	108336406	108336496	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-6.8180
chr11	62416577	62416598	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr11	77996559	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-2.0869
chr2	26493428	26493518	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr19	8799581	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	13	-18.7042
chr15	99329179	99329195	protein_coding	Faim2	utr3	ENSMUSG00000023011	ProperStrand	45	chr4	131908236	131908334	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.8531
chr8	108602970	108602989	protein_coding	Nfatc3	exon	ENSMUSG00000031902	ProperStrand	75	chr1	162966000	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-3.1952
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr2	121176333	121176349	protein_coding	Ppip5k1	exon	ENSMUSG00000033526	ProperStrand	85	1	-12.4519
chr11	102709297	102709377	protein_coding	Eftud2	exon	ENSMUSG00000020929	ProperStrand	86	chr9	15114421	15114834	protein_coding	Taf1d	exon	ENSMUSG00000031939	ProperStrand	363	1	-8.9854
chr5	138610593	138610679	protein_coding	Mcm7	exon	ENSMUSG00000029730	ProperStrand	258	chr9	40612831	40612878	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	1	-6.6401
chr15	98692965	98692982	protein_coding	Mll2	exon	ENSMUSG00000048154	NonProperStrand	20	chr17	24857800	24857852	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.2966
chr8	3600699	3600786	protein_coding	Camsap3	exon	ENSMUSG00000044433	ProperStrand	86	chr11	6428078	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.5568
chr4	82969577	82969595	protein_coding	Ttc39b	intron	ENSMUSG00000038172	NonProperStrand	12	chr4	131908809	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-6.7788
chr5	108336387	108336495	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	chr5	147646752	147646848	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	2	-1.2287
chr3	96132482	96132514	snRNA	ENSMUSG00000075978_U1	.	ENSMUSG00000075978	ProperStrand	132	chr11	68886933	68887019	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	2	-4.7220
chr1	168209715	168209732	protein_coding	Ildr2	intron	ENSMUSG00000040612	NonProperStrand	26	chr11	97643036	97643078	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.9888
chr1	58518064	58518116	protein_coding	Nif3l1	exon	ENSMUSG00000026036	ProperStrand	5	chr7	52165101	52171213	protein_coding	Ap2a1	exon	ENSMUSG00000060279	ProperStrand	193	1	-16.1390
chr5	121059685	121059703	protein_coding	1110008J03Rik	exon	ENSMUSG00000029600	ProperStrand	2	chr7	133920551	133920663	protein_coding	Ypel3	utr5	ENSMUSG00000042675	ProperStrand	2	1	-inf
chr17	88442322	88442409	protein_coding	Fbxo11	intron	ENSMUSG00000005371	ProperStrand	15	chr9	15119292	15119382	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-7.8763
chr7	28440063	28440107	protein_coding	Ttc9b	exon	ENSMUSG00000007944	ProperStrand	1	chr11	62416623	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-inf
chr18	60975968	60976068	protein_coding	Tcof1	utr3	ENSMUSG00000024613	ProperStrand	68	chr7	148634797	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-3.7519
chr4	30054265	30054355	LTR	ORR1C2	MaLR	chr4ORR1C230054201	ProperStrand	1	chr4	30054432	30054512	Simple_repeat	(CA)n	Simple_repeat	chr4(CA)n30054406	NonProperStrand	1	1	-inf
chr14	51427119	51427185	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chrX	151772723	151772823	protein_coding	Prdx4	exon	ENSMUSG00000025289	ProperStrand	29	1	-8.6681
chr10	60686592	60686636	protein_coding	Adamts14	intron	ENSMUSG00000059901	ProperStrand	17	chr16	23110962	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-3.4874
chr2	59915292	59915309	protein_coding	Baz2b	intron	ENSMUSG00000026987	NonProperStrand	12	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	1	-10.2938
chr16	91031116	91031206	protein_coding	Gcfc1	intron	ENSMUSG00000022974	ProperStrand	17	chr11	97643001	97643080	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.8122
chr11	69483136	69483247	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	chr13	23399497	23399532	tRNA	tRNA98-ValCAC	.	535435	ProperStrand	17	2	-7.9917
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	4	-0.7943
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr2	156138252	156138268	protein_coding	Scand1	utr5	ENSMUSG00000046229	ProperStrand	13	1	-11.8280
chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	chr19	5099975	5100013	protein_coding	Rab1b	utr3	ENSMUSG00000024870	ProperStrand	133	1	-7.6799
chr1	60098648	60098721	protein_coding	Ica1l	intron	ENSMUSG00000026018	NonProperStrand	2	chr11	77995191	77995237	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-13.6212
chr18	82662186	82662202	protein_coding	Mbp	intron	ENSMUSG00000041607	NonProperStrand	185	chr11	98878344	98878371	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-4.1076
chr2	158182155	158182297	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	chr3	95980313	95980410	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	4	-1.6099
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr2	165135753	165137168	protein_coding	Elmo2	exon	ENSMUSG00000017670	ProperStrand	14	1	-13.3721
chr18	35102297	35102358	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	chr1	9932607	9932626	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-1.5139
chr8	87366592	87366667	protein_coding	Calr	exon	ENSMUSG00000003814	ProperStrand	232	chr1	84718345	84718386	protein_coding	Trip12	utr3	ENSMUSG00000026219	ProperStrand	248	6	-18.7899
chr12	73285937	73285953	protein_coding	4930403N07Rik	exon	ENSMUSG00000021086	NonProperStrand	10	chr8	98269959	98270002	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-9.1627
chr16	35381578	35381668	LINE	L1MC4a	L1	chr16L1MC4a35381581	NonProperStrand	1	chr16	35381357	35381437	LTR	ORR1A4	MaLR	chr16ORR1A435381272	NonProperStrand	1	1	-inf
chr18	80327038	80327094	protein_coding	Adnp2	exon	ENSMUSG00000053950	ProperStrand	36	chr1	162965562	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.2292
chr3	88512761	88512851	protein_coding	2810403A07Rik	exon	ENSMUSG00000028060	ProperStrand	22	chr10	23505187	23505267	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.8416
chr3	129686399	129686499	protein_coding	Sec24b	utr3	ENSMUSG00000001052	ProperStrand	26	chr5	124567367	124567389	protein_coding	Arl6ip4	exon	ENSMUSG00000029404	ProperStrand	29	5	-inf
chr2	125157590	125157607	protein_coding	Fbn1	intron	ENSMUSG00000027204	NonProperStrand	32	chr6	71832629	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-6.8557
chr2	105012751	105012769	protein_coding	Wt1	utr3	ENSMUSG00000016458	NonProperStrand	338	chr7	117190025	117190058	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-0.6982
chr4	53015201	53015217	SINE	B1F1	Alu	chr4B1F153015138	ProperStrand	102	chr4	131865858	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.0181
chr6	85593216	85601295	protein_coding	Alms1	exon	ENSMUSG00000063810	ProperStrand	37	chr11	62416999	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	5	-inf
chr13	9833563	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chrX	101157889	101157971	protein_coding	Rlim	exon	ENSMUSG00000056537	ProperStrand	38	1	-5.8476
chr6	113660147	113660762	protein_coding	Tatdn2	utr3	ENSMUSG00000056952	ProperStrand	24	chr16	23110554	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-10.1242
chr7	35216701	35216718	LINE	L1M4b	L1	chr7L1M4b35216550	ProperStrand	31	chr19	8798740	8798761	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-6.0946
chr19	47180847	47180865	protein_coding	Pdcd11	exon	ENSMUSG00000025047	ProperStrand	137	chr2	26494763	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.7205
chr8	109896143	109896243	protein_coding	Nfat5	utr3	ENSMUSG00000003847	ProperStrand	29	chr8	70025305	70025322	protein_coding	Nat2	exon	ENSMUSG00000051147	ProperStrand	1	1	-inf
chr4	57963751	57964729	protein_coding	Txn1	exon	ENSMUSG00000028367	ProperStrand	31	chr15	98356822	98356912	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	1	-9.0809
chr16	5247135	5247161	protein_coding	Fam86	intron	ENSMUSG00000022544	NonProperStrand	1	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	1	-inf
chr4	117317930	117317956	protein_coding	Eri3	intron	ENSMUSG00000033423	ProperStrand	246	chr7	52085155	52085209	protein_coding	Nup62	exon	ENSMUSG00000043858	ProperStrand	47	1	-10.9766
chr15	101926861	101926951	protein_coding	Eif4b	utr3	ENSMUSG00000058655	ProperStrand	484	chr17	24856649	24856729	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-2.5060
chr19	6315250	6315702	protein_coding	Cdc42bpg	exon	ENSMUSG00000024769	ProperStrand	90	chr19	8963022	8963064	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.6294
chr9	48013215	48013232	LINE	L1M2	L1	chr9L1M248012984	NonProperStrand	34	chr14	76247712	76247768	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-5.2673
chr4	155386231	155386268	protein_coding	Sdf4	utr3	ENSMUSG00000029076	ProperStrand	20	chr15	98350216	98350263	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-6.9313
chr19	47150313	47150330	protein_coding	Taf5	exon	ENSMUSG00000025049	NonProperStrand	2	chr10	85355167	85355217	protein_coding	Prdm4	utr3	ENSMUSG00000035529	ProperStrand	11	2	-inf
chr2	153050783	153050799	protein_coding	Tspyl3	exon	ENSMUSG00000074671	ProperStrand	228	chr2	26494708	26494759	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-1.9890
chr11	79267696	79272364	protein_coding	Nf1	exon	ENSMUSG00000020716	ProperStrand	42	chr9	15119722	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.2646
chr13	73398342	73398361	protein_coding	Irx4	intron	ENSMUSG00000021604	ProperStrand	3	chr16	23110829	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-9.5778
chr1	153740886	153740977	protein_coding	1700025G04Rik	intron	ENSMUSG00000032666	ProperStrand	25	chr1	164659324	164659414	protein_coding	Prrc2c	intron	ENSMUSG00000040225	NonProperStrand	5	1	-19.0018
chr2	8759556	8759573	LINE	Lx	L1	chr2Lx8759488	ProperStrand	36	chr1	72758258	72758277	protein_coding	Rpl37a	exon	ENSMUSG00000046330	ProperStrand	94	1	-13.4437
chr15	103170286	103170305	protein_coding	Zfp385a	intron	ENSMUSG00000000552	NonProperStrand	1	chr3	88497900	88497983	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-inf
chr16	4767418	4767486	protein_coding	5730403B10Rik	utr3	ENSMUSG00000004071	ProperStrand	5	chr16	23110986	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr1	194893150	194893174	SINE	MIRb	MIR	chr1MIRb194893144	ProperStrand	1	chr18	35716697	35716761	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-inf
chr4	86500814	86500856	protein_coding	Rps6	exon	ENSMUSG00000028495	ProperStrand	263	chr11	61221429	61221452	tRNA	tRNA1880-TrpCCA	.	1495225	ProperStrand	8	1	-14.4846
chr2	26250545	26250635	protein_coding	Pmpca	exon	ENSMUSG00000026926	ProperStrand	45	chr11	6428085	6428165	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.7211
chr2	118456735	118457515	protein_coding	Bub1b	exon	ENSMUSG00000040084	ProperStrand	45	chr1	88247743	88247766	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-5.6588
chr13	52742450	52742466	protein_coding	Syk	utr3	ENSMUSG00000021457	NonProperStrand	125	chr11	62416599	62416653	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-3.7691
chr12	110881087	110881114	lincRNA	Rian	intron	ENSMUSG00000091793	ProperStrand	612	chr1	171881708	171881824	protein_coding	Hsd17b7	utr3	ENSMUSG00000026675	ProperStrand	4	1	-14.3432
chr10	59540199	59540215	protein_coding	Ascc1	intron	ENSMUSG00000044475	ProperStrand	18	chr5	108334195	108334264	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-7.2063
chr7	52378235	52378539	protein_coding	Rps11	exon	ENSMUSG00000003429	ProperStrand	49	chr11	68887044	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-4.5298
chr19	45126942	45128167	protein_coding	Sfxn3	exon	ENSMUSG00000025212	NonProperStrand	22	chr17	35089182	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-7.4817
chr15	8085886	8086679	protein_coding	Nup155	exon	ENSMUSG00000022142	ProperStrand	91	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	3	-7.3122
chr2	129034888	129034924	protein_coding	Slc20a1	exon	ENSMUSG00000027397	ProperStrand	81	chr16	23111451	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-2.9079
chr7	17502956	17503002	protein_coding	Calm3	exon	ENSMUSG00000019370	ProperStrand	28	chrX	71589884	71589905	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	1	-11.6893
chr9	99018527	99018590	protein_coding	Pik3cb	intron	ENSMUSG00000032462	ProperStrand	48	chr3	152450609	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	1	-9.2526
chr9	78023109	78023187	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr11	62707805	62707830	protein_coding	Fam18b	utr3	ENSMUSG00000014177	ProperStrand	23	4	-19.7221
chr14	80262508	80262525	lincRNA	Gm6999	intron	ENSMUSG00000075495	ProperStrand	265	chr8	96556354	96560711	protein_coding	Nudt21	exon	ENSMUSG00000031754	ProperStrand	33	3	-18.9243
chr3	14607196	14607212	protein_coding	1810022K09Rik	exon	ENSMUSG00000078784	ProperStrand	1	chr16	23110909	23110999	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr15	10406301	10406576	protein_coding	Brix1	exon	ENSMUSG00000022247	ProperStrand	32	chr11	6428034	6428119	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	4	-14.0752
chr7	140906607	140908545	protein_coding	Bccip	exon	ENSMUSG00000030983	ProperStrand	19	chr10	23505168	23505258	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.1073
chr7	134416678	134416787	protein_coding	Sephs2	exon	ENSMUSG00000049091	ProperStrand	15	chr2	26493363	26493419	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-6.4501
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr19	8798740	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	4	-2.7259
chr14	22487805	22487873	protein_coding	Myst4	exon	ENSMUSG00000021767	ProperStrand	151	chr1	162967515	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-1.8845
chr7	16820195	16820212	protein_coding	Gpr77	utr3	ENSMUSG00000074361	ProperStrand	8	chr14	76247753	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-13.2791
chr4	154960901	154960925	protein_coding	Nadk	exon	ENSMUSG00000029063	ProperStrand	25	chr1	162965534	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-8.1837
chr7	111376815	111379256	protein_coding	Trim6	exon	ENSMUSG00000072244	ProperStrand	40	chr9	15119650	15119730	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.3539
chr7	54110719	54110799	protein_coding	Ldha	utr3	ENSMUSG00000063229	ProperStrand	280	chr9	120039564	120039654	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-1.8056
chr13	51340020	51340039	DNA	URR1B	MER1_type	chr13URR1B51339874	NonProperStrand	1	mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	1	-inf
mmu-miR-5100	5	20	miRNA	mmu-miR-5100	.	mmu-miR-5100	ProperStrand	132	chr7	116663633	116663749	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.2795
chr7	16524518	16531244	protein_coding	Gltscr2	exon	ENSMUSG00000041560	ProperStrand	127	chr2	26493381	26493482	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-4.2509
chr12	102183104	102183194	protein_coding	Ccdc88c	exon	ENSMUSG00000021182	ProperStrand	151	chr11	97642957	97643037	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.0694
chr11	74239454	74239475	protein_coding	Rap1gap2	exon	ENSMUSG00000038807	ProperStrand	15	chr5	121655025	121655125	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-6.4555
chr1	190267301	190267317	protein_coding	Ush2a	exon	ENSMUSG00000026609	NonProperStrand	60	chr6	71832629	71832687	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-5.6110
chr7	52714020	52715079	protein_coding	Ftl1	exon	ENSMUSG00000050708	ProperStrand	807	chr10	110918577	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	9	-5.2860
chr1	154677539	154677555	protein_coding	Ncf2	exon	ENSMUSG00000026480	ProperStrand	12	chr4	131908809	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.9639
chr1	94955444	94956820	protein_coding	Kif1a	exon	ENSMUSG00000014602	ProperStrand	18	chr19	8800375	8800465	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-5.8558
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr4	132621612	132621712	protein_coding	Ahdc1	exon	ENSMUSG00000037692	ProperStrand	100	2	-6.6871
chr2	90235302	90235345	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	15120941	15121008	snoRNA	ENSMUSG00000065265_SNORA32	.	ENSMUSG00000065265	ProperStrand	101	2	-5.9301
chr9	96233428	96233521	protein_coding	Atp1b3	utr3	ENSMUSG00000032412	ProperStrand	20	chr13	22011134	22011168	tRNA	tRNA86-SerAGA	.	1850842	ProperStrand	33	3	-19.3149
chr9	62225633	62225652	protein_coding	Anp32a	utr3	ENSMUSG00000032249	ProperStrand	75	chr17	34019152	34019201	protein_coding	Kifc1	exon	ENSMUSG00000079553	ProperStrand	47	1	-13.3615
chr6	56711378	56711468	protein_coding	Avl9	utr3	ENSMUSG00000029787	ProperStrand	21	chr18	35714145	35714225	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-5.4554
chr15	81110991	81111009	SINE	ID4	ID	chr15ID481110956	ProperStrand	272	chr8	73419683	73419742	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-0.8134
chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	chr19	8963027	8963085	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-0.9496
chr7	13516163	13516199	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr11	51551274	51551380	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	1	-3.2245
chr9	65049531	65049602	snRNA	ENSMUSG00000075930_U5	.	ENSMUSG00000075930	ProperStrand	175	chr5	130295456	130295494	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	4	-10.9209
chr5	143666327	143666415	protein_coding	Actb	exon	ENSMUSG00000029580	ProperStrand	446	chr2	32818890	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	3	-5.1231
chr15	31523987	31524125	protein_coding	Cct5	exon	ENSMUSG00000022234	ProperStrand	116	chr16	57391756	57391793	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	2	-10.4793
chr9	120038343	120040198	protein_coding	Rpsa	intron	ENSMUSG00000032518	ProperStrand	398	chr4	131908236	131908410	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	13	-5.3650
chr17	29236779	29236884	protein_coding	Cdkn1a	utr3	ENSMUSG00000023067	ProperStrand	25	chr19	5875120	5875166	protein_coding	Frmd8	utr5	ENSMUSG00000024816	ProperStrand	7	1	-20.1995
chr9	106364965	106365498	protein_coding	Pcbp4	exon	ENSMUSG00000023495	ProperStrand	36	chr11	55296241	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-7.1954
chrX	88166817	88166907	LINE	Lx9	L1	chrXLx988166529	NonProperStrand	1	chr2	121748108	121748188	protein_coding	Casc4	intron	ENSMUSG00000060227	ProperStrand	18	1	-inf
chr5	115172114	115172151	protein_coding	Tchp	utr3	ENSMUSG00000002486	ProperStrand	19	chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	1	-11.8197
chr1	183042830	183042860	protein_coding	Nvl	intron	ENSMUSG00000026516	ProperStrand	89	chr4	131908812	131908891	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-2.5581
chr7	117189896	117190064	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	chr7	150717298	150717426	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	28	-7.0874
chr19	8798484	8798511	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	chr11	51551280	51551374	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	3	-2.2053
chr9	79641192	79641209	protein_coding	Tmem30a	utr5	ENSMUSG00000032328	NonProperStrand	2	chr17	46937534	46937551	protein_coding	BC032203	utr3	ENSMUSG00000036568	ProperStrand	64	1	-21.7207
chr11	46361948	46363881	lincRNA	Gm12171	exon	ENSMUSG00000086981	NonProperStrand	1	mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	1	-inf
chr9	108586802	108586831	protein_coding	Slc25a20	utr3	ENSMUSG00000032602	ProperStrand	5	chr5	121655016	121655100	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-8.7807
chr3	105762444	105762461	protein_coding	Wdr77	utr5	ENSMUSG00000000561	ProperStrand	15	chr9	24549590	24549632	protein_coding	Tbx20	intron	ENSMUSG00000031965	NonProperStrand	110	2	-inf
chr5	30091060	30092074	protein_coding	Dnajb6	exon	ENSMUSG00000029131	ProperStrand	81	chr4	131908687	131908721	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.8446
chr7	134007915	134007948	protein_coding	Hirip3	exon	ENSMUSG00000042606	ProperStrand	28	chr1	24620810	24620936	protein_coding	Gm10925	utr3	ENSMUSG00000090378	ProperStrand	320	13	-21.1349
chr19	47807161	47807191	protein_coding	Sfr1	exon	ENSMUSG00000025066	ProperStrand	15	chr6	125071843	125071878	snoRNA	ENSMUSG00000088208_SCARNA11	.	ENSMUSG00000088208	ProperStrand	113	1	-14.8768
chr12	21404165	21404210	protein_coding	Ywhaq	exon	ENSMUSG00000076432	ProperStrand	70	chr10	23505190	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-4.7717
chr2	3245748	3245781	protein_coding	Nmt2	utr3	ENSMUSG00000026643	NonProperStrand	6	chr1	162965529	162965587	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	4	-19.1037
chr10	59352882	59353603	protein_coding	Dnajb12	exon	ENSMUSG00000020109	ProperStrand	27	chr7	29136575	29136655	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	18	-21.0659
chr12	102956633	102956650	protein_coding	Tc2n	utr5	ENSMUSG00000021187	ProperStrand	32	chr2	26493426	26493499	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-4.9420
chr2	32072834	32072854	protein_coding	Prrc2b	exon	ENSMUSG00000039262	ProperStrand	344	chr4	132394374	132394418	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	1	-5.6778
chr4	129992465	129992519	protein_coding	Fabp3	utr3	ENSMUSG00000028773	ProperStrand	93	chr17	13115722	13115786	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	3	-15.1313
chr7	74189892	74189909	protein_coding	Adamts17	intron	ENSMUSG00000058145	NonProperStrand	73	chr4	131908810	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.9692
chr13	50202734	50202750	LTR	RLTRETN_Mm	ERVK	chr13RLTRETN_Mm50202624	ProperStrand	3	chr11	6428060	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-inf
chrX	130597232	130600830	protein_coding	Cstf2	exon	ENSMUSG00000031256	ProperStrand	26	chr16	23110986	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-3.8812
chr2	79590511	79590528	protein_coding	Ppp1r1c	intron	ENSMUSG00000034683	NonProperStrand	2	chr4	131865866	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-8.7800
chr14	47860896	47860914	protein_coding	Wdhd1	utr3	ENSMUSG00000037572	NonProperStrand	3	chr15	34370586	34370665	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-9.7644
chr6	42300274	42300292	protein_coding	Zyx	exon	ENSMUSG00000029860	ProperStrand	9	chr9	62729789	62729874	protein_coding	Pias1	exon	ENSMUSG00000032405	ProperStrand	13	1	-19.2772
chr4	147939346	147939363	protein_coding	Exosc10	exon	ENSMUSG00000017264	ProperStrand	20	chr6	115757992	115758131	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-7.6615
chr12	103214608	103214688	protein_coding	Cpsf2	intron	ENSMUSG00000041781	ProperStrand	9	chr11	77995191	77995255	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-10.0406
chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	chr11	62416600	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-6.1419
chr2	90235294	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	41673405	41673421	protein_coding	Il11ra1	intron	ENSMUSG00000073889	ProperStrand	128	3	-7.7594
chr9	15119968	15120030	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	chr11	77996557	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	4	-4.1413
chr3	33713610	33713626	protein_coding	Ccdc39	exon	ENSMUSG00000027676	ProperStrand	106	chr19	8799022	8799047	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-4.7271
chr17	26204770	26204811	protein_coding	Rab11fip3	exon	ENSMUSG00000037098	ProperStrand	32	chrX	103395636	103397838	protein_coding	Pgk1	exon	ENSMUSG00000062070	ProperStrand	484	1	-10.4010
chr14	105686932	105691474	protein_coding	Ndfip2	exon	ENSMUSG00000053253	ProperStrand	11	chr5	130295450	130295530	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-8.6618
chr2	180436671	180436688	protein_coding	Dido1	utr5	ENSMUSG00000038914	NonProperStrand	4	chr18	35716733	35716823	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-12.5455
chr12	17555232	17555372	protein_coding	Odc1	exon	ENSMUSG00000011179	ProperStrand	173	chr7	149837364	149837380	protein_coding	Igf2	utr3	ENSMUSG00000048583	ProperStrand	3	1	-17.7628
chr11	118900007	118900023	protein_coding	Cbx8	exon	ENSMUSG00000025578	ProperStrand	95	chr16	23110530	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.7158
chr7	117235433	117236592	protein_coding	Zfp143	utr3	ENSMUSG00000061079	ProperStrand	4	chrX	34622922	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-14.2816
chr19	46022236	46022252	protein_coding	9130011E15Rik	intron	ENSMUSG00000039901	ProperStrand	129	chr9	15119631	15119698	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.4080
chr13	23830944	23831020	protein_coding	Hist1h1c	exon	ENSMUSG00000036181	ProperStrand	99	chr10	90581049	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-3.8565
chr2	28681948	28682001	protein_coding	Gtf3c4	utr3	ENSMUSG00000035666	ProperStrand	14	chr9	15119291	15119381	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-8.0181
chr11	51433361	51433461	protein_coding	Nhp2	exon	ENSMUSG00000001056	ProperStrand	32	chr16	58465502	58465533	protein_coding	Dcbld2	exon	ENSMUSG00000035107	ProperStrand	56	1	-14.7209
chr11	79950546	79950563	protein_coding	1110002N22Rik	utr3	ENSMUSG00000046909	ProperStrand	45	chr2	130103751	130103797	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-9.0491
chr10	121242090	121244926	protein_coding	Srgap1	exon	ENSMUSG00000020121	NonProperStrand	80	chr11	106362303	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-5.2802
chr19	45225475	45225491	protein_coding	Tlx1	exon	ENSMUSG00000025215	NonProperStrand	12	chr2	109731084	109731103	protein_coding	Lin7c	intron	ENSMUSG00000027162	ProperStrand	15	1	-19.3113
chr9	78023108	78023170	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr8	96913272	96913318	protein_coding	Herpud1	exon	ENSMUSG00000031770	ProperStrand	10	1	-9.5070
chr1	152268927	152269668	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	chr15	79908958	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-1.5453
chr4	97812275	97812291	protein_coding	Nfia	intron	ENSMUSG00000028565	NonProperStrand	74	chr16	23110827	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-1.0172
chr19	8800381	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	chr1	162967784	162967806	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	1	-1.0576
chr13	58278423	58294755	protein_coding	Ubqln1	exon	ENSMUSG00000005312	ProperStrand	49	chr7	117189900	117190015	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-6.2817
chr4	132617377	132617409	protein_coding	Ahdc1	exon	ENSMUSG00000037692	ProperStrand	100	chr1	187066884	187066917	snoRNA	ENSMUSG00000077571_Snora36b	.	ENSMUSG00000077571	ProperStrand	244	1	-9.4757
chr13	90129393	90129463	protein_coding	Xrcc4	intron	ENSMUSG00000021615	ProperStrand	6	chr16	23110909	23110957	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.7876
chr4	43505681	43505728	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr9	21152537	21152816	protein_coding	Slc44a2	exon	ENSMUSG00000057193	ProperStrand	26	1	-4.6381
chr11	70779211	70779311	protein_coding	Nup88	exon	ENSMUSG00000040667	ProperStrand	17	chr4	131908236	131908296	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-12.2081
chr12	58331566	58331582	protein_coding	Mipol1	utr5	ENSMUSG00000047022	ProperStrand	40	chr1	162965531	162965591	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.0291
chr5	64730877	64730910	protein_coding	Tbc1d1	exon	ENSMUSG00000029174	ProperStrand	44	chr13	23714198	23714294	protein_coding	Hist1h1e	exon	ENSMUSG00000051627	ProperStrand	41	1	-14.7281
chr19	5104992	5105022	protein_coding	Rab1b	intron	ENSMUSG00000024870	ProperStrand	133	chr5	130295415	130295505	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-3.7327
chr2	156439525	156527112	protein_coding	Dlgap4	exon	ENSMUSG00000061689	ProperStrand	80	chr16	23110828	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-1.4613
chr19	53505858	53505876	LTR	RMER17B	ERVK	chr19RMER17B53505608	ProperStrand	1	chr19	8799579	8799644	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-inf
chr11	75316836	75316936	protein_coding	Prpf8	utr3	ENSMUSG00000020850	ProperStrand	255	chr7	118219574	118219616	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-1.6548
chr3	51144272	51144292	protein_coding	Elf2	intron	ENSMUSG00000037174	NonProperStrand	9	chr14	31827478	31827515	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-10.8146
chr2	129998658	129998715	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr17	14332660	14332710	protein_coding	Dact2	utr3	ENSMUSG00000048826	ProperStrand	8	1	-12.2409
chr2	162486508	162486530	protein_coding	Ptprt	intron	ENSMUSG00000053141	NonProperStrand	46	chr9	120038467	120038552	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.5226
chr10	126721963	126722039	protein_coding	Mbd6	exon	ENSMUSG00000025409	ProperStrand	12	chrX	34622942	34623032	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-6.2898
chr15	12279432	12279469	protein_coding	Golph3	exon	ENSMUSG00000022200	ProperStrand	35	chr3	95411847	95411870	protein_coding	Golph3l	exon	ENSMUSG00000046519	ProperStrand	4	2	-inf
chr11	6295828	6296256	protein_coding	Zmiz2	exon	ENSMUSG00000041164	ProperStrand	69	chr1	162967535	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-3.2194
chr4	43505806	43505896	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr12	37040848	37040865	protein_coding	Sostdc1	utr5	ENSMUSG00000036169	NonProperStrand	13	4	-19.2004
chr7	26498799	26498842	protein_coding	Ccdc97	intron	ENSMUSG00000002608	ProperStrand	10	chr2	26493364	26493420	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-7.2843
chr8	27067728	27067749	protein_coding	Hgsnat	exon	ENSMUSG00000037260	ProperStrand	41	chr4	131908689	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-3.2839
chr4	55431652	55431668	lincRNA	Gm12505	exon	ENSMUSG00000087070	ProperStrand	447	chr9	25109094	25111337	protein_coding	Sept7	exon	ENSMUSG00000001833	ProperStrand	101	1	-8.2499
chr8	74446729	74446745	protein_coding	Zfp617	intron	ENSMUSG00000066880	NonProperStrand	208	chr7	152118628	152119947	protein_coding	Ccnd1	exon	ENSMUSG00000070348	ProperStrand	93	1	-9.9397
chr7	151029066	151033293	protein_coding	Dhcr7	exon	ENSMUSG00000058454	ProperStrand	30	chr4	131908689	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-6.2232
chr8	11218878	11312657	protein_coding	Col4a1	exon	ENSMUSG00000031502	ProperStrand	64	chr11	68887040	68887065	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	2	-6.7585
chr5	35956610	35956662	protein_coding	Acox3	intron	ENSMUSG00000029098	ProperStrand	12	chr16	23110828	23110890	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-9.5315
chr17	34077169	34077268	protein_coding	H2-Ke2	utr5	ENSMUSG00000024309	ProperStrand	8	chr8	72287170	72287188	protein_coding	Zfp866	utr3	ENSMUSG00000043090	NonProperStrand	134	1	-15.7958
chr7	117189867	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	chr1	88252836	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	11	-1.9456
chr14	87912387	87912403	protein_coding	Tdrd3	utr3	ENSMUSG00000022019	NonProperStrand	46	chr17	35089181	35089228	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-6.0071
chr6	90964077	90993674	protein_coding	Nup210	intron	ENSMUSG00000030091	ProperStrand	140	chr16	23110879	23111499	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	17	-19.4588
chr12	101623937	101624017	protein_coding	Ttc7b	intron	ENSMUSG00000033530	ProperStrand	49	chr11	116938628	116938718	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-6.5599
chr17	56608135	56608225	protein_coding	Ptprs	intron	ENSMUSG00000013236	ProperStrand	152	chr9	120037932	120038012	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-2.9787
chrX	91782899	91783039	protein_coding	Maged1	exon	ENSMUSG00000025151	ProperStrand	43	chr8	122758268	122758284	protein_coding	Gm20388	intron	ENSMUSG00000092329	NonProperStrand	203	1	-11.5408
chr13	24565399	24565421	protein_coding	Cmah	utr3	ENSMUSG00000016756	NonProperStrand	53	chr16	23110881	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-0.9890
chr10	27892625	27892644	protein_coding	Ptprk	intron	ENSMUSG00000019889	NonProperStrand	24	chr2	26493370	26493486	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-5.5073
chr19	10973490	10973590	protein_coding	Prpf19	exon	ENSMUSG00000024735	ProperStrand	75	chr7	116663712	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.1374
chr14	46000223	46000270	protein_coding	Gnpnat1	intron	ENSMUSG00000037722	ProperStrand	5	chr15	83378208	83378308	protein_coding	Mcat	exon	ENSMUSG00000048755	ProperStrand	7	1	-20.9134
chr10	119198457	119198474	protein_coding	Grip1	intron	ENSMUSG00000034813	ProperStrand	38	chr1	162966813	162966843	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-7.1668
chr7	109149178	109149224	protein_coding	Numa1	exon	ENSMUSG00000066306	ProperStrand	148	chr11	62416994	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-4.2962
chr3	87535134	87535714	protein_coding	Arhgef11	exon	ENSMUSG00000041977	ProperStrand	16	chr10	23505152	23505213	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-5.9181
chr5	136707644	136707661	protein_coding	Sh2b2	exon	ENSMUSG00000005057	NonProperStrand	101	chr8	11427556	11427572	protein_coding	Col4a2	exon	ENSMUSG00000031503	ProperStrand	74	1	-11.8461
chr1	57029015	57029031	antisense	9130024F11Rik	.	ENSMUSG00000087022	ProperStrand	3	chrX	34622991	34623037	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-9.3485
chr3	48078021	48078111	LINE	L1_Mus2	L1	chr3L1_Mus248077817	ProperStrand	1	chr3	48078177	48078267	SINE	B1_Mus1	Alu	chr3B1_Mus148078151	ProperStrand	1	1	-inf
chrX	150765543	150765559	LINE	L1_Mus2	L1	chrXL1_Mus2150765117	NonProperStrand	49	chr1	158571390	158571482	protein_coding	Abl2	exon	ENSMUSG00000026596	ProperStrand	37	1	-14.7003
chr7	148634712	148634802	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	chr5	23358027	23358098	snoRNA	ENSMUSG00000093321_Snord93	.	ENSMUSG00000093321	ProperStrand	218	1	-1.7437
chr5	122691914	122691930	protein_coding	Hvcn1	utr3	ENSMUSG00000064267	ProperStrand	182	chr19	8800355	8800405	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-1.6436
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr1	75484537	75484553	protein_coding	Obsl1	exon	ENSMUSG00000026211	NonProperStrand	192	1	-3.6762
chr4	108306326	108306346	protein_coding	Cc2d1b	utr3	ENSMUSG00000028582	ProperStrand	13	chr16	23111388	23111448	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.8569
chr3	157679213	157679293	protein_coding	Srsf11	intron	ENSMUSG00000055436	ProperStrand	46	chr4	132394366	132394456	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	1	-9.6721
chr18	57400307	57400324	protein_coding	Megf10	exon	ENSMUSG00000024593	ProperStrand	143	chr8	118230284	118230303	protein_coding	Maf	exon	ENSMUSG00000055435	ProperStrand	4	1	-17.1747
chrX	149817321	149817411	protein_coding	Klf8	exon	ENSMUSG00000041649	ProperStrand	7	chr4	131865378	131865468	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-8.3161
chr11	23281237	23281268	protein_coding	Usp34	exon	ENSMUSG00000056342	ProperStrand	68	chr1	88247743	88247776	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-4.8548
chr16	11121670	11121722	protein_coding	Txndc11	intron	ENSMUSG00000022498	ProperStrand	11	chr4	111289776	111289792	protein_coding	Agbl4	exon	ENSMUSG00000061298	NonProperStrand	33	2	-18.7383
chr11	6519810	6519934	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	chr11	6428054	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	43	-inf
chr10	80640617	80640839	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr2	75497691	75497708	protein_coding	Hnrnpa3	intron	ENSMUSG00000059005	ProperStrand	289	1	-3.1143
chr4	59508455	59508522	protein_coding	Rod1	intron	ENSMUSG00000028382	ProperStrand	52	chr16	23111373	23111463	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-2.7591
chr17	21102544	21102634	protein_coding	Ppp2r1a	utr3	ENSMUSG00000007564	ProperStrand	57	chr5	108334200	108334280	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-4.9190
chr10	79498820	79498938	protein_coding	Polr2e	utr3	ENSMUSG00000004667	ProperStrand	37	chr19	8963027	8963044	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.1181
chr10	76961044	76961075	protein_coding	1810008A18Rik	intron	ENSMUSG00000032977	ProperStrand	8	chr12	60235145	60235184	snoRNA	ENSMUSG00000077505_SNORA26	.	ENSMUSG00000077505	ProperStrand	82	1	-16.7448
chr11	78086787	78086944	protein_coding	2610507B11Rik	exon	ENSMUSG00000010277	ProperStrand	246	chr5	115939529	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-5.0885
chr7	20222964	20223011	protein_coding	Clptm1	exon	ENSMUSG00000002981	ProperStrand	109	chr5	130300512	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.5511
chr5	135468712	135468729	lincRNA	Wbscr25	exon	ENSMUSG00000054909	ProperStrand	6	chr17	35647314	35647345	protein_coding	Pou5f1	exon	ENSMUSG00000024406	ProperStrand	104	1	-16.9315
chr19	60844770	60858203	protein_coding	Eif3a	exon	ENSMUSG00000024991	ProperStrand	287	chr14	52829459	52829568	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	6	-19.4067
chr8	3642156	3642172	protein_coding	Stxbp2	intron	ENSMUSG00000004626	NonProperStrand	73	chr19	8963116	8963182	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.9543
chr11	43259977	43260077	protein_coding	Slu7	utr3	ENSMUSG00000020409	ProperStrand	7	chr4	131865916	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.7768
chr1	17562394	17562415	LINE	Lx	L1	chr1Lx17562006	ProperStrand	1	chr2	5971390	5971440	protein_coding	Upf2	exon	ENSMUSG00000043241	ProperStrand	21	1	-inf
chrX	12741978	12742471	protein_coding	Usp9x	exon	ENSMUSG00000031010	ProperStrand	174	chr1	87983864	87983944	snoRNA	ENSMUSG00000077274_SNORA26	.	ENSMUSG00000077274	ProperStrand	361	1	-7.5918
chr15	75895732	75896552	protein_coding	Scrib	exon	ENSMUSG00000022568	ProperStrand	154	chr9	45601955	45602045	protein_coding	Cep164	intron	ENSMUSG00000043987	ProperStrand	7	1	-15.8621
chr8	87525135	87525238	protein_coding	Hook2	exon	ENSMUSG00000052566	ProperStrand	204	chr19	8798484	8798519	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-5.0545
chr11	117018649	117018701	protein_coding	Sec14l1	utr3	ENSMUSG00000020823	ProperStrand	71	chr19	8969416	8969433	protein_coding	Ints5	exon	ENSMUSG00000071652	NonProperStrand	2	1	-inf
chr2	90857789	90857805	protein_coding	Celf1	utr3	ENSMUSG00000005506	NonProperStrand	28	chr4	43506575	43506621	protein_coding	Ccdc107	exon	ENSMUSG00000028461	ProperStrand	69	1	-14.5703
chr4	138857008	138857227	protein_coding	Pqlc2	exon	ENSMUSG00000028744	ProperStrand	5	chr5	121655027	121655117	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-8.7807
chrX	160860884	160860900	protein_coding	Piga	exon	ENSMUSG00000031381	ProperStrand	4	chr15	74390128	74390195	protein_coding	Bai1	intron	ENSMUSG00000034730	ProperStrand	22	1	-20.6761
chr2	61649856	61649873	protein_coding	Tbr1	exon	ENSMUSG00000035033	ProperStrand	9	chr4	149022082	149022171	protein_coding	Clstn1	utr3	ENSMUSG00000039953	ProperStrand	173	1	-15.0822
chr11	75123732	75123750	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr17	24857721	24857851	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	5	-3.5552
chr5	130295519	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	chr16	43886793	43886893	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	1	-0.8390
chr10	20155739	20155829	protein_coding	Pde7b	intron	ENSMUSG00000019990	ProperStrand	10	chr9	52965109	52965199	protein_coding	Ddx10	intron	ENSMUSG00000053289	NonProperStrand	5	1	-19.5370
chr7	104824674	104824774	protein_coding	Rsf1	exon	ENSMUSG00000035623	ProperStrand	48	chr4	131908236	131908286	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.7522
chr1	174492230	174492246	protein_coding	Vsig8	exon	ENSMUSG00000049598	ProperStrand	27	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-5.1289
chr13	101598967	101603145	protein_coding	Slc30a5	utr5	ENSMUSG00000021629	ProperStrand	12	chr9	83678799	83681879	protein_coding	Elovl4	exon	ENSMUSG00000032262	ProperStrand	159	1	-14.6447
chr12	88289017	88289034	protein_coding	2310044G17Rik	intron	ENSMUSG00000034157	ProperStrand	48	chr2	158451026	158451043	protein_coding	Actr5	exon	ENSMUSG00000037761	NonProperStrand	94	1	-12.8589
chr7	126118596	126118692	protein_coding	Gprc5b	utr3	ENSMUSG00000008734	ProperStrand	7	chr19	8799830	8799858	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	2	-14.9665
chr14	26532926	26532947	protein_coding	Zcchc24	utr3	ENSMUSG00000055538	ProperStrand	42	chr12	17552949	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-5.7868
chr11	22900884	22900949	protein_coding	Cct4	exon	ENSMUSG00000007739	ProperStrand	81	chr2	26494708	26494802	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.5783
chr9	78327131	78327176	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr2	26768050	26768119	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	1	-1.8221
chr9	86573791	86573868	protein_coding	Me1	exon	ENSMUSG00000032418	ProperStrand	12	chr16	23111372	23111450	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.0123
chr2	29925723	29925782	protein_coding	Set	exon	ENSMUSG00000054766	ProperStrand	167	chr11	69481335	69481415	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-1.5024
chr7	134007960	134008089	protein_coding	Hirip3	exon	ENSMUSG00000042606	ProperStrand	28	chr12	106269342	106269432	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-5.6168
chr11	45952378	45952426	protein_coding	Adam19	exon	ENSMUSG00000011256	ProperStrand	134	chr1	59540984	59541023	protein_coding	Fzd7	exon	ENSMUSG00000041075	ProperStrand	373	2	-12.8308
chr19	46144257	46145794	protein_coding	Pprc1	exon	ENSMUSG00000055491	ProperStrand	143	chr17	13112513	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	2	-5.1297
chr3	97386744	97386766	protein_coding	Chd1l	exon	ENSMUSG00000028089	ProperStrand	15	chr4	131908833	131908896	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.5353
chr8	107788605	107788621	protein_coding	Fbxl8	utr5	ENSMUSG00000033313	NonProperStrand	4	chrX	103395646	103397781	protein_coding	Pgk1	exon	ENSMUSG00000062070	ProperStrand	484	1	-14.8110
chr11	4079369	4079425	protein_coding	Sf3a1	exon	ENSMUSG00000002129	ProperStrand	78	chr18	33954883	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-3.0294
chr6	38461896	38461915	protein_coding	Ubn2	utr3	ENSMUSG00000038538	ProperStrand	86	chr2	26493363	26493487	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	4	-10.5756
chr1	95591030	95591074	protein_coding	Bok	intron	ENSMUSG00000026278	NonProperStrand	1	chr4	131908689	131908710	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-inf
chr17	45705502	45705881	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr13	22114287	22114336	tRNA	tRNA972-SerCGA	.	1575961	ProperStrand	7	1	-11.1351
chr12	85499931	85500619	protein_coding	C130039O16Rik	exon	ENSMUSG00000042507	ProperStrand	75	chr2	158205317	158205397	snoRNA	ENSMUSG00000064585_SNORA71	.	ENSMUSG00000064585	ProperStrand	418	1	-8.9783
chr7	148634702	148634792	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	chr17	71990923	71991000	snoRNA	ENSMUSG00000092713_CT010429.1	.	ENSMUSG00000092713	ProperStrand	182	10	-inf
chr2	158185569	158185666	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr12	110887828	110887893	snoRNA	ENSMUSG00000084549_SNORD113	.	ENSMUSG00000084549	ProperStrand	196	5	-16.9781
chr15	76005287	76005377	protein_coding	Plec	exon	ENSMUSG00000022565	ProperStrand	186	chr17	24857761	24857841	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-0.7023
chr7	148634659	148636930	protein_coding	Rplp2	exon	ENSMUSG00000025508	ProperStrand	106	chr2	91436284	91436336	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	3	-14.5386
chr5	24931852	24931897	protein_coding	Mll3	intron	ENSMUSG00000038056	ProperStrand	31	chr16	33726534	33726550	protein_coding	Heg1	exon	ENSMUSG00000075254	NonProperStrand	37	1	-15.6174
chr3	28705745	28706114	protein_coding	Rpl22l1	exon	ENSMUSG00000039221	ProperStrand	4	chr5	130300495	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-7.9077
chr8	87223595	87223612	protein_coding	Trmt1	exon	ENSMUSG00000001909	NonProperStrand	60	chr17	33966676	33975049	protein_coding	Ndufa7	exon	ENSMUSG00000041881	ProperStrand	64	1	-13.1827
chr11	3207669	3207769	protein_coding	Patz1	exon	ENSMUSG00000020453	ProperStrand	14	chr11	62416599	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-8.0774
chr4	151635003	151635046	protein_coding	Acot7	exon	ENSMUSG00000028937	ProperStrand	15	chr10	23505150	23505255	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.5481
chr8	98269959	98270011	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	chr1	162967746	162967806	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	1	-2.6859
chr9	88419023	88419041	SINE	B4	B4	chr9B488418988	ProperStrand	75	chr8	73109886	73109925	protein_coding	Ell	exon	ENSMUSG00000070002	ProperStrand	32	1	-14.1342
chr3	130431744	130432005	protein_coding	Rpl34	exon	ENSMUSG00000062006	ProperStrand	51	chr11	55296275	55296332	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-6.5014
chr18	35106161	35106251	protein_coding	Hspa9	exon	ENSMUSG00000024359	ProperStrand	166	chr11	116938557	116938637	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-4.1912
chr12	99492450	99494838	protein_coding	Galc	exon	ENSMUSG00000021003	ProperStrand	4	chr4	131865912	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.0048
chr5	74489215	74489234	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr11	97048977	97049077	protein_coding	Kpnb1	utr5	ENSMUSG00000001440	ProperStrand	197	1	-3.3646
chr6	37931895	37931985	LTR	RMER17B	ERVK	chr6RMER17B37931921	ProperStrand	1	chr7	116664812	116664892	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-inf
chr9	60696491	60719291	protein_coding	Uaca	exon	ENSMUSG00000034485	ProperStrand	109	chr17	24857717	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	9	-16.5390
chr1	168239525	168239541	protein_coding	Ildr2	exon	ENSMUSG00000040612	ProperStrand	103	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.6237
chr7	137915607	137915697	protein_coding	Etos1	exon	ENSMUSG00000050189	ProperStrand	1	chr7	116664837	116664917	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-inf
chr15	95804043	95804143	protein_coding	Ano6	utr3	ENSMUSG00000064210	ProperStrand	39	chr5	130300423	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	7	-20.0983
chr17	31610289	31610333	protein_coding	Pde9a	intron	ENSMUSG00000041119	ProperStrand	16	chr11	69481387	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-9.4384
chr2	90235315	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	90789698	90789716	protein_coding	Stard5	utr3	ENSMUSG00000046027	NonProperStrand	1	1	-inf
chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	chr11	62416574	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-1.7154
mmu-miR-6239	0	18	miRNA	mmu-miR-6239	.	mmu-miR-6239	ProperStrand	31	chr13	6583910	6585781	protein_coding	Pfkp	exon	ENSMUSG00000021196	ProperStrand	197	6	-19.1606
chr15	100311922	100311938	protein_coding	Csrnp2	utr3	ENSMUSG00000044636	NonProperStrand	60	chr4	131865855	131865880	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.7679
chr7	52377883	52378241	protein_coding	Rps11	exon	ENSMUSG00000003429	ProperStrand	49	chr16	23110841	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.1188
chr1	71698214	71699461	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr1	92724535	92724551	protein_coding	Col6a3	exon	ENSMUSG00000048126	ProperStrand	79	2	-11.6908
chr12	104004043	104004476	protein_coding	Ubr7	exon	ENSMUSG00000041712	ProperStrand	46	chr5	108332716	108332819	protein_coding	Rpl5	exon	ENSMUSG00000058558	ProperStrand	235	1	-11.1113
chrX	20246275	20246386	protein_coding	Uba1	exon	ENSMUSG00000001924	ProperStrand	156	chr17	39985128	39985152	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-4.0901
chr8	35002379	35002457	protein_coding	Rbpms	intron	ENSMUSG00000031586	ProperStrand	58	chr9	120039644	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	4	-11.4001
chr14	31832077	31832128	protein_coding	Gnl3	utr5	ENSMUSG00000042354	ProperStrand	53	chr2	26494708	26494800	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.3318
chr12	32011479	32011514	protein_coding	Lamb1	exon	ENSMUSG00000002900	ProperStrand	87	chr1	162966824	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-5.5295
chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	chr19	8963082	8963172	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	10	-12.1779
chr4	131908809	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	chr1	129271706	129271753	snoRNA	ENSMUSG00000065687_snoU6-53	.	ENSMUSG00000065687	ProperStrand	78	1	-0.8889
chr6	89287296	89290567	protein_coding	Plxna1	exon	ENSMUSG00000030084	ProperStrand	233	chr9	15069885	15069901	protein_coding	Med17	exon	ENSMUSG00000031935	ProperStrand	135	1	-8.9677
chr18	78019750	78019830	protein_coding	Atp5a1	exon	ENSMUSG00000025428	ProperStrand	254	chr1	87983884	87983974	snoRNA	ENSMUSG00000077274_SNORA26	.	ENSMUSG00000077274	ProperStrand	361	1	-6.8432
chr17	46663594	46814100	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr14	31827476	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	2	-5.2455
chr12	102191625	102192457	protein_coding	Ccdc88c	exon	ENSMUSG00000021182	ProperStrand	151	chr8	13416897	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-4.6559
chr3	133132307	133150350	protein_coding	Tet2	exon	ENSMUSG00000040943	ProperStrand	192	chr4	131908687	131908779	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-1.3254
chrX	131072535	131072608	protein_coding	Timm8a1	utr3	ENSMUSG00000048007	ProperStrand	6	chr5	108336405	108336490	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-9.5743
chr15	79910251	79913350	protein_coding	Rpl3	exon	ENSMUSG00000060036	ProperStrand	8342	chr11	55296195	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	14	-3.0259
chr14	22488202	22488252	protein_coding	Myst4	exon	ENSMUSG00000021767	ProperStrand	151	chr9	103950068	103950086	protein_coding	Uba5	intron	ENSMUSG00000032557	ProperStrand	111	1	-10.2257
chr5	3693225	3693242	protein_coding	Ankib1	exon	ENSMUSG00000040351	NonProperStrand	98	chr1	72272830	72272920	snRNA	ENSMUSG00000075752_U2	.	ENSMUSG00000075752	ProperStrand	535	2	-12.6934
chr9	57385425	57385441	protein_coding	2310046O06Rik	utr5	ENSMUSG00000032305	ProperStrand	135	chr9	120038610	120038675	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.6850
chr8	96334897	96334997	protein_coding	Gnao1	utr5	ENSMUSG00000031748	ProperStrand	7	chr4	131908236	131908297	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-5.3201
chr9	20695988	20696298	protein_coding	Ppan	exon	ENSMUSG00000004100	ProperStrand	65	chr11	69483190	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	4	-8.5268
chr6	128322002	128322018	protein_coding	Foxm1	exon	ENSMUSG00000001517	NonProperStrand	66	chr14	58417171	58417359	protein_coding	Sap18	exon	ENSMUSG00000021963	ProperStrand	9	1	-16.9461
chr2	164250737	164250802	protein_coding	Sdc4	utr3	ENSMUSG00000017009	ProperStrand	177	chr17	66468410	66468428	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	2	-12.2994
chr4	147320732	147320822	protein_coding	2510039O18Rik	utr3	ENSMUSG00000044496	ProperStrand	28	chr9	15118284	15118364	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-4.9141
chr5	121655016	121655154	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	chr9	64023228	64023334	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	4	-1.9988
chr1	155287305	155287354	snoRNA	ENSMUSG00000064435_SNORA4	.	ENSMUSG00000064435	ProperStrand	263	chr8	73419657	73419757	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-2.8254
chr5	130745228	130750500	protein_coding	Tyw1	exon	ENSMUSG00000056310	ProperStrand	32	chr16	23111448	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.2238
chr1	73997706	73997796	protein_coding	Tns1	intron	ENSMUSG00000055322	ProperStrand	63	chr7	116664819	116664899	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.4653
chr7	19722633	19722649	protein_coding	Fbxo46	utr3	ENSMUSG00000050428	NonProperStrand	24	chr5	130300472	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.1835
chr7	30231467	30231493	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	chr15	98350146	98350267	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-0.9996
chr13	110231347	110231365	protein_coding	Pde4d	intron	ENSMUSG00000021699	ProperStrand	92	chr19	11857619	11859888	protein_coding	Stx3	exon	ENSMUSG00000041488	ProperStrand	37	1	-13.4313
chr12	70259712	70260004	protein_coding	Rps29	exon	ENSMUSG00000034892	ProperStrand	124	chr17	35087897	35087942	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-3.8165
chr7	6204947	6204963	protein_coding	Gm6792	intron	ENSMUSG00000053367	NonProperStrand	6	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-8.2103
chr10	60692417	60692433	protein_coding	Adamts14	exon	ENSMUSG00000059901	NonProperStrand	127	chr3	123210928	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-0.9798
chr13	9833567	9833672	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr10	86158278	86158439	protein_coding	Hsp90b1	exon	ENSMUSG00000020048	ProperStrand	396	1	-1.6127
chr11	82689422	82689438	protein_coding	Rad51l3	intron	ENSMUSG00000018841	ProperStrand	112	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.9034
chr9	15119996	15120039	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	chr7	150717348	150717422	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	3	-2.0143
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr5	115939497	115939615	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-4.0266
chr1	72387064	72387154	protein_coding	Xrcc5	intron	ENSMUSG00000026187	ProperStrand	12	chr15	34370546	34370626	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-6.6995
chr16	20344820	20357468	protein_coding	Abcc5	exon	ENSMUSG00000022822	ProperStrand	30	chr3	95980361	95980410	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-8.2453
chr12	113054381	113054471	protein_coding	Zfyve21	intron	ENSMUSG00000021286	ProperStrand	16	chr10	23505200	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.4264
chr16	91793978	91801861	protein_coding	Itsn1	exon	ENSMUSG00000022957	ProperStrand	172	chr7	117166835	117166858	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	9	-19.8183
chr2	22945251	22945305	protein_coding	Acbd5	exon	ENSMUSG00000026781	ProperStrand	3	chr7	116664794	116664884	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-8.6415
chr11	101466285	101466351	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	chr1	145626058	145626137	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-4.4695
chr18	89387605	89387621	protein_coding	Cd226	intron	ENSMUSG00000034028	ProperStrand	47	chr10	23505222	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-2.9598
chr7	134671404	134671504	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	chr18	35102297	35102366	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	4	-6.4746
chr10	72437415	72437431	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr4	122535279	122535369	protein_coding	Ppt1	utr3	ENSMUSG00000028657	ProperStrand	8	1	-12.4484
chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	chr11	6428092	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-2.2290
chr4	43505733	43505823	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr2	125172096	125172112	protein_coding	Fbn1	exon	ENSMUSG00000027204	NonProperStrand	32	1	-4.2379
chr2	158185566	158185656	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr4	130305550	130305602	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	1	-3.2411
chrX	72214248	72214264	protein_coding-noncoding	Gab3	utr3	ENSMUSG00000032750	ProperStrand	420	chr17	24814560	24814896	protein_coding	Zfp598	exon	ENSMUSG00000041130	ProperStrand	26	1	-11.1063
chr6	64088282	64088301	protein_coding	Grid2	intron	ENSMUSG00000071424	NonProperStrand	76	chr18	35716696	35716723	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.7907
chr14	52821972	52822212	protein_coding	Chd8	exon	ENSMUSG00000053754	ProperStrand	167	chr8	73419683	73419783	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-1.4457
chr15	83210160	83212205	protein_coding	Pacsin2	exon	ENSMUSG00000016664	ProperStrand	30	chr11	59025807	59025895	protein_coding	Arf1	utr3	ENSMUSG00000048076	ProperStrand	52	1	-15.0025
chr5	116010825	116010925	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	chr18	35714215	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-0.9372
chr11	115883828	115883845	protein_coding	H3f3b	utr3	ENSMUSG00000016559	ProperStrand	76	chr11	70049038	70049054	protein_coding	0610010K14Rik	utr3	ENSMUSG00000020831	ProperStrand	16	1	-15.5197
chr9	25059948	25059964	protein_coding	Sept7	intron	ENSMUSG00000001833	ProperStrand	101	chr18	61857126	61857189	protein_coding	Pcyox1l	exon	ENSMUSG00000024579	ProperStrand	15	1	-15.0988
chr13	86296948	86297039	LINE	Lx3_Mus	L1	chr13Lx3_Mus86295718	NonProperStrand	1	chr2	19339986	19340076	LINE	Lx3C	L1	chr2Lx3C19338881	NonProperStrand	1	1	-inf
chr11	121534071	121534089	protein_coding	B3gntl1	intron	ENSMUSG00000046605	NonProperStrand	3	chr9	120039625	120039649	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-9.5119
chr15	79913288	79913343	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr9	114420612	114420712	protein_coding	Trim71	utr3	ENSMUSG00000079259	ProperStrand	162	2	-3.4104
chr5	34894211	34894227	protein_coding	Sh3bp2	utr5	ENSMUSG00000054520	ProperStrand	43	chr19	8798740	8798801	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-5.4488
chr17	4082653	4082743	LINE	L1Md_A	L1	chr17L1Md_A4082095	NonProperStrand	28	chr17	54691501	54691591	LINE	L1Md_T	L1	chr17L1Md_T54685511	NonProperStrand	1	1	-inf
chr3	145554674	145554723	protein_coding	Ddah1	utr3	ENSMUSG00000028194	ProperStrand	4	chr9	58703523	58703540	protein_coding	Hcn4	exon	ENSMUSG00000032338	NonProperStrand	19	1	-inf
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr17	23964458	23964510	protein_coding	Tceb2	exon	ENSMUSG00000055839	ProperStrand	12	1	-9.6262
chr14	121338729	121346064	protein_coding	Ipo5	exon	ENSMUSG00000030662	ProperStrand	135	chr4	131908687	131908807	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-0.8221
chr6	87931365	87931464	protein_coding	H1fx	utr5	ENSMUSG00000044927	ProperStrand	13	chr18	33954916	33954948	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-10.5963
mmu-miR-292a-3p	0	24	miRNA	mmu-miR-292a-3p	.	mmu-miR-292a-3p	ProperStrand	38	chr10	8605740	8605815	protein_coding	Sash1	utr5	ENSMUSG00000015305	ProperStrand	23	1	-16.1763
chr1	71672670	71672741	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr4	131826034	131826062	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	1	-3.8545
chr6	71341272	71341362	protein_coding	Rmnd5a	utr3	ENSMUSG00000002222	ProperStrand	38	chr19	8963087	8963167	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.0700
chr17	71776814	71776859	protein_coding	Smchd1	exon	ENSMUSG00000024054	ProperStrand	79	chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	1	-9.5223
chr5	113370707	113370723	protein_coding	Adrbk2	exon	ENSMUSG00000042249	ProperStrand	56	chr11	62416951	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-6.1792
chr19	27837820	27837836	protein_coding	Rfx3	utr3	ENSMUSG00000040929	ProperStrand	92	chr16	23111372	23111430	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.7306
chr5	100855902	100855972	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr16	62885343	62885362	protein_coding	Pros1	exon	ENSMUSG00000022912	ProperStrand	20	3	-19.6916
chr8	74906621	74906700	protein_coding	Eps15l1	exon	ENSMUSG00000006276	ProperStrand	42	chr16	23111374	23111484	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	11	-19.6118
chr2	32501245	32501323	protein_coding	Ak1	intron	ENSMUSG00000026817	NonProperStrand	10	chr17	24665422	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	2	-13.7343
chr4	41148555	41149311	protein_coding	Ubap2	exon	ENSMUSG00000028433	ProperStrand	292	chr1	20793525	20793575	protein_coding	Mcm3	utr3	ENSMUSG00000041859	ProperStrand	142	1	-8.4173
chr5	106325542	106325559	protein_coding	Zfp326	exon	ENSMUSG00000029290	ProperStrand	29	chr11	62416600	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-6.6005
chr2	66385173	66385189	protein_coding	Scn9a	exon	ENSMUSG00000075316	ProperStrand	58	chr1	162966812	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-6.3259
chr1	91358413	91784247	protein_coding	Agap1	exon	ENSMUSG00000055013	ProperStrand	229	chr15	98350154	98350285	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	6	-13.5580
chr2	154518953	154518970	protein_coding	Chmp4b	intron	ENSMUSG00000038467	ProperStrand	21	chr10	110918553	110918693	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-5.4616
chrX	20514557	20514613	protein_coding	Elk1	exon	ENSMUSG00000009406	ProperStrand	6	chr4	115243472	115243576	protein_coding	Cyp4a31	exon	ENSMUSG00000028712	ProperStrand	61	1	-17.7650
chr1	46132778	46132814	protein_coding	Dnahc7b	intron	ENSMUSG00000041144	NonProperStrand	57	chr11	98878378	98878468	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-6.3860
chr19	4150464	4150524	protein_coding	Coro1b	exon	ENSMUSG00000024835	ProperStrand	13	chr8	73419657	73419705	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-6.0818
chr1	134465558	134465574	protein_coding	Nfasc	utr3	ENSMUSG00000026442	NonProperStrand	48	chr11	48614367	48614434	snoRNA	ENSMUSG00000064500_SNORD95	.	ENSMUSG00000064500	ProperStrand	100	1	-12.7392
chr10	122002846	122002926	LINE	L1Md_F2	L1	chr10L1Md_F2122002095	NonProperStrand	23	chr12	41137305	41137395	protein_coding	Zfp277	exon	ENSMUSG00000055917	ProperStrand	4	1	-19.3474
chr7	30231499	30231589	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	chr11	57871503	57871588	protein_coding	Larp1	intron	ENSMUSG00000037331	ProperStrand	201	4	-18.8005
chrX	162843984	162844001	protein_coding	Ofd1	exon	ENSMUSG00000040586	NonProperStrand	11	chr2	10392656	10392710	protein_coding	Sfmbt2	intron	ENSMUSG00000061186	ProperStrand	17	1	-19.6539
chr4	126725080	126725102	protein_coding	Zmym1	exon	ENSMUSG00000043872	ProperStrand	11	chr7	134671404	134671504	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-11.3278
chr7	3658432	3658477	protein_coding	Rps9	utr3	ENSMUSG00000006333	ProperStrand	87	chrX	20292154	20293888	protein_coding	Usp11	exon	ENSMUSG00000031066	ProperStrand	29	6	-inf
chr13	114408025	114408125	protein_coding	Snx18	exon	ENSMUSG00000042364	ProperStrand	47	chr15	79913288	79913344	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	6	-inf
chr15	89137263	89137353	protein_coding	Sbf1	exon	ENSMUSG00000036529	ProperStrand	85	chr3	153574591	153574654	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	1	-8.9761
chr15	97966071	97966095	protein_coding	Asb8	utr3	ENSMUSG00000048175	ProperStrand	6	chr4	131908689	131908808	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.3738
chr7	4730079	4730105	protein_coding	Il11	intron	ENSMUSG00000004371	NonProperStrand	5	chr17	36049330	36051340	protein_coding	Mrps18b	exon	ENSMUSG00000024436	ProperStrand	21	3	-19.1752
chr17	35643348	35643381	protein_coding	Pou5f1	exon	ENSMUSG00000024406	ProperStrand	104	chr2	31924012	31924028	protein_coding	Fam78a	utr3	ENSMUSG00000050592	NonProperStrand	340	1	-8.7358
chr11	118900007	118900025	protein_coding	Cbx8	exon	ENSMUSG00000025578	ProperStrand	95	chr4	131908689	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-2.3745
chr4	76614453	76614470	protein_coding	Ptprd	intron	ENSMUSG00000028399	ProperStrand	198	chr11	97639467	97639617	protein_coding	Rpl23	exon	ENSMUSG00000071415	ProperStrand	920	1	-5.5003
chr2	126455832	126455860	protein_coding	Gabpb1	utr3	ENSMUSG00000027361	ProperStrand	54	chr10	23505151	23505260	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-2.6249
chr5	116923088	116923188	protein_coding	Srrm4	intron	ENSMUSG00000063919	NonProperStrand	9	chr10	23505210	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.5477
chr1	127491938	127491955	protein_coding	Slc35f5	utr3	ENSMUSG00000026342	ProperStrand	70	chr2	145077957	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-7.4160
chr5	74489266	74489328	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr9	64024976	64024998	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	1	-1.8397
chr11	78032681	78032781	protein_coding	Supt6h	exon	ENSMUSG00000002052	ProperStrand	119	chr15	102150004	102150157	protein_coding	Espl1	exon	ENSMUSG00000058290	ProperStrand	172	7	-19.0374
chr2	57900146	57900162	protein_coding	Ermn	utr3	ENSMUSG00000026830	ProperStrand	27	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.7840
chr9	82787246	82787879	protein_coding	Phip	utr3	ENSMUSG00000032253	ProperStrand	43	chr9	15514257	15514276	protein_coding	Slc36a4	exon	ENSMUSG00000043885	ProperStrand	94	1	-13.0831
chr1	71656050	71692136	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr7	30231484	30231593	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	2	-5.9578
chr2	90235285	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	75690723	75690739	protein_coding	Ltbp1	exon	ENSMUSG00000001870	ProperStrand	136	1	-2.9499
chr13	23627423	23627471	protein_coding	Hist1h3g	exon	ENSMUSG00000062417	ProperStrand	25	chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-7.5869
chr10	18393547	18393563	protein_coding	D10Bwg1379e	intron	ENSMUSG00000019852	NonProperStrand	120	chr18	33954816	33954868	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-2.2845
chr2	11273947	11273966	LTR	RLTR6-int	ERV1	chr2RLTR6-int11270234	NonProperStrand	1	chr10	23505222	23505277	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-inf
chr4	34513595	34513622	protein_coding	Akirin2	utr3	ENSMUSG00000028291	ProperStrand	5	chr9	88296619	88296688	protein_coding	Snx14	intron	ENSMUSG00000032422	ProperStrand	13	4	-20.2198
chr1	153201804	153203265	protein_coding	Ivns1abp	exon	ENSMUSG00000023150	ProperStrand	51	chr5	148391880	148391897	protein_coding	Flt1	exon	ENSMUSG00000029648	ProperStrand	10	1	-17.3736
chr7	117964749	117964796	protein_coding	Rnf141	intron	ENSMUSG00000030788	ProperStrand	6	chr5	138403913	138403930	protein_coding	Gjc3	intron	ENSMUSG00000056966	NonProperStrand	11	1	-18.8087
chr18	35410520	35410609	protein_coding	Ctnna1	exon	ENSMUSG00000037815	ProperStrand	115	chr1	162965536	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.1470
chr1	51831185	51833052	protein_coding	Myo1b	exon	ENSMUSG00000018417	ProperStrand	31	chr1	120733670	120733709	protein_coding	Gli2	exon	ENSMUSG00000048402	ProperStrand	148	4	-19.5977
chr4	154951160	154951231	protein_coding	Nadk	exon	ENSMUSG00000029063	ProperStrand	25	chr11	77995191	77995250	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-7.9320
chr2	90235298	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	11015616	11015632	protein_coding	Gpr44	exon	ENSMUSG00000034117	NonProperStrand	118	5	-13.8608
chr8	36529522	36529538	protein_coding	Eri1	utr3	ENSMUSG00000031527	NonProperStrand	97	chr1	162966813	162966846	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-5.3177
chr16	11144177	11144277	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr18	36885971	36885987	protein_coding	Cd14	exon	ENSMUSG00000051439	NonProperStrand	1	1	-inf
chr1	162957127	162957187	protein_coding	Zbtb37	intron	ENSMUSG00000043467	ProperStrand	15	chrX	34622906	34622943	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-5.8363
chr9	96101488	96101529	protein_coding	Tfdp2	intron	ENSMUSG00000032411	ProperStrand	95	chr11	97642951	97643005	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-4.8961
chr15	102844825	102844841	protein_coding	Hoxc5	exon	ENSMUSG00000022485	ProperStrand	40	chr1	148749348	148749364	protein_coding	Fam5c	utr3	ENSMUSG00000035131	ProperStrand	5	1	-19.0988
chr17	24665420	24665499	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	chr9	64023230	64023285	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	2	-1.7489
chr16	94014100	94014200	LTR	RLTR41	ERV1	chr16RLTR4194014029	ProperStrand	1	chr15	79913288	79913341	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-inf
chr12	106002200	106002217	protein_coding	Clmn	utr3	ENSMUSG00000021097	ProperStrand	50	chr4	131908817	131908896	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.4812
chr2	121949510	121949526	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	chr3	32237065	32237156	protein_coding	Zmat3	utr3	ENSMUSG00000027663	ProperStrand	62	2	-16.1512
chr5	136218243	136218259	protein_coding	Tmem120a	exon	ENSMUSG00000039886	NonProperStrand	2	chr5	108334195	108334256	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-12.2128
chr13	113869363	113869380	protein_coding	Cdc20b	intron	ENSMUSG00000078926	NonProperStrand	16	chr5	121655100	121655151	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-6.3246
chr11	98857008	98857024	protein_coding	Top2a	exon	ENSMUSG00000020914	ProperStrand	324	chr13	96102631	96102711	snoRNA	ENSMUSG00000077380_SNORA68	.	ENSMUSG00000077380	ProperStrand	51	1	-10.2612
chr15	97306378	97306482	LTR	MERVL-int	ERVL	chr15MERVL-int97303842	ProperStrand	1	chr3	94929838	94929854	protein_coding	Tmod4	exon	ENSMUSG00000005628	ProperStrand	1	1	-inf
chr9	43047659	43047677	protein_coding	Oaf	utr5	ENSMUSG00000032014	NonProperStrand	11	chr5	89383967	89457318	protein_coding	Slc4a4	exon	ENSMUSG00000060961	NonProperStrand	195	1	-14.4195
chr9	75755916	75755937	lincRNA	Gm16662	intron	ENSMUSG00000085159	NonProperStrand	2	chr15	83207532	83207585	protein_coding	Pacsin2	utr3	ENSMUSG00000016664	ProperStrand	30	1	-inf
chr2	90235314	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr3	127008860	127008879	protein_coding	Ank2	intron	ENSMUSG00000032826	NonProperStrand	7	1	-8.8025
chr11	76114772	76114790	protein_coding	Nxn	intron	ENSMUSG00000020844	ProperStrand	20	chr9	120038467	120038516	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-8.4791
chr8	125007547	125008650	protein_coding	Fam38a	exon	ENSMUSG00000014444	ProperStrand	132	chr17	27957467	27957485	protein_coding	D17Wsu92e	utr5	ENSMUSG00000056692	NonProperStrand	11	1	-15.1870
chr1	34350210	34351236	protein_coding	Dst	exon	ENSMUSG00000026131	ProperStrand	461	chr14	33005038	33005070	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-0.7506
chr2	156679207	156679224	antisense	5430405H02Rik	.	ENSMUSG00000085741	ProperStrand	27	chr17	24857742	24857775	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.7240
chr5	134714318	134714357	protein_coding	Gtf2i	utr3	ENSMUSG00000060261	ProperStrand	41	chr7	29136575	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	4	-10.5259
chr19	6376885	6376910	protein_coding	Sf1	utr3	ENSMUSG00000024949	NonProperStrand	1	chr2	32818840	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-inf
chr14	70205279	70205295	protein_coding	Rhobtb2	utr5	ENSMUSG00000022075	ProperStrand	22	chr5	121655016	121655102	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.6854
chr1	89608736	89609848	protein_coding	Inpp5d	exon	ENSMUSG00000026288	ProperStrand	75	chr1	162967511	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-3.0693
chr3	29912080	29912097	protein_coding	Mecom	utr5	ENSMUSG00000027684	ProperStrand	12	chr8	73419652	73419742	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-6.2451
chr8	13416897	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr10	127480574	127480590	protein_coding	Naca	exon	ENSMUSG00000061315	NonProperStrand	13	1	-9.5462
chr6	114260511	114260527	protein_coding	Slc6a1	exon	ENSMUSG00000030310	NonProperStrand	147	chr16	23110525	23110572	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.0963
chr16	57122214	57122304	protein_coding	Tomm70a	exon	ENSMUSG00000022752	ProperStrand	82	chr18	33954827	33954907	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-2.9404
chr18	35069891	35073232	protein_coding	Etf1	exon	ENSMUSG00000024360	ProperStrand	74	chr17	36000485	36000501	protein_coding	Nrm	exon	ENSMUSG00000059791	ProperStrand	253	2	-15.7748
chr7	106002470	106002486	protein_coding	Wnt11	utr3	ENSMUSG00000015957	ProperStrand	14	chr17	24857767	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.9973
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	70811137	70811165	protein_coding	Mettl8	intron	ENSMUSG00000041975	ProperStrand	2	1	-11.8388
chr6	47738068	47738126	misc_RNA	Y_RNA	.	ENSMUSG00000065701	ProperStrand	129	chr11	68886942	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	11	-20.9861
chr19	43574518	43574561	protein_coding	Got1	utr3	ENSMUSG00000025190	ProperStrand	32	chr4	131866155	131866245	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-4.8615
chr5	74489543	74489605	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr15	35700538	35700554	protein_coding	Vps13b	exon	ENSMUSG00000037646	NonProperStrand	12	1	-8.8641
chr1	153602594	153606872	protein_coding	Edem3	utr5	ENSMUSG00000043019	ProperStrand	84	chr10	23505147	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-5.5086
chrX	35793375	35793433	protein_coding	Lamp2	exon	ENSMUSG00000016534	ProperStrand	19	chr7	52382234	52382266	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-10.6101
chr11	31267727	31267748	protein_coding	Stc2	exon	ENSMUSG00000020303	ProperStrand	18	chr7	52378438	52378482	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	1	-10.9430
chr10	107800720	107800839	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	chr15	34370545	34370678	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	7	-3.4634
chrX	159236392	159236410	protein_coding	Txlng	intron	ENSMUSG00000038344	ProperStrand	45	chr2	5724669	5724723	protein_coding	Cdc123	intron	ENSMUSG00000039128	ProperStrand	19	1	-16.2377
chr10	80642375	80642505	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr7	38433950	38433968	protein_coding	Zfp536	intron	ENSMUSG00000043456	ProperStrand	57	1	-6.2002
chr2	28316577	28316667	LTR	MTB_Mm	MaLR	chr2MTB_Mm28316397	NonProperStrand	1	chr2	28316891	28316981	SINE	B3A	B2	chr2B3A28316873	NonProperStrand	1	1	-inf
chr9	98892637	98893016	protein_coding	Faim	exon	ENSMUSG00000032463	ProperStrand	2	chr18	35716832	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-9.2832
chr1	34213498	34364178	protein_coding	Dst	exon	ENSMUSG00000026131	ProperStrand	461	chr18	33954815	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	7	-6.6376
chr8	86520176	86520266	protein_coding	Prkaca	utr3	ENSMUSG00000005469	ProperStrand	17	chr10	23505167	23505247	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.3129
chr10	87663894	87663929	protein_coding	Ccdc53	utr5	ENSMUSG00000020056	ProperStrand	2	chr10	110918592	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-10.7503
chr11	30774124	30774152	protein_coding	Psme4	exon	ENSMUSG00000040850	ProperStrand	40	chr17	24665454	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-5.7325
chr8	72337846	72337947	protein_coding	Gmip	exon	ENSMUSG00000036246	ProperStrand	102	chr19	8963027	8963082	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.4449
chr12	54111596	54126710	protein_coding	Akap6	exon	ENSMUSG00000061603	ProperStrand	9	chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	1	-13.3739
chr17	48061284	48061356	protein_coding	Foxp4	utr5	ENSMUSG00000023991	ProperStrand	27	chr16	23110910	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.1875
chr5	136386471	136386497	protein_coding	Ywhag	utr3	ENSMUSG00000051391	ProperStrand	142	chr7	116664796	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	5	-7.0475
chr15	98677423	98677439	protein_coding	Mll2	exon	ENSMUSG00000048154	NonProperStrand	20	chr16	23110828	23110871	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.6223
chr3	89539771	89539871	protein_coding	Adar	exon	ENSMUSG00000027951	ProperStrand	52	chr17	72008192	72008209	protein_coding	Wdr43	utr3	ENSMUSG00000041057	ProperStrand	70	1	-13.2938
chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr11	67005924	67005940	protein_coding	Myh2	exon	ENSMUSG00000033196	ProperStrand	66	1	-6.2659
chr15	92864220	92864310	LINE	L1Md_F2	L1	chr15L1Md_F292864176	ProperStrand	1	chr15	92864022	92864112	LTR	RMER19C	ERVK	chr15RMER19C92863768	ProperStrand	1	1	-inf
chr2	30007127	30007212	protein_coding	Tbc1d13	utr3	ENSMUSG00000039678	ProperStrand	24	chr1	39605605	39605695	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-9.1875
chr17	4082236	4082290	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr5	113509595	113510587	protein_coding	Crybb3	utr5	ENSMUSG00000029352	NonProperStrand	1	1	-inf
chr6	149283952	149283969	protein_coding	2810474O19Rik	utr3	ENSMUSG00000032712	ProperStrand	70	chr4	131866158	131866287	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	3	-8.4606
chr16	35410390	35410480	protein_coding	Pdia5	exon	ENSMUSG00000022844	ProperStrand	26	chr1	90598740	90598758	protein_coding	Arl4c	utr5	ENSMUSG00000049866	ProperStrand	25	3	-19.4015
chr15	11313867	11313901	protein_coding	Tars	exon	ENSMUSG00000022241	ProperStrand	121	chr2	130109497	130109513	protein_coding	Idh3b	exon	ENSMUSG00000027406	ProperStrand	146	1	-10.1202
chr5	111082720	111082737	protein_coding	Ddx51	exon	ENSMUSG00000029504	ProperStrand	54	chr10	23505152	23505209	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.3802
chr5	130009771	130009889	protein_coding	Sfswap	intron	ENSMUSG00000029439	ProperStrand	34	chr19	8799610	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-7.9015
chr9	56266647	56266665	protein_coding	Hmg20a	utr5	ENSMUSG00000032329	ProperStrand	87	chr10	23505152	23505246	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-0.7713
chr17	36022885	36023092	protein_coding	Dhx16	exon	ENSMUSG00000024422	ProperStrand	28	chr11	51551280	51551329	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	1	-9.2323
chr11	57719118	57719208	LINE	L1_Rod	L1	chr11L1_Rod57719138	NonProperStrand	1	chr11	57719206	57719286	SINE	B3	B2	chr11B357719220	NonProperStrand	1	1	-inf
chr15	98604924	98606960	protein_coding	Wnt10b	exon	ENSMUSG00000022996	NonProperStrand	189	chr4	32773335	32773367	protein_coding	Mdn1	exon	ENSMUSG00000058006	ProperStrand	184	1	-8.7671
chr16	8689098	8689114	protein_coding	Usp7	utr3	ENSMUSG00000022710	NonProperStrand	11	chr15	34370541	34370621	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-11.2106
chr11	83107803	83107903	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	chr13	49779748	49779805	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-2.7614
chr2	22444817	22444867	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	chr2	91436262	91436335	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	2	-4.0320
chr7	148444960	148445031	protein_coding	Phrf1	exon	ENSMUSG00000038611	ProperStrand	86	chr2	144091716	144091748	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	ProperStrand	549	1	-8.1624
chr17	38290745	38290764	LTR	MurERV4-int	ERVK	chr17MurERV4-int38290059	ProperStrand	21	chr6	124350871	124350888	protein_coding	Pex5	intron	ENSMUSG00000005069	ProperStrand	27	1	-17.0450
chr10	75322485	75322551	protein_coding	Mif	exon	ENSMUSG00000033307	ProperStrand	146	chr9	15119665	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.2356
chr17	57093069	57093086	protein_coding	Acer1	utr3	ENSMUSG00000045019	NonProperStrand	2	chr5	121655016	121655097	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-11.0755
chr6	94206608	94206688	protein_coding	Magi1	intron	ENSMUSG00000045095	ProperStrand	106	chr15	86112202	86112292	protein_coding	Tbc1d22a	intron	ENSMUSG00000051864	ProperStrand	15	1	-15.0037
chr2	91515229	91515319	protein_coding	Atg13	utr3	ENSMUSG00000027244	ProperStrand	22	chr19	8963026	8963082	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-10.0539
chr1	133875382	133875482	protein_coding	Slc45a3	exon	ENSMUSG00000026435	ProperStrand	8	chrX	34622906	34622980	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-11.6602
chr4	132626920	132627020	protein_coding	Ahdc1	intron	ENSMUSG00000037692	ProperStrand	100	chr11	69483136	69483192	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-4.6753
chr16	84724233	84725433	protein_coding	Mrpl39	exon	ENSMUSG00000022889	ProperStrand	32	chr11	62418034	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-6.8011
chr7	19651151	19651168	protein_coding	Rsph6a	exon	ENSMUSG00000040866	NonProperStrand	5	chr2	130103752	130103800	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-13.6295
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr8	60920852	60920870	protein_coding	Galntl6	intron	ENSMUSG00000061864	ProperStrand	44	1	-6.5166
chr2	95187794	95187874	LINE	Lx7	L1	chr2Lx795187259	NonProperStrand	1	chr2	95187950	95188040	LINE	Lx7	L1	chr2Lx795187898	ProperStrand	1	1	-inf
chr4	43505751	43505851	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr18	70681347	70681425	protein_coding	Poli	intron	ENSMUSG00000038425	ProperStrand	7	3	-17.2629
chr11	70368665	70368815	protein_coding	Pld2	exon	ENSMUSG00000020828	NonProperStrand	3	chr1	56997556	56997573	protein_coding	Satb2	intron	ENSMUSG00000038331	NonProperStrand	24	1	-inf
chr15	34066541	34069544	protein_coding	Mtdh	exon	ENSMUSG00000022255	ProperStrand	37	chr16	23111384	23111464	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.9851
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	5	-2.2409
chr9	78215533	78215590	protein_coding	Dppa5a	exon	ENSMUSG00000060461	ProperStrand	79	chr6	115757992	115758046	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-4.9376
chrX	84483702	84483718	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr1	9932550	9932610	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-2.8781
chr7	52823389	52823440	lincRNA	0610005C13Rik	exon	ENSMUSG00000085214	ProperStrand	2	chr16	23110887	23110993	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr5	116314939	116314956	protein_coding	Cit	intron	ENSMUSG00000029516	ProperStrand	45	chr11	6428062	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.7211
chr7	109214309	109219810	protein_coding	Trpc2	utr5	ENSMUSG00000070425	ProperStrand	15	chr18	35716685	35716775	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.7126
chr9	45525530	45525546	protein_coding	Dscaml1	exon	ENSMUSG00000032087	ProperStrand	23	chr5	115904568	115904667	protein_coding	Msi1	utr3	ENSMUSG00000054256	ProperStrand	12	1	-18.3296
chrX	71589885	71589903	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-1.0381
chr5	50390480	50393100	protein_coding	Gpr125	exon	ENSMUSG00000029090	ProperStrand	29	chr7	31093795	31093811	protein_coding	Alkbh6	utr5	ENSMUSG00000042831	ProperStrand	5	1	-inf
chr5	115720451	115720541	protein_coding	Rnf10	intron	ENSMUSG00000041740	NonProperStrand	21	chr5	115180885	115180965	protein_coding	Git2	intron	ENSMUSG00000041890	ProperStrand	20	1	-17.4608
chr2	167047370	167047457	protein_coding	Ptgis	intron	ENSMUSG00000017969	NonProperStrand	3	chr5	130300494	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-8.5956
chr16	23111741	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	chr13	23409359	23409412	tRNA	tRNA99-MetCAT	.	1061123	ProperStrand	4	1	-7.1763
chr9	30897562	30898027	protein_coding	St14	exon	ENSMUSG00000031995	ProperStrand	90	chr2	26768064	26768119	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	1	-7.5842
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr17	24857641	24857671	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	2	-7.3134
chr18	15000528	15017713	protein_coding	Taf4b	exon	ENSMUSG00000054321	ProperStrand	8	chr4	131865855	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.4974
chr1	112029275	112029292	protein_coding	Cdh7	intron	ENSMUSG00000026312	NonProperStrand	3	chr5	74489570	74489670	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-10.0122
chr9	15119297	15119425	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	chr11	74718931	74718962	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	1	-1.3593
chr3	142351261	142351279	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr4	56910556	56910618	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-1.2145
chr12	113852090	113852108	protein_coding	Inf2	intron	ENSMUSG00000037679	ProperStrand	12	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-8.4427
chr17	23954257	23954291	protein_coding	Srrm2	utr3	ENSMUSG00000039218	ProperStrand	521	chr17	66710700	66710746	protein_coding	1110012J17Rik	intron	ENSMUSG00000052105	ProperStrand	60	1	-8.9869
chr3	153574607	153574654	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	chr7	116664804	116664868	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-1.1503
chr5	124451581	124451671	protein_coding-noncoding	Hip1r	utr5	ENSMUSG00000000915	ProperStrand	2	chr9	120038497	120038587	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-inf
chr12	82050034	82050052	protein_coding-noncoding	Srsf5	utr5	ENSMUSG00000021134	ProperStrand	10	chr10	23505157	23505247	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.3364
chr4	133561518	133561553	protein_coding	Lin28a	utr3	ENSMUSG00000050966	ProperStrand	55	chr9	120038615	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.1957
chr9	67785470	67785511	protein_coding	Vps13c	exon	ENSMUSG00000035284	ProperStrand	69	chr11	69483188	69483278	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-5.9892
chr3	152450608	152451718	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	chr17	35087895	35087965	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	4	-5.4423
chr12	85350481	85350499	protein_coding	Acot1	utr5	ENSMUSG00000072949	ProperStrand	72	chr9	120038613	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-4.7460
chr4	118806103	118806138	protein_coding	Slc2a1	exon	ENSMUSG00000028645	ProperStrand	361	chr16	23110453	23110526	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	6	-3.5345
chr2	119179575	119179714	protein_coding	Chac1	utr3	ENSMUSG00000027313	ProperStrand	22	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	2	-14.3948
chr10	77460343	77462629	protein_coding	Pfkl	exon	ENSMUSG00000020277	ProperStrand	179	chr7	54110468	54110558	protein_coding	Ldha	utr3	ENSMUSG00000063229	ProperStrand	280	1	-8.0397
chr5	100855902	100855973	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr8	82197143	82197243	protein_coding	Otud4	exon	ENSMUSG00000036990	ProperStrand	45	1	-7.2102
chrX	92221202	92221219	protein_coding	Spin4	exon	ENSMUSG00000071722	NonProperStrand	14	chr10	90581033	90581174	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-7.7067
chr2	130102052	130102106	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	chr15	57807534	57807583	tRNA	tRNA913-MetCAT	.	989931	ProperStrand	48	1	-5.7937
chr7	51322875	51322892	LTR	LTRIS2	ERV1	chr7LTRIS251322870	NonProperStrand	1	chr14	52829520	52829569	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-inf
chr12	52709544	52709561	protein_coding	Strn3	utr3	ENSMUSG00000020954	NonProperStrand	4	chr5	148374646	148374662	protein_coding	Flt1	utr3	ENSMUSG00000029648	NonProperStrand	9	1	-19.8837
chr11	97413144	97413160	protein_coding	Srcin1	exon	ENSMUSG00000038453	NonProperStrand	21	chr4	143400017	143400033	protein_coding	Gm13084	utr3	ENSMUSG00000059218	NonProperStrand	1	1	-inf
chr15	59146889	59146913	protein_coding	Sqle	utr5	ENSMUSG00000022351	ProperStrand	19	chr19	8800355	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	3	-13.4702
chr15	102147120	102147165	protein_coding	Espl1	exon	ENSMUSG00000058290	ProperStrand	172	chr9	15119720	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-3.2487
chrX	91441779	91441869	protein_coding	Eif2s3x	intron	ENSMUSG00000035150	ProperStrand	55	chr2	91436229	91436309	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-7.6710
chr8	126088183	126088219	rRNA	n-R5s115	.	ENSMUSG00000075862	ProperStrand	31	chr11	6428088	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.4276
chr13	96374713	96374729	protein_coding	F2r	exon	ENSMUSG00000048376	NonProperStrand	88	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	2	-13.0066
chr1	165207209	165207225	protein_coding	Prrx1	intron	ENSMUSG00000026586	ProperStrand	19	chr17	46912188	46912217	protein_coding	Rpl7l1	utr3	ENSMUSG00000063888	ProperStrand	37	1	-16.6310
chr11	49696839	49696879	protein_coding	Mapk9	utr3	ENSMUSG00000020366	ProperStrand	20	chr12	17552948	17553028	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	3	-16.4953
chr19	10976973	10977224	protein_coding	Prpf19	exon	ENSMUSG00000024735	ProperStrand	75	chr11	6428076	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.7944
chr14	21512372	21512398	protein_coding	Sec24c	exon	ENSMUSG00000039367	ProperStrand	60	chr10	39978386	39978486	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-5.4595
chr4	131908236	131908300	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	chr11	79518184	79518226	tRNA	tRNA550-ThrCGT	.	1492451	ProperStrand	21	1	-3.1622
chr11	19964171	19964261	protein_coding	Actr2	utr3	ENSMUSG00000020152	ProperStrand	72	chr12	106269477	106269557	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-3.7979
chr9	64023026	64023084	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	chrX	40944841	40944857	protein_coding	Gm362	exon	ENSMUSG00000078320	ProperStrand	129	1	-7.1538
chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	chr9	50816824	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	1	-7.7717
chr2	154171683	154171700	protein_coding	Cdk5rap1	exon	ENSMUSG00000027487	ProperStrand	75	chr5	121655016	121655097	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.3364
chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	chr8	108720701	108720737	protein_coding	Slc7a6	utr3	ENSMUSG00000031904	ProperStrand	22	1	-11.4284
chr1	88253275	88253590	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chr15	71624775	71624796	snoRNA	ENSMUSG00000088895_SNORA81	.	ENSMUSG00000088895	ProperStrand	348	1	-3.9428
chr7	51503877	51503895	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	chr17	23722924	23723002	protein_coding	Zfp13	utr5	ENSMUSG00000062012	ProperStrand	7	2	-inf
chr19	45071862	45071878	protein_coding	Sema4g	exon	ENSMUSG00000025207	ProperStrand	58	chr4	140121137	140121153	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	1	-11.7391
chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	chr5	108336375	108336411	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-1.0676
chr4	118954080	118954170	protein_coding-noncoding	Ybx1	utr3	ENSMUSG00000028639	ProperStrand	1	chr4	118954360	118954440	protein_coding	Ybx1	intron	ENSMUSG00000028639	ProperStrand	171	1	-inf
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	2	-5.8156
chr10	59754443	59754477	protein_coding	Psap	exon	ENSMUSG00000004207	ProperStrand	124	chr1	63225577	63225667	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	4	-16.1538
chr15	36700937	36701021	protein_coding	Ywhaz	utr3	ENSMUSG00000022285	ProperStrand	73	chr1	162965560	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-5.0677
chr19	6261807	6261824	protein_coding	Atg2a	exon	ENSMUSG00000024773	ProperStrand	97	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-4.9074
chr2	130101971	130102088	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	chr10	39978350	39978463	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	22	-18.6805
chrX	127781092	127781112	LINE	Lx	L1	chrXLx127780898	ProperStrand	24	chr11	62418036	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-7.3792
chr3	78902291	78903071	protein_coding	Rapgef2	exon	ENSMUSG00000062232	ProperStrand	14	chr11	116938556	116938646	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-9.0930
chr4	132595479	132595546	protein_coding	Ahdc1	utr5	ENSMUSG00000037692	ProperStrand	100	chr15	82980166	82980230	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-6.1289
chr5	116011514	116012443	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	chr3	68889026	68889126	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-0.8167
chr8	125025734	125025817	protein_coding	Fam38a	utr5	ENSMUSG00000014444	ProperStrand	132	chr11	97642985	97643075	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.2473
chr3	96132420	96132514	snRNA	ENSMUSG00000075978_U1	.	ENSMUSG00000075978	ProperStrand	132	chr5	130295417	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	15	-19.7029
chr2	22444744	22444822	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	chr9	15119968	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	3	-5.6248
chr2	31924012	31924028	protein_coding	Fam78a	utr3	ENSMUSG00000050592	NonProperStrand	340	chr10	107800719	107800854	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	1	-4.6659
chr10	60692417	60692433	protein_coding	Adamts14	exon	ENSMUSG00000059901	NonProperStrand	127	chr1	162967783	162967806	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	1	-8.7449
chr12	99497602	99497618	protein_coding	Galc	utr5	ENSMUSG00000021003	NonProperStrand	65	chr18	73693170	73693189	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-5.3678
chr1	180885279	180885295	protein_coding	Smyd3	utr3	ENSMUSG00000055067	NonProperStrand	190	chr11	106362639	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-5.1386
chr12	88510449	88510471	protein_coding	Tmed8	utr3	ENSMUSG00000034111	ProperStrand	22	chr9	120039533	120039623	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-5.2308
chr16	17652074	17652174	protein_coding	Med15	utr3	ENSMUSG00000012114	ProperStrand	24	chr4	149616279	149618160	protein_coding	Eno1	exon	ENSMUSG00000063524	ProperStrand	432	1	-11.2131
chr2	129998643	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr17	24784553	24784569	protein_coding	Slc9a3r2	exon	ENSMUSG00000002504	ProperStrand	10	1	-11.7676
chr2	20703565	20706723	protein_coding	Etl4	exon	ENSMUSG00000036617	ProperStrand	86	chr16	23111448	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-2.7308
chr5	123973720	123973738	protein_coding	Diablo	intron	ENSMUSG00000029433	ProperStrand	3	chr3	123210914	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-8.0648
chr6	142306333	142306350	protein_coding	Recql	utr3	ENSMUSG00000030243	ProperStrand	12	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-9.1155
chr7	19591412	19591429	protein_coding	Irf2bp1	exon	ENSMUSG00000044030	NonProperStrand	81	chr14	31827479	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	2	-10.2824
chr5	74489543	74489613	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr5	37204514	37204532	protein_coding	Man2b2	exon	ENSMUSG00000029119	ProperStrand	33	1	-6.8051
chr8	3606326	3606343	protein_coding	Camsap3	exon	ENSMUSG00000044433	ProperStrand	86	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-7.0231
chr6	88455077	88455167	protein_coding	Sec61a1	utr3	ENSMUSG00000030082	ProperStrand	46	chr2	158185576	158185654	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-7.0137
chr1	55044863	55044953	protein_coding	Sf3b1	exon	ENSMUSG00000025982	ProperStrand	158	chr5	74489543	74489623	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	5	-10.1283
chr5	122580412	122584741	protein_coding	Ccdc63	utr5	ENSMUSG00000043036	ProperStrand	120	chr4	131865855	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.6746
chr9	64025164	64025244	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	chr13	51743572	51743662	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	42	-20.9795
chrX	71612102	71612119	protein_coding	Ubl4	utr3	ENSMUSG00000015290	NonProperStrand	6	chr16	23111429	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-5.4240
chr14	33157519	33157609	protein_coding	Ogdhl	exon	ENSMUSG00000021913	ProperStrand	182	chr9	15119661	15119741	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	4	-4.4632
chr2	174290899	174290924	protein_coding	Slmo2	utr3	ENSMUSG00000016257	ProperStrand	1	chr4	131908236	131908293	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-inf
chrX	132673816	132673833	protein_coding	Bex4	intron	ENSMUSG00000047844	NonProperStrand	70	chr10	23505148	23505205	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.0304
chr15	36532633	36532713	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr7	134673812	134673982	protein_coding	Srcap	exon	ENSMUSG00000053877	ProperStrand	69	1	-7.6038
chr8	86457403	86464174	protein_coding	Lphn1	exon	ENSMUSG00000013033	ProperStrand	221	chr4	131908299	131908438	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-1.3216
chrX	71189721	71196648	protein_coding	Hcfc1	utr3	ENSMUSG00000031386	ProperStrand	424	chr18	73693166	73693186	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	2	-3.5450
chr8	48972477	48972495	protein_coding	Wwc2	exon	ENSMUSG00000031563	NonProperStrand	56	chr16	23110455	23110523	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-4.5385
chr19	44188368	44188444	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr11	65598380	65598424	protein_coding	Map2k4	intron	ENSMUSG00000033352	ProperStrand	10	4	-20.1378
chr4	140877698	140877800	protein_coding	Epha2	exon	ENSMUSG00000006445	ProperStrand	148	chr1	173041632	173041649	tRNA	tRNA710-ValCAC	.	1681251	ProperStrand	206	1	-9.0297
chr7	29136525	29136646	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	chr1	173041608	173041649	tRNA	tRNA710-ValCAC	.	107829	ProperStrand	206	5	-4.6905
chr1	75357025	75357042	protein_coding	Des	exon	ENSMUSG00000026208	NonProperStrand	1	chr1	182530710	182530777	protein_coding	Parp1	utr3	ENSMUSG00000026496	ProperStrand	227	1	-inf
chr7	147997838	147997948	protein_coding	Zfp941	exon	ENSMUSG00000060314	ProperStrand	2	chr7	148634805	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-11.3325
chr13	56353448	56353465	protein_coding	Neurog1	utr5	ENSMUSG00000048904	ProperStrand	105	chr11	119971672	119971726	protein_coding	Slc38a10	exon	ENSMUSG00000061306	ProperStrand	91	1	-11.3517
chr5	148113281	148113297	protein_coding	Cdx2	utr3	ENSMUSG00000029646	ProperStrand	276	chr5	138609075	138609131	protein_coding	Mcm7	exon	ENSMUSG00000029730	ProperStrand	258	1	-7.3428
chr10	87394474	87394493	protein_coding	Igf1	utr3	ENSMUSG00000020053	NonProperStrand	3	chr18	35716703	35716792	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-8.1910
chr16	57391590	57391643	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr15	79908967	79909012	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	NonProperStrand	3	1	-16.7351
chr12	88912985	88913005	protein_coding	Gm2022	intron	ENSMUSG00000071217	NonProperStrand	57	chr1	162968442	162968462	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-6.1802
chr16	14170576	14175483	protein_coding	Nde1	utr5	ENSMUSG00000022678	ProperStrand	23	chr16	57391761	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	1	-9.7264
chr6	85414894	85415939	protein_coding	Cct7	exon	ENSMUSG00000030007	ProperStrand	173	chr5	130300470	130300550	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-0.9278
chr2	151313335	151313352	LTR	RLTR22_Mur	ERVK	chr2RLTR22_Mur151313077	ProperStrand	1	chrX	84483700	84483719	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-inf
chr18	35063824	35063851	protein_coding	Etf1	utr3	ENSMUSG00000024360	ProperStrand	74	chr10	128002578	128002596	protein_coding	Pa2g4	intron	ENSMUSG00000025364	ProperStrand	72	1	-12.5258
chr10	126532147	126532163	protein_coding	Os9	utr3	ENSMUSG00000040462	NonProperStrand	28	chr16	23111374	23111449	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.4504
chr19	46836213	46836229	protein_coding	Cnnm2	utr5	ENSMUSG00000064105	NonProperStrand	19	chr8	73419657	73419775	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-5.3188
chr4	128899900	128899916	protein_coding	C77080	exon	ENSMUSG00000050390	NonProperStrand	28	chr6	125136448	125136538	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	5	-18.8147
chr4	131908835	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	chr13	22107658	22107698	tRNA	tRNA974-ValAAC	.	465226	ProperStrand	28	1	-2.4067
chr14	31951335	31951556	protein_coding	Nt5dc2	exon	ENSMUSG00000071547	ProperStrand	22	chr1	162967490	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-5.3966
chr12	102280818	102297040	protein_coding	Smek1	exon	ENSMUSG00000041846	ProperStrand	66	chr16	23110937	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	8	-6.5191
chr3	90907857	90907947	LINE	L1Md_A	L1	chr3L1Md_A90902858	ProperStrand	18	chr4	131865413	131865493	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	7	-22.6525
chr16	57391759	57391788	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr5	121655014	121655114	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	NonProperStrand	38	1	-11.2271
chr6	93127321	93127338	lincRNA	9530026P05Rik	intron	ENSMUSG00000087573	ProperStrand	51	chr2	158182209	158182297	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-5.3185
chr9	106788433	106788526	protein_coding	Rbm15b	exon	ENSMUSG00000045365	ProperStrand	17	chr7	52381978	52382007	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-9.2540
chr2	34824734	34824750	SINE	B4A	B4	chr2B4A34824508	ProperStrand	4	chr9	120039547	120039574	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-8.8220
chr7	17002731	17005534	protein_coding	Zc3h4	exon	ENSMUSG00000059273	ProperStrand	95	chr1	162965983	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-2.7747
chr8	72713246	72713336	protein_coding-noncoding	Slc25a42	utr3	ENSMUSG00000002346	ProperStrand	1	chr8	72713480	72713560	protein_coding	Slc25a42	intron	ENSMUSG00000002346	ProperStrand	9	1	-inf
chr10	79878017	79878220	protein_coding	Tcf3	exon	ENSMUSG00000020167	ProperStrand	73	chr12	76647324	76647340	protein_coding	Ppp2r5e	intron	ENSMUSG00000021051	ProperStrand	9	2	-20.8842
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr11	51551280	51551395	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	3	-5.4544
chr4	106770704	106770721	protein_coding	Cdcp2	intron	ENSMUSG00000047636	NonProperStrand	35	chr15	79908984	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-6.5364
chr17	23961068	23961242	protein_coding	Srrm2	utr3	ENSMUSG00000039218	ProperStrand	521	chr12	81492598	81492659	snoRNA	ENSMUSG00000088158_Scarna3b	.	ENSMUSG00000088158	ProperStrand	147	1	-7.2001
chr4	118808853	118808952	protein_coding	Slc2a1	exon	ENSMUSG00000028645	ProperStrand	361	chr1	162966008	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	3	-2.6610
chr16	22059152	22059242	protein_coding	Igf2bp2	utr3	ENSMUSG00000033581	ProperStrand	23	chr5	130295415	130295495	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-7.1500
chr5	31372011	31372709	protein_coding	Cad	exon	ENSMUSG00000013629	ProperStrand	260	chr1	89673650	89673730	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-0.9538
chr7	148634664	148636948	protein_coding	Rplp2	exon	ENSMUSG00000025508	ProperStrand	106	chr4	131866155	131866249	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	8	-19.9584
chr15	5068434	5068479	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	chr8	32260335	32260385	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	5	-0.7115
chr5	74489203	74489254	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr8	74135078	74135094	protein_coding	Glt25d1	utr5	ENSMUSG00000034807	ProperStrand	36	1	-6.6315
chr11	121009265	121009311	protein_coding	Tex19.1	utr3	ENSMUSG00000039329	ProperStrand	12	chr5	121655018	121655108	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-6.9120
mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr2	153050783	153050799	protein_coding	Tspyl3	exon	ENSMUSG00000074671	ProperStrand	228	1	-3.3615
chr15	77795339	77795414	protein_coding	Eif3d	exon	ENSMUSG00000016554	ProperStrand	69	chr11	70813424	70813441	protein_coding	Dhx33	exon	ENSMUSG00000040620	ProperStrand	41	1	-13.8020
chr1	39902173	39902514	LINE	L2b	L2	chr1L2b39902159	NonProperStrand	28	chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	1	-13.2273
chr14	80262508	80262524	lincRNA	Gm6999	intron	ENSMUSG00000075495	ProperStrand	265	chr5	130295413	130295533	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	6	-14.2555
chr11	116199950	116221160	protein_coding	Rnf157	utr3	ENSMUSG00000052949	ProperStrand	32	chr4	131865855	131865949	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-7.3474
chr4	131908430	131908480	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	1	-2.9152
chr5	77351245	77351317	protein_coding	Ppat	exon	ENSMUSG00000029246	ProperStrand	55	chr18	35716766	35716856	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.3144
chr10	126717250	126717308	protein_coding	Dctn2	intron	ENSMUSG00000025410	ProperStrand	42	chr11	69483136	69483181	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.0756
chr1	141319671	141319687	protein_coding	Zbtb41	utr5	ENSMUSG00000033964	NonProperStrand	145	chr18	64555161	64555182	protein_coding	Onecut2	utr3	ENSMUSG00000045991	ProperStrand	8	1	-15.6630
chrX	157236765	157236783	protein_coding	Rs1	utr3	ENSMUSG00000031293	ProperStrand	3	chr4	122970425	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-13.7749
chr2	31041051	31041068	protein_coding	Gpr107	exon	ENSMUSG00000000194	NonProperStrand	2	chr6	125112116	125112359	protein_coding	Gapdh	exon	ENSMUSG00000057666	ProperStrand	356	1	-17.2805
chr4	44046970	44046986	protein_coding	Gne	utr3	ENSMUSG00000028479	ProperStrand	8	chr11	69483136	69483213	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-10.4333
chr4	140623082	140623155	protein_coding	Necap2	utr3	ENSMUSG00000028923	ProperStrand	4	chr11	69483146	69483236	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-7.8378
chr14	31371936	31386787	protein_coding	Tkt	exon	ENSMUSG00000021957	ProperStrand	160	chr7	116664813	116664924	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	6	-8.2295
chr12	111891513	111891603	protein_coding	Dync1h1	intron	ENSMUSG00000018707	ProperStrand	648	chr15	98350173	98350253	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-0.8234
chr16	57391758	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr1	63225609	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	6	-10.6645
chr16	64770796	64770813	protein_coding	4930453N24Rik	utr5	ENSMUSG00000059920	ProperStrand	39	chr16	23111385	23111418	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.9006
chr2	26493438	26493518	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr3	104595894	104596823	protein_coding	Rhoc	exon	ENSMUSG00000002233	ProperStrand	41	1	-6.9502
chr11	6520320	6520458	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	chr11	69481351	69481479	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	26	-20.8968
chr9	104054559	104054660	protein_coding	Dnajc13	utr3	ENSMUSG00000032560	ProperStrand	60	chr18	35716836	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	7	-15.9167
chr2	121949511	121949528	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	chr11	97641465	97641497	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	1	-4.9010
chr2	156000197	156000215	protein_coding	Rbm39	intron	ENSMUSG00000027620	ProperStrand	38	chr16	23111695	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-7.0053
chr8	87367964	87368043	protein_coding	Calr	exon	ENSMUSG00000003814	ProperStrand	232	chr19	8800378	8800468	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-1.2930
chr8	103650189	103650279	LINE	Lx2B	L1	chr8Lx2B103649329	ProperStrand	1	chr1	88034182	88034272	protein_coding	Psmd1	intron	ENSMUSG00000026229	ProperStrand	664	1	-inf
chr2	34629594	34629674	protein_coding	Hspa5	exon	ENSMUSG00000026864	ProperStrand	181	chr9	15119676	15119766	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-0.9580
chr15	101156173	101156263	LTR	ORR1D1	MaLR	chr15ORR1D1101156076	NonProperStrand	1	chr16	11250994	11251084	protein_coding	Gspt1	intron	ENSMUSG00000062203	NonProperStrand	4	1	-inf
chr11	116535465	116535534	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr2	62141921	62141938	protein_coding	Slc4a10	exon	ENSMUSG00000026904	NonProperStrand	4	1	-11.5504
chr11	14047576	14047592	lincRNA	4930554G24Rik	exon	ENSMUSG00000085452	NonProperStrand	6	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	2	-17.8872
chr11	72950610	72950628	protein_coding	Gsg2	exon	ENSMUSG00000050107	ProperStrand	9	chr11	69483134	69483224	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	4	-18.8049
chr2	4974190	4974207	protein_coding	Optn	exon	ENSMUSG00000026672	ProperStrand	451	chr9	120037897	120037930	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-1.2418
chrX	71517859	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	chr16	23109045	23109091	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	2	-2.2520
chr5	45401465	45401545	LINE	L1Md_F2	L1	chr5L1Md_F245401408	NonProperStrand	7	chr16	95573121	95573211	LTR	MTE2a	MaLR	chr16MTE2a95573130	ProperStrand	1	1	-inf
chr2	104311490	104311570	protein_coding	Hipk3	exon	ENSMUSG00000027177	ProperStrand	5	chr17	35299528	35299618	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-9.8702
chr1	71683940	71697234	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr14	31827477	31827548	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	2	-3.3901
chr4	131399490	131399506	protein_coding	Mecr	exon	ENSMUSG00000028910	NonProperStrand	109	chr16	23111694	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	5	-6.4278
chr8	86465059	86465102	protein_coding	Lphn1	utr3	ENSMUSG00000013033	ProperStrand	221	chr7	52715005	52715040	protein_coding	Ftl1	utr5	ENSMUSG00000050708	ProperStrand	807	2	-9.0494
chr13	13601762	13603312	protein_coding	Nid1	utr3	ENSMUSG00000005397	ProperStrand	112	chr9	15119287	15119426	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	2	-6.5900
mmu-miR-6240	3	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr6	95079427	95079443	protein_coding	Kbtbd8	utr3	ENSMUSG00000030031	ProperStrand	26	1	-7.5698
chr4	33333116	33333194	protein_coding	Pnrc1	exon	ENSMUSG00000040128	ProperStrand	27	chr15	57978223	57978297	snoRNA	ENSMUSG00000080461_SNORA11	.	ENSMUSG00000080461	ProperStrand	171	1	-12.8272
mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr17	23959132	23959218	protein_coding	Srrm2	intron	ENSMUSG00000039218	ProperStrand	521	1	-1.9447
chr15	78859398	78859477	pseudogene	H1f0	.	ENSMUSG00000048769	ProperStrand	6	chr9	15119650	15119740	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-7.1405
chr11	62416578	62416641	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	chr9	15120963	15121033	snoRNA	ENSMUSG00000065265_SNORA32	.	ENSMUSG00000065265	ProperStrand	101	1	-4.1682
chr4	132530099	132530117	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	chr12	17552949	17553015	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-1.7696
chr1	72871107	72871164	protein_coding	Igfbp2	utr5	ENSMUSG00000039323	ProperStrand	406	chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	1	-5.6980
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr11	83107825	83107904	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	3	-11.6491
chr2	168766270	168766288	protein_coding	Zfp64	exon	ENSMUSG00000027551	NonProperStrand	10	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-6.6888
chr17	13112450	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	chr18	35714143	35714260	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	28	-2.1118
chr7	107236647	107238246	protein_coding	Pold3	exon	ENSMUSG00000030726	ProperStrand	14	chr11	55296216	55296296	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-9.1141
chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	chr4	116828379	116828453	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-4.5896
chr7	24779190	24779213	SINE	ID_B1	B4	chr7ID_B124779183	NonProperStrand	54	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-8.3902
chr10	61325507	61325796	protein_coding	Col13a1	exon	ENSMUSG00000058806	ProperStrand	120	chr2	91436228	91436261	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-6.1251
chr13	8766528	8766602	protein_coding	Adarb2	utr3	ENSMUSG00000052551	NonProperStrand	61	chr8	73419657	73419737	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	6	-16.7572
chr7	30184965	30185045	protein_coding	Sipa1l3	utr5	ENSMUSG00000030583	NonProperStrand	19	chr16	57391627	57391717	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	1	-12.6385
chr6	85388876	85389659	protein_coding	Smyd5	exon	ENSMUSG00000033706	ProperStrand	107	chr4	131908824	131908896	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-2.0537
chr5	32122875	32122955	protein_coding	Bre	exon	ENSMUSG00000052139	ProperStrand	33	chr11	6428035	6428150	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	7	-20.2991
chr2	127317007	127317024	protein_coding	Kcnip3	intron	ENSMUSG00000079056	NonProperStrand	18	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.5840
chr8	13416897	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr11	6520320	6520458	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	1	-1.4055
chr8	36529522	36529538	protein_coding	Eri1	utr3	ENSMUSG00000031527	NonProperStrand	97	chr19	40342603	40342625	protein_coding	Pdlim1	intron	ENSMUSG00000055044	NonProperStrand	1	1	-inf
chr18	10052132	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr4	147385125	147385141	protein_coding	Clcn6	exon	ENSMUSG00000029016	ProperStrand	120	2	-11.8849
chr13	94971563	94971611	protein_coding	Scamp1	utr3	ENSMUSG00000021687	ProperStrand	9	chr6	38541317	38541417	protein_coding	Luc7l2	exon	ENSMUSG00000029823	ProperStrand	85	1	-16.4946
chr4	28799140	28862863	protein_coding	Epha7	exon	ENSMUSG00000028289	ProperStrand	6	chr11	4382634	4382710	protein_coding	Mtmr3	utr3	ENSMUSG00000034354	ProperStrand	25	2	-19.5175
chr16	23111743	23111823	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	chr12	60235047	60235137	snoRNA	ENSMUSG00000077505_SNORA26	.	ENSMUSG00000077505	ProperStrand	82	1	-1.4298
chr14	76916299	76916399	lincRNA	4930444M15Rik	intron	ENSMUSG00000085974	NonProperStrand	14	chr5	111121066	111121094	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-9.3726
chr1	127923309	127923325	protein_coding	Nckap5	exon	ENSMUSG00000049690	ProperStrand	11	chr3	123210883	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.2109
chr14	65345948	65347074	protein_coding	Kif13b	exon	ENSMUSG00000060012	ProperStrand	37	chr17	35089181	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-6.4386
chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	chr11	69481333	69481392	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-1.8237
chr7	28421172	28421284	protein_coding	Akt2	exon	ENSMUSG00000004056	ProperStrand	100	chr6	71832629	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-4.6217
chr8	91343853	91343872	DNA	Charlie10	MER1_type	chr8Charlie1091343828	ProperStrand	23	chr4	131908303	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.9964
chr1	191694403	191694483	protein_coding	Ptpn14	utr3	ENSMUSG00000026604	ProperStrand	74	chr3	58349158	58349248	protein_coding	Eif2a	exon	ENSMUSG00000027810	ProperStrand	11	1	-16.3855
chr10	99923613	99923629	protein_coding	Tmtc3	exon	ENSMUSG00000036676	NonProperStrand	9	chr16	23110913	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.9939
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr10	90582409	90584724	protein_coding	Slc25a3	exon	ENSMUSG00000061904	ProperStrand	74	1	-4.5509
chr2	181216145	181216235	LINE	L1_Mus3	L1	chr2L1_Mus3181216141	NonProperStrand	1	chr11	105001861	105001941	SINE	B1_Mm	Alu	chr11B1_Mm105001833	NonProperStrand	2	1	-inf
chr16	23111596	23111898	protein_coding	Eif4a2	intron	ENSMUSG00000022884	ProperStrand	356	chr16	23111682	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	31	-19.2964
chr2	32817292	32817320	protein_coding	Rpl12	utr5	ENSMUSG00000038900	ProperStrand	167	chr9	120039550	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.5989
chr8	55739263	55739279	protein_coding	Wdr17	exon	ENSMUSG00000039375	NonProperStrand	2	chr11	48614367	48614434	snoRNA	ENSMUSG00000064500_SNORD95	.	ENSMUSG00000064500	ProperStrand	100	1	-inf
chr15	76428455	76429255	protein_coding	Cpsf1	exon	ENSMUSG00000034022	ProperStrand	127	chr19	8963096	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-2.2178
chr1	164504541	164508012	protein_coding	Vamp4	exon	ENSMUSG00000026696	ProperStrand	4	chr11	97642978	97643038	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-7.8635
chr14	31867350	31867368	protein_coding	Pbrm1	exon	ENSMUSG00000042323	ProperStrand	87	chrX	84483703	84483741	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-7.5076
chr18	25361887	25361904	protein_coding	AW554918	intron	ENSMUSG00000033632	ProperStrand	23	chr10	23505152	23505235	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.7622
chr11	17133034	17133124	protein_coding	Wdr92	utr3	ENSMUSG00000078970	ProperStrand	8	chr16	23110909	23110989	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.2180
chr11	57318853	57320379	protein_coding	Fam114a2	exon	ENSMUSG00000020523	ProperStrand	25	chr1	162967489	162967509	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-5.1443
chr13	9833544	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr7	105241581	105241681	protein_coding	Myo7a	intron	ENSMUSG00000030761	NonProperStrand	33	1	-6.1269
chr5	30387222	30387312	protein_coding	Tyms	utr3	ENSMUSG00000025747	NonProperStrand	6	chr17	35521422	35521512	protein_coding	H2-Q4	utr3	ENSMUSG00000035929	ProperStrand	3	1	-inf
chr6	54379743	54379760	lincRNA	9130019P16Rik	exon	ENSMUSG00000073067	ProperStrand	255	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-4.4502
chr9	56343834	56343914	protein_coding	Hmg20a	utr3	ENSMUSG00000032329	ProperStrand	87	chr7	117189971	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.6703
chr17	4082954	4082993	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr14	76247778	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-1.3308
mmu-miR-6240	1	26	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr18	33954814	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	35	-19.6498
chr1	183853750	183853767	protein_coding	Enah	exon	ENSMUSG00000022995	NonProperStrand	33	chr16	23109052	23109090	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-8.4801
chr8	99395965	99395983	LTR	RMER2	ERV1	chr8RMER299395756	NonProperStrand	6	chr4	131908809	131908896	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.3738
chr5	117827947	117828003	protein_coding	Wsb2	utr3	ENSMUSG00000029364	NonProperStrand	9	chr1	59761161	59761180	snoRNA	ENSMUSG00000089512_SNORD11	.	ENSMUSG00000089512	ProperStrand	43	1	-17.8687
chr18	36446818	36446872	protein_coding	Pura	exon	ENSMUSG00000043991	ProperStrand	20	chr2	166890503	166890567	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	2	-15.4764
chr13	24844080	24845299	protein_coding	Gmnn	exon	ENSMUSG00000006715	ProperStrand	7	chr3	58648140	58648156	protein_coding	Clrn1	utr3	ENSMUSG00000043850	NonProperStrand	13	1	-20.5261
chr17	28194276	28194355	protein_coding	Anks1	exon	ENSMUSG00000024219	ProperStrand	32	chr8	74446729	74446745	protein_coding	Zfp617	intron	ENSMUSG00000066880	NonProperStrand	208	1	-12.0892
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr4	155367405	155367431	protein_coding	Sdf4	utr5	ENSMUSG00000029076	ProperStrand	20	1	-9.2402
chr14	29145002	29145092	protein_coding	Erc2	intron	ENSMUSG00000040640	ProperStrand	31	chr9	120038551	120038631	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	8	-20.5959
chrX	135870200	135870262	protein_coding	Trap1a	intron	ENSMUSG00000051257	ProperStrand	66	chr16	23111384	23111474	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.1306
chr18	34429683	34429700	protein_coding	Apc	intron	ENSMUSG00000005871	ProperStrand	64	chr8	32260334	32260421	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	2	-7.4962
chr6	122681457	122681557	protein_coding	Slc2a3	exon	ENSMUSG00000003153	ProperStrand	682	chr7	148634763	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-0.8668
chr8	85276549	85276566	LTR	IAP-d-int	ERVK	chr8IAP-d-int85276155	ProperStrand	26	chr10	110918634	110918673	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-5.0402
chr2	32818887	32818952	protein_coding-noncoding	Rpl12	utr5	ENSMUSG00000038900	ProperStrand	68	chr7	28189457	28189473	protein_coding	Spnb4	exon	ENSMUSG00000011751	ProperStrand	39	1	-13.9249
chrX	71589891	71589907	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr17	13112511	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-1.7832
chr1	72272840	72272930	snRNA	ENSMUSG00000075752_U2	.	ENSMUSG00000075752	ProperStrand	535	chr14	76247753	76247791	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	4	-3.5774
chr8	93933139	93933212	protein_coding	Fto	exon	ENSMUSG00000055932	ProperStrand	34	chr18	33954817	33954907	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	4	-14.5937
chr7	95266597	95266613	protein_coding	Grm5	intron	ENSMUSG00000049583	NonProperStrand	145	chr12	88778635	88778692	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-4.7758
chr12	111866192	111866261	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr4	53873606	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	1	-4.3714
chr2	129998643	129998703	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr11	98878376	98878467	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-1.5668
chr1	8889901	8889917	protein_coding	Sntg1	intron	ENSMUSG00000025909	ProperStrand	8	chr1	155096726	155096816	protein_coding	Lamc1	exon	ENSMUSG00000026478	ProperStrand	239	1	-14.6767
chr1	102076713	102076790	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	chr12	112779208	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-1.4051
chrX	158274965	158274981	protein_coding	Nhs	exon	ENSMUSG00000059493	NonProperStrand	50	chr9	120038613	120038656	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.3693
chr19	5609826	5609844	protein_coding	Kat5	intron	ENSMUSG00000024926	ProperStrand	20	chr10	78954821	78954837	protein_coding	Vmn2r83	exon	ENSMUSG00000091381	ProperStrand	6	1	-19.1876
chr8	72627855	72627935	protein_coding	Ncan	exon	ENSMUSG00000002341	ProperStrand	8	chr18	33954830	33954920	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-7.4981
chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr19	29678580	29678596	protein_coding	C030046E11Rik	exon	ENSMUSG00000038658	ProperStrand	104	1	-5.3750
chr14	76247710	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	chr11	51551285	51551424	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	10	-7.8400
chr16	56035865	56036001	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	chr4	131908236	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	8	-0.7884
chr2	65376282	65376298	protein_coding	Scn3a	intron	ENSMUSG00000057182	ProperStrand	26	chr17	35089182	35089232	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-7.1445
chr2	61617432	61617522	protein_coding	Psmd14	intron	ENSMUSG00000026914	ProperStrand	16	chr18	60429092	60429172	protein_coding	Gm4841	utr3	ENSMUSG00000068606	NonProperStrand	2	1	-inf
chr11	119136228	119136244	protein_coding	Gaa	exon	ENSMUSG00000025579	NonProperStrand	201	chr11	106362640	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-5.0301
chr3	156978201	156978217	protein_coding	Negr1	utr3	ENSMUSG00000040037	NonProperStrand	25	chr4	131865914	131865978	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.2649
chr8	25171371	25171387	protein_coding	Zmat4	utr3	ENSMUSG00000037492	ProperStrand	18	chr16	23111705	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-6.8529
chr5	122773160	122773177	protein_coding	Pptc7	utr3	ENSMUSG00000038582	NonProperStrand	19	chr8	14958605	14961163	protein_coding	Arhgef10	exon	ENSMUSG00000071176	ProperStrand	22	1	-17.5893
chr16	32778950	32778967	protein_coding	Muc20	utr3	ENSMUSG00000035638	ProperStrand	7	chr1	162967734	162967806	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	1	-14.6833
chr7	51097700	51097718	protein_coding	Klk5	exon	ENSMUSG00000074155	ProperStrand	29	chr16	23111451	23111505	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.3903
chr13	97881340	97881390	protein_coding	Fam169a	intron	ENSMUSG00000041817	ProperStrand	12	chr16	23110453	23110526	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-9.1103
chr7	3590269	3590468	protein_coding	Prpf31	exon	ENSMUSG00000008373	ProperStrand	17	chr16	23111755	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	6	-21.7380
chr2	181450622	181451208	protein_coding	Oprl1	exon	ENSMUSG00000027584	ProperStrand	32	chr10	23505204	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.1928
chr18	75162469	75162502	protein_coding	Rpl17	exon	ENSMUSG00000062328	ProperStrand	90	chr4	131865855	131865973	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	5	-6.9795
chr11	115883846	115883900	protein_coding	H3f3b	utr3	ENSMUSG00000016559	ProperStrand	76	chr7	135862423	135862441	protein_coding	Mcmbp	intron	ENSMUSG00000048170	ProperStrand	87	1	-12.0912
chr15	11321633	11321733	protein_coding	Tars	intron	ENSMUSG00000022241	ProperStrand	121	chr17	24857830	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.2244
chr6	125113054	125113172	protein_coding	Gapdh	exon	ENSMUSG00000057666	ProperStrand	356	chr17	24856676	24856740	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-3.0408
chr11	70468113	70468132	protein_coding	Pfn1	utr5	ENSMUSG00000018293	ProperStrand	55	chr17	88045528	88045546	protein_coding	Epcam	exon	ENSMUSG00000045394	ProperStrand	43	1	-14.1623
chr5	140276370	140276460	protein_coding	Mafk	exon	ENSMUSG00000018143	ProperStrand	4	chr7	4763013	4763093	protein_coding	Ube2s	exon	ENSMUSG00000060860	ProperStrand	62	1	-19.6217
chr6	145564547	145568173	protein_coding	Tuba3b	exon	ENSMUSG00000067338	ProperStrand	152	chr5	130300419	130300550	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-2.1280
chr1	174048157	174048190	protein_coding	Copa	exon	ENSMUSG00000026553	ProperStrand	33	chr14	121649972	121649992	sense_intronic	B930095G15Rik	.	ENSMUSG00000085133	ProperStrand	1	1	-inf
chr19	5105016	5105116	protein_coding	Rab1b	intron	ENSMUSG00000024870	ProperStrand	133	chr19	8798507	8798553	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-3.6975
chr8	24353034	24355213	protein_coding	Golga7	utr3	ENSMUSG00000015341	ProperStrand	36	chr4	147320805	147320895	protein_coding	2510039O18Rik	utr3	ENSMUSG00000044496	ProperStrand	28	1	-15.8929
chr2	89368462	89368478	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	chr19	8963027	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	8	-7.2182
chr6	113059787	113059841	protein_coding-noncoding	Setd5	utr5	ENSMUSG00000034269	ProperStrand	5	chr12	60141322	60141412	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	3	-20.7587
chr8	87387971	87387987	protein_coding	Farsa	exon	ENSMUSG00000003808	ProperStrand	21	chr7	109830472	109830488	protein_coding	Trim68	intron	ENSMUSG00000073968	ProperStrand	23	1	-17.1575
chr17	39979944	39980009	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr6	96322858	96322874	protein_coding	Fam19a1	intron	ENSMUSG00000059187	NonProperStrand	60	1	-7.2232
chr5	114881303	114881358	protein_coding	Mmab	utr3	ENSMUSG00000029575	ProperStrand	1	chr1	162966011	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-inf
chr11	106362336	106362378	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	chr9	64143753	64143824	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-1.0234
chr19	22926633	22926666	protein_coding	Trpm3	intron	ENSMUSG00000052387	ProperStrand	54	chr16	23110829	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-3.7740
chr8	81029654	81029678	protein_coding	Rbmxl1	exon	ENSMUSG00000037070	ProperStrand	13	chr2	158182234	158182278	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-8.0614
chr13	109124443	109124465	protein_coding	Depdc1b	intron	ENSMUSG00000021697	NonProperStrand	3	chr2	26494768	26494829	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-9.2771
chrX	98632649	98632709	protein_coding	Nono	exon	ENSMUSG00000031311	ProperStrand	102	chr1	88247743	88247776	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	2	-6.8415
chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	chr14	122373357	122373375	protein_coding	Ubac2	intron	ENSMUSG00000041765	ProperStrand	25	1	-12.5348
chr6	82866715	82866732	protein_coding	Sema4f	utr3	ENSMUSG00000000627	ProperStrand	14	chr11	115025194	115025240	protein_coding	Slc9a3r1	exon	ENSMUSG00000020733	ProperStrand	7	1	-inf
chr18	17231687	17231777	lincRNA	1700001G01Rik	intron	ENSMUSG00000087170	ProperStrand	1	chr2	98507268	98507348	protein_coding	Gm10800	exon	ENSMUSG00000075014	ProperStrand	7	1	-inf
chr2	164461589	164461606	protein_coding	Wfdc16	intron	ENSMUSG00000070530	ProperStrand	15	chr18	33954816	33954890	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-6.1972
chr9	107560992	107561009	protein_coding	Slc38a3	exon	ENSMUSG00000010064	NonProperStrand	2	chr4	119941547	119941564	protein_coding	Foxo6	exon	ENSMUSG00000052135	ProperStrand	31	1	-inf
chr9	15120969	15121069	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	chr17	35088957	35089001	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-2.5094
chr2	30684125	30684142	protein_coding	Asb6	utr5	ENSMUSG00000039483	NonProperStrand	5	chr15	34370630	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-13.9907
chr8	60567299	60788894	protein_coding	Galntl6	intron	ENSMUSG00000061864	NonProperStrand	25	chr5	121655011	121655100	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-8.9375
chr6	114260511	114260527	protein_coding	Slc6a1	exon	ENSMUSG00000030310	NonProperStrand	147	chr7	29136525	29136580	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.0231
chr4	43505712	43505792	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr17	29169668	29173212	protein_coding	Srsf3	utr5	ENSMUSG00000071172	ProperStrand	23	1	-4.8772
chr10	90616144	90616219	protein_coding	Tmpo	intron	ENSMUSG00000019961	ProperStrand	57	chr5	130300437	130300527	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	6	-14.8583
chr19	44188486	44188548	snoRNA	ENSMUSG00000077391_SNORA12	.	ENSMUSG00000077391	ProperStrand	506	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	3	-1.7648
chr5	110752570	110752586	protein_coding	Pole	exon	ENSMUSG00000007080	NonProperStrand	1	chr8	19891637	19891762	pseudogene	6820431F20Rik	.	ENSMUSG00000071796	ProperStrand	4	1	-inf
chr2	74506499	74506515	protein_coding	Hoxd13	exon	ENSMUSG00000001819	ProperStrand	2	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-19.2741
chr7	99758068	99758087	protein_coding-noncoding	Ankrd42	utr3	ENSMUSG00000041343	ProperStrand	1	chr10	127020511	127020887	protein_coding	Lrp1	exon	ENSMUSG00000040249	NonProperStrand	24	1	-inf
chr8	4243833	4243981	protein_coding	Map2k7	exon	ENSMUSG00000002948	ProperStrand	32	chr5	130300455	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.6387
chr10	126895896	126895950	protein_coding	R3hdm2	exon	ENSMUSG00000025404	ProperStrand	33	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-9.3816
chr1	75214284	75214348	protein_coding	Tuba4a	intron	ENSMUSG00000026202	ProperStrand	20	chrX	34622947	34623037	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-5.2611
chr7	129059283	129060041	protein_coding	Scnn1b	exon	ENSMUSG00000030873	ProperStrand	26	chr7	116664793	116664859	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-4.0736
chr1	34093239	34093256	protein_coding	Dst	intron	ENSMUSG00000026131	NonProperStrand	12	chr10	23505598	23505626	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-10.8214
chr1	45488603	45488620	protein_coding	Col5a2	intron	ENSMUSG00000026042	ProperStrand	184	chr7	13516146	13516171	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	1	-6.4397
chr12	31589743	31589823	protein_coding	Acp1	exon	ENSMUSG00000044573	ProperStrand	12	chr8	73419657	73419747	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-6.2451
chr9	45198928	45199653	protein_coding	Fxyd6	exon	ENSMUSG00000066705	NonProperStrand	108	chr11	62418014	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-4.4222
chr11	120049842	120049932	lincRNA	2810410L24Rik	exon	ENSMUSG00000075389	ProperStrand	3	chr16	23110905	23110985	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr1	167800584	167800684	protein_coding	Pou2f1	utr3	ENSMUSG00000026565	ProperStrand	34	chr5	130300496	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	4	-11.8764
chr15	79362171	79362206	protein_coding	Ddx17	exon	ENSMUSG00000055065	ProperStrand	140	chr8	113366286	113366354	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	6	-inf
chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-2.8271
chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-1.7918
chr17	24858782	24858825	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr1	59761674	59761716	snoRNA	ENSMUSG00000089093_Snord11	.	ENSMUSG00000089093	ProperStrand	193	2	-11.7371
chr14	106508058	106508076	protein_coding	Trim52	utr3	ENSMUSG00000022113	NonProperStrand	10	chr16	23110828	23110890	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-10.6073
chr11	50196884	50196901	protein_coding	Hnrnph1	intron	ENSMUSG00000007850	NonProperStrand	1	chr4	131865855	131865963	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr15	46379810	46379826	LTR	MMERVK10C-int	ERVK	chr15MMERVK10C-int46379504	NonProperStrand	15	chr1	52289631	52289731	protein_coding	Gls	exon	ENSMUSG00000026103	ProperStrand	56	1	-16.2662
chr13	24064747	24064770	protein_coding	Scgn	intron	ENSMUSG00000021337	ProperStrand	16	chr9	78327912	78328048	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-8.9956
chr15	82980101	82980189	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr1	59761671	59761714	snoRNA	ENSMUSG00000089093_Snord11	.	ENSMUSG00000089093	ProperStrand	193	1	-4.8506
chr16	17044714	17044804	protein_coding	Mapk1	utr3	ENSMUSG00000063358	ProperStrand	67	chr11	97642979	97643059	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.2853
chr17	85407707	85407748	protein_coding	Ppm1b	intron	ENSMUSG00000061130	ProperStrand	36	chr16	23111741	23111775	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.7618
chr2	146125208	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	chr16	20679579	20679651	protein_coding	Eif4g1	exon	ENSMUSG00000045983	ProperStrand	199	1	-8.6643
chr2	152960378	152960468	protein_coding	Hck	exon	ENSMUSG00000003283	ProperStrand	8	chr19	8800378	8800458	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-7.5245
chr7	31267428	31267494	protein_coding	Nphs1	intron	ENSMUSG00000006649	ProperStrand	22	chr2	158185575	158185665	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-8.4984
chr2	25290605	25290705	protein_coding	Abca2	exon	ENSMUSG00000026944	ProperStrand	57	chr17	35299507	35299559	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-4.8762
chr14	75985039	75985056	protein_coding	Spert	intron	ENSMUSG00000034913	ProperStrand	11	chr15	79912119	79912140	protein_coding	Rpl3	exon	ENSMUSG00000060036	ProperStrand	8342	1	-6.9253
chr7	51505822	51505892	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	chr7	51505509	51505592	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	1	-4.1796
chr2	68186275	68186355	protein_coding	Stk39	intron	ENSMUSG00000027030	ProperStrand	12	chr2	104818104	104818194	protein_coding	Ccdc73	intron	ENSMUSG00000045106	ProperStrand	13	1	-19.4752
chr7	52309977	52309993	protein_coding	Prrg2	exon	ENSMUSG00000007837	NonProperStrand	281	chr15	96226252	96226268	protein_coding	Arid2	intron	ENSMUSG00000033237	ProperStrand	34	1	-11.3649
chr2	164996130	164996147	protein_coding	Cdh22	exon	ENSMUSG00000053166	ProperStrand	7	chr19	8798484	8798513	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-9.5818
chr15	89128835	89128925	protein_coding	Sbf1	intron	ENSMUSG00000036529	ProperStrand	85	chr2	26494740	26494820	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	17	-19.2779
chr11	87240282	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	chr15	34370545	34370644	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-2.9464
chr13	35023112	35023134	protein_coding	4933417A18Rik	intron	ENSMUSG00000021415	NonProperStrand	1	chr11	97643127	97643165	protein_coding	Rpl23	exon	ENSMUSG00000071415	ProperStrand	920	1	-inf
chr16	52489663	52489681	LTR	MLT1A0	MaLR	chr16MLT1A052489578	ProperStrand	1	chr1	162965531	162965599	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-inf
chr11	32500864	32503675	protein_coding	Stk10	exon	ENSMUSG00000020272	NonProperStrand	73	chr2	91613185	91613203	protein_coding	Ambra1	exon	ENSMUSG00000040506	ProperStrand	65	1	-12.7589
chr7	52722134	52722157	protein_coding	Bax	utr5	ENSMUSG00000003873	ProperStrand	24	chr8	73419705	73419749	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.8583
chr2	29936012	29936087	protein_coding-noncoding	Pkn3	utr5	ENSMUSG00000026785	ProperStrand	1	chr19	8800359	8800449	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-inf
chr8	73058056	73058080	protein_coding	Fkbp8	exon	ENSMUSG00000019428	ProperStrand	52	chr9	120039555	120039622	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	3	-8.8963
chr6	73210479	73210569	protein_coding	Suclg1	exon	ENSMUSG00000052738	ProperStrand	12	chr4	131908247	131908718	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.2270
chr15	81354775	81354791	SINE	B3A	B2	chr15B3A81354761	ProperStrand	16	chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	1	-14.0585
chr10	75399061	75399093	protein_coding	Chchd10	exon	ENSMUSG00000049422	ProperStrand	140	chr9	15119646	15119713	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-2.4680
chr17	23956714	23956776	protein_coding	Srrm2	utr3	ENSMUSG00000039218	ProperStrand	521	chr12	106269342	106269442	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-0.7033
chr1	185898178	185898196	protein_coding	Dusp10	exon	ENSMUSG00000039384	NonProperStrand	3	chr1	9713172	9713250	protein_coding	Vcpip1	utr3	ENSMUSG00000045210	ProperStrand	34	2	-inf
chr15	72924194	72924294	protein_coding	Chrac1	utr3	ENSMUSG00000068391	ProperStrand	8	chr19	8799860	8799899	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	6	-19.2516
chr5	136385192	136385292	protein_coding	Ywhag	utr3	ENSMUSG00000051391	ProperStrand	142	chr18	35716846	35716881	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-0.9209
chr10	23505193	23505220	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	chr5	135529857	135529987	snoRNA	ENSMUSG00000088008_SCARNA20	.	ENSMUSG00000088008	ProperStrand	139	4	-2.2525
chr18	82662186	82662202	protein_coding	Mbp	intron	ENSMUSG00000041607	NonProperStrand	185	chr6	71832577	71832687	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-3.4690
chr2	32818850	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	chr6	70805467	70805547	snoRNA	ENSMUSG00000065750_SNORA5	.	ENSMUSG00000065750	ProperStrand	165	1	-3.5464
chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	chr11	6428089	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.0574
chr12	112885761	112885820	protein_coding	Mark3	exon	ENSMUSG00000007411	ProperStrand	37	chr6	83004437	83004453	protein_coding	Htra2	utr5	ENSMUSG00000068329	ProperStrand	17	1	-16.8449
chr11	5737599	5737615	protein_coding	Polm	exon	ENSMUSG00000020474	NonProperStrand	19	chr19	8963153	8963183	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.3710
chr4	116875175	116875248	snRNA	ENSMUSG00000070228_U5	.	ENSMUSG00000070228	ProperStrand	131	chr17	13112532	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-3.1262
chr4	123125491	123127241	protein_coding	Macf1	exon	ENSMUSG00000028649	ProperStrand	320	chr1	162967519	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-0.8452
chr11	69548962	69549042	protein_coding	Polr2a	exon	ENSMUSG00000005198	ProperStrand	200	chr6	116174993	116176473	protein_coding	D6Wsu116e	exon	ENSMUSG00000024104	ProperStrand	21	13	-19.2133
chr3	89354340	89354357	protein_coding	Kcnn3	intron	ENSMUSG00000000794	NonProperStrand	38	chr16	23110962	23110999	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.7634
chr5	73189869	73189885	protein_coding	Tec	intron	ENSMUSG00000029217	NonProperStrand	23	chr16	23111381	23111417	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.7951
chr11	72730046	72730062	protein_coding	Zzef1	exon	ENSMUSG00000055670	NonProperStrand	16	chr16	23111701	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-14.1016
chr18	60936592	60936612	protein_coding	Rps14	exon	ENSMUSG00000024608	ProperStrand	154	chr7	133573296	133579274	protein_coding	Rabep2	exon	ENSMUSG00000030727	ProperStrand	5	2	-19.8482
chr18	10052129	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr2	181316563	181316579	protein_coding	Uckl1	exon	ENSMUSG00000089917	ProperStrand	142	2	-11.3810
chr13	81814877	81814957	protein_coding	Polr3g	utr3	ENSMUSG00000035834	ProperStrand	14	chr9	78326977	78327152	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-9.2710
chr6	5992226	5992326	protein_coding	Slc25a13	exon	ENSMUSG00000015112	ProperStrand	78	chr1	162967516	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-2.9992
chr2	90235307	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	102853012	102853030	protein_coding	Slc35d1	intron	ENSMUSG00000028521	ProperStrand	33	1	-5.6244
chr3	152450608	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	chr3	88497864	88497981	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-3.1321
chr19	8800084	8800121	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	2	-1.8646
chrX	11635848	11635865	protein_coding	Bcor	exon	ENSMUSG00000040363	NonProperStrand	293	chr11	98878344	98878371	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-3.2597
chr5	46084410	46084453	protein_coding	Ncapg	exon	ENSMUSG00000015880	ProperStrand	36	chr3	88497882	88497982	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-8.4838
chr1	45488603	45488620	protein_coding	Col5a2	intron	ENSMUSG00000026042	ProperStrand	184	chr2	130101972	130102056	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-3.2411
chr2	105506706	105506722	antisense	Pax6os1	.	ENSMUSG00000086029	ProperStrand	5	chr10	23505193	23505274	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	NonProperStrand	45	2	-19.6659
chr2	158672722	158675257	protein_coding	Dhx35	exon	ENSMUSG00000027655	ProperStrand	37	chr16	96391544	96391613	protein_coding	Lca5l	intron	ENSMUSG00000045275	NonProperStrand	210	2	-18.5299
chr6	88435849	88435865	protein_coding	Ruvbl1	exon	ENSMUSG00000030079	NonProperStrand	54	chr7	29136525	29136626	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.5445
chr18	56686612	56686660	protein_coding	Aldh7a1	exon	ENSMUSG00000053644	ProperStrand	14	chr14	76247736	76247836	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-7.0446
chr3	101390195	101390747	protein_coding	Atp1a1	exon	ENSMUSG00000033161	ProperStrand	316	chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	1	-5.5416
chr7	29344689	29344779	protein_coding	Pak4	exon	ENSMUSG00000030602	ProperStrand	18	chr2	146168350	146168430	protein_coding	Ralgapa2	exon	ENSMUSG00000037110	ProperStrand	35	1	-16.8501
chr17	33961250	33961279	protein_coding	Rps28	exon	ENSMUSG00000067288	ProperStrand	52	chr10	39978350	39978440	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	3	-13.3043
chr8	40847202	40847292	LINE	Lx	L1	chr8Lx40847143	ProperStrand	1	chr8	40847084	40847164	LTR	RLTR19	ERVK	chr8RLTR1940846891	NonProperStrand	1	1	-inf
chr11	120294405	120294422	protein_coding	Nploc4	exon	ENSMUSG00000039703	ProperStrand	44	chr15	79913305	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.1738
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr5	118376503	118376519	protein_coding	Nos1	exon	ENSMUSG00000029361	NonProperStrand	237	1	-8.6198
chr8	73115965	73116055	protein_coding	Ell	utr3	ENSMUSG00000070002	ProperStrand	32	chr7	116664809	116664889	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.6812
chr10	79879959	79880062	protein_coding	Tcf3	exon	ENSMUSG00000020167	NonProperStrand	24	chr8	113579262	113579406	protein_coding	Aars	utr3	ENSMUSG00000031960	ProperStrand	355	1	-11.6058
chr4	9531719	9534960	protein_coding	Asph	exon	ENSMUSG00000028207	ProperStrand	14	chr10	23505193	23505279	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.6795
chr2	119120130	119120146	protein_coding	Vps18	exon	ENSMUSG00000034216	NonProperStrand	40	chr4	132621642	132621663	protein_coding	Ahdc1	exon	ENSMUSG00000037692	ProperStrand	100	1	-13.1089
chr8	54692710	54694122	protein_coding	Neil3	exon	ENSMUSG00000039396	ProperStrand	14	chr14	76247755	76247793	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	8	-19.4957
chrX	93358826	93359178	protein_coding	Msn	exon	ENSMUSG00000031207	ProperStrand	71	chr16	23111436	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.0362
chr6	47731687	47731723	misc_RNA	Y_RNA	.	ENSMUSG00000064945	ProperStrand	93	chr13	52742450	52742466	protein_coding	Syk	utr3	ENSMUSG00000021457	NonProperStrand	125	1	-10.9585
chr5	23031349	23031366	protein_coding	Srpk2	exon	ENSMUSG00000062604	ProperStrand	51	chr16	23111692	23111753	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	5	-10.5914
chr17	24857752	24857852	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	chr8	113366285	113366338	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	5	-1.3857
chr14	46575461	46575551	lincRNA	Gm15218	intron	ENSMUSG00000085866	ProperStrand	2	chr1	43851395	43851485	protein_coding	Uxs1	intron	ENSMUSG00000057363	NonProperStrand	3	1	-inf
chr7	133210010	133210031	protein_coding	Gsg1l	intron	ENSMUSG00000046182	NonProperStrand	10	chr15	79908995	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-9.0919
chr5	125077278	125077294	protein_coding	Tctn2	utr3	ENSMUSG00000029386	NonProperStrand	22	chr11	62416582	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-11.5475
chr5	110536107	110536178	protein_coding	Gtpbp6	exon	ENSMUSG00000033434	ProperStrand	9	chr11	77996569	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-9.9479
chr5	125202151	125202201	protein_coding	Atp6v0a2	utr3	ENSMUSG00000038023	ProperStrand	31	chr14	56159295	56159312	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	1	-12.2736
chr17	28974840	28974883	protein_coding	Brpf3	utr3	ENSMUSG00000063952	NonProperStrand	2	chr1	162965570	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	NonProperStrand	10	1	-inf
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr4	118951698	118951783	protein_coding	Ybx1	exon	ENSMUSG00000028639	ProperStrand	171	3	-13.2231
chr11	119464726	119464816	protein_coding	Rptor	utr5	ENSMUSG00000025583	ProperStrand	76	chr8	129468759	129468839	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-3.9664
chr12	25742461	25742513	protein_coding	Kidins220	exon	ENSMUSG00000036333	ProperStrand	26	chr1	162966812	162966833	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	2	-12.7009
chr7	52680594	52683873	protein_coding	Ruvbl2	exon	ENSMUSG00000003868	ProperStrand	41	chr19	8963024	8963049	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.9336
chr12	86097893	86097956	protein_coding	Npc2	utr3	ENSMUSG00000021242	ProperStrand	29	chr8	73419696	73419786	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-7.5011
chr10	17635510	17635543	protein_coding	Heca	exon	ENSMUSG00000039879	ProperStrand	13	chr3	123210854	123210917	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	4	-15.7942
chr11	68849041	68849163	protein_coding	1500010J02Rik	exon	ENSMUSG00000020898	ProperStrand	38	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-5.4611
chr9	40612879	40612921	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	chr14	33005095	33005138	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-0.9314
chr2	83693562	83693578	protein_coding	Fam171b	exon	ENSMUSG00000048388	NonProperStrand	175	chr19	8800355	8800410	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-3.1342
chr4	137064291	137064378	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	chr9	106332309	106332653	protein_coding	Rpl29	exon	ENSMUSG00000048758	ProperStrand	45	3	-18.7156
chr2	90235304	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	10614165	10614181	protein_coding	Tmem216	utr3	ENSMUSG00000024667	ProperStrand	27	1	-6.0220
chr18	65142292	65142372	protein_coding	Nedd4l	intron	ENSMUSG00000024589	NonProperStrand	15	chr18	65149828	65149918	protein_coding	Nedd4l	intron	ENSMUSG00000024589	ProperStrand	44	1	-16.8391
chr19	57111637	57111689	protein_coding	Ablim1	utr3	ENSMUSG00000025085	ProperStrand	15	chr10	110918612	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-6.1363
chr2	26264259	26264276	protein_coding	Inpp5e	utr5	ENSMUSG00000026925	ProperStrand	1	chr1	162967514	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-inf
chr8	71636441	71636531	protein_coding	Atp6v1b2	utr3	ENSMUSG00000006273	ProperStrand	29	chr17	24857717	24857797	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.5901
chr14	35543844	35544780	protein_coding	Wapal	exon	ENSMUSG00000041408	ProperStrand	93	chr1	162965552	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-4.4072
chr7	17046289	17046379	protein_coding	Npas1	intron	ENSMUSG00000001988	NonProperStrand	2	chr17	39984831	39985438	pseudogene	AY036118	.	ENSMUSG00000045999	ProperStrand	57	1	-20.8877
chr7	117189955	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	chr4	131866658	131866676	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	5	-3.3045
chr17	35822057	35822257	protein_coding	Ddr1	exon	ENSMUSG00000003534	ProperStrand	129	chr6	11911402	11911419	protein_coding	Phf14	intron	ENSMUSG00000029629	ProperStrand	26	1	-13.4676
chr19	53406810	53406826	protein_coding	Mxi1	intron	ENSMUSG00000025025	ProperStrand	51	chr18	35714246	35714290	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-3.7436
chr5	74489542	74489598	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr1	162968471	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	3	-0.8499
chr3	153575142	153575168	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	chr11	106362339	106362380	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-1.5199
chr9	64023228	64023288	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	chr2	130101245	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	4	-7.7570
chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	chr18	35716763	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-1.9483
mmu-miR-6240	1	18	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr10	80641547	80641637	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	7	-4.7105
chr13	42396835	42396851	protein_coding	Edn1	utr5	ENSMUSG00000021367	NonProperStrand	8	chr16	23110454	23110538	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-6.3329
chr4	147514736	147514753	protein_coding	Mad2l2	utr5	ENSMUSG00000029003	ProperStrand	17	chr1	162967490	162967508	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-5.9112
chr6	85412156	85414828	protein_coding	Cct7	exon	ENSMUSG00000030007	ProperStrand	173	chr13	100205327	100205404	protein_coding	Mtap1b	exon	ENSMUSG00000052727	ProperStrand	76	1	-10.7135
chr11	79846826	79846873	protein_coding	Suz12	utr3	ENSMUSG00000017548	ProperStrand	53	chr10	23505169	23505259	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.4069
chr11	69559446	69559528	protein_coding	Polr2a	exon	ENSMUSG00000005198	ProperStrand	200	chr19	56512738	56512755	protein_coding	Casp7	intron	ENSMUSG00000025076	ProperStrand	6	1	-15.6442
chr13	55422755	55422906	protein_coding	Rab24	exon	ENSMUSG00000034789	ProperStrand	5	chr16	23111757	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-6.6731
chr8	87223595	87223612	protein_coding	Trmt1	exon	ENSMUSG00000001909	NonProperStrand	60	chr3	151885194	151885852	protein_coding	Fubp1	exon	ENSMUSG00000028034	ProperStrand	56	1	-13.4531
chr10	6450631	6450649	protein_coding	Plekhg1	intron	ENSMUSG00000040624	NonProperStrand	75	chr5	121655016	121655096	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.3364
chr9	67241495	67243344	protein_coding	Tln2	exon	ENSMUSG00000052698	ProperStrand	79	chr19	8799847	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-4.4187
chr1	182929955	182930009	protein_coding	Ephx1	exon	ENSMUSG00000038776	ProperStrand	26	chr4	131865924	131865986	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-5.5201
chr16	38887912	38887928	LTR	LTR16E2	ERVL	chr16LTR16E238887600	NonProperStrand	6	mmu-miR-690	1	19	miRNA	mmu-miR-690	.	mmu-miR-690	ProperStrand	63	1	-17.8343
chr2	80297373	80297389	LINE	L1MB8	L1	chr2L1MB880297262	ProperStrand	53	chrX	84483709	84483730	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-8.4975
chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	chr5	115939530	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-6.0119
chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	chr14	51684879	51684922	tRNA	tRNA704-ThrTGT	.	207627	ProperStrand	30	3	-15.0647
chr11	120816713	120819764	protein_coding	Slc16a3	utr3	ENSMUSG00000025161	ProperStrand	98	chr4	131908689	131908892	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-2.2889
chr10	80547618	80547702	protein_coding	Creb3l3	exon	ENSMUSG00000035041	ProperStrand	8	chr4	131908690	131908749	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.7736
chr8	63851536	63852864	protein_coding	Sh3rf1	exon	ENSMUSG00000031642	ProperStrand	50	chr16	17894461	17894477	protein_coding	Tssk1	exon	ENSMUSG00000041566	NonProperStrand	62	1	-13.6174
chr9	72849631	72853474	protein_coding	Ccpg1	exon	ENSMUSG00000034563	ProperStrand	8	chr7	118219592	118219682	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-13.2774
chr5	74489543	74489563	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chrX	130496426	130496668	protein_coding	Sytl4	exon	ENSMUSG00000031255	ProperStrand	169	1	-3.6453
chr16	3979871	3979951	protein_coding	Slx4	exon	ENSMUSG00000039738	ProperStrand	18	chr9	65402827	65402844	protein_coding	Plekho2	utr3	ENSMUSG00000050721	ProperStrand	3	1	-inf
chr8	16615088	16615105	protein_coding	Csmd1	intron	ENSMUSG00000060924	NonProperStrand	25	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.9342
chr4	55431687	55431705	lincRNA	Gm12505	exon	ENSMUSG00000087070	ProperStrand	447	chr3	90332140	90332193	protein_coding	S100a14	utr3	ENSMUSG00000042306	ProperStrand	1	1	-inf
chr6	87438221	87438237	protein_coding	Arhgap25	exon	ENSMUSG00000030047	ProperStrand	7	chr16	23110940	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.4785
chr7	13394104	13394152	protein_coding	Zfp329	utr3	ENSMUSG00000057894	ProperStrand	6	chr4	131908262	131908352	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-5.6461
chr16	55971454	55971520	protein_coding	Rpl24	utr3	ENSMUSG00000022601	ProperStrand	149	chr14	33005038	33005091	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	2	-4.1834
chr14	31381361	31381403	protein_coding	Tkt	exon	ENSMUSG00000021957	ProperStrand	160	chr6	29909524	29909541	protein_coding	Fam40b	utr3	ENSMUSG00000039629	ProperStrand	2	1	-20.5692
chr1	162967544	162967588	non_coding	Gas5	.	ENSMUSG00000053332	ProperStrand	144	chr5	130300490	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-3.5858
chr11	22437446	22437536	LINE	Lx	L1	chr11Lx22436776	ProperStrand	1	chr11	22795670	22795750	protein_coding	Commd1	intron	ENSMUSG00000051355	NonProperStrand	5	1	-inf
chr13	48984525	48984615	protein_coding	Fam120a	exon	ENSMUSG00000038014	ProperStrand	76	chr17	24857767	24857847	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.9111
chrX	12264319	12266463	protein_coding	Med14	exon	ENSMUSG00000064127	NonProperStrand	22	chr10	23505148	23505239	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.8416
chr6	35211395	35211438	lincRNA	1810058I24Rik	exon	ENSMUSG00000073155	ProperStrand	2	chr2	144087324	144087424	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-13.9887
chr13	98263539	98263569	lincRNA	Gm11019	intron	ENSMUSG00000078952	ProperStrand	113	chr1	162965565	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.1758
chr9	36412151	36412168	LINE	L1_Mus3	L1	chr9L1_Mus336412033	ProperStrand	4	chr5	109135781	109135896	protein_coding	Fgfrl1	utr3	ENSMUSG00000008090	ProperStrand	111	4	-inf
chr1	59539683	59539700	protein_coding	Fzd7	utr5	ENSMUSG00000041075	ProperStrand	373	chr1	102076759	102076790	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	1	-5.8110
chr15	31226074	31226090	protein_coding	Ankrd33b	utr3	ENSMUSG00000022237	ProperStrand	55	chr1	162966812	162966851	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-6.4309
chr19	22926633	22926662	protein_coding	Trpm3	intron	ENSMUSG00000052387	ProperStrand	54	chr10	23505152	23505255	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.3802
chr17	15957638	15957738	protein_coding	Rgmb	exon	ENSMUSG00000048027	ProperStrand	5	chr7	116664858	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-7.4478
chr5	142281100	142281118	protein_coding	Sdk1	intron	ENSMUSG00000039683	NonProperStrand	21	chr4	131865855	131865907	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.5891
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr5	23825941	23825957	protein_coding	Kcnh2	exon	ENSMUSG00000038319	ProperStrand	242	1	-5.8305
chrX	159218739	159218756	protein_coding	Txlng	utr3	ENSMUSG00000038344	ProperStrand	45	chr10	23505221	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.6487
chr10	105010980	105010997	protein_coding	Tmtc2	utr5	ENSMUSG00000036019	ProperStrand	72	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-6.8718
chr12	119352405	119352421	protein_coding	Dnahc11	exon	ENSMUSG00000018581	ProperStrand	65	chr15	80365066	80365083	protein_coding	Enthd1	exon	ENSMUSG00000050439	NonProperStrand	5	1	-18.0233
chr6	114260511	114260527	protein_coding	Slc6a1	exon	ENSMUSG00000030310	NonProperStrand	147	chr2	144087414	144087460	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-4.7961
chr9	37460744	37461836	protein_coding	Tbrg1	exon	ENSMUSG00000011114	ProperStrand	56	chr1	173041632	173041649	tRNA	tRNA710-ValCAC	.	1221062	ProperStrand	206	1	-10.9782
chr11	113693679	113693697	protein_coding	Sdk2	exon	ENSMUSG00000041592	NonProperStrand	98	chr4	3762227	3762299	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	1	-8.5063
chr2	11404130	11404194	protein_coding	Pfkfb3	exon	ENSMUSG00000026773	ProperStrand	27	chr3	108357592	108357663	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-6.1017
chr5	151369541	151369631	protein_coding	Brca2	exon	ENSMUSG00000041147	ProperStrand	75	chr7	117189980	117190060	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.9308
chr2	162909017	162909084	protein_coding	Mybl2	utr3	ENSMUSG00000017861	ProperStrand	230	chr8	32260335	32260385	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-2.2008
chr10	75140630	75140706	protein_coding	Cabin1	intron	ENSMUSG00000020196	ProperStrand	62	chr16	23110908	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-1.3855
chr5	64318439	64318455	protein_coding	Rell1	exon	ENSMUSG00000047881	NonProperStrand	4	chr16	23110455	23110519	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-7.8518
chr9	110869080	110872532	protein_coding	Lrrc2	exon	ENSMUSG00000032495	ProperStrand	8	chr9	120038520	120038610	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-6.9869
chr4	116826502	116828176	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	chr7	116663637	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	6	-5.2813
chr11	70795795	70796299	protein_coding	C1qbp	exon	ENSMUSG00000018446	ProperStrand	46	chr10	23505152	23505218	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.6154
chr5	124063439	124063456	protein_coding	Clip1	exon	ENSMUSG00000049550	NonProperStrand	3	chr11	97642952	97643045	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-8.5513
chrX	160832511	160833878	protein_coding	Figf	exon	ENSMUSG00000031380	NonProperStrand	3	chr16	23110936	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr10	79416924	79416958	protein_coding	Arid3a	utr3	ENSMUSG00000019564	ProperStrand	16	chr7	57041565	57041581	protein_coding	Prmt3	exon	ENSMUSG00000030505	ProperStrand	89	1	-15.2240
chr5	74489216	74489306	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr11	55296195	55296274	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	13	-12.0299
chr5	123798003	123798025	protein_coding	Bcl7a	intron	ENSMUSG00000029438	ProperStrand	27	chr8	108652911	108652961	protein_coding	Nfatc3	utr3	ENSMUSG00000031902	ProperStrand	75	1	-14.4873
chr12	111879432	111880235	protein_coding	Dync1h1	exon	ENSMUSG00000018707	NonProperStrand	7	chr5	121655126	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-8.0440
chr4	149024711	149024729	protein_coding	Pik3cd	utr3	ENSMUSG00000039936	ProperStrand	151	chr18	73693117	73693137	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-3.7606
chr18	63109676	63109692	protein_coding	Apcdd1	exon	ENSMUSG00000071847	NonProperStrand	254	chr5	108336363	108336409	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-2.2534
chr14	55572157	55572229	protein_coding	Myh6	exon	ENSMUSG00000040752	ProperStrand	7	chr10	127521211	127521270	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	1	-13.2178
chr4	18020485	18020501	protein_coding	Mmp16	exon	ENSMUSG00000028226	ProperStrand	55	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-6.0136
mmu-miR-6240	2	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr9	54757508	54757638	protein_coding	Ireb2	utr3	ENSMUSG00000032293	ProperStrand	45	2	-10.4802
chr5	31117163	31117181	protein_coding	Mapre3	utr5	ENSMUSG00000029166	NonProperStrand	19	chr8	77742558	77742574	protein_coding	Rasd2	exon	ENSMUSG00000034472	NonProperStrand	237	1	-12.8916
chr9	35082725	35082825	protein_coding	Rpusd4	exon	ENSMUSG00000032044	ProperStrand	9	chr4	116826699	116826766	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-10.6489
chr3	33953176	33953193	protein_coding	Fxr1	exon	ENSMUSG00000027680	ProperStrand	58	chr16	23110456	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.5197
chr19	42062597	42062613	protein_coding	Ubtd1	intron	ENSMUSG00000025171	NonProperStrand	9	chr4	131908815	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.5343
chr14	57204539	57204555	protein_coding	Parp4	exon	ENSMUSG00000054509	NonProperStrand	113	chr7	148634750	148634786	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-2.8315
chr5	54389947	54389965	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	chr19	59534008	59534026	protein_coding	Emx2	exon	ENSMUSG00000043969	NonProperStrand	87	1	-10.0354
chr5	103455832	103455922	protein_coding-noncoding	Mapk10	utr3	ENSMUSG00000046709	ProperStrand	1	chr5	103455701	103455791	protein_coding	Mapk10	intron	ENSMUSG00000046709	ProperStrand	18	1	-inf
chr2	66342936	66342952	protein_coding	Scn9a	exon	ENSMUSG00000075316	ProperStrand	58	chr7	116663640	116663736	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	NonProperStrand	51	1	-13.7152
chr8	72858645	72859207	protein_coding	Upf1	exon	ENSMUSG00000058301	ProperStrand	90	chr16	23111745	23111825	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-2.4811
chr7	101143794	101143812	LINE	Lx5	L1	chr7Lx5101143426	NonProperStrand	12	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	9	-inf
chr5	24794965	24795010	protein_coding	Mll3	exon	ENSMUSG00000038056	ProperStrand	31	chr8	32260335	32260440	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-5.9195
chr14	64112672	64112772	protein_coding	Tdh	exon	ENSMUSG00000021953	ProperStrand	67	chr2	145077956	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	3	-16.7897
chr16	32609139	32609230	protein_coding	Tfrc	intron	ENSMUSG00000022797	ProperStrand	71	chr9	63868722	63868739	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	3	-18.1101
chr6	54580530	54585725	protein_coding	Plekha8	exon	ENSMUSG00000005225	ProperStrand	21	chr7	118219574	118219640	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	5	-19.8537
chr8	87186064	87186119	protein_coding	Ier2	exon	ENSMUSG00000053560	ProperStrand	22	chr1	162965979	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-9.0996
chr19	38599575	38599593	protein_coding	Plce1	exon	ENSMUSG00000024998	ProperStrand	20	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.6810
chr14	64111468	64111541	protein_coding	Tdh	utr3	ENSMUSG00000021953	ProperStrand	67	chr5	130300461	130300551	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.3223
chr9	21490460	21490476	protein_coding	Smarca4	exon	ENSMUSG00000032187	ProperStrand	196	chr1	88247816	88247863	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-2.8890
chr7	134671400	134671480	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	chr17	24856620	24856710	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	2	-2.7969
chr10	90581087	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	chr12	92811941	92812014	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	3	-2.8448
chr6	38334134	38334153	protein_coding	Ttc26	intron	ENSMUSG00000056832	ProperStrand	7	chr11	62416598	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-9.5351
chr16	33944208	33944256	protein_coding	Itgb5	exon	ENSMUSG00000022817	ProperStrand	49	chr4	131865855	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.0906
chr3	32607719	32617511	protein_coding	Actl6a	exon	ENSMUSG00000027671	ProperStrand	31	chr16	23110914	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-8.4379
chrX	137880051	137880068	protein_coding	Col4a6	intron	ENSMUSG00000031273	ProperStrand	8	chr11	69483237	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-6.3191
chr4	129407518	129407555	protein_coding	Khdrbs1	exon	ENSMUSG00000028790	ProperStrand	22	chr4	56912201	56912291	protein_coding	D730040F13Rik	exon	ENSMUSG00000055296	ProperStrand	48	1	-15.7741
chr2	152656290	152656306	protein_coding	Bcl2l1	utr5	ENSMUSG00000007659	NonProperStrand	29	chr1	88426722	88426757	protein_coding	Ptma	utr3	ENSMUSG00000026238	ProperStrand	385	1	-11.0585
chr9	109985892	109986030	protein_coding	Mtap4	utr3	ENSMUSG00000032479	ProperStrand	188	chr15	78994730	78994746	protein_coding	Sox10	utr5	ENSMUSG00000033006	NonProperStrand	8	1	-15.1385
chr2	20891584	20891601	antisense	Gm13375	.	ENSMUSG00000075514	NonProperStrand	1	chr16	23110892	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr16	91707474	91709101	protein_coding	Cryzl1	exon	ENSMUSG00000058240	ProperStrand	4	chr1	162965989	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-9.1328
chr15	102042278	102042374	protein_coding	Zfp740	intron	ENSMUSG00000046897	ProperStrand	34	chr18	35716832	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.1571
chr8	23763839	23763856	protein_coding	Polb	utr5	ENSMUSG00000031536	ProperStrand	23	chr9	78327861	78327909	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-8.2545
chr8	13876116	13876175	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	chr5	147646748	147646848	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	1	-2.1278
chr17	80449214	80450049	protein_coding	Hnrpll	exon	ENSMUSG00000024095	ProperStrand	27	chr10	6063959	6063976	protein_coding	Akap12	intron	ENSMUSG00000038587	ProperStrand	1008	1	-9.2823
chr3	156224612	156224628	lincRNA	4930570G19Rik	exon	ENSMUSG00000085084	ProperStrand	326	chr14	51427119	51427162	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	1	-3.9252
chr8	124405780	124405870	protein_coding	Slc7a5	utr3	ENSMUSG00000040010	ProperStrand	166	chr7	117166764	117166844	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	2	-5.0581
chr1	195002540	195002559	protein_coding	Traf3ip3	intron	ENSMUSG00000037318	NonProperStrand	1	chr9	120038589	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-inf
chr2	90235294	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr12	60141352	60141509	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	5	-1.4277
chr8	113681856	113681909	protein_coding	Glg1	exon	ENSMUSG00000003316	ProperStrand	83	chr9	15118325	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-2.8814
chr4	32849281	32849316	protein_coding	Mdn1	exon	ENSMUSG00000058006	ProperStrand	184	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-5.3389
chr1	138329088	138329111	protein_coding	Ddx59	exon	ENSMUSG00000026404	ProperStrand	10	chr15	34370545	34370636	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-7.0767
chr13	54723202	54723218	protein_coding	Faf2	exon	ENSMUSG00000025873	ProperStrand	90	chr4	131908810	131908871	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.7265
chr13	55755831	55755847	protein_coding	Ddx46	intron	ENSMUSG00000021500	ProperStrand	87	chr1	77503661	77503703	protein_coding	Epha4	exon	ENSMUSG00000026235	ProperStrand	57	1	-12.6694
chr6	88429234	88429264	protein_coding	Ruvbl1	exon	ENSMUSG00000030079	ProperStrand	24	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-9.5737
chr2	26493363	26493496	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr4	131866155	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	35	-1.4240
chr8	123090274	123090364	protein_coding	Gse1	exon	ENSMUSG00000031822	ProperStrand	97	chr4	131908274	131908354	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.7982
chr13	38025940	38025981	protein_coding	Rreb1	utr3	ENSMUSG00000039087	ProperStrand	33	chr7	116663635	116663725	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-6.1093
chrX	96238219	96238239	protein_coding	Stard8	intron	ENSMUSG00000031216	NonProperStrand	2	chr11	19921603	19921667	protein_coding	Spred2	utr3	ENSMUSG00000045671	ProperStrand	106	1	-20.1541
chr3	146961347	146961364	LTR	MTE-int	MaLR	chr3MTE-int146961190	ProperStrand	1	chr8	24367265	24367494	protein_coding	Golga7	utr5	ENSMUSG00000015341	ProperStrand	36	1	-inf
chr2	53005191	53009676	protein_coding	Prpf40a	exon	ENSMUSG00000061136	ProperStrand	129	chr11	97641479	97641569	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	1	-6.3383
chr13	49820642	49829318	protein_coding	Iars	exon	ENSMUSG00000037851	ProperStrand	95	chr16	23110868	23110989	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-2.3408
chr6	52696742	52701151	protein_coding	Tax1bp1	exon	ENSMUSG00000004535	ProperStrand	20	chr5	130300534	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.5361
chr8	73121837	73121855	protein_coding	Ssbp4	intron	ENSMUSG00000070003	NonProperStrand	8	chr7	117166725	117166760	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-8.8855
chr18	82773672	82773688	protein_coding	Zfp236	exon	ENSMUSG00000041258	NonProperStrand	117	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	2	-12.1495
chr9	104978029	104978047	protein_coding	Mrpl3	utr3	ENSMUSG00000032563	ProperStrand	13	chr7	134009376	134009396	protein_coding	Taok2	utr3	ENSMUSG00000059981	ProperStrand	47	1	-17.0306
chr15	36529161	36529191	protein_coding	Pabpc1	exon	ENSMUSG00000022283	NonProperStrand	5	chr18	14806341	14806441	snRNA	ENSMUSG00000065369_U1	.	ENSMUSG00000065369	NonProperStrand	3	1	-inf
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr11	69483134	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	34	-19.4219
chr5	121655134	121658469	protein_coding	Rpl6	intron	ENSMUSG00000029614	ProperStrand	332	chr5	108334224	108336492	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	5	-9.0538
chr4	137121571	137121629	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	chr4	149026816	149026832	protein_coding	Pik3cd	exon	ENSMUSG00000039936	ProperStrand	151	1	-6.2736
chr11	82620363	82620413	protein_coding	Rffl	intron	ENSMUSG00000020696	NonProperStrand	6	chr1	182675590	182675653	protein_coding	Acbd3	intron	ENSMUSG00000026499	ProperStrand	67	4	-18.8360
chr6	112689098	112689322	protein_coding	Srgap3	exon	ENSMUSG00000030257	NonProperStrand	208	chr6	125073590	125073629	protein_coding	Chd4	exon	ENSMUSG00000063870	ProperStrand	303	1	-7.5848
chr4	149615227	149619262	protein_coding	Eno1	exon	ENSMUSG00000063524	ProperStrand	432	chr17	24857784	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	4	-1.0694
chr15	58913206	58913296	protein_coding	Mtss1	utr5	ENSMUSG00000022353	ProperStrand	68	chr4	131865855	131865935	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.5775
chr2	135902627	135902645	LTR	RMER15-int	ERVL	chr2RMER15-int135902100	NonProperStrand	6	chr2	26494709	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	4	-18.9321
chr11	24067716	24067733	protein_coding	Bcl11a	utr3	ENSMUSG00000000861	ProperStrand	30	chr7	19863342	19863443	protein_coding	Ppm1n	exon	ENSMUSG00000030402	ProperStrand	6	1	-18.8532
chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	chr9	120038570	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.0402
chr3	153933541	153933557	protein_coding	Slc44a5	utr3	ENSMUSG00000028360	NonProperStrand	33	chr11	6519815	6519930	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-9.1441
chr7	72001137	72001154	protein_coding-noncoding	Fam189a1	utr3	ENSMUSG00000030518	NonProperStrand	11	chrX	132673816	132673833	protein_coding	Bex4	intron	ENSMUSG00000047844	NonProperStrand	70	1	-16.4723
chr8	74119730	74119760	protein_coding	Pgls	intron	ENSMUSG00000031807	ProperStrand	8	chr13	76156115	76156132	protein_coding	Rfesd	utr5	ENSMUSG00000043190	ProperStrand	30	1	-18.5653
chr11	50193376	50193427	protein_coding	Hnrnph1	exon	ENSMUSG00000007850	ProperStrand	49	chr5	74993881	74993976	protein_coding	Fip1l1	utr3	ENSMUSG00000029227	ProperStrand	102	1	-12.6564
chr7	24713726	24713742	protein_coding	Vmn1r179	exon	ENSMUSG00000046924	NonProperStrand	69	chr4	131865854	131865961	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-4.5290
chr4	83118956	83120211	protein_coding	Psip1	exon	ENSMUSG00000028484	ProperStrand	104	chr15	98350178	98350268	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-3.7197
chr11	69128268	69134465	protein_coding	Cntrob	exon	ENSMUSG00000032782	ProperStrand	19	chr16	23111419	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	6	-17.5238
chr11	50014015	50014105	protein_coding	Sqstm1	utr3	ENSMUSG00000015837	ProperStrand	36	chr18	35714196	35714276	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.4028
chr1	33828651	33828669	protein_coding	Zfp451	intron	ENSMUSG00000042197	NonProperStrand	393	chr12	85350481	85350500	protein_coding	Acot1	utr5	ENSMUSG00000072949	ProperStrand	72	1	-9.1830
chr10	74181597	74181665	LTR	RMER16-int	ERVK	chr10RMER16-int74180969	ProperStrand	7	chr16	23111695	23111785	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	7	-inf
chr11	59026044	59026121	protein_coding	Arf1	exon	ENSMUSG00000048076	ProperStrand	52	chr12	112779176	112779266	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-5.0527
chr14	25311003	25315021	protein_coding	Rps24	exon	ENSMUSG00000025290	ProperStrand	110	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-4.4184
chr14	106292732	106292799	protein_coding	Spry2	exon	ENSMUSG00000022114	ProperStrand	22	chr4	99323090	99323157	protein_coding	Foxd3	utr5	ENSMUSG00000067261	ProperStrand	2	1	-inf
chr9	115157662	115159953	protein_coding	Stt3b	exon	ENSMUSG00000032437	ProperStrand	66	chr4	131908418	131908439	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.2842
chr9	109796226	109796306	protein_coding	Cdc25a	utr3	ENSMUSG00000032477	ProperStrand	27	chr11	97641502	97641592	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	1	-9.4643
chr15	75889787	75889978	protein_coding	Scrib	exon	ENSMUSG00000022568	ProperStrand	154	chr15	5068452	5068480	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-4.2441
chr13	12952375	12952465	LTR	IAPEz-int	ERVK	chr13IAPEz-int12952362	ProperStrand	1	chr13	26091259	26091339	LTR	ORR1D2	MaLR	chr13ORR1D226091256	ProperStrand	1	1	-inf
chr3	88715215	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr5	111121066	111121195	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	11	-17.9545
chr16	29394810	29394900	LINE	Lx7	L1	chr16Lx729394825	ProperStrand	1	chr17	79495558	79495648	LINE	Lx9	L1	chr17Lx979495455	ProperStrand	1	1	-inf
chr18	35716788	35716878	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	chr5	92485086	92485220	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	8	-2.1092
chr8	125987305	125987335	protein_coding	Gm20388	intron	ENSMUSG00000092329	ProperStrand	295	chr12	110918165	110918221	snoRNA	ENSMUSG00000065749_AF357428	.	ENSMUSG00000065749	ProperStrand	218	1	-7.5447
chr1	59759661	59759743	protein_coding	Nop58	exon	ENSMUSG00000026020	ProperStrand	104	chr1	162965528	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.3134
chr5	136707644	136707661	protein_coding	Sh2b2	exon	ENSMUSG00000005057	NonProperStrand	101	chr5	142285868	142285884	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	1	-9.5737
chr16	45142112	45142128	protein_coding	Slc35a5	utr3	ENSMUSG00000022664	ProperStrand	4	chr7	29136561	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-12.8965
chr4	155023541	155023577	protein_coding	Cdk11b	exon	ENSMUSG00000029062	ProperStrand	92	chr5	147646778	147646848	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	5	-21.7094
chr11	68239423	68239439	DNA	Charlie8	MER1_type	chr11Charlie868239385	ProperStrand	4	chr19	42199431	42199447	protein_coding	Avpi1	exon	ENSMUSG00000018821	NonProperStrand	9	1	-19.8837
chr2	90235292	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	6058282	6058460	protein_coding	Fau	exon	ENSMUSG00000038274	ProperStrand	64	1	-4.3396
chr16	15584385	15584453	protein_coding	Ube2v2	intron	ENSMUSG00000022674	ProperStrand	10	chr9	63868722	63868739	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	1	-12.2476
chr17	35286997	35287193	protein_coding	Prrc2a	exon	ENSMUSG00000024393	ProperStrand	315	chr6	131330327	131330407	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	ProperStrand	408	1	-6.1794
chr18	67582665	67582694	protein_coding	Afg3l2	exon	ENSMUSG00000024527	ProperStrand	43	chr16	23111372	23111462	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-3.2274
chr10	116488296	116490080	protein_coding	Cct2	utr3	ENSMUSG00000034024	ProperStrand	100	chr11	6428035	6428076	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-4.0908
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr2	129636853	129636889	protein_coding	Stk35	exon	ENSMUSG00000037885	ProperStrand	28	1	-8.4523
chr12	73891665	73893791	protein_coding	Ppm1a	exon	ENSMUSG00000021096	ProperStrand	53	chr19	8963092	8963172	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.4846
chr10	80641693	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	3	-1.9909
chr9	25059948	25059964	protein_coding	Sept7	intron	ENSMUSG00000001833	ProperStrand	101	chr4	46508037	46508117	snoRNA	ENSMUSG00000064410_SNORA36	.	ENSMUSG00000064410	ProperStrand	133	1	-10.6689
chr10	79745868	79750617	protein_coding	Dazap1	exon	ENSMUSG00000069565	ProperStrand	57	chr18	35716765	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-8.3775
chr1	37529442	37529459	protein_coding	Mgat4a	intron	ENSMUSG00000026110	ProperStrand	16	chr1	120734400	120734472	protein_coding	Gli2	exon	ENSMUSG00000048402	ProperStrand	148	1	-14.1869
chr7	121775965	121775984	protein_coding	Calca	exon	ENSMUSG00000030669	NonProperStrand	1	chr16	23110986	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr7	109789611	109789627	protein_coding	Olfr554	exon	ENSMUSG00000073971	NonProperStrand	66	chr2	26494741	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-5.0894
chr17	35985235	35985314	protein_coding	Mdc1	exon	ENSMUSG00000061607	ProperStrand	85	chr3	88497853	88497943	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	3	-15.3323
chr5	100855902	100855973	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr2	119467420	119467442	protein_coding	Nusap1	intron	ENSMUSG00000027306	NonProperStrand	4	1	-12.2924
chr8	48972476	48972493	protein_coding	Wwc2	exon	ENSMUSG00000031563	NonProperStrand	56	chr1	89673669	89673769	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	6	-17.7752
chr15	79913288	79913351	protein_coding	Rpl3	intron	ENSMUSG00000060036	NonProperStrand	7	chr8	73419703	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	NonProperStrand	53	1	-17.9162
chr5	145892250	145892284	protein_coding	Pdap1	exon	ENSMUSG00000029623	ProperStrand	112	chr7	116663661	116663761	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.5131
chr3	36464809	36464825	protein_coding	Ccna2	utr3	ENSMUSG00000027715	ProperStrand	74	chr4	131908236	131908348	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.1297
chr1	194330979	194330995	protein_coding	Kcnh1	utr3	ENSMUSG00000058248	ProperStrand	22	chr4	131908686	131908751	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.8292
chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	chr1	162965981	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-1.4636
chr16	38158104	38158222	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	12	-inf
chr3	137849424	137849440	protein_coding	4930579F01Rik	utr5	ENSMUSG00000012042	NonProperStrand	156	chr9	64022854	64022877	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-6.1316
chr7	133940148	133940248	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	chr16	96349276	96349337	protein_coding	Hmgn1	utr5	ENSMUSG00000040681	ProperStrand	38	1	-9.2585
chr6	112689098	112689322	protein_coding	Srgap3	exon	ENSMUSG00000030257	NonProperStrand	208	chr17	39985309	39985356	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-3.5558
chr2	91786150	91786240	protein_coding	Dgkz	intron	ENSMUSG00000040479	ProperStrand	46	chr2	92118390	92118470	protein_coding	Phf21a	intron	ENSMUSG00000058318	NonProperStrand	14	1	-16.9139
chr2	118587459	118587476	protein_coding	A430105I19Rik	exon	ENSMUSG00000045838	NonProperStrand	2	chr7	29136525	29136600	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-9.5181
chr9	55889850	55889881	protein_coding	Rcn2	utr5	ENSMUSG00000032320	ProperStrand	11	chr7	116664843	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-9.5428
chr6	131330311	131330401	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	NonProperStrand	4	chr7	116664871	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	NonProperStrand	12	1	-21.0614
chr7	38468013	38468033	protein_coding	Zfp536	intron	ENSMUSG00000043456	ProperStrand	57	chr2	138188029	138188045	protein_coding	Btbd3	intron	ENSMUSG00000062098	NonProperStrand	121	1	-12.0082
chr3	152450608	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	chr9	41800431	41800481	protein_coding	Sorl1	exon	ENSMUSG00000049313	ProperStrand	112	1	-7.5584
chr2	27303681	27303718	protein_coding	Brd3	utr3	ENSMUSG00000026918	ProperStrand	85	chr2	118587121	118587385	protein_coding	A430105I19Rik	exon	ENSMUSG00000045838	ProperStrand	37	1	-13.5890
chr11	115128414	115128431	protein_coding	Grin2c	utr5	ENSMUSG00000020734	ProperStrand	12	chr16	23110466	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.4970
chr17	46663594	46663610	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr8	129461060	129463783	protein_coding	Tomm20	exon	ENSMUSG00000058779	ProperStrand	55	1	-9.4054
chr8	116974523	116974553	protein_coding-noncoding	Wwox	utr5	ENSMUSG00000004637	ProperStrand	3	chr12	110874225	110874294	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	3	-inf
chr12	3253339	3256869	protein_coding	Rab10	exon	ENSMUSG00000020671	ProperStrand	11	chr4	131908689	131908797	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-14.0384
chr17	23956962	23957036	protein_coding	Srrm2	utr3	ENSMUSG00000039218	ProperStrand	521	chr2	158182156	158182256	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	3	-3.7966
chr15	77597977	77597993	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr7	117189864	117189922	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-2.0509
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr5	108630393	108630409	protein_coding	Ccdc18	exon	ENSMUSG00000056531	ProperStrand	27	1	-10.2038
chr5	74489201	74489330	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr9	15069885	15069901	protein_coding	Med17	exon	ENSMUSG00000031935	ProperStrand	135	1	-4.0633
chr17	26173577	26173594	protein_coding	Rab11fip3	exon	ENSMUSG00000037098	ProperStrand	32	chr15	79913288	79913308	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.7856
chr11	96916850	96916870	protein_coding	Osbpl7	exon	ENSMUSG00000038534	ProperStrand	15	chr16	17210492	17210512	protein_coding	Rimbp3	exon	ENSMUSG00000071636	ProperStrand	67	1	-15.9020
chr15	76734863	76735004	protein_coding	Rpl8	exon	ENSMUSG00000003970	ProperStrand	191	chr2	83693562	83693578	protein_coding	Fam171b	exon	ENSMUSG00000048388	NonProperStrand	175	1	-8.8461
chr15	66937182	66937198	protein_coding	St3gal1	utr3	ENSMUSG00000013846	NonProperStrand	4	chr18	64616832	64616849	protein_coding	Fech	utr3	ENSMUSG00000024588	ProperStrand	14	1	-inf
chr17	4082115	4082151	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr14	119693352	119693368	protein_coding	Hs6st3	intron	ENSMUSG00000053465	NonProperStrand	134	1	-8.3569
chr9	98994953	98995038	protein_coding	Pik3cb	exon	ENSMUSG00000032462	ProperStrand	48	chr8	73419656	73419682	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.5376
chr7	28146782	28146798	protein_coding	Spnb4	exon	ENSMUSG00000011751	NonProperStrand	84	chr4	116828379	116828451	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-7.7103
chr11	108319612	108319702	protein_coding	Ccdc46	intron	ENSMUSG00000020728	NonProperStrand	10	chr11	108135539	108135629	protein_coding	Prkca	intron	ENSMUSG00000050965	NonProperStrand	10	1	-20.3924
chr1	72907208	72907226	protein_coding	Igfbp5	utr3	ENSMUSG00000026185	NonProperStrand	3	chr10	5991630	5991683	protein_coding	Akap12	exon	ENSMUSG00000038587	ProperStrand	1008	1	-14.0385
chr11	117729369	117729386	protein_coding	Tha1	utr3	ENSMUSG00000017713	NonProperStrand	56	chr8	59992816	59992877	protein_coding	Hmgb2	exon	ENSMUSG00000054717	ProperStrand	184	2	-17.6126
chr8	90663824	90663842	protein_coding	Heatr3	exon	ENSMUSG00000031657	ProperStrand	24	chrX	71517823	71517961	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	4	-inf
chr9	65756911	65756928	protein_coding	Csnk1g1	utr5	ENSMUSG00000032384	ProperStrand	31	chr2	69791758	69791805	protein_coding	Ubr3	exon	ENSMUSG00000044308	ProperStrand	62	1	-14.5871
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr5	122580412	122584741	protein_coding	Ccdc63	utr5	ENSMUSG00000043036	ProperStrand	120	1	-11.7607
chr4	141254665	141254725	protein_coding	Ddi2	exon	ENSMUSG00000078515	ProperStrand	79	chr5	130295414	130295451	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-4.7165
chr5	87973763	87973853	LINE	L1Md_T	L1	chr5L1Md_T87968783	ProperStrand	1	chr9	109292303	109292383	protein_coding	Fbxw22	intron	ENSMUSG00000070324	NonProperStrand	1	1	-inf
chr17	36143398	36143478	antisense	A930015D03Rik	.	ENSMUSG00000092368	ProperStrand	2	chr12	111704844	111704933	protein_coding	Ppp2r5c	intron	ENSMUSG00000017843	NonProperStrand	16	1	-inf
chr11	98190871	98190888	protein_coding	Neurod2	utr5	ENSMUSG00000038255	ProperStrand	15	chr1	162965980	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-6.3018
chr6	14426556	14426574	LINE	L1_Mus1	L1	chr6L1_Mus114426559	NonProperStrand	6	chr4	132055730	132055779	protein_coding	Sesn2	exon	ENSMUSG00000028893	ProperStrand	75	1	-17.5189
chr2	26494708	26494808	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	chr9	15130723	15130746	snoRNA	ENSMUSG00000077506_Scarna9	.	ENSMUSG00000077506	ProperStrand	148	1	-1.6038
chr4	135516770	135516786	protein_coding	Hmgcl	exon	ENSMUSG00000028672	ProperStrand	8	chr4	122970392	122970483	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-11.5405
chr19	5796557	5796592	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr10	30320342	30320358	protein_coding	Trmt11	intron	ENSMUSG00000019792	NonProperStrand	26	1	-9.2270
chr14	56207317	56208205	protein_coding	Psme2	exon	ENSMUSG00000079197	ProperStrand	7	chr10	23505152	23505218	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-5.0629
chrX	98632649	98634838	protein_coding	Nono	exon	ENSMUSG00000031311	ProperStrand	102	chr11	68886949	68887039	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-3.1630
chr10	48338779	48338797	LINE	Lx5	L1	chr10Lx548337987	ProperStrand	6	chr11	68886928	68886993	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-8.8009
chr4	151034217	151034238	protein_coding	Camta1	intron	ENSMUSG00000014592	ProperStrand	170	chr18	33954817	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-1.7269
chr2	144091838	144091938	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	ProperStrand	549	chr12	92811868	92811922	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	1	-4.2350
chr9	72583024	72584563	protein_coding	Nedd4	exon	ENSMUSG00000032216	ProperStrand	308	chr7	30074411	30074430	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	2	-11.4993
chr6	7625293	7625358	protein_coding	Asns	utr3	ENSMUSG00000029752	ProperStrand	59	chr18	35102297	35102340	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-6.6233
chr5	77343959	77344009	protein_coding	Ppat	utr3	ENSMUSG00000029246	ProperStrand	55	chr16	23110454	23110517	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-6.8549
chr8	129114239	129114266	protein_coding	Irf2bp2	utr3	ENSMUSG00000051495	ProperStrand	25	chr17	24857717	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.8692
chr4	53034223	53034323	protein_coding	Nipsnap3b	utr3	ENSMUSG00000015247	ProperStrand	3	chr1	162967525	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-9.6828
chr17	73931953	73931971	protein_coding	Galnt14	intron	ENSMUSG00000024064	ProperStrand	8	chr3	88715213	88715230	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-11.3577
chr2	127416793	127416883	protein_coding	Mrps5	intron	ENSMUSG00000027374	ProperStrand	84	chr17	35089182	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-4.8324
chr6	89266411	89266490	protein_coding	Plxna1	utr3	ENSMUSG00000030084	ProperStrand	233	chr3	16083589	16083606	protein_coding	Ythdf3	intron	ENSMUSG00000047213	NonProperStrand	18	1	-13.0374
chr6	49092742	49092832	protein_coding	Igf2bp3	intron	ENSMUSG00000029814	ProperStrand	23	chr9	120039533	120039613	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-5.1432
chr13	51798359	51798382	protein_coding	Sema4d	exon	ENSMUSG00000021451	ProperStrand	42	chr2	31924012	31924028	protein_coding	Fam78a	utr3	ENSMUSG00000050592	NonProperStrand	340	1	-10.5565
chr2	90235312	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	67678416	67678433	protein_coding	Tmem33	utr3	ENSMUSG00000037720	ProperStrand	6	1	-9.1372
chr3	136866457	136866479	LTR	MTEa-int	MaLR	chr3MTEa-int136866455	ProperStrand	1	chr2	51967905	51967989	protein_coding	Rif1	exon	ENSMUSG00000036202	ProperStrand	201	1	-inf
chr18	50663520	50663610	Simple_repeat	(GGA)n	Simple_repeat	chr18(GGA)n50663483	NonProperStrand	1	chr13	12173025	12173115	protein_coding	Ryr2	intron	ENSMUSG00000021313	NonProperStrand	15	1	-inf
chr9	86539919	86539976	protein_coding	Me1	exon	ENSMUSG00000032418	ProperStrand	12	chr5	77738902	77738918	protein_coding	Noa1	exon	ENSMUSG00000036285	ProperStrand	147	1	-14.8008
chr3	153057501	153057524	protein_coding	St6galnac3	intron	ENSMUSG00000052544	NonProperStrand	11	chr15	76478647	76478715	protein_coding	Cyhr1	exon	ENSMUSG00000053929	ProperStrand	16	1	-19.2002
chr10	62301156	62301213	protein_coding	Tet1	exon	ENSMUSG00000047146	ProperStrand	286	chr8	125731536	125731552	protein_coding	Gm20388	intron	ENSMUSG00000092329	ProperStrand	295	1	-7.0074
chr15	79260505	79269208	protein_coding	Csnk1e	exon	ENSMUSG00000022433	ProperStrand	59	chr6	52965701	52965718	protein_coding	Jazf1	intron	ENSMUSG00000063568	ProperStrand	43	1	-14.0228
chr4	82114659	82114675	protein_coding	Nfib	intron	ENSMUSG00000008575	ProperStrand	50	chr13	40982775	40982792	protein_coding	Gcnt2	exon	ENSMUSG00000021360	ProperStrand	31	1	-15.0042
chr16	49758915	49758985	protein_coding	Ift57	intron	ENSMUSG00000032965	ProperStrand	2	chr5	108334193	108334283	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-12.2128
chr16	57391758	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr9	15121015	15121107	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	1	-4.2764
chr2	54612318	54612336	protein_coding	Galnt13	intron	ENSMUSG00000060988	NonProperStrand	9	chr7	16524110	16524135	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	1	-13.6070
chr1	89578142	89580321	protein_coding	Inpp5d	exon	ENSMUSG00000026288	ProperStrand	75	chr1	162965532	162965554	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-4.9930
chr3	97817679	97851651	protein_coding	Notch2	exon	ENSMUSG00000027878	ProperStrand	86	chr1	33828651	33828669	protein_coding	Zfp451	intron	ENSMUSG00000042197	NonProperStrand	393	1	-8.8272
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chrX	113862541	113862569	snoRNA	ENSMUSG00000088518_SNORA9	.	ENSMUSG00000088518	ProperStrand	280	1	-5.8510
chr19	8799852	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	chr4	41160861	41160879	snoRNA	ENSMUSG00000093562_AL807823.1	.	ENSMUSG00000093562	ProperStrand	1	1	-inf
chr7	152118581	152118597	protein_coding	Ccnd1	exon	ENSMUSG00000070348	ProperStrand	93	chr7	29136524	29136577	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.6610
chr7	117147181	117147211	snRNA	ENSMUSG00000065389_U1	.	ENSMUSG00000065389	ProperStrand	12	chr11	116938692	116938749	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	3	-inf
chr14	31953025	31953118	protein_coding	Stab1	exon	ENSMUSG00000042286	NonProperStrand	127	chr18	73693108	73693137	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-4.0837
chr1	74497112	74533325	protein_coding	Usp37	exon	ENSMUSG00000033364	ProperStrand	47	chr10	23505152	23505279	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-2.9598
chr1	135518268	135554321	protein_coding	Zc3h11a	exon	ENSMUSG00000026464	ProperStrand	102	chr16	23110829	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	7	-2.8274
chr8	90665635	90668445	protein_coding	Heatr3	exon	ENSMUSG00000031657	ProperStrand	24	chr7	128821886	128822908	protein_coding	Usp31	exon	ENSMUSG00000063317	NonProperStrand	5	1	-19.0819
chr18	35714268	35714292	lincRNA	Snhg4	intron	ENSMUSG00000090430	ProperStrand	270	chr9	120039533	120039622	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	4	-4.4328
chr2	90235294	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	79606892	79606908	protein_coding	Atp5d	intron	ENSMUSG00000003072	ProperStrand	44	1	-5.0608
chr4	21606097	21606114	protein_coding	Prdm13	exon	ENSMUSG00000040478	ProperStrand	51	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-3.8950
chr14	87659491	87659512	LTR	MTEa	MaLR	chr14MTEa87659331	NonProperStrand	83	chr2	34561657	34562334	protein_coding	Gapvd1	exon	ENSMUSG00000026867	ProperStrand	31	1	-13.9911
chr6	71844862	71847107	protein_coding	Ptcd3	exon	ENSMUSG00000063884	ProperStrand	34	chr16	23110962	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.8923
chr5	108333572	108333605	snoRNA	ENSMUSG00000064453_Snord21	.	ENSMUSG00000064453	ProperStrand	201	chr2	26493395	26493485	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-1.6679
chr2	90235298	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	53382555	53382572	SINE	ID_B1	B4	chr9ID_B153382464	ProperStrand	11	1	-7.8469
chr12	99998061	99998591	protein_coding	Zc3h14	exon	ENSMUSG00000021012	ProperStrand	27	chr10	23506278	23506348	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-8.5490
chr1	24621087	24621177	protein_coding	Gm10925	utr3	ENSMUSG00000090378	ProperStrand	320	chr11	77996560	77996619	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	5	-12.9082
chr4	118142674	118142764	LINE	L1_Mur2	L1	chr4L1_Mur2118142564	ProperStrand	1	chr7	54442953	54443033	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-inf
chrX	149934731	149934821	protein_coding	Ubqln2	exon	ENSMUSG00000050148	ProperStrand	12	chr4	131908810	131908890	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.9639
chr2	118995835	118995856	protein_coding	Gchfr	intron	ENSMUSG00000046814	NonProperStrand	1	chr12	77066968	77066984	protein_coding	Syne2	exon	ENSMUSG00000063450	ProperStrand	63	1	-inf
chr4	43505744	43505824	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr1	187198037	187202689	protein_coding	Eprs	exon	ENSMUSG00000026615	ProperStrand	149	1	-1.5633
chr5	122691914	122691930	protein_coding	Hvcn1	utr3	ENSMUSG00000064267	ProperStrand	182	chr6	125136677	125136701	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	1	-4.2889
chrX	103395562	103395611	protein_coding	Pgk1	exon	ENSMUSG00000062070	ProperStrand	484	chr11	68886928	68887038	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-0.7856
chr14	31951855	31952023	protein_coding	Nt5dc2	exon	ENSMUSG00000071547	ProperStrand	22	chr12	88778632	88778667	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	2	-13.5839
chr17	27259645	27259706	protein_coding	2900010M23Rik	utr3	ENSMUSG00000024208	ProperStrand	13	chr16	23111431	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-6.6036
chr13	20564016	20564034	protein_coding	Elmo1	intron	ENSMUSG00000041112	NonProperStrand	34	chr11	97642952	97643038	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-8.7378
chr14	87659491	87659512	LTR	MTEa	MaLR	chr14MTEa87659331	NonProperStrand	83	chr14	76936704	76936729	protein_coding	Serp2	intron	ENSMUSG00000052584	NonProperStrand	41	1	-13.4296
chr11	101466255	101466345	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	chr14	76247739	76247805	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	4	-3.4628
chr12	55446712	55446732	DNA	RMER30	MER1_type	chr12RMER3055446698	NonProperStrand	1	chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	1	-inf
chr9	65044377	65044467	snRNA	ENSMUSG00000075763_U5	.	ENSMUSG00000075763	ProperStrand	216	chrX	71517857	71517937	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-4.0658
chr10	96067564	96067581	LTR	RMER19B	ERVK	chr10RMER19B96067159	ProperStrand	12	chr5	120935049	120935106	protein_coding	Plbd2	utr3	ENSMUSG00000029598	ProperStrand	22	1	-19.0611
chr7	117166724	117166859	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	chr1	63225577	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	9	-5.2539
chr19	53698063	53699439	protein_coding	Smc3	exon	ENSMUSG00000024974	ProperStrand	61	chr8	129468747	129468800	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-4.3822
chr9	78023109	78023170	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr15	8089774	8089792	protein_coding	Nup155	intron	ENSMUSG00000022142	NonProperStrand	8	1	-9.9796
chr2	77408706	77408723	protein_coding	Zfp385b	intron	ENSMUSG00000027016	NonProperStrand	17	chr8	73419683	73419738	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-5.5405
chr1	181677322	181677359	protein_coding	Ahctf1	exon	ENSMUSG00000026491	ProperStrand	39	chr19	8799844	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-5.7886
chr2	22444472	22444510	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	chr6	115757990	115758090	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-0.7989
chr14	54983051	54983112	protein_coding	Oxa1l	exon	ENSMUSG00000000959	ProperStrand	31	chr16	23111760	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.0285
chr3	116446508	116446526	protein_coding	Agl	utr3	ENSMUSG00000033400	NonProperStrand	6	chr8	32260343	32260426	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	2	-15.0051
chr2	164732935	164732951	protein_coding	Zfp335	exon	ENSMUSG00000039834	ProperStrand	42	chr3	68889088	68889146	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-3.9169
chr3	87973822	87973892	protein_coding	Mef2d	utr3	ENSMUSG00000001419	ProperStrand	15	chr1	162967495	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-6.1639
chr6	4593178	4593207	protein_coding	Casd1	utr3	ENSMUSG00000015189	ProperStrand	2	chr16	23110838	23110961	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr16	37384897	37384913	protein_coding	Stxbp5l	utr5	ENSMUSG00000022829	ProperStrand	332	chr15	79908841	79909140	protein_coding	Rpl3	exon	ENSMUSG00000060036	ProperStrand	8342	1	-0.8773
chr2	119635249	119635658	protein_coding	Tyro3	exon	ENSMUSG00000027298	ProperStrand	35	chr2	26768049	26768111	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	1	-9.4778
chr1	71694614	71694680	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr1	64777948	64777988	protein_coding	Fzd5	utr3	ENSMUSG00000045005	ProperStrand	175	1	-5.7176
chr13	9833551	9833677	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr9	15118244	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	23	-2.0641
chr8	83312488	83312504	protein_coding	Gab1	exon	ENSMUSG00000031714	ProperStrand	72	chr5	121655015	121655097	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.4110
chr6	129533250	129534178	protein_coding	Klre1	exon	ENSMUSG00000050241	NonProperStrand	20	chr19	8799845	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-7.1233
chr8	124909961	124909978	protein_coding	Zc3h18	intron	ENSMUSG00000017478	NonProperStrand	9	chr8	73038052	73039305	protein_coding	2810422J05Rik	exon	ENSMUSG00000055553	ProperStrand	171	1	-15.0854
chr6	136530936	136535594	protein_coding	Atf7ip	exon	ENSMUSG00000030213	ProperStrand	22	chr2	91436245	91436335	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-9.5194
chr1	39148095	39148115	LTR	MT2A	ERVL	chr1MT2A39147922	NonProperStrand	2	chr7	118219664	118219690	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-11.5289
chr15	102290984	102291074	protein_coding	Prr13	exon	ENSMUSG00000023048	ProperStrand	13	chr16	23110914	23110994	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.3283
chr6	148895104	148895122	lincRNA	3010003L21Rik	intron	ENSMUSG00000085355	ProperStrand	1	chr11	101645784	101645807	protein_coding-noncoding	Etv4	utr3	ENSMUSG00000017724	NonProperStrand	9	1	-inf
chr11	98862364	98862391	protein_coding	Top2a	exon	ENSMUSG00000020914	ProperStrand	324	chr11	69482621	69482677	protein_coding	Eif4a1	exon	ENSMUSG00000059796	ProperStrand	108	1	-8.7564
chr11	113523870	113523887	protein_coding	Cog1	utr3	ENSMUSG00000018661	ProperStrand	51	chr8	97296133	97296149	protein_coding	Cx3cl1	utr5	ENSMUSG00000031778	NonProperStrand	6	1	-18.4396
chr15	96063288	96063304	lincRNA	4833422M21Rik	exon	ENSMUSG00000085460	NonProperStrand	37	chr11	77995189	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-7.1433
chr9	54894710	54894731	protein_coding	Chrnb4	intron	ENSMUSG00000035200	ProperStrand	2	chr7	116664848	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-9.7350
chr5	136261825	136262123	protein_coding	Mdh2	exon	ENSMUSG00000019179	ProperStrand	50	chr15	25722922	25722952	protein_coding	Myo10	exon	ENSMUSG00000022272	ProperStrand	168	2	-18.1213
chr5	124909892	124909938	protein_coding	Setd8	exon	ENSMUSG00000049327	ProperStrand	71	chr7	116663631	116663721	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.2277
chr11	116535269	116535335	protein_coding	1810032O08Rik	exon	ENSMUSG00000020812	ProperStrand	2471	chr2	31924012	31924028	protein_coding	Fam78a	utr3	ENSMUSG00000050592	NonProperStrand	340	1	-2.6593
chr2	90235303	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	ProperStrand	24	chr17	24857734	24857848	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	NonProperStrand	27	1	-16.7430
chr9	64023240	64023330	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	chr2	26494706	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	6	-2.3773
chr8	109185888	109187693	protein_coding	Cdh1	exon	ENSMUSG00000000303	ProperStrand	283	chr10	20080843	20080859	protein_coding	Fam54a	utr3	ENSMUSG00000019992	ProperStrand	232	1	-7.5036
chr9	63169235	63169270	protein_coding	Map2k5	intron	ENSMUSG00000058444	ProperStrand	193	chr11	69483136	69483279	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	5	-5.2300
chr11	14047507	14047524	lincRNA	4930554G24Rik	exon	ENSMUSG00000085452	ProperStrand	23	chr2	130103751	130103797	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-10.4081
chr4	101028501	101028586	lincRNA	E130102H24Rik	intron	ENSMUSG00000086782	ProperStrand	5	chr16	23111372	23111446	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-5.8178
chr7	116663634	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	chr9	15120970	15121019	snoRNA	ENSMUSG00000065265_SNORA32	.	ENSMUSG00000065265	ProperStrand	101	3	-4.7647
chr11	115254072	115254088	protein_coding	Cdr2l	exon	ENSMUSG00000050910	ProperStrand	9	chr2	26494708	26494791	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-11.1522
chr9	77830652	77830699	protein_coding	Elovl5	utr3	ENSMUSG00000032349	ProperStrand	32	chr3	153575089	153575115	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	1	-9.7610
chr9	65756911	65756928	protein_coding	Csnk1g1	utr5	ENSMUSG00000032384	ProperStrand	31	chr4	116828379	116828453	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-9.7120
chr5	140919043	140919143	protein_coding	Eif3b	utr3	ENSMUSG00000056076	ProperStrand	66	chrX	34622906	34622922	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-3.0000
chr5	103854542	103854558	protein_coding	Ptpn13	utr5	ENSMUSG00000034573	NonProperStrand	74	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-5.4319
chr10	79457167	79457207	protein_coding	Cnn2	exon	ENSMUSG00000004665	ProperStrand	12	chr18	35716729	35716761	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-5.1577
chr17	28197822	28197861	protein_coding	Anks1	utr3	ENSMUSG00000024219	ProperStrand	32	chr17	24562662	24562695	protein_coding	Rnps1	utr3	ENSMUSG00000034681	ProperStrand	40	2	-22.3503
chr1	130828531	130828621	LTR	BGLII	ERVK	chr1BGLII130828517	ProperStrand	1	chr8	106298303	106298393	LTR	BGLII	ERVK	chr8BGLII106298140	ProperStrand	1	1	-inf
chr12	60141324	60141414	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	chr5	115939528	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-1.8000
chr4	131865381	131865472	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	chr2	130103751	130103797	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	3	-1.5906
chr15	98868446	98868487	protein_coding	Tuba1c	utr3	ENSMUSG00000043091	ProperStrand	28	chr11	69483191	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-6.4863
chr5	25198348	25198371	protein_coding	Xrcc2	exon	ENSMUSG00000028933	ProperStrand	8	chrX	7182489	7182506	protein_coding	Ccdc22	utr5	ENSMUSG00000031143	NonProperStrand	51	2	-inf
chr11	68603801	68603820	protein_coding	Myh10	intron	ENSMUSG00000020900	ProperStrand	91	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-7.7610
chr19	44380139	44380182	protein_coding	Scd2	utr3	ENSMUSG00000025203	ProperStrand	219	chr7	134341340	134341357	protein_coding	Tbc1d10b	utr3	ENSMUSG00000042492	ProperStrand	187	1	-8.4414
chr12	102240804	102240855	protein_coding	Ccdc88c	intron	ENSMUSG00000021182	ProperStrand	151	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-6.3274
chr9	78215863	78215911	protein_coding	Dppa5a	utr5	ENSMUSG00000060461	ProperStrand	79	chr19	8963027	8963084	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.8294
chr2	75950586	75950666	protein_coding	Pde11a	intron	ENSMUSG00000075270	NonProperStrand	8	chr2	75937834	75937924	protein_coding	Pde11a	intron	ENSMUSG00000075270	ProperStrand	11	1	-18.8752
chr9	63066908	63066926	protein_coding	Map2k5	intron	ENSMUSG00000058444	NonProperStrand	79	chr19	8798484	8798516	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-4.6801
chr17	24539275	24539317	protein_coding	Abca3	exon	ENSMUSG00000024130	ProperStrand	20	chr19	8798484	8798516	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-7.3950
chr16	57391559	57391679	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr16	23110475	23110579	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	NonProperStrand	16	2	-20.4283
chr6	72907422	72907512	protein_coding	Tmsb10	utr3	ENSMUSG00000079523	ProperStrand	24	chr1	89673590	89673670	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-5.0005
chr2	53003875	53003891	protein_coding	Prpf40a	exon	ENSMUSG00000061136	ProperStrand	129	chr15	79908960	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-4.0048
chrX	152009278	152009294	protein_coding	Ptchd1	exon	ENSMUSG00000041552	NonProperStrand	294	chr5	108336375	108336411	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-2.0151
chr8	98270015	98270095	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	chr1	145626083	145626173	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-1.5390
chr9	21373906	21374006	protein_coding	Carm1	exon	ENSMUSG00000032185	ProperStrand	82	chr16	23111770	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	8	-14.6270
chr4	79650811	79650855	pseudogene	Gm11410	.	ENSMUSG00000083219	ProperStrand	47	chr19	8963076	8963166	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.6924
chr16	84977574	84977590	protein_coding	App	intron	ENSMUSG00000022892	NonProperStrand	101	chr16	23110454	23110495	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.6229
chr10	127521080	127523423	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr4	116827117	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	5	-11.9537
chr5	33591271	33591792	protein_coding	Ctbp1	exon	ENSMUSG00000037373	ProperStrand	17	chr14	52829460	52829507	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	5	-inf
chr14	72301755	72301771	SINE	B4	B4	chr14B472301692	NonProperStrand	99	chr6	108208742	108208765	protein_coding	Itpr1	intron	ENSMUSG00000030102	ProperStrand	94	1	-11.4045
chr3	34550344	34550366	protein_coding	Sox2	utr3	ENSMUSG00000074637	ProperStrand	299	chr3	108357322	108357412	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-1.7096
chr10	43761459	43761482	LINE	Lx3C	L1	chr10Lx3C43761021	ProperStrand	1	chr16	20392726	20392849	protein_coding	Abcc5	exon	ENSMUSG00000022822	ProperStrand	30	1	-inf
chr17	23804541	23804557	protein_coding	Ccdc64b	exon	ENSMUSG00000043782	ProperStrand	9	chr1	162965550	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-7.0004
chr18	24777645	24777938	protein_coding	Elp2	exon	ENSMUSG00000024271	ProperStrand	46	chr7	51505224	51505304	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	1	-8.6843
chr2	90235302	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr3	14565743	14565762	protein_coding	Lrrcc1	exon	ENSMUSG00000027550	ProperStrand	39	1	-5.2962
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr10	90324049	90324065	protein_coding	Anks1b	intron	ENSMUSG00000058589	NonProperStrand	230	1	-3.3457
chr11	100338532	100338632	protein_coding	Acly	utr3	ENSMUSG00000020917	ProperStrand	183	chr18	33954920	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-1.6154
chr17	28728208	28729167	protein_coding	Srpk1	exon	ENSMUSG00000004865	ProperStrand	61	chr18	33954906	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-5.9219
chr19	45077366	45077456	protein_coding	Sema4g	utr3	ENSMUSG00000025207	ProperStrand	58	chr5	74489576	74489656	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-3.8413
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr17	35089181	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	3	-1.5804
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr5	19721265	19721281	protein_coding	Magi2	exon	ENSMUSG00000040003	ProperStrand	49	1	-8.2005
chr5	138715782	138716747	protein_coding	Gpc2	exon	ENSMUSG00000029510	ProperStrand	1	chr16	23110913	23111003	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr16	44215855	44215955	protein_coding	Gm608	exon	ENSMUSG00000068284	ProperStrand	17	chr15	34370545	34370573	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-5.9911
chr10	66940700	66940780	SINE	B4	B4	chr10B466940641	ProperStrand	1	chr10	66940946	66941036	SINE	RSINE1	B4	chr10RSINE166940956	NonProperStrand	1	1	-inf
chr2	92241230	92241287	protein_coding	Mapk8ip1	utr5	ENSMUSG00000027223	ProperStrand	501	chr4	124736326	124736344	protein_coding	Dnali1	exon	ENSMUSG00000042707	ProperStrand	45	1	-9.6433
chr4	108278918	108278934	protein_coding	Orc1	exon	ENSMUSG00000028587	ProperStrand	161	chr4	56910496	56910629	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-4.1985
chr1	74200574	74200591	protein_coding	Cxcr2	utr5	ENSMUSG00000026180	NonProperStrand	3	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-11.5113
chr19	41969656	41969698	protein_coding	Rrp12	exon	ENSMUSG00000035049	ProperStrand	106	chr4	131908357	131908440	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-2.4549
chr10	114642325	114642362	protein_coding	Tbc1d15	intron	ENSMUSG00000020130	ProperStrand	12	chr15	79913295	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	3	-15.6414
chr15	100311922	100311938	protein_coding	Csrnp2	utr3	ENSMUSG00000044636	NonProperStrand	60	chr19	8798740	8798770	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-4.8011
chr17	12585979	12585995	protein_coding	Plg	exon	ENSMUSG00000059481	ProperStrand	86	chr11	96113088	96122959	protein_coding	Gm53	exon	ENSMUSG00000078706	ProperStrand	1	1	-inf
chr15	77597723	77597755	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr11	77996576	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-1.9551
chr16	53448644	53448734	LINE	L1Md_F2	L1	chr16L1Md_F253447286	ProperStrand	1	chr12	4630798	4630888	protein_coding	Itsn2	intron	ENSMUSG00000020640	ProperStrand	33	1	-inf
chr18	24363855	24363872	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr12	17552996	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	2	-5.5870
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	3	-4.5715
chr6	120292389	120292452	protein_coding	Ccdc77	intron	ENSMUSG00000030177	ProperStrand	17	chr4	122970393	122970483	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-9.9640
chr12	117559654	117559675	protein_coding	Esyt2	exon	ENSMUSG00000021171	NonProperStrand	6	chr18	35714196	35714286	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-8.0481
chrX	148436905	148437912	protein_coding	Hsd17b10	exon	ENSMUSG00000025260	ProperStrand	10	chr6	71832582	71832622	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	3	-22.4263
chr14	31335958	31335983	protein_coding	Dcp1a	exon	ENSMUSG00000021962	ProperStrand	20	chr16	23110903	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-11.5637
chr14	11125608	11125625	protein_coding	Fhit	intron	ENSMUSG00000060579	NonProperStrand	51	chr19	8798484	8798523	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-5.5288
chr11	69557555	69557617	protein_coding	Polr2a	exon	ENSMUSG00000005198	ProperStrand	200	chr4	116883470	116883564	snRNA	ENSMUSG00000070237_U5	.	ENSMUSG00000070237	ProperStrand	154	3	-19.9920
chr12	103372013	103372037	protein_coding	Slc24a4	intron	ENSMUSG00000041771	NonProperStrand	5	chr7	116664794	116664884	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-7.4478
chr12	31580259	31580285	protein_coding	Acp1	utr3	ENSMUSG00000044573	ProperStrand	12	chr3	123210869	123210969	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	5	-20.9540
chr2	90235296	90235330	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	35142458	35142512	protein_coding	Vars	exon	ENSMUSG00000007029	ProperStrand	121	1	-3.1584
chr15	102169291	102169312	protein_coding	Aaas	exon	ENSMUSG00000036678	ProperStrand	10	chr3	68889026	68889126	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-6.7595
chr2	32143156	32143451	protein_coding	Swi5	utr5	ENSMUSG00000044627	ProperStrand	16	chr7	148634778	148634836	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-6.5767
chr4	131865883	131865986	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	NonProperStrand	39	chr19	8963129	8963178	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-11.0240
chr8	98268121	98268200	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	chr18	33954917	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-0.8835
chr11	49966197	49966213	protein_coding	Tbc1d9b	exon	ENSMUSG00000036644	ProperStrand	27	chr4	155366536	155366553	protein_coding	B3galt6	exon	ENSMUSG00000050796	ProperStrand	40	1	-15.7757
chrX	166426849	166426894	protein_coding	Mid1	exon	ENSMUSG00000035299	ProperStrand	209	chr9	15130707	15130765	snoRNA	ENSMUSG00000077506_Scarna9	.	ENSMUSG00000077506	ProperStrand	148	1	-9.0008
chr2	61649789	61649807	protein_coding	Tbr1	exon	ENSMUSG00000035033	ProperStrand	9	chr2	130101241	130101310	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-10.4559
chr11	14961829	14961849	LINE	Lx	L1	chr11Lx14961726	ProperStrand	93	chr9	120039533	120039553	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.5423
chr11	100339712	100340585	protein_coding	Acly	exon	ENSMUSG00000020917	ProperStrand	183	chr6	48410411	48410428	protein_coding	Sspo	exon	ENSMUSG00000029797	NonProperStrand	94	2	-15.9721
chr10	23505559	23505610	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	chr4	86232359	86232459	snoRNA	ENSMUSG00000088958_Scarna8	.	ENSMUSG00000088958	ProperStrand	366	1	-4.0306
chr1	137367468	137367484	protein_coding	Nav1	exon	ENSMUSG00000009418	ProperStrand	38	chr16	23110828	23110882	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.7634
chr3	158536789	158536869	LTR	MERVL_2A-int	ERVL	chr3MERVL_2A-int158534862	ProperStrand	1	chr7	93027537	93027627	LTR	MERVL-int	ERVL	chr7MERVL-int93026640	ProperStrand	2	1	-inf
chr5	138739587	138739788	protein_coding	Stag3	exon	ENSMUSG00000036928	ProperStrand	53	chr4	131908236	131908354	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	10	-19.6204
chr3	82829081	82829098	LINE	L1MA7	L1	chr3L1MA782828965	ProperStrand	8	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-9.2953
chr4	48663194	48663251	protein_coding	Tmeff1	exon	ENSMUSG00000028347	ProperStrand	47	chr14	76247712	76247802	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-4.6383
chr19	45850698	45851400	protein_coding	Mgea5	exon	ENSMUSG00000025220	ProperStrand	53	chr12	60774075	60774109	snoRNA	ENSMUSG00000077603_SNORA3	.	ENSMUSG00000077603	ProperStrand	185	1	-11.3040
chr10	28119269	28119286	protein_coding	Ptprk	intron	ENSMUSG00000019889	ProperStrand	45	chr3	153575089	153575116	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	1	-9.0729
chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	chr16	90386834	90386852	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	1	-8.1739
chr11	55296195	55296332	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	chr10	127895516	127895537	tRNA	tRNA688-SerCGA	.	1424546	ProperStrand	71	1	-5.8487
chr11	78059298	78059314	protein_coding	Supt6h	utr5	ENSMUSG00000002052	ProperStrand	119	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.8323
chr17	84840300	84840318	protein_coding	Thada	utr3	ENSMUSG00000024251	NonProperStrand	18	chr18	73693166	73693187	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-7.9292
chr7	133636039	133636057	protein_coding	Atxn2l	utr3	ENSMUSG00000032637	NonProperStrand	8	chr9	15119646	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-6.5261
chr3	15843606	15843628	LTR	RMER17D	ERVK	chr3RMER17D15843203	ProperStrand	1	chr7	116663632	116663746	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-inf
chr3	36768975	36773121	protein_coding	4932438A13Rik	exon	ENSMUSG00000037270	ProperStrand	96	chr5	121655039	121655129	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-5.0158
chr7	120098784	120098801	pseudogene	Rassf10	.	ENSMUSG00000048962	ProperStrand	5	chr16	23110828	23110873	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr1	135519671	135521063	protein_coding	Zc3h11a	exon	ENSMUSG00000026464	ProperStrand	102	chr5	123622050	123622066	protein_coding	Hpd	exon	ENSMUSG00000029445	ProperStrand	254	1	-9.3558
chr7	5019208	5027078	protein_coding	U2af2	exon	ENSMUSG00000030435	ProperStrand	103	chr18	35716782	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-4.0181
chr7	150688320	150688376	protein_coding	Phlda2	exon	ENSMUSG00000010760	ProperStrand	8	chr10	23505196	23505258	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.7871
chr11	76052965	76053065	protein_coding	Glod4	exon	ENSMUSG00000017286	ProperStrand	23	chr7	29136577	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.1043
chr1	134013667	134013724	protein_coding	Cdk18	intron	ENSMUSG00000026437	ProperStrand	51	chr12	88488443	88496424	protein_coding	Pomt2	exon	ENSMUSG00000034126	NonProperStrand	331	1	-10.2185
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr13	96102551	96102617	protein_coding	Zbed3	intron	ENSMUSG00000041995	ProperStrand	33	2	-9.9722
chr10	40654387	40654434	protein_coding	Wasf1	exon	ENSMUSG00000019831	ProperStrand	12	chr15	72376666	72376682	protein_coding	Kcnk9	exon	ENSMUSG00000036760	NonProperStrand	42	1	-17.2626
chr18	42467858	42467925	protein_coding	Rbm27	intron	ENSMUSG00000024491	ProperStrand	38	chr11	106362618	106362635	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-8.3192
chr6	97125941	97125957	protein_coding	Tmf1	exon	ENSMUSG00000030059	ProperStrand	33	chr11	106362638	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-8.6034
chr2	153512388	153512468	protein_coding	Dnmt3b	utr3	ENSMUSG00000027478	ProperStrand	19	chr7	150717328	150717418	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-7.8014
chr19	5799312	5799402	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr16	96240555	96240635	protein_coding	Brwd1	intron	ENSMUSG00000022914	ProperStrand	77	1	-7.0481
chr9	88419023	88419041	SINE	B4	B4	chr9B488418988	ProperStrand	75	chr7	52715046	52715089	protein_coding	Ftl1	utr5	ENSMUSG00000050708	ProperStrand	807	1	-7.6712
chr13	74195757	74195786	protein_coding	Cep72	exon	ENSMUSG00000021572	ProperStrand	10	chr3	25780837	25780854	protein_coding	Nlgn1	intron	ENSMUSG00000063887	NonProperStrand	37	1	-17.7383
chr9	81949793	81949813	protein_coding	Mei4	intron	ENSMUSG00000043289	NonProperStrand	42	chr9	120038561	120038672	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.6915
chr12	37040848	37040865	protein_coding	Sostdc1	utr5	ENSMUSG00000036169	NonProperStrand	13	chr5	130300446	130300536	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-5.3899
chr4	104892018	104892035	protein_coding	Ppap2b	exon	ENSMUSG00000028517	ProperStrand	8	chr2	26493406	26493493	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-12.5943
chr17	37526189	37526205	LINE	L1M3	L1	chr17L1M337526142	NonProperStrand	1	chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	1	-inf
chr6	119303538	119311878	protein_coding	Adipor2	utr3	ENSMUSG00000030168	ProperStrand	79	chr4	131865855	131865989	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	14	-inf
chr7	127801093	127801152	protein_coding	Uqcrc2	exon	ENSMUSG00000030884	ProperStrand	26	chr19	8799046	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	4	-20.0669
chr4	84852178	84852208	protein_coding	Sh3gl2	intron	ENSMUSG00000028488	ProperStrand	12	chr7	116663634	116663724	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	6	-inf
chr13	49063484	49063501	Simple_repeat	(CGG)n	Simple_repeat	chr13(CGG)n49063435	NonProperStrand	1	chr19	46836213	46836229	protein_coding	Cnnm2	utr5	ENSMUSG00000064105	NonProperStrand	19	1	-inf
chr4	131865856	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr7	88674740	88674830	snoRNA	ENSMUSG00000093107_AC167122.1	.	ENSMUSG00000093107	ProperStrand	110	2	-1.8518
chr7	123476600	123477214	protein_coding	Rps13	exon	ENSMUSG00000090862	ProperStrand	36	chr10	110918644	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-4.4089
chr7	31369522	31369568	protein_coding	Wbp7	exon	ENSMUSG00000006307	ProperStrand	180	chr1	87791353	87799589	protein_coding	Itm2c	exon	ENSMUSG00000026223	ProperStrand	21	1	-13.2375
chr4	11118669	11118689	protein_coding	Ccne2	utr5	ENSMUSG00000028212	NonProperStrand	3	chr2	79843543	79843559	protein_coding	Pde1a	intron	ENSMUSG00000059173	NonProperStrand	275	1	-16.7288
chr16	57391762	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr6	48017352	48032245	protein_coding	Zfp746	exon	ENSMUSG00000057691	ProperStrand	23	1	-9.7264
chr15	62076755	62076797	lincRNA	Pvt1	intron	ENSMUSG00000072566	ProperStrand	51	chr4	11912903	11912920	lincRNA	Gm17454	intron	ENSMUSG00000090438	NonProperStrand	2	1	-inf
chr12	87861199	87861251	protein_coding	Esrrb	utr3	ENSMUSG00000021255	ProperStrand	254	chr7	133726521	133726538	protein_coding	Cln3	exon	ENSMUSG00000030720	ProperStrand	87	1	-9.6743
chr2	90235290	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	76614453	76614470	protein_coding	Ptprd	intron	ENSMUSG00000028399	ProperStrand	198	6	-13.4995
chr8	73033214	73033255	protein_coding	2810422J05Rik	exon	ENSMUSG00000055553	NonProperStrand	3	chr7	29136634	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	NonProperStrand	27	1	-21.2276
chr11	97489600	97489617	protein_coding	E130012A19Rik	exon	ENSMUSG00000043439	NonProperStrand	110	chr16	3856858	3856878	protein_coding	Zfp174	utr3	ENSMUSG00000054939	NonProperStrand	166	1	-10.0544
chr11	84124848	84124942	protein_coding	Acaca	exon	ENSMUSG00000020532	ProperStrand	100	chr2	166890796	166890858	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	1	-9.3566
chr2	32818803	32818893	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	chr2	130103752	130103808	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	2	-2.3634
chr9	21041613	21041659	protein_coding	Keap1	exon	ENSMUSG00000003308	ProperStrand	9	chr7	148634727	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-7.7646
chr16	31881961	31882051	protein_coding	Mfi2	exon	ENSMUSG00000022780	ProperStrand	10	chr11	51551312	51551392	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	1	-11.3544
chr10	77060495	77060595	protein_coding	Pttg1ip	utr3	ENSMUSG00000009291	ProperStrand	28	chr16	23111458	23111503	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	7	-17.5937
chr9	40196620	40196728	protein_coding	Gramd1b	intron	ENSMUSG00000040111	ProperStrand	40	chr18	73693164	73693186	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	5	-inf
chr4	107533755	107533786	protein_coding	Lrp8	exon	ENSMUSG00000028613	ProperStrand	9	chr9	107810701	107813856	protein_coding	Mst1r	exon	ENSMUSG00000032584	NonProperStrand	30	1	-19.1361
chr4	131865358	131865459	lincRNA	Snhg12	intron	ENSMUSG00000086290	ProperStrand	178	chr7	52381973	52382010	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-4.5916
chr11	70219800	70223298	protein_coding	Pelp1	exon	ENSMUSG00000018921	ProperStrand	64	chr7	116663634	116663710	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-4.2563
chr1	95405660	95405780	protein_coding	Sept2	utr3	ENSMUSG00000026276	ProperStrand	136	chr11	115275132	115275168	tRNA	tRNA1023-ArgTCG	.	315571	ProperStrand	15	4	-20.5432
chr1	153602594	153654604	protein_coding	Edem3	utr5	ENSMUSG00000043019	ProperStrand	84	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	3	-7.6143
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr7	34992750	34992767	protein_coding	Gpi1	exon	ENSMUSG00000036427	NonProperStrand	40	1	-9.7202
chr4	133628939	133628955	protein_coding	Aim1l	exon	ENSMUSG00000012123	ProperStrand	32	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.8186
chr15	79585216	79585232	lincRNA	Gm16576	exon	ENSMUSG00000087543	NonProperStrand	55	chr11	6428108	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.3504
chr9	102968706	102968723	protein_coding	Slco2a1	intron	ENSMUSG00000032548	NonProperStrand	6	chr4	131865856	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-6.1051
chr3	88125550	88125606	protein_coding	Cct3	utr3	ENSMUSG00000001416	ProperStrand	82	chr15	82725599	82725636	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	2	-12.6129
chr7	20281945	20281965	protein_coding	Apoe	exon	ENSMUSG00000002985	ProperStrand	231	chr4	82891003	82891019	protein_coding	Ttc39b	exon	ENSMUSG00000038172	ProperStrand	78	1	-10.0830
chr2	126966433	126966533	protein_coding	Itpripl1	utr3	ENSMUSG00000074825	ProperStrand	22	chr18	33954912	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-5.4296
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr14	52829458	52829550	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	2	-6.1222
chr7	31743093	31743149	protein_coding	Lsr	exon	ENSMUSG00000001247	ProperStrand	8	chr4	131908689	131908751	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.7736
chr4	8769991	8770009	protein_coding	Chd7	intron	ENSMUSG00000041235	NonProperStrand	45	chr2	26494778	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.6333
chr2	29757720	29757805	protein_coding	Odf2	exon	ENSMUSG00000026790	ProperStrand	58	chr10	110918549	110918639	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-5.9784
chr17	47743938	47747943	protein_coding	Bysl	exon	ENSMUSG00000023988	ProperStrand	48	chr17	24856620	24856690	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-6.8699
chr7	149170855	149171340	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	chrX	71517833	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	8	-20.2728
chr11	100414998	100415014	protein_coding	Ttc25	exon	ENSMUSG00000006784	NonProperStrand	119	chr10	79719389	79719489	protein_coding	Ndufs7	utr3	ENSMUSG00000020153	ProperStrand	15	1	-14.7606
chr3	144817605	144817621	LINE	Lx9	L1	chr3Lx9144817450	ProperStrand	30	chr16	23111373	23111429	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.3326
chr10	23899750	23899817	protein_coding	Stx7	exon	ENSMUSG00000019998	ProperStrand	3	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-8.4253
chr2	27866775	27866791	protein_coding	Col5a1	exon	ENSMUSG00000026837	ProperStrand	35	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-10.0123
chr2	158451026	158451043	protein_coding	Actr5	exon	ENSMUSG00000037761	NonProperStrand	94	chr4	138972501	138972775	protein_coding	Ubr4	exon	ENSMUSG00000066036	ProperStrand	304	2	-14.5017
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr11	62416603	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-2.3703
chr15	88986061	88986163	protein_coding	Plxnb2	utr3	ENSMUSG00000036606	ProperStrand	119	chr8	60437146	60437162	protein_coding	Galntl6	exon	ENSMUSG00000061864	ProperStrand	44	1	-12.5647
chrX	99380369	99380406	protein_coding	Rps4x	exon	ENSMUSG00000031320	ProperStrand	139	chr7	118219574	118219643	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-2.6417
mmu-miR-2137	0	19	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	chr8	73419649	73419785	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	6	-10.9387
chr13	53073980	53073997	protein_coding	Nfil3	intron	ENSMUSG00000056749	NonProperStrand	66	chr4	131865393	131865456	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-3.8235
chr2	29863411	29863501	protein_coding	Spna2	exon	ENSMUSG00000057738	ProperStrand	222	chr15	34370573	34370653	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-2.5902
chr9	70273596	70273644	protein_coding	Rnf111	utr3	ENSMUSG00000032217	ProperStrand	33	chr2	166888977	166888998	snoRNA	ENSMUSG00000077515_SNORD12	.	ENSMUSG00000077515	ProperStrand	191	1	-12.1977
chr13	67508605	67508653	protein_coding	Zfp459	utr3	ENSMUSG00000055560	ProperStrand	5	chr4	131865391	131865481	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-9.0535
chr7	52378401	52378479	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	chr11	68887040	68887065	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	3	-1.8107
chr1	59752841	59752922	protein_coding	Nop58	exon	ENSMUSG00000026020	ProperStrand	104	chr16	23111778	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.1039
chr5	24079501	24079527	protein_coding	Abcf2	exon	ENSMUSG00000028953	ProperStrand	50	chr16	23110904	23111004	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	NonProperStrand	93	1	-12.8010
chr7	108971290	108971306	protein_coding	Inppl1	utr3	ENSMUSG00000032737	ProperStrand	272	chr19	8799581	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-3.8450
chr6	83725032	83725069	protein_coding	Tex261	exon	ENSMUSG00000014748	ProperStrand	13	chr8	32260335	32260432	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	2	-12.3835
chr15	102066531	102066621	protein_coding	Rarg	exon	ENSMUSG00000001288	ProperStrand	156	chr7	29136537	29136617	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-0.9495
chr12	21303713	21308329	protein_coding	Cpsf3	exon	ENSMUSG00000054309	ProperStrand	24	chr16	23110959	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.6072
chr18	35102298	35102341	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	chr2	166888994	166889033	snoRNA	ENSMUSG00000077515_SNORD12	.	ENSMUSG00000077515	ProperStrand	191	1	-4.3401
chr7	114255687	114255705	LTR	RMER2	ERV1	chr7RMER2114255330	ProperStrand	3	chr4	131865855	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.6896
chrX	54499639	54502144	protein_coding	Arhgef6	exon	ENSMUSG00000031133	ProperStrand	20	chr12	17552949	17552983	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-7.2696
chr11	60020003	60020059	protein_coding	Srebf1	exon	ENSMUSG00000020538	ProperStrand	24	chr3	89750435	89750451	protein_coding	Atp8b2	exon	ENSMUSG00000060671	ProperStrand	140	1	-13.4668
chr7	38585790	38585807	LINE	L1MC	L1	chr7L1MC38585450	NonProperStrand	2	chr11	62416621	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-12.5746
chr9	86468066	86468103	protein_coding	Rwdd2a	exon	ENSMUSG00000032417	ProperStrand	5	chr11	68886993	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	4	-19.4642
chr19	5898477	5898529	protein_coding	Dpf2	utr3	ENSMUSG00000024826	ProperStrand	38	chr8	129468746	129468797	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-5.2970
chr1	24619330	24619397	protein_coding	Gm10222	exon	ENSMUSG00000067736	ProperStrand	42	chr4	116827118	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-7.7524
chr10	118650854	118652314	protein_coding	Cand1	exon	ENSMUSG00000020114	ProperStrand	76	chr2	145076805	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-7.2524
chr7	97605614	97605630	protein_coding	Tmem126a	utr5	ENSMUSG00000030615	ProperStrand	22	chr16	23110940	23110957	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.4786
chr16	30467199	30467217	LTR	RLTR20B2	ERVK	chr16RLTR20B230467017	ProperStrand	2	chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	1	-15.2450
chr15	60661083	60661099	lincRNA	9930014A18Rik	exon	ENSMUSG00000044513	ProperStrand	54	chr18	74938284	74938374	snoRNA	ENSMUSG00000089235_SCARNA17	.	ENSMUSG00000089235	ProperStrand	1128	1	-7.6633
chr6	47738068	47738097	misc_RNA	Y_RNA	.	ENSMUSG00000065701	ProperStrand	129	chr5	115939536	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	7	-19.4719
chr8	87211377	87211415	protein_coding	Nacc1	intron	ENSMUSG00000001910	ProperStrand	130	chr5	54389948	54389964	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	1	-9.2314
chr5	136486222	136487966	protein_coding	Dtx2	exon	ENSMUSG00000004947	ProperStrand	10	chr8	129468751	129468831	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-7.9945
chr2	166740674	166740712	protein_coding	Cse1l	utr5	ENSMUSG00000002718	ProperStrand	22	chr7	150717334	150717424	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-7.5037
chr4	115484059	115484086	protein_coding	Atpaf1	utr3	ENSMUSG00000028710	ProperStrand	202	chr7	117166722	117166782	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-2.5826
chr5	148347995	148348102	protein_coding	Pan3	exon	ENSMUSG00000029647	ProperStrand	57	chr11	6428101	6428154	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.2853
chr3	87781966	87781982	protein_coding	Nes	exon	ENSMUSG00000004891	ProperStrand	3	chr7	117189863	117189909	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-12.5479
chr4	116283694	116283762	protein_coding	Nasp	exon	ENSMUSG00000028693	ProperStrand	64	chr7	117189947	117190015	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	3	-8.1190
chr2	153695734	153695751	protein_coding	Sun5	intron	ENSMUSG00000027480	NonProperStrand	2	chr10	90581031	90581131	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-12.1998
chr9	15118425	15118450	protein_coding	Taf1d	utr3	ENSMUSG00000031939	ProperStrand	363	chr1	162966831	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-2.8550
chr6	82684856	82684890	protein_coding	Hk2	exon	ENSMUSG00000000628	ProperStrand	88	chr16	23111770	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.3296
chr11	106852487	106852544	protein_coding	Kpna2	exon	ENSMUSG00000018362	ProperStrand	70	chr4	43703758	43703791	protein_coding	Tmem8b	utr3	ENSMUSG00000078716	ProperStrand	3	1	-21.3208
chr3	108183723	108183739	lincRNA	Gm12522	exon	ENSMUSG00000074281	ProperStrand	1	chr9	120038552	120038608	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-inf
chr5	91010226	91010243	SINE	MIRc	MIR	chr5MIRc91010147	ProperStrand	3	chr4	131908352	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-7.2242
chr17	23955098	23955164	protein_coding	Srrm2	utr3	ENSMUSG00000039218	ProperStrand	521	chr3	108357610	108357665	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-0.9440
chr6	88674981	88674999	protein_coding	Mgll	utr5	ENSMUSG00000033174	ProperStrand	10	chr3	123210934	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.4047
chr15	82980089	82980189	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr19	25016725	25016791	snoRNA	ENSMUSG00000064896_SNORA19	.	ENSMUSG00000064896	ProperStrand	88	1	-6.3805
chr8	87083463	87083480	protein_coding	Cacna1a	exon	ENSMUSG00000034656	NonProperStrand	37	chr10	90581031	90581080	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-5.7505
chr1	191677617	191677717	protein_coding	Ptpn14	intron	ENSMUSG00000026604	ProperStrand	74	chr16	23111451	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.9842
chrX	110124631	110124650	LINE	L1_Mur2	L1	chrXL1_Mur2110124069	NonProperStrand	1	chr4	43505810	43505900	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	1	-inf
chr3	94837623	94837854	protein_coding	Psmd4	exon	ENSMUSG00000005625	ProperStrand	20	chrX	54644661	54644698	snoRNA	ENSMUSG00000065110_Snord61	.	ENSMUSG00000065110	ProperStrand	40	1	-16.3729
chr17	23955820	23955837	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	chr12	106269287	106269387	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-2.4837
chr6	87793682	87793726	protein_coding	Cnbp	utr3	ENSMUSG00000030057	ProperStrand	46	chr4	131908236	131908298	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.8186
chr15	7835631	7835679	protein_coding	Wdr70	exon	ENSMUSG00000039828	ProperStrand	16	chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-10.5385
chr6	125071329	125080015	protein_coding	Chd4	exon	ENSMUSG00000063870	ProperStrand	303	chr11	69483136	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	6	-4.3434
chr11	102294643	102294847	protein_coding	Grn	exon	ENSMUSG00000034708	ProperStrand	43	chr11	97642952	97643006	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.0564
chrX	71517862	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	chr7	116664794	116664926	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	21	-3.7379
chr7	134591889	134592204	protein_coding	Zfp689	exon	ENSMUSG00000048921	ProperStrand	4	chrX	34622906	34622924	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-8.6589
chr15	96409996	96410040	protein_coding	Slc38a1	intron	ENSMUSG00000023169	ProperStrand	69	chr19	9051807	9051837	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	1	-9.1839
chr1	89091564	89092064	protein_coding	Chrnd	exon	ENSMUSG00000026251	ProperStrand	32	chr10	23505559	23505627	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-8.8120
chr6	124761083	124761166	protein_coding	Tpi1	utr3	ENSMUSG00000023456	ProperStrand	94	chr3	113827103	113827119	protein_coding	Col11a1	utr3	ENSMUSG00000027966	NonProperStrand	139	1	-10.7244
chr9	16550180	16550270	LINE	L1_Mus1	L1	chr9L1_Mus116548730	NonProperStrand	1	chr9	16550296	16550386	LINE	L1_Mus2	L1	chr9L1_Mus216550269	NonProperStrand	1	1	-inf
chr9	104218697	104218714	protein_coding	Acpp	intron	ENSMUSG00000032561	ProperStrand	17	chr2	32086480	32086504	protein_coding	Prrc2b	utr3	ENSMUSG00000039262	ProperStrand	344	1	-12.3752
chr2	9985901	9985917	protein_coding	Atp5c1	exon	ENSMUSG00000025781	ProperStrand	138	chr4	131865855	131865928	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.4053
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr18	63109676	63109692	protein_coding	Apcdd1	exon	ENSMUSG00000071847	NonProperStrand	254	1	-6.4989
chr1	63260754	63260771	protein_coding	Gpr1	utr5	ENSMUSG00000046856	NonProperStrand	32	chr12	106269300	106269443	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-5.3536
chr12	114290175	114290191	protein_coding	Pacs2	intron	ENSMUSG00000021143	NonProperStrand	302	chr8	73033196	73033250	protein_coding	2810422J05Rik	exon	ENSMUSG00000055553	ProperStrand	171	1	-7.9804
chr8	73905665	73905716	protein_coding	Nr2f6	utr5	ENSMUSG00000002393	ProperStrand	4	chr8	87434646	87434662	protein_coding	Dnase2a	exon	ENSMUSG00000003812	ProperStrand	8	1	-19.3161
chr19	53400383	53400429	protein_coding	Mxi1	intron	ENSMUSG00000025025	ProperStrand	51	chr8	77742558	77742574	protein_coding	Rasd2	exon	ENSMUSG00000034472	NonProperStrand	237	1	-10.8861
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr1	91358413	91358430	protein_coding	Agap1	intron	ENSMUSG00000055013	ProperStrand	229	1	-7.7283
chr5	125029026	125029042	protein_coding	Eif2b1	utr5	ENSMUSG00000029388	ProperStrand	51	chr12	17553062	17553090	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-5.4057
chr9	20303912	20303928	protein_coding	Zfp266	exon	ENSMUSG00000060510	ProperStrand	20	chr4	131908236	131908328	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-8.3399
chr15	12835362	12835396	protein_coding	Drosha	exon	ENSMUSG00000022191	ProperStrand	163	chr6	85165490	85165593	protein_coding	Sfxn5	utr3	ENSMUSG00000033720	ProperStrand	26	4	-19.3975
chr10	127021391	127021409	protein_coding	Lrp1	exon	ENSMUSG00000040249	ProperStrand	151	chr14	33005038	33005093	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-2.3405
chr13	74743186	74743240	LTR	ORR1A4-int	MaLR	chr13ORR1A4-int74742668	ProperStrand	4	chr16	23110828	23110889	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-8.2228
chr19	27292699	27292716	protein_coding	Vldlr	intron	ENSMUSG00000024924	NonProperStrand	36	chr9	61260718	61260799	protein_coding	Tle3	exon	ENSMUSG00000032280	ProperStrand	88	1	-13.5742
chr18	61740048	61747102	protein_coding	Csnk1a1	exon	ENSMUSG00000024576	ProperStrand	64	chr7	116663639	116663729	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-4.2563
chr9	43032089	43032157	protein_coding	Oaf	exon	ENSMUSG00000032014	ProperStrand	4	chr5	130295413	130295503	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-10.8690
chr4	116862585	116862662	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	chr17	35087895	35087929	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-1.2978
chr11	102067766	102067783	protein_coding	Hdac5	exon	ENSMUSG00000008855	NonProperStrand	39	chr7	116663665	116663754	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.2756
chr5	108332834	108333812	protein_coding	Rpl5	exon	ENSMUSG00000058558	ProperStrand	235	chr5	74489595	74489678	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	2	-2.7470
chr5	34234244	34234262	protein_coding	Whsc1	utr5	ENSMUSG00000057406	ProperStrand	409	chr11	55296195	55296258	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-2.5783
chr2	69193630	69193667	LINE	L1Md_F2	L1	chr2L1Md_F269191897	ProperStrand	54	chr10	23505152	23505215	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-2.6249
chr11	48666280	48666298	lincRNA	Gm16170	exon	ENSMUSG00000086245	ProperStrand	1	chr18	35716762	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-inf
chr5	35222565	35225588	protein_coding	Htt	exon	ENSMUSG00000029104	ProperStrand	73	chr11	97642952	97643014	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.1433
chr12	111808988	111809064	protein_coding	Ppp2r5c	intron	ENSMUSG00000017843	ProperStrand	36	chr5	130300473	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.4201
chr10	95011897	95011985	protein_coding	Nudt4	utr3	ENSMUSG00000020029	ProperStrand	32	chr7	30026273	30026289	protein_coding	Yif1b	intron	ENSMUSG00000030588	ProperStrand	154	1	-12.6915
chr15	79910840	79910919	protein_coding	Rpl3	exon	ENSMUSG00000060036	ProperStrand	8342	chr4	111928995	111929011	protein_coding	Skint3	intron	ENSMUSG00000070868	NonProperStrand	48	1	-4.0091
chr10	110910357	110910384	protein_coding	Nap1l1	utr5	ENSMUSG00000058799	ProperStrand	185	chr1	89681329	89681380	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-3.3098
chr11	63112752	63112770	SINE	B4	B4	chr11B463112741	NonProperStrand	1	chr19	8798743	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-inf
chr14	25310985	25311013	protein_coding	Rps24	exon	ENSMUSG00000025290	ProperStrand	110	chr9	15119650	15119713	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.6419
chr11	106647550	106647619	protein_coding	Ddx5	exon	ENSMUSG00000020719	ProperStrand	181	chr7	148634766	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-2.0362
chr1	137281708	137281753	protein_coding	Ipo9	utr3	ENSMUSG00000041879	ProperStrand	53	chr15	34370545	34370614	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	6	-19.8441
chr1	181027187	181027205	protein_coding	Smyd3	intron	ENSMUSG00000055067	ProperStrand	231	chr17	24342579	24342596	protein_coding	Ntn3	utr3	ENSMUSG00000079662	ProperStrand	237	1	-7.8641
chr12	13232242	13234165	protein_coding	Ddx1	exon	ENSMUSG00000037149	ProperStrand	47	chr2	26768408	26768431	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-6.0819
chr2	181117253	181117343	protein_coding-noncoding	Zgpat	utr5	ENSMUSG00000027582	ProperStrand	1	chr2	181116892	181116982	protein_coding	Lime1	utr5	ENSMUSG00000090077	ProperStrand	7	1	-inf
chr8	123181499	123181553	protein_coding	Cox4nb	utr3	ENSMUSG00000031819	ProperStrand	21	chr2	130101242	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	3	-19.0529
chr13	97420349	97420367	protein_coding	Hmgcr	utr3	ENSMUSG00000021670	ProperStrand	56	chr8	32260335	32260424	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-4.7627
chr18	35102297	35102342	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	chr14	52829492	52829569	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-1.8750
chr11	43251708	43251725	protein_coding	Slu7	exon	ENSMUSG00000020409	ProperStrand	7	chr5	108334209	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-9.1759
chrX	34589398	34589415	protein_coding	Sowahd	exon	ENSMUSG00000044400	ProperStrand	26	chr4	131865855	131865907	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.1929
chr5	66760807	66760824	protein_coding	Apbb2	intron	ENSMUSG00000029207	ProperStrand	25	chr19	8799579	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-8.5225
chr11	115999916	115999932	protein_coding	Mrpl38	exon	ENSMUSG00000020775	NonProperStrand	65	chr17	23955820	23955839	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	1	-11.3134
chr13	55391546	55403174	protein_coding	Nsd1	exon	ENSMUSG00000021488	ProperStrand	186	chr19	8799021	8799083	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	3	-9.0212
chr9	88419023	88419041	SINE	B4	B4	chr9B488418988	ProperStrand	75	chr3	68889150	68889255	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-2.8572
chr17	24858606	24858637	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr17	35089181	35089233	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	2	-3.8215
chr4	131908688	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	chr3	88497864	88497981	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	20	-0.7706
chr17	23961566	23961650	protein_coding	Srrm2	utr3	ENSMUSG00000039218	ProperStrand	521	chr8	32260334	32260424	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-1.0021
chr12	113032821	113032838	protein_coding	Klc1	utr3	ENSMUSG00000021288	NonProperStrand	5	chr19	38869531	38869547	protein_coding	Noc3l	exon	ENSMUSG00000024999	NonProperStrand	149	1	-16.6179
chr19	4803438	4803455	protein_coding	Rbm14	exon	ENSMUSG00000006456	NonProperStrand	16	chr11	20012671	20012689	protein_coding	Actr2	intron	ENSMUSG00000020152	NonProperStrand	17	1	-19.0364
chr9	120888565	120888610	protein_coding	Ulk4	intron	ENSMUSG00000040936	NonProperStrand	18	chr17	24857738	24857781	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.5014
chr8	29120016	29120033	LINE	L2a	L2	chr8L2a29119900	ProperStrand	1	chr2	156218216	156218294	protein_coding	2900097C17Rik	exon	ENSMUSG00000067833	ProperStrand	7	1	-inf
chr15	79542590	79543824	protein_coding	Gtpbp1	exon	ENSMUSG00000042535	ProperStrand	56	chr10	90581059	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-4.9405
chr2	77287573	77287592	protein_coding	Zfp385b	intron	ENSMUSG00000027016	NonProperStrand	17	chr19	8798484	8798553	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-12.4277
chr6	24684480	24684497	protein_coding	Hyal6	exon	ENSMUSG00000029679	NonProperStrand	114	chr7	116663692	116663763	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.4872
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr18	37999701	37999779	protein_coding	Pcdhga9	exon	ENSMUSG00000023036	ProperStrand	245	4	-8.6200
chr12	39229089	39229108	protein_coding	Dgkb	intron	ENSMUSG00000036095	ProperStrand	19	chr4	131908686	131908791	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-5.3903
chr17	26792627	26792687	protein_coding	Ergic1	utr3	ENSMUSG00000001576	ProperStrand	114	chr5	130300531	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.4854
chr15	74392750	74392768	protein_coding	Bai1	intron	ENSMUSG00000034730	NonProperStrand	56	chr7	29136525	29136588	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-4.3853
chr7	13846274	13846290	protein_coding	6330408A02Rik	utr3	ENSMUSG00000070814	ProperStrand	10	chr12	88912985	88913005	protein_coding	Gm2022	intron	ENSMUSG00000071217	NonProperStrand	57	1	-17.0509
chr1	34245351	34304633	protein_coding	Dst	utr5	ENSMUSG00000026131	ProperStrand	461	chr9	64022855	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	2	-6.7787
chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	chr18	63109676	63109692	protein_coding	Apcdd1	exon	ENSMUSG00000071847	NonProperStrand	254	1	-7.7352
chr13	23647348	23647448	protein_coding	Hist1h1d	exon	ENSMUSG00000052565	ProperStrand	78	chr4	116826700	116826763	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-6.2626
chr2	90235315	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	41471533	41471559	protein_coding	Efha2	utr3	ENSMUSG00000039478	ProperStrand	5	1	-9.5409
chr6	87930450	87930550	protein_coding	H1fx	utr3	ENSMUSG00000044927	ProperStrand	13	chr1	162967537	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-6.4551
chr3	30795647	30795694	protein_coding	Gpr160	exon	ENSMUSG00000037661	ProperStrand	4	chr1	162967493	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	3	-19.8676
chr3	88390842	88391848	protein_coding	Ssr2	exon	ENSMUSG00000041355	ProperStrand	22	chr16	23110961	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.4786
chr15	85095790	85115474	protein_coding	Fbln1	exon	ENSMUSG00000006369	ProperStrand	32	chr7	116663687	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-6.1987
chr19	8963027	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	chr11	68876541	68876583	tRNA	tRNA1821-SerGCT	.	1023200	ProperStrand	39	1	-3.0232
chr1	123084498	123084578	LINE	L1MD1	L1	chr1L1MD1123084007	NonProperStrand	1	chr1	123084820	123084910	LINE	L1MD1	L1	chr1L1MD1123084807	NonProperStrand	1	1	-inf
chr3	157729963	157729979	protein_coding	Lrrc40	utr3	ENSMUSG00000063052	ProperStrand	147	chr4	131865855	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-2.1962
chr16	23984948	23985044	protein_coding	Bcl6	intron	ENSMUSG00000022508	ProperStrand	4	chr16	23111779	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-7.1763
chr14	31373009	31373787	protein_coding	Tkt	exon	ENSMUSG00000021957	ProperStrand	160	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-5.0593
chr9	107502699	107502798	protein_coding	Sema3b	exon	ENSMUSG00000057969	ProperStrand	4	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-17.4456
chr18	49857767	49857819	protein_coding	Dtwd2	utr3	ENSMUSG00000024505	ProperStrand	11	chr11	102294588	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	2	-20.9126
chr19	46943429	46943473	protein_coding	Cnnm2	intron	ENSMUSG00000064105	ProperStrand	18	chr12	112779226	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	3	-16.2789
chr13	73926065	73926116	protein_coding	Slc12a7	exon	ENSMUSG00000017756	ProperStrand	80	chr9	119664282	119664299	protein_coding	Scn11a	exon	ENSMUSG00000034115	ProperStrand	55	1	-12.9102
chr14	22663150	22664456	protein_coding	Vdac2	exon	ENSMUSG00000021771	ProperStrand	18	chr19	8799845	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-7.3371
chr2	172189199	172189943	protein_coding	Aurka	exon	ENSMUSG00000027496	ProperStrand	31	chr15	98350177	98350257	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-6.0531
chr15	54898592	54898654	protein_coding	Taf2	intron	ENSMUSG00000037343	ProperStrand	18	chr16	23110549	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.6884
chr12	80220922	80220940	SINE	ID_B1	B4	chr12ID_B180220773	ProperStrand	1	chr13	23654186	23654226	protein_coding	Hist1h3e	exon	ENSMUSG00000069273	ProperStrand	30	1	-inf
chr5	115956842	115956858	protein_coding	Pxn	utr5	ENSMUSG00000029528	ProperStrand	171	chr6	71832629	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-3.6133
chr7	4081441	4081531	protein_coding-noncoding	Ttyh1	utr5	ENSMUSG00000030428	ProperStrand	4	chr7	4081240	4081320	protein_coding	Ttyh1	intron	ENSMUSG00000030428	ProperStrand	10	1	-19.3291
chr6	72555671	72555771	protein_coding	Retsat	intron	ENSMUSG00000056666	NonProperStrand	8	chr11	62416581	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	4	-20.7782
chr13	58497548	58497590	protein_coding	Hnrnpk	exon	ENSMUSG00000021546	ProperStrand	117	chr4	41158542	41158581	snoRNA	ENSMUSG00000089308_SNORD121A	.	ENSMUSG00000089308	ProperStrand	209	1	-9.4705
chr7	3657429	3657473	protein_coding	Rps9	exon	ENSMUSG00000006333	ProperStrand	87	chr10	127520948	127521008	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	3	-17.4570
chr16	12095243	12095333	protein_coding	Shisa9	intron	ENSMUSG00000022494	ProperStrand	10	chr1	44054716	44054806	protein_coding	Tpp2	intron	ENSMUSG00000041763	NonProperStrand	5	1	-19.5370
chr3	107135379	107135479	protein_coding	Rbm15	exon	ENSMUSG00000048109	ProperStrand	82	chr2	130103459	130103502	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-7.4403
chr8	8639487	8660497	protein_coding	Efnb2	exon	ENSMUSG00000001300	NonProperStrand	14	chr2	70088799	70088818	protein_coding	Myo3b	intron	ENSMUSG00000042064	NonProperStrand	16	1	-19.1867
chr5	73563222	73563238	protein_coding	Fryl	intron	ENSMUSG00000070733	ProperStrand	173	chr11	6428088	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.4446
chr8	97897881	97897933	protein_coding	Mmp15	utr3	ENSMUSG00000031790	ProperStrand	13	chr9	15119737	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.5260
chr5	77777290	77777314	protein_coding	Polr2b	exon	ENSMUSG00000029250	ProperStrand	68	chr16	23111373	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-3.4470
chr19	36953780	36953892	protein_coding	Tnks2	exon	ENSMUSG00000024811	NonProperStrand	4	chr1	137279360	137279376	protein_coding	Ipo9	utr3	ENSMUSG00000041879	NonProperStrand	2	1	-inf
chr11	69481334	69481385	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	chr9	64143801	64143877	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	6	-1.3788
chr11	60590425	60590441	protein_coding	Top3a	exon	ENSMUSG00000002814	ProperStrand	28	chr9	15119630	15119656	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.0206
chr16	5256015	5256031	protein_coding	Fam86	utr5	ENSMUSG00000022544	ProperStrand	231	chr11	120208467	120208529	protein_coding	Actg1	exon	ENSMUSG00000062825	ProperStrand	178	1	-8.4334
chr11	51807252	51807342	protein_coding	Ube2b	intron	ENSMUSG00000020390	ProperStrand	57	chr18	35714211	35714290	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-3.5373
chr5	76358133	76358213	protein_coding-noncoding	Kdr	utr3	ENSMUSG00000062960	NonProperStrand	1	chr5	76358883	76358973	protein_coding	Kdr	intron	ENSMUSG00000062960	NonProperStrand	9	1	-inf
chr9	120864561	120866932	protein_coding	Ctnnb1	exon	ENSMUSG00000006932	ProperStrand	214	chr4	131865905	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-0.7011
chr7	149170854	149171340	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	chr4	131908236	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-0.7115
chr10	75971119	75973811	protein_coding	Mcm3ap	exon	ENSMUSG00000001150	ProperStrand	95	chr17	45725269	45725946	protein_coding	Slc29a1	exon	ENSMUSG00000023942	ProperStrand	95	1	-11.4666
chr12	60171196	60171403	protein_coding	Pnn	exon	ENSMUSG00000020994	ProperStrand	42	chr12	70260033	70260054	protein_coding	Rps29	utr5	ENSMUSG00000034892	ProperStrand	124	1	-12.5759
chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	chr13	35907911	35907988	protein_coding	Cdyl	exon	ENSMUSG00000059288	ProperStrand	18	1	-10.9430
chr5	144770132	144772355	protein_coding	Ccz1	exon	ENSMUSG00000029617	ProperStrand	10	chr16	23111453	23111505	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.3721
chr11	120673002	120673217	protein_coding	Fasn	exon	ENSMUSG00000025153	ProperStrand	298	chr17	13112482	13112517	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-1.7466
chr11	62416575	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	chr15	79908929	79909019	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	7	-1.4986
chr3	97545226	97545271	protein_coding	Pde4dip	exon	ENSMUSG00000038170	ProperStrand	25	chr7	116664811	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-10.1540
mmu-miR-6240	2	23	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr7	149076749	149076766	protein_coding	Tollip	intron	ENSMUSG00000025139	NonProperStrand	5	1	-11.0331
chr8	34722354	34725944	protein_coding	Ppp2cb	exon	ENSMUSG00000009630	ProperStrand	14	chr3	68889148	68889248	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	6	-inf
chr5	116062744	116063437	protein_coding	Gcn1l1	exon	ENSMUSG00000041638	ProperStrand	408	chr7	117166774	117166854	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-1.4629
chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	chr19	8798760	8798786	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-2.2308
chr1	94755366	94755386	protein_coding	Gpc1	utr3	ENSMUSG00000034220	ProperStrand	30	chr4	131865855	131865945	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.9337
chr17	24857731	24857819	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	chr14	63287579	63287609	snoRNA	ENSMUSG00000089531_SNORA73	.	ENSMUSG00000089531	ProperStrand	123	1	-1.2022
chr17	66686660	66707469	protein_coding	1110012J17Rik	exon	ENSMUSG00000052105	ProperStrand	60	chr16	23111374	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-2.4225
chr4	122968584	122968674	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	chr17	26360446	26360516	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	1	-3.1606
chr15	97618663	97618736	protein_coding	Slc48a1	intron	ENSMUSG00000081534	ProperStrand	16	chr18	35716843	35716883	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	5	-19.0390
chr4	96412508	96412526	protein_coding	Gm12695	intron	ENSMUSG00000078639	ProperStrand	110	chr11	106362556	106362590	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-6.2042
chr16	16323855	16324068	protein_coding	Dnm1l	exon	ENSMUSG00000022789	NonProperStrand	38	chr11	87172190	87172206	protein_coding	Ppm1e	exon	ENSMUSG00000046442	ProperStrand	112	2	-21.1459
chr9	72569146	72569314	protein_coding	Nedd4	exon	ENSMUSG00000032216	ProperStrand	308	chrX	34622910	34622990	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-0.7019
chr8	109185827	109189361	protein_coding	Cdh1	exon	ENSMUSG00000000303	ProperStrand	283	chr17	13112450	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	3	-5.0984
chr6	87772411	87775409	protein_coding	Isy1	exon	ENSMUSG00000030056	ProperStrand	172	chr11	69483200	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-0.8927
chr2	28326620	28326669	protein_coding	Mrps2	utr3	ENSMUSG00000035772	ProperStrand	8	chr12	60141473	60141509	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	3	-inf
chr8	23589037	23678719	protein_coding	Slc20a2	exon	ENSMUSG00000037656	ProperStrand	63	chr4	131908236	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	7	-11.9403
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr8	129468746	129468851	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	2	-1.5470
chr13	15934682	15934762	LINE	Lx9	L1	chr13Lx915934659	NonProperStrand	1	chr13	15934839	15934929	LINE	Lx9	L1	chr13Lx915934659	ProperStrand	1	1	-inf
chr18	35097354	35097402	protein_coding	Hspa9	utr3	ENSMUSG00000024359	ProperStrand	166	chr9	120038610	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-2.6119
chr13	100202251	100202289	protein_coding	Mtap1b	exon	ENSMUSG00000052727	ProperStrand	76	chr1	162965531	162965562	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.8527
chr12	88458385	88458947	protein_coding	Pomt2	exon	ENSMUSG00000034126	ProperStrand	15	chr16	23110563	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-8.4018
chr7	117945889	117945982	protein_coding	Ampd3	intron	ENSMUSG00000005686	ProperStrand	5	chr17	33820544	33820561	protein_coding	Hnrnpm	intron	ENSMUSG00000059208	ProperStrand	56	1	-18.3952
chr10	85456343	85456359	protein_coding	Bpifc	intron	ENSMUSG00000050108	ProperStrand	17	chr4	131865867	131865934	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.9909
chr5	136205283	136205395	protein_coding	Por	exon	ENSMUSG00000005514	ProperStrand	42	chr4	131908689	131908727	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.7439
chr5	138612970	138612986	protein_coding	Mcm7	utr5	ENSMUSG00000029730	ProperStrand	258	chrX	84483702	84483734	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-5.3696
chr10	84188827	84188927	protein_coding	Polr3b	utr3	ENSMUSG00000034453	ProperStrand	41	chr18	73693111	73693133	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-6.2740
chr8	93560367	93560424	protein_coding	Chd9	exon	ENSMUSG00000056608	ProperStrand	35	chr16	23109051	23109090	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-8.3615
chr17	41604285	41604375	LINE	Lx5	L1	chr17Lx541602827	NonProperStrand	1	chr4	9691410	9691500	LINE	Lx5	L1	chr4Lx59691236	NonProperStrand	1	1	-inf
chr5	143517204	143549319	protein_coding	Tnrc18	intron	ENSMUSG00000039477	ProperStrand	39	chr7	116663660	116663759	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	15	-20.5721
chr3	89750156	89750356	protein_coding	Atp8b2	exon	ENSMUSG00000060671	ProperStrand	140	chr6	92828412	92828429	protein_coding	Gm15737	intron	ENSMUSG00000079462	ProperStrand	11	1	-15.0661
chr10	89505500	89505554	protein_coding	Anks1b	intron	ENSMUSG00000058589	ProperStrand	68	chr4	131908235	131908276	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-3.8074
chr5	119178162	119178289	protein_coding	Med13l	exon	ENSMUSG00000018076	ProperStrand	226	chr1	136710572	136710589	protein_coding	Ppp1r12b	intron	ENSMUSG00000073557	ProperStrand	21	8	-19.7083
chr11	98939782	98939882	protein_coding	Tns4	exon	ENSMUSG00000017607	ProperStrand	2	chr18	35716816	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-9.2832
chr17	23952266	23956995	protein_coding	Srrm2	utr3	ENSMUSG00000039218	ProperStrand	521	chr7	117189932	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-0.7446
chr2	120872244	120872260	protein_coding	Tgm5	exon	ENSMUSG00000053675	NonProperStrand	163	chr12	110918156	110918218	snoRNA	ENSMUSG00000065749_AF357428	.	ENSMUSG00000065749	ProperStrand	218	1	-8.7242
chr4	115243472	115243576	protein_coding	Cyp4a31	exon	ENSMUSG00000028712	ProperStrand	61	chr1	162968441	162968465	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-6.0465
chr10	80413550	80413566	protein_coding	Gng7	utr3	ENSMUSG00000048240	ProperStrand	21	chr7	29136525	29136575	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.2792
chr6	115757996	115758096	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr8	113366285	113366326	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	1	-1.7495
chr6	147258075	147258094	LINE	Lx8	L1	chr6Lx8147257577	NonProperStrand	1	chr14	76247724	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-inf
chr5	35930375	35930699	lincRNA	4931431C16Rik	exon	ENSMUSG00000055061	ProperStrand	28	chr3	85944541	85944609	snoRNA	ENSMUSG00000064390_Rnu73b	.	ENSMUSG00000064390	ProperStrand	164	1	-12.8369
chr11	96686839	96686867	protein_coding	Nfe2l1	intron	ENSMUSG00000038615	ProperStrand	118	chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	1	-8.1359
chr14	68373704	68373794	protein_coding	Dock5	utr3	ENSMUSG00000044447	ProperStrand	12	chr16	23111728	23111808	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-8.1126
chr5	90727691	90729092	protein_coding	Ankrd17	exon	ENSMUSG00000055204	ProperStrand	77	chr1	24620833	24620851	protein_coding	Gm10925	utr3	ENSMUSG00000090378	ProperStrand	320	1	-9.4581
chr5	125316615	125316632	protein_coding	Ccdc92	exon	ENSMUSG00000037979	ProperStrand	45	chr4	131865855	131865978	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-3.9969
chr18	10052128	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr5	74489202	74489293	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	2	-2.9298
chr2	94182952	94198921	protein_coding	Ttc17	exon	ENSMUSG00000027194	ProperStrand	13	chr6	83111671	83111687	protein_coding	1700003E16Rik	exon	ENSMUSG00000030030	ProperStrand	352	1	-12.8849
chr14	64149036	64149136	protein_coding	Mtmr9	exon	ENSMUSG00000035078	NonProperStrand	1	chrX	34622906	34622993	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	NonProperStrand	26	1	-inf
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	135846171	135846187	protein_coding	Zfp46	exon	ENSMUSG00000051351	NonProperStrand	85	1	-3.8052
chr4	63211297	63211314	protein_coding	Atp6v1g1	utr3	ENSMUSG00000039105	NonProperStrand	24	chr16	23111376	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-7.1804
chr9	70395961	70396051	protein_coding	Sltm	intron	ENSMUSG00000032212	ProperStrand	13	chr9	67192644	67192724	protein_coding	Tln2	intron	ENSMUSG00000052698	ProperStrand	79	1	-15.8795
chr2	32019138	32019208	protein_coding	Prrc2b	intron	ENSMUSG00000039262	ProperStrand	344	chr3	157729963	157729979	protein_coding	Lrrc40	utr3	ENSMUSG00000063052	ProperStrand	147	1	-8.0226
chr17	66216925	66217005	protein_coding	Ralbp1	exon	ENSMUSG00000024096	ProperStrand	39	chr15	98350186	98350276	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-5.5993
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chrX	83132125	83132143	protein_coding	5430427O19Rik	intron	ENSMUSG00000025058	NonProperStrand	7	1	-13.1405
chr12	88778631	88778722	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	chr15	79908929	79909013	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	4	-1.7754
chr4	128626164	128626896	protein_coding	Adc	exon	ENSMUSG00000028789	ProperStrand	10	chr7	116664870	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-5.9693
chr15	5067690	5068570	protein_coding	Rpl37	exon	ENSMUSG00000041841	ProperStrand	69	chr10	23505190	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-6.5038
chr2	32258095	32258202	protein_coding	Ptges2	utr3	ENSMUSG00000026820	ProperStrand	3	chr9	40612879	40612920	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	1	-15.8961
chr18	74748962	74748983	protein_coding	Myo5b	intron	ENSMUSG00000025885	ProperStrand	28	chr7	117189944	117190034	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.7726
chr5	36814544	36814644	protein_coding	Grpel1	utr3	ENSMUSG00000029198	ProperStrand	20	chr2	26494708	26494759	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.1919
chr14	49693428	49693479	protein_coding	Mudeng	exon	ENSMUSG00000036291	ProperStrand	4	chrX	34622906	34622974	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-8.6589
chr9	15130707	15130793	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	chr1	72272872	72272935	snRNA	ENSMUSG00000075752_U2	.	ENSMUSG00000075752	ProperStrand	535	5	-19.9729
chr8	32276601	32276851	protein_coding	Mak16	exon	ENSMUSG00000031578	ProperStrand	26	chr19	8800368	8800448	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-5.1258
chr4	130274698	130274788	protein_coding-noncoding	Pum1	utr5	ENSMUSG00000028580	NonProperStrand	1	chr4	130275316	130275396	protein_coding	Pum1	intron	ENSMUSG00000028580	NonProperStrand	5	1	-inf
chr6	70794802	70794820	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chr3	157729963	157729979	protein_coding	Lrrc40	utr3	ENSMUSG00000063052	ProperStrand	147	1	-9.6241
chr1	74350731	74350749	protein_coding	Pnkd	intron	ENSMUSG00000026179	ProperStrand	22	chr7	116663712	116663759	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.3535
chr2	179912205	179912282	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr7	140273495	140273528	protein_coding	Fgfr2	utr5	ENSMUSG00000030849	ProperStrand	100	4	-inf
chr7	25207412	25207516	protein_coding	1500002O20Rik	utr3	ENSMUSG00000002210	ProperStrand	7	chr9	120039636	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-7.5792
chr11	40531667	40531711	protein_coding	Hmmr	intron	ENSMUSG00000020330	ProperStrand	61	chr19	11015616	11015632	protein_coding	Gpr44	exon	ENSMUSG00000034117	NonProperStrand	118	1	-11.9221
chr4	134772038	134772069	protein_coding	Clic4	utr3	ENSMUSG00000037242	ProperStrand	84	chr8	32260335	32260414	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	3	-9.7132
chr2	152529754	152529770	protein_coding	H13	exon	ENSMUSG00000019188	NonProperStrand	16	chr9	48840423	48843699	protein_coding	Usp28	exon	ENSMUSG00000032267	ProperStrand	63	1	-15.8991
chr1	75484537	75484553	protein_coding	Obsl1	exon	ENSMUSG00000026211	NonProperStrand	192	chr2	144087349	144087447	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-4.2875
chr14	13654237	13654254	protein_coding	Cadps	intron	ENSMUSG00000054423	NonProperStrand	28	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-7.3584
chr5	109502205	109502295	LINE	L1Md_T	L1	chr5L1Md_T109502097	ProperStrand	1	chr7	54441784	54441864	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-inf
chr17	47928467	47928485	protein_coding	Tfeb	exon	ENSMUSG00000023990	ProperStrand	78	chr18	33954815	33954922	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-3.0294
chr1	39426869	39426896	protein_coding	Rpl31	exon	ENSMUSG00000073702	ProperStrand	41	chr11	62418017	62418038	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-6.3075
chr7	133641058	133641148	protein_coding	Atxn2l	exon	ENSMUSG00000032637	ProperStrand	219	chr11	116938556	116938636	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	5	-15.3033
chr11	115560523	115560613	protein_coding	Grb2	utr5	ENSMUSG00000059923	ProperStrand	12	chr2	26494706	26494798	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-10.2021
chr7	5062341	5062360	protein_coding	Rfpl4	exon	ENSMUSG00000035191	NonProperStrand	27	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.1875
chr15	89190105	89190135	protein_coding	Ncaph2	intron	ENSMUSG00000008690	ProperStrand	65	chr6	37910780	37910797	protein_coding	Trim24	exon	ENSMUSG00000029833	NonProperStrand	3	1	-inf
chr19	10696841	10696896	protein_coding	Ddb1	exon	ENSMUSG00000024740	ProperStrand	304	chr16	23111385	23111475	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	5	-0.8135
chr4	122678250	122678350	protein_coding	Mycl1	utr3	ENSMUSG00000028654	ProperStrand	6	chr7	116663748	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-7.0045
chr3	145241084	145241229	protein_coding	Znhit6	exon	ENSMUSG00000074182	ProperStrand	12	chr19	8798490	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-8.4427
chr9	14538701	14538791	protein_coding	Piwil4	intron	ENSMUSG00000036912	ProperStrand	24	chr4	131908358	131908438	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.9196
chr14	51427145	51427245	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr11	62417002	62417021	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-0.8065
chr16	90066073	90066173	protein_coding	Tiam1	intron	ENSMUSG00000002489	ProperStrand	80	chr4	43013250	43013283	protein_coding	Vcp	utr5	ENSMUSG00000028452	ProperStrand	108	1	-11.5543
chr1	43990985	43991029	protein_coding	Tpp2	exon	ENSMUSG00000041763	ProperStrand	22	chr15	5068442	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	2	-12.9294
chr1	42955423	42956355	protein_coding	Mrps9	exon	ENSMUSG00000060679	ProperStrand	26	chr7	148634792	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	4	-17.4076
chr11	87240282	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	chr16	23111394	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	16	-16.5099
chr15	89304180	89304460	protein_coding	Arsa	exon	ENSMUSG00000022620	ProperStrand	5	chr14	52829474	52829564	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-13.3635
chr8	58911500	58911580	LINE	Lx9	L1	chr8Lx958911398	ProperStrand	1	chr8	58911135	58911225	LTR	MTD	MaLR	chr8MTD58911041	ProperStrand	1	1	-inf
chr1	164622591	164635851	protein_coding	Prrc2c	exon	ENSMUSG00000040225	ProperStrand	413	chr10	110918578	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	12	-16.0493
chr12	8305503	8305519	protein_coding	Gdf7	exon	ENSMUSG00000037660	NonProperStrand	1	chr4	126861683	126861700	protein_coding	Dlgap3	intron	ENSMUSG00000042388	ProperStrand	12	1	-inf
chr17	75790277	75790293	protein_coding	Ltbp1	utr3	ENSMUSG00000001870	NonProperStrand	66	chr3	87905386	87905404	protein_coding	Iqgap3	exon	ENSMUSG00000028068	ProperStrand	16	1	-15.8013
chr5	128076288	128076304	protein_coding	Slc15a4	utr3	ENSMUSG00000029416	ProperStrand	49	chr8	26827320	26827337	protein_coding	Whsc1l1	utr3	ENSMUSG00000054823	NonProperStrand	17	1	-16.3372
chr10	80809668	80809684	protein_coding	Hmg20b	exon	ENSMUSG00000020232	ProperStrand	157	chr7	108440949	108440967	protein_coding	Atg16l2	intron	ENSMUSG00000047767	ProperStrand	121	1	-9.9750
chr3	41364944	41365010	protein_coding	Phf17	intron	ENSMUSG00000025764	ProperStrand	101	chr13	22003217	22003259	tRNA	tRNA84-AspGTC	.	469310	ProperStrand	10	3	-inf
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr2	162908385	162908431	protein_coding	Mybl2	exon	ENSMUSG00000017861	ProperStrand	230	1	-5.9421
chr17	35089181	35089204	processed_transcript	1110038B12Rik	.	ENSMUSG00000092203	ProperStrand	126	chr7	34994956	34994987	protein_coding-noncoding	Gpi1	utr3	ENSMUSG00000036427	ProperStrand	19	1	-14.1572
chr11	93986244	93986260	protein_coding	Spag9	utr3	ENSMUSG00000020859	NonProperStrand	8	chr9	51762761	51762782	protein_coding	Fdx1	intron	ENSMUSG00000032051	ProperStrand	8	1	-18.6452
chr8	13416897	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr9	54711578	54711672	protein_coding	Ireb2	utr5	ENSMUSG00000032293	ProperStrand	45	1	-7.0257
chr1	158579656	158579685	protein_coding	Abl2	utr3	ENSMUSG00000026596	ProperStrand	37	chr4	131908689	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.9439
chr16	72800514	72800532	protein_coding	Robo1	intron	ENSMUSG00000022883	NonProperStrand	188	chr18	35714233	35714262	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-1.5247
chr5	130717202	130717252	protein_coding	0610007L01Rik	utr3	ENSMUSG00000053094	ProperStrand	39	chr6	92828412	92828429	protein_coding	Gm15737	intron	ENSMUSG00000079462	ProperStrand	11	1	-17.4666
chr19	55366339	55368089	protein_coding	Acsl5	exon	ENSMUSG00000024981	ProperStrand	7	chr17	13112450	13112530	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	2	-14.3870
chr14	61398407	61398423	protein_coding	C1qtnf9	exon	ENSMUSG00000071347	ProperStrand	187	chr19	8798740	8798759	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-2.7023
chr7	112533562	112533579	protein_coding	Fam160a2	exon	ENSMUSG00000044465	ProperStrand	85	chr3	123210856	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	4	-6.2664
chr5	136614841	136615335	protein_coding	Alkbh4	utr5	ENSMUSG00000039754	ProperStrand	40	chr11	6428103	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.9420
chr4	43505802	43505864	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr4	118951656	118951756	protein_coding	Ybx1	exon	ENSMUSG00000028639	ProperStrand	171	2	-2.5836
chr5	148113281	148113297	protein_coding	Cdx2	utr3	ENSMUSG00000029646	ProperStrand	276	chr5	121655016	121655039	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-1.2174
chr12	119320943	119320960	protein_coding	Dnahc11	exon	ENSMUSG00000018581	ProperStrand	65	chr10	80640876	80640895	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-5.9414
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chrX	11635848	11635865	protein_coding	Bcor	exon	ENSMUSG00000040363	NonProperStrand	293	3	-4.7682
chr3	107819849	107820302	protein_coding	Gstm1	exon	ENSMUSG00000058135	ProperStrand	27	chr16	23111464	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-6.7205
chr5	136410311	136410401	protein_coding	Ywhag	utr5	ENSMUSG00000051391	ProperStrand	142	chr16	23111696	23111776	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-1.5142
chr4	151448540	151448559	protein_coding	Plekhg5	intron	ENSMUSG00000039713	NonProperStrand	2	chr17	35089182	35089229	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-12.9029
chr2	156663220	156663310	antisense	Gm14230	.	ENSMUSG00000087179	ProperStrand	4	chr4	55025794	55025874	protein_coding	Zfp462	exon	ENSMUSG00000060206	ProperStrand	37	1	-18.9447
chr12	120764070	120764087	LTR	RLTR31_Mm	ERVK	chr12RLTR31_Mm120763946	ProperStrand	1	chr15	76005537	76005553	protein_coding	Plec	exon	ENSMUSG00000022565	ProperStrand	186	1	-inf
chr7	147130518	147130584	protein_coding	Utf1	exon	ENSMUSG00000047751	ProperStrand	67	chr12	88778648	88778738	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-6.2796
chr13	46765144	46765160	protein_coding	C78339	exon	ENSMUSG00000069237	NonProperStrand	104	chr9	64023228	64023289	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	1	-7.3482
chr11	70210351	70210400	protein_coding	Pelp1	exon	ENSMUSG00000018921	ProperStrand	64	chr10	85092005	85092021	protein_coding	Btbd11	exon	ENSMUSG00000020042	ProperStrand	13	1	-16.2795
chr17	24665484	24665504	antisense	2610019E17Rik	.	ENSMUSG00000093565	ProperStrand	24	chr11	49698493	49698568	protein_coding	Mapk9	utr3	ENSMUSG00000020366	ProperStrand	20	1	-17.2403
chr4	53873576	53873606	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	chr11	106362588	106362637	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-3.2989
chr9	115904612	115904702	protein_coding	Gadl1	intron	ENSMUSG00000056880	ProperStrand	2	chr10	63169262	63169342	protein_coding	Ctnna3	intron	ENSMUSG00000060843	ProperStrand	66	1	-inf
chr6	47738068	47738125	misc_RNA	Y_RNA	.	ENSMUSG00000065701	ProperStrand	129	chr14	15572352	15572370	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	1	-9.7474
chr6	116171877	116171910	protein_coding	D6Wsu116e	exon	ENSMUSG00000024104	ProperStrand	21	chr11	5849980	5849996	protein_coding	Gck	utr5	ENSMUSG00000041798	ProperStrand	2	1	-inf
chr2	121949511	121949527	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	chr2	31924012	31924028	protein_coding	Fam78a	utr3	ENSMUSG00000050592	NonProperStrand	340	1	-6.8409
chr19	8799583	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	chr15	79908926	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	3	-1.3853
chrX	103398212	103398615	protein_coding	Pgk1	exon	ENSMUSG00000062070	ProperStrand	484	chr4	116828379	116828441	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-4.2934
chrX	20250007	20250050	protein_coding	Uba1	exon	ENSMUSG00000001924	ProperStrand	156	chr7	30009205	30009221	protein_coding	Kcnk6	utr3	ENSMUSG00000046410	ProperStrand	3	1	-17.9111
chr19	8783546	8783631	protein_coding	Slc3a2	exon	ENSMUSG00000010095	ProperStrand	63	chr7	133839479	133839579	protein_coding	Bola2	utr5	ENSMUSG00000047721	ProperStrand	3	2	-inf
chr11	72503524	72573471	protein_coding	Ankfy1	exon	ENSMUSG00000020790	ProperStrand	68	chr16	23110911	23111001	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-1.1862
chr14	30802863	30802900	protein_coding	Actr8	exon	ENSMUSG00000015971	ProperStrand	7	chr4	131865891	131865965	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-14.0342
chr5	104093643	104093733	SINE	B2_Mm2	B2	chr5B2_Mm2104093521	NonProperStrand	1	chr5	104093916	104094006	SINE	B3A	B2	chr5B3A104093812	NonProperStrand	1	1	-inf
chr7	24779190	24779213	SINE	ID_B1	B4	chr7ID_B124779183	NonProperStrand	54	chr2	29014439	29014455	protein_coding	Setx	exon	ENSMUSG00000043535	ProperStrand	187	1	-11.2453
chr6	115755655	115758175	protein_coding	Rpl32	exon	ENSMUSG00000057841	ProperStrand	137	chr3	123210879	123210975	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	6	-7.4517
chr19	31157628	31157644	protein_coding	Cstf2t	exon	ENSMUSG00000053536	ProperStrand	48	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-8.1861
chr6	72793146	72793190	protein_coding	Kcmf1	intron	ENSMUSG00000055239	ProperStrand	26	chr3	79335590	79335635	protein_coding	Fnip2	intron	ENSMUSG00000061175	ProperStrand	45	3	-20.1698
chr14	15572351	15572371	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr16	23111770	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-1.2385
chr17	88085767	88088379	protein_coding	Msh2	exon	ENSMUSG00000024151	ProperStrand	124	chr10	80642381	80642448	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-4.6871
chr4	43505709	43505799	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr14	96917431	96917449	protein_coding	Klhl1	exon	ENSMUSG00000022076	ProperStrand	4	1	-8.5468
chr8	87372577	87372667	SINE	B4	B4	chr8B487372508	ProperStrand	1	chr8	87252630	87252710	protein_coding	Nfix	intron	ENSMUSG00000001911	ProperStrand	12	1	-inf
chr6	6136684	6136718	protein_coding	Slc25a13	intron	ENSMUSG00000015112	ProperStrand	78	chr4	134926614	134927796	protein_coding	A330049M08Rik	exon	ENSMUSG00000043924	ProperStrand	130	1	-11.2335
chr2	25105896	25107254	protein_coding	Ndor1	exon	ENSMUSG00000006471	NonProperStrand	84	chr1	191058375	191058393	protein_coding	Kcnk2	intron	ENSMUSG00000037624	ProperStrand	56	1	-12.7781
chr15	73937277	73937293	LTR	MER31A	ERV1	chr15MER31A73937233	NonProperStrand	18	chrX	98791519	98791539	protein_coding	Taf1	exon	ENSMUSG00000031314	ProperStrand	61	1	-15.6842
chr12	111929759	111930939	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr4	131908689	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	15	-1.2611
chr18	35716788	35716831	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	chr7	19886635	19886679	tRNA	tRNA86-SeCTCA	.	1010704	ProperStrand	34	2	-5.4512
chr2	48296641	48296659	lincRNA	Gm13481	intron	ENSMUSG00000086353	ProperStrand	9	chr1	71676393	71676412	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	1	-11.7119
chr1	134004263	134004353	LTR	MTE2a-int	MaLR	chr1MTE2a-int134003901	NonProperStrand	3	chr1	134004402	134004482	LTR	RLTR25A	ERVK	chr1RLTR25A134004352	NonProperStrand	3	3	-inf
chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	chr8	108660339	108660365	protein_coding	Esrp2	exon	ENSMUSG00000084128	ProperStrand	6	1	-13.2610
chr19	46080183	46080199	protein_coding	Hps6	exon	ENSMUSG00000074811	NonProperStrand	45	chr2	22444556	22444600	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-8.3526
chr13	14120002	14121550	protein_coding	Tbce	exon	ENSMUSG00000039233	ProperStrand	6	chr7	118219575	118219627	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-14.2970
chr7	134168986	134169028	protein_coding	Maz	utr5	ENSMUSG00000030678	ProperStrand	42	chr4	122970426	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-8.1283
chr16	35932620	35932636	protein_coding	Dtx3l	exon	ENSMUSG00000049502	ProperStrand	152	chr19	8799599	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-4.9472
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	41150096	41150136	snoRNA	ENSMUSG00000089265_SNORD121A	.	ENSMUSG00000089265	ProperStrand	370	2	-2.5378
chr16	32655255	32655309	protein_coding	Tnk2	intron	ENSMUSG00000022791	ProperStrand	86	chrX	34622906	34622940	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-2.5366
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr7	125258331	125258675	protein_coding	Rps15a	exon	ENSMUSG00000008683	ProperStrand	28	1	-6.4542
chr9	32064709	32064777	protein_coding	Arhgap32	exon	ENSMUSG00000041444	ProperStrand	37	chr9	15118332	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	4	-14.0619
chr11	117871825	117871915	protein_coding	Pgs1	intron	ENSMUSG00000017715	ProperStrand	25	chr17	24857748	24857828	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	4	-12.8608
chr17	36097663	36097764	protein_coding	Abcf1	exon	ENSMUSG00000038762	ProperStrand	206	chr1	63225577	63225638	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-4.2721
chr12	50485632	50485652	protein_coding	Foxg1	exon	ENSMUSG00000020950	NonProperStrand	26	chr12	80182329	80182349	protein_coding	Pigh	utr3	ENSMUSG00000021120	ProperStrand	13	1	-18.2502
chr2	130103751	130103813	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	chr7	116664809	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	9	-3.2512
chr13	51743565	51743662	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	chr7	52381719	52381763	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	3	-4.5860
chr6	92775695	92775785	protein_coding	Adamts9	intron	ENSMUSG00000030022	ProperStrand	27	chr18	33954828	33954908	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	3	-11.9347
chr6	114260511	114260527	protein_coding	Slc6a1	exon	ENSMUSG00000030310	NonProperStrand	147	chr4	41150112	41150158	snoRNA	ENSMUSG00000089265_SNORD121A	.	ENSMUSG00000089265	ProperStrand	370	1	-7.8779
chr16	18541955	18561761	protein_coding	Gnb1l	intron	ENSMUSG00000000884	ProperStrand	25	chr18	33954817	33954948	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	8	-19.3611
chr8	87497982	87498081	protein_coding	Prdx2	utr3	ENSMUSG00000005161	ProperStrand	20	chr7	80589207	80592043	protein_coding	Chd2	exon	ENSMUSG00000078671	ProperStrand	69	1	-15.2544
chr6	136757079	136757193	protein_coding	H2afj	exon	ENSMUSG00000060032	ProperStrand	25	chr9	15118562	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	1	-11.1116
chr4	24555744	24555764	protein_coding	Klhl32	intron	ENSMUSG00000040387	ProperStrand	67	chr17	39985323	39985413	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-5.7155
chr17	8375278	8375315	protein_coding	Fgfr1op	exon	ENSMUSG00000069135	ProperStrand	14	chr7	52381973	52382010	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-9.6541
chr7	147279321	147279337	protein_coding	Prap1	utr5	ENSMUSG00000025467	NonProperStrand	1	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-inf
chr11	113423607	113423624	protein_coding	Slc39a11	intron	ENSMUSG00000041654	NonProperStrand	39	chr9	120039545	120039639	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-4.1210
chr5	137508538	137508555	protein_coding	Vgf	exon	ENSMUSG00000037428	NonProperStrand	13	chr3	85942725	85942768	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	1	-12.8350
chr17	29627374	29627392	lincRNA	Gm16912	intron	ENSMUSG00000087551	ProperStrand	3	chr11	98878372	98878456	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-12.6246
chr11	23186866	23186916	protein_coding	Xpo1	exon	ENSMUSG00000020290	ProperStrand	123	chr7	148634702	148634792	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-2.6835
chr10	118639917	118639982	protein_coding	Cand1	utr3	ENSMUSG00000020114	ProperStrand	76	chr15	98350146	98350186	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	2	-7.1914
chr12	101563863	101563889	protein_coding	Ttc7b	exon	ENSMUSG00000033530	ProperStrand	49	chr4	131865856	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.0906
chr9	120037898	120037991	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	chr19	8800085	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	11	-11.4588
chrX	72351080	72351628	protein_coding	Dkc1	exon	ENSMUSG00000031403	ProperStrand	89	chr3	123210854	123210890	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.4585
chr2	3244300	3244390	protein_coding	Nmt2	utr3	ENSMUSG00000026643	ProperStrand	21	chr17	24857749	24857829	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.2024
chr5	125202783	125202837	protein_coding	Atp6v0a2	utr3	ENSMUSG00000038023	ProperStrand	31	chr2	130101991	130102081	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	5	-18.8519
chr15	10505434	10505524	protein_coding	Rai14	exon	ENSMUSG00000022246	ProperStrand	180	chr14	76247731	76247811	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	16	-20.5748
chr9	123065930	123065946	protein_coding	Clec3b	exon	ENSMUSG00000025784	ProperStrand	58	chr8	108415187	108415264	protein_coding	Edc4	exon	ENSMUSG00000036270	ProperStrand	34	1	-14.5262
chr7	130363535	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	chr12	82317769	82317785	protein_coding	Slc8a3	exon	ENSMUSG00000079055	ProperStrand	126	1	-11.0765
chr9	103103649	103103685	protein_coding	Gm20425	exon	ENSMUSG00000090639	ProperStrand	22	chr4	122968660	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	3	-18.6043
chr2	90235297	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	66305355	66306011	protein_coding	Herc1	exon	ENSMUSG00000038664	ProperStrand	81	1	-3.8951
chr10	127751069	127751085	protein_coding	Pan2	exon	ENSMUSG00000005682	ProperStrand	53	chr4	131865867	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.9636
chr7	128790483	128790510	protein_coding	Usp31	utr3	ENSMUSG00000063317	ProperStrand	35	chr9	120038615	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-6.7965
chr11	69756091	69756107	protein_coding	Slc2a4	utr3	ENSMUSG00000018566	ProperStrand	7	chr14	76247741	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	4	-19.8392
chr10	121246910	121247018	protein_coding	Srgap1	intron	ENSMUSG00000020121	ProperStrand	33	chr11	68887026	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-5.2969
chr8	34796106	34796162	protein_coding	Gsr	exon	ENSMUSG00000031584	ProperStrand	18	chr16	23111741	23111775	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-6.8529
chr15	12273082	12273182	protein_coding	Golph3	intron	ENSMUSG00000022200	ProperStrand	35	chr4	122970455	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-8.4951
chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	chr11	106362639	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-1.5658
chr18	89191834	89191873	protein_coding	Rttn	intron	ENSMUSG00000023066	ProperStrand	19	chr17	24857802	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-7.3862
chr5	135097507	135097889	protein_coding	Eif4h	exon	ENSMUSG00000040731	ProperStrand	46	chr17	13115738	13115786	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	3	-17.9265
chr17	23955820	23955839	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	chr8	73419654	73419731	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-1.6032
chr10	127997720	127997776	protein_coding	Pa2g4	exon	ENSMUSG00000025364	ProperStrand	72	chr8	126361213	126361303	protein_coding	Gm20388	intron	ENSMUSG00000092329	ProperStrand	295	1	-9.7552
chr13	28843546	28843562	lincRNA	2610307P16Rik	intron	ENSMUSG00000085936	ProperStrand	154	chr10	127875856	127875917	protein_coding	Rnf41	utr3	ENSMUSG00000025373	ProperStrand	20	1	-13.6497
chr12	112565198	112565215	protein_coding	Cdc42bpb	intron	ENSMUSG00000021279	ProperStrand	128	chr11	6428142	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.8999
chr4	40895661	40895697	protein_coding	Chmp5	exon	ENSMUSG00000028419	ProperStrand	14	chr9	7933203	7933254	protein_coding	Yap1	utr3	ENSMUSG00000053110	ProperStrand	68	3	-21.3394
chr4	134082348	134082413	protein_coding	Fam54b	exon	ENSMUSG00000046671	ProperStrand	10	chr12	17552972	17553029	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	4	-20.5395
chr15	98688544	98688634	protein_coding	Mll2	exon	ENSMUSG00000048154	ProperStrand	170	chr7	116664811	116664891	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-0.9772
chr12	17552949	17553071	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr19	8800355	8800483	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	20	-1.7443
chr9	13560087	13595860	protein_coding	Mtmr2	intron	ENSMUSG00000031918	ProperStrand	22	chr18	35716811	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-6.7225
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr7	116663633	116663768	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	12	-1.6155
mmu-miR-1949	9	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr2	6362525	6362632	protein_coding	Usp6nl	exon	ENSMUSG00000039046	ProperStrand	59	4	-19.1434
chr15	79736292	79736346	protein_coding	Apobec3	intron	ENSMUSG00000009585	NonProperStrand	4	chr16	23111449	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-10.7545
chr14	71022980	71023070	protein_coding	Epb4.9	intron	ENSMUSG00000022099	ProperStrand	48	chr19	8963084	8963164	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.6557
chr4	132740993	132741010	protein_coding	Wasf2	exon	ENSMUSG00000028868	ProperStrand	56	chr3	123210876	123210966	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-3.9092
chr11	116016097	116016113	protein_coding	Fbf1	exon	ENSMUSG00000020776	NonProperStrand	36	chr11	43373471	43373508	protein_coding	Ccnjl	intron	ENSMUSG00000044707	ProperStrand	13	1	-17.3835
chr14	56491542	56491558	protein_coding	Nynrin	exon	ENSMUSG00000075592	ProperStrand	76	chr11	6428108	6428156	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.7712
chr12	3965716	3965748	protein_coding	Efr3b	utr3	ENSMUSG00000020658	ProperStrand	142	chr10	23505152	23505255	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-0.7602
chr17	4082654	4082783	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr7	16534823	16534839	protein_coding	Ehd2	utr3	ENSMUSG00000074364	NonProperStrand	197	1	-7.5906
mmu-miR-2137	0	17	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	chr12	77200288	77200304	protein_coding	Syne2	exon	ENSMUSG00000063450	ProperStrand	63	1	-11.4582
chr7	52378551	52378583	protein_coding	Rps11	exon	ENSMUSG00000003429	ProperStrand	49	chr1	162965534	162965602	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-6.1940
chr2	144091737	144091827	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	ProperStrand	549	chr3	108357448	108357527	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-0.8815
chrX	96245892	96245908	protein_coding	Stard8	intron	ENSMUSG00000031216	ProperStrand	142	chr11	69483217	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.1323
chr8	74892618	74895621	protein_coding	Eps15l1	exon	ENSMUSG00000006276	ProperStrand	42	chr11	68886944	68887024	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-4.8268
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr10	110918549	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	4	-0.8030
chr1	40053934	40053951	protein_coding	Map4k4	exon	ENSMUSG00000026074	ProperStrand	348	chr17	35089182	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-2.2503
chr11	88921937	88921998	protein_coding	Dgke	utr5	ENSMUSG00000000276	ProperStrand	8	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	2	-17.7033
chr19	43462740	43462757	protein_coding	Hpse2	exon	ENSMUSG00000074852	ProperStrand	8	chr9	120038607	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-6.9869
chr10	127152705	127152721	protein_coding	Myo1a	exon	ENSMUSG00000025401	ProperStrand	93	chr4	131866608	131866674	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	1	-8.2280
chr1	102076757	102076793	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	chr5	130295531	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-1.7694
chr4	107042108	107042156	protein_coding	Tmem48	intron	ENSMUSG00000028614	ProperStrand	42	chr4	132530099	132530117	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	2	-16.2807
chr4	43505792	43505882	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr6	52589233	52589293	snoRNA	ENSMUSG00000064792_SNORA32	.	ENSMUSG00000064792	ProperStrand	151	1	-1.5436
chr4	116862546	116862636	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	chr1	162965531	162965588	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	5	-2.6710
chr9	43920963	43920979	protein_coding	Rnf26	exon	ENSMUSG00000053128	ProperStrand	30	chr5	130300471	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-6.3836
chr2	30291088	30291153	protein_coding	Ppp2r4	exon	ENSMUSG00000039515	ProperStrand	76	chr9	120038576	120038666	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.6228
chr17	56848652	56848711	protein_coding	Ranbp3	exon	ENSMUSG00000002372	ProperStrand	34	chr7	118219574	118219614	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-5.2657
chr9	95367019	95372495	protein_coding	2610101N10Rik	exon	ENSMUSG00000032407	ProperStrand	56	chr7	29136534	29136614	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.4821
chr12	114359283	114361329	protein_coding	Mta1	exon	ENSMUSG00000021144	ProperStrand	74	chr17	35966805	35966845	protein_coding	Flot1	exon	ENSMUSG00000059714	ProperStrand	8	1	-16.9853
chr2	69293589	69294897	protein_coding	Lrp2	exon	ENSMUSG00000027070	ProperStrand	35	chr8	75190693	75190709	protein_coding	Nwd1	exon	ENSMUSG00000048148	ProperStrand	46	1	-14.9451
chr12	92236997	92237079	protein_coding	4930534B04Rik	utr3	ENSMUSG00000061533	ProperStrand	14	chr19	8799830	8799849	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-7.8511
chr5	46084445	46084485	protein_coding	Ncapg	exon	ENSMUSG00000015880	ProperStrand	36	chr19	8963092	8963182	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.1678
chr11	40527547	40527623	protein_coding	Hmmr	exon	ENSMUSG00000020330	ProperStrand	61	chr4	135327523	135329683	protein_coding	Myom3	exon	ENSMUSG00000037139	NonProperStrand	62	1	-13.2148
chrX	147749444	147749461	antisense	Gm15139	.	ENSMUSG00000084771	ProperStrand	11	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.5623
chr11	67005924	67005940	protein_coding	Myh2	exon	ENSMUSG00000033196	ProperStrand	66	chr4	131908753	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.0969
chr6	83556246	83556336	LINE	Lx7	L1	chr6Lx783556218	ProperStrand	1	chr8	32260359	32260439	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-inf
chr1	15823555	15828265	protein_coding	Terf1	exon	ENSMUSG00000025925	ProperStrand	19	chr10	23505152	23505258	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.1073
chr19	8799357	8799402	snoRNA	ENSMUSG00000065280_SNORD28	.	ENSMUSG00000065280	ProperStrand	269	chr2	130101266	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	4	-12.1402
chr9	109988798	109989102	protein_coding	Dhx30	exon	ENSMUSG00000032480	ProperStrand	29	chr16	23111772	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.1494
chr2	29927608	29927708	protein_coding	Set	utr3	ENSMUSG00000054766	ProperStrand	167	chr7	118219574	118219609	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-2.3297
chr2	33267808	33267864	protein_coding	Zbtb34	exon	ENSMUSG00000068966	ProperStrand	9	chr16	23111416	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-15.4271
mmu-miR-6239	0	18	miRNA	mmu-miR-6239	.	mmu-miR-6239	ProperStrand	31	chr7	148634702	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	3	-12.3828
chr2	37206166	37214686	protein_coding	Pdcl	utr3	ENSMUSG00000009030	ProperStrand	32	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-4.6769
chr1	71649051	71650236	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr10	94785242	94785258	protein_coding	Cradd	exon	ENSMUSG00000045867	ProperStrand	25	1	-9.5969
chr12	102278912	102280057	protein_coding	Smek1	exon	ENSMUSG00000041846	ProperStrand	66	chr16	23111451	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-3.5420
chr2	113647867	113647883	protein_coding	Scg5	intron	ENSMUSG00000023236	ProperStrand	3	chr2	26493366	26493435	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-9.9740
chr10	79316213	79316230	lincRNA	E130317F20Rik	exon	ENSMUSG00000091994	NonProperStrand	97	chr8	86095699	86095799	protein_coding	Tecr	utr3	ENSMUSG00000031708	ProperStrand	100	7	-inf
chr17	36000485	36000501	protein_coding	Nrm	exon	ENSMUSG00000059791	ProperStrand	253	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-0.9961
chr8	74066873	74066953	protein_coding	Fam125a	exon	ENSMUSG00000031813	ProperStrand	14	chr10	23505152	23505231	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.6795
chr16	17844171	17844261	protein_coding	Dgcr2	exon	ENSMUSG00000003166	ProperStrand	45	chr11	69483198	69483278	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.9519
chr17	39979943	39979997	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	NonProperStrand	5	chr12	70260512	70260584	misc_RNA	AC099934.1	.	ENSMUSG00000092665	NonProperStrand	1	1	-inf
chr5	31506462	31506507	protein_coding	Ppm1g	exon	ENSMUSG00000029147	ProperStrand	69	chr4	131908810	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	6	-8.2956
chr5	74489202	74489300	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr2	158182156	158182270	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	13	-5.9207
chr3	144748059	144749264	protein_coding	Clca5	exon	ENSMUSG00000036960	ProperStrand	86	chr4	131908356	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.9394
chr7	67129997	67130754	protein_coding	Snrpn	exon	ENSMUSG00000000948	ProperStrand	32	chr19	44188391	44188471	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	1	-9.0582
chr11	4671484	4671506	protein_coding	Nf2	intron	ENSMUSG00000009073	ProperStrand	72	chr2	26493392	26493478	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-3.4060
chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	chr3	103766705	103766721	protein_coding	Rsbn1	utr3	ENSMUSG00000044098	NonProperStrand	17	1	-10.6636
chr2	180445442	180453286	protein_coding	2310003C23Rik	intron	ENSMUSG00000027573	ProperStrand	25	chr16	23110913	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-5.7718
chr13	113689044	113691726	protein_coding	Skiv2l2	exon	ENSMUSG00000016018	ProperStrand	55	chr1	95327895	95327916	protein_coding	Hdlbp	exon	ENSMUSG00000034088	ProperStrand	97	4	-20.7278
chr4	151680268	151680293	protein_coding	Icmt	utr3	ENSMUSG00000039662	ProperStrand	48	chr4	131908236	131908319	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.7522
chr11	116460071	116460151	protein_coding	Rhbdf2	utr3	ENSMUSG00000020806	ProperStrand	20	chr19	8963083	8963173	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.2716
chr2	32163126	32163198	protein_coding	Golga2	utr3	ENSMUSG00000002546	ProperStrand	10	chr8	129468789	129468879	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-7.9945
chr3	137628915	137644330	protein_coding	Dapp1	exon	ENSMUSG00000028159	ProperStrand	4	chr10	23505152	23505177	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-6.2798
chr17	39985196	39985295	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr18	75161536	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	3	-2.5331
chr4	126541011	126541101	protein_coding	Zmym4	utr3	ENSMUSG00000042446	ProperStrand	94	chr5	74489596	74489676	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-2.9597
chr5	115940316	115940406	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	chr19	8800355	8800466	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-0.7207
chr17	36000701	36000730	protein_coding	Nrm	intron	ENSMUSG00000059791	ProperStrand	253	chr14	76247711	76247752	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-1.6679
chr6	86599073	86599089	protein_coding	Mxd1	utr3	ENSMUSG00000001156	NonProperStrand	40	chr12	31972876	31973070	protein_coding	Lamb1	exon	ENSMUSG00000002900	ProperStrand	87	1	-13.3847
chr2	131148492	131148513	protein_coding	Rnf24	intron	ENSMUSG00000048911	ProperStrand	11	chr7	29136525	29136645	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.5623
chr9	21579186	21580224	protein_coding	Kank2	exon	ENSMUSG00000032194	ProperStrand	196	chr11	97643001	97643080	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-0.7581
chr9	78023193	78023216	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr15	80843932	80844032	protein_coding	Mkl1	exon	ENSMUSG00000042292	ProperStrand	57	1	-5.9787
chr1	89673604	89673718	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	chr15	71624617	71624798	snoRNA	ENSMUSG00000088895_SNORA81	.	ENSMUSG00000088895	ProperStrand	348	12	-16.7686
chr17	35972716	35972740	protein_coding	Tubb5	exon	ENSMUSG00000001525	ProperStrand	624	chr8	86782815	86784198	protein_coding	Ccdc130	exon	ENSMUSG00000004994	ProperStrand	29	1	-10.0937
chr13	110123293	110123382	protein_coding	Pde4d	intron	ENSMUSG00000021699	ProperStrand	92	chr7	29136525	29136595	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.6774
chr2	90235304	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	55363030	55363046	protein_coding	Rad23b	utr5	ENSMUSG00000028426	ProperStrand	86	1	-3.7834
chr4	131866155	131866256	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	chr2	91436228	91436337	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	4	-0.7432
chr5	25198102	25198120	protein_coding	Xrcc2	exon	ENSMUSG00000028933	ProperStrand	8	chr3	68889075	68889128	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-7.2271
chr15	84685469	84685488	protein_coding	Phf21b	utr5	ENSMUSG00000016624	NonProperStrand	6	chr17	25261590	25261606	protein_coding	Ptx4	exon	ENSMUSG00000044172	NonProperStrand	30	1	-18.9879
chr8	55772662	55772752	protein_coding	Wdr17	utr3	ENSMUSG00000039375	NonProperStrand	2	chr8	55780936	55781026	protein_coding	Wdr17	intron	ENSMUSG00000039375	ProperStrand	1	1	-inf
chr3	88387787	88390838	protein_coding	Ssr2	exon	ENSMUSG00000041355	ProperStrand	22	chr4	33276377	33276393	protein_coding	Pm20d2	utr5	ENSMUSG00000054659	ProperStrand	19	1	-17.5479
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr5	149163915	149164014	protein_coding	Slc7a1	utr5	ENSMUSG00000041313	ProperStrand	65	1	-8.4327
chr6	146715291	146715968	protein_coding	Stk38l	exon	ENSMUSG00000001630	ProperStrand	60	chr14	56300123	56300291	protein_coding	Tinf2	exon	ENSMUSG00000007589	ProperStrand	5	1	-18.2404
chr15	99542590	99542681	protein_coding	Smarcd1	exon	ENSMUSG00000023018	ProperStrand	43	chr8	113447147	113447169	protein_coding	St3gal2	intron	ENSMUSG00000031749	ProperStrand	206	1	-11.5116
chr10	79484887	79484923	protein_coding	Hmha1	exon	ENSMUSG00000035697	ProperStrand	8	chr5	122691914	122691930	protein_coding	Hvcn1	utr3	ENSMUSG00000064267	ProperStrand	182	1	-15.2205
chr9	44215799	44215827	protein_coding	Rps25	utr5	ENSMUSG00000009927	ProperStrand	42	chr10	90581034	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	3	-12.8425
chr11	50021351	50024088	protein_coding	Sqstm1	exon	ENSMUSG00000015837	ProperStrand	36	chr11	80486384	80486400	protein_coding	Myo1d	intron	ENSMUSG00000035441	NonProperStrand	24	1	-16.2098
chr11	79762415	79762431	protein_coding	Utp6	exon	ENSMUSG00000035575	ProperStrand	28	chr6	72309928	72309956	protein_coding	Rnf181	utr3	ENSMUSG00000055850	ProperStrand	12	1	-18.0050
chr17	56704784	56704803	protein_coding	Safb2	intron	ENSMUSG00000042625	NonProperStrand	2	chr3	108357449	108357484	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-11.9197
chr7	52309977	52309993	protein_coding	Prrg2	exon	ENSMUSG00000007837	NonProperStrand	281	chr10	80039568	80039585	protein_coding	Klf16	exon	ENSMUSG00000035397	NonProperStrand	2	1	-17.9970
chr12	111930647	111930903	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr15	82725599	82725635	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	4	-11.8832
chr8	40129349	40129470	protein_coding	Tusc3	intron	ENSMUSG00000039530	ProperStrand	15	chr16	18240811	18240843	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	3	-20.4595
chr19	33634083	33653898	protein_coding	Lipo1	exon	ENSMUSG00000024766	ProperStrand	8	chr3	79223176	79223193	protein_coding	Gm17359	intron	ENSMUSG00000091685	NonProperStrand	50	2	-18.7592
chr1	65208410	65208427	protein_coding	Idh1	exon	ENSMUSG00000025950	ProperStrand	17	chr15	91252735	91252751	protein_coding	Slc2a13	intron	ENSMUSG00000036298	ProperStrand	22	1	-18.1526
chr11	75565404	75565440	protein_coding	Ywhae	exon	ENSMUSG00000020849	ProperStrand	176	chr19	8800121	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-5.4858
chr1	164476310	164476377	protein_coding	Mettl13	exon	ENSMUSG00000026694	ProperStrand	26	chr11	77995189	77995238	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-7.8527
chr18	37911790	37911806	protein_coding	Pcdhga9	intron	ENSMUSG00000023036	ProperStrand	245	chr18	73693166	73693188	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-2.8845
chr17	24361191	24361291	protein_coding	Ccnf	exon	ENSMUSG00000072082	ProperStrand	149	chrX	34622906	34622957	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-1.6473
chr9	69327537	69330809	protein_coding	Anxa2	exon	ENSMUSG00000032231	ProperStrand	43	chr5	74489595	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-4.4078
chr3	37750806	37750824	LINE	L1_Mus3	L1	chr3L1_Mus337750762	ProperStrand	38	chr2	26493423	26493474	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-4.6088
chr6	115727278	115727386	protein_coding	Cand2	intron	ENSMUSG00000030319	ProperStrand	40	chr13	23673795	23673837	protein_coding	Hist1h4d	utr3	ENSMUSG00000061482	ProperStrand	57	2	-19.2403
chr11	59778161	59778177	protein_coding	Rasd1	exon	ENSMUSG00000049892	NonProperStrand	49	chr2	130103751	130103797	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-8.8779
chr11	97397970	97397987	protein_coding	Srcin1	intron	ENSMUSG00000038453	ProperStrand	29	chr16	23110828	23110915	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0921
chr11	80965641	80965658	protein_coding	Accn1	exon	ENSMUSG00000020704	NonProperStrand	228	chr7	54189362	54189415	protein_coding	Uevld	intron	ENSMUSG00000043262	ProperStrand	23	2	-19.4501
chr3	116298267	116298284	protein_coding	Sass6	intron	ENSMUSG00000027959	ProperStrand	10	chr1	102076758	102076790	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	1	-13.0997
chr19	25484358	25484374	protein_coding	Kank1	exon	ENSMUSG00000032702	ProperStrand	218	chr11	106362304	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	3	-8.4340
chr13	46788938	46788969	protein_coding	Nup153	exon	ENSMUSG00000021374	ProperStrand	69	chr19	8800443	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-3.2742
chr16	91839925	91839941	protein_coding	Atp5o	intron	ENSMUSG00000022956	ProperStrand	37	chr17	29175457	29177722	protein_coding	Srsf3	exon	ENSMUSG00000071172	NonProperStrand	2	1	-inf
chr12	112963132	112963200	protein_coding	2810002N01Rik	utr3	ENSMUSG00000037787	ProperStrand	3	chr10	90581034	90581054	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	3	-inf
chr19	47201838	47202516	protein_coding	Pdcd11	exon	ENSMUSG00000025047	ProperStrand	137	chr10	110918664	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-2.0169
chr16	62903329	62903429	protein_coding	Pros1	exon	ENSMUSG00000022912	ProperStrand	20	chr10	23505152	23505217	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.0137
chr8	96580283	96580335	protein_coding	Ogfod1	intron	ENSMUSG00000033009	ProperStrand	18	chr14	122846312	122846349	protein_coding	Gm5089	intron	ENSMUSG00000064052	ProperStrand	2	1	-inf
chr2	152708026	152709917	protein_coding	Tpx2	exon	ENSMUSG00000027469	ProperStrand	111	chr8	73419657	73419783	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	21	-inf
chr6	39037282	39037298	protein_coding	Parp12	utr3	ENSMUSG00000038507	ProperStrand	24	chr4	131908809	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.6746
chr6	78952427	78952445	LTR	MTD	MaLR	chr6MTD78952426	NonProperStrand	2	chr3	136526736	136526753	protein_coding	Ppp3ca	intron	ENSMUSG00000028161	NonProperStrand	120	1	-21.3189
chrX	72353610	72354104	protein_coding	Dkc1	utr3	ENSMUSG00000031403	ProperStrand	89	chr1	162967516	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-2.7662
chr10	94875367	94875457	protein_coding	Socs2	exon	ENSMUSG00000020027	ProperStrand	7	chr9	120037901	120037981	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	2	-14.5836
chr3	96330976	96330992	protein_coding	Hfe2	exon	ENSMUSG00000038403	NonProperStrand	2	chr5	115940293	115940379	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	2	-inf
chr1	166179302	166179329	protein_coding	Slc19a2	utr5	ENSMUSG00000040918	ProperStrand	22	chr3	123210854	123210936	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-9.5637
chr7	84739722	84739812	LINE	L1MCb	L1	chr7L1MCb84739535	ProperStrand	1	chr7	84740087	84740167	LINE	L1_Mur2	L1	chr7L1_Mur284740044	NonProperStrand	1	1	-inf
chr2	120218086	120220104	protein_coding	Tmem87a	exon	ENSMUSG00000033808	ProperStrand	5	chr3	123210872	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-6.8746
chr16	57391723	57391781	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr8	32260335	32260400	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	NonProperStrand	14	1	-13.2720
chr7	134939849	134939929	protein_coding	Setd1a	exon	ENSMUSG00000042308	ProperStrand	58	chr19	8799584	8799644	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-6.8339
chr15	78240525	78240558	protein_coding	Mpst	exon	ENSMUSG00000071711	ProperStrand	7	chr5	130300466	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-11.0020
chr17	27559700	27559717	protein_coding	Grm4	utr3	ENSMUSG00000063239	ProperStrand	147	chr9	64022855	64022922	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-6.2482
chr15	81977701	81977752	protein_coding	Srebf2	utr5	ENSMUSG00000022463	ProperStrand	592	chr5	148113281	148113297	protein_coding	Cdx2	utr3	ENSMUSG00000029646	ProperStrand	276	1	-5.7107
chr17	12585979	12585995	protein_coding	Plg	exon	ENSMUSG00000059481	ProperStrand	86	chr9	120039567	120039589	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.6773
chr12	88488443	88496424	protein_coding	Pomt2	exon	ENSMUSG00000034126	NonProperStrand	331	chr11	62418013	62418082	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-2.3957
chr11	50352105	50352121	LINE	Lx2B	L1	chr11Lx2B50351404	ProperStrand	1	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-inf
chr14	68295458	68295559	protein_coding	Cdca2	exon	ENSMUSG00000048922	ProperStrand	50	chr4	131866629	131866675	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	1	-9.4714
chr9	78326822	78327178	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr11	77994800	77994828	snoRNA	ENSMUSG00000064540_Snord42a	.	ENSMUSG00000064540	ProperStrand	142	3	-11.0588
chr16	17807048	17807065	protein_coding	Scarf2	exon	ENSMUSG00000012017	ProperStrand	5	chr4	131908800	131908891	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-19.0004
chr4	122970425	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	chr17	35088957	35088999	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-0.8225
chr1	180925310	180925329	protein_coding	Smyd3	intron	ENSMUSG00000055067	ProperStrand	231	chr15	79908929	79908957	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-2.9416
chr5	125876578	125876658	LTR	ORR1A2	MaLR	chr5ORR1A2125876601	ProperStrand	1	chr1	192906954	192907044	protein_coding	Nsl1	utr3	ENSMUSG00000062510	NonProperStrand	2	1	-inf
chr11	78081884	78081943	protein_coding	2610507B11Rik	exon	ENSMUSG00000010277	ProperStrand	246	chr15	71624775	71624799	snoRNA	ENSMUSG00000088895_SNORA81	.	ENSMUSG00000088895	ProperStrand	348	1	-6.9788
chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	chr8	112063644	112063661	protein_coding	Pmfbp1	intron	ENSMUSG00000031727	NonProperStrand	17	1	-12.0046
chr2	112613125	112613143	protein_coding	Ryr3	intron	ENSMUSG00000057378	NonProperStrand	24	chr16	23111417	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.7195
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr16	93609111	93610108	protein_coding	Cbr1	exon	ENSMUSG00000051483	ProperStrand	2	1	-16.1911
chr5	31443536	31443611	protein_coding	Mpv17	utr3	ENSMUSG00000090262	ProperStrand	13	chr4	131908299	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.0703
chr19	5382959	5383015	protein_coding	Sart1	exon	ENSMUSG00000039148	ProperStrand	32	chr6	8185634	8185650	protein_coding	Mios	utr3	ENSMUSG00000042447	NonProperStrand	40	1	-15.4055
chr17	30933173	30933190	protein_coding	Dnahc8	intron	ENSMUSG00000033826	NonProperStrand	40	chr8	73419664	73419784	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.8776
chr2	153171941	153171968	protein_coding	Asxl1	utr5	ENSMUSG00000042548	ProperStrand	76	chr5	115939561	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-7.3940
chr4	119941547	119941564	protein_coding	Foxo6	exon	ENSMUSG00000052135	ProperStrand	31	chr15	79913288	79913346	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-8.0396
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr2	103561835	103561935	protein_coding	Nat10	utr3	ENSMUSG00000027185	ProperStrand	124	1	-6.3553
chr18	10652353	10658788	protein_coding	Abhd3	exon	ENSMUSG00000002475	ProperStrand	6	chr6	113445483	113445583	protein_coding	Prrt3	exon	ENSMUSG00000045009	ProperStrand	4	2	-19.3245
chr12	40016533	40016551	LTR	MTE2b	MaLR	chr12MTE2b40016277	ProperStrand	1	chr11	6520372	6520446	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	1	-inf
chr6	30162058	30162074	protein_coding	Ube2h	utr3	ENSMUSG00000039159	ProperStrand	96	chr10	94956288	94956348	protein_coding	Mrpl42	exon	ENSMUSG00000062981	ProperStrand	9	1	-16.2591
chr5	81522762	81522780	protein_coding	Lphn3	intron	ENSMUSG00000037605	NonProperStrand	39	chr11	116938652	116938752	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-7.0144
chr4	3761660	3761679	protein_coding	Rps20	exon	ENSMUSG00000028234	ProperStrand	71	chr2	26493380	26493451	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-3.4316
chr19	23288649	23289139	protein_coding	Smc5	exon	ENSMUSG00000024943	ProperStrand	146	chr11	115507218	115507249	protein_coding	Grb2	exon	ENSMUSG00000059923	ProperStrand	12	1	-14.8230
chr18	10181560	10181640	protein_coding	Rock1	utr5	ENSMUSG00000024290	ProperStrand	21	chr4	52500507	52500597	protein_coding	Smc2	utr3	ENSMUSG00000028312	ProperStrand	50	1	-15.7884
chr2	91608029	91608058	protein_coding	Ambra1	intron	ENSMUSG00000040506	ProperStrand	65	chr14	57307316	57307372	protein_coding	Mphosph8	intron	ENSMUSG00000079184	ProperStrand	29	1	-14.6364
chr14	64112697	64112756	protein_coding	Tdh	exon	ENSMUSG00000021953	ProperStrand	67	chr1	162967514	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	3	-8.2368
chr8	13876101	13876226	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	chr9	40612125	40612148	snoRNA	ENSMUSG00000075924_Snord14d	.	ENSMUSG00000075924	ProperStrand	131	1	-5.6048
chr17	24343586	24343602	protein_coding	Ntn3	exon	ENSMUSG00000079662	ProperStrand	237	chr7	52382231	52382275	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-5.5681
chr9	102634240	102634295	protein_coding	Amotl2	utr3	ENSMUSG00000032531	ProperStrand	54	chr7	29136534	29136574	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-4.4839
chr17	56733384	56735094	protein_coding	Safb	exon	ENSMUSG00000071054	ProperStrand	79	chr3	123210908	123210933	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	6	-10.9078
chr12	83521613	83523415	protein_coding	Sipa1l1	exon	ENSMUSG00000042700	ProperStrand	84	chr2	158182174	158182254	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	2	-7.2632
chr3	45780645	45780665	LINE	Lx2B	L1	chr3Lx2B45780445	ProperStrand	34	chr16	23110844	23110986	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.8174
chr15	66421691	66421771	protein_coding	Phf20l1	intron	ENSMUSG00000072501	ProperStrand	13	chr12	106269284	106269374	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	5	-inf
chr14	15572352	15572371	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr18	35716685	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-1.5426
chr4	43505655	43505685	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr14	31483897	31483972	protein_coding	Rft1	intron	ENSMUSG00000052395	ProperStrand	5	2	-13.2023
chr7	138714573	138714663	protein_coding	Bub3	utr3	ENSMUSG00000066979	ProperStrand	24	chr12	106269401	106269481	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-5.9228
chr7	38523304	38523320	protein_coding	Zfp536	intron	ENSMUSG00000043456	ProperStrand	57	chr7	29136525	29136575	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.4519
chr5	148250939	148250955	protein_coding	Pan3	intron	ENSMUSG00000029647	ProperStrand	57	chr11	106362638	106362684	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-7.5068
chr13	59772578	59772630	protein_coding	Golm1	intron	ENSMUSG00000021556	ProperStrand	27	chr16	23110908	23110998	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.1875
chrX	127672467	127672484	LINE	L1_Mus1	L1	chrXL1_Mus1127672424	ProperStrand	1	chr10	23505152	23505204	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-inf
chr11	116220575	116221160	protein_coding	Rnf157	exon	ENSMUSG00000052949	ProperStrand	32	chr3	96528184	96528254	snoRNA	ENSMUSG00000065669_SNORA5	.	ENSMUSG00000065669	ProperStrand	180	1	-12.3800
chr1	122237194	122237211	protein_coding	C1ql2	utr5	ENSMUSG00000036907	NonProperStrand	9	chr8	32260335	32260423	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-8.4420
chr9	20896242	20896258	antisense	1700084C06Rik	.	ENSMUSG00000086016	ProperStrand	4	chr18	35716812	35716831	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-7.5042
chr3	87717990	87718868	protein_coding	Hdgf	exon	ENSMUSG00000004897	ProperStrand	117	chr10	110918547	110918638	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	18	-19.7333
chr3	53279320	53281410	protein_coding	2810046L04Rik	utr3	ENSMUSG00000049504	ProperStrand	15	chr16	23110892	23110982	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.0842
chr4	8678939	8679039	protein_coding	Chd7	exon	ENSMUSG00000041235	ProperStrand	80	chr9	120037983	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-4.1574
chr9	79915104	79915120	protein_coding	Senp6	utr5	ENSMUSG00000034252	ProperStrand	110	chr9	64659390	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-7.7158
chr11	62211891	62214729	protein_coding	Ncor1	exon	ENSMUSG00000018501	ProperStrand	132	chr5	73563222	73563238	protein_coding	Fryl	intron	ENSMUSG00000070733	ProperStrand	173	1	-9.6068
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	40865562	40865578	protein_coding	Ubash3b	intron	ENSMUSG00000032020	ProperStrand	42	2	-8.4875
chr16	59144740	59144758	LTR	RMER13A	ERVK	chr16RMER13A59144125	NonProperStrand	1	chr10	79755425	79755520	protein_coding	Rps15	utr5	ENSMUSG00000063457	NonProperStrand	2	1	-inf
chrX	12182307	12182323	protein_coding	Atp6ap2	exon	ENSMUSG00000031007	NonProperStrand	4	chr5	121655099	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-9.2889
chr7	51828028	51828044	protein_coding	Napsa	exon	ENSMUSG00000002204	ProperStrand	88	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-6.9775
chr2	38498932	38499403	protein_coding	Psmb7	exon	ENSMUSG00000026750	ProperStrand	18	chr10	23505190	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.2069
chr4	131865855	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr2	103880871	103880961	snoRNA	ENSMUSG00000087739_SCARNA21	.	ENSMUSG00000087739	ProperStrand	50	1	-2.0577
chr19	9495140	9495230	LTR	MERVL-int	ERVL	chr19MERVL-int9494803	NonProperStrand	1	chr19	9495259	9495350	LTR	ORR1A2	MaLR	chr19ORR1A29495216	NonProperStrand	1	1	-inf
chr12	112830962	112830978	protein_coding	Mark3	exon	ENSMUSG00000007411	NonProperStrand	22	chr16	23110828	23110999	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.8207
chr4	129324945	129324972	protein_coding	Kpna6	utr3	ENSMUSG00000003731	ProperStrand	39	chr7	138459653	138459669	protein_coding	Cuzd1	exon	ENSMUSG00000040205	NonProperStrand	59	1	-14.2122
chr6	115737251	115737267	protein_coding	Cand2	exon	ENSMUSG00000030319	ProperStrand	40	chr15	102314606	102316390	protein_coding	Pcbp2	exon	ENSMUSG00000056851	ProperStrand	164	1	-12.1141
chr13	56983171	56983188	protein_coding	Trpc7	intron	ENSMUSG00000021541	ProperStrand	50	chr9	120038552	120038661	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.3693
chr5	11164975	11165065	LINE	L1Md_A	L1	chr5L1Md_A11164320	NonProperStrand	1	chr17	35521419	35521499	protein_coding	H2-Q4	utr3	ENSMUSG00000035929	NonProperStrand	10	1	-inf
chr8	26827320	26827337	protein_coding	Whsc1l1	utr3	ENSMUSG00000054823	NonProperStrand	17	chr17	5208337	5208353	protein_coding	Arid1b	intron	ENSMUSG00000069729	ProperStrand	28	1	-17.3745
chr3	98120370	98120400	protein_coding	Phgdh	exon	ENSMUSG00000053398	ProperStrand	46	chr9	120038562	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.5226
chr13	3559288	3561133	protein_coding	Gdi2	exon	ENSMUSG00000021218	ProperStrand	49	chr3	108357255	108357292	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-4.9302
mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr1	125477613	125477630	protein_coding	Dpp10	intron	ENSMUSG00000036815	ProperStrand	14	1	-8.8326
chr17	23959261	23959299	protein_coding	Srrm2	intron	ENSMUSG00000039218	ProperStrand	521	chr19	8798740	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	3	-3.4657
chr6	124765144	124765234	protein_coding	Usp5	utr3	ENSMUSG00000038429	ProperStrand	35	chr16	23111742	23111822	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.8115
chr2	69193622	69193677	LINE	L1Md_F2	L1	chr2L1Md_F269191897	ProperStrand	54	chr5	130300434	130300477	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-4.7136
chr13	114113333	114113350	protein_coding	BC067074	exon	ENSMUSG00000021763	NonProperStrand	62	chr11	55296285	55296327	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-6.1153
chr9	61762242	61762312	protein_coding	Rplp1	utr5	ENSMUSG00000007892	ProperStrand	116	chr15	36538258	36538358	protein_coding	Pabpc1	utr5	ENSMUSG00000022283	ProperStrand	908	1	-6.5734
chr11	105976982	105977000	protein_coding	Map3k3	intron	ENSMUSG00000020700	ProperStrand	36	chr11	4043338	4043354	protein_coding	Ccdc157	utr3	ENSMUSG00000051427	ProperStrand	11	1	-17.6156
chr5	97528600	97528649	protein_coding	Paqr3	exon	ENSMUSG00000055725	ProperStrand	10	chr16	23110911	23110961	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-5.0079
chr11	87240282	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	chr11	97642952	97643055	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	7	-8.6165
chr15	34370543	34370562	protein_coding-noncoding	Rpl30	utr3	ENSMUSG00000058600	ProperStrand	30	chr19	8963062	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.5028
chr1	134465558	134465574	protein_coding	Nfasc	utr3	ENSMUSG00000026442	NonProperStrand	48	chr7	30074411	30074427	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-10.8776
chr18	51912184	51912274	LINE	L1Md_F2	L1	chr18L1Md_F251912115	NonProperStrand	1	chr18	24372706	24372786	protein_coding	Galnt1	intron	ENSMUSG00000000420	NonProperStrand	1	1	-inf
chr1	134979616	134979658	protein_coding	Pik3c2b	intron	ENSMUSG00000026447	ProperStrand	24	chr17	13115735	13115784	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	1	-9.3786
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr13	51743581	51743703	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	4	-5.6831
chr2	86138158	86138174	protein_coding	Olfr1052	exon	ENSMUSG00000047149	NonProperStrand	119	chr9	120039533	120039580	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.1294
chr11	98314871	98315122	protein_coding	Grb7	exon	ENSMUSG00000019312	ProperStrand	10	chr4	131865855	131865918	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.0395
chrX	71589886	71589906	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr9	120038008	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	2	-3.4249
chr18	10052132	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr9	59519441	59519525	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	5	-12.7340
chr2	51967491	51967581	protein_coding	Rif1	exon	ENSMUSG00000036202	ProperStrand	201	chr8	86221940	86222021	protein_coding	Pkn1	intron	ENSMUSG00000057672	ProperStrand	36	1	-11.9199
chr18	32263317	32263333	protein_coding	Iws1	utr3	ENSMUSG00000024384	ProperStrand	72	chr11	62416602	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-4.8136
chr2	90235293	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	30329686	30329730	protein_coding	Ier5l	utr5	ENSMUSG00000089762	ProperStrand	4	1	-10.0500
chr5	141090405	141090422	protein_coding	Lfng	exon	ENSMUSG00000029570	NonProperStrand	92	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-6.8894
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr8	131234275	131234293	protein_coding	Itgb1	exon	ENSMUSG00000025809	ProperStrand	35	1	-9.0572
chr13	13450269	13450339	protein_coding	Gpr137b	utr3	ENSMUSG00000021306	ProperStrand	4	chr7	116663649	116663739	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-7.9103
chr5	33241711	33244154	protein_coding	Depdc5	exon	ENSMUSG00000037426	ProperStrand	26	chr16	23110845	23110868	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.2392
chr13	54783555	54783581	protein_coding	Rnf44	exon	ENSMUSG00000034928	ProperStrand	90	chr4	133574127	133574143	protein_coding	Lin28a	exon	ENSMUSG00000050966	ProperStrand	55	1	-12.6741
chr2	26231176	26231680	protein_coding	Snapc4	exon	ENSMUSG00000036281	ProperStrand	19	chr7	117189870	117189960	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-5.5364
chr5	135858996	135859514	protein_coding	Pom121	exon	ENSMUSG00000053293	ProperStrand	127	chr15	98350148	98350165	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-3.3528
chr8	18678613	18678634	protein_coding	Mcph1	intron	ENSMUSG00000039842	ProperStrand	34	chr11	98878344	98878377	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	2	-11.9120
chr11	87794850	87794940	protein_coding	Dynll2	utr3	ENSMUSG00000020483	ProperStrand	22	chr11	102295333	102295509	protein_coding	Grn	exon	ENSMUSG00000034708	ProperStrand	43	1	-16.0377
chr2	121906133	121909167	protein_coding	Spg11	exon	ENSMUSG00000033396	ProperStrand	32	chr16	23111385	23111447	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.2238
chr7	108440949	108440967	protein_coding	Atg16l2	intron	ENSMUSG00000047767	ProperStrand	121	chr3	68889147	68889215	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-2.0469
chr14	37938484	37939134	protein_coding	Ghitm	exon	ENSMUSG00000041028	ProperStrand	26	chr1	88247769	88247859	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-6.7483
chr2	25421639	25421656	protein_coding	Mamdc4	exon	ENSMUSG00000026941	ProperStrand	11	chr7	134110716	134111233	protein_coding	Sez6l2	exon	ENSMUSG00000030683	ProperStrand	94	1	-15.8492
chr17	33788886	33788973	protein_coding	Hnrnpm	intron	ENSMUSG00000059208	ProperStrand	56	chr4	131908689	131908709	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.3189
chr11	74650052	74650083	protein_coding	Mnt	exon	ENSMUSG00000000282	ProperStrand	56	chr8	32260388	32260422	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	2	-7.8890
chr5	116045303	116045379	protein_coding	Gcn1l1	exon	ENSMUSG00000041638	ProperStrand	408	chr1	187066870	187066918	snoRNA	ENSMUSG00000077571_Snora36b	.	ENSMUSG00000077571	ProperStrand	244	8	-22.5240
chr16	91624683	91625647	protein_coding	Gart	exon	ENSMUSG00000022962	ProperStrand	200	chr18	33954912	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-1.4844
chr5	23268233	23274586	protein_coding	Pus7	exon	ENSMUSG00000057541	ProperStrand	23	chr4	131908689	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	6	-15.9454
chr5	145921909	145921999	protein_coding	Ptcd1	exon	ENSMUSG00000029624	ProperStrand	8	chr5	108334237	108334317	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-8.8896
chr13	46910711	46911665	protein_coding	Kif13a	utr5	ENSMUSG00000021375	ProperStrand	466	chr8	98270003	98270083	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-1.8279
chr3	79319041	79319141	protein_coding	Fnip2	exon	ENSMUSG00000061175	ProperStrand	45	chr17	35088957	35088980	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-6.4359
chr17	56409035	56409098	protein_coding	Ticam1	utr3	ENSMUSG00000047123	ProperStrand	1	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-inf
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr14	63190654	63190673	protein_coding	Fam124a	intron	ENSMUSG00000035184	ProperStrand	14	1	-11.5511
chr8	46334013	46334106	protein_coding	F11	exon	ENSMUSG00000031645	ProperStrand	21	chr16	23111373	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.9586
chr2	16278620	16278638	protein_coding	Plxdc2	utr5	ENSMUSG00000026748	NonProperStrand	44	chr11	116938560	116938693	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	2	-10.9362
chr19	29086304	29086364	protein_coding	Cdc37l1	intron	ENSMUSG00000024780	NonProperStrand	3	chr16	23109053	23109093	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	3	-inf
chr10	80640895	80644964	protein_coding	Eef2	utr3	ENSMUSG00000034994	ProperStrand	2244	chr10	23506278	23506307	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	2	-1.4399
chr10	44190077	44190167	protein_coding	Prdm1	intron	ENSMUSG00000038151	ProperStrand	9	chr7	54443002	54443082	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	1	-15.4594
chr12	29316508	29316587	protein_coding	Rps7	exon	ENSMUSG00000061477	ProperStrand	129	chr4	131908236	131908302	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-2.9348
chr7	37547991	37548008	protein_coding	Tshz3	intron	ENSMUSG00000021217	NonProperStrand	11	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	2	-21.5848
chr18	24363855	24363872	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr11	20548012	20548029	protein_coding	Sertad2	exon	ENSMUSG00000049800	ProperStrand	21	1	-13.4985
chr18	32405206	32405222	protein_coding	Ercc3	exon	ENSMUSG00000024382	ProperStrand	280	chr5	151755616	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-4.7183
chr2	44700794	44700874	protein_coding	Gtdc1	intron	ENSMUSG00000036890	ProperStrand	22	chr5	121655062	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	3	-13.3119
chr13	107452987	107453003	LTR	RMER10B	ERVL	chr13RMER10B107452844	ProperStrand	1	chr14	76247741	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-inf
chr2	166395934	166395952	protein_coding	Prex1	exon	ENSMUSG00000039621	ProperStrand	20	chr12	112779228	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	2	-11.2407
chr2	31801444	31801460	protein_coding	Lamc3	utr3	ENSMUSG00000026840	NonProperStrand	14	chr7	117189864	117189909	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-9.1439
chr5	108336363	108336468	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	chr2	166890502	166890580	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	2	-0.8996
chr10	114779566	114779630	protein_coding	Tmem19	exon	ENSMUSG00000069520	ProperStrand	24	chr7	116663721	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.1859
chr8	122364084	122364109	protein_coding	Cotl1	exon	ENSMUSG00000031827	ProperStrand	11	chrX	93136011	93136027	protein_coding	Las1l	exon	ENSMUSG00000057421	ProperStrand	248	1	-13.9294
chr11	29607002	29607092	protein_coding	Rtn4	exon	ENSMUSG00000020458	ProperStrand	117	chr1	145626069	145626149	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-7.4960
chr7	54110423	54110496	protein_coding	Ldha	exon	ENSMUSG00000063229	ProperStrand	280	chr12	106269335	106269425	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-1.4925
chr10	127556546	127560361	protein_coding	Baz2a	exon	ENSMUSG00000040054	ProperStrand	274	chr2	26493391	26493482	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-2.3488
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chrX	20258564	20258612	protein_coding	Uba1	exon	ENSMUSG00000001924	ProperStrand	156	1	-6.7048
chr6	87795266	87795283	protein_coding	Cnbp	exon	ENSMUSG00000030057	ProperStrand	46	chr2	144087380	144087440	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-7.0736
chr18	77803924	77803941	protein_coding	8030462N17Rik	intron	ENSMUSG00000047466	ProperStrand	17	chr16	23111390	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.3471
chr10	60686512	60686602	protein_coding	Adamts14	intron	ENSMUSG00000059901	ProperStrand	17	chr11	97642981	97643061	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.8122
chr18	52928577	52928594	protein_coding	Sncaip	intron	ENSMUSG00000024534	NonProperStrand	16	chr7	13870707	13871922	protein_coding	Lig1	exon	ENSMUSG00000056394	ProperStrand	89	1	-15.2240
chr12	60173527	60173617	protein_coding	Pnn	exon	ENSMUSG00000020994	ProperStrand	42	chr7	117189864	117189944	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-6.9170
chr15	99843106	99843165	protein_coding	Larp4	utr3	ENSMUSG00000023025	ProperStrand	41	chr10	82456766	82456784	protein_coding	Chst11	intron	ENSMUSG00000034612	ProperStrand	170	1	-11.9922
chr10	83989627	83991298	protein_coding	Ckap4	exon	ENSMUSG00000046841	ProperStrand	60	chr4	131908300	131908409	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-4.2228
chr4	139482849	139482865	lincRNA	4933427I22Rik	exon	ENSMUSG00000085928	ProperStrand	62	chr2	26494801	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.0481
chr9	123009621	123009643	protein_coding	Zdhhc3	exon	ENSMUSG00000025786	ProperStrand	8	chr16	60481403	60481422	protein_coding	Epha6	intron	ENSMUSG00000055540	NonProperStrand	14	1	-20.5153
chr9	21390661	21390953	protein_coding	Carm1	exon	ENSMUSG00000032185	ProperStrand	82	chr5	130295496	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-4.6450
chr6	87930485	87930506	protein_coding	H1fx	utr3	ENSMUSG00000044927	ProperStrand	13	chr11	69483136	69483190	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-5.3217
chr17	46861595	46861611	protein_coding	Pex6	exon	ENSMUSG00000002763	ProperStrand	292	chr7	140853618	140853811	protein_coding	2700050L05Rik	utr3	ENSMUSG00000039990	ProperStrand	14	1	-13.1060
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr15	102986026	102986043	protein_coding	Smug1	utr3	ENSMUSG00000036061	NonProperStrand	7	1	-13.1405
chrX	148438313	148438432	protein_coding	Hsd17b10	exon	ENSMUSG00000025260	ProperStrand	10	chr6	83111671	83111687	protein_coding	1700003E16Rik	exon	ENSMUSG00000030030	ProperStrand	352	1	-13.4356
chr7	29603456	29603546	protein_coding-noncoding	Hnrnpl	utr5	ENSMUSG00000015165	ProperStrand	23	chr16	23111373	23111495	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-4.9111
chr16	22009733	22011575	protein_coding	Senp2	exon	ENSMUSG00000022855	ProperStrand	13	chrX	34622906	34622937	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-6.1263
chr8	46406045	46406061	protein_coding	Cyp4v3	exon	ENSMUSG00000079057	ProperStrand	13	chr17	23685733	23685762	tRNA	tRNA995-ArgCCT	.	1827511	ProperStrand	18	1	-18.8442
chr16	91405676	91405692	protein_coding	Ifnar2	utr3	ENSMUSG00000022971	NonProperStrand	23	chr17	35089181	35089235	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-7.3918
chr5	103854542	103891155	protein_coding	Ptpn13	utr5	ENSMUSG00000034573	NonProperStrand	74	chr11	33057047	33059960	protein_coding	Npm1	exon	ENSMUSG00000057113	ProperStrand	352	1	-9.3477
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr7	52382252	52382314	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	2	-2.6560
chr13	9833552	9833651	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr5	131950995	131951011	protein_coding	Auts2	utr5	ENSMUSG00000029673	NonProperStrand	37	1	-5.9002
chr11	78086787	78086944	protein_coding	2610507B11Rik	exon	ENSMUSG00000010277	ProperStrand	246	chr17	35089181	35089234	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	2	-4.9279
chr12	70283934	70284024	protein_coding	Rpl36al	exon	ENSMUSG00000049751	ProperStrand	10	chr7	116663649	116663729	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-5.9268
chr4	128874160	128874386	protein_coding	Yars	exon	ENSMUSG00000028811	ProperStrand	131	chr16	23111373	23111474	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	5	-3.5521
chr9	114472776	114472831	protein_coding	Trim71	utr5	ENSMUSG00000079259	ProperStrand	162	chr2	37255580	37255617	snoRNA	ENSMUSG00000077756_Snord90	.	ENSMUSG00000077756	ProperStrand	167	3	-19.3962
chr2	145077954	145209255	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	chr19	8799845	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	4	-2.8598
chr4	64785559	64785576	protein_coding	Pappa	utr5	ENSMUSG00000028370	ProperStrand	65	chr11	33057022	33060345	protein_coding	Npm1	exon	ENSMUSG00000057113	ProperStrand	352	1	-9.6079
chr11	6428088	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr9	15118535	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	2	-0.8889
chr10	61738528	61743786	protein_coding	Hk1	exon	ENSMUSG00000037012	ProperStrand	84	chr4	131865885	131865965	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.2741
chr5	115798585	115798627	protein_coding	Cox6a1	exon	ENSMUSG00000041697	ProperStrand	38	chr4	131866176	131866266	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-4.5291
chr8	34917216	34944790	protein_coding	Rbpms	exon	ENSMUSG00000031586	ProperStrand	58	chr18	33954917	33954943	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-3.5680
chr7	16534823	16534839	protein_coding	Ehd2	utr3	ENSMUSG00000074364	NonProperStrand	197	chr14	3930614	3930726	protein_coding	Gm3002	intron	ENSMUSG00000079399	ProperStrand	26	3	-19.5523
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr9	15119967	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-1.4118
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-1.1366
chr8	74991751	74991782	protein_coding	Cherp	exon	ENSMUSG00000052488	ProperStrand	43	chr4	131865929	131865987	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.3073
chr2	154375039	154375057	protein_coding	Necab3	intron	ENSMUSG00000027489	ProperStrand	7	chr7	29136525	29136585	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-6.5022
chr9	70960077	70960093	protein_coding	Aqp9	exon	ENSMUSG00000032204	NonProperStrand	118	chr19	8800355	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-2.3348
chr19	47170949	47205313	protein_coding	Pdcd11	intron	ENSMUSG00000025047	ProperStrand	137	chr4	131865855	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	5	-4.8880
chr11	62418046	62418090	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	chr8	113362421	113362512	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	4	-7.2385
chr1	90598741	90598757	protein_coding	Arl4c	utr5	ENSMUSG00000049866	ProperStrand	25	chr12	29316600	29318652	protein_coding	Rps7	exon	ENSMUSG00000061477	ProperStrand	129	1	-13.5509
chr3	156224612	156224628	lincRNA	4930570G19Rik	exon	ENSMUSG00000085084	ProperStrand	326	chr12	88778746	88778768	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-3.2629
chr19	5603834	5603863	protein_coding	Kat5	utr3	ENSMUSG00000024926	ProperStrand	20	chr19	43579408	43579425	protein_coding	Got1	intron	ENSMUSG00000025190	NonProperStrand	147	1	-13.7437
chr2	77029154	77029186	protein_coding	Sestd1	exon	ENSMUSG00000042272	ProperStrand	11	chr4	131865915	131865979	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-8.1386
chr7	134671427	134671523	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	chr18	35714145	35714244	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	6	-1.9893
chr19	5274802	5274837	protein_coding	Sf3b2	exon	ENSMUSG00000024853	ProperStrand	102	chr5	130300519	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.6503
chrX	94539935	94539953	protein_coding	Eda2r	intron	ENSMUSG00000034457	NonProperStrand	1	chr4	131865897	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr15	92188799	92188860	lincRNA	Gm16629	intron	ENSMUSG00000085294	ProperStrand	7	chr2	130103751	130103808	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-12.8927
chr17	24869757	24869773	protein_coding	Rpl3l	utr5	ENSMUSG00000002500	ProperStrand	1	chr3	123210929	123210985	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-inf
chr7	133939789	133939850	protein_coding	Aldoa	intron	ENSMUSG00000030695	ProperStrand	721	chr9	74878655	74878673	protein_coding	BC031353	intron	ENSMUSG00000034858	NonProperStrand	5	1	-13.5029
chr5	31374441	31374465	protein_coding	Cad	exon	ENSMUSG00000013629	NonProperStrand	6	chr17	34835820	34835868	protein_coding	Tnxb	exon	ENSMUSG00000033327	NonProperStrand	9	1	-18.9485
chr6	109670231	109670252	LINE	L3	CR1	chr6L3109670130	ProperStrand	2	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-inf
chr5	138539506	138539560	protein_coding	Zkscan1	intron	ENSMUSG00000029729	ProperStrand	5	chr10	110918576	110918666	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-8.4568
chr12	28370717	28370807	LINE	Lx4B	L1	chr12Lx4B28370487	NonProperStrand	1	chr12	28370843	28370933	LTR	RMER13B	ERVK	chr12RMER13B28370831	NonProperStrand	1	1	-inf
chr5	147198604	147198694	protein_coding	Wasf3	intron	ENSMUSG00000029636	ProperStrand	32	chr5	148495970	148496050	protein_coding	Flt1	intron	ENSMUSG00000029648	NonProperStrand	9	1	-18.0968
chr7	106987893	106987965	protein_coding	Spcs2	utr3	ENSMUSG00000035227	ProperStrand	17	chr7	117166773	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	7	-21.3209
chr12	80276976	80276993	protein_coding	Rdh11	utr3	ENSMUSG00000066441	NonProperStrand	23	chr1	162967783	162967806	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	1	-12.1888
chr10	77458012	77458102	protein_coding	Pfkl	exon	ENSMUSG00000020277	ProperStrand	179	chr7	29136543	29136623	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-0.7886
chr6	119902705	119902758	protein_coding	Wnk1	exon	ENSMUSG00000045962	ProperStrand	221	chr4	131865457	131865495	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-1.7359
chr5	110769586	110769688	protein_coding	P2rx2	exon	ENSMUSG00000029503	NonProperStrand	2	chr15	79913288	79913319	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-10.9071
chr1	71676390	71678631	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr1	9932566	9932595	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	3	-6.5902
chr2	139861857	139861887	protein_coding	Tasp1	intron	ENSMUSG00000039033	ProperStrand	6	chr16	23110909	23110957	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.7876
chr18	7926979	7927017	protein_coding	Wac	utr3	ENSMUSG00000024283	ProperStrand	38	chr12	112779159	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	20	-19.6476
chr9	88419023	88419041	SINE	B4	B4	chr9B488418988	ProperStrand	75	chr8	32260363	32260423	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-4.2046
chr12	83763367	83763384	protein_coding	Rgs6	intron	ENSMUSG00000021219	NonProperStrand	65	chr16	23110454	23110489	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.3262
chr4	79933209	79933232	LTR	RMER17B	ERVK	chr4RMER17B79933102	NonProperStrand	1	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr4	106913509	106913576	protein_coding	Lrrc42	exon	ENSMUSG00000028617	ProperStrand	28	chr11	77995191	77995244	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-7.7031
chr6	86799728	86799818	protein_coding	Aak1	utr5	ENSMUSG00000057230	ProperStrand	22	chr5	121655021	121655101	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.6854
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	2	-6.2717
chr2	168469398	168469447	protein_coding	Atp9a	exon	ENSMUSG00000027546	ProperStrand	16	chr16	23110454	23110523	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-8.2002
chr18	10052132	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chrX	19868661	19868677	protein_coding	Slc9a7	exon	ENSMUSG00000037341	ProperStrand	17	1	-11.3584
chr7	52636184	52642616	protein_coding	Snrnp70	exon	ENSMUSG00000063511	ProperStrand	61	chr7	29136554	29136634	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	8	-18.8013
chr17	35388386	35388422	protein_coding	Ddx39b	intron	ENSMUSG00000019432	ProperStrand	119	chr11	77995185	77995242	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	3	-11.4533
chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	chr19	8800084	8800119	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-3.0759
chr4	63207878	63207941	protein_coding	Atp6v1g1	intron	ENSMUSG00000039105	ProperStrand	10	chr11	69481343	69481433	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-6.6979
chr10	79430465	79430557	protein_coding	Wdr18	utr3	ENSMUSG00000035754	ProperStrand	16	chr5	111121066	111121126	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-9.0973
chr4	3849626	3849726	protein_coding	Plag1	intron	ENSMUSG00000003282	ProperStrand	8	chr9	50554510	50554528	protein_coding	2310030G06Rik	intron	ENSMUSG00000032062	ProperStrand	1	1	-inf
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr9	50665483	50665501	protein_coding	Ppp2r1b	intron	ENSMUSG00000032058	ProperStrand	22	1	-8.9418
chr2	127058353	127058700	protein_coding	Snrnp200	exon	ENSMUSG00000003660	ProperStrand	203	chr2	174253100	174253190	protein_coding	Ctsz	utr3	ENSMUSG00000016256	ProperStrand	13	1	-13.9872
chr18	33954685	33954718	lincRNA	2410004N09Rik	exon	ENSMUSG00000087590	ProperStrand	15	chr11	48617459	48617711	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	1	-12.6180
chr10	120709244	120712786	protein_coding	Tbc1d30	exon	ENSMUSG00000052302	ProperStrand	233	chr17	28876242	28876279	protein_coding	Mapk14	intron	ENSMUSG00000053436	ProperStrand	40	1	-11.4109
chr1	174242620	174242685	protein_coding	Igsf8	utr5	ENSMUSG00000038034	ProperStrand	25	chrX	71517855	71517955	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-8.2991
chr9	64846125	64846201	protein_coding	Ptplad1	intron	ENSMUSG00000033629	ProperStrand	13	chr10	23505192	23505282	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	6	-inf
chr1	81246513	81246593	protein_coding	9430031J16Rik	intron	ENSMUSG00000054976	ProperStrand	4	chr1	87483111	87483201	protein_coding	Sp110	intron	ENSMUSG00000070034	NonProperStrand	2	1	-inf
chr9	96019991	96020007	protein_coding	Gk5	exon	ENSMUSG00000041440	NonProperStrand	4	chr1	88247742	88247760	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-10.7122
chr6	113054951	113054997	protein_coding	Setd5	utr5	ENSMUSG00000034269	ProperStrand	162	chr9	15130745	15130831	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	2	-11.6034
chr5	74026274	74026291	protein_coding	Sgcb	utr3	ENSMUSG00000029156	ProperStrand	14	chr8	98269994	98270084	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-8.4626
chr5	103854542	103891155	protein_coding	Ptpn13	utr5	ENSMUSG00000034573	NonProperStrand	74	chr2	158457348	158457365	protein_coding	Actr5	exon	ENSMUSG00000037761	NonProperStrand	94	1	-11.9893
chr7	20367903	20367921	protein_coding	Cblc	intron	ENSMUSG00000040525	NonProperStrand	19	chr11	97643008	97643061	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-7.6872
chr12	112779147	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	chr5	130295414	130295507	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	16	-5.7070
chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	chr18	33954846	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	4	-2.0831
chrX	71483034	71483207	protein_coding	Flna	exon	ENSMUSG00000031328	ProperStrand	134	chr11	69483149	69483229	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.2094
chrX	140777313	140778837	protein_coding-noncoding	Alg13	utr3	ENSMUSG00000041718	ProperStrand	87	chr6	123089131	123089269	protein_coding	Clec4a2	exon	ENSMUSG00000030148	ProperStrand	44	1	-13.1936
chr13	97964130	97964209	protein_coding	Hexb	exon	ENSMUSG00000021665	ProperStrand	22	chr8	25920545	25921169	protein_coding	Adam5	exon	ENSMUSG00000031554	ProperStrand	49	1	-15.7772
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr6	135820109	135820125	protein_coding-noncoding	Grin2b	utr3	ENSMUSG00000030209	NonProperStrand	7	1	-13.1405
chr6	91423828	91427274	protein_coding	Tmem43	utr5	ENSMUSG00000030095	ProperStrand	14	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.0758
chr16	90221069	90221120	protein_coding	Sod1	utr5	ENSMUSG00000022982	ProperStrand	75	chr12	110918201	110918221	snoRNA	ENSMUSG00000065749_AF357428	.	ENSMUSG00000065749	ProperStrand	218	1	-10.2775
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr15	79908954	79908986	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	2	-2.8970
chr11	102169322	102169378	protein_coding	Ubtf	exon	ENSMUSG00000020923	ProperStrand	66	chr3	100845827	100845879	protein_coding	Ptgfrn	utr3	ENSMUSG00000027864	ProperStrand	67	1	-12.8991
chr11	117019940	117020030	protein_coding	Sec14l1	utr3	ENSMUSG00000020823	ProperStrand	71	chr9	120038468	120038548	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.7411
chr10	59413458	59413509	protein_coding	Ddit4	exon	ENSMUSG00000020108	ProperStrand	49	chr17	24857763	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	4	-9.4586
chr2	23011328	23011344	protein_coding	Mastl	exon	ENSMUSG00000026779	ProperStrand	60	chr9	78329448	78329470	protein_coding	Eef1a1	utr5	ENSMUSG00000037742	ProperStrand	1990	2	-10.2642
chr4	131908686	131908709	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chrX	71517835	71517951	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-1.1520
chrX	19683228	19683244	protein_coding	Slc9a7	exon	ENSMUSG00000037341	NonProperStrand	136	chr10	110918548	110918591	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-2.0287
chr3	105758955	105762080	protein_coding	Atp5f1	exon	ENSMUSG00000000563	ProperStrand	28	chr7	135833924	135833941	protein_coding	Inpp5f	intron	ENSMUSG00000042105	NonProperStrand	2	1	-inf
chr14	61398407	61398423	protein_coding	C1qtnf9	exon	ENSMUSG00000071347	ProperStrand	187	chr17	24665441	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-2.8291
chr2	90235312	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	108751745	108751761	protein_coding	Osbpl9	intron	ENSMUSG00000028559	NonProperStrand	12	1	-7.6663
chr2	37502726	37502742	protein_coding	Strbp	utr5	ENSMUSG00000026915	ProperStrand	90	chr18	73693165	73693184	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-4.7381
chr2	180317639	180318121	protein_coding	1600027N09Rik	exon	ENSMUSG00000027569	ProperStrand	7	chr16	23110472	23110562	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-6.6152
chrX	101282068	101282126	protein_coding	C77370	exon	ENSMUSG00000046449	ProperStrand	10	chr16	23110829	23110919	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.7978
chr19	5844382	5844443	non_coding	Neat1	.	ENSMUSG00000092274	ProperStrand	63	chr9	120039605	120039623	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-5.5439
chr2	172181777	172181877	protein_coding	Aurka	utr3	ENSMUSG00000027496	ProperStrand	31	chr13	91064010	91064145	protein_coding	Rps23	exon	ENSMUSG00000049517	ProperStrand	34	2	-19.0313
chr5	143665915	143666030	protein_coding	Actb	exon	ENSMUSG00000029580	ProperStrand	446	chr7	52381719	52381781	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-3.6860
chr2	26494707	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	chr10	23505554	23505627	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	8	-1.8771
chr12	110888878	110888935	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr4	131866193	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	4	-2.1993
chr2	90235315	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr15	82210572	82210588	protein_coding	Cyp2d22	utr5	ENSMUSG00000061740	NonProperStrand	18	1	-6.8363
chr6	29324945	29324977	protein_coding	Calu	utr3	ENSMUSG00000029767	ProperStrand	47	chr4	131908236	131908296	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-3.2856
chr18	42683568	42683603	protein_coding	Tcerg1	exon	ENSMUSG00000024498	ProperStrand	210	chr7	116664794	116664884	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-0.7322
chr8	72613823	72613839	protein_coding	Hapln4	utr3	ENSMUSG00000007594	NonProperStrand	85	chr17	20504247	20504264	protein_coding	Vmn2r107	intron	ENSMUSG00000056910	NonProperStrand	7	1	-17.0024
chr1	54870214	54870231	protein_coding	Ankrd44	intron	ENSMUSG00000052331	ProperStrand	27	chr19	8963027	8963085	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.6995
chr4	134487122	134487138	protein_coding	Syf2	exon	ENSMUSG00000028821	ProperStrand	7	chr17	35089181	35089236	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-9.8638
chr11	40523757	40527548	protein_coding	Hmmr	exon	ENSMUSG00000020330	ProperStrand	61	chr18	35716787	35716867	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	9	-19.7150
chr7	49731232	49731263	protein_coding	Zfp141	exon	ENSMUSG00000092416	ProperStrand	17	chr5	125884617	125884654	tRNA	tRNA1317-AlaTGC	.	1142737	ProperStrand	149	1	-14.0514
chr16	17764374	17764451	protein_coding-noncoding	Klhl22	utr5	ENSMUSG00000022750	ProperStrand	5	chr1	87983918	87983997	snoRNA	ENSMUSG00000077274_SNORA26	.	ENSMUSG00000077274	ProperStrand	361	1	-14.8864
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr9	108700786	108700802	protein_coding	Ip6k2	exon	ENSMUSG00000032599	ProperStrand	16	1	-9.5937
chr4	131908239	131908299	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	chr8	112363232	112363275	snoRNA	ENSMUSG00000077549_Snord71	.	ENSMUSG00000077549	ProperStrand	196	3	-0.9975
chr2	178194847	178194864	protein_coding	Cdh26	exon	ENSMUSG00000039155	NonProperStrand	77	chr4	149095103	149095122	protein_coding	Tmem201	intron	ENSMUSG00000044700	NonProperStrand	2	1	-21.6773
chr17	24306329	24306370	protein_coding	Atp6v0c	utr5	ENSMUSG00000024121	ProperStrand	75	chr12	55797813	55797872	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	2	-11.6435
chr10	23506297	23506348	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	chr8	32260335	32260386	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	3	-0.7295
chr13	67690665	67690702	protein_coding	AA987161	utr3	ENSMUSG00000058093	ProperStrand	5	chr11	97642952	97643069	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-12.1765
chr14	55189337	55195079	protein_coding	Jub	exon	ENSMUSG00000022178	ProperStrand	25	chr9	15119646	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-7.1238
chr18	71050822	71050840	LTR	ORR1D1	MaLR	chr18ORR1D171050550	NonProperStrand	2	chr4	68423440	68423456	protein_coding	Dbc1	exon	ENSMUSG00000028351	ProperStrand	78	1	-21.9144
chr3	132337041	132337718	protein_coding	Aimp1	exon	ENSMUSG00000028029	ProperStrand	4	chr16	95218874	95218890	protein_coding	Kcnj6	utr5	ENSMUSG00000043301	NonProperStrand	16	1	-21.9369
chr4	43598760	43598777	protein_coding	Rgp1	utr3	ENSMUSG00000028468	ProperStrand	22	chr4	131908805	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-7.4295
chr8	98242105	98242174	protein_coding	Setd6	exon	ENSMUSG00000031671	ProperStrand	35	chrX	71517865	71517955	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-7.6204
chr13	11783851	12051895	protein_coding	Ryr2	intron	ENSMUSG00000021313	ProperStrand	61	chr8	73419656	73419776	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	4	-10.6541
chr1	168082911	168087666	protein_coding	Gpa33	exon	ENSMUSG00000000544	ProperStrand	33	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-8.1794
chr2	158451026	158457364	protein_coding	Actr5	exon	ENSMUSG00000037761	NonProperStrand	94	chr4	131908236	131908426	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-1.6966
chr1	194571790	194571880	snRNA	ENSMUSG00000064881_U5	.	ENSMUSG00000064881	ProperStrand	187	chr1	89673530	89673686	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	3	-4.1178
chr9	15119631	15119758	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	chr11	79518197	79518226	tRNA	tRNA550-ThrCGT	.	771944	ProperStrand	21	1	-4.5745
chr17	65452916	65452938	LTR	MTC	MaLR	chr17MTC65452903	NonProperStrand	12	chr19	8799028	8799093	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	2	-14.5040
chr2	90235290	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	7502333	7502350	protein_coding	Rtn3	exon	ENSMUSG00000024758	NonProperStrand	30	1	-5.8128
chr10	76537109	76537160	protein_coding	Col18a1	exon	ENSMUSG00000001435	ProperStrand	287	chr9	15118284	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-0.9699
chr10	59761973	59765178	protein_coding	Psap	utr3	ENSMUSG00000004207	ProperStrand	124	chr16	23110852	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-1.3923
chr14	67670789	67670815	protein_coding	Ppp2r2a	intron	ENSMUSG00000022052	ProperStrand	45	chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	1	-9.0819
chr7	109148522	109148540	protein_coding	Numa1	utr5	ENSMUSG00000066306	ProperStrand	148	chr2	166888978	166889035	snoRNA	ENSMUSG00000077515_SNORD12	.	ENSMUSG00000077515	ProperStrand	191	1	-9.1805
chr16	76294974	76295046	protein_coding	Nrip1	utr5	ENSMUSG00000048490	ProperStrand	50	chr17	35089182	35089237	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-5.8427
chrX	140780228	140781265	protein_coding-noncoding	Alg13	utr3	ENSMUSG00000041718	ProperStrand	87	chr7	117189986	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.6703
chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	chr12	29316492	29316519	protein_coding	Rps7	exon	ENSMUSG00000061477	ProperStrand	129	1	-6.5884
chr4	29052887	29052977	LTR	RLTR26	ERVK	chr4RLTR2629052898	NonProperStrand	1	chr4	29053110	29053200	pseudogene	Gm11918	.	ENSMUSG00000080911	NonProperStrand	1	1	-inf
chr4	43505720	43505820	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr7	5062342	5062362	protein_coding	Rfpl4	exon	ENSMUSG00000035191	NonProperStrand	27	3	-10.9945
chr16	22138367	22138425	protein_coding	Igf2bp2	intron	ENSMUSG00000033581	ProperStrand	23	chr7	116664826	116664916	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-4.3088
chr11	102736363	102736428	protein_coding	Eftud2	intron	ENSMUSG00000020929	ProperStrand	86	chr17	35299540	35299630	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-4.0911
chr14	87659491	87659512	LTR	MTEa	MaLR	chr14MTEa87659331	NonProperStrand	83	chr19	8798740	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-4.1815
chr3	123210854	123210954	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	chr3	96155086	96228019	tRNA	tRNA755-GlyCCC	.	764402	ProperStrand	8	1	-5.8655
chr2	90235315	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	63070812	63070829	protein_coding	Ctnna3	intron	ENSMUSG00000060843	ProperStrand	66	1	-4.2811
chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	chr4	119941547	119941564	protein_coding	Foxo6	exon	ENSMUSG00000052135	ProperStrand	31	1	-9.4380
chr8	112833096	112836065	protein_coding	Hydin	exon	ENSMUSG00000059854	NonProperStrand	42	chr7	52381975	52382014	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-7.4225
chr11	33056990	33061582	protein_coding	Npm1	exon	ENSMUSG00000057113	ProperStrand	352	chr15	79913288	79913344	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-1.6467
chr11	98799429	98799446	protein_coding	Rara	intron	ENSMUSG00000037992	NonProperStrand	7	chr15	34370619	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-7.8301
chr15	58289031	58289079	protein_coding	D15Ertd621e	utr3	ENSMUSG00000037119	ProperStrand	26	chr4	59766122	59766139	protein_coding	E130308A19Rik	utr3	ENSMUSG00000045071	ProperStrand	41	1	-15.8070
chr11	94937586	94937637	protein_coding	Itga3	exon	ENSMUSG00000001507	ProperStrand	21	chr1	168239214	168239230	protein_coding	5330438I03Rik	exon	ENSMUSG00000091393	ProperStrand	1	1	-inf
chr8	47621112	47621157	protein_coding	Acsl1	utr3	ENSMUSG00000018796	ProperStrand	23	chr9	15118326	15118385	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	2	-17.9184
chr7	128246225	128246242	protein_coding	Otoa	exon	ENSMUSG00000034990	NonProperStrand	6	chr9	15119648	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	5	-19.1954
chr16	20655429	20655639	protein_coding	Psmd2	exon	ENSMUSG00000006998	ProperStrand	99	chr4	131908689	131908722	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-2.2612
chr17	32536093	32536183	protein_coding-noncoding	Rasal3	utr3	ENSMUSG00000052142	ProperStrand	1	chr17	32536106	32536312	protein_coding	Rasal3	exon	ENSMUSG00000052142	ProperStrand	2	1	-inf
chr7	19591412	19591428	protein_coding	Irf2bp1	exon	ENSMUSG00000044030	NonProperStrand	81	chr5	33139046	33139082	protein_coding	RP23-118L1.1	intron	ENSMUSG00000093574	ProperStrand	9	1	-16.5737
chr9	64022894	64025564	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	chr7	117189955	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	5	-2.4824
chr17	12442399	12442468	protein_coding	Map3k4	exon	ENSMUSG00000014426	ProperStrand	36	chr16	23111777	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.7618
chr10	127523218	127523366	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr12	110874246	110874290	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	1	-5.3771
chr19	42225881	42225897	protein_coding	Marveld1	utr3	ENSMUSG00000044345	NonProperStrand	112	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.9034
chr6	6033854	6033870	protein_coding	Slc25a13	intron	ENSMUSG00000015112	ProperStrand	78	chr5	121655127	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.2652
chr17	32454064	32454164	protein_coding	Akap8	exon	ENSMUSG00000024045	ProperStrand	339	chr5	23358027	23358098	snoRNA	ENSMUSG00000093321_Snord93	.	ENSMUSG00000093321	ProperStrand	218	1	-7.2695
chr15	98350146	98350237	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	chr9	64022855	64022877	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	3	-2.0218
chr4	126044977	126045769	protein_coding	Eif2c3	exon	ENSMUSG00000028842	ProperStrand	8	chr4	131908274	131908354	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-5.0428
chr4	131399490	131399506	protein_coding	Mecr	exon	ENSMUSG00000028910	NonProperStrand	109	chr4	122970459	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-6.2323
chr7	99818126	99818204	protein_coding	Pcf11	utr5	ENSMUSG00000041328	ProperStrand	27	chr19	8798767	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-6.3699
chr19	8798483	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	chr2	130101267	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	14	-13.5850
chr15	82980097	82980192	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr5	108334202	108336493	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	22	-20.4470
chr11	120818390	120819621	protein_coding	Slc16a3	exon	ENSMUSG00000025161	ProperStrand	98	chr16	23110852	23110989	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-0.9782
chrX	34622960	34623036	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	chr5	125884616	125884637	tRNA	tRNA1317-AlaTGC	.	1156609	ProperStrand	149	1	-1.6473
chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr14	76247715	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	6	-3.5943
chr7	112629988	112630005	protein_coding	Prkcdbp	intron	ENSMUSG00000037060	NonProperStrand	43	chr4	131908810	131908881	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.7076
chr2	147011593	147011610	protein_coding	Nkx2-2	exon	ENSMUSG00000027434	ProperStrand	47	chr2	33013309	33013325	protein_coding	Ralgps1	exon	ENSMUSG00000038831	NonProperStrand	24	1	-15.6775
chr3	79689972	79690049	protein_coding	Fam198b	utr5	ENSMUSG00000027955	ProperStrand	9	chr10	80641693	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	1	-11.4246
chr3	88384906	88384956	protein_coding	Ssr2	exon	ENSMUSG00000041355	ProperStrand	22	chr18	35716812	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-9.8077
chr5	93379626	93379676	protein_coding	Shroom3	exon	ENSMUSG00000029381	ProperStrand	52	chr9	120038609	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	5	-14.2892
chr14	76920368	76920384	lincRNA	4930444M15Rik	exon	ENSMUSG00000085974	NonProperStrand	14	chr11	50079364	50079413	protein_coding	Maml1	exon	ENSMUSG00000050567	ProperStrand	29	1	-17.8291
chr2	174171517	174171781	protein_coding	Gnas	utr3	ENSMUSG00000027523	ProperStrand	41	chr4	55398472	55402844	protein_coding	Rad23b	exon	ENSMUSG00000028426	ProperStrand	86	1	-13.3601
chr2	130104664	130104710	protein_coding	Nop56	exon	ENSMUSG00000027405	ProperStrand	125	chr12	106269284	106269302	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	2	-4.8652
chr16	5256015	5256031	protein_coding	Fam86	utr5	ENSMUSG00000022544	ProperStrand	231	chr7	148634701	148634720	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-1.6556
chr3	4609497	4609587	LTR	MTA_Mm	MaLR	chr3MTA_Mm4609370	ProperStrand	1	chr18	9877649	9877729	protein_coding	Colec12	utr3	ENSMUSG00000036103	NonProperStrand	10	1	-inf
chr7	5062342	5062361	protein_coding	Rfpl4	exon	ENSMUSG00000035191	NonProperStrand	27	chr3	97571336	97571352	protein_coding	Pde4dip	exon	ENSMUSG00000038170	NonProperStrand	15	1	-17.7972
chr18	75162414	75162435	protein_coding	Rpl17	exon	ENSMUSG00000062328	ProperStrand	90	chr16	23111395	23111485	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.7546
chr4	137024713	137095930	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	chr14	76247710	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	4	-2.1658
chr17	45887668	45887699	lincRNA	Gm16862	intron	ENSMUSG00000086615	ProperStrand	9	chr9	15119646	15119968	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-6.2797
chr11	121210562	121215550	protein_coding	Wdr45l	exon	ENSMUSG00000025173	ProperStrand	8	chr4	135420223	135420240	protein_coding	Srsf10	utr3	ENSMUSG00000028676	ProperStrand	31	1	-18.2982
chr7	150700177	150700277	protein_coding	Nap1l4	utr3	ENSMUSG00000059119	ProperStrand	31	chr3	123210854	123210889	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.2114
chr13	120155166	120155196	protein_coding	Nnt	exon	ENSMUSG00000025453	ProperStrand	22	chr17	24857740	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.1130
chr16	35932620	35932636	protein_coding	Dtx3l	exon	ENSMUSG00000049502	ProperStrand	152	chr7	29136525	29136575	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-0.9814
chr19	56003755	56003771	protein_coding	Tcf7l2	intron	ENSMUSG00000024985	ProperStrand	103	chr4	131865929	131865974	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.0058
chr12	111760734	111760764	protein_coding	Ppp2r5c	exon	ENSMUSG00000017843	ProperStrand	36	chr16	23110914	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-4.1846
chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	chr17	24857717	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	6	-5.3024
chr19	47187741	47187808	protein_coding	Pdcd11	exon	ENSMUSG00000025047	ProperStrand	137	chr17	24857770	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.0609
chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	chr17	45548834	45548882	protein_coding	Cdc5l	exon	ENSMUSG00000023932	ProperStrand	59	1	-9.3036
chr13	9636396	9636413	protein_coding	Dip2c	exon	ENSMUSG00000048264	NonProperStrand	51	chr11	6428108	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.4890
chr5	31508706	31508776	protein_coding	Ppm1g	exon	ENSMUSG00000029147	ProperStrand	69	chr8	98269959	98270012	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-5.2689
chr7	119525058	119525075	protein_coding	Micalcl	exon	ENSMUSG00000030771	ProperStrand	4	chr18	35716788	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-7.5042
chr3	51338014	51338034	protein_coding	Setd7	intron	ENSMUSG00000037111	NonProperStrand	3	chr4	131866155	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	3	-inf
chr3	121869657	121869674	protein_coding	Abca4	exon	ENSMUSG00000028125	NonProperStrand	3	chr9	120039537	120039612	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	NonProperStrand	24	1	-inf
chr7	25830252	25830370	protein_coding	Grik5	intron	ENSMUSG00000003378	ProperStrand	13	chr8	77634346	77634367	protein_coding	Mcm5	intron	ENSMUSG00000005410	NonProperStrand	3	1	-inf
chr12	101445066	101445082	protein_coding	Calm1	utr3	ENSMUSG00000001175	ProperStrand	23	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-9.8701
chr13	114407593	114407610	protein_coding	Snx18	exon	ENSMUSG00000042364	ProperStrand	47	chr1	130049909	130049932	protein_coding	R3hdm1	exon	ENSMUSG00000056211	ProperStrand	43	1	-14.4887
chr11	121772702	121772722	protein_coding	Gm12588	intron	ENSMUSG00000062632	ProperStrand	9	chr16	23111770	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-9.0498
chr9	37192069	37192086	protein_coding	Hepacam	intron	ENSMUSG00000046240	NonProperStrand	29	chr17	71990949	71990999	snoRNA	ENSMUSG00000092713_CT010429.1	.	ENSMUSG00000092713	ProperStrand	182	1	-12.5575
chr1	88252835	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	chr3	95980324	95980410	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	4	-4.4486
chr12	17552949	17553088	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr2	26493364	26493485	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	20	-2.5507
chr5	122022773	122022844	protein_coding	Aldh2	exon	ENSMUSG00000029455	ProperStrand	108	chr16	23111763	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.0553
chr8	125627240	125628970	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	chr8	32260335	32260361	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-2.1936
chr2	134585491	134585509	LTR	ORR1C2-int	MaLR	chr2ORR1C2-int134585346	NonProperStrand	1	chr2	153035407	153035444	protein_coding	Tm9sf4	utr3	ENSMUSG00000068040	ProperStrand	27	1	-inf
chr9	78327843	78327895	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr1	3521905	3521924	protein_coding	Xkr4	intron	ENSMUSG00000051951	NonProperStrand	5	1	-11.4727
chr4	46508086	46508157	snoRNA	ENSMUSG00000064410_SNORA36	.	ENSMUSG00000064410	ProperStrand	133	chr2	26493366	26493466	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-2.3274
chr5	138046801	138046977	protein_coding	Pcolce	exon	ENSMUSG00000029718	ProperStrand	63	chr2	26768083	26768118	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	1	-8.2959
chr5	120577063	120577079	protein_coding	Rbm19	exon	ENSMUSG00000029594	ProperStrand	40	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-8.0137
chr4	138867205	138867223	protein_coding	Akr7a5	intron	ENSMUSG00000028743	ProperStrand	22	chr2	26493366	26493406	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-5.6800
chr5	116011416	116011441	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	chr11	101271501	101271733	protein_coding	Aarsd1	exon	ENSMUSG00000075528	ProperStrand	30	4	-inf
chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	chr19	8799581	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-1.6454
chr11	48615536	48615614	snoRNA	ENSMUSG00000064725_Snord96a	.	ENSMUSG00000064725	ProperStrand	89	chr4	131908364	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.8981
chr1	183104325	183104389	protein_coding	Wdr26	utr3	ENSMUSG00000038733	ProperStrand	9	chr11	69483136	69483181	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-6.0733
chr11	69483136	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	chr8	34802315	34802415	snoRNA	ENSMUSG00000088856_SNORA48	.	ENSMUSG00000088856	ProperStrand	236	2	-1.1949
chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	chr4	116827793	116827858	snoRNA	ENSMUSG00000064751_SNORD46	.	ENSMUSG00000064751	ProperStrand	132	1	-6.5922
chr7	28366052	28366098	protein_coding	2310022A10Rik	utr3	ENSMUSG00000049643	ProperStrand	10	chr19	8800373	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-7.0560
mmu-miR-6240	4	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr6	143813837	143813853	protein_coding	Sox5	intron	ENSMUSG00000041540	NonProperStrand	49	1	-6.3032
chr2	168704986	168705007	LTR	RLTR25B	ERVK	chr2RLTR25B168704923	NonProperStrand	8	chr4	6008632	6008650	protein_coding	Fam110b	intron	ENSMUSG00000049119	ProperStrand	25	1	-18.7520
chr2	28368859	28368877	protein_coding	Ralgds	utr5	ENSMUSG00000026821	NonProperStrand	60	chr1	89673606	89673696	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	10	-20.7671
chr14	78015188	78015205	protein_coding	Enox1	intron	ENSMUSG00000022012	ProperStrand	16	chr9	120038466	120038549	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.5625
chr10	23505538	23505602	protein_coding	Rps12	intron	ENSMUSG00000061983	ProperStrand	309	chr10	23505561	23505627	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	13	-21.5086
chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	chr13	54848608	54848624	protein_coding	Gprin1	intron	ENSMUSG00000069227	ProperStrand	55	1	-10.7939
chr11	87240292	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	chr10	39978300	39978380	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	9	-19.2357
chr5	118520520	118527593	protein_coding	Fbxw8	exon	ENSMUSG00000032867	ProperStrand	61	chr11	6428121	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.1624
chr7	74876084	74876101	protein_coding	Synm	utr3	ENSMUSG00000030554	ProperStrand	15	chr2	25079687	25080102	protein_coding	Tubb4b	exon	ENSMUSG00000036752	ProperStrand	58	1	-16.2125
chr17	88384123	88384195	protein_coding	Msh6	exon	ENSMUSG00000005370	ProperStrand	150	chr11	69483193	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	4	-4.8223
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr2	170322357	170322374	protein_coding	Pfdn4	intron	ENSMUSG00000052033	ProperStrand	55	1	-6.0749
chr2	22444199	22444596	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	chr17	35299506	35299642	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	7	-6.2914
chr1	71637392	71637464	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr7	16960839	16960859	protein_coding	Sae1	intron	ENSMUSG00000052833	ProperStrand	29	4	-23.1291
chr7	3656304	3656341	protein_coding	Rps9	exon	ENSMUSG00000006333	ProperStrand	87	chr2	4829164	4829180	protein_coding	Sephs1	utr3	ENSMUSG00000026662	NonProperStrand	271	1	-9.5451
chr2	167836656	167836680	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	chrX	149828130	149828146	protein_coding	Klf8	utr3	ENSMUSG00000041649	NonProperStrand	107	1	-10.9706
chr5	135857995	135858011	protein_coding	Pom121	exon	ENSMUSG00000053293	NonProperStrand	94	chr2	130102018	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-4.4904
chr12	107067349	107067366	protein_coding	Papola	exon	ENSMUSG00000021111	NonProperStrand	11	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-8.6121
chr14	102094390	102095167	protein_coding	Uchl3	exon	ENSMUSG00000022111	ProperStrand	12	chr11	74718958	74719010	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	1	-12.3065
chr11	3817611	3817711	protein_coding	Tcn2	utr3	ENSMUSG00000020432	ProperStrand	7	chr14	56159296	56159312	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	1	-15.3805
chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	chr18	75161533	75161598	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	2	-5.0511
chr13	9833567	9833652	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr1	187066900	187066917	snoRNA	ENSMUSG00000077571_Snora36b	.	ENSMUSG00000077571	ProperStrand	244	1	-2.3842
chr11	94153939	94153958	protein_coding	Luc7l3	utr3	ENSMUSG00000020863	NonProperStrand	5	chr18	33954823	33954951	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-8.5187
chr7	31371550	31371634	protein_coding	Wbp7	exon	ENSMUSG00000006307	ProperStrand	180	chr7	118219583	118219673	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-2.2053
chr6	78984284	78984305	LTR	RLTR1B-int	ERV1	chr6RLTR1B-int78984237	ProperStrand	1	chr4	131908353	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-inf
chr11	88153148	88153248	protein_coding	Msi2	utr3	ENSMUSG00000069769	ProperStrand	159	chr9	15118334	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-1.7972
chr8	124337667	124344035	protein_coding	Klhdc4	exon	ENSMUSG00000040263	ProperStrand	13	chr18	35714175	35714255	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-6.4211
chr4	151730301	151730737	protein_coding	Chd5	exon	ENSMUSG00000005045	NonProperStrand	147	chr1	162967489	162967521	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-1.9269
chr17	13069954	13069972	protein_coding	Mrgprh	exon	ENSMUSG00000059408	NonProperStrand	8	chr4	131908356	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-5.0428
chr1	97027906	97027996	LINE	L1Md_F2	L1	chr1L1Md_F297021857	ProperStrand	1	chr5	45358037	45358127	protein_coding	4930431F12Rik	exon	ENSMUSG00000062496	NonProperStrand	3	1	-inf
chr2	133378813	133378830	protein_coding	Bmp2	utr5	ENSMUSG00000027358	NonProperStrand	17	chr16	23111396	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-8.5786
chr4	3330091	3330171	LTR	RLTR1D	ERV1	chr4RLTR1D3329999	NonProperStrand	1	chr1	83986076	83986166	SINE	ID_B1	B4	chr1ID_B183986098	NonProperStrand	1	1	-inf
chr2	90235295	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	5180669	5180685	protein_coding	Znrf3	utr3	ENSMUSG00000041961	NonProperStrand	210	3	-5.9342
chr2	90235299	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	108971290	108971306	protein_coding	Inppl1	utr3	ENSMUSG00000032737	ProperStrand	272	2	-3.2752
chr14	61113419	61113436	LINE	L1MB3	L1	chr14L1MB361113375	NonProperStrand	72	mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	1	-5.5462
chr8	74446729	74446745	protein_coding	Zfp617	intron	ENSMUSG00000066880	NonProperStrand	208	chr4	131865855	131865902	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-1.3511
chr19	6335715	6335741	protein_coding	Men1	exon	ENSMUSG00000024947	ProperStrand	24	chr19	8799859	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-6.7554
chr16	36071984	36072000	protein_coding	Ccdc58	utr5	ENSMUSG00000075229	NonProperStrand	55	chr3	123210872	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.2092
chr10	82874662	82874695	LTR	MURVY-int	ERV1	chr10MURVY-int82873167	NonProperStrand	4	chr5	74489597	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	3	-20.5252
chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	chr14	32990063	32990125	protein_coding	Ncoa4	exon	ENSMUSG00000056234	ProperStrand	15	1	-13.2968
chr1	94919588	94919605	protein_coding	Kif1a	exon	ENSMUSG00000014602	ProperStrand	18	chr5	130300496	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.7422
chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-0.7870
chr16	56035865	56035987	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	chr10	23505152	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	11	-1.3938
chr7	109148483	109148516	protein_coding	Numa1	utr5	ENSMUSG00000066306	ProperStrand	148	chr11	62418014	62418083	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	3	-9.3604
chr2	125331722	125331739	protein_coding	Fbn1	utr5	ENSMUSG00000027204	ProperStrand	38	chr2	158451026	158451043	protein_coding	Actr5	exon	ENSMUSG00000037761	NonProperStrand	94	1	-13.3344
chr7	150717326	150717416	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	chr4	116828389	116828452	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-1.1982
chr7	151033300	151033418	protein_coding	Dhcr7	exon	ENSMUSG00000058454	ProperStrand	30	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	2	-14.5002
chr11	55296168	55296276	protein_coding	G3bp1	intron	ENSMUSG00000018583	ProperStrand	106	chr8	125418803	125418819	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	4	-inf
chr18	38128436	38129075	protein_coding	Fchsd1	exon	ENSMUSG00000038524	ProperStrand	6	chr10	84578964	84579054	protein_coding	AI597468	utr3	ENSMUSG00000060935	ProperStrand	8	1	-18.4474
chrX	91435148	91435177	protein_coding	Eif2s3x	utr3	ENSMUSG00000035150	NonProperStrand	83	chr7	116663713	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-3.5745
chr10	86156736	86156799	protein_coding	Hsp90b1	exon	ENSMUSG00000020048	ProperStrand	396	chr1	162967505	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-1.3040
chr2	38499479	38499495	protein_coding	Psmb7	utr5	ENSMUSG00000026750	NonProperStrand	1	chr2	91773646	91773909	protein_coding	Dgkz	exon	ENSMUSG00000040479	ProperStrand	46	1	-inf
chr7	25288746	25288836	protein_coding	Cadm4	utr3	ENSMUSG00000054793	ProperStrand	6	chr7	116663645	116663725	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-7.0045
mmu-miR-5100	5	20	miRNA	mmu-miR-5100	.	mmu-miR-5100	ProperStrand	132	chr14	65372767	65372870	snoRNA	ENSMUSG00000064442_SNORA36	.	ENSMUSG00000064442	ProperStrand	296	2	-13.5644
chr11	94335392	94335408	protein_coding	Cacna1g	utr5	ENSMUSG00000020866	ProperStrand	35	chr5	23825941	23825957	protein_coding	Kcnh2	exon	ENSMUSG00000038319	ProperStrand	242	1	-11.6050
chr13	95856366	95856384	protein_coding	Pde8b	intron	ENSMUSG00000021684	ProperStrand	43	chr13	100202396	100202416	protein_coding	Mtap1b	exon	ENSMUSG00000052727	ProperStrand	76	1	-13.5141
chr18	36961590	36961662	misc_RNA	Vault	.	ENSMUSG00000065145	ProperStrand	177	chr8	113560965	113564071	protein_coding	Aars	exon	ENSMUSG00000031960	ProperStrand	355	1	-7.5911
chr4	115243472	115243576	protein_coding	Cyp4a31	exon	ENSMUSG00000028712	ProperStrand	61	chr14	56159295	56159312	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	1	-10.9055
chr9	109021473	109021489	protein_coding	Plxnb1	utr3	ENSMUSG00000053646	ProperStrand	25	chr19	8963027	8963083	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.8447
chr6	146366472	146366489	protein_coding	Itpr2	exon	ENSMUSG00000030287	ProperStrand	20	chr10	23505178	23505268	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-7.8391
chr6	125052853	125052962	protein_coding	Chd4	exon	ENSMUSG00000063870	ProperStrand	303	chr11	98878345	98878377	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-3.1993
chr1	162965509	162965599	non_coding	Gas5	.	ENSMUSG00000053332	ProperStrand	144	chr4	122970404	122970484	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-5.6868
chr2	158185529	158185665	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr15	79908931	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	3	-1.0900
chr1	111713367	111713383	LINE	Lx8	L1	chr1Lx8111713333	NonProperStrand	4	chrX	84483703	84483723	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-13.9235
chr5	118376503	118376519	protein_coding	Nos1	exon	ENSMUSG00000029361	NonProperStrand	237	chr10	80644730	80644791	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-3.4729
chr9	78023109	78023150	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr11	116461790	116461969	protein_coding	Rhbdf2	exon	ENSMUSG00000020806	ProperStrand	20	2	-12.9364
chr9	74216487	74216577	LTR	MTD	MaLR	chr9MTD74216455	ProperStrand	1	chr9	74216737	74216817	LTR	RLTR25A	ERVK	chr9RLTR25A74216737	ProperStrand	1	1	-inf
chr14	15572353	15572371	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr19	8799833	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-3.0561
chr2	163879535	163880500	protein_coding	Tomm34	exon	ENSMUSG00000018322	ProperStrand	10	chr16	23110842	23110890	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-5.0079
chr3	94305985	94306105	protein_coding	Snx27	exon	ENSMUSG00000028136	ProperStrand	24	chr1	180267188	180267287	protein_coding	Hnrnpu	exon	ENSMUSG00000039630	ProperStrand	286	1	-12.0382
chr15	79913320	79913342	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr13	51740762	51740779	protein_coding	Cks2	utr5	ENSMUSG00000062248	NonProperStrand	4	1	-9.1208
chr1	181027187	181027205	protein_coding	Smyd3	intron	ENSMUSG00000055067	ProperStrand	231	chr15	82070314	82070353	protein_coding	Cenpm	exon	ENSMUSG00000068101	ProperStrand	6	1	-15.3833
chr6	33448296	33448312	protein_coding	Exoc4	intron	ENSMUSG00000029763	ProperStrand	120	chr17	35089182	35089232	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-4.1528
chr4	70243116	70243196	LINE	Lx6	L1	chr4Lx670242018	NonProperStrand	1	chr4	70243242	70243332	LINE	Lx6	L1	chr4Lx670243163	ProperStrand	1	1	-inf
chrX	71589885	71589907	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr5	74489628	74489676	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-1.1686
chr8	73121836	73121855	protein_coding	Ssbp4	intron	ENSMUSG00000070003	NonProperStrand	8	chr16	23110828	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-5.7082
chrX	10296241	10296291	protein_coding	Mid1ip1	utr3	ENSMUSG00000008035	ProperStrand	27	chr18	35716788	35716883	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	5	-15.4244
chr3	52388277	52388294	SINE	B4A	B4	chr3B4A52388218	ProperStrand	169	chr11	62418008	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	2	-6.0745
chr14	20896094	20896113	protein_coding	1810063B07Rik	utr3	ENSMUSG00000045107	NonProperStrand	5	chr9	120039536	120039577	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-13.6119
chr6	57475070	57475124	protein_coding	Ppm1k	exon	ENSMUSG00000037826	ProperStrand	1	chr9	120038468	120038528	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-inf
chr8	86185023	86185118	protein_coding	Gipc1	exon	ENSMUSG00000019433	ProperStrand	60	chr6	94776857	94776881	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	1	-9.1010
chr7	147326024	147326124	protein_coding	Mtg1	intron	ENSMUSG00000039018	ProperStrand	7	chr11	77995190	77995243	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-10.5781
chr5	136707644	136707662	protein_coding	Sh2b2	exon	ENSMUSG00000005057	NonProperStrand	101	chr9	58471516	58471585	protein_coding	Nptn	exon	ENSMUSG00000032336	ProperStrand	25	1	-14.0410
chr19	24552582	24552600	protein_coding	Pip5k1b	intron	ENSMUSG00000024867	NonProperStrand	40	chr8	116162568	116162638	protein_coding	Mon1b	exon	ENSMUSG00000078908	ProperStrand	12	1	-17.4855
chr1	84736114	84779482	protein_coding	Trip12	exon	ENSMUSG00000026219	ProperStrand	248	chr3	123210853	123210981	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	11	-11.2693
chr11	51457534	51457616	protein_coding	N4bp3	exon	ENSMUSG00000001053	ProperStrand	45	chr13	49779712	49779802	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	4	-20.4783
chr17	36066928	36067008	protein_coding	Ppp1r10	intron	ENSMUSG00000039220	NonProperStrand	6	chr17	36088168	36088258	pseudogene	Gm8801	.	ENSMUSG00000092284	NonProperStrand	4	3	-19.3245
chr16	11392599	11392663	protein_coding	Snx29	intron	ENSMUSG00000079738	ProperStrand	4	chr16	23110457	23110557	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-7.8518
chr11	79058049	79059696	protein_coding	Wsb1	exon	ENSMUSG00000017677	ProperStrand	12	chr15	79913288	79913313	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-6.7458
chr6	83059830	83059847	protein_coding	Mrpl53	utr3	ENSMUSG00000030037	ProperStrand	13	chr4	131908236	131908299	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-6.9302
chr7	25708862	25708952	protein_coding	Arhgef1	exon	ENSMUSG00000040940	ProperStrand	13	chr15	82980133	82980202	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	2	-16.2415
chr8	59990738	59990772	protein_coding	Hmgb2	utr5	ENSMUSG00000054717	ProperStrand	184	chr2	26493404	26493494	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-1.8033
chr1	139186463	139186482	LTR	RMER19C	ERVK	chr1RMER19C139186264	ProperStrand	1	chr2	129998650	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	1	-inf
chr14	12824814	12824830	protein_coding	Ptprg	intron	ENSMUSG00000021745	ProperStrand	72	chr16	90386836	90386853	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	1	-11.8424
chr13	76156115	76156132	protein_coding	Rfesd	utr5	ENSMUSG00000043190	ProperStrand	30	chr11	62418014	62418064	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-6.9303
chr9	65194807	65202425	protein_coding	Pdcd7	exon	ENSMUSG00000041837	ProperStrand	57	chr2	26494708	26494765	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.1996
chr11	60231065	60231086	protein_coding	4933439F18Rik	utr5	ENSMUSG00000018415	ProperStrand	26	chr14	76247736	76247836	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-5.7966
chr16	17842425	17842519	protein_coding	Dgcr2	utr3	ENSMUSG00000003166	ProperStrand	45	chr11	3426352	3426368	protein_coding	Smtn	exon	ENSMUSG00000020439	ProperStrand	222	1	-11.2693
chr2	79843543	79843559	protein_coding	Pde1a	intron	ENSMUSG00000059173	NonProperStrand	275	chr16	23110454	23110518	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-0.9555
chr15	10965488	10965504	protein_coding	Rxfp3	utr3	ENSMUSG00000060735	ProperStrand	37	chr8	73419727	73419775	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.0248
chr16	4920360	4922662	protein_coding	Mgrn1	exon	ENSMUSG00000022517	ProperStrand	14	chr16	23111389	23111469	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-12.7431
chr9	114318253	114318270	protein_coding	Glb1	intron	ENSMUSG00000045594	ProperStrand	67	chr19	8963086	8963181	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-9.9338
chr1	135523575	135523633	protein_coding	Zc3h11a	exon	ENSMUSG00000026464	ProperStrand	102	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-5.9352
chr6	54379743	54379760	lincRNA	9130019P16Rik	exon	ENSMUSG00000073067	ProperStrand	255	chr4	131865853	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-1.5522
chr7	150721856	150721929	protein_coding	Nap1l4	exon	ENSMUSG00000059119	ProperStrand	31	chr1	162966213	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-8.9023
chr9	61761749	61762176	protein_coding	Rplp1	exon	ENSMUSG00000007892	ProperStrand	116	chr14	31827522	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	2	-9.2131
chr8	108687476	108687576	protein_coding	Pla2g15	utr3	ENSMUSG00000031903	ProperStrand	40	chr16	23111769	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.5776
chr5	74489543	74489593	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr4	56910496	56910618	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	4	-1.4481
chr9	55938652	55938671	protein_coding	Pstpip1	intron	ENSMUSG00000032322	ProperStrand	8	chr18	33954827	33954948	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-7.4981
chr11	106362304	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	chr8	73419649	73419776	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	15	-1.0688
chr14	16097931	16097949	SINE	ID_B1	B4	chr14ID_B116097843	NonProperStrand	1	chr3	68889039	68889139	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-inf
chr11	70461398	70461421	protein_coding	Rnf167	exon	ENSMUSG00000040746	ProperStrand	10	chr19	8799599	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-10.4116
chr16	23110988	23111010	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr2	166890502	166890554	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-3.4106
chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	chr2	91436261	91436335	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-3.5341
chr4	34599411	34602085	protein_coding	Rars2	exon	ENSMUSG00000028292	ProperStrand	9	chr5	110660279	110660365	protein_coding	Ankle2	exon	ENSMUSG00000029501	ProperStrand	23	1	-18.4712
chr6	122227243	122227259	protein_coding	Klrg1	intron	ENSMUSG00000030114	ProperStrand	6	chr9	70258058	70258526	protein_coding	Ccnb2	exon	ENSMUSG00000032218	ProperStrand	54	1	-18.0957
chr2	157822752	157822823	protein_coding	Tti1	intron	ENSMUSG00000027650	ProperStrand	17	chr9	110844853	110844902	protein_coding	Tdgf1	exon	ENSMUSG00000032494	ProperStrand	218	1	-13.2888
chr4	87424758	87424805	protein_coding	Mllt3	intron	ENSMUSG00000028496	ProperStrand	2	chr2	163237240	163241313	protein_coding	3230401D17Rik	exon	ENSMUSG00000035399	ProperStrand	5	1	-21.6030
chr3	89812222	89812238	protein_coding	Ubap2l	exon	ENSMUSG00000042520	ProperStrand	88	chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	1	-9.0639
chr5	119205617	119205634	protein_coding	Med13l	exon	ENSMUSG00000018076	NonProperStrand	12	chr18	35716763	35716784	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-5.1577
chr11	78098308	78098985	protein_coding	2610507B11Rik	exon	ENSMUSG00000010277	ProperStrand	246	chr2	32079688	32081785	protein_coding	Prrc2b	exon	ENSMUSG00000039262	ProperStrand	344	1	-7.0016
chr14	22336444	22336544	protein_coding	Myst4	exon	ENSMUSG00000021767	ProperStrand	151	chr19	60866423	60866461	protein_coding	Eif3a	utr5	ENSMUSG00000024991	ProperStrand	287	2	-13.2547
chr2	31312105	31312195	protein_coding	Hmcn2	intron	ENSMUSG00000055632	ProperStrand	20	chr11	69483200	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.4692
chr7	116663712	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	NonProperStrand	51	chr17	24857799	24857843	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	NonProperStrand	27	1	-15.2585
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr17	35114027	35114139	lincRNA	Gm10501	exon	ENSMUSG00000073415	ProperStrand	1	1	-inf
chr2	31471707	31471758	protein_coding	Fubp3	utr3	ENSMUSG00000026843	ProperStrand	35	chr10	23505152	23505207	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.0450
chr2	154171683	154171700	protein_coding	Cdk5rap1	exon	ENSMUSG00000027487	ProperStrand	75	chrX	84483699	84483730	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-7.8032
chr14	80262508	80262524	lincRNA	Gm6999	intron	ENSMUSG00000075495	ProperStrand	265	chr6	124665440	124665523	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	1	-4.0519
chr4	132851116	132851206	protein_coding	Wdtc1	exon	ENSMUSG00000037622	ProperStrand	81	chr4	131865428	131865508	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-3.4448
chr16	20397193	20398967	protein_coding	Abcc5	exon	ENSMUSG00000022822	ProperStrand	30	chr8	83293979	83294059	protein_coding	Gab1	intron	ENSMUSG00000031714	ProperStrand	72	1	-14.3545
chr10	128061660	128062320	protein_coding	Rps26	exon	ENSMUSG00000025362	ProperStrand	67	chr6	97497442	97497522	snoRNA	ENSMUSG00000064724_SNORA63	.	ENSMUSG00000064724	ProperStrand	35	1	-14.1825
chr17	39980028	39980118	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr9	114377732	114377770	protein_coding	Glb1	intron	ENSMUSG00000045594	ProperStrand	67	1	-7.0038
chr19	8798766	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	chr17	71990923	71990999	snoRNA	ENSMUSG00000092713_CT010429.1	.	ENSMUSG00000092713	ProperStrand	182	1	-2.7494
chr10	62228322	62228361	snoRNA	ENSMUSG00000080469_Snord98	.	ENSMUSG00000080469	ProperStrand	124	chr5	74489576	74489676	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-2.4779
chr8	73419656	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	chr13	49779668	49779805	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	17	-6.7803
chrX	34622713	34624038	protein_coding	Rpl39	exon	ENSMUSG00000079641	ProperStrand	37	chr7	116664794	116664874	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.4116
chr2	90235296	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	108204937	108204953	protein_coding	Prkca	exon	ENSMUSG00000050965	ProperStrand	48	2	-8.0897
chr18	73881516	73881534	SINE	B4A	B4	chr18B4A73881466	ProperStrand	1	chr9	15118321	15118368	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-inf
chr3	153575089	153575110	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	chr5	115939520	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	5	-13.8398
chr14	49693428	49693479	protein_coding	Mudeng	exon	ENSMUSG00000036291	ProperStrand	4	chr5	130300431	130300521	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-7.9077
chr6	67141436	67141526	SINE	B1F1	Alu	chr6B1F167141384	NonProperStrand	1	chr6	67141241	67141321	SINE	B4	B4	chr6B467141239	NonProperStrand	1	1	-inf
chr5	35133301	35133346	protein_coding	Htt	intron	ENSMUSG00000029104	ProperStrand	73	chr19	8799831	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	5	-18.0235
chr12	77390677	77390767	protein_coding	Mthfd1	exon	ENSMUSG00000021048	ProperStrand	71	chr9	120039533	120039613	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.0149
chr3	145593168	145593185	protein_coding	Bcl10	intron	ENSMUSG00000028191	ProperStrand	14	chr14	33005094	33005139	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-6.8567
chr18	66143913	66147451	protein_coding	Lman1	exon	ENSMUSG00000041891	ProperStrand	36	chr15	101923558	101923597	protein_coding	Eif4b	exon	ENSMUSG00000058655	ProperStrand	484	1	-10.1626
chr2	151385350	151386440	protein_coding	Fkbp1a	utr3	ENSMUSG00000032966	ProperStrand	36	chr17	24857717	24857797	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.1916
chr11	94154301	94158469	protein_coding	Luc7l3	utr3	ENSMUSG00000020863	ProperStrand	38	chr10	23505152	23505253	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	6	-12.3039
chr9	63868722	63868739	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	chr4	56910550	56910617	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	2	-3.2736
chr17	8593808	8593884	processed_transcript	T2	.	ENSMUSG00000058159	ProperStrand	11	chr4	131865913	131865980	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.8470
chr3	104597138	104597238	protein_coding	Rhoc	utr3	ENSMUSG00000002233	ProperStrand	41	chr7	52382237	52382272	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-9.0481
chr12	32244262	32244278	protein_coding	Slc26a4	utr5	ENSMUSG00000020651	NonProperStrand	4	chr11	68886990	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	3	-22.9600
chrX	140804136	140804226	protein_coding-noncoding	Alg13	utr3	ENSMUSG00000041718	ProperStrand	87	chr7	117189864	117189944	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-5.4804
chr2	90235315	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	138964709	138964727	protein_coding	Fgfr2	intron	ENSMUSG00000030849	ProperStrand	100	1	-3.5047
chr1	94749491	94749581	protein_coding	Gpc1	intron	ENSMUSG00000034220	ProperStrand	30	chr4	131908300	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	8	-inf
chr4	125390711	125390736	protein_coding	Grik3	utr3	ENSMUSG00000001985	ProperStrand	126	chr5	111121066	111121148	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	2	-8.2104
chr11	68849057	68849147	protein_coding	1500010J02Rik	exon	ENSMUSG00000020898	ProperStrand	38	chr4	131865855	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.5179
chr12	34742879	34742959	protein_coding	Hdac9	intron	ENSMUSG00000004698	ProperStrand	41	chr7	54442387	54442477	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-10.4965
chr11	98547251	98547287	protein_coding	Psmd3	exon	ENSMUSG00000017221	ProperStrand	51	chr12	17552948	17553029	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-5.4057
chr14	35369417	35369436	protein_coding	Ldb3	intron	ENSMUSG00000021798	NonProperStrand	1	chr17	35299547	35299637	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-inf
chr6	85416662	85416691	protein_coding	Cct7	exon	ENSMUSG00000030007	ProperStrand	173	chr17	35087894	35087948	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-3.2066
chr17	39985546	39985588	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr10	92915719	92915795	tRNA	tRNA851-AspGTC	.	137874	ProperStrand	6	4	-19.9972
chr9	20831949	20832039	protein_coding	Icam1	exon	ENSMUSG00000037405	ProperStrand	44	chr4	131865868	131865948	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.2687
chr18	10052130	10052151	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr12	86464735	86464804	protein_coding	Dlst	exon	ENSMUSG00000004789	ProperStrand	52	1	-9.0882
chr11	102553635	102553715	protein_coding	Ccdc43	intron	ENSMUSG00000020925	NonProperStrand	1	chr2	126683117	126683207	protein_coding	Trpm7	intron	ENSMUSG00000027365	NonProperStrand	4	1	-inf
chr1	71657543	71659043	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr7	117166757	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	2	-1.0649
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr19	8799023	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	2	-3.9150
chr9	108110891	108110981	protein_coding	Dag1	exon	ENSMUSG00000039952	ProperStrand	54	chr7	116664819	116664899	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.7317
chr4	117884837	117884961	protein_coding	Ptprf	exon	ENSMUSG00000033295	ProperStrand	337	chr1	168239525	168239541	protein_coding	Ildr2	exon	ENSMUSG00000040612	ProperStrand	103	1	-8.7727
chr15	36529153	36529229	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr16	23109044	23109093	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-2.1795
chr10	111225807	111225825	SINE	B4	B4	chr10B4111225550	NonProperStrand	1	chr14	33005052	33005091	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-inf
chr2	26493366	26493483	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr19	8799019	8799092	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	19	-5.5322
chr16	13723508	13723544	protein_coding	Pla2g10	intron	ENSMUSG00000022683	ProperStrand	6	chr19	44247506	44247522	protein_coding	Pkd2l1	intron	ENSMUSG00000037578	NonProperStrand	5	1	-19.0115
chr19	6298399	6298452	protein_coding	Ehd1	exon	ENSMUSG00000024772	ProperStrand	30	chr4	135568811	135568873	protein_coding	Tceb3	exon	ENSMUSG00000028668	ProperStrand	17	6	-20.0024
chr2	153227104	153227175	protein_coding	Asxl1	exon	ENSMUSG00000042548	ProperStrand	76	chr11	97642955	97643045	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.0775
chr14	80262508	80262524	lincRNA	Gm6999	intron	ENSMUSG00000075495	ProperStrand	265	chr7	116084274	116084446	protein_coding	Eif3f	exon	ENSMUSG00000031029	ProperStrand	69	1	-10.0548
chr14	60908433	60908491	protein_coding	Mtmr6	exon	ENSMUSG00000021987	ProperStrand	7	chr19	8963086	8963164	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-6.3961
chr16	96697758	96697776	protein_coding	Igsf5	intron	ENSMUSG00000000159	NonProperStrand	1	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-inf
chr18	24363855	24363872	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr13	68759738	68764669	protein_coding	Adcy2	exon	ENSMUSG00000021536	ProperStrand	237	1	-8.6198
chr3	129341079	129341162	protein_coding	Elovl6	utr3	ENSMUSG00000041220	ProperStrand	59	chr11	6428035	6428125	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.2227
chr17	7504708	7504724	protein_coding	Rps6ka2	utr3	ENSMUSG00000023809	NonProperStrand	18	chr11	106362568	106362635	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-9.8361
chr1	87745695	87745795	protein_coding	Cab39	exon	ENSMUSG00000036707	ProperStrand	45	chr10	23505152	23505209	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.6487
chr7	30026273	30026289	protein_coding	Yif1b	intron	ENSMUSG00000030588	ProperStrand	154	chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-4.6184
chr17	13112531	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	chr9	15118518	15118573	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	2	-2.3053
chr7	63485139	63485203	protein_coding	Herc2	exon	ENSMUSG00000030451	ProperStrand	66	chr10	62228322	62228394	snoRNA	ENSMUSG00000080469_Snord98	.	ENSMUSG00000080469	ProperStrand	124	1	-11.6641
chr6	71926167	71926213	protein_coding	Polr1a	exon	ENSMUSG00000049553	ProperStrand	109	chr5	115939506	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-6.6790
chr2	118587121	118587385	protein_coding	A430105I19Rik	exon	ENSMUSG00000045838	ProperStrand	37	chr4	131865867	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.5639
chr13	9833569	9833658	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr9	40609362	40610954	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	2	-1.4626
chr7	88529496	88529520	protein_coding	Cpeb1	intron	ENSMUSG00000025586	NonProperStrand	29	chr1	71644987	71645013	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	1	-9.2957
chr11	117729369	117729386	protein_coding	Tha1	utr3	ENSMUSG00000017713	NonProperStrand	56	chr4	129305896	129305996	protein_coding	Txlna	utr3	ENSMUSG00000053841	ProperStrand	37	1	-14.4294
chr7	137903508	137907826	protein_coding	Tacc2	exon	ENSMUSG00000030852	ProperStrand	95	chr1	162967515	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-2.6527
chr2	158632157	158632679	protein_coding	Dhx35	exon	ENSMUSG00000027655	ProperStrand	37	chr4	131865857	131865937	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.5639
chr9	65986166	65986252	protein_coding	Fam96a	utr3	ENSMUSG00000032381	ProperStrand	3	chr9	15119736	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-8.7352
chr2	90235315	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	22796153	22796225	protein_coding	Abi1	utr3	ENSMUSG00000058835	ProperStrand	24	1	-6.2570
chr19	16036872	16043562	protein_coding	Cep78	exon	ENSMUSG00000041491	ProperStrand	8	chr3	84935851	84935868	protein_coding	Arfip1	intron	ENSMUSG00000074513	ProperStrand	49	1	-17.9732
chr9	70616666	70616689	protein_coding	Adam10	exon	ENSMUSG00000054693	ProperStrand	12	chr8	32260335	32260424	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-7.8408
chr2	164256170	164256270	protein_coding	Sdc4	intron	ENSMUSG00000017009	ProperStrand	177	chr17	24857725	24857794	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-0.7559
chr16	97832671	97832687	protein_coding	Tmprss2	utr5	ENSMUSG00000000385	ProperStrand	5	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-14.0925
chr15	82003262	82005559	protein_coding	Srebf2	exon	ENSMUSG00000022463	ProperStrand	592	chr5	130295531	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-1.2559
chr11	78008586	78008604	protein_coding	Proca1	intron	ENSMUSG00000044122	ProperStrand	5	chr8	85387730	85387748	protein_coding	Rnf150	exon	ENSMUSG00000047747	NonProperStrand	4	1	-20.9004
chr17	34251304	34251341	protein_coding	Brd2	exon	ENSMUSG00000024335	ProperStrand	69	chr4	131908236	131908286	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.2232
chr3	108228259	108228275	protein_coding	Sars	utr3	ENSMUSG00000068739	NonProperStrand	200	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.3055
chr11	97898112	97898203	protein_coding	Stac2	utr3	ENSMUSG00000017400	ProperStrand	10	chr16	23110455	23110526	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.8693
chr12	39852799	39852879	LINE	L1Md_F2	L1	chr12L1Md_F239852308	NonProperStrand	1	chr1	12658139	12658229	lincRNA	Gm17644	exon	ENSMUSG00000066918	ProperStrand	10	1	-inf
chr7	116663136	116663485	protein_coding	Rpl27a	exon	ENSMUSG00000046364	ProperStrand	149	chr7	56848577	56848667	protein_coding	Nav2	intron	ENSMUSG00000052512	ProperStrand	106	1	-10.3446
chr5	115595249	115595296	protein_coding	Mlec	utr3	ENSMUSG00000048578	ProperStrand	47	chr9	15118332	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.9207
chr17	34747537	34747555	protein_coding	Agpat1	exon	ENSMUSG00000034254	NonProperStrand	39	chr8	73419657	73419725	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.9253
chr10	86159566	86161120	protein_coding	Hsp90b1	exon	ENSMUSG00000020048	ProperStrand	396	chr19	8798524	8798550	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	5	-9.1963
chr10	70914470	70914560	LTR	MER34A1	ERV1	chr10MER34A170914340	ProperStrand	1	chr10	70914068	70914158	LTR	RLTR28	ERVL	chr10RLTR2870913889	NonProperStrand	1	1	-inf
chr4	131826037	131826127	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	chr5	108334195	108334265	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-1.2845
chr15	35347326	35352074	protein_coding	Vps13b	utr5	ENSMUSG00000037646	ProperStrand	56	chr7	116663642	116663732	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.6307
chr15	82725605	82725636	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	chr4	154299322	154299416	protein_coding	Tnfrsf14	intron	ENSMUSG00000042333	ProperStrand	1	1	-inf
chr2	146863973	146866601	protein_coding	Xrn2	exon	ENSMUSG00000027433	ProperStrand	48	chr16	23110491	23110526	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.8496
chr2	90858299	90858335	protein_coding	Celf1	utr3	ENSMUSG00000005506	ProperStrand	61	chr5	122019036	122020655	protein_coding	Aldh2	exon	ENSMUSG00000029455	ProperStrand	108	2	-18.2432
chr3	108189279	108189461	protein_coding	Psrc1	exon	ENSMUSG00000068744	ProperStrand	38	chr4	131865856	131865936	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.5179
chr1	46085828	46085848	protein_coding	Gm4776	exon	ENSMUSG00000044457	ProperStrand	4	chr15	98350143	98350182	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	3	-19.7523
chr9	78023195	78023246	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	1	-2.6252
chr19	44369421	44369454	protein_coding	Scd2	exon	ENSMUSG00000025203	ProperStrand	219	chr11	75386138	75386238	protein_coding	Slc43a2	utr3	ENSMUSG00000038178	ProperStrand	45	1	-11.2966
chr12	17554107	17554133	protein_coding	Odc1	exon	ENSMUSG00000011179	ProperStrand	173	chr5	130295445	130295535	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-3.2516
chr5	77395973	77395993	protein_coding	Paics	utr3	ENSMUSG00000029247	ProperStrand	78	chr14	21511629	21511674	protein_coding	Sec24c	exon	ENSMUSG00000039367	ProperStrand	60	1	-12.7871
chr19	6277159	6277259	protein_coding	Ehd1	exon	ENSMUSG00000024772	ProperStrand	30	chr16	56035920	56035987	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	6	-19.7571
chr5	54389948	54389964	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	chr2	29014439	29014455	protein_coding	Setx	exon	ENSMUSG00000043535	ProperStrand	187	1	-8.5060
chr2	73434618	73434634	antisense	Gm13704	.	ENSMUSG00000086544	NonProperStrand	53	chrX	34622968	34623025	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-3.3968
chr2	158184107	158184197	snoRNA	ENSMUSG00000064995_SNORA71	.	ENSMUSG00000064995	ProperStrand	430	chr4	131865379	131865464	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-0.8339
chr18	63238393	63238409	protein_coding	Fam38b	exon	ENSMUSG00000041482	ProperStrand	4	chrX	34622906	34623024	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	NonProperStrand	26	1	-19.1369
chr11	68804027	68804224	protein_coding	Pfas	exon	ENSMUSG00000020899	ProperStrand	53	chr9	15119703	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.8468
chr11	101466253	101466351	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	chr5	108336363	108336492	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	3	-3.4154
chr6	125113026	125113226	protein_coding	Gapdh	exon	ENSMUSG00000057666	ProperStrand	356	chr17	35088957	35088996	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-2.5426
chr9	70833943	70834023	LTR	MTD	MaLR	chr9MTD70833879	ProperStrand	1	chr9	70833338	70833428	LTR	ORR1A4	MaLR	chr9ORR1A470833208	NonProperStrand	1	1	-inf
chr10	41644311	41644329	protein_coding	Armc2	exon	ENSMUSG00000071324	ProperStrand	281	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-2.9539
chr2	90235306	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	91589954	91589972	LTR	RLTR42	ERVK	chr8RLTR4291589786	NonProperStrand	1	1	-inf
mmu-miR-690	0	18	miRNA	mmu-miR-690	.	mmu-miR-690	ProperStrand	63	chr15	82980086	82980192	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-7.0422
chr10	10337708	10337798	LINE	Lx2	L1	chr10Lx210337300	NonProperStrand	1	chr1	109522850	109522930	LINE	L1_Mus3	L1	chr1L1_Mus3109522489	NonProperStrand	1	1	-inf
chr12	110888844	110888911	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr4	109608109	109608209	protein_coding	Faf1	exon	ENSMUSG00000010517	ProperStrand	29	1	-10.1324
chr16	8619528	8619545	protein_coding	Gm9851	utr3	ENSMUSG00000051226	ProperStrand	2	chr7	52382237	52382314	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-15.7512
chr3	116126898	116126914	protein_coding	Cdc14a	utr5	ENSMUSG00000033502	ProperStrand	29	chr2	26494763	26494829	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.4659
chr7	12311084	12311174	LINE	Lx5	L1	chr7Lx512310905	ProperStrand	1	chr7	12310716	12310806	LTR	RMER13B	ERVK	chr7RMER13B12309939	NonProperStrand	1	1	-inf
chr7	117189863	117189920	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr12	17552965	17553055	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	6	-2.1039
chr10	127485337	127485388	protein_coding	Naca	exon	ENSMUSG00000061315	ProperStrand	50	chr7	116664811	116664901	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.8672
chr2	103615795	103615819	protein_coding	Caprin1	exon	ENSMUSG00000027184	ProperStrand	145	chr13	104533726	104533743	protein_coding	Srek1	exon	ENSMUSG00000032621	ProperStrand	41	1	-12.3108
chr2	24915691	24915707	protein_coding	Nelf	exon	ENSMUSG00000006476	ProperStrand	40	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-9.7425
chr2	130534689	130534733	protein_coding	4930402H24Rik	utr3	ENSMUSG00000027309	ProperStrand	16	chr14	96988144	96988179	snoRNA	ENSMUSG00000064581_SNORA30	.	ENSMUSG00000064581	ProperStrand	146	1	-14.2204
chr4	140551528	140552218	protein_coding	Atp13a2	exon	ENSMUSG00000036622	ProperStrand	39	chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	1	-11.4874
chr8	72817928	72818596	protein_coding	Ddx49	exon	ENSMUSG00000057788	ProperStrand	68	chr2	158185530	158185587	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	2	-10.1169
chr4	132054869	132054887	protein_coding	Sesn2	exon	ENSMUSG00000028893	NonProperStrand	4	chr16	23110456	23110556	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-7.8518
chr15	77597977	77597993	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr2	132632867	132632900	protein_coding	Trmt6	intron	ENSMUSG00000037376	ProperStrand	2	1	-16.3552
chr1	183289111	183289128	protein_coding	Cnih3	intron	ENSMUSG00000026514	NonProperStrand	32	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-10.6373
chr17	25703019	25703036	protein_coding	Sox8	utr3	ENSMUSG00000024176	ProperStrand	1	chr6	65819202	65820348	protein_coding	Prdm5	exon	ENSMUSG00000029913	ProperStrand	50	1	-inf
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	136800631	136800649	SINE	RSINE1	B4	chr7RSINE1136800606	ProperStrand	216	4	-8.0238
chr19	4201122	4201138	protein_coding	Rad9	intron	ENSMUSG00000024824	NonProperStrand	12	chr7	26148466	26148500	protein_coding	Megf8	exon	ENSMUSG00000045039	ProperStrand	100	1	-15.5814
chr9	78023184	78023247	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr10	53064299	53064316	protein_coding	Gm9766	intron	ENSMUSG00000038594	ProperStrand	3	2	-20.3180
chr9	15119279	15119342	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	chr19	8799030	8799091	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-2.4787
chr16	90777663	90777699	protein_coding	Urb1	exon	ENSMUSG00000039929	ProperStrand	71	chr10	39978350	39978440	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-5.1318
chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	chr4	155366536	155366553	protein_coding	B3galt6	exon	ENSMUSG00000050796	ProperStrand	40	1	-11.0938
chr2	131004858	131004945	protein_coding	Cenpb	exon	ENSMUSG00000068267	ProperStrand	26	chr16	23111754	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.3497
chrX	7644437	7644453	antisense	Gm14820	.	ENSMUSG00000087193	ProperStrand	1	mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	1	-inf
chr3	125574624	125574640	protein_coding	Ugt8a	exon	ENSMUSG00000032854	ProperStrand	16	chr5	130295414	130295471	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-7.8876
chr16	94443114	94443214	protein_coding	Hlcs	intron	ENSMUSG00000040820	ProperStrand	22	chr4	131865943	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.5019
chr4	34522305	34522405	protein_coding	Orc3	exon	ENSMUSG00000040044	ProperStrand	10	chr15	34370545	34370603	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-7.0767
chr11	56932234	56932250	protein_coding	Gria1	intron	ENSMUSG00000020524	NonProperStrand	9	chr5	121655100	121655144	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-7.5103
chr2	167836657	167836685	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	chr11	69483136	69483282	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-2.8310
chr7	133939222	133939471	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	chr9	120037918	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	2	-1.4099
chr2	179322378	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr15	79913288	79913321	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-1.7906
chr7	148656044	148656238	protein_coding	Cd151	exon	ENSMUSG00000025510	ProperStrand	2	chr16	23110550	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-9.6327
chr2	90235315	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	25656321	25656338	protein_coding	Ido2	intron	ENSMUSG00000031549	NonProperStrand	29	1	-5.8800
chr17	45705404	45705458	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr2	120872244	120872260	protein_coding	Tgm5	exon	ENSMUSG00000053675	NonProperStrand	163	1	-4.7774
chr16	23039851	23039870	LTR	MTD	MaLR	chr16MTD23039751	ProperStrand	1	chr4	131865859	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr1	138523058	138523119	protein_coding	Zfp281	exon	ENSMUSG00000041483	ProperStrand	18	chr16	23111443	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.2408
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr19	53082307	53082324	protein_coding	Xpnpep1	intron	ENSMUSG00000025027	NonProperStrand	58	1	-5.9703
chr15	77597977	77597993	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr3	97817679	97851652	protein_coding	Notch2	exon	ENSMUSG00000027878	ProperStrand	86	1	-8.0878
chr15	79654442	79654459	protein_coding	Cbx6	utr3	ENSMUSG00000089715	NonProperStrand	11	chr2	26768053	26768119	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	3	-19.8065
chr19	46143825	46143866	protein_coding	Pprc1	exon	ENSMUSG00000055491	ProperStrand	143	chr1	162968481	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-4.3960
chr7	134671420	134671510	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	chr2	130102021	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-0.7861
chr9	120038496	120038529	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	chr17	71980620	71980679	snoRNA	ENSMUSG00000093289_Snord92	.	ENSMUSG00000093289	ProperStrand	56	1	-3.1631
chr17	23806449	23806465	protein_coding-noncoding	Thoc6	utr3	ENSMUSG00000041319	NonProperStrand	6	chr3	88341018	88341089	protein_coding	Mex3a	exon	ENSMUSG00000074480	ProperStrand	7	1	-19.6825
chr15	12802770	12802870	protein_coding	Drosha	intron	ENSMUSG00000022191	ProperStrand	163	chr8	42006052	42006068	protein_coding	Slc7a2	utr3	ENSMUSG00000031596	ProperStrand	10	1	-14.9645
chr5	53133023	53133039	protein_coding	Pi4k2b	exon	ENSMUSG00000029186	NonProperStrand	2	chr7	116664869	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-9.7350
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr16	44087334	44087378	protein_coding	Atp6v1a	utr3	ENSMUSG00000052459	ProperStrand	79	1	-7.7663
chr1	98851133	98851223	processed_transcript	Slco6b1	.	ENSMUSG00000045463	NonProperStrand	2	chr2	54441138	54441218	protein_coding	Galnt13	intron	ENSMUSG00000060988	NonProperStrand	9	1	-inf
chr9	62189226	62189279	protein_coding	Anp32a	utr5	ENSMUSG00000032249	ProperStrand	75	chr17	24857763	24857853	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.9322
chr7	30026273	30026289	protein_coding	Yif1b	intron	ENSMUSG00000030588	ProperStrand	154	chr11	106362638	106362692	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-5.5459
chr5	130458032	130458083	protein_coding	Vkorc1l1	exon	ENSMUSG00000066735	ProperStrand	8	chr19	8963027	8963106	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-6.1145
chr17	24665476	24665565	antisense	2610019E17Rik	.	ENSMUSG00000093565	ProperStrand	24	chr8	73055488	73055578	protein_coding	Fkbp8	exon	ENSMUSG00000019428	ProperStrand	52	1	-15.4532
chr7	16866226	16867734	protein_coding	Ccdc9	exon	ENSMUSG00000041375	ProperStrand	14	chr16	23110911	23110956	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.2008
chr8	127400934	127401352	protein_coding	Gnpat	exon	ENSMUSG00000031985	ProperStrand	20	chr5	130295414	130295498	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-7.4328
chr16	23111386	23111482	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	chr12	110892838	110892905	snoRNA	ENSMUSG00000064621_AF357355	.	ENSMUSG00000064621	ProperStrand	60	2	-2.4225
chr17	39979943	39980013	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr8	87525135	87525238	protein_coding	Hook2	exon	ENSMUSG00000052566	ProperStrand	204	1	-4.8257
chrX	11635848	11635865	protein_coding	Bcor	exon	ENSMUSG00000040363	NonProperStrand	293	chr1	59761635	59761716	snoRNA	ENSMUSG00000089093_Snord11	.	ENSMUSG00000089093	ProperStrand	193	1	-7.7999
chr11	58682475	58682491	protein_coding	2810021J22Rik	utr5	ENSMUSG00000020491	ProperStrand	162	chr15	34370617	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-1.8382
chr12	86019538	86019555	protein_coding	Tmem90a	utr3	ENSMUSG00000071234	ProperStrand	13	chr9	120038613	120038678	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-9.8315
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	93278845	93278863	protein_coding	Cd82	intron	ENSMUSG00000027215	ProperStrand	2	1	-11.8388
chr10	10055839	10055855	protein_coding	9130014G24Rik	exon	ENSMUSG00000050994	ProperStrand	17	chr15	79913298	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-6.0370
chr15	102038137	102038182	protein_coding-noncoding	Zfp740	utr5	ENSMUSG00000046897	ProperStrand	1	chr15	7109223	7109240	protein_coding	Lifr	intron	ENSMUSG00000054263	NonProperStrand	14	1	-inf
chr2	165677627	165710110	protein_coding	Zmynd8	utr5	ENSMUSG00000039671	ProperStrand	81	chr1	162965530	162965573	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	8	-20.0336
chr11	51419899	51419989	protein_coding	Hnrnpab	exon	ENSMUSG00000020358	ProperStrand	124	chr16	23111777	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-0.8854
chr11	97699934	97699962	protein_coding	Lasp1	utr3	ENSMUSG00000038366	ProperStrand	65	chr11	97642952	97642971	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.3361
chr7	30074414	30074430	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr4	41673405	41673421	protein_coding	Il11ra1	intron	ENSMUSG00000073889	ProperStrand	128	1	-8.9098
chr11	69391916	69391965	protein_coding	Wrap53	intron	ENSMUSG00000041346	ProperStrand	14	chr8	73033511	73034257	protein_coding	2810422J05Rik	exon	ENSMUSG00000055553	ProperStrand	171	1	-14.1765
chr9	15130770	15130825	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	chr7	52382752	52382777	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	2	-4.9542
chr2	129998657	129998715	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr7	114886563	114886579	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	1	-3.7508
chr8	122466497	122466597	protein_coding	Usp10	intron	ENSMUSG00000031826	ProperStrand	98	chr19	8799855	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	4	-12.9919
chr8	95364343	95364359	protein_coding	Mmp2	exon	ENSMUSG00000031740	NonProperStrand	2	chr10	116498357	116498396	protein_coding	Cct2	exon	ENSMUSG00000034024	ProperStrand	100	1	-inf
chr19	15992752	15992842	protein_coding	Psat1	exon	ENSMUSG00000024640	ProperStrand	33	chr10	110918548	110918628	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-4.5763
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr19	24205482	24205548	protein_coding	Tjp2	exon	ENSMUSG00000024812	ProperStrand	63	1	-8.5079
chr11	85002453	85002502	protein_coding	Appbp2	utr3	ENSMUSG00000018481	ProperStrand	15	chr5	116071701	116071718	protein_coding	Gcn1l1	exon	ENSMUSG00000041638	ProperStrand	408	1	-12.2915
chr4	65275366	65275456	protein_coding	Trim32	exon	ENSMUSG00000051675	ProperStrand	42	chr4	131908358	131908438	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.9630
chr14	51427119	51427219	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr11	62590610	62590631	protein_coding	Zfp286	intron	ENSMUSG00000047342	NonProperStrand	11	1	-10.6591
chr8	72287172	72287188	protein_coding	Zfp866	utr3	ENSMUSG00000043090	NonProperStrand	134	chr7	150717298	150717367	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	4	-12.8564
chr8	72636697	72636763	protein_coding	Ncan	exon	ENSMUSG00000002341	ProperStrand	8	chr11	11867679	11870432	protein_coding	Grb10	exon	ENSMUSG00000020176	NonProperStrand	159	1	-15.4782
chr16	44140100	44140143	protein_coding	Naa50	utr5	ENSMUSG00000022698	ProperStrand	56	chr8	32260410	32260427	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-4.7627
chr11	48620969	48621059	protein_coding	Trim41	exon	ENSMUSG00000040365	ProperStrand	11	chr16	23111374	23111454	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.1830
chr7	108980813	108980992	protein_coding	Inppl1	exon	ENSMUSG00000032737	ProperStrand	272	chr1	88247743	88247799	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	2	-4.1219
chr17	51877561	51877577	protein_coding	Satb1	utr3	ENSMUSG00000023927	ProperStrand	62	chr5	108336376	108336505	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	3	-11.4222
chr2	31924012	31924028	protein_coding	Fam78a	utr3	ENSMUSG00000050592	NonProperStrand	340	chr19	8799829	8799892	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-1.8395
chr16	14405203	14410847	protein_coding	Abcc1	exon	ENSMUSG00000023088	ProperStrand	35	chr7	117166751	117166831	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-5.8692
chr4	128997416	128997447	protein_coding	Rbbp4	intron	ENSMUSG00000057236	ProperStrand	22	chrX	34622961	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	4	-16.0073
chr1	36583300	36583349	protein_coding	Cnnm3	utr3	ENSMUSG00000001138	ProperStrand	58	chr2	26494708	26494808	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.1681
chr4	53873600	53873647	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	chr9	15118271	15118371	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-0.8927
chr13	17790211	17790291	protein_coding	2810021B07Rik	utr3	ENSMUSG00000012429	ProperStrand	3	chr1	159454476	159454566	protein_coding	Sec16b	intron	ENSMUSG00000026589	ProperStrand	6	1	-inf
chr7	28526887	28526987	protein_coding-noncoding	Zfp60	utr5	ENSMUSG00000037640	ProperStrand	8	chr7	28524210	28524268	protein_coding	Zfp60	intron	ENSMUSG00000037640	ProperStrand	14	8	-inf
chr2	26493390	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr14	17253250	17253267	protein_coding	Top2b	exon	ENSMUSG00000017485	ProperStrand	24	1	-8.0267
chr10	41994730	41994830	protein_coding	Foxo3	exon	ENSMUSG00000048756	ProperStrand	59	chr17	35087895	35087936	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-5.2328
chr4	45543431	45543448	protein_coding	Shb	utr5	ENSMUSG00000044813	ProperStrand	32	chr10	23505152	23505236	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.1928
chr8	48973728	48973744	protein_coding	Wwc2	intron	ENSMUSG00000031563	NonProperStrand	56	chr4	116826700	116826766	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-6.9185
chr8	3454893	3454973	protein_coding	Arhgef18	utr3	ENSMUSG00000004568	ProperStrand	26	chr16	56035865	56035955	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	1	-10.6339
chr1	34217525	34217541	protein_coding	Dst	exon	ENSMUSG00000026131	ProperStrand	461	chr4	134770934	134770950	protein_coding	Clic4	utr3	ENSMUSG00000037242	NonProperStrand	5	1	-14.3917
chr17	45705304	45705362	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr4	116827121	116827149	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-1.1295
chr7	123308001	123314221	protein_coding	Plekha7	exon	ENSMUSG00000045659	ProperStrand	66	chr17	24857816	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.1388
chr15	98604924	98606960	protein_coding	Wnt10b	exon	ENSMUSG00000022996	NonProperStrand	189	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-4.9528
chr7	86844156	86844341	protein_coding	Kif7	exon	ENSMUSG00000050382	ProperStrand	12	chr4	131908753	131908795	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.9639
chr6	50299740	50299757	protein_coding	Osbpl3	intron	ENSMUSG00000029822	ProperStrand	34	chr6	148817692	148817739	protein_coding	Caprin2	exon	ENSMUSG00000030309	ProperStrand	12	1	-17.5675
chr4	126703409	126703426	protein_coding	Sfpq	exon	ENSMUSG00000028820	ProperStrand	340	chr1	88247814	88247835	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-1.9623
chr18	73693108	73693138	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr3	95980314	95980410	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	6	-4.5520
chr10	67349000	67349064	protein_coding	Zfp365	utr3	ENSMUSG00000037855	ProperStrand	9	chr10	23505160	23505250	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.5477
chr2	158182156	158182179	lincRNA	9430008C03Rik	intron	ENSMUSG00000085385	ProperStrand	1039	chr12	71060428	71060531	protein_coding	Atl1	intron	ENSMUSG00000021066	ProperStrand	10	3	-19.1601
chr4	122970425	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	chr1	162965979	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	10	-4.4498
chr5	53174367	53174386	protein_coding	Zcchc4	exon	ENSMUSG00000029179	ProperStrand	15	chr16	23110827	23110851	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.0842
chr6	114260511	114260527	protein_coding	Slc6a1	exon	ENSMUSG00000030310	NonProperStrand	147	chr2	91436310	91436336	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-5.7278
chr11	79437899	79437966	protein_coding	Rab11fip4	intron	ENSMUSG00000017639	ProperStrand	30	chr2	166859149	166859241	protein_coding	Ddx27	exon	ENSMUSG00000017999	ProperStrand	55	1	-14.8952
chr9	20733886	20733940	protein_coding	Dnmt1	intron	ENSMUSG00000004099	ProperStrand	91	chr10	23505152	23505209	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-0.7221
chr18	62695781	62695829	protein_coding	Fbxo38	exon	ENSMUSG00000042211	ProperStrand	18	chr1	162967540	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-5.7965
chr19	29545309	29545326	protein_coding	Pdcd1lg2	utr3	ENSMUSG00000016498	NonProperStrand	2	chr19	42194678	42194694	protein_coding	Pi4k2a	utr3	ENSMUSG00000025178	ProperStrand	23	1	-20.4378
chr5	115939497	115939615	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr9	120039565	120039656	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	36	-19.3844
chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	chr11	116704529	116704556	protein_coding	Jmjd6	utr5	ENSMUSG00000056962	ProperStrand	92	2	-14.2947
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	64785559	64785575	protein_coding	Pappa	utr5	ENSMUSG00000028370	ProperStrand	65	1	-4.3101
chr8	87194937	87195010	protein_coding	Nacc1	utr3	ENSMUSG00000001910	ProperStrand	130	chr11	68886928	68887018	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-2.7333
chr2	89368462	89368478	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	chr15	5068428	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-3.2611
chr5	24210699	24210752	protein_coding	Nub1	intron	ENSMUSG00000028954	ProperStrand	32	chr7	116663633	116663714	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-6.1987
chr1	39902173	39902514	LINE	L2b	L2	chr1L2b39902159	NonProperStrand	28	chr11	102294588	102294607	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	1	-10.4315
chr8	125202944	125202961	protein_coding	Cbfa2t3	intron	ENSMUSG00000006362	ProperStrand	41	chr1	162967513	162967547	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.1870
chr16	56035919	56035990	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	chr11	62417002	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	3	-5.5315
chr11	55220074	55220754	protein_coding	Sparc	exon	ENSMUSG00000018593	ProperStrand	48	chr5	92485086	92485147	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	5	-20.1074
chr5	115534861	115534936	protein_coding	Sppl3	exon	ENSMUSG00000029550	ProperStrand	33	chr11	83254019	83254035	protein_coding	1700020L24Rik	exon	ENSMUSG00000035085	NonProperStrand	88	1	-13.7508
chr11	97839893	97839981	protein_coding	Plxdc1	exon	ENSMUSG00000017417	ProperStrand	20	chr7	52976129	52976160	protein_coding	Rpl18	utr3	ENSMUSG00000059070	ProperStrand	116	2	-19.9625
chr17	28467956	28467972	protein_coding	Rpl10a	utr3	ENSMUSG00000037805	ProperStrand	121	chr5	108336378	108336495	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	6	-18.1780
chr4	130321892	130335944	protein_coding	Pum1	utr3	ENSMUSG00000028580	ProperStrand	131	chr16	23109051	23109093	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	2	-9.3550
chr2	62559806	62559822	protein_coding	Kcnh7	exon	ENSMUSG00000059742	NonProperStrand	5	chr12	106269283	106269383	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-9.2003
chr9	62639848	62639887	protein_coding	Fem1b	utr3	ENSMUSG00000032244	ProperStrand	111	chr9	40612077	40612148	snoRNA	ENSMUSG00000075924_Snord14d	.	ENSMUSG00000075924	ProperStrand	131	1	-10.5100
chr7	149200277	149200302	protein_coding	Mob2	intron	ENSMUSG00000025147	ProperStrand	20	chr7	116663636	116663758	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.5385
chr4	25711487	25711508	protein_coding	Fut9	intron	ENSMUSG00000055373	ProperStrand	10	chr17	24856620	24856757	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-10.0669
chr7	109534687	109556926	protein_coding	Stim1	exon	ENSMUSG00000030987	ProperStrand	24	chr7	116663665	116663755	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-10.2381
chr1	84728267	84728344	protein_coding	Trip12	exon	ENSMUSG00000026219	ProperStrand	248	chr5	111121102	111121192	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-3.7035
chr11	46277861	46277878	protein_coding	Havcr2	intron	ENSMUSG00000020399	ProperStrand	3	chr11	6428123	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-9.3720
chr7	28121134	28121152	protein_coding	Ltbp4	intron	ENSMUSG00000040488	ProperStrand	91	chr1	90598741	90598757	protein_coding	Arl4c	utr5	ENSMUSG00000049866	ProperStrand	25	1	-14.2484
chr16	42282955	42282971	protein_coding	Gap43	intron	ENSMUSG00000047261	NonProperStrand	25	chr9	15119632	15119693	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.2372
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr9	65011211	65011228	protein_coding	Igdcc3	intron	ENSMUSG00000032394	NonProperStrand	6	1	-13.3500
chr4	111418791	111420367	protein_coding	Spata6	exon	ENSMUSG00000034401	ProperStrand	16	chr11	69483136	69483187	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	9	-inf
chr2	145076802	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	chr9	64143795	64143877	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-2.4584
chr11	101467707	101467787	SINE	B1_Mus1	Alu	chr11B1_Mus1101467727	ProperStrand	1	chr4	136853455	136853544	protein_coding	Wnt4	utr3	ENSMUSG00000036856	ProperStrand	1	1	-inf
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr9	103401280	103401296	protein_coding	Tmem108	exon	ENSMUSG00000042757	NonProperStrand	323	2	-8.8178
chr12	36834132	36834172	protein_coding	Bzw2	exon	ENSMUSG00000020547	ProperStrand	29	chr17	85482653	85489599	protein_coding	Prepl	utr5	ENSMUSG00000024127	ProperStrand	106	1	-13.6408
chr11	74445722	74445740	protein_coding	E130309D14Rik	intron	ENSMUSG00000069814	NonProperStrand	3	chr19	8963028	8963128	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-8.3179
chr9	21823257	21823273	protein_coding	Elavl3	exon	ENSMUSG00000003410	NonProperStrand	137	chr4	131865380	131865409	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-2.5128
chr6	120909855	120909945	protein_coding	Mical3	exon	ENSMUSG00000051586	ProperStrand	104	chr17	35299553	35299633	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-3.7358
chr9	85582074	85600073	protein_coding	Ibtk	exon	ENSMUSG00000035941	ProperStrand	14	chr16	23110852	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-11.4341
chr12	86613707	86613760	protein_coding	Acyp1	exon	ENSMUSG00000008822	ProperStrand	6	chr1	162968463	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-10.8078
chr15	12763859	12763949	protein_coding	Drosha	exon	ENSMUSG00000022191	ProperStrand	163	chr11	68886930	68887010	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-2.3467
chr1	187254480	187254498	antisense	9630028B13Rik	.	ENSMUSG00000051295	ProperStrand	10	chr7	29136526	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	9	-19.6402
chr9	24307350	24307371	protein_coding	Dpy19l1	exon	ENSMUSG00000043067	ProperStrand	24	chr8	73419657	73419769	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-8.0712
chr7	63323464	63327765	protein_coding	Herc2	exon	ENSMUSG00000030451	ProperStrand	66	chr19	8799052	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-5.6456
chr15	93409051	93409131	protein_coding	Prickle1	intron	ENSMUSG00000036158	ProperStrand	11	chr19	9137807	9137897	protein_coding	Ahnak	intron	ENSMUSG00000069833	ProperStrand	103	1	-15.7146
chr15	74536497	74536557	protein_coding	Jrk	exon	ENSMUSG00000046380	ProperStrand	7	chr14	76372292	76372332	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	3	-inf
chr17	57209862	57209959	protein_coding	Dennd1c	exon	ENSMUSG00000002668	NonProperStrand	19	chr11	69553969	69554513	protein_coding	Polr2a	exon	ENSMUSG00000005198	ProperStrand	200	1	-13.2326
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr14	46277252	46277268	protein_coding	Ddhd1	exon	ENSMUSG00000037697	NonProperStrand	2	1	-16.4000
chr10	86161089	86161334	protein_coding	Hsp90b1	exon	ENSMUSG00000020048	ProperStrand	396	chr11	68887042	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-1.0240
chr9	44221118	44221169	protein_coding	Ccdc84	intron	ENSMUSG00000043923	ProperStrand	3	chr11	97642952	97643047	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-8.5513
mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr18	33989069	33989089	protein_coding	Epb4.1l4a	intron	ENSMUSG00000024376	ProperStrand	16	1	-8.5577
chr8	113683742	113684565	protein_coding	Glg1	exon	ENSMUSG00000003316	NonProperStrand	3	chr10	80645084	80645131	protein_coding	Eef2	utr3	ENSMUSG00000034994	NonProperStrand	20	1	-inf
chrX	96143157	96143187	protein_coding	Yipf6	utr3	ENSMUSG00000047694	ProperStrand	10	chrX	34622906	34622990	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	3	-15.5522
chr13	74658876	74658893	LINE	Lx2B	L1	chr13Lx2B74658501	ProperStrand	1	chr1	162965530	162965593	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-inf
chr12	114147799	114147824	protein_coding	Jag2	exon	ENSMUSG00000002799	ProperStrand	28	chr11	69483136	69483192	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.8243
chr18	14879694	14879716	protein_coding	Psma8	exon	ENSMUSG00000036743	ProperStrand	3	chr11	69483136	69483269	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-inf
mmu-miR-1195	1	17	miRNA	mmu-miR-1195	.	mmu-miR-1195	ProperStrand	13	chrX	100517086	100517102	protein_coding	Cdx4	exon	ENSMUSG00000031326	NonProperStrand	30	1	-17.8263
chr4	141239730	141264227	protein_coding	Ddi2	utr3	ENSMUSG00000078515	ProperStrand	79	chr7	117189956	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-4.9344
chr8	112626129	112626145	protein_coding	Gm17720	intron	ENSMUSG00000091041	ProperStrand	14	chr11	62416599	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-8.0774
chr11	99194952	99194968	protein_coding	Krt26	exon	ENSMUSG00000075570	ProperStrand	8	chr12	88778723	88778767	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-10.6116
chr13	44998536	44998626	protein_coding	Jarid2	exon	ENSMUSG00000038518	ProperStrand	372	chr4	131908814	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	8	-1.4644
chr19	31159174	31159235	protein_coding	Cstf2t	exon	ENSMUSG00000053536	ProperStrand	48	chr18	35716813	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.5460
chr4	43505656	43505931	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr18	73693108	73693191	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	26	-4.0701
chr12	111932371	111932433	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr9	64023292	64023329	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	1	-3.5350
chr3	20058104	20058194	LTR	RMER6C	ERVK	chr3RMER6C20058089	ProperStrand	1	chr3	25407316	25407406	protein_coding	Nlgn1	intron	ENSMUSG00000063887	ProperStrand	6	1	-inf
chr18	54582045	54582061	lincRNA	9430076G02Rik	exon	ENSMUSG00000084814	ProperStrand	30	chr1	162965531	162965554	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.5795
chr11	83107867	83107903	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	chr17	35088971	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-1.7973
chr6	119305063	119305080	protein_coding	Adipor2	utr3	ENSMUSG00000030168	ProperStrand	79	chr19	8972612	8972643	protein_coding	Ganab	exon	ENSMUSG00000071650	ProperStrand	145	1	-10.9890
chrX	12264319	12266463	protein_coding	Med14	exon	ENSMUSG00000064127	NonProperStrand	22	chr4	116828391	116828452	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	2	-16.4236
chr13	29760156	29760207	protein_coding	Cdkal1	intron	ENSMUSG00000006191	ProperStrand	43	chr13	49779719	49779761	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	3	-17.1786
chr13	58503699	58503716	protein_coding	Hnrnpk	intron	ENSMUSG00000021546	NonProperStrand	13	chr4	131908243	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-10.1656
chr2	132066014	132066036	protein_coding	5730494N06Rik	utr3	ENSMUSG00000027341	ProperStrand	4	chr16	23111423	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-6.3168
chr2	26493428	26493520	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr2	130101241	130101310	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	11	-13.9928
chr19	8787341	8787367	protein_coding	Slc3a2	exon	ENSMUSG00000010095	ProperStrand	63	chr9	123065930	123065946	protein_coding	Clec3b	exon	ENSMUSG00000025784	ProperStrand	58	1	-13.2875
chr12	83517908	83518008	protein_coding	Sipa1l1	exon	ENSMUSG00000042700	ProperStrand	84	chr15	73435891	73435912	protein_coding	Slc45a4	exon	ENSMUSG00000079020	ProperStrand	127	5	-inf
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	109149271	109149287	protein_coding	Numa1	exon	ENSMUSG00000066306	NonProperStrand	171	3	-6.6802
chr4	131826010	131826100	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	chr4	131908300	131908355	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	36	-19.3948
chr16	11193496	11193574	protein_coding	Rsl1d1	utr3	ENSMUSG00000005846	ProperStrand	65	chr2	26768395	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	2	-8.9194
chr15	98478934	98487132	protein_coding	Ddx23	exon	ENSMUSG00000003360	ProperStrand	63	chr3	88497851	88497979	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	11	-20.6102
chr2	162898455	162898502	protein_coding	Mybl2	exon	ENSMUSG00000017861	ProperStrand	230	chr10	127952789	127952814	protein_coding	Esyt1	exon	ENSMUSG00000025366	ProperStrand	31	1	-11.9524
chr2	90235326	90235345	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	149026816	149026832	protein_coding	Pik3cd	exon	ENSMUSG00000039936	ProperStrand	151	1	-2.7660
chr6	115912853	115912870	protein_coding	Plxnd1	intron	ENSMUSG00000030123	ProperStrand	10	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.0395
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	1	-8.4327
chr3	142351261	142351279	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr17	24665420	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	3	-1.9653
chr4	41065221	41065239	protein_coding	Nol6	exon	ENSMUSG00000028430	ProperStrand	98	chr8	121871959	121872056	protein_coding	Hsbp1	utr3	ENSMUSG00000031839	NonProperStrand	3	1	-18.7333
chr5	136707644	136707662	protein_coding	Sh2b2	exon	ENSMUSG00000005057	NonProperStrand	101	chr5	111121066	111121199	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	5	-inf
chr19	4834172	4834272	protein_coding	Ccs	exon	ENSMUSG00000034108	ProperStrand	5	chr1	162967494	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-8.4848
chr10	69653924	69653950	protein_coding	Ccdc6	utr3	ENSMUSG00000048701	NonProperStrand	4	chr7	116663646	116663711	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-7.9103
chr13	91925131	91925148	protein_coding	Acot12	utr3	ENSMUSG00000021620	NonProperStrand	7	chr16	23110460	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	5	-19.6988
chr4	43991166	43991246	protein_coding	Glipr2	utr3	ENSMUSG00000028480	ProperStrand	10	chr18	35716792	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-5.5279
chr16	23110453	23110514	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	chr17	71980682	71980706	snoRNA	ENSMUSG00000093289_Snord92	.	ENSMUSG00000093289	ProperStrand	56	4	-9.2700
chr2	145375449	145375465	protein_coding	Slc24a3	intron	ENSMUSG00000063873	ProperStrand	9	chr3	123210927	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.6210
chr2	26493366	26493487	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr1	39605590	39605693	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	5	-1.1020
chr9	65044377	65044477	snRNA	ENSMUSG00000075763_U5	.	ENSMUSG00000075763	ProperStrand	216	chr11	77996558	77996624	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-3.6365
chr12	114290175	114290191	protein_coding	Pacs2	intron	ENSMUSG00000021143	NonProperStrand	302	chr16	85802546	85802564	protein_coding	Adamts1	exon	ENSMUSG00000022893	ProperStrand	102	1	-9.0107
chr11	78300852	78300870	protein_coding	Sarm1	exon	ENSMUSG00000050132	NonProperStrand	13	chr2	166890559	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-10.6624
chr17	56533406	56533475	protein_coding	Kdm4b	exon	ENSMUSG00000024201	ProperStrand	45	chr16	23110962	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-2.1851
chr8	24042846	24042864	protein_coding	Myst3	exon	ENSMUSG00000031540	ProperStrand	111	chrX	103395621	103397786	protein_coding	Pgk1	exon	ENSMUSG00000062070	ProperStrand	484	2	-12.6166
chr13	44964997	44965036	protein_coding	Jarid2	intron	ENSMUSG00000038518	ProperStrand	372	chr1	88252835	88252873	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	NonProperStrand	2	1	-17.2335
chr3	153585789	153585863	protein_coding	Acadm	utr3	ENSMUSG00000062908	ProperStrand	14	chr18	33954815	33954899	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-6.3373
chr5	36945248	36945303	protein_coding	D5Ertd579e	utr3	ENSMUSG00000029190	ProperStrand	43	chr16	23110491	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	5	-13.5339
chr2	26768049	26768107	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	chr7	116664809	116664909	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	7	-1.7281
chr13	82636711	82636801	LINE	L1_Mus2	L1	chr13L1_Mus282636619	NonProperStrand	1	chr13	82636893	82636973	LINE	L1_Mus2	L1	chr13L1_Mus282636795	NonProperStrand	1	1	-inf
chr7	134562830	134562851	protein_coding	Zfp688	exon	ENSMUSG00000045251	ProperStrand	3	chr4	131865921	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.6896
chr4	79650114	79650380	pseudogene	Gm11410	.	ENSMUSG00000083219	ProperStrand	47	chr16	23110852	23110960	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-3.1482
chr12	3968611	3968627	protein_coding	Efr3b	exon	ENSMUSG00000020658	ProperStrand	142	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-6.0341
chr13	110693373	110693391	protein_coding	Pde4d	utr5	ENSMUSG00000021699	NonProperStrand	36	chr7	117189957	117190047	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-7.1819
chr15	81937523	81937539	protein_coding	Mei1	exon	ENSMUSG00000068117	ProperStrand	53	chr9	64024466	64024549	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	1	-8.6141
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr9	64024466	64024524	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	1	-2.2821
chr16	36772113	36772130	protein_coding	Slc15a2	exon	ENSMUSG00000022899	ProperStrand	13	chr16	18240811	18240871	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	1	-12.2397
chr8	40681587	40681603	protein_coding	Msr1	intron	ENSMUSG00000025044	ProperStrand	138	chr5	65402504	65402575	protein_coding	Fam114a1	intron	ENSMUSG00000029185	ProperStrand	7	1	-16.0938
chrX	139155042	139155059	protein_coding	Tmem164	intron	ENSMUSG00000047045	NonProperStrand	29	chr19	8799581	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	2	-13.1345
chr2	144369716	144369737	protein_coding	Rbbp9	exon	ENSMUSG00000027428	ProperStrand	2	chr3	68889150	68889239	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-10.5388
chr2	131647539	131647555	processed_transcript	5330413P13Rik	.	ENSMUSG00000086822	NonProperStrand	1	chr5	115940333	115940406	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	1	-inf
chr1	172779296	172783073	protein_coding	Atf6	exon	ENSMUSG00000026663	ProperStrand	35	chr16	23110879	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.8578
chr11	4942416	4942485	protein_coding	Ap1b1	utr3	ENSMUSG00000009090	ProperStrand	43	chr11	102294587	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	1	-9.5635
chr17	12891390	12891446	protein_coding	Igf2r	exon	ENSMUSG00000023830	ProperStrand	151	chr7	67123695	67123721	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	2	-12.3000
chr16	23110454	23110526	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	chr4	116827118	116827189	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	21	-5.8734
chr9	63042015	63042031	protein_coding	Map2k5	exon	ENSMUSG00000058444	ProperStrand	193	chr7	52381719	52381755	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-5.2738
chr19	56862613	56862669	protein_coding	A630007B06Rik	utr3	ENSMUSG00000035173	ProperStrand	11	chr10	127553362	127553452	protein_coding	Baz2a	exon	ENSMUSG00000040054	ProperStrand	274	1	-13.7362
chr10	60563310	60563330	protein_coding	Sgpl1	utr3	ENSMUSG00000020097	ProperStrand	34	chr16	23111372	23111505	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.1231
chr13	87355317	87355407	LINE	L1_Mus1	L1	chr13L1_Mus187354288	NonProperStrand	1	chr3	120166832	120166912	LINE	L1Md_F2	L1	chr3L1Md_F2120166192	NonProperStrand	1	1	-inf
chr4	52489654	52491305	protein_coding	Smc2	exon	ENSMUSG00000028312	ProperStrand	50	chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-6.8159
chr2	90235307	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr16	38089866	38108843	protein_coding	Gsk3b	intron	ENSMUSG00000022812	ProperStrand	80	2	-6.5955
chr10	77450800	77450882	protein_coding	Pfkl	utr3	ENSMUSG00000020277	ProperStrand	179	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	4	-10.7220
chr10	80512872	80512895	protein_coding	Sgta	intron	ENSMUSG00000004937	ProperStrand	17	chr11	97642980	97643038	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.8122
chr7	31338241	31338341	protein_coding	Hspb6	utr5	ENSMUSG00000036854	ProperStrand	4	chr7	118219574	118219616	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-9.7412
chr4	129662259	129662276	protein_coding	Bai2	utr5	ENSMUSG00000028782	ProperStrand	119	chr15	98860848	98864567	protein_coding	Tuba1c	exon	ENSMUSG00000043091	ProperStrand	28	1	-13.4783
chr2	68049960	68050050	protein_coding	Stk39	utr3	ENSMUSG00000027030	ProperStrand	12	chr7	116664814	116664894	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-5.5966
chr1	45488603	45488620	protein_coding	Col5a2	intron	ENSMUSG00000026042	ProperStrand	184	chr1	59540759	59540811	protein_coding	Fzd7	exon	ENSMUSG00000041075	ProperStrand	373	1	-7.4162
chr7	13396867	13396948	protein_coding	Zfp329	utr5	ENSMUSG00000057894	ProperStrand	6	chr9	64022858	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-12.7791
chr2	24486827	24486900	protein_coding	Cacna1b	intron	ENSMUSG00000004113	ProperStrand	83	chr4	131865856	131865957	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	7	-11.5492
chr7	19637846	19637862	protein_coding	Sympk	exon	ENSMUSG00000023118	NonProperStrand	15	chr12	17552949	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-7.8562
chr8	72438624	72438678	protein_coding	Gatad2a	exon	ENSMUSG00000036180	ProperStrand	112	chr1	162967514	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-4.1999
chr1	168209715	168209732	protein_coding	Ildr2	intron	ENSMUSG00000040612	NonProperStrand	26	chr4	131908838	131908900	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.5345
chr2	90235291	90235341	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	110922581	110923720	protein_coding	Nap1l1	exon	ENSMUSG00000058799	ProperStrand	185	1	-2.4172
chr19	5796572	5796623	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr9	120039431	120039457	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	1	-3.8691
chr7	51505866	51505890	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	chr7	118219574	118219666	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-1.1542
chr19	5797398	5797448	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr10	80642923	80642939	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-1.0441
chr2	30198498	30198839	protein_coding	Nup188	exon	ENSMUSG00000052533	ProperStrand	96	chr18	35714252	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-2.6048
chr11	95532860	95536520	protein_coding	Phb	exon	ENSMUSG00000038845	ProperStrand	126	chr7	29136574	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.2246
chr4	150240607	150240696	protein_coding	Errfi1	exon	ENSMUSG00000028967	ProperStrand	1	chr15	101828442	101828458	protein_coding	Krt8	exon	ENSMUSG00000049382	ProperStrand	12	1	-inf
chr11	12167081	12239154	protein_coding	Cobl	exon	ENSMUSG00000020173	ProperStrand	133	chr4	131865855	131865946	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	6	-6.5419
chr10	79172804	79173013	protein_coding	Bsg	exon	ENSMUSG00000023175	ProperStrand	107	chr9	120038608	120038650	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.0497
chr4	117317829	117317929	protein_coding	Eri3	intron	ENSMUSG00000033423	ProperStrand	246	chr11	69483135	69483213	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	4	-2.9485
chr5	14252800	14252816	protein_coding	Sema3e	utr3	ENSMUSG00000063531	ProperStrand	125	chr9	120039623	120039657	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.0495
chr4	68423440	68423456	protein_coding	Dbc1	exon	ENSMUSG00000028351	ProperStrand	78	chr16	23111394	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-1.8468
chr16	34986602	34986618	protein_coding	Mylk	exon	ENSMUSG00000022836	NonProperStrand	56	chr16	23110844	23110934	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-3.6136
chr7	19650911	19650928	protein_coding	Rsph6a	exon	ENSMUSG00000040866	ProperStrand	12	chr11	6519813	6519903	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	5	-21.4598
chr5	115956842	115956858	protein_coding	Pxn	utr5	ENSMUSG00000029528	ProperStrand	171	chr11	97642954	97643008	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-0.9150
chr6	127916469	127916814	protein_coding	Tspan9	exon	ENSMUSG00000030352	ProperStrand	67	chr4	41150097	41150142	snoRNA	ENSMUSG00000089265_SNORD121A	.	ENSMUSG00000089265	ProperStrand	370	4	-19.1214
chr9	70324375	70324391	protein_coding	Rnf111	exon	ENSMUSG00000032217	NonProperStrand	13	chr8	122814155	122814176	protein_coding	Gm20388	intron	ENSMUSG00000092329	NonProperStrand	203	1	-13.9876
chr9	20713540	20714172	protein_coding	Dnmt1	exon	ENSMUSG00000004099	ProperStrand	91	chr16	23111374	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-1.5370
chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	chr7	52381722	52381761	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-4.6074
chr3	22110992	22111026	protein_coding	Tbl1xr1	utr3	ENSMUSG00000027630	ProperStrand	44	chr11	69483135	69483211	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-7.6794
chr15	79260200	79260234	protein_coding	Csnk1e	exon	ENSMUSG00000022433	ProperStrand	59	chr7	117190023	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	3	-8.4331
chr4	147062417	147062507	protein_coding	Zfp534	intron	ENSMUSG00000062518	ProperStrand	1	chr4	146944346	146944436	protein_coding	Gm13154	intron	ENSMUSG00000065999	ProperStrand	4	1	-inf
chr1	137271110	137271126	protein_coding	Shisa4	exon	ENSMUSG00000041889	ProperStrand	64	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-7.6108
chr14	55196074	55196146	protein_coding	Jub	utr5	ENSMUSG00000022178	ProperStrand	25	chr11	97642984	97643074	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.0636
chr10	70240006	70240096	LTR	ORR1A2	MaLR	chr10ORR1A270239770	NonProperStrand	1	chr10	70240178	70240258	SINE	PB1D7	Alu	chr10PB1D770240152	NonProperStrand	1	1	-inf
chr11	100343140	100343537	protein_coding	Acly	exon	ENSMUSG00000020917	ProperStrand	183	chr19	8799038	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	5	-15.3895
chr4	8793162	8793179	protein_coding	Chd7	exon	ENSMUSG00000041235	ProperStrand	80	chr19	8963052	8963084	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.8098
chr13	58117952	58117968	protein_coding	Klhl3	intron	ENSMUSG00000014164	NonProperStrand	11	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-10.6842
chr4	55363030	55363046	protein_coding	Rad23b	utr5	ENSMUSG00000028426	ProperStrand	86	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-10.0399
chr7	31663114	31664217	protein_coding	Cd22	utr5	ENSMUSG00000030577	NonProperStrand	128	chr13	23513854	23513943	protein_coding	Abt1	exon	ENSMUSG00000036376	ProperStrand	17	2	-inf
chr12	80170914	80171000	protein_coding	Plekhh1	exon	ENSMUSG00000060716	ProperStrand	24	chrX	71517852	71517904	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-8.3819
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr11	69732745	69734678	protein_coding	Eif5a	utr5	ENSMUSG00000078812	ProperStrand	164	1	-9.3543
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	4	-2.5937
chr4	142940005	142940026	protein_coding	Lrrc38	utr5	ENSMUSG00000028584	ProperStrand	9	chr7	29136525	29136554	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.9747
chr3	132895990	132896006	protein_coding	D630013G24Rik	intron	ENSMUSG00000040969	ProperStrand	4	chr2	26493423	26493488	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-15.2166
chr9	20722746	20722953	protein_coding	Dnmt1	exon	ENSMUSG00000004099	ProperStrand	91	chr17	13112533	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-3.7924
chr11	70808648	70808673	protein_coding	Dhx33	exon	ENSMUSG00000040620	ProperStrand	41	chr19	8800355	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-4.2442
chr11	51464192	51464208	protein_coding	N4bp3	utr5	ENSMUSG00000001053	NonProperStrand	41	chr1	187083391	187084373	protein_coding	Rab3gap2	exon	ENSMUSG00000039318	ProperStrand	41	4	-inf
chr2	49344311	49368735	protein_coding	Epc2	exon	ENSMUSG00000069495	ProperStrand	15	chr5	74489611	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-6.4878
chr17	46861595	46861611	protein_coding	Pex6	exon	ENSMUSG00000002763	ProperStrand	292	chr12	88778631	88778702	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-3.4628
chr2	6797056	6797074	protein_coding	Celf2	intron	ENSMUSG00000002107	NonProperStrand	26	chr2	130101971	130102075	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	NonProperStrand	12	1	-18.1869
chr3	88392099	88392248	protein_coding	Ssr2	utr3	ENSMUSG00000041355	ProperStrand	22	chr7	29136559	29136654	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	5	-17.3924
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr10	127525436	127525497	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	1	-3.4758
chr4	100839184	100843865	protein_coding	Jak1	exon	ENSMUSG00000028530	ProperStrand	30	chr1	162967512	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.7879
chr17	56563496	56563596	protein_coding	Ptprs	exon	ENSMUSG00000013236	ProperStrand	152	chr17	35087895	35087942	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-3.4412
chr6	113268704	113269120	protein_coding	Brpf1	exon	ENSMUSG00000001632	ProperStrand	23	chr16	23110901	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-6.1604
chr10	62052566	62052666	protein_coding	Ddx21	exon	ENSMUSG00000020075	ProperStrand	137	chr15	79913288	79913341	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.1438
chr16	98078088	98078104	protein_coding	C2cd2	utr3	ENSMUSG00000045975	ProperStrand	9	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-9.0335
chr14	45949538	45949554	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	chr8	119465076	119465108	protein_coding	Cenpn	utr3	ENSMUSG00000031756	ProperStrand	15	1	-12.7427
chr1	42919825	42919914	protein_coding	Mrps9	intron	ENSMUSG00000060679	ProperStrand	26	chr5	108336363	108336436	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-6.5273
chr1	138526428	138526468	protein_coding	Zfp281	utr3	ENSMUSG00000041483	ProperStrand	18	chr9	120039622	120039684	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-5.6296
chr16	5256015	5256031	protein_coding	Fam86	utr5	ENSMUSG00000022544	ProperStrand	231	chr1	162968212	162968244	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-4.1981
chr10	77868177	77872032	protein_coding	Rrp1	exon	ENSMUSG00000061032	ProperStrand	177	chr11	69483136	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-2.8482
chr9	59519478	59519741	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr1	63225652	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-1.1803
chr17	45570871	45570929	lincRNA	B230354K17Rik	exon	ENSMUSG00000073393	ProperStrand	11	chr19	8963027	8963123	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-9.0642
chr7	152118612	152118652	protein_coding	Ccnd1	exon	ENSMUSG00000070348	ProperStrand	93	chr15	98350146	98350229	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-3.9279
chrX	148355646	148355689	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	chr13	34222117	34222207	protein_coding	Tubb2b	utr5	ENSMUSG00000045136	ProperStrand	49	2	-15.0060
chr11	101321305	101321342	protein_coding	Vat1	utr3	ENSMUSG00000034993	ProperStrand	69	chr10	5991549	5991580	protein_coding	Akap12	exon	ENSMUSG00000038587	ProperStrand	1008	1	-7.3970
chr8	3524148	3524311	protein_coding	Pnpla6	exon	ENSMUSG00000004565	ProperStrand	60	chr15	34370549	34370618	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-3.5492
chr5	125604236	125604255	protein_coding	Ncor2	intron	ENSMUSG00000029478	ProperStrand	377	chr15	34370545	34370607	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-0.7086
chrX	111099960	111099978	LINE	L1_Mm	L1	chrXL1_Mm111099865	ProperStrand	5	chr5	145956950	145957015	protein_coding	Zkscan14	exon	ENSMUSG00000029627	ProperStrand	2	2	-inf
chr11	115649673	115649690	protein_coding	2310067B10Rik	exon	ENSMUSG00000020747	NonProperStrand	8	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-12.7259
chr14	76247753	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	NonProperStrand	16	chr19	8963051	8963151	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-12.8431
chr8	32261154	32261244	protein_coding	Tti2	utr5	ENSMUSG00000031577	ProperStrand	13	chr3	123210857	123210968	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	8	-20.8774
chr4	115425527	115425575	protein_coding	4732418C07Rik	exon	ENSMUSG00000034210	ProperStrand	16	chr19	8963027	8963085	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-11.4016
chr16	23110454	23110562	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	chr2	166890531	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	8	-0.6939
chr11	9701973	9702063	LINE	L1_Rod	L1	chr11L1_Rod9701822	ProperStrand	1	chr11	9702198	9702278	Other	RMER1B	Other	chr11RMER1B9702147	ProperStrand	1	1	-inf
chr11	116535923	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr9	103238184	103238284	protein_coding	Topbp1	exon	ENSMUSG00000032555	ProperStrand	81	1	-5.3237
chr4	129991228	129992452	protein_coding	Fabp3	exon	ENSMUSG00000028773	ProperStrand	93	chr7	108077697	108077717	protein_coding	Arhgef17	exon	ENSMUSG00000032875	ProperStrand	33	8	-19.0777
chr15	98924269	98924291	protein_coding	Dnajc22	intron	ENSMUSG00000038009	NonProperStrand	10	chr5	74489542	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-7.3223
chr2	129037182	129037282	protein_coding	Slc20a1	utr3	ENSMUSG00000027397	ProperStrand	81	chr1	162967514	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-2.9321
chr2	121949511	121949528	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	chr4	143027927	143028559	protein_coding	Oog4	exon	ENSMUSG00000047799	NonProperStrand	99	1	-9.2937
chr7	109232095	109232188	protein_coding	Trpc2	utr3	ENSMUSG00000070425	ProperStrand	15	chr4	132394334	132394363	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	3	-inf
chr1	63225245	63225289	protein_coding	Eef1b2	intron	ENSMUSG00000025967	ProperStrand	106	chr1	162968456	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	2	-8.1896
chr11	29147209	29147272	protein_coding	Ccdc104	utr5	ENSMUSG00000020462	ProperStrand	20	chr19	8963027	8963114	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.2716
chr8	87340233	87340249	protein_coding	Dand5	exon	ENSMUSG00000053226	ProperStrand	34	chr1	162965980	162965999	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-4.6796
chr18	77344548	77344607	protein_coding	Pias2	exon	ENSMUSG00000025423	ProperStrand	52	chr7	118219705	118219729	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	3	-10.6694
chr17	57161001	57164430	protein_coding	Khsrp	utr3	ENSMUSG00000007670	ProperStrand	353	chr7	116664794	116664916	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	6	-3.8794
chr5	75473198	75473215	protein_coding	Gsx2	utr3	ENSMUSG00000035946	ProperStrand	307	chr9	120039533	120039563	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-1.6212
chr8	87411605	87411695	protein_coding	Syce2	utr3	ENSMUSG00000003824	ProperStrand	8	chr7	116663653	116663733	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-6.3908
chr2	41199972	41199989	protein_coding	Lrp1b	exon	ENSMUSG00000049252	ProperStrand	376	chr5	108336363	108336457	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-1.6330
chr4	116289668	116289748	protein_coding-noncoding	Nasp	utr3	ENSMUSG00000028693	ProperStrand	8	chr4	116289520	116289610	protein_coding	Nasp	intron	ENSMUSG00000028693	ProperStrand	64	1	-17.1469
chr8	96697324	96697424	protein_coding	Mt2	utr3	ENSMUSG00000031762	ProperStrand	71	chr19	8798491	8798550	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-4.8855
chr10	75359822	75360194	protein_coding	Smarcb1	exon	ENSMUSG00000000902	ProperStrand	109	chr9	50816824	50816841	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	1	-10.6088
chr7	4691730	4691749	protein_coding	Suv420h2	utr5	ENSMUSG00000059851	NonProperStrand	70	chr10	23505152	23505215	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-2.0368
chr11	82692475	82692491	protein_coding	Rad51l3	exon	ENSMUSG00000018841	ProperStrand	112	chr13	107747402	107747522	protein_coding	Dimt1	intron	ENSMUSG00000021692	ProperStrand	185	1	-9.8016
chr1	136403781	136403797	protein_coding	Rabif	utr3	ENSMUSG00000042229	NonProperStrand	1	chr2	25733351	25733370	protein_coding	Kcnt1	intron	ENSMUSG00000058740	ProperStrand	8	1	-inf
chr15	82980126	82980226	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr1	155287311	155287354	snoRNA	ENSMUSG00000064435_SNORA4	.	ENSMUSG00000064435	ProperStrand	263	1	-4.2616
chr15	79415570	79415654	protein_coding	Dmc1	intron	ENSMUSG00000022429	ProperStrand	8	chr9	64023228	64023260	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	1	-12.5780
chr2	135360025	135360043	antisense	9630028H03Rik	.	ENSMUSG00000085631	NonProperStrand	22	chr13	99614413	99614444	protein_coding	Tnpo1	utr3	ENSMUSG00000009470	ProperStrand	56	1	-15.4794
chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	chr11	101466271	101466351	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	1	-4.8334
chr6	119077054	119077070	protein_coding	Cacna1c	intron	ENSMUSG00000051331	NonProperStrand	49	chr3	68889023	68889108	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-3.6288
chr2	50989715	50992657	protein_coding	Rnd3	exon	ENSMUSG00000017144	ProperStrand	4	chr8	126441405	126441421	protein_coding	Nup133	exon	ENSMUSG00000039509	ProperStrand	59	1	-18.4600
chr17	27223941	27224106	protein_coding	Itpr3	exon	ENSMUSG00000042644	ProperStrand	137	chr2	26494708	26494824	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.7205
chr13	97949144	97949162	protein_coding	Gfm2	utr3	ENSMUSG00000021666	ProperStrand	26	chr16	23110902	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.4162
chr2	158451026	158451042	protein_coding	Actr5	exon	ENSMUSG00000037761	NonProperStrand	94	chr8	97437113	97437130	protein_coding	Ccdc102a	exon	ENSMUSG00000063605	ProperStrand	11	1	-15.8484
chr1	32601050	32601067	protein_coding	Khdrbs2	intron	ENSMUSG00000026058	ProperStrand	10	chr19	8800356	8800416	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-7.0560
chr17	35138586	35138670	protein_coding	Vars	exon	ENSMUSG00000007029	ProperStrand	121	chr11	117729370	117729386	protein_coding	Tha1	utr3	ENSMUSG00000017713	NonProperStrand	56	1	-12.0434
chr2	173089750	173089777	protein_coding	Pmepa1	intron	ENSMUSG00000038400	ProperStrand	25	chr1	63225655	63225692	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-8.4230
chr18	32405206	32405222	protein_coding	Ercc3	exon	ENSMUSG00000024382	ProperStrand	280	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-0.8197
chr13	90238585	90238709	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	chr18	33954914	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	6	-3.7691
chr14	39182648	39182666	protein_coding-noncoding	Nrg3	utr3	ENSMUSG00000041014	NonProperStrand	30	chr9	65049530	65049645	snRNA	ENSMUSG00000075930_U5	.	ENSMUSG00000075930	ProperStrand	175	2	-18.8371
chr2	25793551	25793641	protein_coding	Camsap1	utr3	ENSMUSG00000026933	ProperStrand	27	chr9	120039533	120039587	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	5	-19.1726
chr3	87729086	87729124	protein_coding	Rrnad1	exon	ENSMUSG00000004896	ProperStrand	3	chr16	23110986	23111378	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr19	44188428	44188518	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr5	144645709	144645789	protein_coding	Eif2ak1	exon	ENSMUSG00000029613	ProperStrand	37	1	-8.7652
chr10	87896028	87896045	protein_coding	Gnptab	exon	ENSMUSG00000035311	NonProperStrand	6	chr10	23505261	23505284	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-5.3874
chr3	9434759	9434851	protein_coding	Zfp704	utr3	ENSMUSG00000040209	ProperStrand	67	chr11	62416575	62416634	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-4.9525
chr2	5863623	5863647	protein_coding	Dhtkd1	exon	ENSMUSG00000025815	ProperStrand	46	chr11	77996560	77996602	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-6.6179
chr15	101923524	101923582	protein_coding	Eif4b	exon	ENSMUSG00000058655	ProperStrand	484	chr7	109149271	109149287	protein_coding	Numa1	exon	ENSMUSG00000066306	NonProperStrand	171	1	-7.0463
chr3	82816758	82816776	protein_coding	Fgg	exon	ENSMUSG00000033860	NonProperStrand	321	chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	1	-4.8132
chr4	43505840	43505930	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr8	108048540	108048614	protein_coding	Atp6v0d1	utr3	ENSMUSG00000013160	ProperStrand	35	1	-4.0672
chr9	35045573	35045663	protein_coding	Srpr	intron	ENSMUSG00000032042	ProperStrand	54	chr9	40263424	40263514	protein_coding	Gramd1b	intron	ENSMUSG00000040111	NonProperStrand	12	1	-16.8471
chr10	110409754	110409844	protein_coding	Zdhhc17	intron	ENSMUSG00000035798	ProperStrand	11	chr2	32818853	32818933	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-8.8904
chr4	8533594	8533610	protein_coding	Rab2a	exon	ENSMUSG00000047187	ProperStrand	23	chr11	6428067	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	6	-19.9488
chr2	90235301	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr14	65372754	65372891	snoRNA	ENSMUSG00000064442_SNORA36	.	ENSMUSG00000064442	ProperStrand	296	3	-4.7335
chr14	80262508	80262525	lincRNA	Gm6999	intron	ENSMUSG00000075495	ProperStrand	265	chr16	23110455	23110519	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-1.0139
chr4	147988651	147988668	protein_coding	Tardbp	utr3	ENSMUSG00000041459	ProperStrand	120	chr11	48615557	48615574	snoRNA	ENSMUSG00000064725_Snord96a	.	ENSMUSG00000064725	ProperStrand	89	1	-11.1291
chr2	180510920	180510937	protein_coding	Bhlhe23	exon	ENSMUSG00000045493	NonProperStrand	28	chr9	15118322	15118358	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-4.9141
chr16	5256015	5256031	protein_coding	Fam86	utr5	ENSMUSG00000022544	ProperStrand	231	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-5.0876
chr5	137940319	137940420	protein_coding	Epo	intron	ENSMUSG00000029711	ProperStrand	27	chr11	97642952	97643002	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	16	-inf
chr10	72280379	72280459	LINE	Lx5	L1	chr10Lx572279664	NonProperStrand	1	chr14	15905275	15905365	LTR	MTD	MaLR	chr14MTD15904964	ProperStrand	1	1	-inf
chr5	74489542	74489563	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr19	25484358	25484374	protein_coding	Kank1	exon	ENSMUSG00000032702	ProperStrand	218	1	-3.1816
chr2	26493428	26493518	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr5	45888578	45888629	protein_coding	Lap3	exon	ENSMUSG00000039682	ProperStrand	87	1	-5.4658
chr2	120996749	120996766	protein_coding	Tubgcp4	intron	ENSMUSG00000027263	ProperStrand	30	chr8	73419543	73419822	protein_coding	Rpl18a	exon	ENSMUSG00000045128	ProperStrand	394	1	-10.9430
chr2	120872244	120872260	protein_coding	Tgm5	exon	ENSMUSG00000053675	NonProperStrand	163	chr4	116827118	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-5.0794
chr11	101140747	101144748	protein_coding	Cntd1	utr5	ENSMUSG00000078653	ProperStrand	3	chr16	23110840	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr16	11144201	11144301	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr17	35299507	35299561	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	NonProperStrand	14	2	-inf
chr16	23111397	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	chr1	88248602	88248662	snoRNA	ENSMUSG00000064696_SNORD20	.	ENSMUSG00000064696	ProperStrand	89	2	-1.5803
chr9	59197670	59197687	protein_coding	Bbs4	intron	ENSMUSG00000025235	ProperStrand	6	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-14.1247
chr17	6232006	6232022	protein_coding	Tulp4	exon	ENSMUSG00000034377	NonProperStrand	265	chr9	120038588	120038622	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-0.7852
chr3	102648960	102648998	protein_coding	Sycp1	exon	ENSMUSG00000027855	NonProperStrand	1	chr8	98270068	98270092	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-inf
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr8	108129061	108129151	Simple_repeat	(CGGGG)n	Simple_repeat	chr8(CGGGG)n108129072	ProperStrand	4	3	-20.5299
chr2	90235288	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	116826698	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	5	-1.3603
chr4	140121137	140121154	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	chr18	35716762	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-1.9328
chr16	22382523	22413037	protein_coding	Etv5	exon	ENSMUSG00000013089	ProperStrand	88	chr10	23505156	23505282	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-3.8577
chr16	20686388	20686418	protein_coding	Eif4g1	exon	ENSMUSG00000045983	ProperStrand	199	chr17	13112473	13112563	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-2.3980
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr13	34436854	34436870	protein_coding	Slc22a23	utr5	ENSMUSG00000038267	ProperStrand	95	1	-5.0078
chr2	128452881	128454272	protein_coding	Anapc1	exon	ENSMUSG00000014355	ProperStrand	38	chr1	162965984	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-4.4652
chr5	53035198	53035275	protein_coding	Sepsecs	exon	ENSMUSG00000029173	ProperStrand	7	chr9	120038029	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	3	-19.0815
chr4	131908362	131908906	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr10	110918549	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	7	-1.4990
chr9	120039533	120039621	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	chr5	147646733	147646823	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	5	-1.3058
chr19	5799196	5799232	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr5	74489206	74489296	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	2	-1.5489
chr10	95005120	95005155	protein_coding	Ube2n	utr3	ENSMUSG00000074781	ProperStrand	10	chr19	8798738	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-8.3986
chr1	54870214	54870231	protein_coding	Ankrd44	intron	ENSMUSG00000052331	ProperStrand	27	chr8	32260373	32260424	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-6.1942
chr8	114518782	114518856	protein_coding	Kars	exon	ENSMUSG00000031948	ProperStrand	89	chr4	3762227	3762256	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	1	-8.6987
chr3	5218565	5218581	protein_coding	Zfhx4	utr5	ENSMUSG00000025255	ProperStrand	7	chr2	83693562	83693578	protein_coding	Fam171b	exon	ENSMUSG00000048388	NonProperStrand	175	1	-15.5800
chr2	72784621	72784706	protein_coding	Sp3	exon	ENSMUSG00000027109	ProperStrand	11	chr1	162965536	162965570	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-6.5834
chr7	52382817	52382854	protein_coding	Rpl13a	intron	ENSMUSG00000074129	ProperStrand	269	chr2	32818817	32818907	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-2.6736
chr11	67167096	67167112	protein_coding	Myh13	exon	ENSMUSG00000060180	ProperStrand	145	chr1	162965531	162965561	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.7778
chr17	47506742	47506782	protein_coding-noncoding	Mrps10	utr5	ENSMUSG00000034729	ProperStrand	2	chr9	96442093	96442193	protein_coding	Rasa2	utr3	ENSMUSG00000032413	ProperStrand	11	2	-inf
chr13	38437929	38437946	protein_coding	Bmp6	utr5	ENSMUSG00000039004	ProperStrand	21	chr16	23111374	23111499	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	5	-13.5788
chr16	33047735	33047778	processed_transcript	Gm17106	.	ENSMUSG00000078489	NonProperStrand	11	chr5	115939535	115939612	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-11.3212
chr13	8851351	8851367	protein_coding	Wdr37	intron	ENSMUSG00000021147	ProperStrand	8	chrX	84483704	84483727	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-12.3815
chr10	77050016	77050043	protein_coding	Pttg1ip	exon	ENSMUSG00000009291	ProperStrand	28	chr10	120709244	120712786	protein_coding	Tbc1d30	exon	ENSMUSG00000052302	ProperStrand	233	1	-12.1342
chr7	53658835	53658852	protein_coding	Kcnc1	intron	ENSMUSG00000058975	ProperStrand	21	chr17	24665420	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-7.0183
chr3	142351261	142351279	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr10	117258675	117259882	protein_coding	Rap1b	exon	ENSMUSG00000052681	ProperStrand	15	1	-10.6054
chr4	154021905	154021995	lincRNA	Gm13110	exon	ENSMUSG00000086810	ProperStrand	1	chr11	69481340	69481420	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-inf
chr4	63389602	63389618	protein_coding	Tnfsf15	utr3	ENSMUSG00000050395	NonProperStrand	121	chr10	90432659	90432679	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	2	-14.5735
chr17	31120939	31120955	protein_coding	Umodl1	exon	ENSMUSG00000054134	ProperStrand	24	chr3	94167315	94167331	protein_coding	C2cd4d	utr5	ENSMUSG00000091648	ProperStrand	30	1	-16.6182
chr19	39033636	39034186	protein_coding	Hells	exon	ENSMUSG00000025001	ProperStrand	23	chr16	23110555	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.2122
chr6	134216632	134216691	protein_coding	Etv6	utr3	ENSMUSG00000030199	ProperStrand	46	chr3	97462230	97462246	protein_coding	Prkab2	utr5	ENSMUSG00000038205	NonProperStrand	4	1	-19.9762
chrX	71203594	71203694	protein_coding	Hcfc1	exon	ENSMUSG00000031386	ProperStrand	424	chr14	33005095	33005138	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-0.8447
chr4	128337469	128337486	protein_coding	Phc2	intron	ENSMUSG00000028796	NonProperStrand	10	chr19	8798484	8798501	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-8.8233
chr11	106935601	106935679	protein_coding	Bptf	exon	ENSMUSG00000040481	ProperStrand	70	chr4	131866219	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-3.3813
chr5	115777485	115777502	protein_coding	Srsf9	exon	ENSMUSG00000029538	ProperStrand	19	chr4	131865391	131865445	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	2	-10.1890
mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr8	92871938	92871956	protein_coding	Tox3	utr5	ENSMUSG00000043668	ProperStrand	7	1	-10.2930
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr5	108336416	108336495	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-1.0891
chr17	32453268	32453285	protein_coding	Akap8	exon	ENSMUSG00000024045	ProperStrand	339	chr10	80641491	80641579	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	5	-12.5998
chr6	57638553	57638569	protein_coding	Pigy	utr3	ENSMUSG00000043162	NonProperStrand	18	chr11	58809803	58810353	protein_coding	Obscn	exon	ENSMUSG00000061462	ProperStrand	81	1	-15.1470
chr15	82725599	82725637	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	chr15	34370561	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	4	-1.8003
chr2	154206850	154209580	protein_coding	Snta1	exon	ENSMUSG00000027488	ProperStrand	7	chr9	78326936	78326958	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	3	-20.4594
chr5	40348489	40348579	LINE	Lx3_Mus	L1	chr5Lx3_Mus40347035	ProperStrand	1	chr5	40348850	40348940	LINE	Lx3_Mus	L1	chr5Lx3_Mus40348821	ProperStrand	1	1	-inf
chr15	37898256	37932001	protein_coding	Ubr5	exon	ENSMUSG00000037487	ProperStrand	258	chr2	26493416	26493497	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	3	-3.9186
chr2	129998643	129998718	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr18	35716685	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	9	-1.3491
chr17	35299507	35299607	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	chr7	67123693	67123739	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	1	-1.4804
chr10	111422801	111422827	protein_coding	Krr1	utr3	ENSMUSG00000063334	ProperStrand	10	chr11	69483136	69483237	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-5.8555
chr19	24061526	24061545	protein_coding	Fam189a2	intron	ENSMUSG00000071604	NonProperStrand	2	chr11	62418035	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-12.9780
chr4	106327003	106327060	protein_coding	Pars2	exon	ENSMUSG00000043572	ProperStrand	6	chr8	87525221	87525238	protein_coding	Hook2	exon	ENSMUSG00000052566	ProperStrand	204	1	-15.6119
chr11	97641452	97641500	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	chr17	39985557	39985657	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-1.1370
chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	chr2	134423147	134423167	protein_coding	Tmx4	utr3	ENSMUSG00000034723	ProperStrand	7	1	-17.0509
chr10	77432749	77432770	protein_coding	Trpm2	intron	ENSMUSG00000009292	NonProperStrand	23	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-8.8513
chr7	6092182	6092230	protein_coding	Zfp787	intron	ENSMUSG00000046792	ProperStrand	16	chr16	23111779	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-7.2124
chr6	70845374	70845416	protein_coding	Eif2ak3	intron	ENSMUSG00000031668	ProperStrand	13	chr16	23110894	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.3283
chr14	60891164	60891183	protein_coding	Mtmr6	intron	ENSMUSG00000021987	ProperStrand	7	chr11	120151148	120151270	protein_coding	Bahcc1	utr3	ENSMUSG00000039741	ProperStrand	118	1	-16.4058
chr14	72280922	72281012	LTR	RMER13A	ERVK	chr14RMER13A72280702	ProperStrand	2	chr14	93553789	93553869	protein_coding	Pcdh9	intron	ENSMUSG00000055421	ProperStrand	59	1	-inf
chr8	75853997	75854024	protein_coding	Large	intron	ENSMUSG00000004383	ProperStrand	48	chr16	23111377	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.5796
chr15	90824821	90825919	protein_coding	Kif21a	exon	ENSMUSG00000022629	ProperStrand	18	chr10	39978307	39978387	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-7.8632
chr3	88155088	88155188	protein_coding	Smg5	exon	ENSMUSG00000001415	ProperStrand	70	chr19	8798764	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-4.5052
chr2	26493366	26493476	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr7	16524171	16524197	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	2	-1.7590
chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	chr9	15118323	15118375	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-0.7371
chr3	103562582	103562672	protein_coding	Hipk1	exon	ENSMUSG00000008730	ProperStrand	23	chr11	97643001	97643080	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.2234
chr2	179322378	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr4	131865454	131865516	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-2.1424
chr10	72437414	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr2	130102034	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-1.0535
chr1	59240070	59240088	protein_coding	Als2	exon	ENSMUSG00000026024	ProperStrand	32	chr14	33005139	33005238	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-5.2021
chr6	126743580	126743598	SINE	MIRb	MIR	chr6MIRb126743454	ProperStrand	18	chr19	8963153	8963178	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.4763
chr9	64026164	64026261	protein_coding	Rpl4	utr3	ENSMUSG00000032399	ProperStrand	608	chrX	84483704	84483721	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-3.7419
chr11	69726836	69726853	protein_coding	Neurl4	utr3	ENSMUSG00000047284	ProperStrand	28	chr5	121655032	121655122	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	3	-12.3002
chr6	70794801	70794819	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chr15	5068435	5068480	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	2	-7.0839
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr7	51828028	51828044	protein_coding	Napsa	exon	ENSMUSG00000002204	ProperStrand	88	1	-5.1558
chr10	21714510	21714590	protein_coding	Sgk1	utr5	ENSMUSG00000019970	ProperStrand	55	chr19	8963064	8963154	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-6.4489
chr9	42868596	42868694	protein_coding	Arhgef12	intron	ENSMUSG00000059495	ProperStrand	16	chr4	131908236	131908284	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-9.2689
chr7	29678824	29678923	protein_coding	Actn4	utr3	ENSMUSG00000054808	ProperStrand	120	chr11	97642952	97642973	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.3798
chr11	98684266	98684353	protein_coding	Casc3	exon	ENSMUSG00000078676	ProperStrand	33	chr14	33005139	33005157	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-5.1419
chrX	40855759	40855849	LINE	L1VL4	L1	chrXL1VL440854520	NonProperStrand	1	chrX	40855918	40855998	LINE	L1_Mus2	L1	chrXL1_Mus240855859	ProperStrand	1	1	-inf
chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr9	30234926	30234943	protein_coding	Snx19	utr5	ENSMUSG00000031993	NonProperStrand	2	1	-13.8986
chr2	4829164	4829180	protein_coding	Sephs1	utr3	ENSMUSG00000026662	NonProperStrand	271	chr7	30109250	30110834	protein_coding	Sipa1l3	exon	ENSMUSG00000030583	ProperStrand	559	1	-5.8581
chr7	13516163	13516198	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr14	33005095	33005238	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	2	-1.0407
chrX	71517861	71517951	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	chr11	51551345	51551425	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	1	-1.4590
chr12	16946814	16946904	snoRNA	ENSMUSG00000064620_SNORA32	.	ENSMUSG00000064620	ProperStrand	165	chr4	131866160	131866240	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-1.9084
chr8	12637767	12639548	protein_coding	Tubgcp3	exon	ENSMUSG00000000759	ProperStrand	16	chr3	22087348	22087381	protein_coding	Tbl1xr1	exon	ENSMUSG00000027630	ProperStrand	44	4	-inf
chr7	29171541	29171558	protein_coding	Med29	utr3	ENSMUSG00000003444	NonProperStrand	134	chr8	98269959	98270062	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	8	-18.9554
chr10	116524796	116524856	protein_coding	Frs2	intron	ENSMUSG00000020170	ProperStrand	10	chr9	39358287	39358304	protein_coding	Olfr958	exon	ENSMUSG00000050853	NonProperStrand	266	1	-13.9952
chr17	46814084	46814100	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr1	108286254	108286275	protein_coding	Phlpp1	exon	ENSMUSG00000044340	ProperStrand	67	1	-9.0092
chr5	142861180	142861202	Low_complexity	GC_rich	Low_complexity	chr5GC_rich142861178	NonProperStrand	3	chr7	116664809	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-inf
chr7	138277354	138277371	protein_coding	Fgfr2	intron	ENSMUSG00000030849	NonProperStrand	95	chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	1	-10.5114
chr12	113975537	113976053	protein_coding	AW555464	exon	ENSMUSG00000072825	ProperStrand	96	chr9	120038615	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-3.9746
chr4	34757785	34757917	protein_coding	Zfp292	exon	ENSMUSG00000039967	ProperStrand	45	chr18	73693165	73693189	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	4	-18.2697
chr14	99701353	99701468	protein_coding	Klf5	exon	ENSMUSG00000005148	ProperStrand	39	chr10	23505152	23505258	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-3.4292
chr11	102061895	102061975	protein_coding-noncoding	Hdac5	utr3	ENSMUSG00000008855	NonProperStrand	1	chr11	102062093	102062183	protein_coding	Hdac5	intron	ENSMUSG00000008855	NonProperStrand	39	1	-inf
chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr12	85350481	85350499	protein_coding	Acot1	utr5	ENSMUSG00000072949	ProperStrand	72	2	-5.5847
chr4	43789541	43789631	LINE	Lx5	L1	chr4Lx543789447	ProperStrand	1	chr4	43789358	43789438	SINE	B1_Mus1	Alu	chr4B1_Mus143789350	NonProperStrand	1	1	-inf
chr12	12948455	12948555	protein_coding	Mycn	utr5	ENSMUSG00000037169	ProperStrand	24	chr16	23110984	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.3518
chr9	96096735	96101602	protein_coding	Tfdp2	utr5	ENSMUSG00000032411	ProperStrand	95	chr4	131865869	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-4.9968
chr12	56017764	56017864	protein_coding	Baz1a	exon	ENSMUSG00000035021	ProperStrand	24	chr3	95980393	95980410	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	7	-inf
chr9	106092429	106092496	protein_coding	Wdr82	utr3	ENSMUSG00000020257	ProperStrand	34	chr9	120038564	120038654	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-6.8818
chrX	67458741	67458757	LINE	Lx8	L1	chrXLx867458264	NonProperStrand	35	chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-6.9108
chr17	57136957	57136974	protein_coding	Alkbh7	exon	ENSMUSG00000002661	ProperStrand	2	chr6	72388908	72388925	protein_coding	Mat2a	intron	ENSMUSG00000053907	ProperStrand	51	1	-inf
chr3	108357306	108357396	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	chr1	145626072	145626152	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-0.8500
chr7	106628502	106628536	protein_coding	Rps3	exon	ENSMUSG00000030744	ProperStrand	159	chr4	123465209	123487168	protein_coding	Rhbdl2	utr5	ENSMUSG00000043333	ProperStrand	3	1	-17.8971
chrX	71517900	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	chr6	124665449	124665522	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	5	-5.9479
chr2	5832917	5832970	protein_coding	Dhtkd1	exon	ENSMUSG00000025815	ProperStrand	46	chr2	169467391	169467407	protein_coding	Tshz2	intron	ENSMUSG00000047907	ProperStrand	14	1	-16.9139
chr16	33961768	33961831	protein_coding	Umps	exon	ENSMUSG00000022814	ProperStrand	20	chr8	126957706	126957723	protein_coding	Pgbd5	utr5	ENSMUSG00000050751	ProperStrand	20	1	-17.5916
chr1	162967511	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	chr1	145626057	145626197	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	9	-8.0075
chr18	36950181	36950301	protein_coding	Hars2	intron	ENSMUSG00000019143	ProperStrand	8	chr10	60243353	60243371	protein_coding	Unc5b	intron	ENSMUSG00000020099	ProperStrand	25	1	-18.7520
chr7	129059283	129060041	protein_coding	Scnn1b	exon	ENSMUSG00000030873	ProperStrand	26	chr16	23110455	23110475	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.9778
chr3	130400476	130400566	protein_coding	Ostc	intron	ENSMUSG00000041084	ProperStrand	10	chr10	23505196	23505276	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.3364
chr14	65503128	65503144	protein_coding	Hmbox1	intron	ENSMUSG00000021972	NonProperStrand	17	chr2	26493366	26493482	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	6	-inf
chr6	71832580	71832660	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	chr8	34802325	34802415	snoRNA	ENSMUSG00000088856_SNORA48	.	ENSMUSG00000088856	ProperStrand	236	1	-3.0299
chr7	116665144	116665219	protein_coding	Rpl27a	exon	ENSMUSG00000046364	ProperStrand	149	chr6	124665332	124665360	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	1	-5.1490
chr3	143865332	143865349	protein_coding	Lmo4	intron	ENSMUSG00000028266	ProperStrand	10	chr1	91790338	91790354	protein_coding	Agap1	utr3	ENSMUSG00000055013	ProperStrand	229	1	-14.2962
chr16	42539763	42539780	LINE	L2a	L2	chr16L2a42539730	NonProperStrand	11	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-11.1946
chr7	52378417	52378481	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	chr9	15118245	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	3	-1.0138
chr15	9144446	9144526	LTR	ETnERV3-int	ERVK	chr15ETnERV3-int9143475	NonProperStrand	1	chr7	145067450	145067540	Other	RMER1A	Other	chr7RMER1A145066690	NonProperStrand	1	1	-inf
chr2	33013309	33013325	protein_coding	Ralgps1	exon	ENSMUSG00000038831	NonProperStrand	24	chr5	121655031	121655062	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.5126
chr17	46804626	46804645	protein_coding	Rrp36	utr3	ENSMUSG00000023971	ProperStrand	4	chr7	116664794	116664922	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-7.9535
chr8	96703204	96703783	protein_coding	Mt1	exon	ENSMUSG00000031765	ProperStrand	92	chr4	131908236	131908277	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.8590
chr17	37200308	37200443	protein_coding	Gabbr1	intron	ENSMUSG00000024462	ProperStrand	27	chr18	73693169	73693186	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-7.1081
chr17	28465964	28466322	protein_coding	Rpl10a	exon	ENSMUSG00000037805	ProperStrand	121	chr2	153050783	153050799	protein_coding	Tspyl3	exon	ENSMUSG00000074671	ProperStrand	228	1	-9.2296
chr17	45707747	45708038	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr6	66486024	66486063	protein_coding	Mad2l1	exon	ENSMUSG00000029910	ProperStrand	7	1	-11.1351
chr11	84339166	84339183	antisense	1500016L03Rik	.	ENSMUSG00000087211	ProperStrand	4	chr9	59519386	59519469	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	1	-12.8409
chr6	87769189	87769558	protein_coding	Isy1	exon	ENSMUSG00000030056	ProperStrand	172	chr19	8963027	8963081	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-0.7729
chr17	31242544	31243027	protein_coding	Abcg1	exon	ENSMUSG00000024030	ProperStrand	36	chr16	23111754	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.7618
chr19	8986375	8986406	protein_coding	Ganab	exon	ENSMUSG00000071650	ProperStrand	145	chr3	123210911	123210975	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-1.6720
chr11	23184924	23185072	protein_coding	Xpo1	exon	ENSMUSG00000020290	ProperStrand	123	chr1	53924798	53924815	protein_coding	Hecw2	intron	ENSMUSG00000042807	ProperStrand	39	1	-12.7413
chr2	156846456	156846478	protein_coding	9830001H06Rik	exon	ENSMUSG00000055485	NonProperStrand	5	chr16	23111447	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-5.8178
chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr11	6520378	6520443	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	9	-4.4764
chr6	127837066	127837083	LTR	MTEa	MaLR	chr6MTEa127836769	ProperStrand	9	chr4	131908300	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.8019
chr3	121160265	121160559	protein_coding	Cnn3	utr3	ENSMUSG00000053931	ProperStrand	77	chr15	79913288	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	6	-16.7896
chr2	29014439	29014455	protein_coding	Setx	exon	ENSMUSG00000043535	ProperStrand	187	chr5	23031348	23031364	protein_coding	Srpk2	exon	ENSMUSG00000062604	ProperStrand	51	1	-11.3605
chr2	125571585	125571675	protein_coding	Secisbp2l	exon	ENSMUSG00000035093	ProperStrand	26	chr2	32818807	32818887	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-7.1298
chr6	124760941	124760959	protein_coding	Tpi1	utr3	ENSMUSG00000023456	ProperStrand	94	chr1	155325224	155326000	protein_coding	Dhx9	exon	ENSMUSG00000042699	ProperStrand	98	3	-18.9288
chr16	8346514	8346532	LTR	MLT1D	MaLR	chr16MLT1D8346330	ProperStrand	2	chr10	23505239	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-8.0476
chr10	43608851	43608909	protein_coding	Qrsl1	exon	ENSMUSG00000019863	ProperStrand	2	chr17	24857750	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-9.4368
chr11	101438560	101439320	protein_coding	Nbr1	exon	ENSMUSG00000017119	ProperStrand	91	chr11	6428060	6428150	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	4	-8.8941
chr13	107737212	107737228	protein_coding	Dimt1	utr5	ENSMUSG00000021692	ProperStrand	185	chr9	120040191	120040525	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	1	-7.2771
chr19	23239211	23239271	protein_coding	Klf9	exon	ENSMUSG00000033863	ProperStrand	83	chr8	80041484	80041501	protein_coding	Arhgap10	intron	ENSMUSG00000037148	ProperStrand	58	1	-12.7295
chr4	43505840	43505931	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr6	118980968	118980988	protein_coding	Cacna1c	intron	ENSMUSG00000051331	ProperStrand	46	2	-6.0522
chrX	11635848	11635865	protein_coding	Bcor	exon	ENSMUSG00000040363	NonProperStrand	293	chr17	35089181	35089237	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	2	-4.4558
chr18	33157688	33157705	protein_coding	Camk4	intron	ENSMUSG00000038128	NonProperStrand	42	chr11	6519809	6519912	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-8.6578
chr3	108357255	108357355	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	chr19	17900099	17900117	snoRNA	ENSMUSG00000089540_snoU13	.	ENSMUSG00000089540	ProperStrand	99	1	-3.5978
chr7	118220300	118220471	protein_coding	Eif4g2	exon	ENSMUSG00000005610	ProperStrand	134	chr2	84610283	84610363	protein_coding	Serping1	exon	ENSMUSG00000023224	ProperStrand	8	1	-15.7986
chr18	41356147	41356185	miRNA	Mir5097	dead	ENSMUSG00000093361	ProperStrand	221	chr10	44161902	44166650	protein_coding	Prdm1	exon	ENSMUSG00000038151	ProperStrand	9	1	-14.5930
chr13	9833553	9833617	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr4	132054869	132054887	protein_coding	Sesn2	exon	ENSMUSG00000028893	NonProperStrand	4	1	-10.5642
chr3	30949163	30949179	protein_coding	Prkci	exon	ENSMUSG00000037643	ProperStrand	39	chr3	68889023	68889140	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-4.0569
chr9	114471880	114471970	protein_coding	Trim71	exon	ENSMUSG00000079259	ProperStrand	162	chr8	129468793	129468872	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-2.5995
chr11	115885731	115885791	protein_coding	H3f3b	utr5	ENSMUSG00000016559	ProperStrand	76	chr4	131908264	131908354	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.0949
chr5	65779808	65782063	protein_coding	Rpl9	exon	ENSMUSG00000047215	ProperStrand	113	chr10	23505152	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	10	-11.9424
chr17	6491703	6491793	lincRNA	Gm17692	intron	ENSMUSG00000091795	ProperStrand	4	chr16	31254414	31254494	protein_coding	Ppp1r2	utr3	ENSMUSG00000047714	NonProperStrand	1	1	-inf
chrX	148731001	148731019	LINE	L1MEe	L1	chrXL1MEe148730825	ProperStrand	1	chr5	130300419	130300492	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-inf
chr16	23110980	23111012	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr5	115939525	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-3.6952
chr13	75905623	75905650	protein_coding	Ell2	intron	ENSMUSG00000001542	ProperStrand	110	chr11	69481429	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	3	-5.8310
chr9	37283037	37283058	LINE	L1MC	L1	chr9L1MC37283001	NonProperStrand	1	chr11	120152789	120152852	protein_coding	Bahcc1	utr3	ENSMUSG00000039741	ProperStrand	118	1	-inf
chr16	91405676	91405692	protein_coding	Ifnar2	utr3	ENSMUSG00000022971	NonProperStrand	23	chr11	106362638	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-9.3352
chr7	3299117	3299154	protein_coding	Myadm	utr3	ENSMUSG00000068566	ProperStrand	31	chr12	112779147	112779222	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	2	-9.8877
chr13	107737212	107737228	protein_coding	Dimt1	utr5	ENSMUSG00000021692	ProperStrand	185	chr1	153207119	153207167	protein_coding	Ivns1abp	exon	ENSMUSG00000023150	ProperStrand	51	1	-11.3823
chrX	149053837	149053952	protein_coding	Shroom2	exon	ENSMUSG00000045180	ProperStrand	9	chr1	162965980	162965998	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-7.3553
chr13	9833553	9833665	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr17	13112454	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	22	-7.8525
chr12	73895101	73895133	protein_coding	Ppm1a	utr3	ENSMUSG00000021096	ProperStrand	53	chr15	77597977	77597993	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	2	-14.3623
chr10	30320342	30320358	protein_coding	Trmt11	intron	ENSMUSG00000019792	NonProperStrand	26	chr5	134852807	134852867	protein_coding	Gtf2ird1	exon	ENSMUSG00000023079	ProperStrand	85	1	-14.3054
chr11	115999916	115999932	protein_coding	Mrpl38	exon	ENSMUSG00000020775	NonProperStrand	65	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.1314
chr5	45401533	45401623	LINE	L1Md_F2	L1	chr5L1Md_F245401408	ProperStrand	3	chrX	166414585	166414665	lincRNA	G530011O06Rik	exon	ENSMUSG00000072844	ProperStrand	1	1	-inf
chr19	43269721	43269737	protein_coding	Hpse2	intron	ENSMUSG00000074852	NonProperStrand	48	chr18	73693124	73693148	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-5.9623
chr9	120483273	120483435	protein_coding	Rpl14	exon	ENSMUSG00000025794	ProperStrand	123	chr10	110918549	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	13	-inf
chr11	59221038	59221138	protein_coding	Snap47	utr3	ENSMUSG00000009894	ProperStrand	19	chr16	23110829	23110893	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7016
chr5	143666033	143666097	protein_coding	Actb	exon	ENSMUSG00000029580	ProperStrand	446	chr2	79843543	79843559	protein_coding	Pde1a	intron	ENSMUSG00000059173	NonProperStrand	275	1	-6.2711
chr10	16844327	16844346	LINE	L1_Mur1	L1	chr10L1_Mur116843303	ProperStrand	76	chr3	123210878	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-3.1280
chr18	21054478	21054494	protein_coding	Trappc8	exon	ENSMUSG00000033382	ProperStrand	43	chr16	23111389	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-6.9908
chr4	140121138	140121154	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	chr1	162965986	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-2.1656
chr17	75198443	75198543	protein_coding	Ttc27	intron	ENSMUSG00000024078	ProperStrand	14	chr1	162966824	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-9.1944
chr1	173217898	173217915	protein_coding	Usp21	utr5	ENSMUSG00000053483	NonProperStrand	20	chr18	35716785	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.1514
chr4	53873522	53873545	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	chr5	115939525	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	2	-6.2844
chrX	71473556	71473667	protein_coding	Flna	exon	ENSMUSG00000031328	ProperStrand	134	chr16	23110530	23110578	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-3.7264
chr11	108800663	108803235	protein_coding	Axin2	exon	ENSMUSG00000000142	ProperStrand	23	chr16	19883898	19884021	protein_coding	A930003A15Rik	exon	ENSMUSG00000075330	ProperStrand	93	1	-14.3715
chr10	49845171	49845188	LINE	L1VL4	L1	chr10L1VL449844774	NonProperStrand	17	chr11	62416599	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-7.6793
chr13	9172075	9172129	protein_coding	Larp4b	utr3	ENSMUSG00000033499	ProperStrand	53	chr10	87892266	87892282	protein_coding	Gnptab	exon	ENSMUSG00000035311	ProperStrand	65	1	-13.4036
chr5	23662785	23662875	protein_coding	Klhl7	utr3	ENSMUSG00000028986	ProperStrand	5	chr3	123210895	123210975	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-6.8746
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	68922008	68922593	protein_coding	Per1	exon	ENSMUSG00000020893	ProperStrand	46	1	-4.9744
chr4	122970404	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	chr18	33954817	33954907	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	14	-8.1077
chr2	125454989	125455005	protein_coding	Shc4	utr3	ENSMUSG00000035109	ProperStrand	19	chr4	131908356	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-8.5506
chr16	11144136	11144196	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr11	6519810	6519849	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	NonProperStrand	2	1	-18.2639
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr4	131865856	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	10	-7.7836
chr9	64022871	64022923	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	chr1	9932550	9932626	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-2.6819
chr15	18896540	18896595	protein_coding	Cdh10	exon	ENSMUSG00000022321	ProperStrand	1	chr3	123210854	123210872	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-inf
chr16	57391627	57391727	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr7	116664804	116664908	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	NonProperStrand	12	2	-20.8626
chr7	137610895	137647246	protein_coding	Ate1	exon	ENSMUSG00000030850	ProperStrand	14	chr4	53873581	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	1	-12.0047
chr5	81758898	81758915	protein_coding	Lphn3	exon	ENSMUSG00000037605	ProperStrand	19	chr4	131908302	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.3472
chr15	88693082	88693111	protein_coding	Pim3	utr5	ENSMUSG00000035828	ProperStrand	66	chr5	30826108	30826126	protein_coding	Cib4	intron	ENSMUSG00000053194	NonProperStrand	2	1	-inf
chr12	50485931	50485947	protein_coding	Foxg1	exon	ENSMUSG00000020950	NonProperStrand	26	chr7	116663665	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-6.8095
chr2	83504346	83504388	protein_coding	Zc3h15	utr3	ENSMUSG00000027091	ProperStrand	37	chr10	90581034	90581141	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	2	-9.3989
chr5	145404369	145404449	SINE	B4A	B4	chr5B4A145404330	NonProperStrand	1	chr7	4939568	4939658	protein_coding	Zfp579	intron	ENSMUSG00000051550	ProperStrand	13	1	-inf
chr15	60661082	60661099	lincRNA	9930014A18Rik	exon	ENSMUSG00000044513	ProperStrand	54	chr9	64143801	64143877	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-7.9830
chr4	125732657	125732729	protein_coding	Mrps15	exon	ENSMUSG00000028861	ProperStrand	3	chrX	34622917	34622990	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-9.3485
chr10	5990660	6063975	protein_coding	Akap12	utr3	ENSMUSG00000038587	ProperStrand	1008	chr7	116663633	116663724	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	10	-1.7380
chr2	130699930	130699947	processed_transcript	A730017L22Rik	.	ENSMUSG00000085566	ProperStrand	1	chr8	32260373	32260425	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-inf
chr7	116663633	116663733	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	NonProperStrand	51	chr11	62418014	62418063	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	NonProperStrand	7	2	-inf
chr18	35965742	35965789	protein_coding	Ube2d2	utr3	ENSMUSG00000091896	ProperStrand	20	chr5	130295531	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	3	-16.8390
chr18	75161559	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	chr18	74938045	74938122	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	ProperStrand	1022	1	-1.9250
chr17	39985543	39985643	pseudogene	AY036118	.	ENSMUSG00000045999	ProperStrand	57	chr17	35089235	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	NonProperStrand	5	2	-19.0009
chr6	91003380	91003561	protein_coding	Nup210	exon	ENSMUSG00000030091	ProperStrand	140	chr15	34370584	34370664	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-2.0704
chr7	135689307	135689397	protein_coding	Bag3	exon	ENSMUSG00000030847	ProperStrand	35	chrX	34622908	34622988	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-4.1730
chr15	77597977	77597993	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr7	13516163	13516190	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	1	-4.2544
chr11	120681189	120681217	protein_coding	Fasn	exon	ENSMUSG00000025153	ProperStrand	298	chr7	117189876	117189943	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-1.6950
chr8	87501982	87501998	protein_coding	Junb	exon	ENSMUSG00000052837	NonProperStrand	3	chr16	23111769	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-7.8619
chr4	24555744	24555767	protein_coding	Klhl32	intron	ENSMUSG00000040387	ProperStrand	67	chr16	23111709	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.7307
chr1	95308950	95308979	protein_coding	Hdlbp	exon	ENSMUSG00000034088	ProperStrand	97	chr7	127123766	127123782	protein_coding	Dnahc3	intron	ENSMUSG00000052273	NonProperStrand	3	1	-19.1544
chr14	21533698	21533747	protein_coding	2310021P13Rik	exon	ENSMUSG00000021819	ProperStrand	11	chr10	87892229	87892246	protein_coding	Gnptab	exon	ENSMUSG00000035311	ProperStrand	65	1	-16.6257
chr9	30235085	30235101	protein_coding	Snx19	exon	ENSMUSG00000031993	ProperStrand	353	chr13	30633006	30633071	protein_coding	Uqcrfs1	exon	ENSMUSG00000038462	ProperStrand	24	2	-18.2073
chr6	122690005	122692398	protein_coding	Slc2a3	exon	ENSMUSG00000003153	ProperStrand	682	chr11	55296280	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	9	-18.5336
chr19	5107858	5107958	protein_coding	Klc2	utr3	ENSMUSG00000024862	ProperStrand	25	chr17	24857781	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.8692
chr19	8800358	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	chr14	33005038	33005237	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	32	-1.2071
chr4	123027315	123027415	protein_coding	Macf1	utr3	ENSMUSG00000028649	ProperStrand	320	chr8	129468797	129468870	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-1.5090
chr9	15123938	15123961	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	NonProperStrand	100	chr16	23111373	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-3.4450
chr6	122576723	122576823	protein_coding	Dppa3	intron	ENSMUSG00000046323	ProperStrand	2	chr1	162965555	162965599	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-10.5602
chr12	86474081	86474129	protein_coding	Dlst	utr3	ENSMUSG00000004789	ProperStrand	52	chr2	21005618	21005635	pseudogene	Gm13377	.	ENSMUSG00000086821	ProperStrand	15	1	-16.4597
chr4	140121137	140121154	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	chr5	121655016	121655110	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	3	-6.1356
chr13	105910839	105910861	protein_coding	4933425L06Rik	intron	ENSMUSG00000021718	ProperStrand	2	chr3	127256093	127256213	protein_coding	Larp7	utr5	ENSMUSG00000027968	NonProperStrand	2	1	-inf
chr6	131330341	131330412	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	ProperStrand	408	chr19	8799026	8799096	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-2.2826
chr18	56900416	56900469	protein_coding	Lmnb1	exon	ENSMUSG00000024590	ProperStrand	176	chr8	32260335	32260402	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-2.6524
chr12	85350481	85350499	protein_coding	Acot1	utr5	ENSMUSG00000072949	ProperStrand	72	chr10	23505152	23505266	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-1.9763
chr8	72287172	72287188	protein_coding	Zfp866	utr3	ENSMUSG00000043090	NonProperStrand	134	chr4	131865854	131865987	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	7	-8.1387
chr11	78337349	78337428	protein_coding	Tnfaip1	utr3	ENSMUSG00000017615	ProperStrand	30	chr4	131908688	131908708	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.2894
chr6	15995480	15995502	LTR	MTEb-int	MaLR	chr6MTEb-int15995271	NonProperStrand	1	chr4	131866155	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-inf
chr6	143429777	143429793	LINE	L1MA4	L1	chr6L1MA4143429728	ProperStrand	39	chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	1	-10.9430
chr11	100235672	100235698	protein_coding	Jup	exon	ENSMUSG00000001552	ProperStrand	123	chr5	130300458	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.3763
chr15	82980086	82980226	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr9	120039579	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	20	-12.1428
chr10	56108438	56108580	protein_coding	Gja1	utr3	ENSMUSG00000050953	ProperStrand	70	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.1088
chr4	43505818	43505898	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr4	155562119	155562209	protein_coding	Agrn	intron	ENSMUSG00000041936	ProperStrand	175	1	-1.3318
chr17	35379641	35379699	protein_coding	Ddx39b	utr5	ENSMUSG00000019432	ProperStrand	119	chr11	68886975	68887007	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-2.8883
chr9	44655657	44655726	protein_coding	Mll1	exon	ENSMUSG00000002028	ProperStrand	151	chr8	87368837	87369769	protein_coding	Calr	exon	ENSMUSG00000003814	ProperStrand	232	1	-8.7527
chr10	62802344	62802360	protein_coding	Sirt1	intron	ENSMUSG00000020063	NonProperStrand	116	chr5	121655016	121655127	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-4.5005
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr15	68012619	68012635	protein_coding	Zfat	exon	ENSMUSG00000022335	NonProperStrand	25	1	-9.7390
chr6	87947445	87947466	protein_coding	Gm5577	intron	ENSMUSG00000084950	NonProperStrand	4	chr12	112779228	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	2	-16.7816
chr13	113906909	113907016	LINE	L1Md_F2	L1	chr13L1Md_F2113904362	NonProperStrand	5	chr18	67806576	67806628	protein_coding	Psmg2	intron	ENSMUSG00000024537	ProperStrand	13	5	-inf
chr8	13416896	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr9	103401280	103401296	protein_coding	Tmem108	exon	ENSMUSG00000042757	NonProperStrand	323	2	-5.5413
chr11	98878344	98878466	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	chr2	91436235	91436336	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	6	-8.5362
chr1	52982095	52982136	protein_coding	1700019D03Rik	exon	ENSMUSG00000043629	ProperStrand	39	chr1	88247765	88247855	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	5	-19.3982
chr15	85411907	85411925	protein_coding	Wnt7b	utr5	ENSMUSG00000022382	ProperStrand	21	chr5	73189869	73189885	protein_coding	Tec	intron	ENSMUSG00000029217	NonProperStrand	23	1	-17.1575
chr2	76897651	76897667	protein_coding	Ccdc141	exon	ENSMUSG00000044033	ProperStrand	15	chr1	162965530	162965548	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-9.7660
chr12	30206873	30206953	LTR	MTE2a-int	MaLR	chr12MTE2a-int30206088	ProperStrand	1	chr12	30207021	30207111	LTR	MTE2a	MaLR	chr12MTE2a30207014	ProperStrand	1	1	-inf
chrX	82449812	82449898	protein_coding	Dmd	utr3	ENSMUSG00000045103	ProperStrand	38	chr7	116663634	116663724	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-8.3875
chr8	108048557	108048609	protein_coding	Atp6v0d1	utr3	ENSMUSG00000013160	ProperStrand	35	chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	1	-9.8758
chr4	45529398	45529416	protein_coding	Shb	intron	ENSMUSG00000044813	ProperStrand	32	chr3	68889088	68889146	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-4.4346
chr9	110671758	110671777	protein_coding	Myl3	intron	ENSMUSG00000059741	ProperStrand	2	chr16	23110911	23111001	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr11	67182895	67184426	protein_coding	Myh13	exon	ENSMUSG00000060180	ProperStrand	145	chr16	23110527	23110581	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.1141
chr16	91657875	91657975	protein_coding	Son	exon	ENSMUSG00000022961	ProperStrand	59	chr13	49779780	49779802	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	2	-11.3385
chr15	79913296	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr4	57706987	57707003	protein_coding	Palm2	intron	ENSMUSG00000090053	NonProperStrand	187	1	-1.6539
chr5	121655016	121655099	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	chr2	65966231	65966267	snoRNA	ENSMUSG00000088306_SNORD26	.	ENSMUSG00000088306	ProperStrand	3	1	-9.9796
chr6	38461895	38461912	protein_coding	Ubn2	utr3	ENSMUSG00000038538	ProperStrand	86	chr10	23505155	23505201	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-0.7843
chr12	32005881	32005897	protein_coding	Lamb1	exon	ENSMUSG00000002900	ProperStrand	87	chr7	134671387	134671521	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-7.1319
chr1	75192490	75192506	processed_transcript	Ankzf1	.	ENSMUSG00000026199	ProperStrand	69	chr7	118187167	118187199	protein_coding	Ctr9	exon	ENSMUSG00000005609	ProperStrand	21	1	-15.1495
chr10	60561653	60561713	protein_coding	Sgpl1	utr3	ENSMUSG00000020097	ProperStrand	34	chr7	16534823	16534839	protein_coding	Ehd2	utr3	ENSMUSG00000074364	NonProperStrand	197	1	-12.0748
chr11	68067261	68067277	protein_coding	Ntn1	intron	ENSMUSG00000020902	NonProperStrand	194	chr7	29136525	29136575	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-1.4578
chr8	109566950	109568373	protein_coding	Vps4a	exon	ENSMUSG00000031913	ProperStrand	10	chr6	121423179	121423195	protein_coding	Iqsec3	utr5	ENSMUSG00000040797	NonProperStrand	139	1	-15.2750
chr16	94791781	94791857	protein_coding	Dyrk1a	utr5	ENSMUSG00000022897	ProperStrand	17	chr10	23506278	23506314	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-9.4921
chr10	127997240	127997340	protein_coding	Pa2g4	exon	ENSMUSG00000025364	ProperStrand	72	chr7	29136525	29136575	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.0629
chr16	57391758	57391792	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr17	24856619	24856667	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-1.4404
chr1	191790774	191790854	LINE	HAL1	L1	chr1HAL1191790574	NonProperStrand	1	chr1	191790979	191791069	LINE	HAL1	L1	chr1HAL1191790987	NonProperStrand	1	1	-inf
chr19	4739988	4742382	protein_coding	Spnb3	exon	ENSMUSG00000067889	ProperStrand	19	chr7	29136621	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.4734
chr16	17894461	17894477	protein_coding	Tssk1	exon	ENSMUSG00000041566	NonProperStrand	62	chr19	8963154	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.2203
chr9	45935145	45963540	protein_coding	Sik3	exon	ENSMUSG00000034135	ProperStrand	49	chr11	97642998	97643078	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	4	-9.9457
chr16	8690461	8690561	protein_coding	Usp7	utr3	ENSMUSG00000022710	ProperStrand	118	chr11	106362669	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-6.0663
chr16	93192527	93192546	SINE	RSINE1	B4	chr16RSINE193192531	ProperStrand	8	chr19	48036886	48036904	protein_coding	Ccdc147	exon	ENSMUSG00000046585	NonProperStrand	3	1	-21.9894
chr10	128062272	128062322	protein_coding	Rps26	exon	ENSMUSG00000025362	ProperStrand	67	chr1	65400989	65401008	protein_coding	Pth2r	intron	ENSMUSG00000025946	ProperStrand	4	1	-18.4725
chr11	115935746	115937022	protein_coding	Unc13d	exon	ENSMUSG00000057948	ProperStrand	89	chr16	23110828	23110957	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-0.6946
chr2	75499856	75501633	protein_coding	Hnrnpa3	exon	ENSMUSG00000059005	ProperStrand	289	chr3	123210855	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	9	-6.9665
chr9	59516866	59518323	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr16	20684311	20684387	snoRNA	ENSMUSG00000077239_Snord66	.	ENSMUSG00000077239	ProperStrand	159	1	-5.2625
chr10	75322118	75322889	protein_coding	Mif	exon	ENSMUSG00000033307	ProperStrand	146	chr16	23111754	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-3.6355
chr2	23923593	23923683	LINE	Lx6	L1	chr2Lx623922977	NonProperStrand	1	chr2	23923696	23923776	LINE	Lx6	L1	chr2Lx623923694	NonProperStrand	1	1	-inf
chr16	57157616	57159532	protein_coding	Nit2	exon	ENSMUSG00000022751	ProperStrand	6	chr7	29136573	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-6.8330
chr1	72290909	72290974	snRNA	ENSMUSG00000093111_AC120136.1	.	ENSMUSG00000093111	ProperStrand	137	chr11	69481432	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-1.8008
chr10	90585557	90585619	protein_coding-noncoding	Slc25a3	utr3	ENSMUSG00000061904	ProperStrand	13	chr16	23111484	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-13.1697
chr3	8929825	8944694	protein_coding	Tpd52	utr3	ENSMUSG00000027506	ProperStrand	37	chr10	23505163	23505270	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	7	-15.1831
chr4	126430889	126430906	protein_coding	AU040320	utr5	ENSMUSG00000028830	NonProperStrand	12	chr16	23110902	23110956	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.4686
chr11	40493382	40493473	protein_coding	Mat2b	utr3	ENSMUSG00000042032	ProperStrand	1	chr18	35716831	35716847	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-inf
chr11	97028882	97028937	protein_coding	Kpnb1	exon	ENSMUSG00000001440	ProperStrand	197	chr3	88497855	88497945	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	3	-12.0009
chr12	3968611	3968627	protein_coding	Efr3b	exon	ENSMUSG00000020658	ProperStrand	142	chr16	57122222	57133200	protein_coding	Tomm70a	exon	ENSMUSG00000022752	ProperStrand	82	1	-10.9561
chr4	151730301	151730737	protein_coding	Chd5	exon	ENSMUSG00000005045	NonProperStrand	147	chr19	8963137	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-1.9028
chr1	91955968	91955993	protein_coding	Iqca	intron	ENSMUSG00000026301	ProperStrand	13	chr9	88276657	88276921	protein_coding	Snx14	exon	ENSMUSG00000032422	ProperStrand	13	1	-19.5278
chr9	120038560	120038588	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	chr11	69164020	69164120	snoRNA	ENSMUSG00000087881_SCARNA21	.	ENSMUSG00000087881	ProperStrand	261	1	-0.8022
chr11	102294589	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr11	74718949	74719010	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	1	-4.6781
chr1	60647411	60647491	LINE	Lx5	L1	chr1Lx560647382	NonProperStrand	1	chr1	60647725	60647815	LINE	Lx6	L1	chr1Lx660647525	ProperStrand	1	1	-inf
chr7	3607179	3607279	protein_coding	Cnot3	exon	ENSMUSG00000035632	ProperStrand	55	chr15	79913288	79913334	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-3.7538
chr10	92773877	92773893	Simple_repeat	(CCCG)n	Simple_repeat	chr10(CCCG)n92773837	NonProperStrand	2	chr11	69481335	69481465	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-10.4764
chrX	70237450	70237471	miRNA	Mir2137	.	ENSMUSG00000089357	ProperStrand	50	chr2	26768067	26768120	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	2	-13.9121
chr10	60294003	60294020	protein_coding	Unc5b	utr5	ENSMUSG00000020099	ProperStrand	25	chr2	130103751	130103783	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-10.2383
chr11	62416575	62416598	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr19	8799830	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-1.2066
chr5	100855902	100855933	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr2	25303399	25303461	protein_coding	Abca2	utr3	ENSMUSG00000026944	ProperStrand	57	2	-10.8763
chr2	146125209	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	chrX	34622906	34622973	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-1.3404
chr15	99236609	99237054	protein_coding	Tmbim6	exon	ENSMUSG00000023010	ProperStrand	64	chr12	106269445	106269509	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	2	-6.7530
chr14	71295884	71301302	protein_coding	Gfra2	exon	ENSMUSG00000022103	ProperStrand	26	chr17	23965846	23965907	protein_coding	Tceb2	exon	ENSMUSG00000055839	ProperStrand	12	1	-18.1869
chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr7	116664794	116664925	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	8	-1.0820
chr6	128322002	128322018	protein_coding	Foxm1	exon	ENSMUSG00000001517	NonProperStrand	66	chr16	23111384	23111418	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.1306
chr4	155386436	155386452	protein_coding	Sdf4	utr3	ENSMUSG00000029076	ProperStrand	20	chr16	23111754	23111828	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.8417
chr3	36882461	36885926	protein_coding	4932438A13Rik	exon	ENSMUSG00000037270	ProperStrand	96	chr16	23111772	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-2.3339
chr9	92440258	92440274	protein_coding	Plod2	intron	ENSMUSG00000032374	ProperStrand	52	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.9942
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr9	57793253	57793269	protein_coding	Sema7a	intron	ENSMUSG00000038264	NonProperStrand	13	1	-11.8280
chr12	76464430	76464446	protein_coding	Rhoj	intron	ENSMUSG00000046768	NonProperStrand	9	chr9	120039563	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-7.0468
chr2	165876982	165877188	protein_coding	Ncoa3	exon	ENSMUSG00000027678	ProperStrand	58	chr2	26494761	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	7	-19.1919
chr3	104597296	104597340	protein_coding	Rhoc	utr3	ENSMUSG00000002233	ProperStrand	41	chr2	130101983	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-6.1048
chr15	94602149	94602167	protein_coding	Tmem117	intron	ENSMUSG00000063296	NonProperStrand	31	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.5161
chr5	87240280	87240332	protein_coding	Ythdc1	intron	ENSMUSG00000035851	ProperStrand	45	chr11	77996560	77996603	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	3	-15.1664
chr2	90235286	90235346	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	131908683	131908907	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	96	-0.9059
chr1	59748785	59748851	snoRNA	ENSMUSG00000077345_Snord70	.	ENSMUSG00000077345	ProperStrand	61	chr11	69483136	69483192	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.4217
chr7	134336953	134338595	protein_coding	Cd2bp2	exon	ENSMUSG00000042502	ProperStrand	73	chr16	23110913	23111010	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-2.5327
chr14	8700112	8700212	protein_coding	Flnb	exon	ENSMUSG00000025278	ProperStrand	124	chr17	35087897	35087946	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-3.8165
chr4	153339354	153339413	protein_coding	Dffb	utr3	ENSMUSG00000029027	ProperStrand	5	chr17	24857715	24857775	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	5	-inf
chr3	88497853	88497943	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	chr17	24856652	24856700	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-1.2068
chr15	76005537	76005553	protein_coding	Plec	exon	ENSMUSG00000022565	ProperStrand	186	chrX	158280997	158281016	protein_coding	Nhs	exon	ENSMUSG00000059493	ProperStrand	16	1	-13.7347
chr4	43505657	43505730	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr4	130372845	130374564	protein_coding	Sdc3	exon	ENSMUSG00000025743	ProperStrand	7	1	-7.3054
chr12	8725285	8725359	protein_coding	Pum2	intron	ENSMUSG00000020594	ProperStrand	39	chr11	69483190	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-8.1480
chr11	72806058	72806126	protein_coding	Atp2a3	utr3	ENSMUSG00000020788	ProperStrand	29	chr9	64022873	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-9.4888
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr9	59522368	59522471	protein_coding	Pkm2	intron	ENSMUSG00000032294	ProperStrand	1296	2	-1.9459
chr7	149170854	149171339	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	chr5	23358036	23358098	snoRNA	ENSMUSG00000093321_Snord93	.	ENSMUSG00000093321	ProperStrand	218	2	-13.7596
chr2	104500816	104503495	protein_coding	Cstf3	exon	ENSMUSG00000027176	ProperStrand	19	chr18	22680891	22680907	protein_coding	Asxl3	exon	ENSMUSG00000045215	ProperStrand	9	1	-19.6683
chr17	69573538	69573555	protein_coding	Epb4.1l3	intron	ENSMUSG00000024044	ProperStrand	28	chr11	106362361	106362377	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-7.3584
chr8	77742558	77742574	protein_coding	Rasd2	exon	ENSMUSG00000034472	NonProperStrand	237	chr7	29136525	29136586	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-1.1026
chr6	6059222	6059295	protein_coding	Slc25a13	exon	ENSMUSG00000015112	ProperStrand	78	chr16	23111721	23111811	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	5	-8.1949
chr5	76033355	76033390	protein_coding	Kit	exon	ENSMUSG00000005672	ProperStrand	58	chr9	21446874	21446938	protein_coding	Smarca4	exon	ENSMUSG00000032187	ProperStrand	196	1	-11.0075
chr6	92104375	92104391	protein_coding	Nr2c2	exon	ENSMUSG00000005893	ProperStrand	101	chr14	25283505	25283558	protein_coding	Polr3a	exon	ENSMUSG00000025280	ProperStrand	11	1	-15.7274
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr3	66790039	66790055	protein_coding	Rsrc1	utr5	ENSMUSG00000034544	NonProperStrand	71	1	-4.1428
chr4	68423440	68423456	protein_coding	Dbc1	exon	ENSMUSG00000028351	ProperStrand	78	chr16	23110529	23110577	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.0259
chr4	137309903	137311059	protein_coding	Alpl	exon	ENSMUSG00000028766	ProperStrand	80	chr8	36529522	36529538	protein_coding	Eri1	utr3	ENSMUSG00000031527	NonProperStrand	97	1	-11.7702
chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	chr4	126559848	126566767	protein_coding	Zmym4	exon	ENSMUSG00000042446	ProperStrand	94	1	-11.6634
chr8	115395545	115395564	protein_coding	Cntnap4	intron	ENSMUSG00000031772	NonProperStrand	5	chr13	64252047	64252117	protein_coding	Zfp367	intron	ENSMUSG00000044934	ProperStrand	34	1	-18.9946
chr13	47180750	47180834	protein_coding	Dek	utr3	ENSMUSG00000021377	ProperStrand	36	chr7	52381973	52381998	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-7.7315
chr5	54389949	54389965	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	chr1	92698923	92698940	protein_coding	Col6a3	exon	ENSMUSG00000048126	NonProperStrand	44	1	-11.4070
chr8	127951421	127951480	protein_coding	Sipa1l2	intron	ENSMUSG00000001995	ProperStrand	37	chr16	23111455	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-3.6133
chr11	62416575	62418033	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr11	69483136	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	16	-12.9518
chr3	113827103	113827119	protein_coding	Col11a1	utr3	ENSMUSG00000027966	NonProperStrand	139	chr5	121655100	121655153	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.2584
chr2	147009105	147009122	protein_coding	Nkx2-2	utr3	ENSMUSG00000027434	NonProperStrand	84	chr4	134881011	134881098	protein_coding	Srrm1	exon	ENSMUSG00000028809	ProperStrand	142	2	-17.2329
chr14	67434358	67434389	protein_coding	Dpysl2	exon	ENSMUSG00000022048	ProperStrand	36	chr12	88488443	88496424	protein_coding	Pomt2	exon	ENSMUSG00000034126	NonProperStrand	331	1	-10.9218
chr12	56591465	56591512	protein_coding	Nfkbia	exon	ENSMUSG00000021025	ProperStrand	11	chr7	29136611	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-9.2229
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	1	-4.9522
chr11	51805415	51805434	protein_coding	Ube2b	intron	ENSMUSG00000020390	ProperStrand	57	chr5	130295414	130295512	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	2	-8.7762
chr7	31743277	31743343	protein_coding	Lsr	exon	ENSMUSG00000001247	ProperStrand	8	chr3	157729963	157729979	protein_coding	Lrrc40	utr3	ENSMUSG00000063052	ProperStrand	147	1	-15.6303
chr4	140517319	140517360	protein_coding	Sdhb	exon	ENSMUSG00000009863	ProperStrand	14	chr11	69483193	69483282	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-5.1730
chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	chr7	4691730	4691754	protein_coding	Suv420h2	utr5	ENSMUSG00000059851	NonProperStrand	70	1	-7.4201
chr13	44998370	44998460	protein_coding	Jarid2	exon	ENSMUSG00000038518	ProperStrand	372	chr15	34370597	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-0.7229
chr8	125021799	125021845	protein_coding	Fam38a	exon	ENSMUSG00000014444	ProperStrand	132	chr8	86464505	86464522	protein_coding	Gm10644	intron	ENSMUSG00000074219	ProperStrand	18	1	-14.1656
chr8	74992154	74992329	protein_coding	Cherp	exon	ENSMUSG00000052488	ProperStrand	43	chr4	131908723	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-3.1637
chr2	67182901	67182918	antisense	Gm13599	.	ENSMUSG00000087043	ProperStrand	1	chr10	81024045	81026870	protein_coding	Aes	exon	ENSMUSG00000054452	ProperStrand	34	1	-inf
chr19	4296560	4296676	protein_coding	Adrbk1	intron	ENSMUSG00000024858	ProperStrand	37	chr10	127527165	127527197	protein_coding	Atp5b	utr3	ENSMUSG00000025393	ProperStrand	612	1	-9.6390
chr19	5796916	5797015	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr6	94776857	94776875	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	1	-3.4784
chr16	23110525	23110593	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr7	31411074	31411101	protein_coding	Cox6b1	utr5	ENSMUSG00000036751	ProperStrand	23	1	-10.9523
chr11	33055035	33055096	protein_coding	Npm1	utr3	ENSMUSG00000057113	ProperStrand	352	chr4	122968617	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-2.9288
chr4	134926614	134927796	protein_coding	A330049M08Rik	exon	ENSMUSG00000043924	ProperStrand	130	chr18	73693168	73693188	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-4.0399
chr17	34021741	34021841	protein_coding	Kifc1	exon	ENSMUSG00000079553	ProperStrand	47	chr1	161270490	161270558	snoRNA	ENSMUSG00000089536_Scarna3a	.	ENSMUSG00000089536	ProperStrand	247	1	-10.9684
chr4	135420223	135420240	protein_coding	Srsf10	utr3	ENSMUSG00000028676	ProperStrand	31	chr2	180510920	180510937	protein_coding	Bhlhe23	exon	ENSMUSG00000045493	NonProperStrand	28	1	-16.1608
chr10	107769752	107769776	protein_coding	Pawr	utr5	ENSMUSG00000035873	ProperStrand	39	chr2	53003875	53003891	protein_coding	Prpf40a	exon	ENSMUSG00000061136	ProperStrand	129	1	-12.6460
chr14	19101593	19101693	protein_coding	Rpl15	exon	ENSMUSG00000012405	ProperStrand	145	chr2	130102043	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-3.6761
chr9	108389481	108389670	protein_coding	Lamb2	exon	ENSMUSG00000052911	ProperStrand	35	chr4	131908814	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.0337
chr14	55087100	55087182	protein_coding	Lrp10	exon	ENSMUSG00000022175	ProperStrand	19	chr4	130219315	130219333	protein_coding	Pum1	utr5	ENSMUSG00000028580	NonProperStrand	5	1	-19.6020
chr2	84578358	84578379	protein_coding	Ypel4	utr3	ENSMUSG00000034059	ProperStrand	2	chr1	89673672	89673762	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	NonProperStrand	27	1	-21.0126
chr2	143815667	143815747	protein_coding	Rrbp1	exon	ENSMUSG00000027422	ProperStrand	76	chr11	69483159	69483250	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.0566
chr2	167836657	167836681	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	chr9	40762540	40762559	protein_coding	4931429I11Rik	intron	ENSMUSG00000032023	NonProperStrand	49	1	-12.5414
chr10	77498289	77498319	protein_coding-noncoding	Aire	utr3	ENSMUSG00000000731	ProperStrand	5	chr11	120209394	120209779	protein_coding	Actg1	utr5	ENSMUSG00000062825	ProperStrand	178	1	-16.2257
chr2	158185554	158185644	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr4	86232407	86232487	snoRNA	ENSMUSG00000088958_Scarna8	.	ENSMUSG00000088958	ProperStrand	366	1	-3.0448
chr15	37933888	37934058	protein_coding	Ubr5	exon	ENSMUSG00000037487	ProperStrand	258	chr1	162968465	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	5	-14.1190
chr13	38605011	38610919	protein_coding	Txndc5	exon	ENSMUSG00000038991	ProperStrand	48	chr2	158185581	158185655	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	2	-11.1667
chr2	160191558	160191574	protein_coding	Mafb	exon	ENSMUSG00000074622	ProperStrand	31	chr19	8800388	8800478	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-4.7823
chr2	79132657	79132674	protein_coding-noncoding	Itga4	utr5	ENSMUSG00000027009	NonProperStrand	118	chr9	78215842	78215893	protein_coding	Dppa5a	exon	ENSMUSG00000060461	ProperStrand	79	2	-17.9372
chr3	88603799	88603902	pseudogene	5830417I10Rik	.	ENSMUSG00000078684	ProperStrand	68	chr4	131865928	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-4.5791
chr14	56159296	56159313	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	chr9	120039565	120039621	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.3665
chr8	73419657	73419774	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	chr1	162966812	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	15	-2.1541
chr8	122042730	122042820	protein_coding	Mbtps1	intron	ENSMUSG00000031835	ProperStrand	81	chr8	107971791	107971871	protein_coding	Lrrc36	intron	ENSMUSG00000054320	ProperStrand	5	1	-17.6736
chr8	108049252	108049310	protein_coding	Atp6v0d1	exon	ENSMUSG00000013160	ProperStrand	35	chr16	23111770	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.8115
chr7	28045885	28045985	protein_coding-noncoding	Numbl	utr5	ENSMUSG00000063160	ProperStrand	4	chr18	35716834	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-7.5042
chr7	106646238	106646280	rRNA	n-R5s156	.	ENSMUSG00000065311	ProperStrand	8	chr15	98356821	98356843	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	2	-18.2715
chr11	116535927	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-1.1255
chr12	83272820	83272837	protein_coding	Sipa1l1	intron	ENSMUSG00000042700	NonProperStrand	12	chr16	23110529	23110558	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.4970
chr3	116593922	116595904	protein_coding	Frrs1	intron	ENSMUSG00000033386	ProperStrand	27	chr3	123210854	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	4	-11.7814
chr3	83742602	83742618	protein_coding	D930015E06Rik	exon	ENSMUSG00000033767	ProperStrand	17	chr9	118465025	118465098	protein_coding	Golga4	utr3	ENSMUSG00000038708	ProperStrand	95	1	-14.9508
chr7	30043447	30043513	protein_coding	Spint2	exon	ENSMUSG00000074227	ProperStrand	82	chr4	122970472	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-6.7941
chr5	52561293	52561309	protein_coding	Dhx15	exon	ENSMUSG00000029169	ProperStrand	53	chr17	35088957	35089015	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	2	-9.9322
chr16	5019028	5019082	protein_coding	Glyr1	exon	ENSMUSG00000022536	ProperStrand	60	chr7	52382752	52382806	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	3	-15.3219
chr5	100855944	100855975	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr6	24520720	24520737	protein_coding	Asb15	exon	ENSMUSG00000029685	ProperStrand	3	1	-12.9864
chr9	60719914	60719930	protein_coding	Uaca	exon	ENSMUSG00000034485	ProperStrand	109	chr15	37958433	37958449	protein_coding	Ubr5	exon	ENSMUSG00000037487	ProperStrand	258	1	-9.1919
chr4	21200739	21200760	LINE	Lx3C	L1	chr4Lx3C21200117	NonProperStrand	7	chr4	135568794	135570355	protein_coding	Tceb3	exon	ENSMUSG00000028668	ProperStrand	17	7	-inf
chr2	90235295	90235341	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	75023225	75024491	protein_coding	Birc6	exon	ENSMUSG00000024073	ProperStrand	110	1	-3.3307
chr10	15353292	15353383	LINE	L1Md_Gf	L1	chr10L1Md_Gf15350584	ProperStrand	1	chr10	27945015	27945105	protein_coding	Ptprk	intron	ENSMUSG00000019889	NonProperStrand	24	1	-inf
chr5	148113281	148113297	protein_coding	Cdx2	utr3	ENSMUSG00000029646	ProperStrand	276	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-2.3914
chr19	8946074	8946175	protein_coding	Ubxn1	utr5	ENSMUSG00000071655	ProperStrand	68	chr4	131865391	131865458	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-3.7679
chr16	20645718	20645734	protein_coding	Ece2	utr3	ENSMUSG00000022842	NonProperStrand	4	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-14.6015
chr2	71085921	71085937	protein_coding	Dync1i2	exon	ENSMUSG00000027012	NonProperStrand	58	chr16	23111447	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.3059
chr14	99500467	99504425	protein_coding	Pibf1	exon	ENSMUSG00000022064	ProperStrand	32	chr11	97642980	97643074	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	12	-inf
chr6	125112684	125115291	protein_coding	Gapdh	exon	ENSMUSG00000057666	ProperStrand	356	chr11	69483136	69483244	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-1.1060
chr4	134082041	134082065	protein_coding	Fam54b	utr3	ENSMUSG00000046671	ProperStrand	10	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.5892
chr18	37911790	37911806	protein_coding	Pcdhga9	intron	ENSMUSG00000023036	ProperStrand	245	chr5	74987921	74987952	protein_coding	Fip1l1	exon	ENSMUSG00000029227	ProperStrand	102	1	-9.4278
chr5	65952377	65952395	protein_coding	Ube2k	intron	ENSMUSG00000029203	ProperStrand	289	chr19	8963027	8963127	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-1.3211
chr13	112540780	112541440	protein_coding	Map3k1	exon	ENSMUSG00000021754	ProperStrand	113	chr9	50816824	50816841	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	1	-10.5366
chr4	131782147	131782232	protein_coding	Gmeb1	exon	ENSMUSG00000028901	ProperStrand	15	chr2	158182156	158182194	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	6	-21.2072
chr1	89673471	89673548	protein_coding	Atg16l1	intron	ENSMUSG00000026289	ProperStrand	41	chr12	103604268	103604285	protein_coding	Rin3	intron	ENSMUSG00000044456	ProperStrand	26	1	-15.7906
chr7	80596602	80596631	protein_coding	Chd2	exon	ENSMUSG00000078671	ProperStrand	69	chr4	131908236	131908288	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.2232
chr5	114195709	114221544	protein_coding	Sart3	exon	ENSMUSG00000018974	ProperStrand	50	chr18	35714196	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	6	-19.5888
chr14	76555780	76555798	LTR	MERVL_2A-int	ERVL	chr14MERVL_2A-int76555434	ProperStrand	1	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-inf
chr7	151703548	151703648	protein_coding	Ppfia1	exon	ENSMUSG00000037519	ProperStrand	32	chr10	90581493	90581529	protein_coding	Slc25a3	exon	ENSMUSG00000061904	ProperStrand	74	1	-14.1632
chr8	108233711	108233730	protein_coding	4933405L10Rik	exon	ENSMUSG00000013158	ProperStrand	94	chr19	8800355	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	3	-7.0652
chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	chr17	46823304	46823356	protein_coding	Ppp2r5d	exon	ENSMUSG00000059409	ProperStrand	97	1	-7.8689
chr17	88385731	88385808	protein_coding	Msh6	exon	ENSMUSG00000005370	ProperStrand	150	chr9	15119647	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	8	-13.1131
chr10	72437415	72437431	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	1	-4.0146
chr1	167693952	167694037	protein_coding	Creg1	exon	ENSMUSG00000040713	ProperStrand	3	chr2	63936035	63936053	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	2	-20.9894
chr5	136707645	136707662	protein_coding	Sh2b2	exon	ENSMUSG00000005057	NonProperStrand	101	chr9	58159696	58159713	protein_coding	Loxl1	exon	ENSMUSG00000032334	NonProperStrand	13	1	-15.3963
chr9	40611929	40612253	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr19	17900101	17900117	snoRNA	ENSMUSG00000089540_snoU13	.	ENSMUSG00000089540	ProperStrand	99	1	-7.1414
chr3	36354473	36354563	protein_coding	Anxa5	intron	ENSMUSG00000027712	NonProperStrand	1	chr3	36369480	36369570	protein_coding	Anxa5	intron	ENSMUSG00000027712	ProperStrand	19	1	-inf
chr5	74489273	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr7	117416387	117416446	protein_coding	Swap70	intron	ENSMUSG00000031015	ProperStrand	47	3	-14.0525
chr6	66775417	66775497	LINE	L1Md_T	L1	chr6L1Md_T66774278	ProperStrand	1	chr7	54443667	54443757	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-inf
chr5	108334194	108334266	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	chr4	3762228	3762258	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	1	-1.4765
chr3	148489471	148489494	protein_coding	Lphn2	exon	ENSMUSG00000028184	ProperStrand	20	chr7	116663649	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-10.9983
chr7	25984120	25984210	LINE	L1ME3	L1	chr7L1ME325984091	ProperStrand	1	chr7	25983846	25983926	SINE	B3A	B2	chr7B3A25983858	ProperStrand	1	1	-inf
chr2	78709640	78709657	protein_coding	Ube2e3	intron	ENSMUSG00000027011	NonProperStrand	4	chr17	35089181	35089252	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-11.1133
chr11	116802289	116802327	protein_coding	Mgat5b	intron	ENSMUSG00000043857	ProperStrand	21	chr9	15119649	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.5745
chr2	167336387	167336415	protein_coding	Rnf114	exon	ENSMUSG00000006418	ProperStrand	18	chr10	110918549	110918639	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-5.7690
chr9	15119968	15121089	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	chr4	131908686	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	15	-6.8225
chr10	126502040	126502292	protein_coding	Cdk4	exon	ENSMUSG00000006728	ProperStrand	47	chr8	96404169	96404188	protein_coding	Gnao1	intron	ENSMUSG00000031748	NonProperStrand	9	2	-inf
chr17	24857320	24857373	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	1	-5.5693
chr11	70795723	70795813	protein_coding	C1qbp	exon	ENSMUSG00000018446	ProperStrand	46	chr19	8963096	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.7301
chr13	99648608	99648669	protein_coding	Tnpo1	exon	ENSMUSG00000009470	ProperStrand	56	chr12	17552949	17553033	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-5.2233
chr9	121661627	121661717	protein_coding	Nktr	intron	ENSMUSG00000032525	ProperStrand	41	chr3	100747649	100747728	protein_coding	Ttf2	intron	ENSMUSG00000033222	ProperStrand	50	2	-20.7078
chr16	17640971	17641071	protein_coding	Smpd4	exon	ENSMUSG00000005899	ProperStrand	33	chr9	21204426	21204446	protein_coding	Ilf3	exon	ENSMUSG00000032178	ProperStrand	164	2	-19.4614
chr5	23907915	23907931	protein_coding	Abcb8	exon	ENSMUSG00000028973	NonProperStrand	49	chr13	59803286	59803302	protein_coding	Fam75d3	exon	ENSMUSG00000050876	ProperStrand	46	1	-14.2647
chr11	106128924	106128941	protein_coding	Smarcd2	utr5	ENSMUSG00000078619	NonProperStrand	1	chr2	26494763	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-inf
chr11	97847554	97847644	protein_coding	Plxdc1	utr5	ENSMUSG00000017417	ProperStrand	20	chr5	125486846	125486862	protein_coding	Fam101a	intron	ENSMUSG00000037962	ProperStrand	9	1	-18.8113
chr7	25988695	25988785	protein_coding	Dedd2	exon	ENSMUSG00000054499	ProperStrand	5	chr16	23110938	23111002	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr7	120657374	120657390	protein_coding	Far1	utr5	ENSMUSG00000030759	ProperStrand	72	chr11	97643007	97643038	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.1659
chr5	108336411	108336495	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	chr1	145626138	145626192	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-1.0676
chr10	5992818	5992890	protein_coding	Akap12	exon	ENSMUSG00000038587	ProperStrand	1008	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-2.7692
chr10	24613238	24613256	protein_coding	Med23	intron	ENSMUSG00000019984	NonProperStrand	3	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.6896
chr5	108333629	108333662	snoRNA	ENSMUSG00000064453_Snord21	.	ENSMUSG00000064453	ProperStrand	201	chr6	71832638	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-3.3181
chr14	45949538	45949554	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-7.3835
chr7	70363276	70363356	LINE	L1M5	L1	chr7L1M570363110	NonProperStrand	1	chr7	70363657	70363747	LINE	L1M5	L1	chr7L1M570363578	NonProperStrand	1	1	-inf
chr16	50425797	50425847	protein_coding	Bbx	intron	ENSMUSG00000022641	ProperStrand	18	chr7	150717295	150717348	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	2	-12.7012
chr9	122075466	122075482	protein_coding	Snrk	exon	ENSMUSG00000038145	NonProperStrand	97	chr2	37255628	37255660	snoRNA	ENSMUSG00000077756_Snord90	.	ENSMUSG00000077756	ProperStrand	167	1	-10.2943
chr10	13562823	13562840	protein_coding	Aig1	intron	ENSMUSG00000019806	ProperStrand	49	chr11	77995188	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-6.5835
chr13	9833563	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr1	134517534	134517618	protein_coding	Nfasc	exon	ENSMUSG00000026442	ProperStrand	25	2	-10.8236
chr1	132359178	132359250	protein_coding	Cd55	utr5	ENSMUSG00000026399	ProperStrand	7	chr18	35716739	35716829	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-6.2708
chr7	106628489	106630810	protein_coding	Rps3	exon	ENSMUSG00000030744	ProperStrand	159	chr10	110918576	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-3.2618
chr15	75751695	75751711	protein_coding	Pycrl	intron	ENSMUSG00000022571	ProperStrand	1	chr7	148340514	148340572	protein_coding	Ptdss2	exon	ENSMUSG00000025495	ProperStrand	29	1	-inf
chr1	145971868	145971889	LINE	L2	L2	chr1L2145971861	NonProperStrand	49	chr11	55296276	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	2	-10.6416
chr19	8983473	8989502	protein_coding	Ganab	exon	ENSMUSG00000071650	ProperStrand	145	chr8	73419652	73419746	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	4	-6.6085
chr11	55209090	55209352	protein_coding	Sparc	exon	ENSMUSG00000018593	ProperStrand	48	chr16	23111757	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	7	-16.4292
chr7	4594886	4594985	protein_coding	Ppp6r1	exon	ENSMUSG00000052296	ProperStrand	20	chr19	8799581	8799646	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-8.9766
chr13	23830779	23830869	protein_coding	Hist1h1c	exon	ENSMUSG00000036181	ProperStrand	99	chr7	116664794	116664874	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-4.9080
chr9	115998529	115998629	protein_coding	Tgfbr2	utr3	ENSMUSG00000032440	ProperStrand	3	chr7	116663715	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-8.5982
chr11	72257349	72264825	protein_coding	Mybbp1a	exon	ENSMUSG00000040463	ProperStrand	279	chr7	29136528	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	5	-3.3663
chr1	75196551	75196567	protein_coding	Glb1l	exon	ENSMUSG00000026200	ProperStrand	3	chr19	8800355	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-9.7434
chr10	99911578	99911659	protein_coding	Tmtc3	exon	ENSMUSG00000036676	ProperStrand	53	chr11	69483141	69483231	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-4.6700
chr15	84384125	84384141	protein_coding	Ldoc1l	utr3	ENSMUSG00000055745	ProperStrand	4	chr16	23111392	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-10.7545
chr18	35097564	35097662	protein_coding	Hspa9	utr3	ENSMUSG00000024359	ProperStrand	166	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-1.8367
chr12	39721230	39721320	LINE	Lx2	L1	chr12Lx239721253	NonProperStrand	1	chr12	39721112	39721202	LINE	Lx	L1	chr12Lx39720867	ProperStrand	1	1	-inf
chr11	30854047	30854064	protein_coding	Erlec1	exon	ENSMUSG00000020311	ProperStrand	5	chr2	157873718	157875830	protein_coding	Rprd1b	exon	ENSMUSG00000027651	ProperStrand	33	1	-18.3669
chr19	42648949	42648998	protein_coding	D19Ertd386e	intron	ENSMUSG00000025184	ProperStrand	4	chr17	72663208	72663224	protein_coding	Alk	intron	ENSMUSG00000055471	ProperStrand	21	1	-19.5361
chr2	119120130	119120146	protein_coding	Vps18	exon	ENSMUSG00000034216	NonProperStrand	40	chr7	29136537	29136638	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.0737
chr19	47846149	47847527	protein_coding	Wdr96	exon	ENSMUSG00000044948	ProperStrand	9	chr17	13112450	13112528	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	2	-13.5195
chr2	118365189	118365210	protein_coding	Bmf	intron	ENSMUSG00000040093	NonProperStrand	2	chr4	131865854	131865899	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-8.7800
chr3	89842339	89842811	protein_coding	Ubap2l	exon	ENSMUSG00000042520	ProperStrand	88	chr7	118219618	118219698	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-3.4566
chr2	158205274	158205407	snoRNA	ENSMUSG00000064585_SNORA71	.	ENSMUSG00000064585	ProperStrand	418	chr17	35299507	35299642	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	2	-2.6372
chr16	23110827	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	chr15	71624612	71624799	snoRNA	ENSMUSG00000088895_SNORA81	.	ENSMUSG00000088895	ProperStrand	348	33	-12.5152
chr5	138567721	138567774	protein_coding	Zscan21	exon	ENSMUSG00000037017	ProperStrand	11	chr1	89673606	89673696	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-6.5694
chr13	61743009	61743028	LTR	MT2B	ERVL	chr13MT2B61742901	ProperStrand	1	chr16	11144177	11144277	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	1	-inf
chr17	88225603	88225651	LTR	RMER17B	ERVK	chr17RMER17B88225435	ProperStrand	1	chr12	83321882	83321898	protein_coding	Sipa1l1	intron	ENSMUSG00000042700	ProperStrand	84	1	-inf
chr19	53084613	53086305	protein_coding	Xpnpep1	exon	ENSMUSG00000025027	ProperStrand	49	chr2	89368462	89368479	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	7	-inf
chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chrX	40944841	40944857	protein_coding	Gm362	exon	ENSMUSG00000078320	ProperStrand	129	1	-2.2428
chr17	38290745	38290764	LTR	MurERV4-int	ERVK	chr17MurERV4-int38290059	ProperStrand	21	chr4	131866168	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-5.6911
chr8	119334677	119334767	LTR	MT2A	ERVL	chr8MT2A119334585	NonProperStrand	1	chr8	119334841	119334921	SINE	B3	B2	chr8B3119334804	ProperStrand	1	1	-inf
chr17	56732685	56732703	protein_coding	Safb	intron	ENSMUSG00000071054	ProperStrand	79	chr4	122970392	122970484	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-6.8679
chr1	120920092	120920187	protein_coding	Gli2	intron	ENSMUSG00000048402	ProperStrand	148	chr19	8799407	8799433	snoRNA	ENSMUSG00000065280_SNORD28	.	ENSMUSG00000065280	ProperStrand	269	1	-8.4980
chr9	78023111	78023148	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr17	35032534	35032634	protein_coding	Zbtb12	exon	ENSMUSG00000049823	ProperStrand	6	1	-10.6020
chr17	23955819	23955838	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	chr7	117189961	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	4	-6.9502
chr7	54442616	54442716	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	chr11	120209400	120209796	protein_coding	Actg1	utr5	ENSMUSG00000062825	ProperStrand	178	1	-7.5577
chr14	55476645	55476661	protein_coding	Homez	exon	ENSMUSG00000057156	NonProperStrand	127	chr1	88252837	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-5.1703
chr9	14397578	14397594	protein_coding	Amotl1	exon	ENSMUSG00000013076	ProperStrand	72	chrX	16259422	16261115	protein_coding	Maoa	exon	ENSMUSG00000025037	ProperStrand	17	1	-15.5058
chr2	168492691	168492712	protein_coding-noncoding	Atp9a	utr3	ENSMUSG00000027546	ProperStrand	2	chr1	87982608	87982655	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	1	-15.9827
chr10	88684309	88684329	protein_coding	Ano4	intron	ENSMUSG00000035189	NonProperStrand	13	chr13	51743580	51743661	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-9.9577
chr4	46554809	46554826	protein_coding	Coro2a	exon	ENSMUSG00000028337	NonProperStrand	24	chr8	72862214	72862432	protein_coding	Upf1	exon	ENSMUSG00000058301	ProperStrand	90	1	-14.3591
chr5	21245897	21245932	protein_coding	Pmpcb	exon	ENSMUSG00000029017	ProperStrand	16	chr1	162965986	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-10.0921
chr17	35972802	35972925	protein_coding	Tubb5	exon	ENSMUSG00000001525	ProperStrand	624	chr1	158572373	158572395	protein_coding	Abl2	exon	ENSMUSG00000026596	ProperStrand	37	7	-inf
chr14	51427290	51427323	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr7	117189864	117189932	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	2	-1.8094
chr9	111064034	111064050	protein_coding	Lrrfip2	intron	ENSMUSG00000032497	ProperStrand	28	chr5	116048734	116048783	protein_coding	Gcn1l1	exon	ENSMUSG00000041638	ProperStrand	408	1	-11.0132
chr1	162966189	162966267	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	chr1	88252837	88252879	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	4	-5.9421
chr10	77639875	77640504	protein_coding	Pwp2	exon	ENSMUSG00000032834	NonProperStrand	8	chr3	88715213	88715230	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-11.3577
chr7	126862750	126862805	protein_coding	Thumpd1	exon	ENSMUSG00000030942	ProperStrand	14	chr17	24857816	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.9973
chr2	170200171	170200188	antisense	1700040N02Rik	.	ENSMUSG00000086999	ProperStrand	25	chr16	23110527	23110559	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.0525
chr17	4082175	4082217	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr13	107737212	107737228	protein_coding	Dimt1	utr5	ENSMUSG00000021692	ProperStrand	185	1	-7.7153
chr3	96527940	96527956	protein_coding	Polr3c	exon	ENSMUSG00000028099	NonProperStrand	75	chr11	6428040	6428086	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.7944
chr2	26493440	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr2	145077954	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-1.2262
chr2	90235286	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr16	32066101	32066129	snoRNA	ENSMUSG00000077460_SNORA17	.	ENSMUSG00000077460	ProperStrand	1	1	-inf
chr8	124406951	124406972	protein_coding	Slc7a5	exon	ENSMUSG00000040010	ProperStrand	166	chr1	162968447	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-4.1143
chr4	128444905	128444922	protein_coding	A3galt2	utr3	ENSMUSG00000028794	ProperStrand	3	chr5	115940292	115940406	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	1	-15.1179
chr7	29137223	29137402	protein_coding	Rps16	exon	ENSMUSG00000037563	ProperStrand	191	chr9	15119318	15119398	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-2.9454
chr7	31388320	31388336	protein_coding	Upk1a	utr3	ENSMUSG00000006313	NonProperStrand	2	chr4	131865853	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-8.7800
chr15	89201869	89201969	protein_coding	Ncaph2	utr3	ENSMUSG00000008690	ProperStrand	65	chr10	127800479	127800495	protein_coding	Coq10a	utr3	ENSMUSG00000039914	NonProperStrand	15	1	-15.9769
chr8	87200677	87200774	protein_coding	Nacc1	exon	ENSMUSG00000001910	ProperStrand	130	chr2	84530665	84530722	protein_coding	Zdhhc5	exon	ENSMUSG00000034075	ProperStrand	20	8	-18.7455
chr9	40612873	40612921	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	chr4	131908236	131908416	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	8	-1.7745
chr8	73879178	73879623	protein_coding	Myo9b	exon	ENSMUSG00000004677	ProperStrand	78	chr3	123210878	123210968	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.6540
chrX	34667269	34667285	protein_coding	Nkap	exon	ENSMUSG00000016409	NonProperStrand	133	chr11	77994819	77994864	snoRNA	ENSMUSG00000064540_Snord42a	.	ENSMUSG00000064540	ProperStrand	142	1	-9.9866
chr15	102260451	102260481	protein_coding	Sp1	exon	ENSMUSG00000001280	ProperStrand	124	chr16	16118909	16118958	protein_coding	2310008H04Rik	exon	ENSMUSG00000041974	ProperStrand	30	2	-inf
chr4	86502709	86502756	protein_coding	Rps6	exon	ENSMUSG00000028495	ProperStrand	263	chr18	35714160	35714260	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-1.0630
chr9	96080202	96080286	protein_coding	Gk5	utr3	ENSMUSG00000041440	ProperStrand	7	chr11	6519835	6519925	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-12.3617
chr2	160585735	160585786	protein_coding	Plcg1	exon	ENSMUSG00000016933	ProperStrand	65	chr17	35088957	35089000	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-5.7106
chr7	52381972	52382010	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	chr4	56910554	56910618	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	3	-2.1010
chr10	13004169	13004214	protein_coding	Phactr2	intron	ENSMUSG00000062866	ProperStrand	8	chr1	63225679	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	3	-19.9142
chr10	127152705	127152721	protein_coding	Myo1a	exon	ENSMUSG00000025401	ProperStrand	93	chr12	85350481	85350499	protein_coding	Acot1	utr5	ENSMUSG00000072949	ProperStrand	72	1	-12.0664
chr14	47403794	47403842	protein_coding	Cnih	exon	ENSMUSG00000015759	ProperStrand	10	chr17	24857799	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	3	-13.5687
chr2	90235286	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chrY	603048	603557	protein_coding	Ddx3y	exon	ENSMUSG00000069045	ProperStrand	2	1	-11.8388
chr9	85738014	85738068	protein_coding	Tpbg	exon	ENSMUSG00000035274	ProperStrand	8	chr11	77996588	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-10.1985
chrX	132673816	132673833	protein_coding	Bex4	intron	ENSMUSG00000047844	NonProperStrand	70	chr1	162965994	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-3.3203
chr9	44658066	44658121	protein_coding	Mll1	exon	ENSMUSG00000002028	ProperStrand	151	chr18	33954849	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-1.9113
chrX	99381818	99383183	protein_coding	Rps4x	exon	ENSMUSG00000031320	ProperStrand	139	chr1	162968212	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	2	-8.4889
chr1	90123798	90124639	protein_coding	Heatr7b1	utr5	ENSMUSG00000079429	ProperStrand	147	chr11	62418014	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-3.8421
chr4	116826700	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	chr11	48616637	48616709	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	1	-3.0048
chrX	156315499	156315519	protein_coding	Sh3kbp1	intron	ENSMUSG00000040990	ProperStrand	67	chr8	129468746	129468867	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-4.2039
chr6	117873880	117873920	protein_coding	Hnrnpf	exon	ENSMUSG00000042079	ProperStrand	147	chr11	6428108	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-4.7952
chr18	75160720	75160777	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	chr5	130295449	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-1.5817
chr1	74398548	74398638	protein_coding	Pnkd	utr3	ENSMUSG00000026179	ProperStrand	22	chr16	23111374	23111454	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.8747
chr3	87973400	87973420	protein_coding	Mef2d	utr3	ENSMUSG00000001419	ProperStrand	15	chr2	26203131	26203147	protein_coding	Gpsm1	utr3	ENSMUSG00000026930	ProperStrand	93	1	-15.2562
chr1	162966818	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	chr17	24856708	24856753	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	2	-1.1169
chr12	74652513	74652613	LTR	RLTRETN_Mm	ERVK	chr12RLTRETN_Mm74652322	ProperStrand	9	mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	5	-inf
chr17	32453268	32453285	protein_coding	Akap8	exon	ENSMUSG00000024045	ProperStrand	339	chr17	24857620	24857933	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	2	-10.0612
chr6	47434862	47434952	protein_coding	Cul1	utr5	ENSMUSG00000029686	ProperStrand	8	chr11	69481381	69481461	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-7.1653
chr12	112215257	112215273	protein_coding	Ankrd9	exon	ENSMUSG00000037904	NonProperStrand	35	chr14	52829513	52829570	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-9.2858
chr2	138188029	138188045	protein_coding	Btbd3	intron	ENSMUSG00000062098	NonProperStrand	121	chr11	77995229	77995255	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-4.8158
chr8	125627155	125627174	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	chr4	122968597	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-3.6903
chr7	51505822	51505902	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	chr9	44143208	44143298	protein_coding	H2afx	utr3	ENSMUSG00000049932	ProperStrand	137	1	-6.9708
chr3	107272845	107272861	protein_coding	Slc6a17	utr3	ENSMUSG00000027894	ProperStrand	16	chr7	52382014	52382037	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-9.3785
chr11	119136228	119136244	protein_coding	Gaa	exon	ENSMUSG00000025579	NonProperStrand	201	chr16	23110454	23110507	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-0.7242
chr7	135148242	135148260	protein_coding	Trim72	exon	ENSMUSG00000042828	ProperStrand	24	chr2	158185622	158185655	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-8.3217
chr1	95936068	95936084	protein_coding	Pdcd1	exon	ENSMUSG00000026285	ProperStrand	12	chr4	131865855	131865932	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.6729
chr2	25128585	25128660	protein_coding	Anapc2	exon	ENSMUSG00000026965	ProperStrand	15	chr8	73419657	73419695	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-5.7918
chr5	135069154	135070106	protein_coding	Rfc2	exon	ENSMUSG00000023104	ProperStrand	8	chr5	130300424	130300504	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-6.3882
chr9	108467058	108467222	protein_coding	Impdh2	exon	ENSMUSG00000062867	ProperStrand	74	chr4	131865884	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.4533
chr11	102632615	102632631	protein_coding	Adam11	exon	ENSMUSG00000020926	NonProperStrand	1	chr16	90224646	90225452	protein_coding	Sod1	exon	ENSMUSG00000022982	ProperStrand	75	1	-inf
chr4	148745297	148745328	protein_coding	Ube4b	exon	ENSMUSG00000028960	NonProperStrand	5	chr2	26493365	26493488	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	NonProperStrand	10	2	-19.2096
chr7	52309977	52309993	protein_coding	Prrg2	exon	ENSMUSG00000007837	NonProperStrand	281	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-1.0827
chr19	5800093	5800114	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr5	108334195	108334262	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	2	-0.8428
chr10	63909818	63909837	protein_coding	Ctnna3	intron	ENSMUSG00000060843	NonProperStrand	22	chr2	49307213	49307291	protein_coding	Epc2	utr5	ENSMUSG00000069495	ProperStrand	15	1	-18.3003
chr2	170200171	170200188	antisense	1700040N02Rik	.	ENSMUSG00000086999	ProperStrand	25	chr4	116827128	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-8.7986
chr11	100581379	100581396	protein_coding	Rab5c	utr5	ENSMUSG00000019173	ProperStrand	76	chrX	34622991	34623037	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-2.7507
chr10	127521414	127521514	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr17	35087895	35087946	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-1.1775
chr4	108737116	108737170	protein_coding-noncoding	Osbpl9	utr3	ENSMUSG00000028559	ProperStrand	1	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-inf
chr1	55135905	55135977	protein_coding	Hspd1	exon	ENSMUSG00000025980	ProperStrand	140	chr5	130300507	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.1977
chr2	25563070	25563086	antisense	A230005M16Rik	.	ENSMUSG00000087612	ProperStrand	103	chr7	20282920	20282941	protein_coding	Apoe	exon	ENSMUSG00000002985	ProperStrand	231	1	-9.5258
chr1	192907878	192907895	protein_coding	Nsl1	utr3	ENSMUSG00000062510	ProperStrand	4	chr3	123210927	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-7.3786
chr11	17094272	17094764	protein_coding	Ppp3r1	exon	ENSMUSG00000033953	ProperStrand	10	chrX	135771752	135771769	protein_coding	Mum1l1	utr3	ENSMUSG00000042515	ProperStrand	21	2	-22.5390
chr6	122679616	122679709	protein_coding	Slc2a3	utr3	ENSMUSG00000003153	ProperStrand	682	chr11	48615529	48615574	snoRNA	ENSMUSG00000064725_Snord96a	.	ENSMUSG00000064725	ProperStrand	89	1	-7.6637
chr4	99323605	99323621	protein_coding	Foxd3	exon	ENSMUSG00000067261	ProperStrand	2	chr15	79908957	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-12.8905
chr1	183057131	183059642	protein_coding	Nvl	exon	ENSMUSG00000026516	ProperStrand	89	chr17	39985356	39985458	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-5.1621
chr16	90136227	90136260	protein_coding	Tiam1	intron	ENSMUSG00000002489	ProperStrand	80	chr15	76427475	76427670	protein_coding	Cpsf1	exon	ENSMUSG00000034022	ProperStrand	127	1	-11.2298
chr2	144416107	144416127	protein_coding	Sec23b	utr3	ENSMUSG00000027429	NonProperStrand	2	chr4	43505764	43505864	protein_coding	Ccdc107	intron	ENSMUSG00000028461	ProperStrand	69	1	-inf
chr9	40610038	40610071	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr15	5068430	5068478	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-1.4268
chr1	42755254	42755270	protein_coding	Pou3f3	exon	ENSMUSG00000045515	NonProperStrand	117	chr11	6428089	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.0434
chr2	88261671	88261751	LINE	Lx7	L1	chr2Lx788261427	NonProperStrand	1	chr2	88719038	88719128	SINE	B1_Mur1	Alu	chr2B1_Mur188719002	ProperStrand	1	1	-inf
chr8	100127471	100127489	LTR	RLTR13D5	ERVK	chr8RLTR13D5100127415	NonProperStrand	2	chr18	57514476	57514499	protein_coding	Prrc1	utr5	ENSMUSG00000024594	NonProperStrand	22	2	-inf
chr14	64081493	64081512	protein_coding	Fam167a	utr3	ENSMUSG00000035095	ProperStrand	80	chr5	121655052	121655142	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	3	-8.1158
chr16	36071984	36072000	protein_coding	Ccdc58	utr5	ENSMUSG00000075229	NonProperStrand	55	chr18	35714228	35714292	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-3.6033
chr4	148552019	148552036	protein_coding	Kif1b	utr3	ENSMUSG00000063077	NonProperStrand	19	chr4	151390559	151390619	protein_coding	Klhl21	utr3	ENSMUSG00000073700	ProperStrand	16	2	-23.1503
chr4	43505657	43505931	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr10	80640530	80644299	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	15	-1.5159
chr5	120286385	120286402	protein_coding	Tbx5	intron	ENSMUSG00000018263	NonProperStrand	5	chr11	6428108	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-8.1751
chrX	148356947	148357240	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	chr4	85016349	85016365	protein_coding	Sh3gl2	intron	ENSMUSG00000028488	NonProperStrand	313	1	-5.7906
chr17	51059907	51059923	protein_coding	Tbc1d5	exon	ENSMUSG00000023923	NonProperStrand	51	chr15	91252735	91252751	protein_coding	Slc2a13	intron	ENSMUSG00000036298	ProperStrand	22	1	-15.6807
chr19	8799040	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	chr1	59761672	59761716	snoRNA	ENSMUSG00000089093_Snord11	.	ENSMUSG00000089093	ProperStrand	193	2	-6.0973
chr1	141375472	141375491	protein_coding	Aspm	exon	ENSMUSG00000033952	ProperStrand	64	chr1	43590523	43590539	protein_coding	Nck2	exon	ENSMUSG00000066877	ProperStrand	21	1	-15.3043
chr11	116336485	116336575	protein_coding	Prpsap1	intron	ENSMUSG00000015869	ProperStrand	7	chr10	127962758	127962838	protein_coding	Esyt1	exon	ENSMUSG00000025366	ProperStrand	31	1	-18.3578
chr11	101183162	101183252	protein_coding	Psme3	utr3	ENSMUSG00000078652	ProperStrand	17	chr3	123210904	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-4.3464
chr4	148870492	148870509	protein_coding	Lzic	utr3	ENSMUSG00000028990	ProperStrand	9	chr16	23110912	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.9939
chr9	15130700	15130793	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	chr10	59657484	59657525	protein_coding	Chst3	intron	ENSMUSG00000057337	ProperStrand	10	5	-19.3898
chr2	128951494	128951584	protein_coding	Polr1b	exon	ENSMUSG00000027395	ProperStrand	27	chr7	29136541	29136641	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	6	-19.5267
mmu-miR-1949	4	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr14	25312698	25312742	protein_coding	Rps24	utr3	ENSMUSG00000025290	ProperStrand	110	1	-6.9425
chr5	87257243	87257328	protein_coding-noncoding	Ythdc1	utr5	ENSMUSG00000035851	ProperStrand	1	chr12	112779226	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-inf
chr15	77597977	77597993	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr8	13159389	13159405	protein_coding	Lamp1	exon	ENSMUSG00000031447	ProperStrand	92	1	-7.9534
chr19	11454191	11454271	LINE	L1Md_F2	L1	chr19L1Md_F211453864	NonProperStrand	1	chr19	11454322	11454412	LTR	MTC	MaLR	chr19MTC11454278	NonProperStrand	1	1	-inf
chr3	34550123	34550141	protein_coding	Sox2	exon	ENSMUSG00000074637	NonProperStrand	6	chr11	6428034	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-7.7732
chrX	147476948	147476965	SINE	RSINE1	B4	chrXRSINE1147476844	NonProperStrand	20	chr17	5347022	5347040	protein_coding	Arid1b	utr3	ENSMUSG00000069729	NonProperStrand	22	1	-17.5303
chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr19	8799357	8799404	snoRNA	ENSMUSG00000065280_SNORD28	.	ENSMUSG00000065280	ProperStrand	269	1	-1.1394
chr13	23852709	23852773	protein_coding	Hist1h4a	utr3	ENSMUSG00000060093	ProperStrand	12	chr2	158205382	158205405	snoRNA	ENSMUSG00000064585_SNORA71	.	ENSMUSG00000064585	ProperStrand	418	1	-12.7093
chr9	26949311	26949330	protein_coding	Jam3	intron	ENSMUSG00000031990	NonProperStrand	8	chr6	57704066	57704139	protein_coding	Vopp1	utr3	ENSMUSG00000037788	ProperStrand	6	2	-18.6119
chr7	129085576	129085593	protein_coding	Cog7	intron	ENSMUSG00000034951	ProperStrand	29	chr1	89673728	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-4.6315
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr4	122970392	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	5	-10.5576
chr11	84237846	84237943	protein_coding	Aatf	intron	ENSMUSG00000018697	ProperStrand	10	chr4	129687505	129687521	protein_coding	Bai2	exon	ENSMUSG00000028782	ProperStrand	119	1	-15.6056
chr8	14173063	14173079	protein_coding	Dlgap2	intron	ENSMUSG00000047495	ProperStrand	20	chr7	117189986	117190054	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-5.4343
chr4	148450164	148473903	protein_coding	Pex14	exon	ENSMUSG00000028975	ProperStrand	16	chr11	98878371	98878468	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-8.9452
chr14	51427243	51427389	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr10	5992145	6063975	protein_coding	Akap12	intron	ENSMUSG00000038587	ProperStrand	1008	5	-9.6541
chr8	109192521	109192562	protein_coding	Cdh1	utr3	ENSMUSG00000000303	ProperStrand	283	chr5	115717665	115717681	protein_coding	Rnf10	intron	ENSMUSG00000041740	NonProperStrand	21	1	-12.3310
chr5	64203925	64203942	protein_coding	0610040J01Rik	intron	ENSMUSG00000060512	ProperStrand	36	chr5	108334195	108334241	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-5.8176
chr11	82618282	82618336	protein_coding	Rffl	utr3	ENSMUSG00000020696	ProperStrand	3	chr11	75309201	75309239	protein_coding	Prpf8	utr3	ENSMUSG00000020850	ProperStrand	255	1	-16.8222
chr5	108333772	108333818	protein_coding	Rpl5	exon	ENSMUSG00000058558	ProperStrand	235	chr8	73419660	73419760	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-0.9870
chr3	41385143	41403982	protein_coding	Phf17	exon	ENSMUSG00000025764	ProperStrand	101	chr17	24665419	24665499	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	2	-6.6381
chr1	133141328	133141344	protein_coding	Rassf5	exon	ENSMUSG00000026430	ProperStrand	73	chr9	65044377	65044477	snRNA	ENSMUSG00000075763_U5	.	ENSMUSG00000075763	ProperStrand	216	1	-10.3502
chr2	128620182	128620198	protein_coding	Mertk	exon	ENSMUSG00000014361	ProperStrand	10	chr11	6428122	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-6.6888
chr6	34262799	34267417	protein_coding	Akr1b3	utr5	ENSMUSG00000001642	ProperStrand	71	chr13	76341035	76341055	protein_coding	Fam81b	intron	ENSMUSG00000078966	NonProperStrand	220	1	-10.3693
chr6	29325656	29325724	protein_coding	Calu	utr3	ENSMUSG00000029767	ProperStrand	47	chr7	148268925	148269015	protein_coding	Pkp3	exon	ENSMUSG00000054065	ProperStrand	4	1	-20.1743
chrX	96245892	96245908	protein_coding	Stard8	intron	ENSMUSG00000031216	ProperStrand	142	chr11	55296259	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-4.5071
chr11	97578376	97578448	protein_coding	Pip4k2b	utr3	ENSMUSG00000018547	ProperStrand	46	chr17	24857821	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.7531
chr3	153588815	153588868	protein_coding	Acadm	exon	ENSMUSG00000062908	ProperStrand	14	chr2	91436302	91436335	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	3	-inf
chr5	9161620	9161710	protein_coding	Dmtf1	utr5	ENSMUSG00000042508	ProperStrand	6	chr11	6428099	6428156	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-7.7732
chr7	52382016	52382081	protein_coding-noncoding	Rpl13a	utr3	ENSMUSG00000074129	ProperStrand	106	chr10	23505152	23505204	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-2.0966
chr9	63868722	63868739	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	chr2	166890503	166890559	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	3	-7.6697
chr5	100855922	100855974	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr3	82816758	82816775	protein_coding	Fgg	exon	ENSMUSG00000033860	NonProperStrand	321	1	-3.4200
chr7	3297217	3297236	protein_coding	Myadm	exon	ENSMUSG00000068566	ProperStrand	31	chr7	29136525	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	5	-15.2234
chr10	125403376	125403393	protein_coding	Lrig3	utr5	ENSMUSG00000020105	ProperStrand	40	chr11	55296277	55296332	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-6.9848
chr1	155287314	155287354	snoRNA	ENSMUSG00000064435_SNORA4	.	ENSMUSG00000064435	ProperStrand	263	chr14	76247725	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	5	-8.4825
chr13	9833551	9833675	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr5	108334194	108336493	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	11	-1.6161
chr2	164257636	164257652	protein_coding	Sdc4	intron	ENSMUSG00000017009	ProperStrand	177	chr19	4914905	4915035	protein_coding	Dpp3	exon	ENSMUSG00000063904	ProperStrand	36	1	-12.1746
chr9	43919919	43920340	protein_coding	Rnf26	exon	ENSMUSG00000053128	ProperStrand	30	chr16	23110841	23111010	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-4.9550
chrX	99033560	99033650	DNA	Cheshire	MER1_type	chrXCheshire99033435	NonProperStrand	1	chrX	99034104	99034184	LINE	L1MA9	L1	chrXL1MA999033849	NonProperStrand	1	1	-inf
chrX	160396313	160396329	protein_coding	Zrsr2	utr5	ENSMUSG00000031370	ProperStrand	57	chr15	5068426	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-6.1681
chr6	40123350	40123367	protein_coding	Gm5567	intron	ENSMUSG00000057716	ProperStrand	25	chr16	23111447	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.6475
chr13	58229512	58229547	protein_coding	Hnrnpa0	exon	ENSMUSG00000007836	ProperStrand	110	chr4	134926583	134926599	protein_coding	A330049M08Rik	exon	ENSMUSG00000043924	NonProperStrand	2	1	-inf
chr11	68067261	68067277	protein_coding	Ntn1	intron	ENSMUSG00000020902	NonProperStrand	194	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-8.4142
chr4	131866203	131866303	lincRNA	Snhg12	exon	ENSMUSG00000086290	ProperStrand	178	chr19	12086454	12086495	tRNA	tRNA109-ValTAC	.	1609141	ProperStrand	96	1	-10.1875
chr2	31529066	31529109	protein_coding	Exosc2	intron	ENSMUSG00000039356	ProperStrand	39	chr12	112779190	112779280	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	4	-17.0018
chr2	112250316	112250336	protein_coding	2410042D21Rik	exon	ENSMUSG00000027132	ProperStrand	10	chr7	148634715	148634839	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-12.2290
chr9	40612282	40612382	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr12	106269284	106269335	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	13	-14.5652
chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	chr13	37997472	37997547	protein_coding	Rreb1	intron	ENSMUSG00000039087	ProperStrand	33	1	-10.2699
chr2	94261661	94262507	protein_coding	Api5	exon	ENSMUSG00000027193	ProperStrand	51	chr3	153991597	153991614	protein_coding	Lhx8	utr5	ENSMUSG00000093486	NonProperStrand	47	1	-14.1433
chr7	34927766	34927856	protein_coding	Uba2	exon	ENSMUSG00000052997	ProperStrand	165	chr12	106269476	106269556	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-2.3230
chr14	119377564	119377636	protein_coding	Dnajc3	utr3	ENSMUSG00000022136	ProperStrand	10	chrX	34622906	34622942	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-6.6656
chr10	126769683	126770675	protein_coding	Gli1	exon	ENSMUSG00000025407	ProperStrand	48	chr11	4820972	4820990	protein_coding	Thoc5	intron	ENSMUSG00000034274	ProperStrand	325	1	-10.3771
chrX	84483702	84483757	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr1	181733870	181733886	protein_coding	Gm10518	exon	ENSMUSG00000073486	NonProperStrand	5	1	-13.4102
chr2	127038103	127040552	protein_coding	Snrnp200	exon	ENSMUSG00000003660	ProperStrand	203	chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	1	-7.0589
chr10	80869440	80869458	protein_coding	Nfic	intron	ENSMUSG00000055053	ProperStrand	69	chr11	68886945	68887037	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-3.8810
chr17	39985573	39985673	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr9	64143811	64143876	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-1.0818
chr1	137779170	137780488	protein_coding	Pkp1	exon	ENSMUSG00000026413	ProperStrand	12	chr4	131908753	131908810	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.9639
chr17	25283313	25283329	protein_coding	Clcn7	exon	ENSMUSG00000036636	NonProperStrand	34	chr3	123210922	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.0438
chr7	152047547	152047637	protein_coding	Fgf4	exon	ENSMUSG00000050917	ProperStrand	66	chr19	8989422	8989502	protein_coding	Ganab	exon	ENSMUSG00000071650	ProperStrand	145	2	-17.5856
chr6	86475500	86475590	protein_coding	Pcbp1	exon	ENSMUSG00000051695	ProperStrand	108	chr9	15119284	15119364	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-3.9862
chr9	40612857	40612921	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	chr17	35088971	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	5	-11.0820
chr9	94437767	94437784	protein_coding	1190002N15Rik	exon	ENSMUSG00000045414	NonProperStrand	11	chr9	67109770	67109816	protein_coding	Tln2	exon	ENSMUSG00000052698	ProperStrand	79	1	-16.2237
chr8	10634400	10634419	protein_coding	Myo16	utr3	ENSMUSG00000039057	NonProperStrand	45	chr5	115940292	115940406	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	1	-9.3139
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr10	61325507	61325524	protein_coding	Col13a1	exon	ENSMUSG00000058806	ProperStrand	120	1	-6.3648
chr7	30030960	30031009	protein_coding	Yif1b	exon	ENSMUSG00000030588	ProperStrand	154	chr5	130300521	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-2.0996
chr2	164597521	164597681	protein_coding	Ube2c	exon	ENSMUSG00000001403	ProperStrand	40	chr18	73693162	73693185	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-6.3230
chr17	29071818	29071836	antisense	Gm16191	.	ENSMUSG00000087693	ProperStrand	25	chr5	136254615	136259179	protein_coding	Mdh2	exon	ENSMUSG00000019179	ProperStrand	50	1	-15.4401
chr7	17416447	17416884	protein_coding	Strn4	exon	ENSMUSG00000030374	ProperStrand	12	chr18	35714204	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-6.5851
chr7	19722633	19722649	protein_coding	Fbxo46	utr3	ENSMUSG00000050428	NonProperStrand	24	chr18	74938045	74938108	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	ProperStrand	1022	1	-9.4941
chr9	15130703	15130793	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	chr11	68886940	68887020	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-0.8309
chr1	93215676	93216733	protein_coding	Scly	exon	ENSMUSG00000026307	ProperStrand	3	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-8.4253
chr2	119696094	119696184	SINE	B1_Mur3	Alu	chr2B1_Mur3119696082	ProperStrand	1	chr17	36401807	36401897	protein_coding	Trim39	intron	ENSMUSG00000045409	NonProperStrand	8	1	-inf
chr9	21387499	21387543	protein_coding	Carm1	exon	ENSMUSG00000032185	ProperStrand	82	chr4	131908355	131908415	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.9981
chr14	61113419	61113436	LINE	L1MB3	L1	chr14L1MB361113375	NonProperStrand	72	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.4931
chr4	79659300	79659390	LINE	L1_Mur1	L1	chr4L1_Mur179658238	ProperStrand	1	chr11	11217252	11217332	protein_coding	Zpbp	intron	ENSMUSG00000020193	NonProperStrand	5	1	-inf
chr18	36720476	36720535	protein_coding	Ankhd1	utr5	ENSMUSG00000024483	ProperStrand	56	chr9	64024485	64024567	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	1	-8.5037
chr4	43505743	43505823	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr5	137972029	137974417	protein_coding	Gnb2	utr5	ENSMUSG00000029713	ProperStrand	23	1	-4.8772
chr2	90235314	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	27291761	27291777	protein_coding	Vldlr	utr5	ENSMUSG00000024924	NonProperStrand	36	1	-5.4531
chr17	46633631	46633721	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr17	46633888	46633978	protein_coding	BC048355	intron	ENSMUSG00000040658	ProperStrand	8	1	-13.3671
chr1	188528544	188528560	protein_coding	Tgfb2	exon	ENSMUSG00000039239	ProperStrand	6	chr9	15118245	15118283	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-8.0740
chr7	88488161	88488261	protein_coding	Rps17	intron	ENSMUSG00000061787	ProperStrand	105	chr1	162966189	162966269	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	8	-inf
chr19	30113780	30130750	protein_coding	Uhrf2	exon	ENSMUSG00000024817	ProperStrand	40	chr16	23110891	23110923	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	9	-12.5037
chr11	76022923	76022944	protein_coding	Glod4	intron	ENSMUSG00000017286	ProperStrand	23	chr1	88423358	88423408	protein_coding	Ptma	utr5	ENSMUSG00000026238	ProperStrand	385	1	-11.5306
chr10	80642356	80643323	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr4	131866631	131866676	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	2	-3.9243
mmu-miR-2137	0	18	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	chr11	98864249	98864293	protein_coding	Top2a	exon	ENSMUSG00000020914	ProperStrand	324	1	-8.1826
chr7	5062341	5062361	protein_coding	Rfpl4	exon	ENSMUSG00000035191	NonProperStrand	27	chr5	130300497	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-6.6939
chr4	43001567	43003628	protein_coding	Vcp	exon	ENSMUSG00000028452	ProperStrand	108	chr8	73419657	73419747	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-3.7997
chr12	52472722	52473417	protein_coding	G2e3	exon	ENSMUSG00000035293	ProperStrand	53	chr4	131865853	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.9636
chr16	98168829	98168846	protein_coding	Zfp295	utr3	ENSMUSG00000046962	ProperStrand	63	chr14	33005091	33005139	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-3.9020
chrX	160396312	160396329	protein_coding	Zrsr2	utr5	ENSMUSG00000031370	ProperStrand	57	chr4	79648684	79648712	pseudogene	Gm11407	.	ENSMUSG00000082179	ProperStrand	26	1	-15.1060
chr4	40128484	40128531	protein_coding	Aco1	exon	ENSMUSG00000028405	ProperStrand	25	chr11	97642978	97643074	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	5	-17.0178
chr16	20345638	20345657	protein_coding	Abcc5	intron	ENSMUSG00000022822	NonProperStrand	7	chr19	8963086	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-6.3961
chr7	112782969	112782985	protein_coding	Arfip2	utr3	ENSMUSG00000030881	ProperStrand	191	chr11	6428089	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.3047
chr5	145497634	145497651	protein_coding	Tmem130	utr3	ENSMUSG00000043388	ProperStrand	26	chr4	131908300	131908390	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.7765
chr11	51936032	51936060	protein_coding	Ppp2ca	utr3	ENSMUSG00000020349	ProperStrand	22	chr1	88247743	88247799	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-7.0846
chr7	89341847	89341863	protein_coding	Sh3gl3	intron	ENSMUSG00000030638	NonProperStrand	11	chr19	8963027	8963166	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.4574
chr5	134859785	134861675	protein_coding	Gtf2ird1	exon	ENSMUSG00000023079	ProperStrand	85	chr11	6520365	6520445	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	1	-7.0242
chr14	78969405	78969512	protein_coding	Dgkh	utr3	ENSMUSG00000034731	ProperStrand	29	chr7	16524110	16524132	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	2	-17.7868
chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	chr5	108334195	108334264	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-0.8310
chr11	88860724	88860793	protein_coding	Trim25	utr5	ENSMUSG00000000275	ProperStrand	50	chr14	27354375	27354393	protein_coding	Slmap	utr5	ENSMUSG00000021870	ProperStrand	9	1	-17.5746
chr11	69559122	69559190	protein_coding	Polr2a	exon	ENSMUSG00000005198	ProperStrand	200	chr13	53271233	53271251	protein_coding	Ror2	intron	ENSMUSG00000021464	ProperStrand	46	1	-11.4342
chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	chr6	148303504	148303613	protein_coding	Rps4y2	exon	ENSMUSG00000063171	ProperStrand	47	1	-7.4697
chrX	148773270	148776368	protein_coding	Tspyl2	exon	ENSMUSG00000041096	ProperStrand	23	chr16	23110913	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.7108
chr16	90257572	90257604	protein_coding	Scaf4	exon	ENSMUSG00000022983	ProperStrand	44	chr7	150717354	150717425	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	3	-14.0833
chr2	129998643	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr3	93359194	93359211	protein_coding	S100a10	intron	ENSMUSG00000041959	ProperStrand	4	1	-13.7857
chr17	35089179	35089211	processed_transcript	1110038B12Rik	.	ENSMUSG00000092203	ProperStrand	126	chr11	115255676	115255783	protein_coding	Cdr2l	utr3	ENSMUSG00000050910	ProperStrand	9	1	-15.6969
chr10	126532870	126532925	protein_coding	Os9	utr3	ENSMUSG00000040462	ProperStrand	72	chr6	115758041	115758130	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-5.1171
chr11	68936358	68936374	protein_coding	Hes7	exon	ENSMUSG00000023781	NonProperStrand	66	chr2	124906403	124906419	protein_coding	Slc24a5	exon	ENSMUSG00000035183	NonProperStrand	3	1	-20.1561
chr3	87511212	87511302	protein_coding	Arhgef11	intron	ENSMUSG00000041977	ProperStrand	16	chr11	69481377	69481457	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.7383
chr1	172079405	172079495	protein_coding	Uap1	exon	ENSMUSG00000026670	ProperStrand	18	chr6	45494576	45494594	protein_coding	Cntnap2	intron	ENSMUSG00000039419	NonProperStrand	283	1	-12.6466
chr9	108398520	108398645	protein_coding	Usp19	exon	ENSMUSG00000006676	ProperStrand	57	chr10	107251028	107251044	protein_coding	Otogl	exon	ENSMUSG00000091455	NonProperStrand	8	1	-17.3425
chr1	132742958	132742975	protein_coding	Pigr	exon	ENSMUSG00000026417	NonProperStrand	48	chr4	131908356	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-3.2324
chr7	6662074	6662122	protein_coding	Peg3	exon	ENSMUSG00000002265	ProperStrand	8	chr10	23505152	23505252	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-8.1135
chr16	22383387	22383478	protein_coding	Etv5	utr3	ENSMUSG00000013089	ProperStrand	88	chr11	69483168	69483248	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.8233
chr14	25673634	25673651	DNA	MER63D	AcHobo	chr14MER63D25673510	NonProperStrand	65	chr16	4045536	4045898	protein_coding	Trap1	exon	ENSMUSG00000005981	ProperStrand	25	1	-14.9194
chr17	87834525	87834947	protein_coding	Calm2	exon	ENSMUSG00000036438	ProperStrand	59	chr7	116663715	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.5406
chr9	65127126	65127142	protein_coding	Cilp	exon	ENSMUSG00000042254	ProperStrand	212	chr1	162965531	162965592	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.2257
chrX	84483699	84483732	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr5	121655016	121655127	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	6	-3.4491
chr17	8720218	8720234	protein_coding	Pde10a	intron	ENSMUSG00000023868	ProperStrand	25	chr2	130101986	130102050	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-7.0924
chrX	103211127	103211170	protein_coding	Cox7b	utr5	ENSMUSG00000031231	ProperStrand	16	chr5	108336383	108336449	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	4	-inf
chr19	45098640	45099213	protein_coding	Lzts2	exon	ENSMUSG00000035342	ProperStrand	14	chr2	76076433	76076450	protein_coding	Pde11a	intron	ENSMUSG00000075270	NonProperStrand	8	1	-19.6086
chr5	117735734	117735759	protein_coding	Pebp1	exon	ENSMUSG00000032959	ProperStrand	54	chr9	74025766	74025783	protein_coding	Wdr72	intron	ENSMUSG00000044976	ProperStrand	3	1	-inf
chr17	34089406	34089477	protein_coding	Rps18	exon	ENSMUSG00000008668	ProperStrand	111	chr13	68759738	68764669	protein_coding	Adcy2	exon	ENSMUSG00000021536	ProperStrand	237	1	-9.3249
chr9	123365957	123365975	protein_coding	Lars2	intron	ENSMUSG00000035202	NonProperStrand	4	chr17	35089182	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-11.1133
chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	chr10	80642396	80642445	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-2.1689
chr11	106405609	106405674	protein_coding	Tex2	exon	ENSMUSG00000040548	ProperStrand	24	chr4	131908236	131908292	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.9196
chr10	70054171	70054232	protein_coding	Phyhipl	intron	ENSMUSG00000037747	ProperStrand	8	chr16	23110464	23110564	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-6.3329
chr9	9430895	9430985	LINE	L1_Mus2	L1	chr9L1_Mus29430914	ProperStrand	1	chr9	9430715	9430795	Low_complexity	CT-rich	Low_complexity	chr9CT-rich9430688	ProperStrand	1	1	-inf
chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr1	137271118	137271473	protein_coding	Shisa4	exon	ENSMUSG00000041889	NonProperStrand	2	1	-13.8986
chr10	11063464	11063480	protein_coding	Epm2a	exon	ENSMUSG00000055493	ProperStrand	28	chr17	20504247	20504264	protein_coding	Vmn2r107	intron	ENSMUSG00000056910	NonProperStrand	7	1	-19.2066
chr14	56281387	56281403	protein_coding	Nedd8	exon	ENSMUSG00000010376	ProperStrand	27	chr8	13876174	13876226	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	2	-13.9259
chr6	115757991	115758111	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr4	131866618	131866675	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	2	-3.1130
chr3	87719277	87719294	protein_coding	Hdgf	utr3	ENSMUSG00000004897	ProperStrand	117	chr4	131908356	131908435	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-1.2804
chr1	36569478	36569568	protein_coding	Cnnm3	exon	ENSMUSG00000001138	ProperStrand	58	chr4	131908260	131908340	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.4677
chr9	108730277	108730293	protein_coding	Celsr3	exon	ENSMUSG00000023473	ProperStrand	31	chr11	68887036	68887062	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-5.4198
chr7	26537748	26537838	protein_coding	Hnrnpul1	intron	ENSMUSG00000040725	ProperStrand	84	chr4	131908357	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.9682
chr18	36961615	36961662	misc_RNA	Vault	.	ENSMUSG00000065145	ProperStrand	177	chrX	71589885	71589907	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	1	-7.9855
chr18	35107577	35107609	protein_coding	Hspa9	exon	ENSMUSG00000024359	ProperStrand	166	chr2	180670695	180670712	protein_coding	Nkain4	exon	ENSMUSG00000027574	NonProperStrand	2	1	-19.4800
chr13	9833580	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr6	90320122	90320217	protein_coding	Zxdc	exon	ENSMUSG00000034430	ProperStrand	10	3	-18.7273
chr12	11291928	11291944	protein_coding	Smc6	exon	ENSMUSG00000020608	ProperStrand	15	chr7	116663633	116663659	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-5.1056
chr10	90542350	90542367	protein_coding	Apaf1	exon	ENSMUSG00000019979	NonProperStrand	4	chr4	131865867	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.0048
chr14	27457705	27457775	protein_coding	Arf4	utr5	ENSMUSG00000021877	ProperStrand	14	chr9	58159696	58159713	protein_coding	Loxl1	exon	ENSMUSG00000032334	NonProperStrand	13	1	-19.5716
chr3	95142454	95142523	protein_coding	Setdb1	exon	ENSMUSG00000015697	ProperStrand	23	chr19	8799583	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	4	-inf
chr15	98362151	98362209	protein_coding	2310037I24Rik	exon	ENSMUSG00000022992	ProperStrand	91	chr4	131908236	131908344	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-4.2363
chrX	34667269	34667285	protein_coding	Nkap	exon	ENSMUSG00000016409	NonProperStrand	133	chr14	51548705	51548725	protein_coding	Tmem55b	exon	ENSMUSG00000035953	ProperStrand	14	1	-14.6877
chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	chr7	28293113	28300278	protein_coding	Prx	exon	ENSMUSG00000053198	ProperStrand	21	1	-11.3130
chr18	80324991	80325071	protein_coding	Adnp2	exon	ENSMUSG00000053950	ProperStrand	36	chr19	8963023	8963142	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	17	-inf
chr2	152706889	152707988	protein_coding	Tpx2	exon	ENSMUSG00000027469	ProperStrand	111	chrX	166427037	166427137	protein_coding	Mid1	exon	ENSMUSG00000035299	ProperStrand	209	1	-9.5758
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr3	108357359	108357426	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-0.8278
chr10	79465706	79465723	protein_coding	Abca7	exon	ENSMUSG00000035722	NonProperStrand	2	chr15	85889273	85889291	protein_coding	Gramd4	utr5	ENSMUSG00000035900	ProperStrand	39	1	-19.0965
chr17	34046570	34046670	protein_coding	Daxx	utr5	ENSMUSG00000002307	ProperStrand	26	chr1	180181220	180181236	protein_coding	Pppde1	utr3	ENSMUSG00000026502	ProperStrand	27	8	-20.5842
chr10	120709244	120712786	protein_coding	Tbc1d30	exon	ENSMUSG00000052302	ProperStrand	233	chr12	17552949	17552983	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-2.5815
chr17	13117152	13117252	protein_coding	Tcp1	exon	ENSMUSG00000068039	ProperStrand	116	chr1	162968447	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-4.7954
chr12	86685286	86695755	protein_coding	Tmed10	exon	ENSMUSG00000021248	ProperStrand	34	chr18	73693163	73693184	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-6.6464
chr7	118214863	118224472	protein_coding	Eif4g2	utr3	ENSMUSG00000005610	ProperStrand	134	chr17	24857716	24857788	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-2.1288
chr15	36794557	36794574	LINE	L1MB5	L1	chr15L1MB536794504	ProperStrand	11	chr1	71656140	71656225	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	1	-11.2889
mmu-miR-6240	2	23	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr9	60719914	60719930	protein_coding	Uaca	exon	ENSMUSG00000034485	ProperStrand	109	1	-4.7432
chr12	88778636	88778726	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	chr8	73419649	73419791	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	15	-2.9539
chr15	73587248	73587304	protein_coding	Ptp4a3	exon	ENSMUSG00000059895	ProperStrand	45	chr5	74489618	74489679	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-4.3209
chr8	3610892	3610994	protein_coding	Xab2	exon	ENSMUSG00000019470	ProperStrand	52	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-9.2140
chr4	131908756	131908895	lincRNA	Gm17300	exon	ENSMUSG00000091021	ProperStrand	109	chr11	77996557	77996626	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	NonProperStrand	3	2	-inf
chr2	127416850	127421550	protein_coding	Mrps5	intron	ENSMUSG00000027374	ProperStrand	84	chr17	24857717	24857852	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	4	-6.9320
chr3	98023350	98023367	LINE	Lx9	L1	chr3Lx998023319	ProperStrand	23	chr1	162967734	162967806	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	1	-12.1888
chr11	67475662	67484114	protein_coding	Gas7	exon	ENSMUSG00000033066	ProperStrand	9	chr7	116664870	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-6.1874
chr4	117882308	117882408	protein_coding	Ptprf	utr3	ENSMUSG00000033295	ProperStrand	337	chr1	162965986	162966036	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-0.8668
chr2	32830442	32830835	protein_coding	Slc2a8	exon	ENSMUSG00000026791	ProperStrand	26	chr4	131908804	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.5345
chr16	57391761	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr14	33005063	33005139	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	5	-2.1731
chr2	90858537	90858637	protein_coding	Celf1	utr3	ENSMUSG00000005506	ProperStrand	61	chr5	32794695	32794739	protein_coding	Ppp1cb	utr3	ENSMUSG00000014956	ProperStrand	25	1	-15.0372
chr1	66475603	66475683	protein_coding	Mtap2	intron	ENSMUSG00000015222	NonProperStrand	18	chr9	65255142	65255232	protein_coding	Rasl12	intron	ENSMUSG00000041696	NonProperStrand	1	1	-inf
chr9	40611848	40611948	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr7	150717298	150717367	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-1.0388
chr15	80748448	80748484	protein_coding	Tnrc6b	exon	ENSMUSG00000047888	ProperStrand	59	chr19	8963032	8963048	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-10.1894
chr7	13610149	13610250	protein_coding	Trim28	exon	ENSMUSG00000005566	ProperStrand	296	chr4	49072326	49072344	protein_coding	E130309F12Rik	utr5	ENSMUSG00000063446	NonProperStrand	8	1	-14.2477
chr1	92698923	92698940	protein_coding	Col6a3	exon	ENSMUSG00000048126	NonProperStrand	44	chr14	33005045	33005091	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-4.5838
chr11	95164481	95164561	protein_coding	Myst2	exon	ENSMUSG00000038909	ProperStrand	56	chr4	56910497	56910587	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-6.2430
chr2	24534735	24534815	protein_coding	Cacna1b	exon	ENSMUSG00000004113	ProperStrand	83	chr3	89842337	89842809	protein_coding	Ubap2l	exon	ENSMUSG00000042520	ProperStrand	88	1	-11.8909
chr5	35407005	35407060	protein_coding	Dok7	exon	ENSMUSG00000044716	ProperStrand	6	chr4	131865856	131865959	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	5	-20.2559
chr17	39985197	39985295	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr3	96132454	96132514	snRNA	ENSMUSG00000075978_U1	.	ENSMUSG00000075978	ProperStrand	132	1	-4.4056
chr3	88715213	88715230	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr16	43886793	43886929	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	9	-18.8116
chr11	115133300	115133504	protein_coding	Fdxr	exon	ENSMUSG00000018861	NonProperStrand	6	chr12	17552949	17553029	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-9.7905
chr13	58365557	58375447	protein_coding	Gkap1	utr5	ENSMUSG00000021552	ProperStrand	22	chr16	23110839	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.4786
chrX	71549043	71549147	protein_coding	Atp6ap1	utr3	ENSMUSG00000019087	ProperStrand	11	chr15	98350146	98350183	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-8.1573
chr10	80178638	80178680	protein_coding	Ap3d1	exon	ENSMUSG00000020198	ProperStrand	42	chr3	68889109	68889199	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-3.9169
chr1	173270379	173270464	protein_coding	Dedd	exon	ENSMUSG00000013973	ProperStrand	17	chr4	131865856	131865946	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.9909
chr16	93969348	93969438	protein_coding	Cldn14	intron	ENSMUSG00000047109	NonProperStrand	2	chrX	134787023	134787103	protein_coding	Il1rapl2	intron	ENSMUSG00000059203	NonProperStrand	23	1	-20.4378
chr9	40612885	40612905	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	chr2	130101270	130101310	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-3.0088
chr7	13610183	13610206	protein_coding	Trim28	exon	ENSMUSG00000005566	ProperStrand	296	chr13	55755831	55755847	protein_coding	Ddx46	intron	ENSMUSG00000021500	ProperStrand	87	1	-9.3690
chr19	11853632	11856112	protein_coding	Stx3	utr3	ENSMUSG00000041488	ProperStrand	37	chr15	82725599	82725636	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	3	-inf
chr8	127317113	127317129	protein_coding	Trim67	utr5	ENSMUSG00000036913	ProperStrand	43	chr4	131908688	131908807	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.7076
chr7	88529496	88529520	protein_coding	Cpeb1	intron	ENSMUSG00000025586	NonProperStrand	29	chr4	131865913	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-7.7326
chr11	116405004	116405024	protein_coding	Ube2o	exon	ENSMUSG00000020802	ProperStrand	134	chr7	52382752	52382830	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	2	-8.5007
chr2	4974190	4974207	protein_coding	Optn	exon	ENSMUSG00000026672	ProperStrand	451	chr14	76247754	76247825	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-0.8838
chr4	43505733	43505783	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr11	80965641	80965658	protein_coding	Accn1	exon	ENSMUSG00000020704	NonProperStrand	228	1	-0.9829
chrX	71589886	71589905	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr4	122970471	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-4.3334
chr11	23178318	23178707	protein_coding	Xpo1	exon	ENSMUSG00000020290	ProperStrand	123	chr10	90581034	90581111	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	2	-5.8801
chr18	10052133	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr12	112997097	112997113	protein_coding	Klc1	utr5	ENSMUSG00000021288	ProperStrand	35	1	-9.8862
chr3	95465584	95465666	protein_coding	Mcl1	utr3	ENSMUSG00000038612	ProperStrand	75	chr4	86232397	86232487	snoRNA	ENSMUSG00000088958_Scarna8	.	ENSMUSG00000088958	ProperStrand	366	1	-9.2430
chr19	6298245	6298285	protein_coding	Ehd1	exon	ENSMUSG00000024772	ProperStrand	30	chr1	45448521	45448537	protein_coding	Col5a2	exon	ENSMUSG00000026042	ProperStrand	184	1	-12.4673
mmu-miR-3535	0	21	miRNA	mmu-miR-3535	.	mmu-miR-3535	ProperStrand	15	chr4	131908687	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.5353
chr11	97581585	97581659	protein_coding	Pip4k2b	exon	ENSMUSG00000018547	ProperStrand	46	chr8	73419657	73419682	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.6165
chr8	12757420	12757437	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr8	109585722	109587590	protein_coding	Tmed6	exon	ENSMUSG00000031919	ProperStrand	4	1	-14.2634
chr11	6315894	6319559	protein_coding	Ppia	exon	ENSMUSG00000071866	ProperStrand	127	chr16	23110844	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	20	-16.6621
chr11	20202990	20203080	protein_coding	Slc1a4	utr3	ENSMUSG00000020142	ProperStrand	8	chr11	51551344	51551424	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	1	-11.8277
chrX	95853509	95853526	protein_coding	Ophn1	intron	ENSMUSG00000031214	NonProperStrand	8	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-14.5613
chr5	74489215	74489305	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr1	88248582	88248662	snoRNA	ENSMUSG00000064696_SNORD20	.	ENSMUSG00000064696	ProperStrand	89	1	-4.8559
chr10	126956000	126956198	protein_coding	Shmt2	exon	ENSMUSG00000025403	ProperStrand	94	chr5	130300417	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	5	-9.1415
chr8	73655762	73655852	SINE	RSINE1	B4	chr8RSINE173655760	NonProperStrand	1	chr7	54443415	54443505	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-inf
chr12	112689397	112689566	protein_coding	Tnfaip2	exon	ENSMUSG00000021281	ProperStrand	2	chr15	36189854	36189956	protein_coding	Rnf19a	exon	ENSMUSG00000022280	ProperStrand	9	1	-inf
chr19	8799370	8799403	snoRNA	ENSMUSG00000065280_SNORD28	.	ENSMUSG00000065280	ProperStrand	269	chr8	32260374	32260425	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-1.9475
chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	chr3	88497879	88497979	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	2	-1.6868
chr4	53873578	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	chr5	130295432	130295522	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-1.4766
chr1	60537180	60537202	protein_coding	Abi2	utr3	ENSMUSG00000026782	ProperStrand	15	chr10	110918634	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-10.0469
chr2	90235304	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	34112034	34112050	protein_coding	Letm1	exon	ENSMUSG00000005299	NonProperStrand	145	1	-2.8369
chr11	78086787	78086944	protein_coding	2610507B11Rik	exon	ENSMUSG00000010277	ProperStrand	246	chr11	106362640	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-4.6427
chr10	127878979	127879012	LTR	MT2A	ERVL	chr10MT2A127878865	NonProperStrand	5	chr16	23111460	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-5.8178
chr1	157801714	157801782	snRNA	ENSMUSG00000077419_U2	.	ENSMUSG00000077419	ProperStrand	3	chr4	131865927	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.6896
chr6	83756277	83756366	protein_coding	Paip2b	utr3	ENSMUSG00000045896	ProperStrand	19	chr2	26768368	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-7.8982
chr4	116826699	116826766	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	chrX	71517819	71517905	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	3	-2.8164
chr6	145338312	145338328	pseudogene	1700073E17Rik	.	ENSMUSG00000087204	ProperStrand	2	chr7	29136525	29136648	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-9.5181
chr3	4339069	4339118	rRNA	n-R5s194	.	ENSMUSG00000077912	ProperStrand	24	chr1	39605602	39605682	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-9.1875
chr6	92104375	92104391	protein_coding	Nr2c2	exon	ENSMUSG00000005893	ProperStrand	101	chr4	131865855	131865986	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.0305
chr17	88384788	88384926	protein_coding	Msh6	exon	ENSMUSG00000005370	ProperStrand	150	chr7	148634769	148634787	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	8	-inf
chr2	128454346	128454379	protein_coding	Anapc1	exon	ENSMUSG00000014355	ProperStrand	38	chr7	116664822	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-8.4698
chr1	20922259	20922275	protein_coding	Paqr8	utr5	ENSMUSG00000025931	NonProperStrand	60	chr15	34371048	34372410	protein_coding	Rpl30	exon	ENSMUSG00000058600	ProperStrand	65	1	-13.1546
chr13	95856366	95856384	protein_coding	Pde8b	intron	ENSMUSG00000021684	ProperStrand	43	chr4	131865867	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.3073
chr9	60719434	60719534	protein_coding	Uaca	exon	ENSMUSG00000034485	ProperStrand	109	chr4	131866614	131866673	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	2	-12.6286
chr11	120824873	120824889	protein_coding	Csnk1d	utr3	ENSMUSG00000025162	NonProperStrand	10	chr4	131908752	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.3231
chr12	117641454	117641472	LTR	RLTR6-int	ERV1	chr12RLTR6-int117641117	ProperStrand	19	chr8	73419657	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-12.6014
chr17	13116203	13116225	protein_coding	Tcp1	exon	ENSMUSG00000068039	ProperStrand	116	chr4	131908688	131908779	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-1.0565
chrX	72214248	72214264	protein_coding-noncoding	Gab3	utr3	ENSMUSG00000032750	ProperStrand	420	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-1.0191
chr7	29600602	29600640	protein_coding-noncoding	Hnrnpl	utr5	ENSMUSG00000015165	ProperStrand	23	chr1	39605591	39605693	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	5	-inf
chr3	137849424	137849440	protein_coding	4930579F01Rik	utr5	ENSMUSG00000012042	NonProperStrand	156	chr3	108357255	108357371	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-2.7801
chr5	74489541	74489605	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr15	71624780	71624798	snoRNA	ENSMUSG00000088895_SNORA81	.	ENSMUSG00000088895	ProperStrand	348	3	-6.2768
chr19	46078701	46078729	protein_coding	Hps6	exon	ENSMUSG00000074811	ProperStrand	56	chr14	33005094	33005139	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	2	-6.9168
chr16	57391760	57391792	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr10	41644311	41644329	protein_coding	Armc2	exon	ENSMUSG00000071324	ProperStrand	281	1	-4.7630
chr15	83630589	83630607	protein_coding	Mpped1	exon	ENSMUSG00000041708	ProperStrand	6	chr2	32818816	32818906	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	2	-16.3027
chr6	148303595	148303617	protein_coding	Rps4y2	exon	ENSMUSG00000063171	ProperStrand	47	chr9	120039565	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.7695
chr9	118835885	118835902	protein_coding	Ctdspl	utr5	ENSMUSG00000047409	NonProperStrand	9	chr1	162967490	162967510	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-7.2161
chr3	96527940	96527956	protein_coding	Polr3c	exon	ENSMUSG00000028099	NonProperStrand	75	chr11	62416578	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-4.7351
chr12	74385883	74385919	protein_coding	Trmt5	exon	ENSMUSG00000034442	ProperStrand	4	chr4	131908689	131908797	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-10.6778
chr15	98268677	98268693	protein_coding	Olfr282	exon	ENSMUSG00000063780	NonProperStrand	1	chr19	8799582	8799638	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-inf
mmu-miR-1949	0	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr4	131865855	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	10	-0.9222
chr16	55904822	55904838	protein_coding	Cep97	utr3	ENSMUSG00000022604	ProperStrand	22	chr18	35714208	35714292	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	3	-12.6574
chr9	64022854	64022941	protein_coding	Rpl4	intron	ENSMUSG00000032399	ProperStrand	608	chrX	71517908	71517951	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-2.2249
chr19	42225881	42225897	protein_coding	Marveld1	utr3	ENSMUSG00000044345	NonProperStrand	112	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-7.6800
chr1	88425767	88427212	protein_coding	Ptma	utr3	ENSMUSG00000026238	ProperStrand	385	chr18	35716685	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-1.1554
chr9	64023677	64023748	snoRNA	ENSMUSG00000064918_SNORD18	.	ENSMUSG00000064918	ProperStrand	370	chr5	74489593	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	2	-1.7480
chr5	33181384	33181409	protein_coding	C330019G07Rik	intron	ENSMUSG00000054280	ProperStrand	22	chr2	32818866	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	2	-12.0156
chr4	131865885	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr2	18508668	18508716	tRNA	tRNA1947-AsnGTT	.	220290	ProperStrand	179	3	-1.6951
chr9	58005602	58005619	protein_coding	Islr	exon	ENSMUSG00000037206	NonProperStrand	11	chr18	67954412	67954479	protein_coding	Seh1l	utr3	ENSMUSG00000079614	ProperStrand	19	1	-18.7445
chr17	34188474	34188570	protein_coding	Col11a2	exon	ENSMUSG00000024330	ProperStrand	14	chr19	6318393	6318416	protein_coding	Cdc42bpg	exon	ENSMUSG00000024769	ProperStrand	90	1	-15.4604
chr2	90235319	90235336	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	96020034	96020052	protein_coding	Gk5	intron	ENSMUSG00000041440	ProperStrand	7	1	-8.8025
chr19	8948176	8948647	protein_coding	Ubxn1	exon	ENSMUSG00000071655	ProperStrand	68	chr4	131908810	131908890	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.0584
chr8	18669740	18669830	protein_coding	Mcph1	intron	ENSMUSG00000039842	ProperStrand	34	chr16	23111376	23111456	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.1231
chr18	35403766	35404385	protein_coding	Ctnna1	exon	ENSMUSG00000037815	ProperStrand	115	chr9	15119646	15119736	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.5754
chr2	34660450	34660492	protein_coding-noncoding	Fbxw2	utr3	ENSMUSG00000035949	NonProperStrand	10	chr1	162965531	162965595	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-15.7866
chr7	88927465	88927931	protein_coding	3110040N11Rik	utr3	ENSMUSG00000025102	ProperStrand	2	chr9	15119650	15119677	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-9.8289
chrX	84483698	84483751	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	4	-8.2104
chr14	56159295	56159314	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	chr11	83107805	83107897	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	3	-14.7761
chr12	112867193	112867265	protein_coding	Mark3	exon	ENSMUSG00000007411	ProperStrand	37	chr14	33005139	33005203	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	5	-18.4997
chr17	32292983	32293035	protein_coding	Notch3	exon	ENSMUSG00000038146	ProperStrand	181	chr18	59441773	59441793	protein_coding	Chsy3	intron	ENSMUSG00000058152	ProperStrand	35	1	-12.1877
chr19	56893475	56893518	protein_coding	A630007B06Rik	intron	ENSMUSG00000035173	ProperStrand	11	chr16	23110909	23110940	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.6241
chr12	111783993	111784046	protein_coding	Ppp2r5c	exon	ENSMUSG00000017843	ProperStrand	36	chr7	116663746	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.4225
chr11	52066989	52067089	protein_coding	Tcf7	utr3	ENSMUSG00000000782	ProperStrand	24	chr7	118219574	118219639	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-5.9542
chr4	149021741	149021790	protein_coding	Clstn1	utr3	ENSMUSG00000039953	ProperStrand	173	chr3	108200014	108200030	protein_coding	Celsr2	exon	ENSMUSG00000068740	NonProperStrand	20	1	-13.4161
chr2	79132657	79132677	protein_coding-noncoding	Itga4	utr5	ENSMUSG00000027009	NonProperStrand	118	chr2	26493366	26493476	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-2.5298
mmu-miR-5100	5	20	miRNA	mmu-miR-5100	.	mmu-miR-5100	ProperStrand	132	chr18	73693113	73693137	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-4.0113
chr10	98477569	98477616	protein_coding	Atp2b1	exon	ENSMUSG00000019943	ProperStrand	31	chr1	180263227	180263764	protein_coding	Hnrnpu	exon	ENSMUSG00000039630	ProperStrand	286	2	-18.1627
chr1	89122515	89122699	protein_coding	Eif4e2	exon	ENSMUSG00000026254	ProperStrand	26	chr19	8800361	8800441	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-5.1258
chr5	24214584	24214649	protein_coding	Nub1	exon	ENSMUSG00000028954	ProperStrand	32	chr9	120038031	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	2	-9.6829
chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	chr19	8963027	8963174	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-0.9079
chr2	65528374	65605287	protein_coding	Scn2a1	exon	ENSMUSG00000075318	NonProperStrand	11	chr11	69483136	69483237	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-9.3712
chr8	37640224	37640302	protein_coding	Dlc1	exon	ENSMUSG00000031523	ProperStrand	89	chr18	35716792	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.5511
chr2	90235298	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	150354115	150354133	protein_coding	Wdr95	intron	ENSMUSG00000029658	ProperStrand	1	1	-inf
chr9	123082737	123082753	protein_coding	Cdcp1	exon	ENSMUSG00000035498	NonProperStrand	3	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-inf
chr7	91766451	91766551	protein_coding	Zfand6	intron	ENSMUSG00000030629	ProperStrand	11	chr1	162967535	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-11.0888
chr4	131399490	131399506	protein_coding	Mecr	exon	ENSMUSG00000028910	NonProperStrand	109	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.2352
chr18	10052128	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr9	64024009	64025572	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	3	-10.2313
chrX	159216562	159216660	protein_coding	Rbbp7	utr3	ENSMUSG00000031353	ProperStrand	48	chr2	85330581	85330599	protein_coding	4833423E24Rik	exon	ENSMUSG00000075217	NonProperStrand	4	3	-20.3085
chr11	108783076	108783093	protein_coding	Axin2	utr5	ENSMUSG00000000142	NonProperStrand	81	chr11	106362640	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-6.8081
chr12	105906806	105906881	LTR	MTE2b	MaLR	chr12MTE2b105906785	ProperStrand	1	chr3	68889049	68889139	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-inf
chr7	13516165	13516208	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr8	129468746	129468879	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	2	-1.4291
chr7	105271409	105271481	protein_coding	Capn5	utr3	ENSMUSG00000035547	ProperStrand	99	chr4	122968679	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	3	-12.3789
chr2	70708007	70708024	SINE	B3A	B2	chr2B3A70707895	ProperStrand	15	chr16	23111446	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.5828
chr13	76341035	76341054	protein_coding	Fam81b	intron	ENSMUSG00000078966	NonProperStrand	220	chr9	15130707	15130744	snoRNA	ENSMUSG00000077506_Scarna9	.	ENSMUSG00000077506	ProperStrand	148	1	-8.8986
chr7	142889343	142889373	protein_coding	Mki67	exon	ENSMUSG00000031004	ProperStrand	286	chr11	68853922	68853960	tRNA	tRNA396-ProCGG	.	189182	ProperStrand	48	1	-10.6327
chr4	131826037	131826127	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	chr3	85944567	85944584	snoRNA	ENSMUSG00000064390_Rnu73b	.	ENSMUSG00000064390	ProperStrand	164	1	-7.2124
chr3	94837677	94837862	protein_coding	Psmd4	exon	ENSMUSG00000005625	ProperStrand	20	chr17	24857717	24857807	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	5	-17.6789
chr2	90235289	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	35089181	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	10	-1.5562
chr5	121656789	121656817	protein_coding	Rpl6	exon	ENSMUSG00000029614	ProperStrand	332	chr1	72290865	72290973	snRNA	ENSMUSG00000093111_AC120136.1	.	ENSMUSG00000093111	ProperStrand	137	3	-18.1852
chr7	28146782	28146798	protein_coding	Spnb4	exon	ENSMUSG00000011751	NonProperStrand	84	chr9	14521224	14521241	protein_coding	Piwil4	intron	ENSMUSG00000036912	ProperStrand	24	1	-14.4995
chr11	69550787	69550829	protein_coding	Polr2a	exon	ENSMUSG00000005198	ProperStrand	200	chr11	77995191	77995247	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-3.8647
chr15	36531082	36532613	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr2	158451026	158451043	protein_coding	Actr5	exon	ENSMUSG00000037761	NonProperStrand	94	2	-11.2426
chr8	106785455	106787190	protein_coding	Cklf	exon	ENSMUSG00000054400	ProperStrand	5	chr9	120038613	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-8.0049
chr4	41413918	41413986	protein_coding	Nudt2	intron	ENSMUSG00000028443	ProperStrand	6	chr16	23110828	23110890	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-14.1985
chr18	24444611	24444670	protein_coding	Galnt1	utr3	ENSMUSG00000000420	ProperStrand	158	chr5	130300474	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-3.2956
chrX	158447711	158447728	protein_coding	Nhs	intron	ENSMUSG00000059493	NonProperStrand	50	chr7	29136525	29136600	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.6778
chr13	96100618	96100718	protein_coding	Zbed3	intron	ENSMUSG00000041995	ProperStrand	33	chr1	162967528	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.6031
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr18	35989455	35989557	protein_coding	Cxxc5	utr5	ENSMUSG00000046668	ProperStrand	30	2	-16.2128
chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	chr7	142889633	142889672	protein_coding	Mki67	exon	ENSMUSG00000031004	ProperStrand	286	1	-6.4726
chr7	19590197	19590213	protein_coding	Irf2bp1	exon	ENSMUSG00000044030	NonProperStrand	81	chr2	153050783	153050799	protein_coding	Tspyl3	exon	ENSMUSG00000074671	ProperStrand	228	1	-10.0333
chr18	32405206	32405222	protein_coding	Ercc3	exon	ENSMUSG00000024382	ProperStrand	280	chr19	8963027	8963083	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-0.7649
chr17	88384626	88384706	protein_coding	Msh6	exon	ENSMUSG00000005370	ProperStrand	150	chr4	131866184	131866274	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-2.0607
chr2	127652734	127652822	protein_coding	Bub1	intron	ENSMUSG00000027379	ProperStrand	26	chr1	162966000	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-5.2030
chr17	51877559	51877575	protein_coding	Satb1	utr3	ENSMUSG00000023927	ProperStrand	62	chr7	29136552	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.3097
chr1	162153058	162153085	protein_coding	Rabgap1l	utr3	ENSMUSG00000026721	ProperStrand	44	chr11	6520321	6520364	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	1	-8.3385
chr11	96133152	96133172	protein_coding	Hoxb9	exon	ENSMUSG00000020875	NonProperStrand	22	chr8	72287172	72287188	protein_coding	Zfp866	utr3	ENSMUSG00000043090	NonProperStrand	134	1	-13.7341
chr7	116663659	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	chr11	68924472	68924505	tRNA	tRNA400-SerCGA	.	1012197	ProperStrand	7	1	-6.6732
chr15	7116941	7116970	protein_coding	Lifr	exon	ENSMUSG00000054263	ProperStrand	64	chr11	97642952	97643014	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.3622
chr10	86165662	86165725	protein_coding	Hsp90b1	exon	ENSMUSG00000020048	ProperStrand	396	chr15	10390891	10390912	protein_coding	Dnajc21	exon	ENSMUSG00000044224	ProperStrand	17	1	-12.0933
chr11	4573332	4573386	protein_coding	Ascc2	exon	ENSMUSG00000020412	ProperStrand	27	chr11	82110110	82110127	protein_coding	Ccl1	intron	ENSMUSG00000020702	NonProperStrand	9	2	-20.1562
chr17	35119394	35119433	protein_coding-noncoding	Lsm2	utr5	ENSMUSG00000007050	ProperStrand	1	chr1	162967489	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-inf
chr9	55059044	55059134	protein_coding	Fbxo22	intron	ENSMUSG00000032309	ProperStrand	79	chr7	134671398	134671478	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	4	-21.3064
chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	chr8	87523002	87523050	protein_coding	Hook2	intron	ENSMUSG00000052566	ProperStrand	204	1	-6.7515
chr5	116082050	116082066	protein_coding	Rab35	utr5	ENSMUSG00000029518	NonProperStrand	1	chr11	5180669	5180685	protein_coding	Znrf3	utr3	ENSMUSG00000041961	NonProperStrand	210	1	-inf
chr7	135076553	135076570	protein_coding	Prss36	exon	ENSMUSG00000070371	ProperStrand	7	chr11	62416575	62416650	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-9.5351
chr13	58229771	58229851	protein_coding	Hnrnpa0	utr5	ENSMUSG00000007836	ProperStrand	110	chr9	120039588	120039678	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.2589
chrX	54751845	54751861	protein_coding	Gpr101	utr3	ENSMUSG00000036357	ProperStrand	24	chr7	29136525	29136609	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-6.7993
chr19	30175232	30175314	protein_coding	Gldc	exon	ENSMUSG00000024827	ProperStrand	175	chr15	73416617	73416633	protein_coding	Slc45a4	exon	ENSMUSG00000079020	ProperStrand	127	1	-9.6611
chr2	168704986	168705007	LTR	RLTR25B	ERVK	chr2RLTR25B168704923	NonProperStrand	8	chrX	70932351	70932367	protein_coding	Bcap31	intron	ENSMUSG00000002015	ProperStrand	21	1	-18.3903
chr5	44006988	44007004	protein_coding	C1qtnf7	exon	ENSMUSG00000061535	ProperStrand	22	chr8	73419743	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-5.0290
chr6	125121461	125121490	protein_coding	Ncapd2	exon	ENSMUSG00000038252	ProperStrand	170	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-6.1146
chr9	65044376	65044476	snRNA	ENSMUSG00000075763_U5	.	ENSMUSG00000075763	ProperStrand	216	chr11	69483136	69483207	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-1.3520
chr4	99801239	99801258	protein_coding	Ror1	intron	ENSMUSG00000035305	NonProperStrand	31	chr4	131865855	131865915	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.8751
chr12	101623921	101624001	protein_coding	Ttc7b	intron	ENSMUSG00000033530	ProperStrand	49	chr15	34370545	34370601	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-6.6194
chr3	151985420	151996514	protein_coding	Fam73a	exon	ENSMUSG00000054942	ProperStrand	34	chr10	23505156	23505236	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.0925
chr5	124966699	124966735	protein_coding	Rilpl1	intron	ENSMUSG00000029392	ProperStrand	10	chr16	23111778	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-8.7017
chr7	119934377	119934428	protein_coding	Tead1	intron	ENSMUSG00000055320	ProperStrand	217	chr3	108357300	108357390	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	3	-5.9619
chr7	19590197	19590213	protein_coding	Irf2bp1	exon	ENSMUSG00000044030	NonProperStrand	81	chr11	4043338	4043354	protein_coding	Ccdc157	utr3	ENSMUSG00000051427	ProperStrand	11	1	-16.1466
chr6	29325637	29325727	protein_coding	Calu	utr3	ENSMUSG00000029767	ProperStrand	47	chr12	55797769	55797849	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	1	-8.1861
chr9	57809783	57809882	protein_coding	Sema7a	utr3	ENSMUSG00000038264	ProperStrand	43	chr18	35716764	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	6	-15.5270
chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	chr9	110310603	110310632	protein_coding	Ptpn23	utr5	ENSMUSG00000036057	ProperStrand	34	1	-11.4226
chr8	98393494	98394715	protein_coding	Got2	exon	ENSMUSG00000031672	ProperStrand	85	chr4	131908689	131908710	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-2.6906
chr2	32489771	32489867	protein_coding	Ak1	utr3	ENSMUSG00000026817	ProperStrand	33	chr7	116663719	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.5837
chr17	92440259	92440276	LTR	RLTR10-int	ERVK	chr17RLTR10-int92439655	NonProperStrand	4	chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	1	-14.4356
chr1	89609810	89611658	protein_coding	Inpp5d	exon	ENSMUSG00000026288	ProperStrand	75	chr5	74489574	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	19	-20.6522
chr17	65252656	65252674	LINE	L2c	L2	chr17L2c65252595	NonProperStrand	1	chr1	162965531	162965571	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-inf
chr18	24773701	24784692	protein_coding	Elp2	exon	ENSMUSG00000024271	ProperStrand	46	chr4	131908689	131908884	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-4.6663
chr2	37825099	37825171	protein_coding	Dennd1a	intron	ENSMUSG00000035392	ProperStrand	24	chr10	23505152	23505204	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-12.6106
chrX	47010174	47010192	LINE	Lx5	L1	chrXLx547009666	NonProperStrand	2	chr17	24857717	24857795	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-inf
chrX	148369104	148369152	protein_coding	Huwe1	utr3	ENSMUSG00000025261	ProperStrand	501	chr13	113789095	113789112	protein_coding	Gm6320	exon	ENSMUSG00000074651	ProperStrand	26	1	-10.7539
chr15	101912457	101923446	protein_coding	Eif4b	exon	ENSMUSG00000058655	ProperStrand	484	chr17	24857717	24857844	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	8	-3.4455
chr5	144081978	144082008	protein_coding	Zdhhc4	exon	ENSMUSG00000001844	ProperStrand	6	chr11	69483190	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-16.4842
chr12	87546205	87546224	LTR	MTD	MaLR	chr12MTD87546114	ProperStrand	1	chr16	11144176	11144276	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	1	-inf
chr18	78032630	78032646	lincRNA	F830208F22Rik	exon	ENSMUSG00000073529	ProperStrand	16	chr4	131908300	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.6705
chr4	140878169	140878241	protein_coding	Epha2	exon	ENSMUSG00000006445	ProperStrand	148	chr2	26493374	26493442	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	4	-8.0130
chr4	137813143	137813162	protein_coding	Sh2d5	exon	ENSMUSG00000045349	NonProperStrand	31	chr1	162967544	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.7242
chr7	132883952	132884042	protein_coding	D430042O09Rik	intron	ENSMUSG00000032743	ProperStrand	1	chr11	68886928	68887008	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-inf
chr15	34370545	34370636	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	chr15	71624755	71624796	snoRNA	ENSMUSG00000088895_SNORA81	.	ENSMUSG00000088895	ProperStrand	348	9	-12.3575
chr13	90013406	90013496	lincRNA	Gm4117	intron	ENSMUSG00000089940	ProperStrand	2	chr13	67807714	67807794	protein_coding	Zfp71-rs1	utr3	ENSMUSG00000071281	NonProperStrand	7	1	-inf
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr19	6986147	6986191	protein_coding	Esrra	utr3	ENSMUSG00000024955	ProperStrand	6	1	-13.5484
chr8	125626829	125627084	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	chr11	68886963	68887041	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-1.7841
chr1	78485883	78485973	SINE	B1_Mur4	Alu	chr1B1_Mur478485880	NonProperStrand	1	chr17	28490684	28490717	protein_coding	Tulp1	exon	ENSMUSG00000037446	ProperStrand	10	1	-inf
chr9	15130900	15130990	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	chr12	17553000	17553080	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-1.4795
chr1	20738561	20738641	LINE	Lx7	L1	chr1Lx720738508	ProperStrand	1	chr1	21340029	21340119	protein_coding	Khdc1a	utr5	ENSMUSG00000067750	ProperStrand	1	1	-inf
chr7	148443265	148443334	protein_coding	Phrf1	exon	ENSMUSG00000038611	ProperStrand	86	chr17	13112507	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	4	-12.7091
chr14	63770029	63770070	protein_coding	Fdft1	exon	ENSMUSG00000021273	ProperStrand	37	chr5	130300419	130300509	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.3697
chr15	95144590	95144607	protein_coding	Nell2	intron	ENSMUSG00000022454	ProperStrand	64	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.6688
chr7	133939743	133939789	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	chr9	21602970	21602986	protein_coding	Kank2	utr5	ENSMUSG00000032194	ProperStrand	196	1	-5.9946
chr17	36063453	36063513	protein_coding	Ppp1r10	exon	ENSMUSG00000039220	ProperStrand	45	chr4	131908236	131908279	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.8531
chr18	58050499	58050515	protein_coding	Slc12a2	intron	ENSMUSG00000024597	ProperStrand	20	chr16	23110454	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.4825
chr6	6604155	6604174	lincRNA	RP24-129K7.2	exon	ENSMUSG00000093675	NonProperStrand	6	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-14.1985
chr16	20662257	20662273	protein_coding	Psmd2	exon	ENSMUSG00000006998	ProperStrand	99	chr11	69483191	69483237	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.6425
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr12	44844107	44844152	snoRNA	ENSMUSG00000065004_SNORA33	.	ENSMUSG00000065004	ProperStrand	111	1	-7.3659
chr19	53286868	53286886	protein_coding	Add3	intron	ENSMUSG00000025026	NonProperStrand	13	chr10	110918601	110918693	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	4	-20.3013
chr2	163450609	163450684	protein_coding	Serinc3	utr3	ENSMUSG00000017707	ProperStrand	28	chr5	30111576	30111649	protein_coding	Dnajb6	exon	ENSMUSG00000029131	ProperStrand	81	1	-14.2546
chr4	133687106	133687196	protein_coding	Ccdc21	utr3	ENSMUSG00000037443	ProperStrand	112	chr13	108873589	108873669	protein_coding	Ndufaf2	intron	ENSMUSG00000068184	ProperStrand	11	1	-15.5125
chr15	20132442	20132532	LINE	Lx3B	L1	chr15Lx3B20132296	NonProperStrand	1	chr9	36509012	36509092	LINE	Lx3_Mus	L1	chr9Lx3_Mus36508320	NonProperStrand	1	1	-inf
chr17	8542310	8542328	protein_coding	Sft2d1	intron	ENSMUSG00000073468	ProperStrand	30	chr7	29136525	29136583	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.6017
chrX	156315498	156315519	protein_coding	Sh3kbp1	intron	ENSMUSG00000040990	ProperStrand	67	chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	1	-9.6104
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr4	116827121	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-1.3335
chr2	173102129	173102147	Low_complexity	GC_rich	Low_complexity	chr2GC_rich173102067	NonProperStrand	5	chr16	23111392	23111482	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-5.8178
chr8	75248027	75249490	protein_coding	Sin3b	exon	ENSMUSG00000031622	ProperStrand	66	chrX	98484793	98485397	protein_coding	Med12	exon	ENSMUSG00000079487	ProperStrand	79	2	-19.1888
chr4	147129503	147129585	protein_coding	Gm13157	exon	ENSMUSG00000078495	ProperStrand	13	chr8	32260335	32260385	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-7.6754
chrX	139401162	139401221	protein_coding	Ammecr1	exon	ENSMUSG00000042225	ProperStrand	4	chr16	98168829	98168845	protein_coding	Zfp295	utr3	ENSMUSG00000046962	ProperStrand	63	1	-19.2541
chr7	86596478	86596494	protein_coding	Polg	exon	ENSMUSG00000039176	ProperStrand	93	chr2	70927899	70927915	protein_coding	Dcaf17	exon	ENSMUSG00000041966	NonProperStrand	89	1	-11.6405
chr17	27559699	27572672	protein_coding	Grm4	utr3	ENSMUSG00000063239	ProperStrand	147	chr16	23110454	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-2.1399
chr15	101356004	101356023	protein_coding	Krt84	utr3	ENSMUSG00000044294	NonProperStrand	2	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	2	-inf
chr13	47302777	47302795	protein_coding	Rnf144b	exon	ENSMUSG00000038068	ProperStrand	3	chr19	8963032	8963048	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-16.5872
chr17	78599990	78600006	protein_coding	Crim1	utr5	ENSMUSG00000024074	ProperStrand	19	chr9	72858149	72858196	protein_coding	Ccpg1	exon	ENSMUSG00000034563	ProperStrand	8	2	-19.2864
chr8	13877862	13879659	protein_coding	Zfp828	exon	ENSMUSG00000047710	ProperStrand	32	chr16	23110860	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-3.1962
chr12	16582520	16582545	protein_coding	Lpin1	intron	ENSMUSG00000020593	ProperStrand	15	chr17	35087897	35087960	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-7.9703
chr7	94023890	94023906	LTR	RLTR1B-int	ERV1	chr7RLTR1B-int94022684	NonProperStrand	15	chr11	62416600	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-12.7577
chr8	12398028	12398113	protein_coding	Gm5607	intron	ENSMUSG00000047935	ProperStrand	11	chr10	23505559	23505593	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	2	-17.2931
chr11	50122401	50124306	protein_coding	Canx	exon	ENSMUSG00000020368	ProperStrand	296	chr18	75161562	75161586	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-4.0998
chr13	15236918	15236937	LTR	MTEb	MaLR	chr13MTEb15236876	NonProperStrand	1	chr10	110918644	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-inf
chr2	166867120	166867183	protein_coding	Znfx1	intron	ENSMUSG00000039501	ProperStrand	32	chr4	131865866	131865966	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.8186
chr6	124653067	124653111	protein_coding	Lpcat3	exon	ENSMUSG00000004270	ProperStrand	19	chr7	52233639	52234883	protein_coding	Prmt1	exon	ENSMUSG00000052429	ProperStrand	21	1	-17.6106
chr6	124864139	124864207	protein_coding	Ptms	utr3	ENSMUSG00000030122	ProperStrand	21	chr10	60692417	60692433	protein_coding	Adamts14	exon	ENSMUSG00000059901	NonProperStrand	127	1	-13.9428
chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	chr8	74999076	74999095	protein_coding	Cherp	utr5	ENSMUSG00000052488	NonProperStrand	4	1	-13.8453
chrX	12869760	12869776	protein_coding	Ddx3x	utr3	ENSMUSG00000000787	ProperStrand	67	chr12	88223369	88223432	protein_coding	6430527G18Rik	exon	ENSMUSG00000034168	ProperStrand	46	1	-13.6256
chr1	37543585	37543602	protein_coding	Mgat4a	intron	ENSMUSG00000026110	NonProperStrand	12	chr9	70960077	70960093	protein_coding	Aqp9	exon	ENSMUSG00000032204	NonProperStrand	118	1	-15.2500
chr14	121315333	121315349	protein_coding	Ipo5	intron	ENSMUSG00000030662	ProperStrand	135	chr6	71832638	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-4.0529
chr5	102092856	102092872	protein_coding	Nkx6-1	exon	ENSMUSG00000035187	NonProperStrand	10	chr6	71832634	71832685	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-9.2340
chr11	69037669	69037685	protein_coding	Gucy2e	exon	ENSMUSG00000020890	NonProperStrand	99	chr9	78326774	78326827	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-5.3524
chr9	79915104	79915120	protein_coding	Senp6	utr5	ENSMUSG00000034252	ProperStrand	110	chr16	23111447	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-1.1893
chr17	86399748	86399809	protein_coding	Srbd1	utr5	ENSMUSG00000024135	ProperStrand	16	chr17	13115741	13115785	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	2	-16.1376
chr2	93873066	93873156	protein_coding	Hsd17b12	utr3	ENSMUSG00000027195	ProperStrand	28	chrX	34622939	34623019	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-4.6018
chr11	48630735	48630784	protein_coding	Trim41	utr5	ENSMUSG00000040365	ProperStrand	11	chr2	26768397	26768433	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	2	-14.4371
chrX	71281303	71281326	protein_coding	Mecp2	exon	ENSMUSG00000031393	ProperStrand	7	chr4	131865864	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.7768
chr12	88791134	88791196	protein_coding	Snw1	utr3	ENSMUSG00000021039	ProperStrand	36	chr7	134671415	134671505	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-8.8974
chr9	110843302	110848528	protein_coding	Tdgf1	exon	ENSMUSG00000032494	ProperStrand	218	chr16	23110897	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	12	-2.1527
chr14	76247705	76247842	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	chr8	129468741	129468871	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	21	-2.0440
chr5	74489621	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	chr13	21292108	21292158	tRNA	tRNA65-LeuCAA	.	1356451	ProperStrand	57	1	-3.8739
chr11	120148960	120148976	protein_coding	Bahcc1	exon	ENSMUSG00000039741	NonProperStrand	268	chr1	162965530	162965552	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-0.9257
chr9	70298130	70298187	protein_coding	Rnf111	exon	ENSMUSG00000032217	ProperStrand	33	chr7	91258331	91258347	protein_coding	Fam108c	utr3	ENSMUSG00000038459	NonProperStrand	65	1	-14.3597
chr3	85941962	85941981	protein_coding	Rps3a	exon	ENSMUSG00000028081	ProperStrand	177	chr5	108334239	108334335	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	4	-9.8157
chr5	77738902	77738918	protein_coding	Noa1	exon	ENSMUSG00000036285	ProperStrand	147	chr7	51505225	51505258	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	1	-6.3728
chr6	67485028	67485044	protein_coding	Tacstd2	exon	ENSMUSG00000051397	ProperStrand	5	chr1	89681253	89681343	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-10.5581
chr1	56907122	56907139	protein_coding	Satb2	exon	ENSMUSG00000038331	NonProperStrand	24	chr4	131865866	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.3401
chr5	74489201	74489263	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr2	9985901	9985917	protein_coding	Atp5c1	exon	ENSMUSG00000025781	ProperStrand	138	1	-4.0221
chr8	87366156	87366249	protein_coding	Calr	utr3	ENSMUSG00000003814	ProperStrand	232	chr10	117126998	117127014	protein_coding	Mdm2	utr3	ENSMUSG00000020184	ProperStrand	17	3	-21.7611
chr6	4029062	4029103	protein_coding	Bet1	intron	ENSMUSG00000032757	ProperStrand	6	chr10	23505151	23505204	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-9.1162
chr3	121967811	121969146	protein_coding	Gclm	exon	ENSMUSG00000028124	ProperStrand	31	chr4	40888687	40888724	protein_coding	Bag1	intron	ENSMUSG00000028416	ProperStrand	5	1	-18.6119
chr7	123308001	123314221	protein_coding	Plekha7	exon	ENSMUSG00000045659	ProperStrand	66	chr1	162967515	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-3.3001
chr9	23211249	23211268	protein_coding	Bmper	exon	ENSMUSG00000031963	ProperStrand	16	chr17	13112468	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-7.1974
chr2	24825186	24827046	protein_coding	Wdr85	exon	ENSMUSG00000026975	ProperStrand	323	chr4	121870882	122132508	pseudogene	Gm12896	.	ENSMUSG00000083558	NonProperStrand	19	2	-20.1242
chr13	55800721	55800772	protein_coding	B230219D22Rik	exon	ENSMUSG00000045767	ProperStrand	19	chr16	23110867	23110913	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7016
chr9	14224430	14224520	LTR	MERVL-int	ERVL	chr9MERVL-int14224383	NonProperStrand	1	chrY	1541688	1541778	LTR	MERVL-int	ERVL	chrYMERVL-int1541524	NonProperStrand	1	1	-inf
chr10	67564651	67564684	protein_coding	Arid5b	exon	ENSMUSG00000019947	ProperStrand	43	chr15	78828453	78828503	protein_coding	Triobp	intron	ENSMUSG00000033088	ProperStrand	29	1	-15.4873
chr17	35089180	35089210	processed_transcript	1110038B12Rik	.	ENSMUSG00000092203	ProperStrand	126	chr14	76247711	76247844	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-4.8892
chr11	53075898	53076410	protein_coding	Hspa4	exon	ENSMUSG00000020361	NonProperStrand	7	chr9	110034618	110034718	protein_coding	Smarcc1	utr5	ENSMUSG00000032481	NonProperStrand	5	2	-19.9996
chr17	95160908	95218242	protein_coding	2610044O15Rik	exon	ENSMUSG00000066057	NonProperStrand	70	chr9	15118323	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	4	-10.8643
chr18	34659469	34666235	protein_coding	Fam13b	utr5	ENSMUSG00000036501	ProperStrand	30	chr2	26494720	26494800	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	4	-14.1772
chrX	20259701	20259790	protein_coding	Uba1	utr3	ENSMUSG00000001924	ProperStrand	156	chr5	99443584	99443601	protein_coding	Prkg2	intron	ENSMUSG00000029334	NonProperStrand	57	1	-11.4989
chr11	106362304	106362325	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	chr7	51505511	51505591	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	3	-4.8875
chr5	111082720	111082737	protein_coding	Ddx51	exon	ENSMUSG00000029504	ProperStrand	54	chr19	8963027	8963104	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.4527
chr1	123456802	123457868	protein_coding	Ddx18	exon	ENSMUSG00000001674	ProperStrand	41	chr11	99885311	99885327	protein_coding	Krt33b	exon	ENSMUSG00000057723	NonProperStrand	352	1	-10.5359
chr16	98097890	98097968	protein_coding	C2cd2	exon	ENSMUSG00000045975	ProperStrand	9	chr4	131865891	131865981	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.2544
chr12	43637871	43637889	LINE	L1_Mur3	L1	chr12L1_Mur343637675	ProperStrand	1	chr5	118405194	118405230	protein_coding	Nos1	utr3	ENSMUSG00000029361	ProperStrand	11	1	-inf
chr2	35576097	35576177	protein_coding	Dab2ip	exon	ENSMUSG00000026883	ProperStrand	93	chr4	122968584	122968674	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-5.4212
chr11	106362304	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	chr10	23506278	23506339	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	3	-2.0599
chr1	74521711	74526245	protein_coding	Usp37	exon	ENSMUSG00000033364	ProperStrand	47	chr8	98269959	98270005	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-6.0214
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr3	46250662	46250678	protein_coding	Pabpc4l	exon	ENSMUSG00000090919	ProperStrand	137	1	-2.9369
chr19	8799052	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	chr12	110887828	110887893	snoRNA	ENSMUSG00000084549_SNORD113	.	ENSMUSG00000084549	ProperStrand	196	1	-3.5713
chr7	19661613	19661703	protein_coding	Dmwd	utr5	ENSMUSG00000030410	ProperStrand	41	chr15	79913290	79913378	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.3083
chr11	67005924	67005940	protein_coding	Myh2	exon	ENSMUSG00000033196	ProperStrand	66	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-5.0266
chr2	154171683	154171700	protein_coding	Cdk5rap1	exon	ENSMUSG00000027487	ProperStrand	75	chr1	88247816	88247876	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-4.6663
chr4	117883265	117883365	protein_coding	Ptprf	exon	ENSMUSG00000033295	ProperStrand	337	chr7	108440949	108440967	protein_coding	Atg16l2	intron	ENSMUSG00000047767	ProperStrand	121	1	-8.4512
chr7	151765212	151765228	antisense	Gm10574	.	ENSMUSG00000073778	ProperStrand	357	chr8	72856881	72856904	protein_coding	Upf1	exon	ENSMUSG00000058301	ProperStrand	90	2	-14.1606
chr4	43505657	43505721	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr9	117970853	117970891	protein_coding	Azi2	utr3	ENSMUSG00000039285	ProperStrand	12	1	-6.1793
chr7	31094573	31095015	protein_coding	Alkbh6	exon	ENSMUSG00000042831	ProperStrand	5	chr11	6428105	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-8.1751
chr15	34370545	34370603	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	chr13	21351672	21351710	tRNA	tRNA71-AlaAGC	.	140741	ProperStrand	13	1	-6.5354
chr13	76341035	76341055	protein_coding	Fam81b	intron	ENSMUSG00000078966	NonProperStrand	220	chr2	144087327	144087427	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-4.0314
chr5	109124122	109132306	protein_coding	Fgfrl1	exon	ENSMUSG00000008090	ProperStrand	111	chr19	8963020	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-2.5225
chr5	124010963	124011026	protein_coding	Vps33a	intron	ENSMUSG00000029434	ProperStrand	16	chr15	34370650	34370676	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	3	-14.2603
chr15	99533569	99533593	protein_coding	Smarcd1	exon	ENSMUSG00000023018	ProperStrand	43	chr15	5068436	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-6.7268
chr17	64632841	64636385	protein_coding	Pja2	exon	ENSMUSG00000024083	ProperStrand	27	chr16	23110829	23110989	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-3.7531
chr4	124132209	124132225	lincRNA	1700057H15Rik	intron	ENSMUSG00000084757	ProperStrand	40	chr11	6428088	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.9420
chr18	35714262	35714291	lincRNA	Snhg4	intron	ENSMUSG00000090430	ProperStrand	270	chr15	34370545	34370664	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-1.1040
chr4	118805706	118805788	protein_coding	Slc2a1	exon	ENSMUSG00000028645	ProperStrand	361	chr11	77996560	77996619	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-2.7160
chr11	98242332	98242348	protein_coding	Stard3	utr3	ENSMUSG00000018167	NonProperStrand	1	chr19	8963027	8963083	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-inf
chr2	27616912	27616930	protein_coding	Rxra	utr3	ENSMUSG00000015846	ProperStrand	10	chr15	71688874	71688893	protein_coding	Col22a1	intron	ENSMUSG00000079022	ProperStrand	17	1	-19.5107
chr6	56653386	56654649	protein_coding	Lsm5	exon	ENSMUSG00000091625	ProperStrand	4	chr1	89673607	89673697	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	3	-inf
chr2	26493365	26493488	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr11	77995179	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	8	-0.7444
chr11	75304235	75305310	protein_coding	Prpf8	exon	ENSMUSG00000020850	ProperStrand	255	chr1	162965536	162965596	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-3.1582
chr5	21189278	21207033	protein_coding	Napepld	utr5	ENSMUSG00000044968	NonProperStrand	4	chr11	69481384	69481474	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-8.6916
mmu-miR-6240	2	23	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr4	128285074	128285091	protein_coding	Zscan20	intron	ENSMUSG00000061894	ProperStrand	6	1	-10.6285
chr11	88705609	88705700	protein_coding	Akap1	exon	ENSMUSG00000018428	ProperStrand	45	chr10	80641498	80641543	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-6.6685
chr2	179916449	179917121	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr12	12944235	12944251	protein_coding	Mycn	exon	ENSMUSG00000037169	NonProperStrand	109	2	-13.5138
chr1	91788693	91788784	protein_coding	Agap1	utr3	ENSMUSG00000055013	ProperStrand	229	chr11	106362304	106362335	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-3.2968
chr10	122002941	122003031	LINE	L1Md_F2	L1	chr10L1Md_F2122002095	ProperStrand	17	chrX	83750713	83750793	LINE	L1Md_F2	L1	chrXL1Md_F283749750	ProperStrand	1	1	-inf
chr9	78326808	78328221	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr13	51743566	51743662	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	8	-10.2428
chr15	8108715	8108804	protein_coding	Nup155	utr3	ENSMUSG00000022142	ProperStrand	91	chr9	15118334	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	3	-7.0589
chr7	13516148	13516198	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr15	5068427	5068480	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	3	-5.0857
chr8	40681587	40681603	protein_coding	Msr1	intron	ENSMUSG00000025044	ProperStrand	138	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-7.2655
chr9	26814397	26814468	protein_coding	Vps26b	utr3	ENSMUSG00000031988	ProperStrand	9	chr18	35716830	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-5.7446
chr4	62793502	62793602	protein_coding	Zfp618	exon	ENSMUSG00000028358	ProperStrand	8	chr2	145077957	145209256	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-11.8522
chr9	29296336	29296355	protein_coding	Ntm	intron	ENSMUSG00000059974	NonProperStrand	27	chr18	73693168	73693190	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-7.1081
chr9	78327273	78327439	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chrX	48743050	48743066	protein_coding	Hs6st2	exon	ENSMUSG00000062184	ProperStrand	7	1	-10.7325
chr11	4991976	4993875	protein_coding	Ewsr1	exon	ENSMUSG00000009079	ProperStrand	248	chr11	63885336	63887052	protein_coding	Cox10	exon	ENSMUSG00000042148	NonProperStrand	187	1	-8.1939
chr11	3246338	3246371	protein_coding	Limk2	exon	ENSMUSG00000020451	ProperStrand	100	chr10	23506278	23506305	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-5.9388
chr4	114322398	114322416	SINE	MIRb	MIR	chr4MIRb114322316	NonProperStrand	3	chr11	72216645	72217454	protein_coding	Smtnl2	exon	ENSMUSG00000045667	ProperStrand	30	3	-inf
chr11	59255876	59255892	protein_coding	Snap47	intron	ENSMUSG00000009894	NonProperStrand	2	chr6	115758048	115758119	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-12.8899
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr8	80092242	80095908	protein_coding	Prmt10	exon	ENSMUSG00000037134	ProperStrand	14	1	-11.6747
chr18	35714186	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	chr17	24856620	24856755	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	12	-2.2006
chr3	82707847	82707863	antisense	4930564K09Rik	.	ENSMUSG00000086273	ProperStrand	48	chr18	35714143	35714200	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-3.8569
chr16	89994376	89994393	protein_coding	Tiam1	intron	ENSMUSG00000002489	ProperStrand	80	chr11	69481332	69481432	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-2.6897
chr9	79915104	79915120	protein_coding	Senp6	utr5	ENSMUSG00000034252	ProperStrand	110	chr11	55296276	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-4.9966
chrX	71518314	71518348	protein_coding	Rpl10	exon	ENSMUSG00000008682	ProperStrand	71	chr1	88252839	88252884	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-6.3072
chr17	34165929	34166460	protein_coding	Slc39a7	exon	ENSMUSG00000024327	ProperStrand	39	chr17	26360448	26360528	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	1	-10.8974
chr9	99423651	99425775	protein_coding	Armc8	exon	ENSMUSG00000032468	ProperStrand	15	chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	1	-11.5791
chr8	86096985	86097151	protein_coding	Tecr	exon	ENSMUSG00000031708	ProperStrand	100	chr1	162967490	162967555	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	3	-6.7237
chr19	6376061	6376089	protein_coding	Sf1	utr3	ENSMUSG00000024949	ProperStrand	251	chr10	127560637	127560847	protein_coding	Baz2a	exon	ENSMUSG00000040054	ProperStrand	274	1	-7.4117
chr5	115939532	115939613	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr19	8800355	8800445	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	10	-5.7847
chr2	90235290	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr13	3860617	3860634	SINE	RSINE1	B4	chr13RSINE13860554	NonProperStrand	12	1	-7.6663
chr10	21072356	21074474	protein_coding	Hbs1l	exon	ENSMUSG00000019977	ProperStrand	27	chr7	29136526	29136606	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.7994
chr17	13184996	13185014	protein_coding	Wtap	utr5	ENSMUSG00000060475	ProperStrand	119	chr9	15119718	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.5249
chr6	122690419	122690436	protein_coding	Slc2a3	exon	ENSMUSG00000003153	ProperStrand	682	chr1	59539683	59539700	protein_coding	Fzd7	utr5	ENSMUSG00000041075	ProperStrand	373	1	-4.8549
chr15	4962082	4962098	protein_coding	C7	utr3	ENSMUSG00000079105	ProperStrand	63	chr4	131865866	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.6928
chr7	88286918	88298350	protein_coding	Slc28a1	exon	ENSMUSG00000025726	ProperStrand	8	chr2	158184092	158184182	snoRNA	ENSMUSG00000064995_SNORA71	.	ENSMUSG00000064995	ProperStrand	430	2	-18.8163
chrX	132673816	132673833	protein_coding	Bex4	intron	ENSMUSG00000047844	NonProperStrand	70	chr7	51505228	51505308	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	2	-12.5334
chr18	73693117	73693139	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr9	64024503	64024567	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	2	-2.3055
chr17	67712818	67712835	LTR	ORR1E	MaLR	chr17ORR1E67712788	ProperStrand	39	chr1	88253564	88253630	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	1	-8.2194
chr11	33460895	33460985	protein_coding	Gabrp	intron	ENSMUSG00000020159	NonProperStrand	11	chr4	131908362	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	8	-19.4237
chr13	113342177	113342193	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	chr17	24665422	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	3	-3.3427
chr9	56460602	56460648	lincRNA	Gm16960	exon	ENSMUSG00000086574	ProperStrand	4	chr10	23505152	23505245	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-inf
chr1	72871371	72871404	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	chr3	144098493	144098509	protein_coding	Hs2st1	exon	ENSMUSG00000040151	ProperStrand	18	1	-11.9256
chr16	32618816	32619139	protein_coding	Tfrc	exon	ENSMUSG00000022797	ProperStrand	71	chr18	33954845	33954945	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-3.1984
chr8	88250083	88264223	protein_coding	Itfg1	exon	ENSMUSG00000031703	ProperStrand	38	chr16	23111389	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-5.4368
chr10	6450631	6450649	protein_coding	Plekhg1	intron	ENSMUSG00000040624	NonProperStrand	75	chr9	15119647	15119726	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.2505
chr12	112830962	112830978	protein_coding	Mark3	exon	ENSMUSG00000007411	NonProperStrand	22	chr6	114258054	114258070	protein_coding	Slc6a1	exon	ENSMUSG00000030310	NonProperStrand	147	1	-13.5480
chr8	98361562	98364325	protein_coding	Slc38a7	exon	ENSMUSG00000036534	ProperStrand	25	chr2	32818815	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-7.2088
chr13	97433035	97433083	protein_coding	Hmgcr	exon	ENSMUSG00000021670	ProperStrand	56	chr5	115939520	115939612	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	7	-19.2950
chr2	158182156	158182179	lincRNA	9430008C03Rik	intron	ENSMUSG00000085385	ProperStrand	1039	chr5	146051503	146051573	protein_coding	Zfp498	exon	ENSMUSG00000070420	ProperStrand	10	1	-11.2696
chr1	90102111	90102127	protein_coding	Dnajb3	exon	ENSMUSG00000081984	ProperStrand	1	chr11	62416601	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-inf
chr2	90235322	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	122691914	122691930	protein_coding	Hvcn1	utr3	ENSMUSG00000064267	ProperStrand	182	1	-2.4448
chr2	179322380	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr10	41644311	41644329	protein_coding	Armc2	exon	ENSMUSG00000071324	ProperStrand	281	1	-8.1236
chr1	93342189	93345290	protein_coding	Per2	exon	ENSMUSG00000055866	ProperStrand	114	chr1	162965531	162965588	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.1613
chr6	31469606	31469660	protein_coding	Podxl	utr3	ENSMUSG00000025608	NonProperStrand	4	chr1	162967139	162967174	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	NonProperStrand	1	1	-inf
chr8	123652036	123652052	pseudogene	Foxl1	.	ENSMUSG00000043867	ProperStrand	17	chr10	23505258	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.3129
chr4	63211297	63211314	protein_coding	Atp6v1g1	utr3	ENSMUSG00000039105	NonProperStrand	24	chr5	121655024	121655114	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.5126
chr8	4267337	4267649	protein_coding	Timm44	exon	ENSMUSG00000002949	ProperStrand	63	chrX	71589885	71589904	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	1	-10.0507
chr8	26904182	26912407	protein_coding	Lsm1	exon	ENSMUSG00000037296	ProperStrand	2	chr11	97642991	97643071	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-9.6446
chr7	27466699	27466715	protein_coding	Cyp2b23	exon	ENSMUSG00000040650	ProperStrand	39	chr17	35089180	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	3	-14.5203
chr2	53003875	53003891	protein_coding	Prpf40a	exon	ENSMUSG00000061136	ProperStrand	129	chr2	22444933	22444955	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-6.2590
chr1	133727368	133727416	protein_coding	Slc41a1	exon	ENSMUSG00000013275	ProperStrand	19	chr9	64022857	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-10.3506
chr1	132953475	132953530	protein_coding	Mapkapk2	exon	ENSMUSG00000016528	ProperStrand	9	chrX	138159145	138159161	protein_coding	Irs4	exon	ENSMUSG00000054667	NonProperStrand	98	1	-16.1849
chr3	157688916	157688988	protein_coding-noncoding	Srsf11	utr3	ENSMUSG00000055436	ProperStrand	3	chr10	23505559	23505602	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-13.9073
chr5	111148564	111148636	protein_coding	Ep400	exon	ENSMUSG00000029505	ProperStrand	176	chr17	24665446	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-2.9359
chr7	146086386	146086476	protein_coding	Bnip3	intron	ENSMUSG00000078566	ProperStrand	20	chr5	130300473	130300553	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.5361
chr14	73725530	73725551	protein_coding	Rb1	utr5	ENSMUSG00000022105	ProperStrand	67	chr11	98878341	98878452	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	2	-9.8583
chr2	156550057	156550142	protein_coding	Dlgap4	intron	ENSMUSG00000061689	ProperStrand	80	chr3	123210853	123210915	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-4.6579
chr2	90235287	90235347	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	30441216	30441233	protein_coding	Fam59b	exon	ENSMUSG00000044576	NonProperStrand	20	1	-6.6233
chr1	36867247	36884255	protein_coding	Tmem131	exon	ENSMUSG00000026116	ProperStrand	129	chr16	23110907	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	7	-1.8200
chr15	36723350	36723386	protein_coding	Ywhaz	utr5	ENSMUSG00000022285	ProperStrand	73	chr4	46508088	46508157	snoRNA	ENSMUSG00000064410_SNORA36	.	ENSMUSG00000064410	ProperStrand	133	1	-11.3208
chr12	13681064	13681082	LTR	RLTR11A	ERVK	chr12RLTR11A13680821	ProperStrand	1	chr11	62416599	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-inf
chr2	24825186	24827046	protein_coding	Wdr85	exon	ENSMUSG00000026975	ProperStrand	323	chr9	78328360	78328432	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-3.1300
chr16	56035948	56036001	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	chr5	92485086	92485165	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	1	-4.4540
chr9	57871825	57871843	protein_coding	Cyp11a1	intron	ENSMUSG00000032323	ProperStrand	1	chr9	50816824	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	1	-inf
chr5	120648253	120648342	protein_coding	Rbm19	intron	ENSMUSG00000029594	ProperStrand	40	chr15	79566020	79566039	protein_coding	Sun2	intron	ENSMUSG00000042524	NonProperStrand	3	1	-21.1665
chr8	11625539	11625606	protein_coding	Ankrd10	intron	ENSMUSG00000031508	ProperStrand	32	chr14	76372288	76372346	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	1	-10.2580
chr13	9833554	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr10	126467643	126467686	protein_coding	Tsfm	exon	ENSMUSG00000040521	ProperStrand	7	2	-14.9821
chr2	119422202	119422243	lincRNA	1700020I14Rik	exon	ENSMUSG00000085438	ProperStrand	15	chr2	14994820	14996590	protein_coding	Arl5b	exon	ENSMUSG00000017418	ProperStrand	55	1	-16.2819
chr15	79254383	79268746	protein_coding	Csnk1e	exon	ENSMUSG00000022433	ProperStrand	59	chr18	33954821	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	5	-15.0076
chr7	108971290	108971306	protein_coding	Inppl1	utr3	ENSMUSG00000032737	ProperStrand	272	chr12	17553060	17553089	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-2.3196
chr11	4982390	4983363	protein_coding	Ewsr1	exon	ENSMUSG00000009079	ProperStrand	248	chr1	155287331	155287355	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	1	-6.1617
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr5	54389949	54389965	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	1	-6.3320
chr3	135628328	135628418	LINE	Lx3_Mus	L1	chr3Lx3_Mus135628314	ProperStrand	1	chr2	108586644	108586734	LTR	RMER19B	ERVK	chr2RMER19B108586305	ProperStrand	1	1	-inf
chr5	30074923	30077575	protein_coding	Dnajb6	exon	ENSMUSG00000029131	ProperStrand	81	chr7	29136525	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	5	-9.5070
chr1	53409486	53409502	protein_coding	Asnsd1	utr5	ENSMUSG00000026095	NonProperStrand	105	chr1	58116010	58116028	protein_coding	Aox1	exon	ENSMUSG00000063558	ProperStrand	20	1	-14.4179
chr17	4082634	4082720	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr15	79913288	79913330	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-0.9248
chr13	49557814	49557831	protein_coding	Ippk	utr3	ENSMUSG00000021385	ProperStrand	5	chr2	158451027	158451043	protein_coding	Actr5	exon	ENSMUSG00000037761	NonProperStrand	94	1	-17.2772
chr6	51438919	51438937	LTR	RLTR20D	ERVK	chr6RLTR20D51438809	ProperStrand	1	chr5	23358062	23358090	snoRNA	ENSMUSG00000093321_Snord93	.	ENSMUSG00000093321	ProperStrand	218	1	-inf
chr16	13332970	13332987	protein_coding	Mkl2	utr3	ENSMUSG00000009569	ProperStrand	55	chr4	131865855	131865928	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.9045
chr5	145638470	145638560	protein_coding	Smurf1	utr3	ENSMUSG00000038780	ProperStrand	45	chr7	116664795	116664875	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.0553
chr8	32837188	32837207	LINE	Lx3C	L1	chr8Lx3C32836913	ProperStrand	3	chr12	106269339	106269429	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	2	-17.3457
chr11	121188909	121188934	protein_coding	Wdr45l	utr3	ENSMUSG00000025173	ProperStrand	8	chr16	23111383	23111415	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-8.1684
chr2	57090809	57090827	protein_coding	Gpd2	utr5	ENSMUSG00000026827	ProperStrand	93	chr3	90197173	90197671	protein_coding	Ints3	exon	ENSMUSG00000027933	ProperStrand	87	1	-11.6855
chr17	27156840	27156902	protein_coding	Bak1	utr3	ENSMUSG00000057789	ProperStrand	17	chr4	131908800	131908890	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-14.8517
chr5	122608360	122608377	protein_coding	Ppp1cc	utr5	ENSMUSG00000004455	ProperStrand	46	chr10	79777527	79777545	protein_coding	Apc2	exon	ENSMUSG00000020135	NonProperStrand	5	1	-18.6318
chr2	129998666	129998709	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr9	15119287	15119370	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	4	-3.8609
chr7	51828028	51828044	protein_coding	Napsa	exon	ENSMUSG00000002204	ProperStrand	88	chr9	15119650	15119708	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.9893
chr7	132605609	132605641	protein_coding	Jmjd5	utr3	ENSMUSG00000030752	ProperStrand	4	chr5	130300451	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-13.1528
chr2	147009105	147009122	protein_coding	Nkx2-2	utr3	ENSMUSG00000027434	NonProperStrand	84	chr17	39985207	39985295	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	2	-8.6557
chr6	131330289	131330334	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	ProperStrand	408	chr5	130295425	130295515	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-1.7994
chr12	111877064	111877175	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr8	32260335	32260365	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-0.7470
chr13	68759738	68764669	protein_coding	Adcy2	exon	ENSMUSG00000021536	ProperStrand	237	chr2	26493394	26493484	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-1.4254
chr19	6919439	6919529	protein_coding	Ccdc88b	utr3	ENSMUSG00000047810	ProperStrand	13	chr19	8800385	8800466	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	11	-inf
chr1	93065543	93065559	protein_coding	Rbm44	exon	ENSMUSG00000070732	ProperStrand	4	chr4	131908232	131908355	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-6.5415
chr11	100581379	100581396	protein_coding	Rab5c	utr5	ENSMUSG00000019173	ProperStrand	76	chr17	83901684	83901749	protein_coding	Cox7a2l	utr3	ENSMUSG00000024248	ProperStrand	8	1	-16.8227
chr3	32336232	32336301	protein_coding	Pik3ca	intron	ENSMUSG00000027665	ProperStrand	23	chr14	33005038	33005091	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	3	-13.6390
chr1	42894540	42894630	SINE	B4	B4	chr1B442894405	ProperStrand	1	chr8	119851978	119852068	protein_coding	4933407C03Rik	intron	ENSMUSG00000034390	NonProperStrand	32	1	-inf
chr15	102785483	102785501	protein_coding	Hoxc11	exon	ENSMUSG00000001656	ProperStrand	3	chrX	34589398	34589415	protein_coding	Sowahd	exon	ENSMUSG00000044400	ProperStrand	26	1	-20.0435
chr11	68936358	68936374	protein_coding	Hes7	exon	ENSMUSG00000023781	NonProperStrand	66	chr10	23506322	23506348	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-6.7582
chr15	73436268	73436310	protein_coding	Slc45a4	utr5	ENSMUSG00000079020	ProperStrand	127	chr1	162968484	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	2	-7.6607
chr5	108333572	108333643	snoRNA	ENSMUSG00000064453_Snord21	.	ENSMUSG00000064453	ProperStrand	201	chr18	35714247	35714292	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-1.4278
chr7	30667852	30667942	protein_coding	Zfp420	intron	ENSMUSG00000058402	NonProperStrand	8	chr1	58336903	58336993	protein_coding	Aox3l1	intron	ENSMUSG00000079554	ProperStrand	3	1	-21.9894
chr19	7289666	7289780	protein_coding	Cox8a	utr3	ENSMUSG00000035885	ProperStrand	32	chr2	26493476	26493496	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-4.9420
chr9	108994314	108994343	protein_coding	Ccdc51	exon	ENSMUSG00000025645	ProperStrand	5	chr16	23111389	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-5.8178
chr5	143668336	143668357	protein_coding	Actb	utr5	ENSMUSG00000029580	ProperStrand	446	chr14	33005094	33005138	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-0.7872
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr7	118219575	118219634	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-1.6489
chr17	6232006	6232022	protein_coding	Tulp4	exon	ENSMUSG00000034377	NonProperStrand	265	chr2	173545721	173545740	protein_coding	1700010B08Rik	exon	ENSMUSG00000057047	NonProperStrand	2	1	-17.9922
chr2	138188027	138188045	protein_coding	Btbd3	intron	ENSMUSG00000062098	NonProperStrand	121	chr2	145076805	145209255	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-6.3324
chr12	86474758	86474828	protein_coding	Dlst	utr3	ENSMUSG00000004789	ProperStrand	52	chrX	71517838	71517928	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-6.8294
chr4	43249893	43249993	protein_coding	Unc13b	exon	ENSMUSG00000028456	ProperStrand	29	chr11	97642952	97642971	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.7822
chr2	154698308	154698350	protein_coding	Eif2s2	utr3	ENSMUSG00000074656	ProperStrand	96	chr5	130300490	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-3.2039
chr3	116334397	116334413	protein_coding	Hiat1	utr3	ENSMUSG00000089911	ProperStrand	20	chr9	120039533	120039604	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-5.4196
chr7	125332799	125333335	protein_coding	Smg1	exon	ENSMUSG00000030655	ProperStrand	70	chr4	132394418	132394460	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	4	-inf
chr2	83642207	83642223	protein_coding	Itgav	exon	ENSMUSG00000027087	ProperStrand	59	chr8	73033214	73033239	protein_coding	2810422J05Rik	exon	ENSMUSG00000055553	ProperStrand	171	1	-11.2456
chr11	97889684	97889737	protein_coding	Rpl19	exon	ENSMUSG00000017404	ProperStrand	120	chr4	151348417	151351069	protein_coding	Dnajc11	exon	ENSMUSG00000039768	NonProperStrand	16	1	-14.6127
chr7	52975737	52975808	protein_coding	Rpl18	exon	ENSMUSG00000059070	ProperStrand	116	chr3	95980391	95980410	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	2	-9.0832
chr4	151699972	151699998	protein_coding	Rpl22	utr5	ENSMUSG00000028936	ProperStrand	112	chr6	119898559	119898608	protein_coding	Wnk1	exon	ENSMUSG00000045962	ProperStrand	221	1	-9.4465
chr7	52381973	52382009	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	chr6	124665282	124665382	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	1	-1.0482
chrX	98734409	98758900	protein_coding	Taf1	exon	ENSMUSG00000031314	ProperStrand	61	chr16	23110911	23110991	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-0.7762
chr16	72800514	72800532	protein_coding	Robo1	intron	ENSMUSG00000022883	NonProperStrand	188	chr8	73033225	73033248	protein_coding	2810422J05Rik	exon	ENSMUSG00000055553	ProperStrand	171	1	-8.9238
chr11	42440243	42440259	protein_coding	Gabrb2	exon	ENSMUSG00000007653	ProperStrand	248	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-1.2563
chr4	131908363	131908442	lincRNA	Gm17300	exon	ENSMUSG00000091021	ProperStrand	109	chr10	80578075	80578094	protein_coding	Map2k2	intron	ENSMUSG00000035027	ProperStrand	26	1	-13.8033
chr17	31750099	31750160	protein_coding	Cbs	utr3	ENSMUSG00000024039	ProperStrand	12	chr7	109149271	109149287	protein_coding	Numa1	exon	ENSMUSG00000066306	NonProperStrand	171	1	-14.4918
chr8	72817928	72818596	protein_coding	Ddx49	exon	ENSMUSG00000057788	ProperStrand	68	chr4	131908236	131908296	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.2431
chr9	65029396	65029476	protein_coding	Igdcc3	exon	ENSMUSG00000032394	ProperStrand	17	chr13	51743573	51743663	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-9.4038
chr19	4774680	4774723	SINE	RSINE1	B4	chr19RSINE14774599	NonProperStrand	2	chr3	123210884	123210972	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-inf
chr5	54275529	54275617	protein_coding	Tbc1d19	intron	ENSMUSG00000039178	ProperStrand	4	chr5	130300433	130300501	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-7.9077
chr19	6335077	6335455	protein_coding	Men1	exon	ENSMUSG00000024947	NonProperStrand	4	chr19	8799855	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-10.5562
chrX	56289297	56289387	LINE	L1M3	L1	chrXL1M356289281	ProperStrand	1	chrX	56288918	56288998	LTR	MLT1A1	MaLR	chrXMLT1A156288940	NonProperStrand	1	1	-inf
chr13	21272336	21272427	protein_coding	Trim27	utr5	ENSMUSG00000021326	ProperStrand	28	chr8	129468849	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-5.8992
chr1	9910538	9910555	protein_coding	6030422M02Rik	exon	ENSMUSG00000046101	ProperStrand	3	chr7	116664871	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-8.6415
chr2	130101871	130102222	protein_coding	Nop56	exon	ENSMUSG00000027405	ProperStrand	125	chr13	101549446	101549526	protein_coding	Ccnb1	utr3	ENSMUSG00000041431	ProperStrand	39	1	-12.7074
chr1	155287318	155287355	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	chr11	101466251	101466351	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	1	-4.6130
chr1	162967490	162967549	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	chr16	32243797	32243853	snoRNA	ENSMUSG00000080440_SNORA79	.	ENSMUSG00000080440	ProperStrand	140	1	-2.0047
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr18	75161108	75161130	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	1	-4.5757
chr7	52378398	52378469	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	chr7	67125804	67125831	snoRNA	ENSMUSG00000089375_Snord107	.	ENSMUSG00000089375	ProperStrand	451	1	-4.5434
chr1	155067519	155067589	protein_coding	Lamc1	utr3	ENSMUSG00000026478	NonProperStrand	12	chr8	98269976	98270066	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	NonProperStrand	11	3	-22.6178
chrX	138159145	138159161	protein_coding	Irs4	exon	ENSMUSG00000054667	NonProperStrand	98	chr18	35716830	35716865	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.4109
chr15	4104401	4104491	protein_coding	Oxct1	utr3	ENSMUSG00000022186	ProperStrand	48	chr10	110918567	110918591	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-3.8629
chr16	38445857	38445937	protein_coding	Adprh	exon	ENSMUSG00000002844	ProperStrand	30	chr10	80641727	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	1	-8.9406
chr13	64863287	64863304	protein_coding	Cntnap3	exon	ENSMUSG00000033063	ProperStrand	87	chr18	33954816	33954872	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-2.8358
chr2	139865890	139865990	protein_coding	Tasp1	intron	ENSMUSG00000039033	ProperStrand	6	chr11	97642952	97642972	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-6.9580
chr7	37555014	37555030	protein_coding	Tshz3	exon	ENSMUSG00000021217	ProperStrand	16	chr10	39978314	39978374	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	3	-18.1262
chr19	11688747	11688765	LTR	ERVL-B4-int	ERVL	chr19ERVL-B4-int11688693	ProperStrand	3	chr10	50441624	50441641	protein_coding	Ascc3	exon	ENSMUSG00000038774	ProperStrand	10	1	-inf
chr13	30338190	30338207	protein_coding	Mboat1	utr3	ENSMUSG00000038732	NonProperStrand	148	chr10	23505204	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-1.2963
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr14	72301755	72301771	SINE	B4	B4	chr14B472301692	NonProperStrand	99	1	-12.1465
chr17	56560768	56561623	protein_coding	Ptprs	exon	ENSMUSG00000013236	ProperStrand	152	chr17	24719006	24719038	protein_coding	Pkd1	intron	ENSMUSG00000032855	ProperStrand	61	4	-19.4842
chr1	180253810	180255429	protein_coding-noncoding	Hnrnpu	utr3	ENSMUSG00000039630	ProperStrand	12	chr4	131908814	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-6.7788
chr11	105045530	105045604	protein_coding	Tlk2	exon	ENSMUSG00000020694	ProperStrand	19	chr10	90581221	90581279	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-7.0834
chr16	37885630	37885683	protein_coding	Lrrc58	utr3	ENSMUSG00000034158	ProperStrand	23	chr10	110918592	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-5.2814
chr7	17501115	17501173	protein_coding	Calm3	utr3	ENSMUSG00000019370	ProperStrand	28	chr4	131908351	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.6458
chr3	94838542	94838576	protein_coding	Psmd4	exon	ENSMUSG00000005625	ProperStrand	20	chr7	116663700	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-7.5988
chr5	100390080	100390157	protein_coding	Hnrnpd	utr3	ENSMUSG00000000568	ProperStrand	33	chr16	23110549	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.5297
chr17	35299507	35299631	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	chr4	122970425	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	2	-0.7195
chr8	13369561	13370526	protein_coding	Tfdp1	exon	ENSMUSG00000038482	ProperStrand	19	chr3	135125950	135125988	protein_coding	Ube2d3	exon	ENSMUSG00000078578	ProperStrand	34	1	-16.7556
chr19	21867422	21904373	protein_coding	Tmem2	exon	ENSMUSG00000024754	ProperStrand	133	chr5	74489597	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	3	-6.2758
chrX	84483702	84483742	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr9	64023229	64023329	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	5	-14.8067
chr12	25742780	25742869	protein_coding	Kidins220	utr3	ENSMUSG00000036333	NonProperStrand	2	chr8	107960715	107960805	protein_coding	Lrrc36	intron	ENSMUSG00000054320	NonProperStrand	1	1	-inf
chr6	124663121	124664063	protein_coding	Phb2	exon	ENSMUSG00000004264	ProperStrand	43	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.9253
chr4	131908599	131908629	protein_coding	Rcc1	utr5	ENSMUSG00000028896	ProperStrand	55	chr4	131908835	131908899	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.3443
chr14	20598094	20630486	protein_coding	Nid2	utr3	ENSMUSG00000021806	ProperStrand	372	chr7	116663635	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-1.0912
chr7	129313011	129313111	protein_coding	Plk1	utr3	ENSMUSG00000030867	ProperStrand	146	chr19	8799042	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-4.1189
chr14	21396477	21396736	protein_coding	Usp54	exon	ENSMUSG00000034235	ProperStrand	20	chr2	26768392	26768433	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-7.7939
chr9	67786797	67786840	protein_coding	Vps13c	exon	ENSMUSG00000035284	ProperStrand	69	chr1	162967539	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-3.2194
chr2	90235286	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr12	109460710	109460726	protein_coding	Ccdc85c	intron	ENSMUSG00000084883	ProperStrand	157	2	-4.7070
chr14	20451772	20451789	LTR	IAPLTR3-int	ERVK	chr14IAPLTR3-int20447903	ProperStrand	44	chr1	88252836	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-7.2574
chr11	109130252	109130268	protein_coding	Rgs9	exon	ENSMUSG00000020599	ProperStrand	18	chr16	91227718	91227735	protein_coding	Olig2	utr3	ENSMUSG00000039830	NonProperStrand	78	1	-15.2238
chr15	40891282	40891299	protein_coding	Zfpm2	intron	ENSMUSG00000022306	NonProperStrand	35	chr13	98011124	98011145	protein_coding	Enc1	utr5	ENSMUSG00000041773	ProperStrand	24	1	-16.2740
chr13	20852873	20852889	LINE	Lx5	L1	chr13Lx520849861	NonProperStrand	1	chr2	63936035	63936053	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-inf
chr7	52138150	52138167	protein_coding	Med25	exon	ENSMUSG00000002968	NonProperStrand	1	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-inf
chr16	91630353	91630376	protein_coding	Gart	exon	ENSMUSG00000022962	ProperStrand	200	chr4	134483064	134483174	protein_coding	D4Wsu53e	utr3	ENSMUSG00000037266	ProperStrand	15	1	-13.7205
chr11	62418030	62418092	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	chr11	51551343	51551381	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	3	-2.6984
mmu-miR-1949	3	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr17	28465535	28465562	protein_coding	Rpl10a	utr5	ENSMUSG00000037805	ProperStrand	121	1	-6.7540
chr2	29886541	29886598	protein_coding	Spna2	exon	ENSMUSG00000057738	ProperStrand	222	chrX	34622930	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	4	-4.8923
chr17	27698415	27699872	protein_coding	Hmga1	utr3	ENSMUSG00000046711	ProperStrand	180	chr16	23111689	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	6	-5.3319
chr9	96219605	96219630	protein_coding	Tfdp2	utr3	ENSMUSG00000032411	ProperStrand	95	chr7	13594771	13594787	protein_coding	Zbtb45	intron	ENSMUSG00000049600	ProperStrand	16	1	-15.0832
chr17	36024938	36025133	protein_coding	Dhx16	exon	ENSMUSG00000024422	ProperStrand	28	chr3	123210854	123210890	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.3984
chr5	121655016	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	chr11	106362559	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	6	-1.7432
chr5	30387223	30387313	protein_coding	Tyms	utr3	ENSMUSG00000025747	NonProperStrand	6	chr7	110699280	110699370	protein_coding	Olfr613	utr5	ENSMUSG00000078624	NonProperStrand	13	1	-19.0465
chr6	48362409	48363077	protein_coding	Krba1	exon	ENSMUSG00000042810	ProperStrand	7	chr13	100196750	100196788	protein_coding	Mtap1b	intron	ENSMUSG00000052727	ProperStrand	76	1	-17.3540
chr15	99433436	99433452	protein_coding	Aqp6	exon	ENSMUSG00000043144	NonProperStrand	45	chr18	35714196	35714290	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-3.9783
chr2	93874204	93884064	protein_coding	Hsd17b12	exon	ENSMUSG00000027195	ProperStrand	28	chr16	23110553	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	9	-20.8382
chr17	13897771	13940947	protein_coding	Mllt4	exon	ENSMUSG00000068036	ProperStrand	156	chr9	120039604	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.7016
chr11	60231099	60231117	protein_coding	Atpaf2	intron	ENSMUSG00000042709	ProperStrand	12	chr1	88247816	88247875	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	2	-13.3730
chr19	45274766	45274789	SINE	B3A	B2	chr19B3A45274728	ProperStrand	2	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-inf
chrX	20213014	20214615	protein_coding	Rbm10	exon	ENSMUSG00000031060	ProperStrand	31	chr18	33954870	33954950	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	3	-11.3649
chr6	86965607	86969360	protein_coding	Nfu1	exon	ENSMUSG00000029993	ProperStrand	12	chr16	23111747	23111827	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.8390
chr9	73138167	73138183	LTR	RLTR18	ERVK	chr9RLTR1873137987	NonProperStrand	1	chr1	174210708	174210725	protein_coding	Igsf8	intron	ENSMUSG00000038034	ProperStrand	25	1	-inf
chr9	64024506	64024566	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	chr13	49779667	49779746	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	2	-4.1682
chr15	98701503	98701560	protein_coding	Mll2	utr5	ENSMUSG00000048154	ProperStrand	170	chr9	15119719	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.0359
chrX	147436793	147438126	protein_coding	Gnl3l	exon	ENSMUSG00000025266	ProperStrand	52	chr11	69481335	69481415	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.4617
chr11	62418014	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	chr1	162966813	162966838	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	3	-0.9538
chr14	30851615	30851631	protein_coding	Chdh	utr3	ENSMUSG00000015970	ProperStrand	50	chr16	23111385	23111418	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.5189
chr10	83017509	83017548	protein_coding	A230046K03Rik	exon	ENSMUSG00000034560	ProperStrand	41	chr16	23111789	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-4.4771
chrX	152009278	152009294	protein_coding	Ptchd1	exon	ENSMUSG00000041552	NonProperStrand	294	chr9	109020494	109020539	protein_coding	Plxnb1	utr3	ENSMUSG00000053646	ProperStrand	25	1	-11.8994
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr1	120779380	120779466	protein_coding	Gli2	intron	ENSMUSG00000048402	ProperStrand	148	1	-6.9179
chr9	21934462	21934478	protein_coding	Acp5	exon	ENSMUSG00000001348	ProperStrand	66	chr11	62416951	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-5.8557
chr15	89118956	89119056	protein_coding	Sbf1	utr3	ENSMUSG00000036529	ProperStrand	85	chr7	117166781	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-4.1511
chrX	58225380	58225396	pseudogene	Rpl7l1-ps1	.	ENSMUSG00000081323	ProperStrand	46	chr16	23110939	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.2288
chr2	22444850	22444950	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	chrX	71517910	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-1.5155
chr6	125071782	125071872	snoRNA	ENSMUSG00000088208_SCARNA11	.	ENSMUSG00000088208	ProperStrand	113	chr17	24856663	24856743	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-5.1873
chr2	90235312	90235336	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	117827612	117827646	protein_coding	Socs3	utr3	ENSMUSG00000053113	ProperStrand	137	1	-2.9369
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr15	100299084	100299100	lincRNA	5330439K02Rik	exon	ENSMUSG00000092050	NonProperStrand	36	1	-9.7439
chr4	118108973	118109179	protein_coding	Cdc20	exon	ENSMUSG00000006398	ProperStrand	43	chr1	162966000	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-4.2288
chr7	52409137	52409196	protein_coding	Aldh16a1	intron	ENSMUSG00000007833	ProperStrand	27	chr11	69483136	69483212	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-6.5936
chr17	32453268	32453285	protein_coding	Akap8	exon	ENSMUSG00000024045	ProperStrand	339	chr2	3143183	3143252	protein_coding	Fam171a1	exon	ENSMUSG00000050530	ProperStrand	12	3	-inf
chr1	93263063	93263079	protein_coding	Fam132b	exon	ENSMUSG00000047443	NonProperStrand	98	chr10	39978353	39978443	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-4.5118
chr4	86226635	86226686	protein_coding	Haus6	utr3	ENSMUSG00000038047	ProperStrand	21	chr19	8800085	8800148	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	4	-19.5099
chr11	4520502	4520519	protein_coding	Gm11032	intron	ENSMUSG00000079010	ProperStrand	2	chr1	162966189	162966249	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-15.0517
chr7	27466699	27466715	protein_coding	Cyp2b23	exon	ENSMUSG00000040650	ProperStrand	39	chr7	52974624	52974938	protein_coding	Rpl18	exon	ENSMUSG00000059070	ProperStrand	116	1	-12.8572
chr17	69878351	69878431	LINE	Lx	L1	chr17Lx69877394	NonProperStrand	1	chr3	113031610	113031700	LINE	L1_Mm	L1	chr3L1_Mm113031276	NonProperStrand	1	1	-inf
chr19	6984448	6984464	protein_coding	Prdx5	utr5	ENSMUSG00000024953	ProperStrand	24	chr2	120872244	120872260	protein_coding	Tgm5	exon	ENSMUSG00000053675	NonProperStrand	163	1	-13.1631
chr2	26203131	26203147	protein_coding	Gpsm1	utr3	ENSMUSG00000026930	ProperStrand	93	chr7	116663633	116663692	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.7938
chr10	7480425	7480500	protein_coding	Katna1	intron	ENSMUSG00000019794	ProperStrand	14	chr16	23110546	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-12.4219
chr7	52382755	52382832	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	chr11	98878344	98878471	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	3	-2.3984
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr7	138459653	138459669	protein_coding	Cuzd1	exon	ENSMUSG00000040205	NonProperStrand	59	1	-5.9366
chr13	104840853	104840869	protein_coding	Nln	exon	ENSMUSG00000021710	ProperStrand	47	chr11	48616641	48616688	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	2	-15.5430
chr6	124782394	124782603	protein_coding	Cdca3	exon	ENSMUSG00000023505	ProperStrand	24	chr16	23110475	23110548	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.1305
chr9	36954908	36954925	Low_complexity	C-rich	Low_complexity	chr9C-rich36954912	NonProperStrand	1	chr15	27857740	27857756	protein_coding	Trio	intron	ENSMUSG00000022263	NonProperStrand	20	1	-inf
chr1	173189043	173189137	protein_coding	Adamts4	exon	ENSMUSG00000006403	ProperStrand	9	chr5	108334261	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-8.6398
chr9	120862114	120864317	protein_coding	Ctnnb1	exon	ENSMUSG00000006932	ProperStrand	214	chr5	111812088	111812105	protein_coding	Pitpnb	exon	ENSMUSG00000050017	ProperStrand	137	1	-9.1079
chrX	84483699	84483750	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr12	77200288	77200304	protein_coding	Syne2	exon	ENSMUSG00000063450	ProperStrand	63	1	-8.1514
chr13	73951102	73952372	protein_coding	Slc12a7	exon	ENSMUSG00000017756	ProperStrand	80	chr7	52381719	52381796	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-7.0018
chr11	64814783	64814804	protein_coding	Elac2	utr3	ENSMUSG00000020549	ProperStrand	12	chr1	95268859	95268919	protein_coding	Ppp1r7	utr3	ENSMUSG00000026275	ProperStrand	44	2	-inf
chr9	43921925	43921942	lincRNA	Gm3906	intron	ENSMUSG00000092003	NonProperStrand	41	chr17	46703129	46704875	protein_coding	Ptk7	exon	ENSMUSG00000023972	ProperStrand	101	4	-21.9837
chr3	88372113	88372169	protein_coding	Ubqln4	utr3	ENSMUSG00000008604	ProperStrand	49	chr13	53073980	53073997	protein_coding	Nfil3	intron	ENSMUSG00000056749	NonProperStrand	66	1	-13.5339
chr19	41986500	41992540	protein_coding	Pgam1	utr3	ENSMUSG00000011752	ProperStrand	124	chr19	8798740	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	6	-17.8099
chr1	24333002	24334887	protein_coding	Col19a1	exon	ENSMUSG00000026141	ProperStrand	37	chr2	146900670	146900716	protein_coding	Xrn2	exon	ENSMUSG00000027433	ProperStrand	48	1	-14.7388
chr13	6574113	6574129	protein_coding	Pitrm1	intron	ENSMUSG00000021193	NonProperStrand	8	chr19	8963021	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-6.1145
chr17	6232006	6232022	protein_coding	Tulp4	exon	ENSMUSG00000034377	NonProperStrand	265	chr8	109062969	109063038	protein_coding	Cdh3	exon	ENSMUSG00000061048	ProperStrand	62	1	-10.2697
chr6	143863278	143863299	protein_coding	Sox5	intron	ENSMUSG00000041540	NonProperStrand	49	chr4	139041251	139041951	protein_coding	Ubr4	exon	ENSMUSG00000066036	ProperStrand	304	3	-22.9086
chr2	11415489	11415544	protein_coding	Pfkfb3	intron	ENSMUSG00000026773	ProperStrand	27	chr16	23110847	23110937	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.3280
chr12	86469311	86470751	protein_coding	Dlst	exon	ENSMUSG00000004789	ProperStrand	52	chr7	148634711	148634791	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-4.2567
chr1	4887367	4887390	protein_coding	Tcea1	utr3	ENSMUSG00000033813	ProperStrand	24	chr4	131866229	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-5.4259
chr6	121423179	121423195	protein_coding	Iqsec3	utr5	ENSMUSG00000040797	NonProperStrand	139	chr10	87938133	87938149	protein_coding	Chpt1	utr3	ENSMUSG00000060002	ProperStrand	15	1	-14.4451
chr10	127030415	127030451	protein_coding	Lrp1	exon	ENSMUSG00000040249	ProperStrand	151	chr19	8963086	8963174	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-0.9237
chr1	137290869	137290907	protein_coding	Ipo9	exon	ENSMUSG00000041879	ProperStrand	53	chr11	62418015	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	5	-20.7922
chr2	157119950	157120991	protein_coding	Rpn2	exon	ENSMUSG00000027642	ProperStrand	363	chr2	26493366	26493485	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-0.8683
chr11	84236477	84256123	protein_coding	Aatf	exon	ENSMUSG00000018697	ProperStrand	10	chr9	120039567	120039620	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-6.8270
chr16	3856858	3856875	protein_coding	Zfp174	utr3	ENSMUSG00000054939	NonProperStrand	166	chr16	23111451	23111503	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-1.0988
chr6	120884198	120884298	protein_coding	Mical3	utr3	ENSMUSG00000051586	ProperStrand	104	chr15	34370545	34370617	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-2.5668
chr11	65440868	65440958	LINE	L1_Mus2	L1	chr11L1_Mus265440270	ProperStrand	1	chr11	65441016	65441106	LTR	MTC	MaLR	chr11MTC65440957	ProperStrand	1	1	-inf
chr3	85942011	85945714	protein_coding	Rps3a	exon	ENSMUSG00000028081	ProperStrand	177	chr13	109460771	109461584	protein_coding	Gm9000	exon	ENSMUSG00000059751	ProperStrand	25	15	-20.2925
chr19	5801150	5801219	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr2	167434458	167434481	protein_coding	Gm20431	utr3	ENSMUSG00000089739	ProperStrand	81	1	-6.9476
chr11	32635308	32635327	protein_coding	Fbxw11	exon	ENSMUSG00000020271	NonProperStrand	31	chr7	67123693	67123737	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	1	-10.8714
chr19	23280207	23280226	LTR	RMER17C	ERVK	chr19RMER17C23280065	NonProperStrand	1	chr11	69482352	69482386	snoRNA	ENSMUSG00000089542_snoU6-77	.	ENSMUSG00000089542	ProperStrand	138	1	-inf
chr12	109351872	109351894	protein_coding-noncoding	Setd3	utr3	ENSMUSG00000056770	ProperStrand	2	chr5	14252800	14252816	protein_coding	Sema3e	utr3	ENSMUSG00000063531	ProperStrand	125	1	-18.7773
chr7	19591413	19591429	protein_coding	Irf2bp1	exon	ENSMUSG00000044030	NonProperStrand	81	chr4	131865856	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.3246
chr11	75029989	75030006	protein_coding	Rtn4rl1	intron	ENSMUSG00000045287	ProperStrand	4	chr8	73419682	73419776	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-23.0344
chr14	119028949	119030284	protein_coding	Abcc4	exon	ENSMUSG00000032849	ProperStrand	137	chr1	162966000	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-2.1536
chr5	122030682	122030727	protein_coding	Aldh2	exon	ENSMUSG00000029455	ProperStrand	108	chr11	69731483	69731518	protein_coding	Eif5a	exon	ENSMUSG00000078812	ProperStrand	164	2	-15.9543
chr1	17702605	17702621	lincRNA	Gm16070	exon	ENSMUSG00000085125	ProperStrand	2	chr10	93103984	93104000	protein_coding	Ntn4	utr5	ENSMUSG00000020019	NonProperStrand	7	1	-inf
chr1	155067467	155067567	protein_coding	Lamc1	utr3	ENSMUSG00000026478	ProperStrand	239	chr15	85889272	85889291	protein_coding	Gramd4	utr5	ENSMUSG00000035900	ProperStrand	39	1	-11.4109
chr11	77698808	77698907	protein_coding	Pipox	intron	ENSMUSG00000017453	ProperStrand	11	chr17	24857826	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-5.4831
chr12	8223781	8223798	protein_coding	1110057K04Rik	intron	ENSMUSG00000037669	ProperStrand	25	chr9	120038467	120038530	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.6808
chr5	135858996	135859096	protein_coding	Pom121	exon	ENSMUSG00000053293	ProperStrand	127	chr4	131866238	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-2.3347
chr4	131865855	131865886	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	NonProperStrand	39	chr3	123210854	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	NonProperStrand	45	1	-14.7488
chr8	44215948	44215981	protein_coding	Triml1	exon	ENSMUSG00000031651	ProperStrand	12	chrX	143918835	143918899	snoRNA	ENSMUSG00000084421_SNORA35	.	ENSMUSG00000084421	ProperStrand	293	1	-13.4185
chr10	127428422	127428438	protein_coding	Hsd17b6	exon	ENSMUSG00000025396	NonProperStrand	68	chr3	123210890	123210972	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.8659
chr2	86138158	86138174	protein_coding	Olfr1052	exon	ENSMUSG00000047149	NonProperStrand	119	chr18	73693111	73693137	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-4.2063
chr2	63936034	63936053	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr17	24857725	24857851	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	8	-0.8322
chr6	125080009	125080109	protein_coding	Chd4	utr3	ENSMUSG00000063870	ProperStrand	303	chr11	62416970	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-2.9793
chr13	59912923	59916306	protein_coding	Zcchc6	exon	ENSMUSG00000035248	ProperStrand	23	chr4	131865856	131865946	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.4190
chr18	75161536	75161584	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	chr11	62416951	62417011	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-0.8029
chr1	20807333	20807456	protein_coding	Mcm3	exon	ENSMUSG00000041859	ProperStrand	142	chr7	116663633	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-2.2810
chr12	17552971	17553061	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr1	187066835	187066915	snoRNA	ENSMUSG00000077571_Snora36b	.	ENSMUSG00000077571	ProperStrand	244	1	-2.5027
chr14	76920368	76920384	lincRNA	4930444M15Rik	exon	ENSMUSG00000085974	NonProperStrand	14	chr12	85350481	85350499	protein_coding	Acot1	utr5	ENSMUSG00000072949	ProperStrand	72	1	-15.9229
chr6	47877134	47879070	protein_coding	Zfp212	exon	ENSMUSG00000052763	ProperStrand	20	chr1	145626081	145626200	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-11.0529
chr15	99042634	99042684	protein_coding	Spats2	exon	ENSMUSG00000051934	ProperStrand	71	chr4	131908689	131908750	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-4.6851
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	76518467	76518540	protein_coding	Col18a1	exon	ENSMUSG00000001435	ProperStrand	287	2	-3.1427
chr3	11580450	11580467	LINE	Lx3A	L1	chr3Lx3A11580299	ProperStrand	53	chr8	129468745	129468798	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-4.6513
chr3	89904119	89904177	protein_coding	Tpm3	utr3	ENSMUSG00000027940	ProperStrand	55	chr7	116664848	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.6996
chr7	129147415	129147467	protein_coding	Gga2	exon	ENSMUSG00000030872	ProperStrand	65	chr16	23111451	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.1508
chr8	11220225	11220267	protein_coding	Col4a1	exon	ENSMUSG00000031502	ProperStrand	64	chr8	4210840	4210857	protein_coding	BC068157	exon	ENSMUSG00000064125	NonProperStrand	7	1	-17.5833
chr10	120221002	120221046	protein_coding	Msrb3	utr3	ENSMUSG00000051236	ProperStrand	24	chr9	120037971	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-6.5078
chr13	29043776	29043792	protein_coding	Sox4	exon	ENSMUSG00000076431	ProperStrand	73	chr4	131908410	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.1477
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr11	82692475	82692491	protein_coding	Rad51l3	exon	ENSMUSG00000018841	ProperStrand	112	1	-4.6912
chr1	38144976	38145028	protein_coding	Rev1	exon	ENSMUSG00000026082	ProperStrand	48	chr4	56910512	56910577	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-6.5482
chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	chr7	120043364	120043432	protein_coding	Tead1	utr3	ENSMUSG00000055320	ProperStrand	217	1	-7.0169
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr2	35517015	35517031	protein_coding	Dab2ip	exon	ENSMUSG00000026883	NonProperStrand	58	1	-7.8629
chr18	56912667	56912687	protein_coding	Lmnb1	utr3	ENSMUSG00000024590	ProperStrand	176	chr5	121655016	121655097	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	3	-5.2176
chr3	136526736	136526753	protein_coding	Ppp3ca	intron	ENSMUSG00000028161	NonProperStrand	120	chr11	6428102	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.0026
chr2	90235293	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	66631761	66631779	protein_coding	Tll1	intron	ENSMUSG00000053626	NonProperStrand	18	1	-6.8363
mmu-miR-1949	2	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr11	6428060	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	4	-0.8740
chr4	117898566	117898666	protein_coding	Ptprf	exon	ENSMUSG00000033295	ProperStrand	337	chr15	34370545	34370607	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-0.8327
chr2	18764040	18764056	protein_coding	Pip4k2a	utr3	ENSMUSG00000026737	NonProperStrand	15	chr11	77995189	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-8.9745
chr3	108220193	108220212	LINE	Lx9	L1	chr3Lx9108220113	ProperStrand	1	chr4	131865856	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chrX	40944841	40944857	protein_coding	Gm362	exon	ENSMUSG00000078320	ProperStrand	129	chr2	32818889	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-4.0030
chr6	11937107	11937207	protein_coding	Phf14	exon	ENSMUSG00000029629	ProperStrand	26	chr16	23111451	23111503	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.5788
chr10	17547610	17547626	protein_coding	Txlnb	exon	ENSMUSG00000039891	ProperStrand	70	chr4	131908357	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.2038
chr2	9985901	9985917	protein_coding	Atp5c1	exon	ENSMUSG00000025781	ProperStrand	138	chr1	39605627	39605674	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-5.7001
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr19	24194441	24194502	protein_coding	Tjp2	exon	ENSMUSG00000024812	ProperStrand	63	1	-6.2727
chr7	106589691	106589709	protein_coding	Gdpd5	exon	ENSMUSG00000035314	NonProperStrand	14	chr14	28272978	28272994	protein_coding	D14Abb1e	exon	ENSMUSG00000040651	ProperStrand	49	1	-16.7620
chr1	162966189	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	chr5	149957299	149957333	snoRNA	ENSMUSG00000092764_AC122546.2	.	ENSMUSG00000092764	ProperStrand	9	4	-inf
chr1	136502255	136502287	protein_coding	Kdm5b	intron	ENSMUSG00000042207	ProperStrand	223	chr7	109830472	109830488	protein_coding	Trim68	intron	ENSMUSG00000073968	ProperStrand	23	1	-12.6221
chr2	129998643	129998709	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr4	94540757	94540785	protein_coding	Tek	utr3	ENSMUSG00000006386	ProperStrand	10	3	-21.5170
chr9	20299820	20299856	protein_coding	Zfp266	utr3	ENSMUSG00000060510	ProperStrand	20	chr2	26494708	26494760	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.1919
chr5	66006640	66006761	protein_coding	Pds5a	exon	ENSMUSG00000029202	ProperStrand	62	chr6	115758718	115758758	protein_coding	Rpl32	utr5	ENSMUSG00000057841	ProperStrand	137	1	-11.5904
chr11	77766914	77766932	protein_coding	Sez6	exon	ENSMUSG00000000632	NonProperStrand	8	chrX	147481613	147481647	protein_coding	Fgd1	intron	ENSMUSG00000025265	ProperStrand	96	1	-16.4090
chrX	70281388	70281447	protein_coding	Pnma5	exon	ENSMUSG00000050424	ProperStrand	12	chr9	120038567	120038657	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-10.0895
chr14	25311313	25312610	protein_coding	Rps24	exon	ENSMUSG00000025290	ProperStrand	110	chr3	68889049	68889140	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	5	-10.5898
chr9	107673007	107673024	protein_coding	Rbm5	intron	ENSMUSG00000032580	NonProperStrand	38	chr5	108336363	108336419	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-5.7729
chr5	46138328	46138428	protein_coding	Lcorl	exon	ENSMUSG00000015882	ProperStrand	15	chr16	23111772	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.3973
chr6	51071641	51071721	SINE	PB1D10	Alu	chr6PB1D1051071600	NonProperStrand	1	chr8	17416653	17416743	protein_coding	Csmd1	intron	ENSMUSG00000060924	ProperStrand	19	1	-inf
chr1	12898030	12898046	protein_coding	Slco5a1	intron	ENSMUSG00000025938	ProperStrand	11	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-11.1946
chr9	22193459	22193534	protein_coding	Anln	utr5	ENSMUSG00000036777	ProperStrand	133	chr1	162968460	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-4.5338
chr2	89368462	89368479	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	chr17	24857716	24857851	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-0.8799
chr13	112540780	112541440	protein_coding	Map3k1	exon	ENSMUSG00000021754	ProperStrand	113	chr9	108478264	108478281	protein_coding	Wdr6	exon	ENSMUSG00000066357	ProperStrand	30	1	-13.4493
chr7	52779250	52780380	protein_coding	Ppp1r15a	exon	ENSMUSG00000040435	ProperStrand	9	chr10	23505152	23505278	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-7.7215
chr7	47567135	47567215	LTR	ORR1A0	MaLR	chr7ORR1A047567035	ProperStrand	1	chr1	20127792	20127882	protein_coding	Pkhd1	intron	ENSMUSG00000043760	ProperStrand	15	1	-inf
chr1	138028064	138028138	protein_coding	Kif21b	utr5	ENSMUSG00000041642	ProperStrand	77	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-7.2305
chr1	34276767	34276814	protein_coding	Dst	intron	ENSMUSG00000026131	ProperStrand	461	chr11	98878375	98878443	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	2	-4.3384
chr1	95167797	95168187	protein_coding	Sned1	exon	ENSMUSG00000047793	ProperStrand	6	chr15	79913288	79913319	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-13.3721
chr14	19101510	19101610	protein_coding	Rpl15	utr3	ENSMUSG00000012405	ProperStrand	145	chr11	6428035	6428112	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.7064
chr3	40564296	40564312	protein_coding	Hspa4l	exon	ENSMUSG00000025757	NonProperStrand	10	chr4	131908689	131908799	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.3231
chr7	109161723	109162912	protein_coding	Numa1	exon	ENSMUSG00000066306	ProperStrand	148	chr19	8963087	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	4	-4.4603
chr3	86163725	86163746	protein_coding	Lrba	exon	ENSMUSG00000028080	ProperStrand	39	chrX	34622906	34622987	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	3	-9.7207
chr18	63937706	63937787	protein_coding	Wdr7	exon	ENSMUSG00000040560	ProperStrand	28	chr1	162965993	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	4	-15.8596
chr11	53075770	53075870	protein_coding	Hspa4	exon	ENSMUSG00000020361	ProperStrand	69	chr12	25393895	25394200	protein_coding	Rrm2	exon	ENSMUSG00000020649	ProperStrand	65	3	-20.3132
chr15	102139644	102139734	protein_coding	Espl1	exon	ENSMUSG00000058290	ProperStrand	172	chr18	35716738	35716818	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-0.7036
chr6	143429776	143429793	LINE	L1MA4	L1	chr6L1MA4143429728	ProperStrand	39	chr8	72613823	72613839	protein_coding	Hapln4	utr3	ENSMUSG00000007594	NonProperStrand	85	2	-18.7384
chr19	53069916	53069996	protein_coding	Xpnpep1	exon	ENSMUSG00000025027	ProperStrand	49	chr10	23505152	23505242	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.5211
chr12	112475947	112477255	protein_coding	Traf3	exon	ENSMUSG00000021277	ProperStrand	39	chr9	120038613	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.8301
chr15	79913288	79913347	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr2	38859664	38860285	protein_coding	Rpl35	exon	ENSMUSG00000062997	ProperStrand	68	1	-3.3623
mmu-miR-2137	0	19	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	chr7	117190002	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-1.8367
chr2	26768384	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	chr7	51505224	51505287	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	1	-1.1094
chr17	30162511	30162533	protein_coding	Zfand3	intron	ENSMUSG00000044477	NonProperStrand	7	chr8	73419703	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	NonProperStrand	53	1	-17.9162
chr19	7044143	7044160	protein_coding	Plcb3	utr5	ENSMUSG00000024960	NonProperStrand	2	chr11	62416575	62416653	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-12.5746
chr4	122970438	122970528	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	chr4	56910515	56910629	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	3	-3.1035
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr15	81494396	81494418	protein_coding	L3mbtl2	utr5	ENSMUSG00000022394	ProperStrand	19	1	-10.2993
chr19	46446526	46446583	protein_coding	Tmem180	exon	ENSMUSG00000025227	ProperStrand	20	chr18	74938044	74938130	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	ProperStrand	1022	1	-9.8661
chr13	23854205	23854230	protein_coding	Hist1h3a	utr5	ENSMUSG00000069265	ProperStrand	12	chr10	90581034	90581105	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-8.0249
chr13	23911286	23911376	protein_coding-noncoding	Slc17a2	utr5	ENSMUSG00000036110	NonProperStrand	1	chr13	23911133	23911223	protein_coding	Slc17a2	exon	ENSMUSG00000036110	NonProperStrand	1	1	-inf
chr8	125907239	125925434	protein_coding	Tcf25	utr3	ENSMUSG00000001472	ProperStrand	66	chr4	131865856	131865953	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-3.0155
chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr2	153050783	153050799	protein_coding	Tspyl3	exon	ENSMUSG00000074671	ProperStrand	228	1	-3.8781
chr2	90235319	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	25059948	25059964	protein_coding	Sept7	intron	ENSMUSG00000001833	ProperStrand	101	1	-3.4865
chr9	59513034	59513132	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr2	26768393	26768433	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	3	-2.0429
chr13	9833553	9833685	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr10	6063958	6063976	protein_coding	Akap12	intron	ENSMUSG00000038587	ProperStrand	1008	4	-2.7916
chr2	25421639	25421657	protein_coding	Mamdc4	exon	ENSMUSG00000026941	ProperStrand	11	chr4	131908752	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.1344
chr6	73109267	73109285	protein_coding	Dnahc6	exon	ENSMUSG00000052861	ProperStrand	8	chr1	39605609	39605696	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-11.4693
chr1	183853750	183853767	protein_coding	Enah	exon	ENSMUSG00000022995	NonProperStrand	33	chr4	131908236	131908355	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	5	-11.3829
chr11	82692475	82692491	protein_coding	Rad51l3	exon	ENSMUSG00000018841	ProperStrand	112	chr9	59519491	59519745	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	1	-5.9453
chr9	63868722	63868739	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	chr7	51807107	51807178	protein_coding	Nr1h2	exon	ENSMUSG00000060601	ProperStrand	14	1	-11.5449
chr9	21602970	21602986	protein_coding	Kank2	utr5	ENSMUSG00000032194	ProperStrand	196	chr2	166888978	166888996	snoRNA	ENSMUSG00000077515_SNORD12	.	ENSMUSG00000077515	ProperStrand	191	1	-8.6202
chr17	68140581	68140664	protein_coding	Lama1	exon	ENSMUSG00000032796	ProperStrand	168	chr5	131111716	131111733	protein_coding	Caln1	intron	ENSMUSG00000060371	NonProperStrand	15	1	-14.0714
chr16	23111779	23111837	protein_coding	Eif4a2	intron	ENSMUSG00000022884	ProperStrand	356	chr4	131866628	131866674	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	1	-5.5792
chr9	108385546	108385882	protein_coding	Lamb2	exon	ENSMUSG00000052911	ProperStrand	35	chr9	15119655	15119735	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.6006
chr4	132867680	132867723	protein_coding	Wdtc1	intron	ENSMUSG00000037622	ProperStrand	81	chr4	131865938	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.3246
chr14	8700109	8700199	protein_coding	Flnb	exon	ENSMUSG00000025278	ProperStrand	124	chr19	8800385	8800465	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-2.2522
chr8	3439719	3444892	protein_coding	Arhgef18	exon	ENSMUSG00000004568	ProperStrand	26	chr4	131908810	131908865	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.5345
chr19	9040342	9040376	protein_coding	Tut1	exon	ENSMUSG00000071645	ProperStrand	12	chr4	131908236	131908275	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.2270
chr4	153534526	153534542	protein_coding	Tprgl	exon	ENSMUSG00000029030	ProperStrand	50	chr5	130300419	130300446	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.8268
chr9	107483042	107483132	protein_coding	Nat6	utr5	ENSMUSG00000079334	ProperStrand	5	chr11	69481353	69481433	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-8.1843
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr13	22098354	22098371	protein_coding	Prss16	intron	ENSMUSG00000006179	ProperStrand	78	1	-3.9658
chr12	87811187	87811227	protein_coding	Esrrb	exon	ENSMUSG00000021255	ProperStrand	254	chrX	34622906	34622966	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-1.8379
chr17	83856348	83860914	protein_coding	Eml4	exon	ENSMUSG00000032624	ProperStrand	50	chr4	131865913	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.0577
chr2	90857789	90857805	protein_coding	Celf1	utr3	ENSMUSG00000005506	NonProperStrand	28	chr7	80563083	80563105	protein_coding	Rgma	utr3	ENSMUSG00000070509	ProperStrand	46	1	-15.3833
chr15	60661082	60661099	lincRNA	9930014A18Rik	exon	ENSMUSG00000044513	ProperStrand	54	chr4	131908355	131908440	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.5731
chr2	144091716	144091928	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	ProperStrand	549	chr3	123210854	123210979	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	5	-0.7023
chr11	99885311	99885327	protein_coding	Krt33b	exon	ENSMUSG00000057723	NonProperStrand	352	chr2	158182214	158182280	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-1.8305
chr11	48615205	48615261	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	chrX	139155042	139155059	protein_coding	Tmem164	intron	ENSMUSG00000047045	NonProperStrand	29	1	-11.2663
chr1	13276093	13362267	protein_coding	Ncoa2	utr5	ENSMUSG00000005886	NonProperStrand	9	chr7	150717297	150717325	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-9.3491
chr9	65335060	65335105	protein_coding	Spg21	utr3	ENSMUSG00000032388	ProperStrand	5	chr17	34420781	34420797	protein_coding	H2-Aa	exon	ENSMUSG00000036594	NonProperStrand	7	1	-20.9134
chr7	28094029	28094055	protein_coding	Ltbp4	exon	ENSMUSG00000040488	ProperStrand	91	chr4	131866614	131866673	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	3	-18.3672
chr11	106111241	106111316	protein_coding	Ftsj3	exon	ENSMUSG00000020706	ProperStrand	64	chr18	32263317	32263333	protein_coding	Iws1	utr3	ENSMUSG00000024384	ProperStrand	72	1	-12.8178
chr3	16726685	16726707	DNA	MER105	DNA	chr3MER10516726652	NonProperStrand	1	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-inf
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-4.9566
chr13	9833578	9833620	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr4	137074366	137120878	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	2	-1.4301
chr2	90235315	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	163201984	163202001	protein_coding	Jph2	exon	ENSMUSG00000017817	NonProperStrand	4	1	-10.0500
chr4	131399490	131399506	protein_coding	Mecr	exon	ENSMUSG00000028910	NonProperStrand	109	chr9	15119699	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.6557
chr4	10719250	10719340	lincRNA	1700123O12Rik	intron	ENSMUSG00000086080	NonProperStrand	5	chr15	36809415	36809505	protein_coding	Gm10384	utr5	ENSMUSG00000072618	NonProperStrand	1	1	-inf
chr3	106571747	106571763	protein_coding	Cd53	exon	ENSMUSG00000040747	NonProperStrand	1	chr2	158185586	158185653	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-inf
chr5	125505383	125505463	protein_coding	Ncor2	exon	ENSMUSG00000029478	ProperStrand	377	chr10	127484723	127484813	protein_coding	Naca	exon	ENSMUSG00000061315	ProperStrand	50	1	-9.9985
chr6	143129186	143129286	protein_coding	Etnk1	exon	ENSMUSG00000030275	ProperStrand	61	chr5	130300500	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.4812
chr11	113426901	113426943	protein_coding	Slc39a11	utr5	ENSMUSG00000041654	ProperStrand	25	chr19	8963027	8963066	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.8447
chr15	81700897	81702281	protein_coding	Phf5a	exon	ENSMUSG00000061360	ProperStrand	3	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-7.2242
chr10	42298355	42298372	protein_coding	Nr2e1	intron	ENSMUSG00000019803	ProperStrand	32	chr4	131908419	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.4145
chr18	60937530	60938088	protein_coding	Rps14	exon	ENSMUSG00000024608	ProperStrand	154	chr8	13171381	13172591	protein_coding	Lamp1	exon	ENSMUSG00000031447	ProperStrand	92	1	-10.5628
chr18	86087692	86087708	LTR	IAPLTR2_Mm	ERVK	chr18IAPLTR2_Mm86087306	NonProperStrand	1	chr16	23112993	23113010	protein_coding	Eif4a2	utr3	ENSMUSG00000022884	NonProperStrand	3	1	-inf
chr13	9833552	9833656	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr13	83673615	83673633	protein_coding	Mef2c	intron	ENSMUSG00000005583	NonProperStrand	3	1	-11.2562
chr11	98112472	98112515	protein_coding	Cdk12	utr3	ENSMUSG00000003119	ProperStrand	50	chr9	111127271	111127287	protein_coding	Lrrfip2	utr3	ENSMUSG00000032497	ProperStrand	28	1	-15.2127
chr2	32298806	32298829	protein_coding	Slc25a25	intron	ENSMUSG00000026819	ProperStrand	7	chr11	87172190	87172206	protein_coding	Ppm1e	exon	ENSMUSG00000046442	ProperStrand	112	1	-16.5302
chr11	48615813	48615872	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	chr7	118219574	118219627	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-1.2143
chr10	58684406	58684423	protein_coding	Sept10	utr5	ENSMUSG00000019917	NonProperStrand	9	chr8	47294700	47294736	protein_coding	Slc25a4	exon	ENSMUSG00000031633	ProperStrand	53	1	-17.2988
chr6	138343816	138343834	protein_coding	Lmo3	intron	ENSMUSG00000030226	ProperStrand	8	chr9	78327485	78327701	protein_coding	Eef1a1	exon	ENSMUSG00000037742	NonProperStrand	16	2	-19.5340
chr19	10978191	10979572	protein_coding	Prpf19	exon	ENSMUSG00000024735	ProperStrand	75	chr19	8963096	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	10	-inf
chr9	121593359	121593459	protein_coding	Sec22c	utr3	ENSMUSG00000061536	ProperStrand	2	chr16	23110840	23110918	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr2	79843543	79843559	protein_coding	Pde1a	intron	ENSMUSG00000059173	NonProperStrand	275	1	-5.5814
chr15	78922335	78922394	protein_coding	Eif3l	intron	ENSMUSG00000033047	ProperStrand	81	chr7	135856236	135857970	protein_coding	Mcmbp	exon	ENSMUSG00000048170	ProperStrand	87	23	-19.4596
chr2	133387122	133387138	protein_coding	Bmp2	exon	ENSMUSG00000027358	NonProperStrand	17	chr19	8963153	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.5881
chr5	74489282	74489323	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr11	119779995	119780125	protein_coding	Chmp6	utr3	ENSMUSG00000025371	ProperStrand	4	1	-11.2543
chr7	52713343	52713410	protein_coding	Ftl1	utr3	ENSMUSG00000050708	ProperStrand	807	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-2.1249
chr5	65780815	65781672	protein_coding	Rpl9	exon	ENSMUSG00000047215	ProperStrand	113	chr19	8800380	8800470	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	6	-13.9777
chr2	28324355	28324372	protein_coding	Mrps2	exon	ENSMUSG00000035772	NonProperStrand	47	chr7	52382753	52382832	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-7.2379
chr2	90235315	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	122961032	122963982	protein_coding	Pabpc4	exon	ENSMUSG00000011257	ProperStrand	85	1	-3.8052
chr5	122580411	122584741	protein_coding	Ccdc63	utr5	ENSMUSG00000043036	ProperStrand	120	chr11	97642737	97642756	protein_coding	Rpl23	exon	ENSMUSG00000071415	ProperStrand	920	1	-6.4808
chrX	90539054	90539072	protein_coding	Arx	intron	ENSMUSG00000035277	NonProperStrand	2	chr8	98245412	98245444	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	1	-17.4896
chr18	63153117	63153207	protein_coding	Napg	intron	ENSMUSG00000024581	ProperStrand	17	chr11	69481352	69481432	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.6167
chr5	149860389	149861405	protein_coding	Hmgb1	exon	ENSMUSG00000066551	ProperStrand	99	chr16	23110832	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	8	-3.8721
chr4	131908235	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	chr19	5038319	5038337	tRNA	tRNA711-SerGCT	.	925537	ProperStrand	6	1	-5.6461
chrX	149828130	149828146	protein_coding	Klf8	utr3	ENSMUSG00000041649	NonProperStrand	107	chr1	88252836	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-5.5030
chr11	115999916	115999932	protein_coding	Mrpl38	exon	ENSMUSG00000020775	NonProperStrand	65	chr2	166890837	166890858	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	1	-10.2205
chr5	134741640	134742480	protein_coding	Gtf2i	exon	ENSMUSG00000060261	ProperStrand	41	chr4	131908356	131908394	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.0019
chr8	108233711	108233729	protein_coding	4933405L10Rik	exon	ENSMUSG00000013158	ProperStrand	94	chr11	98878344	98878421	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-5.4042
chr11	58682398	58682415	protein_coding	2810021J22Rik	utr5	ENSMUSG00000020491	ProperStrand	162	chr17	23960015	23960072	protein_coding	Srrm2	intron	ENSMUSG00000039218	ProperStrand	521	1	-7.0078
chr2	24825186	24827046	protein_coding	Wdr85	exon	ENSMUSG00000026975	ProperStrand	323	chr6	124909440	124909471	protein_coding	Cops7a	utr3	ENSMUSG00000030127	ProperStrand	16	1	-12.6268
chr16	91854119	91854135	protein_coding	Itsn1	utr5	ENSMUSG00000022957	ProperStrand	172	chr11	101156402	101156437	protein_coding	Becn1	exon	ENSMUSG00000035086	ProperStrand	8	1	-15.3162
chr9	121823892	121823908	protein_coding	Cyp8b1	exon	ENSMUSG00000050445	NonProperStrand	101	chr10	40020808	40020854	protein_coding	Amd1	intron	ENSMUSG00000075232	ProperStrand	21	1	-14.3970
chr4	115243472	115243576	protein_coding	Cyp4a31	exon	ENSMUSG00000028712	ProperStrand	61	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-9.3362
chr5	74489203	74489293	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr3	75976323	75976344	protein_coding	Fstl5	intron	ENSMUSG00000034098	NonProperStrand	4	1	-11.2543
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr2	179992544	179992713	protein_coding	Rps21	exon	ENSMUSG00000039001	ProperStrand	46	1	-6.8963
chr7	107113655	107113726	processed_transcript	Rnf169	.	ENSMUSG00000058761	ProperStrand	4	chr19	8799071	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-11.4702
chr2	90235296	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr13	107737212	107737228	protein_coding	Dimt1	utr5	ENSMUSG00000021692	ProperStrand	185	2	-4.2669
chrX	20259288	20259507	protein_coding	Uba1	exon	ENSMUSG00000001924	ProperStrand	156	chr16	23111389	23111446	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	5	-2.8441
chr12	88488443	88496424	protein_coding	Pomt2	exon	ENSMUSG00000034126	NonProperStrand	331	chr2	144087398	144087463	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-3.2793
chr11	103935776	103935856	LTR	ORR1E	MaLR	chr11ORR1E103935663	NonProperStrand	1	chr14	111016759	111016849	LTR	ORR1C1	MaLR	chr14ORR1C1111016666	NonProperStrand	1	1	-inf
chr4	138992064	138992095	protein_coding	Ubr4	exon	ENSMUSG00000066036	ProperStrand	304	chr3	123210853	123210970	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-0.9665
chr1	79777585	79777631	protein_coding	Mrpl44	exon	ENSMUSG00000026248	ProperStrand	1	chr3	46250662	46250678	protein_coding	Pabpc4l	exon	ENSMUSG00000090919	ProperStrand	137	1	-inf
chr2	90235295	90235324	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	34747537	34747555	protein_coding	Agpat1	exon	ENSMUSG00000034254	NonProperStrand	39	1	-5.2962
chr17	47731741	47731798	protein_coding	Ccnd3	exon	ENSMUSG00000034165	ProperStrand	58	chr17	27698455	27699431	protein_coding	Hmga1	exon	ENSMUSG00000046711	ProperStrand	180	1	-11.1775
chr12	29319083	29319103	protein_coding	Rps7	exon	ENSMUSG00000061477	ProperStrand	129	chr17	35089182	35089233	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-4.0169
chr11	52202577	52202659	protein_coding	Vdac1	utr3	ENSMUSG00000020402	ProperStrand	107	chr9	120039655	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.3050
chr2	121949511	121949527	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	chrX	84172867	84172884	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	ProperStrand	18	1	-12.7410
chr7	87432772	87432831	protein_coding	Vps33b	intron	ENSMUSG00000030534	ProperStrand	13	chr10	110918597	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-10.5042
chr13	74811133	74811151	protein_coding	Erap1	exon	ENSMUSG00000021583	NonProperStrand	3	chr7	29136525	29136646	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-14.2802
chr5	107117751	107117768	protein_coding	Zfp644	intron	ENSMUSG00000049606	ProperStrand	35	chr4	131908808	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-3.6928
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	45704991	45708380	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	12	-7.4090
chr3	94808098	94808196	protein_coding	Pi4kb	intron	ENSMUSG00000038861	ProperStrand	3	chr19	8799592	8799644	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-13.1191
chr12	80083421	80083444	protein_coding	Tmem229b	intron	ENSMUSG00000046157	NonProperStrand	1	chr16	23111480	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-inf
chr2	27391471	27391561	protein_coding	Wdr5	utr3	ENSMUSG00000026917	ProperStrand	81	chr16	23111706	23111786	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.4475
chr11	64655135	64655151	lincRNA	Gm12292	exon	ENSMUSG00000086490	ProperStrand	1	chr16	23111373	23111430	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-inf
chr8	72691066	72691083	protein_coding	Mef2b	exon	ENSMUSG00000079033	ProperStrand	2	chr5	121655016	121655088	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-11.0755
chr17	36005177	36005195	protein_coding	Ppp1r18	exon	ENSMUSG00000034595	NonProperStrand	17	chr11	106362639	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-9.9536
chr15	76297268	76305253	protein_coding	Bop1	exon	ENSMUSG00000022557	ProperStrand	26	chr4	128609322	128609402	protein_coding	Adc	utr3	ENSMUSG00000028789	ProperStrand	10	1	-18.3738
chr6	119430541	119430594	protein_coding	Fbxl14	exon	ENSMUSG00000030019	ProperStrand	17	chr10	127521237	127521269	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	3	-inf
chr4	154500680	154500696	protein_coding	Morn1	intron	ENSMUSG00000029049	NonProperStrand	22	chr12	17552949	17552983	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-7.0768
chr13	79659338	79659354	LTR	RodERV21-int	ERV1	chr13RodERV21-int79658190	ProperStrand	43	chr16	23111778	23111797	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.4531
chr17	88390139	88390157	protein_coding	Msh6	utr3	ENSMUSG00000005370	ProperStrand	150	chr3	68889026	68889126	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-1.7093
chr10	20080843	20080859	protein_coding	Fam54a	utr3	ENSMUSG00000019992	ProperStrand	232	chr3	153574574	153574637	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	2	-11.2195
chr10	40924122	40924160	protein_coding	Fig4	intron	ENSMUSG00000038417	ProperStrand	18	chr13	90238585	90238680	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	3	-19.5966
chr9	59518440	59518496	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr11	77967392	77967408	protein_coding	BC017647	exon	ENSMUSG00000037750	NonProperStrand	3	1	-13.5343
chr9	44550634	44550734	protein_coding	Arcn1	utr3	ENSMUSG00000032096	ProperStrand	35	chr16	23110990	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.8578
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr13	21988808	21988833	miRNA	Mir1983	.	ENSMUSG00000088148	ProperStrand	23	1	-6.8488
chr1	180885279	180885295	protein_coding	Smyd3	utr3	ENSMUSG00000055067	NonProperStrand	190	chr1	88252877	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-4.3983
chr6	134961675	134961692	protein_coding	Ddx47	exon	ENSMUSG00000030204	NonProperStrand	3	chr11	6428077	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-15.7179
chr14	35156790	35156848	protein_coding	Glud1	exon	ENSMUSG00000021794	ProperStrand	72	chr1	20800273	20802048	protein_coding	Mcm3	exon	ENSMUSG00000041859	ProperStrand	142	4	-20.8794
mmu-miR-6240	2	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr11	97489600	97489617	protein_coding	E130012A19Rik	exon	ENSMUSG00000043439	NonProperStrand	110	1	-4.7257
chr5	151755613	151755630	protein_coding	Kl	exon	ENSMUSG00000058488	NonProperStrand	14	chr4	148573434	148576625	protein_coding	Kif1b	exon	ENSMUSG00000063077	ProperStrand	60	1	-16.2961
chr4	134368478	134368578	protein_coding	Tmem57	exon	ENSMUSG00000028826	ProperStrand	16	chr11	99885311	99885327	protein_coding	Krt33b	exon	ENSMUSG00000057723	NonProperStrand	352	1	-12.4553
chr4	100239788	100239806	pseudogene	Gm12699	.	ENSMUSG00000081553	NonProperStrand	1	chr1	89681225	89681315	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-inf
chr8	24559576	24559651	protein_coding	Sfrp1	utr3	ENSMUSG00000031548	ProperStrand	22	chr16	23110829	23110919	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.4786
chr2	103613211	103613950	protein_coding	Caprin1	exon	ENSMUSG00000027184	ProperStrand	145	chr7	71891283	71891365	protein_coding	Apba2	intron	ENSMUSG00000030519	ProperStrand	7	1	-15.9863
chr12	106923248	106923348	protein_coding	Atg2b	utr5	ENSMUSG00000041341	ProperStrand	67	chr5	121655129	121655154	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.5431
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr17	13112470	13112529	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-2.0033
chr4	116826697	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	chr9	15119302	15119415	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	5	-2.4342
chr5	110861963	110862063	protein_coding	Fbrsl1	utr5	ENSMUSG00000043323	ProperStrand	131	chr2	91436272	91436335	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-5.9531
chr2	26493497	26493517	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr14	76103803	76106929	protein_coding	Cog3	utr3	ENSMUSG00000034893	ProperStrand	37	2	-11.5168
chr11	119142053	119142142	protein_coding	Gaa	intron	ENSMUSG00000025579	ProperStrand	149	chr5	108336410	108336490	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-5.4500
chrX	45742293	45742393	protein_coding	Bcorl1	exon	ENSMUSG00000036959	ProperStrand	36	chr5	111121066	111121126	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-7.4519
chrX	130496426	130496668	protein_coding	Sytl4	exon	ENSMUSG00000031255	ProperStrand	169	chr17	35088961	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-3.8788
chr11	5029055	5029432	protein_coding	Emid1	exon	ENSMUSG00000034164	ProperStrand	14	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.3681
chr19	9047523	9047576	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	chr12	106269467	106269557	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-0.9783
chr5	65220935	65220951	protein_coding	Klf3	utr3	ENSMUSG00000029178	NonProperStrand	2	chr4	131908300	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-8.3123
chr16	37777390	37777408	protein_coding	Fstl1	exon	ENSMUSG00000022816	ProperStrand	179	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	2	-7.9080
chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	chr5	130924898	130924915	protein_coding	Caln1	utr5	ENSMUSG00000060371	ProperStrand	32	1	-12.0333
chr7	4395878	4395917	protein_coding	Rdh13	exon	ENSMUSG00000008435	ProperStrand	5	chr7	116663713	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-7.4047
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr7	67123693	67123759	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	1	-4.6154
chr14	32479927	32479943	protein_coding	Btd	exon	ENSMUSG00000021900	NonProperStrand	74	chr1	162968460	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-5.6672
chr13	64863287	64863304	protein_coding	Cntnap3	exon	ENSMUSG00000033063	ProperStrand	87	chr11	77995212	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-5.4541
chr3	138441177	138441216	protein_coding	Tspan5	utr5	ENSMUSG00000028152	ProperStrand	19	chr7	116664841	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-4.6802
chr18	10052132	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr19	48027696	48027713	protein_coding	Ccdc147	intron	ENSMUSG00000046585	ProperStrand	15	1	-11.6168
chr17	14340688	14340777	protein_coding	Dact2	utr5	ENSMUSG00000048826	ProperStrand	8	chr16	23110558	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-6.3329
chr1	169214948	169215048	protein_coding	Uck2	utr5	ENSMUSG00000026558	ProperStrand	45	chr18	35716808	35716831	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.6579
chr12	3909237	3909332	protein_coding	Dnmt3a	utr3	ENSMUSG00000020661	ProperStrand	40	chr12	70473451	70473467	protein_coding	Arf6	utr5	ENSMUSG00000044147	ProperStrand	32	1	-15.4053
chr10	95011768	95011868	protein_coding	Nudt4	utr3	ENSMUSG00000020029	ProperStrand	32	chr4	131908236	131908693	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	12	-19.3615
chr4	155562587	155562687	protein_coding	Agrn	intron	ENSMUSG00000041936	ProperStrand	175	chr16	17023593	17023611	protein_coding	Mapk1	exon	ENSMUSG00000063358	ProperStrand	67	1	-10.9434
chr5	125507572	125509056	protein_coding	Ncor2	exon	ENSMUSG00000029478	ProperStrand	377	chr17	35299519	35299599	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-1.5486
chr2	90235290	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr18	33954820	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	26	-1.3430
chr16	33625246	33646649	protein_coding	Slc12a8	exon	ENSMUSG00000035506	ProperStrand	52	chr2	166890504	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	2	-12.5396
chr7	126859864	126861661	protein_coding	Thumpd1	utr3	ENSMUSG00000030942	ProperStrand	14	chr10	23505150	23505240	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-9.3303
chr11	11701107	11701207	protein_coding	Fignl1	exon	ENSMUSG00000035455	ProperStrand	10	chr5	8429686	8429704	protein_coding	Slc25a40	intron	ENSMUSG00000054099	NonProperStrand	12	1	-21.0058
chr6	91202472	91202531	protein_coding	Fbln2	exon	ENSMUSG00000064080	ProperStrand	12	chr16	23111778	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.8390
chr18	24363854	24363870	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr1	141319671	141319687	protein_coding	Zbtb41	utr5	ENSMUSG00000033964	NonProperStrand	145	1	-9.6003
chr13	21272598	21272634	protein_coding	Trim27	exon	ENSMUSG00000021326	ProperStrand	28	chr3	123210853	123210894	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.3984
chr12	103807270	103807405	protein_coding	Itpk1	utr3	ENSMUSG00000057963	ProperStrand	47	chr1	162965980	162965999	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-4.0601
chr13	51743570	51743703	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	chr4	131865390	131865513	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	8	-2.4827
chr9	20722887	20722977	protein_coding	Dnmt1	exon	ENSMUSG00000004099	ProperStrand	91	chr11	69481337	69481417	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-4.3539
chr11	74741748	74741783	protein_coding	Smg6	intron	ENSMUSG00000038290	ProperStrand	29	chr1	24621072	24621119	protein_coding	Gm10925	utr3	ENSMUSG00000090378	ProperStrand	320	1	-11.4281
chr13	95856366	95856384	protein_coding	Pde8b	intron	ENSMUSG00000021684	ProperStrand	43	chr2	32818887	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-6.1258
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr10	23505148	23505278	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	8	-3.1585
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr4	106350865	106350881	protein_coding	Ttc4	exon	ENSMUSG00000025413	NonProperStrand	2	1	-15.2570
chr18	35255458	35255548	LTR	RLTR28	ERVL	chr18RLTR2835255087	NonProperStrand	1	chr18	35255665	35255755	SINE	B4	B4	chr18B435255599	NonProperStrand	1	1	-inf
chr14	13655343	13655362	protein_coding	Cadps	utr5	ENSMUSG00000054423	NonProperStrand	28	chr15	98356819	98356867	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	1	-9.2871
chr3	86590813	86590861	protein_coding	Dclk2	utr3	ENSMUSG00000028078	ProperStrand	50	chr17	24665421	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-5.2949
chr19	25484358	25484374	protein_coding	Kank1	exon	ENSMUSG00000032702	ProperStrand	218	chr2	166890840	166890858	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	1	-7.8028
chr4	130045557	130055338	protein_coding	Snrnp40	exon	ENSMUSG00000074088	ProperStrand	12	chr4	56910498	56910578	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-9.3593
chr1	137467197	137467254	protein_coding	Nav1	intron	ENSMUSG00000009418	NonProperStrand	60	chr9	123943816	123943833	protein_coding	Ccr3	exon	ENSMUSG00000035448	NonProperStrand	1	1	-inf
chr14	33152514	33152551	protein_coding	Ogdhl	exon	ENSMUSG00000021913	ProperStrand	182	chr16	23109050	23109090	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-5.1021
chr10	116344151	116355833	protein_coding	Rab3ip	exon	ENSMUSG00000064181	ProperStrand	18	chr4	131908754	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	7	-20.1496
chr6	128384184	128384204	protein_coding	Fkbp4	intron	ENSMUSG00000030357	NonProperStrand	42	chr6	71832629	71832685	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-6.3140
chr16	34670090	34671192	protein_coding	Ropn1	exon	ENSMUSG00000022832	NonProperStrand	3	chr17	47760381	47760461	protein_coding	Med20	utr3	ENSMUSG00000092558	ProperStrand	1	1	-inf
chr11	97642952	97643090	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	chr8	113366285	113366354	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	10	-6.2887
chr7	54442863	54442953	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	chr2	166890779	166890859	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	1	-6.8157
chr9	40612884	40612920	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	chr9	64143789	64143876	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-4.1026
chr7	38889465	38889531	protein_coding	Ccne1	intron	ENSMUSG00000002068	ProperStrand	14	chr16	23110968	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-4.0210
chr7	20282106	20282196	protein_coding	Apoe	exon	ENSMUSG00000002985	ProperStrand	231	chr5	130300462	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	32	-inf
chrX	11635848	11635865	protein_coding	Bcor	exon	ENSMUSG00000040363	NonProperStrand	293	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	2	-9.4160
chr1	180267373	180267570	protein_coding	Hnrnpu	exon	ENSMUSG00000039630	ProperStrand	286	chr11	69483136	69483236	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-1.5770
chr4	124796957	124796973	protein_coding	Zc3h12a	exon	ENSMUSG00000042677	ProperStrand	37	chr4	131865867	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.5639
chr2	103547780	103547819	protein_coding	Abtb2	exon	ENSMUSG00000032724	ProperStrand	12	chr5	151603276	151603292	protein_coding	Pds5b	exon	ENSMUSG00000034021	NonProperStrand	2	1	-inf
chr17	32258888	32258978	protein_coding	Notch3	exon	ENSMUSG00000038146	ProperStrand	181	chr18	33954829	33954909	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-1.6319
chr3	61648770	61648850	LINE	L1_Mm	L1	chr3L1_Mm61648632	NonProperStrand	1	chr3	61648920	61649010	LINE	L1_Mus4	L1	chr3L1_Mus461648897	ProperStrand	1	1	-inf
chr13	9833576	9833618	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr5	110835469	110835521	protein_coding	Fbrsl1	intron	ENSMUSG00000043323	ProperStrand	131	1	-3.4803
chr10	79316213	79316230	lincRNA	E130317F20Rik	exon	ENSMUSG00000091994	NonProperStrand	97	chr5	108336363	108336433	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-6.6655
chr10	12341172	12353751	protein_coding	Utrn	exon	ENSMUSG00000019820	ProperStrand	69	chr7	29136566	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.1324
chr9	56775853	56775870	protein_coding	Snx33	utr5	ENSMUSG00000032733	NonProperStrand	116	chr6	71832615	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-4.3390
chr8	74991867	74991932	protein_coding	Cherp	exon	ENSMUSG00000052488	ProperStrand	43	chr16	23111465	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-4.9920
chr7	112894951	112894969	protein_coding	Tpp1	utr3	ENSMUSG00000030894	NonProperStrand	25	chr17	56753088	56753371	protein_coding	Rpl36	exon	ENSMUSG00000057863	ProperStrand	62	2	-inf
chr1	127491938	127491955	protein_coding	Slc35f5	utr3	ENSMUSG00000026342	ProperStrand	70	chr10	23505151	23505267	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.0304
chr9	62743797	62750607	protein_coding	Pias1	exon	ENSMUSG00000032405	ProperStrand	13	chr1	66521957	66521973	protein_coding	Unc80	intron	ENSMUSG00000055567	NonProperStrand	212	2	-19.5312
chr2	110705835	110705856	protein_coding	Ano3	intron	ENSMUSG00000074968	ProperStrand	10	chr1	172975117	172975189	tRNA	tRNA699-GlyGCC	.	1176783	ProperStrand	660	1	-12.1774
chr5	36449301	36449319	protein_coding	Sorcs2	intron	ENSMUSG00000029093	ProperStrand	21	chr16	11144205	11144305	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	1	-12.5884
chr18	34855261	34855277	protein_coding	Gfra3	exon	ENSMUSG00000024366	NonProperStrand	2	chr2	16278620	16278638	protein_coding	Plxdc2	utr5	ENSMUSG00000026748	NonProperStrand	44	1	-inf
chr17	23944109	23944153	protein_coding	Srrm2	exon	ENSMUSG00000039218	ProperStrand	521	chr5	14252800	14252816	protein_coding	Sema3e	utr3	ENSMUSG00000063531	ProperStrand	125	1	-7.5217
chr8	86535304	86535320	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	chr15	79908929	79908983	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-3.6873
chr16	35016052	35016115	LINE	Lx4A	L1	chr16Lx4A35015695	NonProperStrand	5	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	5	-inf
chr1	164504523	164504540	protein_coding	Vamp4	exon	ENSMUSG00000026696	NonProperStrand	8	chr7	72017588	72017668	protein_coding	Ndnl2	exon	ENSMUSG00000070520	ProperStrand	10	1	-19.4909
chrX	166427088	166427282	protein_coding	Mid1	utr3	ENSMUSG00000035299	ProperStrand	209	chr18	33954816	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	7	-12.0520
mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr4	122537067	122537120	protein_coding	Cap1	utr3	ENSMUSG00000028656	ProperStrand	45	1	-6.4720
chr2	84530865	84531297	protein_coding	Zdhhc5	exon	ENSMUSG00000034075	NonProperStrand	144	chr9	120039533	120039585	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.8249
chrX	70703396	70703412	protein_coding	Haus7	exon	ENSMUSG00000031371	NonProperStrand	18	chr4	131908363	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.4481
chr5	138046361	138046433	protein_coding	Pcolce	utr3	ENSMUSG00000029718	ProperStrand	63	chr6	83111671	83111687	protein_coding	1700003E16Rik	exon	ENSMUSG00000030030	ProperStrand	352	1	-9.6707
chr2	27281841	27281857	protein_coding	Vav2	exon	ENSMUSG00000009621	NonProperStrand	31	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	4	-11.6796
chr4	140592741	140593829	protein_coding	Crocc	exon	ENSMUSG00000040860	ProperStrand	44	chr17	33961611	33966613	protein_coding	Ndufa7	exon	ENSMUSG00000041881	ProperStrand	64	1	-13.8116
chr9	57399977	57400027	protein_coding	Mpi	exon	ENSMUSG00000032306	ProperStrand	8	chr7	116664843	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-15.2269
chrX	130496426	130496668	protein_coding	Sytl4	exon	ENSMUSG00000031255	ProperStrand	169	chr8	63565201	63565218	protein_coding	Nek1	exon	ENSMUSG00000031644	ProperStrand	23	1	-13.1765
chr7	19935595	19935669	protein_coding-noncoding	Ercc1	utr5	ENSMUSG00000003549	ProperStrand	2	chr9	15119668	15119758	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-inf
chr2	125659462	125659513	protein_coding	Cops2	exon	ENSMUSG00000027206	ProperStrand	10	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	1	-10.6759
chr2	113942352	113944437	protein_coding	Aqr	exon	ENSMUSG00000040383	ProperStrand	70	chr11	97642984	97643074	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	5	-10.6838
chr2	32489502	32489602	protein_coding	Ak1	utr3	ENSMUSG00000026817	ProperStrand	33	chr11	69483136	69483198	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.5168
chr1	187208912	187210147	protein_coding	Eprs	exon	ENSMUSG00000026615	ProperStrand	149	chr8	12757419	12757437	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-6.7830
chr4	129662259	129662276	protein_coding	Bai2	utr5	ENSMUSG00000028782	ProperStrand	119	chr19	8798740	8798797	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-3.5103
chr9	78023109	78023180	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr6	115758042	115758132	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	8	-3.8633
chr19	5953729	5953819	protein_coding	Pola2	exon	ENSMUSG00000024833	ProperStrand	29	chr14	33005155	33005235	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-5.3955
chr8	94190886	94190986	protein_coding	Fto	utr3	ENSMUSG00000055932	ProperStrand	34	chr15	79913288	79913310	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.6681
chr5	136344186	136344202	protein_coding	Srrm3	utr3	ENSMUSG00000039860	ProperStrand	41	chr5	121655016	121655099	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.4679
chr17	43843088	43843104	protein_coding	Cyp39a1	intron	ENSMUSG00000023963	NonProperStrand	81	chr17	39985356	39985393	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-5.3450
chr2	157820355	157820455	protein_coding	Tti1	intron	ENSMUSG00000027650	ProperStrand	17	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.8783
chr11	87541601	87542970	protein_coding	Rnf43	exon	ENSMUSG00000034177	ProperStrand	7	chr7	29136526	29136598	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-6.5022
chr13	9833553	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr2	164590644	164590706	antisense	Gm11457	.	ENSMUSG00000086453	ProperStrand	7	3	-21.8740
chr1	89778481	89811733	protein_coding	Dgkd	exon	ENSMUSG00000070738	ProperStrand	39	chr16	23110988	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.5380
chr2	25294472	25294590	protein_coding	Abca2	exon	ENSMUSG00000026944	ProperStrand	57	chr2	91436309	91436336	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-7.5997
chr1	20922259	20922275	protein_coding	Paqr8	utr5	ENSMUSG00000025931	NonProperStrand	60	chr1	162968211	162968289	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	5	-20.9780
chr7	13610150	13615814	protein_coding	Trim28	exon	ENSMUSG00000005566	ProperStrand	296	chr11	69481335	69481466	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	5	-5.2206
chr2	32819018	32819089	protein_coding	Rpl12	exon	ENSMUSG00000038900	ProperStrand	167	chr7	52714984	52715084	protein_coding	Ftl1	utr5	ENSMUSG00000050708	ProperStrand	807	1	-6.0880
chr5	53215127	53215171	protein_coding	Zcchc4	utr3	ENSMUSG00000029179	ProperStrand	15	chr2	66137843	66140427	protein_coding	Scn1a	exon	ENSMUSG00000064329	ProperStrand	25	1	-17.7812
chr2	174240343	174240433	LINE	L2a	L2	chr2L2a174240320	NonProperStrand	1	chr2	174240221	174240311	LTR	MT2A	ERVL	chr2MT2A174240192	NonProperStrand	1	1	-inf
chr5	74489203	74489293	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr8	109593420	109593495	protein_coding	Terf2	utr3	ENSMUSG00000031921	ProperStrand	34	1	-6.7455
chr4	117910503	117910593	protein_coding	Ptprf	exon	ENSMUSG00000033295	ProperStrand	337	chr13	51743568	51743648	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-3.5371
chr5	73563222	73563238	protein_coding	Fryl	intron	ENSMUSG00000070733	ProperStrand	173	chr11	62416575	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-3.1751
chr11	45957266	45957356	protein_coding	Adam19	utr3	ENSMUSG00000011256	NonProperStrand	8	chr11	48617364	48617454	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	NonProperStrand	3	1	-21.9894
chr5	28085071	28085136	protein_coding	Paxip1	exon	ENSMUSG00000002221	ProperStrand	34	chr12	60141413	60141503	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-7.9646
chr11	102170983	102171004	protein_coding	Ubtf	exon	ENSMUSG00000020923	ProperStrand	66	chr7	29136523	29136581	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.2056
chr3	117017428	117017518	LINE	L1_Mus1	L1	chr3L1_Mus1117017245	NonProperStrand	1	chr5	36168240	36168330	protein_coding	Ablim2	intron	ENSMUSG00000029095	ProperStrand	36	1	-inf
chr13	67696244	67697614	protein_coding	AA987161	exon	ENSMUSG00000058093	ProperStrand	5	chr1	162967115	162967134	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	1	-13.8426
chr6	116597627	116597644	protein_coding	Rassf4	exon	ENSMUSG00000042129	NonProperStrand	11	chr7	29136555	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	4	-17.7447
chr2	93784059	93784076	LTR	MTEa	MaLR	chr2MTEa93783777	NonProperStrand	50	chr11	97533887	97534792	protein_coding	Mllt6	exon	ENSMUSG00000038437	ProperStrand	110	1	-12.4642
chr1	191058376	191058393	protein_coding	Kcnk2	intron	ENSMUSG00000037624	ProperStrand	56	chr17	24665422	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	2	-8.3618
chr12	111929647	111929737	protein_coding	Hsp90aa1	utr3	ENSMUSG00000021270	ProperStrand	751	chr19	6458042	6458059	protein_coding	Nrxn2	intron	ENSMUSG00000033768	NonProperStrand	8	1	-12.3919
chr4	63389602	63389618	protein_coding	Tnfsf15	utr3	ENSMUSG00000050395	NonProperStrand	121	chr9	15119968	15120042	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-5.8676
chr16	14142739	14146051	protein_coding	4921513D23Rik	exon	ENSMUSG00000060657	ProperStrand	47	chr9	120039567	120039626	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	5	-15.8164
chr9	15120002	15120092	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	chr14	52829488	52829568	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-4.6674
chr1	72206557	72206647	protein_coding	Mreg	utr3	ENSMUSG00000039395	ProperStrand	63	chr9	120039538	120039618	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.2300
chr6	128384402	128387768	protein_coding	Fkbp4	exon	ENSMUSG00000030357	ProperStrand	114	chr7	29136526	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	8	-14.1375
chr7	35013999	35014375	protein_coding	Gpi1	exon	ENSMUSG00000036427	ProperStrand	288	chr5	121655036	121655116	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-1.1605
chr9	112088269	112088423	protein_coding-noncoding	Arpp21	utr3	ENSMUSG00000032503	ProperStrand	28	chr16	23110828	23110962	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.2442
chr8	89408839	89408894	protein_coding	N4bp1	utr5	ENSMUSG00000031652	ProperStrand	98	chr16	23111743	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-2.2876
chr18	38004227	38004277	protein_coding	Diap1	utr3	ENSMUSG00000024456	ProperStrand	77	chr8	13558670	13558772	protein_coding	1700029H14Rik	exon	ENSMUSG00000031452	ProperStrand	19	1	-15.1416
chr14	33474156	33474175	protein_coding	3425401B19Rik	exon	ENSMUSG00000071540	NonProperStrand	2	chr17	35087897	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-12.6096
chr1	55064373	55064473	protein_coding	Sf3b1	exon	ENSMUSG00000025982	ProperStrand	158	chr8	129468801	129468876	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-2.6426
chr12	87845346	87845369	protein_coding	Esrrb	intron	ENSMUSG00000021255	ProperStrand	254	chr19	53082307	53082324	protein_coding	Xpnpep1	intron	ENSMUSG00000025027	NonProperStrand	58	1	-10.4886
chr1	75136227	75136247	protein_coding	1810031K17Rik	exon	ENSMUSG00000033159	ProperStrand	24	chr9	40612117	40612164	snoRNA	ENSMUSG00000075924_Snord14d	.	ENSMUSG00000075924	ProperStrand	131	2	-19.1748
chr19	6261807	6261824	protein_coding	Atg2a	exon	ENSMUSG00000024773	ProperStrand	97	chr15	79908964	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	2	-7.5461
chr9	62631453	62631474	protein_coding	Itga11	utr3	ENSMUSG00000032243	ProperStrand	7	chr19	8799021	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-10.2203
chr18	36018858	36018958	protein_coding	Cxxc5	exon	ENSMUSG00000046668	ProperStrand	30	chr16	23110491	23110522	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.7075
chr4	41160856	41160879	protein_coding	Ubap2	utr5	ENSMUSG00000028433	ProperStrand	292	chr8	125415654	125415727	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	3	-14.7186
chr9	108594652	108594669	protein_coding	Prkar2a	utr5	ENSMUSG00000032601	ProperStrand	43	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.3073
chr2	121949510	121949528	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	chrX	71517822	71517951	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	3	-8.9807
chr6	72581243	72581331	protein_coding	Tcf7l1	exon	ENSMUSG00000055799	ProperStrand	61	chr4	131865407	131865464	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	5	-16.3723
chrX	84483703	84483750	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	1	-3.6617
chr11	62416575	62416597	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr7	16524089	16524182	protein_coding	Gltscr2	intron	ENSMUSG00000041560	ProperStrand	127	4	-inf
chr11	106643892	106643937	protein_coding	Ddx5	exon	ENSMUSG00000020719	ProperStrand	181	chr13	112538493	112538510	protein_coding	Map3k1	utr3	ENSMUSG00000021754	NonProperStrand	3	1	-17.6648
chr15	80009547	80009647	protein_coding	Mgat3	intron	ENSMUSG00000042428	ProperStrand	14	chr4	131908236	131908296	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.9265
chr10	20777959	20778021	protein_coding	Ahi1	exon	ENSMUSG00000019986	ProperStrand	10	chr12	112565198	112565215	protein_coding	Cdc42bpb	intron	ENSMUSG00000021279	ProperStrand	128	1	-15.4531
chr2	131148493	131148510	protein_coding	Rnf24	intron	ENSMUSG00000048911	ProperStrand	11	chr10	80077898	80077947	protein_coding	Scamp4	utr3	ENSMUSG00000078441	ProperStrand	54	1	-17.0052
chr19	8893681	8893746	protein_coding	Ttc9c	utr5	ENSMUSG00000071660	ProperStrand	4	chr16	23111741	23111778	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-7.1763
chr5	122692261	122692278	protein_coding	Tctn1	intron	ENSMUSG00000038593	ProperStrand	34	chr16	23111778	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.8630
chr6	124882549	124883993	protein_coding	Mlf2	exon	ENSMUSG00000030120	ProperStrand	80	chr16	23111466	23111500	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-2.9451
chr17	25283313	25283329	protein_coding	Clcn7	exon	ENSMUSG00000036636	NonProperStrand	34	chr10	90432659	90432678	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	1	-11.7649
chr4	53015201	53015217	SINE	B1F1	Alu	chr4B1F153015138	ProperStrand	102	chr3	129584310	129584356	protein_coding	Pla2g12a	intron	ENSMUSG00000027999	ProperStrand	6	1	-16.9302
chr9	57438182	57438198	protein_coding	Ulk3	exon	ENSMUSG00000032308	ProperStrand	9	chr4	116883488	116883564	snRNA	ENSMUSG00000070237_U5	.	ENSMUSG00000070237	ProperStrand	154	1	-15.3100
chr4	132621112	132621202	protein_coding	Ahdc1	exon	ENSMUSG00000037692	ProperStrand	100	chr2	32818803	32818883	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	2	-7.4545
chr15	74551987	74552077	protein_coding	4930572J05Rik	exon	ENSMUSG00000056665	ProperStrand	8	chr7	148634703	148634783	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	6	-20.7488
chr16	25069108	25069124	lincRNA	A230028O05Rik	exon	ENSMUSG00000085040	NonProperStrand	8	chr8	73419698	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-7.0879
chr12	88488443	88496424	protein_coding	Pomt2	exon	ENSMUSG00000034126	NonProperStrand	331	chr17	35089181	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-2.3336
chr7	50726662	50726691	protein_coding	Vsig10l	utr3	ENSMUSG00000070604	ProperStrand	6	chr16	23111374	23111464	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-13.4869
chr3	88715213	88715230	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr4	116826699	116826763	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	2	-2.4670
chr5	119201891	119201933	protein_coding	Med13l	exon	ENSMUSG00000018076	ProperStrand	226	chr2	91436284	91436335	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	3	-11.5348
chr9	122075466	122075482	protein_coding	Snrk	exon	ENSMUSG00000038145	NonProperStrand	97	chr1	93263065	93263081	protein_coding	Fam132b	exon	ENSMUSG00000047443	NonProperStrand	98	1	-11.3622
chr18	85020813	85020886	protein_coding	Cyb5	utr5	ENSMUSG00000024646	ProperStrand	12	chr12	82317769	82317785	protein_coding	Slc8a3	exon	ENSMUSG00000079055	ProperStrand	126	1	-15.0988
chr7	52632040	52632081	protein_coding	Snrnp70	exon	ENSMUSG00000063511	ProperStrand	61	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.7424
chr4	41146295	41146571	protein_coding	Ubap2	exon	ENSMUSG00000028433	ProperStrand	292	chr11	116704532	116704549	protein_coding	Jmjd6	utr5	ENSMUSG00000056962	ProperStrand	92	1	-9.2842
chr13	108679651	108679672	protein_coding	Zswim6	utr5	ENSMUSG00000032846	NonProperStrand	19	chr5	151755616	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-10.0630
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr17	35299507	35299641	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	3	-1.7536
chr13	21486735	21486825	protein_coding	Zkscan3	intron	ENSMUSG00000021327	ProperStrand	9	chr3	94683582	94683666	protein_coding	Pogz	exon	ENSMUSG00000038902	ProperStrand	65	1	-16.9579
chr1	88247814	88247835	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	chr14	31829399	31829461	snoRNA	ENSMUSG00000077797_Snord19	.	ENSMUSG00000077797	ProperStrand	62	3	-11.8613
chr11	12154722	12154777	protein_coding	Cobl	exon	ENSMUSG00000020173	ProperStrand	133	chr14	56215278	56215294	protein_coding	Rnf31	utr5	ENSMUSG00000047098	NonProperStrand	5	1	-16.8259
chr4	144746164	144746254	protein_coding	Vps13d	exon	ENSMUSG00000020220	ProperStrand	59	chr11	69481377	69481457	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.2310
chr4	116883487	116883550	snRNA	ENSMUSG00000070237_U5	.	ENSMUSG00000070237	ProperStrand	154	chr1	162967545	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-1.8536
chr17	32454069	32454169	protein_coding	Akap8	exon	ENSMUSG00000024045	ProperStrand	339	chr19	8799849	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-1.8441
chr2	156090079	156092963	protein_coding	Phf20	exon	ENSMUSG00000038116	ProperStrand	60	chr17	13112459	13112539	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-4.5798
chr10	119668258	119668348	protein_coding	Llph	exon	ENSMUSG00000020224	ProperStrand	9	chr3	123210899	123210979	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.6210
chr9	103257148	103257241	protein_coding	Cdv3	utr3	ENSMUSG00000032803	ProperStrand	68	chr19	8799859	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	5	-18.0450
chr19	46139562	46139603	protein_coding	Pprc1	exon	ENSMUSG00000055491	ProperStrand	143	chr9	120039567	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.8358
chr9	78023110	78023154	misc_RNA	7SK	.	ENSMUSG00000065037	NonProperStrand	6	chr3	108357419	108357495	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	NonProperStrand	17	1	-19.9795
chr18	70569591	70569671	LTR	MTD	MaLR	chr18MTD70569590	NonProperStrand	1	chr18	70569358	70569448	SINE	B4A	B4	chr18B4A70569275	NonProperStrand	1	1	-inf
chr4	123045236	123213448	protein_coding	Macf1	exon	ENSMUSG00000028649	ProperStrand	320	chr1	88252837	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	2	-5.8309
chr11	95164534	95167363	protein_coding	Myst2	exon	ENSMUSG00000038909	ProperStrand	56	chr19	8963093	8963173	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	4	-8.7546
chr11	23827581	23827671	LTR	RLTR14-int	ERV1	chr11RLTR14-int23826858	NonProperStrand	1	chr8	28146740	28146820	protein_coding	Erlin2	intron	ENSMUSG00000031483	NonProperStrand	2	1	-inf
chr11	24063882	24063899	protein_coding	Bcl11a	exon	ENSMUSG00000000861	ProperStrand	30	chr5	121655101	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.0733
chr8	113581191	113581250	protein_coding	Aars	utr3	ENSMUSG00000031960	ProperStrand	355	chr14	122353115	122353131	protein_coding	Gpr183	utr3	ENSMUSG00000051212	ProperStrand	1	1	-inf
chr17	47943489	47943507	LTR	MLT1J	MaLR	chr17MLT1J47943258	ProperStrand	8	chrX	71534020	71534040	protein_coding	Taz	exon	ENSMUSG00000009995	ProperStrand	59	1	-17.3520
chr13	29043775	29043792	protein_coding	Sox4	exon	ENSMUSG00000076431	ProperStrand	73	chr9	15119631	15119762	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	4	-8.4625
chr2	90235317	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr12	60774059	60774112	snoRNA	ENSMUSG00000077603_SNORA3	.	ENSMUSG00000077603	ProperStrand	185	1	-2.4172
chr2	26493475	26493500	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr4	116862598	116862663	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	1	-2.0673
chr8	86188416	86188506	protein_coding	Gipc1	utr3	ENSMUSG00000019433	ProperStrand	60	chr9	120039540	120039620	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.3187
chr9	54975675	54975765	LINE	Lx	L1	chr9Lx54975489	ProperStrand	1	chrX	37466099	37466179	processed_transcript	Gm14643	.	ENSMUSG00000086157	NonProperStrand	2	1	-inf
chr17	35283296	35283741	protein_coding	Bag6	exon	ENSMUSG00000024392	ProperStrand	181	chr19	33664748	33664765	protein_coding	Lipo1	utr5	ENSMUSG00000024766	NonProperStrand	10	1	-14.7758
chr8	13416897	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr14	24513141	24513158	protein_coding	Kcnma1	intron	ENSMUSG00000063142	ProperStrand	26	1	-8.1274
chr7	149170854	149171340	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	chr4	131908689	131908871	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	9	-6.8824
chr2	26493429	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	NonProperStrand	10	chr15	34370543	34370623	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	NonProperStrand	21	1	-19.0859
chr9	59523497	59523539	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr11	5180669	5180685	protein_coding	Znrf3	utr3	ENSMUSG00000041961	NonProperStrand	210	1	-4.7269
chr6	82678797	82678843	protein_coding	Hk2	exon	ENSMUSG00000000628	ProperStrand	88	chr9	20830887	20830903	protein_coding	Icam1	exon	ENSMUSG00000037405	ProperStrand	44	1	-13.1720
chr15	79913288	79913331	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr13	23790018	23790071	protein_coding	Hist1h4c	exon	ENSMUSG00000060678	ProperStrand	19	1	-5.8137
chr1	133141328	133141345	protein_coding	Rassf5	exon	ENSMUSG00000026430	ProperStrand	73	chr17	35299506	35299591	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	3	-10.5626
chr11	12364875	12364893	protein_coding	Cobl	utr5	ENSMUSG00000020173	NonProperStrand	9	chr2	38012954	38012970	protein_coding	Dennd1a	intron	ENSMUSG00000035392	NonProperStrand	128	1	-15.6566
chr5	74489202	74489292	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr17	25360076	25360094	protein_coding	Unkl	intron	ENSMUSG00000015127	ProperStrand	4	1	-11.2543
chr3	104607308	104607409	protein_coding	Mov10	exon	ENSMUSG00000002227	NonProperStrand	2	chr15	81937523	81937539	protein_coding	Mei1	exon	ENSMUSG00000068117	ProperStrand	53	1	-inf
chr2	59012358	59012374	protein_coding	Pkp4	intron	ENSMUSG00000026991	NonProperStrand	11	chr1	162965980	162965999	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-6.9371
chr1	6224080	6224313	protein_coding	Rb1cc1	exon	ENSMUSG00000025907	ProperStrand	13	chr19	17900099	17900117	snoRNA	ENSMUSG00000089540_snoU13	.	ENSMUSG00000089540	ProperStrand	99	1	-15.4249
chr8	81572056	81572094	protein_coding	Zfp827	intron	ENSMUSG00000071064	ProperStrand	78	chr16	23110540	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-3.6593
chr9	67795929	67795979	protein_coding	Vps13c	exon	ENSMUSG00000035284	ProperStrand	69	chr9	15119993	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-6.9752
chr11	102297108	102297198	protein_coding	Grn	exon	ENSMUSG00000034708	ProperStrand	43	chr15	98350203	98350283	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-5.4077
chr12	70473691	70473746	protein_coding	Arf6	utr5	ENSMUSG00000044147	ProperStrand	32	chr4	131865930	131865988	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.8186
chr11	121157182	121157266	protein_coding	Foxk2	intron	ENSMUSG00000039275	ProperStrand	38	chr11	32393310	32393329	protein_coding	Ubtd2	intron	ENSMUSG00000044949	NonProperStrand	5	1	-18.6660
chr7	107493477	107493557	protein_coding	Ppme1	exon	ENSMUSG00000030718	ProperStrand	38	chr11	83254019	83254035	protein_coding	1700020L24Rik	exon	ENSMUSG00000035085	NonProperStrand	88	1	-13.4665
chr5	14252800	14252816	protein_coding	Sema3e	utr3	ENSMUSG00000063531	ProperStrand	125	chr17	35089181	35089232	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-4.0760
chr9	32454666	32454684	protein_coding	Ets1	intron	ENSMUSG00000032035	NonProperStrand	7	chr11	6428123	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-7.4403
chr5	135635277	135635293	protein_coding	Tbl2	exon	ENSMUSG00000005374	NonProperStrand	4	chr2	164257636	164257652	protein_coding	Sdc4	intron	ENSMUSG00000017009	ProperStrand	177	1	-16.7856
chr1	89377777	89377794	protein_coding	Ngef	exon	ENSMUSG00000026259	NonProperStrand	41	chr16	23110829	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-2.4460
chr7	103745255	103745271	antisense	Gm15414	.	ENSMUSG00000085792	ProperStrand	1	chr16	23110893	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr1	155102480	155105242	protein_coding	Lamc1	exon	ENSMUSG00000026478	ProperStrand	239	chr9	119664282	119664299	protein_coding	Scn11a	exon	ENSMUSG00000034115	ProperStrand	55	1	-10.7172
chr9	40612870	40612921	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	chr5	130300460	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-0.9792
chr9	103401280	103401296	protein_coding	Tmem108	exon	ENSMUSG00000042757	NonProperStrand	323	chr7	117190014	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-0.7470
chr16	16983743	17016001	protein_coding	Mapk1	exon	ENSMUSG00000063358	ProperStrand	67	chr18	33954900	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-3.3035
chr5	66135294	66135384	LTR	MT2B	ERVL	chr5MT2B66135164	NonProperStrand	1	chr5	66135454	66135544	SINE	B2_Mm1t	B2	chr5B2_Mm1t66135359	ProperStrand	1	1	-inf
chr7	52381973	52382009	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	chr11	62418013	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	2	-0.7861
chr4	155114013	155114030	protein_coding	Gm5151	exon	ENSMUSG00000084845	ProperStrand	16	chr7	117189932	117190004	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-5.8807
chr15	79913307	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr7	109149271	109149287	protein_coding	Numa1	exon	ENSMUSG00000066306	NonProperStrand	171	1	-1.7906
chr5	139707111	139707144	protein_coding	Sun1	exon	ENSMUSG00000036817	ProperStrand	108	chr11	74718958	74719009	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	1	-7.8508
chrX	72330027	72330044	protein_coding	Gab3	exon	ENSMUSG00000032750	NonProperStrand	6	chr11	77995202	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-10.9137
chr1	93950627	93950643	protein_coding	Hdac4	intron	ENSMUSG00000026313	NonProperStrand	15	chr11	116938556	116938622	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-8.9506
chr18	75160884	75161331	protein_coding	Rpl17	exon	ENSMUSG00000062328	ProperStrand	90	chr18	35716840	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.5346
chr7	133939602	133939731	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	chr4	138958672	138958703	protein_coding	Ubr4	exon	ENSMUSG00000066036	ProperStrand	304	1	-5.1414
chr10	39679447	39679464	protein_coding	BC021785	utr3	ENSMUSG00000038528	NonProperStrand	13	chr7	116663663	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-8.9404
chr9	81949793	81949813	protein_coding	Mei4	intron	ENSMUSG00000043289	NonProperStrand	42	chr16	23111389	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-3.2870
chr15	72734081	72755957	protein_coding	Trappc9	exon	ENSMUSG00000047921	ProperStrand	44	chr4	125986847	125986863	protein_coding	Col8a2	utr5	ENSMUSG00000056174	NonProperStrand	27	1	-15.5654
chr1	23898811	23928925	protein_coding	Smap1	exon	ENSMUSG00000026155	ProperStrand	10	chr19	8798504	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-8.8233
chr7	116663649	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	chr9	64143736	64143877	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	9	-1.4769
chr10	126622346	126622664	protein_coding	Arhgef25	exon	ENSMUSG00000019467	ProperStrand	12	chr15	34370545	34370619	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-6.6995
chr19	5104988	5105088	protein_coding	Rab1b	intron	ENSMUSG00000024870	ProperStrand	133	chr2	26768372	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-4.0718
chr6	88834811	88834911	protein_coding	Mcm2	intron	ENSMUSG00000002870	ProperStrand	83	chr16	23111451	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.8462
chr1	171758465	171758545	LTR	MLT1E1	MaLR	chr1MLT1E1171758316	ProperStrand	1	chr1	171758673	171758763	LTR	MLT2B3	ERVL	chr1MLT2B3171758656	ProperStrand	1	1	-inf
chr7	109309149	109309239	protein_coding	Nup98	utr5	ENSMUSG00000063550	ProperStrand	100	chr7	118219596	118219676	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-3.2241
chr3	95964235	95964252	protein_coding	Otud7b	utr3	ENSMUSG00000038495	NonProperStrand	4	chr1	20807508	20807524	protein_coding	Mcm3	exon	ENSMUSG00000041859	ProperStrand	142	1	-17.2252
chr10	80773488	80773504	protein_coding	Pip5k1c	exon	ENSMUSG00000034902	NonProperStrand	6	chr17	36097663	36097764	protein_coding	Abcf1	exon	ENSMUSG00000038762	ProperStrand	206	1	-15.6033
chr8	44381035	44381089	protein_coding	Zfp42	exon	ENSMUSG00000051176	ProperStrand	127	chr18	35716840	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.0594
chr13	100195775	100195791	protein_coding	Mtap1b	exon	ENSMUSG00000052727	NonProperStrand	20	chr1	39605592	39605691	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-9.5593
chr7	63410443	63410474	protein_coding	Herc2	exon	ENSMUSG00000030451	ProperStrand	66	chr18	35714208	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	3	-8.2296
chr1	13556340	13556430	protein_coding	Tram1	utr3	ENSMUSG00000025935	ProperStrand	28	chr4	131865929	131865978	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-5.3074
chr17	35089181	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	chr1	9932550	9932626	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	2	-1.5933
chr8	125011063	125011143	protein_coding	Gm20388	intron	ENSMUSG00000092329	ProperStrand	295	chr15	34370557	34370647	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	NonProperStrand	21	3	-19.2348
chr17	35299507	35299605	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	chr15	98356821	98356913	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	13	-16.2269
chr6	66846900	66846916	protein_coding	Gng12	utr5	ENSMUSG00000036402	ProperStrand	6	chr11	6428103	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-7.7732
chr8	13416895	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr6	97112810	97112876	snoRNA	ENSMUSG00000065728_SNORA36	.	ENSMUSG00000065728	ProperStrand	158	1	-4.5694
chr17	28033014	28033030	protein_coding	Uhrf1bp1	utr3	ENSMUSG00000039512	ProperStrand	79	chr9	43920808	43920826	protein_coding	Rnf26	exon	ENSMUSG00000053128	ProperStrand	30	1	-14.1714
chr7	148586233	148586313	protein_coding	Taldo1	exon	ENSMUSG00000025503	ProperStrand	28	chr4	149100135	149100225	protein_coding	Tmem201	utr3	ENSMUSG00000044700	ProperStrand	60	1	-14.8589
chrX	124481137	124481154	LTR	RMER17A2	ERVK	chrXRMER17A2124481035	ProperStrand	8	chr19	8799581	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-10.8847
chr6	120883621	120883648	protein_coding	Mical3	utr3	ENSMUSG00000051586	ProperStrand	104	chr5	108334240	108334341	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	2	-6.3753
chr9	48874853	48874943	protein_coding	Zw10	exon	ENSMUSG00000032264	ProperStrand	20	chr4	131908814	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.0012
chr11	69558119	69558142	protein_coding	Polr2a	exon	ENSMUSG00000005198	ProperStrand	200	chr9	120037973	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	2	-4.3980
chr7	133940999	133941201	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	chr2	158182155	158182200	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	8	-10.7366
chr18	24363855	24363872	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	7	-14.4816
chr13	104933780	104933903	protein_coding	2410002O22Rik	utr3	ENSMUSG00000021711	ProperStrand	6	chr8	13416897	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	3	-18.8469
chr2	181245883	181247266	protein_coding	Tpd52l2	intron	ENSMUSG00000000827	ProperStrand	20	chr7	117166760	117166859	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	9	-20.1863
chr7	52378398	52378457	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	chr7	118219702	118219740	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-1.0615
chr12	88814322	88814412	LTR	ORR1A4	MaLR	chr12ORR1A488814098	NonProperStrand	1	chr12	40242764	40242854	LTR	ORR1B1	MaLR	chr12ORR1B140242596	NonProperStrand	1	1	-inf
chr2	114747222	114747240	lincRNA	Gm13974	intron	ENSMUSG00000085222	NonProperStrand	1	chr11	83116228	83116310	protein_coding	Ap2b1	utr5	ENSMUSG00000035152	ProperStrand	60	1	-inf
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr2	129998657	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	3	-3.8707
chr13	91256912	91256931	protein_coding	Atg10	intron	ENSMUSG00000021619	ProperStrand	4	chr7	29136525	29136580	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-7.7378
chr13	104902156	104902176	protein_coding	Sgtb	intron	ENSMUSG00000042743	ProperStrand	60	chr15	79913294	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-6.1021
chr1	136324706	136324741	protein_coding	Adipor1	exon	ENSMUSG00000026457	ProperStrand	48	chr10	80785651	80785720	protein_coding	2510012J08Rik	exon	ENSMUSG00000034889	ProperStrand	16	1	-16.4603
chr1	20807463	20807894	protein_coding	Mcm3	exon	ENSMUSG00000041859	ProperStrand	142	chr19	5492747	5493177	protein_coding	Cfl1	exon	ENSMUSG00000056201	ProperStrand	88	1	-10.8144
chrX	47147264	47147299	protein_coding	Igsf1	exon	ENSMUSG00000031111	ProperStrand	1	chr7	109162285	109162361	protein_coding	Numa1	exon	ENSMUSG00000066306	ProperStrand	148	1	-inf
chr17	31012078	31012103	protein_coding	Dnahc8	utr3	ENSMUSG00000033826	ProperStrand	246	chr14	119693352	119693368	protein_coding	Hs6st3	intron	ENSMUSG00000053465	NonProperStrand	134	2	-14.0709
chr12	17552961	17553061	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr16	56035865	56035936	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	1	-1.2892
chr17	92586494	92586513	LTR	MTA_Mm-int	MaLR	chr17MTA_Mm-int92585983	ProperStrand	5	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-8.1751
chr10	127485177	127485316	protein_coding	Naca	exon	ENSMUSG00000061315	ProperStrand	50	chr6	125235854	125235871	protein_coding	Tuba3a	intron	ENSMUSG00000067702	NonProperStrand	8	1	-17.5475
chr17	32453268	32453284	protein_coding	Akap8	exon	ENSMUSG00000024045	ProperStrand	339	chr2	71248205	71248285	protein_coding	Hat1	exon	ENSMUSG00000027018	ProperStrand	53	3	-20.8777
chr4	132968727	132968788	protein_coding	Slc9a1	intron	ENSMUSG00000028854	ProperStrand	28	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.1386
chr9	123065930	123065946	protein_coding	Clec3b	exon	ENSMUSG00000025784	ProperStrand	58	chr7	149170855	149171340	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	1	-11.3159
chr2	152163523	152163539	protein_coding	Trib3	utr3	ENSMUSG00000032715	NonProperStrand	46	chr17	35089182	35089229	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-6.0071
chr6	52589247	52589327	snoRNA	ENSMUSG00000064792_SNORA32	.	ENSMUSG00000064792	ProperStrand	151	chr3	68889026	68889116	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-1.6992
chr18	33954818	33954896	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	chr11	58115972	58116006	tRNA	tRNA1911-LeuCAA	.	37011	ProperStrand	165	3	-4.9877
chr7	80644518	80644614	protein_coding	Chd2	exon	ENSMUSG00000078671	ProperStrand	69	chr19	8798517	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	5	-18.9181
chr9	121662196	121663364	protein_coding	Nktr	exon	ENSMUSG00000032525	ProperStrand	41	chr11	62416977	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-6.7976
chr5	14252800	14252816	protein_coding	Sema3e	utr3	ENSMUSG00000063531	ProperStrand	125	chr18	73693171	73693189	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-4.1136
chr14	27199812	27199828	antisense	4933413J09Rik	.	ENSMUSG00000021874	ProperStrand	51	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-11.0907
chr2	28368846	28368862	protein_coding	Ralgds	utr5	ENSMUSG00000026821	ProperStrand	14	chr9	64023228	64023277	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	1	-11.4022
chr2	26766780	26766838	snoRNA	ENSMUSG00000065258_SNORD24	.	ENSMUSG00000065258	ProperStrand	130	chr10	39978430	39978485	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-3.9777
chr9	83289034	83289124	protein_coding	Lca5	exon	ENSMUSG00000032258	ProperStrand	13	chr9	120039567	120039647	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-6.2868
chr18	35714268	35714292	lincRNA	Snhg4	intron	ENSMUSG00000090430	ProperStrand	270	chr6	148881568	148881625	protein_coding	Fam60a	exon	ENSMUSG00000039985	ProperStrand	68	1	-10.0466
chr13	112391959	112391976	processed_transcript	Gm15286	.	ENSMUSG00000086649	NonProperStrand	16	chr8	64017614	64028377	protein_coding	Palld	exon	ENSMUSG00000058056	NonProperStrand	125	1	-14.5230
chr17	24814560	24814798	protein_coding	Zfp598	exon	ENSMUSG00000041130	ProperStrand	26	chr19	9052174	9052458	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	2	-17.5946
chr17	57162751	57162787	protein_coding	Khsrp	exon	ENSMUSG00000007670	ProperStrand	353	chrX	34622906	34623024	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	3	-2.0737
chr14	13326355	13326372	protein_coding	Cadps	intron	ENSMUSG00000054423	ProperStrand	32	chr2	166890558	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-8.8194
chr19	4158614	4158671	protein_coding	Rps6kb2	exon	ENSMUSG00000024830	ProperStrand	6	chr16	23110968	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-10.1290
chr4	154345775	154345865	protein_coding	Pank4	intron	ENSMUSG00000029056	ProperStrand	15	chr5	144944155	144944243	protein_coding	Lmtk2	exon	ENSMUSG00000038970	ProperStrand	60	1	-16.1548
chr18	12172461	12172477	protein_coding	6030446N20Rik	intron	ENSMUSG00000049411	ProperStrand	235	chr17	33807032	33807049	protein_coding	Hnrnpm	utr5	ENSMUSG00000059208	ProperStrand	56	1	-10.7147
chr1	162967751	162967806	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	chr12	106269284	106269384	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-1.5082
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr14	76906347	76906437	protein_coding	Tsc22d1	exon	ENSMUSG00000022010	ProperStrand	86	1	-3.7834
chr12	33638594	33638614	lincRNA	4933406C10Rik	exon	ENSMUSG00000086543	ProperStrand	52	chr7	116664793	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	5	-12.6807
chr1	131592514	131592533	protein_coding	Thsd7b	intron	ENSMUSG00000042581	NonProperStrand	18	chr3	123210875	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-4.2354
chr2	93653943	93654043	protein_coding	Ext2	exon	ENSMUSG00000027198	ProperStrand	49	chrX	46482634	46482654	protein_coding	Enox2	intron	ENSMUSG00000031109	ProperStrand	29	2	-inf
chr4	32109695	32109711	protein_coding	Map3k7	utr3	ENSMUSG00000028284	ProperStrand	16	chr16	23110827	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-5.6614
chr2	34531870	34531909	protein_coding	Gapvd1	utr3	ENSMUSG00000026867	ProperStrand	31	chr9	118474209	118474230	protein_coding	Golga4	intron	ENSMUSG00000038708	ProperStrand	95	1	-13.7234
chr8	119983890	119983940	protein_coding	4933407C03Rik	utr3	ENSMUSG00000034390	ProperStrand	48	chr11	97642952	97643006	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.8600
chr14	27457704	27457750	protein_coding	Arf4	utr5	ENSMUSG00000021877	ProperStrand	14	chr3	157729109	157729125	protein_coding	Lrrc40	exon	ENSMUSG00000063052	NonProperStrand	26	1	-17.8919
chr7	97294678	97294697	protein_coding	Picalm	intron	ENSMUSG00000039361	NonProperStrand	5	chr1	162966812	162966850	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-11.3963
chr8	13282173	13282192	protein_coding	Dcun1d2	intron	ENSMUSG00000038506	NonProperStrand	5	chr16	23110840	23110873	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr10	61747552	61749111	protein_coding	Hk1	exon	ENSMUSG00000037012	ProperStrand	84	chr5	130300473	130300553	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-3.5405
chr6	71557525	71561523	protein_coding	Kdm3a	exon	ENSMUSG00000053470	ProperStrand	41	chr1	162967530	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.1870
chr18	42401683	42401727	protein_coding	Lars	exon	ENSMUSG00000024493	ProperStrand	69	chr11	63885336	63887052	protein_coding	Cox10	exon	ENSMUSG00000042148	NonProperStrand	187	1	-10.7518
chr12	101129637	101129727	protein_coding	Tdp1	exon	ENSMUSG00000021177	ProperStrand	23	chr15	79908937	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-7.3789
chr6	142449905	142453941	protein_coding	Ldhb	exon	ENSMUSG00000030246	ProperStrand	224	chr2	26768393	26768433	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	3	-7.8659
chr15	54697505	54697522	protein_coding	Enpp2	exon	ENSMUSG00000022425	ProperStrand	31	chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	1	-10.2357
chr10	86154397	86154888	protein_coding	Hsp90b1	exon	ENSMUSG00000020048	ProperStrand	396	chr7	117170642	117173235	protein_coding	Ipo7	exon	ENSMUSG00000066232	ProperStrand	2121	2	-4.6420
chr1	162965531	162965599	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr2	130103435	130103503	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	8	-3.5638
chr19	42092596	42092617	protein_coding	Ubtd1	intron	ENSMUSG00000025171	ProperStrand	14	chr17	24857740	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	5	-20.4672
chr3	152450607	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	chr12	110887828	110887895	snoRNA	ENSMUSG00000084549_SNORD113	.	ENSMUSG00000084549	ProperStrand	196	1	-6.4516
chr7	51828028	51828044	protein_coding	Napsa	exon	ENSMUSG00000002204	ProperStrand	88	chr4	131908363	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.9116
chr17	27699438	27699519	protein_coding	Hmga1	utr3	ENSMUSG00000046711	ProperStrand	180	chr19	8799838	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-2.9018
chr2	12941437	12941454	LTR	MTE2a	MaLR	chr2MTE2a12941159	NonProperStrand	42	chr11	72730046	72730062	protein_coding	Zzef1	exon	ENSMUSG00000055670	NonProperStrand	16	1	-16.7038
chr1	162968244	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	chr6	125136423	125136523	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	1	-0.8115
chr9	78023172	78023198	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr13	96374713	96374729	protein_coding	F2r	exon	ENSMUSG00000048376	NonProperStrand	88	1	-5.1303
chr15	102111204	102111255	protein_coding	Mfsd5	exon	ENSMUSG00000045665	ProperStrand	26	chr7	116663721	116663768	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	4	-13.2733
chr6	39369949	39370049	protein_coding	Mkrn1	exon	ENSMUSG00000029922	ProperStrand	177	chr7	140894150	140900620	protein_coding	Uros	utr5	ENSMUSG00000030979	ProperStrand	2	1	-19.7237
chr1	184403100	184403117	protein_coding	Capn2	exon	ENSMUSG00000026509	ProperStrand	6	chr4	131908687	131908750	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.3738
chr8	71702778	71702858	lincRNA	Gm7677	intron	ENSMUSG00000091162	NonProperStrand	1	chr8	121235912	121236002	protein_coding	Cdh13	intron	ENSMUSG00000031841	ProperStrand	60	1	-inf
chr12	88775083	88775113	protein_coding	Alkbh1	exon	ENSMUSG00000079036	ProperStrand	70	chr19	8963087	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	4	-7.7059
chr1	155132590	155132613	protein_coding	Lamc1	intron	ENSMUSG00000026478	ProperStrand	239	chr19	8799035	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-3.2106
chr10	41243049	41248478	protein_coding	Cd164	exon	ENSMUSG00000019818	ProperStrand	38	chr11	62416630	62416651	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	5	-inf
chr17	32951068	32951190	lincRNA	Gm16684	intron	ENSMUSG00000085948	ProperStrand	43	chr6	99314729	99314747	protein_coding	Eif4e3	intron	ENSMUSG00000030068	NonProperStrand	15	1	-16.8541
chr11	92960818	92960835	protein_coding	Car10	utr5	ENSMUSG00000056158	ProperStrand	25	chr1	162965530	162965577	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.9342
chr11	62417001	62417028	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr9	77808769	77808846	protein_coding	Elovl5	exon	ENSMUSG00000032349	ProperStrand	32	3	-20.2092
chr2	119773864	119773910	protein_coding	Mga	exon	ENSMUSG00000033943	ProperStrand	180	chr10	41644311	41644329	protein_coding	Armc2	exon	ENSMUSG00000071324	ProperStrand	281	1	-8.0215
chr2	156680826	156680846	protein_coding	Tgif2	utr3	ENSMUSG00000062175	ProperStrand	9	chr18	35716813	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-9.5374
chr11	5180669	5180685	protein_coding	Znrf3	utr3	ENSMUSG00000041961	NonProperStrand	210	chr15	7142730	7142759	protein_coding	Lifr	utr3	ENSMUSG00000054263	ProperStrand	64	1	-10.6710
chr17	48702295	48702385	LTR	RMER20A	ERVK	chr17RMER20A48702263	ProperStrand	1	chr19	10664403	10664483	protein_coding	Cybasc3	intron	ENSMUSG00000034445	ProperStrand	11	1	-inf
chr15	102086968	102087755	protein_coding	Rarg	utr5	ENSMUSG00000001288	ProperStrand	156	chr10	39978347	39978437	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-3.6390
chr19	9952676	9952846	protein_coding	Incenp	exon	ENSMUSG00000024660	ProperStrand	111	chr9	120039537	120039609	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.2439
chr19	10620238	10620328	protein_coding	Cpsf7	utr3	ENSMUSG00000034820	ProperStrand	66	chr12	88778631	88778711	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	2	-10.2241
chr6	99583139	99583156	protein_coding	Eif4e3	intron	ENSMUSG00000030068	NonProperStrand	15	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-9.7660
chrX	97690289	97690389	protein_coding	Igbp1	exon	ENSMUSG00000031221	ProperStrand	33	chr4	131908809	131908865	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.1302
chr3	30508798	30508878	protein_coding	Mynn	intron	ENSMUSG00000037730	ProperStrand	9	chr11	97643003	97643093	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-6.0986
chr11	68626568	68629526	protein_coding	Myh10	utr3	ENSMUSG00000020900	ProperStrand	91	chr10	110918591	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-4.7208
chr1	162133727	162133754	protein_coding	Cacybp	exon	ENSMUSG00000014226	ProperStrand	39	chr7	118219574	118219621	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	3	-11.8281
chr16	34986602	34986619	protein_coding	Mylk	exon	ENSMUSG00000022836	NonProperStrand	56	chr10	110918549	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-3.5758
chr1	134401005	134401021	protein_coding	Rbbp5	utr3	ENSMUSG00000026439	NonProperStrand	33	chr15	79908957	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-6.6538
chr7	133726414	133726504	protein_coding-noncoding	Cln3	utr3	ENSMUSG00000030720	NonProperStrand	1	chr7	133726256	133726336	protein_coding	Cln3	intron	ENSMUSG00000030720	NonProperStrand	2	1	-inf
chr11	84696170	84698717	protein_coding	Myo19	utr5	ENSMUSG00000020527	ProperStrand	82	chr1	72272839	72272929	snRNA	ENSMUSG00000075752_U2	.	ENSMUSG00000075752	ProperStrand	535	9	-inf
chr7	151765212	151765228	antisense	Gm10574	.	ENSMUSG00000073778	ProperStrand	357	chr17	35089195	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	2	-3.9350
chr1	37892124	37892141	protein_coding	Tsga10	exon	ENSMUSG00000060771	ProperStrand	79	chr11	62416950	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-5.5038
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	65118230	65118247	protein_coding	Crygc	exon	ENSMUSG00000025952	ProperStrand	12	1	-7.6663
chr4	100831481	100831651	protein_coding	Jak1	exon	ENSMUSG00000028530	ProperStrand	30	chr10	110918551	110918641	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-4.7609
chr7	80547651	80547667	protein_coding	Rgma	intron	ENSMUSG00000070509	ProperStrand	46	chr3	88624175	88624222	pseudogene	5830417I10Rik	.	ENSMUSG00000078684	ProperStrand	68	1	-13.5990
chr9	108269123	108270163	protein_coding	Usp4	exon	ENSMUSG00000032612	ProperStrand	29	chr17	13112504	13112563	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-6.0004
chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	chr4	40173641	40173658	protein_coding	Ddx58	exon	ENSMUSG00000040296	ProperStrand	18	1	-10.6160
chr17	34256404	34256494	protein_coding	Brd2	utr5	ENSMUSG00000024335	ProperStrand	69	chr4	131908814	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.0398
chr3	54611508	54611608	protein_coding	Rfxap	utr5	ENSMUSG00000036615	ProperStrand	4	chr19	8799868	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	4	-inf
chr16	93939640	93939656	protein_coding	Cldn14	intron	ENSMUSG00000047109	ProperStrand	10	chr12	17553045	17553069	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-8.6970
chr4	116827804	116827892	snoRNA	ENSMUSG00000064751_SNORD46	.	ENSMUSG00000064751	ProperStrand	132	chr11	98878362	98878452	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-4.7484
chr2	32563527	32563545	protein_coding	Cdk9	exon	ENSMUSG00000009555	NonProperStrand	49	chr1	185857228	185857244	protein_coding	1700056E22Rik	exon	ENSMUSG00000044854	ProperStrand	173	1	-11.5976
chr14	76245445	76246059	protein_coding	Tpt1	exon	ENSMUSG00000060126	ProperStrand	236	chr19	8799844	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-2.4338
chr19	10109605	10109635	protein_coding	Rab3il1	utr3	ENSMUSG00000024663	ProperStrand	14	chr1	24621336	24621417	protein_coding	Gm10925	utr3	ENSMUSG00000090378	ProperStrand	320	1	-12.9221
chr18	31942812	31942882	lincRNA	Gm16827	intron	ENSMUSG00000086768	NonProperStrand	1	chr11	102294590	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	1	-inf
chr5	118709439	118709455	protein_coding	2410131K14Rik	exon	ENSMUSG00000032840	ProperStrand	6	chr7	116663667	116663767	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-7.0045
chr19	41657295	41657395	protein_coding	Gm340	exon	ENSMUSG00000090673	ProperStrand	19	chr16	23111451	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.1411
chr2	90235295	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	27837820	27837836	protein_coding	Rfx3	utr3	ENSMUSG00000040929	ProperStrand	92	1	-3.6583
chr19	8799838	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	chr13	23399497	23399529	tRNA	tRNA98-ValCAC	.	1301080	ProperStrand	17	1	-7.4535
chr11	115883880	115883997	protein_coding	H3f3b	utr3	ENSMUSG00000016559	ProperStrand	76	chr7	52268137	52268593	protein_coding	Scaf1	exon	ENSMUSG00000038406	ProperStrand	81	4	-19.3984
chr5	129308507	129308524	protein_coding	Rimbp2	intron	ENSMUSG00000029420	NonProperStrand	19	chr4	147315854	147315896	protein_coding	2510039O18Rik	exon	ENSMUSG00000044496	ProperStrand	28	1	-17.0467
chr11	4820972	4820990	protein_coding	Thoc5	intron	ENSMUSG00000034274	ProperStrand	325	chr15	79908932	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-2.3533
chr7	19628033	19628799	protein_coding	Sympk	exon	ENSMUSG00000023118	ProperStrand	43	chr17	24665460	24665493	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-5.5902
chr3	108357255	108357345	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	chr4	132394382	132394462	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	1	-1.0378
chr10	6063958	6063978	protein_coding	Akap12	intron	ENSMUSG00000038587	ProperStrand	1008	chr12	88778631	88778699	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	3	-4.1449
chr5	108626832	108626922	protein_coding	Ccdc18	exon	ENSMUSG00000056531	ProperStrand	27	chr2	130101993	130102075	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-6.9376
chr9	78328344	78328444	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr1	155287312	155287354	snoRNA	ENSMUSG00000064435_SNORA4	.	ENSMUSG00000064435	ProperStrand	263	1	-3.5019
chr1	173341933	173341949	protein_coding	Usf1	utr5	ENSMUSG00000026641	NonProperStrand	144	chr2	130101241	130101307	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-4.8801
chr9	50490658	50490675	protein_coding	Dixdc1	exon	ENSMUSG00000032064	NonProperStrand	4	chr14	33005139	33005193	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-9.5527
chr7	28146782	28146798	protein_coding	Spnb4	exon	ENSMUSG00000011751	NonProperStrand	84	chr1	136195721	136195738	protein_coding	Ppfia4	intron	ENSMUSG00000026458	ProperStrand	45	1	-13.2192
chr8	97112720	97112736	protein_coding	Fam192a	exon	ENSMUSG00000031774	ProperStrand	11	chr6	71832629	71832664	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-9.0343
chr4	83102508	83102612	protein_coding	Psip1	utr3	ENSMUSG00000028484	ProperStrand	104	chr7	116663634	116663693	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.6231
chr11	19921201	19921249	protein_coding	Spred2	exon	ENSMUSG00000045671	ProperStrand	106	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	2	-9.5375
chr4	124736326	124736344	protein_coding	Dnali1	exon	ENSMUSG00000042707	ProperStrand	45	chr16	23110454	23110508	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.9643
chr12	103122735	103122779	protein_coding	Trip11	exon	ENSMUSG00000021188	ProperStrand	15	chr4	132394295	132394395	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	10	-inf
chr19	24169928	24170019	protein_coding	Tjp2	exon	ENSMUSG00000024812	ProperStrand	63	chr9	120037971	120038051	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	2	-7.6574
chr4	128676468	128679405	protein_coding	Ak2	exon	ENSMUSG00000028792	ProperStrand	43	chr5	30099854	30099873	protein_coding	Dnajb6	intron	ENSMUSG00000029131	NonProperStrand	3	1	-inf
chr11	50196082	50196183	protein_coding	Hnrnph1	exon	ENSMUSG00000007850	ProperStrand	49	chr4	40213977	40213997	protein_coding	Topors	intron	ENSMUSG00000036822	ProperStrand	40	1	-14.5468
chr7	54103058	54104370	protein_coding	Ldha	exon	ENSMUSG00000063229	ProperStrand	280	chr19	8798756	8798813	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-2.0265
chr11	100235474	100235508	protein_coding	Jup	exon	ENSMUSG00000001552	ProperStrand	123	chr19	8799826	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	2	-6.0846
chr1	38113619	38113693	protein_coding	Rev1	exon	ENSMUSG00000026082	ProperStrand	48	chr3	123210854	123210927	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	10	-23.1868
chr16	91044767	91044783	protein_coding	Gcfc1	utr5	ENSMUSG00000022974	ProperStrand	17	chr7	13516172	13516190	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	1	-11.2236
chr11	62418008	62418040	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr13	109461251	109461379	protein_coding	Gm9000	exon	ENSMUSG00000059751	ProperStrand	25	1	-10.7403
chr6	122678243	122678280	protein_coding	Slc2a3	utr3	ENSMUSG00000003153	ProperStrand	682	chr4	41150095	41150142	snoRNA	ENSMUSG00000089265_SNORD121A	.	ENSMUSG00000089265	ProperStrand	370	1	-4.8703
chr2	34502837	34502927	SINE	B4	B4	chr2B434502652	NonProperStrand	1	chr5	133110013	133110103	SINE	B4	B4	chr5B4133110007	NonProperStrand	1	1	-inf
chr5	46114388	46114459	protein_coding	Lcorl	intron	ENSMUSG00000015882	ProperStrand	15	chr16	23111448	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.5828
chr7	4099236	4099326	protein_coding	Leng8	utr3	ENSMUSG00000035545	ProperStrand	49	chr5	130300455	130300535	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.8625
chr15	79249380	79249419	protein_coding	Csnk1e	utr3	ENSMUSG00000022433	ProperStrand	59	chr10	23505559	23505621	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-7.5836
chr4	76614453	76614470	protein_coding	Ptprd	intron	ENSMUSG00000028399	ProperStrand	198	chr8	86553482	86553527	protein_coding	Palm3	exon	ENSMUSG00000047986	ProperStrand	3	1	-17.3904
chr15	94413267	94413295	protein_coding	Twf1	exon	ENSMUSG00000022451	ProperStrand	32	chr16	23111694	23111787	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.9714
chr1	181700803	181700981	protein_coding	Ahctf1	exon	ENSMUSG00000026491	ProperStrand	39	chr12	113973992	113974371	protein_coding	AW555464	exon	ENSMUSG00000072825	ProperStrand	96	1	-13.2369
chr17	83853882	83855419	protein_coding	Eml4	exon	ENSMUSG00000032624	ProperStrand	50	chr8	73419712	73419741	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-5.9076
chrX	148296919	148325697	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	chr1	162965978	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	5	-3.8377
mmu-miR-6240	4	26	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr8	74446729	74446745	protein_coding	Zfp617	intron	ENSMUSG00000066880	NonProperStrand	208	2	-5.9884
chr18	89063371	89063425	protein_coding	Socs6	intron	ENSMUSG00000056153	ProperStrand	12	chr1	162965978	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-11.0138
chr1	42755254	42755270	protein_coding	Pou3f3	exon	ENSMUSG00000045515	NonProperStrand	117	chr17	71990218	71990275	snoRNA	ENSMUSG00000092887_Snord53	.	ENSMUSG00000092887	ProperStrand	53	1	-12.2219
chr9	123065930	123065946	protein_coding	Clec3b	exon	ENSMUSG00000025784	ProperStrand	58	chr1	64782725	64782790	protein_coding	Fzd5	exon	ENSMUSG00000045005	ProperStrand	175	1	-11.2338
chr5	30951508	30951608	protein_coding	4930471M23Rik	intron	ENSMUSG00000029175	ProperStrand	67	chr19	8799831	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-4.7340
chr9	120039245	120039472	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	chr7	117189957	117190059	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-1.1591
chr4	43505700	43505790	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr4	53873607	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	3	-1.1148
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr6	51872316	51872332	protein_coding	Skap2	exon	ENSMUSG00000059182	NonProperStrand	34	1	-8.8799
chr7	133938792	133940931	protein_coding	Aldoa	utr3	ENSMUSG00000030695	ProperStrand	721	chr5	108334226	108336484	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	10	-13.8129
chr6	141607833	141607850	protein_coding	Slco1b2	intron	ENSMUSG00000030236	NonProperStrand	14	chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-9.3927
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr3	153285141	153285159	protein_coding	St6galnac3	intron	ENSMUSG00000052544	NonProperStrand	11	1	-7.8469
chr2	32006647	32006694	protein_coding	Prrc2b	utr5	ENSMUSG00000039262	ProperStrand	344	chr2	26493360	26493414	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-1.8576
chr2	18146932	18146980	protein_coding	Dnajc1	intron	ENSMUSG00000026740	ProperStrand	10	chr1	89673607	89673697	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-6.7666
chr3	26220145	26220161	LINE	Lx4B	L1	chr3Lx4B26219849	NonProperStrand	13	chr11	34107990	34108007	protein_coding	Foxi1	exon	ENSMUSG00000047861	ProperStrand	1	1	-inf
chr16	15629558	15629658	protein_coding	Mcm4	exon	ENSMUSG00000022673	ProperStrand	51	chr10	23505152	23505189	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.4625
chr7	95266597	95266613	protein_coding	Grm5	intron	ENSMUSG00000049583	NonProperStrand	145	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.7778
chr19	42110700	42110716	protein_coding	Ankrd2	intron	ENSMUSG00000025172	NonProperStrand	5	chr10	23505152	23505215	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-5.7809
chr12	76836573	76836589	protein_coding	Sgpp1	utr5	ENSMUSG00000021054	NonProperStrand	2	chr1	162966812	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	2	-inf
chr10	109640050	109640066	SINE	RSINE1	B4	chr10RSINE1109639979	ProperStrand	51	chr3	85941923	85941983	protein_coding	Rps3a	exon	ENSMUSG00000028081	ProperStrand	177	1	-11.4706
chr8	26937748	26937764	protein_coding	Ash2l	exon	ENSMUSG00000031575	NonProperStrand	1	chr8	74843863	74843946	protein_coding	Klf2	exon	ENSMUSG00000055148	ProperStrand	82	1	-inf
chr2	23020306	23020406	protein_coding	Yme1l1	intron	ENSMUSG00000026775	ProperStrand	20	chr10	23505151	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.0137
chr13	79659338	79659354	LTR	RodERV21-int	ERV1	chr13RodERV21-int79658190	ProperStrand	43	chr2	70927899	70927915	protein_coding	Dcaf17	exon	ENSMUSG00000041966	NonProperStrand	89	1	-13.1983
chr4	148411393	148411416	protein_coding	Pex14	intron	ENSMUSG00000028975	ProperStrand	16	chr11	6428035	6428166	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.7293
chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	chr12	17552949	17552995	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	2	-1.2145
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr12	119301895	119301912	protein_coding	Dnahc11	intron	ENSMUSG00000018581	ProperStrand	65	1	-7.6354
chr2	57220620	57220675	protein_coding	Gpd2	utr3	ENSMUSG00000026827	ProperStrand	93	chr5	130295460	130295510	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-4.4047
chr2	127416801	127416901	protein_coding	Mrps5	intron	ENSMUSG00000027374	ProperStrand	84	chr7	29136600	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-3.3258
chr11	60966574	60966592	protein_coding	Usp22	utr3	ENSMUSG00000042506	ProperStrand	75	chr18	33954923	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-3.0997
chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	chrX	84483704	84483730	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-3.8196
chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	chr10	23506288	23506348	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-2.1303
chr9	21174526	21174544	protein_coding	Ilf3	intron	ENSMUSG00000032178	NonProperStrand	8	chr13	100185104	100185175	protein_coding	Mrps27	utr3	ENSMUSG00000041632	ProperStrand	21	1	-18.3903
chr4	151432496	151432526	protein_coding	Nol9	exon	ENSMUSG00000028948	ProperStrand	93	chr4	116827120	116827173	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	2	-10.0127
chr11	6780193	6780224	LTR	RLTR12B	ERVK	chr11RLTR12B6779991	NonProperStrand	3	chr11	62418045	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	3	-inf
chr17	34733220	34733310	protein_coding	Pbx2	utr3	ENSMUSG00000034673	ProperStrand	19	chr4	131865381	131865461	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-6.2464
chr5	143722629	143722671	protein_coding	Fscn1	exon	ENSMUSG00000029581	ProperStrand	200	chr4	131866204	131866292	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-1.6125
chr17	5821890	5821917	LTR	MLT2D	ERVL	chr17MLT2D5821859	ProperStrand	4	chr17	24857781	24857851	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	4	-inf
chr9	78023109	78023202	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	5	-1.1603
chr5	31379808	31379869	protein_coding	Cad	exon	ENSMUSG00000013629	ProperStrand	260	chr18	73693169	73693186	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-2.7804
chr5	77385639	77385729	protein_coding	Paics	exon	ENSMUSG00000029247	ProperStrand	78	chr2	144087342	144087422	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	5	-inf
chr11	98065302	98065370	protein_coding	Cdk12	exon	ENSMUSG00000003119	ProperStrand	50	chr9	15119646	15119736	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.9502
chr17	56402191	56402281	protein_coding	Fem1a	utr3	ENSMUSG00000043683	ProperStrand	11	chr12	92811888	92811957	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	1	-12.0318
chr5	137960199	137968592	protein_coding	Gigyf1	utr3	ENSMUSG00000029714	ProperStrand	49	chr16	23110829	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-1.9572
chr2	154386056	154386119	protein_coding	E2f1	utr3	ENSMUSG00000027490	ProperStrand	28	chr3	88497865	88497955	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-8.9916
chrX	106825225	106825305	LINE	Lx6	L1	chrXLx6106824971	ProperStrand	1	chrX	106825354	106825444	LINE	Lx6	L1	chrXLx6106825358	ProperStrand	1	1	-inf
chr11	4820972	4820990	protein_coding	Thoc5	intron	ENSMUSG00000034274	ProperStrand	325	chr5	115254886	115254920	protein_coding	Ankrd13a	utr3	ENSMUSG00000041870	ProperStrand	22	1	-11.9598
chr2	25920077	25920093	protein_coding	Nacc2	exon	ENSMUSG00000026932	NonProperStrand	15	chr7	13846274	13846290	protein_coding	6330408A02Rik	utr3	ENSMUSG00000070814	ProperStrand	10	1	-19.9099
chr8	71637364	71637401	protein_coding	Atp6v1b2	utr3	ENSMUSG00000006273	ProperStrand	29	chr7	148634701	148634791	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	4	-16.7684
chr5	35925731	35925747	lincRNA	4931431C16Rik	exon	ENSMUSG00000055061	ProperStrand	28	chr11	62416951	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-7.5618
chr5	115461172	115461272	protein_coding	Sppl3	utr5	ENSMUSG00000029550	ProperStrand	33	chr9	64143802	64143873	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-8.9731
chr18	47184003	47184103	protein_coding	Commd10	intron	ENSMUSG00000042705	ProperStrand	6	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.7876
chr5	124821333	124821404	protein_coding	Sbno1	utr3	ENSMUSG00000038095	ProperStrand	134	chr7	117189984	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-1.9501
chr4	123079125	123191126	protein_coding	Macf1	exon	ENSMUSG00000028649	ProperStrand	320	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	3	-2.9953
chr19	46451407	46452460	protein_coding	Actr1a	utr3	ENSMUSG00000025228	ProperStrand	27	chr16	23110852	23110961	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.3280
chr6	131330345	131330425	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	ProperStrand	408	chr14	33005139	33005229	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-0.8897
chr1	75484537	75484553	protein_coding	Obsl1	exon	ENSMUSG00000026211	NonProperStrand	192	chr9	15118296	15118318	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-1.5129
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr9	44205327	44205344	protein_coding	Slc37a4	utr5	ENSMUSG00000032114	ProperStrand	23	1	-10.8427
chrX	16709511	16709573	protein_coding	Efhc2	intron	ENSMUSG00000025038	ProperStrand	3	chr11	97642952	97643009	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-8.5513
chr19	5796523	5796637	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr1	39605591	39605618	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-1.9548
chr6	54379743	54379760	lincRNA	9130019P16Rik	exon	ENSMUSG00000073067	ProperStrand	255	chr2	130103751	130103798	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-5.6096
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr9	120865049	120866247	protein_coding	Ctnnb1	exon	ENSMUSG00000006932	ProperStrand	214	1	-5.4644
chr11	100181356	100182879	protein_coding	Eif1	utr5	ENSMUSG00000035530	ProperStrand	115	chr16	23110949	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-1.6361
chr8	46334013	46334106	protein_coding	F11	exon	ENSMUSG00000031645	ProperStrand	21	chr1	88252836	88252902	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	2	-13.9453
chr3	151952066	151953459	protein_coding	Fam73a	exon	ENSMUSG00000054942	ProperStrand	34	chr19	60282353	60282374	protein_coding	D19Ertd737e	intron	ENSMUSG00000057858	NonProperStrand	2	1	-20.4747
chr10	117127517	117127598	protein_coding	Mdm2	exon	ENSMUSG00000020184	ProperStrand	17	chr5	121655063	121655127	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-10.1326
chr11	46014373	46020891	protein_coding	Cyfip2	exon	ENSMUSG00000020340	NonProperStrand	3	chr16	23111373	23111494	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-6.9982
chr14	49792862	49792952	protein_coding	Naa30	exon	ENSMUSG00000036282	ProperStrand	13	chr16	23111385	23111465	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.8569
chr17	39985193	39985762	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr8	98269959	98270088	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	17	-16.1670
chr11	97568156	97568207	protein_coding	Psmb3	exon	ENSMUSG00000069744	ProperStrand	26	chr2	26494762	26494826	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-7.7912
chr3	67279850	67279957	protein_coding	Gfm1	utr3	ENSMUSG00000027774	ProperStrand	31	chr1	162965576	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-7.5364
chr9	56983316	56983372	protein_coding	Man2c1	exon	ENSMUSG00000032295	ProperStrand	13	chr16	23110986	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-4.2316
chr9	67771626	67773589	protein_coding	Vps13c	exon	ENSMUSG00000035284	ProperStrand	69	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-7.8999
chr6	14282721	14282739	LTR	MTE-int	MaLR	chr6MTE-int14282565	NonProperStrand	1	chr14	76247742	76247765	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-inf
chr15	77798912	77799012	protein_coding	Eif3d	utr5	ENSMUSG00000016554	ProperStrand	69	chr16	23111448	23111505	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.0727
chr9	63868722	63868738	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	chr8	75019394	75019456	protein_coding	Med26	exon	ENSMUSG00000045248	ProperStrand	45	1	-9.1646
chr2	164709669	164709707	protein_coding	Pcif1	exon	ENSMUSG00000039849	ProperStrand	22	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-7.9529
chr5	136707645	136707662	protein_coding	Sh2b2	exon	ENSMUSG00000005057	NonProperStrand	101	chr8	84531362	84531379	protein_coding	Inpp4b	intron	ENSMUSG00000037940	NonProperStrand	33	1	-13.4742
chr9	21823257	21823273	protein_coding	Elavl3	exon	ENSMUSG00000003410	NonProperStrand	137	chr11	62416598	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-3.5997
chr11	78037874	78037964	protein_coding	Supt6h	exon	ENSMUSG00000002052	ProperStrand	119	chr7	148634706	148634786	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-2.7409
chr5	123622050	123622066	protein_coding	Hpd	exon	ENSMUSG00000029445	ProperStrand	254	chr18	73693110	73693187	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	3	-7.2473
chr12	88223183	88223250	protein_coding	6430527G18Rik	exon	ENSMUSG00000034168	ProperStrand	46	chr10	110918643	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-3.9429
chrX	93136011	93136027	protein_coding	Las1l	exon	ENSMUSG00000057421	ProperStrand	248	chr10	107800719	107800786	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	1	-5.2723
chr17	12875768	12875858	protein_coding	Igf2r	utr3	ENSMUSG00000023830	ProperStrand	151	chr3	123210899	123210979	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-0.7763
chr2	156754500	156754590	protein_coding	Ndrg3	exon	ENSMUSG00000027634	ProperStrand	16	chr11	68886962	68887052	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-6.7426
chr7	148634701	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	chr15	98356818	98356913	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	10	-7.2569
chr17	24306256	24306302	protein_coding	Atp6v0c	utr5	ENSMUSG00000024121	ProperStrand	75	chr4	131908809	131908893	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.9361
chr5	31918529	31918609	protein_coding-noncoding	Mrpl33	utr5	ENSMUSG00000029142	ProperStrand	4	chr5	31918780	31918870	protein_coding	Mrpl33	exon	ENSMUSG00000029142	ProperStrand	3	1	-inf
chr14	65357474	65361229	protein_coding	Kif13b	exon	ENSMUSG00000060012	ProperStrand	37	chr4	131908814	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.9439
chr10	78041850	78042209	protein_coding	Ilvbl	exon	ENSMUSG00000032763	NonProperStrand	1	chr18	35714144	35714244	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	NonProperStrand	47	1	-inf
chr4	129991263	129991286	protein_coding	Fabp3	exon	ENSMUSG00000028773	ProperStrand	93	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-7.3055
chr9	37457060	37462007	protein_coding	Tbrg1	exon	ENSMUSG00000011114	ProperStrand	56	chr16	23110903	23110999	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-2.5318
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr9	48801088	48801172	protein_coding	Usp28	intron	ENSMUSG00000032267	ProperStrand	63	1	-5.8077
chr7	105241581	105241629	protein_coding	Myo7a	intron	ENSMUSG00000030761	NonProperStrand	33	chr10	60692417	60692433	protein_coding	Adamts14	exon	ENSMUSG00000059901	NonProperStrand	127	1	-13.0154
chrX	12869010	12869078	protein_coding	Ddx3x	utr3	ENSMUSG00000000787	ProperStrand	67	chr12	110889638	110889667	snoRNA	ENSMUSG00000064496_SNORD113	.	ENSMUSG00000064496	ProperStrand	37	1	-14.0613
chr9	64024929	64024998	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	chr2	26494708	26494809	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	6	-3.9070
chr11	102792474	102792493	lincRNA	Gm17536	intron	ENSMUSG00000091056	ProperStrand	15	chr2	153598791	153598816	protein_coding	Mapre1	utr3	ENSMUSG00000027479	ProperStrand	19	1	-18.9281
chr1	23853101	23853145	protein_coding	Smap1	utr3	ENSMUSG00000026155	ProperStrand	10	chr11	6428035	6428085	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	4	-25.2026
chr12	110888850	110888909	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr3	95980375	95980412	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-2.4790
chr7	151685494	151685592	protein_coding	Ppfia1	intron	ENSMUSG00000037519	ProperStrand	32	chr7	67123728	67123759	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	4	-20.6891
chr11	74495739	74495780	protein_coding	Pafah1b1	exon	ENSMUSG00000020745	ProperStrand	20	chr4	131865381	131865471	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-6.1433
chr11	76593511	76603608	protein_coding	Cpd	utr3	ENSMUSG00000020841	ProperStrand	46	chr16	23110828	23110938	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-2.1253
chr10	6063960	6063978	protein_coding	Akap12	intron	ENSMUSG00000038587	ProperStrand	1008	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-1.4753
chr2	29779125	29779150	protein_coding	Odf2	exon	ENSMUSG00000026790	ProperStrand	58	chr4	46839259	46839276	protein_coding	Gabbr2	intron	ENSMUSG00000039809	NonProperStrand	14	1	-16.4110
chr9	109012045	109012127	protein_coding	Plxnb1	exon	ENSMUSG00000053646	ProperStrand	25	chr18	35716825	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-9.2831
chr18	48207380	48207480	protein_coding	Gm5506	exon	ENSMUSG00000059040	ProperStrand	105	chr1	162968262	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-5.7139
chr17	45706624	45706654	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr11	33649365	33649382	protein_coding	Kcnip1	intron	ENSMUSG00000053519	ProperStrand	45	2	-11.7320
chr7	134678388	134681517	protein_coding	Srcap	exon	ENSMUSG00000053877	ProperStrand	69	chr5	121655029	121655109	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.4890
chr17	68375417	68375434	DNA	Tigger7	MER2_type	chr17Tigger768375227	ProperStrand	2	chr2	90235285	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	1	-11.8384
chr18	10052131	10052155	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr16	23110528	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	5	-1.1415
chr18	61715365	61715387	protein_coding	Csnk1a1	utr5	ENSMUSG00000024576	NonProperStrand	35	chr16	23111455	23111500	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.0755
chr15	96826224	96826256	protein_coding	Slc38a4	utr3	ENSMUSG00000022464	ProperStrand	139	chr1	162966215	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	3	-13.6125
chr3	130938562	130943888	protein_coding	Hadh	exon	ENSMUSG00000027984	ProperStrand	35	chr3	89750435	89750451	protein_coding	Atp8b2	exon	ENSMUSG00000060671	ProperStrand	140	1	-12.7015
chr10	120709244	120712786	protein_coding	Tbc1d30	exon	ENSMUSG00000052302	ProperStrand	233	chr1	88252886	88252902	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-4.0139
chr5	108336363	108336491	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	chr7	118219574	118219740	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	19	-3.0405
chr14	56490489	56490589	protein_coding	Nynrin	exon	ENSMUSG00000075592	ProperStrand	76	chr19	8799371	8799433	snoRNA	ENSMUSG00000065280_SNORD28	.	ENSMUSG00000065280	ProperStrand	269	1	-9.8309
chr4	140121137	140121154	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	chr16	23111372	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	6	-4.5523
chr11	120238024	120238116	protein_coding	2310003H01Rik	exon	ENSMUSG00000025384	ProperStrand	6	chr16	23110986	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-10.1290
chr6	122678203	122678295	protein_coding	Slc2a3	utr3	ENSMUSG00000003153	ProperStrand	682	chr16	57391760	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	1	-3.1152
chr4	42930232	42930249	protein_coding	N28178	utr5	ENSMUSG00000036062	NonProperStrand	1	chr16	23110902	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr1	71644007	71697199	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr18	35716726	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	10	-1.2353
chr12	50485931	50485947	protein_coding	Foxg1	exon	ENSMUSG00000020950	NonProperStrand	26	chrX	148369061	148369117	protein_coding	Huwe1	utr3	ENSMUSG00000025261	ProperStrand	501	1	-10.7540
chr19	32199770	32199790	protein_coding	Sgms1	exon	ENSMUSG00000040451	ProperStrand	10	chr7	116663653	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-5.9268
chr1	190267301	190267317	protein_coding	Ush2a	exon	ENSMUSG00000026609	NonProperStrand	60	chr17	39985621	39985670	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-5.9321
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr8	123094873	123094915	protein_coding	Gse1	exon	ENSMUSG00000031822	ProperStrand	97	1	-5.9759
chr10	94151578	94151595	protein_coding	Ccdc41	utr5	ENSMUSG00000020024	NonProperStrand	34	chr1	162965531	162965582	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.3385
chr3	97817679	97851651	protein_coding	Notch2	exon	ENSMUSG00000027878	ProperStrand	86	chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	1	-8.1089
chr15	80782640	80782696	protein_coding	Adsl	exon	ENSMUSG00000022407	ProperStrand	11	chr9	68661667	68661689	protein_coding	Rora	intron	ENSMUSG00000032238	NonProperStrand	30	1	-18.1642
chr8	72632126	72632142	protein_coding	Ncan	exon	ENSMUSG00000002341	NonProperStrand	6	chr4	131908685	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.3738
chr5	45896027	45897453	protein_coding	Lap3	exon	ENSMUSG00000039682	ProperStrand	87	chr9	15118323	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-2.7986
chr6	122266585	122266654	protein_coding	M6pr	utr3	ENSMUSG00000007458	ProperStrand	56	chr9	15119690	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.7499
chr3	55987231	55987249	protein_coding	Nbea	utr5	ENSMUSG00000027799	NonProperStrand	115	chr7	134942921	134942988	protein_coding	Setd1a	exon	ENSMUSG00000042308	ProperStrand	58	2	-18.3975
chr11	116711474	116711521	protein_coding	Srsf2	utr3	ENSMUSG00000034120	ProperStrand	132	chr8	72433406	72433464	protein_coding	Gatad2a	utr3	ENSMUSG00000036180	ProperStrand	112	1	-10.4769
chr14	62969286	62972440	protein_coding	Rnaseh2b	exon	ENSMUSG00000021932	ProperStrand	4	chr6	50320283	50320318	protein_coding	Osbpl3	utr5	ENSMUSG00000029822	ProperStrand	34	1	-18.8058
chr3	55888495	55888516	protein_coding	Nbea	intron	ENSMUSG00000027799	ProperStrand	53	chr15	82980125	82980225	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	5	-inf
chr2	90235315	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	97155314	97155331	protein_coding	Uba3	exon	ENSMUSG00000030061	ProperStrand	37	1	-5.3993
chr7	95266597	95266613	protein_coding	Grm5	intron	ENSMUSG00000049583	NonProperStrand	145	chr18	75161533	75161555	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-5.4654
chr10	93050837	93052300	protein_coding	Snrpf	exon	ENSMUSG00000020018	ProperStrand	4	chr7	4745189	4745211	protein_coding	Rpl28	exon	ENSMUSG00000030432	ProperStrand	220	1	-16.3873
chr12	84983593	84983627	protein_coding	Rbm25	exon	ENSMUSG00000010608	ProperStrand	42	chr11	117018669	117018759	protein_coding	Sec14l1	utr3	ENSMUSG00000020823	ProperStrand	71	1	-13.6949
chr7	28790526	28790555	SINE	B1_Mur2	Alu	chr7B1_Mur228790413	ProperStrand	1	chr16	23110965	23110988	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr11	69819006	69819032	protein_coding	Dvl2	exon	ENSMUSG00000020888	ProperStrand	94	chr4	129742112	129742128	protein_coding	Col16a1	exon	ENSMUSG00000040690	ProperStrand	21	1	-14.5332
chr2	76471660	76471676	protein_coding	Prkra	exon	ENSMUSG00000002731	NonProperStrand	65	chr8	86090668	86090693	protein_coding	Ndufb7	utr5	ENSMUSG00000033938	ProperStrand	7	1	-17.6356
chr7	149236032	149236093	protein_coding	Mob2	intron	ENSMUSG00000025147	ProperStrand	20	chr5	121655035	121655125	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.8755
chr10	122467348	122468111	protein_coding	Mon2	exon	ENSMUSG00000034602	NonProperStrand	5	chr1	91358413	91358430	protein_coding	Agap1	intron	ENSMUSG00000055013	ProperStrand	229	1	-15.7745
chr5	143732227	143732317	protein_coding	Fscn1	exon	ENSMUSG00000029581	ProperStrand	200	chr7	116663634	116663714	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-0.7618
chr15	81514353	81514369	protein_coding-noncoding	Chadl	utr3	ENSMUSG00000063765	ProperStrand	1	chr11	98878344	98878371	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-inf
chr9	50510066	50511237	protein_coding	Dixdc1	exon	ENSMUSG00000032064	ProperStrand	8	chr2	26494708	26494759	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-7.0621
chr1	105594175	105594265	LINE	L1VL4	L1	chr1L1VL4105594156	NonProperStrand	1	chr1	105594054	105594134	LTR	RMER3D-int	ERVK	chr1RMER3D-int105594022	NonProperStrand	1	1	-inf
chr4	141145289	141145311	protein_coding	Fblim1	exon	ENSMUSG00000006219	ProperStrand	26	chr1	88252836	88252864	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-8.3153
chr2	32881629	32881645	protein_coding	Garnl3	exon	ENSMUSG00000038860	NonProperStrand	54	chr4	149012351	149012380	protein_coding	Clstn1	exon	ENSMUSG00000039953	ProperStrand	173	1	-11.4011
chr16	72800514	72800532	protein_coding	Robo1	intron	ENSMUSG00000022883	NonProperStrand	188	chr4	68423440	68423456	protein_coding	Dbc1	exon	ENSMUSG00000028351	ProperStrand	78	1	-10.4948
chr1	169156586	169157886	protein_coding	Uck2	exon	ENSMUSG00000026558	ProperStrand	45	chr16	56035889	56035969	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	3	-21.3250
chr6	144349712	144349730	protein_coding	Sox5	intron	ENSMUSG00000041540	ProperStrand	34	chr4	130305550	130305619	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	1	-11.0554
chr6	29710020	29710084	protein_coding	Smo	exon	ENSMUSG00000001761	ProperStrand	10	chr16	23110966	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.7978
chr7	148587959	148588108	protein_coding	Taldo1	exon	ENSMUSG00000025503	ProperStrand	28	chr9	15119650	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	6	-18.9301
chr10	77512811	77512891	protein_coding	Dnmt3l	utr5	ENSMUSG00000000730	ProperStrand	37	chr7	29136556	29136646	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.2150
chr9	20459955	20459979	protein_coding	Pin1	exon	ENSMUSG00000032171	ProperStrand	17	chr3	123210854	123210967	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-4.3464
chr9	41900395	41900495	protein_coding	Sorl1	exon	ENSMUSG00000049313	ProperStrand	112	chr19	8949723	8949765	protein_coding	Ubxn1	exon	ENSMUSG00000071655	ProperStrand	68	5	-19.6879
chr4	126703470	126704041	protein_coding	Sfpq	exon	ENSMUSG00000028820	ProperStrand	340	chr7	19543847	19543863	protein_coding	Nova2	exon	ENSMUSG00000030411	ProperStrand	23	1	-11.7787
chr7	119934428	119934449	protein_coding	Tead1	intron	ENSMUSG00000055320	ProperStrand	217	chr5	130300460	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-1.4079
chr17	45562813	45562855	protein_coding	Cdc5l	exon	ENSMUSG00000023932	ProperStrand	59	chr15	98350200	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-4.7929
chr4	155548095	155548156	protein_coding	Agrn	exon	ENSMUSG00000041936	ProperStrand	175	chr2	26494784	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-2.5774
chr12	85943607	85943670	protein_coding	Abcd4	utr3	ENSMUSG00000021240	ProperStrand	6	chr5	74489564	74489654	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-8.4105
chr1	89578277	89580342	protein_coding	Inpp5d	exon	ENSMUSG00000026288	ProperStrand	75	chr16	23110532	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.0895
chr1	122237194	122237211	protein_coding	C1ql2	utr5	ENSMUSG00000036907	NonProperStrand	9	chr2	118966015	118968418	protein_coding	Fam82a2	exon	ENSMUSG00000070730	ProperStrand	11	3	-19.5406
chr1	82439487	82439577	protein_coding	Rhbdd1	utr3	ENSMUSG00000026142	ProperStrand	22	chr10	23505191	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	6	-16.3718
chr12	82317769	82317785	protein_coding	Slc8a3	exon	ENSMUSG00000079055	ProperStrand	126	chr8	73419716	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-1.8704
chr6	17237062	17237080	protein_coding	Cav2	utr3	ENSMUSG00000000058	ProperStrand	8	chr2	26494708	26494759	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	3	-16.4315
chr1	133141328	133141345	protein_coding	Rassf5	exon	ENSMUSG00000026430	ProperStrand	73	chr16	23111689	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-6.4988
chr4	43505692	43505782	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr5	31472587	31472629	protein_coding	Gtf3c2	exon	ENSMUSG00000029144	ProperStrand	22	1	-4.9644
chr5	125505448	125505548	protein_coding	Ncor2	exon	ENSMUSG00000029478	ProperStrand	377	chr12	60774054	60774107	snoRNA	ENSMUSG00000077603_SNORA3	.	ENSMUSG00000077603	ProperStrand	185	1	-7.3844
chr11	62416575	62418036	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr7	52382234	52382314	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	4	-13.0317
chr5	35924046	35924062	lincRNA	4931431C16Rik	exon	ENSMUSG00000055061	ProperStrand	28	chr4	116827032	116827333	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	1	-11.8990
chr17	39979942	39979992	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr19	26785149	26785165	protein_coding	Smarca2	exon	ENSMUSG00000024921	ProperStrand	38	1	-8.1371
chr7	73926677	73926696	protein_coding	Lass3	exon	ENSMUSG00000030510	ProperStrand	4	chr7	116663710	116663755	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-7.9103
chr2	76686691	76686881	protein_coding	Ttn	exon	ENSMUSG00000051747	NonProperStrand	27	chr17	26360446	26360503	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	1	-11.6438
chr4	131825994	131826125	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	chr17	24857794	24857853	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	5	-1.4397
chr15	36528717	36528743	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr2	173922497	173922513	protein_coding	Stx16	exon	ENSMUSG00000027522	NonProperStrand	2	1	-15.3718
chr14	8726297	8726396	protein_coding	Flnb	exon	ENSMUSG00000025278	ProperStrand	124	chr8	32260335	32260373	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-3.2725
chr17	27070133	27070149	protein_coding	Phf1	utr5	ENSMUSG00000024193	NonProperStrand	6	chr5	108336374	108336410	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-9.5743
chr7	17434192	17434393	protein_coding	Prkd2	exon	ENSMUSG00000041187	ProperStrand	9	chr8	113362432	113362452	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	1	-13.1499
chr9	44446633	44446678	protein_coding	Ddx6	utr3	ENSMUSG00000032097	ProperStrand	59	chr18	33954825	33954915	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-6.0170
chr8	127449340	127449440	protein_coding	Egln1	intron	ENSMUSG00000031987	ProperStrand	13	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.2243
chr4	43015786	43015858	protein_coding	Fancg	utr3	ENSMUSG00000028453	ProperStrand	13	chr10	23505188	23505278	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-9.6524
chr4	149021501	149021570	protein_coding	Clstn1	exon	ENSMUSG00000039953	ProperStrand	173	chr11	62416623	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	3	-7.9979
chr5	122887111	122887132	protein_coding	Anapc7	intron	ENSMUSG00000029466	ProperStrand	11	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-11.1946
chr12	77900029	77900095	protein_coding	Rab15	utr3	ENSMUSG00000021062	ProperStrand	8	chr4	131865855	131865944	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.4974
chr6	47480418	47480518	protein_coding	Ezh2	utr3	ENSMUSG00000029687	ProperStrand	40	chr16	23110454	23110526	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-8.0756
chr19	8800355	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	chr12	106269284	106269488	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	27	-0.7160
chr19	46139011	46139049	protein_coding	Pprc1	exon	ENSMUSG00000055491	ProperStrand	143	chr15	98356776	98356811	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	1	-6.0344
chr1	34285762	34285862	protein_coding	Dst	exon	ENSMUSG00000026131	ProperStrand	461	chr19	8799833	8799897	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-1.3858
chr1	173348666	173348688	protein_coding	Usf1	utr3	ENSMUSG00000026641	ProperStrand	30	chr9	120038576	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.3284
chr15	99534250	99538341	protein_coding	Smarcd1	exon	ENSMUSG00000023018	ProperStrand	43	chr16	23110917	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.3514
chr15	20927152	20927242	LINE	L1Md_F3	L1	chr15L1Md_F320926677	ProperStrand	1	chr15	20927419	20927509	LINE	Lx3B	L1	chr15Lx3B20927388	ProperStrand	1	1	-inf
chr2	26493428	26493518	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr5	136707644	136707662	protein_coding	Sh2b2	exon	ENSMUSG00000005057	NonProperStrand	101	1	-5.1759
chr10	74526332	74526422	protein_coding	Bcr	intron	ENSMUSG00000009681	NonProperStrand	23	chr17	23873761	23873841	protein_coding	Paqr4	utr3	ENSMUSG00000023909	ProperStrand	20	1	-17.2329
chr11	19963018	19963092	protein_coding	Actr2	utr3	ENSMUSG00000020152	ProperStrand	72	chr11	115022876	115022976	protein_coding	Rab37	utr3	ENSMUSG00000020732	ProperStrand	1	1	-inf
chr6	72180855	72180872	protein_coding	Atoh8	intron	ENSMUSG00000037621	NonProperStrand	61	chr11	6428107	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.1624
chr17	46541119	46541153	protein_coding	Zfp318	intron	ENSMUSG00000015597	ProperStrand	44	chr17	78637216	78679380	protein_coding	Crim1	exon	ENSMUSG00000024074	ProperStrand	19	1	-16.2866
chr14	87659491	87659512	LTR	MTEa	MaLR	chr14MTEa87659331	NonProperStrand	83	chr7	117190018	117190063	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.7523
chr8	114009031	114009277	protein_coding	Wdr59	exon	ENSMUSG00000031959	ProperStrand	18	chr5	74489642	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	2	-10.0017
chr18	36903927	36904089	protein_coding	Ndufa2	exon	ENSMUSG00000014294	ProperStrand	4	chr6	87769189	87769558	protein_coding	Isy1	exon	ENSMUSG00000030056	ProperStrand	172	1	-16.8018
chrX	43487675	43487695	LINE	Lx9	L1	chrXLx943487079	NonProperStrand	1	chr2	130103782	130103825	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-inf
chr19	3904233	3904250	protein_coding	Tcirg1	exon	ENSMUSG00000001750	ProperStrand	77	chr4	131908384	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.0780
chr3	55987238	55987256	protein_coding	Nbea	utr5	ENSMUSG00000027799	NonProperStrand	115	chr10	80644960	80645100	protein_coding	Eef2	utr3	ENSMUSG00000034994	ProperStrand	2244	4	-15.0768
chr17	44238108	44238125	protein_coding	Enpp4	intron	ENSMUSG00000023961	NonProperStrand	11	chr13	120260179	120260224	protein_coding	4833420G17Rik	intron	ENSMUSG00000062822	ProperStrand	49	1	-17.2779
chr2	90235313	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr12	85292848	85292864	protein_coding	2410016O06Rik	exon	ENSMUSG00000046791	ProperStrand	27	1	-6.0220
chr11	6428101	6428191	lincRNA	Gm11974	exon	ENSMUSG00000085156	ProperStrand	34	chr11	97642967	97643047	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.4852
chr11	102889971	102889987	protein_coding	Nmt1	exon	ENSMUSG00000020936	ProperStrand	43	chr19	21931928	21931953	protein_coding	Tmem2	utr3	ENSMUSG00000024754	ProperStrand	133	1	-12.3880
chr2	16278084	16278169	protein_coding	Plxdc2	utr5	ENSMUSG00000026748	ProperStrand	9	chr16	23111392	23111482	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.5836
chr13	96144983	96145000	protein_coding	Aggf1	exon	ENSMUSG00000021681	NonProperStrand	5	chr4	131826048	131826110	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	1	-14.3808
chr7	29115640	29116454	protein_coding	Supt5h	exon	ENSMUSG00000003435	ProperStrand	123	chr11	98878386	98878466	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-4.8840
chr2	168574480	168575242	protein_coding	Sall4	utr3	ENSMUSG00000027547	ProperStrand	82	chr4	131908236	131908341	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-1.9798
chr9	15119374	15119425	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	chr19	8799021	8799092	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	6	-1.4797
chr4	132675900	132675990	SINE	ID_B1	B4	chr4ID_B1132675881	NonProperStrand	1	chr12	112779164	112779244	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-inf
chr11	70049038	70049054	protein_coding	0610010K14Rik	utr3	ENSMUSG00000020831	ProperStrand	16	chr11	62416601	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-7.8033
chr5	113708484	113708553	protein_coding	Sgsm1	exon	ENSMUSG00000042216	ProperStrand	20	chr19	8799041	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-8.0292
chr8	46035997	46036087	protein_coding	Fat1	exon	ENSMUSG00000070047	ProperStrand	306	chr4	131865413	131865493	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-1.2631
chr11	97641487	97641577	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	chr5	121655127	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	4	-1.2126
chr16	56035864	56035964	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	chr8	98270035	98270094	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-1.6257
chrX	160840322	160840339	protein_coding	Figf	utr3	ENSMUSG00000031380	NonProperStrand	3	chr4	131908358	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-7.2242
chr5	31370959	31371099	protein_coding	Cad	exon	ENSMUSG00000013629	ProperStrand	260	chr5	121655016	121655095	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-2.4738
chr19	5796211	5802141	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr16	23111373	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	20	-1.0679
chr11	16307999	16308016	protein_coding	Vstm2a	intron	ENSMUSG00000048834	NonProperStrand	13	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-6.2408
chr11	62416977	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	chr2	91436309	91436336	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-0.9786
chr3	108421601	108421701	protein_coding	Wdr47	exon	ENSMUSG00000040389	ProperStrand	4	chr18	73693109	73693133	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-11.1535
chr1	173059563	173059653	protein_coding	Sdhc	utr3	ENSMUSG00000058076	ProperStrand	12	chr8	129468799	129468879	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-7.6151
chr9	106365667	106365683	protein_coding	Pcbp4	exon	ENSMUSG00000023495	ProperStrand	36	chr5	140448522	140448539	protein_coding	Elfn1	exon	ENSMUSG00000048988	ProperStrand	12	1	-17.7763
chrX	98849962	98849986	protein_coding	Ogt	intron	ENSMUSG00000034160	ProperStrand	49	chr8	129468746	129468868	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-4.8026
chr9	110034810	110034877	protein_coding	Smarcc1	intron	ENSMUSG00000032481	ProperStrand	108	chr11	62418015	62418087	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-4.4222
chr2	90235295	90235326	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	122075466	122075482	protein_coding	Snrk	exon	ENSMUSG00000038145	NonProperStrand	97	1	-3.5607
chr5	92497351	92497441	protein_coding	G3bp2	exon	ENSMUSG00000029405	ProperStrand	78	chr7	116663636	116663716	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.0734
chr4	154010843	154010860	protein_coding	Prdm16	utr5	ENSMUSG00000039410	ProperStrand	44	chr7	29136525	29136575	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-5.0481
chr17	26129527	26129544	protein_coding	Rab11fip3	exon	ENSMUSG00000037098	ProperStrand	32	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-9.0024
chr4	118781471	118781562	protein_coding	Slc2a1	utr5	ENSMUSG00000028645	ProperStrand	361	chr2	26768396	26768433	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	2	-4.0621
chr8	93534589	93534673	protein_coding	Chd9	exon	ENSMUSG00000056608	ProperStrand	35	chr9	15118323	15118378	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-4.4816
chr15	32473660	32473682	protein_coding	Sema5a	intron	ENSMUSG00000022231	ProperStrand	4	chr9	120038605	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-8.5118
chr10	75359822	75360194	protein_coding	Smarcb1	exon	ENSMUSG00000000902	ProperStrand	109	chr11	106362303	106362335	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-4.6833
chr10	114666236	114666320	protein_coding	Tbc1d15	exon	ENSMUSG00000020130	ProperStrand	12	chr16	43886794	43886850	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	1	-11.3507
chr12	45578864	45578880	protein_coding	Nrcam	intron	ENSMUSG00000020598	NonProperStrand	11	chr16	23110940	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.6241
chr2	131743768	131743858	protein_coding-noncoding	Prnp	utr5	ENSMUSG00000079037	ProperStrand	2	chr5	38521361	38521441	protein_coding	Stx18	intron	ENSMUSG00000029125	ProperStrand	3	1	-inf
chr5	124446073	124446098	protein_coding	Hip1r	exon	ENSMUSG00000000915	ProperStrand	31	chr14	76247712	76247751	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-5.4487
chr9	39882020	39882036	protein_coding	Olfr982	exon	ENSMUSG00000049010	NonProperStrand	35	chr6	71832629	71832687	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-6.6767
chr7	13610371	13610410	protein_coding	Trim28	exon	ENSMUSG00000005566	ProperStrand	296	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	1	-3.9337
chr2	36093557	36093573	protein_coding	Ptgs1	exon	ENSMUSG00000047250	NonProperStrand	5	chr1	162965530	162965587	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-8.2678
chr9	62992379	62992395	protein_coding	Skor1	exon	ENSMUSG00000022245	NonProperStrand	70	chr4	131908357	131908414	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.2038
chr11	32500864	32503675	protein_coding	Stk10	exon	ENSMUSG00000020272	NonProperStrand	73	chr2	26494798	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.7588
chr18	14798824	14799494	protein_coding	Ss18	exon	ENSMUSG00000037013	ProperStrand	24	chr4	131865856	131865946	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.3401
chr2	165896268	165896300	protein_coding	Ncoa3	utr3	ENSMUSG00000027678	ProperStrand	58	chr5	130300498	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.5677
chr15	77824677	77824693	protein_coding	Cacng2	utr3	ENSMUSG00000019146	NonProperStrand	10	chr2	21136127	21136143	protein_coding	Thnsl1	utr3	ENSMUSG00000048550	ProperStrand	10	1	-20.3924
chr9	48492188	48492208	protein_coding	Zbtb16	intron	ENSMUSG00000066687	ProperStrand	7	chr18	35716715	35716805	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-15.0288
chr15	80839914	80840080	protein_coding	Sgsm3	exon	ENSMUSG00000042303	ProperStrand	11	chr16	57391627	57391656	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	1	-13.7703
chr6	89292699	89292997	protein_coding	Plxna1	exon	ENSMUSG00000030084	ProperStrand	233	chr8	73419757	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-0.9976
chr11	84634790	84634907	protein_coding	Dhrs11	exon	ENSMUSG00000034449	ProperStrand	12	chr8	98269959	98270059	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-8.7817
chr18	56718963	56719051	protein_coding-noncoding	Aldh7a1	utr3	ENSMUSG00000053644	NonProperStrand	1	chr18	56718759	56718839	protein_coding	Aldh7a1	intron	ENSMUSG00000053644	NonProperStrand	1	1	-inf
chrX	115607488	115607507	LINE	Lx3C	L1	chrXLx3C115607342	ProperStrand	1	chr1	162967489	162967532	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-inf
chr2	179233011	179233027	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-6.5114
chr17	24361005	24361092	protein_coding	Ccnf	exon	ENSMUSG00000072082	ProperStrand	149	chr1	162967527	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	4	-7.3264
chr5	76033409	76035013	protein_coding	Kit	exon	ENSMUSG00000005672	ProperStrand	58	chr16	23111770	23111828	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.9572
chr5	65780779	65780820	protein_coding	Rpl9	exon	ENSMUSG00000047215	ProperStrand	113	chr7	29136552	29136595	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.3754
chr2	90235313	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chrX	57818774	57818791	protein_coding	Atp11c	intron	ENSMUSG00000062949	ProperStrand	12	1	-7.6663
chr13	6621193	6621292	protein_coding	Pfkp	exon	ENSMUSG00000021196	ProperStrand	197	chr11	55296284	55296332	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-3.8902
chr4	53504336	53504396	protein_coding	Slc44a1	exon	ENSMUSG00000028412	ProperStrand	38	chr16	23110962	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.7634
chr11	80258760	80258788	protein_coding	Psmd11	exon	ENSMUSG00000017428	ProperStrand	34	chr2	166890543	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	2	-13.8382
chr9	65507538	65507592	protein_coding	Rbpms2	utr3	ENSMUSG00000032387	ProperStrand	85	chr18	35716754	35716844	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.6197
chr17	36097663	36097764	protein_coding	Abcf1	exon	ENSMUSG00000038762	ProperStrand	206	chr2	130103448	130103466	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-5.6255
chr15	82980099	82980225	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr17	71980683	71980706	snoRNA	ENSMUSG00000093289_Snord92	.	ENSMUSG00000093289	ProperStrand	56	1	-7.2767
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr2	121176333	121176349	protein_coding	Ppip5k1	exon	ENSMUSG00000033526	ProperStrand	85	1	-7.8969
chr1	119934957	119934973	LINE	L1_Mm	L1	chr1L1_Mm119934812	ProperStrand	1	chr2	63936034	63936053	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-inf
chr5	114217286	114217386	protein_coding	Gm3511	utr3	ENSMUSG00000069196	ProperStrand	2	chr4	116828379	116828449	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-15.8656
chr11	97641536	97643122	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	chr11	62416599	62416657	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-1.4027
chr9	120038466	120038551	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	chr7	16524109	16524199	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	5	-3.9117
chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr17	34747537	34747555	protein_coding	Agpat1	exon	ENSMUSG00000034254	NonProperStrand	39	2	-11.7494
chr18	36720679	36720696	protein_coding	Ankhd1	utr5	ENSMUSG00000024483	ProperStrand	56	chr8	73419703	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.2551
chr5	109124122	109132306	protein_coding	Fgfrl1	exon	ENSMUSG00000008090	ProperStrand	111	chr9	15119632	15119726	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.6283
chr7	135065707	135067926	protein_coding	Myst1	exon	ENSMUSG00000030801	ProperStrand	4	chr16	23111392	23111472	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-6.3168
chr1	89656704	89656751	protein_coding	Atg16l1	intron	ENSMUSG00000026289	ProperStrand	41	chr16	23111374	23111500	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	5	-9.4643
chr11	77800114	77800187	protein_coding	Phf12	intron	ENSMUSG00000037791	ProperStrand	21	chr4	131908361	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.1622
chr15	98761900	98761968	protein_coding	Tuba1b	utr3	ENSMUSG00000023004	ProperStrand	32	chr7	117190026	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.5139
chr19	7059974	7060019	protein_coding	Vegfb	exon	ENSMUSG00000024962	ProperStrand	24	chr16	23111372	23111418	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.7195
chrX	11633918	11634008	protein_coding	Bcor	exon	ENSMUSG00000040363	ProperStrand	20	chr5	130300473	130300553	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.5361
chr19	32464273	32464289	lincRNA	2700046G09Rik	exon	ENSMUSG00000024893	ProperStrand	59	chr14	15572355	15572371	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	1	-11.3170
chr17	28471869	28471888	protein_coding	Tead3	exon	ENSMUSG00000002249	ProperStrand	4	chr16	23110958	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.6489
chr1	38131113	38131172	protein_coding	Rev1	intron	ENSMUSG00000026082	ProperStrand	48	chr7	51503492	51503548	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	6	-19.2182
chr10	80641694	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	chr15	79908930	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	2	-1.4076
chr8	13416896	13416912	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr9	110544350	110544366	protein_coding	Nbeal2	exon	ENSMUSG00000056724	ProperStrand	161	1	-4.5336
chr19	8799829	8799898	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	chr15	79908930	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	6	-0.7621
chr15	103022990	103023049	protein_coding	Cbx5	utr3	ENSMUSG00000009575	ProperStrand	98	chr3	68889086	68889186	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-2.3952
chr7	108079162	108079225	protein_coding	Arhgef17	exon	ENSMUSG00000032875	ProperStrand	33	chr2	79843543	79843559	protein_coding	Pde1a	intron	ENSMUSG00000059173	NonProperStrand	275	1	-11.4687
chr7	133592210	133592226	protein_coding	Atp2a1	exon	ENSMUSG00000030730	ProperStrand	49	chr9	64022854	64022878	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-8.4311
chr19	3851699	3851715	processed_transcript	Gm16066	.	ENSMUSG00000082848	NonProperStrand	11	chr13	3548111	3548129	protein_coding	Gdi2	exon	ENSMUSG00000021218	ProperStrand	49	1	-17.2779
chr7	29997743	29997760	protein_coding	Catsperg1	intron	ENSMUSG00000049676	ProperStrand	21	chr5	108336363	108336409	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-6.9568
chr2	4829164	4829180	protein_coding	Sephs1	utr3	ENSMUSG00000026662	NonProperStrand	271	chr16	91227718	91227735	protein_coding	Olig2	utr3	ENSMUSG00000039830	NonProperStrand	78	1	-9.7640
chr17	45722650	45722705	protein_coding	Slc29a1	exon	ENSMUSG00000023942	ProperStrand	95	chr17	35087894	35087928	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	2	-7.2007
chr2	155863121	155863137	protein_coding	Fer1l4	exon	ENSMUSG00000013338	ProperStrand	2	chr15	79908997	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-12.8905
chr8	14035275	14035365	protein_coding	Erich1	intron	ENSMUSG00000051978	ProperStrand	12	chr17	24857720	24857800	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-5.3067
chr1	189416402	189416492	LINE	L1MD	L1	chr1L1MD189415769	NonProperStrand	1	chr18	83033174	83033254	lincRNA	3010027C24Rik	intron	ENSMUSG00000085190	ProperStrand	1	1	-inf
chr2	157284997	157285087	protein_coding	Src	intron	ENSMUSG00000027646	ProperStrand	32	chr11	69481393	69481473	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-4.3754
chr7	13613089	13613269	protein_coding	Trim28	exon	ENSMUSG00000005566	ProperStrand	296	chr4	132530098	132530117	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	2	-10.3848
chr13	49779676	49779756	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	chr3	88497889	88497979	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-1.6306
chr1	72207058	72207148	protein_coding	Mreg	utr3	ENSMUSG00000039395	ProperStrand	63	chr4	131866179	131866259	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-3.5748
chrX	83547356	83547372	protein_coding	Mageb4	intron	ENSMUSG00000035427	NonProperStrand	191	chr8	73419713	73419775	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-1.2572
chr17	25931794	25931884	protein_coding	Metrn	utr3	ENSMUSG00000002274	ProperStrand	1	chr2	26493366	26493445	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-inf
chr19	5492754	5493204	protein_coding	Cfl1	exon	ENSMUSG00000056201	ProperStrand	88	chr2	130103466	130103500	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-7.2999
chrX	156315498	156315519	protein_coding	Sh3kbp1	intron	ENSMUSG00000040990	ProperStrand	67	chr12	106269469	106269557	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-3.9325
chr9	92495655	92497792	protein_coding	Plod2	exon	ENSMUSG00000032374	ProperStrand	52	chr9	15119995	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	3	-16.9967
chr9	45198928	45199653	protein_coding	Fxyd6	exon	ENSMUSG00000066705	NonProperStrand	108	chr1	55147975	55147998	protein_coding	Hspe1	utr3	ENSMUSG00000073676	ProperStrand	31	1	-13.4673
chr8	86450953	86457780	protein_coding	Lphn1	intron	ENSMUSG00000013033	ProperStrand	221	chr9	15119675	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	8	-10.0094
chrX	47988129	47988190	lincRNA	6720401G13Rik	exon	ENSMUSG00000085396	ProperStrand	34	chr10	110918549	110918639	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-4.5188
chr4	106093572	106093639	protein_coding	Usp24	exon	ENSMUSG00000028514	ProperStrand	74	chr4	98248273	98248290	protein_coding	Inadl	intron	ENSMUSG00000061859	NonProperStrand	15	1	-15.7227
chr13	101541067	101541088	protein_coding	Cenph	intron	ENSMUSG00000045273	NonProperStrand	45	chr4	131865856	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-8.3473
chr17	30730451	30730714	protein_coding	Glo1	utr3	ENSMUSG00000024026	ProperStrand	75	chr16	23111375	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-4.5642
chr17	34049131	34049162	protein_coding	Daxx	exon	ENSMUSG00000002307	ProperStrand	26	chr7	116663694	116663762	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-6.8095
chr15	99055310	99055329	protein_coding	Kcnh3	utr5	ENSMUSG00000037579	ProperStrand	24	chr14	76247747	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-5.9558
chr18	64627492	64627558	protein_coding	Fech	intron	ENSMUSG00000024588	ProperStrand	14	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-10.6799
chr11	102294588	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr9	15151472	15155306	protein_coding	5830418K08Rik	exon	ENSMUSG00000046111	ProperStrand	465	1	-4.8585
chr11	95435704	95435736	protein_coding	Ngfr	exon	ENSMUSG00000000120	ProperStrand	31	chr1	82865106	82865206	protein_coding	Agfg1	intron	ENSMUSG00000026159	ProperStrand	25	1	-16.3804
chr7	118222843	118222880	protein_coding	Eif4g2	exon	ENSMUSG00000005610	ProperStrand	134	chr9	120038563	120038673	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.6963
chr10	76880582	76880599	protein_coding-noncoding	Adarb1	utr3	ENSMUSG00000020262	NonProperStrand	7	chr19	8798484	8798512	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-9.5818
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr15	71624751	71624796	snoRNA	ENSMUSG00000088895_SNORA81	.	ENSMUSG00000088895	ProperStrand	348	1	-1.4252
chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	chr7	30043491	30043531	protein_coding	Spint2	exon	ENSMUSG00000074227	ProperStrand	82	1	-9.2053
chr13	49218439	49218455	protein_coding	Wnk2	intron	ENSMUSG00000037989	NonProperStrand	67	chr15	34370637	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-3.3467
chr1	162968442	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	chr14	31827478	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	3	-2.3788
chr3	101261612	101261698	protein_coding	Igsf3	exon	ENSMUSG00000042035	ProperStrand	73	chr7	29136535	29136625	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.0406
chr4	139008794	139008884	protein_coding	Ubr4	intron	ENSMUSG00000066036	ProperStrand	304	chr12	17552949	17553030	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-2.1361
chr2	158185533	158185633	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr9	40612831	40612885	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	2	-5.0378
chr1	155066647	155066663	protein_coding	Lamc1	utr3	ENSMUSG00000026478	NonProperStrand	12	chr5	54389949	54389965	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	1	-14.0613
chr16	78250022	78250045	Simple_repeat	(TCCCG)n	Simple_repeat	chr16(TCCCG)n78250013	NonProperStrand	6	chr2	26768371	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	2	-16.4324
chr2	60047475	60047494	protein_coding	Baz2b	intron	ENSMUSG00000026987	NonProperStrand	12	chr1	39605610	39605632	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-10.6135
chr1	162965530	162965601	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr9	15118518	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	5	-3.6682
chr6	122685603	122686599	protein_coding	Slc2a3	exon	ENSMUSG00000003153	ProperStrand	682	chr8	74446729	74446745	protein_coding	Zfp617	intron	ENSMUSG00000066880	NonProperStrand	208	1	-5.9870
chr9	63994675	63995114	protein_coding	Zwilch	exon	ENSMUSG00000032400	ProperStrand	29	chr11	97642993	97643073	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.7822
chr11	120208970	120209060	protein_coding	Actg1	exon	ENSMUSG00000062825	ProperStrand	178	chr17	24857722	24857802	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-1.5444
chr11	72567862	72567886	protein_coding	Ankfy1	exon	ENSMUSG00000020790	ProperStrand	68	chr9	122895680	122895697	protein_coding	Kif15	exon	ENSMUSG00000036768	ProperStrand	46	1	-13.5996
chr2	28543071	28543111	protein_coding	Tsc1	utr3	ENSMUSG00000026812	ProperStrand	29	chr19	8799609	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-8.2221
chr4	133686366	133686456	protein_coding	Ccdc21	utr3	ENSMUSG00000037443	ProperStrand	112	chr7	116663634	116663714	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.5131
chr7	30026273	30026289	protein_coding	Yif1b	intron	ENSMUSG00000030588	ProperStrand	154	chr4	131865855	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-2.0731
chr1	130059370	130059420	protein_coding	R3hdm1	exon	ENSMUSG00000056211	ProperStrand	43	chr19	8798740	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-5.4488
chr1	157773611	157773646	protein_coding	Cep350	exon	ENSMUSG00000033671	ProperStrand	48	chr4	116883451	116883541	snRNA	ENSMUSG00000070237_U5	.	ENSMUSG00000070237	ProperStrand	154	12	-21.1236
chr17	65452916	65452938	LTR	MTC	MaLR	chr17MTC65452903	NonProperStrand	12	chr16	23110827	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-9.5315
chr6	117874252	117874663	protein_coding	Hnrnpf	exon	ENSMUSG00000042079	ProperStrand	147	chr3	68889026	68889223	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	2	-3.1953
chr16	90386834	90386853	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	chr7	67125789	67125831	snoRNA	ENSMUSG00000089375_Snord107	.	ENSMUSG00000089375	ProperStrand	451	1	-8.1739
chr19	45308496	45308513	protein_coding	Lbx1	exon	ENSMUSG00000025216	ProperStrand	23	chr9	15074901	15074918	protein_coding	Med17	exon	ENSMUSG00000031935	ProperStrand	135	1	-13.6277
chr13	6586302	6587777	protein_coding	Pfkp	exon	ENSMUSG00000021196	ProperStrand	197	chr9	15118323	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-1.4755
chr9	54730127	54730227	protein_coding	Ireb2	exon	ENSMUSG00000032293	ProperStrand	45	chr2	26768408	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-6.1679
chr17	35643108	35643208	protein_coding	Pou5f1	exon	ENSMUSG00000024406	ProperStrand	104	chr4	131908826	131908890	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	6	-5.8588
chr1	162965885	162965936	non_coding	Gas5	.	ENSMUSG00000053332	ProperStrand	144	chr1	88247743	88247799	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	4	-11.4864
chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	chr16	3979839	3979855	protein_coding	Slx4	exon	ENSMUSG00000039738	ProperStrand	18	1	-13.2077
chr4	97812275	97812291	protein_coding	Nfia	intron	ENSMUSG00000028565	NonProperStrand	74	chr15	34370660	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-3.1665
chr13	21479455	21479522	protein_coding	Zkscan3	utr3	ENSMUSG00000021327	ProperStrand	9	chr16	23110911	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-8.1007
chr4	48447849	48447939	protein_coding	Tex10	exon	ENSMUSG00000028345	ProperStrand	9	chr16	23110904	23110984	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.9939
chr4	116827019	116827319	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	chr1	173041610	173041649	tRNA	tRNA710-ValCAC	.	239486	ProperStrand	206	4	-inf
chr16	75761550	75765200	protein_coding	Hspa13	exon	ENSMUSG00000032932	NonProperStrand	57	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-6.2492
chr5	37139806	37139822	protein_coding	Cno	exon	ENSMUSG00000060708	ProperStrand	4	chr7	116664800	116664851	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-7.9535
chr7	29965463	29965503	protein_coding	Psmd8	exon	ENSMUSG00000030591	ProperStrand	23	chr2	166890502	166890582	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	3	-19.2474
chr10	80640495	80640559	protein_coding	Eef2	exon	ENSMUSG00000034994	NonProperStrand	20	chr16	23111371	23111471	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	NonProperStrand	38	1	-16.4324
chr11	53211806	53211855	protein_coding	Aff4	exon	ENSMUSG00000049470	ProperStrand	94	chr1	146383882	146383901	protein_coding	Rgs21	intron	ENSMUSG00000091758	ProperStrand	1	1	-inf
chr8	73419293	73419393	protein_coding	Rpl18a	utr3	ENSMUSG00000045128	ProperStrand	394	chr15	34370545	34370617	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	6	-6.2232
chr4	131909483	131909529	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr4	3761829	3762108	protein_coding	Rps20	exon	ENSMUSG00000028234	ProperStrand	71	1	-6.9248
chr16	22060573	22060673	protein_coding	Igf2bp2	utr3	ENSMUSG00000033581	ProperStrand	23	chr4	131865434	131865457	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-5.8638
chr10	80372718	80380730	protein_coding	Lmnb2	exon	ENSMUSG00000062075	ProperStrand	14	chr3	123210854	123210889	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-4.7278
chr7	25295649	25295749	protein_coding	Zfp428	utr5	ENSMUSG00000064264	ProperStrand	23	chr5	130300497	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	5	-17.6209
chr5	28793411	28793427	protein_coding	Shh	utr5	ENSMUSG00000002633	ProperStrand	5	chr7	146064796	146064849	protein_coding	Ppp2r2d	intron	ENSMUSG00000041769	ProperStrand	62	1	-18.5961
chr4	43505832	43505922	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr1	183848597	183848655	protein_coding	Enah	exon	ENSMUSG00000022995	ProperStrand	196	1	-1.1771
chr15	80762182	80762282	protein_coding	Tnrc6b	utr3	ENSMUSG00000047888	ProperStrand	59	chr4	131865857	131865918	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.7940
chr10	68801276	68801341	protein_coding	Cdk1	exon	ENSMUSG00000019942	ProperStrand	42	chr3	153574584	153574628	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	1	-10.3928
chr8	93648721	93649754	protein_coding	Aktip	exon	ENSMUSG00000031667	ProperStrand	13	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-6.4970
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr7	52309977	52309993	protein_coding	Prrg2	exon	ENSMUSG00000007837	NonProperStrand	281	1	-5.6594
chr9	53033611	53033701	protein_coding	Ddx10	exon	ENSMUSG00000053289	ProperStrand	40	chr7	134671410	134671489	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-8.6851
chr6	37248544	37248562	protein_coding	Dgki	intron	ENSMUSG00000038665	ProperStrand	22	chr3	88899307	88899364	protein_coding	Fdps	exon	ENSMUSG00000059743	ProperStrand	12	2	-inf
chr3	90153338	90153406	protein_coding	Gatad2b	exon	ENSMUSG00000042390	ProperStrand	21	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	4	-16.5385
chr13	79659338	79659354	LTR	RodERV21-int	ERV1	chr13RodERV21-int79658190	ProperStrand	43	chr11	116704532	116704549	protein_coding	Jmjd6	utr5	ENSMUSG00000056962	ProperStrand	92	1	-13.1293
chr2	91490570	91490589	protein_coding	Arhgap1	intron	ENSMUSG00000027247	ProperStrand	13	chr11	57874710	57874777	protein_coding	Larp1	utr3	ENSMUSG00000037331	ProperStrand	201	1	-14.0055
chr6	32695230	32695320	LINE	L1Md_A	L1	chr6L1Md_A32690569	ProperStrand	1	chr7	54442968	54443058	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-inf
chr2	158205277	158205367	snoRNA	ENSMUSG00000064585_SNORA71	.	ENSMUSG00000064585	ProperStrand	418	chr19	8963089	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	6	-2.4274
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr6	142335802	142335840	protein_coding	Golt1b	utr5	ENSMUSG00000030245	ProperStrand	7	1	-11.3322
chr10	120709244	120712786	protein_coding	Tbc1d30	exon	ENSMUSG00000052302	ProperStrand	233	chr11	62416601	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-2.6502
chr9	67844600	67844700	Simple_repeat	(TTCC)n	Simple_repeat	chr9(TTCC)n67844548	ProperStrand	1	chr11	62951997	62952014	protein_coding	Pmp22	intron	ENSMUSG00000018217	NonProperStrand	40	1	-inf
chrX	131122056	131122509	protein_coding	Rpl36a	exon	ENSMUSG00000079435	ProperStrand	53	chr11	68886928	68887008	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-4.3796
chr1	164529065	164529082	protein_coding	Vamp4	utr3	ENSMUSG00000026696	NonProperStrand	8	chr12	60141412	60141509	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	3	-inf
chr8	3803148	3803183	misc_RNA	RNaseP_nuc	.	ENSMUSG00000088025	ProperStrand	328	chr11	63885336	63887052	protein_coding	Cox10	exon	ENSMUSG00000042148	NonProperStrand	187	1	-7.6388
chr7	29600369	29603532	protein_coding	Hnrnpl	exon	ENSMUSG00000015165	ProperStrand	150	chr9	120038564	120038613	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	3	-4.4379
chr6	120972435	120972507	protein_coding	Mical3	exon	ENSMUSG00000003178	ProperStrand	9	chr9	99483993	99484009	protein_coding	Dbr1	exon	ENSMUSG00000032469	ProperStrand	162	1	-15.2118
chr5	115880528	115880550	protein_coding	Msi1	intron	ENSMUSG00000054256	ProperStrand	12	chr16	23111775	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.8390
chr5	67746662	67746689	protein_coding	Slc30a9	utr3	ENSMUSG00000029221	ProperStrand	14	chr4	131865922	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.3681
chr8	125058824	125058863	protein_coding	Fam38a	intron	ENSMUSG00000014444	ProperStrand	132	chr13	96100595	96100692	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	1	-6.5023
chr7	17367517	17367588	protein_coding	Slc1a5	exon	ENSMUSG00000001918	ProperStrand	19	chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	1	-11.3948
chr4	126698977	126707222	protein_coding	Sfpq	exon	ENSMUSG00000028820	ProperStrand	340	chr18	33954840	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-1.6220
chr9	40611253	40611304	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr11	82258037	82258054	protein_coding	Tmem132e	exon	ENSMUSG00000020701	ProperStrand	21	1	-10.2600
chr10	126734687	126748597	protein_coding	Mars	exon	ENSMUSG00000040354	ProperStrand	38	chr19	8963027	8963141	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-7.8575
chr2	26768049	26768119	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	chr18	35716684	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	9	-1.9252
chr2	26251869	26251918	protein_coding	Pmpca	utr3	ENSMUSG00000026926	ProperStrand	45	chr4	131865856	131865963	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.2312
chrX	159199536	159199593	protein_coding	Rbbp7	exon	ENSMUSG00000031353	ProperStrand	48	chr3	123210854	123210933	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.4382
chr4	149424597	149424689	lincRNA	Gm13067	intron	ENSMUSG00000086665	ProperStrand	8	chr6	125136376	125136419	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	1	-10.5544
chr13	73626471	73626520	protein_coding	Lpcat1	exon	ENSMUSG00000021608	ProperStrand	42	chr4	131908689	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-4.9867
chr17	24301247	24301307	protein_coding	Atp6v0c	utr3	ENSMUSG00000024121	ProperStrand	75	chr11	97642971	97643071	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.0991
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr7	26496729	26496751	protein_coding	Ccdc97	utr3	ENSMUSG00000002608	ProperStrand	10	1	-15.0302
chr6	115876313	115876330	protein_coding	Ift122	exon	ENSMUSG00000030323	ProperStrand	20	chr11	62416951	62416986	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-8.2434
chr19	8799071	8799097	lincRNA	Snhg1	exon	ENSMUSG00000090867	ProperStrand	100	chr9	15118284	15118321	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-2.5569
chr7	127897734	127897755	protein_coding	Vwa3a	intron	ENSMUSG00000030889	ProperStrand	7	chr16	11144103	11144203	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	1	-14.8847
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr18	75161534	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-2.0431
chr11	79806835	79806868	protein_coding	Suz12	exon	ENSMUSG00000017548	ProperStrand	53	chr17	88077661	88077677	protein_coding	Msh2	exon	ENSMUSG00000024151	ProperStrand	124	1	-12.1060
chr11	19964171	19971960	protein_coding	Actr2	intron	ENSMUSG00000020152	ProperStrand	72	chr4	131908689	131908783	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-1.9615
chr5	28688568	28688652	protein_coding	Rbm33	exon	ENSMUSG00000048271	ProperStrand	78	chr7	80547651	80547667	protein_coding	Rgma	intron	ENSMUSG00000070509	ProperStrand	46	1	-13.3228
chr10	60803975	60804028	protein_coding	X99384	exon	ENSMUSG00000020092	ProperStrand	60	chr11	107442811	107442828	protein_coding	Helz	intron	ENSMUSG00000020721	ProperStrand	60	1	-13.3156
chr7	140901041	140901131	protein_coding	Bccip	exon	ENSMUSG00000030983	ProperStrand	19	chr17	24856708	24856737	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-8.7377
chr9	78023107	78023219	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr15	34370545	34370680	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	14	-1.9210
chr10	10937053	10937100	protein_coding	Shprh	utr3	ENSMUSG00000090112	ProperStrand	52	chr7	116663713	116663770	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	4	-9.7661
chr11	120678221	120678307	protein_coding	Fasn	exon	ENSMUSG00000025153	ProperStrand	298	chr12	112779159	112779206	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-1.9065
chr4	43505703	43505793	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr10	61386244	61386295	protein_coding	Col13a1	intron	ENSMUSG00000058806	NonProperStrand	8	1	-7.0216
chr2	26493360	26493391	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chrX	98276069	98276169	protein_coding	Slc7a3	exon	ENSMUSG00000031297	ProperStrand	8	1	-10.3032
chr15	48504960	48504976	protein_coding	Csmd3	exon	ENSMUSG00000022311	NonProperStrand	25	chr11	69482250	69482601	protein_coding	Eif4a1	exon	ENSMUSG00000059796	ProperStrand	108	1	-13.9038
chr6	72310104	72310149	protein_coding	Rnf181	utr3	ENSMUSG00000055850	ProperStrand	12	chr16	23110876	23110966	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.4686
chrX	99445995	99446012	protein_coding	Cited1	utr5	ENSMUSG00000051159	ProperStrand	72	chr1	162967489	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-5.4063
chr16	23110455	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	chr2	166888977	166889057	snoRNA	ENSMUSG00000077515_SNORD12	.	ENSMUSG00000077515	ProperStrand	191	6	-6.8791
chr13	34220361	34220838	protein_coding	Tubb2b	exon	ENSMUSG00000045136	ProperStrand	49	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-8.1448
chr6	143813837	143813853	protein_coding	Sox5	intron	ENSMUSG00000041540	NonProperStrand	49	chr9	15118245	15118268	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.8425
chr8	86883520	86883610	LTR	MTE2b	MaLR	chr8MTE2b86883450	NonProperStrand	1	chr8	97775278	97775358	protein_coding	Cngb1	intron	ENSMUSG00000031789	NonProperStrand	17	1	-inf
mmu-miR-1949	5	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr12	60141412	60141509	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-2.0253
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr12	111873764	111873859	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	1	-1.6088
chr4	138904276	138904357	protein_coding	Mrto4	exon	ENSMUSG00000028741	ProperStrand	40	chr16	23110961	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.7072
chr9	112939793	112939811	LTR	ORR1A4-int	MaLR	chr9ORR1A4-int112939689	ProperStrand	2	chr17	24665420	24665465	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-12.3390
chr11	72264873	72264939	protein_coding	Mybbp1a	exon	ENSMUSG00000040463	ProperStrand	279	chr15	78504284	78504301	protein_coding	Elfn2	exon	ENSMUSG00000043460	NonProperStrand	20	1	-12.4597
chr8	24169015	24169031	protein_coding	Ank1	utr5	ENSMUSG00000031543	ProperStrand	47	chr11	97642952	97643079	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-7.4739
chr1	34689031	34689054	LTR	RLTR28B	ERVL	chr1RLTR28B34689014	NonProperStrand	1	chr10	59454868	59454924	protein_coding	Anapc16	intron	ENSMUSG00000020107	ProperStrand	8	1	-inf
chr14	31920485	31920531	protein_coding	Pbrm1	intron	ENSMUSG00000042323	ProperStrand	87	chr10	23505190	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-1.5882
chr12	17552948	17553031	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	NonProperStrand	16	chr16	23110903	23111003	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	NonProperStrand	93	1	-15.1243
chr17	35299507	35299557	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	chr8	113362430	113362482	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	3	-3.8692
chr14	26480683	26480702	protein_coding	Zmiz1	intron	ENSMUSG00000007817	NonProperStrand	4	chr7	29581075	29581109	protein_coding	Rinl	exon	ENSMUSG00000051735	ProperStrand	10	1	-19.3291
chr1	155287312	155287355	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	chr8	106876278	106876309	protein_coding	Gm9853	utr3	ENSMUSG00000051554	ProperStrand	25	1	-10.7479
chr10	8532624	8532641	protein_coding	Sash1	intron	ENSMUSG00000015305	NonProperStrand	14	chr16	23111374	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.7143
chr5	45888208	45888639	protein_coding	Lap3	exon	ENSMUSG00000039682	ProperStrand	87	chr16	23111694	23111784	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.3456
chr15	12802423	12802513	protein_coding	Drosha	intron	ENSMUSG00000022191	ProperStrand	163	chr1	89673608	89673688	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-1.5895
chr11	72730043	72730059	protein_coding	Zzef1	exon	ENSMUSG00000055670	NonProperStrand	16	chr9	15119373	15119428	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	2	-12.4619
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr9	21823257	21823273	protein_coding	Elavl3	exon	ENSMUSG00000003410	NonProperStrand	137	1	-7.0707
chr12	101759078	101759095	Low_complexity	GC_rich	Low_complexity	chr12GC_rich101758901	ProperStrand	34	chr10	79597425	79597509	protein_coding	Dos	utr5	ENSMUSG00000035640	ProperStrand	45	1	-15.0234
chr4	56910500	56910629	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	chr13	96100605	96100695	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	8	-14.1705
chr10	80522727	80522746	protein_coding	Sgta	intron	ENSMUSG00000004937	ProperStrand	17	chr9	15119658	15119758	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.9895
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr15	100311922	100311938	protein_coding	Csrnp2	utr3	ENSMUSG00000044636	NonProperStrand	60	4	-14.2147
chr1	182740314	182741943	protein_coding	H3f3a	exon	ENSMUSG00000060743	ProperStrand	46	chr1	162967546	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-3.9691
chr18	38409775	38409791	lincRNA	1700086O06Rik	exon	ENSMUSG00000086988	NonProperStrand	28	chr9	14081055	14110645	protein_coding	Sesn3	exon	ENSMUSG00000032009	ProperStrand	8	1	-18.2452
chr5	130743850	130743942	protein_coding	Tyw1	exon	ENSMUSG00000056310	NonProperStrand	5	chr7	6371465	6371484	protein_coding	AC188461.4	intron	ENSMUSG00000093536	NonProperStrand	5	3	-19.0881
chr2	93044455	93044471	protein_coding	Tspan18	utr3	ENSMUSG00000027217	NonProperStrand	14	chr4	131908356	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.9265
chr7	86281947	86281973	protein_coding	Mfge8	intron	ENSMUSG00000030605	ProperStrand	73	chr9	120038571	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	3	-7.0110
chr9	23211250	23211267	protein_coding	Bmper	exon	ENSMUSG00000031963	ProperStrand	16	chr9	103401280	103401296	protein_coding	Tmem108	exon	ENSMUSG00000042757	NonProperStrand	323	1	-12.6268
chr3	79335603	79335683	protein_coding	Fnip2	intron	ENSMUSG00000061175	ProperStrand	45	chr9	15119305	15119395	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	5	-21.5386
chr16	91660462	91660480	protein_coding	Son	exon	ENSMUSG00000022961	ProperStrand	59	chr3	108228259	108228275	protein_coding	Sars	utr3	ENSMUSG00000068739	NonProperStrand	200	1	-10.9320
chr8	124909961	124909978	protein_coding	Zc3h18	intron	ENSMUSG00000017478	NonProperStrand	9	chr11	106362640	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-11.2794
chr1	182530691	182530771	protein_coding	Parp1	utr3	ENSMUSG00000026496	ProperStrand	227	chr9	75377303	75380293	protein_coding	Tmod3	exon	ENSMUSG00000058587	ProperStrand	7	1	-15.0727
chrX	74304398	74304488	LINE	L1Md_F2	L1	chrXL1Md_F274303822	ProperStrand	1	chrX	74304599	74304679	LINE	L1_Mm	L1	chrXL1_Mm74304500	ProperStrand	1	1	-inf
chr2	32061940	32062006	protein_coding	Prrc2b	exon	ENSMUSG00000039262	ProperStrand	344	chr5	108334264	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-1.7194
chr4	12022714	12022766	protein_coding	C430048L16Rik	exon	ENSMUSG00000052137	ProperStrand	2	chr19	8798776	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-12.1939
chr6	125112409	125113202	protein_coding	Gapdh	exon	ENSMUSG00000057666	ProperStrand	356	chr7	29136547	29136653	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-1.0092
chr10	25241777	25241796	protein_coding	Epb4.1l2	intron	ENSMUSG00000019978	ProperStrand	105	chr1	162967114	162967133	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	1	-7.5623
chr6	146551576	146551676	protein_coding	Tm7sf3	utr3	ENSMUSG00000040234	ProperStrand	43	chr13	21519753	21519803	protein_coding	Pgbd1	intron	ENSMUSG00000055313	ProperStrand	7	1	-19.0659
chr6	131330290	131330390	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	ProperStrand	408	chr18	33954816	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	3	-2.1770
chr14	13211052	13211069	protein_coding	Cadps	intron	ENSMUSG00000054423	ProperStrand	32	chr7	16524111	16524178	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	1	-10.9870
chrX	71517823	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	chr5	108336378	108336487	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	4	-1.0689
chr15	99256421	99287989	protein_coding	Nckap5l	intron	ENSMUSG00000023009	ProperStrand	51	chr7	148634701	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-7.1784
chr14	64081495	64081513	protein_coding	Fam167a	utr3	ENSMUSG00000035095	ProperStrand	80	chr9	120038613	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.5344
chr11	75570456	75578936	protein_coding	Ywhae	utr3	ENSMUSG00000020849	ProperStrand	176	chr5	108336378	108336478	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-4.9902
chr8	108091332	108091349	protein_coding	Agrp	exon	ENSMUSG00000005705	ProperStrand	4	chr7	30231490	30231593	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	2	-22.4965
chr8	86434162	86434256	protein_coding	Lphn1	intron	ENSMUSG00000013033	ProperStrand	221	chr15	5068446	5068479	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-3.5710
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	107463024	107463041	protein_coding	P4ha3	intron	ENSMUSG00000051048	NonProperStrand	29	1	-5.8800
chr3	79397618	79399127	protein_coding	Ppid	exon	ENSMUSG00000027804	ProperStrand	7	chr9	120037903	120037993	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-9.0569
chr11	59550652	59554633	protein_coding	Mprip	exon	ENSMUSG00000005417	ProperStrand	58	chr17	24857719	24857799	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.3538
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr7	109044954	109046253	protein_coding	3200002M19Rik	utr5	ENSMUSG00000030649	ProperStrand	22	1	-9.8192
chr3	68889026	68889126	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	chr15	57807528	57807577	tRNA	tRNA913-MetCAT	.	976644	ProperStrand	48	1	-3.6671
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr5	143667081	143667119	protein_coding	Actb	exon	ENSMUSG00000029580	ProperStrand	446	1	-3.0894
chr4	114579429	114579446	protein_coding	Foxd2	utr3	ENSMUSG00000055210	ProperStrand	5	chr4	131865860	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-10.8861
chr4	137212065	137212106	protein_coding	Usp48	utr3	ENSMUSG00000043411	ProperStrand	135	chr5	74489577	74489671	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-2.3345
chr14	17263075	17263165	protein_coding	Top2b	utr3	ENSMUSG00000017485	ProperStrand	24	chr18	35716752	35716832	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.8034
chr13	6580485	6580575	protein_coding	Pfkp	utr3	ENSMUSG00000021196	ProperStrand	197	chr7	148634716	148634796	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-1.9012
mmu-miR-6240	1	23	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr17	35278500	35278793	protein_coding	Bag6	exon	ENSMUSG00000024392	ProperStrand	181	1	-3.7854
chr8	108139495	108139667	protein_coding	Fam65a	exon	ENSMUSG00000038604	ProperStrand	19	chr9	15120006	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	2	-15.2072
chr7	36587880	36587928	protein_coding	Zfp507	utr5	ENSMUSG00000044452	ProperStrand	66	chr15	34370575	34370665	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-3.3742
chr1	72642466	72642522	protein_coding	Smarcal1	exon	ENSMUSG00000039354	ProperStrand	23	chr9	15119348	15119425	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-7.0070
chr14	8717250	8720126	protein_coding	Flnb	exon	ENSMUSG00000025278	ProperStrand	124	chr7	141399351	141399367	protein_coding	Adam12	intron	ENSMUSG00000054555	NonProperStrand	49	1	-12.2648
chr16	57391626	57391723	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr10	23506279	23506342	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	NonProperStrand	2	1	-18.0561
chr10	60692417	60692433	protein_coding	Adamts14	exon	ENSMUSG00000059901	NonProperStrand	127	chr1	162966813	162966838	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-4.7973
chr5	117801732	117801781	protein_coding	Vsig10	exon	ENSMUSG00000066894	ProperStrand	11	chr1	162965581	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-10.7649
chr12	68766434	68766514	LINE	L1_Mus2	L1	chr12L1_Mus268766146	ProperStrand	12	chr1	139611176	139611266	LINE	L1Md_A	L1	chr1L1Md_A139606597	ProperStrand	1	1	-inf
chr13	103895241	103895257	protein_coding	Mast4	intron	ENSMUSG00000034751	ProperStrand	150	chr18	73693085	73693106	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-3.7729
chr12	8348643	8348699	protein_coding	Hs1bp3	exon	ENSMUSG00000020605	ProperStrand	35	chr1	162968217	162968291	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-7.8935
chrX	92621294	92621348	protein_coding	Fam123b	exon	ENSMUSG00000050332	ProperStrand	57	chr10	110918667	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-3.5431
chr6	82689543	82689643	protein_coding	Hk2	exon	ENSMUSG00000000628	ProperStrand	88	chr8	94881826	94881842	protein_coding	Irx5	utr5	ENSMUSG00000031737	NonProperStrand	9	5	-19.5381
chrY	455611	455630	protein_coding	Uty	intron	ENSMUSG00000068457	ProperStrand	26	chr19	8798507	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-6.8655
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr10	116659328	116661318	protein_coding	Yeats4	exon	ENSMUSG00000020171	ProperStrand	10	1	-11.6319
chr18	57455389	57455405	protein_coding	Megf10	utr3	ENSMUSG00000024593	ProperStrand	143	chr11	120148960	120148976	protein_coding	Bahcc1	exon	ENSMUSG00000039741	NonProperStrand	268	1	-8.5739
chr11	87240292	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	chr8	129468751	129468831	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-2.3203
chr18	74440119	74440219	protein_coding	Mbd1	intron	ENSMUSG00000024561	ProperStrand	13	chr7	148634795	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-7.0006
chr4	134880961	134881027	protein_coding	Srrm1	exon	ENSMUSG00000028809	ProperStrand	142	chr2	26768049	26768088	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	3	-15.1446
chr4	132849427	132849443	protein_coding	Wdtc1	utr3	ENSMUSG00000037622	NonProperStrand	14	chr4	131908356	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.9265
chr11	88706289	88706389	protein_coding	Akap1	exon	ENSMUSG00000018428	ProperStrand	45	chr14	119693352	119693368	protein_coding	Hs6st3	intron	ENSMUSG00000053465	NonProperStrand	134	1	-12.2809
chr8	69401573	69401607	protein_coding	Naf1	exon	ENSMUSG00000014907	ProperStrand	104	chr12	92811971	92812015	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	1	-7.4736
chr8	64017611	64028375	protein_coding	Palld	exon	ENSMUSG00000058056	NonProperStrand	125	chr14	31827477	31827543	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-5.5002
chr11	62416578	62416653	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	chr19	8799830	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	9	-1.4671
chr5	74489542	74489605	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr15	89100260	89100278	protein_coding	Ppp6r2	exon	ENSMUSG00000036561	ProperStrand	8	1	-9.7175
chr6	58616965	58616989	protein_coding	Abcg2	exon	ENSMUSG00000029802	ProperStrand	4	chr1	118310865	118310883	protein_coding	Cntnap5a	intron	ENSMUSG00000070695	NonProperStrand	9	1	-19.8837
chr11	15212155	15212171	LINE	Lx	L1	chr11Lx15211662	ProperStrand	54	chr7	87363865	87363919	protein_coding	Sema4b	exon	ENSMUSG00000030539	ProperStrand	54	2	-22.7751
chr8	27384889	27384905	LTR	MLT1B	MaLR	chr8MLT1B27384841	ProperStrand	10	chr16	23110828	23110875	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.7978
chr4	116875158	116875249	snRNA	ENSMUSG00000070228_U5	.	ENSMUSG00000070228	ProperStrand	131	chr11	69481335	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-3.4055
chr9	92158033	92159501	protein_coding	Plscr1	exon	ENSMUSG00000032369	ProperStrand	3	chr15	79913288	79913336	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-9.8112
chr19	42016448	42016479	protein_coding	Zdhhc16	exon	ENSMUSG00000025157	ProperStrand	4	chr4	131908779	131908869	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-6.2660
chr19	46433596	46433635	snoRNA	ENSMUSG00000065204_SNORA32	.	ENSMUSG00000065204	ProperStrand	20	chr2	26494708	26494809	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.1919
chr16	64851346	64851369	Simple_repeat	(CCG)n	Simple_repeat	chr16(CCG)n64851329	NonProperStrand	15	chr2	25702680	25702696	protein_coding	Sohlh1	exon	ENSMUSG00000059625	ProperStrand	22	1	-18.3168
chr6	32537830	32537847	protein_coding	Plxna4	utr5	ENSMUSG00000029765	ProperStrand	15	chr10	110918592	110918634	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-6.1363
chr3	157674634	157674713	protein_coding	Srsf11	utr3	ENSMUSG00000055436	ProperStrand	46	chr10	23505180	23505270	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-6.5984
chr4	122968584	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	chr11	68886964	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	11	-3.3866
chr15	79046637	79047135	antisense	Gm10863	.	ENSMUSG00000075555	ProperStrand	6	chr16	23110832	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-10.1290
chr4	138867205	138867223	protein_coding	Akr7a5	intron	ENSMUSG00000028743	ProperStrand	22	chr11	106362639	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-9.4258
chr10	80797342	80797358	protein_coding	Tbxa2r	exon	ENSMUSG00000034881	NonProperStrand	40	chr4	131865867	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.4299
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr10	80644855	80644904	protein_coding	Eef2	utr3	ENSMUSG00000034994	ProperStrand	2244	1	-1.8012
chr10	126954045	126954145	protein_coding	Ndufa4l2	utr3	ENSMUSG00000040280	ProperStrand	18	chr9	120038467	120038528	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	9	-19.7398
chr17	35089182	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	chr1	172975135	172975189	tRNA	tRNA699-GlyGCC	.	1188453	ProperStrand	660	1	-1.2744
chr7	27978045	27980466	protein_coding	Snrpa	exon	ENSMUSG00000061479	ProperStrand	56	chr1	162965989	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-3.7313
chr13	95312805	95312870	protein_coding	Ap3b1	utr3	ENSMUSG00000021686	ProperStrand	96	chr18	35716787	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	8	-14.6402
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr19	38035567	38041533	protein_coding	Myof	exon	ENSMUSG00000048612	ProperStrand	37	1	-9.8127
chr8	90690904	90691004	protein_coding	Heatr3	exon	ENSMUSG00000031657	ProperStrand	24	chr19	8963027	8963066	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.9221
chr18	78180266	78180297	protein_coding	5430411K18Rik	exon	ENSMUSG00000039840	ProperStrand	17	chr19	8963129	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.5881
chr10	95499367	95499383	protein_coding	Eea1	utr3	ENSMUSG00000036499	ProperStrand	82	chr19	46836213	46836229	protein_coding	Cnnm2	utr5	ENSMUSG00000064105	NonProperStrand	19	1	-15.0142
chr14	121864130	121864220	protein_coding	Slc15a1	exon	ENSMUSG00000025557	NonProperStrand	5	chr8	26629296	26629376	protein_coding	Fgfr1	utr5	ENSMUSG00000091895	NonProperStrand	1	1	-inf
chr4	144758457	144758474	protein_coding	Vps13d	exon	ENSMUSG00000020220	ProperStrand	59	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-9.4031
chr11	117828359	117828449	protein_coding	Socs3	utr3	ENSMUSG00000053113	ProperStrand	137	chr18	33954817	33954897	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-2.0669
chr8	25760125	25760146	protein_coding	Adam18	intron	ENSMUSG00000031552	NonProperStrand	5	chr2	130101991	130102056	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	4	-18.8934
chr8	4289050	4289094	protein_coding	Elavl1	utr3	ENSMUSG00000040028	ProperStrand	39	chr7	116663719	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-5.6284
chr18	73693122	73693148	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr15	71624775	71624798	snoRNA	ENSMUSG00000088895_SNORA81	.	ENSMUSG00000088895	ProperStrand	348	1	-2.2835
chr19	8798463	8798553	lincRNA	Snhg1	exon	ENSMUSG00000090867	ProperStrand	100	chr7	29136532	29136611	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.5524
chr4	154348890	154350459	protein_coding	Pank4	exon	ENSMUSG00000029056	ProperStrand	15	chr1	89681330	89681395	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-8.2175
chr6	95447695	95539006	protein_coding	Suclg2	exon	ENSMUSG00000061838	ProperStrand	35	chr16	23111382	23111487	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-3.7592
chr4	43429558	43434544	protein_coding	Rusc2	exon	ENSMUSG00000035969	ProperStrand	22	chr4	131908236	131908300	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.0772
chr14	32103733	32103751	protein_coding	Dnahc1	exon	ENSMUSG00000019027	NonProperStrand	12	chr16	23110828	23110874	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-4.4633
chr10	30580880	30580960	LINE	L1Md_F3	L1	chr10L1Md_F330579111	ProperStrand	1	chr7	54443079	54443169	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-inf
chr3	128597484	128597500	LINE	L1MD2	L1	chr3L1MD2128597388	ProperStrand	9	chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	1	-15.3094
chr12	60141322	60141510	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	chr11	6428035	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	18	-7.0211
chr18	21184649	21184686	protein_coding	Rnf138	utr3	ENSMUSG00000024317	ProperStrand	12	chr16	23111740	23111804	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-8.1126
chr4	129662259	129662276	protein_coding	Bai2	utr5	ENSMUSG00000028782	ProperStrand	119	chr17	35089221	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-4.1686
chrX	70922168	70922224	protein_coding	Slc6a8	exon	ENSMUSG00000019558	ProperStrand	47	chr11	115212282	115212299	protein_coding	C630004H02Rik	exon	ENSMUSG00000034586	NonProperStrand	6	1	-18.6791
chr3	89009743	89009759	protein_coding	Gba	exon	ENSMUSG00000028048	NonProperStrand	88	chr19	8963129	8963165	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.6633
chr2	32818170	32818506	protein_coding	Rpl12	exon	ENSMUSG00000038900	ProperStrand	167	chr4	122968676	122968718	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-4.2968
chr8	74877982	74878062	protein_coding	Eps15l1	intron	ENSMUSG00000006276	ProperStrand	42	chr5	108334239	108334329	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-5.5141
chr8	113362430	113362480	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	chr13	49779746	49779806	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-3.1421
chr14	51427119	51427209	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr19	44188435	44188515	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	1	-2.0482
chr16	23111707	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	chr2	103880859	103880963	snoRNA	ENSMUSG00000087739_SCARNA21	.	ENSMUSG00000087739	ProperStrand	50	2	-3.9432
chr16	57391728	57391792	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr8	98270014	98270096	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	NonProperStrand	11	3	-19.6276
chr7	35000378	35000478	protein_coding	Gpi1	intron	ENSMUSG00000036427	ProperStrand	288	chr4	131865454	131865518	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-1.3471
chr2	71259791	71272140	protein_coding	Hat1	exon	ENSMUSG00000027018	ProperStrand	53	chr7	109608096	109608843	protein_coding	Rrm1	exon	ENSMUSG00000030978	ProperStrand	14	2	-inf
chr19	36168949	36174709	protein_coding	Rpp30	exon	ENSMUSG00000024800	ProperStrand	3	chr11	68887040	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	2	-17.2984
chr8	54679632	54679722	protein_coding	Neil3	intron	ENSMUSG00000039396	ProperStrand	14	chr16	23110920	23111000	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.2008
chr7	29116401	29116501	protein_coding	Supt5h	exon	ENSMUSG00000003435	ProperStrand	123	chr3	144382353	144382431	protein_coding	Sh3glb1	intron	ENSMUSG00000037062	ProperStrand	9	1	-15.7874
chr10	62043500	62043527	protein_coding	Ddx21	utr3	ENSMUSG00000020075	ProperStrand	137	chr1	162968454	162968510	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-4.4774
chr14	27446408	27446452	protein_coding	Fam116a	exon	ENSMUSG00000040818	ProperStrand	23	chr2	26494778	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.9167
chr5	122908536	122909530	protein_coding	Atp2a2	exon	ENSMUSG00000029467	ProperStrand	166	chr18	35714202	35714292	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-1.7110
chr1	88247739	88247819	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	chr16	32243847	32243937	snoRNA	ENSMUSG00000080440_SNORA79	.	ENSMUSG00000080440	ProperStrand	140	1	-3.4939
chr6	29104870	29105101	protein_coding	Rbm28	exon	ENSMUSG00000029701	ProperStrand	24	chr7	117190023	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-5.0740
chr4	141075396	141075476	protein_coding	Spen	intron	ENSMUSG00000040761	ProperStrand	161	chr12	5028133	5028223	protein_coding	Atad2b	intron	ENSMUSG00000052812	NonProperStrand	4	1	-17.0497
chr14	33002423	33004575	protein_coding	Timm23	exon	ENSMUSG00000013701	ProperStrand	24	chr15	82015833	82015853	protein_coding	Srebf2	exon	ENSMUSG00000022463	ProperStrand	592	1	-10.5836
chr3	159502831	159502850	protein_coding	Wls	utr5	ENSMUSG00000028173	NonProperStrand	35	chr1	162968441	162968465	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-7.1499
chr5	31916531	31916551	protein_coding-noncoding	Mrpl33	utr5	ENSMUSG00000029142	ProperStrand	4	chr16	23110909	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.6489
chr4	62184860	62184960	protein_coding	Pole3	utr3	ENSMUSG00000028394	ProperStrand	18	chr1	162966850	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	17	-inf
chr16	20686906	20686996	protein_coding	Eif4g1	exon	ENSMUSG00000045983	ProperStrand	199	chr16	23110454	23110534	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-0.7350
chr11	3317974	3318074	protein_coding	Rnf185	utr3	ENSMUSG00000020448	ProperStrand	12	chr1	89673717	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-6.3904
chr19	46142577	46143627	protein_coding	Pprc1	exon	ENSMUSG00000055491	ProperStrand	143	chr11	6428035	6428098	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.7276
chr8	3153730	3153747	protein_coding	Insr	utr3	ENSMUSG00000005534	ProperStrand	25	chr10	23505150	23505233	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.6150
chr8	109380781	109380861	SINE	B1_Mus1	Alu	chr8B1_Mus1109380719	ProperStrand	1	chr8	109380964	109381054	SINE	ID_B1	B4	chr8ID_B1109380905	NonProperStrand	1	1	-inf
chr1	158680403	158680483	LINE	Lx3B	L1	chr1Lx3B158680020	NonProperStrand	1	chr1	158680699	158680789	LTR	MTD	MaLR	chr1MTD158680554	NonProperStrand	1	1	-inf
chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	chr9	59513713	59513735	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	1	-3.7434
chr11	70266927	70266996	protein_coding	Med11	utr3	ENSMUSG00000018923	ProperStrand	3	chr10	23505188	23505278	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-6.9610
chr12	32479922	32479941	protein_coding	Cog5	intron	ENSMUSG00000035933	NonProperStrand	8	chr4	131908300	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-8.5021
chr1	38490606	38490628	protein_coding	Aff3	intron	ENSMUSG00000037138	ProperStrand	20	chr7	134671403	134671493	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-10.0911
chr1	182866824	182866841	protein_coding	Lefty1	exon	ENSMUSG00000038793	ProperStrand	28	chr7	67125763	67125817	snoRNA	ENSMUSG00000089375_Snord107	.	ENSMUSG00000089375	ProperStrand	451	1	-10.8131
chr6	125047161	125047179	protein_coding	Chd4	utr5	ENSMUSG00000063870	ProperStrand	303	chr19	8963085	8963175	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-1.2214
chr7	72001137	72001154	protein_coding-noncoding	Fam189a1	utr3	ENSMUSG00000030518	NonProperStrand	11	chr3	145601279	145601864	protein_coding	2410004B18Rik	exon	ENSMUSG00000036873	ProperStrand	10	1	-19.9045
chr1	168028327	168028351	protein_coding	Dusp27	utr3	ENSMUSG00000026564	ProperStrand	47	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	3	-14.5501
chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	chr17	24665420	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-1.4125
chr4	116827804	116827891	snoRNA	ENSMUSG00000064751_SNORD46	.	ENSMUSG00000064751	ProperStrand	132	chr16	23110464	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-2.3793
chr13	100897806	100897841	protein_coding	Smn1	exon	ENSMUSG00000021645	ProperStrand	22	chr9	15118332	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-5.3884
chr16	31858094	31858133	protein_coding	Dlg1	exon	ENSMUSG00000022770	ProperStrand	69	chr2	157119950	157120991	protein_coding	Rpn2	exon	ENSMUSG00000027642	ProperStrand	363	1	-9.4266
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-8.0191
chr2	167836658	167836685	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	chr17	48061236	48061255	protein_coding	Foxp4	utr5	ENSMUSG00000023991	ProperStrand	27	1	-13.7470
chr5	31438548	31438564	antisense	Gm15469	.	ENSMUSG00000085493	ProperStrand	17	chr11	62416951	62417012	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-8.5754
chr14	58197577	58197596	LTR	MT2B	ERVL	chr14MT2B58197502	NonProperStrand	1	chr3	94869356	94869419	protein_coding	Pip5k1a	exon	ENSMUSG00000028126	ProperStrand	47	1	-inf
chr13	23830707	23830756	protein_coding	Hist1h1c	utr5	ENSMUSG00000036181	ProperStrand	99	chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-6.8650
chr1	172680885	172680901	protein_coding	Atf6	intron	ENSMUSG00000026663	ProperStrand	35	chr14	122863574	122863592	protein_coding	Zic5	exon	ENSMUSG00000041703	NonProperStrand	1	1	-inf
chr9	78023124	78023151	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr12	111931063	111931300	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	1	-1.3755
chr7	74189892	74189909	protein_coding	Adamts17	intron	ENSMUSG00000058145	NonProperStrand	73	chr4	116826699	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-6.3932
chr1	155098761	155098841	protein_coding	Lamc1	intron	ENSMUSG00000026478	NonProperStrand	12	chr1	155029797	155029887	protein_coding	Lamc2	intron	ENSMUSG00000026479	ProperStrand	4	1	-20.4237
chr11	115885731	115885791	protein_coding	H3f3b	utr5	ENSMUSG00000016559	ProperStrand	76	chr19	8800364	8800454	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-3.0997
chr2	129998678	129998715	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr7	117163167	117163185	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-1.5103
chr4	102651222	102651312	antisense	Gm12709	.	ENSMUSG00000085181	NonProperStrand	1	chr5	19509189	19509279	protein_coding	Magi2	intron	ENSMUSG00000040003	ProperStrand	49	1	-inf
chrX	84425224	84425240	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	ProperStrand	18	chr4	122264167	122264184	pseudogene	Gm12877	.	ENSMUSG00000081377	NonProperStrand	16	1	-18.6387
chr1	195129676	195129697	protein_coding	Lamb3	utr5	ENSMUSG00000026639	ProperStrand	4	chr4	131865868	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.0048
chr19	3464631	3464654	protein_coding	Ppp6r3	exon	ENSMUSG00000024908	ProperStrand	63	chr9	120039557	120039657	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-5.5439
chr4	53873606	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	chr11	116938556	116938663	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-2.2030
chr4	120225613	120234013	protein_coding	Ctps	exon	ENSMUSG00000028633	NonProperStrand	24	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	4	-16.6429
chr15	39673474	39673490	protein_coding	Dpys	exon	ENSMUSG00000022304	ProperStrand	27	chr2	130103751	130103781	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-10.0819
chrX	96638944	96638961	lincRNA	Gm14812	intron	ENSMUSG00000073051	NonProperStrand	13	chr4	131865856	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.5141
chr11	83311560	83311612	protein_coding	Taf15	intron	ENSMUSG00000020680	ProperStrand	60	chr4	131908254	131908344	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-5.9826
chr12	55168916	55168932	protein_coding	Npas3	exon	ENSMUSG00000021010	ProperStrand	15	chr18	35716788	35716805	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.7126
chr15	82725599	82725637	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	chr17	13112490	13112533	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	3	-2.4366
chr19	7029571	7029768	protein_coding	Plcb3	exon	ENSMUSG00000024960	ProperStrand	111	chr19	11015616	11015632	protein_coding	Gpr44	exon	ENSMUSG00000034117	NonProperStrand	118	1	-10.7194
chr2	8759556	8759573	LINE	Lx	L1	chr2Lx8759488	ProperStrand	36	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.5578
chr19	6261807	6261824	protein_coding	Atg2a	exon	ENSMUSG00000024773	ProperStrand	97	chr5	121655032	121655130	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.8751
chr16	87785408	87785430	protein_coding	2810407A14Rik	intron	ENSMUSG00000055972	ProperStrand	1	chr6	71832550	71832616	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-inf
chr10	127428422	127428438	protein_coding	Hsd17b6	exon	ENSMUSG00000025396	NonProperStrand	68	chr17	39985662	39985762	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-5.6865
chr11	42440243	42440259	protein_coding	Gabrb2	exon	ENSMUSG00000007653	ProperStrand	248	chr7	36389246	36390805	protein_coding	Ankrd27	exon	ENSMUSG00000034867	ProperStrand	132	1	-8.8881
chr2	24825186	24827046	protein_coding	Wdr85	exon	ENSMUSG00000026975	ProperStrand	323	chr19	8800355	8800421	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-0.8697
chr17	12898700	12902268	protein_coding	Igf2r	exon	ENSMUSG00000023830	ProperStrand	151	chr16	23111372	23111432	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-1.2934
chr19	46381491	46381861	protein_coding	Nfkb2	exon	ENSMUSG00000025225	ProperStrand	12	chr4	131908356	131908414	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.2270
chr9	65049529	65049619	snRNA	ENSMUSG00000075930_U5	.	ENSMUSG00000075930	ProperStrand	175	chr11	68886949	68887029	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	4	-8.2216
chr1	75181702	75181748	protein_coding	Atg9a	exon	ENSMUSG00000033124	ProperStrand	17	chr8	74022294	74030741	protein_coding	Plvap	utr3	ENSMUSG00000034845	ProperStrand	27	1	-17.3761
chr2	151319991	151320041	protein_coding	Nsfl1c	utr5	ENSMUSG00000027455	ProperStrand	6	chr4	107532648	107533752	protein_coding	Lrp8	exon	ENSMUSG00000028613	ProperStrand	9	2	-18.9979
chr4	95564317	95564334	protein_coding	Fggy	intron	ENSMUSG00000028573	NonProperStrand	15	chr4	121870894	122132509	pseudogene	Gm12896	.	ENSMUSG00000083558	NonProperStrand	19	1	-18.9281
chr3	66100724	66100740	protein_coding	Veph1	utr5	ENSMUSG00000027831	NonProperStrand	92	chr15	37943312	37944704	protein_coding	Ubr5	exon	ENSMUSG00000037487	ProperStrand	258	1	-9.5313
chr5	129308507	129308524	protein_coding	Rimbp2	intron	ENSMUSG00000029420	NonProperStrand	19	chr12	17553062	17553088	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-7.3736
chr17	30772308	30772324	protein_coding	Dnahc8	utr5	ENSMUSG00000033826	ProperStrand	246	chr19	8799582	8799635	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-4.0324
chr2	38579136	38579176	protein_coding	Nr6a1	utr3	ENSMUSG00000063972	ProperStrand	52	chr4	131908236	131908300	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.6297
chr13	85896592	85896682	LINE	Lx2	L1	chr13Lx285895873	NonProperStrand	2	chr3	37150286	37150366	LINE	Lx2B	L1	chr3Lx2B37149925	NonProperStrand	1	1	-inf
chr7	108544994	108545011	protein_coding	Arap1	intron	ENSMUSG00000032812	ProperStrand	23	chr4	131908240	131908297	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.9964
chr13	112546312	112546412	protein_coding	Map3k1	exon	ENSMUSG00000021754	ProperStrand	113	chr6	45494576	45494594	protein_coding	Cntnap2	intron	ENSMUSG00000039419	NonProperStrand	283	1	-8.9355
chr13	95247000	95249698	protein_coding	Ap3b1	utr3	ENSMUSG00000021686	ProperStrand	96	chr16	23111453	23111498	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	9	-11.7469
chr3	100750650	100750740	protein_coding-noncoding	Ttf2	utr3	ENSMUSG00000033222	ProperStrand	24	chr4	131908276	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.9196
chr5	24071480	24071560	protein_coding	Abcf2	utr3	ENSMUSG00000028953	ProperStrand	50	chr7	26416177	26416437	protein_coding	Bckdha	exon	ENSMUSG00000060376	ProperStrand	14	1	-16.7298
chr2	90235294	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	23151876	23151893	protein_coding	Srpk2	intron	ENSMUSG00000062604	NonProperStrand	38	1	-5.3470
chr10	4741155	4741171	protein_coding	Myct1	utr3	ENSMUSG00000046916	ProperStrand	42	chr7	52713409	52713457	protein_coding	Ftl1	utr3	ENSMUSG00000050708	ProperStrand	807	1	-8.8324
chr4	141140736	141145258	protein_coding	Fblim1	exon	ENSMUSG00000006219	ProperStrand	26	chrX	71517837	71517908	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	2	-13.1357
chr10	79521385	79521436	protein_coding	Sbno2	exon	ENSMUSG00000035673	ProperStrand	23	chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	1	-13.3746
chr17	56861445	56861508	protein_coding	Ndufa11	exon	ENSMUSG00000002379	ProperStrand	17	chrX	71517834	71517924	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-9.0854
chr8	67881439	67881456	LTR	MTEa-int	MaLR	chr8MTEa-int67880462	ProperStrand	39	chr1	162965531	162965588	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.0770
chr7	30892130	30892168	protein_coding	Zfp260	utr3	ENSMUSG00000049421	ProperStrand	7	chr19	8799829	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-9.3077
chr14	15572352	15572368	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-4.9431
chr3	79736688	79736762	protein_coding	Fam198b	intron	ENSMUSG00000027955	ProperStrand	9	chr4	99577397	99577413	protein_coding	Itgb3bp	intron	ENSMUSG00000028549	ProperStrand	55	2	-19.8484
chr2	37206527	37206579	protein_coding	Pdcl	utr3	ENSMUSG00000009030	ProperStrand	32	chr6	97112810	97112854	snoRNA	ENSMUSG00000065728_SNORA36	.	ENSMUSG00000065728	ProperStrand	158	2	-19.2552
chr12	88057835	88057880	protein_coding	Angel1	intron	ENSMUSG00000021257	ProperStrand	12	chr16	23110887	23110977	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-6.8317
chr2	17820799	17820820	LTR	RMER17B	ERVK	chr2RMER17B17820402	NonProperStrand	1	chr5	115940293	115940382	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	1	-inf
chr7	136746433	136746518	protein_coding	Wdr11	intron	ENSMUSG00000042055	ProperStrand	24	chr19	8799054	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-7.6593
chr5	150026396	150026456	protein_coding	Uspl1	exon	ENSMUSG00000041264	ProperStrand	20	chr16	43886825	43886925	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	1	-10.2956
chr15	76461360	76461439	protein_coding	Tonsl	exon	ENSMUSG00000059323	ProperStrand	8	chr18	35716698	35716762	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-5.9895
chr15	36527792	36527867	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr11	106362339	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-1.0943
chr17	83615339	83615355	protein_coding	Pkdcc	utr5	ENSMUSG00000024247	ProperStrand	1	chr18	33954875	33954943	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-inf
chr16	55966547	55967182	protein_coding	Rpl24	exon	ENSMUSG00000022601	ProperStrand	149	chr15	79908938	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	14	-inf
chr12	84935018	84935109	protein_coding	Zfyve1	intron	ENSMUSG00000042628	ProperStrand	28	chr5	121655016	121655061	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	5	-26.8279
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr7	138264148	138264165	protein_coding	Dmbt1	intron	ENSMUSG00000047517	ProperStrand	11	1	-9.3335
chr2	94209491	94209555	protein_coding	Ttc17	utr5	ENSMUSG00000027194	ProperStrand	13	chr16	35932620	35932636	protein_coding	Dtx3l	exon	ENSMUSG00000049502	ProperStrand	152	1	-14.5718
chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	chr4	116828259	116828665	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	1	-5.2719
chr7	118199097	118199123	protein_coding	Ctr9	exon	ENSMUSG00000005609	ProperStrand	21	chr5	67725848	67725898	protein_coding	Slc30a9	exon	ENSMUSG00000029221	ProperStrand	14	2	-inf
chr15	57721647	57721737	protein_coding	Derl1	intron	ENSMUSG00000022365	ProperStrand	7	chr15	98356805	98356885	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	1	-12.1702
chr7	107603277	107603300	protein_coding	C2cd3	exon	ENSMUSG00000047248	ProperStrand	11	chr17	24857750	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-9.1031
chr15	99831285	99831375	protein_coding	Larp4	exon	ENSMUSG00000023025	ProperStrand	41	chr5	111121070	111121150	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-7.1916
chr9	59516824	59518525	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr7	117189924	117190062	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	9	-2.1766
chr9	62644343	62644443	protein_coding	Fem1b	exon	ENSMUSG00000032244	NonProperStrand	2	chr6	34855125	34855141	protein_coding	Wdr91	intron	ENSMUSG00000058486	NonProperStrand	2	2	-inf
chr18	77312571	77312649	protein_coding	Pias2	intron	ENSMUSG00000025423	ProperStrand	52	chr16	23111776	23111798	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.1343
chr12	82047608	82047663	protein_coding	Srsf5	exon	ENSMUSG00000021134	ProperStrand	68	chr15	63839062	63839094	protein_coding	Fam49b	intron	ENSMUSG00000022378	ProperStrand	33	1	-14.2606
chr2	38280204	38280223	lincRNA	Gm13589	intron	ENSMUSG00000085950	NonProperStrand	31	chr15	79913288	79913332	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.8473
chr4	53873613	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	chr2	144087382	144087463	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	3	-6.6286
chr1	107253134	107253151	protein_coding	Rnf152	utr5	ENSMUSG00000047496	ProperStrand	2	chr19	4739318	4739336	protein_coding	Spnb3	intron	ENSMUSG00000067889	ProperStrand	19	1	-inf
chr18	78012784	78014524	protein_coding	Atp5a1	utr5	ENSMUSG00000025428	ProperStrand	254	chr9	15118335	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-2.1844
chr15	99329179	99329195	protein_coding	Faim2	utr3	ENSMUSG00000023011	ProperStrand	45	chr11	68886963	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	2	-7.7906
chr1	65280314	65280331	protein_coding	Pikfyve	exon	ENSMUSG00000025949	ProperStrand	59	chr19	8963031	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.3030
chr7	127921932	127921950	protein_coding	Vwa3a	exon	ENSMUSG00000030889	ProperStrand	7	chr8	129468767	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	5	-21.0128
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr12	5442984	5443002	LTR	ORR1D1	MaLR	chr12ORR1D15442730	ProperStrand	1	1	-inf
chr7	108871327	108899779	protein_coding	Clpb	exon	ENSMUSG00000001829	ProperStrand	44	chr4	131866162	131866252	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-4.2484
chr11	48614024	48615165	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	chr4	3762227	3762280	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	3	-13.7792
chr16	35825237	35825255	protein_coding	Hspbap1	exon	ENSMUSG00000022849	ProperStrand	48	chr1	9932551	9932626	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-8.1760
chr15	12193481	12193526	protein_coding	Mtmr12	exon	ENSMUSG00000039458	ProperStrand	16	chr19	8963051	8963124	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.7073
chr3	8554929	8554976	protein_coding	Stmn2	exon	ENSMUSG00000027500	ProperStrand	16	chr16	43886798	43886838	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	1	-10.7541
chr11	8477711	8477757	protein_coding	Tns3	intron	ENSMUSG00000020422	ProperStrand	81	chr7	29136525	29136560	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.8745
chr6	11911402	11911419	protein_coding	Phf14	intron	ENSMUSG00000029629	ProperStrand	26	chr7	134734110	134734166	protein_coding	Rnf40	exon	ENSMUSG00000030816	ProperStrand	12	1	-18.1869
chr11	69002198	69002214	protein_coding	Alox8	exon	ENSMUSG00000020891	NonProperStrand	31	chr7	117166722	117166743	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	2	-9.9496
chr17	84792816	84794412	protein_coding	Thada	exon	ENSMUSG00000024251	NonProperStrand	18	chr4	131866155	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-5.9995
chr15	78939631	78939647	protein_coding	Micall1	utr5	ENSMUSG00000033039	ProperStrand	48	chr18	33954817	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-6.6114
chr7	16789442	16790778	protein_coding	Dhx34	exon	ENSMUSG00000006019	ProperStrand	11	chr19	9047537	9047592	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	2	-21.1434
chr8	125093372	125093878	protein_coding	Cdt1	exon	ENSMUSG00000006585	ProperStrand	47	chr12	60141413	60141503	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-7.3155
chr7	103852504	103852590	protein_coding	Odz4	exon	ENSMUSG00000048078	ProperStrand	93	chr9	15119361	15119397	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-4.2679
chr4	135801992	135802009	SINE	B4A	B4	chr4B4A135801842	ProperStrand	3	chr16	23110905	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-9.5778
chr19	5798611	5798645	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr6	72178971	72178988	protein_coding	Atoh8	intron	ENSMUSG00000037621	NonProperStrand	61	1	-7.5116
chr11	97643017	97643089	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	chr1	187066782	187066882	snoRNA	ENSMUSG00000077571_Snora36b	.	ENSMUSG00000077571	ProperStrand	244	7	-6.9970
chr17	34256159	34256188	protein_coding	Brd2	utr5	ENSMUSG00000024335	ProperStrand	69	chr19	8963082	8963179	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.0449
chr12	110881086	110881116	lincRNA	Rian	intron	ENSMUSG00000091793	ProperStrand	612	chr14	118996797	118998593	protein_coding	Abcc4	exon	ENSMUSG00000032849	ProperStrand	137	1	-7.0217
chr6	115758045	115758118	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr13	21367858	21367899	tRNA	tRNA73-ThrTGT	.	1405207	ProperStrand	5	2	-16.9434
chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	2	-7.2660
chr11	99076449	99076465	protein_coding	Smarce1	exon	ENSMUSG00000037935	NonProperStrand	8	chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	1	-15.8164
chr2	158185537	158185666	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr7	16524110	16524129	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	1	-3.0693
chr11	116535915	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr19	36967018	36967118	protein_coding	Tnks2	utr3	ENSMUSG00000024811	ProperStrand	133	1	-4.3705
chr13	22303925	22304005	LTR	MTA_Mm-int	MaLR	chr13MTA_Mm-int22303135	NonProperStrand	1	chr3	40506689	40506779	protein_coding	Intu	utr3	ENSMUSG00000060798	ProperStrand	4	1	-inf
chr12	32882105	32882121	protein_coding	Pik3cg	exon	ENSMUSG00000020573	ProperStrand	12	chr12	52903711	52904686	protein_coding	Hectd1	exon	ENSMUSG00000035247	ProperStrand	41	2	-inf
chr8	64017614	64028377	protein_coding	Palld	exon	ENSMUSG00000058056	NonProperStrand	125	chr11	97642952	97643008	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-3.9707
chr9	95394209	95396261	protein_coding	2610101N10Rik	exon	ENSMUSG00000032407	ProperStrand	56	chr19	8963083	8963173	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.3909
chr15	34372823	34372968	protein_coding	Rpl30	utr5	ENSMUSG00000058600	ProperStrand	65	chr10	60692417	60692433	protein_coding	Adamts14	exon	ENSMUSG00000059901	NonProperStrand	127	1	-11.6469
chr15	44471856	44471902	protein_coding	Ebag9	exon	ENSMUSG00000022339	ProperStrand	3	chr14	76140863	76140890	protein_coding	Cog3	intron	ENSMUSG00000034893	ProperStrand	37	2	-24.3580
chr6	88053887	88053921	protein_coding	Rpn1	utr3	ENSMUSG00000030062	ProperStrand	58	chr4	131908686	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-3.8795
chr6	22258372	22258411	protein_coding	Fam3c	utr3	ENSMUSG00000029672	ProperStrand	13	chr4	131865855	131865926	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-7.6072
chr8	108370934	108370969	protein_coding	Cenpt	exon	ENSMUSG00000036672	ProperStrand	13	chr4	131865888	131865988	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-11.0776
chr13	3884225	3885373	protein_coding	Net1	exon	ENSMUSG00000021215	ProperStrand	32	chr6	115758051	115758131	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-6.7146
chr2	3371513	3371559	protein_coding	Dclre1c	intron	ENSMUSG00000026648	ProperStrand	8	chr5	124567289	124567396	protein_coding	Arl6ip4	exon	ENSMUSG00000029404	ProperStrand	29	1	-18.9546
chr2	35584742	35584832	protein_coding	Dab2ip	utr3	ENSMUSG00000026883	ProperStrand	93	chr3	68889152	68889220	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	11	-20.1895
chr1	183023712	183023812	protein_coding	Nvl	utr3	ENSMUSG00000026516	ProperStrand	89	chr9	15119646	15119712	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.9712
chr7	134110716	134111233	protein_coding	Sez6l2	exon	ENSMUSG00000030683	ProperStrand	94	chr7	140263231	140263258	protein_coding	Ctbp2	intron	ENSMUSG00000030970	ProperStrand	89	1	-11.6188
chr4	148494139	148494156	protein_coding	Dffa	utr3	ENSMUSG00000028974	ProperStrand	55	chr3	68889026	68889126	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	13	-19.0845
chr19	44375705	44375805	protein_coding	Scd2	exon	ENSMUSG00000025203	ProperStrand	219	chr14	33005085	33005139	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-1.7428
chr10	84410435	84410467	protein_coding	Ric8b	exon	ENSMUSG00000035620	ProperStrand	5	chr14	76247748	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	3	-18.7556
chr5	65952377	65952395	protein_coding	Ube2k	intron	ENSMUSG00000029203	ProperStrand	289	chr10	110918559	110918693	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	4	-4.4454
chr2	180639716	180639734	protein_coding	Ythdf1	utr3	ENSMUSG00000038848	ProperStrand	59	chr18	33954845	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	3	-8.7937
chr2	145077954	145209255	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	chr7	106631327	106631400	snoRNA	ENSMUSG00000065822_Snord15a	.	ENSMUSG00000065822	ProperStrand	128	1	-6.2218
chr2	134469526	134469543	protein_coding-noncoding	Tmx4	utr3	ENSMUSG00000034723	NonProperStrand	9	chr8	129460982	129461052	protein_coding	Tomm20	exon	ENSMUSG00000058779	ProperStrand	55	1	-17.3035
chr8	86451687	86451713	protein_coding	Lphn1	intron	ENSMUSG00000013033	ProperStrand	221	chrX	49782109	49782209	protein_coding	Gpc3	exon	ENSMUSG00000055653	ProperStrand	43	1	-11.3706
chr15	76174896	76175035	protein_coding	Cyc1	exon	ENSMUSG00000022551	ProperStrand	47	chr13	96100595	96100694	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	1	-8.5576
chr5	134970089	134970125	protein_coding	Clip2	exon	ENSMUSG00000063146	ProperStrand	35	chr7	116663715	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-8.7122
chr9	123541402	123541418	protein_coding	Slc6a20b	exon	ENSMUSG00000025243	ProperStrand	16	chr19	9004433	9005295	protein_coding	Eml3	exon	ENSMUSG00000071647	ProperStrand	19	1	-18.2794
chr4	155545655	155545697	protein_coding	Agrn	exon	ENSMUSG00000041936	ProperStrand	175	chr16	23110549	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-0.8805
chr4	123089086	123089155	protein_coding	Macf1	intron	ENSMUSG00000028649	ProperStrand	320	chr19	8800355	8800445	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-0.8807
chr6	4705876	4709719	protein_coding	Peg10	exon	ENSMUSG00000092035	ProperStrand	102	chr16	23111445	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-1.3231
chr9	21114098	21114198	protein_coding	Ap1m2	exon	ENSMUSG00000003309	ProperStrand	1	chr10	23505152	23505215	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-inf
chr9	64025280	64025705	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	chr8	46111312	46111392	protein_coding	Fat1	exon	ENSMUSG00000070047	ProperStrand	306	3	-12.6760
chr11	120421979	120422089	protein_coding	P4hb	utr3	ENSMUSG00000025130	ProperStrand	83	chr17	24856620	24856638	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-5.7883
chr8	116041186	116041203	LTR	ORR1A2	MaLR	chr8ORR1A2116041073	NonProperStrand	4	chr18	63238392	63238408	protein_coding	Fam38b	exon	ENSMUSG00000041482	NonProperStrand	50	1	-18.8519
chr2	158184091	158184181	snoRNA	ENSMUSG00000064995_SNORA71	.	ENSMUSG00000064995	ProperStrand	430	chr14	76247734	76247814	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-0.9408
chr11	86065768	86065828	protein_coding	Ints2	exon	ENSMUSG00000018068	ProperStrand	17	chr4	116991015	116991036	protein_coding	Rnf220	intron	ENSMUSG00000028677	ProperStrand	131	1	-14.3129
chr2	69860010	69860070	protein_coding	Ubr3	utr3	ENSMUSG00000044308	NonProperStrand	12	chr11	101466282	101466351	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	NonProperStrand	3	2	-inf
chr2	90235315	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr13	68759738	68764669	protein_coding	Adcy2	exon	ENSMUSG00000021536	ProperStrand	237	2	-3.6220
chr14	114678676	114678766	LINE	Lx5	L1	chr14Lx5114678457	NonProperStrand	1	chr14	114678874	114678954	LTR	ORR1A2	MaLR	chr14ORR1A2114678821	ProperStrand	1	1	-inf
chr11	60370859	60370949	protein_coding	Alkbh5	utr3	ENSMUSG00000042650	ProperStrand	203	chr10	110918549	110918629	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-1.4182
chr10	107769295	107769750	protein_coding	Pawr	utr5	ENSMUSG00000035873	NonProperStrand	3	chr1	89681249	89681349	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-11.7607
chr13	9833552	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr11	60599515	60599554	protein_coding	Smcr8	utr3	ENSMUSG00000049323	ProperStrand	46	3	-12.7739
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr7	25300469	25300485	protein_coding	Zfp428	exon	ENSMUSG00000064264	ProperStrand	23	1	-9.6725
chr1	167507365	167507455	LTR	RMER5	ERV1	chr1RMER5167507261	ProperStrand	1	chr5	34499521	34499601	protein_coding	Haus3	intron	ENSMUSG00000079555	ProperStrand	2	1	-inf
chr9	54751929	54751996	protein_coding	Ireb2	exon	ENSMUSG00000032293	ProperStrand	45	chr10	23505174	23505264	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-3.0673
chr6	56799637	56799697	protein_coding	Fkbp9	exon	ENSMUSG00000029781	ProperStrand	39	chr14	31827478	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-7.8050
chr7	52382059	52382149	protein_coding-noncoding	Rpl13a	utr3	ENSMUSG00000074129	ProperStrand	106	chr7	29136525	29136601	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.4671
chr7	117189864	117189909	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr2	150093722	150093740	protein_coding	Gm14124	exon	ENSMUSG00000079008	ProperStrand	1	1	-inf
chr1	44028574	44029387	protein_coding	Tpp2	exon	ENSMUSG00000041763	ProperStrand	22	chr2	38857208	38857276	protein_coding	Rpl35	exon	ENSMUSG00000062997	ProperStrand	68	1	-15.0872
chr6	29325300	29325360	protein_coding	Calu	utr3	ENSMUSG00000029767	ProperStrand	47	chr11	77995188	77995218	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-6.6663
chr3	52388277	52388294	SINE	B4A	B4	chr3B4A52388218	ProperStrand	169	chr17	35987954	35987979	protein_coding	Mdc1	intron	ENSMUSG00000061607	ProperStrand	85	1	-10.5355
chr3	96654255	96654271	protein_coding	Pdzk1	exon	ENSMUSG00000038298	ProperStrand	101	chr10	80484546	80484590	protein_coding	Diras1	utr3	ENSMUSG00000043670	ProperStrand	1	1	-inf
chr9	110843164	110843251	protein_coding	Tdgf1	utr3	ENSMUSG00000032494	ProperStrand	218	chr2	26494708	26494800	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	5	-6.4657
chr4	117811168	117811476	protein_coding	Kdm4a	exon	ENSMUSG00000033326	ProperStrand	81	chr17	24857716	24857775	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.8110
chrX	71589885	71589908	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr1	162967501	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	8	-11.5259
chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	chr9	62705194	62705211	pseudogene	Gm10653	.	ENSMUSG00000074250	NonProperStrand	15	1	-14.5069
chr19	44369640	44380524	protein_coding	Scd2	exon	ENSMUSG00000025203	ProperStrand	219	chr14	76247727	76247828	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-3.4334
chr10	40079395	40079412	protein_coding	Cdk19	intron	ENSMUSG00000038481	ProperStrand	34	chr9	15119713	15119766	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.6547
chr6	124986896	124986924	protein_coding	Zfp384	utr3	ENSMUSG00000038346	ProperStrand	3	chr7	116664797	116664887	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-8.6415
chr9	119488137	119488159	Simple_repeat	(CGGGGG)n	Simple_repeat	chr9(CGGGGG)n119488141	ProperStrand	1	chr4	131908236	131908347	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-inf
chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	chr3	108357263	108357331	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-1.0834
chr11	104990198	104990218	protein_coding	Mettl2	exon	ENSMUSG00000020691	ProperStrand	21	chr1	59761638	59761716	snoRNA	ENSMUSG00000089093_Snord11	.	ENSMUSG00000089093	ProperStrand	193	2	-20.2578
chr4	43526329	43526362	protein_coding	Car9	utr3	ENSMUSG00000028463	NonProperStrand	35	chr11	116704532	116704550	protein_coding	Jmjd6	utr5	ENSMUSG00000056962	ProperStrand	92	1	-13.5447
chr15	36538316	36538397	protein_coding	Pabpc1	utr5	ENSMUSG00000022283	ProperStrand	908	chr17	27559700	27559717	protein_coding	Grm4	utr3	ENSMUSG00000063239	ProperStrand	147	1	-6.1075
chr5	124757052	124762810	protein_coding	Mphosph9	exon	ENSMUSG00000038126	ProperStrand	23	chr9	15119734	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.3979
chr19	11015616	11015632	protein_coding	Gpr44	exon	ENSMUSG00000034117	NonProperStrand	118	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.1050
chr7	134461634	134461734	protein_coding	Itgal	intron	ENSMUSG00000030830	ProperStrand	38	chr7	116664869	116664913	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.3626
chr1	77384470	77384501	protein_coding	Epha4	exon	ENSMUSG00000026235	ProperStrand	57	chr1	34870309	34870409	protein_coding	Fam168b	utr3	ENSMUSG00000037503	ProperStrand	23	1	-15.3338
chr8	90640620	90640640	lincRNA	Gm2716	intron	ENSMUSG00000086208	NonProperStrand	2	chr19	42194435	42194461	protein_coding	Pi4k2a	utr3	ENSMUSG00000025178	ProperStrand	23	1	-20.4378
chr5	34112034	34112050	protein_coding	Letm1	exon	ENSMUSG00000005299	NonProperStrand	145	chr5	115939533	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-6.1172
chr14	31018766	31018786	protein_coding	Cacna1d	intron	ENSMUSG00000015968	NonProperStrand	12	chr19	10696580	10696627	protein_coding	Ddb1	exon	ENSMUSG00000024740	ProperStrand	304	1	-13.3444
chr7	128076833	128076849	protein_coding	Polr3e	exon	ENSMUSG00000030880	NonProperStrand	2	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-8.7800
chr18	61715369	61715387	protein_coding	Csnk1a1	utr5	ENSMUSG00000024576	NonProperStrand	35	chr11	6428088	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.1952
chr5	100855902	100855956	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr4	120542777	120542843	protein_coding	Rims3	intron	ENSMUSG00000032890	ProperStrand	18	3	-20.0828
chr17	34023739	34023829	protein_coding	Kifc1	exon	ENSMUSG00000079553	ProperStrand	47	chr1	162967537	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	3	-9.6222
chr2	136711250	136711266	protein_coding	Mkks	utr5	ENSMUSG00000027274	NonProperStrand	2	chr10	107800824	107800856	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	1	-15.5518
chr10	80642479	80642654	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr12	60141377	60141457	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	7	-7.5687
chr12	39229089	39229108	protein_coding	Dgkb	intron	ENSMUSG00000036095	ProperStrand	19	chr2	158185530	158185616	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-8.7972
chr7	38485201	38485218	protein_coding	Zfp536	intron	ENSMUSG00000043456	NonProperStrand	236	chr1	161270414	161270444	snoRNA	ENSMUSG00000089536_Scarna3a	.	ENSMUSG00000089536	ProperStrand	247	1	-7.7395
chr1	158563260	158563360	protein_coding	Abl2	exon	ENSMUSG00000026596	ProperStrand	37	chr12	78021619	78021635	protein_coding	Fntb	utr3	ENSMUSG00000033373	NonProperStrand	8	1	-18.0556
chr11	97889682	97889741	protein_coding	Rpl19	exon	ENSMUSG00000017404	ProperStrand	120	chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	1	-7.8027
chr8	91106344	91106360	protein_coding	Nkd1	intron	ENSMUSG00000031661	ProperStrand	57	chr7	52382752	52382832	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-6.8537
chr4	131865856	131865980	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr7	16524109	16524219	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	4	-0.7677
chr7	53089954	53089976	protein_coding	Grin2d	intron	ENSMUSG00000002771	NonProperStrand	31	chr18	35716832	35716883	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-5.7159
chr17	37146881	37146961	protein_coding	Zfp57	exon	ENSMUSG00000036036	ProperStrand	39	chr1	194571790	194571880	snRNA	ENSMUSG00000064881_U5	.	ENSMUSG00000064881	ProperStrand	187	1	-11.9022
chr1	115800676	115800701	lincRNA	9330185C12Rik	intron	ENSMUSG00000086520	ProperStrand	45	chr6	140489644	140489663	protein_coding	Plekha5	intron	ENSMUSG00000030231	ProperStrand	33	1	-15.0882
chr11	45723144	45723160	protein_coding	Clint1	utr3	ENSMUSG00000006169	NonProperStrand	273	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-1.8094
chr12	19990175	19990265	LINE	L1MC1	L1	chr12L1MC119990201	ProperStrand	1	chr2	32818802	32818887	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-inf
chr7	52714019	52714495	protein_coding	Ftl1	exon	ENSMUSG00000050708	ProperStrand	807	chr7	111381179	111381210	protein_coding	Trim6	exon	ENSMUSG00000072244	ProperStrand	40	2	-14.1865
chr2	84697517	84697534	protein_coding	Slc43a1	exon	ENSMUSG00000027075	ProperStrand	5	chr4	131865855	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-6.5022
chr17	31486919	31486972	protein_coding	Slc37a1	utr3	ENSMUSG00000024036	ProperStrand	17	chr9	58049178	58049773	protein_coding	Islr2	utr5	ENSMUSG00000051243	ProperStrand	14	1	-22.5166
chr2	25105521	25107254	protein_coding	Ndor1	exon	ENSMUSG00000006471	NonProperStrand	84	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-8.2533
chr7	52713439	52713488	protein_coding	Ftl1	utr3	ENSMUSG00000050708	ProperStrand	807	chr6	94776857	94776875	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	3	-9.7207
chr5	20433547	20457164	protein_coding	Rsbn1l	exon	ENSMUSG00000039968	ProperStrand	17	chrX	84483703	84483742	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	2	-17.1376
chr6	125231092	125231143	protein_coding	Tuba3a	exon	ENSMUSG00000067702	ProperStrand	405	chr1	74902715	74902731	protein_coding	Cdk5r2	exon	ENSMUSG00000090071	NonProperStrand	49	1	-9.8962
chr13	98699388	98699465	protein_coding	Rgnef	utr3	ENSMUSG00000021662	ProperStrand	30	chr1	162967512	162967566	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.7879
chr4	75094306	75094322	LINE	Lx9	L1	chr4Lx975094037	ProperStrand	41	chr5	108336378	108336487	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-9.2025
chr2	150763306	150814431	protein_coding	Ninl	exon	ENSMUSG00000068115	ProperStrand	51	chr3	123210854	123210971	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-6.2691
chr12	113067327	113067417	protein_coding	Ppp1r13b	utr3	ENSMUSG00000021285	ProperStrand	8	chr10	23505199	23505279	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.7871
chr15	10502146	10504067	protein_coding	Rai14	exon	ENSMUSG00000022246	ProperStrand	180	chr4	131908236	131908357	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	8	-6.0686
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr1	75132866	75132884	protein_coding	1810031K17Rik	utr3	ENSMUSG00000033159	ProperStrand	24	1	-8.7648
chr13	53205460	53205534	protein_coding	Ror2	utr3	ENSMUSG00000021464	ProperStrand	46	chr2	30181998	30182016	protein_coding	Nup188	exon	ENSMUSG00000052533	ProperStrand	96	4	-19.6455
chr8	23763839	23763856	protein_coding	Polb	utr5	ENSMUSG00000031536	ProperStrand	23	chr15	34370631	34370675	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-8.8765
chr9	40612016	40612328	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr7	4759831	4759856	protein_coding	Ube2s	exon	ENSMUSG00000060860	ProperStrand	62	3	-18.2171
chr17	46663594	46663610	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	mmu-miR-709	3	19	miRNA	mmu-miR-709	.	mmu-miR-709	ProperStrand	20	1	-11.4555
chr2	168581294	168581393	protein_coding	Sall4	exon	ENSMUSG00000027547	ProperStrand	82	chr16	23110456	23110526	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-3.5309
chr11	119136228	119136244	protein_coding	Gaa	exon	ENSMUSG00000025579	NonProperStrand	201	chr7	107007342	107007390	protein_coding	Spcs2	utr5	ENSMUSG00000035227	ProperStrand	17	1	-13.4504
chr4	98736928	98737003	protein_coding	Dock7	exon	ENSMUSG00000028556	ProperStrand	20	chr4	131908688	131908753	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-7.8128
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr18	75161533	75161584	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-1.4503
chr8	73920871	73920887	protein_coding	5430437P03Rik	utr5	ENSMUSG00000031820	NonProperStrand	8	chr4	41096036	41096059	protein_coding	Ube2r2	intron	ENSMUSG00000036241	ProperStrand	19	2	-19.1859
chr16	93832396	93832412	protein_coding	Morc3	utr5	ENSMUSG00000039456	NonProperStrand	33	chr10	23505254	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.1417
chr11	101429735	101434233	protein_coding	Nbr1	exon	ENSMUSG00000017119	ProperStrand	91	chr1	162965539	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-6.6745
chr10	88412381	88412399	protein_coding	Ano4	utr3	ENSMUSG00000035189	ProperStrand	21	chr1	162967490	162967537	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-5.4889
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr18	33954817	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-3.3549
chr2	26493363	26493514	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr5	108336363	108336447	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	4	-0.7144
chr2	38857131	38857190	protein_coding	Rpl35	utr3	ENSMUSG00000062997	ProperStrand	68	chr1	162966009	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	3	-8.4453
chr15	102301010	102301100	lincRNA	Gm17403	intron	ENSMUSG00000090630	NonProperStrand	10	chr9	59516866	59518313	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	1	-10.8284
chr2	26320896	26320996	protein_coding	Notch1	exon	ENSMUSG00000026923	ProperStrand	145	chr2	130103454	130103503	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-6.3126
chr8	74148321	74148372	protein_coding	Glt25d1	utr3	ENSMUSG00000034807	ProperStrand	36	chr12	110918201	110918221	snoRNA	ENSMUSG00000065749_AF357428	.	ENSMUSG00000065749	ProperStrand	218	1	-11.7576
chr17	28467907	28467931	protein_coding	Rpl10a	exon	ENSMUSG00000037805	ProperStrand	121	chr7	118219574	118219621	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-2.8838
chr17	34983149	34983202	protein_coding-noncoding	Skiv2l	utr3	ENSMUSG00000040356	ProperStrand	1	chr17	24857817	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-inf
chr2	38280204	38280223	lincRNA	Gm13589	intron	ENSMUSG00000085950	NonProperStrand	31	chr13	55105923	55105939	protein_coding	Unc5a	exon	ENSMUSG00000025876	NonProperStrand	96	1	-13.7011
chr3	104295655	104295673	protein_coding	Lrig2	exon	ENSMUSG00000032913	ProperStrand	10	chr2	181316563	181316579	protein_coding	Uckl1	exon	ENSMUSG00000089917	ProperStrand	142	1	-15.2601
chr1	53046806	53046826	LTR	LTR86A1	ERVL	chr1LTR86A153046784	NonProperStrand	3	chr4	122970413	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	3	-inf
chr2	166881666	166881682	protein_coding	Znfx1	exon	ENSMUSG00000039501	ProperStrand	32	chr7	116663674	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	4	-12.1930
chr11	35621948	35622048	protein_coding	Rars	utr3	ENSMUSG00000018848	ProperStrand	18	chr14	117706272	117706292	protein_coding	Gpc6	intron	ENSMUSG00000058571	NonProperStrand	31	1	-16.9000
chr2	172957825	172957841	antisense	1300015D01Rik	.	ENSMUSG00000087382	ProperStrand	34	chr15	101914600	101914715	protein_coding	Eif4b	exon	ENSMUSG00000058655	ProperStrand	484	2	-16.1455
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr17	13112509	13112580	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-0.9327
chr8	83235661	83237889	protein_coding	Smarca5	exon	ENSMUSG00000031715	ProperStrand	115	chr15	82725599	82725636	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	2	-11.5957
chr19	14805260	14805279	LTR	ORR1B2	MaLR	chr19ORR1B214805221	ProperStrand	2	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-10.9191
chr5	108336392	108336492	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	chr1	173041610	173041649	tRNA	tRNA710-ValCAC	.	94909	ProperStrand	206	2	-4.5631
chr7	37547991	37548008	protein_coding	Tshz3	intron	ENSMUSG00000021217	NonProperStrand	11	chr9	15118322	15118360	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-6.7899
chr17	35284106	35284151	protein_coding	Bag6	exon	ENSMUSG00000024392	ProperStrand	181	chrX	102052119	102052137	protein_coding	Magee2	exon	ENSMUSG00000031224	ProperStrand	3	1	-17.6648
chr1	136514387	136521293	protein_coding	Kdm5b	utr5	ENSMUSG00000042207	ProperStrand	223	chr3	123210854	123210981	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-0.9115
chr1	72272842	72272932	snRNA	ENSMUSG00000075752_U2	.	ENSMUSG00000075752	ProperStrand	535	chr15	79908930	79909020	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	2	-2.9059
chr4	126703409	126703425	protein_coding	Sfpq	exon	ENSMUSG00000028820	ProperStrand	340	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-5.4946
chr5	119192259	119192328	protein_coding	Med13l	exon	ENSMUSG00000018076	ProperStrand	226	chr17	28199124	28199142	protein_coding	Anks1	utr3	ENSMUSG00000024219	ProperStrand	32	1	-11.9233
chr7	35341729	35341819	LINE	L2a	L2	chr7L2a35341683	NonProperStrand	1	chr7	35341451	35341541	LTR	RMER19B	ERVK	chr7RMER19B35340793	NonProperStrand	1	1	-inf
chr12	102956633	102956650	protein_coding	Tc2n	utr5	ENSMUSG00000021187	ProperStrand	32	chr4	131908810	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.1812
chr8	126554155	126554189	protein_coding	Urb2	exon	ENSMUSG00000031976	ProperStrand	64	chr11	58809803	58810353	protein_coding	Obscn	exon	ENSMUSG00000061462	ProperStrand	81	1	-12.5807
chr13	96247406	96248477	protein_coding	S100z	exon	ENSMUSG00000021679	NonProperStrand	43	chr7	20005039	20005095	protein_coding	A930016O22Rik	intron	ENSMUSG00000040705	ProperStrand	7	1	-19.0659
chr6	124772550	124772640	protein_coding	Usp5	exon	ENSMUSG00000038429	ProperStrand	35	chr14	33005156	33005236	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-5.0270
mmu-miR-6238	2	20	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chrX	148354496	148354553	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	1	-6.3103
chr15	102301161	102327828	protein_coding	Pcbp2	intron	ENSMUSG00000056851	ProperStrand	164	chr7	116664794	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-2.0137
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr19	57435752	57435769	protein_coding	Fam160b1	utr5	ENSMUSG00000033478	ProperStrand	49	1	-8.9995
chr11	6428087	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr1	129228430	129228520	snoRNA	ENSMUSG00000093146_AC131793.1	.	ENSMUSG00000093146	ProperStrand	119	1	-2.0161
chr5	30975721	30975747	protein_coding	Cenpa	exon	ENSMUSG00000029177	ProperStrand	18	chr19	8799835	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-7.3371
chr17	34787949	34788049	protein_coding	Atf6b	exon	ENSMUSG00000015461	ProperStrand	11	chr6	34712316	34714958	protein_coding	Cald1	exon	ENSMUSG00000029761	ProperStrand	19	1	-18.7445
chr11	51520752	51522450	protein_coding	Sec24a	exon	ENSMUSG00000036391	ProperStrand	42	chr5	121828827	121828843	protein_coding	Trafd1	exon	ENSMUSG00000042726	ProperStrand	81	1	-13.4305
chr13	30964752	30964771	protein_coding	Exoc2	intron	ENSMUSG00000021357	NonProperStrand	4	chr4	28767420	28767436	protein_coding	Epha7	intron	ENSMUSG00000028289	NonProperStrand	3	1	-inf
chr12	74652513	74652613	LTR	RLTRETN_Mm	ERVK	chr12RLTRETN_Mm74652322	ProperStrand	9	chr9	30235085	30235103	protein_coding	Snx19	exon	ENSMUSG00000031993	ProperStrand	353	1	-13.6545
chr9	57809132	57809149	protein_coding	Sema7a	exon	ENSMUSG00000038264	ProperStrand	43	chr16	23110527	23110579	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.0458
chr2	26493433	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr5	111812088	111812105	protein_coding	Pitpnb	exon	ENSMUSG00000050017	ProperStrand	137	1	-4.5896
chr6	142319698	142319772	protein_coding	Recql	intron	ENSMUSG00000030243	NonProperStrand	3	chr9	120039624	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	3	-inf
chr10	95499367	95499383	protein_coding	Eea1	utr3	ENSMUSG00000036499	ProperStrand	82	chr16	23110466	23110491	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.9457
chr11	4918055	4918124	protein_coding	Ap1b1	exon	ENSMUSG00000009090	ProperStrand	43	chr19	8963026	8963116	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.8490
chr10	19600484	19600574	protein_coding	Pex7	intron	ENSMUSG00000020003	ProperStrand	7	chr10	23505191	23505277	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	6	-inf
chr3	23326181	23326197	LTR	RLTR9D	ERVK	chr3RLTR9D23325954	ProperStrand	21	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-12.5565
chr13	16118956	16118973	protein_coding	Inhba	utr3	ENSMUSG00000041324	NonProperStrand	4	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-14.6015
chr12	72107936	72107965	lincRNA	3110056K07Rik	intron	ENSMUSG00000085622	ProperStrand	6	chr5	122691914	122691930	protein_coding	Hvcn1	utr3	ENSMUSG00000064267	ProperStrand	182	1	-15.8336
chr9	120039626	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	chr9	64024466	64024550	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	5	-1.9145
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr4	20548793	20548811	protein_coding	Nkain3	intron	ENSMUSG00000055761	ProperStrand	34	1	-8.9357
chr8	61391767	61391783	protein_coding	BC030500	exon	ENSMUSG00000049946	NonProperStrand	12	chr4	131908689	131908750	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.9639
chr4	116838094	116838944	protein_coding	Kif2c	exon	ENSMUSG00000028678	ProperStrand	32	chr19	8798525	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-10.4611
chr17	39979943	39979979	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr9	61242484	61249744	protein_coding	Tle3	exon	ENSMUSG00000032280	ProperStrand	88	18	-19.0511
chr2	173396685	173396703	protein_coding	Ankrd60	exon	ENSMUSG00000027517	ProperStrand	5	chr9	78328407	78328460	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-11.4728
chr1	137779170	137780488	protein_coding	Pkp1	exon	ENSMUSG00000026413	ProperStrand	12	chr7	56061059	56064204	protein_coding	Zdhhc13	exon	ENSMUSG00000030471	ProperStrand	6	1	-19.9654
chr1	55064358	55064448	protein_coding	Sf3b1	exon	ENSMUSG00000025982	ProperStrand	158	chr11	69483200	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-0.9958
chr10	66718285	66718385	protein_coding	Jmjd1c	utr3	ENSMUSG00000037876	ProperStrand	110	chr8	113362432	113362472	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	1	-8.0533
chr8	124406362	124406436	protein_coding	Slc7a5	utr3	ENSMUSG00000040010	ProperStrand	166	chr3	108357255	108357355	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-2.6720
chr10	79715153	79715883	protein_coding	Ndufs7	exon	ENSMUSG00000020153	ProperStrand	15	chr10	90581059	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-7.5651
chr2	180396578	180396668	protein_coding	Dido1	exon	ENSMUSG00000038914	ProperStrand	81	chr18	35716739	35716819	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.6926
chr13	49779707	49779802	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	chr1	89673603	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	10	-2.1652
chr2	26293995	26294030	protein_coding	Sec16a	exon	ENSMUSG00000026924	ProperStrand	86	chr19	8963027	8963076	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.6982
chr10	13102389	13102407	protein_coding-noncoding	Phactr2	utr3	ENSMUSG00000062866	NonProperStrand	8	chr11	107499203	107499226	protein_coding	Helz	exon	ENSMUSG00000020721	ProperStrand	60	1	-17.4371
chrX	96245892	96245908	protein_coding	Stard8	intron	ENSMUSG00000031216	ProperStrand	142	chr5	23020470	23024253	protein_coding	Srpk2	exon	ENSMUSG00000062604	ProperStrand	51	1	-11.9120
mmu-miR-1949	0	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr15	79913288	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	3	-0.8169
chr9	109984842	109984932	protein_coding	Mtap4	utr3	ENSMUSG00000032479	ProperStrand	188	chr2	26494723	26494803	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.2611
chr15	79505322	79505421	protein_coding	Josd1	utr3	ENSMUSG00000022426	ProperStrand	13	chr9	120039567	120039624	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-6.2868
chr2	34555413	34556358	protein_coding	Gapvd1	exon	ENSMUSG00000026867	ProperStrand	31	chr11	97642952	97642973	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.6570
chr4	44692371	44692387	antisense	Gm12462	.	ENSMUSG00000086211	ProperStrand	3	chr5	74489203	74489250	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	1	-11.9465
chr2	158323962	158323985	protein_coding	Ralgapb	utr3	ENSMUSG00000027652	ProperStrand	22	chr10	23505203	23505268	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.8416
chr2	167252790	167252839	protein_coding	Slc9a8	intron	ENSMUSG00000039463	ProperStrand	26	chr4	131908260	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-7.2881
chr2	25133918	25134693	protein_coding	Anapc2	exon	ENSMUSG00000026965	ProperStrand	15	chr16	23110902	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-3.8284
chr18	35989606	35989624	protein_coding	Cxxc5	utr5	ENSMUSG00000046668	ProperStrand	30	chr5	108336392	108336495	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	4	-19.4768
chr16	23108922	23109285	protein_coding	Eif4a2	exon	ENSMUSG00000022884	ProperStrand	356	chr7	118219574	118219602	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-2.2756
chr9	119664282	119664299	protein_coding	Scn11a	exon	ENSMUSG00000034115	ProperStrand	55	chr9	15130760	15130803	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	2	-14.8394
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr4	122968664	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	3	-8.6714
chr8	41597530	41597547	protein_coding	Vps37a	exon	ENSMUSG00000031600	ProperStrand	9	chr1	162968447	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	2	-15.8465
chr2	121157379	121160160	protein_coding	Ppip5k1	exon	ENSMUSG00000033526	ProperStrand	85	chr16	57391593	57391675	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	1	-9.6064
chr10	76050040	76050060	protein_coding	Ftcd	exon	ENSMUSG00000001155	ProperStrand	2	chr3	101385748	101385775	protein_coding	Atp1a1	exon	ENSMUSG00000033161	ProperStrand	316	1	-17.5326
chr6	4707431	4707521	protein_coding	Peg10	utr3	ENSMUSG00000092035	ProperStrand	102	chr10	90581090	90581170	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-3.8009
chr19	47194041	47204706	protein_coding	Pdcd11	exon	ENSMUSG00000025047	ProperStrand	137	chr16	23110876	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	10	-3.6423
chr13	100185020	100185037	protein_coding	Mrps27	utr3	ENSMUSG00000041632	ProperStrand	21	chr2	26494763	26494829	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.0955
chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	chrX	83547356	83547372	protein_coding	Mageb4	intron	ENSMUSG00000035427	NonProperStrand	191	1	-10.2439
chr9	89980468	89980550	SINE	B3	B2	chr9B389980419	NonProperStrand	2	chr18	10792989	10794480	protein_coding	Mib1	exon	ENSMUSG00000024294	ProperStrand	27	1	-21.0126
chr14	55505577	55505714	protein_coding	Bcl2l2	utr3	ENSMUSG00000089682	ProperStrand	17	chr5	108333640	108333662	snoRNA	ENSMUSG00000064453_Snord21	.	ENSMUSG00000064453	ProperStrand	201	1	-13.4509
chr13	49557117	49557189	protein_coding	Ippk	utr3	ENSMUSG00000021385	ProperStrand	5	chr19	8798742	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-9.8951
chr8	74008400	74008417	protein_coding	Ano8	exon	ENSMUSG00000034863	NonProperStrand	171	chr10	127047404	127047481	protein_coding	Lrp1	exon	ENSMUSG00000040249	ProperStrand	151	2	-14.8061
chr16	4886395	4886411	protein_coding	Mgrn1	exon	ENSMUSG00000022517	NonProperStrand	157	chr1	162966813	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-4.3926
chr19	7348983	7349018	protein_coding	Rcor2	exon	ENSMUSG00000024968	ProperStrand	120	chr9	57104278	57104349	protein_coding	1700017B05Rik	exon	ENSMUSG00000032300	ProperStrand	22	2	-19.4660
chr10	80642134	80642192	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr2	145076803	145209249	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-1.1609
chr4	146438226	146438287	antisense	4933438K21Rik	.	ENSMUSG00000093617	NonProperStrand	2	chr11	98878376	98878466	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-13.7238
chr3	120907458	120907476	protein_coding	Tmem56	utr3	ENSMUSG00000028132	ProperStrand	30	chr5	93611738	93611786	protein_coding	Ccni	utr3	ENSMUSG00000063015	ProperStrand	43	1	-15.3999
chr7	13354610	13354626	protein_coding	Zscan18	exon	ENSMUSG00000070822	NonProperStrand	8	chr11	97642952	97643091	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-6.3446
chr2	70911218	70913567	protein_coding	Dcaf17	exon	ENSMUSG00000041966	ProperStrand	13	chr16	23110985	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-11.9579
chr3	130252121	130252137	protein_coding	Col25a1	utr3	ENSMUSG00000058897	ProperStrand	27	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.7840
chr8	85689747	85689763	protein_coding	Tbc1d9	utr5	ENSMUSG00000031709	ProperStrand	66	chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	1	-10.4270
chr7	52378276	52378307	protein_coding	Rps11	exon	ENSMUSG00000003429	ProperStrand	49	chr4	122970452	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-7.8193
chr15	29157258	29157274	LINE	Lx8	L1	chr15Lx829156540	ProperStrand	19	chr3	79223176	79223193	protein_coding	Gm17359	intron	ENSMUSG00000091685	NonProperStrand	50	1	-16.0047
chr17	24856676	24856768	antisense	Snhg9	.	ENSMUSG00000090101	ProperStrand	218	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-2.6872
chr2	59012358	59012374	protein_coding	Pkp4	intron	ENSMUSG00000026991	NonProperStrand	11	chr16	23110959	23110980	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.6241
chr7	109214309	109219810	protein_coding	Trpc2	utr5	ENSMUSG00000070425	ProperStrand	15	chr7	116664823	116664913	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-5.1476
chr2	32818804	32818943	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	7	-1.5553
chr9	110282242	110282258	protein_coding	Scap	exon	ENSMUSG00000032485	ProperStrand	37	chr4	116828379	116828452	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-9.3542
chr15	85617568	85617585	protein_coding	Ppara	exon	ENSMUSG00000022383	NonProperStrand	4	chr9	57104558	57104601	protein_coding	1700017B05Rik	exon	ENSMUSG00000032300	ProperStrand	22	1	-20.6761
chr5	115940316	115940407	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	chr2	26494708	26494840	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	16	-16.4113
chr3	94937206	94937491	polymorphic_pseudogene	Scnm1	.	ENSMUSG00000092607	NonProperStrand	2	chr7	4698268	4698286	protein_coding	Suv420h2	exon	ENSMUSG00000059851	ProperStrand	60	1	-inf
chr11	103201714	103221572	protein_coding	Arhgap27	exon	ENSMUSG00000034255	ProperStrand	21	chr12	106269284	106269384	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	2	-10.0951
chr4	55013078	55013097	protein_coding	Zfp462	intron	ENSMUSG00000060206	NonProperStrand	5	chr8	32260335	32260424	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-9.7163
chr6	83111671	83111687	protein_coding	1700003E16Rik	exon	ENSMUSG00000030030	ProperStrand	352	chr17	39985195	39985251	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-2.6184
chr7	127786656	127788733	protein_coding	Uqcrc2	exon	ENSMUSG00000030884	ProperStrand	26	chr9	15119968	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-8.9335
chr8	14671912	14671928	protein_coding	Dlgap2	intron	ENSMUSG00000047495	ProperStrand	20	chr9	15119631	15119712	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.6697
chr11	32287933	32287949	protein_coding	Sh3pxd2b	exon	ENSMUSG00000040711	NonProperStrand	13	chr11	6428108	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-6.1494
chr10	79415421	79415511	protein_coding	Arid3a	utr3	ENSMUSG00000019564	ProperStrand	16	chr15	79908938	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-8.1175
chr2	90235312	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chrX	107570274	107570290	pseudogene	Gm7134	.	ENSMUSG00000082853	NonProperStrand	9	1	-8.2671
chr5	150025157	150025173	protein_coding	Uspl1	exon	ENSMUSG00000041264	NonProperStrand	33	chr15	88932792	88932826	protein_coding	Tubgcp6	exon	ENSMUSG00000051786	ProperStrand	15	1	-17.3239
chr10	59589007	59589586	protein_coding	Spock2	exon	ENSMUSG00000058297	NonProperStrand	2	chr7	29136526	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-9.5181
chr11	50125195	50139003	protein_coding	Canx	utr5	ENSMUSG00000020368	ProperStrand	296	chr10	127934418	127934452	protein_coding	Myl6b	utr5	ENSMUSG00000039824	ProperStrand	3	3	-inf
chr1	93182012	93182028	protein_coding	Ube2f	utr3	ENSMUSG00000034343	NonProperStrand	22	chr16	23109026	23109048	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-9.3022
chr4	43505717	43505817	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr1	167822072	167822093	protein_coding	Pou2f1	intron	ENSMUSG00000026565	ProperStrand	34	1	-4.1223
chr4	133686862	133686952	protein_coding	Ccdc21	utr3	ENSMUSG00000037443	ProperStrand	112	chr4	56910548	56910628	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-4.8901
chr5	108741910	108742006	protein_coding	Pigg	utr5	ENSMUSG00000029263	ProperStrand	11	chr14	52829460	52829519	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-11.6607
chr8	86679286	86679317	protein_coding	4930432K21Rik	intron	ENSMUSG00000008129	NonProperStrand	2	chr19	37495804	37495853	protein_coding	Kif11	utr3	ENSMUSG00000012443	ProperStrand	29	1	-inf
chr4	119941547	119941564	protein_coding	Foxo6	exon	ENSMUSG00000052135	ProperStrand	31	chr2	26494708	26494836	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.3375
chr2	146125209	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	chr8	59991434	59991450	protein_coding	Hmgb2	exon	ENSMUSG00000054717	NonProperStrand	96	1	-10.1212
chr4	55543298	55543322	protein_coding	Klf4	exon	ENSMUSG00000003032	ProperStrand	64	chr10	23505151	23505248	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.1465
chrX	72214248	72214264	protein_coding-noncoding	Gab3	utr3	ENSMUSG00000032750	ProperStrand	420	chr4	141587614	141587630	protein_coding	Tmem51	exon	ENSMUSG00000040616	ProperStrand	30	1	-10.8157
chr15	99329179	99329195	protein_coding	Faim2	utr3	ENSMUSG00000023011	ProperStrand	45	chr1	63225588	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	2	-11.6380
chr7	87679949	87679965	protein_coding	Blm	utr5	ENSMUSG00000030528	NonProperStrand	19	chr16	23110455	23110514	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-7.6701
chr5	58626829	58626919	LTR	IAPEz-int	ERVK	chr5IAPEz-int58625598	ProperStrand	1	chr1	117783730	117783810	protein_coding	Cntnap5a	intron	ENSMUSG00000070695	NonProperStrand	9	1	-inf
chr13	96281944	96282072	protein_coding	F2rl1	utr3	ENSMUSG00000021678	ProperStrand	28	chr16	23110975	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.1386
chr5	67344915	67344984	protein_coding	Limch1	exon	ENSMUSG00000037736	ProperStrand	20	chr15	98350146	98350166	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-6.9313
chr10	87574512	87577276	protein_coding	4930547N16Rik	exon	ENSMUSG00000035365	ProperStrand	4	chr1	155287331	155287355	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	1	-14.6473
chr9	104095068	104098412	protein_coding	Dnajc13	exon	ENSMUSG00000032560	ProperStrand	60	chr8	113345439	113347303	protein_coding	Sf3b3	exon	ENSMUSG00000033732	ProperStrand	181	1	-11.0984
chr2	5851931	5851947	protein_coding	Dhtkd1	exon	ENSMUSG00000025815	ProperStrand	46	chr1	120293556	120293575	protein_coding	Clasp1	intron	ENSMUSG00000064302	NonProperStrand	8	1	-17.8375
chr2	32651558	32651658	protein_coding	Stxbp1	exon	ENSMUSG00000026797	ProperStrand	33	chr1	162965984	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	11	-20.7912
chr7	13881613	13881713	protein_coding	Lig1	exon	ENSMUSG00000056394	ProperStrand	89	chr3	96267933	96267954	tRNA	tRNA749-HisGTG	.	259672	ProperStrand	8	1	-16.6017
chr7	139591703	139591719	protein_coding	Fgfr2	intron	ENSMUSG00000030849	NonProperStrand	95	chr8	107783510	107783527	protein_coding	Tradd	exon	ENSMUSG00000031887	ProperStrand	23	1	-14.3284
chr11	69559495	69559595	protein_coding	Polr2a	exon	ENSMUSG00000005198	ProperStrand	200	chr17	35379683	35379700	protein_coding	Ddx39b	utr5	ENSMUSG00000019432	ProperStrand	119	1	-9.5245
chr11	68629519	68629619	protein_coding	Myh10	utr3	ENSMUSG00000020900	ProperStrand	91	chr15	79913288	79913320	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.8397
chr2	129998643	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr15	64530876	64530892	protein_coding	Adcy8	utr3	ENSMUSG00000022376	ProperStrand	19	1	-10.4351
chr7	29938471	29938488	protein_coding	Fam98c	exon	ENSMUSG00000030590	ProperStrand	9	chr10	23505150	23505255	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.5477
chr6	71339054	71339082	protein_coding	Rmnd5a	utr3	ENSMUSG00000002222	ProperStrand	38	chr3	123210854	123210954	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.8448
chr17	56448869	56448969	protein_coding	Uhrf1	exon	ENSMUSG00000001228	ProperStrand	229	chr4	116827118	116827184	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-4.4287
chr10	79436233	79436264	protein_coding	Grin3b	intron	ENSMUSG00000035745	NonProperStrand	3	chr8	73419657	73419776	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-9.3031
chr10	59361087	59361187	protein_coding	Dnajb12	utr3	ENSMUSG00000020109	ProperStrand	27	chr1	162965570	162965596	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.7840
chr19	26785161	26790606	protein_coding	Smarca2	exon	ENSMUSG00000024921	ProperStrand	38	chr9	120038467	120038562	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.8790
chr3	23326181	23326197	LTR	RLTR9D	ERVK	chr3RLTR9D23325954	ProperStrand	21	chr10	87820027	87820043	protein_coding	Dram1	intron	ENSMUSG00000020057	ProperStrand	24	1	-17.2602
chr7	108440949	108440967	protein_coding	Atg16l2	intron	ENSMUSG00000047767	ProperStrand	121	chr4	122968599	122968689	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-4.9117
chr19	8948124	8948285	protein_coding	Ubxn1	exon	ENSMUSG00000071655	ProperStrand	68	chr5	108334195	108334285	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	4	-14.4853
chr8	44381669	44391258	protein_coding	Zfp42	exon	ENSMUSG00000051176	ProperStrand	127	chr16	23111373	23111479	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-2.6044
chr12	25143580	25143670	SINE	B1_Mus1	Alu	chr12B1_Mus125143558	NonProperStrand	1	chr1	4845367	4845457	protein_coding	Lypla1	intron	ENSMUSG00000025903	ProperStrand	12	1	-inf
chr14	52823594	52823674	protein_coding	Chd8	exon	ENSMUSG00000053754	ProperStrand	167	chr2	130101996	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-3.4169
chr10	127558916	127558949	protein_coding	Baz2a	exon	ENSMUSG00000040054	ProperStrand	274	chr18	35716830	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-1.2990
chr1	99558430	99558446	protein_coding	D1Ertd622e	exon	ENSMUSG00000044768	ProperStrand	5	chr18	73693169	73693189	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-10.6437
chr1	129961223	129961257	protein_coding	Zranb3	intron	ENSMUSG00000036086	ProperStrand	19	chr2	153050783	153050799	protein_coding	Tspyl3	exon	ENSMUSG00000074671	ProperStrand	228	1	-12.9704
chr11	69387891	69389652	protein_coding	Wrap53	intron	ENSMUSG00000041346	ProperStrand	14	chr4	131865867	131865971	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	7	-inf
chr12	85292848	85292864	protein_coding	2410016O06Rik	exon	ENSMUSG00000046791	ProperStrand	27	chr12	112779147	112779205	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-6.3441
chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	1	-7.6192
chr1	173433177	173433254	protein_coding	B930036N10Rik	utr3	ENSMUSG00000091993	ProperStrand	150	chr9	15118303	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	4	-7.2772
chr11	48616641	48616709	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	chr2	26493383	26493490	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-1.3982
chr12	56819291	56820670	protein_coding	Ralgapa1	exon	ENSMUSG00000021027	ProperStrand	9	chr9	15118332	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-7.2077
chr2	154703487	154704237	protein_coding	Eif2s2	exon	ENSMUSG00000074656	ProperStrand	96	chr19	8799855	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-4.0499
chr15	79797750	79797768	protein_coding	Cbx7	intron	ENSMUSG00000053411	ProperStrand	62	chr16	17035628	17035653	protein_coding	Mapk1	utr3	ENSMUSG00000063358	ProperStrand	67	1	-13.0259
chr5	37700302	37700318	protein_coding	Evc	exon	ENSMUSG00000029122	ProperStrand	14	chr18	74938045	74938064	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	ProperStrand	1022	1	-10.6003
chr11	115279205	115279756	protein_coding	Atp5h	exon	ENSMUSG00000034566	ProperStrand	11	chr4	131908236	131908354	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-7.4568
chr2	29746035	29746057	protein_coding	Odf2	intron	ENSMUSG00000026790	ProperStrand	58	chr9	120038613	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.0999
chr17	89408214	89408230	protein_coding	Fshr	intron	ENSMUSG00000032937	NonProperStrand	29	chr15	34370656	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-4.9323
chr3	86336809	86336899	protein_coding	Lrba	intron	ENSMUSG00000028080	ProperStrand	39	chr4	131908363	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	6	-12.9828
chr9	78329448	78329468	protein_coding	Eef1a1	utr5	ENSMUSG00000037742	ProperStrand	1990	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-0.8454
chr17	35290485	35290530	protein_coding	Prrc2a	exon	ENSMUSG00000024393	ProperStrand	315	chr10	90581035	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-1.8450
chr11	87913128	87913145	processed_transcript	2210416O15Rik	.	ENSMUSG00000087498	ProperStrand	76	chr2	130101240	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-6.1243
chr4	117910583	117910600	protein_coding	Ptprf	exon	ENSMUSG00000033295	NonProperStrand	7	chr17	39985197	39985292	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-10.3222
chr15	8103502	8103582	protein_coding	Nup155	intron	ENSMUSG00000022142	ProperStrand	91	chr3	108357255	108357345	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-3.7538
chr15	99433433	99433451	protein_coding	Aqp6	exon	ENSMUSG00000043144	NonProperStrand	45	chr9	120039581	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-6.5066
chr3	104643765	104643805	protein_coding	Capza1	exon	ENSMUSG00000070372	ProperStrand	42	chr1	89673555	89673645	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-3.9236
chr11	72261305	72264495	protein_coding	Mybbp1a	exon	ENSMUSG00000040463	ProperStrand	279	chr11	97642952	97643052	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-1.6657
chr4	109050481	109050520	protein_coding	Eps15	intron	ENSMUSG00000028552	ProperStrand	15	chr2	130103459	130103501	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	2	-17.1584
chr7	35536401	35536423	protein_coding	Chst8	intron	ENSMUSG00000060402	NonProperStrand	3	chr16	23111775	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-13.4294
chr17	23956201	23956301	protein_coding	Srrm2	utr3	ENSMUSG00000039218	ProperStrand	521	chr2	144091713	144091767	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	ProperStrand	549	1	-4.6307
chr8	96703759	96703785	protein_coding	Mt1	exon	ENSMUSG00000031765	ProperStrand	92	chr9	15118245	15118322	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-4.7175
chr4	131908357	131908457	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	1	-2.9831
chr10	59936491	59936514	protein_coding	Cdh23	intron	ENSMUSG00000012819	ProperStrand	16	chr13	51745905	51746003	protein_coding	Cks2	utr3	ENSMUSG00000062248	ProperStrand	26	1	-17.5943
chr7	132364376	132364397	LINE	L1MEc	L1	chr7L1MEc132364369	NonProperStrand	1	chr16	57391758	57391792	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	1	-inf
chr18	64663203	64664104	protein_coding	Nars	exon	ENSMUSG00000024587	ProperStrand	97	chr16	23110527	23110584	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	7	-13.4770
chr1	120555688	120558624	protein_coding	Tfcp2l1	exon	ENSMUSG00000026380	ProperStrand	158	chr2	71085921	71085937	protein_coding	Dync1i2	exon	ENSMUSG00000027012	NonProperStrand	58	1	-11.4386
chr16	8707752	8707803	protein_coding	Usp7	exon	ENSMUSG00000022710	ProperStrand	118	chr2	142217965	142217986	protein_coding	Macrod2	utr3	ENSMUSG00000068205	ProperStrand	18	2	-19.8764
chr1	59176901	59176917	protein_coding	Als2cr4	utr5	ENSMUSG00000038079	ProperStrand	15	chr4	131908356	131908413	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-6.4894
chr4	137085155	137085354	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	chr9	30235085	30235102	protein_coding	Snx19	exon	ENSMUSG00000031993	ProperStrand	353	1	-4.6269
chr4	131908228	131908466	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr1	162967751	162967807	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	2	-7.1324
chr1	164664625	164664654	protein_coding	Prrc2c	intron	ENSMUSG00000040225	ProperStrand	413	chr4	131865381	131865471	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	14	-22.4067
chr7	3658338	3658428	protein_coding	Rps9	exon	ENSMUSG00000006333	ProperStrand	87	chr19	8798484	8798553	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-4.4955
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr7	148445932	148445948	protein_coding	Phrf1	exon	ENSMUSG00000038611	ProperStrand	86	1	-7.8735
chr15	88796430	88796828	protein_coding	Mlc1	exon	ENSMUSG00000035805	ProperStrand	10	chr7	116664872	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-14.1581
chr11	97639455	97639624	protein_coding	Rpl23	exon	ENSMUSG00000071415	ProperStrand	920	chr1	172975116	172975189	tRNA	tRNA699-GlyGCC	.	1635554	ProperStrand	660	1	-3.2315
chr5	121655027	121655117	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	chr1	162967734	162967807	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	1	-1.2125
chr11	70494381	70494480	protein_coding	Camta2	exon	ENSMUSG00000040712	ProperStrand	16	chr15	79913288	79913333	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-6.1593
chr11	53508560	53508855	protein_coding	Rad50	exon	ENSMUSG00000020380	ProperStrand	61	chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-6.4215
chr18	63137659	63140154	protein_coding	Napg	exon	ENSMUSG00000024581	ProperStrand	17	chr1	162966010	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-9.9012
chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	chr3	95422920	95422967	protein_coding	Golph3l	utr3	ENSMUSG00000046519	ProperStrand	4	1	-14.8620
chr11	120208427	120208470	protein_coding	Actg1	exon	ENSMUSG00000062825	ProperStrand	178	chr9	15118245	15118273	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-1.6251
chr9	14521224	14521241	protein_coding	Piwil4	intron	ENSMUSG00000036912	ProperStrand	24	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-9.5860
chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr1	162966206	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-2.3058
chr7	51794870	51795917	protein_coding	Pold1	exon	ENSMUSG00000038644	ProperStrand	50	chr13	49779667	49779745	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	2	-11.8393
chr7	150743728	150743793	protein_coding	Cars	utr3	ENSMUSG00000010755	ProperStrand	62	chr1	155287322	155287355	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	3	-18.7686
chr9	64039356	64039388	protein_coding	Map2k1	exon	ENSMUSG00000004936	ProperStrand	36	chr11	69466379	69466467	protein_coding	Fxr2	utr3	ENSMUSG00000018765	ProperStrand	40	7	-inf
chr11	100414998	100415014	protein_coding	Ttc25	exon	ENSMUSG00000006784	NonProperStrand	119	chr2	130101972	130102030	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-4.0442
chr5	107772591	107772608	protein_coding	Brdt	exon	ENSMUSG00000029279	NonProperStrand	7	chr9	15119968	15120042	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-11.6649
chr11	75217027	75218321	protein_coding	Smyd4	exon	ENSMUSG00000018809	ProperStrand	11	chr11	74743151	74743167	protein_coding	Smg6	exon	ENSMUSG00000038290	NonProperStrand	20	1	-18.9599
chr1	75168872	75168918	protein_coding	Abcb6	exon	ENSMUSG00000026198	ProperStrand	9	chr11	69483181	69483271	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-10.0340
chr7	75339880	75339918	protein_coding	Igf1r	exon	ENSMUSG00000005533	ProperStrand	121	chr11	97642952	97642992	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.3681
chr11	51876136	51876156	lincRNA	Gm16953	intron	ENSMUSG00000087101	ProperStrand	20	chr11	78313939	78313956	protein_coding	Vtn	exon	ENSMUSG00000017344	ProperStrand	188	1	-13.2519
chr3	34550123	34550213	protein_coding	Sox2	exon	ENSMUSG00000074637	ProperStrand	299	chr2	158182179	158182269	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-2.0899
chr15	85690658	85690721	protein_coding	Gtse1	intron	ENSMUSG00000022385	ProperStrand	74	chr3	123210911	123210979	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.7343
chr2	90235292	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	118415307	118415323	protein_coding	Zfp9	exon	ENSMUSG00000072623	ProperStrand	4	1	-10.0500
chr2	126908677	126908727	protein_coding	Blvra	exon	ENSMUSG00000001999	ProperStrand	2	chr11	62418013	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-12.9780
chr7	112902795	112902811	protein_coding	Dchs1	exon	ENSMUSG00000036862	NonProperStrand	1	chr6	115755624	115755678	protein_coding	Rpl32	exon	ENSMUSG00000057841	ProperStrand	137	1	-inf
chr19	6375658	6375736	protein_coding	Sf1	exon	ENSMUSG00000024949	ProperStrand	251	chr2	31924012	31924028	protein_coding	Fam78a	utr3	ENSMUSG00000050592	NonProperStrand	340	1	-6.9849
chr4	126116686	126116776	protein_coding	Eif2c1	utr3	ENSMUSG00000041530	ProperStrand	30	chr8	32260343	32260423	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-5.9845
chr19	44188381	44188473	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr8	73419656	73419746	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	8	-2.4731
chr13	97266647	97266664	protein_coding	Polk	exon	ENSMUSG00000021668	NonProperStrand	25	chr13	51743310	51743337	protein_coding	Cks2	intron	ENSMUSG00000062248	ProperStrand	26	1	-16.7055
chr5	77704306	77709761	protein_coding	Rest	exon	ENSMUSG00000029249	ProperStrand	136	chr13	90238641	90238717	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	1	-7.0170
chr16	20722149	20722249	protein_coding	Polr2h	utr3	ENSMUSG00000021018	ProperStrand	11	chr9	15119733	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.8656
chr18	46665423	46665450	protein_coding	Fem1c	exon	ENSMUSG00000033319	ProperStrand	11	chr2	130513577	130513752	protein_coding	Slc4a11	exon	ENSMUSG00000074796	ProperStrand	15	1	-19.7864
chr16	10285579	10285679	protein_coding	Emp2	exon	ENSMUSG00000022505	ProperStrand	2	chr1	162967515	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-10.7784
chr4	132066187	132066246	protein_coding	Sesn2	utr5	ENSMUSG00000028893	ProperStrand	75	chr4	110777378	110777396	protein_coding	Agbl4	intron	ENSMUSG00000061298	ProperStrand	14	1	-15.8481
chr19	10689422	10690000	protein_coding	Ddb1	exon	ENSMUSG00000024740	ProperStrand	304	chr11	6428065	6428169	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-1.5049
chr11	98862304	98862394	protein_coding	Top2a	exon	ENSMUSG00000020914	ProperStrand	324	chr1	63225076	63225422	protein_coding	Eef1b2	exon	ENSMUSG00000025967	ProperStrand	106	1	-8.7937
chr6	71444631	71444648	protein_coding	Rnf103	utr5	ENSMUSG00000052656	NonProperStrand	11	chr1	64737697	64737760	protein_coding	Ccnyl1	intron	ENSMUSG00000070871	ProperStrand	3	1	-22.5261
chr2	26494771	26494871	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	3	-5.4814
chr6	91694950	91698334	protein_coding	Slc6a6	exon	ENSMUSG00000030096	ProperStrand	206	chr19	8799834	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-2.6662
chr13	51654819	51654836	protein_coding	Shc3	intron	ENSMUSG00000021448	ProperStrand	50	chr3	108357255	108357357	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-4.8910
chr11	69159003	69159019	protein_coding	Chd3	exon	ENSMUSG00000018474	NonProperStrand	8	chr11	62416598	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-9.2486
chr2	172859154	172859193	protein_coding	Rbm38	exon	ENSMUSG00000027510	ProperStrand	33	chr7	140910047	140910064	protein_coding	Bccip	intron	ENSMUSG00000030983	NonProperStrand	1	1	-inf
chr15	45130790	45130809	LINE	L1_Mus2	L1	chr15L1_Mus245129537	NonProperStrand	17	chr17	14036135	14039537	protein_coding	Mllt4	exon	ENSMUSG00000068036	ProperStrand	156	1	-13.9588
chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr19	8963032	8963048	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-0.8329
chr6	118361610	118361989	protein_coding	Bms1	exon	ENSMUSG00000030138	ProperStrand	107	chr2	32818886	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-4.3556
chr2	32818150	32818563	protein_coding	Rpl12	exon	ENSMUSG00000038900	ProperStrand	167	chr11	62416630	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-3.2387
chr2	127642776	127642821	protein_coding	Bub1	intron	ENSMUSG00000027379	ProperStrand	26	chr16	23111734	23111762	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-5.7618
chr19	21931606	21931633	protein_coding	Tmem2	utr3	ENSMUSG00000024754	ProperStrand	133	chr11	62418028	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	4	-13.0174
chr10	98481387	98481454	protein_coding	Atp2b1	exon	ENSMUSG00000019943	ProperStrand	31	chr17	35087894	35087946	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-6.5017
chr5	135499717	135499737	protein_coding	Stx1a	intron	ENSMUSG00000007207	ProperStrand	4	chr5	54389948	54389966	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	1	-16.4215
chr15	103148452	103148514	protein_coding	Zfp385a	exon	ENSMUSG00000000552	ProperStrand	9	chr14	45949538	45949554	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	1	-13.8104
chr6	93735530	93735578	protein_coding	Magi1	exon	ENSMUSG00000045095	ProperStrand	106	chr11	51551280	51551334	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	3	-14.9419
chr1	53982566	53982583	protein_coding	Hecw2	exon	ENSMUSG00000042807	ProperStrand	39	chr1	89673628	89673728	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-4.0636
chr5	129528418	129528672	protein_coding	Ran	exon	ENSMUSG00000029430	ProperStrand	82	chr4	131866156	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-5.3301
chr19	8799581	8799644	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	chr8	129468749	129468876	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	13	-8.5347
chr7	34992750	34992767	protein_coding	Gpi1	exon	ENSMUSG00000036427	NonProperStrand	40	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-8.0137
chr8	87527310	87527363	SINE	B3	B2	chr8B387527237	ProperStrand	1	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-inf
chr3	145651434	145651450	protein_coding	Syde2	exon	ENSMUSG00000036863	NonProperStrand	20	chr2	158182215	158182281	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-7.1805
chr9	64025141	64025241	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	chr7	13516195	13516211	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	1	-4.1330
chr12	100012462	100012490	protein_coding	Zc3h14	exon	ENSMUSG00000021012	ProperStrand	27	chr11	108204937	108204953	protein_coding	Prkca	exon	ENSMUSG00000050965	ProperStrand	48	1	-15.3729
chr3	152450610	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	chr16	3856858	3856874	protein_coding	Zfp174	utr3	ENSMUSG00000054939	NonProperStrand	166	1	-6.7790
chr15	82980087	82980225	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr11	6428060	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	13	-4.3189
chr12	17552967	17553057	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr10	127521199	127521271	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	1	-1.1862
chrX	102621959	102621979	LTR	RLTR6_Mm	ERV1	chrXRLTR6_Mm102621458	NonProperStrand	4	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	1	-12.6877
chr2	91613185	91613203	protein_coding	Ambra1	exon	ENSMUSG00000040506	ProperStrand	65	chr14	77424372	77424388	protein_coding	9030625A04Rik	utr3	ENSMUSG00000044350	NonProperStrand	152	1	-11.2868
chr9	121551863	121551879	protein_coding	Vipr1	utr5	ENSMUSG00000032528	NonProperStrand	2	chr3	68889160	68889237	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-10.5388
chr7	112782969	112782985	protein_coding	Arfip2	utr3	ENSMUSG00000030881	ProperStrand	191	chr7	28959550	28959586	protein_coding	Fbl	exon	ENSMUSG00000046865	ProperStrand	52	1	-11.2784
chr9	15514257	15514273	protein_coding	Slc36a4	exon	ENSMUSG00000043885	ProperStrand	94	chr18	75161533	75161560	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-6.3138
chr3	85942437	85943041	protein_coding	Rps3a	exon	ENSMUSG00000028081	ProperStrand	177	chr12	106269283	106269383	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	4	-8.1606
chr10	41203254	41203289	protein_coding	Mical1	exon	ENSMUSG00000019823	ProperStrand	7	chr19	8963027	8963129	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	5	-inf
chr4	46508133	46508153	snoRNA	ENSMUSG00000064410_SNORA36	.	ENSMUSG00000064410	ProperStrand	133	chr19	8963051	8963151	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.0820
chr15	84851764	84851781	protein_coding	Upk3a	exon	ENSMUSG00000022435	NonProperStrand	4	chr16	23110913	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-12.7696
chr13	9833551	9833656	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr6	115757992	115758122	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	11	-3.4594
chr2	30446673	30446763	LTR	MLT1J2	MaLR	chr2MLT1J230446505	ProperStrand	1	chr2	30446263	30446343	SINE	B1_Mur3	Alu	chr2B1_Mur330446223	ProperStrand	1	1	-inf
chr1	93182012	93182028	protein_coding	Ube2f	utr3	ENSMUSG00000034343	NonProperStrand	22	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-12.4607
chr15	88988072	88988115	protein_coding	Plxnb2	exon	ENSMUSG00000036606	ProperStrand	119	chr7	116664841	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-4.2814
chr4	132806030	132806131	protein_coding	Map3k6	exon	ENSMUSG00000028862	NonProperStrand	28	chr17	35089239	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-6.9955
chr10	80273067	80273083	protein_coding	Jsrp1	exon	ENSMUSG00000020216	NonProperStrand	2	chrX	71517832	71517951	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-13.9887
chr7	28833903	28833919	protein_coding	Psmc4	exon	ENSMUSG00000030603	NonProperStrand	1	chr19	8799022	8799052	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-inf
chrX	160396313	160396329	protein_coding	Zrsr2	utr5	ENSMUSG00000031370	ProperStrand	57	chr9	72595423	72595481	protein_coding	Nedd4	utr3	ENSMUSG00000032216	ProperStrand	308	1	-10.1383
chr6	105620304	105620322	LTR	ORR1D2	MaLR	chr6ORR1D2105620071	ProperStrand	1	chr17	24857780	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-inf
chr12	114267820	114267836	protein_coding	Pacs2	intron	ENSMUSG00000021143	NonProperStrand	302	chr5	108336376	108336406	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-1.9722
chr10	127522163	127522263	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr18	35102297	35102340	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	5	-10.6747
chr14	61648824	61648841	protein_coding	Tnfrsf19	intron	ENSMUSG00000060548	ProperStrand	34	chr16	23111702	23111740	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.8630
chr2	144087331	144087451	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	chr15	98356817	98356847	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	1	-1.4988
chr8	108687309	108687399	protein_coding	Pla2g15	utr3	ENSMUSG00000031903	ProperStrand	40	chr4	131908728	131908808	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.8200
chr10	23505181	23505271	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	chr9	20693934	20693995	snoRNA	ENSMUSG00000077702_SNORD105	.	ENSMUSG00000077702	ProperStrand	41	1	-1.7922
chr1	44171752	44171819	protein_coding	Kdelc1	intron	ENSMUSG00000026047	ProperStrand	22	chr11	69483190	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	5	-17.7341
chr2	134421269	134421374	protein_coding	Tmx4	utr3	ENSMUSG00000034723	ProperStrand	7	chr16	23110883	23110911	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-20.1977
chr3	133150273	133150303	protein_coding	Tet2	exon	ENSMUSG00000040943	ProperStrand	192	chr7	117166761	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	5	-12.0971
chr17	39985202	39985291	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr1	72272877	72272957	snRNA	ENSMUSG00000075752_U2	.	ENSMUSG00000075752	ProperStrand	535	1	-1.9259
chr5	31443568	31443586	protein_coding	Mpv17	utr3	ENSMUSG00000090262	ProperStrand	13	chr16	23111452	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-6.6036
chr9	21207623	21207703	protein_coding	Ilf3	exon	ENSMUSG00000032178	ProperStrand	164	chr17	35299525	35299615	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	2	-5.0360
chr4	141030038	141030075	protein_coding	Spen	exon	ENSMUSG00000040761	ProperStrand	161	chr19	8800356	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	8	-16.6894
chr7	129311263	129312092	protein_coding	Plk1	exon	ENSMUSG00000030867	ProperStrand	146	chr6	71832629	71832687	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-3.9063
chr11	82757118	82757140	antisense	1700003F17Rik	.	ENSMUSG00000086327	NonProperStrand	12	chr16	23111383	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.0123
chr4	133742939	133742956	protein_coding	Ccdc21	utr5	ENSMUSG00000037443	ProperStrand	112	chr7	52382753	52382831	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-5.5242
chr3	146409614	146410898	protein_coding	Prkacb	exon	ENSMUSG00000005034	ProperStrand	15	chr16	37384897	37384913	protein_coding	Stxbp5l	utr5	ENSMUSG00000022829	ProperStrand	332	1	-12.7047
chr5	108871193	108871209	protein_coding	Mfsd7a	exon	ENSMUSG00000029490	ProperStrand	1	chr7	52381719	52381760	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-inf
chr1	120355753	120355843	snRNA	ENSMUSG00000080542_U4atac	.	ENSMUSG00000080542	ProperStrand	73	chr11	6428098	6428157	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.8420
chr8	123182965	123184744	protein_coding	Cox4nb	exon	ENSMUSG00000031819	ProperStrand	21	chr10	127521205	127521270	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	1	-10.9181
chr11	4925683	4926266	protein_coding	Ap1b1	exon	ENSMUSG00000009090	ProperStrand	43	chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	1	-9.8582
chr11	60001911	60001927	protein_coding	Rai1	exon	ENSMUSG00000062115	NonProperStrand	81	chr15	79908932	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-4.8900
chr4	133574127	133574143	protein_coding	Lin28a	exon	ENSMUSG00000050966	ProperStrand	55	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.9045
chrX	77306658	77306675	pseudogene	Gm4773	.	ENSMUSG00000080847	NonProperStrand	11	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-6.5834
chr7	36624700	36624716	LTR	ORR1D1	MaLR	chr7ORR1D136624516	NonProperStrand	6	chr9	78327091	78327177	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-11.0680
chr11	6428087	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr11	106874234	106874253	tRNA	tRNA945-ArgCCG	.	1259572	ProperStrand	133	1	-1.8398
chr3	32237212	32237247	protein_coding	Zmat3	utr3	ENSMUSG00000027663	ProperStrand	62	chr7	150717298	150717382	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	4	-16.6929
chr7	26029872	26029962	protein_coding	Erf	exon	ENSMUSG00000040857	ProperStrand	20	chr4	131865853	131865943	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.6810
chr3	96527897	96527914	protein_coding	Polr3c	exon	ENSMUSG00000028099	ProperStrand	16	chr9	120038554	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.5625
chr9	53395666	53397377	protein_coding	Acat1	exon	ENSMUSG00000032047	ProperStrand	13	chr3	123210854	123210894	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-4.8751
chr13	63945866	63945966	protein_coding	0610007P08Rik	exon	ENSMUSG00000021470	ProperStrand	26	chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-7.5077
chr17	56348396	56348432	protein_coding	Dpp9	intron	ENSMUSG00000001229	ProperStrand	17	chr2	26493364	26493483	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-6.1967
mmu-miR-6240	3	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr2	160775765	160775827	protein_coding	Chd6	exon	ENSMUSG00000057133	ProperStrand	104	1	-4.8334
chr10	79321548	79321700	protein_coding	Ptbp1	exon	ENSMUSG00000006498	ProperStrand	129	chr11	69483164	69483237	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.2610
chr16	32682543	32682569	protein_coding	Tnk2	intron	ENSMUSG00000022791	ProperStrand	86	chr9	120039578	120039678	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.6773
chr4	55431652	55431668	lincRNA	Gm12505	exon	ENSMUSG00000087070	ProperStrand	447	chr6	122272951	122273046	protein_coding	Phc1	intron	ENSMUSG00000040669	ProperStrand	158	2	-11.7954
chr5	34234244	34234262	protein_coding	Whsc1	utr5	ENSMUSG00000057406	ProperStrand	409	chr12	112779160	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-1.4293
chr1	133221678	133252439	protein_coding	Srgap2	utr5	ENSMUSG00000026425	ProperStrand	299	chr17	35299507	35299597	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	2	-3.4505
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr7	4656823	4656840	protein_coding	Brsk1	exon	ENSMUSG00000035390	ProperStrand	12	1	-11.0688
chr2	179322379	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr7	88186459	88186475	protein_coding	Zfp592	exon	ENSMUSG00000005621	NonProperStrand	32	1	-12.4817
chr11	5161674	5161697	Simple_repeat	(CCCCG)n	Simple_repeat	chr11(CCCCG)n5161623	ProperStrand	4	chr3	153574587	153574654	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	3	-19.5229
chr5	138173553	138173629	protein_coding	6430598A04Rik	intron	ENSMUSG00000045348	ProperStrand	7	chr16	23110913	23111003	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.4785
chr17	4082300	4082338	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr7	128102926	128102942	protein_coding	Cdr2	intron	ENSMUSG00000030878	ProperStrand	21	1	-12.0920
chr6	116577470	116577560	protein_coding	Zfp422	intron	ENSMUSG00000059878	ProperStrand	3	chr1	9932550	9932626	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-14.0920
chr9	21574430	21574530	protein_coding	Kank2	exon	ENSMUSG00000032194	ProperStrand	196	chr10	82456766	82456784	protein_coding	Chst11	intron	ENSMUSG00000034612	ProperStrand	170	3	-23.4354
chr2	109516160	109516176	protein_coding	Bdnf	utr5	ENSMUSG00000048482	NonProperStrand	47	chr11	97643036	97643056	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.8973
chr14	71295884	71301302	protein_coding	Gfra2	exon	ENSMUSG00000022103	ProperStrand	26	chr9	15119631	15119693	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.1620
chr7	120047363	120047453	protein_coding	Tead1	utr3	ENSMUSG00000055593	ProperStrand	15	chr5	130300458	130300538	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-5.1031
chr8	81151373	81151390	protein_coding	Slc10a7	intron	ENSMUSG00000031684	ProperStrand	55	chr8	73419657	73419712	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.2879
chr9	56775853	56775870	protein_coding	Snx33	utr5	ENSMUSG00000032733	NonProperStrand	116	chr15	79913294	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.4206
chr1	72757883	72758255	protein_coding	Rpl37a	utr5	ENSMUSG00000046330	ProperStrand	94	chrX	34622906	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-4.2239
chr11	98857262	98858080	protein_coding	Top2a	exon	ENSMUSG00000020914	ProperStrand	324	chr18	33157688	33157705	protein_coding	Camk4	intron	ENSMUSG00000038128	NonProperStrand	42	1	-10.6528
chr18	35716788	35716878	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	chr5	147646419	147646470	snoRNA	ENSMUSG00000077185_SNORD102	.	ENSMUSG00000077185	ProperStrand	142	1	-0.9209
chr1	75484537	75484553	protein_coding	Obsl1	exon	ENSMUSG00000026211	NonProperStrand	192	chr11	76859882	76859917	protein_coding	Ccdc55	exon	ENSMUSG00000037958	ProperStrand	4	1	-16.6545
chr7	87369260	87369340	protein_coding	Sema4b	intron	ENSMUSG00000030539	ProperStrand	54	chr2	135037570	135037660	protein_coding	Plcb1	intron	ENSMUSG00000051177	ProperStrand	13	1	-16.6594
chr4	53015201	53015217	SINE	B1F1	Alu	chr4B1F153015138	ProperStrand	102	chr2	166890503	166890557	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	2	-10.5109
chr9	115186082	115189552	protein_coding	Stt3b	exon	ENSMUSG00000032437	ProperStrand	66	chr5	101108852	101108869	protein_coding	Hpse	utr3	ENSMUSG00000035273	NonProperStrand	18	1	-15.5287
chr17	33156752	33156798	protein_coding	Zfp763	exon	ENSMUSG00000067430	NonProperStrand	1	chr16	23111395	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	NonProperStrand	38	1	-inf
chr11	6520320	6520442	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	chr3	108357277	108357383	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	3	-1.3767
chr7	51505239	51505309	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	chr14	52829460	52829559	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-3.2144
chr13	19684241	19684257	protein_coding	Epdr1	utr3	ENSMUSG00000002808	ProperStrand	46	chr11	78313939	78313956	protein_coding	Vtn	exon	ENSMUSG00000017344	ProperStrand	188	1	-11.5578
chr9	78326987	78327172	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr1	162966204	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-1.2219
chr16	11144203	11144303	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr8	73419647	73419730	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	NonProperStrand	53	1	-10.7097
chr11	5604542	5604566	protein_coding	Mrps24	exon	ENSMUSG00000020477	ProperStrand	18	chr15	79908989	79909019	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-7.8766
chr11	67930538	67930565	protein_coding	Stx8	intron	ENSMUSG00000020903	ProperStrand	21	chr16	23110913	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.5481
chr2	145076803	145209250	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	chr1	90123798	90124639	protein_coding	Heatr7b1	utr5	ENSMUSG00000079429	ProperStrand	147	1	-5.9504
chr17	34747537	34747555	protein_coding	Agpat1	exon	ENSMUSG00000034254	NonProperStrand	39	chr7	29136554	29136600	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.1194
chr1	90160618	90160687	protein_coding	Hjurp	utr3	ENSMUSG00000044783	NonProperStrand	3	chr12	112779171	112779254	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	NonProperStrand	10	1	-inf
chr4	126736264	126736821	protein_coding	Zmym1	utr5	ENSMUSG00000043872	ProperStrand	11	chr16	23111468	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.1830
chr6	82723925	82723999	protein_coding	Hk2	utr5	ENSMUSG00000000628	ProperStrand	88	chr16	38158144	38158226	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	1	-7.8848
chr5	65952377	65990103	protein_coding	Ube2k	intron	ENSMUSG00000029203	ProperStrand	289	chr4	131865855	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	7	-3.5331
chr4	55541168	55541226	protein_coding	Klf4	intron	ENSMUSG00000003032	ProperStrand	64	chr5	74489575	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-3.6580
chr6	83111671	83111687	protein_coding	1700003E16Rik	exon	ENSMUSG00000030030	ProperStrand	352	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-5.4273
chr17	29103772	29103872	protein_coding	Kctd20	exon	ENSMUSG00000005936	ProperStrand	21	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-5.6139
chr6	51415195	51416195	protein_coding	Hnrnpa2b1	exon	ENSMUSG00000004980	ProperStrand	166	chr19	8799844	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-3.0453
chr12	85350481	85350499	protein_coding	Acot1	utr5	ENSMUSG00000072949	ProperStrand	72	chr7	118219574	118219619	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-3.8277
chr7	30933357	30933447	SINE	ID_B1	B4	chr7ID_B130933309	NonProperStrand	1	chr7	30933475	30933555	SINE	RSINE1	B4	chr7RSINE130933492	NonProperStrand	1	1	-inf
chr7	5062341	5062362	protein_coding	Rfpl4	exon	ENSMUSG00000035191	NonProperStrand	27	chr2	26494708	26494759	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-7.6776
chr3	85942717	85942780	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	chr18	35716811	35716874	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	6	-2.7663
chr6	83067795	83067826	protein_coding	Mogs	exon	ENSMUSG00000030036	ProperStrand	14	chr7	95266597	95266613	protein_coding	Grm5	intron	ENSMUSG00000049583	NonProperStrand	145	1	-14.5101
chr10	42660151	42660170	protein_coding-noncoding	Scml4	utr5	ENSMUSG00000044770	ProperStrand	4	chr19	8963091	8963164	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	4	-inf
chr4	128679706	128687953	protein_coding	Ak2	exon	ENSMUSG00000028792	ProperStrand	43	chrX	34622906	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	3	-9.3323
chr2	90235305	90235337	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	60040929	60041029	protein_coding	Tom1l2	utr3	ENSMUSG00000000538	ProperStrand	3	1	-10.7414
chr15	36530723	36531110	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr7	148279647	148279737	protein_coding	Sigirr	exon	ENSMUSG00000025494	ProperStrand	30	1	-9.2769
chr1	88253646	88253736	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chr11	116938620	116938700	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-0.9645
chr5	37853650	37853667	protein_coding	Stk32b	intron	ENSMUSG00000029123	ProperStrand	7	chr8	13590276	13592014	protein_coding	Rasa3	exon	ENSMUSG00000031453	ProperStrand	22	1	-19.3146
chr11	101466256	101466351	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	chr5	121655127	121655154	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	3	-1.7433
chr12	77704590	77704606	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	chr1	71687839	71687877	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	2	-6.8094
chr11	42440243	42440259	protein_coding	Gabrb2	exon	ENSMUSG00000007653	ProperStrand	248	chr3	31020268	31020300	protein_coding	Skil	utr3	ENSMUSG00000027660	ProperStrand	23	1	-12.4091
chr8	113579097	113579168	protein_coding	Aars	utr3	ENSMUSG00000031960	ProperStrand	355	chr11	60370927	60370943	protein_coding	Alkbh5	utr3	ENSMUSG00000042650	ProperStrand	203	1	-7.3194
chr8	4267337	4267649	protein_coding	Timm44	exon	ENSMUSG00000002949	ProperStrand	63	chr1	162966812	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-6.1626
chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	chr16	19883898	19884020	protein_coding	A930003A15Rik	exon	ENSMUSG00000075330	ProperStrand	93	1	-11.6855
chrY	581857	581874	protein_coding	Uty	exon	ENSMUSG00000068457	ProperStrand	26	chr2	166890503	166890570	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-9.2399
chr5	136385751	136385841	protein_coding	Ywhag	utr3	ENSMUSG00000051391	ProperStrand	142	chr2	26494711	26494791	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.6660
chr16	44225761	44225778	protein_coding	Gm608	utr3	ENSMUSG00000068284	NonProperStrand	29	chr4	131908826	131908871	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.3468
chr9	20946705	20946721	protein_coding	Cdc37	exon	ENSMUSG00000019471	ProperStrand	97	chr3	122161828	122161848	protein_coding	Bcar3	intron	ENSMUSG00000028121	ProperStrand	21	1	-14.4758
chr7	19590197	19590213	protein_coding	Irf2bp1	exon	ENSMUSG00000044030	NonProperStrand	81	chr5	121655019	121655154	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.1969
chr9	108401014	108401031	protein_coding	Usp19	exon	ENSMUSG00000006676	ProperStrand	57	chr1	182499228	182499252	protein_coding	Parp1	exon	ENSMUSG00000026496	ProperStrand	227	1	-10.7482
chr12	86576304	86576394	protein_coding	Mlh3	utr3	ENSMUSG00000021245	ProperStrand	28	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	7	-20.8090
chr13	53769086	53769176	LTR	ORR1A2	MaLR	chr13ORR1A253768933	NonProperStrand	1	chr2	5715417	5715497	protein_coding	Cdc123	utr3	ENSMUSG00000039128	NonProperStrand	5	1	-inf
chr15	101926781	101926875	protein_coding	Eif4b	utr3	ENSMUSG00000058655	ProperStrand	484	chr5	130295486	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-1.5415
chr8	54507542	54507622	SINE	B4A	B4	chr8B4A54507545	ProperStrand	1	chr8	54507393	54507483	Simple_repeat	(GA)n	Simple_repeat	chr8(GA)n54507323	NonProperStrand	1	1	-inf
chr18	37911790	37911806	protein_coding	Pcdhga9	intron	ENSMUSG00000023036	ProperStrand	245	chr8	73419725	73419742	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-0.9360
chr3	27038050	27038469	protein_coding	Ect2	exon	ENSMUSG00000027699	NonProperStrand	4	chr16	57391627	57391750	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	1	-15.9672
chr9	57101531	57101565	protein_coding	1700017B05Rik	utr3	ENSMUSG00000032300	ProperStrand	22	chr14	31827478	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	4	-20.5765
chr11	116535466	116535533	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr1	162966189	162966254	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-0.9443
chr3	108447740	108447774	protein_coding	Wdr47	utr3	ENSMUSG00000040389	ProperStrand	4	chr9	120039566	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-8.8220
chr18	52648447	52648502	protein_coding	Srfbp1	exon	ENSMUSG00000024528	ProperStrand	9	chr2	158205317	158205407	snoRNA	ENSMUSG00000064585_SNORA71	.	ENSMUSG00000064585	ProperStrand	418	2	-22.2544
chr4	115984915	115985465	protein_coding	Mast2	exon	ENSMUSG00000003810	ProperStrand	37	chr19	8800356	8800436	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-4.4406
chr19	8907901	8908001	protein_coding	Hnrnpul2	utr3	ENSMUSG00000071659	ProperStrand	93	chr4	116826697	116826766	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-5.9168
chr16	24984504	24984520	protein_coding	Lpp	utr3	ENSMUSG00000033306	NonProperStrand	189	chr7	117189961	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-1.4289
chr14	20451772	20451789	LTR	IAPLTR3-int	ERVK	chr14IAPLTR3-int20447903	ProperStrand	44	chr16	56035873	56035919	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	1	-9.5689
chr3	89009743	89009759	protein_coding	Gba	exon	ENSMUSG00000028048	NonProperStrand	88	chr6	71832629	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-4.8670
chr19	11857619	11859888	protein_coding	Stx3	exon	ENSMUSG00000041488	ProperStrand	37	chr13	51743581	51743661	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-7.8256
chr2	166670971	166671061	protein_coding	Arfgef2	exon	ENSMUSG00000074582	ProperStrand	32	chr3	123210853	123210933	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-8.0531
chr9	15120922	15121088	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	chr10	110918548	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-1.4373
chr17	71345477	71345547	protein_coding	Myl12a	exon	ENSMUSG00000024048	ProperStrand	29	chr3	98125225	98125242	protein_coding	Phgdh	exon	ENSMUSG00000053398	NonProperStrand	6	1	-19.0827
chr10	80107050	80107403	protein_coding	Btbd2	exon	ENSMUSG00000003344	ProperStrand	68	chr16	23110473	23110549	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-4.0176
chr16	57391760	57391798	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr3	96303429	96303460	tRNA	tRNA748-LysCTT	.	1575986	ProperStrand	15	1	-10.6034
chr14	65372837	65372876	snoRNA	ENSMUSG00000064442_SNORA36	.	ENSMUSG00000064442	ProperStrand	296	chr18	33954887	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-1.9025
chr1	107743299	107743316	protein_coding	Tnfrsf11a	utr3	ENSMUSG00000026321	NonProperStrand	100	chr2	172829092	172830718	protein_coding	Rae1	exon	ENSMUSG00000027509	ProperStrand	38	1	-13.2101
chr5	102262907	102262997	protein_coding	Wdfy3	utr3	ENSMUSG00000043940	ProperStrand	45	chr16	23111754	23111834	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.3757
chr9	72579206	72597217	protein_coding	Nedd4	utr3	ENSMUSG00000032216	ProperStrand	308	chr11	97642952	97643014	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	4	-2.2518
chr3	96132424	96132514	snRNA	ENSMUSG00000075978_U1	.	ENSMUSG00000075978	ProperStrand	132	chr18	35714145	35714225	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-2.0717
chr2	131891108	131949466	protein_coding	Slc23a2	exon	ENSMUSG00000027340	ProperStrand	44	chr16	23111375	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	5	-9.0582
chr4	118805201	118805262	protein_coding	Slc2a1	exon	ENSMUSG00000028645	ProperStrand	361	chr7	109830472	109830488	protein_coding	Trim68	intron	ENSMUSG00000073968	ProperStrand	23	1	-11.6584
chr11	100452751	100452778	protein_coding	Dnajc7	exon	ENSMUSG00000014195	ProperStrand	49	chr11	113423607	113423624	protein_coding	Slc39a11	intron	ENSMUSG00000041654	NonProperStrand	39	1	-14.5908
chr2	91770112	91770165	protein_coding	Mdk	utr3	ENSMUSG00000027239	ProperStrand	56	chr8	73419657	73419757	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-5.5855
chr2	90235301	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	6416277	6416293	protein_coding	Myo1g	exon	ENSMUSG00000020437	ProperStrand	18	1	-6.8363
chr15	31525431	31525531	protein_coding	Cct5	exon	ENSMUSG00000022234	ProperStrand	116	chr4	131908689	131908781	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	8	-8.2212
chr7	66053268	66058847	protein_coding	Atp10a	exon	ENSMUSG00000025324	ProperStrand	37	chr18	35716834	35716872	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.0044
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr2	144087323	144087413	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-1.5293
chr7	51609337	51609437	protein_coding	Shank1	exon	ENSMUSG00000038738	ProperStrand	6	chr17	35087894	35087944	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-9.9053
chr19	10702298	10702345	protein_coding	Ddb1	utr3	ENSMUSG00000024740	ProperStrand	304	chr15	5068429	5068478	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-2.9951
chr9	120038462	120038674	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	chr4	131908234	131908757	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	193	-2.1885
chr8	13159371	13165875	protein_coding	Lamp1	utr5	ENSMUSG00000031447	ProperStrand	92	chr7	116663634	116663714	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.8106
chr2	129998658	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr10	80949475	80949492	protein_coding	Ncln	utr3	ENSMUSG00000020238	NonProperStrand	18	2	-16.6503
chrX	151769478	151769494	protein_coding	Prdx4	exon	ENSMUSG00000025289	ProperStrand	29	chr7	16524110	16524130	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	1	-11.1872
chr10	125201640	125201659	LTR	LTR41B	ERVL	chr10LTR41B125201600	ProperStrand	1	chr19	8963027	8963083	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-inf
chr5	138192475	138192575	protein_coding	Tsc22d4	exon	ENSMUSG00000029723	ProperStrand	24	chr7	118219574	118219627	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-5.9542
chr16	23110991	23111010	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr3	88115622	88115722	protein_coding	Cct3	exon	ENSMUSG00000001416	ProperStrand	82	5	-19.4897
chr2	91456556	91456589	protein_coding	Ckap5	exon	ENSMUSG00000040549	ProperStrand	53	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.6010
chr14	55084438	55084538	protein_coding	Lrp10	exon	ENSMUSG00000022175	ProperStrand	19	chr7	118219575	118219598	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-6.4226
chr17	34249029	34249110	protein_coding	Brd2	utr3	ENSMUSG00000024335	ProperStrand	69	chr16	23111777	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-4.8224
chr18	56867656	56867735	protein_coding	Lmnb1	utr5	ENSMUSG00000024590	ProperStrand	176	chr4	131865428	131865857	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-2.0954
chr11	43543781	43543881	protein_coding	Ttc1	utr3	ENSMUSG00000041278	ProperStrand	13	chr18	35714216	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-6.4211
chr15	102239933	102240022	protein_coding	Sp1	exon	ENSMUSG00000001280	ProperStrand	124	chr10	23505152	23505184	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-1.6997
chr11	31269280	31269380	protein_coding	Stc2	intron	ENSMUSG00000020303	ProperStrand	18	chr14	96988123	96988179	snoRNA	ENSMUSG00000064581_SNORA30	.	ENSMUSG00000064581	ProperStrand	146	1	-13.9732
chr19	9091000	9091060	protein_coding	Ahnak	exon	ENSMUSG00000069833	ProperStrand	103	chr16	23111373	23111463	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-2.2231
chr4	32595355	32595401	protein_coding	Bach2	intron	ENSMUSG00000040270	ProperStrand	14	chr6	125056705	125056728	protein_coding	Chd4	exon	ENSMUSG00000063870	ProperStrand	303	2	-inf
chr4	8769991	8770009	protein_coding	Chd7	intron	ENSMUSG00000041235	NonProperStrand	45	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-9.5049
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr10	23506324	23506348	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-2.7063
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr15	98350146	98350224	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-1.0500
chr6	41339015	41339105	Other	RMER1A	Other	chr6RMER1A41338907	ProperStrand	1	chr6	41339180	41339270	Other	RMER1A	Other	chr6RMER1A41339094	ProperStrand	1	1	-inf
chr19	29678580	29678596	protein_coding	C030046E11Rik	exon	ENSMUSG00000038658	ProperStrand	104	chr11	116533861	116533890	snoRNA	ENSMUSG00000065640_Snord1c	.	ENSMUSG00000065640	ProperStrand	373	1	-8.5514
chr12	17552949	17553087	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr2	144091738	144091878	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	ProperStrand	549	2	-2.3845
chr7	52975739	52975808	protein_coding	Rpl18	exon	ENSMUSG00000059070	ProperStrand	116	chr17	35299551	35299641	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-3.5343
chr13	23647275	23647345	protein_coding	Hist1h1d	exon	ENSMUSG00000052565	ProperStrand	78	chr10	110918579	110918669	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	4	-10.2919
chr17	42932838	42932895	protein_coding	Cd2ap	utr3	ENSMUSG00000061665	ProperStrand	44	chr3	68889048	68889082	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	2	-6.4746
chr17	9745119	9745199	LINE	L1VL1	L1	chr17L1VL19742580	ProperStrand	1	chr5	68889118	68889208	LINE	L1_Mus1	L1	chr5L1_Mus168888951	ProperStrand	1	1	-inf
chr4	116826701	116826739	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	chr9	64024484	64024567	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	1	-2.1625
chr6	83149928	83149977	protein_coding	Dctn1	utr3	ENSMUSG00000031865	ProperStrand	17	chr13	30338191	30338207	protein_coding	Mboat1	utr3	ENSMUSG00000038732	NonProperStrand	148	3	-25.3488
chr6	7625433	7625475	protein_coding	Asns	exon	ENSMUSG00000029752	ProperStrand	59	chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	1	-9.4311
chr5	115597892	115597908	protein_coding	Mlec	utr3	ENSMUSG00000048578	ProperStrand	47	chr7	116663659	116663749	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	NonProperStrand	51	1	-14.1433
chr4	140314051	140314067	protein_coding	Padi4	exon	ENSMUSG00000025330	NonProperStrand	3	chr17	35299559	35299630	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-11.0713
chr10	122562660	122562886	protein_coding	Usp15	exon	ENSMUSG00000020124	ProperStrand	24	chr12	112779223	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-6.5799
chr7	82925133	82925223	Simple_repeat	(TTGGGG)n	Simple_repeat	chr7(TTGGGG)n82925023	NonProperStrand	2	chr9	120037934	120038014	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-12.0930
chr5	31492973	31493024	protein_coding	Eif2b4	exon	ENSMUSG00000029145	ProperStrand	4	chr4	131865859	131865901	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.0048
chr19	8800353	8800472	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	NonProperStrand	18	chr3	153574606	153574654	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	NonProperStrand	3	2	-inf
chr9	56773800	56773900	protein_coding	Snx33	exon	ENSMUSG00000032733	ProperStrand	4	chr19	8799867	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-10.5562
chr18	7917622	7918469	protein_coding	Wac	exon	ENSMUSG00000024283	ProperStrand	38	chr4	62318892	62318908	protein_coding	Rgs3	utr3	ENSMUSG00000059810	ProperStrand	40	2	-inf
chr1	187028206	187028223	protein_coding	Rab3gap2	exon	ENSMUSG00000039318	ProperStrand	41	chr11	85345406	85345433	protein_coding	Bcas3	exon	ENSMUSG00000059439	ProperStrand	20	1	-16.3385
chr5	136362050	136362075	SINE	B3	B2	chr5B3136362038	ProperStrand	1	chr19	10696175	10696326	protein_coding	Ddb1	exon	ENSMUSG00000024740	ProperStrand	304	1	-inf
chr14	76926611	76926627	LINE	L1MB3	L1	chr14L1MB376926376	ProperStrand	61	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.7424
chr15	64097162	64097252	protein_coding	Asap1	intron	ENSMUSG00000022377	NonProperStrand	47	chr15	64097333	64097413	protein_coding	Asap1	intron	ENSMUSG00000022377	ProperStrand	29	1	-15.3058
chr6	128385747	128385858	protein_coding	Fkbp4	exon	ENSMUSG00000030357	ProperStrand	114	chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-5.1968
chr17	56989248	56989265	protein_coding	Acsbg2	exon	ENSMUSG00000024207	NonProperStrand	6	chr4	41160817	41160866	protein_coding	Ubap2	utr5	ENSMUSG00000028433	ProperStrand	292	1	-14.8822
chr2	27969206	27969222	lincRNA	F730016J06Rik	exon	ENSMUSG00000086425	ProperStrand	1	chr17	24857776	24857849	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-inf
chr6	142439080	142439096	protein_coding	Ldhb	exon	ENSMUSG00000030246	NonProperStrand	63	chr13	101541067	101541088	protein_coding	Cenph	intron	ENSMUSG00000045273	NonProperStrand	45	1	-13.7980
chr13	36960348	36960365	protein_coding	F13a1	utr3	ENSMUSG00000039109	NonProperStrand	15	chr1	162965539	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.9503
chr15	5068409	5068479	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	chr4	131866608	131866674	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	1	-2.1751
chr8	64017614	64028377	protein_coding	Palld	exon	ENSMUSG00000058056	NonProperStrand	125	chr5	108334240	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	2	-5.8533
chr19	29678580	29678596	protein_coding	C030046E11Rik	exon	ENSMUSG00000038658	ProperStrand	104	chr2	26493425	26493500	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-2.7481
chr19	6261807	6261824	protein_coding	Atg2a	exon	ENSMUSG00000024773	ProperStrand	97	chr11	48615535	48615554	snoRNA	ENSMUSG00000064725_Snord96a	.	ENSMUSG00000064725	ProperStrand	89	1	-11.5559
chrX	34622958	34623023	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	chr9	15118563	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	2	-0.8714
chr4	116826699	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	chr3	95980317	95980407	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-1.0439
chr18	63908609	63908625	protein_coding	Wdr7	intron	ENSMUSG00000040560	NonProperStrand	180	chr14	76247752	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-3.9360
chr14	21535287	21535515	protein_coding	2310021P13Rik	exon	ENSMUSG00000021819	ProperStrand	11	chr1	87961309	87961337	protein_coding	Psmd1	utr5	ENSMUSG00000026229	ProperStrand	664	1	-11.9647
chr12	36219400	36219416	protein_coding	Ahr	utr5	ENSMUSG00000019256	NonProperStrand	64	chr17	24856623	24856684	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	2	-10.2103
chr16	17483936	17483993	protein_coding	Crkl	utr3	ENSMUSG00000006134	ProperStrand	43	chr18	75161534	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	4	-21.4107
chr8	129468746	129468846	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	chr6	97112813	97112878	snoRNA	ENSMUSG00000065728_SNORA36	.	ENSMUSG00000065728	ProperStrand	158	1	-2.6426
chr5	54389949	54389967	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	chr12	110923182	110923231	snoRNA	ENSMUSG00000084487_SNORD113	.	ENSMUSG00000084487	ProperStrand	183	1	-8.5491
chr18	46894972	46895042	protein_coding	Atg12	intron	ENSMUSG00000032905	ProperStrand	4	chr18	33954817	33954907	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-14.8291
chr9	50816824	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	chr3	46250662	46250678	protein_coding	Pabpc4l	exon	ENSMUSG00000090919	ProperStrand	137	1	-10.1507
chr17	45803305	45803395	protein_coding	Tmem63b	exon	ENSMUSG00000036026	NonProperStrand	3	chr16	11144108	11144198	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	1	-16.8957
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr8	98270085	98270115	protein_coding	Cnot1	intron	ENSMUSG00000036550	ProperStrand	315	1	-1.9660
chr6	94776848	94776877	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	chr12	88778653	88778722	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	4	-9.0485
chr3	102953142	102956248	protein_coding	Dennd2c	exon	ENSMUSG00000007379	ProperStrand	19	chr12	112779254	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-7.0511
chr11	97642952	97643049	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	chr2	158184122	158184209	snoRNA	ENSMUSG00000064995_SNORA71	.	ENSMUSG00000064995	ProperStrand	430	7	-3.7001
chr3	32238725	32238798	protein_coding	Zmat3	utr3	ENSMUSG00000027663	ProperStrand	62	chr15	34370593	34370625	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	4	-11.6762
chr11	59307332	59313118	protein_coding	Zkscan17	exon	ENSMUSG00000020472	ProperStrand	23	chr10	110918549	110918629	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-8.7155
chrX	91434919	91434979	protein_coding	Eif2s3x	utr3	ENSMUSG00000035150	ProperStrand	55	chr16	23111767	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.0428
chr8	122046425	122046441	protein_coding	Mbtps1	exon	ENSMUSG00000031835	NonProperStrand	16	chr16	23110909	23111781	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.9771
chr8	34908143	34908179	protein_coding	Rbpms	intron	ENSMUSG00000031586	ProperStrand	58	chr3	123210854	123210870	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.1217
chr1	162966189	162966252	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	chr11	116938557	116938647	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	6	-8.3906
chr7	86524984	86526528	protein_coding	Rlbp1	exon	ENSMUSG00000039194	ProperStrand	4	chr3	123210854	123210871	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-7.3786
chr14	121334419	121335683	protein_coding	Ipo5	exon	ENSMUSG00000030662	ProperStrand	135	chr7	117189966	117190046	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	4	-7.4238
chr18	42381213	42381261	protein_coding	Lars	exon	ENSMUSG00000024493	ProperStrand	69	chr9	15118245	15118321	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.2118
chr15	79004977	79005042	antisense	Gm10863	.	ENSMUSG00000075555	ProperStrand	6	chr11	102536494	102536527	protein_coding	Gm1564	exon	ENSMUSG00000051455	ProperStrand	3	1	-inf
chr9	115983106	115983122	protein_coding	Gadl1	exon	ENSMUSG00000056880	NonProperStrand	4	chr10	23505152	23505215	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-6.2798
chr3	94386341	94386431	protein_coding	Snx27	exon	ENSMUSG00000028136	ProperStrand	24	chr6	115758036	115758116	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-7.2924
chr2	34629609	34631694	protein_coding	Hspa5	exon	ENSMUSG00000026864	ProperStrand	181	chr11	69483162	69483272	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-2.7828
chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	chr5	121798933	121798982	protein_coding	Gm15800	exon	ENSMUSG00000042744	ProperStrand	47	1	-9.8887
chr5	45083103	45083119	protein_coding	Ldb2	intron	ENSMUSG00000039706	NonProperStrand	15	chr5	121655127	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-6.4555
chr16	23766772	23766791	LINE	L1MEf	L1	chr16L1MEf23766685	ProperStrand	1	chr11	57322929	57322947	protein_coding	Fam114a2	exon	ENSMUSG00000020523	ProperStrand	25	1	-inf
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr18	12172461	12172477	protein_coding	6030446N20Rik	intron	ENSMUSG00000049411	ProperStrand	235	3	-5.5339
chr15	98350202	98350282	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	chr13	90238633	90238723	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	1	-0.8783
chr19	47938890	47938916	protein_coding	Gsto1	exon	ENSMUSG00000025068	ProperStrand	2	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	1	-14.4896
chr9	46020416	46020439	protein_coding	Sik3	exon	ENSMUSG00000034135	ProperStrand	49	chr7	29136525	29136596	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-4.7497
chr19	16605155	16605173	protein_coding	Gna14	intron	ENSMUSG00000024697	NonProperStrand	3	chr16	23110841	23110872	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr11	88790624	88791593	protein_coding	Scpep1	exon	ENSMUSG00000000278	ProperStrand	54	chr5	121655020	121655100	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.9447
chr6	108804424	108805502	protein_coding	Edem1	exon	ENSMUSG00000030104	ProperStrand	18	chr1	181027187	181027205	protein_coding	Smyd3	intron	ENSMUSG00000055067	ProperStrand	231	1	-13.0562
chr5	77711411	77711482	protein_coding	Rest	exon	ENSMUSG00000029249	ProperStrand	136	chr13	55561283	55561383	protein_coding	Grk6	utr3	ENSMUSG00000074886	ProperStrand	13	1	-14.7826
chr2	143780491	143780522	protein_coding	Rrbp1	exon	ENSMUSG00000027422	ProperStrand	76	chr1	162966000	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-3.1713
chr12	30604781	30604797	protein_coding	Myt1l	exon	ENSMUSG00000061911	ProperStrand	38	chr18	35714144	35714209	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.2993
chr5	111111989	111184497	protein_coding	Ep400	exon	ENSMUSG00000029505	ProperStrand	176	chr18	35716763	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	8	-9.6946
chr2	118753583	118753606	protein_coding	Chst14	utr3	ENSMUSG00000074916	ProperStrand	32	chr8	98269959	98269998	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-6.7852
chr11	94920673	94920958	protein_coding	Itga3	exon	ENSMUSG00000001507	ProperStrand	21	chr3	123210878	123210896	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.9390
chr7	106628472	106628548	protein_coding	Rps3	exon	ENSMUSG00000030744	ProperStrand	159	chr5	122691914	122691930	protein_coding	Hvcn1	utr3	ENSMUSG00000064267	ProperStrand	182	1	-9.1337
chr5	118376503	118376519	protein_coding	Nos1	exon	ENSMUSG00000029361	NonProperStrand	237	chr9	120037932	120037977	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-2.2168
chr8	87426786	87426804	protein_coding	Klf1	exon	ENSMUSG00000054191	NonProperStrand	70	chr16	23111383	23111448	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.0543
chr6	115757991	115758117	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr8	32260335	32260441	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	35	-inf
chr13	23714215	23714270	protein_coding	Hist1h1e	exon	ENSMUSG00000051627	ProperStrand	41	chr1	162967490	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	3	-10.1666
chr10	82318641	82318731	protein_coding	Txnrd1	intron	ENSMUSG00000020250	ProperStrand	47	chr4	34752954	34753036	protein_coding	Zfp292	exon	ENSMUSG00000039967	ProperStrand	45	5	-inf
chr11	102371506	102371555	protein_coding	Gpatch8	intron	ENSMUSG00000034621	ProperStrand	49	chr18	35714144	35714251	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-3.8183
chr17	23955822	23955838	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	chr9	120038478	120038568	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-2.8515
chr14	108852072	108852093	LINE	Lx5	L1	chr14Lx5108851555	ProperStrand	1	chr11	111307995	111308017	LTR	MTD	MaLR	chr11MTD111307967	ProperStrand	1	1	-inf
chr2	32563526	32563545	protein_coding	Cdk9	exon	ENSMUSG00000009555	NonProperStrand	49	chr15	34370576	34370666	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	4	-12.8519
chr8	23287720	23287820	protein_coding	Ckap2	exon	ENSMUSG00000037725	ProperStrand	69	chr5	130300432	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-4.0525
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	9018593	9020258	protein_coding	Mta2	exon	ENSMUSG00000071646	ProperStrand	70	1	-4.1696
chrX	101476503	101476520	protein_coding	Abcb7	utr3	ENSMUSG00000031333	NonProperStrand	4	chr10	23505189	23505279	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-6.2798
chr1	65308990	65309070	protein_coding	Pikfyve	intron	ENSMUSG00000025949	ProperStrand	59	chr13	17810214	17810304	protein_coding	Cdk13	exon	ENSMUSG00000041297	ProperStrand	29	1	-14.8240
chr11	3034590	3034690	protein_coding	Sfi1	utr3	ENSMUSG00000023764	ProperStrand	17	chr16	23110555	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.8009
chr2	70927899	70927915	protein_coding	Dcaf17	exon	ENSMUSG00000041966	NonProperStrand	89	chr12	106269468	106269558	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-3.4067
chr6	90235741	90235831	SINE	B1_Mus2	Alu	chr6B1_Mus290235670	NonProperStrand	1	chr5	35042047	35042137	protein_coding	Grk4	utr3	ENSMUSG00000052783	NonProperStrand	3	1	-inf
chr5	122854212	122854229	protein_coding	Arpc3	exon	ENSMUSG00000029465	NonProperStrand	33	chr17	35087921	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-6.3771
chr16	30514154	30514171	protein_coding	Tmem44	utr3	ENSMUSG00000022537	ProperStrand	217	chr17	56702847	56702967	protein_coding	Safb2	exon	ENSMUSG00000042625	ProperStrand	29	1	-12.2059
chr2	90235285	90235345	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	7	-5.1618
chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr2	138188029	138188045	protein_coding	Btbd3	intron	ENSMUSG00000062098	NonProperStrand	121	1	-2.3495
chr6	113765841	113765857	protein_coding	Atp2b2	intron	ENSMUSG00000030302	NonProperStrand	14	chr9	45988332	45988360	protein_coding	Sik3	intron	ENSMUSG00000034135	ProperStrand	49	1	-16.7620
chr16	57678485	57678503	protein_coding	Col8a1	utr5	ENSMUSG00000068196	NonProperStrand	3	chr11	69483184	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-14.4332
chr17	13171026	13171054	protein_coding	Wtap	intron	ENSMUSG00000060475	ProperStrand	119	chr11	6428077	6428154	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.0161
chr5	147889190	147889245	protein_coding	Polr1d	utr5	ENSMUSG00000029642	ProperStrand	23	chrX	71517823	71517913	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-8.4683
chr10	41305590	41305606	protein_coding	Ccdc162	intron	ENSMUSG00000075225	ProperStrand	6	chr15	34370620	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-13.3025
chr13	96100595	96100685	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	2	-1.6392
chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	chr1	102076761	102076790	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	1	-5.6507
chr6	72525646	72525684	protein_coding	Elmod3	exon	ENSMUSG00000056698	ProperStrand	2	chr8	32260350	32260440	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-12.0137
chr15	34207269	34213131	protein_coding	Laptm4b	exon	ENSMUSG00000022257	ProperStrand	24	chrX	34622911	34622991	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-4.9020
chr7	134655968	134655987	protein_coding	Srcap	intron	ENSMUSG00000053877	NonProperStrand	2	chr9	120038491	120038519	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-10.2959
chr15	78504284	78504301	protein_coding	Elfn2	exon	ENSMUSG00000043460	NonProperStrand	20	chr7	52085321	52085343	protein_coding	Nup62	exon	ENSMUSG00000043858	ProperStrand	47	1	-16.0843
chr7	11504022	11504102	LTR	RLTR12B	ERVK	chr7RLTR12B11503802	ProperStrand	1	chr15	86179739	86179829	protein_coding	Tbc1d22a	intron	ENSMUSG00000051864	ProperStrand	15	1	-inf
chr6	91051281	91051364	protein_coding	Nup210	exon	ENSMUSG00000030091	ProperStrand	140	chr8	98269959	98270010	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-3.9180
chr6	71539190	71539261	protein_coding	Kdm3a	utr3	ENSMUSG00000053470	ProperStrand	41	chr11	69483238	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.1191
chr15	90086767	90086831	LTR	ORR1A3	MaLR	chr15ORR1A390086574	ProperStrand	1	chr16	23110853	23110915	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr1	187205814	187205839	protein_coding	Eprs	exon	ENSMUSG00000026615	ProperStrand	149	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	1	-5.2406
chrX	140777241	140777341	protein_coding-noncoding	Alg13	utr3	ENSMUSG00000041718	ProperStrand	87	chr16	56035864	56035927	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	1	-8.2018
chr11	97239856	97239877	protein_coding	Socs7	exon	ENSMUSG00000038485	ProperStrand	12	chr11	5682123	5682139	pseudogene	2210015D19Rik	.	ENSMUSG00000083844	ProperStrand	24	1	-18.2317
chr10	20080841	20080860	protein_coding	Fam54a	utr3	ENSMUSG00000019992	ProperStrand	232	chr4	131865855	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-1.8117
chr9	78326332	78326374	protein_coding	Eef1a1	utr3	ENSMUSG00000037742	ProperStrand	1990	chr2	91436226	91436324	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	2	-2.2551
chr11	50665154	50665244	protein_coding-noncoding	Grm6	utr5	ENSMUSG00000000617	ProperStrand	1	chr11	50665055	50665135	protein_coding	Grm6	exon	ENSMUSG00000000617	ProperStrand	3	1	-inf
chr10	90582948	90583048	protein_coding-noncoding	Slc25a3	utr3	ENSMUSG00000061904	ProperStrand	13	chr15	34370543	34370603	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-6.5354
chr8	98389064	98389111	protein_coding	Got2	exon	ENSMUSG00000031672	ProperStrand	85	chr16	23110455	23110519	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	6	-11.9469
chr16	57391759	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr9	65940596	65940635	protein_coding	Snx1	intron	ENSMUSG00000032382	ProperStrand	7	1	-12.2103
chr4	33052142	33052232	pseudogene	Gm11942	.	ENSMUSG00000059634	ProperStrand	27	chr11	6428086	6428172	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	9	-23.0274
chr2	135902628	135902646	LTR	RMER15-int	ERVL	chr2RMER15-int135902100	NonProperStrand	6	chr1	34220922	34220965	protein_coding	Dst	exon	ENSMUSG00000026131	ProperStrand	461	1	-13.9827
chr8	97346704	97346808	protein_coding	Ciapin1	utr3	ENSMUSG00000031781	ProperStrand	24	chr15	5068443	5068479	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-7.8973
chr3	96218581	96218694	misc_RNA	Telomerase-vert	.	ENSMUSG00000064796	ProperStrand	443	chr5	124801090	124801106	protein_coding	Cdk2ap1	intron	ENSMUSG00000029394	NonProperStrand	15	1	-12.1283
chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	chr14	55598181	55598259	protein_coding	Myh7	exon	ENSMUSG00000053093	ProperStrand	1	1	-inf
chr15	79248651	79248711	protein_coding	Csnk1e	utr3	ENSMUSG00000022433	ProperStrand	59	chr11	62416994	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-6.0762
chr13	81664449	81664465	protein_coding	Gpr98	exon	ENSMUSG00000069170	NonProperStrand	22	chr7	116664819	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-7.3725
chr11	5301464	5301540	protein_coding	Znrf3	intron	ENSMUSG00000041961	ProperStrand	63	chr4	131908236	131908298	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.3492
chr13	39034953	39035024	protein_coding	Slc35b3	exon	ENSMUSG00000021432	ProperStrand	27	chr11	68886975	68887035	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	2	-9.3271
chr17	46814084	46814100	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr11	5015381	5015429	protein_coding	Emid1	intron	ENSMUSG00000034164	ProperStrand	14	1	-12.1915
chr14	14991828	14991908	LINE	L1_Mus2	L1	chr14L1_Mus214991303	ProperStrand	1	chr14	14992275	14992365	LINE	L1_Mus2	L1	chr14L1_Mus214992237	ProperStrand	1	1	-inf
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	66468409	66468427	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	2	-2.7557
chr9	72510384	72595892	protein_coding	Nedd4	exon	ENSMUSG00000032216	ProperStrand	308	chr2	26494708	26494826	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	5	-4.7916
chr14	31381359	31381411	protein_coding	Tkt	exon	ENSMUSG00000021957	ProperStrand	160	chr16	23110456	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-3.1714
chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	chr9	20699554	20699596	protein_coding	Eif3g	exon	ENSMUSG00000070319	ProperStrand	38	1	-10.1077
chr9	100966289	100966307	SINE	B4A	B4	chr9B4A100966214	ProperStrand	51	chr17	71990923	71990997	snoRNA	ENSMUSG00000092713_CT010429.1	.	ENSMUSG00000092713	ProperStrand	182	1	-11.4148
chr8	34944693	34944728	protein_coding	Rbpms	intron	ENSMUSG00000031586	ProperStrand	58	chr17	24857784	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.3538
chr13	8756716	8766309	protein_coding	Adarb2	utr3	ENSMUSG00000052551	ProperStrand	292	chr9	120039533	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	7	-8.9651
chr12	52865101	52868602	protein_coding	Hectd1	exon	ENSMUSG00000035247	ProperStrand	41	chr7	116663716	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.1845
chr4	136210344	136210401	protein_coding	Ephb2	utr3	ENSMUSG00000028664	ProperStrand	21	chr1	162967537	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-5.4889
chr9	15119630	15119968	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	chr11	98878342	98878472	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	94	-19.3812
chr2	163879516	163879606	protein_coding	Tomm34	utr3	ENSMUSG00000018322	ProperStrand	10	chr4	131865856	131865936	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.0395
chr12	81297393	81297931	protein_coding	Actn1	exon	ENSMUSG00000015143	ProperStrand	128	chr11	69483190	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.2717
chr2	90235285	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr18	37911790	37911806	protein_coding	Pcdhga9	intron	ENSMUSG00000023036	ProperStrand	245	4	-7.4524
chr7	52309977	52309993	protein_coding	Prrg2	exon	ENSMUSG00000007837	NonProperStrand	281	chr2	72784729	72784760	protein_coding	Sp3	exon	ENSMUSG00000027109	ProperStrand	11	1	-13.6853
chr14	75511523	75511544	protein_coding	Lrrc63	intron	ENSMUSG00000021997	NonProperStrand	3	chr11	97642952	97643089	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-inf
chr6	79193893	79193909	LTR	ORR1C2-int	MaLR	chr6ORR1C2-int79193055	ProperStrand	8	chr8	129468747	129468799	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-8.4652
chr5	141090405	141090422	protein_coding	Lfng	exon	ENSMUSG00000029570	NonProperStrand	92	chr11	6428088	6428156	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.4416
chr7	134341340	134341357	protein_coding	Tbc1d10b	utr3	ENSMUSG00000042492	ProperStrand	187	chr17	35089182	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	2	-5.6858
chr2	127861830	127861848	protein_coding	Acoxl	intron	ENSMUSG00000027380	NonProperStrand	12	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.6729
chr17	12585979	12585995	protein_coding	Plg	exon	ENSMUSG00000059481	ProperStrand	86	chr15	98356818	98356917	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	1	-7.0373
chr1	183772087	183772119	protein_coding	Lbr	intron	ENSMUSG00000004880	ProperStrand	97	chr19	28372939	28372956	protein_coding	Glis3	intron	ENSMUSG00000091294	ProperStrand	5	1	-17.5195
chr12	39229089	39229108	protein_coding	Dgkb	intron	ENSMUSG00000036095	ProperStrand	19	chr17	13112511	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-6.8483
chr4	86502170	86502211	protein_coding	Rps6	exon	ENSMUSG00000028495	ProperStrand	263	chr17	35087920	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	9	-inf
chrX	72214248	72214264	protein_coding-noncoding	Gab3	utr3	ENSMUSG00000032750	ProperStrand	420	chr17	35087944	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-1.7164
chr12	86562543	86562582	protein_coding	Eif2b2	exon	ENSMUSG00000004788	ProperStrand	15	chr16	23110905	23111000	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.0842
chr1	136525273	136527043	protein_coding	Kdm5b	exon	ENSMUSG00000042207	ProperStrand	223	chr5	121655021	121655101	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-1.5174
chr6	87769189	87769558	protein_coding	Isy1	exon	ENSMUSG00000030056	ProperStrand	172	chr5	54389949	54389965	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	1	-8.6726
chr7	152049484	152049574	protein_coding	Fgf4	utr3	ENSMUSG00000050917	ProperStrand	66	chr4	116827119	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-6.8510
chr14	47004260	47004359	protein_coding	Bmp4	exon	ENSMUSG00000021835	ProperStrand	5	chr2	26494708	26494755	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	4	-18.7502
chr11	75153883	75154542	protein_coding	Rpa1	exon	ENSMUSG00000000751	ProperStrand	37	chr13	63612936	63612952	protein_coding	Ptch1	exon	ENSMUSG00000021466	NonProperStrand	118	1	-12.9307
chr18	58839430	58839451	LTR	MLT1E2	MaLR	chr18MLT1E258839333	NonProperStrand	4	chr10	23505149	23505268	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-inf
chrX	70164014	70171721	protein_coding	Nsdhl	utr5	ENSMUSG00000031349	ProperStrand	10	chr12	112779254	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	6	-19.2484
chr19	5796879	5796914	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr7	52382752	52382807	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-1.4977
chr17	6986980	6987037	protein_coding	Ezr	utr5	ENSMUSG00000052397	ProperStrand	126	chr1	162965570	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-3.6102
chr11	6297100	6297200	protein_coding	Zmiz2	exon	ENSMUSG00000041164	ProperStrand	69	chr9	64022860	64022901	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-7.7462
chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	chr17	27559700	27559717	protein_coding	Grm4	utr3	ENSMUSG00000063239	ProperStrand	147	1	-7.3997
chr3	137586261	137586322	protein_coding	Lamtor3	intron	ENSMUSG00000091512	ProperStrand	5	chr16	23110909	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-11.1940
chr14	118929107	118964247	protein_coding	Abcc4	intron	ENSMUSG00000032849	ProperStrand	137	chr16	23111689	23111753	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-1.5835
chr7	13846274	13846290	protein_coding	6330408A02Rik	utr3	ENSMUSG00000070814	ProperStrand	10	chr17	13112451	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-8.1682
chr11	6297231	6297284	protein_coding	Zmiz2	exon	ENSMUSG00000041164	ProperStrand	69	chr7	117166757	117166857	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	8	-19.5824
chr4	132752770	132752850	protein_coding	Wasf2	utr3	ENSMUSG00000028868	ProperStrand	56	chr1	89673695	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-3.3892
chr10	19980874	19980901	protein_coding	Mtap7	intron	ENSMUSG00000019996	ProperStrand	43	chr4	131908745	131908835	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.7076
chr6	115594654	115626337	protein_coding	Raf1	utr5	ENSMUSG00000000441	ProperStrand	30	chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	3	-17.5100
chr15	77597661	77597751	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr4	131865413	131865493	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	5	-4.2098
chr2	158185529	158185554	lincRNA	9430008C03Rik	exon	ENSMUSG00000085385	ProperStrand	1039	chr5	92485086	92485186	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	2	-5.5010
chr11	88880763	88880828	protein_coding	Trim25	utr3	ENSMUSG00000000275	ProperStrand	50	chr5	132061763	132061780	protein_coding	Auts2	intron	ENSMUSG00000029673	NonProperStrand	37	1	-14.6604
chr17	26360945	26360970	protein_coding	Itfg3	intron	ENSMUSG00000024187	NonProperStrand	4	chr7	117189933	117189992	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-8.8371
chr1	133252370	133252450	protein_coding	Srgap2	intron	ENSMUSG00000026425	ProperStrand	299	chr17	24857760	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-0.6937
chr3	75452781	75452871	LINE	Lx2B	L1	chr3Lx2B75452300	ProperStrand	6	chr3	75459324	75459404	LTR	ETnERV2-int	ERVK	chr3ETnERV2-int75458125	ProperStrand	4	3	-19.3245
chr4	59498547	59501011	protein_coding	Rod1	exon	ENSMUSG00000028382	ProperStrand	52	chr1	162967494	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-3.7393
chr11	99885311	99885327	protein_coding	Krt33b	exon	ENSMUSG00000057723	NonProperStrand	352	chr7	52382778	52382830	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-3.3577
chr16	48287825	48287886	protein_coding	Dppa4	intron	ENSMUSG00000058550	ProperStrand	13	chr7	52382753	52382802	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-9.8481
chr8	8683166	8683212	protein_coding	Arglu1	intron	ENSMUSG00000040459	ProperStrand	20	chr18	35716764	35716854	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.1514
chr4	53873624	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	chr6	52589227	52589342	snoRNA	ENSMUSG00000064792_SNORA32	.	ENSMUSG00000064792	ProperStrand	151	1	-7.2047
chr2	158184128	158184208	snoRNA	ENSMUSG00000064995_SNORA71	.	ENSMUSG00000064995	ProperStrand	430	chr2	158182180	158182270	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-1.5278
chr14	17249534	17250916	protein_coding	Top2b	exon	ENSMUSG00000017485	ProperStrand	24	chr4	56910538	56910628	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	8	-19.5320
chr5	74489543	74489586	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr9	65127126	65127142	protein_coding	Cilp	exon	ENSMUSG00000042254	ProperStrand	212	1	-3.2318
chr2	66134829	66134845	protein_coding	Scn1a	exon	ENSMUSG00000064329	NonProperStrand	5	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-8.1751
chr5	74489264	74489326	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr9	63868722	63868738	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	1	-1.4226
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr7	13896665	13896710	protein_coding	Lig1	utr3	ENSMUSG00000056394	ProperStrand	89	1	-6.4525
chr2	180424192	180424218	protein_coding	Dido1	exon	ENSMUSG00000038914	ProperStrand	81	chr4	131866163	131866292	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-5.3643
chr4	131908357	131908457	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr5	130295502	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	4	-2.5995
chr14	55717539	55717556	protein_coding	Thtpa	utr3	ENSMUSG00000045691	ProperStrand	8	chr11	116938651	116938693	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-10.2670
chrX	84483698	84483752	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr13	53073980	53073997	protein_coding	Nfil3	intron	ENSMUSG00000056749	NonProperStrand	66	1	-8.0584
chr16	38158131	38158221	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	chr18	35714214	35716840	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	3	-1.1308
chr11	48615536	48615601	snoRNA	ENSMUSG00000064725_Snord96a	.	ENSMUSG00000064725	ProperStrand	89	chr3	123210852	123210942	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.4585
chr7	13516166	13516203	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr1	88252837	88252902	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	2	-4.0684
chrX	152009278	152009294	protein_coding	Ptchd1	exon	ENSMUSG00000041552	NonProperStrand	294	chr5	136385792	136385810	protein_coding	Ywhag	utr3	ENSMUSG00000051391	ProperStrand	142	1	-8.4037
chr7	140925659	140925749	protein_coding	Dhx32	exon	ENSMUSG00000030986	ProperStrand	100	chr19	8800377	8800457	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-2.6163
chr13	104535002	104535070	protein_coding	Srek1	intron	ENSMUSG00000032621	ProperStrand	41	chr4	53873600	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	1	-9.8113
chr7	48261048	48261138	LINE	L1_Mur2	L1	chr7L1_Mur248260602	NonProperStrand	1	chr7	48261239	48261319	LINE	Lx2B	L1	chr7Lx2B48261152	ProperStrand	1	1	-inf
chrX	49781724	49781750	protein_coding	Gpc3	exon	ENSMUSG00000055653	ProperStrand	43	chr7	117189909	117190009	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.9505
chr2	104504974	104504991	protein_coding	Cstf3	exon	ENSMUSG00000027176	ProperStrand	19	chr15	34370619	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-5.7679
chr7	134850725	134850815	protein_coding	Bcl7c	exon	ENSMUSG00000030814	ProperStrand	15	chr16	23110833	23110913	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.0842
chr7	72481391	72481452	protein_coding	Tjp1	exon	ENSMUSG00000030516	ProperStrand	78	chr9	120038564	120038654	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	4	-9.2273
chr17	13115687	13115787	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	chr8	98269959	98270013	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-0.7041
chr8	24559878	24559894	protein_coding	Sfrp1	utr3	ENSMUSG00000031548	NonProperStrand	10	chr1	162968441	162968486	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-9.7124
chr11	83107809	83107899	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	chr12	92811869	92811956	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	1	-4.1909
chr1	135518734	135519655	protein_coding	Zc3h11a	exon	ENSMUSG00000026464	ProperStrand	102	chr10	107800796	107800832	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	4	-19.9130
chr12	17705900	17706007	protein_coding	Hpcal1	intron	ENSMUSG00000071379	ProperStrand	51	chr16	23111389	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	14	-20.8929
chr17	29175352	29175374	protein_coding	Srsf3	intron	ENSMUSG00000071172	ProperStrand	23	chr14	76247754	76247791	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-6.0408
chr16	35981701	35981731	antisense	Gm15564	.	ENSMUSG00000086324	ProperStrand	6	chr12	78511129	78511194	protein_coding	Fut8	intron	ENSMUSG00000021065	ProperStrand	3	1	-inf
chr7	88489430	88489446	protein_coding	Rps17	intron	ENSMUSG00000061787	ProperStrand	105	chr19	8963086	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.4033
chr7	117189862	117189954	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr9	120038520	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	17	-2.5816
chr17	47943489	47943507	LTR	MLT1J	MaLR	chr17MLT1J47943258	ProperStrand	8	chr16	57391761	57391792	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	1	-11.9228
chr13	50016058	50016075	LTR	MTE2b	MaLR	chr13MTE2b50015909	ProperStrand	1	chr7	117166765	117166824	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-inf
chr6	54379743	54379760	lincRNA	9130019P16Rik	exon	ENSMUSG00000073067	ProperStrand	255	chr7	135883867	135883970	protein_coding	Mcmbp	utr5	ENSMUSG00000048170	ProperStrand	87	1	-9.6665
chr11	76868385	76868459	protein_coding-noncoding	Ccdc55	utr3	ENSMUSG00000037958	ProperStrand	3	chr14	76247799	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	3	-inf
chrX	98867859	98868400	protein_coding	Ogt	exon	ENSMUSG00000034160	ProperStrand	49	chr1	162965539	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.6485
chr17	25406382	25406412	protein_coding	Ube2i	exon	ENSMUSG00000015120	ProperStrand	20	chr5	134876359	134876376	protein_coding	Gtf2ird1	intron	ENSMUSG00000023079	NonProperStrand	8	1	-18.9291
chr12	79691560	79691576	protein_coding	Gphn	exon	ENSMUSG00000047454	NonProperStrand	5	chr11	6428060	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-8.1751
chr2	46113527	46113545	LINE	Lx4A	L1	chr2Lx4A46113351	ProperStrand	1	chr15	55625969	55625986	protein_coding	Sntb1	intron	ENSMUSG00000060429	NonProperStrand	6	1	-inf
chr7	26496729	26496751	protein_coding	Ccdc97	utr3	ENSMUSG00000002608	ProperStrand	10	chr4	116862644	116862663	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	1	-12.5050
chr15	68012619	68012635	protein_coding	Zfat	exon	ENSMUSG00000022335	NonProperStrand	25	chr4	149012475	149015796	protein_coding	Clstn1	exon	ENSMUSG00000039953	ProperStrand	173	1	-12.9621
chr17	26115589	26115606	protein_coding	Solh	intron	ENSMUSG00000037326	ProperStrand	53	chr4	116828404	116828429	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-8.6310
chr6	115757989	115758132	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr11	97642952	97643095	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	25	-0.8196
chr12	88600121	88600152	protein_coding	Vipar	exon	ENSMUSG00000021038	ProperStrand	9	chr4	131908260	131908298	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-8.1084
chr11	115999916	115999932	protein_coding	Mrpl38	exon	ENSMUSG00000020775	NonProperStrand	65	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-5.0562
chrX	12700472	12700562	protein_coding	Usp9x	exon	ENSMUSG00000031010	ProperStrand	174	chrX	34622932	34623012	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-1.4194
chr18	10052131	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr2	130109497	130109513	protein_coding	Idh3b	exon	ENSMUSG00000027406	ProperStrand	146	1	-7.0292
chr13	6583866	6585735	protein_coding	Pfkp	exon	ENSMUSG00000021196	ProperStrand	197	chrX	34622927	34623007	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-1.2461
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr3	134924498	134924514	protein_coding	Cenpe	exon	ENSMUSG00000045328	ProperStrand	71	1	-8.3788
chr7	105194501	105194520	protein_coding	Gdpd4	intron	ENSMUSG00000035582	NonProperStrand	7	chr2	158182195	158182278	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-9.3654
chr9	95524998	95525035	snoRNA	ENSMUSG00000065346_SNORA4	.	ENSMUSG00000065346	ProperStrand	142	chr14	33005109	33005179	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-2.4440
chr18	66220333	66220423	protein_coding-noncoding	Ccbe1	utr3	ENSMUSG00000046318	ProperStrand	1	chr18	66220570	66220660	protein_coding	Ccbe1	utr3	ENSMUSG00000046318	ProperStrand	7	1	-inf
chr6	91707603	91707621	protein_coding	Slc6a6	utr3	ENSMUSG00000030096	NonProperStrand	2	chr4	131908356	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-8.3123
chr5	137740013	137740057	protein_coding	Srrt	exon	ENSMUSG00000037364	ProperStrand	31	chr11	83107806	83107896	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	1	-10.1673
chr10	82456766	82456784	protein_coding	Chst11	intron	ENSMUSG00000034612	ProperStrand	170	chr4	131865885	131865983	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.0419
chr5	118404770	118404860	protein_coding	Nos1	utr3	ENSMUSG00000029361	ProperStrand	11	chr16	23110914	23110998	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-4.7202
chr13	64863287	64863304	protein_coding	Cntnap3	exon	ENSMUSG00000033063	ProperStrand	87	chr3	123210852	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	4	-6.1642
chr2	26767046	26767583	protein_coding	Rpl7a	exon	ENSMUSG00000062647	ProperStrand	234	chr1	39605613	39605693	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-4.6797
chr5	34214904	34214920	protein_coding	Whsc1	utr3	ENSMUSG00000057406	ProperStrand	409	chr7	150717298	150717425	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-2.0055
chr3	61520301	61520323	LTR	RLTR20A	ERVK	chr3RLTR20A61520125	NonProperStrand	1	chr11	95822313	95822343	protein_coding	Igf2bp1	utr3	ENSMUSG00000013415	ProperStrand	140	1	-inf
chr9	96985530	96985605	protein_coding-noncoding	Slc25a36	utr3	ENSMUSG00000032449	ProperStrand	10	chr14	76247710	76247767	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	3	-17.6126
chr15	76276958	76277005	protein_coding	Heatr7a	exon	ENSMUSG00000022558	ProperStrand	48	chr19	8963027	8963124	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.6557
chr4	95478865	95478890	protein_coding-noncoding	Fggy	utr3	ENSMUSG00000028573	NonProperStrand	2	chr11	87240280	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	2	-inf
chr7	28146782	28146798	protein_coding	Spnb4	exon	ENSMUSG00000011751	NonProperStrand	84	chr4	116826700	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	2	-9.9289
chr11	120148960	120148976	protein_coding	Bahcc1	exon	ENSMUSG00000039741	NonProperStrand	268	chr11	62416578	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-2.4115
chr8	125007103	125007272	protein_coding	Fam38a	exon	ENSMUSG00000014444	ProperStrand	132	chr11	116938627	116938717	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	2	-7.6668
chr16	85025691	85030515	protein_coding	App	exon	ENSMUSG00000022892	ProperStrand	11	chr1	88247791	88247871	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-8.5056
chr7	122966867	122966884	protein_coding	Sox6	intron	ENSMUSG00000051910	ProperStrand	18	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-8.2541
chr11	120134653	120134734	protein_coding	Bahcc1	exon	ENSMUSG00000039741	ProperStrand	118	chr7	134671421	134671511	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-6.5289
chr11	69870769	69870785	protein_coding	Asgr1	exon	ENSMUSG00000020884	NonProperStrand	145	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.7778
chr5	115939511	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr3	123210854	123210930	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	9	-0.7620
chr7	129302779	129302869	antisense	Gm15489	.	ENSMUSG00000086942	ProperStrand	2	chr7	129303202	129303282	protein_coding	Plk1	exon	ENSMUSG00000030867	NonProperStrand	3	1	-inf
chr9	4299367	4302483	protein_coding	Aasdhppt	exon	ENSMUSG00000025894	ProperStrand	121	chr9	15118322	15118375	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-2.2355
chr11	115658923	115659164	protein_coding	2310067B10Rik	exon	ENSMUSG00000020747	ProperStrand	74	chr9	72594269	72594985	protein_coding	Nedd4	exon	ENSMUSG00000032216	ProperStrand	308	1	-9.6141
chr11	12137290	12137356	protein_coding	Cobl	utr3	ENSMUSG00000020173	ProperStrand	133	chr11	69483141	69483231	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.2195
chr19	9042726	9052632	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	chr10	23505152	23505285	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	10	-2.1050
chr12	84887951	84887984	protein_coding	Zfyve1	utr3	ENSMUSG00000042628	ProperStrand	28	chr11	79950546	79950563	protein_coding	1110002N22Rik	utr3	ENSMUSG00000046909	ProperStrand	45	1	-15.4247
chr11	116535476	116535541	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr14	73685353	73685378	protein_coding	Rb1	intron	ENSMUSG00000022105	NonProperStrand	3	1	-12.2431
chr7	26149930	26150018	protein_coding	Megf8	utr3	ENSMUSG00000045039	ProperStrand	100	chr8	129468767	129468857	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-3.4576
chr1	92689614	92689630	protein_coding	Col6a3	exon	ENSMUSG00000048126	ProperStrand	79	chr11	106362639	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-6.8577
chr10	107800766	107800854	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	chr12	110874223	110874290	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	3	-11.3376
chr5	31554603	31554816	protein_coding	Krtcap3	exon	ENSMUSG00000029149	ProperStrand	2	chr4	131908356	131908418	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-8.3123
chr13	58493692	58493729	protein_coding	Hnrnpk	utr3	ENSMUSG00000021546	ProperStrand	117	chr16	23110551	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-4.1692
chr2	158182164	158182292	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	chr11	62416951	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	5	-1.1153
chr7	28176523	28176590	protein_coding	Spnb4	exon	ENSMUSG00000011751	ProperStrand	39	chr9	69974080	69989171	protein_coding	Fam81a	utr5	ENSMUSG00000032224	ProperStrand	59	1	-14.2122
chr13	45016405	45016445	protein_coding	Jarid2	utr3	ENSMUSG00000038518	ProperStrand	372	chr9	96649951	96649968	protein_coding	E030011O05Rik	intron	ENSMUSG00000048790	NonProperStrand	1	1	-inf
chr14	119693352	119693368	protein_coding	Hs6st3	intron	ENSMUSG00000053465	NonProperStrand	134	chr8	20006078	20006143	pseudogene	2610005L07Rik	.	ENSMUSG00000071793	ProperStrand	40	1	-12.5194
chr3	85933487	85933507	protein_coding	Sh3d19	utr3	ENSMUSG00000028082	ProperStrand	58	chr19	8798769	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-4.8665
chrX	45610105	45610123	protein_coding	Utp14a	utr5	ENSMUSG00000063785	ProperStrand	22	chr2	26768049	26768110	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	1	-10.4207
chr2	93945613	93945633	protein_coding	Hsd17b12	intron	ENSMUSG00000027195	NonProperStrand	3	chr4	121870894	122132506	pseudogene	Gm12896	.	ENSMUSG00000083558	NonProperStrand	19	1	-inf
chr10	77888460	77888540	protein_coding	Cstb	utr5	ENSMUSG00000005054	ProperStrand	10	chr7	133700319	133700409	protein_coding	Eif3c	exon	ENSMUSG00000030738	ProperStrand	92	4	-inf
chr3	22110878	22110922	protein_coding	Tbl1xr1	utr3	ENSMUSG00000027630	NonProperStrand	10	chr18	35716703	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	7	-inf
chr2	26493366	26493496	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr17	23687229	23687256	tRNA	tRNA994-ArgCCG	.	188646	ProperStrand	60	3	-9.2194
chr14	52816779	52816795	protein_coding	Supt16h	exon	ENSMUSG00000035726	ProperStrand	193	chr8	129468800	129468852	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-2.3030
chr17	35189988	35192175	protein_coding	Clic1	exon	ENSMUSG00000007041	ProperStrand	12	chr16	23111452	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.0123
chr19	44188368	44188545	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr5	121655052	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	6	-2.4712
chr12	41546789	41546807	protein_coding	Dock4	intron	ENSMUSG00000035954	NonProperStrand	9	chr17	35087895	35087940	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-9.0335
chr2	126472468	126472484	protein_coding	Gabpb1	exon	ENSMUSG00000027361	ProperStrand	54	chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	1	-12.7790
chr5	113517176	113517266	protein_coding	2900026A02Rik	utr3	ENSMUSG00000051339	ProperStrand	3	chr4	131865892	131865972	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.6896
chr19	35025022	35025122	protein_coding	Kif20b	exon	ENSMUSG00000024795	ProperStrand	45	chr16	90771716	90772825	protein_coding	Urb1	exon	ENSMUSG00000039929	ProperStrand	71	1	-13.5576
chr8	24049242	24049302	protein_coding	Myst3	exon	ENSMUSG00000031540	ProperStrand	111	chr1	88247800	88247835	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-3.9235
chr11	6519810	6519900	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	chr1	87983913	87983994	snoRNA	ENSMUSG00000077274_SNORA26	.	ENSMUSG00000077274	ProperStrand	361	13	-inf
chr3	82872939	82873620	protein_coding	Plrg1	exon	ENSMUSG00000027998	ProperStrand	16	chr17	24857750	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.7325
chr1	89596228	89596287	protein_coding	Inpp5d	exon	ENSMUSG00000026288	ProperStrand	75	chr6	89417387	89417404	protein_coding	Chchd6	exon	ENSMUSG00000030086	ProperStrand	20	1	-15.0883
chr11	62186942	62187033	protein_coding	Ncor1	exon	ENSMUSG00000018501	ProperStrand	132	chr5	130295432	130295512	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	12	-19.7029
chr18	67448673	67448690	Low_complexity	G-rich	Low_complexity	chr18G-rich67448622	ProperStrand	5	chr13	30338189	30338205	protein_coding	Mboat1	utr3	ENSMUSG00000038732	NonProperStrand	148	1	-16.6064
chr11	7067186	7069426	protein_coding	Adcy1	exon	ENSMUSG00000020431	ProperStrand	183	chr18	75161107	75161173	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	1	-6.8014
chr17	29178647	29178664	protein_coding	Srsf3	utr3	ENSMUSG00000071172	ProperStrand	23	chr16	23110849	23110867	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.4133
chr18	59441775	59441793	protein_coding	Chsy3	intron	ENSMUSG00000058152	ProperStrand	35	chr10	110918560	110918630	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-4.4630
chr11	44377920	44377972	protein_coding	Rnf145	utr3	ENSMUSG00000019189	ProperStrand	46	chr11	116938640	116938741	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	11	-inf
chr7	52378263	52378567	protein_coding	Rps11	exon	ENSMUSG00000003429	ProperStrand	49	chr10	23505152	23505204	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.5211
chr17	69581006	69581023	protein_coding	Epb4.1l3	intron	ENSMUSG00000024044	ProperStrand	28	chr2	129037086	129037105	protein_coding	Slc20a1	utr3	ENSMUSG00000027397	ProperStrand	81	1	-14.2546
chr2	179992757	179993111	protein_coding	Rps21	exon	ENSMUSG00000039001	ProperStrand	46	chr10	23505200	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	6	-10.9835
chr12	8740165	8740220	protein_coding	Pum2	exon	ENSMUSG00000020594	ProperStrand	39	chr7	116664809	116664899	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.3149
chr2	84530865	84531297	protein_coding	Zdhhc5	exon	ENSMUSG00000034075	NonProperStrand	144	chr2	26494708	26494759	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.6449
chr17	46536620	46536665	protein_coding	Zfp318	exon	ENSMUSG00000015597	ProperStrand	44	chr6	29074833	29074921	protein_coding	Rbm28	utr3	ENSMUSG00000029701	ProperStrand	24	1	-15.8241
chr7	110114018	110114034	protein_coding	Olfr576	exon	ENSMUSG00000073962	NonProperStrand	79	chr9	64022871	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-7.4766
chr11	120294405	120294422	protein_coding	Nploc4	exon	ENSMUSG00000039703	ProperStrand	44	chr16	23111382	23111439	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.7117
chr12	56404615	56451116	protein_coding	1110008L16Rik	intron	ENSMUSG00000021023	ProperStrand	20	chr3	123210853	123210933	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-6.8271
chr2	24825186	24827046	protein_coding	Wdr85	exon	ENSMUSG00000026975	ProperStrand	323	chr4	118950967	118951633	protein_coding	Ybx1	utr3	ENSMUSG00000028639	ProperStrand	171	1	-7.8469
chr1	55141469	55141509	protein_coding	Hspd1	exon	ENSMUSG00000025980	ProperStrand	140	chr14	76247711	76247755	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-4.6030
chr13	34220717	34220794	protein_coding	Tubb2b	intron	ENSMUSG00000045136	ProperStrand	49	chr17	35991441	35991457	protein_coding	Mdc1	exon	ENSMUSG00000061607	NonProperStrand	11	1	-17.2138
chr11	45723496	45723539	protein_coding	Clint1	utr3	ENSMUSG00000006169	ProperStrand	19	chr7	116664870	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-4.6802
chr17	25406145	25406372	protein_coding	Ube2i	exon	ENSMUSG00000015120	ProperStrand	20	chr16	23110539	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.4825
chr4	129272886	129272976	protein_coding-noncoding	Eif3i	utr3	ENSMUSG00000028798	NonProperStrand	1	chr4	129272494	129272574	protein_coding	Eif3i	intron	ENSMUSG00000028798	NonProperStrand	1	1	-inf
chr13	55105923	55105939	protein_coding	Unc5a	exon	ENSMUSG00000025876	NonProperStrand	96	chr9	120038467	120038552	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.2271
chr1	90598740	90598758	protein_coding	Arl4c	utr5	ENSMUSG00000049866	ProperStrand	25	chr5	130300458	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.1053
chr13	55698219	55698319	protein_coding	Tmed9	exon	ENSMUSG00000058569	ProperStrand	35	chr9	15119975	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-8.3326
chr18	73693110	73693190	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr5	108334196	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	9	-1.9546
chr10	19886574	19886591	protein_coding	Mtap7	intron	ENSMUSG00000019996	NonProperStrand	16	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-11.2747
chr4	33106166	33106277	protein_coding	Rragd	utr3	ENSMUSG00000028278	ProperStrand	14	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-14.4611
chr5	148113281	148113297	protein_coding	Cdx2	utr3	ENSMUSG00000029646	ProperStrand	276	chrX	71517822	71517872	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-3.6105
chr8	8639487	8660497	protein_coding	Efnb2	exon	ENSMUSG00000001300	NonProperStrand	14	chr4	43526332	43526362	protein_coding	Car9	utr3	ENSMUSG00000028463	NonProperStrand	35	1	-17.3969
chr9	31562549	31562639	SINE	B4A	B4	chr9B4A31562410	NonProperStrand	1	chr9	31562670	31562750	Simple_repeat	(CA)n	Simple_repeat	chr9(CA)n31562634	NonProperStrand	1	1	-inf
chr8	90848703	90848719	protein_coding	Adcy7	exon	ENSMUSG00000031659	ProperStrand	19	chrX	34622961	34623037	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-5.3629
chr11	107042403	107043090	protein_coding	Nol11	exon	ENSMUSG00000018433	ProperStrand	12	chr5	37493013	37493038	protein_coding	Jakmip1	exon	ENSMUSG00000063646	ProperStrand	21	1	-18.6634
chr7	29598268	29598348	protein_coding	Hnrnpl	utr5	ENSMUSG00000015165	ProperStrand	150	chr18	80408505	80408595	protein_coding	Gm16286	exon	ENSMUSG00000024571	ProperStrand	15	1	-14.3036
chr7	52382237	52382314	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	chr3	88497863	88497953	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-2.6714
chr11	62416574	62416596	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr9	78023109	78023190	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	2	-3.4640
chr7	74189892	74189909	protein_coding	Adamts17	intron	ENSMUSG00000058145	NonProperStrand	73	chr2	26768049	26768119	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	1	-8.0015
chr8	88364801	88364817	protein_coding	Itfg1	utr5	ENSMUSG00000031703	ProperStrand	38	chr9	120038552	120038608	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.8790
chr9	119311324	119311366	Low_complexity	C-rich	Low_complexity	chr9C-rich119311297	ProperStrand	13	chr16	23110892	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.3283
chr14	35380957	35380978	protein_coding	Ldb3	intron	ENSMUSG00000021798	ProperStrand	6	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-13.7348
chr19	8800359	8800449	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	chr1	187066801	187066883	snoRNA	ENSMUSG00000077571_Snora36b	.	ENSMUSG00000077571	ProperStrand	244	1	-1.2241
chr7	31034851	31035716	protein_coding	Wdr62	exon	ENSMUSG00000037020	ProperStrand	16	chr19	8963086	8963124	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.7073
chr4	43505808	43505898	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr9	110137651	110137684	protein_coding	Smarcc1	utr3	ENSMUSG00000032481	ProperStrand	108	1	-2.0629
chr7	24779190	24779213	SINE	ID_B1	B4	chr7ID_B124779183	NonProperStrand	54	chr11	11867679	11870432	protein_coding	Grb10	exon	ENSMUSG00000020176	NonProperStrand	159	1	-11.5700
chr18	10052131	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr10	110918557	110918647	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-0.7049
chr17	85176430	85189727	protein_coding	Lrpprc	exon	ENSMUSG00000024120	ProperStrand	98	chr4	117811168	117811476	protein_coding	Kdm4a	exon	ENSMUSG00000033326	ProperStrand	81	1	-11.7246
chr10	120891705	120891723	protein_coding	Rassf3	intron	ENSMUSG00000025795	ProperStrand	26	chr2	144087441	144087478	protein_coding	Snx5	intron	ENSMUSG00000027423	ProperStrand	64	1	-14.8685
chr2	60131578	60131597	protein_coding	Ly75	utr3	ENSMUSG00000026980	ProperStrand	59	chr16	23111449	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.2821
chr8	77643236	77644747	protein_coding	Mcm5	exon	ENSMUSG00000005410	ProperStrand	199	chr4	118950866	118950938	protein_coding	Ybx1	utr3	ENSMUSG00000028639	ProperStrand	171	1	-8.8104
chr18	78018599	78018699	protein_coding	Atp5a1	exon	ENSMUSG00000025428	ProperStrand	254	chr5	65952377	65952395	protein_coding	Ube2k	intron	ENSMUSG00000029203	ProperStrand	289	1	-7.2826
chr7	108842573	108842639	protein_coding	Clpb	intron	ENSMUSG00000001829	ProperStrand	44	chr1	39605603	39605693	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	2	-12.7279
chr2	136835289	136835342	protein_coding	2210009G21Rik	intron	ENSMUSG00000027281	ProperStrand	2	chr3	88603798	88603898	pseudogene	5830417I10Rik	.	ENSMUSG00000078684	ProperStrand	68	1	-19.6188
chr1	120580324	120580416	protein_coding	Tfcp2l1	utr3	ENSMUSG00000026380	ProperStrand	158	chr2	26768405	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	3	-9.1957
chr7	20296154	20296179	protein_coding	Tomm40	exon	ENSMUSG00000002984	ProperStrand	57	chr4	131908689	131908784	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-2.4821
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr1	162968211	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	5	-7.4074
chr5	31362876	31362921	protein_coding	Cad	exon	ENSMUSG00000013629	ProperStrand	260	chr5	4809087	4809107	protein_coding	Cdk14	intron	ENSMUSG00000028926	NonProperStrand	23	1	-12.3154
chr8	49636288	49636354	protein_coding	Odz3	intron	ENSMUSG00000031561	ProperStrand	56	chr7	118219574	118219653	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	14	-20.2809
chr2	162909221	162909311	protein_coding	Mybl2	utr3	ENSMUSG00000017861	ProperStrand	230	chr4	116862551	116862631	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	1	-6.1756
chr10	127005708	127005978	protein_coding	Lrp1	exon	ENSMUSG00000040249	ProperStrand	151	chr7	116664820	116664900	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.1280
chr11	120148960	120148976	protein_coding	Bahcc1	exon	ENSMUSG00000039741	NonProperStrand	268	chr7	118219708	118219740	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-1.5805
chr3	32414421	32414477	protein_coding	Zfp639	intron	ENSMUSG00000027667	ProperStrand	25	chr4	131908804	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.6029
chr4	131908356	131908463	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr10	6063958	6063976	protein_coding	Akap12	intron	ENSMUSG00000038587	ProperStrand	1008	1	-1.9922
chr6	47753805	47753862	protein_coding	Pdia4	exon	ENSMUSG00000025823	ProperStrand	41	chr10	73210533	73210549	protein_coding	Pcdh15	intron	ENSMUSG00000052613	NonProperStrand	15	1	-16.9936
chr11	70522527	70530935	protein_coding	Kif1c	exon	ENSMUSG00000020821	NonProperStrand	2	chr17	80599567	80599662	protein_coding	Srsf7	utr3	ENSMUSG00000024097	ProperStrand	31	1	-inf
chr18	10052130	10052153	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr6	124810680	124810696	protein_coding	Gpr162	exon	ENSMUSG00000038390	NonProperStrand	40	1	-9.6165
chr17	93469745	93469763	LTR	RLTR45-int	ERVK	chr17RLTR45-int93469692	ProperStrand	1	chr3	108357255	108357390	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-inf
chr10	62269635	62296311	protein_coding	Tet1	utr3	ENSMUSG00000047146	ProperStrand	286	chr16	23110482	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	8	-7.3761
chr9	65044377	65044435	snRNA	ENSMUSG00000075763_U5	.	ENSMUSG00000075763	ProperStrand	216	chr5	121655051	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	3	-4.5147
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr14	52829460	52829569	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-3.3638
chr4	126559848	126566767	protein_coding	Zmym4	exon	ENSMUSG00000042446	ProperStrand	94	chr7	4691730	4691754	protein_coding	Suv420h2	utr5	ENSMUSG00000059851	NonProperStrand	70	1	-12.1010
chr12	101546398	101546415	protein_coding	Ttc7b	intron	ENSMUSG00000033530	NonProperStrand	15	chr17	35087907	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-7.9703
chr14	99700861	99700939	protein_coding	Klf5	exon	ENSMUSG00000005148	ProperStrand	39	chr9	68727441	68727457	protein_coding	Rora	intron	ENSMUSG00000032238	NonProperStrand	30	1	-15.5881
chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr19	60850288	60850366	snoRNA	ENSMUSG00000065167_Snora19	.	ENSMUSG00000065167	ProperStrand	10	1	-11.5169
chr11	15212155	15212171	LINE	Lx	L1	chr11Lx15211662	ProperStrand	54	chr2	90235295	90235347	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	2	-7.7412
chr4	131825993	131826064	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	chr2	158205315	158205405	snoRNA	ENSMUSG00000064585_SNORA71	.	ENSMUSG00000064585	ProperStrand	418	1	-5.3774
chr4	151089850	151089866	protein_coding	Camta1	intron	ENSMUSG00000014592	NonProperStrand	34	chrX	71517872	71517954	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-7.6787
chr7	80547651	80547667	protein_coding	Rgma	intron	ENSMUSG00000070509	ProperStrand	46	chr7	30916562	30916629	protein_coding	Zfp382	exon	ENSMUSG00000074220	ProperStrand	2	1	-inf
chr14	20621770	20622367	protein_coding	Nid2	exon	ENSMUSG00000021806	ProperStrand	372	chr2	4974190	4974207	protein_coding	Optn	exon	ENSMUSG00000026672	ProperStrand	451	1	-5.6589
chr11	116535464	116535533	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr19	8799601	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	2	-1.1080
chr16	21351997	21352087	LTR	RLTR41	ERV1	chr16RLTR4121352020	NonProperStrand	1	chr5	15201234	15201324	lincRNA	Speer7-ps1	intron	ENSMUSG00000089871	NonProperStrand	1	1	-inf
chr5	145553009	145553076	protein_coding	Trrap	exon	ENSMUSG00000045482	ProperStrand	399	chr1	162966813	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	5	-12.1338
chr15	97906162	97906252	protein_coding	Senp1	intron	ENSMUSG00000033075	ProperStrand	24	chr7	116664794	116664874	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-4.2269
chr6	113489145	113489223	protein_coding	Fancd2	intron	ENSMUSG00000034023	ProperStrand	65	chr18	35716811	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-7.7618
chr15	76443244	76443260	protein_coding	Slc39a4	exon	ENSMUSG00000063354	ProperStrand	35	chr5	31190515	31190546	tRNA	tRNA109-TyrGTA	.	1741420	ProperStrand	64	1	-14.2680
chr9	121823892	121823908	protein_coding	Cyp8b1	exon	ENSMUSG00000050445	NonProperStrand	101	chr7	29136525	29136575	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.5377
chr14	19102890	19102913	protein_coding	Rpl15	exon	ENSMUSG00000012405	ProperStrand	145	chr5	108336360	108336450	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-5.5258
chr13	23104135	23104152	protein_coding	Vmn1r213	exon	ENSMUSG00000060024	NonProperStrand	2	chr5	121655016	121655097	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-inf
chr15	25333991	25334008	protein_coding	Basp1	intron	ENSMUSG00000045763	ProperStrand	10	chr15	79908957	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-9.0919
chr3	89354340	89354357	protein_coding	Kcnn3	intron	ENSMUSG00000000794	NonProperStrand	38	chr10	23505243	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.9123
chr1	63358057	63358075	protein_coding	Zdbf2	utr3	ENSMUSG00000027520	NonProperStrand	20	chrX	101156707	101156770	protein_coding	Rlim	utr3	ENSMUSG00000056537	ProperStrand	38	1	-16.4324
chr8	109892585	109892624	protein_coding	Nfat5	exon	ENSMUSG00000003847	ProperStrand	29	chr16	23110986	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0921
chr2	156301341	156301357	protein_coding-noncoding	Epb4.1l1	utr5	ENSMUSG00000027624	NonProperStrand	2	chr16	23111401	23111491	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-inf
chr5	114064662	114064752	protein_coding	Cmklr1	exon	ENSMUSG00000042190	ProperStrand	5	chr11	69481363	69481443	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-8.1843
chr6	70794802	70794820	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chr18	12172461	12172477	protein_coding	6030446N20Rik	intron	ENSMUSG00000049411	ProperStrand	235	1	-8.6879
chr4	43037646	43037730	protein_coding	Pigo	exon	ENSMUSG00000028454	ProperStrand	6	chr9	30235085	30235102	protein_coding	Snx19	exon	ENSMUSG00000031993	ProperStrand	353	4	-inf
chr7	116664840	116664940	protein_coding	Rpl27a	intron	ENSMUSG00000046364	ProperStrand	149	chr15	79913288	79913312	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	3	-5.5091
chr9	78023109	78023152	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr3	30546602	30546711	protein_coding	Lrrc34	utr5	ENSMUSG00000027702	ProperStrand	3	1	-12.2092
chr4	126698985	126704078	protein_coding	Sfpq	exon	ENSMUSG00000028820	ProperStrand	340	chr11	69483136	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-1.1985
chr17	30162510	30162531	protein_coding	Zfand3	intron	ENSMUSG00000044477	ProperStrand	20	chr9	120039622	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-5.4196
mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chrX	132749096	132749511	protein_coding	Bex1	utr5	ENSMUSG00000050071	ProperStrand	11	2	-14.8922
chr16	11144132	11144277	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr3	90539714	90539731	protein_coding	Pglyrp4	intron	ENSMUSG00000042250	NonProperStrand	2	2	-inf
chr9	98473914	98473930	protein_coding	Copb2	exon	ENSMUSG00000032458	NonProperStrand	4	chr15	82210572	82210588	protein_coding	Cyp2d22	utr5	ENSMUSG00000061740	NonProperStrand	18	1	-19.3636
chr14	26702492	26703456	protein_coding	Anxa11	exon	ENSMUSG00000021866	ProperStrand	30	chr2	26493382	26493482	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-5.0680
chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr18	63109676	63109692	protein_coding	Apcdd1	exon	ENSMUSG00000071847	NonProperStrand	254	1	-3.6780
chr4	126194586	126194676	protein_coding	Eif2c4	intron	ENSMUSG00000042500	NonProperStrand	2	chr1	88146423	88146513	protein_coding	Armc9	intron	ENSMUSG00000062590	NonProperStrand	5	1	-21.6030
chr7	17367099	17367132	protein_coding	Slc1a5	utr5	ENSMUSG00000001918	ProperStrand	19	chr19	8799036	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	4	-inf
chr11	32399246	32399336	protein_coding	Ubtd2	exon	ENSMUSG00000044949	ProperStrand	33	chr2	101793322	101795055	protein_coding	Ldlrad3	exon	ENSMUSG00000048058	ProperStrand	53	29	-18.9695
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr4	56910496	56910628	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-1.3384
chr3	156978201	156978217	protein_coding	Negr1	utr3	ENSMUSG00000040037	NonProperStrand	25	chr3	123210927	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.6093
chr8	63704833	63704849	protein_coding	Sh3rf1	exon	ENSMUSG00000031642	ProperStrand	50	chr4	116826700	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	2	-11.4892
chrX	12171984	12173338	protein_coding	Atp6ap2	exon	ENSMUSG00000031007	ProperStrand	29	chr7	116663637	116663717	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.8258
chr15	82957390	82957470	protein_coding	Poldip3	utr3	ENSMUSG00000041815	ProperStrand	57	chr10	62269589	62269618	protein_coding	Tet1	utr3	ENSMUSG00000047146	ProperStrand	286	1	-10.2865
chr1	36881663	36882127	protein_coding	Tmem131	exon	ENSMUSG00000026116	ProperStrand	129	chr16	23111694	23111784	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-0.8392
chr2	130560273	130560293	protein_coding	4930402H24Rik	intron	ENSMUSG00000027309	ProperStrand	16	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.7293
chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr5	38669015	38669031	protein_coding	Otop1	exon	ENSMUSG00000051596	NonProperStrand	8	1	-10.5674
chr2	162903526	162903587	protein_coding	Mybl2	exon	ENSMUSG00000017861	ProperStrand	230	chr10	80640619	80640812	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	2	-5.9859
chr19	15991652	15991676	protein_coding	Psat1	exon	ENSMUSG00000024640	ProperStrand	33	chr5	130300531	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.5813
chr6	113103000	113103023	protein_coding	Setd5	utr3	ENSMUSG00000034269	ProperStrand	162	chr11	69483195	69483237	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-0.9649
chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	chr4	132102565	132102608	protein_coding	Dnajc8	exon	ENSMUSG00000054405	ProperStrand	22	1	-10.1352
chr19	53319629	53319700	protein_coding	Add3	exon	ENSMUSG00000025026	ProperStrand	27	chr16	23110956	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-7.3040
chr16	3856858	3856875	protein_coding	Zfp174	utr3	ENSMUSG00000054939	NonProperStrand	166	chr1	162967514	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-3.1898
chr1	153204888	153204975	protein_coding	Ivns1abp	intron	ENSMUSG00000023150	ProperStrand	51	chr4	131865912	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.0255
chr17	35975150	35975193	protein_coding	Tubb5	utr5	ENSMUSG00000001525	ProperStrand	624	chr3	95980348	95980410	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	4	-8.7931
chr4	3762632	3762669	protein_coding	Rps20	utr5	ENSMUSG00000028234	ProperStrand	71	chr11	62416978	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-5.7125
chr4	118274743	118274765	protein_coding	Wdr65	intron	ENSMUSG00000028730	ProperStrand	5	chr6	86474832	86474886	protein_coding	Pcbp1	utr3	ENSMUSG00000051695	NonProperStrand	5	1	-19.0779
chr2	130101980	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	chr3	68889026	68889152	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	21	-2.0176
chr7	150717298	150717350	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	chr13	21292135	21292159	tRNA	tRNA65-LeuCAA	.	788946	ProperStrand	57	1	-5.6071
chr3	11580450	11580467	LINE	Lx3A	L1	chr3Lx3A11580299	ProperStrand	53	chr4	131865392	131865413	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-4.2368
chr9	21602970	21602986	protein_coding	Kank2	utr5	ENSMUSG00000032194	ProperStrand	196	chr18	35714234	35714260	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-1.4640
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr6	45843370	45843390	protein_coding	Cntnap2	intron	ENSMUSG00000039419	ProperStrand	21	1	-8.0023
chr6	108092499	108092577	protein_coding	Sumf1	intron	ENSMUSG00000030101	ProperStrand	2	chr11	97642996	97643086	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-9.6446
chr13	23830717	23830778	protein_coding	Hist1h1c	exon	ENSMUSG00000036181	ProperStrand	99	chr9	105817977	105817993	protein_coding	Col6a5	exon	ENSMUSG00000091345	ProperStrand	8	1	-16.4046
chr1	88252838	88252877	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	chr11	51551379	51551425	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	1	-1.5290
chr2	130109497	130109513	protein_coding	Idh3b	exon	ENSMUSG00000027406	ProperStrand	146	chr5	149126883	149126900	protein_coding	Mtus2	utr3	ENSMUSG00000029651	ProperStrand	114	1	-10.2397
chrX	22812688	22812778	protein_coding	Klhl13	exon	ENSMUSG00000036782	ProperStrand	7	chr3	88497853	88497933	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-11.8738
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr10	120709244	120712786	protein_coding	Tbc1d30	exon	ENSMUSG00000052302	ProperStrand	233	1	-5.9045
chr4	129011828	129012469	protein_coding	Rbbp4	exon	ENSMUSG00000057236	ProperStrand	22	chr1	9932548	9932611	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	5	-21.3517
chr8	14958615	14961163	protein_coding	Arhgef10	exon	ENSMUSG00000071176	ProperStrand	22	chr4	131865853	131865943	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.5019
chr12	101539897	101563760	protein_coding	Ttc7b	exon	ENSMUSG00000033530	ProperStrand	49	chr2	180396525	180396603	protein_coding	Dido1	exon	ENSMUSG00000038914	ProperStrand	81	1	-13.1223
chr1	38238302	38238318	protein_coding	Aff3	exon	ENSMUSG00000037138	NonProperStrand	11	chr17	13112529	13112549	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-7.9692
chr14	25673634	25673651	DNA	MER63D	AcHobo	chr14MER63D25673510	NonProperStrand	65	mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	1	-5.7464
chr7	136800631	136800649	SINE	RSINE1	B4	chr7RSINE1136800606	ProperStrand	216	chr8	13416895	13416912	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-3.9789
chr19	23332023	23332040	protein_coding	Smc5	exon	ENSMUSG00000024943	ProperStrand	146	chr9	120039623	120039674	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.8035
chr6	125136801	125137095	protein_coding	Ncapd2	exon	ENSMUSG00000038252	ProperStrand	170	chr17	66798457	66798473	protein_coding	1110012J17Rik	exon	ENSMUSG00000052105	NonProperStrand	38	1	-12.1461
chr2	172294191	172294268	protein_coding	2410001C21Rik	exon	ENSMUSG00000027502	ProperStrand	8	chr2	26493366	26493390	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-7.7535
chr11	55296195	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	chr17	13112450	13112586	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	13	-6.5058
chr10	75322238	75322285	protein_coding	Mif	exon	ENSMUSG00000033307	ProperStrand	146	chr7	29062768	29062786	protein_coding	Eid2b	utr5	ENSMUSG00000070705	ProperStrand	2	1	-inf
chr4	83109614	83110925	protein_coding	Psip1	exon	ENSMUSG00000028484	ProperStrand	104	chr1	162968243	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-5.7326
chr11	5344505	5344521	protein_coding	Znrf3	exon	ENSMUSG00000041961	ProperStrand	63	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-8.8288
chr5	103854542	103891155	protein_coding	Ptpn13	utr5	ENSMUSG00000034573	NonProperStrand	74	chr2	130101988	130102032	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-4.9495
chr2	178194847	178194864	protein_coding	Cdh26	exon	ENSMUSG00000039155	NonProperStrand	77	chr15	82980136	82980188	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	2	-10.7262
chr6	115757998	115758088	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr11	6520324	6520404	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	1	-0.7657
chr11	83519361	83519380	protein_coding	Gm11428	intron	ENSMUSG00000069792	ProperStrand	4	chr4	131865440	131865508	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	4	-inf
chr17	24302738	24302759	protein_coding-noncoding	Atp6v0c	utr3	ENSMUSG00000024121	ProperStrand	2	chr9	120038613	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-inf
chr4	124367051	124367067	protein_coding	Utp11l	intron	ENSMUSG00000028907	NonProperStrand	4	chr4	131908688	131908799	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-inf
chr5	130666857	130673853	protein_coding	Rabgef1	exon	ENSMUSG00000025340	ProperStrand	10	chr4	131866163	131866243	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-7.2014
chr15	35866911	35866943	protein_coding	Cox6c	exon	ENSMUSG00000014313	ProperStrand	10	chr19	30226003	30226071	protein_coding	Gldc	exon	ENSMUSG00000024827	ProperStrand	175	2	-19.6320
chr15	85809403	85809439	protein_coding	Celsr1	exon	ENSMUSG00000016028	ProperStrand	56	chr2	83693562	83693578	protein_coding	Fam171b	exon	ENSMUSG00000048388	NonProperStrand	175	1	-11.3041
chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	chr11	106362303	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-0.9952
chrX	149095715	149095774	protein_coding	Shroom2	exon	ENSMUSG00000045180	ProperStrand	9	chr19	8963027	8963044	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.8692
chr19	5455774	5455790	protein_coding	Ccdc85b	utr3	ENSMUSG00000042878	ProperStrand	14	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.3681
chr4	135606236	135607116	protein_coding	Rpl11	exon	ENSMUSG00000059291	ProperStrand	152	chr15	79913288	79913340	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-1.9758
chr15	77597977	77597993	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr1	93263065	93263081	protein_coding	Fam132b	exon	ENSMUSG00000047443	NonProperStrand	98	1	-7.8275
chr19	20850149	20850165	LINE	Lx5	L1	chr19Lx520850079	ProperStrand	2	chr16	23111384	23111503	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-8.0851
chr5	150025157	150025173	protein_coding	Uspl1	exon	ENSMUSG00000041264	NonProperStrand	33	chr2	25563004	25563028	protein_coding	Bmyc	utr3	ENSMUSG00000049086	ProperStrand	27	1	-16.1054
chr7	53493835	53493851	protein_coding	Ush1c	utr5	ENSMUSG00000030838	NonProperStrand	62	chr11	6428076	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.1331
chr4	118108910	118109121	protein_coding	Cdc20	exon	ENSMUSG00000006398	ProperStrand	43	chr16	23111736	23111816	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-4.3474
chr12	112779247	112779284	protein_coding	Eif5	intron	ENSMUSG00000021282	ProperStrand	125	chr12	88778629	88778729	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-5.0614
chr5	125821330	125821389	protein_coding	Scarb1	utr5	ENSMUSG00000037936	ProperStrand	18	chr16	23110917	23110956	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7867
chr3	101394607	101396377	protein_coding	Atp1a1	exon	ENSMUSG00000033161	ProperStrand	316	chr8	32260335	32260411	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	7	-13.3800
chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	chr9	78215860	78215877	protein_coding	Dppa5a	exon	ENSMUSG00000060461	ProperStrand	79	1	-8.8934
chr6	147040842	147050102	protein_coding	Klhdc5	exon	ENSMUSG00000040102	ProperStrand	13	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-7.6072
chr7	139335361	139335377	protein_coding	Cpxm2	exon	ENSMUSG00000030862	ProperStrand	20	chr11	6428109	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.2839
chr5	47106679	47106769	LINE	Lx3C	L1	chr5Lx3C47104955	NonProperStrand	1	chr5	47107013	47107093	LINE	Lx9	L1	chr5Lx947106960	NonProperStrand	1	1	-inf
chr7	89112347	89112363	protein_coding	Bnc1	utr3	ENSMUSG00000025105	NonProperStrand	11	chr4	143027927	143028559	protein_coding	Oog4	exon	ENSMUSG00000047799	NonProperStrand	99	1	-15.7557
chr11	97489600	97489617	protein_coding	E130012A19Rik	exon	ENSMUSG00000043439	NonProperStrand	110	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-7.7158
chr19	5492698	5492799	protein_coding	Cfl1	exon	ENSMUSG00000056201	ProperStrand	88	chr17	24857743	24857795	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.6833
chr9	50458990	50459031	protein_coding	Dlat	exon	ENSMUSG00000000168	ProperStrand	26	chr6	134029351	134029368	protein_coding	Etv6	intron	ENSMUSG00000030199	ProperStrand	46	1	-15.5481
chr19	41992996	41993019	protein_coding	Pgam1	utr3	ENSMUSG00000011752	ProperStrand	124	chr4	116827119	116827176	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-5.6099
chr12	101949044	101949144	protein_coding	Rps6ka5	intron	ENSMUSG00000021180	ProperStrand	11	chr19	18746826	18746884	protein_coding	2410127L17Rik	intron	ENSMUSG00000024726	ProperStrand	43	3	-inf
chr1	120738175	120738212	protein_coding	Gli2	intron	ENSMUSG00000048402	ProperStrand	148	chr3	123210911	123210979	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-2.6995
chr16	93832396	93832412	protein_coding	Morc3	utr5	ENSMUSG00000039456	NonProperStrand	33	chr3	123210917	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.0977
chr11	4666387	4667478	protein_coding	Nf2	utr3	ENSMUSG00000009073	ProperStrand	72	chr16	23111694	23111840	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-3.0123
chr2	32251767	32251784	protein_coding	Ptges2	utr5	ENSMUSG00000026820	ProperStrand	3	chr7	29136552	29136642	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-14.2802
chr8	59992790	59992880	protein_coding	Hmgb2	exon	ENSMUSG00000054717	ProperStrand	184	chr18	33954815	33954895	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	13	-inf
chr4	87876395	87876436	protein_coding	BC057079	exon	ENSMUSG00000038368	ProperStrand	52	chr7	117189944	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	4	-11.9786
chr13	45006563	45006643	protein_coding	Jarid2	exon	ENSMUSG00000038518	ProperStrand	372	chr9	64143783	64143873	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-4.2105
chr7	148634697	148634829	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	chr3	95980321	95980410	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	10	-3.9488
chr3	159502831	159502850	protein_coding	Wls	utr5	ENSMUSG00000028173	NonProperStrand	35	chr16	23110890	23110957	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.8578
chr7	35014360	35015168	protein_coding	Gpi1	exon	ENSMUSG00000036427	ProperStrand	288	chr17	35299561	35299641	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	2	-3.5452
chr4	131865411	131865460	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	chr12	110874223	110874290	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	1	-1.2152
chr1	13214713	13276058	protein_coding	Ncoa2	utr5	ENSMUSG00000005886	ProperStrand	26	chr7	4744797	4744831	protein_coding	Rpl28	utr5	ENSMUSG00000030432	ProperStrand	220	1	-12.4006
chr10	62301207	62301297	protein_coding	Tet1	exon	ENSMUSG00000047146	ProperStrand	286	chr5	73446046	73446078	protein_coding	Fryl	exon	ENSMUSG00000070733	ProperStrand	173	1	-8.0654
chr4	140107076	140107176	protein_coding	Arhgef10l	intron	ENSMUSG00000040964	ProperStrand	15	chr16	23110981	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.0842
chr17	39979970	39979995	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr17	56850731	56850815	protein_coding	Ranbp3	utr3	ENSMUSG00000002372	ProperStrand	34	1	-8.3610
chr2	131372110	131372131	protein_coding	Adra1d	exon	ENSMUSG00000027335	NonProperStrand	3	chr10	110918549	110918639	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-9.6547
chr2	32819270	32819306	protein_coding	Rpl12	exon	ENSMUSG00000038900	ProperStrand	167	chr10	90581034	90581134	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-2.9058
chr6	54472860	54475514	protein_coding	Scrn1	exon	ENSMUSG00000019124	ProperStrand	1	chr9	95524994	95525035	snoRNA	ENSMUSG00000065346_SNORA4	.	ENSMUSG00000065346	ProperStrand	142	1	-inf
chr2	125499562	125499579	protein_coding	Eid1	utr3	ENSMUSG00000091337	ProperStrand	60	chr8	125626931	125627005	snoRNA	ENSMUSG00000064450_Snord68	.	ENSMUSG00000064450	ProperStrand	181	1	-11.0984
chr2	90235303	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	96473677	96473693	protein_coding	Lrrc4c	intron	ENSMUSG00000050587	NonProperStrand	16	1	-7.0757
chr2	90235294	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr18	38746125	38746193	protein_coding	Spry4	utr3	ENSMUSG00000024427	ProperStrand	24	1	-6.2570
chr11	99885311	99885327	protein_coding	Krt33b	exon	ENSMUSG00000057723	NonProperStrand	352	chr10	23505559	23505626	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-4.1037
chr2	90235292	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr14	56185844	56186090	protein_coding	Dcaf11	exon	ENSMUSG00000022214	NonProperStrand	1	1	-inf
chr18	51289427	51289445	protein_coding	Prr16	intron	ENSMUSG00000073565	ProperStrand	16	chr13	51743568	51743661	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-9.5285
chr2	32818768	32818817	protein_coding-noncoding	Rpl12	utr5	ENSMUSG00000038900	ProperStrand	68	chr6	125056664	125056691	protein_coding	Chd4	exon	ENSMUSG00000063870	ProperStrand	303	1	-9.8165
chr2	152106018	152106108	protein_coding	Csnk2a1	utr3	ENSMUSG00000074698	ProperStrand	91	chr10	23505152	23505232	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-0.7221
chr1	190796390	190796416	protein_coding	Kctd3	exon	ENSMUSG00000026608	ProperStrand	28	chr16	23111372	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-6.5803
chr8	83505750	83505766	protein_coding	Usp38	exon	ENSMUSG00000038250	ProperStrand	26	chr2	26493392	26493483	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-5.3491
chr2	75738285	75742930	protein_coding	Agps	exon	ENSMUSG00000042410	ProperStrand	22	chr3	123210854	123210875	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.8504
chr10	75386048	75386089	protein_coding	Mmp11	utr3	ENSMUSG00000000901	ProperStrand	24	chr8	73419683	73419783	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.8583
chr16	36913256	36913360	protein_coding	Golgb1	exon	ENSMUSG00000034243	ProperStrand	92	chr4	131908235	131908289	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	5	-5.6995
chr8	105560721	105560738	LINE	L1VL4	L1	chr8L1VL4105560332	NonProperStrand	17	chr1	162968440	162968497	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-8.6119
chr9	21203653	21203903	protein_coding	Ilf3	exon	ENSMUSG00000032178	ProperStrand	164	chr2	26768049	26768119	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	3	-14.5764
chr15	61955565	61955583	lincRNA	Pvt1	intron	ENSMUSG00000072566	NonProperStrand	9	chr1	162968441	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-9.9348
chr7	24779190	24779213	SINE	ID_B1	B4	chr7ID_B124779183	NonProperStrand	54	chr13	55105923	55105939	protein_coding	Unc5a	exon	ENSMUSG00000025876	NonProperStrand	96	1	-12.5811
chr2	32818803	32818933	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	chr2	130101996	130102104	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	15	-9.1182
chr15	85889274	85889291	protein_coding	Gramd4	utr5	ENSMUSG00000035900	ProperStrand	39	chr11	97642952	97643008	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.2331
chrX	159297818	159301009	protein_coding	Syap1	exon	ENSMUSG00000031357	ProperStrand	11	chr8	73419659	73419749	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-6.4238
chr3	104599755	104599917	protein_coding	Mov10	exon	ENSMUSG00000002227	ProperStrand	96	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	3	-7.1338
chr5	74489215	74489295	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr13	90238633	90238723	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	1	-1.4661
chr11	44333023	44346417	protein_coding	Rnf145	utr5	ENSMUSG00000019189	NonProperStrand	20	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-8.8665
chr16	57391764	57391785	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr4	131865409	131865515	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	NonProperStrand	15	2	-20.3551
chr9	65550595	65550695	protein_coding	Zfp609	exon	ENSMUSG00000040524	ProperStrand	87	chr2	32818891	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-4.7507
chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	chrX	113862541	113862569	snoRNA	ENSMUSG00000088518_SNORA9	.	ENSMUSG00000088518	ProperStrand	280	1	-2.3772
chr4	43505651	43505721	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr12	30672001	30675603	protein_coding	Pxdn	exon	ENSMUSG00000020674	ProperStrand	33	1	-4.1792
chr3	156224612	156224628	lincRNA	4930570G19Rik	exon	ENSMUSG00000085084	ProperStrand	326	chr12	111932298	111932342	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	1	-4.9285
chr4	46502275	46502309	protein_coding	Nans	exon	ENSMUSG00000028334	ProperStrand	18	chr7	116663634	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-7.9214
chr14	72301755	72301771	SINE	B4	B4	chr14B472301692	NonProperStrand	99	chr4	134893921	134893956	protein_coding	Srrm1	exon	ENSMUSG00000028809	ProperStrand	142	1	-10.5781
chr13	117095083	117095101	protein_coding	Isl1	intron	ENSMUSG00000042258	NonProperStrand	17	chr4	131908804	131908867	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.3002
chr8	112115687	112115704	protein_coding-noncoding	Dhodh	utr3	ENSMUSG00000031730	ProperStrand	1	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-inf
chrX	71543005	71543085	protein_coding	Atp6ap1	exon	ENSMUSG00000019087	ProperStrand	11	chr1	89673695	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-6.5694
chr6	127690686	127690705	protein_coding	Prmt8	intron	ENSMUSG00000030350	NonProperStrand	3	chr12	70259711	70259743	protein_coding	Rps29	exon	ENSMUSG00000034892	ProperStrand	124	1	-18.3506
chr7	118214190	118214206	protein_coding	Eif4g2	utr3	ENSMUSG00000005610	NonProperStrand	30	chr15	82980143	82980189	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-8.5292
chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	chr15	79913288	79913346	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.1678
chr2	26493419	26493509	lincRNA	Snhg7	exon	ENSMUSG00000091299	NonProperStrand	10	chr14	51427238	51427328	misc_RNA	AC027184.1	.	ENSMUSG00000092837	NonProperStrand	20	1	-18.7347
chr8	113796824	113796914	protein_coding	Rfwd3	utr3	ENSMUSG00000033596	ProperStrand	71	chr18	35716707	35716787	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-3.4564
chr2	164378221	164378239	lincRNA	Gm14317	intron	ENSMUSG00000086179	ProperStrand	1	chr18	35101591	35101697	protein_coding	Hspa9	exon	ENSMUSG00000024359	ProperStrand	166	1	-inf
chr10	110931850	110932386	protein_coding	Nap1l1	exon	ENSMUSG00000058799	ProperStrand	185	chr4	141248251	141251333	protein_coding	Ddi2	exon	ENSMUSG00000078515	ProperStrand	79	1	-10.5014
chr11	69371525	69371625	protein_coding	Efnb3	intron	ENSMUSG00000003934	ProperStrand	2	chr18	35716789	35716834	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-9.2832
chr5	121655100	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	chr11	97631139	97631174	tRNA	tRNA1444-CysGCA	.	1246297	ProperStrand	91	1	-2.9882
chr13	60709542	60709559	protein_coding	Dapk1	intron	ENSMUSG00000021559	NonProperStrand	40	chr14	63761328	63761382	protein_coding	Ctsb	utr3	ENSMUSG00000021939	ProperStrand	48	1	-14.5831
chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	chr5	108336363	108336495	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	4	-6.7845
chr9	15119983	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	chr9	64143737	64143837	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-2.0653
chr7	148195605	148195621	protein_coding	Ifitm3	utr3	ENSMUSG00000025492	NonProperStrand	20	chrX	34622959	34623037	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-5.2611
chr17	29106000	29106100	protein_coding	Kctd20	utr3	ENSMUSG00000005936	NonProperStrand	3	chr10	127522379	127522416	snoRNA	ENSMUSG00000093245_AC131120.1	.	ENSMUSG00000093245	ProperStrand	77	2	-inf
chr2	24825186	24827046	protein_coding	Wdr85	exon	ENSMUSG00000026975	ProperStrand	323	chr7	129066677	129066727	protein_coding	Cog7	utr3	ENSMUSG00000034951	ProperStrand	29	1	-11.4099
mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr13	69085444	69085462	protein_coding	Adcy2	intron	ENSMUSG00000021536	NonProperStrand	16	1	-8.5577
chr17	39985669	39985759	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr4	56910510	56910590	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	10	-8.7323
chr13	97898306	97898338	protein_coding	Fam169a	utr3	ENSMUSG00000041817	ProperStrand	12	chr12	55797776	55797866	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	2	-17.4046
chr4	139482849	139482865	lincRNA	4933427I22Rik	exon	ENSMUSG00000085928	ProperStrand	62	chr11	62416599	62416627	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-5.1027
chr16	23111470	23111510	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr6	115757992	115758092	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-1.6235
chr2	136914353	136914443	protein_coding	Jag1	exon	ENSMUSG00000027276	ProperStrand	15	chr4	131908720	131908800	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.5353
chr11	69483262	69483342	protein_coding-noncoding	Eif4a1	utr3	ENSMUSG00000059796	ProperStrand	68	chr11	51551274	51551365	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	4	-19.5440
chr6	28824958	28830205	protein_coding	Snd1	exon	ENSMUSG00000001424	ProperStrand	210	chr2	26768392	26768433	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-3.2302
chr14	61614414	61614504	protein_coding	Tnfrsf19	intron	ENSMUSG00000060548	ProperStrand	34	chr7	117189898	117189978	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.3973
chr12	97022515	97022532	protein_coding	Flrt2	utr3	ENSMUSG00000047414	ProperStrand	1	chr10	23506278	23506348	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-inf
chr2	126254837	126254858	protein_coding	Atp8b4	intron	ENSMUSG00000060131	ProperStrand	5	chr9	15118322	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-8.4764
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr3	82707847	82707863	antisense	4930564K09Rik	.	ENSMUSG00000086273	ProperStrand	48	1	-4.8919
chr11	75125902	75126246	protein_coding	Rpa1	exon	ENSMUSG00000000751	ProperStrand	37	chr16	23111758	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.7135
chr12	85013790	85013806	protein_coding	Rbm25	exon	ENSMUSG00000010608	ProperStrand	42	chrX	132673816	132673833	protein_coding	Bex4	intron	ENSMUSG00000047844	NonProperStrand	70	3	-21.0779
chr2	170078895	170078985	LTR	MLT1A1	MaLR	chr2MLT1A1170078827	ProperStrand	1	chr2	170079055	170079135	SINE	B1_Mur1	Alu	chr2B1_Mur1170079044	NonProperStrand	1	1	-inf
chr6	119303469	119303569	protein_coding	Adipor2	utr3	ENSMUSG00000030168	ProperStrand	79	chr1	162965555	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.7847
chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	chr7	52715022	52715075	protein_coding	Ftl1	utr5	ENSMUSG00000050708	ProperStrand	807	1	-3.9777
chr14	25673634	25673651	DNA	MER63D	AcHobo	chr14MER63D25673510	NonProperStrand	65	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	4	-10.7282
chr5	122919480	122919566	protein_coding	Atp2a2	exon	ENSMUSG00000029467	ProperStrand	166	chr11	62416603	62416638	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-3.2495
chr2	164257636	164257652	protein_coding	Sdc4	intron	ENSMUSG00000017009	ProperStrand	177	chr7	29136525	29136562	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-0.8012
chr16	36085575	36085665	protein_coding	Ccdc58	intron	ENSMUSG00000075229	ProperStrand	18	chr18	35714195	35714275	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	4	-17.8504
chr9	108850603	108850626	protein_coding	Uqcrc1	exon	ENSMUSG00000025651	ProperStrand	43	chr5	140234053	140234102	protein_coding	Ints1	exon	ENSMUSG00000029547	ProperStrand	45	1	-14.5742
chr7	26404670	26404693	protein_coding	Atp5sl	utr5	ENSMUSG00000057229	ProperStrand	9	chr11	69483190	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-10.0340
chr7	38354919	38354935	protein_coding	Zfp536	exon	ENSMUSG00000043456	NonProperStrand	236	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-4.5279
chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	chr7	52382271	52382315	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-1.3669
chr1	9535642	9535704	protein_coding	Rrs1	exon	ENSMUSG00000061024	ProperStrand	18	chr2	26494708	26494800	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.4011
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr3	108228259	108228275	protein_coding	Sars	utr3	ENSMUSG00000068739	NonProperStrand	200	1	-6.3245
chr5	121655016	121655129	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	chr10	39978285	39978446	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	17	-2.6161
chr2	89368462	89368478	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	chr8	32260368	32260422	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	2	-3.5900
chr19	12840725	12840815	protein_coding	Zfp91	intron	ENSMUSG00000024695	ProperStrand	16	chr2	26768368	26768423	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-8.2494
chr2	63936037	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr1	162968441	162968470	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	2	-2.3740
chr12	13232265	13234144	protein_coding	Ddx1	exon	ENSMUSG00000037149	ProperStrand	47	chr16	23111457	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-3.0053
chr14	99697975	99698021	protein_coding	Klf5	utr5	ENSMUSG00000005148	ProperStrand	39	chr2	80394396	80394875	protein_coding	Nckap1	exon	ENSMUSG00000027002	ProperStrand	21	1	-16.2534
chr6	87863894	87863912	lincRNA	Gm16723	intron	ENSMUSG00000085703	ProperStrand	13	chr16	10963465	10966606	protein_coding	Litaf	exon	ENSMUSG00000022500	ProperStrand	25	1	-17.9911
chr6	122688854	122688944	protein_coding-noncoding	Slc2a3	utr3	ENSMUSG00000003153	ProperStrand	5	chr1	63225600	63225680	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-11.8128
chr4	82450342	82450419	protein_coding	Zdhhc21	utr3	ENSMUSG00000028403	ProperStrand	5	chr10	23505163	23505253	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-5.7809
chr9	44242542	44242570	protein_coding	Foxr1	utr3	ENSMUSG00000074397	ProperStrand	1	chr10	23505152	23505217	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-inf
chr5	125304082	125304146	protein_coding	Dnahc10	intron	ENSMUSG00000038011	ProperStrand	5	chr1	162965548	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-8.2678
chr5	65210079	65210095	protein_coding	Klf3	intron	ENSMUSG00000029178	ProperStrand	56	chr8	13416895	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-6.5909
chr18	10151049	10151139	snRNA	ENSMUSG00000065941_U1	.	ENSMUSG00000065941	ProperStrand	47	chr2	144087328	144087414	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-7.0307
chr1	137153759	137153859	protein_coding	Elf3	exon	ENSMUSG00000003051	ProperStrand	4	chr3	67161283	67161299	protein_coding	Rsrc1	utr3	ENSMUSG00000034544	NonProperStrand	71	1	-18.7270
chrX	84483697	84483730	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr17	35089181	35089226	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-1.0954
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr7	35030010	35030116	protein_coding	4931406P16Rik	exon	ENSMUSG00000066571	ProperStrand	75	5	-20.3597
chr15	79162440	79162458	SINE	B3A	B2	chr15B3A79162365	NonProperStrand	8	chr14	76247753	76247777	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-8.2107
chr19	44188368	44188473	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr7	4965781	4965803	protein_coding	Fiz1	utr5	ENSMUSG00000061374	ProperStrand	37	12	-19.1736
chr2	39239933	39239950	LINE	L1_Mur2	L1	chr2L1_Mur239239175	NonProperStrand	3	chr10	110918605	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-9.6547
chr10	77464176	77464767	protein_coding	Pfkl	exon	ENSMUSG00000020277	ProperStrand	179	chrX	34622906	34622943	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-1.3791
chr13	9833566	9833615	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr9	15117245	15118696	protein_coding	Taf1d	utr3	ENSMUSG00000031939	ProperStrand	363	1	-1.7444
chr2	129998643	129998701	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr14	51702551	51702586	tRNA	tRNA703-LeuTAG	.	43442	ProperStrand	6	1	-12.8664
chr11	116535915	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chrX	34639679	34640098	protein_coding	Upf3b	exon	ENSMUSG00000036572	ProperStrand	10	1	-9.5406
chr12	3573815	3573831	protein_coding	Dtnb	intron	ENSMUSG00000071454	ProperStrand	11	chr10	23506324	23506348	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-10.3945
chrX	70923995	70924061	protein_coding	Slc6a8	exon	ENSMUSG00000019558	ProperStrand	47	chr11	69481335	69481374	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.6486
chr11	21895251	21895267	protein_coding	Otx1	utr3	ENSMUSG00000005917	ProperStrand	5	chr16	23111448	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-5.8178
chr16	4055869	4056358	protein_coding	Trap1	exon	ENSMUSG00000005981	ProperStrand	25	chr11	68127956	68127977	protein_coding	Ntn1	intron	ENSMUSG00000020902	NonProperStrand	194	1	-12.7320
chr8	97772832	97772848	protein_coding	Cngb1	exon	ENSMUSG00000031789	ProperStrand	5	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-11.1940
chr15	82984818	82984870	protein_coding	Cyb5r3	utr3	ENSMUSG00000018042	ProperStrand	22	chr4	97740449	97740465	protein_coding	Nfia	intron	ENSMUSG00000028565	NonProperStrand	74	1	-14.9273
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	113919913	113919930	protein_coding	Wscd2	utr5	ENSMUSG00000085571	NonProperStrand	40	1	-5.2466
chr2	154375038	154375057	protein_coding	Necab3	intron	ENSMUSG00000027489	ProperStrand	7	chr11	62416992	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-10.4356
chr2	3456798	3456888	LINE	Lx4B	L1	chr2Lx4B3456761	NonProperStrand	1	chr2	3457016	3457096	LINE	Lx4B	L1	chr2Lx4B3456914	NonProperStrand	1	1	-inf
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	36034845	36035202	protein_coding	Atat1	exon	ENSMUSG00000024426	ProperStrand	26	2	-9.9405
chr1	168030385	168030475	protein_coding	Dusp27	exon	ENSMUSG00000026564	ProperStrand	47	chr18	35716793	35716873	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.5824
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr8	124079210	124079235	protein_coding	Fbxo31	exon	ENSMUSG00000031811	ProperStrand	9	1	-12.7253
chr2	164257636	164257652	protein_coding	Sdc4	intron	ENSMUSG00000017009	ProperStrand	177	chr17	35089181	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	2	-5.8400
chr4	134359523	134359539	protein_coding	Tmem57	utr3	ENSMUSG00000028826	ProperStrand	16	chr19	8963026	8963084	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.7073
chr18	50427495	50427575	LINE	L1Md_T	L1	chr18L1Md_T50421618	ProperStrand	2	chr1	12658152	12658242	lincRNA	Gm17644	exon	ENSMUSG00000066918	NonProperStrand	37	2	-inf
chr5	28400177	28401029	protein_coding	Insig1	exon	ENSMUSG00000045294	ProperStrand	35	chr4	131865853	131865977	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.6607
chr19	6070737	6070756	protein_coding	1110014N23Rik	exon	ENSMUSG00000024797	ProperStrand	49	chr1	155067273	155067333	protein_coding	Lamc1	utr3	ENSMUSG00000026478	ProperStrand	239	1	-10.9501
chr9	20885259	20885458	protein_coding	Raver1	exon	ENSMUSG00000010205	ProperStrand	69	chr19	8800377	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-3.2742
chr7	3297818	3297834	protein_coding	Myadm	utr3	ENSMUSG00000068566	NonProperStrand	13	chr9	15119632	15119720	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.5260
chr9	83678800	83681879	protein_coding	Elovl4	exon	ENSMUSG00000032262	ProperStrand	159	chr4	134479844	134479860	protein_coding	D4Wsu53e	exon	ENSMUSG00000037266	NonProperStrand	50	1	-11.7250
chr5	130300410	130300445	protein_coding	Cct6a	intron	ENSMUSG00000029447	ProperStrand	128	chr4	131865891	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.7504
chr2	90235293	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	51828028	51828044	protein_coding	Napsa	exon	ENSMUSG00000002204	ProperStrand	88	1	-3.7407
chr1	53010013	53010041	protein_coding	1700019D03Rik	utr5	ENSMUSG00000043629	ProperStrand	39	chr4	131865906	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-6.5889
chr5	111233934	111233997	protein_coding	Ulk1	intron	ENSMUSG00000029512	ProperStrand	92	chr8	12813003	12813025	protein_coding	Atp11a	intron	ENSMUSG00000031441	NonProperStrand	3	1	-19.4942
chr8	44381043	44381086	protein_coding	Zfp42	exon	ENSMUSG00000051176	ProperStrand	127	chr16	23111708	23111798	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-2.8506
chr7	150149863	150149953	DNA	MER45B	Tip100	chr7MER45B150149885	ProperStrand	1	chr7	150149645	150149725	SINE	B4A	B4	chr7B4A150149655	ProperStrand	1	1	-inf
chr12	32611713	32611744	protein_coding	Hbp1	utr3	ENSMUSG00000002996	ProperStrand	26	chr16	23110828	23110906	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.2392
chr7	52958453	52958469	protein_coding	Car11	exon	ENSMUSG00000003273	NonProperStrand	250	chr9	50816824	50816841	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	1	-8.9492
chr19	55401096	55401113	protein_coding	Vti1a	intron	ENSMUSG00000024983	NonProperStrand	62	chr19	8963027	8963083	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.2203
chr11	20118895	20125630	protein_coding	Rab1	utr3	ENSMUSG00000020149	ProperStrand	32	chr16	23110902	23110992	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-3.1962
chr1	8544720	8544738	protein_coding	Sntg1	intron	ENSMUSG00000025909	ProperStrand	8	chr16	23110962	23111005	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.2180
chr1	88252836	88252875	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	3	-1.6725
chr10	80413550	80413566	protein_coding	Gng7	utr3	ENSMUSG00000048240	ProperStrand	21	chr4	131866608	131866657	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	1	-11.2301
chr7	140908619	140909357	protein_coding	Bccip	exon	ENSMUSG00000030983	ProperStrand	19	chr11	97642975	97643055	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-11.1238
chr7	141022356	141022378	protein_coding	Fank1	intron	ENSMUSG00000053111	ProperStrand	3	chr16	23110896	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-9.5778
chr6	127418510	127418598	protein_coding	Parp11	intron	ENSMUSG00000037997	ProperStrand	5	chr11	97642952	97643016	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-7.3581
chr4	135565277	135566204	protein_coding	Tceb3	exon	ENSMUSG00000028668	ProperStrand	17	chr2	145077957	145209255	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-10.2750
chr17	39985582	39985672	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr11	106362560	106362640	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	3	-2.8239
chr16	15966725	15966783	protein_coding	2310008H04Rik	exon	ENSMUSG00000041974	ProperStrand	30	chr14	119693352	119693368	protein_coding	Hs6st3	intron	ENSMUSG00000053465	NonProperStrand	134	1	-13.1023
chr19	56003755	56003771	protein_coding	Tcf7l2	intron	ENSMUSG00000024985	ProperStrand	103	chr17	31784987	31785005	protein_coding	U2af1	exon	ENSMUSG00000061613	ProperStrand	17	1	-14.7950
chr15	38962239	38962291	protein_coding	Dcaf13	intron	ENSMUSG00000022300	ProperStrand	8	chr11	69481384	69481432	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-11.7087
chr9	92476051	92495653	protein_coding	Plod2	exon	ENSMUSG00000032374	ProperStrand	52	chr16	23110893	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-5.2593
chr19	30225916	30225995	protein_coding	Gldc	exon	ENSMUSG00000024827	ProperStrand	175	chr14	52829459	52829538	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-6.0805
chr2	118354610	118354658	protein_coding	Bmf	utr3	ENSMUSG00000040093	ProperStrand	53	chr1	162965999	162966028	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-6.4759
chr6	122271956	122272065	protein_coding	Phc1	exon	ENSMUSG00000040669	ProperStrand	158	chr16	23109067	23109089	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-5.3758
chr4	11455840	11457977	protein_coding	1110037F02Rik	exon	ENSMUSG00000040720	ProperStrand	32	chr7	116664857	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.6812
chr19	34999238	34999254	protein_coding	Kif20b	exon	ENSMUSG00000024795	NonProperStrand	28	chr4	98095645	98095688	protein_coding	Inadl	exon	ENSMUSG00000061859	ProperStrand	21	1	-16.8452
chr8	113339849	113339939	protein_coding	Sf3b3	exon	ENSMUSG00000033732	ProperStrand	181	chr5	145532297	145532377	protein_coding	Trrap	intron	ENSMUSG00000045482	ProperStrand	399	1	-7.3155
chr13	56276640	56276657	protein_coding	Tifab	utr3	ENSMUSG00000049625	NonProperStrand	4	chr7	107125681	107125769	protein_coding	Rnf169	intron	ENSMUSG00000058761	ProperStrand	31	1	-18.8692
chr11	6161630	6161684	protein_coding	Ddx56	exon	ENSMUSG00000004393	ProperStrand	21	chr10	126611898	126612081	protein_coding	Slc26a10	utr3	ENSMUSG00000040441	ProperStrand	5	1	-19.3637
chr1	182509374	182509406	protein_coding	Parp1	exon	ENSMUSG00000026496	ProperStrand	227	chr2	130101269	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-4.0162
chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	chr11	58768528	58768597	protein_coding	Hist3h2a	exon	ENSMUSG00000078851	ProperStrand	67	1	-8.3721
chr1	88426335	88426595	protein_coding	Ptma	utr3	ENSMUSG00000026238	ProperStrand	385	chr9	96855056	96855074	protein_coding	Spsb4	intron	ENSMUSG00000046997	NonProperStrand	2	1	-17.2715
chr14	51427302	51427392	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr4	46161050	46161124	protein_coding	Ncbp1	intron	ENSMUSG00000028330	ProperStrand	21	1	-9.3239
chr2	151383183	151385267	protein_coding	Fkbp1a	exon	ENSMUSG00000032966	ProperStrand	36	chr8	15028664	15028698	protein_coding	Kbtbd11	exon	ENSMUSG00000055675	ProperStrand	10	1	-17.9441
chr7	52958453	52958469	protein_coding	Car11	exon	ENSMUSG00000003273	NonProperStrand	250	chr2	26494773	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-0.8962
chr1	89091564	89092064	protein_coding	Chrnd	exon	ENSMUSG00000026251	ProperStrand	32	chr16	23110937	23110957	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.9664
chr6	79193893	79193909	LTR	ORR1C2-int	MaLR	chr6ORR1C2-int79193055	ProperStrand	8	chr6	71832629	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-9.7064
chr4	98248273	98248290	protein_coding	Inadl	intron	ENSMUSG00000061859	NonProperStrand	15	chr8	129468750	129468800	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-7.1564
chr6	83059830	83059847	protein_coding	Mrpl53	utr3	ENSMUSG00000030037	ProperStrand	13	chr18	35716772	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-8.3412
chr18	67470330	67470409	protein_coding	Impa2	exon	ENSMUSG00000024525	ProperStrand	31	chr1	162967512	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	5	-18.8168
chr7	28290306	28290325	protein_coding	Prx	intron	ENSMUSG00000053198	ProperStrand	21	chr2	144087398	144087463	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-8.6534
chr4	149026816	149026832	protein_coding	Pik3cd	exon	ENSMUSG00000039936	ProperStrand	151	chr6	120949088	120949121	protein_coding	Mical3	intron	ENSMUSG00000051586	ProperStrand	104	1	-10.3563
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	152198645	152198661	lincRNA	1700028E10Rik	exon	ENSMUSG00000087548	ProperStrand	53	1	-4.7006
chr11	68886975	68887036	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	chr7	52381722	52381755	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	5	-2.0705
chr16	13685313	13685403	protein_coding	Bfar	exon	ENSMUSG00000022684	ProperStrand	20	chr14	65372776	65372855	snoRNA	ENSMUSG00000064442_SNORA36	.	ENSMUSG00000064442	ProperStrand	296	1	-12.3413
chr4	122968627	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	chr14	76372346	76372426	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	1	-2.2604
mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr11	4820972	4820990	protein_coding	Thoc5	intron	ENSMUSG00000034274	ProperStrand	325	2	-4.7541
chr2	167836656	167836680	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	chr1	34258079	34258095	protein_coding	Dst	utr5	ENSMUSG00000026131	ProperStrand	461	1	-8.0551
chr3	95463864	95463880	protein_coding	Mcl1	exon	ENSMUSG00000038612	ProperStrand	75	chr7	52381973	52382031	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-6.2706
chr8	106942360	106942376	protein_coding	Dync1li2	utr3	ENSMUSG00000035770	ProperStrand	75	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.4339
chr8	113681564	113681636	protein_coding	Glg1	utr3	ENSMUSG00000003316	ProperStrand	83	chr7	74819125	74819142	protein_coding	Ttc23	intron	ENSMUSG00000030555	ProperStrand	11	1	-16.1115
chr7	148124215	148124305	SINE	B1_Mm	Alu	chr7B1_Mm148124147	ProperStrand	1	chr7	148124029	148124109	SINE	B3	B2	chr7B3148123922	ProperStrand	1	1	-inf
chr19	6015649	6015666	protein_coding	Capn1	intron	ENSMUSG00000024942	ProperStrand	22	chr15	101959147	101960716	protein_coding	Spryd3	exon	ENSMUSG00000036966	ProperStrand	14	1	-18.5274
chr8	87223595	87223612	protein_coding	Trmt1	exon	ENSMUSG00000001909	NonProperStrand	60	chr18	75161110	75161173	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	2	-14.3078
chr7	52382098	52382188	protein_coding-noncoding	Rpl13a	utr3	ENSMUSG00000074129	ProperStrand	106	chr12	111932401	111932478	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	1	-7.1258
chr5	109124122	109132306	protein_coding	Fgfrl1	exon	ENSMUSG00000008090	ProperStrand	111	chr19	8799830	8799864	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-3.7786
chr4	98597774	98597890	protein_coding	Usp1	exon	ENSMUSG00000028560	ProperStrand	11	chr7	16534823	16534839	protein_coding	Ehd2	utr3	ENSMUSG00000074364	NonProperStrand	197	3	-inf
chr4	140759181	140759281	protein_coding	Fbxo42	utr3	ENSMUSG00000028920	ProperStrand	91	chr4	131908689	131908713	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.7146
chr14	63775529	63777886	protein_coding	Fdft1	exon	ENSMUSG00000021273	ProperStrand	37	chr5	74489596	74489676	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	10	-20.1752
chr13	8766290	8766307	protein_coding	Adarb2	utr3	ENSMUSG00000052551	ProperStrand	292	chr6	125136477	125136577	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	1	-3.4108
chr5	135693746	135693812	protein_coding	Baz1b	exon	ENSMUSG00000002748	ProperStrand	83	chr1	89673604	89673694	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-2.6860
chr9	99287280	99287296	protein_coding	Mras	utr3	ENSMUSG00000032470	ProperStrand	10	chr19	8963080	8963170	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.6521
chr11	119213484	119213501	protein_coding	Sgsh	intron	ENSMUSG00000005043	NonProperStrand	15	chr7	52381737	52381784	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	2	-16.4206
chr5	123973283	123973336	protein_coding	Diablo	exon	ENSMUSG00000029433	ProperStrand	3	chr16	23110981	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-9.5778
chr7	133641148	133641674	protein_coding	Atxn2l	exon	ENSMUSG00000032637	ProperStrand	219	chr4	131866155	131866235	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-1.4788
chr2	86138158	86138174	protein_coding	Olfr1052	exon	ENSMUSG00000047149	NonProperStrand	119	chr1	102076761	102076790	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	1	-8.0658
chr12	92605341	92605392	protein_coding	4930534B04Rik	intron	ENSMUSG00000061533	ProperStrand	14	chr1	24619381	24619414	protein_coding	Gm10222	exon	ENSMUSG00000067736	ProperStrand	42	2	-inf
chr2	144087316	144087364	protein_coding	Snx5	intron	ENSMUSG00000027423	ProperStrand	64	chr2	144087345	144087450	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	6	-20.4528
chr9	45550592	45550609	protein_coding	Dscaml1	intron	ENSMUSG00000032087	ProperStrand	23	chr4	121870881	122132506	pseudogene	Gm12896	.	ENSMUSG00000083558	NonProperStrand	19	1	-17.4536
chr14	15572355	15572371	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr6	88435849	88435865	protein_coding	Ruvbl1	exon	ENSMUSG00000030079	NonProperStrand	54	1	-11.4958
mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr2	165904622	165904638	protein_coding	Sulf2	exon	ENSMUSG00000006800	ProperStrand	171	1	-3.8910
chr4	43505818	43505898	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr1	36562045	36562135	protein_coding	Cnnm4	intron	ENSMUSG00000037408	ProperStrand	12	1	-6.1793
chr1	40053934	40053951	protein_coding	Map4k4	exon	ENSMUSG00000026074	ProperStrand	348	chr10	28544627	28544650	protein_coding	Themis	intron	ENSMUSG00000049109	NonProperStrand	2	1	-17.2883
chr11	68801979	68802069	protein_coding	Pfas	exon	ENSMUSG00000020899	ProperStrand	53	chr18	33954828	33954908	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-3.7353
chr3	135350608	135350624	protein_coding	Nfkb1	intron	ENSMUSG00000028163	NonProperStrand	16	chr1	162965531	162965575	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.8202
chr4	41250206	41250223	protein_coding	Dcaf12	intron	ENSMUSG00000028436	ProperStrand	33	chr11	62416599	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-6.3427
chr7	134461586	134461654	protein_coding	Itgal	intron	ENSMUSG00000030830	ProperStrand	38	chr5	75473198	75473215	protein_coding	Gsx2	utr3	ENSMUSG00000035946	ProperStrand	307	1	-10.9631
chr11	87863416	87863473	protein_coding	Srsf1	utr3	ENSMUSG00000018379	ProperStrand	49	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.6485
chr15	82725592	82725609	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	chr8	98269990	98270096	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-1.3187
chr2	35039358	35039417	protein_coding-noncoding	Rab14	utr3	ENSMUSG00000026878	ProperStrand	2	chr4	114741487	114741504	protein_coding	Tal1	utr3	ENSMUSG00000028717	NonProperStrand	69	1	-inf
chr2	25105896	25107254	protein_coding	Ndor1	exon	ENSMUSG00000006471	NonProperStrand	84	chr8	129468749	129468798	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-3.7794
chr17	67712818	67712835	LTR	ORR1E	MaLR	chr17ORR1E67712788	ProperStrand	39	chr4	116828389	116828452	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-9.2480
chr11	4820972	4820990	protein_coding	Thoc5	intron	ENSMUSG00000034274	ProperStrand	325	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-1.4666
chr2	19316205	19316221	protein_coding	Msrb2	utr3	ENSMUSG00000023094	NonProperStrand	2	chr9	120038543	120038676	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-10.2959
chr6	51413098	51413149	protein_coding	Hnrnpa2b1	utr3	ENSMUSG00000004980	NonProperStrand	4	chr16	23111415	23111505	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	NonProperStrand	38	2	-20.4279
chr19	18766073	18768177	protein_coding	2410127L17Rik	exon	ENSMUSG00000024726	ProperStrand	43	chr10	80641734	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	1	-8.2150
chr2	117996397	117996487	LTR	MTD	MaLR	chr2MTD117996187	ProperStrand	8	chr11	69483168	69483249	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	7	-19.4863
chr10	127523447	127525382	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-3.6462
chr4	116827118	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	chr10	90581049	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	16	-17.1251
chr17	4082192	4082242	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr11	75281743	75281760	protein_coding	Tlcd2	exon	ENSMUSG00000038217	ProperStrand	23	1	-11.9061
chr1	194571769	194571849	snRNA	ENSMUSG00000064881_U5	.	ENSMUSG00000064881	ProperStrand	187	chr11	69481376	69481466	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-1.3407
chr11	70481437	70481527	protein_coding	Spag7	intron	ENSMUSG00000018287	ProperStrand	6	chr10	110918549	110918629	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-8.0545
chr1	191058375	191058392	protein_coding	Kcnk2	intron	ENSMUSG00000037624	ProperStrand	56	chr19	8800085	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	3	-17.1871
chr13	97421932	97422104	protein_coding	Hmgcr	exon	ENSMUSG00000021670	ProperStrand	56	chr9	120038024	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-4.8388
chr17	57161636	57161736	protein_coding	Khsrp	utr3	ENSMUSG00000007670	ProperStrand	353	chr2	158185530	158185600	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-3.1093
chr8	107893104	107893121	protein_coding	Slc9a5	utr3	ENSMUSG00000014786	NonProperStrand	25	chr4	131865855	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-5.6335
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr7	52680404	52680547	protein_coding	Ruvbl2	exon	ENSMUSG00000003868	ProperStrand	41	1	-8.7382
chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	chr17	24665421	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-3.4124
chr17	35089182	35089201	processed_transcript	1110038B12Rik	.	ENSMUSG00000092203	ProperStrand	126	chr16	23111703	23111777	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-0.8665
chr2	32157256	32157744	protein_coding	Golga2	exon	ENSMUSG00000002546	ProperStrand	10	chr11	68886934	68887014	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-7.7108
chr4	56880870	56880923	protein_coding	D730040F13Rik	utr3	ENSMUSG00000055296	ProperStrand	48	chr2	157387442	157387497	protein_coding	Nnat	utr3	ENSMUSG00000067786	ProperStrand	1	1	-inf
chr8	23286336	23287439	protein_coding	Ckap2	exon	ENSMUSG00000037725	ProperStrand	69	chr19	8963027	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-3.6917
chr11	8082233	8082313	LINE	Lx	L1	chr11Lx8080423	ProperStrand	1	chr15	21439646	21439736	protein_coding	Cdh12	intron	ENSMUSG00000040452	ProperStrand	2	1	-inf
chr4	116197298	116197339	protein_coding	Ipp	intron	ENSMUSG00000028696	ProperStrand	17	chr1	162968473	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	3	-20.3741
chr18	74952993	74954792	protein_coding	Acaa2	exon	ENSMUSG00000036880	ProperStrand	4	chr18	33954815	33954897	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-9.0265
chr6	134029351	134029368	protein_coding	Etv6	intron	ENSMUSG00000030199	ProperStrand	46	chr7	114353940	114353995	protein_coding	Rbmxl2	exon	ENSMUSG00000073894	ProperStrand	23	1	-15.7795
chr8	73511394	73511484	LINE	L1Md_Gf	L1	chr8L1Md_Gf73511378	ProperStrand	1	chr2	70343082	70343172	antisense	Gm16292	.	ENSMUSG00000086515	NonProperStrand	1	1	-inf
chr15	99454707	99454741	protein_coding	Racgap1	exon	ENSMUSG00000023015	ProperStrand	47	chr10	23505152	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-2.9598
chr11	68922008	68922593	protein_coding	Per1	exon	ENSMUSG00000020893	ProperStrand	46	chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	1	-11.9708
chr4	131866137	131866304	lincRNA	Snhg12	exon	ENSMUSG00000086290	ProperStrand	178	mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	2	-6.4299
chr2	158451026	158451043	protein_coding	Actr5	exon	ENSMUSG00000037761	NonProperStrand	94	chr17	24857749	24857839	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.5840
chr6	113374762	113374778	protein_coding	Cidec	utr3	ENSMUSG00000030278	NonProperStrand	9	chr8	96704174	96704202	protein_coding	Mt1	utr3	ENSMUSG00000031765	ProperStrand	92	1	-16.3263
chr11	79827424	79827476	protein_coding	Suz12	intron	ENSMUSG00000017548	ProperStrand	53	chrX	149828130	149828146	protein_coding	Klf8	utr3	ENSMUSG00000041649	NonProperStrand	107	1	-12.4014
chr11	80207790	80207822	protein_coding	Zfp207	exon	ENSMUSG00000017421	ProperStrand	21	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-7.2962
chr8	109266309	109266346	protein_coding	Tmco7	exon	ENSMUSG00000041949	ProperStrand	30	chr17	39985576	39985665	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	2	-11.7609
chr9	107947336	107947367	protein_coding	Ip6k1	intron	ENSMUSG00000032594	ProperStrand	61	chr11	97642952	97643074	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.4435
chr4	22414139	22414155	protein_coding	Pou3f2	exon	ENSMUSG00000052621	NonProperStrand	90	chr9	120038466	120038546	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-4.1449
chr5	66728244	66728297	protein_coding	Apbb2	intron	ENSMUSG00000029207	ProperStrand	25	chr19	31005116	31005133	protein_coding	Prkg1	intron	ENSMUSG00000052920	ProperStrand	32	1	-16.3642
chr7	52309977	52309993	protein_coding	Prrg2	exon	ENSMUSG00000007837	NonProperStrand	281	chr11	62416601	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-2.3320
chr16	31303573	31311155	protein_coding	Apod	exon	ENSMUSG00000022548	ProperStrand	10	chr3	123210854	123210932	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-9.0015
chr14	56159295	56159314	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	chr2	26768049	26768107	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	1	-6.0468
chr7	19611302	19611318	protein_coding	Sympk	intron	ENSMUSG00000023118	NonProperStrand	15	chr2	180447996	180449416	protein_coding	2310003C23Rik	exon	ENSMUSG00000027573	ProperStrand	25	1	-17.7812
chr6	125032061	125032077	protein_coding	Lpar5	exon	ENSMUSG00000067714	ProperStrand	6	chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	1	-16.1386
chr7	29603926	29605175	protein_coding	Hnrnpl	exon	ENSMUSG00000015165	ProperStrand	150	chr2	26493366	26493465	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-2.1286
chr15	85705596	85705634	protein_coding	Gtse1	exon	ENSMUSG00000022385	ProperStrand	74	chr18	82773672	82773688	protein_coding	Zfp236	exon	ENSMUSG00000041258	NonProperStrand	117	1	-11.5507
chr2	121587713	121587730	protein_coding	Frmd5	intron	ENSMUSG00000027238	ProperStrand	35	chr4	131865380	131865442	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-5.0359
chr1	92508963	92509024	protein_coding	Cops8	utr3	ENSMUSG00000034432	ProperStrand	9	chr4	131908689	131908771	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-11.3034
chr7	82048422	82048439	LINE	Lx4B	L1	chr7Lx4B82047669	NonProperStrand	1	chr17	35152764	35152790	protein_coding	Vars	exon	ENSMUSG00000007029	ProperStrand	121	1	-inf
chr16	3749823	3749840	protein_coding	Zfp263	exon	ENSMUSG00000022529	ProperStrand	17	chr5	121655031	121655129	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-6.2021
chr9	42932836	42932852	protein_coding	Pou2f3	utr3	ENSMUSG00000032015	NonProperStrand	10	chr8	124409899	124410273	protein_coding	Slc7a5	exon	ENSMUSG00000040010	ProperStrand	166	2	-23.1260
chr6	57712505	57712521	protein_coding	Vopp1	exon	ENSMUSG00000037788	NonProperStrand	21	chr9	120039624	120039664	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-5.3228
chr13	14703716	14703763	protein_coding	Mrpl32	exon	ENSMUSG00000015672	ProperStrand	7	chr19	8800361	8800451	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	3	-18.3334
chr11	120211365	120211383	protein_coding	0610009L18Rik	intron	ENSMUSG00000043644	NonProperStrand	1	chr7	29136525	29136600	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-inf
chr5	150438813	150438846	protein_coding	Hsph1	utr5	ENSMUSG00000029657	ProperStrand	16	chr4	131908688	131908722	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-5.8984
chr2	90235314	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	12902322	12902670	protein_coding	Ltv1	exon	ENSMUSG00000019814	ProperStrand	76	1	-4.0146
chr9	110846708	110848329	protein_coding	Tdgf1	exon	ENSMUSG00000032494	ProperStrand	218	chr11	69482449	69482497	snoRNA	ENSMUSG00000089542_snoU6-77	.	ENSMUSG00000089542	ProperStrand	138	4	-inf
chr19	6046764	6046782	protein_coding	Syvn1	utr5	ENSMUSG00000024807	NonProperStrand	2	chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	1	-19.2741
chr5	76666176	76669900	protein_coding	Clock	exon	ENSMUSG00000029238	NonProperStrand	64	chr4	131908689	131908722	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.1372
chr7	91824633	91824723	protein_coding	Zfand6	intron	ENSMUSG00000030629	ProperStrand	11	chr10	110923478	110923558	protein_coding	Nap1l1	intron	ENSMUSG00000058799	ProperStrand	185	1	-14.5135
chr6	80029402	80029420	protein_coding	Lrrtm4	intron	ENSMUSG00000052581	ProperStrand	17	chr7	117189932	117190008	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-5.7589
chr2	127630262	127630328	protein_coding	Bub1	exon	ENSMUSG00000027379	ProperStrand	26	chr16	23111396	23111486	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.5788
chr9	120038470	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	chr2	166890498	166890578	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	6	-0.8466
chr19	8799829	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	NonProperStrand	3	chr15	34370572	34370662	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	NonProperStrand	21	1	-20.8842
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	79882609	80041501	protein_coding	Arhgap10	intron	ENSMUSG00000037148	ProperStrand	58	2	-7.5309
chr19	8963219	8963241	miRNA	Mir5136	.	ENSMUSG00000093314	ProperStrand	45	chr11	78313939	78313956	protein_coding	Vtn	exon	ENSMUSG00000017344	ProperStrand	188	1	-11.6022
chr15	103129149	103129224	protein_coding	Copz1	utr3	ENSMUSG00000060992	ProperStrand	45	chr17	35299521	35299611	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-5.3357
chr10	77454137	77454184	protein_coding	Pfkl	exon	ENSMUSG00000020277	ProperStrand	179	chr16	23109049	23109090	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	2	-8.4348
chr14	51427119	51427194	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr11	19868530	19868592	protein_coding	Spred2	intron	ENSMUSG00000045671	ProperStrand	106	4	-18.1678
chr8	67199178	67199217	protein_coding	Sc4mol	exon	ENSMUSG00000031604	ProperStrand	24	chr11	69483195	69483227	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.1173
chr10	117251741	117251804	protein_coding	Rap1b	utr3	ENSMUSG00000052681	ProperStrand	15	chr11	104112332	104112361	snoRNA	ENSMUSG00000065379_SNORA25	.	ENSMUSG00000065379	ProperStrand	2	2	-inf
chr2	160580655	160581554	protein_coding	Plcg1	exon	ENSMUSG00000016933	ProperStrand	65	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-2.0526
chr1	107888141	107888411	protein_coding	Zcchc2	exon	ENSMUSG00000038866	ProperStrand	15	chr4	131865856	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	5	-18.0354
chr6	108763383	108763402	protein_coding	Arl8b	intron	ENSMUSG00000030105	ProperStrand	28	chr5	108334195	108334331	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	NonProperStrand	17	2	-20.9088
chr4	41160813	41160874	protein_coding	Ubap2	utr5	ENSMUSG00000028433	ProperStrand	292	chr9	120039578	120039678	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	8	-10.8306
chr16	44089060	44089133	protein_coding	Atp6v1a	exon	ENSMUSG00000052459	ProperStrand	79	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-4.6801
chr15	81733916	81743555	protein_coding	Aco2	exon	ENSMUSG00000022477	ProperStrand	237	chr18	35716846	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	5	-3.5580
chr12	72233071	72233535	protein_coding	Timm9	utr5	ENSMUSG00000021079	ProperStrand	3	chr16	23110829	23110873	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr9	110846717	110848387	protein_coding	Tdgf1	utr5	ENSMUSG00000032494	ProperStrand	218	chr9	64143779	64143859	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-5.2313
chr12	111855068	111855092	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr9	78326652	78326851	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-1.9478
chr4	116940795	116940811	protein_coding	Tmem53	exon	ENSMUSG00000048772	NonProperStrand	3	chr9	120037992	120038052	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-10.9964
chrX	71656287	71656607	protein_coding	G6pdx	exon	ENSMUSG00000031400	ProperStrand	16	chr4	147988651	147988668	protein_coding	Tardbp	utr3	ENSMUSG00000041459	ProperStrand	120	1	-14.6148
chr6	56051505	56051521	protein_coding	Pde1c	utr3	ENSMUSG00000004347	ProperStrand	31	chr5	91034729	91034778	protein_coding	Rassf6	intron	ENSMUSG00000029370	ProperStrand	5	1	-18.6119
chr6	4705144	4705163	protein_coding	Peg10	exon	ENSMUSG00000092035	ProperStrand	102	chr11	98878344	98878411	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-5.2455
chr1	36749329	36750055	protein_coding	Cox5b	exon	ENSMUSG00000061518	ProperStrand	43	chr2	158182164	158185629	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	25	-inf
chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	chr4	131908236	131908352	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-1.8146
chr19	33277076	33277094	protein_coding	Rnls	exon	ENSMUSG00000071573	NonProperStrand	3	chr5	115939535	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-14.2250
chr14	39883367	39883384	protein_coding	Nrg3	intron	ENSMUSG00000041014	NonProperStrand	9	chr2	91436229	91436335	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-11.3732
chr9	62191978	62191995	protein_coding-noncoding	Anp32a	utr5	ENSMUSG00000032249	ProperStrand	2	chr5	45888162	45888576	protein_coding	Lap3	exon	ENSMUSG00000039682	ProperStrand	87	1	-19.5639
chr4	153376394	153376494	protein_coding	BC046331	exon	ENSMUSG00000039523	ProperStrand	6	chr19	8799831	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	2	-15.5065
chr2	26493437	26493517	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr5	138745920	138749736	protein_coding	Stag3	exon	ENSMUSG00000036928	ProperStrand	53	1	-6.4398
chr2	13496057	13496097	protein_coding	Vim	utr5	ENSMUSG00000026728	ProperStrand	33	chr6	38577350	38577366	protein_coding	Klrg2	utr3	ENSMUSG00000071537	NonProperStrand	37	1	-15.4743
chr4	12904216	12904237	lincRNA	Gm11818	intron	ENSMUSG00000055963	NonProperStrand	4	chr17	35089235	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-11.1133
chr17	34161587	34161603	protein_coding	Ring1	utr5	ENSMUSG00000024325	NonProperStrand	1	chr8	113362473	113362493	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	1	-inf
chr3	96527940	96527956	protein_coding	Polr3c	exon	ENSMUSG00000028099	NonProperStrand	75	chr11	69483212	69483283	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.0781
chr3	69293600	69293617	protein_coding	Ppm1l	intron	ENSMUSG00000027784	NonProperStrand	29	chr11	6428088	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.5563
chr9	57788088	57788105	protein_coding	Sema7a	exon	ENSMUSG00000038264	ProperStrand	43	chr7	29136525	29136575	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.9440
chr1	134888559	134888669	protein_coding	Mdm4	utr3	ENSMUSG00000054387	ProperStrand	95	chr1	162965570	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.4660
chr2	5348331	5348431	protein_coding	Camk1d	intron	ENSMUSG00000039145	ProperStrand	50	chr7	80599515	80599533	protein_coding	Chd2	intron	ENSMUSG00000078671	ProperStrand	69	1	-13.4011
chr2	120341775	120341817	protein_coding	Zfp106	exon	ENSMUSG00000027288	ProperStrand	199	chr6	72299471	72299498	protein_coding	0610030E20Rik	utr3	ENSMUSG00000058706	ProperStrand	14	1	-13.8747
chr3	89051044	89053030	protein_coding	Krtcap2	exon	ENSMUSG00000042747	ProperStrand	17	chr17	24857731	24857821	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.6133
chr3	88713829	88714087	protein_coding	Msto1	exon	ENSMUSG00000068922	ProperStrand	36	chr17	13112557	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-5.5727
chr6	92139185	92139220	protein_coding	Zfyve20	utr3	ENSMUSG00000014550	ProperStrand	26	chr10	39978273	39978363	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	8	-20.2303
chr17	67703401	67703420	protein_coding	Ptprm	utr5	ENSMUSG00000033278	ProperStrand	20	chr9	120038491	120038581	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.1184
chr2	167300717	167300817	protein_coding	Slc9a8	utr3	ENSMUSG00000039463	ProperStrand	26	chr4	131908689	131908749	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-9.3064
chr9	39078514	39078530	LINE	L1_Mus2	L1	chr9L1_Mus239078190	ProperStrand	2	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-inf
chr15	60661083	60661099	lincRNA	9930014A18Rik	exon	ENSMUSG00000044513	ProperStrand	54	chr13	46866727	46866743	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	1	-9.4208
chr13	9833562	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr7	150238825	150238877	protein_coding	Cd81	utr5	ENSMUSG00000037706	ProperStrand	88	1	-4.2214
chr19	5798484	5798504	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr9	41782166	41784447	protein_coding	Sorl1	exon	ENSMUSG00000049313	ProperStrand	112	1	-6.3074
chr3	87549233	87549352	protein_coding-noncoding	4933430H15Rik	utr3	ENSMUSG00000023084	ProperStrand	1	chr16	57391761	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	1	-inf
chr4	85016349	85016365	protein_coding	Sh3gl2	intron	ENSMUSG00000028488	NonProperStrand	313	chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	2	-5.6289
chr2	3442831	3442847	protein_coding	Cdnf	utr3	ENSMUSG00000039496	ProperStrand	8	chr2	130102034	130102056	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-9.4448
chr11	69808107	69808197	protein_coding	Gabarap	utr3	ENSMUSG00000018567	ProperStrand	24	chr16	23110475	23110555	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.1305
chr5	120124058	120124077	protein_coding	Tbx3	exon	ENSMUSG00000018604	ProperStrand	87	chr1	74470436	74470453	protein_coding	Vil1	exon	ENSMUSG00000026175	ProperStrand	68	1	-12.3140
chr2	146125209	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	chr1	164635903	164635961	protein_coding	Prrc2c	exon	ENSMUSG00000040225	ProperStrand	413	1	-7.2147
chr2	132078561	132078593	protein_coding	Pcna	exon	ENSMUSG00000027342	ProperStrand	25	chrX	34622906	34622946	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-4.8222
chr11	52934495	52934585	protein_coding	Fstl4	intron	ENSMUSG00000036264	ProperStrand	27	chr1	155723571	155723661	protein_coding	5830403L16Rik	intron	ENSMUSG00000045968	ProperStrand	2	1	-inf
chr11	53351272	53351323	protein_coding	Sept8	exon	ENSMUSG00000018398	ProperStrand	10	chr11	69483180	69483276	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-9.6835
chr12	56954168	56954258	protein_coding	Brms1l	intron	ENSMUSG00000012076	ProperStrand	9	chr11	69481397	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-6.9176
chr1	34934714	34934731	protein_coding	Plekhb2	utr3	ENSMUSG00000026123	ProperStrand	7	chr16	23110454	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-6.6152
chr11	107551911	107551942	protein_coding	Helz	utr3	ENSMUSG00000020721	ProperStrand	60	chr2	158205317	158205402	snoRNA	ENSMUSG00000064585_SNORA71	.	ENSMUSG00000064585	ProperStrand	418	1	-9.4259
mmu-miR-1949	7	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr5	124452305	124452374	protein_coding	Hip1r	utr3	ENSMUSG00000000915	ProperStrand	31	2	-14.9834
mmu-miR-1949	6	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr15	78758456	78760141	protein_coding	Lgals1	exon	ENSMUSG00000068220	ProperStrand	5	3	-18.6499
chr16	33058826	33060190	protein_coding	Rpl35a	exon	ENSMUSG00000060636	ProperStrand	33	chr7	29136568	29136648	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.4248
chr8	88182355	88182404	protein_coding	Neto2	intron	ENSMUSG00000036902	ProperStrand	5	chr2	130103752	130103825	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-13.6295
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	24205199	24205215	protein_coding	Il1rn	utr3	ENSMUSG00000026981	ProperStrand	45	1	-5.0171
chr15	79517803	79517840	protein_coding	Josd1	utr5	ENSMUSG00000022426	ProperStrand	13	chr1	172091566	172091678	protein_coding	Uap1	exon	ENSMUSG00000026670	ProperStrand	18	1	-18.8442
chr16	57391758	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr11	6428058	6428169	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	9	-3.3834
chr1	94753674	94753826	protein_coding	Gpc1	exon	ENSMUSG00000034220	ProperStrand	30	chr5	130300449	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.7596
chr2	179992353	179992691	protein_coding	Rps21	exon	ENSMUSG00000039001	ProperStrand	46	chr9	15119733	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.0997
chr5	5322630	5322646	protein_coding	Cdk14	intron	ENSMUSG00000028926	ProperStrand	20	chr5	108336363	108336413	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-7.0555
chr15	98783909	98783927	protein_coding	Tuba1a	utr5	ENSMUSG00000072235	NonProperStrand	1	chr9	64022854	64022923	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-inf
chr14	64081493	64081513	protein_coding	Fam167a	utr3	ENSMUSG00000035095	ProperStrand	80	chr10	110918639	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-2.9293
chr17	25977826	25977999	protein_coding	Rhot2	exon	ENSMUSG00000025733	ProperStrand	9	chr16	23110871	23110939	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.9939
chr19	7095500	7103192	protein_coding	Stip1	exon	ENSMUSG00000024966	ProperStrand	100	chr5	130300461	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	4	-6.7052
chr10	27892626	27892644	protein_coding	Ptprk	intron	ENSMUSG00000019889	NonProperStrand	24	chr1	89681355	89681396	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-7.2607
chr1	174437147	174437171	protein_coding	Tagln2	utr3	ENSMUSG00000026547	ProperStrand	39	chr7	117189944	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	5	-16.9093
chr7	52975721	52975808	protein_coding	Rpl18	exon	ENSMUSG00000059070	ProperStrand	116	chr1	88247743	88247799	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	4	-12.5398
chr1	35981955	35982055	LTR	ORR1D2	MaLR	chr1ORR1D235981894	NonProperStrand	1	chr10	23506278	23506333	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-inf
chr14	61823518	61823598	protein_coding	Sacs	exon	ENSMUSG00000048279	ProperStrand	65	chr11	97642981	97643071	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	12	-inf
chr8	126343264	126343281	protein_coding	Rab4a	intron	ENSMUSG00000019478	NonProperStrand	15	chr16	23111757	23111783	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.3973
chr11	116535501	116535534	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr17	56715032	56715132	protein_coding	Safb2	exon	ENSMUSG00000042625	ProperStrand	29	1	-7.3570
chr2	146292141	146292241	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	ProperStrand	35	chr7	149054067	149054084	protein_coding	Muc5b	exon	ENSMUSG00000066108	ProperStrand	5	1	-18.8685
chr11	106113811	106113983	protein_coding	Ftsj3	exon	ENSMUSG00000020706	ProperStrand	64	chr9	120039626	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.2015
chr7	13516164	13516191	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr7	28110165	28110181	protein_coding	Ltbp4	exon	ENSMUSG00000040488	ProperStrand	91	1	-7.8341
chr5	100855902	100855974	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr11	55296195	55296332	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	5	-4.3705
chr18	67567105	67569101	protein_coding	Afg3l2	exon	ENSMUSG00000024527	ProperStrand	43	chr10	23505152	23505218	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.7183
chr7	112852032	112852050	protein_coding	Dnhd1	exon	ENSMUSG00000030882	NonProperStrand	6	chr19	25484358	25484374	protein_coding	Kank1	exon	ENSMUSG00000032702	ProperStrand	218	1	-15.4693
chr7	150238938	150248454	protein_coding	Cd81	exon	ENSMUSG00000037706	ProperStrand	88	chr19	8800355	8800392	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-2.8391
chr15	76175109	76175264	protein_coding	Cyc1	exon	ENSMUSG00000022551	ProperStrand	47	chr11	119136228	119136244	protein_coding	Gaa	exon	ENSMUSG00000025579	NonProperStrand	201	1	-11.3811
chr19	6245101	6245527	protein_coding	Atg2a	exon	ENSMUSG00000024773	ProperStrand	97	chr17	24857740	24857780	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.5374
chr2	90235319	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr14	55329702	55330293	protein_coding	Cebpe	exon	ENSMUSG00000052435	NonProperStrand	14	1	-7.3487
chr16	96235326	96235353	protein_coding	Brwd1	exon	ENSMUSG00000022914	ProperStrand	77	chr11	97642952	97643011	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-3.7078
chr6	45494576	45494594	protein_coding	Cntnap2	intron	ENSMUSG00000039419	NonProperStrand	283	chr14	31827490	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-3.9393
chr11	32105444	32105480	protein_coding	Snrnp25	utr5	ENSMUSG00000040767	ProperStrand	5	chr16	23110828	23110917	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-7.3377
chr2	24205199	24205215	protein_coding	Il1rn	utr3	ENSMUSG00000026981	ProperStrand	45	chr6	72848823	72848840	protein_coding	Kcmf1	intron	ENSMUSG00000055239	ProperStrand	26	1	-15.5721
chr1	89318084	89318129	protein_coding	Gigyf2	exon	ENSMUSG00000048000	ProperStrand	128	chr4	131866176	131866266	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	3	-6.1952
chr11	100683585	100683602	protein_coding	Stat5b	utr5	ENSMUSG00000020919	NonProperStrand	5	chr4	131865866	131865946	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-6.5022
chr18	75979995	75980012	protein_coding	Zbtb7c	utr5	ENSMUSG00000044646	ProperStrand	64	chr9	39358287	39358304	protein_coding	Olfr958	exon	ENSMUSG00000050853	NonProperStrand	266	1	-10.1983
chr11	68603801	68603820	protein_coding	Myh10	intron	ENSMUSG00000020900	ProperStrand	91	chr19	8798740	8798764	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-4.0082
chr13	55418297	55418397	protein_coding	Nsd1	utr3	ENSMUSG00000021488	ProperStrand	186	chr2	26493366	26493420	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-3.2679
chr2	139519127	139519144	protein_coding	Ism1	intron	ENSMUSG00000074766	NonProperStrand	10	chr11	62416601	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-14.0862
chr2	103588240	103588355	protein_coding	Nat10	exon	ENSMUSG00000027185	NonProperStrand	64	chr8	26827320	26827337	protein_coding	Whsc1l1	utr3	ENSMUSG00000054823	NonProperStrand	17	1	-15.7397
chr14	59820305	59820338	protein_coding	Rcbtb1	utr5	ENSMUSG00000035469	ProperStrand	39	chr10	80641699	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	1	-8.4112
chr6	67222013	67222212	protein_coding	Serbp1	exon	ENSMUSG00000036371	ProperStrand	261	chr11	62416600	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	9	-inf
chr10	79877933	79877987	protein_coding	Tcf3	exon	ENSMUSG00000020167	ProperStrand	73	chr18	35716829	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.8536
chr17	14036066	14036124	protein_coding	Mllt4	exon	ENSMUSG00000068036	ProperStrand	156	chr7	117190018	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	6	-11.1335
chr9	100966289	100966307	SINE	B4A	B4	chr9B4A100966214	ProperStrand	51	chrX	70237450	70237471	miRNA	Mir2137	.	ENSMUSG00000089357	ProperStrand	50	1	-14.0074
chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	chr17	24665467	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-0.7195
chr1	182518151	182518193	protein_coding	Parp1	exon	ENSMUSG00000026496	ProperStrand	227	chr5	121655063	121655099	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-1.4915
chr19	7107027	7107117	protein_coding	Stip1	exon	ENSMUSG00000024966	ProperStrand	100	chr4	131908281	131908360	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.7641
chr6	122273691	122273762	protein_coding	Phc1	exon	ENSMUSG00000040669	ProperStrand	158	chr19	8800367	8800457	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-3.3882
chr11	97489600	97489617	protein_coding	E130012A19Rik	exon	ENSMUSG00000043439	NonProperStrand	110	chr11	62416598	62416629	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-4.0076
chr15	97811251	97811267	protein_coding	Col2a1	exon	ENSMUSG00000022483	ProperStrand	34	chr2	158184130	158184195	snoRNA	ENSMUSG00000064995_SNORA71	.	ENSMUSG00000064995	ProperStrand	430	1	-10.5145
chr14	70483147	70483237	SINE	B2_Mm2	B2	chr14B2_Mm270483065	NonProperStrand	1	chr14	70246329	70246409	protein_coding	Pebp4	intron	ENSMUSG00000022085	NonProperStrand	4	1	-inf
chr17	32530851	32530867	protein_coding	Rasal3	exon	ENSMUSG00000052142	ProperStrand	2	chr11	106362638	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-14.8626
chr10	51981551	51981685	protein_coding	Dcbld1	exon	ENSMUSG00000019891	ProperStrand	21	chr5	126268127	126268145	protein_coding	Tmem132b	exon	ENSMUSG00000029483	ProperStrand	1	1	-inf
chr17	85127747	85127847	protein_coding	Lrpprc	intron	ENSMUSG00000024120	ProperStrand	98	chr19	8963087	8963164	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.5030
chr9	7818520	7818603	protein_coding	Birc2	utr3	ENSMUSG00000057367	ProperStrand	12	chr1	162965986	162966041	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-11.0138
chr2	84512536	84512559	protein_coding	Tmx2	utr3	ENSMUSG00000050043	ProperStrand	31	chr19	8800355	8800448	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-4.7823
chr9	15119967	15120039	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	chr1	162966002	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	5	-0.8240
chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	chr7	117189905	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	5	-9.6717
chr13	51245384	51245400	protein_coding	Spin1	utr3	ENSMUSG00000021395	NonProperStrand	5	chr16	23110904	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr4	128609449	128609513	protein_coding	Adc	utr3	ENSMUSG00000028789	ProperStrand	10	chr11	97642992	97643082	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-5.8808
chr1	66221974	66221990	protein_coding	Mtap2	utr5	ENSMUSG00000015222	NonProperStrand	18	chr14	15592853	15594889	protein_coding	Slc4a7	exon	ENSMUSG00000021733	ProperStrand	24	1	-17.4927
chr9	108467543	108467704	protein_coding	Impdh2	exon	ENSMUSG00000062867	ProperStrand	74	chr8	102555961	102556051	pseudogene	Gm15210	.	ENSMUSG00000071041	ProperStrand	5	5	-inf
chr7	147172358	147172639	protein_coding	Adam8	exon	ENSMUSG00000025473	NonProperStrand	5	chr16	23111777	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-11.1437
chr8	14975976	14977551	protein_coding	Arhgef10	exon	ENSMUSG00000071176	ProperStrand	22	chr17	35299506	35299565	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-6.7562
chr8	72932897	72963360	protein_coding	Crtc1	exon	ENSMUSG00000003575	ProperStrand	14	chr14	76247711	76247752	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-7.0446
chr4	86500721	86500811	protein_coding	Rps6	exon	ENSMUSG00000028495	ProperStrand	263	chr15	98350203	98350283	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	2	-3.7548
chr1	162967510	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	chr19	44188491	44188591	snoRNA	ENSMUSG00000077391_SNORA12	.	ENSMUSG00000077391	ProperStrand	506	12	-13.9069
chr19	12040729	12040777	protein_coding	Osbp	exon	ENSMUSG00000024687	ProperStrand	19	chr11	69483158	69483258	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.5692
chr19	31157940	31157958	protein_coding	Prkg1	intron	ENSMUSG00000052920	ProperStrand	32	chr9	15118322	15118367	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-4.6545
chr7	19842861	19842951	protein_coding	Vasp	utr3	ENSMUSG00000030403	ProperStrand	28	chr9	120039584	120039664	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-4.7581
chr1	36891755	36894854	protein_coding	Tmem131	exon	ENSMUSG00000026116	ProperStrand	129	chr16	18240837	18240927	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	1	-7.5969
chr8	85289913	85290585	protein_coding	Zfp330	exon	ENSMUSG00000031711	ProperStrand	75	chr7	116664811	116664901	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.1729
chr8	32239595	32239611	protein_coding	Rnf122	utr3	ENSMUSG00000039328	NonProperStrand	42	chr13	49779719	49779805	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	3	-17.2721
chr7	72001137	72001154	protein_coding-noncoding	Fam189a1	utr3	ENSMUSG00000030518	NonProperStrand	11	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.8470
chr10	98726553	98726570	protein_coding	Dusp6	exon	ENSMUSG00000019960	ProperStrand	116	chr16	90386834	90386853	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	1	-10.8844
chr5	102235635	102237709	protein_coding	Cds1	exon	ENSMUSG00000029330	ProperStrand	9	chr4	117317929	117317963	protein_coding	Eri3	intron	ENSMUSG00000033423	ProperStrand	246	1	-14.3668
chr18	36263510	36263600	protein_coding	Nrg2	intron	ENSMUSG00000060275	ProperStrand	16	chr15	34370597	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-6.1134
chr11	99086375	99089607	protein_coding	Smarce1	exon	ENSMUSG00000037935	ProperStrand	38	chr17	35088957	35089013	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-6.7722
chr7	52474561	52475873	protein_coding	Tead2	exon	ENSMUSG00000030796	ProperStrand	39	chr19	8798773	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-5.6406
chr7	19850143	19856921	protein_coding	Vasp	utr5	ENSMUSG00000030403	ProperStrand	28	chr19	8963096	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	4	-12.2040
chr15	79910845	79910865	protein_coding	Rpl3	exon	ENSMUSG00000060036	ProperStrand	8342	chr19	8963032	8963048	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-1.0425
chr5	74489232	74489317	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr10	127953800	127954085	protein_coding	Esyt1	exon	ENSMUSG00000025366	ProperStrand	31	1	-6.9303
chr3	102008455	102008510	protein_coding	Vangl1	utr5	ENSMUSG00000027860	ProperStrand	25	chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	1	-10.9571
chr6	73210494	73210574	protein_coding	Suclg1	exon	ENSMUSG00000052738	ProperStrand	12	chr7	117189888	117189978	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-6.4655
chr7	26543684	26543752	protein_coding	Axl	exon	ENSMUSG00000002602	ProperStrand	6	chr1	66521957	66521973	protein_coding	Unc80	intron	ENSMUSG00000055567	NonProperStrand	212	1	-15.5065
chr8	98259670	98260215	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	chr6	71832550	71832573	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	2	-4.4352
chr3	148622371	148622461	protein_coding	Lphn2	intron	ENSMUSG00000028184	ProperStrand	20	chr16	23111374	23111454	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-10.7842
chr2	90235294	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	5	-7.9141
chr7	52378536	52378559	protein_coding	Rps11	exon	ENSMUSG00000003429	ProperStrand	49	chr19	8963032	8963048	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-10.5634
chr10	127798463	127798553	protein_coding	Cs	utr3	ENSMUSG00000005683	ProperStrand	63	chr11	97642992	97643072	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.3888
chr3	122322482	122322557	protein_coding	Fnbp1l	utr5	ENSMUSG00000039735	ProperStrand	37	chr17	13115767	13115783	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	2	-13.5404
chr11	97580005	97580027	protein_coding	Pip4k2b	utr3	ENSMUSG00000018547	ProperStrand	46	chr2	118611946	118611962	protein_coding	Disp2	exon	ENSMUSG00000040035	NonProperStrand	204	1	-11.3949
chr12	82048832	82048885	protein_coding-noncoding	Srsf5	utr5	ENSMUSG00000021134	ProperStrand	10	chr1	162966000	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-11.6137
chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-2.7144
chrY	257976	257993	protein_coding	Kdm5d	exon	ENSMUSG00000056673	ProperStrand	7	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-7.5326
chr11	115451723	115451739	protein_coding	Gga3	exon	ENSMUSG00000020740	NonProperStrand	50	chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-6.8159
chr8	109410086	109410208	protein_coding	Chtf8	utr5	ENSMUSG00000046691	ProperStrand	33	chr16	23110965	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.8807
chr2	90235293	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr16	58670846	58670863	protein_coding	Cpox	exon	ENSMUSG00000022742	ProperStrand	7	1	-8.8025
chr16	14192190	14192280	protein_coding	Nde1	utr3	ENSMUSG00000022678	ProperStrand	23	chr4	131908265	131908345	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.9964
chr11	62416575	62416605	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr16	37384897	37384913	protein_coding	Stxbp5l	utr5	ENSMUSG00000022829	ProperStrand	332	1	-5.5848
chr8	131256600	131256616	protein_coding	Itgb1	utr3	ENSMUSG00000025809	NonProperStrand	1	chr19	8963027	8963084	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-inf
chr4	131908357	131908715	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr15	79913287	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	5	-0.8181
chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	chr14	76247753	76247777	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-0.7639
chr4	43505809	43505889	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr15	9042828	9042918	protein_coding	Skp2	utr3	ENSMUSG00000054115	ProperStrand	14	1	-5.8657
chr11	87172190	87172206	protein_coding	Ppm1e	exon	ENSMUSG00000046442	ProperStrand	112	chr9	15119693	15119759	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.6149
chr19	45657573	45657595	protein_coding	Fbxw4	intron	ENSMUSG00000040913	ProperStrand	18	chr19	8963027	8963082	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.4763
chr9	120038384	120039261	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	chr10	127483243	127483818	protein_coding	Naca	exon	ENSMUSG00000061315	ProperStrand	50	1	-9.8903
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr3	90028592	90028649	protein_coding	Rab13	intron	ENSMUSG00000027935	NonProperStrand	18	1	-10.4102
chr18	10052132	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr6	145564547	145564563	protein_coding	Tuba3b	utr5	ENSMUSG00000067338	ProperStrand	152	1	-6.9496
chr9	78023108	78023156	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chrX	71589885	71589907	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	1	-2.9013
chr16	16417534	16417552	protein_coding	Fgd4	utr3	ENSMUSG00000022788	ProperStrand	9	chr9	78327238	78327438	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-10.1948
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr15	81213441	81218824	protein_coding	St13	exon	ENSMUSG00000022403	ProperStrand	59	1	-8.6393
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chrX	166421932	166421954	protein_coding	Mid1	exon	ENSMUSG00000035299	ProperStrand	209	1	-5.5103
chrX	138159145	138159161	protein_coding	Irs4	exon	ENSMUSG00000054667	NonProperStrand	98	chr2	26493391	26493485	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-2.8522
chr11	30720140	30720983	protein_coding	Psme4	exon	ENSMUSG00000040850	ProperStrand	40	chr9	15119353	15119425	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-5.9028
chr8	98285251	98286898	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	chr1	162968214	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-3.6205
chr11	116535927	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr4	140258108	140258208	protein_coding	Rcc2	exon	ENSMUSG00000040945	ProperStrand	228	6	-17.4893
chr12	111854934	111891632	protein_coding	Dync1h1	intron	ENSMUSG00000018707	ProperStrand	648	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	14	-13.1683
chrX	139155042	139155059	protein_coding	Tmem164	intron	ENSMUSG00000047045	NonProperStrand	29	chr7	52382010	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-8.1670
chr18	37911790	37911806	protein_coding	Pcdhga9	intron	ENSMUSG00000023036	ProperStrand	245	chr8	13416896	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-3.7447
chr14	35225594	35225611	protein_coding	Bmpr1a	utr3	ENSMUSG00000021796	ProperStrand	21	chr17	39985668	39985719	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-8.0313
chr8	27091218	27091234	protein_coding	4930444A02Rik	utr3	ENSMUSG00000037251	NonProperStrand	57	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-5.9433
chr1	88252837	88252856	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	chr13	23528224	23528284	tRNA	tRNA103-LysCTT	.	1019197	ProperStrand	180	1	-4.5010
chr1	99873542	99873559	protein_coding	Pam	utr5	ENSMUSG00000026335	NonProperStrand	9	chr11	79762415	79762431	protein_coding	Utp6	exon	ENSMUSG00000035575	ProperStrand	28	1	-18.3648
chr6	72383829	72384981	protein_coding	Mat2a	utr3	ENSMUSG00000053907	ProperStrand	51	chr10	23505152	23505282	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-4.3338
chr2	90235315	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	42440243	42440259	protein_coding	Gabrb2	exon	ENSMUSG00000007653	ProperStrand	248	2	-3.5068
chr11	109260587	109260624	protein_coding	Gna13	utr3	ENSMUSG00000020611	ProperStrand	23	chr19	8963027	8963175	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	6	-inf
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr10	5991483	5991511	protein_coding	Akap12	exon	ENSMUSG00000038587	ProperStrand	1008	1	-1.3150
chr10	62045024	62045061	protein_coding	Ddx21	utr3	ENSMUSG00000020075	ProperStrand	137	chr9	15119976	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-5.6250
chr1	166376580	166376621	protein_coding	Atp1b1	intron	ENSMUSG00000026576	ProperStrand	67	chr1	72207058	72207158	protein_coding	Mreg	utr3	ENSMUSG00000039395	ProperStrand	63	1	-12.9950
chr16	11144172	11144262	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr2	127167422	127167439	protein_coding	Astl	utr5	ENSMUSG00000050468	NonProperStrand	10	1	-14.1233
chr2	32781400	32781417	protein_coding	Lrsam1	utr3	ENSMUSG00000026792	ProperStrand	80	chr17	24857732	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	6	-11.7203
chr14	76815734	76815824	protein_coding	Tsc22d1	utr5	ENSMUSG00000022010	ProperStrand	86	chr3	68889160	68889240	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-2.6183
chr7	107982620	107982663	protein_coding	Fam168a	exon	ENSMUSG00000029461	ProperStrand	14	chr10	23505237	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.6795
chr16	20509034	20509065	protein_coding	Eif2b5	exon	ENSMUSG00000003235	ProperStrand	38	chr9	15119644	15119764	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-8.6482
chr12	32622546	32628090	protein_coding	Hbp1	intron	ENSMUSG00000002996	ProperStrand	26	chr4	131865855	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-11.0736
chrX	96245892	96245908	protein_coding	Stard8	intron	ENSMUSG00000031216	ProperStrand	142	chrX	99380390	99380414	protein_coding	Rps4x	exon	ENSMUSG00000031320	ProperStrand	139	1	-9.8982
chr9	4796011	4796029	protein_coding	Gria4	utr5	ENSMUSG00000025892	ProperStrand	20	chr11	6428098	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.2839
chr7	54109461	54110421	protein_coding	Ldha	exon	ENSMUSG00000063229	ProperStrand	280	chr8	98269984	98270064	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	11	-19.0147
chr11	118900007	118900024	protein_coding	Cbx8	exon	ENSMUSG00000025578	ProperStrand	95	chr11	120148960	120148976	protein_coding	Bahcc1	exon	ENSMUSG00000039741	NonProperStrand	268	1	-9.3911
chr19	56603879	56603969	protein_coding	Dclre1a	utr3	ENSMUSG00000025077	ProperStrand	3	chr19	8800383	8800463	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-9.7434
chr6	125399469	125399486	Simple_repeat	(TCTCC)n	Simple_repeat	chr6(TCTCC)n125399468	NonProperStrand	16	chr4	131908357	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.6705
chr15	99548653	99548669	protein_coding	Gpd1	exon	ENSMUSG00000023019	ProperStrand	40	chr8	73419754	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.8776
chr3	134151041	134151057	lincRNA	Gm16742	intron	ENSMUSG00000084777	NonProperStrand	42	chr9	120037910	120037933	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-5.3984
chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr2	73200537	73200553	protein_coding	Gpr155	exon	ENSMUSG00000041762	ProperStrand	33	1	-7.6466
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	12860706	12860722	protein_coding	Slc22a1	intron	ENSMUSG00000023829	NonProperStrand	11	1	-7.8469
chr10	114838670	114838710	protein_coding	Zfc3h1	utr5	ENSMUSG00000034163	ProperStrand	58	chr4	131865933	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-3.3377
chr11	80196824	80196899	protein_coding	Zfp207	utr5	ENSMUSG00000017421	ProperStrand	21	chr5	121655026	121655126	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.7781
chr11	88007377	88007410	protein_coding	Cuedc1	utr3	ENSMUSG00000018378	ProperStrand	7	chr11	69481334	69481431	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-12.1751
chrX	75424255	75424272	LINE	Lx9	L1	chrXLx975424188	ProperStrand	5	chr11	74978710	74978729	protein_coding	Hic1	utr3	ENSMUSG00000043099	NonProperStrand	8	1	-18.7911
chr11	109314568	109314658	protein_coding	Slc16a6	exon	ENSMUSG00000041920	ProperStrand	15	chr5	130300470	130300550	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-5.1031
chr16	11113521	11113560	protein_coding	Txndc11	intron	ENSMUSG00000022498	ProperStrand	11	chr13	51743567	51743647	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	2	-16.3544
chr3	152450608	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	chr1	164634931	164635007	protein_coding	Prrc2c	exon	ENSMUSG00000040225	ProperStrand	413	3	-11.7444
chr18	10052128	10052151	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr5	116010927	116010969	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	1	-5.6745
chr9	114345757	114352368	protein_coding	Glb1	intron	ENSMUSG00000045594	ProperStrand	67	chr4	131908689	131908751	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-2.1171
chr2	32475247	32475283	protein_coding	St6galnac6	utr3	ENSMUSG00000026811	ProperStrand	17	chr4	131865417	131865479	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	3	-14.9631
chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	chr4	134896434	134896534	protein_coding	Srrm1	exon	ENSMUSG00000028809	ProperStrand	142	2	-13.8888
chr3	96363533	96363593	protein_coding	Txnip	exon	ENSMUSG00000038393	ProperStrand	172	chr2	26494708	26494751	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.3850
chr16	17859530	17859595	protein_coding	Dgcr2	exon	ENSMUSG00000003166	ProperStrand	45	chr14	16271120	16271137	protein_coding	Lrrc3b	utr5	ENSMUSG00000045201	ProperStrand	10	1	-17.6220
chr13	42251355	42251402	protein_coding	Hivep1	exon	ENSMUSG00000021366	ProperStrand	24	chr4	131908236	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-7.6045
chr6	65886018	65886095	protein_coding	Prdm5	exon	ENSMUSG00000029913	ProperStrand	50	chr6	115755704	115757042	protein_coding	Rpl32	exon	ENSMUSG00000057841	ProperStrand	137	1	-12.0231
chr7	13516167	13516197	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr17	39985691	39985724	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-1.7171
chr2	26494766	26494866	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr17	85480486	85480504	protein_coding	Prepl	exon	ENSMUSG00000024127	ProperStrand	106	1	-5.0824
chr4	122972272	122972519	protein_coding	Pabpc4	exon	ENSMUSG00000011257	ProperStrand	85	chr6	84063390	84063605	protein_coding	Dysf	exon	ENSMUSG00000033788	ProperStrand	26	1	-14.3017
chr12	15728561	15728651	Low_complexity	GA-rich	Low_complexity	chr12GA-rich15728576	NonProperStrand	1	chr12	15728861	15728941	Simple_repeat	(CAGGA)n	Simple_repeat	chr12(CAGGA)n15728781	NonProperStrand	1	1	-inf
chr11	87424962	87424978	protein_coding	Mtmr4	exon	ENSMUSG00000018401	ProperStrand	14	chr16	11144194	11144294	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	1	-13.4261
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chrX	132123169	132123187	protein_coding	Nxf7	exon	ENSMUSG00000031410	ProperStrand	1	1	-inf
chr4	116826698	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	chr8	73419657	73419775	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	15	-4.0574
chr7	117189957	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	chr19	8800084	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	5	-0.8910
chr5	77710511	77710605	protein_coding	Rest	exon	ENSMUSG00000029249	ProperStrand	136	chr7	82292526	82292543	protein_coding	Sv2b	exon	ENSMUSG00000053025	ProperStrand	9	3	-19.9240
chr5	138608438	138608455	protein_coding	Mcm7	exon	ENSMUSG00000029730	NonProperStrand	10	chr11	97488965	97489067	protein_coding	E130012A19Rik	utr3	ENSMUSG00000043439	ProperStrand	83	1	-16.3338
mmu-miR-5100	2	20	miRNA	mmu-miR-5100	.	mmu-miR-5100	ProperStrand	132	chr9	15119332	15119425	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	2	-6.1214
chr4	3762384	3762669	protein_coding	Rps20	exon	ENSMUSG00000028234	ProperStrand	71	chr17	35089182	35089235	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-5.1573
chr2	120095498	120095516	protein_coding	Pla2g4d	intron	ENSMUSG00000070719	ProperStrand	1	chr17	35087910	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-inf
chr1	18339329	18339346	LINE	L1_Mus1	L1	chr1L1_Mus118333638	ProperStrand	2	chr12	17287199	17287265	protein_coding	Pdia6	exon	ENSMUSG00000020571	ProperStrand	114	1	-20.8086
chr5	74489543	74489565	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr2	24205199	24205215	protein_coding	Il1rn	utr3	ENSMUSG00000026981	ProperStrand	45	1	-6.1882
chr7	149246499	149246515	protein_coding	Mob2	utr5	ENSMUSG00000025147	ProperStrand	20	chr7	52382234	52382315	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-10.5050
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr3	157729963	157729979	protein_coding	Lrrc40	utr3	ENSMUSG00000063052	ProperStrand	147	1	-6.9313
chr14	56994360	56994379	protein_coding	Atp12a	intron	ENSMUSG00000022229	NonProperStrand	4	chr2	172859140	172859240	protein_coding	Rbm38	exon	ENSMUSG00000027510	ProperStrand	33	1	-19.0852
chr19	4318795	4318880	protein_coding	Kdm2a	utr3	ENSMUSG00000054611	ProperStrand	71	chr7	116664794	116664884	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.2637
chr15	81354775	81354791	SINE	B3A	B2	chr15B3A81354761	ProperStrand	16	chr4	106260201	106260227	protein_coding	Dhcr24	utr3	ENSMUSG00000034926	ProperStrand	94	1	-15.0794
chr6	5106755	5106835	protein_coding	Ppp1r9a	intron	ENSMUSG00000032827	ProperStrand	50	chr17	35960302	35960319	protein_coding	Flot1	utr5	ENSMUSG00000059714	ProperStrand	8	1	-17.5475
chr13	46735424	46735453	protein_coding	Cap2	exon	ENSMUSG00000021373	ProperStrand	1	chr16	23110537	23110585	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-inf
chr11	116535914	116535982	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr2	32817270	32817336	protein_coding	Rpl12	utr5	ENSMUSG00000038900	ProperStrand	167	1	-3.9420
chr4	135606260	135608582	protein_coding	Rpl11	exon	ENSMUSG00000059291	ProperStrand	152	chr16	23110851	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	10	-3.0024
chr12	67384714	67384731	protein_coding	Rpl10l	exon	ENSMUSG00000060499	ProperStrand	4	chr11	6428108	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-14.3166
chr9	114532001	114532021	protein_coding	Cnot10	exon	ENSMUSG00000056167	ProperStrand	16	chr4	131865856	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-6.9631
chr8	129116530	129116577	protein_coding	Irf2bp2	exon	ENSMUSG00000051495	ProperStrand	25	chr8	13876096	13876196	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	2	-14.1586
chr12	30604781	30604797	protein_coding	Myt1l	exon	ENSMUSG00000061911	ProperStrand	38	chr7	29136525	29136575	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.1665
chr2	164333372	164333472	protein_coding	Pigt	utr3	ENSMUSG00000017721	ProperStrand	45	chr17	24857795	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.7918
chr7	112788459	112788539	protein_coding	Arfip2	intron	ENSMUSG00000030881	NonProperStrand	2	chr7	112788585	112788675	protein_coding	Fxc1	utr5	ENSMUSG00000089847	ProperStrand	2	1	-inf
chr9	85736522	85736542	protein_coding	Tpbg	utr5	ENSMUSG00000035274	ProperStrand	8	chr11	6428076	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	4	-inf
chr19	10699816	10700472	protein_coding	Ddb1	exon	ENSMUSG00000024740	ProperStrand	304	chr4	41160815	41160855	protein_coding	Ubap2	utr5	ENSMUSG00000028433	ProperStrand	292	5	-19.7326
chr2	135658807	135824418	protein_coding	Plcb4	exon	ENSMUSG00000039943	NonProperStrand	57	chr17	35087896	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	2	-8.7030
chr11	107417605	107417623	protein_coding	Helz	intron	ENSMUSG00000020721	ProperStrand	60	chr9	15119630	15119698	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-4.6142
chr3	100855460	100855550	protein_coding	Ptgfrn	intron	ENSMUSG00000027864	ProperStrand	67	chr9	120039569	120039659	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.1188
chr1	193714376	193714392	protein_coding-noncoding	1700034H15Rik	utr3	ENSMUSG00000055833	NonProperStrand	2	chr2	63936034	63936052	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-15.3248
chr7	149558067	149558084	protein_coding	6330512M04Rik	utr5	ENSMUSG00000045777	NonProperStrand	17	chr11	106362304	106362340	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-8.3710
chr7	17150375	17150392	protein_coding	Grlf1	exon	ENSMUSG00000058230	ProperStrand	38	chr7	116663650	116663740	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.3231
chr5	118477951	118477967	protein_coding	Tesc	exon	ENSMUSG00000029359	ProperStrand	114	chr6	70794803	70794820	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	1	-10.1329
chr2	146125209	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	chr4	69884088	69884104	protein_coding	Cdk5rap2	utr3	ENSMUSG00000039298	ProperStrand	810	1	-5.8910
chr19	56693364	56693454	LINE	Lx7	L1	chr19Lx756693367	ProperStrand	1	chr19	56693612	56693692	SINE	B3A	B2	chr19B3A56693603	NonProperStrand	1	1	-inf
chr14	99700829	99700916	protein_coding	Klf5	exon	ENSMUSG00000005148	ProperStrand	39	chr4	131866155	131866245	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-7.4699
chr13	54848608	54848624	protein_coding	Gprin1	intron	ENSMUSG00000069227	ProperStrand	55	chr18	73693113	73693138	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-5.6945
chr19	40911464	40911535	protein_coding	Ccnj	exon	ENSMUSG00000025010	ProperStrand	3	chr3	55435951	55435967	protein_coding	Nbea	exon	ENSMUSG00000027799	NonProperStrand	115	1	-18.4605
chr7	6331994	6332016	protein_coding	Zfp78	exon	ENSMUSG00000055150	ProperStrand	2	chr7	28051814	28053842	protein_coding	Numbl	exon	ENSMUSG00000063160	ProperStrand	35	1	-inf
chr7	129085576	129085593	protein_coding	Cog7	intron	ENSMUSG00000034951	ProperStrand	29	chr9	120038465	120038512	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.3936
chr8	13416897	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr19	9051900	9052079	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	1	-2.8160
chr11	119684318	119704996	antisense	A430071A18Rik	.	ENSMUSG00000085081	ProperStrand	8	chr11	62416605	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-14.8395
chr10	80462170	80462189	protein_coding	Gng7	intron	ENSMUSG00000048240	ProperStrand	21	chr7	116664870	116664889	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-4.4850
chr7	3571625	3571723	protein_coding	Ndufa3	utr3	ENSMUSG00000035674	ProperStrand	1	chr9	15119722	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-inf
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr7	29136525	29136647	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-3.0370
chr19	8798517	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	chr9	40611685	40611723	snoRNA	ENSMUSG00000075876_Snord14c	.	ENSMUSG00000075876	ProperStrand	104	2	-6.9556
chr8	74008400	74008417	protein_coding	Ano8	exon	ENSMUSG00000034863	NonProperStrand	171	chr12	17552949	17553031	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-3.1243
chr11	116401163	116401275	protein_coding	Ube2o	exon	ENSMUSG00000020802	ProperStrand	134	chr9	85637591	85637607	protein_coding	Ibtk	utr5	ENSMUSG00000035941	NonProperStrand	22	1	-13.7350
chr11	67167096	67167112	protein_coding	Myh13	exon	ENSMUSG00000060180	ProperStrand	145	chr7	117189863	117189922	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-4.4957
chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-3.0051
chr16	18241851	18241951	protein_coding	Ranbp1	exon	ENSMUSG00000005732	ProperStrand	22	chr4	131908236	131908344	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-10.8249
chr8	112203333	112206007	protein_coding	2400003C14Rik	exon	ENSMUSG00000031729	ProperStrand	30	chr9	63042015	63042031	protein_coding	Map2k5	exon	ENSMUSG00000058444	ProperStrand	193	1	-12.3719
chr17	75690723	75690739	protein_coding	Ltbp1	exon	ENSMUSG00000001870	ProperStrand	136	chr9	55889948	55889990	protein_coding	Rcn2	exon	ENSMUSG00000032320	ProperStrand	11	1	-15.1255
chrX	166428065	166428101	protein_coding	Mid1	utr3	ENSMUSG00000035299	ProperStrand	209	chr3	141129296	141129313	protein_coding	Unc5c	intron	ENSMUSG00000059921	NonProperStrand	19	1	-13.1430
chr5	3693225	3693241	protein_coding	Ankib1	exon	ENSMUSG00000040351	NonProperStrand	98	chr4	131865859	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.0689
chr3	33967165	33967919	protein_coding	Fxr1	utr3	ENSMUSG00000027680	ProperStrand	58	chr5	74489564	74489631	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-3.8413
chr7	52378458	52378480	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	chr4	56910496	56910612	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	5	-8.8828
chr1	106948654	106948744	LTR	MTD	MaLR	chr1MTD106948669	ProperStrand	1	chr1	106948382	106948462	LTR	MTE2a	MaLR	chr1MTE2a106948174	NonProperStrand	1	1	-inf
chr2	130109497	130109513	protein_coding	Idh3b	exon	ENSMUSG00000027406	ProperStrand	146	chr6	71832629	71832668	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-3.9063
chr10	126504905	126504956	protein_coding	Tspan31	utr3	ENSMUSG00000006736	ProperStrand	9	chr19	8963050	8963124	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.8692
chrX	34622929	34623019	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	chr2	166890780	166890829	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	1	-0.8967
chr17	46814084	46814100	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr9	44598075	44598093	protein_coding	Ift46	intron	ENSMUSG00000002031	NonProperStrand	28	1	-10.7693
chr6	103599179	103599269	protein_coding	Chl1	intron	ENSMUSG00000030077	NonProperStrand	4	chr2	98502686	98506473	protein_coding	Gm10801	intron	ENSMUSG00000075015	NonProperStrand	4	2	-inf
chr14	87905919	87906009	protein_coding	Tdrd3	exon	ENSMUSG00000022019	ProperStrand	19	chr17	24857781	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.3961
chr3	108236027	108236066	protein_coding	Sars	exon	ENSMUSG00000068739	ProperStrand	45	chr4	131908240	131908298	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.8531
chr17	26908302	26908323	protein_coding	A930001N09Rik	exon	ENSMUSG00000048249	ProperStrand	18	chr3	68889121	68889215	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	5	-19.6008
chr12	68768930	68769020	LINE	L1Md_F2	L1	chr12L1Md_F268768613	NonProperStrand	12	chr16	25720356	25720436	protein_coding	Trp63	intron	ENSMUSG00000022510	ProperStrand	4	1	-20.4237
chr15	98692965	98692982	protein_coding	Mll2	exon	ENSMUSG00000048154	NonProperStrand	20	chr16	23110526	23110557	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.4825
chr1	171440622	171440638	protein_coding	Nuf2	exon	ENSMUSG00000026683	NonProperStrand	3	chr7	118219574	118219626	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-10.4323
chr19	4887935	4888025	protein_coding	Bbs1	utr3	ENSMUSG00000006464	ProperStrand	2	chr9	15119662	15119742	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-9.8289
chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	chr17	39985356	39985447	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-1.9618
chr14	48161490	48161571	protein_coding	Atg14	utr3	ENSMUSG00000037526	ProperStrand	12	chr10	23505150	23505242	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	8	-inf
chr15	99329179	99329195	protein_coding	Faim2	utr3	ENSMUSG00000023011	ProperStrand	45	chr18	33954816	33954906	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-4.0424
chr18	64328476	64328492	antisense	1700091E21Rik	.	ENSMUSG00000086128	NonProperStrand	35	chr11	69483237	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.4080
chr14	30804051	30804120	protein_coding	Actr8	exon	ENSMUSG00000015971	ProperStrand	7	chr1	162965980	162966021	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-7.8886
chr8	113821143	113821226	protein_coding	Rfwd3	exon	ENSMUSG00000033596	ProperStrand	71	chr11	116938663	116938753	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	5	-inf
chr13	99629854	99630606	protein_coding	Tnpo1	exon	ENSMUSG00000009470	ProperStrand	56	chr11	84634790	84634907	protein_coding	Dhrs11	exon	ENSMUSG00000034449	ProperStrand	12	1	-16.7620
chr11	102294589	102294607	protein_coding	Grn	exon	ENSMUSG00000034708	ProperStrand	43	chr2	130102015	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	NonProperStrand	12	1	-17.5026
chr7	109012605	109016925	protein_coding	Folr1	utr5	ENSMUSG00000001827	ProperStrand	12	chr8	13416897	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-9.7127
chr4	21922274	21922291	protein_coding-noncoding	6230409E13Rik	utr5	ENSMUSG00000028246	ProperStrand	18	chr13	23643364	23643418	protein_coding	Hist1h4f	exon	ENSMUSG00000069274	ProperStrand	28	1	-17.1466
chr14	19101640	19101664	protein_coding	Rpl15	exon	ENSMUSG00000012405	ProperStrand	145	chr1	162965986	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-2.0612
chr2	59149959	59156638	protein_coding	Pkp4	exon	ENSMUSG00000026991	ProperStrand	33	chr16	23110916	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.9284
chr18	10052132	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr19	6261807	6261824	protein_coding	Atg2a	exon	ENSMUSG00000024773	ProperStrand	97	2	-12.5251
chr2	120872244	120872260	protein_coding	Tgm5	exon	ENSMUSG00000053675	NonProperStrand	163	chr7	52381737	52381761	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-5.6018
chr11	93999798	93999888	lincRNA	B230206L02Rik	exon	ENSMUSG00000086003	ProperStrand	13	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-6.5816
chr5	83494605	83494622	LINE	Lx9	L1	chr5Lx983494608	ProperStrand	2	chr11	61241371	61241389	LTR	MT2A	ERVL	chr11MT2A61241243	NonProperStrand	3	1	-inf
chr4	56848288	56848307	protein_coding	Ctnnal1	intron	ENSMUSG00000038816	ProperStrand	18	chr11	100124645	100125879	protein_coding	Krt42	exon	ENSMUSG00000053654	ProperStrand	2	2	-inf
chr18	37908941	37908957	lincRNA	Gm16882	exon	ENSMUSG00000085906	ProperStrand	7	chr15	34370615	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-7.8301
chr5	23100257	23100276	protein_coding	Srpk2	intron	ENSMUSG00000062604	NonProperStrand	38	chr2	130102053	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-6.2554
chr11	116089055	116089235	protein_coding	Evpl	exon	ENSMUSG00000034282	ProperStrand	33	chr18	35716763	35716843	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-5.5364
chr2	90235299	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	21548752	21548768	protein_coding	Ldlr	exon	ENSMUSG00000032193	NonProperStrand	39	1	-5.2962
chr9	78023109	78023162	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr7	56803706	56803799	protein_coding	Nav2	utr3	ENSMUSG00000052512	ProperStrand	106	2	-7.8900
chr4	131865902	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr13	23391990	23392024	tRNA	tRNA97-ValCAC	.	320782	ProperStrand	52	1	-1.9942
chr5	136656790	136656806	protein_coding	Prkrip1	utr3	ENSMUSG00000039737	ProperStrand	52	chr1	42755254	42755270	protein_coding	Pou3f3	exon	ENSMUSG00000045515	NonProperStrand	117	1	-12.2604
chr3	95463322	95463695	protein_coding	Mcl1	exon	ENSMUSG00000038612	ProperStrand	75	chr1	162966210	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-7.1318
chr6	120389166	120389196	protein_coding	Kdm5a	exon	ENSMUSG00000030180	ProperStrand	57	chr10	23506278	23506320	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-7.0494
chr12	33638595	33638614	lincRNA	4933406C10Rik	exon	ENSMUSG00000086543	ProperStrand	52	chr3	108357386	108357486	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	8	-inf
chr4	79650831	79650859	pseudogene	Gm11410	.	ENSMUSG00000083219	NonProperStrand	1	chr8	98269959	98270084	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-inf
chr11	109257247	109257296	protein_coding	Gna13	exon	ENSMUSG00000020611	ProperStrand	23	chr7	134671402	134671492	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-9.8056
chr14	56824340	56824359	protein_coding	Gzmf	exon	ENSMUSG00000015441	ProperStrand	1	chr8	124907591	124907608	protein_coding	Zc3h18	exon	ENSMUSG00000017478	ProperStrand	55	1	-inf
chr7	139833256	139834171	protein_coding	Lhpp	exon	ENSMUSG00000030946	ProperStrand	35	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-12.7747
chr12	114290175	114290191	protein_coding	Pacs2	intron	ENSMUSG00000021143	NonProperStrand	302	chr15	34167896	34167921	protein_coding	Laptm4b	utr5	ENSMUSG00000022257	ProperStrand	24	1	-11.9290
chr2	6828367	6828386	protein_coding	Celf2	intron	ENSMUSG00000002107	NonProperStrand	26	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.8576
chrX	54644624	54644699	snoRNA	ENSMUSG00000065110_Snord61	.	ENSMUSG00000065110	ProperStrand	40	chr5	74489604	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	6	-inf
chr4	119941547	119941564	protein_coding	Foxo6	exon	ENSMUSG00000052135	ProperStrand	31	chr12	77679110	77679126	protein_coding	Plekhg3	exon	ENSMUSG00000052609	NonProperStrand	3	1	-inf
chr16	90084660	90084727	protein_coding	Tiam1	intron	ENSMUSG00000002489	ProperStrand	80	chr12	60141398	60141488	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-6.2602
chr8	72287171	72287187	protein_coding	Zfp866	utr3	ENSMUSG00000043090	NonProperStrand	134	chr2	130103749	130103825	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	3	-15.5107
chr17	15942297	15942387	protein_coding	Rgmb	utr3	ENSMUSG00000048027	ProperStrand	5	chr16	23110907	23110987	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr5	90714075	90714519	protein_coding	Ankrd17	exon	ENSMUSG00000055204	ProperStrand	77	chr15	79913288	79913346	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	3	-7.9453
chr11	69483195	69483312	protein_coding-noncoding	Eif4a1	utr3	ENSMUSG00000059796	ProperStrand	68	chr1	162965997	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	7	-19.6340
chr8	73419657	73419785	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	chr13	90238598	90238719	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	4	-1.3553
chr14	31815012	31815102	protein_coding	Glt8d1	utr5	ENSMUSG00000021916	ProperStrand	4	chr7	150717342	150717422	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-11.1357
chr1	37685245	37685262	protein_coding	2010300C02Rik	exon	ENSMUSG00000026090	NonProperStrand	8	chrX	131254216	131254258	protein_coding	Armcx1	utr5	ENSMUSG00000033460	ProperStrand	6	1	-18.5855
chr11	6428016	6428278	lincRNA	Gm11974	exon	ENSMUSG00000085156	ProperStrand	34	chr11	6428077	6428178	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	13	-20.2696
chr13	30338191	30338207	protein_coding	Mboat1	utr3	ENSMUSG00000038732	NonProperStrand	148	chr3	88497879	88497979	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-5.6779
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr11	77996575	77996624	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-0.7324
chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	chr11	62416575	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-3.6296
chr17	24856709	24856774	antisense	Snhg9	.	ENSMUSG00000090101	ProperStrand	218	chr6	50283214	50283231	protein_coding	Osbpl3	exon	ENSMUSG00000029822	NonProperStrand	31	1	-12.0601
chr3	86545462	86549780	protein_coding	Lrba	exon	ENSMUSG00000028080	ProperStrand	39	chr16	23111708	23111757	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.6215
chr1	72228190	72228288	protein_coding	Mreg	intron	ENSMUSG00000039395	ProperStrand	63	chr9	120038637	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	4	-10.2550
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr5	23825941	23825957	protein_coding	Kcnh2	exon	ENSMUSG00000038319	ProperStrand	242	1	-3.2537
chr7	151622875	151622944	protein_coding	Cttn	exon	ENSMUSG00000031078	ProperStrand	33	chr12	60141409	60141433	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-8.0247
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr13	76341035	76341055	protein_coding	Fam81b	intron	ENSMUSG00000078966	NonProperStrand	220	1	-6.3450
chr5	53236577	53236643	protein_coding	Anapc4	exon	ENSMUSG00000029176	ProperStrand	11	chr4	131865865	131865965	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.8470
chr9	15119629	15119714	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	chr11	58115972	58116002	tRNA	tRNA1911-LeuCAA	.	1461058	ProperStrand	165	1	-1.0740
chr10	61113852	61113876	protein_coding	Ppa1	intron	ENSMUSG00000020089	ProperStrand	30	chr16	23111373	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-4.1722
chr1	55135232	55135284	protein_coding	Hspd1	exon	ENSMUSG00000025980	ProperStrand	140	chr19	8963027	8963111	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.0167
chr9	15119287	15119413	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	7	-2.1435
chr11	62416605	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	chr7	106628100	106628200	snoRNA	ENSMUSG00000064966_Snord15b	.	ENSMUSG00000064966	ProperStrand	74	1	-4.7609
chr4	145740388	145740433	protein_coding	Gm13251	intron	ENSMUSG00000070605	ProperStrand	6	chr1	162966813	162966864	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-10.9912
chr12	110888916	110888956	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr8	32260335	32260387	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	7	-8.6871
chr13	12350141	12350159	protein_coding	Mtr	utr5	ENSMUSG00000021311	NonProperStrand	2	chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	1	-19.2741
chr15	25688505	25688544	protein_coding	Myo10	utr5	ENSMUSG00000022272	ProperStrand	168	chrX	34622906	34622942	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-1.4699
chr3	97570913	97570983	protein_coding	Pde4dip	exon	ENSMUSG00000038170	ProperStrand	25	chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	2	-16.5911
chr5	141090405	141090422	protein_coding	Lfng	exon	ENSMUSG00000029570	NonProperStrand	92	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-8.0717
chr17	69766399	69766499	lincRNA	A930029G22Rik	exon	ENSMUSG00000085144	ProperStrand	3	chr7	118219574	118219621	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-10.4323
chr7	30946450	30946550	protein_coding	Zfp146	utr3	ENSMUSG00000037029	ProperStrand	6	chr10	23505552	23505618	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-12.3000
chr2	90235284	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	106873373	106873390	protein_coding	Tmem59	utr3	ENSMUSG00000028618	NonProperStrand	9	1	-8.2671
chr16	96344016	96346369	protein_coding	Hmgn1	exon	ENSMUSG00000040681	ProperStrand	38	chr11	97642982	97643072	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-5.6371
chr7	16534823	16534839	protein_coding	Ehd2	utr3	ENSMUSG00000074364	NonProperStrand	197	chr18	73693110	73693134	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-3.2736
chr11	97642952	97643072	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	chr7	134671387	134671519	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	10	-2.0862
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr18	33954814	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-2.2399
chr19	53406810	53406826	protein_coding	Mxi1	intron	ENSMUSG00000025025	ProperStrand	51	chr4	15193354	15193381	protein_coding	Tmem64	exon	ENSMUSG00000043252	ProperStrand	32	1	-14.9224
chr9	96980682	96980772	protein_coding	Slc25a36	exon	ENSMUSG00000032449	ProperStrand	159	chr14	33005093	33005173	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-2.2545
chr3	137849424	137849440	protein_coding	4930579F01Rik	utr5	ENSMUSG00000012042	NonProperStrand	156	chr2	130101259	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-4.7266
chr15	75832741	75832841	protein_coding	Fam83h	exon	ENSMUSG00000046761	ProperStrand	10	chr10	23505152	23505215	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.3364
chr5	119212940	119213007	protein_coding	Med13l	utr3	ENSMUSG00000018076	ProperStrand	226	chr15	98350185	98350285	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-2.3433
chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr19	8799024	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	4	-2.2558
chr1	108068495	108068514	protein_coding	Phlpp1	utr5	ENSMUSG00000044340	ProperStrand	67	chr5	115940308	115940408	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	1	-8.5148
chrX	156568148	156570013	protein_coding	Pdha1	exon	ENSMUSG00000031299	ProperStrand	27	chrX	133268955	133269028	protein_coding	Morf4l2	utr5	ENSMUSG00000031422	ProperStrand	113	3	-inf
chr6	137347956	137347974	protein_coding	Ptpro	intron	ENSMUSG00000030223	NonProperStrand	13	chr15	34370631	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-6.5354
chr11	98544177	98544246	protein_coding	Psmd3	exon	ENSMUSG00000017221	ProperStrand	51	chr16	23111474	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.4898
chr19	6011126	6011142	protein_coding	Capn1	exon	ENSMUSG00000024942	ProperStrand	22	chr16	23110455	23110489	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.2978
chr13	58495679	58495715	protein_coding	Hnrnpk	exon	ENSMUSG00000021546	ProperStrand	117	chr7	116664854	116664924	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.4810
chrX	83437137	83437153	protein_coding	Nr0b1	utr5	ENSMUSG00000025056	ProperStrand	37	chr4	131908243	131908297	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.1700
chr11	6315954	6318115	protein_coding	Ppia	exon	ENSMUSG00000071866	ProperStrand	127	chr7	116663633	116663679	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.3331
chr5	117835404	117835467	protein_coding	Rfc5	exon	ENSMUSG00000029363	ProperStrand	15	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-7.9821
chr13	9833553	9833617	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr2	162898596	162909061	protein_coding	Mybl2	utr3	ENSMUSG00000017861	ProperStrand	230	3	-6.5319
chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	chr11	67167096	67167112	protein_coding	Myh13	exon	ENSMUSG00000060180	ProperStrand	145	1	-9.9149
chr2	90235287	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	6	-7.6380
chr19	46446702	46446741	protein_coding	Tmem180	exon	ENSMUSG00000025227	ProperStrand	20	chr2	79843543	79843559	protein_coding	Pde1a	intron	ENSMUSG00000059173	NonProperStrand	275	1	-12.4901
chr16	15636872	15637240	protein_coding	Mcm4	exon	ENSMUSG00000022673	ProperStrand	51	chr3	152450610	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	2	-14.4778
chr14	73766143	73766228	protein_coding	Itm2b	exon	ENSMUSG00000022108	ProperStrand	25	chr19	8800394	8800484	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-5.2030
chr16	64941129	64941146	protein_coding	Htr1f	intron	ENSMUSG00000050783	ProperStrand	4	chr4	116828379	116828451	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	2	-inf
chr7	103398046	103398146	protein_coding	Odz4	intron	ENSMUSG00000048078	NonProperStrand	15	chr11	69483247	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	NonProperStrand	35	1	-17.3028
chr10	70718556	70718581	protein_coding	Ube2d1	utr3	ENSMUSG00000019927	ProperStrand	9	chr8	25920545	25921169	protein_coding	Adam5	exon	ENSMUSG00000031554	ProperStrand	49	1	-17.5984
chr12	76767317	76767387	protein_coding	Wdr89	intron	ENSMUSG00000045690	ProperStrand	7	chr10	110918546	110918636	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-7.7211
chr17	29387873	29387920	protein_coding	Ppil1	utr3	ENSMUSG00000024007	ProperStrand	17	chr9	120037979	120038027	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	4	-21.0952
chr12	21297662	21299126	protein_coding	Cpsf3	exon	ENSMUSG00000054309	ProperStrand	24	chr16	23111384	23111474	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.7195
chr14	118894808	119030353	protein_coding	Abcc4	intron	ENSMUSG00000032849	ProperStrand	137	chr16	23111377	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-0.8382
chr8	32239595	32239611	protein_coding	Rnf122	utr3	ENSMUSG00000039328	NonProperStrand	42	chr7	118219574	118219638	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-4.8539
chr12	88062328	88062804	protein_coding	Angel1	exon	ENSMUSG00000021257	NonProperStrand	1	chr18	35714145	35714243	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-inf
chr1	152268927	152269668	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	chr4	40800795	40800812	protein_coding	B4galt1	exon	ENSMUSG00000028413	ProperStrand	25	1	-10.6766
chr1	71643913	71667311	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr18	35714143	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	7	-2.6259
chr18	34458203	34458293	protein_coding	Apc	exon	ENSMUSG00000005871	ProperStrand	64	chr17	24857763	24857843	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.1895
chr12	88778631	88778731	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	chr7	52382754	52382831	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-0.8066
chr9	50816824	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-6.6684
chr11	3649570	3649587	protein_coding	Osbp2	intron	ENSMUSG00000020435	ProperStrand	60	chr16	38158133	38158226	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	1	-8.6503
chr7	20296102	20300394	protein_coding	Tomm40	exon	ENSMUSG00000002984	ProperStrand	57	chr16	23110891	23110963	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-3.5366
chr2	121255234	121255277	protein_coding	Pdia3	exon	ENSMUSG00000027248	ProperStrand	74	chr5	114550604	114550623	protein_coding	Usp30	intron	ENSMUSG00000029592	NonProperStrand	3	1	-inf
chr3	79401579	79401607	protein_coding-noncoding	Ppid	utr5	ENSMUSG00000027804	ProperStrand	1	chr8	3568023	3568039	protein_coding	C330021F23Rik	utr5	ENSMUSG00000065952	NonProperStrand	85	1	-inf
chr19	24610060	24610150	protein_coding	Pip5k1b	intron	ENSMUSG00000024867	NonProperStrand	40	chr19	24598275	24598355	protein_coding	Pip5k1b	intron	ENSMUSG00000024867	ProperStrand	7	1	-18.4813
chr8	94047007	94047072	protein_coding-noncoding	Fto	utr5	ENSMUSG00000055932	ProperStrand	2	chr19	53461017	53461034	protein_coding	Smndc1	intron	ENSMUSG00000025024	NonProperStrand	12	1	-inf
chr11	6428098	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	NonProperStrand	91	chr2	130101278	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	NonProperStrand	4	1	-18.1417
chr1	155287326	155287354	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	chr11	69480694	69480794	protein_coding	Eif4a1	utr3	ENSMUSG00000059796	ProperStrand	108	1	-7.8047
chr11	51414967	51416121	protein_coding	Hnrnpab	exon	ENSMUSG00000020358	ProperStrand	124	chr11	69481335	69481427	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-1.9576
chr6	67217321	67221209	protein_coding	Serbp1	exon	ENSMUSG00000036371	ProperStrand	261	chr7	150717298	150717356	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-2.7582
chr19	10270802	10270851	protein_coding	Fads1	utr3	ENSMUSG00000010663	ProperStrand	21	chr5	31504368	31504386	protein_coding	Zfp513	utr5	ENSMUSG00000043059	ProperStrand	16	2	-inf
chr11	62416575	62416627	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	NonProperStrand	13	chr1	9932550	9932601	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	NonProperStrand	2	1	-inf
chr1	78485413	78485430	protein_coding	Farsb	utr5	ENSMUSG00000026245	NonProperStrand	3	chr9	120038495	120038552	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-9.2011
chr12	88032915	88032981	protein_coding	Vash1	utr3	ENSMUSG00000021256	ProperStrand	12	chr2	158575577	158575594	protein_coding	Ppp1r16b	intron	ENSMUSG00000037754	NonProperStrand	5	1	-19.3297
chr2	4829164	4829180	protein_coding	Sephs1	utr3	ENSMUSG00000026662	NonProperStrand	271	chr11	72730046	72730062	protein_coding	Zzef1	exon	ENSMUSG00000055670	NonProperStrand	16	1	-12.9776
chr8	45328864	45328911	LINE	L1Md_Gf	L1	chr8L1Md_Gf45328293	ProperStrand	1	chr2	53003875	53003891	protein_coding	Prpf40a	exon	ENSMUSG00000061136	ProperStrand	129	1	-inf
chr5	24379817	24381019	protein_coding	Prkag2	exon	ENSMUSG00000028944	ProperStrand	6	chr16	23110902	23111002	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.7876
chr5	66370411	66370501	LTR	MLT1D	MaLR	chr5MLT1D66370329	NonProperStrand	1	chr5	66370565	66370645	LTR	MLT1D	MaLR	chr5MLT1D66370512	NonProperStrand	1	1	-inf
chr3	76969676	76969756	DNA	URR1B	MER1_type	chr3URR1B76969637	NonProperStrand	1	chr3	76969520	76969610	SINE	B4A	B4	chr3B4A76969492	NonProperStrand	1	1	-inf
chrX	137005804	137005864	protein_coding	Prps1	intron	ENSMUSG00000031432	ProperStrand	17	chr16	23110986	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.8783
chr14	105559740	105559756	protein_coding	Rbm26	exon	ENSMUSG00000022119	ProperStrand	60	chr4	118808394	118808444	protein_coding	Slc2a1	exon	ENSMUSG00000028645	ProperStrand	361	1	-9.7183
chr1	185475688	185475778	LINE	L1M2	L1	chr1L1M2185475690	ProperStrand	1	chr1	185475483	185475563	SINE	B3	B2	chr1B3185475480	ProperStrand	1	1	-inf
chr16	62900542	62900560	protein_coding	Pros1	intron	ENSMUSG00000022912	ProperStrand	20	chr5	121655015	121655126	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-9.6247
chr11	76613382	76613401	protein_coding	Cpd	exon	ENSMUSG00000020841	ProperStrand	46	chr15	5068428	5068480	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	4	-inf
chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	chr3	30922091	30922169	protein_coding	Prkci	intron	ENSMUSG00000037643	ProperStrand	39	1	-10.2651
chr5	137441799	137441847	protein_coding	Fis1	exon	ENSMUSG00000019054	ProperStrand	12	chr17	12860706	12860722	protein_coding	Slc22a1	intron	ENSMUSG00000023829	NonProperStrand	11	1	-19.9991
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr9	88397070	88397087	LTR	ORR1A3-int	MaLR	chr9ORR1A3-int88396340	ProperStrand	6	1	-12.5473
chr8	108233711	108233729	protein_coding	4933405L10Rik	exon	ENSMUSG00000013158	ProperStrand	94	chr17	35646139	35646402	protein_coding	Pou5f1	exon	ENSMUSG00000024406	ProperStrand	104	3	-inf
chr10	25199562	25204104	protein_coding	Epb4.1l2	utr5	ENSMUSG00000019978	ProperStrand	105	chr7	118219574	118219601	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-3.1362
chr9	65049532	65049593	snRNA	ENSMUSG00000075930_U5	.	ENSMUSG00000075930	ProperStrand	175	chr16	23111778	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-1.1372
chr4	122970394	122970484	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	chr18	74938223	74938303	snoRNA	ENSMUSG00000089235_SCARNA17	.	ENSMUSG00000089235	ProperStrand	1128	10	-20.2816
chr4	131908236	131908357	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	chr8	113362430	113362489	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	7	-0.8772
chr10	79203030	79203047	protein_coding	Polrmt	exon	ENSMUSG00000020329	ProperStrand	11	chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	2	-19.8990
chr9	15119990	15120036	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	chr2	26766780	26766855	snoRNA	ENSMUSG00000065258_SNORD24	.	ENSMUSG00000065258	ProperStrand	130	2	-9.3350
chrX	97849736	97849785	protein_coding	Kif4	intron	ENSMUSG00000034311	ProperStrand	24	chr17	71998236	71998336	protein_coding	Wdr43	intron	ENSMUSG00000041057	ProperStrand	70	1	-14.8702
chr1	60146113	60146166	protein_coding	Wdr12	exon	ENSMUSG00000026019	ProperStrand	36	chr1	162965981	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-7.6102
chr7	20526640	20526657	protein_coding	2210010C17Rik	intron	ENSMUSG00000040498	NonProperStrand	18	chr6	125080125	125080181	protein_coding	Chd4	utr3	ENSMUSG00000063870	ProperStrand	303	1	-12.5115
chr9	114473100	114473192	protein_coding	Trim71	utr5	ENSMUSG00000079259	ProperStrand	162	chr4	41150096	41150132	snoRNA	ENSMUSG00000089265_SNORD121A	.	ENSMUSG00000089265	ProperStrand	370	5	-19.7062
chr19	30969167	30969184	protein_coding	Prkg1	exon	ENSMUSG00000052920	NonProperStrand	41	chr4	131908689	131908789	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.7814
chrX	72214248	72214264	protein_coding-noncoding	Gab3	utr3	ENSMUSG00000032750	ProperStrand	420	chr2	153036051	153036068	protein_coding	Tm9sf4	utr3	ENSMUSG00000068040	ProperStrand	27	1	-11.0296
chr2	146125207	146125226	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	chr5	130295428	130295546	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	6	-16.7126
chr9	40611878	40612276	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr8	98269959	98270094	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	4	-4.7916
chr11	19913936	19913990	protein_coding	Spred2	intron	ENSMUSG00000045671	ProperStrand	106	chr7	116664794	116664884	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.6270
chr5	28404088	28404188	protein_coding	Insig1	utr3	ENSMUSG00000045294	ProperStrand	35	chr13	8766290	8766308	protein_coding	Adarb2	utr3	ENSMUSG00000052551	ProperStrand	292	8	-18.9475
chr15	44509114	44509131	protein_coding	Sybu	exon	ENSMUSG00000022340	NonProperStrand	28	chr7	54110932	54110955	protein_coding	Ldha	utr3	ENSMUSG00000063229	ProperStrand	280	1	-11.7664
chr3	96218383	96218473	misc_RNA	Telomerase-vert	.	ENSMUSG00000064796	ProperStrand	443	chr1	187230936	187230987	protein_coding	Eprs	exon	ENSMUSG00000026615	ProperStrand	149	6	-inf
mmu-miR-712-3p	1	22	miRNA	mmu-miR-712-3p	.	mmu-miR-712-3p	ProperStrand	2	chr5	74489542	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-11.1084
chr5	123908083	123908104	protein_coding	Mlxip	intron	ENSMUSG00000038342	ProperStrand	21	chr11	109224498	109226850	protein_coding	Gm11696	exon	ENSMUSG00000056687	ProperStrand	7	1	-21.4650
chr1	88203631	88203686	protein_coding	B3gnt7	utr3	ENSMUSG00000079445	ProperStrand	13	chr7	116664872	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-12.9541
chr7	130335052	130335068	protein_coding	Tnrc6a	exon	ENSMUSG00000052707	ProperStrand	37	chr18	35716809	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-5.2115
chr7	119260153	119260202	protein_coding	Dkk3	utr3	ENSMUSG00000030772	ProperStrand	7	chr4	131865856	131865946	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	5	-21.6852
chr9	58732311	58732382	protein_coding	Neo1	exon	ENSMUSG00000032340	ProperStrand	35	chr18	33954845	33954935	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-4.5220
chr2	121176333	121176349	protein_coding	Ppip5k1	exon	ENSMUSG00000033526	ProperStrand	85	chr18	35716786	35716831	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.6197
chr1	71341492	71341509	protein_coding	Abca12	exon	ENSMUSG00000050296	NonProperStrand	143	chr10	110918547	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	5	-9.7016
chr2	111667903	111667993	LINE	L1_Mur3	L1	chr2L1_Mur3111667823	NonProperStrand	1	chr2	111668008	111668098	LINE	Lx5	L1	chr2Lx5111668013	ProperStrand	1	1	-inf
chr9	105552938	105553011	protein_coding	Pik3r4	exon	ENSMUSG00000032571	ProperStrand	49	chr10	23505169	23505259	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.5211
chr10	20080843	20080860	protein_coding	Fam54a	utr3	ENSMUSG00000019992	ProperStrand	232	chr9	120039533	120039622	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.1368
chr16	13725223	13725283	protein_coding	Pla2g10	exon	ENSMUSG00000022683	ProperStrand	6	chr16	23110558	23110581	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-11.4714
chr16	34963714	34963734	protein_coding	Mylk	exon	ENSMUSG00000022836	ProperStrand	19	chr3	121160458	121160573	protein_coding	Cnn3	utr3	ENSMUSG00000053931	ProperStrand	77	1	-15.1503
chr9	61257201	61260112	protein_coding	Tle3	exon	ENSMUSG00000032280	ProperStrand	88	chr1	162967505	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	8	-19.5127
chr11	88877623	88877667	protein_coding	Trim25	exon	ENSMUSG00000000275	ProperStrand	50	chr7	27974415	27974463	protein_coding	Snrpa	exon	ENSMUSG00000061479	ProperStrand	56	1	-13.8200
chr5	134723090	134725754	protein_coding	Gtf2i	exon	ENSMUSG00000060261	ProperStrand	41	chr18	35716810	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.8214
chr8	72287172	72287189	protein_coding	Zfp866	utr3	ENSMUSG00000043090	NonProperStrand	134	chr16	23110831	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	9	-2.9931
chr7	86591618	86591698	protein_coding	Fanci	intron	ENSMUSG00000039187	NonProperStrand	6	chr9	15119646	15119736	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-11.7637
chr7	112782969	112782985	protein_coding	Arfip2	utr3	ENSMUSG00000030881	ProperStrand	191	chr5	142936195	142936244	protein_coding	Foxk1	utr3	ENSMUSG00000056493	ProperStrand	19	1	-13.3222
chr7	106630824	106631139	protein_coding	Rps3	exon	ENSMUSG00000030744	ProperStrand	159	chr15	82980154	82980227	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-5.2241
chr7	108027534	108027989	protein_coding	Arhgef17	exon	ENSMUSG00000032875	ProperStrand	33	chr16	23110924	23110957	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.9284
chrX	93361998	93362098	protein_coding	Msn	utr3	ENSMUSG00000031207	ProperStrand	71	chr19	8800085	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-7.2727
chr5	77697712	77697812	protein_coding	Rest	exon	ENSMUSG00000029249	ProperStrand	136	chr4	131908687	131908740	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-0.8115
chr8	94577899	94577989	LINE	Lx8	L1	chr8Lx894577556	NonProperStrand	2	chr6	37512983	37513063	protein_coding	Akr1d1	intron	ENSMUSG00000038641	ProperStrand	3	1	-inf
chr11	113513363	113513379	protein_coding	Cog1	exon	ENSMUSG00000018661	NonProperStrand	38	chr11	6305004	6305046	protein_coding	Zmiz2	exon	ENSMUSG00000041164	ProperStrand	69	1	-13.9562
chr2	51938265	51961049	protein_coding	Rif1	exon	ENSMUSG00000036202	ProperStrand	201	chr19	8800356	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	4	-6.1361
chr18	32263317	32263333	protein_coding	Iws1	utr3	ENSMUSG00000024384	ProperStrand	72	chr11	77996579	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-5.7337
chr5	65779816	65779887	protein_coding	Rpl9	exon	ENSMUSG00000047215	ProperStrand	113	chr11	97642952	97643007	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-2.7537
chr16	96259329	96303441	protein_coding	Brwd1	intron	ENSMUSG00000022914	ProperStrand	77	chr16	23110827	23110960	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-0.9422
chr15	76180421	76180439	protein_coding-noncoding	Sharpin	utr3	ENSMUSG00000022552	ProperStrand	2	chr3	123210854	123210979	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-inf
chr15	82828214	82828294	protein_coding	Nfam1	utr3	ENSMUSG00000058099	NonProperStrand	4	chr15	82829468	82829558	protein_coding	Nfam1	utr3	ENSMUSG00000058099	ProperStrand	3	1	-inf
chrX	134975013	134975029	protein_coding	Il1rapl2	intron	ENSMUSG00000059203	NonProperStrand	23	chr16	23110529	23110558	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.2122
chr19	47718709	47718783	protein_coding	Slk	utr3	ENSMUSG00000025060	ProperStrand	27	chr19	8800355	8800445	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-5.0518
chr1	180885279	180885295	protein_coding	Smyd3	utr3	ENSMUSG00000055067	NonProperStrand	190	chr4	116826699	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-4.5344
chr13	9833580	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr18	44581366	44581423	protein_coding	Dcp2	utr3	ENSMUSG00000024472	ProperStrand	44	1	-5.5589
chr4	129662259	129662276	protein_coding	Bai2	utr5	ENSMUSG00000028782	ProperStrand	119	chr2	154702396	154703494	protein_coding	Eif2s2	exon	ENSMUSG00000074656	ProperStrand	96	2	-17.2109
chrX	71516624	71516647	protein_coding-noncoding	Rpl10	utr5	ENSMUSG00000008682	ProperStrand	4	chr14	33005065	33005139	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	3	-19.4020
chr19	10693543	10693571	protein_coding	Ddb1	exon	ENSMUSG00000024740	ProperStrand	304	chr19	27837820	27837836	protein_coding	Rfx3	utr3	ENSMUSG00000040929	ProperStrand	92	1	-9.2040
chrX	93362793	93362843	protein_coding	Msn	utr3	ENSMUSG00000031207	NonProperStrand	2	chr5	74489629	74489676	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	NonProperStrand	5	1	-21.6030
chr10	128257530	128257546	protein_coding	Ormdl2	utr5	ENSMUSG00000025353	ProperStrand	51	chr2	26493406	26493484	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-4.0473
chr2	147011593	147011610	protein_coding	Nkx2-2	exon	ENSMUSG00000027434	ProperStrand	47	chr4	149098852	149098870	protein_coding	Tmem201	intron	ENSMUSG00000044700	ProperStrand	60	1	-13.8108
chr9	102622568	102622668	protein_coding	Amotl2	exon	ENSMUSG00000032531	ProperStrand	54	chr2	130103455	130103500	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	4	-inf
chr8	109535648	109535665	protein_coding	Sntb2	utr3	ENSMUSG00000041308	ProperStrand	41	chr13	51743584	51743703	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	3	-17.1691
chr11	33470442	33470542	protein_coding	Gabrp	intron	ENSMUSG00000020159	NonProperStrand	11	chr9	15118351	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-6.7899
chr13	67466003	67466019	protein_coding	Zfp456	utr3	ENSMUSG00000078995	NonProperStrand	2	chr11	62416601	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-12.5746
chr2	90235295	90235345	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr12	103604268	103604285	protein_coding	Rin3	intron	ENSMUSG00000044456	ProperStrand	26	1	-6.0972
chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	chr11	102294590	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	1	-5.0817
chr9	65127126	65127142	protein_coding	Cilp	exon	ENSMUSG00000042254	ProperStrand	212	chrX	71517832	71517909	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-4.1009
chr4	104144550	104144567	protein_coding	Dab1	intron	ENSMUSG00000028519	NonProperStrand	26	chr8	73419683	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.7022
chr11	6519870	6519944	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	chr11	77994800	77994826	snoRNA	ENSMUSG00000064540_Snord42a	.	ENSMUSG00000064540	ProperStrand	142	1	-6.2345
chr14	78989773	78995028	protein_coding	Dgkh	exon	ENSMUSG00000034731	ProperStrand	29	chr5	130300442	130300522	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.8234
chrX	163749583	163749605	protein_coding	Tlr7	intron	ENSMUSG00000044583	ProperStrand	1	chr4	56910496	56910567	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-inf
chr2	25200869	25200952	protein_coding	Man1b1	intron	ENSMUSG00000036646	ProperStrand	57	chr4	131865901	131865977	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.8480
chr1	155102481	155105250	protein_coding	Lamc1	exon	ENSMUSG00000026478	ProperStrand	239	chr9	83674172	83674253	protein_coding	Elovl4	exon	ENSMUSG00000032262	ProperStrand	159	1	-8.5905
chr19	8799193	8799252	lincRNA	Snhg1	exon	ENSMUSG00000090867	ProperStrand	100	chr6	148772999	148779777	protein_coding	Ipo8	utr5	ENSMUSG00000040029	ProperStrand	22	1	-14.3254
chr5	137814899	137814969	protein_coding	Ephb4	utr3	ENSMUSG00000029710	ProperStrand	49	chr11	68887040	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-4.5298
chr18	56867487	56867504	protein_coding	Lmnb1	utr5	ENSMUSG00000024590	NonProperStrand	5	chr11	50171597	50171615	protein_coding	Cby3	intron	ENSMUSG00000050087	NonProperStrand	1	1	-inf
chr1	20988067	20988147	protein_coding	Tram2	utr3	ENSMUSG00000041779	ProperStrand	13	chr17	39985672	39985762	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-9.0150
chr12	17290779	17290869	protein_coding	Pdia6	utr3	ENSMUSG00000020571	ProperStrand	114	chr11	83107808	83107888	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	1	-7.5547
chr19	41992201	41992221	protein_coding	Pgam1	exon	ENSMUSG00000011752	ProperStrand	124	chr12	100626727	100626743	protein_coding	Foxn3	exon	ENSMUSG00000033713	ProperStrand	74	1	-11.4342
chr4	132048486	132048543	protein_coding	Sesn2	utr3	ENSMUSG00000028893	ProperStrand	75	chr19	25499353	25499373	protein_coding	Kank1	intron	ENSMUSG00000032702	NonProperStrand	8	1	-16.9858
chr4	135427103	135427155	protein_coding	Pnrc2	utr3	ENSMUSG00000028675	ProperStrand	2	chr2	158182156	158182238	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-12.4042
chr13	24527019	24527035	protein_coding	Cmah	exon	ENSMUSG00000016756	ProperStrand	5	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-12.3847
chr7	24779190	24779213	SINE	ID_B1	B4	chr7ID_B124779183	NonProperStrand	54	chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	1	-8.1852
chr8	98269966	98270035	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	chr5	111121066	111121149	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	7	-4.6281
chr12	106018960	106019050	protein_coding	Clmn	exon	ENSMUSG00000021097	ProperStrand	50	chr7	116663634	116663714	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.8291
chr11	6428039	6428171	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr18	33954815	33954950	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	89	-19.0238
chr2	71362962	71362979	antisense	Dlx1as	.	ENSMUSG00000084946	ProperStrand	7	chr9	120037898	120037968	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-9.0569
chr4	43505656	43505687	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr18	35091312	35091551	protein_coding	Etf1	utr5	ENSMUSG00000024360	ProperStrand	74	1	-2.6994
chr5	35438660	35440215	protein_coding	Lrpap1	exon	ENSMUSG00000029103	ProperStrand	43	chr7	148634722	148634812	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-4.6204
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr6	38461893	38461909	protein_coding	Ubn2	utr3	ENSMUSG00000038538	ProperStrand	86	1	-6.2125
chr11	45723144	45723160	protein_coding	Clint1	utr3	ENSMUSG00000006169	NonProperStrand	273	chr7	117189862	117189922	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-3.3181
chr9	91382155	91382245	LINE	Lx6	L1	chr9Lx691382026	NonProperStrand	1	chr1	68329910	68329990	protein_coding	Erbb4	intron	ENSMUSG00000062209	ProperStrand	8	1	-inf
chr12	70259651	70259709	protein_coding	Rps29	exon	ENSMUSG00000034892	ProperStrand	124	chr10	95499367	95499383	protein_coding	Eea1	utr3	ENSMUSG00000036499	ProperStrand	82	1	-11.2277
chr6	31685528	31685549	lincRNA	Gm13847	intron	ENSMUSG00000086804	NonProperStrand	5	chr5	121655099	121655153	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-14.3187
chr6	115757991	115758119	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr2	26768370	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	4	-0.7188
chr1	173271558	173271658	protein_coding	Dedd	utr3	ENSMUSG00000013973	ProperStrand	17	chr10	88193348	88193366	pseudogene	Gm4925	.	ENSMUSG00000069540	ProperStrand	2	2	-inf
chr2	13500368	13501075	protein_coding	Vim	exon	ENSMUSG00000026728	ProperStrand	33	chr15	34370545	34370641	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-4.6811
chr5	34234244	34234262	protein_coding	Whsc1	utr5	ENSMUSG00000057406	ProperStrand	409	chr5	108336377	108336410	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-1.5085
chr3	23326181	23326197	LTR	RLTR9D	ERVK	chr3RLTR9D23325954	ProperStrand	21	chr8	73419730	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-5.1207
chr19	60013131	60013148	protein_coding	Rab11fip2	exon	ENSMUSG00000040022	ProperStrand	35	chr18	35714143	35714254	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.4569
chr11	79350295	79350318	protein_coding	Nf1	exon	ENSMUSG00000020716	ProperStrand	42	chr15	77597977	77597993	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	1	-9.5251
chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	chr11	98878343	98878371	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-2.6871
chr4	17758080	17758170	LINE	L1_Mus2	L1	chr4L1_Mus217758038	ProperStrand	1	chr4	17758198	17758288	SINE	B1_Mm	Alu	chr4B1_Mm17758144	ProperStrand	1	1	-inf
chr11	98707566	98708442	protein_coding	Rapgefl1	exon	ENSMUSG00000038020	ProperStrand	3	chr4	131865892	131865972	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.6896
chr18	80637783	80637819	protein_coding	Ctdp1	intron	ENSMUSG00000033323	ProperStrand	69	chr16	23110475	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.2265
chr15	75692859	75692876	protein_coding	Gsdmd	utr5	ENSMUSG00000022575	NonProperStrand	5	chr6	143048472	143048538	protein_coding	5730419I09Rik	utr5	ENSMUSG00000030279	ProperStrand	81	1	-17.7110
chr17	47604805	47604821	protein_coding	AI661453	exon	ENSMUSG00000034382	NonProperStrand	38	chr4	131865856	131865891	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.5179
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr14	79480937	79480956	protein_coding	1300010F03Rik	exon	ENSMUSG00000058997	NonProperStrand	10	1	-11.6319
chr12	110925009	110925063	snoRNA	ENSMUSG00000064726_SNORD113	.	ENSMUSG00000064726	ProperStrand	42	chrX	34622906	34623008	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-3.8283
chr7	28099289	28099379	protein_coding	Ltbp4	exon	ENSMUSG00000040488	ProperStrand	91	chr7	116663641	116663721	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.8277
chr11	69754862	69754920	protein_coding	Ybx2	utr3	ENSMUSG00000018554	ProperStrand	17	chr4	131908356	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	7	-inf
chr8	125095901	125096860	protein_coding	Cdt1	utr3	ENSMUSG00000006585	ProperStrand	47	chr9	120039533	120039626	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	3	-9.2938
chr2	129998667	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr17	13115738	13115784	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	3	-6.7372
chr13	48981163	48981198	protein_coding	Fam120a	exon	ENSMUSG00000038014	ProperStrand	76	chr18	82750728	82750773	protein_coding	Mbp	intron	ENSMUSG00000041607	ProperStrand	11	2	-20.9343
chr1	193445267	193445301	protein_coding	Ints7	exon	ENSMUSG00000037461	ProperStrand	108	chr19	5666668	5666684	protein_coding	Pcnxl3	exon	ENSMUSG00000054874	ProperStrand	96	1	-11.1880
chr7	123494388	123495356	protein_coding	Pik3c2a	exon	ENSMUSG00000030660	ProperStrand	2	chr9	120038003	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-12.0930
chr9	64333077	64333098	protein_coding	Megf11	intron	ENSMUSG00000036466	NonProperStrand	64	chr7	29136525	29136600	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.2567
chr2	71693944	71693982	protein_coding	Itga6	exon	ENSMUSG00000027111	ProperStrand	54	chr11	62416615	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-5.3715
chr17	27559700	27559717	protein_coding	Grm4	utr3	ENSMUSG00000063239	ProperStrand	147	chr4	131908236	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-0.9027
chrX	103397883	103397948	protein_coding	Pgk1	exon	ENSMUSG00000062070	ProperStrand	484	chr4	131865454	131865515	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-0.7032
chr6	143429775	143429792	LINE	L1MA4	L1	chr6L1MA4143429728	ProperStrand	39	chr17	35142525	35147528	protein_coding	Vars	exon	ENSMUSG00000007029	ProperStrand	121	4	-18.7314
chr9	64982385	64982951	protein_coding	Igdcc4	exon	ENSMUSG00000032816	ProperStrand	29	chr17	24857806	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	4	-12.0862
chr7	16534823	16534840	protein_coding	Ehd2	utr3	ENSMUSG00000074364	NonProperStrand	197	chr2	26493367	26493506	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-3.1260
chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr14	52829478	52829570	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	3	-7.5192
chr7	11638144	11638160	LINE	Lx3_Mus	L1	chr7Lx3_Mus11638025	ProperStrand	3	chr16	23110931	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr17	26332470	26332550	protein_coding	Axin1	utr3	ENSMUSG00000024182	ProperStrand	28	chr8	73419683	73419773	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.5584
chr5	110864970	110864995	protein_coding	Fbrsl1	intron	ENSMUSG00000043323	ProperStrand	131	chr10	107800796	107800851	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	2	-10.5308
chr3	130946183	130947361	protein_coding	Hadh	intron	ENSMUSG00000027984	ProperStrand	35	chr16	23110911	23111005	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.7567
chr1	173433177	173433222	protein_coding	B930036N10Rik	utr3	ENSMUSG00000091993	ProperStrand	150	chr12	55797776	55797866	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	1	-5.8852
chr9	120038467	120038494	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	chr16	87419202	87419292	snoRNA	ENSMUSG00000065647_SNORA2	.	ENSMUSG00000065647	ProperStrand	123	1	-1.8283
chr6	124885267	124885314	protein_coding	Mlf2	exon	ENSMUSG00000030120	ProperStrand	80	chr8	32260335	32260369	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	2	-6.8465
chr8	13416897	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr12	99756958	99756975	protein_coding	Kcnk10	exon	ENSMUSG00000033854	NonProperStrand	37	1	-7.4170
chr10	80367649	80367720	protein_coding	Lmnb2	exon	ENSMUSG00000062075	ProperStrand	14	chrX	34622991	34623037	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	5	-inf
chr6	93104401	93104418	lincRNA	9530026P05Rik	intron	ENSMUSG00000087573	NonProperStrand	5	chr16	23110828	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr5	89664942	89664958	protein_coding	Slc4a4	utr3	ENSMUSG00000060961	NonProperStrand	195	chr9	120039533	120039614	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.3737
chr2	30031210	30031267	protein_coding-noncoding	D2Wsu81e	utr3	ENSMUSG00000039660	ProperStrand	1	chr10	38781241	38785410	protein_coding	Lama4	exon	ENSMUSG00000019846	ProperStrand	3	1	-inf
chr9	53402563	53402850	protein_coding	Acat1	exon	ENSMUSG00000032047	ProperStrand	13	chr19	8799835	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-8.0039
chr1	88253582	88253672	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chr2	119927829	119927909	protein_coding	Ehd4	exon	ENSMUSG00000027293	ProperStrand	7	1	-11.7699
chr9	72591392	72591428	protein_coding	Nedd4	exon	ENSMUSG00000032216	ProperStrand	308	chr9	87600769	87602606	protein_coding	Tbx18	exon	ENSMUSG00000032419	ProperStrand	19	1	-12.3675
chr2	32818857	32818939	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	chr7	52382236	52382314	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-1.1082
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	86138158	86138174	protein_coding	Olfr1052	exon	ENSMUSG00000047149	NonProperStrand	119	2	-5.4693
chr8	13418750	13418766	protein_coding	Grk1	utr3	ENSMUSG00000031450	NonProperStrand	12	chr4	135327523	135329683	protein_coding	Myom3	exon	ENSMUSG00000037139	NonProperStrand	62	1	-16.5329
chr2	158683370	158683441	protein_coding	Dhx35	utr3	ENSMUSG00000027655	ProperStrand	37	chr16	23111458	23111505	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.9851
chr3	128921631	128921649	protein_coding	Pitx2	exon	ENSMUSG00000028023	NonProperStrand	6	chr3	95024063	95024122	protein_coding	Mllt11	utr3	ENSMUSG00000053192	ProperStrand	6	1	-18.9143
chrX	130496426	130496668	protein_coding	Sytl4	exon	ENSMUSG00000031255	ProperStrand	169	chr18	36841881	36841941	protein_coding	Slc35a4	exon	ENSMUSG00000033272	ProperStrand	10	1	-14.9109
chr8	3388354	3388371	protein_coding	A430078G23Rik	exon	ENSMUSG00000074497	ProperStrand	8	chr16	23110854	23110962	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-15.8404
chr6	72289967	72290011	protein_coding	Usp39	exon	ENSMUSG00000056305	ProperStrand	16	chr3	123210877	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-7.5072
chr9	48793555	48793588	protein_coding	Usp28	utr5	ENSMUSG00000032267	NonProperStrand	7	chr1	39605590	39605696	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	NonProperStrand	4	1	-inf
chr7	17200181	17200203	protein_coding	Grlf1	utr5	ENSMUSG00000058230	ProperStrand	38	chr19	46079316	46079332	protein_coding	Hps6	exon	ENSMUSG00000074811	ProperStrand	56	1	-14.3814
chr1	174248992	174249083	protein_coding	Igsf8	exon	ENSMUSG00000038034	ProperStrand	25	chr9	15119747	15119970	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-10.3361
chr6	127717195	127717278	protein_coding	Prmt8	intron	ENSMUSG00000030350	ProperStrand	8	chr2	32818899	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	3	-18.9389
chr7	38354919	38354935	protein_coding	Zfp536	exon	ENSMUSG00000043456	NonProperStrand	236	chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-5.0464
chr2	170426902	170426920	protein_coding	4930470P17Rik	utr5	ENSMUSG00000043583	ProperStrand	8	chr9	120038613	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-6.9869
chr12	111891499	111891630	protein_coding	Dync1h1	intron	ENSMUSG00000018707	ProperStrand	648	chr14	49809167	49809202	protein_coding	Naa30	utr3	ENSMUSG00000036282	ProperStrand	13	1	-11.6645
chr2	32818878	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	chr5	147646802	147646848	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	3	-2.9489
chr7	107778383	107778399	protein_coding	Rab6a	exon	ENSMUSG00000030704	ProperStrand	23	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-5.4450
chr12	111854808	111887495	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr7	29136632	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	7	-1.6264
chr4	56910502	56910615	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	chr17	35087894	35087946	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	4	-0.9461
chr18	42728235	42728308	protein_coding	Tcerg1	intron	ENSMUSG00000024498	ProperStrand	210	chr10	110918552	110918642	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-1.3701
chr7	52475868	52475912	protein_coding	Tead2	exon	ENSMUSG00000030796	ProperStrand	39	chr15	75615991	75616039	protein_coding	Zc3h3	exon	ENSMUSG00000075600	ProperStrand	14	2	-inf
chr5	145890754	145890854	protein_coding	Pdap1	utr3	ENSMUSG00000029623	ProperStrand	112	chr7	148634774	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-2.8471
chr4	155135128	155135145	protein_coding	Atad3a	utr5	ENSMUSG00000029036	ProperStrand	28	chr8	75071970	75071987	protein_coding	Med26	utr5	ENSMUSG00000045248	ProperStrand	45	1	-15.4247
chr4	103100536	103100554	lincRNA	Gm12718	intron	ENSMUSG00000086136	ProperStrand	10	chr4	130305550	130305620	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	1	-13.5730
chr12	111886843	111886942	protein_coding	Dync1h1	intron	ENSMUSG00000018707	ProperStrand	648	chr12	29316492	29316519	protein_coding	Rps7	exon	ENSMUSG00000061477	ProperStrand	129	7	-21.2434
chr2	90235291	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	27372150	27372167	LTR	RMER4B	ERVK	chr17RMER4B27372017	NonProperStrand	1	1	-inf
chr19	11104370	11104460	LINE	MusHAL1	L1	chr19MusHAL111103980	NonProperStrand	1	chr19	11103847	11103927	LTR	ORR1A1	MaLR	chr19ORR1A111103633	NonProperStrand	1	1	-inf
chr1	66521957	66521973	protein_coding	Unc80	intron	ENSMUSG00000055567	NonProperStrand	212	chr11	116938556	116938636	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-3.7343
chr15	27832308	27832324	protein_coding	Trio	exon	ENSMUSG00000022263	ProperStrand	108	chr8	73419710	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.1174
chr2	121891337	121891359	protein_coding	Spg11	exon	ENSMUSG00000033396	NonProperStrand	5	chr15	34370585	34370675	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-8.5662
chr7	80013013	80013093	SINE	B4A	B4	chr7B4A80012892	ProperStrand	1	chr3	32856859	32856949	protein_coding	Pex5l	intron	ENSMUSG00000027674	ProperStrand	52	1	-inf
chr2	76582985	76583075	protein_coding	Ttn	exon	ENSMUSG00000051747	ProperStrand	66	chr2	130101241	130101261	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-6.4025
chr4	43505794	43505827	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr12	82317769	82317785	protein_coding	Slc8a3	exon	ENSMUSG00000079055	ProperStrand	126	1	-1.8180
chr2	83720894	83720984	protein_coding	Fam171b	utr3	ENSMUSG00000048388	ProperStrand	1	chr7	117189962	117190042	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-inf
chr4	116828182	116828218	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	chr4	131908810	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-1.0955
chr5	116047445	116061219	protein_coding	Gcn1l1	exon	ENSMUSG00000041638	ProperStrand	408	chr1	162967498	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	3	-2.1322
chr11	32405564	32405583	protein_coding	Ubtd2	intron	ENSMUSG00000044949	NonProperStrand	5	chr16	23111389	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-14.5684
chr7	89417747	89417837	protein_coding	Sh3gl3	intron	ENSMUSG00000030638	NonProperStrand	11	chr7	82994584	82994664	protein_coding	Klhl25	intron	ENSMUSG00000055652	NonProperStrand	1	1	-inf
chr5	145532375	145532394	protein_coding	Trrap	intron	ENSMUSG00000045482	ProperStrand	399	chr17	24343586	24343602	protein_coding	Ntn3	exon	ENSMUSG00000079662	ProperStrand	237	1	-6.7826
chr11	82757119	82757139	antisense	1700003F17Rik	.	ENSMUSG00000086327	NonProperStrand	12	chr15	36538179	36538260	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	1	-11.1571
chr15	36528986	36529037	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr18	46358669	46358686	protein_coding	Trim36	intron	ENSMUSG00000033949	NonProperStrand	5	1	-13.0417
chr15	30780115	30780133	protein_coding	Ctnnd2	intron	ENSMUSG00000022240	ProperStrand	24	chr5	121655016	121655096	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.5126
chr5	139660484	139660500	protein_coding	Heatr2	exon	ENSMUSG00000025857	NonProperStrand	3	chr11	6428108	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-9.3720
chr4	124736326	124736344	protein_coding	Dnali1	exon	ENSMUSG00000042707	ProperStrand	45	chr18	75161533	75161584	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-7.7775
chr4	137303682	137303734	protein_coding	Alpl	exon	ENSMUSG00000028766	ProperStrand	80	chr3	96654255	96654271	protein_coding	Pdzk1	exon	ENSMUSG00000038298	ProperStrand	101	1	-11.6886
chr4	3761618	3762409	protein_coding	Rps20	utr3	ENSMUSG00000028234	ProperStrand	71	chr16	23110960	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-3.6310
chr5	111185227	111185307	protein_coding	Ep400	exon	ENSMUSG00000029505	ProperStrand	176	chr7	49732040	49732551	protein_coding	Zfp141	exon	ENSMUSG00000092416	ProperStrand	17	1	-13.7157
chr4	139021322	139023162	protein_coding	Ubr4	exon	ENSMUSG00000066036	ProperStrand	304	chr11	101466286	101466351	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	1	-5.6586
chr1	180180171	180180228	protein_coding	Pppde1	utr3	ENSMUSG00000026502	ProperStrand	27	chr19	8800089	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-9.2143
chr2	158185530	158185630	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr18	75161534	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-1.0755
chr3	87689184	87689203	protein_coding	Prcc	exon	ENSMUSG00000004895	ProperStrand	38	chr18	33954816	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-4.3641
chr11	63778011	63789816	protein_coding	Cox10	exon	ENSMUSG00000042148	ProperStrand	21	chr18	35714194	35714274	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-5.4554
chr15	81859717	81860055	protein_coding	Xrcc6	exon	ENSMUSG00000022471	ProperStrand	34	chr16	23110558	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.4743
chr17	35299534	35299624	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	chr6	70805452	70805532	snoRNA	ENSMUSG00000065750_SNORA5	.	ENSMUSG00000065750	ProperStrand	165	1	-2.8995
chr2	63936036	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr7	134671387	134671463	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-2.6628
chr11	102294588	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr17	35087894	35087939	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-1.3329
chr12	77707234	77707306	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	chr1	162965981	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-1.3506
chr5	54232288	54232367	protein_coding	Tbc1d19	intron	ENSMUSG00000039178	ProperStrand	4	chr5	121655101	121655153	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-9.2889
chr12	4206912	4206966	protein_coding	Adcy3	exon	ENSMUSG00000020654	ProperStrand	33	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-8.1206
chr15	99538222	99538395	protein_coding	Smarcd1	exon	ENSMUSG00000023018	ProperStrand	43	chr4	131908747	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.7076
chr2	155898469	155898523	protein_coding	Cpne1	utr3	ENSMUSG00000074643	ProperStrand	10	chr16	23110909	23110945	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.7978
chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	2	-4.4510
chr5	54040935	54045098	protein_coding	Rbpj	utr3	ENSMUSG00000039191	ProperStrand	96	chr16	23111375	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-3.5971
chr9	109783065	109783145	protein_coding	Cdc25a	intron	ENSMUSG00000032477	ProperStrand	27	chr9	108298661	108298751	protein_coding	1700102P08Rik	intron	ENSMUSG00000032611	NonProperStrand	1	1	-inf
chr9	44143151	44143231	protein_coding	H2afx	exon	ENSMUSG00000049932	ProperStrand	137	chr9	15119678	15119768	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.3232
chr17	35822057	35822257	protein_coding	Ddr1	exon	ENSMUSG00000003534	ProperStrand	129	chr12	92811919	92812009	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	6	-19.7334
chrX	156561797	156561855	protein_coding	Pdha1	exon	ENSMUSG00000031299	ProperStrand	27	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-6.7897
chr19	7355397	7355449	protein_coding	Mark2	utr3	ENSMUSG00000024969	ProperStrand	75	chr10	4741155	4741171	protein_coding	Myct1	utr3	ENSMUSG00000046916	ProperStrand	42	1	-13.5866
chr1	39603441	39603463	protein_coding	D1Bwg0212e	utr3	ENSMUSG00000003135	ProperStrand	7	chr4	56910496	56910617	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	2	-16.7796
chr12	79910910	79910927	protein_coding	Mpp5	exon	ENSMUSG00000021112	NonProperStrand	26	chr15	79913287	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-5.1914
chr7	31743347	31743382	protein_coding	Lsr	exon	ENSMUSG00000001247	ProperStrand	8	chr11	6428031	6428087	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-7.1562
chr1	38109843	38109869	protein_coding	Rev1	utr3	ENSMUSG00000026082	ProperStrand	48	chr5	115798588	115798641	protein_coding	Cox6a1	exon	ENSMUSG00000041697	ProperStrand	38	2	-19.4475
chr7	137536566	137536603	protein_coding	Ate1	utr3	ENSMUSG00000030850	ProperStrand	14	chr4	131908809	131908848	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.6665
chr13	80247040	80247058	LTR	RMER17B	ERVK	chr13RMER17B80246228	ProperStrand	3	chr1	162965531	162965569	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-9.4650
chrX	77093503	77093524	LTR	ORR1D2-int	MaLR	chrXORR1D2-int77092955	ProperStrand	1	chr16	23110509	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-inf
chr1	192712615	192712631	protein_coding	Rps6kc1	exon	ENSMUSG00000089872	ProperStrand	241	chr2	130103754	130103780	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-5.7195
chr3	130961930	130961946	protein_coding	Hadh	intron	ENSMUSG00000027984	NonProperStrand	13	chr8	126562241	126565068	protein_coding	Urb2	exon	ENSMUSG00000031976	ProperStrand	64	1	-16.2848
chr17	28148294	28148310	protein_coding	Anks1	intron	ENSMUSG00000024219	NonProperStrand	16	chr16	23110828	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.9771
chr8	129468740	129468871	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	chr13	96100592	96100695	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	2	-0.9186
chr13	41453432	41453450	protein_coding	Nedd9	intron	ENSMUSG00000021365	ProperStrand	4	chr1	93012554	93012608	protein_coding	Lrrfip1	exon	ENSMUSG00000026305	ProperStrand	26	1	-19.1369
chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	chr19	8799035	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-2.1179
chr9	78023109	78023150	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr9	95799472	95799516	protein_coding	Atr	exon	ENSMUSG00000032409	ProperStrand	44	1	-6.4906
chr5	100855902	100855941	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr4	149618183	149622225	protein_coding	Eno1	exon	ENSMUSG00000063524	ProperStrand	432	4	-9.9893
chr5	121655025	121655155	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	chr13	49779678	49779804	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	6	-1.1364
chr10	62342367	62342457	protein_coding	Tet1	exon	ENSMUSG00000047146	ProperStrand	286	chr9	15118245	15118322	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-0.9742
chr7	137860279	137872335	protein_coding	Tacc2	exon	ENSMUSG00000030852	ProperStrand	95	chr4	131908809	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-3.5412
chr17	64950944	64951034	protein_coding	Man2a1	utr5	ENSMUSG00000024085	ProperStrand	20	chr4	131865388	131865468	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	2	-10.0291
chr8	108233712	108233729	protein_coding	4933405L10Rik	exon	ENSMUSG00000013158	ProperStrand	94	chrX	34622906	34622991	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-2.3854
chr11	74946004	74946094	protein_coding-noncoding	Smg6	utr5	ENSMUSG00000038290	NonProperStrand	1	chr11	74945865	74945955	protein_coding	Smg6	intron	ENSMUSG00000038290	NonProperStrand	20	1	-inf
chr9	21209232	21209322	protein_coding	Ilf3	utr3	ENSMUSG00000032178	ProperStrand	164	chr11	69483184	69483264	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-0.9499
chr15	98673617	98673795	protein_coding	Mll2	exon	ENSMUSG00000048154	ProperStrand	170	chr12	105582410	105582426	protein_coding	Serpina3k	exon	ENSMUSG00000058207	ProperStrand	14	1	-14.1916
chr6	87713265	87713355	LTR	MLT1F1	MaLR	chr6MLT1F187713165	NonProperStrand	1	chr6	87713090	87713180	LTR	RMER17C	ERVK	chr6RMER17C87712788	NonProperStrand	1	1	-inf
chr9	106333479	106333566	protein_coding	Rpl29	exon	ENSMUSG00000048758	ProperStrand	45	chr19	8799048	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-6.4004
chr9	7962321	7962338	protein_coding	Yap1	exon	ENSMUSG00000053110	NonProperStrand	7	chr11	69483136	69483231	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-6.6014
chrX	91435157	91435176	protein_coding	Eif2s3x	utr3	ENSMUSG00000035150	NonProperStrand	83	chr13	65259659	65259720	snoRNA	ENSMUSG00000089161_SNORA48	.	ENSMUSG00000089161	ProperStrand	28	2	-19.0904
chr2	26493412	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr19	47970971	47970987	protein_coding	Itprip	utr3	ENSMUSG00000079254	ProperStrand	75	1	-5.7558
chr17	34019231	34019276	protein_coding	Kifc1	exon	ENSMUSG00000079553	ProperStrand	47	chr4	131908689	131908750	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.5727
chr2	29927554	29927629	protein_coding	Set	utr3	ENSMUSG00000054766	ProperStrand	167	chr11	116938560	116938650	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	2	-6.9855
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr7	29147367	29147410	protein_coding	Plekhg2	exon	ENSMUSG00000037552	ProperStrand	6	1	-11.6677
chr11	53396860	53397324	protein_coding	Kif3a	exon	ENSMUSG00000018395	ProperStrand	23	chr7	148634753	148634836	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-5.8469
chr4	128999170	128999206	protein_coding	Rbbp4	exon	ENSMUSG00000057236	ProperStrand	22	chr1	162965550	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.1855
chr9	65508209	65508299	protein_coding	Rbpms2	utr3	ENSMUSG00000032387	ProperStrand	85	chr10	110918599	110918679	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-2.8223
chr5	143533606	143533696	protein_coding	Tnrc18	exon	ENSMUSG00000039477	ProperStrand	39	chr4	131908240	131908320	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.0833
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr13	23831139	23831170	protein_coding	Hist1h1c	exon	ENSMUSG00000036181	ProperStrand	99	1	-6.0379
chr6	17607238	17610775	protein_coding	Capza2	exon	ENSMUSG00000015733	ProperStrand	23	chr11	69483136	69483191	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-7.0710
chr8	113530418	113530508	protein_coding	Ddx19b	utr3	ENSMUSG00000033658	ProperStrand	30	chr10	23505203	23505284	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.3011
chr2	112219501	112244320	protein_coding	2410042D21Rik	utr5	ENSMUSG00000027132	NonProperStrand	3	chr7	116664793	116664826	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-14.6076
chr11	69400927	69400943	protein_coding	Trp53	exon	ENSMUSG00000059552	NonProperStrand	1	chr5	121655026	121655126	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	NonProperStrand	38	1	-inf
chr14	32042378	32042394	protein_coding	Sema3g	utr3	ENSMUSG00000021904	NonProperStrand	47	chr4	122968677	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-6.7649
chr11	84806111	84806211	protein_coding	Usp32	exon	ENSMUSG00000000804	ProperStrand	45	chr1	162968445	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-6.6485
chr4	69910395	69910475	protein_coding	Cdk5rap2	utr3	ENSMUSG00000039298	ProperStrand	810	chrX	71517870	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	2	-3.2323
chr10	127687341	127687361	protein_coding	Timeless	exon	ENSMUSG00000039994	ProperStrand	53	chr8	32260335	32260423	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	2	-8.0518
chr6	136893191	136893207	LINE	Lx9	L1	chr6Lx9136892999	NonProperStrand	4	chr15	79908930	79908956	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-11.1005
chr7	13516167	13516190	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr7	150710075	150710091	protein_coding	Nap1l4	exon	ENSMUSG00000059119	ProperStrand	31	1	-9.9969
chr7	139814198	139814216	protein_coding	Fgfr2	intron	ENSMUSG00000030849	ProperStrand	100	chr16	11144177	11144277	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	1	-9.4352
chr11	95824716	95824766	protein_coding	Igf2bp1	utr3	ENSMUSG00000013415	ProperStrand	140	chr16	23110454	23110508	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	5	-6.8602
chr16	17023590	17023636	protein_coding	Mapk1	exon	ENSMUSG00000063358	ProperStrand	67	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-8.7580
chr9	67065159	67065223	protein_coding	Tln2	utr3	ENSMUSG00000052698	ProperStrand	79	chr10	90581049	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	2	-7.1489
chr5	90682002	90682522	protein_coding	Ankrd17	exon	ENSMUSG00000055204	ProperStrand	77	chr7	118219574	118219609	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	5	-15.4817
chr1	63225619	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	chr5	121655027	121655127	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	10	-2.6232
chr2	28544725	28544771	protein_coding	Tsc1	utr3	ENSMUSG00000026812	ProperStrand	29	chr4	151413542	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	1	-8.4852
chr2	170063185	170063265	LINE	Lx4B	L1	chr2Lx4B170062935	NonProperStrand	1	chr2	170063373	170063463	SINE	B2_Mm2	B2	chr2B2_Mm2170063291	ProperStrand	1	1	-inf
chr5	145016715	145024879	protein_coding	Bri3	exon	ENSMUSG00000047843	ProperStrand	16	chr17	13112450	13112510	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	4	-19.0582
chr2	131018417	131018860	protein_coding	Cdc25b	exon	ENSMUSG00000027330	ProperStrand	20	chr5	108334196	108334286	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	3	-15.9584
chr19	57447794	57447811	protein_coding	Fam160b1	exon	ENSMUSG00000033478	NonProperStrand	4	chr19	8798740	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-10.4043
chr14	55134999	55135353	protein_coding	Prmt5	exon	ENSMUSG00000023110	ProperStrand	72	chr7	52382787	52382815	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-6.3910
chr13	36182366	36182430	protein_coding	Lyrm4	intron	ENSMUSG00000046573	ProperStrand	8	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-9.2836
chr11	45723144	45723160	protein_coding	Clint1	utr3	ENSMUSG00000006169	NonProperStrand	273	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-5.9221
chr10	127152705	127152721	protein_coding	Myo1a	exon	ENSMUSG00000025401	ProperStrand	93	chr2	63936034	63936053	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-6.9888
chr7	27953586	27953621	protein_coding	Rab4b	utr3	ENSMUSG00000053291	ProperStrand	5	chrX	34622906	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-13.3689
chr11	78385009	78385777	protein_coding	Nlk	exon	ENSMUSG00000017376	ProperStrand	26	chr7	116663738	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.0328
chr19	5492764	5493204	protein_coding	Cfl1	exon	ENSMUSG00000056201	ProperStrand	88	chr1	89673624	89673704	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-2.5848
chr7	3657507	3658338	protein_coding	Rps9	exon	ENSMUSG00000006333	ProperStrand	87	chr10	23505149	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-3.9018
chr11	87797430	87797457	protein_coding	Dynll2	exon	ENSMUSG00000020483	ProperStrand	22	chr13	53285957	53285977	protein_coding	Ror2	intron	ENSMUSG00000021464	ProperStrand	46	1	-15.9065
chr2	152052669	152076165	protein_coding	Csnk2a1	utr5	ENSMUSG00000074698	ProperStrand	91	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.8718
chr15	74347532	74347549	protein_coding	Bai1	intron	ENSMUSG00000034730	ProperStrand	22	chr5	115940303	115940380	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	1	-10.7646
chr13	58503701	58503717	protein_coding	Hnrnpk	intron	ENSMUSG00000021546	NonProperStrand	13	chr4	131865855	131865986	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-7.6072
chr17	39985127	39985209	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr13	65259660	65259719	snoRNA	ENSMUSG00000089161_SNORA48	.	ENSMUSG00000089161	ProperStrand	28	1	-7.4493
chr2	18598901	18598921	protein_coding	Bmi1	utr5	ENSMUSG00000026739	NonProperStrand	4	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-14.6015
chr6	123089131	123089269	protein_coding	Clec4a2	exon	ENSMUSG00000030148	ProperStrand	44	chr18	35716833	35716865	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.6971
chr12	36219400	36219416	protein_coding	Ahr	utr5	ENSMUSG00000019256	NonProperStrand	64	chr12	17552965	17553087	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	3	-11.7185
chr17	88107890	88107917	protein_coding	Msh2	exon	ENSMUSG00000024151	ProperStrand	124	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	4	-12.4718
chr11	11776254	11776285	protein_coding	Ddc	exon	ENSMUSG00000020182	ProperStrand	19	chr7	86278885	86278929	protein_coding	Mfge8	utr3	ENSMUSG00000030605	ProperStrand	73	2	-20.1339
chr19	60846980	60857385	protein_coding	Eif3a	exon	ENSMUSG00000024991	ProperStrand	287	chr7	148634700	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	6	-9.4896
chr7	4745162	4745189	protein_coding	Rpl28	exon	ENSMUSG00000030432	ProperStrand	220	chr11	69483182	69483272	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-1.3187
chr16	18240934	18240962	protein_coding	Ranbp1	intron	ENSMUSG00000005732	ProperStrand	22	chr4	131865443	131865513	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-5.9525
chr17	36408459	36408477	protein_coding	Trim39	utr5	ENSMUSG00000045409	NonProperStrand	8	chr11	69483194	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-6.3191
chrX	5046685	5046775	LINE	L1M2	L1	chrXL1M25046488	ProperStrand	1	chrX	5046925	5047015	LINE	L1M2	L1	chrXL1M25046902	ProperStrand	1	1	-inf
chr6	83747999	83748034	protein_coding	Nagk	exon	ENSMUSG00000034744	ProperStrand	10	chr1	53924798	53924815	protein_coding	Hecw2	intron	ENSMUSG00000042807	ProperStrand	39	1	-17.5357
chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	chr2	158182182	158182280	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	4	-9.3656
mmu-miR-3473b	0	16	miRNA	mmu-miR-3473b	.	mmu-miR-3473b	ProperStrand	33	chr18	33954817	33954948	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	3	-11.1097
chr2	28368986	28369003	protein_coding	Ralgds	utr5	ENSMUSG00000026821	NonProperStrand	60	chr15	37937726	37938473	protein_coding	Ubr5	exon	ENSMUSG00000037487	ProperStrand	258	1	-10.3892
chr16	32382285	32382303	protein_coding	Ubxn7	intron	ENSMUSG00000053774	NonProperStrand	8	chr16	23110870	23110913	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.2180
chr4	46481648	46482843	protein_coding	Anp32b	exon	ENSMUSG00000028333	ProperStrand	229	chr11	106362602	106362652	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-4.7796
chr8	109948758	109948909	protein_coding	Nob1	exon	ENSMUSG00000003848	ProperStrand	28	chr16	23111734	23111753	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.2134
chr10	7639567	7639656	protein_coding	Tab2	exon	ENSMUSG00000015755	ProperStrand	41	chr11	69481384	69481474	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.9041
chr8	109940900	109940990	protein_coding	Nob1	exon	ENSMUSG00000003848	ProperStrand	28	chr12	106269477	106269557	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	2	-9.2104
chr2	133378547	133378564	protein_coding	Bmp2	utr5	ENSMUSG00000027358	NonProperStrand	17	chr11	116713446	116713469	protein_coding	Srsf2	exon	ENSMUSG00000034120	ProperStrand	132	1	-14.2922
chr1	94914143	94914187	protein_coding	Kif1a	utr3	ENSMUSG00000014602	ProperStrand	18	chr17	23687227	23687264	tRNA	tRNA994-ArgCCG	.	1538411	ProperStrand	60	1	-15.7554
chr11	23794837	23794854	protein_coding	Papolg	intron	ENSMUSG00000020273	ProperStrand	3	chr9	15118243	15118312	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	NonProperStrand	11	1	-20.0073
chr5	109076457	109076473	protein_coding	Tmem175	utr3	ENSMUSG00000013495	ProperStrand	31	chr11	68886977	68887031	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-5.4198
chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr3	100726559	100726577	protein_coding	Trim45	utr5	ENSMUSG00000033233	ProperStrand	59	1	-6.4875
chrX	37982713	37982804	LINE	L1_Mus4	L1	chrXL1_Mus437982715	ProperStrand	1	chrX	37982604	37982684	SINE	B1_Mus2	Alu	chrXB1_Mus237982579	ProperStrand	1	1	-inf
chr8	113347365	113347405	protein_coding	Sf3b3	exon	ENSMUSG00000033732	ProperStrand	181	chr4	131865931	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-0.9425
chr3	99955054	99955868	protein_coding	Wdr3	exon	ENSMUSG00000033285	ProperStrand	30	chr4	131908240	131908298	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.5256
chr10	75503054	75503144	protein_coding	Zfp280b	utr3	ENSMUSG00000049764	ProperStrand	25	chr11	6428035	6428115	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.8448
chr1	91358413	91358430	protein_coding	Agap1	intron	ENSMUSG00000055013	ProperStrand	229	chr17	35088971	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-3.3203
chr14	51427116	51427206	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr11	116938556	116938636	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-0.8748
chr1	173177140	173177184	protein_coding	Ndufs2	exon	ENSMUSG00000013593	ProperStrand	32	chr10	110918583	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-4.6358
chr1	183853750	183853767	protein_coding	Enah	exon	ENSMUSG00000022995	NonProperStrand	33	chr17	24857716	24857847	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	3	-8.4615
chr1	65243321	65249311	protein_coding	Pikfyve	exon	ENSMUSG00000025949	ProperStrand	59	chr2	166890504	166890557	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-7.5910
chr5	151755616	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr4	122968635	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-1.2974
chr13	29792350	29792441	protein_coding	Cdkal1	intron	ENSMUSG00000006191	NonProperStrand	41	chr12	13442402	13442482	protein_coding	Nbas	intron	ENSMUSG00000020576	NonProperStrand	23	1	-16.0298
chr19	22498509	22922576	protein_coding	Trpm3	intron	ENSMUSG00000052387	ProperStrand	54	chr7	116663633	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-4.7171
chr16	32633621	32633678	SINE	B3	B2	chr16B332633558	ProperStrand	3	chr19	8798484	8798550	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	3	-inf
chr16	23110454	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	chr16	43886792	43886929	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	13	-4.7695
chr12	66093622	66096503	protein_coding	Fam179b	exon	ENSMUSG00000035614	ProperStrand	21	chr18	35714216	35714260	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-5.4554
chr19	10059506	10059542	protein_coding	Fth1	utr3	ENSMUSG00000024661	ProperStrand	75	chr9	15119646	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.2505
chr5	99443584	99443601	protein_coding	Prkg2	intron	ENSMUSG00000029334	NonProperStrand	57	chr9	64024930	64024970	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	1	-9.2448
chr9	15514257	15514276	protein_coding	Slc36a4	exon	ENSMUSG00000043885	ProperStrand	94	chr7	87236827	87236880	protein_coding	Zfp710	utr3	ENSMUSG00000048897	ProperStrand	229	1	-9.7261
chr3	79285242	79285314	protein_coding	Fnip2	exon	ENSMUSG00000061175	ProperStrand	45	chr10	23506278	23506346	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-7.5210
chr2	60625305	60625358	protein_coding	Rbms1	intron	ENSMUSG00000026970	ProperStrand	26	chr9	120037993	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	4	-18.4230
chr3	47920185	47920265	LINE	Lx2	L1	chr3Lx247920113	NonProperStrand	1	chr3	47920378	47920468	LINE	Lx2	L1	chr3Lx247920299	NonProperStrand	1	1	-inf
chr12	119352405	119352421	protein_coding	Dnahc11	exon	ENSMUSG00000018581	ProperStrand	65	chr6	125112723	125112892	protein_coding	Gapdh	exon	ENSMUSG00000057666	ProperStrand	356	1	-9.5853
chr12	102161441	102161457	protein_coding	Ccdc88c	exon	ENSMUSG00000021182	ProperStrand	151	chr10	110918553	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-3.3909
chr6	131601357	131601379	LTR	RLTR18	ERVK	chr6RLTR18131600843	NonProperStrand	1	chr3	123210854	123210875	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-inf
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr16	23111373	23111510	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	19	-6.2983
chrX	7500214	7500314	protein_coding	Pcsk1n	utr3	ENSMUSG00000039278	ProperStrand	3	chr1	162967115	162967178	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	1	-15.0538
chr11	80196945	80201433	protein_coding	Zfp207	utr5	ENSMUSG00000017421	ProperStrand	21	chr4	131908236	131908330	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-8.1411
chr19	10059121	10059272	protein_coding	Fth1	exon	ENSMUSG00000024661	ProperStrand	75	chr1	55241781	55241802	protein_coding	Rftn2	intron	ENSMUSG00000025978	ProperStrand	4	1	-18.3623
chr17	22334892	22334982	LTR	RLTRETN_Mm	ERVK	chr17RLTRETN_Mm22334697	ProperStrand	2	chr9	17987831	17987911	LTR	RLTRETN_Mm	ERVK	chr9RLTRETN_Mm17987774	ProperStrand	1	1	-inf
chr4	154010843	154010860	protein_coding	Prdm16	utr5	ENSMUSG00000039410	ProperStrand	44	chr6	71832629	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-6.2218
chr2	18136469	18136513	protein_coding	Dnajc1	utr3	ENSMUSG00000026740	ProperStrand	10	chr11	69483196	69483268	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-5.8555
chr2	90235299	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	146969904	146969921	protein_coding	Ppfibp1	exon	ENSMUSG00000016487	NonProperStrand	7	1	-8.8025
chr12	4215575	4215604	protein_coding-noncoding	Cenpo	utr3	ENSMUSG00000020652	ProperStrand	3	chr7	116663634	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-inf
chr13	49782836	49783530	protein_coding	Iars	exon	ENSMUSG00000037851	ProperStrand	95	chr9	120038651	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-4.0021
chr1	52289831	52289932	protein_coding	Gls	utr5	ENSMUSG00000026103	ProperStrand	56	chr9	120038006	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	7	-19.4225
chr9	108398274	108398479	protein_coding	Usp19	exon	ENSMUSG00000006676	ProperStrand	57	chr9	120039590	120039680	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-5.8272
chr11	62951997	62952014	protein_coding	Pmp22	intron	ENSMUSG00000018217	NonProperStrand	40	chr11	6428064	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-9.6649
chr19	8963165	8963251	miRNA	Mir5136	.	ENSMUSG00000093314	ProperStrand	45	chr19	8799581	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-7.3395
chr19	43579408	43579425	protein_coding	Got1	intron	ENSMUSG00000025190	NonProperStrand	147	chr17	13173698	13173772	protein_coding	Wtap	exon	ENSMUSG00000060475	ProperStrand	119	2	-15.9849
chr15	5129403	5129419	protein_coding	Prkaa1	utr3	ENSMUSG00000050697	ProperStrand	10	chr17	35089181	35089233	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-9.1048
chr1	59761650	59761672	snoRNA	ENSMUSG00000089093_Snord11	.	ENSMUSG00000089093	ProperStrand	193	chr3	68889191	68889240	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-1.3402
chr17	83098307	83098397	LINE	L1Md_A	L1	chr17L1Md_A83095132	ProperStrand	1	chr7	54442716	54442796	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-inf
chr17	85482653	85489599	protein_coding	Prepl	utr5	ENSMUSG00000024127	ProperStrand	106	chr9	120039601	120039678	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.3207
chr6	91026619	91026671	protein_coding	Nup210	exon	ENSMUSG00000030091	ProperStrand	140	chr3	123210854	123210890	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-0.8626
chr4	154529907	154529960	protein_coding	Ski	utr3	ENSMUSG00000029050	ProperStrand	28	chr11	6428035	6428093	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.6242
chr9	67749371	67750654	protein_coding	Vps13c	utr3	ENSMUSG00000035284	ProperStrand	69	chr17	24857794	24857851	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.0662
chr10	53718541	53718558	protein_coding	Man1a	intron	ENSMUSG00000003746	ProperStrand	16	chr19	44377930	44377974	protein_coding	Scd2	utr3	ENSMUSG00000025203	ProperStrand	219	1	-13.4037
chr18	61715365	61715386	protein_coding	Csnk1a1	utr5	ENSMUSG00000024576	NonProperStrand	35	chr19	8799581	8799644	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-7.8432
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	112593963	112593979	protein_coding	Ryr3	intron	ENSMUSG00000057378	NonProperStrand	24	1	-6.2570
chr4	122924416	122924432	protein_coding	Heyl	utr3	ENSMUSG00000032744	ProperStrand	31	chr4	131908810	131908870	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-4.0157
chr9	40612876	40612921	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	chr8	13876096	13876226	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	4	-11.6458
chr7	125263202	125263365	protein_coding	Arl6ip1	utr3	ENSMUSG00000030654	ProperStrand	57	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-1.5795
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr11	62416960	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	3	-2.7390
chr9	64024941	64024972	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	chr8	98269959	98270059	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-1.7756
chr2	27301630	27301683	protein_coding	Brd3	utr3	ENSMUSG00000026918	ProperStrand	85	chr4	131866174	131866264	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-3.0305
chr2	90235292	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr14	80262509	80262525	lincRNA	Gm6999	intron	ENSMUSG00000075495	ProperStrand	265	1	-1.8328
chr4	131866260	131866292	lincRNA	Snhg12	exon	ENSMUSG00000086290	ProperStrand	178	chr9	120040197	120040252	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	2	-11.7850
chr7	31375008	31375108	protein_coding	Zbtb32	exon	ENSMUSG00000006310	ProperStrand	2	chr7	67125744	67125817	snoRNA	ENSMUSG00000089375_Snord107	.	ENSMUSG00000089375	ProperStrand	451	1	-16.8036
chr4	152856778	152856794	protein_coding	Ajap1	utr5	ENSMUSG00000039546	ProperStrand	51	chr11	6428076	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.4890
chr16	4886395	4886411	protein_coding	Mgrn1	exon	ENSMUSG00000022517	NonProperStrand	157	chr17	35089181	35089236	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-3.6516
chr10	5892138	5892180	protein_coding	1700052N19Rik	utr3	ENSMUSG00000061759	ProperStrand	8	chr19	8800377	8800467	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-7.5245
chr14	48149640	48149769	protein_coding	Fbxo34	exon	ENSMUSG00000037536	ProperStrand	11	chr6	71832550	71832579	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-9.0343
chr10	10439853	10439870	protein_coding	Grm1	exon	ENSMUSG00000019828	NonProperStrand	17	chr7	63181755	63181818	protein_coding	Cyfip1	exon	ENSMUSG00000030447	ProperStrand	23	1	-17.6220
chr8	129468800	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	chr3	96528187	96528277	snoRNA	ENSMUSG00000065669_SNORA5	.	ENSMUSG00000065669	ProperStrand	180	2	-4.2713
chr13	54626067	54626084	protein_coding	4732471D19Rik	exon	ENSMUSG00000043183	NonProperStrand	18	chr1	63225253	63225273	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	1	-11.2764
chr15	79654442	79654459	protein_coding	Cbx6	utr3	ENSMUSG00000089715	ProperStrand	16	chr14	65372765	65372889	snoRNA	ENSMUSG00000064442_SNORA36	.	ENSMUSG00000064442	NonProperStrand	1	1	-inf
chr5	115939531	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr17	35299504	35299638	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	2	-1.0583
chr19	42037902	42038353	protein_coding	Mms19	exon	ENSMUSG00000025159	ProperStrand	52	chr3	68889051	68889151	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-3.5188
chr6	142983668	142984756	protein_coding	5730419I09Rik	exon	ENSMUSG00000030279	ProperStrand	81	chr11	106362640	106362694	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-6.8081
chr7	88186459	88186475	protein_coding	Zfp592	exon	ENSMUSG00000005621	NonProperStrand	32	chr19	8963027	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.3834
chr5	121654997	121655097	protein_coding	Rpl6	intron	ENSMUSG00000029614	ProperStrand	332	chr1	162965560	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-1.4268
chr2	130267913	130267958	protein_coding	Vps16	exon	ENSMUSG00000027411	ProperStrand	25	chr7	134341340	134341357	protein_coding	Tbc1d10b	utr3	ENSMUSG00000042492	ProperStrand	187	1	-12.8068
chr11	32644639	32644665	protein_coding	Fbxw11	utr3	ENSMUSG00000020271	ProperStrand	36	chr18	63109676	63109692	protein_coding	Apcdd1	exon	ENSMUSG00000071847	NonProperStrand	254	1	-11.4511
chr15	8152225	8181201	protein_coding	2410089E03Rik	exon	ENSMUSG00000039801	ProperStrand	43	chr11	55296195	55296334	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	5	-inf
chr2	157293278	157294230	protein_coding	Src	exon	ENSMUSG00000027646	ProperStrand	32	chr18	35716692	35716782	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.2677
chr1	24621340	24621409	protein_coding	Gm10925	utr3	ENSMUSG00000090378	ProperStrand	320	chr12	60141412	60141489	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-3.6034
chrX	10295624	10295746	protein_coding	Mid1ip1	exon	ENSMUSG00000008035	ProperStrand	27	chr11	116034662	116034681	protein_coding	Acox1	utr3	ENSMUSG00000020777	ProperStrand	4	1	-inf
chr4	49655023	49657412	protein_coding	Rnf20	exon	ENSMUSG00000028309	ProperStrand	58	chr10	110918590	110918670	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-3.5111
chr17	32259529	32259629	protein_coding	Notch3	exon	ENSMUSG00000038146	ProperStrand	181	chr10	110918636	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-1.5855
chr4	118972716	118983365	protein_coding	Ppih	utr3	ENSMUSG00000060288	ProperStrand	10	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-9.4968
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr2	32818802	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	5	-2.3538
chr19	5798169	5798223	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr16	32621308	32621361	protein_coding	Tfrc	exon	ENSMUSG00000022797	ProperStrand	71	4	-inf
chr5	74489227	74489317	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	NonProperStrand	6	chr13	44965305	44965385	protein_coding	Jarid2	intron	ENSMUSG00000038518	ProperStrand	372	1	-14.4128
chr4	122973292	122975003	protein_coding	Pabpc4	exon	ENSMUSG00000011257	ProperStrand	85	chr9	64143795	64143875	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-7.0789
chr9	44143937	44143955	protein_coding	H2afx	utr3	ENSMUSG00000049932	ProperStrand	137	chr17	24665420	24665496	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-3.3856
chr7	13610711	13610760	protein_coding	Trim28	exon	ENSMUSG00000005566	ProperStrand	296	chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	1	-5.6791
chr15	36527811	36528008	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr1	137271434	137271450	protein_coding	Shisa4	intron	ENSMUSG00000041889	ProperStrand	64	1	-7.7538
chr4	3761809	3762151	protein_coding	Rps20	exon	ENSMUSG00000028234	ProperStrand	71	chr10	110918558	110918638	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-3.1426
chr6	92193667	92193723	protein_coding	Trh	exon	ENSMUSG00000005892	ProperStrand	87	chr8	129468746	129468782	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	2	-6.2816
chr1	7141783	7141807	protein_coding	Pcmtd1	intron	ENSMUSG00000051285	ProperStrand	19	chr16	23110524	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.5826
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr17	24665435	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-1.1721
chr7	117189875	117189975	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	chr17	35384145	35384196	snoRNA	ENSMUSG00000065273_SNORD83	.	ENSMUSG00000065273	ProperStrand	244	1	-1.0811
chr8	49091558	49091648	LTR	ORR1D1	MaLR	chr8ORR1D149091322	NonProperStrand	1	chr18	24150464	24150554	protein_coding	Zfp35	intron	ENSMUSG00000063281	ProperStrand	3	1	-inf
chr15	81110991	81111009	SINE	ID4	ID	chr15ID481110956	ProperStrand	272	chr11	106362329	106362346	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	NonProperStrand	6	1	-15.0380
chr9	40611929	40611977	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr18	57400307	57400324	protein_coding	Megf10	exon	ENSMUSG00000024593	ProperStrand	143	1	-6.4147
chr2	90235315	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	32197416	32197432	protein_coding	Rrp1b	exon	ENSMUSG00000058392	NonProperStrand	39	1	-5.2962
chr1	39605559	39605591	processed_transcript	Gm15832	.	ENSMUSG00000085894	ProperStrand	8	chr5	121655100	121655138	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-7.7589
chr15	89199862	89200112	protein_coding	Ncaph2	exon	ENSMUSG00000008690	ProperStrand	65	chr10	107769291	107769810	protein_coding	Pawr	utr5	ENSMUSG00000035873	ProperStrand	39	1	-14.0141
chr10	77512848	77512910	protein_coding	Dnmt3l	exon	ENSMUSG00000000730	ProperStrand	37	chr10	98473410	98477104	protein_coding	Atp2b1	exon	ENSMUSG00000019943	ProperStrand	31	1	-15.6068
chr9	42067829	42067848	protein_coding	Sc5d	exon	ENSMUSG00000032018	ProperStrand	19	chr16	21926480	21926496	protein_coding	Map3k13	exon	ENSMUSG00000033618	ProperStrand	16	1	-18.3346
chr5	92714634	92714658	protein_coding	Sdad1	utr3	ENSMUSG00000029415	ProperStrand	63	chr7	116664823	116664924	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	5	-11.5471
chr12	21397134	21397166	protein_coding	Ywhaq	utr3	ENSMUSG00000076432	ProperStrand	70	chr8	73419657	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.8554
chr16	92490557	92490613	protein_coding	2410124H12Rik	intron	ENSMUSG00000051297	ProperStrand	5	chr19	8800096	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	4	-19.4035
chr14	55476645	55476661	protein_coding	Homez	exon	ENSMUSG00000057156	NonProperStrand	127	chr3	90016883	90016956	protein_coding	Rps27	exon	ENSMUSG00000090733	ProperStrand	40	1	-12.6272
chr18	56840809	56840899	SINE	B2_Mm2	B2	chr18B2_Mm256840771	ProperStrand	1	chr18	56840482	56840572	SINE	B3	B2	chr18B356840376	ProperStrand	1	1	-inf
chr10	20080843	20080859	protein_coding	Fam54a	utr3	ENSMUSG00000019992	ProperStrand	232	chr11	106649676	106649794	protein_coding	Ddx5	utr5	ENSMUSG00000020719	ProperStrand	181	1	-8.3915
chr8	119113182	119113219	protein_coding	Cdyl2	exon	ENSMUSG00000031758	ProperStrand	35	chr8	74446729	74446745	protein_coding	Zfp617	intron	ENSMUSG00000066880	NonProperStrand	208	1	-11.9076
mmu-miR-6240	1	19	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr14	65372820	65372891	snoRNA	ENSMUSG00000064442_SNORA36	.	ENSMUSG00000064442	ProperStrand	296	1	-2.8946
chr14	70843343	70843363	miRNA	Mir320	.	ENSMUSG00000065528	ProperStrand	6	chr17	30772308	30772324	protein_coding	Dnahc8	utr5	ENSMUSG00000033826	ProperStrand	246	1	-15.2339
chr1	162967735	162967806	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	chr11	69483136	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	10	-10.7243
chr9	15118245	15118321	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	chr9	64022870	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	4	-1.0594
chr11	100444965	100445582	protein_coding	Dnajc7	exon	ENSMUSG00000014195	ProperStrand	49	chr4	131908357	131908409	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.7204
chr3	8778160	8778240	LINE	L1Md_F2	L1	chr3L1Md_F28777879	ProperStrand	1	chr3	8777750	8777840	LTR	MTC-int	MaLR	chr3MTC-int8777279	NonProperStrand	1	1	-inf
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr4	123038179	123038249	protein_coding	Macf1	exon	ENSMUSG00000028649	ProperStrand	320	1	-5.2997
chr11	95910261	95910312	protein_coding	Ube2z	utr3	ENSMUSG00000014349	ProperStrand	41	chr4	131908236	131908284	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.0019
chr6	70794802	70794819	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chr2	26493366	26493466	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-2.0858
chr11	33447040	33447093	SINE	B4A	B4	chr11B4A33447035	NonProperStrand	3	chr9	120038635	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	3	-inf
chr12	80864486	80864566	protein_coding	Rad51l1	intron	ENSMUSG00000059060	NonProperStrand	9	chr12	80847146	80847236	protein_coding	Rad51l1	intron	ENSMUSG00000059060	ProperStrand	26	1	-18.3497
chr7	30972261	30972350	protein_coding	Capns1	utr3	ENSMUSG00000001794	ProperStrand	35	chr16	23111770	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.8115
chr10	62802344	62802360	protein_coding	Sirt1	intron	ENSMUSG00000020063	NonProperStrand	116	chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-6.4315
chr7	52267556	52267572	protein_coding	Scaf1	exon	ENSMUSG00000038406	ProperStrand	81	chr2	158185589	158185653	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-5.8945
chr16	33798948	33798965	protein_coding	Muc13	intron	ENSMUSG00000022824	NonProperStrand	2	chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-13.8971
chr7	134010230	134010327	protein_coding	Taok2	exon	ENSMUSG00000059981	ProperStrand	47	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-4.8647
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr3	82628528	82628548	SINE	B3	B2	chr3B382628428	NonProperStrand	1	1	-inf
chr10	25957973	25957991	protein_coding	Samd3	intron	ENSMUSG00000051354	NonProperStrand	11	chr9	103104282	103104357	protein_coding	Gm20425	exon	ENSMUSG00000090639	ProperStrand	22	1	-19.1540
chr5	45932139	45932155	protein_coding	Fam184b	exon	ENSMUSG00000015879	ProperStrand	3	chr5	108336377	108336406	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-11.1796
chr2	26203131	26203147	protein_coding	Gpsm1	utr3	ENSMUSG00000026930	ProperStrand	93	chr15	101926770	101926810	protein_coding	Eif4b	utr3	ENSMUSG00000058655	ProperStrand	484	1	-8.2565
chr4	43505719	43505809	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr7	20222974	20222990	protein_coding	Clptm1	exon	ENSMUSG00000002981	ProperStrand	109	1	-2.0480
chr18	10052128	10052151	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr15	100033566	100033666	protein_coding	Dip2b	exon	ENSMUSG00000023026	ProperStrand	48	2	-14.6479
mmu-miR-92a-3p	1	21	miRNA	mmu-miR-92a-3p	.	mmu-miR-92a-3p	ProperStrand	7	chr7	29136525	29136584	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-10.7477
chr1	59539683	59539700	protein_coding	Fzd7	utr5	ENSMUSG00000041075	ProperStrand	373	chr17	35089182	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-2.1364
chr15	60661082	60661099	lincRNA	9930014A18Rik	exon	ENSMUSG00000044513	ProperStrand	54	chr11	69483136	69483274	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.6309
chr8	13175090	13175119	protein_coding	Lamp1	utr3	ENSMUSG00000031447	ProperStrand	92	chr14	33005137	33005236	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	2	-5.4980
chr2	28937855	28937935	protein_coding	Ttf1	intron	ENSMUSG00000026803	ProperStrand	15	chr7	116664835	116664925	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-5.1476
chr2	26766780	26766855	snoRNA	ENSMUSG00000065258_SNORD24	.	ENSMUSG00000065258	ProperStrand	130	chr7	29136547	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	4	-5.2074
chr12	32612305	32613461	protein_coding	Hbp1	utr3	ENSMUSG00000002996	ProperStrand	26	chr13	49779655	49779745	protein_coding	Iars	intron	ENSMUSG00000037851	ProperStrand	95	1	-14.0855
chr13	97171340	97171358	protein_coding	Poc5	intron	ENSMUSG00000021671	ProperStrand	4	chr3	55435951	55435967	protein_coding	Nbea	exon	ENSMUSG00000027799	NonProperStrand	115	1	-17.6227
chr14	31373845	31379166	protein_coding	Tkt	intron	ENSMUSG00000021957	ProperStrand	160	chr1	162968441	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	6	-inf
chr11	63264079	63264095	LTR	ORR1D1	MaLR	chr11ORR1D163264002	NonProperStrand	11	chr11	106362638	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	2	-17.1793
chr8	109192772	109192801	protein_coding	Cdh1	utr3	ENSMUSG00000000303	ProperStrand	283	chr5	74489595	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	3	-3.6832
chr17	87196501	87196518	protein_coding	Epas1	exon	ENSMUSG00000024140	ProperStrand	62	chr7	106627797	106627818	protein_coding	Rps3	exon	ENSMUSG00000030744	ProperStrand	159	1	-11.2916
chr2	4829164	4829180	protein_coding	Sephs1	utr3	ENSMUSG00000026662	NonProperStrand	271	chr17	39985369	39985444	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	2	-5.2907
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr6	125231570	125231661	protein_coding	Tuba3a	exon	ENSMUSG00000067702	ProperStrand	405	1	-3.3568
chr12	32882105	32882121	protein_coding	Pik3cg	exon	ENSMUSG00000020573	ProperStrand	12	chr12	106269336	106269436	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-7.3282
chr2	32563527	32563545	protein_coding	Cdk9	exon	ENSMUSG00000009555	NonProperStrand	49	chr1	74818604	74818620	protein_coding	Wnt6	utr5	ENSMUSG00000033227	NonProperStrand	11	1	-17.2138
chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	2	-6.0121
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr4	153410349	153410365	protein_coding	Ccdc27	exon	ENSMUSG00000039492	ProperStrand	94	1	-7.6964
chr18	10052133	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr14	14731050	14731067	protein_coding	Gm281	intron	ENSMUSG00000084902	ProperStrand	23	1	-10.7388
chr1	153602594	153602610	protein_coding	Edem3	utr5	ENSMUSG00000043019	ProperStrand	84	chr10	90581034	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	4	-13.4033
chr10	60202555	60202573	protein_coding	Slc29a3	intron	ENSMUSG00000020100	ProperStrand	23	chr7	127987285	128001859	protein_coding	Eef2k	utr5	ENSMUSG00000035064	NonProperStrand	31	1	-16.5018
chr17	24857717	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	chr5	92485157	92485219	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	14	-7.9339
chr3	66100724	66100740	protein_coding	Veph1	utr5	ENSMUSG00000027831	NonProperStrand	92	chr14	33974945	33974965	protein_coding	Wdfy4	intron	ENSMUSG00000051506	NonProperStrand	11	1	-15.9097
chr5	143101445	143101514	SINE	ID_B1	B4	chr5ID_B1143101370	NonProperStrand	4	chr11	77995191	77995226	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	4	-inf
chr11	23156234	23195988	protein_coding	Xpo1	exon	ENSMUSG00000020290	ProperStrand	123	chr8	73419657	73419769	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-5.2957
chr14	19101763	19102433	protein_coding	Rpl15	exon	ENSMUSG00000012405	ProperStrand	145	chr10	62766150	62766240	protein_coding	Herc4	intron	ENSMUSG00000020064	ProperStrand	14	1	-14.5139
chr5	136254611	136259175	protein_coding	Mdh2	exon	ENSMUSG00000019179	ProperStrand	50	chr7	116663711	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-4.9294
chr7	28109111	28109211	protein_coding	Ltbp4	exon	ENSMUSG00000040488	ProperStrand	91	chr18	75161532	75161598	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-6.3778
chr5	110666757	110666791	protein_coding	Ankle2	exon	ENSMUSG00000029501	ProperStrand	23	chr16	23110829	23110919	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.7108
chr2	61892317	61892334	protein_coding	Slc4a10	intron	ENSMUSG00000026904	ProperStrand	40	chr2	26493366	26493474	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-4.5101
chr16	5256015	5256031	protein_coding	Fam86	utr5	ENSMUSG00000022544	ProperStrand	231	chr2	91436228	91436251	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-4.8527
chr5	139677707	139677814	protein_coding	Sun1	intron	ENSMUSG00000036817	ProperStrand	108	chr18	73693165	73693190	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-4.3899
chr3	94839765	94839803	protein_coding	Psmd4	exon	ENSMUSG00000005625	ProperStrand	20	chr6	97136106	97136671	protein_coding	Uba3	exon	ENSMUSG00000030061	ProperStrand	37	1	-16.5268
chr2	90235314	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	28443911	28443927	protein_coding	Map3k10	exon	ENSMUSG00000040390	NonProperStrand	21	1	-6.5250
chr11	69557363	69557453	protein_coding	Polr2a	exon	ENSMUSG00000005198	ProperStrand	200	chr11	97643001	97643080	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-0.7360
chr14	118303938	118303955	protein_coding	Gpc6	intron	ENSMUSG00000058571	NonProperStrand	31	chr4	96412508	96412526	protein_coding	Gm12695	intron	ENSMUSG00000078639	ProperStrand	110	1	-13.4321
chr3	22111742	22111767	protein_coding	Tbl1xr1	utr3	ENSMUSG00000027630	ProperStrand	44	chr4	131908232	131908343	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.8887
chr10	62421657	62421713	protein_coding	Dna2	exon	ENSMUSG00000036875	ProperStrand	35	chr4	131908685	131908750	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-5.6471
chr3	53460493	53460593	protein_coding	Frem2	exon	ENSMUSG00000037016	NonProperStrand	11	chr8	22083475	22083492	protein_coding	AY761185	utr3	ENSMUSG00000079120	NonProperStrand	2	2	-inf
chr5	125315761	125315861	protein_coding	Ccdc92	utr3	ENSMUSG00000037979	ProperStrand	45	chr9	64143802	64143873	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-8.3485
chr11	74497106	74497149	protein_coding	Pafah1b1	exon	ENSMUSG00000020745	ProperStrand	20	chrX	34622906	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-8.6954
chr13	56353448	56353465	protein_coding	Neurog1	utr5	ENSMUSG00000048904	ProperStrand	105	chr4	131865855	131865981	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-3.1643
chr18	73693106	73693132	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr11	51551278	51551368	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	2	-1.6027
chr15	81535351	81535429	protein_coding	Rangap1	utr3	ENSMUSG00000022391	ProperStrand	69	chr1	162965574	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-7.7146
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr19	10687504	10688677	protein_coding	Ddb1	exon	ENSMUSG00000024740	ProperStrand	304	1	-7.1671
chr3	55987231	55987247	protein_coding	Nbea	utr5	ENSMUSG00000027799	NonProperStrand	115	chr3	129422041	129422057	protein_coding	Egf	exon	ENSMUSG00000028017	NonProperStrand	4	1	-17.6377
chrX	159307135	159307152	protein_coding	Syap1	intron	ENSMUSG00000031357	NonProperStrand	4	chr16	11144150	11144250	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	1	-16.1302
chr6	52707641	52707689	protein_coding	Tax1bp1	exon	ENSMUSG00000004535	ProperStrand	20	chr9	21637355	21637371	protein_coding	Dock6	exon	ENSMUSG00000032198	ProperStrand	155	1	-13.6414
chr12	8928883	8928910	protein_coding	Laptm4a	exon	ENSMUSG00000020585	ProperStrand	15	chr4	106250023	106250093	protein_coding	Dhcr24	intron	ENSMUSG00000034926	ProperStrand	94	1	-15.2263
chr5	28684843	28684943	protein_coding	Rbm33	exon	ENSMUSG00000048271	ProperStrand	78	chr2	158182156	158182208	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-4.4979
chr16	38158092	38158155	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	chr3	108357403	108357493	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	4	-3.7692
chr10	79866914	79866987	protein_coding	Uqcr11	exon	ENSMUSG00000020163	ProperStrand	2	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-8.3123
chr17	28884546	28884564	protein_coding	Mapk14	utr3	ENSMUSG00000053436	NonProperStrand	2	chr4	131908689	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-8.0336
chr8	90304979	90304995	protein_coding	Zfp423	exon	ENSMUSG00000045333	NonProperStrand	44	chr17	24374127	24376819	protein_coding	Ccnf	exon	ENSMUSG00000072082	ProperStrand	149	1	-12.1135
chr1	164645536	164670654	protein_coding	Prrc2c	utr5	ENSMUSG00000040225	ProperStrand	413	chr17	13112445	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	2	-2.4272
chr17	39390817	39390833	LTR	MMERVK10C-int	ERVK	chr17MMERVK10C-int39390398	NonProperStrand	11	chr8	26827320	26827337	protein_coding	Whsc1l1	utr3	ENSMUSG00000054823	NonProperStrand	17	1	-19.6539
chr1	88024813	88024831	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	chr10	90581079	90581179	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-0.8234
chr13	114803261	114803278	protein_coding	Arl15	intron	ENSMUSG00000042348	NonProperStrand	19	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-11.2563
chr5	92875347	92875364	protein_coding	Scarb2	exon	ENSMUSG00000029426	ProperStrand	30	chr7	116663712	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.7620
chr5	71732426	71732516	LINE	L1Md_F3	L1	chr5L1Md_F371732392	ProperStrand	1	chr18	25890712	25890802	protein_coding	Celf4	intron	ENSMUSG00000024268	ProperStrand	21	1	-inf
chr18	32817050	32817140	LINE	L1_Mus3	L1	chr18L1_Mus332816397	ProperStrand	1	chr9	19462363	19462443	LINE	L1Md_A	L1	chr9L1Md_A19461964	ProperStrand	81	1	-inf
chr19	5287252	5287557	protein_coding	Sf3b2	exon	ENSMUSG00000024853	ProperStrand	102	chr11	59778161	59778177	protein_coding	Rasd1	exon	ENSMUSG00000049892	NonProperStrand	49	1	-12.6567
chr8	83324885	83324906	protein_coding	Gab1	intron	ENSMUSG00000031714	NonProperStrand	8	chr9	15119711	15119767	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-6.5261
chr5	67786906	67786971	protein_coding	Bend4	utr3	ENSMUSG00000092060	ProperStrand	56	chr9	15119970	15120039	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-7.3906
chr6	8199532	8199600	LTR	ETnERV2-int	ERVK	chr6ETnERV2-int8199508	NonProperStrand	2	chr1	88252851	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-14.0852
chr13	97945557	97945606	protein_coding	Gfm2	exon	ENSMUSG00000021666	ProperStrand	26	chr11	69481334	69481412	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-4.7771
chr10	77500170	77500247	protein_coding	Aire	intron	ENSMUSG00000000731	ProperStrand	8	chr8	124102533	124102549	protein_coding	Fbxo31	exon	ENSMUSG00000031811	ProperStrand	9	2	-19.0569
chr11	69550707	69550741	protein_coding	Polr2a	exon	ENSMUSG00000005198	ProperStrand	200	chr19	8799026	8799092	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-3.5342
chr11	20202990	20203090	protein_coding	Slc1a4	utr3	ENSMUSG00000020142	ProperStrand	8	chr10	23506278	23506346	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-11.0679
chr6	135184486	135184550	protein_coding	8430419L09Rik	utr3	ENSMUSG00000030207	ProperStrand	14	chr1	162966852	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-9.1944
chr13	55698280	55698307	protein_coding	Tmed9	exon	ENSMUSG00000058569	ProperStrand	35	chr16	23111690	23111811	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-4.9145
chrX	12868825	12868848	protein_coding	Ddx3x	utr3	ENSMUSG00000000787	ProperStrand	67	chr4	131908809	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-3.4136
chr10	127483291	127483838	protein_coding	Naca	exon	ENSMUSG00000061315	ProperStrand	50	chr11	69483190	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.7653
chr19	10703654	10703675	protein_coding	Ddb1	utr3	ENSMUSG00000024740	ProperStrand	304	chr11	68886976	68887037	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-1.3774
chr1	162967783	162967799	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	chr19	8963025	8963126	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-0.7800
chr12	12944235	12944251	protein_coding	Mycn	exon	ENSMUSG00000037169	NonProperStrand	109	chr17	34020484	34020544	protein_coding	Kifc1	exon	ENSMUSG00000079553	ProperStrand	47	1	-12.6079
chr7	19591412	19591428	protein_coding	Irf2bp1	exon	ENSMUSG00000044030	NonProperStrand	81	chr11	62416602	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-7.6148
chr4	131865377	131865509	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	chr2	158182154	158182291	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	14	-0.9625
chr18	10052129	10052151	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr18	61715371	61715387	protein_coding	Csnk1a1	utr5	ENSMUSG00000024576	NonProperStrand	35	1	-9.8862
chr4	135494991	135495007	protein_coding	Fuca1	exon	ENSMUSG00000028673	ProperStrand	16	chr5	74489543	74489676	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-6.3569
chr2	166890502	166890580	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	chr12	110874223	110874290	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	1	-4.3078
chr3	79319160	79322065	protein_coding	Fnip2	exon	ENSMUSG00000061175	ProperStrand	45	chr5	121655099	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.2899
chr12	73052925	73053015	protein_coding	Daam1	exon	ENSMUSG00000034574	ProperStrand	13	chr2	84516032	84516112	protein_coding	Tmx2	intron	ENSMUSG00000050043	ProperStrand	31	1	-17.4819
chr3	108188444	108188550	protein_coding-noncoding	Psrc1	utr5	ENSMUSG00000068744	ProperStrand	6	chr1	88247800	88247836	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	5	-20.0918
chr7	134167963	134168053	protein_coding	Maz	exon	ENSMUSG00000030678	ProperStrand	42	chr2	26494720	26494800	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.7619
chr16	5100103	5100119	protein_coding	Ppl	exon	ENSMUSG00000039457	ProperStrand	37	chr9	120038462	120038529	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.9292
chr11	69481335	69481443	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	chr10	127895550	127895568	tRNA	tRNA688-SerCGA	.	1336914	ProperStrand	71	1	-2.8992
chr12	88520708	88520733	protein_coding	Tmed8	intron	ENSMUSG00000034111	ProperStrand	22	chr16	43886793	43886877	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	3	-19.3301
chr5	28092508	28092608	protein_coding	Paxip1	exon	ENSMUSG00000002221	ProperStrand	34	chr16	23109051	23109093	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-8.4199
chr4	28799141	28862864	protein_coding	Epha7	exon	ENSMUSG00000028289	ProperStrand	6	chr12	112779200	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	2	-15.2433
chr3	90016883	90017131	protein_coding	Rps27	exon	ENSMUSG00000090733	ProperStrand	40	chr13	49779780	49779802	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-7.8233
chr13	99622854	99623365	protein_coding	Tnpo1	exon	ENSMUSG00000009470	ProperStrand	56	chrX	34622933	34623023	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-3.2962
chr6	124820503	124820522	protein_coding	Cd4	exon	ENSMUSG00000023274	ProperStrand	9	chrX	70703396	70703412	protein_coding	Haus7	exon	ENSMUSG00000031371	NonProperStrand	18	1	-18.6028
chr7	30890083	30890099	protein_coding	Zfp260	exon	ENSMUSG00000049421	ProperStrand	7	chr2	26493456	26493493	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-8.0386
chr13	21414727	21414758	miRNA	AC124460.1	.	ENSMUSG00000093647	ProperStrand	23	chr5	130295414	130295504	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-7.1500
chr11	98577062	98577521	protein_coding	Med24	exon	ENSMUSG00000017210	ProperStrand	28	chr10	90324049	90324065	protein_coding	Anks1b	intron	ENSMUSG00000058589	NonProperStrand	230	2	-18.1324
chr5	73632891	73632938	protein_coding	Fryl	intron	ENSMUSG00000090491	ProperStrand	4	chr16	23111754	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-12.0512
chr10	80642433	80643988	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr5	130295415	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	11	-7.0128
chr14	51427119	51427208	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-1.6081
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr6	120851774	120851800	protein_coding	Bid	utr5	ENSMUSG00000004446	ProperStrand	6	1	-13.3654
chr11	77996574	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	chr12	92811912	92811968	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	1	-1.7691
chr7	52309977	52309993	protein_coding	Prrg2	exon	ENSMUSG00000007837	NonProperStrand	281	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-7.6779
chr2	166853829	166853888	protein_coding	Ddx27	exon	ENSMUSG00000017999	ProperStrand	55	chr17	24857722	24857812	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-4.3258
chr15	77597977	77597993	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr4	116826700	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-2.5342
chr12	17552949	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr5	130295414	130295552	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	12	-3.8938
chr1	63613217	63614438	protein_coding	Adam23	exon	ENSMUSG00000025964	ProperStrand	59	chr19	4923089	4923179	protein_coding	Dpp3	exon	ENSMUSG00000063904	ProperStrand	36	1	-14.3766
chr19	47654368	47654395	protein_coding	Slk	utr5	ENSMUSG00000025060	ProperStrand	27	chr9	78327700	78327773	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	3	-17.8390
chr17	25321699	25321784	pseudogene	BC003965	.	ENSMUSG00000067722	ProperStrand	6	chr7	116663702	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-7.0045
chr9	21242905	21242922	protein_coding	Dnm2	intron	ENSMUSG00000033335	ProperStrand	48	chr12	88778631	88778717	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-6.9408
chr1	45875761	45876405	protein_coding	Wdr75	exon	ENSMUSG00000025995	ProperStrand	24	chr4	131908689	131908798	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-12.5699
chr4	116862572	116862662	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	chr1	89681167	89681324	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	2	-2.7585
chr8	108652699	108652736	protein_coding	Nfatc3	utr3	ENSMUSG00000031902	ProperStrand	75	chr3	96304944	96305007	tRNA	tRNA746-GlyTCC	.	1420515	ProperStrand	12	1	-16.1801
chr4	139295481	139295497	protein_coding	Pax7	utr3	ENSMUSG00000028736	ProperStrand	23	chr8	73419768	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.9417
chr11	3418175	3418274	protein_coding	Smtn	intron	ENSMUSG00000020439	ProperStrand	222	chr1	162966837	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-3.7431
chr2	172201587	172201625	protein_coding	Cstf1	exon	ENSMUSG00000027498	ProperStrand	13	chr4	131908687	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	6	-21.1000
chr11	115692585	115692602	protein_coding	Llgl2	intron	ENSMUSG00000020782	ProperStrand	62	chr17	31982698	31982728	protein_coding	Sik1	utr3	ENSMUSG00000024042	ProperStrand	55	1	-13.4253
chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	chr7	110114018	110114034	protein_coding	Olfr576	exon	ENSMUSG00000073962	NonProperStrand	79	1	-10.0660
chr3	82816757	82816775	protein_coding	Fgg	exon	ENSMUSG00000033860	NonProperStrand	321	chr19	9016860	9018507	protein_coding	Mta2	exon	ENSMUSG00000071646	ProperStrand	70	1	-9.6431
chr8	40681587	40681603	protein_coding	Msr1	intron	ENSMUSG00000025044	ProperStrand	138	chr3	109267498	109267518	protein_coding	Vav3	intron	ENSMUSG00000033721	NonProperStrand	4	1	-17.2594
chr19	8798740	8798777	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	chr8	113366288	113366353	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	3	-3.7705
chr8	10741306	10741396	DNA	Tigger5	MER2_type	chr8Tigger510741274	ProperStrand	1	chr3	7050075	7050155	LTR	IAPLTR2_Mm	ERVK	chr3IAPLTR2_Mm7049879	ProperStrand	1	1	-inf
chr7	26509163	26509253	protein_coding	Hnrnpul1	intron	ENSMUSG00000040725	ProperStrand	84	chr6	115758052	115758132	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	2	-7.9663
chr7	116663740	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	chr17	71980620	71980681	snoRNA	ENSMUSG00000093289_Snord92	.	ENSMUSG00000093289	ProperStrand	56	1	-2.6307
chr17	13814793	13814883	protein_coding	Tcte2	intron	ENSMUSG00000038347	ProperStrand	21	chr18	35714198	35714278	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-5.4554
chr9	15069885	15069901	protein_coding	Med17	exon	ENSMUSG00000031935	ProperStrand	135	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.1326
chr10	59412835	59413508	protein_coding	Ddit4	exon	ENSMUSG00000020108	ProperStrand	49	chr4	131908236	131908346	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	8	-16.5366
chrX	71589885	71589903	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr3	95980321	95980385	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-3.8052
chr1	74405627	74405658	SINE	ID_B1	B4	chr1ID_B174405586	ProperStrand	4	chr5	147646750	147646850	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	4	-inf
chr8	59048088	59048197	protein_coding	Fbxo8	exon	ENSMUSG00000038206	ProperStrand	2	chr12	92811873	92811901	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	1	-16.0322
chr18	38004881	38004913	protein_coding	Diap1	utr3	ENSMUSG00000024456	ProperStrand	77	chr9	15119632	15119674	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-5.9660
chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	chr2	130101241	130101310	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	2	-3.3773
chr2	33369892	33369910	SINE	B4A	B4	chr2B4A33369847	ProperStrand	1	chr7	133939175	133939260	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	1	-inf
chr2	146125209	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	chr17	35089182	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-3.3610
chr15	98057814	98057831	protein_coding	Olfr286	exon	ENSMUSG00000059460	NonProperStrand	1	chr17	35299532	35299642	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	NonProperStrand	14	1	-inf
chr7	91766451	91766551	protein_coding	Zfand6	intron	ENSMUSG00000030629	ProperStrand	11	chr1	88252837	88252871	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	2	-16.0161
chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	chr8	13416898	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-2.9174
chr2	126965203	126965219	protein_coding	Itpripl1	utr3	ENSMUSG00000074825	ProperStrand	22	chr19	8800377	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-5.4555
chr2	160732177	160732193	protein_coding	Emilin3	utr3	ENSMUSG00000050700	ProperStrand	9	chr11	69481335	69481427	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	4	-20.0947
chr12	113850705	113850739	protein_coding	Inf2	intron	ENSMUSG00000037679	ProperStrand	12	chr7	111487755	111487793	protein_coding	Trim12c	utr3	ENSMUSG00000057143	ProperStrand	28	1	-17.8760
chr12	32325099	32325128	protein_coding	Dus4l	utr3	ENSMUSG00000020648	ProperStrand	1	chr11	69481334	69481405	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-inf
chr4	43505684	43505721	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chrX	50622207	50622294	protein_coding	Fam122b	utr5	ENSMUSG00000036022	ProperStrand	20	1	-5.1523
chr5	108536154	108536216	protein_coding	Mtf2	utr3	ENSMUSG00000029267	ProperStrand	39	chr7	118219574	118219659	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-8.2575
chr16	4087848	4087922	protein_coding	Crebbp	exon	ENSMUSG00000022521	ProperStrand	56	chr12	17552951	17553041	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-5.2233
chr13	9833576	9833615	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr11	69483288	69483327	protein_coding-noncoding	Eif4a1	utr3	ENSMUSG00000059796	ProperStrand	68	3	-11.2032
chr15	7141682	7141782	protein_coding	Lifr	utr3	ENSMUSG00000054263	ProperStrand	64	chr11	62416603	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	5	-18.7423
chr11	6428104	6428169	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr10	127522365	127522416	snoRNA	ENSMUSG00000093245_AC131120.1	.	ENSMUSG00000093245	ProperStrand	77	6	-15.3622
chr8	125627174	125627805	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	chr11	6428038	6428105	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.0519
chr13	14709099	14709120	protein_coding	Psma2	exon	ENSMUSG00000015671	ProperStrand	26	chr15	79908954	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-7.1317
chr15	35028641	35028731	protein_coding	Stk3	intron	ENSMUSG00000022329	ProperStrand	13	chr5	73476298	73476378	protein_coding	Fryl	intron	ENSMUSG00000070733	NonProperStrand	10	1	-21.7531
chr9	119455320	119455338	protein_coding	Scn5a	intron	ENSMUSG00000032511	ProperStrand	19	chr15	34370631	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-5.7679
chr16	5026607	5026696	protein_coding	Glyr1	exon	ENSMUSG00000022536	ProperStrand	60	chr7	116663699	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-4.4300
chr3	90290928	90290994	protein_coding	Ilf2	exon	ENSMUSG00000001016	ProperStrand	28	chr11	115935746	115937022	protein_coding	Unc13d	exon	ENSMUSG00000057948	ProperStrand	89	1	-14.0684
chr7	29136635	29136654	protein_coding	Rps16	intron	ENSMUSG00000037563	ProperStrand	191	chr11	69481372	69481472	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-1.3112
chr8	82200537	82200596	protein_coding	Otud4	utr3	ENSMUSG00000036990	ProperStrand	45	chr2	26768393	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	3	-14.1827
chr15	67931264	67931285	protein_coding	Zfat	intron	ENSMUSG00000022335	ProperStrand	6	chr12	55797769	55797839	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	1	-12.4489
chr2	45169093	45169109	LINE	Lx7	L1	chr2Lx745168968	NonProperStrand	4	chr8	13416897	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-12.1048
chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	chr18	35714144	35714262	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-0.8248
chr9	20720299	20720379	protein_coding	Dnmt1	exon	ENSMUSG00000004099	ProperStrand	91	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-4.6458
chr4	118805086	118805107	protein_coding	Slc2a1	exon	ENSMUSG00000028645	ProperStrand	361	chr8	13876176	13876226	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-3.6747
chr7	147299029	147302224	protein_coding	Echs1	exon	ENSMUSG00000025465	ProperStrand	10	chr18	35716813	35716850	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-5.5279
chr8	13416895	13416912	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr8	27091218	27091234	protein_coding	4930444A02Rik	utr3	ENSMUSG00000037251	NonProperStrand	57	1	-6.5558
chr17	25777299	25777317	protein_coding	Lmf1	intron	ENSMUSG00000002279	NonProperStrand	12	chr2	29922267	29922321	protein_coding	Set	utr5	ENSMUSG00000054766	ProperStrand	167	2	-inf
chr10	62021961	62022061	protein_coding	2510003E04Rik	exon	ENSMUSG00000036955	ProperStrand	8	chr1	162965557	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-7.2483
chr18	35714143	35714162	lincRNA	Snhg4	intron	ENSMUSG00000090430	ProperStrand	270	chr19	8798767	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-2.0852
chr11	77317914	77321035	protein_coding	Git1	utr3	ENSMUSG00000011877	ProperStrand	95	chr10	90581034	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	34	-inf
chr9	92060770	92060860	LINE	L1Md_F2	L1	chr9L1Md_F292060771	ProperStrand	1	chr9	92060486	92060576	LINE	L1VL4	L1	chr9L1VL492059106	ProperStrand	1	1	-inf
chr8	13159392	13171262	protein_coding	Lamp1	exon	ENSMUSG00000031447	ProperStrand	92	chr5	130300433	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	4	-7.0794
chr4	118781573	118793040	protein_coding	Slc2a1	exon	ENSMUSG00000028645	ProperStrand	361	chr9	15119709	15119768	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-0.7040
chr11	62416574	62416606	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr8	98268283	98268538	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	1	-5.6870
chr7	117189863	117189922	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr7	25096566	25096593	protein_coding	Zfp94	intron	ENSMUSG00000074282	ProperStrand	1	1	-inf
chr16	37777391	37777408	protein_coding	Fstl1	exon	ENSMUSG00000022816	ProperStrand	179	chr9	15118258	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-2.9947
chr9	78023110	78023148	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr7	125278632	125278753	protein_coding	Smg1	utr3	ENSMUSG00000030655	ProperStrand	70	1	-5.5756
chr16	32828851	32829354	protein_coding	1700021K19Rik	exon	ENSMUSG00000035629	ProperStrand	7	chr1	192777775	192777792	protein_coding	Vash2	intron	ENSMUSG00000037568	ProperStrand	34	2	-19.0378
chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	chr4	131866168	131866237	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-0.9172
chr2	165882696	165884184	protein_coding	Ncoa3	exon	ENSMUSG00000027678	ProperStrand	58	chr15	79913288	79913345	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-3.6550
chr17	56236923	56237341	protein_coding	Hdgfrp2	exon	ENSMUSG00000002833	ProperStrand	36	chr16	23111701	23111746	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.7618
chr1	88248603	88248662	snoRNA	ENSMUSG00000064696_SNORD20	.	ENSMUSG00000064696	ProperStrand	89	chr19	8799057	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-5.0638
chr1	39634128	39634144	protein_coding	Rnf149	utr5	ENSMUSG00000048234	NonProperStrand	20	chr16	23110455	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-7.5136
chr5	8988197	8989619	protein_coding	Crot	exon	ENSMUSG00000003623	ProperStrand	4	chr16	38158157	38158226	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	1	-14.3233
chr6	50248404	50248455	protein_coding	Osbpl3	intron	ENSMUSG00000029822	NonProperStrand	31	chr16	57391652	57391760	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	1	-11.6391
chr16	17018416	17018506	protein_coding	Mapk1	exon	ENSMUSG00000063358	ProperStrand	67	chr4	131908360	131908440	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	6	-9.3323
chr2	146852315	146853078	protein_coding	Xrn2	exon	ENSMUSG00000027433	ProperStrand	48	chr4	131866155	131866245	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-4.0833
chr18	36961610	36961662	misc_RNA	Vault	.	ENSMUSG00000065145	ProperStrand	177	chr7	34987705	34987877	protein_coding	Gpi1	exon	ENSMUSG00000036427	ProperStrand	288	1	-8.0061
chr6	29324490	29324532	protein_coding	Calu	utr3	ENSMUSG00000029767	ProperStrand	47	chr5	108336363	108336463	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-5.3555
chr19	47343247	47343263	protein_coding	Sh3pxd2a	exon	ENSMUSG00000053617	ProperStrand	57	chr7	52382010	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-6.8137
chr2	101791420	101791490	protein_coding	Ldlrad3	utr3	ENSMUSG00000048058	ProperStrand	53	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.5767
chr6	75072248	75072338	LINE	L1Md_F2	L1	chr6L1Md_F275071122	ProperStrand	1	chr7	54442555	54442635	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-inf
chr15	102007780	102007830	protein_coding	Csad	utr3	ENSMUSG00000023044	ProperStrand	14	chr4	131866172	131866262	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	8	-inf
chr3	90155327	90155404	protein_coding	Gatad2b	exon	ENSMUSG00000042390	ProperStrand	21	chr17	24665468	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-7.0183
chr4	43505656	43505721	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr4	62157560	62158016	protein_coding	Bspry	exon	ENSMUSG00000028392	ProperStrand	7	1	-7.3054
chr1	194571787	194571881	snRNA	ENSMUSG00000064881_U5	.	ENSMUSG00000064881	ProperStrand	187	chr7	118219574	118219609	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-2.1427
chr10	12167846	12175206	protein_coding	Utrn	exon	ENSMUSG00000019820	ProperStrand	69	chr7	150717344	150717424	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-5.2343
chr3	17606831	17606911	LINE	L1VL2	L1	chr3L1VL217606705	NonProperStrand	1	chr3	17606575	17606665	LINE	L1VL4	L1	chr3L1VL417605634	NonProperStrand	1	1	-inf
chr6	11699563	11699617	LINE	L1_Mus4	L1	chr6L1_Mus411699451	ProperStrand	3	chr8	73302252	73302286	protein_coding	Mast3	utr3	ENSMUSG00000031833	ProperStrand	23	3	-inf
chr19	10525980	10525997	protein_coding	Syt7	utr3	ENSMUSG00000024743	NonProperStrand	17	chr8	39436369	39436386	protein_coding	Sgcz	intron	ENSMUSG00000039539	ProperStrand	46	1	-16.4243
chr11	117927670	117927686	protein_coding	Dnahc17	exon	ENSMUSG00000033987	NonProperStrand	20	chr8	98264503	98264549	protein_coding	Cnot1	intron	ENSMUSG00000036550	ProperStrand	315	1	-12.2166
chr8	8639487	8660497	protein_coding	Efnb2	exon	ENSMUSG00000001300	NonProperStrand	14	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-11.5510
chr19	46474487	46474504	protein_coding	Sufu	intron	ENSMUSG00000025231	NonProperStrand	10	chr10	23505151	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-7.3782
chr9	57376855	57378052	protein_coding	Cox5a	exon	ENSMUSG00000000088	ProperStrand	26	chr3	90292831	90292874	protein_coding	Snapin	utr3	ENSMUSG00000001018	ProperStrand	2	1	-inf
chr4	91012543	91012564	protein_coding	Elavl2	intron	ENSMUSG00000008489	ProperStrand	52	chr19	8963033	8963051	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.5173
chr2	27954905	27954923	lincRNA	F730016J06Rik	intron	ENSMUSG00000086425	NonProperStrand	21	chr11	69481366	69481432	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.1963
chr2	144199263	144199363	protein_coding	Csrp2bp	utr5	ENSMUSG00000027425	ProperStrand	32	chr11	97642952	97643078	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	5	-15.4008
chr7	152048840	152048903	protein_coding	Fgf4	utr3	ENSMUSG00000050917	ProperStrand	66	chr9	64143776	64143873	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-7.5821
chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	chr5	121655016	121655078	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-1.3705
chr7	27494796	27494876	LTR	MMETn-int	ERVK	chr7MMETn-int27493228	NonProperStrand	1	chr7	27974928	27975018	protein_coding	Snrpa	intron	ENSMUSG00000061479	NonProperStrand	1	1	-inf
chr1	73418173	73418190	LINE	L1MB3	L1	chr1L1MB373418012	ProperStrand	5	chr1	75358744	75358773	protein_coding	Des	exon	ENSMUSG00000026208	ProperStrand	2	1	-inf
chr9	44598075	44598093	protein_coding	Ift46	intron	ENSMUSG00000002031	NonProperStrand	28	chr7	116636532	116636551	protein_coding	Trim66	intron	ENSMUSG00000031026	ProperStrand	7	1	-19.2066
chr4	131908419	131908461	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr7	133835253	133835269	protein_coding	Slx1b	exon	ENSMUSG00000059772	ProperStrand	15	1	-10.0651
chr15	63969559	63969575	protein_coding	Asap1	exon	ENSMUSG00000022377	NonProperStrand	47	chr17	35804017	35804056	protein_coding	Vars2	exon	ENSMUSG00000038838	ProperStrand	19	1	-16.1828
chr5	113759429	113759496	LTR	ORR1B1-int	MaLR	chr5ORR1B1-int113759315	NonProperStrand	1	chr7	29136579	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-inf
chr6	47495724	47495814	protein_coding	Ezh2	exon	ENSMUSG00000029687	ProperStrand	40	chr7	116663634	116663714	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.2294
chr1	107743299	107743317	protein_coding	Tnfrsf11a	utr3	ENSMUSG00000026321	NonProperStrand	100	chr15	34370558	34370658	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-2.6344
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr5	36220936	36220953	protein_coding	Ablim2	intron	ENSMUSG00000029095	ProperStrand	36	1	-14.1828
chrX	71533839	71534003	protein_coding	Taz	exon	ENSMUSG00000009995	ProperStrand	59	chr11	19972508	19977222	protein_coding	Actr2	exon	ENSMUSG00000020152	ProperStrand	72	4	-20.9520
chr2	166888974	166889030	snoRNA	ENSMUSG00000077515_SNORD12	.	ENSMUSG00000077515	ProperStrand	191	chr3	123210881	123210971	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	10	-12.0752
chr6	90423726	90423781	protein_coding	Klf15	intron	ENSMUSG00000030087	ProperStrand	9	chr4	20548793	20548811	protein_coding	Nkain3	intron	ENSMUSG00000055761	ProperStrand	34	1	-17.7938
chr5	138093719	138093736	protein_coding	Agfg2	exon	ENSMUSG00000029722	ProperStrand	14	chr19	5426428	5426459	protein_coding	AI837181	exon	ENSMUSG00000047423	ProperStrand	2	1	-inf
chr15	99239684	99239784	protein_coding	Tmbim6	utr3	ENSMUSG00000023010	ProperStrand	64	chr4	131908300	131908346	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-2.5339
chr11	83317778	83317939	protein_coding	Taf15	exon	ENSMUSG00000020680	ProperStrand	60	chr13	96102591	96102681	snoRNA	ENSMUSG00000077380_SNORA68	.	ENSMUSG00000077380	ProperStrand	51	1	-13.6445
chr7	104480869	104495806	protein_coding	Kctd21	utr5	ENSMUSG00000044952	ProperStrand	2	chr3	123210915	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-9.1566
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr4	131865390	131865517	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	4	-2.6602
chr17	11963724	11963814	protein_coding	Park2	intron	ENSMUSG00000023826	ProperStrand	12	chr7	54442373	54442463	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	1	-14.8797
chr14	96988089	96988179	snoRNA	ENSMUSG00000064581_SNORA30	.	ENSMUSG00000064581	ProperStrand	146	chr4	122968584	122968664	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-4.5520
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr8	109511191	109511305	protein_coding	Sntb2	intron	ENSMUSG00000041308	ProperStrand	41	1	-8.5585
chr4	43505652	43505774	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	NonProperStrand	174	chr4	43505760	43505933	protein_coding	Ccdc107	intron	ENSMUSG00000028461	ProperStrand	69	47	-19.6203
chr6	119623547	119623591	protein_coding	Erc1	intron	ENSMUSG00000030172	ProperStrand	69	chr11	106362304	106362337	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-5.5685
chr11	78313939	78313956	protein_coding	Vtn	exon	ENSMUSG00000017344	ProperStrand	188	chr6	51859386	51859409	protein_coding	Skap2	exon	ENSMUSG00000059182	ProperStrand	4	1	-16.6493
chr6	97126345	97126413	protein_coding	Tmf1	exon	ENSMUSG00000030059	ProperStrand	33	chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	1	-11.0383
chr2	9985194	9985804	protein_coding	Atp5c1	exon	ENSMUSG00000025781	ProperStrand	138	chr3	123210853	123210933	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-0.8795
chr10	20080843	20080859	protein_coding	Fam54a	utr3	ENSMUSG00000019992	ProperStrand	232	chr2	26493365	26493465	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	9	-16.9358
chr7	117283090	117283156	protein_coding	Wee1	exon	ENSMUSG00000031016	ProperStrand	5	chr6	115757992	115758092	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-10.5899
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr18	35716672	35716762	lincRNA	Snhg4	intron	ENSMUSG00000090430	ProperStrand	270	1	-4.8415
chr3	31006665	31006703	protein_coding	Skil	intron	ENSMUSG00000027660	ProperStrand	23	chr18	35716831	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.8840
chr2	152149388	152149478	protein_coding-noncoding	Rbck1	utr3	ENSMUSG00000027466	ProperStrand	3	chr3	123210919	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-8.0648
chr7	94524696	94524714	protein_coding	Nox4	exon	ENSMUSG00000030562	ProperStrand	4	chr11	120115833	120115888	protein_coding	Bahcc1	intron	ENSMUSG00000039741	ProperStrand	118	1	-17.6418
chr2	34627863	34627953	protein_coding	Hspa5	exon	ENSMUSG00000026864	ProperStrand	181	chr3	108357272	108357352	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-2.5233
chr11	108862071	108862161	LTR	LTR16A	ERVL	chr11LTR16A108861942	NonProperStrand	1	chr11	108862240	108862320	LTR	RMER4B	ERVK	chr11RMER4B108862201	ProperStrand	1	1	-inf
chr16	85802546	85802563	protein_coding	Adamts1	exon	ENSMUSG00000022893	ProperStrand	102	chr12	106269287	106269387	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-3.1595
chrX	132673816	132673833	protein_coding	Bex4	intron	ENSMUSG00000047844	NonProperStrand	70	chr1	162967515	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-3.1934
chr17	10400667	10406335	protein_coding	Qk	utr3	ENSMUSG00000062078	ProperStrand	63	chr9	120039566	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-5.5439
chr8	108776936	108776953	lincRNA	Gm17245	intron	ENSMUSG00000067626	ProperStrand	27	chr11	60258347	60258365	protein_coding	4933439F18Rik	utr3	ENSMUSG00000018415	ProperStrand	26	1	-16.6067
chr6	146725817	146725872	protein_coding	Stk38l	utr3	ENSMUSG00000001630	ProperStrand	60	chr5	104283007	104283024	protein_coding	Aff1	utr3	ENSMUSG00000029313	ProperStrand	82	1	-12.6852
chr15	82980136	82980191	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr11	6519839	6519929	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-2.1111
chr10	82456766	82654828	protein_coding	Chst11	intron	ENSMUSG00000034612	ProperStrand	170	chr9	15119647	15119761	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	4	-4.7371
chr11	117652807	117652907	protein_coding	Tmc8	exon	ENSMUSG00000050106	ProperStrand	3	chr18	35714187	35714259	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-9.6483
chr14	33109506	33109565	protein_coding	Parg	utr3	ENSMUSG00000021911	ProperStrand	33	chr12	88778631	88778713	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-7.6905
chr11	95919636	95919691	protein_coding	Ube2z	exon	ENSMUSG00000014349	ProperStrand	41	chr17	27716428	27716446	protein_coding	Nudt3	utr3	ENSMUSG00000024213	ProperStrand	26	1	-15.7906
chr11	99082037	99086429	protein_coding	Smarce1	exon	ENSMUSG00000037935	ProperStrand	38	chr1	89673694	89673774	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-4.1129
chr2	157119950	157120991	protein_coding	Rpn2	exon	ENSMUSG00000027642	ProperStrand	363	chr4	126018097	126018158	protein_coding	Eif2c3	utr3	ENSMUSG00000028842	ProperStrand	8	1	-13.8445
chr5	52558107	52558135	protein_coding	Dhx15	intron	ENSMUSG00000029169	ProperStrand	53	chr16	23110454	23110524	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.6756
chr7	133726521	133726538	protein_coding	Cln3	exon	ENSMUSG00000030720	ProperStrand	87	chr11	62416623	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-4.4511
chr8	86782815	86784198	protein_coding	Ccdc130	exon	ENSMUSG00000004994	ProperStrand	29	chr15	101923566	101923614	protein_coding	Eif4b	exon	ENSMUSG00000058655	ProperStrand	484	1	-10.6008
chr2	90899461	90899504	protein_coding	Psmc3	exon	ENSMUSG00000002102	ProperStrand	8	chr9	15119631	15119710	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-6.5261
chr4	43563177	43563860	protein_coding	Tln1	exon	ENSMUSG00000028465	ProperStrand	101	chr4	131865901	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.0305
chr15	7823197	7834304	protein_coding	Wdr70	exon	ENSMUSG00000039828	ProperStrand	16	chr9	15130707	15130797	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	1	-11.8970
chr17	56552602	56552675	protein_coding	Ptprs	utr3	ENSMUSG00000013236	NonProperStrand	4	chr19	46137780	46137851	protein_coding	Pprc1	exon	ENSMUSG00000055491	NonProperStrand	10	1	-19.3291
chr5	108334197	108336485	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	chr14	52829460	52829550	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	2	-1.3915
chr7	52382144	52382364	protein_coding	Rpl13a	exon	ENSMUSG00000074129	ProperStrand	269	chr10	23505151	23505255	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-1.0480
chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr9	122075466	122075482	protein_coding	Snrk	exon	ENSMUSG00000038145	NonProperStrand	97	1	-5.5106
chr2	120352514	120352564	protein_coding	Zfp106	exon	ENSMUSG00000027288	ProperStrand	199	chr17	35299564	35299597	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-2.5736
chr3	136539674	136539754	protein_coding	Ppp3ca	intron	ENSMUSG00000028161	ProperStrand	45	chr2	130101996	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-5.9209
chr15	54847567	54847613	protein_coding	Taf2	utr3	ENSMUSG00000037343	ProperStrand	18	chr12	17552949	17553031	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-7.4836
chr9	118484192	118484281	protein_coding	Golga4	intron	ENSMUSG00000038708	ProperStrand	95	chr17	24857721	24857742	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.5682
chr4	57706987	57707003	protein_coding	Palm2	intron	ENSMUSG00000090053	NonProperStrand	187	chr17	35089181	35089229	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	2	-5.6858
chr11	29442428	29444278	protein_coding	Mtif2	exon	ENSMUSG00000020459	ProperStrand	20	chr1	63225578	63225658	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-8.8769
chr8	73891680	73891741	protein_coding	Use1	exon	ENSMUSG00000002395	ProperStrand	8	chr14	106505903	106505920	protein_coding	Trim52	utr5	ENSMUSG00000022113	NonProperStrand	10	1	-19.4909
chr7	29136027	29137200	protein_coding	Rps16	intron	ENSMUSG00000037563	ProperStrand	191	chr2	26493366	26493488	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-3.2022
chr17	33786732	33786805	protein_coding	Hnrnpm	exon	ENSMUSG00000059208	ProperStrand	56	chr11	6428103	6428163	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.3176
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr13	22088484	22088507	tRNA	tRNA975-GlnCTG	.	1937183	ProperStrand	4	1	-14.4758
chrX	104268540	104268630	LINE	L1_Mur3	L1	chrXL1_Mur3104267362	ProperStrand	1	chrX	104268811	104268901	LINE	L1_Mur3	L1	chrXL1_Mur3104268805	ProperStrand	1	1	-inf
chr10	28229972	28229989	protein_coding	Ptprk	intron	ENSMUSG00000019889	ProperStrand	45	chr11	77996588	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-6.6615
chr3	82707847	82707863	antisense	4930564K09Rik	.	ENSMUSG00000086273	ProperStrand	48	chr7	117190018	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.7442
chr1	173341933	173341949	protein_coding	Usf1	utr5	ENSMUSG00000026641	NonProperStrand	144	chr11	106362336	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-4.1544
chr7	151765212	151765228	antisense	Gm10574	.	ENSMUSG00000073778	ProperStrand	357	chrX	71516340	71517007	protein_coding	Rpl10	exon	ENSMUSG00000008682	ProperStrand	71	1	-9.4026
chr9	37457641	37457731	protein_coding	Tbrg1	exon	ENSMUSG00000011114	ProperStrand	56	chr5	121655063	121655143	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.8765
chr11	114568997	114569779	protein_coding	Ttyh2	exon	ENSMUSG00000034714	ProperStrand	23	chr15	79913288	79913329	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-5.4333
chr2	112102666	112102756	protein_coding	Nop10	utr3	ENSMUSG00000027133	ProperStrand	10	chr11	97642993	97643073	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-9.7218
chr1	162966812	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	chr10	110918549	110918693	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	17	-4.6644
chr14	45949538	45968559	protein_coding	Psmc6	utr3	ENSMUSG00000021832	ProperStrand	326	chr18	35714142	35714274	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	3	-2.7028
chr10	62341769	62341869	protein_coding	Tet1	exon	ENSMUSG00000047146	ProperStrand	286	chr11	68887044	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-1.4646
chr5	130718107	130718841	protein_coding	0610007L01Rik	utr3	ENSMUSG00000053094	ProperStrand	39	chr7	116664819	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	5	-14.4167
chr2	25131836	25133159	protein_coding	Anapc2	exon	ENSMUSG00000026965	ProperStrand	15	chr1	162968253	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-9.6175
chr6	96322858	96322874	protein_coding	Fam19a1	intron	ENSMUSG00000059187	NonProperStrand	60	chr11	48615536	48615599	snoRNA	ENSMUSG00000064725_Snord96a	.	ENSMUSG00000064725	ProperStrand	89	1	-12.5220
chr13	34985686	34986325	protein_coding	Prpf4b	exon	ENSMUSG00000021413	ProperStrand	50	chr7	148634776	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	3	-10.4446
chr6	124666914	124666942	protein_coding	Phb2	utr3	ENSMUSG00000004264	ProperStrand	43	chr7	116663634	116663724	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-5.3514
chr6	86731276	86731292	protein_coding	Anxa4	intron	ENSMUSG00000029994	ProperStrand	47	chrX	71589890	71589907	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	1	-10.6406
chr6	122678474	122682449	protein_coding	Slc2a3	exon	ENSMUSG00000003153	ProperStrand	682	chr11	69481330	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	8	-4.4355
chr9	38531513	38531533	protein_coding	Vwa5a	exon	ENSMUSG00000023186	ProperStrand	9	chr19	10701211	10701677	protein_coding	Ddb1	exon	ENSMUSG00000024740	ProperStrand	304	1	-13.9474
chr14	52605698	52605783	protein_coding	Arhgef40	intron	ENSMUSG00000004562	ProperStrand	5	chr2	179915863	179915885	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	1	-14.8584
chr18	44580968	44581022	protein_coding	Dcp2	utr3	ENSMUSG00000024472	ProperStrand	44	chr2	26767775	26767807	snoRNA	ENSMUSG00000064829_SNORD36	.	ENSMUSG00000064829	ProperStrand	98	2	-19.9414
chr2	71695335	71695435	protein_coding-noncoding	Itga6	utr5	ENSMUSG00000027111	ProperStrand	8	chr1	162966214	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	2	-18.5889
chr1	60383918	60384008	protein_coding	Nbeal1	intron	ENSMUSG00000073664	ProperStrand	20	chr4	131908275	131908355	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.2521
chrX	155991698	155991714	protein_coding	A830080D01Rik	exon	ENSMUSG00000044150	NonProperStrand	2	chr15	82980086	82980226	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-14.5989
chr7	17007799	17007840	protein_coding	Zc3h4	exon	ENSMUSG00000059273	ProperStrand	95	chr4	131866639	131866672	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	1	-8.1856
chr11	23178856	23178902	protein_coding	Xpo1	exon	ENSMUSG00000020290	ProperStrand	123	chr9	120039588	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	4	-7.8138
chr7	52116509	52116526	protein_coding	Pnkp	intron	ENSMUSG00000002963	NonProperStrand	7	chr14	20570525	20570559	protein_coding	Nid2	utr5	ENSMUSG00000021806	ProperStrand	372	1	-14.0835
chrX	96143870	96143890	protein_coding	Yipf6	utr3	ENSMUSG00000047694	ProperStrand	10	chr4	131908809	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-7.3579
chr4	14820640	14820656	protein_coding	Tmem55a	intron	ENSMUSG00000028221	NonProperStrand	9	chr6	120175190	120181576	protein_coding	B4galnt3	exon	ENSMUSG00000041372	ProperStrand	36	1	-18.0731
chr10	79493538	79493554	protein_coding	Hmha1	exon	ENSMUSG00000035697	NonProperStrand	23	chr7	117190018	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-5.1578
chr14	33153227	33153832	protein_coding	Ogdhl	exon	ENSMUSG00000021913	ProperStrand	182	chr7	52714530	52714577	protein_coding	Ftl1	exon	ENSMUSG00000050708	ProperStrand	807	1	-5.9196
chr2	167925820	167925837	protein_coding	Pard6b	utr3	ENSMUSG00000044641	ProperStrand	5	chr11	97643012	97643092	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-7.3581
chr10	75969280	75969334	protein_coding	Mcm3ap	exon	ENSMUSG00000001150	ProperStrand	95	chr1	152268927	152269668	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	2	-12.7485
chr8	113521573	113521651	protein_coding	Ddx19a	utr5	ENSMUSG00000015023	ProperStrand	21	chr11	72893112	72893212	protein_coding	1200014J11Rik	utr3	ENSMUSG00000020783	ProperStrand	11	1	-18.6542
chr12	111930936	111931007	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr7	52381972	52382009	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	3	-5.5164
chrX	19868661	19868677	protein_coding	Slc9a7	exon	ENSMUSG00000037341	ProperStrand	17	chr13	49779679	49779748	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-9.5589
chr2	25312429	25313191	protein_coding	Clic3	exon	ENSMUSG00000015093	ProperStrand	79	chr11	102266228	102266367	protein_coding	Slc25a39	exon	ENSMUSG00000018677	ProperStrand	35	1	-13.8549
chr5	116048786	116049082	protein_coding	Gcn1l1	exon	ENSMUSG00000041638	ProperStrand	408	chr11	62416616	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-1.7339
chr14	19101598	19101661	protein_coding	Rpl15	exon	ENSMUSG00000012405	ProperStrand	145	chr3	69121012	69121028	protein_coding	Ppm1l	utr5	ENSMUSG00000027784	ProperStrand	32	1	-12.8125
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr13	73957692	73957709	protein_coding	Nkd2	utr3	ENSMUSG00000021567	NonProperStrand	10	1	-8.0457
chr8	116161881	116161933	protein_coding	Mon1b	exon	ENSMUSG00000078908	ProperStrand	12	chr4	131908688	131908752	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	8	-20.8727
chr8	114238182	114238267	protein_coding	Bcar1	exon	ENSMUSG00000031955	ProperStrand	44	chr5	111121109	111121199	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-7.0506
chr10	23042938	23069569	protein_coding	Eya4	utr5	ENSMUSG00000010461	NonProperStrand	21	chr5	136410218	136410295	protein_coding	Ywhag	utr5	ENSMUSG00000051391	ProperStrand	142	1	-13.7143
chr1	12761311	12761361	protein_coding	Sulf1	intron	ENSMUSG00000016918	ProperStrand	22	chr3	88715213	88715230	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-9.2541
chr13	63616097	63616113	protein_coding	Ptch1	intron	ENSMUSG00000021466	NonProperStrand	118	chr11	68886975	68886997	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-2.9032
chr3	97551642	97551662	protein_coding	Pde4dip	intron	ENSMUSG00000038170	ProperStrand	25	chr1	162966812	162966836	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-8.0092
chr11	58682475	58682491	protein_coding	2810021J22Rik	utr5	ENSMUSG00000020491	ProperStrand	162	chr4	116827120	116827161	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-5.0913
chr9	65756911	65756928	protein_coding	Csnk1g1	utr5	ENSMUSG00000032384	ProperStrand	31	chr16	20692898	20692929	protein_coding	Eif4g1	utr3	ENSMUSG00000045983	ProperStrand	199	1	-12.2427
chr16	3902955	3903045	protein_coding	Nat15	intron	ENSMUSG00000005982	ProperStrand	8	chr1	88247835	88247878	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	7	-19.5090
chr11	68606723	68610876	protein_coding	Myh10	exon	ENSMUSG00000020900	ProperStrand	91	chr7	148634702	148634782	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-5.5175
chr16	57391756	57391792	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr7	117189864	117189954	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	6	-9.2108
chr7	25288639	25288723	protein_coding	Cadm4	utr3	ENSMUSG00000054793	ProperStrand	6	chr5	74489543	74489633	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-8.4105
chr12	84988513	84988533	protein_coding	Rbm25	intron	ENSMUSG00000010608	ProperStrand	42	chr1	162967490	162967560	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-6.9524
chr11	20012670	20012691	protein_coding	Actr2	intron	ENSMUSG00000020152	NonProperStrand	17	chr15	98350145	98350229	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-7.2611
chr4	132750365	132750421	protein_coding	Wasf2	exon	ENSMUSG00000028868	ProperStrand	56	chr8	4295064	4295164	protein_coding	Elavl1	intron	ENSMUSG00000040028	ProperStrand	39	1	-14.3148
chr1	134018692	134018903	protein_coding	Cdk18	exon	ENSMUSG00000026437	ProperStrand	51	chr18	84985010	84985029	protein_coding	Gm17266	intron	ENSMUSG00000092153	ProperStrand	1	1	-inf
chr9	78023109	78023157	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr3	96970488	96971956	protein_coding	Acp6	exon	ENSMUSG00000028093	ProperStrand	19	1	-8.1798
chr11	5429661	5429772	protein_coding	Ccdc117	utr3	ENSMUSG00000020482	ProperStrand	13	chr17	23890162	23890206	protein_coding	Flywch1	utr3	ENSMUSG00000040097	ProperStrand	15	1	-20.0385
chr6	33788992	33789019	protein_coding	Exoc4	exon	ENSMUSG00000029763	ProperStrand	120	chr6	87800946	87800962	protein_coding	Cnbp	utr5	ENSMUSG00000030057	NonProperStrand	2	1	-inf
chr14	67634614	67634646	protein_coding	Ppp2r2a	utr3	ENSMUSG00000022052	ProperStrand	45	chr5	130300460	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-5.2198
chr19	9052121	9052445	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	chr3	95980330	95980410	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	5	-13.7157
chr11	96146302	96146320	protein_coding	Hoxb7	utr5	ENSMUSG00000038721	NonProperStrand	7	chr7	29136525	29136573	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-6.5022
chr14	124243064	124243085	protein_coding	Itgbl1	exon	ENSMUSG00000032925	ProperStrand	159	chr16	23110454	23110530	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-0.9967
chr10	85517996	85518012	protein_coding	Syn3	utr3	ENSMUSG00000059602	NonProperStrand	40	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-5.9954
chr12	17552965	17553057	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr5	92485086	92485213	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	6	-8.6106
chr17	35142447	35142537	protein_coding	Vars	exon	ENSMUSG00000007029	ProperStrand	121	chr2	158205280	158205360	snoRNA	ENSMUSG00000064585_SNORA71	.	ENSMUSG00000064585	ProperStrand	418	1	-8.0231
chr18	38358081	38358105	protein_coding	Pcdh1	exon	ENSMUSG00000051375	ProperStrand	19	chr15	79913288	79913352	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-5.8137
chr10	61161048	61161170	protein_coding	Tysnd1	exon	ENSMUSG00000020087	ProperStrand	54	chr1	132742958	132742975	protein_coding	Pigr	exon	ENSMUSG00000026417	NonProperStrand	48	3	-20.1064
chr11	62416575	62416641	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	chr11	97850276	97850313	tRNA	tRNA1432-CysGCA	.	1787210	ProperStrand	31	2	-10.4887
chr17	15612863	15612924	protein_coding	Psmb1	utr3	ENSMUSG00000014769	ProperStrand	19	chr11	68887037	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	2	-10.4128
chr4	140273019	140273050	protein_coding	Rcc2	exon	ENSMUSG00000040945	ProperStrand	228	chr5	74489642	74489676	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	6	-10.2387
chr12	112779228	112779283	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	chr7	51505222	51505310	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	3	-2.2090
chr19	52767685	52767775	SINE	B4A	B4	chr19B4A52767495	NonProperStrand	1	chr17	18727617	18727697	protein_coding	Vmn2r96	intron	ENSMUSG00000091679	ProperStrand	1	1	-inf
chr4	67684238	67684255	lincRNA	Gm11751	intron	ENSMUSG00000086364	NonProperStrand	11	chr11	98878344	98878371	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-9.7219
chr8	77361458	77361478	LINE	Lx6	L1	chr8Lx677360211	ProperStrand	1	chr7	148634765	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-inf
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr19	46022236	46022252	protein_coding	9130011E15Rik	intron	ENSMUSG00000039901	ProperStrand	129	1	-7.3773
mmu-miR-2137	1	20	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	chr10	117227045	117227061	protein_coding	Nup107	exon	ENSMUSG00000052798	NonProperStrand	66	1	-11.3641
chr8	85689747	85790030	protein_coding	Tbc1d9	exon	ENSMUSG00000031709	ProperStrand	66	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	4	-11.4794
chr11	68067261	68067277	protein_coding	Ntn1	intron	ENSMUSG00000020902	NonProperStrand	194	chr4	106327108	106327141	protein_coding	Pars2	exon	ENSMUSG00000043572	ProperStrand	6	1	-15.7125
chr10	83990151	83990221	protein_coding	Ckap4	utr3	ENSMUSG00000046841	ProperStrand	60	chr4	131908689	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-2.3640
chr16	23111373	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	chr11	6519810	6519946	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	27	-6.0417
chr8	27142221	27142237	protein_coding	Hook3	utr3	ENSMUSG00000037234	NonProperStrand	7	chr17	28023311	28023327	protein_coding	Uhrf1bp1	exon	ENSMUSG00000039512	NonProperStrand	14	1	-inf
chr8	24301550	24301583	protein_coding	Agpat6	utr5	ENSMUSG00000031545	NonProperStrand	4	chr2	26493366	26493455	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	NonProperStrand	10	1	-19.3291
chr12	68761100	68761180	LTR	LTRIS_Mm	ERV1	chr12LTRIS_Mm68761038	ProperStrand	1	chr12	68761801	68761891	LTR	LTRIS_Mm	ERV1	chr12LTRIS_Mm68761633	ProperStrand	1	1	-inf
chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr7	16524136	16524218	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	1	-3.0405
chr3	153933541	153933558	protein_coding	Slc44a5	utr3	ENSMUSG00000028360	NonProperStrand	33	chr10	90581035	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-5.9768
chr12	111932368	111932438	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr18	69516975	69517041	protein_coding	Tcf4	intron	ENSMUSG00000053477	ProperStrand	13	1	-11.3695
chr5	143874599	143874615	protein_coding	Rnf216	utr5	ENSMUSG00000045078	NonProperStrand	29	chr3	68889108	68889198	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-4.6246
chr15	102076417	102076540	protein_coding	Rarg	intron	ENSMUSG00000001288	ProperStrand	156	chr8	129600574	129600605	protein_coding	Pard3	intron	ENSMUSG00000025812	ProperStrand	44	1	-12.0217
chr17	36949545	36949562	protein_coding	H2-M10.6	exon	ENSMUSG00000037130	NonProperStrand	1	chr16	57391634	57391723	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	1	-inf
chr8	125627148	125627818	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	chrX	92221203	92221219	protein_coding	Spin4	exon	ENSMUSG00000071722	NonProperStrand	14	1	-13.5793
chr18	38062784	38062801	protein_coding	Diap1	exon	ENSMUSG00000024456	ProperStrand	77	chr1	162965528	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.8297
chr15	64309170	64309189	LINE	L1MB8	L1	chr15L1MB864308791	ProperStrand	1	chr10	75398678	75398988	protein_coding	Mmp11	intron	ENSMUSG00000000901	ProperStrand	24	1	-inf
chr4	78496346	78496436	LTR	MTA_Mm	MaLR	chr4MTA_Mm78496350	NonProperStrand	1	chr15	72824961	72825041	protein_coding	Trappc9	intron	ENSMUSG00000047921	ProperStrand	44	1	-inf
chr10	125906454	125906544	LTR	RMER13A	ERVK	chr10RMER13A125906304	ProperStrand	1	chr10	125906099	125906179	Simple_repeat	(CA)n	Simple_repeat	chr10(CA)n125905953	ProperStrand	1	1	-inf
chr7	29171540	29171558	protein_coding	Med29	utr3	ENSMUSG00000003444	NonProperStrand	134	chr2	26493366	26493472	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-2.3149
chr2	32088614	32088630	lincRNA	Gm13610	exon	ENSMUSG00000086216	ProperStrand	3	chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	1	-14.9660
chr2	174397767	174397857	DNA	RMER30	MER1_type	chr2RMER30174397780	NonProperStrand	1	chr2	174397904	174397984	DNA	RMER30	MER1_type	chr2RMER30174397911	NonProperStrand	1	1	-inf
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr1	36990892	36990909	protein_coding	Tmem131	intron	ENSMUSG00000026116	ProperStrand	129	1	-4.4216
chrX	93136011	93136027	protein_coding	Las1l	exon	ENSMUSG00000057421	ProperStrand	248	chr11	62416600	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-2.5431
chr7	52382752	52382832	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	chr12	106269284	106269429	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	15	-9.3335
chr8	13416895	13416912	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr9	20918701	20918717	protein_coding	Tyk2	exon	ENSMUSG00000032175	ProperStrand	29	1	-7.9068
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr6	145168594	145168656	protein_coding	Kras	utr3	ENSMUSG00000030265	ProperStrand	3	1	-13.2786
chr17	56420197	56420277	protein_coding	Plin3	exon	ENSMUSG00000024197	ProperStrand	23	chr17	24857817	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-6.8098
chr9	78023175	78023203	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr4	116266016	116266036	protein_coding	Gpbp1l1	utr3	ENSMUSG00000034042	ProperStrand	12	1	-9.1258
chr1	181713157	181714226	protein_coding	Ahctf1	exon	ENSMUSG00000026491	NonProperStrand	4	chr11	6428060	6428155	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-8.6824
chr1	95468382	95468399	protein_coding	Farp2	intron	ENSMUSG00000034066	NonProperStrand	8	chr16	23111690	23111754	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.6662
chr17	46888629	46888646	protein_coding	Cnpy3	intron	ENSMUSG00000023973	ProperStrand	85	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.6570
chr4	116827858	116827892	snoRNA	ENSMUSG00000064751_SNORD46	.	ENSMUSG00000064751	ProperStrand	132	chr7	29136589	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-2.2512
chr9	15118247	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	chr11	69482354	69482498	snoRNA	ENSMUSG00000089542_snoU6-77	.	ENSMUSG00000089542	ProperStrand	138	2	-3.6442
chr4	99577397	99577413	protein_coding	Itgb3bp	intron	ENSMUSG00000028549	ProperStrand	55	chr4	131908236	131908319	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-4.5191
chr13	6604294	6620265	protein_coding	Pfkp	exon	ENSMUSG00000021196	ProperStrand	197	chr17	35089182	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	3	-8.1256
chr2	24657199	24657231	protein_coding	Ehmt1	intron	ENSMUSG00000036893	ProperStrand	45	chr16	23111775	23111828	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.3757
chr5	114698076	114698117	protein_coding	Acacb	intron	ENSMUSG00000042010	ProperStrand	7	chr6	115757992	115758086	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-9.8502
chr2	12941437	12941454	LTR	MTE2a	MaLR	chr2MTE2a12941159	NonProperStrand	42	chr9	44567020	44567039	protein_coding	Arcn1	exon	ENSMUSG00000032096	ProperStrand	35	1	-15.1320
chr17	81344133	81344150	protein_coding	Tmem178	exon	ENSMUSG00000024245	ProperStrand	67	chr7	123307625	123307670	protein_coding	Plekha7	exon	ENSMUSG00000045659	ProperStrand	66	1	-12.8997
chr6	115757123	115757847	protein_coding	Rpl32	exon	ENSMUSG00000057841	ProperStrand	137	chr2	32818804	32818878	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-3.8905
chr3	157584417	157584437	protein_coding	Cth	intron	ENSMUSG00000028179	ProperStrand	14	chr8	32260343	32260425	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-7.5228
chr13	73952292	73952420	protein_coding	Slc12a7	utr3	ENSMUSG00000017756	ProperStrand	80	chr11	62417003	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-5.4792
chr18	57400307	57400324	protein_coding	Megf10	exon	ENSMUSG00000024593	ProperStrand	143	chr9	40611705	40611752	snoRNA	ENSMUSG00000075876_Snord14c	.	ENSMUSG00000075876	ProperStrand	104	1	-10.4652
chr10	122002949	122003029	LINE	L1Md_F2	L1	chr10L1Md_F2122002095	NonProperStrand	23	chr12	68762118	68762208	LINE	L1_Mus2	L1	chr12L1_Mus268762115	NonProperStrand	3	1	-inf
chr17	31243117	31245322	protein_coding	Abcg1	exon	ENSMUSG00000024030	ProperStrand	36	chr11	77995188	77995239	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	6	-inf
chr2	29557979	29557996	protein_coding	Rapgef1	exon	ENSMUSG00000039844	ProperStrand	58	chr4	131908357	131908451	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.4677
chr17	84762677	84762777	protein_coding	Thada	intron	ENSMUSG00000024251	ProperStrand	47	chr2	158182156	158182206	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-5.4782
chr9	77807466	77807544	protein_coding	Elovl5	intron	ENSMUSG00000032349	ProperStrand	32	chr4	131908686	131908720	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.1812
chr12	112534737	112534753	protein_coding	Cdc42bpb	intron	ENSMUSG00000021279	ProperStrand	128	chr2	158457348	158457365	protein_coding	Actr5	exon	ENSMUSG00000037761	NonProperStrand	94	1	-10.8898
chrX	34337151	34337200	protein_coding	Slc25a5	exon	ENSMUSG00000016319	ProperStrand	55	chr2	120802957	120802974	protein_coding	Tmem62	utr5	ENSMUSG00000054484	ProperStrand	6	1	-17.9678
chr16	59927249	59927265	protein_coding	Epha6	intron	ENSMUSG00000055540	NonProperStrand	14	chr2	32818883	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-8.3901
chr4	135750827	135750845	protein_coding	E2f2	utr3	ENSMUSG00000018983	ProperStrand	3	chr17	28023311	28023327	protein_coding	Uhrf1bp1	exon	ENSMUSG00000039512	NonProperStrand	14	1	-inf
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr2	50029211	50044239	protein_coding	Lypd6	exon	ENSMUSG00000050447	NonProperStrand	14	1	-11.5511
chr6	146552387	146552474	protein_coding	Tm7sf3	exon	ENSMUSG00000040234	ProperStrand	43	chr11	68887045	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-4.7813
chr17	35987468	35987520	protein_coding	Mdc1	exon	ENSMUSG00000061607	ProperStrand	85	chrX	34622906	34622949	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	3	-6.7142
chr10	79756503	79756593	protein_coding	Rps15	exon	ENSMUSG00000063457	ProperStrand	119	chr11	69483197	69483277	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.3734
chr3	128188000	128188080	LINE	Lx3C	L1	chr3Lx3C128187610	ProperStrand	1	chr3	114967035	114967125	LTR	MTA_Mm	MaLR	chr3MTA_Mm114966814	NonProperStrand	1	1	-inf
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr10	90580845	90580930	protein_coding	Slc25a3	exon	ENSMUSG00000061904	ProperStrand	74	3	-12.7820
chr9	40610004	40610053	protein_coding	Hspa8	utr5	ENSMUSG00000015656	ProperStrand	798	chr11	3426352	3426368	protein_coding	Smtn	exon	ENSMUSG00000020439	ProperStrand	222	1	-5.5540
chr2	62155976	62155994	protein_coding	Slc4a10	intron	ENSMUSG00000026904	ProperStrand	40	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-8.0450
chr5	24409266	24409304	protein_coding	Prkag2	intron	ENSMUSG00000028944	ProperStrand	6	chr14	31827478	31827515	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-11.6881
chr9	104083440	104084413	protein_coding	Dnajc13	exon	ENSMUSG00000032560	ProperStrand	60	chr17	39985460	39985499	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-5.9321
chr2	26494811	26494893	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr7	144432767	144432783	protein_coding	Ebf3	intron	ENSMUSG00000010476	NonProperStrand	8	3	-20.1694
chr9	44614730	44614830	protein_coding	Mll1	utr3	ENSMUSG00000002028	ProperStrand	151	chr12	112779238	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-3.0556
chr2	91770115	91770247	protein_coding	Mdk	utr3	ENSMUSG00000027239	ProperStrand	56	chr11	97642952	97642979	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.5902
chr7	54443681	54443771	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	chr15	79908950	79909021	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-2.1884
chr19	23215858	23215874	protein_coding	Klf9	utr5	ENSMUSG00000033863	ProperStrand	83	chr14	98302394	98302412	protein_coding	Dach1	utr3	ENSMUSG00000055639	NonProperStrand	7	1	-17.0452
chr4	116230385	116230401	protein_coding	Gpbp1l1	utr5	ENSMUSG00000034042	NonProperStrand	106	chr11	62416951	62416992	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-4.9337
chr4	138931842	138931887	protein_coding	C230096C10Rik	utr3	ENSMUSG00000078517	ProperStrand	69	chr10	107800796	107800857	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	1	-7.7913
chr5	37209844	37209865	protein_coding	Man2b2	exon	ENSMUSG00000029119	ProperStrand	33	chr19	8798740	8798798	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-5.9705
chr14	56159295	56159311	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	chr4	116827121	116827187	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	2	-7.8138
chr12	102185405	102186693	protein_coding	Ccdc88c	exon	ENSMUSG00000021182	ProperStrand	151	chr4	131908357	131908410	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-2.4074
chr2	27389357	27390327	protein_coding	Wdr5	exon	ENSMUSG00000026917	ProperStrand	81	chr15	34370546	34370625	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-5.1905
chr17	30933173	30933190	protein_coding	Dnahc8	intron	ENSMUSG00000033826	NonProperStrand	40	chr7	117189932	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	7	-inf
chr16	23111448	23111505	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	NonProperStrand	38	chr2	26494790	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	NonProperStrand	27	1	-15.8567
chr12	52904809	52904844	protein_coding	Hectd1	exon	ENSMUSG00000035247	ProperStrand	41	chr1	89673539	89673629	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-3.9691
chr13	94992110	94992150	protein_coding	Scamp1	intron	ENSMUSG00000021687	ProperStrand	9	chr18	35716697	35716787	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-18.5284
chr17	6960266	6963838	protein_coding	Ezr	exon	ENSMUSG00000052397	ProperStrand	126	chr7	116664845	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.3747
chr14	70138171	70138188	lincRNA	Gm16867	intron	ENSMUSG00000085092	ProperStrand	11	chr16	23110840	23110890	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-4.7202
chr1	169297597	169297629	protein_coding	Aldh9a1	exon	ENSMUSG00000026687	ProperStrand	58	chr11	62416594	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-5.2322
chr12	87365377	87365422	protein_coding	Ttll5	intron	ENSMUSG00000012609	ProperStrand	23	chr14	33005038	33005081	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	2	-9.5825
chr1	93263063	93263079	protein_coding	Fam132b	exon	ENSMUSG00000047443	NonProperStrand	98	chr7	116664822	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-3.2095
chr3	146127741	146127758	protein_coding	Ctbs	utr3	ENSMUSG00000028189	ProperStrand	6	chr5	141091438	141091455	protein_coding	Lfng	utr3	ENSMUSG00000029570	ProperStrand	2	1	-inf
chr7	3657460	3657495	protein_coding	Rps9	exon	ENSMUSG00000006333	ProperStrand	87	chr2	26494708	26494802	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.4560
chr11	23191507	23191575	protein_coding	Xpo1	exon	ENSMUSG00000020290	ProperStrand	123	chr6	94776857	94776877	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	1	-7.6672
chr3	97471247	97471265	protein_coding	Prkab2	intron	ENSMUSG00000038205	NonProperStrand	4	chr4	131865855	131865917	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.0048
chr18	10052133	10052155	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr7	146684406	146684425	protein_coding	Inpp5a	intron	ENSMUSG00000025477	ProperStrand	166	1	-6.7755
chr14	56159295	56159314	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	chr2	26494710	26494842	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	3	-3.6853
chr7	125696222	125696293	protein_coding	Tmc7	exon	ENSMUSG00000042246	ProperStrand	3	chr7	148634773	148634837	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-17.1385
chr2	179906858	179907566	protein_coding	Adrm1	exon	ENSMUSG00000039041	ProperStrand	27	chr3	123210854	123210915	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.4658
chr12	88488443	88496424	protein_coding	Pomt2	exon	ENSMUSG00000034126	NonProperStrand	331	chr1	162968442	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-2.8558
chr17	51879044	51879130	protein_coding	Satb1	utr3	ENSMUSG00000023927	ProperStrand	62	chr19	8799828	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-4.8835
chr10	86166299	86166322	protein_coding	Hsp90b1	exon	ENSMUSG00000020048	ProperStrand	396	chr17	71980621	71980680	snoRNA	ENSMUSG00000093289_Snord92	.	ENSMUSG00000093289	ProperStrand	56	1	-9.6723
chr9	108416061	108416131	protein_coding	Qars	exon	ENSMUSG00000032604	ProperStrand	16	chr11	62418016	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-8.2040
chr1	72272869	72272949	snRNA	ENSMUSG00000075752_U2	.	ENSMUSG00000075752	ProperStrand	535	chr17	24856620	24856710	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-2.3371
chr12	67285563	67285653	SINE	B1_Mus1	Alu	chr12B1_Mus167285573	NonProperStrand	1	chr12	67285379	67285459	SINE	B3A	B2	chr12B3A67285355	NonProperStrand	1	1	-inf
chr2	157968890	157972056	protein_coding	Tgm2	utr5	ENSMUSG00000037820	ProperStrand	44	chr2	32999533	32999551	protein_coding	Ralgps1	intron	ENSMUSG00000038831	ProperStrand	75	1	-13.4946
chr5	54389949	54389965	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	chr9	15119649	15119767	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-0.7734
chr9	63066908	63066926	protein_coding	Map2k5	intron	ENSMUSG00000058444	NonProperStrand	79	chr2	89368462	89368478	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	1	-9.8059
chr19	10630200	10630217	protein_coding	Tmem216	utr5	ENSMUSG00000024667	ProperStrand	27	chr4	131908753	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.4692
chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	chr17	27559700	27559717	protein_coding	Grm4	utr3	ENSMUSG00000063239	ProperStrand	147	2	-12.3060
chr5	77388494	77390152	protein_coding	Paics	exon	ENSMUSG00000029247	ProperStrand	78	chr5	108333573	108333642	snoRNA	ENSMUSG00000064453_Snord21	.	ENSMUSG00000064453	ProperStrand	201	2	-16.3300
chr7	66578024	66578104	LINE	L1_Mus1	L1	chr7L1_Mus166577915	NonProperStrand	1	chr8	61777703	61777793	LINE	Lx7	L1	chr8Lx761775849	NonProperStrand	1	1	-inf
chr12	88912985	88913005	protein_coding	Gm2022	intron	ENSMUSG00000071217	NonProperStrand	57	chr5	130295414	130295470	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-5.3484
chr10	74773060	74773160	protein_coding	Specc1l	utr3	ENSMUSG00000033444	ProperStrand	36	chr10	80641693	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	1	-8.5724
chr11	6328376	6329127	protein_coding	H2afv	exon	ENSMUSG00000041126	ProperStrand	4	chr11	69483135	69483196	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-7.8378
chr11	51799951	51800047	protein_coding	Ube2b	utr3	ENSMUSG00000020390	NonProperStrand	2	chr17	39985619	39985646	pseudogene	AY036118	.	ENSMUSG00000045999	ProperStrand	57	1	-20.8877
chr15	12089355	12089404	protein_coding	Zfr	exon	ENSMUSG00000022201	ProperStrand	48	chr17	24650206	24650273	protein_coding	Traf7	exon	ENSMUSG00000052752	ProperStrand	28	3	-19.4636
chrX	131221702	131221720	protein_coding	Armcx4	utr5	ENSMUSG00000049804	ProperStrand	15	chr1	162965980	162966036	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-6.3018
chr13	8766291	8766308	protein_coding	Adarb2	utr3	ENSMUSG00000052551	ProperStrand	292	chr15	34370545	34370676	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-1.0043
chr9	81949791	81949813	protein_coding	Mei4	intron	ENSMUSG00000043289	NonProperStrand	42	chr3	95980322	95980410	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-7.5688
chr9	83678799	83681879	protein_coding	Elovl4	exon	ENSMUSG00000032262	ProperStrand	159	chr7	151239660	151239677	protein_coding	Shank2	intron	ENSMUSG00000037541	NonProperStrand	17	1	-13.9209
chr4	131908689	131908750	lincRNA	Gm17300	intron	ENSMUSG00000091021	ProperStrand	109	chr5	115595744	115595821	protein_coding	Mlec	utr3	ENSMUSG00000048578	NonProperStrand	25	1	-13.8841
chr5	144480608	144480670	protein_coding	Usp42	exon	ENSMUSG00000051306	ProperStrand	17	chr4	131866191	131866281	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-6.1146
chr11	48615782	48615882	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	chr19	8799831	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-1.8078
chr14	31985117	31990426	protein_coding	Nisch	exon	ENSMUSG00000021910	ProperStrand	125	chr16	23110892	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-1.3675
chr1	4883556	4885026	protein_coding	Tcea1	exon	ENSMUSG00000033813	ProperStrand	24	chr16	23110901	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.3518
chr12	77210842	77210923	protein_coding	Syne2	exon	ENSMUSG00000063450	ProperStrand	63	chr12	17552972	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-4.9947
chr9	123065930	123065946	protein_coding	Clec3b	exon	ENSMUSG00000025784	ProperStrand	58	chr5	108336363	108336423	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-4.9465
chr5	23926091	23926335	protein_coding	Cdk5	exon	ENSMUSG00000028969	ProperStrand	2	chr7	150700229	150700319	protein_coding	Nap1l4	utr3	ENSMUSG00000059119	ProperStrand	31	1	-inf
chr19	10680123	10680151	protein_coding	Ddb1	utr5	ENSMUSG00000024740	ProperStrand	304	chr10	127496336	127505785	protein_coding	Ptges3	exon	ENSMUSG00000071072	ProperStrand	89	1	-9.2703
chr16	37384897	37384913	protein_coding	Stxbp5l	utr5	ENSMUSG00000022829	ProperStrand	332	chr1	162968441	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	2	-4.9395
chr10	90584786	90586403	protein_coding	Slc25a3	exon	ENSMUSG00000061904	ProperStrand	74	chr14	76247723	76247840	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	4	-12.4119
chr1	165243148	165243164	protein_coding	Prrx1	utr5	ENSMUSG00000026586	NonProperStrand	28	chr4	131908243	131908297	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.6458
chr3	65191743	65195263	protein_coding	Ssr3	exon	ENSMUSG00000027828	ProperStrand	24	chr9	120039623	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-8.3762
chr1	29666277	29666294	LTR	MMERVK10C-int	ERVK	chr1MMERVK10C-int29665214	ProperStrand	10	chr7	116663711	116663764	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-5.9268
chr3	142431993	142432009	protein_coding	Gtf2b	intron	ENSMUSG00000028271	NonProperStrand	3	chr1	162965531	162965588	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-inf
chr15	38978236	38978287	protein_coding	Dcaf13	exon	ENSMUSG00000022300	ProperStrand	8	chr11	6428076	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-7.1562
chr10	127875499	127875551	protein_coding	Rnf41	utr3	ENSMUSG00000025373	ProperStrand	20	chrX	34622945	34623035	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-5.2611
chr10	42543695	42543730	protein_coding	Sec63	exon	ENSMUSG00000019802	ProperStrand	10	chr7	109049209	109049297	protein_coding	3200002M19Rik	utr3	ENSMUSG00000030649	ProperStrand	22	1	-19.2301
chr7	130363535	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	chr19	8799607	8799645	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-6.0329
chr19	3904233	3904249	protein_coding	Tcirg1	exon	ENSMUSG00000001750	ProperStrand	77	chr11	55296276	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-5.6898
chr7	24779190	24779213	SINE	ID_B1	B4	chr7ID_B124779183	NonProperStrand	54	chr17	81344133	81344150	protein_coding	Tmem178	exon	ENSMUSG00000024245	ProperStrand	67	1	-13.3052
chr13	9833550	9833629	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr2	26493361	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	5	-1.2492
chr15	100447458	100448433	protein_coding	Dazap2	exon	ENSMUSG00000000346	ProperStrand	5	chr4	96412508	96412526	protein_coding	Gm12695	intron	ENSMUSG00000078639	ProperStrand	110	1	-17.3190
chr7	52084332	52084410	protein_coding	Nup62	exon	ENSMUSG00000043858	ProperStrand	47	chr18	35102319	35102349	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-7.0754
chr7	13516173	13516197	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr17	23957023	23957085	protein_coding	Srrm2	utr3	ENSMUSG00000039218	ProperStrand	521	1	-4.4243
chr11	83254019	83254035	protein_coding	1700020L24Rik	exon	ENSMUSG00000035085	NonProperStrand	88	chr8	73419703	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.4587
chr11	69730661	69730730	protein_coding	Eif5a	utr3	ENSMUSG00000078812	ProperStrand	164	chrX	34622905	34623036	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	12	-20.3264
chr11	51551278	51551296	protein_coding	Sec24a	intron	ENSMUSG00000036391	ProperStrand	42	chr19	8963034	8963134	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	4	-10.1517
chr18	37802425	37802525	protein_coding	Taf7	exon	ENSMUSG00000051316	ProperStrand	24	chr3	123210907	123210976	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.6860
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	152163523	152163539	protein_coding	Trib3	utr3	ENSMUSG00000032715	NonProperStrand	46	1	-4.9744
chr14	103490451	103490487	protein_coding	Fbxl3	intron	ENSMUSG00000022124	ProperStrand	21	chr4	131866156	131866246	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-5.6911
chr5	99443584	99443601	protein_coding	Prkg2	intron	ENSMUSG00000029334	NonProperStrand	57	chr1	136257454	136257497	protein_coding	Tmem183a	exon	ENSMUSG00000042305	ProperStrand	10	1	-17.0534
chr13	69767940	69767982	protein_coding	Nsun2	intron	ENSMUSG00000021595	ProperStrand	110	chr19	5118293	5118310	protein_coding	Klc2	utr5	ENSMUSG00000024862	ProperStrand	25	1	-13.8688
chr2	30184882	30186115	protein_coding	Nup188	exon	ENSMUSG00000052533	ProperStrand	96	chr18	35716703	35716783	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-4.2516
chr5	114195647	114195709	protein_coding	Sart3	exon	ENSMUSG00000018974	ProperStrand	50	chr11	106362304	106362335	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	5	-inf
chr1	45280385	45280475	LINE	Lx2B	L1	chr1Lx2B45279808	ProperStrand	1	chr1	45280639	45280719	LTR	ORR1D1-int	MaLR	chr1ORR1D1-int45280643	NonProperStrand	1	1	-inf
chr15	55085246	55085263	protein_coding	Deptor	utr3	ENSMUSG00000022419	NonProperStrand	4	chr5	145548535	145548583	protein_coding	Trrap	exon	ENSMUSG00000045482	ProperStrand	399	1	-15.1844
chr19	46138809	46138857	protein_coding	Pprc1	exon	ENSMUSG00000055491	ProperStrand	143	chr19	8799855	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-3.3135
chr14	31984166	31986923	protein_coding	Nisch	exon	ENSMUSG00000021910	ProperStrand	125	chr9	120039551	120039641	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-3.6905
chr2	90235303	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr12	66648679	66648698	SINE	MIR	MIR	chr12MIR66648680	ProperStrand	1	1	-inf
chr14	70977908	70978734	protein_coding	Nudt18	exon	ENSMUSG00000045211	ProperStrand	5	chr10	127521200	127521272	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	1	-13.9625
chr19	5798104	5798157	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr11	95820549	95820649	protein_coding	Igf2bp1	utr3	ENSMUSG00000013415	ProperStrand	140	1	-5.8696
chr15	10504979	10504995	protein_coding	Rai14	exon	ENSMUSG00000022246	ProperStrand	180	chr7	135115653	135115682	protein_coding	Fus	exon	ENSMUSG00000030795	ProperStrand	162	1	-9.1184
chr5	130924898	130924915	protein_coding	Caln1	utr5	ENSMUSG00000060371	ProperStrand	32	chr2	145076803	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-8.9862
chr9	120038467	120038673	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	chr9	120037898	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	29	-1.2331
chr8	113355440	113357698	protein_coding	Sf3b3	exon	ENSMUSG00000033732	ProperStrand	181	chr7	148634709	148634799	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	3	-5.5673
chr10	80795448	80795464	protein_coding	Tbxa2r	exon	ENSMUSG00000034881	NonProperStrand	40	chr11	101466285	101466351	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	1	-9.6875
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr19	16294113	16294240	protein_coding	Gnaq	exon	ENSMUSG00000024639	ProperStrand	38	5	-19.6648
chr3	38763575	38763665	LINE	Lx	L1	chr3Lx38763203	NonProperStrand	1	chr17	26153598	26153678	protein_coding	Rab11fip3	intron	ENSMUSG00000037098	ProperStrand	32	1	-inf
chr3	23326181	23326197	LTR	RLTR9D	ERVK	chr3RLTR9D23325954	ProperStrand	21	chr7	25076825	25076848	protein_coding	Zfp61	exon	ENSMUSG00000050605	ProperStrand	6	1	-18.9453
chr3	33960926	33963075	protein_coding	Fxr1	exon	ENSMUSG00000027680	ProperStrand	58	chr8	95569475	95569492	protein_coding	Ces1a	intron	ENSMUSG00000071047	ProperStrand	5	1	-18.3398
chr16	17654070	17655146	protein_coding	Med15	exon	ENSMUSG00000012114	ProperStrand	24	chr11	7067186	7069426	protein_coding	Adcy1	exon	ENSMUSG00000020431	ProperStrand	183	1	-12.9338
chr2	90235297	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	87172190	87172206	protein_coding	Ppm1e	exon	ENSMUSG00000046442	ProperStrand	112	1	-3.2980
chr14	56994367	56994387	protein_coding	Atp12a	intron	ENSMUSG00000022229	ProperStrand	7	chr16	57391643	57391743	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	1	-14.7281
chr2	90235292	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	118611946	118611962	protein_coding	Disp2	exon	ENSMUSG00000040035	NonProperStrand	204	2	-4.0094
chr17	34088999	34089032	protein_coding	Rps18	exon	ENSMUSG00000008668	ProperStrand	111	chr3	123210854	123210939	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	5	-6.8487
chr2	119689766	119689848	LTR	MYSERV-int	ERVK	chr2MYSERV-int119689669	ProperStrand	4	chr2	119689916	119690006	LTR	RMER4B	ERVK	chr2RMER4B119689841	ProperStrand	4	4	-inf
chr3	135268102	135268121	protein_coding	Nfkb1	exon	ENSMUSG00000028163	ProperStrand	55	chr12	112779193	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	4	-15.4288
chr4	115761760	115761848	protein_coding	Lrrc41	exon	ENSMUSG00000028703	ProperStrand	16	chr18	33954922	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-6.0667
chr10	33342450	33342467	protein_coding	Clvs2	exon	ENSMUSG00000019785	NonProperStrand	2	chr6	125136470	125136569	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	1	-13.8789
chr17	7504708	7504724	protein_coding	Rps6ka2	utr3	ENSMUSG00000023809	NonProperStrand	18	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-11.0322
chr13	10453248	10453265	lincRNA	Gm16950	intron	ENSMUSG00000086178	ProperStrand	8	chr2	158457348	158457365	protein_coding	Actr5	exon	ENSMUSG00000037761	NonProperStrand	94	1	-16.4624
chr2	103616114	103616265	protein_coding	Caprin1	exon	ENSMUSG00000027184	ProperStrand	145	chr18	35716811	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-0.8959
chr8	89365444	89365515	protein_coding	N4bp1	utr3	ENSMUSG00000031652	ProperStrand	98	chr13	51742379	51742469	protein_coding	Cks2	intron	ENSMUSG00000062248	ProperStrand	26	1	-14.0160
chr12	73670792	73674550	protein_coding	1810048J11Rik	exon	ENSMUSG00000034501	ProperStrand	11	chr5	130300440	130300520	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-5.7288
mmu-miR-294-3p	2	22	miRNA	mmu-miR-294-3p	.	mmu-miR-294-3p	ProperStrand	35	chr9	30957870	30957936	protein_coding	Aplp2	utr3	ENSMUSG00000031996	ProperStrand	172	1	-12.2892
chr12	29316588	29318671	protein_coding	Rps7	exon	ENSMUSG00000061477	ProperStrand	129	chr8	32260354	32260434	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-3.2011
chr14	32308403	32308493	protein_coding	Eaf1	utr5	ENSMUSG00000021890	ProperStrand	10	chr11	51551300	51551380	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	1	-11.3544
chr2	154687637	154687737	protein_coding	Raly	exon	ENSMUSG00000027593	ProperStrand	116	chr4	122968677	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	11	-20.6295
chr5	145890886	145896022	protein_coding	Pdap1	utr3	ENSMUSG00000029623	ProperStrand	112	chr11	97642950	97643089	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	10	-20.2876
chr13	22127312	22127412	protein_coding	Hist1h2ah	exon	ENSMUSG00000069302	ProperStrand	12	chr8	32260335	32260359	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-7.8408
chr19	46138179	46143622	protein_coding	Pprc1	exon	ENSMUSG00000055491	ProperStrand	143	chr4	131908236	131908444	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-0.9451
chr4	132530098	132530117	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	chr15	98350146	98350283	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-1.5126
chr4	129191048	129191073	protein_coding	Marcksl1	utr5	ENSMUSG00000047945	ProperStrand	52	chr4	131866157	131866237	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-6.6267
chr14	60998023	60998039	protein_coding	Fam123a	exon	ENSMUSG00000021986	ProperStrand	13	chr1	162967506	162967553	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-6.4551
chr8	122429887	122429903	SINE	B1_Mur4	Alu	chr8B1_Mur4122429833	NonProperStrand	12	chr4	131908236	131908298	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-14.1992
chr12	105935309	105938609	protein_coding	Dicer1	exon	ENSMUSG00000041415	ProperStrand	61	chr17	24665420	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-4.9087
chr2	179992544	179992696	protein_coding	Rps21	exon	ENSMUSG00000039001	ProperStrand	46	chr14	119693352	119693368	protein_coding	Hs6st3	intron	ENSMUSG00000053465	NonProperStrand	134	1	-12.2364
chr16	17859608	17872731	protein_coding	Dgcr2	exon	ENSMUSG00000003166	ProperStrand	45	chr16	23110914	23110957	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-4.6179
chr18	73693110	73693188	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr9	120037948	120038056	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	15	-5.8737
chr10	80833847	80833947	protein_coding	Fzr1	exon	ENSMUSG00000020235	ProperStrand	26	chr16	23111389	23111446	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.5788
chr17	81344133	81344150	protein_coding	Tmem178	exon	ENSMUSG00000024245	ProperStrand	67	chr9	120038608	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-4.9437
chr6	85416068	85416623	protein_coding	Cct7	exon	ENSMUSG00000030007	ProperStrand	173	chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	1	-6.0116
chr6	77195102	77195119	protein_coding	Lrrtm1	exon	ENSMUSG00000060780	ProperStrand	19	chr13	46862939	46863025	snoRNA	ENSMUSG00000064558_SNORA55	.	ENSMUSG00000064558	ProperStrand	187	1	-13.3687
chr4	133157088	133157168	protein_coding	Sfn	exon	ENSMUSG00000047281	NonProperStrand	2	chr8	74047749	74047839	pseudogene	Gm7850	.	ENSMUSG00000092037	NonProperStrand	1	1	-inf
chr9	38543180	38543199	protein_coding	Vwa5a	exon	ENSMUSG00000023186	ProperStrand	9	chr16	23110455	23110527	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-10.0548
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr1	162966812	162966847	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-1.9290
chr8	90304979	90304995	protein_coding	Zfp423	exon	ENSMUSG00000045333	NonProperStrand	44	chrX	84483706	84483730	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-8.8714
chr9	120037898	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	chr9	15118516	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	6	-9.2425
chr9	15514257	15514276	protein_coding	Slc36a4	exon	ENSMUSG00000043885	ProperStrand	94	chr11	69483136	69483194	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.7212
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr1	42755254	42755270	protein_coding	Pou3f3	exon	ENSMUSG00000045515	NonProperStrand	117	1	-7.3835
chr3	152450610	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	chr8	129468746	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	6	-6.7315
chr7	19735223	19735240	protein_coding	Snrpd2	utr5	ENSMUSG00000040824	ProperStrand	23	chr11	6428087	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.0081
chr6	57638553	57638569	protein_coding	Pigy	utr3	ENSMUSG00000043162	NonProperStrand	18	chr19	8800396	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-5.8558
chr10	122002779	122002869	LINE	L1Md_F2	L1	chr10L1Md_F2122002095	NonProperStrand	23	chr7	5361036	5361115	protein_coding	Vmn1r58	utr3	ENSMUSG00000078808	NonProperStrand	4	1	-19.3474
chr10	59757369	59757738	protein_coding	Psap	exon	ENSMUSG00000004207	ProperStrand	124	chr4	46508137	46508157	snoRNA	ENSMUSG00000064410_SNORA36	.	ENSMUSG00000064410	ProperStrand	133	1	-10.2578
chr1	187066817	187066917	snoRNA	ENSMUSG00000077571_Snora36b	.	ENSMUSG00000077571	ProperStrand	244	chr7	116664872	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	5	-4.4093
chr12	111853273	111891631	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr16	23111373	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	11	-0.7641
chr11	75300630	75301132	protein_coding	Prpf8	exon	ENSMUSG00000020850	ProperStrand	255	chr4	131866163	131866253	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	3	-3.8217
chr10	89235396	89235446	protein_coding	Uhrf1bp1l	exon	ENSMUSG00000019951	ProperStrand	28	chr11	69483136	69483212	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.8243
chr11	79860949	79861049	protein_coding	Crlf3	utr3	ENSMUSG00000017561	ProperStrand	47	chr18	75161537	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-7.6905
chr11	88158042	88158142	protein_coding	Msi2	utr3	ENSMUSG00000069769	ProperStrand	159	chr5	130300477	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-2.0308
chr8	125766613	125766713	protein_coding	1300018I17Rik	utr3	ENSMUSG00000001062	ProperStrand	2	chr17	35297746	35298006	protein_coding	Prrc2a	exon	ENSMUSG00000024393	ProperStrand	315	1	-17.4896
chr10	90611673	90611695	protein_coding	Tmpo	utr3	ENSMUSG00000019961	ProperStrand	57	chr19	8798752	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-4.9001
chr14	71003703	71003793	protein_coding	Epb4.9	utr3	ENSMUSG00000022099	ProperStrand	48	chr15	34370543	34370623	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-3.9653
chr11	76238490	76238773	protein_coding	Abr	exon	ENSMUSG00000017631	ProperStrand	33	chr15	34370590	34370680	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-4.6811
chr17	31610169	31610213	protein_coding	Pde9a	utr3	ENSMUSG00000041119	ProperStrand	16	chr4	131866235	131866281	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-10.1915
chr19	44110740	44111314	protein_coding	Erlin1	utr3	ENSMUSG00000025198	ProperStrand	9	chr4	131865882	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-8.7951
chr1	193362186	193362277	protein_coding	Dtl	utr3	ENSMUSG00000037474	ProperStrand	27	chr2	179910830	179910846	protein_coding	Adrm1	exon	ENSMUSG00000039041	ProperStrand	27	1	-16.5433
chr14	103488529	103488564	protein_coding	Fbxl3	exon	ENSMUSG00000022124	ProperStrand	21	chr17	13112473	13112500	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-6.6462
chr1	174208448	174208693	protein_coding	Atp1a2	exon	ENSMUSG00000007097	ProperStrand	12	chr17	66468411	66468427	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	3	-inf
chr9	40609376	40609428	protein_coding	Hspa8	utr5	ENSMUSG00000015656	ProperStrand	798	chr14	75149575	75149618	protein_coding	Esd	utr3	ENSMUSG00000021996	ProperStrand	5	1	-13.3016
chr13	57842058	57842075	protein_coding	Spock1	intron	ENSMUSG00000056222	NonProperStrand	20	chr7	150717368	150717423	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-7.6970
chr8	87525135	87525238	protein_coding	Hook2	exon	ENSMUSG00000052566	ProperStrand	204	chr5	130295414	130295456	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-2.9569
chr16	90769646	90773655	protein_coding	Urb1	exon	ENSMUSG00000039929	ProperStrand	71	chr16	23111413	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-3.3110
chr9	26902773	26902789	protein_coding	Ncapd3	utr3	ENSMUSG00000035024	NonProperStrand	2	chr17	33961260	33961382	protein_coding	Rps28	exon	ENSMUSG00000067288	ProperStrand	52	1	-21.4697
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr7	51505506	51505592	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	4	-18.0438
chr10	75502137	75502172	protein_coding	Zfp280b	exon	ENSMUSG00000049764	ProperStrand	25	chr9	120039624	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-4.9793
chr2	127065866	127065902	protein_coding	Snrnp200	exon	ENSMUSG00000003660	ProperStrand	203	chr7	117166820	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-2.5741
chr11	63885336	63887052	protein_coding	Cox10	exon	ENSMUSG00000042148	NonProperStrand	187	chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-5.4967
chr1	173864269	173864285	protein_coding	Slamf6	exon	ENSMUSG00000015314	ProperStrand	17	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-12.9912
chr10	121242090	121244926	protein_coding	Srgap1	exon	ENSMUSG00000020121	NonProperStrand	80	chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	1	-10.0407
chr10	80641606	80645146	protein_coding	Eef2	utr3	ENSMUSG00000034994	ProperStrand	2244	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	17	-3.1457
chr2	130103454	130103503	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	chr19	8799581	8799644	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-1.9061
chr9	30876441	30876553	protein_coding	Zbtb44	utr3	ENSMUSG00000047412	ProperStrand	68	chr16	23111458	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.0916
chr9	78023109	78023157	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr7	28457644	28457709	protein_coding	Map3k10	intron	ENSMUSG00000040390	ProperStrand	14	2	-14.0780
chr5	136707644	136707661	protein_coding	Sh2b2	exon	ENSMUSG00000005057	NonProperStrand	101	chr12	88778630	88778723	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-5.4748
chr14	51545227	51545267	protein_coding	Apex1	exon	ENSMUSG00000035960	ProperStrand	6	chr8	32260335	32260433	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-9.3125
chr12	58691976	58691992	antisense	4921518K17Rik	.	ENSMUSG00000085851	ProperStrand	75	chr5	121655016	121655126	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.3364
chr1	4161651	4161731	LINE	L1_Mus3	L1	chr1L1_Mus34161489	NonProperStrand	1	chr6	133452305	133452395	LINE	L1_Mus2	L1	chr6L1_Mus2133452042	NonProperStrand	1	1	-inf
chr4	136259151	136259169	protein_coding	Ephb2	intron	ENSMUSG00000028664	NonProperStrand	9	chr17	39985191	39985251	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-9.7848
chr14	24976986	24977002	protein_coding	Dlg5	exon	ENSMUSG00000021782	NonProperStrand	4	chr17	33273890	33273906	protein_coding	Morc2b	exon	ENSMUSG00000048602	NonProperStrand	14	1	-inf
chr9	61761212	61761302	protein_coding	Rplp1	exon	ENSMUSG00000007892	ProperStrand	116	chr12	55797768	55797848	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	1	-6.3898
chr11	79828655	79846815	protein_coding	Suz12	utr3	ENSMUSG00000017548	ProperStrand	53	chr7	117189909	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-6.0562
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr9	39358287	39358304	protein_coding	Olfr958	exon	ENSMUSG00000050853	NonProperStrand	266	1	-5.7662
chr6	122275570	122275622	protein_coding	Phc1	exon	ENSMUSG00000040669	ProperStrand	158	chr1	162965569	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.6468
chr9	63511486	63513992	protein_coding	Smad3	utr5	ENSMUSG00000032402	ProperStrand	12	chr19	8963090	8963180	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.2811
chr18	64551048	64551065	protein_coding	Onecut2	utr3	ENSMUSG00000045991	ProperStrand	8	chr4	122968633	122968723	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	2	-16.5070
chr10	93781596	93781677	protein_coding	Tmcc3	intron	ENSMUSG00000020023	NonProperStrand	7	chr10	93992780	93992870	protein_coding	Tmcc3	intron	ENSMUSG00000020023	ProperStrand	23	1	-18.6952
chr2	121949510	121949527	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	chrX	34622906	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	5	-5.5832
chr10	83990170	83990293	protein_coding	Ckap4	utr3	ENSMUSG00000046841	ProperStrand	60	chr2	26768277	26768308	protein_coding	Rpl7a	exon	ENSMUSG00000062647	ProperStrand	234	1	-10.5843
chr12	90193297	90193314	protein_coding	Nrxn3	utr5	ENSMUSG00000066392	ProperStrand	17	chr15	5068453	5068479	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-8.5996
chr2	112086871	112086961	protein_coding	Lpcat4	exon	ENSMUSG00000027134	ProperStrand	14	chr7	29136543	29136623	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.0758
chr2	157119950	157120991	protein_coding	Rpn2	exon	ENSMUSG00000027642	ProperStrand	363	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-6.8401
chr5	108271147	108271163	protein_coding	Evi5	exon	ENSMUSG00000011831	ProperStrand	18	chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	1	-11.9302
chr14	76364345	76364362	protein_coding	Gtf2f2	intron	ENSMUSG00000067995	ProperStrand	12	chr17	39985356	39985409	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-9.1812
chr2	26337119	26337163	protein_coding	Notch1	exon	ENSMUSG00000026923	ProperStrand	145	chr1	88247745	88247773	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-3.4298
chr13	36209855	36209871	protein_coding	Fars2	utr5	ENSMUSG00000021420	ProperStrand	19	chr16	23111448	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.1411
chr9	78023109	78023181	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr15	5068407	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	6	-3.4901
chr18	53151958	53152038	LINE	L1Md_F2	L1	chr18L1Md_F253151360	ProperStrand	1	chrY	2785471	2785561	LINE	L1Md_F2	L1	chrYL1Md_F22785022	ProperStrand	1	1	-inf
chr16	91818789	91818806	protein_coding	Atp5o	intron	ENSMUSG00000022956	ProperStrand	37	chr19	3455237	3455355	protein_coding	Ppp6r3	utr3	ENSMUSG00000024908	ProperStrand	63	2	-19.8468
chr9	58833675	58838079	protein_coding	Neo1	exon	ENSMUSG00000032340	ProperStrand	35	chr16	23110852	23110932	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.8578
chr3	95039901	95039927	protein_coding	Cdc42se1	utr3	ENSMUSG00000046722	ProperStrand	12	chr10	23505152	23505242	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.9771
chr12	17554762	17554836	protein_coding	Odc1	exon	ENSMUSG00000011179	ProperStrand	173	chr7	29136566	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-1.6799
chr19	8989057	8989240	protein_coding	Ganab	exon	ENSMUSG00000071650	ProperStrand	145	chr11	77996559	77996607	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-4.3822
chr6	122678018	122678190	protein_coding	Slc2a3	utr3	ENSMUSG00000003153	ProperStrand	682	chr1	89681232	89681351	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	3	-3.6613
chrX	98636940	98637019	protein_coding	Nono	exon	ENSMUSG00000031311	ProperStrand	102	chr3	79340141	79340196	protein_coding	Fnip2	intron	ENSMUSG00000061175	ProperStrand	45	1	-12.8273
chr11	97553372	97553695	protein_coding	Pcgf2	exon	ENSMUSG00000018537	ProperStrand	31	chr12	17552950	17553030	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-6.3887
chr7	149064269	149064323	protein_coding	Tollip	intron	ENSMUSG00000025139	ProperStrand	19	chr12	112779238	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-7.0511
chr1	133252414	133252452	protein_coding	Srgap2	intron	ENSMUSG00000026425	NonProperStrand	17	chr7	116663633	116663733	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	NonProperStrand	51	1	-16.2531
chr11	60231065	60231087	protein_coding	4933439F18Rik	utr5	ENSMUSG00000018415	ProperStrand	26	chr7	87370457	87370554	protein_coding	Sema4b	utr3	ENSMUSG00000030539	ProperStrand	54	1	-15.2208
chr14	87659491	87659512	LTR	MTEa	MaLR	chr14MTEa87659331	NonProperStrand	83	chr1	173171250	173171267	protein_coding	Ndufs2	exon	ENSMUSG00000013593	ProperStrand	32	1	-13.9302
chr19	4726616	4729070	protein_coding	Spnb3	exon	ENSMUSG00000067889	ProperStrand	19	chr9	120037971	120038051	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-6.9787
chr10	61732763	61773848	protein_coding	Hk1	exon	ENSMUSG00000037012	ProperStrand	84	chr16	23111374	23111496	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	5	-5.5991
chr8	5639836	5639877	protein_coding	Gm1840	exon	ENSMUSG00000043192	ProperStrand	2	chr4	131908236	131908291	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-8.3123
chr10	59762541	59762637	protein_coding	Psap	exon	ENSMUSG00000004207	ProperStrand	124	chr11	62418044	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-4.1607
chr7	52382010	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	chr15	5068413	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	3	-2.0482
chr13	9833563	9833710	LINE	L1Md_T	L1	chr13L1Md_T9831266	NonProperStrand	15	chr2	90284682	90286314	protein_coding	Ptprj	exon	ENSMUSG00000025314	NonProperStrand	4	1	-26.3461
chr1	162286088	162286104	protein_coding	Rabgap1l	intron	ENSMUSG00000026721	ProperStrand	44	chr19	8798484	8798513	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-5.8188
chr8	77644697	77644732	protein_coding	Mcm5	exon	ENSMUSG00000005410	ProperStrand	199	chr8	4210840	4210857	protein_coding	BC068157	exon	ENSMUSG00000064125	NonProperStrand	7	1	-15.3319
chr6	71554044	71554125	protein_coding	Kdm3a	exon	ENSMUSG00000053470	ProperStrand	41	chr6	71832550	71832577	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-6.3618
chr2	90235298	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr3	32820061	32820078	protein_coding	Usp13	intron	ENSMUSG00000056900	ProperStrand	15	1	-7.2074
chr11	102856189	102856231	protein_coding	Dcakd	utr3	ENSMUSG00000020935	ProperStrand	61	chr19	44471067	44471096	protein_coding	Scd1	utr3	ENSMUSG00000037071	ProperStrand	32	1	-14.5494
chr1	34247130	34247188	protein_coding	Dst	utr5	ENSMUSG00000026131	ProperStrand	461	chr10	79598328	79598346	protein_coding	Dos	intron	ENSMUSG00000035640	ProperStrand	45	1	-9.8093
chr7	117190015	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	chr12	60774075	60774112	snoRNA	ENSMUSG00000077603_SNORA3	.	ENSMUSG00000077603	ProperStrand	185	1	-1.4597
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr19	8963032	8963048	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-5.4782
chrX	34667269	34667285	protein_coding	Nkap	exon	ENSMUSG00000016409	NonProperStrand	133	chr4	131865868	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.7090
chr6	140599982	140600021	protein_coding	Aebp2	utr3	ENSMUSG00000030232	ProperStrand	34	chr10	110918549	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	3	-10.8670
chr6	124767741	124767781	protein_coding	Usp5	exon	ENSMUSG00000038429	ProperStrand	35	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	3	-11.0779
chr8	72287171	72287189	protein_coding	Zfp866	utr3	ENSMUSG00000043090	NonProperStrand	134	chr16	23111373	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-2.4284
chr16	21221528	21221754	protein_coding	Ephb3	exon	ENSMUSG00000005958	ProperStrand	23	chr4	131908689	131908722	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.7500
chr11	64842085	64842185	protein_coding	Arhgap44	intron	ENSMUSG00000033389	ProperStrand	28	chr7	116663696	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.8921
chr15	96839319	96839361	protein_coding	Slc38a4	exon	ENSMUSG00000022464	ProperStrand	139	chr18	35714231	35714291	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-3.5926
chr4	138867205	138867223	protein_coding	Akr7a5	intron	ENSMUSG00000028743	ProperStrand	22	chr2	158185620	158185666	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-8.4984
chr7	148634766	148634837	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	chr4	116827858	116827892	snoRNA	ENSMUSG00000064751_SNORD46	.	ENSMUSG00000064751	ProperStrand	132	1	-2.5617
chr2	151972741	151972788	protein_coding	Tcf15	intron	ENSMUSG00000068079	ProperStrand	4	chr15	34370545	34370614	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-9.0741
chr9	64023909	64023929	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	chr4	98428284	98432161	protein_coding	Kank4	exon	ENSMUSG00000035407	ProperStrand	35	1	-9.7644
chr4	150538028	150538044	protein_coding	Camta1	exon	ENSMUSG00000014592	ProperStrand	170	chr11	113523870	113523887	protein_coding	Cog1	utr3	ENSMUSG00000018661	ProperStrand	51	1	-11.5513
chr1	72290954	72290973	snRNA	ENSMUSG00000093111_AC120136.1	.	ENSMUSG00000093111	ProperStrand	137	chr17	24857716	24857775	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-2.0808
chr8	119446331	119450007	protein_coding	Cenpn	utr5	ENSMUSG00000031756	ProperStrand	15	chr15	85974967	85974983	protein_coding	Cerk	exon	ENSMUSG00000035891	NonProperStrand	9	1	-19.8655
chr11	96650633	96662093	protein_coding	Cbx1	utr5	ENSMUSG00000018666	ProperStrand	14	chr11	116535951	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	1	-8.8398
chr4	7717359	7717439	LINE	Lx3_Mus	L1	chr4Lx3_Mus7716647	NonProperStrand	1	chr11	47518013	47518103	protein_coding	Sgcd	intron	ENSMUSG00000020354	NonProperStrand	8	1	-inf
chr1	29394850	29394940	LINE	L1Md_T	L1	chr1L1Md_T29394846	ProperStrand	1	chr7	54442388	54442468	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-inf
chr5	3816246	3816309	protein_coding	Krit1	intron	ENSMUSG00000000600	ProperStrand	27	chrX	71517851	71517951	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-8.1433
chr16	50274896	50280534	protein_coding	Bbx	exon	ENSMUSG00000022641	ProperStrand	18	chr18	73693169	73693187	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-7.9292
chr11	69483217	69483307	protein_coding-noncoding	Eif4a1	utr3	ENSMUSG00000059796	ProperStrand	68	chr16	23110454	23110526	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.2508
chr15	82725599	82725635	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	chr11	6520324	6520442	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	1	-3.1109
chr19	47970971	47970987	protein_coding	Itprip	utr3	ENSMUSG00000079254	ProperStrand	75	chr11	62416599	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-4.7351
chr16	13813339	13813429	protein_coding	Rrn3	utr3	ENSMUSG00000022682	ProperStrand	58	chr7	117189955	117190035	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.3943
chr2	90235289	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr13	105097455	105102796	protein_coding	Adamts6	exon	ENSMUSG00000046169	ProperStrand	3	1	-10.7414
chr10	114598272	114598288	protein_coding	Tph2	intron	ENSMUSG00000006764	NonProperStrand	19	chr15	34370626	34370676	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-5.7679
chr5	122019031	122020648	protein_coding	Aldh2	exon	ENSMUSG00000029455	ProperStrand	108	chr1	162967529	162967566	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-2.4330
chr12	17552950	17553008	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr1	162967735	162967805	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	1	-2.2893
chr9	103222503	103222585	protein_coding	Topbp1	exon	ENSMUSG00000032555	ProperStrand	81	chrX	34622918	34623008	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-2.6398
chr11	106649708	106649786	protein_coding	Ddx5	utr5	ENSMUSG00000020719	ProperStrand	181	chr7	117166781	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-2.7726
chr2	24773635	24773680	protein_coding	Ehmt1	intron	ENSMUSG00000036893	ProperStrand	45	chr12	30262716	30262733	protein_coding	Myt1l	intron	ENSMUSG00000061911	ProperStrand	38	1	-14.8235
chr13	118056280	118056380	protein_coding	Emb	exon	ENSMUSG00000021728	ProperStrand	13	chr4	134086358	134086608	protein_coding	Fam54b	exon	ENSMUSG00000046671	ProperStrand	10	1	-21.7531
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr7	139767843	139767861	protein_coding	Oat	intron	ENSMUSG00000030934	NonProperStrand	7	1	-12.2125
chr5	42136455	42136473	Low_complexity	GA-rich	Low_complexity	chr5GA-rich42136449	NonProperStrand	106	chr5	130295414	130295490	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	3	-10.0446
chr19	41940031	41941238	protein_coding	Rrp12	exon	ENSMUSG00000035049	ProperStrand	106	chr16	23110469	23110549	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.5509
mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr7	16899591	16899609	protein_coding	Bbc3	intron	ENSMUSG00000002083	NonProperStrand	3	1	-12.2357
chr4	116826698	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	chr7	116664795	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	17	-2.6617
chr1	158555712	158560084	protein_coding	Abl2	exon	ENSMUSG00000026596	ProperStrand	37	chr1	162966813	162966843	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	2	-11.6147
chr16	33865607	33865695	protein_coding	Itgb5	exon	ENSMUSG00000022817	ProperStrand	49	chr8	109583594	109583646	protein_coding	Nip7	utr3	ENSMUSG00000031917	ProperStrand	18	2	-inf
chr4	58104588	58104604	protein_coding	Svep1	intron	ENSMUSG00000028369	ProperStrand	54	chr10	126532147	126532163	protein_coding	Os9	utr3	ENSMUSG00000040462	NonProperStrand	28	1	-15.0603
chr6	51414098	51414150	protein_coding	Hnrnpa2b1	exon	ENSMUSG00000004980	ProperStrand	166	chr7	74189892	74189909	protein_coding	Adamts17	intron	ENSMUSG00000058145	NonProperStrand	73	1	-10.8769
chr2	101534024	101534114	protein_coding	Traf6	intron	ENSMUSG00000027164	ProperStrand	24	chr6	89440602	89440692	protein_coding	Chchd6	intron	ENSMUSG00000030086	NonProperStrand	6	1	-18.9230
chr1	155068506	155068619	protein_coding	Lamc1	utr3	ENSMUSG00000026478	ProperStrand	239	chr2	32453170	32453186	protein_coding	St6galnac4	utr3	ENSMUSG00000079442	NonProperStrand	5	1	-15.7036
chr8	97624079	97624179	protein_coding	Kifc3	utr3	ENSMUSG00000031788	ProperStrand	13	chr9	120038613	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.9817
chr11	62416574	62416604	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr7	117189908	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	13	-14.3899
chr8	113558058	113558148	protein_coding	Aars	utr5	ENSMUSG00000031960	ProperStrand	355	chr4	131865411	131865491	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-1.0666
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr8	28284812	28284842	protein_coding	Rab11fip1	exon	ENSMUSG00000031488	ProperStrand	8	2	-14.5016
chr12	29316503	29316593	protein_coding	Rps7	exon	ENSMUSG00000061477	ProperStrand	129	chr7	148634702	148634782	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-2.6012
chr8	119467336	119467356	protein_coding	Atmin	utr5	ENSMUSG00000047388	ProperStrand	26	chr19	8963053	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.7706
chrX	71589885	71589904	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr2	32818850	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-2.5385
chr7	34994248	34994338	protein_coding-noncoding	Gpi1	utr3	ENSMUSG00000036427	ProperStrand	19	chr16	23110472	23110552	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.5826
chr17	46861595	46861611	protein_coding	Pex6	exon	ENSMUSG00000002763	ProperStrand	292	chr6	71832620	71832685	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-2.6566
chr9	4467596	4467676	protein_coding	Gria4	intron	ENSMUSG00000025892	ProperStrand	20	chr9	3369848	3369938	protein_coding	Alkbh8	intron	ENSMUSG00000025899	ProperStrand	7	1	-20.0012
chr10	51865578	51865594	protein_coding	Ros1	exon	ENSMUSG00000019893	NonProperStrand	15	chr14	24368776	24368793	protein_coding	Kcnma1	intron	ENSMUSG00000063142	NonProperStrand	104	1	-15.0491
chr2	32142167	32142247	protein_coding-noncoding	Swi5	utr3	ENSMUSG00000044627	ProperStrand	1	chr2	32142000	32142023	protein_coding	Swi5	intron	ENSMUSG00000044627	ProperStrand	16	1	-inf
chr9	114656946	114656970	protein_coding	Cmtm6	utr3	ENSMUSG00000032434	ProperStrand	24	chr4	57268565	57268583	protein_coding	Ptpn3	intron	ENSMUSG00000038764	ProperStrand	48	1	-15.6088
chr10	79202220	79202320	protein_coding	Polrmt	exon	ENSMUSG00000020329	ProperStrand	11	chr4	131865908	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.8470
chr7	86609696	86609796	protein_coding	Polg	exon	ENSMUSG00000039176	ProperStrand	93	chr14	76247793	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-3.3572
chr3	107272845	107272861	protein_coding	Slc6a17	utr3	ENSMUSG00000027894	ProperStrand	16	chr18	35714262	35714280	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-5.9996
chr7	52378400	52378450	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	chr19	8799581	8799622	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	4	-8.2963
chr11	55296208	55296335	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	chr8	98269958	98270086	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	22	-19.1308
chr13	51743580	51743626	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	NonProperStrand	5	chr8	73419657	73419732	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	NonProperStrand	53	1	-18.1807
chr15	103334476	103334492	protein_coding	Pde1b	intron	ENSMUSG00000022489	ProperStrand	19	chr8	32260355	32260426	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-6.9002
chr2	127416746	127416830	protein_coding	Mrps5	intron	ENSMUSG00000027374	ProperStrand	84	chr11	97643001	97643091	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.9168
chr11	100414998	100415014	protein_coding	Ttc25	exon	ENSMUSG00000006784	NonProperStrand	119	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.8323
chrX	98751887	98751940	protein_coding	Taf1	exon	ENSMUSG00000031314	ProperStrand	61	chr7	52378397	52378460	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	1	-8.4711
chr7	30048620	30048669	protein_coding	Spint2	exon	ENSMUSG00000074227	ProperStrand	82	chr4	131865855	131865986	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-3.9498
chr16	5013465	5013569	protein_coding	Rogdi	exon	ENSMUSG00000022540	ProperStrand	7	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.7768
chr1	72207058	72207148	protein_coding	Mreg	utr3	ENSMUSG00000039395	ProperStrand	63	chr12	92811929	92812009	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	1	-8.4735
chr7	123270790	123270856	protein_coding	Plekha7	intron	ENSMUSG00000045659	ProperStrand	66	chr3	108228259	108228275	protein_coding	Sars	utr3	ENSMUSG00000068739	NonProperStrand	200	1	-10.7066
chr14	65685244	65685334	protein_coding	Extl3	intron	ENSMUSG00000021978	ProperStrand	36	chrX	103389830	103390019	protein_coding	Pgk1	exon	ENSMUSG00000062070	ProperStrand	484	1	-10.1626
chr13	112476527	112477681	protein_coding	Mier3	intron	ENSMUSG00000032727	NonProperStrand	14	chr19	8963027	8963166	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-8.2934
chr2	164521970	164521987	SINE	B4A	B4	chr2B4A164521909	ProperStrand	41	chr9	50816824	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	1	-12.5776
chr11	120242547	120242637	protein_coding	Nploc4	utr3	ENSMUSG00000039703	ProperStrand	44	chr4	131908361	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	9	-inf
chr13	118053224	118053291	protein_coding	Emb	exon	ENSMUSG00000021728	ProperStrand	13	chr7	116664822	116664912	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-5.4346
chr18	35102297	35102345	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	chr8	113366282	113366354	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	4	-9.4500
chr2	147009105	147009122	protein_coding	Nkx2-2	utr3	ENSMUSG00000027434	NonProperStrand	84	chr4	131908235	131908335	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.9682
chr4	43505656	43505710	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	NonProperStrand	174	chr3	30515745	30515845	protein_coding	Mynn	utr3	ENSMUSG00000037730	NonProperStrand	2	1	-19.0571
chr5	104735049	104738296	protein_coding	Ibsp	exon	ENSMUSG00000029306	ProperStrand	15	chr6	113088123	113088190	protein_coding	Setd5	exon	ENSMUSG00000034269	ProperStrand	162	2	-inf
chr12	111874734	111875332	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr11	62418050	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	2	-2.5577
chr18	38014198	38015147	protein_coding	Diap1	exon	ENSMUSG00000024456	ProperStrand	77	chr4	131865889	131865979	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.3962
chr11	116535916	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr4	149618405	149619245	protein_coding	Eno1	exon	ENSMUSG00000063524	ProperStrand	432	1	-2.2542
chr15	36538129	36538182	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr15	10965488	10965504	protein_coding	Rxfp3	utr3	ENSMUSG00000060735	ProperStrand	37	1	-8.8531
chr1	93342189	93345290	protein_coding	Per2	exon	ENSMUSG00000055866	ProperStrand	114	chr14	100345368	100345407	protein_coding	Klf12	intron	ENSMUSG00000072294	ProperStrand	14	1	-14.9946
chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr9	72816966	72816982	protein_coding	Dyx1c1	exon	ENSMUSG00000092192	ProperStrand	34	1	-7.5866
chr2	90235313	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	47962862	47962880	protein_coding	Wdr96	intron	ENSMUSG00000044948	NonProperStrand	11	1	-7.8469
chr10	58646413	58654957	protein_coding	Sept10	exon	ENSMUSG00000019917	ProperStrand	34	chr9	120039544	120039622	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-4.3830
chr16	34936936	34936956	protein_coding	Mylk	intron	ENSMUSG00000022836	NonProperStrand	56	chr4	131865856	131865988	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-5.2588
chr1	182518499	182518811	protein_coding	Parp1	exon	ENSMUSG00000026496	ProperStrand	227	chr8	13876097	13876177	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-4.5448
chr2	69856510	69856538	protein_coding	Ubr3	exon	ENSMUSG00000044308	ProperStrand	62	chr4	122968594	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-6.2161
chr7	119253775	119253792	protein_coding	Usp47	utr3	ENSMUSG00000059263	ProperStrand	40	chr11	69483194	69483268	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.1638
chr15	55194057	55194074	protein_coding	Col14a1	exon	ENSMUSG00000022371	NonProperStrand	10	chr19	8799829	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-8.5498
chr15	36538308	36538408	protein_coding	Pabpc1	utr5	ENSMUSG00000022283	ProperStrand	908	chr2	153172009	153172025	protein_coding	Asxl1	utr5	ENSMUSG00000042548	NonProperStrand	13	1	-10.9903
chr15	75832872	75832889	protein_coding	Fam83h	exon	ENSMUSG00000046761	ProperStrand	10	chr7	52381719	52381760	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-11.2281
chr9	57004887	57006081	protein_coding	Commd4	exon	ENSMUSG00000032299	ProperStrand	8	chr1	88247743	88247766	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-9.1768
chr11	6240470	6240578	protein_coding	Ogdh	exon	ENSMUSG00000020456	ProperStrand	42	chr11	51551377	51551424	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	7	-20.2478
chr17	35647383	35647473	protein_coding	Pou5f1	exon	ENSMUSG00000024406	ProperStrand	104	chr4	131866187	131866267	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-2.6754
chr17	56452587	56454617	protein_coding	Uhrf1	exon	ENSMUSG00000001228	ProperStrand	229	chr18	35716762	35716842	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	13	-16.4409
chr8	125741087	125741105	protein_coding	4732415M23Rik	intron	ENSMUSG00000048478	ProperStrand	88	chr1	102076754	102076790	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	1	-8.6680
chr6	124881831	124881847	protein_coding	Mlf2	intron	ENSMUSG00000030120	ProperStrand	80	chr8	73419748	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-4.5968
chr8	34899990	34900090	protein_coding	Rbpms	intron	ENSMUSG00000031586	ProperStrand	58	chr7	148634799	148634837	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-4.0499
chr4	131782030	131782051	protein_coding	Gmeb1	exon	ENSMUSG00000028901	ProperStrand	15	chr9	15118323	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-6.1555
chr6	120369486	120369566	protein_coding	Kdm5a	exon	ENSMUSG00000030180	ProperStrand	57	chr2	32081778	32081868	protein_coding	Prrc2b	exon	ENSMUSG00000039262	ProperStrand	344	12	-19.3429
chr19	7114428	7114454	protein_coding	Stip1	utr5	ENSMUSG00000024966	ProperStrand	100	chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	1	-8.4659
chr14	119453869	119453886	protein_coding	Uggt2	exon	ENSMUSG00000042104	NonProperStrand	2	chr19	8963097	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-9.4105
chr18	36817645	36817751	protein_coding	Ankhd1	utr3	ENSMUSG00000024483	ProperStrand	56	chr11	106362337	106362378	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-5.9781
chr11	62951997	62952014	protein_coding	Pmp22	intron	ENSMUSG00000018217	NonProperStrand	40	chr11	69481331	69481432	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.9506
chr7	19661962	19661978	protein_coding	Dmwd	exon	ENSMUSG00000030410	ProperStrand	41	chr18	35714144	35714246	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.1545
chr2	25078779	25078807	protein_coding	Tubb4b	exon	ENSMUSG00000036752	ProperStrand	58	chr8	98269959	98270059	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-5.6079
chr5	35435710	35435800	protein_coding	Lrpap1	utr3	ENSMUSG00000029103	ProperStrand	43	chr16	23110912	23110992	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.3514
chr15	98885760	98885781	protein_coding	Prph	exon	ENSMUSG00000023484	ProperStrand	8	chr7	117189932	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-11.9261
chr1	158739226	158739283	protein_coding	Ralgps2	utr3	ENSMUSG00000026594	ProperStrand	16	chr11	67167096	67167112	protein_coding	Myh13	exon	ENSMUSG00000060180	ProperStrand	145	1	-14.2303
chr2	130109497	130109513	protein_coding	Idh3b	exon	ENSMUSG00000027406	ProperStrand	146	chr7	118219704	118219740	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-2.5572
chr9	25059948	25059964	protein_coding	Sept7	intron	ENSMUSG00000001833	ProperStrand	101	chr2	145077956	145209255	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-6.6887
chr17	4082552	4082646	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr11	62418058	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-2.4580
chr7	116077971	116078042	protein_coding	Eif3f	exon	ENSMUSG00000031029	ProperStrand	69	chr17	6232006	6232022	protein_coding	Tulp4	exon	ENSMUSG00000034377	NonProperStrand	265	1	-10.0547
chr17	30772308	30772324	protein_coding	Dnahc8	utr5	ENSMUSG00000033826	ProperStrand	246	chr1	162965981	162966006	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-1.2674
chr5	130295805	130296491	protein_coding	Cct6a	exon	ENSMUSG00000029447	ProperStrand	128	chr8	113362429	113362474	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	1	-7.7517
chr3	116569119	116581155	SINE	ID_B1	B4	chr3ID_B1116569089	NonProperStrand	1	chr3	116569153	116581199	protein_coding	Frrs1	utr5	ENSMUSG00000033386	ProperStrand	27	1	-inf
chr12	82120671	82120689	Other	RMER1B	Other	chr12RMER1B82120664	ProperStrand	1	chr11	119155999	119156790	protein_coding	Eif4a3	exon	ENSMUSG00000025580	ProperStrand	14	1	-inf
chr15	36538422	36538477	protein_coding	Pabpc1	utr5	ENSMUSG00000022283	ProperStrand	908	chr10	39978344	39978434	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-0.8528
chrX	91435159	91435177	protein_coding	Eif2s3x	utr3	ENSMUSG00000035150	NonProperStrand	83	chr9	40612125	40612164	snoRNA	ENSMUSG00000075924_Snord14d	.	ENSMUSG00000075924	ProperStrand	131	1	-11.0929
chr7	52958453	52958469	protein_coding	Car11	exon	ENSMUSG00000003273	NonProperStrand	250	chr11	62416575	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-4.4406
chr18	80804524	80804540	protein_coding	Nfatc1	utr3	ENSMUSG00000033016	ProperStrand	35	chr5	92386170	92386303	pseudogene	Gm15710	.	ENSMUSG00000084111	ProperStrand	28	1	-15.9196
chrX	159306067	159306104	protein_coding	Syap1	intron	ENSMUSG00000031357	ProperStrand	11	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	5	-20.9185
chr9	121657643	121657733	protein_coding	Nktr	exon	ENSMUSG00000032525	ProperStrand	41	chr14	76247705	76247786	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-4.9022
chr2	158683670	158683709	protein_coding	Dhx35	utr3	ENSMUSG00000027655	ProperStrand	37	chr1	145626059	145626149	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-9.8020
chr4	108278918	108278934	protein_coding	Orc1	exon	ENSMUSG00000028587	ProperStrand	161	chr7	128178430	128178478	protein_coding	Mettl9	exon	ENSMUSG00000030876	ProperStrand	20	1	-13.5582
chr18	36961596	36961662	misc_RNA	Vault	.	ENSMUSG00000065145	ProperStrand	177	chr11	115711456	115711644	protein_coding	Llgl2	exon	ENSMUSG00000020782	ProperStrand	62	1	-11.0770
chr17	24217390	24225011	protein_coding	Pdpk1	exon	ENSMUSG00000024122	ProperStrand	18	chr17	34748271	34748314	protein_coding	Agpat1	exon	ENSMUSG00000034254	ProperStrand	28	2	-19.0576
chr7	52958453	52958469	protein_coding	Car11	exon	ENSMUSG00000003273	NonProperStrand	250	chr13	23673479	23673544	protein_coding	Hist1h4d	exon	ENSMUSG00000061482	ProperStrand	57	1	-10.5552
chr9	42061568	42061602	LINE	Lx8	L1	chr9Lx842061339	ProperStrand	1	chr9	120038552	120038665	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-inf
chr7	13516167	13516192	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chrX	71517821	71517911	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-2.2141
chr11	120673480	120679479	protein_coding	Fasn	exon	ENSMUSG00000025153	ProperStrand	298	chr18	35716813	35716883	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-1.1260
chr11	82692475	82692491	protein_coding	Rad51l3	exon	ENSMUSG00000018841	ProperStrand	112	chr3	68889203	68889244	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-2.1728
chr15	12279862	12279926	protein_coding	Golph3	utr3	ENSMUSG00000022200	ProperStrand	35	chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-7.5284
chr16	85120151	85120169	protein_coding	App	intron	ENSMUSG00000022892	ProperStrand	11	chr5	149863854	149863948	protein_coding	Hmgb1	utr5	ENSMUSG00000066551	NonProperStrand	16	1	-19.2002
chr9	123738285	123738385	protein_coding	Fyco1	exon	ENSMUSG00000025241	ProperStrand	31	chr7	86840870	86840890	protein_coding	5730590G19Rik	exon	ENSMUSG00000046591	NonProperStrand	14	1	-17.6812
chr11	42440243	42440259	protein_coding	Gabrb2	exon	ENSMUSG00000007653	ProperStrand	248	chr15	36525853	36526354	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	1	-5.0898
chr2	24808876	24815099	protein_coding	Zmynd19	exon	ENSMUSG00000026974	ProperStrand	18	chr16	23110902	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-3.3354
chr1	194762126	194762213	protein_coding	Syt14	intron	ENSMUSG00000016200	ProperStrand	10	chr16	23110900	23110935	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.7978
chr18	47972404	47972420	DNA	MER97c	MER1_type?	chr18MER97c47972406	NonProperStrand	2	chr16	23111384	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-8.0851
chr8	24051225	24051241	protein_coding	Myst3	utr3	ENSMUSG00000031540	NonProperStrand	5	chr9	96993496	96993517	protein_coding	Slc25a36	exon	ENSMUSG00000032449	ProperStrand	159	1	-16.4774
chr10	103635259	103635349	LINE	MusHAL1	L1	chr10MusHAL1103633655	NonProperStrand	1	chr7	150408969	150409048	protein_coding	Kcnq1	intron	ENSMUSG00000009545	ProperStrand	59	1	-inf
chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	chr1	59761694	59761716	snoRNA	ENSMUSG00000089093_Snord11	.	ENSMUSG00000089093	ProperStrand	193	2	-7.7745
chr15	98665774	98691589	protein_coding	Mll2	exon	ENSMUSG00000048154	ProperStrand	170	chr4	131865911	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.0419
chr17	39985196	39985295	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr1	194571764	194571802	snRNA	ENSMUSG00000064881_U5	.	ENSMUSG00000064881	ProperStrand	187	1	-3.7520
chr9	120866250	120866267	protein_coding	Ctnnb1	exon	ENSMUSG00000006932	ProperStrand	214	chr4	131866173	131866292	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-1.5124
chr9	15114457	15118221	protein_coding	Taf1d	exon	ENSMUSG00000031939	ProperStrand	363	chr2	158205268	158205358	snoRNA	ENSMUSG00000064585_SNORA71	.	ENSMUSG00000064585	ProperStrand	418	2	-9.5224
chr7	29171540	29171558	protein_coding	Med29	utr3	ENSMUSG00000003444	NonProperStrand	134	chr12	70882345	70882363	protein_coding	Cdkl1	intron	ENSMUSG00000020990	NonProperStrand	2	1	-inf
chr2	174253110	174253200	protein_coding	Ctsz	utr3	ENSMUSG00000016256	ProperStrand	13	chr10	39978345	39978425	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-8.5316
chr9	110763813	110763865	protein_coding	Prss50	exon	ENSMUSG00000048752	ProperStrand	2	chr2	156604371	156604387	protein_coding	Myl9	exon	ENSMUSG00000067818	ProperStrand	5	1	-21.6030
chr11	62416573	62416596	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr8	108761292	108765180	protein_coding	Prmt7	exon	ENSMUSG00000060098	ProperStrand	43	1	-9.6416
chr17	36004528	36004629	protein_coding	Ppp1r18	exon	ENSMUSG00000034595	ProperStrand	4	chr17	24857795	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-7.6570
chr13	38071544	38071609	protein_coding	Ssr1	utr3	ENSMUSG00000021427	ProperStrand	65	chr15	79913288	79913347	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	3	-8.5971
chr5	74489201	74489291	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr2	91436228	91436335	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	2	-1.5033
chr4	133628939	133628955	protein_coding	Aim1l	exon	ENSMUSG00000012123	ProperStrand	32	chr12	106883080	106883100	protein_coding	Atg2b	exon	ENSMUSG00000041341	ProperStrand	67	1	-14.3552
chr2	165668183	165668201	protein_coding	Zmynd8	intron	ENSMUSG00000039671	ProperStrand	81	chr18	35716683	35716762	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-3.1256
chr5	35440839	35440892	protein_coding	Lrpap1	exon	ENSMUSG00000029103	ProperStrand	43	chr2	26494734	26494824	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.7180
chr15	27492621	27494728	protein_coding	Ank	exon	ENSMUSG00000022265	ProperStrand	37	chrX	97594619	97594635	protein_coding	Eda	utr3	ENSMUSG00000059327	ProperStrand	8	1	-18.0556
chr5	54389949	54389966	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	chr5	15510862	15510878	protein_coding	Cacna2d1	intron	ENSMUSG00000040118	NonProperStrand	13	1	-13.8972
chr11	30854047	30854064	protein_coding	Erlec1	exon	ENSMUSG00000020311	ProperStrand	5	chr2	26493390	26493498	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-8.7753
chr5	138092450	138092511	protein_coding	Agfg2	utr3	ENSMUSG00000029722	ProperStrand	14	chr9	15119733	15119764	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-12.8081
chr17	75790277	75790293	protein_coding	Ltbp1	utr3	ENSMUSG00000001870	NonProperStrand	66	chr7	52382754	52382832	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	2	-10.6067
chr18	67449070	67449141	protein_coding	Impa2	exon	ENSMUSG00000024525	ProperStrand	31	chr4	131866251	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-8.1549
chr11	77994683	77994936	protein_coding	Rpl23a	exon	ENSMUSG00000058546	ProperStrand	121	chr14	61398407	61398423	protein_coding	C1qtnf9	exon	ENSMUSG00000071347	ProperStrand	187	1	-9.6254
chr7	36388906	36389233	protein_coding	Ankrd27	exon	ENSMUSG00000034867	ProperStrand	132	chr2	166890499	166890544	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-5.9975
chr7	28146782	28160501	protein_coding	Spnb4	exon	ENSMUSG00000011751	NonProperStrand	84	chr17	35299507	35299639	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	3	-10.0102
chrX	150715706	150715723	LTR	IAPEY3-int	ERVK	chrXIAPEY3-int150714951	NonProperStrand	5	chr18	73693110	73693145	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-10.6437
chr3	87517191	87517229	protein_coding	Arhgef11	exon	ENSMUSG00000041977	NonProperStrand	4	chr4	131866161	131866239	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	NonProperStrand	19	1	-inf
chr1	174047354	174047371	protein_coding	Copa	exon	ENSMUSG00000026553	ProperStrand	33	chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	1	-10.0334
chr17	29835590	29836180	protein_coding	Ftsjd2	exon	ENSMUSG00000024019	ProperStrand	31	chr7	116664860	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.7407
chr4	131865855	131865988	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr15	71624765	71624797	snoRNA	ENSMUSG00000088895_SNORA81	.	ENSMUSG00000088895	ProperStrand	348	7	-2.6461
chr14	73023263	73023343	protein_coding	Fndc3a	intron	ENSMUSG00000033487	ProperStrand	84	chr1	89673580	89673670	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-2.6652
chr11	106011602	106011659	protein_coding	Map3k3	utr3	ENSMUSG00000020700	ProperStrand	36	chr1	162965994	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	4	-14.5704
chr9	45198928	45199653	protein_coding	Fxyd6	exon	ENSMUSG00000066705	NonProperStrand	108	chr9	64022855	64022923	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-6.8561
chr10	80031778	80031817	protein_coding	Klf16	exon	ENSMUSG00000035397	ProperStrand	5	chr9	120038571	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-8.0049
chr5	135884630	135884646	protein_coding	Hip1	utr3	ENSMUSG00000039959	NonProperStrand	23	chr4	131865867	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.4190
chr15	76175483	76175508	protein_coding	Cyc1	exon	ENSMUSG00000022551	ProperStrand	47	chr11	51551279	51551355	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	1	-8.1881
chr3	72786831	72786911	LINE	Lx3_Mus	L1	chr3Lx3_Mus72785353	ProperStrand	1	chr10	63162507	63162597	protein_coding	Ctnna3	intron	ENSMUSG00000060843	ProperStrand	66	1	-inf
chr2	90235315	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr14	87907943	87907960	protein_coding	Tdrd3	intron	ENSMUSG00000022019	ProperStrand	19	1	-6.7268
chr16	91044767	91044783	protein_coding	Gcfc1	utr5	ENSMUSG00000022974	ProperStrand	17	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-9.7817
chr1	58072740	58072830	protein_coding	Sgol2	exon	ENSMUSG00000026039	ProperStrand	36	chr10	23505205	23505268	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.9992
chr9	30987416	30987433	protein_coding	Aplp2	intron	ENSMUSG00000031996	ProperStrand	172	chr5	54389949	54389965	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	1	-8.6726
chr5	100855902	100855943	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr7	52382872	52384084	protein_coding	Rpl13a	exon	ENSMUSG00000074129	ProperStrand	269	1	-3.7444
chr18	65790952	65791032	protein_coding	Zfp532	intron	ENSMUSG00000042439	ProperStrand	24	chrX	34622921	34623011	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-4.9020
chr1	72206958	72207024	protein_coding	Mreg	utr3	ENSMUSG00000039395	ProperStrand	63	chr2	79843543	79843559	protein_coding	Pde1a	intron	ENSMUSG00000059173	NonProperStrand	275	1	-10.1636
chr4	153374008	153374063	protein_coding	BC046331	intron	ENSMUSG00000039523	ProperStrand	6	chr9	15119319	15119409	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-9.8106
chr2	24205199	24205215	protein_coding	Il1rn	utr3	ENSMUSG00000026981	ProperStrand	45	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.8074
chr12	110918156	110918221	snoRNA	ENSMUSG00000065749_AF357428	.	ENSMUSG00000065749	ProperStrand	218	chr18	35714189	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-1.3133
chr2	90235286	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	150293597	150472230	protein_coding	Kcnq1	intron	ENSMUSG00000009545	NonProperStrand	133	3	-7.6150
chr3	107081857	107081875	protein_coding	Hbxip	exon	ENSMUSG00000087260	ProperStrand	7	chr5	115939521	115939583	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-12.2821
chr8	125025087	125025119	protein_coding	Fam38a	utr5	ENSMUSG00000014444	ProperStrand	132	chr11	78313939	78313956	protein_coding	Vtn	exon	ENSMUSG00000017344	ProperStrand	188	1	-9.4407
chr11	70465672	70466337	protein_coding	Pfn1	exon	ENSMUSG00000018293	ProperStrand	55	chr16	23110913	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-0.9304
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr14	123234184	123234201	protein_coding	Pcca	intron	ENSMUSG00000041650	ProperStrand	13	1	-7.5011
chr4	129333699	129333779	protein_coding-noncoding	Kpna6	utr3	ENSMUSG00000003731	ProperStrand	1	chr4	108181667	108181757	protein_coding	Zcchc11	intron	ENSMUSG00000034610	ProperStrand	35	1	-inf
chr4	116962009	116962033	protein_coding	Rnf220	utr5	ENSMUSG00000028677	ProperStrand	131	chr9	78215858	78215914	protein_coding	Dppa5a	utr5	ENSMUSG00000060461	ProperStrand	79	1	-11.1923
chr17	31722744	31722760	protein_coding	Pknox1	intron	ENSMUSG00000006705	ProperStrand	110	chr19	8799022	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-4.6562
chr12	110888956	110889007	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr18	80950696	80951029	protein_coding	Atp9b	exon	ENSMUSG00000024566	ProperStrand	30	2	-15.9148
chr5	65952377	65952395	protein_coding	Ube2k	intron	ENSMUSG00000029203	ProperStrand	289	chr19	9043871	9043971	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	2	-10.2538
chr13	43233301	43233318	protein_coding	Phactr1	utr3	ENSMUSG00000054728	NonProperStrand	10	chr12	17552983	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	3	-19.3075
chr17	59135251	59135267	LTR	ORR1A2	MaLR	chr17ORR1A259135069	NonProperStrand	12	chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	1	-13.1568
chr3	41856450	41856540	LINE	L1_Mus2	L1	chr3L1_Mus241854012	ProperStrand	1	chr5	89901094	89901174	LINE	L1_Mus1	L1	chr5L1_Mus189900221	ProperStrand	1	1	-inf
chr4	10826358	10826375	protein_coding	2610301B20Rik	utr3	ENSMUSG00000059482	NonProperStrand	3	chr4	131866155	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-16.5067
chr16	15629633	15629680	protein_coding	Mcm4	exon	ENSMUSG00000022673	ProperStrand	51	chr11	62416606	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-5.4833
chr2	14712911	14712935	protein_coding	Cacnb2	intron	ENSMUSG00000057914	NonProperStrand	11	chr16	23111374	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-14.1640
chr2	32818852	32818942	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	chr1	187066791	187066871	snoRNA	ENSMUSG00000077571_Snora36b	.	ENSMUSG00000077571	ProperStrand	244	1	-2.8435
chr9	15119631	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	chr2	91436228	91436338	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	22	-11.3049
chr4	58083061	58083077	protein_coding	Svep1	exon	ENSMUSG00000028369	ProperStrand	54	chr18	35716730	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.3452
chr14	22612169	22612226	protein_coding	Samd8	exon	ENSMUSG00000021770	ProperStrand	25	chr4	131865929	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.2649
chr4	116826989	116828207	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	chr18	35716762	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	7	-5.4514
chr4	117360377	117360467	LTR	MER21B	ERV1	chr4MER21B117360246	ProperStrand	1	chr4	117360552	117360642	SINE	ID_B1	B4	chr4ID_B1117360530	NonProperStrand	1	1	-inf
chr3	146127659	146127713	protein_coding	Ctbs	utr3	ENSMUSG00000028189	ProperStrand	6	chr10	23505152	23505252	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-5.3874
chr11	87019530	87020332	protein_coding	Trim37	exon	ENSMUSG00000018548	ProperStrand	17	chr10	80641723	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	3	-20.1451
chr13	36509911	36509970	protein_coding	Fars2	intron	ENSMUSG00000021420	ProperStrand	19	chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-8.1438
chr19	4923089	4923189	protein_coding	Dpp3	exon	ENSMUSG00000063904	ProperStrand	36	chr1	162967490	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.4356
chr5	24805443	24805533	protein_coding	Mll3	exon	ENSMUSG00000038056	ProperStrand	31	chr17	35299558	35299638	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-6.0702
chr10	23506224	23506304	protein_coding	Rps12	intron	ENSMUSG00000061983	ProperStrand	309	chr2	130101996	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-2.3377
chr5	109063677	109063694	protein_coding	Tmem175	intron	ENSMUSG00000013495	ProperStrand	31	chr17	39985423	39985499	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-7.2447
chr15	96472515	96472533	protein_coding	Slc38a1	intron	ENSMUSG00000023169	ProperStrand	69	chr2	145076805	145209256	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-7.4447
chr4	133631715	133631732	protein_coding	Aim1l	exon	ENSMUSG00000012123	ProperStrand	32	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-10.6373
chr1	75484537	75484553	protein_coding	Obsl1	exon	ENSMUSG00000026211	NonProperStrand	192	chr11	6428035	6428087	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.2975
chr11	92960818	92960835	protein_coding	Car10	utr5	ENSMUSG00000056158	ProperStrand	25	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-9.5028
chr13	12507722	12507800	protein_coding	Heatr1	exon	ENSMUSG00000050244	ProperStrand	74	chr18	33954843	33954877	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-3.1238
chr11	120392112	120392128	antisense	Gm11789	.	ENSMUSG00000084983	ProperStrand	4	chr7	116663689	116663768	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-13.1590
chr7	34989059	35015238	protein_coding	Gpi1	exon	ENSMUSG00000036427	ProperStrand	288	chr4	131908688	131908893	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	8	-2.5369
chr5	31369914	31369952	protein_coding	Cad	exon	ENSMUSG00000013629	ProperStrand	260	chr17	46817681	46817698	protein_coding	Klhdc3	utr5	ENSMUSG00000063576	ProperStrand	35	1	-11.4618
chr4	138932677	138932693	lincRNA	2700016F22Rik	exon	ENSMUSG00000091188	ProperStrand	3	chr12	32003185	32003224	protein_coding	Lamb1	exon	ENSMUSG00000002900	ProperStrand	87	3	-inf
chr3	145311608	145311694	protein_coding	Cyr61	exon	ENSMUSG00000028195	ProperStrand	13	chr5	130300476	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	4	-17.1616
chr16	90926159	90926199	protein_coding	1110004E09Rik	utr3	ENSMUSG00000022972	ProperStrand	8	chr13	14729591	14729643	protein_coding	AW209491	exon	ENSMUSG00000039182	ProperStrand	4	1	-19.5686
chr17	24858604	24858653	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr12	17552997	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-1.8105
chr7	109616950	109616992	protein_coding	Rrm1	exon	ENSMUSG00000030978	ProperStrand	14	chr17	24857748	24857851	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.9973
chr11	100181434	100182045	protein_coding	Eif1	exon	ENSMUSG00000035530	ProperStrand	115	chr1	162967530	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-2.3272
chr10	76551684	76558753	protein_coding	Col18a1	exon	ENSMUSG00000001435	ProperStrand	287	chr1	34224710	34224791	protein_coding	Dst	exon	ENSMUSG00000026131	ProperStrand	461	1	-6.1226
chr5	76671009	76671863	protein_coding	Clock	exon	ENSMUSG00000029238	ProperStrand	16	chr4	131908752	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	7	-21.0195
chr13	107723988	107724023	protein_coding	Ipo11	intron	ENSMUSG00000042590	ProperStrand	120	chrX	34622906	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	3	-5.4624
chr1	63225434	63225471	protein_coding	Eef1b2	exon	ENSMUSG00000025967	ProperStrand	106	chr19	8799058	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	4	-14.8347
chr1	45879775	45879801	protein_coding	Wdr75	exon	ENSMUSG00000025995	ProperStrand	24	chr1	162967118	162967178	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	1	-10.5303
chr2	12998945	12999045	protein_coding	Rsu1	utr3	ENSMUSG00000026727	ProperStrand	13	chr8	13416897	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	3	-inf
chrX	84483692	84483755	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr7	109149271	109149287	protein_coding	Numa1	exon	ENSMUSG00000066306	NonProperStrand	171	2	-10.0040
chr11	70489224	70489902	protein_coding	Camta2	exon	ENSMUSG00000040712	ProperStrand	16	chr5	39063973	39063991	protein_coding	Zfp518b	exon	ENSMUSG00000046572	NonProperStrand	1	1	-inf
chr4	69884101	69889636	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	chr5	115694041	115694097	protein_coding	Rnf10	exon	ENSMUSG00000041740	ProperStrand	95	1	-7.1937
chr19	45943398	45943488	protein_coding	9130011E15Rik	intron	ENSMUSG00000039901	ProperStrand	129	chr11	101873162	101873242	protein_coding	Mpp3	intron	ENSMUSG00000052373	ProperStrand	2	1	-inf
chr13	104840853	104840869	protein_coding	Nln	exon	ENSMUSG00000021710	ProperStrand	47	chr7	67123698	67123759	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	1	-10.0302
chr12	113725965	113726045	Simple_repeat	(CA)n	Simple_repeat	chr12(CA)n113725976	ProperStrand	1	chr14	65614718	65614808	protein_coding	Ints9	intron	ENSMUSG00000021975	ProperStrand	10	1	-inf
chr3	159094448	159094468	LINE	Lx2B	L1	chr3Lx2B159093657	ProperStrand	1	chr4	150538028	150538044	protein_coding	Camta1	exon	ENSMUSG00000014592	ProperStrand	170	1	-inf
chr2	4974190	4974207	protein_coding	Optn	exon	ENSMUSG00000026672	ProperStrand	451	chr5	33773863	33773879	protein_coding	Nkx1-1	exon	ENSMUSG00000029112	ProperStrand	1	1	-inf
chr9	98490536	98490618	protein_coding	Mrps22	intron	ENSMUSG00000032459	ProperStrand	2	chr16	23111777	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-8.9529
chr5	3693225	3693242	protein_coding	Ankib1	exon	ENSMUSG00000040351	NonProperStrand	98	chr7	117190016	117190056	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.4658
chr9	78023109	78023159	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr16	8830404	8830504	protein_coding	1810013L24Rik	utr5	ENSMUSG00000022507	ProperStrand	20	1	-8.0753
chr2	157105061	157109325	protein_coding	4922505G16Rik	utr5	ENSMUSG00000074627	ProperStrand	12	chr5	121655016	121655097	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	3	-15.9648
chr9	78023113	78023200	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr1	172955699	172955717	protein_coding	Fcgr4	exon	ENSMUSG00000059089	NonProperStrand	1	1	-inf
chr11	22879452	22879470	protein_coding	Commd1	intron	ENSMUSG00000051355	ProperStrand	36	chr9	120038467	120038552	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.9810
chr16	64851346	64851368	Simple_repeat	(CCG)n	Simple_repeat	chr16(CCG)n64851329	NonProperStrand	15	chr16	17894461	17894477	protein_coding	Tssk1	exon	ENSMUSG00000041566	NonProperStrand	62	1	-16.1063
chr2	7190772	7190852	LTR	ORR1E-int	MaLR	chr2ORR1E-int7190779	NonProperStrand	1	chr10	75470481	75470571	protein_coding	Gm5134	intron	ENSMUSG00000033255	NonProperStrand	4	1	-inf
chr7	4479137	4479155	antisense	Gm15873	.	ENSMUSG00000085725	ProperStrand	2	chr4	155318059	155318118	protein_coding	Ube2j2	utr5	ENSMUSG00000023286	ProperStrand	35	1	-inf
chr7	52958453	52958469	protein_coding	Car11	exon	ENSMUSG00000003273	NonProperStrand	250	chr9	15118245	15118305	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-1.1456
chr13	21284068	21284135	protein_coding	Trim27	exon	ENSMUSG00000021326	ProperStrand	28	chr4	131866159	131866249	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-5.1223
chr16	33497398	33497443	protein_coding	Zfp148	exon	ENSMUSG00000022811	ProperStrand	10	chr11	69414482	69414498	protein_coding	Atp1b2	utr3	ENSMUSG00000041329	ProperStrand	28	1	-18.1892
chr6	30679761	30679780	protein_coding	Mest	intron	ENSMUSG00000051855	ProperStrand	11	chr1	72290878	72290974	snRNA	ENSMUSG00000093111_AC120136.1	.	ENSMUSG00000093111	ProperStrand	137	1	-15.1325
chrX	148335542	148335565	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	chrX	7752870	7752886	protein_coding	Tbc1d25	exon	ENSMUSG00000039201	ProperStrand	126	1	-7.5834
chr18	10052133	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr3	145142817	145142833	protein_coding	Col24a1	exon	ENSMUSG00000028197	ProperStrand	33	1	-10.0052
chr13	54848608	54848624	protein_coding	Gprin1	intron	ENSMUSG00000069227	ProperStrand	55	chr8	73419743	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.2879
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr2	130101988	130102088	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-1.4715
chr8	73438446	73438553	protein_coding	Mtap1s	exon	ENSMUSG00000019261	ProperStrand	60	chr7	29136619	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.3649
chr9	84508620	84508700	LINE	Lx8	L1	chr9Lx884508334	NonProperStrand	1	chr9	84508955	84509045	LINE	Lx9	L1	chr9Lx984508960	ProperStrand	1	1	-inf
chr4	136876246	136876373	protein_coding	Cdc42	utr3	ENSMUSG00000006699	ProperStrand	38	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	1	-7.9404
chr15	85730118	85730197	protein_coding	Celsr1	utr3	ENSMUSG00000016028	ProperStrand	56	chr4	131908805	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.3189
chr7	146101110	146101170	protein_coding	Bnip3	utr5	ENSMUSG00000078566	ProperStrand	20	chr4	131866155	131866245	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-5.7884
chr4	93149114	93149130	lincRNA	Gm12649	intron	ENSMUSG00000084833	ProperStrand	3	chr9	15119683	15119755	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-8.7352
chr10	41904802	41904844	protein_coding	Foxo3	utr3	ENSMUSG00000048756	ProperStrand	59	chr4	131908689	131908710	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-2.4025
chr2	164651405	164651452	protein_coding	Zswim1	exon	ENSMUSG00000017764	ProperStrand	68	chr1	3661500	3661517	protein_coding	Xkr4	utr5	ENSMUSG00000051951	ProperStrand	59	1	-13.0941
chr11	50114488	50115281	protein_coding	Canx	exon	ENSMUSG00000020368	NonProperStrand	6	chr7	148634750	148634839	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	NonProperStrand	18	3	-18.8562
chr11	117016646	117016696	protein_coding	Sec14l1	exon	ENSMUSG00000020823	ProperStrand	71	chrX	34622928	34623018	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-2.8703
chr17	56849635	56850087	protein_coding	Ranbp3	exon	ENSMUSG00000002372	ProperStrand	34	chr17	35087894	35087931	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-6.3177
chr7	20341647	20341682	protein_coding	Bcam	utr3	ENSMUSG00000002980	ProperStrand	43	chr19	42405846	42405863	protein_coding	Crtac1	intron	ENSMUSG00000042401	NonProperStrand	17	1	-16.6081
chr9	70960076	70960093	protein_coding	Aqp9	exon	ENSMUSG00000032204	NonProperStrand	118	chr15	82980078	82980189	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-5.8044
chr12	13236183	13236230	protein_coding	Ddx1	exon	ENSMUSG00000037149	ProperStrand	47	chr7	118219574	118219637	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-4.6367
chr17	34787579	34787753	protein_coding	Atf6b	exon	ENSMUSG00000015461	ProperStrand	11	chr15	34370597	34370676	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-6.8789
chr6	125410451	125410553	protein_coding	Cd9	utr3	ENSMUSG00000030342	ProperStrand	81	chr16	23110845	23110907	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-1.4289
chr4	149603573	149603639	SINE	PB1D9	Alu	chr4PB1D9149603570	NonProperStrand	4	chr10	23505152	23505203	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-inf
chr12	40940048	40940075	protein_coding	Ifrd1	intron	ENSMUSG00000001627	ProperStrand	37	chr4	131908356	131908429	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.1700
chr10	77874149	77874181	protein_coding	Rrp1	exon	ENSMUSG00000061032	ProperStrand	177	chr4	116826700	116826766	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	2	-7.7302
chr7	109268991	109343317	protein_coding	Nup98	utr5	ENSMUSG00000063550	ProperStrand	100	chr16	23110828	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-2.1399
chr17	85482653	85489599	protein_coding	Prepl	utr5	ENSMUSG00000024127	ProperStrand	106	chr18	35716772	35716799	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.3004
chr7	114588571	114588591	protein_coding	Syt9	intron	ENSMUSG00000062542	NonProperStrand	6	chr19	60850303	60850365	snoRNA	ENSMUSG00000065167_Snora19	.	ENSMUSG00000065167	ProperStrand	10	1	-19.0093
chr12	56700673	56700692	protein_coding	Insm2	exon	ENSMUSG00000045440	NonProperStrand	22	chr3	68889176	68889243	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-5.1648
chr11	77744349	77744365	protein_coding	Sez6	utr5	ENSMUSG00000000632	NonProperStrand	8	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-15.8164
chr5	137441811	137441853	protein_coding	Fis1	exon	ENSMUSG00000019054	ProperStrand	12	chr10	23505152	23505230	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.9771
chr4	118805272	118805785	protein_coding	Slc2a1	exon	ENSMUSG00000028645	ProperStrand	361	chr8	87426786	87426805	protein_coding	Klf1	exon	ENSMUSG00000054191	NonProperStrand	70	1	-9.4088
chr19	25484358	25484374	protein_coding	Kank1	exon	ENSMUSG00000032702	ProperStrand	218	chr4	8754213	8754240	protein_coding	Chd7	exon	ENSMUSG00000041235	ProperStrand	80	1	-10.1479
chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	chr11	77996588	77996624	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-2.8153
chr11	75306885	75306939	protein_coding	Prpf8	exon	ENSMUSG00000020850	ProperStrand	255	chr14	55476645	55476661	protein_coding	Homez	exon	ENSMUSG00000057156	NonProperStrand	127	1	-8.9098
chr2	91823016	91823106	protein_coding	Creb3l1	utr3	ENSMUSG00000027230	ProperStrand	12	chr19	8800355	8800435	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-6.6789
chr16	20686696	20686897	protein_coding	Eif4g1	exon	ENSMUSG00000045983	ProperStrand	199	chr16	38158200	38158226	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	1	-6.2697
chr1	45448521	45448537	protein_coding	Col5a2	exon	ENSMUSG00000026042	ProperStrand	184	chr17	39985500	39985520	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-3.7819
chr8	26937734	26937798	protein_coding	Ash2l	exon	ENSMUSG00000031575	ProperStrand	113	chr7	148634753	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-2.8315
chr7	112782969	112782985	protein_coding	Arfip2	utr3	ENSMUSG00000030881	ProperStrand	191	chr9	15119302	15119397	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-2.9454
chr9	30897389	30897445	protein_coding	St14	utr3	ENSMUSG00000031995	ProperStrand	90	chr5	54389950	54389967	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	1	-9.9674
chr16	4544859	4544949	protein_coding	Tfap4	utr3	ENSMUSG00000005718	ProperStrand	15	chr1	193655194	193655274	protein_coding	Nek2	utr3	ENSMUSG00000026622	ProperStrand	12	1	-19.6590
chr11	68786480	68786631	protein_coding	Rangrf	exon	ENSMUSG00000032892	ProperStrand	3	chr16	23111722	23111758	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-inf
chr5	143666929	143667001	protein_coding	Actb	exon	ENSMUSG00000029580	ProperStrand	446	chr4	96412508	96412526	protein_coding	Gm12695	intron	ENSMUSG00000078639	ProperStrand	110	1	-8.0842
chr5	113522177	113522195	protein_coding	2900026A02Rik	exon	ENSMUSG00000051339	NonProperStrand	29	chr2	26494786	26494842	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.4659
chr7	19591412	19591428	protein_coding	Irf2bp1	exon	ENSMUSG00000044030	NonProperStrand	81	chr11	62418027	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-4.9737
chr3	97570626	97570642	protein_coding	Pde4dip	exon	ENSMUSG00000038170	ProperStrand	25	chr1	89673679	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	2	-8.1629
chr17	64658426	64658444	protein_coding	Pja2	exon	ENSMUSG00000024083	ProperStrand	27	chr2	156376648	156376665	protein_coding	0610011L14Rik	exon	ENSMUSG00000027628	NonProperStrand	9	1	-18.5926
chr7	95266597	95266613	protein_coding	Grm5	intron	ENSMUSG00000049583	NonProperStrand	145	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.3147
chr3	156224612	156224628	lincRNA	4930570G19Rik	exon	ENSMUSG00000085084	ProperStrand	326	chr11	6428098	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-1.3745
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr1	59696303	59696368	protein_coding	Sumo1	utr3	ENSMUSG00000026021	ProperStrand	9	3	-inf
chr17	24710438	24710512	protein_coding	Pkd1	exon	ENSMUSG00000032855	ProperStrand	61	chr9	95524999	95525035	snoRNA	ENSMUSG00000065346_SNORA4	.	ENSMUSG00000065346	ProperStrand	142	1	-11.5509
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr12	58691976	58691992	antisense	4921518K17Rik	.	ENSMUSG00000085851	ProperStrand	75	1	-4.0395
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr6	131330290	131330390	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	ProperStrand	408	1	-4.5538
chr8	13416896	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr16	32230671	32230690	protein_coding	Fbxo45	utr3	ENSMUSG00000035764	NonProperStrand	10	1	-10.0944
chr2	144096189	144096206	protein_coding	Snx5	utr5	ENSMUSG00000027423	NonProperStrand	2	chr16	23110843	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr2	181405343	181405359	protein_coding	Sox18	exon	ENSMUSG00000046470	ProperStrand	96	chr2	38859681	38860252	protein_coding	Rpl35	exon	ENSMUSG00000062997	ProperStrand	68	1	-12.1171
chr11	72495280	72495314	protein_coding	Ube2g1	intron	ENSMUSG00000020794	ProperStrand	25	chr4	131865855	131865889	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.2649
chr15	84686395	84686414	protein_coding	Phf21b	utr5	ENSMUSG00000016624	ProperStrand	3	chr6	35160972	35162745	protein_coding	Nup205	exon	ENSMUSG00000038759	ProperStrand	56	1	-22.6255
chr19	44377495	44379529	protein_coding	Scd2	exon	ENSMUSG00000025203	ProperStrand	219	chr3	123210854	123210979	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-0.9392
chr8	13876097	13876187	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	11	-15.1478
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr5	76045639	76045658	protein_coding	Kit	exon	ENSMUSG00000005672	ProperStrand	58	1	-8.0422
chr9	58471650	58475676	protein_coding	Nptn	exon	ENSMUSG00000032336	ProperStrand	25	chr17	13115737	13115784	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	1	-9.2955
chr19	8800369	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	23	-3.4490
chr17	35273073	35279007	protein_coding	Bag6	exon	ENSMUSG00000024392	ProperStrand	181	chr4	131908236	131908451	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	6	-3.6950
chr6	149098869	149098885	protein_coding	4833442J19Rik	exon	ENSMUSG00000039958	ProperStrand	2	chr8	32260336	32260426	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-12.0137
chr3	90310543	90310575	protein_coding	2500003M10Rik	utr5	ENSMUSG00000001017	ProperStrand	28	chr1	157912218	157912270	protein_coding	Tor1aip2	exon	ENSMUSG00000050565	ProperStrand	31	1	-16.1545
chr11	63778023	63789781	protein_coding	Cox10	exon	ENSMUSG00000042148	ProperStrand	21	chr18	33954922	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-5.5219
chr7	118219854	118220249	protein_coding	Eif4g2	exon	ENSMUSG00000005610	ProperStrand	134	chr7	52381627	52381685	protein_coding	Rpl13a	intron	ENSMUSG00000074129	ProperStrand	269	1	-8.6962
chr7	108975835	108975853	protein_coding	Inppl1	exon	ENSMUSG00000032737	NonProperStrand	2	chr13	96100595	96100692	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	1	-15.5348
chr19	5796215	5801787	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr11	62418013	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	2	-1.4855
chr5	74489218	74489308	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr11	116533822	116533890	snoRNA	ENSMUSG00000065640_Snord1c	.	ENSMUSG00000065640	ProperStrand	373	1	-2.2519
chr2	168426894	168426910	protein_coding	Nfatc2	intron	ENSMUSG00000027544	NonProperStrand	49	chr7	30193429	30193448	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	1	-9.2535
chr2	105238302	105238380	protein_coding	Rcn1	intron	ENSMUSG00000005973	ProperStrand	24	chr2	25105521	25107254	protein_coding	Ndor1	exon	ENSMUSG00000006471	NonProperStrand	84	1	-14.5029
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	1	-4.2847
chr8	71637140	71637177	protein_coding	Atp6v1b2	utr3	ENSMUSG00000006273	ProperStrand	29	chr1	88252837	88252899	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	3	-18.1823
chr17	35643110	35643200	protein_coding	Pou5f1	exon	ENSMUSG00000024406	ProperStrand	104	chr7	117189944	117190024	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.3653
chr3	85592511	85592529	protein_coding	Arfip1	intron	ENSMUSG00000074513	ProperStrand	49	chr7	118219692	118219740	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-7.5798
chr4	155547399	155547489	protein_coding-noncoding	Agrn	utr3	ENSMUSG00000041936	ProperStrand	1	chr12	55797768	55797848	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	1	-inf
chr3	113331288	113332844	protein_coding	Rnpc3	exon	ENSMUSG00000027981	ProperStrand	9	chr1	74902715	74902731	protein_coding	Cdk5r2	exon	ENSMUSG00000090071	NonProperStrand	49	1	-17.5984
chr2	158185528	158185563	lincRNA	9430008C03Rik	exon	ENSMUSG00000085385	ProperStrand	1039	chr19	21909951	21910061	protein_coding	Tmem2	exon	ENSMUSG00000024754	ProperStrand	133	1	-6.0402
chr10	82456766	82456783	protein_coding	Chst11	intron	ENSMUSG00000034612	ProperStrand	170	chr7	4694685	4697420	protein_coding	Suv420h2	exon	ENSMUSG00000059851	ProperStrand	60	1	-11.2239
chr17	10671969	10672069	antisense	A230009B12Rik	.	ENSMUSG00000089633	ProperStrand	4	chr16	23110981	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.6489
chr7	13508381	13508399	protein_coding	Rps5	exon	ENSMUSG00000012848	ProperStrand	108	chr15	98350193	98350283	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	2	-6.1799
chr4	134300867	134300918	protein_coding	Ldlrap1	utr3	ENSMUSG00000037295	ProperStrand	18	chr17	39985128	39985153	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	2	-13.3542
chr2	123260569	123260649	LINE	Lx9	L1	chr2Lx9123260228	ProperStrand	1	chr5	69280478	69280568	LINE	L1_Mus1	L1	chr5L1_Mus169279865	NonProperStrand	1	1	-inf
chr17	35972507	35972597	protein_coding	Tubb5	exon	ENSMUSG00000001525	ProperStrand	624	chrX	103390096	103392230	protein_coding	Pgk1	exon	ENSMUSG00000062070	ProperStrand	484	1	-4.5272
chr4	130224865	130224965	protein_coding	Pum1	exon	ENSMUSG00000028580	ProperStrand	131	chr17	24665455	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-3.4673
chr11	78313939	78313956	protein_coding	Vtn	exon	ENSMUSG00000017344	ProperStrand	188	chr11	98694497	98694517	protein_coding	Casc3	utr3	ENSMUSG00000078676	ProperStrand	33	1	-12.2289
chr1	71644007	71644107	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr19	8798742	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	2	-1.0522
chr7	108147252	108147332	protein_coding	P2ry2	exon	ENSMUSG00000032860	ProperStrand	1	chr12	106269338	106269428	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-inf
chr12	86374937	86381575	protein_coding	Ylpm1	exon	ENSMUSG00000021244	ProperStrand	100	chr2	32818833	32818902	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-4.4843
chr11	98666804	98666894	protein_coding	Msl1	utr3	ENSMUSG00000052915	ProperStrand	8	chr16	23110901	23110981	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.2180
chr3	108228259	108228275	protein_coding	Sars	utr3	ENSMUSG00000068739	NonProperStrand	200	chr7	52381975	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-4.3701
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr4	131908688	131908810	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	9	-3.9752
chr9	110089303	110089382	protein_coding	Smarcc1	exon	ENSMUSG00000032481	ProperStrand	108	chr2	130102053	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-4.2268
chr17	38142731	38142812	LTR	MTD-int	MaLR	chr17MTD-int38142373	ProperStrand	40	chr17	38142863	38142953	LTR	MTD-int	MaLR	chr17MTD-int38142831	ProperStrand	40	40	-inf
chr5	3693225	3693241	protein_coding	Ankib1	exon	ENSMUSG00000040351	NonProperStrand	98	chr1	117828717	117828734	protein_coding	Cntnap5a	intron	ENSMUSG00000070695	NonProperStrand	9	1	-16.1855
chr18	68038299	68040405	protein_coding	Cep192	exon	ENSMUSG00000024542	NonProperStrand	16	chr1	102076758	102076790	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	1	-12.1204
chr11	116106749	116106829	protein_coding	Srp68	utr3	ENSMUSG00000020780	ProperStrand	42	chr2	158185579	158185669	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	6	-inf
chr18	36124514	36124530	protein_coding	Psd2	utr5	ENSMUSG00000024347	NonProperStrand	1	chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-inf
chr9	120297446	120326268	protein_coding	Myrip	exon	ENSMUSG00000041794	ProperStrand	25	chr19	8798484	8798501	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-6.9443
chr11	70800375	70800391	protein_coding	Dhx33	utr3	ENSMUSG00000040620	NonProperStrand	14	chr11	87158469	87158489	protein_coding	Ppm1e	intron	ENSMUSG00000046442	NonProperStrand	5	1	-20.6519
chr9	30976417	31019347	protein_coding	Aplp2	exon	ENSMUSG00000031996	ProperStrand	172	chr15	5068431	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	2	-6.7659
chr1	172749445	172749480	protein_coding	Atf6	exon	ENSMUSG00000026663	ProperStrand	35	chr9	42913544	42913579	protein_coding	Arhgef12	utr5	ENSMUSG00000059495	ProperStrand	16	1	-17.0706
chr1	127290633	127291710	protein_coding	Actr3	exon	ENSMUSG00000026341	ProperStrand	45	chr15	5068589	5068632	protein_coding	Rpl37	exon	ENSMUSG00000041841	ProperStrand	69	1	-13.6147
chrX	99380384	99382713	protein_coding	Rps4x	exon	ENSMUSG00000031320	ProperStrand	139	chr7	116664794	116664909	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-2.3776
chr3	153991597	153991614	protein_coding	Lhx8	utr5	ENSMUSG00000093486	NonProperStrand	47	chr2	22444485	22444517	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-8.2653
chrX	74905125	74905160	protein_coding	Tbl1x	utr3	ENSMUSG00000025246	ProperStrand	56	chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	1	-8.9674
chr2	152509377	152509444	protein_coding	H13	intron	ENSMUSG00000019188	ProperStrand	15	chr2	160721184	160721200	protein_coding	Lpin3	exon	ENSMUSG00000027412	ProperStrand	31	1	-17.3237
chr3	116583722	116583758	protein_coding	Frrs1	exon	ENSMUSG00000033386	ProperStrand	27	chr11	68886928	68887018	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	4	-17.5514
chr3	73781501	73781591	LINE	Lx2B	L1	chr3Lx2B73781474	ProperStrand	1	chr3	73781622	73781702	SINE	B3A	B2	chr3B3A73781629	ProperStrand	1	1	-inf
chr1	4766742	4766776	protein_coding	Mrpl15	exon	ENSMUSG00000033845	ProperStrand	34	chr11	69481335	69481456	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	7	-19.1648
chr17	33960032	33961382	protein_coding	Rps28	utr3	ENSMUSG00000067288	ProperStrand	52	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.0198
chr1	20925550	20925576	protein_coding	Paqr8	exon	ENSMUSG00000025931	ProperStrand	3	chr11	74718963	74719009	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	1	-15.4233
chr3	152091173	152091273	protein_coding	Zzz3	exon	ENSMUSG00000039068	ProperStrand	26	chr3	123210854	123210877	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.5360
chr6	122678021	122687173	protein_coding	Slc2a3	utr3	ENSMUSG00000003153	ProperStrand	682	chr16	23110454	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	9	-2.9162
chr17	13117206	13117306	protein_coding	Tcp1	exon	ENSMUSG00000068039	ProperStrand	116	chr10	39978410	39978484	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-4.1919
chr19	9018593	9020258	protein_coding	Mta2	exon	ENSMUSG00000071646	ProperStrand	70	chr16	23111447	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.0543
chr7	31098945	31098961	protein_coding	Alkbh6	exon	ENSMUSG00000042831	NonProperStrand	22	chr2	26494763	26494826	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.0039
chr3	7186508	7186598	LINE	L1Md_F2	L1	chr3L1Md_F27186415	ProperStrand	1	chr18	62554371	62554451	protein_coding	Htr4	intron	ENSMUSG00000026322	NonProperStrand	5	1	-inf
chr17	6365293	6365311	lincRNA	Gm17692	intron	ENSMUSG00000091795	ProperStrand	4	chr1	161270415	161270444	snoRNA	ENSMUSG00000089536_Scarna3a	.	ENSMUSG00000089536	ProperStrand	247	1	-16.1766
chr2	63936034	63936053	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr19	8799831	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	3	-2.0587
chr11	97546549	97546595	protein_coding	Mllt6	utr3	ENSMUSG00000038437	ProperStrand	110	chr2	130101983	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-4.1922
chr7	36427127	36427646	protein_coding	Pdcd5	utr3	ENSMUSG00000030417	ProperStrand	8	chr11	69481397	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-7.1653
chrX	131140081	131140171	protein_coding	Hnrnph2	exon	ENSMUSG00000045427	ProperStrand	111	chr10	107800720	107800800	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	1	-6.8467
chr12	41464082	41464099	protein_coding	Dock4	exon	ENSMUSG00000035954	ProperStrand	41	chr17	13112472	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	2	-8.7400
chr17	72065533	72065623	protein_coding-noncoding	Fam179a	utr5	ENSMUSG00000045761	NonProperStrand	1	chr17	72065772	72065852	protein_coding	Fam179a	exon	ENSMUSG00000045761	NonProperStrand	3	1	-inf
chr15	82179330	82179423	protein_coding	1500032L24Rik	utr3	ENSMUSG00000022452	ProperStrand	4	chr4	131908236	131908295	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-6.5415
chr4	106334422	106334438	LTR	ORR1A2	MaLR	chr4ORR1A2106334355	ProperStrand	4	chr10	23505152	23505235	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-inf
chrX	83534601	83534621	protein_coding	Mageb4	intron	ENSMUSG00000035427	NonProperStrand	191	chr14	11815940	11815957	protein_coding	Fhit	intron	ENSMUSG00000060579	ProperStrand	32	1	-12.2605
chr11	4941922	4941983	protein_coding	Ap1b1	utr3	ENSMUSG00000009090	ProperStrand	43	chr15	98350177	98350267	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-5.4077
chr10	93321440	93321540	protein_coding	Metap2	utr3	ENSMUSG00000036112	NonProperStrand	1	chr7	116664819	116664872	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-inf
chr7	136800631	136800649	SINE	RSINE1	B4	chr7RSINE1136800606	ProperStrand	216	chr1	88252837	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-4.1561
chr11	116405873	116405890	protein_coding	Ube2o	exon	ENSMUSG00000020802	NonProperStrand	1	chr6	71832579	71832687	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-inf
chr12	35923478	35923496	LINE	Lx2	L1	chr12Lx235923353	ProperStrand	1	chr17	13206353	13206400	protein_coding	Sod2	exon	ENSMUSG00000006818	ProperStrand	17	1	-inf
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr9	64143809	64143875	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-3.5286
chr1	182516041	182516100	protein_coding	Parp1	exon	ENSMUSG00000026496	ProperStrand	227	chr9	15118518	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	1	-6.6929
chr11	103256208	103256246	protein_coding	Plekhm1	exon	ENSMUSG00000034247	ProperStrand	23	chr7	118219574	118219609	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-6.0392
chr4	116862573	116862663	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	chr13	96100597	96100677	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	1	-3.7256
mmu-miR-1912-5p	0	17	miRNA	mmu-miR-1912-5p	.	mmu-miR-1912-5p	NonProperStrand	36	chr1	164627735	164627835	protein_coding	Prrc2c	exon	ENSMUSG00000040225	ProperStrand	413	1	-10.4795
chr14	51427119	51427209	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr8	109063063	109063768	protein_coding	Cdh3	exon	ENSMUSG00000061048	ProperStrand	62	1	-7.1440
chr5	123250532	123252150	protein_coding	Anapc5	exon	ENSMUSG00000029472	ProperStrand	92	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.8590
chr5	121655127	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	chr11	6520321	6520421	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	8	-4.0240
chr17	28336285	28336301	protein_coding	Zfp523	intron	ENSMUSG00000024220	NonProperStrand	2	chr1	89673592	89673642	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-10.5460
chr8	72591512	72591592	protein_coding	Sugp1	intron	ENSMUSG00000011306	ProperStrand	20	chr15	102313705	102314660	protein_coding	Pcbp2	intron	ENSMUSG00000056851	ProperStrand	164	1	-13.5248
chr11	50079182	50079214	protein_coding	Maml1	exon	ENSMUSG00000050567	ProperStrand	29	chr19	8800375	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	3	-11.6921
chr19	46836213	46836229	protein_coding	Cnnm2	utr5	ENSMUSG00000064105	NonProperStrand	19	chr16	23110845	23110875	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7016
chr4	133521251	133521313	protein_coding	Hmgn2	utr3	ENSMUSG00000003038	ProperStrand	20	chr15	79913288	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	3	-13.3822
chr15	35029196	35029248	protein_coding	Stk3	exon	ENSMUSG00000022329	ProperStrand	13	chr15	34370544	34370563	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-10.6671
chr3	89930456	89930483	snoRNA	ENSMUSG00000064930_SNORA41	.	ENSMUSG00000064930	ProperStrand	7	chr18	33954874	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	3	-17.8941
chrX	33094710	33094727	LTR	RodERV21-int	ERV1	chrXRodERV21-int33094516	NonProperStrand	8	chr1	162965531	162965584	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-7.2483
chr10	82456766	82456784	protein_coding	Chst11	intron	ENSMUSG00000034612	ProperStrand	170	chr16	23111703	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	8	-8.7252
chr1	177823041	177823057	protein_coding	Exo1	exon	ENSMUSG00000039748	ProperStrand	27	chr16	23110527	23110563	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.9061
chr13	58503699	58503716	protein_coding	Hnrnpk	intron	ENSMUSG00000021546	NonProperStrand	13	chr8	73419657	73419757	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-6.0818
chr4	57956818	57963723	protein_coding	Txn1	exon	ENSMUSG00000028367	ProperStrand	31	chr15	98350216	98350263	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-6.0531
chr17	57204852	57204892	protein_coding	Crb3	utr3	ENSMUSG00000044279	ProperStrand	11	chr5	121655077	121655126	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-7.0917
chr3	90046271	90046288	protein_coding	Creb3l4	exon	ENSMUSG00000027938	NonProperStrand	1	chr1	162965531	162965588	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-inf
chr13	97266647	97266664	protein_coding	Polk	exon	ENSMUSG00000021668	NonProperStrand	25	chr2	26252345	26252411	protein_coding	Pmpca	utr3	ENSMUSG00000026926	ProperStrand	45	1	-15.6518
chr5	121828827	121828843	protein_coding	Trafd1	exon	ENSMUSG00000042726	ProperStrand	81	chr12	85350481	85350499	protein_coding	Acot1	utr5	ENSMUSG00000072949	ProperStrand	72	1	-12.3441
chr8	122429887	122429903	SINE	B1_Mur4	Alu	chr8B1_Mur4122429833	NonProperStrand	12	chrX	160396313	160396329	protein_coding	Zrsr2	utr5	ENSMUSG00000031370	ProperStrand	57	1	-16.6442
chr7	13516164	13516207	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr13	51743604	51743703	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-2.4812
chr13	9833580	9833621	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr12	4200907	4200981	protein_coding	Adcy3	exon	ENSMUSG00000020654	ProperStrand	33	1	-6.1269
chr1	135972150	135972227	protein_coding	Btg2	utr3	ENSMUSG00000020423	ProperStrand	5	chr10	23505152	23505177	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-5.7809
chr13	107584732	107584807	protein_coding	Ipo11	utr3	ENSMUSG00000042590	ProperStrand	120	chr10	23505150	23505240	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-3.8490
chr17	31722744	31722760	protein_coding	Pknox1	intron	ENSMUSG00000006705	ProperStrand	110	chr14	25311325	25312640	protein_coding	Rps24	exon	ENSMUSG00000025290	ProperStrand	110	1	-10.8785
chr11	69555906	69555931	protein_coding	Polr2a	exon	ENSMUSG00000005198	ProperStrand	200	chr7	57041565	57041581	protein_coding	Prmt3	exon	ENSMUSG00000030505	ProperStrand	89	1	-10.1064
chr17	30772308	30772376	protein_coding	Dnahc8	exon	ENSMUSG00000033826	ProperStrand	246	chr15	79908929	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	2	-4.9103
chr16	31297623	31300503	protein_coding	Apod	exon	ENSMUSG00000022548	ProperStrand	10	chr7	116663668	116663768	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-5.9268
chr17	30749412	30749452	protein_coding	Glo1	exon	ENSMUSG00000024026	ProperStrand	75	chr19	44378050	44378077	protein_coding	Scd2	utr3	ENSMUSG00000025203	ProperStrand	219	1	-10.2683
chr16	22572859	22572876	protein_coding	Dgkg	intron	ENSMUSG00000022861	NonProperStrand	39	chr13	100195599	100195650	protein_coding	Mtap1b	utr3	ENSMUSG00000052727	ProperStrand	76	1	-13.7076
chr6	119431094	119431133	protein_coding	Fbxl14	utr3	ENSMUSG00000030019	ProperStrand	17	chr16	23111719	23111759	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.1536
chr11	88794866	88795965	antisense	4930405P13Rik	.	ENSMUSG00000087338	ProperStrand	1	chr9	59513686	59513741	protein_coding	Pkm2	exon	ENSMUSG00000032294	NonProperStrand	18	1	-inf
chr10	51865578	51865594	protein_coding	Ros1	exon	ENSMUSG00000019893	NonProperStrand	15	chr3	33713610	33713626	protein_coding	Ccdc39	exon	ENSMUSG00000027676	ProperStrand	106	2	-inf
chr11	60368922	60368955	protein_coding	Alkbh5	utr3	ENSMUSG00000042650	ProperStrand	203	chr2	158185590	158185655	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-4.1255
chr15	36723236	36723276	protein_coding	Ywhaz	utr5	ENSMUSG00000022285	ProperStrand	73	chr4	87595185	87595203	protein_coding	Mllt3	intron	ENSMUSG00000028496	NonProperStrand	10	1	-16.6214
chr1	16834199	16834289	LINE	L1_Mus1	L1	chr1L1_Mus116833035	ProperStrand	1	chr7	54442569	54442649	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-inf
chrX	67458741	67458757	LINE	Lx8	L1	chrXLx867458264	NonProperStrand	35	chr9	50816824	50816841	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	1	-12.8982
chr13	97266647	97266664	protein_coding	Polk	exon	ENSMUSG00000021668	NonProperStrand	25	chr10	127728736	127728791	protein_coding	Stat2	utr3	ENSMUSG00000040033	ProperStrand	7	1	-20.1995
chr15	100648843	100648884	protein_coding	Slc4a8	utr3	ENSMUSG00000023032	ProperStrand	15	chr15	5068446	5068478	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-8.8568
chr1	152268927	152269668	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	chr11	62418037	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-1.6099
chr3	136475784	136475800	protein_coding	Ppp3ca	intron	ENSMUSG00000028161	ProperStrand	45	chr8	73419656	73419738	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.6573
chr14	15572352	15572368	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr16	43886794	43886928	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	5	-18.9493
chr10	126621163	126621179	protein_coding	Arhgef25	exon	ENSMUSG00000019467	NonProperStrand	3	chr6	70805451	70805573	snoRNA	ENSMUSG00000065750_SNORA5	.	ENSMUSG00000065750	ProperStrand	165	3	-inf
chr11	60533656	60533714	protein_coding	Flii	exon	ENSMUSG00000002812	ProperStrand	42	chr17	13112497	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-5.2704
mmu-miR-7033-5p	2	19	miRNA	mmu-miR-7033-5p	.	mmu-miR-7033-5p	ProperStrand	25	chr7	51505822	51505891	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	2	-16.3827
chr2	168303927	168303954	protein_coding	Nfatc2	utr3	ENSMUSG00000027544	ProperStrand	13	chr3	68889111	68889201	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-6.2197
chr7	54191090	54191117	protein_coding	Uevld	intron	ENSMUSG00000043262	ProperStrand	23	chr16	23110557	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.2122
chr19	8800084	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	chr1	162966813	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	2	-2.2939
chr6	113364491	113364507	protein_coding	Ttll3	utr3	ENSMUSG00000030276	ProperStrand	17	chr5	121655100	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-6.2021
chr9	30965379	30972216	protein_coding	Aplp2	exon	ENSMUSG00000031996	ProperStrand	172	chr7	116664794	116664884	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-1.9130
chr10	86221857	86221873	protein_coding	BC030307	exon	ENSMUSG00000044937	ProperStrand	77	chr12	110923210	110923231	snoRNA	ENSMUSG00000084487_SNORD113	.	ENSMUSG00000084487	ProperStrand	183	1	-10.5746
chr18	77705773	77800522	protein_coding	Rnf165	intron	ENSMUSG00000025427	ProperStrand	15	chr2	26494708	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	5	-20.1428
chrX	50124701	50124781	LTR	ORR1D1	MaLR	chrXORR1D150124419	NonProperStrand	1	chrX	50124830	50124920	Simple_repeat	(TG)n	Simple_repeat	chrX(TG)n50124790	ProperStrand	1	1	-inf
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr15	98604924	98606960	protein_coding	Wnt10b	exon	ENSMUSG00000022996	NonProperStrand	189	1	-6.4357
chr1	155287297	155287355	snoRNA	ENSMUSG00000064435_SNORA4	.	ENSMUSG00000064435	ProperStrand	263	chr16	23111689	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	20	-19.0944
chr12	110032182	110032287	protein_coding	Yy1	exon	ENSMUSG00000021264	ProperStrand	31	chr17	24856657	24856690	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-7.7451
chr5	76019091	76019120	protein_coding	Kit	exon	ENSMUSG00000005672	ProperStrand	58	chr2	32818840	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-5.5370
chr4	32726390	32726428	protein_coding	Casp8ap2	exon	ENSMUSG00000028282	ProperStrand	7	chr7	29137235	29137424	protein_coding	Rps16	exon	ENSMUSG00000037563	ProperStrand	191	2	-inf
chr2	130109497	130109513	protein_coding	Idh3b	exon	ENSMUSG00000027406	ProperStrand	146	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-3.5257
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr11	99071587	99074445	protein_coding	Smarce1	exon	ENSMUSG00000037935	ProperStrand	38	1	-9.6347
chr5	148113281	148113297	protein_coding	Cdx2	utr3	ENSMUSG00000029646	ProperStrand	276	chr3	108357511	108357590	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-1.8329
chr9	103257849	103257872	protein_coding	Cdv3	utr3	ENSMUSG00000032803	ProperStrand	68	chr4	131908236	131908293	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-2.3940
chr2	122484287	122484304	LTR	MER21B	ERV1	chr2MER21B122484178	ProperStrand	1	mmu-miR-6240	3	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	1	-inf
chr12	110031766	110031866	protein_coding	Yy1	exon	ENSMUSG00000021264	ProperStrand	31	chr12	112779255	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-6.0689
chr2	160582967	160583017	protein_coding	Plcg1	exon	ENSMUSG00000016933	ProperStrand	65	chr4	122970397	122970487	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	4	-inf
chr6	70794802	70794819	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chrX	7752870	7752886	protein_coding	Tbc1d25	exon	ENSMUSG00000039201	ProperStrand	126	1	-9.9324
chr19	8799357	8799433	snoRNA	ENSMUSG00000065280_SNORD28	.	ENSMUSG00000065280	ProperStrand	269	chr11	69483136	69483285	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-0.9790
chr11	35622736	35622763	protein_coding	Rars	exon	ENSMUSG00000018848	ProperStrand	18	chr14	104863042	104863114	protein_coding	Pou4f1	utr3	ENSMUSG00000048349	ProperStrand	5	3	-20.1049
chr4	55431686	55431706	lincRNA	Gm12505	exon	ENSMUSG00000087070	ProperStrand	447	chr2	158182156	158182278	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-1.4714
chr9	15119287	15119433	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	chr19	8799581	8799645	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	3	-1.0030
chr2	174260807	174260859	protein_coding	Ctsz	intron	ENSMUSG00000016256	ProperStrand	13	chr19	8963032	8963048	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-13.2740
chr8	55607042	55607116	antisense	Spcs3	.	ENSMUSG00000054408	ProperStrand	30	chr16	23110966	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0481
chr17	6945369	6945774	protein_coding	Ezr	exon	ENSMUSG00000052397	ProperStrand	126	chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-6.3889
chr19	4801756	4801816	protein_coding	Rbm14	intron	ENSMUSG00000006456	ProperStrand	84	chr5	130300521	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-3.5405
chr2	33307387	33307428	protein_coding	Zbtb43	utr3	ENSMUSG00000026788	ProperStrand	4	chr2	103588240	103588355	protein_coding	Nat10	exon	ENSMUSG00000027185	NonProperStrand	64	1	-18.6464
chrX	35833676	35833693	lincRNA	Gm7598	exon	ENSMUSG00000087390	ProperStrand	12	chr1	162965531	162965594	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-10.4811
chr14	25012173	25021578	protein_coding	Dlg5	utr5	ENSMUSG00000021782	ProperStrand	46	chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	1	-9.3736
chr8	125626932	125626984	snoRNA	ENSMUSG00000064450_Snord68	.	ENSMUSG00000064450	ProperStrand	181	chr8	113366285	113366343	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	1	-6.9793
chr13	55823012	55823083	protein_coding	Txndc15	exon	ENSMUSG00000021497	ProperStrand	2	chr4	56910505	56910595	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-13.5432
chr1	71653312	71653375	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr6	142444107	142444155	protein_coding	Ldhb	exon	ENSMUSG00000030246	ProperStrand	224	1	-5.2381
chr11	120824873	120824890	protein_coding	Csnk1d	utr3	ENSMUSG00000025162	NonProperStrand	10	chr5	147646731	147646850	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	1	-11.6157
chrX	159228295	159228311	protein_coding	Txlng	utr3	ENSMUSG00000038344	NonProperStrand	5	chr10	23505152	23505255	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-5.7809
chr4	88922162	88922179	protein_coding	Cdkn2a	intron	ENSMUSG00000044303	ProperStrand	13	chr9	64023228	64023273	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	1	-11.5561
chr16	35981698	35981729	antisense	Gm15564	.	ENSMUSG00000086324	ProperStrand	6	chr19	8963087	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-14.9133
chr5	74489543	74489604	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr8	112065767	112066296	protein_coding	Pmfbp1	exon	ENSMUSG00000031727	NonProperStrand	17	1	-8.1460
chr2	25204883	25205001	protein_coding	Man1b1	exon	ENSMUSG00000036646	ProperStrand	57	chr11	97642952	97643033	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-6.7425
chr4	122677710	122677794	protein_coding	Mycl1	utr3	ENSMUSG00000028654	ProperStrand	6	chr11	6428143	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-7.7732
chr3	107692643	107692733	lincRNA	4933431E20Rik	exon	ENSMUSG00000086968	ProperStrand	2	chr4	131908357	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-8.3123
chr8	73109692	73109756	protein_coding	Ell	exon	ENSMUSG00000070002	ProperStrand	32	chr11	69481384	69481474	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-4.3754
chr7	6141451	6141528	protein_coding	Zfp444	exon	ENSMUSG00000044876	ProperStrand	8	chr16	23110454	23110544	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-10.4540
chr18	36961550	36961596	misc_RNA	Vault	.	ENSMUSG00000065145	ProperStrand	177	chr16	23111696	23111786	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	9	-10.0892
chr6	148870124	148870140	protein_coding	Fam60a	utr3	ENSMUSG00000039985	ProperStrand	68	chr2	91436228	91436335	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	3	-16.3143
chr5	54119629	54119719	LTR	MTE-int	MaLR	chr5MTE-int54119641	ProperStrand	1	chr5	54119414	54119504	LTR	ORR1E	MaLR	chr5ORR1E54119323	ProperStrand	1	1	-inf
chr7	56838202	56838262	protein_coding	Nav2	utr3	ENSMUSG00000052512	ProperStrand	106	chr9	15119738	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.6981
chr6	113339496	113339520	protein_coding	Arpc4	utr3	ENSMUSG00000079426	ProperStrand	10	chr7	116663660	116663760	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-5.9268
chr4	147939346	147939363	protein_coding	Exosc10	exon	ENSMUSG00000017264	ProperStrand	20	chr16	23110986	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.6223
chr5	136707644	136707661	protein_coding	Sh2b2	exon	ENSMUSG00000005057	NonProperStrand	101	chrX	34622906	34622990	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-2.2651
chr8	108402906	108402965	protein_coding	Nutf2	utr3	ENSMUSG00000008450	ProperStrand	39	chr9	120039544	120039623	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-4.1210
chr5	130223890	130223940	protein_coding	Mrps17	exon	ENSMUSG00000034211	ProperStrand	2	chr11	55296295	55296332	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-13.6189
chr5	151359772	151359802	protein_coding	Brca2	exon	ENSMUSG00000041147	ProperStrand	75	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.9113
chr6	40354722	40354822	protein_coding	E330009J07Rik	utr3	ENSMUSG00000037172	ProperStrand	6	chr3	123210854	123210923	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-6.4760
chr4	87253007	87253024	LINE	L1MB4	L1	chr4L1MB487252751	ProperStrand	1	chr9	40611209	40611263	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	1	-inf
chr8	74059721	74060305	protein_coding	Bst2	exon	ENSMUSG00000046718	ProperStrand	15	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	2	-15.5418
chr1	4362731	4362821	LINE	L1Md_F2	L1	chr1L1Md_F24362540	ProperStrand	1	chr5	35042038	35042118	protein_coding	Grk4	utr3	ENSMUSG00000052783	ProperStrand	15	1	-inf
chr11	32635307	32635325	protein_coding	Fbxw11	exon	ENSMUSG00000020271	NonProperStrand	31	chr4	41673405	41673421	protein_coding	Il11ra1	intron	ENSMUSG00000073889	ProperStrand	128	1	-13.1260
chr16	5256015	5256031	protein_coding	Fam86	utr5	ENSMUSG00000022544	ProperStrand	231	chr18	75161533	75161565	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-4.5686
chr3	134924498	134924514	protein_coding	Cenpe	exon	ENSMUSG00000045328	ProperStrand	71	chr18	73693168	73693186	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-5.1960
chr15	38866403	38866481	protein_coding	Fzd6	exon	ENSMUSG00000022297	ProperStrand	15	chr16	23111457	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.5828
chr14	34780930	34781010	protein_coding	Zfp488	utr3	ENSMUSG00000044519	NonProperStrand	39	chr2	141360929	141361019	protein_coding	Macrod2	intron	ENSMUSG00000068205	NonProperStrand	20	1	-16.3721
chr4	131908363	131908476	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr11	106362349	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-0.7212
chr5	34234244	34234262	protein_coding	Whsc1	utr5	ENSMUSG00000057406	ProperStrand	409	chr2	26494713	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	4	-2.5034
chr5	14252800	14252816	protein_coding	Sema3e	utr3	ENSMUSG00000063531	ProperStrand	125	chr17	35087940	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-3.8016
chr8	127363817	127364378	protein_coding	2810004N23Rik	exon	ENSMUSG00000031984	ProperStrand	22	chr16	23111757	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.6613
chr19	3366329	3368866	protein_coding	Cpt1a	exon	ENSMUSG00000024900	ProperStrand	48	chr13	29043776	29043792	protein_coding	Sox4	exon	ENSMUSG00000076431	ProperStrand	73	3	-inf
chr10	80674669	80675224	protein_coding	Atcay	exon	ENSMUSG00000034958	ProperStrand	94	chr6	71832628	71832685	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-4.7402
chr2	131125037	131125055	protein_coding	Rnf24	utr3	ENSMUSG00000048911	ProperStrand	11	chr3	123210885	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.2109
chr8	98252603	98253054	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	chr2	63936035	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	2	-7.6371
chr17	15869511	15869601	protein_coding	Chd1	exon	ENSMUSG00000023852	ProperStrand	82	chr9	15119643	15119723	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.1035
chr7	119934438	120042780	protein_coding	Tead1	utr3	ENSMUSG00000055320	ProperStrand	217	chr8	73419657	73419761	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	4	-4.8930
chr3	84333109	84333127	protein_coding	Arfip1	exon	ENSMUSG00000074513	NonProperStrand	56	chr14	33005039	33005089	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	2	-6.9168
chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	chr9	15118244	15118336	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	7	-7.6223
chr11	108783076	108783093	protein_coding	Axin2	utr5	ENSMUSG00000000142	NonProperStrand	81	chr4	131865867	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-2.5260
chr11	82692475	82692491	protein_coding	Rad51l3	exon	ENSMUSG00000018841	ProperStrand	112	chr12	30672022	30672063	protein_coding	Pxdn	exon	ENSMUSG00000020674	ProperStrand	33	1	-13.2669
chr7	31895791	31899711	protein_coding	Hpn	utr5	ENSMUSG00000001249	ProperStrand	126	chr5	121655099	121655137	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-4.2792
chr11	115795083	115796683	protein_coding	Sap30bp	exon	ENSMUSG00000020755	ProperStrand	15	chr3	68889086	68889143	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-5.9293
chr3	32298978	32335263	protein_coding	Pik3ca	intron	ENSMUSG00000027665	ProperStrand	23	chr19	8963027	8963155	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-9.8701
chr5	42136455	42136473	Low_complexity	GA-rich	Low_complexity	chr5GA-rich42136449	NonProperStrand	106	chr7	51808103	51809024	protein_coding	Nr1h2	utr5	ENSMUSG00000060601	ProperStrand	14	1	-15.1486
chr17	66468411	66468427	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	chr9	119148002	119148051	protein_coding	Oxsr1	utr3	ENSMUSG00000036737	ProperStrand	33	1	-11.0620
chr4	131865792	131866074	lincRNA	Snhg12	exon	ENSMUSG00000086290	ProperStrand	178	chr5	130295414	130295504	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	5	-13.8098
chr14	76247752	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	chr10	23506278	23506330	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	5	-1.1759
chr13	59567364	59567472	protein_coding	Agtpbp1	utr3	ENSMUSG00000021557	ProperStrand	35	chr3	82816757	82816774	protein_coding	Fgg	exon	ENSMUSG00000033860	NonProperStrand	321	3	-19.5923
chrX	100431242	100431322	protein_coding	4930519F16Rik	intron	ENSMUSG00000031325	NonProperStrand	1	chrX	100431554	100431644	pseudogene	Gm14847	.	ENSMUSG00000080886	ProperStrand	1	1	-inf
chr6	94776846	94776875	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	chr13	51743580	51743662	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	4	-9.9070
chr13	79853173	79853253	LINE	L1VL4	L1	chr13L1VL479851595	ProperStrand	1	chr15	6213016	6213106	LINE	L1_Mus3	L1	chr15L1_Mus36213020	ProperStrand	1	1	-inf
chr6	70098720	70098737	LTR	MTEa	MaLR	chr6MTEa70098663	ProperStrand	30	mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	1	-7.2816
chr16	20123274	20123291	protein_coding	Klhl24	utr3	ENSMUSG00000062901	ProperStrand	212	chr11	77995191	77995214	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-3.7565
chr16	92112205	92112295	protein_coding	Mrps6	utr3	ENSMUSG00000039680	ProperStrand	3	chr11	55296216	55296296	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-12.5197
chr5	135421697	135421764	protein_coding	Cldn4	utr3	ENSMUSG00000047501	ProperStrand	12	chr18	35102297	35102340	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-9.8504
chr18	33368704	33368720	protein_coding	Stard4	exon	ENSMUSG00000024378	ProperStrand	21	chr11	6428121	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.1873
chr2	151409738	151410600	protein_coding	Sdcbp2	exon	ENSMUSG00000027456	ProperStrand	1	chr16	23110539	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-inf
chr8	124128374	124128402	protein_coding	Zcchc14	exon	ENSMUSG00000061410	ProperStrand	22	chr2	66385173	66385189	protein_coding	Scn9a	exon	ENSMUSG00000075316	ProperStrand	58	1	-15.4171
chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	chr6	67222175	67222202	protein_coding	Serbp1	exon	ENSMUSG00000036371	ProperStrand	261	1	-6.3475
chr11	69492558	69493656	protein_coding	Senp3	exon	ENSMUSG00000005204	NonProperStrand	1	chr3	108357255	108357355	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-inf
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr18	35714194	35714284	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-1.1129
chr19	46339703	46339776	protein_coding	Gbf1	exon	ENSMUSG00000025224	ProperStrand	50	chr8	116260626	116260643	protein_coding	Adamts18	exon	ENSMUSG00000053399	NonProperStrand	3	1	-inf
chr14	66789345	66790533	protein_coding	Ptk2b	exon	ENSMUSG00000059456	ProperStrand	7	chr5	121655016	121655096	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-8.0440
chr13	94980628	94994900	protein_coding	Scamp1	exon	ENSMUSG00000021687	ProperStrand	9	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	2	-18.9390
chr19	6398202	6398232	protein_coding	Pygm	utr3	ENSMUSG00000032648	ProperStrand	2	chr4	134926614	134927796	protein_coding	A330049M08Rik	exon	ENSMUSG00000043924	ProperStrand	130	1	-20.1922
chr7	106630828	106630857	protein_coding	Rps3	exon	ENSMUSG00000030744	ProperStrand	159	chr15	98350167	98350257	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	3	-7.5263
chr10	75052198	75052288	protein_coding	Ggt5	utr5	ENSMUSG00000006344	NonProperStrand	1	chr10	75051791	75051881	protein_coding	Gm17269	intron	ENSMUSG00000092155	NonProperStrand	1	1	-inf
chr8	25920545	25921169	protein_coding	Adam5	exon	ENSMUSG00000031554	ProperStrand	49	chr11	6428077	6428154	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.5628
chr15	85411909	85411925	lincRNA	AU022754	intron	ENSMUSG00000087046	ProperStrand	2	chr11	100182970	100183115	protein_coding	Eif1	utr3	ENSMUSG00000035530	NonProperStrand	3	2	-inf
chr19	6261807	6261824	protein_coding	Atg2a	exon	ENSMUSG00000024773	ProperStrand	97	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.4307
chr1	28097234	28097314	LINE	L1VL4	L1	chr1L1VL428097229	ProperStrand	1	chr1	28097126	28097216	LINE	L1_Mus3	L1	chr1L1_Mus328097057	ProperStrand	1	1	-inf
chr5	100396512	100396570	protein_coding	Hnrnpd	intron	ENSMUSG00000000568	ProperStrand	33	chr17	35088957	35089023	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-7.0541
chr5	13399596	13399612	protein_coding	Sema3a	utr5	ENSMUSG00000028883	NonProperStrand	10	chr17	33975159	33975223	protein_coding	Ndufa7	utr3	ENSMUSG00000041881	ProperStrand	64	1	-16.7688
chr15	82933407	82933423	antisense	Gm17206	.	ENSMUSG00000090964	ProperStrand	1	chr12	17552948	17552994	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-inf
chr14	99446571	99446629	protein_coding	6720463M24Rik	exon	ENSMUSG00000022070	ProperStrand	23	chr12	56700673	56700694	protein_coding	Insm2	exon	ENSMUSG00000045440	NonProperStrand	22	1	-17.2278
chr14	115579787	115579808	protein_coding	Gpc5	intron	ENSMUSG00000022112	NonProperStrand	14	chr11	6428076	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.9988
chr7	134381114	134381174	protein_coding	Zfp553	utr3	ENSMUSG00000045598	ProperStrand	7	chr17	39985321	39985411	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-10.3222
chr2	127062223	127062277	protein_coding	Snrnp200	exon	ENSMUSG00000003660	ProperStrand	203	chr11	4820972	4820990	protein_coding	Thoc5	intron	ENSMUSG00000034274	ProperStrand	325	1	-7.4942
chr2	130103751	130103811	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	chr15	79908928	79908954	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-1.2350
chr10	80809668	80809684	protein_coding	Hmg20b	exon	ENSMUSG00000020232	ProperStrand	157	chr9	50816824	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	1	-9.8782
chr4	131866176	131866276	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	chr1	173041632	173041649	tRNA	tRNA710-ValCAC	.	540299	ProperStrand	206	1	-1.5685
chr7	129132553	129132599	protein_coding	Gga2	utr3	ENSMUSG00000030872	ProperStrand	65	chr11	98878341	98878441	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-6.1267
chr17	46541114	46541148	misc_RNA	7SK	.	ENSMUSG00000065808	ProperStrand	16	chr15	36531154	36532637	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	2	-16.6998
chr14	64081496	64081513	protein_coding	Fam167a	utr3	ENSMUSG00000035095	ProperStrand	80	chr8	108372390	108372458	protein_coding	Cenpt	intron	ENSMUSG00000036672	ProperStrand	13	2	-inf
chr16	59555214	59555230	protein_coding	Crybg3	utr5	ENSMUSG00000022723	ProperStrand	18	chr4	21801396	21801422	protein_coding	Sfrs18	exon	ENSMUSG00000028248	ProperStrand	36	1	-16.7542
chr1	162965539	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr10	23505554	23505628	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	5	-0.7636
chr2	54965336	54965352	protein_coding	Galnt13	exon	ENSMUSG00000060988	ProperStrand	45	chr7	116663633	116663711	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.0166
chr12	88488443	88496424	protein_coding	Pomt2	exon	ENSMUSG00000034126	NonProperStrand	331	chr4	131865855	131865961	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-0.9371
chr2	32818134	32818572	protein_coding	Rpl12	exon	ENSMUSG00000038900	ProperStrand	167	chr11	69483136	69483283	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-3.0208
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr11	74718931	74718962	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	1	-2.3644
chr7	17040701	17040717	protein_coding	Tmem160	exon	ENSMUSG00000019158	ProperStrand	55	chr17	24857800	24857847	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.4438
chrX	13164082	13177489	protein_coding	Cask	exon	ENSMUSG00000031012	NonProperStrand	26	chr1	36759339	36759383	protein_coding	Actr1b	exon	ENSMUSG00000037351	ProperStrand	14	1	-18.0942
chr11	114533090	114533598	protein_coding	Rpl38	exon	ENSMUSG00000057322	ProperStrand	29	chr3	123210908	123210975	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.3336
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr7	52382808	52382832	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-2.3373
chr8	79176270	79176288	lincRNA	Gm10649	intron	ENSMUSG00000074235	ProperStrand	6	chr2	35013233	35013280	protein_coding	Cep110	exon	ENSMUSG00000057110	ProperStrand	20	1	-18.8216
chr9	96976402	96976444	protein_coding	Slc25a36	utr3	ENSMUSG00000032449	ProperStrand	159	chr11	6428035	6428085	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-4.5280
chr8	97633690	97633780	protein_coding	Kifc3	exon	ENSMUSG00000031788	ProperStrand	13	chr4	131908261	131908341	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.0703
chr2	69193631	69193669	LINE	L1Md_F2	L1	chr2L1Md_F269191897	ProperStrand	54	chr19	8963088	8963188	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.4527
chr5	39061209	39061286	protein_coding	Zfp518b	utr3	ENSMUSG00000046572	ProperStrand	95	chr9	120038613	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.2445
chr8	69186000	69186018	LTR	MTD	MaLR	chr8MTD69185724	NonProperStrand	1	chr5	35622272	35622289	protein_coding	Adra2c	utr5	ENSMUSG00000045318	ProperStrand	8	1	-inf
chr7	20287969	20287990	protein_coding	Tomm40	intron	ENSMUSG00000002984	ProperStrand	57	chr15	85065726	85065744	protein_coding	Fbln1	intron	ENSMUSG00000006369	ProperStrand	32	1	-14.6790
chr16	23110454	23110507	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	NonProperStrand	16	chr16	23110907	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	NonProperStrand	93	1	-15.1243
chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	chr5	54389949	54389965	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	1	-7.2391
chr7	120657374	120657390	protein_coding	Far1	utr5	ENSMUSG00000030759	ProperStrand	72	chr4	131908710	131908749	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.9862
chr10	60806404	60806504	protein_coding	X99384	exon	ENSMUSG00000020092	ProperStrand	60	chr16	23110472	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.4617
chr12	114375179	114375212	protein_coding	Mta1	utr3	ENSMUSG00000021144	ProperStrand	74	chr16	23111406	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.9842
chr10	122217001	122294252	protein_coding	Ppm1h	intron	ENSMUSG00000034613	ProperStrand	51	chr16	23110827	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.0517
chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	chr15	5068425	5068470	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-3.1871
chr1	70572981	70573000	protein_coding	Spag16	intron	ENSMUSG00000053153	NonProperStrand	34	chr5	108334195	108334260	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-5.9306
chr8	46038056	46038146	protein_coding	Fat1	exon	ENSMUSG00000070047	ProperStrand	306	chr9	15119295	15119375	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-2.1419
chr2	130101996	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	chr17	26360455	26360535	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	1	-2.3377
chr3	95480876	95480892	protein_coding	Adamtsl4	exon	ENSMUSG00000015850	NonProperStrand	4	chr11	6428097	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	NonProperStrand	91	1	-18.0090
chr4	143748332	143749010	protein_coding	Oog3	exon	ENSMUSG00000050810	NonProperStrand	78	chr9	64022855	64022910	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-7.5019
chr11	43333661	43333678	LINE	L2	L2	chr11L243333574	NonProperStrand	1	chr19	8800352	8800442	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-inf
chr3	30997085	30997156	protein_coding	Skil	exon	ENSMUSG00000027660	ProperStrand	23	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	3	-17.3696
chr14	99698181	99698209	protein_coding	Klf5	utr5	ENSMUSG00000005148	ProperStrand	39	chr8	11514116	11514132	protein_coding	Cars2	exon	ENSMUSG00000056228	ProperStrand	17	1	-16.7184
chr19	40194235	40194275	LINE	Lx2	L1	chr19Lx240189486	ProperStrand	24	chr4	131908356	131908439	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-7.6045
chr9	21544158	21544219	protein_coding	Ldlr	exon	ENSMUSG00000032193	ProperStrand	60	chrX	152009278	152009294	protein_coding	Ptchd1	exon	ENSMUSG00000041552	NonProperStrand	294	1	-10.1282
chr7	19590197	19590213	protein_coding	Irf2bp1	exon	ENSMUSG00000044030	NonProperStrand	81	chr2	26494762	26494802	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.5783
chr5	119207105	119207205	protein_coding	Med13l	exon	ENSMUSG00000018076	ProperStrand	226	chr9	95524996	95525035	snoRNA	ENSMUSG00000065346_SNORA4	.	ENSMUSG00000065346	ProperStrand	142	1	-8.9276
chr1	133252344	133252385	protein_coding	Srgap2	intron	ENSMUSG00000026425	ProperStrand	299	chr9	78327863	78327953	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-3.2688
chr4	137213839	137213914	protein_coding	Usp48	utr3	ENSMUSG00000043411	ProperStrand	135	chr11	48615535	48615609	snoRNA	ENSMUSG00000064725_Snord96a	.	ENSMUSG00000064725	ProperStrand	89	1	-10.8930
chr13	98259984	98260003	lincRNA	Gm11019	intron	ENSMUSG00000078952	ProperStrand	113	chr19	6317288	6317469	protein_coding	Cdc42bpg	exon	ENSMUSG00000024769	ProperStrand	90	1	-11.2272
chr2	179933311	179933497	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr7	118219704	118219728	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-1.1470
chr2	172270204	172270220	protein_coding	2410001C21Rik	exon	ENSMUSG00000027502	NonProperStrand	54	chr6	88468707	88468753	protein_coding	Sec61a1	utr5	ENSMUSG00000030082	ProperStrand	46	1	-14.0630
chr11	70208043	70210603	protein_coding	Pelp1	exon	ENSMUSG00000018921	ProperStrand	64	chr4	131908236	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-2.5339
chr4	43526330	43526362	protein_coding	Car9	utr3	ENSMUSG00000028463	NonProperStrand	35	chr11	97639686	97642683	protein_coding	Rpl23	exon	ENSMUSG00000071415	ProperStrand	920	2	-14.1986
chr11	60533595	60533685	protein_coding	Flii	exon	ENSMUSG00000002812	ProperStrand	42	chr17	27700106	27700186	protein_coding	Hmga1	utr3	ENSMUSG00000046711	ProperStrand	180	1	-11.8292
chr19	23318596	23329222	protein_coding	Smc5	exon	ENSMUSG00000024943	ProperStrand	146	chr8	32260335	32260385	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-2.9797
chr11	83109297	83109395	protein_coding	Pex12	utr3	ENSMUSG00000018733	ProperStrand	3	chr11	113762910	113762926	protein_coding	Sdk2	intron	ENSMUSG00000041592	NonProperStrand	98	2	-inf
chr11	77996560	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	chr17	35089181	35089230	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	6	-2.6694
chr8	72834355	72835549	protein_coding	Cope	exon	ENSMUSG00000055681	ProperStrand	11	chr16	23110968	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.6241
chr1	24621420	24621443	protein_coding	Gm10925	intron	ENSMUSG00000090378	ProperStrand	320	chr11	6520321	6520425	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	1	-4.4427
chr1	63319950	63319966	protein_coding	Zdbf2	utr5	ENSMUSG00000027520	NonProperStrand	20	chr7	29136537	29136560	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.3737
chr4	149090945	149100225	protein_coding	Tmem201	utr3	ENSMUSG00000044700	ProperStrand	60	chr16	23111695	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	5	-9.6562
chr11	113523870	113523887	protein_coding	Cog1	utr3	ENSMUSG00000018661	ProperStrand	51	chr7	116664827	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-7.3297
chr18	63170252	63170268	protein_coding	Fam38b	utr3	ENSMUSG00000041482	NonProperStrand	50	chr19	8963027	8963094	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.5849
chr1	190267301	190267317	protein_coding	Ush2a	exon	ENSMUSG00000026609	NonProperStrand	60	chr4	116827120	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-7.0403
chr8	77742558	77742574	protein_coding	Rasd2	exon	ENSMUSG00000034472	NonProperStrand	237	chr4	130305550	130305618	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	1	-7.1694
chr8	93842500	93842572	protein_coding	Fto	intron	ENSMUSG00000055932	ProperStrand	34	chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	1	-10.9777
chr4	151701661	151701689	protein_coding	Rpl22	exon	ENSMUSG00000028936	ProperStrand	112	chr11	69483136	69483192	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-2.7443
chr5	34976472	34976562	protein_coding	Mfsd10	utr3	ENSMUSG00000001082	ProperStrand	38	chr7	29136525	29136575	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	9	-23.5977
chr4	24513237	24513327	protein_coding	Mms22l	intron	ENSMUSG00000045751	ProperStrand	21	chr12	17552944	17553029	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-7.1708
chr17	24857717	24857807	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	chr16	18240850	18240925	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	4	-0.8266
chr5	100463992	100465127	protein_coding	Hnrpdl	utr3	ENSMUSG00000029328	ProperStrand	39	chr1	162965981	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-7.3729
chr8	87564255	87564284	protein_coding	Tnpo2	intron	ENSMUSG00000031691	ProperStrand	92	chr16	23109050	23109092	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-6.4344
chr17	32280521	32280603	protein_coding	Notch3	exon	ENSMUSG00000038146	ProperStrand	181	chr7	52118464	52118514	protein_coding	Ptov1	utr3	ENSMUSG00000038502	ProperStrand	26	1	-12.7924
chr5	77709971	77710024	protein_coding	Rest	exon	ENSMUSG00000029249	ProperStrand	136	chr1	3661500	3661517	protein_coding	Xkr4	utr5	ENSMUSG00000051951	ProperStrand	59	1	-11.7039
chr7	30327358	30327376	LTR	RLTR19C	ERVK	chr7RLTR19C30326980	ProperStrand	1	chr15	98350212	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-inf
chr4	135327523	135329683	protein_coding	Myom3	exon	ENSMUSG00000037139	NonProperStrand	62	chr10	23505193	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.1888
chr12	30684802	30684892	protein_coding	Pxdn	exon	ENSMUSG00000020674	ProperStrand	33	chr9	120038554	120038627	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.1461
chr13	55349075	55418821	protein_coding	Nsd1	utr3	ENSMUSG00000021488	ProperStrand	186	chr10	23505152	23505269	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	7	-3.9342
chr2	90235289	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	52958453	52958469	protein_coding	Car11	exon	ENSMUSG00000003273	NonProperStrand	250	1	-1.9243
chr5	121654542	121654558	protein_coding	Rpl6	utr5	ENSMUSG00000029614	ProperStrand	332	chr17	56397630	56397647	protein_coding	Fem1a	exon	ENSMUSG00000043683	NonProperStrand	2	1	-17.4136
chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	chr17	34089396	34089476	protein_coding	Rps18	exon	ENSMUSG00000008668	ProperStrand	111	1	-8.0397
chr1	155287323	155287354	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	chr13	51743566	51743661	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	2	-4.7840
chr9	83678802	83681881	protein_coding	Elovl4	exon	ENSMUSG00000032262	ProperStrand	159	chr18	35716696	35716786	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-0.7894
chr3	96218559	96218622	misc_RNA	Telomerase-vert	.	ENSMUSG00000064796	ProperStrand	443	chr19	44079677	44079693	protein_coding	Cyp2c44	utr3	ENSMUSG00000025197	NonProperStrand	21	1	-11.4358
chr14	31378745	31378809	protein_coding	Tkt	exon	ENSMUSG00000021957	ProperStrand	160	chr4	57727889	57727906	protein_coding	Gm20459	intron	ENSMUSG00000089945	NonProperStrand	34	1	-12.4921
chr19	44188398	44188478	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	NonProperStrand	9	chr19	44188508	44188598	snoRNA	ENSMUSG00000077391_SNORA12	.	ENSMUSG00000077391	NonProperStrand	2	2	-inf
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr18	68038299	68040405	protein_coding	Cep192	exon	ENSMUSG00000024542	NonProperStrand	16	1	-10.4721
chr17	75790277	75790293	protein_coding	Ltbp1	utr3	ENSMUSG00000001870	NonProperStrand	66	chr11	84722945	84722961	protein_coding	Myo19	exon	ENSMUSG00000020527	ProperStrand	82	1	-12.4947
chrX	62669067	62669157	LINE	Lx4A	L1	chrXLx4A62667606	ProperStrand	1	chr14	12827159	12827239	protein_coding	Ptprg	intron	ENSMUSG00000021745	ProperStrand	72	1	-inf
chr10	7383389	7383405	protein_coding	Pcmt1	utr5	ENSMUSG00000019795	ProperStrand	55	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-9.1013
chr7	129237166	129237197	protein_coding	Ndufab1	exon	ENSMUSG00000030869	ProperStrand	11	chr1	162967516	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-6.7984
chr7	52958453	52958469	protein_coding	Car11	exon	ENSMUSG00000003273	NonProperStrand	250	chr8	108410240	108410271	protein_coding	Edc4	exon	ENSMUSG00000036270	ProperStrand	34	1	-11.5984
chr18	20846163	20846216	protein_coding	B4galt6	utr3	ENSMUSG00000056124	ProperStrand	31	chr2	158182180	158182280	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	3	-14.4904
chr3	85942727	85942776	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	chr8	98269991	98270082	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-2.2377
chr5	118517453	118517485	protein_coding	Fbxw8	utr3	ENSMUSG00000032867	ProperStrand	61	chr16	23110530	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	4	-8.8604
chr11	74633384	74633400	protein_coding	Mettl16	utr3	ENSMUSG00000010554	NonProperStrand	15	chr19	8963027	8963104	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.8348
chr15	12835359	12835439	protein_coding	Drosha	exon	ENSMUSG00000022191	ProperStrand	163	chr12	106269284	106269374	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-2.3434
chr4	137030185	137030268	protein_coding	Hspg2	intron	ENSMUSG00000028763	ProperStrand	812	chr8	72287172	72287188	protein_coding	Zfp866	utr3	ENSMUSG00000043090	NonProperStrand	134	1	-6.5086
chr10	20080837	20080859	protein_coding	Fam54a	utr3	ENSMUSG00000019992	ProperStrand	232	chr11	96635806	96638294	protein_coding	Snx11	utr5	ENSMUSG00000020876	NonProperStrand	24	1	-12.4562
chr12	60575476	60575494	LINE	L1_Mus4	L1	chr12L1_Mus460575423	ProperStrand	33	chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	1	-8.9961
chr12	104663677	104663695	protein_coding	Ddx24	intron	ENSMUSG00000041645	NonProperStrand	23	chr7	116664806	116664852	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-7.2385
chr5	140408327	140408344	protein_coding	Elfn1	intron	ENSMUSG00000048988	ProperStrand	12	chr8	73037933	73037950	protein_coding	2810422J05Rik	exon	ENSMUSG00000055553	ProperStrand	171	1	-14.4918
chr6	94530593	94530639	protein_coding	Slc25a26	intron	ENSMUSG00000045100	ProperStrand	3	chr9	120038576	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-9.2011
chr11	113730275	113731050	protein_coding	Sdk2	exon	ENSMUSG00000041592	NonProperStrand	98	chr9	120037908	120037969	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	2	-6.3761
chr7	52377883	52377912	protein_coding	Rps11	exon	ENSMUSG00000003429	ProperStrand	49	chr17	24857717	24857844	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.6426
chr14	27199812	27199828	antisense	4933413J09Rik	.	ENSMUSG00000021874	ProperStrand	51	chr9	20696080	20696130	protein_coding	Ppan	exon	ENSMUSG00000004100	ProperStrand	65	1	-13.4827
chrX	96262290	96262933	protein_coding	Stard8	exon	ENSMUSG00000031216	ProperStrand	142	chr12	74213356	74213459	protein_coding	Six4	exon	ENSMUSG00000034460	ProperStrand	33	1	-12.7928
chr12	3968611	3968627	protein_coding	Efr3b	exon	ENSMUSG00000020658	ProperStrand	142	chr9	120038466	120038551	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.6088
chr1	71699454	71699554	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr2	121239789	121239849	protein_coding	Pdia3	exon	ENSMUSG00000027248	ProperStrand	74	1	-7.4149
chr2	90235286	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr13	75905620	75905650	protein_coding	Ell2	intron	ENSMUSG00000001542	ProperStrand	110	2	-5.6895
mmu-miR-5121	1	21	miRNA	mmu-miR-5121	.	mmu-miR-5121	ProperStrand	4	chr19	8963027	8963094	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-7.6308
chr13	22121129	22121178	lincRNA	Gm11292	intron	ENSMUSG00000043145	ProperStrand	6	chr7	148195605	148195622	protein_coding	Ifitm3	utr3	ENSMUSG00000025492	NonProperStrand	20	2	-19.0755
chr9	30235085	30235101	protein_coding	Snx19	exon	ENSMUSG00000031993	ProperStrand	353	chr17	35299512	35299562	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-1.6465
chr13	49300561	49300656	protein_coding	1110007C09Rik	utr5	ENSMUSG00000037960	ProperStrand	5	chr19	8799053	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-10.9603
chr8	46593769	46593785	protein_coding	Sorbs2	intron	ENSMUSG00000031626	ProperStrand	50	chr4	132623380	132623480	protein_coding	Ahdc1	intron	ENSMUSG00000037692	ProperStrand	100	1	-12.6552
chr9	20944011	20944047	protein_coding	Cdc37	utr3	ENSMUSG00000019471	ProperStrand	97	chr1	92689614	92689630	protein_coding	Col6a3	exon	ENSMUSG00000048126	ProperStrand	79	1	-11.7954
chr5	23928893	23928909	protein_coding	Cdk5	intron	ENSMUSG00000028969	NonProperStrand	11	chr4	131865855	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.8470
chr14	68341346	68341393	protein_coding	Kctd9	intron	ENSMUSG00000034327	ProperStrand	38	chr9	63868722	63868738	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	2	-15.0518
chr19	9949326	9949588	protein_coding	Incenp	exon	ENSMUSG00000024660	ProperStrand	111	chr2	75503460	75503550	protein_coding	Hnrnpa3	utr3	ENSMUSG00000059005	ProperStrand	289	1	-8.9293
chr6	39312690	39312737	protein_coding	Slc37a3	intron	ENSMUSG00000029924	ProperStrand	24	chr11	97642952	97643026	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	4	-13.5832
chr4	34412806	34412827	Low_complexity	C-rich	Low_complexity	chr4C-rich34412453	NonProperStrand	1	chr14	33005095	33005207	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-inf
chr1	89751013	89752654	protein_coding	Dgkd	intron	ENSMUSG00000070738	ProperStrand	39	chr18	35716787	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	7	-18.9017
chr9	59525912	59526012	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr15	98860801	98864547	protein_coding	Tuba1c	utr5	ENSMUSG00000043091	ProperStrand	28	7	-19.4478
chr1	66741087	66741103	protein_coding	Unc80	exon	ENSMUSG00000055567	NonProperStrand	212	chr9	120038530	120038551	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.0521
chr8	87525135	87525238	protein_coding	Hook2	exon	ENSMUSG00000052566	ProperStrand	204	chr7	52382237	52382314	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-5.8604
chr10	61898531	61900224	protein_coding	Supv3l1	exon	ENSMUSG00000020079	ProperStrand	14	chr12	103633991	103636419	protein_coding	Lgmn	exon	ENSMUSG00000021190	ProperStrand	18	3	-inf
chr14	55513091	55513113	protein_coding	Pabpn1	exon	ENSMUSG00000022194	ProperStrand	22	chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	1	-11.0948
chr3	87736093	87736152	protein_coding	Isg20l2	exon	ENSMUSG00000048039	ProperStrand	10	chr13	21872395	21872485	protein_coding	Hist1h1b	utr5	ENSMUSG00000058773	ProperStrand	65	2	-inf
chr11	115792000	115792016	protein_coding	Recql5	exon	ENSMUSG00000020752	NonProperStrand	6	chr1	120575752	120575815	protein_coding	Tfcp2l1	utr3	ENSMUSG00000026380	ProperStrand	158	2	-19.0532
chr9	56370745	56370835	LINE	L1ME2	L1	chr9L1ME256370678	NonProperStrand	1	chr9	56370960	56371050	SINE	B1_Mus1	Alu	chr9B1_Mus156370913	ProperStrand	1	1	-inf
chr10	107026614	107026636	protein_coding	Ptprq	intron	ENSMUSG00000035916	ProperStrand	1	chr14	33005095	33005138	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-inf
chr4	116826699	116826766	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	chr6	97112810	97112875	snoRNA	ENSMUSG00000065728_SNORA36	.	ENSMUSG00000065728	ProperStrand	158	1	-4.8872
chr11	79404944	79404968	protein_coding	Rab11fip4	intron	ENSMUSG00000017639	ProperStrand	30	chr5	135421888	135421926	protein_coding	Cldn4	utr3	ENSMUSG00000047501	ProperStrand	12	1	-18.0788
chr18	66143865	66147415	protein_coding	Lman1	exon	ENSMUSG00000041891	ProperStrand	36	chr11	69483136	69483190	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.3562
chr2	152708062	152709963	protein_coding	Tpx2	exon	ENSMUSG00000027469	ProperStrand	111	chr11	97642954	97643034	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.4919
chr16	11144215	11144305	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr6	71832584	71832674	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	NonProperStrand	5	1	-15.6214
chr7	149170855	149171340	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	chr4	56910496	56910628	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-4.1184
chr2	167836657	167836674	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-5.7655
chr9	77824591	77824679	protein_coding	Elovl5	exon	ENSMUSG00000032349	ProperStrand	32	chr6	117795659	117795676	protein_coding	Zfp637	exon	ENSMUSG00000059689	NonProperStrand	53	1	-14.8352
chr14	15570705	15570785	protein_coding	Slc4a7	utr5	ENSMUSG00000021733	ProperStrand	24	chr8	129468800	129468877	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-6.2064
chr13	97949144	97949162	protein_coding	Gfm2	utr3	ENSMUSG00000021666	ProperStrand	26	chr4	115604948	115604967	protein_coding	Dmbx1	intron	ENSMUSG00000028707	ProperStrand	1	1	-inf
chr8	13416895	13416912	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr17	34171140	34172608	protein_coding	Rxrb	exon	ENSMUSG00000039656	ProperStrand	34	1	-7.5866
chr14	119371956	119372034	protein_coding	Dnajc3	exon	ENSMUSG00000022136	ProperStrand	10	chr11	116938557	116938647	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-9.7942
chr18	12172461	12172477	protein_coding	6030446N20Rik	intron	ENSMUSG00000049411	ProperStrand	235	chr11	62416950	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	2	-5.8454
chr5	33361976	33361995	protein_coding	Ywhah	exon	ENSMUSG00000018965	NonProperStrand	2	chr8	72323946	72323989	protein_coding	Atp13a1	exon	ENSMUSG00000031862	ProperStrand	75	1	-inf
chr4	43526328	43526362	protein_coding	Car9	utr3	ENSMUSG00000028463	NonProperStrand	35	chr1	24619348	24619406	protein_coding	Gm10222	exon	ENSMUSG00000067736	NonProperStrand	11	2	-19.7153
chr8	73223111	73223150	protein_coding	Jund	exon	ENSMUSG00000071076	ProperStrand	50	chr8	73419657	73419774	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.4624
chr12	88778643	88778723	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	chr13	49779715	49779805	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-0.9628
chr19	10698075	10699250	protein_coding	Ddb1	exon	ENSMUSG00000024740	ProperStrand	304	chr10	90581059	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-1.9008
chr10	80644707	80644773	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr11	68768015	68768031	protein_coding	Arhgef15	exon	ENSMUSG00000052921	NonProperStrand	21	1	-8.2008
chr8	13879426	13879506	protein_coding	Zfp828	exon	ENSMUSG00000047710	ProperStrand	32	chr4	131865863	131865894	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-4.9294
chr8	32270240	32270270	protein_coding	Mak16	utr3	ENSMUSG00000031578	ProperStrand	26	chr15	79908939	79908997	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-7.1317
chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr1	162966192	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	12	-5.5954
chr13	9833549	9833670	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr8	107849706	107849724	protein_coding	Lrrc29	intron	ENSMUSG00000041679	NonProperStrand	2	1	-12.3538
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr4	116826700	116826752	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	2	-3.1378
chr7	125310678	125310699	protein_coding	Smg1	exon	ENSMUSG00000030655	ProperStrand	70	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-3.3094
chr6	29515231	29515722	protein_coding	Tnpo3	exon	ENSMUSG00000012535	ProperStrand	58	chr2	168056581	168056661	protein_coding	Mocs3	exon	ENSMUSG00000074576	ProperStrand	3	1	-inf
chr12	83473363	83473420	protein_coding	Sipa1l1	exon	ENSMUSG00000042700	ProperStrand	84	chr5	130300518	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-3.5405
chr14	8923162	8923252	protein_coding	Rpp14	utr3	ENSMUSG00000023156	ProperStrand	1	chr10	90581059	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-inf
chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	chr9	44314837	44314926	protein_coding	Bcl9l	exon	ENSMUSG00000063382	ProperStrand	12	1	-13.0411
chr10	7383389	7383405	protein_coding	Pcmt1	utr5	ENSMUSG00000019795	ProperStrand	55	chr9	50816824	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	1	-11.9834
chr15	76427411	76427480	protein_coding	Cpsf1	exon	ENSMUSG00000034022	ProperStrand	127	chr1	72895736	72895836	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	1	-7.9846
chr15	77597977	77597993	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr1	162968441	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-1.9445
chr8	3437091	3439555	protein_coding	Arhgef18	exon	ENSMUSG00000004568	ProperStrand	26	chr11	68603801	68603820	protein_coding	Myh10	intron	ENSMUSG00000020900	ProperStrand	91	1	-14.1716
chr3	82947888	82947906	SINE	MIRb	MIR	chr3MIRb82947752	ProperStrand	2	chr18	35714144	35714205	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-inf
chr19	38869531	38869547	protein_coding	Noc3l	exon	ENSMUSG00000024999	NonProperStrand	149	chr16	23111757	23111816	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-1.4233
chr6	54379743	54379760	lincRNA	9130019P16Rik	exon	ENSMUSG00000073067	ProperStrand	255	chr9	15118273	15118322	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-1.1196
chr15	102493419	102493493	protein_coding	Atp5g2	utr3	ENSMUSG00000062683	ProperStrand	32	chr1	89681244	89681334	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-6.6831
chr7	13001150	13001166	protein_coding	Zfp551	exon	ENSMUSG00000034071	ProperStrand	1	chr1	162968218	162968287	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-inf
mmu-miR-7118-5p	3	18	miRNA	mmu-miR-7118-5p	.	mmu-miR-7118-5p	ProperStrand	1	chr6	115758042	115758119	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-inf
chr15	63801019	63801110	protein_coding	Fam49b	intron	ENSMUSG00000022378	ProperStrand	33	chr7	117189944	117190024	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.4547
chr17	25725468	25725486	protein_coding-noncoding	Lmf1	utr5	ENSMUSG00000002279	ProperStrand	1	chr2	119629139	119631358	protein_coding	Tyro3	exon	ENSMUSG00000027298	NonProperStrand	2	1	-inf
chr7	29171541	29171558	protein_coding	Med29	utr3	ENSMUSG00000003444	NonProperStrand	134	chr12	17552964	17553064	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	2	-6.0503
chr10	75956200	75959164	protein_coding	Mcm3ap	exon	ENSMUSG00000001150	ProperStrand	95	chr2	144091716	144091788	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	ProperStrand	549	1	-7.9639
chr7	118226447	118226479	protein_coding	Eif4g2	utr5	ENSMUSG00000005610	ProperStrand	134	chr11	63885336	63887052	protein_coding	Cox10	exon	ENSMUSG00000042148	NonProperStrand	187	1	-9.4214
chr17	86400792	86400811	protein_coding	Srbd1	utr5	ENSMUSG00000024135	NonProperStrand	12	chr16	23111694	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-11.7745
chr11	94158302	94158329	protein_coding	Luc7l3	exon	ENSMUSG00000020863	ProperStrand	38	chr18	35714186	35714260	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.2993
chr17	26360455	26360545	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	chr17	35088971	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	6	-15.3499
chr2	146125209	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	chr6	94776857	94776875	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	1	-6.8692
chr10	30338037	30338054	protein_coding	Hint3	exon	ENSMUSG00000019791	ProperStrand	10	chr5	122222759	122222775	protein_coding	Atxn2	utr5	ENSMUSG00000042605	ProperStrand	83	1	-16.3338
chr5	138610162	138610402	protein_coding	Mcm7	exon	ENSMUSG00000029730	ProperStrand	258	chr18	33954816	33954896	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-1.1321
chr17	35088941	35089016	processed_transcript	1110038B12Rik	.	ENSMUSG00000092203	ProperStrand	126	chr17	13112529	13112576	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-3.1962
chr19	9043972	9052526	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	chr1	162967504	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	6	-5.7791
chr19	9948847	9949392	protein_coding	Incenp	exon	ENSMUSG00000024660	ProperStrand	111	chr11	77995191	77995240	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-4.9818
chr9	64023008	64023086	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	chr4	140133053	140134163	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	1	-7.0492
chr10	62273323	62273349	protein_coding	Tet1	utr3	ENSMUSG00000047146	ProperStrand	286	chr18	75161568	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-4.1644
chr17	32453268	32453285	protein_coding	Akap8	exon	ENSMUSG00000024045	ProperStrand	339	chr11	4382186	4382268	protein_coding	Mtmr3	utr3	ENSMUSG00000034354	ProperStrand	25	3	-inf
chr6	122677932	122678032	protein_coding	Slc2a3	utr3	ENSMUSG00000003153	ProperStrand	682	chr18	73693165	73693184	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-1.2570
chr11	72989850	72989871	protein_coding	Tmem93	utr3	ENSMUSG00000047260	ProperStrand	32	chr2	120565481	120565581	protein_coding	Ttbk2	exon	ENSMUSG00000090100	ProperStrand	50	30	-19.4302
chr17	47943489	47943507	LTR	MLT1J	MaLR	chr17MLT1J47943258	ProperStrand	8	chr8	111721434	111721484	lincRNA	D030068K23Rik	intron	ENSMUSG00000085859	ProperStrand	21	1	-18.3903
chr8	98393517	98394697	protein_coding	Got2	exon	ENSMUSG00000031672	ProperStrand	85	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.7161
chr13	55655669	55655759	protein_coding	Fam193b	exon	ENSMUSG00000021495	ProperStrand	51	chr17	24857769	24857851	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	24	-19.7099
chr6	115576399	115576735	protein_coding	Raf1	exon	ENSMUSG00000000441	ProperStrand	30	chr17	24857762	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.5270
chr10	90612289	90612324	protein_coding	Tmpo	exon	ENSMUSG00000019961	ProperStrand	57	chr2	11510575	11510652	protein_coding	Rbm17	exon	ENSMUSG00000037197	ProperStrand	50	5	-18.9206
chr4	107596083	107596100	protein_coding	Cpt2	utr5	ENSMUSG00000028607	NonProperStrand	106	chr7	86987140	86987160	protein_coding	Anpep	utr5	ENSMUSG00000039062	ProperStrand	9	1	-16.0618
chr3	52388277	52388294	SINE	B4A	B4	chr3B4A52388218	ProperStrand	169	chr10	79520174	79520207	protein_coding	Sbno2	exon	ENSMUSG00000035673	ProperStrand	23	1	-13.1765
chr11	32635307	32635325	protein_coding	Fbxw11	exon	ENSMUSG00000020271	NonProperStrand	31	chr7	116664862	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.7407
chr1	74622408	74622424	protein_coding	Zfp142	exon	ENSMUSG00000026135	ProperStrand	22	chr5	144181951	144182028	protein_coding	Kdelr2	utr3	ENSMUSG00000079111	ProperStrand	25	1	-16.9885
chr8	72287172	72287188	protein_coding	Zfp866	utr3	ENSMUSG00000043090	NonProperStrand	134	chr18	35716832	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-0.9918
chr9	78023145	78023164	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr13	55257948	55257964	protein_coding	Fgfr4	exon	ENSMUSG00000005320	NonProperStrand	5	1	-11.0065
chr17	8735100	8735117	protein_coding	Pde10a	intron	ENSMUSG00000023868	NonProperStrand	78	chr1	162966812	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-5.7429
chr1	89652859	89652875	protein_coding	Atg16l1	exon	ENSMUSG00000026289	ProperStrand	41	chr14	33005064	33005138	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-4.7199
chr4	120726869	120726886	protein_coding	Col9a2	exon	ENSMUSG00000028626	ProperStrand	35	chr2	22445076	22445107	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-8.8585
chrX	135510687	135510704	protein_coding	Nrk	exon	ENSMUSG00000052854	ProperStrand	24	chr14	76247712	76247750	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-5.9558
chr12	84878751	84878975	protein_coding	Dcaf4	exon	ENSMUSG00000021222	ProperStrand	17	chr16	23110984	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-3.4874
chrX	71268736	71268752	protein_coding	Irak1	exon	ENSMUSG00000031392	NonProperStrand	18	chr16	23110455	23110477	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.6884
chr1	163510065	163510082	SINE	B4A	B4	chr1B4A163510032	NonProperStrand	3	chr2	25089427	25089445	protein_coding	Slc34a3	intron	ENSMUSG00000006469	NonProperStrand	1	1	-inf
chr17	45705375	45705478	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr2	153093472	153093511	protein_coding	Pofut1	utr3	ENSMUSG00000046020	ProperStrand	17	2	-14.7568
chr5	146314699	146314789	LTR	IAPEY3-int	ERVK	chr5IAPEY3-int146313553	NonProperStrand	1	chr5	146500610	146500700	LTR	IAPEY3-int	ERVK	chr5IAPEY3-int146500000	NonProperStrand	1	1	-inf
chr3	108228259	108228275	protein_coding	Sars	utr3	ENSMUSG00000068739	NonProperStrand	200	chr2	37255593	37255619	snoRNA	ENSMUSG00000077756_Snord90	.	ENSMUSG00000077756	ProperStrand	167	1	-8.8476
chr10	90494435	90499659	protein_coding	Apaf1	exon	ENSMUSG00000019979	ProperStrand	27	chr16	87419195	87419296	snoRNA	ENSMUSG00000065647_SNORA2	.	ENSMUSG00000065647	ProperStrand	123	3	-20.3507
chr17	85116042	85122103	protein_coding	Lrpprc	exon	ENSMUSG00000024120	ProperStrand	98	chr11	120247094	120250686	protein_coding	Nploc4	exon	ENSMUSG00000039703	ProperStrand	44	1	-12.9532
chr7	4980602	4980680	protein_coding	Zfp865	utr5	ENSMUSG00000074405	ProperStrand	15	chr11	69481365	69481455	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.8683
chr7	119785308	119785328	lincRNA	2310014F06Rik	intron	ENSMUSG00000085945	NonProperStrand	25	chr19	21930248	21930692	protein_coding	Tmem2	exon	ENSMUSG00000024754	ProperStrand	133	1	-13.4880
chr11	116535921	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr3	87743040	87743098	protein_coding	Isg20l2	intron	ENSMUSG00000048039	ProperStrand	10	2	-15.2253
chr2	141899260	141899278	protein_coding	Macrod2	intron	ENSMUSG00000068205	NonProperStrand	20	chr11	77996576	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-8.2930
chr14	32321943	32322017	protein_coding	Eaf1	utr3	ENSMUSG00000021890	ProperStrand	10	chr4	131865856	131865946	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.0395
chr9	96982040	96982130	protein_coding	Slc25a36	intron	ENSMUSG00000032449	ProperStrand	159	chr9	120039543	120039623	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.6727
chr2	26768048	26768118	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-1.0009
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr8	86133805	86133836	protein_coding	Dnajb1	exon	ENSMUSG00000005483	ProperStrand	5	2	-16.1772
chr17	47730577	47730636	protein_coding	Ccnd3	utr5	ENSMUSG00000034165	ProperStrand	58	chr8	73419657	73419757	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.1915
chr18	59417922	59417940	protein_coding	Chsy3	intron	ENSMUSG00000058152	ProperStrand	35	chr11	106362303	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-6.9108
chr11	120208392	120208479	protein_coding	Actg1	exon	ENSMUSG00000062825	ProperStrand	178	chr17	13112500	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-2.5877
chr7	109044954	109046253	protein_coding	3200002M19Rik	utr5	ENSMUSG00000030649	ProperStrand	22	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-7.1904
chr2	26494762	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	chr2	166888983	166889055	snoRNA	ENSMUSG00000077515_SNORD12	.	ENSMUSG00000077515	ProperStrand	191	1	-1.2395
chr8	108404142	108404232	protein_coding	Nutf2	utr3	ENSMUSG00000008450	ProperStrand	39	chr16	23110913	23110993	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.7347
chr14	118998604	118998704	protein_coding	Abcc4	exon	ENSMUSG00000032849	ProperStrand	137	chr10	110918628	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-2.0169
mmu-miR-6240	3	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr2	158185529	158185666	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	6	-4.5826
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	35190206	35190238	protein_coding	Htt	exon	ENSMUSG00000029104	ProperStrand	73	1	-4.0904
mmu-miR-2137	0	19	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	chr7	24713726	24713742	protein_coding	Vmn1r179	exon	ENSMUSG00000046924	NonProperStrand	69	1	-11.2749
chr15	4962082	4962098	protein_coding	C7	utr3	ENSMUSG00000079105	ProperStrand	63	chr11	6428060	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.1043
chr2	113688345	113688445	protein_coding	Arhgap11a	utr5	ENSMUSG00000041219	ProperStrand	47	chr1	162967508	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-3.9287
chr2	25563070	25563086	antisense	A230005M16Rik	.	ENSMUSG00000087612	ProperStrand	103	chr6	128386651	128386702	protein_coding	Fkbp4	exon	ENSMUSG00000030357	ProperStrand	114	2	-17.1922
chr8	13369578	13370561	protein_coding	Tfdp1	exon	ENSMUSG00000038482	ProperStrand	19	chr8	32260335	32260358	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-6.9002
chr12	113042710	113042781	protein_coding	Klc1	intron	ENSMUSG00000021288	ProperStrand	35	chr17	27144980	27144996	protein_coding	Ggnbp1	intron	ENSMUSG00000048731	NonProperStrand	2	1	-inf
chr9	57638397	57638419	protein_coding	Arid3b	exon	ENSMUSG00000004661	ProperStrand	39	chr6	145811153	145811171	protein_coding	Bhlhe41	utr3	ENSMUSG00000030256	NonProperStrand	3	1	-20.0818
chr1	88425755	88425804	protein_coding	Ptma	exon	ENSMUSG00000026238	ProperStrand	385	chr11	68887037	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	2	-2.0736
chr18	32046416	32047418	protein_coding	Wdr33	exon	ENSMUSG00000024400	ProperStrand	48	chr10	23505152	23505205	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.5517
chr7	29596394	29606890	protein_coding	Hnrnpl	exon	ENSMUSG00000015165	ProperStrand	150	chr4	131908274	131908399	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-0.8723
chr10	95499367	95499383	protein_coding	Eea1	utr3	ENSMUSG00000036499	ProperStrand	82	chr19	8799829	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-4.3478
chr7	86591609	86591699	protein_coding	Fanci	intron	ENSMUSG00000039187	ProperStrand	25	chr19	8963094	8963174	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.8447
chr9	15119630	15119766	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	chr2	130101970	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	42	-8.0843
chr11	69482251	69482656	protein_coding	Eif4a1	exon	ENSMUSG00000059796	ProperStrand	108	chr18	35714143	35714171	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-2.4038
chr11	102294589	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr11	68716778	68717884	protein_coding	Rpl26	exon	ENSMUSG00000060938	ProperStrand	130	3	-16.5067
chr9	15123933	15123963	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	NonProperStrand	100	chr5	149860362	149860445	protein_coding	Hmgb1	exon	ENSMUSG00000066551	ProperStrand	99	4	-inf
chr2	156923770	156923811	protein_coding	Samhd1	utr3	ENSMUSG00000027639	ProperStrand	13	chr15	34370578	34370668	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	7	-inf
chr8	98270008	98270098	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	chr2	130103749	130103810	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-1.2834
chr8	74103855	74103873	protein_coding	Slc27a1	exon	ENSMUSG00000031808	ProperStrand	9	chr7	116664797	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-6.1874
chr11	116535923	116535981	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr11	74718931	74718962	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	1	-1.9813
chr4	141248235	141248251	protein_coding	Ddi2	exon	ENSMUSG00000078515	ProperStrand	79	chr16	23111447	23111494	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.9045
chr8	113680130	113681226	protein_coding	Glg1	utr3	ENSMUSG00000003316	ProperStrand	83	chr4	131866187	131866291	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	5	-13.4785
chr4	126530806	126530859	protein_coding	AU040320	utr3	ENSMUSG00000028830	ProperStrand	14	chr9	79623974	79623991	protein_coding	Tmem30a	exon	ENSMUSG00000032328	ProperStrand	90	1	-15.4604
chr8	125985569	125985637	protein_coding	Def8	utr3	ENSMUSG00000001482	ProperStrand	19	chr2	31472304	31472354	protein_coding	Fubp3	utr3	ENSMUSG00000026843	ProperStrand	35	2	-inf
chr13	23830797	23830814	protein_coding	Hist1h1c	exon	ENSMUSG00000036181	ProperStrand	99	chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	1	-7.5933
chr15	58913206	58913296	protein_coding	Mtss1	utr5	ENSMUSG00000022353	ProperStrand	68	chr7	150717344	150717424	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-5.2627
chr7	75371204	75371305	protein_coding	Igf1r	utr3	ENSMUSG00000005533	ProperStrand	121	chr18	75528597	75528614	protein_coding	Smad7	utr5	ENSMUSG00000025880	NonProperStrand	14	1	-14.8689
chr4	131908363	131908442	lincRNA	Gm17300	exon	ENSMUSG00000091021	ProperStrand	109	chr18	33954914	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	NonProperStrand	24	1	-13.9684
chr7	123477451	123477614	protein_coding	Rps13	exon	ENSMUSG00000090862	ProperStrand	36	chr7	118219574	118219628	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-8.4974
chr12	72278857	72278947	protein_coding	2700049A03Rik	exon	ENSMUSG00000034601	ProperStrand	21	chr4	131866206	131866286	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-5.6911
chr15	82980087	82980225	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr11	68886928	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	8	-3.5784
chr19	6531460	6531478	protein_coding	Nrxn2	exon	ENSMUSG00000033768	ProperStrand	19	chr10	23505172	23505279	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.1073
chrX	7401394	7401494	protein_coding	Kcnd1	exon	ENSMUSG00000009731	ProperStrand	19	chr1	162965532	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.4761
chr19	53446172	53446262	protein_coding	Mxi1	utr3	ENSMUSG00000025025	ProperStrand	51	chr5	130300470	130300550	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.7919
chr12	111932473	111932532	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr2	22444549	22444573	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-2.9292
chr12	17553024	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr16	38158134	38158234	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	1	-1.0915
chr14	76247724	76247843	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	chr19	8799827	8799897	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	17	-2.3507
chr17	24343586	24343602	protein_coding	Ntn3	exon	ENSMUSG00000079662	ProperStrand	237	chr11	62416575	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-4.5838
chr16	22249160	22250956	protein_coding	Tra2b	exon	ENSMUSG00000022858	ProperStrand	32	chr8	98269959	98270019	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-6.7852
chr9	78023108	78023154	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr1	94533895	94533912	protein_coding	Myeov2	utr3	ENSMUSG00000073616	NonProperStrand	4	3	-21.2099
chr9	65643159	65643249	protein_coding	Zfp609	utr5	ENSMUSG00000040524	ProperStrand	87	chr7	116664817	116664897	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.9327
chr10	62021961	62022061	protein_coding	2510003E04Rik	exon	ENSMUSG00000036955	ProperStrand	8	chr16	23111465	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.8232
chr5	23825941	23825957	protein_coding	Kcnh2	exon	ENSMUSG00000038319	ProperStrand	242	chr14	31467599	31467656	protein_coding	Rft1	exon	ENSMUSG00000052395	ProperStrand	5	1	-15.6785
chr1	185857228	185857244	protein_coding	1700056E22Rik	exon	ENSMUSG00000044854	ProperStrand	173	chr2	144087382	144087463	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-4.4850
chr2	122528321	122528337	protein_coding	Slc30a4	utr5	ENSMUSG00000005802	ProperStrand	1	chr14	54879633	54879659	protein_coding	Abhd4	intron	ENSMUSG00000040997	ProperStrand	21	1	-inf
chr4	149368580	149368657	protein_coding	H6pd	exon	ENSMUSG00000028980	ProperStrand	14	chr11	6520321	6520421	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	1	-10.6697
chr5	118477951	118477967	protein_coding	Tesc	exon	ENSMUSG00000029359	ProperStrand	114	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-4.6223
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr2	25702680	25702696	protein_coding	Sohlh1	exon	ENSMUSG00000059625	ProperStrand	22	1	-10.6211
chr8	87569130	87571028	protein_coding	Tnpo2	exon	ENSMUSG00000031691	ProperStrand	92	chr17	35087897	35087946	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-4.3779
chr13	112540780	112541440	protein_coding	Map3k1	exon	ENSMUSG00000021754	ProperStrand	113	chr6	71832558	71832587	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-4.3887
chr7	95951922	95951941	LINE	L1_Mus2	L1	chr7L1_Mus295951767	ProperStrand	2	chr11	6428088	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-10.4671
chr6	115757996	115758120	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr1	39605591	39605684	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	3	-2.0866
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr2	25312429	25313191	protein_coding	Clic3	exon	ENSMUSG00000015093	ProperStrand	79	1	-8.1654
chr9	34765398	34765415	protein_coding	Kirrel3	intron	ENSMUSG00000032036	NonProperStrand	24	chr3	35725890	35725907	protein_coding	Atp11b	exon	ENSMUSG00000037400	NonProperStrand	18	1	-17.4813
chr11	45723144	45723160	protein_coding	Clint1	utr3	ENSMUSG00000006169	NonProperStrand	273	chr3	85942725	85942780	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	1	-6.7010
chr11	102294588	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr7	148634731	148634840	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	9	-10.5014
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr5	118605262	118605280	protein_coding	Fbxw8	exon	ENSMUSG00000032867	ProperStrand	61	1	-7.9413
chr15	98361564	98361654	protein_coding	2310037I24Rik	intron	ENSMUSG00000022992	ProperStrand	91	chr18	33954850	33954930	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-2.7570
chr2	90235299	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	56464462	56464479	protein_coding	Nrap	utr5	ENSMUSG00000049134	ProperStrand	32	1	-5.6851
chr3	4339065	4339117	rRNA	n-R5s194	.	ENSMUSG00000077912	ProperStrand	24	chr13	21360354	21360385	tRNA	tRNA995-GlnTTG	.	236047	ProperStrand	3	2	-inf
chr2	90235285	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	63225577	63225714	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	5	-1.2067
chr2	84211067	84211167	protein_coding	Calcrl	intron	ENSMUSG00000059588	NonProperStrand	2	chr2	26768408	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-13.0236
chr12	33231660	33231740	DNA	URR1B	MER1_type	chr12URR1B33231634	ProperStrand	1	chr12	33231857	33231947	LINE	Lx3_Mus	L1	chr12Lx3_Mus33231761	ProperStrand	1	1	-inf
chr2	178194847	178194864	protein_coding	Cdh26	exon	ENSMUSG00000039155	NonProperStrand	77	chr9	108111318	108111418	protein_coding	Dag1	exon	ENSMUSG00000039952	ProperStrand	54	1	-13.0259
chr2	181114709	181114809	protein_coding	Zgpat	exon	ENSMUSG00000027582	ProperStrand	10	chr19	8798525	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-8.8233
chr11	121090202	121090218	protein_coding	BC017643	utr5	ENSMUSG00000039294	ProperStrand	16	chr12	85350481	85350499	protein_coding	Acot1	utr5	ENSMUSG00000072949	ProperStrand	72	1	-15.6466
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chrY	610364	610380	protein_coding	Ddx3y	intron	ENSMUSG00000069045	ProperStrand	2	1	-15.2142
chr5	108332753	108332787	protein_coding	Rpl5	exon	ENSMUSG00000058558	ProperStrand	235	chr2	145076804	145209255	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-5.0388
chr14	33339581	33339685	protein_coding	Ercc6	exon	ENSMUSG00000054051	ProperStrand	19	chr12	53704846	53704892	snRNA	ENSMUSG00000064663_U6	.	ENSMUSG00000064663	ProperStrand	1	1	-inf
chr3	55987231	55987247	protein_coding	Nbea	utr5	ENSMUSG00000027799	NonProperStrand	115	chr5	74489587	74489677	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-2.6069
chr15	78920126	78920196	protein_coding	Eif3l	exon	ENSMUSG00000033047	ProperStrand	81	chr12	106269289	106269389	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	2	-6.0764
chr5	108336393	108336473	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	chr13	96100606	96100696	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	2	-1.3266
chr9	79604150	79606328	protein_coding	Cox7a2	exon	ENSMUSG00000032330	ProperStrand	10	chr16	23110889	23110919	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.7978
chr11	69477987	69478300	protein_coding	Cd68	exon	ENSMUSG00000018774	ProperStrand	12	chr1	162966821	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-9.5141
chr11	106684003	106684019	protein_coding	Smurf2	exon	ENSMUSG00000018363	ProperStrand	79	chr16	23111447	23111505	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.9045
chr2	121782228	121782274	protein_coding	Ctdspl2	utr5	ENSMUSG00000033411	ProperStrand	11	chr14	52829459	52829549	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-11.6607
chr2	90597710	90597726	protein_coding	Fnbp4	exon	ENSMUSG00000008200	ProperStrand	45	chr8	32260335	32260432	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	5	-19.4286
chr10	57942787	57942856	protein_coding	Ranbp2	exon	ENSMUSG00000003226	ProperStrand	52	chr3	123210852	123210889	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.3028
chr2	80369766	80369783	protein_coding	Nckap1	intron	ENSMUSG00000027002	ProperStrand	21	chr9	120038610	120038657	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.0221
chr11	97190086	97190186	protein_coding	Mrpl45	utr3	ENSMUSG00000018882	ProperStrand	12	chr16	23110968	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.4686
chr10	117126052	117126095	protein_coding	Mdm2	utr3	ENSMUSG00000020184	ProperStrand	17	chr8	85689747	85689763	protein_coding	Tbc1d9	utr5	ENSMUSG00000031709	ProperStrand	66	1	-15.7063
chr5	110752493	110752593	protein_coding	Pole	intron	ENSMUSG00000007080	ProperStrand	125	chr1	155287299	155287353	snoRNA	ENSMUSG00000064435_SNORA4	.	ENSMUSG00000064435	ProperStrand	263	1	-8.8799
chr2	51967781	51967871	protein_coding	Rif1	exon	ENSMUSG00000036202	ProperStrand	201	chr9	15118242	15118322	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-1.4465
chr19	41992266	41992976	protein_coding	Pgam1	utr3	ENSMUSG00000011752	ProperStrand	124	chr9	15119646	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-4.2996
chr3	88158479	88158579	protein_coding	Smg5	exon	ENSMUSG00000001415	ProperStrand	70	chr2	26768393	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-5.3007
chr14	61398407	61398423	protein_coding	C1qtnf9	exon	ENSMUSG00000071347	ProperStrand	187	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-3.6911
chr5	143874599	143874615	protein_coding	Rnf216	utr5	ENSMUSG00000045078	NonProperStrand	29	chr1	88661856	88661872	protein_coding	Dis3l2	intron	ENSMUSG00000053333	ProperStrand	20	1	-16.9402
chr9	21209659	21209689	protein_coding	Ilf3	utr3	ENSMUSG00000032178	ProperStrand	164	chr11	97642952	97643052	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-0.9657
chr14	61057536	61057554	LTR	RLTR22_Mus	ERVK	chr14RLTR22_Mus61057509	ProperStrand	6	chr10	99923613	99923629	protein_coding	Tmtc3	exon	ENSMUSG00000036676	NonProperStrand	9	1	-18.9485
chr2	90235286	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	115737251	115737267	protein_coding	Cand2	exon	ENSMUSG00000030319	ProperStrand	40	1	-5.2466
chr19	46343288	46343306	protein_coding	Gbf1	exon	ENSMUSG00000025224	ProperStrand	50	chr7	117189996	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.6682
chr10	89282305	89282321	protein_coding	Uhrf1bp1l	utr3	ENSMUSG00000019951	NonProperStrand	55	chr2	26493391	26493486	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	6	-18.6446
chr8	114180816	114180878	protein_coding	Zfp1	intron	ENSMUSG00000055835	ProperStrand	11	chr7	116664797	116664868	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-5.7738
chr13	100907463	100907513	protein_coding	Smn1	utr3	ENSMUSG00000021645	ProperStrand	22	chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	1	-10.1352
chr12	4858617	4858633	protein_coding	BC068281	exon	ENSMUSG00000051721	NonProperStrand	2	chr2	26494777	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-10.3719
chr3	23326181	23326197	LTR	RLTR9D	ERVK	chr3RLTR9D23325954	ProperStrand	21	chr16	57391744	57391795	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	1	-9.9121
chrX	163513688	163513705	SINE	ID_B1	B4	chrXID_B1163513671	ProperStrand	2	chr4	131908810	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-8.0336
chr5	137940318	137940418	protein_coding	Epo	intron	ENSMUSG00000029711	ProperStrand	27	chr16	43886850	43886928	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	1	-9.6840
chr19	5851064	5851144	protein_coding	Frmd8	utr3	ENSMUSG00000024816	ProperStrand	7	chr18	75979993	75980012	protein_coding	Zbtb7c	utr5	ENSMUSG00000044646	ProperStrand	64	1	-17.4896
chr13	112278554	112278570	protein_coding	Gpbp1	utr5	ENSMUSG00000032745	ProperStrand	85	chr16	90386835	90386853	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	1	-11.5084
chr15	79725922	79725968	protein_coding	Apobec3	exon	ENSMUSG00000009585	ProperStrand	14	chrX	58225380	58225396	pseudogene	Rpl7l1-ps1	.	ENSMUSG00000081323	ProperStrand	46	1	-16.8874
chr11	68643509	68646861	protein_coding	Ndel1	exon	ENSMUSG00000018736	ProperStrand	30	chr12	55797778	55797871	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	1	-9.0906
chr9	118835822	118835844	protein_coding	Ctdspl	utr5	ENSMUSG00000047409	ProperStrand	8	chr11	69483187	69483277	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-10.4333
chr1	78455216	78458947	protein_coding	Farsb	exon	ENSMUSG00000026245	ProperStrand	40	chr1	89673764	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	3	-9.8168
chr16	17360805	17360823	protein_coding	Pi4ka	intron	ENSMUSG00000041720	ProperStrand	39	chr11	97642952	97643021	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.2331
chr8	77651235	77651335	protein_coding	Mcm5	utr3	ENSMUSG00000005410	ProperStrand	199	chr7	52382234	52382250	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-5.9089
chr10	85348000	85348041	protein_coding	Pwp1	intron	ENSMUSG00000001785	ProperStrand	5	chr5	121655102	121655153	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-8.7807
chr11	5180669	5180685	protein_coding	Znrf3	utr3	ENSMUSG00000041961	NonProperStrand	210	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-3.4779
chrX	97020462	97020484	protein_coding	Tmem28	intron	ENSMUSG00000071719	NonProperStrand	4	chr1	162967490	162967559	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	3	-19.8676
chr8	109577926	109577942	protein_coding	Cog8	exon	ENSMUSG00000031916	NonProperStrand	6	chr16	23111447	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-9.1716
chr9	15119631	15119714	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	chr11	68924453	68924505	tRNA	tRNA400-SerCGA	.	1083242	ProperStrand	7	1	-6.8089
chr9	15118246	15118328	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	chr2	144091716	144091847	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	ProperStrand	549	3	-1.4028
chr17	56761504	56761869	protein_coding	Lonp1	exon	ENSMUSG00000041168	ProperStrand	83	chr9	45590086	45590150	protein_coding	Cep164	exon	ENSMUSG00000043987	ProperStrand	7	1	-17.0452
chr15	28302039	28302056	protein_coding	Dnahc5	exon	ENSMUSG00000022262	NonProperStrand	18	chr16	23111448	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.2408
chr4	57375690	57375706	lincRNA	1700042G15Rik	intron	ENSMUSG00000087044	NonProperStrand	5	chr16	23111447	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-5.8178
chr18	43215831	43215921	protein_coding	Ppp2r2b	intron	ENSMUSG00000024500	ProperStrand	25	chr14	48136994	48137084	protein_coding	Fbxo34	intron	ENSMUSG00000037536	NonProperStrand	1	1	-inf
mmu-miR-6240	1	17	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr16	45095879	45095895	protein_coding	Ccdc80	exon	ENSMUSG00000022665	ProperStrand	15	1	-8.6903
chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr9	107158409	107158509	protein_coding	Mapkapk3	utr3	ENSMUSG00000032577	ProperStrand	16	2	-14.5200
chr2	90235314	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	114028265	114028282	protein_coding	Wscd2	intron	ENSMUSG00000063430	ProperStrand	8	1	-8.5166
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr19	10979699	10979799	protein_coding	Prpf19	utr3	ENSMUSG00000024735	ProperStrand	75	1	-5.9294
chr2	71066711	71074025	protein_coding	Dync1i2	exon	ENSMUSG00000027012	ProperStrand	35	chr11	69481373	69481453	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-4.2039
chr2	91490316	91490333	protein_coding	Arhgap1	utr5	ENSMUSG00000027247	NonProperStrand	2	chr11	69481370	69481470	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-10.4764
chr19	46576912	46576992	protein_coding	Trim8	utr5	ENSMUSG00000025034	ProperStrand	29	chr3	68889026	68889116	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	2	-7.7049
chr18	80646323	80646413	protein_coding	Ctdp1	exon	ENSMUSG00000033323	ProperStrand	69	chr4	131866156	131866236	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-5.8154
chr5	100463453	100463540	protein_coding	Hnrpdl	utr3	ENSMUSG00000029328	ProperStrand	39	chr14	76247746	76247837	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-4.9994
chr14	50393342	50393378	protein_coding	3632451O06Rik	exon	ENSMUSG00000036242	ProperStrand	5	chr2	26493364	26493464	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-8.7753
chr12	68763442	68763464	LINE	L1Md_F2	L1	chr12L1Md_F268763215	NonProperStrand	1	chr1	7125319	7125393	protein_coding	Pcmtd1	intron	ENSMUSG00000051285	ProperStrand	19	1	-inf
chr4	53873599	53873648	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	chr10	127521199	127521270	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	1	-4.6015
chr6	97350316	97350334	protein_coding	Frmd4b	intron	ENSMUSG00000030064	ProperStrand	13	chr7	29136552	29136654	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.2243
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr15	82980150	82980192	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-2.9529
chr4	133088524	133088614	protein_coding	Nudc	utr3	ENSMUSG00000028851	ProperStrand	80	chr7	117189975	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.8168
chr4	116779152	116779168	protein_coding	Ptch2	intron	ENSMUSG00000028681	ProperStrand	14	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-11.5510
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	46137693	46137760	protein_coding	Pprc1	exon	ENSMUSG00000055491	ProperStrand	143	1	-2.8613
chr4	41066538	41066555	protein_coding	Nol6	exon	ENSMUSG00000028430	ProperStrand	98	chr9	110794375	110794392	protein_coding	Als2cl	exon	ENSMUSG00000044037	ProperStrand	10	1	-15.9836
chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	chr13	23831264	23831345	protein_coding	Hist1h1c	exon	ENSMUSG00000036181	ProperStrand	99	1	-8.2071
chr4	53873600	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	chr9	120039557	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	9	-8.1906
chr11	52907546	52907562	protein_coding	Fstl4	intron	ENSMUSG00000036264	ProperStrand	27	chr1	162965531	162965592	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.7840
chr13	21612816	21617008	protein_coding	Zfp192	exon	ENSMUSG00000063894	ProperStrand	12	chr4	131865483	131865514	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-7.1824
chr19	15991691	15991730	protein_coding	Psat1	exon	ENSMUSG00000024640	ProperStrand	33	chr3	68889186	68889233	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-4.3755
chr2	93633270	93633286	protein_coding	Ext2	intron	ENSMUSG00000027198	ProperStrand	49	chr4	131865866	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.0906
chr7	82638636	82638736	protein_coding	Akap13	intron	ENSMUSG00000066406	ProperStrand	80	chr16	23110972	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-0.8730
chr10	14387820	14387849	protein_coding	Vta1	exon	ENSMUSG00000019868	ProperStrand	12	chr10	61731970	61732045	protein_coding	Hk1	utr3	ENSMUSG00000037012	ProperStrand	84	1	-15.9481
chr13	91062799	91063247	protein_coding	Rps23	exon	ENSMUSG00000049517	ProperStrand	34	chr11	69483191	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.4615
chr14	34745911	34745927	protein_coding	Gdf10	exon	ENSMUSG00000021943	NonProperStrand	5	chr2	158451026	158451043	protein_coding	Actr5	exon	ENSMUSG00000037761	NonProperStrand	94	1	-17.2772
chr14	99522473	99522523	protein_coding	Pibf1	intron	ENSMUSG00000022064	ProperStrand	32	chr4	131865855	131865906	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.8186
chr2	86138158	86138174	protein_coding	Olfr1052	exon	ENSMUSG00000047149	NonProperStrand	119	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.3775
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr2	131005220	131005236	protein_coding	Cenpb	exon	ENSMUSG00000068267	NonProperStrand	38	1	-9.5117
chr6	114979528	114979553	protein_coding	1500001M20Rik	intron	ENSMUSG00000030316	ProperStrand	6	chr3	108357258	108357349	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-9.2183
chr5	115939534	115939612	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr1	9932550	9932596	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-2.5433
chr9	79606352	79607492	protein_coding	Cox7a2	utr5	ENSMUSG00000032330	ProperStrand	10	chr9	107694303	107698851	protein_coding	Rbm6	exon	ENSMUSG00000032582	ProperStrand	9	1	-19.9862
chr1	53409486	53409502	protein_coding	Asnsd1	utr5	ENSMUSG00000026095	NonProperStrand	105	chr2	35056454	35056500	protein_coding	Rab14	utr5	ENSMUSG00000026878	ProperStrand	21	1	-14.3150
chr10	10768346	10768367	protein_coding	Grm1	intron	ENSMUSG00000019828	ProperStrand	38	chr13	48964909	48965027	protein_coding	Phf2	intron	ENSMUSG00000038025	ProperStrand	5	1	-18.6660
chr9	15130739	15130821	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	chr18	35102295	35102318	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	14	-19.4024
chr17	66217074	66234021	protein_coding	Ralbp1	utr5	ENSMUSG00000024096	ProperStrand	39	chr11	97642952	97643058	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	4	-11.0763
chr16	57391759	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr7	52382235	52382315	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	2	-5.1159
chr3	99003138	99003166	protein_coding	Wars2	intron	ENSMUSG00000004233	NonProperStrand	48	chr13	23391990	23392035	tRNA	tRNA97-ValCAC	.	514923	ProperStrand	52	2	-19.0600
chr4	117883347	117883622	protein_coding	Ptprf	exon	ENSMUSG00000033295	NonProperStrand	7	chr18	35716785	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	NonProperStrand	45	2	-20.8660
chr7	57101346	57101436	protein_coding	Prmt3	intron	ENSMUSG00000030505	ProperStrand	89	chr16	23111694	23111774	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.3138
chr7	112629988	112630005	protein_coding	Prkcdbp	intron	ENSMUSG00000037060	NonProperStrand	43	chr1	88252836	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-7.3033
chr18	73693111	73693184	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr4	122968584	122968702	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	4	-1.5476
chr17	66441210	66441252	protein_coding	Ndufv2	exon	ENSMUSG00000024099	ProperStrand	17	chr4	131908356	131908416	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-9.0132
chr9	107495056	107495156	protein_coding	Ifrd2	utr3	ENSMUSG00000010048	ProperStrand	8	chr9	15119704	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-6.5261
chr10	66689611	66689627	protein_coding	Jmjd1c	exon	ENSMUSG00000037876	ProperStrand	110	chr11	6519810	6519942	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	4	-inf
chr17	12962517	12962607	antisense	Airn	.	ENSMUSG00000078247	NonProperStrand	3	chr17	12962098	12962188	protein_coding	Igf2r	intron	ENSMUSG00000023830	ProperStrand	151	1	-17.9116
chr10	8442642	8442696	protein_coding	Sash1	utr3	ENSMUSG00000015305	ProperStrand	23	chr4	131908236	131908399	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-10.5928
chr16	22382999	22383099	protein_coding	Etv5	utr3	ENSMUSG00000013089	ProperStrand	88	chr1	162966007	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-2.9094
chr13	41922627	41922644	protein_coding	9530008L14Rik	intron	ENSMUSG00000058022	NonProperStrand	22	chr17	24857716	24857775	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.1130
chr14	8931489	8931505	protein_coding	Pxk	intron	ENSMUSG00000033885	NonProperStrand	3	chr3	123210912	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-8.0648
chr4	148735173	148735229	protein_coding	Ube4b	intron	ENSMUSG00000028960	ProperStrand	66	chr9	15118247	15118321	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.2924
chr10	126500781	126501461	protein_coding	Cdk4	utr5	ENSMUSG00000006728	ProperStrand	47	chr8	73419657	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-6.0849
chr17	35972482	35972572	protein_coding	Tubb5	exon	ENSMUSG00000001525	ProperStrand	624	chr17	35299561	35299641	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	5	-5.6846
chr11	97489600	97489617	protein_coding	E130012A19Rik	exon	ENSMUSG00000043439	NonProperStrand	110	chr2	26494731	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-3.7187
chr10	13234763	13234810	protein_coding	Fuca2	utr3	ENSMUSG00000019810	ProperStrand	4	chr10	23505148	23505215	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-16.0846
chr11	55089492	55089538	protein_coding	Fat2	exon	ENSMUSG00000055333	ProperStrand	39	chr16	23110530	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-5.5465
chr17	22334939	22335028	LTR	RLTRETN_Mm	ERVK	chr17RLTRETN_Mm22334697	ProperStrand	2	chr13	8766424	8766504	protein_coding	Adarb2	utr3	ENSMUSG00000052551	NonProperStrand	61	1	-19.5205
chr17	56116592	56116634	LTR	RLTR23	ERV1	chr17RLTR2356116581	NonProperStrand	1	chr10	62269710	62269726	protein_coding	Tet1	utr3	ENSMUSG00000047146	ProperStrand	286	1	-inf
mmu-miR-6240	3	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr4	136292257	136292362	protein_coding	Ephb2	intron	ENSMUSG00000028664	ProperStrand	21	1	-8.0023
chr6	48357327	48357367	protein_coding	Krba1	intron	ENSMUSG00000042810	ProperStrand	7	chr16	23110955	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.4785
chr4	140560342	140560986	protein_coding	Atp13a2	exon	ENSMUSG00000036622	ProperStrand	39	chr5	130300458	130300538	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.2732
chr2	32780092	32780167	protein_coding	Fam129b	utr3	ENSMUSG00000026796	ProperStrand	22	chr10	23505152	23505258	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-7.4556
chr9	56992975	56993024	protein_coding	Neil1	exon	ENSMUSG00000032298	ProperStrand	7	chr11	8870596	8870614	protein_coding	Pkd1l1	intron	ENSMUSG00000046634	NonProperStrand	15	1	-21.2664
chr4	146775420	146775510	lincRNA	Gm16889	intron	ENSMUSG00000084976	ProperStrand	2	chr2	158185529	158185551	lincRNA	9430008C03Rik	exon	ENSMUSG00000085385	ProperStrand	1039	1	-15.0745
chr2	174352303	174352393	LINE	L1Md_F3	L1	chr2L1Md_F3174351989	ProperStrand	1	chrX	16264110	16264200	protein_coding	Maoa	utr3	ENSMUSG00000025037	NonProperStrand	2	1	-inf
chr6	147936926	147936948	Simple_repeat	(TAGA)n	Simple_repeat	chr6(TAGA)n147936863	NonProperStrand	1	chr10	23505151	23505254	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-inf
chr16	8712263	8712280	protein_coding	Usp7	exon	ENSMUSG00000022710	ProperStrand	118	chr18	35102297	35102350	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-5.2634
chr11	42440243	42440259	protein_coding	Gabrb2	exon	ENSMUSG00000007653	ProperStrand	248	chr5	108334195	108334267	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-2.2404
chr4	116826700	116826768	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	chr3	88497852	88497942	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-1.4577
chr8	122059661	122059677	protein_coding	Mbtps1	intron	ENSMUSG00000031835	NonProperStrand	16	chr8	73281061	73281161	protein_coding	Rab3a	exon	ENSMUSG00000031840	ProperStrand	7	3	-inf
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr19	4195097	4195122	protein_coding	Ppp1ca	utr3	ENSMUSG00000040385	ProperStrand	40	1	-9.4208
chr11	94525204	94525304	protein_coding	Xylt2	utr3	ENSMUSG00000020868	ProperStrand	65	chr13	64896826	64896845	protein_coding	Cntnap3	intron	ENSMUSG00000033063	NonProperStrand	5	1	-18.0233
chr19	10932638	10932728	protein_coding	Tmem132a	exon	ENSMUSG00000024736	ProperStrand	26	chr11	69481354	69481434	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	5	-19.3462
chr1	155066332	155066395	protein_coding	Lamc1	utr3	ENSMUSG00000026478	ProperStrand	239	chr16	93834745	93834766	protein_coding	Morc3	intron	ENSMUSG00000039456	NonProperStrand	33	1	-11.7493
chr14	32103733	32103751	protein_coding	Dnahc1	exon	ENSMUSG00000019027	NonProperStrand	12	chr10	23505597	23505625	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-10.8214
chr6	125050945	125050988	protein_coding	Chd4	exon	ENSMUSG00000063870	ProperStrand	303	chr5	130300438	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-0.8513
chr13	22132893	22132939	protein_coding	Hist1h4i	exon	ENSMUSG00000060639	ProperStrand	8	chr2	144091785	144091875	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	ProperStrand	549	1	-13.0182
chr5	108698471	108698509	protein_coding	Dr1	utr5	ENSMUSG00000029265	ProperStrand	11	chr11	116299671	116299714	protein_coding	Fam100b	utr3	ENSMUSG00000050628	ProperStrand	97	1	-15.8346
chr9	77402321	77402337	LINE	L1_Mur3	L1	chr9L1_Mur377402134	NonProperStrand	1	chr8	125626338	125626605	protein_coding	Rpl13	utr5	ENSMUSG00000000740	ProperStrand	231	1	-inf
chr9	21637497	21637535	protein_coding	Dock6	exon	ENSMUSG00000032198	ProperStrand	155	chr8	98269959	98270015	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	3	-9.1514
chr8	87223593	87223610	protein_coding	Trmt1	exon	ENSMUSG00000001909	NonProperStrand	60	chr16	23111417	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.2589
chr11	75486592	75486692	protein_coding	Myo1c	utr3	ENSMUSG00000017774	ProperStrand	38	chr16	23110456	23110522	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.2698
chr4	62069877	62069902	protein_coding	Prpf4	utr5	ENSMUSG00000066148	ProperStrand	8	chr7	52381973	52382014	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-10.8292
chr4	131908230	131908476	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr9	120039533	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	12	-4.5161
chr4	107052062	107062838	protein_coding	Tmem48	intron	ENSMUSG00000028614	ProperStrand	42	chr10	23505152	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-5.0109
chr8	18693728	18693818	protein_coding	Mcph1	intron	ENSMUSG00000039842	ProperStrand	34	chr2	166890502	166890582	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	2	-13.8382
chr17	28726625	28731133	protein_coding	Srpk1	utr3	ENSMUSG00000004865	ProperStrand	61	chr7	29136525	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-4.1557
chr8	14934865	14934885	protein_coding	Arhgef10	intron	ENSMUSG00000071176	NonProperStrand	10	chr13	90238585	90238720	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	1	-12.3079
chr2	143780927	143782505	protein_coding	Rrbp1	exon	ENSMUSG00000027422	ProperStrand	76	chr10	23505152	23505219	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-0.9285
chr8	124135276	124135366	protein_coding	Zcchc14	intron	ENSMUSG00000061410	ProperStrand	22	chr5	130300435	130300515	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.3511
chr2	157288489	157288759	protein_coding	Src	exon	ENSMUSG00000027646	ProperStrand	32	chr3	123210854	123210921	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.1535
chr15	77789465	77789537	protein_coding	Eif3d	utr3	ENSMUSG00000016554	ProperStrand	69	chr10	86157351	86158281	protein_coding	Hsp90b1	exon	ENSMUSG00000020048	ProperStrand	396	1	-9.2531
chr6	117873988	117874018	protein_coding	Hnrnpf	exon	ENSMUSG00000042079	ProperStrand	147	chr11	62418038	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-3.8421
chr8	77636486	77636513	protein_coding	Mcm5	exon	ENSMUSG00000005410	ProperStrand	199	chr4	153410349	153410365	protein_coding	Ccdc27	exon	ENSMUSG00000039492	ProperStrand	94	1	-10.0066
chr8	73053510	73054848	protein_coding	Fkbp8	exon	ENSMUSG00000019428	ProperStrand	52	chr4	117317843	117317878	protein_coding	Eri3	intron	ENSMUSG00000033423	ProperStrand	246	2	-16.8636
chr19	59064715	59064732	protein_coding	4930506M07Rik	exon	ENSMUSG00000041362	ProperStrand	36	chr11	69481335	69481405	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-4.1502
chr8	106966387	106966612	protein_coding	Dync1li2	exon	ENSMUSG00000035770	ProperStrand	75	chr7	16482816	16483808	protein_coding	Crxos1	exon	ENSMUSG00000074365	ProperStrand	1	1	-inf
chr5	116010924	116013422	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	chr4	122970459	122970533	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	4	-13.7802
chr2	154361234	154361316	protein_coding	Cbfa2t2	utr3	ENSMUSG00000038533	ProperStrand	99	chr14	33005038	33005091	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-3.0731
chr15	76532523	76532573	protein_coding	Mfsd3	exon	ENSMUSG00000019080	ProperStrand	4	chr15	88989530	88989705	protein_coding	Plxnb2	exon	ENSMUSG00000036606	ProperStrand	119	3	-19.7985
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr5	73563222	73563238	protein_coding	Fryl	intron	ENSMUSG00000070733	ProperStrand	173	1	-6.6098
chr6	34695805	34695876	protein_coding	Cald1	exon	ENSMUSG00000029761	ProperStrand	19	chr16	33726534	33726550	protein_coding	Heg1	exon	ENSMUSG00000075254	NonProperStrand	37	1	-16.6310
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr12	17552949	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	2	-1.2744
chr11	80293854	80293870	protein_coding	Cdk5r1	utr3	ENSMUSG00000048895	ProperStrand	3	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.6896
chr2	158182155	158182180	lincRNA	9430008C03Rik	intron	ENSMUSG00000085385	ProperStrand	1039	chr9	120039533	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	8	-2.5375
chr13	48987273	48987373	protein_coding	Fam120a	exon	ENSMUSG00000038014	ProperStrand	76	chr7	150717298	150717350	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	5	-19.0761
chrX	132673815	132673833	protein_coding	Bex4	intron	ENSMUSG00000047844	NonProperStrand	70	chr19	8799830	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-4.6499
chr7	114354117	114354217	protein_coding	Rbmxl2	utr3	ENSMUSG00000073894	ProperStrand	23	chr4	131865931	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.4190
chr9	15118337	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	chr14	76372292	76372414	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	2	-0.8522
chr16	56035879	56035920	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	chr11	62418014	62418077	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	2	-3.0245
chr4	116949083	116949101	protein_coding	Rnf220	intron	ENSMUSG00000028677	NonProperStrand	7	chr16	23110919	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.4785
chr4	88817070	88817088	protein_coding	Mtap	exon	ENSMUSG00000062937	ProperStrand	10	chr11	62418058	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-9.1787
chr5	122772040	122772109	protein_coding	Pptc7	utr3	ENSMUSG00000038582	ProperStrand	9	chr19	8800373	8800463	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-7.2762
chr3	87730961	87731486	protein_coding-noncoding	Rrnad1	utr3	ENSMUSG00000004896	NonProperStrand	1	chr3	87731498	87731588	protein_coding	Rrnad1	exon	ENSMUSG00000004896	NonProperStrand	1	1	-inf
chr5	97846781	97846799	lincRNA	4930467D21Rik	intron	ENSMUSG00000085273	ProperStrand	7	chr14	33005139	33005210	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	5	-19.5735
chr4	13787020	13787036	protein_coding	Runx1t1	exon	ENSMUSG00000006586	ProperStrand	7	chr15	75427154	75427176	protein_coding	Gpihbp1	intron	ENSMUSG00000022579	NonProperStrand	1	1	-inf
chr11	68903339	68903525	protein_coding	Vamp2	exon	ENSMUSG00000020894	ProperStrand	8	chr2	18508668	18508710	tRNA	tRNA1947-AsnGTT	.	924896	ProperStrand	179	2	-18.6305
chr4	136486582	136486605	protein_coding	Epha8	utr3	ENSMUSG00000028661	ProperStrand	13	chr11	6428076	6428155	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	NonProperStrand	91	2	-19.2323
chr12	77129147	77130797	protein_coding	Syne2	exon	ENSMUSG00000063450	NonProperStrand	17	chr15	34370585	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-5.9911
chr2	127460472	127460489	protein_coding	Mal	utr3	ENSMUSG00000027375	ProperStrand	3	chr9	21602970	21602986	protein_coding	Kank2	utr5	ENSMUSG00000032194	ProperStrand	196	1	-17.5987
chr14	31827516	31827548	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	chr1	39605591	39605656	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	4	-6.1010
chr2	98506451	98506662	Satellite	SYNREP_MM	Satellite	chr2SYNREP_MM98506361	NonProperStrand	1	chr6	103599199	103599279	protein_coding	Chl1	intron	ENSMUSG00000030077	ProperStrand	2	1	-inf
chr10	109640049	109640066	SINE	RSINE1	B4	chr10RSINE1109639979	ProperStrand	51	chr7	106002470	106002486	protein_coding	Wnt11	utr3	ENSMUSG00000015957	ProperStrand	14	1	-16.6867
chr6	125059883	125073592	protein_coding	Chd4	exon	ENSMUSG00000063870	ProperStrand	303	chr7	116664809	116664924	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-0.8855
chr7	101043140	101043158	LTR	RMER15	ERVL	chr7RMER15101042791	ProperStrand	1	chr11	106362641	106362690	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-inf
chr7	53089954	53089975	protein_coding	Grin2d	intron	ENSMUSG00000002771	NonProperStrand	31	chr4	151433407	151433423	protein_coding	Nol9	utr3	ENSMUSG00000028948	ProperStrand	93	1	-13.7642
chr12	89699698	89699714	protein_coding	Adck1	utr3	ENSMUSG00000021044	NonProperStrand	42	chr2	71085911	71086851	protein_coding	Dync1i2	exon	ENSMUSG00000027012	ProperStrand	35	3	-inf
chr5	100855902	100855940	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr5	36813725	36813793	protein_coding	Grpel1	exon	ENSMUSG00000029198	ProperStrand	20	1	-8.8463
chr7	88471252	88472915	protein_coding	Pde8a	exon	ENSMUSG00000025584	ProperStrand	25	chr7	52713907	52713931	protein_coding	Ftl1	exon	ENSMUSG00000050708	ProperStrand	807	1	-9.8820
chr2	90235304	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	106770704	106770721	protein_coding	Cdcp2	intron	ENSMUSG00000047636	NonProperStrand	35	1	-5.5085
chr9	15130700	15130752	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	chr7	134671398	134671459	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	3	-9.4638
chr2	150160397	150160487	protein_coding	3300002I08Rik	intron	ENSMUSG00000063364	ProperStrand	2	chr7	116664815	116664895	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-9.7350
chr1	78031061	78031151	LINE	L1MC1	L1	chr1L1MC178031085	ProperStrand	1	chr1	78030820	78030900	SINE	B3A	B2	chr1B3A78030760	ProperStrand	1	1	-inf
chr16	92808636	92808654	protein_coding	Runx1	intron	ENSMUSG00000022952	NonProperStrand	17	chr19	8799021	8799089	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-8.3609
chr13	23647047	23647071	protein_coding	Hist1h1d	exon	ENSMUSG00000052565	ProperStrand	78	chr13	21292133	21292179	tRNA	tRNA65-LeuCAA	.	290333	ProperStrand	57	1	-12.8885
chr5	142459852	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	chr11	87262247	87262347	snoRNA	ENSMUSG00000070243_U3	.	ENSMUSG00000070243	ProperStrand	5	1	-15.7553
chr18	73950763	73950804	protein_coding	Me2	exon	ENSMUSG00000024556	ProperStrand	22	chr5	124526053	124526069	protein_coding	Abcb9	exon	ENSMUSG00000029408	NonProperStrand	3	1	-inf
chr3	35872946	35873046	protein_coding-noncoding	Mccc1	utr3	ENSMUSG00000027709	ProperStrand	5	chr17	24857796	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-7.1522
chr4	99636237	99637291	protein_coding	Pgm2	exon	ENSMUSG00000025791	ProperStrand	43	chr7	129364056	129364181	protein_coding	2010110P09Rik	exon	ENSMUSG00000030865	NonProperStrand	26	1	-15.6896
chr16	92450523	92450623	protein_coding	Rcan1	intron	ENSMUSG00000022951	ProperStrand	9	chr17	35087927	35087964	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-9.0335
chr5	34121266	34125171	protein_coding	Letm1	exon	ENSMUSG00000005299	ProperStrand	21	chr4	131865966	131865986	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.5891
chr2	29871169	29871472	protein_coding	Spna2	exon	ENSMUSG00000057738	ProperStrand	222	chr12	55797769	55797849	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	1	-5.1233
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr12	114290175	114290191	protein_coding	Pacs2	intron	ENSMUSG00000021143	NonProperStrand	302	3	-4.6653
chr3	153575089	153575108	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	chr3	153574606	153574654	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	3	-11.5780
chr15	98764417	98764459	protein_coding	Tuba1b	intron	ENSMUSG00000023004	ProperStrand	32	chr17	33961611	33966614	protein_coding	Ndufa7	exon	ENSMUSG00000041881	ProperStrand	64	1	-14.4487
chr10	122702149	122702167	protein_coding	Fam19a2	utr5	ENSMUSG00000044071	NonProperStrand	52	chr2	158182180	158182292	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-5.2806
chr14	58058604	58059850	protein_coding	Ift88	exon	ENSMUSG00000040040	ProperStrand	1	chr18	35716832	35716881	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-inf
chr12	113412393	113412648	protein_coding	Kif26a	exon	ENSMUSG00000021294	ProperStrand	8	chr16	23110916	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.2180
chr8	98245440	98245520	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	chr7	116663675	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-0.7971
chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr8	13876096	13876230	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	7	-1.0244
chr13	9833557	9833670	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr6	72388905	72388922	protein_coding	Mat2a	intron	ENSMUSG00000053907	ProperStrand	51	1	-5.2701
chr13	98263435	98263483	lincRNA	Gm11019	intron	ENSMUSG00000078952	ProperStrand	113	chr13	24824232	24824248	protein_coding	Fam65b	utr3	ENSMUSG00000036006	ProperStrand	51	2	-21.3534
chrX	99384672	99384688	protein_coding	Rps4x	utr5	ENSMUSG00000031320	NonProperStrand	7	chr7	52382237	52382259	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-12.7031
chr8	85689747	85689763	protein_coding	Tbc1d9	utr5	ENSMUSG00000031709	ProperStrand	66	chr2	26493383	26493496	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-3.5658
chr10	17933816	17933832	protein_coding	Ccdc28a	utr3	ENSMUSG00000059554	NonProperStrand	14	chr1	162965979	162966035	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-6.4421
chr4	108686224	108686314	protein_coding	Nrd1	exon	ENSMUSG00000053510	ProperStrand	76	chr17	39985111	39985191	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-5.4691
chr4	86566619	86566635	protein_coding	Acer2	utr3	ENSMUSG00000038007	ProperStrand	8	chr4	131908362	131908416	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-5.0428
chr7	134960924	134960940	protein_coding	Stx1b	intron	ENSMUSG00000030806	ProperStrand	1	chr4	131908302	131908357	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-inf
chr9	54997380	54997398	protein_coding	Ube2q2	utr5	ENSMUSG00000032307	ProperStrand	17	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.9909
chr5	115594481	115594567	protein_coding	Mlec	utr3	ENSMUSG00000048578	ProperStrand	47	chr18	35714143	35714193	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-3.8965
chr1	191492495	191494994	protein_coding	Cenpf	exon	ENSMUSG00000026605	ProperStrand	44	chr4	131865853	131865943	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.2687
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr6	70805499	70805581	snoRNA	ENSMUSG00000065750_SNORA5	.	ENSMUSG00000065750	ProperStrand	165	3	-16.4581
chr8	3810866	3810946	LINE	L1_Mus2	L1	chr8L1_Mus23809579	NonProperStrand	1	chr17	18084895	18084985	protein_coding	Fpr3	intron	ENSMUSG00000079700	ProperStrand	4	1	-inf
chr4	66133911	66133929	LINE	Lx5	L1	chr4Lx566133678	ProperStrand	15	chr8	72287172	72287188	protein_coding	Zfp866	utr3	ENSMUSG00000043090	NonProperStrand	134	1	-14.5213
chr9	78326898	78327766	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	3	-4.6792
chr12	56175442	56175487	protein_coding	2700097O09Rik	intron	ENSMUSG00000062198	ProperStrand	2	chr18	35716860	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-9.2832
chr9	15514257	15514276	protein_coding	Slc36a4	exon	ENSMUSG00000043885	ProperStrand	94	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.4840
chr13	36710102	36710192	Other	RMER1C	Other	chr13RMER1C36709495	ProperStrand	1	chr13	36710497	36710577	SINE	B3A	B2	chr13B3A36710481	ProperStrand	1	1	-inf
chr11	48616675	48616707	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	chr11	69483136	69483237	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-0.7467
chrX	132673816	132673833	protein_coding	Bex4	intron	ENSMUSG00000047844	NonProperStrand	70	chr9	110544350	110544366	protein_coding	Nbeal2	exon	ENSMUSG00000056724	ProperStrand	161	1	-11.0225
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	24665419	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	12	-1.1823
chr4	119941547	119941564	protein_coding	Foxo6	exon	ENSMUSG00000052135	ProperStrand	31	chr16	23110890	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.0160
chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	chr6	31476571	31476640	protein_coding	Podxl	exon	ENSMUSG00000025608	ProperStrand	37	1	-10.8483
chr6	120616763	120616785	protein_coding	Cecr2	intron	ENSMUSG00000071226	NonProperStrand	6	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-8.2222
chr10	58604429	58604446	protein_coding	Sept10	exon	ENSMUSG00000019917	ProperStrand	34	chr4	131908358	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.3115
chr6	118467978	118468409	protein_coding	Ankrd26	utr3	ENSMUSG00000007827	ProperStrand	8	chr16	30362793	30366968	protein_coding	Atp13a3	exon	ENSMUSG00000022533	ProperStrand	45	1	-17.8233
chr9	107648508	107652125	protein_coding	Rbm5	exon	ENSMUSG00000032580	ProperStrand	19	chr10	23505153	23505233	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-10.9678
chr10	77464106	77464173	protein_coding	Pfkl	exon	ENSMUSG00000020277	ProperStrand	179	chr2	26493412	26493473	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-1.8462
chr4	3762212	3762294	protein_coding-noncoding	Rps20	utr3	ENSMUSG00000028234	ProperStrand	4	chr19	8963026	8963081	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-7.6308
chr9	94580342	94580359	protein_coding	Slc9a9	intron	ENSMUSG00000031129	ProperStrand	7	chr7	116663633	116663710	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-6.6732
chr4	133097126	133101763	protein_coding	Nudc	exon	ENSMUSG00000028851	ProperStrand	80	chrX	34454873	34454891	protein_coding	Sept6	utr3	ENSMUSG00000050379	NonProperStrand	2	1	-inf
chr1	95582417	95582996	protein_coding	Bok	utr5	ENSMUSG00000026278	ProperStrand	7	chr18	73693166	73693188	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-9.9039
chr11	68067261	68067277	protein_coding	Ntn1	intron	ENSMUSG00000020902	NonProperStrand	194	chr15	80839305	80839685	protein_coding	Sgsm3	exon	ENSMUSG00000042303	ProperStrand	11	1	-14.4236
chr19	8799829	8799889	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	chr1	39605591	39605632	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	2	-0.7921
chr15	78127411	78127427	protein_coding	Csf2rb2	exon	ENSMUSG00000071714	NonProperStrand	14	chr11	106362556	106362634	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-10.3542
chr4	131908363	131908464	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr17	43765379	43765396	protein_coding	Tdrd6	exon	ENSMUSG00000040140	NonProperStrand	15	1	-10.0651
chr11	76241270	76241312	protein_coding	Abr	intron	ENSMUSG00000017631	ProperStrand	33	chr4	14474050	14474068	protein_coding	Slc26a7	intron	ENSMUSG00000040569	ProperStrand	1	1	-inf
chr2	158184092	158184162	snoRNA	ENSMUSG00000064995_SNORA71	.	ENSMUSG00000064995	ProperStrand	430	chr19	8799051	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	2	-3.9150
chr7	52481122	52481138	protein_coding	Tead2	exon	ENSMUSG00000030796	ProperStrand	39	chr19	8800356	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-4.3397
chr4	45118296	45118376	protein_coding	Tomm5	utr3	ENSMUSG00000078713	ProperStrand	2	chr6	87950508	87954238	protein_coding	Rab7	exon	ENSMUSG00000079477	ProperStrand	33	1	-19.7718
chr10	120709244	120712786	protein_coding	Tbc1d30	exon	ENSMUSG00000052302	ProperStrand	233	chr5	121655101	121655151	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-1.4537
chr17	92416580	92416598	LTR	RMER13B	ERVK	chr17RMER13B92415865	ProperStrand	1	chr3	68889186	68889215	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-inf
chr6	25638699	25638715	protein_coding	Gpr37	exon	ENSMUSG00000039904	ProperStrand	49	chr5	138182305	138182343	protein_coding	6430598A04Rik	utr5	ENSMUSG00000045348	ProperStrand	7	1	-18.6027
chr16	57391757	57391792	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr10	39978405	39978484	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-0.8011
chr1	95400029	95400082	protein_coding	Sept2	exon	ENSMUSG00000026276	ProperStrand	136	chr3	123210891	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-0.8968
chr6	90320130	90320230	protein_coding	Zxdc	exon	ENSMUSG00000034430	ProperStrand	10	chr5	23050146	23050198	protein_coding	Srpk2	intron	ENSMUSG00000062604	ProperStrand	51	1	-17.4450
chr11	77499808	77499835	protein_coding	Nufip2	exon	ENSMUSG00000037857	ProperStrand	36	chr11	62418015	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-6.5660
chr14	31332715	31332731	protein_coding	Dcp1a	exon	ENSMUSG00000021962	NonProperStrand	4	chr6	125113359	125115293	protein_coding	Gapdh	exon	ENSMUSG00000057666	ProperStrand	356	1	-15.4314
chr11	85914171	85914188	protein_coding	Brip1	intron	ENSMUSG00000034329	ProperStrand	16	chrX	84483704	84483750	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-10.9290
chr5	34084633	34084649	protein_coding	Letm1	utr3	ENSMUSG00000005299	NonProperStrand	145	chr1	164627818	164627839	protein_coding	Prrc2c	exon	ENSMUSG00000040225	ProperStrand	413	1	-7.6871
chr3	97457660	97457677	protein_coding	Fmo5	utr3	ENSMUSG00000028088	NonProperStrand	9	chr3	88729331	88730940	protein_coding	Dap3	exon	ENSMUSG00000068921	ProperStrand	58	3	-inf
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr12	110923173	110923231	snoRNA	ENSMUSG00000084487_SNORD113	.	ENSMUSG00000084487	ProperStrand	183	1	-4.8443
chr4	133042164	133042247	protein_coding	Fam46b	exon	ENSMUSG00000046694	ProperStrand	2	chr17	24665468	24665491	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	2	-inf
chr5	111812088	111812105	protein_coding	Pitpnb	exon	ENSMUSG00000050017	ProperStrand	137	chr16	23110459	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.1891
chr9	4299367	4302483	protein_coding	Aasdhppt	exon	ENSMUSG00000025894	ProperStrand	121	chr15	79913292	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.3495
chr13	6593699	6593753	protein_coding-noncoding	Pfkp	utr3	ENSMUSG00000021196	ProperStrand	20	chr5	74489651	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-5.9076
chr12	118355247	118355264	protein_coding	Ptprn2	intron	ENSMUSG00000056553	ProperStrand	13	chr14	76247711	76247833	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-7.1966
chr10	122002786	122002876	LINE	L1Md_F2	L1	chr10L1Md_F2122002095	NonProperStrand	23	chr9	84183021	84183111	LINE	L1Md_F2	L1	chr9L1Md_F284182437	NonProperStrand	1	1	-inf
chr18	57400307	57400324	protein_coding	Megf10	exon	ENSMUSG00000024593	ProperStrand	143	chr4	122970467	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-5.7004
chr11	93780165	93780245	protein_coding-noncoding	Mbtd1	utr5	ENSMUSG00000059474	ProperStrand	15	chr11	93771708	93773767	protein_coding	Mbtd1	exon	ENSMUSG00000059474	ProperStrand	36	15	-inf
chr1	40060630	40060713	protein_coding	Map4k4	exon	ENSMUSG00000026074	ProperStrand	348	chr4	133089189	133089354	protein_coding	Nudc	exon	ENSMUSG00000028851	ProperStrand	80	2	-14.5871
chr3	151884368	151885145	protein_coding	Fubp1	exon	ENSMUSG00000028034	ProperStrand	56	chr5	130300460	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	8	-20.6146
chr6	42306927	42306945	protein_coding	Zyx	intron	ENSMUSG00000029860	ProperStrand	9	chr5	121655031	121655099	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-7.5103
chr2	150362803	150362893	LTR	RLTR19-int	ERVK	chr2RLTR19-int150362752	ProperStrand	1	chr2	69521950	69522039	protein_coding	Kbtbd10	utr3	ENSMUSG00000075307	ProperStrand	2	1	-inf
chr10	127521220	127521272	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	chr17	13112452	13112542	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-0.8539
chr12	88488443	88496424	protein_coding	Pomt2	exon	ENSMUSG00000034126	NonProperStrand	331	chr5	116026224	116028954	protein_coding	Gcn1l1	exon	ENSMUSG00000041638	ProperStrand	408	1	-6.0823
chr4	148608847	148608864	protein_coding	Kif1b	utr3	ENSMUSG00000063077	NonProperStrand	19	chr13	96100582	96100692	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	1	-10.3936
chr1	34237006	34237051	protein_coding	Dst	exon	ENSMUSG00000026131	ProperStrand	461	chr11	78150285	78150301	protein_coding	Pigs	exon	ENSMUSG00000041958	NonProperStrand	138	1	-7.5675
chr16	33368341	33368421	SINE	B1_Mur2	Alu	chr16B1_Mur233368314	NonProperStrand	1	chr16	33368133	33368223	SINE	B3A	B2	chr16B3A33368145	NonProperStrand	1	1	-inf
chr3	101394524	101395051	protein_coding	Atp1a1	exon	ENSMUSG00000033161	ProperStrand	316	chr15	82980195	82980226	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	3	-9.5292
chr12	99497602	99497618	protein_coding	Galc	utr5	ENSMUSG00000021003	NonProperStrand	65	chr19	8800421	8800478	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-3.3830
chr7	20526640	20526657	protein_coding	2210010C17Rik	intron	ENSMUSG00000040498	NonProperStrand	18	chr16	23110828	23110889	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7867
chr2	79132657	79132674	protein_coding-noncoding	Itga4	utr5	ENSMUSG00000027009	NonProperStrand	118	chr11	84870682	84870699	protein_coding	Usp32	intron	ENSMUSG00000000804	ProperStrand	45	1	-12.5357
chr9	98766058	98766158	protein_coding	2410012M07Rik	exon	ENSMUSG00000090470	ProperStrand	31	chr6	71832615	71832673	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	26	-19.1898
chr15	103028917	103029017	protein_coding	Cbx5	utr3	ENSMUSG00000009575	ProperStrand	98	chr17	6959137	6959189	protein_coding	Ezr	exon	ENSMUSG00000052397	ProperStrand	126	1	-10.8376
chr4	40684364	40685348	protein_coding	Smu1	exon	ENSMUSG00000028409	ProperStrand	23	chr17	13112470	13112550	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-6.4633
chr2	130103751	130103811	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	chr10	110918547	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	13	-12.2199
chr9	45187994	45188041	protein_coding	Fxyd6	intron	ENSMUSG00000066705	ProperStrand	30	chr16	23110940	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0481
chr2	129004103	129004121	antisense	AI847159	.	ENSMUSG00000084826	NonProperStrand	63	chr12	60141349	60141412	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-6.7325
chr4	63389602	63389618	protein_coding	Tnfsf15	utr3	ENSMUSG00000050395	NonProperStrand	121	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-10.2769
chr11	77255478	77262890	protein_coding	Ssh2	exon	ENSMUSG00000037926	ProperStrand	18	chr17	13112473	13112563	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-6.9578
chr8	108603149	108603223	protein_coding	Nfatc3	exon	ENSMUSG00000031902	ProperStrand	75	chr4	122970425	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-6.9710
chr13	112540780	112541440	protein_coding	Map3k1	exon	ENSMUSG00000021754	ProperStrand	113	chr1	102076758	102076790	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	1	-8.1689
chr11	50019272	50019362	protein_coding-noncoding	Sqstm1	utr3	ENSMUSG00000015837	NonProperStrand	1	chr11	50019111	50019191	protein_coding	Sqstm1	intron	ENSMUSG00000015837	NonProperStrand	1	1	-inf
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr19	8963027	8963124	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-1.6206
chr1	115800642	115800662	lincRNA	9330185C12Rik	intron	ENSMUSG00000086520	ProperStrand	45	chr9	15118323	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-4.0026
chr5	31350207	31350223	protein_coding	Slc5a6	utr5	ENSMUSG00000006641	NonProperStrand	3	chr10	6063958	6063975	protein_coding	Akap12	intron	ENSMUSG00000038587	ProperStrand	1008	1	-14.0385
chr11	100338013	100338094	protein_coding	Acly	utr3	ENSMUSG00000020917	ProperStrand	183	chr17	33786866	33786956	protein_coding	Hnrnpm	exon	ENSMUSG00000059208	ProperStrand	56	9	-19.4591
chr7	27980506	27981040	protein_coding	Snrpa	utr5	ENSMUSG00000061479	ProperStrand	56	chr8	73419657	73419715	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.2551
chrX	71198700	71198790	protein_coding	Hcfc1	exon	ENSMUSG00000031386	ProperStrand	424	chr4	122968597	122968658	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-2.6047
chr12	68764898	68764916	LINE	L1_Mus2	L1	chr12L1_Mus268763857	ProperStrand	2	chr11	6428054	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-10.4671
chr7	106210819	106210875	protein_coding	Uvrag	intron	ENSMUSG00000035354	ProperStrand	13	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.3283
chr7	109827127	109827186	protein_coding	Trim68	exon	ENSMUSG00000073968	ProperStrand	23	chr8	73419683	73419783	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.9417
chr2	90235297	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	89379266	89379283	protein_coding	Ngef	exon	ENSMUSG00000026259	ProperStrand	7	1	-8.8025
chr2	25326726	25326743	LTR	ORR1E	MaLR	chr2ORR1E25326623	ProperStrand	1	chr19	8963082	8963172	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-inf
chr15	63775921	63775960	protein_coding	Fam49b	exon	ENSMUSG00000022378	ProperStrand	33	chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	1	-9.7968
chr16	13123565	13123583	protein_coding	Ercc4	exon	ENSMUSG00000022545	ProperStrand	5	chr16	23110890	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr7	135864137	135867474	protein_coding	Mcmbp	exon	ENSMUSG00000048170	ProperStrand	87	chr10	23505150	23505204	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-0.7713
chr18	45015074	45016675	protein_coding	Ythdc2	exon	ENSMUSG00000034653	ProperStrand	9	chr16	43886794	43886851	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	1	-11.9555
chr11	57854193	57872477	protein_coding	Larp1	utr3	ENSMUSG00000037331	ProperStrand	201	chr3	123210854	123210948	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	4	-2.8521
chr6	71444109	71444128	protein_coding	Rnf103	utr5	ENSMUSG00000052656	NonProperStrand	11	chr19	8963086	8963169	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.4574
chr8	108213285	108213497	protein_coding	Rltpr	exon	ENSMUSG00000050357	ProperStrand	8	chr9	120039543	120039633	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-7.2948
chr15	100358955	100358972	protein_coding	Tfcp2	exon	ENSMUSG00000009733	NonProperStrand	77	chr11	48615805	48616920	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	2	-14.7177
chr1	161257212	161257235	protein_coding	Rfwd2	exon	ENSMUSG00000040782	ProperStrand	17	chr16	23111777	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.1536
chr12	112215257	112215273	protein_coding	Ankrd9	exon	ENSMUSG00000037904	NonProperStrand	35	chr17	35089182	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-6.5492
chr1	120195778	120195847	protein_coding	Tsn	utr3	ENSMUSG00000026374	ProperStrand	4	chr10	23505152	23505186	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-6.2798
chr5	118517050	118517276	protein_coding	Fbxw8	utr3	ENSMUSG00000032867	ProperStrand	61	chr11	97642952	97643062	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-4.3229
chr14	20600584	20624562	protein_coding	Nid2	exon	ENSMUSG00000021806	ProperStrand	372	chr19	8963027	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-0.8335
chr2	83693562	83693578	protein_coding	Fam171b	exon	ENSMUSG00000048388	NonProperStrand	175	chr6	124665248	124665282	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	1	-4.8392
chr2	4974190	4974207	protein_coding	Optn	exon	ENSMUSG00000026672	ProperStrand	451	chr11	6428035	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-1.5042
chr5	74489202	74489289	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	NonProperStrand	6	chrX	34622906	34622951	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	NonProperStrand	26	1	-18.7113
mmu-miR-6240	2	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr3	104603926	104604016	protein_coding	Mov10	exon	ENSMUSG00000002227	ProperStrand	96	2	-8.2192
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr18	83156768	83156784	protein_coding	Zfp516	exon	ENSMUSG00000058881	NonProperStrand	15	2	-18.6247
chr5	123823451	123823541	protein_coding	Bcl7a	utr3	ENSMUSG00000029438	ProperStrand	27	chr9	44142833	44142921	protein_coding	H2afx	utr5	ENSMUSG00000049932	ProperStrand	137	1	-13.2720
chr4	135885089	135885118	protein_coding	Hnrnpr	intron	ENSMUSG00000066037	ProperStrand	15	chr1	162965535	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-13.9476
chr11	62365848	62365948	protein_coding	Ubb	exon	ENSMUSG00000019505	ProperStrand	32	chr16	23111756	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.9714
chrX	71188326	71188374	protein_coding	Hcfc1	utr3	ENSMUSG00000031386	ProperStrand	424	chr10	90581043	90581133	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	2	-2.6404
chr13	55103835	55103851	protein_coding	Unc5a	exon	ENSMUSG00000025876	NonProperStrand	96	chr12	106269290	106269351	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	2	-5.5963
chr15	59149424	59149524	protein_coding	Sqle	exon	ENSMUSG00000022351	ProperStrand	19	chr6	85388850	85388866	protein_coding	Smyd5	exon	ENSMUSG00000033706	NonProperStrand	30	1	-17.0594
chr4	141018439	141018456	protein_coding	Zbtb17	intron	ENSMUSG00000006215	NonProperStrand	7	chr11	97643007	97643060	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-6.6269
chr15	36931638	36931674	protein_coding	Zfp706	exon	ENSMUSG00000062397	ProperStrand	6	chr7	116663634	116663724	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-7.0045
chr1	66468281	66468297	protein_coding	Mtap2	exon	ENSMUSG00000015222	ProperStrand	6	chr16	11144116	11144258	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	1	-15.2045
chr19	46079316	46079332	protein_coding	Hps6	exon	ENSMUSG00000074811	ProperStrand	56	chr12	17552950	17553029	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-5.2233
chr2	89368462	89368478	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	chr18	33954820	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-1.1121
chr7	133633121	133633309	protein_coding	Tufm	exon	ENSMUSG00000073838	ProperStrand	28	chr9	15118332	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-4.9141
chr8	37635816	37635846	protein_coding	Dlc1	exon	ENSMUSG00000031523	ProperStrand	89	chr11	97643007	97643092	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-5.1236
chr4	43505840	43505930	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr12	103644038	103644087	protein_coding	Lgmn	exon	ENSMUSG00000021190	ProperStrand	18	1	-5.3613
chr10	79428056	79428784	protein_coding	Wdr18	exon	ENSMUSG00000035754	ProperStrand	16	chr15	34370545	34370580	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	6	-inf
chr7	81537651	81537741	antisense	Gm7580	.	ENSMUSG00000085161	ProperStrand	2	chr7	81537511	81537601	protein_coding	Slco3a1	intron	ENSMUSG00000025790	NonProperStrand	3	1	-inf
chr11	98577823	98577923	protein_coding-noncoding	Med24	utr3	ENSMUSG00000017210	ProperStrand	1	chr19	8963026	8963044	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-inf
chr1	184414408	184414471	protein_coding	Capn2	exon	ENSMUSG00000026509	ProperStrand	6	chr18	35716797	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-6.6008
chr12	36219400	36219416	protein_coding	Ahr	utr5	ENSMUSG00000019256	NonProperStrand	64	chr10	90432659	90432677	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	1	-10.4888
chr15	76731114	76731189	protein_coding	Commd5	exon	ENSMUSG00000055041	ProperStrand	4	chr10	23505157	23505247	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-inf
chr19	41313286	41315090	protein_coding	Tm9sf3	exon	ENSMUSG00000025016	ProperStrand	21	chr18	35716789	35716879	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.0576
chr1	74337860	74338032	protein_coding	Tmbim1	exon	ENSMUSG00000006301	ProperStrand	13	chr7	29136598	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-8.6857
chr17	46814084	46814100	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr19	44188460	44188492	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	1	-3.8310
chr4	106770704	106770721	protein_coding	Cdcp2	intron	ENSMUSG00000047636	NonProperStrand	35	chr1	89673714	89673737	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-4.2696
chr9	103092234	103092299	protein_coding	Srprb	utr3	ENSMUSG00000032553	ProperStrand	11	chr3	123210908	123210970	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.2109
chr15	97639117	97639161	protein_coding	Hdac7	exon	ENSMUSG00000022475	ProperStrand	7	chr6	145764118	145764134	protein_coding	Rassf8	exon	ENSMUSG00000030259	ProperStrand	23	1	-18.6952
chr17	66707382	66707450	protein_coding	1110012J17Rik	exon	ENSMUSG00000052105	ProperStrand	60	chr14	33005063	33005095	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-3.9936
chr7	116663648	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	chr2	166890780	166890837	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	4	-2.8960
chr2	160791728	160791818	protein_coding	Chd6	exon	ENSMUSG00000057133	ProperStrand	104	chr9	120038610	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.0958
chr2	129998658	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr5	103431794	103431812	protein_coding	Mapk10	intron	ENSMUSG00000046709	ProperStrand	18	1	-10.5460
chr2	164525832	164526307	protein_coding	Spint4	exon	ENSMUSG00000017310	ProperStrand	21	chr11	62416620	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-7.2498
chr7	31888561	31888577	protein_coding	Hpn	exon	ENSMUSG00000001249	NonProperStrand	20	chr9	61761209	61761236	protein_coding	Rplp1	exon	ENSMUSG00000007892	ProperStrand	116	1	-14.2172
chr9	65049530	65049621	snRNA	ENSMUSG00000075930_U5	.	ENSMUSG00000075930	ProperStrand	175	chr11	77996557	77996622	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-4.0276
chr2	145809346	145809362	protein_coding	4930529M08Rik	intron	ENSMUSG00000037143	NonProperStrand	10	chr18	54051014	54051032	protein_coding	Csnk1g3	intron	ENSMUSG00000073563	ProperStrand	13	1	-22.1951
chr11	102294587	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr9	36587750	36587815	protein_coding	Ei24	exon	ENSMUSG00000062762	ProperStrand	25	1	-10.6621
chr5	121828827	121828843	protein_coding	Trafd1	exon	ENSMUSG00000042726	ProperStrand	81	chr14	52694789	52694807	protein_coding	Hnrnpc	exon	ENSMUSG00000060373	ProperStrand	75	1	-12.2619
chr2	26444662	26444872	protein_coding	Egfl7	exon	ENSMUSG00000026921	ProperStrand	44	chr11	69483136	69483180	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.9921
chr11	70460296	70460392	protein_coding	Slc25a11	utr5	ENSMUSG00000014606	ProperStrand	5	chr14	31827477	31827497	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-12.0933
chr1	145593774	145593791	protein_coding	Glrx2	utr3	ENSMUSG00000018196	NonProperStrand	5	chr16	23111448	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-5.8178
chr11	70067503	70067520	protein_coding	Alox12	intron	ENSMUSG00000000320	ProperStrand	16	chr15	79910268	79910806	protein_coding	Rpl3	exon	ENSMUSG00000060036	ProperStrand	8342	1	-6.1593
chr1	177555700	177555720	protein_coding	Fh1	utr5	ENSMUSG00000026526	ProperStrand	37	chr7	116663464	116663498	protein_coding	Rpl27a	exon	ENSMUSG00000046364	ProperStrand	149	1	-12.4632
chr2	152119846	152119862	protein_coding	Tbc1d20	intron	ENSMUSG00000027465	ProperStrand	27	chr4	131869940	131870177	protein_coding	Trnau1ap	exon	ENSMUSG00000028898	ProperStrand	5	1	-19.7151
chrX	70604346	70604362	protein_coding	Zfp275	utr3	ENSMUSG00000031365	NonProperStrand	2	chr2	166890503	166890565	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-15.0209
chr7	137307338	137307438	protein_coding	Fgfr2	utr3	ENSMUSG00000030849	ProperStrand	100	chr1	162965562	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.3792
chrX	98858782	98858848	protein_coding	Ogt	exon	ENSMUSG00000034160	ProperStrand	49	chr8	73419657	73419729	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.4996
chr2	120872244	120872260	protein_coding	Tgm5	exon	ENSMUSG00000053675	NonProperStrand	163	chr12	17552995	17553054	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-3.2104
chrX	51079024	51079041	protein_coding	Zfp36l3	exon	ENSMUSG00000059334	ProperStrand	13	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-8.9235
chr4	143486645	143486661	protein_coding	Pramef6	exon	ENSMUSG00000078512	ProperStrand	21	chr9	120039533	120039628	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-5.3228
chr10	99923613	99923629	protein_coding	Tmtc3	exon	ENSMUSG00000036676	NonProperStrand	9	chr1	193730797	193730813	protein_coding	Slc30a1	utr5	ENSMUSG00000037434	ProperStrand	42	1	-17.6717
chr1	173931488	173931588	protein_coding	Vangl2	utr3	ENSMUSG00000026556	ProperStrand	37	chr5	36050296	36050330	protein_coding	Sh3tc1	intron	ENSMUSG00000036553	ProperStrand	16	5	-21.3542
chr4	108488454	108488502	protein_coding	Btf3l4	utr3	ENSMUSG00000028568	ProperStrand	3	chr5	104868487	104869255	protein_coding	Spp1	exon	ENSMUSG00000029304	ProperStrand	52	1	-inf
chr2	165203081	165203097	protein_coding	Zfp334	utr3	ENSMUSG00000017667	ProperStrand	8	chr2	130101972	130102050	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	NonProperStrand	12	1	-19.5927
mmu-miR-295-5p	4	22	miRNA	mmu-miR-295-5p	.	mmu-miR-295-5p	ProperStrand	3	chr5	121655016	121655153	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-9.9796
chr5	74489215	74489305	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr3	141967378	141975100	protein_coding	Pdlim5	exon	ENSMUSG00000028273	ProperStrand	17	1	-8.1460
chr8	113494653	113494703	protein_coding	St3gal2	utr3	ENSMUSG00000031749	ProperStrand	206	chr9	120039545	120039622	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	6	-9.3208
chr19	46392455	46392475	protein_coding	Psd	intron	ENSMUSG00000037126	NonProperStrand	1	chr11	69483136	69483186	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-inf
chr4	147999240	147999293	protein_coding	Tardbp	exon	ENSMUSG00000041459	ProperStrand	120	chr18	35716810	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-2.2029
chr4	116883488	116883565	snRNA	ENSMUSG00000070237_U5	.	ENSMUSG00000070237	ProperStrand	154	chr9	15119288	15119378	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-3.3313
chr2	69856510	69856560	protein_coding	Ubr3	exon	ENSMUSG00000044308	ProperStrand	62	chr18	35716843	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-3.8061
chr4	131364354	131364371	protein_coding	Ptpru	exon	ENSMUSG00000028909	ProperStrand	4	chr1	74415168	74415184	protein_coding	Gm216	exon	ENSMUSG00000073650	ProperStrand	33	1	-19.0852
chr5	115784318	115784335	protein_coding	Gatc	utr3	ENSMUSG00000029536	ProperStrand	1	chr11	97642977	97643041	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-inf
chr2	22444171	22445153	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	chr1	162967513	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	8	-3.3717
chr12	53100118	53100134	protein_coding	6530401N04Rik	utr3	ENSMUSG00000020956	ProperStrand	11	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-12.3898
chr9	59333970	59334095	protein_coding	Arih1	exon	ENSMUSG00000025234	ProperStrand	75	chr5	130300533	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.1352
chr9	107673007	107673024	protein_coding	Rbm5	intron	ENSMUSG00000032580	NonProperStrand	38	chr4	116828379	116828452	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-9.3004
chr11	23794837	23794854	antisense	Gm12061	.	ENSMUSG00000084769	ProperStrand	18	chr17	35089181	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	2	-12.6658
chr9	21817333	21817472	protein_coding	Prkcsh	exon	ENSMUSG00000003402	ProperStrand	58	chr5	75473198	75473215	protein_coding	Gsx2	utr3	ENSMUSG00000035946	ProperStrand	307	1	-10.1100
chr10	60025871	60025889	protein_coding	Cdh23	intron	ENSMUSG00000012819	NonProperStrand	13	chr4	117558946	117558963	protein_coding	Atp6v0b	exon	ENSMUSG00000033379	NonProperStrand	5	1	-21.0986
chr11	29633677	29633698	protein_coding	Rtn4	exon	ENSMUSG00000020458	ProperStrand	117	chr8	23908171	23908188	protein_coding	Ap3m2	intron	ENSMUSG00000031539	ProperStrand	15	1	-14.7974
chr19	44379265	44379350	protein_coding	Scd2	utr3	ENSMUSG00000025203	ProperStrand	219	chr3	108357404	108357450	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	2	-3.9302
chr11	120681185	120681227	protein_coding	Fasn	exon	ENSMUSG00000025153	ProperStrand	298	chr11	69481335	69481379	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-0.7552
chr18	82341664	82341754	LINE	L1_Mur2	L1	chr18L1_Mur282341565	NonProperStrand	1	chr18	82341344	82341424	LTR	MTE2b	MaLR	chr18MTE2b82341119	ProperStrand	1	1	-inf
chr19	27291761	27291777	protein_coding	Vldlr	utr5	ENSMUSG00000024924	NonProperStrand	36	chr18	52854063	52854080	protein_coding	Gykl1	exon	ENSMUSG00000053624	ProperStrand	18	1	-16.7641
chr8	97076416	97076506	protein_coding	Cpne2	intron	ENSMUSG00000034361	NonProperStrand	3	chr5	118039275	118039365	protein_coding	Ksr2	intron	ENSMUSG00000061578	NonProperStrand	15	1	-inf
chr15	81859662	81860024	protein_coding	Xrcc6	exon	ENSMUSG00000022471	ProperStrand	34	chr7	117189960	117190040	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.3973
chr16	16226283	16230747	protein_coding	Pkp2	exon	ENSMUSG00000041957	ProperStrand	19	chr16	23111486	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.1411
chr9	3416234	3416324	protein_coding	Cwf19l2	intron	ENSMUSG00000025898	ProperStrand	21	chr19	10664400	10664480	protein_coding	Cybasc3	intron	ENSMUSG00000034445	ProperStrand	11	1	-18.6542
chr15	37919085	37919242	protein_coding	Ubr5	exon	ENSMUSG00000037487	ProperStrand	258	chr11	98878344	98878370	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	3	-8.6491
chr5	108333692	108333740	protein_coding-noncoding	Rpl5	utr5	ENSMUSG00000058558	ProperStrand	5	chr18	73693124	73693148	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-10.6437
chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	chr7	107787828	107787903	protein_coding	Rab6a	utr3	ENSMUSG00000030704	ProperStrand	23	1	-11.2137
chr2	158203955	158204026	snoRNA	ENSMUSG00000065840_SNORA71	.	ENSMUSG00000065840	ProperStrand	107	chr12	106269311	106269401	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-3.0737
chr5	116063424	116063516	protein_coding	Gcn1l1	exon	ENSMUSG00000041638	ProperStrand	408	chr17	13112561	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	3	-3.8736
chr2	179914354	179914412	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr4	141034916	141035016	protein_coding	Spen	exon	ENSMUSG00000040761	ProperStrand	161	1	-7.7241
chr10	75322910	75322949	protein_coding	Mif	utr5	ENSMUSG00000033307	ProperStrand	146	chr10	41644312	41644329	protein_coding	Armc2	exon	ENSMUSG00000071324	ProperStrand	281	1	-8.4383
chr2	172189262	172189945	protein_coding	Aurka	exon	ENSMUSG00000027496	ProperStrand	31	chr4	131908686	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-4.0157
chr2	147011592	147011610	protein_coding	Nkx2-2	exon	ENSMUSG00000027434	ProperStrand	47	chr7	54102704	54102720	protein_coding	Ldha	exon	ENSMUSG00000063229	NonProperStrand	8	1	-18.0973
chr12	82046708	82046742	protein_coding	Srsf5	utr5	ENSMUSG00000021134	ProperStrand	68	chr10	80643793	80643893	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-5.8528
chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	chr6	70794803	70794819	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	1	-7.3285
chr12	99896648	99896743	protein_coding	Spata7	exon	ENSMUSG00000021007	ProperStrand	6	chr1	58533362	58537122	protein_coding	Orc2	exon	ENSMUSG00000026037	ProperStrand	20	4	-19.0755
chrX	10295872	10295972	protein_coding	Mid1ip1	utr3	ENSMUSG00000008035	ProperStrand	27	chr7	148634798	148634836	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-5.5287
chr5	54045983	54046054	protein_coding	Rbpj	utr3	ENSMUSG00000039191	ProperStrand	96	chr18	35714228	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-2.6048
chr16	84977574	84977590	protein_coding	App	intron	ENSMUSG00000022892	NonProperStrand	101	chrX	6061047	6061066	protein_coding	Shroom4	intron	ENSMUSG00000068270	ProperStrand	22	1	-14.3015
chr2	90235294	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	18393547	18393563	protein_coding	D10Bwg1379e	intron	ENSMUSG00000019852	NonProperStrand	120	3	-8.0037
chr15	31185058	31185075	protein_coding	Dap	intron	ENSMUSG00000039168	NonProperStrand	10	chr14	55710872	55710931	protein_coding	Zfhx2	utr5	ENSMUSG00000040721	ProperStrand	18	1	-19.1178
chr8	9988857	9988873	protein_coding	Abhd13	utr3	ENSMUSG00000040396	ProperStrand	7	chr6	71832629	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-9.9932
chr5	42136455	42136473	Low_complexity	GA-rich	Low_complexity	chr5GA-rich42136449	NonProperStrand	106	chr16	91630930	91631255	protein_coding	Gart	exon	ENSMUSG00000022962	ProperStrand	200	2	-15.3976
chr15	77597977	77597993	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr2	3328145	3328164	protein_coding	Meig1	intron	ENSMUSG00000026650	ProperStrand	18	1	-11.2478
chr4	153390063	153390116	protein_coding	Lrrc47	exon	ENSMUSG00000029028	ProperStrand	30	chr7	117190023	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.6386
chr17	15871320	15872669	protein_coding	Chd1	exon	ENSMUSG00000023852	ProperStrand	82	chr12	88778630	88778720	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-5.8821
chr18	32047756	32047846	protein_coding	Wdr33	exon	ENSMUSG00000024400	ProperStrand	48	chr1	155754999	155755079	protein_coding	Glul	exon	ENSMUSG00000026473	ProperStrand	54	1	-13.9783
chr5	125498078	125498115	protein_coding	Ncor2	utr3	ENSMUSG00000029478	ProperStrand	377	chr19	8800377	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	5	-4.9320
chr12	92811861	92811884	protein_coding	Gtf2a1	intron	ENSMUSG00000020962	ProperStrand	61	chr7	29136525	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.3370
chr9	64024786	64026075	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	chr9	120038603	120038674	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	7	-3.5887
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr8	96818793	96818810	protein_coding	Nup93	intron	ENSMUSG00000032939	ProperStrand	43	1	-9.3854
chr2	26494762	26494893	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr17	36005177	36005194	protein_coding	Ppp1r18	exon	ENSMUSG00000034595	NonProperStrand	17	1	-8.7294
chr9	48885743	48886310	protein_coding	Zw10	exon	ENSMUSG00000032264	ProperStrand	20	chr3	123210854	123210933	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-9.9593
chr2	4545523	4545541	protein_coding	Prpf18	exon	ENSMUSG00000039449	ProperStrand	16	chr9	15119300	15119402	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-7.7440
chr10	127522552	127522570	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr1	157444869	157444888	protein_coding	Acbd6	intron	ENSMUSG00000033701	NonProperStrand	4	1	-14.3432
chr7	148634720	148634820	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	chr8	113362433	113362486	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	1	-0.7655
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	1	-9.0485
chr17	85416241	85416289	protein_coding	Ppm1b	utr3	ENSMUSG00000061130	ProperStrand	36	chr5	130300417	130300507	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.4201
chr18	35716830	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	NonProperStrand	45	chr15	34370543	34370666	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	NonProperStrand	21	3	-20.1579
chr15	88994735	88994751	protein_coding	Plxnb2	exon	ENSMUSG00000036606	NonProperStrand	11	chr18	35714144	35714288	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	9	-20.1315
chr1	158552784	158555506	protein_coding	Abl2	exon	ENSMUSG00000026596	ProperStrand	37	chr16	23111394	23111474	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.9851
chr17	23040438	23040518	LINE	L1Md_F3	L1	chr17L1Md_F323038965	ProperStrand	1	chr17	13175482	13175572	protein_coding	Wtap	intron	ENSMUSG00000060475	ProperStrand	119	1	-inf
chr13	43291957	43291999	protein_coding	Gfod1	utr3	ENSMUSG00000051335	ProperStrand	37	chr4	131865381	131865471	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	3	-11.6915
chr2	57090809	57090826	protein_coding	Gpd2	utr5	ENSMUSG00000026827	ProperStrand	93	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-7.2854
chr2	76471660	76471676	protein_coding	Prkra	exon	ENSMUSG00000002731	NonProperStrand	65	chr13	97436581	97436634	protein_coding	Hmgcr	exon	ENSMUSG00000021670	ProperStrand	56	1	-13.2935
chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr16	87419194	87419275	snoRNA	ENSMUSG00000065647_SNORA2	.	ENSMUSG00000065647	ProperStrand	123	1	-2.0377
chr4	116364384	116364416	protein_coding	Prdx1	exon	ENSMUSG00000028691	ProperStrand	41	chr1	88247743	88247764	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-5.8421
chr17	35989680	35989731	protein_coding	Mdc1	exon	ENSMUSG00000061607	ProperStrand	85	chr5	130295415	130295505	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-4.5763
chr17	35972511	35972588	protein_coding	Tubb5	exon	ENSMUSG00000001525	ProperStrand	624	chr17	28467592	28467622	protein_coding	Rpl10a	exon	ENSMUSG00000037805	ProperStrand	121	3	-16.2254
chr4	46554809	46554826	protein_coding	Coro2a	exon	ENSMUSG00000028337	NonProperStrand	24	chr11	69481335	69481422	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-8.1853
chr1	87983864	87983894	protein_coding	Psmd1	intron	ENSMUSG00000026229	ProperStrand	664	chr12	21397014	21397078	protein_coding	Ywhaq	utr3	ENSMUSG00000076432	ProperStrand	70	2	-13.0634
chr4	32726959	32726985	protein_coding	Casp8ap2	exon	ENSMUSG00000028282	ProperStrand	7	chr2	79843543	79843559	protein_coding	Pde1a	intron	ENSMUSG00000059173	NonProperStrand	275	1	-14.6948
chr4	116300003	116300055	protein_coding	Nasp	utr5	ENSMUSG00000028693	ProperStrand	64	chr16	23111472	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-2.2756
chr9	14812090	14812180	protein_coding	Panx1	exon	ENSMUSG00000031934	ProperStrand	5	chr7	116664792	116664872	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-7.4478
chr15	54860093	54862629	protein_coding	Taf2	exon	ENSMUSG00000037343	ProperStrand	18	chr11	6428091	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	5	-19.8648
chr16	37882963	37882979	protein_coding	Lrrc58	utr3	ENSMUSG00000034158	NonProperStrand	45	chr5	108334193	108334330	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	6	-21.9831
chr10	125439489	125440032	protein_coding	Lrig3	exon	ENSMUSG00000020105	ProperStrand	40	chr2	89368463	89368480	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	2	-17.5048
chr3	101380238	101380328	protein_coding	Atp1a1	utr3	ENSMUSG00000033161	ProperStrand	316	chr1	159342949	159342965	protein_coding	2810025M15Rik	utr5	ENSMUSG00000049881	NonProperStrand	5	1	-15.1571
chr17	26684185	26684275	LTR	RLTR11A2	ERVK	chr17RLTR11A226684161	ProperStrand	1	chr17	26684080	26684160	LTR	RLTR15	ERVK	chr17RLTR1526684046	NonProperStrand	1	1	-inf
chr12	58643587	58643606	protein_coding	Foxa1	exon	ENSMUSG00000035451	ProperStrand	25	chr18	35714144	35714257	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	7	-inf
chr9	59408809	59409764	protein_coding	Hexa	exon	ENSMUSG00000025232	ProperStrand	12	chr7	29136561	29136641	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.3856
chr9	20700431	20700562	protein_coding	Eif3g	exon	ENSMUSG00000070319	ProperStrand	38	chr2	158205292	158205405	snoRNA	ENSMUSG00000064585_SNORA71	.	ENSMUSG00000064585	ProperStrand	418	1	-10.3462
chrX	148317042	148317116	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	chr7	120714878	120714978	protein_coding	Far1	utr3	ENSMUSG00000030759	ProperStrand	72	1	-8.6994
chr11	48647372	48647402	protein_coding	Trim7	intron	ENSMUSG00000040350	NonProperStrand	20	chr2	26494765	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.1919
chr2	90235303	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	42894035	42894051	protein_coding	Sobp	utr5	ENSMUSG00000038248	NonProperStrand	25	1	-6.1754
chr1	192712615	192712631	protein_coding	Rps6kc1	exon	ENSMUSG00000089872	ProperStrand	241	chr17	35089179	35089234	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	2	-4.9839
chr5	54389948	54389967	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	chr7	116664868	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-1.4948
chr2	25458046	25458075	protein_coding	B230208H17Rik	exon	ENSMUSG00000015087	ProperStrand	25	chr19	8963028	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.8447
chr4	131865863	131865953	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	NonProperStrand	39	chr16	87419201	87419281	snoRNA	ENSMUSG00000065647_SNORA2	.	ENSMUSG00000065647	NonProperStrand	2	2	-inf
chr10	127428422	127428438	protein_coding	Hsd17b6	exon	ENSMUSG00000025396	NonProperStrand	68	chr9	15119287	15119366	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-4.8665
chr2	26768247	26768719	protein_coding	Rpl7a	exon	ENSMUSG00000062647	ProperStrand	234	chr7	116663637	116663751	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-2.1681
chr6	53966309	53966325	LTR	MTEa	MaLR	chr6MTEa53966149	NonProperStrand	1	chr3	68889025	68889129	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-inf
chr9	95785883	95788527	protein_coding	Atr	exon	ENSMUSG00000032409	ProperStrand	44	chr18	75161534	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-7.8226
chr4	133801679	133801695	lincRNA	E130218I03Rik	exon	ENSMUSG00000086322	NonProperStrand	43	chr7	53089954	53089975	protein_coding	Grin2d	intron	ENSMUSG00000002771	NonProperStrand	31	1	-15.3105
chrX	17831785	17831835	protein_coding	Kdm6a	exon	ENSMUSG00000037369	ProperStrand	19	chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	1	-10.4352
chr8	27091218	27091234	protein_coding	4930444A02Rik	utr3	ENSMUSG00000037251	NonProperStrand	57	chr7	16524110	16524179	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	1	-9.8213
chr2	144079514	144080481	protein_coding	Snx5	exon	ENSMUSG00000027423	ProperStrand	64	chr9	78326654	78326778	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-6.2068
chr6	122692397	122692487	protein_coding	Slc2a3	utr5	ENSMUSG00000003153	ProperStrand	682	chr5	108334238	108336486	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-0.8006
chrX	19683228	19683244	protein_coding	Slc9a7	exon	ENSMUSG00000037341	NonProperStrand	136	chr5	54389948	54389964	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	1	-9.1413
chr4	126699300	126699321	protein_coding	Sfpq	exon	ENSMUSG00000028820	ProperStrand	340	chr18	35714148	35714238	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	5	-5.1943
chr16	57391685	57391760	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr4	130305592	130305620	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	NonProperStrand	1	1	-inf
chr8	77742558	77742574	protein_coding	Rasd2	exon	ENSMUSG00000034472	NonProperStrand	237	chr9	50816824	50816841	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	1	-9.0557
chr16	23111404	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	chr12	31943797	31943847	snoRNA	ENSMUSG00000065200_SNORA65	.	ENSMUSG00000065200	ProperStrand	19	1	-3.1411
chr9	63868722	63868739	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	chr13	90238585	90238699	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	2	-6.7483
chr18	36920982	36921014	protein_coding	Wdr55	intron	ENSMUSG00000042660	ProperStrand	5	chr16	23111373	23111463	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-19.1622
chr7	133250700	133252005	protein_coding	Xpo6	exon	ENSMUSG00000000131	ProperStrand	36	chr9	15119641	15119731	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.5483
chr18	85058614	85058694	LTR	MMETn-int	ERVK	chr18MMETn-int85058561	ProperStrand	1	chr18	85058748	85058838	LTR	MMETn-int	ERVK	chr18MMETn-int85058628	ProperStrand	1	1	-inf
chr11	55218704	55218738	protein_coding	Sparc	exon	ENSMUSG00000018593	ProperStrand	48	chr3	133151438	133151467	protein_coding	Tet2	exon	ENSMUSG00000040943	ProperStrand	192	2	-17.9490
chr19	5645530	5645546	protein_coding	Rela	exon	ENSMUSG00000024927	NonProperStrand	1	chr1	88247849	88247876	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-inf
chr7	117189990	117190025	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	chr6	38483967	38484004	tRNA	tRNA107-ArgCCT	.	1354579	ProperStrand	63	1	-3.2436
chr14	67684327	67684427	protein_coding	Ppp2r2a	intron	ENSMUSG00000022052	ProperStrand	45	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.8074
chr6	147540648	147555404	protein_coding	Ccdc91	exon	ENSMUSG00000030301	ProperStrand	15	chr16	23110911	23110991	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.0842
chr17	25296587	25296603	protein_coding	Clcn7	exon	ENSMUSG00000036636	ProperStrand	94	chr4	131908357	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-1.6966
chr2	158683479	158683504	protein_coding	Dhx35	utr3	ENSMUSG00000027655	ProperStrand	37	chr7	118219574	118219627	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	3	-12.0424
chr5	108336250	108336277	protein_coding	Rpl5	exon	ENSMUSG00000058558	ProperStrand	235	chr11	62416597	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	3	-6.8546
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	120434105	120434213	protein_coding	P4hb	utr5	ENSMUSG00000025130	ProperStrand	83	2	-6.4896
chr5	130339024	130339079	protein_coding	Sumf2	utr3	ENSMUSG00000025538	ProperStrand	20	chr4	131908685	131908744	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.0012
chr15	98382308	98382376	protein_coding	Ccnt1	intron	ENSMUSG00000011960	ProperStrand	14	chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	1	-11.7882
chr7	51097700	51097718	protein_coding	Klk5	exon	ENSMUSG00000074155	ProperStrand	29	chr5	130300477	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.8234
chr8	123105446	123111050	protein_coding	Gins2	utr3	ENSMUSG00000031821	ProperStrand	10	chr16	23110855	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-13.9486
chr16	16312967	16313050	protein_coding	Dnm1l	utr3	ENSMUSG00000022789	ProperStrand	29	chr10	127895539	127895568	tRNA	tRNA688-SerCGA	.	92571	ProperStrand	71	4	-inf
chr15	79908927	79909020	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	chr18	33954816	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	20	-3.1137
chr4	43505704	43505794	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr6	57638553	57638569	protein_coding	Pigy	utr3	ENSMUSG00000043162	NonProperStrand	18	1	-5.3613
chr1	23375437	23375453	protein_coding	Ogfrl1	utr3	ENSMUSG00000026158	NonProperStrand	1	chr2	158203956	158204013	snoRNA	ENSMUSG00000065840_SNORA71	.	ENSMUSG00000065840	ProperStrand	107	1	-inf
chr18	32405206	32405222	protein_coding	Ercc3	exon	ENSMUSG00000024382	ProperStrand	280	chr1	34876457	34876476	protein_coding	Fam168b	exon	ENSMUSG00000037503	ProperStrand	23	1	-12.1670
chr1	173433177	173433269	protein_coding	B930036N10Rik	utr3	ENSMUSG00000091993	ProperStrand	150	chr4	131908236	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	8	-7.3364
chr16	23111814	23111837	protein_coding	Eif4a2	intron	ENSMUSG00000022884	ProperStrand	356	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-3.7850
chr6	113068309	113069464	protein_coding	Setd5	exon	ENSMUSG00000034269	ProperStrand	162	chr6	71832552	71832642	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-3.7131
chr5	102088568	102088584	protein_coding	Nkx6-1	exon	ENSMUSG00000035187	ProperStrand	17	chr16	23110828	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.8783
chr14	77424372	77424388	protein_coding	9030625A04Rik	utr3	ENSMUSG00000044350	NonProperStrand	152	chr8	87501704	87501753	protein_coding	Junb	exon	ENSMUSG00000052837	ProperStrand	1	1	-inf
chr11	4820972	4820990	protein_coding	Thoc5	intron	ENSMUSG00000034274	ProperStrand	325	chr15	98350146	98350273	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-1.7588
chr9	34978825	34983360	protein_coding	Dcps	exon	ENSMUSG00000032040	ProperStrand	38	chr1	162966812	162966852	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-7.1668
chr5	123622050	123622066	protein_coding	Hpd	exon	ENSMUSG00000029445	ProperStrand	254	chr3	68889026	68889133	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-0.9780
chr11	98000681	98000759	protein_coding	Fbxl20	intron	ENSMUSG00000020883	ProperStrand	23	chr9	64024973	64024998	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	1	-11.0810
chr2	69193622	69193675	LINE	L1Md_F2	L1	chr2L1Md_F269191897	ProperStrand	54	chr10	79316213	79316230	lincRNA	E130317F20Rik	exon	ENSMUSG00000091994	NonProperStrand	97	1	-12.5616
chr7	88489430	88489446	protein_coding	Rps17	intron	ENSMUSG00000061787	ProperStrand	105	chr5	130295414	130295442	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-4.1748
chr10	75819868	75830111	protein_coding	Pcnt	exon	ENSMUSG00000001151	ProperStrand	127	chr9	20954239	20954303	protein_coding	Cdc37	utr5	ENSMUSG00000019471	ProperStrand	97	1	-10.8427
chr12	55797769	55797900	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	chr9	64024466	64024557	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	2	-5.0967
chr2	90235315	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr15	88695502	88695593	protein_coding	Pim3	utr3	ENSMUSG00000035828	ProperStrand	66	1	-4.2811
chr17	34020048	34020148	protein_coding	Kifc1	exon	ENSMUSG00000079553	ProperStrand	47	chr18	33954917	33954948	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-3.9604
chr1	136321483	136322522	protein_coding	Adipor1	exon	ENSMUSG00000026457	ProperStrand	48	chr16	23110855	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	8	-8.9501
chr4	53015201	53015217	SINE	B1F1	Alu	chr4B1F153015138	ProperStrand	102	chr2	130103751	130103808	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-7.4130
chr1	193822487	193822510	miRNA	Mir3473c	.	ENSMUSG00000093003	NonProperStrand	1	chr10	23505152	23505204	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-inf
chr18	77723132	77723149	protein_coding	Rnf165	exon	ENSMUSG00000025427	NonProperStrand	12	chr2	38589184	38589201	protein_coding	Nr6a1	intron	ENSMUSG00000063972	ProperStrand	52	1	-16.8756
chr2	35575912	35575930	protein_coding	Dab2ip	exon	ENSMUSG00000026883	NonProperStrand	58	chr15	10965488	10965504	protein_coding	Rxfp3	utr3	ENSMUSG00000060735	ProperStrand	37	1	-14.3604
chr3	95567688	95567706	protein_coding	Rprd2	exon	ENSMUSG00000028106	ProperStrand	12	chr11	69483162	69483270	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-5.4834
chr16	4707094	4707124	protein_coding	Dnaja3	utr3	ENSMUSG00000004069	ProperStrand	13	chr6	67222887	67227831	protein_coding	Serbp1	exon	ENSMUSG00000036371	ProperStrand	261	1	-13.4845
chr12	103305456	103305472	SINE	B4A	B4	chr12B4A103305441	NonProperStrand	1	chr15	34370551	34370651	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-inf
chr17	4996003	4996053	protein_coding	Arid1b	exon	ENSMUSG00000069729	ProperStrand	28	chr16	23110951	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.2442
chr14	48303882	48303900	protein_coding	Ktn1	intron	ENSMUSG00000021843	NonProperStrand	4	chr19	8963093	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-7.6308
chr19	16047863	16047897	protein_coding	Cep78	intron	ENSMUSG00000041491	ProperStrand	8	chr3	123210883	123210946	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-9.7482
chr5	73951279	73951298	protein_coding	Dcun1d4	utr3	ENSMUSG00000051674	ProperStrand	5	chr16	23110917	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr13	110693373	110693391	protein_coding	Pde4d	utr5	ENSMUSG00000021699	NonProperStrand	36	chr10	23505149	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-5.5683
chr2	54965336	54965352	protein_coding	Galnt13	exon	ENSMUSG00000060988	ProperStrand	45	chr5	92485086	92485183	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	1	-9.3173
chr2	30163201	30164777	protein_coding	Nup188	exon	ENSMUSG00000052533	ProperStrand	96	chr17	24857725	24857820	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	9	-17.7393
chr7	105274886	105277007	protein_coding	Capn5	exon	ENSMUSG00000035547	ProperStrand	99	chr11	69483136	69483190	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.6425
chr2	4544718	4544734	protein_coding	Prpf18	utr3	ENSMUSG00000039449	NonProperStrand	66	chr4	141696457	141696557	protein_coding	Kazn	utr3	ENSMUSG00000040606	ProperStrand	123	1	-11.6802
chr12	110888792	110888816	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr8	95370116	95370136	protein_coding	Mmp2	exon	ENSMUSG00000031740	ProperStrand	42	1	-9.3833
chr8	73419385	73419544	protein_coding	Rpl18a	exon	ENSMUSG00000045128	ProperStrand	394	chr19	8799022	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-2.3407
chr11	102468341	102468359	protein_coding	Fzd2	utr3	ENSMUSG00000050288	ProperStrand	15	chr1	72272832	72272922	snRNA	ENSMUSG00000075752_U2	.	ENSMUSG00000075752	ProperStrand	535	2	-19.1314
chr9	62687597	62687645	protein_coding	Cln6	intron	ENSMUSG00000032245	ProperStrand	34	chr2	158185530	158185630	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-7.6186
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr2	112202959	112202975	protein_coding	Slc12a6	utr3	ENSMUSG00000027130	NonProperStrand	72	1	-12.7863
chr11	75570362	75570413	protein_coding	Ywhae	exon	ENSMUSG00000020849	ProperStrand	176	chr14	31383224	31383265	protein_coding	Tkt	exon	ENSMUSG00000021957	ProperStrand	160	1	-9.1881
chr7	30231460	30233242	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	chr16	23111691	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	25	-18.8232
chr11	97889757	97890760	protein_coding	Rpl19	exon	ENSMUSG00000017404	ProperStrand	120	chr7	148634701	148634791	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-2.7264
chr5	30107917	30111706	protein_coding	Dnajb6	utr3	ENSMUSG00000029131	ProperStrand	81	chr16	23111694	23111814	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-2.7278
chr9	21393549	21393591	protein_coding	Carm1	utr3	ENSMUSG00000032185	ProperStrand	82	chr1	88247784	88247874	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-4.4956
chr3	146739892	146739908	Other	RMER1A	Other	chr3RMER1A146739600	ProperStrand	7	chr5	108336363	108336411	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-9.2393
chr4	107088415	107088480	protein_coding	Tmem48	utr3	ENSMUSG00000028614	ProperStrand	42	chr5	130300490	130300553	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.1385
chr16	84776142	84776209	protein_coding	Jam2	intron	ENSMUSG00000053062	ProperStrand	39	chr2	130101988	130102078	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-6.2038
chr7	88739004	88740826	protein_coding	Whamm	exon	ENSMUSG00000045795	ProperStrand	7	chr5	130300436	130300526	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-6.6707
chr10	116493187	116498423	protein_coding	Cct2	exon	ENSMUSG00000034024	ProperStrand	100	chr1	89673597	89673783	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	2	-4.1945
chr8	126554904	126555004	protein_coding	Urb2	exon	ENSMUSG00000031976	ProperStrand	64	chr16	23110464	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.3523
chr19	41634363	41634463	protein_coding	Lcor	utr3	ENSMUSG00000025019	ProperStrand	17	chr2	26494705	26494781	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	3	-13.0268
chr13	24923716	24923747	protein_coding	Tdp2	exon	ENSMUSG00000035958	ProperStrand	11	chr2	31358195	31358216	protein_coding	Ass1	intron	ENSMUSG00000076441	NonProperStrand	4	1	-20.1343
chr11	77317914	77317931	protein_coding	Git1	exon	ENSMUSG00000011877	ProperStrand	95	chr19	5603468	5603649	protein_coding	Kat5	utr3	ENSMUSG00000024926	ProperStrand	20	2	-20.7029
chr16	75761550	75765200	protein_coding	Hspa13	exon	ENSMUSG00000032932	NonProperStrand	57	chr16	23111373	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.3302
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr4	3762258	3762293	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	1	-5.0244
chr19	53388066	53388138	protein_coding	Mxi1	intron	ENSMUSG00000025025	ProperStrand	51	chr4	131908236	131908275	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.6592
chr12	82061475	82061491	protein_coding	Slc10a1	exon	ENSMUSG00000021135	NonProperStrand	1	chr12	110887828	110887859	snoRNA	ENSMUSG00000084549_SNORD113	.	ENSMUSG00000084549	ProperStrand	196	1	-inf
chr2	73654804	73654846	protein_coding	Atf2	utr3	ENSMUSG00000027104	ProperStrand	37	chr9	64022894	64022921	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-8.9962
chr10	80850485	80851035	protein_coding	Dohh	utr3	ENSMUSG00000078440	ProperStrand	26	chr4	131865878	131865988	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-11.0736
chr5	21189190	21189208	protein_coding	Napepld	exon	ENSMUSG00000044968	NonProperStrand	4	chr3	123210922	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-7.3786
chr4	53284216	53284333	Other	RMER1A	Other	chr4RMER1A53284240	ProperStrand	15	chr15	88848658	88848679	protein_coding	Mov10l1	exon	ENSMUSG00000015365	ProperStrand	22	1	-18.3168
chr2	167340808	167340855	protein_coding	Rnf114	utr3	ENSMUSG00000006418	ProperStrand	18	chr12	101129696	101129791	protein_coding	Tdp1	exon	ENSMUSG00000021177	ProperStrand	23	1	-17.3870
chr16	38191718	38194040	protein_coding	Gsk3b	exon	ENSMUSG00000022812	ProperStrand	80	chr6	35472752	35472770	protein_coding	Mtpn	exon	ENSMUSG00000029840	ProperStrand	18	1	-15.1757
chr18	30807774	30807864	LINE	Lx6	L1	chr18Lx630807776	ProperStrand	1	chr18	30808214	30808294	LTR	RMER6C	ERVK	chr18RMER6C30808072	NonProperStrand	1	1	-inf
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr14	63752220	63752256	protein_coding	Ctsb	exon	ENSMUSG00000021939	ProperStrand	48	1	-5.3885
chr11	20124489	20124676	protein_coding	Rab1	exon	ENSMUSG00000020149	ProperStrand	32	chr18	35716850	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-5.6246
chr5	103467607	103467624	protein_coding	Mapk10	exon	ENSMUSG00000046709	ProperStrand	18	chrX	71517821	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-8.9682
chr8	108534861	108534964	protein_coding	Ddx28	exon	ENSMUSG00000045538	ProperStrand	3	chr16	23110931	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-9.5778
chr16	18897826	18899472	protein_coding	Hira	exon	ENSMUSG00000022702	ProperStrand	28	chr16	20684338	20684385	snoRNA	ENSMUSG00000077239_Snord66	.	ENSMUSG00000077239	ProperStrand	159	2	-18.8729
chr6	112689098	112689322	protein_coding	Srgap3	exon	ENSMUSG00000030257	NonProperStrand	208	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-3.4717
chr4	124613619	124613637	protein_coding	Cdca8	exon	ENSMUSG00000028873	ProperStrand	41	chr4	131908356	131908418	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-3.6365
chr11	55268388	55274594	protein_coding	Atox1	exon	ENSMUSG00000018585	ProperStrand	15	chr8	73419683	73419711	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	5	-inf
chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	chr14	76247711	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-0.8456
chr1	106003776	106003866	LINE	Lx2A	L1	chr1Lx2A106002977	NonProperStrand	1	chr17	57957991	57958081	protein_coding	Cntnap5c	intron	ENSMUSG00000038048	ProperStrand	8	1	-inf
chr9	64906104	64906124	protein_coding	Dpp8	intron	ENSMUSG00000032393	ProperStrand	31	chr11	77995202	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-7.4982
chr11	75722451	75722513	protein_coding	Rph3al	exon	ENSMUSG00000020847	ProperStrand	5	chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	1	-14.9145
chr2	59146483	59146531	protein_coding	Pkp4	exon	ENSMUSG00000026991	ProperStrand	33	chr2	180510920	180510936	protein_coding	Bhlhe23	exon	ENSMUSG00000045493	NonProperStrand	28	1	-16.0365
chr18	10052133	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr16	33947905	33947921	protein_coding	Itgb5	exon	ENSMUSG00000022817	NonProperStrand	17	1	-11.3584
chr10	80645123	80645202	protein_coding	Eef2	utr3	ENSMUSG00000034994	ProperStrand	2244	chr10	41644311	41644329	protein_coding	Armc2	exon	ENSMUSG00000071324	ProperStrand	281	1	-3.1646
chr19	6317289	6317444	protein_coding	Cdc42bpg	exon	ENSMUSG00000024769	ProperStrand	90	chr11	68887029	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-3.3898
chr2	83564894	83646517	protein_coding	Itgav	exon	ENSMUSG00000027087	ProperStrand	59	chr16	23111374	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	6	-9.4498
chr10	123958751	123958767	SINE	B4A	B4	chr10B4A123958736	NonProperStrand	1	chr10	85370508	85370553	protein_coding	Prdm4	exon	ENSMUSG00000035529	ProperStrand	11	1	-inf
chr12	16780211	16780232	protein_coding	Greb1	intron	ENSMUSG00000036523	ProperStrand	7	chr12	112779155	112779255	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-9.1300
chr16	37882596	37882612	protein_coding	Lrrc58	utr3	ENSMUSG00000034158	NonProperStrand	45	chrX	34622978	34623025	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-3.6993
chr1	88247746	88247876	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	chr1	162968441	162968510	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	15	-11.1888
chr4	56910495	56910618	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	chr8	113362435	113362515	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	2	-4.1451
chrX	70934027	70934073	protein_coding	Bcap31	exon	ENSMUSG00000002015	ProperStrand	21	chr1	162968244	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-8.9275
chr6	128380382	128380444	protein_coding	Fkbp4	utr3	ENSMUSG00000030357	NonProperStrand	42	chr17	13112554	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	NonProperStrand	11	1	-17.4626
chr1	71637355	71695817	protein_coding	Fn1	intron	ENSMUSG00000026193	ProperStrand	931	chr1	162967489	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	6	-1.9811
chr6	148145307	148145384	protein_coding	Ergic2	intron	ENSMUSG00000030304	ProperStrand	10	chr5	130300436	130300532	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	6	-21.1937
chr2	26767785	26767832	protein_coding-noncoding	Rpl7a	utr5	ENSMUSG00000062647	ProperStrand	53	chr1	84782676	84790117	protein_coding	Trip12	exon	ENSMUSG00000026219	ProperStrand	248	1	-10.7177
chr9	15119287	15119408	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	chr11	97631139	97631177	tRNA	tRNA1444-CysGCA	.	1374213	ProperStrand	91	1	-4.3091
chr18	57705720	57705736	protein_coding	1700011I03Rik	intron	ENSMUSG00000058925	ProperStrand	7	chr15	34370589	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-7.8301
chr2	179322377	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr4	131908236	131908355	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	5	-2.9257
chr3	96218376	96218466	misc_RNA	Telomerase-vert	.	ENSMUSG00000064796	ProperStrand	443	chr14	31827478	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-3.1197
chr12	105582410	105582426	protein_coding	Serpina3k	exon	ENSMUSG00000058207	ProperStrand	14	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-10.6922
chr16	90386836	90386853	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	4	-5.9304
chr9	78023109	78023150	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr17	31983436	31983477	protein_coding	Sik1	exon	ENSMUSG00000024042	ProperStrand	55	4	-18.0351
chr7	87679949	87679965	protein_coding	Blm	utr5	ENSMUSG00000030528	NonProperStrand	19	chr8	87810303	87810403	protein_coding	Vps35	exon	ENSMUSG00000031696	ProperStrand	27	1	-17.2075
chr17	24665420	24665475	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	chr1	172975116	172975189	tRNA	tRNA699-GlyGCC	.	1341833	ProperStrand	660	1	-0.9118
chr5	149113021	149113038	protein_coding	Mtus2	exon	ENSMUSG00000029651	ProperStrand	114	chr4	131865855	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.8824
chr2	120834445	120834462	protein_coding	Ccndbp1	utr5	ENSMUSG00000023572	NonProperStrand	1	chr4	131865854	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr17	6945883	6946745	protein_coding	Ezr	exon	ENSMUSG00000052397	ProperStrand	126	chr5	108334195	108334275	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-3.4237
chr10	80674669	80675224	protein_coding	Atcay	exon	ENSMUSG00000034958	ProperStrand	94	chr2	130101984	130102056	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-4.4904
chr11	115041321	115041639	protein_coding	Slc9a3r1	exon	ENSMUSG00000020733	ProperStrand	7	chr4	134386613	134386634	protein_coding	Tmem57	exon	ENSMUSG00000028826	NonProperStrand	10	1	-19.7613
chr1	107743297	107743313	protein_coding	Tnfrsf11a	utr3	ENSMUSG00000026321	NonProperStrand	100	chr18	74938207	74938312	snoRNA	ENSMUSG00000089235_SCARNA17	.	ENSMUSG00000089235	ProperStrand	1128	3	-14.6925
chr6	15557858	15557948	LINE	L1VL2	L1	chr6L1VL215557532	ProperStrand	1	chr6	20129649	20129729	LINE	L1VL2	L1	chr6L1VL220129651	ProperStrand	1	1	-inf
chr17	23726917	23726938	protein_coding	Zfp13	intron	ENSMUSG00000062012	NonProperStrand	6	chr10	23505167	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-13.4142
chr2	31058555	31058574	protein_coding	Gpr107	intron	ENSMUSG00000000194	ProperStrand	99	chr5	76728832	76728848	protein_coding	Clock	intron	ENSMUSG00000029238	NonProperStrand	64	1	-12.1777
chr10	124668220	124668236	protein_coding	Slc16a7	exon	ENSMUSG00000020102	NonProperStrand	3	chr2	164951859	164951876	protein_coding	Cdh22	intron	ENSMUSG00000053166	ProperStrand	7	1	-inf
chr9	20695388	20695416	protein_coding	Ppan	exon	ENSMUSG00000004100	ProperStrand	65	chr17	56921722	56923074	protein_coding	Rfx2	exon	ENSMUSG00000024206	ProperStrand	32	1	-14.4205
chr13	120170584	120170620	protein_coding	Nnt	exon	ENSMUSG00000025453	ProperStrand	22	chr18	33954819	33954909	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-8.9430
chr5	118376503	118376519	protein_coding	Nos1	exon	ENSMUSG00000029361	NonProperStrand	237	chr12	110874225	110874287	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	1	-7.2368
chr13	40823795	40823812	protein_coding	Tfap2a	exon	ENSMUSG00000021359	ProperStrand	49	chr9	50816824	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	1	-12.2172
chr1	95304445	95304535	protein_coding	Hdlbp	utr3	ENSMUSG00000034088	ProperStrand	97	chr1	88247805	88247863	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	3	-10.0886
chr19	10555952	10555971	protein_coding	Ppp1r32	intron	ENSMUSG00000035179	ProperStrand	2	chr8	73419656	73419731	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-10.3981
chr2	32142052	32142123	protein_coding	Swi5	intron	ENSMUSG00000044627	ProperStrand	16	chr1	162968442	162968460	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	2	-13.9577
chr2	118538927	118538944	protein_coding	Plcb2	exon	ENSMUSG00000040061	ProperStrand	2	chr16	23110902	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr8	107871739	107871755	protein_coding	Fhod1	utr5	ENSMUSG00000014778	ProperStrand	64	chr2	26768049	26768119	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	1	-8.2644
chr9	46583003	46583083	DNA	Charlie4a	MER1_type	chr9Charlie4a46582632	ProperStrand	1	chr9	46583207	46583297	LINE	L2b	L2	chr9L2b46583132	ProperStrand	1	1	-inf
chr9	59333958	59334044	protein_coding	Arih1	exon	ENSMUSG00000025234	ProperStrand	75	chr19	11271200	11271217	protein_coding	Ms4a13	utr5	ENSMUSG00000057240	ProperStrand	59	1	-12.8986
chr17	56151721	56151743	protein_coding	Mpnd	exon	ENSMUSG00000003199	ProperStrand	71	chrX	7182489	7182506	protein_coding	Ccdc22	utr5	ENSMUSG00000031143	NonProperStrand	51	1	-13.3055
chr1	182689830	182689910	LINE	L1MD	L1	chr1L1MD182689774	ProperStrand	1	chr1	182689674	182689764	LINE	L1Md_F3	L1	chr1L1Md_F3182689388	ProperStrand	1	1	-inf
chr7	88314577	88314677	protein_coding	Slc28a1	utr3	ENSMUSG00000025726	ProperStrand	8	chr1	162965564	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-7.2483
chr13	95856366	95856384	protein_coding	Pde8b	intron	ENSMUSG00000021684	ProperStrand	43	chr9	15118322	15118359	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-4.0886
chr4	6410640	6410658	LINE	Lx	L1	chr4Lx6410547	ProperStrand	4	chr4	131908687	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-inf
chr15	29471226	29471243	LINE	Lx4B	L1	chr15Lx4B29471206	ProperStrand	16	chr9	59519493	59519736	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	1	-9.8503
chrX	20438033	20438097	protein_coding	Syn1	utr3	ENSMUSG00000037217	ProperStrand	9	chr9	15119724	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-6.2797
chr5	65986185	65986204	protein_coding	Ube2k	utr3	ENSMUSG00000029203	ProperStrand	289	chr17	13112530	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-1.7939
chr15	81152288	81152312	protein_coding	Slc25a17	intron	ENSMUSG00000022404	ProperStrand	38	chr18	35716811	35716883	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.9566
chr3	157729109	157729125	protein_coding	Lrrc40	exon	ENSMUSG00000063052	NonProperStrand	26	chr12	17552948	17552990	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-6.7405
chr17	32358980	32359035	protein_coding	Brd4	exon	ENSMUSG00000024002	ProperStrand	121	chr7	64845987	64846004	protein_coding	Gabrb3	exon	ENSMUSG00000033676	ProperStrand	16	2	-19.2112
chr17	66468411	66468427	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	chr11	6428060	6428169	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	4	-3.3293
chr4	57154472	57154489	protein_coding	Epb4.1l4b	intron	ENSMUSG00000028434	NonProperStrand	54	chr11	58115972	58116007	tRNA	tRNA1911-LeuCAA	.	1907081	ProperStrand	165	1	-11.4956
chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr11	120148960	120148976	protein_coding	Bahcc1	exon	ENSMUSG00000039741	NonProperStrand	268	3	-8.8323
chr10	125446989	125447051	protein_coding	Lrig3	exon	ENSMUSG00000020105	ProperStrand	40	chr7	52382753	52382790	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	4	-19.3689
chr13	9833572	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr7	126864070	126864170	protein_coding	Thumpd1	exon	ENSMUSG00000030942	ProperStrand	14	1	-7.8589
chr8	124409821	124410195	protein_coding	Slc7a5	exon	ENSMUSG00000040010	ProperStrand	166	chr9	15118322	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	5	-8.9348
chr17	69737986	69738002	protein_coding	Zfp161	utr3	ENSMUSG00000049672	NonProperStrand	45	chr12	106269284	106269384	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-4.6898
chrX	147523963	147524055	protein_coding	Fgd1	utr3	ENSMUSG00000025265	ProperStrand	96	chr9	15118327	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-2.6272
chr3	19117385	19118202	protein_coding	Mtfr1	exon	ENSMUSG00000027601	ProperStrand	13	chr1	136817058	136817075	protein_coding	Ppp1r12b	intron	ENSMUSG00000073557	ProperStrand	21	2	-inf
chr8	3603854	3603894	protein_coding	Camsap3	exon	ENSMUSG00000044433	ProperStrand	86	chr5	92485127	92485217	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	1	-8.0194
chr2	90235292	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	145626121	145626197	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	3	-2.6972
chr10	23505559	23505626	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	2	-1.1596
chr2	90235314	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	178156702	178156718	protein_coding	9030418K01Rik	utr3	ENSMUSG00000070476	NonProperStrand	1	1	-inf
mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr4	117811168	117811476	protein_coding	Kdm4a	exon	ENSMUSG00000033326	ProperStrand	81	1	-5.3167
chr3	130432052	130432157	protein_coding	Rpl34	exon	ENSMUSG00000062006	ProperStrand	51	chr4	131866155	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-6.6831
chr3	88383832	88383932	protein_coding	Ssr2	exon	ENSMUSG00000041355	ProperStrand	22	chrX	34622906	34622936	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-5.0729
chr11	7067186	7069426	protein_coding	Adcy1	exon	ENSMUSG00000020431	ProperStrand	183	chr18	73693113	73693139	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-3.4073
chr2	158185576	158185655	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr14	31827478	31827549	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	3	-2.9704
chr16	33947905	33947921	protein_coding	Itgb5	exon	ENSMUSG00000022817	NonProperStrand	17	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.9909
chrX	7419058	7419148	protein_coding	Otud5	utr5	ENSMUSG00000031154	ProperStrand	79	chr9	15119696	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-3.8788
chr10	59765631	59765648	protein_coding	Cdh23	utr3	ENSMUSG00000012819	ProperStrand	16	chr3	68889026	68889126	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-5.7992
chr2	90235298	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	130880121	130880139	protein_coding	Caln1	intron	ENSMUSG00000060371	ProperStrand	32	1	-5.6851
chr7	129304162	129304194	protein_coding	Plk1	exon	ENSMUSG00000030867	ProperStrand	146	chr10	90432673	90432690	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	2	-14.0187
chr1	145971868	145971889	LINE	L2	L2	chr1L2145971861	NonProperStrand	49	chr8	13416897	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-6.8561
chr4	137107804	137108072	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	chr11	97490840	97490915	protein_coding	E130012A19Rik	utr5	ENSMUSG00000043439	ProperStrand	83	1	-7.4571
chr11	113203451	113203489	protein_coding	Slc39a11	intron	ENSMUSG00000041654	ProperStrand	25	chr15	82980134	82980190	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-8.8985
chr4	131908688	131908772	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	chr8	125626932	125626980	snoRNA	ENSMUSG00000064450_Snord68	.	ENSMUSG00000064450	ProperStrand	181	3	-0.8884
chr4	43505743	43505823	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr12	32025731	32025821	protein_coding	Dld	exon	ENSMUSG00000020664	ProperStrand	4	1	-8.5468
chr1	183107578	183107643	protein_coding	Wdr26	utr3	ENSMUSG00000038733	ProperStrand	9	chr9	120037971	120038048	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-8.5211
chr13	57913652	57913671	protein_coding	Spock1	intron	ENSMUSG00000056222	ProperStrand	14	chr9	120038589	120038613	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.8314
chr5	108330906	108334347	protein_coding	Rpl5	intron	ENSMUSG00000058558	ProperStrand	235	chr18	75161109	75161173	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	7	-19.6706
chr7	116664803	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	chr2	144091716	144091809	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	ProperStrand	549	5	-1.3856
chr10	7675761	7675777	protein_coding	Tab2	utr5	ENSMUSG00000015755	NonProperStrand	9	chr10	23505152	23505266	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-7.7215
chr6	8598388	8598457	protein_coding	Ica1	intron	ENSMUSG00000062995	ProperStrand	13	chr8	129468746	129468799	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-7.4499
chr16	56769126	56769145	protein_coding	Gpr128	intron	ENSMUSG00000022755	NonProperStrand	1	chr4	116827263	116827391	protein_coding	Rps8	exon	ENSMUSG00000047675	NonProperStrand	1	1	-inf
chr2	30679099	30679150	protein_coding	Asb6	utr3	ENSMUSG00000039483	ProperStrand	8	chr10	23505180	23505270	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.7871
mmu-miR-3472	0	18	miRNA	mmu-miR-3472	.	mmu-miR-3472	ProperStrand	1	chr10	116793720	116793738	protein_coding	Cpsf6	intron	ENSMUSG00000055531	ProperStrand	86	1	-inf
chr2	24825186	24827046	protein_coding	Wdr85	exon	ENSMUSG00000026975	ProperStrand	323	chr5	108336363	108336409	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-1.8660
chr18	82662186	82662202	protein_coding	Mbp	intron	ENSMUSG00000041607	NonProperStrand	185	chr2	26493410	26493499	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-1.7949
chr7	88529496	88529520	protein_coding	Cpeb1	intron	ENSMUSG00000025586	NonProperStrand	29	chr5	101108852	101108869	protein_coding	Hpse	utr3	ENSMUSG00000035273	NonProperStrand	18	1	-17.0961
chr1	55134765	55134789	protein_coding	Hspd1	utr3	ENSMUSG00000025980	ProperStrand	140	chr4	131865876	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.3787
chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	chr10	127521220	127521271	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	1	-5.5955
chr2	169935183	169935283	protein_coding	Zfp217	utr3	ENSMUSG00000052056	ProperStrand	79	chr16	23111740	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	15	-20.3987
chr14	32004609	32004670	protein_coding	Nisch	utr5	ENSMUSG00000021910	ProperStrand	125	chr12	70259704	70260030	protein_coding	Rps29	exon	ENSMUSG00000034892	ProperStrand	124	2	-16.3330
chr17	24857625	24857672	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr9	39358287	39358304	protein_coding	Olfr958	exon	ENSMUSG00000050853	NonProperStrand	266	1	-6.6878
chr7	112759642	112759864	protein_coding	Trim3	exon	ENSMUSG00000036989	ProperStrand	11	chr4	131865455	131865515	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-7.3625
chr1	192623761	192623796	protein_coding	Rps6kc1	exon	ENSMUSG00000089872	ProperStrand	241	chr9	120037979	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-2.1893
chr9	78328154	78328331	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr1	173206879	173206932	protein_coding	B4galt3	utr3	ENSMUSG00000052423	ProperStrand	14	1	-9.2710
chr16	20543493	20543583	protein_coding	Ap2m1	utr3	ENSMUSG00000022841	ProperStrand	23	chr3	123210892	123210972	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.7662
chr2	167836657	167836685	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	chr17	23806251	23806498	protein_coding	Thoc6	exon	ENSMUSG00000041319	ProperStrand	16	3	-19.9323
chr8	35305116	35305135	SINE	RSINE1	B4	chr8RSINE135305062	ProperStrand	10	chr11	106362304	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-9.4709
chr5	103952637	103952653	protein_coding	Ptpn13	exon	ENSMUSG00000034573	ProperStrand	23	chr11	6428104	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.0081
chr1	84740565	84741271	protein_coding	Trip12	exon	ENSMUSG00000026219	ProperStrand	248	chr3	88659566	88659776	protein_coding	Gon4l	exon	ENSMUSG00000054199	ProperStrand	1260	9	-18.5943
chrX	7246587	7246677	protein_coding-noncoding	Plp2	utr3	ENSMUSG00000031146	ProperStrand	2	chr16	11227967	11228047	protein_coding	Gspt1	intron	ENSMUSG00000062203	ProperStrand	49	1	-inf
chr14	32524126	32524280	protein_coding	Ankrd28	exon	ENSMUSG00000014496	ProperStrand	39	chr18	35714171	35714261	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	12	-20.1888
chr15	25914558	25914582	protein_coding	Zfp622	exon	ENSMUSG00000052253	ProperStrand	7	chr18	35714144	35714262	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-7.7147
chr12	77200288	77200304	protein_coding	Syne2	exon	ENSMUSG00000063450	ProperStrand	63	chr5	108336363	108336409	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-4.7868
chr19	7030306	7030326	protein_coding	Plcb3	exon	ENSMUSG00000024960	ProperStrand	111	chr15	79913288	79913352	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.4954
chr7	152047658	152049482	protein_coding	Fgf4	exon	ENSMUSG00000050917	ProperStrand	66	chr16	23110851	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-2.0060
chr2	90235295	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	4	-4.8331
chr11	69821813	69821897	protein_coding	Dvl2	exon	ENSMUSG00000020888	ProperStrand	94	chr4	131865913	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	6	-8.6228
chr4	140879401	140879447	protein_coding	Epha2	exon	ENSMUSG00000006445	ProperStrand	148	chr1	88247743	88247799	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-3.3925
chr10	12125718	12125772	protein_coding	Utrn	exon	ENSMUSG00000019820	ProperStrand	69	chr11	97642952	97643051	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.2363
chr12	114154102	114154151	protein_coding	Jag2	exon	ENSMUSG00000002799	ProperStrand	28	chr5	54047560	54047630	protein_coding	Rbpj	utr3	ENSMUSG00000039191	ProperStrand	96	5	-19.3451
chr7	107232127	107232167	protein_coding	Pold3	utr3	ENSMUSG00000030726	ProperStrand	14	chr7	117189944	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	5	-inf
chr1	196497444	196497534	protein_coding	Plxna2	intron	ENSMUSG00000026640	NonProperStrand	17	chr1	196510147	196510227	protein_coding	Plxna2	intron	ENSMUSG00000026640	ProperStrand	6	1	-20.8723
chr6	34737427	34737517	protein_coding	Agbl3	intron	ENSMUSG00000038836	ProperStrand	3	chr2	26768262	26768538	protein_coding	Rpl7a	exon	ENSMUSG00000062647	ProperStrand	234	1	-17.0827
chr10	90516022	90516083	protein_coding	Apaf1	intron	ENSMUSG00000019979	ProperStrand	27	chr11	6428121	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.6948
chr9	71331443	71331468	protein_coding	Polr2m	exon	ENSMUSG00000032199	ProperStrand	83	chr17	34741917	34741934	protein_coding	Agpat1	intron	ENSMUSG00000034254	ProperStrand	28	1	-14.1980
chr5	125868535	125870280	protein_coding	Ubc	utr5	ENSMUSG00000008348	ProperStrand	13	chr15	5068445	5068480	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-9.1525
chr14	55236662	55236724	protein_coding	Psmb5	utr5	ENSMUSG00000022193	ProperStrand	14	chr12	114026720	114026737	protein_coding	Ahnak2	intron	ENSMUSG00000072812	NonProperStrand	3	1	-inf
chr2	129998643	129998705	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr7	148716144	148718720	protein_coding	Chid1	exon	ENSMUSG00000025512	ProperStrand	4	1	-13.7857
chr2	73434618	73434634	antisense	Gm13704	.	ENSMUSG00000086544	NonProperStrand	53	chr17	24858080	24858120	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	1	-9.9025
chr2	165668371	165671605	protein_coding	Zmynd8	exon	ENSMUSG00000039671	ProperStrand	81	chr5	130300436	130300516	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.0102
chr11	78313939	78313956	protein_coding	Vtn	exon	ENSMUSG00000017344	ProperStrand	188	chr9	30965365	30965408	protein_coding	Aplp2	exon	ENSMUSG00000031996	ProperStrand	172	1	-8.9121
chr3	33713610	33713626	protein_coding	Ccdc39	exon	ENSMUSG00000027676	ProperStrand	106	chr19	8963118	8963165	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.3898
chr10	89512698	89512714	protein_coding	Anks1b	exon	ENSMUSG00000058589	ProperStrand	68	chr16	23111448	23111494	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.0916
chr7	133638772	133638952	protein_coding	Atxn2l	exon	ENSMUSG00000032637	ProperStrand	219	chr9	120039547	120039627	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.2135
chrX	166425587	166425677	protein_coding	Mid1	exon	ENSMUSG00000035299	ProperStrand	209	chr18	73693109	73693130	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	2	-5.4314
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr9	51893341	51893379	protein_coding	Rdx	exon	ENSMUSG00000032050	ProperStrand	60	1	-7.9744
chr9	56266647	56266665	protein_coding	Hmg20a	utr5	ENSMUSG00000032329	ProperStrand	87	chr4	56910515	56910617	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-5.3790
chr18	36144634	36144670	protein_coding	Psd2	intron	ENSMUSG00000024347	ProperStrand	7	chr16	23110455	23110553	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-6.6152
chr2	66385173	66385189	protein_coding	Scn9a	exon	ENSMUSG00000075316	ProperStrand	58	chr12	17553062	17553090	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-5.1550
chr6	85418108	85418184	protein_coding	Cct7	exon	ENSMUSG00000030007	ProperStrand	173	chr16	23110457	23110557	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-0.8941
chr6	120882003	120882074	protein_coding	Mical3	utr3	ENSMUSG00000051586	ProperStrand	104	chr18	35714175	35714265	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-2.4678
chr17	36065505	36065631	protein_coding	Ppp1r10	exon	ENSMUSG00000039220	ProperStrand	45	chr7	117190018	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.8650
chr9	15119967	15120030	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	chr11	97642952	97643090	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	16	-3.5954
chr4	52470199	52470215	protein_coding	Smc2	exon	ENSMUSG00000028312	ProperStrand	50	chr5	23258124	23258187	protein_coding	Pus7	exon	ENSMUSG00000057541	ProperStrand	23	1	-15.5982
chr1	136225761	136225778	protein_coding	Ppfia4	exon	ENSMUSG00000026458	ProperStrand	45	chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	1	-9.7664
chr4	43505656	43505797	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr15	43699137	43699153	protein_coding	Tmem74	exon	ENSMUSG00000054409	ProperStrand	5	1	-8.0398
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr6	108355330	108355353	protein_coding	Itpr1	intron	ENSMUSG00000030102	NonProperStrand	15	1	-9.7267
chr7	151664034	151664125	protein_coding	Ppfia1	intron	ENSMUSG00000037519	ProperStrand	32	chr7	118219574	118219634	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-5.3847
chr10	62463028	62463118	protein_coding	Rufy2	exon	ENSMUSG00000020070	ProperStrand	5	chr3	123210899	123210979	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-6.8746
chr16	45095879	45095895	protein_coding	Ccdc80	exon	ENSMUSG00000022665	ProperStrand	15	chr8	26827323	26827340	protein_coding	Whsc1l1	utr3	ENSMUSG00000054823	NonProperStrand	17	1	-19.0158
chr17	4082233	4082279	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr13	69085444	69085462	protein_coding	Adcy2	intron	ENSMUSG00000021536	NonProperStrand	16	1	-12.6511
chr9	44143712	44143728	protein_coding	H2afx	utr3	ENSMUSG00000049932	ProperStrand	137	chr14	61398407	61398423	protein_coding	C1qtnf9	exon	ENSMUSG00000071347	ProperStrand	187	1	-9.3771
chrX	11635848	11635865	protein_coding	Bcor	exon	ENSMUSG00000040363	NonProperStrand	293	chr9	40612829	40612920	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	1	-6.3899
chr15	101121214	101121314	protein_coding	9430023L20Rik	utr3	ENSMUSG00000037204	ProperStrand	11	chr9	15119736	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.8656
chr10	80102353	80102391	protein_coding	Csnk1g2	exon	ENSMUSG00000003345	ProperStrand	28	chr17	35087897	35087946	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-6.7052
chr8	107794712	107794795	protein_coding	Hsf4	exon	ENSMUSG00000033249	NonProperStrand	2	chrX	73828497	73828513	protein_coding	4930468A15Rik	exon	ENSMUSG00000079525	NonProperStrand	1	1	-inf
chr9	3338556	3343030	protein_coding	Alkbh8	exon	ENSMUSG00000025899	ProperStrand	7	chr8	113447146	113447168	protein_coding	St3gal2	intron	ENSMUSG00000031749	ProperStrand	206	2	-inf
chr7	52378459	52378481	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	chr11	69482353	69482405	snoRNA	ENSMUSG00000089542_snoU6-77	.	ENSMUSG00000089542	ProperStrand	138	1	-6.8465
chr6	134670564	134670608	protein_coding	Dusp16	exon	ENSMUSG00000030203	ProperStrand	27	chr4	131908806	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-11.8290
chr5	108336363	108336406	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	chr4	3762227	3762291	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	4	-6.1978
chr18	10052128	10052151	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr14	76815720	76815817	protein_coding	Tsc22d1	utr5	ENSMUSG00000022010	ProperStrand	86	1	-8.0809
chr5	122580412	122584741	protein_coding	Ccdc63	utr5	ENSMUSG00000043036	ProperStrand	120	chr14	52829547	52829570	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-6.8232
chr16	3862712	3862729	protein_coding	Zfp597	utr3	ENSMUSG00000039789	ProperStrand	5	chr10	23505259	23505282	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-5.7809
chr9	78326901	78326926	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr11	83107840	83107902	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	1	-2.1774
chr2	157709919	157710166	protein_coding	Ctnnbl1	exon	ENSMUSG00000027649	ProperStrand	26	chr16	23111689	23111769	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.3497
chr12	119177214	119177231	protein_coding	Dnahc11	intron	ENSMUSG00000018581	ProperStrand	65	chrX	34622935	34622958	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-3.0272
chr7	3233990	3234008	protein_coding	Nlrp12	exon	ENSMUSG00000078817	NonProperStrand	1	chr7	118219597	118219641	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-inf
chr16	38445571	38445671	protein_coding	Adprh	utr3	ENSMUSG00000002844	ProperStrand	30	chr16	23111434	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-4.1722
chr15	78597320	78597591	protein_coding	Mfng	exon	ENSMUSG00000018169	ProperStrand	5	chr16	23111452	23111503	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-5.8178
chr17	46157771	46157821	protein_coding	Vegfa	intron	ENSMUSG00000023951	ProperStrand	43	chr10	23505205	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-4.9273
chr9	21397009	21397090	protein_coding	Yipf2	utr5	ENSMUSG00000032182	NonProperStrand	1	chr4	131908267	131908357	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-inf
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr18	38116113	38116129	protein_coding	Rell2	exon	ENSMUSG00000044024	NonProperStrand	43	1	-10.0399
chr11	88581299	88581389	lincRNA	C030037D09Rik	exon	ENSMUSG00000087574	ProperStrand	8	chr11	97643007	97643087	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-6.3446
chr16	70537136	70537153	protein_coding	Gbe1	intron	ENSMUSG00000022707	NonProperStrand	17	chr17	27559700	27559717	protein_coding	Grm4	utr3	ENSMUSG00000063239	ProperStrand	147	1	-14.0794
chr7	3157926	3159161	protein_coding	AU018091	exon	ENSMUSG00000054753	ProperStrand	42	chr16	23111756	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	10	-20.2715
chr18	37153115	37153132	protein_coding	Pcdha4	intron	ENSMUSG00000007440	NonProperStrand	11	chr16	23111440	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-7.1274
chr6	51414446	51414463	protein_coding	Hnrnpa2b1	exon	ENSMUSG00000004980	ProperStrand	166	chr13	49218439	49218455	protein_coding	Wnk2	intron	ENSMUSG00000037989	NonProperStrand	67	1	-11.0493
chr16	13827493	13827542	protein_coding	Ntan1	exon	ENSMUSG00000022681	ProperStrand	2	chr11	69483194	69483234	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-9.6187
chr10	80992808	80992898	protein_coding	Gna11	utr3	ENSMUSG00000034781	ProperStrand	23	chr19	8963042	8963122	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.0031
chr17	95160908	95218243	protein_coding	2610044O15Rik	exon	ENSMUSG00000066057	NonProperStrand	70	chr4	116828379	116828431	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-8.0740
chr2	90235294	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	100843899	100843950	protein_coding	Jak1	exon	ENSMUSG00000028530	ProperStrand	30	1	-5.8128
chr2	150789175	150789913	protein_coding	Ninl	exon	ENSMUSG00000068115	ProperStrand	51	chr9	15119731	15119763	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.9150
chr8	111316125	111316186	protein_coding	Zfhx3	utr5	ENSMUSG00000038872	ProperStrand	65	chr7	116663681	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.3755
chr14	61648824	61648841	protein_coding	Tnfrsf19	intron	ENSMUSG00000060548	ProperStrand	34	chr19	8800418	8800438	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-4.6034
chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr18	82662186	82662202	protein_coding	Mbp	intron	ENSMUSG00000041607	NonProperStrand	185	1	-4.2700
chr6	146261384	146261401	protein_coding	Itpr2	exon	ENSMUSG00000030287	NonProperStrand	42	chr11	62416951	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-6.7496
chr19	37514362	37514378	protein_coding	Hhex	utr3	ENSMUSG00000024986	NonProperStrand	5	chr9	15119643	15119734	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-7.5411
chr10	127956023	127956240	protein_coding	Esyt1	exon	ENSMUSG00000025366	ProperStrand	31	chr11	68886930	68887010	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	8	-19.0934
chr18	57400307	57400324	protein_coding	Megf10	exon	ENSMUSG00000024593	ProperStrand	143	chr5	108334195	108334257	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-3.1942
chr18	60846045	60846105	protein_coding	Ndst1	utr3	ENSMUSG00000054008	ProperStrand	38	chr4	131908236	131908288	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.1259
chr13	28653437	28700391	lincRNA	2610307P16Rik	exon	ENSMUSG00000085936	ProperStrand	154	chr7	52382237	52382314	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-6.4117
chr4	11097776	11097802	protein_coding	Trp53inp1	utr3	ENSMUSG00000028211	ProperStrand	35	chr7	117190025	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.3417
chr16	84816553	84821523	protein_coding	Jam2	exon	ENSMUSG00000053062	ProperStrand	39	chr11	69483136	69483194	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.2098
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr1	72895674	72896251	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	2	-7.0693
chr2	129026277	129036763	protein_coding	Slc20a1	utr3	ENSMUSG00000027397	ProperStrand	81	chr10	23505152	23505284	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-5.6887
chr11	102294590	102294607	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr4	122968594	122968678	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-2.1800
chr9	109779715	109781758	protein_coding	Cdc25a	exon	ENSMUSG00000032477	ProperStrand	27	chr18	35714148	35714228	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.9601
chr8	113680396	113680473	protein_coding	Glg1	utr3	ENSMUSG00000003316	ProperStrand	83	chr19	41843186	41843218	protein_coding	Arhgap19	utr3	ENSMUSG00000025154	ProperStrand	34	2	-19.2582
chr12	110141423	110141468	protein_coding	Wdr25	intron	ENSMUSG00000040877	ProperStrand	14	chr9	120039568	120039625	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-10.0547
chr1	165983749	165983765	protein_coding	Sele	exon	ENSMUSG00000026582	NonProperStrand	31	chr8	13171251	13171348	protein_coding	Lamp1	exon	ENSMUSG00000031447	ProperStrand	92	1	-13.7884
chr10	81056886	81056902	protein_coding	Tle6	exon	ENSMUSG00000034758	ProperStrand	10	chr16	23111770	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.2069
chr15	31524241	31525549	protein_coding	Cct5	exon	ENSMUSG00000022234	ProperStrand	116	chr7	116664797	116664895	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-2.7984
chr4	141032366	141032456	protein_coding	Spen	exon	ENSMUSG00000040761	ProperStrand	161	chr4	131866162	131866242	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-1.9472
chr9	102622956	102623034	protein_coding	Amotl2	exon	ENSMUSG00000032531	ProperStrand	54	chr17	24856620	24856670	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	6	-21.6212
chr10	122702078	122702094	protein_coding	Fam19a2	utr5	ENSMUSG00000044071	NonProperStrand	52	chr5	116011429	116011450	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	1	-10.4368
chr16	68981485	68981506	LTR	MTC	MaLR	chr16MTC68981436	NonProperStrand	3	chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	3	-inf
chr7	107126106	107126196	protein_coding	Rnf169	intron	ENSMUSG00000058761	ProperStrand	31	chr7	116663694	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.7004
chr4	131908357	131908914	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr9	120038480	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	12	-3.4084
chr5	115939528	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr5	130295452	130295542	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	5	-5.0227
mmu-miR-6240	3	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr8	124017916	124017933	protein_coding	Gm20388	intron	ENSMUSG00000092329	ProperStrand	295	1	-2.9005
chr10	128257530	128257546	protein_coding	Ormdl2	utr5	ENSMUSG00000025353	ProperStrand	51	chr11	6428077	6428157	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.4890
chr6	101485357	101485378	LTR	MTEa	MaLR	chr6MTEa101485361	ProperStrand	45	chr15	98356870	98356913	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	1	-8.3299
chr5	122909483	122909502	protein_coding	Atp2a2	exon	ENSMUSG00000029467	ProperStrand	166	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.5044
chr15	77593389	77593411	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr4	56910570	56910629	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-1.9671
chr4	43182945	43183004	protein_coding-noncoding	Unc13b	utr5	ENSMUSG00000028456	ProperStrand	3	chr18	78021584	78021602	protein_coding	Atp5a1	utr3	ENSMUSG00000025428	ProperStrand	254	2	-20.1088
chr1	102076735	102076794	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	chr2	130102020	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	2	-3.3758
chr12	33505268	33505307	protein_coding	Nampt	utr5	ENSMUSG00000020572	NonProperStrand	2	chr16	57391525	57391773	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	1	-17.8932
chr15	99869259	99869307	protein_coding	Dip2b	exon	ENSMUSG00000023026	ProperStrand	48	chr1	182097576	182098457	protein_coding	Adck3	exon	ENSMUSG00000026489	ProperStrand	17	1	-16.3172
chr9	40613096	40613186	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr11	83107816	83107896	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	2	-6.3775
chr11	5695456	5695522	protein_coding	Dbnl	exon	ENSMUSG00000020476	ProperStrand	16	chr8	13416895	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	2	-14.5214
chr17	25041749	25041852	protein_coding	Mapk8ip3	exon	ENSMUSG00000024163	NonProperStrand	6	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-7.8657
chr8	123105565	123105644	protein_coding	Gins2	utr3	ENSMUSG00000031821	ProperStrand	10	chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	2	-17.9479
chr16	96391542	96391613	protein_coding	Lca5l	intron	ENSMUSG00000045275	NonProperStrand	210	chr8	129468746	129468822	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	8	-18.3277
chr18	20601115	20601139	protein_coding	Dsg4	intron	ENSMUSG00000001804	NonProperStrand	13	chr2	164256170	164256270	protein_coding	Sdc4	intron	ENSMUSG00000017009	ProperStrand	177	1	-14.2664
chr16	38529540	38529567	protein_coding	Poglut1	exon	ENSMUSG00000034064	ProperStrand	8	chr8	73033212	73033230	protein_coding	2810422J05Rik	exon	ENSMUSG00000055553	ProperStrand	171	1	-15.3343
chr2	162915296	162915315	LTR	RLTR11B	ERVK	chr2RLTR11B162915116	ProperStrand	29	mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	1	-7.3498
chr16	87484234	87491650	protein_coding	Cct8	exon	ENSMUSG00000025613	ProperStrand	65	chr16	23111373	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	9	-15.3796
chr12	111891536	111891626	protein_coding	Dync1h1	intron	ENSMUSG00000018707	ProperStrand	648	chr2	158182201	158182281	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-0.9730
chr5	136206160	136206193	protein_coding	Por	exon	ENSMUSG00000005514	ProperStrand	42	chr13	51743567	51743656	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	4	-inf
chr4	43505850	43505930	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr13	3561195	3563787	protein_coding	Gdi2	exon	ENSMUSG00000021218	ProperStrand	49	1	-3.4383
chr3	94166413	94166430	protein_coding	C2cd4d	utr5	ENSMUSG00000091648	NonProperStrand	5	chr5	121655017	121655107	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-8.7807
chr5	141090405	141090422	protein_coding	Lfng	exon	ENSMUSG00000029570	NonProperStrand	92	chr9	64022856	64022881	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-7.1738
chr9	78328188	78328355	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chrX	156315497	156315519	protein_coding	Sh3kbp1	intron	ENSMUSG00000040990	ProperStrand	67	1	-6.1165
chr4	131908418	131908466	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr5	64676309	64676325	protein_coding	Tbc1d1	intron	ENSMUSG00000029174	NonProperStrand	6	1	-12.0068
chr18	10052132	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-3.7898
chr9	108239794	108239841	protein_coding	Rhoa	utr3	ENSMUSG00000007815	ProperStrand	45	chr6	8543654	8543672	protein_coding	Glcci1	utr3	ENSMUSG00000029638	NonProperStrand	2	1	-21.3528
chr4	134315302	134315318	protein_coding	Ldlrap1	intron	ENSMUSG00000037295	NonProperStrand	2	chr7	149170855	149171339	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	1	-19.2464
chr10	75896781	75899256	protein_coding	Pcnt	exon	ENSMUSG00000001151	ProperStrand	127	chr11	97643010	97643090	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.3004
chr4	82662778	82662858	protein_coding	Frem1	intron	ENSMUSG00000059049	NonProperStrand	14	chr4	82664719	82664809	protein_coding	Frem1	intron	ENSMUSG00000059049	ProperStrand	11	1	-20.0608
chr2	158185537	158185653	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr16	23109070	23109093	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-1.1271
chr17	56812116	56812206	SINE	B1_Mus1	Alu	chr17B1_Mus156812096	NonProperStrand	1	chr17	56811893	56811973	SINE	B1_Mus2	Alu	chr17B1_Mus256811813	NonProperStrand	1	1	-inf
chr19	46405229	46405287	protein_coding	Cuedc2	exon	ENSMUSG00000036748	ProperStrand	12	chr1	172612010	172612026	protein_coding	Olfml2b	exon	ENSMUSG00000038463	ProperStrand	57	1	-16.6442
chrX	84483698	84664534	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr3	123210852	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	10	-1.8355
chr4	149022634	149022668	protein_coding	Clstn1	utr3	ENSMUSG00000039953	ProperStrand	173	chr18	35716810	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-0.6975
chr4	122536640	122536697	protein_coding	Cap1	utr3	ENSMUSG00000028656	ProperStrand	45	chr14	76247816	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	3	-11.2520
chr17	36000485	36000501	protein_coding	Nrm	exon	ENSMUSG00000059791	ProperStrand	253	chr2	26768377	26768424	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-2.8982
chr15	78965429	78965519	protein_coding	Micall1	utr3	ENSMUSG00000033039	ProperStrand	48	chr18	31159708	31159727	protein_coding	Rit2	intron	ENSMUSG00000057455	NonProperStrand	5	1	-18.5110
chr17	35384141	35384195	snoRNA	ENSMUSG00000065273_SNORD83	.	ENSMUSG00000065273	ProperStrand	244	chr12	110874223	110874290	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	1	-7.1792
chr2	156843690	156843707	protein_coding	9830001H06Rik	utr3	ENSMUSG00000055485	ProperStrand	26	chr4	131825994	131826064	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	1	-10.9071
chr9	123065930	123065946	protein_coding	Clec3b	exon	ENSMUSG00000025784	ProperStrand	58	chr12	82881859	82881916	protein_coding	Map3k9	utr5	ENSMUSG00000042724	ProperStrand	92	1	-12.5237
chr7	132769370	132769388	protein_coding	Il21r	intron	ENSMUSG00000030745	ProperStrand	2	chr10	79847434	79847484	protein_coding	Mex3d	intron	ENSMUSG00000048696	ProperStrand	14	1	-inf
chr7	38747489	38747579	protein_coding	C80913	exon	ENSMUSG00000030421	NonProperStrand	5	chrX	140891191	140905240	protein_coding	Trpc5	intron	ENSMUSG00000041710	ProperStrand	5	1	-19.0779
chr2	26493478	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr8	26787174	26787191	protein_coding	Whsc1l1	exon	ENSMUSG00000054823	ProperStrand	36	1	-7.2101
chr1	43157647	43167863	protein_coding	AI597479	exon	ENSMUSG00000010290	ProperStrand	36	chr9	15118323	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-4.4275
chr12	90551837	90551858	protein_coding	Nrxn3	intron	ENSMUSG00000066392	ProperStrand	17	chr10	39978350	39978485	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-7.9799
chr11	42440243	42440259	protein_coding	Gabrb2	exon	ENSMUSG00000007653	ProperStrand	248	chr11	6428099	6428154	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-0.9633
chr5	72914752	72914852	protein_coding	Nfxl1	exon	ENSMUSG00000072889	ProperStrand	17	chr4	131908356	131908413	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.5556
chr16	36696918	36696935	protein_coding	Ildr1	intron	ENSMUSG00000022900	NonProperStrand	3	chr11	6428108	6428157	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-9.3720
chr7	119253774	119253792	protein_coding	Usp47	utr3	ENSMUSG00000059263	ProperStrand	40	chr5	74489587	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-4.5466
chr11	9024680	9024704	protein_coding	Upp1	intron	ENSMUSG00000020407	ProperStrand	73	chr4	137091619	137094132	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	2	-12.3362
chr10	127962583	127962600	protein_coding	Esyt1	exon	ENSMUSG00000025366	NonProperStrand	32	chr16	23110913	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.9664
chr18	68002927	68007014	protein_coding	Cep192	exon	ENSMUSG00000024542	ProperStrand	59	chr11	62418014	62418078	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-5.5901
chr9	64023700	64023778	protein_coding	Rpl4	intron	ENSMUSG00000032399	ProperStrand	608	chr9	64023677	64023699	snoRNA	ENSMUSG00000064918_SNORD18	.	ENSMUSG00000064918	ProperStrand	370	3	-11.9293
chr10	127700301	127700381	LTR	MTC	MaLR	chr10MTC127700063	ProperStrand	1	chr9	105696517	105696607	protein_coding	Col6a6	intron	ENSMUSG00000043719	ProperStrand	8	1	-inf
chr1	55068988	55069065	protein_coding	Sf3b1	exon	ENSMUSG00000025982	ProperStrand	158	chr18	73693110	73693133	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-3.6767
chr9	41880386	41889884	protein_coding	Sorl1	exon	ENSMUSG00000049313	ProperStrand	112	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-6.4887
chr8	98269964	98270074	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	chr5	147646721	147646848	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	7	-9.4736
chr7	52007511	52009215	protein_coding	Vrk3	utr5	ENSMUSG00000002205	ProperStrand	22	chr7	118219574	118219639	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-6.1281
chr13	30338190	30338207	protein_coding	Mboat1	utr3	ENSMUSG00000038732	NonProperStrand	148	chr8	32260332	32260423	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-2.9556
chr2	137621039	137621056	lincRNA	Gm14064	intron	ENSMUSG00000085640	ProperStrand	10	chr1	162968442	162968464	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-9.7124
chr4	131865908	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr7	106628150	106628213	snoRNA	ENSMUSG00000064966_Snord15b	.	ENSMUSG00000064966	ProperStrand	74	1	-1.4533
chr11	115910754	115911446	protein_coding	Unk	exon	ENSMUSG00000020770	ProperStrand	21	chr11	69483136	69483211	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.3745
chr10	79783124	79783144	protein_coding	2310011J03Rik	utr5	ENSMUSG00000020133	ProperStrand	2	chr2	26493364	26493449	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-11.0703
chr11	72591967	72591984	protein_coding	Cyb5d2	utr3	ENSMUSG00000057778	ProperStrand	5	chr6	115758045	115758113	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-10.5899
chr16	23110562	23110584	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr13	90238585	90238723	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	2	-7.3642
chrX	15731256	15731336	DNA	Tigger7	MER2_type	chrXTigger715730863	NonProperStrand	1	chrX	15731435	15731525	LINE	Lx5	L1	chrXLx515731456	ProperStrand	1	1	-inf
chr7	29171541	29171558	protein_coding	Med29	utr3	ENSMUSG00000003444	NonProperStrand	134	chr14	8998957	8999325	protein_coding	Pdhb	exon	ENSMUSG00000021748	ProperStrand	28	3	-19.9546
chr7	106002470	106002486	protein_coding	Wnt11	utr3	ENSMUSG00000015957	ProperStrand	14	chr19	8963032	8963048	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-13.1197
chr15	75536983	75537002	protein_coding	Rhpn1	intron	ENSMUSG00000022580	ProperStrand	1	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-inf
chr1	9737097	9737236	protein_coding	Vcpip1	exon	ENSMUSG00000045210	ProperStrand	34	chr4	131908689	131908710	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.0811
chr5	138209329	138209345	protein_coding	Tsc22d4	exon	ENSMUSG00000029723	ProperStrand	24	chr9	50816824	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	1	-13.6659
chr11	116099379	116099395	protein_coding	Evpl	utr5	ENSMUSG00000034282	ProperStrand	33	chr4	131908360	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-4.2144
chr8	38049667	38049683	LTR	MLT1A0	MaLR	chr8MLT1A038049422	NonProperStrand	91	chr10	80642988	80644068	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	2	-8.6688
chr1	71611470	71614406	protein_coding	Atic	exon	ENSMUSG00000026192	ProperStrand	30	chr7	117189892	117189972	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.6386
chr2	60152300	60172555	protein_coding	Ly75	exon	ENSMUSG00000026980	ProperStrand	59	chr5	130300449	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-6.6946
chr9	30958498	30976586	protein_coding	Aplp2	exon	ENSMUSG00000031996	ProperStrand	172	chr16	23111739	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-1.1665
chr14	31529107	31529129	protein_coding	Sfmbt1	intron	ENSMUSG00000006527	NonProperStrand	4	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-14.6015
chr12	102321378	102321401	protein_coding	Smek1	utr5	ENSMUSG00000041846	ProperStrand	66	chr14	33005038	33005090	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-3.8150
chr2	130102070	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	chr12	110887828	110887894	snoRNA	ENSMUSG00000084549_SNORD113	.	ENSMUSG00000084549	ProperStrand	196	5	-13.5748
chr3	36933527	36933544	protein_coding	4932438A13Rik	exon	ENSMUSG00000037270	ProperStrand	96	chr8	73419657	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.3119
chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	chr1	187066785	187066847	snoRNA	ENSMUSG00000077571_Snora36b	.	ENSMUSG00000077571	ProperStrand	244	2	-10.9278
chr11	78029742	78029842	protein_coding	Supt6h	exon	ENSMUSG00000002052	ProperStrand	119	chr4	82618827	82618853	protein_coding	Frem1	intron	ENSMUSG00000059049	ProperStrand	11	1	-15.4082
chr2	129999424	130001070	protein_coding	Snrpb	exon	ENSMUSG00000027404	ProperStrand	21	chr10	110918659	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-5.4616
chr3	54590143	54590160	protein_coding	Smad9	exon	ENSMUSG00000027796	NonProperStrand	15	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-13.5874
chr2	90235299	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	16524110	16524161	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	1	-1.3731
chr17	28024203	28024303	protein_coding	Uhrf1bp1	exon	ENSMUSG00000039512	ProperStrand	79	chr11	69483136	69483211	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.9941
chr5	31117163	31117181	protein_coding	Mapre3	utr5	ENSMUSG00000029166	NonProperStrand	19	chr5	130300460	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-7.7517
chr17	46663594	46663610	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr2	130102056	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-1.6978
chr5	73563222	73563238	protein_coding	Fryl	intron	ENSMUSG00000070733	ProperStrand	173	chr5	121655099	121655129	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-1.9040
chr1	172815034	172815119	protein_coding	Dusp12	utr5	ENSMUSG00000026659	ProperStrand	4	chr16	23111757	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-7.1763
chr3	108228259	108228275	protein_coding	Sars	utr3	ENSMUSG00000068739	NonProperStrand	200	chr8	129468836	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-2.2438
chr4	55431652	55431668	lincRNA	Gm12505	exon	ENSMUSG00000087070	ProperStrand	447	chr11	6519810	6519944	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-4.0269
chr16	5014078	5014094	protein_coding	Glyr1	utr3	ENSMUSG00000022536	ProperStrand	60	chr18	38097033	38097098	protein_coding	Hdac3	utr3	ENSMUSG00000024454	ProperStrand	12	3	-inf
chr11	35774883	35774983	protein_coding	Wwc1	intron	ENSMUSG00000018849	ProperStrand	52	chr4	130305567	130305620	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	1	-10.1974
chr9	78326509	78326573	protein_coding	Eef1a1	utr3	ENSMUSG00000037742	ProperStrand	1990	chr2	63936035	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	2	-2.6727
chr14	32910446	32910526	protein_coding-noncoding	Oxnad1	utr5	ENSMUSG00000021906	NonProperStrand	1	chr14	33271203	33271293	protein_coding	Chat	intron	ENSMUSG00000021919	NonProperStrand	3	1	-inf
chr14	57498727	57498817	LINE	L1MB7	L1	chr14L1MB757498547	ProperStrand	1	chr14	57499046	57499126	SINE	B3	B2	chr14B357499036	ProperStrand	1	1	-inf
chr18	20737676	20737693	protein_coding	Dsg2	exon	ENSMUSG00000044393	ProperStrand	60	chr5	74489542	74489669	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-3.7780
chr10	80642782	80642916	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	1	-1.4289
chr1	39440020	39440037	protein_coding	Tbc1d8	intron	ENSMUSG00000003134	NonProperStrand	8	chr19	8800356	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-7.5245
chr8	13416897	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr5	135016842	135016858	protein_coding	Clip2	intron	ENSMUSG00000063146	ProperStrand	35	1	-7.5284
chr1	3751783	3751873	LINE	L1_Mur2	L1	chr1L1_Mur23751690	ProperStrand	1	chr1	3751904	3751984	LINE	Lx	L1	chr1Lx3751884	NonProperStrand	1	1	-inf
chr18	86783187	86783277	LINE	L1Md_F2	L1	chr18L1Md_F286782327	NonProperStrand	1	chr5	45401453	45401533	LINE	L1Md_F2	L1	chr5L1Md_F245401408	NonProperStrand	7	1	-inf
chr1	123458307	123458675	protein_coding	Ddx18	exon	ENSMUSG00000001674	ProperStrand	41	chr15	98685169	98685216	protein_coding	Mll2	exon	ENSMUSG00000048154	ProperStrand	170	1	-11.9922
chr5	106203731	106203751	protein_coding	Lrrc8d	intron	ENSMUSG00000046079	NonProperStrand	8	chr15	79912145	79912181	protein_coding	Rpl3	exon	ENSMUSG00000060036	ProperStrand	8342	1	-7.5918
chr16	16983566	16983634	protein_coding	Mapk1	utr5	ENSMUSG00000063358	ProperStrand	67	chr13	76341035	76341055	protein_coding	Fam81b	intron	ENSMUSG00000078966	NonProperStrand	220	1	-10.4858
chr2	72094556	72094574	protein_coding	Rapgef4	utr3	ENSMUSG00000049044	NonProperStrand	11	chr19	8799579	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-10.2114
chr13	118057758	118060900	protein_coding	Emb	exon	ENSMUSG00000021728	ProperStrand	13	chr17	87390574	87390592	protein_coding	Rhoq	intron	ENSMUSG00000024143	ProperStrand	3	1	-inf
chr2	33013447	33013527	protein_coding-noncoding	Ralgps1	utr3	ENSMUSG00000038831	NonProperStrand	1	chr2	33013704	33013794	protein_coding	Ralgps1	intron	ENSMUSG00000038831	NonProperStrand	24	1	-inf
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chrX	93136011	93136027	protein_coding	Las1l	exon	ENSMUSG00000057421	ProperStrand	248	1	-5.9030
chr11	115999916	115999932	protein_coding	Mrpl38	exon	ENSMUSG00000020775	NonProperStrand	65	chr7	29136525	29136565	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.2309
chr14	112321116	112321207	LINE	L1Md_F2	L1	chr14L1Md_F2112321084	ProperStrand	1	chr14	112321307	112321397	SINE	B1_Mur4	Alu	chr14B1_Mur4112321310	ProperStrand	1	1	-inf
chr17	39985128	39985295	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr14	33005065	33005221	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	24	-12.8347
chr13	63612936	63612952	protein_coding	Ptch1	exon	ENSMUSG00000021466	NonProperStrand	118	chr2	26493364	26493473	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-2.5298
chr14	39182648	39182666	protein_coding-noncoding	Nrg3	utr3	ENSMUSG00000041014	NonProperStrand	30	chr2	26494709	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.4006
chr10	122217001	122217018	protein_coding	Ppm1h	intron	ENSMUSG00000034613	ProperStrand	51	chr4	116827119	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-7.3640
chr13	98263244	98263294	lincRNA	Gm11019	intron	ENSMUSG00000078952	ProperStrand	113	chr10	23505152	23505184	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-1.1115
chr7	148444798	148444880	protein_coding	Phrf1	exon	ENSMUSG00000038611	ProperStrand	86	chr9	15119639	15119729	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.0263
chr5	115575321	115575341	protein_coding	Unc119b	utr3	ENSMUSG00000046562	ProperStrand	20	chr7	29136529	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.3737
chr10	127523412	127525384	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr19	8799021	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-1.6399
chr7	52642761	52642808	protein_coding	Snrnp70	exon	ENSMUSG00000063511	ProperStrand	61	chr19	8798508	8798553	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-5.1794
chr2	6226566	6226582	antisense	A230108P19Rik	.	ENSMUSG00000087125	ProperStrand	11	chr18	73693113	73693138	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	2	-14.3171
chr10	127553625	127553661	protein_coding	Baz2a	exon	ENSMUSG00000040054	ProperStrand	274	chr16	38158133	38158226	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	1	-5.6444
chr16	17132283	17132338	protein_coding	Sdf2l1	exon	ENSMUSG00000022769	ProperStrand	9	chr3	123210854	123210905	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.6210
chr11	77526518	77526534	protein_coding	Nufip2	intron	ENSMUSG00000037857	ProperStrand	36	chr1	88247816	88247835	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-6.0993
chr11	60530042	60530209	protein_coding	Flii	exon	ENSMUSG00000002812	ProperStrand	42	chr2	4974190	4974207	protein_coding	Optn	exon	ENSMUSG00000026672	ProperStrand	451	1	-9.9923
chr14	21658771	21659008	protein_coding	Plau	exon	ENSMUSG00000021822	NonProperStrand	1	chr3	68889026	68889126	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-inf
chr2	90235292	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr3	121948735	121948825	protein_coding	Gclm	utr5	ENSMUSG00000028124	ProperStrand	31	1	-5.7479
chr2	90619300	90619373	protein_coding	Fnbp4	intron	ENSMUSG00000008200	ProperStrand	45	chr10	23505152	23505203	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.6487
chrX	70682680	70682780	protein_coding	Haus7	utr3	ENSMUSG00000031371	ProperStrand	2	chr14	61398407	61398423	protein_coding	C1qtnf9	exon	ENSMUSG00000071347	ProperStrand	187	1	-18.9618
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr10	80641699	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	1	-3.3227
chr6	88462161	88462219	protein_coding	Sec61a1	exon	ENSMUSG00000030082	ProperStrand	46	chr10	107800722	107800812	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	1	-8.6032
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr4	131826013	131826128	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	4	-12.4394
chr3	33957001	33957149	protein_coding	Fxr1	exon	ENSMUSG00000027680	ProperStrand	58	chr8	129468788	129468878	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-4.4785
chr1	32229711	32229727	protein_coding	Khdrbs2	utr5	ENSMUSG00000026058	ProperStrand	10	chr12	112779148	112779238	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-8.3724
chr11	100748682	100748738	protein_coding	Stat3	utr3	ENSMUSG00000004040	ProperStrand	20	chr16	5256015	5256031	protein_coding	Fam86	utr5	ENSMUSG00000022544	ProperStrand	231	1	-12.8404
chrX	71517240	71517558	protein_coding	Rpl10	exon	ENSMUSG00000008682	ProperStrand	71	chr8	73115775	73115791	protein_coding	Ell	utr3	ENSMUSG00000070002	NonProperStrand	134	1	-11.3616
chr8	87366306	87366362	protein_coding	Calr	utr3	ENSMUSG00000003814	ProperStrand	232	chr11	101466308	101466350	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	3	-14.1538
chr10	13562823	13562840	protein_coding	Aig1	intron	ENSMUSG00000019806	ProperStrand	49	chr7	116663677	116663693	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.8648
chrX	103069921	103070011	protein_coding	Atrx	exon	ENSMUSG00000031229	ProperStrand	54	chr1	89673609	89673689	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-3.4559
chr9	40612018	40612282	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr17	46912438	46912458	protein_coding	Rpl7l1	utr3	ENSMUSG00000063888	ProperStrand	37	2	-14.4601
chr17	34702618	34721446	protein_coding	Notch4	exon	ENSMUSG00000015468	ProperStrand	11	chr16	23111741	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-16.3086
chr19	8963025	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	chr6	71832550	71832689	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	27	-0.9719
chr4	116875159	116875249	snRNA	ENSMUSG00000070228_U5	.	ENSMUSG00000070228	ProperStrand	131	chr17	24857719	24857799	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.1187
chr2	22444740	22444814	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	chr2	166888996	166889056	snoRNA	ENSMUSG00000077515_SNORD12	.	ENSMUSG00000077515	ProperStrand	191	1	-5.4917
chr5	144935649	144946487	protein_coding	Lmtk2	exon	ENSMUSG00000038970	ProperStrand	60	chr14	33005095	33005237	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	2	-6.7164
chr2	118581763	118581799	protein_coding	A430105I19Rik	utr3	ENSMUSG00000045838	ProperStrand	37	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-2.7473
chr2	13496104	13496181	protein_coding	Vim	exon	ENSMUSG00000026728	ProperStrand	33	chr4	131908363	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.3621
chr11	52202106	52202169	protein_coding	Vdac1	utr3	ENSMUSG00000020402	ProperStrand	107	chr4	126703409	126703426	protein_coding	Sfpq	exon	ENSMUSG00000028820	ProperStrand	340	1	-8.6790
chr15	12078594	12078631	protein_coding	Zfr	intron	ENSMUSG00000022201	ProperStrand	48	chr9	15118245	15118320	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	3	-9.5225
chr1	141354943	141358029	protein_coding	Aspm	exon	ENSMUSG00000033952	ProperStrand	64	chr8	129468800	129468855	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-4.2908
chr5	148170753	148170771	protein_coding	Flt3	intron	ENSMUSG00000042817	NonProperStrand	8	chr12	77066968	77066984	protein_coding	Syne2	exon	ENSMUSG00000063450	ProperStrand	63	1	-17.2598
chr6	90981626	90984736	protein_coding	Nup210	exon	ENSMUSG00000030091	ProperStrand	140	chrX	9491043	9491059	protein_coding	Sytl5	exon	ENSMUSG00000054453	ProperStrand	6	3	-18.8500
chr8	124552133	124552149	protein_coding	Banp	utr3	ENSMUSG00000025316	NonProperStrand	34	chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	1	-11.7649
chr18	46203645	46203662	LTR	MLT1G1	MaLR	chr18MLT1G146203583	ProperStrand	1	chr4	131865855	131865910	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr14	115987325	115987343	protein_coding	Gpc5	intron	ENSMUSG00000022112	ProperStrand	21	chr16	23110914	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.5481
mmu-miR-6240	1	26	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr5	108334194	108336498	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	11	-4.4883
chr6	125113047	125113225	protein_coding	Gapdh	exon	ENSMUSG00000057666	ProperStrand	356	chr4	131865401	131865493	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	2	-2.0796
chr8	87200241	87200341	protein_coding	Nacc1	exon	ENSMUSG00000001910	NonProperStrand	3	chr16	23110939	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	NonProperStrand	93	2	-inf
chr10	46269784	46269800	LTR	IAPEY3-int	ERVK	chr10IAPEY3-int46264559	NonProperStrand	2	chr11	6428145	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-10.4671
chr12	68762114	68762204	LINE	L1_Mus2	L1	chr12L1_Mus268762115	NonProperStrand	3	chr7	54442313	54442393	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	1	-18.0827
chr4	43505887	43505931	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr17	9195502	9195523	protein_coding	1700010I14Rik	intron	ENSMUSG00000023873	ProperStrand	1	1	-inf
chr8	48972476	48972494	protein_coding	Wwc2	exon	ENSMUSG00000031563	NonProperStrand	56	chr11	97642952	97643079	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-6.8089
chr9	64022855	64022910	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	chr19	8963032	8963048	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-4.9269
chr16	22048932	22049011	protein_coding	Senp2	utr3	ENSMUSG00000022855	ProperStrand	13	chr16	23110828	23110871	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.3283
chr10	23505152	23505254	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	chr5	147646410	147646465	snoRNA	ENSMUSG00000077185_SNORD102	.	ENSMUSG00000077185	ProperStrand	142	6	-4.2396
chr19	57685637	57685737	protein_coding	Atrnl1	utr5	ENSMUSG00000054843	ProperStrand	22	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-5.5214
chr13	67217198	67217215	LTR	RLTR9E	ERVK	chr13RLTR9E67216909	NonProperStrand	9	chr9	78550961	78550977	protein_coding	Cd109	exon	ENSMUSG00000046186	NonProperStrand	36	1	-18.0731
chr3	32346883	32346967	protein_coding	Pik3ca	exon	ENSMUSG00000027665	ProperStrand	23	chr8	129468749	129468839	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-6.2916
chr7	51505822	51505902	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	chr14	76247752	76247842	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	3	-1.9879
chr4	133272431	133272531	protein_coding	Arid1a	intron	ENSMUSG00000007880	ProperStrand	465	chr2	158182156	158182209	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-1.4147
chr7	13516163	13516203	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr1	88247757	88247875	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	3	-3.4434
chr8	103289497	103289516	Simple_repeat	(CA)n	Simple_repeat	chr8(CA)n103289418	ProperStrand	10	chr8	98269959	98270095	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	4	-inf
chr10	62061629	62064971	protein_coding	Ddx21	utr5	ENSMUSG00000020075	ProperStrand	137	chr16	23111779	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-0.7710
chr2	147009103	147009122	protein_coding	Nkx2-2	utr3	ENSMUSG00000027434	NonProperStrand	84	chr3	40496658	40496674	protein_coding	Intu	exon	ENSMUSG00000060798	NonProperStrand	17	1	-15.2084
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	53409486	53409502	protein_coding	Asnsd1	utr5	ENSMUSG00000026095	NonProperStrand	105	5	-14.5484
chr15	103182918	103182951	protein_coding	Itga5	exon	ENSMUSG00000000555	ProperStrand	28	chr13	30338191	30338207	protein_coding	Mboat1	utr3	ENSMUSG00000038732	NonProperStrand	148	2	-18.9655
chr17	24841616	24841667	protein_coding	Tbl3	exon	ENSMUSG00000040688	ProperStrand	42	chr4	131865913	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.3470
chr15	83402743	83404236	protein_coding	Tspo	exon	ENSMUSG00000041736	ProperStrand	3	chr5	130300525	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-inf
chr7	149195063	149195141	protein_coding	Mob2	utr3	ENSMUSG00000025147	ProperStrand	20	chr18	35716811	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.1514
chr19	5802395	5802475	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr4	100832775	100834488	protein_coding	Jak1	exon	ENSMUSG00000028530	ProperStrand	30	1	-8.9369
mmu-miR-2137	0	19	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	chr10	11063464	11063480	protein_coding	Epm2a	exon	ENSMUSG00000055493	ProperStrand	28	1	-13.0974
chr19	6375951	6375992	protein_coding	Sf1	exon	ENSMUSG00000024949	ProperStrand	251	chr8	59991434	59991450	protein_coding	Hmgb2	exon	ENSMUSG00000054717	NonProperStrand	96	1	-9.5009
chr19	8798484	8798513	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	chr19	8963032	8963048	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-2.3185
chr12	34123387	34123438	protein_coding	Twistnb	utr3	ENSMUSG00000020561	ProperStrand	6	chr4	122970403	122970493	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-12.1637
chr8	87590174	87590195	protein_coding	Fbxw9	exon	ENSMUSG00000008167	ProperStrand	2	chr7	29136587	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-9.5181
chrX	20258253	20258313	protein_coding	Uba1	exon	ENSMUSG00000001924	ProperStrand	156	chr3	129254223	129254299	protein_coding	Elovl6	intron	ENSMUSG00000041220	ProperStrand	59	2	-17.7583
chrX	156733755	156733776	LINE	Lx6	L1	chrXLx6156733538	NonProperStrand	1	chr2	144087414	144087463	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-inf
chr9	78023108	78023189	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr2	69262885	69262930	protein_coding	Lrp2	utr3	ENSMUSG00000027070	ProperStrand	35	2	-11.2052
chr17	22274461	22274480	LTR	RLTR1B-int	ERV1	chr17RLTR1B-int22274032	NonProperStrand	9	chr8	129468746	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	6	-19.9747
chr11	117191705	117191755	protein_coding	Sept9	intron	ENSMUSG00000059248	ProperStrand	60	chr16	23110909	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-1.4598
chr1	33828651	33828669	protein_coding	Zfp451	intron	ENSMUSG00000042197	NonProperStrand	393	chr7	52381972	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-3.1227
chr15	9038120	9038136	protein_coding	1110020G09Rik	utr3	ENSMUSG00000022253	NonProperStrand	20	chr11	106362637	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-9.6204
chr18	52854063	52854080	protein_coding	Gykl1	exon	ENSMUSG00000053624	ProperStrand	18	chr19	8963051	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	6	-21.8556
chr7	52331748	52331765	protein_coding	Nosip	exon	ENSMUSG00000003421	ProperStrand	27	chr2	90854674	90854690	protein_coding	Celf1	utr3	ENSMUSG00000005506	NonProperStrand	28	1	-16.4889
chr16	33902884	33902926	protein_coding	Itgb5	exon	ENSMUSG00000022817	ProperStrand	49	chr16	23110527	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.8132
chrX	71482550	71482780	protein_coding	Flna	exon	ENSMUSG00000031328	ProperStrand	134	chr5	130295519	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-3.7189
chr19	41450350	41450368	protein_coding	Pik3ap1	utr5	ENSMUSG00000025017	ProperStrand	16	chr16	23111734	23111783	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.2713
chr7	119253776	119253792	protein_coding	Usp47	utr3	ENSMUSG00000059263	ProperStrand	40	chr10	23505149	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.8310
chr12	71146391	71146407	protein_coding	Nin	exon	ENSMUSG00000021068	ProperStrand	95	chr2	30329670	30329733	protein_coding	Ier5l	utr5	ENSMUSG00000089762	ProperStrand	4	1	-17.9620
chr11	36396934	36397014	protein_coding	Odz2	intron	ENSMUSG00000049336	ProperStrand	106	chr1	178002052	178002142	protein_coding	Pld5	intron	ENSMUSG00000055214	NonProperStrand	5	1	-17.2816
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr4	132861901	132864665	protein_coding	Wdtc1	exon	ENSMUSG00000037622	ProperStrand	81	1	-8.0055
chr2	27205332	27205352	protein_coding	Vav2	intron	ENSMUSG00000009621	NonProperStrand	31	chr7	117189932	117190060	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	3	-10.9947
chr19	38477234	38477251	protein_coding	Tmem20	exon	ENSMUSG00000044026	NonProperStrand	23	chr2	130103750	130103808	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-10.4081
chr1	190802265	190805148	protein_coding	Kctd3	intron	ENSMUSG00000026608	ProperStrand	28	chr2	158185554	158185655	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	2	-12.8157
chr17	25244064	25244276	protein_coding	Telo2	exon	ENSMUSG00000024170	ProperStrand	17	chr5	137963697	137963720	protein_coding	Gigyf1	exon	ENSMUSG00000029714	ProperStrand	49	1	-16.3519
chrX	96498209	96498289	LINE	L1MC3	L1	chrXL1MC396497885	NonProperStrand	1	chrX	96498564	96498654	LINE	L1MC3	L1	chrXL1MC396498505	NonProperStrand	1	1	-inf
chr12	17552949	17553087	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr1	162968445	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	5	-1.2784
chr5	66994662	66994752	protein_coding	Apbb2	intron	ENSMUSG00000029207	ProperStrand	25	chrX	7175681	7175761	protein_coding	Ppp1r3f	intron	ENSMUSG00000039556	ProperStrand	23	1	-16.9600
chr18	80446521	80446611	LTR	ORR1B2	MaLR	chr18ORR1B280446396	ProperStrand	1	chr18	80446728	80446808	LTR	RLTR40	ERVK	chr18RLTR4080446721	NonProperStrand	1	1	-inf
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr3	157729963	157729979	protein_coding	Lrrc40	utr3	ENSMUSG00000063052	ProperStrand	147	1	-6.0211
chr9	106088788	106090931	protein_coding	Wdr82	exon	ENSMUSG00000020257	ProperStrand	34	chr1	89673628	89673718	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-4.3250
chr19	9000035	9000063	protein_coding	B3gat3	exon	ENSMUSG00000071649	ProperStrand	2	chr11	55296241	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-13.6189
chr19	8799022	8799051	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	chr9	40611666	40612168	snoRNA	ENSMUSG00000075876_Snord14c	.	ENSMUSG00000075876	ProperStrand	104	3	-11.2871
chr9	24549572	24549619	protein_coding	Tbx20	intron	ENSMUSG00000031965	NonProperStrand	110	chr3	108357255	108357357	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	2	-5.8032
chr2	120334359	120334392	protein_coding	Zfp106	utr3	ENSMUSG00000027288	ProperStrand	199	chr17	35088957	35088980	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	2	-6.0616
chr8	93525704	93529621	protein_coding	Chd9	utr3	ENSMUSG00000056608	ProperStrand	35	chr16	23111431	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.0755
chr13	9833569	9833668	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	1	-0.8030
chr19	45057414	45057444	protein_coding	Fam178a	utr3	ENSMUSG00000036097	ProperStrand	29	chr9	72816966	72816982	protein_coding	Dyx1c1	exon	ENSMUSG00000092192	ProperStrand	34	1	-15.9103
chr10	82097396	82097465	protein_coding	Tdg	intron	ENSMUSG00000034674	ProperStrand	42	chr2	26494710	26494800	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.7619
chr18	75285177	75286520	protein_coding	Dym	exon	ENSMUSG00000035765	ProperStrand	22	chr8	98269962	98270062	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-7.5392
chr17	24858085	24858147	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr7	20310054	20310070	protein_coding	Pvrl2	exon	ENSMUSG00000062300	ProperStrand	110	1	-8.4394
chr11	62417001	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	chr8	13876096	13876226	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-0.7694
chr1	173338926	173338944	protein_coding	Arhgap30	exon	ENSMUSG00000048865	ProperStrand	6	chr9	15119631	15119649	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-7.1405
chr7	133938883	133938936	protein_coding	Aldoa	utr3	ENSMUSG00000030695	ProperStrand	721	chr8	95569475	95569492	protein_coding	Ces1a	intron	ENSMUSG00000071047	ProperStrand	5	3	-21.6579
chr13	21414729	21414756	miRNA	AC124460.1	.	ENSMUSG00000093647	ProperStrand	23	chr2	32563692	32563717	protein_coding	Cdk9	exon	ENSMUSG00000009555	ProperStrand	12	1	-18.3296
chr4	138748879	138833156	protein_coding	Capzb	utr5	ENSMUSG00000028745	ProperStrand	44	chr16	23110913	23111005	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-3.3940
chr8	23534887	23538304	protein_coding	Mrps31	exon	ENSMUSG00000031533	ProperStrand	3	chr7	116664797	116664877	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-8.6415
chr10	87925518	87925603	protein_coding	Chpt1	intron	ENSMUSG00000060002	ProperStrand	15	chr11	97642957	97643047	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-5.0602
chr9	56054971	56054988	protein_coding	C230081A13Rik	exon	ENSMUSG00000074305	NonProperStrand	5	chr18	33954917	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-8.5187
chr18	73693113	73693188	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr11	83107805	83107903	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	7	-12.5401
chr8	108632533	108632623	protein_coding	Nfatc3	exon	ENSMUSG00000031902	ProperStrand	75	chr8	129468787	129468867	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-3.9912
chr6	124765598	124765655	protein_coding	Usp5	exon	ENSMUSG00000038429	ProperStrand	35	chr9	120039635	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-7.2434
chr15	76619130	76619147	protein_coding	Arhgap39	intron	ENSMUSG00000033697	ProperStrand	29	chr2	166890780	166890858	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	1	-11.8511
chr1	25513904	25513920	protein_coding	Bai3	exon	ENSMUSG00000033569	ProperStrand	9	chr14	31827501	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-10.8146
chr7	148496846	148496875	protein_coding	Deaf1	exon	ENSMUSG00000058886	ProperStrand	23	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-10.9175
chr7	148140764	148140854	protein_coding	Ifitm2	utr3	ENSMUSG00000060591	ProperStrand	25	chr18	35714145	35714225	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-5.1110
chr19	5719336	5719352	protein_coding	Ehbp1l1	exon	ENSMUSG00000024937	ProperStrand	75	chr16	23110828	23110957	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-0.9915
chr10	76511807	76511855	protein_coding	Slc19a1	intron	ENSMUSG00000001436	ProperStrand	11	chr17	35822057	35822257	protein_coding	Ddr1	exon	ENSMUSG00000003534	ProperStrand	129	1	-15.2587
chr12	85910822	85910838	protein_coding	Vsx2	utr5	ENSMUSG00000021239	ProperStrand	26	chr3	68889026	68889126	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-4.8370
chr5	65989574	65989674	protein_coding	Ube2k	utr3	ENSMUSG00000029203	ProperStrand	289	chr13	22006768	22006793	tRNA	tRNA85-LeuCAA	.	1574943	ProperStrand	54	1	-10.3745
chr5	107120446	107120473	protein_coding	Zfp644	intron	ENSMUSG00000049606	ProperStrand	35	chr5	74489640	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-4.8045
chr7	19674352	19674421	protein_coding-noncoding	Dmpk	utr5	ENSMUSG00000030409	ProperStrand	1	chr9	15120988	15121088	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	1	-inf
chr5	135720625	135720652	protein_coding	Baz1b	utr3	ENSMUSG00000002748	ProperStrand	83	chr4	131908356	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-3.1749
chr7	26013792	26013882	protein_coding	Gsk3a	utr3	ENSMUSG00000057177	ProperStrand	14	chr4	131908814	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.6665
chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr16	18240811	18240880	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	2	-4.4275
chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	chr5	142936195	142936244	protein_coding	Foxk1	utr3	ENSMUSG00000056493	ProperStrand	19	1	-9.3000
chr19	18745537	18745554	protein_coding	2410127L17Rik	exon	ENSMUSG00000024726	ProperStrand	43	chr11	62416951	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-6.7028
chr14	70965961	70966117	protein_coding	Hr	exon	ENSMUSG00000022096	ProperStrand	7	chr16	23110913	23111005	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.4785
chr2	22444756	22444824	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	chr10	23506278	23506314	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-1.8234
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr12	76919851	76919870	protein_coding	Syne2	intron	ENSMUSG00000063450	NonProperStrand	17	1	-9.7817
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	74489204	74489572	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	13	-3.6524
chr9	15119650	15119762	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	chr12	110874223	110874290	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	2	-0.8883
chr2	90235315	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr3	58673399	58673415	protein_coding	Clrn1	intron	ENSMUSG00000043850	NonProperStrand	13	1	-7.5011
chr14	17724373	17724415	Simple_repeat	(GAAAA)n	Simple_repeat	chr14(GAAAA)n17724364	ProperStrand	1	chr4	131865380	131865480	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-inf
chr7	135561631	135561648	protein_coding	Rgs10	utr5	ENSMUSG00000030844	NonProperStrand	2	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-10.5602
chr11	77994713	77994926	protein_coding	Rpl23a	exon	ENSMUSG00000058546	ProperStrand	121	chr12	106269467	106269557	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-2.8556
chr14	35170125	35170187	SINE	B4	B4	chr14B435170079	ProperStrand	11	chr17	24857718	24857808	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-5.4831
chr15	80790844	80790934	protein_coding	Adsl	exon	ENSMUSG00000022407	ProperStrand	11	chr4	131908236	131908319	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-7.4568
chr3	96709135	96709219	protein_coding	Gpr89	utr5	ENSMUSG00000028096	ProperStrand	20	chr8	27062595	27062625	protein_coding	Hgsnat	intron	ENSMUSG00000037260	ProperStrand	41	2	-inf
chr1	181675234	181675324	protein_coding	Ahctf1	utr3	ENSMUSG00000026491	ProperStrand	39	chr2	172379086	172379103	protein_coding	Tfap2c	exon	ENSMUSG00000028640	ProperStrand	13	2	-19.3939
chr13	53073980	53073997	protein_coding	Nfil3	intron	ENSMUSG00000056749	NonProperStrand	66	chr11	69483237	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.2889
chr1	20922259	20922275	protein_coding	Paqr8	utr5	ENSMUSG00000025931	NonProperStrand	60	chr12	106269355	106269445	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	2	-6.9403
chr9	44630893	44630909	protein_coding	Mll1	exon	ENSMUSG00000002028	NonProperStrand	26	chr11	62416602	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-6.8193
chr10	67887901	67887919	LTR	MT2A	ERVL	chr10MT2A67887852	NonProperStrand	1	chr2	130102515	130102593	protein_coding	Nop56	exon	ENSMUSG00000027405	ProperStrand	125	1	-inf
chr17	32453268	32453285	protein_coding	Akap8	exon	ENSMUSG00000024045	ProperStrand	339	chr7	87235685	87235823	protein_coding	Zfp710	utr3	ENSMUSG00000048897	ProperStrand	229	1	-7.1721
chr15	58559800	58559890	protein_coding	Fer1l6	intron	ENSMUSG00000037106	NonProperStrand	5	chr15	57646220	57646300	protein_coding	Zhx2	intron	ENSMUSG00000071757	ProperStrand	20	1	-19.1301
chr8	39436369	39436386	protein_coding	Sgcz	intron	ENSMUSG00000039539	ProperStrand	46	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-8.2715
chr11	69217700	69217800	protein_coding	Kdm6b	exon	ENSMUSG00000018476	ProperStrand	76	chr2	26493366	26493441	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-5.6593
chr9	121289861	121289951	protein_coding	Trak1	intron	ENSMUSG00000032536	ProperStrand	152	chr9	118669421	118669511	protein_coding	Itga9	intron	ENSMUSG00000039115	NonProperStrand	11	1	-14.9102
chr4	151366426	151366499	protein_coding	Phf13	exon	ENSMUSG00000047777	ProperStrand	38	chr7	117189930	117190020	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.1847
chr6	125410657	125410683	protein_coding	Cd9	utr3	ENSMUSG00000030342	ProperStrand	81	chr2	32818853	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-4.8882
chr4	148608847	148608864	protein_coding	Kif1b	utr3	ENSMUSG00000063077	NonProperStrand	19	chr1	162967513	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-9.3461
chrX	148336150	148336223	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	chr3	95980360	95980410	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	3	-7.2469
chr8	47294529	47294629	protein_coding	Slc25a4	exon	ENSMUSG00000031633	ProperStrand	53	chr1	162966007	162966041	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-3.8341
chr10	90579651	90579741	protein_coding	Slc25a3	utr3	ENSMUSG00000061904	ProperStrand	74	chr7	30807286	30807366	protein_coding	Zfp568	exon	ENSMUSG00000074221	ProperStrand	110	1	-11.6747
chr15	85862081	85862171	protein_coding	Celsr1	exon	ENSMUSG00000016028	ProperStrand	56	chr11	6428087	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.3176
chr2	91768900	91768990	protein_coding	Chrm4	utr3	ENSMUSG00000040495	ProperStrand	6	chr4	131908729	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-13.3875
chr13	67001636	67001714	protein_coding	Uqcrb	utr3	ENSMUSG00000021520	ProperStrand	5	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-10.9963
chrX	7817344	7817360	protein_coding	Ftsj1	utr3	ENSMUSG00000031171	NonProperStrand	2	chr10	80328245	80328404	protein_coding	3110056O03Rik	exon	ENSMUSG00000035206	ProperStrand	11	1	-21.3789
chr11	101320279	101320310	protein_coding	Vat1	utr3	ENSMUSG00000034993	ProperStrand	69	chr10	23505152	23505257	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.0487
chr8	14901316	14901417	protein_coding	Cln8	utr3	ENSMUSG00000026317	ProperStrand	5	chr18	35716685	35716762	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-6.9999
chr17	62955681	62955697	protein_coding	Efna5	exon	ENSMUSG00000090425	NonProperStrand	1	chr18	73693166	73693190	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-inf
chr11	77995191	77995253	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	chr1	9932563	9932628	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-1.2221
chr4	128887788	128891202	protein_coding	Yars	exon	ENSMUSG00000028811	ProperStrand	131	chr7	52381973	52382010	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-5.1807
chr4	82891003	82891019	protein_coding	Ttc39b	exon	ENSMUSG00000038172	ProperStrand	78	chr4	131865929	131865961	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.3778
chr1	130173438	130173479	protein_coding	Ubxn4	intron	ENSMUSG00000026353	ProperStrand	19	chr2	130101268	130101311	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	2	-14.1883
chr12	112779147	112779169	protein_coding	Eif5	intron	ENSMUSG00000021282	ProperStrand	125	chr19	8963051	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-3.5962
chr2	29926947	29926989	protein_coding	Set	utr3	ENSMUSG00000054766	ProperStrand	167	chr19	8963087	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-1.6432
chr19	24758765	24758782	protein_coding	Pgm5	utr3	ENSMUSG00000041731	ProperStrand	8	chr4	131908689	131908793	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-11.8763
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr12	111929806	111930504	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	2	-1.5783
chr8	111469101	111470229	protein_coding	Zfhx3	exon	ENSMUSG00000038872	ProperStrand	65	chr16	19883890	19884018	protein_coding	A930003A15Rik	exon	ENSMUSG00000075330	ProperStrand	93	1	-12.2720
chr7	54164355	54164371	protein_coding	Tsg101	exon	ENSMUSG00000014402	NonProperStrand	1	chr9	120039546	120039591	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-inf
chr4	55542634	55542654	protein_coding	Klf4	exon	ENSMUSG00000003032	ProperStrand	64	chr2	158182180	158182292	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-4.8777
chr1	74328742	74329027	protein_coding	Aamp	exon	ENSMUSG00000006299	ProperStrand	16	chr16	23110863	23110963	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.9771
chr10	5989268	5989356	protein_coding	Akap12	utr3	ENSMUSG00000038587	ProperStrand	1008	chr15	82980076	82980166	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-1.8958
chr10	40948033	40948052	protein_coding	Fig4	exon	ENSMUSG00000038417	ProperStrand	18	chr18	35716808	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.3552
chr1	92689614	92689630	protein_coding	Col6a3	exon	ENSMUSG00000048126	ProperStrand	79	chr17	13112450	13112511	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-4.0571
chr10	80607441	80607531	protein_coding	Zbtb7a	exon	ENSMUSG00000035011	ProperStrand	39	chr7	117189950	117190030	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.1353
chr17	57198972	57199043	protein_coding	Slc25a23	exon	ENSMUSG00000046329	ProperStrand	6	chr5	108334225	108334315	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-9.5107
chr13	88569462	88569482	LTR	RMER6D	ERVK	chr13RMER6D88569354	ProperStrand	42	chr1	162967735	162967794	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	1	-10.9663
chr5	74489234	74489324	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr2	31347878	31353689	protein_coding	Ass1	exon	ENSMUSG00000076441	ProperStrand	29	1	-7.0640
chr14	121888524	121888585	protein_coding	Slc15a1	intron	ENSMUSG00000025557	ProperStrand	14	chr8	13876156	13876226	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-10.0910
chr16	30201464	30201526	lincRNA	Gm17516	exon	ENSMUSG00000080134	ProperStrand	10	chr17	26360446	26360536	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	10	-inf
chr2	168845009	168845069	LTR	RMER17C	ERVK	chr2RMER17C168844970	ProperStrand	3	chr11	68886935	68887025	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	2	-17.2984
chr11	4077527	4077610	protein_coding	Sf3a1	exon	ENSMUSG00000002129	ProperStrand	78	chr18	35716685	35716775	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	6	-11.3955
chr6	71251186	71251276	protein_coding	Smyd1	intron	ENSMUSG00000055027	NonProperStrand	3	chr1	87983867	87983947	snoRNA	ENSMUSG00000077274_SNORA26	.	ENSMUSG00000077274	ProperStrand	361	1	-16.1295
chr17	66868749	66868765	protein_coding	Rab12	exon	ENSMUSG00000023460	ProperStrand	12	chr18	73693169	73693187	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-8.7638
mmu-miR-1195	1	19	miRNA	mmu-miR-1195	.	mmu-miR-1195	ProperStrand	13	chr7	87225953	87226043	protein_coding	Zfp710	utr5	ENSMUSG00000048897	ProperStrand	229	2	-inf
chr1	180885279	180885295	protein_coding	Smyd3	utr3	ENSMUSG00000055067	NonProperStrand	190	chr9	120039549	120039649	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.4106
chr13	24824232	24824248	protein_coding	Fam65b	utr3	ENSMUSG00000036006	ProperStrand	51	chr19	8986417	8986994	protein_coding	Ganab	exon	ENSMUSG00000071650	ProperStrand	145	1	-11.8697
chr19	3882061	3882104	protein_coding	Chka	exon	ENSMUSG00000024843	ProperStrand	17	chr16	23111382	23111472	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.3471
chr8	120298251	120298270	LTR	MLT1B	MaLR	chr8MLT1B120298076	ProperStrand	5	chr15	98350152	98350229	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	5	-inf
chr11	77886980	77886998	protein_coding	Eral1	utr3	ENSMUSG00000020832	ProperStrand	8	chr4	62978525	62978541	protein_coding	Col27a1	exon	ENSMUSG00000045672	ProperStrand	32	1	-18.1730
chr2	71679337	71679577	protein_coding	Itga6	exon	ENSMUSG00000027111	ProperStrand	54	chr5	130300458	130300538	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-4.7136
chr15	83635837	83635854	protein_coding	Mpped1	intron	ENSMUSG00000041708	NonProperStrand	5	chr7	29136549	29136574	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-7.2327
chr4	138992117	138993020	protein_coding	Ubr4	exon	ENSMUSG00000066036	ProperStrand	304	chr3	96132451	96132514	snRNA	ENSMUSG00000075978_U1	.	ENSMUSG00000075978	ProperStrand	132	1	-8.4827
chr19	10702326	10702931	protein_coding	Ddb1	utr3	ENSMUSG00000024740	ProperStrand	304	chr3	68889129	68889219	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-0.7677
chr18	37911790	37911806	protein_coding	Pcdhga9	intron	ENSMUSG00000023036	ProperStrand	245	chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	1	-9.7464
chr3	152450610	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	chr13	58400751	58400770	protein_coding	Kif27	intron	ENSMUSG00000060176	ProperStrand	75	1	-8.3577
chr14	70986726	70986743	protein_coding	Fam160b2	exon	ENSMUSG00000022095	ProperStrand	24	chr16	23111448	23111497	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.7195
chr11	78086787	78086944	protein_coding	2610507B11Rik	exon	ENSMUSG00000010277	ProperStrand	246	chr19	28638849	28638913	protein_coding	Glis3	intron	ENSMUSG00000052942	ProperStrand	14	1	-13.4496
chr2	162880535	162880582	protein_coding	Mybl2	utr5	ENSMUSG00000017861	ProperStrand	230	chr4	151851217	151851234	protein_coding	Nphp4	intron	ENSMUSG00000039577	ProperStrand	33	1	-11.8258
chr1	162966189	162966270	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	chr9	120039533	120039683	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	10	-3.9610
chr17	27559700	27559717	protein_coding	Grm4	utr3	ENSMUSG00000063239	ProperStrand	147	chr4	131865853	131865946	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.2901
chr13	49788428	49788484	protein_coding	Iars	exon	ENSMUSG00000037851	ProperStrand	95	chr5	74489620	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-2.9409
chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	chr5	121655016	121655086	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-0.9011
chr4	118809614	118809709	protein_coding	Slc2a1	utr3	ENSMUSG00000028645	ProperStrand	361	chr11	119008395	119008411	protein_coding	Tbc1d16	utr3	ENSMUSG00000039976	ProperStrand	19	2	-18.4645
chr1	162967746	162967806	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	chr18	35102297	35102336	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	12	-21.4313
chr11	37216132	37216212	SINE	B3	B2	chr11B337216113	ProperStrand	1	chr11	37215840	37215930	SINE	MIR3	MIR	chr11MIR337215799	ProperStrand	1	1	-inf
chr10	62043474	62043593	protein_coding	Ddx21	utr3	ENSMUSG00000020075	ProperStrand	137	chr8	87426786	87426804	protein_coding	Klf1	exon	ENSMUSG00000054191	NonProperStrand	70	2	-18.0490
chr2	26285647	26285732	protein_coding	Sec16a	exon	ENSMUSG00000026924	ProperStrand	86	chr5	121655018	121655108	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.0891
chr15	96409209	96409234	protein_coding	Slc38a1	exon	ENSMUSG00000023169	ProperStrand	69	chr11	67167096	67167112	protein_coding	Myh13	exon	ENSMUSG00000060180	ProperStrand	145	1	-11.2609
chr18	67805807	67805876	protein_coding	Psmg2	intron	ENSMUSG00000024537	ProperStrand	13	chr12	17552968	17553058	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-8.1509
chr11	119136228	119136244	protein_coding	Gaa	exon	ENSMUSG00000025579	NonProperStrand	201	chr18	73693170	73693188	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-3.2373
chr19	46022236	46022252	protein_coding	9130011E15Rik	intron	ENSMUSG00000039901	ProperStrand	129	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-3.5502
chr3	153575088	153575167	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	chr5	130295416	130295506	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-1.0975
chr11	105917691	105917722	protein_coding	Dcaf7	utr3	ENSMUSG00000049354	ProperStrand	30	chr2	26493366	26493496	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-5.0680
chr8	120124277	120124295	protein_coding	Plcg2	intron	ENSMUSG00000034330	NonProperStrand	7	chr8	10924953	10924969	protein_coding	3930402G23Rik	utr3	ENSMUSG00000038917	ProperStrand	13	1	-20.5261
chr3	96507527	96507617	protein_coding-noncoding	Pias3	utr5	ENSMUSG00000028101	ProperStrand	1	chr3	96507305	96507385	protein_coding	Pias3	intron	ENSMUSG00000028101	ProperStrand	5	1	-inf
chr16	5235112	5235283	protein_coding	Alg1	exon	ENSMUSG00000039427	ProperStrand	8	chr16	23110989	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.2180
chr17	28537389	28537405	protein_coding	Fkbp5	utr3	ENSMUSG00000024222	NonProperStrand	6	chr7	54107267	54107293	protein_coding	Ldha	exon	ENSMUSG00000063229	ProperStrand	280	1	-14.9761
chr11	77662881	77662944	protein_coding	Myo18a	exon	ENSMUSG00000000631	ProperStrand	124	chr16	23109028	23109093	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	5	-inf
chr10	59326644	59326734	protein_coding	Micu1	utr3	ENSMUSG00000020111	ProperStrand	4	chr18	35716763	35716843	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-7.5042
chr7	133939799	133940128	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	chr15	81480761	81480851	protein_coding	Ep300	exon	ENSMUSG00000055024	ProperStrand	118	1	-6.9938
chr3	14895075	14895113	protein_coding	Car2	exon	ENSMUSG00000027562	ProperStrand	14	chr17	24856613	24856713	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-9.3652
chr16	56035865	56035984	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	chr5	74489593	74489677	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	8	-8.1766
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr11	62416953	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-2.3748
chr1	182740393	182741997	protein_coding	H3f3a	exon	ENSMUSG00000060743	ProperStrand	46	chr3	108357255	108357345	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	2	-8.3349
chr5	27676304	27676321	protein_coding	Dpp6	intron	ENSMUSG00000061576	ProperStrand	35	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.6607
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr12	82317769	82317785	protein_coding	Slc8a3	exon	ENSMUSG00000079055	ProperStrand	126	2	-11.9265
chr5	34112034	34112050	protein_coding	Letm1	exon	ENSMUSG00000005299	NonProperStrand	145	chr7	116663675	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.1527
chr3	95488159	95488370	protein_coding	Adamtsl4	exon	ENSMUSG00000015850	NonProperStrand	4	chr15	22686761	22686781	protein_coding	Cdh18	intron	ENSMUSG00000040420	NonProperStrand	26	1	-19.1369
chr19	8798775	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	chr12	110874223	110874290	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	1	-1.8302
chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	chr2	32818804	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-1.0410
chr4	124804221	124804238	protein_coding	Zc3h12a	exon	ENSMUSG00000042677	ProperStrand	37	chr1	162965531	162965566	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.1770
chr7	133416514	133416561	protein_coding	Sbk1	utr5	ENSMUSG00000042978	ProperStrand	24	chr2	158185576	158185653	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	6	-20.5805
chr7	52381719	52381773	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	chr8	32260372	32260424	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	2	-0.7241
chr11	69482352	69482396	snoRNA	ENSMUSG00000089542_snoU6-77	.	ENSMUSG00000089542	ProperStrand	138	chr3	123210906	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-0.8795
chr1	162968448	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	chr19	8800084	8800144	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-1.0719
chr2	25563070	25563086	antisense	A230005M16Rik	.	ENSMUSG00000087612	ProperStrand	103	mmu-miR-6240	3	25	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	1	-4.8519
chr7	52382097	52382197	protein_coding-noncoding	Rpl13a	utr3	ENSMUSG00000074129	ProperStrand	106	chr7	29963976	29964169	protein_coding	Psmd8	exon	ENSMUSG00000030591	ProperStrand	23	13	-19.1753
chr9	102774638	102774738	protein_coding	Ryk	intron	ENSMUSG00000032547	ProperStrand	25	chr2	26494708	26494753	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.7537
chr3	30717469	30717569	protein_coding	Sec62	exon	ENSMUSG00000027706	ProperStrand	12	chr1	89673766	89673786	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-6.3904
chr5	5007299	5007315	protein_coding	Cdk14	intron	ENSMUSG00000028926	NonProperStrand	23	chr18	75161533	75161555	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-9.1322
chr3	85943098	85943159	protein_coding	Rps3a	exon	ENSMUSG00000028081	ProperStrand	177	chr14	76247785	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-2.2344
chr2	75515069	75515139	protein_coding	Nfe2l2	exon	ENSMUSG00000015839	ProperStrand	24	chrX	34622906	34622979	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	3	-11.7029
chr7	59117430	59117489	protein_coding-noncoding	Gas2	utr5	ENSMUSG00000030498	ProperStrand	1	chr2	84979459	84979476	protein_coding	Aplnr	utr3	ENSMUSG00000044338	ProperStrand	13	1	-inf
chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	3	-4.1580
chr11	3426352	3426368	protein_coding	Smtn	exon	ENSMUSG00000020439	ProperStrand	222	chr9	78326624	78326645	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-3.8142
chr7	17002210	17018369	protein_coding	Zc3h4	exon	ENSMUSG00000059273	ProperStrand	95	chr4	131908753	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-1.4066
chr5	5537678	5537695	protein_coding	Gtpbp10	utr3	ENSMUSG00000040464	ProperStrand	6	chrX	103395908	103395998	protein_coding	Pgk1	intron	ENSMUSG00000062070	NonProperStrand	2	1	-inf
chr17	24615989	24616006	protein_coding	Mlst8	utr5	ENSMUSG00000024142	NonProperStrand	40	chr15	79908971	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-6.2710
chrX	59544048	59544066	protein_coding	4933402E13Rik	exon	ENSMUSG00000045330	NonProperStrand	6	chr5	130295415	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-9.9551
chr11	86062815	86062838	protein_coding	Ints2	exon	ENSMUSG00000018068	ProperStrand	17	chr11	77994815	77994864	snoRNA	ENSMUSG00000064540_Snord42a	.	ENSMUSG00000064540	ProperStrand	142	1	-14.1504
chr4	99577397	99577413	protein_coding	Itgb3bp	intron	ENSMUSG00000028549	ProperStrand	55	chr16	23111694	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-3.6932
chr8	108703450	108703558	protein_coding	Slc7a6	exon	ENSMUSG00000031904	ProperStrand	22	chr16	23111470	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.8747
chr9	16617694	16617784	LINE	Lx	L1	chr9Lx16617338	ProperStrand	1	chr10	24997078	24997158	protein_coding	Akap7	intron	ENSMUSG00000039166	ProperStrand	11	1	-inf
chr6	47882414	47882430	protein_coding	Zfp212	utr3	ENSMUSG00000052763	ProperStrand	20	chr2	26494708	26494816	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.1919
chr13	3556200	3556238	protein_coding	Gdi2	exon	ENSMUSG00000021218	ProperStrand	49	chr4	131908358	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.7204
chr7	117458503	117458521	protein_coding	Sbf2	exon	ENSMUSG00000038371	NonProperStrand	5	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-10.3212
chr14	123711222	123711240	protein_coding	Nalcn	intron	ENSMUSG00000000197	ProperStrand	7	chr1	72898770	72898828	protein_coding	Igfbp2	utr3	ENSMUSG00000039323	ProperStrand	406	1	-13.9082
chr3	68839753	68839816	protein_coding	Trim59	utr3	ENSMUSG00000034317	ProperStrand	22	chr10	110918603	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-5.3693
chr3	132668621	132725575	protein_coding	Gstcd	exon	ENSMUSG00000028018	ProperStrand	4	chr4	131908379	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-6.5415
chrX	151648215	151648278	protein_coding	Sat1	intron	ENSMUSG00000025283	ProperStrand	4	chr16	23110913	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.6489
chr3	95462988	95463078	protein_coding	Mcl1	exon	ENSMUSG00000038612	ProperStrand	75	chr4	131908299	131908350	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-2.1737
chr5	54389948	54389964	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	chr7	135031145	135031162	protein_coding	Prss53	exon	ENSMUSG00000044139	ProperStrand	9	1	-14.6626
chr19	4453915	4453932	protein_coding	Syt12	exon	ENSMUSG00000049303	ProperStrand	1	chr18	35716733	35716823	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-inf
chr11	116016097	116016113	protein_coding	Fbf1	exon	ENSMUSG00000020776	NonProperStrand	36	chr2	91436266	91436337	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-8.5213
chr13	9833553	9833681	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr13	8766290	8766307	protein_coding	Adarb2	utr3	ENSMUSG00000052551	ProperStrand	292	1	-2.0877
chr16	14391507	14413336	protein_coding	Abcc1	exon	ENSMUSG00000023088	ProperStrand	35	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-2.9161
chr14	55262890	55262990	protein_coding	Acin1	exon	ENSMUSG00000022185	ProperStrand	67	chr3	152450609	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	1	-8.5833
chr14	34780922	34781012	protein_coding	Zfp488	utr3	ENSMUSG00000044519	ProperStrand	54	chr13	67807711	67807801	protein_coding	Zfp71-rs1	utr3	ENSMUSG00000071281	NonProperStrand	7	1	-18.1562
chr5	74489214	74489326	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr10	6063958	6063979	protein_coding	Akap12	intron	ENSMUSG00000038587	ProperStrand	1008	1	-0.8288
chr3	75944776	75944799	protein_coding	Fstl5	intron	ENSMUSG00000034098	NonProperStrand	4	chr16	11144153	11144276	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	1	-16.1302
chr7	99817107	99817142	protein_coding	Pcf11	intron	ENSMUSG00000041328	ProperStrand	27	chr19	8963096	8963166	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.6995
chr11	6519810	6519858	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	chr13	51743567	51743663	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-1.8851
chr18	75160711	75160746	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	chr12	106269284	106269401	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	2	-1.6535
chrX	71517860	71517960	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	chr18	35102297	35102342	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-0.7423
chrX	90994217	90994234	protein_coding	Pcyt1b	utr3	ENSMUSG00000035246	ProperStrand	15	chr16	23110454	23110538	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.0488
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr19	46159836	46159924	protein_coding	Nolc1	utr3	ENSMUSG00000015176	ProperStrand	53	1	-6.1480
chr2	57191371	57192484	protein_coding	Gpd2	exon	ENSMUSG00000026827	ProperStrand	93	chr4	131865933	131865974	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.1370
chr4	136038221	136038307	protein_coding	Luzp1	intron	ENSMUSG00000001089	ProperStrand	35	chr11	62418045	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-6.6221
chr1	36161409	36161427	protein_coding	Hs6st1	utr3	ENSMUSG00000045216	ProperStrand	63	chr16	23110902	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-0.7310
chr2	41199972	41199989	protein_coding	Lrp1b	exon	ENSMUSG00000049252	ProperStrand	376	chr12	20902535	20902630	pseudogene	3110053B16Rik	.	ENSMUSG00000085642	ProperStrand	7	6	-20.5576
chr10	21088574	21088633	protein_coding	Hbs1l	utr3	ENSMUSG00000019977	ProperStrand	27	chr15	82980134	82980225	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-8.7424
chr9	110458809	110458845	protein_coding	Setd2	exon	ENSMUSG00000044791	ProperStrand	51	chr15	59309474	59309492	protein_coding	Nsmce2	intron	ENSMUSG00000059586	NonProperStrand	3	1	-inf
chr15	99239259	99240259	protein_coding	Tmbim6	utr3	ENSMUSG00000023010	ProperStrand	64	chr4	131908720	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-3.5594
chr8	85847714	85847804	protein_coding	Elmod2	utr5	ENSMUSG00000035151	NonProperStrand	1	chr15	72824945	72825025	protein_coding	Trappc9	intron	ENSMUSG00000047921	ProperStrand	44	1	-inf
chr5	110587914	110587931	lincRNA	Gm15787	intron	ENSMUSG00000086247	ProperStrand	5	chr9	78327840	78327890	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-11.4728
chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	chr18	35716684	35716761	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-2.7859
chr5	118450400	118450500	protein_coding	Fbxo21	exon	ENSMUSG00000032898	ProperStrand	34	chr11	55296276	55296333	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-7.3099
chr15	34370545	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	chr2	91436233	91436336	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	12	-6.5252
chr2	90235294	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr18	82773672	82773688	protein_coding	Zfp236	exon	ENSMUSG00000041258	NonProperStrand	117	2	-5.5166
chr12	21337945	21338000	protein_coding	Adam17	exon	ENSMUSG00000052593	ProperStrand	20	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.3737
chr6	29518928	29521038	protein_coding	Tnpo3	exon	ENSMUSG00000012535	ProperStrand	58	chr7	116663634	116663743	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-4.5219
chr5	104267855	104267923	protein_coding	Aff1	intron	ENSMUSG00000029313	ProperStrand	82	chr2	42028707	42028723	protein_coding	Lrp1b	intron	ENSMUSG00000049252	NonProperStrand	39	1	-13.5550
chr11	54683945	54683998	protein_coding	Hint1	utr3	ENSMUSG00000020267	ProperStrand	11	chr5	108334195	108334285	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	2	-13.2256
chr10	46519481	46519543	LTR	ORR1B2	MaLR	chr10ORR1B246519412	ProperStrand	4	chr4	131908697	131908753	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-inf
chrX	18252101	18252191	LINE	L1_Mm	L1	chrXL1_Mm18250588	ProperStrand	1	chrX	18252383	18252473	LTR	RMER17C	ERVK	chrXRMER17C18252333	NonProperStrand	1	1	-inf
chrX	69467458	69467475	protein_coding	Magea4	exon	ENSMUSG00000033343	NonProperStrand	8	chr19	44188458	44188548	snoRNA	ENSMUSG00000077391_SNORA12	.	ENSMUSG00000077391	ProperStrand	506	1	-13.1813
chr3	83732711	83734628	protein_coding	D930015E06Rik	exon	ENSMUSG00000033767	ProperStrand	17	chr11	116938557	116938637	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-8.6934
chr7	152024590	152024608	protein_coding	Fgf3	utr5	ENSMUSG00000031074	ProperStrand	2	chr1	141319671	141319687	protein_coding	Zbtb41	utr5	ENSMUSG00000033964	NonProperStrand	145	1	-19.0826
chr18	57549763	57549788	protein_coding	Prrc1	utr3	ENSMUSG00000024594	ProperStrand	22	chr17	24665444	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-6.9244
chr6	54379743	54379760	lincRNA	9130019P16Rik	exon	ENSMUSG00000073067	ProperStrand	255	chr3	88715213	88715230	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-4.4107
chr4	118288865	118288884	protein_coding	Wdr65	intron	ENSMUSG00000028730	NonProperStrand	5	chr7	35005925	35012150	protein_coding	Gpi1	exon	ENSMUSG00000036427	ProperStrand	288	1	-15.3326
chr14	55195940	55195992	protein_coding	Jub	exon	ENSMUSG00000022178	ProperStrand	25	chr5	121655102	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.4318
chr2	26493382	26493484	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr7	67123696	67123730	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	2	-1.5806
chr2	119783930	119784030	protein_coding	Mga	exon	ENSMUSG00000033943	ProperStrand	180	chr7	52381719	52381757	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-5.4090
chr4	129195048	129195138	protein_coding	Hdac1	exon	ENSMUSG00000028800	ProperStrand	49	chr4	131908267	131908347	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.7204
chr1	34247719	34249009	protein_coding	Dst	utr5	ENSMUSG00000026131	ProperStrand	461	chr1	162967515	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-1.0447
chr19	6373619	6377058	protein_coding	Sf1	exon	ENSMUSG00000024949	ProperStrand	251	chr5	130300442	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	7	-6.9564
chr3	89539846	89539870	protein_coding	Adar	exon	ENSMUSG00000027951	ProperStrand	52	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-7.2093
chr9	53309077	53311052	protein_coding	Atm	exon	ENSMUSG00000034218	ProperStrand	17	chr14	49126840	49126856	protein_coding	6720456H20Rik	exon	ENSMUSG00000036339	ProperStrand	28	1	-17.3745
chr2	75670359	75670377	protein_coding	Agps	exon	ENSMUSG00000042410	NonProperStrand	9	chr2	26494763	26494827	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-6.8145
chr4	87979762	87979778	protein_coding	BC057079	intron	ENSMUSG00000038368	NonProperStrand	6	chr4	116828379	116828452	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-13.1394
chr1	181677355	181677387	protein_coding	Ahctf1	exon	ENSMUSG00000026491	ProperStrand	39	chr9	120037931	120038031	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-5.5437
chr6	33868576	33871391	protein_coding	Exoc4	exon	ENSMUSG00000029763	ProperStrand	120	chr15	77356785	77356801	protein_coding	Apol7c	exon	ENSMUSG00000044309	ProperStrand	197	1	-9.5380
chr7	151647180	151649235	protein_coding	Cttn	exon	ENSMUSG00000031078	ProperStrand	33	chr16	23110491	23110526	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-6.0263
chr18	10052129	10052153	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	2	-5.7442
chr7	17040701	17040717	protein_coding	Tmem160	exon	ENSMUSG00000019158	ProperStrand	55	chr2	4812729	4814272	protein_coding	Sephs1	exon	ENSMUSG00000026662	ProperStrand	20	1	-15.6859
chr7	36401875	36401905	protein_coding	Ankrd27	exon	ENSMUSG00000034867	ProperStrand	132	chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	1	-7.9126
chr8	13416896	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr5	108336409	108336490	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	4	-0.9695
chr19	6984448	6984464	protein_coding	Prdx5	utr5	ENSMUSG00000024953	ProperStrand	24	chr4	131908236	131908417	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-5.1018
chr6	94776849	94776876	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	chr18	33954816	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-0.9683
chr10	80267018	80267099	protein_coding	Sf3a2	exon	ENSMUSG00000020211	ProperStrand	50	chr9	15119676	15119766	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.9502
chr11	105799170	105799250	protein_coding	Cyb561	intron	ENSMUSG00000019590	ProperStrand	13	chr5	121655016	121655106	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-6.7475
chr11	113716217	113716236	protein_coding	Sdk2	intron	ENSMUSG00000041592	ProperStrand	17	chr8	73419703	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-9.1331
chr3	19892533	19892552	protein_coding	Cp	utr3	ENSMUSG00000003617	ProperStrand	1	chr18	48207437	48207495	protein_coding	Gm5506	exon	ENSMUSG00000059040	ProperStrand	105	1	-inf
chr13	52742450	52742466	protein_coding	Syk	utr3	ENSMUSG00000021457	NonProperStrand	125	chr1	162966813	162966836	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-4.8278
chr18	38469309	38469326	protein_coding	Rnf14	exon	ENSMUSG00000060450	NonProperStrand	9	chr14	33005139	33005239	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	6	-20.2624
chr6	70794801	70794819	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chr2	158203999	158204093	snoRNA	ENSMUSG00000065840_SNORA71	.	ENSMUSG00000065840	ProperStrand	107	1	-10.2598
chr2	28368846	28368862	protein_coding	Ralgds	utr5	ENSMUSG00000026821	ProperStrand	14	chr4	131865867	131865937	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.3681
chr14	80262508	80262524	lincRNA	Gm6999	intron	ENSMUSG00000075495	ProperStrand	265	chr8	108369639	108369685	protein_coding	Cenpt	intron	ENSMUSG00000036672	ProperStrand	13	1	-13.4528
chr8	125093841	125093874	protein_coding	Cdt1	exon	ENSMUSG00000006585	ProperStrand	47	chr8	73419657	73419729	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.5766
chr15	96063288	96063304	lincRNA	4833422M21Rik	exon	ENSMUSG00000085460	NonProperStrand	37	chr10	5992496	5992616	protein_coding	Akap12	exon	ENSMUSG00000038587	ProperStrand	1008	1	-8.6452
chr12	36883254	36883344	protein_coding	Bzw2	utr5	ENSMUSG00000020547	ProperStrand	29	chr18	35714183	35714263	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.8207
chrX	7507946	7508036	protein_coding	Hdac6	exon	ENSMUSG00000031161	ProperStrand	42	chr8	73419707	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	5	-15.9000
chr2	25993177	25993267	lincRNA	C330006A16Rik	exon	ENSMUSG00000087679	ProperStrand	6	chr10	127876751	127876841	protein_coding	Rnf41	utr3	ENSMUSG00000025373	NonProperStrand	5	1	-19.0115
chr11	116099379	116099395	protein_coding	Evpl	utr5	ENSMUSG00000034282	ProperStrand	33	chr1	162967517	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.6031
chr8	73292120	73292220	protein_coding	Pik3r2	utr3	ENSMUSG00000031834	ProperStrand	22	chr11	98878344	98878413	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-8.2945
chr16	54679541	54679559	LTR	MYSERV16_I-int	ERVK	chr16MYSERV16_I-int54679027	NonProperStrand	31	chr2	120555441	120555484	protein_coding	Cdan1	exon	ENSMUSG00000027284	ProperStrand	13	1	-17.4983
chr7	3851121	3851211	LINE	L1_Mur1	L1	chr7L1_Mur13851112	NonProperStrand	1	chr7	3850932	3851012	LINE	Lx2A	L1	chr7Lx2A3850791	NonProperStrand	1	1	-inf
chr15	99077483	99077734	protein_coding	Mcrs1	exon	ENSMUSG00000037570	ProperStrand	46	chr16	23111451	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-3.0586
chr2	26493441	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr5	66456897	66456914	protein_coding	Rbm47	intron	ENSMUSG00000070780	ProperStrand	13	1	-9.2824
chr19	6368363	6371290	protein_coding	Sf1	exon	ENSMUSG00000024949	ProperStrand	251	chr13	23528215	23528284	tRNA	tRNA103-LysCTT	.	578187	ProperStrand	180	4	-19.2603
chr12	55796767	55796784	protein_coding	Eapp	utr5	ENSMUSG00000054302	NonProperStrand	62	chr14	33005094	33005135	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-3.9320
chr5	104735049	104738296	protein_coding	Ibsp	exon	ENSMUSG00000029306	ProperStrand	15	chr4	56910496	56910614	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-8.8973
chr9	57376875	57378133	protein_coding	Cox5a	exon	ENSMUSG00000000088	ProperStrand	26	chrX	98794743	98794823	protein_coding	Taf1	exon	ENSMUSG00000031314	ProperStrand	61	1	-14.9701
chr8	87541913	87542003	protein_coding	Asna1	utr3	ENSMUSG00000052456	ProperStrand	25	chr7	148634751	148634831	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-5.6811
chr7	87455631	87455731	protein_coding	Prc1	exon	ENSMUSG00000038943	ProperStrand	35	chr2	158182157	158182200	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-6.0591
chr2	131059958	131059976	protein_coding	Mavs	utr5	ENSMUSG00000037523	NonProperStrand	7	chr7	16524111	16524179	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	1	-14.1504
chrX	7752870	7752886	protein_coding	Tbc1d25	exon	ENSMUSG00000039201	ProperStrand	126	chr3	95980330	95980359	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-5.3990
chr7	13892950	13893005	protein_coding	Lig1	exon	ENSMUSG00000056394	ProperStrand	89	chr2	91436286	91436335	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	5	-inf
chr4	116477766	116477826	protein_coding	Toe1	exon	ENSMUSG00000028688	ProperStrand	3	chr4	131908810	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-6.9471
chr8	85690577	85690632	protein_coding	Tbc1d9	intron	ENSMUSG00000031709	ProperStrand	66	chr9	15118247	15118374	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	3	-8.2787
chr4	128971157	128971247	protein_coding	Sync	exon	ENSMUSG00000001333	NonProperStrand	2	chr9	120039580	120039660	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-inf
chr3	68848571	68848611	protein_coding	Trim59	utr5	ENSMUSG00000034317	ProperStrand	22	chr4	131908806	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-10.1618
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr16	87731110	87731126	protein_coding	Bach1	utr3	ENSMUSG00000025612	ProperStrand	32	1	-7.1521
chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	chr8	86621130	86621167	protein_coding	Dcaf15	utr3	ENSMUSG00000037103	ProperStrand	32	1	-10.0957
chrX	148059943	148059961	protein_coding	Phf8	utr3	ENSMUSG00000041229	ProperStrand	17	chr10	110918592	110918682	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-5.8838
chr19	8798780	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	chr1	129228419	129228519	snoRNA	ENSMUSG00000093146_AC131793.1	.	ENSMUSG00000093146	ProperStrand	119	1	-3.5103
chr5	151755614	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr1	88252836	88252896	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-1.5588
chr17	35287834	35289592	protein_coding	Prrc2a	exon	ENSMUSG00000024393	ProperStrand	315	chr2	4974190	4974207	protein_coding	Optn	exon	ENSMUSG00000026672	ProperStrand	451	1	-5.9833
chr8	112665293	112665312	protein_coding	Calb2	intron	ENSMUSG00000003657	ProperStrand	55	chr13	96100709	96100809	protein_coding	Zbed3	intron	ENSMUSG00000041995	NonProperStrand	2	1	-inf
chr4	131908365	131908460	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr1	133252344	133252405	protein_coding	Srgap2	intron	ENSMUSG00000026425	ProperStrand	299	1	-4.1344
chr2	11524761	11524834	protein_coding	Rbm17	utr5	ENSMUSG00000037197	ProperStrand	50	chr1	162967489	162967557	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-6.4446
chr1	88247820	88247876	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	chr14	52829459	52829484	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-0.8221
chr17	24858080	24858184	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr5	74489622	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-0.8589
chr6	143153880	143153982	protein_coding	Etnk1	utr3	ENSMUSG00000030275	ProperStrand	61	chr11	68887042	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-4.1127
chr3	101961372	101961419	protein_coding	Vangl1	utr3	ENSMUSG00000027860	ProperStrand	25	chr7	30026273	30026289	protein_coding	Yif1b	intron	ENSMUSG00000030588	ProperStrand	154	1	-13.1957
chr18	82662186	82662202	protein_coding	Mbp	intron	ENSMUSG00000041607	NonProperStrand	185	chrX	34622931	34622958	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-1.3328
chr11	69730265	69732790	protein_coding	Eif5a	exon	ENSMUSG00000078812	ProperStrand	164	chr9	15119303	15119425	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	2	-5.5111
chr6	45494576	45494594	protein_coding	Cntnap2	intron	ENSMUSG00000039419	NonProperStrand	283	chr8	32260349	32260426	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-1.8675
chr6	115758010	115758100	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr10	30530941	30531021	tRNA	tRNA81-GluCTC	.	849387	ProperStrand	154	1	-3.6746
chr18	70728457	70728547	protein_coding	Mbd2	utr5	ENSMUSG00000024513	ProperStrand	10	chr4	131865386	131865466	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-7.5608
chr16	91729699	91729723	protein_coding	Itsn1	utr5	ENSMUSG00000022957	ProperStrand	172	chr16	23110455	23110584	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-2.9536
chr4	131865855	131865988	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chrX	71517838	71517962	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	24	-1.2060
chr19	23994480	23994571	protein_coding	Apba1	intron	ENSMUSG00000024897	NonProperStrand	12	chr14	13326357	13326378	protein_coding	Cadps	intron	ENSMUSG00000054423	ProperStrand	32	1	-17.6497
chr8	64017614	64028377	protein_coding	Palld	exon	ENSMUSG00000058056	NonProperStrand	125	chr7	116664852	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-4.1180
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr1	90123798	90124639	protein_coding	Heatr7b1	utr5	ENSMUSG00000079429	ProperStrand	147	1	-9.5729
chr4	101313746	101313772	protein_coding	Dnajc6	utr3	ENSMUSG00000028528	ProperStrand	10	chrX	7544961	7544977	protein_coding	Gata1	utr5	ENSMUSG00000031162	ProperStrand	30	1	-18.5490
chr9	64023947	64023994	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	chr13	96100552	96100652	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	4	-11.7996
chr16	14191018	14191037	protein_coding	Nde1	intron	ENSMUSG00000022678	ProperStrand	23	chr5	130300476	130300551	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.2653
chr10	17443077	17443096	protein_coding	Cited2	utr5	ENSMUSG00000039910	ProperStrand	64	chr17	24665433	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	2	-7.9668
chr7	3658289	3658337	protein_coding	Rps9	exon	ENSMUSG00000006333	ProperStrand	87	chr18	33954842	33954932	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-2.8358
chr12	87865704	87865722	SINE	RSINE1	B4	chr12RSINE187865630	ProperStrand	36	chr9	120038552	120038664	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-6.7138
chr13	30228418	30228435	protein_coding	Mboat1	utr5	ENSMUSG00000038732	NonProperStrand	148	chr7	56130389	56130480	protein_coding	E2f8	exon	ENSMUSG00000046179	ProperStrand	2	1	-18.6767
chr18	35714216	35714294	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	chr14	52829477	52829567	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	4	-1.2322
chr8	14499468	14499487	protein_coding	Dlgap2	intron	ENSMUSG00000047495	NonProperStrand	23	chr17	13115655	13115713	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	1	-9.4652
chr1	34873572	34873637	protein_coding	Fam168b	utr3	ENSMUSG00000037503	ProperStrand	23	chr9	15118324	15118379	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-5.3004
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr5	20456871	20456888	protein_coding	Rsbn1l	intron	ENSMUSG00000039968	ProperStrand	17	1	-11.3976
chr15	103176423	103177017	protein_coding	Itga5	exon	ENSMUSG00000000555	ProperStrand	28	chr9	120038023	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	2	-10.0905
chr1	181685742	181688083	protein_coding	Ahctf1	exon	ENSMUSG00000026491	ProperStrand	39	chr5	115939512	115939612	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-8.7295
chr16	23110454	23110584	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	chr12	88778629	88778767	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	15	-0.8822
chr11	116535955	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr18	64660976	64661054	protein_coding	Nars	exon	ENSMUSG00000024587	ProperStrand	97	1	-4.9745
chr4	147991534	147992634	protein_coding	Tardbp	utr3	ENSMUSG00000041459	ProperStrand	120	chr3	123210854	123210933	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	4	-4.7998
chr14	52723595	52723654	protein_coding	Hnrnpc	utr5	ENSMUSG00000060373	ProperStrand	75	chr4	116827119	116827142	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-6.5977
chr8	73223056	73223075	protein_coding	Jund	exon	ENSMUSG00000071076	ProperStrand	50	chr5	121655040	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.0898
chr11	6519824	6519914	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	chr11	116938663	116938742	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-1.3535
chr11	53233810	53233843	protein_coding	Aff4	utr3	ENSMUSG00000049470	ProperStrand	94	chr19	8963032	8963048	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-9.2549
chr9	44192933	44193013	protein_coding	Hyou1	exon	ENSMUSG00000032115	ProperStrand	145	chr14	28277350	28277440	protein_coding	D14Abb1e	exon	ENSMUSG00000040651	ProperStrand	49	2	-18.9339
chr2	84886581	84886804	protein_coding	Ssrp1	exon	ENSMUSG00000027067	ProperStrand	118	chr11	95236944	95236986	protein_coding	Fam117a	exon	ENSMUSG00000038893	ProperStrand	18	1	-14.3984
chr7	109047726	109047762	protein_coding	3200002M19Rik	utr3	ENSMUSG00000030649	ProperStrand	22	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-9.0820
chr13	44964973	44965043	protein_coding	Jarid2	intron	ENSMUSG00000038518	ProperStrand	372	chr16	23110903	23111003	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	NonProperStrand	93	1	-8.7801
chr8	126562269	126565102	protein_coding	Urb2	exon	ENSMUSG00000031976	ProperStrand	64	chr17	39985149	39985177	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-5.8053
chr2	73688665	73688681	protein_coding	Atf2	exon	ENSMUSG00000027104	ProperStrand	37	chr4	131908235	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-5.9391
chr19	4126112	4127058	processed_transcript	Tmem134	.	ENSMUSG00000024845	ProperStrand	3	chr5	74489598	74489678	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-10.0122
chr4	143748332	143749010	protein_coding	Oog3	exon	ENSMUSG00000050810	NonProperStrand	78	chr18	35716806	35716878	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.7505
chr10	47216585	47216675	LINE	L1_Mus3	L1	chr10L1_Mus347216559	ProperStrand	1	chr10	47216759	47216839	LINE	L1_Mus3	L1	chr10L1_Mus347216770	NonProperStrand	1	1	-inf
chr9	114384846	114384936	SINE	B4A	B4	chr9B4A114384781	NonProperStrand	1	chr5	117798591	117798671	protein_coding	Vsig10	intron	ENSMUSG00000066894	NonProperStrand	9	1	-inf
chr7	136800631	136800649	SINE	RSINE1	B4	chr7RSINE1136800606	ProperStrand	216	chr8	109060758	109060792	protein_coding	Cdh3	exon	ENSMUSG00000061048	ProperStrand	62	1	-10.6786
chr16	23112993	23113010	protein_coding	Eif4a2	utr3	ENSMUSG00000022884	NonProperStrand	3	chr19	8963126	8963165	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-8.3179
chr4	43505756	43505836	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr6	89057767	89057857	protein_coding	4933427D06Rik	exon	ENSMUSG00000055403	ProperStrand	12	1	-6.1793
chr12	112565198	112565215	protein_coding	Cdc42bpb	intron	ENSMUSG00000021279	ProperStrand	128	chr11	62416951	62416970	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-4.5720
chr2	166259687	166259796	SINE	B4A	B4	chr2B4A166259709	NonProperStrand	1	chr19	8799607	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-inf
chr5	22062491	22062581	lincRNA	6030443J06Rik	exon	ENSMUSG00000087558	ProperStrand	19	chr1	82725908	82725940	protein_coding	Mff	exon	ENSMUSG00000026150	ProperStrand	12	1	-19.6418
chr4	135567110	135567200	protein_coding	Tceb3	exon	ENSMUSG00000028668	ProperStrand	17	chr5	121655052	121655134	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-6.2021
chr16	34986602	34986618	protein_coding	Mylk	exon	ENSMUSG00000022836	NonProperStrand	56	chr10	23505150	23505277	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-4.0185
chr17	88385583	88385602	protein_coding	Msh6	exon	ENSMUSG00000005370	ProperStrand	150	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	1	-5.2276
chr10	109552124	109552214	LINE	Lx9	L1	chr10Lx9109551865	NonProperStrand	1	chr1	112047971	112048051	LINE	Lx	L1	chr1Lx112047936	ProperStrand	1	1	-inf
chr16	91227718	91227735	protein_coding	Olig2	utr3	ENSMUSG00000039830	NonProperStrand	78	chr1	162967535	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-2.9992
chr12	86562541	86562582	protein_coding	Eif2b2	exon	ENSMUSG00000004788	ProperStrand	15	chr4	131908356	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	6	-20.2081
chr6	134436540	134436640	protein_coding	Lrp6	exon	ENSMUSG00000030201	ProperStrand	42	chr17	27771036	27771094	protein_coding	Rps10	exon	ENSMUSG00000052146	ProperStrand	94	3	-19.4829
chr7	134731424	134731440	protein_coding	Gm166	exon	ENSMUSG00000057176	ProperStrand	22	chr8	129468746	129468866	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-6.3807
chr18	82662186	82662202	protein_coding	Mbp	intron	ENSMUSG00000041607	NonProperStrand	185	chr11	97643009	97643060	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-0.8229
chr10	80266739	80267037	protein_coding	Sf3a2	exon	ENSMUSG00000020211	ProperStrand	50	chr7	116663648	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-4.9294
chr17	34808913	34808930	protein_coding	Tnxb	exon	ENSMUSG00000033327	ProperStrand	36	chr7	16524110	16524219	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	1	-10.7483
chr2	89368462	89368478	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	chr2	26494708	26494818	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	6	-7.1683
chr8	122669441	122669457	protein_coding	6430548M08Rik	exon	ENSMUSG00000031824	ProperStrand	1	chr12	17552949	17553029	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-inf
chr8	127993731	127993748	protein_coding	Sipa1l2	exon	ENSMUSG00000001995	NonProperStrand	8	chr7	52381972	52382030	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-10.8292
chr4	140548080	140548097	protein_coding	Atp13a2	exon	ENSMUSG00000036622	ProperStrand	39	chr10	17547610	17547626	protein_coding	Txlnb	exon	ENSMUSG00000039891	ProperStrand	70	1	-13.8733
chr13	9833554	9833669	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr4	57868014	57868038	protein_coding	Gm20459	exon	ENSMUSG00000089945	ProperStrand	31	1	-6.2512
chr7	29171176	29171254	protein_coding	Med29	utr3	ENSMUSG00000003444	ProperStrand	6	chr9	63868722	63868738	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	1	-13.3404
chr6	30066219	30069067	protein_coding	Nrf1	exon	ENSMUSG00000058440	ProperStrand	22	chr11	97642952	97643038	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-10.5077
chr1	132742959	132742975	protein_coding	Pigr	exon	ENSMUSG00000026417	NonProperStrand	48	chr13	51743567	51743664	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-7.3044
chr5	143665356	143665826	protein_coding	Actb	utr3	ENSMUSG00000029580	ProperStrand	446	chr18	75161535	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	2	-5.6996
chr2	90235315	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	98546881	98546898	protein_coding	Psmd3	exon	ENSMUSG00000017221	NonProperStrand	4	1	-10.0500
chr8	121933362	121933379	protein_coding	Mlycd	intron	ENSMUSG00000074064	NonProperStrand	1	chr9	15119287	15119348	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-inf
chr15	101936679	101937266	protein_coding	Tenc1	exon	ENSMUSG00000037003	ProperStrand	6	chr16	23110940	23110964	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-14.1985
chr5	28398055	28404188	protein_coding	Insig1	exon	ENSMUSG00000045294	ProperStrand	35	chr16	23110885	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-4.3005
chr14	79827507	79827532	protein_coding	Kbtbd7	utr5	ENSMUSG00000043881	ProperStrand	3	chr1	162966203	162966253	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-13.9398
chr10	18393547	18393563	protein_coding	D10Bwg1379e	intron	ENSMUSG00000019852	NonProperStrand	120	chr18	35716834	35716865	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.1329
chr5	54046714	54046765	protein_coding	Rbpj	utr3	ENSMUSG00000039191	ProperStrand	96	chr12	112779247	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	2	-6.5393
chr9	21714668	21714730	protein_coding	Rab3d	utr3	ENSMUSG00000019066	ProperStrand	1	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	1	-inf
chr4	116826699	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	chr2	26768053	26768095	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	1	-2.1857
chr7	28051635	28051812	protein_coding	Numbl	exon	ENSMUSG00000063160	ProperStrand	35	chr15	95673614	95673704	protein_coding	Ano6	intron	ENSMUSG00000064210	ProperStrand	39	1	-15.2491
chr17	47075606	47075622	protein_coding	Ubr2	exon	ENSMUSG00000023977	ProperStrand	172	chr2	53075842	53075884	protein_coding	Arl6ip6	intron	ENSMUSG00000026960	ProperStrand	8	1	-15.3162
chr3	96074061	96074111	protein_coding	Hist2h2bb	intron	ENSMUSG00000050936	ProperStrand	57	chr9	7933465	7933488	protein_coding	Yap1	utr3	ENSMUSG00000053110	ProperStrand	68	2	-19.2117
chr4	3761764	3761810	protein_coding	Rps20	exon	ENSMUSG00000028234	ProperStrand	71	chr5	115940263	115940353	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	1	-8.3988
chr6	85171115	85171138	protein_coding	Sfxn5	intron	ENSMUSG00000033720	ProperStrand	26	chr16	23111447	23111501	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-4.5661
chr4	40208987	40209077	protein_coding	Topors	exon	ENSMUSG00000036822	ProperStrand	40	chr10	107800724	107800804	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	1	-8.8844
chr7	150646170	150646260	protein_coding	Cdkn1c	exon	ENSMUSG00000037664	ProperStrand	15	chr19	8963053	8963133	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	14	-inf
chr6	92192977	92193049	protein_coding	Trh	exon	ENSMUSG00000005892	ProperStrand	87	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-7.4380
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	ProperStrand	10	chr17	24856620	24856741	protein_coding	Rps2	intron	ENSMUSG00000044533	ProperStrand	373	1	-13.3181
chr4	140671484	140671617	protein_coding	D4Ertd22e	utr3	ENSMUSG00000040842	ProperStrand	23	chr1	63260754	63260770	protein_coding	Gpr1	utr5	ENSMUSG00000046856	NonProperStrand	32	1	-16.5231
chr19	11015616	11015632	protein_coding	Gpr44	exon	ENSMUSG00000034117	NonProperStrand	118	chr17	32270371	32270421	protein_coding	Notch3	exon	ENSMUSG00000038146	ProperStrand	181	1	-9.7409
chr16	57391725	57391746	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr12	60141375	60141508	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	NonProperStrand	2	1	-18.0561
chr3	104607249	104607424	protein_coding	Mov10	exon	ENSMUSG00000002227	ProperStrand	96	chr9	15118245	15118320	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-2.6272
chr13	74494657	74494675	protein_coding	Ccdc127	utr3	ENSMUSG00000021578	NonProperStrand	54	chr17	35088957	35089018	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	2	-9.8760
chr6	94776846	94776876	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	chr11	6428060	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	10	-9.3392
chr18	64548778	64548794	protein_coding	Onecut2	utr3	ENSMUSG00000045991	NonProperStrand	2	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-15.2057
chr15	72924049	72924149	protein_coding	Chrac1	utr3	ENSMUSG00000068391	ProperStrand	8	chr12	112779229	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-8.8438
chr8	13416897	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr2	120872244	120872260	protein_coding	Tgm5	exon	ENSMUSG00000053675	NonProperStrand	163	1	-4.5101
chr7	26082445	26082461	protein_coding	Pafah1b3	exon	ENSMUSG00000005447	ProperStrand	4	chr11	106362303	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-11.4809
chr2	28689960	28690007	protein_coding	Gtf3c4	exon	ENSMUSG00000035666	ProperStrand	14	chr18	82773672	82773688	protein_coding	Zfp236	exon	ENSMUSG00000041258	NonProperStrand	117	1	-14.9444
chr3	86595996	86597193	protein_coding	Dclk2	exon	ENSMUSG00000028078	ProperStrand	50	chr5	130300473	130300553	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	5	-12.7833
chr3	87689184	87689203	protein_coding	Prcc	exon	ENSMUSG00000004895	ProperStrand	38	chr17	35088970	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-6.7722
chr18	67650470	67650523	protein_coding	Spire1	utr3	ENSMUSG00000024533	ProperStrand	14	chr16	23110454	23110529	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.1866
chr12	52065319	52065336	LTR	RMER19B	ERVK	chr12RMER19B52064992	NonProperStrand	1	chr10	23505260	23505279	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-inf
chr1	145645579	145647065	protein_coding	Uchl5	exon	ENSMUSG00000018189	ProperStrand	15	chr8	67522508	67522525	protein_coding	Trim60	utr3	ENSMUSG00000053490	ProperStrand	17	1	-19.0158
chr11	48614367	48614434	snoRNA	ENSMUSG00000064500_SNORD95	.	ENSMUSG00000064500	ProperStrand	100	chr11	97642985	97643075	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	7	-13.2884
chr5	65808164	65814802	protein_coding	Ugdh	exon	ENSMUSG00000029201	ProperStrand	14	chr3	123210854	123210919	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	6	-22.3906
chr2	26494801	26494881	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr10	59762776	59762955	protein_coding	Psap	exon	ENSMUSG00000004207	ProperStrand	124	1	-4.7804
chr14	76247679	76247759	protein_coding	Tpt1	intron	ENSMUSG00000060126	ProperStrand	236	chr14	76247738	76247828	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-1.7741
chr10	79325465	79325517	protein_coding	Ptbp1	exon	ENSMUSG00000006498	ProperStrand	129	chr16	23110563	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.2706
chr11	4224147	4224237	snRNA	ENSMUSG00000065627_U6	.	ENSMUSG00000065627	ProperStrand	1	chr16	23111420	23111500	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-inf
chr19	5719336	5719352	protein_coding	Ehbp1l1	exon	ENSMUSG00000024937	ProperStrand	75	chr1	71652489	71652533	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	1	-7.3882
chr18	65587318	65587345	misc_RNA	AC102240.1	.	ENSMUSG00000093283	ProperStrand	7	chr12	17552948	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-9.4553
chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	chr2	91436228	91436260	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-1.6357
chr17	24857696	24857776	protein_coding-noncoding	Rps2	utr5	ENSMUSG00000044533	ProperStrand	29	chr14	61966219	61979087	protein_coding	Ebpl	exon	ENSMUSG00000021928	ProperStrand	3	1	-inf
chr19	56949000	56949016	protein_coding	Vwa2	utr5	ENSMUSG00000025082	NonProperStrand	9	chr17	23952239	23952262	protein_coding	Srrm2	exon	ENSMUSG00000039218	ProperStrand	521	1	-12.8730
chr15	94416715	94416736	protein_coding	Twf1	intron	ENSMUSG00000022451	ProperStrand	32	chr6	115757991	115758062	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-6.7146
chr7	30231466	30231556	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	chr11	97642996	97643081	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	10	-5.0478
chr8	5640253	5640270	protein_coding	Gm1840	exon	ENSMUSG00000043192	NonProperStrand	6	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-13.6880
chr9	30974558	30974681	protein_coding	Aplp2	intron	ENSMUSG00000031996	ProperStrand	172	chr1	162967544	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-3.1023
chr18	36843334	36843421	protein_coding	Slc35a4	utr3	ENSMUSG00000033272	ProperStrand	10	chr10	23505152	23505184	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-10.8346
chr11	88794926	88794988	protein_coding	Scpep1	intron	ENSMUSG00000000278	ProperStrand	54	chr4	131908236	131908319	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.5731
chr2	105502592	105502610	antisense	Pax6os1	.	ENSMUSG00000086029	NonProperStrand	4	chr5	74489595	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-9.3217
chr6	115757992	115758100	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr7	148634701	148634827	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	12	-1.2709
chr13	23677717	23677788	protein_coding	Hist1h2be	exon	ENSMUSG00000047246	ProperStrand	20	chr17	43593019	43593036	protein_coding	Gpr116	utr3	ENSMUSG00000056492	ProperStrand	14	1	-19.5947
chr18	82773672	82773688	protein_coding	Zfp236	exon	ENSMUSG00000041258	NonProperStrand	117	chr11	106362556	106362643	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	2	-9.8734
chr17	53071061	53071078	LINE	L1_Mus4	L1	chr17L1_Mus453067946	NonProperStrand	21	chr17	35299507	35299561	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-6.8500
chr4	131908357	131908458	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr7	146684406	146684425	protein_coding	Inpp5a	intron	ENSMUSG00000025477	ProperStrand	166	1	-5.2582
chr4	123161280	123161338	protein_coding	Macf1	exon	ENSMUSG00000028649	ProperStrand	320	chr2	158185574	158185655	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-3.2856
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	2	-7.9921
chr11	84136044	84151818	protein_coding	Acaca	exon	ENSMUSG00000020532	ProperStrand	100	chr15	79913286	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.6749
chr13	73951075	73952372	protein_coding	Slc12a7	exon	ENSMUSG00000017756	ProperStrand	80	chr9	63868722	63868738	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	1	-8.0115
chr11	6428038	6428117	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr2	158204035	158204093	snoRNA	ENSMUSG00000065840_SNORA71	.	ENSMUSG00000065840	ProperStrand	107	5	-10.5475
chr12	17285675	17286438	protein_coding	Pdia6	exon	ENSMUSG00000020571	ProperStrand	114	chr15	5068442	5068480	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	2	-7.9583
chr10	127098076	127098661	protein_coding	Nab2	utr3	ENSMUSG00000025402	NonProperStrand	7	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-9.6520
chrX	45973544	45973634	LINE	Lx8	L1	chrXLx845973546	ProperStrand	1	chrX	45973389	45973469	LTR	ORR1A4	MaLR	chrXORR1A445973202	ProperStrand	1	1	-inf
chr7	123683442	123683476	protein_coding	Nucb2	intron	ENSMUSG00000030659	ProperStrand	1	chr11	62416602	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-inf
chr5	100855912	100855974	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	NonProperStrand	3	chr10	23505151	23505238	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	NonProperStrand	45	2	-inf
chr4	24555744	24555763	protein_coding	Klhl32	intron	ENSMUSG00000040387	ProperStrand	67	chr10	23505152	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-3.4353
chr8	28338094	28338110	protein_coding	Adrb3	exon	ENSMUSG00000031489	NonProperStrand	2	chr16	23111374	23111463	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-8.0851
chr2	89368462	89368480	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	chr7	29136613	29136653	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	5	-3.6278
chr2	118587121	118587385	protein_coding	A430105I19Rik	exon	ENSMUSG00000045838	ProperStrand	37	chrX	84483693	84483715	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	2	-14.6275
chr1	192712615	192712631	protein_coding	Rps6kc1	exon	ENSMUSG00000089872	ProperStrand	241	chr2	22444517	22444540	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-5.0418
chr12	17552963	17553063	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr9	64024974	64024998	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	1	-1.4278
chr8	83233066	83233585	protein_coding	Smarca5	exon	ENSMUSG00000031715	ProperStrand	115	chr9	120039583	120039663	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.1854
chr11	88798332	88802643	protein_coding	Scpep1	exon	ENSMUSG00000000278	ProperStrand	54	chr16	23111372	23111463	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-2.6689
chr7	53296847	53339277	protein_coding	Nomo1	exon	ENSMUSG00000030835	ProperStrand	85	chr16	23110829	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-2.8045
chr3	62297748	62297764	protein_coding	Dhx36	exon	ENSMUSG00000027770	NonProperStrand	5	chr1	162967516	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	4	-19.2238
chr1	138046608	138046625	protein_coding	Kif21b	intron	ENSMUSG00000041642	ProperStrand	77	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.8297
chr6	145564547	145564563	protein_coding	Tuba3b	utr5	ENSMUSG00000067338	ProperStrand	152	chr18	75161108	75161135	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	1	-7.1683
chr13	76193665	76193681	protein_coding	Gpr150	exon	ENSMUSG00000045509	NonProperStrand	63	chr16	23110527	23110563	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.3788
chr2	22445069	22445105	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	chr7	52381973	52382013	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-1.6408
chr16	23111803	23111837	protein_coding	Eif4a2	intron	ENSMUSG00000022884	ProperStrand	356	chr15	79913292	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	3	-2.6838
chr9	64023678	64023741	snoRNA	ENSMUSG00000064918_SNORD18	.	ENSMUSG00000064918	ProperStrand	370	chr7	150717298	150717344	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	8	-17.9605
chr4	118781440	118781497	protein_coding	Slc2a1	utr5	ENSMUSG00000028645	ProperStrand	361	chr4	116827120	116827181	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	4	-11.8153
chr3	38351305	38382197	protein_coding	Ankrd50	utr5	ENSMUSG00000044864	ProperStrand	36	chr16	23110905	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-7.4626
chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	chr4	116826559	116826922	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	1	-6.3400
chr11	121157519	121158300	protein_coding	Foxk2	exon	ENSMUSG00000039275	ProperStrand	38	chr11	97642989	97643069	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.2805
chr18	36700414	36700431	protein_coding	Slc4a9	exon	ENSMUSG00000024485	ProperStrand	13	chr10	90581034	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	4	-inf
chr8	125626932	125626987	snoRNA	ENSMUSG00000064450_Snord68	.	ENSMUSG00000064450	ProperStrand	181	chr9	120038024	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-2.6726
chr9	88351461	88351561	protein_coding	Syncrip	exon	ENSMUSG00000032423	ProperStrand	35	chr1	162965989	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-7.6940
chr2	38195118	38195141	protein_coding	Lhx2	utr5	ENSMUSG00000000247	ProperStrand	9	chr4	131908731	131908808	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.5343
chr5	34073982	34073999	protein_coding	Fgfr3	exon	ENSMUSG00000054252	ProperStrand	13	chr6	125060357	125063515	protein_coding	Chd4	exon	ENSMUSG00000063870	ProperStrand	303	2	-19.4120
chr10	74815169	74815220	protein_coding-noncoding	1110038D17Rik	utr3	ENSMUSG00000033416	NonProperStrand	5	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-11.1940
chr16	23110824	23110847	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr7	148634804	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-1.3326
chr15	84765530	84765547	protein_coding	Nup50	exon	ENSMUSG00000016619	ProperStrand	39	chrX	71589890	71589907	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	1	-11.0171
chr10	62629385	62629404	protein_coding	Mypn	intron	ENSMUSG00000020067	NonProperStrand	4	chr17	24665446	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-10.5499
chr2	26493475	26493518	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr9	121823892	121823908	protein_coding	Cyp8b1	exon	ENSMUSG00000050445	NonProperStrand	101	1	-5.1759
chr8	108233711	108233729	protein_coding	4933405L10Rik	exon	ENSMUSG00000013158	ProperStrand	94	chr3	68889123	68889258	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	4	-8.9069
chr11	101303966	101304049	protein_coding	Rpl27	utr5	ENSMUSG00000063316	ProperStrand	96	chrX	34622931	34622958	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-2.3500
chr5	21602104	21602126	protein_coding	Reln	intron	ENSMUSG00000042453	NonProperStrand	7	chr7	52382237	52382275	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-12.7031
chr13	21488442	21494572	protein_coding	Zkscan3	utr5	ENSMUSG00000021327	ProperStrand	9	chr11	69483136	69483192	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-6.0733
chr11	87919385	87919409	protein_coding	Cuedc1	intron	ENSMUSG00000018378	ProperStrand	7	chr16	23111374	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-5.0992
chr10	92678020	92678040	protein_coding	Cdk17	intron	ENSMUSG00000020015	NonProperStrand	2	chr12	110874223	110874291	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	1	-17.4298
chr3	27526054	27526099	protein_coding	Fndc3b	intron	ENSMUSG00000039286	ProperStrand	31	chr9	120037969	120038027	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-5.9972
chr8	13416897	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr8	24042900	24043000	protein_coding	Myst3	exon	ENSMUSG00000031540	ProperStrand	111	1	-5.2485
chr2	127416745	127416796	protein_coding	Mrps5	intron	ENSMUSG00000027374	ProperStrand	84	chr5	122854212	122854229	protein_coding	Arpc3	exon	ENSMUSG00000029465	NonProperStrand	33	1	-13.8479
chr4	140277859	140278636	protein_coding	Rcc2	utr3	ENSMUSG00000040945	ProperStrand	228	chr2	26494708	26494826	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	3	-3.2133
chr18	10052132	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr5	123679516	123679538	protein_coding	Psmd9	intron	ENSMUSG00000029440	ProperStrand	2	1	-16.2705
chr12	60115028	60117929	protein_coding	Sip1	exon	ENSMUSG00000060121	ProperStrand	5	chr18	35716754	35716834	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-6.9999
chr19	41842899	41842936	protein_coding	Arhgap19	utr3	ENSMUSG00000025154	ProperStrand	34	chr16	23111689	23111754	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.8630
chr17	78777351	78777367	protein_coding	Fez2	utr3	ENSMUSG00000056121	NonProperStrand	1	chr10	23505221	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-inf
chr12	31950405	31950423	protein_coding	Lamb1	exon	ENSMUSG00000002900	ProperStrand	87	chr7	31517736	31517774	protein_coding	Gapdhs	intron	ENSMUSG00000061099	NonProperStrand	1	1	-inf
chr3	14565743	14565762	protein_coding	Lrrcc1	exon	ENSMUSG00000027550	ProperStrand	39	chr5	108336363	108336463	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-9.3531
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr17	29967701	29967718	protein_coding	Mdga1	utr3	ENSMUSG00000043557	ProperStrand	9	1	-15.2521
chr4	131908356	131908475	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr7	52382753	52382779	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-1.2935
chr17	46663594	46663610	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr14	70843346	70843364	miRNA	Mir320	.	ENSMUSG00000065528	ProperStrand	6	1	-13.9852
chr3	139963262	139963280	LINE	Lx4A	L1	chr3Lx4A139963186	ProperStrand	1	chr4	137813143	137813162	protein_coding	Sh2d5	exon	ENSMUSG00000045349	NonProperStrand	31	1	-inf
chr11	97224232	97224290	protein_coding	Socs7	exon	ENSMUSG00000038485	ProperStrand	12	chr1	52076797	52076822	protein_coding	Stat4	intron	ENSMUSG00000062939	NonProperStrand	2	1	-inf
chr19	18400650	18400740	LINE	L1_Mus1	L1	chr19L1_Mus118400632	NonProperStrand	1	chr19	18400263	18400343	LTR	RLTR18B	ERVK	chr19RLTR18B18399998	ProperStrand	1	1	-inf
chr2	158204034	158204099	snoRNA	ENSMUSG00000065840_SNORA71	.	ENSMUSG00000065840	ProperStrand	107	chr8	73419662	73419762	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.1325
chr6	115757045	115757109	protein_coding	Rpl32	exon	ENSMUSG00000057841	ProperStrand	137	chr15	79913288	79913334	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	5	-10.3713
chr5	31443250	31443282	protein_coding	Mpv17	utr3	ENSMUSG00000090262	ProperStrand	13	chr7	29136525	29136598	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-8.6857
chr2	130101984	130102088	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	chr1	162967753	162967806	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	2	-4.4290
chr2	63936035	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr11	62418013	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	5	-5.7701
chr2	38280204	38280225	lincRNA	Gm13589	intron	ENSMUSG00000085950	NonProperStrand	31	chr5	144085983	144086573	protein_coding	Zdhhc4	exon	ENSMUSG00000001844	NonProperStrand	14	1	-17.6812
chr6	40267473	40267497	LINE	L1_Mur3	L1	chr6L1_Mur340266756	NonProperStrand	1	chr9	120038467	120038528	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-inf
chr9	71563169	71563259	protein_coding	Cgnl1	exon	ENSMUSG00000032232	ProperStrand	46	chr9	120039587	120039667	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.8097
chr10	59589007	59589586	protein_coding	Spock2	exon	ENSMUSG00000058297	NonProperStrand	2	chr18	35714145	35714262	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-10.7439
chr9	119664282	119664299	protein_coding	Scn11a	exon	ENSMUSG00000034115	ProperStrand	55	chr14	33005065	33005091	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-4.1578
chr18	33008798	33024482	protein_coding	Wdr36	exon	ENSMUSG00000038299	ProperStrand	28	chr16	23110852	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-7.0980
chr1	162127151	162129574	protein_coding	Mrps14	exon	ENSMUSG00000058267	ProperStrand	6	chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	1	-14.5848
chr11	5102008	5109982	protein_coding	Kremen1	exon	ENSMUSG00000020393	ProperStrand	33	chr4	131908236	131908295	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-4.2144
chr7	54078385	54078430	protein_coding	Gtf2h1	utr3	ENSMUSG00000006599	ProperStrand	9	chr4	131865381	131865424	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-7.7817
chr2	90235285	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	48760556	48760572	protein_coding	Orc4	utr3	ENSMUSG00000026761	ProperStrand	95	1	-3.5991
chr5	147646457	147646480	snoRNA	ENSMUSG00000077185_SNORD102	.	ENSMUSG00000077185	ProperStrand	142	chr5	108336438	108336490	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-3.2642
chr6	91415104	91415204	protein_coding	Chchd4	exon	ENSMUSG00000034203	ProperStrand	2	chr1	39605591	39605609	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-14.8180
chr19	45308496	45308513	protein_coding	Lbx1	exon	ENSMUSG00000025216	ProperStrand	23	chr10	110918559	110918587	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-5.2814
chr19	43579408	43579425	protein_coding	Got1	intron	ENSMUSG00000025190	NonProperStrand	147	chr11	6428088	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.6855
chr11	14961829	14961849	LINE	Lx	L1	chr11Lx14961726	ProperStrand	93	chr17	35089219	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-4.6370
chr5	75438992	75439082	protein_coding	Chic2	intron	ENSMUSG00000029229	ProperStrand	5	chr10	23505159	23505239	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-5.7809
chr15	79908961	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	chr17	26360447	26360537	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	1	-2.4382
chr12	74453948	74453966	protein_coding	Slc38a6	utr3	ENSMUSG00000044712	ProperStrand	4	chr11	55296276	55296308	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-11.8259
chr2	125157590	125157607	protein_coding	Fbn1	intron	ENSMUSG00000027204	NonProperStrand	32	chr16	23110959	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.9468
chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	chr15	82980193	82980220	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-3.8143
chr6	135820109	135820125	protein_coding-noncoding	Grin2b	utr3	ENSMUSG00000030209	NonProperStrand	7	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.7768
chr2	120360766	120360856	protein_coding	Zfp106	exon	ENSMUSG00000027288	ProperStrand	199	chr8	113416366	113416446	protein_coding	Fuk	intron	ENSMUSG00000033703	ProperStrand	18	1	-13.3505
chr13	19684241	19684258	protein_coding	Epdr1	utr3	ENSMUSG00000002808	ProperStrand	46	chr3	135777930	135777946	protein_coding	Bank1	intron	ENSMUSG00000037922	NonProperStrand	11	1	-17.3541
chr12	88225285	88225302	protein_coding	6430527G18Rik	utr5	ENSMUSG00000034168	ProperStrand	46	chr16	23111689	23111743	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.3385
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr10	86547287	86547304	protein_coding	1700113H08Rik	intron	ENSMUSG00000047129	NonProperStrand	4	1	-13.4632
chr13	95778767	95780281	protein_coding	Wdr41	exon	ENSMUSG00000042015	ProperStrand	8	chr14	76247765	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	5	-19.0483
chr11	23193857	23193883	protein_coding	Xpo1	exon	ENSMUSG00000020290	ProperStrand	123	chr12	112779192	112779282	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	7	-19.3883
chr3	100727317	100728874	protein_coding	Trim45	exon	ENSMUSG00000033233	ProperStrand	59	chr3	123210923	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.0937
chr4	147452527	147452548	protein_coding	Agtrap	utr3	ENSMUSG00000029007	ProperStrand	18	chr5	74489564	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-6.1191
chr2	26493361	26493391	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr19	4289357	4289701	protein_coding	Adrbk1	exon	ENSMUSG00000024858	ProperStrand	37	1	-7.1553
chr9	110100207	110105019	protein_coding	Smarcc1	exon	ENSMUSG00000032481	ProperStrand	108	chr11	97642952	97642981	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.5320
chr19	4918265	4918359	protein_coding	Dpp3	exon	ENSMUSG00000063904	ProperStrand	36	chr11	62416630	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-10.0330
chr16	18283302	18283319	protein_coding	Dgcr8	exon	ENSMUSG00000022718	ProperStrand	67	chr19	8798740	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-4.5890
chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	chrX	7314005	7314050	protein_coding	Ccdc120	exon	ENSMUSG00000031150	ProperStrand	9	1	-13.1626
chr19	57435752	57435769	protein_coding	Fam160b1	utr5	ENSMUSG00000033478	ProperStrand	49	chr15	34370581	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-3.9265
chr6	113419923	113419940	protein_coding	Il17re	exon	ENSMUSG00000043088	NonProperStrand	12	chr9	120039606	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-10.5507
chr2	144087332	144087375	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	chr3	153574574	153574616	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	2	-5.3010
chr11	57327760	57332122	protein_coding	Fam114a2	utr5	ENSMUSG00000020523	ProperStrand	25	chr3	108357255	108357355	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-6.2553
chr3	34588351	34588373	SINE	B3	B2	chr3B334588336	NonProperStrand	1	chr13	97884072	97884119	protein_coding	Fam169a	exon	ENSMUSG00000041817	ProperStrand	12	1	-inf
chr10	40069583	40069601	protein_coding	Cdk19	intron	ENSMUSG00000038481	ProperStrand	34	chr16	10374919	10374938	protein_coding	Tekt5	intron	ENSMUSG00000039179	ProperStrand	4	1	-18.8030
chr17	13184989	13185013	protein_coding	Wtap	utr5	ENSMUSG00000060475	ProperStrand	119	chr9	15119967	15120041	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-5.9002
chr2	165904622	165907066	protein_coding	Sulf2	exon	ENSMUSG00000006800	ProperStrand	171	chr11	69483136	69483279	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	5	-5.8166
chr5	138609118	138609152	protein_coding	Mcm7	exon	ENSMUSG00000029730	ProperStrand	258	chr5	136614841	136615335	protein_coding	Alkbh4	utr5	ENSMUSG00000039754	ProperStrand	40	1	-11.2071
chr7	37547991	37548008	protein_coding	Tshz3	intron	ENSMUSG00000021217	NonProperStrand	11	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-12.0541
chr2	69347269	69347398	protein_coding	Lrp2	exon	ENSMUSG00000027070	ProperStrand	35	chr5	130300534	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.4721
chr4	135607153	135607539	protein_coding	Rpl11	exon	ENSMUSG00000059291	ProperStrand	152	chr7	117166770	117166835	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-3.0810
chr11	84722945	84722961	protein_coding	Myo19	exon	ENSMUSG00000020527	ProperStrand	82	chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	1	-9.1307
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr5	116071701	116071718	protein_coding	Gcn1l1	exon	ENSMUSG00000041638	ProperStrand	408	1	-4.8198
chr1	137282909	137282991	protein_coding-noncoding	Ipo9	utr3	ENSMUSG00000041879	ProperStrand	1	chr18	35714156	35714246	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-inf
chr11	106857838	106857882	protein_coding	Kpna2	exon	ENSMUSG00000018362	ProperStrand	70	chr4	131908236	131908286	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-2.3280
chr2	112197678	112197926	protein_coding	Slc12a6	exon	ENSMUSG00000027130	ProperStrand	35	chr5	121655065	121655155	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-7.9211
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr7	80547651	80547667	protein_coding	Rgma	intron	ENSMUSG00000070509	ProperStrand	46	1	-13.6913
chr16	18240811	18240911	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	chr5	130300419	130300453	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	6	-2.3807
chr13	64465312	64465361	protein_coding	Ctsl	utr3	ENSMUSG00000021477	ProperStrand	44	chr8	91106344	91106360	protein_coding	Nkd1	intron	ENSMUSG00000031661	ProperStrand	57	1	-14.0416
chr7	26472435	26472451	protein_coding	Tgfb1	utr5	ENSMUSG00000002603	NonProperStrand	154	chr3	30497178	30497194	protein_coding	Arpm1	exon	ENSMUSG00000037737	ProperStrand	3	1	-17.7800
chr12	111929515	111931055	protein_coding	Hsp90aa1	utr3	ENSMUSG00000021270	ProperStrand	751	chr9	120038552	120038673	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	6	-1.8879
chr12	78063013	78063113	protein_coding	Max	utr5	ENSMUSG00000059436	ProperStrand	7	chr2	145076803	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-12.1401
chr5	140918296	140918363	protein_coding	Eif3b	exon	ENSMUSG00000056076	ProperStrand	66	chr16	23110902	23110998	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-1.2490
chr14	47948933	47948949	LTR	RMER17A2	ERVK	chr14RMER17A247948307	NonProperStrand	43	chr7	118219583	118219640	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-4.8084
chr13	97792553	97800169	protein_coding	1700029F12Rik	exon	ENSMUSG00000052075	ProperStrand	1	chr1	89681225	89681325	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-inf
chr19	6374771	6374811	protein_coding	Sf1	exon	ENSMUSG00000024949	ProperStrand	251	chr10	110918577	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-1.1275
chr3	113323028	113324052	protein_coding	Rnpc3	exon	ENSMUSG00000027981	ProperStrand	9	chr6	97112810	97112878	snoRNA	ENSMUSG00000065728_SNORA36	.	ENSMUSG00000065728	ProperStrand	158	1	-15.2477
chr13	96373722	96373800	protein_coding	F2r	exon	ENSMUSG00000048376	ProperStrand	9	chr10	110918611	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-7.1883
chr11	48613986	48614019	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	chr15	98350146	98350282	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	2	-3.0601
chr10	79737246	79737336	protein_coding	Dazap1	exon	ENSMUSG00000069565	ProperStrand	57	chr3	34549138	34549190	protein_coding	Sox2	utr5	ENSMUSG00000074637	ProperStrand	299	1	-10.1976
chr11	102266201	102266388	protein_coding	Slc25a39	exon	ENSMUSG00000018677	ProperStrand	35	chr4	131908236	131908277	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.2627
chr17	46367181	46367259	protein_coding	Xpo5	exon	ENSMUSG00000067150	ProperStrand	31	chr12	106269467	106269557	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-5.4160
chr17	33955113	33955129	protein_coding	Kank3	exon	ENSMUSG00000042099	ProperStrand	64	chr7	116663633	116663711	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.4017
chr8	86208673	86211021	protein_coding	Pkn1	exon	ENSMUSG00000057672	ProperStrand	36	chr19	8963027	8963084	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.1678
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr2	32563527	32563544	protein_coding	Cdk9	exon	ENSMUSG00000009555	NonProperStrand	49	1	-9.0121
chr1	196786599	196786615	lincRNA	Gm16897	intron	ENSMUSG00000086469	ProperStrand	12	chr9	120038466	120038492	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-10.0895
chr11	48616638	48616708	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	chrX	71517847	71517951	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	3	-7.1841
chr5	100855903	100855942	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr8	86187888	86188092	protein_coding	Gipc1	exon	ENSMUSG00000019433	ProperStrand	60	1	-6.6378
chr4	102677613	102677629	protein_coding	Tctex1d1	utr3	ENSMUSG00000028523	ProperStrand	5	chr17	35089181	35089231	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-10.6035
chr10	12642387	12642413	lincRNA	B230208H11Rik	exon	ENSMUSG00000085233	ProperStrand	21	chr2	71739502	71739572	protein_coding	Pdk1	utr3	ENSMUSG00000006494	ProperStrand	37	3	-19.4959
chr19	46022236	46022252	protein_coding	9130011E15Rik	intron	ENSMUSG00000039901	ProperStrand	129	chr16	90386835	90386853	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	1	-10.6717
chr3	52917297	52917318	protein_coding	Lhfp	intron	ENSMUSG00000048332	NonProperStrand	4	chr4	116827121	116827178	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	2	-19.8766
chrX	166423044	166423909	protein_coding	Mid1	exon	ENSMUSG00000035299	ProperStrand	209	chr4	122968584	122968655	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-3.8758
chr7	29532930	29533977	protein_coding	Sars2	exon	ENSMUSG00000070699	ProperStrand	6	chr9	120039596	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-7.9123
chr15	78920163	78920191	protein_coding	Eif3l	exon	ENSMUSG00000033047	ProperStrand	81	chr8	74446729	74446745	protein_coding	Zfp617	intron	ENSMUSG00000066880	NonProperStrand	208	1	-10.2168
chr2	26203131	26203147	protein_coding	Gpsm1	utr3	ENSMUSG00000026930	ProperStrand	93	chr2	120172356	120172374	protein_coding	Vps39	intron	ENSMUSG00000027291	ProperStrand	24	1	-14.2905
chr1	183848415	183860891	protein_coding	Enah	exon	ENSMUSG00000022995	ProperStrand	196	chr11	69483136	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-1.5338
chr6	145564547	145564563	protein_coding	Tuba3b	utr5	ENSMUSG00000067338	ProperStrand	152	chr11	69483252	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.0444
chr8	119418319	119418399	protein_coding-noncoding	2310061C15Rik	utr3	ENSMUSG00000014633	NonProperStrand	1	chr8	119418538	119418628	protein_coding	2310061C15Rik	intron	ENSMUSG00000014633	NonProperStrand	1	1	-inf
chr5	112865460	112865476	protein_coding	Sez6l	exon	ENSMUSG00000058153	ProperStrand	81	chr16	23110558	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.9653
chr6	91056966	91057056	protein_coding	Nup210	intron	ENSMUSG00000030091	ProperStrand	140	chr12	70685729	70685796	protein_coding	Sos2	utr3	ENSMUSG00000034801	ProperStrand	11	2	-19.2106
chr14	68318296	68331179	protein_coding	Cdca2	exon	ENSMUSG00000048922	ProperStrand	50	chr16	23111373	23111496	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-2.8538
chr10	80780196	80780216	protein_coding	Pip5k1c	intron	ENSMUSG00000034902	ProperStrand	26	chr16	23110828	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.2392
chr9	21202425	21202505	protein_coding	Ilf3	exon	ENSMUSG00000032178	ProperStrand	164	chr9	120038583	120038673	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.3985
chr7	147081173	147087002	protein_coding	Kndc1	exon	ENSMUSG00000066129	ProperStrand	15	chr1	187066796	187066863	snoRNA	ENSMUSG00000077571_Snora36b	.	ENSMUSG00000077571	ProperStrand	244	1	-13.3219
chr11	19395066	19395083	LTR	RLTR17	ERVK	chr11RLTR1719395000	NonProperStrand	1	chr16	11144103	11144203	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	1	-inf
chr4	62793512	62793602	protein_coding	Zfp618	exon	ENSMUSG00000028358	ProperStrand	8	chr7	150717344	150717424	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	2	-15.3661
chr2	38580722	38580762	protein_coding	Nr6a1	utr3	ENSMUSG00000063972	ProperStrand	52	chr4	131866206	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-6.6267
chr8	124909961	124909978	protein_coding	Zc3h18	intron	ENSMUSG00000017478	NonProperStrand	9	chr4	148494136	148494153	protein_coding	Dffa	utr3	ENSMUSG00000028974	ProperStrand	55	1	-17.3035
chr6	28376112	28376185	protein_coding	Arf5	utr3	ENSMUSG00000020440	ProperStrand	19	chr10	23505151	23505237	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-5.4097
chr2	90235299	90235348	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	29014963	29014981	protein_coding	4430402I18Rik	intron	ENSMUSG00000064202	NonProperStrand	3	1	-10.7414
chr17	34134325	34134393	protein_coding	H2-K1	exon	ENSMUSG00000061232	ProperStrand	4	chr9	15119659	15119759	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-8.0470
chr8	126521102	126521127	protein_coding	Taf5l	utr3	ENSMUSG00000038697	ProperStrand	23	chr16	23111448	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-7.3487
chr11	17109127	17109390	protein_coding	Pno1	exon	ENSMUSG00000020116	ProperStrand	5	chr13	49779668	49779748	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	2	-19.0034
chr7	24779190	24779213	SINE	ID_B1	B4	chr7ID_B124779183	NonProperStrand	54	chr10	42388803	42388829	protein_coding	Ostm1	intron	ENSMUSG00000038280	ProperStrand	14	1	-16.5633
chr5	24911308	24914988	protein_coding	Mll3	utr5	ENSMUSG00000038056	ProperStrand	31	chr1	145626114	145626195	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-10.1600
chr7	90774033	90774074	protein_coding	Tmc3	utr3	ENSMUSG00000038540	ProperStrand	10	chr5	121655017	121655107	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	7	-inf
chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	chr18	75161124	75161172	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	1	-4.5495
chr2	163926299	163926354	protein_coding	Stk4	intron	ENSMUSG00000018209	ProperStrand	20	chr11	97643008	97643049	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.4938
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr10	122702078	122702094	protein_coding	Fam19a2	utr5	ENSMUSG00000044071	NonProperStrand	52	1	-9.6570
chr19	23332023	23332040	protein_coding	Smc5	exon	ENSMUSG00000024943	ProperStrand	146	chrX	156571158	156576274	protein_coding	Pdha1	utr5	ENSMUSG00000031299	ProperStrand	27	1	-13.1439
chr9	72517883	72566141	protein_coding	Nedd4	exon	ENSMUSG00000032216	ProperStrand	308	chr1	162967491	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-1.7856
chr3	85448965	85456213	protein_coding	Pet112l	exon	ENSMUSG00000028085	ProperStrand	81	chr5	151755614	151755631	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-7.1420
chr7	133434742	133435394	protein_coding	Sbk1	exon	ENSMUSG00000042978	ProperStrand	24	chr2	32818901	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-7.2911
chr18	34928540	34928557	protein_coding	Fam53c	exon	ENSMUSG00000034300	ProperStrand	72	chr2	63936035	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-7.4973
chr5	116438221	116438438	protein_coding	Cit	exon	ENSMUSG00000029516	ProperStrand	45	chr15	34370616	34370673	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-4.0871
chr1	162966189	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	chr2	130101983	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	2	-1.3240
chr2	26493448	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr4	122968633	122968718	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	3	-1.6659
chr3	114518923	114518946	LTR	RMER17A	ERVK	chr3RMER17A114518905	ProperStrand	1	chr7	30074412	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-inf
chr4	99577397	99577413	protein_coding	Itgb3bp	intron	ENSMUSG00000028549	ProperStrand	55	chr2	121079385	121079402	protein_coding	Trp53bp1	exon	ENSMUSG00000043909	ProperStrand	45	1	-14.0647
chr3	107133749	107133832	protein_coding	Rbm15	exon	ENSMUSG00000048109	ProperStrand	82	chr7	52381722	52381739	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-6.9528
chr4	140070806	140070856	protein_coding	Arhgef10l	utr3	ENSMUSG00000040964	ProperStrand	15	chr5	135422141	135422157	protein_coding	Cldn4	exon	ENSMUSG00000047501	ProperStrand	12	1	-19.6590
chr15	82000428	82000496	protein_coding	Srebf2	exon	ENSMUSG00000022463	ProperStrand	592	chr2	24825186	24827046	protein_coding	Wdr85	exon	ENSMUSG00000026975	ProperStrand	323	1	-5.4051
chr1	157137454	157140247	protein_coding	Xpr1	exon	ENSMUSG00000026469	NonProperStrand	4	chr14	31827477	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-12.6031
chr11	54824513	54824529	protein_coding	Anxa6	exon	ENSMUSG00000018340	NonProperStrand	2	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-10.4671
chr6	148473965	148474045	DNA	Tigger5	MER2_type	chr6Tigger5148473980	NonProperStrand	1	chr6	148473801	148473891	LTR	ORR1D1	MaLR	chr6ORR1D1148473655	ProperStrand	1	1	-inf
chr5	141188394	141188494	protein_coding	Baat1	utr5	ENSMUSG00000000148	ProperStrand	14	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-8.6732
chr17	3518631	3518671	protein_coding	Tiam2	exon	ENSMUSG00000023800	NonProperStrand	7	chr8	59992777	59992824	protein_coding	Hmgb2	exon	ENSMUSG00000054717	ProperStrand	184	2	-inf
chr11	3426352	3426368	protein_coding	Smtn	exon	ENSMUSG00000020439	ProperStrand	222	chr11	62416574	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-4.7603
chr19	55998429	55998445	protein_coding	Tcf7l2	utr3	ENSMUSG00000024985	ProperStrand	103	chr12	85291988	85292010	protein_coding	2410016O06Rik	exon	ENSMUSG00000046791	ProperStrand	27	1	-13.8470
chr6	113481378	113481401	protein_coding	Tmem111	exon	ENSMUSG00000030286	ProperStrand	10	chr19	8798764	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-8.3986
chr7	150760454	150760515	protein_coding	Cars	exon	ENSMUSG00000010755	ProperStrand	62	chr2	26768050	26768119	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	1	-8.3279
chr1	174057458	174057474	protein_coding	Pex19	intron	ENSMUSG00000003464	NonProperStrand	5	chr18	35716763	35716822	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-6.9999
chr18	58265429	58265445	protein_coding	Fbn2	intron	ENSMUSG00000024598	NonProperStrand	12	chr9	120039544	120039621	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-6.4506
chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chrX	19683228	19683244	protein_coding	Slc9a7	exon	ENSMUSG00000037341	NonProperStrand	136	1	-4.8564
chr13	9833565	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr1	183853860	183853887	protein_coding	Enah	exon	ENSMUSG00000022995	ProperStrand	196	1	-2.7594
chr12	68768753	68768843	LINE	L1Md_F2	L1	chr12L1Md_F268768613	ProperStrand	13	chr6	114874015	114874105	protein_coding	Vgll4	intron	ENSMUSG00000030315	NonProperStrand	5	1	-21.0986
chr2	83642207	83642223	protein_coding	Itgav	exon	ENSMUSG00000027087	ProperStrand	59	chr9	109934617	109934647	protein_coding	Mtap4	exon	ENSMUSG00000032479	ProperStrand	188	1	-11.0560
chr10	62274843	62302312	protein_coding	Tet1	utr3	ENSMUSG00000047146	ProperStrand	286	chr7	116663636	116663768	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	5	-3.6219
chr4	131353936	131353969	protein_coding-noncoding	Ptpru	utr3	ENSMUSG00000028909	ProperStrand	1	chr12	88778626	88778667	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-inf
chr17	45705820	45705910	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr13	51743567	51743647	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-1.0127
chr4	153410349	153410365	protein_coding	Ccdc27	exon	ENSMUSG00000039492	ProperStrand	94	chr9	15118322	15118357	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-2.6636
chr4	140878218	140878318	protein_coding	Epha2	exon	ENSMUSG00000006445	ProperStrand	148	chr17	35087919	35087948	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-3.4900
chr1	71639660	71639693	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr19	8799358	8799403	snoRNA	ENSMUSG00000065280_SNORD28	.	ENSMUSG00000065280	ProperStrand	269	1	-4.8853
chr4	43505656	43505737	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr2	147011593	147011610	protein_coding	Nkx2-2	exon	ENSMUSG00000027434	ProperStrand	47	1	-3.5151
chr4	148327492	148327508	protein_coding	Casz1	utr3	ENSMUSG00000028977	NonProperStrand	23	chr5	121655097	121655153	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.5970
chr2	32818810	32818900	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	chr4	116828387	116828425	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-1.1735
chr6	70794803	70794819	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chr9	120038467	120038551	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-2.7886
chr4	139230961	139230979	Low_complexity	GA-rich	Low_complexity	chr4GA-rich139230920	ProperStrand	1	chr16	23111451	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-inf
chr1	159489629	159489645	protein_coding	Sec16b	exon	ENSMUSG00000026589	ProperStrand	6	chr2	179773505	179773524	protein_coding	Psma7	exon	ENSMUSG00000027566	NonProperStrand	4	1	-19.3129
chr4	43505802	43505902	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr1	180262363	180262385	protein_coding	Hnrnpu	exon	ENSMUSG00000039630	ProperStrand	286	2	-1.4917
chr13	49810239	49818126	protein_coding	Iars	exon	ENSMUSG00000037851	ProperStrand	95	chr7	116664819	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-3.2870
chr2	179939136	179939153	protein_coding	Lama5	intron	ENSMUSG00000015647	NonProperStrand	11	chr8	73419717	73419774	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-6.4238
chr12	16946848	16946922	snoRNA	ENSMUSG00000064620_SNORA32	.	ENSMUSG00000064620	ProperStrand	165	chr17	24856620	24856720	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	6	-19.2296
chr6	88050890	88053713	protein_coding	Rpn1	utr3	ENSMUSG00000030062	ProperStrand	58	chr10	23505165	23505284	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-2.4578
chr19	41970608	41970624	protein_coding	Rrp12	utr5	ENSMUSG00000035049	ProperStrand	106	chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	1	-9.4769
chr1	88495752	88497719	protein_coding	Cops7b	exon	ENSMUSG00000026240	ProperStrand	59	chr11	97642996	97643076	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-4.4128
chr6	38004609	38004709	protein_coding-noncoding	Atp6v0a4	utr3	ENSMUSG00000038600	ProperStrand	1	chr7	52381849	52382080	protein_coding	Rpl13a	exon	ENSMUSG00000074129	ProperStrand	269	1	-inf
chr11	101433276	101434206	protein_coding	Nbr1	exon	ENSMUSG00000017119	ProperStrand	91	chr7	16745664	16745713	protein_coding	Slc8a2	utr3	ENSMUSG00000030376	ProperStrand	7	1	-16.9623
chr19	45848829	45848905	protein_coding	Mgea5	intron	ENSMUSG00000025220	ProperStrand	53	chr5	121655099	121655125	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-6.6987
chr10	4999647	4999663	protein_coding	Syne1	exon	ENSMUSG00000019769	ProperStrand	49	chr11	97642961	97643063	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	4	-9.9457
chr2	120525667	120525686	protein_coding	Stard9	exon	ENSMUSG00000033705	ProperStrand	42	chr1	194571808	194571880	snRNA	ENSMUSG00000064881_U5	.	ENSMUSG00000064881	ProperStrand	187	3	-inf
chr18	35716695	35716761	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	chr5	125884616	125884654	tRNA	tRNA1317-AlaTGC	.	487641	ProperStrand	149	3	-2.8636
chr10	60519028	60519092	Low_complexity	GA-rich	Low_complexity	chr10GA-rich60519003	NonProperStrand	6	chr2	179928546	179928702	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	1	-14.4568
chr8	112386338	112386374	antisense	Gm17344	.	ENSMUSG00000078143	NonProperStrand	100	chrX	96142379	96142413	protein_coding	Yipf6	utr3	ENSMUSG00000047694	ProperStrand	10	1	-15.9368
chrX	103395948	103398996	protein_coding	Pgk1	intron	ENSMUSG00000062070	ProperStrand	484	chr11	6428060	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	7	-5.3014
chr2	172957822	172957841	antisense	1300015D01Rik	.	ENSMUSG00000087382	ProperStrand	34	chr9	120038553	120038608	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.0893
chr17	15631471	15631487	protein_coding	Psmb1	exon	ENSMUSG00000014769	NonProperStrand	2	chr16	23109029	23109055	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-14.7417
chr10	90324049	90324065	protein_coding	Anks1b	intron	ENSMUSG00000058589	NonProperStrand	230	chr11	106362556	106362630	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-4.7712
chr12	60476078	60476094	LTR	LTR16D	ERVL	chr12LTR16D60475969	NonProperStrand	17	chr5	136707644	136707662	protein_coding	Sh2b2	exon	ENSMUSG00000005057	NonProperStrand	101	1	-14.8355
chr2	156134043	156134101	protein_coding	Phf20	utr3	ENSMUSG00000038116	ProperStrand	60	chr5	74489564	74489654	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	7	-20.0164
chr1	189536649	189536674	protein_coding	Esrrg	intron	ENSMUSG00000026610	ProperStrand	24	chr16	23111422	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-4.7906
chr17	45803316	45803383	protein_coding	Tmem63b	exon	ENSMUSG00000036026	ProperStrand	93	chr11	69481341	69481431	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-2.4311
chr15	10504979	10504995	protein_coding	Rai14	exon	ENSMUSG00000022246	ProperStrand	180	chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-4.3218
chr17	39980020	39980100	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr4	117554142	117554232	protein_coding	B4galt2	utr5	ENSMUSG00000028541	ProperStrand	11	1	-10.6733
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr4	148864276	148864293	protein_coding	Lzic	intron	ENSMUSG00000028990	ProperStrand	9	1	-9.7556
chr6	86731276	86731292	protein_coding	Anxa4	intron	ENSMUSG00000029994	ProperStrand	47	chr1	162965530	162965598	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-6.3141
chr9	21560319	21560409	protein_coding	Spc24	utr3	ENSMUSG00000074476	ProperStrand	19	chr19	8800394	8800474	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-5.7475
chr8	32275239	32276544	protein_coding	Mak16	exon	ENSMUSG00000031578	ProperStrand	26	chr6	71832638	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-7.2726
chr14	52617508	52617820	protein_coding	Arhgef40	exon	ENSMUSG00000004562	NonProperStrand	8	chr2	121949511	121949527	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	1	-14.4338
chr7	149562136	149562173	protein_coding	Ctsd	utr3	ENSMUSG00000007891	ProperStrand	60	chr1	162966008	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-3.6033
chrX	140784981	140785071	protein_coding-noncoding	Alg13	utr3	ENSMUSG00000041718	ProperStrand	87	chr5	145966307	145966323	protein_coding	Zkscan5	exon	ENSMUSG00000055991	NonProperStrand	2	1	-20.1717
chr10	80046953	80047043	protein_coding	Fam108a	exon	ENSMUSG00000003346	ProperStrand	14	chr6	71832605	71832685	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	6	-inf
chr6	50515049	50515088	protein_coding	Cycs	utr3	ENSMUSG00000063694	ProperStrand	11	chr10	23505149	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.1476
chr1	165897259	165898299	protein_coding	BC055324	exon	ENSMUSG00000041406	ProperStrand	35	chr3	123210854	123210919	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-7.7019
chr12	85350481	85350499	protein_coding	Acot1	utr5	ENSMUSG00000072949	ProperStrand	72	chr17	24857723	24857830	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.9975
chr6	89269357	89269447	protein_coding	Plxna1	utr3	ENSMUSG00000030084	ProperStrand	233	chr9	54576045	54578442	protein_coding	Wdr61	exon	ENSMUSG00000061559	ProperStrand	14	4	-inf
chr4	53494386	53504300	protein_coding	Slc44a1	exon	ENSMUSG00000028412	ProperStrand	38	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	2	-15.0658
chr8	37198050	37198103	protein_coding	D8Ertd82e	intron	ENSMUSG00000050271	ProperStrand	5	chr1	89673687	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-8.2536
chr13	74186400	74186455	protein_coding	Cep72	exon	ENSMUSG00000021572	ProperStrand	10	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-13.9486
chr5	135409168	135409210	protein_coding	Wbscr27	intron	ENSMUSG00000040557	ProperStrand	2	chr3	123210922	123210978	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-9.1566
chr4	53873624	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	chr4	122970403	122970526	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	2	-5.6460
chr17	45706435	45706503	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr3	85942713	85942730	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	1	-3.2919
chr5	136387160	136387219	protein_coding	Ywhag	exon	ENSMUSG00000051391	ProperStrand	142	chr13	49779771	49779802	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-5.3200
chr4	131908689	131908789	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	chr2	32530695	32530769	snoRNA	ENSMUSG00000093277_AL772271.2	.	ENSMUSG00000093277	ProperStrand	23	4	-9.9317
chr12	17552942	17552994	protein_coding	Odc1	intron	ENSMUSG00000011179	ProperStrand	173	chr3	61169590	61169615	protein_coding	Rap2b	utr3	ENSMUSG00000036894	ProperStrand	12	1	-14.4811
chr2	93547416	93547516	protein_coding	Ext2	exon	ENSMUSG00000027198	ProperStrand	49	chr11	62418039	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	5	-inf
chr9	45238593	45255761	protein_coding	Dscaml1	exon	ENSMUSG00000032087	ProperStrand	23	chr19	8799836	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-6.8411
chr1	72895724	72895744	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	chr14	55476645	55476661	protein_coding	Homez	exon	ENSMUSG00000057156	NonProperStrand	127	1	-7.9846
chr11	23184603	23184703	protein_coding	Xpo1	exon	ENSMUSG00000020290	ProperStrand	123	chr16	23110470	23110530	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.3367
chr2	130853083	130853183	protein_coding	Atrn	utr3	ENSMUSG00000027312	ProperStrand	16	chr16	23110961	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.9771
chr5	74489202	74489254	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr1	37450200	37450290	protein_coding	Inpp4a	intron	ENSMUSG00000026113	ProperStrand	21	1	-7.7154
chrX	22878290	22878380	protein_coding	Klhl13	intron	ENSMUSG00000036782	NonProperStrand	3	chr6	39419111	39419191	protein_coding	Dennd2a	intron	ENSMUSG00000038456	ProperStrand	13	1	-inf
chr11	5803107	5803124	protein_coding	Gck	exon	ENSMUSG00000041798	NonProperStrand	4	chr16	23110840	23110889	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.6489
chr4	140271907	140272951	protein_coding	Rcc2	exon	ENSMUSG00000040945	ProperStrand	228	chr7	118219574	118219652	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	4	-7.0863
chr11	117713990	117714080	protein_coding	Birc5	exon	ENSMUSG00000017716	ProperStrand	16	chr14	76247762	76247842	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-6.7721
chr2	91121990	91122699	protein_coding	1110051M20Rik	exon	ENSMUSG00000040591	ProperStrand	4	chr11	97642952	97643001	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-7.8635
chr12	111891527	111891627	protein_coding	Dync1h1	intron	ENSMUSG00000018707	ProperStrand	648	chr19	8799858	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-0.9377
chr14	56300131	56300253	protein_coding	Tinf2	exon	ENSMUSG00000007589	ProperStrand	5	chr7	116664872	116664914	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-7.4478
chr3	89891686	89891738	protein_coding-noncoding	Tpm3	utr5	ENSMUSG00000027940	ProperStrand	40	chr1	162967515	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-7.0957
chr11	105919198	105919278	protein_coding	Dcaf7	utr3	ENSMUSG00000049354	ProperStrand	30	chr16	23110869	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0481
chr6	61060504	61060522	LTR	RMER12B	ERVK	chr6RMER12B61060296	NonProperStrand	8	chr2	152508434	152508500	protein_coding-noncoding	H13	utr5	ENSMUSG00000019188	ProperStrand	1	1	-inf
chr14	119064298	119064315	protein_coding	Abcc4	intron	ENSMUSG00000032849	ProperStrand	137	chr17	46381262	46381297	protein_coding	Polr1c	exon	ENSMUSG00000067148	ProperStrand	58	1	-11.7242
chr6	71818694	71818745	protein_coding	Immt	exon	ENSMUSG00000052337	ProperStrand	48	chrX	34622931	34623021	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-3.5794
chrX	98643444	98643465	protein_coding	Nono	utr3	ENSMUSG00000031311	ProperStrand	102	chr17	39985656	39985756	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	2	-8.0837
chr4	123188413	123188430	protein_coding	Macf1	exon	ENSMUSG00000028649	ProperStrand	320	chr9	61771987	61772487	protein_coding	Kif23	exon	ENSMUSG00000032254	ProperStrand	41	2	-16.9141
chr7	107645290	107645314	protein_coding	Ucp2	utr5	ENSMUSG00000033685	ProperStrand	54	chr7	116663634	116663737	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.6939
chr17	35152824	35152855	protein_coding	Vars	exon	ENSMUSG00000007029	ProperStrand	121	chr6	29515231	29515732	protein_coding	Tnpo3	exon	ENSMUSG00000012535	ProperStrand	58	1	-11.9733
chr6	92192796	92192907	protein_coding	Trh	exon	ENSMUSG00000005892	ProperStrand	87	chr10	6063958	6063977	protein_coding	Akap12	intron	ENSMUSG00000038587	ProperStrand	1008	1	-6.9365
chr8	89368750	89368819	protein_coding	N4bp1	exon	ENSMUSG00000031652	ProperStrand	98	chr4	155366536	155366553	protein_coding	B3galt6	exon	ENSMUSG00000050796	ProperStrand	40	3	-20.5570
chr11	22901380	22901427	protein_coding	Cct4	exon	ENSMUSG00000007739	ProperStrand	81	chr7	16524110	16524219	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	1	-9.1163
chr9	114423125	114472610	protein_coding	Trim71	utr5	ENSMUSG00000079259	ProperStrand	162	chr7	148634708	148634788	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-3.9531
chr4	141077878	141077933	protein_coding-noncoding	Spen	utr3	ENSMUSG00000040761	ProperStrand	1	chr11	83107808	83107898	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	1	-inf
chr9	74919387	74964013	protein_coding	Myo5a	utr5	ENSMUSG00000034593	ProperStrand	89	chr11	97642952	97643009	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.8258
chr12	110837865	110837882	protein_coding	Rtl1	intron	ENSMUSG00000085925	ProperStrand	5	chr11	77995236	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-11.3184
chr7	4656761	4656804	protein_coding	Brsk1	exon	ENSMUSG00000035390	ProperStrand	12	chr16	23111427	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.0123
chr19	4618151	4618213	protein_coding	Pcx	exon	ENSMUSG00000024892	ProperStrand	70	chr10	23505190	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-4.7717
chr9	107755403	107755444	protein_coding	Rbm6	utr5	ENSMUSG00000032582	ProperStrand	9	chr16	23110967	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.9939
chr5	28068262	28068279	protein_coding	Paxip1	utr3	ENSMUSG00000002221	ProperStrand	34	chr4	143027927	143028559	protein_coding	Oog4	exon	ENSMUSG00000047799	NonProperStrand	99	1	-13.4531
chr4	131908357	131908463	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr8	129786893	129786911	protein_coding	Pard3	intron	ENSMUSG00000025812	ProperStrand	44	1	-7.8791
chr17	35997991	35998010	antisense	5530401N12Rik	.	ENSMUSG00000087443	ProperStrand	8	chr13	51743567	51743626	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-10.9793
chr9	15120002	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	chr12	88778631	88778753	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	3	-3.4627
chr3	153575089	153575165	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	chr9	15118245	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	7	-4.3432
chr1	187193505	187194785	protein_coding	Eprs	exon	ENSMUSG00000026615	NonProperStrand	3	chr1	162965538	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	NonProperStrand	10	1	-inf
chr10	20043115	20043203	protein_coding	Bclaf1	exon	ENSMUSG00000037608	ProperStrand	83	chr1	162966010	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	7	-18.7907
chr10	60293859	60293981	protein_coding	Unc5b	utr5	ENSMUSG00000020099	ProperStrand	25	chr11	77500519	77500539	protein_coding	Nufip2	intron	ENSMUSG00000037857	NonProperStrand	4	1	-19.5900
chr3	153575090	153575117	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	chr5	115940281	115940406	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	1	-4.0250
chr2	26493418	26493508	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr18	42480438	42480459	protein_coding	Rbm27	exon	ENSMUSG00000024491	ProperStrand	38	1	-7.1020
chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	chr11	106362639	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	2	-4.4165
chr7	117189971	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	chr16	38158134	38158218	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	10	-8.0616
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	84843569	84843586	protein_coding	Usp32	intron	ENSMUSG00000000804	ProperStrand	45	1	-5.0171
chr4	115680845	115690074	protein_coding	Faah	exon	ENSMUSG00000034171	ProperStrand	26	chr11	69481387	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	4	-15.1933
chr1	53813500	53813525	protein_coding	Stk17b	utr3	ENSMUSG00000026094	ProperStrand	6	chr7	116663634	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-7.0045
chr11	114533094	114533134	protein_coding	Rpl38	exon	ENSMUSG00000057322	ProperStrand	29	chr18	75161534	75161579	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	2	-13.7937
chr2	26203131	26203147	protein_coding	Gpsm1	utr3	ENSMUSG00000026930	ProperStrand	93	chr9	64022855	64022923	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-7.1524
chr11	74475444	74475534	protein_coding	1300001I01Rik	exon	ENSMUSG00000020741	ProperStrand	76	chr4	131865854	131865936	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-2.6753
chr8	73051744	73051761	protein_coding	Fkbp8	utr5	ENSMUSG00000019428	ProperStrand	52	chr18	35714206	35714254	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-3.7074
chr3	52388277	52388294	SINE	B4A	B4	chr3B4A52388218	ProperStrand	169	chr2	125500353	125500401	protein_coding	Eid1	utr3	ENSMUSG00000091337	ProperStrand	60	1	-11.2358
chr19	39086259	39086276	protein_coding	Cyp2c55	exon	ENSMUSG00000025002	ProperStrand	18	chr5	130295414	130295477	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-7.6470
chr2	90235296	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	150823637	150823653	protein_coding	Rxfp2	intron	ENSMUSG00000053368	NonProperStrand	7	1	-8.8025
chr7	25755022	25755189	protein_coding	Rabac1	exon	ENSMUSG00000003380	ProperStrand	19	chr4	131865864	131865954	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.7782
chr14	9048569	9048587	protein_coding	Kctd6	utr5	ENSMUSG00000021752	NonProperStrand	6	chr17	35299507	35299599	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	5	-19.6968
chr19	29217977	29217993	protein_coding	Rcl1	utr3	ENSMUSG00000024785	NonProperStrand	4	chr9	120038550	120038585	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-8.5118
chr4	134893863	134893953	protein_coding	Srrm1	exon	ENSMUSG00000028809	ProperStrand	142	chr17	24856672	24856752	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	4	-14.8636
chr13	113869363	113869380	protein_coding	Cdc20b	intron	ENSMUSG00000078926	NonProperStrand	16	chr4	131908308	131908339	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.6705
chr7	52713639	52713934	protein_coding	Ftl1	exon	ENSMUSG00000050708	ProperStrand	807	chr19	8798484	8798505	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-0.8410
chr11	33459546	33459571	protein_coding	Gabrp	intron	ENSMUSG00000020159	NonProperStrand	11	chr19	8963027	8963080	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.4574
chr4	21612893	21612910	protein_coding	Prdm13	exon	ENSMUSG00000040478	ProperStrand	51	chr1	33828651	33828669	protein_coding	Zfp451	intron	ENSMUSG00000042197	NonProperStrand	393	1	-9.8757
chr15	36815588	36815605	SINE	ID_B1	B4	chr15ID_B136815550	NonProperStrand	4	chr11	114558117	114563111	protein_coding	Ttyh2	exon	ENSMUSG00000034714	ProperStrand	23	1	-18.9843
chr17	5336612	5336647	protein_coding	Arid1b	exon	ENSMUSG00000069729	ProperStrand	28	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.6458
chr6	56711367	56711468	protein_coding	Avl9	utr3	ENSMUSG00000029787	ProperStrand	21	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	5	-14.2330
chr3	66100724	66100740	protein_coding	Veph1	utr5	ENSMUSG00000027831	NonProperStrand	92	chr9	44551084	44551207	protein_coding	Arcn1	utr3	ENSMUSG00000032096	ProperStrand	35	2	-21.1976
chr2	166890256	166890311	protein_coding	1500012F01Rik	intron	ENSMUSG00000074578	ProperStrand	14	chr8	32260341	32260431	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-7.5228
chr15	102350967	102350983	protein_coding	Tarbp2	utr5	ENSMUSG00000023051	ProperStrand	2	chr7	35023072	35023172	protein_coding	4931406P16Rik	utr3	ENSMUSG00000066571	ProperStrand	75	1	-inf
chr13	9833562	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr12	88223804	88223846	protein_coding	6430527G18Rik	exon	ENSMUSG00000034168	ProperStrand	46	1	-5.4718
chr5	21326218	21326855	protein_coding	Slc26a5	exon	ENSMUSG00000029015	NonProperStrand	1	chr15	88642370	88642470	protein_coding	Alg12	intron	ENSMUSG00000035845	ProperStrand	5	1	-inf
chr7	118218738	118218899	protein_coding	Eif4g2	exon	ENSMUSG00000005610	ProperStrand	134	chr2	26494712	26494802	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.7545
chr7	106627900	106627935	protein_coding	Rps3	exon	ENSMUSG00000030744	ProperStrand	159	chr1	162965540	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-4.6850
chr5	143874599	143874615	protein_coding	Rnf216	utr5	ENSMUSG00000045078	NonProperStrand	29	chr11	62416596	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-6.6005
chr6	35177672	35177688	protein_coding	Nup205	exon	ENSMUSG00000038759	ProperStrand	56	chr7	117166720	117166768	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-4.9493
chr2	6315599	6329990	protein_coding	Usp6nl	exon	ENSMUSG00000039046	ProperStrand	59	chrX	34622928	34623018	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-3.2015
chr8	127363817	127364378	protein_coding	2810004N23Rik	exon	ENSMUSG00000031984	ProperStrand	22	chr15	79913288	79913334	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	5	-20.4332
chr13	81962988	81963009	SINE	B1F2	Alu	chr13B1F281962960	ProperStrand	15	chr11	106646474	106646528	protein_coding	Ddx5	exon	ENSMUSG00000020719	ProperStrand	181	1	-13.9225
chr1	136213730	136214022	protein_coding	Ppfia4	exon	ENSMUSG00000026458	ProperStrand	45	chr9	30235085	30235102	protein_coding	Snx19	exon	ENSMUSG00000031993	ProperStrand	353	1	-10.3423
chr19	5677255	5677456	protein_coding	Pcnxl3	exon	ENSMUSG00000054874	ProperStrand	96	chr1	162967515	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-2.6346
chr6	115979552	115979632	protein_coding	Tmcc1	intron	ENSMUSG00000030126	NonProperStrand	6	chr6	115982357	115982447	protein_coding	Tmcc1	intron	ENSMUSG00000030126	ProperStrand	5	1	-19.0115
chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	chrX	133268326	133268364	protein_coding	Morf4l2	exon	ENSMUSG00000031422	ProperStrand	113	1	-8.0041
chr2	84680672	84680714	protein_coding	Slc43a1	intron	ENSMUSG00000027075	ProperStrand	5	chr5	130295414	130295450	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-10.3593
chr14	21581394	21581494	protein_coding	Camk2g	intron	ENSMUSG00000021820	ProperStrand	24	chr18	35716817	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.8034
chr18	43215056	43215073	protein_coding	Ppp2r2b	intron	ENSMUSG00000024500	NonProperStrand	95	chr2	178194847	178194864	protein_coding	Cdh26	exon	ENSMUSG00000039155	NonProperStrand	77	1	-11.8890
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr5	123622050	123622066	protein_coding	Hpd	exon	ENSMUSG00000029445	ProperStrand	254	1	-10.2594
chr7	114829728	114886579	protein_coding	Ppfibp2	intron	ENSMUSG00000036528	NonProperStrand	564	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	3	-10.7678
chr17	71194282	71194326	protein_coding	Tgif1	exon	ENSMUSG00000047407	ProperStrand	64	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-3.4733
chr15	72824922	72825002	protein_coding	Trappc9	intron	ENSMUSG00000047921	NonProperStrand	53	chr3	40506715	40506805	protein_coding	Intu	utr3	ENSMUSG00000060798	NonProperStrand	17	1	-16.1123
chr15	10924744	10924760	protein_coding	Amacr	exon	ENSMUSG00000022244	ProperStrand	9	chr7	29136525	29136580	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.9747
chr12	40943785	40943814	protein_coding	Ifrd1	exon	ENSMUSG00000001627	ProperStrand	37	chr19	8800364	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-4.4406
chr13	23647030	23647653	protein_coding	Hist1h1d	exon	ENSMUSG00000052565	ProperStrand	78	chr4	131908689	131908870	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-2.9447
chr14	48287103	48289826	protein_coding	Ktn1	exon	ENSMUSG00000021843	ProperStrand	64	chr2	26768387	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-5.4754
chr10	79756435	79756535	protein_coding	Rps15	exon	ENSMUSG00000063457	ProperStrand	119	chr10	30530998	30531020	tRNA	tRNA81-GluCTC	.	1547857	ProperStrand	154	1	-10.0469
chr17	57147140	57147156	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	ProperStrand	29	chr19	5286321	5286389	protein_coding	Sf3b2	exon	ENSMUSG00000024853	ProperStrand	102	1	-13.7198
chr1	153602594	153602610	protein_coding	Edem3	utr5	ENSMUSG00000043019	ProperStrand	84	chr1	162965979	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-5.1706
chrX	72214248	72214264	protein_coding-noncoding	Gab3	utr3	ENSMUSG00000032750	ProperStrand	420	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-4.7643
chr7	134671387	134671505	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	chr3	88497853	88497979	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	2	-4.1085
chr5	124803778	124803896	protein_coding	Cdk2ap1	intron	ENSMUSG00000029394	ProperStrand	22	chr1	172993122	172993139	protein_coding	Fcgr3	intron	ENSMUSG00000059498	ProperStrand	44	1	-15.9989
chr8	3613398	3613455	protein_coding	Xab2	exon	ENSMUSG00000019470	ProperStrand	52	chr7	116664794	116664884	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.7980
chr19	27291761	27291777	protein_coding	Vldlr	utr5	ENSMUSG00000024924	NonProperStrand	36	chr19	8963028	8963083	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.1678
chr1	134374614	134374704	protein_coding	Rbbp5	intron	ENSMUSG00000026439	ProperStrand	22	chr11	101150356	101150375	protein_coding	Becn1	intron	ENSMUSG00000035086	ProperStrand	8	1	-18.6015
chr10	42941801	42941817	protein_coding	Pdss2	exon	ENSMUSG00000038240	NonProperStrand	12	chr11	62416606	62416660	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-8.3961
chr3	58352447	58352464	protein_coding	Eif2a	exon	ENSMUSG00000027810	NonProperStrand	5	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-10.3095
chr10	79321923	79322102	protein_coding	Ptbp1	exon	ENSMUSG00000006498	ProperStrand	129	chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	1	-8.3001
chrX	91435868	91435958	protein_coding	Eif2s3x	utr3	ENSMUSG00000035150	ProperStrand	55	chr16	23111394	23111474	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-2.6254
chr1	63223721	63223789	protein_coding	Eef1b2	utr5	ENSMUSG00000025967	ProperStrand	106	chr2	150735319	150735339	protein_coding	Gins1	utr5	ENSMUSG00000027454	ProperStrand	51	1	-12.4980
chr7	52381973	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	chr15	79908939	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	3	-1.3252
chr5	31438548	31438564	antisense	Gm15469	.	ENSMUSG00000085493	ProperStrand	17	chr12	17553062	17553092	protein_coding	Odc1	intron	ENSMUSG00000011179	ProperStrand	173	1	-13.7551
chr1	134465558	134465574	protein_coding	Nfasc	utr3	ENSMUSG00000026442	NonProperStrand	48	chr13	38437929	38437946	protein_coding	Bmp6	utr5	ENSMUSG00000039004	ProperStrand	21	1	-15.8683
chr13	74460613	74461311	protein_coding	Sdha	exon	ENSMUSG00000021577	ProperStrand	70	chr1	192712615	192712631	protein_coding	Rps6kc1	exon	ENSMUSG00000089872	ProperStrand	241	1	-10.2157
chr3	82707847	82707863	antisense	4930564K09Rik	.	ENSMUSG00000086273	ProperStrand	48	chr9	120039533	120039621	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.7302
chr17	46779084	46779126	protein_coding	Klc4	exon	ENSMUSG00000003546	ProperStrand	5	chr12	110892838	110892905	snoRNA	ENSMUSG00000064621_AF357355	.	ENSMUSG00000064621	ProperStrand	60	1	-18.3592
chr4	129897222	129897238	protein_coding	Gm853	intron	ENSMUSG00000023120	NonProperStrand	1	chr4	140277549	140277649	protein_coding	Rcc2	utr3	ENSMUSG00000040945	ProperStrand	228	1	-inf
chr11	96681217	96681307	protein_coding	Nfe2l1	exon	ENSMUSG00000038615	ProperStrand	118	chr14	57420512	57420594	protein_coding	Zmym5	intron	ENSMUSG00000040123	ProperStrand	5	1	-17.0207
chr9	23182891	23182908	protein_coding	Bmper	intron	ENSMUSG00000031963	NonProperStrand	10	chr2	145077957	145209255	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-11.3789
chr1	20552541	20552558	protein_coding	Pkhd1	exon	ENSMUSG00000043760	NonProperStrand	49	chr19	8963032	8963048	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-10.5634
chr7	128061365	128066443	protein_coding	Polr3e	utr5	ENSMUSG00000030880	ProperStrand	43	chr4	131865904	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.3073
chr18	23198511	23198527	protein_coding	Nol4	utr5	ENSMUSG00000041923	NonProperStrand	2	chr13	34220219	34220360	protein_coding	Tubb2b	exon	ENSMUSG00000045136	ProperStrand	49	1	-inf
chr1	95303134	95303175	protein_coding	Hdlbp	utr3	ENSMUSG00000034088	ProperStrand	97	chr5	130300420	130300510	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-3.1781
chr10	39978339	39978427	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	chr4	132394297	132394327	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	6	-11.0441
chr17	24869755	24869771	protein_coding	Rpl3l	utr5	ENSMUSG00000002500	NonProperStrand	56	chr16	23111448	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.3551
chr2	90235313	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr13	91076039	91076057	protein_coding	Atg10	intron	ENSMUSG00000021619	NonProperStrand	5	1	-9.5409
chr11	107517558	107522420	protein_coding	Helz	exon	ENSMUSG00000020721	ProperStrand	60	chr3	95980342	95980410	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-6.8575
chr4	128886982	128887739	protein_coding	Yars	exon	ENSMUSG00000028811	ProperStrand	131	chr17	35087895	35087964	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-3.7146
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	120355753	120355839	snRNA	ENSMUSG00000080542_U4atac	.	ENSMUSG00000080542	ProperStrand	73	1	-4.0904
chr9	119157608	119157627	protein_coding	Oxsr1	intron	ENSMUSG00000036737	NonProperStrand	1	chrX	84483715	84483749	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-inf
chr18	84728634	84728650	protein_coding	Zfp407	exon	ENSMUSG00000048410	NonProperStrand	16	chr11	69481331	69481432	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-9.4384
chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	chr4	129843085	129843177	protein_coding	Tinagl1	utr3	ENSMUSG00000028776	ProperStrand	1	1	-inf
chr17	35286921	35287023	protein_coding	Prrc2a	exon	ENSMUSG00000024393	ProperStrand	315	chr15	78912351	78914552	protein_coding	Eif3l	exon	ENSMUSG00000033047	ProperStrand	81	1	-9.3881
chr11	60521115	60522046	protein_coding	Llgl1	exon	ENSMUSG00000020536	ProperStrand	20	chr8	13876178	13876228	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-9.3574
chr1	137281002	137281023	protein_coding	Ipo9	utr3	ENSMUSG00000041879	ProperStrand	53	chr17	24857764	24857842	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.5071
chr17	23955820	23955836	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	chr5	114577654	114577671	protein_coding	Alkbh2	exon	ENSMUSG00000044339	ProperStrand	5	1	-16.6169
chr3	98020988	98021078	LINE	Lx5	L1	chr3Lx598020708	NonProperStrand	1	chr4	115182965	115183045	LINE	Lx5	L1	chr4Lx5115182887	NonProperStrand	1	1	-inf
chr8	77651238	77651328	protein_coding	Mcm5	utr3	ENSMUSG00000005410	ProperStrand	199	chr5	147277481	147277561	protein_coding	Wasf3	intron	ENSMUSG00000029636	ProperStrand	32	1	-12.1776
chr4	131908819	131908899	lincRNA	Gm17300	exon	ENSMUSG00000091021	ProperStrand	109	chr14	31826433	31826627	protein_coding	Gnl3	exon	ENSMUSG00000042354	NonProperStrand	59	1	-12.1477
chr12	57368398	57368417	DNA	MER5A	MER1_type	chr12MER5A57368332	NonProperStrand	5	chr2	109516160	109516176	protein_coding	Bdnf	utr5	ENSMUSG00000048482	NonProperStrand	47	1	-19.2340
chr6	124998433	124998533	protein_coding	Ing4	utr3	ENSMUSG00000030330	ProperStrand	1	chr7	116663719	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-inf
chr4	34607875	34607965	LTR	RMER13A	ERVK	chr4RMER13A34607838	NonProperStrand	1	chr4	34607653	34607743	Other	RMER1A	Other	chr4RMER1A34607585	ProperStrand	1	1	-inf
chr10	96081312	96081369	protein_coding	Btg1	utr3	ENSMUSG00000036478	ProperStrand	21	chr16	23110911	23110964	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.9373
chr9	26440743	26440759	DNA	MER5A	MER1_type	chr9MER5A26440741	ProperStrand	108	chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	2	-5.7410
chr2	79132657	79132674	protein_coding-noncoding	Itga4	utr5	ENSMUSG00000027009	NonProperStrand	118	chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	1	-7.9179
chr17	87316802	87316818	protein_coding	1700090G07Rik	utr5	ENSMUSG00000037689	ProperStrand	7	chr4	131908753	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.0493
chr15	25730974	25731024	protein_coding	Myo10	exon	ENSMUSG00000022272	ProperStrand	168	chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	1	-7.4336
chr8	74126157	74126279	protein_coding	Fam129c	exon	ENSMUSG00000043243	NonProperStrand	6	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-16.0788
chr8	46855240	46855906	protein_coding	Sorbs2	exon	ENSMUSG00000031626	ProperStrand	50	chr9	83678800	83681879	protein_coding	Elovl4	exon	ENSMUSG00000032262	ProperStrand	159	1	-11.7251
chr3	142351260	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr17	39985578	39985665	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	3	-3.4169
chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	chr3	82198410	82198426	protein_coding	Mtap9	utr3	ENSMUSG00000033900	ProperStrand	5	1	-14.9186
chr8	113783023	113783096	protein_coding	Glg1	exon	ENSMUSG00000003316	ProperStrand	83	chr5	108334254	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-4.2000
chr8	88027203	88029510	protein_coding	Gpt2	exon	ENSMUSG00000031700	ProperStrand	32	chr13	90238691	90238723	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	3	-19.7655
chr9	20970668	20995778	protein_coding	Pde4a	exon	ENSMUSG00000032177	ProperStrand	11	chr11	62416951	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-9.4760
chr7	51505508	51505592	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-1.2544
chr7	31895791	31899711	protein_coding	Hpn	utr5	ENSMUSG00000001249	ProperStrand	126	chr16	19883897	19884019	protein_coding	A930003A15Rik	exon	ENSMUSG00000075330	ProperStrand	93	1	-10.9428
chr18	63908609	63908625	protein_coding	Wdr7	intron	ENSMUSG00000040560	NonProperStrand	180	chrX	84483702	84483751	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-6.0713
chr2	158182156	158182256	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	chr19	8798740	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	12	-2.1575
chr15	75668003	75668041	protein_coding	Zc3h3	exon	ENSMUSG00000075600	ProperStrand	14	chr2	26493376	26493474	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-6.5906
chr13	107911801	107911833	SINE	B4A	B4	chr13B4A107911649	NonProperStrand	8	chr4	131908808	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-11.8763
chr5	74489216	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr9	26865605	26865646	protein_coding	Ncapd3	exon	ENSMUSG00000035024	ProperStrand	16	3	-18.6840
chr2	121261685	121262141	protein_coding	Pdia3	exon	ENSMUSG00000027248	ProperStrand	74	chr19	6932228	6932244	protein_coding	Ccdc88b	exon	ENSMUSG00000047810	ProperStrand	13	1	-16.0383
chr12	29431895	29431930	protein_coding	Ttc15	exon	ENSMUSG00000020628	ProperStrand	15	chr7	29136541	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.9384
chr4	43505709	43505820	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr11	69559176	69571958	protein_coding	Polr2a	utr5	ENSMUSG00000005198	ProperStrand	200	2	-2.2285
chr2	144084763	144084806	protein_coding	Snx5	intron	ENSMUSG00000027423	ProperStrand	64	chr12	55797794	55797885	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	6	-21.5263
chr18	89387605	89387621	protein_coding	Cd226	intron	ENSMUSG00000034028	ProperStrand	47	chr8	32260358	32260428	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-5.1019
chr2	179913112	179913284	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr9	120037900	120037990	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-1.5412
chr17	23955821	23955839	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	chr1	162966823	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-4.4793
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr16	23110847	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	18	-4.5985
chr12	111891525	111904581	protein_coding	Dync1h1	intron	ENSMUSG00000018707	ProperStrand	648	chr10	110918549	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	5	-2.4830
chr11	102261035	102261071	protein_coding	Rundc3a	exon	ENSMUSG00000006575	ProperStrand	13	chr12	60141417	60141509	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	3	-inf
chr3	88342049	88342066	protein_coding	Mex3a	utr3	ENSMUSG00000074480	ProperStrand	7	chr7	116663694	116663769	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-15.8647
chr19	42405846	42405863	protein_coding	Crtac1	intron	ENSMUSG00000042401	NonProperStrand	17	chr4	131865859	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.9909
chr7	49745511	49745585	protein_coding	Zfp141	utr5	ENSMUSG00000092416	ProperStrand	17	chr16	23111376	23111466	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-5.7900
chr4	130305550	130305621	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	chr17	24857738	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	9	-7.0582
chr6	136536153	136536169	protein_coding	Atf7ip	exon	ENSMUSG00000030213	ProperStrand	22	chr7	51505224	51505308	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	1	-10.1774
chr2	37233443	37233905	protein_coding	Rc3h2	exon	ENSMUSG00000075376	ProperStrand	35	chr5	108334198	108334278	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	2	-9.5867
chr10	80642392	80642445	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr14	64829132	64829149	protein_coding	Msra	intron	ENSMUSG00000054733	NonProperStrand	84	1	-5.4395
chr1	139052289	139052389	LINE	L1Md_A	L1	chr1L1Md_A139046222	ProperStrand	1	chr15	34370545	34370583	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-inf
chr2	90235312	90235341	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	100819492	100819596	protein_coding	Ptrf	utr3	ENSMUSG00000004044	ProperStrand	14	1	-7.3487
chr16	28160269	28160285	protein_coding	Fgf12	utr3	ENSMUSG00000022523	NonProperStrand	3	chr13	46862888	46862959	snoRNA	ENSMUSG00000064558_SNORA55	.	ENSMUSG00000064558	ProperStrand	187	1	-17.6127
chr11	94491323	94491388	protein_coding	Lrrc59	exon	ENSMUSG00000020869	ProperStrand	115	chr9	63042015	63042031	protein_coding	Map2k5	exon	ENSMUSG00000058444	ProperStrand	193	1	-9.6641
chr18	82662186	82662202	protein_coding	Mbp	intron	ENSMUSG00000041607	NonProperStrand	185	chr11	106362639	106362672	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-5.1901
chr4	102289001	102289020	LINE	Lx2B	L1	chr4Lx2B102288806	ProperStrand	1	chr2	166720485	166720532	protein_coding	Arfgef2	utr3	ENSMUSG00000074582	ProperStrand	32	1	-inf
chr2	153510121	153512013	protein_coding	Dnmt3b	exon	ENSMUSG00000027478	ProperStrand	19	chr1	162967518	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-5.6883
chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	chr19	46022236	46022252	protein_coding	9130011E15Rik	intron	ENSMUSG00000039901	ProperStrand	129	1	-9.0843
chr1	134520739	134520757	protein_coding	Nfasc	intron	ENSMUSG00000026442	NonProperStrand	48	chr12	88778722	88778771	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-6.9408
chr12	52472722	52473417	protein_coding	G2e3	exon	ENSMUSG00000035293	ProperStrand	53	chr9	15119647	15119713	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.8468
chr17	75938033	75938049	protein_coding	Fam98a	exon	ENSMUSG00000002017	ProperStrand	22	chr17	56755384	56755400	protein_coding	Lonp1	exon	ENSMUSG00000041168	NonProperStrand	10	1	-18.9586
chr8	26933176	26933276	protein_coding	Ash2l	exon	ENSMUSG00000031575	ProperStrand	113	chr7	67123728	67123757	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	12	-inf
chr11	80965641	80965658	protein_coding	Accn1	exon	ENSMUSG00000020704	NonProperStrand	228	chr7	29136525	29136575	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-2.0098
chr15	10542794	10542835	protein_coding	Rai14	intron	ENSMUSG00000022246	ProperStrand	180	chrX	93136011	93136027	protein_coding	Las1l	exon	ENSMUSG00000057421	ProperStrand	248	1	-8.2698
chr17	34089460	34092024	protein_coding	Rps18	exon	ENSMUSG00000008668	ProperStrand	111	chr7	133939316	133939506	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	6	-20.2127
chr11	50111669	50112649	protein_coding	Canx	exon	ENSMUSG00000020368	ProperStrand	296	chr15	102301221	102303768	protein_coding	Pcbp2	utr5	ENSMUSG00000056851	ProperStrand	164	1	-8.1034
chr14	105660914	105660934	protein_coding	Ndfip2	intron	ENSMUSG00000053253	NonProperStrand	2	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-15.2057
chr11	6428076	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr19	8800087	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	6	-1.1273
chr8	98789193	98789210	LTR	IAPEY2_LTR	ERVK	chr8IAPEY2_LTR98789183	ProperStrand	1	chr11	6428109	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-inf
chrX	34622916	34622956	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	chr13	23528217	23528284	tRNA	tRNA103-LysCTT	.	547758	ProperStrand	180	1	-1.3713
chr17	45561547	45562849	protein_coding	Cdc5l	exon	ENSMUSG00000023932	ProperStrand	59	chr9	15118282	15118321	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.4975
chr2	90235302	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr13	55574043	55574125	protein_coding	Prr7	exon	ENSMUSG00000034686	ProperStrand	15	4	-inf
chr17	21091666	21092754	protein_coding	Ppp2r1a	exon	ENSMUSG00000007564	NonProperStrand	5	chr14	33005138	33005238	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	2	-14.6999
chr2	158205317	158205397	snoRNA	ENSMUSG00000064585_SNORA71	.	ENSMUSG00000064585	ProperStrand	418	chr11	97642990	97643080	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	13	-11.4526
chr11	23178827	23178885	protein_coding	Xpo1	exon	ENSMUSG00000020290	ProperStrand	123	chr15	96826829	96826857	protein_coding	Slc38a4	utr3	ENSMUSG00000022464	ProperStrand	139	3	-19.2553
chr10	76541031	76541206	protein_coding	Col18a1	exon	ENSMUSG00000001435	ProperStrand	287	chr8	13416898	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-3.4539
chr16	87425939	87425957	protein_coding	Ltn1	exon	ENSMUSG00000052299	ProperStrand	49	chr15	79913305	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-3.9702
chr2	75499771	75499850	protein_coding	Hnrnpa3	exon	ENSMUSG00000059005	ProperStrand	289	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-2.0530
chr5	146186199	146186279	LINE	Lx2	L1	chr5Lx2146185569	NonProperStrand	1	chr6	17316665	17316755	antisense	Gm15581	.	ENSMUSG00000085264	ProperStrand	5	1	-inf
chr8	46125267	46125943	protein_coding	Fat1	exon	ENSMUSG00000070047	ProperStrand	306	chr2	158182155	158182222	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-2.0525
chr1	182797727	182797843	protein_coding	BC031781	utr3	ENSMUSG00000038806	ProperStrand	64	chr4	131908689	131908744	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-6.8619
chr5	136385441	136385507	protein_coding	Ywhag	utr3	ENSMUSG00000051391	ProperStrand	142	chr15	34370616	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-2.0475
chr8	97624063	97624163	protein_coding	Kifc3	utr3	ENSMUSG00000031788	ProperStrand	13	chr11	68886990	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-7.1671
chr17	56564804	56564894	protein_coding	Ptprs	exon	ENSMUSG00000013236	ProperStrand	152	chr11	83107809	83107889	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	1	-6.9844
chr17	25081245	25081305	protein_coding	Hn1l	utr3	ENSMUSG00000024165	ProperStrand	45	chr16	23111438	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-4.8312
chr9	59526012	59526632	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr5	37186929	37186945	protein_coding	Mrfap1	utr3	ENSMUSG00000055302	ProperStrand	62	2	-11.4372
chr16	91630375	91630424	protein_coding	Gart	exon	ENSMUSG00000022962	ProperStrand	200	chr4	100449419	100449436	protein_coding	Cachd1	utr5	ENSMUSG00000028532	NonProperStrand	18	1	-13.3412
chr2	155645870	155645960	protein_coding	Eif6	intron	ENSMUSG00000027613	ProperStrand	42	chr11	97643009	97643090	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	7	-21.2613
chr17	71744164	71744224	protein_coding	Smchd1	exon	ENSMUSG00000024054	ProperStrand	79	chr7	52381973	52381993	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-6.1683
chr12	109345842	109345883	protein_coding	Setd3	exon	ENSMUSG00000056770	ProperStrand	21	chr4	131866159	131866249	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-9.3420
chr7	51828028	51828044	protein_coding	Napsa	exon	ENSMUSG00000002204	ProperStrand	88	chr19	47737088	47737106	protein_coding	Col17a1	intron	ENSMUSG00000025064	ProperStrand	10	1	-16.2016
chr2	164250347	164250583	protein_coding	Sdc4	utr3	ENSMUSG00000017009	ProperStrand	177	chr11	102294587	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	3	-15.2858
chr10	41171692	41171737	protein_coding	Zbtb24	exon	ENSMUSG00000019826	ProperStrand	17	chr2	89368462	89368478	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	2	-inf
chr15	99556355	99556372	protein_coding	2310016M24Rik	intron	ENSMUSG00000023020	NonProperStrand	7	chr7	52382753	52382832	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-11.1570
chr7	31895791	31899711	protein_coding	Hpn	utr5	ENSMUSG00000001249	ProperStrand	126	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.7678
chr6	115085043	115085060	protein_coding	Syn2	utr5	ENSMUSG00000009394	NonProperStrand	8	chr9	70960077	70960093	protein_coding	Aqp9	exon	ENSMUSG00000032204	NonProperStrand	118	1	-16.0702
chr16	8690706	8690778	protein_coding	Usp7	utr3	ENSMUSG00000022710	ProperStrand	118	chr7	52381719	52381799	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-6.2341
chr18	67989539	67994161	protein_coding	Cep192	exon	ENSMUSG00000024542	ProperStrand	59	chr10	23505200	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.2562
chr11	87797495	87800766	protein_coding	Dynll2	utr5	ENSMUSG00000020483	ProperStrand	22	chr9	121823892	121823908	protein_coding	Cyp8b1	exon	ENSMUSG00000050445	NonProperStrand	101	1	-14.3004
chr13	24116272	24116303	protein_coding	Lrrc16a	exon	ENSMUSG00000021338	ProperStrand	12	chr16	23110965	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.4686
chr16	57391750	57391793	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr15	88998259	88998349	protein_coding	Plxnb2	utr5	ENSMUSG00000036606	ProperStrand	119	1	-6.4342
chr12	37542837	37542860	miRNA	Mir5099	.	ENSMUSG00000092998	ProperStrand	13	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-10.3360
chr12	81322485	81322575	protein_coding	Actn1	intron	ENSMUSG00000015143	ProperStrand	128	chr10	127474671	127474733	protein_coding	Naca	intron	ENSMUSG00000061315	ProperStrand	50	7	-inf
chr15	71837585	71839854	protein_coding	Col22a1	exon	ENSMUSG00000079022	ProperStrand	17	chr9	120037908	120037944	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	3	-16.4344
chr1	91354989	91355089	protein_coding	Agap1	intron	ENSMUSG00000055013	ProperStrand	229	chr8	32260335	32260359	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-2.2080
chr14	56159294	56159312	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	chr1	162966815	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-3.9748
chr11	35465269	35465285	protein_coding	Slit3	exon	ENSMUSG00000056427	NonProperStrand	45	chr5	121655100	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.2899
chr4	137063788	137063936	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	chr9	64143852	64143875	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-2.7886
chr16	13401351	13401370	protein_coding	Mkl2	exon	ENSMUSG00000009569	ProperStrand	55	chr9	45198928	45199653	protein_coding	Fxyd6	exon	ENSMUSG00000066705	NonProperStrand	108	1	-12.3076
chr11	10977541	10977631	LINE	Lx5	L1	chr11Lx510977527	NonProperStrand	1	chr11	10977288	10977368	LTR	RMER17C	ERVK	chr11RMER17C10976982	ProperStrand	1	1	-inf
chr1	77380158	77384433	protein_coding	Epha4	exon	ENSMUSG00000026235	ProperStrand	57	chr16	23111694	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	8	-17.7232
chr14	76247953	76247981	protein_coding	Tpt1	utr3	ENSMUSG00000060126	ProperStrand	236	chr8	129468837	129468876	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-1.9748
chr10	80955815	80955860	protein_coding	Ncln	exon	ENSMUSG00000020238	ProperStrand	18	chr18	35716763	35716858	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-10.6484
chr2	26493427	26493517	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr2	32818885	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	4	-1.3652
chr2	178194847	178194864	protein_coding	Cdh26	exon	ENSMUSG00000039155	NonProperStrand	77	chr11	6428095	6428165	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-7.1265
chr5	130300519	130300560	protein_coding	Cct6a	intron	ENSMUSG00000029447	ProperStrand	128	chr16	23110527	23110581	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-2.4493
chr6	29127485	29127502	protein_coding	Prrt4	exon	ENSMUSG00000079654	ProperStrand	23	chr2	26494763	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.9167
chr2	90235295	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	23825941	23825957	protein_coding	Kcnh2	exon	ENSMUSG00000038319	ProperStrand	242	4	-7.5079
chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	chr17	33088738	33088755	pseudogene	Cyp4f41-ps	.	ENSMUSG00000024295	NonProperStrand	9	1	-13.1569
chr7	51850999	51851016	protein_coding	Kcnc3	exon	ENSMUSG00000062785	NonProperStrand	7	chr19	8799026	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-10.2203
chr11	116629616	116629706	protein_coding	St6galnac1	intron	ENSMUSG00000009588	NonProperStrand	1	chr11	116602852	116602932	pseudogene	Gm11735	.	ENSMUSG00000078586	NonProperStrand	1	1	-inf
chr9	57385425	57385441	protein_coding	2310046O06Rik	utr5	ENSMUSG00000032305	ProperStrand	135	chr2	130102053	130102103	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-3.8085
chr10	79872608	79872626	protein_coding	Tcf3	utr3	ENSMUSG00000020167	ProperStrand	73	chr8	3568023	3568039	protein_coding	C330021F23Rik	utr5	ENSMUSG00000065952	NonProperStrand	85	1	-12.2192
chr1	114648853	114648943	LINE	L1_Mur2	L1	chr1L1_Mur2114648514	ProperStrand	1	chr1	114649172	114649252	Simple_repeat	(TC)n	Simple_repeat	chr1(TC)n114649121	NonProperStrand	1	1	-inf
chr6	120702691	120704546	protein_coding	Cecr2	exon	ENSMUSG00000071226	ProperStrand	39	chr5	130300495	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.2732
chr18	10354222	10354238	protein_coding	Greb1l	intron	ENSMUSG00000042942	ProperStrand	23	chr4	131908809	131908867	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.7500
chr19	6368363	6371280	protein_coding	Sf1	exon	ENSMUSG00000024949	ProperStrand	251	chr11	86570879	86570959	protein_coding	Cltc	utr5	ENSMUSG00000047126	ProperStrand	319	1	-7.1109
chr3	152450608	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	chr15	79910957	79913391	protein_coding	Rpl3	exon	ENSMUSG00000060036	ProperStrand	8342	3	-1.4678
chr10	72505711	72505791	LTR	ORR1A3-int	MaLR	chr10ORR1A3-int72505588	ProperStrand	1	chr10	72505859	72505949	LTR	RLTR25B	ERVK	chr10RLTR25B72505639	ProperStrand	1	1	-inf
chrX	90659795	90659838	protein_coding	Pola1	intron	ENSMUSG00000006678	ProperStrand	83	chr4	131866184	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	5	-13.4785
chr3	22109346	22109388	protein_coding	Tbl1xr1	utr3	ENSMUSG00000027630	ProperStrand	44	chr11	69481332	69481420	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.7716
chr1	89681340	89681396	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	chr1	9932548	9932626	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-0.7548
chr17	13184993	13185013	protein_coding	Wtap	utr5	ENSMUSG00000060475	NonProperStrand	8	chr5	130300447	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	NonProperStrand	11	1	-18.8752
chr1	155287324	155287354	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	chr15	79908984	79909022	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-1.5981
chr7	110114018	110114034	protein_coding	Olfr576	exon	ENSMUSG00000073962	NonProperStrand	79	chr4	131865866	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.3598
chr11	119759963	119759979	protein_coding	Rptor	utr3	ENSMUSG00000025583	ProperStrand	76	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.4149
chr7	99808312	99808365	protein_coding	Pcf11	exon	ENSMUSG00000041328	ProperStrand	27	chr3	68889147	68889202	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	6	-19.5992
chr4	43943351	43943367	protein_coding	Reck	intron	ENSMUSG00000028476	NonProperStrand	36	chr9	120038466	120038516	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.9810
chr6	124350164	124353138	protein_coding	Pex5	exon	ENSMUSG00000005069	ProperStrand	27	chr12	106269323	106269403	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	3	-13.2777
chr2	26493401	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr15	100358955	100358972	protein_coding	Tfcp2	exon	ENSMUSG00000009733	NonProperStrand	77	6	-inf
chr10	126506506	126506556	protein_coding	Tspan31	exon	ENSMUSG00000006736	ProperStrand	9	chr17	35088957	35088997	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-9.7190
chr19	40194280	40194311	LINE	Lx2	L1	chr19Lx240189486	ProperStrand	24	chr14	33005139	33005238	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	6	-21.3086
chr12	37542835	37542881	DNA	FordPrefect	Tip100	chr12FordPrefect37542835	ProperStrand	4	chr17	24857794	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-12.7746
chr11	57822705	57822729	protein_coding	Larp1	exon	ENSMUSG00000037331	ProperStrand	201	chr2	26493362	26493494	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	7	-13.2759
chr15	39447844	39447861	protein_coding	Rims2	exon	ENSMUSG00000037386	ProperStrand	5	chr3	108357449	108357485	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-9.6221
chr16	3980077	3980177	protein_coding	Slx4	exon	ENSMUSG00000039738	NonProperStrand	6	chr7	112533563	112533579	protein_coding	Fam160a2	exon	ENSMUSG00000044465	ProperStrand	85	2	-19.0037
chr17	79336220	79336320	protein_coding	Cebpz	exon	ENSMUSG00000024081	ProperStrand	14	chr3	123210881	123210930	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-4.7278
chr7	20287117	20287170	protein_coding	Tomm40	exon	ENSMUSG00000002984	ProperStrand	57	chr9	59518476	59518516	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	2	-11.6911
chr8	54599641	54599658	protein_coding	Aga	exon	ENSMUSG00000031521	ProperStrand	7	chr16	23111384	23111415	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-5.0992
chr11	69133393	69133422	protein_coding	Cntrob	exon	ENSMUSG00000032782	ProperStrand	19	chr1	72757883	72758273	protein_coding	Rpl37a	exon	ENSMUSG00000046330	ProperStrand	94	1	-14.7296
chr1	88247737	88247776	protein_coding	Ncl	intron	ENSMUSG00000026234	ProperStrand	1184	chr1	88247800	88247864	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	5	-3.5417
chr6	116589139	116589229	protein_coding	Rassf4	intron	ENSMUSG00000042129	ProperStrand	20	chr11	69481348	69481428	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.2928
chr8	80206657	80206673	lincRNA	4933431K23Rik	intron	ENSMUSG00000086451	ProperStrand	4	chr4	131865866	131865910	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.0048
chr10	116812970	116813078	protein_coding	Cpsf6	intron	ENSMUSG00000055531	ProperStrand	86	chr15	5068433	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-5.3620
chr4	130223201	130223234	protein_coding	Pum1	intron	ENSMUSG00000028580	NonProperStrand	5	chr3	123210894	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-6.8746
chr12	113851560	113851612	protein_coding	Inf2	intron	ENSMUSG00000037679	ProperStrand	12	chr14	61398407	61398423	protein_coding	C1qtnf9	exon	ENSMUSG00000071347	ProperStrand	187	1	-14.3257
chr2	119469631	119472900	protein_coding	Nusap1	exon	ENSMUSG00000027306	ProperStrand	11	chr10	116799075	116799165	protein_coding	Cpsf6	exon	ENSMUSG00000055531	ProperStrand	86	1	-16.0471
chr5	65781985	65782085	protein_coding	Rpl9	exon	ENSMUSG00000047215	ProperStrand	113	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-5.9521
chr8	3642156	3642172	protein_coding	Stxbp2	intron	ENSMUSG00000004626	NonProperStrand	73	chr15	98867467	98867510	protein_coding	Tuba1c	exon	ENSMUSG00000043091	ProperStrand	28	1	-14.4563
chr6	83652915	83653005	antisense	Vax2os2	.	ENSMUSG00000092177	ProperStrand	7	chr3	123210899	123210979	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-6.1463
chr1	71683878	71683930	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr7	150717308	150717408	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-0.8521
chr3	105758905	105758929	protein_coding	Atp5f1	exon	ENSMUSG00000000563	ProperStrand	28	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.2442
chrX	71517857	71517937	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	chr13	49779703	49779793	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-0.9927
chr10	79855599	79855645	protein_coding	Mbd3	utr3	ENSMUSG00000035478	ProperStrand	27	chr16	23111374	23111464	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-4.4613
chr15	84685466	84685487	protein_coding	Phf21b	utr5	ENSMUSG00000016624	NonProperStrand	6	chr11	62418033	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	2	-16.3851
chr19	6128020	6128039	protein_coding	Snx15	intron	ENSMUSG00000024787	NonProperStrand	5	chr2	26494708	26494758	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	4	-18.7502
chr5	54389948	54389965	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	chr9	15119292	15119425	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	13	-19.8812
chr10	88206547	88206592	protein_coding	Arl1	utr3	ENSMUSG00000060904	ProperStrand	15	chr10	23505152	23505209	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.5481
chr3	96364476	96365355	protein_coding	Txnip	utr3	ENSMUSG00000038393	ProperStrand	172	chr9	120038570	120038650	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	4	-5.6494
chr9	58159696	58159713	protein_coding	Loxl1	exon	ENSMUSG00000032334	NonProperStrand	13	chr9	15119648	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.5260
chr16	23110984	23111010	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr7	52301756	52302315	protein_coding	Prr12	exon	ENSMUSG00000046574	ProperStrand	86	1	-8.2932
chr13	59480860	59480882	LTR	RMER19C	ERVK	chr13RMER19C59480636	NonProperStrand	2	chr4	131865855	131865901	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-8.7800
chr7	34933062	34933093	protein_coding	Uba2	intron	ENSMUSG00000052997	ProperStrand	165	chr12	17552950	17553008	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-3.1885
chr4	148960971	148960989	protein_coding	Clstn1	intron	ENSMUSG00000039953	NonProperStrand	4	chr8	73419657	73419724	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-8.6136
chr5	118376503	118376519	protein_coding	Nos1	exon	ENSMUSG00000029361	NonProperStrand	237	chr6	131326072	131326089	protein_coding	Csda	exon	ENSMUSG00000030189	ProperStrand	86	1	-9.8358
chr13	55105923	55105939	protein_coding	Unc5a	exon	ENSMUSG00000025876	NonProperStrand	96	chr17	24857274	24857297	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	1	-8.7113
chr19	5862497	5862516	protein_coding	Frmd8	intron	ENSMUSG00000024816	ProperStrand	7	chr7	134014072	134014124	protein_coding	Taok2	exon	ENSMUSG00000059981	ProperStrand	47	1	-18.6242
chr16	91681630	91681730	protein_coding	Donson	intron	ENSMUSG00000022960	ProperStrand	9	chr2	26768405	26768433	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-9.4464
chr7	129068988	129079340	protein_coding	Cog7	exon	ENSMUSG00000034951	ProperStrand	29	chr10	23505152	23505234	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-4.2149
chr11	101321826	101321899	protein_coding	Vat1	exon	ENSMUSG00000034993	ProperStrand	69	chr17	24857796	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	5	-10.1906
chr17	45705946	45708113	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr6	115758018	115758122	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	2	-0.7379
chr17	31722744	31722760	protein_coding	Pknox1	intron	ENSMUSG00000006705	ProperStrand	110	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-3.9618
chr2	158182156	158182280	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	chr17	24857717	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	39	-1.4615
chr8	85288316	85288760	protein_coding	Zfp330	exon	ENSMUSG00000031711	ProperStrand	75	chr5	108336364	108336454	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-4.4526
chr17	29237427	29237464	protein_coding	Cdkn1a	utr3	ENSMUSG00000023067	ProperStrand	25	chr16	23109064	23109091	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	2	-14.3729
chr6	86326547	86328755	protein_coding	Snrpg	exon	ENSMUSG00000057278	ProperStrand	12	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.3856
chr3	94872080	94872138	protein_coding	Pip5k1a	exon	ENSMUSG00000028126	ProperStrand	47	chr10	63070812	63070829	protein_coding	Ctnna3	intron	ENSMUSG00000060843	ProperStrand	66	1	-13.6153
chr12	81275145	81275480	protein_coding	Actn1	exon	ENSMUSG00000015143	ProperStrand	128	chr7	117190032	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	5	-9.9680
chr11	106172688	106172705	protein_coding	Cd79b	utr3	ENSMUSG00000040592	NonProperStrand	1	chr4	155542797	155542857	protein_coding	Agrn	intron	ENSMUSG00000041936	ProperStrand	175	1	-inf
chr4	43505656	43505751	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr11	106851582	106851610	protein_coding	Kpna2	exon	ENSMUSG00000018362	ProperStrand	70	3	-7.2336
chr9	31164912	31166593	protein_coding	Prdm10	exon	ENSMUSG00000042496	NonProperStrand	6	chr9	15119730	15119769	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-7.1405
chr4	131399490	131399506	protein_coding	Mecr	exon	ENSMUSG00000028910	NonProperStrand	109	chr4	153534526	153534542	protein_coding	Tprgl	exon	ENSMUSG00000029030	ProperStrand	50	1	-12.4813
chr3	106535866	106535886	protein_coding	4933421E11Rik	exon	ENSMUSG00000056260	ProperStrand	18	chr9	45200334	45203102	protein_coding	Fxyd6	utr3	ENSMUSG00000066705	ProperStrand	30	1	-17.2232
chr9	21823257	21823273	protein_coding	Elavl3	exon	ENSMUSG00000003410	NonProperStrand	137	chr1	88252838	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-5.0239
chr9	118205143	118205233	LINE	L1MD	L1	chr9L1MD118205073	NonProperStrand	1	chr9	119741407	119741487	LINE	Lx8	L1	chr9Lx8119741371	NonProperStrand	1	1	-inf
chr4	124796957	124796973	protein_coding	Zc3h12a	exon	ENSMUSG00000042677	ProperStrand	37	chr11	106362342	106362365	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-6.7998
chr5	125097373	125198928	protein_coding	Atp6v0a2	exon	ENSMUSG00000038023	ProperStrand	31	chr15	34370550	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-7.9713
chr9	108844821	108844911	protein_coding	Uqcrc1	intron	ENSMUSG00000025651	ProperStrand	43	chr19	8800377	8800457	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-4.1536
chr7	20282342	20282370	protein_coding	Apoe	exon	ENSMUSG00000002985	ProperStrand	231	chr17	71990923	71990999	snoRNA	ENSMUSG00000092713_CT010429.1	.	ENSMUSG00000092713	ProperStrand	182	1	-8.3891
chr11	4715004	4715023	protein_coding	Nf2	intron	ENSMUSG00000009073	ProperStrand	72	chr3	34550016	34550069	protein_coding	Sox2	exon	ENSMUSG00000074637	ProperStrand	299	1	-9.7283
chr14	71005755	71012508	protein_coding	Epb4.9	exon	ENSMUSG00000022099	ProperStrand	48	chr1	24621387	24621467	protein_coding	Gm10925	intron	ENSMUSG00000090378	ProperStrand	320	1	-10.4082
chrX	19683228	19683244	protein_coding	Slc9a7	exon	ENSMUSG00000037341	NonProperStrand	136	chr12	112779147	112779191	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-3.2433
chr5	75775079	75775096	LTR	RMER17C	ERVK	chr5RMER17C75774880	NonProperStrand	2	chr1	115800639	115800664	lincRNA	9330185C12Rik	intron	ENSMUSG00000086520	ProperStrand	45	1	-19.7664
chr14	76510999	76511088	protein_coding	Nufip1	exon	ENSMUSG00000022009	ProperStrand	12	chr15	83770046	83770063	protein_coding	Efcab6	intron	ENSMUSG00000022441	ProperStrand	60	1	-16.6116
chr15	74392750	74392768	protein_coding	Bai1	intron	ENSMUSG00000034730	NonProperStrand	56	chr19	8963027	8963127	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	4	-8.7546
chr3	103767605	103767664	protein_coding	Rsbn1	utr3	ENSMUSG00000044098	ProperStrand	32	chr9	120039540	120039568	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-4.4995
chr3	129336525	129336615	protein_coding	Elovl6	utr3	ENSMUSG00000041220	ProperStrand	59	chr15	34370546	34370626	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-3.5802
chr7	117189977	117190054	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	chr16	87419205	87419295	snoRNA	ENSMUSG00000065647_SNORA2	.	ENSMUSG00000065647	ProperStrand	123	1	-2.0878
chr5	138723220	138723850	protein_coding	Stag3	exon	ENSMUSG00000036928	ProperStrand	53	chr17	24857781	24857852	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.5071
chr7	148043216	148043234	protein_coding	Ric8	utr5	ENSMUSG00000025485	NonProperStrand	1	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-inf
chr1	63225921	63226034	protein_coding	Eef1b2	exon	ENSMUSG00000025967	ProperStrand	106	chr4	3762227	3762293	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	1	-8.3497
chr1	34249617	34249707	protein_coding	Dst	utr5	ENSMUSG00000026131	ProperStrand	461	chr1	89681187	89681267	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	40	-inf
chr9	72569357	72569447	protein_coding	Nedd4	exon	ENSMUSG00000032216	ProperStrand	308	chr3	108357584	108357664	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	7	-13.2231
chrX	98640037	98640641	protein_coding	Nono	exon	ENSMUSG00000031311	ProperStrand	102	chr1	162966816	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	5	-19.2422
chr6	7626287	7627301	protein_coding	Asns	exon	ENSMUSG00000029752	ProperStrand	59	chr7	29868640	29870768	protein_coding	Ryr1	exon	ENSMUSG00000030592	ProperStrand	27	1	-14.9523
chr17	35032616	35032716	protein_coding	Zbtb12	exon	ENSMUSG00000049823	ProperStrand	6	chr16	23110456	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-6.9463
chr17	56452015	56452127	protein_coding	Uhrf1	intron	ENSMUSG00000001228	ProperStrand	229	chr5	149153577	149153613	protein_coding	Slc7a1	exon	ENSMUSG00000041313	ProperStrand	65	3	-19.9357
chr16	57391759	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr16	62734428	62734465	protein_coding	Nsun3	utr3	ENSMUSG00000050312	ProperStrand	5	1	-12.9513
chr15	103023224	103023301	protein_coding	Cbx5	utr3	ENSMUSG00000009575	ProperStrand	98	chr11	77995191	77995242	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-5.2227
chr12	111929694	111929712	protein_coding	Hsp90aa1	utr3	ENSMUSG00000021270	ProperStrand	751	chr16	32670083	32670142	protein_coding	Tnk2	exon	ENSMUSG00000022791	ProperStrand	86	1	-7.5411
chr11	97530870	97531572	protein_coding	Mllt6	exon	ENSMUSG00000038437	ProperStrand	110	chr15	79913288	79913313	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.5108
chr7	116664100	116665133	protein_coding	Rpl27a	exon	ENSMUSG00000046364	ProperStrand	149	chr10	39978426	39978485	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-3.7238
chr9	40612282	40612341	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr3	116126898	116126914	protein_coding	Cdc14a	utr5	ENSMUSG00000033502	ProperStrand	29	1	-9.6030
chr2	24905620	24905779	protein_coding	Pnpla7	exon	ENSMUSG00000036833	ProperStrand	13	chr1	36161375	36161402	protein_coding	Hs6st1	utr3	ENSMUSG00000045216	ProperStrand	63	1	-16.3547
chr15	101858831	101858921	protein_coding	Krt18	exon	ENSMUSG00000023043	ProperStrand	6	chr18	35716786	35716866	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-6.6008
chr13	100201168	100201238	protein_coding	Mtap1b	exon	ENSMUSG00000052727	ProperStrand	76	chr17	35087895	35087923	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-4.7431
chr1	162968442	162968488	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	chr7	51505532	51505568	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	1	-1.9225
chr7	150717297	150717425	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	chr2	26494708	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	21	-1.9770
chr4	43505839	43505930	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr4	61865630	61865655	protein_coding	Zfp37	exon	ENSMUSG00000028389	ProperStrand	6	6	-inf
chr2	49556555	49556588	protein_coding	Kif5c	exon	ENSMUSG00000026764	ProperStrand	10	chr4	131908236	131908348	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-7.7635
chr11	102294588	102294611	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr14	33005038	33005237	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	11	-14.2227
chrX	71696170	71696235	protein_coding	Ikbkg	utr3	ENSMUSG00000004221	ProperStrand	9	chr2	145076805	145209251	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-11.6017
chr11	97891534	97891624	protein_coding	Rpl19	intron	ENSMUSG00000017404	ProperStrand	120	chr18	35716764	35716844	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.1329
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr7	38354919	38354935	protein_coding	Zfp536	exon	ENSMUSG00000043456	NonProperStrand	236	2	-9.7428
chr7	87226728	87226818	protein_coding	Zfp710	exon	ENSMUSG00000048897	ProperStrand	229	chr9	15119646	15119726	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	4	-3.5800
chr3	156224612	156224628	lincRNA	4930570G19Rik	exon	ENSMUSG00000085084	ProperStrand	326	chr2	130101241	130101308	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-3.3488
chr2	31529066	31529087	protein_coding	Exosc2	intron	ENSMUSG00000039356	ProperStrand	39	chr1	88252838	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	4	-19.1314
chr9	123389088	123389165	protein_coding	Limd1	exon	ENSMUSG00000025239	ProperStrand	3	chrX	136242613	136242631	protein_coding	Tbc1d8b	intron	ENSMUSG00000042473	NonProperStrand	27	1	-21.2276
chr18	12340140	12340157	protein_coding	3110002H16Rik	exon	ENSMUSG00000024410	ProperStrand	9	chr1	133252362	133252451	protein_coding	Srgap2	intron	ENSMUSG00000026425	ProperStrand	299	4	-19.0703
chr11	31701532	31701550	lincRNA	D630024D03Rik	intron	ENSMUSG00000085772	ProperStrand	5	chr1	162966813	162966852	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-11.3963
chr15	66797508	66797526	protein_coding	Ndrg1	intron	ENSMUSG00000005125	ProperStrand	35	chr9	120038467	120038529	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.0343
chr13	98265811	98265827	lincRNA	Gm11019	exon	ENSMUSG00000078952	NonProperStrand	10	chr8	72287172	72287188	protein_coding	Zfp866	utr3	ENSMUSG00000043090	NonProperStrand	134	1	-15.3736
chr18	32283420	32284785	protein_coding	Proc	exon	ENSMUSG00000024386	ProperStrand	4	chr8	74008400	74008417	protein_coding	Ano8	exon	ENSMUSG00000034863	NonProperStrand	171	1	-16.8648
chr13	23662571	23662611	protein_coding	Hist1h2ae	utr3	ENSMUSG00000069272	ProperStrand	51	chr1	89681130	89681230	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-5.7593
chr5	34695672	34695708	protein_coding	Rnf4	utr3	ENSMUSG00000029110	ProperStrand	27	chr15	79913288	79913342	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-5.1173
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr6	70794802	70794820	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	2	-11.1969
chr9	78023109	78023150	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr11	107531486	107531586	protein_coding	Helz	exon	ENSMUSG00000020721	ProperStrand	60	1	-5.8778
chr2	24825186	24827046	protein_coding	Wdr85	exon	ENSMUSG00000026975	ProperStrand	323	chr17	35088971	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-2.7099
chr13	104613417	104613433	protein_coding	Erbb2ip	exon	ENSMUSG00000021709	ProperStrand	21	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-9.8582
chr1	180257477	180257557	protein_coding	Hnrnpu	intron	ENSMUSG00000039630	ProperStrand	286	chr1	11882925	11883015	protein_coding	A830018L16Rik	intron	ENSMUSG00000057715	NonProperStrand	3	1	-16.6605
chr11	102265167	102265396	protein_coding	Slc25a39	exon	ENSMUSG00000018677	ProperStrand	35	chr7	57041565	57041581	protein_coding	Prmt3	exon	ENSMUSG00000030505	ProperStrand	89	1	-13.6118
chr2	178194847	178194863	protein_coding	Cdh26	exon	ENSMUSG00000039155	NonProperStrand	77	chr5	147646745	147646845	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	1	-7.4608
chr2	177670926	177671026	protein_coding	Gm14326	utr3	ENSMUSG00000078862	NonProperStrand	1	chr11	68886972	68887033	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-inf
chr17	26097504	26097608	protein_coding	Solh	exon	ENSMUSG00000037326	ProperStrand	53	chr15	98350144	98350244	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-5.0002
chr11	63885336	63887052	protein_coding	Cox10	exon	ENSMUSG00000042148	NonProperStrand	187	chr11	6428099	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.3342
chr18	67564749	67564849	protein_coding	Afg3l2	utr3	ENSMUSG00000024527	ProperStrand	43	chr1	162967490	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-6.8835
chr1	34230972	34231040	protein_coding	Dst	exon	ENSMUSG00000026131	ProperStrand	461	chr16	19883898	19884021	protein_coding	A930003A15Rik	exon	ENSMUSG00000075330	ProperStrand	93	1	-8.3533
chr11	98570991	98571396	protein_coding	Med24	exon	ENSMUSG00000017210	ProperStrand	28	chr4	116828379	116828451	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	4	-20.1589
chr14	21511569	21511650	protein_coding	Sec24c	exon	ENSMUSG00000039367	ProperStrand	60	chr10	127521226	127521271	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	4	-inf
chr5	18732024	18732040	lincRNA	4921504A21Rik	exon	ENSMUSG00000084779	NonProperStrand	1	chr18	35714204	35714262	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-inf
chr16	32615321	32615411	protein_coding	Tfrc	exon	ENSMUSG00000022797	ProperStrand	71	chr19	8963087	8963165	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.9988
chr6	131330290	131330425	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	ProperStrand	408	chr15	34370583	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	3	-2.2405
chr1	133252344	133252403	protein_coding	Srgap2	intron	ENSMUSG00000026425	ProperStrand	299	chr1	162966812	162966856	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	5	-13.7873
chr13	73953430	73953530	protein_coding	Slc12a7	utr3	ENSMUSG00000017756	ProperStrand	80	chr18	35716808	35716877	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.7116
chr16	75757980	75757997	protein_coding	Hspa13	utr3	ENSMUSG00000032932	ProperStrand	7	chr9	15116994	15117044	snoRNA	ENSMUSG00000077614_SNORA40	.	ENSMUSG00000077614	ProperStrand	54	1	-18.1310
chr4	131893746	131908695	protein_coding	Rcc1	exon	ENSMUSG00000028896	ProperStrand	55	chr4	131908236	131908347	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-6.3694
chr19	36940593	36942196	protein_coding	Tnks2	exon	ENSMUSG00000024811	ProperStrand	133	chr8	121933984	121934000	protein_coding	Mlycd	exon	ENSMUSG00000074064	ProperStrand	6	2	-inf
chr14	15572354	15572371	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr1	181027187	181027205	protein_coding	Smyd3	intron	ENSMUSG00000055067	ProperStrand	231	1	-8.5845
chr6	113220547	113220586	protein_coding	Mtmr14	exon	ENSMUSG00000030269	ProperStrand	15	chr16	23111452	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-6.1656
chr4	57268565	57268583	protein_coding	Ptpn3	intron	ENSMUSG00000038764	ProperStrand	48	chr4	140121137	140121153	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	1	-12.1202
chr4	57706987	57707003	protein_coding	Palm2	intron	ENSMUSG00000090053	NonProperStrand	187	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-3.6671
chr17	71744246	71747935	protein_coding	Smchd1	exon	ENSMUSG00000024054	ProperStrand	79	chr16	23110916	23111010	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-3.1298
chr2	90235297	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr15	78259253	78259269	protein_coding	Kctd17	exon	ENSMUSG00000033287	NonProperStrand	26	2	-9.9405
chr2	130109497	130109513	protein_coding	Idh3b	exon	ENSMUSG00000027406	ProperStrand	146	chr4	138749257	138749320	protein_coding	Capzb	intron	ENSMUSG00000028745	ProperStrand	44	1	-12.1550
chr15	79255301	79255391	protein_coding	Csnk1e	exon	ENSMUSG00000022433	ProperStrand	59	chr9	120039411	120039458	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	1	-9.5574
chr13	120125116	120125134	protein_coding	Nnt	exon	ENSMUSG00000025453	ProperStrand	22	chr15	99070172	99070188	protein_coding	Kcnh3	exon	ENSMUSG00000037579	NonProperStrand	44	1	-15.9989
chr12	101101661	101101678	protein_coding	2610021K21Rik	intron	ENSMUSG00000021176	NonProperStrand	6	chr15	34370545	34370607	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-13.3025
chr6	113680435	113680772	protein_coding	Sec13	exon	ENSMUSG00000030298	ProperStrand	6	chr7	31402155	31408468	protein_coding	Cox6b1	exon	ENSMUSG00000036751	ProperStrand	23	1	-18.3661
chr3	157197294	157197311	protein_coding	Zranb2	utr5	ENSMUSG00000028180	ProperStrand	43	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.3073
chr8	87186635	87186725	protein_coding	Ier2	utr5	ENSMUSG00000053560	ProperStrand	22	chr9	120038469	120038549	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.9307
chr1	165710001	165710019	protein_coding	Kifap3	exon	ENSMUSG00000026585	ProperStrand	9	chrX	34622906	34623006	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-6.8852
chr9	103401280	103401296	protein_coding	Tmem108	exon	ENSMUSG00000042757	NonProperStrand	323	chr1	162966813	162966836	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-3.0614
chr4	128867196	128867212	protein_coding	Yars	exon	ENSMUSG00000028811	ProperStrand	131	chr11	6428060	6428088	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.8635
chr8	38049667	38049683	LTR	MLT1A0	MaLR	chr8MLT1A038049422	NonProperStrand	91	chr17	24857783	24857838	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.6326
chr1	45488603	45488620	protein_coding	Col5a2	intron	ENSMUSG00000026042	ProperStrand	184	chr7	140182121	140182208	protein_coding	Ctbp2	exon	ENSMUSG00000030970	ProperStrand	89	1	-10.2731
chr7	52958453	52958469	protein_coding	Car11	exon	ENSMUSG00000003273	NonProperStrand	250	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-3.1389
chr4	43510628	43510694	protein_coding-noncoding	E130306D19Rik	utr3	ENSMUSG00000051517	ProperStrand	4	chr15	79913288	79913333	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-14.9743
chr12	77724090	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	chr10	23505578	23505627	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-3.8011
chr2	32162200	32162216	protein_coding	Golga2	utr3	ENSMUSG00000002546	NonProperStrand	35	chr9	120038466	120038526	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.0343
chr1	173341933	173341949	protein_coding	Usf1	utr5	ENSMUSG00000026641	NonProperStrand	144	chr16	90386836	90386853	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	1	-10.4514
chr1	194571804	194571884	snRNA	ENSMUSG00000064881_U5	.	ENSMUSG00000064881	ProperStrand	187	chr4	116875159	116875249	snRNA	ENSMUSG00000070228_U5	.	ENSMUSG00000070228	ProperStrand	131	1	-9.4666
chr6	122275919	122275960	protein_coding	Phc1	exon	ENSMUSG00000040669	ProperStrand	158	chr5	130300470	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.0399
chr15	101029895	101029953	protein_coding	Acvr1b	intron	ENSMUSG00000000532	ProperStrand	259	chr7	150429747	150429763	protein_coding	Kcnq1	intron	ENSMUSG00000009545	NonProperStrand	133	1	-8.7866
chr9	26811306	26811345	protein_coding	Thyn1	exon	ENSMUSG00000035443	ProperStrand	13	chr16	23111377	23111467	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.8569
chr4	132530098	132530117	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	chr7	67123692	67123760	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	1	-5.8604
chr6	54988212	54996415	protein_coding	Gars	exon	ENSMUSG00000029777	ProperStrand	71	chr18	36885433	36885449	protein_coding	Cd14	exon	ENSMUSG00000051439	ProperStrand	65	1	-12.8153
chr18	21142122	21142138	protein_coding	Rnf125	utr3	ENSMUSG00000033107	ProperStrand	5	chr9	120037934	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-9.7957
chr5	127737478	127737494	antisense	1700085B03Rik	.	ENSMUSG00000087104	ProperStrand	55	chr7	29136525	29136633	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.5130
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr9	15130749	15131006	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	7	-19.9581
chr7	116078281	116078297	protein_coding	Eif3f	exon	ENSMUSG00000031029	NonProperStrand	20	chr11	69481333	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	8	-20.3960
chr2	25863417	25863442	protein_coding	Ubac1	exon	ENSMUSG00000036352	ProperStrand	25	chr11	69481335	69481433	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-4.8537
chrX	71589890	71589907	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr17	33960014	33960154	protein_coding	Rps28	utr3	ENSMUSG00000067288	ProperStrand	52	1	-10.4367
chr9	65127126	65127142	protein_coding	Cilp	exon	ENSMUSG00000042254	ProperStrand	212	chr10	127521199	127521269	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	1	-6.2871
chr11	106362327	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	chr1	59761674	59761716	snoRNA	ENSMUSG00000089093_Snord11	.	ENSMUSG00000089093	ProperStrand	193	1	-3.6089
chr6	88435849	88435865	protein_coding	Ruvbl1	exon	ENSMUSG00000030079	NonProperStrand	54	chr9	14629708	14629745	protein_coding	Mre11a	exon	ENSMUSG00000031928	ProperStrand	20	1	-15.7285
chr9	105830685	105830701	protein_coding	Col6a5	exon	ENSMUSG00000091345	NonProperStrand	6	chr2	166890562	166890582	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-12.3073
chr18	42713078	42713144	protein_coding	Tcerg1	exon	ENSMUSG00000024498	ProperStrand	210	chr16	23111701	23111791	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-0.8489
chr8	13876097	13876177	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	chr1	89681259	89681349	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	3	-1.7907
chr14	27815472	27815490	protein_coding	Hesx1	utr3	ENSMUSG00000040726	ProperStrand	17	chr4	131865855	131865965	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-13.3462
chr10	72131118	72131151	protein_coding	Zwint	utr3	ENSMUSG00000019923	ProperStrand	22	chr11	97642952	97643036	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-7.2420
chr2	127262307	127262351	protein_coding	Fahd2a	exon	ENSMUSG00000027371	ProperStrand	3	chr1	164650672	164650709	protein_coding	Prrc2c	exon	ENSMUSG00000040225	ProperStrand	413	1	-15.8460
chr7	52560178	52560194	protein_coding	Trpm4	utr3	ENSMUSG00000038260	ProperStrand	161	chr16	3856862	3856879	protein_coding	Zfp174	utr3	ENSMUSG00000054939	NonProperStrand	166	1	-9.2924
chr4	154010843	154010860	protein_coding	Prdm16	utr5	ENSMUSG00000039410	ProperStrand	44	chr15	82980133	82980211	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	2	-12.4190
chr1	153215208	153215246	protein_coding	1200016B10Rik	utr3	ENSMUSG00000052748	ProperStrand	16	chr17	24857792	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	4	-15.2775
chr3	104626773	104626848	protein_coding	Capza1	utr3	ENSMUSG00000070372	ProperStrand	42	chr11	97642952	97642993	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	4	-10.7062
chr9	118436411	118439395	protein_coding	Golga4	exon	ENSMUSG00000038708	ProperStrand	95	chr7	117189933	117190023	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.5188
chr15	85814186	85814203	protein_coding	Celsr1	intron	ENSMUSG00000016028	ProperStrand	56	chr4	131865867	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.8759
chr2	126464972	126465019	protein_coding	Gabpb1	exon	ENSMUSG00000027361	ProperStrand	54	chr8	13876117	13876207	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-7.3537
chr1	133252343	133252433	protein_coding	Srgap2	intron	ENSMUSG00000026425	ProperStrand	299	chr7	148634749	148634829	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-1.2830
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr2	155919901	155919924	protein_coding	Rbm12	utr3	ENSMUSG00000089824	ProperStrand	26	2	-15.0135
chr8	107825195	107825223	protein_coding	E2f4	exon	ENSMUSG00000014859	ProperStrand	32	chr10	23505152	23505250	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-6.0052
chr10	86161089	86161334	protein_coding	Hsp90b1	exon	ENSMUSG00000020048	ProperStrand	396	chr7	67125763	67125786	snoRNA	ENSMUSG00000089375_Snord107	.	ENSMUSG00000089375	ProperStrand	451	17	-19.7638
chr13	23643339	23643359	protein_coding	Hist1h4f	exon	ENSMUSG00000069274	ProperStrand	28	chr1	88252838	88252901	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-8.1654
chr1	174123979	174124721	protein_coding	Dcaf8	exon	ENSMUSG00000026554	ProperStrand	35	chr4	116826708	116826726	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	2	-12.5772
chr12	75266431	75266453	protein_coding	Syt16	intron	ENSMUSG00000044912	NonProperStrand	6	chr10	81028671	81028737	protein_coding	Aes	utr3	ENSMUSG00000054452	ProperStrand	34	1	-18.2219
chr12	86371608	86371708	protein_coding	Ylpm1	exon	ENSMUSG00000021244	ProperStrand	100	chr6	121624752	121624771	protein_coding	A2m	exon	ENSMUSG00000030111	ProperStrand	17	1	-14.8623
chr13	101460325	101462300	protein_coding	Ccdc125	exon	ENSMUSG00000048924	ProperStrand	6	chr1	162967118	162967180	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	5	-19.6406
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr7	150717332	150717422	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-0.7982
chr11	57347084	57347123	protein_coding	Mfap3	utr3	ENSMUSG00000020522	ProperStrand	91	chr7	116664841	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-3.3952
chr7	29244130	29244230	protein_coding	Lrfn1	exon	ENSMUSG00000030600	ProperStrand	19	chr16	23110986	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7016
chr13	105419300	105419316	LINE	Lx9	L1	chr13Lx9105418768	NonProperStrand	2	chr2	26768086	26768118	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	2	-inf
chr10	126742587	126742677	protein_coding	Mars	exon	ENSMUSG00000040354	ProperStrand	38	chr10	107800719	107800795	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	1	-8.9877
chr8	122052848	122052864	protein_coding	Mbtps1	exon	ENSMUSG00000031835	NonProperStrand	16	chr2	26494758	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-9.2847
chr5	121655016	121655051	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	chr1	39605591	39605696	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	6	-1.6408
chr9	20698814	20698870	protein_coding	Eif3g	utr3	ENSMUSG00000070319	ProperStrand	38	chr4	131865867	131865957	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.5179
chr2	50567137	50567227	LINE	L1_Mus2	L1	chr2L1_Mus250566433	NonProperStrand	1	chr2	50567496	50567576	LINE	L1_Mus2	L1	chr2L1_Mus250567157	NonProperStrand	1	1	-inf
chr15	88534050	88534103	protein_coding	Brd1	intron	ENSMUSG00000022387	ProperStrand	70	chr12	112215257	112215273	protein_coding	Ankrd9	exon	ENSMUSG00000037904	NonProperStrand	35	1	-14.0979
chr5	77715167	77715267	protein_coding	Rest	utr3	ENSMUSG00000029249	ProperStrand	136	chr1	162965981	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-2.1656
chr4	108953090	108953107	protein_coding	Eps15	intron	ENSMUSG00000028552	NonProperStrand	5	chr5	130300470	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-17.6113
chr3	97393843	97393900	protein_coding	Chd1l	exon	ENSMUSG00000028089	ProperStrand	15	chr5	122580412	122584741	protein_coding	Ccdc63	utr5	ENSMUSG00000043036	ProperStrand	120	1	-14.7446
chr6	120984129	120984145	protein_coding	Mical3	utr5	ENSMUSG00000003178	NonProperStrand	1	chr1	40053934	40053951	protein_coding	Map4k4	exon	ENSMUSG00000026074	ProperStrand	348	1	-inf
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr9	107522447	107537484	protein_coding	Gnai2	exon	ENSMUSG00000032562	ProperStrand	29	2	-13.3747
chr6	92192781	92192818	protein_coding	Trh	exon	ENSMUSG00000005892	ProperStrand	87	chr7	16524139	16524219	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	1	-8.9732
chr2	158185526	158185562	lincRNA	9430008C03Rik	exon	ENSMUSG00000085385	ProperStrand	1039	chr6	71832629	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-0.7882
chr3	97381375	97381475	protein_coding	Chd1l	intron	ENSMUSG00000028089	ProperStrand	15	chr19	8798486	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-7.9821
chr11	87240292	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	chrX	34622941	34623022	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-1.2885
chr15	91388527	91403521	protein_coding	Slc2a13	utr5	ENSMUSG00000036298	ProperStrand	22	chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	2	-15.4662
chr17	13115072	13115502	protein_coding	Tcp1	exon	ENSMUSG00000068039	ProperStrand	116	chr18	35716813	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.1777
chr3	55987229	55987247	protein_coding	Nbea	utr5	ENSMUSG00000027799	NonProperStrand	115	chr10	11063464	11063480	protein_coding	Epm2a	exon	ENSMUSG00000055493	ProperStrand	28	1	-13.5479
chr18	10052131	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr16	90775135	90776374	protein_coding	Urb1	exon	ENSMUSG00000039929	ProperStrand	71	1	-8.4638
chr5	86614439	86614455	protein_coding	Gnrhr	exon	ENSMUSG00000029255	NonProperStrand	13	chr4	131865855	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-7.6072
chr15	96522173	96522792	protein_coding	Slc38a2	exon	ENSMUSG00000022462	ProperStrand	133	chr9	105345359	105347571	protein_coding	Atp2c1	exon	ENSMUSG00000032570	ProperStrand	21	1	-13.8425
chr11	69779494	69779545	protein_coding	Cldn7	exon	ENSMUSG00000018569	ProperStrand	7	chr7	133939193	133939247	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	2	-19.6134
chr10	19970215	19970238	protein_coding	Mtap7	exon	ENSMUSG00000019996	ProperStrand	43	chr10	39978374	39978484	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	4	-18.6242
chr18	35714145	35714225	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	chr13	96100601	96100691	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	7	-3.1735
chr9	78023152	78023203	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr8	97764890	97764906	protein_coding	Cngb1	utr3	ENSMUSG00000031789	NonProperStrand	17	1	-8.4071
chr13	21284425	21284492	protein_coding	Trim27	exon	ENSMUSG00000021326	ProperStrand	28	chr1	88252838	88252870	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-8.1654
chr11	42440243	42440259	protein_coding	Gabrb2	exon	ENSMUSG00000007653	ProperStrand	248	chr15	82980191	82980231	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	2	-7.2764
chr17	23965848	23965866	protein_coding	Tceb2	exon	ENSMUSG00000055839	ProperStrand	12	chr1	162968226	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-10.0801
chr16	35981701	35981730	antisense	Gm15564	.	ENSMUSG00000086324	ProperStrand	6	chr7	52713969	52714492	protein_coding	Ftl1	exon	ENSMUSG00000050708	NonProperStrand	7	1	-19.6825
chr1	37529442	37529459	protein_coding	Mgat4a	intron	ENSMUSG00000026110	ProperStrand	16	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.1079
chr14	77424372	77424388	protein_coding	9030625A04Rik	utr3	ENSMUSG00000044350	NonProperStrand	152	chr10	90581241	90581282	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-3.0729
chr8	117238543	117238561	protein_coding	Wwox	intron	ENSMUSG00000004637	ProperStrand	41	chr7	29136525	29136556	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.0293
chr15	72530468	72530494	protein_coding	Trappc9	intron	ENSMUSG00000047921	ProperStrand	44	chr15	79908956	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	3	-14.0161
chr2	30172048	30172721	protein_coding	Nup188	exon	ENSMUSG00000052533	ProperStrand	96	chr7	88488630	88488663	protein_coding	Rps17	exon	ENSMUSG00000061787	ProperStrand	105	4	-21.2030
chr6	125564086	125566045	protein_coding	Vwf	exon	ENSMUSG00000001930	ProperStrand	20	chr7	146684406	146684425	protein_coding	Inpp5a	intron	ENSMUSG00000025477	ProperStrand	166	1	-13.4989
chr4	139572479	139572497	LTR	MERVL_2A-int	ERVL	chr4MERVL_2A-int139571531	ProperStrand	39	chr16	5032046	5036331	protein_coding	Glyr1	exon	ENSMUSG00000022536	ProperStrand	60	1	-14.1801
chr2	133378813	133378830	protein_coding	Bmp2	utr5	ENSMUSG00000027358	NonProperStrand	17	chr3	153573527	153573578	snoRNA	ENSMUSG00000064731_Snord45b	.	ENSMUSG00000064731	ProperStrand	205	1	-13.4153
chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	chr13	23662869	23662930	protein_coding	Hist1h2ae	exon	ENSMUSG00000069272	ProperStrand	51	1	-9.5358
chr14	76526084	76526100	protein_coding	Nufip1	exon	ENSMUSG00000022009	ProperStrand	12	chr3	68889321	68889369	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-6.3834
chr10	126532147	126532163	protein_coding	Os9	utr3	ENSMUSG00000040462	NonProperStrand	28	chr3	58950658	58950674	protein_coding	Med12l	intron	ENSMUSG00000056476	ProperStrand	18	1	-17.1454
chr8	4258677	4258713	protein_coding	Ctxn1	intron	ENSMUSG00000048644	ProperStrand	3	chr7	116663650	116663750	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-8.5982
chr7	52713355	52713405	protein_coding	Ftl1	utr3	ENSMUSG00000050708	ProperStrand	807	chr5	125884617	125884638	tRNA	tRNA1317-AlaTGC	.	1432050	ProperStrand	149	1	-6.3119
chr9	120482715	120482883	protein_coding	Rpl14	exon	ENSMUSG00000025794	ProperStrand	123	chr17	39985202	39985291	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-4.5400
chr16	35801655	35801671	protein_coding	Hspbap1	exon	ENSMUSG00000022849	ProperStrand	48	chr4	3762250	3762293	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	1	-9.9376
chr4	109014064	109014097	protein_coding	Eps15	intron	ENSMUSG00000028552	ProperStrand	15	chr4	132100612	132102619	protein_coding	Dnajc8	exon	ENSMUSG00000054405	ProperStrand	22	1	-18.3168
chr11	78082237	78082327	protein_coding	2610507B11Rik	exon	ENSMUSG00000010277	ProperStrand	246	chr14	76247818	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-1.7105
chr6	149310997	149311047	pseudogene	Gm15784	.	ENSMUSG00000081126	ProperStrand	1	chr4	131908356	131908438	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-inf
chr2	59231788	59231868	LINE	L1MDa	L1	chr2L1MDa59231811	ProperStrand	1	chr2	59231445	59231535	LTR	ORR1D2	MaLR	chr2ORR1D259231452	NonProperStrand	1	1	-inf
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr3	152951850	152951948	protein_coding	St6galnac3	intron	ENSMUSG00000052544	ProperStrand	19	3	-inf
chr9	44550634	44550746	protein_coding	Arcn1	utr3	ENSMUSG00000032096	ProperStrand	35	chr17	24857828	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.2429
chr1	129699309	129699389	protein_coding	Ccnt2	exon	ENSMUSG00000026349	ProperStrand	34	chr4	131865875	131865965	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-7.1127
chr2	26203131	26203147	protein_coding	Gpsm1	utr3	ENSMUSG00000026930	ProperStrand	93	chr11	116938594	116938684	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-5.3011
chr13	28843546	28843562	lincRNA	2610307P16Rik	intron	ENSMUSG00000085936	ProperStrand	154	chr5	122773160	122773176	protein_coding	Pptc7	utr3	ENSMUSG00000038582	NonProperStrand	19	2	-19.4021
chr2	32818916	32818948	protein_coding-noncoding	Rpl12	utr5	ENSMUSG00000038900	ProperStrand	68	chr5	108334210	108334322	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-4.5794
chr15	81782429	81783204	protein_coding	Pmm1	exon	ENSMUSG00000022474	ProperStrand	24	chr9	120038564	120038644	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.7604
chr9	44143013	44143113	protein_coding	H2afx	exon	ENSMUSG00000049932	ProperStrand	137	chr9	15118336	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-2.0326
chr3	87719381	87719461	protein_coding	Hdgf	utr3	ENSMUSG00000004897	ProperStrand	117	chr4	126559534	126559753	protein_coding	Zmym4	exon	ENSMUSG00000042446	ProperStrand	94	1	-11.0694
chr9	30966714	30966731	protein_coding	Aplp2	intron	ENSMUSG00000031996	NonProperStrand	5	chr9	57352481	57352545	protein_coding	Rpp25	exon	ENSMUSG00000062309	ProperStrand	2	2	-inf
chr10	18393547	18393563	protein_coding	D10Bwg1379e	intron	ENSMUSG00000019852	NonProperStrand	120	chr2	26493400	26493474	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-2.5011
chr3	14565746	14565762	protein_coding	Lrrcc1	exon	ENSMUSG00000027550	ProperStrand	39	chr18	35716790	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.9102
mmu-miR-1949	0	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr3	88603787	88603866	pseudogene	5830417I10Rik	.	ENSMUSG00000078684	ProperStrand	68	2	-12.6164
chr11	97073482	97073525	protein_coding	Npepps	intron	ENSMUSG00000001441	ProperStrand	30	chr19	24172606	24172696	protein_coding	Tjp2	exon	ENSMUSG00000024812	ProperStrand	63	1	-14.6252
chr11	64833898	64833954	protein_coding	Arhgap44	intron	ENSMUSG00000033389	ProperStrand	28	chr4	56910497	56910593	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-7.6263
chr11	3649570	3649587	protein_coding	Osbp2	intron	ENSMUSG00000020435	ProperStrand	60	chr16	23111448	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-2.4225
chr5	136385091	136387006	protein_coding	Ywhag	utr3	ENSMUSG00000051391	ProperStrand	142	chr11	97642983	97643090	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-2.2289
chr10	80642705	80642763	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr4	139016007	139016099	protein_coding	Ubr4	exon	ENSMUSG00000066036	ProperStrand	304	1	-3.0241
chr1	192303259	192303276	LINE	Lx8	L1	chr1Lx8192302525	NonProperStrand	1	chr4	131908825	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-inf
chr14	38656763	38656853	LINE	L1Md_A	L1	chr14L1Md_A38650796	ProperStrand	1	chr17	4082486	4082576	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	1	-inf
chr6	108543380	108543410	lincRNA	0610040F04Rik	intron	ENSMUSG00000087341	ProperStrand	13	chr4	43505654	43505782	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	6	-inf
chr2	18792111	18792128	protein_coding	Pip4k2a	intron	ENSMUSG00000026737	NonProperStrand	15	chr1	72871090	72871118	protein_coding	Igfbp2	utr5	ENSMUSG00000039323	ProperStrand	406	1	-12.3022
chr5	122065120	122065224	protein_coding	Acad12	intron	ENSMUSG00000042647	ProperStrand	63	chr4	131908689	131908743	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.1581
chr8	117238543	117238561	protein_coding	Wwox	intron	ENSMUSG00000004637	ProperStrand	41	chr14	31827478	31827516	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-7.7047
chr14	55525797	55525814	protein_coding	Slc22a17	utr3	ENSMUSG00000022199	NonProperStrand	3	chr10	61758470	61758486	protein_coding	Hk1	exon	ENSMUSG00000037012	ProperStrand	84	1	-inf
chrX	147019844	147019860	protein_coding	Apex2	exon	ENSMUSG00000025269	NonProperStrand	4	chr12	81537459	81537475	protein_coding	Dcaf5	utr5	ENSMUSG00000049106	ProperStrand	23	1	-18.9843
chr4	153534526	153534542	protein_coding	Tprgl	exon	ENSMUSG00000029030	ProperStrand	50	chr16	23110454	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.7776
chr6	124665421	124665521	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	chr1	173041574	173041649	tRNA	tRNA710-ValCAC	.	1559768	ProperStrand	206	1	-4.5275
chr11	55091391	55091409	protein_coding	Fat2	intron	ENSMUSG00000055333	NonProperStrand	11	chr16	23111734	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-16.3086
chr17	13168317	13185014	protein_coding	Wtap	utr5	ENSMUSG00000060475	ProperStrand	119	chr18	35716697	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	8	-12.8285
chr9	61761764	61762182	protein_coding	Rplp1	exon	ENSMUSG00000007892	ProperStrand	116	chr14	45949538	45949554	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	1	-8.6014
chr8	129913270	129913329	protein_coding	Pard3	exon	ENSMUSG00000025812	ProperStrand	44	chr10	23505152	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-3.1233
chr1	74470436	74470453	protein_coding	Vil1	exon	ENSMUSG00000026175	ProperStrand	68	chr7	117166721	117166760	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-4.5754
chr5	67072733	67072750	protein_coding	Uchl1	intron	ENSMUSG00000029223	ProperStrand	29	chr1	88252838	88252885	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-8.0945
chr3	108199366	108199456	protein_coding	Celsr2	exon	ENSMUSG00000068740	ProperStrand	47	chr19	8800355	8800457	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	41	-inf
chr7	75457646	75457664	lincRNA	Fam169b	intron	ENSMUSG00000074071	NonProperStrand	3	chr2	130102052	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-11.6725
chr9	120038328	120039249	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	chr10	39978394	39978484	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-2.0102
chr19	53549423	53549441	LTR	MTD	MaLR	chr19MTD53549362	ProperStrand	1	chr10	110918553	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-inf
chr11	100231574	100231590	protein_coding-noncoding	Jup	utr3	ENSMUSG00000001552	NonProperStrand	1	chr18	35716832	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-inf
chr18	12664736	12664752	protein_coding	Lama3	intron	ENSMUSG00000024421	ProperStrand	20	chr11	69483136	69483279	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.4692
chr13	80063475	80063491	SINE	B1_Mm	Alu	chr13B1_Mm80063450	ProperStrand	8	chr15	79913302	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-7.5918
chr2	125583969	125586010	protein_coding	Secisbp2l	exon	ENSMUSG00000035093	ProperStrand	26	chr16	23111754	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-5.7618
chr13	82729393	82729473	LINE	Lx3C	L1	chr13Lx3C82728539	ProperStrand	1	chr16	16054567	16054657	protein_coding	2310008H04Rik	intron	ENSMUSG00000041974	ProperStrand	30	1	-inf
chr13	23852876	23852976	protein_coding	Hist1h4a	exon	ENSMUSG00000060093	ProperStrand	12	chr5	74489606	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-6.9444
chr1	42955231	42955302	protein_coding	Mrps9	intron	ENSMUSG00000060679	ProperStrand	26	chr7	116663715	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.0328
chr2	90235303	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	36397059	36397149	protein_coding	Trim39	utr3	ENSMUSG00000045409	ProperStrand	1	1	-inf
chr4	115477260	115477340	protein_coding	Atpaf1	intron	ENSMUSG00000028710	ProperStrand	202	chr13	67393421	67393511	protein_coding	Zfp457	utr3	ENSMUSG00000055341	ProperStrand	2	1	-18.4389
chr3	22150293	22150373	misc_RNA	RNaseP_nuc	.	ENSMUSG00000087775	ProperStrand	5	chr11	87240296	87240386	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	1	-16.1139
chr2	120206989	120207068	protein_coding	Tmem87a	intron	ENSMUSG00000033808	ProperStrand	5	chr2	26494735	26494825	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-8.0805
chrX	151772839	151772856	protein_coding	Prdx4	exon	ENSMUSG00000025289	ProperStrand	29	chr4	131866209	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-8.3559
chr10	23505152	23505247	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	chr8	87574106	87574151	snoRNA	ENSMUSG00000077527_SNORD41	.	ENSMUSG00000077527	ProperStrand	29	1	-2.3586
chr1	8641116	8641196	protein_coding	Sntg1	intron	ENSMUSG00000025909	NonProperStrand	11	chr16	66992821	66992911	protein_coding	Cadm2	intron	ENSMUSG00000064115	NonProperStrand	21	1	-18.6067
chr16	17891301	17891318	protein_coding	Gm20518	intron	ENSMUSG00000092470	ProperStrand	14	chr4	131908773	131908811	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.6665
chr8	13876097	13876226	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	chr5	108334195	108336492	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	7	-4.5531
chr7	133941241	133942605	protein_coding	Aldoa	utr5	ENSMUSG00000030695	ProperStrand	721	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-2.5247
chr2	178033340	178033420	protein_coding	Phactr3	intron	ENSMUSG00000027525	ProperStrand	6	chr14	67403592	67403682	protein_coding	Gm10032	intron	ENSMUSG00000057913	NonProperStrand	1	1	-inf
chr13	99124241	99124257	protein_coding	Foxd1	utr5	ENSMUSG00000078302	NonProperStrand	12	chr1	162965531	162965550	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-6.4045
chr7	53334892	53336784	protein_coding	Nomo1	exon	ENSMUSG00000030835	ProperStrand	85	chr12	70259700	70260012	protein_coding	Rps29	exon	ENSMUSG00000034892	ProperStrand	124	1	-11.1555
chr5	148681033	148681070	protein_coding	Pomp	exon	ENSMUSG00000029649	ProperStrand	14	chr1	193437583	193438465	protein_coding	Ints7	exon	ENSMUSG00000037461	ProperStrand	108	1	-15.1037
chr3	63747167	63747184	protein_coding	Slc33a1	utr3	ENSMUSG00000027822	ProperStrand	10	chr7	133725239	133726517	protein_coding	Cln3	exon	ENSMUSG00000030720	ProperStrand	87	1	-16.2059
chr1	162966000	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	chr5	92485117	92485218	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	2	-0.7780
chrX	70237450	70237471	miRNA	Mir2137	.	ENSMUSG00000089357	ProperStrand	50	chr14	30800918	30800935	protein_coding	Actr8	intron	ENSMUSG00000015971	NonProperStrand	4	1	-19.2571
chr2	160191558	160191574	protein_coding	Mafb	exon	ENSMUSG00000074622	ProperStrand	31	chr14	52829460	52829569	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	4	-19.2474
chr19	5493917	5493966	protein_coding	Cfl1	utr3	ENSMUSG00000056201	ProperStrand	88	chr16	23111373	23111463	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.7796
chr13	46765144	46765160	protein_coding	C78339	exon	ENSMUSG00000069237	NonProperStrand	104	chrX	71517838	71517905	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-5.4650
chr6	67231785	67233966	protein_coding	Serbp1	utr3	ENSMUSG00000036371	ProperStrand	261	chr13	30338191	30338207	protein_coding	Mboat1	utr3	ENSMUSG00000038732	NonProperStrand	148	1	-8.5581
chr2	33501134	33501150	antisense	C130021I20Rik	.	ENSMUSG00000052951	NonProperStrand	6	chr11	84722945	84722961	protein_coding	Myo19	exon	ENSMUSG00000020527	ProperStrand	82	1	-17.3281
chr2	33930465	33930494	lincRNA	C230014O12Rik	intron	ENSMUSG00000087461	ProperStrand	4	chr11	97642952	97643080	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	4	-inf
chr3	152090875	152090961	protein_coding	Zzz3	exon	ENSMUSG00000039068	ProperStrand	26	chr16	23111393	23111451	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.5788
chrX	113265791	113265809	LTR	IAP-d-int	ERVK	chrXIAP-d-int113265587	ProperStrand	1	chr16	23110829	23110875	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	chr18	35714208	35714274	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-1.7905
chr14	22489328	22489428	protein_coding	Myst4	exon	ENSMUSG00000021767	ProperStrand	151	chr1	89673719	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	17	-20.3506
chr15	99256421	99256437	protein_coding	Nckap5l	exon	ENSMUSG00000023009	ProperStrand	51	chr17	24857825	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.5733
chr19	46155887	46156043	protein_coding	Nolc1	exon	ENSMUSG00000015176	ProperStrand	53	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	2	-8.9199
chr13	93526683	93526763	protein_coding	Thbs4	intron	ENSMUSG00000021702	ProperStrand	2	chr8	34412426	34412516	protein_coding	Wrn	intron	ENSMUSG00000031583	ProperStrand	7	1	-inf
chr11	53678378	53678460	protein_coding	Slc22a5	utr3	ENSMUSG00000018900	ProperStrand	9	chr1	162967513	162967571	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	4	-19.7479
chr11	98855606	98855656	protein_coding	Top2a	exon	ENSMUSG00000020914	ProperStrand	324	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-3.6694
chr17	80845055	80845122	protein_coding	Sos1	intron	ENSMUSG00000024241	ProperStrand	10	chr2	26493386	26493486	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-11.8381
chr19	7453103	7453163	protein_coding	AI846148	intron	ENSMUSG00000024970	ProperStrand	17	chr9	40098841	40098877	protein_coding	Scn3b	utr3	ENSMUSG00000049281	NonProperStrand	2	2	-inf
chr17	85148356	85148390	protein_coding	Lrpprc	exon	ENSMUSG00000024120	ProperStrand	98	chr7	107855349	107855366	protein_coding	Fam168a	utr5	ENSMUSG00000029461	NonProperStrand	3	1	-18.7333
chrX	17740226	17740244	protein_coding	Kdm6a	exon	ENSMUSG00000037369	ProperStrand	19	chr13	47165354	47165414	protein_coding	Kdm1b	intron	ENSMUSG00000038080	ProperStrand	7	1	-inf
chr17	35374079	35374095	protein_coding	Atp6v1g2	utr5	ENSMUSG00000024403	ProperStrand	7	chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	1	-16.0904
chr2	90235294	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	72893112	72893212	protein_coding	1200014J11Rik	utr3	ENSMUSG00000020783	ProperStrand	11	1	-7.8469
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr13	55589253	55589269	protein_coding	Dbn1	exon	ENSMUSG00000034675	ProperStrand	43	1	-9.3854
chr15	84101747	84143702	protein_coding	Parvb	utr3	ENSMUSG00000022438	ProperStrand	127	chr4	131908236	131908298	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	5	-4.1759
chr1	39426957	39427837	protein_coding	Rpl31	exon	ENSMUSG00000073702	ProperStrand	41	chr7	116664807	116664897	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.2237
chr16	62909890	62909934	protein_coding	Pros1	exon	ENSMUSG00000022912	ProperStrand	20	chr1	37547230	37552725	protein_coding	Mgat4a	exon	ENSMUSG00000026110	ProperStrand	16	1	-18.0974
chr16	23111371	23111388	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr12	112213838	112213959	protein_coding	Ankrd9	utr3	ENSMUSG00000037904	ProperStrand	46	6	-19.8495
chr15	98604924	98606960	protein_coding	Wnt10b	exon	ENSMUSG00000022996	NonProperStrand	189	chr6	125071316	125071351	protein_coding	Chd4	exon	ENSMUSG00000063870	ProperStrand	303	1	-7.7749
chr2	90235295	90235330	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	10297988	10298898	protein_coding	Gm98	exon	ENSMUSG00000036098	ProperStrand	26	1	-6.0972
chr1	138382212	138382230	protein_coding	Kif14	intron	ENSMUSG00000041498	NonProperStrand	36	chr4	131908236	131908339	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-3.9799
chr11	116535501	116535533	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr1	95770204	95770221	protein_coding	Gal3st2	exon	ENSMUSG00000034005	NonProperStrand	3	1	-12.2431
chr4	3761646	3762746	protein_coding	Rps20	utr5	ENSMUSG00000028234	ProperStrand	71	chr18	35716762	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-3.4564
chr9	41787433	41787523	protein_coding	Sorl1	exon	ENSMUSG00000049313	ProperStrand	112	chr10	90581055	90581135	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-3.6276
chr19	38869531	38869547	protein_coding	Noc3l	exon	ENSMUSG00000024999	NonProperStrand	149	chr7	138048167	138048210	protein_coding	Plekha1	intron	ENSMUSG00000040268	ProperStrand	15	1	-14.3116
chr17	32278351	32278441	protein_coding	Notch3	exon	ENSMUSG00000038146	ProperStrand	181	chr4	131908700	131908799	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	7	-4.0428
chr5	133058259	133058339	LINE	L1_Mus1	L1	chr5L1_Mus1133057684	ProperStrand	1	chr5	136915096	136915186	protein_coding	Cux1	intron	ENSMUSG00000029705	NonProperStrand	5	1	-inf
chr10	60915234	60915300	protein_coding	Eif4ebp2	utr5	ENSMUSG00000020091	ProperStrand	39	chr18	82654638	82654656	protein_coding	Mbp	intron	ENSMUSG00000041607	ProperStrand	11	1	-17.4666
chr11	97023212	97023276	protein_coding	Kpnb1	utr3	ENSMUSG00000001440	ProperStrand	197	chr4	86232397	86232487	snoRNA	ENSMUSG00000088958_Scarna8	.	ENSMUSG00000088958	ProperStrand	366	1	-7.3184
chr2	121282863	121282879	protein_coding	2310003F16Rik	exon	ENSMUSG00000027245	ProperStrand	40	chr19	8799582	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-7.5752
chr4	137813143	137813162	protein_coding	Sh2d5	exon	ENSMUSG00000045349	NonProperStrand	31	chr8	26879777	26879793	protein_coding	Gm17484	utr3	ENSMUSG00000091514	ProperStrand	68	1	-14.3873
chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr9	57385425	57385441	protein_coding	2310046O06Rik	utr5	ENSMUSG00000032305	ProperStrand	135	1	-4.8706
chr8	49386307	49396020	protein_coding	Odz3	exon	ENSMUSG00000031561	ProperStrand	56	chr11	62416985	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-6.1792
chr19	58601574	58601664	protein_coding	1700011F14Rik	intron	ENSMUSG00000025090	NonProperStrand	1	chr10	43154549	43154639	protein_coding	Pdss2	intron	ENSMUSG00000038240	ProperStrand	6	1	-inf
chr9	120037953	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	chr16	23109051	23109091	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	12	-11.3967
chr5	96500178	96500194	protein_coding	Cnot6l	utr3	ENSMUSG00000034724	NonProperStrand	15	chr4	131908285	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-9.5441
chr4	53873612	53873646	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	chr7	148634769	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	6	-6.1381
chr3	137529035	137529370	protein_coding	H2afz	exon	ENSMUSG00000037894	ProperStrand	72	chr18	33954817	33954934	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	3	-8.0245
chr10	76228956	76228988	protein_coding	Pcbp3	intron	ENSMUSG00000001120	ProperStrand	12	chr11	6428034	6428088	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-10.3430
chr19	46143562	46145835	protein_coding	Pprc1	exon	ENSMUSG00000055491	ProperStrand	143	chr7	116663649	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-2.2653
chrX	34667269	34667285	protein_coding	Nkap	exon	ENSMUSG00000016409	NonProperStrand	133	chr15	79908958	79909019	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-3.9477
chr11	69462346	69462429	protein_coding	Fxr2	exon	ENSMUSG00000018765	ProperStrand	40	chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	1	-9.6061
chr17	71740698	71740723	protein_coding	Smchd1	exon	ENSMUSG00000024054	ProperStrand	79	chr4	131865856	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.3598
chr7	73209006	73209106	protein_coding	Snrpa1	intron	ENSMUSG00000030512	ProperStrand	71	chr9	64022860	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-7.6893
chr12	99756958	99756975	protein_coding	Kcnk10	exon	ENSMUSG00000033854	NonProperStrand	37	chr15	79913287	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.5050
chr11	35637986	35639565	protein_coding	Rars	exon	ENSMUSG00000018848	ProperStrand	18	chr17	35087894	35087937	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-7.5975
chr6	48368750	48368768	protein_coding	Krba1	utr3	ENSMUSG00000042810	NonProperStrand	2	chr17	24857783	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-9.4368
chr2	34718988	34719004	protein_coding	Psmd5	exon	ENSMUSG00000026869	ProperStrand	9	chr9	50816824	50816841	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	1	-15.7072
chr10	58901362	58901379	protein_coding	Oit3	exon	ENSMUSG00000009654	NonProperStrand	11	chr15	81951310	81951329	protein_coding	Mei1	intron	ENSMUSG00000068117	NonProperStrand	3	1	-22.5261
chr5	29114774	29114864	lincRNA	9530036O11Rik	intron	ENSMUSG00000086663	ProperStrand	8	chr10	75834756	75834846	protein_coding	Pcnt	intron	ENSMUSG00000001151	NonProperStrand	10	1	-19.4909
chr9	82395722	82395739	LINE	Lx4B	L1	chr9Lx4B82394755	ProperStrand	12	chr10	60887963	60888014	protein_coding	Nodal	utr3	ENSMUSG00000037171	ProperStrand	30	1	-18.1170
chr11	48616671	48616706	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	chr14	76247753	76247835	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-0.9268
chr3	152868546	152869672	protein_coding	St6galnac3	exon	ENSMUSG00000052544	ProperStrand	19	chr4	131908236	131908290	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.3472
chr19	37683495	37683524	protein_coding	Exoc6	exon	ENSMUSG00000053799	ProperStrand	9	chr19	8799360	8799407	snoRNA	ENSMUSG00000065280_SNORD28	.	ENSMUSG00000065280	ProperStrand	269	1	-14.1923
chr17	46285129	46285145	protein_coding	Mad2l1bp	exon	ENSMUSG00000034509	NonProperStrand	67	chr5	147646584	147646614	protein_coding	Rpl21	exon	ENSMUSG00000041453	ProperStrand	112	1	-11.8383
chr9	78023109	78023180	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr16	93857252	93857334	protein_coding	Morc3	intron	ENSMUSG00000039456	ProperStrand	24	1	-7.7053
chr6	83111671	83111687	protein_coding	1700003E16Rik	exon	ENSMUSG00000030030	ProperStrand	352	chr2	158451026	158451043	protein_coding	Actr5	exon	ENSMUSG00000037761	NonProperStrand	94	1	-8.8687
chr14	51427116	51427216	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr9	64024506	64024567	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	1	-2.5246
chr2	90235314	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	75359822	75360194	protein_coding	Smarcb1	exon	ENSMUSG00000000902	ProperStrand	109	1	-3.3473
chr13	96102560	96102586	protein_coding	Zbed3	intron	ENSMUSG00000041995	ProperStrand	33	chr7	116663637	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.5837
chr5	74425344	74425361	protein_coding	Usp46	exon	ENSMUSG00000054814	ProperStrand	2	chr15	98350148	98350238	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-12.1511
chr6	134780323	134780339	protein_coding	Crebl2	utr5	ENSMUSG00000032652	ProperStrand	41	chr5	151755616	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	2	-13.5413
chr18	32526242	32526259	lincRNA	A830052D11Rik	intron	ENSMUSG00000085670	NonProperStrand	3	chr15	79913295	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-9.8112
chr8	87369793	87369883	protein_coding	Calr	exon	ENSMUSG00000003814	ProperStrand	232	chr2	32818803	32818885	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-2.9322
chr9	56955292	56955382	protein_coding	Sin3a	exon	ENSMUSG00000042557	ProperStrand	108	chr4	131866161	131866241	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-2.6101
chr18	66340804	66340820	protein_coding	Ccbe1	intron	ENSMUSG00000046318	NonProperStrand	11	chr8	97428605	97428628	protein_coding	Ccdc102a	intron	ENSMUSG00000063605	ProperStrand	11	1	-19.3304
chr17	88072002	88072059	protein_coding	Msh2	exon	ENSMUSG00000024151	ProperStrand	124	chr4	95564317	95564334	protein_coding	Fggy	intron	ENSMUSG00000028573	NonProperStrand	15	1	-14.6898
chr9	85597348	85600073	protein_coding	Ibtk	exon	ENSMUSG00000035941	ProperStrand	14	chr4	131908687	131908771	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.6665
chr5	135597632	135597649	protein_coding	Mlxipl	exon	ENSMUSG00000005373	ProperStrand	12	chr1	180558407	180558424	protein_coding	Kif26b	intron	ENSMUSG00000026494	NonProperStrand	14	1	-inf
chr1	10085989	10086069	protein_coding	Cspp1	exon	ENSMUSG00000056763	ProperStrand	37	chr19	8798744	8798812	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-5.7443
chr9	96219900	96219920	protein_coding	Tfdp2	utr3	ENSMUSG00000032411	ProperStrand	95	chr19	8800413	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-2.7052
chr8	97111909	97111995	protein_coding	Fam192a	exon	ENSMUSG00000031774	ProperStrand	11	chr10	23505152	23505175	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-7.0732
chr10	16844327	16844346	LINE	L1_Mur1	L1	chr10L1_Mur116843303	ProperStrand	76	chr11	6428089	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.7712
chr8	91102970	91102989	protein_coding	Nkd1	intron	ENSMUSG00000031661	NonProperStrand	6	chr16	57391631	57391731	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	1	-15.0491
chr4	148494139	148494157	protein_coding	Dffa	utr3	ENSMUSG00000028974	ProperStrand	55	chr4	131908351	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-2.8952
chr10	9571816	9571906	snoRNA	ENSMUSG00000064609_SNORA36	.	ENSMUSG00000064609	ProperStrand	35	chr2	26493404	26493484	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-4.7678
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr10	23505152	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-0.7475
chr15	7143713	7143763	protein_coding	Lifr	utr3	ENSMUSG00000054263	ProperStrand	64	chr11	62416996	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-5.9161
chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr15	98350146	98350255	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	10	-5.3434
chr9	39358287	39358304	protein_coding	Olfr958	exon	ENSMUSG00000050853	NonProperStrand	266	chr18	35714144	35714203	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-1.0485
chr4	116314521	116314566	protein_coding	Akr1a1	exon	ENSMUSG00000028692	ProperStrand	35	chr8	129468766	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	2	-8.9595
chr8	39436369	39436386	protein_coding	Sgcz	intron	ENSMUSG00000039539	ProperStrand	46	chr2	26494777	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.5925
chr2	142894089	142896624	protein_coding	Snrpb2	exon	ENSMUSG00000008333	ProperStrand	11	chr16	23110968	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.6241
chr13	99410496	99410586	DNA	RCHARR1	MER1_type	chr13RCHARR199410395	NonProperStrand	1	chr13	99410253	99410343	LTR	MTEa	MaLR	chr13MTEa99410038	NonProperStrand	1	1	-inf
chr16	33625246	33646649	protein_coding	Slc12a8	exon	ENSMUSG00000035506	ProperStrand	52	chr5	108336393	108336495	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	3	-12.1277
chr8	112387973	112387989	antisense	Gm17344	.	ENSMUSG00000078143	NonProperStrand	100	chr4	155366536	155366553	protein_coding	B3galt6	exon	ENSMUSG00000050796	ProperStrand	40	1	-13.1082
chr6	11912666	11912683	protein_coding	Phf14	exon	ENSMUSG00000029629	NonProperStrand	6	chr1	43590523	43590539	protein_coding	Nck2	exon	ENSMUSG00000066877	ProperStrand	21	1	-18.5896
chr19	17232184	17232200	protein_coding	Prune2	intron	ENSMUSG00000039126	NonProperStrand	6	chr16	23110833	23110882	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.7876
chr8	108227799	108227888	protein_coding	E130303B06Rik	exon	ENSMUSG00000013155	ProperStrand	3	chr17	24665467	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-11.2419
chr2	90235307	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr13	119500325	119500342	antisense	Gm16263	.	ENSMUSG00000086709	ProperStrand	20	2	-10.7530
chr8	96588792	96588882	protein_coding	Ogfod1	utr3	ENSMUSG00000033009	ProperStrand	18	chr9	15119646	15119726	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.8766
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr9	62992379	62992395	protein_coding	Skor1	exon	ENSMUSG00000022245	NonProperStrand	70	1	-5.6013
chr5	145654097	145654155	protein_coding	Smurf1	exon	ENSMUSG00000038780	ProperStrand	45	chr4	131908689	131908712	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.6382
chr9	64023953	64024006	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	chr18	35102297	35102319	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	3	-6.0463
chr15	5139658	5139748	protein_coding	Ttc33	exon	ENSMUSG00000022151	ProperStrand	2	chr15	98350192	98350272	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-12.1511
chr16	18877196	18877244	protein_coding	Hira	utr5	ENSMUSG00000022702	ProperStrand	28	chr2	26768393	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-7.1139
chr2	147009105	147009122	protein_coding	Nkx2-2	utr3	ENSMUSG00000027434	NonProperStrand	84	chr11	97642952	97643017	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.9168
chr4	148734676	148735434	protein_coding	Ube4b	exon	ENSMUSG00000028960	ProperStrand	66	chr7	117190017	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-5.4341
chr2	164597443	164597475	protein_coding	Ube2c	exon	ENSMUSG00000001403	ProperStrand	40	chr11	106362339	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-6.6445
chr15	79941206	79941306	protein_coding	Syngr1	intron	ENSMUSG00000022415	ProperStrand	51	chr18	35716825	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	7	-17.2766
chr14	45949538	45949554	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	2	-5.5156
chr19	5684345	5684426	protein_coding	Pcnxl3	exon	ENSMUSG00000054874	ProperStrand	96	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-8.0393
chr9	50816824	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	chr17	36000485	36000501	protein_coding	Nrm	exon	ENSMUSG00000059791	ProperStrand	253	1	-8.9255
chrX	84483699	84483749	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr7	109830472	109830488	protein_coding	Trim68	intron	ENSMUSG00000073968	ProperStrand	23	1	-10.1848
chr14	57919826	57919844	protein_coding	Cryl1	intron	ENSMUSG00000021947	ProperStrand	9	chr18	35716761	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	NonProperStrand	45	2	-19.7937
chr8	12757418	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr4	33335213	33335324	protein_coding	Pnrc1	exon	ENSMUSG00000040128	ProperStrand	27	1	-10.2038
mmu-miR-3968	3	20	miRNA	mmu-miR-3968	.	mmu-miR-3968	ProperStrand	27	chr4	131908357	131908457	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	1	-8.8633
chr4	118108656	118108763	protein_coding	Cdc20	exon	ENSMUSG00000006398	ProperStrand	43	chr2	26768404	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-6.2579
chr13	97421956	97422066	protein_coding	Hmgcr	exon	ENSMUSG00000021670	ProperStrand	56	chr15	79913288	79913331	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-3.7202
chr17	29175510	29175600	protein_coding-noncoding	Srsf3	utr5	ENSMUSG00000071172	ProperStrand	30	chr17	29175440	29175520	protein_coding	Srsf3	exon	ENSMUSG00000071172	ProperStrand	23	1	-16.6246
chr8	107046590	107047096	protein_coding	Nae1	exon	ENSMUSG00000031878	ProperStrand	13	chr2	91436271	91436336	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-10.6017
chr4	150271285	150271337	protein_coding	Park7	utr3	ENSMUSG00000028964	ProperStrand	9	chr4	131908809	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.5343
chr12	94801869	94801959	LINE	L1Md_T	L1	chr12L1Md_T94797637	ProperStrand	1	chr7	54443458	54443538	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-inf
chr2	132619817	132620489	protein_coding	Chgb	exon	ENSMUSG00000027350	ProperStrand	3	chr7	116663712	116663728	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-8.5982
chr7	3161292	3161392	protein_coding	AU018091	exon	ENSMUSG00000054753	ProperStrand	42	chr3	4339074	4339118	rRNA	n-R5s194	.	ENSMUSG00000077912	ProperStrand	24	1	-15.8992
chr11	79248412	79250221	protein_coding	Nf1	exon	ENSMUSG00000020716	ProperStrand	42	chr12	111930862	111930962	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	4	-inf
chr7	67639653	67639732	LINE	Lx4A	L1	chr7Lx4A67639670	NonProperStrand	1	chr7	67639454	67639544	LINE	Lx8	L1	chr7Lx867638710	NonProperStrand	1	1	-inf
chr6	76884072	76884089	protein_coding	Ctnna2	intron	ENSMUSG00000063063	ProperStrand	14	chr11	106362304	106362341	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-8.7702
chr2	69674511	69674527	protein_coding	Klhl23	utr3	ENSMUSG00000042155	ProperStrand	1	chr9	15119630	15119712	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-inf
chr1	187196802	187196902	protein_coding	Eprs	exon	ENSMUSG00000026615	ProperStrand	149	chr2	26494708	26494763	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	10	-19.7274
chr7	26409194	26409819	protein_coding	Atp5sl	exon	ENSMUSG00000057229	ProperStrand	9	chr1	162965540	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-7.0004
chr5	24198709	24198777	protein_coding	Nub1	exon	ENSMUSG00000028954	ProperStrand	32	chr2	157958285	157959995	protein_coding	Tgm2	exon	ENSMUSG00000037820	ProperStrand	44	1	-15.2158
chr6	141437508	141438631	protein_coding	Pde3a	exon	ENSMUSG00000041741	NonProperStrand	2	chr18	35716830	35716878	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-9.2832
chr16	13947693	13947718	protein_coding	Mpv17l	utr3	ENSMUSG00000022679	ProperStrand	3	chr4	131908804	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-12.0505
chr17	35282150	35282308	protein_coding	Bag6	exon	ENSMUSG00000024392	ProperStrand	181	chr12	80171001	80171818	protein_coding	Plekhh1	exon	ENSMUSG00000060716	ProperStrand	24	1	-12.9548
chr8	13416896	13416912	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr11	33056012	33056696	protein_coding	Npm1	exon	ENSMUSG00000057113	ProperStrand	352	1	-3.0855
chr12	70970609	70970625	protein_coding	Map4k5	intron	ENSMUSG00000034761	NonProperStrand	5	chr19	8963027	8963054	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-7.1260
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr4	41150098	41150158	snoRNA	ENSMUSG00000089265_SNORD121A	.	ENSMUSG00000089265	ProperStrand	370	2	-4.4059
chr14	63761419	63761503	protein_coding	Ctsb	utr3	ENSMUSG00000021939	ProperStrand	48	chr8	98331290	98331307	protein_coding	Cnot1	utr5	ENSMUSG00000036550	ProperStrand	315	1	-10.4395
chr8	13416896	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr9	64143736	64143876	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	3	-4.2324
chr4	124615845	124615862	lincRNA	9930104L06Rik	exon	ENSMUSG00000044730	ProperStrand	15	chr8	129468831	129468867	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-7.1564
chr11	51551381	52013874	lincRNA	Gm16953	intron	ENSMUSG00000087101	ProperStrand	20	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	4	-16.7667
chr14	71295884	71301302	protein_coding	Gfra2	exon	ENSMUSG00000022103	ProperStrand	26	chr19	8963044	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.7706
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr12	21402156	21402187	protein_coding	Ywhaq	exon	ENSMUSG00000076432	ProperStrand	70	1	-6.7216
chr2	91613185	91613203	protein_coding	Ambra1	exon	ENSMUSG00000040506	ProperStrand	65	chr2	155904070	155904087	protein_coding	Cpne1	exon	ENSMUSG00000074643	NonProperStrand	1	1	-inf
chr4	147315840	147315930	protein_coding	2510039O18Rik	exon	ENSMUSG00000044496	ProperStrand	28	chr8	98269972	98270052	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-7.0528
chr18	56912947	56912994	protein_coding	Lmnb1	utr3	ENSMUSG00000024590	ProperStrand	176	chr17	65825991	65826007	protein_coding	Tmem232	exon	ENSMUSG00000045036	ProperStrand	8	4	-19.2110
chrX	103395038	103398941	protein_coding	Pgk1	exon	ENSMUSG00000062070	ProperStrand	484	chr7	118219574	118219661	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	4	-3.9496
chr19	5719336	5719352	protein_coding	Ehbp1l1	exon	ENSMUSG00000024937	ProperStrand	75	chr17	13184997	13185014	protein_coding	Wtap	utr5	ENSMUSG00000060475	ProperStrand	119	1	-11.4895
chr11	88154994	88155013	protein_coding	Msi2	utr3	ENSMUSG00000069769	NonProperStrand	12	chr4	131865855	131865933	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.6729
chr7	51503405	51505878	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	chr19	8798740	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	2	-1.7744
chr7	75334474	75334564	protein_coding	Igf1r	exon	ENSMUSG00000005533	ProperStrand	121	chr10	110918555	110918635	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-2.2193
chr4	85016349	85016365	protein_coding	Sh3gl2	intron	ENSMUSG00000028488	NonProperStrand	313	chr17	46794745	46794888	protein_coding	Cul7	exon	ENSMUSG00000038545	ProperStrand	38	1	-10.9243
chr4	137077366	137077719	protein_coding	Hspg2	exon	ENSMUSG00000028763	NonProperStrand	18	chr19	8800415	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	NonProperStrand	18	1	-17.8260
chr5	100855903	100855926	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr4	106054840	106054874	protein_coding	Usp24	exon	ENSMUSG00000028514	ProperStrand	74	1	-6.2233
chr14	14783735	14785621	protein_coding	Thoc7	exon	ENSMUSG00000053453	ProperStrand	22	chr18	33954828	33954918	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	6	-20.0542
chr2	29997842	29997935	protein_coding	Tbc1d13	exon	ENSMUSG00000039678	ProperStrand	24	chr18	51449511	51449527	protein_coding	Prr16	intron	ENSMUSG00000073565	ProperStrand	16	1	-17.7988
chr12	110887828	110887894	snoRNA	ENSMUSG00000084549_SNORD113	.	ENSMUSG00000084549	ProperStrand	196	chr5	130300420	130300550	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	5	-5.3226
chr9	30235085	30235102	protein_coding	Snx19	exon	ENSMUSG00000031993	ProperStrand	353	chr13	48976443	48980684	protein_coding	Fam120a	exon	ENSMUSG00000038014	ProperStrand	76	1	-9.2886
chr5	23345618	23347531	protein_coding	Tomm7	utr3	ENSMUSG00000028998	ProperStrand	6	chr16	23110966	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.7876
chr8	111766705	111766785	lincRNA	D030068K23Rik	intron	ENSMUSG00000085859	ProperStrand	21	chr17	56151908	56154446	protein_coding	Mpnd	exon	ENSMUSG00000003199	ProperStrand	71	16	-21.1133
chr2	74523573	74523589	protein_coding	Hoxd11	utr3	ENSMUSG00000042499	ProperStrand	5	chr2	30192474	30192493	protein_coding	Nup188	exon	ENSMUSG00000052533	ProperStrand	96	1	-17.3644
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr17	25996060	25996076	protein_coding	Wdr90	exon	ENSMUSG00000073434	ProperStrand	91	1	-7.7610
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr2	118611946	118611962	protein_coding	Disp2	exon	ENSMUSG00000040035	NonProperStrand	204	1	-6.1647
chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr8	46137112	46137128	protein_coding	Fat1	utr3	ENSMUSG00000070047	NonProperStrand	5	1	-11.5948
chr3	102941214	102944983	protein_coding	Dennd2c	exon	ENSMUSG00000007379	ProperStrand	19	chr7	29136574	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.4734
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr10	83996551	83996594	protein_coding	Ckap4	exon	ENSMUSG00000046841	ProperStrand	60	1	-6.9245
chr3	131233891	131233981	protein_coding	Papss1	intron	ENSMUSG00000028032	ProperStrand	11	chr5	91320626	91320706	protein_coding	Cxcl1	intron	ENSMUSG00000029380	NonProperStrand	1	1	-inf
chr9	78023110	78023180	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr11	69559844	69560213	protein_coding	Polr2a	exon	ENSMUSG00000005198	ProperStrand	200	2	-6.0619
chr4	151603922	151611847	protein_coding	Acot7	exon	ENSMUSG00000028937	ProperStrand	15	chr10	82456766	82456784	protein_coding	Chst11	intron	ENSMUSG00000034612	ProperStrand	170	1	-14.0481
chr1	162968244	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	chr18	35714159	35714259	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	7	-0.8299
chr3	137528521	137529008	protein_coding	H2afz	exon	ENSMUSG00000037894	ProperStrand	72	chr5	74489607	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	3	-8.5831
chr7	140955176	140955198	protein_coding	Dhx32	intron	ENSMUSG00000030986	ProperStrand	100	chr10	23505172	23505233	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-1.3251
chr17	4082171	4082212	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr6	113284585	113284601	protein_coding	Camk1	exon	ENSMUSG00000030272	ProperStrand	13	1	-13.0828
chr6	34826566	34826666	protein_coding	3110062M04Rik	exon	ENSMUSG00000046806	ProperStrand	7	chr4	131908685	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	7	-inf
chr5	74489268	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr6	119898342	119898432	protein_coding	Wnk1	exon	ENSMUSG00000045962	ProperStrand	221	1	-3.1571
chr9	123581934	123581961	protein_coding	Slc6a20a	intron	ENSMUSG00000036814	ProperStrand	1	chr11	77995188	77995242	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-inf
chr7	88488663	88489258	protein_coding	Rps17	exon	ENSMUSG00000061787	ProperStrand	105	chr16	23111775	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.0915
chr11	94202415	94202496	protein_coding	Ankrd40	utr3	ENSMUSG00000020864	ProperStrand	11	chr7	29938464	29938481	protein_coding	Fam98c	exon	ENSMUSG00000030590	ProperStrand	9	3	-20.6583
chr1	126447368	126447385	SINE	MIRb	MIR	chr1MIRb126447188	NonProperStrand	1	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-inf
chr1	181719829	181720484	protein_coding	Ahctf1	exon	ENSMUSG00000026491	ProperStrand	39	chr9	15119632	15119712	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.4004
chr2	26768372	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	NonProperStrand	6	chr16	23111689	23111738	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	NonProperStrand	47	1	-18.6589
chr3	157197294	157197311	protein_coding	Zranb2	utr5	ENSMUSG00000028180	ProperStrand	43	chr19	8798484	8798553	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-5.8641
chr3	121381031	121381047	protein_coding	4930432M17Rik	intron	ENSMUSG00000074248	NonProperStrand	33	chr2	26768049	26768107	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	2	-15.1697
chr17	23953386	23953464	protein_coding	Srrm2	utr3	ENSMUSG00000039218	ProperStrand	521	chr15	48382885	48382913	snRNA	ENSMUSG00000065742_U2	.	ENSMUSG00000065742	ProperStrand	3	2	-inf
chr18	36534948	36556328	protein_coding	0610010O12Rik	intron	ENSMUSG00000046727	ProperStrand	4	chr3	68889026	68889116	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	2	-14.4181
chr9	95525006	95525036	antisense	Gm16126	.	ENSMUSG00000086585	NonProperStrand	229	chr11	6428035	6428169	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	4	-4.8136
chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-6.1213
chr2	167311014	167311034	protein_coding	Spata2	utr5	ENSMUSG00000047030	ProperStrand	9	chr2	91436261	91436335	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-11.3732
chr5	134822282	134822301	LTR	RLTR10B2	ERVK	chr5RLTR10B2134821956	ProperStrand	1	chr17	35972715	35972772	protein_coding	Tubb5	exon	ENSMUSG00000001525	ProperStrand	624	1	-inf
chr12	80064600	80064690	protein_coding	Tmem229b	utr3	ENSMUSG00000046157	ProperStrand	1	chr7	29136525	29136605	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-inf
chr1	189169396	189169444	protein_coding	Gpatch2	intron	ENSMUSG00000039210	ProperStrand	11	chr4	131865937	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-11.8308
chr7	144659618	144659670	protein_coding	Glrx3	utr3	ENSMUSG00000031068	ProperStrand	35	chr9	64143747	64143784	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	3	-19.7636
chr4	46515330	46515421	protein_coding	Nans	exon	ENSMUSG00000028334	ProperStrand	18	chr18	35716843	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	7	-inf
chr3	121743058	121743077	SINE	ID_B1	B4	chr3ID_B1121742959	ProperStrand	1	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-inf
chr5	123622050	123622066	protein_coding	Hpd	exon	ENSMUSG00000029445	ProperStrand	254	chr9	118466617	118466733	protein_coding	Golga4	exon	ENSMUSG00000038708	ProperStrand	95	1	-9.4981
chr1	55044070	55044122	protein_coding	Sf3b1	utr3	ENSMUSG00000025982	ProperStrand	158	chr19	31157628	31157644	protein_coding	Cstf2t	exon	ENSMUSG00000053536	ProperStrand	48	1	-11.8198
chr2	25105521	25107254	protein_coding	Ndor1	exon	ENSMUSG00000006471	NonProperStrand	84	chr9	15118322	15118373	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-4.9666
chr10	80641920	80641974	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr1	33828651	33828669	protein_coding	Zfp451	intron	ENSMUSG00000042197	NonProperStrand	393	1	-2.5758
chr6	113268714	113269120	protein_coding	Brpf1	exon	ENSMUSG00000001632	ProperStrand	23	chr4	131908267	131908347	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.9964
chr8	111766705	111766785	lincRNA	D030068K23Rik	intron	ENSMUSG00000085859	ProperStrand	21	chr17	28552901	28565299	protein_coding	Fkbp5	exon	ENSMUSG00000024222	ProperStrand	44	1	-16.0772
chr10	121242090	121244926	protein_coding	Srgap1	exon	ENSMUSG00000020121	NonProperStrand	80	chr7	116663633	116663690	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.0324
chr19	8799587	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	chr12	60235055	60235155	snoRNA	ENSMUSG00000077505_SNORA26	.	ENSMUSG00000077505	ProperStrand	82	1	-6.1493
chr10	59757473	59757723	protein_coding	Psap	exon	ENSMUSG00000004207	ProperStrand	124	chr17	35088980	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-4.4619
chr15	58438879	58438969	protein_coding	Fer1l6	intron	ENSMUSG00000037106	NonProperStrand	5	chr1	79603795	79603875	protein_coding	Ap1s3	utr3	ENSMUSG00000054702	NonProperStrand	11	1	-19.0787
chr7	29101154	29105062	protein_coding	Supt5h	exon	ENSMUSG00000003435	ProperStrand	123	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	5	-11.0135
chr8	87574288	87574355	protein_coding	Tnpo2	exon	ENSMUSG00000031691	ProperStrand	92	chr4	41150098	41150155	snoRNA	ENSMUSG00000089265_SNORD121A	.	ENSMUSG00000089265	ProperStrand	370	1	-8.8124
chr1	157915647	157915694	protein_coding	Tor1aip2	utr3	ENSMUSG00000050565	ProperStrand	31	chr17	24665444	24665500	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	3	-14.3626
chr6	28370410	28370490	protein_coding	Gcc1	exon	ENSMUSG00000029708	ProperStrand	5	chr7	150717298	150717388	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-10.6258
chr19	44379441	44379465	protein_coding	Scd2	utr3	ENSMUSG00000025203	ProperStrand	219	chr6	115758042	115758120	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-3.0356
chrX	46062072	46062162	protein_coding	Rbmx2	exon	ENSMUSG00000031107	ProperStrand	7	chr8	73419706	73419786	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-12.0588
chr19	32899636	32899652	protein_coding	Pten	utr3	ENSMUSG00000013663	NonProperStrand	1	chr1	89673606	89673696	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-inf
chr10	127152705	127152721	protein_coding	Myo1a	exon	ENSMUSG00000025401	ProperStrand	93	chr2	166395935	166395952	protein_coding	Prex1	exon	ENSMUSG00000039621	ProperStrand	20	1	-14.6485
chr4	125825790	125825873	protein_coding	Fam176b	utr5	ENSMUSG00000050212	ProperStrand	6	chr11	116533865	116533893	snoRNA	ENSMUSG00000065640_Snord1c	.	ENSMUSG00000065640	ProperStrand	373	4	-19.2110
chr4	11089834	11089899	protein_coding	Trp53inp1	intron	ENSMUSG00000028211	ProperStrand	35	chr19	8799835	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	2	-9.7818
chr10	85416222	85418536	protein_coding	D10Wsu52e	exon	ENSMUSG00000001783	ProperStrand	45	chr1	180260790	180260867	protein_coding	Hnrnpu	exon	ENSMUSG00000039630	ProperStrand	286	1	-10.7630
chr17	23955822	23955839	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	chr12	17552953	17553043	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-3.3608
chr16	23107544	23107560	protein_coding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	356	chr8	24268719	24268735	protein_coding	Nkx6-3	utr3	ENSMUSG00000063672	ProperStrand	2	1	-17.3515
chr10	7421564	7421621	protein_coding	Lats1	exon	ENSMUSG00000040021	ProperStrand	13	chr1	88247743	88247797	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	3	-18.3586
chr1	133457399	133457489	LTR	MTB	MaLR	chr1MTB133457297	ProperStrand	1	chr1	133457561	133457641	LTR	MTB	MaLR	chr1MTB133457523	NonProperStrand	1	1	-inf
chr2	90235296	90235341	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr18	13151114	13151191	protein_coding	Impact	utr3	ENSMUSG00000024423	ProperStrand	32	3	-13.2456
chr11	75132015	75132105	protein_coding	Rpa1	intron	ENSMUSG00000000751	ProperStrand	37	chr4	131908689	131908718	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-3.5476
chr6	54841350	54841375	protein_coding	Znrf2	utr3	ENSMUSG00000058446	ProperStrand	13	chr10	90581049	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	2	-12.6609
chr7	87225936	87225956	protein_coding	Zfp710	utr5	ENSMUSG00000048897	ProperStrand	229	chr15	76443930	76444032	protein_coding	Slc39a4	exon	ENSMUSG00000063354	ProperStrand	35	1	-11.7158
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	2	-2.2836
chr11	53213226	53213284	protein_coding	Aff4	exon	ENSMUSG00000049470	ProperStrand	94	chr2	26494708	26494800	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.3254
chr4	131908356	131908466	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr12	52472725	52473441	protein_coding	G2e3	exon	ENSMUSG00000035293	ProperStrand	53	1	-7.5068
chr3	96025814	96025830	protein_coding	Hist2h2be	utr3	ENSMUSG00000068854	ProperStrand	3	chr17	24857718	24857764	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-8.3442
chr1	74720045	74720145	protein_coding	Ttll4	intron	ENSMUSG00000033257	ProperStrand	24	chr4	131865910	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-5.7521
chr4	32728201	32728241	protein_coding	Casp8ap2	exon	ENSMUSG00000028282	ProperStrand	7	chr9	15119733	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-6.8089
chr7	129133174	129133192	protein_coding	Gga2	utr3	ENSMUSG00000030872	ProperStrand	65	chr6	124665382	124665482	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	1	-6.7750
chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr9	15119287	15119428	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	21	-1.2878
chr5	122911626	122919797	protein_coding	Atp2a2	exon	ENSMUSG00000029467	ProperStrand	166	chr4	131865856	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	8	-8.2700
chr2	179322378	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr18	57400307	57400324	protein_coding	Megf10	exon	ENSMUSG00000024593	ProperStrand	143	1	-9.4700
chr1	71650165	71650227	protein_coding	Fn1	intron	ENSMUSG00000026193	ProperStrand	931	chr2	23232019	23232036	protein_coding	Nxph2	intron	ENSMUSG00000069132	ProperStrand	1	1	-inf
chr15	41620675	41620692	protein_coding	Oxr1	exon	ENSMUSG00000022307	ProperStrand	21	chr10	90432659	90432678	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	1	-12.7466
chr17	45705240	45705259	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr4	41351784	41356766	protein_coding	Kif24	exon	ENSMUSG00000028438	ProperStrand	7	2	-17.9940
chr5	143734059	143734534	protein_coding	Fscn1	utr3	ENSMUSG00000029581	ProperStrand	200	chr19	8800384	8800479	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	3	-4.3784
chr16	38158181	38158222	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	chr2	144091829	144091951	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	ProperStrand	549	1	-4.3099
chr6	124952740	124952785	protein_coding	C530028O21Rik	utr3	ENSMUSG00000030329	ProperStrand	12	chr7	117189988	117190024	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	3	-15.0812
chr5	74489216	74489325	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr4	101137181	101137218	protein_coding	Ak4	utr3	ENSMUSG00000028527	ProperStrand	20	1	-7.8145
chr2	38012954	38012970	protein_coding	Dennd1a	intron	ENSMUSG00000035392	NonProperStrand	128	chr18	33954873	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-2.1777
chr4	18020485	18020501	protein_coding	Mmp16	exon	ENSMUSG00000028226	ProperStrand	55	chr19	4859760	4859809	protein_coding	Ctsf	exon	ENSMUSG00000083282	ProperStrand	6	1	-17.9678
chr7	149170855	149171339	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	chr2	26493365	26493499	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-3.5236
chr8	96835527	96838527	protein_coding	Nup93	exon	ENSMUSG00000032939	ProperStrand	43	chr11	106362336	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-6.5006
chr17	36018579	36018658	protein_coding	Dhx16	exon	ENSMUSG00000024422	ProperStrand	28	chr10	23505152	23505177	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-4.3109
chr8	73419883	73419912	protein_coding	Rpl18a	exon	ENSMUSG00000045128	ProperStrand	394	chr18	35714186	35714290	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-1.2822
chr4	86394549	86394594	protein_coding	Dennd4c	utr5	ENSMUSG00000038024	ProperStrand	42	chr2	26767762	26767792	snoRNA	ENSMUSG00000064829_SNORD36	.	ENSMUSG00000064829	ProperStrand	98	1	-13.0490
chr7	82755708	82755724	protein_coding	Akap13	exon	ENSMUSG00000066406	ProperStrand	80	chr4	131865866	131865944	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.3420
chrX	158216274	158216291	protein_coding	Rai2	exon	ENSMUSG00000043518	NonProperStrand	8	chr2	130102052	130102103	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-9.4448
chr3	101395387	101395757	protein_coding	Atp1a1	exon	ENSMUSG00000033161	ProperStrand	316	chr1	162966008	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-0.9435
chr6	64033340	64033358	protein_coding	Grid2	intron	ENSMUSG00000071424	ProperStrand	20	chr1	24621339	24621371	protein_coding	Gm10925	utr3	ENSMUSG00000090378	ProperStrand	320	1	-12.1857
chr11	102700049	102700139	protein_coding	Eftud2	utr3	ENSMUSG00000020929	ProperStrand	86	chr19	8963037	8963117	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.6982
chr4	136541512	136541578	protein_coding	Zbtb40	intron	ENSMUSG00000060862	ProperStrand	33	chr10	110918674	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-7.6249
chr7	51505868	51505910	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	chr7	52382752	52382826	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-2.3452
chr1	38110698	38110769	protein_coding	Rev1	exon	ENSMUSG00000026082	ProperStrand	48	chr11	74718931	74718962	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	4	-inf
chr16	8705268	8705358	protein_coding-noncoding	Usp7	utr3	ENSMUSG00000022710	ProperStrand	9	chr5	130300444	130300525	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	8	-inf
chr3	130431681	130431708	protein_coding	Rpl34	exon	ENSMUSG00000062006	ProperStrand	51	chr1	162966816	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	2	-10.6401
chr8	73846848	73846926	protein_coding	Myo9b	exon	ENSMUSG00000004677	ProperStrand	78	chr2	26494708	26494755	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.6435
chr3	16103837	16103917	protein_coding	Ythdf3	exon	ENSMUSG00000047213	ProperStrand	22	chr16	23110869	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.4786
chr1	158258022	158258041	protein_coding	Nphs2	utr3	ENSMUSG00000026602	ProperStrand	3	chr15	5068448	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-12.4037
chr11	97669111	97669129	protein_coding	Lasp1	intron	ENSMUSG00000038366	NonProperStrand	11	chr7	134669211	134669243	protein_coding	Srcap	exon	ENSMUSG00000053877	ProperStrand	69	1	-16.4865
chr2	22444795	22444815	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	chr9	64143736	64143826	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	21	-inf
chr7	28146782	28146798	protein_coding	Spnb4	exon	ENSMUSG00000011751	NonProperStrand	84	chr1	9932550	9932609	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-7.0597
chr16	57391725	57391790	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr9	120038518	120038618	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	NonProperStrand	28	1	-11.8462
chr14	54987853	54988005	protein_coding	Oxa1l	exon	ENSMUSG00000000959	ProperStrand	31	chr4	131866155	131866245	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-4.9234
chr2	37502726	37502742	protein_coding	Strbp	utr5	ENSMUSG00000026915	ProperStrand	90	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-9.9487
chr15	76735400	76736299	protein_coding	Rpl8	exon	ENSMUSG00000003970	ProperStrand	191	chr8	37642430	37642644	protein_coding	Dlc1	exon	ENSMUSG00000031523	ProperStrand	89	1	-10.1984
chr12	81209444	81211383	protein_coding	Zfp36l1	utr3	ENSMUSG00000021127	ProperStrand	12	chr18	35716766	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-12.4231
chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	chr11	55296275	55296316	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-1.5250
chr7	133938798	133940971	protein_coding	Aldoa	utr3	ENSMUSG00000030695	ProperStrand	721	chr11	62416586	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-1.8808
chr2	32766893	32767951	protein_coding	Fam129b	exon	ENSMUSG00000026796	ProperStrand	22	chr7	29136560	29136650	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.1896
chr4	131908231	131908262	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr11	120673222	120673403	protein_coding	Fasn	exon	ENSMUSG00000025153	ProperStrand	298	1	-4.1407
chr3	155715360	155715382	LINE	Lx4A	L1	chr3Lx4A155714407	NonProperStrand	9	chr11	77995189	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-10.0406
chr2	164651930	164652019	protein_coding	Zswim1	utr3	ENSMUSG00000017764	ProperStrand	68	chr1	162967521	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-3.2459
chr2	127416844	127416901	protein_coding	Mrps5	intron	ENSMUSG00000027374	ProperStrand	84	chr5	65779673	65779842	protein_coding	Rpl9	utr3	ENSMUSG00000047215	ProperStrand	113	3	-inf
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr2	181316563	181316579	protein_coding	Uckl1	exon	ENSMUSG00000089917	ProperStrand	142	1	-7.2089
chr4	154099372	154099472	LTR	RMER19B	ERVK	chr4RMER19B154099050	ProperStrand	1	chr5	111121066	111121084	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-inf
chr10	80253576	80253647	protein_coding	Dot1l	exon	ENSMUSG00000061589	ProperStrand	48	chr12	92811924	92812014	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	1	-9.0191
chr7	71344147	71344237	protein_coding	Trpm1	utr5	ENSMUSG00000030523	ProperStrand	9	chr10	23505237	23505278	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.5477
chr8	13081968	13081987	protein_coding	Pcid2	intron	ENSMUSG00000038542	ProperStrand	13	chr16	23110530	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.3353
chr12	110796494	110809604	lincRNA	Meg3	exon	ENSMUSG00000021268	ProperStrand	61	chr12	106005332	106005348	protein_coding	Clmn	utr3	ENSMUSG00000021097	NonProperStrand	30	1	-14.6846
chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	chr2	91436228	91436306	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-4.7244
chr15	103074203	103074441	protein_coding	Hnrnpa1	exon	ENSMUSG00000046434	ProperStrand	68	chr16	23110527	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.2508
chr6	124781856	124781921	protein_coding-noncoding	Cdca3	utr5	ENSMUSG00000023505	ProperStrand	4	chr4	131908810	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-6.2660
chr8	83505750	83505766	protein_coding	Usp38	exon	ENSMUSG00000038250	ProperStrand	26	chr9	78215862	78215893	protein_coding	Dppa5a	exon	ENSMUSG00000060461	ProperStrand	79	1	-14.4560
chr16	87594620	87594638	protein_coding	ORF63	exon	ENSMUSG00000025610	NonProperStrand	23	chr19	8963060	8963160	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.0031
chr14	27452914	27452931	protein_coding	4930570N19Rik	intron	ENSMUSG00000090861	NonProperStrand	2	chr11	69483136	69483206	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-inf
chr2	25563070	25563086	antisense	A230005M16Rik	.	ENSMUSG00000087612	ProperStrand	103	chr9	61762180	61762234	protein_coding	Rplp1	exon	ENSMUSG00000007892	ProperStrand	116	1	-10.9037
chr6	30442659	30444764	protein_coding	Tmem209	exon	ENSMUSG00000029782	ProperStrand	36	chr11	62122558	62122638	protein_coding	Ttc19	exon	ENSMUSG00000042298	ProperStrand	21	1	-16.4841
chr10	127995804	127995887	protein_coding	Pa2g4	utr3	ENSMUSG00000025364	ProperStrand	72	chr3	153575090	153575119	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	2	-12.9655
chr18	42805538	42805554	protein_coding	Ppp2r2b	exon	ENSMUSG00000024500	NonProperStrand	95	chr9	15119630	15119695	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.8678
chr15	12763406	12763454	protein_coding	Drosha	intron	ENSMUSG00000022191	ProperStrand	163	chr19	45438317	45438333	protein_coding	Btrc	utr5	ENSMUSG00000025217	ProperStrand	14	1	-14.2772
chr10	76072919	76072935	protein_coding	Col6a2	exon	ENSMUSG00000020241	ProperStrand	13	chr3	123210921	123210985	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-4.8751
chr7	52378398	52378436	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	chr17	24856622	24856681	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-1.9842
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	ProperStrand	10	chr17	46685488	46685588	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	2	-19.3746
chr11	84701631	84705601	protein_coding	Myo19	exon	ENSMUSG00000020527	ProperStrand	82	chr13	110231347	110231365	protein_coding	Pde4d	intron	ENSMUSG00000021699	ProperStrand	92	1	-11.8268
chr3	82707847	82707863	antisense	4930564K09Rik	.	ENSMUSG00000086273	ProperStrand	48	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-9.0410
chr15	27664982	27665019	protein_coding	Trio	intron	ENSMUSG00000022263	ProperStrand	108	chr19	8799052	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-4.6913
chrX	12869692	12869729	protein_coding	Ddx3x	utr3	ENSMUSG00000000787	ProperStrand	67	chr19	8800380	8800483	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-3.3277
chr13	74494656	74494675	protein_coding	Ccdc127	utr3	ENSMUSG00000021578	NonProperStrand	54	chr16	38158132	38158226	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	1	-8.8616
chr3	31911544	31911566	protein_coding	Kcnmb2	intron	ENSMUSG00000037610	NonProperStrand	4	chr8	73419657	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-8.6136
chr10	75504351	75504464	protein_coding	Zfp280b	utr3	ENSMUSG00000049764	ProperStrand	25	chr5	130300519	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-6.9225
chr17	77410559	77410579	LINE	L1Md_F2	L1	chr17L1Md_F277407335	ProperStrand	1	chr9	15119967	15120017	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-inf
chr14	45949538	45949554	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	chr1	162967516	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-0.8239
chr12	72290476	72290546	protein_coding	2700049A03Rik	exon	ENSMUSG00000034601	ProperStrand	21	chr16	23110829	23110919	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.5481
chr7	36366045	36366062	protein_coding	Rgs9bp	utr3	ENSMUSG00000056043	ProperStrand	12	chr18	63109676	63109692	protein_coding	Apcdd1	exon	ENSMUSG00000071847	NonProperStrand	254	1	-13.7033
chr19	49187365	49187382	SINE	MIR	MIR	chr19MIR49187354	ProperStrand	1	chr18	35842980	35843037	protein_coding	Dnajc18	intron	ENSMUSG00000024350	ProperStrand	4	1	-inf
chr14	41747526	41747542	protein_coding	Tspan14	exon	ENSMUSG00000037824	NonProperStrand	7	chr2	130101974	130102032	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-9.7314
chr13	101387655	101387671	protein_coding	Rad17	exon	ENSMUSG00000021635	ProperStrand	8	chr11	36140937	36140955	protein_coding	Odz2	intron	ENSMUSG00000049336	ProperStrand	106	1	-16.2765
chr4	147928915	147928934	protein_coding	Mtor	intron	ENSMUSG00000028991	ProperStrand	65	chr10	23505152	23505222	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.1260
chr2	63936035	63936053	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr4	122968602	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	6	-9.6466
chr15	79913286	79913325	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr3	85904465	85904533	snoRNA	ENSMUSG00000065847_SNORA32	.	ENSMUSG00000065847	ProperStrand	40	1	-4.3555
chr9	120038458	120038677	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	chr4	131908684	131908896	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	280	-15.8767
chr8	75687960	75687979	protein_coding	Large	intron	ENSMUSG00000004383	NonProperStrand	16	chr5	115983444	115983460	protein_coding	Pxn	intron	ENSMUSG00000029528	ProperStrand	171	2	-19.0370
chr5	130357054	130357089	protein_coding	Chchd2	utr3	ENSMUSG00000070493	ProperStrand	16	chr7	116663653	116663743	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	6	-inf
chr18	80637785	80637816	protein_coding	Ctdp1	intron	ENSMUSG00000033323	ProperStrand	69	chr10	110918549	110918639	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-3.1941
chr19	44042976	44044494	protein_coding	Cpn1	exon	ENSMUSG00000025196	ProperStrand	11	chr18	33954827	33954878	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-6.8319
chr9	87608336	87608352	protein_coding	Tbx18	exon	ENSMUSG00000032419	ProperStrand	19	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-10.0630
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr15	34370545	34370680	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-0.8713
chr2	90235292	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	82560642	82560658	protein_coding	Frem1	exon	ENSMUSG00000059049	NonProperStrand	14	1	-7.3487
chr8	96560721	96560821	protein_coding	Nudt21	utr5	ENSMUSG00000031754	ProperStrand	33	chr5	74489642	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-4.9189
chr5	136265610	136265962	protein_coding	Mdh2	exon	ENSMUSG00000019179	ProperStrand	50	chr9	120038564	120038607	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.3693
chr7	52309977	52309993	protein_coding	Prrg2	exon	ENSMUSG00000007837	NonProperStrand	281	chr19	8799581	8799641	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-3.7846
chr4	135494991	135495007	protein_coding	Fuca1	exon	ENSMUSG00000028673	ProperStrand	16	chr4	131865442	131865515	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-6.5937
chr10	79138266	79138282	protein_coding	Gm16517	exon	ENSMUSG00000020308	ProperStrand	43	chr10	80640588	80640813	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-6.7590
chr16	36886302	36887328	antisense	4930565N06Rik	.	ENSMUSG00000084834	ProperStrand	27	chr13	46765135	46765199	protein_coding	C78339	exon	ENSMUSG00000069237	ProperStrand	8	1	-18.5476
chr4	132324610	132324690	protein_coding	Rpa2	exon	ENSMUSG00000028884	ProperStrand	8	chr5	108336397	108336487	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-8.9530
chr15	35844700	35846812	protein_coding	Vps13b	exon	ENSMUSG00000037646	ProperStrand	56	chr8	32260351	32260425	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-4.7627
chr13	113296447	113296477	protein_coding	Il6st	utr3	ENSMUSG00000021756	ProperStrand	34	chr6	125056462	125056507	protein_coding	Chd4	exon	ENSMUSG00000063870	ProperStrand	303	1	-11.2139
chrX	132335874	132335974	protein_coding	Gprasp1	exon	ENSMUSG00000043384	ProperStrand	57	chr11	6428044	6428119	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.2853
chr5	28398070	28398160	protein_coding	Insig1	exon	ENSMUSG00000045294	ProperStrand	35	chr17	35299559	35299639	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	2	-9.5209
chr7	25013773	25013873	protein_coding	Zfp109	exon	ENSMUSG00000074283	ProperStrand	1	chr7	116663712	116663768	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-inf
chr7	13892876	13892998	protein_coding	Lig1	exon	ENSMUSG00000056394	ProperStrand	89	chr16	23110901	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-1.1952
chr4	125381766	125382265	protein_coding	Grik3	exon	ENSMUSG00000001985	ProperStrand	126	chr1	162967498	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-2.1757
chr9	61762205	61762252	protein_coding	Rplp1	utr5	ENSMUSG00000007892	ProperStrand	116	chr7	119934402	119934484	protein_coding	Tead1	intron	ENSMUSG00000055320	ProperStrand	217	1	-9.4127
chr17	56556336	56556421	protein_coding	Ptprs	exon	ENSMUSG00000013236	ProperStrand	152	chr8	13876100	13876190	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	2	-8.7110
chr4	151431924	151431969	protein_coding	Nol9	exon	ENSMUSG00000028948	ProperStrand	93	chr1	162965540	162965593	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-4.4072
chr14	32479927	32479943	protein_coding	Btd	exon	ENSMUSG00000021900	NonProperStrand	74	chr15	79908929	79908955	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-5.0646
chr13	113296384	113296475	protein_coding	Il6st	utr3	ENSMUSG00000021756	ProperStrand	34	chr4	131865868	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-4.7600
chr6	119918643	119919316	protein_coding	Wnk1	exon	ENSMUSG00000045962	ProperStrand	221	chr17	35089181	35089233	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-3.0315
chr8	13416897	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr17	36000485	36000501	protein_coding	Nrm	exon	ENSMUSG00000059791	ProperStrand	253	1	-3.6853
chr13	97928410	97928511	protein_coding	Gfm2	intron	ENSMUSG00000021666	ProperStrand	26	chr10	23505151	23505215	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.5465
chr15	84596126	84596780	protein_coding	Arhgap8	exon	ENSMUSG00000078954	ProperStrand	7	chr19	8799597	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-11.1722
chr13	9833563	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr15	80927729	80927813	protein_coding	Mkl1	intron	ENSMUSG00000042292	ProperStrand	57	1	-5.0538
chr4	111971853	111971869	protein_coding	Skint3	utr3	ENSMUSG00000070868	ProperStrand	13	chr5	121655127	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-6.7475
chr11	115917798	115917888	protein_coding	Unk	intron	ENSMUSG00000020770	ProperStrand	21	chr10	110918549	110918654	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	10	-23.0033
chr16	50247933	50247949	protein_coding	Bbx	exon	ENSMUSG00000022641	NonProperStrand	5	chr19	6984447	6984464	protein_coding	Prdx5	utr5	ENSMUSG00000024953	ProperStrand	24	1	-18.9154
chr11	116535914	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr3	90073250	90073268	protein_coding	Dennd4b	exon	ENSMUSG00000042404	NonProperStrand	4	1	-11.5504
chr8	112387973	112387989	antisense	Gm17344	.	ENSMUSG00000078143	NonProperStrand	100	chr5	121655127	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.8215
chr15	98356817	98356909	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	chr5	108334197	108334282	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	3	-1.7572
chr18	12002085	12002123	protein_coding	Cables1	intron	ENSMUSG00000040957	ProperStrand	5	chr16	23110882	23110972	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-7.3377
chr11	107357076	107358858	protein_coding	Psmd12	exon	ENSMUSG00000020720	ProperStrand	31	chr4	131908236	131908355	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-4.3850
chr6	83069868	83069904	protein_coding	Wbp1	exon	ENSMUSG00000030035	ProperStrand	3	chr16	23110977	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-9.5778
chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	chr8	113362493	113362512	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	1	-5.1929
chr4	56910527	56910617	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	chr5	23358028	23358099	snoRNA	ENSMUSG00000093321_Snord93	.	ENSMUSG00000093321	ProperStrand	218	4	-11.9707
chr2	28748005	28760127	protein_coding	Ddx31	exon	ENSMUSG00000026806	ProperStrand	8	chr5	108334221	108334311	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-8.8896
chrX	108563931	108563947	protein_coding	Rps6ka6	exon	ENSMUSG00000025665	ProperStrand	17	chr18	35716685	35716775	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.4666
chr1	36849857	36849947	protein_coding	Tmem131	exon	ENSMUSG00000026116	ProperStrand	129	chr10	56108325	56108364	protein_coding	Gja1	exon	ENSMUSG00000050953	ProperStrand	70	1	-11.4668
chr5	36955982	36955998	protein_coding	D5Ertd579e	exon	ENSMUSG00000029190	ProperStrand	43	chr19	8963088	8963165	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.8490
chr10	82213104	82213162	protein_coding	Nfyb	utr3	ENSMUSG00000020248	ProperStrand	25	chr7	118219574	118219646	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	7	-20.2535
chr13	76341035	76341055	protein_coding	Fam81b	intron	ENSMUSG00000078966	NonProperStrand	220	chr11	62416951	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-3.5569
chr9	100512544	100512566	protein_coding	Stag1	intron	ENSMUSG00000037286	ProperStrand	10	chr5	108336363	108336406	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-8.4814
chr17	68211049	68211065	protein_coding	Arhgap28	intron	ENSMUSG00000024043	NonProperStrand	7	chrX	72349774	72351039	protein_coding	Dkc1	exon	ENSMUSG00000031403	ProperStrand	89	1	-16.9931
chr8	28150497	28150522	SINE	B3	B2	chr8B328150387	NonProperStrand	1	chr4	116875201	116875249	snRNA	ENSMUSG00000070228_U5	.	ENSMUSG00000070228	ProperStrand	131	1	-inf
chr2	172765179	172765197	protein_coding	Bmp7	exon	ENSMUSG00000008999	NonProperStrand	10	chr17	45707316	45707332	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	1	-10.3744
chr15	102110890	102110906	protein_coding	Mfsd5	exon	ENSMUSG00000045665	NonProperStrand	3	chr4	131865855	131865915	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.6896
chr9	48836184	48836244	protein_coding	Usp28	exon	ENSMUSG00000032267	ProperStrand	63	chr11	98878357	98878447	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	2	-10.0428
chr1	138261743	138261766	LTR	MTC	MaLR	chr1MTC138261745	ProperStrand	5	chr16	23110828	23110889	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-11.1940
chr2	121189344	121189434	protein_coding	Ckmt1	utr3	ENSMUSG00000000308	ProperStrand	3	chr19	4316734	4316788	protein_coding	Kdm2a	utr3	ENSMUSG00000054611	ProperStrand	71	1	-19.8819
chr14	49092131	49092148	protein_coding	6720456H20Rik	exon	ENSMUSG00000036339	ProperStrand	28	chr11	20149315	20149338	protein_coding	Cep68	utr5	ENSMUSG00000044066	ProperStrand	15	1	-17.5143
chr14	34907593	34907918	protein_coding	Anxa8	exon	ENSMUSG00000021950	ProperStrand	26	chr5	108336378	108336409	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-6.5273
chr9	44152163	44152237	protein_coding	Hmbs	utr5	ENSMUSG00000032126	ProperStrand	10	chr10	23505156	23505246	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-7.3782
chr17	56716255	56716273	protein_coding-noncoding	Safb2	utr3	ENSMUSG00000042625	NonProperStrand	3	chr3	123210854	123210945	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-13.7357
chr3	106909227	106909243	protein_coding	Kcna2	utr3	ENSMUSG00000040724	ProperStrand	17	chr7	116664794	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-4.8991
chr11	22736623	22736674	protein_coding	Commd1	utr3	ENSMUSG00000051355	ProperStrand	36	chr1	89673614	89673714	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-4.2158
chr4	115979943	115980033	protein_coding	Mast2	exon	ENSMUSG00000003810	ProperStrand	37	chr11	100490040	100490120	protein_coding	Zfp385c	utr3	ENSMUSG00000014198	ProperStrand	3	1	-21.0941
chr9	44794500	44794516	protein_coding	Cd3d	utr3	ENSMUSG00000032094	NonProperStrand	2	chr1	174248951	174249427	protein_coding	Igsf8	exon	ENSMUSG00000038034	ProperStrand	25	2	-inf
chrX	20224740	20224830	protein_coding	Rbm10	exon	ENSMUSG00000031060	ProperStrand	31	chr4	131865411	131865491	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-5.2733
chr9	81949794	81949813	protein_coding	Mei4	intron	ENSMUSG00000043289	NonProperStrand	42	chr1	162967491	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	3	-10.0700
chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-4.9447
chr17	63453256	63453316	protein_coding	Fbxl17	intron	ENSMUSG00000023965	ProperStrand	14	chr19	8963066	8963166	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.9719
chr12	8758715	8758778	protein_coding	Pum2	utr3	ENSMUSG00000020594	ProperStrand	39	chr19	8800370	8800470	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-4.3397
chr3	11580450	11580467	LINE	Lx3A	L1	chr3Lx3A11580299	ProperStrand	53	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-9.1757
chr7	109324911	109328959	protein_coding	Nup98	utr5	ENSMUSG00000063550	ProperStrand	100	chr13	21842249	21842349	protein_coding	Hist1h4k	exon	ENSMUSG00000064288	ProperStrand	46	1	-12.8238
chr2	28368859	28368877	protein_coding	Ralgds	utr5	ENSMUSG00000026821	NonProperStrand	60	chr7	148634747	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-3.9861
chr8	13416895	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr7	150717298	150717416	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	4	-1.7627
chr9	40609367	40609389	protein_coding	Hspa8	utr5	ENSMUSG00000015656	ProperStrand	798	chr11	106362338	106362373	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-1.2660
chr8	104510035	104510052	LINE	L1_Rod	L1	chr8L1_Rod104509928	NonProperStrand	26	chr2	144087331	144087450	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	2	-13.1357
chr12	85990189	85990207	protein_coding	Vrtn	exon	ENSMUSG00000071235	NonProperStrand	1	chr4	131908320	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-inf
chr2	91516162	91516245	protein_coding	Atg13	utr3	ENSMUSG00000027244	ProperStrand	22	chr13	93209562	93209578	protein_coding	Ankrd34b	exon	ENSMUSG00000045034	NonProperStrand	28	1	-16.8477
chr2	3143276	3143338	protein_coding	Fam171a1	exon	ENSMUSG00000050530	ProperStrand	12	chr10	110918549	110918639	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-6.5914
chr8	74702806	74702896	protein_coding	Rab8a	intron	ENSMUSG00000003037	ProperStrand	8	chr8	113860035	113860115	protein_coding	Mlkl	intron	ENSMUSG00000012519	NonProperStrand	2	1	-26.0014
chr15	85769574	85769616	protein_coding	Celsr1	exon	ENSMUSG00000016028	ProperStrand	56	chr11	77995189	77995254	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	3	-14.4702
chr4	43505657	43505720	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr7	51036986	51038131	protein_coding	Klk10	exon	ENSMUSG00000030693	ProperStrand	1	1	-inf
chr19	22498509	22498526	protein_coding	Trpm3	intron	ENSMUSG00000052387	ProperStrand	54	chr17	39985356	39985423	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-6.1398
chr5	23883465	23883481	protein_coding	Nos3	exon	ENSMUSG00000028978	ProperStrand	13	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-12.0405
chr4	124615845	124615862	lincRNA	9930104L06Rik	exon	ENSMUSG00000044730	ProperStrand	15	chr1	162965530	162965588	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.9503
chr8	98269959	98270096	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	chr2	26494708	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	28	-5.5610
chr6	87138823	87154416	protein_coding	Antxr1	exon	ENSMUSG00000033420	ProperStrand	70	chrX	149932803	149932879	protein_coding	Ubqln2	utr5	ENSMUSG00000050148	ProperStrand	12	2	-inf
chr4	129272326	129272391	protein_coding	Eif3i	exon	ENSMUSG00000028798	ProperStrand	9	chrX	34622928	34623018	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-6.8852
chr6	113259997	113260020	protein_coding	Brpf1	exon	ENSMUSG00000001632	ProperStrand	23	chr9	15119968	15120058	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	1	-11.6475
chr9	88417345	88417398	lincRNA	Snhg5	exon	ENSMUSG00000032424	ProperStrand	13	chr1	162966203	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-10.6813
chr17	7805021	7805110	LTR	ORR1B1	MaLR	chr17ORR1B17804830	ProperStrand	1	chr17	7805389	7805479	SINE	B2_Mm2	B2	chr17B2_Mm27805310	ProperStrand	1	1	-inf
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr7	38354919	38354935	protein_coding	Zfp536	exon	ENSMUSG00000043456	NonProperStrand	236	1	-3.2990
chr2	181325063	181325138	protein_coding	Znf512b	intron	ENSMUSG00000000823	ProperStrand	17	chr1	162965983	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-6.0488
chr11	4043338	4043354	protein_coding	Ccdc157	utr3	ENSMUSG00000051427	ProperStrand	11	chr10	23505581	23505626	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-11.0033
chr11	97528148	97528438	protein_coding	Mllt6	exon	ENSMUSG00000038437	ProperStrand	110	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	2	-10.5579
chr3	41667839	41667929	LINE	Lx9	L1	chr3Lx941667714	ProperStrand	1	chr3	41667496	41667586	LTR	MTC	MaLR	chr3MTC41667192	NonProperStrand	1	1	-inf
chr6	100182355	100182383	protein_coding	Rybp	exon	ENSMUSG00000072872	ProperStrand	51	chr11	6428077	6428155	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.4890
chr1	155067370	155099222	protein_coding	Lamc1	utr3	ENSMUSG00000026478	ProperStrand	239	chr14	76247741	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-3.2154
chr19	46107457	46107485	protein_coding	Ldb1	utr3	ENSMUSG00000025223	ProperStrand	42	chr8	73419663	73419763	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.7861
chr2	144116364	144116385	LTR	MLT2B2	ERVL	chr2MLT2B2144116217	NonProperStrand	17	chr4	131908236	131908298	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-6.1110
chr1	88030214	88030296	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	chr2	144087324	144087381	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-2.0810
chr5	115784560	115784585	protein_coding	Gatc	exon	ENSMUSG00000029536	NonProperStrand	1	chr18	73693172	73693191	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-inf
chr12	55847399	55847415	protein_coding	Snx6	utr3	ENSMUSG00000005656	ProperStrand	9	chr2	162893898	162893951	protein_coding	Mybl2	exon	ENSMUSG00000017861	ProperStrand	230	1	-14.4973
chr3	102971779	102971812	protein_coding	Dennd2c	utr3	ENSMUSG00000007379	ProperStrand	19	chr1	129271706	129271753	snoRNA	ENSMUSG00000065687_snoU6-53	.	ENSMUSG00000065687	ProperStrand	78	1	-15.1177
chr16	11144201	11144239	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr7	151033086	151033176	protein_coding	Dhcr7	exon	ENSMUSG00000058454	NonProperStrand	2	1	-18.2639
chr6	149278280	149278328	protein_coding	2810474O19Rik	intron	ENSMUSG00000032712	ProperStrand	70	chr12	112779226	112779283	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	4	-14.2283
chr17	33961593	33962549	protein_coding	Ndufa7	exon	ENSMUSG00000041881	ProperStrand	64	chr4	56910536	56910626	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-5.9797
chr2	29781481	29781571	protein_coding	Odf2	exon	ENSMUSG00000026790	ProperStrand	58	chr14	33005156	33005236	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-4.0574
chrX	130496426	130496668	protein_coding	Sytl4	exon	ENSMUSG00000031255	ProperStrand	169	chr17	27769298	27771091	protein_coding	Rps10	exon	ENSMUSG00000052146	ProperStrand	94	1	-10.3335
chr9	64324488	64324505	protein_coding	Megf11	intron	ENSMUSG00000036466	ProperStrand	15	chr4	131865923	131865977	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.2332
chr3	16104760	16104850	protein_coding	Ythdf3	exon	ENSMUSG00000047213	ProperStrand	22	chr10	23505173	23505253	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.8416
chr16	22382831	22382856	protein_coding	Etv5	utr3	ENSMUSG00000013089	ProperStrand	88	chr14	31867350	31867368	protein_coding	Pbrm1	exon	ENSMUSG00000042323	ProperStrand	87	1	-11.7969
chr13	70749445	70753865	protein_coding	BC018507	exon	ENSMUSG00000034525	ProperStrand	43	chr2	26768394	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	4	-19.5086
chr17	36097663	36097764	protein_coding	Abcf1	exon	ENSMUSG00000038762	ProperStrand	206	chr5	151755616	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-5.3090
chrX	103403332	103403348	protein_coding	Taf9b	utr3	ENSMUSG00000047242	NonProperStrand	4	chr16	23110962	23110999	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-8.2228
chr7	116663632	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	NonProperStrand	51	chr19	8800085	8800113	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	NonProperStrand	4	1	-22.1640
chr10	119441034	119441051	protein_coding	Grip1	intron	ENSMUSG00000034813	ProperStrand	38	chr2	166890502	166890559	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-8.4728
chr11	72922396	72922413	protein_coding	Itgae	intron	ENSMUSG00000005947	ProperStrand	16	chr7	142887344	142887386	protein_coding	Mki67	exon	ENSMUSG00000031004	ProperStrand	286	1	-12.8703
chr3	134933844	134936124	protein_coding	Cenpe	exon	ENSMUSG00000045328	ProperStrand	71	chr4	131865891	131865971	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.5136
chr2	52189986	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr17	24669835	24669868	protein_coding	Rab26	intron	ENSMUSG00000079657	ProperStrand	11	1	-12.3023
chr5	144945667	144945757	protein_coding	Lmtk2	utr3	ENSMUSG00000038970	ProperStrand	60	chr16	23111372	23111432	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.2589
chr10	127548173	127548222	protein_coding	Baz2a	exon	ENSMUSG00000040054	ProperStrand	274	chr12	112779185	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	10	-19.3259
chr2	155834164	155834343	protein_coding	Ergic3	exon	ENSMUSG00000005881	ProperStrand	15	chr2	44519251	44519268	protein_coding	Gtdc1	intron	ENSMUSG00000036890	ProperStrand	22	1	-18.3168
chr19	60845785	60845875	protein_coding	Eif3a	exon	ENSMUSG00000024991	ProperStrand	287	chr7	117189957	117190037	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-1.7707
chr7	136800631	136800649	SINE	RSINE1	B4	chr7RSINE1136800606	ProperStrand	216	chr4	116827147	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-4.5398
chr17	27159710	27159776	protein_coding	Bak1	exon	ENSMUSG00000057789	ProperStrand	17	chr7	4762089	4762182	protein_coding	Ube2s	exon	ENSMUSG00000060860	ProperStrand	62	1	-15.8218
chr4	141032144	141032250	protein_coding	Spen	exon	ENSMUSG00000040761	ProperStrand	161	chr5	130295489	130295537	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	2	-5.7643
chr11	97531630	97531647	protein_coding	Mllt6	exon	ENSMUSG00000038437	NonProperStrand	12	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-6.4045
chr17	45708553	45708751	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr2	146089697	146089717	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	ProperStrand	35	1	-7.8063
chr8	96556301	96556341	protein_coding	Nudt21	exon	ENSMUSG00000031754	ProperStrand	33	chr4	131908356	131908394	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.3621
chr5	116010816	116011448	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	chr18	33954824	33954932	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-1.9381
chr9	20303571	20303620	protein_coding	Zfp266	exon	ENSMUSG00000060510	ProperStrand	20	chr18	35714147	35714237	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	9	-inf
chr8	74239441	74239625	protein_coding	Fcho1	exon	ENSMUSG00000070000	ProperStrand	38	chr16	23110841	23110860	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.7634
chr10	127962583	127962600	protein_coding	Esyt1	exon	ENSMUSG00000025366	NonProperStrand	32	chr7	71035304	71035401	protein_coding	Klf13	utr3	ENSMUSG00000052040	ProperStrand	28	2	-19.5241
chrX	105190993	105191010	LTR	RLTR9E	ERVK	chrXRLTR9E105190921	NonProperStrand	20	chr11	106362637	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-9.6204
chr11	116535952	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr2	29922368	29924486	protein_coding	Set	exon	ENSMUSG00000054766	ProperStrand	167	3	-9.5896
chr4	117329355	117329413	protein_coding	Eri3	intron	ENSMUSG00000033423	ProperStrand	246	chr2	75503158	75503307	protein_coding	Hnrnpa3	exon	ENSMUSG00000059005	ProperStrand	289	6	-19.1241
chr2	26317462	26317562	protein_coding	Notch1	intron	ENSMUSG00000026923	NonProperStrand	8	chr18	35714252	35714290	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-7.4301
chr17	56851032	56851119	protein_coding	Ranbp3	utr3	ENSMUSG00000002372	ProperStrand	34	chr7	150717298	150717348	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	2	-10.7279
chr11	6428032	6428170	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr16	23110455	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	90	-1.4263
chr12	104330679	104330695	protein_coding	Unc79	intron	ENSMUSG00000021198	NonProperStrand	25	chr5	111082719	111082737	protein_coding	Ddx51	exon	ENSMUSG00000029504	ProperStrand	54	1	-15.2939
chr4	62918305	62918367	protein_coding	Col27a1	intron	ENSMUSG00000045672	ProperStrand	32	chr9	15118303	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-4.6545
chr13	66541964	66542004	protein_coding	2410141K09Rik	utr5	ENSMUSG00000074832	ProperStrand	1	chr7	116663711	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-inf
chr17	56448859	56448910	protein_coding	Uhrf1	exon	ENSMUSG00000001228	ProperStrand	229	chr4	131908232	131908347	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-1.2357
chr19	8798481	8798554	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	chr7	118219574	118219740	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	12	-1.1284
chr2	70706755	70706775	LINE	L1MC1	L1	chr2L1MC170706690	ProperStrand	1	chr16	23110981	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr6	94776857	94776876	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	chr5	74489595	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	6	-5.6808
chr6	104618158	104618238	protein_coding	Cntn6	intron	ENSMUSG00000030092	NonProperStrand	5	chr14	34780655	34780745	protein_coding	Zfp488	utr3	ENSMUSG00000044519	ProperStrand	54	1	-18.6938
chr10	120709244	120712786	protein_coding	Tbc1d30	exon	ENSMUSG00000052302	ProperStrand	233	chr11	78654505	78654560	protein_coding	1810012P15Rik	utr3	ENSMUSG00000072640	ProperStrand	5	1	-15.7296
chr5	108336391	108336469	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	chr15	71624773	71624799	snoRNA	ENSMUSG00000088895_SNORA81	.	ENSMUSG00000088895	ProperStrand	348	7	-13.6277
chr4	69942474	69942522	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	chr17	36000485	36000501	protein_coding	Nrm	exon	ENSMUSG00000059791	ProperStrand	253	1	-5.2715
chr12	86642295	86642319	protein_coding	Nek9	utr3	ENSMUSG00000034290	ProperStrand	50	chr11	68887040	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-4.4910
chr11	42440243	42440259	protein_coding	Gabrb2	exon	ENSMUSG00000007653	ProperStrand	248	chrX	147513705	147513722	protein_coding	Fgd1	exon	ENSMUSG00000025265	ProperStrand	96	1	-9.5249
chr6	94776857	94776876	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	chr2	26494708	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	7	-4.9338
chr7	38354919	38354935	protein_coding	Zfp536	exon	ENSMUSG00000043456	NonProperStrand	236	chr7	118219571	118219616	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-1.7729
chr17	6232006	6232022	protein_coding	Tulp4	exon	ENSMUSG00000034377	NonProperStrand	265	chr7	117190015	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-0.9772
chr7	116674908	116674926	protein_coding	St5	intron	ENSMUSG00000031024	ProperStrand	42	chr5	121655100	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.4217
chr15	82035275	82035333	protein_coding	Srebf2	utr3	ENSMUSG00000022463	ProperStrand	592	chr4	122968663	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	2	-3.6815
chr8	114237835	114237935	protein_coding	Bcar1	exon	ENSMUSG00000031955	ProperStrand	44	chr10	127521231	127521270	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	1	-9.4174
chr18	33954827	33954908	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	chr7	88674777	88674867	snoRNA	ENSMUSG00000093107_AC167122.1	.	ENSMUSG00000093107	ProperStrand	110	6	-14.0694
chr16	30152587	30152637	SINE	B2_Mm1t	B2	chr16B2_Mm1t30152494	ProperStrand	1	chr7	134671400	134671490	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-inf
chr2	90235299	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr15	81560306	81560322	protein_coding	Rangap1	utr5	ENSMUSG00000022391	NonProperStrand	35	2	-9.0354
chr11	52066883	52066928	protein_coding	Tcf7	utr3	ENSMUSG00000000782	ProperStrand	24	chr17	39985617	39985722	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	2	-12.4513
chr2	32563527	32563545	protein_coding	Cdk9	exon	ENSMUSG00000009555	NonProperStrand	49	chr9	57476486	57476531	protein_coding	Csk	exon	ENSMUSG00000032312	ProperStrand	17	1	-16.3372
chr2	70927899	70927915	protein_coding	Dcaf17	exon	ENSMUSG00000041966	NonProperStrand	89	chr5	111121065	111121194	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	6	-inf
chrX	71554473	71554513	protein_coding	Gdi1	exon	ENSMUSG00000015291	ProperStrand	24	chr9	15119733	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-7.2461
chr11	94158307	94158397	protein_coding	Luc7l3	exon	ENSMUSG00000020863	ProperStrand	38	chr18	33954840	33954920	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-4.3641
chr18	6069875	6069922	protein_coding	Arhgap12	exon	ENSMUSG00000041225	ProperStrand	25	chr17	39985306	39985354	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-7.6779
chr11	103707688	103707704	protein_coding	Nsf	exon	ENSMUSG00000034187	ProperStrand	20	chr2	145077958	145209255	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-9.9417
chr17	46663594	46663610	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chrX	84483704	84483720	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-4.2587
chr4	88497254	88497270	LTR	RLTR28	ERVL	chr4RLTR2888497154	NonProperStrand	9	chr19	8963027	8963083	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.8692
chr17	39980030	39980071	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr4	97874867	97874885	LTR	ORR1E	MaLR	chr4ORR1E97874755	NonProperStrand	2	1	-14.6789
chr7	95266597	95266613	protein_coding	Grm5	intron	ENSMUSG00000049583	NonProperStrand	145	chr17	39985174	39985249	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-4.2278
chr2	127053659	127053725	protein_coding	Snrnp200	exon	ENSMUSG00000003660	ProperStrand	203	chr17	13112489	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-2.3645
chr5	114581458	114588973	protein_coding	Ung	exon	ENSMUSG00000029591	ProperStrand	20	chr16	23110961	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-4.8132
chr16	32906141	32906158	protein_coding	Fyttd1	utr3	ENSMUSG00000022800	ProperStrand	31	chr7	116664806	116664869	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.7407
chr2	145076804	145209255	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	chr4	122968597	122968680	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-1.2861
chr2	143793236	143807811	protein_coding	Rrbp1	exon	ENSMUSG00000027422	ProperStrand	76	chr9	15119643	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-3.9804
chr18	35034305	35034395	LTR	ORR1C2	MaLR	chr18ORR1C235034296	NonProperStrand	1	chr18	35034096	35034186	SINE	B1F1	Alu	chr18B1F135034111	NonProperStrand	1	1	-inf
chr11	6428109	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr19	8963032	8963048	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-0.7802
chr8	97981352	97984025	protein_coding	Csnk2a2	exon	ENSMUSG00000046707	ProperStrand	21	chr8	129468783	129468863	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-6.4742
chr9	103249374	103249411	protein_coding	Topbp1	exon	ENSMUSG00000032555	ProperStrand	81	chr7	135857917	135857983	protein_coding	Mcmbp	exon	ENSMUSG00000048170	ProperStrand	87	4	-19.4596
chr19	6374065	6374164	protein_coding	Sf1	exon	ENSMUSG00000024949	ProperStrand	251	chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-3.6999
chr13	88569462	88569482	LTR	RMER6D	ERVK	chr13RMER6D88569354	ProperStrand	42	chr7	117166794	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	3	-12.8603
chr3	80316126	80316144	Low_complexity	GA-rich	Low_complexity	chr3GA-rich80316030	ProperStrand	2	chr8	83137837	83137853	protein_coding	Frem3	exon	ENSMUSG00000042353	NonProperStrand	53	1	-inf
chr16	57391769	57391792	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr10	62040957	62040974	protein_coding	2510003E04Rik	utr3	ENSMUSG00000036955	ProperStrand	8	1	-11.9227
chr16	23110455	23110521	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	chr5	31190509	31190546	tRNA	tRNA109-TyrGTA	.	288633	ProperStrand	64	1	-2.3523
chr4	40155307	40155397	protein_coding-noncoding	Ddx58	utr3	ENSMUSG00000040296	ProperStrand	3	chr4	40155483	40155563	protein_coding	Ddx58	exon	ENSMUSG00000040296	ProperStrand	18	1	-22.0931
chrX	40944841	40944857	protein_coding	Gm362	exon	ENSMUSG00000078320	ProperStrand	129	chr3	123210940	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-0.9606
chr6	48035922	48035941	protein_coding	Zfp746	intron	ENSMUSG00000057691	ProperStrand	23	chr16	23111777	23111817	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.5778
chr10	76224902	76224934	protein_coding	Pcbp3	utr3	ENSMUSG00000001120	ProperStrand	12	chr15	100021468	100021513	protein_coding	Dip2b	exon	ENSMUSG00000023026	ProperStrand	48	1	-16.9933
chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	chr2	130101241	130101310	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	3	-4.3879
chr11	69037669	69037685	protein_coding	Gucy2e	exon	ENSMUSG00000020890	NonProperStrand	99	chr5	138220919	138220988	protein_coding	Ppp1r35	exon	ENSMUSG00000029725	ProperStrand	7	2	-inf
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	1	-4.4082
chrX	7502007	7502068	protein_coding	Eras	exon	ENSMUSG00000031160	ProperStrand	2	chr3	153573527	153573594	snoRNA	ENSMUSG00000064731_Snord45b	.	ENSMUSG00000064731	ProperStrand	205	1	-19.4371
chr2	118611946	118611962	protein_coding	Disp2	exon	ENSMUSG00000040035	NonProperStrand	204	chr11	69731499	69731516	protein_coding	Eif5a	exon	ENSMUSG00000078812	ProperStrand	164	1	-8.8443
chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	chr7	134671399	134671505	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-4.2305
chr4	40144801	40144846	protein_coding	Aco1	utr3	ENSMUSG00000028405	ProperStrand	25	chr8	73419682	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-7.9475
chr2	4974190	4974207	protein_coding	Optn	exon	ENSMUSG00000026672	ProperStrand	451	chr9	15119968	15120001	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-3.3687
chr6	52590227	52590305	protein_coding	Hibadh	utr5	ENSMUSG00000029776	ProperStrand	33	chr11	97642952	97643020	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	5	-15.1993
chr6	95556189	95556207	protein_coding	Suclg2	intron	ENSMUSG00000061838	ProperStrand	35	chr2	26494781	26494828	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.1058
chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	chr10	79325439	79325493	protein_coding	Ptbp1	exon	ENSMUSG00000006498	ProperStrand	129	2	-13.2768
chr2	164226383	164226400	protein_coding	Matn4	exon	ENSMUSG00000016995	ProperStrand	15	chr6	125136406	125136422	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	1	-9.2375
chr17	32472938	32473053	protein_coding	Akap8l	exon	ENSMUSG00000002625	ProperStrand	10	chr1	88252838	88252879	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-10.2832
chr7	116663633	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	chr8	13876096	13876226	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	13	-1.8137
chr11	68512948	68615656	protein_coding	Myh10	exon	ENSMUSG00000020900	ProperStrand	91	chr16	23110892	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-2.5157
chr7	117189901	117189991	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	chr9	15130702	15130783	snoRNA	ENSMUSG00000077506_Scarna9	.	ENSMUSG00000077506	ProperStrand	148	1	-1.7941
chr7	4417013	4420470	protein_coding	Eps8l1	exon	ENSMUSG00000006154	ProperStrand	3	chr8	125315825	125315964	protein_coding	Acsf3	intron	ENSMUSG00000015016	ProperStrand	12	3	-inf
chr7	20281639	20282306	protein_coding	Apoe	utr3	ENSMUSG00000002985	ProperStrand	231	chr16	23111726	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-1.3112
chr2	179322378	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr11	67167096	67167112	protein_coding	Myh13	exon	ENSMUSG00000060180	ProperStrand	145	2	-14.9178
chr15	79315454	79315583	protein_coding	Kcnj4	exon	ENSMUSG00000044216	ProperStrand	5	chr16	23110990	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr14	55634411	55635007	protein_coding	Ngdn	utr5	ENSMUSG00000022204	ProperStrand	2	chr1	162965530	162965573	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-10.5602
chr13	114408025	114408125	protein_coding	Snx18	exon	ENSMUSG00000042364	ProperStrand	47	chr18	35714217	35714260	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-3.8965
chr15	98604924	98606960	protein_coding	Wnt10b	exon	ENSMUSG00000022996	NonProperStrand	189	chr6	115757991	115758012	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-3.3001
chr6	38461892	38461912	protein_coding	Ubn2	utr3	ENSMUSG00000038538	ProperStrand	86	chr18	35716744	35716878	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-4.6240
chr2	75704811	75704877	protein_coding	Agps	exon	ENSMUSG00000042410	ProperStrand	22	chr10	110918549	110918640	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	4	-16.7523
chr6	21767464	21767480	protein_coding	Tspan12	intron	ENSMUSG00000029669	ProperStrand	8	chr8	87525135	87525238	protein_coding	Hook2	exon	ENSMUSG00000052566	ProperStrand	204	1	-15.0078
chr6	71830886	71830909	protein_coding	Ptcd3	utr3	ENSMUSG00000063884	ProperStrand	34	chr12	88912985	88913005	protein_coding	Gm2022	intron	ENSMUSG00000071217	NonProperStrand	57	1	-14.5512
chr3	97817679	97851652	protein_coding	Notch2	exon	ENSMUSG00000027878	ProperStrand	86	chr15	98692965	98692982	protein_coding	Mll2	exon	ENSMUSG00000048154	NonProperStrand	20	1	-14.8190
chr10	33650004	33650020	protein_coding	Zufsp	utr3	ENSMUSG00000039531	ProperStrand	9	chr11	69483134	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-14.4296
chr2	129033915	129033973	protein_coding	Slc20a1	exon	ENSMUSG00000027397	ProperStrand	81	chr19	8898945	8898962	protein_coding	Hnrnpul2	exon	ENSMUSG00000071659	ProperStrand	93	1	-11.8294
chr1	39902173	39902514	LINE	L2b	L2	chr1L2b39902159	NonProperStrand	28	chr1	162965531	162965554	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.7132
chr7	137536098	137639483	protein_coding	Ate1	utr3	ENSMUSG00000030850	ProperStrand	14	chr9	15119648	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	8	-22.2691
chr11	6428077	6428156	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr7	86611342	86611377	tRNA	tRNA387-ArgTCG	.	507463	ProperStrand	77	1	-2.7483
chr9	44422374	44431752	protein_coding	Ddx6	exon	ENSMUSG00000032097	ProperStrand	59	chr14	76247753	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-4.2039
chr4	98428284	98432159	protein_coding	Kank4	exon	ENSMUSG00000035407	ProperStrand	35	chr7	148634700	148634800	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-5.0192
chr8	74446729	74446745	protein_coding	Zfp617	intron	ENSMUSG00000066880	NonProperStrand	208	chr17	39985306	39985355	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-3.5558
chr8	74864176	74864266	SINE	B3	B2	chr8B374864066	ProperStrand	1	chr8	74864282	74864372	SINE	RSINE1	B4	chr8RSINE174864299	ProperStrand	1	1	-inf
chr13	99018400	99018465	protein_coding	Utp15	utr3	ENSMUSG00000041747	ProperStrand	19	chr16	23110852	23110910	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7016
chr11	98856621	98872317	protein_coding	Top2a	exon	ENSMUSG00000020914	ProperStrand	324	chrX	34622904	34623038	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	3	-2.3015
chr7	31442193	31442283	protein_coding	Haus5	exon	ENSMUSG00000078762	ProperStrand	2	chr10	23505153	23505233	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-8.0476
chr7	4077203	4079849	protein_coding	Ttyh1	exon	ENSMUSG00000030428	ProperStrand	10	chr18	33954826	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	3	-16.2835
chr3	68873023	68873121	protein_coding	Kpna4	utr3	ENSMUSG00000027782	ProperStrand	21	chr16	23110561	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.3878
chr11	119136228	119136244	protein_coding	Gaa	exon	ENSMUSG00000025579	NonProperStrand	201	chr9	110845094	110845117	protein_coding	Tdgf1	exon	ENSMUSG00000032494	ProperStrand	218	1	-8.3067
chr5	117737435	117737455	protein_coding	Pebp1	exon	ENSMUSG00000032959	ProperStrand	54	chr7	116663638	116663769	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.6939
chr11	74249238	74249254	protein_coding	Rap1gap2	exon	ENSMUSG00000038807	ProperStrand	15	chr16	23111690	23111811	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-7.4115
chr2	90235285	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	17040701	17040717	protein_coding	Tmem160	exon	ENSMUSG00000019158	ProperStrand	55	1	-4.6294
chr14	14731050	14731067	protein_coding	Gm281	intron	ENSMUSG00000084902	ProperStrand	23	chr2	26494808	26494826	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.9167
chr1	57863919	57863939	protein_coding	Spats2l	intron	ENSMUSG00000038305	ProperStrand	4	chr19	8963023	8963083	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-12.7372
chr7	117491536	117491586	protein_coding	Sbf2	intron	ENSMUSG00000038371	ProperStrand	17	chr5	111121066	111121091	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-8.9728
chr6	125064090	125064343	protein_coding	Chd4	exon	ENSMUSG00000063870	ProperStrand	303	chr19	8798773	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-1.9009
chr15	82980102	82980225	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr4	131866155	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	5	-0.7742
chr3	102807088	102807117	protein_coding	Sike1	utr3	ENSMUSG00000027854	ProperStrand	9	chr18	33954817	33954907	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	7	-19.0639
chr18	33359097	33359198	protein_coding	Stard4	utr3	ENSMUSG00000024378	ProperStrand	21	chr1	120732748	120732768	protein_coding	Gli2	exon	ENSMUSG00000048402	ProperStrand	148	5	-19.1429
chr1	40025144	40025190	protein_coding	Map4k4	intron	ENSMUSG00000026074	ProperStrand	348	chr8	129468746	129468836	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-1.3884
chr2	84679411	84679429	protein_coding	Slc43a1	utr5	ENSMUSG00000027075	NonProperStrand	10	chr11	115935746	115937022	protein_coding	Unc13d	exon	ENSMUSG00000057948	ProperStrand	89	1	-16.1994
chr4	43505657	43505683	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr6	146407342	146407442	protein_coding	Itpr2	intron	ENSMUSG00000030287	ProperStrand	20	1	-5.1523
chr8	125813281	125813701	protein_coding	Fanca	exon	ENSMUSG00000032815	ProperStrand	32	chr16	23110973	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.9664
chr8	131244240	131244333	protein_coding	Itgb1	exon	ENSMUSG00000025809	ProperStrand	35	chr16	23110549	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.4208
chr4	3520674	3520739	protein_coding	Tgs1	exon	ENSMUSG00000028233	ProperStrand	10	chrX	40944841	40944857	protein_coding	Gm362	exon	ENSMUSG00000078320	ProperStrand	129	1	-15.4712
chr6	30163114	30163140	protein_coding	Ube2h	utr3	ENSMUSG00000039159	ProperStrand	96	chr5	121655052	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.8934
chr2	84886581	84886804	protein_coding	Ssrp1	exon	ENSMUSG00000027067	ProperStrand	118	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-6.3979
chr18	75553854	75553872	protein_coding	Smad7	exon	ENSMUSG00000025880	NonProperStrand	14	chr8	73419657	73419757	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-13.9391
chr3	133150273	133150303	protein_coding	Tet2	exon	ENSMUSG00000040943	ProperStrand	192	chr11	97642952	97643080	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-1.5988
chr8	11427556	11427572	protein_coding	Col4a2	exon	ENSMUSG00000031503	ProperStrand	74	chr6	71832629	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-5.2021
chr18	21773958	21773974	protein_coding	Klhl14	intron	ENSMUSG00000042514	NonProperStrand	6	chr11	69483194	69483237	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-6.9324
chr8	13416895	13416912	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr3	88497912	88497983	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-1.2253
chr7	82243966	82244056	LINE	L1M5	L1	chr7L1M582243961	ProperStrand	1	chr7	82243844	82243924	LTR	ORR1E	MaLR	chr7ORR1E82243696	NonProperStrand	1	1	-inf
chr8	75281636	75281717	protein_coding	Sin3b	utr3	ENSMUSG00000031622	ProperStrand	66	chr2	158185532	158185622	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	6	-20.2317
chr3	108164017	108164107	protein_coding	Sort1	utr3	ENSMUSG00000068747	ProperStrand	32	chr1	89673587	89673634	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-4.4414
chr2	26085469	26085491	protein_coding	Qsox2	intron	ENSMUSG00000036327	NonProperStrand	2	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-inf
chr2	63936035	63936053	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr11	62416600	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	4	-3.5069
chr17	95160908	95218242	protein_coding	2610044O15Rik	exon	ENSMUSG00000066057	NonProperStrand	70	chr19	8799025	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-5.5306
chr14	59851811	59855843	protein_coding	Rcbtb1	utr3	ENSMUSG00000035469	ProperStrand	39	chr16	23110909	23111003	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	10	-14.9315
chr16	91405676	91405692	protein_coding	Ifnar2	utr3	ENSMUSG00000022971	NonProperStrand	23	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.0081
chr15	103029937	103029954	protein_coding	Cbx5	utr3	ENSMUSG00000009575	ProperStrand	98	chrX	54318874	54318891	protein_coding	Htatsf1	exon	ENSMUSG00000067873	NonProperStrand	9	1	-16.1855
chr11	62418013	62418034	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr6	115757991	115758085	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	7	-12.8414
chr14	31874834	31874859	protein_coding	Pbrm1	exon	ENSMUSG00000042323	ProperStrand	87	chr2	130102052	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-4.6382
chr2	24695172	24695262	protein_coding	Ehmt1	exon	ENSMUSG00000036893	ProperStrand	45	chr9	15119337	15119417	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-5.6707
chr1	181522831	181540574	protein_coding	Cnst	exon	ENSMUSG00000038949	ProperStrand	40	chr16	23110971	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.4886
chr9	15119650	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	chr8	113362470	113362512	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	3	-0.8546
chr9	43919376	43919467	protein_coding	Rnf26	utr3	ENSMUSG00000053128	ProperStrand	30	chr13	46765144	46765160	protein_coding	C78339	exon	ENSMUSG00000069237	NonProperStrand	104	1	-13.6148
chr8	74906683	74908703	protein_coding	Eps15l1	exon	ENSMUSG00000006276	ProperStrand	42	chr11	69481342	69481422	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.8588
chr14	51427119	51427365	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr19	8800355	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	6	-1.0851
chr11	118635774	118635795	protein_coding	Rbfox3	intron	ENSMUSG00000025576	ProperStrand	19	chr19	8798740	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-7.0771
chr1	182837082	182837631	protein_coding	Pycr2	exon	ENSMUSG00000026520	ProperStrand	89	chr1	182261853	182261869	protein_coding	Itpkb	intron	ENSMUSG00000038855	NonProperStrand	27	1	-14.1389
chr15	54432261	54432335	protein_coding	Mal2	utr3	ENSMUSG00000024479	ProperStrand	2	chr16	23111770	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-8.9529
chr9	20900147	20900200	antisense	1700084C06Rik	.	ENSMUSG00000086016	ProperStrand	4	chr4	131908357	131908413	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-6.5415
chrX	34335787	34336839	protein_coding	Slc25a5	exon	ENSMUSG00000016319	ProperStrand	55	chr5	16084302	16084318	protein_coding	Hgf	exon	ENSMUSG00000028864	ProperStrand	2	1	-inf
chrX	90849318	90849817	protein_coding	Pola1	exon	ENSMUSG00000006678	ProperStrand	83	chr17	24665420	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-4.3187
chr4	27869546	27869636	LINE	L1_Mm	L1	chr4L1_Mm27867997	NonProperStrand	1	chr6	110173472	110173552	LINE	L1Md_F2	L1	chr6L1Md_F2110170227	NonProperStrand	1	1	-inf
chr1	196786599	196786615	lincRNA	Gm16897	intron	ENSMUSG00000086469	ProperStrand	12	chr10	39861766	39861785	protein_coding	Slc16a10	exon	ENSMUSG00000019838	NonProperStrand	6	1	-19.9654
chr5	136333034	136333051	protein_coding	Srrm3	utr3	ENSMUSG00000039860	ProperStrand	41	chr13	76193665	76193681	protein_coding	Gpr150	exon	ENSMUSG00000045509	NonProperStrand	63	1	-13.9847
chr8	127768519	127768535	protein_coding	Disc1	intron	ENSMUSG00000043051	ProperStrand	5	chr4	131908357	131908445	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-6.0411
chrX	148702537	148703401	protein_coding	Kdm5c	exon	ENSMUSG00000025332	ProperStrand	139	chr11	4802117	4802140	protein_coding	Thoc5	exon	ENSMUSG00000034274	ProperStrand	325	5	-19.7730
chr8	96556260	96556307	protein_coding	Nudt21	exon	ENSMUSG00000031754	ProperStrand	33	chr15	34370545	34370579	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-4.6811
chr2	24693102	24694234	protein_coding	Ehmt1	exon	ENSMUSG00000036893	ProperStrand	45	chr11	51551344	51551424	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	1	-8.2753
chr10	30338036	30338054	protein_coding	Hint3	exon	ENSMUSG00000019791	ProperStrand	10	chr11	6428075	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-10.9413
chr15	79748650	79748729	protein_coding	Cbx7	utr3	ENSMUSG00000053411	ProperStrand	62	chr17	35089182	35089239	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-5.4211
chr1	71623283	71623301	protein_coding	Atic	exon	ENSMUSG00000026192	ProperStrand	30	chr9	64022854	64022923	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	4	-19.4441
chr17	88120315	88122687	protein_coding	Msh2	exon	ENSMUSG00000024151	ProperStrand	124	chr19	6058505	6058571	protein_coding	Fau	exon	ENSMUSG00000038274	ProperStrand	64	1	-11.7260
chr11	62418044	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	chr13	21262124	21262159	tRNA	tRNA63-LeuAAG	.	322563	ProperStrand	21	3	-17.2075
chr6	35160955	35160971	protein_coding	Nup205	exon	ENSMUSG00000038759	ProperStrand	56	chr17	35299507	35299540	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-4.9104
chr2	181405343	181405359	protein_coding	Sox18	exon	ENSMUSG00000046470	ProperStrand	96	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.4482
chr4	59489825	59489865	protein_coding	Rod1	exon	ENSMUSG00000028382	ProperStrand	52	chr5	108334210	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-5.0970
mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr5	74489214	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	4	-1.1950
chr5	23907913	23907931	protein_coding	Abcb8	exon	ENSMUSG00000028973	NonProperStrand	49	chr7	116664841	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.9031
chr15	102537928	102537953	protein_coding	Calcoco1	exon	ENSMUSG00000023055	ProperStrand	29	chr4	131866155	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-8.3559
chrX	98632599	98632648	protein_coding	Nono	exon	ENSMUSG00000031311	ProperStrand	102	chr5	74489587	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-2.8155
chr6	88040066	88053461	protein_coding	Rpn1	exon	ENSMUSG00000030062	ProperStrand	58	chr16	23110828	23111010	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-0.8495
chr16	23111475	23111507	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr1	34870594	34870637	protein_coding	Fam168b	utr3	ENSMUSG00000037503	ProperStrand	23	1	-10.9523
chr12	52989065	52989163	protein_coding	Heatr5a	exon	ENSMUSG00000035181	ProperStrand	21	chr9	108462953	108462971	protein_coding	Impdh2	intron	ENSMUSG00000062867	ProperStrand	74	1	-15.0205
chr4	36741457	36741473	protein_coding	Lingo2	intron	ENSMUSG00000045083	ProperStrand	17	chr16	23111704	23111759	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.1536
chr1	102076758	102076790	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	chr7	52382784	52382832	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	3	-7.7399
chr13	59686933	59686950	protein_coding	Naa35	intron	ENSMUSG00000021555	NonProperStrand	12	chr1	20796893	20796938	protein_coding	Mcm3	exon	ENSMUSG00000041859	ProperStrand	142	1	-14.8717
chr5	92846898	92848573	protein_coding	Nup54	exon	ENSMUSG00000034826	ProperStrand	16	chr11	6428065	6428165	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	5	-20.1653
chr5	103321552	103321569	protein_coding	Arhgap24	exon	ENSMUSG00000057315	NonProperStrand	21	chr19	8799597	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-8.8770
chr1	177813179	177816849	protein_coding	Exo1	exon	ENSMUSG00000039748	ProperStrand	27	chr17	24857749	24857788	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.7240
chr4	133901937	133903327	protein_coding	Slc30a2	exon	ENSMUSG00000028836	ProperStrand	3	chr4	116826699	116826766	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-13.1299
chr5	119214569	119214642	protein_coding	Med13l	utr3	ENSMUSG00000018076	ProperStrand	226	chr19	8800361	8800451	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-1.3294
chr7	151694040	151694056	protein_coding	Ppfia1	exon	ENSMUSG00000037519	ProperStrand	32	chr11	69483135	69483235	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.5740
chr5	138240728	138240753	protein_coding-noncoding	Zcwpw1	utr5	ENSMUSG00000037108	ProperStrand	1	chr18	35714145	35714235	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-inf
chr3	96001171	96001187	protein_coding	Bola1	exon	ENSMUSG00000015943	NonProperStrand	2	chr4	131908686	131908788	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-8.0336
chr11	70210417	70210545	protein_coding	Pelp1	exon	ENSMUSG00000018921	ProperStrand	64	chr11	97642985	97643075	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	7	-16.7198
chr9	78023109	78023147	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr8	113570964	113570996	protein_coding	Aars	exon	ENSMUSG00000031960	ProperStrand	355	1	-2.5562
chr19	9947009	9947099	protein_coding	Incenp	utr3	ENSMUSG00000024660	ProperStrand	111	chr1	46078109	46078128	protein_coding	Gm4776	utr3	ENSMUSG00000044457	NonProperStrand	24	1	-13.9318
chr11	116541777	116541852	protein_coding-noncoding	St6galnac2	utr3	ENSMUSG00000057286	NonProperStrand	2	chr10	23505152	23505175	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-inf
chr1	92689614	92689630	protein_coding	Col6a3	exon	ENSMUSG00000048126	ProperStrand	79	chr17	35089181	35089232	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-4.9507
chr13	38075351	38077203	protein_coding	Ssr1	exon	ENSMUSG00000021427	ProperStrand	65	chrX	71517838	71517928	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-6.3871
chr4	40124888	40124978	protein_coding	Aco1	exon	ENSMUSG00000028405	ProperStrand	25	chr4	131865867	131865934	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.2649
chr9	70960076	70960093	protein_coding	Aqp9	exon	ENSMUSG00000032204	NonProperStrand	118	chr5	121655015	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	4	-9.0784
chr7	3293289	3296809	protein_coding	Myadm	utr5	ENSMUSG00000068566	ProperStrand	31	chr4	131908817	131908897	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-6.0994
chr15	82980089	82980225	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr1	162967488	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	8	-1.8579
chr4	55431686	55431705	lincRNA	Gm12505	exon	ENSMUSG00000087070	ProperStrand	447	chr5	63121761	63121778	protein_coding	Arap2	exon	ENSMUSG00000037999	NonProperStrand	3	1	-15.6839
chr14	47930278	47930368	protein_coding	Mapk1ip1l	exon	ENSMUSG00000021840	ProperStrand	34	chr5	53207135	53207454	protein_coding	Zcchc4	exon	ENSMUSG00000029179	ProperStrand	15	2	-19.0516
chr4	75636628	75636645	protein_coding	Ptprd	intron	ENSMUSG00000028399	NonProperStrand	29	chr4	130305550	130305619	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	1	-11.3785
chr3	88952697	88952713	protein_coding	Hcn3	exon	ENSMUSG00000028051	ProperStrand	40	chr18	33954815	33954890	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-4.2661
chr4	100823201	100823239	protein_coding	Raver2	utr3	ENSMUSG00000035275	ProperStrand	16	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.9771
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	143648714	143648733	protein_coding	Fbxl18	exon	ENSMUSG00000066640	ProperStrand	64	1	-4.3396
chr5	37667536	37667552	protein_coding	Crmp1	exon	ENSMUSG00000029121	ProperStrand	85	chr7	52381719	52381758	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-6.8816
chr11	3401595	3401611	protein_coding	Inpp5j	exon	ENSMUSG00000034570	NonProperStrand	2	chr17	35089181	35089228	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-12.9029
chr12	24334624	24334724	DNA	MER63C	AcHobo	chr12MER63C24334431	NonProperStrand	7	chr4	131908236	131908293	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-5.3201
chr9	15119335	15119426	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	chr7	67123729	67123759	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	19	-inf
chr6	51415202	51416163	protein_coding	Hnrnpa2b1	exon	ENSMUSG00000004980	ProperStrand	166	chr2	3201639	3222112	protein_coding	Nmt2	exon	ENSMUSG00000026643	ProperStrand	21	1	-13.3981
chr18	80637716	80637751	protein_coding	Ctdp1	intron	ENSMUSG00000033323	ProperStrand	69	chr15	79908928	79908984	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	2	-8.5475
chr19	8800354	8800409	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	chr17	26360495	26360590	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	1	-0.9223
chr5	33370368	33370389	protein_coding	Ywhah	utr3	ENSMUSG00000018965	ProperStrand	81	chr8	32271244	32272241	protein_coding	Mak16	exon	ENSMUSG00000031578	ProperStrand	26	1	-14.3980
chr12	89253997	89254087	LINE	L1Md_F2	L1	chr12L1Md_F289251706	NonProperStrand	1	chr7	54443855	54443945	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	1	-inf
chr7	117189863	117189954	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr4	131908686	131908899	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	48	-2.9876
chr11	106116106	106116693	protein_coding	Ftsj3	exon	ENSMUSG00000020706	ProperStrand	64	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.1593
chr12	68768930	68769010	LINE	L1Md_F2	L1	chr12L1Md_F268768613	NonProperStrand	12	chr9	102652633	102652723	LINE	L2b	L2	chr9L2b102652607	NonProperStrand	1	1	-inf
chr7	101143794	101143812	LINE	Lx5	L1	chr7Lx5101143426	NonProperStrand	12	chr11	62164911	62165011	protein_coding	Ncor1	exon	ENSMUSG00000018501	ProperStrand	132	1	-15.0155
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr10	90581034	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-1.0812
chr12	25396638	25397547	protein_coding	Rrm2	exon	ENSMUSG00000020649	ProperStrand	65	chr11	83302470	83310783	protein_coding	Taf15	exon	ENSMUSG00000020680	ProperStrand	60	6	-inf
chr7	133940198	133940370	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	chr7	52378417	52378460	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	2	-6.1927
chr7	88038579	88038659	protein_coding	Wdr73	exon	ENSMUSG00000025722	ProperStrand	6	chr3	65758917	65759007	protein_coding	Ccnl1	intron	ENSMUSG00000027829	ProperStrand	29	1	-19.1789
chr9	57385425	57385441	protein_coding	2310046O06Rik	utr5	ENSMUSG00000032305	ProperStrand	135	chr14	31984996	31985013	protein_coding	Tnnc1	intron	ENSMUSG00000091898	ProperStrand	9	1	-15.5846
chr2	26493393	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr4	140121137	140121153	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	1	-4.6036
chr5	145884498	145884556	protein_coding	Arpc1b	exon	ENSMUSG00000029622	ProperStrand	17	chr16	23110842	23110873	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-5.4260
chr15	98481450	98481681	protein_coding	Ddx23	exon	ENSMUSG00000003360	ProperStrand	63	chr16	23111371	23111394	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-2.3112
chr7	52222191	52222207	protein_coding	Cpt1c	exon	ENSMUSG00000007783	NonProperStrand	11	chr4	131908753	131908786	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.1344
chr4	132752397	132752431	protein_coding	Wasf2	utr3	ENSMUSG00000028868	ProperStrand	56	chr6	115758049	115758132	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-5.6070
chr3	47815519	47815609	LINE	L1_Mus3	L1	chr3L1_Mus347814422	ProperStrand	1	chrX	124646543	124646633	LINE	L1Md_F2	L1	chrXL1Md_F2124645630	ProperStrand	1	1	-inf
chr2	32162200	32162216	protein_coding	Golga2	utr3	ENSMUSG00000002546	NonProperStrand	35	chr16	23110526	23110557	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.4208
chr14	87659491	87659512	LTR	MTEa	MaLR	chr14MTEa87659331	NonProperStrand	83	chr3	19118179	19118195	protein_coding	Mtfr1	exon	ENSMUSG00000027601	ProperStrand	13	1	-15.7537
chr11	100232216	100232297	protein_coding	Jup	utr3	ENSMUSG00000001552	ProperStrand	123	chr9	40612269	40612359	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	81	-inf
chr19	44097515	44097536	protein_coding	Cyp2c44	intron	ENSMUSG00000025197	NonProperStrand	21	chr11	69483189	69483279	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.3745
chr6	116587840	116587857	protein_coding	Rassf4	utr3	ENSMUSG00000042129	ProperStrand	20	chr7	116663649	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.5385
chr10	23506278	23506348	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	chr11	77995191	77995236	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	16	-20.5739
chr13	101541068	101541087	protein_coding	Cenph	intron	ENSMUSG00000045273	NonProperStrand	45	chr16	23111390	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.6772
chr6	83443969	83444079	protein_coding	Dguok	intron	ENSMUSG00000014554	ProperStrand	10	chr3	123210854	123210877	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	9	-22.2449
chr3	101264563	101264631	protein_coding	Igsf3	utr3	ENSMUSG00000042035	ProperStrand	73	chr19	8798525	8798553	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	5	-18.8040
chr8	46127326	46127584	protein_coding	Fat1	exon	ENSMUSG00000070047	ProperStrand	306	chr2	26768416	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	2	-4.4997
chr6	88456186	88456739	protein_coding	Sec61a1	exon	ENSMUSG00000030082	ProperStrand	46	chr2	26494752	26494842	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.5925
chr3	90310036	90310074	protein_coding	2500003M10Rik	exon	ENSMUSG00000001017	ProperStrand	28	chr4	131908689	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.4067
chr11	57944204	57948287	protein_coding	Gemin5	exon	ENSMUSG00000037275	ProperStrand	33	chr16	23110555	23110580	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-8.8340
mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr7	152106636	152106652	protein_coding	Oraov1	utr3	ENSMUSG00000031072	ProperStrand	4	1	-11.5429
chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	chr8	98269959	98269996	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-3.0121
chr2	158185590	158185666	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr1	162966214	162966269	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-1.3279
chr12	3968611	3968627	protein_coding	Efr3b	exon	ENSMUSG00000020658	ProperStrand	142	chr9	24549590	24549635	protein_coding	Tbx20	intron	ENSMUSG00000031965	NonProperStrand	110	1	-10.3670
chr6	105943731	105943747	protein_coding	Cntn4	intron	ENSMUSG00000064293	NonProperStrand	14	chr4	131865878	131865978	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-10.7509
chr9	45198928	45199653	protein_coding	Fxyd6	exon	ENSMUSG00000066705	NonProperStrand	108	chr3	68889149	68889225	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-2.2328
chr11	53228911	53228946	protein_coding	Aff4	exon	ENSMUSG00000049470	ProperStrand	94	chr11	62416615	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-4.3040
chr5	34234244	34234261	protein_coding	Whsc1	utr5	ENSMUSG00000057406	ProperStrand	409	chr3	104627161	104627294	protein_coding	Capza1	utr3	ENSMUSG00000070372	ProperStrand	42	1	-10.1874
chr8	46127235	46127325	protein_coding	Fat1	exon	ENSMUSG00000070047	ProperStrand	306	chr5	108334205	108334285	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-1.9009
chr17	47396016	47396116	protein_coding	Trerf1	intron	ENSMUSG00000064043	ProperStrand	56	chr1	162966830	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	2	-10.3579
chr17	45708398	45708445	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr13	46765144	46765160	protein_coding	C78339	exon	ENSMUSG00000069237	NonProperStrand	104	1	-5.6471
chr10	59414208	59414298	protein_coding	Ddit4	utr5	ENSMUSG00000020108	ProperStrand	49	chr10	23505180	23505260	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.5211
chr15	101055087	101055104	protein_coding	Grasp	intron	ENSMUSG00000000531	NonProperStrand	3	chr14	56159294	56159311	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	1	-17.5987
chr7	26472435	26472451	protein_coding	Tgfb1	utr5	ENSMUSG00000002603	NonProperStrand	154	chr7	106627456	106627794	protein_coding	Rps3	utr3	ENSMUSG00000030744	ProperStrand	159	1	-9.4673
chr6	86619040	86619056	protein_coding	Mxd1	utr5	ENSMUSG00000001156	NonProperStrand	40	chr11	68886974	68887037	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	2	-8.1408
chr4	117540912	117540966	protein_coding	Slc6a9	utr3	ENSMUSG00000028542	ProperStrand	6	chr16	23111777	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-15.1980
chr7	136800631	136800649	SINE	RSINE1	B4	chr7RSINE1136800606	ProperStrand	216	chr11	6428088	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.1387
chr7	20323615	20323705	protein_coding	Pvrl2	exon	ENSMUSG00000062300	ProperStrand	110	chr11	97642994	97643074	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.5051
chr1	132993987	132994071	protein_coding	Mapkapk2	exon	ENSMUSG00000016528	ProperStrand	9	chr8	66523337	66523354	protein_coding	Tll1	intron	ENSMUSG00000053626	NonProperStrand	18	1	-18.6028
chr13	51245384	51245400	protein_coding	Spin1	utr3	ENSMUSG00000021395	NonProperStrand	5	chr10	23505559	23505626	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-12.7048
chr5	77395291	77395315	protein_coding	Paics	exon	ENSMUSG00000029247	ProperStrand	78	chrX	149828130	149828146	protein_coding	Klf8	utr3	ENSMUSG00000041649	NonProperStrand	107	1	-11.6240
chr14	59845150	59845193	protein_coding	Rcbtb1	exon	ENSMUSG00000035469	ProperStrand	39	chr2	130101991	130102085	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	2	-10.0810
chr3	90016935	90016953	protein_coding	Rps27	exon	ENSMUSG00000090733	ProperStrand	40	chr16	23110531	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.1765
chr1	141997466	141997484	protein_coding	Cfh	exon	ENSMUSG00000026365	ProperStrand	1	chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	1	-inf
chr4	136705440	136705530	LINE	L1MEc	L1	chr4L1MEc136705385	NonProperStrand	1	chr4	136705263	136705353	Simple_repeat	(TG)n	Simple_repeat	chr4(TG)n136705062	ProperStrand	1	1	-inf
chr14	21480567	21480585	protein_coding	Synpo2l	exon	ENSMUSG00000039376	NonProperStrand	1	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-inf
chr10	21572661	21572751	SINE	B4A	B4	chr10B4A21572622	NonProperStrand	1	chr10	21572479	21572569	SINE	ID	ID	chr10ID21572504	NonProperStrand	1	1	-inf
chr2	164521970	164521987	SINE	B4A	B4	chr2B4A164521909	ProperStrand	41	chr5	121655099	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.4679
chr14	47942013	47942103	protein_coding	Mapk1ip1l	utr3	ENSMUSG00000021840	ProperStrand	34	chr7	116663634	116663714	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.5282
chr7	54443657	54443688	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	chr4	131908357	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-0.9671
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr7	149170855	149171340	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	1	-4.3705
chr4	40691067	40691167	protein_coding	Smu1	exon	ENSMUSG00000028409	ProperStrand	23	chr11	69483173	69483248	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.1990
chr1	88247743	88247875	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	chr6	71832550	71832689	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	7	-1.6208
chr2	128807549	128807639	protein_coding	Zc3h6	intron	ENSMUSG00000042851	NonProperStrand	1	chr2	128805871	128805961	protein_coding	Zc3h6	intron	ENSMUSG00000042851	ProperStrand	8	1	-inf
mmu-miR-6240	4	23	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr18	83156768	83156784	protein_coding	Zfp516	exon	ENSMUSG00000058881	NonProperStrand	15	1	-8.6903
chr11	100378171	100380443	protein_coding	Acly	exon	ENSMUSG00000020917	ProperStrand	183	chr16	21568535	21575046	protein_coding	Vps8	exon	ENSMUSG00000033653	NonProperStrand	14	1	-14.0465
chr8	124065754	124065776	protein_coding	1700018B08Rik	utr5	ENSMUSG00000031809	ProperStrand	1	chr3	108357641	108357663	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-inf
chr11	75578667	75578724	protein_coding	Ywhae	utr3	ENSMUSG00000020849	ProperStrand	176	chr17	47747423	47747440	protein_coding	Bysl	intron	ENSMUSG00000023988	NonProperStrand	1	1	-inf
chr10	127521199	127521271	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	chr11	69483168	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	11	-5.7655
chr10	126827436	126837198	protein_coding	R3hdm2	utr5	ENSMUSG00000025404	ProperStrand	33	chr19	38263071	38263110	protein_coding	5730455O13Rik	utr3	ENSMUSG00000054237	ProperStrand	4	1	-19.4693
chr2	27137462	27137478	protein_coding	Vav2	exon	ENSMUSG00000009621	NonProperStrand	31	chr11	6428087	6428156	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.4276
chr15	98356817	98356900	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	chr17	24856650	24856751	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	3	-4.1565
chr6	88207892	88207947	protein_coding	Eefsec	utr3	ENSMUSG00000033216	ProperStrand	23	chr7	126059091	126059107	protein_coding	Iqck	exon	ENSMUSG00000073856	NonProperStrand	4	1	-19.3474
chr3	156224612	156224628	lincRNA	4930570G19Rik	exon	ENSMUSG00000085084	ProperStrand	326	chr14	31384372	31384409	protein_coding	Tkt	exon	ENSMUSG00000021957	ProperStrand	160	1	-7.9608
chr5	115782135	115782225	protein_coding	Srsf9	exon	ENSMUSG00000029538	ProperStrand	19	chr12	88778665	88778745	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-8.8092
chr6	128324512	128324529	protein_coding	Foxm1	utr3	ENSMUSG00000001517	NonProperStrand	66	chr10	23505258	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.1060
chr8	107773772	107773794	protein_coding	D230025D16Rik	intron	ENSMUSG00000031889	ProperStrand	20	chr10	23505149	23505218	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.0137
chr14	66093252	66093268	LTR	MLT1A1	MaLR	chr14MLT1A166093179	ProperStrand	31	chr18	35716763	35716825	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.3259
chr17	36116767	36116785	protein_coding	Prr3	utr5	ENSMUSG00000038500	ProperStrand	6	chr19	8963027	8963111	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-16.0788
chr17	75007668	75007757	protein_coding	Birc6	intron	ENSMUSG00000024073	ProperStrand	110	chr4	131908236	131908274	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-3.5081
chr8	123103581	123103655	protein_coding	Gse1	utr3	ENSMUSG00000031822	ProperStrand	97	chr8	98269959	98270014	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	3	-10.9789
chr2	91768132	91768148	protein_coding	Chrm4	exon	ENSMUSG00000040495	NonProperStrand	55	chr4	131908772	131908808	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.3443
chr7	52958453	52958469	protein_coding	Car11	exon	ENSMUSG00000003273	NonProperStrand	250	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-1.2372
chr4	155550571	155550621	protein_coding	Agrn	exon	ENSMUSG00000041936	ProperStrand	175	chr11	106362668	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-5.2977
chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	chr14	31827478	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-1.2358
chr18	57412089	57412107	protein_coding	Megf10	intron	ENSMUSG00000024593	NonProperStrand	25	chr11	77995189	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-7.9320
chr3	68877717	68877816	protein_coding	Kpna4	utr3	ENSMUSG00000027782	ProperStrand	21	chr10	62285376	62285446	protein_coding	Tet1	exon	ENSMUSG00000047146	ProperStrand	286	1	-12.3114
chr6	137512752	137512814	protein_coding	Eps8	intron	ENSMUSG00000015766	ProperStrand	14	chr16	23111392	23111482	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.7143
chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	chr11	106934943	106934967	protein_coding	Bptf	exon	ENSMUSG00000040481	ProperStrand	70	1	-7.8014
chr3	31347216	31347240	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int31346640	NonProperStrand	2	chr8	126729316	126729332	protein_coding	Gm20388	intron	ENSMUSG00000092329	NonProperStrand	203	1	-18.3960
chr7	140951350	140951419	protein_coding	Dhx32	utr5	ENSMUSG00000030986	ProperStrand	100	chr4	131908357	131908440	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-3.8682
chr17	6317470	6317489	lincRNA	Gm17692	intron	ENSMUSG00000091795	ProperStrand	4	chr16	23110828	23110885	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.6489
chr9	14607322	14609818	protein_coding	Mre11a	exon	ENSMUSG00000031928	ProperStrand	20	chr4	131865856	131865936	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-12.4569
chr3	121160032	121160060	protein_coding	Cnn3	exon	ENSMUSG00000053931	ProperStrand	77	chr17	36000485	36000501	protein_coding	Nrm	exon	ENSMUSG00000059791	ProperStrand	253	1	-9.9270
chr1	120807421	120807511	protein_coding	Gli2	intron	ENSMUSG00000048402	ProperStrand	148	chr11	69481398	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-1.6823
chr3	52388277	52388294	SINE	B4A	B4	chr3B4A52388218	ProperStrand	169	chr11	69483136	69483265	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-0.9136
chr9	21823257	21823273	protein_coding	Elavl3	exon	ENSMUSG00000003410	NonProperStrand	137	chr11	102264293	102264318	protein_coding	Slc25a39	utr3	ENSMUSG00000018677	ProperStrand	35	1	-12.7465
chr6	115757991	115758091	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr7	52381719	52381782	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	3	-2.3979
chr14	33153123	33153184	protein_coding	Ogdhl	exon	ENSMUSG00000021913	ProperStrand	182	chr5	31209835	31209873	protein_coding	Ost4	exon	ENSMUSG00000038803	ProperStrand	8	2	-19.3269
chr9	50816824	50816841	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	chr2	21005618	21005635	pseudogene	Gm13377	.	ENSMUSG00000086821	ProperStrand	15	1	-14.6295
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr2	129627400	129627416	protein_coding	Stk35	exon	ENSMUSG00000037885	NonProperStrand	10	1	-11.6319
chr17	28466469	28466526	protein_coding-noncoding	Rpl10a	utr5	ENSMUSG00000037805	ProperStrand	14	chr11	69481333	69481375	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-9.8612
chr14	15572354	15572371	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr9	120039583	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.6169
chr4	114741487	114741504	protein_coding	Tal1	utr3	ENSMUSG00000028717	NonProperStrand	69	chr4	122968610	122968710	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-6.0053
chr10	118676994	118677023	protein_coding	Cand1	utr5	ENSMUSG00000020114	ProperStrand	76	chr17	25283313	25283329	protein_coding	Clcn7	exon	ENSMUSG00000036636	NonProperStrand	34	1	-13.9802
chr1	134524904	134524982	protein_coding	Nfasc	intron	ENSMUSG00000026442	ProperStrand	25	chr10	110918669	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-5.1172
chr8	120634113	120634132	LTR	MTC	MaLR	chr8MTC120634057	ProperStrand	1	chr17	35299507	35299642	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-inf
chr9	95799506	95801501	protein_coding	Atr	exon	ENSMUSG00000032409	ProperStrand	44	chr13	8756716	8766308	protein_coding	Adarb2	utr3	ENSMUSG00000052551	ProperStrand	292	3	-inf
chr18	10052131	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr17	66468411	66468427	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	1	-5.3894
chr12	110874222	110874290	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	chr5	130300444	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-1.4229
chr11	98546839	98546855	protein_coding	Psmd3	exon	ENSMUSG00000017221	ProperStrand	51	chr5	92485086	92485216	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	1	-9.0655
chr2	127317007	127317024	protein_coding	Kcnip3	intron	ENSMUSG00000079056	NonProperStrand	18	chr4	131865866	131865914	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-6.6051
chr4	147589546	147589563	DNA	MER91B	Tip100	chr4MER91B147589497	NonProperStrand	9	chr1	162967490	162967511	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-7.2161
chr5	123350184	123350207	protein_coding	Kdm2b	exon	ENSMUSG00000029475	ProperStrand	30	chr18	35714144	35714263	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.7548
chr15	18774742	18774758	protein_coding	Cdh10	intron	ENSMUSG00000022321	NonProperStrand	9	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-11.6174
chr1	194943796	194943867	protein_coding	Diexf	exon	ENSMUSG00000016181	ProperStrand	3	chr16	23111727	23111817	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-7.8619
chr9	92493449	92493521	protein_coding	Plod2	exon	ENSMUSG00000032374	ProperStrand	52	chr16	23111725	23111779	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.1343
chr9	56266647	56266665	protein_coding	Hmg20a	utr5	ENSMUSG00000032329	ProperStrand	87	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.6168
chr6	99583139	99583156	protein_coding	Eif4e3	intron	ENSMUSG00000030068	NonProperStrand	15	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-12.1874
chr1	75182620	75182805	protein_coding	Atg9a	exon	ENSMUSG00000033124	ProperStrand	17	chr7	109281147	109281192	protein_coding	Nup98	exon	ENSMUSG00000063550	ProperStrand	100	1	-14.8677
chr16	91656031	91656095	protein_coding	Son	exon	ENSMUSG00000022961	ProperStrand	59	chr11	6428054	6428154	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.2227
chr1	157753776	157756427	protein_coding	Cep350	exon	ENSMUSG00000033671	ProperStrand	48	chr10	23505152	23505226	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.5517
chr9	74868761	74868803	protein_coding	BC031353	intron	ENSMUSG00000034858	ProperStrand	14	chr9	120038547	120038588	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-9.5947
chr2	126967012	126967102	protein_coding	Itpripl1	utr3	ENSMUSG00000074825	ProperStrand	22	chr4	131908716	131908796	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.8292
chr2	79132657	79132674	protein_coding-noncoding	Itga4	utr5	ENSMUSG00000027009	NonProperStrand	118	chr7	134461671	134461730	protein_coding	Itgal	intron	ENSMUSG00000030830	ProperStrand	38	1	-12.8777
chr12	73313178	73313223	protein_coding	Rtn1	utr3	ENSMUSG00000021087	ProperStrand	13	chr10	23505149	23505211	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.8218
chr7	52381719	52381736	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	chr4	41158542	41158608	snoRNA	ENSMUSG00000089308_SNORD121A	.	ENSMUSG00000089308	ProperStrand	209	1	-5.1199
chr10	74524205	74524221	protein_coding	Bcr	exon	ENSMUSG00000009681	NonProperStrand	23	chr7	29997743	29997760	protein_coding	Catsperg1	intron	ENSMUSG00000049676	ProperStrand	21	1	-17.1449
chr3	146169067	146169157	protein_coding	Dnase2b	intron	ENSMUSG00000028185	ProperStrand	14	chr16	23111697	23111778	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	8	-inf
chr14	24953428	24953488	protein_coding	Dlg5	utr3	ENSMUSG00000021782	ProperStrand	46	chr7	11486362	11486378	protein_coding	Zscan4b	exon	ENSMUSG00000091643	ProperStrand	2	1	-inf
chr6	131315205	131315232	protein_coding	Csda	utr3	ENSMUSG00000030189	ProperStrand	86	chr17	13112549	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-3.8978
chr10	126636836	126636852	lincRNA	F420014N23Rik	intron	ENSMUSG00000086597	ProperStrand	2	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	1	-14.4896
chr1	16091850	16091896	protein_coding	Rpl7	exon	ENSMUSG00000043716	ProperStrand	93	chr18	35714216	35714266	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	5	-12.1261
chr11	60606536	60608400	protein_coding	Shmt1	exon	ENSMUSG00000020534	ProperStrand	60	chr19	8798757	8798798	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	2	-7.9455
chr9	15193566	15193585	LTR	ORR1E	MaLR	chr9ORR1E15193349	ProperStrand	1	chr8	80041484	80041501	protein_coding	Arhgap10	intron	ENSMUSG00000037148	ProperStrand	58	1	-inf
chr4	131865381	131865460	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	chr12	60774058	60774110	snoRNA	ENSMUSG00000077603_SNORA3	.	ENSMUSG00000077603	ProperStrand	185	2	-3.6324
chr5	90679502	90681934	protein_coding	Ankrd17	exon	ENSMUSG00000055204	ProperStrand	77	chr19	8800355	8800435	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-3.0763
chr10	127795420	127795486	protein_coding	Cs	exon	ENSMUSG00000005683	ProperStrand	63	chr10	110918674	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-5.7433
chr7	108971290	108971306	protein_coding	Inppl1	utr3	ENSMUSG00000032737	ProperStrand	272	chr15	102134519	102134560	protein_coding	Espl1	exon	ENSMUSG00000058290	ProperStrand	172	1	-8.1766
chr8	122037877	122039530	protein_coding	Mbtps1	utr3	ENSMUSG00000031835	ProperStrand	81	chr2	160772796	160772812	protein_coding	Chd6	utr3	ENSMUSG00000057133	ProperStrand	104	1	-11.6056
chr5	29133647	29133666	lincRNA	9530036O11Rik	intron	ENSMUSG00000086663	NonProperStrand	6	chr1	155067351	155067401	protein_coding	Lamc1	utr3	ENSMUSG00000026478	ProperStrand	239	1	-15.2948
chr11	97889190	97889220	protein_coding	Rpl19	exon	ENSMUSG00000017404	ProperStrand	120	chr7	30231508	30231594	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	3	-16.7419
chr2	147009103	147009122	protein_coding	Nkx2-2	utr3	ENSMUSG00000027434	NonProperStrand	84	chr11	69483194	69483270	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.8963
chr4	43505668	43505931	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	2	-0.8297
chr6	117820747	117820847	protein_coding	Zfp239	utr5	ENSMUSG00000042097	ProperStrand	6	chr5	130300498	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-7.0019
chr11	100442920	100442987	protein_coding	Cnp	utr3	ENSMUSG00000006782	ProperStrand	1	chr11	77995189	77995251	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-inf
chr1	180266250	180267144	protein_coding	Hnrnpu	exon	ENSMUSG00000039630	ProperStrand	286	chr6	115757997	115758044	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-2.5693
chr1	31783335	31783425	LTR	IAPLTR2b	ERVK	chr1IAPLTR2b31783265	ProperStrand	1	chr16	36364262	36364352	protein_coding-noncoding	BC100530	utr3	ENSMUSG00000071561	ProperStrand	1	1	-inf
chr11	120459483	120459499	protein_coding	Alyref	exon	ENSMUSG00000025134	ProperStrand	53	chr6	85418155	85418193	protein_coding	Cct7	exon	ENSMUSG00000030007	ProperStrand	173	1	-11.4388
chr12	4642404	4642421	protein_coding	Itsn2	exon	ENSMUSG00000020640	NonProperStrand	3	chr11	6428065	6428087	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-9.3720
chr6	83111671	83111687	protein_coding	1700003E16Rik	exon	ENSMUSG00000030030	ProperStrand	352	chr9	50816824	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	1	-8.2681
chr11	94418583	94418638	protein_coding	Acsf2	utr3	ENSMUSG00000076435	ProperStrand	34	chr5	121655049	121655123	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.8293
chr18	44988692	44988782	protein_coding	Ythdc2	intron	ENSMUSG00000034653	ProperStrand	9	chr4	131908814	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.5343
chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr7	120098784	120098801	pseudogene	Rassf10	.	ENSMUSG00000048962	ProperStrand	5	2	-18.6830
chr17	23955820	23955838	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	chr5	74489583	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	10	-22.0067
chrX	83547356	83547372	protein_coding	Mageb4	intron	ENSMUSG00000035427	NonProperStrand	191	chr9	6954606	6954628	protein_coding	Dync2h1	intron	ENSMUSG00000047193	ProperStrand	40	1	-11.8083
chr2	37245125	37245199	protein_coding	Rc3h2	exon	ENSMUSG00000075376	ProperStrand	35	chr16	23111794	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-7.3216
chr13	42396835	42396851	protein_coding	Edn1	utr5	ENSMUSG00000021367	NonProperStrand	8	chr17	13112450	13112487	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-8.6392
chr7	136800631	136800649	SINE	RSINE1	B4	chr7RSINE1136800606	ProperStrand	216	chr10	12642375	12642401	lincRNA	B230208H11Rik	exon	ENSMUSG00000085233	ProperStrand	21	1	-12.8728
chr8	113692567	113692622	protein_coding	Glg1	exon	ENSMUSG00000003316	ProperStrand	83	chr7	117189983	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.7523
mmu-miR-6240	4	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr12	114290175	114290191	protein_coding	Pacs2	intron	ENSMUSG00000021143	NonProperStrand	302	1	-2.8593
chr11	55311183	55311433	protein_coding	G3bp1	exon	ENSMUSG00000018583	ProperStrand	106	chr1	162967504	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-2.4647
chr18	10052133	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr13	21845956	21846104	protein_coding	Hist1h2bn	intron	ENSMUSG00000069271	ProperStrand	5	1	-13.9632
chr3	132554382	132554398	protein_coding	Npnt	exon	ENSMUSG00000040998	ProperStrand	14	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-10.6922
chr2	90689811	90689844	protein_coding	Mtch2	exon	ENSMUSG00000027282	ProperStrand	12	chr6	143018259	143018306	protein_coding	5730419I09Rik	intron	ENSMUSG00000030279	ProperStrand	81	1	-16.0106
chr2	90235291	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	95198374	95198391	protein_coding	Irx6	utr5	ENSMUSG00000031738	ProperStrand	16	1	-7.0757
chr7	140955174	140955198	protein_coding	Dhx32	intron	ENSMUSG00000030986	ProperStrand	100	chr5	130295414	130295547	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-4.2670
chr5	116004114	116004214	protein_coding	Pxn	utr3	ENSMUSG00000029528	ProperStrand	171	chr1	39605591	39605632	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-5.2832
chr11	60370927	60370943	protein_coding	Alkbh5	utr3	ENSMUSG00000042650	ProperStrand	203	chr7	4698279	4698356	protein_coding	Suv420h2	exon	ENSMUSG00000059851	ProperStrand	60	1	-10.8688
chr2	112102702	112102735	protein_coding	Nop10	utr3	ENSMUSG00000027133	ProperStrand	10	chr2	119609478	119609525	protein_coding	Rpap1	exon	ENSMUSG00000034032	ProperStrand	96	1	-16.0355
chr1	194571789	194571846	snRNA	ENSMUSG00000064881_U5	.	ENSMUSG00000064881	ProperStrand	187	chr9	120038564	120038672	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	6	-8.9680
chr11	69481333	69481474	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	chr10	39978273	39978478	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	17	-0.9357
chr5	92631464	92631487	protein_coding	Uso1	utr3	ENSMUSG00000029407	ProperStrand	17	chr19	4041468	4041688	protein_coding	Gstp2	exon	ENSMUSG00000038155	ProperStrand	8	2	-19.8197
chr6	51155218	51155308	SINE	B4A	B4	chr6B4A51155238	NonProperStrand	1	chr17	26360446	26360526	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	1	-inf
chr11	116535465	116535532	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr8	24169016	24169033	protein_coding	Ank1	utr5	ENSMUSG00000031543	ProperStrand	47	2	-10.3595
chr4	43505747	43505827	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr2	35170478	35170568	protein_coding	Stom	utr3	ENSMUSG00000026880	ProperStrand	15	1	-5.7264
chr6	88435849	88435865	protein_coding	Ruvbl1	exon	ENSMUSG00000030079	NonProperStrand	54	chr15	98356870	98356914	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	1	-7.9645
chr8	112387973	112387989	antisense	Gm17344	.	ENSMUSG00000078143	NonProperStrand	100	chr10	90432660	90432676	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	1	-9.5935
chr14	57143250	57143268	protein_coding	Rnf17	intron	ENSMUSG00000000365	NonProperStrand	4	chr11	62416978	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-11.6858
chr7	134929083	134929124	protein_coding	Setd1a	exon	ENSMUSG00000042308	ProperStrand	58	chr2	158185530	158185622	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-6.5531
chr4	132597112	132597168	protein_coding	Ahdc1	intron	ENSMUSG00000037692	ProperStrand	100	chr2	26768402	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	4	-14.5397
chr2	90235299	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr3	127599270	127599291	Simple_repeat	(CGGGGG)n	Simple_repeat	chr3(CGGGGG)n127599270	ProperStrand	1	1	-inf
chr9	66334053	66334747	protein_coding	Herc1	exon	ENSMUSG00000038664	NonProperStrand	35	chr9	120037933	120038049	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-5.7569
chr19	54001776	54001820	protein_coding	Pdcd4	exon	ENSMUSG00000024975	ProperStrand	21	chr16	23111391	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.9586
chr10	77512651	77512839	protein_coding	Dnmt3l	utr5	ENSMUSG00000000730	ProperStrand	37	chr7	117190019	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.2355
chr12	16833190	16833280	protein_coding	E2f6	utr3	ENSMUSG00000057469	ProperStrand	6	chr4	131908811	131908891	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.3738
chr19	20858899	20858916	protein_coding	Tmc1	utr3	ENSMUSG00000024749	NonProperStrand	8	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.4974
chr11	79997400	79997417	protein_coding	Rnf135	utr5	ENSMUSG00000020707	NonProperStrand	18	chr5	121655032	121655126	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-9.9531
chr2	105537177	105537193	protein_coding	Pax6	utr3	ENSMUSG00000027168	ProperStrand	13	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-13.7260
chr15	8300679	8300715	protein_coding	Nipbl	exon	ENSMUSG00000022141	ProperStrand	45	chr15	34370585	34370676	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	7	-inf
chr15	34604857	34604877	protein_coding	Nipal2	intron	ENSMUSG00000038879	NonProperStrand	3	chr6	148303900	148303972	protein_coding	Rps4y2	exon	ENSMUSG00000063171	ProperStrand	47	1	-inf
chr2	90235294	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	113101441	113101481	protein_coding	Setd5	utr3	ENSMUSG00000034269	ProperStrand	162	1	-2.6439
chr6	148870086	148871159	protein_coding	Fam60a	utr3	ENSMUSG00000039985	ProperStrand	68	chr16	23110913	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-2.8062
chr4	138638750	138638840	protein_coding	Nbl1	utr3	ENSMUSG00000041120	ProperStrand	2	chr17	24857717	24857797	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-9.4368
chr6	134961660	134961676	protein_coding	Ddx47	exon	ENSMUSG00000030204	ProperStrand	11	chrX	11635286	11635304	protein_coding	Bcor	exon	ENSMUSG00000040363	ProperStrand	20	1	-18.9599
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	66521957	66521973	protein_coding	Unc80	intron	ENSMUSG00000055567	NonProperStrand	212	2	-3.9091
chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	chr1	162966813	162966843	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-2.6644
chr7	112882669	112882730	protein_coding	Rrp8	exon	ENSMUSG00000030888	ProperStrand	8	chr3	144748059	144749264	protein_coding	Clca5	exon	ENSMUSG00000036960	ProperStrand	86	1	-16.7327
chr15	80082327	80082347	protein_coding	Smcr7l	utr3	ENSMUSG00000022412	ProperStrand	19	chr16	31258226	31258278	protein_coding	Ppp1r2	utr3	ENSMUSG00000047714	ProperStrand	10	1	-18.8818
chr10	6063959	6063978	protein_coding	Akap12	intron	ENSMUSG00000038587	ProperStrand	1008	chr17	23961256	23961335	protein_coding	Srrm2	utr3	ENSMUSG00000039218	ProperStrand	521	1	-3.4947
chr11	98878363	98878453	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	chr6	70805454	70805534	snoRNA	ENSMUSG00000065750_SNORA5	.	ENSMUSG00000065750	ProperStrand	165	2	-7.2040
chr19	6984448	6984464	protein_coding	Prdx5	utr5	ENSMUSG00000024953	ProperStrand	24	chr7	109149271	109149287	protein_coding	Numa1	exon	ENSMUSG00000066306	NonProperStrand	171	1	-13.0653
chr1	20723838	20723854	protein_coding	Il17a	exon	ENSMUSG00000025929	ProperStrand	5	chr14	76247714	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	5	-inf
chr11	62418036	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	chr16	43886794	43886829	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	1	-1.0312
chr17	71533171	71533187	protein_coding	Lpin2	intron	ENSMUSG00000024052	ProperStrand	18	chr5	108336363	108336408	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-7.2692
chr2	120333412	120361130	protein_coding	Zfp106	exon	ENSMUSG00000027288	ProperStrand	199	chr16	23110828	23111453	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	9	-1.1951
chr17	23955819	23955836	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	chr11	67584274	67584290	protein_coding	Glp2r	intron	ENSMUSG00000049928	NonProperStrand	4	1	-17.2092
chr16	32284432	32284477	protein_coding	Rnf168	intron	ENSMUSG00000014074	NonProperStrand	3	chr8	13876097	13876187	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-13.4971
chr4	134301662	134301711	protein_coding	Ldlrap1	utr3	ENSMUSG00000037295	ProperStrand	18	chr18	35714144	35714234	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	5	-22.0931
chr7	119253776	119253792	protein_coding	Usp47	utr3	ENSMUSG00000059263	ProperStrand	40	chr5	130295431	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-6.0443
chr4	43429568	43434544	protein_coding	Rusc2	exon	ENSMUSG00000035969	ProperStrand	22	chr4	131908728	131908808	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.8292
chr2	26493394	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr15	97620338	97620367	protein_coding	Slc48a1	exon	ENSMUSG00000081534	ProperStrand	16	4	-22.4264
chr11	33063036	33063073	protein_coding	Npm1	utr5	ENSMUSG00000057113	ProperStrand	352	chr1	88247752	88247801	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-1.9073
chr2	172198514	172198553	protein_coding	Cstf1	exon	ENSMUSG00000027498	ProperStrand	13	chr8	74446729	74446745	protein_coding	Zfp617	intron	ENSMUSG00000066880	NonProperStrand	208	1	-13.9332
chr11	49619891	49619912	protein_coding-noncoding	Gfpt2	utr5	ENSMUSG00000020363	ProperStrand	5	chr1	145626057	145626185	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	5	-inf
chr6	35155417	35155517	protein_coding	Nup205	exon	ENSMUSG00000038759	ProperStrand	56	chr17	24857817	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.4132
chr1	162286088	162286104	protein_coding	Rabgap1l	intron	ENSMUSG00000026721	ProperStrand	44	chr8	113362431	113362512	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	1	-9.8896
chr7	120427036	120428562	protein_coding	Arntl	exon	ENSMUSG00000055116	ProperStrand	14	chr2	26494722	26494802	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-9.7071
chr4	139013543	139013559	protein_coding	Ubr4	exon	ENSMUSG00000066036	NonProperStrand	14	chr5	108334240	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	2	-12.4410
chr2	129998643	129998715	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	5	-5.4859
chr5	28396620	28396643	lincRNA	Gm16719	intron	ENSMUSG00000085535	NonProperStrand	6	chr16	19883899	19884021	protein_coding	A930003A15Rik	exon	ENSMUSG00000075330	ProperStrand	93	1	-17.0255
chr2	121923886	121923945	protein_coding	Spg11	exon	ENSMUSG00000033396	ProperStrand	32	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	2	-14.2768
chr19	58880692	58880710	protein_coding	Hspa12a	intron	ENSMUSG00000025092	NonProperStrand	17	chr18	35716762	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.4666
chr4	21797544	21798592	protein_coding	Sfrs18	exon	ENSMUSG00000028248	NonProperStrand	26	chr9	120038472	120038564	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.6046
chr8	72322760	72323225	protein_coding	Atp13a1	exon	ENSMUSG00000031862	ProperStrand	75	chr7	29136525	29136550	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.9970
chr9	78326778	78328224	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr7	116664795	116664925	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	19	-1.9537
chr13	49797893	49798611	protein_coding	Iars	exon	ENSMUSG00000037851	ProperStrand	95	chr2	91434980	91435477	protein_coding	Ckap5	exon	ENSMUSG00000040549	ProperStrand	53	1	-12.6414
chr1	71670703	71670754	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr2	32818840	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-0.8307
chr8	71636441	71636531	protein_coding	Atp6v1b2	utr3	ENSMUSG00000006273	ProperStrand	29	chr4	131866156	131866236	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-8.3559
chr14	57081927	57082017	protein_coding	Rnf17	exon	ENSMUSG00000000365	ProperStrand	16	chr7	148634749	148634829	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-6.5767
chr5	115939531	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr6	124665340	124665430	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	1	-1.8827
chrX	143918838	143918911	snoRNA	ENSMUSG00000084421_SNORA35	.	ENSMUSG00000084421	ProperStrand	293	chr13	90238636	90238664	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	3	-12.7832
chr13	55454391	55454415	protein_coding	Lman2	exon	ENSMUSG00000021484	ProperStrand	26	chr1	162965980	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-5.2030
chr11	87236497	87236535	snRNA	ENSMUSG00000070246_U1	.	ENSMUSG00000070246	ProperStrand	8	chr18	35716808	35716877	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-5.9895
chr18	68467231	68467250	protein_coding	Rnmt	intron	ENSMUSG00000009535	ProperStrand	21	chr10	23506324	23506347	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-9.0597
chr7	146684406	146684425	protein_coding	Inpp5a	intron	ENSMUSG00000025477	ProperStrand	166	chr5	124179198	124179214	protein_coding	Rsrc2	exon	ENSMUSG00000029422	ProperStrand	17	1	-13.8363
chr11	115935746	115937022	protein_coding	Unc13d	exon	ENSMUSG00000057948	ProperStrand	89	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.8788
chr18	77368851	77368909	protein_coding	Pias2	intron	ENSMUSG00000025423	ProperStrand	52	chr11	69481387	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.4617
chr2	158185571	158185621	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr11	116533850	116533890	snoRNA	ENSMUSG00000065640_Snord1c	.	ENSMUSG00000065640	ProperStrand	373	2	-5.1880
chr8	73998934	73999055	protein_coding	Dda1	utr3	ENSMUSG00000074247	ProperStrand	11	chr17	13112563	13112588	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-7.9692
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr9	15118322	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	7	-5.5111
chr17	25928998	25929050	protein_coding	Fam173a	exon	ENSMUSG00000057411	ProperStrand	3	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-14.5266
chr12	70993746	70993763	protein_coding	Map4k5	utr5	ENSMUSG00000034761	ProperStrand	6	chr19	8798740	8798759	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-9.4911
chr2	35013247	35013299	protein_coding	Cep110	exon	ENSMUSG00000057110	ProperStrand	20	chr7	116663711	116663763	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.5385
chr6	115757992	115758117	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr17	71990939	71990999	snoRNA	ENSMUSG00000092713_CT010429.1	.	ENSMUSG00000092713	ProperStrand	182	2	-5.7427
chr2	18107940	18118212	protein_coding	Mllt10	exon	ENSMUSG00000026743	ProperStrand	30	chr17	24857716	24857741	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.5270
chr2	32818803	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	chr9	20695248	20695273	snoRNA	ENSMUSG00000089571_snoU105B	.	ENSMUSG00000089571	ProperStrand	12	3	-19.2975
chr5	98316133	98316152	protein_coding	Antxr2	intron	ENSMUSG00000029338	NonProperStrand	2	chr10	77863431	77863542	protein_coding	Rrp1	utr3	ENSMUSG00000061032	ProperStrand	177	1	-19.6416
chr2	90235296	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	96680540	96680640	protein_coding	Nfe2l1	exon	ENSMUSG00000038615	ProperStrand	118	1	-3.2036
chr2	157105061	157109325	protein_coding	4922505G16Rik	utr5	ENSMUSG00000074627	ProperStrand	12	chr19	8800377	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-6.6789
chr13	74474894	74474927	protein_coding	Sdha	exon	ENSMUSG00000021577	ProperStrand	70	chr7	116664817	116664921	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.2874
chr1	74350731	74350749	protein_coding	Pnkd	intron	ENSMUSG00000026179	ProperStrand	22	chr14	48162815	48165315	protein_coding	Atg14	exon	ENSMUSG00000037526	ProperStrand	12	1	-19.2765
chr18	71342315	71342405	LINE	L1Md_F2	L1	chr18L1Md_F271342040	NonProperStrand	1	chr13	34901185	34901275	LTR	RMER19A	ERVK	chr13RMER19A34901028	ProperStrand	1	1	-inf
chr19	46836213	46836229	protein_coding	Cnnm2	utr5	ENSMUSG00000064105	NonProperStrand	19	chr7	116663662	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.6387
chr2	90235310	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	ProperStrand	24	chr18	33954814	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	NonProperStrand	24	2	-inf
chr13	51743567	51743660	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	chr15	98356818	98356913	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	3	-4.8935
chr9	61908370	61908421	protein_coding	Glce	exon	ENSMUSG00000032252	ProperStrand	15	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-9.7858
chr7	73254765	73254782	lincRNA	Gm17504	intron	ENSMUSG00000091826	ProperStrand	4	chr2	144150553	144150574	protein_coding	Ovol2	intron	ENSMUSG00000037279	ProperStrand	2	1	-inf
chr1	34318872	34318910	protein_coding	Dst	exon	ENSMUSG00000026131	ProperStrand	461	chr11	69481434	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-0.8139
chr8	95377038	95377057	protein_coding	Mmp2	utr3	ENSMUSG00000031740	ProperStrand	42	chr10	107800728	107800818	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	1	-8.7861
chr6	37110293	37110309	protein_coding	Dgki	intron	ENSMUSG00000038665	NonProperStrand	16	chr18	73693166	73693190	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-8.1701
chr10	80644648	80644748	protein_coding	Eef2	exon	ENSMUSG00000034994	NonProperStrand	20	chr9	15118325	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	NonProperStrand	11	1	-18.9447
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr9	30957918	30957965	protein_coding	Aplp2	utr3	ENSMUSG00000031996	ProperStrand	172	1	-2.9892
chr5	77738902	77738918	protein_coding	Noa1	exon	ENSMUSG00000036285	ProperStrand	147	chr4	155366536	155366553	protein_coding	B3galt6	exon	ENSMUSG00000050796	ProperStrand	40	1	-12.3332
chr14	56270423	56270439	protein_coding	Tssk4	exon	ENSMUSG00000007591	ProperStrand	1	chr11	101619008	101623532	protein_coding	Dhx8	exon	ENSMUSG00000034931	ProperStrand	48	1	-inf
chr17	27699671	27699718	protein_coding	Hmga1	utr3	ENSMUSG00000046711	ProperStrand	180	chr5	147646450	147646477	snoRNA	ENSMUSG00000077185_SNORD102	.	ENSMUSG00000077185	ProperStrand	142	1	-9.3817
chr13	58300323	58300345	protein_coding	Ubqln1	exon	ENSMUSG00000005312	ProperStrand	49	chr18	35716832	35716883	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.5106
chr10	126363563	126363653	SINE	B2_Mm2	B2	chr10B2_Mm2126363534	NonProperStrand	1	chr10	126363349	126363439	SINE	B3	B2	chr10B3126363326	ProperStrand	1	1	-inf
chr11	78396895	78400411	protein_coding	Nlk	exon	ENSMUSG00000017376	ProperStrand	26	chr11	77995191	77995231	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	3	-17.5875
chr2	29658465	29659764	protein_coding	Slc27a4	utr5	ENSMUSG00000059316	ProperStrand	24	chr16	23111464	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.7195
chr17	39979976	39980014	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr2	29002025	29002087	protein_coding	Setx	exon	ENSMUSG00000043535	ProperStrand	187	3	-11.7377
chr16	23110537	23110589	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr7	117505610	117505645	protein_coding	Sbf2	exon	ENSMUSG00000038371	ProperStrand	17	1	-11.5720
chr9	57379526	57380089	protein_coding	Cox5a	utr3	ENSMUSG00000000088	ProperStrand	26	chr9	78329455	78329478	protein_coding	Eef1a1	utr5	ENSMUSG00000037742	ProperStrand	1990	1	-8.0061
chr2	28615598	28665191	protein_coding	Ak8	exon	ENSMUSG00000026807	NonProperStrand	21	chr12	106269284	106269343	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-6.1898
chr1	63161264	63161281	lincRNA	Gm11602	intron	ENSMUSG00000084799	ProperStrand	22	chr4	46554809	46554826	protein_coding	Coro2a	exon	ENSMUSG00000028337	NonProperStrand	24	1	-17.1497
chr16	23110985	23111010	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr9	78328185	78328375	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-2.3250
chr4	138843962	138844042	protein_coding	Capzb	intron	ENSMUSG00000028745	NonProperStrand	21	chr8	124024625	124024715	protein_coding	Gm20388	intron	ENSMUSG00000092329	ProperStrand	295	1	-12.2483
chr7	31383814	31383883	protein_coding	Zbtb32	utr5	ENSMUSG00000006310	ProperStrand	2	chr11	97643032	97643122	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	1	-15.3054
chr9	106332640	106333436	protein_coding	Rpl29	exon	ENSMUSG00000048758	ProperStrand	45	chr8	32260335	32260411	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-5.1866
chr11	68936358	68936374	protein_coding	Hes7	exon	ENSMUSG00000023781	NonProperStrand	66	chr7	86601606	86601627	protein_coding	Polg	exon	ENSMUSG00000039176	ProperStrand	93	1	-12.2409
chr11	4820972	4820990	protein_coding	Thoc5	intron	ENSMUSG00000034274	ProperStrand	325	chr7	52096721	52096738	protein_coding	Tbc1d17	exon	ENSMUSG00000038520	ProperStrand	20	1	-12.1549
chr10	40079395	40079412	protein_coding	Cdk19	intron	ENSMUSG00000038481	ProperStrand	34	chr18	35716763	35716831	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.1571
chr13	38750801	38750862	protein_coding	Eef1e1	exon	ENSMUSG00000001707	ProperStrand	7	chr4	46508048	46508138	snoRNA	ENSMUSG00000064410_SNORA36	.	ENSMUSG00000064410	ProperStrand	133	1	-16.1518
chr10	80643980	80644707	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr9	78328210	78328379	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	2	-0.9114
chr14	45949538	45949554	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	chr11	6428089	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-1.3745
chr11	98878340	98878373	protein_coding-noncoding	Top2a	utr3	ENSMUSG00000020914	ProperStrand	18	chr16	23111773	23111825	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.0433
chr13	95335881	95335898	protein_coding	Ap3b1	utr3	ENSMUSG00000021686	NonProperStrand	24	chr11	62416949	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-7.8732
chr9	15118283	15118322	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	chr4	3762227	3762293	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	2	-1.2565
chr2	26494773	26494829	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	NonProperStrand	27	chr16	38158206	38158226	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	NonProperStrand	1	1	-inf
chr1	189536649	189536667	protein_coding	Esrrg	intron	ENSMUSG00000026610	ProperStrand	24	chr4	117898846	117898965	protein_coding	Ptprf	exon	ENSMUSG00000033295	ProperStrand	337	1	-11.7100
chr1	165924784	165924874	protein_coding	BC055324	utr5	ENSMUSG00000041406	ProperStrand	35	chr16	23110828	23110904	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.8578
chr4	81936716	81936732	protein_coding	Nfib	utr3	ENSMUSG00000008575	NonProperStrand	10	chr3	108357255	108357349	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-8.1266
chr8	109192566	109192609	protein_coding	Cdh1	utr3	ENSMUSG00000000303	ProperStrand	283	chr16	23111758	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-0.9114
chr7	52139554	52139587	protein_coding	Med25	exon	ENSMUSG00000002968	ProperStrand	33	chr11	106362660	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-8.6034
chr7	36331867	36331885	SINE	RSINE1	B4	chr7RSINE136331860	NonProperStrand	11	chr2	167836657	167836682	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	1	-15.5918
chr12	112779156	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	chr8	13876173	13876228	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	6	-3.3906
chr14	20630777	20630819	protein_coding	Nid2	utr3	ENSMUSG00000021806	ProperStrand	372	chr4	85016349	85016365	protein_coding	Sh3gl2	intron	ENSMUSG00000028488	NonProperStrand	313	2	-10.3055
chr4	129662259	129662276	protein_coding	Bai2	utr5	ENSMUSG00000028782	ProperStrand	119	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-6.8170
chr3	104597076	104597166	protein_coding	Rhoc	utr3	ENSMUSG00000002233	ProperStrand	41	chr8	98269972	98270052	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-6.2916
chr3	23326181	23326197	LTR	RLTR9D	ERVK	chr3RLTR9D23325954	ProperStrand	21	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.5891
chr3	85942713	85942758	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	chr12	110887828	110887893	snoRNA	ENSMUSG00000084549_SNORD113	.	ENSMUSG00000084549	ProperStrand	196	1	-7.3558
chrX	36161504	36161521	protein_coding	6030498E09Rik	intron	ENSMUSG00000051361	NonProperStrand	5	chr11	6428060	6428158	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-8.1751
chr7	13613442	13613814	protein_coding	Trim28	exon	ENSMUSG00000005566	ProperStrand	296	chr11	55296313	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-3.1455
chr10	122574869	122574886	protein_coding	Usp15	intron	ENSMUSG00000020124	NonProperStrand	18	chr4	116827120	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-9.4687
chr2	103609004	103609635	protein_coding	Caprin1	exon	ENSMUSG00000027184	ProperStrand	145	chr11	97642952	97642968	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.1218
chr5	74489229	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr11	77995188	77995236	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	6	-3.1659
chr17	56745029	56745047	protein_coding	Safb	utr3	ENSMUSG00000071054	ProperStrand	79	chr4	131908236	131908298	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.0451
chr17	39980034	39980124	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr3	88684243	88684322	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-1.6187
chr6	104782631	104782648	protein_coding	Cntn6	exon	ENSMUSG00000030092	NonProperStrand	5	chr7	86596478	86596494	protein_coding	Polg	exon	ENSMUSG00000039176	ProperStrand	93	1	-17.4832
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	113522177	113522193	protein_coding	2900026A02Rik	exon	ENSMUSG00000051339	NonProperStrand	29	1	-5.8800
chr11	30008410	30008457	protein_coding	Spnb2	utr3	ENSMUSG00000020315	ProperStrand	103	chr14	61398407	61398423	protein_coding	C1qtnf9	exon	ENSMUSG00000071347	ProperStrand	187	1	-9.9479
chr16	64851346	64851368	Simple_repeat	(CCG)n	Simple_repeat	chr16(CCG)n64851329	NonProperStrand	15	chr9	103401280	103401296	protein_coding	Tmem108	exon	ENSMUSG00000042757	NonProperStrand	323	1	-12.7608
mmu-miR-292a-3p	1	24	miRNA	mmu-miR-292a-3p	.	mmu-miR-292a-3p	ProperStrand	38	chr4	131866176	131866276	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-4.5291
chr4	145676271	145676361	protein_coding	Gm13247	intron	ENSMUSG00000056300	ProperStrand	10	chr4	131865413	131865493	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-7.5608
chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	chr11	62416601	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-1.5830
chr11	55296215	55296305	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	chr2	91436228	91436289	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	6	-8.2160
chr7	86596570	86596606	protein_coding	Polg	exon	ENSMUSG00000039176	ProperStrand	93	chr10	23505152	23505209	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-0.6988
chr10	126773764	126774134	protein_coding	Gli1	exon	ENSMUSG00000025407	ProperStrand	48	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-7.4276
chr12	81268813	81269335	protein_coding	Actn1	utr3	ENSMUSG00000015143	ProperStrand	128	chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	2	-8.1936
chr14	68647920	68648057	LINE	L1Md_T	L1	chr14L1Md_T68647757	ProperStrand	1	chr14	56159296	56159314	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	1	-inf
chr7	134337326	134337416	protein_coding	Cd2bp2	utr3	ENSMUSG00000042502	ProperStrand	73	chr6	71832602	71832682	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-5.2285
chr12	84023954	84023971	protein_coding	Rgs6	intron	ENSMUSG00000021219	NonProperStrand	65	chr19	8963089	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.1423
chr8	11408123	11409438	antisense	Gm15419	.	ENSMUSG00000084783	ProperStrand	2	chr4	131865410	131865510	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	NonProperStrand	15	1	-inf
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	180610252	180610270	lincRNA	Gm14342	intron	ENSMUSG00000086166	NonProperStrand	18	2	-11.0833
chr1	96174313	96174393	LTR	RMER19B	ERVK	chr1RMER19B96173598	NonProperStrand	1	chr5	44499476	44499566	LTR	RMER19B	ERVK	chr5RMER19B44498908	NonProperStrand	1	1	-inf
chr14	51463983	51463999	protein_coding	Tep1	exon	ENSMUSG00000006281	NonProperStrand	73	chrX	84483703	84483732	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-7.8571
chr4	11849262	11849280	LINE	Lx8	L1	chr4Lx811849111	NonProperStrand	12	chr11	97889139	97889187	protein_coding	Rpl19	exon	ENSMUSG00000017404	ProperStrand	120	1	-15.2190
chr2	26493366	26493456	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr17	26360445	26360530	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	2	-2.0841
chr5	137773845	137773865	protein_coding	Slc12a9	utr5	ENSMUSG00000037344	NonProperStrand	6	chr3	123210883	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-6.4760
chr3	97856312	97856330	protein_coding	Notch2	intron	ENSMUSG00000027878	NonProperStrand	6	chr13	47158482	47159472	protein_coding	Kdm1b	exon	ENSMUSG00000038080	ProperStrand	7	1	-19.6825
chr10	74708944	74708961	protein_coding	Specc1l	exon	ENSMUSG00000033444	ProperStrand	36	chr5	108336363	108336460	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	3	-13.6257
chr11	85048390	85048436	protein_coding	Appbp2	utr5	ENSMUSG00000018481	ProperStrand	15	chr19	4913948	4914591	protein_coding	Dpp3	exon	ENSMUSG00000063904	ProperStrand	36	1	-17.1435
chr19	16222602	16222619	protein_coding	Gnaq	intron	ENSMUSG00000024639	ProperStrand	38	chr19	8799020	8799077	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-6.7367
chr12	55835596	55835686	snRNA	ENSMUSG00000075960_U1	.	ENSMUSG00000075960	ProperStrand	210	chrX	34622991	34623037	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	9	-15.0574
chr9	65127126	65127142	protein_coding	Cilp	exon	ENSMUSG00000042254	ProperStrand	212	chr11	106362638	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-4.9275
chr19	3381980	3382003	protein_coding	Cpt1a	exon	ENSMUSG00000024900	ProperStrand	48	chr8	98269966	98270067	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-5.9799
chr15	12199874	12199901	protein_coding	Mtmr12	utr3	ENSMUSG00000039458	ProperStrand	16	chr18	71487780	71487796	protein_coding	Dcc	intron	ENSMUSG00000060534	NonProperStrand	29	1	-17.6077
chr9	59513743	59516441	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr2	17963330	17963347	protein_coding	2810030E01Rik	intron	ENSMUSG00000054074	ProperStrand	15	1	-9.9834
chr4	131399490	131399506	protein_coding	Mecr	exon	ENSMUSG00000028910	NonProperStrand	109	chr16	23110879	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	8	-3.3287
chr13	9833551	9833617	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr1	162966813	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	4	-0.8462
chr4	148494137	148494153	protein_coding	Dffa	utr3	ENSMUSG00000028974	ProperStrand	55	chr17	24856621	24856746	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	2	-10.6661
chr11	87240292	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	chr14	76247763	76247843	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-2.1095
chr17	23946975	23947406	protein_coding	Srrm2	utr5	ENSMUSG00000039218	ProperStrand	521	chr17	24665447	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-1.2125
chr14	10242347	10242427	LINE	L1VL2	L1	chr14L1VL210240824	NonProperStrand	1	chr18	50962034	50962124	LINE	L1_Mus4	L1	chr18L1_Mus450956319	NonProperStrand	1	1	-inf
chr16	8658858	8658890	protein_coding	Carhsp1	utr3	ENSMUSG00000008393	ProperStrand	15	chr4	131908236	131908296	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.7937
chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	chr17	35087896	35087962	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-2.5800
chr11	40535142	40535161	protein_coding	Hmmr	exon	ENSMUSG00000020330	ProperStrand	61	chr13	69703156	69703173	protein_coding	Nsun2	intron	ENSMUSG00000021595	ProperStrand	110	1	-12.0634
chr5	93600371	93600406	protein_coding	Sept11	utr3	ENSMUSG00000058013	ProperStrand	79	chr9	64022856	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-7.4766
chr5	135408651	135408741	protein_coding	Wbscr27	intron	ENSMUSG00000040557	ProperStrand	2	chr7	117166727	117166807	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-12.2088
chr16	29946280	29946363	lincRNA	Gm16761	intron	ENSMUSG00000084810	ProperStrand	2	chr10	23505177	23505267	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-8.0476
chr7	107065549	107065565	protein_coding	Xrra1	exon	ENSMUSG00000035211	NonProperStrand	24	chr11	106362640	106362693	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	2	-14.6828
chr11	119136228	119136244	protein_coding	Gaa	exon	ENSMUSG00000025579	NonProperStrand	201	chr8	72323802	72323955	protein_coding	Atp13a1	exon	ENSMUSG00000031862	ProperStrand	75	1	-10.4398
chr11	106643502	106643535	protein_coding	Ddx5	exon	ENSMUSG00000020719	ProperStrand	181	chr10	80641716	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	1	-5.3728
chr9	30235085	30235101	protein_coding	Snx19	exon	ENSMUSG00000031993	ProperStrand	353	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-3.2051
chr12	110881050	110881114	lincRNA	Rian	intron	ENSMUSG00000091793	ProperStrand	612	chr5	130295414	130295451	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	2	-2.3258
chr12	114290175	114290191	protein_coding	Pacs2	intron	ENSMUSG00000021143	NonProperStrand	302	chr13	96100640	96100674	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	1	-4.8904
chr7	13511802	13511828	protein_coding	Rps5	exon	ENSMUSG00000012848	ProperStrand	108	chr5	108336363	108336469	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	4	-12.3487
chr7	138645961	138645978	protein_coding	Fgfr2	intron	ENSMUSG00000030849	NonProperStrand	95	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-6.8259
chr6	52139837	52139854	antisense	2700086A05Rik	.	ENSMUSG00000085696	ProperStrand	13	chr4	131865394	131865515	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	2	-11.3941
chr11	52059633	52059723	protein_coding	Skp1a	utr3	ENSMUSG00000036309	ProperStrand	8	chr16	23111373	23111453	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.8232
chr11	69870769	69870785	protein_coding	Asgr1	exon	ENSMUSG00000020884	NonProperStrand	145	chr12	88778700	88778755	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-4.7758
chrX	84483698	84483741	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr1	162965536	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	4	-1.0766
chr1	84790798	84790888	protein_coding	Trip12	exon	ENSMUSG00000026219	ProperStrand	248	chr2	60074978	60079066	protein_coding	March7	exon	ENSMUSG00000026977	ProperStrand	8	1	-14.5930
chr16	96252276	96252293	protein_coding	Brwd1	exon	ENSMUSG00000022914	NonProperStrand	13	chr1	63225588	63225625	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-9.7632
chr2	167174702	167174775	Low_complexity	G-rich	Low_complexity	chr2G-rich167174714	NonProperStrand	1	chr10	120709244	120712786	protein_coding	Tbc1d30	exon	ENSMUSG00000052302	ProperStrand	233	1	-inf
chr7	134891905	134891935	protein_coding	Fbxl19	exon	ENSMUSG00000030811	ProperStrand	15	chr7	116663633	116663733	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-5.1056
chr12	105934984	105935066	protein_coding	Dicer1	exon	ENSMUSG00000041415	ProperStrand	61	chr18	35716806	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.1424
chr16	10071854	10071944	SINE	B1_Mus1	Alu	chr16B1_Mus110071858	ProperStrand	1	chr12	114340298	114340388	protein_coding	Mta1	intron	ENSMUSG00000021144	NonProperStrand	11	1	-inf
chr7	52377919	52378270	protein_coding	Rps11	exon	ENSMUSG00000003429	ProperStrand	49	chr11	69483170	69483260	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.8009
chr15	100416584	100416600	protein_coding	Pou6f1	intron	ENSMUSG00000009739	ProperStrand	44	chr17	35357339	35357397	protein_coding	Nfkbil1	exon	ENSMUSG00000042419	ProperStrand	4	1	-inf
chr11	67005924	67005940	protein_coding	Myh2	exon	ENSMUSG00000033196	ProperStrand	66	chr7	116663659	116663759	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.3498
chr8	86782815	86784198	protein_coding	Ccdc130	exon	ENSMUSG00000004994	ProperStrand	29	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-7.7360
chr1	33828651	33828669	protein_coding	Zfp451	intron	ENSMUSG00000042197	NonProperStrand	393	chr11	106362569	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	2	-6.3419
chr19	46154414	46154446	protein_coding	Nolc1	exon	ENSMUSG00000015176	ProperStrand	53	chr3	123210854	123210983	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	7	-16.3874
chr11	95934467	95934495	protein_coding	Atp5g1	exon	ENSMUSG00000006057	ProperStrand	9	chr4	131908236	131908296	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-8.1084
chr4	87940538	87940559	protein_coding-noncoding	BC057079	utr5	ENSMUSG00000038368	ProperStrand	2	chr7	52382234	52382303	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-15.7512
chr14	51427119	51427219	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr8	125021758	125021775	protein_coding	Fam38a	exon	ENSMUSG00000014444	ProperStrand	132	1	-5.6543
chr15	85093910	85094000	protein_coding-noncoding	Fbln1	utr5	ENSMUSG00000006369	NonProperStrand	1	chr15	85094014	85094094	protein_coding	Fbln1	intron	ENSMUSG00000006369	NonProperStrand	2	1	-inf
chr1	174492230	174492246	protein_coding	Vsig8	exon	ENSMUSG00000049598	ProperStrand	27	chr4	119406400	119406422	protein_coding	Hivep3	utr5	ENSMUSG00000078582	ProperStrand	1	1	-inf
chr8	95198374	95198391	protein_coding	Irx6	utr5	ENSMUSG00000031738	ProperStrand	16	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-7.8497
chr11	115470400	115470458	protein_coding	Mif4gd	exon	ENSMUSG00000020743	ProperStrand	6	chr1	66521957	66521973	protein_coding	Unc80	intron	ENSMUSG00000055567	NonProperStrand	212	1	-15.5065
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	90123798	90124639	protein_coding	Heatr7b1	utr5	ENSMUSG00000079429	ProperStrand	147	2	-4.8860
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr13	58400751	58400770	protein_coding	Kif27	intron	ENSMUSG00000060176	ProperStrand	75	1	-4.0395
mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr12	59369666	59369682	protein_coding	Clec14a	exon	ENSMUSG00000045930	ProperStrand	6	1	-10.6285
chr15	81110991	81111009	SINE	ID4	ID	chr15ID481110956	ProperStrand	272	chr17	35089181	35089228	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-2.6673
chr12	17552972	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr11	55296215	55296295	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	5	-1.4194
chr14	76247711	76247842	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	chr6	71832550	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	15	-3.7961
chr5	74489201	74489249	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr17	81344133	81344150	protein_coding	Tmem178	exon	ENSMUSG00000024245	ProperStrand	67	3	-12.6129
chr5	67074944	67078082	protein_coding	Uchl1	exon	ENSMUSG00000029223	ProperStrand	29	chr9	63868722	63868738	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	8	-20.1980
chr7	111030493	111030510	protein_coding	Olfr66	exon	ENSMUSG00000058200	ProperStrand	3	chr4	131908356	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-inf
chr16	11144158	11144258	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr6	131330290	131330365	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	NonProperStrand	4	2	-20.5704
chr3	63767439	63767472	protein_coding	Slc33a1	exon	ENSMUSG00000027822	ProperStrand	10	chr19	8798767	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-8.3986
chr15	102321156	102321222	protein_coding	Pcbp2	exon	ENSMUSG00000056851	ProperStrand	164	chr2	91485388	91485426	protein_coding	Zfp408	exon	ENSMUSG00000075040	ProperStrand	4	1	-16.9688
chr9	44216789	44216832	protein_coding	Rps25	exon	ENSMUSG00000009927	ProperStrand	42	chr9	43856545	43856573	protein_coding	Thy1	utr3	ENSMUSG00000032011	ProperStrand	8	1	-17.9622
chr19	3605334	3605376	protein_coding	Lrp5	exon	ENSMUSG00000024913	ProperStrand	145	chr16	23111732	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-0.7092
chr2	26768368	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	chr2	130101971	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	9	-3.5894
chr17	39985196	39985286	pseudogene	AY036118	.	ENSMUSG00000045999	ProperStrand	57	chr16	23111373	23111447	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	NonProperStrand	38	1	-14.3366
chr5	90658121	90658243	protein_coding	Ankrd17	utr3	ENSMUSG00000055204	ProperStrand	77	chr3	123210907	123210933	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-3.0956
chr13	97421898	97422069	protein_coding	Hmgcr	exon	ENSMUSG00000021670	ProperStrand	56	chr11	6428040	6428120	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.3176
chr3	35735933	35736484	protein_coding	Atp11b	exon	ENSMUSG00000037400	ProperStrand	39	chr7	116663634	116663714	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-5.6284
chr10	127152705	127152721	protein_coding	Myo1a	exon	ENSMUSG00000025401	ProperStrand	93	chr11	106362637	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-6.5349
chr11	120148350	120148420	protein_coding	Bahcc1	exon	ENSMUSG00000039741	ProperStrand	118	chr15	79913288	79913332	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.3917
chr2	179628011	179628029	protein_coding	Cdh4	exon	ENSMUSG00000000305	ProperStrand	171	chr9	50816824	50816841	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	1	-9.7073
chr10	80189839	80189873	protein_coding	Ap3d1	exon	ENSMUSG00000020198	ProperStrand	42	chr19	38869531	38869547	protein_coding	Noc3l	exon	ENSMUSG00000024999	NonProperStrand	149	1	-12.2079
chr17	30772308	30772324	protein_coding	Dnahc8	utr5	ENSMUSG00000033826	ProperStrand	246	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-8.8594
chr10	13562823	13562840	protein_coding	Aig1	intron	ENSMUSG00000019806	ProperStrand	49	chr9	45586566	45586889	protein_coding	Cep164	exon	ENSMUSG00000043987	ProperStrand	7	1	-18.6027
chr3	100369431	100369447	protein_coding	Man1a2	utr3	ENSMUSG00000008763	NonProperStrand	28	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-10.1299
chr1	153505488	153505527	protein_coding	Fam129a	intron	ENSMUSG00000026483	NonProperStrand	10	chr1	88247789	88247876	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-8.7050
chr5	122608607	122622788	protein_coding	Ppp1cc	exon	ENSMUSG00000004455	ProperStrand	46	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-6.3763
chr9	44918660	44918676	protein_coding	Gm10684	utr5	ENSMUSG00000074385	ProperStrand	17	chr8	73419657	73419738	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-5.5405
mmu-miR-6240	1	23	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr15	74369679	74369696	protein_coding	Bai1	exon	ENSMUSG00000034730	ProperStrand	22	1	-7.9078
chr18	20629563	20629581	protein_coding	Dsg4	exon	ENSMUSG00000001804	NonProperStrand	13	chr16	23111708	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-15.2964
chr7	73255023	73255041	protein_coding	Chsy1	exon	ENSMUSG00000032640	ProperStrand	25	chr10	23505559	23505621	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-9.3122
chr17	45552609	45553912	protein_coding	Cdc5l	exon	ENSMUSG00000023932	ProperStrand	59	chr16	23111416	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-5.5728
chr9	13610484	13610552	protein_coding	Mtmr2	utr3	ENSMUSG00000031918	ProperStrand	22	chr2	26493366	26493387	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-5.6800
chr17	28467901	28467941	protein_coding	Rpl10a	exon	ENSMUSG00000037805	ProperStrand	121	chr15	8181185	8181201	protein_coding	2410089E03Rik	exon	ENSMUSG00000039801	ProperStrand	43	1	-12.5769
chr8	72327475	72327497	protein_coding	Atp13a1	exon	ENSMUSG00000031862	ProperStrand	75	chr10	23505152	23505255	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-3.0844
chr7	38354919	38354935	protein_coding	Zfp536	exon	ENSMUSG00000043456	NonProperStrand	236	chr7	52715002	52715032	protein_coding	Ftl1	utr5	ENSMUSG00000050708	ProperStrand	807	1	-5.4134
chr11	50121874	50121890	protein_coding	Canx	exon	ENSMUSG00000020368	ProperStrand	296	chr17	39985567	39985666	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-2.9203
chr1	136225761	136225778	protein_coding	Ppfia4	exon	ENSMUSG00000026458	ProperStrand	45	chr17	28465961	28466384	protein_coding	Rpl10a	exon	ENSMUSG00000037805	ProperStrand	121	1	-12.4845
chrX	11634403	11634503	protein_coding	Bcor	exon	ENSMUSG00000040363	ProperStrand	20	chr10	110918630	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-5.5586
chr3	33960933	33963065	protein_coding	Fxr1	exon	ENSMUSG00000027680	ProperStrand	58	chr2	26493366	26493448	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-6.4301
chr2	9985901	9985917	protein_coding	Atp5c1	exon	ENSMUSG00000025781	ProperStrand	138	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-4.2346
chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	chr18	75160882	75161357	protein_coding	Rpl17	exon	ENSMUSG00000062328	ProperStrand	90	1	-7.9524
mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr2	174251991	174252076	protein_coding	Th1l	exon	ENSMUSG00000016253	ProperStrand	40	2	-10.8375
chr5	115940324	115940407	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	chr4	131908236	131908396	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	13	-2.4532
chr1	138741568	138741625	protein_coding	Nr5a2	utr3	ENSMUSG00000026398	ProperStrand	43	chr9	103950068	103950086	protein_coding	Uba5	intron	ENSMUSG00000032557	ProperStrand	111	1	-12.7516
chr19	4152561	4153298	protein_coding	Coro1b	exon	ENSMUSG00000024835	ProperStrand	13	chr11	69483151	69483231	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-8.8334
chr8	122333322	122333422	protein_coding	Cotl1	utr3	ENSMUSG00000031827	ProperStrand	11	chr2	26768390	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	7	-21.3564
chr5	121658520	121658583	protein_coding	Rpl6	exon	ENSMUSG00000029614	ProperStrand	332	chr17	35384132	35384195	snoRNA	ENSMUSG00000065273_SNORD83	.	ENSMUSG00000065273	ProperStrand	244	2	-11.3839
chr19	8798740	8798817	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	chr5	111121060	111121184	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	4	-0.8648
chr6	53176437	53176453	LTR	MTE2b	MaLR	chr6MTE2b53176429	ProperStrand	5	chr11	97580214	97581057	protein_coding	Pip4k2b	exon	ENSMUSG00000018547	ProperStrand	46	1	-18.6272
chr5	121161868	121161886	protein_coding	Dtx1	utr5	ENSMUSG00000029603	NonProperStrand	33	chr9	15119287	15119353	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-6.2841
mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr10	127918040	127919232	protein_coding	Smarcc2	exon	ENSMUSG00000025369	ProperStrand	16	4	-inf
chr4	149089795	149100964	protein_coding	Tmem201	utr3	ENSMUSG00000044700	ProperStrand	60	chr16	23111372	23111466	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-2.4225
chr10	41644311	41644329	protein_coding	Armc2	exon	ENSMUSG00000071324	ProperStrand	281	chr7	123476731	123476772	snoRNA	ENSMUSG00000064741_Snord14a	.	ENSMUSG00000064741	ProperStrand	83	1	-9.5671
chr19	46138290	46138360	protein_coding	Pprc1	exon	ENSMUSG00000055491	ProperStrand	143	chr18	35714156	35714246	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-1.9433
chr9	58547119	58547136	protein_coding	2410076I21Rik	intron	ENSMUSG00000074269	ProperStrand	91	chr4	131865866	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.1658
chr17	32453268	32453284	protein_coding	Akap8	exon	ENSMUSG00000024045	ProperStrand	339	chrX	71517822	71517954	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-3.2362
chr2	121319646	121319693	protein_coding	Mfap1a	utr3	ENSMUSG00000068479	ProperStrand	14	chr9	120037990	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-7.6016
chr15	98350146	98350167	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	chr4	116828399	116828453	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-0.7282
chr5	36806752	36806770	lincRNA	2210406O10Rik	intron	ENSMUSG00000039563	NonProperStrand	3	chr9	120039585	120039675	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-9.5119
chr2	32162200	32162216	protein_coding	Golga2	utr3	ENSMUSG00000002546	NonProperStrand	35	chr1	11209279	11209333	protein_coding	Prex2	intron	ENSMUSG00000048960	ProperStrand	12	2	-19.8405
chr8	122470487	122470577	protein_coding	Usp10	intron	ENSMUSG00000031826	ProperStrand	98	chr7	52378399	52378479	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	1	-7.5250
chr6	146595596	146595686	protein_coding	Med21	intron	ENSMUSG00000030291	ProperStrand	4	chr11	97642963	97643043	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	4	-inf
chr4	155550431	155550526	protein_coding	Agrn	exon	ENSMUSG00000041936	NonProperStrand	7	chr15	98350202	98350273	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-9.1140
chr8	73288933	73290429	protein_coding	Ifi30	exon	ENSMUSG00000031838	ProperStrand	40	chr7	117166761	117166841	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-5.6059
chr8	14894732	14894812	protein_coding	Cln8	exon	ENSMUSG00000026317	ProperStrand	5	chr18	33954853	33954943	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-8.5187
chr19	5509134	5509200	protein_coding	Snx32	intron	ENSMUSG00000056185	ProperStrand	4	chr17	24857717	24857807	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	3	-18.4471
chr18	62676673	62676747	protein_coding	Fbxo38	exon	ENSMUSG00000042211	ProperStrand	18	chr7	52381718	52381789	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	3	-19.6175
chr16	57391758	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr6	134097815	134097831	protein_coding	Etv6	intron	ENSMUSG00000030199	NonProperStrand	77	1	-7.2959
chr3	34549491	34549591	protein_coding	Sox2	exon	ENSMUSG00000074637	ProperStrand	299	chr2	26494708	26494759	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-1.4466
chr10	75322915	75322950	protein_coding	Mif	utr5	ENSMUSG00000033307	ProperStrand	146	chr11	77995201	77995231	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-4.4569
chr17	28465990	28466406	protein_coding	Rpl10a	exon	ENSMUSG00000037805	NonProperStrand	1	chr9	15119693	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	NonProperStrand	21	1	-inf
chr4	106259344	106259475	protein_coding	Dhcr24	utr3	ENSMUSG00000034926	ProperStrand	94	chr1	88247742	88247765	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-4.2361
chr12	32890784	32890800	protein_coding	Pik3cg	exon	ENSMUSG00000020573	ProperStrand	12	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-12.6507
chr11	69728826	69729146	protein_coding	Gps2	exon	ENSMUSG00000023170	ProperStrand	2	chr7	52378397	52378487	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	1	-15.9827
chr1	54802772	54802791	protein_coding	Ankrd44	intron	ENSMUSG00000052331	NonProperStrand	8	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.4974
chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr8	47028009	47028025	protein_coding	Ccdc110	exon	ENSMUSG00000071104	NonProperStrand	6	1	-11.1900
chr3	94683725	94683800	protein_coding	Pogz	exon	ENSMUSG00000038902	ProperStrand	65	chr7	52713368	52713458	protein_coding	Ftl1	utr3	ENSMUSG00000050708	ProperStrand	807	1	-7.9567
chr17	56753061	56753343	protein_coding	Rpl36	exon	ENSMUSG00000057863	ProperStrand	62	chr11	62416592	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-5.1027
chr4	147520015	147520068	protein_coding	Fbxo6	utr3	ENSMUSG00000055401	ProperStrand	26	chr16	23111458	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-6.8669
chr13	21809886	21809934	protein_coding	Hist1h3h	exon	ENSMUSG00000069312	ProperStrand	10	chr4	131908768	131908858	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-7.3579
chr5	88984034	88984124	protein_coding	Utp3	exon	ENSMUSG00000070697	ProperStrand	8	chr16	23111377	23111457	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.8232
chr1	89105750	89105766	protein_coding	Chrng	exon	ENSMUSG00000026253	NonProperStrand	130	chr1	88252838	88252901	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-5.1252
chr14	72301755	72301771	SINE	B4	B4	chr14B472301692	NonProperStrand	99	chr12	112501982	112502030	protein_coding	Traf3	utr3	ENSMUSG00000021277	ProperStrand	39	1	-13.1758
chr5	37186714	37186752	protein_coding	Mrfap1	utr3	ENSMUSG00000055302	ProperStrand	62	chr17	24857815	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.2421
chr2	180377099	180377116	protein_coding	Tcfl5	exon	ENSMUSG00000038932	NonProperStrand	4	chr2	145076803	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-13.3910
chr11	75486588	75486619	protein_coding	Myo1c	utr3	ENSMUSG00000017774	ProperStrand	38	chr4	36354419	36354439	protein_coding	Lingo2	intron	ENSMUSG00000045083	ProperStrand	17	1	-16.8950
chr7	4745162	4745689	protein_coding	Rpl28	exon	ENSMUSG00000030432	ProperStrand	220	chr18	33954838	33954918	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	3	-4.0196
chr7	133520549	133520566	protein_coding	Spns1	exon	ENSMUSG00000030741	NonProperStrand	16	chr13	46862888	46863028	snoRNA	ENSMUSG00000064558_SNORA55	.	ENSMUSG00000064558	ProperStrand	187	1	-13.7232
chr4	47052550	47052567	protein_coding	Anks6	exon	ENSMUSG00000066191	NonProperStrand	10	chr18	33954817	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-11.4546
chr11	112660201	112660218	lincRNA	Gm11681	exon	ENSMUSG00000075437	NonProperStrand	12	chrX	71174638	71175040	protein_coding	Renbp	exon	ENSMUSG00000031387	ProperStrand	6	1	-19.9654
chr3	88715213	88715230	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr19	8799579	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-1.2862
chr8	127398155	127398190	protein_coding	Gnpat	exon	ENSMUSG00000031985	ProperStrand	20	chr9	30235085	30235101	protein_coding	Snx19	exon	ENSMUSG00000031993	ProperStrand	353	1	-11.9904
chrX	84483699	84483716	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr1	89681177	89681323	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	2	-2.0833
chr10	6063958	6063976	protein_coding	Akap12	intron	ENSMUSG00000038587	ProperStrand	1008	chr11	95142824	95142944	protein_coding	Myst2	exon	ENSMUSG00000038909	ProperStrand	56	1	-7.8135
chr3	88899542	88899558	protein_coding	Fdps	exon	ENSMUSG00000059743	NonProperStrand	17	chr6	115757999	115758047	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-7.9927
chrX	110325785	110325802	LINE	L1_Mus4	L1	chrXL1_Mus4110321666	ProperStrand	1	chr9	120038467	120038528	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-inf
chr8	112363201	112363275	snoRNA	ENSMUSG00000077549_Snord71	.	ENSMUSG00000077549	ProperStrand	196	chr8	73419657	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-2.3481
chr12	53699424	53699514	LINE	Lx2B	L1	chr12Lx2B53699170	ProperStrand	1	chr4	139835997	139836087	Simple_repeat	(CAGG)n	Simple_repeat	chr4(CAGG)n139835896	ProperStrand	1	1	-inf
chr8	108660348	108660364	lincRNA	1810019D21Rik	intron	ENSMUSG00000086390	ProperStrand	1	chr4	131865855	131865966	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr16	48437396	48437438	protein_coding	Morc1	exon	ENSMUSG00000022652	ProperStrand	28	chr17	35299507	35299607	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-6.2728
chr2	91408317	91408407	protein_coding	Ckap5	exon	ENSMUSG00000040549	ProperStrand	53	chr14	76372347	76372427	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	1	-9.2398
chr11	69761592	69761609	protein_coding	Slc2a4	utr5	ENSMUSG00000018566	NonProperStrand	2	chr1	162965531	162965554	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-10.5602
chr5	130535682	130535753	protein_coding	Crcp	utr3	ENSMUSG00000025532	ProperStrand	6	chr7	53493835	53493851	protein_coding	Ush1c	utr5	ENSMUSG00000030838	NonProperStrand	62	2	-inf
chr6	124716591	124716611	protein_coding	Eno2	exon	ENSMUSG00000004267	NonProperStrand	1	chr5	108336363	108336417	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-inf
chr7	26472435	26472451	protein_coding	Tgfb1	utr5	ENSMUSG00000002603	NonProperStrand	154	chr19	41841695	41841741	protein_coding	Arhgap19	utr3	ENSMUSG00000025154	ProperStrand	34	1	-12.5687
chr11	80040796	80046935	protein_coding	Rhot1	exon	ENSMUSG00000017686	ProperStrand	40	chr9	120037971	120038051	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-5.4940
chr19	4150525	4150591	protein_coding	Coro1b	exon	ENSMUSG00000024835	ProperStrand	13	chr16	23110495	23110527	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.3353
chr2	31646209	31646261	protein_coding	Abl1	exon	ENSMUSG00000026842	ProperStrand	131	chr8	32260338	32260374	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-3.1734
chr7	30231490	30231593	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	chr3	89761777	89761904	protein_coding	Atp8b2	exon	ENSMUSG00000060671	ProperStrand	140	1	-7.1577
chr11	75578358	75578436	protein_coding	Ywhae	utr3	ENSMUSG00000020849	ProperStrand	176	chr7	116663634	116663724	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-1.8203
chr1	165983749	165983765	protein_coding	Sele	exon	ENSMUSG00000026582	NonProperStrand	31	chr3	116337898	116339236	protein_coding	Hiat1	exon	ENSMUSG00000089911	ProperStrand	20	1	-16.7691
chr2	69542899	69542941	protein_coding	Fastkd1	intron	ENSMUSG00000027086	ProperStrand	9	chr7	67125763	67125829	snoRNA	ENSMUSG00000089375_Snord107	.	ENSMUSG00000089375	ProperStrand	451	4	-inf
chr1	168239525	168239541	protein_coding	Ildr2	exon	ENSMUSG00000040612	ProperStrand	103	chr11	106362638	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-6.3336
mmu-miR-6240	4	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr17	30777376	30777396	protein_coding	Dnahc8	intron	ENSMUSG00000033826	NonProperStrand	40	1	-6.7062
chr17	31720645	31720677	protein_coding	Pknox1	utr5	ENSMUSG00000006705	ProperStrand	110	chr19	8800395	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-2.4532
chr18	36841413	36841611	protein_coding	Slc35a4	utr5	ENSMUSG00000033272	ProperStrand	10	chr16	23111389	23111469	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.3721
chr6	93127321	93127338	lincRNA	9530026P05Rik	intron	ENSMUSG00000087573	ProperStrand	51	chr9	44190091	44190581	protein_coding	Hyou1	exon	ENSMUSG00000032115	ProperStrand	145	1	-11.8697
chr8	12848841	12849843	protein_coding	Atp11a	exon	ENSMUSG00000031441	ProperStrand	635	chr5	111121104	111121184	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	34	-19.9680
chr10	122633836	122633857	protein_coding	Usp15	intron	ENSMUSG00000020124	ProperStrand	24	chr10	23505549	23505623	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-9.3952
chr15	44426138	44426437	protein_coding	Pkhd1l1	exon	ENSMUSG00000038725	NonProperStrand	1	chr15	34370545	34370624	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-inf
chr6	86597205	86597221	protein_coding	Mxd1	utr3	ENSMUSG00000001156	NonProperStrand	40	chr2	26494776	26494827	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.8534
chr2	120361273	120361373	protein_coding	Zfp106	exon	ENSMUSG00000027288	ProperStrand	199	chr11	69480804	69480842	protein_coding	Eif4a1	utr3	ENSMUSG00000059796	ProperStrand	108	1	-9.7286
chr5	54389949	54389967	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	chr4	149622668	149622713	protein_coding	Eno1	utr3	ENSMUSG00000063524	ProperStrand	432	1	-6.8459
chr11	112905739	112905755	lincRNA	2610035D17Rik	exon	ENSMUSG00000087259	ProperStrand	30	chr4	132394372	132394418	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	1	-10.5363
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr11	62416954	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	3	-1.0814
chr7	108440949	108440967	protein_coding	Atg16l2	intron	ENSMUSG00000047767	ProperStrand	121	chr5	108336372	108336495	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-3.5559
chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	chr2	22445090	22445108	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-4.6094
chr14	31985000	31985019	protein_coding	Nisch	exon	ENSMUSG00000021910	ProperStrand	125	chr10	21322973	21322990	protein_coding	1700020N01Rik	intron	ENSMUSG00000050844	ProperStrand	12	1	-15.1164
chr15	100311922	100311938	protein_coding	Csrnp2	utr3	ENSMUSG00000044636	NonProperStrand	60	chr4	131908236	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.4187
chr4	21793083	21796684	protein_coding	Sfrs18	exon	ENSMUSG00000028248	ProperStrand	36	chr17	24857815	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.1916
chr16	56006948	56007034	protein_coding	Rpl24	exon	ENSMUSG00000022601	ProperStrand	149	chr1	162967493	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-1.9055
chr11	93954887	93958565	protein_coding	Spag9	exon	ENSMUSG00000020859	ProperStrand	23	chr1	102076758	102076791	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	1	-11.3753
chr4	45829234	45829250	protein_coding	Igfbpl1	exon	ENSMUSG00000035551	NonProperStrand	15	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.9503
chr7	138021253	138021320	protein_coding	Plekha1	utr5	ENSMUSG00000040268	ProperStrand	15	chr4	131908810	131908903	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.5353
chr6	142211245	142214830	protein_coding	Slco1a5	exon	ENSMUSG00000063975	NonProperStrand	38	chr9	15119287	15119394	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-6.0042
chr15	25749649	25749666	DNA	URR1B	MER1_type	chr15URR1B25749613	ProperStrand	1	chr12	83473382	83473422	protein_coding	Sipa1l1	exon	ENSMUSG00000042700	ProperStrand	84	1	-inf
chr11	106111074	106114225	protein_coding	Ftsj3	exon	ENSMUSG00000020706	ProperStrand	64	chr3	123210870	123210966	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-3.5617
chr1	13556217	13556279	protein_coding	Tram1	utr3	ENSMUSG00000025935	ProperStrand	28	chr16	23110912	23110961	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.1386
chr8	88062727	88062817	protein_coding	Dnaja2	utr3	ENSMUSG00000031701	ProperStrand	39	chr19	8800375	8800455	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-4.3397
chr6	47738067	47738139	misc_RNA	Y_RNA	.	ENSMUSG00000065701	ProperStrand	129	chr10	23505190	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-3.5388
chr14	31382174	31382274	protein_coding	Tkt	exon	ENSMUSG00000021957	ProperStrand	160	chr19	8798486	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-3.3586
chr17	68083087	68083103	protein_coding	Lama1	intron	ENSMUSG00000032796	NonProperStrand	26	chr4	131865916	131865977	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.1929
chr1	9737097	9737187	protein_coding	Vcpip1	exon	ENSMUSG00000045210	ProperStrand	34	chr9	120038564	120038644	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	9	-19.0915
chr15	76285691	76285781	protein_coding	Bop1	exon	ENSMUSG00000022557	ProperStrand	26	chr5	130300470	130300550	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.0304
chr2	122065731	122065772	protein_coding	Sord	intron	ENSMUSG00000027227	ProperStrand	8	chr7	118219575	118219641	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	5	-19.3389
chr5	144085813	144085829	protein_coding	Zdhhc4	exon	ENSMUSG00000001844	NonProperStrand	14	chr16	23110454	23110523	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.1866
chr4	12159988	12160004	pseudogene	Gm11847	.	ENSMUSG00000060989	NonProperStrand	2	chr7	116663633	116663749	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-inf
chr15	81110991	81111009	SINE	ID4	ID	chr15ID481110956	ProperStrand	272	chr10	76537107	76537138	protein_coding	Col18a1	exon	ENSMUSG00000001435	ProperStrand	287	1	-7.1609
chr5	34894211	34894228	protein_coding	Sh3bp2	utr5	ENSMUSG00000054520	ProperStrand	43	chr4	116828378	116828429	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-9.0512
chr11	3426352	3426368	protein_coding	Smtn	exon	ENSMUSG00000020439	ProperStrand	222	chr18	24971346	24971381	protein_coding	Fhod3	intron	ENSMUSG00000034295	ProperStrand	23	1	-12.6307
chr4	41605871	41605909	protein_coding	Cntfr	exon	ENSMUSG00000028444	ProperStrand	8	chr9	15119667	15119767	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-6.5261
chr8	124993639	124993739	protein_coding	Rnf166	intron	ENSMUSG00000014470	ProperStrand	2	chr3	153575090	153575113	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	1	-15.9958
chr2	134617976	134617994	protein_coding	Plcb1	intron	ENSMUSG00000051177	NonProperStrand	10	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-8.8233
chr9	63868722	63868739	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	chr4	131865855	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	9	-1.3088
chr18	75161126	75161173	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	chr5	121655016	121655097	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-1.1165
chr10	77526183	77526283	protein_coding	Dnmt3l	utr3	ENSMUSG00000000730	ProperStrand	37	chr17	35088957	35089018	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-6.8254
chr17	35972153	35972169	protein_coding	Tubb5	exon	ENSMUSG00000001525	NonProperStrand	5	chr16	11144177	11144277	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	1	-15.6228
chr1	152268927	152269668	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	chr19	11857619	11859888	protein_coding	Stx3	exon	ENSMUSG00000041488	ProperStrand	37	1	-9.8814
chr11	98019160	98019246	protein_coding	Med1	exon	ENSMUSG00000018160	ProperStrand	23	chr11	97642952	97642973	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.2234
chr9	83732872	83732943	protein_coding	Ttk	exon	ENSMUSG00000038379	ProperStrand	36	chr1	9932560	9932587	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-8.7544
chr8	108216797	108216816	protein_coding	Rltpr	exon	ENSMUSG00000050357	NonProperStrand	22	chr9	72816966	72816982	protein_coding	Dyx1c1	exon	ENSMUSG00000092192	ProperStrand	34	1	-16.4669
chr17	36018410	36018617	protein_coding	Dhx16	exon	ENSMUSG00000024422	ProperStrand	28	chr7	87910246	87911824	protein_coding	Iqgap1	exon	ENSMUSG00000030536	ProperStrand	43	1	-15.5304
chr6	120279354	120279450	protein_coding	Ccdc77	exon	ENSMUSG00000030177	ProperStrand	17	chr11	105695449	105695467	protein_coding	Tanc2	intron	ENSMUSG00000053580	ProperStrand	13	1	-18.8224
chr3	116496534	116496634	protein_coding	Agl	exon	ENSMUSG00000033400	ProperStrand	18	chr9	15119738	15119768	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.8766
chr7	74516861	74516877	protein_coding	Mef2a	intron	ENSMUSG00000030557	ProperStrand	18	chr2	130101985	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-7.7579
chr8	47293758	47293792	protein_coding	Slc25a4	exon	ENSMUSG00000031633	ProperStrand	53	chrX	143918832	143918910	snoRNA	ENSMUSG00000084421_SNORA35	.	ENSMUSG00000084421	ProperStrand	293	1	-10.3846
mmu-miR-690	0	22	miRNA	mmu-miR-690	.	mmu-miR-690	ProperStrand	63	chr8	98269993	98270083	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-5.4462
chr7	31663114	31664217	protein_coding	Cd22	utr5	ENSMUSG00000030577	NonProperStrand	128	chr1	63225577	63225656	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-5.1825
chr15	75758880	75758925	protein_coding	Tsta3	exon	ENSMUSG00000022570	ProperStrand	38	chr11	69481383	69481473	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	5	-16.7443
chr3	104232110	104232127	LINE	L1MB4	L1	chr3L1MB4104231721	NonProperStrand	1	chr1	187251745	187251779	protein_coding	Eprs	exon	ENSMUSG00000026615	ProperStrand	149	1	-inf
chr3	94987388	94987456	protein_coding	Gabpb2	utr3	ENSMUSG00000038766	ProperStrand	39	chr3	123210854	123210880	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.7988
chr19	10270637	10270737	protein_coding	Fads1	utr3	ENSMUSG00000010663	ProperStrand	21	chr16	23110906	23110972	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.5481
chr7	29596382	29607143	protein_coding	Hnrnpl	intron	ENSMUSG00000015165	ProperStrand	150	chr16	23110909	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	8	-1.7991
chr7	31307997	31308065	protein_coding	Arhgap33	exon	ENSMUSG00000036882	NonProperStrand	2	chr12	103402744	103402761	protein_coding	Slc24a4	intron	ENSMUSG00000041771	ProperStrand	9	1	-inf
chr5	120434429	120434448	LTR	ORR1E	MaLR	chr5ORR1E120434253	NonProperStrand	1	chr19	10680065	10680121	protein_coding	Ddb1	utr5	ENSMUSG00000024740	ProperStrand	304	1	-inf
chr12	29316523	29316623	protein_coding	Rps7	exon	ENSMUSG00000061477	ProperStrand	129	chr9	15119706	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.4080
chr9	95525014	95525035	antisense	Gm16126	.	ENSMUSG00000086585	NonProperStrand	229	chr1	162965980	162966037	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-1.3669
chr17	34702540	34702640	protein_coding	Notch4	exon	ENSMUSG00000015468	ProperStrand	11	chr17	24665437	24665467	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-8.3441
chr8	73419696	73419786	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	chr6	86353920	86353963	tRNA	tRNA317-GlyCCC	.	502420	ProperStrand	1	1	-inf
chr15	81195800	81195890	protein_coding	St13	utr3	ENSMUSG00000022403	ProperStrand	59	chr6	115758052	115758132	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-5.5048
chr3	96528194	96528294	snoRNA	ENSMUSG00000065669_SNORA5	.	ENSMUSG00000065669	ProperStrand	180	chr7	67123706	67123738	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	1	-7.3464
chr11	119982347	119982365	protein_coding	Slc38a10	intron	ENSMUSG00000061306	ProperStrand	91	chr7	116664793	116664893	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.8616
chr7	134341340	134341357	protein_coding	Tbc1d10b	utr3	ENSMUSG00000042492	ProperStrand	187	chr4	116826716	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-4.5648
chr17	42952894	42952984	protein_coding	Cd2ap	exon	ENSMUSG00000061665	ProperStrand	44	chr11	69483184	69483264	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.9921
chr17	23958514	23960695	protein_coding	Srrm2	intron	ENSMUSG00000039218	ProperStrand	521	chr10	110918549	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-0.8350
chr5	3693225	3693241	protein_coding	Ankib1	exon	ENSMUSG00000040351	NonProperStrand	98	chr4	131908236	131908318	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-1.6136
chr17	24856622	24856722	protein_coding	Rps2	intron	ENSMUSG00000044533	ProperStrand	373	chr9	120037899	120037976	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	NonProperStrand	19	1	-11.9846
chr7	29183839	29183879	protein_coding	Paf1	exon	ENSMUSG00000003437	ProperStrand	8	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-11.0449
chr5	123516817	123516907	lincRNA	Gm17627	intron	ENSMUSG00000066418	NonProperStrand	3	chrX	20192463	20192543	protein_coding	Ndufb11	utr3	ENSMUSG00000031059	ProperStrand	4	1	-inf
chr10	36706544	36706610	protein_coding	Hdac2	intron	ENSMUSG00000019777	ProperStrand	36	chr2	32837255	32837271	protein_coding	Slc2a8	exon	ENSMUSG00000026791	ProperStrand	26	1	-16.0197
chr16	5256015	5256031	protein_coding	Fam86	utr5	ENSMUSG00000022544	ProperStrand	231	chr1	93263065	93263081	protein_coding	Fam132b	exon	ENSMUSG00000047443	NonProperStrand	98	1	-9.6254
chr4	20548793	20548811	protein_coding	Nkain3	intron	ENSMUSG00000055761	ProperStrand	34	chr2	130101241	130101279	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-7.7247
chr6	93765818	93862891	protein_coding	Magi1	intron	ENSMUSG00000045095	NonProperStrand	47	chr19	8963031	8963131	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.6924
chr16	4051690	4051780	protein_coding	Trap1	intron	ENSMUSG00000005981	ProperStrand	25	chr2	28549631	28549711	protein_coding	1700026L06Rik	intron	ENSMUSG00000026809	NonProperStrand	1	1	-inf
chr5	100855904	100855943	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr17	39985624	39985724	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	2	-1.0192
chr5	104868487	104869255	protein_coding	Spp1	exon	ENSMUSG00000029304	ProperStrand	52	chr5	121655031	121655094	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.0158
chr2	59680988	59681043	protein_coding	Tanc1	exon	ENSMUSG00000035168	ProperStrand	80	chr17	24857783	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.8304
chr5	124819183	124823374	protein_coding	Sbno1	utr3	ENSMUSG00000038095	ProperStrand	134	chr19	8963086	8963180	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-3.3774
chrX	98836019	98836072	protein_coding	Ogt	intron	ENSMUSG00000034160	ProperStrand	49	chr11	69483249	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.8009
chr4	131908356	131908460	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	1	-2.9395
chr15	99543558	99543600	protein_coding	Smarcd1	utr3	ENSMUSG00000023018	ProperStrand	43	chr2	166890543	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-8.2243
chr11	83318273	83318289	protein_coding	Taf15	exon	ENSMUSG00000020680	ProperStrand	60	chr19	8963030	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.2748
chr13	56962398	56962414	protein_coding	Trpc7	exon	ENSMUSG00000021541	ProperStrand	50	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.6110
chr7	52309977	52309993	protein_coding	Prrg2	exon	ENSMUSG00000007837	NonProperStrand	281	chr2	63936035	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-4.8286
chr3	30531829	30531919	protein_coding	Lrrc34	intron	ENSMUSG00000027702	ProperStrand	3	chr4	131865381	131865461	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-10.2531
chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr8	79424009	79424027	protein_coding	Nr3c2	utr5	ENSMUSG00000031618	ProperStrand	23	1	-8.3759
chr11	51551244	51551334	protein_coding	Sec24a	intron	ENSMUSG00000036391	ProperStrand	42	chr18	35716789	35716878	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-4.8567
chr5	118053133	118053150	protein_coding	Ksr2	intron	ENSMUSG00000061578	ProperStrand	36	chr16	23111690	23111753	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.7618
chr14	48315200	48320299	protein_coding	Ktn1	exon	ENSMUSG00000021843	ProperStrand	64	chr19	39917317	39917333	protein_coding	Cyp2c69	utr3	ENSMUSG00000092008	NonProperStrand	83	1	-12.5309
chr3	5251161	5251179	protein_coding	Zfhx4	intron	ENSMUSG00000025255	ProperStrand	7	chr9	15118561	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	1	-13.7687
chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	chr7	52382752	52382832	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-1.9706
chr11	98551963	98552241	protein_coding	Psmd3	exon	ENSMUSG00000017221	ProperStrand	51	chr4	140112402	140112471	protein_coding	Arhgef10l	intron	ENSMUSG00000040964	ProperStrand	15	1	-16.5118
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	4	-9.3979
chr11	68213900	68213970	protein_coding	Ntn1	utr5	ENSMUSG00000020902	ProperStrand	44	chr12	88778645	88778735	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	7	-inf
chr6	115758046	115758119	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr10	90644832	90644915	tRNA	tRNA856-AspGTC	.	150228	ProperStrand	65	1	-5.3158
chr8	94152173	94152193	antisense	Gm3235	.	ENSMUSG00000090778	ProperStrand	11	chr6	115758041	115758119	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-8.8917
chr16	36071984	36072000	protein_coding	Ccdc58	utr5	ENSMUSG00000075229	NonProperStrand	55	chr14	33005179	33005225	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-4.1578
chr8	3803251	3803331	misc_RNA	RNaseP_nuc	.	ENSMUSG00000088025	ProperStrand	328	chr1	89673613	89673703	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	9	-11.5213
chr6	92081357	92081421	protein_coding	Nr2c2	intron	ENSMUSG00000005893	ProperStrand	101	chr9	15118327	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-4.4648
chr11	106362304	106362322	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	chr1	172975116	172975189	tRNA	tRNA699-GlyGCC	.	315635	ProperStrand	660	3	-4.4392
chr3	154283644	154283728	protein_coding	Cryz	intron	ENSMUSG00000028199	ProperStrand	5	chr12	60141481	60141509	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-11.9762
chr15	81110991	81111009	SINE	ID4	ID	chr15ID481110956	ProperStrand	272	chr9	64023242	64023276	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	1	-5.4584
chr11	74466082	74466182	protein_coding	1300001I01Rik	intron	ENSMUSG00000020741	ProperStrand	76	chr7	5014564	5014610	protein_coding	U2af2	intron	ENSMUSG00000030435	ProperStrand	103	1	-11.7529
chr1	182797848	182797929	protein_coding	BC031781	utr3	ENSMUSG00000038806	ProperStrand	64	chr16	23110527	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.3523
chr9	15123941	15123965	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	NonProperStrand	100	chr2	26494775	26494824	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-3.9667
chr14	49349645	49349735	SINE	B1F	Alu	chr14B1F49349649	NonProperStrand	1	chr14	49349496	49349574	SINE	ID_B1	B4	chr14ID_B149349496	NonProperStrand	1	1	-inf
chr2	104628882	104656123	protein_coding	Qser1	exon	ENSMUSG00000074994	ProperStrand	22	chr16	23110895	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-4.4664
chr6	83559285	83559349	LTR	RMER15	ERVL	chr6RMER1583559029	ProperStrand	3	chr11	69483205	69483263	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-8.5256
chr13	97429311	97429327	protein_coding	Hmgcr	exon	ENSMUSG00000021670	ProperStrand	56	chr4	131908687	131908773	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-2.5232
chr2	90235315	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	133249773	133249789	protein_coding	Arid1a	exon	ENSMUSG00000007880	NonProperStrand	7	1	-8.8025
chr15	100358959	100358975	protein_coding	Tfcp2	exon	ENSMUSG00000009733	NonProperStrand	77	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-4.7293
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr5	135097107	135097158	protein_coding	Eif4h	utr3	ENSMUSG00000040731	ProperStrand	46	1	-8.5068
chr12	82049283	82049334	protein_coding-noncoding	Srsf5	utr5	ENSMUSG00000021134	ProperStrand	10	chr7	118219574	118219638	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-7.7388
chr4	140374497	140374514	protein_coding	Padi1	intron	ENSMUSG00000025329	ProperStrand	11	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-8.6239
chr7	125262707	125262807	protein_coding	Arl6ip1	utr3	ENSMUSG00000030654	ProperStrand	57	chr6	59304307	59304323	protein_coding	Gprin3	exon	ENSMUSG00000045441	NonProperStrand	1	1	-inf
chr17	13115751	13115791	protein_coding	Tcp1	intron	ENSMUSG00000068039	ProperStrand	116	chr17	13115655	13115748	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	4	-18.2574
chr4	14139345	14211010	SINE	RSINE1	B4	chr4RSINE114198027	NonProperStrand	1	chr16	23110913	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
mmu-miR-6240	4	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr3	128921960	128921978	protein_coding	Pitx2	utr3	ENSMUSG00000028023	NonProperStrand	6	1	-10.6285
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr18	12172461	12172477	protein_coding	6030446N20Rik	intron	ENSMUSG00000049411	ProperStrand	235	1	-3.3067
chr7	34942364	34943018	protein_coding	Uba2	exon	ENSMUSG00000052997	ProperStrand	165	chr11	62416575	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-3.2604
chrX	56474201	56474218	protein_coding	Fgf13	intron	ENSMUSG00000031137	NonProperStrand	10	chr13	23853843	23853909	protein_coding	Hist1h3a	exon	ENSMUSG00000069265	ProperStrand	12	1	-21.0058
chr11	100235459	100235685	protein_coding	Jup	exon	ENSMUSG00000001552	ProperStrand	123	chr11	4073082	4073107	protein_coding	Sf3a1	exon	ENSMUSG00000002129	ProperStrand	78	1	-11.3446
chr10	23505029	23505312	protein_coding	Rps12	intron	ENSMUSG00000061983	ProperStrand	309	chr10	23505150	23505282	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	14	-7.5146
chr9	64023677	64023736	snoRNA	ENSMUSG00000064918_SNORD18	.	ENSMUSG00000064918	ProperStrand	370	chr15	98350145	98350183	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-1.5633
chr12	36219400	36219416	protein_coding	Ahr	utr5	ENSMUSG00000019256	NonProperStrand	64	chr1	162965980	162965999	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-3.4843
chr4	128688585	128688608	protein_coding	Ak2	utr3	ENSMUSG00000028792	ProperStrand	43	chr9	30961076	30965337	protein_coding	Aplp2	exon	ENSMUSG00000031996	ProperStrand	172	3	-22.2586
chr11	45723144	45723160	protein_coding	Clint1	utr3	ENSMUSG00000006169	NonProperStrand	273	chr4	116826715	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-3.8522
chr7	116663504	116664009	protein_coding	Rpl27a	exon	ENSMUSG00000046364	ProperStrand	149	chr16	23111375	23111465	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-0.7199
chr12	85022549	85022566	protein_coding	Rbm25	utr3	ENSMUSG00000010608	ProperStrand	42	chr7	116663709	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.1409
chr11	115285809	115285826	protein_coding	Kctd2	exon	ENSMUSG00000016940	NonProperStrand	5	chr1	183027220	183027280	protein_coding	Nvl	intron	ENSMUSG00000026516	ProperStrand	89	3	-inf
chr2	22444910	22444961	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	chr17	35089181	35089229	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	3	-2.7036
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	5797877	5797967	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	3	-1.1110
chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	chr18	75160711	75160753	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	1	-4.4610
chr6	71390139	71390156	protein_coding	Rmnd5a	utr5	ENSMUSG00000002222	ProperStrand	38	chr7	116663737	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.3231
chr16	87700688	87700705	protein_coding	Bach1	intron	ENSMUSG00000025612	NonProperStrand	20	chr17	24843090	24844549	protein_coding	Tbl3	utr5	ENSMUSG00000040688	ProperStrand	42	1	-16.2263
chr11	102294588	102294606	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr12	92811914	92812014	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	2	-7.0807
chr6	120432385	120432401	protein_coding	Il17ra	exon	ENSMUSG00000002897	ProperStrand	61	chr3	87779730	87779748	protein_coding	Nes	exon	ENSMUSG00000004891	ProperStrand	3	1	-21.4093
chr11	53277033	53277049	antisense	Gm12212	.	ENSMUSG00000085707	ProperStrand	5	chr8	73419663	73419774	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-13.3027
chr9	111592583	111592601	protein_coding	Stac	exon	ENSMUSG00000032502	ProperStrand	22	chr9	120039545	120039657	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-5.2308
chr5	121850222	121850239	protein_coding	Naa25	intron	ENSMUSG00000042719	ProperStrand	95	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-10.7620
chr4	24825818	24828891	protein_coding	Ndufaf4	exon	ENSMUSG00000028261	ProperStrand	5	chr1	33828651	33828669	protein_coding	Zfp451	intron	ENSMUSG00000042197	NonProperStrand	393	1	-14.7081
chrX	20079605	20088225	protein_coding	Phf16	exon	ENSMUSG00000037315	ProperStrand	22	chr1	162966854	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-8.2684
chr5	121655028	121655151	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	chr3	153574629	153574653	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	1	-0.8524
chr1	133827680	133827780	protein_coding	Nucks1	exon	ENSMUSG00000026434	ProperStrand	59	chr7	118219574	118219601	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-4.2023
chr14	20598813	20622372	protein_coding	Nid2	exon	ENSMUSG00000021806	ProperStrand	372	chr11	62418017	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	4	-8.1273
chr5	29963799	29963817	protein_coding	Ube3c	intron	ENSMUSG00000039000	ProperStrand	48	chr16	23111726	23111826	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	NonProperStrand	47	1	-14.2611
chr10	91223600	91223619	LTR	RLTR12A	ERVK	chr10RLTR12A91223188	ProperStrand	4	chr11	106362327	106362365	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-11.4809
chr11	117584839	117593536	protein_coding	Tnrc6c	exon	ENSMUSG00000025571	ProperStrand	51	chr11	116938573	116938705	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	12	-inf
chr16	4021644	4021724	LINE	Lx6	L1	chr16Lx64021267	NonProperStrand	1	chr8	108260369	108260459	protein_coding	Gfod2	intron	ENSMUSG00000013150	ProperStrand	4	1	-inf
chr18	17137241	17137331	LINE	Lx	L1	chr18Lx17136672	NonProperStrand	1	chr8	58416863	58416953	LINE	Lx2	L1	chr8Lx258416814	NonProperStrand	1	1	-inf
chr11	106362586	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	chr18	33954816	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	5	-0.8739
chr9	67780302	67780338	protein_coding	Vps13c	exon	ENSMUSG00000035284	ProperStrand	69	chr18	35716684	35716756	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.9428
chr12	60141322	60141412	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	chr2	26766780	26766809	snoRNA	ENSMUSG00000065258_SNORD24	.	ENSMUSG00000065258	ProperStrand	130	1	-5.3106
chr7	19661962	19661978	protein_coding	Dmwd	exon	ENSMUSG00000030410	ProperStrand	41	chr10	80998007	81007575	protein_coding	Gna11	exon	ENSMUSG00000034781	ProperStrand	23	1	-16.0298
chr9	30236112	30236152	protein_coding	Snx19	exon	ENSMUSG00000031993	ProperStrand	353	chr19	8800376	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-0.7686
chr9	15118333	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	chr12	110874221	110874290	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	1	-0.8512
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	3	-2.2495
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr8	25718168	25718190	protein_coding	Adam18	intron	ENSMUSG00000031552	NonProperStrand	5	1	-11.0331
chr5	23357994	23358099	lincRNA	2700038G22Rik	intron	ENSMUSG00000086802	ProperStrand	5	chr9	78023110	78023148	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	1	-11.0066
chr8	11625539	11625606	protein_coding	Ankrd10	intron	ENSMUSG00000031508	ProperStrand	32	chr13	101553464	101553551	protein_coding	Ccnb1	exon	ENSMUSG00000041431	ProperStrand	39	1	-15.4276
chr14	76906306	76906339	protein_coding	Tsc22d1	exon	ENSMUSG00000022010	ProperStrand	86	chr11	69731121	69731419	protein_coding	Eif5a	exon	ENSMUSG00000078812	ProperStrand	164	1	-10.5722
chr4	132530099	132530116	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	chr5	110531487	110531546	protein_coding	Plcxd1	exon	ENSMUSG00000064247	NonProperStrand	1	1	-inf
chr19	46139821	46139848	protein_coding	Pprc1	exon	ENSMUSG00000055491	ProperStrand	143	chr6	56747574	56747591	protein_coding	Kbtbd2	utr5	ENSMUSG00000059486	ProperStrand	3	1	-17.8926
chr4	117895886	117896358	protein_coding	Ptprf	exon	ENSMUSG00000033295	ProperStrand	337	chr2	166776771	166776794	protein_coding	Stau1	exon	ENSMUSG00000039536	ProperStrand	8	1	-13.9936
chr10	13410335	13410358	protein_coding	Aig1	exon	ENSMUSG00000019806	ProperStrand	49	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-7.6383
chr3	153573528	153573597	snoRNA	ENSMUSG00000064731_Snord45b	.	ENSMUSG00000064731	ProperStrand	205	chr1	162968440	162968465	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-3.7208
chr18	59235910	59235926	protein_coding	A730017C20Rik	utr3	ENSMUSG00000050875	ProperStrand	1	chr6	145567397	145567797	protein_coding	Tuba3b	exon	ENSMUSG00000067338	ProperStrand	152	1	-inf
chr2	150780357	150780437	protein_coding	Ninl	intron	ENSMUSG00000068115	ProperStrand	51	chr4	116826700	116826766	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	2	-11.4295
chr16	59379342	59379432	LINE	L1Md_F2	L1	chr16L1Md_F259378856	ProperStrand	1	chr7	54441686	54441776	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-inf
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr19	8798484	8798553	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-4.4397
chr11	78103392	78103426	protein_coding	2610507B11Rik	exon	ENSMUSG00000010277	ProperStrand	246	chr2	30196202	30197238	protein_coding	Nup188	exon	ENSMUSG00000052533	ProperStrand	96	1	-9.5411
chr10	79756759	79756826	protein_coding	Rps15	utr3	ENSMUSG00000063457	ProperStrand	119	chr11	62416951	62417013	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-4.7114
chr9	62641762	62644507	protein_coding	Fem1b	exon	ENSMUSG00000032244	ProperStrand	111	chr16	23111389	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-1.1737
chr9	98477459	98477776	protein_coding	Copb2	exon	ENSMUSG00000032458	ProperStrand	33	chr6	83239250	83240777	protein_coding	Slc4a5	exon	ENSMUSG00000068323	ProperStrand	6	1	-18.8073
chr2	84527187	84527221	protein_coding	Med19	utr3	ENSMUSG00000027080	ProperStrand	22	chr4	131908689	131908796	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-10.1618
chr7	13516163	13516189	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr7	16677708	16678201	protein_coding	Zfp541	exon	ENSMUSG00000078796	ProperStrand	33	1	-9.8704
chr6	125422515	125444606	protein_coding	Cd9	exon	ENSMUSG00000030342	ProperStrand	81	chr11	69481375	69481465	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-2.6681
chr4	94167899	94167999	protein_coding	5830433M19Rik	exon	ENSMUSG00000028578	ProperStrand	5	chr12	58643588	58643607	protein_coding	Foxa1	exon	ENSMUSG00000035451	ProperStrand	25	1	-18.7681
chr4	131825994	131826094	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	chr11	51551273	51551333	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	2	-6.2929
chr4	132530098	132530117	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	chr17	13112450	13112530	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-1.3765
chr9	39358287	39358304	protein_coding	Olfr958	exon	ENSMUSG00000050853	NonProperStrand	266	chr11	62416597	62416640	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-4.2756
chr4	53873577	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	chr10	39978350	39978440	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	2	-3.0240
chr5	8429686	8429704	protein_coding	Slc25a40	intron	ENSMUSG00000054099	NonProperStrand	12	chr2	26494781	26494826	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-10.2021
chr6	47037848	47037871	protein_coding	Cntnap2	intron	ENSMUSG00000039419	ProperStrand	21	chr8	73419657	73419712	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-5.1207
chr1	91678618	91789559	protein_coding	Agap1	intron	ENSMUSG00000055013	ProperStrand	229	chr16	23111375	23111468	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	8	-3.8686
chr3	113842216	113842306	protein_coding	Col11a1	intron	ENSMUSG00000027966	ProperStrand	7	chr3	144985399	144985479	protein_coding	Col24a1	intron	ENSMUSG00000028197	NonProperStrand	8	1	-19.0879
chr3	97874955	97874971	protein_coding	Notch2	exon	ENSMUSG00000027878	NonProperStrand	6	chr7	117189864	117189920	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-10.9406
chr1	63095261	63095315	protein_coding	Ino80d	utr3	ENSMUSG00000040865	ProperStrand	70	chr18	35716700	35716790	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.9199
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr17	39985306	39985354	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-1.6707
chrX	162824185	162824201	protein_coding	Gpm6b	utr3	ENSMUSG00000031342	ProperStrand	4	chr11	106362638	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-13.0688
chr11	54683854	54683897	protein_coding	Hint1	utr3	ENSMUSG00000020267	ProperStrand	11	chr11	116535915	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	1	-9.3408
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr4	139198019	139198088	protein_coding	Aldh4a1	exon	ENSMUSG00000028737	ProperStrand	20	1	-11.0636
chr2	152106926	152107026	protein_coding	Csnk2a1	utr3	ENSMUSG00000074698	ProperStrand	91	chr16	23111453	23111501	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.7425
chr11	106643231	106643522	protein_coding	Ddx5	exon	ENSMUSG00000020719	ProperStrand	181	chr7	116664808	116664909	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-1.8073
chr2	90235290	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	44188458	44188548	snoRNA	ENSMUSG00000077391_SNORA12	.	ENSMUSG00000077391	ProperStrand	506	5	-5.9036
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr11	120455585	120455628	protein_coding	Alyref	utr3	ENSMUSG00000025134	ProperStrand	53	1	-8.8545
chr10	42298355	42298372	protein_coding	Nr2e1	intron	ENSMUSG00000019803	ProperStrand	32	chr7	52381737	52381762	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	2	-14.0487
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	17431107	17431124	protein_coding	Gcnt1	utr5	ENSMUSG00000038843	ProperStrand	11	1	-7.8469
chr18	38409775	38409791	lincRNA	1700086O06Rik	exon	ENSMUSG00000086988	NonProperStrand	28	chr1	102076759	102076792	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	1	-10.9744
chr10	80257606	80257642	protein_coding	Dot1l	utr3	ENSMUSG00000061589	ProperStrand	48	chr10	107800719	107800809	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	1	-8.5177
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr10	23505149	23505270	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	10	-1.8792
chr2	129998643	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-2.0710
chr19	9047511	9051810	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	chr11	101466265	101466345	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	1	-5.0793
chr15	8169062	8169101	protein_coding	2410089E03Rik	exon	ENSMUSG00000039801	ProperStrand	43	chr9	120038552	120038607	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	3	-9.0497
chr3	35725890	35725907	protein_coding	Atp11b	exon	ENSMUSG00000037400	NonProperStrand	18	chr5	74489595	74489676	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-6.1191
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr13	70776149	70776165	protein_coding	BC018507	intron	ENSMUSG00000034525	NonProperStrand	7	1	-13.1405
chr14	35123982	35124033	protein_coding	Glud1	utr5	ENSMUSG00000021794	ProperStrand	72	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-6.6213
chr7	20286756	20286843	protein_coding	Tomm40	utr3	ENSMUSG00000002984	ProperStrand	57	chr18	21054478	21054494	protein_coding	Trappc8	exon	ENSMUSG00000033382	ProperStrand	43	1	-14.0889
chr6	91123604	91123704	protein_coding	Hdac11	utr3	ENSMUSG00000034245	ProperStrand	3	chr11	99885311	99885327	protein_coding	Krt33b	exon	ENSMUSG00000057723	NonProperStrand	352	1	-16.1518
chr7	4745144	4745165	protein_coding	Rpl28	exon	ENSMUSG00000030432	ProperStrand	220	chr18	15221855	15221871	protein_coding	Kctd1	exon	ENSMUSG00000036225	ProperStrand	16	1	-13.3985
chr6	124911312	124911338	protein_coding	Cops7a	exon	ENSMUSG00000030127	ProperStrand	16	chr11	4820972	4820990	protein_coding	Thoc5	intron	ENSMUSG00000034274	ProperStrand	325	1	-12.6141
chr1	78459456	78459477	protein_coding	Farsb	exon	ENSMUSG00000026245	ProperStrand	40	chr2	26494708	26494800	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.8534
chr11	3150161	3150226	protein_coding	Drg1	utr3	ENSMUSG00000020457	ProperStrand	19	chr5	108334196	108334286	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	2	-11.4701
chr6	124762457	124762521	protein_coding	Tpi1	exon	ENSMUSG00000023456	ProperStrand	94	chr8	36529522	36529538	protein_coding	Eri1	utr3	ENSMUSG00000031527	NonProperStrand	97	1	-11.4461
chr15	85839199	85839216	protein_coding	Celsr1	intron	ENSMUSG00000016028	ProperStrand	56	chr11	33177942	33178000	protein_coding	Ranbp17	intron	ENSMUSG00000040594	ProperStrand	20	1	-15.6680
chr9	15130707	15130756	snoRNA	ENSMUSG00000077506_Scarna9	.	ENSMUSG00000077506	ProperStrand	148	chr3	123210898	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-0.7988
chr15	76734873	76735386	protein_coding	Rpl8	exon	ENSMUSG00000003970	ProperStrand	191	chr11	68886943	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	2	-3.7438
chr2	26493369	26493459	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr4	86232393	86232473	snoRNA	ENSMUSG00000088958_Scarna8	.	ENSMUSG00000088958	ProperStrand	366	1	-0.8587
chr10	127929171	127929289	protein_coding	Myl6	exon	ENSMUSG00000090841	ProperStrand	22	chr16	23110455	23110545	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.2978
chr2	26844907	26844924	protein_coding	Adamts13	exon	ENSMUSG00000014852	NonProperStrand	1	chr4	131908807	131908890	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-inf
chrX	7182489	7182506	protein_coding	Ccdc22	utr5	ENSMUSG00000031143	NonProperStrand	51	chr1	173041609	173041649	tRNA	tRNA710-ValCAC	.	1947416	ProperStrand	206	1	-11.1667
chr19	43579408	43579425	protein_coding	Got1	intron	ENSMUSG00000025190	NonProperStrand	147	chr17	39985197	39985245	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-4.2019
chr4	136129945	136129977	protein_coding	Kdm1a	exon	ENSMUSG00000036940	ProperStrand	83	chr9	15119646	15119712	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-3.7501
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr14	61398407	61398423	protein_coding	C1qtnf9	exon	ENSMUSG00000071347	ProperStrand	187	6	-13.8841
chr11	88208104	88208156	protein_coding	Msi2	exon	ENSMUSG00000069769	ProperStrand	159	chr18	35716685	35716775	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-0.7894
chr11	21457531	21458524	protein_coding	Mdh1	exon	ENSMUSG00000020321	ProperStrand	16	chr12	106269367	106269403	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	5	-20.8990
chr11	80707576	80707593	protein_coding	Accn1	exon	ENSMUSG00000020704	ProperStrand	69	chr10	23505151	23505262	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-2.0680
chr11	70796320	70796400	protein_coding	C1qbp	exon	ENSMUSG00000018446	ProperStrand	46	chr4	131865414	131865504	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-4.5072
chr8	77742558	77742574	protein_coding	Rasd2	exon	ENSMUSG00000034472	NonProperStrand	237	chr19	8799581	8799640	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-4.1023
chrX	110606785	110606875	protein_coding	Dach2	intron	ENSMUSG00000025592	ProperStrand	6	chrX	52957481	52957561	pseudogene	Gm16404	.	ENSMUSG00000081482	NonProperStrand	1	1	-inf
chr13	56996438	56996454	protein_coding	Trpc7	intron	ENSMUSG00000021541	ProperStrand	50	chr11	62416951	62416969	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-6.4033
chr11	69037669	69037685	protein_coding	Gucy2e	exon	ENSMUSG00000020890	NonProperStrand	99	chr2	130102054	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-4.3917
chr1	6864654	6864734	LINE	Lx6	L1	chr1Lx66864674	NonProperStrand	1	chr1	6865043	6865133	LINE	Lx6	L1	chr1Lx66864998	ProperStrand	1	1	-inf
chr2	75500757	75500794	protein_coding	Hnrnpa3	exon	ENSMUSG00000059005	ProperStrand	289	chr10	127521198	127521270	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	8	-inf
chr2	144087324	144087463	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	chr4	56910496	56910618	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	5	-3.9998
chr3	90217459	90219120	protein_coding	Ints3	exon	ENSMUSG00000027933	ProperStrand	87	chr11	77996560	77996619	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-5.3643
chr10	76522745	76526752	protein_coding	Col18a1	exon	ENSMUSG00000001435	ProperStrand	287	chr2	79843543	79843563	protein_coding	Pde1a	intron	ENSMUSG00000059173	NonProperStrand	275	1	-7.1393
chr8	86424480	86465131	protein_coding	Lphn1	intron	ENSMUSG00000013033	ProperStrand	221	chr4	131865856	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	5	-2.8323
chr11	69414482	69414498	protein_coding	Atp1b2	utr3	ENSMUSG00000041329	ProperStrand	28	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-5.3074
chrX	71481060	71481160	protein_coding	Flna	exon	ENSMUSG00000031328	ProperStrand	134	chr19	8798743	8798813	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-3.2939
chr9	78023109	78023148	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr7	63174889	63178135	protein_coding	Cyfip1	exon	ENSMUSG00000030447	ProperStrand	23	1	-7.7915
chr9	20702584	20702992	protein_coding	Eif3g	exon	ENSMUSG00000070319	ProperStrand	38	chr1	162966845	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-7.1668
chr1	182186358	182186375	protein_coding	Psen2	utr5	ENSMUSG00000010609	NonProperStrand	3	chr5	123622050	123622066	protein_coding	Hpd	exon	ENSMUSG00000029445	ProperStrand	254	1	-16.7599
chr15	98350146	98350181	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	chr12	110874223	110874291	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	1	-1.7973
chr8	88062652	88077300	protein_coding	Dnaja2	exon	ENSMUSG00000031701	ProperStrand	39	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-3.8618
chr11	73732873	73732963	LINE	Lx7	L1	chr11Lx773732767	ProperStrand	1	chr1	29903680	29903760	SINE	B3	B2	chr1B329903553	ProperStrand	1	1	-inf
chr16	43886793	43886929	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	chr14	52829458	52829520	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	4	-10.6705
chr18	78017576	78017614	protein_coding	Atp5a1	exon	ENSMUSG00000025428	ProperStrand	254	chr1	162967531	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-2.1938
chr1	60038343	60038378	protein_coding	Fam117b	exon	ENSMUSG00000041040	ProperStrand	31	chr11	97642952	97643061	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-9.1064
chr10	12389531	12389609	protein_coding	Utrn	exon	ENSMUSG00000019820	ProperStrand	69	chr4	131908236	131908291	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.2232
chr7	146684406	146684425	protein_coding	Inpp5a	intron	ENSMUSG00000025477	ProperStrand	166	chr5	124850852	124850997	protein_coding	Sbno1	exon	ENSMUSG00000038095	ProperStrand	134	1	-9.6593
chr8	96831790	96831854	protein_coding	Nup93	exon	ENSMUSG00000032939	ProperStrand	43	chr1	162967532	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	3	-9.9760
chr5	103587480	103587499	protein_coding	Mapk10	intron	ENSMUSG00000046709	ProperStrand	18	chr17	13112512	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	3	-15.8921
chr4	43505839	43505878	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr12	110923175	110923199	snoRNA	ENSMUSG00000084487_SNORD113	.	ENSMUSG00000084487	ProperStrand	183	1	-1.2699
chr5	97993163	97993180	lincRNA	4930467D21Rik	exon	ENSMUSG00000085273	NonProperStrand	1	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-inf
chr1	133907395	133907440	protein_coding	Elk4	intron	ENSMUSG00000026436	ProperStrand	14	chr4	122968661	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	3	-20.0332
chr17	35054525	35054542	protein_coding	Slc44a4	exon	ENSMUSG00000007034	ProperStrand	5	chr16	23110962	23110999	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr17	35089182	35089239	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-0.7857
chr8	107722893	107722980	protein_coding	Cbfb	intron	ENSMUSG00000031885	ProperStrand	21	chr7	116663692	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.4437
chr10	95015184	95026349	protein_coding	Nudt4	exon	ENSMUSG00000020029	ProperStrand	32	chr3	123210854	123210885	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.1535
chr2	6793402	6793468	protein_coding-noncoding	Celf2	utr3	ENSMUSG00000002107	ProperStrand	1	chr18	82662186	82662202	protein_coding	Mbp	intron	ENSMUSG00000041607	NonProperStrand	185	1	-inf
chr7	133592210	133592226	protein_coding	Atp2a1	exon	ENSMUSG00000030730	ProperStrand	49	chr5	108334195	108334256	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-5.2126
chr1	162967735	162967806	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	chr2	26494709	26494809	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	7	-8.5326
chr13	69754393	69756337	protein_coding	Nsun2	exon	ENSMUSG00000021595	ProperStrand	110	chr1	162965553	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.2201
chr4	147965644	147965660	protein_coding	Srm	utr5	ENSMUSG00000006442	ProperStrand	19	chr2	130101971	130102032	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	2	-12.3000
chr16	33726534	33726550	protein_coding	Heg1	exon	ENSMUSG00000075254	NonProperStrand	37	chr17	24857716	24857776	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.1418
chr2	172841118	172841149	protein_coding	Rae1	utr3	ENSMUSG00000027509	ProperStrand	38	chrX	34622906	34622991	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-4.0169
chr12	77389920	77390432	protein_coding	Mthfd1	exon	ENSMUSG00000021048	ProperStrand	71	chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	3	-20.8877
chr1	58228679	58228696	protein_coding	Aox3	exon	ENSMUSG00000064294	ProperStrand	39	chr9	15119632	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.4004
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr2	153050783	153050799	protein_coding	Tspyl3	exon	ENSMUSG00000074671	ProperStrand	228	1	-5.1669
chr17	25296587	25296603	protein_coding	Clcn7	exon	ENSMUSG00000036636	ProperStrand	94	chr15	79913307	79913344	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.7827
chr11	58682398	58682415	protein_coding	2810021J22Rik	utr5	ENSMUSG00000020491	ProperStrand	162	chr14	56473118	56473176	protein_coding	Nynrin	exon	ENSMUSG00000075592	ProperStrand	76	1	-10.8447
chr4	133429106	133429184	protein_coding	Rps6ka1	intron	ENSMUSG00000003644	ProperStrand	68	chr19	8799042	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	6	-19.7952
mmu-miR-1949	3	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr7	29208525	29208625	protein_coding	Samd4b	exon	ENSMUSG00000037513	ProperStrand	72	1	-7.7847
chr3	101388726	101388795	protein_coding	Atp1a1	exon	ENSMUSG00000033161	ProperStrand	316	chr9	120038000	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-1.7580
chr17	24857717	24857807	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	chr16	32243837	32243884	snoRNA	ENSMUSG00000080440_SNORA79	.	ENSMUSG00000080440	ProperStrand	140	1	-1.0333
chr8	61391767	61391783	protein_coding	BC030500	exon	ENSMUSG00000049946	NonProperStrand	12	chr7	116664807	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-9.2609
chr1	133807795	133807857	protein_coding	Nucks1	intron	ENSMUSG00000026434	ProperStrand	59	chr16	23111731	23111821	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-3.5119
chrX	7536931	7536947	protein_coding	Gata1	exon	ENSMUSG00000031162	NonProperStrand	6	chrX	45753780	45754969	protein_coding	Bcorl1	exon	ENSMUSG00000036959	ProperStrand	36	4	-19.2114
chr1	162870293	162895854	protein_coding	Rc3h1	exon	ENSMUSG00000040423	ProperStrand	13	chr11	97642952	97643082	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	4	-17.0314
chr6	70794802	70794820	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chr8	74446729	74446745	protein_coding	Zfp617	intron	ENSMUSG00000066880	NonProperStrand	208	3	-18.9644
chr2	38280202	38280225	lincRNA	Gm13589	intron	ENSMUSG00000085950	NonProperStrand	31	chr4	131908356	131908464	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	1	-8.5838
chr3	108499885	108499955	protein_coding	Gpsm2	exon	ENSMUSG00000027883	ProperStrand	20	chr1	162967505	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-9.1870
chr5	104632578	104632668	protein_coding	Dmp1	intron	ENSMUSG00000029307	ProperStrand	2	chr9	54787587	54787667	protein_coding	Agphd1	intron	ENSMUSG00000035878	NonProperStrand	19	1	-inf
chr6	88847389	88847424	protein_coding	Mcm2	exon	ENSMUSG00000002870	ProperStrand	83	chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	1	-8.8383
chr2	90235294	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	46836607	46836623	protein_coding	Cnnm2	exon	ENSMUSG00000064105	NonProperStrand	19	1	-6.7268
chr17	66468411	66468427	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	chr2	181083934	181084168	protein_coding	Rtel1	exon	ENSMUSG00000038685	ProperStrand	22	4	-inf
chr7	28535793	28535849	protein_coding	Zfp60	utr3	ENSMUSG00000037640	ProperStrand	14	chr4	131908689	131908749	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.6665
chr1	12711940	12711957	protein_coding	Sulf1	intron	ENSMUSG00000016918	ProperStrand	22	chr9	120039546	120039603	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-5.2308
chr11	102296417	102296606	protein_coding	Grn	exon	ENSMUSG00000034708	ProperStrand	43	chr16	23110914	23110966	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-4.8383
chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr3	76069096	76069114	protein_coding	Fstl5	intron	ENSMUSG00000034098	ProperStrand	23	1	-8.3759
chr15	81110991	81111009	SINE	ID4	ID	chr15ID481110956	ProperStrand	272	chr9	59516905	59518323	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	1	-4.2355
chr5	87265384	87265460	protein_coding	Ythdc1	utr3	ENSMUSG00000035851	ProperStrand	45	chr15	79913288	79913310	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.1312
chr12	41618064	41618154	LINE	L1_Mm	L1	chr12L1_Mm41617957	ProperStrand	1	chr12	41618271	41618351	LINE	Lx	L1	chr12Lx41618232	NonProperStrand	1	1	-inf
chr4	103728236	103728257	protein_coding	Dab1	intron	ENSMUSG00000028519	ProperStrand	19	chr2	144087324	144087450	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	2	-14.1165
chr11	6523906	6523922	protein_coding	Tbrg4	exon	ENSMUSG00000000384	NonProperStrand	56	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-11.8247
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr8	112387973	112387989	antisense	Gm17344	.	ENSMUSG00000078143	NonProperStrand	100	1	-7.6955
chr5	67790799	67790889	protein_coding	Bend4	intron	ENSMUSG00000092060	ProperStrand	56	chr5	130300468	130300548	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	12	-21.4447
chr4	140551528	140552218	protein_coding	Atp13a2	exon	ENSMUSG00000036622	ProperStrand	39	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-8.6033
chr4	94028721	94028737	lincRNA	Gm12648	intron	ENSMUSG00000085931	ProperStrand	5	chr3	32625484	32625511	protein_coding	Actl6a	exon	ENSMUSG00000027671	ProperStrand	31	1	-18.4153
chr2	25312429	25313191	protein_coding	Clic3	exon	ENSMUSG00000015093	ProperStrand	79	chr5	143664866	143664922	protein_coding	Actb	utr3	ENSMUSG00000029580	ProperStrand	446	1	-8.7452
chrX	130988196	130988212	protein_coding	Drp2	utr3	ENSMUSG00000000223	NonProperStrand	12	chr2	26494711	26494842	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-6.2196
chr7	139430077	139430094	protein_coding	Chst15	exon	ENSMUSG00000030930	ProperStrand	20	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-11.5952
chr2	92440278	92440296	protein_coding	Chst1	utr5	ENSMUSG00000027221	ProperStrand	17	chr7	29136526	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-7.8453
chr9	15130740	15130793	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	chr10	80641715	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	1	-3.5851
chr8	77742558	77742574	protein_coding	Rasd2	exon	ENSMUSG00000034472	NonProperStrand	237	chr1	162965981	162966035	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-2.5071
chr2	146048167	146048183	protein_coding	Insm1	exon	ENSMUSG00000068154	ProperStrand	8	chr2	166890504	166890549	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-11.6844
chr2	135828391	135833087	protein_coding	Plcb4	exon	ENSMUSG00000039943	ProperStrand	50	chr1	16093259	16093281	protein_coding	Rpl7	exon	ENSMUSG00000043716	ProperStrand	93	1	-12.8010
chr5	129528280	129528317	protein_coding	Ran	exon	ENSMUSG00000029430	ProperStrand	82	chr5	111121066	111121126	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	3	-13.4402
chr1	141319671	141319687	protein_coding	Zbtb41	utr5	ENSMUSG00000033964	NonProperStrand	145	chr11	97643180	97643665	protein_coding	Rpl23	exon	ENSMUSG00000071415	ProperStrand	920	1	-6.1086
chrX	7519212	7519233	protein_coding	Hdac6	exon	ENSMUSG00000031161	ProperStrand	42	chr19	8799830	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-5.6427
chr15	34370544	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	chr17	24856620	24856745	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	23	-11.9383
chr19	5799773	5799833	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr3	88163055	88163086	protein_coding	Smg5	exon	ENSMUSG00000001415	ProperStrand	70	2	-11.6220
chr3	94837625	94837683	protein_coding	Psmd4	exon	ENSMUSG00000005625	ProperStrand	20	chr4	116827152	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-9.2530
chr2	179992990	179993080	protein_coding-noncoding	Rps21	utr5	ENSMUSG00000039001	ProperStrand	1	chr5	130300460	130300540	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-inf
chr4	151430233	151430266	protein_coding	Nol9	exon	ENSMUSG00000028948	ProperStrand	93	chr16	23111695	23111785	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.2531
chr11	87240290	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	chr1	63225254	63225284	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	1	-6.5337
chr8	129468802	129468866	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	chr4	132394418	132394461	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	1	-0.9552
chr11	6295131	6295167	protein_coding	Zmiz2	utr5	ENSMUSG00000041164	ProperStrand	69	chr9	15119363	15119425	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	2	-7.9989
chr7	148195607	148195623	protein_coding	Ifitm3	utr3	ENSMUSG00000025492	NonProperStrand	20	chr9	120038470	120038529	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.1184
chr6	124761231	124761271	protein_coding	Tpi1	utr3	ENSMUSG00000023456	ProperStrand	94	chr2	26768408	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-4.7310
chr14	58303956	58303972	protein_coding	Lats2	intron	ENSMUSG00000021959	NonProperStrand	14	chr4	106060360	106060410	protein_coding	Usp24	exon	ENSMUSG00000028514	ProperStrand	74	1	-15.8828
chr18	12172461	12172477	protein_coding	6030446N20Rik	intron	ENSMUSG00000049411	ProperStrand	235	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	2	-7.5708
chr4	107744013	107746974	protein_coding	Scp2	exon	ENSMUSG00000028603	ProperStrand	23	chr4	131865855	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.4190
chr14	51427159	51427239	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr7	28964029	28964206	protein_coding	Fbl	utr3	ENSMUSG00000046865	ProperStrand	52	1	-7.4946
chr15	10924744	10924760	protein_coding	Amacr	exon	ENSMUSG00000022244	ProperStrand	9	chr7	25670560	25673346	protein_coding	Rps19	exon	ENSMUSG00000040952	ProperStrand	101	1	-16.1234
chr15	59147189	59147205	protein_coding	Sqle	utr5	ENSMUSG00000022351	ProperStrand	19	chr5	121655016	121655129	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-9.7842
chr2	118730506	118730524	protein_coding	Bahd1	intron	ENSMUSG00000040007	NonProperStrand	4	chr9	15119763	15120039	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-12.9172
chr9	81949792	81949813	protein_coding	Mei4	intron	ENSMUSG00000043289	NonProperStrand	42	chr13	23643158	23643213	protein_coding	Hist1h4f	utr3	ENSMUSG00000069274	ProperStrand	28	2	-19.4167
chr19	40639465	40641080	protein_coding	Aldh18a1	exon	ENSMUSG00000025007	NonProperStrand	6	chr16	23110548	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	NonProperStrand	16	1	-19.2370
chr1	162967513	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	chr4	130305549	130305621	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	1	-0.8169
chr9	95525014	95525035	antisense	Gm16126	.	ENSMUSG00000086585	NonProperStrand	229	chr13	34219482	34219582	protein_coding	Tubb2b	exon	ENSMUSG00000045136	ProperStrand	49	1	-11.0358
chr11	99075267	99081972	protein_coding	Smarce1	exon	ENSMUSG00000037935	ProperStrand	38	chr10	23505153	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-9.8039
chr9	15118245	15118381	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	chr15	98350146	98350285	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	20	-0.7157
chr7	52713966	52714546	protein_coding	Ftl1	exon	ENSMUSG00000050708	ProperStrand	807	chr6	115757992	115758082	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	19	-20.0747
chr10	126773496	126773585	protein_coding	Gli1	exon	ENSMUSG00000025407	ProperStrand	48	chr12	55835636	55835682	snRNA	ENSMUSG00000075960_U1	.	ENSMUSG00000075960	ProperStrand	210	1	-11.2503
chr1	27746962	27747042	SINE	B1_Mm	Alu	chr1B1_Mm27746922	NonProperStrand	1	chr8	109435615	109435705	protein_coding	Cirh1a	intron	ENSMUSG00000041438	NonProperStrand	3	1	-inf
chr3	83726901	83726991	protein_coding	D930015E06Rik	exon	ENSMUSG00000033767	ProperStrand	17	chr4	122968614	122968694	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-8.8169
chr19	43579408	43579425	protein_coding	Got1	intron	ENSMUSG00000025190	NonProperStrand	147	chr5	144015063	144015081	protein_coding	Zfp316	exon	ENSMUSG00000046658	NonProperStrand	4	1	-17.1946
chr2	90235290	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr13	8756716	8766307	protein_coding	Adarb2	utr3	ENSMUSG00000052551	ProperStrand	292	2	-3.1003
chr6	125059313	125059417	protein_coding	Chd4	exon	ENSMUSG00000063870	ProperStrand	303	chr1	162968249	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-3.6921
chr2	124925588	124925618	protein_coding-noncoding	Myef2	utr3	ENSMUSG00000027201	ProperStrand	6	chr10	23505152	23505246	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-9.1162
chr2	90235295	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	128384184	128384204	protein_coding	Fkbp4	intron	ENSMUSG00000030357	NonProperStrand	42	2	-8.4875
chr2	42398548	42398564	protein_coding	Lrp1b	intron	ENSMUSG00000049252	NonProperStrand	39	chr19	8963027	8963172	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-7.7565
chr6	72297627	72297643	protein_coding	0610030E20Rik	exon	ENSMUSG00000058706	ProperStrand	14	chr1	162965530	162965555	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-6.0900
chr1	88426329	88426561	protein_coding	Ptma	exon	ENSMUSG00000026238	ProperStrand	385	chr9	64024931	64024998	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	5	-20.7814
chr13	100113345	100114603	protein_coding	Ptcd2	exon	ENSMUSG00000021650	ProperStrand	5	chr7	52382755	52382831	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-11.8971
chr14	24251850	24251866	protein_coding	Kcnma1	intron	ENSMUSG00000063142	NonProperStrand	104	chr11	62416951	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-4.9704
chr9	120869467	120869543	protein_coding	Ctnnb1	utr3	ENSMUSG00000006932	ProperStrand	214	chr5	117733417	117733437	protein_coding	Pebp1	exon	ENSMUSG00000032959	ProperStrand	54	2	-17.3597
chr14	55261518	55261567	protein_coding	Acin1	utr3	ENSMUSG00000022185	ProperStrand	67	chr10	23506278	23506327	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	4	-18.9583
chr8	3516938	3517004	protein_coding	Pnpla6	intron	ENSMUSG00000004565	ProperStrand	60	chr11	97642991	97643080	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.4717
chr3	36464307	36464336	protein_coding	Ccna2	utr3	ENSMUSG00000027715	ProperStrand	74	chr3	36589064	36589081	protein_coding	Trpc3	utr5	ENSMUSG00000027716	NonProperStrand	3	1	-inf
chr2	150152440	150152487	protein_coding	3300002I08Rik	intron	ENSMUSG00000063364	NonProperStrand	8	chr3	68889051	68889147	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-7.2271
chr17	4082625	4082705	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr10	107800764	107800854	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	1	-4.7877
chr11	69579394	69579415	Low_complexity	G-rich	Low_complexity	chr11G-rich69579338	NonProperStrand	1	chr5	121655044	121655097	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-inf
chr1	87985394	87985413	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	chr17	35089184	35089233	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-1.2662
chr7	19619879	19621251	protein_coding	Sympk	exon	ENSMUSG00000023118	ProperStrand	43	chr9	120038571	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-6.1968
chr2	90235286	90235348	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	59539683	59539700	protein_coding	Fzd7	utr5	ENSMUSG00000041075	ProperStrand	373	3	-3.9647
chr11	50109458	50109501	protein_coding	Canx	utr3	ENSMUSG00000020368	ProperStrand	296	chr5	31522837	31522927	protein_coding	Ppm1g	utr5	ENSMUSG00000029147	ProperStrand	69	1	-9.8338
chr15	79940902	79940946	protein_coding	Syngr1	exon	ENSMUSG00000022415	ProperStrand	51	chr11	62416625	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-5.4833
chr16	4886395	4886411	protein_coding	Mgrn1	exon	ENSMUSG00000022517	NonProperStrand	157	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-6.6798
chr4	122539649	122539728	protein_coding	Cap1	exon	ENSMUSG00000028656	ProperStrand	45	chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-6.4104
chr9	120038468	120038558	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	chr11	69482352	69482403	snoRNA	ENSMUSG00000089542_snoU6-77	.	ENSMUSG00000089542	ProperStrand	138	5	-8.6685
chr5	135725240	135725331	protein_coding	Fzd9	exon	ENSMUSG00000049551	ProperStrand	1	chr5	74489595	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-inf
chr5	115939498	115939584	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr16	23109041	23109093	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-2.1651
chr18	61464402	61464419	protein_coding	Ppargc1b	exon	ENSMUSG00000033871	NonProperStrand	5	chr3	108357255	108357393	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	2	-15.5700
chr1	94755111	94755134	protein_coding	Gpc1	exon	ENSMUSG00000034220	ProperStrand	30	chr16	23111439	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.3326
chr6	118038140	118038240	protein_coding	Rasgef1a	exon	ENSMUSG00000030134	ProperStrand	6	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-6.8330
chr9	63066908	63066926	protein_coding	Map2k5	intron	ENSMUSG00000058444	NonProperStrand	79	chr15	79913297	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-3.0909
chr4	147452628	147452718	protein_coding	Agtrap	utr3	ENSMUSG00000029007	ProperStrand	18	chr11	97642980	97643060	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.6997
chr12	12323572	12323588	protein_coding	Fam49a	intron	ENSMUSG00000020589	NonProperStrand	4	chr19	7431826	7431879	protein_coding	AI846148	utr3	ENSMUSG00000024970	ProperStrand	17	1	-24.9237
chr3	14565743	14565762	protein_coding	Lrrcc1	exon	ENSMUSG00000027550	ProperStrand	39	chr11	106362304	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-6.6949
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr4	149012483	149017317	protein_coding	Clstn1	exon	ENSMUSG00000039953	ProperStrand	173	5	-17.4882
mmu-miR-291a-5p	2	22	miRNA	mmu-miR-291a-5p	.	mmu-miR-291a-5p	ProperStrand	8	chr2	26494724	26494842	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	3	-16.4315
chr9	99483993	99484009	protein_coding	Dbr1	exon	ENSMUSG00000032469	ProperStrand	162	chrX	84483699	84483715	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-6.2781
chr2	102950838	102950928	LTR	RMER4B	ERVK	chr2RMER4B102950439	ProperStrand	1	chr5	75854104	75854194	LTR	MTEb	MaLR	chr5MTEb75854111	NonProperStrand	1	1	-inf
chr1	16093702	16093755	protein_coding	Rpl7	exon	ENSMUSG00000043716	ProperStrand	93	chr6	54435495	54435511	protein_coding	Wipf3	exon	ENSMUSG00000086040	NonProperStrand	4	1	-17.9274
chr14	70299865	70299882	protein_coding	Pebp4	intron	ENSMUSG00000022085	ProperStrand	5	chr19	9043878	9043932	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	1	-14.6332
chr5	44302998	44303038	protein_coding	Cd38	utr3	ENSMUSG00000029084	ProperStrand	2	chr4	131865382	131865472	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-11.3495
chr1	33828651	33828669	protein_coding	Zfp451	intron	ENSMUSG00000042197	NonProperStrand	393	chr17	13115656	13115701	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	1	-3.8823
chr17	13115707	13115786	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	3	-1.9871
chr11	101385189	101385269	protein_coding	Brca1	exon	ENSMUSG00000017146	ProperStrand	51	chr3	68889027	68889117	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-3.5547
chr1	88248613	88248653	snoRNA	ENSMUSG00000064696_SNORD20	.	ENSMUSG00000064696	ProperStrand	89	chr12	92811917	92812002	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	2	-12.4388
chr11	5092933	5093063	protein_coding	Kremen1	utr3	ENSMUSG00000020393	ProperStrand	33	chr11	121336866	121336894	protein_coding	Tbcd	exon	ENSMUSG00000039230	ProperStrand	34	1	-15.6484
chr17	27696514	27696536	protein_coding	Hmga1	exon	ENSMUSG00000046711	ProperStrand	180	chr15	73416617	73416633	protein_coding	Slc45a4	exon	ENSMUSG00000079020	ProperStrand	127	1	-9.6049
chr11	113691314	113691394	protein_coding	Sdk2	exon	ENSMUSG00000041592	ProperStrand	17	chr4	131865893	131865983	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.9909
chr15	96250964	96251054	protein_coding	Scaf11	exon	ENSMUSG00000033228	ProperStrand	37	chr18	35716766	35716846	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.0044
chr14	21815073	21815116	protein_coding	Vcl	exon	ENSMUSG00000021823	ProperStrand	48	chr7	52777709	52777725	protein_coding	Tulp2	exon	ENSMUSG00000023467	ProperStrand	24	1	-15.6087
chr7	30972443	30972481	protein_coding	Capns1	utr3	ENSMUSG00000001794	ProperStrand	35	chr19	21932488	21932533	protein_coding	Tmem2	utr3	ENSMUSG00000024754	ProperStrand	133	2	-19.3132
chr19	5105044	5105095	protein_coding	Rab1b	intron	ENSMUSG00000024870	ProperStrand	133	chrX	99445995	99446012	protein_coding	Cited1	utr5	ENSMUSG00000051159	ProperStrand	72	1	-11.3486
chr19	44649328	44649375	protein_coding	Hif1an	utr3	ENSMUSG00000036450	ProperStrand	16	chr11	6519809	6519881	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-10.6208
chr11	58768194	58768250	protein_coding	Hist3h2a	utr5	ENSMUSG00000078851	ProperStrand	67	chr7	150717322	150717412	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-5.2915
chr5	145532364	145532393	protein_coding	Trrap	intron	ENSMUSG00000045482	ProperStrand	399	chr12	110887828	110887894	snoRNA	ENSMUSG00000084549_SNORD113	.	ENSMUSG00000084549	ProperStrand	196	1	-7.1578
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr6	115757992	115758092	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	6	-10.3426
chr11	58682398	58682415	protein_coding	2810021J22Rik	utr5	ENSMUSG00000020491	ProperStrand	162	chr12	88778747	88778768	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-4.5639
chr5	74489200	74489254	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr19	59534008	59534026	protein_coding	Emx2	exon	ENSMUSG00000043969	NonProperStrand	87	1	-4.8997
chr7	135909644	135909744	protein_coding	Sec23ip	exon	ENSMUSG00000055319	ProperStrand	27	chr10	80641699	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	2	-14.5391
chr2	76689736	76689752	protein_coding	Ttn	exon	ENSMUSG00000051747	ProperStrand	66	chr2	93028835	93028851	protein_coding	Trp53i11	intron	ENSMUSG00000068735	ProperStrand	46	1	-13.6581
chr12	13885565	13885584	LINE	L1MC1	L1	chr12L1MC113885043	ProperStrand	1	chr8	11441964	11441980	protein_coding	Col4a2	exon	ENSMUSG00000031503	ProperStrand	74	1	-inf
chr2	28368857	28368876	protein_coding	Ralgds	utr5	ENSMUSG00000026821	NonProperStrand	60	chr16	23110538	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.4617
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr2	130490242	130490266	protein_coding	Ddrgk1	exon	ENSMUSG00000068290	ProperStrand	43	1	-8.9847
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr13	107737212	107737228	protein_coding	Dimt1	utr5	ENSMUSG00000021692	ProperStrand	185	1	-5.5721
chr8	73419657	73419757	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	chr17	71980654	71980679	snoRNA	ENSMUSG00000093289_Snord92	.	ENSMUSG00000093289	ProperStrand	56	5	-14.1351
chr2	120360101	120360155	protein_coding	Zfp106	exon	ENSMUSG00000027288	ProperStrand	199	chr19	8799054	8799091	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-3.5434
chr10	127496312	127505797	protein_coding	Ptges3	exon	ENSMUSG00000071072	ProperStrand	89	chr11	69483136	69483190	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.8056
chr4	126241214	126242178	protein_coding	Clspn	exon	ENSMUSG00000042489	ProperStrand	89	chr4	116826701	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	2	-9.7564
chr6	48410411	48410428	protein_coding	Sspo	exon	ENSMUSG00000029797	NonProperStrand	94	chr17	24665420	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-4.0835
chr17	32518035	32524524	protein_coding	Wiz	exon	ENSMUSG00000024050	ProperStrand	26	chr7	29136554	29136644	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.8707
chr16	96344015	96346377	protein_coding	Hmgn1	exon	ENSMUSG00000040681	ProperStrand	38	chr9	15118250	15118340	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	6	-inf
chr10	5991736	6063976	protein_coding	Akap12	intron	ENSMUSG00000038587	ProperStrand	1008	chr3	123210853	123210985	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	10	-0.7733
chr4	44025826	44031705	protein_coding	Clta	exon	ENSMUSG00000028478	ProperStrand	59	chr2	26494710	26494759	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.1372
chr11	57613884	57613903	lincRNA	2010001A14Rik	intron	ENSMUSG00000087165	NonProperStrand	5	chr19	8963081	8963168	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-7.1260
chrX	83547356	83547372	protein_coding	Mageb4	intron	ENSMUSG00000035427	NonProperStrand	191	chr10	126532147	126532163	protein_coding	Os9	utr3	ENSMUSG00000040462	NonProperStrand	28	1	-12.5314
chr16	57391760	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr15	79908957	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	2	-1.6434
chr6	45965480	46120177	protein_coding	Cntnap2	exon	ENSMUSG00000039419	NonProperStrand	283	chr1	162965531	162965554	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-0.8612
chr11	101466308	101466350	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	chr6	71832551	71832651	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-1.6240
chr8	19991399	19991508	pseudogene	2610005L07Rik	.	ENSMUSG00000071793	ProperStrand	40	chr18	35716850	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-10.0924
chr15	66996368	66996389	SINE	PB1D9	Alu	chr15PB1D966996339	ProperStrand	1	chr2	26767652	26767886	protein_coding	Rpl7a	exon	ENSMUSG00000062647	ProperStrand	234	1	-inf
chr14	15572355	15572371	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr15	73416617	73416633	protein_coding	Slc45a4	exon	ENSMUSG00000079020	ProperStrand	127	1	-9.7788
chr8	108401419	108401436	protein_coding	Nutf2	intron	ENSMUSG00000008450	ProperStrand	39	chr17	51059907	51059923	protein_coding	Tbc1d5	exon	ENSMUSG00000023923	NonProperStrand	51	1	-14.5096
chr4	124645990	124646011	antisense	Gm12930	.	ENSMUSG00000087011	ProperStrand	5	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-12.8963
chr10	98726553	98726570	protein_coding	Dusp6	exon	ENSMUSG00000019960	ProperStrand	116	chr17	24665420	24665458	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-3.6910
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr5	108336376	108336457	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	3	-3.4665
chr8	35016728	35016783	protein_coding	Rbpms	intron	ENSMUSG00000031586	ProperStrand	58	chr5	20392409	20392434	protein_coding	Tmem60	exon	ENSMUSG00000045435	ProperStrand	3	1	-inf
chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	chr11	97413144	97413161	protein_coding	Srcin1	exon	ENSMUSG00000038453	NonProperStrand	21	1	-14.6875
chr7	106630275	106630820	protein_coding	Rps3	exon	ENSMUSG00000030744	ProperStrand	159	chr5	130295416	130295506	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	2	-5.7994
chr5	31179377	31179437	protein_coding	Tmem214	utr3	ENSMUSG00000038828	ProperStrand	9	chr3	132554382	132554398	protein_coding	Npnt	exon	ENSMUSG00000040998	ProperStrand	14	1	-inf
chr4	43598176	43598193	protein_coding	Rgp1	utr3	ENSMUSG00000028468	NonProperStrand	1	chr4	131865380	131865493	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-inf
chr7	134461584	134461690	protein_coding	Itgal	intron	ENSMUSG00000030830	ProperStrand	38	chr10	23505163	23505279	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	7	-14.9745
chr5	31117166	31117183	protein_coding	Mapre3	utr5	ENSMUSG00000029166	NonProperStrand	19	chrX	11635848	11635865	protein_coding	Bcor	exon	ENSMUSG00000040363	NonProperStrand	293	2	-19.1422
chr10	126532147	126532163	protein_coding	Os9	utr3	ENSMUSG00000040462	NonProperStrand	28	chr5	130300458	130300548	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-6.5864
chr12	92892763	92892857	protein_coding	Ston2	intron	ENSMUSG00000020961	NonProperStrand	11	chr13	49015400	49015465	protein_coding	Fam120a	intron	ENSMUSG00000038014	ProperStrand	76	7	-inf
chr19	56999614	56999638	protein_coding	Afap1l2	exon	ENSMUSG00000025083	ProperStrand	8	chr10	23505152	23505219	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-8.1135
chr4	116283703	116283803	protein_coding	Nasp	exon	ENSMUSG00000028693	ProperStrand	64	chr10	80641733	80641765	protein_coding	Eef2	intron	ENSMUSG00000034994	ProperStrand	2244	1	-5.9719
chr5	122891328	122891404	protein_coding	Anapc7	exon	ENSMUSG00000029466	ProperStrand	11	chr14	52629067	52629157	protein_coding	Zfp219	exon	ENSMUSG00000049295	ProperStrand	27	1	-18.1357
chrX	45788962	45788979	protein_coding	Elf4	intron	ENSMUSG00000031103	NonProperStrand	49	chr12	17552961	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-5.4840
chr14	32071132	32071162	protein_coding	Bap1	exon	ENSMUSG00000021901	ProperStrand	12	chr1	162966004	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-6.7576
chr6	143143815	143146020	protein_coding	Etnk1	exon	ENSMUSG00000030275	ProperStrand	61	chr7	116663634	116663657	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.4834
chr19	56671136	56671205	protein_coding	Nhlrc2	intron	ENSMUSG00000025078	ProperStrand	38	chr19	8800355	8800444	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-4.3894
chr7	86288264	86290192	protein_coding	Mfge8	exon	ENSMUSG00000030605	ProperStrand	73	chr2	158185574	158185652	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-6.0988
chr5	119192584	119192631	protein_coding	Med13l	exon	ENSMUSG00000018076	ProperStrand	226	chr11	97546405	97546421	protein_coding	Mllt6	utr3	ENSMUSG00000038437	ProperStrand	110	1	-9.4379
chr4	125760672	125760762	protein_coding-noncoding	Oscp1	utr5	ENSMUSG00000042616	ProperStrand	1	chr4	125760904	125760994	protein_coding	Oscp1	intron	ENSMUSG00000042616	ProperStrand	6	1	-inf
chr9	108393146	108394811	protein_coding	Usp19	utr5	ENSMUSG00000006676	ProperStrand	57	chr9	15119646	15119726	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-4.7546
chr3	137528502	137528593	protein_coding	H2afz	exon	ENSMUSG00000037894	ProperStrand	72	chr11	96112970	96112987	protein_coding	Gm53	exon	ENSMUSG00000078706	NonProperStrand	16	2	-inf
chr4	131399490	131399506	protein_coding	Mecr	exon	ENSMUSG00000028910	NonProperStrand	109	chr14	96988161	96988179	snoRNA	ENSMUSG00000064581_SNORA30	.	ENSMUSG00000064581	ProperStrand	146	1	-10.3294
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr11	6520321	6520375	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	1	-4.8684
chr6	97112810	97112941	snoRNA	ENSMUSG00000065728_SNORA36	.	ENSMUSG00000065728	ProperStrand	158	chr10	110918548	110918689	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	3	-5.0310
chr11	120208974	120209039	protein_coding	Actg1	exon	ENSMUSG00000062825	ProperStrand	178	chr1	162965560	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.4707
chr7	73318104	73318160	protein_coding	Chsy1	utr3	ENSMUSG00000032640	ProperStrand	25	chr3	108357255	108357277	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-6.2553
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	25484358	25484374	protein_coding	Kank1	exon	ENSMUSG00000032702	ProperStrand	218	1	-2.1446
chr1	87731943	87732006	protein_coding	Cab39	exon	ENSMUSG00000036707	ProperStrand	45	chr9	15118519	15118539	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	2	-15.6527
chr4	155105546	155106108	protein_coding	Ssu72	exon	ENSMUSG00000029038	ProperStrand	7	chr6	115758047	115758085	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-9.8502
chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr5	142285868	142285884	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	1	-3.8619
chr2	30291143	30293114	protein_coding	Ppp2r4	exon	ENSMUSG00000039515	ProperStrand	76	chrX	34622906	34622956	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-2.7507
chr3	133132597	133134390	protein_coding	Tet2	exon	ENSMUSG00000040943	ProperStrand	192	chr16	23111690	23111720	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	7	-6.3498
chr2	101739026	101739048	protein_coding	Commd9	exon	ENSMUSG00000027163	ProperStrand	4	chr4	131908810	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-6.2660
chr8	4267337	4267649	protein_coding	Timm44	exon	ENSMUSG00000002949	ProperStrand	63	chr2	130102053	130102107	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-5.2615
chr6	33880562	33880630	protein_coding	Exoc4	intron	ENSMUSG00000029763	ProperStrand	120	chr9	58736886	58736986	protein_coding	Neo1	exon	ENSMUSG00000032340	ProperStrand	35	1	-13.0106
chr16	16323855	16324068	protein_coding	Dnm1l	exon	ENSMUSG00000022789	NonProperStrand	38	chr5	3981131	3981148	protein_coding	Akap9	exon	ENSMUSG00000040407	ProperStrand	28	1	-15.7827
chr17	65102373	65102425	protein_coding	Man2a1	utr3	ENSMUSG00000024085	ProperStrand	20	chr2	130101266	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-8.7990
chr8	97870579	97870596	protein_coding	AA960436	utr3	ENSMUSG00000031792	ProperStrand	5	chr19	8800377	8800467	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-13.9604
chr10	80643042	80643091	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr11	98878372	98878468	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	2	-0.8735
chr5	3693225	3693241	protein_coding	Ankib1	exon	ENSMUSG00000040351	NonProperStrand	98	chr13	36194784	36194801	protein_coding	Lyrm4	intron	ENSMUSG00000046573	ProperStrand	8	1	-16.4083
chr2	80297373	80297389	LINE	L1MB8	L1	chr2L1MB880297262	ProperStrand	53	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-11.0130
chr15	78796778	78798241	protein_coding	Triobp	exon	ENSMUSG00000033088	ProperStrand	29	chr16	23110829	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.1645
chr2	179322380	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr17	34727760	34727777	protein_coding	Gpsm3	exon	ENSMUSG00000034786	ProperStrand	12	1	-14.4967
chr2	121949511	121949527	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	chr4	116230385	116230401	protein_coding	Gpbp1l1	utr5	ENSMUSG00000034042	NonProperStrand	106	1	-9.1570
chr12	110881058	110881096	lincRNA	Rian	intron	ENSMUSG00000091793	ProperStrand	612	chr4	116827143	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-2.6373
chr12	80290066	80290091	protein_coding	Rdh11	exon	ENSMUSG00000066441	ProperStrand	10	chr16	23111754	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-8.7017
chr19	12853475	12853565	protein_coding	Zfp91	exon	ENSMUSG00000024695	ProperStrand	16	chr16	23110460	23110540	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.9207
chr2	90235294	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	72272839	72272929	snRNA	ENSMUSG00000075752_U2	.	ENSMUSG00000075752	ProperStrand	535	2	-1.7397
chr13	42396835	42396851	protein_coding	Edn1	utr5	ENSMUSG00000021367	NonProperStrand	8	chr9	15119968	15120040	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-11.3774
chr8	110106287	110108086	protein_coding	Psmd7	exon	ENSMUSG00000039067	ProperStrand	36	chr16	23110966	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.6986
chr16	64855849	64855980	protein_coding	Cggbp1	utr3	ENSMUSG00000054604	ProperStrand	7	chr16	23110918	23110942	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.4785
chr19	60848613	60848642	protein_coding	Eif3a	exon	ENSMUSG00000024991	ProperStrand	287	chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	1	-5.4984
chr14	22487598	22487647	protein_coding	Myst4	exon	ENSMUSG00000021767	ProperStrand	151	chr3	34550229	34550284	protein_coding	Sox2	exon	ENSMUSG00000074637	ProperStrand	299	2	-13.1326
chr14	33153227	33153832	protein_coding	Ogdhl	exon	ENSMUSG00000021913	ProperStrand	182	chr11	6428087	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.3723
chr11	68189647	68189715	protein_coding	Ntn1	intron	ENSMUSG00000020902	ProperStrand	44	chr7	116663649	116663739	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.0569
chr17	45705890	45705919	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr11	77995189	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	3	-2.2275
chr3	110087027	110087107	LINE	Lx2B	L1	chr3Lx2B110087002	NonProperStrand	1	chr3	110086865	110086955	SINE	B1_Mm	Alu	chr3B1_Mm110086869	NonProperStrand	1	1	-inf
chr12	81981576	81981616	protein_coding	4933426M11Rik	utr3	ENSMUSG00000021133	ProperStrand	23	chrX	34622930	34622958	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-4.9855
mmu-miR-1949	0	18	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr19	8800084	8800110	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	6	-14.9132
chr9	44216900	44216916	protein_coding	Rps25	exon	ENSMUSG00000009927	ProperStrand	42	chr16	55991037	55991137	protein_coding	Rpl24	exon	ENSMUSG00000022601	ProperStrand	149	1	-12.2079
chr8	88036021	88049602	protein_coding	Gpt2	exon	ENSMUSG00000031700	ProperStrand	32	chr16	23111374	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-8.3955
chr11	75315375	75315432	protein_coding	Prpf8	utr3	ENSMUSG00000020850	ProperStrand	255	chr12	17552960	17553030	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	4	-8.7571
chr1	75484537	75484553	protein_coding	Obsl1	exon	ENSMUSG00000026211	NonProperStrand	192	chr19	8799022	8799063	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-3.6092
chr4	131865377	131865467	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	chr12	31943856	31943936	snoRNA	ENSMUSG00000065200_SNORA65	.	ENSMUSG00000065200	ProperStrand	19	1	-6.2464
chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	chr3	34550068	34550114	protein_coding	Sox2	exon	ENSMUSG00000074637	ProperStrand	299	1	-4.9974
chr5	115939529	115939610	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr6	71832550	71832628	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	5	-5.9155
chrX	99513387	99513404	lincRNA	Gm14858	intron	ENSMUSG00000085568	ProperStrand	4	chr2	179322378	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	1	-16.8648
chr11	115470449	115470613	protein_coding	Mif4gd	exon	ENSMUSG00000020743	ProperStrand	6	chr16	23111779	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-6.2752
chr4	94236345	94236440	protein_coding	Plaa	exon	ENSMUSG00000028577	ProperStrand	40	chr1	155287316	155287355	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	1	-9.7951
chr4	124729070	124729160	protein_coding	Gnl2	intron	ENSMUSG00000028869	ProperStrand	23	chr14	26563854	26563933	protein_coding	Zcchc24	intron	ENSMUSG00000055538	ProperStrand	42	1	-15.9462
chr9	70434999	70436850	protein_coding	Sltm	exon	ENSMUSG00000032212	ProperStrand	13	chr16	23110964	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-4.2316
chr14	96988089	96988179	snoRNA	ENSMUSG00000064581_SNORA30	.	ENSMUSG00000064581	ProperStrand	146	chr5	147646751	147646831	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	1	-6.1956
chr7	133938952	133939140	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	chr4	106632624	106632714	protein_coding	Ssbp3	intron	ENSMUSG00000061887	ProperStrand	36	1	-9.3677
chr5	123131116	123131206	protein_coding	P2rx7	exon	ENSMUSG00000029468	ProperStrand	8	chr9	120038564	120038644	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-11.4402
chr16	94913939	94913968	protein_coding	Dyrk1a	utr3	ENSMUSG00000022897	ProperStrand	17	chr9	40612830	40612920	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	1	-12.1036
chr6	4624524	4624549	protein_coding	Sgce	utr3	ENSMUSG00000004631	ProperStrand	2	chr10	23505150	23505203	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-8.0476
chr13	23713899	23713999	protein_coding	Hist1h1e	exon	ENSMUSG00000051627	ProperStrand	41	chr17	35089184	35089258	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-6.2347
chr5	108336932	108336968	protein_coding	Rpl5	exon	ENSMUSG00000058558	ProperStrand	235	chr14	76247765	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-3.2572
chr2	119790868	119790958	protein_coding	Mga	utr3	ENSMUSG00000033943	ProperStrand	180	chr7	116664809	116664889	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-0.9078
chr2	90235290	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	25105521	25107254	protein_coding	Ndor1	exon	ENSMUSG00000006471	NonProperStrand	84	1	-3.8272
chr5	135858996	135859086	protein_coding	Pom121	exon	ENSMUSG00000053293	ProperStrand	127	chr4	131865859	131865939	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.7590
chr13	14729834	14729934	protein_coding	AW209491	exon	ENSMUSG00000039182	ProperStrand	4	chr5	130300460	130300500	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-7.9077
chr11	115911394	115911411	protein_coding	Unk	exon	ENSMUSG00000020770	NonProperStrand	2	chr19	36908844	36908879	protein_coding	Tnks2	utr5	ENSMUSG00000024811	ProperStrand	133	1	-19.1147
chr19	5666668	5666684	protein_coding	Pcnxl3	exon	ENSMUSG00000054874	ProperStrand	96	chr7	52381719	52381758	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-6.6408
chr8	86747766	86747801	protein_coding	Zswim4	exon	ENSMUSG00000035671	ProperStrand	27	chr1	59539683	59539700	protein_coding	Fzd7	utr5	ENSMUSG00000041075	ProperStrand	373	1	-11.2668
chr17	56753069	56753342	protein_coding	Rpl36	exon	ENSMUSG00000057863	ProperStrand	62	chr3	108357358	108357418	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-4.4773
chr2	90235297	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	80674669	80675224	protein_coding	Atcay	exon	ENSMUSG00000034958	ProperStrand	94	1	-3.6186
chr15	88695814	88695904	protein_coding	Pim3	utr3	ENSMUSG00000035828	ProperStrand	66	chr19	8963084	8963164	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	8	-18.2341
chr14	19060005	19060105	protein_coding	Nr1d2	intron	ENSMUSG00000021775	NonProperStrand	2	chr11	62416578	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-12.5746
chr1	51814080	51814738	protein_coding	Myo1b	exon	ENSMUSG00000018417	ProperStrand	31	chr15	83770046	83770063	protein_coding	Efcab6	intron	ENSMUSG00000022441	ProperStrand	60	1	-14.6472
chr1	74470436	74470453	protein_coding	Vil1	exon	ENSMUSG00000026175	ProperStrand	68	chr15	34370661	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-3.3197
chr17	35299507	35299642	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	chr2	130101972	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	9	-1.5053
chr3	153575134	153575167	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	chr11	78150285	78150301	protein_coding	Pigs	exon	ENSMUSG00000041958	NonProperStrand	138	2	-11.0101
chr9	15119967	15120011	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	chr1	172975126	172975189	tRNA	tRNA699-GlyGCC	.	205493	ProperStrand	660	2	-4.6931
chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr11	22697421	22697439	pseudogene	Gm12057	.	ENSMUSG00000084081	ProperStrand	7	1	-10.8546
chr4	106259331	106259421	protein_coding	Dhcr24	utr3	ENSMUSG00000034926	ProperStrand	94	chr15	34370544	34370624	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-2.7419
mmu-miR-2137	1	21	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	chr2	83693562	83693578	protein_coding	Fam171b	exon	ENSMUSG00000048388	NonProperStrand	175	1	-9.4099
chr12	88034478	88034530	protein_coding	Vash1	intron	ENSMUSG00000021256	ProperStrand	12	chr10	23505149	23505230	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.9771
chr16	37884574	37884625	protein_coding	Lrrc58	utr3	ENSMUSG00000034158	ProperStrand	23	chr5	130357088	130357176	protein_coding	Chchd2	utr3	ENSMUSG00000070493	ProperStrand	16	4	-inf
chr8	125098613	125098668	protein_coding	Aprt	utr3	ENSMUSG00000006589	ProperStrand	20	chr1	39707543	39707559	protein_coding	Creg2	exon	ENSMUSG00000050967	ProperStrand	6	1	-19.1876
chr7	52717147	52717185	protein_coding	Bax	utr3	ENSMUSG00000003873	ProperStrand	24	chr7	52715053	52715106	protein_coding	Ftl1	utr5	ENSMUSG00000050708	ProperStrand	807	4	-inf
chr13	114397350	114397366	protein_coding	Snx18	intron	ENSMUSG00000042364	NonProperStrand	7	chr1	89673713	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-7.5185
chr17	73709802	73709818	protein_coding	Capn13	exon	ENSMUSG00000043705	ProperStrand	3	chr19	8963066	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-8.3179
chr15	82001618	82001634	protein_coding	Srebf2	exon	ENSMUSG00000022463	ProperStrand	592	chr19	8799845	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-1.0497
chr16	93035691	93035708	LTR	MLT1E1A	MaLR	chr16MLT1E1A93035688	ProperStrand	1	chr9	15118245	15118321	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-inf
chr11	88539806	88539832	protein_coding	Msi2	intron	ENSMUSG00000069769	ProperStrand	159	chr6	120715331	120715360	protein_coding	Cecr2	exon	ENSMUSG00000071226	ProperStrand	39	1	-12.2265
chr5	136365257	136365294	protein_coding	Hspb1	exon	ENSMUSG00000004951	ProperStrand	25	chr2	26494726	26494826	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.7537
chr17	15097082	15097172	protein_coding	Phf10	intron	ENSMUSG00000023883	ProperStrand	10	chr17	15062943	15063033	protein_coding	Wdr27	intron	ENSMUSG00000046991	NonProperStrand	4	1	-19.9092
chr4	94242265	94242345	protein_coding-noncoding	Plaa	utr3	ENSMUSG00000028577	ProperStrand	6	chr19	8963104	8963194	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	5	-19.1229
chr16	20680830	20681008	protein_coding	Eif4g1	exon	ENSMUSG00000045983	ProperStrand	199	chr18	48207401	48207481	protein_coding	Gm5506	exon	ENSMUSG00000059040	ProperStrand	105	3	-18.9748
chr5	108333912	108336296	protein_coding	Rpl5	exon	ENSMUSG00000058558	ProperStrand	235	chr19	8799581	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-4.1182
chr2	117945164	117945180	protein_coding	Thbs1	exon	ENSMUSG00000040152	ProperStrand	8	chr14	76247753	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-8.2107
chr9	15130803	15131004	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	chr11	6428076	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-1.4354
chr5	74489205	74489326	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr18	35102297	35102354	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	3	-1.3573
chr18	65638002	65638090	protein_coding	Malt1	utr3	ENSMUSG00000032688	ProperStrand	6	chr11	106362669	106362690	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-12.1528
chr6	91472444	91472534	protein_coding	Lsm3	utr3	ENSMUSG00000090846	ProperStrand	6	chr18	35714153	35714233	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-8.0481
chr11	62416951	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	chr4	122970395	122970485	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-0.9278
chr18	46527482	46527572	LTR	RMER17C	ERVK	chr18RMER17C46527448	NonProperStrand	1	chr18	46527289	46527369	Simple_repeat	(TG)n	Simple_repeat	chr18(TG)n46527268	ProperStrand	1	1	-inf
chr6	92104375	92104391	protein_coding	Nr2c2	exon	ENSMUSG00000005893	ProperStrand	101	chr3	142444521	142444540	protein_coding	Gtf2b	exon	ENSMUSG00000028271	ProperStrand	5	1	-17.4082
chr14	21194232	21194322	protein_coding	Fam149b	intron	ENSMUSG00000039599	NonProperStrand	3	chr14	20899343	20899423	protein_coding	1810063B07Rik	intron	ENSMUSG00000045107	NonProperStrand	5	1	-inf
chr7	87614635	87618948	protein_coding	Blm	exon	ENSMUSG00000030528	ProperStrand	35	chr15	98356836	98356900	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	1	-8.8357
chr2	26284469	26295535	protein_coding	Sec16a	exon	ENSMUSG00000026924	ProperStrand	86	chr18	35716761	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	12	-inf
chr12	88778638	88778680	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	chr11	62416950	62417028	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	2	-0.9962
chr13	23400913	23400934	lincRNA	4930557F10Rik	intron	ENSMUSG00000085488	ProperStrand	3	chr8	124927051	124927151	protein_coding	Zc3h18	exon	ENSMUSG00000017478	ProperStrand	55	1	-19.3719
chr8	125626585	125626653	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	chr6	94572713	94572730	protein_coding	Lrig1	exon	ENSMUSG00000030029	ProperStrand	26	1	-12.3020
chr16	17675006	17675093	protein_coding	Med15	intron	ENSMUSG00000012114	ProperStrand	24	chr13	97266647	97266664	protein_coding	Polk	exon	ENSMUSG00000021668	NonProperStrand	25	1	-16.8481
chr1	88423319	88426367	protein_coding	Ptma	utr5	ENSMUSG00000026238	ProperStrand	385	chr7	116663636	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	7	-4.4115
chr5	144076614	144076653	protein_coding	E130309D02Rik	exon	ENSMUSG00000039244	ProperStrand	12	chr7	52382237	52382290	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	3	-19.6667
chr2	19929215	19929295	protein_coding	Etl4	intron	ENSMUSG00000036617	ProperStrand	86	chr2	38830751	38830841	pseudogene	Gm13474	.	ENSMUSG00000084184	NonProperStrand	1	1	-inf
chr6	66214409	66214499	LTR	ORR1D1-int	MaLR	chr6ORR1D1-int66214019	NonProperStrand	1	chr6	66214683	66214763	LTR	ORR1D1	MaLR	chr6ORR1D166214642	NonProperStrand	1	1	-inf
chr10	120709244	120712786	protein_coding	Tbc1d30	exon	ENSMUSG00000052302	ProperStrand	233	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-5.0710
chr15	51818525	51818557	protein_coding	Rad21	intron	ENSMUSG00000022314	ProperStrand	85	chr3	123210854	123210890	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.5257
chr2	181285143	181285228	protein_coding	Dnajc5	utr3	ENSMUSG00000000826	ProperStrand	14	chr7	148634803	148634836	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-11.1300
chr1	102076758	102076792	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	chr13	51743567	51743661	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-3.1555
chr4	137109642	137109660	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	1	-6.4939
chr8	3568023	3568039	protein_coding	C330021F23Rik	utr5	ENSMUSG00000065952	NonProperStrand	85	chr18	54066249	54066267	protein_coding	Csnk1g3	exon	ENSMUSG00000073563	ProperStrand	13	1	-15.7194
chr14	106505931	106506021	protein_coding	Trim52	utr5	ENSMUSG00000022113	NonProperStrand	10	chr16	23110899	23110961	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	NonProperStrand	93	2	-20.0774
chr13	75977357	75977427	protein_coding	Glrx	utr5	ENSMUSG00000021591	ProperStrand	7	chr13	23647593	23647644	protein_coding	Hist1h1d	utr3	ENSMUSG00000052565	ProperStrand	78	1	-17.2695
chr2	89368462	89368480	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	chr11	69483136	69483278	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	7	-6.4652
chrX	159216669	159216707	protein_coding	Rbbp7	utr3	ENSMUSG00000031353	ProperStrand	48	chr9	120038552	120038607	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-5.8809
chr18	61416665	61416681	protein_coding	Pde6a	exon	ENSMUSG00000024575	ProperStrand	10	chrX	132673816	132673833	protein_coding	Bex4	intron	ENSMUSG00000047844	NonProperStrand	70	1	-16.6757
chr13	23854174	23854227	protein_coding	Hist1h3a	utr5	ENSMUSG00000069265	ProperStrand	12	chr1	63225282	63225322	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	1	-12.1163
chr11	120208406	120208469	protein_coding	Actg1	exon	ENSMUSG00000062825	ProperStrand	178	chr3	157729963	157729979	protein_coding	Lrrc40	utr3	ENSMUSG00000063052	ProperStrand	147	1	-9.3348
chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	chr2	26493405	26493476	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-0.6954
chr8	126026844	126026934	protein_coding	Afg3l1	utr3	ENSMUSG00000031967	ProperStrand	29	chr14	76247725	76247785	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	3	-13.0492
chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr17	24856620	24856735	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	4	-3.2705
chr7	90790196	90790226	protein_coding	Stard5	utr3	ENSMUSG00000046027	ProperStrand	2	chr1	162968245	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	2	-inf
chr1	56997556	56997573	protein_coding	Satb2	intron	ENSMUSG00000038331	NonProperStrand	24	chr7	52382011	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-8.5501
chr11	79987895	79987912	antisense	Gm11206	.	ENSMUSG00000086507	ProperStrand	8	chr1	36864976	36865008	protein_coding	Tmem131	exon	ENSMUSG00000026116	ProperStrand	129	1	-15.8979
chr6	89285477	89287150	protein_coding	Plxna1	exon	ENSMUSG00000030084	NonProperStrand	19	chr7	5062342	5062361	protein_coding	Rfpl4	exon	ENSMUSG00000035191	NonProperStrand	27	1	-17.2075
chr17	56257328	56257344	LTR	RLTR25B	ERVK	chr17RLTR25B56257276	NonProperStrand	75	chr4	148704444	148705466	protein_coding	Ube4b	exon	ENSMUSG00000028960	ProperStrand	66	1	-12.6737
chr14	56389353	56390228	protein_coding	Adcy4	exon	ENSMUSG00000022220	ProperStrand	29	chrX	132335909	132335974	protein_coding	Gprasp1	exon	ENSMUSG00000043384	ProperStrand	57	1	-14.8790
chr3	107272845	107272861	protein_coding	Slc6a17	utr3	ENSMUSG00000027894	ProperStrand	16	chr10	80643781	80643814	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-8.7566
chrX	130830178	130830195	protein_coding	Tmem35	intron	ENSMUSG00000033578	ProperStrand	16	chr16	23111384	23111436	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.4608
chr2	83443967	83443984	LINE	Lx8	L1	chr2Lx883443923	ProperStrand	1	chr4	43505711	43505801	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	NonProperStrand	174	1	-inf
chr19	34999238	34999254	protein_coding	Kif20b	exon	ENSMUSG00000024795	NonProperStrand	28	chr19	8963118	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.6314
chr18	70116406	70116496	antisense	1700061H18Rik	.	ENSMUSG00000084948	ProperStrand	1	chr3	126495304	126495384	protein_coding	Camk2d	intron	ENSMUSG00000053819	NonProperStrand	20	1	-inf
chr19	10698040	10699225	protein_coding	Ddb1	exon	ENSMUSG00000024740	ProperStrand	304	chr7	52381975	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-3.5883
chr8	13416895	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr17	35299506	35299641	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	9	-4.4109
chr6	83318462	83318562	protein_coding	Tet3	exon	ENSMUSG00000034832	ProperStrand	10	chr1	162967525	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-6.9960
chr2	79132657	79132674	protein_coding-noncoding	Itga4	utr5	ENSMUSG00000027009	NonProperStrand	118	chr2	158182180	158182278	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	2	-6.2843
chr6	71390277	71390298	protein_coding	Rmnd5a	utr5	ENSMUSG00000002222	NonProperStrand	4	chr1	84718812	84718872	protein_coding	Trip12	utr3	ENSMUSG00000026219	ProperStrand	248	1	-16.1224
chr7	52158562	52159202	protein_coding	Ap2a1	exon	ENSMUSG00000060279	NonProperStrand	4	chr16	23110937	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	NonProperStrand	93	4	-inf
chr4	120725769	120725785	protein_coding	Col9a2	exon	ENSMUSG00000028626	ProperStrand	35	chr7	52378414	52378481	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	1	-9.5887
chr2	119642958	119643044	protein_coding	Tyro3	utr3	ENSMUSG00000027298	ProperStrand	35	chr2	26768408	26768432	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-6.6671
chr12	52903643	52903734	protein_coding	Hectd1	exon	ENSMUSG00000035247	ProperStrand	41	chr11	69483144	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-7.9530
chr5	76582565	76582641	protein_coding	Srd5a3	exon	ENSMUSG00000029233	ProperStrand	11	chr1	88247768	88247858	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-8.5056
chr5	125343751	125343768	protein_coding	Zfp664	utr5	ENSMUSG00000079215	ProperStrand	47	chr2	26494708	26494802	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	4	-11.8830
chr1	58228679	58228696	protein_coding	Aox3	exon	ENSMUSG00000064294	ProperStrand	39	chr2	26494708	26494760	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.9010
chr16	45627798	45627817	protein_coding	BC016579	utr3	ENSMUSG00000033187	ProperStrand	13	chr4	131908805	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.8088
chr10	75969147	75969215	protein_coding	Mcm3ap	exon	ENSMUSG00000001150	ProperStrand	95	chr10	23505188	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-3.5670
chr12	103604268	103604285	protein_coding	Rin3	intron	ENSMUSG00000044456	ProperStrand	26	chr2	145076804	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-9.4069
chr9	75017388	75017444	protein_coding	Myo5a	intron	ENSMUSG00000034593	ProperStrand	89	chr7	118219705	118219727	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	4	-11.5007
chr18	34770786	34770886	protein_coding	Brd8	exon	ENSMUSG00000003778	ProperStrand	27	chr6	114260511	114260527	protein_coding	Slc6a1	exon	ENSMUSG00000030310	NonProperStrand	147	1	-13.1317
chr14	65372866	65372889	snoRNA	ENSMUSG00000064442_SNORA36	.	ENSMUSG00000064442	ProperStrand	296	chr17	35299507	35299607	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-1.9181
chr5	26735615	26735631	SINE	B4A	B4	chr5B4A26735491	ProperStrand	1	chr1	183853808	183853856	protein_coding	Enah	exon	ENSMUSG00000022995	ProperStrand	196	1	-inf
chr13	114945734	114945761	protein_coding	Arl15	utr3	ENSMUSG00000042348	ProperStrand	51	chr5	74489543	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-4.0832
chr7	53088385	53088403	protein_coding	Grin2d	exon	ENSMUSG00000002771	ProperStrand	3	chr11	69483194	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-8.5256
chrX	130496426	130496668	protein_coding	Sytl4	exon	ENSMUSG00000031255	ProperStrand	169	chr19	47438010	47438064	protein_coding	Sh3pxd2a	intron	ENSMUSG00000053617	ProperStrand	57	1	-11.3387
chr12	111932893	111933320	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr15	98356816	98356869	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	1	-2.9091
chr14	32079059	32079080	protein_coding	Dnahc1	utr3	ENSMUSG00000019027	NonProperStrand	12	chr8	109535578	109535620	protein_coding	Sntb2	utr3	ENSMUSG00000041308	ProperStrand	41	3	-inf
chr18	41356147	41356185	miRNA	Mir5097	dead	ENSMUSG00000093361	ProperStrand	221	chr7	117189864	117189980	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	5	-7.0286
chr11	28483735	28483751	protein_coding	Ccdc85a	utr5	ENSMUSG00000032878	NonProperStrand	4	chr11	5180669	5180685	protein_coding	Znrf3	utr3	ENSMUSG00000041961	NonProperStrand	210	1	-16.4856
chr2	25438572	25438652	protein_coding	B230208H17Rik	utr3	ENSMUSG00000015087	ProperStrand	25	chr9	120037906	120037996	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-6.4260
chr3	87329486	87329505	protein_coding	Etv3	utr5	ENSMUSG00000003382	ProperStrand	7	chr16	23110942	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.4785
chr13	104861891	104861961	protein_coding	Nln	intron	ENSMUSG00000021710	ProperStrand	47	chr16	23111416	23111447	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.6112
chr12	109345048	109345112	protein_coding	Setd3	utr3	ENSMUSG00000056770	ProperStrand	21	chr16	23111475	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-5.1714
chr11	106582432	106582522	protein_coding	Pecam1	intron	ENSMUSG00000020717	ProperStrand	56	chrX	34622940	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	16	-20.4002
chr11	75114463	75114563	protein_coding	Rpa1	utr3	ENSMUSG00000000751	ProperStrand	37	chr3	41419579	41419602	protein_coding	Phf17	utr3	ENSMUSG00000025764	ProperStrand	101	12	-20.1669
chr18	73693113	73693189	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr11	6520321	6520421	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	5	-5.3403
chr15	55449225	55449242	protein_coding	Mtbp	exon	ENSMUSG00000022369	ProperStrand	12	chr16	23111381	23111436	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.0123
chr10	75398669	75398992	protein_coding	Chchd10	utr5	ENSMUSG00000049422	ProperStrand	140	chr19	8800355	8800434	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-2.0535
chr11	75466244	75466344	protein_coding	Myo1c	intron	ENSMUSG00000017774	ProperStrand	38	chr3	148579898	148579919	protein_coding	Lphn2	intron	ENSMUSG00000028184	ProperStrand	20	1	-16.4374
chr4	140507754	140507805	protein_coding	Padi2	utr3	ENSMUSG00000028927	ProperStrand	24	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-10.0279
chr12	87630309	87630370	protein_coding	1700020O03Rik	utr3	ENSMUSG00000021254	ProperStrand	4	chr14	76247753	76247840	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-9.7427
chr4	44072955	44072972	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr7	117189863	117189922	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	2	-1.5244
chr9	24549571	24549601	protein_coding	Tbx20	intron	ENSMUSG00000031965	NonProperStrand	110	chr7	148634792	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	3	-7.3877
chr17	32335126	32335173	protein_coding	Brd4	exon	ENSMUSG00000024002	ProperStrand	121	chr15	79913288	79913332	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.3495
chr10	6450631	6450649	protein_coding	Plekhg1	intron	ENSMUSG00000040624	NonProperStrand	75	chr7	52632592	52632731	protein_coding	Snrnp70	utr5	ENSMUSG00000063511	ProperStrand	61	1	-12.8318
chr9	15068124	15068163	protein_coding	Med17	exon	ENSMUSG00000031935	ProperStrand	135	chr18	35716685	35716761	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	5	-6.1678
chr2	90235304	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr14	108986504	108986521	LTR	MTE-int	MaLR	chr14MTE-int108986408	ProperStrand	32	1	-5.6851
chr12	17552964	17552994	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr1	161270493	161270554	snoRNA	ENSMUSG00000089536_Scarna3a	.	ENSMUSG00000089536	ProperStrand	247	1	-2.4819
chr1	162965547	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr17	71990218	71990264	snoRNA	ENSMUSG00000092887_Snord53	.	ENSMUSG00000092887	ProperStrand	53	3	-8.7325
chr4	131006463	131006543	LTR	ORR1A4	MaLR	chr4ORR1A4131006478	NonProperStrand	1	chr8	70725690	70725780	LTR	RMER13B	ERVK	chr8RMER13B70725121	ProperStrand	1	1	-inf
chr11	6428045	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr2	130103431	130103502	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	7	-2.5286
chr5	136611800	136611816	protein_coding	Lrwd1	exon	ENSMUSG00000029703	NonProperStrand	51	chr4	138998680	138998732	protein_coding	Ubr4	exon	ENSMUSG00000066036	ProperStrand	304	1	-10.3885
chr16	64857910	64857941	protein_coding	Cggbp1	utr3	ENSMUSG00000054604	ProperStrand	7	chr4	131908689	131908797	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.0493
chr15	76497859	76497919	protein_coding	Kifc2	utr3	ENSMUSG00000004187	ProperStrand	1	chrX	72330027	72330044	protein_coding	Gab3	exon	ENSMUSG00000032750	NonProperStrand	6	1	-inf
chr11	102767564	102767833	protein_coding	Kif18b	exon	ENSMUSG00000051378	ProperStrand	43	chr4	131908323	131908413	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-3.5130
chr14	112754135	112754154	LINE	Lx4B	L1	chr14Lx4B112753525	NonProperStrand	4	chr5	130300468	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-19.2399
chr12	25272403	25272420	protein_coding	Grhl1	intron	ENSMUSG00000020656	ProperStrand	7	chr5	76613176	76613193	protein_coding	Tmem165	exon	ENSMUSG00000029234	NonProperStrand	3	1	-inf
chr7	82269025	82270481	protein_coding	Sv2b	exon	ENSMUSG00000053025	ProperStrand	9	chr10	127521200	127521271	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	2	-21.1163
chrX	71589885	71589904	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr19	8799854	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-2.0869
chr18	33957052	33957068	protein_coding	Epb4.1l4a	exon	ENSMUSG00000024376	ProperStrand	16	chr11	4820972	4820990	protein_coding	Thoc5	intron	ENSMUSG00000034274	ProperStrand	325	1	-12.6141
chr16	87377145	87377161	protein_coding	Ltn1	utr3	ENSMUSG00000052299	ProperStrand	49	chrX	34622958	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-3.5413
chr11	46250547	46250576	protein_coding	Med7	utr5	ENSMUSG00000020397	ProperStrand	3	chr16	23111451	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-6.9982
chr17	68159211	68159311	protein_coding	Lama1	exon	ENSMUSG00000032796	ProperStrand	168	chr11	77996557	77996618	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	7	-19.1053
chr5	45884798	45886461	protein_coding	Lap3	exon	ENSMUSG00000039682	ProperStrand	87	chr18	73693115	73693137	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	3	-11.3739
chr10	39978350	39978440	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	chr4	131866608	131866649	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	1	-1.6828
chr17	5347022	5347040	protein_coding	Arid1b	utr3	ENSMUSG00000069729	NonProperStrand	22	chr7	117166804	117166855	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-6.7961
chr1	133727454	133727526	protein_coding	Slc41a1	exon	ENSMUSG00000013275	ProperStrand	19	chr16	23110990	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-5.0037
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr12	106269324	106269414	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-1.6248
chr18	16135797	16135877	LINE	L1VL4	L1	chr18L1VL416135377	ProperStrand	1	chrX	76969281	76969371	LINE	L1VL2	L1	chrXL1VL276968806	ProperStrand	1	1	-inf
chr12	73317935	73318408	protein_coding	Rtn1	exon	ENSMUSG00000021087	NonProperStrand	10	chr16	43886804	43886894	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	1	-11.7331
chr11	77996560	77996597	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	chr6	38483965	38483995	tRNA	tRNA107-ArgCCT	.	159507	ProperStrand	63	4	-17.9369
chr18	73835590	73837381	protein_coding	Smad4	exon	ENSMUSG00000024515	ProperStrand	51	chr3	123210854	123210891	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.3354
chr11	42440243	42440259	protein_coding	Gabrb2	exon	ENSMUSG00000007653	ProperStrand	248	chr10	80959040	80959072	protein_coding	Ncln	utr5	ENSMUSG00000020238	ProperStrand	18	1	-12.9108
chr18	75160711	75160763	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	chr11	69483136	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	5	-1.6623
chr4	115484059	115484086	protein_coding	Atpaf1	utr3	ENSMUSG00000028710	ProperStrand	202	chr5	108336363	108336408	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-2.6408
chr7	52382234	52382299	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	chr1	59761635	59761693	snoRNA	ENSMUSG00000089093_Snord11	.	ENSMUSG00000089093	ProperStrand	193	4	-17.9752
chr2	129998674	129998707	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chrX	132378874	132379001	protein_coding	Gprasp2	utr3	ENSMUSG00000072966	ProperStrand	11	8	-21.7555
chr6	119894766	119896273	protein_coding	Wnk1	exon	ENSMUSG00000045962	ProperStrand	221	chr9	15118324	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	6	-9.3838
chr10	14375624	14380934	protein_coding	Vta1	exon	ENSMUSG00000019868	ProperStrand	12	chr11	69481393	69481473	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-6.3220
chr5	23825941	23825957	protein_coding	Kcnh2	exon	ENSMUSG00000038319	ProperStrand	242	chr7	80520589	80520647	protein_coding	Rgma	utr5	ENSMUSG00000070509	ProperStrand	46	1	-11.0526
chr7	139833256	139834171	protein_coding	Lhpp	exon	ENSMUSG00000030946	ProperStrand	35	chr9	59523468	59523517	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	1	-8.2576
chr16	11254026	11254085	protein_coding	Gspt1	utr5	ENSMUSG00000062203	ProperStrand	49	chr11	97642952	97642976	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.8235
chrX	7182489	7182506	protein_coding	Ccdc22	utr5	ENSMUSG00000031143	NonProperStrand	51	chr5	108336362	108336409	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-5.1961
chr9	65125781	65125798	protein_coding	Cilp	exon	ENSMUSG00000042254	NonProperStrand	3	chr5	130300443	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-14.5460
chr17	95160908	95218242	protein_coding	2610044O15Rik	exon	ENSMUSG00000066057	NonProperStrand	70	chr5	108334238	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	2	-7.5210
chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	chr3	83702405	83702458	protein_coding	D930015E06Rik	exon	ENSMUSG00000033767	ProperStrand	17	1	-12.8379
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr7	95266597	95266613	protein_coding	Grm5	intron	ENSMUSG00000049583	NonProperStrand	145	1	-7.6072
chrX	130496426	130496668	protein_coding	Sytl4	exon	ENSMUSG00000031255	ProperStrand	169	chr5	110877411	110877464	protein_coding	Fbrsl1	utr5	ENSMUSG00000043323	ProperStrand	131	1	-9.6688
chr13	68460826	68460916	LINE	L1Md_A	L1	chr13L1Md_A68458559	ProperStrand	1	chr7	54443398	54443478	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-inf
chr6	115085043	115085060	protein_coding	Syn2	utr5	ENSMUSG00000009394	NonProperStrand	8	chr17	35089184	35089231	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-9.5771
chrX	131140268	131140358	protein_coding	Hnrnph2	exon	ENSMUSG00000045427	ProperStrand	111	chr19	8800387	8800467	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	3	-6.4497
chr11	17846278	17846378	protein_coding	Etaa1	exon	ENSMUSG00000016984	ProperStrand	7	chr10	23505152	23505214	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-5.0629
chr19	5843463	5843563	non_coding	Neat1	.	ENSMUSG00000092274	ProperStrand	63	chr9	120037985	120038027	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-4.6121
chr6	148871403	148871460	protein_coding	Fam60a	exon	ENSMUSG00000039985	ProperStrand	68	chr11	55296280	55296335	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-5.9335
chrX	71195200	71195300	protein_coding	Hcfc1	exon	ENSMUSG00000031386	ProperStrand	424	chr10	84582284	84582300	protein_coding	Mterfd3	utr3	ENSMUSG00000049038	NonProperStrand	13	1	-12.5126
chr2	105520620	105520638	protein_coding	Pax6	intron	ENSMUSG00000027168	ProperStrand	13	chr7	148433284	148434315	protein_coding	Phrf1	exon	ENSMUSG00000038611	ProperStrand	86	1	-15.7051
chr1	45488603	45488620	protein_coding	Col5a2	intron	ENSMUSG00000026042	ProperStrand	184	chr1	158610981	158611032	protein_coding	Fam20b	utr3	ENSMUSG00000033557	ProperStrand	15	1	-13.8917
chr17	35822057	35822257	protein_coding	Ddr1	exon	ENSMUSG00000003534	ProperStrand	129	chr7	52309977	52309993	protein_coding	Prrg2	exon	ENSMUSG00000007837	NonProperStrand	281	1	-8.6852
chr10	79499319	79499540	protein_coding	Polr2e	exon	ENSMUSG00000004667	ProperStrand	37	chr16	23111372	23111462	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-7.6960
chr4	154624967	154625047	protein_coding	2610002J02Rik	exon	ENSMUSG00000073684	ProperStrand	18	chr4	131865418	131865508	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-6.3553
chr14	15572351	15572370	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr2	21747979	21747995	protein_coding	Gpr158	exon	ENSMUSG00000045967	ProperStrand	11	1	-14.7415
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	34779160	34779177	protein_coding	Fam193a	exon	ENSMUSG00000037210	ProperStrand	41	1	-5.1984
chr11	3426352	3426368	protein_coding	Smtn	exon	ENSMUSG00000020439	ProperStrand	222	chrX	34622972	34623025	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-1.0877
chr8	126553805	126553905	protein_coding	Urb2	exon	ENSMUSG00000031976	ProperStrand	64	chr10	23505152	23505214	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.1465
chr2	26493442	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr14	66743208	66743224	protein_coding	Ephx2	exon	ENSMUSG00000022040	NonProperStrand	6	1	-10.9258
chr15	82551429	82551519	LTR	RMER16	ERVK	chr15RMER1682551267	ProperStrand	1	chr3	35942685	35942765	protein_coding	Ccdc144b	intron	ENSMUSG00000047696	ProperStrand	2	1	-inf
chr4	120596229	120596270	protein_coding	Dem1	intron	ENSMUSG00000028629	ProperStrand	3	chr11	97643002	97643092	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-8.5513
chr10	128202206	128202675	protein_coding	Wibg	exon	ENSMUSG00000064030	ProperStrand	5	chr4	131865454	131865515	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	2	-14.7206
chr3	88734466	88734872	protein_coding	Dap3	exon	ENSMUSG00000068921	ProperStrand	58	chr8	98269959	98269993	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	3	-13.0307
chr11	6428035	6428170	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr1	162967489	162967570	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	61	-3.7396
chr9	99483993	99484009	protein_coding	Dbr1	exon	ENSMUSG00000032469	ProperStrand	162	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.6093
chr2	165306779	165306859	LINE	L1MB7	L1	chr2L1MB7165306643	NonProperStrand	1	chr2	165307018	165307108	SINE	B4A	B4	chr2B4A165306974	NonProperStrand	1	1	-inf
chr9	107871687	107871704	protein_coding	Traip	intron	ENSMUSG00000032586	ProperStrand	3	chr17	13115655	13115724	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	1	-13.8927
chrX	135771753	135771769	protein_coding	Mum1l1	utr3	ENSMUSG00000042515	ProperStrand	21	chr2	91436228	91436336	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-9.6143
chr8	122049417	122049442	protein_coding	Mbtps1	exon	ENSMUSG00000031835	ProperStrand	81	chr12	88488443	88496424	protein_coding	Pomt2	exon	ENSMUSG00000034126	NonProperStrand	331	1	-9.2892
chr16	23111373	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	chr11	6520320	6520458	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	32	-7.7025
chr2	22445733	22445792	pseudogene	Gm13339	.	ENSMUSG00000082884	ProperStrand	24	chr1	162965989	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-8.8327
chr8	117494046	117494063	protein_coding	Wwox	intron	ENSMUSG00000004637	NonProperStrand	16	chr2	26493391	26493461	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-6.3192
chr9	54759679	54759695	protein_coding	Ireb2	utr3	ENSMUSG00000032293	ProperStrand	45	chr6	72389161	72389177	protein_coding	Mat2a	intron	ENSMUSG00000053907	NonProperStrand	11	1	-17.3178
chr9	120039380	120039430	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	chr11	97643000	97643090	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	5	-2.2543
chr13	34220748	34220779	protein_coding	Tubb2b	exon	ENSMUSG00000045136	ProperStrand	49	chr7	29136553	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	5	-12.4182
chr9	108464693	108465183	protein_coding	Impdh2	exon	ENSMUSG00000062867	ProperStrand	74	chr16	23110470	23110560	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.1114
chr8	74492643	74492704	protein_coding	Zfp961	exon	ENSMUSG00000052446	ProperStrand	35	chr16	23111374	23111464	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.0755
chr19	30166531	30166601	protein_coding	Uhrf2	exon	ENSMUSG00000024817	ProperStrand	40	chr17	13112482	13112572	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	6	-19.0950
chr8	42078629	42078647	protein_coding	Mtus1	utr3	ENSMUSG00000045636	NonProperStrand	5	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-12.8963
chr11	120148960	120148976	protein_coding	Bahcc1	exon	ENSMUSG00000039741	NonProperStrand	268	chr14	33005060	33005139	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-1.4426
chr5	130578293	130578381	protein_coding	Tpst1	exon	ENSMUSG00000034118	ProperStrand	22	chr16	23110913	23111003	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.4786
chr15	82210572	82210588	protein_coding	Cyp2d22	utr5	ENSMUSG00000061740	NonProperStrand	18	chr19	8800084	8800118	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-10.0413
chr19	56003755	56003771	protein_coding	Tcf7l2	intron	ENSMUSG00000024985	ProperStrand	103	chr4	131815819	131815848	protein_coding	Gmeb1	intron	ENSMUSG00000028901	ProperStrand	15	1	-15.0550
chr4	25750374	25750464	LINE	L1_Mur2	L1	chr4L1_Mur225749448	NonProperStrand	1	chr4	25750671	25750761	Other	RMER1B	Other	chr4RMER1B25750576	ProperStrand	1	1	-inf
chr6	128324556	128324607	protein_coding	Foxm1	utr3	ENSMUSG00000001517	ProperStrand	31	chr9	120037898	120037978	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-5.9972
chr14	8999234	8999324	protein_coding	Pdhb	exon	ENSMUSG00000021748	ProperStrand	28	chr5	111121101	111121181	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-7.9576
chr14	31867350	31867368	protein_coding	Pbrm1	exon	ENSMUSG00000042323	ProperStrand	87	chr19	8798750	8798811	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-4.0927
chr15	72638704	72638722	protein_coding	Trappc9	intron	ENSMUSG00000047921	NonProperStrand	53	chr4	131908688	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-4.1801
chr4	43505656	43505757	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr10	87938133	87938149	protein_coding	Chpt1	utr3	ENSMUSG00000060002	ProperStrand	15	1	-5.7264
chr16	18951270	18951370	protein_coding	Hira	exon	ENSMUSG00000022702	ProperStrand	28	chr16	23110969	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.1386
chr5	121703073	121703153	protein_coding	Gm15800	intron	ENSMUSG00000042744	ProperStrand	47	chr16	84809178	84809268	protein_coding	Jam2	intron	ENSMUSG00000053062	NonProperStrand	3	1	-inf
chr3	137849424	137849440	protein_coding	4930579F01Rik	utr5	ENSMUSG00000012042	NonProperStrand	156	chr9	120039258	120039310	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	1	-7.6152
chr5	130295426	130295516	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	chr15	79908932	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	15	-8.5077
chr15	81517518	81517582	protein_coding	L3mbtl2	utr3	ENSMUSG00000022394	ProperStrand	19	chr11	55296216	55296272	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	2	-13.5645
chr17	15841996	15842096	protein_coding	Chd1	utr5	ENSMUSG00000023852	ProperStrand	82	chr14	33005038	33005091	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-3.4139
chr18	50024576	50024635	protein_coding	Dmxl1	exon	ENSMUSG00000037416	ProperStrand	27	chr19	8799038	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	3	-16.7851
chr15	99329179	99329195	protein_coding	Faim2	utr3	ENSMUSG00000023011	ProperStrand	45	chr19	8798743	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	2	-8.8006
chr10	6063958	6063977	protein_coding	Akap12	intron	ENSMUSG00000038587	ProperStrand	1008	chr8	73419657	73419757	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	5	-0.7283
chr19	44375929	44377534	protein_coding	Scd2	exon	ENSMUSG00000025203	ProperStrand	219	chr2	89368462	89368478	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	1	-7.7709
chr4	46473074	46473094	protein_coding	Anp32b	exon	ENSMUSG00000028333	ProperStrand	229	chr7	52067648	52067739	protein_coding	Atf5	utr3	ENSMUSG00000038539	ProperStrand	11	1	-14.0918
chr8	113234369	113234466	protein_coding	Vac14	intron	ENSMUSG00000010936	ProperStrand	27	chr2	163841845	163841861	protein_coding	Ywhab	exon	ENSMUSG00000018326	ProperStrand	33	1	-16.1100
chr17	56423708	56423791	protein_coding	Plin3	exon	ENSMUSG00000024197	ProperStrand	23	chr5	49004546	49004565	protein_coding	Kcnip4	intron	ENSMUSG00000029088	NonProperStrand	11	1	-18.6114
chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	chr7	52382237	52382314	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-4.5368
chr5	15176990	15177080	LTR	ORR1C1	MaLR	chr5ORR1C115176866	ProperStrand	2	chr4	131865865	131865945	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-inf
chr19	41990170	41990237	protein_coding	Pgam1	exon	ENSMUSG00000011752	ProperStrand	124	chr17	71326565	71326581	protein_coding	Myl12b	utr5	ENSMUSG00000034868	ProperStrand	35	1	-12.9461
chr7	88489430	88489446	protein_coding	Rps17	intron	ENSMUSG00000061787	ProperStrand	105	chr11	106362638	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-6.2957
chr16	17567123	17567153	protein_coding	P2rx6	intron	ENSMUSG00000022758	ProperStrand	3	chr18	60937530	60938088	protein_coding	Rps14	exon	ENSMUSG00000024608	ProperStrand	154	1	-17.7918
chr11	86658507	86658567	SINE	B1_Mm	Alu	chr11B1_Mm86658510	ProperStrand	1	chr4	43505757	43505847	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	1	-inf
chr1	177615741	177615831	protein_coding	Opn3	intron	ENSMUSG00000026525	ProperStrand	31	chr16	23110920	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-4.8130
mmu-miR-466i-5p	1	17	miRNA	mmu-miR-466i-5p	.	mmu-miR-466i-5p	NonProperStrand	3	chr2	26493391	26493470	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-16.6513
chr13	3550302	3553707	protein_coding	Gdi2	exon	ENSMUSG00000021218	ProperStrand	49	chr17	43593019	43593036	protein_coding	Gpr116	utr3	ENSMUSG00000056492	ProperStrand	14	1	-16.7740
chr6	34262745	34262761	antisense	Gm14546	.	ENSMUSG00000086762	ProperStrand	2	chr7	29136525	29136559	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-9.5181
chr6	134657632	134657722	protein_coding	Loh12cr1	intron	ENSMUSG00000042992	ProperStrand	16	chr15	34370597	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-6.1134
chr2	90235294	90235341	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	57245172	57245273	protein_coding	Serinc1	exon	ENSMUSG00000019877	ProperStrand	22	1	-6.4314
chr15	102844825	102844841	protein_coding	Hoxc5	exon	ENSMUSG00000022485	ProperStrand	40	chr15	98350203	98350270	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-5.5496
chr4	131908236	131908273	lincRNA	Gm17300	exon	ENSMUSG00000091021	ProperStrand	109	chr16	11144176	11144276	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	1	-9.2627
chr2	22445512	22445530	protein_coding	Myo3a	intron	ENSMUSG00000025716	NonProperStrand	7	chr4	128867196	128867212	protein_coding	Yars	exon	ENSMUSG00000028811	ProperStrand	131	1	-16.1449
chr10	85512442	85512459	protein_coding	Fbxo7	utr3	ENSMUSG00000001786	ProperStrand	13	chr10	23505152	23505277	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-6.5499
chr4	131865855	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr1	187066840	187066917	snoRNA	ENSMUSG00000077571_Snora36b	.	ENSMUSG00000077571	ProperStrand	244	3	-1.0255
chr5	130300416	130300439	protein_coding	Cct6a	intron	ENSMUSG00000029447	ProperStrand	128	chr5	130300441	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	12	-inf
chr18	38469309	38469326	protein_coding	Rnf14	exon	ENSMUSG00000060450	NonProperStrand	9	chr18	33954815	33954891	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-7.2497
chr11	106115156	106116102	protein_coding	Ftsj3	exon	ENSMUSG00000020706	ProperStrand	64	chr15	99578740	99578777	protein_coding	Lass5	intron	ENSMUSG00000023021	ProperStrand	27	1	-14.7929
chr7	52378401	52378423	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	chr8	98269999	98270096	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	3	-3.9123
chr1	60545638	60545654	protein_coding	Raph1	intron	ENSMUSG00000026014	NonProperStrand	15	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-10.5494
chr2	130440843	130440907	protein_coding	Fastkd5	exon	ENSMUSG00000079043	ProperStrand	9	chr4	131908236	131908275	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-11.8511
chr17	6232006	6232022	protein_coding	Tulp4	exon	ENSMUSG00000034377	NonProperStrand	265	chr18	35716808	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-0.7529
chr11	97362508	97362531	protein_coding	Arhgap23	utr3	ENSMUSG00000049807	ProperStrand	80	chr2	130102007	130102053	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-4.7992
chr9	65889745	65889846	protein_coding	Csnk1g1	utr3	ENSMUSG00000032384	ProperStrand	31	chr7	29136611	29136650	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-6.0461
chr2	121854619	121854635	protein_coding	Eif3j	exon	ENSMUSG00000027236	ProperStrand	15	chr15	79908958	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-8.2499
chr10	7639656	7639756	protein_coding	Tab2	exon	ENSMUSG00000015755	ProperStrand	41	chr9	64023292	64023329	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	7	-20.3584
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chrX	38920774	38920792	protein_coding	Gria3	intron	ENSMUSG00000001986	NonProperStrand	6	1	-9.1372
chr9	65127126	65127142	protein_coding	Cilp	exon	ENSMUSG00000042254	ProperStrand	212	chrX	84483704	84483760	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-5.7514
chr17	45704994	45705188	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr8	63386072	63386132	protein_coding	2700029M09Rik	intron	ENSMUSG00000038005	ProperStrand	7	1	-11.1351
chr8	107857165	107857255	protein_coding	Fhod1	exon	ENSMUSG00000014778	ProperStrand	64	chr5	108336384	108336464	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-4.7565
chr2	26494766	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	chr11	74718964	74719010	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	5	-2.6622
chr2	26294554	26294623	protein_coding	Sec16a	exon	ENSMUSG00000026924	ProperStrand	86	chr11	55296311	55296332	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	2	-8.9574
chr10	7350768	7357816	protein_coding	Pcmt1	utr3	ENSMUSG00000019795	ProperStrand	55	chr2	135820133	135824416	protein_coding	Plcb4	exon	ENSMUSG00000039943	NonProperStrand	57	1	-13.5880
chr8	26826018	26826090	protein_coding	Whsc1l1	utr3	ENSMUSG00000054823	ProperStrand	36	chr15	34370545	34370629	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-4.5131
chr11	83107805	83107902	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	chr11	106586569	106586590	snoRNA	ENSMUSG00000080664_U3	.	ENSMUSG00000080664	ProperStrand	4	4	-inf
chr7	133707257	133708010	protein_coding	Eif3c	exon	ENSMUSG00000030738	ProperStrand	92	chr8	113579235	113579315	protein_coding	Aars	utr3	ENSMUSG00000031960	ProperStrand	355	1	-8.8949
chr17	24665455	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	chr10	23505559	23505594	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	2	-0.9414
chr14	51427119	51427219	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr10	20080842	20080858	protein_coding	Fam54a	utr3	ENSMUSG00000019992	ProperStrand	232	1	-4.5664
chr17	46860839	46860857	protein_coding-noncoding	Pex6	utr5	ENSMUSG00000002763	NonProperStrand	1	chrX	34622960	34623025	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-inf
chr5	134672297	134672314	protein_coding	Gtf2ird2	exon	ENSMUSG00000015942	ProperStrand	2	chr3	123210854	123210876	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-9.1566
chr17	31633703	31633720	protein_coding	Wdr4	exon	ENSMUSG00000024037	ProperStrand	6	chr8	13159389	13159405	protein_coding	Lamp1	exon	ENSMUSG00000031447	ProperStrand	92	1	-17.1911
chr14	33146963	33154432	protein_coding	Ogdhl	exon	ENSMUSG00000021913	ProperStrand	182	chr19	8963077	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	6	-6.5254
chr11	70366942	70366959	protein_coding	Pld2	exon	ENSMUSG00000020828	NonProperStrand	3	chr4	21606097	21606115	protein_coding	Prdm13	exon	ENSMUSG00000040478	ProperStrand	51	1	-inf
chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	chr4	116828379	116828452	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-4.9607
chr7	81864270	81864287	LINE	L2a	L2	chr7L2a81864221	NonProperStrand	1	chr3	68889175	68889207	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-inf
chr9	108411541	108412436	protein_coding	Qars	exon	ENSMUSG00000032604	ProperStrand	16	chr4	131865427	131865507	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-6.5937
chr17	35292692	35292749	protein_coding	Prrc2a	exon	ENSMUSG00000024393	ProperStrand	315	chr10	126733610	126733949	protein_coding	Mars	exon	ENSMUSG00000040354	ProperStrand	38	1	-10.9112
chr17	90825790	90825806	protein_coding	Nrxn1	intron	ENSMUSG00000024109	ProperStrand	34	chr4	131865855	131865897	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.7115
chr19	6166980	6167060	protein_coding	Batf2	intron	ENSMUSG00000039699	NonProperStrand	1	chr5	115054074	115054164	protein_coding	BC057022	intron	ENSMUSG00000041930	NonProperStrand	4	1	-inf
chr1	64726688	64726737	antisense	2810408I11Rik	.	ENSMUSG00000087213	ProperStrand	6	chr12	111891577	111891629	protein_coding	Dync1h1	intron	ENSMUSG00000018707	ProperStrand	648	5	-19.4614
chr4	3520676	3520766	protein_coding	Tgs1	exon	ENSMUSG00000028233	ProperStrand	10	chr4	131865410	131865490	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-7.5608
chr3	148622371	148622461	protein_coding	Lphn2	intron	ENSMUSG00000028184	ProperStrand	20	chr16	23111690	23111770	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.8417
chr7	4895897	4895913	protein_coding	A430110N23Rik	exon	ENSMUSG00000035279	NonProperStrand	3	chr18	35716842	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-8.1910
chr2	25103927	25103984	protein_coding	Ndor1	exon	ENSMUSG00000006471	ProperStrand	8	chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	1	-13.9694
chr11	77351170	77351201	protein_coding	Taok1	utr3	ENSMUSG00000017291	ProperStrand	41	chr18	35716762	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-9.9704
chr12	92806689	92808204	protein_coding	Gtf2a1	exon	ENSMUSG00000020962	ProperStrand	61	chr10	110918552	110918642	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-3.4184
chr5	54389947	54389965	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	chr16	19883898	19884021	protein_coding	A930003A15Rik	exon	ENSMUSG00000075330	ProperStrand	93	2	-15.6021
chr1	136870525	136870566	protein_coding	Ube2t	utr3	ENSMUSG00000026429	ProperStrand	12	chr11	51551280	51551335	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	2	-17.3133
chr2	26251290	26251336	protein_coding	Pmpca	utr3	ENSMUSG00000026926	ProperStrand	45	chr1	89673730	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	3	-9.3485
chr1	136514328	136514363	protein_coding	Kdm5b	utr5	ENSMUSG00000042207	ProperStrand	223	chr2	130101264	130101310	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-4.0494
chr3	157729109	157729125	protein_coding	Lrrc40	exon	ENSMUSG00000063052	NonProperStrand	26	chr11	6428095	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.7683
chr17	32183212	32183237	protein_coding	Rrp1b	intron	ENSMUSG00000058392	ProperStrand	38	chr16	23111437	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.9421
chr1	137052294	137052335	protein_coding	Arl8a	utr3	ENSMUSG00000026426	ProperStrand	12	chr6	114260511	114260527	protein_coding	Slc6a1	exon	ENSMUSG00000030310	NonProperStrand	147	1	-14.8008
chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	chr15	88899136	88899152	protein_coding	Panx2	exon	ENSMUSG00000058441	NonProperStrand	5	1	-12.1323
chr10	43303722	43303822	protein_coding	Cd24a	utr3	ENSMUSG00000047139	ProperStrand	4	chr4	131908753	131908794	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-6.2660
chr8	13377837	13377927	protein_coding	Tfdp1	utr3	ENSMUSG00000038482	ProperStrand	19	chr19	8800355	8800410	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-5.7475
chr7	19863671	19863688	protein_coding	Ppm1n	exon	ENSMUSG00000030402	ProperStrand	6	chr1	72758768	72760107	protein_coding	Rpl37a	exon	ENSMUSG00000046330	ProperStrand	94	1	-16.9504
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr5	23907915	23907931	protein_coding	Abcb8	exon	ENSMUSG00000028973	NonProperStrand	49	1	-8.3800
chr11	97546405	97546421	protein_coding	Mllt6	utr3	ENSMUSG00000038437	ProperStrand	110	chr4	79648821	79648882	pseudogene	Gm11407	.	ENSMUSG00000082179	ProperStrand	26	1	-13.7907
chr6	144948007	144948069	protein_coding	Bcat1	utr3	ENSMUSG00000030268	ProperStrand	49	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-5.6072
chr6	91673471	91674855	protein_coding	Slc6a6	exon	ENSMUSG00000030096	ProperStrand	206	chr12	112779190	112779218	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-2.5134
chr3	88512841	88513766	protein_coding	2810403A07Rik	exon	ENSMUSG00000028060	ProperStrand	22	chr11	6428035	6428075	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.0956
chr5	53210954	53211003	protein_coding	Zcchc4	utr3	ENSMUSG00000029179	ProperStrand	15	chr19	8798740	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-7.5588
chr14	22481631	22488647	protein_coding	Myst4	exon	ENSMUSG00000021767	ProperStrand	151	chr16	23111378	23111502	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	7	-5.2083
chr8	59542038	59542128	LINE	L1_Mm	L1	chr8L1_Mm59541899	NonProperStrand	1	chr8	49019501	49019591	protein_coding	Wwc2	intron	ENSMUSG00000031563	ProperStrand	37	1	-inf
chr18	36018433	36018523	protein_coding	Cxxc5	exon	ENSMUSG00000046668	ProperStrand	30	chr8	129468753	129468833	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-5.7624
chr12	112830962	112830978	protein_coding	Mark3	exon	ENSMUSG00000007411	NonProperStrand	22	chr15	34370620	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-5.4759
chr3	136386743	136386833	protein_coding	Ppp3ca	intron	ENSMUSG00000028161	ProperStrand	45	chr12	106269287	106269367	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	2	-7.7850
chr12	36219400	36219416	protein_coding	Ahr	utr5	ENSMUSG00000019256	NonProperStrand	64	chr11	6428121	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.0760
chr11	6428075	6428169	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr1	162968442	162968519	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	12	-0.8327
chrX	91782222	91782238	protein_coding	Maged1	exon	ENSMUSG00000025151	ProperStrand	43	chr1	9736170	9736246	protein_coding	Vcpip1	exon	ENSMUSG00000045210	ProperStrand	34	1	-15.1377
chr10	76522705	76523117	protein_coding	Col18a1	exon	ENSMUSG00000001435	ProperStrand	287	chr1	45488603	45488620	protein_coding	Col5a2	intron	ENSMUSG00000026042	ProperStrand	184	1	-7.9359
chr7	52713357	52714594	protein_coding	Ftl1	utr3	ENSMUSG00000050708	ProperStrand	807	chr16	23111705	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	11	-1.5436
chr14	119453869	119453886	protein_coding	Uggt2	exon	ENSMUSG00000042104	NonProperStrand	2	chr11	77996577	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-13.5262
chr1	10023349	10023366	protein_coding	Cops5	exon	ENSMUSG00000025917	ProperStrand	11	chr7	52382753	52382812	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-10.1964
chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	chrX	84483701	84483751	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	2	-7.8648
chr2	180444971	180445027	protein_coding	2310003C23Rik	utr5	ENSMUSG00000027573	ProperStrand	25	chr16	23111373	23111442	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.6475
chr10	4529261	4529322	protein_coding	Mtrf1l	intron	ENSMUSG00000019774	ProperStrand	1	chr9	64024954	64024998	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	1	-inf
chr16	61324512	61324602	LTR	IAPEz-int	ERVK	chr16IAPEz-int61324390	NonProperStrand	1	chr14	80261022	80261112	lincRNA	Gm6999	intron	ENSMUSG00000075495	ProperStrand	265	1	-inf
chr1	31260593	31260609	protein_coding	Lgsn	exon	ENSMUSG00000050217	ProperStrand	20	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-11.1511
chr17	79984331	79984421	LTR	ORR1A2	MaLR	chr17ORR1A279984119	NonProperStrand	1	chr4	54192186	54192266	LTR	ORR1A4	MaLR	chr4ORR1A454192155	NonProperStrand	1	1	-inf
chr12	25397583	25397778	protein_coding	Rrm2	exon	ENSMUSG00000020649	ProperStrand	65	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.2309
chr4	134900445	134900535	protein_coding	Srrm1	exon	ENSMUSG00000028809	ProperStrand	142	chr11	97642980	97643060	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.1493
chr2	120349853	120349909	protein_coding	Zfp106	exon	ENSMUSG00000027288	ProperStrand	199	chr14	56159295	56159311	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	1	-8.5384
chr7	30231512	30231592	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	chr10	80644883	80644973	protein_coding	Eef2	utr3	ENSMUSG00000034994	ProperStrand	2244	2	-3.5913
chr10	36713651	36716802	protein_coding	Hdac2	exon	ENSMUSG00000019777	ProperStrand	36	chr17	24856664	24856754	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-7.4446
chrX	90827379	90827395	protein_coding	Pola1	exon	ENSMUSG00000006678	ProperStrand	83	chr11	95820885	95820933	protein_coding	Igf2bp1	utr3	ENSMUSG00000013415	ProperStrand	140	1	-10.9599
chr2	51963236	51965931	protein_coding	Rif1	exon	ENSMUSG00000036202	ProperStrand	201	chr7	29136562	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-2.3449
chr4	129200282	129201516	protein_coding	Hdac1	exon	ENSMUSG00000028800	ProperStrand	49	chr11	69483200	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.8009
chrX	72214248	72214264	protein_coding-noncoding	Gab3	utr3	ENSMUSG00000032750	ProperStrand	420	chr16	17789308	17789384	protein_coding	Klhl22	exon	ENSMUSG00000022750	ProperStrand	22	1	-11.4472
chr4	86502719	86503270	protein_coding	Rps6	utr5	ENSMUSG00000028495	ProperStrand	263	chr1	33826682	33827623	protein_coding	Zfp451	exon	ENSMUSG00000042197	ProperStrand	17	3	-19.9847
mmu-miR-6240	2	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr14	30851615	30851631	protein_coding	Chdh	utr3	ENSMUSG00000015970	ProperStrand	50	1	-6.2632
chr6	30886771	30886790	lincRNA	4930412F09Rik	intron	ENSMUSG00000085321	ProperStrand	2	chr5	33361618	33361639	protein_coding	Ywhah	utr5	ENSMUSG00000018965	ProperStrand	81	1	-inf
chr7	134357606	134357649	protein_coding	Mylpf	exon	ENSMUSG00000030672	ProperStrand	1	chr17	35089184	35089210	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-inf
chr1	34297034	34297124	protein_coding	Dst	intron	ENSMUSG00000026131	ProperStrand	461	chr1	137281395	137281475	protein_coding	Ipo9	utr3	ENSMUSG00000041879	NonProperStrand	2	1	-16.7962
chrX	91227307	91227397	pseudogene	Gm14790	.	ENSMUSG00000083114	NonProperStrand	4	chr7	116664842	116664922	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-7.9535
chr5	37186622	37186712	protein_coding	Mrfap1	utr3	ENSMUSG00000055302	ProperStrand	62	chr10	110918549	110918629	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-3.3886
chr14	78893461	78902803	protein_coding	Akap11	utr3	ENSMUSG00000022016	ProperStrand	44	chr11	69483136	69483192	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-5.1862
chr6	125113359	125115291	protein_coding	Gapdh	exon	ENSMUSG00000057666	ProperStrand	356	chr11	62418049	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-2.2741
chr6	5434153	5434170	protein_coding	Pdk4	utr3	ENSMUSG00000019577	ProperStrand	2	chrX	71517837	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-13.9887
mmu-miR-6240	4	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr2	158205270	158205405	snoRNA	ENSMUSG00000064585_SNORA71	.	ENSMUSG00000064585	ProperStrand	418	3	-6.1360
chr14	26478171	26478188	protein_coding	Zmiz1	intron	ENSMUSG00000007817	ProperStrand	34	chr18	33954816	33954874	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-4.5779
chrX	148325602	148325644	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	chr15	102314608	102314641	protein_coding	Pcbp2	exon	ENSMUSG00000056851	ProperStrand	164	1	-7.0608
chr11	5180669	5180685	protein_coding	Znrf3	utr3	ENSMUSG00000041961	NonProperStrand	210	chr4	116826698	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-4.3445
chr2	93638483	93646214	protein_coding	Ext2	exon	ENSMUSG00000027198	ProperStrand	49	chr2	174156209	174156226	protein_coding	AL593857.1	intron	ENSMUSG00000090625	ProperStrand	13	1	-16.8515
chr9	20918701	20918717	protein_coding	Tyk2	exon	ENSMUSG00000032175	ProperStrand	29	chr19	8963062	8963087	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.5658
chr10	75359822	75360194	protein_coding	Smarcb1	exon	ENSMUSG00000000902	ProperStrand	109	chr1	34359771	34359828	protein_coding	Dst	exon	ENSMUSG00000026131	ProperStrand	461	1	-8.0367
chr9	40101787	40101878	protein_coding	Gramd1b	utr3	ENSMUSG00000040111	ProperStrand	40	chr2	26493413	26493493	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-4.5101
chr4	141172152	141172204	protein_coding	Tmem82	exon	ENSMUSG00000043085	ProperStrand	1	chr5	121655016	121655051	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-inf
chr2	167296977	167297067	protein_coding	Slc9a8	exon	ENSMUSG00000039463	ProperStrand	26	chr10	23505541	23505621	protein_coding	Rps12	intron	ENSMUSG00000061983	ProperStrand	309	1	-11.7200
chr4	73979734	73980464	protein_coding	Kdm4c	exon	ENSMUSG00000028397	ProperStrand	36	chr11	69483136	69483208	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	8	-inf
chr19	6070738	6070756	protein_coding	1110014N23Rik	exon	ENSMUSG00000024797	ProperStrand	49	chr9	108839122	108839151	protein_coding	Uqcrc1	exon	ENSMUSG00000025651	ProperStrand	43	1	-14.4016
chr2	158439746	158439763	protein_coding	Slc32a1	exon	ENSMUSG00000037771	NonProperStrand	3	chr11	97011283	97011315	protein_coding	Tbkbp1	utr5	ENSMUSG00000038517	ProperStrand	10	1	-inf
chr6	87795522	87795731	protein_coding	Cnbp	exon	ENSMUSG00000030057	ProperStrand	46	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-5.7313
chr2	113938992	113939051	protein_coding	Aqr	exon	ENSMUSG00000040383	ProperStrand	70	chr11	98878344	98878370	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	2	-9.7274
chr2	4829164	4829180	protein_coding	Sephs1	utr3	ENSMUSG00000026662	NonProperStrand	271	chr9	64022854	64022899	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-5.0572
chr11	104217024	104217055	protein_coding	1700081L11Rik	intron	ENSMUSG00000018412	ProperStrand	73	chr7	117189995	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.9788
chr3	41419088	41419160	protein_coding	Phf17	utr3	ENSMUSG00000025764	ProperStrand	101	chr4	116875170	116875249	snRNA	ENSMUSG00000070228_U5	.	ENSMUSG00000070228	ProperStrand	131	3	-21.1986
chr8	96497209	96497997	protein_coding	Amfr	exon	ENSMUSG00000031751	ProperStrand	26	chr4	131865381	131865471	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	4	-17.3471
chr5	31846150	31846250	protein_coding	Slc4a1ap	exon	ENSMUSG00000029141	ProperStrand	9	chr8	129468745	129468780	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-8.2158
mmu-miR-5100	5	20	miRNA	mmu-miR-5100	.	mmu-miR-5100	ProperStrand	132	chr18	33954841	33954941	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-2.1273
chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	chr6	71832579	71832646	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-1.7054
chr17	35278937	35279261	protein_coding	Bag6	exon	ENSMUSG00000024392	ProperStrand	181	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-5.5601
chr2	180445442	180445492	protein_coding	2310003C23Rik	intron	ENSMUSG00000027573	ProperStrand	25	chr1	88247742	88247799	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-6.8271
chr18	34474069	34474734	protein_coding	Apc	exon	ENSMUSG00000005871	ProperStrand	64	chr16	23111436	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-2.2756
chr4	56910496	56910618	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	chr7	118219573	118219638	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	10	-2.3130
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr7	13516123	13516199	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	2	-5.6509
chr19	7108653	7108678	protein_coding	Stip1	exon	ENSMUSG00000024966	ProperStrand	100	chr15	5068442	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-5.0695
chr7	52309977	52309993	protein_coding	Prrg2	exon	ENSMUSG00000007837	NonProperStrand	281	chr7	117189877	117189979	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-1.8137
chr5	21262695	21262821	protein_coding	Pmpcb	exon	ENSMUSG00000029017	ProperStrand	16	chr14	65372816	65372889	snoRNA	ENSMUSG00000064442_SNORA36	.	ENSMUSG00000064442	ProperStrand	296	3	-19.7361
chr17	85482653	85489599	protein_coding	Prepl	utr5	ENSMUSG00000024127	ProperStrand	106	chr11	69483141	69483237	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.5405
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr18	22965958	22965975	protein_coding	Nol4	intron	ENSMUSG00000041923	ProperStrand	17	1	-6.9523
chr2	164796661	164796679	protein_coding	Slc12a5	intron	ENSMUSG00000017740	NonProperStrand	40	chr7	52162305	52163161	protein_coding	Ap2a1	exon	ENSMUSG00000060279	ProperStrand	193	1	-11.7882
chr2	51656846	51656926	LTR	ORR1B1	MaLR	chr2ORR1B151656745	ProperStrand	1	chr5	143639659	143639749	lincRNA	D430018E03Rik	exon	ENSMUSG00000013989	ProperStrand	1	1	-inf
chr17	4082124	4082151	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr17	47943489	47943507	LTR	MLT1J	MaLR	chr17MLT1J47943258	ProperStrand	8	1	-14.0985
chr7	54110602	54110681	protein_coding	Ldha	utr3	ENSMUSG00000063229	ProperStrand	280	chr9	15119996	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-4.2519
chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	chr10	87613487	87613533	protein_coding	Nup37	intron	ENSMUSG00000035351	ProperStrand	11	1	-12.5276
chr6	86704951	86707830	protein_coding	Anxa4	exon	ENSMUSG00000029994	ProperStrand	47	chr7	116663649	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	4	-10.2610
chr4	133695092	133695145	protein_coding-noncoding	Ccdc21	utr3	ENSMUSG00000037443	ProperStrand	5	chr11	6250646	6252141	protein_coding	Ogdh	exon	ENSMUSG00000020456	ProperStrand	42	1	-18.2513
chr15	103024600	103024699	protein_coding	Cbx5	utr3	ENSMUSG00000009575	ProperStrand	98	chr11	77320752	77320789	protein_coding	Git1	utr3	ENSMUSG00000011877	ProperStrand	95	14	-18.9430
chr9	108651088	108651173	protein_coding	Prkar2a	utr3	ENSMUSG00000032601	ProperStrand	43	chr3	68889072	68889138	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-3.8727
chr7	108521620	108521676	protein_coding	Arap1	exon	ENSMUSG00000032812	ProperStrand	23	chr9	25314728	25314746	protein_coding	Eepd1	intron	ENSMUSG00000036611	ProperStrand	6	1	-18.5851
chr11	101488851	101488879	protein_coding	Rdm1	intron	ENSMUSG00000010362	ProperStrand	28	chr2	144087324	144087376	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-8.0698
chr5	143667121	143667305	protein_coding	Actb	exon	ENSMUSG00000029580	ProperStrand	446	chr8	13416896	13416912	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	3	-6.9210
chr4	53517749	53517766	protein_coding	Slc44a1	intron	ENSMUSG00000028412	NonProperStrand	8	chr5	74489594	74489631	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-7.7916
chr11	115648842	115649606	protein_coding	2310067B10Rik	exon	ENSMUSG00000020747	ProperStrand	74	chr11	69481353	69481433	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-2.8261
chr9	40610516	40610552	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-2.1432
chr7	54107472	54107562	protein_coding	Ldha	intron	ENSMUSG00000063229	ProperStrand	280	chr4	56910551	56910629	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-3.1782
chr3	94874806	94874857	protein_coding	Pip5k1a	exon	ENSMUSG00000028126	ProperStrand	47	chr9	15120988	15121088	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	1	-10.1987
chr9	120039622	120039682	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	chrX	113862541	113862570	snoRNA	ENSMUSG00000088518_SNORA9	.	ENSMUSG00000088518	ProperStrand	280	1	-0.9014
chr1	145641902	145643938	protein_coding	Uchl5	exon	ENSMUSG00000018189	ProperStrand	15	chr9	15119631	15119721	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.2385
chr6	128322002	128322018	protein_coding	Foxm1	exon	ENSMUSG00000001517	NonProperStrand	66	chr6	124665406	124665506	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	1	-6.7448
chr10	75399037	75399093	protein_coding	Chchd10	exon	ENSMUSG00000049422	ProperStrand	140	chr8	98269967	98270000	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	2	-6.5873
chr11	60012694	60012821	protein_coding	Srebf1	utr3	ENSMUSG00000020538	ProperStrand	24	chr1	162965579	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.0142
chr5	130712775	130712823	protein_coding	0610007L01Rik	exon	ENSMUSG00000053094	ProperStrand	39	chr15	79908929	79908983	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-6.3212
chr16	30315080	30315108	protein_coding	Atp13a3	utr3	ENSMUSG00000022533	ProperStrand	45	chr7	152050422	152050459	protein_coding	Fgf4	utr3	ENSMUSG00000050917	ProperStrand	66	1	-13.7034
chr11	95911130	95911149	protein_coding	Ube2z	utr3	ENSMUSG00000014349	ProperStrand	41	chr18	33954844	33954934	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-4.2190
chr7	31645099	31645116	Low_complexity	C-rich	Low_complexity	chr7C-rich31645067	NonProperStrand	1	chr2	32563527	32563545	protein_coding	Cdk9	exon	ENSMUSG00000009555	NonProperStrand	49	1	-inf
chr2	181450622	181451208	protein_coding	Oprl1	exon	ENSMUSG00000027584	ProperStrand	32	chr1	162965534	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.4550
chr13	62944660	62944677	protein_coding	Fbp2	intron	ENSMUSG00000021456	ProperStrand	100	chr8	73999016	73999086	protein_coding	Dda1	utr3	ENSMUSG00000074247	ProperStrand	11	1	-15.7554
chr18	63109676	63109692	protein_coding	Apcdd1	exon	ENSMUSG00000071847	NonProperStrand	254	chr1	88247800	88247835	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-2.4413
chr5	74060969	74062363	protein_coding	Spata18	exon	ENSMUSG00000029155	NonProperStrand	2	chr3	123210882	123210972	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-inf
chr1	193821435	193821452	protein_coding	Traf5	exon	ENSMUSG00000026637	ProperStrand	13	chr16	23110482	23110538	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.3353
chr7	31895791	31899711	protein_coding	Hpn	utr5	ENSMUSG00000001249	ProperStrand	126	chr16	16323855	16324068	protein_coding	Dnm1l	exon	ENSMUSG00000022789	NonProperStrand	38	1	-12.7458
chr2	70341491	70341508	antisense	Gm16292	.	ENSMUSG00000086515	ProperStrand	11	chr11	85651938	85651954	protein_coding	Tbx2	exon	ENSMUSG00000000093	NonProperStrand	14	1	-inf
chr8	108483297	108483313	protein_coding	Slc12a4	exon	ENSMUSG00000017765	ProperStrand	25	chr5	65213196	65213253	protein_coding	Klf3	exon	ENSMUSG00000029178	ProperStrand	56	1	-15.2198
chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	chr6	125136423	125136461	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	1	-2.8263
chr13	110231347	110231365	protein_coding	Pde4d	intron	ENSMUSG00000021699	ProperStrand	92	chr19	8799581	8799621	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-5.9232
chr17	28467842	28467865	protein_coding	Rpl10a	exon	ENSMUSG00000037805	ProperStrand	121	chr17	71998966	71998994	protein_coding	Wdr43	intron	ENSMUSG00000041057	ProperStrand	70	1	-11.5947
chr12	111932336	111932401	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr11	62416951	62416990	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-1.4968
chr13	14087430	14087448	protein_coding	B3galnt2	exon	ENSMUSG00000039242	NonProperStrand	4	chr17	24857814	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-7.6570
chr13	9833563	9833652	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr1	72871392	72871431	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	1	-1.5756
chr18	19438409	19438433	LINE	L1Md_F2	L1	chr18L1Md_F219432441	NonProperStrand	1	chr2	32526937	32527760	protein_coding	Eng	exon	ENSMUSG00000026814	ProperStrand	29	1	-inf
chr1	132742959	132742975	protein_coding	Pigr	exon	ENSMUSG00000026417	NonProperStrand	48	chr10	90581034	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	4	-16.2125
chr8	108603149	108603223	protein_coding	Nfatc3	exon	ENSMUSG00000031902	ProperStrand	75	chr10	79476395	79476411	protein_coding	Abca7	exon	ENSMUSG00000035722	NonProperStrand	2	1	-inf
chr14	30432374	30432390	protein_coding	Cacna2d3	intron	ENSMUSG00000021991	ProperStrand	21	chr1	162965531	162965588	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.2774
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr15	101926383	101926483	protein_coding	Eif4b	utr3	ENSMUSG00000058655	ProperStrand	484	7	-11.4977
chr15	12739364	12739380	protein_coding	6030458C11Rik	utr3	ENSMUSG00000022195	NonProperStrand	1	chr16	23110454	23110512	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-inf
chr2	47996257	47996274	lincRNA	Gm13481	intron	ENSMUSG00000086353	ProperStrand	9	chr2	26493408	26493475	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-7.5048
chr4	131908357	131908472	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr4	122968671	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-0.9800
chr9	120038030	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	chr14	52829489	52829570	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	2	-1.2837
chr5	4046764	4046855	protein_coding	Akap9	exon	ENSMUSG00000040407	ProperStrand	28	chr5	90679482	90679505	protein_coding	Ankrd17	exon	ENSMUSG00000055204	ProperStrand	77	1	-14.3554
chr14	20621743	20622322	protein_coding	Nid2	exon	ENSMUSG00000021806	ProperStrand	372	chr2	26493413	26493493	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-0.8398
chr2	27806248	27806856	protein_coding	Col5a1	exon	ENSMUSG00000026837	ProperStrand	35	chr12	112779232	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	3	-13.5236
chr11	119136228	119136244	protein_coding	Gaa	exon	ENSMUSG00000025579	NonProperStrand	201	chr15	76429279	76429305	protein_coding	Cpsf1	exon	ENSMUSG00000034022	ProperStrand	127	1	-9.3845
chr16	38089975	38089992	protein_coding	Gsk3b	utr5	ENSMUSG00000022812	ProperStrand	80	chr1	183853750	183853766	protein_coding	Enah	exon	ENSMUSG00000022995	NonProperStrand	33	1	-13.9372
chr15	4042460	4042478	protein_coding	Oxct1	exon	ENSMUSG00000022186	ProperStrand	48	chr16	23111447	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.5796
chr15	88692620	88692720	protein_coding	Pim3	utr5	ENSMUSG00000035828	ProperStrand	66	chr11	69483136	69483185	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	4	-8.4548
chr5	100467584	100467642	protein_coding	Hnrpdl	intron	ENSMUSG00000029328	ProperStrand	39	chr17	24857803	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.0467
chr12	111891594	111891630	protein_coding	Dync1h1	intron	ENSMUSG00000018707	ProperStrand	648	chr13	90238599	90238719	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	1	-3.9955
chr8	86188069	86188090	protein_coding	Gipc1	exon	ENSMUSG00000019433	ProperStrand	60	chr1	182733328	182740323	protein_coding	H3f3a	exon	ENSMUSG00000060743	ProperStrand	46	1	-13.8520
chr2	26493436	26493516	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr8	110104662	110104752	protein_coding	Psmd7	utr3	ENSMUSG00000039067	ProperStrand	36	1	-7.2101
chr15	80781697	80781787	protein_coding	Adsl	intron	ENSMUSG00000022407	NonProperStrand	2	chr12	77883944	77884034	protein_coding	Churc1	utr3	ENSMUSG00000090258	ProperStrand	3	1	-inf
chr17	29129412	29136973	protein_coding	Stk38	exon	ENSMUSG00000024006	ProperStrand	57	chr4	131865891	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.8480
mmu-miR-1949	0	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr14	31827477	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	3	-5.7366
chr3	99003137	99003159	protein_coding	Wars2	intron	ENSMUSG00000004233	NonProperStrand	48	chr11	98878375	98878465	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-6.7268
chr17	35822057	35822257	protein_coding	Ddr1	exon	ENSMUSG00000003534	ProperStrand	129	chr5	9121099	9121159	protein_coding	Dmtf1	exon	ENSMUSG00000042508	ProperStrand	6	1	-16.4904
chr13	55800805	55800935	protein_coding	B230219D22Rik	exon	ENSMUSG00000045767	ProperStrand	19	chr16	23110556	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.5826
chr1	75484537	75484553	protein_coding	Obsl1	exon	ENSMUSG00000026211	NonProperStrand	192	chr9	58110087	58110145	protein_coding	Stoml1	utr3	ENSMUSG00000032333	ProperStrand	9	1	-14.8766
chr11	117677002	117677102	protein_coding	Tk1	utr3	ENSMUSG00000025574	ProperStrand	6	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-6.8330
chr10	110212994	110213094	protein_coding	E2f7	intron	ENSMUSG00000020185	ProperStrand	30	chr18	35714218	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	12	-21.0940
chr7	117189865	117189930	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr3	108228259	108228275	protein_coding	Sars	utr3	ENSMUSG00000068739	NonProperStrand	200	1	-3.8899
chr4	140121137	140121153	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	chr12	112779210	112779284	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	2	-5.5525
chr11	69793768	69793785	protein_coding	Rai12	utr5	ENSMUSG00000018565	ProperStrand	2	chr1	162965980	162965999	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-10.9191
chr5	108998847	108998866	protein_coding	Gak	utr3	ENSMUSG00000062234	ProperStrand	33	chr4	131865866	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-7.2281
chr2	27391461	27391561	protein_coding	Wdr5	utr3	ENSMUSG00000026917	ProperStrand	81	chr19	8963103	8963166	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.7905
chr13	104827381	104827442	protein_coding	Nln	exon	ENSMUSG00000021710	ProperStrand	47	chr7	118219574	118219614	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-7.7029
chr4	128428943	128428990	protein_coding	Phc2	utr3	ENSMUSG00000028796	ProperStrand	14	chr16	23110926	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-8.6732
chr2	157119950	157120991	protein_coding	Rpn2	exon	ENSMUSG00000027642	ProperStrand	363	chr12	113883062	113883125	protein_coding	Siva1	utr5	ENSMUSG00000064326	ProperStrand	7	1	-14.1357
chr5	151546758	151546820	protein_coding	Pds5b	exon	ENSMUSG00000034021	ProperStrand	21	chr14	33005115	33005182	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-6.0364
chr8	73115775	73115791	protein_coding	Ell	utr3	ENSMUSG00000070002	NonProperStrand	134	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.9011
chr8	126463050	126464940	protein_coding	Nup133	exon	ENSMUSG00000039509	ProperStrand	59	chr7	118219574	118219621	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-4.2023
chr14	66928024	66928043	protein_coding	Trim35	exon	ENSMUSG00000022043	ProperStrand	6	chr11	106935966	106936092	protein_coding	Bptf	exon	ENSMUSG00000040481	ProperStrand	70	1	-17.6381
chr15	25711331	25711408	protein_coding	Myo10	exon	ENSMUSG00000022272	ProperStrand	168	chr9	120037980	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	5	-12.5355
chr15	73411208	73411273	protein_coding	Slc45a4	utr3	ENSMUSG00000079020	ProperStrand	127	chr8	73419657	73419724	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-5.1834
chr17	24483975	24483995	protein_coding	Abca17	intron	ENSMUSG00000035435	ProperStrand	2	chr11	6428131	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-10.4671
chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	2	-6.5643
chr1	162965533	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	NonProperStrand	10	chr7	116663691	116663746	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	NonProperStrand	51	1	-17.4450
chr8	81584448	81584505	protein_coding	Zfp827	exon	ENSMUSG00000071064	ProperStrand	78	chr19	12086454	12086495	tRNA	tRNA109-ValTAC	.	10802	ProperStrand	96	1	-11.8416
chr15	79362330	79366435	protein_coding	Ddx17	exon	ENSMUSG00000055065	ProperStrand	140	chr2	91436228	91436301	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-5.8231
chr3	68889023	68889049	protein_coding	Kpna4	intron	ENSMUSG00000027782	ProperStrand	21	chr3	68889051	68889136	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	4	-16.4822
chr11	62416575	62418038	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr4	131908232	131908395	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	8	-0.8228
chr12	112779158	112779222	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	chr2	130103454	130103502	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	2	-1.2253
chr11	5866397	5866487	protein_coding	Ykt6	utr3	ENSMUSG00000002741	ProperStrand	46	chr15	98350168	98350248	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	2	-8.6728
chr7	25327013	25327103	protein_coding	2310033E01Rik	intron	ENSMUSG00000011632	NonProperStrand	1	chr6	129413005	129413087	protein_coding	Clec7a	utr3	ENSMUSG00000079293	ProperStrand	1	1	-inf
chr17	46381984	46382084	protein_coding	Polr1c	exon	ENSMUSG00000067148	ProperStrand	58	chr18	35716834	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.2257
chr11	116205331	116205427	protein_coding	Rnf157	intron	ENSMUSG00000052949	ProperStrand	32	chr16	23110943	23110962	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.9664
chr11	106114310	106115080	protein_coding	Ftsj3	exon	ENSMUSG00000020706	ProperStrand	64	chr16	23111739	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	6	-11.6555
chr5	109124122	109132306	protein_coding	Fgfrl1	exon	ENSMUSG00000008090	ProperStrand	111	chr4	154933056	154933123	protein_coding	Gnb1	utr3	ENSMUSG00000029064	ProperStrand	69	1	-11.7966
chr8	125021716	125021775	protein_coding	Fam38a	exon	ENSMUSG00000014444	ProperStrand	132	chr3	95980322	95980410	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	3	-12.3864
chr19	11015616	11015632	protein_coding	Gpr44	exon	ENSMUSG00000034117	NonProperStrand	118	chr3	88715213	88715230	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-5.8980
chr14	73624444	73624461	protein_coding	Rb1	intron	ENSMUSG00000022105	ProperStrand	67	chr10	23505603	23505627	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-7.3301
chr18	58313447	58313524	protein_coding	Fbn2	utr5	ENSMUSG00000024598	ProperStrand	16	chr11	97631139	97631175	tRNA	tRNA1444-CysGCA	.	526750	ProperStrand	91	2	-19.8870
chr12	111891514	111891604	protein_coding	Dync1h1	intron	ENSMUSG00000018707	ProperStrand	648	chr6	71832629	71832687	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-1.3904
chr5	140857296	140857313	protein_coding	Snx8	intron	ENSMUSG00000029560	ProperStrand	106	chr4	131908410	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.7009
chr8	13192093	13192127	protein_coding	Grtp1	exon	ENSMUSG00000038515	ProperStrand	10	chr1	162966819	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-9.8957
chr2	25288669	25288843	protein_coding	Abca2	exon	ENSMUSG00000026944	ProperStrand	57	chr7	118219595	118219675	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-4.2678
chr10	127025501	127025519	protein_coding	Lrp1	exon	ENSMUSG00000040249	NonProperStrand	24	chr5	108336377	108336429	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-6.6878
chr4	151851217	151851234	protein_coding	Nphp4	intron	ENSMUSG00000039577	ProperStrand	33	chr4	130305550	130305603	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	1	-11.1159
chr2	86138158	86138174	protein_coding	Olfr1052	exon	ENSMUSG00000047149	NonProperStrand	119	chr1	162968442	162968470	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-4.7465
chr8	72813255	72813345	protein_coding-noncoding	Homer3	utr5	ENSMUSG00000003573	NonProperStrand	1	chr8	72813375	72813466	protein_coding	Homer3	intron	ENSMUSG00000003573	NonProperStrand	4	1	-inf
chr15	102136744	102141084	protein_coding	Espl1	exon	ENSMUSG00000058290	ProperStrand	172	chr4	131865859	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.0230
chr4	131908365	131908895	lincRNA	Gm17300	exon	ENSMUSG00000091021	ProperStrand	109	chr10	23505152	23505201	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	NonProperStrand	45	2	-19.0332
chr13	9171352	9171368	protein_coding	Larp4b	utr3	ENSMUSG00000033499	NonProperStrand	5	chr4	131908819	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-9.7750
chr18	22803022	22803112	LINE	Lx7	L1	chr18Lx722802982	NonProperStrand	1	chr18	22802869	22802959	LTR	RLTR13C1	ERVK	chr18RLTR13C122802010	NonProperStrand	1	1	-inf
chr2	130109497	130109513	protein_coding	Idh3b	exon	ENSMUSG00000027406	ProperStrand	146	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	2	-11.4863
chr7	128883907	128883924	protein_coding	Scnn1g	exon	ENSMUSG00000000216	NonProperStrand	6	chr11	6007784	6007838	protein_coding	Nudcd3	utr3	ENSMUSG00000053838	ProperStrand	26	1	-18.7113
chr9	106595098	106595179	protein_coding	Rad54l2	exon	ENSMUSG00000040661	ProperStrand	51	chr17	23798806	23798822	protein_coding	Ccdc64b	exon	ENSMUSG00000043782	ProperStrand	9	1	-17.5457
chr7	13516174	13516203	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr1	181027187	181027205	protein_coding	Smyd3	intron	ENSMUSG00000055067	ProperStrand	231	2	-9.7330
chr7	117189957	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	chr19	8799581	8799644	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	11	-2.2720
chr5	125934905	125934960	protein_coding	Bri3bp	exon	ENSMUSG00000037905	ProperStrand	43	chr5	121655017	121655107	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.3767
chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	chr11	62416599	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-1.6754
chrX	161375078	161375094	protein_coding	Mospd2	utr3	ENSMUSG00000061778	ProperStrand	5	chr7	52381722	52381758	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-12.7285
chr5	129526051	129526068	protein_coding	Ran	utr5	ENSMUSG00000029430	ProperStrand	82	chr7	116663634	116663712	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.9926
chr16	4767423	4767513	protein_coding	5730403B10Rik	utr3	ENSMUSG00000004071	ProperStrand	5	chr2	153593994	153594074	protein_coding	Mapre1	utr3	ENSMUSG00000027479	ProperStrand	19	1	-19.2987
chr7	13871968	13874027	protein_coding	Lig1	exon	ENSMUSG00000056394	ProperStrand	89	chr4	131908810	131908900	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.7386
chr6	131338474	131338494	Simple_repeat	(CGGG)n	Simple_repeat	chr6(CGGG)n131338476	NonProperStrand	1	chr18	10029944	10029960	protein_coding	Usp14	utr5	ENSMUSG00000047879	NonProperStrand	4	1	-inf
chr1	90123798	90124639	protein_coding	Heatr7b1	utr5	ENSMUSG00000079429	ProperStrand	147	chr10	110918563	110918624	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-1.9047
chr1	66521957	66521973	protein_coding	Unc80	intron	ENSMUSG00000055567	NonProperStrand	212	chr2	26494708	26494759	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.1010
chr2	90235296	90235326	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr18	34997336	34997436	protein_coding	Kdm3b	utr3	ENSMUSG00000038773	ProperStrand	80	1	-3.9184
chr8	96703185	96703732	protein_coding	Mt1	utr5	ENSMUSG00000031765	ProperStrand	92	chr18	60634913	60634929	protein_coding	2010002N04Rik	utr3	ENSMUSG00000038059	ProperStrand	1	1	-inf
chr18	73693107	73693139	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr11	101466224	101466351	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	6	-10.4074
chr2	132078782	132078812	protein_coding	Pcna	utr5	ENSMUSG00000027342	ProperStrand	25	chr19	8800377	8800467	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-5.2030
chr4	131866159	131866249	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	chr1	162967734	162967806	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	1	-1.1530
chr9	72596561	72596578	protein_coding	Nedd4	utr3	ENSMUSG00000032216	ProperStrand	308	chr10	110918549	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	4	-4.1956
chr15	100358955	100358972	protein_coding	Tfcp2	exon	ENSMUSG00000009733	NonProperStrand	77	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-5.3797
chr14	56164180	56166541	protein_coding	Pck2	exon	ENSMUSG00000040618	ProperStrand	18	chr17	24857717	24857797	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.5014
chr13	112540780	112541440	protein_coding	Map3k1	exon	ENSMUSG00000021754	ProperStrand	113	chrX	84483698	84483717	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-6.9886
mmu-miR-2137	1	20	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	chr11	77996560	77996623	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-4.3953
chr2	118457557	118458158	protein_coding	Bub1b	exon	ENSMUSG00000040084	ProperStrand	45	chr9	120038554	120038634	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.5633
chr13	19684241	19684260	protein_coding	Epdr1	utr3	ENSMUSG00000002808	ProperStrand	46	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-8.7120
chr15	27676413	27676446	protein_coding	Trio	intron	ENSMUSG00000022263	ProperStrand	108	chr5	130295419	130295509	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	2	-6.9013
chr17	87316802	87316818	protein_coding	1700090G07Rik	utr5	ENSMUSG00000037689	ProperStrand	7	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-10.2562
chr14	24248354	24248373	protein_coding	Kcnma1	intron	ENSMUSG00000063142	ProperStrand	26	chr16	23110939	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.2392
chr7	3581337	3581353	protein_coding	Tfpt	utr5	ENSMUSG00000006335	ProperStrand	19	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.7782
chr10	61759472	61761907	protein_coding	Hk1	exon	ENSMUSG00000037012	ProperStrand	84	chr10	23505152	23505203	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-1.6576
chr2	147011593	147011610	protein_coding	Nkx2-2	exon	ENSMUSG00000027434	ProperStrand	47	chr9	21602970	21602986	protein_coding	Kank2	utr5	ENSMUSG00000032194	ProperStrand	196	1	-11.4315
chr19	53940113	53940143	protein_coding	Rbm20	utr3	ENSMUSG00000043639	ProperStrand	25	chr9	120037914	120038004	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	2	-10.4389
chr8	96697296	96697386	protein_coding	Mt2	utr3	ENSMUSG00000031762	ProperStrand	71	chr4	131865395	131865475	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-3.6876
chr13	13581380	13581422	protein_coding	Nid1	exon	ENSMUSG00000005397	ProperStrand	112	chr1	88247738	88247796	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	3	-9.5280
chr6	87864549	87864599	protein_coding	8430410A17Rik	exon	ENSMUSG00000030060	ProperStrand	22	chr16	23111447	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.8747
chr9	40612898	40612921	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	chr2	26493363	26493499	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-0.7748
chr1	72898773	72898863	protein_coding	Igfbp2	utr3	ENSMUSG00000039323	ProperStrand	406	chr10	107800720	107800800	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	1	-4.3289
chr9	40611228	40611931	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr8	32260335	32260424	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	2	-1.1594
chr11	98862676	98862731	protein_coding	Top2a	exon	ENSMUSG00000020914	ProperStrand	324	chr9	120038564	120038654	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	3	-2.1050
chr4	131826047	131826127	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	chr2	144087323	144087413	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-2.6816
chr19	8906931	8906988	protein_coding	Hnrnpul2	utr3	ENSMUSG00000071659	ProperStrand	93	chr4	131865860	131865950	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.1370
chr8	26927728	26927759	protein_coding	Ash2l	utr3	ENSMUSG00000031575	ProperStrand	113	chr15	34370544	34370634	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	3	-6.4222
chr16	94354693	94354773	protein_coding	Hlcs	exon	ENSMUSG00000040820	ProperStrand	22	chr11	69481386	69481476	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.1045
chr16	57391589	57391677	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr3	94167314	94167330	protein_coding	C2cd4d	utr5	ENSMUSG00000091648	NonProperStrand	5	2	-20.2441
chr15	83770046	83770063	protein_coding	Efcab6	intron	ENSMUSG00000022441	ProperStrand	60	chr4	134893978	134896450	protein_coding	Srrm1	exon	ENSMUSG00000028809	ProperStrand	142	1	-11.5844
chr10	79441526	79441617	protein_coding	ORF61	exon	ENSMUSG00000013858	ProperStrand	71	chr8	93624002	93624053	protein_coding	Rbl2	exon	ENSMUSG00000031666	ProperStrand	7	1	-17.4563
chr2	157563267	157600193	protein_coding	Ctnnbl1	exon	ENSMUSG00000027649	ProperStrand	26	chr5	140814016	140814032	protein_coding	Nudt1	utr3	ENSMUSG00000036639	NonProperStrand	2	2	-inf
chr17	32453268	32453285	protein_coding	Akap8	exon	ENSMUSG00000024045	ProperStrand	339	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	2	-5.6003
chr5	101260408	101260432	snoRNA	ENSMUSG00000077354_SNORA42	.	ENSMUSG00000077354	ProperStrand	22	chr16	23110911	23111001	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.4786
chr11	50194987	50195035	protein_coding	Hnrnph1	exon	ENSMUSG00000007850	ProperStrand	49	chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	2	-16.1794
chr7	107987421	107987494	protein_coding	Fam168a	utr3	ENSMUSG00000029461	ProperStrand	14	chr16	23111460	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.7143
chr3	87718493	87718511	protein_coding	Hdgf	exon	ENSMUSG00000004897	ProperStrand	117	chr2	31924012	31924028	protein_coding	Fam78a	utr3	ENSMUSG00000050592	NonProperStrand	340	1	-8.5006
chr12	58691976	58691992	antisense	4921518K17Rik	.	ENSMUSG00000085851	ProperStrand	75	chr18	66151315	66152734	protein_coding	Lman1	exon	ENSMUSG00000041891	ProperStrand	36	1	-13.8983
chr15	98604924	98606960	protein_coding	Wnt10b	exon	ENSMUSG00000022996	NonProperStrand	189	chr15	102147103	102147159	protein_coding	Espl1	exon	ENSMUSG00000058290	ProperStrand	172	1	-8.9016
chrX	148309121	148354256	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	chr7	52381719	52381763	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	4	-11.5346
chr11	69482659	69482691	protein_coding	Eif4a1	exon	ENSMUSG00000059796	ProperStrand	108	chr4	56910538	56910628	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	5	-19.3839
chr15	88560338	88560354	protein_coding	Brd1	exon	ENSMUSG00000022387	NonProperStrand	7	chr2	26494782	26494825	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-7.3461
chr5	115692454	115710298	protein_coding	Rnf10	exon	ENSMUSG00000041740	ProperStrand	95	chr4	131908692	131908794	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-1.4066
chr7	117189863	117189944	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr2	158204061	158204094	snoRNA	ENSMUSG00000065840_SNORA71	.	ENSMUSG00000065840	ProperStrand	107	1	-5.0788
chr9	106364997	106365579	protein_coding	Pcbp4	exon	ENSMUSG00000023495	ProperStrand	36	chr17	6232006	6232022	protein_coding	Tulp4	exon	ENSMUSG00000034377	NonProperStrand	265	1	-11.3663
chr15	7416361	7416377	LINE	L1MB2	L1	chr15L1MB27415569	ProperStrand	2	chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	1	-16.1826
chr5	147892191	147892226	protein_coding	Polr1d	intron	ENSMUSG00000029642	ProperStrand	23	chr4	131865867	131865957	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-5.8764
chr8	72287172	72287188	protein_coding	Zfp866	utr3	ENSMUSG00000043090	NonProperStrand	134	chr10	23506278	23506315	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-5.3677
chr2	103572393	103572411	protein_coding	Nat10	exon	ENSMUSG00000027185	ProperStrand	124	chr4	140111976	140111996	protein_coding	Arhgef10l	intron	ENSMUSG00000040964	ProperStrand	15	1	-14.6898
chr11	5344505	5344521	protein_coding	Znrf3	exon	ENSMUSG00000041961	ProperStrand	63	chr11	55296278	55296332	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-6.0838
chr8	124408977	124431218	protein_coding	Slc7a5	exon	ENSMUSG00000040010	ProperStrand	166	chr4	131908236	131908346	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	9	-8.0375
chr17	34324656	34324673	protein_coding	Psmb9	utr5	ENSMUSG00000024337	ProperStrand	60	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-11.6852
chr1	18204299	18204315	pseudogene	Defb44-ps	.	ENSMUSG00000070977	ProperStrand	37	chr17	24857717	24857770	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.1418
chr11	115128415	115128432	protein_coding	Grin2c	utr5	ENSMUSG00000020734	ProperStrand	12	chr19	8798484	8798553	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-8.4427
chr9	53037238	53037292	protein_coding	Ddx10	exon	ENSMUSG00000053289	ProperStrand	40	chr10	23505152	23505206	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-5.1854
chr17	88203081	88203171	LINE	L1_Mus4	L1	chr17L1_Mus488202370	ProperStrand	1	chrX	72469215	72469295	protein_coding	F8	intron	ENSMUSG00000031196	NonProperStrand	3	1	-inf
chr5	37682760	37682778	protein_coding	Crmp1	utr3	ENSMUSG00000029121	ProperStrand	85	chr8	73419657	73419729	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.5178
chr8	38049667	38049683	LTR	MLT1A0	MaLR	chr8MLT1A038049422	NonProperStrand	91	chr11	75307516	75307669	protein_coding	Prpf8	exon	ENSMUSG00000020850	ProperStrand	255	1	-9.5765
chr11	109793377	109793398	LINE	Lx2A1	L1	chr11Lx2A1109793132	ProperStrand	2	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-8.7800
chr1	34247370	34352355	protein_coding	Dst	exon	ENSMUSG00000026131	ProperStrand	461	chr16	23111371	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	14	-4.0218
chr7	116674908	116674926	protein_coding	St5	intron	ENSMUSG00000031024	ProperStrand	42	chr1	63225588	63225642	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-7.3784
chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	chr17	27236036	27236052	protein_coding	Itpr3	exon	ENSMUSG00000042644	ProperStrand	137	1	-7.9289
chr14	66710244	66710334	protein_coding	Ephx2	intron	ENSMUSG00000022040	ProperStrand	6	chr1	136212046	136212126	protein_coding	Ppfia4	intron	ENSMUSG00000026458	ProperStrand	45	1	-18.1260
chr19	38886885	38886953	protein_coding	Noc3l	exon	ENSMUSG00000024999	ProperStrand	11	chr4	86223062	86223100	protein_coding	Rraga	utr3	ENSMUSG00000070934	ProperStrand	13	3	-20.3588
chr9	78326309	78329467	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr1	162968212	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	8	-10.0743
chr7	20222919	20222977	protein_coding	Clptm1	exon	ENSMUSG00000002981	ProperStrand	109	chr4	130305552	130305620	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	7	-19.1249
chr9	100966289	100966307	SINE	B4A	B4	chr9B4A100966214	ProperStrand	51	chr5	136707644	136707662	protein_coding	Sh2b2	exon	ENSMUSG00000005057	NonProperStrand	101	1	-12.5960
chr1	87747061	87747169	protein_coding	Cab39	utr3	ENSMUSG00000036707	ProperStrand	45	chr16	23110986	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-2.1851
chr11	109316528	109316614	protein_coding	Slc16a6	exon	ENSMUSG00000041920	ProperStrand	15	chr11	62418015	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	4	-19.5960
chr1	15428902	15428919	protein_coding	Kcnb2	intron	ENSMUSG00000092083	NonProperStrand	10	chr8	73419712	73419775	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-6.6208
chr6	136797036	136797052	protein_coding	Art4	utr3	ENSMUSG00000030217	NonProperStrand	5	chr11	116938557	116938621	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-11.2944
chr19	38298503	38298562	protein_coding	5730455O13Rik	utr5	ENSMUSG00000054237	ProperStrand	4	chr18	35931495	35931531	protein_coding	Ube2d2	utr5	ENSMUSG00000091896	ProperStrand	20	3	-19.7541
chr19	5797857	5797936	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	mmu-miR-7081-3p	0	22	miRNA	mmu-miR-7081-3p	.	mmu-miR-7081-3p	NonProperStrand	3	3	-inf
chr8	73282707	73282751	protein_coding	Mpv17l2	utr3	ENSMUSG00000035559	ProperStrand	14	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	5	-inf
chr4	116883504	116883564	snRNA	ENSMUSG00000070237_U5	.	ENSMUSG00000070237	ProperStrand	154	chr16	23111373	23111475	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	14	-15.9554
chr13	12488861	12499871	protein_coding	Heatr1	exon	ENSMUSG00000050244	ProperStrand	74	chr4	131908357	131908440	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-5.0803
chr2	102926980	102926997	protein_coding	Apip	intron	ENSMUSG00000010911	NonProperStrand	26	chr12	110884370	110884410	snoRNA	ENSMUSG00000084691_SNORD113	.	ENSMUSG00000084691	ProperStrand	23	1	-16.8114
chr8	109183568	109183658	protein_coding	Cdh1	exon	ENSMUSG00000000303	ProperStrand	283	chr4	122968597	122968677	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-3.3190
chr18	78018711	78018860	protein_coding	Atp5a1	exon	ENSMUSG00000025428	ProperStrand	254	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-5.3122
chr18	61715439	61716157	protein_coding	Csnk1a1	exon	ENSMUSG00000024576	ProperStrand	64	chr3	52800042	52802196	protein_coding	Cog6	exon	ENSMUSG00000027742	ProperStrand	5	1	-18.0636
chr9	48923653	48923670	protein_coding	Tmprss5	exon	ENSMUSG00000032268	NonProperStrand	4	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.0048
chr13	38593005	38593022	protein_coding	Txndc5	utr3	ENSMUSG00000038991	ProperStrand	48	chr3	88684288	88684388	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-7.6795
chr9	59526810	59526901	protein_coding	Pkm2	utr3	ENSMUSG00000032294	ProperStrand	1296	chr16	37887484	37887528	protein_coding	Lrrc58	utr3	ENSMUSG00000034158	ProperStrand	23	1	-9.1075
chr6	45965480	46120177	protein_coding	Cntnap2	exon	ENSMUSG00000039419	NonProperStrand	283	chr10	126532147	126532163	protein_coding	Os9	utr3	ENSMUSG00000040462	NonProperStrand	28	1	-11.7450
chr19	32767810	32767885	protein_coding	Atad1	intron	ENSMUSG00000013662	ProperStrand	14	chr8	73115775	73115791	protein_coding	Ell	utr3	ENSMUSG00000070002	NonProperStrand	134	1	-14.6769
chr11	60370927	60370943	protein_coding	Alkbh5	utr3	ENSMUSG00000042650	ProperStrand	203	chr1	63225677	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-4.2998
chr15	98377313	98379140	protein_coding	Ccnt1	exon	ENSMUSG00000011960	ProperStrand	14	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.2008
chr11	68715124	68717925	protein_coding	Rpl26	exon	ENSMUSG00000060938	ProperStrand	130	chr4	131865856	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.5180
chr11	115912114	115914340	protein_coding	Unk	exon	ENSMUSG00000020770	ProperStrand	21	chr1	162965572	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.2774
chr3	96073841	96074112	protein_coding	Hist2h2bb	intron	ENSMUSG00000050936	ProperStrand	57	chr7	29136525	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	5	-11.5222
chr7	104056738	104056754	antisense	Gm15415	.	ENSMUSG00000087304	ProperStrand	8	chr9	120039567	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-11.9036
chr8	107775606	107775696	protein_coding	D230025D16Rik	utr3	ENSMUSG00000031889	ProperStrand	20	chr19	9042759	9042839	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	1	-11.6907
chr16	4039189	4039206	protein_coding	Dnase1	exon	ENSMUSG00000005980	NonProperStrand	17	chr4	131865855	131865910	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.9909
chr16	38240987	38241033	protein_coding	Gsk3b	utr3	ENSMUSG00000022812	ProperStrand	80	chr15	5068407	5068480	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	4	-16.8327
chr2	11393483	11393583	protein_coding	Pfkfb3	utr3	ENSMUSG00000026773	ProperStrand	27	chr9	15118334	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	13	-inf
mmu-miR-3968	0	21	miRNA	mmu-miR-3968	.	mmu-miR-3968	ProperStrand	27	chr17	24857731	24857835	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.7240
chr4	115512162	115512178	protein_coding	Mknk1	intron	ENSMUSG00000028708	ProperStrand	4	chr16	23110841	23110890	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.6489
chr11	11701158	11701204	protein_coding	Fignl1	exon	ENSMUSG00000035455	ProperStrand	10	chrX	34622906	34622930	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-6.6656
chr15	103036007	103036048	protein_coding	Cbx5	exon	ENSMUSG00000009575	ProperStrand	98	chr4	122968678	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	4	-16.3274
chr1	136484610	136485379	protein_coding	Kdm5b	utr5	ENSMUSG00000042207	ProperStrand	223	chr18	35102297	35102334	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-4.0484
chr4	151767987	151768067	protein_coding	Kcnab2	intron	ENSMUSG00000028931	ProperStrand	22	chr5	148778375	148778465	protein_coding	Mtus2	intron	ENSMUSG00000029651	ProperStrand	114	1	-14.0607
chr2	11602046	11603567	protein_coding	Il2ra	exon	ENSMUSG00000026770	ProperStrand	17	chr19	8963026	8963084	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.5881
chr7	13880897	13881660	protein_coding	Lig1	exon	ENSMUSG00000056394	ProperStrand	89	chr11	69483165	69483245	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.8056
chr8	94098002	94098070	protein_coding	Fto	intron	ENSMUSG00000055932	ProperStrand	34	chr2	152239613	152239703	protein_coding	Zcchc3	exon	ENSMUSG00000074682	ProperStrand	11	1	-17.6624
chr3	99001525	99001561	protein_coding	Wars2	intron	ENSMUSG00000004233	NonProperStrand	48	chr1	162967489	162967515	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-3.8891
chr11	120601928	120602018	SINE	B4A	B4	chr11B4A120601937	NonProperStrand	1	chr11	120602074	120602164	SINE	RSINE1	B4	chr11RSINE1120602091	NonProperStrand	1	1	-inf
chr17	56552613	56552669	protein_coding	Ptprs	utr3	ENSMUSG00000013236	ProperStrand	152	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-0.9814
chr7	13516163	13516213	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr11	97642952	97643036	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	8	-2.7717
chr12	113010708	113010769	protein_coding	Klc1	exon	ENSMUSG00000021288	ProperStrand	35	chr2	26493395	26493485	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	3	-11.3725
chr6	50273046	50273084	protein_coding	Osbpl3	exon	ENSMUSG00000029822	ProperStrand	34	chr16	23110454	23110538	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-8.7153
chr5	30590862	30590897	protein_coding	Ept1	exon	ENSMUSG00000075703	ProperStrand	18	chr4	131908688	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.1942
chr9	110544350	110544366	protein_coding	Nbeal2	exon	ENSMUSG00000056724	ProperStrand	161	chr3	68889342	68889369	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-1.6025
chr8	27091218	27091234	protein_coding	4930444A02Rik	utr3	ENSMUSG00000037251	NonProperStrand	57	chr1	162967517	162967537	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-3.5689
chr2	26493390	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr19	21466852	21466868	protein_coding	Gda	utr3	ENSMUSG00000058624	ProperStrand	2	1	-13.6349
chr7	52249082	52249140	protein_coding	Bcl2l12	intron	ENSMUSG00000003190	ProperStrand	4	chr7	116664872	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-13.2234
chr6	28430483	28430525	protein_coding	Snd1	utr5	ENSMUSG00000001424	ProperStrand	210	chr11	45723144	45723160	protein_coding	Clint1	utr3	ENSMUSG00000006169	NonProperStrand	273	1	-7.7726
chr11	78128760	78128780	protein_coding	Spag5	exon	ENSMUSG00000002055	ProperStrand	49	chr9	21823257	21823273	protein_coding	Elavl3	exon	ENSMUSG00000003410	NonProperStrand	137	1	-12.0643
chr12	31569601	31569618	protein_coding	Fam150b	utr5	ENSMUSG00000054204	ProperStrand	12	chr11	101304056	101304815	protein_coding	Rpl27	exon	ENSMUSG00000063316	ProperStrand	96	1	-15.6517
chr11	3649570	3649587	protein_coding	Osbp2	intron	ENSMUSG00000020435	ProperStrand	60	chr2	127284913	127284930	protein_coding	Kcnip3	intron	ENSMUSG00000079056	ProperStrand	14	1	-16.2941
chr13	54202172	54202229	protein_coding	Sfxn1	utr3	ENSMUSG00000021474	ProperStrand	18	chr10	110918555	110918645	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-5.7690
chr19	44188379	44188459	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr17	43013105	43013195	protein_coding	Cd2ap	intron	ENSMUSG00000061665	ProperStrand	44	1	-8.4165
chr17	6107150	6107166	protein_coding	Tulp4	intron	ENSMUSG00000034377	ProperStrand	164	chr5	121655029	121655063	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-1.9889
chr8	59971762	59971842	lincRNA	2500002B13Rik	intron	ENSMUSG00000086276	ProperStrand	46	chr2	91436245	91436335	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-8.0286
chr7	96888454	96934939	protein_coding	Me3	exon	ENSMUSG00000030621	NonProperStrand	8	chr19	8963086	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-10.1244
chr10	61803921	61803943	antisense	2210417K05Rik	.	ENSMUSG00000085347	ProperStrand	1	chr17	28217020	28217037	protein_coding	Tcp11	exon	ENSMUSG00000062859	ProperStrand	3	1	-inf
chr5	128734172	128734189	protein_coding	Tmem132d	intron	ENSMUSG00000034310	NonProperStrand	22	chr1	168239525	168239541	protein_coding	Ildr2	exon	ENSMUSG00000040612	ProperStrand	103	1	-14.2684
chr1	152270735	152270753	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	chr8	126465026	126468201	protein_coding	Nup133	exon	ENSMUSG00000039509	ProperStrand	59	1	-8.9419
chr5	137507526	137507542	protein_coding	Vgf	exon	ENSMUSG00000037428	NonProperStrand	13	chr13	38599809	38602007	protein_coding	Txndc5	exon	ENSMUSG00000038991	ProperStrand	48	1	-16.8861
chr5	99987915	99987931	protein_coding	A930011G23Rik	exon	ENSMUSG00000089809	NonProperStrand	43	chr2	144087414	144087463	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-7.2082
chr9	30868628	30868721	protein_coding	Zbtb44	intron	ENSMUSG00000047412	ProperStrand	68	chr18	73693113	73693137	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-5.2799
chr10	126741257	126741343	protein_coding	Mars	exon	ENSMUSG00000040354	ProperStrand	38	chr9	15119364	15119428	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-6.0042
chr2	170353767	170353784	LTR	MTE2b	MaLR	chr2MTE2b170353540	NonProperStrand	1	chr7	117189931	117190006	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-inf
chr2	143000730	143000810	LTR	MTC	MaLR	chr2MTC143000706	ProperStrand	1	chr2	143000619	143000709	SINE	B2_Mm1t	B2	chr2B2_Mm1t143000554	ProperStrand	1	1	-inf
chr3	9608909	9609009	protein_coding	Zfp704	intron	ENSMUSG00000040209	NonProperStrand	8	chr8	73419657	73419706	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-7.0879
chr4	91012544	91012564	protein_coding	Elavl2	intron	ENSMUSG00000008489	ProperStrand	52	chr10	23506308	23506348	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-7.2323
chr8	73032318	73033438	protein_coding	2810422J05Rik	exon	ENSMUSG00000055553	ProperStrand	171	chr19	8963026	8963179	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	12	-18.6074
chr4	134900475	134900543	protein_coding	Srrm1	exon	ENSMUSG00000028809	ProperStrand	142	chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	2	-12.2739
chr6	125412188	125412347	protein_coding	Cd9	exon	ENSMUSG00000030342	ProperStrand	81	chr4	131908236	131908298	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.0135
chr18	53047279	53047296	protein_coding	Sncaip	intron	ENSMUSG00000024534	NonProperStrand	16	chr9	15118322	15118357	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-6.0250
chr8	37713950	37713968	protein_coding	Dlc1	intron	ENSMUSG00000031523	NonProperStrand	19	chr5	121655017	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.9783
chr5	107303155	107303171	protein_coding	Hfm1	intron	ENSMUSG00000043410	ProperStrand	23	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	2	-17.0824
chr6	122678963	122679007	protein_coding	Slc2a3	utr3	ENSMUSG00000003153	ProperStrand	682	chr19	25484358	25484374	protein_coding	Kank1	exon	ENSMUSG00000032702	ProperStrand	218	1	-5.8952
chr9	48148720	48148737	protein_coding	Fam55b	utr5	ENSMUSG00000032028	ProperStrand	25	chr7	117189863	117189944	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	2	-12.7455
chr8	86095689	86095779	protein_coding	Tecr	utr3	ENSMUSG00000031708	ProperStrand	100	chr9	120039577	120039657	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.4187
chr9	40612852	40612921	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	chr9	120037934	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	10	-18.9545
chr2	150781421	150784356	protein_coding	Ninl	exon	ENSMUSG00000068115	ProperStrand	51	chr13	46765144	46765160	protein_coding	C78339	exon	ENSMUSG00000069237	NonProperStrand	104	1	-12.5376
chr8	23121759	23121780	protein_coding	Atp7b	intron	ENSMUSG00000006567	ProperStrand	7	chr9	120039558	120039658	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-7.5792
chr11	77505580	77505677	protein_coding	Nufip2	exon	ENSMUSG00000037857	ProperStrand	36	chr12	110887830	110887893	snoRNA	ENSMUSG00000084549_SNORD113	.	ENSMUSG00000084549	ProperStrand	196	1	-11.9710
chrX	76869118	76869208	protein_coding	Mageb16	exon	ENSMUSG00000046942	ProperStrand	4	chr5	92485087	92485167	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	1	-14.4181
chr11	87418325	87418513	protein_coding	Mtmr4	exon	ENSMUSG00000018401	ProperStrand	14	chr5	130300460	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-12.5332
chr1	36125990	36160362	protein_coding	Hs6st1	exon	ENSMUSG00000045216	ProperStrand	63	chr3	68889028	68889121	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-3.1685
chr15	98373646	98373680	protein_coding	Ccnt1	exon	ENSMUSG00000011960	ProperStrand	14	chr2	26493364	26493401	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-6.5906
chr1	88423345	88423435	protein_coding	Ptma	utr5	ENSMUSG00000026238	ProperStrand	385	chr15	98350157	98350237	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-1.5050
chr9	57809132	57809149	protein_coding	Sema7a	exon	ENSMUSG00000038264	ProperStrand	43	chr18	35102314	35102350	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-7.2529
chr10	127020511	127020887	protein_coding	Lrp1	exon	ENSMUSG00000040249	NonProperStrand	24	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	2	-15.2023
chr17	39979942	39980012	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr9	21200504	21200526	protein_coding	Ilf3	exon	ENSMUSG00000032178	ProperStrand	164	1	-5.2462
chr10	79707811	79707827	SINE	B2_Mm1t	B2	chr10B2_Mm1t79707814	NonProperStrand	14	chr8	24367268	24367498	protein_coding	Golga7	utr5	ENSMUSG00000015341	ProperStrand	36	1	-17.3791
chr12	70462381	70462471	misc_RNA	AC157822.1	.	ENSMUSG00000092773	ProperStrand	18	chr19	8800389	8800479	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-5.8558
chr7	48785346	48785366	LINE	L1Md_F2	L1	chr7L1Md_F248785314	NonProperStrand	5	chr4	131908689	131908784	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-inf
chr15	81534810	81534831	protein_coding	Rangap1	utr3	ENSMUSG00000022391	ProperStrand	69	chr3	40755217	40755233	protein_coding	Larp1b	intron	ENSMUSG00000037814	ProperStrand	29	1	-14.5100
chr9	81949791	81949813	protein_coding	Mei4	intron	ENSMUSG00000043289	NonProperStrand	42	chr4	131908804	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.7439
chr13	95856366	95856384	protein_coding	Pde8b	intron	ENSMUSG00000021684	ProperStrand	43	chr15	79908930	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	2	-9.9625
chr8	108188064	108188143	protein_coding	Ctcf	exon	ENSMUSG00000005698	ProperStrand	75	chr11	53229198	53229257	protein_coding	Aff4	utr3	ENSMUSG00000049470	ProperStrand	94	27	-18.8499
chr6	87863892	87863910	lincRNA	Gm16723	intron	ENSMUSG00000085703	ProperStrand	13	chr14	33005141	33005231	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-7.0085
chr7	13609984	13610033	protein_coding	Trim28	utr5	ENSMUSG00000005566	ProperStrand	296	chr16	23110538	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-0.8444
chr10	80641713	80641755	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	chr13	49779667	49779756	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-1.6979
chr12	112118482	112118535	protein_coding	Cinp	intron	ENSMUSG00000021276	NonProperStrand	4	chr7	146082761	146082833	protein_coding	Bnip3	utr3	ENSMUSG00000078566	ProperStrand	20	4	-inf
chr11	106362554	106362692	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	chr16	23110827	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	78	-11.3988
chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	chr1	162967486	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-3.7116
chr18	34759757	34759808	protein_coding	Brd8	utr3	ENSMUSG00000003778	ProperStrand	27	chr11	118900007	118900023	protein_coding	Cbx8	exon	ENSMUSG00000025578	ProperStrand	95	1	-14.0075
chr7	125315349	125315439	protein_coding	Smg1	exon	ENSMUSG00000030655	ProperStrand	70	chr4	56910510	56910590	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-5.8037
chr3	156224612	156224628	lincRNA	4930570G19Rik	exon	ENSMUSG00000085084	ProperStrand	326	chr11	106362556	106362635	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-4.1097
chr8	46648732	46648748	protein_coding	Sorbs2	intron	ENSMUSG00000031626	ProperStrand	50	chr9	120039533	120039622	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.6542
chr17	13115704	13115784	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	chr14	52829462	52829552	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-2.6648
chr18	44555634	44555651	protein_coding	Dcp2	exon	ENSMUSG00000024472	ProperStrand	44	chr1	162966000	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	3	-10.1558
chr9	61771858	61771886	protein_coding	Kif23	exon	ENSMUSG00000032254	ProperStrand	41	chr7	29136525	29136632	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.0293
chr9	107646658	107646676	protein_coding	Rbm5	exon	ENSMUSG00000032580	ProperStrand	19	chr11	97643006	97643079	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.5938
chr19	47340682	47340709	protein_coding	Sh3pxd2a	utr3	ENSMUSG00000053617	ProperStrand	57	chr4	131908689	131908714	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.2943
chr19	44188433	44188513	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr12	78038922	78039012	protein_coding	Max	utr3	ENSMUSG00000059436	ProperStrand	7	1	-12.2125
chr9	108467062	108467260	protein_coding	Impdh2	exon	ENSMUSG00000062867	ProperStrand	74	chr7	117189904	117189953	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.9546
chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	chr6	124665490	124665521	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	1	-3.9962
chr8	108583529	108583629	protein_coding	Nfatc3	utr5	ENSMUSG00000031902	ProperStrand	75	chr1	162967514	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	6	-16.5747
chr6	85572684	85628542	protein_coding	Alms1	exon	ENSMUSG00000063810	ProperStrand	37	chr16	23110831	23110996	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.6429
chr13	97266647	97266664	protein_coding	Polk	exon	ENSMUSG00000021668	NonProperStrand	25	chr13	54783976	54784035	protein_coding	Rnf44	exon	ENSMUSG00000034928	ProperStrand	90	1	-14.2744
chr12	114290175	114290191	protein_coding	Pacs2	intron	ENSMUSG00000021143	NonProperStrand	302	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-1.6074
chr2	168580659	168580719	protein_coding	Sall4	exon	ENSMUSG00000027547	ProperStrand	82	chr17	28942265	28942284	protein_coding	Brpf3	intron	ENSMUSG00000063952	NonProperStrand	2	1	-20.6649
chr12	88791594	88791783	protein_coding	Snw1	exon	ENSMUSG00000021039	ProperStrand	36	chr16	23111464	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.0295
chr18	34605234	34607696	protein_coding	Fam13b	exon	ENSMUSG00000036501	ProperStrand	30	chr4	131908689	131908788	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	6	-13.9564
chr11	40580162	40580182	LINE	L1M3	L1	chr11L1M340580022	ProperStrand	4	chr15	75445678	75448539	protein_coding	Zfp41	utr5	ENSMUSG00000047003	ProperStrand	9	1	-19.8837
chr8	86782815	86784198	protein_coding	Ccdc130	exon	ENSMUSG00000004994	ProperStrand	29	chr7	19590197	19590213	protein_coding	Irf2bp1	exon	ENSMUSG00000044030	NonProperStrand	81	1	-14.1816
chr10	77516756	77517757	protein_coding	Dnmt3l	exon	ENSMUSG00000000730	ProperStrand	37	chr2	26493390	26493474	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-4.6603
chr1	71660350	71660430	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr5	24805752	24805842	protein_coding	Mll3	exon	ENSMUSG00000038056	ProperStrand	31	1	-9.1606
chr10	98726554	98726570	protein_coding	Dusp6	exon	ENSMUSG00000019960	ProperStrand	116	chr19	8798740	8798776	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-3.5571
chr10	80809668	80809684	protein_coding	Hmg20b	exon	ENSMUSG00000020232	ProperStrand	157	chr5	108334195	108334257	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-3.0270
chr16	85802546	85802564	protein_coding	Adamts1	exon	ENSMUSG00000022893	ProperStrand	102	chr7	148634709	148634836	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	4	-10.3721
chr9	15118245	15118322	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	chr4	116828379	116828451	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	6	-3.0682
chr8	114244009	114244094	protein_coding	Bcar1	intron	ENSMUSG00000031955	ProperStrand	44	chr16	23111372	23111462	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.7117
chr18	10052130	10052153	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr10	90581034	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-1.0014
chr4	145264347	145264437	lincRNA	Gm17609	intron	ENSMUSG00000090398	ProperStrand	1	chr4	146349619	146349709	lincRNA	Gm17452	intron	ENSMUSG00000092143	ProperStrand	1	1	-inf
chr16	8698640	8698874	protein_coding	Usp7	exon	ENSMUSG00000022710	ProperStrand	118	chr1	161270526	161270555	snoRNA	ENSMUSG00000089536_Scarna3a	.	ENSMUSG00000089536	ProperStrand	247	1	-9.1202
chr11	106852743	106852785	protein_coding	Kpna2	exon	ENSMUSG00000018362	ProperStrand	70	chr1	40053934	40053951	protein_coding	Map4k4	exon	ENSMUSG00000026074	ProperStrand	348	2	-14.9809
chr12	87821270	87821297	protein_coding	Esrrb	intron	ENSMUSG00000021255	ProperStrand	254	chr4	131866208	131866283	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-1.2696
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr5	130295497	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	2	-1.4240
chr8	72334599	72334615	protein_coding	Gmip	exon	ENSMUSG00000036246	ProperStrand	102	chr1	162966189	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-6.5230
chr7	52680334	52680523	protein_coding	Ruvbl2	exon	ENSMUSG00000003868	ProperStrand	41	chr4	141597821	141597889	protein_coding	Tmem51	intron	ENSMUSG00000040616	ProperStrand	30	9	-inf
chr11	70465970	70465991	protein_coding	Pfn1	intron	ENSMUSG00000018293	ProperStrand	55	chr3	68889026	68889136	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	12	-19.0845
chr3	95978372	95978393	protein_coding	Sf3b4	exon	ENSMUSG00000068856	ProperStrand	40	chr7	118219574	118219621	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-8.1819
chr9	21041672	21041762	protein_coding	Keap1	exon	ENSMUSG00000003308	ProperStrand	9	chr10	77432749	77432770	protein_coding	Trpm2	intron	ENSMUSG00000009292	NonProperStrand	23	4	-19.1740
chr9	79915104	79915120	protein_coding	Senp6	utr5	ENSMUSG00000034252	ProperStrand	110	chr2	130102055	130102102	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-4.1922
chr2	84528349	84528436	protein_coding	Zdhhc5	utr3	ENSMUSG00000034075	ProperStrand	20	chr18	35716816	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.1514
chr6	70805487	70805574	snoRNA	ENSMUSG00000065750_SNORA5	.	ENSMUSG00000065750	ProperStrand	165	chr17	24857818	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-0.8348
chrX	133552370	133552391	protein_coding	Mcart6	intron	ENSMUSG00000044348	ProperStrand	6	chr11	68886963	68887007	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	2	-14.2538
chr14	35507129	35537918	protein_coding	Wapal	exon	ENSMUSG00000041408	ProperStrand	93	chr7	116664802	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-3.3404
chr2	32633508	32633529	protein_coding	Ptrh1	intron	ENSMUSG00000053746	ProperStrand	8	chr7	116664794	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-6.4335
chr15	83410969	83411014	protein_coding	Ttll12	exon	ENSMUSG00000016757	ProperStrand	36	chr11	97642952	97643059	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.3797
chr1	155287307	155287355	snoRNA	ENSMUSG00000064435_SNORA4	.	ENSMUSG00000064435	ProperStrand	263	chr11	77994819	77994864	snoRNA	ENSMUSG00000064540_Snord42a	.	ENSMUSG00000064540	ProperStrand	142	1	-8.6255
chr9	21542341	21553292	protein_coding	Ldlr	utr3	ENSMUSG00000032193	ProperStrand	60	chr4	131865856	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-3.2523
chr11	29643427	29643443	protein_coding	Rtn4	utr3	ENSMUSG00000020458	ProperStrand	117	chr4	133164555	133164607	protein_coding	Zdhhc18	utr3	ENSMUSG00000037553	ProperStrand	51	1	-12.2999
chr12	81268812	81268902	protein_coding	Actn1	utr3	ENSMUSG00000015143	ProperStrand	128	chr7	29136571	29136651	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.2033
chr6	84909661	84909713	protein_coding	Exoc6b	intron	ENSMUSG00000033769	ProperStrand	23	chr1	72898845	72898880	protein_coding	Igfbp2	utr3	ENSMUSG00000039323	ProperStrand	406	1	-11.4238
chr4	43541673	43541763	SINE	B4A	B4	chr4B4A43541682	ProperStrand	1	chr4	43541830	43541910	SINE	B4A	B4	chr4B4A43541826	ProperStrand	1	1	-inf
chr5	35448325	35448342	protein_coding	Lrpap1	utr5	ENSMUSG00000029103	ProperStrand	43	chr17	35089181	35089228	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-6.1404
chr11	120092201	120092291	lincRNA	2900052L18Rik	exon	ENSMUSG00000043993	ProperStrand	2	chr7	116664811	116664891	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-inf
chr4	42993699	42997297	protein_coding	Vcp	exon	ENSMUSG00000028452	ProperStrand	108	chr4	131865391	131865512	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	4	-10.1385
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr12	105938651	105940627	protein_coding	Dicer1	exon	ENSMUSG00000041415	ProperStrand	61	5	-19.3951
chr17	29042963	29042980	antisense	1700030A11Rik	.	ENSMUSG00000085333	ProperStrand	17	chr8	32260396	32260425	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-7.1260
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	85961925	85961941	protein_coding	Scoc	utr5	ENSMUSG00000063253	ProperStrand	23	1	-6.3423
chr8	13416894	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr11	67167096	67167112	protein_coding	Myh13	exon	ENSMUSG00000060180	ProperStrand	145	1	-4.7335
chr7	150422771	150422787	protein_coding	Kcnq1	intron	ENSMUSG00000009545	ProperStrand	59	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.3030
chr16	3979840	3979856	protein_coding	Slx4	exon	ENSMUSG00000039738	ProperStrand	18	chr7	116664815	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-11.5299
chr1	162967512	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	NonProperStrand	5	chr3	68889084	68889146	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	NonProperStrand	26	1	-19.2794
chr16	90768475	90768514	protein_coding	Urb1	exon	ENSMUSG00000039929	ProperStrand	71	chr1	162967541	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-3.1678
chr8	112666485	112666567	protein_coding	Calb2	utr3	ENSMUSG00000003657	ProperStrand	55	chr9	48148720	48148737	protein_coding	Fam55b	utr5	ENSMUSG00000032028	ProperStrand	25	3	-18.9953
chr6	87505641	87505731	SINE	RSINE1	B4	chr6RSINE187505621	ProperStrand	1	chr7	5361085	5361165	protein_coding	Vmn1r58	utr3	ENSMUSG00000078808	NonProperStrand	4	1	-inf
chr10	75359822	75360194	protein_coding	Smarcb1	exon	ENSMUSG00000000902	ProperStrand	109	chr1	88252835	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-5.4669
chr13	23647511	23647574	protein_coding	Hist1h1d	exon	ENSMUSG00000052565	ProperStrand	78	chr2	63936036	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	2	-11.7705
chr4	124614807	124614824	lincRNA	9930104L06Rik	intron	ENSMUSG00000044730	ProperStrand	15	chr4	131908356	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-6.4894
chr6	85895881	85895897	protein_coding	Dusp11	utr3	ENSMUSG00000030002	ProperStrand	37	chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-7.4170
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr4	154500680	154500696	protein_coding	Morn1	intron	ENSMUSG00000029049	NonProperStrand	22	1	-15.1949
chr9	54759442	54759462	protein_coding	Ireb2	utr3	ENSMUSG00000032293	ProperStrand	45	chr4	131865855	131865966	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.2312
chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	chr9	120039532	120039623	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-0.9317
chr15	4022453	4022470	protein_coding	Oxct1	intron	ENSMUSG00000022186	NonProperStrand	4	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.0048
chr1	71676274	71676374	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr10	82286740	82286757	protein_coding	1700028I16Rik	utr3	ENSMUSG00000056821	ProperStrand	18	1	-10.2680
chr11	98231332	98231418	protein_coding	Stard3	intron	ENSMUSG00000018167	ProperStrand	4	chr17	26360446	26360536	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	1	-15.7013
chr14	120115940	120115969	protein_coding	Hs6st3	intron	ENSMUSG00000053465	ProperStrand	15	chr8	34802343	34802416	snoRNA	ENSMUSG00000088856_SNORA48	.	ENSMUSG00000088856	ProperStrand	236	1	-13.3878
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr8	106942360	106942376	protein_coding	Dync1li2	utr3	ENSMUSG00000035770	ProperStrand	75	1	-7.3504
chr18	57400307	57400324	protein_coding	Megf10	exon	ENSMUSG00000024593	ProperStrand	143	chr11	116704532	116704548	protein_coding	Jmjd6	utr5	ENSMUSG00000056962	ProperStrand	92	1	-10.7110
chr17	35972467	35972520	protein_coding	Tubb5	exon	ENSMUSG00000001525	ProperStrand	624	chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	1	-3.4404
chr5	20628095	20628175	DNA	Tigger5	MER2_type	chr5Tigger520628077	NonProperStrand	1	chr5	20628233	20628323	DNA	Tigger5	MER2_type	chr5Tigger520628186	NonProperStrand	1	1	-inf
chr9	108839116	108839145	protein_coding	Uqcrc1	exon	ENSMUSG00000025651	ProperStrand	43	chr1	185857228	185857244	protein_coding	1700056E22Rik	exon	ENSMUSG00000044854	ProperStrand	173	1	-11.8614
chr6	86389238	86389277	protein_coding	C87436	utr5	ENSMUSG00000046679	ProperStrand	18	chr11	97643004	97643094	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	5	-19.1988
chr15	78022069	78022086	protein_coding	Pvalb	utr3	ENSMUSG00000005716	NonProperStrand	5	chr16	43886792	43886873	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	1	-13.2327
chr1	27835994	27836074	LINE	Lx2	L1	chr1Lx227835907	NonProperStrand	1	chr4	16490027	16490117	LINE	Lx2	L1	chr4Lx216489082	NonProperStrand	1	1	-inf
chr12	110925010	110925030	snoRNA	ENSMUSG00000064726_SNORD113	.	ENSMUSG00000064726	ProperStrand	42	chr5	108336394	108336506	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-5.5759
chr1	108620942	108620958	protein_coding	Kdsr	utr3	ENSMUSG00000009905	ProperStrand	17	chr5	89663839	89663855	protein_coding	Slc4a4	exon	ENSMUSG00000060961	NonProperStrand	195	1	-13.5157
chr2	26493364	26493386	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr5	122910110	122910165	protein_coding	Atp2a2	exon	ENSMUSG00000029467	ProperStrand	166	2	-7.0546
chr9	58071095	58071155	protein_coding	Pml	intron	ENSMUSG00000036986	ProperStrand	45	chr5	111121108	111121198	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	2	-11.2848
chr10	80543789	80543925	protein_coding	Thop1	exon	ENSMUSG00000004929	ProperStrand	20	chr16	23110899	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-6.8326
chr11	64801546	64801626	protein_coding	Elac2	exon	ENSMUSG00000020549	ProperStrand	12	chr8	73419657	73419747	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-6.2451
chr2	127953343	127953361	protein_coding-noncoding	Bcl2l11	utr5	ENSMUSG00000027381	NonProperStrand	17	chr4	131908236	131908302	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-12.2081
chr2	29794765	29794845	protein_coding-noncoding	Gle1	utr5	ENSMUSG00000019715	NonProperStrand	1	chr2	29794501	29794591	protein_coding	Gle1	intron	ENSMUSG00000019715	NonProperStrand	2	1	-inf
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	112782969	112782985	protein_coding	Arfip2	utr3	ENSMUSG00000030881	ProperStrand	191	1	-2.3635
chr4	149718235	149718261	protein_coding	Rere	intron	ENSMUSG00000039852	ProperStrand	76	chr18	35716778	35716878	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.7907
chr5	117638117	117638135	protein_coding	Taok3	intron	ENSMUSG00000061288	NonProperStrand	13	chr9	15119287	15119350	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-8.1710
chrX	71557018	71557082	protein_coding	Gdi1	utr3	ENSMUSG00000015291	ProperStrand	24	chrX	34622906	34622948	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	3	-11.7029
chr1	171622600	171622617	protein_coding	Rgs5	utr3	ENSMUSG00000026678	ProperStrand	6	chr16	23111389	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-18.0209
chr2	121949511	121949528	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	chr2	165886323	165886416	protein_coding	Ncoa3	exon	ENSMUSG00000027678	ProperStrand	58	2	-16.3219
chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr16	18240811	18240911	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	2	-1.0634
chr10	84501876	84501893	LTR	ORR1E	MaLR	chr10ORR1E84501725	NonProperStrand	1	chr16	23111372	23111467	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-inf
chr8	13416892	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr10	17547610	17547626	protein_coding	Txlnb	exon	ENSMUSG00000039891	ProperStrand	70	1	-6.1499
chr19	5800299	5800363	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr1	162967737	162967806	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	1	-4.5512
chr9	71476615	71476636	protein_coding	Cgnl1	utr3	ENSMUSG00000032232	ProperStrand	46	chr10	23505151	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.6154
chr5	124237225	124237289	protein_coding	Kntc1	intron	ENSMUSG00000029414	ProperStrand	27	chr9	15119722	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.0899
chr11	107346888	107347026	protein_coding	Psmd12	exon	ENSMUSG00000020720	ProperStrand	31	chr13	46765144	46765160	protein_coding	C78339	exon	ENSMUSG00000069237	NonProperStrand	104	1	-13.5448
chr8	59990697	59990759	protein_coding	Hmgb2	utr5	ENSMUSG00000054717	ProperStrand	184	chr10	90581080	90581175	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-2.7360
chr13	67643501	67643601	protein_coding	Zfp748	exon	ENSMUSG00000069204	ProperStrand	2	chr11	62418065	62418092	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	2	-inf
chr6	113027232	113027322	non_coding	Gt(ROSA)26Sor	.	ENSMUSG00000086429	NonProperStrand	3	chr16	23110828	23110864	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-inf
chr9	26440743	26440759	DNA	MER5A	MER1_type	chr9MER5A26440741	ProperStrand	108	chr2	168580937	168580990	protein_coding	Sall4	exon	ENSMUSG00000027547	ProperStrand	82	1	-11.5047
chr7	30231467	30231592	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	chr19	8800375	8800463	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	3	-1.4394
chr14	45949538	45949554	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	chr2	26494762	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-1.2886
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr13	100199529	100199546	protein_coding	Mtap1b	exon	ENSMUSG00000052727	NonProperStrand	20	1	-13.5998
chr6	52214176	52214198	antisense	Gm15053	.	ENSMUSG00000055408	NonProperStrand	3	chr13	96374643	96374722	protein_coding	F2r	exon	ENSMUSG00000048376	ProperStrand	9	1	-inf
chr1	107897823	107897839	protein_coding	Zcchc2	intron	ENSMUSG00000038866	NonProperStrand	7	chr1	88247741	88247778	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-9.4633
chr5	115795691	115795779	protein_coding	Cox6a1	utr3	ENSMUSG00000041697	ProperStrand	38	chr3	123210854	123210932	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.8448
chr15	84386919	84386988	protein_coding	Ldoc1l	exon	ENSMUSG00000055745	ProperStrand	4	chr19	8963032	8963048	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-15.8299
chr9	64022854	64022922	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	chr2	26494703	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	8	-2.9718
chr17	45707313	45707336	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr8	106942360	106942376	protein_coding	Dync1li2	utr3	ENSMUSG00000035770	ProperStrand	75	1	-6.2886
chr12	3720080	3720170	protein_coding-noncoding	Dtnb	utr5	ENSMUSG00000071454	ProperStrand	1	chr9	15119646	15119726	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-inf
chr9	88437418	88437435	LINE	L2a	L2	chr9L2a88437396	ProperStrand	10	chr18	38749572	38749666	protein_coding	Spry4	exon	ENSMUSG00000024427	ProperStrand	24	1	-19.3824
chr9	56943376	56949005	protein_coding	Sin3a	exon	ENSMUSG00000042557	ProperStrand	108	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-1.2589
chr8	108233711	108233729	protein_coding	4933405L10Rik	exon	ENSMUSG00000013158	ProperStrand	94	chr1	162967515	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-4.6705
chr1	129271706	129271795	snoRNA	ENSMUSG00000065687_snoU6-53	.	ENSMUSG00000065687	ProperStrand	78	chr14	52829460	52829477	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	4	-inf
chr6	85137654	85137672	protein_coding	Emx1	utr5	ENSMUSG00000033726	ProperStrand	6	chr16	23110939	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.7876
chr15	76175106	76175278	protein_coding	Cyc1	exon	ENSMUSG00000022551	ProperStrand	47	chr5	130300536	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-7.5566
chr4	45000187	45000204	protein_coding	Grhpr	exon	ENSMUSG00000035637	ProperStrand	35	chr8	73419659	73419775	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.1302
chrX	71545662	71545972	protein_coding	Atp6ap1	exon	ENSMUSG00000019087	ProperStrand	11	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-10.4303
chr19	42038700	42038717	protein_coding-noncoding	Mms19	utr3	ENSMUSG00000025159	ProperStrand	9	chr4	131865918	131865979	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.2544
chr1	74050119	74115217	protein_coding	Tns1	utr5	ENSMUSG00000055322	ProperStrand	63	chr17	24857717	24857797	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.2155
chr8	101330175	101330202	LINE	L1MB1	L1	chr8L1MB1101330114	ProperStrand	1	chr2	37255622	37255660	snoRNA	ENSMUSG00000077756_Snord90	.	ENSMUSG00000077756	ProperStrand	167	1	-inf
chrX	63147623	63147703	LINE	L1M4	L1	chrXL1M463147062	NonProperStrand	1	chrX	63124961	63125051	LINE	Lx2	L1	chrXLx263124795	ProperStrand	1	1	-inf
chr5	151755616	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr4	112929378	112929396	protein_coding	Skint6	intron	ENSMUSG00000087194	NonProperStrand	35	1	-8.8214
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	34935071	34935089	protein_coding	Slit3	exon	ENSMUSG00000056427	ProperStrand	61	1	-4.4311
chr11	6520321	6520423	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	chr7	29136552	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	12	-2.4338
chr5	24312066	24312159	protein_coding	Rheb	intron	ENSMUSG00000028945	ProperStrand	8	chr7	133939233	133939264	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	1	-12.4734
chr14	54998793	54998829	protein_coding	Slc7a7	exon	ENSMUSG00000000958	ProperStrand	44	chr3	123210870	123210970	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.5877
chr11	43236403	43238225	protein_coding	Pttg1	exon	ENSMUSG00000020415	ProperStrand	6	chr7	148634702	148634782	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-8.6331
chr11	69548414	69548480	protein_coding	Polr2a	exon	ENSMUSG00000005198	ProperStrand	200	chr15	79913288	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-1.5536
chr9	27107508	27107526	protein_coding	Igsf9b	intron	ENSMUSG00000034275	NonProperStrand	9	chr1	162968442	162968471	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-9.9348
chr4	122971934	122972034	protein_coding	Pabpc4	exon	ENSMUSG00000011257	ProperStrand	85	chr2	26493364	26493427	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-3.1052
chr1	120575757	120575857	protein_coding	Tfcp2l1	utr3	ENSMUSG00000026380	ProperStrand	158	chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-3.9802
chr16	38445589	38445655	protein_coding	Adprh	utr3	ENSMUSG00000002844	ProperStrand	30	chr19	8963084	8963174	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.5028
chr7	86279285	86279382	protein_coding	Mfge8	utr3	ENSMUSG00000030605	ProperStrand	73	chr4	131865855	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-2.7711
chr6	59696258	59696348	LINE	L1_Mus3	L1	chr6L1_Mus359696251	ProperStrand	1	chr6	59696401	59696491	LINE	L1_Mus3	L1	chr6L1_Mus359696283	NonProperStrand	1	1	-inf
chr7	52958453	52958469	protein_coding	Car11	exon	ENSMUSG00000003273	NonProperStrand	250	chr5	92729177	92730846	protein_coding	Sdad1	exon	ENSMUSG00000029415	ProperStrand	63	1	-10.3539
chr11	57872733	57872778	protein_coding	Larp1	utr3	ENSMUSG00000037331	ProperStrand	201	chr9	15514257	15514276	protein_coding	Slc36a4	exon	ENSMUSG00000043885	ProperStrand	94	1	-9.9867
chr13	109127210	109127227	protein_coding	Depdc1b	intron	ENSMUSG00000021697	ProperStrand	19	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-11.2563
chr4	139482849	139482865	lincRNA	4933427I22Rik	exon	ENSMUSG00000085928	ProperStrand	62	chr16	23110529	23110558	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.4059
chr13	59684044	59684060	protein_coding-noncoding	Agtpbp1	utr3	ENSMUSG00000021557	NonProperStrand	2	chr3	58673399	58673415	protein_coding	Clrn1	intron	ENSMUSG00000043850	NonProperStrand	13	1	-inf
chr2	144219680	144219733	protein_coding	Csrp2bp	exon	ENSMUSG00000027425	ProperStrand	32	chr17	23952722	23952738	protein_coding	Srrm2	exon	ENSMUSG00000039218	ProperStrand	521	2	-16.1829
chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	chr17	35384120	35384174	snoRNA	ENSMUSG00000065273_SNORD83	.	ENSMUSG00000065273	ProperStrand	244	1	-6.4798
chr19	8813766	8813788	protein_coding	Wdr74	exon	ENSMUSG00000042729	ProperStrand	15	chr2	170337006	170337022	protein_coding	Pfdn4	utr5	ENSMUSG00000052033	ProperStrand	55	1	-16.2819
chr17	13115666	13115767	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	chr11	6520321	6520340	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	1	-2.2517
chr8	80041484	80041501	protein_coding	Arhgap10	intron	ENSMUSG00000037148	ProperStrand	58	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-7.8073
chr1	59539683	59539700	protein_coding	Fzd7	utr5	ENSMUSG00000041075	ProperStrand	373	chr5	121655099	121655157	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-0.8399
chr9	120038000	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	chr1	59761635	59761694	snoRNA	ENSMUSG00000089093_Snord11	.	ENSMUSG00000089093	ProperStrand	193	1	-2.5621
chr1	34894353	34894415	protein_coding	Fam168b	intron	ENSMUSG00000037503	ProperStrand	23	chr1	162967519	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	3	-12.5372
chr15	11322938	11323028	protein_coding	Tars	exon	ENSMUSG00000022241	ProperStrand	121	chr5	121655052	121655132	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.4917
chr8	73438542	73438642	protein_coding	Mtap1s	exon	ENSMUSG00000019261	ProperStrand	60	chr17	35087894	35087959	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-5.2001
chr11	66839431	66843474	protein_coding	Tmem220	exon	ENSMUSG00000050270	ProperStrand	4	chr1	89673705	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-8.7610
chr1	107743297	107743316	protein_coding	Tnfrsf11a	utr3	ENSMUSG00000026321	NonProperStrand	100	chr13	54787176	54787208	protein_coding	Rnf44	intron	ENSMUSG00000034928	ProperStrand	90	2	-18.0916
chr17	39985355	39985688	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr5	108334196	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	8	-2.2945
chr19	6372527	6372567	protein_coding	Sf1	exon	ENSMUSG00000024949	ProperStrand	251	chr17	24857240	24857303	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	1	-6.8022
chr6	49035904	49035951	protein_coding	Igf2bp3	utr3	ENSMUSG00000029814	ProperStrand	23	chr1	162967490	162967546	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-8.7567
chr5	31117164	31117181	protein_coding	Mapre3	utr5	ENSMUSG00000029166	NonProperStrand	19	chr4	131908236	131908298	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.3472
chr3	19119113	19119172	protein_coding	Mtfr1	utr3	ENSMUSG00000027601	ProperStrand	13	chr10	5991432	5991532	protein_coding	Akap12	exon	ENSMUSG00000038587	ProperStrand	1008	2	-17.0299
chr11	60539769	60539819	protein_coding	Flii	intron	ENSMUSG00000002812	ProperStrand	42	chr9	15118246	15118321	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-6.9402
chr17	46824092	46824110	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr16	22858114	22858165	protein_coding	Dnajb11	exon	ENSMUSG00000004460	ProperStrand	9	1	-13.1174
chr1	71692237	71694596	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr8	113447131	113447170	protein_coding	St3gal2	intron	ENSMUSG00000031749	ProperStrand	206	1	-5.4003
chr19	4861477	4861602	protein_coding	Actn3	exon	ENSMUSG00000006457	ProperStrand	2	chrX	159218739	159218756	protein_coding	Txlng	utr3	ENSMUSG00000038344	ProperStrand	45	1	-19.7664
chr10	75359822	75360194	protein_coding	Smarcb1	exon	ENSMUSG00000000902	ProperStrand	109	chr15	82980135	82980184	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-5.9597
chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr12	110874223	110874292	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	3	-3.0234
chr5	115983444	115983460	protein_coding	Pxn	intron	ENSMUSG00000029528	ProperStrand	171	chr17	5347022	5347040	protein_coding	Arid1b	utr3	ENSMUSG00000069729	NonProperStrand	22	1	-13.2435
chr16	91729699	91729723	protein_coding	Itsn1	utr5	ENSMUSG00000022957	ProperStrand	172	chr17	30772308	30772324	protein_coding	Dnahc8	utr5	ENSMUSG00000033826	ProperStrand	246	2	-13.3224
chr4	134480187	134480219	protein_coding	D4Wsu53e	exon	ENSMUSG00000037266	ProperStrand	15	chr2	53003875	53003891	protein_coding	Prpf40a	exon	ENSMUSG00000061136	ProperStrand	129	1	-14.6080
chrX	7419448	7419465	protein_coding	Otud5	exon	ENSMUSG00000031154	NonProperStrand	16	chr2	26494708	26494759	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-9.2847
chr16	8946688	8946778	LTR	RMER19A	ERVK	chr16RMER19A8946206	NonProperStrand	1	chr5	113912820	113912910	LTR	RMER19A	ERVK	chr5RMER19A113912581	NonProperStrand	1	1	-inf
chr4	53097328	53097418	protein_coding	Abca1	exon	ENSMUSG00000015243	ProperStrand	15	chr18	35716711	35716791	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.7126
chr16	16323855	16324068	protein_coding	Dnm1l	exon	ENSMUSG00000022789	NonProperStrand	38	chr6	129628834	129628851	protein_coding	Klrc1	exon	ENSMUSG00000030167	NonProperStrand	49	1	-14.6608
chr3	33935109	33935198	protein_coding	Fxr1	intron	ENSMUSG00000027680	ProperStrand	58	chr16	23110909	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	9	-9.0592
chr8	107865316	107865335	protein_coding	Fhod1	intron	ENSMUSG00000014778	ProperStrand	64	chr4	131908356	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.3270
chr7	136800631	136800649	SINE	RSINE1	B4	chr7RSINE1136800606	ProperStrand	216	chr10	84011165	84011203	lincRNA	C330046G13Rik	intron	ENSMUSG00000085671	ProperStrand	1	1	-inf
chr7	146068415	146068431	protein_coding	Ppp2r2d	intron	ENSMUSG00000041769	NonProperStrand	7	chr16	23110526	23110557	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-6.6152
chr4	134081838	134081875	protein_coding	Fam54b	utr3	ENSMUSG00000046671	ProperStrand	10	chr1	194571819	194571881	snRNA	ENSMUSG00000064881_U5	.	ENSMUSG00000064881	ProperStrand	187	1	-14.7104
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr2	32049368	32049468	protein_coding	Prrc2b	exon	ENSMUSG00000039262	ProperStrand	344	1	-3.0492
chr7	117238038	117238073	protein_coding	Zfp143	utr3	ENSMUSG00000061079	ProperStrand	4	chr15	5068443	5068480	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-11.7103
chr17	28450696	28450714	protein_coding	Fance	utr5	ENSMUSG00000007570	ProperStrand	23	chr9	15119639	15119764	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	4	-14.2533
chr12	89650435	89650482	protein_coding	Adck1	intron	ENSMUSG00000021044	ProperStrand	16	chr2	63936036	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-10.5385
chr9	53475225	53475242	protein_coding	Cul5	utr5	ENSMUSG00000032030	ProperStrand	87	chr8	73419726	73419773	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.4781
chr12	16683827	16683845	protein_coding	Greb1	intron	ENSMUSG00000036523	ProperStrand	7	chr5	107050244	107050261	protein_coding	Zfp644	intron	ENSMUSG00000049606	ProperStrand	35	1	-18.9384
chr1	181067485	181067503	protein_coding	Smyd3	intron	ENSMUSG00000055067	NonProperStrand	190	chr15	79908941	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	3	-8.2383
chr14	26279027	26322142	lincRNA	D930049A15Rik	exon	ENSMUSG00000087535	ProperStrand	13	chr11	6428113	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-6.1494
chr11	59778161	59778177	protein_coding	Rasd1	exon	ENSMUSG00000049892	NonProperStrand	49	chr14	76247777	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-4.5582
chr9	15123930	15123950	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	NonProperStrand	100	chr9	120039551	120039679	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	4	-8.7738
chr19	44380236	44380326	protein_coding	Scd2	utr3	ENSMUSG00000025203	ProperStrand	219	chr11	68853906	68853960	tRNA	tRNA396-ProCGG	.	282922	ProperStrand	48	1	-11.1663
chr5	65688645	65693174	protein_coding	Rfc1	exon	ENSMUSG00000029191	ProperStrand	53	chr11	69483190	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.6634
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr1	93342189	93345291	protein_coding	Per2	exon	ENSMUSG00000055866	ProperStrand	114	1	-7.3130
chr18	38924217	38924233	protein_coding	Arhgap26	intron	ENSMUSG00000036452	NonProperStrand	29	chr19	8800358	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-8.1414
chr11	6256510	6256551	protein_coding	Ogdh	utr3	ENSMUSG00000020456	ProperStrand	42	chr7	52382752	52382787	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-7.4627
chr15	75726678	75726722	protein_coding	Eef1d	exon	ENSMUSG00000055762	ProperStrand	99	chr11	69481387	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-2.3258
chr7	118214190	118214208	protein_coding	Eif4g2	utr3	ENSMUSG00000005610	NonProperStrand	30	chr5	74489543	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-5.1050
chr5	130295444	130295524	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	chr1	145626102	145626192	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-1.3226
chr13	36960347	36960364	protein_coding	F13a1	utr3	ENSMUSG00000039109	NonProperStrand	15	chr16	23110877	23110967	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.0842
chr2	33258682	33258701	SINE	PB1D7	Alu	chr2PB1D733258664	NonProperStrand	1	chr1	162965981	162965999	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-inf
chr16	4481201	4481236	protein_coding	Srl	utr3	ENSMUSG00000022519	ProperStrand	8	chr2	26494708	26494802	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	4	-18.9193
chr2	18604792	18604882	protein_coding	Bmi1	exon	ENSMUSG00000026739	NonProperStrand	4	chr2	61631584	61631664	protein_coding	Psmd14	intron	ENSMUSG00000026914	ProperStrand	16	1	-21.9369
chr16	18533281	18533381	protein_coding	Gnb1l	intron	ENSMUSG00000000884	ProperStrand	25	chr1	162965557	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	NonProperStrand	10	1	-18.4945
chr15	72794011	72794076	protein_coding	Trappc9	exon	ENSMUSG00000047921	ProperStrand	44	chr2	130101257	130101310	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-7.2081
chr15	100325117	100325171	protein_coding	Csrnp2	intron	ENSMUSG00000044636	ProperStrand	8	chr9	15119646	15119736	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-6.5261
chr3	153574612	153574654	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	chr10	90581034	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-1.6036
chr4	148902244	148902261	protein_coding	Ctnnbip1	intron	ENSMUSG00000028988	ProperStrand	10	chr7	29136597	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.7572
chr17	13996934	13998816	protein_coding	Mllt4	exon	ENSMUSG00000068036	ProperStrand	156	chr11	69481366	69481446	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-1.6030
chr11	48616646	48616736	protein_coding-noncoding	Gnb2l1	utr5	ENSMUSG00000020372	ProperStrand	21	chr17	24857782	24857851	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.2024
chr1	59247329	59247395	protein_coding	Als2	intron	ENSMUSG00000026024	ProperStrand	32	chr5	121655034	121655126	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	4	-15.5669
chr4	150859626	150859643	protein_coding	Camta1	intron	ENSMUSG00000014592	NonProperStrand	34	chr11	69483199	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.4615
chr5	129245364	129245380	protein_coding	Piwil1	exon	ENSMUSG00000029423	ProperStrand	1	chr5	122019000	122020649	protein_coding	Aldh2	exon	ENSMUSG00000029455	ProperStrand	108	1	-inf
chr11	93741377	93741416	protein_coding	Utp18	exon	ENSMUSG00000054079	ProperStrand	3	chr10	110918642	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-9.6547
chr3	79223176	79223193	protein_coding	Gm17359	intron	ENSMUSG00000091685	NonProperStrand	50	chr10	23505151	23505237	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.4914
chr19	29686988	29687088	protein_coding	Ermp1	utr3	ENSMUSG00000046324	ProperStrand	103	chr15	79913288	79913339	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.6237
chr2	165911204	165911235	protein_coding	Sulf2	exon	ENSMUSG00000006800	ProperStrand	171	chr18	33987695	33987729	protein_coding	Epb4.1l4a	intron	ENSMUSG00000024376	ProperStrand	16	1	-13.8965
chr12	111862783	111863650	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr12	17552947	17553030	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	9	-14.0296
chr17	56753341	56753566	protein_coding	Rpl36	exon	ENSMUSG00000057863	ProperStrand	62	chr11	69483136	69483246	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-4.2450
mmu-miR-6412	1	18	miRNA	mmu-miR-6412	.	mmu-miR-6412	ProperStrand	3	chr19	8800355	8800419	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-9.7434
chr4	56803866	56804971	protein_coding	Ikbkap	exon	ENSMUSG00000028431	ProperStrand	44	chr12	17552940	17553020	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-5.6952
chr11	79838423	79838483	protein_coding	Suz12	exon	ENSMUSG00000017548	ProperStrand	53	chr11	116938556	116938646	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-6.4043
chr9	96586972	96587062	protein_coding	Zbtb38	exon	ENSMUSG00000040433	ProperStrand	9	chr11	69483202	69483282	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-6.0733
chr18	35871472	35871514	protein_coding	1700066B19Rik	intron	ENSMUSG00000073598	NonProperStrand	14	chr19	8799581	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-9.7095
chr5	31507479	31508443	protein_coding	Ppm1g	exon	ENSMUSG00000029147	ProperStrand	69	chr15	95778710	95778810	protein_coding	Ano6	exon	ENSMUSG00000064210	ProperStrand	39	3	-19.1076
chr10	61201932	61201969	protein_coding	H2afy2	utr3	ENSMUSG00000020086	ProperStrand	16	chr4	131865860	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	5	-17.5111
chr13	49473398	49473415	protein_coding	Bicd2	exon	ENSMUSG00000037933	ProperStrand	18	chr5	130300496	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-7.9176
chr6	111124865	111124886	protein_coding	Grm7	intron	ENSMUSG00000056755	NonProperStrand	19	chr4	131865855	131865981	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-12.7344
chr12	110874223	110874291	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	chr18	33954820	33954910	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	5	-5.6938
chr11	69002198	69002214	protein_coding	Alox8	exon	ENSMUSG00000020891	NonProperStrand	31	chr9	15130935	15131005	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	1	-10.5454
chr16	57391758	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr2	130102055	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	2	-1.5273
chr1	37474186	37474234	protein_coding	6330578E17Rik	utr3	ENSMUSG00000026112	ProperStrand	14	chr17	24857738	24857828	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	6	-inf
chr8	87577529	87577560	protein_coding	Tnpo2	intron	ENSMUSG00000031691	ProperStrand	92	chr14	76247725	76247843	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-3.3769
chr16	18240810	18240890	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	chr13	49779677	49779767	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-3.0168
chr11	6520333	6520423	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	chr11	77995189	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-1.2139
chr13	28653437	28700391	lincRNA	2610307P16Rik	exon	ENSMUSG00000085936	ProperStrand	154	chr18	73693168	73693187	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-3.7241
chr4	137772974	137773093	protein_coding	Hp1bp3	utr5	ENSMUSG00000028759	ProperStrand	21	chr9	63868722	63868739	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	1	-10.7098
chr7	86609715	86609805	protein_coding	Polg	exon	ENSMUSG00000039176	ProperStrand	93	chr7	117166719	117166799	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-3.9819
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr9	59516827	59519797	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	2	-2.5689
chr12	55797772	55797862	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	chr4	56910527	56910615	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-1.1489
chr8	129468739	129468764	protein_coding	Tomm20	intron	ENSMUSG00000058779	ProperStrand	55	chr4	131865884	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.9045
chr13	9833561	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr18	78016316	78016365	protein_coding	Atp5a1	exon	ENSMUSG00000025428	ProperStrand	254	2	-4.1077
chr2	145077957	145209256	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	chr9	120037898	120038049	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	4	-2.4447
chr17	73510247	73510277	protein_coding	Lclat1	intron	ENSMUSG00000054469	ProperStrand	10	chr19	8963076	8963166	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	5	-inf
chr9	69004943	69004964	protein_coding	Rora	intron	ENSMUSG00000032238	ProperStrand	25	chr15	79908929	79908956	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-7.2107
chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	chr8	73420086	73420125	protein_coding	Rpl18a	exon	ENSMUSG00000045128	ProperStrand	394	1	-6.5289
chr19	42379298	42383578	protein_coding	Crtac1	exon	ENSMUSG00000042401	ProperStrand	26	chr7	52382011	52382039	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-8.3878
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	76471660	76471676	protein_coding	Prkra	exon	ENSMUSG00000002731	NonProperStrand	65	1	-4.3101
chr4	135516803	135518076	protein_coding	Hmgcl	exon	ENSMUSG00000028672	ProperStrand	8	chr2	41199972	41199989	protein_coding	Lrp1b	exon	ENSMUSG00000049252	ProperStrand	376	1	-13.7701
chr1	34285532	34285549	protein_coding	Dst	exon	ENSMUSG00000026131	ProperStrand	461	chr13	96102644	96102712	snoRNA	ENSMUSG00000077380_SNORA68	.	ENSMUSG00000077380	ProperStrand	51	1	-9.5573
chr4	128867196	128867212	protein_coding	Yars	exon	ENSMUSG00000028811	ProperStrand	131	chr8	26827320	26827337	protein_coding	Whsc1l1	utr3	ENSMUSG00000054823	NonProperStrand	17	1	-14.3135
chr5	140865152	140865170	protein_coding	Snx8	exon	ENSMUSG00000029560	ProperStrand	106	chr17	56701424	56701524	protein_coding	Safb2	utr3	ENSMUSG00000042625	ProperStrand	29	1	-13.6427
chr17	39985650	39985749	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr9	40612124	40612164	snoRNA	ENSMUSG00000075924_Snord14d	.	ENSMUSG00000075924	ProperStrand	131	1	-4.4201
chr5	128220234	128220324	LINE	Lx	L1	chr5Lx128214218	ProperStrand	1	chr2	130699111	130699191	processed_transcript	A730017L22Rik	.	ENSMUSG00000085566	NonProperStrand	2	1	-inf
chr10	80644345	80644663	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr1	90123798	90124639	protein_coding	Heatr7b1	utr5	ENSMUSG00000079429	ProperStrand	147	1	-4.3629
chr6	129183598	129183616	lincRNA	2310001H17Rik	intron	ENSMUSG00000085930	ProperStrand	2	chr11	6428100	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-10.4671
chr4	131908448	131908469	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr11	69788676	69788693	protein_coding	Rai12	exon	ENSMUSG00000018565	NonProperStrand	10	1	-10.9102
chr2	126472468	126472484	protein_coding	Gabpb1	exon	ENSMUSG00000027361	ProperStrand	54	chr19	8963036	8963067	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.4527
chr10	115776182	115776199	protein_coding	Ptprb	intron	ENSMUSG00000020154	ProperStrand	2	chr8	109417579	109417598	protein_coding	Cirh1a	utr5	ENSMUSG00000041438	ProperStrand	40	1	-inf
chr9	108396385	108396475	protein_coding	Usp19	exon	ENSMUSG00000006676	ProperStrand	57	chr18	33954912	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-3.6002
chr5	122878902	122878971	protein_coding	Anapc7	intron	ENSMUSG00000029466	ProperStrand	11	chr3	108006184	108006200	protein_coding	Atxn7l2	exon	ENSMUSG00000048997	ProperStrand	45	1	-17.3521
chr15	79162440	79162458	SINE	B3A	B2	chr15B3A79162365	NonProperStrand	8	chr5	108336363	108336408	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-8.9530
chr18	54582045	54582061	lincRNA	9430076G02Rik	exon	ENSMUSG00000084814	ProperStrand	30	chr8	113795016	113795116	protein_coding	Rfwd3	utr3	ENSMUSG00000033596	ProperStrand	71	1	-14.3798
chr19	44188402	44188450	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr3	69293600	69293617	protein_coding	Ppm1l	intron	ENSMUSG00000027784	NonProperStrand	29	1	-9.2575
chr1	58458007	58458208	protein_coding	Bzw1	exon	ENSMUSG00000051223	ProperStrand	14	chr16	23110829	23110873	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.2008
chr10	61329160	61330213	protein_coding	Col13a1	exon	ENSMUSG00000058806	ProperStrand	120	chr11	106362556	106362602	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-6.0333
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr13	22098354	22098371	protein_coding	Prss16	intron	ENSMUSG00000006179	ProperStrand	78	1	-10.8428
chr19	8799581	8799636	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	chr13	75905602	75905651	snoRNA	ENSMUSG00000077449_SNORA42	.	ENSMUSG00000077449	ProperStrand	26	2	-13.4728
chr9	15119630	15119766	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	chr2	26768368	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	26	-2.0535
chr4	116827680	116828219	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	chr19	8798740	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-2.1340
chr8	108228551	108228568	protein_coding	E130303B06Rik	exon	ENSMUSG00000013155	NonProperStrand	6	chr9	15118322	15118357	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-8.0740
chr17	46861595	46861611	protein_coding	Pex6	exon	ENSMUSG00000002763	ProperStrand	292	chr5	50370337	50370606	protein_coding	Gpr125	exon	ENSMUSG00000029090	ProperStrand	29	1	-11.6113
chr6	55434736	55434754	protein_coding	Adcyap1r1	intron	ENSMUSG00000029778	NonProperStrand	12	chr14	52829497	52829563	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-11.4787
chr15	96063288	96063304	lincRNA	4833422M21Rik	exon	ENSMUSG00000085460	NonProperStrand	37	chr16	23110828	23110890	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.7935
chr14	73611519	73612853	protein_coding	Rb1	exon	ENSMUSG00000022105	ProperStrand	67	chr9	120038615	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.8429
chr6	122680138	122686613	protein_coding	Slc2a3	exon	ENSMUSG00000003153	ProperStrand	682	chr2	158182156	158182291	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	5	-5.8220
chr3	134151041	134151057	lincRNA	Gm16742	intron	ENSMUSG00000084777	NonProperStrand	42	chr2	60178244	60178262	protein_coding	Ly75	exon	ENSMUSG00000026980	ProperStrand	59	1	-14.0644
chr17	56448967	56448999	protein_coding	Uhrf1	exon	ENSMUSG00000001228	ProperStrand	229	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	1	-4.4165
chr13	96247406	96248477	protein_coding	S100z	exon	ENSMUSG00000021679	NonProperStrand	43	chrX	84483695	84483715	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-8.9176
chr19	44379185	44379222	protein_coding	Scd2	utr3	ENSMUSG00000025203	ProperStrand	219	chr9	48845924	48845955	protein_coding	Usp28	exon	ENSMUSG00000032267	ProperStrand	63	1	-10.6187
chr1	162966812	162966853	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	chr16	43886794	43886843	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	2	-2.8368
chr12	31985079	31985095	protein_coding	Lamb1	exon	ENSMUSG00000002900	NonProperStrand	45	chr5	23358027	23358062	snoRNA	ENSMUSG00000093321_Snord93	.	ENSMUSG00000093321	ProperStrand	218	1	-11.3061
chr12	79027800	79027818	LTR	MER34A1	ERV1	chr12MER34A179027761	NonProperStrand	2	chr7	118219713	118219740	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-11.5289
chr3	33699277	33699342	protein_coding	Ttc14	exon	ENSMUSG00000027677	ProperStrand	25	chr3	126665278	126665296	protein_coding	Ank2	exon	ENSMUSG00000032826	ProperStrand	30	2	-inf
chr5	93077822	93077838	protein_coding	Ccdc158	exon	ENSMUSG00000050050	ProperStrand	11	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.8470
chr1	3661500	3661517	protein_coding	Xkr4	utr5	ENSMUSG00000051951	ProperStrand	59	chr4	116828378	116828453	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-8.4160
chr3	20238638	20238656	protein_coding	Agtr1b	intron	ENSMUSG00000054988	NonProperStrand	39	chr13	49779667	49779700	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-7.8741
chr17	32334198	32334298	protein_coding	Brd4	utr3	ENSMUSG00000024002	ProperStrand	121	chr8	13416897	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	4	-15.6920
chr8	13953228	13953283	protein_coding	2610019F03Rik	utr3	ENSMUSG00000050052	ProperStrand	4	chr16	23110968	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.6489
chr13	30633130	30633153	protein_coding	Uqcrfs1	exon	ENSMUSG00000038462	ProperStrand	24	chr3	88497863	88497980	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-9.3045
chr11	53915090	53923725	protein_coding	P4ha2	utr5	ENSMUSG00000018906	ProperStrand	8	chr16	23111777	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-17.9752
chr11	116938711	116938751	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	chr1	9932550	9932624	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	3	-3.6765
chr17	13117225	13117304	protein_coding	Tcp1	exon	ENSMUSG00000068039	ProperStrand	116	chr5	130300457	130300547	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.4601
chr8	75071970	75071987	protein_coding	Med26	utr5	ENSMUSG00000045248	ProperStrand	45	chr16	20679732	20679779	protein_coding	Eif4g1	exon	ENSMUSG00000045983	ProperStrand	199	1	-11.4883
chr11	69812085	69812175	protein_coding	Phf23	exon	ENSMUSG00000018572	ProperStrand	25	chr10	110918553	110918633	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-5.1172
chr1	53409486	53409502	protein_coding	Asnsd1	utr5	ENSMUSG00000026095	NonProperStrand	105	chr9	15119631	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.7125
chr11	115200753	115200770	protein_coding	Otop3	exon	ENSMUSG00000018862	ProperStrand	59	chr14	76247731	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-7.0377
chr2	35517015	35517031	protein_coding	Dab2ip	exon	ENSMUSG00000026883	NonProperStrand	58	chr4	131826081	131826126	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	1	-9.2857
chr9	64023702	64023746	snoRNA	ENSMUSG00000064918_SNORD18	.	ENSMUSG00000064918	ProperStrand	370	chr4	131866154	131866215	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-1.6265
chr13	18955953	18958023	protein_coding	Vps41	exon	ENSMUSG00000041236	ProperStrand	31	chr6	124665436	124665503	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	2	-13.1800
chr11	115940498	115940598	protein_coding	Wbp2	utr3	ENSMUSG00000034341	ProperStrand	39	chr9	120037992	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-5.5437
mmu-miR-6238	1	20	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr4	133742939	133742956	protein_coding	Ccdc21	utr5	ENSMUSG00000037443	ProperStrand	112	1	-9.2819
chr9	72540257	72540303	protein_coding	Nedd4	intron	ENSMUSG00000032216	ProperStrand	308	chr1	89681177	89681267	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-2.4161
chr14	76906818	76906849	protein_coding	Tsc22d1	utr3	ENSMUSG00000022010	ProperStrand	86	chr12	88778631	88778722	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-5.7888
chr4	118909557	118910473	protein_coding	Lepre1	exon	ENSMUSG00000028641	ProperStrand	21	chr8	98269962	98270096	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	2	-12.2696
chr11	69870769	69870785	protein_coding	Asgr1	exon	ENSMUSG00000020884	NonProperStrand	145	chr19	8983429	8983466	protein_coding	Ganab	exon	ENSMUSG00000071650	ProperStrand	145	1	-9.7719
chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	chr11	106362303	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	2	-1.2353
chr15	34805445	34805462	protein_coding	Stk3	utr3	ENSMUSG00000022329	NonProperStrand	28	chr2	34629595	34629648	protein_coding	Hspa5	exon	ENSMUSG00000026864	ProperStrand	181	2	-23.4155
chr17	27729605	27729705	protein_coding	Nudt3	intron	ENSMUSG00000024213	ProperStrand	26	chr16	23110977	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.2392
chr5	128938781	128938798	protein_coding	Tmem132d	utr5	ENSMUSG00000034310	ProperStrand	20	chr7	116663634	116663767	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.5385
chr6	91706453	91706511	protein_coding	Slc6a6	utr3	ENSMUSG00000030096	ProperStrand	206	chr4	122970439	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	6	-20.1325
chr6	49359068	49359131	protein_coding	Stk31	exon	ENSMUSG00000023403	ProperStrand	3	chr13	23528212	23528284	tRNA	tRNA103-LysCTT	.	900249	ProperStrand	180	1	-17.6080
chr17	24563844	24570137	protein_coding	Eci1	exon	ENSMUSG00000024132	ProperStrand	6	chr16	23109045	23109090	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	2	-18.3068
chr19	11271200	11271217	protein_coding	Ms4a13	utr5	ENSMUSG00000057240	ProperStrand	59	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-3.6233
chr6	146261384	146261401	protein_coding	Itpr2	exon	ENSMUSG00000030287	NonProperStrand	42	chr5	130295414	130295471	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	2	-9.6918
chr16	37777391	37777408	protein_coding	Fstl1	exon	ENSMUSG00000022816	ProperStrand	179	chr7	29136552	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-0.7886
chr11	69481338	69481428	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	chr19	44188468	44188548	snoRNA	ENSMUSG00000077391_SNORA12	.	ENSMUSG00000077391	ProperStrand	506	3	-1.2628
chr5	138079408	138079685	protein_coding	Lrch4	exon	ENSMUSG00000093445	ProperStrand	16	chr4	131866159	131866239	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-10.1915
chr15	103180097	103180150	protein_coding	Itga5	exon	ENSMUSG00000000555	ProperStrand	28	chr2	26768395	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	2	-11.4683
chr5	76728832	76728848	protein_coding	Clock	intron	ENSMUSG00000029238	NonProperStrand	64	chr8	46036362	46036429	protein_coding	Fat1	exon	ENSMUSG00000070047	ProperStrand	306	1	-9.9185
chr9	57385425	57385441	protein_coding	2310046O06Rik	utr5	ENSMUSG00000032305	ProperStrand	135	chr11	68886963	68886990	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-2.6678
chr4	88056570	88056598	protein_coding	BC057079	utr3	ENSMUSG00000038368	ProperStrand	52	chr6	71832597	71832687	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	4	-17.9067
chr11	98082444	98084018	protein_coding	Cdk12	exon	ENSMUSG00000003119	ProperStrand	50	chr16	23111465	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.5189
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr14	76247767	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	3	-2.4034
chr16	34670090	34671192	protein_coding	Ropn1	exon	ENSMUSG00000022832	NonProperStrand	3	chr2	152102742	152104767	protein_coding	Csnk2a1	exon	ENSMUSG00000074698	ProperStrand	91	2	-inf
chr1	87983896	87983996	snoRNA	ENSMUSG00000077274_SNORA26	.	ENSMUSG00000077274	ProperStrand	361	chr5	74489586	74489676	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	2	-1.7979
chr1	71694595	71694652	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr7	134341340	134341357	protein_coding	Tbc1d10b	utr3	ENSMUSG00000042492	ProperStrand	187	1	-5.5884
chr15	8181185	8181201	protein_coding	2410089E03Rik	exon	ENSMUSG00000039801	ProperStrand	43	chr10	39978353	39978484	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	3	-14.0829
chr6	135087926	135087942	protein_coding	Hebp1	exon	ENSMUSG00000042770	ProperStrand	7	chr4	131908810	131908871	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.0493
chr12	58691976	58691992	antisense	4921518K17Rik	.	ENSMUSG00000085851	ProperStrand	75	chr15	88527568	88527596	protein_coding	Brd1	intron	ENSMUSG00000022387	ProperStrand	70	1	-12.5556
chr6	47738068	47738104	misc_RNA	Y_RNA	.	ENSMUSG00000065701	ProperStrand	129	chr9	120038613	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.7545
chr5	145016688	145016704	protein_coding	Bri3	exon	ENSMUSG00000047843	ProperStrand	16	chr16	23110509	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-8.2002
chr14	14925190	14925280	protein_coding	Atxn7	intron	ENSMUSG00000021738	ProperStrand	6	chr4	131908357	131908447	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-5.6461
chr17	56563005	56563513	protein_coding	Ptprs	exon	ENSMUSG00000013236	ProperStrand	152	chr8	87481710	87481726	protein_coding	Rnaseh2a	exon	ENSMUSG00000052926	NonProperStrand	1	1	-inf
chr14	75729578	75729936	protein_coding	Zc3h13	exon	ENSMUSG00000022000	ProperStrand	42	chr1	89091564	89092064	protein_coding	Chrnd	exon	ENSMUSG00000026251	ProperStrand	32	1	-15.2950
chr10	21712057	21712092	protein_coding	Sgk1	utr5	ENSMUSG00000019970	ProperStrand	55	chr1	162967491	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-6.1700
chr17	28729224	28731148	protein_coding	Srpk1	exon	ENSMUSG00000004865	ProperStrand	61	chr9	120038611	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	3	-7.6909
chr13	97947242	97947326	protein_coding-noncoding	Gfm2	utr5	ENSMUSG00000021666	ProperStrand	1	chr12	106269464	106269554	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-inf
chr7	116663634	116663762	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	chr13	23392003	23392066	tRNA	tRNA97-ValCAC	.	200397	ProperStrand	52	6	-15.5147
chr7	13511113	13511948	protein_coding	Rps5	exon	ENSMUSG00000012848	ProperStrand	108	chr4	131908236	131908344	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-1.4269
chr2	25563070	25563086	antisense	A230005M16Rik	.	ENSMUSG00000087612	ProperStrand	103	chr7	117189932	117189972	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.3815
chr7	73219242	73219302	protein_coding	Snrpa1	utr3	ENSMUSG00000030512	ProperStrand	71	chr16	23111451	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.0362
chr8	77742558	77742574	protein_coding	Rasd2	exon	ENSMUSG00000034472	NonProperStrand	237	chr4	131865855	131865967	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-1.0816
chr9	117949943	117949961	protein_coding	Azi2	utr5	ENSMUSG00000039285	ProperStrand	12	chr2	26494777	26494826	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-6.2196
chr10	80949475	80949492	protein_coding	Ncln	utr3	ENSMUSG00000020238	NonProperStrand	18	chr4	131865855	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.8813
chr2	158185567	158185647	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr14	76372291	76372381	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	1	-2.4351
chr1	121539050	121539073	protein_coding	Epb4.1l5	exon	ENSMUSG00000026383	ProperStrand	22	chr6	142983668	142984756	protein_coding	5730419I09Rik	exon	ENSMUSG00000030279	ProperStrand	81	1	-14.7453
chr7	109147902	109148002	protein_coding	Numa1	utr5	ENSMUSG00000066306	ProperStrand	148	chr17	35089182	35089208	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-3.7607
chr5	138612970	138612986	protein_coding	Mcm7	utr5	ENSMUSG00000029730	ProperStrand	258	chr19	8963116	8963183	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-0.8832
chr9	70091163	70091190	protein_coding	Myo1e	intron	ENSMUSG00000032220	ProperStrand	36	chr16	23110967	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.8249
chr19	7532308	7532324	protein_coding	Rtn3	exon	ENSMUSG00000024758	ProperStrand	35	chr11	106362304	106362325	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-6.9108
chr4	131866608	131866642	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	chr13	21261553	21261601	tRNA	tRNA999-MetCAT	.	225258	ProperStrand	63	1	-9.0071
mmu-miR-6240	3	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr8	96816621	96818966	protein_coding	Nup93	exon	ENSMUSG00000032939	ProperStrand	43	3	-14.9820
chr16	11144201	11144301	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr7	51505241	51505308	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	NonProperStrand	1	1	-inf
chr17	89046019	89046109	protein_coding	Ston1	intron	ENSMUSG00000033855	ProperStrand	4	chr11	6428083	6428163	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-8.6824
chr8	126532102	126532118	protein_coding	Taf5l	exon	ENSMUSG00000038697	ProperStrand	23	chr6	47139185	47139234	protein_coding	Cntnap2	intron	ENSMUSG00000039419	NonProperStrand	283	1	-12.1452
chr8	72582837	72582907	protein_coding	Sugp1	intron	ENSMUSG00000011306	ProperStrand	20	chr7	116664819	116664909	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-4.5800
chr7	134341340	134341357	protein_coding	Tbc1d10b	utr3	ENSMUSG00000042492	ProperStrand	187	chr10	90432659	90432679	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	1	-8.3438
chr13	9833551	9833679	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr12	114216854	114216873	protein_coding	Btbd6	utr3	ENSMUSG00000002803	ProperStrand	2	2	-inf
chr11	98772836	98782588	protein_coding	Cdc6	utr3	ENSMUSG00000017499	ProperStrand	27	chr16	23110901	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	11	-21.1226
chr1	6239765	6239832	protein_coding	Rb1cc1	exon	ENSMUSG00000025907	ProperStrand	13	chr4	149616252	149618125	protein_coding	Eno1	exon	ENSMUSG00000063524	ProperStrand	432	1	-12.4751
chr9	53382555	53382572	SINE	ID_B1	B4	chr9ID_B153382464	ProperStrand	11	chr2	91436228	91436267	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-10.9504
chr2	9985901	9985917	protein_coding	Atp5c1	exon	ENSMUSG00000025781	ProperStrand	138	chr7	87235466	87235507	protein_coding	Zfp710	utr3	ENSMUSG00000048897	ProperStrand	229	1	-8.9583
chr9	78023110	78023213	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr19	10270419	10270437	protein_coding	Fads1	utr3	ENSMUSG00000010663	ProperStrand	21	2	-12.7842
chr19	23331991	23332071	protein_coding	Smc5	exon	ENSMUSG00000024943	ProperStrand	146	chr5	31481794	31481884	protein_coding	Gtf3c2	intron	ENSMUSG00000029144	ProperStrand	22	1	-13.5635
chr3	100391746	100391777	protein_coding	Man1a2	exon	ENSMUSG00000008763	ProperStrand	18	chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	1	-11.8869
chr11	78139180	78139273	protein_coding	Aldoc	exon	ENSMUSG00000017390	ProperStrand	4	chr1	162967518	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-8.9926
chrX	84483696	84483714	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr5	130300458	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	6	-0.9556
chr6	143139173	143139218	protein_coding	Etnk1	intron	ENSMUSG00000030275	ProperStrand	61	chr17	27956304	27956394	protein_coding	D17Wsu92e	intron	ENSMUSG00000056692	ProperStrand	61	8	-19.1566
chr8	97346592	97346682	protein_coding	Ciapin1	utr3	ENSMUSG00000031781	ProperStrand	24	chr3	123210891	123210971	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.6860
chr5	137961807	137961908	protein_coding	Gigyf1	exon	ENSMUSG00000029714	ProperStrand	49	chr3	123210854	123210889	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.4031
chr8	54603232	54603259	protein_coding	Aga	intron	ENSMUSG00000031521	ProperStrand	7	chr5	121655052	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-13.0701
chrX	72214248	72214264	protein_coding-noncoding	Gab3	utr3	ENSMUSG00000032750	ProperStrand	420	chr7	51505506	51505591	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	1	-4.9445
chr5	115848210	115848227	antisense	Gm13832	.	ENSMUSG00000087292	ProperStrand	47	chr3	123210891	123210908	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.4742
chr3	127265570	127265660	protein_coding	4930422G04Rik	exon	ENSMUSG00000051278	ProperStrand	10	chr4	131865873	131865953	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.0395
chr4	132806030	132806131	protein_coding	Map3k6	exon	ENSMUSG00000028862	NonProperStrand	28	chr7	87460864	87460940	protein_coding	Prc1	utr3	ENSMUSG00000038943	ProperStrand	35	1	-15.9356
chr17	27768020	27768110	protein_coding-noncoding	Rps10	utr3	ENSMUSG00000052146	ProperStrand	3	chrX	34622940	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-9.3485
chr10	39219855	39219872	protein_coding	Fyn	intron	ENSMUSG00000019843	NonProperStrand	17	chr1	89673712	89673763	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-5.6845
chr7	26035753	26035776	protein_coding	Erf	utr5	ENSMUSG00000040857	ProperStrand	20	chr9	15118247	15118320	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-9.1745
chr16	95801861	95801888	protein_coding	Erg	intron	ENSMUSG00000040732	ProperStrand	4	chr11	69481335	69481433	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	3	-19.4052
chr9	65049532	65049609	snRNA	ENSMUSG00000075930_U5	.	ENSMUSG00000075930	ProperStrand	175	chr11	69483190	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	7	-9.1293
chr6	55003152	55005780	protein_coding	Gars	exon	ENSMUSG00000029777	ProperStrand	71	chr9	120038477	120038567	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.7411
chr8	67209515	67209595	protein_coding	Sc4mol	utr5	ENSMUSG00000031604	ProperStrand	24	chr7	116663675	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.1859
chr12	58691976	58691992	antisense	4921518K17Rik	.	ENSMUSG00000085851	ProperStrand	75	chr3	95980296	95980321	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-6.4156
chr2	179773473	179774102	protein_coding	Psma7	exon	ENSMUSG00000027566	ProperStrand	45	chr2	26494708	26494731	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.6333
chr10	6366158	6367825	protein_coding	Mthfd1l	exon	ENSMUSG00000040675	ProperStrand	50	chr3	108357297	108357387	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-4.8910
chr9	30968894	30969377	protein_coding	Aplp2	exon	ENSMUSG00000031996	ProperStrand	172	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-4.9200
chr7	29105072	29105127	protein_coding	Supt5h	exon	ENSMUSG00000003435	ProperStrand	123	chr9	15119646	15119736	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-2.7703
chr6	91689910	91689954	protein_coding	Slc6a6	exon	ENSMUSG00000030096	ProperStrand	206	chr5	101260409	101260432	snoRNA	ENSMUSG00000077354_SNORA42	.	ENSMUSG00000077354	ProperStrand	22	1	-12.8723
chr9	64333076	64333098	protein_coding	Megf11	intron	ENSMUSG00000036466	NonProperStrand	64	chr9	81949795	81949813	protein_coding	Mei4	intron	ENSMUSG00000043289	NonProperStrand	42	1	-13.9015
chr2	154171683	154171700	protein_coding	Cdk5rap1	exon	ENSMUSG00000027487	ProperStrand	75	chr3	96364608	96364662	protein_coding	Txnip	utr3	ENSMUSG00000038393	ProperStrand	172	1	-10.7514
chr11	68578560	68578610	protein_coding	Myh10	exon	ENSMUSG00000020900	ProperStrand	91	chr16	23111391	23111481	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.7425
chr9	96101488	96101532	protein_coding	Tfdp2	intron	ENSMUSG00000032411	ProperStrand	95	chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	1	-9.6963
chr2	168009123	168009225	protein_coding	Adnp	exon	ENSMUSG00000051149	ProperStrand	48	chr16	23111708	23111753	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.2671
chr6	146991382	146991398	protein_coding	Mrps35	exon	ENSMUSG00000040112	NonProperStrand	27	chr11	106362642	106362693	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-9.0094
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr8	113043417	113043434	protein_coding	Hydin	intron	ENSMUSG00000059854	ProperStrand	47	1	-9.4174
chr7	65814465	65814484	LTR	MTC	MaLR	chr7MTC65814181	NonProperStrand	1	chr10	23505193	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-inf
chr10	73411455	73411545	protein_coding	Pcdh15	intron	ENSMUSG00000052613	NonProperStrand	15	chr10	73453576	73453656	protein_coding	Pcdh15	intron	ENSMUSG00000052613	ProperStrand	33	1	-17.2887
chr4	53873623	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	chr9	15118516	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	1	-5.1285
chr12	20441580	20441680	Unknown	MurSatRep1	Unknown	chr12MurSatRep120441404	ProperStrand	2	chr17	35089182	35089236	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-12.9029
chr4	134479844	134479860	protein_coding	D4Wsu53e	exon	ENSMUSG00000037266	NonProperStrand	50	chr12	103807883	103807905	protein_coding	Itpk1	utr3	ENSMUSG00000057963	ProperStrand	47	1	-14.1783
chr3	96218591	96218669	misc_RNA	Telomerase-vert	.	ENSMUSG00000064796	ProperStrand	443	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-4.2676
chr7	51781726	51781744	protein_coding	Spib	utr3	ENSMUSG00000008193	NonProperStrand	14	chr5	98614333	98614352	pseudogene	A730035I17Rik	.	ENSMUSG00000045238	ProperStrand	17	1	-20.0451
chr14	48149236	48149329	protein_coding	Fbxo34	exon	ENSMUSG00000037536	ProperStrand	11	chr16	23110907	23110938	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.6241
chr1	155540991	155541007	protein_coding	Rgs8	utr3	ENSMUSG00000042671	NonProperStrand	12	chr9	15119651	15119693	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.6882
chr8	81343929	81344949	protein_coding	Lsm6	utr5	ENSMUSG00000031683	ProperStrand	13	chr4	131908689	131908710	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.8088
chr4	136249673	136249690	protein_coding	Ephb2	exon	ENSMUSG00000028664	NonProperStrand	9	chr12	17552960	17553029	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-8.9189
chr12	82049848	82049885	protein_coding-noncoding	Srsf5	utr5	ENSMUSG00000021134	ProperStrand	10	chr11	69494204	69494277	protein_coding	Senp3	utr5	ENSMUSG00000005204	ProperStrand	65	1	-16.8256
chr1	162138513	162138603	protein_coding	Cacybp	exon	ENSMUSG00000014226	ProperStrand	39	chr7	117189944	117190024	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.1353
chr12	111989952	111989972	protein_coding	Wdr20a	intron	ENSMUSG00000037957	ProperStrand	2	chr11	69483196	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-9.6187
chr2	90235301	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr18	57327534	57327550	protein_coding	Megf10	intron	ENSMUSG00000024593	NonProperStrand	25	1	-6.1754
chr11	69163952	69164220	protein_coding	Chd3	intron	ENSMUSG00000018474	ProperStrand	438	chr11	69164008	69164173	snoRNA	ENSMUSG00000087881_SCARNA21	.	ENSMUSG00000087881	ProperStrand	261	248	-20.3090
chr3	33041923	33041939	protein_coding	Pex5l	utr5	ENSMUSG00000027674	ProperStrand	52	chr9	110843196	110843212	protein_coding	Tdgf1	utr3	ENSMUSG00000032494	ProperStrand	218	1	-11.0143
chr4	134926614	134927796	protein_coding	A330049M08Rik	exon	ENSMUSG00000043924	ProperStrand	130	chr7	17471039	17471120	protein_coding	Dact3	exon	ENSMUSG00000078794	ProperStrand	6	1	-16.4623
chr9	15119646	15119663	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	chr1	88248604	88248662	snoRNA	ENSMUSG00000064696_SNORD20	.	ENSMUSG00000064696	ProperStrand	89	2	-3.5703
chr12	71968931	71968948	protein_coding	Frmd6	intron	ENSMUSG00000048285	ProperStrand	23	chr18	35716830	35716874	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.8840
chr1	162968059	162968090	non_coding	Gas5	.	ENSMUSG00000053332	ProperStrand	144	chr14	70540739	70540755	protein_coding	2610301G19Rik	exon	ENSMUSG00000033712	ProperStrand	49	1	-11.9644
chr15	37698496	37698513	protein_coding	Ncald	intron	ENSMUSG00000051359	NonProperStrand	12	chr10	23505256	23505283	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.9771
chr11	106271975	106271994	protein_coding	Ern1	intron	ENSMUSG00000020715	NonProperStrand	4	chr3	123210854	123210933	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-7.3786
chr12	110887368	110887435	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr13	13578931	13578948	protein_coding	Nid1	exon	ENSMUSG00000005397	ProperStrand	112	2	-11.8908
chrX	71533839	71534003	protein_coding	Taz	exon	ENSMUSG00000009995	ProperStrand	59	chr11	48617678	48617703	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	1	-9.8311
chr1	152233219	152233238	protein_coding	BC003331	intron	ENSMUSG00000006010	ProperStrand	5	chr12	109433395	109433831	protein_coding	Ccnk	exon	ENSMUSG00000021258	ProperStrand	31	1	-18.4153
chr5	32445506	32445524	protein_coding	Fosl2	intron	ENSMUSG00000029135	NonProperStrand	4	chr7	52715051	52715106	protein_coding	Ftl1	utr5	ENSMUSG00000050708	ProperStrand	807	1	-13.7874
chr19	3714467	3714537	protein_coding	1810055G02Rik	utr5	ENSMUSG00000035372	ProperStrand	5	chr4	131865930	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-6.5022
chr4	147988651	147988668	protein_coding	Tardbp	utr3	ENSMUSG00000041459	ProperStrand	120	chr1	88247800	88247876	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	2	-6.3752
chr18	10052128	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr6	38509888	38509963	protein_coding	Luc7l2	intron	ENSMUSG00000029823	ProperStrand	85	2	-12.9214
chr17	64902740	64902758	protein_coding	AU016765	intron	ENSMUSG00000073377	ProperStrand	9	chr17	35089181	35089228	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-9.3268
chr1	168083363	168083380	protein_coding	Gpa33	intron	ENSMUSG00000000544	ProperStrand	33	chr8	83509216	83509279	protein_coding	Usp38	exon	ENSMUSG00000038250	ProperStrand	26	1	-16.1824
chr13	55449328	55449388	protein_coding	Lman2	intron	ENSMUSG00000021484	ProperStrand	26	chr19	8798773	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-6.4454
chr15	33958230	33958310	LTR	RodERV21-int	ERV1	chr15RodERV21-int33957949	ProperStrand	1	chr5	21121810	21121900	protein_coding	Fbxl13	intron	ENSMUSG00000048520	NonProperStrand	1	1	-inf
chrX	152009278	152009294	protein_coding	Ptchd1	exon	ENSMUSG00000041552	NonProperStrand	294	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-2.2956
chr18	42805538	42805554	protein_coding	Ppp2r2b	exon	ENSMUSG00000024500	NonProperStrand	95	chr4	79648849	79648894	pseudogene	Gm11407	.	ENSMUSG00000082179	ProperStrand	26	1	-14.0850
chr10	67697065	67697082	protein_coding	Arid5b	intron	ENSMUSG00000019947	NonProperStrand	14	chr2	29268969	29269029	protein_coding	Med27	exon	ENSMUSG00000026799	ProperStrand	7	1	-inf
chr6	124655041	124655060	protein_coding	Emg1	exon	ENSMUSG00000004268	ProperStrand	12	chr16	23110941	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.4686
chr17	56210923	56210963	protein_coding-noncoding	Ubxn6	utr3	ENSMUSG00000019578	NonProperStrand	4	chr3	108357378	108357478	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-10.1312
chr1	90598740	90598757	protein_coding	Arl4c	utr5	ENSMUSG00000049866	ProperStrand	25	chr4	131865891	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.2649
chr17	63961186	63961276	LINE	L1Md_T	L1	chr17L1Md_T63961117	ProperStrand	1	chr1	12658089	12658179	lincRNA	Gm17644	exon	ENSMUSG00000066918	NonProperStrand	37	1	-inf
chr1	52707366	52707444	protein_coding	Tmem194b	utr3	ENSMUSG00000043015	ProperStrand	4	chr11	69481388	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-8.6916
chr17	27340792	27340883	protein_coding	Lemd2	exon	ENSMUSG00000044857	ProperStrand	10	chr9	64023677	64023746	snoRNA	ENSMUSG00000064918_SNORD18	.	ENSMUSG00000064918	ProperStrand	370	1	-13.3324
chr6	35304460	35304477	DNA	MER5A	MER1_type	chr6MER5A35304302	ProperStrand	12	chr4	131908244	131908299	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.2270
chr16	89738138	89738154	LTR	LTR16C	ERVL	chr16LTR16C89737840	NonProperStrand	12	chr18	36700414	36700431	protein_coding	Slc4a9	exon	ENSMUSG00000024485	ProperStrand	13	1	-19.4752
chr16	94720247	94720271	protein_coding	Dscr3	utr3	ENSMUSG00000022898	ProperStrand	8	chr2	26493363	26493420	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-7.7535
chr3	135523711	135523728	protein_coding	Slc39a8	intron	ENSMUSG00000053897	NonProperStrand	19	chr5	108336431	108336490	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-7.1594
chr10	79173629	79174261	protein_coding	Bsg	exon	ENSMUSG00000023175	ProperStrand	107	chr19	8798767	8798802	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-3.7062
chr5	23031348	23031364	protein_coding	Srpk2	exon	ENSMUSG00000062604	ProperStrand	51	chr10	23505152	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-4.3338
chr1	43386726	43386743	LTR	MTD	MaLR	chr1MTD43386515	ProperStrand	1	chr5	130300419	130300464	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-inf
chrX	133275186	133275286	protein_coding	Morf4l2	intron	ENSMUSG00000031422	ProperStrand	113	chr5	130295510	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-4.0367
chr6	46316487	46316503	protein_coding	Cntnap2	intron	ENSMUSG00000039419	NonProperStrand	283	chr16	32243847	32243943	snoRNA	ENSMUSG00000080440_SNORA79	.	ENSMUSG00000080440	ProperStrand	140	1	-8.5078
chr16	11144303	11144403	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr4	131866154	131866236	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	NonProperStrand	19	2	-20.3239
chr8	4628182	4628231	protein_coding	Zfp958	exon	ENSMUSG00000058748	ProperStrand	1	chr19	8800377	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-inf
chr13	43233302	43233318	protein_coding	Phactr1	utr3	ENSMUSG00000054728	NonProperStrand	10	chr19	8800377	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-7.0560
chr11	117729369	117729386	protein_coding	Tha1	utr3	ENSMUSG00000017713	NonProperStrand	56	chr2	32818803	32818941	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-5.6057
chr11	102551295	102551385	protein_coding-noncoding	Ccdc43	utr3	ENSMUSG00000020925	ProperStrand	1	chr11	102551544	102551624	protein_coding	Ccdc43	exon	ENSMUSG00000020925	ProperStrand	26	1	-inf
chr16	75761550	75765200	protein_coding	Hspa13	exon	ENSMUSG00000032932	NonProperStrand	57	chr10	110918561	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-3.5431
chr6	113065054	113065585	protein_coding	Setd5	exon	ENSMUSG00000034269	ProperStrand	162	chr5	130300424	130300529	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-1.9909
chr8	87409997	87410015	protein_coding	Syce2	exon	ENSMUSG00000003824	ProperStrand	8	chr9	15119287	15119397	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	3	-19.2623
chr11	57873543	57873580	protein_coding	Larp1	utr3	ENSMUSG00000037331	ProperStrand	201	chr7	52713408	52713485	protein_coding	Ftl1	utr3	ENSMUSG00000050708	ProperStrand	807	3	-13.2225
chr1	17702565	17702593	lincRNA	Gm16070	exon	ENSMUSG00000085125	ProperStrand	2	chr7	52382014	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-14.1622
chr4	43505804	43505894	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr3	87951416	87951434	protein_coding	Mef2d	intron	ENSMUSG00000001419	NonProperStrand	2	2	-inf
chr8	73059024	73059049	protein_coding	Fkbp8	utr3	ENSMUSG00000019428	ProperStrand	52	chr18	35716830	35716872	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-4.2728
chr6	30052223	30052267	protein_coding	Nrf1	exon	ENSMUSG00000058440	ProperStrand	22	chr17	35299528	35299599	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-6.7562
chr17	47630108	47630134	protein_coding	Taf8	intron	ENSMUSG00000023980	ProperStrand	25	chr15	94602149	94602167	protein_coding	Tmem117	intron	ENSMUSG00000063296	NonProperStrand	31	1	-16.3762
chr2	144091711	144091811	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	ProperStrand	549	chr10	110918547	110918590	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	6	-4.1898
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr12	103192804	103192826	protein_coding	Atxn3	intron	ENSMUSG00000021189	NonProperStrand	4	1	-10.0500
chr1	173938676	173938738	protein_coding	Vangl2	exon	ENSMUSG00000026556	ProperStrand	37	chr11	62418042	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-6.5114
chr5	14932405	14932485	LINE	L1_Mus4	L1	chr5L1_Mus414932137	NonProperStrand	1	chr9	65619792	65619882	protein_coding	Zfp609	intron	ENSMUSG00000040524	ProperStrand	87	1	-inf
chr12	88912985	88913005	protein_coding	Gm2022	intron	ENSMUSG00000071217	NonProperStrand	57	chr9	15118321	15118360	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.5611
chr2	25915656	25915672	protein_coding	Nacc2	exon	ENSMUSG00000026932	ProperStrand	98	chr4	137125477	137125555	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	1	-7.1272
chr9	40612830	40612855	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	chr5	111121066	111121109	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-2.8681
chr9	47091684	47091702	LINE	L4	RTE	chr9L447091685	NonProperStrand	1	chr4	131908365	131908443	lincRNA	Gm17300	exon	ENSMUSG00000091021	ProperStrand	109	1	-inf
chr17	7435796	7435835	protein_coding	Rps6ka2	intron	ENSMUSG00000023809	ProperStrand	47	chr5	143732339	143733649	protein_coding	Fscn1	exon	ENSMUSG00000029581	ProperStrand	200	1	-11.3908
chr4	136101981	136101997	protein_coding	Luzp1	utr3	ENSMUSG00000001089	NonProperStrand	47	chr19	8798484	8798517	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-5.6890
chr4	132530097	132530117	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	chr8	98269965	98270083	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-2.1406
chr11	77996559	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	chr8	113366285	113366320	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	3	-6.0377
chr9	15119636	15119726	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	chr8	113447079	113447159	snoRNA	ENSMUSG00000065100_SNORA57	.	ENSMUSG00000065100	ProperStrand	81	10	-19.9331
chr9	94633892	94633908	protein_coding	Slc9a9	intron	ENSMUSG00000031129	NonProperStrand	7	chr4	118146758	118146909	protein_coding	Tie1	exon	ENSMUSG00000033191	ProperStrand	1	1	-inf
chr5	121656687	121656777	protein_coding	Rpl6	exon	ENSMUSG00000029614	ProperStrand	332	chr5	74489579	74489659	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-0.9991
chr7	4656761	4656804	protein_coding	Brsk1	exon	ENSMUSG00000035390	ProperStrand	12	chr11	97642952	97643007	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-5.5085
chr13	100899247	100899264	protein_coding	Smn1	intron	ENSMUSG00000021645	ProperStrand	22	chr5	116013317	116013376	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	1	-12.1811
chr17	42640956	42640975	protein_coding	3110082D06Rik	utr3	ENSMUSG00000042256	NonProperStrand	3	chr16	23110508	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-inf
chr10	80641693	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	chr11	55296285	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-1.0994
chr7	106036827	106036874	protein_coding	Uvrag	exon	ENSMUSG00000035354	ProperStrand	13	chr4	131865413	131865503	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-7.0177
chr10	76727751	76728600	protein_coding	Pofut2	exon	ENSMUSG00000020260	ProperStrand	4	chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	1	-14.9592
chrX	7472962	7473124	protein_coding	Pqbp1	exon	ENSMUSG00000031157	ProperStrand	22	chr11	97642957	97643047	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.3090
chr13	23836956	23837046	protein_coding	Hist1h3c	exon	ENSMUSG00000069310	ProperStrand	26	chr16	23111375	23111455	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.5788
chr11	77696262	77696644	protein_coding	Pipox	exon	ENSMUSG00000017453	ProperStrand	11	chr1	66741087	66741103	protein_coding	Unc80	exon	ENSMUSG00000055567	NonProperStrand	212	1	-14.2452
chr11	50193908	50193988	protein_coding-noncoding	Hnrnph1	utr5	ENSMUSG00000007850	ProperStrand	13	chr14	33005161	33005198	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-7.0085
chr18	4546052	4546142	SINE	B1_Mus1	Alu	chr18B1_Mus14546028	ProperStrand	1	chr18	4545877	4545957	SINE	B3	B2	chr18B34545761	NonProperStrand	1	1	-inf
chr5	115795691	115795779	protein_coding	Cox6a1	utr3	ENSMUSG00000041697	ProperStrand	38	chr16	23110970	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.7634
chr17	35088946	35089019	processed_transcript	1110038B12Rik	.	ENSMUSG00000092203	ProperStrand	126	chr9	15119673	15119763	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.4418
chr5	65788878	65788906	protein_coding	Lias	exon	ENSMUSG00000029199	ProperStrand	9	chr8	13416896	13416912	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-10.3167
chr7	116663731	116663773	protein_coding-noncoding	Rpl27a	utr5	ENSMUSG00000046364	ProperStrand	57	chr9	120039533	120039622	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.4124
chr12	17552940	17552964	protein_coding	Odc1	intron	ENSMUSG00000011179	ProperStrand	173	chr2	152064492	152064535	protein_coding	Csnk2a1	intron	ENSMUSG00000074698	ProperStrand	91	2	-16.2995
chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	chr15	82980133	82980189	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-2.9996
chr10	12642400	12642424	lincRNA	B230208H11Rik	exon	ENSMUSG00000085233	ProperStrand	21	chr15	102239562	102239633	protein_coding	Sp1	exon	ENSMUSG00000001280	ProperStrand	124	1	-13.9858
chr19	4923745	4923773	protein_coding	Dpp3	exon	ENSMUSG00000063904	ProperStrand	36	chr16	23111706	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.7618
chr15	103129341	103129422	protein_coding	Copz1	utr3	ENSMUSG00000060992	ProperStrand	45	chr13	96100580	96100670	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	8	-21.1058
chr16	20637868	20637885	protein_coding	Ece2	exon	ENSMUSG00000022842	ProperStrand	25	chr3	121157984	121160034	protein_coding	Cnn3	exon	ENSMUSG00000053931	ProperStrand	77	1	-14.5890
chr5	124699288	124699304	protein_coding	Pitpnm2	intron	ENSMUSG00000029406	NonProperStrand	15	chr5	122233963	122234016	protein_coding	Atxn2	exon	ENSMUSG00000042605	ProperStrand	83	1	-15.4865
chr14	54403746	54403826	LINE	L1_Mm	L1	chr14L1_Mm54403700	NonProperStrand	1	chr14	54403944	54404034	LINE	Lx9	L1	chr14Lx954403925	ProperStrand	1	1	-inf
chr10	66483553	66483573	protein_coding	Reep3	intron	ENSMUSG00000019873	ProperStrand	11	chr9	120038612	120038674	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	3	-14.8246
chr7	146041953	146042029	protein_coding	Ppp2r2d	intron	ENSMUSG00000041769	ProperStrand	62	chr8	13876097	13876187	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-7.0785
chr4	130305550	130305623	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	chr16	23111691	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	6	-2.4846
chr16	85802546	85802564	protein_coding	Adamts1	exon	ENSMUSG00000022893	ProperStrand	102	chr15	57978261	57978299	snoRNA	ENSMUSG00000080461_SNORA11	.	ENSMUSG00000080461	ProperStrand	171	2	-15.9467
chr18	34525119	34525219	protein_coding	Reep5	intron	ENSMUSG00000005873	ProperStrand	19	chr5	74489641	74489670	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-6.0104
chr19	7289806	7289857	protein_coding	Cox8a	utr3	ENSMUSG00000035885	ProperStrand	32	chr10	23505152	23505215	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.1928
chr1	188569475	188569499	protein_coding	Rrp15	intron	ENSMUSG00000001305	ProperStrand	16	chr9	64024492	64024567	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	7	-19.1332
chr6	121423179	121423195	protein_coding	Iqsec3	utr5	ENSMUSG00000040797	NonProperStrand	139	chr16	23111689	23111734	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-0.7550
chr4	122968651	122968720	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	chr4	56910541	56910629	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	5	-3.4312
chr11	55296215	55296333	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	chr8	73419655	73419757	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	14	-1.5258
chr17	25996060	25996076	protein_coding	Wdr90	exon	ENSMUSG00000073434	ProperStrand	91	chr11	69481433	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-2.4680
chr12	49650318	49650336	LINE	Lx3C	L1	chr12Lx3C49649537	ProperStrand	1	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-inf
chr1	180885279	180885295	protein_coding	Smyd3	utr3	ENSMUSG00000055067	NonProperStrand	190	chr16	23110454	23110566	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-0.7860
chr7	26472435	26472451	protein_coding	Tgfb1	utr5	ENSMUSG00000002603	NonProperStrand	154	chr8	108233712	108233729	protein_coding	4933405L10Rik	exon	ENSMUSG00000013158	ProperStrand	94	1	-10.5195
chr11	77996362	77996395	protein_coding	Rpl23a	exon	ENSMUSG00000058546	ProperStrand	121	chr8	73419656	73419756	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-1.9344
chr6	113103127	113103150	protein_coding	Setd5	utr3	ENSMUSG00000034269	ProperStrand	162	chr7	116664816	116664924	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-2.0399
chr9	56773800	56773890	protein_coding	Snx33	exon	ENSMUSG00000032733	ProperStrand	4	chr17	26204543	26204623	protein_coding	Rab11fip3	exon	ENSMUSG00000037098	ProperStrand	32	1	-19.2592
chr7	107503777	107520236	protein_coding	Ppme1	exon	ENSMUSG00000030718	ProperStrand	38	chr17	35089182	35089237	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-6.3855
chr19	46722028	46722049	protein_coding	D19Wsu162e	intron	ENSMUSG00000047731	ProperStrand	16	chr16	23111445	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-5.9711
chr6	48410411	48410428	protein_coding	Sspo	exon	ENSMUSG00000029797	NonProperStrand	94	chr19	8798483	8798529	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-7.2485
chr14	57312831	57312888	protein_coding	Mphosph8	intron	ENSMUSG00000079184	NonProperStrand	27	chr17	35087895	35087960	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-6.7781
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr7	19941801	19941818	protein_coding	Ercc1	exon	ENSMUSG00000003549	NonProperStrand	35	1	-6.9727
chr2	90235313	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	193730797	193730813	protein_coding	Slc30a1	utr5	ENSMUSG00000037434	ProperStrand	42	1	-5.1514
chr3	90082238	90082255	protein_coding	Dennd4b	exon	ENSMUSG00000042404	ProperStrand	13	chrX	71517906	71517956	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-9.6389
chr6	38556161	38556255	protein_coding	Luc7l2	utr3	ENSMUSG00000029823	ProperStrand	85	chr5	108334194	108334256	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-4.1550
chr1	58026438	58026455	protein_coding	Kctd18	intron	ENSMUSG00000054770	ProperStrand	7	chr2	144091855	144091917	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	ProperStrand	549	1	-13.3072
chr11	97641535	97641588	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	chr1	173041632	173041649	tRNA	tRNA710-ValCAC	.	497914	ProperStrand	206	1	-5.4233
chr19	45126942	45128167	protein_coding	Sfxn3	exon	ENSMUSG00000025212	NonProperStrand	22	chr15	79908930	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-7.4689
chr8	77742558	77742574	protein_coding	Rasd2	exon	ENSMUSG00000034472	NonProperStrand	237	chr5	130295414	130295469	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-2.6942
chr11	69480945	69480987	protein_coding	Eif4a1	utr3	ENSMUSG00000059796	ProperStrand	108	chr15	79913288	79913311	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.5422
chr10	20080843	20080859	protein_coding	Fam54a	utr3	ENSMUSG00000019992	ProperStrand	232	chr18	60991304	60991538	protein_coding	Tcof1	exon	ENSMUSG00000024613	ProperStrand	68	1	-10.3497
chr5	3693225	3693242	protein_coding	Ankib1	exon	ENSMUSG00000040351	NonProperStrand	98	chr12	17552949	17553030	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-4.1499
chr7	108971290	108971306	protein_coding	Inppl1	utr3	ENSMUSG00000032737	ProperStrand	272	chr5	54389948	54389964	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	1	-7.7611
chrX	19683228	19683244	protein_coding	Slc9a7	exon	ENSMUSG00000037341	NonProperStrand	136	chr19	8963027	8963081	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.0534
chr2	69714752	69714786	protein_coding	Mettl5	intron	ENSMUSG00000051730	ProperStrand	2	chr4	131908809	131908885	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-8.0336
chr5	54389950	54389966	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	chr5	108334237	108334323	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-2.5036
chr11	17100157	17100179	protein_coding	Ppp3r1	utr3	ENSMUSG00000033953	ProperStrand	10	chr4	131908689	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-7.3579
chr16	31814295	31814375	protein_coding	Dlg1	intron	ENSMUSG00000022770	ProperStrand	69	chr19	53702598	53703202	protein_coding	Smc3	exon	ENSMUSG00000024974	ProperStrand	61	1	-12.9998
chr4	132606096	132606119	protein_coding	Ahdc1	intron	ENSMUSG00000037692	ProperStrand	100	chr2	145077954	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-6.7084
chr11	80244325	80244405	protein_coding	Psmd11	intron	ENSMUSG00000017428	NonProperStrand	2	chr11	80777759	80777849	protein_coding	Accn1	intron	ENSMUSG00000020704	ProperStrand	69	1	-inf
chr6	91705037	91705091	protein_coding	Slc6a6	utr3	ENSMUSG00000030096	ProperStrand	206	chr7	112629988	112630005	protein_coding	Prkcdbp	intron	ENSMUSG00000037060	NonProperStrand	43	1	-11.5114
chr14	78912444	78912490	protein_coding	Akap11	exon	ENSMUSG00000022016	ProperStrand	44	chr9	55266359	55266376	protein_coding	AI118078	intron	ENSMUSG00000032313	ProperStrand	5	1	-18.7669
chr2	3915337	3915427	LTR	MTB_Mm-int	MaLR	chr2MTB_Mm-int3915258	ProperStrand	1	chr2	3915144	3915224	LTR	MTB_Mm	MaLR	chr2MTB_Mm3914929	ProperStrand	1	1	-inf
chr4	49543841	49543857	protein_coding	Zfp189	utr3	ENSMUSG00000039634	ProperStrand	18	chr8	73124357	73124375	protein_coding	Ssbp4	exon	ENSMUSG00000070003	ProperStrand	39	1	-16.5649
chr9	110842493	110842542	protein_coding	Tdgf1	utr3	ENSMUSG00000032494	ProperStrand	218	chr7	127978978	127979042	tRNA	tRNA861-LeuTAG	.	1332912	ProperStrand	49	1	-11.1343
chr4	134026073	134026138	protein_coding	Stmn1	utr5	ENSMUSG00000028832	ProperStrand	54	chr18	35716706	35716796	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.3452
chr7	52400925	52401093	protein_coding	Aldh16a1	exon	ENSMUSG00000007833	ProperStrand	27	chr4	131866155	131866235	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-5.1937
chrX	149828130	149828146	protein_coding	Klf8	utr3	ENSMUSG00000041649	NonProperStrand	107	chr11	6428142	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.1891
chr6	113765841	113765857	protein_coding	Atp2b2	intron	ENSMUSG00000030302	NonProperStrand	14	chr4	130131500	130131521	protein_coding	Nkain1	intron	ENSMUSG00000078532	ProperStrand	45	1	-16.9247
chr17	35971242	35971914	protein_coding	Tubb5	utr3	ENSMUSG00000001525	ProperStrand	624	chr7	148634738	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	3	-1.7568
chrX	54644639	54644699	snoRNA	ENSMUSG00000065110_Snord61	.	ENSMUSG00000065110	ProperStrand	40	chr2	26494708	26494766	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	3	-9.4823
chr14	70196628	70196645	protein_coding	Rhobtb2	exon	ENSMUSG00000022075	ProperStrand	22	chr15	52956686	52956707	protein_coding	Ext1	intron	ENSMUSG00000061731	ProperStrand	24	1	-17.1497
chr11	29144103	29147245	protein_coding	Ccdc104	utr5	ENSMUSG00000020462	ProperStrand	20	chr4	131865853	131865953	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-12.4569
chr7	150474036	150474068	protein_coding	Kcnq1	intron	ENSMUSG00000009545	NonProperStrand	133	chr7	51505232	51505308	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	1	-6.5699
chr8	26879777	26879793	protein_coding	Gm17484	utr3	ENSMUSG00000091514	ProperStrand	68	chr6	71832629	71832687	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-5.3665
chr1	36419943	36419986	protein_coding	4632411B12Rik	intron	ENSMUSG00000010453	ProperStrand	24	chr17	35299507	35299588	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-6.5813
chr16	20716379	20716425	protein_coding-noncoding	Clcn2	utr5	ENSMUSG00000022843	ProperStrand	2	chr16	20717004	20717097	protein_coding	Clcn2	intron	ENSMUSG00000022843	ProperStrand	7	2	-inf
chr11	3256157	3256194	protein_coding	Limk2	intron	ENSMUSG00000020451	ProperStrand	100	chr10	23505190	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-2.2527
chr14	97655340	97655430	LINE	L1_Mus1	L1	chr14L1_Mus197655240	ProperStrand	1	chr2	139716307	139716397	protein_coding	Tasp1	intron	ENSMUSG00000039033	NonProperStrand	7	1	-inf
chr9	20600289	20600403	protein_coding	Col5a3	exon	ENSMUSG00000004098	NonProperStrand	14	chr11	77995188	77995238	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-9.1169
chr5	140917060	140917755	protein_coding	Eif3b	exon	ENSMUSG00000056076	ProperStrand	66	chr8	129468790	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-4.2324
chr11	29059401	29061402	protein_coding	Pnpt1	exon	ENSMUSG00000020464	ProperStrand	17	chr1	63225693	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	7	-inf
chr3	96528208	96528274	snoRNA	ENSMUSG00000065669_SNORA5	.	ENSMUSG00000065669	ProperStrand	180	chr11	116938555	116938636	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-4.0390
chr5	125783465	125783504	protein_coding	Scarb1	exon	ENSMUSG00000037936	ProperStrand	18	chr18	35102297	35102339	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-9.0132
chr17	28804759	28804784	protein_coding	Slc26a8	intron	ENSMUSG00000036196	ProperStrand	1	chr5	29990099	29990129	protein_coding	Ube3c	exon	ENSMUSG00000039000	ProperStrand	48	1	-inf
chr2	26493418	26493522	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr7	116664806	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	16	-0.7386
chr16	98284311	98284354	LINE	L1_Mus1	L1	chr16L1_Mus198283327	NonProperStrand	3	chr11	97642952	97642978	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-8.5513
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr4	151424776	151425917	protein_coding	Nol9	exon	ENSMUSG00000028948	ProperStrand	93	3	-12.8046
chr6	47497407	47501782	protein_coding	Ezh2	exon	ENSMUSG00000029687	ProperStrand	40	chr4	131908359	131908453	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	22	-inf
chr1	177818969	177818985	protein_coding	Exo1	exon	ENSMUSG00000039748	NonProperStrand	11	chr8	129468767	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	5	-20.3267
chr7	28441968	28442903	protein_coding	Map3k10	exon	ENSMUSG00000040390	ProperStrand	14	chr15	34370545	34370623	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	4	-inf
chr13	9833552	9833672	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr9	22177763	22179382	protein_coding	Anln	exon	ENSMUSG00000036777	ProperStrand	133	3	-8.5830
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr19	9047073	9047394	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	1	-4.2191
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr7	142907876	142907927	protein_coding	Mki67	utr5	ENSMUSG00000031004	ProperStrand	286	1	-3.3814
chr12	86561128	86562470	protein_coding	Eif2b2	exon	ENSMUSG00000004788	ProperStrand	15	chr17	57074756	57074773	protein_coding	Mllt1	utr5	ENSMUSG00000024212	ProperStrand	19	1	-18.9281
chr12	103983429	103983461	protein_coding	D230037D09Rik	utr3	ENSMUSG00000046675	ProperStrand	4	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-16.6323
chrX	143948158	143948174	protein_coding	Lrch2	intron	ENSMUSG00000031290	NonProperStrand	2	chr11	6428089	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-10.4671
chr7	17600780	17600836	protein_coding	Ppp5c	exon	ENSMUSG00000003099	ProperStrand	9	chr6	121423179	121423195	protein_coding	Iqsec3	utr5	ENSMUSG00000040797	NonProperStrand	139	1	-15.5039
chr3	27022862	27025846	protein_coding	Ect2	exon	ENSMUSG00000027699	ProperStrand	17	chr7	52382753	52382833	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	2	-14.7762
chr8	119440021	119440039	protein_coding	2310061C15Rik	intron	ENSMUSG00000014633	ProperStrand	6	chr18	73693113	73693134	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-10.2391
chr4	148554572	148554612	protein_coding	Kif1b	utr3	ENSMUSG00000063077	ProperStrand	60	chr9	120038553	120038643	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.0390
chr17	73941739	73941756	protein_coding	Galnt14	intron	ENSMUSG00000024064	NonProperStrand	5	chr1	145500940	145500965	protein_coding	Cdc73	intron	ENSMUSG00000026361	ProperStrand	22	1	-19.2349
chr11	109238670	109238755	protein_coding	Gna13	intron	ENSMUSG00000020611	ProperStrand	23	chr8	11209636	11210763	protein_coding	Col4a1	exon	ENSMUSG00000031502	NonProperStrand	10	1	-18.7819
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr8	98263760	98264630	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	1	-4.7193
chr2	90235293	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	145564547	145564563	protein_coding	Tuba3b	utr5	ENSMUSG00000067338	ProperStrand	152	1	-2.7544
chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	chr12	88778631	88778723	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-4.0377
chr3	85942755	85942780	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	chr10	110918548	110918638	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-0.6963
chr15	73586129	73586155	protein_coding	Ptp4a3	intron	ENSMUSG00000059895	NonProperStrand	6	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-7.8657
chrX	98613387	98613477	protein_coding	Zmym3	intron	ENSMUSG00000031310	ProperStrand	17	chr10	23505166	23505246	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.3129
chr13	58277809	58278517	protein_coding	Ubqln1	utr3	ENSMUSG00000005312	ProperStrand	49	chr10	23505152	23505272	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	6	-10.5572
chr10	79692850	79695060	protein_coding	Mum1	exon	ENSMUSG00000020156	ProperStrand	19	chr13	21351677	21351710	tRNA	tRNA71-AlaAGC	.	948265	ProperStrand	13	1	-18.8140
chr18	35804100	35804180	SINE	B2_Mm2	B2	chr18B2_Mm235804120	ProperStrand	1	chr18	35804411	35804501	Simple_repeat	(GA)n	Simple_repeat	chr18(GA)n35804432	ProperStrand	1	1	-inf
chr4	131908410	131908461	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr5	150025157	150025173	protein_coding	Uspl1	exon	ENSMUSG00000041264	NonProperStrand	33	1	-8.4576
chr19	4153917	4153974	protein_coding	Coro1b	utr3	ENSMUSG00000024835	ProperStrand	13	chr17	24857743	24857833	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-5.1456
chr19	4615542	4615559	protein_coding	Lrfn4	utr5	ENSMUSG00000045045	ProperStrand	19	chr9	120038467	120038529	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.2199
chr17	35972332	35972365	protein_coding	Tubb5	exon	ENSMUSG00000001525	ProperStrand	624	chr1	63225577	63225667	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-2.2850
chr17	36060289	36060311	protein_coding	Ppp1r10	exon	ENSMUSG00000039220	ProperStrand	45	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-8.3034
chr6	85628554	85628634	protein_coding	Alms1	exon	ENSMUSG00000063810	ProperStrand	37	chr6	85677631	85677721	pseudogene	Alms1-ps1	.	ENSMUSG00000090256	ProperStrand	1	1	-inf
chr11	69266813	69266829	protein_coding	Dnahc2	exon	ENSMUSG00000005237	ProperStrand	95	chr8	77633699	77633716	protein_coding	Mcm5	exon	ENSMUSG00000005410	ProperStrand	199	1	-9.9855
chr12	110892871	110892907	snoRNA	ENSMUSG00000064621_AF357355	.	ENSMUSG00000064621	ProperStrand	60	chr4	131866243	131866286	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-3.6651
chr10	7675760	7675777	protein_coding	Tab2	utr5	ENSMUSG00000015755	NonProperStrand	9	chr16	23111692	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.4225
chr5	121655830	121658413	protein_coding	Rpl6	exon	ENSMUSG00000029614	ProperStrand	332	chr4	131908236	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	5	-0.8682
chr15	81481285	81481358	protein_coding	Ep300	exon	ENSMUSG00000055024	ProperStrand	118	chr7	150717326	150717416	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-4.2054
chr11	109119982	109120009	protein_coding	Rgs9	exon	ENSMUSG00000020599	ProperStrand	18	chr9	15119968	15120008	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-9.6835
chr5	3816246	3816309	protein_coding	Krit1	intron	ENSMUSG00000000600	ProperStrand	27	chrX	103389837	103389980	protein_coding	Pgk1	exon	ENSMUSG00000062070	ProperStrand	484	3	-19.7414
chr6	38098088	38098105	protein_coding	D630045J12Rik	intron	ENSMUSG00000063455	NonProperStrand	13	chr2	26493441	26493496	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-6.7422
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr17	35975120	35975137	protein_coding	Tubb5	utr5	ENSMUSG00000001525	ProperStrand	624	1	-4.0271
chr10	57943231	57943359	protein_coding	Ranbp2	exon	ENSMUSG00000003226	ProperStrand	52	chr9	42236899	42236916	protein_coding	Tbcel	intron	ENSMUSG00000037287	NonProperStrand	4	2	-inf
chr14	112631964	112632054	LINE	Lx7	L1	chr14Lx7112631573	NonProperStrand	1	chr14	112632079	112632159	LTR	ORR1B1	MaLR	chr14ORR1B1112632059	NonProperStrand	1	1	-inf
chr18	71487780	71487796	protein_coding	Dcc	intron	ENSMUSG00000060534	NonProperStrand	29	chr5	108336363	108336409	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-6.3090
chr6	70794803	70794819	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chr1	162967507	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-1.8536
mmu-miR-1949	0	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr9	15119287	15119428	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	43	-19.9237
chr8	91538401	91538491	LINE	L2b	L2	chr8L2b91538410	ProperStrand	1	chr4	131908361	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-inf
chrX	71203608	71203642	protein_coding	Hcfc1	exon	ENSMUSG00000031386	ProperStrand	424	chr5	32361885	32361903	protein_coding	Bre	intron	ENSMUSG00000052139	NonProperStrand	13	1	-12.5126
chr18	58529618	58529708	LINE	L1Md_A	L1	chr18L1Md_A58525086	NonProperStrand	1	chr3	16480574	16480664	LINE	L1Md_A	L1	chr3L1Md_A16478316	NonProperStrand	1	1	-inf
chr17	56236693	56236770	protein_coding	Hdgfrp2	exon	ENSMUSG00000002833	ProperStrand	36	chr10	120709244	120712786	protein_coding	Tbc1d30	exon	ENSMUSG00000052302	ProperStrand	233	1	-11.6244
chr11	48615271	48615371	protein_coding-noncoding	Gnb2l1	utr5	ENSMUSG00000020372	ProperStrand	21	chr1	162967505	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-5.4889
chr3	145758124	145758143	protein_coding	Wdr63	intron	ENSMUSG00000043020	NonProperStrand	5	chrX	71517909	71517955	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-11.6878
chr1	162966201	162966249	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	chr9	64023246	64023329	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	1	-2.9156
chr17	35972560	35972609	protein_coding	Tubb5	exon	ENSMUSG00000001525	ProperStrand	624	chr11	48614367	48614434	snoRNA	ENSMUSG00000064500_SNORD95	.	ENSMUSG00000064500	ProperStrand	100	5	-inf
chrX	11635848	11635865	protein_coding	Bcor	exon	ENSMUSG00000040363	NonProperStrand	293	chr19	8799581	8799645	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-3.7073
chr10	89282078	89282321	protein_coding	Uhrf1bp1l	utr3	ENSMUSG00000019951	NonProperStrand	55	chr16	23110828	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-0.9304
chr5	89206421	89206438	protein_coding	Dck	intron	ENSMUSG00000029366	ProperStrand	12	chrX	131293758	131293830	protein_coding	Armcx3	exon	ENSMUSG00000049047	ProperStrand	4	1	-20.4237
chr11	116535967	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr6	131330344	131330410	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	ProperStrand	408	2	-4.1567
chr12	53022336	53022390	protein_coding	Heatr5a	exon	ENSMUSG00000035181	ProperStrand	21	chr19	8800083	8800138	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-9.7257
chr11	102116354	102116454	protein_coding	BC030867	exon	ENSMUSG00000034773	ProperStrand	10	chr1	162966007	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-7.1350
chr17	41093271	41095362	protein_coding	Mut	exon	ENSMUSG00000023921	ProperStrand	20	chr9	120038613	120038667	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.1184
chr12	93069138	93069197	protein_coding	Sel1l	exon	ENSMUSG00000020964	ProperStrand	27	chr4	131865855	131865920	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-5.4115
chr14	8777338	8777438	protein_coding	Flnb	intron	ENSMUSG00000025278	ProperStrand	124	chr2	26494708	26494765	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.8752
chr7	128306392	128306408	protein_coding	Otoa	exon	ENSMUSG00000034990	ProperStrand	2	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-16.4215
chr13	44964955	44965035	protein_coding	Jarid2	intron	ENSMUSG00000038518	ProperStrand	372	chr16	23111389	23111479	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	NonProperStrand	38	1	-10.5789
chrX	9436981	9436998	LTR	MTE2a-int	MaLR	chrXMTE2a-int9436854	ProperStrand	7	chr15	35866980	35867036	protein_coding	Cox6c	utr5	ENSMUSG00000014313	ProperStrand	10	1	-19.7613
chr11	3426352	3426368	protein_coding	Smtn	exon	ENSMUSG00000020439	ProperStrand	222	chr19	6058468	6058549	protein_coding	Fau	exon	ENSMUSG00000038274	ProperStrand	64	1	-10.5595
chr17	35818913	35819003	protein_coding	Ddr1	utr3	ENSMUSG00000003534	ProperStrand	129	chr15	78832734	78832814	protein_coding	Triobp	exon	ENSMUSG00000033088	ProperStrand	29	1	-13.2496
chr2	120872244	120872261	protein_coding	Tgm5	exon	ENSMUSG00000053675	NonProperStrand	163	chr7	148634700	148634775	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-2.2068
chr2	66137843	66140427	protein_coding	Scn1a	exon	ENSMUSG00000064329	ProperStrand	25	chr19	8799022	8799067	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-7.5768
chr2	27281841	27281857	protein_coding	Vav2	exon	ENSMUSG00000009621	NonProperStrand	31	chr2	26493379	26493469	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	3	-11.8688
chr12	103872732	103872787	protein_coding	Itpk1	intron	ENSMUSG00000057963	ProperStrand	47	chr3	88603786	88603865	pseudogene	5830417I10Rik	.	ENSMUSG00000078684	ProperStrand	68	1	-13.5571
chr19	5286837	5286927	protein_coding	Sf3b2	exon	ENSMUSG00000024853	ProperStrand	102	chr13	90238598	90238678	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	1	-7.5876
chr11	115940179	115940227	protein_coding	Wbp2	utr3	ENSMUSG00000034341	ProperStrand	39	chr1	162967529	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.2823
chrX	54644624	54644698	snoRNA	ENSMUSG00000065110_Snord61	.	ENSMUSG00000065110	ProperStrand	40	chr16	23110966	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.4886
chr4	43505725	43505826	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr5	144005771	144005788	protein_coding	Zfp12	exon	ENSMUSG00000029587	ProperStrand	5	1	-8.0398
chr17	32957268	32957284	lincRNA	Gm16684	intron	ENSMUSG00000085948	ProperStrand	43	chr6	88433094	88434462	protein_coding	Ruvbl1	exon	ENSMUSG00000030079	ProperStrand	24	1	-15.8760
chr9	62190836	62190852	protein_coding	Anp32a	intron	ENSMUSG00000032249	NonProperStrand	5	chr11	116938557	116938647	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	3	-20.1389
chr11	62418014	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	NonProperStrand	7	chr2	130101261	130101308	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	NonProperStrand	4	1	-inf
chr11	102294588	102294607	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr7	117166762	117166857	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	3	-3.3446
chr11	84722945	84722961	protein_coding	Myo19	exon	ENSMUSG00000020527	ProperStrand	82	chr12	84040062	84040078	protein_coding	Rgs6	intron	ENSMUSG00000021219	NonProperStrand	65	1	-12.5250
chr16	44158022	44159618	protein_coding	Naa50	exon	ENSMUSG00000022698	ProperStrand	56	chr19	8963086	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	20	-22.6058
chr4	134770621	134772119	protein_coding	Clic4	utr3	ENSMUSG00000037242	ProperStrand	84	chr9	15119709	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	14	-inf
chr2	31656213	31656277	protein_coding	Abl1	exon	ENSMUSG00000026842	ProperStrand	131	chrX	34589398	34589415	protein_coding	Sowahd	exon	ENSMUSG00000044400	ProperStrand	26	1	-13.4347
chr5	66034914	66035017	protein_coding	Pds5a	intron	ENSMUSG00000029202	ProperStrand	62	chr13	104902156	104902176	protein_coding	Sgtb	intron	ENSMUSG00000042743	ProperStrand	60	1	-13.2507
chr11	100581379	100581396	protein_coding	Rab5c	utr5	ENSMUSG00000019173	ProperStrand	76	chr7	125832332	125832411	protein_coding	Gde1	utr3	ENSMUSG00000033917	ProperStrand	2	1	-inf
chr4	125645828	125645918	LTR	MER21B	ERV1	chr4MER21B125645639	NonProperStrand	1	chr4	125645572	125645662	LTR	MLT1A0	MaLR	chr4MLT1A0125645294	ProperStrand	1	1	-inf
chr11	4820972	4820990	protein_coding	Thoc5	intron	ENSMUSG00000034274	ProperStrand	325	chr4	116827804	116827837	snoRNA	ENSMUSG00000064751_SNORD46	.	ENSMUSG00000064751	ProperStrand	132	1	-8.3498
chr2	179788948	179789031	protein_coding	Ss18l1	intron	ENSMUSG00000039086	ProperStrand	18	chr10	23505151	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	6	-18.1094
chr18	10052130	10052153	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr10	11063464	11063480	protein_coding	Epm2a	exon	ENSMUSG00000055493	ProperStrand	28	1	-10.3384
chrX	40944841	40944857	protein_coding	Gm362	exon	ENSMUSG00000078320	ProperStrand	129	chr9	120039623	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.9988
chr2	73747372	73747948	protein_coding	Atp5g3	exon	ENSMUSG00000018770	ProperStrand	41	chr7	117166734	117166814	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-5.5574
chr11	62690624	62690641	protein_coding	Trim16	utr3	ENSMUSG00000047821	NonProperStrand	5	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-12.8963
chr2	91768132	91768148	protein_coding	Chrm4	exon	ENSMUSG00000040495	NonProperStrand	55	chr16	23110528	23110564	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.6112
chr2	43538124	43538140	protein_coding	Kynu	utr3	ENSMUSG00000026866	NonProperStrand	8	chr7	117166747	117166794	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-8.8855
chr8	77554366	77554466	protein_coding	Hmgxb4	utr3	ENSMUSG00000034518	ProperStrand	25	chr15	79913288	79913353	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-5.2686
chr19	4801757	4801785	protein_coding	Rbm14	exon	ENSMUSG00000006456	ProperStrand	84	chr18	35716766	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-3.0360
chr2	118753964	118753980	protein_coding	Chst14	utr3	ENSMUSG00000074916	NonProperStrand	2	chr17	13112530	13112549	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-11.9614
chr11	64286351	64286369	protein_coding	Hs3st3a1	intron	ENSMUSG00000047759	NonProperStrand	12	chr8	72876877	72876933	protein_coding	Upf1	utr5	ENSMUSG00000058301	ProperStrand	90	2	-inf
chr8	13416897	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr11	43553226	43553243	protein_coding	Ttc1	exon	ENSMUSG00000041278	ProperStrand	13	1	-9.5462
chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-2.3249
chr6	65819202	65820348	protein_coding	Prdm5	exon	ENSMUSG00000029913	ProperStrand	50	chr13	14047046	14047064	protein_coding	B3galnt2	utr5	ENSMUSG00000039242	ProperStrand	6	1	-18.2322
chr6	120644499	120644562	protein_coding	Cecr2	intron	ENSMUSG00000071226	ProperStrand	39	chr10	90581049	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	2	-9.2399
chr7	150477774	150477805	protein_coding	Kcnq1	intron	ENSMUSG00000009545	NonProperStrand	133	chr3	55435951	55435967	protein_coding	Nbea	exon	ENSMUSG00000027799	NonProperStrand	115	1	-10.4089
chr19	56003755	56003771	protein_coding	Tcf7l2	intron	ENSMUSG00000024985	ProperStrand	103	chr15	79913295	79913344	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.6237
chr4	118799932	118799948	protein_coding	Slc2a1	intron	ENSMUSG00000028645	NonProperStrand	3	chr7	117166722	117166760	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-11.1118
chr2	162898463	162898487	protein_coding	Mybl2	exon	ENSMUSG00000017861	ProperStrand	230	chr8	112379350	112379541	protein_coding	Ap1g1	exon	ENSMUSG00000031731	ProperStrand	22	5	-21.3193
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	NonProperStrand	14	chr7	52387608	52387625	protein_coding	Flt3l	exon	ENSMUSG00000089989	ProperStrand	2	1	-inf
chr2	22445640	22445666	pseudogene	Gm13339	.	ENSMUSG00000082884	ProperStrand	24	chr3	123210853	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.6860
chr7	149170855	149171339	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	chr16	56035865	56036000	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	3	-15.5818
chr5	42136455	42136473	Low_complexity	GA-rich	Low_complexity	chr5GA-rich42136449	NonProperStrand	106	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	1	-5.9039
chr11	57938790	57938847	protein_coding	Gemin5	exon	ENSMUSG00000037275	ProperStrand	33	chrX	34622906	34622976	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-7.1821
chr10	117902308	117902325	LTR	ORR1E	MaLR	chr10ORR1E117902275	NonProperStrand	1	chr5	108334195	108334246	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-inf
chr15	99548653	99548669	protein_coding	Gpd1	exon	ENSMUSG00000023019	ProperStrand	40	chr17	35299535	35299563	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-5.5666
chr6	131660783	131660863	LINE	L1Md_F2	L1	chr6L1Md_F2131660285	NonProperStrand	1	chrX	100741489	100741579	LINE	L1Md_F2	L1	chrXL1Md_F2100741217	NonProperStrand	4	1	-inf
chr16	93873596	93873612	protein_coding	Morc3	exon	ENSMUSG00000039456	ProperStrand	24	chr14	76247711	76247842	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-5.9558
chr11	117677002	117677102	protein_coding	Tk1	utr3	ENSMUSG00000025574	ProperStrand	6	chr10	23505204	23505233	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-5.3874
chr1	93263062	93263081	protein_coding	Fam132b	exon	ENSMUSG00000047443	NonProperStrand	98	chr2	158182207	158182278	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	2	-6.8166
chr11	101068721	101069513	protein_coding	Ezh1	exon	ENSMUSG00000006920	ProperStrand	9	chr11	6428088	6428165	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-6.9084
chr1	89616480	89616580	protein_coding	Inpp5d	utr3	ENSMUSG00000026288	ProperStrand	75	chr19	17900101	17900117	snoRNA	ENSMUSG00000089540_snoU13	.	ENSMUSG00000089540	ProperStrand	99	1	-11.8588
chr19	5365947	5366613	protein_coding	Banf1	utr5	ENSMUSG00000024844	ProperStrand	34	chr10	23505152	23505237	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-8.0156
chr8	28370881	28370931	protein_coding	Eif4ebp1	exon	ENSMUSG00000031490	ProperStrand	22	chr7	24713726	24713742	protein_coding	Vmn1r179	exon	ENSMUSG00000046924	NonProperStrand	69	1	-15.0663
chr8	49480850	49480940	protein_coding	Odz3	exon	ENSMUSG00000031561	ProperStrand	56	chr4	131908714	131908794	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-2.5232
chr12	105935309	105938609	protein_coding	Dicer1	exon	ENSMUSG00000041415	ProperStrand	61	chr10	23505152	23505209	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.2108
chr2	179933202	179933254	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr11	62418014	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	2	-3.9737
chr5	137969950	137969968	protein_coding	Gnb2	exon	ENSMUSG00000029713	ProperStrand	23	chr16	23110840	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.7108
chr10	12341172	12353751	protein_coding	Utrn	exon	ENSMUSG00000019820	ProperStrand	69	chr18	79227387	79227408	protein_coding	Setbp1	intron	ENSMUSG00000024548	ProperStrand	18	1	-15.4716
chr7	35025622	35025664	protein_coding	4931406P16Rik	exon	ENSMUSG00000066571	ProperStrand	75	chr15	34370545	34370664	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-3.1423
chr3	84995363	84995380	protein_coding	Arfip1	intron	ENSMUSG00000074513	NonProperStrand	56	chr15	98350209	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-4.8936
chr18	42362155	42362204	protein_coding	Lars	utr3	ENSMUSG00000024493	ProperStrand	69	chr2	158451027	158451043	protein_coding	Actr5	exon	ENSMUSG00000037761	NonProperStrand	94	1	-12.1297
chr9	78023112	78023145	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr19	5382271	5382337	protein_coding	Sart1	exon	ENSMUSG00000039148	ProperStrand	32	1	-7.1260
chr2	117686645	117686666	lincRNA	4930412B13Rik	intron	ENSMUSG00000086221	ProperStrand	4	chr7	29136525	29136577	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-7.7378
chr6	134594348	134594365	protein_coding	Loh12cr1	exon	ENSMUSG00000042992	ProperStrand	16	chr5	135529857	135529952	snoRNA	ENSMUSG00000088008_SCARNA20	.	ENSMUSG00000088008	ProperStrand	139	1	-14.3072
chr5	116102653	116102753	protein_coding	Ccdc64	utr5	ENSMUSG00000041609	ProperStrand	51	chr7	52974975	52975293	protein_coding	Rpl18	exon	ENSMUSG00000059070	ProperStrand	116	1	-12.3172
chr1	11289060	11289078	protein_coding	Prex2	utr3	ENSMUSG00000048960	NonProperStrand	15	chr7	116664841	116664927	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-8.5515
chr13	54723202	54723218	protein_coding	Faf2	exon	ENSMUSG00000025873	ProperStrand	90	chr1	162966813	162966838	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-5.4634
chr19	45409733	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr11	98878374	98878466	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-2.0383
chr15	79392341	79392403	protein_coding	Dmc1	utr3	ENSMUSG00000022429	ProperStrand	8	chr19	8800370	8800470	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-7.5245
chr9	74800982	74800998	protein_coding	BC031353	utr5	ENSMUSG00000034858	ProperStrand	14	chr2	130101258	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-9.5317
chr3	153573768	153575159	protein_coding	Rabggtb	exon	ENSMUSG00000038975	ProperStrand	667	chr7	116663629	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	11	-4.8900
chr18	73693113	73693134	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr3	85942714	85942779	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	2	-3.9580
chr7	3657420	3657510	protein_coding	Rps9	exon	ENSMUSG00000006333	ProperStrand	87	chr5	130300470	130300550	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.8963
chr13	9833558	9833657	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr9	64143791	64143877	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	4	-2.9577
chr2	144080861	144080933	protein_coding-noncoding	Snx5	utr3	ENSMUSG00000027423	ProperStrand	4	chr7	129147433	129147462	protein_coding	Gga2	exon	ENSMUSG00000030872	ProperStrand	65	4	-inf
chr4	117834302	117834347	protein_coding	Kdm4a	exon	ENSMUSG00000033326	ProperStrand	81	chr9	15118335	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-2.9246
chr1	4114145	4114165	SINE	MIRb	MIR	chr1MIRb4114100	ProperStrand	1	chr2	25915656	25915672	protein_coding	Nacc2	exon	ENSMUSG00000026932	ProperStrand	98	1	-inf
chr9	108744103	108744138	protein_coding	Celsr3	exon	ENSMUSG00000023473	ProperStrand	31	chr17	17521888	17521943	protein_coding	Riok2	exon	ENSMUSG00000023846	ProperStrand	8	2	-19.5320
chr6	28476120	28476915	protein_coding	Snd1	exon	ENSMUSG00000001424	ProperStrand	210	chr15	79658387	79658403	protein_coding	Cbx6	utr3	ENSMUSG00000089715	NonProperStrand	11	1	-14.2663
chr7	13617913	13618018	protein_coding	Chmp2a	exon	ENSMUSG00000033916	ProperStrand	17	chr12	88778631	88778749	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	6	-inf
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr15	78127411	78127427	protein_coding	Csf2rb2	exon	ENSMUSG00000071714	NonProperStrand	14	1	-11.5511
chr17	24300935	24300993	protein_coding	Atp6v0c	utr3	ENSMUSG00000024121	ProperStrand	75	chr19	8963088	8963178	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-3.4775
chr10	61767594	61778201	protein_coding	Hk1	exon	ENSMUSG00000037012	ProperStrand	84	chr19	8963095	8963175	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.7343
chr5	120133106	120133175	protein_coding	Tbx3	utr3	ENSMUSG00000018604	ProperStrand	87	chr4	131866639	131866676	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	4	-19.5452
chr2	26493366	26493485	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr14	52829497	52829570	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	5	-2.4228
chr3	95133990	95134084	protein_coding	Setdb1	intron	ENSMUSG00000015697	ProperStrand	23	chr11	120502797	120502829	protein_coding	Pycr1	exon	ENSMUSG00000025140	ProperStrand	17	1	-17.6602
chr9	50816824	50816841	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	chrX	93136011	93136027	protein_coding	Las1l	exon	ENSMUSG00000057421	ProperStrand	248	1	-8.9652
chr15	36701467	36701543	protein_coding	Ywhaz	utr3	ENSMUSG00000022285	ProperStrand	73	chr8	73419657	73419682	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.7815
chr7	134088748	134088824	protein_coding	Kctd13	utr3	ENSMUSG00000030685	ProperStrand	6	chr11	6428033	6428096	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-7.7732
chr5	109123274	109123291	protein_coding	Fgfrl1	utr5	ENSMUSG00000008090	NonProperStrand	2	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-14.4340
chr11	118900007	118900025	protein_coding	Cbx8	exon	ENSMUSG00000025578	ProperStrand	95	chr17	39985191	39985287	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	4	-15.6144
chr17	36394628	36394646	protein_coding	Rpp21	exon	ENSMUSG00000024446	ProperStrand	2	chr8	98270049	98270082	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-12.9619
chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	chr17	35089182	35089235	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-2.0035
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr5	34804860	34804891	protein_coding	Fam193a	exon	ENSMUSG00000037210	ProperStrand	41	1	-7.7879
chr12	110887827	110887890	snoRNA	ENSMUSG00000084549_SNORD113	.	ENSMUSG00000084549	ProperStrand	196	chr8	32260335	32260374	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	3	-6.5004
chr2	127861830	127861848	protein_coding	Acoxl	intron	ENSMUSG00000027380	NonProperStrand	12	chr18	35716788	35716836	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-5.1577
chr14	122078083	122078101	protein_coding	Dock9	intron	ENSMUSG00000025558	ProperStrand	38	chr3	68889167	68889214	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-4.1061
chr6	125372627	125372646	Low_complexity	G-rich	Low_complexity	chr6G-rich125372585	NonProperStrand	1	chr1	89673619	89673719	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-inf
chr7	52713433	52714543	protein_coding	Ftl1	utr3	ENSMUSG00000050708	ProperStrand	807	chr7	117189952	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	9	-4.8603
chr3	101383568	101383723	protein_coding	Atp1a1	exon	ENSMUSG00000033161	ProperStrand	316	chr12	110918157	110918221	snoRNA	ENSMUSG00000065749_AF357428	.	ENSMUSG00000065749	ProperStrand	218	1	-7.4085
chr18	60997616	60998398	protein_coding	Tcof1	exon	ENSMUSG00000024613	ProperStrand	68	chr7	129311263	129312092	protein_coding	Plk1	exon	ENSMUSG00000030867	ProperStrand	146	1	-11.2766
chr10	52265500	52265516	protein_coding	Zfa	utr5	ENSMUSG00000049576	NonProperStrand	1	chr11	106362556	106362609	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-inf
chr2	172805565	172805582	protein_coding	Spo11	intron	ENSMUSG00000005883	NonProperStrand	7	chr11	48615535	48615599	snoRNA	ENSMUSG00000064725_Snord96a	.	ENSMUSG00000064725	ProperStrand	89	1	-16.9931
chr4	117898726	117898765	protein_coding	Ptprf	exon	ENSMUSG00000033295	ProperStrand	337	chr11	83107865	83107902	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	1	-5.4236
chr6	149274062	149274083	protein_coding	2810474O19Rik	exon	ENSMUSG00000032712	ProperStrand	70	chr10	23505150	23505215	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.0304
chr4	108180931	108181031	protein_coding	Zcchc11	exon	ENSMUSG00000034610	ProperStrand	35	chr16	23111374	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	22	-19.9758
chr3	97817679	97851652	protein_coding	Notch2	exon	ENSMUSG00000027878	ProperStrand	86	chr10	120709244	120712786	protein_coding	Tbc1d30	exon	ENSMUSG00000052302	ProperStrand	233	1	-9.8699
mmu-miR-3470a	0	15	miRNA	mmu-miR-3470a	.	mmu-miR-3470a	ProperStrand	1	chr9	120038562	120038667	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-inf
chr3	148651760	148651845	protein_coding	Lphn2	utr5	ENSMUSG00000028184	ProperStrand	20	chr18	33954917	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-5.6191
chr4	41160875	41160894	protein_coding	Ubap2	intron	ENSMUSG00000028433	ProperStrand	292	chr19	8963080	8963170	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-0.7076
chr9	94437767	94437784	protein_coding	1190002N15Rik	exon	ENSMUSG00000045414	NonProperStrand	11	chr4	122970392	122970449	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-10.8669
chr13	63646365	63646407	protein_coding	Ptch1	exon	ENSMUSG00000021466	ProperStrand	50	chr1	89673615	89673715	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-3.5979
chr15	78893228	78893263	protein_coding	Ankrd54	utr5	ENSMUSG00000033055	ProperStrand	2	chr1	9932546	9932625	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-15.1916
chr4	53034223	53034323	protein_coding	Nipsnap3b	utr3	ENSMUSG00000015247	ProperStrand	3	chr12	107052569	107052596	protein_coding	Papola	intron	ENSMUSG00000021111	ProperStrand	67	1	-19.0826
chr8	125515793	125515883	protein_coding	Ankrd11	intron	ENSMUSG00000035569	ProperStrand	380	chr18	73693110	73693138	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	2	-3.8251
chr2	20821469	20821561	protein_coding	Arhgap21	intron	ENSMUSG00000036591	ProperStrand	49	chr3	123210891	123210981	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	NonProperStrand	45	1	-14.3113
chr5	121655797	121658574	protein_coding	Rpl6	exon	ENSMUSG00000029614	ProperStrand	332	chr15	34370545	34370598	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	14	-inf
chr3	116475312	116475413	protein_coding	Agl	exon	ENSMUSG00000033400	ProperStrand	18	chr7	117190025	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-5.6444
chr1	180267211	180267301	protein_coding	Hnrnpu	exon	ENSMUSG00000039630	ProperStrand	286	chr7	29136525	29136550	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	10	-9.9843
chr16	57391590	57391676	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr12	17553062	17553081	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	NonProperStrand	16	1	-12.9930
chr9	22044543	22044638	protein_coding	Zfp809	intron	ENSMUSG00000057982	ProperStrand	10	chr16	23110491	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.8693
chr4	116827118	116827184	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	chr15	98356817	98356901	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	1	-1.8791
chr1	166368264	166388100	protein_coding	Atp1b1	utr5	ENSMUSG00000026576	ProperStrand	67	chr16	23111374	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-2.1734
chr2	120872244	120872260	protein_coding	Tgm5	exon	ENSMUSG00000053675	NonProperStrand	163	chr11	101466260	101466351	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	1	-6.8817
chr6	117874599	117874667	protein_coding	Hnrnpf	exon	ENSMUSG00000042079	ProperStrand	147	chr16	23110495	23110585	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.0963
chr19	42253940	42256051	protein_coding	Zfyve27	exon	ENSMUSG00000018820	ProperStrand	23	chr11	97642952	97642981	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	12	-20.6639
chr5	141186157	141186214	protein_coding	Baat1	exon	ENSMUSG00000000148	ProperStrand	14	chr7	108971290	108971306	protein_coding	Inppl1	utr3	ENSMUSG00000032737	ProperStrand	272	1	-13.2470
chr16	13813339	13813429	protein_coding	Rrn3	utr3	ENSMUSG00000022682	ProperStrand	58	chr15	34370595	34370675	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-3.6118
chr10	80641982	80642097	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr7	148268925	148269015	protein_coding	Pkp3	exon	ENSMUSG00000054065	ProperStrand	4	1	-11.7428
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr6	115757992	115758116	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-1.1303
chr8	83505745	83505815	protein_coding	Usp38	exon	ENSMUSG00000038250	ProperStrand	26	chr18	33954826	33954916	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-5.1001
chrX	20939317	20939334	pseudogene	Gm5124	.	ENSMUSG00000051537	ProperStrand	1	chr11	62416630	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-inf
chr4	116283413	116283503	protein_coding	Nasp	exon	ENSMUSG00000028693	ProperStrand	64	chr2	32818806	32818886	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-5.3448
chr9	78023129	78023209	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr8	122465619	122465709	protein_coding	Usp10	exon	ENSMUSG00000031826	ProperStrand	98	1	-4.9224
chr15	78710631	78710698	protein_coding	Gga1	intron	ENSMUSG00000033128	ProperStrand	15	chr12	60141347	60141437	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-9.6303
chr16	23111386	23111476	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	chr12	110919777	110919801	snoRNA	ENSMUSG00000065022_AF357341	.	ENSMUSG00000065022	ProperStrand	7	1	-5.0992
chr3	96218436	96218526	misc_RNA	Telomerase-vert	.	ENSMUSG00000064796	ProperStrand	443	chr1	162965531	162965553	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-0.9355
chr4	131825994	131826094	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	chr17	35089181	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	2	-3.2690
chr11	69481336	69481434	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	chr1	145626066	145626189	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	5	-2.4907
chr9	118468509	118468609	protein_coding	Golga4	exon	ENSMUSG00000038708	ProperStrand	95	chr11	62416635	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-4.2839
chr12	63334213	63334230	LTR	RLTR9E	ERVK	chr12RLTR9E63333890	NonProperStrand	15	chr8	126220366	126220383	protein_coding	Gm20388	intron	ENSMUSG00000092329	ProperStrand	295	1	-12.9409
chr8	125418803	125418819	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	chr11	6519829	6519929	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-4.3323
chr7	85701217	85701237	protein_coding	Ntrk3	intron	ENSMUSG00000059146	NonProperStrand	4	chr5	130295414	130295500	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-10.8690
chrX	103164350	103164409	protein_coding	Magt1	utr3	ENSMUSG00000031232	ProperStrand	12	chr19	8799830	8799897	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	2	-13.1369
chr4	135327523	135329683	protein_coding	Myom3	exon	ENSMUSG00000037139	NonProperStrand	62	chr7	67123715	67123759	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	2	-14.9932
chr2	136910405	136910422	protein_coding	Jag1	exon	ENSMUSG00000027276	ProperStrand	15	chr9	15119645	15119712	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.2385
chr8	128309338	128309354	protein_coding	Pcnxl2	exon	ENSMUSG00000060212	NonProperStrand	6	chr2	130101258	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-11.3294
chr12	87865704	87865722	SINE	RSINE1	B4	chr12RSINE187865630	ProperStrand	36	chr1	82441043	82441152	protein_coding	Rhbdd1	utr3	ENSMUSG00000026142	ProperStrand	22	2	-21.1070
chr8	4267337	4267649	protein_coding	Timm44	exon	ENSMUSG00000002949	ProperStrand	63	chr14	60045346	60045388	protein_coding	Setdb2	exon	ENSMUSG00000071350	ProperStrand	1	1	-inf
chr1	40053934	40053951	protein_coding	Map4k4	exon	ENSMUSG00000026074	ProperStrand	348	chr2	130101257	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-3.2308
chr6	122679675	122679708	protein_coding	Slc2a3	utr3	ENSMUSG00000003153	ProperStrand	682	chr2	165904622	165904638	protein_coding	Sulf2	exon	ENSMUSG00000006800	ProperStrand	171	1	-6.3712
chr7	149562416	149562442	protein_coding	Ctsd	utr3	ENSMUSG00000007891	ProperStrand	60	chr1	59539683	59539700	protein_coding	Fzd7	utr5	ENSMUSG00000041075	ProperStrand	373	1	-9.6530
chr19	27837820	27837836	protein_coding	Rfx3	utr3	ENSMUSG00000040929	ProperStrand	92	chr1	59761694	59761715	snoRNA	ENSMUSG00000089093_Snord11	.	ENSMUSG00000089093	ProperStrand	193	1	-10.1112
chr17	23948687	23949412	protein_coding	Srrm2	utr5	ENSMUSG00000039218	ProperStrand	521	chr7	26594610	26596707	protein_coding	Cyp2s1	exon	ENSMUSG00000040703	ProperStrand	18	1	-11.4273
chr3	153573528	153573596	snoRNA	ENSMUSG00000064731_Snord45b	.	ENSMUSG00000064731	ProperStrand	205	chr17	35299507	35299607	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-2.5228
chr11	69494018	69494065	protein_coding	Senp3	utr5	ENSMUSG00000005204	ProperStrand	65	chr8	127434570	127434587	protein_coding	Egln1	utr3	ENSMUSG00000031987	NonProperStrand	7	1	-17.6356
chr12	4212103	4212203	protein_coding	Adcy3	exon	ENSMUSG00000020654	ProperStrand	33	chr2	26768393	26768433	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-6.7846
chr7	53323769	53323824	protein_coding	Nomo1	exon	ENSMUSG00000030835	ProperStrand	85	chr11	62590608	62590630	snoRNA	ENSMUSG00000064692_SNORA67	.	ENSMUSG00000064692	ProperStrand	185	2	-16.2699
chr7	28213263	28218125	protein_coding	Spnb4	exon	ENSMUSG00000011751	ProperStrand	39	chr19	8963031	8963111	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.0232
chr7	29107086	29107239	protein_coding	Supt5h	exon	ENSMUSG00000003435	ProperStrand	123	chr7	116663667	116663767	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.3781
chr11	83765646	83765746	protein_coding	Ddx52	exon	ENSMUSG00000020677	ProperStrand	9	chr19	8799835	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-8.7715
chr14	111102302	111102318	LINE	Lx3_Mus	L1	chr14Lx3_Mus111100808	NonProperStrand	7	chr9	15119712	15119747	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-6.8089
chr6	88435849	88435865	protein_coding	Ruvbl1	exon	ENSMUSG00000030079	NonProperStrand	54	chr18	35716831	35716865	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.3452
chr9	59519777	59519877	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chrX	91442787	91445079	protein_coding	Eif2s3x	exon	ENSMUSG00000035150	ProperStrand	55	1	-7.3519
chrX	11635848	11635865	protein_coding	Bcor	exon	ENSMUSG00000040363	NonProperStrand	293	chr4	116827120	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-3.9648
chr8	125627102	125627158	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	chr12	110918201	110918221	snoRNA	ENSMUSG00000065749_AF357428	.	ENSMUSG00000065749	ProperStrand	218	1	-8.0301
chr6	71550571	71550758	protein_coding	Kdm3a	exon	ENSMUSG00000053470	ProperStrand	41	chr9	120037916	120038006	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-5.4456
chr3	90207973	90208438	protein_coding	Ints3	exon	ENSMUSG00000027933	NonProperStrand	7	chr12	60141412	60141509	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-11.2356
chr10	75408280	75408354	pseudogene	Gm16221	.	ENSMUSG00000082234	ProperStrand	1	chr4	116826698	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-inf
chr7	13516166	13516207	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr7	117189898	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	5	-2.4587
chr6	120390132	120390178	protein_coding	Kdm5a	utr3	ENSMUSG00000030180	ProperStrand	57	chr2	146125208	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	1	-11.1686
chr11	45723144	45723160	protein_coding	Clint1	utr3	ENSMUSG00000006169	NonProperStrand	273	chr5	145532202	145532254	protein_coding	Trrap	intron	ENSMUSG00000045482	ProperStrand	399	1	-6.5041
chr15	25722928	25722966	protein_coding	Myo10	exon	ENSMUSG00000022272	ProperStrand	168	chr11	97546405	97546421	protein_coding	Mllt6	utr3	ENSMUSG00000038437	ProperStrand	110	1	-10.0305
chr15	84031060	84031106	protein_coding	Samm50	exon	ENSMUSG00000022437	ProperStrand	51	chr2	130101971	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	11	-20.0141
mmu-miR-6240	2	25	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr12	16746763	16746779	protein_coding	Greb1	exon	ENSMUSG00000036523	NonProperStrand	11	1	-9.3335
chr19	45836765	45836822	protein_coding	Mgea5	intron	ENSMUSG00000025220	ProperStrand	53	chr6	83111671	83111687	protein_coding	1700003E16Rik	exon	ENSMUSG00000030030	ProperStrand	352	1	-10.0182
chr10	41644311	41644329	protein_coding	Armc2	exon	ENSMUSG00000071324	ProperStrand	281	chr12	17552948	17553029	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-2.2655
chr7	86771803	86771824	SINE	ID4_	ID	chr7ID4_86771799	NonProperStrand	4	chr12	17552949	17553030	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-10.7041
chr13	30907042	30907099	protein_coding	Exoc2	utr3	ENSMUSG00000021357	ProperStrand	24	chr5	121655027	121655096	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-9.0624
chr8	87196183	87196273	protein_coding	Nacc1	utr3	ENSMUSG00000001910	ProperStrand	130	chr14	76247754	76247834	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	11	-18.9292
chr11	17458575	17458594	LINE	L1VL4	L1	chr11L1VL417458097	ProperStrand	5	chr9	120037896	120037987	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	2	-15.8143
chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-4.3828
chr7	87358194	87360518	protein_coding	Sema4b	exon	ENSMUSG00000030539	ProperStrand	54	chr1	172993122	172993139	protein_coding	Fcgr3	intron	ENSMUSG00000059498	ProperStrand	44	1	-14.1560
chr9	18109671	18109738	protein_coding	Chordc1	intron	ENSMUSG00000001774	ProperStrand	5	chr17	24857767	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-11.8657
chr9	15130913	15131005	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	chr10	62342117	62342184	protein_coding	Tet1	exon	ENSMUSG00000047146	ProperStrand	286	1	-6.1125
chr2	79857441	79857458	protein_coding	Pde1a	intron	ENSMUSG00000059173	ProperStrand	5	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-11.7344
chr2	63936034	63936053	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr11	6519810	6519880	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	3	-7.0351
mmu-miR-2137	0	20	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	chr19	8799022	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	4	-13.3140
chr9	86593163	86593772	snRNA	ENSMUSG00000093074_CAAA01037531.1.36077.1	.	ENSMUSG00000093074	ProperStrand	13	chr16	23111704	23111804	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.6795
chr2	158451027	158451043	protein_coding	Actr5	exon	ENSMUSG00000037761	NonProperStrand	94	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-4.3483
chr14	80262508	80262525	lincRNA	Gm6999	intron	ENSMUSG00000075495	ProperStrand	265	chr15	81828613	81829975	protein_coding	Pppde2	exon	ENSMUSG00000022472	ProperStrand	12	1	-13.6188
chrX	78482930	78483010	LTR	MMETn-int	ERVK	chrXMMETn-int78482914	NonProperStrand	1	chrX	82323565	82323655	protein_coding	Dmd	intron	ENSMUSG00000045103	NonProperStrand	23	1	-inf
chr7	148633550	148633815	protein_coding	Rplp2	utr5	ENSMUSG00000025508	ProperStrand	106	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.2045
chr5	121272151	121272168	protein_coding	Oas1b	utr3	ENSMUSG00000029605	ProperStrand	1	chr6	124665430	124665523	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	1	-inf
chr4	117904022	117904112	protein_coding	Ptprf	intron	ENSMUSG00000033295	ProperStrand	337	chr5	108334247	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	14	-20.4404
chr4	135521534	135521550	protein_coding	Gale	exon	ENSMUSG00000028671	ProperStrand	61	chr11	71883944	71884395	protein_coding	Pitpnm3	exon	ENSMUSG00000040543	ProperStrand	3	1	-21.4093
chr11	6428008	6428046	lincRNA	Gm11974	exon	ENSMUSG00000085156	ProperStrand	34	chr15	34370546	34370636	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	8	-19.5130
chr6	125112116	125112262	protein_coding	Gapdh	exon	ENSMUSG00000057666	ProperStrand	356	chr2	26493366	26493474	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-0.8912
chr15	76735395	76736309	protein_coding	Rpl8	exon	ENSMUSG00000003970	ProperStrand	191	chr2	61549756	61549772	protein_coding	Psmd14	utr5	ENSMUSG00000090649	ProperStrand	7	1	-15.4216
chr14	72507127	72507146	LINE	Lx5	L1	chr14Lx572506939	NonProperStrand	1	chr16	23110873	23110889	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr17	46861595	46861611	protein_coding	Pex6	exon	ENSMUSG00000002763	ProperStrand	292	chr8	44381728	44381757	protein_coding	Zfp42	exon	ENSMUSG00000051176	ProperStrand	127	1	-8.6399
chr13	74494655	74494671	protein_coding	Ccdc127	utr3	ENSMUSG00000021578	NonProperStrand	54	chr9	59387491	59387582	protein_coding	Hexa	utr5	ENSMUSG00000025232	ProperStrand	12	1	-16.8471
chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	chr12	106269428	106269445	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-1.1662
chr5	32957884	32957906	protein_coding	Yes1	exon	ENSMUSG00000014932	ProperStrand	11	chr10	23505152	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-7.0732
chr11	119971536	119971636	protein_coding	Slc38a10	exon	ENSMUSG00000061306	ProperStrand	91	chr18	35716839	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.5183
chr19	3308107	3308187	LINE	L1MB7	L1	chr19L1MB73308111	ProperStrand	1	chr19	3308223	3308313	SINE	B1_Mur3	Alu	chr19B1_Mur33308198	ProperStrand	1	1	-inf
chr13	80636125	80636144	LINE	Lx8	L1	chr13Lx880635645	ProperStrand	20	chr17	35089181	35089233	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-7.6750
chr3	55987451	55987470	protein_coding	Nbea	utr5	ENSMUSG00000027799	ProperStrand	53	chr4	131908810	131908876	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.3969
chr11	5441764	5441781	protein_coding	Ccdc117	intron	ENSMUSG00000020482	NonProperStrand	20	chr9	120037898	120037990	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	3	-15.7202
chr1	164655771	164655830	protein_coding	Prrc2c	intron	ENSMUSG00000040225	ProperStrand	413	chr6	97112809	97112879	snoRNA	ENSMUSG00000065728_SNORA36	.	ENSMUSG00000065728	ProperStrand	158	3	-16.8322
mmu-miR-6238	2	19	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr13	21998976	21999062	tRNA	tRNA82-MetCAT	.	552004	ProperStrand	44	2	-17.5513
chr1	148125344	148125361	LTR	RLTR5_Mm	ERV1	chr1RLTR5_Mm148125338	NonProperStrand	1	chr9	60240921	60240938	protein_coding	Thsd4	intron	ENSMUSG00000032289	NonProperStrand	9	1	-inf
chr2	34481724	34481740	SINE	B3	B2	chr2B334481545	ProperStrand	1	chr15	34370619	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-inf
chr5	151755615	151755632	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr1	18204299	18204315	pseudogene	Defb44-ps	.	ENSMUSG00000070977	ProperStrand	37	1	-8.7093
chr4	117156969	117156987	protein_coding	Rnf220	intron	ENSMUSG00000028677	ProperStrand	131	chrX	7752870	7752886	protein_coding	Tbc1d25	exon	ENSMUSG00000039201	ProperStrand	126	1	-10.2560
chr4	52471439	52471953	protein_coding	Smc2	exon	ENSMUSG00000028312	ProperStrand	50	chr19	8963027	8963127	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.5849
chr7	29606446	29606904	protein_coding	Hnrnpl	exon	ENSMUSG00000015165	ProperStrand	150	chrX	34622906	34622943	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	4	-6.5582
chr15	34372801	34372819	protein_coding	Rpl30	utr5	ENSMUSG00000058600	ProperStrand	65	chr11	62416593	62416657	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-5.0111
chr1	92689614	92689630	protein_coding	Col6a3	exon	ENSMUSG00000048126	ProperStrand	79	chr5	108336363	108336409	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-4.3537
chr5	29761742	29761787	protein_coding	Nom1	exon	ENSMUSG00000001569	ProperStrand	11	chr16	23110965	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.6241
chr7	4978453	4978492	protein_coding	Zfp865	intron	ENSMUSG00000074405	ProperStrand	15	chr17	24857722	24857812	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.8602
chr12	3256970	3264696	protein_coding	Rab10	exon	ENSMUSG00000020671	ProperStrand	11	chr14	66342756	66342772	protein_coding	Scara5	intron	ENSMUSG00000022032	ProperStrand	30	1	-18.1642
chr10	39978350	39978440	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	chr6	125071750	125071816	snoRNA	ENSMUSG00000088208_SCARNA11	.	ENSMUSG00000088208	ProperStrand	113	17	-inf
chr13	38515887	38515987	protein_coding	Bmp6	intron	ENSMUSG00000039004	ProperStrand	21	chr4	131908236	131908292	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.1622
chr4	40888317	40888334	protein_coding	Bag1	intron	ENSMUSG00000028416	NonProperStrand	2	chr16	23111763	23111812	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-8.9529
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr11	78364108	78364230	protein_coding	Tmem97	utr5	ENSMUSG00000037278	ProperStrand	35	1	-8.8773
chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-1.0781
chr1	108620942	108620958	protein_coding	Kdsr	utr3	ENSMUSG00000009905	ProperStrand	17	chr4	22414139	22414155	protein_coding	Pou3f2	exon	ENSMUSG00000052621	NonProperStrand	90	1	-15.0635
chr6	122273111	122273211	protein_coding	Phc1	exon	ENSMUSG00000040669	ProperStrand	158	chr19	8798740	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-2.9982
chr4	86502797	86502847	protein_coding-noncoding	Rps6	utr3	ENSMUSG00000028495	ProperStrand	4	chr4	134926614	134927796	protein_coding	A330049M08Rik	exon	ENSMUSG00000043924	ProperStrand	130	1	-17.3442
chr4	20548793	20548811	protein_coding	Nkain3	intron	ENSMUSG00000055761	ProperStrand	34	chr5	108336363	108336406	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-5.9928
chr2	158457348	158457365	protein_coding	Actr5	exon	ENSMUSG00000037761	NonProperStrand	94	chr1	162965531	162965584	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-6.5547
chr2	112184081	112184297	protein_coding	Slc12a6	exon	ENSMUSG00000027130	ProperStrand	35	chr10	23505152	23505217	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.0450
chr2	158185597	158185653	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr4	46508027	46508117	snoRNA	ENSMUSG00000064410_SNORA36	.	ENSMUSG00000064410	ProperStrand	133	1	-4.9303
chr16	22382632	22382744	protein_coding	Etv5	utr3	ENSMUSG00000013089	ProperStrand	88	chr19	8800377	8800419	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-2.8391
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr7	29683654	29683735	protein_coding	Actn4	exon	ENSMUSG00000054808	ProperStrand	120	1	-6.5974
chr1	55135152	55135537	protein_coding	Hspd1	exon	ENSMUSG00000025980	ProperStrand	140	chr4	131866155	131866248	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	3	-5.8715
chr11	4820972	4820990	protein_coding	Thoc5	intron	ENSMUSG00000034274	ProperStrand	325	chr9	15118518	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	1	-5.9883
chr14	122870816	122870832	lincRNA	2610035F20Rik	exon	ENSMUSG00000085555	ProperStrand	29	chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-7.9068
chr18	48207418	48207529	protein_coding	Gm5506	exon	ENSMUSG00000059040	ProperStrand	105	chr1	63225678	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-5.5673
chr11	79748975	79749075	protein_coding	Utp6	utr3	ENSMUSG00000035575	ProperStrand	28	chr17	24665421	24665467	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-6.4402
chr1	191058375	191058393	protein_coding	Kcnk2	intron	ENSMUSG00000037624	ProperStrand	56	chr13	76341035	76341055	protein_coding	Fam81b	intron	ENSMUSG00000078966	NonProperStrand	220	1	-10.8466
chr5	116174721	116174738	protein_coding	Ccdc64	exon	ENSMUSG00000041609	ProperStrand	51	chr12	112779158	112779192	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-5.0904
chr1	63161264	63161281	lincRNA	Gm11602	intron	ENSMUSG00000084799	ProperStrand	22	chr17	29101960	29102023	protein_coding	Kctd20	exon	ENSMUSG00000005936	ProperStrand	21	1	-17.2767
chr18	52646607	52646697	protein_coding	Srfbp1	intron	ENSMUSG00000024528	ProperStrand	9	chr11	97643011	97643091	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-6.0986
chrX	84483697	84483718	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr3	89750435	89750451	protein_coding	Atp8b2	exon	ENSMUSG00000060671	ProperStrand	140	1	-6.5653
chr2	130698677	130698757	protein_coding	4930402H24Rik	intron	ENSMUSG00000027309	NonProperStrand	12	chr3	156902160	156902250	protein_coding	Negr1	intron	ENSMUSG00000040037	NonProperStrand	25	1	-18.2437
chr11	78085519	78085627	protein_coding	2610507B11Rik	exon	ENSMUSG00000010277	ProperStrand	246	chr2	27391457	27391505	protein_coding	Wdr5	utr3	ENSMUSG00000026917	ProperStrand	81	1	-9.8815
chr2	129998666	129998715	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr19	8800355	8800445	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	5	-1.8724
chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr11	62590600	62590630	snoRNA	ENSMUSG00000064692_SNORA67	.	ENSMUSG00000064692	ProperStrand	185	2	-2.6667
chr7	70880862	70880881	protein_coding	Otud7a	intron	ENSMUSG00000033510	ProperStrand	16	chr8	73419657	73419742	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-5.6620
chr7	152049452	152049547	protein_coding	Fgf4	utr3	ENSMUSG00000050917	ProperStrand	66	chr2	144087323	144087371	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	3	-14.5308
chr5	138046466	138046695	protein_coding	Pcolce	exon	ENSMUSG00000029718	ProperStrand	63	chr5	130300443	130300523	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.4262
chr17	39985625	39985725	pseudogene	AY036118	.	ENSMUSG00000045999	ProperStrand	57	chr3	123210854	123210882	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	NonProperStrand	45	2	-19.7880
chr9	63868722	63868738	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	chr19	47342007	47342066	protein_coding	Sh3pxd2a	exon	ENSMUSG00000053617	ProperStrand	57	1	-8.6896
chr10	53369393	53369426	protein_coding	Fam184a	intron	ENSMUSG00000019856	ProperStrand	2	chr2	26493386	26493486	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-11.0703
chr10	75501973	75502034	protein_coding	Zfp280b	exon	ENSMUSG00000049764	ProperStrand	25	chr7	148634796	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-5.6811
chr6	119798666	119798790	protein_coding	3110021A11Rik	utr3	ENSMUSG00000050604	ProperStrand	1	chr10	23505152	23505182	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-inf
chrX	72351087	72351672	protein_coding	Dkc1	exon	ENSMUSG00000031403	ProperStrand	89	chr11	69483141	69483231	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.8056
chr8	59966314	59966359	protein_coding	Sap30	exon	ENSMUSG00000031609	ProperStrand	16	chr18	35716836	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.5854
chr15	76433999	76434026	protein_coding	Cpsf1	exon	ENSMUSG00000034022	ProperStrand	127	chr7	116664817	116664907	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.3636
chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	chr10	23506278	23506346	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-5.3533
chr17	32957268	32957284	lincRNA	Gm16684	intron	ENSMUSG00000085948	ProperStrand	43	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-8.4069
chr4	43505850	43505930	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr2	165880416	165880506	protein_coding	Ncoa3	exon	ENSMUSG00000027678	ProperStrand	58	1	-3.1313
chr4	150538028	150538044	protein_coding	Camta1	exon	ENSMUSG00000014592	ProperStrand	170	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-5.6823
chr6	115573523	115576324	protein_coding	Raf1	exon	ENSMUSG00000000441	ProperStrand	30	chr16	23111697	23111787	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.0878
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-6.3136
chr11	6297100	6299726	protein_coding	Zmiz2	exon	ENSMUSG00000041164	ProperStrand	69	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-1.1561
chrX	71533839	71534003	protein_coding	Taz	exon	ENSMUSG00000009995	ProperStrand	59	chr9	120039578	120039678	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.3493
chr2	118301932	118301956	protein_coding	Srp14	utr3	ENSMUSG00000009549	ProperStrand	38	chr9	111370059	111370076	protein_coding	Dclk3	utr5	ENSMUSG00000032500	ProperStrand	2	1	-inf
chr15	3932858	3932895	protein_coding	AW549877	utr3	ENSMUSG00000041935	ProperStrand	17	chr4	131865903	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.9909
chr16	72800514	72800532	protein_coding	Robo1	intron	ENSMUSG00000022883	NonProperStrand	188	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-5.4864
chr7	116663438	116663485	protein_coding	Rpl27a	exon	ENSMUSG00000046364	ProperStrand	149	chr11	69481336	69481436	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-1.6721
chr11	55005017	55005035	LINE	Lx6	L1	chr11Lx655004542	ProperStrand	1	chr8	83138737	83138753	protein_coding	Frem3	exon	ENSMUSG00000042353	NonProperStrand	53	1	-inf
chr17	29175625	29175649	protein_coding-noncoding	Srsf3	utr5	ENSMUSG00000071172	ProperStrand	30	chr8	73419657	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.4253
chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	chr11	93808033	93808051	protein_coding	Mbtd1	utr3	ENSMUSG00000059474	ProperStrand	36	1	-8.7524
chr15	38591776	38591799	protein_coding	Atp6v1c1	utr5	ENSMUSG00000022295	ProperStrand	7	chr4	131908689	131908788	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.0493
chr1	154701467	154702999	protein_coding	Smg7	exon	ENSMUSG00000042772	ProperStrand	88	chr17	35088957	35089022	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-5.1204
chr4	117348516	117348606	protein_coding-noncoding	Dmap1	utr3	ENSMUSG00000009640	ProperStrand	1	chr16	23110902	23110982	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr3	135128258	135128307	protein_coding	Ube2d3	utr3	ENSMUSG00000078578	ProperStrand	34	chr2	26494708	26494800	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	6	-19.1830
chr5	93596706	93600429	protein_coding	Sept11	utr3	ENSMUSG00000058013	ProperStrand	79	chr7	116664819	116664871	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.0879
chr11	96822936	96823026	protein_coding	Sp2	exon	ENSMUSG00000018678	ProperStrand	11	chr9	15119649	15119729	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.8656
chr6	124760843	124760933	protein_coding	Tpi1	utr3	ENSMUSG00000023456	ProperStrand	94	chr2	26493369	26493449	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-2.9258
chr11	82692475	82692491	protein_coding	Rad51l3	exon	ENSMUSG00000018841	ProperStrand	112	chr11	120676500	120676626	protein_coding	Fasn	exon	ENSMUSG00000025153	ProperStrand	298	1	-8.8503
chr10	41644311	41644329	protein_coding	Armc2	exon	ENSMUSG00000071324	ProperStrand	281	chr4	116826700	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-3.7986
chr13	9833571	9833660	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr15	43109961	43114221	protein_coding	Eif3e	exon	ENSMUSG00000022336	ProperStrand	17	1	-7.4613
chr15	102128952	102150245	protein_coding	Espl1	exon	ENSMUSG00000058290	ProperStrand	172	chr16	23110891	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	11	-2.9485
chr19	40009594	40009613	LINE	Lx3C	L1	chr19Lx3C40009363	ProperStrand	1	chr9	120038552	120038588	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-inf
chr6	86475811	86475839	protein_coding	Pcbp1	exon	ENSMUSG00000051695	ProperStrand	108	chr7	116663683	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	6	-10.5631
chr18	68001083	68001142	protein_coding	Cep192	exon	ENSMUSG00000024542	ProperStrand	59	chr4	131908254	131908344	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.4429
chr2	144097020	144097037	protein_coding	8430406I07Rik	utr5	ENSMUSG00000027424	ProperStrand	43	chr4	131865856	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.3073
chr5	123894482	123894525	protein_coding	Mlxip	exon	ENSMUSG00000038342	ProperStrand	21	chr17	24856620	24856692	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-8.5335
chr11	69819483	69819800	protein_coding	Dvl2	exon	ENSMUSG00000020888	ProperStrand	94	chr19	17153309	17153329	protein_coding	Prune2	intron	ENSMUSG00000039126	ProperStrand	49	2	-20.8766
chr12	88691319	88696549	protein_coding	Sptlc2	exon	ENSMUSG00000021036	ProperStrand	43	chr5	130300471	130300551	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.0960
chr14	64081497	64081513	protein_coding	Fam167a	utr3	ENSMUSG00000035095	ProperStrand	80	chr11	74997522	74997583	protein_coding	Dph1	intron	ENSMUSG00000078789	ProperStrand	6	2	-19.3503
chr1	55073716	55076104	protein_coding	Sf3b1	exon	ENSMUSG00000025982	ProperStrand	158	chr7	13846274	13846290	protein_coding	6330408A02Rik	utr3	ENSMUSG00000070814	ProperStrand	10	1	-15.0302
chr4	56910496	56910596	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	chr7	88674817	88674867	snoRNA	ENSMUSG00000093107_AC167122.1	.	ENSMUSG00000093107	ProperStrand	110	1	-4.9248
chr2	90235290	90235332	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	93155104	93155193	protein_coding	Tspan18	intron	ENSMUSG00000023461	ProperStrand	1	1	-inf
chr16	36886302	36887328	antisense	4930565N06Rik	.	ENSMUSG00000084834	ProperStrand	27	chr12	17552946	17553033	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-6.6648
chrX	155936164	155936207	protein_coding	Mtap7d2	utr3	ENSMUSG00000041020	ProperStrand	10	chr2	158185574	158185651	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	5	-21.0942
chr13	23663295	23663385	protein_coding	Hist1h2bg	utr5	ENSMUSG00000058385	ProperStrand	29	chr12	88778637	88778717	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	2	-12.7258
chr14	65372758	65372799	snoRNA	ENSMUSG00000064442_SNORA36	.	ENSMUSG00000064442	ProperStrand	296	chr1	162966007	162966035	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-2.0147
chr10	20679688	20679778	protein_coding	Ahi1	exon	ENSMUSG00000019986	ProperStrand	10	chr4	131865895	131865975	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.0395
chr16	57391659	57391759	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr9	64022856	64022922	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-5.0715
chr5	102012725	102012805	SINE	B1_Mus2	Alu	chr5B1_Mus2102012745	NonProperStrand	1	chr19	16538548	16538638	protein_coding	Gna14	intron	ENSMUSG00000024697	ProperStrand	6	1	-inf
chr11	74488406	74488468	protein_coding	Pafah1b1	utr3	ENSMUSG00000020745	ProperStrand	20	chr7	13516123	13516189	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	3	-20.0361
chr6	71832550	71832579	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	chr4	86232354	86232454	snoRNA	ENSMUSG00000088958_Scarna8	.	ENSMUSG00000088958	ProperStrand	366	1	-2.2741
chr1	152283941	152284575	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	chr1	129271797	129271816	snoRNA	ENSMUSG00000065687_snoU6-53	.	ENSMUSG00000065687	ProperStrand	78	1	-8.3829
chr7	13516164	13516204	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr11	74718985	74719010	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	1	-4.4610
chr9	107851361	107851397	protein_coding	Camkv	utr3	ENSMUSG00000032936	NonProperStrand	2	chr4	131866152	131866252	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	NonProperStrand	19	1	-inf
chr7	17501421	17501478	protein_coding	Calm3	utr3	ENSMUSG00000019370	ProperStrand	28	chr2	26175463	26175480	protein_coding	Gpsm1	exon	ENSMUSG00000026930	NonProperStrand	1	1	-inf
chr12	70413651	70415416	protein_coding	Nemf	exon	ENSMUSG00000020982	ProperStrand	77	chr15	83197568	83197602	protein_coding	1700001L05Rik	utr5	ENSMUSG00000075511	ProperStrand	14	1	-15.7957
chr6	72388906	72388922	protein_coding	Mat2a	intron	ENSMUSG00000053907	ProperStrand	51	chr16	23111770	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.1663
chr2	165895775	165895797	protein_coding	Ncoa3	utr3	ENSMUSG00000027678	ProperStrand	58	chr17	35299551	35299641	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	4	-15.1915
chr18	84599514	84599587	protein_coding	Zfp407	intron	ENSMUSG00000048410	ProperStrand	34	chr7	119937417	119937436	protein_coding	Tead1	intron	ENSMUSG00000055320	ProperStrand	217	1	-11.8822
chr13	60862003	60862021	protein_coding	Dapk1	exon	ENSMUSG00000021559	NonProperStrand	40	chr3	123210854	123210922	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.7541
chr12	112779247	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	chr8	34802314	34802413	snoRNA	ENSMUSG00000088856_SNORA48	.	ENSMUSG00000088856	ProperStrand	236	1	-2.2845
chr15	45731029	45731119	LINE	Lx	L1	chr15Lx45730701	ProperStrand	1	chr7	65148232	65148312	LINE	L1Md_F2	L1	chr7L1Md_F265143069	ProperStrand	1	1	-inf
chr2	57900146	57900162	protein_coding	Ermn	utr3	ENSMUSG00000026830	ProperStrand	27	chr15	79908931	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-7.0558
chr10	18300131	18300232	Simple_repeat	(CCCTAA)n	Simple_repeat	chr10(CCCTAA)n18300158	ProperStrand	1	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-inf
chr13	45010137	45010227	protein_coding	Jarid2	exon	ENSMUSG00000038518	ProperStrand	372	chr4	116826699	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-3.2849
chr1	193391903	193391966	protein_coding	Dtl	intron	ENSMUSG00000037474	ProperStrand	27	chr16	23111386	23111476	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.5132
chr4	118809132	118809167	protein_coding	Slc2a1	utr3	ENSMUSG00000028645	ProperStrand	361	chr1	39605591	39605624	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	2	-6.4962
chr12	114238583	114238662	protein_coding	Brf1	utr5	ENSMUSG00000011158	ProperStrand	20	chr13	24824232	24824248	protein_coding	Fam65b	utr3	ENSMUSG00000036006	ProperStrand	51	1	-15.8788
chr3	153575114	153575169	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	chr15	79913288	79913334	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	4	-1.8281
chr9	59526808	59526867	protein_coding	Pkm2	utr3	ENSMUSG00000032294	ProperStrand	1296	chr1	63225282	63225322	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	1	-2.9077
chr15	12089446	12090259	protein_coding	Zfr	exon	ENSMUSG00000022201	ProperStrand	48	chr11	69481338	69481419	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.6095
chr2	160585845	160586837	protein_coding	Plcg1	exon	ENSMUSG00000016933	ProperStrand	65	chr7	116663673	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.3755
chr5	124777800	124777818	protein_coding	Mphosph9	utr5	ENSMUSG00000038126	ProperStrand	23	chr16	23111776	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.5778
chr19	44379580	44379670	protein_coding	Scd2	utr3	ENSMUSG00000025203	ProperStrand	219	chr5	121655021	121655101	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-1.5440
chr17	57213767	57213784	protein_coding	Dennd1c	intron	ENSMUSG00000002668	NonProperStrand	19	chr14	55126714	55126774	protein_coding	Prmt5	exon	ENSMUSG00000023110	ProperStrand	72	1	-15.2848
chr9	86593160	86593771	snRNA	ENSMUSG00000093074_CAAA01037531.1.36077.1	.	ENSMUSG00000093074	ProperStrand	13	chr18	35716685	35716761	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-8.3412
chr10	87820027	87820043	protein_coding	Dram1	intron	ENSMUSG00000020057	ProperStrand	24	chrX	34622905	34622980	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	3	-11.7029
chr6	22268956	22268985	protein_coding	Fam3c	exon	ENSMUSG00000029672	ProperStrand	13	chr3	123210854	123210979	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-4.8751
chr12	110874223	110874277	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	chr3	68889059	68889149	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-0.7220
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr15	77597977	77597993	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	3	-2.6670
chr5	143667012	143667072	protein_coding	Actb	exon	ENSMUSG00000029580	ProperStrand	446	chr17	13897771	13940947	protein_coding	Mllt4	exon	ENSMUSG00000068036	ProperStrand	156	1	-7.3897
chr17	45704047	45704063	protein_coding	Slc35b2	exon	ENSMUSG00000037089	NonProperStrand	9	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	2	-15.4877
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-2.3321
chr2	18713470	18713560	LINE	L1VL1	L1	chr2L1VL118713241	ProperStrand	1	chr2	18713177	18713267	LINE	L1_Mus3	L1	chr2L1_Mus318708702	ProperStrand	1	1	-inf
chr3	127243536	127243756	protein_coding	Larp7	exon	ENSMUSG00000027968	ProperStrand	3	chr16	23110902	23110992	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr11	97043864	97043933	protein_coding	Kpnb1	intron	ENSMUSG00000001440	ProperStrand	197	chr10	79518817	79518841	protein_coding	Gpx4	exon	ENSMUSG00000075706	ProperStrand	55	1	-11.1038
chr5	21292647	21292664	protein_coding	Psmc2	exon	ENSMUSG00000028932	ProperStrand	27	chr8	73419657	73419778	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-11.1252
chr5	100855902	100855964	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr2	30172737	30177411	protein_coding	Nup188	exon	ENSMUSG00000052533	ProperStrand	96	1	-5.7124
chr7	135689885	135689906	protein_coding	Bag3	exon	ENSMUSG00000030847	ProperStrand	35	chr7	151637938	151638032	protein_coding	Cttn	exon	ENSMUSG00000031078	ProperStrand	33	6	-19.9451
chr17	79251939	79252029	protein_coding	Eif2ak2	utr3	ENSMUSG00000024079	ProperStrand	11	chr8	32260344	32260424	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-8.0215
chr18	63109676	63109692	protein_coding	Apcdd1	exon	ENSMUSG00000071847	NonProperStrand	254	chr5	121655100	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-1.3313
chr9	121678095	121678111	protein_coding	Zfp651	utr3	ENSMUSG00000013419	NonProperStrand	20	chr17	35089181	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-7.6750
chr13	96102558	96102638	protein_coding	Zbed3	intron	ENSMUSG00000041995	ProperStrand	33	chr13	96102622	96102712	snoRNA	ENSMUSG00000077380_SNORA68	.	ENSMUSG00000077380	ProperStrand	51	1	-14.8410
chr9	59523375	59523402	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr11	62418018	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	3	-1.9843
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr19	28730312	28730329	protein_coding	Glis3	intron	ENSMUSG00000052942	ProperStrand	14	1	-9.8693
chr17	46812045	46812061	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr17	46820413	46820475	protein_coding	Ppp2r5d	utr3	ENSMUSG00000059409	ProperStrand	97	1	-8.2693
chr18	61743255	61743278	protein_coding-noncoding	Csnk1a1	utr5	ENSMUSG00000024576	ProperStrand	5	chr18	63908609	63908625	protein_coding	Wdr7	intron	ENSMUSG00000040560	NonProperStrand	180	1	-16.2653
chr9	108961386	108961711	protein_coding	Trex1	utr5	ENSMUSG00000049734	ProperStrand	1	chr1	162965564	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-inf
chr2	125191284	125191300	protein_coding	Fbn1	exon	ENSMUSG00000027204	ProperStrand	38	chr2	22444720	22444792	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-8.6927
chr10	24613572	24613662	protein_coding	Med23	exon	ENSMUSG00000019984	ProperStrand	7	chr10	90581059	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-9.1626
chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	chr7	52382755	52382832	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-2.8381
chr6	124697779	124697858	protein_coding	Atn1	exon	ENSMUSG00000004263	ProperStrand	20	chr17	51059907	51059924	protein_coding	Tbc1d5	exon	ENSMUSG00000023923	NonProperStrand	51	7	-inf
chr11	120146715	120146897	protein_coding	Bahcc1	exon	ENSMUSG00000039741	ProperStrand	118	chrX	34622906	34622930	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-3.6296
chr19	8799829	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	chr1	162967137	162967178	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	2	-1.9992
chr15	76912118	76912140	protein_coding	Rbfox2	utr3	ENSMUSG00000033565	ProperStrand	55	chr7	116663695	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-4.6668
chrX	149476535	149476553	lincRNA	9530051G07Rik	intron	ENSMUSG00000085982	NonProperStrand	1	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr4	122968631	122968721	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	NonProperStrand	2	chr12	106269454	106269534	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	NonProperStrand	38	1	-inf
chr9	120039898	120040587	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	chr11	69483136	69483209	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	5	-2.2096
chr11	75313499	75313656	protein_coding	Prpf8	utr3	ENSMUSG00000020850	ProperStrand	255	chr19	8963032	8963048	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-7.2680
chr4	131866224	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	chr2	26768049	26768084	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	3	-1.1151
chr13	45015731	45015767	protein_coding	Jarid2	utr3	ENSMUSG00000038518	ProperStrand	372	chr7	13594771	13594787	protein_coding	Zbtb45	intron	ENSMUSG00000049600	ProperStrand	16	1	-12.3438
chr11	51418197	51418277	protein_coding	Hnrnpab	exon	ENSMUSG00000020358	ProperStrand	124	chr2	26493366	26493456	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-2.4454
chr13	68759738	68764669	protein_coding	Adcy2	exon	ENSMUSG00000021536	ProperStrand	237	chr2	26494708	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-1.9075
chr9	7794132	7794152	protein_coding	Tmem123	utr3	ENSMUSG00000050912	ProperStrand	17	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-10.2790
chr11	48613871	48613903	protein_coding	Gnb2l1	utr5	ENSMUSG00000020372	ProperStrand	347	chr7	106631403	106631439	snoRNA	ENSMUSG00000065822_Snord15a	.	ENSMUSG00000065822	ProperStrand	128	1	-8.2809
chr13	113296074	113296096	protein_coding	Il6st	utr3	ENSMUSG00000021756	ProperStrand	34	chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	1	-9.2512
chr11	62133035	62270331	protein_coding	Ncor1	intron	ENSMUSG00000018501	ProperStrand	132	chr5	130300415	130300522	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	4	-5.4980
chr2	168581339	168582246	protein_coding	Sall4	exon	ENSMUSG00000027547	ProperStrand	82	chr7	29136611	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-3.3865
chr12	25396353	25396382	protein_coding	Rrm2	exon	ENSMUSG00000020649	ProperStrand	65	chr12	88488443	88496424	protein_coding	Pomt2	exon	ENSMUSG00000034126	NonProperStrand	331	1	-9.7306
chr2	26494708	26494808	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	chr1	173041607	173041649	tRNA	tRNA710-ValCAC	.	1661655	ProperStrand	206	1	-1.1385
chr5	122681971	122682061	protein_coding	Hvcn1	intron	ENSMUSG00000064267	ProperStrand	182	chr9	15118246	15118326	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-1.5919
chr3	142351261	142351279	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr9	103401280	103401296	protein_coding	Tmem108	exon	ENSMUSG00000042757	NonProperStrand	323	1	-4.4994
chrX	20252711	20252834	protein_coding	Uba1	exon	ENSMUSG00000001924	ProperStrand	156	chr18	35716741	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-2.7294
chr9	43047662	43047678	protein_coding	Oaf	utr5	ENSMUSG00000032014	NonProperStrand	11	chr17	24856641	24856731	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-9.8668
chr2	29667156	29671842	protein_coding	Slc27a4	exon	ENSMUSG00000059316	ProperStrand	24	chr2	26494708	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	3	-11.5621
chr6	122657927	122661609	protein_coding	Nanog	exon	ENSMUSG00000012396	ProperStrand	66	chr14	66472993	66473011	protein_coding	Ccdc25	exon	ENSMUSG00000022035	ProperStrand	15	2	-20.8600
chr18	10052128	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr13	100761206	100761226	protein_coding	Mccc2	exon	ENSMUSG00000021646	ProperStrand	29	2	-16.2004
chr8	73201997	73202284	protein_coding	Lsm4	exon	ENSMUSG00000031848	NonProperStrand	1	chr16	23110965	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	NonProperStrand	93	1	-inf
chr2	86138158	86138174	protein_coding	Olfr1052	exon	ENSMUSG00000047149	NonProperStrand	119	chr2	42028705	42028723	protein_coding	Lrp1b	intron	ENSMUSG00000049252	NonProperStrand	39	1	-12.8069
chr2	113679957	113679974	protein_coding	Arhgap11a	exon	ENSMUSG00000041219	ProperStrand	47	chr17	35087945	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-5.6775
chr11	12137787	12137877	protein_coding	Cobl	utr3	ENSMUSG00000020173	ProperStrand	133	chr11	75318637	75318717	protein_coding	Prpf8	utr3	ENSMUSG00000020850	ProperStrand	255	1	-8.8176
chr16	72800514	72800532	protein_coding	Robo1	intron	ENSMUSG00000022883	NonProperStrand	188	chr15	79908930	79908956	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-3.3103
chr11	116401340	116401430	protein_coding	Ube2o	exon	ENSMUSG00000020802	ProperStrand	134	chr8	129468791	129468871	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-2.9305
chr7	28154412	28154502	protein_coding	Spnb4	exon	ENSMUSG00000011751	ProperStrand	39	chr7	116664809	116664889	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-5.6891
chr19	8963172	8963255	miRNA	Mir5136	.	ENSMUSG00000093314	ProperStrand	45	chr19	8963023	8963140	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	9	-inf
chrX	20240219	20240248	protein_coding	Uba1	utr5	ENSMUSG00000001924	ProperStrand	156	chr2	181086352	181086532	protein_coding	Rtel1	exon	ENSMUSG00000038685	ProperStrand	22	1	-13.4319
chr10	80291773	80291811	protein_coding	Oaz1	utr3	ENSMUSG00000035242	ProperStrand	49	chr2	158184092	158184136	snoRNA	ENSMUSG00000064995_SNORA71	.	ENSMUSG00000064995	ProperStrand	430	2	-15.4395
chr16	23110453	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	chr9	64143736	64143877	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	8	-0.9792
chr8	89329363	89329453	SINE	ID_B1	B4	chr8ID_B189329348	ProperStrand	1	chr8	89329201	89329291	Simple_repeat	(TTCC)n	Simple_repeat	chr8(TTCC)n89329185	NonProperStrand	1	1	-inf
chr19	44157136	44158947	protein_coding	Chuk	utr3	ENSMUSG00000025199	ProperStrand	9	chr3	123210899	123210979	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.6210
chr3	81957416	81957434	LINE	Lx4B	L1	chr3Lx4B81957352	ProperStrand	1	chr5	121655051	121655151	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-inf
chr11	105801480	105801617	protein_coding-noncoding	Cyb561	utr3	ENSMUSG00000019590	NonProperStrand	2	chr11	105801224	105801305	protein_coding	Cyb561	intron	ENSMUSG00000019590	NonProperStrand	5	2	-inf
chr14	76103087	76103125	protein_coding	Cog3	utr3	ENSMUSG00000034893	ProperStrand	37	chr17	15158634	15158694	protein_coding	Gm3435	intron	ENSMUSG00000073455	ProperStrand	5	5	-inf
chr2	103557742	103557842	protein_coding	Abtb2	utr3	ENSMUSG00000032724	ProperStrand	12	chr4	131908236	131908292	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.2270
chr19	5801683	5801724	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr11	110153702	110153723	protein_coding	Abca5	intron	ENSMUSG00000018800	ProperStrand	4	1	-13.2124
chr10	62802344	62802360	protein_coding	Sirt1	intron	ENSMUSG00000020063	NonProperStrand	116	chr17	35087945	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-3.9409
chr2	103880824	103880915	snoRNA	ENSMUSG00000087739_SCARNA21	.	ENSMUSG00000087739	ProperStrand	50	chr17	35087895	35087962	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-5.5561
chr15	76175504	76175552	protein_coding	Cyc1	exon	ENSMUSG00000022551	ProperStrand	47	chr10	6450631	6450649	protein_coding	Plekhg1	intron	ENSMUSG00000040624	NonProperStrand	75	1	-13.3615
chr2	26493394	26493484	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr1	87983916	87983996	snoRNA	ENSMUSG00000077274_SNORA26	.	ENSMUSG00000077274	ProperStrand	361	1	-0.8747
chr11	52920056	52920072	protein_coding	Fstl4	intron	ENSMUSG00000036264	ProperStrand	27	chr19	8963118	8963181	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.6995
chr16	23111373	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	chr2	144091832	144091932	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	ProperStrand	549	16	-3.9630
chr11	4115356	4115407	protein_coding	Tbc1d10a	utr3	ENSMUSG00000034412	ProperStrand	8	chr9	120038545	120038635	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-6.9869
chr6	148303232	148303252	protein_coding	Rps4y2	exon	ENSMUSG00000063171	ProperStrand	47	chr4	131908809	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-2.9428
chr14	65133966	65133982	LINE	L1MB2	L1	chr14L1MB265133757	NonProperStrand	1	chr11	55296278	55296297	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-inf
chr16	22572859	22572876	protein_coding	Dgkg	intron	ENSMUSG00000022861	NonProperStrand	39	chr14	76247712	76247780	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-4.9994
chr11	94463010	94463047	protein_coding	Acsf2	exon	ENSMUSG00000076435	ProperStrand	34	chr7	116663718	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.5282
chr6	87769189	87769558	protein_coding	Isy1	exon	ENSMUSG00000030056	ProperStrand	172	chr7	149170854	149171340	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	1	-9.1366
chr1	93855013	93855999	protein_coding	Hdac4	exon	ENSMUSG00000026313	ProperStrand	27	chr18	35716740	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.5820
chr7	97576544	97576560	protein_coding	Ccdc89	utr3	ENSMUSG00000044362	NonProperStrand	1	chr8	73419649	73419726	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-inf
chr11	69728871	69729167	protein_coding	Gps2	exon	ENSMUSG00000023170	ProperStrand	2	chr5	143648750	143650352	protein_coding	Fbxl18	exon	ENSMUSG00000066640	ProperStrand	64	1	-21.7207
chr4	43505818	43505898	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr7	34981557	34981647	protein_coding	Pdcd2l	exon	ENSMUSG00000002635	ProperStrand	4	1	-8.5468
chr16	87419211	87419275	snoRNA	ENSMUSG00000065647_SNORA2	.	ENSMUSG00000065647	ProperStrand	123	chr17	35088957	35088995	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-4.4773
chr6	142439080	142439096	protein_coding	Ldhb	exon	ENSMUSG00000030246	NonProperStrand	63	chr18	35716764	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.0896
chr11	87862564	87862654	protein_coding	Srsf1	exon	ENSMUSG00000018379	ProperStrand	49	chr9	15119673	15119753	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	9	-inf
chr10	93507545	93507635	protein_coding	Fgd6	exon	ENSMUSG00000020021	ProperStrand	15	chrX	34622991	34623032	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-5.8363
chr16	44085913	44086005	protein_coding	Atp6v1a	utr3	ENSMUSG00000052459	ProperStrand	79	chr16	23111451	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.9045
chr5	3693225	3693243	protein_coding	Ankib1	exon	ENSMUSG00000040351	NonProperStrand	98	chr11	106362338	106362383	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-4.8876
chr17	46301741	46301965	protein_coding	Gtpbp2	exon	ENSMUSG00000023952	ProperStrand	21	chr7	117190023	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-5.3375
chr8	108413056	108413091	protein_coding	Edc4	exon	ENSMUSG00000036270	ProperStrand	34	chr7	117189864	117189922	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-7.3395
chr9	108477709	108477747	protein_coding	Wdr6	exon	ENSMUSG00000066357	ProperStrand	30	chrX	71517909	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-7.9306
chr8	108469572	108469784	protein_coding	Slc12a4	exon	ENSMUSG00000017765	ProperStrand	25	chr3	133151676	133177017	protein_coding	Tet2	utr5	ENSMUSG00000040943	ProperStrand	192	1	-12.7534
chr2	57279699	57279779	LINE	L1_Mus1	L1	chr2L1_Mus157279631	NonProperStrand	1	chr2	57279884	57279974	LINE	Lx2B	L1	chr2Lx2B57279801	NonProperStrand	1	1	-inf
chr5	135132774	135132790	protein_coding	Limk1	utr3	ENSMUSG00000029674	NonProperStrand	4	chr4	131866184	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	3	-inf
chr4	131866238	131866292	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	chr12	110918156	110918215	snoRNA	ENSMUSG00000065749_AF357428	.	ENSMUSG00000065749	ProperStrand	218	2	-2.7805
chr7	136748736	136749287	protein_coding	Wdr11	exon	ENSMUSG00000042055	ProperStrand	24	chr18	74938044	74938102	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	ProperStrand	1022	1	-9.4941
chr3	122334697	122334715	SINE	B3	B2	chr3B3122334636	NonProperStrand	2	chr15	79129331	79129347	protein_coding	Pla2g6	intron	ENSMUSG00000042632	NonProperStrand	9	1	-inf
chr11	33061204	33062922	protein_coding	Npm1	exon	ENSMUSG00000057113	ProperStrand	352	chr10	110918560	110918650	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	3	-2.4945
chr8	96913458	96914660	protein_coding	Herpud1	exon	ENSMUSG00000031770	ProperStrand	10	chr3	123210872	123210962	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.4047
chr11	72254907	72254997	protein_coding	Mybbp1a	exon	ENSMUSG00000040463	ProperStrand	279	chr17	39985169	39985257	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	2	-5.2105
chr8	91106344	91106360	protein_coding	Nkd1	intron	ENSMUSG00000031661	ProperStrand	57	chr8	73419764	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.2230
chr14	121584055	121584078	protein_coding	Farp1	intron	ENSMUSG00000025555	NonProperStrand	7	chr9	120039624	120039680	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-7.5792
chr18	10052133	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr11	62032911	62032928	protein_coding	Specc1	utr3	ENSMUSG00000042331	NonProperStrand	11	1	-12.2622
chr4	43505782	43505872	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr9	21390936	21390960	protein_coding	Carm1	exon	ENSMUSG00000032185	ProperStrand	82	17	-22.2417
chr15	58884095	58884113	protein_coding	Mtss1	intron	ENSMUSG00000022353	NonProperStrand	51	chr8	96498668	96498686	protein_coding	Amfr	exon	ENSMUSG00000031751	ProperStrand	26	1	-15.3339
chr1	58514634	58514650	protein_coding	Nif3l1	exon	ENSMUSG00000026036	ProperStrand	5	chr8	73419683	73419774	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-13.3027
chr14	76247751	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	chr5	111121064	111121199	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	8	-1.9308
chr13	38283430	38283447	protein_coding	Dsp	exon	ENSMUSG00000054889	NonProperStrand	4	chr7	29136543	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-7.7378
chr11	102294588	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chrX	93136011	93136027	protein_coding	Las1l	exon	ENSMUSG00000057421	ProperStrand	248	1	-6.0775
chr15	82005705	82005747	protein_coding	Srebf2	exon	ENSMUSG00000022463	ProperStrand	592	chr11	62590601	62590631	snoRNA	ENSMUSG00000064692_SNORA67	.	ENSMUSG00000064692	ProperStrand	185	1	-6.4943
chr17	45578090	45578110	lincRNA	B230354K17Rik	exon	ENSMUSG00000073393	ProperStrand	11	chr6	119309506	119309522	protein_coding	Adipor2	exon	ENSMUSG00000030168	NonProperStrand	1	1	-inf
chr4	125863758	125863793	protein_coding	Thrap3	exon	ENSMUSG00000043962	ProperStrand	84	chr17	35089183	35089227	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-4.8324
chr15	82685498	82685514	protein_coding	Tcf20	exon	ENSMUSG00000041852	ProperStrand	658	chr11	106362304	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-1.5398
chr5	31495703	31495796	protein_coding	Snx17	utr5	ENSMUSG00000029146	ProperStrand	5	chr10	23505189	23505209	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-5.7809
chr12	39229089	39229108	protein_coding	Dgkb	intron	ENSMUSG00000036095	ProperStrand	19	chr19	8800375	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-5.7475
chr2	163841078	163841876	protein_coding	Ywhab	exon	ENSMUSG00000018326	ProperStrand	33	chr2	144087368	144087448	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-7.7387
chr5	122022042	122022169	protein_coding	Aldh2	exon	ENSMUSG00000029455	ProperStrand	108	chr17	24665479	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	3	-9.3579
chr9	108431217	108431241	protein_coding	Qrich1	exon	ENSMUSG00000006673	ProperStrand	30	chr9	120039567	120039657	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-4.6242
chr4	52463907	52464116	protein_coding	Smc2	exon	ENSMUSG00000028312	ProperStrand	50	chr15	96247615	96248605	protein_coding	Scaf11	exon	ENSMUSG00000033228	ProperStrand	37	5	-inf
chr17	27220488	27238104	protein_coding	Itpr3	exon	ENSMUSG00000042644	ProperStrand	137	chr11	69483136	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-3.6334
chr14	32041453	32041471	protein_coding	Sema3g	utr3	ENSMUSG00000021904	ProperStrand	7	chr13	46862887	46863013	snoRNA	ENSMUSG00000064558_SNORA55	.	ENSMUSG00000064558	ProperStrand	187	7	-inf
chr18	75161572	75161596	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	chr1	162968212	162968268	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-1.2994
chr12	7494258	7494274	SINE	B4A	B4	chr12B4A7494223	ProperStrand	15	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-12.1874
chr2	90235291	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr12	112776738	112777659	protein_coding	Eif5	utr5	ENSMUSG00000021282	ProperStrand	125	1	-3.1001
chr8	112580122	112580139	LINE	L1M2	L1	chr8L1M2112580080	ProperStrand	1	chr12	17552960	17552995	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-inf
chr5	52776890	52776970	LINE	L1Md_F2	L1	chr5L1Md_F252776882	ProperStrand	1	chr4	77018843	77018933	protein_coding	Ptprd	intron	ENSMUSG00000028399	ProperStrand	198	1	-inf
chr3	55987230	55987246	protein_coding	Nbea	utr5	ENSMUSG00000027799	NonProperStrand	115	chr7	24713726	24713742	protein_coding	Vmn1r179	exon	ENSMUSG00000046924	NonProperStrand	69	1	-11.7255
chr9	67103843	67106086	protein_coding	Tln2	exon	ENSMUSG00000052698	ProperStrand	79	chr16	23111479	23111505	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.9045
chr17	4082607	4082707	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr1	194571765	194571832	snRNA	ENSMUSG00000064881_U5	.	ENSMUSG00000064881	ProperStrand	187	1	-7.6940
chr2	26493364	26493390	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr11	118133571	118134313	protein_coding	Usp36	exon	ENSMUSG00000033909	ProperStrand	27	2	-12.4858
chr11	33062933	33062998	protein_coding	Npm1	utr5	ENSMUSG00000057113	ProperStrand	352	chr16	38158132	38158222	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	1	-5.1588
chr1	52242186	52242263	protein_coding	Gls	utr3	ENSMUSG00000026103	ProperStrand	56	chr5	115940332	115940364	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	1	-8.8743
chr4	138867205	138867223	protein_coding	Akr7a5	intron	ENSMUSG00000028743	ProperStrand	22	chr16	23110827	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.4786
chr17	4082101	4082134	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr19	8798505	8798557	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-3.8609
chr4	13903638	13903656	lincRNA	Gm11823	intron	ENSMUSG00000086927	ProperStrand	1	chr1	162967490	162967541	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-inf
chr11	117686060	117686076	protein_coding	Tk1	exon	ENSMUSG00000025574	ProperStrand	6	chr9	15118245	15118322	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-8.0740
chr6	124613619	124613669	protein_coding	Lpcat3	intron	ENSMUSG00000004270	ProperStrand	19	chr11	3102744	3102763	protein_coding	Drg1	intron	ENSMUSG00000020457	ProperStrand	19	1	-17.8700
chrX	71469095	71469146	protein_coding	Flna	utr3	ENSMUSG00000031328	ProperStrand	134	chr12	87030317	87049503	protein_coding	Batf	exon	ENSMUSG00000034266	ProperStrand	28	1	-13.2418
chr1	182836743	182836764	protein_coding	Pycr2	exon	ENSMUSG00000026520	ProperStrand	89	chr4	83096007	83096052	protein_coding	Snapc3	exon	ENSMUSG00000028483	ProperStrand	5	1	-17.7780
chr1	95684613	95684639	protein_coding	Atg4b	utr3	ENSMUSG00000026280	ProperStrand	13	chr4	131908688	131908719	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.8088
chr2	91436228	91436337	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	chr16	23109027	23109092	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	2	-3.3931
chr4	83938091	83938107	protein_coding	Bnc2	exon	ENSMUSG00000028487	ProperStrand	76	chr4	116366358	116366438	protein_coding	Prdx1	exon	ENSMUSG00000028691	ProperStrand	41	1	-13.6115
chr8	104510035	104510052	LINE	L1_Rod	L1	chr8L1_Rod104509928	NonProperStrand	26	chr4	132754690	132754828	protein_coding	Wasf2	utr3	ENSMUSG00000028868	ProperStrand	56	4	-19.9127
chr13	55424230	55424291	protein_coding	Prelid1	exon	ENSMUSG00000021486	ProperStrand	19	chr4	131908299	131908357	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.3472
chr15	99329179	99329195	protein_coding	Faim2	utr3	ENSMUSG00000023011	ProperStrand	45	chr7	116664844	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.0553
chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	chr1	162967734	162967788	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	1	-5.7335
chr9	56994956	56994976	protein_coding	Neil1	intron	ENSMUSG00000032298	ProperStrand	7	chr18	75161533	75161555	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	2	-17.9152
chr11	119136228	119136244	protein_coding	Gaa	exon	ENSMUSG00000025579	NonProperStrand	201	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	3	-14.8341
chr11	83217504	83217584	protein_coding	Ap2b1	utr3	ENSMUSG00000035152	ProperStrand	60	chr9	65643244	65675304	protein_coding	Zfp609	utr5	ENSMUSG00000040524	ProperStrand	87	1	-12.5666
chr4	55383140	55383240	protein_coding	Rad23b	exon	ENSMUSG00000028426	ProperStrand	86	chr4	41160815	41160876	protein_coding	Ubap2	utr5	ENSMUSG00000028433	ProperStrand	292	3	-19.1213
chr4	79649953	79649978	pseudogene	Gm11410	.	ENSMUSG00000083219	ProperStrand	47	chr17	24857722	24857781	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.7154
chr13	4196313	4196330	protein_coding	Akr1c13	exon	ENSMUSG00000021213	NonProperStrand	3	chr4	131908826	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-6.9471
chr3	94894545	94894611	snoRNA	ENSMUSG00000064952_SNORD62	.	ENSMUSG00000064952	ProperStrand	75	chr7	29136525	29136624	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-3.6141
chr13	23647296	23647321	protein_coding	Hist1h1d	exon	ENSMUSG00000052565	ProperStrand	78	chr11	62416575	62416627	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-4.6598
chr11	117008535	117008569	protein_coding	Sec14l1	exon	ENSMUSG00000020823	ProperStrand	71	chr14	70787670	70787687	protein_coding	Piwil2	intron	ENSMUSG00000033644	ProperStrand	36	1	-14.0064
chr18	9315138	9315218	protein_coding	Ccny	utr3	ENSMUSG00000024286	ProperStrand	23	chr19	8963081	8963171	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.0031
chr11	88706299	88706389	protein_coding	Akap1	exon	ENSMUSG00000018428	ProperStrand	45	chr19	8800382	8800464	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-4.0675
chr4	135521534	135521550	protein_coding	Gale	exon	ENSMUSG00000028671	ProperStrand	61	chr5	54389948	54389965	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	1	-10.7483
chr9	67737584	67738166	protein_coding	Vps13c	utr3	ENSMUSG00000035284	ProperStrand	69	chr19	8799577	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-6.4898
chr2	126670180	126671815	protein_coding	Trpm7	exon	ENSMUSG00000027365	ProperStrand	34	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.3115
chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	chr5	123601881	123601959	protein_coding	Setd1b	exon	ENSMUSG00000038384	ProperStrand	11	1	-12.7370
chr8	3470928	3475841	protein_coding	1700019B03Rik	utr5	ENSMUSG00000040340	NonProperStrand	1	chr7	116663640	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-inf
chr8	48636465	48636481	protein_coding	Rwdd4a	utr3	ENSMUSG00000031568	NonProperStrand	5	chr5	111121066	111121200	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-11.5748
chr8	48953767	48953867	protein_coding	Wwc2	exon	ENSMUSG00000031563	ProperStrand	37	chr1	162968451	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-7.0387
chr17	31395713	31395788	protein_coding	Rsph1	intron	ENSMUSG00000024033	NonProperStrand	3	chr18	35716840	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-inf
chr10	126532147	126532163	protein_coding	Os9	utr3	ENSMUSG00000040462	NonProperStrand	28	chr3	123210854	123210920	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-5.8327
chrX	71517909	71517956	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	chr7	67123693	67123719	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	2	-5.1137
chr18	60936618	60936690	protein_coding	Rps14	exon	ENSMUSG00000024608	ProperStrand	154	chr9	103401280	103401296	protein_coding	Tmem108	exon	ENSMUSG00000042757	NonProperStrand	323	1	-8.0551
chr18	84559087	84559167	protein_coding	Zfp407	intron	ENSMUSG00000048410	ProperStrand	34	chr2	22444734	22444824	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-8.9170
chr2	116793779	116793813	snRNA	ENSMUSG00000065794_U1	.	ENSMUSG00000065794	ProperStrand	5	chr15	34370545	34370577	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-8.5662
chr6	123089131	123089269	protein_coding	Clec4a2	exon	ENSMUSG00000030148	ProperStrand	44	chr17	35087896	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-5.8073
chr8	89408874	89408890	protein_coding	N4bp1	utr5	ENSMUSG00000031652	ProperStrand	98	chr1	63225253	63225284	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	1	-7.8555
chr5	111714151	111714167	lincRNA	Ttc28	exon	ENSMUSG00000033209	NonProperStrand	36	chrX	99383304	99383334	protein_coding	Rps4x	exon	ENSMUSG00000031320	ProperStrand	139	1	-12.6586
chr1	63638623	63638695	protein_coding	Adam23	intron	ENSMUSG00000025964	ProperStrand	59	chr7	150717298	150717367	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	4	-16.8530
chr11	72256345	72261101	protein_coding	Mybbp1a	exon	ENSMUSG00000040463	ProperStrand	279	chr11	69483148	69483273	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-1.6351
chr14	123362571	123371015	protein_coding	Tmtc4	exon	ENSMUSG00000041594	ProperStrand	3	chr16	23110492	23110572	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-8.5395
chr6	82999207	82999223	protein_coding	Loxl3	exon	ENSMUSG00000000693	ProperStrand	14	chr15	38008463	38008546	protein_coding	Ubr5	utr5	ENSMUSG00000037487	ProperStrand	258	1	-13.3563
chr12	110874243	110874343	lincRNA	Rian	intron	ENSMUSG00000091793	ProperStrand	612	chr13	21259940	21259978	tRNA	tRNA1000-LysTTT	.	748941	ProperStrand	86	3	-17.5416
chr17	27559700	27559717	protein_coding	Grm4	utr3	ENSMUSG00000063239	ProperStrand	147	chr2	26494708	26494765	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.6139
chr15	77597977	77597993	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr7	117703786	117758227	protein_coding	Sbf2	exon	ENSMUSG00000038371	ProperStrand	17	1	-11.3658
chr11	5006321	5006366	protein_coding	Emid1	utr3	ENSMUSG00000034164	ProperStrand	14	chr10	110918557	110918647	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-6.2763
chr18	73693110	73693191	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr14	31827476	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	6	-4.7765
chr4	120212995	120213053	protein_coding	Ctps	utr3	ENSMUSG00000028633	ProperStrand	19	chr9	15119718	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.7702
chr4	132324697	132326549	protein_coding	Rpa2	exon	ENSMUSG00000028884	ProperStrand	8	chr19	8799847	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-9.0214
chr2	26244046	26244491	protein_coding	Sdccag3	utr5	ENSMUSG00000026927	ProperStrand	10	chr19	8963096	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.6521
chr11	96681227	96689164	protein_coding	Nfe2l1	exon	ENSMUSG00000038615	ProperStrand	118	chr16	23111721	23111835	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-1.8851
chr2	90235298	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	144758457	144758474	protein_coding	Vps13d	exon	ENSMUSG00000020220	ProperStrand	59	1	-4.4948
chr8	91384986	91385086	SINE	MIR3	MIR	chr8MIR391385005	NonProperStrand	1	chr16	23110545	23110584	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-inf
chr15	83330453	83330477	protein_coding	Ttll1	exon	ENSMUSG00000022442	ProperStrand	11	chr11	55296251	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	2	-15.3310
chr8	35871094	35871194	protein_coding	Dusp4	exon	ENSMUSG00000031530	ProperStrand	17	chr9	15118334	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	10	-inf
chr2	25429110	25429139	protein_coding	Phpt1	utr3	ENSMUSG00000036504	ProperStrand	2	chr10	23506278	23506326	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-14.3991
chr3	55986988	55987078	protein_coding	Nbea	utr5	ENSMUSG00000027799	ProperStrand	53	chr9	15119648	15119728	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	5	-12.8334
chr2	160786150	160787084	protein_coding	Chd6	exon	ENSMUSG00000057133	NonProperStrand	4	chr4	153557680	153557699	protein_coding	Megf6	intron	ENSMUSG00000057751	ProperStrand	23	1	-18.9843
chr19	4113493	4113524	protein_coding	Pitpnm1	exon	ENSMUSG00000024851	ProperStrand	8	chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	1	-13.3216
chr15	81839289	81839379	protein_coding	Pppde2	intron	ENSMUSG00000022472	ProperStrand	12	chr4	131908357	131908437	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.2270
chr18	24628109	24628136	SINE	B1_Mus1	Alu	chr18B1_Mus124628033	NonProperStrand	1	chr15	102037839	102037939	protein_coding	Zfp740	intron	ENSMUSG00000046897	NonProperStrand	4	1	-inf
chr15	31522403	31522483	protein_coding	Cct5	exon	ENSMUSG00000022234	ProperStrand	116	chr8	73419658	73419748	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.0017
chr6	52589235	52589325	snoRNA	ENSMUSG00000064792_SNORA32	.	ENSMUSG00000064792	ProperStrand	151	chr1	89673511	89673565	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-1.7047
chr4	84075268	84075287	protein_coding	Bnc2	intron	ENSMUSG00000028487	ProperStrand	76	chr7	4762185	4763081	protein_coding	Ube2s	exon	ENSMUSG00000060860	ProperStrand	62	2	-19.9596
chr5	33369261	33369349	protein_coding	Ywhah	exon	ENSMUSG00000018965	ProperStrand	81	chr10	23506278	23506348	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-6.3532
chr1	39958111	40080303	protein_coding	Map4k4	exon	ENSMUSG00000026074	ProperStrand	348	chr19	8963027	8963181	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	10	-7.8219
chr1	34245523	34245576	protein_coding	Dst	utr5	ENSMUSG00000026131	ProperStrand	461	chr16	23110476	23110557	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	4	-1.1431
chr1	192768858	192768983	protein_coding	Angel2	utr3	ENSMUSG00000026634	ProperStrand	23	chr16	23111383	23111415	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.7951
chr11	78331103	78331351	protein_coding	Poldip2	exon	ENSMUSG00000001100	ProperStrand	10	chr11	6428108	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	5	-inf
chr8	86992645	86992665	protein_coding	Cacna1a	intron	ENSMUSG00000034656	NonProperStrand	37	chr7	116663633	116663712	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.3721
chr14	121991158	121994793	protein_coding	Dock9	exon	ENSMUSG00000025558	ProperStrand	38	chr9	120038567	120038647	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.8790
chr2	172693920	172694002	protein_coding	Bmp7	utr3	ENSMUSG00000008999	ProperStrand	22	chr11	97642957	97643047	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	6	-inf
chr7	82915050	82915150	LTR	RLTR19-int	ERVK	chr7RLTR19-int82914796	ProperStrand	5	chr17	24857801	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-7.1522
chr12	92136299	92136317	lincRNA	4930544I03Rik	intron	ENSMUSG00000092100	ProperStrand	6	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-12.4916
chr6	121423179	121423195	protein_coding	Iqsec3	utr5	ENSMUSG00000040797	NonProperStrand	139	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-6.0760
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	108278918	108278934	protein_coding	Orc1	exon	ENSMUSG00000028587	ProperStrand	161	2	-4.6389
chr2	158185577	158185655	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr13	65259660	65259720	snoRNA	ENSMUSG00000089161_SNORA48	.	ENSMUSG00000089161	ProperStrand	28	1	-8.0097
chr1	183751607	183762988	protein_coding	Lbr	intron	ENSMUSG00000004880	ProperStrand	97	chr16	23110899	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-1.0002
chr2	158205318	158205398	snoRNA	ENSMUSG00000064585_SNORA71	.	ENSMUSG00000064585	ProperStrand	418	chr2	26493366	26493455	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-0.7105
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr2	130103751	130103796	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-2.4590
chr2	129998643	129998715	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr5	108334195	108334286	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	8	-9.1297
mmu-miR-2137	0	21	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	chr17	6232006	6232022	protein_coding	Tulp4	exon	ENSMUSG00000034377	NonProperStrand	265	1	-8.5825
chr2	153093018	153093118	protein_coding	Pofut1	utr3	ENSMUSG00000046020	ProperStrand	17	chr9	15119722	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.9895
chr9	100056902	100056982	DNA	MER20	MER1_type	chr9MER20100056865	NonProperStrand	1	chr9	100057316	100057406	LINE	L1MEc	L1	chr9L1MEc100057063	NonProperStrand	1	1	-inf
chr9	120039532	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	chr18	35714143	35714290	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	60	-4.3415
chrX	99624108	99624124	protein_coding	Hdac8	exon	ENSMUSG00000067567	NonProperStrand	2	chr12	112779228	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-12.1663
chr11	77398994	77420766	protein_coding	Taok1	utr5	ENSMUSG00000017291	ProperStrand	41	chr4	131908810	131908864	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.7814
chr17	33767553	33767618	protein_coding	Zfp414	exon	ENSMUSG00000073423	ProperStrand	12	chr9	15119722	15119969	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.6882
chr4	24501686	24520921	protein_coding	Mms22l	intron	ENSMUSG00000045751	ProperStrand	21	chr16	23110892	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	7	-13.7965
chr3	104460868	104460927	protein_coding	Slc16a1	utr3	ENSMUSG00000032902	ProperStrand	48	chr10	6438171	6438187	protein_coding	Plekhg1	intron	ENSMUSG00000040624	NonProperStrand	75	1	-13.3145
chr12	106002200	106002217	protein_coding	Clmn	utr3	ENSMUSG00000021097	ProperStrand	50	chr11	106362639	106362690	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-7.7686
chr8	13416897	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr15	82980100	82980190	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-1.0142
chr11	100343024	100343069	protein_coding	Acly	exon	ENSMUSG00000020917	ProperStrand	183	chr16	23111392	23111505	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	6	-3.1271
chr7	13516142	13516208	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr11	69483136	69483222	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	10	-4.3326
chr8	41578514	41578561	protein_coding	Cnot7	utr3	ENSMUSG00000031601	ProperStrand	19	chr3	152104322	152104343	protein_coding	Zzz3	intron	ENSMUSG00000039068	ProperStrand	26	1	-17.2880
chrX	70922064	70922129	protein_coding	Slc6a8	exon	ENSMUSG00000019558	ProperStrand	47	chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	1	-10.5665
chr12	56509056	56511189	protein_coding	Psma6	exon	ENSMUSG00000021024	ProperStrand	13	chr10	23505543	23505623	protein_coding	Rps12	intron	ENSMUSG00000061983	ProperStrand	309	1	-13.1474
chr1	162968441	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	6	-3.4946
chr11	120682242	120682342	protein_coding	Fasn	exon	ENSMUSG00000025153	ProperStrand	298	chr2	26493366	26493414	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-1.1122
chr13	91062774	91063217	protein_coding	Rps23	utr5	ENSMUSG00000049517	ProperStrand	34	chr4	131865877	131865977	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.7115
chr7	133632432	133632481	protein_coding	Tufm	exon	ENSMUSG00000073838	ProperStrand	28	chr16	23110911	23110961	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-3.6312
chr16	90386836	90386853	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	chr1	145626058	145626148	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	2	-12.3579
chr2	34629908	34630097	protein_coding	Hspa5	exon	ENSMUSG00000026864	ProperStrand	181	chr14	24251850	24251866	protein_coding	Kcnma1	intron	ENSMUSG00000063142	NonProperStrand	104	1	-9.9939
chr14	33005034	33005055	protein_coding-noncoding	Timm23	utr3	ENSMUSG00000013701	ProperStrand	7	chr7	117189876	117189931	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-7.5942
chr5	116011357	116013351	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	chr3	123210854	123210896	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	5	-2.5035
chr4	24555742	24555770	protein_coding	Klhl32	intron	ENSMUSG00000040387	ProperStrand	67	chr1	89673606	89673698	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	2	-5.2866
chr11	67167096	67167112	protein_coding	Myh13	exon	ENSMUSG00000060180	ProperStrand	145	chr1	102076754	102076790	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	1	-7.6728
chr2	90235313	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	155383363	155383379	protein_coding	Sdf4	exon	ENSMUSG00000029076	ProperStrand	20	1	-6.6233
chr2	31924012	31924028	protein_coding	Fam78a	utr3	ENSMUSG00000050592	NonProperStrand	340	chr13	96100639	96100691	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	1	-4.6636
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr5	116388808	116391856	protein_coding	Cit	exon	ENSMUSG00000029516	ProperStrand	45	1	-6.4720
chrX	19683228	19683244	protein_coding	Slc9a7	exon	ENSMUSG00000037341	NonProperStrand	136	chr7	29136525	29136626	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-2.1851
chr11	62416576	62416598	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr11	77995189	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-2.1623
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	112929378	112929396	protein_coding	Skint6	intron	ENSMUSG00000087194	NonProperStrand	35	1	-5.5085
chr15	8319499	8319558	protein_coding	Nipbl	exon	ENSMUSG00000022141	ProperStrand	45	chr9	75293512	75293612	protein_coding	Leo1	exon	ENSMUSG00000042487	ProperStrand	5	1	-18.6972
chr4	57154472	57154489	protein_coding	Epb4.1l4b	intron	ENSMUSG00000028434	NonProperStrand	54	chr4	130305550	130305605	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	1	-10.1215
chr2	8759556	8759573	LINE	Lx	L1	chr2Lx8759488	ProperStrand	36	chr11	62416602	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-6.1698
chr1	94600714	94600731	LINE	L1MB8	L1	chr1L1MB894600394	ProperStrand	25	chr4	133920826	133920843	protein_coding	Extl1	exon	ENSMUSG00000028838	NonProperStrand	7	1	-20.1995
chr2	32563527	32563544	protein_coding	Cdk9	exon	ENSMUSG00000009555	NonProperStrand	49	chr11	32500864	32503675	protein_coding	Stk10	exon	ENSMUSG00000020272	NonProperStrand	73	1	-13.3302
chr6	82867688	82867828	protein_coding	Sema4f	exon	ENSMUSG00000000627	ProperStrand	14	chr8	34726171	34726213	protein_coding	Ppp2cb	exon	ENSMUSG00000009630	ProperStrand	14	1	-inf
chr7	132813991	132816226	protein_coding	Gtf3c1	exon	ENSMUSG00000032777	ProperStrand	161	chr19	8800114	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-5.6592
chr5	92512595	92512657	protein_coding	G3bp2	utr5	ENSMUSG00000029405	ProperStrand	78	chr3	123210889	123210979	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.6540
chr10	89252418	89252441	protein_coding	Uhrf1bp1l	intron	ENSMUSG00000019951	ProperStrand	28	chr4	148561927	148562210	protein_coding	Kif1b	exon	ENSMUSG00000063077	ProperStrand	60	1	-14.8589
chr11	69870769	69870785	protein_coding	Asgr1	exon	ENSMUSG00000020884	NonProperStrand	145	chr9	15119975	15120023	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-5.5145
chr1	36569412	36569429	protein_coding	Cnnm3	exon	ENSMUSG00000001138	ProperStrand	58	chr2	144087350	144087440	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-6.6127
chr13	23852873	23852973	protein_coding	Hist1h4a	exon	ENSMUSG00000060093	ProperStrand	12	chr18	75161537	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-10.4710
chr2	11402905	11402921	protein_coding	Pfkfb3	exon	ENSMUSG00000026773	NonProperStrand	7	chr1	181476979	181476996	protein_coding	Cnst	intron	ENSMUSG00000038949	ProperStrand	40	2	-19.9216
chr4	47948647	47948737	LTR	MLT1J-int	MaLR	chr4MLT1J-int47948494	ProperStrand	1	chr4	47948851	47948931	SINE	B3A	B2	chr4B3A47948847	NonProperStrand	1	1	-inf
chrX	148667863	148667918	protein_coding	Kdm5c	utr5	ENSMUSG00000025332	ProperStrand	139	chr6	85388859	85389669	protein_coding	Smyd5	exon	ENSMUSG00000033706	ProperStrand	107	1	-10.4649
chr3	88359893	88360607	protein_coding	Ubqln4	exon	ENSMUSG00000008604	ProperStrand	49	chr11	114581106	114581206	protein_coding	Ttyh2	utr3	ENSMUSG00000034714	ProperStrand	23	1	-15.6592
chr6	56799668	56799720	protein_coding	Fkbp9	exon	ENSMUSG00000029781	ProperStrand	39	chr7	150717298	150717350	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	3	-14.5772
chr7	117060944	117061034	protein_coding	Dennd5a	exon	ENSMUSG00000035901	ProperStrand	22	chr2	26768404	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-7.6004
chr2	90235285	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr18	76437665	76437686	protein_coding	Smad2	intron	ENSMUSG00000024563	NonProperStrand	4	1	-10.0500
chr11	77632268	77632484	protein_coding	Myo18a	exon	ENSMUSG00000000631	ProperStrand	124	chr15	98356818	98356845	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	5	-20.4417
chr18	80290321	80290341	protein_coding	Pard6g	intron	ENSMUSG00000056214	ProperStrand	7	chr1	173041632	173041649	tRNA	tRNA710-ValCAC	.	840843	ProperStrand	206	1	-15.2780
chr4	155544715	155544779	protein_coding	Agrn	exon	ENSMUSG00000041936	ProperStrand	175	chr3	68889153	68889225	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	2	-2.7725
chr11	115451723	115451739	protein_coding	Gga3	exon	ENSMUSG00000020740	NonProperStrand	50	chr1	162965531	162965559	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.6110
chr13	23790022	23790073	protein_coding	Hist1h4c	exon	ENSMUSG00000060678	ProperStrand	19	chr18	35716830	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-10.4198
chr11	32500864	32503675	protein_coding	Stk10	exon	ENSMUSG00000020272	NonProperStrand	73	chr4	131865855	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.4730
chr1	152268927	152269668	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	chr11	97698373	97698423	protein_coding	Lasp1	utr3	ENSMUSG00000038366	ProperStrand	65	2	-13.8952
chr13	107737212	107737228	protein_coding	Dimt1	utr5	ENSMUSG00000021692	ProperStrand	185	chr6	71832638	71832687	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	2	-5.8971
chr3	70108706	70108727	LINE	Lx9	L1	chr3Lx970108604	NonProperStrand	1	chr1	89673550	89673645	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-inf
chr9	120039398	120039449	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	1	-5.7368
chr6	146261879	146261900	protein_coding	Itpr2	intron	ENSMUSG00000030287	NonProperStrand	42	chr10	23505154	23505204	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.7547
chr1	182792612	182792645	protein_coding	BC031781	exon	ENSMUSG00000038806	ProperStrand	64	chr18	35714187	35714254	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-5.6897
chr4	108278918	108278934	protein_coding	Orc1	exon	ENSMUSG00000028587	ProperStrand	161	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	2	-10.6957
chr12	56700673	56700694	protein_coding	Insm2	exon	ENSMUSG00000045440	NonProperStrand	22	chr7	116663689	116663759	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.3535
chr3	138565975	138566065	protein_coding	Tspan5	utr3	ENSMUSG00000028152	ProperStrand	19	chr9	120038468	120038548	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.2199
chr15	10406271	10406569	protein_coding	Brix1	exon	ENSMUSG00000022247	ProperStrand	32	chr19	8798754	8798812	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-6.0316
chr9	64024961	64024998	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	chr9	120039533	120039617	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	3	-1.5122
chr14	61854944	61854964	protein_coding	Sgcg	intron	ENSMUSG00000035296	ProperStrand	2	chr17	35089195	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	2	-inf
chr1	88247743	88247799	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	chr5	111121145	111121200	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	10	-6.5833
chr7	26078925	26079025	protein_coding	Cic	utr3	ENSMUSG00000005442	NonProperStrand	6	chr16	57391552	57391789	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	1	-15.0491
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr7	106631295	106631407	snoRNA	ENSMUSG00000065822_Snord15a	.	ENSMUSG00000065822	ProperStrand	128	1	-6.2378
chr8	87785068	87785121	protein_coding	Vps35	exon	ENSMUSG00000031696	ProperStrand	27	chr4	131908707	131908797	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-6.6261
chr3	90016606	90016659	protein_coding	Rps27	utr3	ENSMUSG00000090733	ProperStrand	40	chr4	131908237	131908280	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-5.6514
chr17	24497192	24497209	protein_coding	Abca3	intron	ENSMUSG00000024130	ProperStrand	20	chr8	72459750	72459812	protein_coding	Gatad2a	exon	ENSMUSG00000036180	ProperStrand	112	1	-14.2971
chr5	113370707	113370723	protein_coding	Adrbk2	exon	ENSMUSG00000042249	ProperStrand	56	chr16	23111702	23111753	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.0136
chr8	108518694	108518712	protein_coding	Dpep2	intron	ENSMUSG00000053687	ProperStrand	4	chr18	75161533	75161596	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-12.8639
chr2	26811815	26811915	protein_coding-noncoding	Rexo4	utr3	ENSMUSG00000052406	ProperStrand	4	chr2	22924796	22924979	protein_coding	Acbd5	utr5	ENSMUSG00000026781	NonProperStrand	4	3	-inf
chr8	129469382	129469482	protein_coding	Tomm20	intron	ENSMUSG00000058779	ProperStrand	55	chr1	162965573	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.4352
chr15	37313435	37313452	protein_coding	Ncald	intron	ENSMUSG00000051359	ProperStrand	28	chr16	23110529	23110559	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.8373
chr10	68801301	68803285	protein_coding	Cdk1	exon	ENSMUSG00000019942	ProperStrand	42	chr1	162967515	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.1412
chr13	46782479	46782579	protein_coding	Nup153	exon	ENSMUSG00000021374	ProperStrand	69	chr11	69483136	69483192	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	5	-10.6945
chr14	32066237	32066722	protein_coding	Bap1	exon	ENSMUSG00000021901	ProperStrand	12	chr16	23110911	23110991	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.4686
chr18	10802310	10804747	protein_coding	Mib1	exon	ENSMUSG00000024294	ProperStrand	27	chrX	34622940	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-4.6723
chr19	60848613	60858123	protein_coding	Eif3a	exon	ENSMUSG00000024991	ProperStrand	287	chr4	131908689	131908883	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-0.8821
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr2	152656290	152656306	protein_coding	Bcl2l1	utr5	ENSMUSG00000007659	NonProperStrand	29	1	-12.8407
chr11	120151214	120151241	protein_coding	Bahcc1	utr3	ENSMUSG00000039741	ProperStrand	118	chr14	76247753	76247817	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-2.9296
chr7	150885176	150885192	protein_coding	Osbpl5	exon	ENSMUSG00000037606	NonProperStrand	7	chr7	52381762	52381805	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	2	-18.9673
chr7	107476313	107476403	protein_coding	Ppme1	utr3	ENSMUSG00000030718	NonProperStrand	5	chr7	106234430	106234520	protein_coding	Uvrag	intron	ENSMUSG00000035354	ProperStrand	13	1	-19.9979
chr5	111238686	111238740	protein_coding	Ulk1	exon	ENSMUSG00000029512	ProperStrand	92	chr11	43398890	43398964	protein_coding	Ccnjl	exon	ENSMUSG00000044707	ProperStrand	13	1	-15.5787
chr4	86565452	86565494	protein_coding	Acer2	utr3	ENSMUSG00000038007	ProperStrand	8	chr10	110918636	110918687	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-12.1166
chrX	7483294	7483501	protein_coding	Timm17b	exon	ENSMUSG00000031158	ProperStrand	36	chr16	38158200	38158226	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	1	-9.6783
chr10	117227045	117227061	protein_coding	Nup107	exon	ENSMUSG00000052798	NonProperStrand	66	chr1	162967734	162967788	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	1	-10.0556
chr15	99580376	99580456	protein_coding	Lass5	intron	ENSMUSG00000023021	ProperStrand	27	chr5	149693940	149694030	protein_coding	Katnal1	intron	ENSMUSG00000041298	ProperStrand	14	1	-18.0026
chr9	103401280	103401296	protein_coding	Tmem108	exon	ENSMUSG00000042757	NonProperStrand	323	chr7	150717369	150717426	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-2.3932
chr15	78982035	78982051	protein_coding	Polr2f	exon	ENSMUSG00000033020	NonProperStrand	71	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-10.4247
chr10	4741155	4741171	protein_coding	Myct1	utr3	ENSMUSG00000046916	ProperStrand	42	chr4	131865867	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.3470
chr14	33153227	33153832	protein_coding	Ogdhl	exon	ENSMUSG00000021913	ProperStrand	182	chr16	16323855	16324068	protein_coding	Dnm1l	exon	ENSMUSG00000022789	NonProperStrand	38	1	-12.0087
chr1	184367039	184367082	protein_coding	Trp53bp2	exon	ENSMUSG00000026510	ProperStrand	19	chr16	23111404	23111494	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	5	-14.2391
chr5	61240896	61240976	LINE	L1Md_F2	L1	chr5L1Md_F261240670	ProperStrand	1	chr5	61241430	61241520	LTR	RMER17A	ERVK	chr5RMER17A61241317	NonProperStrand	1	1	-inf
chr12	86462988	86463027	protein_coding	Dlst	exon	ENSMUSG00000004789	ProperStrand	52	chr1	33828651	33828669	protein_coding	Zfp451	intron	ENSMUSG00000042197	NonProperStrand	393	1	-9.8366
chr17	34085340	34085415	protein_coding	Wdr46	exon	ENSMUSG00000024312	ProperStrand	19	chr6	56665168	56673529	protein_coding	Avl9	exon	ENSMUSG00000029787	ProperStrand	21	10	-19.4533
chr6	90986404	90986450	protein_coding	Nup210	exon	ENSMUSG00000030091	ProperStrand	140	chr18	73693166	73693190	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-3.9013
chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	chr11	68886974	68887038	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-0.9959
chr14	9002812	9002832	protein_coding	Pdhb	exon	ENSMUSG00000021748	ProperStrand	28	chr13	96100592	96100692	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	1	-9.6029
chr6	125112094	125112304	protein_coding	Gapdh	exon	ENSMUSG00000057666	ProperStrand	356	chr2	130101261	130101308	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	5	-13.7528
chr19	7033645	7034317	protein_coding	Plcb3	exon	ENSMUSG00000024960	ProperStrand	111	chr17	71990923	71990999	snoRNA	ENSMUSG00000092713_CT010429.1	.	ENSMUSG00000092713	ProperStrand	182	1	-9.8522
chr19	10620765	10620823	protein_coding	Cpsf7	utr3	ENSMUSG00000034820	ProperStrand	66	chr19	8800356	8800446	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-3.3551
chr2	51901615	51901634	protein_coding	Tnfaip6	intron	ENSMUSG00000053475	NonProperStrand	1	chr19	8799581	8799644	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-inf
chr5	149860356	149860457	protein_coding	Hmgb1	exon	ENSMUSG00000066551	ProperStrand	99	chr11	62418016	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-4.5881
chr6	91707194	91707242	protein_coding	Slc6a6	utr3	ENSMUSG00000030096	ProperStrand	206	chr7	51505883	51505907	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	1	-6.1673
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr11	48614367	48614434	snoRNA	ENSMUSG00000064500_SNORD95	.	ENSMUSG00000064500	ProperStrand	100	2	-9.6235
chr1	102076756	102076791	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	chr18	35716761	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	5	-1.5330
chr6	93127321	93127338	lincRNA	9530026P05Rik	intron	ENSMUSG00000087573	ProperStrand	51	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-3.8950
chr15	34370543	34370678	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	chr3	123210851	123210987	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	195	-inf
chr11	93000162	93000180	protein_coding	Car10	intron	ENSMUSG00000056158	NonProperStrand	7	chr11	62416603	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-15.3216
chr1	127491938	127491955	protein_coding	Slc35f5	utr3	ENSMUSG00000026342	ProperStrand	70	chr11	97643201	97643672	protein_coding	Rpl23	utr5	ENSMUSG00000071415	ProperStrand	920	1	-7.5491
chr7	52714020	52714496	protein_coding	Ftl1	exon	ENSMUSG00000050708	NonProperStrand	7	chr9	120039560	120039650	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	NonProperStrand	24	2	-inf
chr9	20726778	20726812	protein_coding	Dnmt1	exon	ENSMUSG00000004099	ProperStrand	91	chr17	46884450	46884466	protein_coding	Cnpy3	exon	ENSMUSG00000023973	ProperStrand	85	1	-11.7761
chr10	80831348	80831428	protein_coding	Fzr1	exon	ENSMUSG00000020235	ProperStrand	26	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-5.1914
chr19	5801002	5801033	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-1.6716
chr4	133522361	133522380	protein_coding	Hmgn2	exon	ENSMUSG00000003038	ProperStrand	20	chr7	125669399	125670907	protein_coding	Coq7	exon	ENSMUSG00000030652	ProperStrand	3	2	-inf
chr13	45008612	45009076	protein_coding	Jarid2	exon	ENSMUSG00000038518	ProperStrand	372	chr7	148634780	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-0.9968
chr8	73343318	73344429	protein_coding	Il12rb1	exon	ENSMUSG00000000791	ProperStrand	3	chr11	62416956	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-12.3795
chr6	113765841	113765857	protein_coding	Atp2b2	intron	ENSMUSG00000030302	NonProperStrand	14	chr7	108543328	108543385	protein_coding	Arap1	exon	ENSMUSG00000032812	ProperStrand	23	1	-18.1755
chr9	59519818	59523412	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr19	8799595	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-1.2477
chr18	10052128	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr5	140858429	140858476	protein_coding	Snx8	intron	ENSMUSG00000029560	ProperStrand	106	2	-12.2574
chr15	81110991	81111009	SINE	ID4	ID	chr15ID481110956	ProperStrand	272	chr17	56941486	56941509	protein_coding	Rfx2	intron	ENSMUSG00000024206	ProperStrand	32	1	-11.5528
chr4	88920616	88920633	protein_coding	Cdkn2a	utr3	ENSMUSG00000044303	NonProperStrand	1	chr7	19722633	19722649	protein_coding	Fbxo46	utr3	ENSMUSG00000050428	NonProperStrand	24	1	-inf
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr18	74938206	74938315	snoRNA	ENSMUSG00000089235_SCARNA17	.	ENSMUSG00000089235	ProperStrand	1128	1	-3.0464
chr14	22343319	22343409	protein_coding	Myst4	intron	ENSMUSG00000021767	ProperStrand	151	chr10	107800724	107800804	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	1	-6.2401
chr17	24360259	24377727	protein_coding	Ccnf	exon	ENSMUSG00000072082	ProperStrand	149	chr17	24857719	24857841	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-1.9021
chr7	29136525	29136654	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	chr5	74489542	74489679	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	75	-2.4062
chr17	32186371	32186933	protein_coding	Rrp1b	exon	ENSMUSG00000058392	ProperStrand	38	chr4	130305576	130305618	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	1	-10.8305
chr17	47740923	47741225	protein_coding	Bysl	exon	ENSMUSG00000023988	ProperStrand	48	chr5	14252800	14252816	protein_coding	Sema3e	utr3	ENSMUSG00000063531	ProperStrand	125	1	-12.2884
chr4	86466440	86466479	protein_coding	Dennd4c	intron	ENSMUSG00000038024	ProperStrand	42	chr8	113366288	113366322	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	2	-15.6488
chr13	101514268	101514287	protein_coding	Mrps36	intron	ENSMUSG00000061474	ProperStrand	5	chr19	8963027	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-7.1260
chr9	56955244	56955382	protein_coding	Sin3a	exon	ENSMUSG00000042557	ProperStrand	108	chr1	162967515	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	15	-21.0583
chr3	87689184	87689323	protein_coding	Prcc	exon	ENSMUSG00000004895	ProperStrand	38	chr16	23110828	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.5894
chr2	90235324	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	117011597	117011613	protein_coding	Sec14l1	exon	ENSMUSG00000020823	NonProperStrand	5	1	-9.5409
chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	chr9	64023677	64023746	snoRNA	ENSMUSG00000064918_SNORD18	.	ENSMUSG00000064918	ProperStrand	370	1	-5.4651
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr12	104678307	104678323	protein_coding	Ifi27l1	exon	ENSMUSG00000064215	ProperStrand	32	1	-10.1936
chr17	28467624	28467872	protein_coding	Rpl10a	exon	ENSMUSG00000037805	ProperStrand	121	chr1	88247781	88247804	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-3.7628
chr6	83111671	83111687	protein_coding	1700003E16Rik	exon	ENSMUSG00000030030	ProperStrand	352	chr7	28091894	28091960	protein_coding	Ltbp4	exon	ENSMUSG00000040488	ProperStrand	91	1	-8.9336
chr13	9833559	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr7	147130454	147130482	protein_coding	Utf1	exon	ENSMUSG00000047751	ProperStrand	67	2	-7.8526
chr12	8193018	8193108	LINE	L1_Mus3	L1	chr12L1_Mus38192865	NonProperStrand	1	chr12	8193178	8193268	LINE	L1_Mus3	L1	chr12L1_Mus38193037	NonProperStrand	1	1	-inf
chr11	14961829	14961849	LINE	Lx	L1	chr11Lx14961726	ProperStrand	93	chr8	10924953	10924969	protein_coding	3930402G23Rik	utr3	ENSMUSG00000038917	ProperStrand	13	1	-15.5412
chr4	147965854	147965871	protein_coding	Srm	exon	ENSMUSG00000006442	ProperStrand	19	chr8	32260335	32260425	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-6.9002
chr12	58644110	58644129	protein_coding	Foxa1	exon	ENSMUSG00000035451	ProperStrand	25	chr1	162965533	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.9342
chr3	31018908	31018998	protein_coding	Skil	utr3	ENSMUSG00000027660	ProperStrand	23	chr12	60141322	60141402	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-8.7551
chr1	172993122	172993139	protein_coding	Fcgr3	intron	ENSMUSG00000059498	ProperStrand	44	chr7	29136525	29136575	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.9030
chr10	26064051	26064428	protein_coding	L3mbtl3	exon	ENSMUSG00000039089	NonProperStrand	5	chr17	24665420	24665496	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-10.0405
chr4	150538028	150538044	protein_coding	Camta1	exon	ENSMUSG00000014592	ProperStrand	170	chr11	51419870	51419965	protein_coding	Hnrnpab	exon	ENSMUSG00000020358	ProperStrand	124	1	-9.7669
chr15	99454061	99454151	protein_coding	Racgap1	intron	ENSMUSG00000023015	ProperStrand	47	chr4	131866155	131866235	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-6.9211
chr4	148705596	148705663	protein_coding-noncoding	Ube4b	utr3	ENSMUSG00000028960	ProperStrand	1	chr4	56910538	56910628	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-inf
chr17	56210421	56210469	protein_coding-noncoding	Ubxn6	utr3	ENSMUSG00000019578	NonProperStrand	4	chr15	76371908	76371925	protein_coding	Slc52a2	utr3	ENSMUSG00000022560	NonProperStrand	25	1	-19.1451
chr7	116663676	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	chr2	144091745	144091825	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	ProperStrand	549	11	-6.4186
chr12	4872898	4872998	protein_coding-noncoding	Mfsd2b	utr3	ENSMUSG00000037336	ProperStrand	2	chr7	148634812	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-11.3325
chr18	73732805	73732895	protein_coding	Mex3c	exon	ENSMUSG00000037253	ProperStrand	17	chr3	123210858	123210938	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-4.3464
chr10	79150938	79150955	protein_coding	Cdc34	utr3	ENSMUSG00000020307	ProperStrand	30	chr16	23110925	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.0885
chr16	60619933	60620023	LINE	Lx6	L1	chr16Lx660619688	NonProperStrand	1	chr16	60620279	60620359	SINE	B2_Mm2	B2	chr16B2_Mm260620251	ProperStrand	1	1	-inf
chr11	87275979	87285022	snoRNA	ENSMUSG00000070168_U3	.	ENSMUSG00000070168	ProperStrand	3	chr16	23110909	23110989	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr5	74489543	74489584	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr4	145134920	145134972	protein_coding	Gm13242	intron	ENSMUSG00000058186	ProperStrand	6	1	-10.3398
chr2	166890556	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	chr6	125136422	125136468	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	1	-1.2837
chr7	81554650	81554669	protein_coding	Slco3a1	intron	ENSMUSG00000025790	ProperStrand	14	chr8	32260372	32260424	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-7.5228
chr16	16323855	16324068	protein_coding	Dnm1l	exon	ENSMUSG00000022789	NonProperStrand	38	chr1	39605591	39605682	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-8.2583
chr15	27662335	27662352	protein_coding	Trio	exon	ENSMUSG00000022263	NonProperStrand	20	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-7.3950
chr5	130295414	130295470	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	chr10	23506278	23506323	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	2	-0.7310
chr8	87223594	87223612	protein_coding	Trmt1	exon	ENSMUSG00000001909	NonProperStrand	60	chr3	94682869	94682951	protein_coding	Pogz	exon	ENSMUSG00000038902	ProperStrand	65	1	-13.1546
chr2	165963549	165963646	protein_coding	Sulf2	intron	ENSMUSG00000006800	ProperStrand	171	chr16	23111465	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-1.0410
chr6	115757992	115758082	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr3	96528243	96528323	snoRNA	ENSMUSG00000065669_SNORA5	.	ENSMUSG00000065669	ProperStrand	180	1	-3.3886
chr8	13171221	13171275	protein_coding	Lamp1	exon	ENSMUSG00000031447	ProperStrand	92	chr17	35087895	35087946	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-4.3779
chr5	124573599	124573618	protein_coding	Pitpnm2	exon	ENSMUSG00000029406	NonProperStrand	15	chr17	48556189	48556244	protein_coding	AI314976	utr3	ENSMUSG00000040771	ProperStrand	5	1	-20.3414
chr6	149423956	149424036	protein_coding	Bicd1	intron	ENSMUSG00000003452	NonProperStrand	6	chr6	149427154	149427244	protein_coding	Bicd1	intron	ENSMUSG00000003452	ProperStrand	5	1	-19.0115
chr11	106362345	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	chr2	158204033	158204094	snoRNA	ENSMUSG00000065840_SNORA71	.	ENSMUSG00000065840	ProperStrand	107	2	-7.8100
chr9	65578980	65642448	protein_coding	Zfp609	exon	ENSMUSG00000040524	ProperStrand	87	chr16	23110877	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-0.7308
chr4	73975043	73975060	protein_coding	Kdm4c	intron	ENSMUSG00000028397	NonProperStrand	3	chr9	15119631	15119731	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-8.7352
chr4	141587615	141587631	protein_coding	Tmem51	exon	ENSMUSG00000040616	ProperStrand	30	chr3	123210853	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-5.6334
chr1	74622408	74622424	protein_coding	Zfp142	exon	ENSMUSG00000026135	ProperStrand	22	chr11	6519891	6519944	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-9.9675
chr11	102700039	102700115	protein_coding	Eftud2	utr3	ENSMUSG00000020929	ProperStrand	86	chr7	116663713	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	5	-9.6444
chr15	81110991	81111009	SINE	ID4	ID	chr15ID481110956	ProperStrand	272	chr5	108336363	108336411	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-2.1409
chr5	116533108	116533125	protein_coding	Tmem233	exon	ENSMUSG00000079278	NonProperStrand	2	chr3	68889026	68889126	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-10.5388
chr7	29136536	29136562	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	chr13	21264748	21264812	tRNA	tRNA998-LeuCAA	.	1144153	ProperStrand	6	1	-6.8330
chr5	35434249	35441845	protein_coding	Lrpap1	exon	ENSMUSG00000029103	ProperStrand	43	chr7	29136530	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-7.5801
chr9	69972993	69973998	protein_coding	Fam81a	exon	ENSMUSG00000032224	ProperStrand	59	chr14	31827517	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-6.9781
chr6	119870150	119870866	protein_coding	Rad52	exon	ENSMUSG00000030166	ProperStrand	2	chr5	74489644	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-11.1084
chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	chr11	55296223	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-3.4729
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr2	166484322	166484341	protein_coding	Prex1	intron	ENSMUSG00000039621	NonProperStrand	9	1	-12.4764
chr17	38290745	38290764	LTR	MurERV4-int	ERVK	chr17MurERV4-int38290059	ProperStrand	21	chr5	118477951	118477967	protein_coding	Tesc	exon	ENSMUSG00000029359	ProperStrand	114	1	-14.1521
chr15	97214682	97214701	protein_coding	Fam113b	exon	ENSMUSG00000044250	ProperStrand	10	chr12	55796767	55796784	protein_coding	Eapp	utr5	ENSMUSG00000054302	NonProperStrand	62	1	-16.9726
chr17	71193587	71193618	protein_coding	Tgif1	utr3	ENSMUSG00000047407	ProperStrand	64	chr11	69483186	69483276	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.3405
chr2	121949510	121949526	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	chr4	131865380	131865453	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-1.4386
chr1	179958163	179958219	snRNA	ENSMUSG00000065826_U6	.	ENSMUSG00000065826	ProperStrand	3	chr6	71832550	71832577	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-11.9355
chr4	116827117	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	chr10	23505559	23505614	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	2	-3.1562
chr16	57391760	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chrX	98878102	98878138	protein_coding	Ogt	utr3	ENSMUSG00000034160	ProperStrand	49	2	-13.0786
chr10	89282310	89282327	protein_coding	Uhrf1bp1l	utr3	ENSMUSG00000019951	NonProperStrand	55	chr3	89750435	89750451	protein_coding	Atp8b2	exon	ENSMUSG00000060671	ProperStrand	140	1	-11.7869
chr5	137970012	137970124	protein_coding	Gnb2	exon	ENSMUSG00000029713	ProperStrand	23	chr11	55296285	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	5	-19.9261
chr12	84790917	84790997	SINE	B2_Mm2	B2	chr12B2_Mm284790877	NonProperStrand	1	chr5	145677562	145677652	protein_coding	Smurf1	intron	ENSMUSG00000038780	ProperStrand	45	1	-inf
chr15	76023668	76023854	protein_coding	Plec	utr5	ENSMUSG00000022565	ProperStrand	186	chr5	108334245	108336493	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-2.7287
chr4	83102507	83102585	protein_coding	Psip1	utr3	ENSMUSG00000028484	ProperStrand	104	chr11	69483136	69483187	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.5687
chr7	96507009	96507028	protein_coding	Tmem135	intron	ENSMUSG00000039428	NonProperStrand	24	chr18	35716848	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	6	-20.6916
chr1	23549255	23549345	LTR	MTE2b	MaLR	chr1MTE2b23549144	NonProperStrand	1	chr1	23549034	23549124	SINE	B1_Mus1	Alu	chr1B1_Mus123549000	NonProperStrand	1	1	-inf
chr15	89133345	89133445	protein_coding	Sbf1	exon	ENSMUSG00000036529	ProperStrand	85	chr7	150717298	150717350	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-4.8309
chr19	40652097	40652286	protein_coding	Aldh18a1	exon	ENSMUSG00000025007	ProperStrand	19	chr3	123210854	123210979	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-10.1742
chr2	129998672	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-1.2456
chr4	116960878	116991036	protein_coding	Rnf220	intron	ENSMUSG00000028677	ProperStrand	131	chr9	15119646	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-2.6217
chr1	182930032	182931975	protein_coding	Ephx1	exon	ENSMUSG00000038776	ProperStrand	26	chr5	121655035	121655125	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.3544
chr1	137863455	137863472	protein_coding	Igfn1	exon	ENSMUSG00000051985	NonProperStrand	2	chr16	23111389	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-8.0851
chr8	13876097	13876200	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	chr11	62418013	62418091	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	4	-2.9375
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr11	113059709	113059726	lincRNA	2610035D17Rik	intron	ENSMUSG00000087259	NonProperStrand	38	1	-9.6347
chr6	122199663	122199680	LTR	ORR1E	MaLR	chr6ORR1E122199657	ProperStrand	1	chr1	133194959	133195016	protein_coding	Srgap2	exon	ENSMUSG00000026425	NonProperStrand	17	1	-inf
chr10	79219535	79219552	protein_coding	Fgf22	exon	ENSMUSG00000020327	ProperStrand	1	chr11	46080274	46080308	protein_coding	Cyfip2	exon	ENSMUSG00000020340	ProperStrand	28	1	-inf
chr17	35257423	35257462	protein_coding	Csnk2b	utr5	ENSMUSG00000024387	ProperStrand	13	chr1	87983871	87983971	snoRNA	ENSMUSG00000077274_SNORA26	.	ENSMUSG00000077274	ProperStrand	361	3	-inf
chr16	89738138	89738154	LTR	LTR16C	ERVL	chr16LTR16C89737840	NonProperStrand	12	chr7	16524110	16524180	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	1	-13.0018
chr1	155287319	155287354	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	chr12	106269284	106269384	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-0.6992
chr1	64781654	64781744	protein_coding	Fzd5	exon	ENSMUSG00000045005	ProperStrand	175	chr9	120039540	120039620	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	12	-19.3022
chr4	116550090	116550106	protein_coding	Zswim5	exon	ENSMUSG00000033948	NonProperStrand	8	chr7	118219702	118219740	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-8.2090
chr11	63885336	63887052	protein_coding	Cox10	exon	ENSMUSG00000042148	NonProperStrand	187	chr4	132394394	132394418	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	1	-6.8736
chr13	74468870	74468886	protein_coding	Sdha	exon	ENSMUSG00000021577	ProperStrand	70	chr16	23111729	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-3.0816
chr13	113342177	113342193	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	chr9	120037909	120037969	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-0.9134
chr3	96218395	96218451	misc_RNA	Telomerase-vert	.	ENSMUSG00000064796	ProperStrand	443	chr2	181415131	181415148	protein_coding	Tcea2	exon	ENSMUSG00000059540	NonProperStrand	4	1	-14.9939
chr1	158473505	158473595	SINE	B2_Mm2	B2	chr1B2_Mm2158473484	NonProperStrand	1	chr12	112541252	112541332	protein_coding	Cdc42bpb	intron	ENSMUSG00000021279	ProperStrand	128	1	-inf
chr6	124661929	124661952	protein_coding	Emg1	exon	ENSMUSG00000004268	ProperStrand	12	chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-9.7127
chr14	102295788	102297776	protein_coding	Lmo7	exon	ENSMUSG00000033060	ProperStrand	16	chr16	23111431	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-8.8328
chr8	95198374	95198391	protein_coding	Irx6	utr5	ENSMUSG00000031738	ProperStrand	16	chr4	131908753	131908808	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.4136
chr10	79145156	79145182	protein_coding	Cdc34	utr5	ENSMUSG00000020307	ProperStrand	30	chr7	116663665	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-6.3873
chr16	89865588	89867778	protein_coding	Tiam1	exon	ENSMUSG00000002489	ProperStrand	80	chr6	38501668	38501742	protein_coding	Luc7l2	utr5	ENSMUSG00000029823	ProperStrand	85	1	-12.0352
chr9	21203582	21203870	protein_coding	Ilf3	exon	ENSMUSG00000032178	ProperStrand	164	chr2	26767040	26767067	protein_coding	Rpl7a	exon	ENSMUSG00000062647	ProperStrand	234	1	-8.5709
chr4	126044893	126044954	protein_coding	Eif2c3	exon	ENSMUSG00000028842	ProperStrand	8	chr9	120039540	120039630	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-7.2948
chr1	182741988	182742074	protein_coding	H3f3a	utr5	ENSMUSG00000060743	ProperStrand	46	chr19	8963027	8963080	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.7301
chr8	13416896	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr8	121970655	121970671	protein_coding	Necab2	utr5	ENSMUSG00000031837	NonProperStrand	26	1	-8.1274
chr1	4766733	4766823	protein_coding	Mrpl15	exon	ENSMUSG00000033845	ProperStrand	34	chr7	117189963	117190043	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.3973
chr13	95856366	95856384	protein_coding	Pde8b	intron	ENSMUSG00000021684	ProperStrand	43	chr10	23505259	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.7183
chr17	46259776	46262251	protein_coding	Mrps18a	exon	ENSMUSG00000023967	ProperStrand	2	chr12	88778626	88778756	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-13.9398
chr17	69768400	69768417	lincRNA	A930029G22Rik	intron	ENSMUSG00000085144	ProperStrand	3	chr16	23110828	23110884	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr15	34168129	34168151	protein_coding	Laptm4b	exon	ENSMUSG00000022257	ProperStrand	24	chr16	23110931	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.6072
chr18	85120430	85120454	protein_coding	1700034H14Rik	exon	ENSMUSG00000024645	ProperStrand	5	chr12	88488443	88496423	protein_coding	Pomt2	exon	ENSMUSG00000034126	NonProperStrand	331	1	-15.0523
chr10	41644311	41644329	protein_coding	Armc2	exon	ENSMUSG00000071324	ProperStrand	281	chr9	64023228	64023287	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	1	-5.3953
chr18	36806859	36806902	protein_coding	Ankhd1	utr3	ENSMUSG00000024483	ProperStrand	56	chr9	15118256	15118347	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.5938
chr17	39979941	39979987	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr19	3544253	3575655	protein_coding	Ppp6r3	utr5	ENSMUSG00000024908	ProperStrand	63	1	-7.1261
chr16	35945884	35945902	protein_coding-noncoding	Parp9	utr5	ENSMUSG00000022906	NonProperStrand	1	chr19	8800375	8800465	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-inf
chr5	93635109	93635159	protein_coding	Ccni	utr5	ENSMUSG00000063015	ProperStrand	43	chr7	16524110	16524210	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	1	-10.3893
chr10	77459134	77460345	protein_coding	Pfkl	exon	ENSMUSG00000020277	ProperStrand	179	chr11	77995188	77995253	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-4.0720
chr2	164257636	164257652	protein_coding	Sdc4	intron	ENSMUSG00000017009	ProperStrand	177	chr5	121655099	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-1.8681
chr15	76463818	76463892	protein_coding	Tonsl	exon	ENSMUSG00000059323	ProperStrand	8	chr16	23110970	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-5.7082
chr13	21988812	21988833	miRNA	Mir1983	.	ENSMUSG00000088148	ProperStrand	23	chr5	111185239	111185287	protein_coding	Ep400	exon	ENSMUSG00000029505	ProperStrand	176	1	-13.0969
chr11	101645784	101645807	protein_coding-noncoding	Etv4	utr3	ENSMUSG00000017724	NonProperStrand	9	chr13	111015989	111016007	protein_coding	Rab3c	intron	ENSMUSG00000021700	ProperStrand	12	1	-20.0762
chr13	112540780	112541440	protein_coding	Map3k1	exon	ENSMUSG00000021754	ProperStrand	113	chr2	26494767	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.0230
chr2	90235295	90235345	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	173337841	173337857	protein_coding-noncoding	Arhgap30	utr5	ENSMUSG00000048865	NonProperStrand	1	1	-inf
chr2	162893997	162898395	protein_coding	Mybl2	exon	ENSMUSG00000017861	ProperStrand	230	chr5	145532283	145532363	protein_coding	Trrap	intron	ENSMUSG00000045482	ProperStrand	399	1	-6.8417
chr7	135125432	135125460	protein_coding	Fus	utr3	ENSMUSG00000030795	ProperStrand	162	chr14	56337391	56337515	protein_coding	Rabggta	intron	ENSMUSG00000040472	ProperStrand	2	1	-19.2379
chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	chr1	89681292	89681326	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-2.4494
chr15	80790852	80790942	protein_coding	Adsl	exon	ENSMUSG00000022407	ProperStrand	11	chr16	23111706	23111793	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.0138
chr2	13352458	13352517	protein_coding	Cubn	exon	ENSMUSG00000026726	ProperStrand	12	chr16	23110909	23110999	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.4686
chr7	13892898	13892998	protein_coding	Lig1	exon	ENSMUSG00000056394	ProperStrand	89	chr1	162968445	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-5.3073
chr10	80422547	80422635	protein_coding	Gng7	intron	ENSMUSG00000048240	NonProperStrand	6	chr16	23110986	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.7876
chr2	90235295	90235348	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr12	54082968	54082985	protein_coding	Akap6	intron	ENSMUSG00000061603	ProperStrand	9	1	-8.2671
chr19	11853143	11853159	protein_coding	Stx3	utr3	ENSMUSG00000041488	ProperStrand	37	chr8	73419657	73419727	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-6.7795
chrX	71517560	71517635	protein_coding	Rpl10	exon	ENSMUSG00000008682	ProperStrand	71	chr1	162968213	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	10	-21.3747
chrX	151772839	151772856	protein_coding	Prdx4	exon	ENSMUSG00000025289	ProperStrand	29	chr4	131865859	131865983	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-7.7326
chr15	76371554	76371654	protein_coding	Slc52a2	utr3	ENSMUSG00000022560	ProperStrand	16	chr2	130101972	130102047	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-7.9986
chr5	124822739	124822794	protein_coding	Sbno1	utr3	ENSMUSG00000038095	ProperStrand	134	chr18	53845596	53845612	protein_coding	Cep120	exon	ENSMUSG00000048799	ProperStrand	91	1	-10.8631
chr12	88778594	88778694	protein_coding	Alkbh1	intron	ENSMUSG00000079036	ProperStrand	70	chr1	162967512	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-3.1934
chr11	86839660	86839750	LTR	MER57F	ERV1	chr11MER57F86839682	ProperStrand	1	chr11	86839850	86839940	SINE	ID_B1	B4	chr11ID_B186839873	NonProperStrand	1	1	-inf
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr7	54443944	54443969	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-4.4703
chr17	85482653	85489599	protein_coding	Prepl	utr5	ENSMUSG00000024127	ProperStrand	106	chr4	131908357	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.7009
chr17	12893365	12894093	protein_coding	Igf2r	exon	ENSMUSG00000023830	ProperStrand	151	chr1	92689614	92689630	protein_coding	Col6a3	exon	ENSMUSG00000048126	ProperStrand	79	1	-10.9080
chr17	13115723	13115784	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	chr2	130101986	130102056	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	7	-7.4110
chr17	34089006	34089188	protein_coding	Rps18	exon	ENSMUSG00000008668	ProperStrand	111	chr2	83693562	83693578	protein_coding	Fam171b	exon	ENSMUSG00000048388	NonProperStrand	175	1	-9.9305
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr5	118376503	118376519	protein_coding	Nos1	exon	ENSMUSG00000029361	NonProperStrand	237	1	-5.9917
chr4	85016349	85016365	protein_coding	Sh3gl2	intron	ENSMUSG00000028488	NonProperStrand	313	chr6	47974886	47974921	protein_coding	Zfp777	exon	ENSMUSG00000071477	ProperStrand	11	1	-13.4686
chr7	51505821	51505910	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	chr19	12085585	12085607	tRNA	tRNA638-LeuTAA	.	295132	ProperStrand	9	2	-19.8518
chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr18	75161534	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	2	-3.7573
chr5	74489543	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	chr14	51684898	51684921	tRNA	tRNA704-ThrTGT	.	150094	ProperStrand	30	5	-21.3655
chr2	168704988	168705007	LTR	RLTR25B	ERVK	chr2RLTR25B168704923	NonProperStrand	8	chr18	35716812	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-5.9895
chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr2	22444731	22444814	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-1.4481
chr12	110881049	110881108	lincRNA	Rian	intron	ENSMUSG00000091793	ProperStrand	612	chr9	120039587	120039620	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	3	-1.0142
chr14	66342756	66342772	protein_coding	Scara5	intron	ENSMUSG00000022032	ProperStrand	30	chr19	46836213	46836229	protein_coding	Cnnm2	utr5	ENSMUSG00000064105	NonProperStrand	19	1	-16.9968
chr9	67821207	67823597	protein_coding	Vps13c	exon	ENSMUSG00000035284	ProperStrand	69	chr7	117190025	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.0795
chr17	24857694	24857777	protein_coding-noncoding	Rps2	utr5	ENSMUSG00000044533	ProperStrand	29	chr17	24857762	24857856	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	9	-20.2275
chr14	51427251	51427314	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr12	17285335	17285353	protein_coding	Pdia6	exon	ENSMUSG00000020571	ProperStrand	114	2	-9.6592
chr7	26055662	26055692	protein_coding	Cic	intron	ENSMUSG00000005442	ProperStrand	80	chrX	34622906	34622942	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-2.6613
chr5	137963420	137965282	protein_coding	Gigyf1	exon	ENSMUSG00000029714	ProperStrand	49	chr11	62418014	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	4	-18.1834
chr11	3152707	3152807	protein_coding	Drg1	exon	ENSMUSG00000020457	ProperStrand	19	chr7	116663730	116663768	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.6387
chr16	3856861	3856878	protein_coding	Zfp174	utr3	ENSMUSG00000054939	NonProperStrand	166	chr7	51505507	51505594	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	1	-6.7550
chr7	101143794	101143812	LINE	Lx5	L1	chr7Lx5101143426	NonProperStrand	12	chr16	23110966	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.4686
chr4	43505745	43505825	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr17	46789557	46789760	protein_coding	Cul7	exon	ENSMUSG00000038545	ProperStrand	38	1	-3.9117
chr2	139879557	139879657	protein_coding	Tasp1	intron	ENSMUSG00000039033	ProperStrand	6	chr12	17552950	17553005	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-9.7905
chr17	23958236	23958294	protein_coding	Srrm2	utr3	ENSMUSG00000039218	ProperStrand	521	chr2	73200537	73200553	protein_coding	Gpr155	exon	ENSMUSG00000041762	ProperStrand	33	1	-10.1917
chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	chr7	13846274	13846290	protein_coding	6330408A02Rik	utr3	ENSMUSG00000070814	ProperStrand	10	1	-12.4908
chr11	96769235	96769325	protein_coding	Cdk5rap3	utr3	ENSMUSG00000018669	ProperStrand	16	chr2	91436230	91436310	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-10.1721
chr6	47731661	47731716	misc_RNA	Y_RNA	.	ENSMUSG00000064945	ProperStrand	93	chr11	97642988	97643078	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.7575
chr2	132089145	132089161	protein_coding	Cds2	utr5	ENSMUSG00000058793	NonProperStrand	16	chr4	131908805	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-11.8681
chr2	76471660	76471676	protein_coding	Prkra	exon	ENSMUSG00000002731	NonProperStrand	65	chr7	13516173	13516190	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	1	-8.5061
chr16	23110986	23111010	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr16	43886793	43886851	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	1	-3.8912
chr1	166377088	166377178	protein_coding	Atp1b1	intron	ENSMUSG00000026576	ProperStrand	67	chr7	148634704	148634784	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-3.7795
chr8	96820363	96820453	protein_coding	Nup93	exon	ENSMUSG00000032939	ProperStrand	43	chr19	8963096	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.8490
chr1	169298039	169298139	protein_coding	Aldh9a1	utr3	ENSMUSG00000026687	ProperStrand	58	chr14	31827478	31827533	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-7.0121
chr13	76235841	76235859	protein_coding	Arsk	exon	ENSMUSG00000021592	NonProperStrand	2	chr2	118896321	118896421	protein_coding	Casc5	exon	ENSMUSG00000027326	ProperStrand	30	1	-inf
chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	chr9	45753833	45753977	protein_coding	Sidt2	intron	ENSMUSG00000034908	ProperStrand	10	1	-14.1394
chr18	82627805	82627826	SINE	B4	B4	chr18B482627737	ProperStrand	1	chr11	62416950	62417016	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-inf
chr12	17552945	17553087	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr12	112779149	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	20	-8.3396
chr13	13579016	13581357	protein_coding	Nid1	exon	ENSMUSG00000005397	ProperStrand	112	chr7	117166805	117166858	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-3.6361
chr9	58762154	58764838	protein_coding	Neo1	exon	ENSMUSG00000032340	ProperStrand	35	chr1	39605602	39605682	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-8.4238
chr4	137172274	137212310	protein_coding	Usp48	exon	ENSMUSG00000043411	ProperStrand	135	chr16	23110455	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-2.3286
chr7	29171541	29171558	protein_coding	Med29	utr3	ENSMUSG00000003444	NonProperStrand	134	chr12	55797797	55797932	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	3	-14.0028
chr7	140901060	140901150	protein_coding	Bccip	exon	ENSMUSG00000030983	ProperStrand	19	chr11	69483200	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-7.6497
chrX	34667269	34667285	protein_coding	Nkap	exon	ENSMUSG00000016409	NonProperStrand	133	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-10.0878
chrX	117040899	117041451	protein_coding	Pabpc5	utr5	ENSMUSG00000034732	NonProperStrand	24	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-11.2223
chr15	98428804	98428820	protein_coding	Adcy6	exon	ENSMUSG00000022994	ProperStrand	50	chr7	135415590	135415607	protein_coding	Slc5a2	exon	ENSMUSG00000030781	ProperStrand	3	1	-inf
chr19	46355093	46355153	protein_coding	Gbf1	exon	ENSMUSG00000025224	ProperStrand	50	chr5	113919913	113919930	protein_coding	Wscd2	utr5	ENSMUSG00000085571	NonProperStrand	40	1	-14.5019
chr12	104015564	104015607	protein_coding	Ubr7	utr3	ENSMUSG00000041712	ProperStrand	46	chr9	15119968	15120042	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	6	-inf
chr11	115647175	115647255	protein_coding	2310067B10Rik	exon	ENSMUSG00000020747	ProperStrand	74	chr2	26493366	26493455	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-3.3559
chr8	108583645	108583679	protein_coding	Nfatc3	utr5	ENSMUSG00000031902	ProperStrand	75	chr9	106367075	106367092	protein_coding	Gpr62	exon	ENSMUSG00000091735	ProperStrand	5	1	-17.8750
chr16	10152018	10152098	LTR	RLTR4_MM-int	ERV1	chr16RLTR4_MM-int10151038	ProperStrand	1	chr16	11226362	11226452	protein_coding	Gspt1	intron	ENSMUSG00000062203	NonProperStrand	4	1	-inf
chr6	92127984	92128084	protein_coding	Mrps25	intron	ENSMUSG00000014551	ProperStrand	5	chr16	23110888	23110911	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr19	47205280	47205296	protein_coding	Pdcd11	exon	ENSMUSG00000025047	ProperStrand	137	chr19	8799022	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-4.2388
chr19	5758600	5758634	protein_coding	Scyl1	exon	ENSMUSG00000024941	ProperStrand	59	chr15	98350147	98350200	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-4.7929
chr11	94527556	94527574	protein_coding	Xylt2	exon	ENSMUSG00000020868	ProperStrand	65	chr11	69483191	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.3145
chr17	53645657	53645677	protein_coding	Rab5a	exon	ENSMUSG00000017831	ProperStrand	44	chr9	120037999	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-5.3073
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr16	23110455	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-1.8611
chr1	72667074	72667091	protein_coding	Smarcal1	intron	ENSMUSG00000039354	ProperStrand	23	chr16	23111374	23111449	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.7951
chr8	85288349	85288812	protein_coding	Zfp330	exon	ENSMUSG00000031711	ProperStrand	75	chr19	8799037	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-5.3960
chr7	51876139	51876161	protein_coding	Myh14	intron	ENSMUSG00000030739	NonProperStrand	11	chr4	131865380	131865458	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	2	-11.9391
chr3	108228259	108228275	protein_coding	Sars	utr3	ENSMUSG00000068739	NonProperStrand	200	chr5	108336363	108336422	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-2.6580
chr4	43505871	43505905	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr2	37255633	37255660	snoRNA	ENSMUSG00000077756_Snord90	.	ENSMUSG00000077756	ProperStrand	167	1	-1.3977
chr18	38753871	38753919	protein_coding	Spry4	intron	ENSMUSG00000024427	ProperStrand	24	chr16	23110828	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.3518
chr5	124804515	124804531	protein_coding	Cdk2ap1	utr5	ENSMUSG00000029394	ProperStrand	22	chr12	112779158	112779204	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-6.7549
chr6	122685553	122686611	protein_coding	Slc2a3	exon	ENSMUSG00000003153	ProperStrand	682	chr12	118805484	118805564	protein_coding	Rapgef5	intron	ENSMUSG00000041992	ProperStrand	14	1	-11.4085
chr17	67981330	67981346	protein_coding	Lrrc30	exon	ENSMUSG00000073375	NonProperStrand	1	chr9	120039533	120039603	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-inf
chr19	30161730	30161746	protein_coding	Uhrf2	exon	ENSMUSG00000024817	ProperStrand	40	chr4	155068753	155068770	protein_coding	B930041F14Rik	exon	ENSMUSG00000074738	NonProperStrand	1	1	-inf
chr3	103612969	103612986	protein_coding	Dclre1b	exon	ENSMUSG00000027845	ProperStrand	3	chr8	95377135	95377153	protein_coding	Mmp2	utr3	ENSMUSG00000031740	NonProperStrand	2	1	-inf
chr4	15872514	15872530	protein_coding	Decr1	utr5	ENSMUSG00000028223	ProperStrand	1	chr16	57391590	57391722	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	1	-inf
chr19	44188388	44188483	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr5	115608120	115608162	protein_coding	Mlec	utr5	ENSMUSG00000048578	ProperStrand	47	5	-inf
chr9	41791140	41792585	protein_coding	Sorl1	exon	ENSMUSG00000049313	ProperStrand	112	chr7	52381975	52382019	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-5.4848
chr4	148494139	148494155	protein_coding	Dffa	utr3	ENSMUSG00000028974	ProperStrand	55	chr16	23111704	23111775	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.0428
chr9	108467312	108467330	protein_coding	Impdh2	exon	ENSMUSG00000062867	NonProperStrand	2	chr2	26493383	26493483	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-11.0703
chr9	110505426	110505448	protein_coding	Setd2	intron	ENSMUSG00000044791	ProperStrand	51	chr4	131908718	131908808	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.4523
chr2	119783957	119784027	protein_coding	Mga	exon	ENSMUSG00000033943	ProperStrand	180	chr9	20693979	20693998	snoRNA	ENSMUSG00000077702_SNORD105	.	ENSMUSG00000077702	ProperStrand	41	1	-11.8778
chr12	17285675	17285748	protein_coding	Pdia6	exon	ENSMUSG00000020571	ProperStrand	114	chr1	63225612	63225702	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	6	-20.6285
chr7	73843382	73843426	protein_coding	Lins	intron	ENSMUSG00000053091	ProperStrand	4	chr10	23505171	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-6.2798
chr5	30593804	30593820	protein_coding	Ept1	utr3	ENSMUSG00000075703	ProperStrand	18	chr5	130295414	130295458	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-7.6470
chr1	194167110	194167128	protein_coding	Kcnh1	intron	ENSMUSG00000058248	NonProperStrand	9	chr9	15119967	15119998	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-11.1264
chr15	76003523	76003603	protein_coding	Plec	exon	ENSMUSG00000022565	ProperStrand	186	chr1	135539035	135539125	protein_coding	Zc3h11a	intron	ENSMUSG00000026464	ProperStrand	102	1	-9.9781
mmu-miR-6240	1	25	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr1	180885279	180885295	protein_coding	Smyd3	utr3	ENSMUSG00000055067	NonProperStrand	190	1	-3.6955
chr2	163201984	163202001	protein_coding	Jph2	exon	ENSMUSG00000017817	NonProperStrand	4	chr4	108954929	108955013	protein_coding	Eps15	intron	ENSMUSG00000028552	ProperStrand	15	1	-21.2797
chr14	8716372	8717114	protein_coding	Flnb	exon	ENSMUSG00000025278	ProperStrand	124	chr5	65952377	65952395	protein_coding	Ube2k	intron	ENSMUSG00000029203	ProperStrand	289	1	-8.7082
chr13	100181246	100181266	protein_coding	Mrps27	exon	ENSMUSG00000041632	ProperStrand	21	chr16	23110841	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.5481
chr8	125419599	125419689	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	chr1	63225578	63225658	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-3.1430
chr2	29774502	29774542	protein_coding-noncoding	Odf2	utr5	ENSMUSG00000026790	ProperStrand	2	chr11	6428088	6428154	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-10.4671
chr4	154211600	154211691	lincRNA	Gm13113	exon	ENSMUSG00000087012	NonProperStrand	8	chr10	23505153	23505233	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	8	-inf
chr19	9629960	9629978	LTR	RLTR6-int	ERV1	chr19RLTR6-int9624037	ProperStrand	1	chr9	78328211	78328318	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-inf
chr4	107596083	107596100	protein_coding	Cpt2	utr5	ENSMUSG00000028607	NonProperStrand	106	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-8.2306
chr3	88715213	88715230	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr2	18508668	18508717	tRNA	tRNA1947-AsnGTT	.	1796253	ProperStrand	179	2	-8.3645
chr2	90235287	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr14	57676676	57676692	protein_coding	Gja3	utr5	ENSMUSG00000048582	ProperStrand	34	1	-5.5655
chr1	4835150	4835248	protein_coding	Lypla1	utr3	ENSMUSG00000025903	ProperStrand	12	chr5	108333792	108333814	protein_coding	Rpl5	exon	ENSMUSG00000058558	ProperStrand	235	2	-21.1035
chr4	43505657	43505719	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr17	28726890	28726907	protein_coding	Srpk1	utr3	ENSMUSG00000004865	ProperStrand	61	1	-3.0407
chr18	10792917	10792945	protein_coding	Mib1	exon	ENSMUSG00000024294	ProperStrand	27	chr4	137212294	137212310	protein_coding	Usp48	utr3	ENSMUSG00000043411	ProperStrand	135	1	-13.3025
chr15	73014403	73014493	protein_coding	Eif2c2	intron	ENSMUSG00000036698	ProperStrand	154	chr11	69483151	69483231	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.0279
chr4	138125348	138125364	protein_coding	Vwa5b1	exon	ENSMUSG00000028753	NonProperStrand	16	chr12	82825364	82825427	protein_coding	Map3k9	exon	ENSMUSG00000042724	ProperStrand	92	1	-15.1541
chr13	75905623	75905650	protein_coding	Ell2	intron	ENSMUSG00000001542	ProperStrand	110	chr17	57161631	57161731	protein_coding	Khsrp	utr3	ENSMUSG00000007670	ProperStrand	353	14	-inf
chr11	32611956	32620513	protein_coding	Fbxw11	exon	ENSMUSG00000020271	ProperStrand	36	chrX	34622906	34622955	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	4	-13.4093
chr2	168007014	168007651	protein_coding	Adnp	exon	ENSMUSG00000051149	ProperStrand	48	chr16	23110961	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-2.0114
chr8	122046746	122046762	protein_coding	Mbtps1	intron	ENSMUSG00000031835	ProperStrand	81	chr15	79908931	79908955	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-4.8900
chr15	103029921	103030011	protein_coding	Cbx5	utr3	ENSMUSG00000009575	ProperStrand	98	chr5	121655031	121655111	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.8570
chr2	34804610	34811794	protein_coding	Traf1	exon	ENSMUSG00000026875	ProperStrand	1	chr1	162967538	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-inf
chr5	42136455	42136473	Low_complexity	GA-rich	Low_complexity	chr5GA-rich42136449	NonProperStrand	106	chr8	73419657	73419774	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.1479
chr5	144670465	144670555	protein_coding	Aimp2	exon	ENSMUSG00000029610	ProperStrand	10	chr4	132394333	132394418	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	2	-inf
chr3	133149098	133149138	protein_coding	Tet2	exon	ENSMUSG00000040943	ProperStrand	192	chr7	29136525	29136615	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-1.4774
chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	chr15	79908956	79908984	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-0.9981
chr11	60019421	60019511	protein_coding	Srebf1	exon	ENSMUSG00000020538	ProperStrand	24	chr4	131908362	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.9196
chr11	53080611	53080674	protein_coding-noncoding	Hspa4	utr3	ENSMUSG00000020361	ProperStrand	3	chr7	116664872	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-inf
chr7	29348066	29348082	protein_coding	Pak4	exon	ENSMUSG00000030602	ProperStrand	18	chr15	34370591	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-5.8762
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr11	114533057	114533152	protein_coding	Rpl38	exon	ENSMUSG00000057322	ProperStrand	29	1	-10.3712
chr1	88426031	88426100	protein_coding	Ptma	exon	ENSMUSG00000026238	ProperStrand	385	chr8	32260336	32260395	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-1.4065
chr19	40296837	40296876	protein_coding	Pdlim1	utr3	ENSMUSG00000055044	ProperStrand	8	chr16	23110912	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-5.7082
chr11	100414998	100415014	protein_coding	Ttc25	exon	ENSMUSG00000006784	NonProperStrand	119	chr4	122970467	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-6.0599
chr8	85961925	85961941	protein_coding	Scoc	utr5	ENSMUSG00000063253	ProperStrand	23	chr19	8800418	8800470	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-5.3675
chr14	55086926	55086975	protein_coding	Lrp10	exon	ENSMUSG00000022175	ProperStrand	19	chr5	37667536	37667552	protein_coding	Crmp1	exon	ENSMUSG00000029121	ProperStrand	85	1	-14.9347
chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	chr11	106362304	106362337	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-2.3032
chr18	36949559	36949597	protein_coding	Hars2	intron	ENSMUSG00000019143	ProperStrand	8	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	1	-11.1493
chr8	11427556	11427572	protein_coding	Col4a2	exon	ENSMUSG00000031503	ProperStrand	74	chr2	63936035	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-7.4428
chr1	173433196	173433273	protein_coding	B930036N10Rik	utr3	ENSMUSG00000091993	ProperStrand	150	chr5	108336372	108336462	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-5.4314
chr11	116533861	116533892	snoRNA	ENSMUSG00000065640_Snord1c	.	ENSMUSG00000065640	ProperStrand	373	chr15	79908928	79908971	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	3	-5.7534
chr11	75113938	75161731	protein_coding	Rpa1	exon	ENSMUSG00000000751	ProperStrand	37	chr16	23110851	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-4.0730
chr1	155081583	155081626	protein_coding	Lamc1	exon	ENSMUSG00000026478	ProperStrand	239	chr1	162967491	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	3	-3.6978
chr16	31930222	31930312	SINE	B1_Mur2	Alu	chr16B1_Mur231930136	NonProperStrand	1	chr16	31930493	31930583	SINE	B4	B4	chr16B431930423	NonProperStrand	1	1	-inf
chr9	64024938	64024998	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	chr11	62418037	62418089	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-1.7881
chr4	136885030	136888362	protein_coding	Cdc42	exon	ENSMUSG00000006699	ProperStrand	38	chr12	31569324	31569340	protein_coding	Fam150b	utr5	ENSMUSG00000054204	ProperStrand	12	2	-inf
chr2	90235315	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr12	99497602	99497618	protein_coding	Galc	utr5	ENSMUSG00000021003	NonProperStrand	65	1	-4.3101
chr10	79325546	79325606	protein_coding	Ptbp1	exon	ENSMUSG00000006498	ProperStrand	129	chr9	120039626	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	5	-9.8832
chr12	50485931	50485947	protein_coding	Foxg1	exon	ENSMUSG00000020950	NonProperStrand	26	chr18	80408324	80408426	protein_coding	Gm16286	exon	ENSMUSG00000024571	ProperStrand	15	1	-17.7247
chr2	125498911	125498928	protein_coding	Eid1	utr5	ENSMUSG00000091337	ProperStrand	60	chr2	91436228	91436259	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-7.4973
chr19	42078310	42078356	protein_coding	Ubtd1	intron	ENSMUSG00000025171	ProperStrand	14	chr16	23110886	23110919	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-4.0210
chr16	44140050	44140140	protein_coding	Naa50	utr5	ENSMUSG00000022698	ProperStrand	56	chr5	125199662	125199742	protein_coding	Atp6v0a2	intron	ENSMUSG00000038023	ProperStrand	31	3	-19.4809
chr7	129312624	129312714	protein_coding	Plk1	exon	ENSMUSG00000030867	ProperStrand	146	chr2	26493391	26493467	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-2.1729
chr8	87340233	87340249	protein_coding	Dand5	exon	ENSMUSG00000053226	ProperStrand	34	chr4	131908321	131908357	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.3115
chr17	24367289	24386209	protein_coding	Ccnf	exon	ENSMUSG00000072082	ProperStrand	149	chr9	15118332	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-3.4491
chr2	120354329	120356247	protein_coding	Zfp106	exon	ENSMUSG00000027288	ProperStrand	199	chr15	79913299	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-2.9039
chr4	129020397	129024052	protein_coding	Zbtb8os	exon	ENSMUSG00000057572	ProperStrand	15	chr16	19883898	19884021	protein_coding	A930003A15Rik	exon	ENSMUSG00000075330	ProperStrand	93	1	-15.2562
chr8	113701642	113702782	protein_coding	Glg1	exon	ENSMUSG00000003316	ProperStrand	83	chr7	116664793	116664868	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.0079
chr12	88778628	88778721	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	chr8	129468745	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	8	-2.6440
chr2	83500280	83500370	protein_coding	Zc3h15	exon	ENSMUSG00000027091	ProperStrand	37	chr10	116497825	116497905	protein_coding	Cct2	exon	ENSMUSG00000034024	ProperStrand	100	15	-21.3797
chr15	88518668	88518738	protein_coding	Brd1	utr3	ENSMUSG00000022387	ProperStrand	70	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	1	-6.7216
chr2	69036737	69036765	protein_coding-noncoding	Spc25	utr3	ENSMUSG00000005233	ProperStrand	1	chr2	69036697	69036737	protein_coding	Spc25	intron	ENSMUSG00000005233	ProperStrand	4	1	-inf
chr7	31370202	31370337	protein_coding	Wbp7	exon	ENSMUSG00000006307	ProperStrand	180	chr13	8756715	8766306	protein_coding	Adarb2	utr3	ENSMUSG00000052551	ProperStrand	292	1	-7.9453
chr9	120037679	120038493	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	chr17	13112448	13112541	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	6	-9.3996
chr11	84708067	84708083	protein_coding	Myo19	exon	ENSMUSG00000020527	ProperStrand	82	chr19	8800375	8800453	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-5.1277
chr7	28421172	28421284	protein_coding	Akt2	exon	ENSMUSG00000004056	ProperStrand	100	chr14	19102855	19102874	protein_coding	Rpl15	exon	ENSMUSG00000012405	ProperStrand	145	1	-10.5160
chr14	72301755	72301771	SINE	B4	B4	chr14B472301692	NonProperStrand	99	chr5	108336376	108336408	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-3.9281
chr5	119181396	119183992	protein_coding	Med13l	exon	ENSMUSG00000018076	ProperStrand	226	chr11	102294590	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	1	-6.2596
chrX	39264936	39264954	protein_coding	Thoc2	intron	ENSMUSG00000037475	NonProperStrand	3	chr6	125136468	125136548	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	1	-12.7834
chr14	56246261	56246432	protein_coding	Ipo4	exon	ENSMUSG00000002319	ProperStrand	62	chr11	4970378	4970468	protein_coding	Ewsr1	exon	ENSMUSG00000009079	ProperStrand	248	46	-19.2846
chr7	73190789	73190805	protein_coding	Pcsk6	intron	ENSMUSG00000030513	ProperStrand	32	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-9.0024
chr12	113920727	113920744	protein_coding	Zbtb42	utr3	ENSMUSG00000037638	ProperStrand	1	chr17	23961491	23961588	protein_coding	Srrm2	utr3	ENSMUSG00000039218	ProperStrand	521	1	-inf
chr4	134773167	134774502	protein_coding	Clic4	exon	ENSMUSG00000037242	ProperStrand	84	chr19	17900101	17900117	snoRNA	ENSMUSG00000089540_snoU13	.	ENSMUSG00000089540	ProperStrand	99	2	-18.4138
chr14	70117728	70117818	lincRNA	Gm16867	intron	ENSMUSG00000085092	ProperStrand	11	chr4	131865381	131865461	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-7.3625
chr3	89249657	89249734	protein_coding	Pbxip1	intron	ENSMUSG00000042613	ProperStrand	16	chr7	118219574	118219626	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	6	-23.8581
chr1	10029908	10029962	protein_coding	Cspp1	utr5	ENSMUSG00000056763	ProperStrand	37	chr3	68889051	68889151	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-4.1568
chr19	10696931	10697862	protein_coding	Ddb1	exon	ENSMUSG00000024740	ProperStrand	304	chr19	8799032	8799083	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-2.7840
chr12	45453261	45453279	protein_coding	Nrcam	intron	ENSMUSG00000020598	ProperStrand	3	chr11	6428089	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-9.3720
chr10	122002408	122002488	LINE	L1Md_F2	L1	chr10L1Md_F2122002095	NonProperStrand	23	chr4	36139490	36139580	protein_coding	Lingo2	intron	ENSMUSG00000045083	NonProperStrand	10	1	-18.7819
chr10	25221726	25221777	protein_coding	Epb4.1l2	exon	ENSMUSG00000019978	ProperStrand	105	chr3	123210881	123210971	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.2266
chr2	26768049	26768084	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	chr9	64022894	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-3.2735
chr7	148195606	148195622	protein_coding	Ifitm3	utr3	ENSMUSG00000025492	NonProperStrand	20	chr2	25915656	25915672	protein_coding	Nacc2	exon	ENSMUSG00000026932	ProperStrand	98	1	-14.5562
chr5	46083054	46084467	protein_coding	Ncapg	exon	ENSMUSG00000015880	ProperStrand	36	chr1	162967489	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.4356
chr7	150239256	150239374	protein_coding	Cd81	intron	ENSMUSG00000037706	ProperStrand	88	chr2	63936036	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-7.0984
chr11	113551398	113551422	protein_coding	D11Wsu47e	intron	ENSMUSG00000041623	ProperStrand	6	chr11	69481384	69481474	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-7.7824
chr3	94964839	94964882	protein_coding	Sema6c	intron	ENSMUSG00000038777	ProperStrand	30	chr14	76247730	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-5.5134
chr3	36462168	36464159	protein_coding	Exosc9	exon	ENSMUSG00000027714	ProperStrand	3	chr17	24857750	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-8.3442
chr4	63211296	63211313	protein_coding	Atp6v1g1	utr3	ENSMUSG00000039105	NonProperStrand	24	chr12	110889637	110889701	snoRNA	ENSMUSG00000064496_SNORD113	.	ENSMUSG00000064496	ProperStrand	37	3	-inf
chr8	87489929	87489961	protein_coding	Rnaseh2a	utr5	ENSMUSG00000052926	ProperStrand	14	chr16	23111777	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-11.0886
chr6	30618327	30618427	protein_coding	Tsga14	intron	ENSMUSG00000029790	ProperStrand	1	chr16	23110473	23110520	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-inf
chr7	57041565	57041581	protein_coding	Prmt3	exon	ENSMUSG00000030505	ProperStrand	89	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-5.0735
chr3	157729963	157729979	protein_coding	Lrrc40	utr3	ENSMUSG00000063052	ProperStrand	147	chr19	8798740	8798784	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-3.1270
chr8	105389430	105389520	protein_coding	Gm8730	exon	ENSMUSG00000063696	ProperStrand	2	chr5	116010796	116010872	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	2	-inf
chr18	35742428	35742474	protein_coding	Matr3	exon	ENSMUSG00000037236	ProperStrand	90	chr16	23111780	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-2.4811
chr1	58116010	58116028	protein_coding	Aox1	exon	ENSMUSG00000063558	ProperStrand	20	chr6	125136494	125136621	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	1	-8.6476
chr8	72776052	72781673	protein_coding-noncoding	Sugp2	utr5	ENSMUSG00000036054	ProperStrand	2	chr8	72775788	72781379	protein_coding	Sugp2	exon	ENSMUSG00000036054	ProperStrand	33	2	-inf
chr16	33720821	33720911	protein_coding	Heg1	exon	ENSMUSG00000075254	ProperStrand	19	chr8	73419663	73419743	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-8.7871
chr2	90235316	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	43943351	43943367	protein_coding	Reck	intron	ENSMUSG00000028476	NonProperStrand	36	1	-5.4531
chr9	75032187	75032214	protein_coding	Myo5a	exon	ENSMUSG00000034593	ProperStrand	89	chr7	152118581	152118597	protein_coding	Ccnd1	exon	ENSMUSG00000070348	ProperStrand	93	1	-11.6404
chr9	113885440	113885521	protein_coding	Ubp1	utr3	ENSMUSG00000009741	ProperStrand	29	chr2	131073183	131073200	protein_coding	Mavs	utr3	ENSMUSG00000037523	NonProperStrand	7	1	-19.6087
chr10	107770287	107770303	protein_coding	Pawr	exon	ENSMUSG00000035873	ProperStrand	39	chr12	17552970	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	6	-19.3241
chr19	53699470	53699502	protein_coding	Smc3	exon	ENSMUSG00000024974	ProperStrand	61	chr17	24857801	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.2692
chr19	5607734	5607791	protein_coding	Kat5	exon	ENSMUSG00000024926	ProperStrand	20	chr11	101466311	101466350	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	1	-11.0960
chr7	28971414	28971587	protein_coding	Dyrk1b	exon	ENSMUSG00000002409	ProperStrand	3	chr16	23110902	23110982	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr12	17555387	17555644	protein_coding	Odc1	exon	ENSMUSG00000011179	ProperStrand	173	chr7	148634806	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-2.1094
chr7	13516157	13516198	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr3	57450646	57450662	protein_coding	Commd2	exon	ENSMUSG00000036513	ProperStrand	23	1	-10.6039
chr14	72956785	72957520	protein_coding	Fndc3a	exon	ENSMUSG00000033487	ProperStrand	84	chr10	23505541	23505621	protein_coding	Rps12	intron	ENSMUSG00000061983	ProperStrand	309	1	-9.3536
chr12	34583721	34583738	LTR	ORR1B1	MaLR	chr12ORR1B134583535	NonProperStrand	3	chr16	36793175	36793237	protein_coding	Eaf2	utr3	ENSMUSG00000022838	NonProperStrand	6	1	-inf
chr7	80676725	80676842	protein_coding	Chd2	intron	ENSMUSG00000078671	ProperStrand	69	chr11	115274341	115274367	tRNA	tRNA1022-ArgCCT	.	167220	ProperStrand	28	1	-14.5670
chr2	127416745	127416848	protein_coding	Mrps5	intron	ENSMUSG00000027374	ProperStrand	84	chr4	131865381	131865856	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	8	-inf
chr4	131481129	131481178	protein_coding	Epb4.1	utr3	ENSMUSG00000028906	ProperStrand	23	chr7	148634771	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-9.5707
chr11	113513363	113513379	protein_coding	Cog1	exon	ENSMUSG00000018661	NonProperStrand	38	chr7	150252223	150252240	protein_coding	Cd81	exon	ENSMUSG00000037706	ProperStrand	88	1	-13.4665
chr17	29417871	29417888	protein_coding	BC004004	intron	ENSMUSG00000052712	ProperStrand	5	chr1	162965530	162965588	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-8.2678
chr13	96374713	96374729	protein_coding	F2r	exon	ENSMUSG00000048376	NonProperStrand	88	chr4	143486645	143486661	protein_coding	Pramef6	exon	ENSMUSG00000078512	ProperStrand	21	1	-14.6696
chr7	112533562	112533579	protein_coding	Fam160a2	exon	ENSMUSG00000044465	ProperStrand	85	chr3	96132419	96132514	snRNA	ENSMUSG00000075978_U1	.	ENSMUSG00000075978	ProperStrand	132	1	-11.0300
chr17	46814084	46814100	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr10	80644755	80644823	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-2.3062
chr7	120657374	120713437	protein_coding	Far1	utr3	ENSMUSG00000030759	ProperStrand	72	chr9	64022855	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	2	-12.2581
chr12	17552949	17553072	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr5	74489543	74489677	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	31	-9.8426
chr11	96679931	96680031	protein_coding	Nfe2l1	utr3	ENSMUSG00000038615	ProperStrand	118	chr11	58115972	58116006	tRNA	tRNA1911-LeuCAA	.	182144	ProperStrand	165	1	-9.9258
chr6	87603819	87603839	protein_coding	Aplf	exon	ENSMUSG00000030051	ProperStrand	7	chr2	91436228	91436333	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-11.9119
chr1	183283000	183283017	protein_coding	Cnih3	utr5	ENSMUSG00000026514	NonProperStrand	32	chr2	166691309	166692440	protein_coding	Arfgef2	exon	ENSMUSG00000074582	ProperStrand	32	1	-15.8553
chr3	95143879	95143932	protein_coding	Setdb1	exon	ENSMUSG00000015697	ProperStrand	23	chr11	6428059	6428159	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.0081
chr7	136800631	136800649	SINE	RSINE1	B4	chr7RSINE1136800606	ProperStrand	216	chr11	55296277	55296310	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-3.7194
chr2	41199972	41199989	protein_coding	Lrp1b	exon	ENSMUSG00000049252	ProperStrand	376	chr11	98878374	98878456	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-2.8164
chr1	95689314	95689363	protein_coding	Dtymk	utr3	ENSMUSG00000026281	ProperStrand	34	chr11	69481376	69481466	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-7.1409
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	121423179	121423195	protein_coding	Iqsec3	utr5	ENSMUSG00000040797	NonProperStrand	139	1	-2.9113
chr19	44379471	44379498	protein_coding	Scd2	utr3	ENSMUSG00000025203	ProperStrand	219	chr5	72950539	72950555	protein_coding	Nfxl1	utr5	ENSMUSG00000072889	NonProperStrand	21	1	-12.8441
chr14	70842886	70842959	protein_coding	Polr3d	utr5	ENSMUSG00000000776	ProperStrand	16	chr19	53461017	53461034	protein_coding	Smndc1	intron	ENSMUSG00000025024	NonProperStrand	12	1	-20.0643
chr9	21474961	21474997	protein_coding	Smarca4	exon	ENSMUSG00000032187	ProperStrand	196	chr17	35089182	35089233	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	2	-5.5546
chr18	41356147	41356185	miRNA	Mir5097	dead	ENSMUSG00000093361	ProperStrand	221	chr7	148634701	148634785	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	3	-4.8708
chr4	136359869	136359941	protein_coding	Ephb2	intron	ENSMUSG00000028664	ProperStrand	21	chr3	100649244	100649263	protein_coding	Vtcn1	intron	ENSMUSG00000051076	NonProperStrand	3	1	-inf
chr7	133726521	133726538	protein_coding	Cln3	exon	ENSMUSG00000030720	ProperStrand	87	chrX	99380902	99380967	protein_coding	Rps4x	exon	ENSMUSG00000031320	ProperStrand	139	1	-10.8797
chr5	31209856	31209881	protein_coding	Ost4	exon	ENSMUSG00000038803	ProperStrand	8	chr3	85944541	85944608	snoRNA	ENSMUSG00000064390_Rnu73b	.	ENSMUSG00000064390	ProperStrand	164	1	-15.4386
chr14	66774848	66775165	protein_coding	Ptk2b	exon	ENSMUSG00000059456	ProperStrand	7	chr6	124665335	124665425	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	1	-11.3414
chr16	17632483	17632550	protein_coding	Smpd4	intron	ENSMUSG00000005899	ProperStrand	33	chr18	35714145	35714235	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.5702
chr5	7175205	7175295	LTR	MTA_Mm	MaLR	chr5MTA_Mm7175025	NonProperStrand	1	chr11	85873514	85873594	protein_coding	Brip1	utr3	ENSMUSG00000034329	NonProperStrand	3	1	-inf
chr4	82963336	82963375	protein_coding	Ttc39b	intron	ENSMUSG00000038172	ProperStrand	78	chr16	35932620	35932636	protein_coding	Dtx3l	exon	ENSMUSG00000049502	ProperStrand	152	1	-10.9203
chr8	127413180	127413236	protein_coding	Gnpat	utr3	ENSMUSG00000031985	ProperStrand	20	chr5	108334255	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	3	-15.9584
chr2	32100818	32100908	protein_coding-noncoding	Pomt1	utr5	ENSMUSG00000039254	ProperStrand	1	chr2	32100554	32100634	protein_coding	Pomt1	intron	ENSMUSG00000039254	ProperStrand	8	1	-inf
chr10	90579861	90579979	protein_coding	Slc25a3	exon	ENSMUSG00000061904	ProperStrand	74	chr17	24856620	24856707	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-6.0135
chr18	36584109	36584199	protein_coding	Pfdn1	intron	ENSMUSG00000024346	ProperStrand	12	chr17	29275736	29275826	protein_coding	Rab44	intron	ENSMUSG00000064147	NonProperStrand	2	1	-inf
chr3	113827103	113827119	protein_coding	Col11a1	utr3	ENSMUSG00000027966	NonProperStrand	139	chr15	79908957	79909019	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-3.8653
chr12	111874149	111874249	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr2	130103432	130103502	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-3.4533
chr5	36969610	36969684	protein_coding	D5Ertd579e	intron	ENSMUSG00000029190	ProperStrand	43	chr9	30853721	30853772	protein_coding	Zbtb44	intron	ENSMUSG00000047412	ProperStrand	68	2	-inf
chr8	73119080	73119269	protein_coding	Isyna1	exon	ENSMUSG00000019139	ProperStrand	15	chr5	145532360	145532393	protein_coding	Trrap	intron	ENSMUSG00000045482	ProperStrand	399	1	-12.3365
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	20173986	20174004	protein_coding	Clasrp	exon	ENSMUSG00000061028	ProperStrand	11	1	-7.8469
chr7	26169431	26169493	protein_coding	Lipe	exon	ENSMUSG00000003123	ProperStrand	24	chr17	24857767	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	6	-20.2078
chr8	109180848	109181686	protein_coding	Cdh1	exon	ENSMUSG00000000303	ProperStrand	283	chr1	162967547	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-0.9925
chr6	54379743	54379760	lincRNA	9130019P16Rik	exon	ENSMUSG00000073067	ProperStrand	255	chr10	21078147	21078196	protein_coding	Hbs1l	exon	ENSMUSG00000019977	ProperStrand	27	1	-12.0275
chr16	48471164	48471185	protein_coding	Morc1	intron	ENSMUSG00000022652	ProperStrand	28	chr16	23110940	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.1386
chr15	100358955	100358972	protein_coding	Tfcp2	exon	ENSMUSG00000009733	NonProperStrand	77	chr17	24857716	24857799	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.8904
chr1	36136350	36136416	protein_coding	Hs6st1	intron	ENSMUSG00000045216	ProperStrand	63	chr8	13876097	13876187	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	6	-21.7366
chr17	80677562	80677652	protein_coding	Dhx57	exon	ENSMUSG00000035051	ProperStrand	20	chr7	116664814	116664894	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-4.5800
chr19	5719336	5719352	protein_coding	Ehbp1l1	exon	ENSMUSG00000024937	ProperStrand	75	chr4	131908278	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.1121
chr5	138046352	138046375	protein_coding	Pcolce	utr3	ENSMUSG00000029718	ProperStrand	63	chr17	24857781	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.2155
chr11	120421903	120421965	protein_coding	P4hb	utr3	ENSMUSG00000025130	ProperStrand	83	chr11	98878342	98878432	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	4	-17.0071
chr1	88255896	88255926	protein_coding	Ncl	utr5	ENSMUSG00000026234	ProperStrand	1184	chr1	155287315	155287355	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	1	-3.1963
chr5	120941178	120942709	protein_coding	Plbd2	exon	ENSMUSG00000029598	ProperStrand	22	chr11	97642952	97643009	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.3090
chr10	39333166	39333228	antisense	Gm16365	.	ENSMUSG00000086915	ProperStrand	5	chr16	23110861	23110896	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-inf
chr2	129998657	129998706	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr8	119820428	119820478	protein_coding	4933407C03Rik	intron	ENSMUSG00000034390	ProperStrand	48	3	-18.8030
chr12	110892838	110892905	snoRNA	ENSMUSG00000064621_AF357355	.	ENSMUSG00000064621	ProperStrand	60	chr16	23110911	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-0.7998
chr19	5104994	5105084	protein_coding	Rab1b	intron	ENSMUSG00000024870	ProperStrand	133	chr7	34946235	34946315	protein_coding	Uba2	intron	ENSMUSG00000052997	ProperStrand	165	23	-19.3745
chr11	48617430	48617668	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	chr9	15130707	15130745	snoRNA	ENSMUSG00000077506_Scarna9	.	ENSMUSG00000077506	ProperStrand	148	2	-12.7473
chr18	32263317	32263333	protein_coding	Iws1	utr3	ENSMUSG00000024384	ProperStrand	72	chr6	72907639	72907944	protein_coding	Tmsb10	exon	ENSMUSG00000079523	ProperStrand	24	1	-14.8014
chr5	110270415	110270452	LINE	Lx6	L1	chr5Lx6110269486	NonProperStrand	3	chr16	23110939	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-inf
chr17	28035970	28036001	protein_coding	Uhrf1bp1	utr3	ENSMUSG00000039512	ProperStrand	79	chr9	15119722	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-3.8788
chr14	52821388	52822185	protein_coding	Chd8	exon	ENSMUSG00000053754	ProperStrand	167	chr7	116663637	116663759	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-1.9294
chr13	25029596	25029613	lincRNA	9330162012Rik	intron	ENSMUSG00000086448	ProperStrand	13	chr19	11857619	11859888	protein_coding	Stx3	exon	ENSMUSG00000041488	ProperStrand	37	1	-17.4055
chr7	20350021	20350110	protein_coding	Bcam	exon	ENSMUSG00000002980	ProperStrand	43	chr10	23505156	23505236	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-3.1809
chr8	108233711	108233729	protein_coding	4933405L10Rik	exon	ENSMUSG00000013158	ProperStrand	94	chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	1	-8.5458
chr17	66468411	66468427	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	chr5	8746512	8746653	protein_coding	Abcb1a	exon	ENSMUSG00000040584	ProperStrand	12	1	-13.1405
chr2	29774448	29774478	protein_coding-noncoding	Odf2	utr5	ENSMUSG00000026790	ProperStrand	2	chr15	88957646	88957829	protein_coding	Hdac10	exon	ENSMUSG00000062906	ProperStrand	9	1	-inf
chrX	7644560	7644580	protein_coding	Suv39h1	utr3	ENSMUSG00000039231	ProperStrand	24	chr13	90238585	90238643	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	1	-10.4977
chr4	43505712	43505792	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr5	151585628	151590890	protein_coding	Pds5b	exon	ENSMUSG00000034021	ProperStrand	21	1	-5.0559
chr16	21221833	21221938	protein_coding	Ephb3	exon	ENSMUSG00000005958	NonProperStrand	14	chr5	108334195	108334277	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-7.7199
chr9	55663335	55663373	protein_coding	Scaper	intron	ENSMUSG00000034007	ProperStrand	19	chr9	64023289	64023329	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	2	-16.9657
chr1	88252837	88252864	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	chr9	40612123	40612164	snoRNA	ENSMUSG00000075924_Snord14d	.	ENSMUSG00000075924	ProperStrand	131	2	-8.4014
chr11	117019895	117020018	protein_coding	Sec14l1	utr3	ENSMUSG00000020823	ProperStrand	71	chr7	109149271	109149287	protein_coding	Numa1	exon	ENSMUSG00000066306	NonProperStrand	171	1	-10.8732
chr11	62416574	62416599	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr1	74818557	74818576	protein_coding	Wnt6	utr5	ENSMUSG00000033227	NonProperStrand	11	1	-12.4341
chr4	126559848	126566767	protein_coding	Zmym4	exon	ENSMUSG00000042446	ProperStrand	94	chr6	113647493	113647559	protein_coding	Tatdn2	utr5	ENSMUSG00000056952	ProperStrand	24	1	-14.2628
chr19	8798439	8798792	lincRNA	Snhg1	exon	ENSMUSG00000090867	ProperStrand	100	chr19	8798490	8798557	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	3	-10.1989
chr6	125056658	125058350	protein_coding	Chd4	exon	ENSMUSG00000063870	ProperStrand	303	chr18	33954823	33954947	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-1.8540
chr1	163106710	163106800	SINE	B1_Mus1	Alu	chr1B1_Mus1163106723	ProperStrand	1	chr1	163106615	163106695	SINE	B2_Mm2	B2	chr1B2_Mm2163106575	ProperStrand	1	1	-inf
chrX	156005863	156005932	protein_coding	A830080D01Rik	exon	ENSMUSG00000044150	ProperStrand	102	chr4	131865908	131865976	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.0181
chr8	129489461	129489492	protein_coding	Rbm34	exon	ENSMUSG00000033931	ProperStrand	22	chr16	23111694	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	12	-20.6423
chr1	182002620	182092329	protein_coding	Cdc42bpa	exon	ENSMUSG00000026490	ProperStrand	24	chr16	23110830	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-5.9609
chr9	120481935	120482703	protein_coding	Rpl14	exon	ENSMUSG00000025794	ProperStrand	123	chr11	116714068	116714084	protein_coding	Srsf2	exon	ENSMUSG00000034120	ProperStrand	132	2	-16.1901
chr18	42483838	42485644	protein_coding	Rbm27	exon	ENSMUSG00000024491	ProperStrand	38	chr3	123210914	123210970	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.8448
chr14	112078399	112078416	protein_coding	Slitrk5	exon	ENSMUSG00000033214	NonProperStrand	4	chr5	130295414	130295489	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-10.8690
chr2	158185537	158185637	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr2	130103781	130103825	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-2.0058
chr14	49282272	49282288	protein_coding	Otx2	utr5	ENSMUSG00000021848	ProperStrand	19	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.7782
chr9	65011211	65011228	protein_coding	Igdcc3	intron	ENSMUSG00000032394	NonProperStrand	6	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-7.8657
chr9	108745485	108745501	protein_coding	Celsr3	exon	ENSMUSG00000023473	ProperStrand	31	chr5	121757381	121757449	protein_coding	Gm15800	exon	ENSMUSG00000042744	ProperStrand	47	2	-inf
chr16	32375989	32376011	protein_coding	Ubxn7	exon	ENSMUSG00000053774	ProperStrand	30	chr6	125136424	125136467	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	1	-7.8258
chr7	117189862	117189943	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr2	26768370	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	10	-7.7509
chr16	23111754	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	chr8	113362447	113362512	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	6	-1.3483
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr14	93575981	93575998	protein_coding	Pcdh9	intron	ENSMUSG00000055421	ProperStrand	59	1	-5.9366
chr14	51463983	51463999	protein_coding	Tep1	exon	ENSMUSG00000006281	NonProperStrand	73	chr11	71933601	71933617	protein_coding	Pitpnm3	exon	ENSMUSG00000040543	ProperStrand	3	1	-21.2676
chr8	109945400	109945500	protein_coding	Nob1	exon	ENSMUSG00000003848	ProperStrand	28	chr15	79908929	79908952	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	3	-15.8616
chr3	83746427	83746679	protein_coding	D930015E06Rik	exon	ENSMUSG00000033767	ProperStrand	17	chr16	23111748	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-7.0267
chr2	11679956	11679983	protein_coding	Fbxo18	exon	ENSMUSG00000058594	ProperStrand	6	chr4	122968584	122968674	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-11.0138
chr10	77912000	77913032	protein_coding	Pdxk	exon	ENSMUSG00000032788	ProperStrand	8	chr10	39978367	39978484	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-9.5507
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr8	74843912	74843999	protein_coding	Klf2	exon	ENSMUSG00000055148	ProperStrand	82	2	-11.5212
chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr11	74718954	74719010	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	1	-3.7019
chr2	26493423	26493523	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr2	93040831	93040869	protein_coding	Trp53i11	utr3	ENSMUSG00000068735	ProperStrand	46	1	-6.7210
chr7	151691989	151692098	protein_coding	Ppfia1	exon	ENSMUSG00000037519	ProperStrand	32	chr17	56753087	56753339	protein_coding	Rpl36	exon	ENSMUSG00000057863	ProperStrand	62	1	-14.5281
chr12	110925009	110925063	snoRNA	ENSMUSG00000064726_SNORD113	.	ENSMUSG00000064726	ProperStrand	42	chr13	23492662	23492698	tRNA	tRNA966-AlaAGC	.	194585	ProperStrand	20	5	-19.6394
chr15	76175570	76175615	protein_coding	Cyc1	exon	ENSMUSG00000022551	ProperStrand	47	chr17	35089183	35089236	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-5.9647
chr8	46855240	46855906	protein_coding	Sorbs2	exon	ENSMUSG00000031626	ProperStrand	50	chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	1	-11.8018
chr4	116883506	116883564	snRNA	ENSMUSG00000070237_U5	.	ENSMUSG00000070237	ProperStrand	154	chr18	35102297	35102337	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	3	-11.2472
chr4	43505657	43505716	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr5	134614687	134614703	protein_coding	Gatsl2	utr3	ENSMUSG00000015944	ProperStrand	8	1	-7.0216
chr13	11911162	11911182	protein_coding	Ryr2	intron	ENSMUSG00000021313	ProperStrand	61	chr10	110918559	110918697	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-3.4184
chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr1	90123798	90124639	protein_coding	Heatr7b1	utr5	ENSMUSG00000079429	ProperStrand	147	1	-4.7073
chr10	127962583	127962600	protein_coding	Esyt1	exon	ENSMUSG00000025366	NonProperStrand	32	chr11	69481334	69481416	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-7.3207
chr4	83937577	83937631	protein_coding	Bnc2	intron	ENSMUSG00000028487	ProperStrand	76	chr11	97642952	97642992	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-3.7417
chr11	14961829	14961849	LINE	Lx	L1	chr11Lx14961726	ProperStrand	93	chr5	23907915	23907931	protein_coding	Abcb8	exon	ENSMUSG00000028973	NonProperStrand	49	1	-12.8415
chr3	115952742	115952760	protein_coding	Gpr88	utr3	ENSMUSG00000068696	ProperStrand	8	chr9	15119679	15119708	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-6.5261
chr19	8963183	8963212	miRNA	Mir5136	.	ENSMUSG00000093314	ProperStrand	45	chr10	23505152	23505236	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.6487
chr12	86471942	86472004	protein_coding	Dlst	exon	ENSMUSG00000004789	ProperStrand	52	chr17	13112549	13112586	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	2	-8.0316
chr11	113156136	113156155	protein_coding	Slc39a11	intron	ENSMUSG00000041654	ProperStrand	25	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-8.9941
chr14	70299865	70299882	protein_coding	Pebp4	intron	ENSMUSG00000022085	ProperStrand	5	chr6	72388906	72388922	protein_coding	Mat2a	intron	ENSMUSG00000053907	ProperStrand	51	1	-18.8457
chr17	56861422	56861479	protein_coding	Ndufa11	exon	ENSMUSG00000002379	ProperStrand	17	chr3	88787051	88787067	protein_coding	Ash1l	exon	ENSMUSG00000028053	NonProperStrand	50	1	-16.2518
chr12	111932371	111932433	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr17	5243069	5264045	protein_coding	Arid1b	exon	ENSMUSG00000069729	ProperStrand	28	1	-9.7951
chr6	38293569	38304347	protein_coding	Zc3hav1	utr5	ENSMUSG00000029826	ProperStrand	20	chr10	23505162	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-7.8391
chr2	172805565	172805582	protein_coding	Spo11	intron	ENSMUSG00000005883	NonProperStrand	7	chr11	100122011	100122062	protein_coding	Krt17	exon	ENSMUSG00000035557	ProperStrand	1	1	-inf
chr16	23111390	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	chr12	110887828	110887883	snoRNA	ENSMUSG00000084549_SNORD113	.	ENSMUSG00000084549	ProperStrand	196	7	-3.7563
chr2	119207683	119208638	protein_coding	Ino80	exon	ENSMUSG00000034154	ProperStrand	54	chr10	75398681	75398994	protein_coding	Chchd10	utr5	ENSMUSG00000049422	ProperStrand	140	1	-11.8245
chr6	120884559	120884649	protein_coding	Mical3	utr3	ENSMUSG00000051586	ProperStrand	104	chr7	149170854	149171340	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	1	-10.1429
chr17	39979943	39980044	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr1	45488603	45488620	protein_coding	Col5a2	intron	ENSMUSG00000026042	ProperStrand	184	1	-5.0240
chr5	92715816	92738942	protein_coding	Sdad1	exon	ENSMUSG00000029415	ProperStrand	63	chr16	23110912	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-1.3499
chr8	87194607	87194661	protein_coding	Nacc1	utr3	ENSMUSG00000001910	ProperStrand	130	chr3	103766705	103766721	protein_coding	Rsbn1	utr3	ENSMUSG00000044098	NonProperStrand	17	1	-14.3199
chr8	109188275	109189295	protein_coding	Cdh1	exon	ENSMUSG00000000303	ProperStrand	283	chr17	26014729	26014745	protein_coding	0610011F06Rik	intron	ENSMUSG00000025731	ProperStrand	7	1	-14.6286
chr7	4960648	4960738	protein_coding	Fiz1	exon	ENSMUSG00000061374	ProperStrand	37	chr10	23505201	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.9550
chrX	56706131	56706150	protein_coding	Fgf13	intron	ENSMUSG00000031137	ProperStrand	39	chr3	123210881	123210971	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.7988
chr13	112540780	112541440	protein_coding	Map3k1	exon	ENSMUSG00000021754	ProperStrand	113	chr9	15118323	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-4.1651
chr12	17552972	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr13	90238641	90238721	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	1	-1.0894
chr1	75484537	75484553	protein_coding	Obsl1	exon	ENSMUSG00000026211	NonProperStrand	192	chr9	15119631	15119702	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-0.8870
chr13	73943044	73943535	protein_coding	Slc12a7	exon	ENSMUSG00000017756	ProperStrand	80	chr6	112581092	112581109	protein_coding	Rad18	intron	ENSMUSG00000030254	ProperStrand	38	1	-13.6585
chr7	19591412	19591429	protein_coding	Irf2bp1	exon	ENSMUSG00000044030	NonProperStrand	81	chr7	29136571	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.8745
chr1	78736637	78736653	LINE	Lx8	L1	chr1Lx878736589	ProperStrand	10	chr8	128998399	128998451	protein_coding	Gm17296	exon	ENSMUSG00000090290	ProperStrand	6	1	-19.4901
chr2	25312429	25313191	protein_coding	Clic3	exon	ENSMUSG00000015093	ProperStrand	79	chr1	63225275	63225293	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	1	-8.2854
chr5	120981124	120982925	protein_coding	Slc24a6	exon	ENSMUSG00000032754	ProperStrand	22	chr10	127563287	127563451	protein_coding	Baz2a	exon	ENSMUSG00000040054	ProperStrand	274	14	-inf
chr10	59413078	59413163	protein_coding	Ddit4	utr3	ENSMUSG00000020108	ProperStrand	49	chr2	130101991	130102081	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-5.7531
chr7	57947261	57947278	protein_coding	Nell1	intron	ENSMUSG00000055409	ProperStrand	8	chr10	23505243	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.7871
chr8	98393446	98397436	protein_coding	Got2	exon	ENSMUSG00000031672	ProperStrand	85	chr3	123210853	123210906	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-2.8546
chr9	30235085	30235102	protein_coding	Snx19	exon	ENSMUSG00000031993	ProperStrand	353	chr17	39985193	39985295	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	2	-4.5707
chr2	32905281	32905321	protein_coding	Garnl3	intron	ENSMUSG00000038860	ProperStrand	14	chr4	131908357	131908410	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-13.2972
chr9	120038309	120038379	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	chr2	146276262	146277477	protein_coding	Ralgapa2	exon	ENSMUSG00000037110	ProperStrand	35	1	-10.6105
chr4	141133694	141133739	protein_coding	Fblim1	utr3	ENSMUSG00000006219	ProperStrand	26	chr11	69483172	69483262	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-9.7687
chr1	132640340	132640357	protein_coding	AA986860	exon	ENSMUSG00000042510	NonProperStrand	8	chr11	62416575	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-9.2486
chr7	107434195	107434212	protein_coding	P4ha3	utr5	ENSMUSG00000051048	ProperStrand	7	chr11	77995189	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-10.5781
chr8	94881826	94881842	protein_coding	Irx5	utr5	ENSMUSG00000031737	NonProperStrand	9	chr12	17552961	17553030	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-8.9189
chr3	21703350	21703440	LINE	L1VL1	L1	chr3L1VL121703290	ProperStrand	1	chr3	21703615	21703695	LTR	RMER19C	ERVK	chr3RMER19C21703616	NonProperStrand	1	1	-inf
chr14	18095147	18095237	LINE	L1_Mus3	L1	chr14L1_Mus318094454	NonProperStrand	1	chr7	19192022	19192112	protein_coding	Psg23	utr3	ENSMUSG00000074359	NonProperStrand	2	1	-inf
chr13	76341035	76341055	protein_coding	Fam81b	intron	ENSMUSG00000078966	NonProperStrand	220	chr5	121655126	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-1.5373
chr7	150264252	150264268	protein_coding	Trpm5	exon	ENSMUSG00000009246	NonProperStrand	2	chr9	120039533	120039621	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-10.6072
chr19	25484358	25484374	protein_coding	Kank1	exon	ENSMUSG00000032702	ProperStrand	218	chr2	130103432	130103475	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-5.5153
chr15	76734812	76734969	protein_coding	Rpl8	exon	ENSMUSG00000003970	ProperStrand	191	chr11	97642958	97643048	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-0.7868
chr4	84872340	84872374	protein_coding	Sh3gl2	intron	ENSMUSG00000028488	ProperStrand	12	chr9	88443055	88443072	protein_coding	Zfp949	utr5	ENSMUSG00000032425	ProperStrand	4	1	-20.4237
chr11	6428054	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr8	113362431	113362489	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	6	-4.4433
chrX	102316313	102316329	protein_coding	Magee1	exon	ENSMUSG00000031227	NonProperStrand	2	chr18	35722049	35722088	protein_coding	Matr3	intron	ENSMUSG00000037236	ProperStrand	90	2	-inf
chr6	114260511	114260527	protein_coding	Slc6a1	exon	ENSMUSG00000030310	NonProperStrand	147	chr8	73029672	73029735	protein_coding	2810428I15Rik	exon	ENSMUSG00000058833	ProperStrand	7	1	-15.9614
chr3	75425374	75425391	protein_coding	Serpini1	intron	ENSMUSG00000027834	NonProperStrand	8	chr12	106269284	106269384	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-8.1771
chrX	49967185	49967202	antisense	A630012P03Rik	.	ENSMUSG00000055110	ProperStrand	10	chr2	75499731	75499787	protein_coding	Hnrnpa3	exon	ENSMUSG00000059005	ProperStrand	289	1	-13.8284
chr8	109441492	109442524	protein_coding	Cirh1a	exon	ENSMUSG00000041438	ProperStrand	40	chr16	23111416	23111496	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.8604
chr2	89368462	89368478	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	chr2	130103452	130103501	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-5.1592
chr2	90235322	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	13562823	13562840	protein_coding	Aig1	intron	ENSMUSG00000019806	ProperStrand	49	1	-4.8520
chr2	91031990	91032009	protein_coding	Nr1h3	exon	ENSMUSG00000002108	ProperStrand	8	chr11	68815259	68815276	protein_coding	Pfas	exon	ENSMUSG00000020899	ProperStrand	53	1	-17.5757
chr5	130719165	130719219	protein_coding	0610007L01Rik	utr3	ENSMUSG00000053094	ProperStrand	39	chr4	131908809	131908874	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.8599
chr12	72176769	72176899	protein_coding	Arid4a	exon	ENSMUSG00000048118	ProperStrand	9	chr16	23110986	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.9939
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr1	162967115	162967178	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	1	-4.3584
chr8	71631508	71631534	protein_coding	Atp6v1b2	exon	ENSMUSG00000006273	ProperStrand	29	chr5	130300460	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.8234
chr17	34990857	34990906	protein_coding	Rdbp	exon	ENSMUSG00000024369	ProperStrand	7	chr6	136709185	136709201	protein_coding	Gucy2c	exon	ENSMUSG00000042638	NonProperStrand	21	1	-19.4051
chr8	109194014	109194089	protein_coding	Cdh1	utr3	ENSMUSG00000000303	ProperStrand	283	chr12	112779175	112779265	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-1.9884
chr11	58809803	58810353	protein_coding	Obscn	exon	ENSMUSG00000061462	ProperStrand	81	chr4	131908393	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.0135
chr1	40053934	40053951	protein_coding	Map4k4	exon	ENSMUSG00000026074	ProperStrand	348	chr4	148800402	148800458	protein_coding	Ube4b	utr5	ENSMUSG00000028960	ProperStrand	66	1	-9.6000
chr9	120039480	120039984	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	chr15	79913288	79913345	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-1.4118
chr5	115322978	115322994	protein_coding	4930519G04Rik	intron	ENSMUSG00000029564	ProperStrand	22	chr1	88247798	88247835	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-7.0846
chr8	13417115	13417221	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr7	54441784	54441951	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	2	-7.9105
chr12	4326024	4326042	protein_coding	Ncoa1	intron	ENSMUSG00000020647	NonProperStrand	10	chr8	13416895	13416912	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-10.0944
chr3	87710335	87710435	protein_coding	Hdgf	utr5	ENSMUSG00000004897	ProperStrand	117	chr8	73419713	73419773	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-1.9880
chr11	116405035	116405195	protein_coding	Ube2o	exon	ENSMUSG00000020802	ProperStrand	134	chr15	34370545	34370639	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-2.1417
chr11	106937849	106937903	protein_coding	Bptf	exon	ENSMUSG00000040481	ProperStrand	70	chr17	35088957	35089005	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-5.5656
chr9	78023104	78023154	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr4	124595855	124595936	protein_coding	Cdca8	utr3	ENSMUSG00000028873	ProperStrand	41	3	-15.1218
chr9	81359763	81359781	LTR	MLT2B3	ERVL	chr9MLT2B381359481	ProperStrand	1	chr2	167433883	167433983	protein_coding	Gm20431	utr3	ENSMUSG00000089739	ProperStrand	81	1	-inf
chr5	124697639	124697708	protein_coding	Pitpnm2	intron	ENSMUSG00000029406	ProperStrand	12	chr2	166890837	166890858	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	3	-inf
chr1	72758321	72758719	protein_coding	Rpl37a	exon	ENSMUSG00000046330	ProperStrand	94	chr2	26493366	26493391	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-2.9258
chr18	25361887	25361904	protein_coding	AW554918	intron	ENSMUSG00000033632	ProperStrand	23	chr11	69483177	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.1990
chr7	85989063	85989079	protein_coding	Det1	exon	ENSMUSG00000030610	NonProperStrand	4	chr5	108334195	108334218	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-10.4241
chr11	32564164	32564199	protein_coding	Fbxw11	intron	ENSMUSG00000020271	ProperStrand	36	chr8	34802340	34802416	snoRNA	ENSMUSG00000088856_SNORA48	.	ENSMUSG00000088856	ProperStrand	236	3	-19.8878
chr11	42440243	42440259	protein_coding	Gabrb2	exon	ENSMUSG00000007653	ProperStrand	248	chr1	88252835	88252876	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-3.8975
chr9	78023108	78023170	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr5	104419087	104419187	protein_coding	Hsd17b11	utr3	ENSMUSG00000029311	ProperStrand	3	1	-12.2092
chr8	125005680	125005780	protein_coding	Fam38a	utr3	ENSMUSG00000014444	ProperStrand	132	chr15	76174896	76175035	protein_coding	Cyc1	exon	ENSMUSG00000022551	ProperStrand	47	1	-12.2237
chr15	94416715	94416736	protein_coding	Twf1	intron	ENSMUSG00000022451	ProperStrand	32	chrX	84483704	84483741	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-9.5139
chr1	162965560	162965600	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr4	130305549	130305622	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	1	-0.6971
chr8	86187819	86187835	protein_coding	Gipc1	exon	ENSMUSG00000019433	ProperStrand	60	chr17	39985726	39985754	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-5.9321
chr7	67123693	67123759	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	chr11	69483133	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	8	-5.1639
chr3	54586354	54586373	protein_coding	Smad9	exon	ENSMUSG00000027796	ProperStrand	24	chr16	23111694	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-8.8169
chr19	8948303	8948685	protein_coding	Ubxn1	exon	ENSMUSG00000071655	ProperStrand	68	chr19	8799829	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-4.7055
chr4	151707341	151707429	protein_coding	Rpl22	utr3	ENSMUSG00000028936	ProperStrand	112	chr4	131908693	131908783	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-1.1147
chr8	38049667	38049683	LTR	MLT1A0	MaLR	chr8MLT1A038049422	NonProperStrand	91	chr2	18045353	18045428	protein_coding	Mllt10	exon	ENSMUSG00000026743	ProperStrand	30	1	-13.8851
chr2	150735319	150735339	protein_coding	Gins1	utr5	ENSMUSG00000027454	ProperStrand	51	chr9	120039533	120039603	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.6175
chr7	133617934	133618034	protein_coding	Sh2b1	intron	ENSMUSG00000030733	ProperStrand	17	chr1	173433177	173433214	protein_coding	B930036N10Rik	utr3	ENSMUSG00000091993	ProperStrand	150	1	-14.0403
chr2	32881629	32881645	protein_coding	Garnl3	exon	ENSMUSG00000038860	NonProperStrand	54	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-11.8978
chr18	48207175	48207246	protein_coding	Gm5506	exon	ENSMUSG00000059040	ProperStrand	105	chr16	23110900	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	9	-4.4808
chr13	9833563	9833675	LINE	L1Md_T	L1	chr13L1Md_T9831266	NonProperStrand	15	chr8	13416896	13416912	protein_coding	Grk1	utr3	ENSMUSG00000031450	NonProperStrand	12	1	-19.6590
chr6	122663248	122663267	protein_coding	Nanog	exon	ENSMUSG00000012396	ProperStrand	66	chr6	97155529	97155548	protein_coding	Uba3	utr5	ENSMUSG00000030061	ProperStrand	37	1	-14.0955
chr14	33153227	33153832	protein_coding	Ogdhl	exon	ENSMUSG00000021913	ProperStrand	182	chrX	20002887	20002903	protein_coding	Phf16	utr5	ENSMUSG00000037315	ProperStrand	22	1	-13.1195
chr11	52066302	52066392	protein_coding	Tcf7	utr3	ENSMUSG00000000782	ProperStrand	24	chr8	73419706	73419786	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.8583
chr17	30947282	30947317	protein_coding	Dnahc8	exon	ENSMUSG00000033826	ProperStrand	246	chr2	22444817	22444862	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	3	-11.7524
chr6	86474821	86474886	protein_coding	Pcbp1	utr3	ENSMUSG00000051695	ProperStrand	108	chr9	120039628	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	4	-8.4142
chr2	179322380	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr4	131865856	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-1.8066
chr5	13585975	13585994	protein_coding	Sema3a	intron	ENSMUSG00000028883	ProperStrand	7	chr13	49779702	49779802	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-11.4219
chr6	125410694	125410730	protein_coding	Cd9	exon	ENSMUSG00000030342	ProperStrand	81	chr11	97642952	97643000	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	4	-7.5604
chr4	43505721	43505793	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr17	19519575	19530627	protein_coding	Vmn2r99	exon	ENSMUSG00000090304	ProperStrand	10	1	-6.5547
chr16	57391758	57391777	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr2	158184110	158184210	snoRNA	ENSMUSG00000064995_SNORA71	.	ENSMUSG00000064995	NonProperStrand	1	1	-inf
chrX	75009975	75010735	protein_coding	Prkx	exon	ENSMUSG00000035725	ProperStrand	2	chr1	88247781	88247871	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-12.5019
chr11	23184251	23184323	protein_coding	Xpo1	exon	ENSMUSG00000020290	ProperStrand	123	chr11	69481343	69481433	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-3.5652
chr2	90235292	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	164628331	164635524	protein_coding	Prrc2c	exon	ENSMUSG00000040225	ProperStrand	413	3	-3.6385
chr10	128062280	128062335	protein_coding	Rps26	exon	ENSMUSG00000025362	ProperStrand	67	chr14	63287573	63287613	snoRNA	ENSMUSG00000089531_SNORA73	.	ENSMUSG00000089531	ProperStrand	123	1	-11.6500
chr16	4650843	4650866	protein_coding	Coro7	intron	ENSMUSG00000039637	ProperStrand	25	chr2	26493366	26493488	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-8.9295
chr16	17469143	17469200	protein_coding	Crkl	exon	ENSMUSG00000006134	ProperStrand	43	chr13	117089727	117089744	protein_coding	Isl1	exon	ENSMUSG00000042258	NonProperStrand	17	1	-16.6081
chr1	127491935	127491952	protein_coding	Slc35f5	utr3	ENSMUSG00000026342	ProperStrand	70	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-2.6930
chr17	35070242	35070300	protein_coding-noncoding	Neu1	utr5	ENSMUSG00000007038	ProperStrand	1	chr5	108336367	108336467	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-inf
chr10	109640049	109640066	SINE	RSINE1	B4	chr10RSINE1109639979	ProperStrand	51	chr17	35089182	35089236	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-5.8038
chr13	55561283	55561383	protein_coding	Grk6	utr3	ENSMUSG00000074886	ProperStrand	13	chr4	131865948	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.5141
chr13	63133876	63133895	protein_coding	2010111I01Rik	intron	ENSMUSG00000021458	ProperStrand	32	chr19	8963134	8963165	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.3834
chr19	38049082	38049402	protein_coding	Myof	exon	ENSMUSG00000048612	ProperStrand	37	chr14	33005111	33005191	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-4.9188
chr16	10744867	10744905	protein_coding	Clec16a	utr3	ENSMUSG00000068663	ProperStrand	24	chr7	30808308	30808324	protein_coding	Zfp568	exon	ENSMUSG00000074221	ProperStrand	110	1	-13.9559
chr8	24347997	24348082	protein_coding	Gins4	utr5	ENSMUSG00000031546	ProperStrand	10	chr16	23110833	23110873	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.7978
chr12	33638594	33638614	lincRNA	4933406C10Rik	exon	ENSMUSG00000086543	ProperStrand	52	chr14	33153227	33153832	protein_coding	Ogdhl	exon	ENSMUSG00000021913	ProperStrand	182	1	-11.3753
chr10	122381255	122381271	protein_coding	Ppm1h	utr3	ENSMUSG00000034613	NonProperStrand	21	chr11	51508602	51508622	protein_coding	Sec24a	utr3	ENSMUSG00000036391	ProperStrand	42	1	-16.1284
chr13	95336013	95336103	protein_coding	Ap3b1	utr3	ENSMUSG00000021686	ProperStrand	96	chr11	97642977	97643057	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.7088
chr12	114290175	114290191	protein_coding	Pacs2	intron	ENSMUSG00000021143	NonProperStrand	302	chr11	62416601	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-2.2124
chr4	131399490	131399506	protein_coding	Mecr	exon	ENSMUSG00000028910	NonProperStrand	109	chr10	90581034	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-3.6778
chr2	92200905	92200965	protein_coding	Phf21a	utr3	ENSMUSG00000058318	ProperStrand	25	chr18	35714145	35714235	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-5.1110
chr2	26296671	26296723	protein_coding	Sec16a	exon	ENSMUSG00000026924	ProperStrand	86	chr5	108336363	108336428	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	3	-10.1267
chr12	27874148	27874164	LTR	ORR1E	MaLR	chr12ORR1E27874117	NonProperStrand	27	chr16	23110960	23111002	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.1875
chr15	102043247	102043263	protein_coding	Zfp740	utr3	ENSMUSG00000046897	ProperStrand	34	chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	1	-12.8314
chr1	129433173	129433253	protein_coding	Tmem163	intron	ENSMUSG00000026347	ProperStrand	7	chr1	130195029	130195119	protein_coding	Lct	exon	ENSMUSG00000026354	NonProperStrand	9	1	-19.9681
chr17	71864996	71865060	protein_coding	Ndc80	intron	ENSMUSG00000024056	ProperStrand	33	chr3	88715214	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-8.4322
chr1	153227355	153227445	protein_coding	1200016B10Rik	intron	ENSMUSG00000052748	ProperStrand	16	chr19	8963101	8963181	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-7.8761
chr16	23111756	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	chr11	69482357	69482387	snoRNA	ENSMUSG00000089542_snoU6-77	.	ENSMUSG00000089542	ProperStrand	138	1	-0.7630
chr8	111326805	111326829	protein_coding	Zfhx3	intron	ENSMUSG00000038872	NonProperStrand	12	chr7	29136575	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-8.9416
chr4	43428877	43428967	protein_coding	Rusc2	exon	ENSMUSG00000035969	ProperStrand	22	chrX	103398736	103398797	protein_coding	Pgk1	utr3	ENSMUSG00000062070	ProperStrand	484	2	-17.5422
chr15	98374787	98374834	protein_coding	Ccnt1	exon	ENSMUSG00000011960	ProperStrand	14	chr18	35714181	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	6	-inf
chrX	161420845	161420891	protein_coding	Fancb	exon	ENSMUSG00000047757	ProperStrand	2	chr1	162967511	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-10.7784
chr13	9833552	9833651	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr1	36231050	36231751	protein_coding	Uggt1	exon	ENSMUSG00000037470	ProperStrand	67	1	-4.7415
chr10	127521199	127521271	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	chr4	122970392	122970493	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	2	-5.2966
chr10	17547610	17547626	protein_coding	Txlnb	exon	ENSMUSG00000039891	ProperStrand	70	chr9	81949795	81949813	protein_coding	Mei4	intron	ENSMUSG00000043289	NonProperStrand	42	1	-13.7236
chr6	135185295	135185312	protein_coding	8430419L09Rik	utr3	ENSMUSG00000030207	NonProperStrand	5	chr4	131908819	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.7672
chr9	42850722	42913321	protein_coding	Arhgef12	utr5	ENSMUSG00000059495	ProperStrand	16	chr5	130300531	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.9748
chr2	26493391	26493517	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	mmu-miR-6238	1	21	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	2	-6.0032
chr1	182258159	182258249	protein_coding	Gm5069	exon	ENSMUSG00000055676	NonProperStrand	1	chr9	51430752	51430842	protein_coding	Gm7293	utr5	ENSMUSG00000078308	NonProperStrand	1	1	-inf
chr7	35015638	35015700	antisense	Gm12762	.	ENSMUSG00000086526	ProperStrand	2	chr3	137849424	137849440	protein_coding	4930579F01Rik	utr5	ENSMUSG00000012042	NonProperStrand	156	1	-19.7224
chr6	95605490	95605568	protein_coding	Suclg2	exon	ENSMUSG00000061838	ProperStrand	35	chr11	62417001	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-7.1137
chr9	72597283	72597325	protein_coding	Nedd4	utr3	ENSMUSG00000032216	ProperStrand	308	chr5	108334196	108334286	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-1.8907
chrX	72214248	72214264	protein_coding-noncoding	Gab3	utr3	ENSMUSG00000032750	ProperStrand	420	chr1	93263065	93263081	protein_coding	Fam132b	exon	ENSMUSG00000047443	NonProperStrand	98	1	-8.4340
chrX	90827379	90827395	protein_coding	Pola1	exon	ENSMUSG00000006678	ProperStrand	83	chr7	16524110	16524179	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	1	-9.0674
chr1	93397613	93397708	protein_coding	Traf3ip1	exon	ENSMUSG00000034292	ProperStrand	4	chr10	23505152	23505209	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-6.2798
chr13	28653437	28843562	lincRNA	2610307P16Rik	exon	ENSMUSG00000085936	ProperStrand	154	chr9	50816824	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	2	-15.6525
chr11	100486401	100486483	protein_coding	Nkiras2	exon	ENSMUSG00000017837	ProperStrand	4	chr8	129468746	129468836	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-9.9983
chr8	34693168	34693184	protein_coding	Tex15	exon	ENSMUSG00000009628	NonProperStrand	31	chr17	35089180	35089232	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-6.7915
chr5	139626390	139626448	protein_coding	Heatr2	exon	ENSMUSG00000025857	ProperStrand	7	chr13	46862888	46862988	snoRNA	ENSMUSG00000064558_SNORA55	.	ENSMUSG00000064558	ProperStrand	187	1	-15.4702
chr7	51789995	51790428	protein_coding	Pold1	exon	ENSMUSG00000038644	NonProperStrand	10	chr6	53768225	53768242	protein_coding	Tril	exon	ENSMUSG00000043496	ProperStrand	3	3	-inf
chrX	12671274	12733750	protein_coding	Usp9x	exon	ENSMUSG00000031010	ProperStrand	174	chr7	116663649	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-3.0064
chr8	73407657	73407674	protein_coding	Slc5a5	utr3	ENSMUSG00000000792	ProperStrand	6	chr7	104054544	104054560	protein_coding	Odz4	exon	ENSMUSG00000048078	ProperStrand	93	1	-17.0255
chr16	37884005	37884066	protein_coding	Lrrc58	utr3	ENSMUSG00000034158	ProperStrand	23	chr15	34370565	34370655	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-5.3878
chr2	51945150	51945188	protein_coding	Rif1	exon	ENSMUSG00000036202	ProperStrand	201	chr1	162967492	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-1.4526
chrX	106290968	106345261	protein_coding	Sh3bgrl	exon	ENSMUSG00000031246	ProperStrand	9	chr1	134409289	134409338	protein_coding	Cntn2	utr3	ENSMUSG00000053024	ProperStrand	1	1	-inf
chrX	11635848	11635865	protein_coding	Bcor	exon	ENSMUSG00000040363	NonProperStrand	293	chr2	26494782	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-0.7169
chr3	34563623	34563639	non_coding	Sox2ot	.	ENSMUSG00000090828	NonProperStrand	13	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.5141
chr19	5898254	5898286	protein_coding	Dpf2	utr3	ENSMUSG00000024826	ProperStrand	38	chr2	154698567	154698634	protein_coding	Eif2s2	exon	ENSMUSG00000074656	ProperStrand	96	3	-22.0426
chr12	10097513	10097603	LTR	MTA_Mm	MaLR	chr12MTA_Mm10097526	ProperStrand	1	chr12	100935906	100935996	LTR	MTC	MaLR	chr12MTC100935754	ProperStrand	1	1	-inf
chr5	108332828	108336689	protein_coding	Rpl5	exon	ENSMUSG00000058558	ProperStrand	235	chr5	108336403	108336493	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-4.2119
chr14	99494460	99494537	protein_coding	Dis3	exon	ENSMUSG00000033166	ProperStrand	17	chr16	23110941	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-7.6481
chr10	86156690	86161120	protein_coding	Hsp90b1	exon	ENSMUSG00000020048	ProperStrand	396	chr7	29136576	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	4	-1.3687
chr16	91658610	91659380	protein_coding	Son	exon	ENSMUSG00000022961	ProperStrand	59	chr16	23110942	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-0.8243
chr3	26220145	26220162	LINE	Lx4B	L1	chr3Lx4B26219849	NonProperStrand	13	chr2	130101988	130102085	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	2	-13.5099
chr1	127289658	127289758	protein_coding	Actr3	utr3	ENSMUSG00000026341	ProperStrand	45	chr17	35087894	35087946	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-5.7630
chr7	151703562	151705054	protein_coding	Ppfia1	exon	ENSMUSG00000037519	ProperStrand	32	chr3	123210902	123210982	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	4	-10.9101
chr14	55263294	55263384	protein_coding	Acin1	exon	ENSMUSG00000022185	ProperStrand	67	chr10	110918611	110918691	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-3.2474
chrX	20248576	20248866	protein_coding	Uba1	exon	ENSMUSG00000001924	ProperStrand	156	chr5	32384963	32384983	protein_coding	Bre	intron	ENSMUSG00000052139	ProperStrand	33	2	-18.6619
chrX	13892529	13892619	snRNA	ENSMUSG00000064772_U2	.	ENSMUSG00000064772	ProperStrand	4	chr17	24856620	24856700	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-12.0775
chr2	24487464	24487503	protein_coding	Cacna1b	exon	ENSMUSG00000004113	ProperStrand	83	chr11	69483136	69483185	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-3.4823
chr17	29177676	29177703	protein_coding-noncoding	Srsf3	utr5	ENSMUSG00000071172	ProperStrand	30	chr16	23110828	23110872	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0481
chr9	21392724	21392780	protein_coding	Carm1	utr3	ENSMUSG00000032185	ProperStrand	82	chr19	8963027	8963111	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.7714
chr13	53447040	53447057	protein_coding	Sptlc1	exon	ENSMUSG00000021468	NonProperStrand	4	chr16	23110856	23110918	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.6489
chr13	107765484	107765502	protein_coding	Kif2a	exon	ENSMUSG00000021693	ProperStrand	32	chr7	52381758	52381805	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	2	-14.0487
chr19	10703935	10704025	protein_coding	Ddb1	utr3	ENSMUSG00000024740	ProperStrand	304	chr7	116663683	116663763	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-0.8484
chr18	10792934	10793022	protein_coding	Mib1	exon	ENSMUSG00000024294	ProperStrand	27	chr18	33954816	33954906	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-5.0261
chr14	33150736	33150969	protein_coding	Ogdhl	exon	ENSMUSG00000021913	ProperStrand	182	chr5	74489640	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	4	-7.1614
chr7	149170855	149171340	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	chr7	150717298	150717378	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-3.5474
chr9	40611382	40611431	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr18	82662186	82662202	protein_coding	Mbp	intron	ENSMUSG00000041607	NonProperStrand	185	1	-5.9095
chr1	38094431	38102240	protein_coding	Eif5b	exon	ENSMUSG00000026083	ProperStrand	118	chr2	26494712	26494837	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	4	-7.4742
chr3	94682869	94682951	protein_coding	Pogz	exon	ENSMUSG00000038902	ProperStrand	65	chr7	116663637	116663727	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.3755
chrX	53912507	53912607	protein_coding	Slc9a6	intron	ENSMUSG00000060681	ProperStrand	1	chr13	23622985	23623044	protein_coding	Hist1h4h	exon	ENSMUSG00000060981	ProperStrand	30	1	-inf
chr7	26127701	26127761	protein_coding	Megf8	exon	ENSMUSG00000045039	ProperStrand	100	chr11	69483136	69483235	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	5	-8.6122
chr3	37233975	37234065	protein_coding	Fgf2	intron	ENSMUSG00000037225	ProperStrand	2	chr9	15118246	15118326	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-10.7700
chr11	44278938	44279105	protein_coding	Ublcp1	exon	ENSMUSG00000041231	ProperStrand	13	chr18	33954840	33954930	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-6.4885
chr2	90235297	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	90848703	90848719	protein_coding	Adcy7	exon	ENSMUSG00000031659	ProperStrand	19	1	-6.7268
chr1	39425078	39426914	protein_coding	Rpl31	exon	ENSMUSG00000073702	ProperStrand	41	chr18	35716758	35716848	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.8214
chr19	6233795	6233895	protein_coding	Ppp2r5b	exon	ENSMUSG00000024777	ProperStrand	4	chr16	23111776	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-7.1763
chr5	31505060	31505135	protein_coding	Ppm1g	utr3	ENSMUSG00000029147	ProperStrand	69	chr2	26494708	26494765	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-4.9664
chr8	113447145	113447170	protein_coding	St3gal2	intron	ENSMUSG00000031749	ProperStrand	206	chr11	68886980	68887056	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-1.9638
chr5	74489227	74489593	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr4	131866155	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	12	-0.9150
chr9	120038466	120038539	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	NonProperStrand	28	chr3	123210854	123210892	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	NonProperStrand	45	1	-15.4247
chr7	29171540	29171558	protein_coding	Med29	utr3	ENSMUSG00000003444	NonProperStrand	134	chr14	52829460	52829518	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-6.6053
chr4	117908554	117908634	protein_coding	Ptprf	exon	ENSMUSG00000033295	ProperStrand	337	chr8	126792818	126792908	protein_coding	Galnt2	intron	ENSMUSG00000089704	ProperStrand	5	1	-15.0220
chr4	140881202	140881295	protein_coding	Epha2	intron	ENSMUSG00000006445	ProperStrand	148	chr3	89772062	89772080	snRNA	ENSMUSG00000065045_U1	.	ENSMUSG00000065045	NonProperStrand	6	4	-18.8634
chr9	66366104	66366194	protein_coding	Usp3	utr3	ENSMUSG00000032376	ProperStrand	18	chr8	32260340	32260420	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	7	-19.4193
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	181231987	181232029	protein_coding	Tpd52l2	utr5	ENSMUSG00000000827	ProperStrand	20	1	-6.6233
chr4	116780762	116780801	protein_coding	Ptch2	exon	ENSMUSG00000028681	ProperStrand	14	chr16	23110472	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.1866
chr6	148303269	148303359	protein_coding	Rps4y2	exon	ENSMUSG00000063171	ProperStrand	47	chr9	15119677	15119757	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.0610
chr6	67251646	67251746	protein_coding	Il12rb2	intron	ENSMUSG00000018341	NonProperStrand	11	chr16	23111381	23111425	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.1830
chr9	44216094	44216136	protein_coding	Rps25	exon	ENSMUSG00000009927	ProperStrand	42	chr15	79913288	79913352	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.2623
chr4	85016349	85016365	protein_coding	Sh3gl2	intron	ENSMUSG00000028488	NonProperStrand	313	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-8.3799
chr7	37547991	37548008	protein_coding	Tshz3	intron	ENSMUSG00000021217	NonProperStrand	11	chr17	35089181	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-8.9052
chr7	20004600	20004617	protein_coding	A930016O22Rik	utr3	ENSMUSG00000040705	ProperStrand	7	chr2	32818803	32818893	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-9.8490
chr4	94245109	94249189	protein_coding	Plaa	exon	ENSMUSG00000028577	ProperStrand	40	chr4	131865878	131865978	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.4299
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr2	74582202	74582218	protein_coding	Hoxd3	exon	ENSMUSG00000079277	NonProperStrand	14	1	-8.8326
chr13	19684241	19684257	protein_coding	Epdr1	utr3	ENSMUSG00000002808	ProperStrand	46	chr16	23111384	23111474	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.6437
chr7	125866022	125866088	protein_coding	6330503K22Rik	exon	ENSMUSG00000033904	ProperStrand	25	chr11	77995189	77995214	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-7.9320
chr7	86050831	86050883	protein_coding	Aen	exon	ENSMUSG00000030609	ProperStrand	17	chr7	4763881	4763921	protein_coding	Ube2s	utr5	ENSMUSG00000060860	ProperStrand	62	3	-inf
chr1	145586547	145586564	protein_coding	Glrx2	utr5	ENSMUSG00000018196	NonProperStrand	5	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-11.7344
chr2	165958308	165958325	protein_coding	Sulf2	utr5	ENSMUSG00000006800	NonProperStrand	3	chrX	61529981	61530005	protein_coding	Slitrk4	utr5	ENSMUSG00000046699	NonProperStrand	1	1	-inf
chr10	6450631	6450649	protein_coding	Plekhg1	intron	ENSMUSG00000040624	NonProperStrand	75	chr9	15119967	15119989	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-6.8098
chr4	153534526	153534542	protein_coding	Tprgl	exon	ENSMUSG00000029030	ProperStrand	50	chr9	15119695	15119726	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-5.1174
chr1	182499099	182507746	protein_coding	Parp1	utr5	ENSMUSG00000026496	ProperStrand	227	chr11	69483136	69483253	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-1.2628
chr1	88253208	88253298	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chr5	122820524	122821913	protein_coding	1500011H22Rik	exon	ENSMUSG00000029463	ProperStrand	24	1	-9.2009
chr17	45704952	45704995	protein_coding	Hsp90ab1	utr3	ENSMUSG00000023944	ProperStrand	1627	chr13	109461467	109461577	protein_coding	Gm9000	exon	ENSMUSG00000059751	ProperStrand	25	1	-8.4855
chr2	25312429	25313191	protein_coding	Clic3	exon	ENSMUSG00000015093	ProperStrand	79	chr11	98878390	98878419	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-5.7436
chr2	26493364	26493465	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr9	64143797	64143875	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	11	-7.4943
chr5	140857296	140857313	protein_coding	Snx8	intron	ENSMUSG00000029560	ProperStrand	106	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-6.6093
chr4	151631314	151631370	protein_coding	Acot7	intron	ENSMUSG00000028937	ProperStrand	15	chr9	120039630	120039686	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-5.9962
chr12	17286475	17290866	protein_coding	Pdia6	utr3	ENSMUSG00000020571	ProperStrand	114	chr4	131865865	131865965	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.7782
chr1	90160545	90160610	protein_coding	Hjurp	utr3	ENSMUSG00000044783	ProperStrand	110	chr12	59368501	59368591	protein_coding	Clec14a	exon	ENSMUSG00000045930	ProperStrand	6	2	-21.7567
chr10	127962583	127962600	protein_coding	Esyt1	exon	ENSMUSG00000025366	NonProperStrand	32	chr18	35714178	35714278	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	3	-11.1017
chr11	87863624	87864930	protein_coding	Srsf1	utr3	ENSMUSG00000018379	ProperStrand	49	chr4	56910525	56910628	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	6	-inf
chr8	86463259	86463307	protein_coding	Lphn1	utr3	ENSMUSG00000013033	ProperStrand	221	chr6	71832604	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-3.1471
chr4	148240343	148240363	protein_coding	Casz1	intron	ENSMUSG00000028977	ProperStrand	27	chr2	32818182	32818537	protein_coding	Rpl12	exon	ENSMUSG00000038900	ProperStrand	167	1	-12.8751
chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	chr18	33954841	33954951	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-1.3873
chr6	87138823	87154416	protein_coding	Antxr1	exon	ENSMUSG00000033420	ProperStrand	70	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-11.3754
chr3	157583972	157587901	protein_coding	Cth	exon	ENSMUSG00000028179	ProperStrand	14	chr11	68886955	68887033	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-7.0150
chr13	67514078	67514781	protein_coding	Zfp459	exon	ENSMUSG00000055560	ProperStrand	5	chr2	145077954	145209256	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-12.8805
chr8	67228561	67230543	protein_coding	Klhl2	exon	ENSMUSG00000031605	ProperStrand	14	chr11	84634790	84634907	protein_coding	Dhrs11	exon	ENSMUSG00000034449	ProperStrand	12	1	-22.4876
chr11	32128978	32129030	protein_coding	Mpg	intron	ENSMUSG00000020287	ProperStrand	5	chr5	130300525	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-7.4021
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr2	130103440	130103500	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-1.2568
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr19	8798504	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-1.3645
chr4	43505757	43505847	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chrX	99811324	99811378	protein_coding	Phka1	exon	ENSMUSG00000034055	ProperStrand	7	1	-7.3054
chr6	119898976	119899029	protein_coding	Wnk1	exon	ENSMUSG00000045962	ProperStrand	221	chr6	124691243	124691304	protein_coding	Grcc10	utr5	ENSMUSG00000072772	ProperStrand	88	1	-9.9294
chr4	131399490	131399506	protein_coding	Mecr	exon	ENSMUSG00000028910	NonProperStrand	109	chr8	32260335	32260433	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-3.5074
chr10	80543312	80543346	protein_coding	Thop1	exon	ENSMUSG00000004929	ProperStrand	20	chr9	120038613	120038675	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.1184
chr4	129165230	129165265	protein_coding	Bsdc1	utr3	ENSMUSG00000040859	ProperStrand	14	chr16	23110913	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-14.4611
chr7	95266597	95266613	protein_coding	Grm5	intron	ENSMUSG00000049583	NonProperStrand	145	chr11	6428060	6428089	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.7064
chr15	100358955	100358972	protein_coding	Tfcp2	exon	ENSMUSG00000009733	NonProperStrand	77	chr4	131908838	131908896	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.9043
chr11	87240282	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	chr18	33954821	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-2.8892
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr3	89568172	89568188	protein_coding	Chrnb2	intron	ENSMUSG00000027950	ProperStrand	8	1	-8.5166
chr19	53082307	53082324	protein_coding	Xpnpep1	intron	ENSMUSG00000025027	NonProperStrand	58	chr4	149019546	149020402	protein_coding	Clstn1	exon	ENSMUSG00000039953	ProperStrand	173	1	-11.2571
chr2	102147364	102147403	protein_coding	Trim44	intron	ENSMUSG00000027189	ProperStrand	26	chr9	15119632	15119711	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-7.0067
chr11	97008709	97008806	protein_coding	Tbkbp1	exon	ENSMUSG00000038517	ProperStrand	10	chr8	75177456	75180961	protein_coding	Nwd1	exon	ENSMUSG00000048148	ProperStrand	46	1	-17.6155
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr12	79910910	79910927	protein_coding	Mpp5	exon	ENSMUSG00000021112	NonProperStrand	26	1	-6.0972
chr16	91034987	91035071	protein_coding-noncoding	Gcfc1	utr3	ENSMUSG00000022974	ProperStrand	1	chr15	99329179	99329195	protein_coding	Faim2	utr3	ENSMUSG00000023011	ProperStrand	45	1	-inf
chr4	131865854	131865988	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr18	35714144	35714294	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	136	-4.4014
chr7	4745123	4745213	protein_coding	Rpl28	exon	ENSMUSG00000030432	ProperStrand	220	chr9	110158655	110164574	protein_coding	Cspg5	exon	ENSMUSG00000032482	ProperStrand	6	1	-15.4688
chr11	3156697	3162503	protein_coding	Drg1	exon	ENSMUSG00000020457	ProperStrand	19	chr11	62416992	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-8.3479
chr9	63868722	63868739	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	chr11	55296223	55296323	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	5	-9.3087
chr17	35800446	35801056	protein_coding	Vars2	exon	ENSMUSG00000038838	ProperStrand	19	chr4	131908261	131908341	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.3472
chr2	129513510	129513526	protein_coding	Pdyn	utr3	ENSMUSG00000027400	NonProperStrand	3	chr1	89673731	89673786	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-9.4507
chr15	76467745	76467782	protein_coding	Tonsl	intron	ENSMUSG00000059323	ProperStrand	8	chr9	15119661	15119761	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-6.5261
chr5	30925527	30925543	protein_coding	Kcnk3	utr3	ENSMUSG00000049265	NonProperStrand	21	chr2	158182201	158182278	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-7.0817
chr10	62802344	62802360	protein_coding	Sirt1	intron	ENSMUSG00000020063	NonProperStrand	116	chr2	22445648	22445705	pseudogene	Gm13339	.	ENSMUSG00000082884	ProperStrand	24	1	-13.8470
chr17	24562616	24562698	protein_coding	Rnps1	utr3	ENSMUSG00000034681	ProperStrand	40	chr10	80644020	80644084	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-6.9031
chr9	37443785	37443865	protein_coding	Siae	intron	ENSMUSG00000001942	ProperStrand	5	chr9	48150812	48150902	protein_coding	Fam55b	intron	ENSMUSG00000032028	ProperStrand	25	1	-18.7681
chr19	8799027	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	chr7	52382237	52382314	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-1.3598
chr10	79781933	79781949	protein_coding	2310011J03Rik	utr3	ENSMUSG00000020133	NonProperStrand	5	chr11	119149742	119149793	protein_coding	Eif4a3	utr3	ENSMUSG00000025580	ProperStrand	14	1	-inf
chr12	112050080	112051792	protein_coding	Stk30	exon	ENSMUSG00000056458	ProperStrand	2	chr16	23110909	23110999	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr5	130712748	130712777	protein_coding	0610007L01Rik	exon	ENSMUSG00000053094	ProperStrand	39	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-6.0570
chr5	73151604	73151620	protein_coding	Tec	exon	ENSMUSG00000029217	ProperStrand	3	chr4	131865860	131865950	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.6896
chr1	53253836	53253856	protein_coding	Pms1	exon	ENSMUSG00000026098	ProperStrand	16	chr11	69481335	69481463	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	3	-13.4991
chr7	19800699	19800717	protein_coding	Gpr4	intron	ENSMUSG00000044317	ProperStrand	4	chr7	16524110	16524180	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	1	-15.3974
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr14	119693352	119693368	protein_coding	Hs6st3	intron	ENSMUSG00000053465	NonProperStrand	134	2	-5.1400
chr10	79977865	79977881	protein_coding	Onecut3	utr3	ENSMUSG00000045518	ProperStrand	8	chr13	51743567	51743664	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-10.9793
chr5	35206976	35207011	protein_coding	Htt	exon	ENSMUSG00000029104	ProperStrand	73	chr5	121655052	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	3	-8.4676
chr10	83991103	83991137	protein_coding	Ckap4	exon	ENSMUSG00000046841	ProperStrand	60	chr11	69483136	69483211	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-6.5039
chr7	15863018	15863039	LTR	MuRRS-int	ERV1	chr7MuRRS-int15862787	NonProperStrand	1	chr2	130101262	130101310	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-inf
chr2	127589629	127591837	protein_coding	Nphp1	exon	ENSMUSG00000027378	ProperStrand	7	chr1	89673721	89673774	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-7.5185
chr12	37040848	37040865	protein_coding	Sostdc1	utr5	ENSMUSG00000036169	NonProperStrand	13	chr14	33005038	33005128	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	2	-11.3798
chr12	71146391	71146407	protein_coding	Nin	exon	ENSMUSG00000021068	ProperStrand	95	chr1	162965980	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-2.7747
chr8	8639487	8660497	protein_coding	Efnb2	exon	ENSMUSG00000001300	NonProperStrand	14	chr1	175297744	175297760	protein_coding	Aim2	intron	ENSMUSG00000037860	ProperStrand	16	1	-19.1867
chr10	79316213	79316230	lincRNA	E130317F20Rik	exon	ENSMUSG00000091994	NonProperStrand	97	chr3	68889051	68889151	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-2.4126
chr14	39182648	39182665	protein_coding-noncoding	Nrg3	utr3	ENSMUSG00000041014	NonProperStrand	30	chr3	89800728	89800783	protein_coding	Hax1	intron	ENSMUSG00000027944	ProperStrand	7	1	-20.2855
chr5	90679410	90679449	protein_coding	Ankrd17	exon	ENSMUSG00000055204	ProperStrand	77	chr16	23111721	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	6	-10.4309
chr11	68886988	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	NonProperStrand	12	chr5	108334231	108334331	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	NonProperStrand	17	1	-18.8896
chr14	47875888	47878238	protein_coding	Wdhd1	exon	ENSMUSG00000037572	ProperStrand	35	chr5	130295470	130295550	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	8	-inf
chr17	24857392	24857563	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr4	131865418	131865498	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-1.0042
chrX	11635848	11635865	protein_coding	Bcor	exon	ENSMUSG00000040363	NonProperStrand	293	chr1	162965980	162966003	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-1.0371
chr11	11729148	11735781	protein_coding	Ddc	exon	ENSMUSG00000020182	ProperStrand	19	chr7	117189866	117189909	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-8.5167
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr9	98477444	98477493	protein_coding	Copb2	exon	ENSMUSG00000032458	ProperStrand	33	1	-9.7967
chr17	34987873	34987901	protein_coding	Rdbp	exon	ENSMUSG00000024369	ProperStrand	7	chr5	121655036	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-8.0440
chr16	98284319	98284361	LINE	L1_Mus1	L1	chr16L1_Mus198283327	ProperStrand	23	chr4	131908688	131908795	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.7500
chr9	81949792	81949813	protein_coding	Mei4	intron	ENSMUSG00000043289	NonProperStrand	42	chr7	150717298	150717424	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-6.2088
chr2	3442831	3442847	protein_coding	Cdnf	utr3	ENSMUSG00000039496	ProperStrand	8	chr19	8798484	8798550	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-9.2953
chr11	120456088	120456168	protein_coding	Alyref	utr3	ENSMUSG00000025134	ProperStrand	53	chr17	24856620	24856710	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-6.6730
chr5	65693127	65693183	protein_coding	Rfc1	intron	ENSMUSG00000029191	ProperStrand	53	chr16	23111426	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.4339
chr16	16983719	16983791	protein_coding	Mapk1	exon	ENSMUSG00000063358	ProperStrand	67	chr7	116663720	116663768	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-4.1340
chr1	34252823	34252843	protein_coding	Dst	utr5	ENSMUSG00000026131	ProperStrand	461	chr4	96412508	96412526	protein_coding	Gm12695	intron	ENSMUSG00000078639	ProperStrand	110	1	-8.0185
chr12	110892834	110892906	snoRNA	ENSMUSG00000064621_AF357355	.	ENSMUSG00000064621	ProperStrand	60	chr10	23505149	23505234	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-2.3798
chr9	61761265	61761288	protein_coding	Rplp1	exon	ENSMUSG00000007892	ProperStrand	116	chr15	34370545	34370579	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-2.3811
chr7	16527649	16528140	protein_coding	Gltscr2	exon	ENSMUSG00000041560	ProperStrand	127	chr12	44844024	44844058	snoRNA	ENSMUSG00000065004_SNORA33	.	ENSMUSG00000065004	ProperStrand	111	1	-10.5722
chr10	52021606	52021686	protein_coding	Dcbld1	intron	ENSMUSG00000019891	ProperStrand	21	chr12	87753832	87753922	protein_coding	Esrrb	intron	ENSMUSG00000021255	NonProperStrand	14	1	-18.6590
chr11	120209165	120209358	protein_coding	Actg1	exon	ENSMUSG00000062825	ProperStrand	178	chr7	148634779	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-2.0632
chr4	131865449	131865509	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	chr9	15118520	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	1	-0.8180
chrX	156315499	156315519	protein_coding	Sh3kbp1	intron	ENSMUSG00000040990	ProperStrand	67	chr4	132394376	132394453	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	1	-8.9164
chr12	111929719	111931964	protein_coding	Hsp90aa1	utr3	ENSMUSG00000021270	ProperStrand	751	chr16	23111691	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	12	-2.3836
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr5	23358027	23358059	snoRNA	ENSMUSG00000093321_Snord93	.	ENSMUSG00000093321	ProperStrand	218	1	-4.5100
chr14	71061146	71061162	protein_coding	Xpo7	utr3	ENSMUSG00000022100	ProperStrand	109	chr3	123210854	123210974	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.1763
chr10	93027468	93027485	protein_coding	Ccdc38	intron	ENSMUSG00000036168	ProperStrand	12	chr1	88252852	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-9.9014
chr4	140258195	140258229	protein_coding	Rcc2	exon	ENSMUSG00000040945	ProperStrand	228	chr19	8799052	8799091	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-3.2956
chr3	90016607	90016656	protein_coding	Rps27	utr3	ENSMUSG00000090733	ProperStrand	40	chr4	131865908	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.4299
chr11	3550372	3550390	protein_coding	Morc2a	utr5	ENSMUSG00000034543	ProperStrand	62	chr10	90581034	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-4.7440
chr18	10052128	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr1	162968218	162968259	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-2.5587
chr15	86001302	86001318	protein_coding	Cerk	intron	ENSMUSG00000035891	NonProperStrand	9	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-11.6174
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr5	89206421	89206438	protein_coding	Dck	intron	ENSMUSG00000029366	ProperStrand	12	1	-16.4531
chr2	158185554	158185652	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr8	13876178	13876226	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-1.0374
chr3	27455070	27519567	protein_coding	Fndc3b	exon	ENSMUSG00000039286	ProperStrand	31	chr12	88778665	88778745	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-7.8163
chr2	71185039	71185056	protein_coding	Slc25a12	intron	ENSMUSG00000027010	ProperStrand	6	chr11	97643043	97643133	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	1	-12.6082
chr7	133940148	133940238	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	chr8	97347017	97347098	protein_coding	Ciapin1	exon	ENSMUSG00000031781	ProperStrand	24	1	-10.1900
chr1	64780047	64783286	protein_coding	Fzd5	utr5	ENSMUSG00000045005	ProperStrand	175	chr11	69483136	69483226	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	4	-4.2064
chr1	90123798	90124639	protein_coding	Heatr7b1	utr5	ENSMUSG00000079429	ProperStrand	147	chr2	26493392	26493487	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-2.1617
chr13	99626872	99628372	protein_coding	Tnpo1	exon	ENSMUSG00000009470	ProperStrand	56	chr9	120039540	120039620	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.4449
chr11	74743737	74743827	protein_coding	Smg6	exon	ENSMUSG00000038290	ProperStrand	29	chr3	123210903	123210983	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.3336
chr8	122040430	122040447	protein_coding	Mbtps1	utr3	ENSMUSG00000031835	NonProperStrand	16	chr4	131865854	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.1079
chr11	102116354	102116454	protein_coding	BC030867	exon	ENSMUSG00000034773	ProperStrand	10	chr15	101919443	101920334	protein_coding	Eif4b	exon	ENSMUSG00000058655	ProperStrand	484	1	-12.7966
chr4	134774542	134774569	protein_coding	Clic4	exon	ENSMUSG00000037242	ProperStrand	84	chr16	23111445	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.8324
chr17	35213842	35213882	protein_coding	Ly6g6e	utr5	ENSMUSG00000013766	ProperStrand	6	chr18	36441039	36441055	protein_coding	Pura	utr5	ENSMUSG00000043991	NonProperStrand	2	1	-inf
chr1	84746972	84747006	protein_coding	Trip12	exon	ENSMUSG00000026219	ProperStrand	248	chr5	100831275	100833040	protein_coding	Sec31a	exon	ENSMUSG00000035325	ProperStrand	61	1	-10.4347
chr4	56910508	56910588	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	chr9	64143786	64143876	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-1.1991
chr8	97622737	97622837	protein_coding	Katnb1	utr3	ENSMUSG00000031787	ProperStrand	8	chr4	116826700	116826764	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-10.8996
chr13	107737212	107737228	protein_coding	Dimt1	utr5	ENSMUSG00000021692	ProperStrand	185	chr8	122129036	122129052	protein_coding	Taf1c	utr5	ENSMUSG00000031832	ProperStrand	26	1	-12.7456
chr4	44038356	44038372	protein_coding	Clta	exon	ENSMUSG00000028478	ProperStrand	59	chr9	120039567	120039627	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.3493
chr2	91398325	91398345	protein_coding	Ckap5	intron	ENSMUSG00000040549	ProperStrand	53	chr4	131865868	131865989	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-5.4561
chr15	77597977	77597993	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr5	111206763	111208731	protein_coding	Pus1	exon	ENSMUSG00000029507	ProperStrand	10	1	-12.4699
chr3	67241918	67241971	protein_coding	Gfm1	intron	ENSMUSG00000027774	ProperStrand	31	chr1	173041631	173041649	tRNA	tRNA710-ValCAC	.	268424	ProperStrand	206	1	-12.1741
chr16	20684362	20684387	snoRNA	ENSMUSG00000077239_Snord66	.	ENSMUSG00000077239	ProperStrand	159	chr18	35714144	35714257	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-3.2539
chr2	158185522	158185550	lincRNA	9430008C03Rik	exon	ENSMUSG00000085385	ProperStrand	1039	chr14	33896904	33896920	protein_coding	Wdfy4	exon	ENSMUSG00000051506	NonProperStrand	11	1	-11.0692
chr2	13966451	13966793	protein_coding	Ptpla	exon	ENSMUSG00000063275	ProperStrand	1	chr2	73275191	73275207	protein_coding	Wipf1	exon	ENSMUSG00000075284	NonProperStrand	8	1	-inf
chr1	52243370	52243389	protein_coding	Gls	utr3	ENSMUSG00000026103	ProperStrand	56	chr7	104810237	104810327	protein_coding	Rsf1	exon	ENSMUSG00000035623	ProperStrand	48	14	-18.7610
chr2	129655188	129655214	protein_coding	Stk35	utr3	ENSMUSG00000037885	ProperStrand	28	chr10	5992882	5992982	protein_coding	Akap12	exon	ENSMUSG00000038587	ProperStrand	1008	1	-9.2085
chr14	64829132	64829149	protein_coding	Msra	intron	ENSMUSG00000054733	NonProperStrand	84	chr9	120039597	120039642	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.7182
chr17	4082112	4082193	LINE	L1Md_A	L1	chr17L1Md_A4082095	NonProperStrand	28	chr16	23110902	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-5.2588
chr5	42136454	42136473	Low_complexity	GA-rich	Low_complexity	chr5GA-rich42136449	NonProperStrand	106	chr11	78313939	78313956	protein_coding	Vtn	exon	ENSMUSG00000017344	ProperStrand	188	1	-9.8797
chr1	145497018	145497035	protein_coding	Cdc73	intron	ENSMUSG00000026361	ProperStrand	22	chr7	121417360	121417419	protein_coding	Psma1	exon	ENSMUSG00000030751	ProperStrand	9	2	-inf
chr5	100855902	100855943	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr19	37087828	37087945	protein_coding	Btaf1	utr3	ENSMUSG00000040565	ProperStrand	23	1	-8.5617
chr13	3581184	3581201	protein_coding	BC016423	exon	ENSMUSG00000033799	ProperStrand	15	chr4	135608572	135608588	protein_coding	Rpl11	exon	ENSMUSG00000059291	ProperStrand	152	1	-14.2712
chr2	144087325	144087425	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	chr10	23506278	23506334	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	3	-3.0647
chr2	69689832	69689848	Other	RMER1A	Other	chr2RMER1A69689105	ProperStrand	2	chr9	120039567	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-10.6072
chr5	123252882	123256312	protein_coding	Anapc5	exon	ENSMUSG00000029472	ProperStrand	92	chr11	69481387	69481467	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-2.4495
chr17	27890775	27890825	protein_coding	D17Wsu92e	utr3	ENSMUSG00000056692	ProperStrand	61	chr7	116663634	116663724	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-4.3854
chr2	166775270	166775323	protein_coding	Stau1	exon	ENSMUSG00000039536	ProperStrand	8	chr11	69483189	69483279	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-10.4333
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr8	74446729	74446745	protein_coding	Zfp617	intron	ENSMUSG00000066880	NonProperStrand	208	1	-4.7991
chr6	85417117	85417137	protein_coding	Cct7	exon	ENSMUSG00000030007	ProperStrand	173	chr9	15119353	15119426	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	3	-7.8859
chr5	116872756	116872846	protein_coding	Hspb8	utr5	ENSMUSG00000041548	ProperStrand	8	chr17	24857744	24857826	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-10.1634
chr16	73486153	73486170	LTR	RMER13A	ERVK	chr16RMER13A73485938	ProperStrand	1	chr7	116663711	116663758	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-inf
chr13	47197393	47200986	protein_coding	Dek	exon	ENSMUSG00000021377	ProperStrand	36	chr2	144087419	144087450	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-7.5639
chr5	109124122	109132306	protein_coding	Fgfrl1	exon	ENSMUSG00000008090	ProperStrand	111	chr14	105686882	105686954	protein_coding	Ndfip2	exon	ENSMUSG00000053253	ProperStrand	11	1	-15.5366
chr11	62416950	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	chr13	49779667	49779745	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	7	-7.9919
chr5	138800435	138800512	SINE	B4	B4	chr5B4138800420	NonProperStrand	1	chr11	97643000	97643090	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-inf
chr13	54723202	54723218	protein_coding	Faf2	exon	ENSMUSG00000025873	ProperStrand	90	chr18	50024540	50024582	protein_coding	Dmxl1	exon	ENSMUSG00000037416	ProperStrand	27	1	-14.1180
chr4	55403930	55404006	protein_coding	Rad23b	utr3	ENSMUSG00000028426	ProperStrand	86	chr7	52381972	52382000	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-6.0013
chr7	120981257	120981276	protein_coding	Spon1	intron	ENSMUSG00000038156	ProperStrand	6	chr9	15119631	15119693	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-7.1405
chr16	24984504	24984520	protein_coding	Lpp	utr3	ENSMUSG00000033306	NonProperStrand	189	chr15	79908929	79909011	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	2	-5.6380
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr8	59991434	59991450	protein_coding	Hmgb2	exon	ENSMUSG00000054717	NonProperStrand	96	1	-8.4283
chr18	38116113	38116129	protein_coding	Rell2	exon	ENSMUSG00000044024	NonProperStrand	43	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-9.5966
chr7	51745766	51745856	protein_coding	2310044H10Rik	utr3	ENSMUSG00000008140	ProperStrand	14	chr19	8963097	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.9719
chr11	100987586	100987616	protein_coding	Tubg1	utr3	ENSMUSG00000035198	ProperStrand	8	chr5	111121066	111121192	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-10.5473
chr11	70468117	70468134	protein_coding	Pfn1	utr5	ENSMUSG00000018293	ProperStrand	55	chr4	131908817	131908869	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.3443
chr18	10052131	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr7	103995042	103995058	protein_coding	Odz4	intron	ENSMUSG00000048078	ProperStrand	93	1	-7.9249
chr12	84023953	84023971	protein_coding	Rgs6	intron	ENSMUSG00000021219	NonProperStrand	65	chr8	114244010	114244094	protein_coding	Bcar1	intron	ENSMUSG00000031955	ProperStrand	44	1	-13.7822
chr7	133939140	133939220	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	chr9	72704642	72704732	protein_coding	Prtg	exon	ENSMUSG00000036030	ProperStrand	34	2	-15.0078
chr13	41922627	41922644	protein_coding	9530008L14Rik	intron	ENSMUSG00000058022	NonProperStrand	22	chr9	15119665	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.4840
chr15	91668777	91668794	protein_coding	Muc19	utr5	ENSMUSG00000044021	NonProperStrand	2	chr8	73419712	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-10.3981
chr1	96185161	96185251	LTR	RLTR6_Mm	ERV1	chr1RLTR6_Mm96184958	ProperStrand	1	chr2	177637867	177637947	protein_coding	Gm14327	intron	ENSMUSG00000074521	ProperStrand	1	1	-inf
chr14	75743641	75743695	protein_coding	Zc3h13	utr3	ENSMUSG00000022000	ProperStrand	42	chr4	131908689	131908749	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-4.9867
chrX	148460952	148461110	protein_coding	Smc1a	exon	ENSMUSG00000041133	ProperStrand	104	chr7	117189920	117190010	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.3653
chr2	29926073	29926460	protein_coding	Set	exon	ENSMUSG00000054766	ProperStrand	167	chr17	35299503	35299603	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-2.8783
chr11	101327210	101327242	protein_coding	Vat1	exon	ENSMUSG00000034993	ProperStrand	69	chr7	148634774	148634836	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-6.3021
chr5	147646738	147646828	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	chr17	35087897	35087948	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-0.7449
chr7	125252626	125252706	protein_coding	Rps15a	exon	ENSMUSG00000008683	ProperStrand	28	chr8	73419657	73419747	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-10.9753
chr1	72871258	72896269	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	chr7	116663683	116663769	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	4	-1.5262
chr17	15842394	15842413	protein_coding	Chd1	intron	ENSMUSG00000023852	NonProperStrand	5	chr1	88252846	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-11.7839
chr7	99817107	99817142	protein_coding	Pcf11	intron	ENSMUSG00000041328	ProperStrand	27	chr11	6428077	6428155	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.6948
chr5	29800643	29800661	protein_coding	Mnx1	exon	ENSMUSG00000001566	ProperStrand	6	chr11	62416575	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-9.8702
chr5	151755615	151755632	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr11	77996560	77996621	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	2	-2.2522
chr6	52141364	52141380	protein_coding	Hoxa4	exon	ENSMUSG00000000942	ProperStrand	2	chr4	116826700	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-14.2248
chr15	79127831	79129513	protein_coding	Pla2g6	exon	ENSMUSG00000042632	ProperStrand	32	chr16	23111777	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.9714
chr4	129522372	129526692	protein_coding	Ptp4a2	exon	ENSMUSG00000028788	ProperStrand	27	chr16	23111394	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-4.4613
chr7	128195743	128200746	protein_coding	Mettl9	exon	ENSMUSG00000030876	ProperStrand	20	chr9	120038469	120038559	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-8.4791
chr4	116991016	116991036	protein_coding	Rnf220	intron	ENSMUSG00000028677	ProperStrand	131	chr17	24665420	24665445	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-3.4673
chr16	31856552	31857655	protein_coding	Dlg1	exon	ENSMUSG00000022770	ProperStrand	69	chr9	71476771	71476868	protein_coding	Cgnl1	utr3	ENSMUSG00000032232	ProperStrand	46	1	-13.5710
chr17	88045505	88045585	protein_coding	Epcam	exon	ENSMUSG00000045394	ProperStrand	43	chr19	8963042	8963132	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.8490
chr8	98377209	98377299	protein_coding	Slc38a7	intron	ENSMUSG00000036534	ProperStrand	25	chr9	78326602	78326645	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-8.0855
chr11	82597075	82597132	protein_coding	Lig3	exon	ENSMUSG00000020697	ProperStrand	34	chr7	116663718	116663767	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-6.0227
chr11	48622675	48622743	protein_coding	Trim41	exon	ENSMUSG00000040365	ProperStrand	11	chr9	120038024	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-8.1004
chr8	112363246	112363275	snoRNA	ENSMUSG00000077549_Snord71	.	ENSMUSG00000077549	ProperStrand	196	chr14	52829459	52829570	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-5.8587
chr6	120815604	120815667	protein_coding	Bcl2l13	exon	ENSMUSG00000009112	ProperStrand	18	chr11	106362327	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-8.2541
chr5	123093961	123094035	protein_coding	P2rx7	utr5	ENSMUSG00000029468	ProperStrand	8	chr16	23110840	23110890	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.2180
chr8	104510035	104510052	LINE	L1_Rod	L1	chr8L1_Rod104509928	NonProperStrand	26	chr11	51551279	51551348	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	2	-14.8805
chr12	102199364	102199383	protein_coding	Ccdc88c	intron	ENSMUSG00000021182	ProperStrand	151	chr12	17552960	17553029	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	2	-5.7138
chr7	20367903	20367921	protein_coding	Cblc	intron	ENSMUSG00000040525	NonProperStrand	19	chr1	162965531	162965559	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.4761
chr3	36933527	36933544	protein_coding	4932438A13Rik	exon	ENSMUSG00000037270	ProperStrand	96	chr17	24857725	24857851	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-2.8969
chr3	9647098	9647188	LTR	ORR1D2	MaLR	chr3ORR1D29647058	ProperStrand	1	chr7	116664794	116664874	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-inf
chr3	157717778	157729979	protein_coding	Lrrc40	intron	ENSMUSG00000063052	ProperStrand	147	chr18	35716681	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-1.7716
chr2	90235322	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	106672523	106672539	protein_coding	Ccdc45	exon	ENSMUSG00000018372	ProperStrand	17	1	-6.9523
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr1	72871444	72871535	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	1	-4.8292
chr5	130338945	130339016	protein_coding	Sumf2	utr3	ENSMUSG00000025538	ProperStrand	20	chr10	11088321	11088340	protein_coding	Epm2a	intron	ENSMUSG00000055493	ProperStrand	28	2	-20.0794
chr5	125467330	125467347	LTR	ORR1E	MaLR	chr5ORR1E125467249	ProperStrand	1	chr3	108357532	108357590	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-inf
chr4	116213709	116213775	SINE	ID4	ID	chr4ID4116213724	ProperStrand	7	chr7	116663637	116663683	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	7	-inf
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr9	114470186	114470203	protein_coding	Trim71	intron	ENSMUSG00000079259	ProperStrand	162	1	-5.8310
chr6	96322858	96322874	protein_coding	Fam19a1	intron	ENSMUSG00000059187	NonProperStrand	60	chr8	73419657	73419735	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.1303
chr10	90432659	90432678	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	chr1	135285746	135285764	protein_coding	Sox13	intron	ENSMUSG00000070643	NonProperStrand	12	1	-13.9026
chr2	74368583	74369959	protein_coding	Lnp	exon	ENSMUSG00000009207	ProperStrand	4	chr2	26766780	26766801	snoRNA	ENSMUSG00000065258_SNORD24	.	ENSMUSG00000065258	ProperStrand	130	3	-19.6805
chr4	43505749	43505839	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr11	19962875	19962906	protein_coding	Actr2	utr3	ENSMUSG00000020152	ProperStrand	72	6	-15.3762
chr11	102168302	102168397	protein_coding	Ubtf	exon	ENSMUSG00000020923	ProperStrand	66	chr17	39985161	39985225	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-5.7450
chr17	75938033	75938049	protein_coding	Fam98a	exon	ENSMUSG00000002017	ProperStrand	22	chr7	52382237	52382254	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-10.3101
chr1	134465558	134465574	protein_coding	Nfasc	utr3	ENSMUSG00000026442	NonProperStrand	48	chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	1	-11.0682
chr14	54862460	54862532	protein_coding	Dad1	exon	ENSMUSG00000022174	ProperStrand	11	chr1	88247740	88247800	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	5	-inf
chr11	76231837	76231916	protein_coding	Abr	utr3	ENSMUSG00000017631	ProperStrand	33	chr2	26494750	26494840	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-7.0792
chr18	10813030	10813069	protein_coding	Mib1	utr3	ENSMUSG00000024294	ProperStrand	27	chr6	71832550	71832577	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	3	-16.3175
chr15	79260171	79260244	protein_coding	Csnk1e	exon	ENSMUSG00000022433	ProperStrand	59	chr7	29136543	29136633	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.3933
chr2	181316563	181316579	protein_coding	Uckl1	exon	ENSMUSG00000089917	ProperStrand	142	chr3	123210930	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-0.8461
chr11	107598097	107598114	protein_coding	Cacng4	exon	ENSMUSG00000020723	ProperStrand	7	chrX	84483696	84483713	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-12.6702
chr5	116013337	116013437	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	chr2	63936036	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-4.7616
chr13	21872165	21872268	protein_coding	Hist1h1b	exon	ENSMUSG00000058773	ProperStrand	65	chr15	34370636	34370665	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-5.8082
chr17	39666709	39666799	LINE	Lx5	L1	chr17Lx539666693	NonProperStrand	1	chr17	39666327	39666407	LINE	Lx7	L1	chr17Lx739666135	ProperStrand	1	1	-inf
chr11	50110776	50110856	protein_coding	Canx	exon	ENSMUSG00000020368	ProperStrand	296	chr2	29926019	29926440	protein_coding	Set	exon	ENSMUSG00000054766	ProperStrand	167	1	-8.0673
chr15	82980098	82980188	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr9	15119319	15119427	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	11	-11.1890
chr2	91770146	91770166	protein_coding	Mdk	utr3	ENSMUSG00000027239	ProperStrand	56	chr15	79913288	79913342	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-6.3001
chr13	55905865	55905883	protein_coding	Catsper3	intron	ENSMUSG00000021499	NonProperStrand	7	chr6	115755608	115757005	protein_coding	Rpl32	exon	ENSMUSG00000057841	ProperStrand	137	2	-inf
chr12	55796767	55796784	protein_coding	Eapp	utr5	ENSMUSG00000054302	NonProperStrand	62	chr11	106362639	106362692	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-7.3391
chr14	124243064	124243085	protein_coding	Itgbl1	exon	ENSMUSG00000032925	ProperStrand	159	chr8	73419683	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-1.5170
chr13	6589838	6589882	protein_coding	Pfkp	intron	ENSMUSG00000021196	ProperStrand	197	chr18	66304804	66304820	protein_coding	Ccbe1	intron	ENSMUSG00000046318	ProperStrand	7	1	-15.3495
chr18	69841399	69841480	protein_coding	Tcf4	intron	ENSMUSG00000053477	ProperStrand	13	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-8.2769
chr4	94269672	94269693	protein_coding	Plaa	exon	ENSMUSG00000028577	ProperStrand	40	chr16	9993997	9994013	protein_coding	Grin2a	intron	ENSMUSG00000059003	ProperStrand	10	1	-17.8218
chr4	131865867	131865917	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	NonProperStrand	39	chr3	68889145	68889204	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	NonProperStrand	26	2	-19.0605
chr1	180260438	180262075	protein_coding	Hnrnpu	exon	ENSMUSG00000039630	ProperStrand	286	chr7	116663634	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	4	-2.5633
chr16	17026139	17026456	protein_coding	Mapk1	exon	ENSMUSG00000063358	ProperStrand	67	chr17	24665420	24665443	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	15	-19.2201
chr14	76840199	76840257	protein_coding	Tsc22d1	intron	ENSMUSG00000022010	ProperStrand	86	chr8	73008538	73008634	protein_coding	Tmem59l	exon	ENSMUSG00000035964	ProperStrand	2	1	-inf
chr7	133939150	133939239	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	chr1	162966812	162966855	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-1.7218
chr4	133801679	133801695	lincRNA	E130218I03Rik	exon	ENSMUSG00000086322	NonProperStrand	43	chr16	67122969	67122986	protein_coding	Cadm2	intron	ENSMUSG00000064115	NonProperStrand	21	1	-16.1392
chr15	35308715	35308749	protein_coding	Vps13b	utr5	ENSMUSG00000037646	ProperStrand	56	chr12	106269467	106269557	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	2	-7.1415
chr19	27497154	27497185	protein_coding	D19Bwg1357e	exon	ENSMUSG00000041360	ProperStrand	110	chr3	68889088	68889140	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-2.2025
chr8	86095683	86095718	protein_coding	Tecr	utr3	ENSMUSG00000031708	ProperStrand	100	chr19	9042847	9043880	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	2	-13.4282
chr6	39562123	39562213	protein_coding	Braf	intron	ENSMUSG00000002413	ProperStrand	7	chr16	18240845	18240925	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	1	-13.5517
chr16	33625246	33646649	protein_coding	Slc12a8	exon	ENSMUSG00000035506	ProperStrand	52	chr17	35299561	35299633	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	3	-11.9158
chr16	10784375	10784465	protein_coding	Socs1	exon	ENSMUSG00000038037	ProperStrand	1	chr14	33005151	33005231	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-inf
chr13	47135579	47135595	protein_coding	Tpmt	intron	ENSMUSG00000021376	NonProperStrand	1	chr10	110918549	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-inf
chr18	40367517	40370457	protein_coding	Yipf5	exon	ENSMUSG00000024487	ProperStrand	8	chrX	34622906	34622988	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-7.1329
chr1	164644383	164644435	protein_coding	Prrc2c	exon	ENSMUSG00000040225	ProperStrand	413	chr2	91436233	91436323	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-3.7563
chr2	30814075	30814149	protein_coding	Tor1b	utr3	ENSMUSG00000026848	ProperStrand	6	chr7	149170854	149171340	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	1	-15.9930
chr11	97642952	97643069	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	chr4	122970400	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	10	-1.1259
chr5	31479295	31479360	protein_coding	Gtf3c2	intron	ENSMUSG00000029144	ProperStrand	22	chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	1	-13.4686
chr3	146637410	146637426	protein_coding	Ttll7	intron	ENSMUSG00000036745	NonProperStrand	16	chr8	27092644	27092662	protein_coding	4930444A02Rik	utr3	ENSMUSG00000037251	ProperStrand	4	1	-inf
chr9	15123930	15123968	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	NonProperStrand	100	chr17	24857721	24857811	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	3	-4.3698
chr15	30848615	30848640	protein_coding	Ctnnd2	intron	ENSMUSG00000022240	NonProperStrand	12	chr2	69305177	69305259	protein_coding	Lrp2	exon	ENSMUSG00000027070	ProperStrand	35	1	-17.5766
chr9	65044388	65044468	snRNA	ENSMUSG00000075763_U5	.	ENSMUSG00000075763	ProperStrand	216	chr15	98350186	98350276	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-2.4193
chr17	35384119	35384197	snoRNA	ENSMUSG00000065273_SNORD83	.	ENSMUSG00000065273	ProperStrand	244	chr4	131908236	131908409	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	11	-7.5106
chr15	88930447	88930465	protein_coding	1300018J18Rik	utr3	ENSMUSG00000035757	ProperStrand	7	chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	1	-13.9092
chr8	87525135	87525238	protein_coding	Hook2	exon	ENSMUSG00000052566	ProperStrand	204	chr15	5068407	5068480	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-3.7185
chr2	179322377	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr12	114290175	114290191	protein_coding	Pacs2	intron	ENSMUSG00000021143	NonProperStrand	302	1	-7.9804
chr17	86119840	86119857	SINE	B3A	B2	chr17B3A86119758	NonProperStrand	18	chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	1	-13.0627
chr6	125112344	125112528	protein_coding	Gapdh	exon	ENSMUSG00000057666	ProperStrand	356	chr9	64024492	64024567	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	1	-4.8618
chr13	6613964	6618439	protein_coding	Pfkp	exon	ENSMUSG00000021196	ProperStrand	197	chr8	129468745	129468797	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-2.2689
chr18	35740669	35740716	protein_coding	Matr3	intron	ENSMUSG00000037236	ProperStrand	90	chr19	8799851	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-4.1715
chr19	3371665	3375096	protein_coding	Cpt1a	exon	ENSMUSG00000024900	ProperStrand	48	chr17	35299563	35299633	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	3	-12.2383
chr13	61727917	61727996	LTR	ORR1D2-int	MaLR	chr13ORR1D2-int61726901	ProperStrand	1	chr13	61728263	61728353	LTR	ORR1D2	MaLR	chr13ORR1D261728287	ProperStrand	1	1	-inf
chr9	44943310	44943329	protein_coding	Gm10684	utr5	ENSMUSG00000074385	ProperStrand	17	chr12	112779147	112779222	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-7.2771
chr1	33828651	33828669	protein_coding	Zfp451	intron	ENSMUSG00000042197	NonProperStrand	393	chr17	24856690	24856753	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-2.8661
chr15	88582047	88582065	Low_complexity	GC_rich	Low_complexity	chr15GC_rich88582037	ProperStrand	1	chr7	116663633	116663694	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-inf
chr14	22019327	22019344	protein_coding	Adk	intron	ENSMUSG00000039197	ProperStrand	32	chr7	52381719	52381758	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-8.8362
chr1	105634761	105634778	SINE	B4A	B4	chr1B4A105634665	ProperStrand	11	chr5	143668411	143668428	protein_coding	Actb	utr5	ENSMUSG00000029580	ProperStrand	446	1	-12.7594
chr3	87271049	87271074	LTR	RMER17C-int	ERVK	chr3RMER17C-int87270869	ProperStrand	1	chr9	15119646	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-inf
chr17	34983021	34983053	protein_coding	Skiv2l	exon	ENSMUSG00000040356	ProperStrand	8	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-7.5918
chr12	19723413	19723432	LTR	MURVY-int	ERV1	chr12MURVY-int19718193	NonProperStrand	8	chr17	46861595	46861611	protein_coding	Pex6	exon	ENSMUSG00000002763	ProperStrand	292	1	-14.2690
chr14	64538333	64538373	protein_coding	Pinx1	exon	ENSMUSG00000021958	ProperStrand	17	chr16	23110833	23110873	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-5.4260
chr10	21088407	21088460	protein_coding	Hbs1l	utr3	ENSMUSG00000019977	ProperStrand	27	chr10	23505152	23505218	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.4811
chr11	88798335	88802650	protein_coding	Scpep1	exon	ENSMUSG00000000278	ProperStrand	54	chr5	148338528	148338544	protein_coding	Pan3	exon	ENSMUSG00000029647	ProperStrand	57	2	-19.2513
chr11	66270312	66270331	protein_coding	Shisa6	intron	ENSMUSG00000053930	NonProperStrand	8	chr12	17552949	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	4	-20.1497
chr12	71282557	71282579	protein_coding	Abhd12b	intron	ENSMUSG00000090121	NonProperStrand	2	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-8.7800
chr2	26250967	26251066	protein_coding	Pmpca	exon	ENSMUSG00000026926	ProperStrand	45	chr9	14555362	14555378	protein_coding	Fut4	exon	ENSMUSG00000049307	NonProperStrand	19	1	-16.2377
chr4	148307558	148307638	protein_coding	Casz1	exon	ENSMUSG00000028977	ProperStrand	27	chr4	131908716	131908806	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.4692
chr9	104101037	104101059	protein_coding	Dnajc13	exon	ENSMUSG00000032560	ProperStrand	60	chr9	15119326	15119426	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-5.1087
chr11	79845540	79845562	protein_coding	Suz12	exon	ENSMUSG00000017548	ProperStrand	53	chr19	8963053	8963172	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-4.3907
chr7	3655661	3655941	protein_coding	Rps9	utr5	ENSMUSG00000006333	ProperStrand	87	chr11	98878342	98878411	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-5.5550
chr2	9985893	9990298	protein_coding	Atp5c1	exon	ENSMUSG00000025781	ProperStrand	138	chr18	35716838	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-0.9556
chr11	118635774	118635795	protein_coding	Rbfox3	intron	ENSMUSG00000025576	ProperStrand	19	chr9	72584502	72584581	protein_coding	Nedd4	exon	ENSMUSG00000032216	ProperStrand	308	2	-18.8104
chr17	34089461	34089479	protein_coding	Rps18	exon	ENSMUSG00000008668	ProperStrand	111	chr10	118645341	118645402	protein_coding	Cand1	exon	ENSMUSG00000020114	ProperStrand	76	1	-11.6021
chr16	23110454	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	chr17	35384119	35384195	snoRNA	ENSMUSG00000065273_SNORD83	.	ENSMUSG00000065273	ProperStrand	244	2	-1.1499
chr11	91336379	91336459	LINE	L1Md_F2	L1	chr11L1Md_F291336302	NonProperStrand	1	chr7	82181078	82181168	LINE	L1Md_F3	L1	chr7L1Md_F382181072	NonProperStrand	2	1	-inf
chr6	44165620	44165710	LINE	L1_Mus2	L1	chr6L1_Mus244165417	NonProperStrand	1	chrX	6532895	6532975	LINE	L1_Mus1	L1	chrXL1_Mus16532398	NonProperStrand	1	1	-inf
chr5	108698333	108698423	protein_coding	Dr1	utr5	ENSMUSG00000029265	ProperStrand	11	chr7	148634712	148634792	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-7.3454
chr11	98878376	98878466	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	chr2	37255621	37255644	snoRNA	ENSMUSG00000077756_Snord90	.	ENSMUSG00000077756	ProperStrand	167	1	-4.3005
chr14	63770035	63770100	protein_coding	Fdft1	exon	ENSMUSG00000021273	ProperStrand	37	chr14	76247717	76247752	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-8.4175
chr9	88421608	88421637	snRNA	ENSMUSG00000084703_U4	.	ENSMUSG00000084703	NonProperStrand	1	chr9	120037963	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	NonProperStrand	19	1	-inf
chr19	8963072	8963162	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	chr13	90238584	90238667	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	8	-2.1840
chr1	134886033	134886133	LTR	ORR1D1	MaLR	chr1ORR1D1134886048	NonProperStrand	3	chr16	23110986	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr6	142441015	142441052	protein_coding	Ldhb	exon	ENSMUSG00000030246	ProperStrand	224	chr11	59778155	59778172	protein_coding	Rasd1	exon	ENSMUSG00000049892	ProperStrand	4	1	-16.3463
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr2	26767041	26767564	protein_coding	Rpl7a	exon	ENSMUSG00000062647	ProperStrand	234	4	-12.2719
chr1	31006427	31006527	protein_coding	Ptp4a1	utr5	ENSMUSG00000026064	ProperStrand	26	chr11	69481335	69481375	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-4.7771
chr18	35714262	35714291	lincRNA	Snhg4	intron	ENSMUSG00000090430	ProperStrand	270	chr4	149111957	149112057	protein_coding	Tmem201	utr5	ENSMUSG00000044700	ProperStrand	60	1	-10.2982
chr12	107023201	107023220	protein_coding	Papola	intron	ENSMUSG00000021111	ProperStrand	67	chr10	41644311	41644329	protein_coding	Armc2	exon	ENSMUSG00000071324	ProperStrand	281	1	-9.9968
chr5	53180063	53180153	protein_coding	Zcchc4	intron	ENSMUSG00000029179	ProperStrand	15	chr11	97642956	97643036	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-5.0602
chr2	99100041	99100131	LINE	L1Md_F2	L1	chr2L1Md_F299099732	ProperStrand	1	chr7	61465270	61465350	LINE	L1Md_F2	L1	chr7L1Md_F261465221	ProperStrand	1	1	-inf
chr1	82748409	82748509	protein_coding	Mff	utr3	ENSMUSG00000026150	ProperStrand	12	chr16	23110977	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.4686
chr18	70728114	70728133	protein_coding	Mbd2	utr5	ENSMUSG00000024513	NonProperStrand	13	chr13	102469857	102469873	protein_coding	Pik3r1	intron	ENSMUSG00000041417	ProperStrand	3	1	-inf
chr4	135607194	135607541	protein_coding	Rpl11	exon	ENSMUSG00000059291	ProperStrand	152	chr11	55296277	55296315	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-4.3778
chr3	88369623	88369723	protein_coding	Ubqln4	exon	ENSMUSG00000008604	ProperStrand	49	chr9	120038609	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.4063
chr16	34203536	34203553	protein_coding	Kalrn	intron	ENSMUSG00000061751	NonProperStrand	52	chr5	115939505	115939584	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-8.1517
chr17	35822057	35822256	protein_coding	Ddr1	exon	ENSMUSG00000003534	ProperStrand	129	chr5	74489642	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-2.4109
chr17	35032642	35032732	protein_coding	Zbtb12	exon	ENSMUSG00000049823	ProperStrand	6	chr8	128986215	128986295	protein_coding	Gm17296	intron	ENSMUSG00000090290	ProperStrand	6	1	-18.9143
chr2	150639675	150639706	protein_coding	Pygb	exon	ENSMUSG00000033059	ProperStrand	6	chr14	77433105	77433123	protein_coding	9030625A04Rik	exon	ENSMUSG00000044350	ProperStrand	2	1	-inf
chrX	67458741	67458757	LINE	Lx8	L1	chrXLx867458264	NonProperStrand	35	chr2	121879041	121879066	protein_coding	Eif3j	utr3	ENSMUSG00000027236	ProperStrand	15	1	-17.2690
chr10	120848786	120848889	protein_coding	Rassf3	utr3	ENSMUSG00000025795	ProperStrand	26	chr5	74489645	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-5.3862
chr13	104813752	104813781	protein_coding	Nln	utr3	ENSMUSG00000021710	ProperStrand	47	chr1	59761640	59761716	snoRNA	ENSMUSG00000089093_Snord11	.	ENSMUSG00000089093	ProperStrand	193	1	-11.4624
chr4	131865380	131865507	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	chr19	8799021	8799093	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	9	-0.9420
chr13	107697842	107697922	protein_coding	Ipo11	intron	ENSMUSG00000042590	ProperStrand	120	chr19	8963087	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-3.7266
chr7	50784354	50784372	protein_coding	Cd33	exon	ENSMUSG00000004609	ProperStrand	23	chr1	162966812	162966836	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-8.1781
chr5	120132844	120132944	protein_coding	Tbx3	exon	ENSMUSG00000018604	ProperStrand	87	chr2	166890504	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-6.8189
chr16	24530435	24530503	protein_coding	Lpp	intron	ENSMUSG00000033306	ProperStrand	38	chr7	52378398	52378454	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	1	-9.4227
chr7	86287309	86287409	protein_coding	Mfge8	exon	ENSMUSG00000030605	ProperStrand	73	chr7	52382755	52382802	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	2	-10.3042
chr1	152268927	152269668	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	chr6	29075479	29075501	protein_coding	Rbm28	exon	ENSMUSG00000029701	ProperStrand	24	1	-10.7598
chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	chr11	98878341	98878371	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-1.6191
chr1	94949108	94950844	protein_coding	Kif1a	exon	ENSMUSG00000014602	ProperStrand	18	chr13	51743641	51743703	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	3	-19.7259
chr7	134110716	134111233	protein_coding	Sez6l2	exon	ENSMUSG00000030683	ProperStrand	94	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-8.0288
chr15	10376888	10376909	protein_coding	Dnajc21	exon	ENSMUSG00000044224	ProperStrand	17	chr19	8963027	8963164	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.5881
chr4	128867196	128867212	protein_coding	Yars	exon	ENSMUSG00000028811	ProperStrand	131	chr4	116828389	116828452	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-6.8285
chr2	26493473	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr17	56577330	56577346	protein_coding	Ptprs	exon	ENSMUSG00000013236	ProperStrand	152	1	-4.3919
chr14	51427244	51427344	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	2	-3.6089
chr17	32366401	32366531	protein_coding	Brd4	exon	ENSMUSG00000024002	ProperStrand	121	chr3	152450609	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	2	-11.8648
chr5	136707644	136707662	protein_coding	Sh2b2	exon	ENSMUSG00000005057	NonProperStrand	101	chr11	97642952	97643089	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.6318
chr10	79173634	79174538	protein_coding	Bsg	exon	ENSMUSG00000023175	ProperStrand	107	chr4	131908689	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-1.1927
chr4	134029286	134029366	protein_coding	Stmn1	utr3	ENSMUSG00000028832	ProperStrand	54	chr15	98350179	98350269	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-4.9640
chr1	133193920	133193972	protein_coding	Srgap2	intron	ENSMUSG00000026425	ProperStrand	299	chr11	69481369	69481459	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-0.7515
chr4	140121137	140121153	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	chr4	122970459	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	2	-9.4420
chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	chr5	109158932	109158982	protein_coding	Rnf212	intron	ENSMUSG00000055385	ProperStrand	2	2	-inf
chr18	63109676	63109692	protein_coding	Apcdd1	exon	ENSMUSG00000071847	NonProperStrand	254	chr9	120039533	120039584	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.0205
chr13	59578452	59578472	protein_coding	Agtpbp1	exon	ENSMUSG00000021557	ProperStrand	35	chr4	131908359	131908417	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.2627
chr8	108233711	108233729	protein_coding	4933405L10Rik	exon	ENSMUSG00000013158	ProperStrand	94	chr1	74572522	74572576	protein_coding	Rqcd1	intron	ENSMUSG00000026174	ProperStrand	16	1	-15.0828
chr10	84189757	84189782	protein_coding	Polr3b	utr3	ENSMUSG00000034453	ProperStrand	41	chr19	8800419	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-4.2442
chr2	90235315	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr15	64013027	64013043	protein_coding	Asap1	intron	ENSMUSG00000022377	NonProperStrand	47	1	-4.9327
chr8	123064090	123064107	protein_coding	Gse1	intron	ENSMUSG00000031822	NonProperStrand	8	chr4	131865867	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.4974
chr17	23737900	23742507	protein_coding	Zscan10	utr5	ENSMUSG00000023902	ProperStrand	9	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-11.1070
chr9	57385425	57385441	protein_coding	2310046O06Rik	utr5	ENSMUSG00000032305	ProperStrand	135	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-6.1332
chr17	46692479	46692559	protein_coding	Srf	exon	ENSMUSG00000015605	ProperStrand	11	chr7	134671427	134671517	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-11.3278
chr3	134883798	134883859	protein_coding	Cenpe	intron	ENSMUSG00000045328	ProperStrand	71	chr5	33134309	33134329	protein_coding	C330019G07Rik	utr3	ENSMUSG00000054280	ProperStrand	22	2	-inf
chr14	47948933	47948949	LTR	RMER17A2	ERVK	chr14RMER17A247948307	NonProperStrand	43	chr3	123068313	123068376	protein_coding	Sec24d	utr3	ENSMUSG00000039234	ProperStrand	22	1	-16.0500
chr4	154993213	154993230	protein_coding	Gm10563	intron	ENSMUSG00000073682	ProperStrand	2	chr10	90581034	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-12.1998
chr6	81992905	81992923	protein_coding	Fam176a	intron	ENSMUSG00000035104	ProperStrand	64	chr11	68886945	68887038	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	5	-16.4889
chr12	17287252	17287396	protein_coding	Pdia6	exon	ENSMUSG00000020571	ProperStrand	114	chr16	23111394	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-2.9731
chr2	90235293	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	120889875	120889892	protein_coding	Lhx5	intron	ENSMUSG00000029595	NonProperStrand	106	1	-3.3981
chr4	43505757	43505847	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr8	123112916	123112946	protein_coding	Gins2	utr5	ENSMUSG00000031821	ProperStrand	10	1	-6.5547
chr2	72094556	72094575	protein_coding	Rapgef4	utr3	ENSMUSG00000049044	NonProperStrand	11	chr8	73419657	73419712	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-6.4238
chr9	97169802	97169892	LINE	Lx2B	L1	chr9Lx2B97169704	ProperStrand	1	chr9	113902646	113902726	protein_coding	Fbxl2	intron	ENSMUSG00000032507	ProperStrand	7	1	-inf
chr9	120482715	120482883	protein_coding	Rpl14	exon	ENSMUSG00000025794	ProperStrand	123	chr12	88778631	88778721	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	13	-21.0999
chr6	93654288	93654331	protein_coding	Magi1	exon	ENSMUSG00000045095	ProperStrand	106	chr19	8799044	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	2	-7.8227
chr5	122906516	122906564	protein_coding	Atp2a2	utr3	ENSMUSG00000029467	ProperStrand	166	chr19	8800454	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-3.2647
chr10	80580925	80581894	protein_coding	Map2k2	exon	ENSMUSG00000035027	ProperStrand	26	chr11	69483156	69483236	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.9646
chr18	5049159	5049214	protein_coding	Svil	exon	ENSMUSG00000024236	ProperStrand	19	chr4	131908236	131908315	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.3472
chr17	35296764	35298118	protein_coding	Prrc2a	exon	ENSMUSG00000024393	ProperStrand	315	chr16	23111694	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	7	-3.5321
chr4	130600741	130600758	LTR	MTE2a	MaLR	chr4MTE2a130600703	NonProperStrand	21	chr7	29606451	29606497	protein_coding	Hnrnpl	exon	ENSMUSG00000015165	ProperStrand	150	1	-13.6056
chr11	5773728	5774082	protein_coding	Pold2	exon	ENSMUSG00000020471	ProperStrand	58	chr4	131908687	131908737	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.2702
chr14	24251850	24251866	protein_coding	Kcnma1	intron	ENSMUSG00000063142	NonProperStrand	104	chr1	162965536	162965576	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.3134
chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	chr14	76247724	76247778	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-0.7172
chr15	98686594	98686759	protein_coding	Mll2	exon	ENSMUSG00000048154	ProperStrand	170	chr18	35716706	35716796	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-0.7161
chr9	59512947	59523417	protein_coding	Pkm2	utr5	ENSMUSG00000032294	ProperStrand	1296	chr17	35087894	35087964	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	3	-1.5376
chr7	51747943	51748560	protein_coding	2310044H10Rik	exon	ENSMUSG00000008140	ProperStrand	14	chr18	63109676	63109692	protein_coding	Apcdd1	exon	ENSMUSG00000071847	NonProperStrand	254	1	-13.3856
chr14	17362520	17362536	protein_coding	Rarb	intron	ENSMUSG00000017491	ProperStrand	6	chr7	52378398	52378439	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	1	-13.2603
chr10	126953790	126953836	protein_coding	Ndufa4l2	utr3	ENSMUSG00000040280	ProperStrand	18	chrX	34622905	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-5.4705
chr2	146125209	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	chr4	131908236	131908439	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	6	-3.6174
chr16	16420238	16420255	protein_coding	Fgd4	utr3	ENSMUSG00000022788	NonProperStrand	2	chr10	5991483	5991595	protein_coding	Akap12	exon	ENSMUSG00000038587	ProperStrand	1008	1	-15.1535
chr9	78328391	78328437	protein_coding	Eef1a1	exon	ENSMUSG00000037742	NonProperStrand	16	chr4	131866151	131866251	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	NonProperStrand	19	1	-18.2794
chr10	85515399	85515420	Simple_repeat	(TCTG)n	Simple_repeat	chr10(TCTG)n85515403	NonProperStrand	1	chr17	36000485	36000501	protein_coding	Nrm	exon	ENSMUSG00000059791	ProperStrand	253	1	-inf
chr3	94937207	94937492	polymorphic_pseudogene	Scnm1	.	ENSMUSG00000092607	NonProperStrand	2	chr8	13876179	13876226	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-14.6016
chr9	15121009	15121074	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	chr11	62416625	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-1.9156
chr15	76736349	76736565	protein_coding	Rpl8	exon	ENSMUSG00000003970	ProperStrand	191	chr13	113342177	113342193	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	1	-6.4616
chr10	84619913	84647083	protein_coding	Cry1	exon	ENSMUSG00000020038	ProperStrand	33	chr7	117190032	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	4	-14.2939
chr9	59513161	59513699	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr5	108334196	108334286	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	3	-1.1156
chr8	125019407	125019497	protein_coding	Fam38a	exon	ENSMUSG00000014444	ProperStrand	132	chr9	15118245	15118322	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-2.0928
chr1	172680885	172680901	protein_coding	Atf6	intron	ENSMUSG00000026663	ProperStrand	35	chr4	131908300	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.2627
chr2	79132657	79132674	protein_coding-noncoding	Itga4	utr5	ENSMUSG00000027009	NonProperStrand	118	chr19	9091375	9091522	protein_coding	Ahnak	exon	ENSMUSG00000069833	ProperStrand	103	4	-21.6633
chr9	50816824	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	chr11	120148960	120148976	protein_coding	Bahcc1	exon	ENSMUSG00000039741	NonProperStrand	268	1	-8.8107
chr8	81113822	81113876	protein_coding	Slc10a7	intron	ENSMUSG00000031684	ProperStrand	55	chr7	52276766	52276856	protein_coding	Rras	utr3	ENSMUSG00000038387	ProperStrand	6	2	-19.3386
chr15	85751414	85751430	protein_coding	Celsr1	intron	ENSMUSG00000016028	NonProperStrand	5	chr9	120037906	120037996	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-9.7957
chr3	101383568	101394371	protein_coding	Atp1a1	exon	ENSMUSG00000033161	ProperStrand	316	chr9	120038552	120038642	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	3	-2.1709
chr16	4911431	4911447	protein_coding	Mgrn1	exon	ENSMUSG00000022517	ProperStrand	14	chr4	40649774	40649790	protein_coding	Aptx	utr5	ENSMUSG00000028411	NonProperStrand	1	1	-inf
chr7	30191770	30191860	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	chr2	158182214	158182279	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-1.1615
chr12	8962281	8965615	protein_coding	Matn3	exon	ENSMUSG00000020583	ProperStrand	3	chr18	33954913	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-9.7168
chr8	122606609	122607140	protein_coding	Zdhhc7	exon	ENSMUSG00000031823	ProperStrand	12	chr3	68889026	68889126	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	6	-19.9600
chr5	73563222	73563238	protein_coding	Fryl	intron	ENSMUSG00000070733	ProperStrand	173	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-4.5291
chr11	48616642	48616696	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	chr11	106362340	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-2.1852
chr8	97386516	97386574	protein_coding	Polr2c	exon	ENSMUSG00000031783	ProperStrand	16	chr4	131908349	131908439	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.6705
chr6	56825675	56825775	protein_coding	Fkbp9	exon	ENSMUSG00000029781	ProperStrand	39	chrX	34622906	34622937	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-3.9678
chr17	84236811	84236828	protein_coding	Haao	intron	ENSMUSG00000000673	NonProperStrand	10	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-6.7807
chr13	100204322	100204422	protein_coding	Mtap1b	utr3	ENSMUSG00000052727	ProperStrand	76	chr7	148634788	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-3.5460
chr4	126512929	126513881	protein_coding	AU040320	exon	ENSMUSG00000028830	NonProperStrand	12	chr7	134671419	134671519	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-11.1461
chr10	86161084	86161116	protein_coding	Hsp90b1	exon	ENSMUSG00000020048	ProperStrand	396	chr8	32260335	32260359	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-1.3666
chr1	36335431	36335511	LTR	MT2_Mm	ERVL	chr1MT2_Mm36335224	ProperStrand	1	chr3	10219768	10219858	LTR	MT2_Mm	ERVL	chr3MT2_Mm10219721	ProperStrand	1	1	-inf
chr1	162965536	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr13	46862891	46862991	snoRNA	ENSMUSG00000064558_SNORA55	.	ENSMUSG00000064558	ProperStrand	187	1	-1.3999
chrX	62550392	62550482	LINE	Lx4B	L1	chrXLx4B62549364	ProperStrand	1	chrX	62550856	62550936	LTR	MTE2b	MaLR	chrXMTE2b62550590	ProperStrand	1	1	-inf
chr11	60370927	60370943	protein_coding	Alkbh5	utr3	ENSMUSG00000042650	ProperStrand	203	chr17	35089228	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-3.1834
chr2	62886006	62886022	protein_coding	Kcnh7	intron	ENSMUSG00000059742	NonProperStrand	5	chr12	88778746	88778767	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	2	-18.3570
chr1	56907122	56907139	protein_coding	Satb2	exon	ENSMUSG00000038331	NonProperStrand	24	chr14	76247711	76247784	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-5.9558
chr19	59534008	59534026	protein_coding	Emx2	exon	ENSMUSG00000043969	NonProperStrand	87	chr8	112255721	112255769	protein_coding	Atxn1l	exon	ENSMUSG00000069895	ProperStrand	13	2	-19.2833
chr3	35992331	35992421	protein_coding	Acad9	utr3	ENSMUSG00000027710	ProperStrand	11	chr8	32260341	32260421	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-8.0215
chr11	42440243	42440259	protein_coding	Gabrb2	exon	ENSMUSG00000007653	ProperStrand	248	chr19	8963024	8963183	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-1.6679
chr10	92955313	92957361	protein_coding	Hal	exon	ENSMUSG00000020017	NonProperStrand	1	chr13	53285957	53285978	protein_coding	Ror2	intron	ENSMUSG00000021464	ProperStrand	46	1	-inf
chr14	51427118	51427219	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr15	79913288	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	7	-1.6843
chr16	56701272	56701315	protein_coding	Tfg	exon	ENSMUSG00000022757	ProperStrand	5	chr10	23505152	23505214	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-5.7809
chrX	98791536	98791591	protein_coding	Taf1	exon	ENSMUSG00000031314	ProperStrand	61	chr10	90076969	90076990	protein_coding	Anks1b	intron	ENSMUSG00000058589	NonProperStrand	230	1	-10.5853
chr15	79913288	79913313	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr7	52382237	52382314	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	4	-1.5372
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr7	117189862	117189943	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	2	-1.0271
chr16	10961097	10963422	protein_coding	Litaf	exon	ENSMUSG00000022500	ProperStrand	25	chr17	35089182	35089210	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	2	-11.6396
chr19	44647543	44647561	protein_coding	Hif1an	utr3	ENSMUSG00000036450	ProperStrand	16	chr5	130300436	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.9748
chr5	100855902	100855954	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr2	158054825	158054842	protein_coding	D630003M21Rik	utr5	ENSMUSG00000037813	NonProperStrand	9	1	-10.5034
chrX	11635848	11635865	protein_coding	Bcor	exon	ENSMUSG00000040363	NonProperStrand	293	chr17	39985242	39985287	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-2.9383
chr7	71035760	71035850	protein_coding	Klf13	utr3	ENSMUSG00000052040	ProperStrand	28	chr5	130295414	130295490	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-6.7544
chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr4	117317815	117317928	protein_coding	Eri3	intron	ENSMUSG00000033423	ProperStrand	246	5	-15.4799
chr15	102016457	102016479	protein_coding	Csad	exon	ENSMUSG00000023044	ProperStrand	14	chr11	6428035	6428088	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-9.8477
chr4	149989423	149989505	protein_coding	Rere	exon	ENSMUSG00000039852	ProperStrand	76	chr11	51551280	51551336	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	1	-7.2285
chr13	6598060	6621278	protein_coding	Pfkp	exon	ENSMUSG00000021196	ProperStrand	197	chr18	35716703	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	6	-5.7291
chr9	58833675	58838079	protein_coding	Neo1	exon	ENSMUSG00000032340	ProperStrand	35	chr16	23111695	23111775	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.8115
chr4	79650693	79650734	pseudogene	Gm11410	.	ENSMUSG00000083219	ProperStrand	47	chr4	131908689	131908773	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-4.5914
chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr13	22023035	22023075	tRNA	tRNA983-MetCAT	.	156606	ProperStrand	32	2	-4.9294
chr8	125419408	125419498	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	chr9	85637236	85637316	protein_coding	Ibtk	utr5	ENSMUSG00000035941	ProperStrand	14	1	-12.5795
chr7	38354919	38354935	protein_coding	Zfp536	exon	ENSMUSG00000043456	NonProperStrand	236	chr14	52829462	52829570	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-5.4969
chr8	113447146	113447174	protein_coding	St3gal2	intron	ENSMUSG00000031749	ProperStrand	206	chr12	110887828	110887893	snoRNA	ENSMUSG00000084549_SNORD113	.	ENSMUSG00000084549	ProperStrand	196	5	-inf
chr13	52742450	52742466	protein_coding	Syk	utr3	ENSMUSG00000021457	NonProperStrand	125	chr10	79755546	79755572	protein_coding	Rps15	exon	ENSMUSG00000063457	ProperStrand	119	1	-10.4645
chr5	138226998	138227015	protein_coding	Mepce	exon	ENSMUSG00000029726	ProperStrand	18	chr9	70257954	70258012	protein_coding	Ccnb2	exon	ENSMUSG00000032218	ProperStrand	54	1	-15.9655
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-4.1299
chr4	30958929	30959019	LINE	Lx6	L1	chr4Lx630958345	NonProperStrand	2	chr4	30321975	30322065	LTR	RLTR13D6	ERVK	chr4RLTR13D630321606	NonProperStrand	1	1	-inf
chr11	62416956	62417026	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	chr5	108336363	108336490	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	8	-2.7064
chr19	6051064	6051196	protein_coding	Syvn1	exon	ENSMUSG00000024807	ProperStrand	6	chr17	24857717	24857807	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-6.7526
chr4	76614453	76614470	protein_coding	Ptprd	intron	ENSMUSG00000028399	ProperStrand	198	chrX	160377262	160377280	protein_coding	Zrsr2	exon	ENSMUSG00000031370	ProperStrand	57	1	-11.0215
chr6	48546647	48546682	protein_coding	Repin1	exon	ENSMUSG00000052751	ProperStrand	4	chr4	131908300	131908346	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-6.5415
chr11	75578860	75578937	protein_coding	Ywhae	utr3	ENSMUSG00000020849	ProperStrand	176	chr11	62418041	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	4	-11.6537
chr15	79908929	79909019	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	chr9	64143804	64143873	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-0.7969
chr7	29136537	29136586	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	chr10	127895516	127895570	tRNA	tRNA688-SerCGA	.	1068251	ProperStrand	71	1	-2.0857
chr17	39979942	39980003	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr17	25996060	25996076	protein_coding	Wdr90	exon	ENSMUSG00000073434	ProperStrand	91	1	-6.3978
chr4	116230385	116230401	protein_coding	Gpbp1l1	utr5	ENSMUSG00000034042	NonProperStrand	106	chr2	25206940	25206963	protein_coding	Man1b1	utr3	ENSMUSG00000036646	ProperStrand	57	1	-12.2733
chr5	120889875	120889892	protein_coding	Lhx5	intron	ENSMUSG00000029595	NonProperStrand	106	chr18	35716834	35716874	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.3004
chr11	116535915	116535980	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr6	30162058	30162074	protein_coding	Ube2h	utr3	ENSMUSG00000039159	ProperStrand	96	1	-4.9945
chr16	90777647	90777714	protein_coding	Urb1	exon	ENSMUSG00000039929	ProperStrand	71	chr4	131908803	131908893	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-6.3212
chr2	158451026	158451043	protein_coding	Actr5	exon	ENSMUSG00000037761	NonProperStrand	94	chr18	33954883	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-2.7005
chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	chr1	192712615	192712631	protein_coding	Rps6kc1	exon	ENSMUSG00000089872	ProperStrand	241	1	-8.9004
chr18	34763517	34764277	protein_coding	Brd8	exon	ENSMUSG00000003778	ProperStrand	27	chr11	77995237	77995255	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	3	-17.4932
chr17	45705948	45705996	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr19	25601154	25601171	protein_coding	Dmrt1	intron	ENSMUSG00000024837	ProperStrand	20	1	-8.9395
chr1	36883998	36884108	protein_coding	Tmem131	exon	ENSMUSG00000026116	ProperStrand	129	chr7	29136532	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.1929
chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	chr8	67197643	67197673	protein_coding	Sc4mol	utr3	ENSMUSG00000031604	ProperStrand	24	1	-12.3316
chr3	104607138	104607232	protein_coding	Mov10	exon	ENSMUSG00000002227	ProperStrand	96	chr4	53873613	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	1	-8.1049
chr1	133727368	133727416	protein_coding	Slc41a1	exon	ENSMUSG00000013275	ProperStrand	19	chr4	56910535	56910625	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-8.4127
chr11	95145382	95151149	protein_coding	Myst2	exon	ENSMUSG00000038909	ProperStrand	56	chr16	23110829	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-0.9026
chr15	100084806	100084835	protein_coding	Atf1	exon	ENSMUSG00000023027	ProperStrand	19	chr11	69481335	69481431	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.3947
chr1	35046366	35046446	LTR	RLTR28	ERVL	chr1RLTR2835046203	ProperStrand	1	chr19	46097633	46097723	SINE	B1_Mur4	Alu	chr19B1_Mur446097570	NonProperStrand	1	1	-inf
chr11	98556876	98556955	protein_coding	Psmd3	utr3	ENSMUSG00000017221	ProperStrand	51	chr15	79913287	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-3.8950
chr4	101137181	101137218	protein_coding	Ak4	utr3	ENSMUSG00000028527	ProperStrand	20	chr12	106269284	106269403	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	4	-18.7508
chr4	151734979	151734997	protein_coding	Chd5	exon	ENSMUSG00000005045	ProperStrand	51	chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	1	-10.9460
chr6	70794802	70794819	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chr14	79492437	79492453	protein_coding	1300010F03Rik	intron	ENSMUSG00000058997	ProperStrand	29	1	-12.8935
chr9	66296251	66296277	protein_coding	Herc1	exon	ENSMUSG00000038664	ProperStrand	81	chr11	5180669	5180685	protein_coding	Znrf3	utr3	ENSMUSG00000041961	NonProperStrand	210	1	-10.1977
chr11	6520321	6520411	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	chr4	56910531	56910611	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-1.1622
chr14	100237644	100237734	LINE	L1M4c	L1	chr14L1M4c100236504	ProperStrand	1	chr14	100237768	100237858	LTR	RLTR25A	ERVK	chr14RLTR25A100237738	NonProperStrand	1	1	-inf
chr1	134887011	134888261	protein_coding	Mdm4	utr3	ENSMUSG00000054387	ProperStrand	95	chr7	150717368	150717429	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	2	-7.6578
chr4	135093664	135093680	protein_coding	4930555I21Rik	utr3	ENSMUSG00000028801	ProperStrand	3	chr3	123210886	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-8.0648
chr13	114113333	114113350	protein_coding	BC067074	exon	ENSMUSG00000021763	NonProperStrand	62	chr1	87983863	87983952	snoRNA	ENSMUSG00000077274_SNORA26	.	ENSMUSG00000077274	ProperStrand	361	1	-9.6524
chr11	51931546	51931578	protein_coding	Ppp2ca	exon	ENSMUSG00000020349	ProperStrand	22	chr1	162967117	162967178	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	2	-16.8878
chr15	99461641	99462594	protein_coding	Racgap1	exon	ENSMUSG00000023015	ProperStrand	47	chr9	120038468	120038493	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.4829
chr3	87729086	87729125	protein_coding	Rrnad1	exon	ENSMUSG00000004896	ProperStrand	3	chr17	30772308	30772324	protein_coding	Dnahc8	utr5	ENSMUSG00000033826	ProperStrand	246	1	-16.8856
chr9	64831808	64831824	protein_coding	2010321M09Rik	exon	ENSMUSG00000034263	ProperStrand	4	chr19	8963028	8963128	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-7.6308
chr17	34089205	34089230	protein_coding	Rps18	exon	ENSMUSG00000008668	ProperStrand	111	chr5	136611800	136611816	protein_coding	Lrwd1	exon	ENSMUSG00000029703	NonProperStrand	51	1	-12.4062
chr11	83107840	83107902	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	chr15	79908932	79908960	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-1.4924
chr14	51427119	51427191	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr2	179322380	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	1	-5.1518
chr7	52632067	52632147	protein_coding	Snrnp70	exon	ENSMUSG00000063511	ProperStrand	61	chr3	123210893	123210983	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-3.6856
chr2	8759556	8759573	LINE	Lx	L1	chr2Lx8759488	ProperStrand	36	chr18	21054478	21054494	protein_coding	Trappc8	exon	ENSMUSG00000033382	ProperStrand	43	1	-15.0230
chr5	96694545	96694589	protein_coding	Mrpl1	utr3	ENSMUSG00000029486	ProperStrand	23	chr6	124909242	124909286	protein_coding	Cops7a	utr3	ENSMUSG00000030127	ProperStrand	16	1	-17.9842
chr5	115939521	115939618	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr4	131865410	131865517	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	10	-7.7858
chr5	53816825	53816848	LINE	L1MA6	L1	chr5L1MA653816681	NonProperStrand	1	chr4	131908356	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-inf
chr3	54564829	54564847	protein_coding	Smad9	intron	ENSMUSG00000027796	ProperStrand	24	chr11	106362640	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-9.2486
chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr13	96100639	96100695	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	1	-2.8348
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr7	109059924	109059982	protein_coding	2400001E08Rik	utr3	ENSMUSG00000030842	ProperStrand	18	1	-9.4558
chr7	138459653	138459669	protein_coding	Cuzd1	exon	ENSMUSG00000040205	NonProperStrand	59	chr5	121655126	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.7789
chr11	6519859	6519939	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	chr12	88778631	88778721	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-1.6032
chr18	64328476	64328492	antisense	1700091E21Rik	.	ENSMUSG00000086128	NonProperStrand	35	chr2	130102052	130102098	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-6.4188
chr14	27448185	27448212	protein_coding	Fam116a	exon	ENSMUSG00000040818	ProperStrand	23	chr7	116663665	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-7.1759
chr4	151730301	151730737	protein_coding	Chd5	exon	ENSMUSG00000005045	NonProperStrand	147	chr18	33954816	33954850	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-1.9539
chr1	130159530	130162962	protein_coding	Ubxn4	exon	ENSMUSG00000026353	ProperStrand	19	chr18	35716811	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.2504
chr19	8798462	8798555	lincRNA	Snhg1	exon	ENSMUSG00000090867	ProperStrand	100	chr9	120037898	120037933	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-3.7396
chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	chr7	117189864	117189925	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-2.6993
chr18	67657978	67658078	protein_coding	Spire1	intron	ENSMUSG00000024533	ProperStrand	14	chr17	35087894	35087920	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-8.1122
chr13	91601300	91601319	protein_coding	Ssbp2	intron	ENSMUSG00000003992	NonProperStrand	3	chr4	131865856	131865946	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.6896
chr14	67605299	67605358	protein_coding	Bnip3l	utr3	ENSMUSG00000022051	ProperStrand	30	chr4	124596914	124597573	protein_coding	Cdca8	utr3	ENSMUSG00000028873	ProperStrand	41	1	-15.5037
chr5	118376503	118376519	protein_coding	Nos1	exon	ENSMUSG00000029361	NonProperStrand	237	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-5.0382
chr11	78338409	78338426	protein_coding	Tnfaip1	utr3	ENSMUSG00000017615	ProperStrand	30	chr16	23111387	23111439	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.3326
chr4	131866240	131866292	lincRNA	Snhg12	exon	ENSMUSG00000086290	ProperStrand	178	chr2	130103751	130103803	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	5	-18.9188
chr8	26927767	26927784	protein_coding	Ash2l	utr3	ENSMUSG00000031575	ProperStrand	113	chr7	52381973	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-5.4675
chr8	61975527	61975607	LINE	L1_Mur1	L1	chr8L1_Mur161975536	ProperStrand	1	chr8	61975399	61975489	LINE	Lx4B	L1	chr8Lx4B61974982	ProperStrand	1	1	-inf
chr11	20548012	20548029	protein_coding	Sertad2	exon	ENSMUSG00000049800	ProperStrand	21	chr7	52382264	52382314	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-10.4051
chr10	62040933	62041033	protein_coding	2510003E04Rik	utr3	ENSMUSG00000036955	ProperStrand	8	chr10	23505152	23505220	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.7871
chr1	63628254	63628302	protein_coding	Adam23	intron	ENSMUSG00000025964	ProperStrand	59	chr19	8963034	8963124	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	8	-19.3552
chr16	8700237	8702086	protein_coding	Usp7	exon	ENSMUSG00000022710	ProperStrand	118	chr1	88247792	88247876	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-3.8095
chr17	4082107	4082180	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr8	10592076	10592093	protein_coding	Myo16	intron	ENSMUSG00000039057	NonProperStrand	45	1	-10.5446
chr15	38225669	38225700	protein_coding	Klf10	exon	ENSMUSG00000037465	ProperStrand	33	chr10	23505152	23505214	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-3.8666
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr1	10023349	10023366	protein_coding	Cops5	exon	ENSMUSG00000025917	ProperStrand	11	1	-11.2504
chr7	119934404	119934485	protein_coding	Tead1	intron	ENSMUSG00000055320	ProperStrand	217	chr4	131865380	131865457	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-1.7640
chr19	23140045	23140062	lincRNA	C330002G04Rik	intron	ENSMUSG00000087169	ProperStrand	34	chr17	35973181	35973583	protein_coding	Tubb5	exon	ENSMUSG00000001525	ProperStrand	624	1	-9.7712
chr9	42919320	42919361	protein_coding	Tmem136	utr3	ENSMUSG00000048503	ProperStrand	5	chr4	135846171	135846187	protein_coding	Zfp46	exon	ENSMUSG00000051351	NonProperStrand	85	1	-17.5699
chr2	79843543	79843559	protein_coding	Pde1a	intron	ENSMUSG00000059173	NonProperStrand	275	chr2	26493366	26493421	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-1.2186
chr8	11522109	11522190	protein_coding	Cars2	utr3	ENSMUSG00000056228	ProperStrand	17	chr16	23110550	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.8009
chr4	125724400	125724683	protein_coding	Mrps15	exon	ENSMUSG00000028861	ProperStrand	3	chr5	118376503	118376519	protein_coding	Nos1	exon	ENSMUSG00000029361	NonProperStrand	237	1	-16.9423
chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	chr19	9044349	9044390	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	1	-6.0145
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-4.0226
chr6	87709109	87709199	LINE	L1MCa	L1	chr6L1MCa87708623	NonProperStrand	1	chr16	32135689	32135769	LTR	RLTR17	ERVK	chr16RLTR1732135631	ProperStrand	2	1	-inf
chr6	131326079	131326154	protein_coding	Csda	exon	ENSMUSG00000030189	ProperStrand	86	chr10	23505152	23505219	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-0.7843
chr6	116334120	116334149	protein_coding	March8	intron	ENSMUSG00000025702	ProperStrand	6	chr16	23110454	23110514	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-6.9463
chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	chr11	77995189	77995257	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	2	-1.5551
chr16	23110828	23111003	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	chr13	23391990	23392065	tRNA	tRNA97-ValCAC	.	322950	ProperStrand	52	3	-1.8045
chr2	129998667	129998716	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr18	75783605	75783623	protein_coding	Ctif	intron	ENSMUSG00000052928	ProperStrand	41	1	-8.8736
chr19	8799829	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	chr12	60774058	60774109	snoRNA	ENSMUSG00000077603_SNORA3	.	ENSMUSG00000077603	ProperStrand	185	1	-2.8536
chr17	35299561	35299624	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	chr17	35384173	35384195	snoRNA	ENSMUSG00000065273_SNORD83	.	ENSMUSG00000065273	ProperStrand	244	3	-5.9851
chr2	75514987	75515072	protein_coding	Nfe2l2	exon	ENSMUSG00000015839	ProperStrand	24	chr2	71694477	71694531	protein_coding	Itga6	utr3	ENSMUSG00000027111	ProperStrand	54	4	-inf
chr12	3781716	3781768	protein_coding	Dtnb	utr3	ENSMUSG00000071454	ProperStrand	11	chr2	87802622	87802639	protein_coding	Olfr1157	exon	ENSMUSG00000075143	NonProperStrand	49	1	-17.2779
chr3	32820061	32820078	protein_coding	Usp13	intron	ENSMUSG00000056900	ProperStrand	15	chr11	106362637	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-10.2115
chr16	57549396	57549412	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr17	13115656	13115772	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	1	-2.3151
chr18	75161510	75161600	protein_coding	Rpl17	intron	ENSMUSG00000062328	ProperStrand	90	chr16	23111706	23111834	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-3.9247
chr12	113039591	113039653	protein_coding	Klc1	intron	ENSMUSG00000021288	ProperStrand	35	chr18	73693113	73693145	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-6.5886
chr1	34494309	34494389	protein_coding	Ccdc115	utr3	ENSMUSG00000042111	ProperStrand	7	chr18	35714170	35714260	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-7.7147
chr13	60314049	60314066	protein_coding	Gm5084	exon	ENSMUSG00000050765	ProperStrand	16	chr5	149862233	149862321	protein_coding	Hmgb1	utr5	ENSMUSG00000066551	ProperStrand	99	1	-15.0019
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr11	20991333	20991349	protein_coding	Peli1	utr5	ENSMUSG00000020134	ProperStrand	69	1	-11.0890
chr7	117189863	117189943	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr11	62416575	62416657	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	5	-1.5776
chr10	90579861	90579979	protein_coding	Slc25a3	exon	ENSMUSG00000061904	ProperStrand	74	chr17	66190340	66190420	protein_coding	Ppp4r1	utr3	ENSMUSG00000061950	ProperStrand	46	1	-13.4309
chr6	54173831	54173878	protein_coding	Chn2	intron	ENSMUSG00000004633	ProperStrand	12	chr9	108399281	108399458	protein_coding	Usp19	exon	ENSMUSG00000006676	ProperStrand	57	4	-19.4433
chr5	116063427	116063517	protein_coding	Gcn1l1	exon	ENSMUSG00000041638	ProperStrand	408	chr18	33954835	33954915	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-1.2811
chr13	113296767	113296840	protein_coding	Il6st	utr3	ENSMUSG00000021756	ProperStrand	34	chr5	31117163	31117181	protein_coding	Mapre3	utr5	ENSMUSG00000029166	NonProperStrand	19	1	-16.7300
chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	chr5	92483976	92484032	protein_coding	G3bp2	exon	ENSMUSG00000029405	ProperStrand	78	1	-8.9189
chr11	94511446	94511620	protein_coding	Eme1	exon	ENSMUSG00000039055	ProperStrand	1	chr5	108334195	108334260	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-inf
chr18	10151061	10151141	snRNA	ENSMUSG00000065941_U1	.	ENSMUSG00000065941	ProperStrand	47	chr15	79908929	79909019	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-5.9520
chr2	125565967	125566048	protein_coding	Secisbp2l	utr3	ENSMUSG00000035093	ProperStrand	26	chr4	131865462	131865506	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	3	-13.1470
chr5	109124122	109132306	protein_coding	Fgfrl1	exon	ENSMUSG00000008090	ProperStrand	111	chr9	40612827	40612896	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	1	-8.3125
chr13	101551670	101553447	protein_coding	Ccnb1	exon	ENSMUSG00000041431	ProperStrand	39	chr5	130300519	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-8.2806
chr9	53273140	53273230	protein_coding	Atm	exon	ENSMUSG00000034218	ProperStrand	17	chr4	131908729	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.3002
chr8	87117834	87117907	protein_coding	Cacna1a	intron	ENSMUSG00000034656	ProperStrand	35	chr18	35716840	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.1046
chrX	166423953	166424017	protein_coding	Mid1	exon	ENSMUSG00000035299	ProperStrand	209	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-5.2691
chr9	44196649	44196936	protein_coding	Hyou1	exon	ENSMUSG00000032115	ProperStrand	145	chr1	162966001	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-2.0612
chr11	68067261	68067277	protein_coding	Ntn1	intron	ENSMUSG00000020902	NonProperStrand	194	chr13	49779748	49779779	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-4.7189
chr6	34846258	34846314	protein_coding	Wdr91	exon	ENSMUSG00000058486	ProperStrand	15	chr10	23505152	23505237	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.5481
chrX	90718988	90719078	protein_coding	Pola1	intron	ENSMUSG00000006678	ProperStrand	83	chr6	148870756	148870842	protein_coding	Fam60a	utr3	ENSMUSG00000039985	ProperStrand	68	1	-12.4085
chr11	49966197	49966213	protein_coding	Tbc1d9b	exon	ENSMUSG00000036644	ProperStrand	27	chr16	23110841	23110867	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.1875
chr7	107249080	107249155	protein_coding	Pold3	exon	ENSMUSG00000030726	ProperStrand	14	chr10	23505176	23505266	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.6795
chr12	88225509	88225542	protein_coding	6430527G18Rik	utr5	ENSMUSG00000034168	ProperStrand	46	chr2	76398741	76398758	protein_coding	Osbpl6	intron	ENSMUSG00000042359	ProperStrand	19	1	-16.1901
chr6	100815107	100815130	protein_coding	Ppp4r2	exon	ENSMUSG00000052144	ProperStrand	7	chr16	23110977	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.4785
chr4	126533803	126533820	protein_coding	AU040320	intron	ENSMUSG00000028830	NonProperStrand	12	chr17	32194051	32194105	protein_coding	Rrp1b	exon	ENSMUSG00000058392	ProperStrand	38	1	-17.5081
chr12	111855901	111856644	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr4	131865385	131865483	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	2	-0.9575
chr16	57391576	57391674	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr6	71089798	71089843	protein_coding	Thnsl2	exon	ENSMUSG00000054474	NonProperStrand	3	1	-16.7351
chr18	80408324	80408426	protein_coding	Gm16286	exon	ENSMUSG00000024571	ProperStrand	15	chr16	23111390	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	7	-inf
chr18	65335325	65335353	protein_coding	Nedd4l	intron	ENSMUSG00000024589	ProperStrand	44	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-9.6029
chrX	101282058	101282101	protein_coding	C77370	exon	ENSMUSG00000046449	ProperStrand	10	chr17	24857719	24857809	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	3	-13.5687
chr4	131908357	131908465	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr14	63287575	63287611	snoRNA	ENSMUSG00000089531_SNORA73	.	ENSMUSG00000089531	ProperStrand	123	1	-5.8417
chr2	60772177	60772195	protein_coding	Rbms1	intron	ENSMUSG00000026970	ProperStrand	26	chr11	115941871	115941934	protein_coding	Wbp2	exon	ENSMUSG00000034341	ProperStrand	39	6	-19.1361
chr11	98878344	98878464	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	chr3	123210853	123210985	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	29	-3.3259
chr3	129339305	129339342	protein_coding	Elovl6	utr3	ENSMUSG00000041220	ProperStrand	59	chr9	120038635	120038672	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.0692
chr2	24696218	24696265	protein_coding	Ehmt1	exon	ENSMUSG00000036893	ProperStrand	45	chr11	35380172	35380189	protein_coding	Slit3	intron	ENSMUSG00000056427	ProperStrand	61	1	-13.8587
chr17	28465922	28465961	protein_coding	Rpl10a	exon	ENSMUSG00000037805	ProperStrand	121	chr16	23110454	23110526	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-4.0581
chr6	131330290	131330390	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	ProperStrand	408	chr10	23505550	23505621	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-3.8282
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr4	122968619	122968719	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-1.3363
chr2	91351885	91351932	protein_coding	Lrp4	utr3	ENSMUSG00000027253	ProperStrand	16	chr16	23111754	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-14.1016
chr5	145016776	145024972	protein_coding	Bri3	exon	ENSMUSG00000047843	ProperStrand	16	chr11	77995188	77995242	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-8.8417
chr5	108336377	108336413	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	chr2	166889030	166889057	snoRNA	ENSMUSG00000077515_SNORD12	.	ENSMUSG00000077515	ProperStrand	191	1	-2.7379
chr10	127522521	127522621	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr15	5068432	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-1.8233
chr19	55856453	55856471	protein_coding	Tcf7l2	intron	ENSMUSG00000024985	ProperStrand	103	chr16	56035948	56036001	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	1	-7.8652
chr6	24684480	24684497	protein_coding	Hyal6	exon	ENSMUSG00000029679	NonProperStrand	114	chr5	121655016	121655097	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.5937
chr3	35796756	35815145	protein_coding	Dcun1d1	exon	ENSMUSG00000027708	ProperStrand	14	chr11	51551279	51551336	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	3	-inf
chr13	35418315	35418332	DNA	Charlie7	MER1_type	chr13Charlie735418194	NonProperStrand	4	chr17	48588379	48588433	protein_coding	Tspo2	exon	ENSMUSG00000023995	ProperStrand	1	1	-inf
chr9	88419023	88419041	SINE	B4	B4	chr9B488418988	ProperStrand	75	chr11	6428060	6428088	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.7944
chr6	148303990	148304028	protein_coding	Rps4y2	utr3	ENSMUSG00000063171	ProperStrand	47	chr2	22444579	22444636	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	2	-13.1795
chr16	35567149	35567239	protein_coding	Sema5b	intron	ENSMUSG00000052133	ProperStrand	9	chr16	23110914	23110994	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.9939
chr11	98114979	98115021	protein_coding	Cdk12	intron	ENSMUSG00000003119	ProperStrand	50	chr11	69481372	69481462	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.5340
mmu-miR-690	0	21	miRNA	mmu-miR-690	.	mmu-miR-690	ProperStrand	63	chr19	8798742	8798810	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-4.7072
chr15	97584254	97584270	protein_coding	Rapgef3	exon	ENSMUSG00000022469	ProperStrand	19	chr9	59525921	59525951	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	3	-inf
chr7	144099135	144099225	protein_coding	Mgmt	intron	ENSMUSG00000054612	ProperStrand	14	chr7	116663633	116663723	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-5.2435
chr12	118780312	118780394	protein_coding	Rapgef5	intron	ENSMUSG00000041992	ProperStrand	14	chr16	23110952	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.2008
chr5	122091719	122091770	protein_coding	Acad10	intron	ENSMUSG00000029456	ProperStrand	60	chr2	26766809	26766854	snoRNA	ENSMUSG00000065258_SNORD24	.	ENSMUSG00000065258	ProperStrand	130	1	-11.7611
chr11	87862837	87862937	protein_coding	Srsf1	utr3	ENSMUSG00000018379	ProperStrand	49	chr3	123210855	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	12	-inf
chr10	80291548	80291578	miRNA	Mir1982	.	ENSMUSG00000087993	ProperStrand	1	chr3	95489387	95491772	protein_coding	Adamtsl4	utr5	ENSMUSG00000015850	ProperStrand	2	1	-inf
chr8	37280504	37280525	protein_coding	Lonrf1	exon	ENSMUSG00000039633	ProperStrand	13	chr18	33954827	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	5	-20.7097
chr2	121934076	121934176	protein_coding	Spg11	exon	ENSMUSG00000033396	ProperStrand	32	chr4	108011433	108011452	protein_coding	2010305A19Rik	utr3	ENSMUSG00000048351	ProperStrand	8	1	-18.1347
chr8	13417151	13417241	protein_coding	Grk1	utr3	ENSMUSG00000031450	NonProperStrand	12	chr17	35521397	35521487	protein_coding	H2-Q4	utr3	ENSMUSG00000035929	ProperStrand	3	1	-inf
chr16	23111372	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	chr16	38158092	38158227	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	14	-2.0256
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr2	160721184	160721200	protein_coding	Lpin3	exon	ENSMUSG00000027412	ProperStrand	31	1	-10.0465
chr18	10052132	10052153	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr3	52388277	52388294	SINE	B4A	B4	chr3B4A52388218	ProperStrand	169	1	-6.7402
chr9	50691156	50691172	protein_coding	Ppp2r1b	intron	ENSMUSG00000032058	NonProperStrand	5	chr17	35089181	35089217	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-10.6035
chr6	83720891	83720991	protein_coding	Tex261	utr3	ENSMUSG00000014748	ProperStrand	13	chr1	88247743	88247778	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-8.1588
chr16	33280766	33284521	protein_coding	Snx4	exon	ENSMUSG00000022808	ProperStrand	25	chr1	89681249	89681349	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-7.1784
chr5	97516227	97516317	protein_coding	Paqr3	utr3	ENSMUSG00000055725	ProperStrand	10	chr18	35716789	35716869	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-5.5279
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr2	29922365	29922412	protein_coding	Set	exon	ENSMUSG00000054766	ProperStrand	167	1	-5.0203
chr19	32464273	32464289	lincRNA	2700046G09Rik	exon	ENSMUSG00000024893	ProperStrand	59	chr7	119823122	119823163	protein_coding	Tead1	utr5	ENSMUSG00000055320	ProperStrand	217	1	-10.7690
chr4	108365979	108366021	protein_coding	Zfyve9	exon	ENSMUSG00000034557	ProperStrand	14	chr8	129468746	129468846	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-7.2976
chr1	75133361	75133434	protein_coding	1810031K17Rik	exon	ENSMUSG00000033159	ProperStrand	24	chr1	74410963	74411124	protein_coding	Gm216	exon	ENSMUSG00000073650	ProperStrand	33	1	-16.3564
chr11	69266813	69266830	protein_coding	Dnahc2	exon	ENSMUSG00000005237	ProperStrand	95	chr6	87963691	87995161	protein_coding	Rab7	utr5	ENSMUSG00000079477	ProperStrand	33	1	-13.5958
chr3	36878731	36878841	protein_coding	4932438A13Rik	intron	ENSMUSG00000037270	ProperStrand	96	chr7	118219574	118219612	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	5	-14.1796
chr4	43505651	43505783	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr2	32781400	32781417	protein_coding	Lrsam1	utr3	ENSMUSG00000026792	ProperStrand	80	1	-2.5645
chr13	105154046	105154064	protein_coding	Adamts6	intron	ENSMUSG00000046169	ProperStrand	3	chr7	16573686	16573738	protein_coding	Gltscr1	exon	ENSMUSG00000070808	ProperStrand	17	1	-inf
chr2	165108353	165108426	protein_coding	Slc35c2	exon	ENSMUSG00000017664	ProperStrand	39	chr16	23110979	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.7347
chr7	150875599	150875680	protein_coding	Osbpl5	utr3	ENSMUSG00000037606	ProperStrand	5	chr2	26768369	26768433	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	2	-17.1247
chr7	152050445	152050508	protein_coding	Fgf4	utr3	ENSMUSG00000050917	ProperStrand	66	chr8	73419683	73419773	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	4	-10.2701
chr10	49845171	49845188	LINE	L1VL4	L1	chr10L1VL449844774	NonProperStrand	17	chr11	84722945	84722961	protein_coding	Myo19	exon	ENSMUSG00000020527	ProperStrand	82	1	-15.2443
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr7	52381719	52381759	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	2	-4.3972
chr11	119207004	119207020	protein_coding	Sgsh	utr3	ENSMUSG00000005043	ProperStrand	67	chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-7.5194
chr7	151765212	151765228	antisense	Gm10574	.	ENSMUSG00000073778	ProperStrand	357	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	2	-7.0991
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr15	88977274	88977290	protein_coding	Mapk11	intron	ENSMUSG00000053137	NonProperStrand	29	1	-11.8982
chr5	25196906	25197006	protein_coding	Xrcc2	utr3	ENSMUSG00000028933	ProperStrand	8	chr8	32260335	32260411	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-8.6916
chr4	116826560	116826591	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	chr2	130102057	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-2.6176
chr4	151660827	151660843	protein_coding	Hes3	utr3	ENSMUSG00000028946	ProperStrand	3	chr5	121655027	121655127	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-9.9796
chr5	147645791	147645827	protein_coding	Rpl21	exon	ENSMUSG00000041453	ProperStrand	112	chr11	83107870	83107903	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	1	-7.5899
chr8	74446729	74446745	protein_coding	Zfp617	intron	ENSMUSG00000066880	NonProperStrand	208	chr10	127521221	127521271	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	1	-6.3245
chr12	110888922	110888948	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr6	88440604	88440704	protein_coding	Ruvbl1	intron	ENSMUSG00000030079	ProperStrand	24	1	-10.5172
chr7	127801517	127801533	protein_coding	Uqcrc2	intron	ENSMUSG00000030884	NonProperStrand	3	chr6	57638553	57638569	protein_coding	Pigy	utr3	ENSMUSG00000043162	NonProperStrand	18	1	-22.0931
chr6	113633029	113633129	protein_coding	Irak2	intron	ENSMUSG00000060477	ProperStrand	6	chr11	51551381	51551423	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	3	-20.2079
chr1	133252344	133252384	protein_coding	Srgap2	intron	ENSMUSG00000026425	ProperStrand	299	chr9	43614664	43614727	protein_coding	Pvrl1	utr3	ENSMUSG00000032012	ProperStrand	45	2	-16.8180
chr15	79585216	79585232	lincRNA	Gm16576	exon	ENSMUSG00000087543	NonProperStrand	55	chr15	79908929	79908956	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-5.6429
chr12	70260278	70260373	misc_RNA	AC099934.1	.	ENSMUSG00000092665	ProperStrand	45	chr15	79908954	79908992	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-6.0378
chr7	151765212	151765228	antisense	Gm10574	.	ENSMUSG00000073778	ProperStrand	357	chr14	35124429	35124457	protein_coding	Glud1	exon	ENSMUSG00000021794	ProperStrand	72	1	-9.3745
chr5	57637398	57637416	LINE	L1Md_F2	L1	chr5L1Md_F257636518	NonProperStrand	1	chr9	65044387	65044473	snRNA	ENSMUSG00000075763_U5	.	ENSMUSG00000075763	NonProperStrand	1	1	-inf
chr11	120148960	120148976	protein_coding	Bahcc1	exon	ENSMUSG00000039741	NonProperStrand	268	chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	1	-8.4392
chr3	88603815	88603866	pseudogene	5830417I10Rik	.	ENSMUSG00000078684	ProperStrand	68	chr3	68889030	68889130	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-3.0313
chr10	68578218	68578237	LTR	MT2A	ERVL	chr10MT2A68577899	ProperStrand	21	chr10	62228325	62228382	snoRNA	ENSMUSG00000080469_Snord98	.	ENSMUSG00000080469	ProperStrand	124	1	-13.9858
chr11	69487121	69487559	protein_coding	Senp3	exon	ENSMUSG00000005204	ProperStrand	65	chr9	108431244	108435938	protein_coding	Qrich1	exon	ENSMUSG00000006673	ProperStrand	30	1	-14.5604
chr7	133940875	133940930	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	chr17	35089181	35089233	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	4	-5.0859
chr12	88769535	88769571	protein_coding	Alkbh1	utr3	ENSMUSG00000079036	ProperStrand	70	chr3	88497863	88497980	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	11	-inf
chr15	12280168	12280245	protein_coding	Golph3	utr3	ENSMUSG00000022200	ProperStrand	35	chr11	62416623	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	4	-18.9250
chr7	51655010	51655100	protein_coding	Syt3	utr3	ENSMUSG00000030731	ProperStrand	3	chr16	23110455	23110526	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-14.4518
chr2	179771111	179771164	protein_coding	Psma7	utr3	ENSMUSG00000027566	ProperStrand	45	chr1	155272659	155272676	protein_coding	1700012A16Rik	exon	ENSMUSG00000042708	ProperStrand	523	1	-9.5576
chr13	60841456	60841481	protein_coding	Dapk1	exon	ENSMUSG00000021559	ProperStrand	109	chr11	6428035	6428119	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-3.8648
chr1	74000037	74000117	protein_coding	Tns1	utr5	ENSMUSG00000055322	ProperStrand	63	chr11	6428075	6428165	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.1043
chr12	109448231	109448283	protein_coding	Ccdc85c	intron	ENSMUSG00000084883	ProperStrand	157	chr1	89673596	89673686	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-1.6456
chr15	82173136	82173160	rRNA	n-R5s41	.	ENSMUSG00000064959	ProperStrand	4	chr11	6428035	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	4	-inf
chr18	10052133	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr9	95945047	95945063	protein_coding	Xrn1	intron	ENSMUSG00000032410	ProperStrand	12	1	-12.0801
chr12	81440111	81440136	protein_coding	Dcaf5	exon	ENSMUSG00000049106	ProperStrand	23	chr11	97641491	97641581	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	3	-19.0911
chr15	83173509	83173559	protein_coding	Arfgap3	exon	ENSMUSG00000054277	ProperStrand	6	chr8	32260335	32260421	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-9.3125
chr1	193916097	193916114	protein_coding	Traf5	intron	ENSMUSG00000026637	ProperStrand	13	chr7	116663633	116663759	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-5.3924
chr7	29136107	29137561	protein_coding	Rps16	exon	ENSMUSG00000037563	ProperStrand	191	chr7	116664807	116664899	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-1.6984
chr16	10088452	10088469	LTR	RMER10B	ERVL	chr16RMER10B10088331	NonProperStrand	14	chr9	15119631	15119686	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.3767
chr15	82980097	82980225	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr15	98350146	98350252	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	5	-2.4347
chr2	24205199	24205215	protein_coding	Il1rn	utr3	ENSMUSG00000026981	ProperStrand	45	chr18	35716697	35716802	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-4.6662
chr17	39985500	39985759	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr19	8798506	8798553	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	6	-1.8236
chr2	90235299	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr15	57807534	57807563	tRNA	tRNA913-MetCAT	.	1472857	ProperStrand	48	1	-4.8919
chr11	108749945	108750017	SINE	B2_Mm2	B2	chr11B2_Mm2108749867	ProperStrand	4	chr16	23110911	23111001	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-inf
chr11	45938576	45950923	protein_coding	Adam19	exon	ENSMUSG00000011256	ProperStrand	134	chr9	120037969	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	2	-5.4921
chr15	76734785	76735008	protein_coding	Rpl8	exon	ENSMUSG00000003970	ProperStrand	191	chr3	123210854	123210923	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	4	-3.0288
chr2	179305607	179305697	protein_coding	Cdh4	intron	ENSMUSG00000000305	NonProperStrand	10	chr6	28368217	28368297	protein_coding	Gcc1	exon	ENSMUSG00000029708	ProperStrand	5	1	-19.5370
chr7	97605640	97605656	protein_coding	Tmem126a	utr5	ENSMUSG00000030615	ProperStrand	22	chr10	23505221	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.8416
chr7	151631709	151631793	protein_coding-noncoding	Cttn	utr3	ENSMUSG00000031078	ProperStrand	4	chr5	145513313	145516112	protein_coding	Tmem130	exon	ENSMUSG00000043388	ProperStrand	26	3	-19.3730
chrX	130496426	130496668	protein_coding	Sytl4	exon	ENSMUSG00000031255	ProperStrand	169	chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-4.4414
chr3	87921180	87921196	protein_coding	Iqgap3	exon	ENSMUSG00000028068	ProperStrand	16	chr16	23110466	23110491	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.9207
chrX	9436981	9436998	LTR	MTE2a-int	MaLR	chrXMTE2a-int9436854	ProperStrand	7	chr5	74489215	74489326	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	1	-10.0042
chr19	8799052	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	chr11	6520321	6520421	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	2	-1.9419
chr18	35097503	35097534	protein_coding	Hspa9	utr3	ENSMUSG00000024359	ProperStrand	166	chr12	106269284	106269472	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	8	-18.9014
chr5	147645837	147646583	protein_coding	Rpl21	exon	ENSMUSG00000041453	ProperStrand	112	chr16	23111755	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.0093
chr13	96100624	96100714	protein_coding	Zbed3	intron	ENSMUSG00000041995	ProperStrand	33	chr15	98350174	98350254	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-5.9291
chr7	119748243	119748262	SINE	B4	B4	chr7B4119748188	ProperStrand	4	chr2	158182201	158182278	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-10.6141
chr15	79913288	79913354	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr10	112364755	112364846	protein_coding	Atxn7l3b	utr3	ENSMUSG00000074748	ProperStrand	18	1	-5.9221
chr17	46814084	46814100	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr8	13416895	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	2	-4.5687
chr11	94016891	94016933	lincRNA	B230206L02Rik	exon	ENSMUSG00000086003	ProperStrand	13	chr17	46822641	46822658	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	1	-12.3446
chr2	90235295	90235345	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	130160577	130160635	protein_coding	Nkain1	exon	ENSMUSG00000078532	ProperStrand	45	1	-5.0171
chr13	75905599	75905651	snoRNA	ENSMUSG00000077449_SNORA42	.	ENSMUSG00000077449	ProperStrand	26	chr3	108357358	108357458	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	2	-10.0608
chr19	5843866	5843956	non_coding	Neat1	.	ENSMUSG00000092274	ProperStrand	63	chr4	21797544	21798593	protein_coding	Sfrs18	exon	ENSMUSG00000028248	NonProperStrand	26	6	-19.6758
chr3	97009072	97011158	protein_coding	Bcl9	exon	ENSMUSG00000038256	ProperStrand	94	chr10	23505152	23505214	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	8	-9.8910
chr4	112929378	112929396	protein_coding	Skint6	intron	ENSMUSG00000087194	NonProperStrand	35	chr2	144091780	144091797	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	ProperStrand	549	1	-9.9681
chr7	105274780	105274835	protein_coding	Capn5	exon	ENSMUSG00000035547	ProperStrand	99	chr4	131865909	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.0559
chr4	134926614	134927796	protein_coding	A330049M08Rik	exon	ENSMUSG00000043924	ProperStrand	130	chr18	35716811	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.0298
chr7	142895833	142896032	protein_coding	Mki67	exon	ENSMUSG00000031004	ProperStrand	286	chr13	49779732	49779802	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-3.9846
chr5	19721265	19721281	protein_coding	Magi2	exon	ENSMUSG00000040003	ProperStrand	49	chr1	162965980	162965998	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-3.9815
chr13	107697794	107697884	protein_coding	Ipo11	intron	ENSMUSG00000042590	ProperStrand	120	chr19	8799357	8799403	snoRNA	ENSMUSG00000065280_SNORD28	.	ENSMUSG00000065280	ProperStrand	269	8	-19.6310
chr19	23334136	23334158	protein_coding	Smc5	exon	ENSMUSG00000024943	ProperStrand	146	chr7	29136588	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-2.0311
chr2	122509147	122509163	protein_coding	Slc30a4	utr3	ENSMUSG00000005802	NonProperStrand	1	chr11	6428060	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-inf
chr1	135439572	135439594	LTR	MTEb	MaLR	chr1MTEb135439379	NonProperStrand	1	chr11	119207004	119207020	protein_coding	Sgsh	utr3	ENSMUSG00000005043	ProperStrand	67	1	-inf
chr16	4039189	4039206	protein_coding	Dnase1	exon	ENSMUSG00000005980	NonProperStrand	17	chr2	153491654	153491713	protein_coding	Dnmt3b	exon	ENSMUSG00000027478	ProperStrand	19	1	-18.1299
chr8	13417142	13417232	protein_coding	Grk1	utr3	ENSMUSG00000031450	NonProperStrand	12	chr7	54441835	54441925	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-13.0126
chr2	147009105	147009122	protein_coding	Nkx2-2	utr3	ENSMUSG00000027434	NonProperStrand	84	chr9	21602970	21602986	protein_coding	Kank2	utr5	ENSMUSG00000032194	ProperStrand	196	1	-10.2628
chr7	150885176	150885192	protein_coding	Osbpl5	exon	ENSMUSG00000037606	NonProperStrand	7	chr11	106362638	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-11.8178
chr14	57029141	57029233	protein_coding	Rnf17	intron	ENSMUSG00000000365	ProperStrand	16	chr10	23505201	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-5.9181
chr3	95749922	95750012	protein_coding	Anp32e	utr3	ENSMUSG00000015749	ProperStrand	25	chr9	59519869	59523432	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	1	-8.9380
chr3	136497082	136497102	protein_coding	Ppp3ca	intron	ENSMUSG00000028161	ProperStrand	45	chr5	74489596	74489677	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	2	-7.2239
chr18	34516805	34532063	protein_coding	Reep5	exon	ENSMUSG00000005873	ProperStrand	19	chr4	45477411	45477428	protein_coding	Shb	intron	ENSMUSG00000044813	ProperStrand	32	1	-16.8781
chr14	124353869	124353886	protein_coding	Itgbl1	exon	ENSMUSG00000032925	ProperStrand	159	chr1	93320501	93320517	protein_coding	Per2	exon	ENSMUSG00000055866	NonProperStrand	44	1	-11.9835
chr6	124810680	124810696	protein_coding	Gpr162	exon	ENSMUSG00000038390	NonProperStrand	40	chr16	23111372	23111391	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.8604
chr19	4037354	4037884	protein_coding	Gstp1	exon	ENSMUSG00000060803	ProperStrand	9	chr4	131865933	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.2544
chr3	89865686	89865719	protein_coding	4933434E20Rik	exon	ENSMUSG00000027942	ProperStrand	19	chr11	48616661	48616706	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	2	-18.1581
chr3	34153848	34153865	non_coding	Sox2ot	.	ENSMUSG00000090828	NonProperStrand	13	chr17	24367272	24367336	protein_coding	Ccnf	exon	ENSMUSG00000072082	ProperStrand	149	2	-inf
chr2	70499760	70499776	protein_coding	Gorasp2	exon	ENSMUSG00000014959	NonProperStrand	14	chr11	116938651	116938751	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-9.0930
chr1	4322198	4322288	LINE	L1_Mm	L1	chr1L1_Mm4322206	ProperStrand	1	chr1	4321952	4322042	LINE	L1_Mus1	L1	chr1L1_Mus14321505	NonProperStrand	1	1	-inf
chr1	155287314	155287355	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	chr5	23358027	23358098	snoRNA	ENSMUSG00000093321_Snord93	.	ENSMUSG00000093321	ProperStrand	218	1	-6.4148
chr11	115708487	115708556	protein_coding	Llgl2	exon	ENSMUSG00000020782	ProperStrand	62	chr19	61301109	61301234	protein_coding	Csf2ra	exon	ENSMUSG00000059326	ProperStrand	17	1	-15.8097
chr11	54470940	54470956	protein_coding	Rapgef6	exon	ENSMUSG00000037533	NonProperStrand	8	chr8	73419657	73419740	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-16.5452
chr8	87494357	87494380	protein_coding	Prdx2	exon	ENSMUSG00000005161	ProperStrand	20	chrX	103397810	103397878	protein_coding	Pgk1	exon	ENSMUSG00000062070	ProperStrand	484	1	-11.3584
chr16	79856428	79856446	LTR	MLT1A0	MaLR	chr16MLT1A079856374	ProperStrand	1	chr10	79322490	79322525	protein_coding	Ptbp1	intron	ENSMUSG00000006498	ProperStrand	129	1	-inf
chr6	38384214	38384231	protein_coding	Ubn2	exon	ENSMUSG00000038538	ProperStrand	86	chr19	8963104	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.6982
chr18	73693110	73693138	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr19	8799025	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	5	-1.5542
chr1	134465558	134465574	protein_coding	Nfasc	utr3	ENSMUSG00000026442	NonProperStrand	48	chr4	131865855	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.1244
chr15	76735080	76735106	protein_coding	Rpl8	exon	ENSMUSG00000003970	ProperStrand	191	chr15	7144870	7144960	protein_coding	Lifr	utr3	ENSMUSG00000054263	ProperStrand	64	1	-10.8604
chr17	35299505	35299641	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	chr5	108336363	108336490	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	9	-0.7146
chr7	34997986	34998086	protein_coding	Gpi1	intron	ENSMUSG00000036427	ProperStrand	288	chr1	182827671	182827739	protein_coding	Lefty2	exon	ENSMUSG00000066652	ProperStrand	48	1	-10.6188
chr10	100179041	100179131	LINE	Lx8	L1	chr10Lx8100178815	ProperStrand	1	chr10	100179213	100179303	LTR	MTB	MaLR	chr10MTB100179217	NonProperStrand	1	1	-inf
chr11	78150285	78150301	protein_coding	Pigs	exon	ENSMUSG00000041958	NonProperStrand	138	chr15	10400174	10400237	protein_coding	Dnajc21	utr5	ENSMUSG00000044224	ProperStrand	17	1	-14.2045
chr2	90235290	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	31098945	31098961	protein_coding	Alkbh6	exon	ENSMUSG00000042831	NonProperStrand	22	1	-6.4314
chr2	26493422	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr9	79915104	79915120	protein_coding	Senp6	utr5	ENSMUSG00000034252	ProperStrand	110	1	-5.0109
chr10	76177790	76178019	protein_coding	Col6a1	utr5	ENSMUSG00000001119	ProperStrand	13	chr4	116828379	116828453	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-11.4930
chr19	38144266	38144285	protein_coding	Cep55	exon	ENSMUSG00000024989	NonProperStrand	2	chr7	118219574	118219628	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-11.5289
chr18	35714268	35714292	lincRNA	Snhg4	intron	ENSMUSG00000090430	ProperStrand	270	chr17	35087925	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-2.4285
chr4	44995806	44995863	protein_coding	Grhpr	exon	ENSMUSG00000035637	ProperStrand	35	chr4	116827119	116827186	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-8.1186
chr11	60274312	60274824	protein_coding	Drg2	exon	ENSMUSG00000020537	ProperStrand	13	chr1	162965526	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-6.2408
chrX	72214248	72214264	protein_coding-noncoding	Gab3	utr3	ENSMUSG00000032750	ProperStrand	420	chr7	13516165	13516211	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	1	-4.8349
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr5	75593275	75593304	protein_coding	Pdgfra	utr3	ENSMUSG00000029231	ProperStrand	11	1	-12.0668
chr7	128124398	128124415	protein_coding	Cdr2	intron	ENSMUSG00000030878	NonProperStrand	1	chr2	155936976	155937054	protein_coding	Cpne1	intron	ENSMUSG00000074643	ProperStrand	10	1	-inf
chr2	29748581	29748655	protein_coding	Odf2	exon	ENSMUSG00000026790	NonProperStrand	6	chr11	6520339	6520429	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	NonProperStrand	6	1	-18.9143
chr13	79156737	79156817	LINE	L1Md_F	L1	chr13L1Md_F79154576	NonProperStrand	2	chr13	79156992	79157082	LINE	L1Md_F	L1	chr13L1Md_F79156844	NonProperStrand	1	1	-inf
chr15	5068568	5068628	protein_coding	Rpl37	exon	ENSMUSG00000041841	ProperStrand	69	chr4	131908265	131908355	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-2.3607
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr17	34249533	34249565	protein_coding	Brd2	exon	ENSMUSG00000024335	ProperStrand	69	1	-8.5106
chr9	4796009	4796029	protein_coding	Gria4	utr5	ENSMUSG00000025892	ProperStrand	20	chr10	80270177	80270230	protein_coding	Amh	exon	ENSMUSG00000035262	NonProperStrand	2	1	-inf
chr2	119209125	119256758	protein_coding	Ino80	intron	ENSMUSG00000034154	ProperStrand	54	chr16	23110909	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	8	-8.0179
chr7	72447993	72457600	protein_coding	Tjp1	exon	ENSMUSG00000030516	ProperStrand	78	chr10	23505150	23505258	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	8	-11.3989
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr11	7049530	7049587	protein_coding	Adcy1	exon	ENSMUSG00000020431	ProperStrand	183	1	-5.7690
chr5	138433598	138433688	SINE	B2_Mm2	B2	chr5B2_Mm2138433589	NonProperStrand	1	chr5	138433795	138433875	SINE	RSINE1	B4	chr5RSINE1138433794	NonProperStrand	1	1	-inf
chr3	88125512	88125602	protein_coding	Cct3	utr3	ENSMUSG00000001416	ProperStrand	82	chr7	148634702	148634782	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-3.4066
chr9	15110940	15110967	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	chr1	160887110	160887126	protein_coding	Pappa2	exon	ENSMUSG00000073530	ProperStrand	13	1	-12.8229
chr2	129998654	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr16	17210537	17210554	protein_coding	Rimbp3	exon	ENSMUSG00000071636	ProperStrand	67	1	-7.8888
chr1	40053934	40053951	protein_coding	Map4k4	exon	ENSMUSG00000026074	ProperStrand	348	chr8	32260335	32260423	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-1.5529
chr7	26594610	26596703	protein_coding	Cyp2s1	exon	ENSMUSG00000040703	ProperStrand	18	chr1	162968214	162968294	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-9.2426
chr12	113017225	113017286	protein_coding	Klc1	intron	ENSMUSG00000021288	ProperStrand	35	chr17	35087903	35087962	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-6.2600
chr12	77681715	77681731	protein_coding	Spnb1	utr3	ENSMUSG00000021061	NonProperStrand	37	chr7	87226911	87226983	protein_coding	Zfp710	exon	ENSMUSG00000048897	ProperStrand	229	1	-11.6033
chr6	71947315	71947405	SINE	B4	B4	chr6B471947253	NonProperStrand	1	chr6	71947127	71947217	SINE	RSINE1	B4	chr6RSINE171947147	ProperStrand	1	1	-inf
chr4	131908384	131908474	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr4	56910551	56910618	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	5	-5.6626
chr18	63951543	63953907	protein_coding	Wdr7	exon	ENSMUSG00000040560	ProperStrand	28	chr17	24858084	24858179	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	1	-11.1928
chr5	125599853	125599933	protein_coding	Ncor2	exon	ENSMUSG00000029478	ProperStrand	377	chr7	16524120	16524210	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	1	-6.0672
chr17	36000485	36000501	protein_coding	Nrm	exon	ENSMUSG00000059791	ProperStrand	253	chr9	120037933	120037984	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-2.1099
chr2	89368462	89368479	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	chrX	71517854	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-3.7064
chr1	13363513	13363593	protein_coding	Ncoa2	intron	ENSMUSG00000005886	NonProperStrand	9	chr3	48409747	48409837	protein_coding	1700018B24Rik	utr3	ENSMUSG00000037910	ProperStrand	1	1	-inf
chr1	187299525	187299615	LTR	MTC	MaLR	chr1MTC187299427	NonProperStrand	1	chr1	187299296	187299376	LTR	RMER5	ERV1	chr1RMER5187299092	ProperStrand	1	1	-inf
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr13	9636396	9636413	protein_coding	Dip2c	exon	ENSMUSG00000048264	NonProperStrand	51	1	-6.2240
chr5	36816044	36816060	protein_coding	Grpel1	utr3	ENSMUSG00000029198	NonProperStrand	1	chr11	6428108	6428156	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-inf
chr11	58803490	58803514	protein_coding	Trim11	utr3	ENSMUSG00000020455	ProperStrand	43	chr15	79913288	79913347	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-7.0679
chr10	61919418	61919473	protein_coding	Vps26a	utr3	ENSMUSG00000020078	ProperStrand	15	chr18	75161109	75161172	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	3	-20.5393
mmu-miR-3963	3	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr4	122970403	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-1.1372
chr17	35050665	35050681	protein_coding	Ehmt2	exon	ENSMUSG00000013787	NonProperStrand	5	chr4	131908236	131908297	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-6.0411
chr15	82980081	82980170	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr4	131865412	131865449	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	5	-1.1930
chr6	85409201	85417153	protein_coding	Cct7	exon	ENSMUSG00000030007	ProperStrand	173	chr4	131908236	131908410	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	9	-7.7112
chr4	106054900	106054983	protein_coding	Usp24	exon	ENSMUSG00000028514	ProperStrand	74	chr1	162966823	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-5.8461
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr19	6298116	6298172	protein_coding	Ehd1	exon	ENSMUSG00000024772	ProperStrand	30	1	-9.3690
chr15	36535280	36535565	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr2	91613185	91613203	protein_coding	Ambra1	exon	ENSMUSG00000040506	ProperStrand	65	1	-7.7229
chr19	8798484	8798553	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	chr10	107800766	107800854	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	2	-1.6532
chr8	25920545	25921169	protein_coding	Adam5	exon	ENSMUSG00000031554	ProperStrand	49	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	2	-11.2634
chr11	100444965	100445582	protein_coding	Dnajc7	exon	ENSMUSG00000014195	ProperStrand	49	chr15	34370556	34370646	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-3.9265
chr17	66689583	66689612	protein_coding	1110012J17Rik	intron	ENSMUSG00000052105	ProperStrand	60	chr6	13820663	13820680	protein_coding	2610001J05Rik	exon	ENSMUSG00000052419	NonProperStrand	13	1	-16.4107
chr7	17367416	17367506	protein_coding	Slc1a5	exon	ENSMUSG00000001918	ProperStrand	19	chr17	24857750	24857830	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.3961
chr11	115104844	115104861	protein_coding	Tmem104	exon	ENSMUSG00000045980	NonProperStrand	21	chr2	26494780	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.0955
chr5	30972135	30972155	protein_coding-noncoding	Cenpa	utr3	ENSMUSG00000029177	ProperStrand	2	chr13	93209562	93209578	protein_coding	Ankrd34b	exon	ENSMUSG00000045034	NonProperStrand	28	2	-inf
chr3	156224612	156224628	lincRNA	4930570G19Rik	exon	ENSMUSG00000085084	ProperStrand	326	chr1	132742959	132742975	protein_coding	Pigr	exon	ENSMUSG00000026417	NonProperStrand	48	1	-10.3711
chr14	35157874	35157940	protein_coding	Glud1	utr3	ENSMUSG00000021794	ProperStrand	72	chr7	118219574	118219609	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-3.8277
chr7	108021842	108021858	protein_coding	Arhgef17	utr3	ENSMUSG00000032875	NonProperStrand	8	chr15	98356818	98356913	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	1	-11.8825
chr4	145662572	145665918	protein_coding	Gm13247	exon	ENSMUSG00000056300	ProperStrand	10	chr5	130300458	130300548	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-5.9242
chr8	36529522	36529538	protein_coding	Eri1	utr3	ENSMUSG00000031527	NonProperStrand	97	chr5	147646410	147646477	snoRNA	ENSMUSG00000077185_SNORD102	.	ENSMUSG00000077185	ProperStrand	142	1	-10.6190
chr4	43526330	43526351	protein_coding	Car9	utr3	ENSMUSG00000028463	NonProperStrand	35	chr4	129305598	129305703	protein_coding	Txlna	utr3	ENSMUSG00000053841	ProperStrand	37	4	-20.7561
chr2	178217044	178217061	protein_coding	Cdh26	intron	ENSMUSG00000039155	NonProperStrand	77	chr2	32818802	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-4.9859
chr11	98865628	98867377	protein_coding	Top2a	exon	ENSMUSG00000020914	ProperStrand	324	chr4	149616268	149618172	protein_coding	Eno1	exon	ENSMUSG00000063524	ProperStrand	432	1	-6.0124
chr12	3968611	3968627	protein_coding	Efr3b	exon	ENSMUSG00000020658	ProperStrand	142	chr12	119116483	119116502	protein_coding	Cdca7l	utr3	ENSMUSG00000021175	ProperStrand	7	1	-16.0413
chr4	131908363	131908465	lincRNA	Gm17300	exon	ENSMUSG00000091021	ProperStrand	109	chr15	98350146	98350174	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	NonProperStrand	9	1	-15.9835
chr11	116535469	116535534	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr2	126675656	126675703	protein_coding	Trpm7	exon	ENSMUSG00000027365	ProperStrand	34	1	-7.0378
chr1	123458279	123458359	protein_coding	Ddx18	exon	ENSMUSG00000001674	ProperStrand	41	chr7	116663669	116663759	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-5.4861
chr1	40053934	40057553	protein_coding	Map4k4	exon	ENSMUSG00000026074	ProperStrand	348	chr11	6428034	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-1.2571
chr16	44745580	44745680	protein_coding	Gtpbp8	intron	ENSMUSG00000022668	ProperStrand	1	chr1	95647024	95647040	protein_coding	Thap4	exon	ENSMUSG00000026279	NonProperStrand	4	1	-inf
chr11	98856642	98857198	protein_coding	Top2a	exon	ENSMUSG00000020914	ProperStrand	324	chr12	113032822	113032839	protein_coding	Klc1	utr3	ENSMUSG00000021288	NonProperStrand	5	1	-15.0958
chr17	56444267	56444284	protein_coding	Uhrf1	intron	ENSMUSG00000001228	NonProperStrand	3	chr12	112779147	112779204	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-11.0699
chr11	6166631	6166667	protein_coding	Ddx56	exon	ENSMUSG00000004393	ProperStrand	21	chr9	15119631	15119717	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.5745
chr1	130071459	130071501	protein_coding	R3hdm1	intron	ENSMUSG00000056211	ProperStrand	43	chr10	23505152	23505194	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-3.1809
chr6	32538122	32538139	protein_coding	Plxna4	utr5	ENSMUSG00000029765	NonProperStrand	15	chr3	123210853	123210930	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-4.5915
chr4	32688938	32688955	protein_coding	Gja10	exon	ENSMUSG00000051056	ProperStrand	7	chr5	108336363	108336406	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-9.2393
chr2	52967396	52967460	protein_coding	Fmnl2	exon	ENSMUSG00000036053	ProperStrand	35	chr17	25996060	25996076	protein_coding	Wdr90	exon	ENSMUSG00000073434	ProperStrand	91	1	-13.5659
chr2	71247052	71272132	protein_coding	Hat1	exon	ENSMUSG00000027018	ProperStrand	53	chr16	23110828	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-0.9890
chr10	90432659	90432679	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	chr15	98350146	98350248	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	2	-4.1034
chrX	34337010	34337067	protein_coding	Slc25a5	exon	ENSMUSG00000016319	ProperStrand	55	chr7	117166723	117166813	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-4.9842
chr2	144116367	144116387	LTR	MLT2B2	ERVL	chr2MLT2B2144116217	NonProperStrand	17	chr3	123210854	123210983	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-7.3207
chr6	143429777	143429793	LINE	L1MA4	L1	chr6L1MA4143429728	ProperStrand	39	chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	1	-10.6254
chr11	63885336	63887052	protein_coding	Cox10	exon	ENSMUSG00000042148	NonProperStrand	187	chr8	32260337	32260425	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-2.5482
chr9	21606177	21606193	protein_coding	Dock6	exon	ENSMUSG00000032198	NonProperStrand	30	chr5	121655017	121655135	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	8	-inf
chr16	73237800	73237890	LTR	BGLII	ERVK	chr16BGLII73237601	ProperStrand	1	chr16	73238025	73238105	LTR	MTC	MaLR	chr16MTC73237997	NonProperStrand	1	1	-inf
chr7	133528131	133528167	protein_coding	Nfatc2ip	utr3	ENSMUSG00000030722	ProperStrand	26	chr9	64143771	64143808	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	2	-14.9906
chr7	17501594	17501656	protein_coding	Calm3	utr3	ENSMUSG00000019370	ProperStrand	28	chr5	138610581	138610671	protein_coding	Mcm7	exon	ENSMUSG00000029730	ProperStrand	258	4	-19.9601
chr2	115889965	115889981	protein_coding	Meis2	utr5	ENSMUSG00000027210	NonProperStrand	8	chr14	76247711	76247740	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-8.2107
chr3	157307142	157307158	protein_coding	Ptger3	utr3	ENSMUSG00000040016	ProperStrand	7	chr7	116663640	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-6.6732
chr8	82271618	82271647	protein_coding	Anapc10	intron	ENSMUSG00000036977	ProperStrand	11	chr11	68886944	68887032	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	5	-20.2064
chr2	57090809	57090827	protein_coding	Gpd2	utr5	ENSMUSG00000026827	ProperStrand	93	chr8	4286130	4286146	protein_coding	Elavl1	utr3	ENSMUSG00000040028	NonProperStrand	20	1	-14.6485
chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	chr2	144087412	144087463	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-3.6306
chr15	51803372	51803756	protein_coding	Rad21	exon	ENSMUSG00000022314	ProperStrand	85	chr11	97642952	97643010	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	4	-7.3398
chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	chr10	79756766	79756826	protein_coding	Rps15	utr3	ENSMUSG00000063457	ProperStrand	119	1	-7.2279
chr10	40079395	40079412	protein_coding	Cdk19	intron	ENSMUSG00000038481	ProperStrand	34	chr7	116663711	116663754	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.5282
chr13	64469229	64469247	protein_coding	Ctsl	exon	ENSMUSG00000021477	ProperStrand	44	chr18	60937530	60938088	protein_coding	Rps14	exon	ENSMUSG00000024608	ProperStrand	154	1	-12.0480
chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	chr3	88715213	88715230	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-3.5072
chr2	73166930	73166947	protein_coding	Scrn3	intron	ENSMUSG00000008226	NonProperStrand	22	chr8	73419683	73419759	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-5.0290
chr2	121049466	121053428	protein_coding	Trp53bp1	exon	ENSMUSG00000043909	ProperStrand	45	chr4	131908809	131908899	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.6382
chr7	120044586	120044686	protein_coding	Tead1	utr3	ENSMUSG00000055320	ProperStrand	217	chr18	74938044	74938100	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	ProperStrand	1022	1	-5.1195
chr2	163268043	163268061	protein_coding	Gdap1l1	intron	ENSMUSG00000017943	NonProperStrand	30	chr11	62418013	62418065	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-6.9303
chr8	108233712	108233729	protein_coding	4933405L10Rik	exon	ENSMUSG00000013158	ProperStrand	94	chr11	116533823	116533893	snoRNA	ENSMUSG00000065640_Snord1c	.	ENSMUSG00000065640	ProperStrand	373	2	-13.8915
chr2	90235285	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr13	49218439	49218455	protein_coding	Wnk2	intron	ENSMUSG00000037989	NonProperStrand	67	2	-7.1090
chr7	86376115	86376195	LTR	ORR1C2	MaLR	chr7ORR1C286375819	NonProperStrand	1	chr7	86376279	86376369	SINE	B4A	B4	chr7B4A86376208	ProperStrand	1	1	-inf
chr9	96999561	96999588	protein_coding	Slc25a36	intron	ENSMUSG00000032449	ProperStrand	159	chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	1	-6.8884
chr5	31223446	31223546	protein_coding	Emilin1	utr3	ENSMUSG00000029163	ProperStrand	2	chr16	23110971	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr7	151026374	151027108	protein_coding	Dhcr7	exon	ENSMUSG00000058454	ProperStrand	30	chr16	23110832	23110873	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0481
chr10	20080843	20080859	protein_coding	Fam54a	utr3	ENSMUSG00000019992	ProperStrand	232	chr15	82686971	82687034	protein_coding	Tcf20	exon	ENSMUSG00000041852	ProperStrand	658	1	-5.8435
chr3	86662983	86663001	protein_coding	Dclk2	intron	ENSMUSG00000028078	ProperStrand	50	chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-6.8159
chr11	55300902	55300973	protein_coding-noncoding	G3bp1	utr5	ENSMUSG00000018583	ProperStrand	1	chr1	89673594	89673684	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-inf
chrX	71040976	71041008	protein_coding	Pdzd4	exon	ENSMUSG00000002006	ProperStrand	20	chr4	131908356	131908456	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-8.3399
chr15	78268478	78268566	protein_coding	Kctd17	intron	ENSMUSG00000033287	ProperStrand	6	chr4	131865410	131865500	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	2	-14.0331
chr13	73643012	73643028	protein_coding	Lpcat1	exon	ENSMUSG00000021608	ProperStrand	42	chr5	74489598	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-4.4529
chr17	4082173	4082253	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr9	120039591	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-0.7523
chr13	21879637	21879744	protein_coding	Hist1h2bp	exon	ENSMUSG00000069308	ProperStrand	6	chr17	35089181	35089233	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-10.1991
chr2	181423810	181423826	protein_coding	Rgs19	utr3	ENSMUSG00000002458	NonProperStrand	10	chr7	52381556	52381851	protein_coding	Rpl13a	exon	ENSMUSG00000074129	ProperStrand	269	1	-13.9745
chr16	33430319	33430340	protein_coding	Zfp148	intron	ENSMUSG00000022811	NonProperStrand	15	chr16	23111773	23111808	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.3973
chr9	72317029	72317119	protein_coding	Tex9	intron	ENSMUSG00000032219	ProperStrand	3	chr3	40493349	40493439	protein_coding	Intu	intron	ENSMUSG00000060798	ProperStrand	4	1	-inf
chr9	107495241	107495295	protein_coding	Ifrd2	utr3	ENSMUSG00000010048	ProperStrand	8	chr1	173041620	173041649	tRNA	tRNA710-ValCAC	.	276188	ProperStrand	206	2	-19.5621
chr18	69668122	69668212	protein_coding	Tcf4	intron	ENSMUSG00000053477	ProperStrand	13	chr2	110550801	110550891	protein_coding	Ano3	intron	ENSMUSG00000074968	ProperStrand	10	1	-21.7531
chr15	74789576	74789652	protein_coding	Ly6e	utr3	ENSMUSG00000022587	ProperStrand	21	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-8.1411
chr7	87537416	87537436	protein_coding	Furin	exon	ENSMUSG00000030530	ProperStrand	22	chr11	97642952	97643058	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-7.2420
chr8	98395791	98395881	protein_coding	Got2	exon	ENSMUSG00000031672	ProperStrand	85	chr4	122970409	122970489	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-6.7230
chr9	15120971	15121071	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	chr10	6063958	6063977	protein_coding	Akap12	intron	ENSMUSG00000038587	ProperStrand	1008	6	-19.8428
chr7	3657517	3658338	protein_coding	Rps9	exon	ENSMUSG00000006333	ProperStrand	87	chr4	131908717	131908797	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.7636
chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	chr18	73693113	73693137	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-1.4776
chr6	122271929	122275484	protein_coding	Phc1	exon	ENSMUSG00000040669	ProperStrand	158	chr4	131908236	131908335	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	5	-3.2414
chr17	26782374	26782468	protein_coding	Ergic1	intron	ENSMUSG00000001576	ProperStrand	114	chr5	130295530	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-4.0201
chr15	76735333	76735394	protein_coding	Rpl8	exon	ENSMUSG00000003970	ProperStrand	191	chr1	33828651	33828669	protein_coding	Zfp451	intron	ENSMUSG00000042197	NonProperStrand	393	1	-7.2389
chr1	119537534	119537624	LINE	L1Md_T	L1	chr1L1Md_T119533323	ProperStrand	1	chr7	54443749	54443839	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-inf
chr16	91270625	91270641	protein_coding	Olig1	exon	ENSMUSG00000046160	NonProperStrand	32	chr16	23111732	23111821	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.9714
chr3	82870606	82870667	protein_coding	Plrg1	exon	ENSMUSG00000027998	ProperStrand	16	chr9	120038553	120038643	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.5625
chr19	42257349	42257449	protein_coding	Zfyve27	intron	ENSMUSG00000018820	ProperStrand	23	chr16	23111448	23111505	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-4.9111
chr12	112779238	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	chr5	147646731	147646782	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	3	-1.9562
chr16	13413858	13413874	protein_coding	Mkl2	utr3	ENSMUSG00000009569	NonProperStrand	6	chr1	162968212	162968235	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-11.5581
chr17	6232006	6232022	protein_coding	Tulp4	exon	ENSMUSG00000034377	NonProperStrand	265	chr17	35088971	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-3.0580
chr2	165876941	165893548	protein_coding	Ncoa3	exon	ENSMUSG00000027678	ProperStrand	58	chr16	23110906	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	8	-7.4710
chr17	24857340	24857511	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr8	129468750	129468830	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-1.2914
chr9	78023108	78023188	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr10	25204051	25204141	protein_coding	Epb4.1l2	utr5	ENSMUSG00000019978	ProperStrand	105	2	-7.9178
chr14	79700541	79700575	protein_coding	1190002H23Rik	exon	ENSMUSG00000022018	ProperStrand	1	chr4	131865859	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr6	125105751	125105841	protein_coding	Iffo1	intron	ENSMUSG00000038271	ProperStrand	4	chr5	108334247	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-10.4241
chr17	32269189	32295023	protein_coding	Notch3	exon	ENSMUSG00000038146	ProperStrand	181	chr15	79913287	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	6	-11.0786
chr8	125731536	125731552	protein_coding	Gm20388	intron	ENSMUSG00000092329	ProperStrand	295	chr3	108357258	108357283	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-1.7301
chr12	82046672	82046772	protein_coding	Srsf5	utr5	ENSMUSG00000021134	ProperStrand	68	chr1	162966827	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	3	-13.8345
chr5	136707645	136707662	protein_coding	Sh2b2	exon	ENSMUSG00000005057	NonProperStrand	101	chr4	18020485	18020501	protein_coding	Mmp16	exon	ENSMUSG00000028226	ProperStrand	55	1	-12.4429
chr4	116314468	116314517	protein_coding	Akr1a1	exon	ENSMUSG00000028692	ProperStrand	35	chr5	74489546	74489636	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-4.8045
chr3	22110072	22110123	protein_coding	Tbl1xr1	utr3	ENSMUSG00000027630	ProperStrand	44	chr2	158205302	158205405	snoRNA	ENSMUSG00000064585_SNORA71	.	ENSMUSG00000064585	ProperStrand	418	1	-10.0502
chr11	102267695	102267928	protein_coding	Slc25a39	exon	ENSMUSG00000018677	ProperStrand	35	chr1	63225663	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-7.7439
chr1	187181501	187181534	protein_coding	Bpnt1	utr3	ENSMUSG00000026617	ProperStrand	15	chr17	35299551	35299641	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-7.5341
chr11	83302514	83310789	protein_coding	Taf15	exon	ENSMUSG00000020680	ProperStrand	60	chrX	143918835	143918910	snoRNA	ENSMUSG00000084421_SNORA35	.	ENSMUSG00000084421	ProperStrand	293	1	-10.1349
chr17	35189822	35190031	protein_coding	Clic1	exon	ENSMUSG00000007041	ProperStrand	12	chr5	130300434	130300524	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-5.5517
chr11	70800375	70800391	protein_coding	Dhx33	utr3	ENSMUSG00000040620	NonProperStrand	14	chr9	120037992	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-7.6016
chr2	27001910	27002000	antisense	Gm13399	.	ENSMUSG00000085008	NonProperStrand	8	chr8	3946026	3946116	protein_coding	Cd209c	utr5	ENSMUSG00000040165	NonProperStrand	2	1	-26.0014
chr14	51427120	51427161	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr4	132530098	132530117	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	1	-3.6268
chr2	77772437	77772537	protein_coding	Cwc22	intron	ENSMUSG00000027014	ProperStrand	17	chr2	158182156	158182200	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-7.5108
chr9	108476626	108476705	protein_coding	Wdr6	exon	ENSMUSG00000066357	ProperStrand	30	chr11	62416625	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-10.5893
chr8	112576416	112576432	LINE	L1_Mus3	L1	chr8L1_Mus3112576213	ProperStrand	24	chr17	24856620	24856755	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-8.2622
chr15	99042741	99042831	protein_coding	Spats2	utr3	ENSMUSG00000051934	ProperStrand	71	chr4	131865902	131865982	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.5136
chr15	76722366	76722456	protein_coding	Zfp7	utr3	ENSMUSG00000033669	ProperStrand	15	chr6	97112844	97112924	snoRNA	ENSMUSG00000065728_SNORA36	.	ENSMUSG00000065728	ProperStrand	158	2	-19.6101
chr17	35379705	35379732	protein_coding	Ddx39b	utr5	ENSMUSG00000019432	ProperStrand	119	chr4	128295754	128295770	protein_coding	Tlr12	utr5	ENSMUSG00000062545	NonProperStrand	8	1	-16.0276
chr11	75439848	75439873	protein_coding	Pitpna	utr3	ENSMUSG00000017781	ProperStrand	12	chr15	84172736	84172752	protein_coding	Parvg	utr3	ENSMUSG00000022439	ProperStrand	3	1	-inf
chr4	153661080	153673487	protein_coding	Arhgef16	exon	ENSMUSG00000029032	ProperStrand	12	chr16	23110937	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-6.8317
chr4	134314964	134323806	protein_coding	Ldlrap1	exon	ENSMUSG00000037295	ProperStrand	18	chr3	88715215	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	2	-15.3115
chr14	23087554	23087571	protein_coding	1700112E06Rik	intron	ENSMUSG00000063458	ProperStrand	15	chr16	23110827	23110851	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.0842
chr12	87859856	87859956	protein_coding	Esrrb	exon	ENSMUSG00000021255	ProperStrand	254	chr11	62416606	62416633	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-4.3983
chr14	20961342	20961378	protein_coding	Kcnk5	exon	ENSMUSG00000023243	ProperStrand	29	chr16	23110970	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0921
chr8	124981916	124982006	protein_coding	Snai3	intron	ENSMUSG00000006587	ProperStrand	9	chr5	74489595	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-7.5428
chr2	91059033	91074269	protein_coding	Ddb2	exon	ENSMUSG00000002109	ProperStrand	8	chr11	101440258	101440274	protein_coding	Nbr1	intron	ENSMUSG00000017119	ProperStrand	91	1	-16.5231
chr4	139004846	139006289	protein_coding	Ubr4	exon	ENSMUSG00000066036	ProperStrand	304	chr5	130300509	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	5	-3.3629
chr11	88700988	88702495	protein_coding	Akap1	exon	ENSMUSG00000018428	ProperStrand	45	chr10	60562198	60562253	protein_coding	Sgpl1	utr3	ENSMUSG00000020097	ProperStrand	34	2	-19.0029
chr15	7109223	7109240	protein_coding	Lifr	intron	ENSMUSG00000054263	NonProperStrand	14	chr16	23110828	23110858	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.2008
chr2	145076804	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	chr12	17552949	17553040	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	5	-4.3207
chr5	137764080	137764303	protein_coding	Slc12a9	exon	ENSMUSG00000037344	ProperStrand	7	chr8	73419682	73419772	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-7.3719
chr14	48321393	48323931	protein_coding	Ktn1	exon	ENSMUSG00000021843	ProperStrand	64	chr18	73693166	73693188	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-5.3980
chr17	24666542	24666559	protein_coding	Rab26	exon	ENSMUSG00000079657	NonProperStrand	6	chr17	35088957	35089015	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-10.5918
chr14	66726159	66726872	protein_coding	Ephx2	exon	ENSMUSG00000022040	ProperStrand	6	chr4	148494139	148494157	protein_coding	Dffa	utr3	ENSMUSG00000028974	ProperStrand	55	1	-17.9747
chr11	69207137	69207161	protein_coding	Cyb5d1	utr3	ENSMUSG00000044795	ProperStrand	8	chr17	24856620	24856736	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	7	-20.7874
chr3	123210868	123210958	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	chr10	90644174	90644194	tRNA	tRNA857-TrpCCA	.	303618	ProperStrand	23	2	-6.4095
chrX	21257757	21257779	LINE	L1_Mur3	L1	chrXL1_Mur321256481	ProperStrand	9	chr7	117166731	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-8.6357
chr11	97413014	97413104	protein_coding	Srcin1	exon	ENSMUSG00000038453	ProperStrand	29	chr11	97642992	97643084	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	7	-inf
mmu-miR-92a-3p	0	21	miRNA	mmu-miR-92a-3p	.	mmu-miR-92a-3p	ProperStrand	7	chr7	25386859	25386877	protein_coding	Ethe1	intron	ENSMUSG00000064254	ProperStrand	4	1	-inf
chr8	72287172	72287188	protein_coding	Zfp866	utr3	ENSMUSG00000043090	NonProperStrand	134	chr11	69481386	69481476	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-3.3486
chr2	127370959	127371049	SINE	PB1	Alu	chr2PB1127370921	ProperStrand	1	chr8	3391832	3391912	SINE	ID_B1	B4	chr8ID_B13391780	ProperStrand	1	1	-inf
chr2	90235298	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	102076758	102076792	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	4	-5.1628
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr14	57204539	57204555	protein_coding	Parp4	exon	ENSMUSG00000054509	NonProperStrand	113	2	-5.6140
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr5	115940329	115940406	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	2	-4.6831
chr19	38736746	38736763	protein_coding	Plce1	intron	ENSMUSG00000024998	NonProperStrand	11	chr19	8963129	8963181	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.4574
chr5	23825941	23825957	protein_coding	Kcnh2	exon	ENSMUSG00000038319	ProperStrand	242	chrX	84483696	84483720	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-5.4938
chr16	20634598	20634683	protein_coding	Ece2	intron	ENSMUSG00000022842	ProperStrand	25	chr9	15119646	15119738	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	8	-21.5397
chr11	69448335	69462334	protein_coding	Fxr2	exon	ENSMUSG00000018765	ProperStrand	40	chr16	23110980	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.4886
chr4	116826569	116826955	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	chr15	34370574	34370664	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-1.1432
chr4	136110195	136110231	protein_coding	Kdm1a	exon	ENSMUSG00000036940	ProperStrand	83	chr11	69483136	69483229	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-3.4823
chr5	31376391	31376449	protein_coding	Cad	exon	ENSMUSG00000013629	ProperStrand	260	chr11	67167096	67167112	protein_coding	Myh13	exon	ENSMUSG00000060180	ProperStrand	145	1	-8.6066
chr5	34987364	35002712	protein_coding	Nop14	utr5	ENSMUSG00000036693	ProperStrand	35	chr16	23110909	23111010	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-4.3005
chr11	4820972	4820990	protein_coding	Thoc5	intron	ENSMUSG00000034274	ProperStrand	325	chr11	97641503	97641577	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	1	-4.5467
chr8	77742558	77742574	protein_coding	Rasd2	exon	ENSMUSG00000034472	NonProperStrand	237	chrX	84483699	84483749	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	2	-9.0390
chr17	35282326	35282363	protein_coding	Bag6	exon	ENSMUSG00000024392	ProperStrand	181	chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	1	-5.9231
chr3	54576462	54576480	protein_coding	Smad9	intron	ENSMUSG00000027796	ProperStrand	24	chr7	148634701	148634800	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-5.7622
chr7	37282244	37282334	SINE	ID4	ID	chr7ID437282240	ProperStrand	1	chr7	37282130	37282210	Satellite	ZP3AR	Satellite	chr7ZP3AR37281936	ProperStrand	1	1	-inf
chr8	122037781	122037821	protein_coding	Mbtps1	utr3	ENSMUSG00000031835	ProperStrand	81	chr11	121420101	121420191	protein_coding	Tbcd	intron	ENSMUSG00000039230	ProperStrand	34	1	-13.8569
chr4	140270438	140273544	protein_coding	Rcc2	exon	ENSMUSG00000040945	ProperStrand	228	chr4	131908688	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-1.4680
chr8	103289498	103289516	Simple_repeat	(CA)n	Simple_repeat	chr8(CA)n103289418	ProperStrand	10	chr4	131908689	131908710	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.3231
chr11	72840130	72840528	protein_coding	Camkk1	exon	ENSMUSG00000020785	ProperStrand	1	chr16	23110896	23110938	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr11	100414998	100415014	protein_coding	Ttc25	exon	ENSMUSG00000006784	NonProperStrand	119	chr13	51743567	51743588	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-5.5127
mmu-miR-5100	5	20	miRNA	mmu-miR-5100	.	mmu-miR-5100	ProperStrand	132	chr13	96100553	96100695	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	1	-6.5023
chr13	9833551	9833620	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr8	94190520	94190556	protein_coding	Fto	utr3	ENSMUSG00000055932	ProperStrand	34	1	-6.0677
chr4	134879868	134879905	protein_coding	Srrm1	exon	ENSMUSG00000028809	ProperStrand	142	chr12	110874223	110874290	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	1	-8.2539
chr13	9833551	9833695	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr15	82991259	82991277	protein_coding	Cyb5r3	exon	ENSMUSG00000018042	ProperStrand	22	1	-6.9384
chr18	53372438	53372506	protein_coding	Snx2	exon	ENSMUSG00000034484	ProperStrand	6	chr11	113730275	113731050	protein_coding	Sdk2	exon	ENSMUSG00000041592	NonProperStrand	98	1	-16.9225
chr2	90558399	90561351	protein_coding	Nup160	exon	ENSMUSG00000051329	ProperStrand	49	chr19	8800378	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-3.9069
chrX	72214248	72214264	protein_coding-noncoding	Gab3	utr3	ENSMUSG00000032750	ProperStrand	420	chr5	108334195	108334260	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-1.4242
chr1	187196920	187198070	protein_coding	Eprs	exon	ENSMUSG00000026615	ProperStrand	149	chr11	97642955	97643035	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.0865
chr18	80488007	80488024	protein_coding	Pqlc1	intron	ENSMUSG00000034006	NonProperStrand	6	chr5	65780786	65780835	protein_coding	Rpl9	exon	ENSMUSG00000047215	ProperStrand	113	1	-16.8242
chr14	22445455	22445497	protein_coding	Myst4	intron	ENSMUSG00000021767	ProperStrand	151	chr5	108334224	108334322	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-3.0965
chr4	68607688	68607705	protein_coding	Dbc1	intron	ENSMUSG00000028351	ProperStrand	78	chr9	15119967	15120012	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-6.7321
chr3	89540415	89540464	protein_coding	Adar	intron	ENSMUSG00000027951	ProperStrand	52	chr7	134671435	134671479	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	NonProperStrand	3	1	-inf
chr5	129669817	129669835	protein_coding	Gpr133	intron	ENSMUSG00000044017	NonProperStrand	4	chr16	23110828	23110873	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.6489
chr2	125157590	125157607	protein_coding	Fbn1	intron	ENSMUSG00000027204	NonProperStrand	32	chr7	52382236	52382314	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-9.5485
chr17	46680281	46680298	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr4	122968596	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-2.4621
chr8	59992169	59992211	protein_coding	Hmgb2	exon	ENSMUSG00000054717	ProperStrand	184	chr9	120039534	120039624	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.4566
chr9	62978692	62978724	SINE	B2_Mm2	B2	chr9B2_Mm262978678	ProperStrand	1	chr13	112540780	112541440	protein_coding	Map3k1	exon	ENSMUSG00000021754	ProperStrand	113	1	-inf
chr15	82005554	82032186	protein_coding	Srebf2	exon	ENSMUSG00000022463	ProperStrand	592	chr9	15119646	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	6	-1.9047
chr7	128035473	128035518	protein_coding	Eef2k	exon	ENSMUSG00000035064	ProperStrand	27	chr18	35716809	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.5820
chr16	30514154	30514171	protein_coding	Tmem44	utr3	ENSMUSG00000022537	ProperStrand	217	chr2	173513699	173513748	protein_coding	Rab22a	intron	ENSMUSG00000027519	ProperStrand	9	1	-14.6237
chr9	114346920	114347070	protein_coding	Glb1	exon	ENSMUSG00000045594	ProperStrand	67	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-1.9606
chr13	81033256	81033362	protein_coding	Arrdc3	utr3	ENSMUSG00000074794	ProperStrand	6	chr6	115757992	115758041	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-10.1855
chr1	175912828	175912845	protein_coding	Ifi202b	utr5	ENSMUSG00000026535	ProperStrand	1	chr2	26494763	26494842	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-inf
chr2	31924012	31924028	protein_coding	Fam78a	utr3	ENSMUSG00000050592	NonProperStrand	340	chr2	158203966	158204001	snoRNA	ENSMUSG00000065840_SNORA71	.	ENSMUSG00000065840	ProperStrand	107	1	-8.6790
chrX	20240135	20240195	protein_coding	Uba1	utr5	ENSMUSG00000001924	ProperStrand	156	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-7.0749
chr8	13416897	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr3	132554382	132554398	protein_coding	Npnt	exon	ENSMUSG00000040998	ProperStrand	14	1	-9.3927
chr3	58898417	58898435	protein_coding	Gm10071	intron	ENSMUSG00000059776	NonProperStrand	9	chr4	131908724	131908896	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-7.7011
chr14	35124101	35158047	protein_coding	Glud1	exon	ENSMUSG00000021794	ProperStrand	72	chr4	131908686	131908857	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-4.6278
chr2	170520528	170520545	Other	RMER1B	Other	chr2RMER1B170520441	ProperStrand	12	chr9	15119967	15119993	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-10.5219
chr16	23110840	23110889	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	chr17	71990218	71990297	snoRNA	ENSMUSG00000092887_Snord53	.	ENSMUSG00000092887	ProperStrand	53	4	-2.7196
chr1	95326800	95326873	protein_coding	Hdlbp	exon	ENSMUSG00000034088	ProperStrand	97	chr17	35087926	35087959	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-4.2775
chr7	132789228	132789275	protein_coding	Gtf3c1	exon	ENSMUSG00000032777	ProperStrand	161	chr18	35716832	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-0.7755
chr5	100855903	100855922	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr1	33833325	33833380	protein_coding	Zfp451	exon	ENSMUSG00000042197	ProperStrand	17	1	-9.1790
chr1	155320498	155320564	protein_coding	Dhx9	intron	ENSMUSG00000042699	ProperStrand	98	chr6	115758029	115758119	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-4.5240
chr8	100893946	100894026	SINE	B2_Mm2	B2	chr8B2_Mm2100893886	NonProperStrand	1	chr2	112173863	112173953	protein_coding	Slc12a6	intron	ENSMUSG00000027130	ProperStrand	35	1	-inf
chr5	54389948	54389965	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	chr4	86232356	86232474	snoRNA	ENSMUSG00000088958_Scarna8	.	ENSMUSG00000088958	ProperStrand	366	1	-7.1732
chrX	55527793	55527809	LINE	L1MA6	L1	chrXL1MA655527687	ProperStrand	6	chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-11.1899
chr17	46818738	46818812	protein_coding	Mea1	exon	ENSMUSG00000002768	ProperStrand	15	chr2	26768368	26768385	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	4	-19.3181
chr5	61309370	61309460	LINE	L1Md_F2	L1	chr5L1Md_F261308131	NonProperStrand	1	chr7	54442453	54442533	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	1	-inf
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr11	97642722	97642749	protein_coding	Rpl23	exon	ENSMUSG00000071415	ProperStrand	920	1	-1.9507
chr1	72206907	72207007	protein_coding	Mreg	utr3	ENSMUSG00000039395	ProperStrand	63	chr1	162965539	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.1878
chr2	150095904	150095920	protein_coding	Gm14124	utr3	ENSMUSG00000079008	NonProperStrand	18	chr18	35716811	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.3552
chr8	77742558	77742574	protein_coding	Rasd2	exon	ENSMUSG00000034472	NonProperStrand	237	chr1	88252836	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-3.9821
chr18	62675061	62675151	protein_coding	Fbxo38	exon	ENSMUSG00000042211	ProperStrand	18	chr10	110918552	110918632	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-5.7690
chr12	111932893	111933340	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr5	114224335	114224374	protein_coding	Iscu	exon	ENSMUSG00000025825	ProperStrand	15	1	-11.0730
chr10	71583223	71583303	LINE	L1Md_F2	L1	chr10L1Md_F271582494	NonProperStrand	1	chr10	71583390	71583480	LINE	L1Md_F2	L1	chr10L1Md_F271583333	ProperStrand	1	1	-inf
chr4	46499767	46499784	SINE	ID_B1	B4	chr4ID_B146499735	ProperStrand	33	chr7	118219622	118219648	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-5.3243
chr1	145971868	145971889	LINE	L2	L2	chr1L2145971861	NonProperStrand	49	chr1	174492230	174492246	protein_coding	Vsig8	exon	ENSMUSG00000049598	ProperStrand	27	1	-15.3485
chr7	134169531	134169615	protein_coding	Maz	utr5	ENSMUSG00000030678	ProperStrand	42	chr4	131908372	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-5.4734
chr14	118882710	118882730	protein_coding	Abcc4	utr3	ENSMUSG00000032849	ProperStrand	137	chr10	80644904	80644948	protein_coding	Eef2	utr3	ENSMUSG00000034994	ProperStrand	2244	2	-7.4697
chr7	29171541	29171558	protein_coding	Med29	utr3	ENSMUSG00000003444	NonProperStrand	134	chr11	62418014	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-4.0150
chr13	14089045	14089111	protein_coding	B3galnt2	intron	ENSMUSG00000039242	ProperStrand	6	chr12	92811866	92811925	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	1	-13.3266
chr8	109180152	109180227	protein_coding	Cdh1	intron	ENSMUSG00000000303	ProperStrand	283	chr19	8800375	8800465	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-1.0304
chr16	13811639	13811680	protein_coding	Rrn3	exon	ENSMUSG00000022682	ProperStrand	58	chr7	116663738	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-4.5219
chr7	117189971	117190062	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	chr4	56910495	56910630	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	20	-5.3603
chr17	35793596	35793695	protein_coding	Vars2	exon	ENSMUSG00000038838	ProperStrand	19	chr19	8799830	8799888	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-7.2272
mmu-miR-290a-5p	0	22	miRNA	mmu-miR-290a-5p	.	mmu-miR-290a-5p	ProperStrand	22	chr7	117189963	117190063	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	3	-12.4176
chr4	47040071	47040089	protein_coding	Anks6	exon	ENSMUSG00000066191	NonProperStrand	10	chr2	158185588	158185622	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	2	-16.1038
chrX	71589890	71589908	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr18	38116113	38116129	protein_coding	Rell2	exon	ENSMUSG00000044024	NonProperStrand	43	1	-10.8202
chr11	79286970	79289295	protein_coding	Nf1	exon	ENSMUSG00000020716	ProperStrand	42	chr18	39478948	39478965	protein_coding	Arhgap26	intron	ENSMUSG00000036452	NonProperStrand	29	1	-15.5200
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr17	23798806	23798822	protein_coding	Ccdc64b	exon	ENSMUSG00000043782	ProperStrand	9	1	-11.6738
chr10	7422801	7422865	protein_coding	Lats1	exon	ENSMUSG00000040021	ProperStrand	13	chr1	31260593	31260609	protein_coding	Lgsn	exon	ENSMUSG00000050217	ProperStrand	20	1	-18.7925
chr18	35716830	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	chr10	127522346	127522413	snoRNA	ENSMUSG00000093245_AC131120.1	.	ENSMUSG00000093245	ProperStrand	77	5	-9.1514
chr3	8545729	8554858	protein_coding	Stmn2	exon	ENSMUSG00000027500	ProperStrand	16	chr19	8799053	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-8.4852
chr16	75761550	75765200	protein_coding	Hspa13	exon	ENSMUSG00000032932	NonProperStrand	57	chr3	88497891	88497980	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	2	-12.1145
chr4	131481155	131481255	protein_coding	Epb4.1	utr3	ENSMUSG00000028906	ProperStrand	23	chr19	8798504	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	5	-19.3763
chr18	16967315	16967332	protein_coding	Cdh2	utr5	ENSMUSG00000024304	NonProperStrand	19	chr15	79908956	79908984	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-7.7665
chr13	50116846	50116932	LINE	L1Md_A	L1	chr13L1Md_A50110523	ProperStrand	3	chr19	12086454	12086495	tRNA	tRNA109-ValTAC	.	771220	ProperStrand	96	1	-18.7103
chr11	62416591	62416657	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	chr11	6428034	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	25	-2.4699
chr2	158182156	158182194	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	chr4	131866608	131866676	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	2	-2.5362
chr19	38007124	38007224	protein_coding	Myof	exon	ENSMUSG00000048612	ProperStrand	37	chr2	26493363	26493417	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-4.6603
chr5	118477951	118477967	protein_coding	Tesc	exon	ENSMUSG00000029359	ProperStrand	114	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.8824
chr5	130733043	130733060	protein_coding	Tyw1	utr5	ENSMUSG00000056310	ProperStrand	32	chrX	34622906	34623008	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-4.3443
chr19	41992186	41992520	protein_coding	Pgam1	exon	ENSMUSG00000011752	ProperStrand	124	chr16	23110828	23110940	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-0.9150
chr7	87240772	87240816	protein_coding-noncoding	Idh2	utr3	ENSMUSG00000030541	ProperStrand	1	chr11	68886948	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-inf
chr15	11774059	11774077	protein_coding	Npr3	utr3	ENSMUSG00000022206	NonProperStrand	3	chr3	123210902	123210985	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-8.0648
chr1	89105750	89105766	protein_coding	Chrng	exon	ENSMUSG00000026253	NonProperStrand	130	chr5	121655127	121655158	protein_coding	Rpl6	intron	ENSMUSG00000029614	ProperStrand	332	1	-8.3379
chr4	155217581	155217598	protein_coding	Mxra8	utr3	ENSMUSG00000029070	NonProperStrand	3	chr11	6428099	6428154	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-9.3720
chr2	28368857	28368876	protein_coding	Ralgds	utr5	ENSMUSG00000026821	NonProperStrand	60	chr7	116664794	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	18	-20.3787
chr10	79873821	79873911	protein_coding	Tcf3	intron	ENSMUSG00000020167	ProperStrand	73	chr4	131865861	131865941	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.4730
chr11	62121653	62121733	protein_coding	Ttc19	intron	ENSMUSG00000042298	ProperStrand	21	chr5	130300419	130300477	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	6	-24.8579
chr9	110253210	110253252	protein_coding	Scap	intron	ENSMUSG00000032485	ProperStrand	37	chr10	23505152	23505213	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-3.5654
chr17	57376723	57376741	protein_coding	Gpr108	exon	ENSMUSG00000005823	NonProperStrand	1	chr4	131908688	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-inf
chr11	59025989	59026079	protein_coding	Arf1	utr3	ENSMUSG00000048076	ProperStrand	52	chr1	162968458	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-6.3617
chr17	35384168	35384197	snoRNA	ENSMUSG00000065273_SNORD83	.	ENSMUSG00000065273	ProperStrand	244	chr18	35714169	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	4	-5.1166
chr4	21606097	21606114	protein_coding	Prdm13	exon	ENSMUSG00000040478	ProperStrand	51	chr11	68886928	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-4.4531
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr16	23111694	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	10	-8.5068
chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr1	89673615	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	15	-3.3308
chr4	32066803	32066820	protein_coding	Map3k7	exon	ENSMUSG00000028284	NonProperStrand	1	chr1	88247817	88247875	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	NonProperStrand	6	1	-inf
chr5	23825941	23825957	protein_coding	Kcnh2	exon	ENSMUSG00000038319	ProperStrand	242	chr7	19735204	19735220	protein_coding	Snrpd2	utr5	ENSMUSG00000040824	ProperStrand	23	1	-12.4587
chr14	70033970	70033996	protein_coding	Loxl2	exon	ENSMUSG00000034205	ProperStrand	28	chr14	33005065	33005091	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-5.4647
chr8	108049232	108049259	protein_coding	Atp6v0d1	exon	ENSMUSG00000013160	ProperStrand	35	chr8	129468745	129468845	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-5.4584
chr2	120996749	120996766	protein_coding	Tubgcp4	intron	ENSMUSG00000027263	ProperStrand	30	chr14	119026805	119026857	protein_coding	Abcc4	exon	ENSMUSG00000032849	ProperStrand	137	1	-13.0579
chr7	17580433	17580451	protein_coding	Ccdc8	exon	ENSMUSG00000041117	NonProperStrand	1	chr18	73693169	73693186	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-inf
chr7	29171540	29171558	protein_coding	Med29	utr3	ENSMUSG00000003444	NonProperStrand	134	chr1	95263746	95263763	protein_coding	Ppp1r7	utr3	ENSMUSG00000026275	ProperStrand	44	1	-12.3272
chr17	57209862	57209959	protein_coding	Dennd1c	exon	ENSMUSG00000002668	NonProperStrand	19	chr10	90432659	90432678	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	1	-12.9517
chr10	75359822	75360194	protein_coding	Smarcb1	exon	ENSMUSG00000000902	ProperStrand	109	chr11	98878342	98878371	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-5.1170
chr5	100824916	100828381	protein_coding	Sec31a	exon	ENSMUSG00000035325	ProperStrand	61	chr9	39358287	39358304	protein_coding	Olfr958	exon	ENSMUSG00000050853	NonProperStrand	266	1	-10.2948
chr3	58349511	58352377	protein_coding	Eif2a	exon	ENSMUSG00000027810	ProperStrand	11	chr17	24856633	24856713	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-9.8668
chrX	20249965	20257926	protein_coding	Uba1	exon	ENSMUSG00000001924	ProperStrand	156	chr16	23110942	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	7	-1.1656
chr13	76325971	76325997	protein_coding	Ttc37	utr3	ENSMUSG00000033991	ProperStrand	28	chr1	24620979	24621020	protein_coding	Gm10925	utr3	ENSMUSG00000090378	ProperStrand	320	1	-11.4993
chr2	90235286	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	35853255	35853271	protein_coding	Odz2	exon	ENSMUSG00000049336	ProperStrand	106	1	-3.3981
chr12	71292008	71292061	protein_coding	Pygl	exon	ENSMUSG00000021069	ProperStrand	4	chr5	130300528	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-7.9077
chr9	20673185	20673201	protein_coding	A230050P20Rik	utr5	ENSMUSG00000038884	ProperStrand	19	chr4	140277195	140277250	protein_coding	Rcc2	utr3	ENSMUSG00000040945	ProperStrand	228	1	-12.9704
chr14	24251850	24251866	protein_coding	Kcnma1	intron	ENSMUSG00000063142	NonProperStrand	104	chr3	123210913	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-2.3822
chr2	125548901	125548917	protein_coding	Shc4	exon	ENSMUSG00000035109	ProperStrand	19	chr11	83107849	83107902	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	1	-11.1654
chr2	10516304	10516372	protein_coding	Sfmbt2	utr3	ENSMUSG00000061186	ProperStrand	17	chrX	34622930	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-5.5847
chr5	123465451	123465510	protein_coding	Orai1	exon	ENSMUSG00000049686	ProperStrand	4	chr11	79518184	79518219	tRNA	tRNA550-ThrCGT	.	696249	ProperStrand	21	1	-19.5361
chr1	88247746	88247766	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	chr3	153574605	153574646	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	1	-1.8334
chr7	20282087	20282187	protein_coding	Apoe	exon	ENSMUSG00000002985	ProperStrand	231	chr15	79913288	79913343	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-1.3462
chr14	105363667	105363683	LTR	RMER17D2	ERVK	chr14RMER17D2105363569	ProperStrand	8	chr9	120038553	120038672	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	6	-20.7862
chr7	17581926	17581951	protein_coding	Ccdc8	exon	ENSMUSG00000041117	ProperStrand	7	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.4785
chr1	111995836	111995853	protein_coding	Cdh7	exon	ENSMUSG00000026312	ProperStrand	1	chr11	69481341	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-inf
chr14	60192623	60194610	protein_coding	Cdadc1	exon	ENSMUSG00000021982	ProperStrand	5	chr9	107518062	107518148	protein_coding	Gnai2	exon	ENSMUSG00000032562	ProperStrand	29	1	-inf
chr16	35084702	35084718	protein_coding	Ptplb	intron	ENSMUSG00000035376	NonProperStrand	1	chr16	23110964	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr4	126267806	126267880	protein_coding	Clspn	exon	ENSMUSG00000042489	ProperStrand	89	chr12	112779149	112779281	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	10	-20.0738
chr5	100082184	100082201	protein_coding	A930011G23Rik	intron	ENSMUSG00000089809	NonProperStrand	43	chr11	6428098	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.8060
chr7	13516164	13516199	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr10	110918547	110918637	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	4	-1.8502
chr9	44190618	44192258	protein_coding	Hyou1	exon	ENSMUSG00000032115	ProperStrand	145	chr7	116663634	116663712	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.1527
chr5	14252800	14252816	protein_coding	Sema3e	utr3	ENSMUSG00000063531	ProperStrand	125	chr1	162968440	162968480	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-4.6523
chr11	78313939	78313956	protein_coding	Vtn	exon	ENSMUSG00000017344	ProperStrand	188	chr1	132742958	132742974	protein_coding	Pigr	exon	ENSMUSG00000026417	NonProperStrand	48	1	-11.4720
chr11	33056714	33056747	protein_coding	Npm1	exon	ENSMUSG00000057113	ProperStrand	352	chr5	115940323	115940406	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	2	-8.5952
chr5	131882694	131882784	LINE	Lx9	L1	chr5Lx9131882473	ProperStrand	1	chr5	131882831	131882921	LINE	Lx9	L1	chr5Lx9131882676	ProperStrand	1	1	-inf
chr3	52388276	52388294	SINE	B4A	B4	chr3B4A52388218	ProperStrand	169	chr4	131908395	131908464	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	1	-5.2235
chr2	84670050	84670068	protein_coding	Timm10	exon	ENSMUSG00000027076	NonProperStrand	1	chr16	57391589	57391674	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	1	-inf
chr9	15119219	15119299	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	chr9	15119340	15119430	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	15	-inf
chr12	60235158	60235185	protein_coding	Ctage5	intron	ENSMUSG00000021000	ProperStrand	35	chr1	168239525	168239541	protein_coding	Ildr2	exon	ENSMUSG00000040612	ProperStrand	103	1	-13.3182
chr11	69419060	69419077	protein_coding	Atp1b2	utr5	ENSMUSG00000041329	NonProperStrand	7	chr19	9005912	9007750	protein_coding	Eml3	exon	ENSMUSG00000071647	ProperStrand	19	6	-21.4865
chr2	167310009	167310048	protein_coding	Spata2	exon	ENSMUSG00000047030	ProperStrand	9	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-8.1084
chr16	55969731	55970243	protein_coding	Rpl24	exon	ENSMUSG00000022601	ProperStrand	149	chr10	110918580	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	6	-11.8414
chr8	13416895	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr8	32260335	32260439	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	9	-3.9350
chr12	17556283	17556383	protein_coding	Odc1	exon	ENSMUSG00000011179	ProperStrand	173	chr10	62411990	62412021	protein_coding	Dna2	exon	ENSMUSG00000036875	ProperStrand	35	1	-12.2786
chrX	101156411	101156458	protein_coding	Rlim	utr3	ENSMUSG00000056537	ProperStrand	38	chr16	23110840	23110908	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.7634
chr7	125310693	125310783	protein_coding	Smg1	exon	ENSMUSG00000030655	ProperStrand	70	chr3	108230244	108231108	protein_coding	Sars	exon	ENSMUSG00000068739	ProperStrand	45	2	-inf
chr15	55369264	55369322	protein_coding	Mrpl13	intron	ENSMUSG00000022370	ProperStrand	11	chrX	35928319	35928336	protein_coding	Cul4b	intron	ENSMUSG00000031095	NonProperStrand	89	1	-15.9950
chr17	34042580	34042597	lincRNA	BC033916	exon	ENSMUSG00000092349	ProperStrand	19	chrX	84483701	84483743	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-10.5756
chr12	84040062	84040078	protein_coding	Rgs6	intron	ENSMUSG00000021219	NonProperStrand	65	chr2	104270464	104270907	protein_coding	Hipk3	exon	ENSMUSG00000027177	ProperStrand	5	1	-18.0233
chr14	71295884	71301302	protein_coding	Gfra2	exon	ENSMUSG00000022103	ProperStrand	26	chr8	18631897	18631914	protein_coding	Mcph1	exon	ENSMUSG00000039842	ProperStrand	34	1	-16.1242
chr16	4213190	4213222	protein_coding	Crebbp	exon	ENSMUSG00000022521	ProperStrand	56	chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	1	-9.0429
chr1	189536649	189536676	protein_coding	Esrrg	intron	ENSMUSG00000026610	ProperStrand	24	chr4	131865855	131865901	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.3401
chr9	98275393	98275412	protein_coding	Nmnat3	intron	ENSMUSG00000032456	NonProperStrand	19	chr4	131908356	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.3472
chr12	81310386	81310432	protein_coding	Actn1	exon	ENSMUSG00000015143	ProperStrand	128	chr12	112779197	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	4	-11.2581
chr17	71323779	71324801	protein_coding	Myl12b	exon	ENSMUSG00000034868	ProperStrand	35	chr16	23110828	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.8578
chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	chr4	131866155	131866292	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-1.5124
chr8	124406854	124406879	protein_coding	Slc7a5	utr3	ENSMUSG00000040010	ProperStrand	166	chr11	6428035	6428089	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.5044
chr7	130423553	130423571	protein_coding	Arhgap17	utr3	ENSMUSG00000030766	NonProperStrand	5	chr4	131908243	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-6.0411
chr12	106169938	106170018	protein_coding	4831426I19Rik	utr3	ENSMUSG00000054150	ProperStrand	5	chr4	131908357	131908447	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-6.0411
chr5	117542908	117542986	protein_coding	Suds3	utr3	ENSMUSG00000066900	ProperStrand	22	chr8	73419657	73419682	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-5.0290
chr17	29079819	29079840	SINE	ID_B1	B4	chr17ID_B129079688	ProperStrand	1	chr9	15119646	15119736	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-inf
chr6	137331243	137334696	protein_coding	Ptpro	exon	ENSMUSG00000030223	ProperStrand	6	chr2	26493364	26493481	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-8.3724
chr13	8884865	8884882	protein_coding	Idi1	utr5	ENSMUSG00000058258	NonProperStrand	1	chr2	26494763	26494824	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-inf
chr17	26645334	26645352	protein_coding	Dusp1	utr5	ENSMUSG00000024190	ProperStrand	16	chr11	6428097	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.7293
chr2	34559750	34559840	protein_coding	Gapvd1	exon	ENSMUSG00000026867	ProperStrand	31	chr8	129468788	129468868	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-5.6976
chr2	166859325	166859540	protein_coding	Ddx27	exon	ENSMUSG00000017999	ProperStrand	55	chr9	64022868	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	2	-13.0708
chr1	181683587	181683671	protein_coding	Ahctf1	exon	ENSMUSG00000026491	NonProperStrand	4	chr9	15119646	15119746	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	NonProperStrand	21	2	-19.7625
chr11	100381639	100383367	protein_coding	Acly	exon	ENSMUSG00000020917	ProperStrand	183	chr19	8800392	8800422	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-1.6354
chr18	67564651	67564671	protein_coding	Afg3l2	utr3	ENSMUSG00000024527	ProperStrand	43	chr3	123210893	123210983	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.6276
chr19	8963051	8963165	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	chr17	24857766	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	NonProperStrand	27	2	-18.7158
chr12	83098615	83098632	protein_coding	Pcnx	utr3	ENSMUSG00000021140	NonProperStrand	14	chr16	23111726	23111826	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.5328
chr13	79659338	79659354	LTR	RodERV21-int	ERV1	chr13RodERV21-int79658190	ProperStrand	43	chr6	45494575	45494594	protein_coding	Cntnap2	intron	ENSMUSG00000039419	NonProperStrand	283	1	-10.8756
chr14	35507857	35507942	protein_coding	Wapal	intron	ENSMUSG00000041408	ProperStrand	93	chr11	69483187	69483277	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-3.1961
chr2	31875817	31880802	protein_coding	Nup214	exon	ENSMUSG00000001855	ProperStrand	62	chr19	8800423	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-3.4696
chr4	123129431	123129521	protein_coding	Macf1	exon	ENSMUSG00000028649	ProperStrand	320	chr2	26494729	26494809	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	3	-2.2387
chr2	31657008	31657098	protein_coding	Abl1	exon	ENSMUSG00000026842	ProperStrand	131	chr2	26768368	26768416	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-4.1003
chr17	75790277	75790293	protein_coding	Ltbp1	utr3	ENSMUSG00000001870	NonProperStrand	66	chr11	118900007	118900026	protein_coding	Cbx8	exon	ENSMUSG00000025578	ProperStrand	95	1	-12.1981
chr10	79322160	79326237	protein_coding	Ptbp1	exon	ENSMUSG00000006498	ProperStrand	129	chr7	116664811	116664901	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-2.5486
chr9	22038352	22038426	protein_coding	Zfp809	intron	ENSMUSG00000057982	ProperStrand	10	chr9	15130707	15130739	snoRNA	ENSMUSG00000077506_Scarna9	.	ENSMUSG00000077506	ProperStrand	148	3	-20.5452
chr17	34173668	34173839	protein_coding	Rxrb	exon	ENSMUSG00000039656	ProperStrand	34	chr1	88247768	88247868	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-6.2127
mmu-miR-690	1	18	miRNA	mmu-miR-690	.	mmu-miR-690	ProperStrand	63	chr14	19071593	19071610	protein_coding	Nr1d2	utr5	ENSMUSG00000021775	ProperStrand	33	1	-14.4197
chr6	48410411	48410428	protein_coding	Sspo	exon	ENSMUSG00000029797	NonProperStrand	94	chr13	51743567	51743639	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-5.9737
chr8	113447148	113447169	protein_coding	St3gal2	intron	ENSMUSG00000031749	ProperStrand	206	chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	1	-8.9634
chr11	116535917	116535981	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr7	52713405	52713505	protein_coding	Ftl1	utr3	ENSMUSG00000050708	ProperStrand	807	1	-1.2986
chr5	114689776	114689792	protein_coding	Acacb	exon	ENSMUSG00000042010	NonProperStrand	4	chr7	52381973	52382010	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-12.3680
chr9	21089761	21091051	protein_coding	Kri1	exon	ENSMUSG00000035047	ProperStrand	10	chr7	29136615	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.7572
chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	chr1	162965530	162965599	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	4	-2.4839
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr1	89136620	89136638	protein_coding	Eif4e2	utr3	ENSMUSG00000026254	ProperStrand	26	1	-10.2933
chr2	90235294	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	63042015	63042031	protein_coding	Map2k5	exon	ENSMUSG00000058444	ProperStrand	193	3	-6.2385
chr19	23288649	23332040	protein_coding	Smc5	exon	ENSMUSG00000024943	ProperStrand	146	chr4	131908810	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-1.3105
chr1	24333002	24334887	protein_coding	Col19a1	exon	ENSMUSG00000026141	ProperStrand	37	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.0895
chr13	115082656	115082672	protein_coding	Ndufs4	intron	ENSMUSG00000021764	NonProperStrand	11	chr13	90238665	90238719	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	1	-12.1076
chr8	74000451	74008417	protein_coding	Ano8	exon	ENSMUSG00000034863	NonProperStrand	171	chr7	29136525	29136614	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	5	-5.5731
chr18	54582045	54582061	lincRNA	9430076G02Rik	exon	ENSMUSG00000084814	ProperStrand	30	chr16	23110965	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0481
chr17	13115655	13115776	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	chr19	8963023	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	20	-6.7458
chr7	5985849	5985930	LINE	Lx5	L1	chr7Lx55984891	ProperStrand	4	chr7	5986082	5986172	SINE	B1_Mus2	Alu	chr7B1_Mus25986087	ProperStrand	1	1	-inf
chr15	81297233	81297250	protein_coding	Rbx1	intron	ENSMUSG00000022400	ProperStrand	78	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-7.2169
chr17	36005177	36005195	protein_coding	Ppp1r18	exon	ENSMUSG00000034595	NonProperStrand	17	chr10	23505152	23505270	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.3129
chr5	15359325	15359342	SINE	B4A	B4	chr5B4A15359022	ProperStrand	5	chr8	73201931	73201981	protein_coding	Lsm4	exon	ENSMUSG00000031848	ProperStrand	19	1	-19.2987
chr7	54105671	54105697	protein_coding	Ldha	exon	ENSMUSG00000063229	ProperStrand	280	chr11	97642952	97643056	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-0.9367
mmu-miR-5100	5	20	miRNA	mmu-miR-5100	.	mmu-miR-5100	ProperStrand	132	chr9	120039582	120039682	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.9621
chr5	76584129	76584219	protein_coding	Srd5a3	utr3	ENSMUSG00000029233	ProperStrand	11	chr16	23110855	23110935	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-4.7202
chr19	5105061	5105151	protein_coding	Rab1b	intron	ENSMUSG00000024870	ProperStrand	133	chr4	131908264	131908344	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-1.0608
chr19	4265911	4265929	protein_coding	Ssh3	exon	ENSMUSG00000034616	NonProperStrand	3	chr7	116663633	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-inf
chr15	79913288	79913319	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr1	59748785	59748826	snoRNA	ENSMUSG00000077345_Snord70	.	ENSMUSG00000077345	ProperStrand	61	1	-3.5617
chr4	154500680	154500696	protein_coding	Morn1	intron	ENSMUSG00000029049	NonProperStrand	22	chr16	23110827	23110851	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.4786
chr14	73605343	73605422	protein_coding	Rb1	intron	ENSMUSG00000022105	ProperStrand	67	chr12	8505032	8505088	protein_coding	Rhob	utr3	ENSMUSG00000054364	ProperStrand	10	1	-16.7136
chr4	133236171	133236261	protein_coding	Arid1a	utr3	ENSMUSG00000007880	ProperStrand	465	chr16	18240844	18240924	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	1	-5.0821
chr2	157391566	157391631	protein_coding	Blcap	intron	ENSMUSG00000067787	ProperStrand	13	chr19	8800379	8800469	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-6.5148
chr13	8756715	8766307	protein_coding	Adarb2	utr3	ENSMUSG00000052551	ProperStrand	292	chr12	17552962	17553030	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	2	-3.9261
chr14	19102860	19102950	protein_coding	Rpl15	exon	ENSMUSG00000012405	ProperStrand	145	chr4	131908763	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-0.7219
chr9	65010536	65010552	protein_coding	Igdcc3	intron	ENSMUSG00000032394	ProperStrand	17	chr5	108334195	108334266	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-7.3226
chr16	33767649	33767739	protein_coding	Heg1	utr3	ENSMUSG00000075254	ProperStrand	19	chr8	129468750	129468830	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-6.6760
chr17	25776197	25776297	protein_coding	Lmf1	intron	ENSMUSG00000002279	ProperStrand	3	chr16	23110962	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr8	125731536	125731552	protein_coding	Gm20388	intron	ENSMUSG00000092329	ProperStrand	295	chr12	17552949	17552994	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-2.1853
chr17	27236036	27236052	protein_coding	Itpr3	exon	ENSMUSG00000042644	ProperStrand	137	chr10	23506279	23506347	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-5.3248
chr10	62486473	62486559	protein_coding	Hnrnph3	utr5	ENSMUSG00000020069	ProperStrand	17	chr17	35087895	35087962	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-7.7141
chr17	35295027	35295906	protein_coding	Prrc2a	exon	ENSMUSG00000024393	ProperStrand	315	chr7	116664826	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	6	-4.4383
chr18	15221855	15221871	protein_coding	Kctd1	exon	ENSMUSG00000036225	ProperStrand	16	chr4	131865866	131865917	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.1079
chr11	117622447	117622539	protein_coding	Tnrc6c	utr3	ENSMUSG00000025571	ProperStrand	51	chr5	74489642	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-4.0832
chr13	96100553	96100670	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	chr7	118219574	118219665	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	5	-3.0294
chr8	86620334	86620404	protein_coding	Rfx1	utr3	ENSMUSG00000031706	ProperStrand	20	chr5	130300417	130300517	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	4	-14.6748
chr2	173604466	173604495	protein_coding	Vapb	utr3	ENSMUSG00000054455	ProperStrand	29	chr4	59175428	59175448	pseudogene	Rpsa-ps11	.	ENSMUSG00000082978	NonProperStrand	1	1	-inf
chr1	88247219	88247414	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chr5	111185396	111185486	protein_coding	Ep400	exon	ENSMUSG00000029505	ProperStrand	176	7	-19.5532
chr3	23221229	23221269	LINE	L1Md_F2	L1	chr3L1Md_F223217798	ProperStrand	1	chr7	16524110	16524159	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	1	-inf
chr1	133252344	133252403	protein_coding	Srgap2	intron	ENSMUSG00000026425	ProperStrand	299	chr4	131865396	131865496	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-1.2949
chr11	119136228	119136244	protein_coding	Gaa	exon	ENSMUSG00000025579	NonProperStrand	201	chr9	15119967	15120040	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-4.8830
chr11	51414691	51414736	protein_coding	Hnrnpab	utr3	ENSMUSG00000020358	ProperStrand	124	chr3	129340808	129340898	protein_coding	Elovl6	utr3	ENSMUSG00000041220	ProperStrand	59	4	-20.2592
chr16	6456240	6456257	Other	RMER1C	Other	chr16RMER1C6456169	ProperStrand	7	chrX	84483704	84483720	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-12.6702
chr14	61113419	61113436	LINE	L1MB3	L1	chr14L1MB361113375	NonProperStrand	72	chr19	31158511	31158567	protein_coding	Cstf2t	exon	ENSMUSG00000053536	ProperStrand	48	1	-13.3966
chr15	45130788	45130810	LINE	L1_Mus2	L1	chr15L1_Mus245129537	NonProperStrand	17	chr6	126075509	126075526	protein_coding	Ntf3	intron	ENSMUSG00000049107	NonProperStrand	38	1	-16.8697
chr1	188560104	188561476	protein_coding	Rrp15	exon	ENSMUSG00000001305	ProperStrand	16	chr7	116663713	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.9773
chr9	75236013	75236048	protein_coding	Mapk6	exon	ENSMUSG00000042688	ProperStrand	25	chr16	23111770	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.4223
chr2	103606006	103606114	protein_coding	Caprin1	utr3	ENSMUSG00000027184	ProperStrand	145	chr2	130101288	130101310	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-4.8668
chr14	123332367	123332457	lincRNA	4930594M22Rik	intron	ENSMUSG00000075463	ProperStrand	2	chr2	130281071	130281151	protein_coding	Ptpra	intron	ENSMUSG00000027303	NonProperStrand	2	1	-inf
chr10	12083204	12083238	snRNA	ENSMUSG00000065096_U1	.	ENSMUSG00000065096	NonProperStrand	1	chr18	35714144	35714257	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	NonProperStrand	47	1	-inf
chr9	36130809	36130899	LINE	L1Md_F2	L1	chr9L1Md_F236124821	NonProperStrand	1	chr9	35089360	35089440	protein_coding	Gm5614	intron	ENSMUSG00000066771	NonProperStrand	1	1	-inf
chr10	127522668	127523169	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr9	64024475	64024555	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	1	-3.8383
chr7	31371385	31371441	protein_coding	Wbp7	exon	ENSMUSG00000006307	ProperStrand	180	chr11	6428035	6428119	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.3879
chr9	78326555	78326581	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr8	41570003	41570019	protein_coding	Zdhhc2	utr3	ENSMUSG00000039470	NonProperStrand	85	1	-5.6496
chr14	67623334	67623384	protein_coding	Bnip3l	intron	ENSMUSG00000022051	ProperStrand	30	chr16	23111770	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-7.9239
chr12	77356429	77356483	protein_coding	Mthfd1	utr5	ENSMUSG00000021048	ProperStrand	71	chr4	131908689	131908748	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.0037
chr7	109272694	109272756	protein_coding	Nup98	exon	ENSMUSG00000063550	ProperStrand	100	chr12	112779147	112779227	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-3.8075
chr9	96978177	96978213	protein_coding	Slc25a36	utr3	ENSMUSG00000032449	ProperStrand	159	chr17	24857750	24857840	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	4	-4.2286
chr2	73275191	73275207	protein_coding	Wipf1	exon	ENSMUSG00000075284	NonProperStrand	8	chr11	106362335	106362383	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-9.9436
chr4	107596083	107596100	protein_coding	Cpt2	utr5	ENSMUSG00000028607	NonProperStrand	106	chr4	131908277	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-2.4549
chr16	23110566	23110584	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr3	108357290	108357390	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-0.9605
chr11	69481363	69481479	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	chr11	68876540	68876574	tRNA	tRNA1821-SerGCT	.	11455	ProperStrand	39	1	-3.9984
chrX	151449702	151449792	LINE	L1Md_T	L1	chrXL1Md_T151449377	NonProperStrand	1	chr14	34780583	34780663	protein_coding	Zfp488	utr3	ENSMUSG00000044519	ProperStrand	54	1	-inf
chrX	71516324	71516352	protein_coding	Rpl10	utr5	ENSMUSG00000008682	ProperStrand	71	chr9	64024973	64024998	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	2	-13.9762
chr5	35218608	35218624	protein_coding	Htt	exon	ENSMUSG00000029104	NonProperStrand	9	chr4	131908236	131908342	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.8019
chr11	87172190	87172206	protein_coding	Ppm1e	exon	ENSMUSG00000046442	ProperStrand	112	chr11	6428102	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.1142
chr11	101324378	101327026	protein_coding	Vat1	exon	ENSMUSG00000034993	ProperStrand	69	chr5	108336380	108336470	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-4.6120
chr19	24169223	24169268	protein_coding	Tjp2	utr3	ENSMUSG00000024812	ProperStrand	63	chr10	23505152	23505254	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-3.6321
chr2	84877978	84878025	protein_coding	Ssrp1	utr5	ENSMUSG00000027067	ProperStrand	118	chr9	15514257	15514275	protein_coding	Slc36a4	exon	ENSMUSG00000043885	ProperStrand	94	1	-11.0527
chr15	85814186	85862485	protein_coding	Celsr1	exon	ENSMUSG00000016028	ProperStrand	56	chr16	23110827	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-1.6219
chr2	72134872	72134889	protein_coding	B230120H23Rik	intron	ENSMUSG00000004085	NonProperStrand	26	chr3	123210943	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.5360
chr16	44160409	44160491	protein_coding	Naa50	utr3	ENSMUSG00000022698	ProperStrand	56	chr18	35102295	35102345	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-6.7268
chr6	3486928	3495547	protein_coding	Ccdc132	exon	ENSMUSG00000001376	ProperStrand	13	chr5	130300494	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-12.8632
chr11	6520322	6520402	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	chr5	108336400	108336490	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-1.0252
chr6	108423417	108423507	protein_coding	Itpr1	exon	ENSMUSG00000030102	ProperStrand	94	chr13	96100555	96100635	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	26	-19.2815
chr11	96133152	96133171	protein_coding	Hoxb9	exon	ENSMUSG00000020875	NonProperStrand	22	chr5	108334195	108334330	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-6.8002
chr8	48580362	48580399	protein_coding	D030016E14Rik	exon	ENSMUSG00000038102	ProperStrand	15	chr5	130300448	130300538	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-5.1031
chr5	121070764	121071675	protein_coding	Ddx54	exon	ENSMUSG00000029599	ProperStrand	104	chr17	24343586	24343602	protein_coding	Ntn3	exon	ENSMUSG00000079662	ProperStrand	237	1	-9.4552
chr12	55796767	55796784	protein_coding	Eapp	utr5	ENSMUSG00000054302	NonProperStrand	62	chr5	121655031	121655093	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.6866
chr9	36558794	36558884	protein_coding	Stt3a	exon	ENSMUSG00000032116	ProperStrand	31	chr7	29136573	29136653	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-8.8650
chr19	40194201	40194223	LINE	Lx2	L1	chr19Lx240189486	ProperStrand	24	chr18	35716689	35716779	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.8034
chr18	34792078	34792136	protein_coding	Kif20a	exon	ENSMUSG00000003779	ProperStrand	50	chr11	83107807	83107903	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	1	-9.2022
chr6	70794803	70794819	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chr13	51743582	51743663	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-5.0132
chr11	106007000	106007037	protein_coding	Map3k3	exon	ENSMUSG00000020700	ProperStrand	36	chr5	74489551	74489641	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-4.7499
chr4	46618686	46618776	protein_coding	Tbc1d2	exon	ENSMUSG00000039813	ProperStrand	12	chrX	34622910	34622990	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-10.3082
chr2	32666638	32702594	protein_coding	Stxbp1	exon	ENSMUSG00000026797	ProperStrand	33	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	3	-14.6398
chr2	153050783	153050799	protein_coding	Tspyl3	exon	ENSMUSG00000074671	ProperStrand	228	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	5	-6.7114
chr11	100343561	100345060	protein_coding	Acly	exon	ENSMUSG00000020917	ProperStrand	183	chr5	108334196	108334276	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-2.7570
chr13	8756707	8766308	protein_coding	Adarb2	utr3	ENSMUSG00000052551	ProperStrand	292	chr5	108334195	108334256	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	3	-5.4263
chr11	83107808	83107890	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	chr12	106269284	106269427	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	6	-6.0112
chr11	116535931	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr14	76245454	76246057	protein_coding	Tpt1	exon	ENSMUSG00000060126	ProperStrand	236	1	-3.3056
chr17	24368305	24368395	protein_coding	Ccnf	exon	ENSMUSG00000072082	ProperStrand	149	chr5	111121070	111121150	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-4.6622
chr4	41707315	41707332	protein_coding	Il11ra1	utr5	ENSMUSG00000073889	ProperStrand	128	chr16	23111778	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-0.8482
chr10	7435470	7435555	protein_coding	Lats1	utr3	ENSMUSG00000040021	ProperStrand	13	chr4	131865414	131865504	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	2	-11.3941
chr19	5797446	5797500	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr1	72272872	72272962	snRNA	ENSMUSG00000075752_U2	.	ENSMUSG00000075752	ProperStrand	535	1	-3.3261
chr1	71650502	71686996	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr19	8799829	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	4	-3.0502
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr6	85895881	85895897	protein_coding	Dusp11	utr3	ENSMUSG00000030002	ProperStrand	37	1	-14.1304
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr1	24621377	24621394	protein_coding	Gm10925	exon	ENSMUSG00000090378	NonProperStrand	70	1	-8.2845
chr7	148634799	148634846	protein_coding-noncoding	Rplp2	utr5	ENSMUSG00000025508	ProperStrand	11	chr8	73419657	73419757	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-6.4238
chr14	19115771	19115836	protein_coding	Ube2e1	utr3	ENSMUSG00000021774	ProperStrand	8	chr4	131908358	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-5.0428
chr17	45704879	45704979	protein_coding	Hsp90ab1	utr3	ENSMUSG00000023944	ProperStrand	1627	chr18	35102297	35102354	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	2	-1.7104
chr11	68886974	68887037	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	chr1	173033210	173033254	tRNA	tRNA709-GluCTC	.	236362	ProperStrand	15	3	-15.8235
chr12	35062988	35063005	protein_coding	Hdac9	intron	ENSMUSG00000004698	NonProperStrand	25	chr19	8963083	8963182	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.8447
chr3	127532132	127532149	protein_coding	Ap1ar	intron	ENSMUSG00000074238	ProperStrand	5	chr15	5068407	5068452	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-11.2001
chr4	155494248	155494338	protein_coding	9430015G10Rik	intron	ENSMUSG00000059939	ProperStrand	17	chr4	131908260	131908340	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.5556
chr3	97736741	97736759	lincRNA	Gm5544	intron	ENSMUSG00000074388	ProperStrand	4	chr19	8799022	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	3	-20.0641
chr6	36760899	36760918	protein_coding	Ptn	utr5	ENSMUSG00000029838	ProperStrand	2	chr7	52381973	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	2	-inf
chr13	21874830	21874899	protein_coding	Hist1h3i	exon	ENSMUSG00000075032	ProperStrand	12	chr14	76247751	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-7.3616
chr6	147535053	147535133	protein_coding	Ccdc91	intron	ENSMUSG00000030301	ProperStrand	15	chr19	8800084	8800140	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-10.4167
chr7	133941261	133941287	protein_coding	Aldoa	utr5	ENSMUSG00000030695	ProperStrand	721	chr2	158185530	158185655	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-1.9012
chr14	64112724	64112758	protein_coding	Tdh	exon	ENSMUSG00000021953	ProperStrand	67	chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	2	-14.5371
chr1	153321068	153321113	protein_coding	Rnf2	intron	ENSMUSG00000026484	ProperStrand	13	chr4	131908689	131908771	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.8088
chr5	135537060	135537123	protein_coding-noncoding	Wbscr22	utr3	ENSMUSG00000005378	ProperStrand	2	chr16	23110911	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-inf
chr2	166731622	166731657	protein_coding	Cse1l	utr5	ENSMUSG00000002718	ProperStrand	22	chr14	31827517	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-8.9621
chr19	45409733	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr11	79507642	79507723	protein_coding	Rab11fip4	utr3	ENSMUSG00000017639	ProperStrand	30	5	-inf
chr4	108278918	108278934	protein_coding	Orc1	exon	ENSMUSG00000028587	ProperStrand	161	chr18	73693114	73693139	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-3.6420
chr1	143167109	143167189	LINE	L1VL4	L1	chr1L1VL4143167026	ProperStrand	1	chr1	125766281	125766371	protein_coding	Dpp10	intron	ENSMUSG00000036815	NonProperStrand	1	1	-inf
chr18	36961576	36961663	misc_RNA	Vault	.	ENSMUSG00000065145	ProperStrand	177	chr7	67125791	67125830	snoRNA	ENSMUSG00000089375_Snord107	.	ENSMUSG00000089375	ProperStrand	451	2	-11.4300
chr9	64143806	64143874	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	chr1	89681129	89681179	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-0.7787
chr17	36065166	36065208	protein_coding	Ppp1r10	exon	ENSMUSG00000039220	ProperStrand	45	chr8	73419724	73419774	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-6.2101
chr10	82456766	82456784	protein_coding	Chst11	intron	ENSMUSG00000034612	ProperStrand	170	chr16	23111372	23111448	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	6	-3.4614
chr2	90235291	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	107800727	107800817	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	2	-0.9602
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr5	75473198	75473215	protein_coding	Gsx2	utr3	ENSMUSG00000035946	ProperStrand	307	2	-4.9087
chr11	98878357	98878447	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	chr1	129228400	129228466	snoRNA	ENSMUSG00000093146_AC131793.1	.	ENSMUSG00000093146	ProperStrand	119	1	-4.9476
chr5	54389951	54389967	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	chr2	26493364	26493403	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-1.5880
chr14	31380135	31380215	protein_coding	Tkt	exon	ENSMUSG00000021957	ProperStrand	160	chr2	158185554	158185645	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-4.5762
chr19	31343298	31343315	protein_coding	Prkg1	intron	ENSMUSG00000052920	ProperStrand	32	chr15	79908956	79908984	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-6.7153
chr17	56199463	56199493	protein_coding	Chaf1a	intron	ENSMUSG00000002835	ProperStrand	23	chr11	62416972	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-7.9594
chr3	120907458	120907475	protein_coding	Tmem56	utr3	ENSMUSG00000028132	ProperStrand	30	chr4	131908689	131908801	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.2894
chr5	30969300	30969316	protein_coding	Cenpa	utr5	ENSMUSG00000029177	ProperStrand	18	chr11	51551280	51551380	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	1	-10.1334
chr2	25563070	25563086	antisense	A230005M16Rik	.	ENSMUSG00000087612	ProperStrand	103	chr8	73419875	73419898	protein_coding	Rpl18a	exon	ENSMUSG00000045128	ProperStrand	394	1	-8.4617
chr13	56962398	56962414	protein_coding	Trpc7	exon	ENSMUSG00000021541	ProperStrand	50	chr6	131330290	131330390	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	ProperStrand	408	1	-9.8407
chr9	118466104	118466194	protein_coding	Golga4	exon	ENSMUSG00000038708	ProperStrand	95	chr4	131866154	131866234	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-2.8334
chr9	63066908	63066926	protein_coding	Map2k5	intron	ENSMUSG00000058444	NonProperStrand	79	chr4	116828379	116828453	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-7.8326
chr5	112807196	112807260	protein_coding	Hps4	utr3	ENSMUSG00000042328	ProperStrand	27	chr4	131865856	131865946	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.1241
chr17	56745040	56745279	protein_coding	Safb	utr3	ENSMUSG00000071054	ProperStrand	79	chr7	148634803	148634836	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	4	-11.6135
chr9	15130702	15130794	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	chr7	116663652	116663759	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	8	-4.3888
chr17	45725961	45726020	protein_coding	Slc29a1	exon	ENSMUSG00000023942	ProperStrand	95	chr11	69483136	69483180	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.7050
chrX	70237450	70237471	miRNA	Mir2137	.	ENSMUSG00000089357	ProperStrand	50	chr7	116664809	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	4	-10.0597
chr19	8963032	8963048	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	chr18	35714144	35714246	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-0.9413
chr7	97592043	97592133	protein_coding	Crebzf	exon	ENSMUSG00000051451	ProperStrand	24	chr3	123210882	123210972	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	14	-20.7283
chr18	35714269	35714296	lincRNA	Snhg4	intron	ENSMUSG00000090430	ProperStrand	270	chr9	15119631	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	5	-4.1657
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr15	21356167	21356183	protein_coding	Cdh12	intron	ENSMUSG00000040452	NonProperStrand	1	1	-inf
chr13	6548903	6551905	protein_coding	Pitrm1	exon	ENSMUSG00000021193	ProperStrand	28	chr8	98252572	98252604	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	3	-19.1828
chr10	38303780	38303870	LINE	L1VL1	L1	chr10L1VL138303077	NonProperStrand	1	chr7	54442399	54442479	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	1	-inf
chr14	66093251	66093268	LTR	MLT1A1	MaLR	chr14MLT1A166093179	ProperStrand	31	chr7	28091883	28092835	protein_coding	Ltbp4	exon	ENSMUSG00000040488	ProperStrand	91	5	-19.5871
chr5	24220285	24220361	protein_coding-noncoding	Wdr86	utr3	ENSMUSG00000055235	ProperStrand	2	chr18	35716834	35716865	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-inf
chr13	29999159	29999175	protein_coding	E2f3	utr3	ENSMUSG00000016477	ProperStrand	8	chr4	131865854	131865977	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.4974
chr17	24294168	24294220	protein_coding	Amdhd2	intron	ENSMUSG00000036820	ProperStrand	11	chr9	120037989	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-8.1004
chr4	117811168	117811476	protein_coding	Kdm4a	exon	ENSMUSG00000033326	ProperStrand	81	chr11	106362304	106362327	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-5.2561
chr11	68200228	68200307	protein_coding	Ntn1	utr5	ENSMUSG00000020902	ProperStrand	44	chr19	6306768	6306800	protein_coding	Cdc42bpg	exon	ENSMUSG00000024769	ProperStrand	90	2	-inf
chr13	9833580	9833615	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr6	115686445	115691565	protein_coding	Tmem40	exon	ENSMUSG00000059900	NonProperStrand	6	1	-9.6506
chr4	88366879	88366905	protein_coding	Klhl9	exon	ENSMUSG00000070923	ProperStrand	7	chr16	23110913	23111003	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.4785
chr5	108334231	108334331	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	chr10	90644840	90644873	tRNA	tRNA856-AspGTC	.	1366715	ProperStrand	65	1	-4.6659
chrX	72214248	72214264	protein_coding-noncoding	Gab3	utr3	ENSMUSG00000032750	ProperStrand	420	chr18	73693166	73693190	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-1.9774
chr2	164662245	164662267	protein_coding	Ctsa	intron	ENSMUSG00000017760	NonProperStrand	1	chr5	121655016	121655126	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-inf
chr12	84888337	84888399	protein_coding	Zfyve1	utr3	ENSMUSG00000042628	ProperStrand	28	chr11	62418025	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	2	-11.4004
chr9	114615133	114615205	protein_coding	Dync1li1	exon	ENSMUSG00000032435	ProperStrand	33	chr5	130300477	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-6.1056
chr17	31231618	31231702	protein_coding	Abcg1	exon	ENSMUSG00000024030	ProperStrand	36	chr9	120039557	120039647	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	10	-21.4711
chr9	106335478	106335494	protein_coding	Acy1	exon	ENSMUSG00000023262	NonProperStrand	1	chr15	102147284	102147546	protein_coding	Espl1	exon	ENSMUSG00000058290	ProperStrand	172	1	-inf
chr15	79664579	79664595	protein_coding	Npcd	exon	ENSMUSG00000089837	NonProperStrand	6	chr17	35088971	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-10.5918
chr11	77350704	77350726	protein_coding	Taok1	utr3	ENSMUSG00000017291	ProperStrand	41	chr7	118219575	118219628	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-8.1083
chr1	192878639	192878661	protein_coding	Tatdn3	intron	ENSMUSG00000026632	ProperStrand	2	chr17	35087895	35087945	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	2	-inf
chr9	106561181	106561197	protein_coding	Tex264	utr3	ENSMUSG00000040813	ProperStrand	18	chr13	43494896	43495980	protein_coding	Nol7	exon	ENSMUSG00000063200	ProperStrand	4	1	-19.8468
chr14	56197289	56197313	protein_coding	Psme1	utr5	ENSMUSG00000022216	ProperStrand	2	chr4	129761516	129761532	protein_coding	Col16a1	exon	ENSMUSG00000040690	ProperStrand	21	1	-inf
chr6	116210645	116212399	protein_coding	D6Wsu116e	exon	ENSMUSG00000024104	ProperStrand	21	chr4	130305551	130305619	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	1	-12.0365
chr4	101106213	101106304	protein_coding	Ak4	intron	ENSMUSG00000028527	ProperStrand	20	chr18	13088630	13088649	protein_coding	Osbpl1a	intron	ENSMUSG00000044252	ProperStrand	39	2	-19.4579
chrX	115443369	115443385	LINE	Lx3A	L1	chrXLx3A115443230	NonProperStrand	12	chrX	84483725	84483751	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-11.5257
chr1	71651598	71651625	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr1	88426786	88426830	protein_coding	Ptma	utr3	ENSMUSG00000026238	ProperStrand	385	1	-4.2036
chr5	31375522	31375584	protein_coding	Cad	exon	ENSMUSG00000013629	ProperStrand	260	chr2	26768394	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-2.8502
chr5	136972388	136972420	protein_coding	Cux1	intron	ENSMUSG00000029705	ProperStrand	19	chr11	77995188	77995236	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-8.4897
chr17	28342595	28342725	protein_coding	Zfp523	utr3	ENSMUSG00000024220	ProperStrand	26	chr14	73023134	73023162	protein_coding	Fndc3a	intron	ENSMUSG00000033487	ProperStrand	84	6	-inf
chr13	24128419	24133555	protein_coding	Lrrc16a	exon	ENSMUSG00000021338	ProperStrand	12	chr7	117189944	117190034	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-6.4655
chr10	80644812	80644834	protein_coding	Eef2	utr3	ENSMUSG00000034994	ProperStrand	2244	chr15	57807534	57807583	tRNA	tRNA913-MetCAT	.	834618	ProperStrand	48	2	-10.5810
chr6	117795659	117795676	protein_coding	Zfp637	exon	ENSMUSG00000059689	NonProperStrand	53	chr5	130300419	130300516	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-7.0982
chr14	45949538	45949554	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	chr17	24858085	24858119	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	1	-6.2879
chr12	82873537	82873589	protein_coding	Map3k9	intron	ENSMUSG00000042724	ProperStrand	92	chr10	23505190	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-2.4837
chr2	160573794	160576721	protein_coding	Plcg1	exon	ENSMUSG00000016933	ProperStrand	65	chr13	64863287	64863304	protein_coding	Cntnap3	exon	ENSMUSG00000033063	ProperStrand	87	1	-12.4058
chr12	92797375	92797425	protein_coding	Gtf2a1	utr3	ENSMUSG00000020962	ProperStrand	61	chr15	35419764	35419799	protein_coding	Vps13b	intron	ENSMUSG00000037646	ProperStrand	56	1	-13.4201
chr7	53128302	53128352	protein_coding	Kdelr1	utr5	ENSMUSG00000002778	ProperStrand	7	chr1	38078614	38078631	protein_coding	Eif5b	exon	ENSMUSG00000026083	ProperStrand	118	1	-16.4058
chr13	23844245	23844289	protein_coding	Hist1h3b	utr5	ENSMUSG00000069267	ProperStrand	25	chr9	15118323	15118378	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-8.4897
chr6	87931063	87931159	protein_coding	H1fx	exon	ENSMUSG00000044927	ProperStrand	13	chr16	23110973	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.3283
chr7	150251911	150252176	protein_coding	Cd81	exon	ENSMUSG00000037706	ProperStrand	88	chr9	64022873	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	2	-11.6540
chr3	32820061	32820078	protein_coding	Usp13	intron	ENSMUSG00000056900	ProperStrand	15	chr1	162966813	162966853	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-9.0520
chr10	126719280	126719359	protein_coding	Mbd6	utr3	ENSMUSG00000025409	ProperStrand	12	chr8	39010252	39010269	protein_coding	Sgcz	intron	ENSMUSG00000039539	NonProperStrand	14	1	-inf
chr15	89200712	89200888	protein_coding	Ncaph2	exon	ENSMUSG00000008690	ProperStrand	65	chr4	131908717	131908797	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-2.1839
chr3	68835814	68836671	protein_coding	Smc4	exon	ENSMUSG00000034349	ProperStrand	21	chr9	78328069	78328133	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	2	-13.4819
chr7	64663169	64663186	protein_coding	Gm9962	intron	ENSMUSG00000055048	ProperStrand	1	chr7	150717359	150717425	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-inf
chr4	57706987	57707003	protein_coding	Palm2	intron	ENSMUSG00000090053	NonProperStrand	187	chr5	74489613	74489669	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-1.8079
chr15	82725617	82725636	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	chr15	98350203	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	3	-2.7031
chr11	78118517	78118677	protein_coding	Spag5	exon	ENSMUSG00000002055	ProperStrand	49	chr4	131866171	131866261	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-4.0443
chr2	90235304	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr13	58293260	58293293	protein_coding	Ubqln1	exon	ENSMUSG00000005312	ProperStrand	49	1	-4.8520
chr7	53493835	53493851	protein_coding	Ush1c	utr5	ENSMUSG00000030838	NonProperStrand	62	chr12	110874223	110874291	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	1	-9.9118
chr2	131821592	131821711	protein_coding	Rassf2	utr3	ENSMUSG00000027339	ProperStrand	5	chr16	23110980	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr1	90966956	90966979	Low_complexity	C-rich	Low_complexity	chr1C-rich90966826	NonProperStrand	1	chr2	62198761	62198777	antisense	Gm13561	.	ENSMUSG00000087518	ProperStrand	3	1	-inf
chr5	124170426	124170499	protein_coding	Zcchc8	intron	ENSMUSG00000029427	ProperStrand	13	chr4	131865894	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	7	-inf
chr11	69002198	69002214	protein_coding	Alox8	exon	ENSMUSG00000020891	NonProperStrand	31	chr14	78911487	78911531	protein_coding	Akap11	exon	ENSMUSG00000022016	ProperStrand	44	1	-15.2714
chr11	48616684	48616706	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	chr9	15119287	15119413	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-1.5922
chr3	37750806	37750824	LINE	L1_Mus3	L1	chr3L1_Mus337750762	ProperStrand	38	chr1	89673712	89673763	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-4.1129
chr7	16534823	16534840	protein_coding	Ehd2	utr3	ENSMUSG00000074364	NonProperStrand	197	chr11	69483136	69483268	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	4	-3.7518
chr9	7821078	7821168	protein_coding	Birc2	exon	ENSMUSG00000057367	ProperStrand	12	chr11	69483194	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-9.0896
chr16	93870454	93870471	protein_coding	Morc3	intron	ENSMUSG00000039456	NonProperStrand	33	chr2	139504270	139504288	protein_coding	Ism1	utr5	ENSMUSG00000074766	ProperStrand	8	1	-17.9208
chrX	147709505	147738648	pseudogene	Wnk3-ps	.	ENSMUSG00000041245	ProperStrand	21	chr9	15119709	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-11.0610
chr1	119518570	119518660	LINE	L1Md_F2	L1	chr1L1Md_F2119512515	ProperStrand	1	chr1	119518903	119518983	LINE	Lx3B	L1	chr1Lx3B119518722	ProperStrand	1	1	-inf
chr9	56775853	56775870	protein_coding	Snx33	utr5	ENSMUSG00000032733	NonProperStrand	116	chr2	130101245	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-5.2977
chr18	12889376	12889397	protein_coding	Ttc39c	intron	ENSMUSG00000024424	NonProperStrand	2	chr1	162965531	162965587	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-10.5602
chr11	51551206	51551306	protein_coding	Sec24a	intron	ENSMUSG00000036391	ProperStrand	42	chr5	116013313	116013334	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	1	-10.8677
chr5	104735049	104738296	protein_coding	Ibsp	exon	ENSMUSG00000029306	ProperStrand	15	chr2	130102035	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-8.1310
chrX	156570133	156570159	protein_coding	Pdha1	exon	ENSMUSG00000031299	ProperStrand	27	chr4	131908351	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.7097
chr8	86463490	86463544	protein_coding	Lphn1	utr3	ENSMUSG00000013033	ProperStrand	221	chr1	153208726	153208743	protein_coding	Ivns1abp	exon	ENSMUSG00000023150	ProperStrand	51	1	-11.0263
chr11	102294590	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr2	138188029	138188045	protein_coding	Btbd3	intron	ENSMUSG00000062098	NonProperStrand	121	1	-7.4935
chr7	118214190	118214208	protein_coding	Eif4g2	utr3	ENSMUSG00000005610	NonProperStrand	30	chr4	131865855	131865973	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.9337
chr13	44964955	44965045	protein_coding	Jarid2	intron	ENSMUSG00000038518	ProperStrand	372	chr7	112892660	112892700	protein_coding	Taf10	exon	ENSMUSG00000043866	NonProperStrand	1	1	-inf
chr11	100338283	100338343	protein_coding	Acly	utr3	ENSMUSG00000020917	ProperStrand	183	chr17	45202567	45202585	protein_coding	Supt3h	intron	ENSMUSG00000038954	NonProperStrand	2	1	-19.1102
chr13	13556251	13557581	protein_coding	Nid1	exon	ENSMUSG00000005397	ProperStrand	112	chr5	112795919	112797983	protein_coding	Hps4	exon	ENSMUSG00000042328	ProperStrand	27	1	-13.6786
chr4	116875149	116875249	snRNA	ENSMUSG00000070228_U5	.	ENSMUSG00000070228	ProperStrand	131	chr2	144087324	144087384	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-5.0177
chr6	29420309	29420328	protein_coding	Atp6v1f	utr3	ENSMUSG00000004285	ProperStrand	9	chr11	87862173	87862616	protein_coding	Srsf1	exon	ENSMUSG00000018379	ProperStrand	49	1	-17.5984
chr5	144063403	144063462	protein_coding	E130309D02Rik	utr3	ENSMUSG00000039244	ProperStrand	12	chr17	35299507	35299607	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-7.9938
chr12	106269284	106269335	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	chr14	52829496	52829569	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	5	-3.2337
chr2	121892132	121892149	protein_coding	Spg11	exon	ENSMUSG00000033396	NonProperStrand	5	chr8	32260386	32260425	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-9.7163
chr5	118452146	118458083	protein_coding	Fbxo21	exon	ENSMUSG00000032898	ProperStrand	34	chr10	30530983	30531020	tRNA	tRNA81-GluCTC	.	864438	ProperStrand	154	1	-12.5687
chr12	119370530	119370548	protein_coding	Dnahc11	intron	ENSMUSG00000018581	NonProperStrand	10	chr11	33059989	33060393	protein_coding	Npm1	exon	ENSMUSG00000057113	ProperStrand	352	1	-13.4356
chr2	89368462	89368478	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	chr16	38158094	38158226	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	1	-5.7316
chr9	96626627	96626667	protein_coding	Zbtb38	intron	ENSMUSG00000040433	NonProperStrand	2	chr11	69481382	69481432	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-10.4764
chr14	66182143	66182201	protein_coding	Elp3	exon	ENSMUSG00000022031	ProperStrand	71	chr15	5068462	5068478	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-5.7362
chr11	97079922	97084272	protein_coding	Npepps	exon	ENSMUSG00000001441	ProperStrand	30	chr11	6428088	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	4	-14.4147
chr17	56444615	56448894	protein_coding	Uhrf1	exon	ENSMUSG00000001228	ProperStrand	229	chr9	120038627	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	4	-4.4719
chr5	66651465	66651481	protein_coding	Nsun7	utr5	ENSMUSG00000029206	NonProperStrand	73	chr5	108336363	108336406	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-4.5042
chr17	3632368	3632390	SINE	B4A	B4	chr17B4A3632325	NonProperStrand	4	chr18	35716808	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-7.5042
chr11	120209314	120209410	protein_coding	Actg1	utr5	ENSMUSG00000062825	ProperStrand	178	chr19	8798514	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-3.1660
chr14	22483888	22483918	protein_coding	Myst4	exon	ENSMUSG00000021767	ProperStrand	151	chr16	23111701	23111753	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-1.3985
chr5	31173882	31174113	protein_coding	Tmem214	exon	ENSMUSG00000038828	ProperStrand	9	chr16	23111429	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.5836
chr17	5339209	5339226	protein_coding	Arid1b	intron	ENSMUSG00000069729	NonProperStrand	22	chr19	8799020	8799064	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-7.8356
chr8	89325278	89325368	SINE	PB1D10	Alu	chr8PB1D1089325258	ProperStrand	1	chr8	96504839	96504929	protein_coding	Amfr	intron	ENSMUSG00000031751	ProperStrand	26	1	-inf
chr6	45965480	46120177	protein_coding	Cntnap2	exon	ENSMUSG00000039419	NonProperStrand	283	chr11	62416600	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-4.1122
chr11	116535914	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr2	166890502	166890556	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-0.9330
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr9	15119369	15119426	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	6	-4.4333
chr4	86222007	86222029	protein_coding	Rraga	exon	ENSMUSG00000070934	NonProperStrand	4	chr5	108334222	108334331	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	NonProperStrand	17	2	-inf
chr7	88489822	88490090	protein_coding	Rps17	exon	ENSMUSG00000061787	ProperStrand	105	chr18	35716849	35716883	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	5	-7.4649
chr19	10059324	10059372	protein_coding	Fth1	exon	ENSMUSG00000024661	NonProperStrand	3	chr18	35716785	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	NonProperStrand	45	2	-inf
chr2	177918420	177918438	protein_coding	Phactr3	intron	ENSMUSG00000027525	ProperStrand	6	chr15	5068428	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-10.7955
chr2	90235308	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr12	117726694	117726719	protein_coding	Ptprn2	intron	ENSMUSG00000056553	NonProperStrand	38	1	-5.3470
chr2	30248324	30248340	protein_coding	Dolpp1	intron	ENSMUSG00000026856	ProperStrand	13	chr8	73998449	73998490	protein_coding	Dda1	exon	ENSMUSG00000074247	ProperStrand	11	1	-19.3750
chr1	89840033	89840118	protein_coding	Dgkd	utr3	ENSMUSG00000070738	ProperStrand	39	chr7	105963946	105963979	tRNA	tRNA441-ProTGG	.	84084	ProperStrand	6	1	-18.2987
chr14	63757928	63760609	protein_coding	Ctsb	exon	ENSMUSG00000021939	ProperStrand	48	chr16	23111691	23111781	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-6.1260
chr6	125127407	125127465	protein_coding	Ncapd2	exon	ENSMUSG00000038252	ProperStrand	170	chr16	23110459	23110549	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	4	-4.3477
chr13	38064360	38064376	protein_coding	Ssr1	utr3	ENSMUSG00000021427	ProperStrand	65	chr7	117166781	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-4.6620
chr2	72931147	72931243	protein_coding	Ola1	utr3	ENSMUSG00000027108	ProperStrand	17	chr6	64033340	64033358	protein_coding	Grid2	intron	ENSMUSG00000071424	ProperStrand	20	1	-18.0926
chr11	120439442	120439518	protein_coding	Arhgdia	utr3	ENSMUSG00000025132	ProperStrand	39	chr8	70216865	70216882	protein_coding	Psd3	utr3	ENSMUSG00000030465	ProperStrand	19	2	-19.0595
chr6	119028204	119028221	protein_coding	Cacna1c	intron	ENSMUSG00000051331	NonProperStrand	49	chr4	122970392	122970449	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-7.8193
chr1	9675170	9675270	protein_coding	Mybl1	intron	ENSMUSG00000025912	ProperStrand	10	chr18	33954880	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-7.0296
chr7	118219584	118219609	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	chr17	84261350	84261379	tRNA	tRNA516-IleTAT	.	643566	ProperStrand	12	1	-7.3600
chr11	6519852	6519942	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	chr15	79908939	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-0.8961
chr11	97889197	97889221	protein_coding	Rpl19	exon	ENSMUSG00000017404	ProperStrand	120	chr1	162968212	162968289	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-5.4536
chr14	41269091	41269178	LTR	RLTR9E	ERVK	chr14RLTR9E41269050	ProperStrand	3	mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	3	-inf
chr6	119900288	119900576	protein_coding	Wnk1	exon	ENSMUSG00000045962	ProperStrand	221	chr9	15119647	15119727	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-0.7279
chr10	41644311	41644329	protein_coding	Armc2	exon	ENSMUSG00000071324	ProperStrand	281	chr8	73419657	73419712	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-0.7768
chr6	51417291	51419701	protein_coding	Hnrnpa2b1	utr5	ENSMUSG00000004980	ProperStrand	166	chr13	76341035	76341055	protein_coding	Fam81b	intron	ENSMUSG00000078966	NonProperStrand	220	1	-8.6697
chr10	127152705	127152721	protein_coding	Myo1a	exon	ENSMUSG00000025401	ProperStrand	93	chr15	34370631	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-2.7605
chr2	162144375	162144396	protein_coding	Ptprt	intron	ENSMUSG00000053141	ProperStrand	28	chr17	35089184	35089237	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-6.9955
chr2	25124543	25124681	protein_coding	Tprn	exon	ENSMUSG00000048707	ProperStrand	18	chr18	33954849	33954939	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-5.8297
chr11	6428060	6428171	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr7	117166720	117166859	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	23	-0.7710
chr12	109460710	109460726	protein_coding	Ccdc85c	intron	ENSMUSG00000084883	ProperStrand	157	chr7	116663713	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-2.0608
chr8	112576416	112576432	LINE	L1_Mus3	L1	chr8L1_Mus3112576213	ProperStrand	24	chr1	181476980	181476996	protein_coding	Cnst	intron	ENSMUSG00000038949	ProperStrand	40	1	-16.0159
chr11	85003105	85003146	protein_coding	Appbp2	utr3	ENSMUSG00000018481	ProperStrand	15	chr19	8963027	8963065	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.8348
chr1	63225936	63226036	protein_coding	Eef1b2	exon	ENSMUSG00000025967	ProperStrand	106	chr18	74938044	74938141	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	ProperStrand	1022	3	-14.8353
chr2	24825186	24827046	protein_coding	Wdr85	exon	ENSMUSG00000026975	ProperStrand	323	chr5	143665391	143665409	protein_coding	Actb	utr3	ENSMUSG00000029580	ProperStrand	446	1	-5.9561
chr16	91681519	91681536	protein_coding	Donson	exon	ENSMUSG00000022960	NonProperStrand	1	chr5	108336363	108336460	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-inf
chr4	129067048	129067138	SINE	B1_Mur4	Alu	chr4B1_Mur4129067005	NonProperStrand	1	chr4	129066837	129066927	SINE	B3	B2	chr4B3129066807	ProperStrand	1	1	-inf
chr7	116674908	116674926	protein_coding	St5	intron	ENSMUSG00000031024	ProperStrand	42	chr9	120038552	120038578	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.6915
chr4	122968610	122968710	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	chr11	48616661	48616706	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	1	-2.5608
chr2	150721626	150721688	protein_coding	Abhd12	intron	ENSMUSG00000032046	ProperStrand	38	chr10	79620157	79620247	protein_coding	Midn	utr3	ENSMUSG00000035621	ProperStrand	36	1	-15.2653
chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	chr11	77996603	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-2.5183
chr1	31086058	31086148	LTR	MTD	MaLR	chr1MTD31086081	NonProperStrand	1	chr7	116493847	116493927	protein_coding	Stk33	intron	ENSMUSG00000031027	NonProperStrand	3	1	-inf
chr2	29798211	29798247	protein_coding	Gle1	exon	ENSMUSG00000019715	ProperStrand	16	chr18	35716835	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-7.6909
mmu-miR-6240	2	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr11	58682398	58682415	protein_coding	2810021J22Rik	utr5	ENSMUSG00000020491	ProperStrand	162	1	-3.9920
chr1	24620984	24621031	protein_coding	Gm10925	utr3	ENSMUSG00000090378	ProperStrand	320	chr11	62416623	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-3.7924
chr8	44270757	44272946	protein_coding	Triml2	exon	ENSMUSG00000091490	ProperStrand	32	chr16	23110892	23110982	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.9664
chr11	118900007	118900025	protein_coding	Cbx8	exon	ENSMUSG00000025578	ProperStrand	95	chr11	97642952	97643081	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.7248
chr5	145532202	145532247	protein_coding	Trrap	intron	ENSMUSG00000045482	ProperStrand	399	chr19	8798740	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	5	-8.0173
chr2	145076805	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	chr4	138921550	138922357	protein_coding	C230096C10Rik	exon	ENSMUSG00000078517	ProperStrand	69	1	-7.4447
chr3	135621682	135621762	Simple_repeat	(CA)n	Simple_repeat	chr3(CA)n135621689	NonProperStrand	1	chr14	34781033	34781123	protein_coding	Zfp488	utr3	ENSMUSG00000044519	ProperStrand	54	1	-inf
chr17	35971894	35971928	protein_coding	Tubb5	utr3	ENSMUSG00000001525	ProperStrand	624	chr7	129072802	129074060	protein_coding	Cog7	exon	ENSMUSG00000034951	ProperStrand	29	1	-10.0937
chr4	88369960	88369977	SINE	B3	B2	chr4B388369920	NonProperStrand	22	chr4	131908810	131908870	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.8292
chr19	34309873	34309896	protein_coding-noncoding	Stambpl1	utr5	ENSMUSG00000024776	NonProperStrand	4	chr16	23110919	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-inf
chr17	39980044	39980080	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr17	75790277	75790293	protein_coding	Ltbp1	utr3	ENSMUSG00000001870	NonProperStrand	66	1	-7.0336
chr13	55313311	55314615	protein_coding	Nsd1	utr5	ENSMUSG00000021488	ProperStrand	186	chr16	22009785	22011589	protein_coding	Senp2	exon	ENSMUSG00000022855	ProperStrand	13	1	-14.1682
chr17	35989566	35989582	protein_coding	Mdc1	exon	ENSMUSG00000061607	NonProperStrand	11	chr11	6428089	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-6.4917
chrX	152009278	152009294	protein_coding	Ptchd1	exon	ENSMUSG00000041552	NonProperStrand	294	chr5	143648507	143648546	protein_coding	Fbxl18	exon	ENSMUSG00000066640	ProperStrand	64	1	-9.9984
chr14	37934741	37934757	protein_coding	Ghitm	utr3	ENSMUSG00000041028	NonProperStrand	11	chr7	51505830	51505909	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	4	-19.5469
chr2	24206269	24206297	protein_coding	Il1rn	utr3	ENSMUSG00000026981	NonProperStrand	1	chr15	99070172	99070188	protein_coding	Kcnh3	exon	ENSMUSG00000037579	NonProperStrand	44	1	-inf
chr9	21870161	21870239	protein_coding	Zfp653	exon	ENSMUSG00000038895	ProperStrand	3	chr14	56159294	56159312	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	3	-inf
chr19	44188377	44188477	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr6	97112810	97112879	snoRNA	ENSMUSG00000065728_SNORA36	.	ENSMUSG00000065728	ProperStrand	158	1	-5.8798
chr3	108228259	108228275	protein_coding	Sars	utr3	ENSMUSG00000068739	NonProperStrand	200	chr19	8798484	8798519	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-5.1089
chr6	99284900	99284920	protein_coding	Eif4e3	intron	ENSMUSG00000030068	NonProperStrand	15	chr15	34370545	34370665	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-6.2440
chr7	51850999	51851015	protein_coding	Kcnc3	exon	ENSMUSG00000062785	NonProperStrand	7	chr19	8799859	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-9.3077
chr2	155171395	155183038	protein_coding	Pigu	exon	ENSMUSG00000038383	ProperStrand	14	chr1	72272872	72272952	snRNA	ENSMUSG00000075752_U2	.	ENSMUSG00000075752	ProperStrand	535	1	-11.8943
chr1	58072709	58072755	protein_coding	Sgol2	exon	ENSMUSG00000026039	ProperStrand	36	chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	1	-10.5185
chr1	137340356	137340403	protein_coding	Nav1	exon	ENSMUSG00000009418	ProperStrand	38	chr8	98270016	98270093	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	2	-10.4421
chr10	42839335	42839353	protein_coding	Sobp	intron	ENSMUSG00000038248	NonProperStrand	25	chr1	162966831	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-8.0092
chrX	72636055	72636145	protein_coding	Fundc2	intron	ENSMUSG00000031198	ProperStrand	16	chr11	69481353	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	12	-inf
chr10	79316213	79316230	lincRNA	E130317F20Rik	exon	ENSMUSG00000091994	NonProperStrand	97	chr1	145626057	145626172	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-7.8689
chr1	133744558	133744587	protein_coding	Slc41a1	utr3	ENSMUSG00000013275	ProperStrand	19	chr18	35714252	35714292	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-5.6546
chr2	84532497	84532514	protein_coding	Zdhhc5	exon	ENSMUSG00000034075	ProperStrand	20	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-11.1511
chr16	14192190	14192280	protein_coding	Nde1	utr3	ENSMUSG00000022678	ProperStrand	23	chr16	23110460	23110540	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.2122
chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	8	-3.8296
chr1	93827440	93827530	protein_coding	Hdac4	utr5	ENSMUSG00000073617	ProperStrand	5	chr13	96100551	96100641	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	2	-19.1833
chr18	46765280	46767751	protein_coding	Eif1a	exon	ENSMUSG00000057561	ProperStrand	44	chr16	23110829	23111010	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	9	-11.5806
chr11	23794838	23794855	antisense	Gm12061	.	ENSMUSG00000084769	ProperStrand	18	chr1	155303724	155303769	protein_coding	Dhx9	exon	ENSMUSG00000042699	ProperStrand	98	1	-14.7705
chr9	59527000	59527044	protein_coding	Pkm2	utr3	ENSMUSG00000032294	ProperStrand	1296	chr7	25344822	25344866	protein_coding	Xrcc1	exon	ENSMUSG00000051768	ProperStrand	8	1	-11.3016
chr7	136800631	136800649	SINE	RSINE1	B4	chr7RSINE1136800606	ProperStrand	216	chr1	162966813	162966846	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-3.7938
chr3	30995818	30995855	protein_coding	Skil	utr5	ENSMUSG00000027660	ProperStrand	23	chr16	23110471	23110580	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-7.0912
chr14	20630815	20630915	protein_coding	Nid2	utr3	ENSMUSG00000021806	ProperStrand	372	chr17	45708460	45708497	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	2	-5.5379
chr18	44551188	44551278	protein_coding	Dcp2	intron	ENSMUSG00000024472	ProperStrand	44	chr17	35299519	35299599	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-5.3796
chr4	80920497	80920587	DNA	MER113	MER1_type	chr4MER11380920518	NonProperStrand	1	chr4	80920749	80920839	LTR	MTC	MaLR	chr4MTC80920599	ProperStrand	1	1	-inf
chr11	116619032	116619057	antisense	BC018473	.	ENSMUSG00000056032	ProperStrand	48	chr19	8787916	8788016	protein_coding	Slc3a2	exon	ENSMUSG00000010095	ProperStrand	63	5	-21.0752
chr2	157291676	157297245	protein_coding	Src	utr3	ENSMUSG00000027646	ProperStrand	32	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-3.1962
chr1	164606943	164607545	protein_coding	Prrc2c	exon	ENSMUSG00000040225	ProperStrand	413	chr5	121655101	121655154	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-0.7263
chr3	116475368	116475701	protein_coding	Agl	exon	ENSMUSG00000033400	ProperStrand	18	chr5	74489595	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	9	-19.6277
chr11	116699446	116699502	protein_coding-noncoding	Jmjd6	utr3	ENSMUSG00000056962	ProperStrand	1	chr17	24857780	24857852	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-inf
chr17	35151656	35151682	protein_coding	Vars	exon	ENSMUSG00000007029	ProperStrand	121	chr11	77995189	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-4.8158
chr7	52475853	52488255	protein_coding	Tead2	exon	ENSMUSG00000030796	ProperStrand	39	chr18	35716756	35716886	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	8	-19.7009
chr4	22415358	22415374	protein_coding	Pou3f2	utr5	ENSMUSG00000052621	ProperStrand	13	chr15	34370661	34370678	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-6.5354
chr16	33947905	33947921	protein_coding	Itgb5	exon	ENSMUSG00000022817	NonProperStrand	17	chrX	156315497	156315519	protein_coding	Sh3kbp1	intron	ENSMUSG00000040990	ProperStrand	67	1	-15.6289
chr7	38354919	38354935	protein_coding	Zfp536	exon	ENSMUSG00000043456	NonProperStrand	236	chr4	116827120	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-4.3716
chr9	78023109	78023147	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr1	174436765	174436870	protein_coding	Tagln2	utr3	ENSMUSG00000026547	ProperStrand	39	1	-6.7306
chr19	56623205	56623222	protein_coding	Nhlrc2	exon	ENSMUSG00000025078	NonProperStrand	3	chr15	34370545	34370623	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-16.3344
chr19	5567999	5568026	Simple_repeat	(CCCCG)n	Simple_repeat	chr19(CCCCG)n5567945	ProperStrand	1	chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	1	-inf
chr6	83318070	83318086	protein_coding	Tet3	exon	ENSMUSG00000034832	NonProperStrand	93	chr12	17553031	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-4.2488
chr11	3879055	3879102	protein_coding	Pes1	utr3	ENSMUSG00000020430	ProperStrand	49	chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	1	-8.9995
chr9	94437767	94437784	protein_coding	1190002N15Rik	exon	ENSMUSG00000045414	NonProperStrand	11	chr4	116827121	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-10.4884
chr9	96101512	96101602	protein_coding	Tfdp2	intron	ENSMUSG00000032411	ProperStrand	95	chr8	98269967	98270047	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-4.6516
chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	chr1	59761635	59761715	snoRNA	ENSMUSG00000089093_Snord11	.	ENSMUSG00000089093	ProperStrand	193	7	-13.0270
chr12	88614430	88614612	protein_coding	Ahsa1	exon	ENSMUSG00000021037	ProperStrand	58	chr7	116664794	116664874	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.6073
chr11	58802145	58802226	protein_coding	Trim11	intron	ENSMUSG00000020455	ProperStrand	43	chr11	68916733	68916750	protein_coding	Per1	exon	ENSMUSG00000020893	NonProperStrand	3	1	-inf
chr2	165877894	165877949	protein_coding	Ncoa3	exon	ENSMUSG00000027678	ProperStrand	58	chrX	34622906	34622990	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	3	-8.1617
chr4	24526672	24526696	protein_coding-noncoding	Mms22l	utr3	ENSMUSG00000045751	ProperStrand	5	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	5	-inf
chr2	22444580	22444629	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	chr10	39978324	39978388	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-0.7917
chr7	4960662	4960762	protein_coding	Fiz1	exon	ENSMUSG00000061374	ProperStrand	37	chr4	49288465	49288482	protein_coding	E130309F12Rik	intron	ENSMUSG00000063446	ProperStrand	10	1	-17.6667
chr12	11847231	11847321	LINE	L3	CR1	chr12L311847257	ProperStrand	1	chr7	34400670	34400750	pseudogene	Gm12772	.	ENSMUSG00000079892	NonProperStrand	1	1	-inf
chr13	98263570	98263620	lincRNA	Gm11019	intron	ENSMUSG00000078952	ProperStrand	113	chr7	17581880	17581960	protein_coding	Ccdc8	exon	ENSMUSG00000041117	ProperStrand	7	1	-16.5385
chr17	39985206	39985652	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr11	98878344	98878463	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	2	-0.7513
chr13	51743579	51743630	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	chr1	74863360	74863394	tRNA	tRNA1392-GlyGCC	.	308717	ProperStrand	10	3	-21.8384
chr4	53873602	53873647	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	chr17	35299507	35299607	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	2	-2.2047
chr1	187198027	187223186	protein_coding	Eprs	exon	ENSMUSG00000026615	ProperStrand	149	chr16	23111758	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	9	-11.5742
chr5	115900277	115900843	protein_coding	Msi1	exon	ENSMUSG00000054256	ProperStrand	12	chr4	57706987	57707003	protein_coding	Palm2	intron	ENSMUSG00000090053	NonProperStrand	187	1	-14.3257
chr14	26478171	26478188	protein_coding	Zmiz1	intron	ENSMUSG00000007817	ProperStrand	34	chr18	73693171	73693189	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-6.6464
chr9	120859714	120859787	protein_coding	Ctnnb1	exon	ENSMUSG00000006932	ProperStrand	214	chr1	89681353	89681396	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-3.0482
chr4	41062029	41062080	protein_coding	Nol6	utr3	ENSMUSG00000028430	ProperStrand	98	chr19	8800375	8800453	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	4	-9.4067
chr11	20605763	20605856	protein_coding	Aftph	intron	ENSMUSG00000049659	ProperStrand	9	chr19	8798517	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-9.0452
chr16	20637868	20637885	protein_coding	Ece2	exon	ENSMUSG00000022842	ProperStrand	25	chr8	13416896	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-8.2068
chr16	87719894	87720003	protein_coding	Bach1	exon	ENSMUSG00000025612	ProperStrand	32	chr2	101537325	101537341	protein_coding	Traf6	exon	ENSMUSG00000027164	ProperStrand	24	1	-16.4313
chr5	136385199	136385292	protein_coding	Ywhag	utr3	ENSMUSG00000051391	ProperStrand	142	chr11	62590603	62590631	snoRNA	ENSMUSG00000064692_SNORA67	.	ENSMUSG00000064692	ProperStrand	185	2	-14.7529
chr8	14900340	14900428	protein_coding	Cln8	utr3	ENSMUSG00000026317	ProperStrand	5	chr2	145076805	145209251	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-12.8805
chr17	24367301	24368264	protein_coding	Ccnf	exon	ENSMUSG00000072082	ProperStrand	149	chr2	153050783	153050799	protein_coding	Tspyl3	exon	ENSMUSG00000074671	ProperStrand	228	1	-8.8139
chr17	79334292	79334372	protein_coding	Cebpz	exon	ENSMUSG00000024081	ProperStrand	14	chr7	29136613	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.0758
chr5	103854542	103854558	protein_coding	Ptpn13	utr5	ENSMUSG00000034573	NonProperStrand	74	chr17	23955820	23955836	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	1	-11.0527
chr13	49757758	49757776	protein_coding	Nol8	exon	ENSMUSG00000021392	ProperStrand	39	chr11	97642964	97643090	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	5	-14.1622
chr19	8946370	8946508	protein_coding	Ubxn1	exon	ENSMUSG00000071655	ProperStrand	68	chr1	162965531	162965596	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.0504
chr7	24889814	24889847	protein_coding	Zfp180	exon	ENSMUSG00000057101	ProperStrand	14	chr4	131908689	131908797	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-9.3034
chr14	15572355	15572371	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr5	148113281	148113297	protein_coding	Cdx2	utr3	ENSMUSG00000029646	ProperStrand	276	1	-8.2303
chr5	36957162	36957263	protein_coding	D5Ertd579e	exon	ENSMUSG00000029190	ProperStrand	43	chr8	125626953	125627005	snoRNA	ENSMUSG00000064450_Snord68	.	ENSMUSG00000064450	ProperStrand	181	1	-11.7709
chr1	37476041	37476121	protein_coding	6330578E17Rik	utr3	ENSMUSG00000026112	ProperStrand	14	chr19	8963027	8963117	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.9719
chr17	57167243	57167407	protein_coding	Khsrp	exon	ENSMUSG00000007670	ProperStrand	353	chr2	37502726	37502742	protein_coding	Strbp	utr5	ENSMUSG00000026915	ProperStrand	90	1	-8.9501
chr4	123342107	123342145	protein_coding	Macf1	intron	ENSMUSG00000028649	ProperStrand	320	chr15	78504284	78504301	protein_coding	Elfn2	exon	ENSMUSG00000043460	NonProperStrand	20	1	-12.1855
chr4	131865855	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr8	112363233	112363274	snoRNA	ENSMUSG00000077549_Snord71	.	ENSMUSG00000077549	ProperStrand	196	2	-0.8233
chr4	8769991	8770009	protein_coding	Chd7	intron	ENSMUSG00000041235	NonProperStrand	45	chr19	8963027	8963082	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-4.8387
chr16	75758193	75758209	protein_coding	Hspa13	exon	ENSMUSG00000032932	NonProperStrand	57	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-7.8420
chr5	136600479	136600545	protein_coding-noncoding	Lrwd1	utr3	ENSMUSG00000029703	ProperStrand	2	chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	1	-16.8036
chr17	12403174	12403221	protein_coding	Agpat4	exon	ENSMUSG00000023827	ProperStrand	15	chr18	75783605	75783623	protein_coding	Ctif	intron	ENSMUSG00000052928	ProperStrand	41	1	-17.0088
mmu-miR-6238	1	22	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr17	46798799	46798887	protein_coding	Cul7	exon	ENSMUSG00000038545	ProperStrand	38	1	-11.4553
chr2	90235296	90235325	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	132867629	132867673	protein_coding	Wdtc1	intron	ENSMUSG00000037622	ProperStrand	81	1	-3.8951
chr4	138452756	138452774	protein_coding	Otud3	exon	ENSMUSG00000041161	NonProperStrand	5	chr16	23110827	23110893	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-7.3377
chr13	22098354	22098371	protein_coding	Prss16	intron	ENSMUSG00000006179	ProperStrand	78	chr11	69481432	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-4.7713
chr2	127416779	127416901	protein_coding	Mrps5	intron	ENSMUSG00000027374	ProperStrand	84	chr7	30029634	30029659	protein_coding	Yif1b	exon	ENSMUSG00000030588	ProperStrand	154	1	-10.7453
chr13	34436391	34436407	protein_coding	Slc22a23	utr5	ENSMUSG00000038267	NonProperStrand	21	chr2	166890503	166890561	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-9.6748
chr9	102622996	102623096	protein_coding	Amotl2	exon	ENSMUSG00000032531	ProperStrand	54	chr1	89673744	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-3.4559
chrX	86663121	86663140	LTR	MLT1D	MaLR	chrXMLT1D86663090	ProperStrand	4	chr16	23110829	23110874	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.6489
chr6	3794653	3794670	SINE	B4A	B4	chr6B4A3794525	NonProperStrand	26	chr11	97641452	97641569	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	1	-9.5409
chr15	101919785	101919845	protein_coding	Eif4b	intron	ENSMUSG00000058655	ProperStrand	484	chr14	24251850	24251866	protein_coding	Kcnma1	intron	ENSMUSG00000063142	NonProperStrand	104	1	-8.0336
chr7	150293597	150293613	protein_coding	Kcnq1	exon	ENSMUSG00000009545	NonProperStrand	133	chr17	84785927	84792812	protein_coding	Thada	exon	ENSMUSG00000024251	ProperStrand	47	1	-12.2087
chr9	109021473	109021489	protein_coding	Plxnb1	utr3	ENSMUSG00000053646	ProperStrand	25	chr11	6428060	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.8448
chr1	46132805	46132831	protein_coding	Dnahc7b	intron	ENSMUSG00000041144	NonProperStrand	57	chr17	35087894	35087943	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	3	-12.4082
chr7	31663114	31664217	protein_coding	Cd22	utr5	ENSMUSG00000030577	NonProperStrand	128	chr4	131865391	131865460	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-2.6294
chr5	143874599	143874615	protein_coding	Rnf216	utr5	ENSMUSG00000045078	NonProperStrand	29	chr16	23110890	23111453	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.1645
chr18	78017507	78017607	protein_coding	Atp5a1	exon	ENSMUSG00000025428	ProperStrand	254	chr9	44121865	44121996	protein_coding	C2cd2l	exon	ENSMUSG00000032120	ProperStrand	8	1	-14.5490
chr15	89133412	89133512	protein_coding	Sbf1	exon	ENSMUSG00000036529	ProperStrand	85	chr7	29583731	29583779	protein_coding	Rinl	utr3	ENSMUSG00000051735	ProperStrand	10	1	-16.2428
chr9	110282154	110282234	protein_coding	Scap	exon	ENSMUSG00000032485	ProperStrand	37	chr9	65044376	65044466	snRNA	ENSMUSG00000075763_U5	.	ENSMUSG00000075763	ProperStrand	216	1	-11.7200
chr9	108433486	108433586	protein_coding	Qrich1	intron	ENSMUSG00000006673	ProperStrand	30	chr16	23110933	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0481
chr17	83800978	83801011	protein_coding	Eml4	intron	ENSMUSG00000032624	ProperStrand	50	chr10	23505152	23505204	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.4914
chr13	23626064	23626136	protein_coding	Hist1h2af	exon	ENSMUSG00000061991	ProperStrand	7	chr1	89673664	89673754	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-7.5185
chrX	156566468	156567353	protein_coding	Pdha1	exon	ENSMUSG00000031299	ProperStrand	27	chr18	35716771	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.5820
chr7	28146782	28146798	protein_coding	Spnb4	exon	ENSMUSG00000011751	NonProperStrand	84	chr19	38869531	38869547	protein_coding	Noc3l	exon	ENSMUSG00000024999	NonProperStrand	149	1	-10.8115
chr19	3421098	3421147	SINE	B2_Mm2	B2	chr19B2_Mm23421044	NonProperStrand	3	chr17	24665441	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	3	-inf
chr4	11849262	11849281	LINE	Lx8	L1	chr4Lx811849111	NonProperStrand	12	chr6	51414208	51414269	protein_coding	Hnrnpa2b1	intron	ENSMUSG00000004980	ProperStrand	166	1	-14.5637
chr12	88778746	88778772	protein_coding	Alkbh1	intron	ENSMUSG00000079036	ProperStrand	70	chr5	147646411	147646477	snoRNA	ENSMUSG00000077185_SNORD102	.	ENSMUSG00000077185	ProperStrand	142	2	-17.8694
chr13	6587780	6587806	protein_coding	Pfkp	exon	ENSMUSG00000021196	ProperStrand	197	chr11	79950546	79950563	protein_coding	1110002N22Rik	utr3	ENSMUSG00000046909	ProperStrand	45	1	-11.5084
chr19	7110168	7114442	protein_coding	Stip1	utr5	ENSMUSG00000024966	ProperStrand	100	chr15	79913288	79913346	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-4.6756
chr18	80403573	80403589	protein_coding	Txnl4a	utr5	ENSMUSG00000057130	ProperStrand	44	chr19	8963153	8963178	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.8083
chr17	35643292	35643392	protein_coding	Pou5f1	exon	ENSMUSG00000024406	ProperStrand	104	chr9	15118548	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	1	-8.2411
chr2	35419880	35419897	protein_coding	Dab2ip	intron	ENSMUSG00000026883	NonProperStrand	58	chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-6.5213
chr16	23110455	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	chr7	134671399	134671505	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	12	-3.2658
chr11	115626798	115638592	protein_coding	2310067B10Rik	utr5	ENSMUSG00000020747	ProperStrand	74	chrX	152009278	152009294	protein_coding	Ptchd1	exon	ENSMUSG00000041552	NonProperStrand	294	1	-9.7070
chr10	9571856	9571946	snoRNA	ENSMUSG00000064609_SNORA36	.	ENSMUSG00000064609	ProperStrand	35	chr9	120039533	120039610	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-4.3274
chr9	40611086	40611176	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr15	100049624	100049663	protein_coding	Dip2b	utr3	ENSMUSG00000023026	ProperStrand	48	1	-8.5862
chr15	102147127	102147227	protein_coding	Espl1	exon	ENSMUSG00000058290	ProperStrand	172	chr7	148634722	148634837	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	45	-inf
chr15	101925776	101925876	protein_coding	Eif4b	utr3	ENSMUSG00000058655	ProperStrand	484	chr9	114472413	114472463	protein_coding	Trim71	utr5	ENSMUSG00000079259	ProperStrand	162	1	-7.1533
chr11	95911247	95911312	protein_coding	Ube2z	utr3	ENSMUSG00000014349	ProperStrand	41	chr18	35716825	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.8214
chr1	24621005	24621244	protein_coding	Gm10925	utr3	ENSMUSG00000090378	ProperStrand	320	chr7	116663635	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	7	-5.4671
chr7	52413858	52414032	protein_coding	Pih1d1	exon	ENSMUSG00000003423	ProperStrand	1	chr19	8800372	8800452	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-inf
chr9	104062266	104062356	protein_coding	Dnajc13	intron	ENSMUSG00000032560	ProperStrand	60	chr9	58006823	58006913	protein_coding	Islr	utr5	ENSMUSG00000037206	NonProperStrand	11	1	-16.7349
chr5	74489202	74489288	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr5	34234244	34234262	protein_coding	Whsc1	utr5	ENSMUSG00000057406	ProperStrand	409	1	-2.1010
chr17	26013921	26014001	protein_coding	0610011F06Rik	utr3	ENSMUSG00000025731	ProperStrand	7	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-9.3151
chr12	82047672	82048319	protein_coding	Srsf5	exon	ENSMUSG00000021134	ProperStrand	68	chr6	88433058	88433092	protein_coding	Ruvbl1	exon	ENSMUSG00000030079	ProperStrand	24	2	-19.3535
chr14	67605441	67605541	protein_coding	Bnip3l	utr3	ENSMUSG00000022051	ProperStrand	30	chr2	20731120	20731138	protein_coding	Etl4	utr3	ENSMUSG00000036617	NonProperStrand	23	1	-16.6246
chr16	8660814	8660889	protein_coding	Carhsp1	utr3	ENSMUSG00000008393	ProperStrand	15	chr16	23110829	23110919	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-8.3022
chr16	91227718	91227735	protein_coding	Olig2	utr3	ENSMUSG00000039830	NonProperStrand	78	chr10	23505151	23505259	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-0.8973
chr18	73693109	73693190	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr14	76247716	76247842	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	11	-1.4179
chr15	101117664	101120710	protein_coding	9430023L20Rik	exon	ENSMUSG00000037204	ProperStrand	11	chr16	23110967	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.6241
chr11	113306411	113306436	protein_coding	Slc39a11	intron	ENSMUSG00000041654	ProperStrand	25	chr1	162965573	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.9342
chr14	71015914	71017180	protein_coding	Epb4.9	exon	ENSMUSG00000022099	ProperStrand	48	chr1	88252837	88252873	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-7.0837
chr2	104491875	104492668	protein_coding	Cstf3	exon	ENSMUSG00000027176	ProperStrand	19	chr11	69481334	69481378	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.3947
chr17	71600697	71600715	lincRNA	Gm16724	intron	ENSMUSG00000085916	NonProperStrand	8	chr2	26768368	26768433	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-9.6968
chr6	86963594	86963694	protein_coding	Nfu1	intron	ENSMUSG00000029993	ProperStrand	12	chr11	77996560	77996578	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-9.3442
chr4	129497506	129497586	protein_coding	Ptp4a2	utr5	ENSMUSG00000028788	ProperStrand	27	chr12	106269338	106269428	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	2	-9.3214
chr1	88248613	88248658	snoRNA	ENSMUSG00000064696_SNORD20	.	ENSMUSG00000064696	ProperStrand	89	chr5	121655016	121655092	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-5.2252
chr3	43216446	43216468	SINE	B4	B4	chr3B443216344	ProperStrand	1	chr19	5719336	5719352	protein_coding	Ehbp1l1	exon	ENSMUSG00000024937	ProperStrand	75	1	-inf
chr5	122009145	122009161	LTR	RMER10B	ERVL	chr5RMER10B122008981	NonProperStrand	44	chr2	63936034	63936053	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-8.4825
chr4	129200327	129201561	protein_coding	Hdac1	exon	ENSMUSG00000028800	ProperStrand	49	chr5	74489587	74489667	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-4.1589
chrX	152009278	152009294	protein_coding	Ptchd1	exon	ENSMUSG00000041552	NonProperStrand	294	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-0.8172
chr10	128004656	128004678	protein_coding	Erbb3	utr3	ENSMUSG00000018166	ProperStrand	49	chr9	121382736	121382754	protein_coding	Trak1	utr3	ENSMUSG00000032536	ProperStrand	152	1	-11.8567
chr11	51813898	51813915	protein_coding	Ube2b	utr5	ENSMUSG00000020390	ProperStrand	57	chr6	113465975	113465991	protein_coding	Tmem111	exon	ENSMUSG00000030286	ProperStrand	10	1	-17.0534
chr17	35299566	35299630	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	chr4	116828379	116828441	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	4	-3.7296
chr1	89095707	89095723	protein_coding	Chrnd	utr3	ENSMUSG00000026251	NonProperStrand	8	chr11	77996559	77996608	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	2	-16.2165
chr2	25299920	25300064	protein_coding	Abca2	exon	ENSMUSG00000026944	ProperStrand	57	chr11	97642952	97643021	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.5597
chr13	23392049	23392066	lincRNA	4930557F10Rik	intron	ENSMUSG00000085488	NonProperStrand	51	chr6	117874512	117874559	protein_coding	Hnrnpf	exon	ENSMUSG00000042079	ProperStrand	147	1	-11.8428
chr9	64025276	64025729	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	chr9	103401280	103401296	protein_coding	Tmem108	exon	ENSMUSG00000042757	NonProperStrand	323	1	-5.3534
chr1	162966203	162966270	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	chr19	8963023	8963185	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	12	-1.7700
chr2	151386751	151387010	protein_coding	Fkbp1a	utr3	ENSMUSG00000032966	ProperStrand	36	chr11	68886943	68887065	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	4	-15.9816
chr15	34370574	34370664	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	chr1	59749360	59749411	snoRNA	ENSMUSG00000077358_SNORD70	.	ENSMUSG00000077358	ProperStrand	63	1	-3.4594
chr10	129297866	129297883	LINE	Lx9	L1	chr10Lx9129297789	ProperStrand	4	chr17	39985370	39985438	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-11.5725
chr9	103258705	103262244	protein_coding	Cdv3	exon	ENSMUSG00000032803	ProperStrand	68	chr6	126075509	126075526	protein_coding	Ntf3	intron	ENSMUSG00000049107	NonProperStrand	38	1	-13.9833
chrX	159228295	159228311	protein_coding	Txlng	utr3	ENSMUSG00000038344	NonProperStrand	5	chr11	98878344	98878466	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-11.4221
chr14	22488615	22488632	protein_coding	Myst4	exon	ENSMUSG00000021767	NonProperStrand	7	chr3	123210878	123210908	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-6.1463
chr8	86447538	86447608	protein_coding	Lphn1	intron	ENSMUSG00000013033	ProperStrand	221	chr17	24857833	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-1.1517
chr6	38275294	38275312	protein_coding	Zc3hav1	exon	ENSMUSG00000029826	ProperStrand	20	chr17	24857730	24857793	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.2966
chr6	125123157	125123454	protein_coding	Ncapd2	exon	ENSMUSG00000038252	ProperStrand	170	chr7	128791124	128791145	protein_coding	Usp31	utr3	ENSMUSG00000063317	ProperStrand	35	1	-12.3124
chr11	51436055	51436646	protein_coding	Nhp2	exon	ENSMUSG00000001056	ProperStrand	32	chr7	117166761	117166841	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	24	-22.9272
chr3	89867156	89868406	protein_coding	1700094D03Rik	exon	ENSMUSG00000078667	ProperStrand	7	chr10	23505162	23505252	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-5.0629
chr15	78873315	78873332	protein_coding	Gcat	exon	ENSMUSG00000006378	ProperStrand	15	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-10.5371
chr1	169167716	169167765	protein_coding	Uck2	exon	ENSMUSG00000026558	ProperStrand	45	chr16	23110855	23110945	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-2.1851
chr7	26057527	26057544	protein_coding	Cic	exon	ENSMUSG00000005442	ProperStrand	80	chr4	131908356	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.0291
chr5	36246979	36247002	protein_coding-noncoding	Afap1	utr5	ENSMUSG00000029094	ProperStrand	1	chr3	123210928	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-inf
chrX	84483704	84483725	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr13	51743580	51743642	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	2	-3.8131
chr2	118611946	118611962	protein_coding	Disp2	exon	ENSMUSG00000040035	NonProperStrand	204	chr11	106362640	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-5.0015
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr18	57514476	57514499	protein_coding	Prrc1	utr5	ENSMUSG00000024594	NonProperStrand	22	1	-10.6339
chr17	15654024	15654062	protein_coding	Tbp	utr3	ENSMUSG00000014767	ProperStrand	8	chr9	15118329	15118377	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-12.1465
chr5	123175316	123175332	protein_coding	P2rx4	exon	ENSMUSG00000029470	ProperStrand	16	chr11	62416598	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-7.8033
chr8	113447139	113447170	protein_coding	St3gal2	intron	ENSMUSG00000031749	ProperStrand	206	chr16	23111739	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-2.4337
chr7	73206213	73206230	protein_coding	Snrpa1	intron	ENSMUSG00000030512	NonProperStrand	6	chr13	96374713	96374729	protein_coding	F2r	exon	ENSMUSG00000048376	NonProperStrand	88	1	-17.2070
chr2	90235294	90235345	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr16	38158092	38158226	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	6	-6.4388
chr13	15732915	15732931	protein_coding	Gli3	exon	ENSMUSG00000021318	ProperStrand	54	chr16	37384897	37384913	protein_coding	Stxbp5l	utr5	ENSMUSG00000022829	ProperStrand	332	1	-10.0973
chr6	52589227	52589315	snoRNA	ENSMUSG00000064792_SNORA32	.	ENSMUSG00000064792	ProperStrand	151	chr13	49779665	49779755	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-5.2010
chrX	166427798	166427846	protein_coding	Mid1	utr3	ENSMUSG00000035299	ProperStrand	209	chr1	89673561	89673651	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-1.2353
chr12	25393298	25393440	protein_coding	Rrm2	exon	ENSMUSG00000020649	ProperStrand	65	chr7	16677707	16678201	protein_coding	Zfp541	exon	ENSMUSG00000078796	ProperStrand	33	1	-14.3569
chr4	132530098	132530117	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	chr5	108334195	108336490	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	2	-2.8965
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr2	60281131	60281148	protein_coding	Pla2r1	intron	ENSMUSG00000054580	NonProperStrand	3	1	-15.3187
chr15	100416584	100416600	protein_coding	Pou6f1	intron	ENSMUSG00000009739	ProperStrand	44	chr7	116663633	116663711	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.0569
chr13	9833569	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr8	44215931	44215979	protein_coding	Triml1	exon	ENSMUSG00000031651	ProperStrand	12	2	-13.1498
chr7	73205792	73205882	protein_coding-noncoding	Snrpa1	utr5	ENSMUSG00000030512	NonProperStrand	1	chr7	73206163	73206243	protein_coding	Snrpa1	intron	ENSMUSG00000030512	NonProperStrand	6	1	-inf
chr17	4082391	4082481	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr5	50145991	50146081	LINE	L1Md_A	L1	chr5L1Md_A50139948	ProperStrand	1	1	-inf
chr11	72021114	72021161	protein_coding	Txndc17	utr5	ENSMUSG00000020803	ProperStrand	7	chr19	8798740	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-9.1562
chr4	132752493	132752529	protein_coding	Wasf2	utr3	ENSMUSG00000028868	ProperStrand	56	chr9	120038576	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.1631
chr1	82663615	82663635	protein_coding	Col4a3	intron	ENSMUSG00000079465	ProperStrand	99	chr12	17552949	17553046	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	3	-9.9935
chr17	56849613	56849644	protein_coding	Ranbp3	exon	ENSMUSG00000002372	ProperStrand	34	chr7	20036905	20036921	protein_coding	Mark4	exon	ENSMUSG00000030397	NonProperStrand	45	1	-15.0234
chrX	147749444	147749460	antisense	Gm15139	.	ENSMUSG00000084771	ProperStrand	11	chr7	4873350	4873450	protein_coding	Zfp628	exon	ENSMUSG00000074406	ProperStrand	12	9	-inf
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr11	101306599	101306757	protein_coding	Rpl27	exon	ENSMUSG00000063316	ProperStrand	96	1	-5.9962
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr15	82003255	82005550	protein_coding	Srebf2	exon	ENSMUSG00000022463	ProperStrand	592	2	-3.7968
chr18	78018649	78018694	protein_coding	Atp5a1	exon	ENSMUSG00000025428	ProperStrand	254	chr5	23825941	23825957	protein_coding	Kcnh2	exon	ENSMUSG00000038319	ProperStrand	242	1	-7.6343
chr19	10680466	10680520	protein_coding	Ddb1	intron	ENSMUSG00000024740	ProperStrand	304	chr14	119028892	119030212	protein_coding	Abcc4	exon	ENSMUSG00000032849	ProperStrand	137	1	-8.4086
chr10	80785724	80785923	protein_coding	2510012J08Rik	exon	ENSMUSG00000034889	ProperStrand	16	chr4	131908687	131908751	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-5.8984
chr10	80542302	80542669	protein_coding	Thop1	exon	ENSMUSG00000004929	ProperStrand	20	chr14	76247758	76247818	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-6.3209
chr18	42734262	42734362	protein_coding	Tcerg1	exon	ENSMUSG00000024498	ProperStrand	210	chr7	116663711	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-0.7089
chr3	145310762	145310783	protein_coding	Cyr61	exon	ENSMUSG00000028195	ProperStrand	13	chr16	23111453	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.8569
chr13	9833560	9833620	LINE	L1Md_T	L1	chr13L1Md_T9831266	NonProperStrand	15	chr17	8566533	8566607	processed_transcript	T2	.	ENSMUSG00000058159	NonProperStrand	1	1	-inf
chr2	153594480	153594497	protein_coding	Mapre1	utr3	ENSMUSG00000027479	NonProperStrand	2	chr14	31827528	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-14.4005
chr9	21602970	21602986	protein_coding	Kank2	utr5	ENSMUSG00000032194	ProperStrand	196	chr11	69483212	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-0.7439
chr14	99700989	99701158	protein_coding	Klf5	exon	ENSMUSG00000005148	ProperStrand	39	chr16	23110986	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.5380
chr11	3426352	3426368	protein_coding	Smtn	exon	ENSMUSG00000020439	ProperStrand	222	chr2	154206653	154206694	protein_coding	Snta1	exon	ENSMUSG00000027488	ProperStrand	7	1	-15.1182
chr18	36202573	36202593	protein_coding	Nrg2	intron	ENSMUSG00000060275	NonProperStrand	7	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.7768
chr15	12592429	12592448	protein_coding	Pdzd2	intron	ENSMUSG00000022197	NonProperStrand	16	chr18	35716762	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-11.1526
chr17	36000485	36000501	protein_coding	Nrm	exon	ENSMUSG00000059791	ProperStrand	253	chr2	130103448	130103502	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-5.2267
chrX	20255852	20256558	protein_coding	Uba1	exon	ENSMUSG00000001924	ProperStrand	156	chr9	15119698	15119729	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.1469
chr13	29043775	29043792	protein_coding	Sox4	exon	ENSMUSG00000076431	ProperStrand	73	chr1	162965536	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-5.0677
chr9	59504423	59513033	protein_coding	Pkm2	utr5	ENSMUSG00000032294	ProperStrand	1296	chr13	23392028	23392066	tRNA	tRNA97-ValCAC	.	971812	ProperStrand	52	1	-7.4638
chr4	133241408	133241425	protein_coding	Arid1a	exon	ENSMUSG00000007880	ProperStrand	465	chr7	29670760	29670777	protein_coding	Capn12	exon	ENSMUSG00000054083	ProperStrand	2	1	-16.6757
chr3	131980391	131980409	LINE	L1_Mur2	L1	chr3L1_Mur2131980045	ProperStrand	8	chr2	158182164	158182279	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	8	-inf
chr5	124819646	124819746	protein_coding	Sbno1	utr3	ENSMUSG00000038095	ProperStrand	134	chr7	116664822	116664899	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-3.8902
chr7	116664845	116664925	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	chr7	118219637	118219727	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	NonProperStrand	8	1	-6.4335
chr14	20703008	20703108	protein_coding	Gng2	intron	ENSMUSG00000043004	ProperStrand	15	chr4	131908289	131908348	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.7937
chr12	111858521	111858574	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr11	68887040	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	2	-1.0783
chr19	5948501	5950469	protein_coding	Pola2	exon	ENSMUSG00000024833	ProperStrand	29	chr18	75160712	75160776	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	1	-10.6552
chr7	29535209	29535283	protein_coding	Sars2	exon	ENSMUSG00000070699	ProperStrand	6	chr11	69483194	69483237	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-6.9324
chr2	153143173	153143189	protein_coding	Kif3b	exon	ENSMUSG00000027475	NonProperStrand	24	chr17	24857716	24857816	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.9467
chr8	83241470	83241513	protein_coding	Smarca5	exon	ENSMUSG00000031715	ProperStrand	115	chr11	68886975	68887030	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-2.9488
chr15	36529308	36535526	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr6	124665279	124665439	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	2	-3.4391
chr12	17374102	17374202	protein_coding	Nol10	intron	ENSMUSG00000061458	ProperStrand	31	chr5	130300500	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.6980
chr11	74994820	74996760	protein_coding	Dph1	exon	ENSMUSG00000078789	ProperStrand	6	chr4	131908687	131908731	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.3738
chr19	8963032	8963048	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	chr8	113362430	113362488	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	1	-6.1365
chr1	55044302	55062701	protein_coding	Sf3b1	exon	ENSMUSG00000025982	ProperStrand	158	chr9	15119678	15119768	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	14	-20.4056
chr8	108620084	108620169	protein_coding	Nfatc3	exon	ENSMUSG00000031902	ProperStrand	75	chr19	8798764	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-4.3737
chr8	73419655	73419755	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	chr11	68876541	68876559	tRNA	tRNA1821-SerGCT	.	883759	ProperStrand	39	1	-3.9253
chr18	73693110	73693132	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr1	162968214	162968270	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	3	-1.5008
chr6	100180827	100180891	protein_coding	Rybp	utr3	ENSMUSG00000072872	ProperStrand	51	chr1	162965981	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-3.9062
chr7	16502578	16502687	protein_coding	Sepw1	utr3	ENSMUSG00000041571	ProperStrand	9	chr1	162967160	162967178	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	1	-12.5634
chr15	73363269	73363359	protein_coding	Dennd3	exon	ENSMUSG00000036661	ProperStrand	11	chr4	131908275	131908355	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.3989
chr15	36173920	36173937	protein_coding	Rnf19a	exon	ENSMUSG00000022280	ProperStrand	9	chr15	77356785	77356801	protein_coding	Apol7c	exon	ENSMUSG00000044309	ProperStrand	197	1	-14.8128
chr5	138403913	138403930	protein_coding	Gjc3	intron	ENSMUSG00000056966	NonProperStrand	11	chr16	23111449	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.1830
chr9	64023462	64025794	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	chr11	97642952	97643077	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	30	-22.1685
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr1	73971351	73971370	protein_coding	Tns1	exon	ENSMUSG00000055322	NonProperStrand	27	1	-12.0431
chr2	158205260	158205406	snoRNA	ENSMUSG00000064585_SNORA71	.	ENSMUSG00000064585	ProperStrand	418	chr7	116663635	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	5	-2.1659
chr9	21816640	21816683	protein_coding	Prkcsh	intron	ENSMUSG00000003402	ProperStrand	58	chr1	162965986	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-6.2162
chr3	121160527	121160575	protein_coding	Cnn3	utr3	ENSMUSG00000053931	ProperStrand	77	chr12	112779193	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-4.2988
chr16	85802546	85802564	protein_coding	Adamts1	exon	ENSMUSG00000022893	ProperStrand	102	chr10	69345238	69345254	protein_coding	Ank3	exon	ENSMUSG00000069601	ProperStrand	76	1	-11.7724
chr9	118469963	118469980	protein_coding	Golga4	exon	ENSMUSG00000038708	ProperStrand	95	chr1	102076760	102076790	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	1	-8.5151
chr19	8799581	8799644	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	chr6	124665482	124665523	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	5	-6.5041
chr3	4339084	4339117	rRNA	n-R5s194	.	ENSMUSG00000077912	ProperStrand	24	chr5	130300419	130300498	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-7.0445
chr2	32563527	32563545	protein_coding	Cdk9	exon	ENSMUSG00000009555	NonProperStrand	49	chr11	87172190	87172206	protein_coding	Ppm1e	exon	ENSMUSG00000046442	ProperStrand	112	1	-12.4698
chr13	69767908	69767981	protein_coding	Nsun2	intron	ENSMUSG00000021595	ProperStrand	110	chr16	23110454	23110510	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	4	-6.1626
chr9	53345277	53345342	protein_coding	Npat	intron	ENSMUSG00000033054	ProperStrand	20	chr13	38438147	38438163	protein_coding	Bmp6	exon	ENSMUSG00000039004	ProperStrand	21	1	-17.4428
chr10	90616043	90616102	protein_coding	Tmpo	exon	ENSMUSG00000019961	ProperStrand	57	chr3	89973916	89973932	protein_coding	Nup210l	exon	ENSMUSG00000027939	NonProperStrand	3	1	-20.1669
chr5	138866918	138866947	LTR	ETnERV3-int	ERVK	chr5ETnERV3-int138866675	ProperStrand	1	chr9	120039534	120039658	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-inf
chr2	147009105	147009122	protein_coding	Nkx2-2	utr3	ENSMUSG00000027434	NonProperStrand	84	chr17	36097663	36097764	protein_coding	Abcf1	exon	ENSMUSG00000038762	ProperStrand	206	1	-10.1633
chr11	5965860	5965876	protein_coding	Camk2b	intron	ENSMUSG00000057897	ProperStrand	14	chr7	35828831	35829330	protein_coding	Pepd	exon	ENSMUSG00000063931	ProperStrand	12	1	-22.4876
chr11	40515327	40515417	protein_coding	Hmmr	utr3	ENSMUSG00000020330	ProperStrand	61	chr2	130101972	130102052	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-5.3243
chr1	59600637	59600656	protein_coding	Gm973	intron	ENSMUSG00000047361	NonProperStrand	13	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-8.9235
chr8	49075593	49075656	protein_coding	Wwc2	utr5	ENSMUSG00000031563	ProperStrand	37	chr13	78303388	78303405	protein_coding	Fam172a	utr3	ENSMUSG00000064138	NonProperStrand	9	1	-17.9558
chr19	45409733	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr4	57869133	57869228	protein_coding	Gm20459	exon	ENSMUSG00000089945	ProperStrand	31	1	-10.0465
chr7	25790953	25790969	protein_coding	Atp1a3	utr5	ENSMUSG00000040907	ProperStrand	66	chr8	87185617	87185680	protein_coding	Ier2	utr3	ENSMUSG00000053560	ProperStrand	22	1	-15.1543
chr9	64981502	64981592	protein_coding	Igdcc4	exon	ENSMUSG00000032816	ProperStrand	29	chr19	8798740	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-6.2273
chr2	121022550	121022620	protein_coding	Trp53bp1	utr3	ENSMUSG00000043909	ProperStrand	45	chr11	97641506	97641591	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	1	-8.4330
chr11	69730623	69730839	protein_coding	Eif5a	utr3	ENSMUSG00000078812	ProperStrand	164	chr7	116664816	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-2.0137
chr17	25793370	25793387	protein_coding	Lmf1	utr3	ENSMUSG00000002279	NonProperStrand	12	chr18	78017824	78017857	protein_coding	Atp5a1	exon	ENSMUSG00000025428	ProperStrand	254	1	-13.7033
chr11	120670863	120670898	protein_coding	Fasn	exon	ENSMUSG00000025153	ProperStrand	298	chr7	147094875	147094892	protein_coding	Kndc1	exon	ENSMUSG00000066129	NonProperStrand	17	1	-12.6638
chr10	13705413	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr6	115758011	115758118	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-1.3271
chr14	52693512	52693528	protein_coding	Hnrnpc	utr3	ENSMUSG00000060373	ProperStrand	75	chr12	17552948	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-4.6587
chr7	52135335	52135395	protein_coding	Med25	exon	ENSMUSG00000002968	ProperStrand	33	chr1	162968445	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-7.2678
chr16	57160253	57161813	protein_coding	Nit2	exon	ENSMUSG00000022751	ProperStrand	6	chr5	121655016	121655095	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-8.3778
chr8	72347982	72348016	protein_coding	Lpar2	exon	ENSMUSG00000031861	ProperStrand	44	chr6	91937130	91937146	protein_coding	Fgd5	exon	ENSMUSG00000034037	ProperStrand	38	1	-14.8705
chr19	43581827	43581846	protein_coding	Got1	exon	ENSMUSG00000025190	ProperStrand	32	chr7	147130900	147130947	protein_coding	Utf1	utr3	ENSMUSG00000047751	ProperStrand	67	2	-18.9870
chr5	77396337	77396373	protein_coding	Paics	utr3	ENSMUSG00000029247	ProperStrand	78	chr9	15119337	15119397	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-4.6028
chr2	28306450	28306469	protein_coding	Ppp1r26	exon	ENSMUSG00000035829	NonProperStrand	1	chr16	36071984	36072000	protein_coding	Ccdc58	utr5	ENSMUSG00000075229	NonProperStrand	55	1	-inf
chr10	61143526	61143607	protein_coding	Sar1a	intron	ENSMUSG00000020088	ProperStrand	15	chr19	8799850	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	2	-12.4163
chr1	66521957	66521973	protein_coding	Unc80	intron	ENSMUSG00000055567	NonProperStrand	212	chr15	102135589	102136140	protein_coding	Espl1	exon	ENSMUSG00000058290	ProperStrand	172	1	-8.6726
chr17	75690723	75690739	protein_coding	Ltbp1	exon	ENSMUSG00000001870	ProperStrand	136	chrX	132673816	132673833	protein_coding	Bex4	intron	ENSMUSG00000047844	NonProperStrand	70	1	-11.3605
chr8	87525135	87525238	protein_coding	Hook2	exon	ENSMUSG00000052566	ProperStrand	204	chr11	62416977	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-3.6959
chr2	51967798	51967878	protein_coding	Rif1	exon	ENSMUSG00000036202	ProperStrand	201	chr16	23111740	23111821	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	10	-10.6626
chr3	33967118	33967882	protein_coding	Fxr1	exon	ENSMUSG00000027680	ProperStrand	58	chr3	123210928	123210961	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.1217
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr4	8793162	8793179	protein_coding	Chd7	exon	ENSMUSG00000041235	ProperStrand	80	1	-8.0178
chr7	111376787	111379256	protein_coding	Trim6	exon	ENSMUSG00000072244	ProperStrand	40	chr16	23110548	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.1765
chr14	17073313	17073371	protein_coding	Oxsm	exon	ENSMUSG00000021786	ProperStrand	15	chr16	23111704	23111794	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	6	-23.1670
chr7	30774076	30782808	protein_coding	Zfp568	exon	ENSMUSG00000074221	ProperStrand	110	chr19	8800376	8800456	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-2.4532
chr8	98265878	98265968	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	chr9	15119646	15119726	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-1.5966
chr1	183853750	183853767	protein_coding	Enah	exon	ENSMUSG00000022995	NonProperStrand	33	chr4	131865856	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-4.8432
chr11	20991333	20991350	protein_coding	Peli1	utr5	ENSMUSG00000020134	ProperStrand	69	chr7	52714013	52714487	protein_coding	Ftl1	exon	ENSMUSG00000050708	ProperStrand	807	1	-7.8375
chr8	86257911	86257928	protein_coding	Cd97	exon	ENSMUSG00000002885	ProperStrand	37	chr7	20310054	20310070	protein_coding	Pvrl2	exon	ENSMUSG00000062300	ProperStrand	110	1	-13.0733
chr2	26493427	26493500	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr2	130103435	130103501	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	5	-2.1777
chr9	95953537	95953587	SINE	B1F1	Alu	chr9B1F195953486	ProperStrand	1	chr2	143373722	143373739	protein_coding	Pcsk2	intron	ENSMUSG00000027419	ProperStrand	16	1	-inf
chr5	122009145	122009161	LTR	RMER10B	ERVL	chr5RMER10B122008981	NonProperStrand	44	chr3	123210895	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.5877
chr9	65550254	65550354	protein_coding	Zfp609	exon	ENSMUSG00000040524	ProperStrand	87	chr11	77995188	77995218	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-5.4541
chr9	27134491	27134509	protein_coding	Igsf9b	exon	ENSMUSG00000034275	ProperStrand	18	chr16	23111389	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.2408
chr10	51865578	51865594	protein_coding	Ros1	exon	ENSMUSG00000019893	NonProperStrand	15	chr17	87316802	87316818	protein_coding	1700090G07Rik	utr5	ENSMUSG00000037689	ProperStrand	7	1	-inf
chr7	34998770	34998823	protein_coding	Gpi1	intron	ENSMUSG00000036427	ProperStrand	288	chr9	15118322	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	3	-3.1061
chr16	20127287	20127370	protein_coding	Klhl24	utr3	ENSMUSG00000062901	ProperStrand	212	chr9	15118348	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	4	-5.7600
chr11	68886975	68887034	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	chr13	22009032	22009065	tRNA	tRNA985-ArgTCT	.	679944	ProperStrand	3	1	-10.4040
chr9	109984354	109984444	protein_coding	Mtap4	exon	ENSMUSG00000032479	ProperStrand	188	chr7	116663711	116663762	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-0.8314
chr13	9833564	9833682	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr11	68212422	68212457	protein_coding	Ntn1	intron	ENSMUSG00000020902	ProperStrand	44	1	-5.5589
chrX	84483703	84483751	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr18	63109676	63109692	protein_coding	Apcdd1	exon	ENSMUSG00000071847	NonProperStrand	254	1	-5.3999
chrX	13064698	13064714	protein_coding	Nyx	utr3	ENSMUSG00000051228	NonProperStrand	4	chr11	68886952	68887041	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-9.7129
chr2	178090328	178090349	protein_coding	Sycp2	intron	ENSMUSG00000060445	NonProperStrand	5	chr19	8800356	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	3	-19.3459
chr3	65152966	65152983	antisense	A730090N16Rik	.	ENSMUSG00000090120	ProperStrand	14	chr14	21511049	21511285	protein_coding	Sec24c	exon	ENSMUSG00000039367	ProperStrand	60	1	-16.2961
chr9	66314325	66314363	protein_coding	Herc1	exon	ENSMUSG00000038664	ProperStrand	81	chr10	23505152	23505266	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-0.8528
chr11	69870769	69870785	protein_coding	Asgr1	exon	ENSMUSG00000020884	NonProperStrand	145	chr10	90581113	90581151	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-3.1573
chr15	36528717	36528777	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr4	56910571	56910629	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-1.2745
chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	chr2	26493383	26493469	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-0.9055
chr3	133007614	133007693	protein_coding	Ppa2	intron	ENSMUSG00000028013	ProperStrand	11	chr7	133702154	133702179	protein_coding	Eif3c	exon	ENSMUSG00000030738	ProperStrand	92	4	-inf
chr4	33072429	33072519	protein_coding	Rragd	intron	ENSMUSG00000028278	ProperStrand	14	chr5	121655035	121655115	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-6.5960
chr7	117189861	117189944	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr11	106362304	106362380	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	3	-1.1879
chr2	102187125	102197594	protein_coding	Trim44	exon	ENSMUSG00000027189	ProperStrand	26	chr1	162968212	162968294	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-8.4935
chr18	10052128	10052150	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr16	32243901	32243943	snoRNA	ENSMUSG00000080440_SNORA79	.	ENSMUSG00000080440	ProperStrand	140	3	-15.9933
chr8	73419404	73419596	protein_coding	Rpl18a	exon	ENSMUSG00000045128	ProperStrand	394	chr16	23110466	23110526	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	4	-1.5278
chr11	115885016	115885083	protein_coding	H3f3b	exon	ENSMUSG00000016559	ProperStrand	76	chr4	85016349	85016365	protein_coding	Sh3gl2	intron	ENSMUSG00000028488	NonProperStrand	313	1	-9.5285
chr7	79968648	79968738	LTR	ORR1B1	MaLR	chr7ORR1B179968601	ProperStrand	1	chr10	45032911	45033001	protein_coding	Popdc3	intron	ENSMUSG00000019848	NonProperStrand	1	1	-inf
chr2	34631184	34631207	protein_coding	Hspa5	exon	ENSMUSG00000026864	ProperStrand	181	chr7	116664819	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	6	-7.4896
chr17	66468411	66468427	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	chr12	83442801	83442928	protein_coding	Sipa1l1	exon	ENSMUSG00000042700	ProperStrand	84	4	-inf
chr5	5118481	5118499	protein_coding	Cdk14	intron	ENSMUSG00000028926	NonProperStrand	23	chr8	73419657	73419774	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.9417
chr10	66688710	66688762	protein_coding	Jmjd1c	exon	ENSMUSG00000037876	ProperStrand	110	chr19	8799596	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-5.5738
chr11	50024072	50024162	protein_coding	Sqstm1	exon	ENSMUSG00000015837	ProperStrand	36	chr16	23111691	23111771	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.7618
chr16	18541956	18542065	protein_coding	Gnb1l	intron	ENSMUSG00000000884	ProperStrand	25	chr15	79908956	79908983	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-7.2107
chr5	115940301	115940406	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	chr11	98878344	98878365	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-2.0545
chr3	88387762	88387799	protein_coding	Ssr2	exon	ENSMUSG00000041355	ProperStrand	22	chr8	129468746	129468834	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-6.3807
chr18	90760220	90760317	Satellite	MMSAT4	Satellite	chr18MMSAT490760223	ProperStrand	1	chr9	61762209	61762238	protein_coding	Rplp1	utr5	ENSMUSG00000007892	ProperStrand	116	1	-inf
chr7	111488605	111488622	protein_coding	Trim12c	utr3	ENSMUSG00000057143	ProperStrand	28	chr9	120039578	120039678	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	7	-20.5493
chr11	4982233	4982294	protein_coding-noncoding	Ewsr1	utr3	ENSMUSG00000009079	ProperStrand	3	chr18	35716818	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-8.1910
chr7	86805811	86810581	protein_coding	5730590G19Rik	exon	ENSMUSG00000046591	ProperStrand	45	chr16	23110973	23111010	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-6.0915
chr5	141000555	141000573	protein_coding	Chst12	exon	ENSMUSG00000036599	NonProperStrand	42	chr11	77995189	77995255	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-6.8902
chr14	45949538	45949554	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	chr4	130305550	130305619	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	1	-6.5404
chr14	57292740	57292798	protein_coding	Mphosph8	exon	ENSMUSG00000079184	ProperStrand	29	chr9	120039565	120039622	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-4.6899
chr6	17237062	17237080	protein_coding	Cav2	utr3	ENSMUSG00000000058	ProperStrand	8	chr11	69481334	69481419	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-7.1653
chr8	113145317	113145335	protein_coding	Vac14	intron	ENSMUSG00000010936	NonProperStrand	23	chr17	27699536	27699564	protein_coding	Hmga1	utr3	ENSMUSG00000046711	ProperStrand	180	1	-13.0513
chr5	101194176	101194245	protein_coding-noncoding	Helq	utr3	ENSMUSG00000035266	ProperStrand	1	chr10	110918674	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-inf
chr14	79881484	79881559	protein_coding	Elf1	intron	ENSMUSG00000036461	ProperStrand	15	chr5	121655099	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-6.4555
chr11	95628564	95628611	protein_coding	Zfp652	utr3	ENSMUSG00000075595	ProperStrand	48	chr3	123210854	123210876	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.4382
chr9	121823892	121823908	protein_coding	Cyp8b1	exon	ENSMUSG00000050445	NonProperStrand	101	chr7	4691730	4691754	protein_coding	Suv420h2	utr5	ENSMUSG00000059851	NonProperStrand	70	1	-11.9578
chr3	152450608	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	chr11	55296195	55296308	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-2.0240
chr13	51758035	51760707	protein_coding	Secisbp2	exon	ENSMUSG00000035139	ProperStrand	19	chr7	116663699	116663770	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.6387
chr3	121969209	121969268	protein_coding	Gclm	exon	ENSMUSG00000028124	ProperStrand	31	chr16	23111447	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	6	-13.8800
chr8	80136600	80136617	lincRNA	4933431K23Rik	intron	ENSMUSG00000086451	NonProperStrand	8	chr2	25360393	25360455	protein_coding	Fbxw5	exon	ENSMUSG00000015095	ProperStrand	12	1	-19.5927
chr4	131908359	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	chr6	125071839	125071878	snoRNA	ENSMUSG00000088208_SCARNA11	.	ENSMUSG00000088208	ProperStrand	113	6	-6.1609
chr8	23110621	23113277	protein_coding	Atp7b	exon	ENSMUSG00000006567	ProperStrand	7	chr1	173041631	173041649	tRNA	tRNA710-ValCAC	.	1811408	ProperStrand	206	2	-inf
chr5	29778083	29778106	protein_coding	Nom1	utr3	ENSMUSG00000001569	NonProperStrand	12	chr5	23983903	23985596	protein_coding	Agap3	exon	ENSMUSG00000023353	ProperStrand	39	12	-inf
chr3	152450608	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	chr1	88247766	88247876	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	3	-3.6608
chr4	140924202	140924219	protein_coding	Fam131c	utr5	ENSMUSG00000006218	NonProperStrand	6	chr14	33005094	33005194	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	4	-19.0829
chr11	120453976	120454019	protein_coding	Alyref	utr3	ENSMUSG00000025134	ProperStrand	53	chr15	101926833	101926906	protein_coding	Eif4b	utr3	ENSMUSG00000058655	ProperStrand	484	1	-9.3828
chr11	109827453	109827471	protein_coding	Abca8b	intron	ENSMUSG00000020620	ProperStrand	8	chr2	26494742	26494758	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-7.0621
chr4	97553035	97553052	protein_coding	Nfia	intron	ENSMUSG00000028565	NonProperStrand	74	chr9	78327333	78327461	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-5.9211
chr4	136101981	136101997	protein_coding	Luzp1	utr3	ENSMUSG00000001089	NonProperStrand	47	chr4	136501867	136501885	protein_coding	Epha8	exon	ENSMUSG00000028661	ProperStrand	13	1	-16.9860
chr14	31827478	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	chr17	24857717	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	30	-11.1489
chr4	138998672	139023162	protein_coding	Ubr4	exon	ENSMUSG00000066036	ProperStrand	304	chr7	116664807	116664899	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-0.8806
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr5	110877313	110877329	protein_coding	Fbrsl1	utr5	ENSMUSG00000043323	ProperStrand	131	1	-7.2823
chr15	102162148	102162238	protein_coding	Myg1	utr5	ENSMUSG00000001285	ProperStrand	12	chr15	102161973	102162063	protein_coding	Pfdn5	utr3	ENSMUSG00000001289	ProperStrand	6	1	-19.9654
chr9	15119287	15119415	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	chr4	56910495	56910628	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	6	-1.9504
chr1	95691490	95691580	protein_coding	Dtymk	intron	ENSMUSG00000026281	ProperStrand	34	chr15	79908938	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-6.5942
chr13	62944660	62944677	protein_coding	Fbp2	intron	ENSMUSG00000021456	ProperStrand	100	chr18	36447178	36447227	protein_coding	Pura	exon	ENSMUSG00000043991	ProperStrand	20	1	-14.5159
chr18	31858257	31858347	protein_coding	Sap130	exon	ENSMUSG00000024260	ProperStrand	32	chr17	24857767	24857847	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.4074
chr7	29679026	29679063	protein_coding	Actn4	utr3	ENSMUSG00000054808	ProperStrand	120	chr15	98350146	98350201	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-3.4562
chr9	107467686	107467825	protein_coding	Tusc2	utr3	ENSMUSG00000010054	ProperStrand	2	chr11	106874192	106874212	tRNA	tRNA945-ArgCCG	.	352590	ProperStrand	133	1	-19.1147
chr15	98350146	98350255	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	chr1	89681230	89681339	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	7	-0.8302
chr15	59481075	59483047	protein_coding	Trib1	exon	ENSMUSG00000032501	ProperStrand	9	chr16	23110938	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.9939
chrX	71631785	71631875	protein_coding	Fam3a	exon	ENSMUSG00000031399	ProperStrand	3	chr16	23111389	23111482	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-12.1275
chr15	34874898	34888682	protein_coding	Stk3	exon	ENSMUSG00000022329	ProperStrand	13	chr17	35089181	35089234	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-8.5579
chrX	84483709	84483730	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr18	4198909	4198950	pseudogene	Gm10557	.	ENSMUSG00000073647	ProperStrand	1	1	-inf
chr7	51828028	51828044	protein_coding	Napsa	exon	ENSMUSG00000002204	ProperStrand	88	chr14	71065684	71065719	protein_coding	Xpo7	utr3	ENSMUSG00000022100	ProperStrand	109	1	-11.3442
chr8	11834281	11834297	protein_coding	Arhgef7	utr3	ENSMUSG00000031511	ProperStrand	38	chr12	31943871	31943940	snoRNA	ENSMUSG00000065200_SNORA65	.	ENSMUSG00000065200	ProperStrand	19	1	-16.6149
chr2	121282473	121282563	protein_coding-noncoding	Serf2	utr3	ENSMUSG00000074884	ProperStrand	5	chr10	110918549	110918629	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-13.8288
chr9	21483586	21490476	protein_coding	Smarca4	exon	ENSMUSG00000032187	ProperStrand	196	chr18	75161533	75161580	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-4.8829
chr7	117189977	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	chr1	59749389	59749429	snoRNA	ENSMUSG00000077358_SNORD70	.	ENSMUSG00000077358	ProperStrand	63	1	-3.2436
chr1	124572471	124572571	LINE	L1Md_T	L1	chr1L1Md_T124568339	ProperStrand	1	chr9	15119631	15119715	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-inf
chr15	76427498	76427673	protein_coding	Cpsf1	exon	ENSMUSG00000034022	ProperStrand	127	chr4	122968582	122968672	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-4.8187
chr10	117852123	117852141	Simple_repeat	(TCTA)n	Simple_repeat	chr10(TCTA)n117851983	ProperStrand	1	chr9	59516837	59518283	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	1	-inf
chr2	154689384	154689574	protein_coding	Raly	exon	ENSMUSG00000027593	ProperStrand	116	chr18	35102297	35102341	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	2	-8.6848
chr13	9833561	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr6	118353247	118354335	protein_coding	Bms1	exon	ENSMUSG00000030138	ProperStrand	107	1	-3.8542
chr12	111930954	111932456	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr18	35714222	35714290	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	3	-0.7738
chr7	108972922	108972970	protein_coding	Inppl1	exon	ENSMUSG00000032737	ProperStrand	272	chr11	96112970	96112987	protein_coding	Gm53	exon	ENSMUSG00000078706	NonProperStrand	16	1	-12.9700
chr1	162965981	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	chr5	135529901	135529988	snoRNA	ENSMUSG00000088008_SCARNA20	.	ENSMUSG00000088008	ProperStrand	139	1	-2.1299
chr8	6319434	6319453	LTR	RMER17B	ERVK	chr8RMER17B6319365	NonProperStrand	1	chr9	120037992	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-inf
chr2	11602046	11603567	protein_coding	Il2ra	exon	ENSMUSG00000026770	ProperStrand	17	chr12	83442323	83442340	protein_coding	Sipa1l1	exon	ENSMUSG00000042700	NonProperStrand	12	1	-19.1709
chr9	83678799	83681879	protein_coding	Elovl4	exon	ENSMUSG00000032262	ProperStrand	159	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-5.3169
chr7	87787176	87787194	protein_coding	Crtc3	intron	ENSMUSG00000030527	ProperStrand	5	chr15	79908930	79908983	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-10.5905
chr14	30851615	30851631	protein_coding	Chdh	utr3	ENSMUSG00000015970	ProperStrand	50	chr15	63781671	63802513	protein_coding	Fam49b	utr5	ENSMUSG00000022378	ProperStrand	33	1	-14.8865
chr5	137358716	137358733	protein_coding	Emid2	exon	ENSMUSG00000004415	NonProperStrand	38	chr7	52382753	52382832	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-7.6632
chr1	168031217	168031243	protein_coding	Dusp27	exon	ENSMUSG00000026564	ProperStrand	47	chr7	150717298	150717424	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	4	-18.2554
chr3	133148566	133148643	protein_coding	Tet2	exon	ENSMUSG00000040943	ProperStrand	192	chr9	120037988	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-2.5710
chr19	41992162	41992178	protein_coding	Pgam1	exon	ENSMUSG00000011752	ProperStrand	124	chr9	21017024	21017040	protein_coding	Pde4a	utr3	ENSMUSG00000032177	NonProperStrand	2	1	-inf
chr10	127831963	127832053	protein_coding	Ankrd52	intron	ENSMUSG00000014498	ProperStrand	26	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-8.6612
chr6	122266144	122266172	protein_coding	M6pr	exon	ENSMUSG00000007458	ProperStrand	56	chr16	56035876	56035991	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	1	-9.0837
chr2	90448800	90448890	LINE	L1Md_F2	L1	chr2L1Md_F290444938	NonProperStrand	2	chr2	52308860	52308950	protein_coding	Cacnb4	intron	ENSMUSG00000017412	ProperStrand	14	1	-inf
chr2	84530865	84531297	protein_coding	Zdhhc5	exon	ENSMUSG00000034075	NonProperStrand	144	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-3.7101
chr14	55513007	55513212	protein_coding	Pabpn1	exon	ENSMUSG00000022194	ProperStrand	22	chr7	117189964	117190054	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	3	-12.4176
chr7	28366821	28366911	protein_coding	2310022A10Rik	utr3	ENSMUSG00000049643	ProperStrand	10	chr10	110918585	110918665	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-6.9682
chr13	55907670	55907686	protein_coding	Catsper3	exon	ENSMUSG00000021499	NonProperStrand	7	chr4	131908239	131908297	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-5.3201
chr11	102294588	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr1	136243345	136243444	protein_coding	Tmem183a	utr3	ENSMUSG00000042305	ProperStrand	10	1	-12.5568
chr11	101631652	101631668	protein_coding	Etv4	utr3	ENSMUSG00000017724	ProperStrand	10	chr17	45707679	45708024	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	7	-inf
chr9	120859832	120868999	protein_coding	Ctnnb1	exon	ENSMUSG00000006932	ProperStrand	214	chr4	131908689	131908798	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-1.6558
chr4	129328039	129328853	protein_coding	Kpna6	exon	ENSMUSG00000003731	ProperStrand	39	chr11	121210616	121215636	protein_coding	Wdr45l	utr5	ENSMUSG00000025173	ProperStrand	8	1	-17.6839
chr7	151765212	151765228	antisense	Gm10574	.	ENSMUSG00000073778	ProperStrand	357	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	2	-6.3705
chr4	43505808	43505898	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr2	53012550	53013001	protein_coding	Prpf40a	exon	ENSMUSG00000061136	ProperStrand	129	1	-1.7815
chr11	29088397	29088417	protein_coding	Smek2	exon	ENSMUSG00000020463	ProperStrand	4	chr2	120965795	120965812	protein_coding	Lcmt2	utr5	ENSMUSG00000074890	NonProperStrand	2	1	-inf
chr11	116535465	116535533	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr14	52829478	52829569	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-1.3586
chr15	7111890	7111914	protein_coding	Lifr	intron	ENSMUSG00000054263	ProperStrand	64	chr7	29136525	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	4	-8.3693
chr5	31459912	31459985	protein_coding	Gtf3c2	utr3	ENSMUSG00000029144	ProperStrand	22	chr16	23110828	23110889	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-6.3713
chr11	60001209	60001231	protein_coding	Rai1	exon	ENSMUSG00000062115	ProperStrand	25	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.9342
chr14	64081493	64081513	protein_coding	Fam167a	utr3	ENSMUSG00000035095	ProperStrand	80	chr14	76247722	76247779	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-3.6335
chr16	64851346	64851368	Simple_repeat	(CCG)n	Simple_repeat	chr16(CCG)n64851329	NonProperStrand	15	chr9	65127126	65127142	protein_coding	Cilp	exon	ENSMUSG00000042254	ProperStrand	212	1	-13.6013
chr1	3661500	3661517	protein_coding	Xkr4	utr5	ENSMUSG00000051951	ProperStrand	59	chr2	32818885	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-5.5036
chr10	23505549	23505572	protein_coding	Rps12	intron	ENSMUSG00000061983	ProperStrand	309	chr1	89673550	89673645	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	2	-1.5492
chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	chr9	120038492	120038674	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-0.7158
chr13	68759738	68764669	protein_coding	Adcy2	exon	ENSMUSG00000021536	ProperStrand	237	chr1	162966812	162966843	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-3.6224
chr11	78313939	78313956	protein_coding	Vtn	exon	ENSMUSG00000017344	ProperStrand	188	chr5	64670653	64673071	protein_coding	Tbc1d1	exon	ENSMUSG00000029174	ProperStrand	44	1	-11.6479
chr1	181320402	181320424	protein_coding	Smyd3	intron	ENSMUSG00000055067	NonProperStrand	190	chrX	34622906	34622990	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-1.2957
chr8	128951372	128951419	protein_coding	Gm17296	exon	ENSMUSG00000090290	ProperStrand	6	chr3	123210854	123210933	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-15.5979
chr17	34089206	34089242	protein_coding	Rps18	exon	ENSMUSG00000008668	ProperStrand	111	chr1	66521957	66521973	protein_coding	Unc80	intron	ENSMUSG00000055567	NonProperStrand	212	1	-9.5473
chr12	87811434	87811486	protein_coding	Esrrb	exon	ENSMUSG00000021255	ProperStrand	254	chr1	63785774	63785881	protein_coding	Fastkd2	exon	ENSMUSG00000025962	ProperStrand	2	1	-17.9446
chr11	100232653	100232708	protein_coding	Jup	utr3	ENSMUSG00000001552	ProperStrand	123	chr16	72800514	72800532	protein_coding	Robo1	intron	ENSMUSG00000022883	NonProperStrand	188	1	-9.5820
chr11	119288880	119288980	protein_coding	Rnf213	exon	ENSMUSG00000070327	ProperStrand	20	chr7	116663634	116663674	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.5385
chr2	113674143	113674199	protein_coding	Arhgap11a	exon	ENSMUSG00000041219	ProperStrand	47	chr6	120467088	120468467	protein_coding	Cecr5	exon	ENSMUSG00000058979	ProperStrand	97	1	-12.8439
chr9	100966289	100966307	SINE	B4A	B4	chr9B4A100966214	ProperStrand	51	chr10	75216139	75216186	protein_coding	Cabin1	exon	ENSMUSG00000020196	ProperStrand	62	1	-13.5769
chr2	119000357	119000374	protein_coding	Dnajc17	intron	ENSMUSG00000034278	ProperStrand	6	chr11	97643037	97643080	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-6.9580
chr9	48241068	48241084	DNA	Cheshire	MER1_type	chr9Cheshire48240856	ProperStrand	17	chr1	162965980	162966014	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-6.0488
chr13	107632174	107632264	protein_coding	Ipo11	utr5	ENSMUSG00000078933	ProperStrand	3	chr9	64023249	64023329	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	2	-20.7944
chr4	22414139	22414155	protein_coding	Pou3f2	exon	ENSMUSG00000052621	NonProperStrand	90	chr11	62416949	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-5.2501
chr8	24050895	24050988	protein_coding	Myst3	exon	ENSMUSG00000031540	ProperStrand	111	chr17	80052255	80052278	protein_coding	Fam82a1	intron	ENSMUSG00000036368	NonProperStrand	1	1	-inf
chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	chr2	154718493	154718529	protein_coding	Eif2s2	utr5	ENSMUSG00000074656	ProperStrand	96	1	-8.3335
chr17	67712818	67712835	LTR	ORR1E	MaLR	chr17ORR1E67712788	ProperStrand	39	chr3	123210920	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.7988
chr9	65120741	65120757	protein_coding	Cilp	exon	ENSMUSG00000042254	ProperStrand	212	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-4.7626
chr14	33460257	33460276	protein_coding	Prrxl1	exon	ENSMUSG00000041730	ProperStrand	2	chr16	23110914	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr1	88247742	88247876	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	chr8	73419656	73419773	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	24	-1.6025
chr7	17005592	17005683	protein_coding	Zc3h4	exon	ENSMUSG00000059273	ProperStrand	95	chr12	106269284	106269336	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-3.2879
chrX	34667269	34667285	protein_coding	Nkap	exon	ENSMUSG00000016409	NonProperStrand	133	chr11	62418013	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-4.0290
mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr16	4886395	4886411	protein_coding	Mgrn1	exon	ENSMUSG00000022517	NonProperStrand	157	2	-6.7889
chr4	134029563	134029594	protein_coding	Stmn1	utr3	ENSMUSG00000028832	ProperStrand	54	chr16	23111459	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-5.9602
chr11	6375964	6375981	antisense	Gm11973	.	ENSMUSG00000086839	NonProperStrand	6	chr4	131865429	131865517	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	2	-14.0331
chr2	66980761	66980778	LTR	RMER19B	ERVK	chr2RMER19B66980263	ProperStrand	35	chr18	73693167	73693186	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-6.5886
chr11	98860613	98862123	protein_coding	Top2a	exon	ENSMUSG00000020914	ProperStrand	324	chr11	116938557	116938647	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	10	-inf
chr7	52684830	52684930	protein_coding	Ruvbl2	exon	ENSMUSG00000003868	ProperStrand	41	chr11	98878344	98878411	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-7.0409
chr17	47080391	47081494	protein_coding	Ubr2	exon	ENSMUSG00000023977	ProperStrand	172	chr4	108278918	108278934	protein_coding	Orc1	exon	ENSMUSG00000028587	ProperStrand	161	1	-9.2215
chr2	158448190	158448270	DNA	URR1A	MER1_type	chr2URR1A158448201	NonProperStrand	1	chr2	158448002	158448092	LTR	ORR1A2	MaLR	chr2ORR1A2158447859	ProperStrand	1	1	-inf
chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	chr15	79913295	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-0.7057
chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	chr8	12757418	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-5.0925
chr2	90235320	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	129312624	129312714	protein_coding	Plk1	exon	ENSMUSG00000030867	ProperStrand	146	1	-2.8249
chr1	133252213	133253339	protein_coding	Srgap2	exon	ENSMUSG00000026425	ProperStrand	299	chr5	108334196	108334286	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	4	-7.3945
chrX	152009278	152009294	protein_coding	Ptchd1	exon	ENSMUSG00000041552	NonProperStrand	294	chr13	23636342	23636388	protein_coding	Hist1h3f	utr5	ENSMUSG00000059309	ProperStrand	26	1	-11.8196
chr5	121828827	121828843	protein_coding	Trafd1	exon	ENSMUSG00000042726	ProperStrand	81	chr11	62416601	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-4.5875
chr13	30338191	30338207	protein_coding	Mboat1	utr3	ENSMUSG00000038732	NonProperStrand	148	chr2	26493366	26493465	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-2.1506
chr11	106667555	106667642	protein_coding	Ccdc45	exon	ENSMUSG00000018372	ProperStrand	17	chrX	34622930	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-5.5847
chr5	30470743	30470765	protein_coding	Hadha	exon	ENSMUSG00000025745	ProperStrand	35	chr7	112782969	112782985	protein_coding	Arfip2	utr3	ENSMUSG00000030881	ProperStrand	191	1	-12.0792
chr8	73419554	73419599	protein_coding	Rpl18a	exon	ENSMUSG00000045128	ProperStrand	394	chr6	71832629	71832687	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	2	-3.8472
chr8	74446729	74446745	protein_coding	Zfp617	intron	ENSMUSG00000066880	NonProperStrand	208	chr8	32260340	32260425	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-2.3679
chr1	78451377	78451436	protein_coding	Farsb	exon	ENSMUSG00000026245	ProperStrand	40	chr10	110918564	110918654	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-4.2075
chr17	46692684	46692725	protein_coding	Srf	exon	ENSMUSG00000015605	ProperStrand	11	chr1	181975960	181975978	protein_coding	Cdc42bpa	intron	ENSMUSG00000026490	ProperStrand	24	1	-18.4466
chr15	79116883	79116955	protein_coding	Pla2g6	utr3	ENSMUSG00000042632	ProperStrand	32	chr17	69737986	69738002	protein_coding	Zfp161	utr3	ENSMUSG00000049672	NonProperStrand	45	1	-15.1621
chr16	64764555	64764633	protein_coding	4930453N24Rik	utr3	ENSMUSG00000059920	ProperStrand	39	chr10	90581034	90581087	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-5.6468
chr2	70529256	70529334	protein_coding	Gorasp2	utr3	ENSMUSG00000014959	ProperStrand	21	chr19	8963040	8963130	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.1775
chr10	118647875	118647896	protein_coding	Cand1	exon	ENSMUSG00000020114	ProperStrand	76	chr15	31531130	31531146	protein_coding	Cct5	utr5	ENSMUSG00000022234	NonProperStrand	1	1	-inf
chr5	111715369	111715454	lincRNA	Ttc28	exon	ENSMUSG00000033209	ProperStrand	15	chr16	57391759	57391792	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	7	-inf
chrX	71588991	71589908	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr4	131908687	131908900	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	14	-8.0674
chr15	79233323	79233339	protein_coding	Tmem184b	intron	ENSMUSG00000009035	ProperStrand	37	chr16	38158132	38158226	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	1	-9.6229
chr3	130859657	130859680	protein_coding	Lef1	intron	ENSMUSG00000027985	ProperStrand	9	chr4	120219962	120222090	protein_coding	Ctps	exon	ENSMUSG00000028633	ProperStrand	19	1	-19.1915
chr7	133528476	133528533	protein_coding	Nfatc2ip	utr3	ENSMUSG00000030722	ProperStrand	26	chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	2	-16.4627
chr6	128386729	128388438	protein_coding	Fkbp4	exon	ENSMUSG00000030357	ProperStrand	114	chr1	136745979	136745995	protein_coding	Ppp1r12b	intron	ENSMUSG00000073557	NonProperStrand	12	1	-15.3097
chr6	124761923	124761948	protein_coding	Tpi1	exon	ENSMUSG00000023456	ProperStrand	94	chrX	134975013	134975029	protein_coding	Il1rapl2	intron	ENSMUSG00000059203	NonProperStrand	23	1	-14.3486
chr13	6338816	6338837	SINE	RSINE1	B4	chr13RSINE16338808	ProperStrand	4	chr14	76247743	76247843	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-9.7427
chr12	17290757	17290857	protein_coding	Pdia6	utr3	ENSMUSG00000020571	ProperStrand	114	chr11	62416994	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	2	-7.9229
chr17	24645903	24645925	protein_coding	Traf7	utr3	ENSMUSG00000052752	ProperStrand	28	chr7	116664797	116664888	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-6.6521
chr2	162905579	162905613	protein_coding	Mybl2	intron	ENSMUSG00000017861	ProperStrand	230	chr1	187066848	187066917	snoRNA	ENSMUSG00000077571_Snora36b	.	ENSMUSG00000077571	ProperStrand	244	1	-7.8149
chr9	120038612	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	chr1	162967734	162967766	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	3	-2.5307
chr7	53964333	53965953	protein_coding	Saal1	exon	ENSMUSG00000006763	ProperStrand	6	chr11	6315947	6318235	protein_coding	Ppia	exon	ENSMUSG00000071866	ProperStrand	127	1	-16.5464
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr2	26880189	26880206	protein_coding	Slc2a6	exon	ENSMUSG00000036067	ProperStrand	3	2	-20.6577
chr12	19723413	19723432	LTR	MURVY-int	ERV1	chr12MURVY-int19718193	NonProperStrand	8	chr14	29831979	29831998	protein_coding	Lrtm1	intron	ENSMUSG00000045776	ProperStrand	1	1	-inf
chr3	142351261	142351279	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	1	-4.8204
chr4	43505817	43505907	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chrX	34149082	34149120	protein_coding	Akap17b	utr3	ENSMUSG00000059708	ProperStrand	14	2	-9.6466
chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	chr7	51511292	51511308	protein_coding	2410002F23Rik	intron	ENSMUSG00000045411	ProperStrand	628	1	-3.5530
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr14	99489238	99489269	protein_coding	Dis3	exon	ENSMUSG00000033166	ProperStrand	17	1	-8.9065
chr3	141904036	141904068	protein_coding	Pdlim5	utr3	ENSMUSG00000028273	ProperStrand	17	chr7	108053098	108053115	protein_coding	Arhgef17	intron	ENSMUSG00000032875	ProperStrand	33	1	-17.0200
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr13	101541067	101541088	protein_coding	Cenph	intron	ENSMUSG00000045273	NonProperStrand	45	1	-8.5510
chr2	93784059	93784076	LTR	MTEa	MaLR	chr2MTEa93783777	NonProperStrand	50	chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	1	-8.1600
chr3	146408226	146408315	protein_coding	Prkacb	exon	ENSMUSG00000005034	ProperStrand	15	chr2	158184128	158184208	snoRNA	ENSMUSG00000064995_SNORA71	.	ENSMUSG00000064995	ProperStrand	430	1	-12.1874
chr12	102151301	102151441	protein_coding	Ccdc88c	utr3	ENSMUSG00000021182	ProperStrand	151	chr11	6428035	6428154	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	4	-6.5802
chr16	23111812	23111837	protein_coding	Eif4a2	intron	ENSMUSG00000022884	ProperStrand	356	chr2	26493412	26493483	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-1.7873
chr3	27048987	27049048	protein_coding	Ect2	exon	ENSMUSG00000027699	ProperStrand	17	chr5	130295418	130295508	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-7.7636
chr16	57391759	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr1	88247814	88247865	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	2	-1.2796
chr11	120134653	120134734	protein_coding	Bahcc1	exon	ENSMUSG00000039741	ProperStrand	118	chr11	97643000	97643090	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.4037
chr7	52141253	52141563	protein_coding	Med25	exon	ENSMUSG00000002968	ProperStrand	33	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.3267
chr11	78313939	78313956	protein_coding	Vtn	exon	ENSMUSG00000017344	ProperStrand	188	chr4	131865380	131865420	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-1.9892
chr11	88716712	88716758	protein_coding	Akap1	intron	ENSMUSG00000018428	ProperStrand	45	chr16	23111448	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.6772
chr13	55364730	55364786	protein_coding	Nsd1	exon	ENSMUSG00000021488	ProperStrand	186	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.4075
chr10	77432754	77432770	protein_coding	Trpm2	intron	ENSMUSG00000009292	NonProperStrand	23	chr4	131865929	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.4190
chr5	132909648	132909664	protein_coding	Auts2	intron	ENSMUSG00000029673	NonProperStrand	37	chr4	128932601	128932625	protein_coding	C77080	intron	ENSMUSG00000050390	ProperStrand	48	1	-14.7388
chr16	87419194	87419220	snoRNA	ENSMUSG00000065647_SNORA2	.	ENSMUSG00000065647	ProperStrand	123	chr7	116664809	116664919	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-4.1714
chr12	85350481	85350499	protein_coding	Acot1	utr5	ENSMUSG00000072949	ProperStrand	72	chr18	35716804	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.8753
chr1	152270783	152270940	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	chr12	112779226	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-1.0485
chr10	77802718	77802734	protein_coding	Agpat3	intron	ENSMUSG00000001211	ProperStrand	22	chr10	127687104	127687122	protein_coding	Timeless	exon	ENSMUSG00000039994	ProperStrand	53	1	-15.5892
chr2	158185522	158185564	lincRNA	9430008C03Rik	exon	ENSMUSG00000085385	ProperStrand	1039	chr15	51714052	51714098	protein_coding	Utp23	utr3	ENSMUSG00000022313	ProperStrand	4	3	-20.0614
chr19	45825123	45842359	protein_coding	Mgea5	utr3	ENSMUSG00000025220	ProperStrand	53	chr4	131865947	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-3.5681
chr10	72119019	72119091	protein_coding	Zwint	exon	ENSMUSG00000019923	ProperStrand	22	chr7	116664815	116664905	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	6	-inf
chr17	51059907	51059923	protein_coding	Tbc1d5	exon	ENSMUSG00000023923	NonProperStrand	51	chr6	134097815	134097831	protein_coding	Etv6	intron	ENSMUSG00000030199	NonProperStrand	77	1	-13.1412
chr3	45780645	45780665	LINE	Lx2B	L1	chr3Lx2B45780445	ProperStrand	34	chr5	100855944	100855974	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	1	-7.7717
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chrX	40944841	40944857	protein_coding	Gm362	exon	ENSMUSG00000078320	ProperStrand	129	1	-6.2775
chr14	101804045	101804061	LINE	L1Md_F3	L1	chr14L1Md_F3101802411	NonProperStrand	1	chr2	179322380	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	1	-inf
chr17	56989248	56989265	protein_coding	Acsbg2	exon	ENSMUSG00000024207	NonProperStrand	6	chr5	111204100	111204191	protein_coding	Pus1	exon	ENSMUSG00000029507	ProperStrand	10	1	-19.0093
chr10	60692417	60692433	protein_coding	Adamts14	exon	ENSMUSG00000059901	NonProperStrand	127	chr14	76247711	76247759	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-2.8002
chr11	48619139	48619530	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	chr2	119285262	119285297	protein_coding	Ino80	intron	ENSMUSG00000034154	ProperStrand	54	1	-10.0092
chr9	64018339	64018429	protein_coding	Zwilch	intron	ENSMUSG00000032400	ProperStrand	29	chr2	32818825	32818905	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-6.9104
chr2	21102727	21110865	protein_coding	Enkur	exon	ENSMUSG00000026679	ProperStrand	3	chr16	23110852	23110932	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr7	29787367	29788135	protein_coding	Map4k1	exon	ENSMUSG00000037337	ProperStrand	31	chr16	23111694	23111784	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.0285
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr1	162966243	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-2.3526
chr3	53585654	53585734	LINE	MusHAL1	L1	chr3MusHAL153583942	ProperStrand	1	chr4	12035290	12035380	LINE	L1VL2	L1	chr4L1VL212034344	ProperStrand	1	1	-inf
chr2	163843536	163843592	protein_coding	Ywhab	utr3	ENSMUSG00000018326	ProperStrand	33	chr5	130300460	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	8	-19.8999
chr7	118214190	118214208	protein_coding	Eif4g2	utr3	ENSMUSG00000005610	NonProperStrand	30	chr11	55296208	55296274	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-7.5614
chr11	120645349	120645367	protein_coding	Rfng	exon	ENSMUSG00000025158	NonProperStrand	13	chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	1	-12.1796
chr5	74489202	74489292	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr12	110925009	110925062	snoRNA	ENSMUSG00000064726_SNORD113	.	ENSMUSG00000064726	ProperStrand	42	1	-6.3249
chr5	145941650	145941738	protein_coding	Cpsf4	intron	ENSMUSG00000029625	ProperStrand	15	chr12	55797769	55797859	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	2	-16.6230
chr3	151882957	151882985	protein_coding	Fubp1	exon	ENSMUSG00000028034	ProperStrand	56	chr5	111121096	111121186	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-6.5710
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr11	95629704	95629753	protein_coding	Zfp652	utr3	ENSMUSG00000075595	ProperStrand	48	1	-7.4723
chr11	97698752	97698795	protein_coding	Lasp1	utr3	ENSMUSG00000038366	ProperStrand	65	chr11	77995191	77995247	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-6.0250
chr5	37748675	37754757	protein_coding	Evc2	exon	ENSMUSG00000050248	ProperStrand	8	chr3	85942714	85942766	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	1	-13.8579
chr15	72888886	72888916	protein_coding	Trappc9	exon	ENSMUSG00000047921	ProperStrand	44	chr18	35716761	35716847	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-4.7280
chr5	123622050	123622066	protein_coding	Hpd	exon	ENSMUSG00000029445	ProperStrand	254	chr5	37187777	37187803	protein_coding	Mrfap1	exon	ENSMUSG00000055302	ProperStrand	62	1	-10.3544
chr1	51819416	51819432	protein_coding	Myo1b	exon	ENSMUSG00000018417	NonProperStrand	3	chr7	19599783	19599799	protein_coding	Foxa3	exon	ENSMUSG00000040891	NonProperStrand	1	1	-inf
chr7	151765212	151765228	antisense	Gm10574	.	ENSMUSG00000073778	ProperStrand	357	chr1	162966812	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-2.8843
chr11	6239221	6239869	protein_coding	Ogdh	exon	ENSMUSG00000020456	ProperStrand	42	chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	1	-10.1631
chr15	86065210	86065992	protein_coding	Tbc1d22a	exon	ENSMUSG00000051864	ProperStrand	15	chr13	51743567	51743661	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-9.6615
chr4	117553494	117553543	protein_coding	B4galt2	exon	ENSMUSG00000028541	ProperStrand	11	chr16	23111455	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.1830
chr10	106825141	106825157	protein_coding	Lin7a	intron	ENSMUSG00000019906	NonProperStrand	13	chr1	164603875	164603899	protein_coding	Prrc2c	intron	ENSMUSG00000040225	ProperStrand	413	1	-12.5655
chr2	129997677	129998352	protein_coding	Snrpb	exon	ENSMUSG00000027404	ProperStrand	21	chr16	23110455	23110508	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.3878
chr9	16658044	16658134	LTR	RLTR20B3	ERVK	chr9RLTR20B316657878	ProperStrand	1	chr9	16658274	16658354	SINE	B4	B4	chr9B416658213	ProperStrand	1	1	-inf
chr13	68759738	68764669	protein_coding	Adcy2	exon	ENSMUSG00000021536	ProperStrand	237	chr5	141111330	141111494	protein_coding	Ttyh3	exon	ENSMUSG00000036565	ProperStrand	22	1	-12.5910
chr8	113264157	113264199	protein_coding	Mtss1l	utr3	ENSMUSG00000033763	ProperStrand	12	chr13	24824232	24824248	protein_coding	Fam65b	utr3	ENSMUSG00000036006	ProperStrand	51	1	-16.9312
chr17	27890491	27890524	protein_coding	D17Wsu92e	utr3	ENSMUSG00000056692	ProperStrand	61	chr8	34802323	34802413	snoRNA	ENSMUSG00000088856_SNORA48	.	ENSMUSG00000088856	ProperStrand	236	9	-18.8577
chr2	179912989	179913109	protein_coding	Lama5	exon	ENSMUSG00000015647	NonProperStrand	11	chr5	74489638	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	NonProperStrand	5	1	-19.4286
chr4	44038356	44038372	protein_coding	Clta	exon	ENSMUSG00000028478	ProperStrand	59	chrX	71589885	71589904	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	2	-16.0442
chr12	68768901	68768991	LINE	L1Md_F2	L1	chr12L1Md_F268768613	ProperStrand	13	chr3	32683854	32683944	LINE	L1Md_F2	L1	chr3L1Md_F232683413	ProperStrand	1	1	-inf
chr14	31998225	31998502	protein_coding	Nisch	exon	ENSMUSG00000021910	ProperStrand	125	chr4	151504980	151505019	protein_coding	Espn	exon	ENSMUSG00000028943	ProperStrand	18	1	-14.2811
chr17	24363427	24363507	protein_coding	Ccnf	exon	ENSMUSG00000072082	ProperStrand	149	chr2	130101996	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-3.6259
chr5	130718352	130718397	protein_coding	0610007L01Rik	utr3	ENSMUSG00000053094	ProperStrand	39	chr1	162965536	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	4	-13.2787
chr19	5801893	5801973	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr17	57161326	57161416	protein_coding	Khsrp	utr3	ENSMUSG00000007670	ProperStrand	353	2	-6.8493
chr1	17082131	17087389	protein_coding	Jph1	exon	ENSMUSG00000042686	ProperStrand	39	chr8	32260359	32260439	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-5.4666
chr10	79173111	79173436	protein_coding	Bsg	exon	ENSMUSG00000023175	ProperStrand	107	chr12	60141415	60141495	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-5.6896
chr7	150238808	150253621	protein_coding	Cd81	utr5	ENSMUSG00000037706	ProperStrand	88	chr4	131865868	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-3.7198
chr1	93984779	93984805	protein_coding	Hdac4	intron	ENSMUSG00000026313	ProperStrand	27	chr19	8800086	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	4	-21.6128
chr5	138749768	138749858	protein_coding	Stag3	exon	ENSMUSG00000036928	ProperStrand	53	chr5	33186859	33186939	protein_coding	C330019G07Rik	exon	ENSMUSG00000054280	ProperStrand	22	1	-15.5939
chr9	15121060	15121093	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	chr10	39978307	39978397	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	5	-10.3742
chrX	20240149	20240166	protein_coding	Uba1	utr5	ENSMUSG00000001924	ProperStrand	156	chr9	40612830	40612885	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	2	-12.2101
chr1	95216633	95216666	protein_coding	Pask	exon	ENSMUSG00000026274	ProperStrand	20	chr5	115983444	115983460	protein_coding	Pxn	intron	ENSMUSG00000029528	ProperStrand	171	1	-13.4399
chr10	52157624	52157724	protein_coding	Nus1	utr3	ENSMUSG00000023068	ProperStrand	9	chr11	97642952	97642990	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	5	-20.8331
chr11	120459589	120459607	protein_coding	Alyref	exon	ENSMUSG00000025134	ProperStrand	53	chr1	141351453	141351469	protein_coding	Aspm	utr5	ENSMUSG00000033952	ProperStrand	64	1	-13.4345
chr1	28655226	28655245	LINE	L1_Mur3	L1	chr1L1_Mur328655040	NonProperStrand	1	chr11	6428059	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-inf
chr5	115225134	115225219	protein_coding	Ankrd13a	utr5	ENSMUSG00000041870	ProperStrand	22	chr19	8963027	8963043	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.0882
chr1	137336056	137336115	protein_coding	Nav1	utr3	ENSMUSG00000009418	ProperStrand	38	chr12	88778634	88778722	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-7.4074
chr19	27837820	27837836	protein_coding	Rfx3	utr3	ENSMUSG00000040929	ProperStrand	92	chr1	162965531	162965562	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.5208
chr17	39985045	39985089	pseudogene	AY036118	.	ENSMUSG00000045999	ProperStrand	57	chr12	112779146	112779246	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	NonProperStrand	10	1	-17.0534
chr9	108865312	108865936	protein_coding	Col7a1	exon	ENSMUSG00000025650	ProperStrand	33	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.7641
chr2	127034224	127034254	protein_coding	Snrnp200	utr5	ENSMUSG00000003660	ProperStrand	203	chr7	116664819	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	4	-3.8568
chr12	107923910	107923926	lincRNA	4933406K04Rik	exon	ENSMUSG00000085820	NonProperStrand	1	chr7	29136525	29136570	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-inf
chr3	22114965	22115046	protein_coding	Tbl1xr1	utr3	ENSMUSG00000027630	ProperStrand	44	chr12	110874223	110874291	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	1	-10.6026
chr13	68759738	68764669	protein_coding	Adcy2	exon	ENSMUSG00000021536	ProperStrand	237	chr9	120039595	120039614	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.1090
chr14	52816779	52816795	protein_coding	Supt16h	exon	ENSMUSG00000035726	ProperStrand	193	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-3.6089
chr18	16933117	16966848	protein_coding	Cdh2	exon	ENSMUSG00000024304	ProperStrand	71	chr6	97112905	97112941	snoRNA	ENSMUSG00000065728_SNORA36	.	ENSMUSG00000065728	ProperStrand	158	1	-11.0316
chr12	101153756	101173251	protein_coding	Tdp1	exon	ENSMUSG00000021177	ProperStrand	23	chr8	73419656	73419729	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-11.7914
chr2	121949510	121949528	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	chr7	116663680	116663758	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-1.0311
chr1	163606431	163606449	LTR	MER74B	ERVL	chr1MER74B163606256	NonProperStrand	1	chr15	34370618	34370665	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-inf
chr8	124817584	124817603	protein_coding	Zfpm1	intron	ENSMUSG00000049577	ProperStrand	24	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.0142
chr4	131908240	131908340	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	chr10	127895516	127895563	tRNA	tRNA688-SerCGA	.	1223316	ProperStrand	71	1	-1.1847
chr8	108734812	108734828	protein_coding	Slc7a6os	utr5	ENSMUSG00000033106	NonProperStrand	29	chr1	63225677	63225705	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-8.1227
chr12	86381559	86381596	protein_coding	Ylpm1	exon	ENSMUSG00000021244	ProperStrand	100	chr11	55296294	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-5.1808
chr17	34741745	34741763	protein_coding	Agpat1	intron	ENSMUSG00000034254	NonProperStrand	39	chr11	106362638	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-8.2669
chr11	32597170	32597192	protein_coding	Fbxw11	intron	ENSMUSG00000020271	NonProperStrand	31	chr7	63459856	63460055	protein_coding	Herc2	exon	ENSMUSG00000030451	ProperStrand	66	1	-14.4510
chr11	87794187	87794256	protein_coding	Dynll2	utr3	ENSMUSG00000020483	ProperStrand	22	chr16	23110494	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.2978
chr16	38158126	38158226	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	chr15	5068428	5068478	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	4	-7.0251
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr12	52472722	52473417	protein_coding	G2e3	exon	ENSMUSG00000035293	ProperStrand	53	1	-8.0433
chr8	96999676	96999692	lincRNA	Nlrc5	exon	ENSMUSG00000074151	NonProperStrand	25	chr7	123451772	123451801	protein_coding	Plekha7	exon	ENSMUSG00000045659	ProperStrand	66	1	-14.8923
chr14	71064983	71065103	protein_coding	Xpo7	utr3	ENSMUSG00000022100	ProperStrand	109	chr11	80176093	80176116	protein_coding	5730455P16Rik	utr3	ENSMUSG00000057181	ProperStrand	28	10	-18.9895
chr19	47314422	47314456	protein_coding	Neurl1a	exon	ENSMUSG00000006435	ProperStrand	41	chr11	97889675	97889741	protein_coding	Rpl19	exon	ENSMUSG00000017404	ProperStrand	120	1	-12.6911
chr19	8963188	8963215	miRNA	Mir5136	.	ENSMUSG00000093314	ProperStrand	45	chr11	78086787	78086944	protein_coding	2610507B11Rik	exon	ENSMUSG00000010277	ProperStrand	246	1	-11.0639
chr16	32243804	32243843	snoRNA	ENSMUSG00000080440_SNORA79	.	ENSMUSG00000080440	ProperStrand	140	chr2	130101259	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	3	-11.6244
chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	chr11	106362585	106362692	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-2.5331
chr11	62416953	62417024	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	chr8	73419650	73419775	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	22	-5.1192
chr3	144160305	144160329	protein_coding	Hs2st1	intron	ENSMUSG00000040151	ProperStrand	18	chr1	88201718	88201734	protein_coding	B3gnt7	exon	ENSMUSG00000079445	NonProperStrand	2	1	-inf
chr1	157924324	157924340	protein_coding	Fam163a	utr3	ENSMUSG00000015484	NonProperStrand	13	chr9	40610528	40610628	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	1	-11.2484
chr5	138608324	138608424	protein_coding	Mcm7	exon	ENSMUSG00000029730	ProperStrand	258	chr10	110918577	110918625	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-1.0917
chr10	23506278	23506348	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	11	-3.7011
chr2	90235308	90235345	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	136674344	136674363	protein_coding	Prkrip1	intron	ENSMUSG00000039737	NonProperStrand	30	1	-5.8128
chr11	53250623	53250640	protein_coding	Gdf9	exon	ENSMUSG00000018238	ProperStrand	1	chr12	17552949	17552982	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-inf
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr7	150717298	150717358	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	2	-3.4870
chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	chr9	65049529	65049610	snRNA	ENSMUSG00000075930_U5	.	ENSMUSG00000075930	ProperStrand	175	1	-7.4427
chr12	45730348	45730438	LINE	Lx4B	L1	chr12Lx4B45729587	NonProperStrand	1	chr4	15610268	15610358	LINE	Lx4B	L1	chr4Lx4B15609438	NonProperStrand	1	1	-inf
chr9	106584202	106584260	protein_coding	Tex264	exon	ENSMUSG00000040813	ProperStrand	18	chr4	131866180	131866270	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-5.9995
chr5	5322630	5322646	protein_coding	Cdk14	intron	ENSMUSG00000028926	ProperStrand	20	chr15	79908929	79908998	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-7.6621
chr9	120481300	120481889	protein_coding	Rpl14	exon	ENSMUSG00000025794	ProperStrand	123	chr1	162966812	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	2	-8.0207
chr17	66466612	66466688	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	chr19	9042768	9043655	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	1	-6.0376
chr9	15119967	15120038	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	chr15	34370545	34370636	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	9	-2.9602
chr11	97048734	97048869	protein_coding	Kpnb1	exon	ENSMUSG00000001440	ProperStrand	197	chr10	127020511	127020887	protein_coding	Lrp1	exon	ENSMUSG00000040249	NonProperStrand	24	1	-12.7832
chr9	57385425	57385441	protein_coding	2310046O06Rik	utr5	ENSMUSG00000032305	ProperStrand	135	chr19	8799581	8799638	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-5.1761
chr10	94252521	94252560	protein_coding	Ccdc41	utr3	ENSMUSG00000020024	ProperStrand	6	chr5	74489620	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-8.4105
chr9	103401280	103401296	protein_coding	Tmem108	exon	ENSMUSG00000042757	NonProperStrand	323	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-5.5943
chr11	69547727	69547747	protein_coding	Polr2a	utr3	ENSMUSG00000005198	ProperStrand	200	chr5	122580412	122584741	protein_coding	Ccdc63	utr5	ENSMUSG00000043036	ProperStrand	120	1	-9.5078
chr7	30231468	30231593	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	chr17	56753429	56753456	protein_coding	Rpl36	exon	ENSMUSG00000057863	ProperStrand	62	1	-8.7810
chr11	96769282	96769382	protein_coding	Cdk5rap3	utr3	ENSMUSG00000018669	ProperStrand	16	chr6	52589254	52589272	snoRNA	ENSMUSG00000064792_SNORA32	.	ENSMUSG00000064792	ProperStrand	151	1	-14.1489
chr6	69657216	69657233	LTR	IAPEz-int	ERVK	chr6IAPEz-int69657165	NonProperStrand	42	chr9	120038492	120038541	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.6915
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr19	8963023	8963183	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	8	-2.7859
chr14	20622358	20622402	protein_coding	Nid2	exon	ENSMUSG00000021806	ProperStrand	372	chr12	88778631	88778722	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-3.0265
chr14	100268028	100268050	SINE	MIRm	MIR	chr14MIRm100268000	NonProperStrand	1	chr19	8963079	8963169	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-inf
chr11	69137138	69137232	protein_coding	Cntrob	utr5	ENSMUSG00000032782	ProperStrand	19	chr9	15119722	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.7702
chr4	48598342	48598400	protein_coding	Tmeff1	exon	ENSMUSG00000028347	ProperStrand	47	chr4	131908236	131908298	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.7849
chr2	26493474	26493518	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr12	71347267	71347283	protein_coding	Trim9	utr3	ENSMUSG00000021071	NonProperStrand	75	1	-5.7558
chr19	16347550	16347570	protein_coding	Gnaq	intron	ENSMUSG00000024639	ProperStrand	38	chr8	129468745	129468881	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-5.2970
chr2	25383824	25385870	protein_coding	Traf2	exon	ENSMUSG00000026942	ProperStrand	3	chr10	110918550	110918640	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-9.6547
chr9	30966098	30966159	protein_coding	Aplp2	exon	ENSMUSG00000031996	ProperStrand	172	chr18	73693166	73693187	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	4	-11.6831
chr11	78076211	78076254	protein_coding	2610507B11Rik	exon	ENSMUSG00000010277	ProperStrand	246	chr17	35646139	35646173	protein_coding	Pou5f1	exon	ENSMUSG00000024406	ProperStrand	104	1	-9.3809
chr8	73051744	73051761	protein_coding	Fkbp8	utr5	ENSMUSG00000019428	ProperStrand	52	chr9	78326996	78327143	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-6.6177
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr16	23111373	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	6	-1.7934
chr7	116663646	116663749	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	chr10	127895517	127895568	tRNA	tRNA688-SerCGA	.	721602	ProperStrand	71	1	-2.2277
chr16	56035865	56035965	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	chr19	8800355	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	4	-2.4077
chr19	5685774	5685864	protein_coding	Pcnxl3	exon	ENSMUSG00000054874	ProperStrand	96	chr9	120039567	120039647	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-4.3844
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	4	-9.2927
chr2	73747430	73747956	protein_coding	Atp5g3	exon	ENSMUSG00000018770	ProperStrand	41	chr4	131908299	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-3.6365
chr12	81971193	81978226	protein_coding	4933426M11Rik	utr3	ENSMUSG00000021133	ProperStrand	23	chr2	26494709	26494834	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	4	-15.5523
chr10	84185225	84185295	protein_coding	Polr3b	intron	ENSMUSG00000034453	ProperStrand	41	chr11	69483195	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.1191
chr7	134852253	134852270	protein_coding	Bcl7c	utr5	ENSMUSG00000030814	ProperStrand	15	chr16	23111454	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.5828
chr7	17501413	17501513	protein_coding	Calm3	utr3	ENSMUSG00000019370	ProperStrand	28	chr19	9043976	9044342	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	1	-11.0037
chr11	80080114	80080131	protein_coding	Rhot1	utr3	ENSMUSG00000017686	NonProperStrand	48	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.1244
chr19	53985583	53985628	protein_coding	Pdcd4	intron	ENSMUSG00000024975	ProperStrand	21	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-9.8459
chr15	79078613	79078660	protein_coding	Pick1	exon	ENSMUSG00000068206	ProperStrand	21	chr7	29136541	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	6	-19.7529
chr14	80261837	80262525	lincRNA	Gm6999	intron	ENSMUSG00000075495	ProperStrand	265	chr16	23111723	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	9	-6.8611
chr9	15119968	15120042	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	chr11	83107853	83107902	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	1	-2.9743
chr11	102339835	102339925	protein_coding	Gpatch8	exon	ENSMUSG00000034621	ProperStrand	49	chr18	33954824	33954904	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-3.8820
chr10	77874206	77875593	protein_coding	Rrp1	exon	ENSMUSG00000061032	ProperStrand	177	chr19	8800355	8800445	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	5	-8.7719
chr4	149022232	149022332	protein_coding	Clstn1	utr3	ENSMUSG00000039953	ProperStrand	173	chr16	23110533	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-0.8941
chr5	29896507	29896597	protein_coding	Ube3c	intron	ENSMUSG00000039000	ProperStrand	48	chr9	120038589	120038669	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-5.8809
chr6	108768248	108768578	protein_coding	Arl8b	exon	ENSMUSG00000030105	ProperStrand	28	chr1	162968213	162968267	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-8.3434
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	21766154	21766172	protein_coding	Epor	exon	ENSMUSG00000006235	NonProperStrand	4	1	-10.0500
chr18	10052128	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chrX	71517837	71517953	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	4	-8.4653
chr11	69812086	69812176	protein_coding	Phf23	exon	ENSMUSG00000018572	ProperStrand	25	chr18	33954848	33954928	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-5.1772
chr1	165861353	165861369	protein_coding	Scyl3	intron	ENSMUSG00000026584	NonProperStrand	5	chr7	51505822	51505841	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	1	-13.7745
chr11	83587441	83587952	protein_coding	Heatr6	exon	ENSMUSG00000000976	ProperStrand	67	chr7	29136629	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	4	-8.1541
chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	chr19	8800356	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-2.4844
chr9	81949792	81949813	protein_coding	Mei4	intron	ENSMUSG00000043289	NonProperStrand	42	chr4	110630646	110630663	protein_coding	Agbl4	intron	ENSMUSG00000061298	NonProperStrand	33	1	-15.2280
chr9	20946705	20946880	protein_coding	Cdc37	exon	ENSMUSG00000019471	ProperStrand	97	chr3	123210870	123210987	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-2.5422
chr6	97434587	97434614	protein_coding	Frmd4b	intron	ENSMUSG00000030064	ProperStrand	13	chr16	23110828	23110877	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.3283
chr10	80640828	80644135	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr16	23111689	23111837	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	48	-10.7899
chr8	112379514	112379548	protein_coding	Ap1g1	exon	ENSMUSG00000031731	ProperStrand	22	chr11	62416603	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-11.5475
chr18	38610730	38610748	protein_coding	Ndfip1	intron	ENSMUSG00000024425	ProperStrand	42	chr9	65442742	65442762	protein_coding	Pif1	utr3	ENSMUSG00000041064	ProperStrand	14	1	-17.1203
chr10	79173556	79173582	protein_coding	Bsg	exon	ENSMUSG00000023175	ProperStrand	107	chr1	162965548	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-4.0344
chr17	47625766	47625828	protein_coding	Taf8	utr3	ENSMUSG00000023980	ProperStrand	25	chr11	62416593	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-6.8981
chr11	59025867	59025983	protein_coding	Arf1	utr3	ENSMUSG00000048076	ProperStrand	52	chr17	24665481	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-5.2185
chr15	83410979	83411059	protein_coding	Ttll12	exon	ENSMUSG00000016757	ProperStrand	36	chr12	106269344	106269434	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-5.1229
chr5	115924521	115924539	protein_coding	Pla2g1b	exon	ENSMUSG00000029522	NonProperStrand	1	chr16	11144142	11144232	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	1	-inf
chr5	142936522	142936612	protein_coding	Foxk1	utr3	ENSMUSG00000056493	ProperStrand	19	chr3	68889197	68889277	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-5.4553
chr4	43505656	43505721	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chrX	131293123	131293140	protein_coding	Armcx3	utr5	ENSMUSG00000049047	NonProperStrand	5	1	-8.0398
chr10	18393547	18393563	protein_coding	D10Bwg1379e	intron	ENSMUSG00000019852	NonProperStrand	120	chr19	8799581	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-5.4045
chr1	88252857	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	chr10	23506278	23506321	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-1.0110
chr8	86770153	86770202	protein_coding	D8Ertd738e	utr3	ENSMUSG00000019362	ProperStrand	7	chr4	131908236	131908283	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-5.3201
chr14	76245139	76247737	protein_coding	Tpt1	intron	ENSMUSG00000060126	ProperStrand	236	chr5	130300442	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	9	-10.7168
chr18	65740036	65740055	protein_coding	Zfp532	utr5	ENSMUSG00000042439	NonProperStrand	8	chr16	23110962	23110999	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.2180
chr11	94225666	94226089	protein_coding	Abcc3	exon	ENSMUSG00000020865	NonProperStrand	1	chr11	94243397	94243477	protein_coding	Abcc3	intron	ENSMUSG00000020865	ProperStrand	2	1	-inf
chr2	90235299	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	5283718	5283899	protein_coding	Sf3b2	exon	ENSMUSG00000024853	ProperStrand	102	1	-3.4684
chr11	3870152	3870169	protein_coding	Pes1	intron	ENSMUSG00000020430	ProperStrand	49	chr11	102171080	102171215	protein_coding	Ubtf	exon	ENSMUSG00000020923	ProperStrand	66	1	-13.5339
chr10	5993020	5993067	protein_coding	Akap12	exon	ENSMUSG00000038587	ProperStrand	1008	chr1	89681328	89681396	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-0.7253
chr8	26881569	26881659	protein_coding	Bag4	exon	ENSMUSG00000037316	ProperStrand	10	chr19	8963084	8963164	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.6521
chr1	20802201	20802646	protein_coding	Mcm3	exon	ENSMUSG00000041859	ProperStrand	142	chr11	6519849	6519911	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-6.2345
chr5	124860215	124860242	protein_coding	Sbno1	exon	ENSMUSG00000038095	ProperStrand	134	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.7010
chr14	15572351	15572370	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-5.7286
chr11	77969503	77969541	protein_coding	BC017647	utr3	ENSMUSG00000037750	ProperStrand	19	chr7	134341340	134341357	protein_coding	Tbc1d10b	utr3	ENSMUSG00000042492	ProperStrand	187	1	-13.3687
chr2	90235316	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	96067564	96067581	LTR	RMER19B	ERVK	chr10RMER19B96067159	ProperStrand	12	1	-7.6663
chr2	84284273	84284974	protein_coding	Tfpi	exon	ENSMUSG00000027082	ProperStrand	9	chr16	23111770	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.4225
chr1	20803136	20803188	protein_coding	Mcm3	exon	ENSMUSG00000041859	ProperStrand	142	chr9	15119724	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-2.4355
chr19	40194255	40194390	LINE	Lx2	L1	chr19Lx240189486	ProperStrand	24	chr4	131908687	131908808	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-4.7206
chr2	90235315	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	ProperStrand	24	chr9	120038567	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	NonProperStrand	28	1	-16.6724
chr8	26827480	26827580	protein_coding	Whsc1l1	utr3	ENSMUSG00000054823	ProperStrand	36	chr4	122968666	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-7.2971
chr9	3023498	3023588	lincRNA	Gm16869	intron	ENSMUSG00000087580	ProperStrand	1	chr2	98507258	98507348	protein_coding	Gm10800	exon	ENSMUSG00000075014	NonProperStrand	12	1	-inf
chr4	107440276	107440293	lincRNA	Gm12907	intron	ENSMUSG00000087195	NonProperStrand	18	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-11.0322
chr4	117569416	117569511	protein_coding	Ipo13	intron	ENSMUSG00000033365	ProperStrand	48	chr16	23111703	23111740	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.2671
chr18	65578204	65578284	LINE	L1MB3	L1	chr18L1MB365578120	NonProperStrand	1	chr18	65578461	65578551	LINE	L1MB3	L1	chr18L1MB365578454	NonProperStrand	1	1	-inf
chr19	43574922	43590263	protein_coding	Got1	exon	ENSMUSG00000025190	ProperStrand	32	chr16	23110962	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-4.6769
chr5	81522762	81522780	protein_coding	Lphn3	intron	ENSMUSG00000037605	NonProperStrand	39	chr4	131908357	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-3.7675
chr14	77424372	77424388	protein_coding	9030625A04Rik	utr3	ENSMUSG00000044350	NonProperStrand	152	chr1	89681354	89681396	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-3.6693
chr16	36071984	36072000	protein_coding	Ccdc58	utr5	ENSMUSG00000075229	NonProperStrand	55	chr9	120038553	120038607	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.1957
chr1	57425979	57425997	lincRNA	4930558J18Rik	intron	ENSMUSG00000084958	NonProperStrand	28	chr10	23505193	23505235	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.4185
chr1	33828651	33828669	protein_coding	Zfp451	intron	ENSMUSG00000042197	NonProperStrand	393	chr11	62416951	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-2.5270
chr9	57809132	57809149	protein_coding	Sema7a	exon	ENSMUSG00000038264	ProperStrand	43	chr3	94685071	94685111	protein_coding	Pogz	utr3	ENSMUSG00000038902	ProperStrand	65	1	-13.8300
chr14	72989760	72989787	protein_coding	Fndc3a	exon	ENSMUSG00000033487	ProperStrand	84	chr18	35714186	35714262	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-2.8375
chr15	101024577	101025284	protein_coding	Acvr1b	exon	ENSMUSG00000000532	ProperStrand	259	chr9	15119290	15119380	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-2.4187
chr3	90197173	90197671	protein_coding	Ints3	exon	ENSMUSG00000027933	ProperStrand	87	chr19	8799580	8799644	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-6.0329
chr12	106873222	106873943	protein_coding	Atg2b	exon	ENSMUSG00000041341	ProperStrand	67	chr9	120039583	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.1188
chr11	99885311	99885327	protein_coding	Krt33b	exon	ENSMUSG00000057723	NonProperStrand	352	chr7	117189863	117189931	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	4	-9.9293
chr5	23825941	23825957	protein_coding	Kcnh2	exon	ENSMUSG00000038319	ProperStrand	242	chr4	116826698	116826768	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	2	-6.8265
chr19	8963032	8963048	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	chr5	108336363	108336407	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-2.0371
chr1	91441812	91441829	protein_coding	Agap1	intron	ENSMUSG00000055013	NonProperStrand	32	chr11	35380172	35380189	protein_coding	Slit3	intron	ENSMUSG00000056427	ProperStrand	61	1	-14.5470
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr16	90386834	90386852	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	1	-7.5078
chr4	46548842	46548858	lincRNA	Gm16731	exon	ENSMUSG00000085990	ProperStrand	7	chr5	108334195	108334247	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-9.1759
chr14	71451587	71451667	LTR	MT2A	ERVL	chr14MT2A71451564	ProperStrand	1	chr14	71451371	71451461	LTR	MTD	MaLR	chr14MTD71451207	NonProperStrand	1	1	-inf
chr15	81560306	81560322	protein_coding	Rangap1	utr5	ENSMUSG00000022391	NonProperStrand	35	chr8	32260331	32260424	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-5.6795
chr6	61280218	61280237	protein_coding	Fam190a	intron	ENSMUSG00000039578	NonProperStrand	24	chr1	185857228	185857244	protein_coding	1700056E22Rik	exon	ENSMUSG00000044854	ProperStrand	173	1	-13.0461
chr4	138847132	138847149	protein_coding	Capzb	utr3	ENSMUSG00000028745	NonProperStrand	21	chr15	34370624	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-5.5683
chr17	35226531	35226548	protein_coding	Abhd16a	intron	ENSMUSG00000007036	ProperStrand	2	chr11	55296208	55296333	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-13.6189
chr1	133826281	133827642	protein_coding	Nucks1	exon	ENSMUSG00000026434	ProperStrand	59	chr4	131908810	131908890	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-7.2948
chr14	76956323	76956339	protein_coding	Serp2	utr5	ENSMUSG00000052584	NonProperStrand	41	chr11	97643003	97643060	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.1423
chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	chr10	75322139	75322190	protein_coding	Mif	utr3	ENSMUSG00000033307	ProperStrand	146	1	-7.6214
chr5	103431794	103431812	protein_coding	Mapk10	intron	ENSMUSG00000046709	ProperStrand	18	chr4	131865855	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-6.6051
chr2	166890532	166890581	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	chr3	95980283	95980321	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-1.5861
chr17	62956666	62956683	protein_coding	Efna5	utr3	ENSMUSG00000048915	NonProperStrand	32	chr3	88715213	88715230	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-8.4943
chr13	6604242	6604896	protein_coding	Pfkp	exon	ENSMUSG00000021196	ProperStrand	197	chr6	124910178	124911207	protein_coding	Cops7a	exon	ENSMUSG00000030127	ProperStrand	16	1	-13.6164
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	192712615	192712631	protein_coding	Rps6kc1	exon	ENSMUSG00000089872	ProperStrand	241	6	-12.2048
chr4	123087220	123171189	protein_coding	Macf1	intron	ENSMUSG00000028649	ProperStrand	320	chr16	23110525	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-0.7342
chr9	39358287	39358304	protein_coding	Olfr958	exon	ENSMUSG00000050853	NonProperStrand	266	chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	1	-8.4541
chr9	78215533	78215594	protein_coding	Dppa5a	exon	ENSMUSG00000060461	ProperStrand	79	chr4	131865966	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.3598
chr10	82153240	82153257	protein_coding	Glt8d2	utr5	ENSMUSG00000020251	NonProperStrand	24	chr6	7625293	7625367	protein_coding	Asns	utr3	ENSMUSG00000029752	ProperStrand	59	1	-15.2067
chr7	126929856	126929906	protein_coding	Eri2	exon	ENSMUSG00000030929	ProperStrand	6	chr17	35089181	35089212	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-10.1991
chr2	32819271	32819320	protein_coding	Rpl12	exon	ENSMUSG00000038900	ProperStrand	167	chr7	116664820	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-1.9751
chr9	56775853	56775870	protein_coding	Snx33	utr5	ENSMUSG00000032733	NonProperStrand	116	chr5	121655029	121655097	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.5638
chr19	6058318	6058510	protein_coding	Fau	exon	ENSMUSG00000038274	ProperStrand	64	chr16	76403822	76403904	protein_coding	Gm9843	utr5	ENSMUSG00000050299	ProperStrand	1	1	-inf
chr17	28465943	28465960	protein_coding	Rpl10a	exon	ENSMUSG00000037805	ProperStrand	121	chr18	35716765	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-5.0228
chr11	52954483	52954501	protein_coding	Fstl4	intron	ENSMUSG00000036264	ProperStrand	27	chr11	69483195	69483237	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.8930
chr10	75390212	75391101	protein_coding	Mmp11	exon	ENSMUSG00000000901	ProperStrand	24	chr7	116664811	116664870	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-4.2269
chr9	104218697	104218714	protein_coding	Acpp	intron	ENSMUSG00000032561	ProperStrand	17	chr16	23111447	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.3471
chr14	13326355	13326373	protein_coding	Cadps	intron	ENSMUSG00000054423	ProperStrand	32	chr11	69483136	69483272	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	4	-12.0178
chr2	131879736	131879753	protein_coding	Slc23a2	utr3	ENSMUSG00000027340	ProperStrand	44	chr4	131908236	131908301	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-3.4538
chr9	40612413	40612615	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr1	66521957	66521973	protein_coding	Unc80	intron	ENSMUSG00000055567	NonProperStrand	212	1	-5.6436
chr1	39596738	39596774	protein_coding	D1Bwg0212e	exon	ENSMUSG00000003135	ProperStrand	7	chr4	131865933	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.7768
chr2	150018357	150018447	protein_coding	Gm14139	exon	ENSMUSG00000079009	ProperStrand	1	chr3	123210854	123210934	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-inf
chr7	13615929	13616053	protein_coding	Trim28	exon	ENSMUSG00000005566	ProperStrand	296	chr15	74349457	74349475	protein_coding	Bai1	intron	ENSMUSG00000034730	NonProperStrand	56	1	-10.2534
chr11	69483213	69483293	protein_coding-noncoding	Eif4a1	utr3	ENSMUSG00000059796	ProperStrand	68	chr5	139713851	139714846	protein_coding	Sun1	exon	ENSMUSG00000036817	ProperStrand	108	1	-11.8806
chr4	140723745	140723761	protein_coding	Fbxo42	exon	ENSMUSG00000028920	ProperStrand	91	chr11	68887040	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-3.3697
chr15	84928410	84937422	protein_coding	Smc1b	exon	ENSMUSG00000022432	ProperStrand	11	chr11	62416633	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-8.5772
chr1	59748830	59748857	snoRNA	ENSMUSG00000077345_Snord70	.	ENSMUSG00000077345	ProperStrand	61	chr3	123210877	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.0395
chr3	82816758	82816774	protein_coding	Fgg	exon	ENSMUSG00000033860	NonProperStrand	321	chr13	12701288	12701388	protein_coding	Ero1lb	utr3	ENSMUSG00000057069	ProperStrand	15	1	-12.7731
chr7	88738700	88738790	protein_coding	Whamm	exon	ENSMUSG00000045795	ProperStrand	7	chr16	23110905	23110985	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.4785
chr8	113565524	113565563	protein_coding	Aars	exon	ENSMUSG00000031960	ProperStrand	355	chr11	89897732	89897748	protein_coding	Tmem100	utr3	ENSMUSG00000069763	ProperStrand	3	1	-16.1721
chr18	38610978	38611078	protein_coding	Ndfip1	intron	ENSMUSG00000024425	ProperStrand	42	chr7	150717310	150717348	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-6.2088
chr2	31072325	31072432	protein_coding	Gpr107	utr3	ENSMUSG00000000194	ProperStrand	99	chr4	140121138	140121154	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	3	-20.5956
chr3	151882676	151882776	protein_coding	Fubp1	exon	ENSMUSG00000028034	ProperStrand	56	chr9	95524995	95525035	snoRNA	ENSMUSG00000065346_SNORA4	.	ENSMUSG00000065346	ProperStrand	142	1	-11.7233
chr9	114422051	114422132	protein_coding	Trim71	exon	ENSMUSG00000079259	ProperStrand	162	chr11	69481412	69481431	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	5	-8.2831
chr2	158185576	158185653	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr11	48615539	48615576	snoRNA	ENSMUSG00000064725_Snord96a	.	ENSMUSG00000064725	ProperStrand	89	1	-5.7100
chr8	108233712	108233730	protein_coding	4933405L10Rik	exon	ENSMUSG00000013158	ProperStrand	94	chr5	108334204	108334260	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	3	-9.6562
chr9	65498423	65498774	protein_coding	Rbpms2	exon	ENSMUSG00000032387	ProperStrand	85	chr1	162965536	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.6570
chr13	58503699	58503716	protein_coding	Hnrnpk	intron	ENSMUSG00000021546	NonProperStrand	13	chr18	38118358	38118420	protein_coding	Fchsd1	utr3	ENSMUSG00000038524	ProperStrand	6	1	-19.5123
chr16	33244794	33244831	Other	RMER1A	Other	chr16RMER1A33243894	ProperStrand	1	chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	1	-inf
chr17	39985568	39985607	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr3	95980364	95980410	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	2	-1.2047
chr11	115935746	115937022	protein_coding	Unc13d	exon	ENSMUSG00000057948	ProperStrand	89	chr16	23111374	23111429	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.7670
chr4	137308586	137309826	protein_coding	Alpl	exon	ENSMUSG00000028766	ProperStrand	80	chr9	15118533	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	15	-21.2171
chr3	32363722	32363738	protein_coding	Pik3ca	utr3	ENSMUSG00000027665	ProperStrand	23	chr9	107536048	107536148	protein_coding	Gnai2	intron	ENSMUSG00000032562	ProperStrand	29	1	-16.7338
chr7	136800631	136800649	SINE	RSINE1	B4	chr7RSINE1136800606	ProperStrand	216	chr7	52381737	52381758	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	2	-8.3157
chr7	89800069	89800122	protein_coding	Eftud1	intron	ENSMUSG00000038563	ProperStrand	12	chr11	97643000	97643090	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-13.1361
chr12	3905977	3906004	protein_coding	Dnmt3a	intron	ENSMUSG00000020661	ProperStrand	40	chr10	87882201	87882244	protein_coding	Gnptab	exon	ENSMUSG00000035311	ProperStrand	65	1	-13.9748
chr3	138122689	138122779	protein_coding	Metap1	utr3	ENSMUSG00000005813	ProperStrand	9	chr18	35714196	35714276	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-7.1819
chr17	36097663	36097764	protein_coding	Abcf1	exon	ENSMUSG00000038762	ProperStrand	206	chr8	95505795	95505812	protein_coding	Slc6a2	exon	ENSMUSG00000055368	NonProperStrand	21	1	-12.9669
chr7	35132998	35136391	protein_coding	Lsm14a	exon	ENSMUSG00000066568	ProperStrand	31	chr7	116663655	116663735	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.7004
chr15	43699138	43699155	protein_coding	Tmem74	exon	ENSMUSG00000054409	ProperStrand	5	chr13	53073980	53073997	protein_coding	Nfil3	intron	ENSMUSG00000056749	NonProperStrand	66	1	-18.0400
chr2	90235285	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	23960766	23960782	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	1	-2.7776
chr1	95702627	95702691	protein_coding	Ing5	exon	ENSMUSG00000026283	ProperStrand	16	chr19	8799854	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	2	-12.2105
chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	chr4	128788769	128788786	protein_coding	Tmem54	utr3	ENSMUSG00000028786	NonProperStrand	6	1	-13.8268
chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	chr4	121870886	122132510	pseudogene	Gm12896	.	ENSMUSG00000083558	NonProperStrand	19	2	-17.5918
chr4	115484059	115484084	protein_coding	Atpaf1	utr3	ENSMUSG00000028710	ProperStrand	202	chr2	144087381	144087448	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-4.1917
chr4	25933510	25933590	LINE	L1_Mus1	L1	chr4L1_Mus125933134	ProperStrand	1	chr4	25933710	25933800	LINE	L1_Mus1	L1	chr4L1_Mus125933654	ProperStrand	1	1	-inf
chr6	77108138	77108156	protein_coding	Ctnna2	intron	ENSMUSG00000063063	NonProperStrand	9	chr19	8798743	8798812	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-8.6202
chr8	87366644	87366734	protein_coding	Calr	exon	ENSMUSG00000003814	ProperStrand	232	chr12	106269474	106269554	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-1.7745
chr12	109842170	109842188	protein_coding	Evl	intron	ENSMUSG00000021262	NonProperStrand	6	chr7	16524110	16524136	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	1	-14.4813
chr7	6265025	6265042	SINE	RSINE1	B4	chr7RSINE16265009	NonProperStrand	7	chr5	121655100	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-8.0440
chr7	31362377	31371896	protein_coding	Wbp7	exon	ENSMUSG00000006307	ProperStrand	180	chr16	23110851	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	11	-2.6756
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr13	110640471	110640488	protein_coding	Pde4d	intron	ENSMUSG00000021699	ProperStrand	92	1	-6.9448
chr1	175847218	175847235	protein_coding	Mndal	intron	ENSMUSG00000090272	NonProperStrand	1	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr19	8963027	8963127	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	chr12	60774058	60774110	snoRNA	ENSMUSG00000077603_SNORA3	.	ENSMUSG00000077603	ProperStrand	185	1	-0.6940
chr9	120860070	120860125	protein_coding	Ctnnb1	exon	ENSMUSG00000006932	ProperStrand	214	chr2	172759405	172759423	protein_coding	Bmp7	intron	ENSMUSG00000008999	NonProperStrand	10	1	-14.4287
chr2	126183962	126184507	protein_coding	Atp8b4	exon	ENSMUSG00000060131	NonProperStrand	3	chr7	118219582	118219640	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-10.4323
chr11	3102744	3102763	protein_coding	Drg1	intron	ENSMUSG00000020457	ProperStrand	19	chr9	64022789	64023062	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	1	-11.0081
chr16	93872256	93872275	protein_coding	Morc3	intron	ENSMUSG00000039456	NonProperStrand	33	chr4	131865409	131865509	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-5.1508
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr1	16092785	16093387	protein_coding	Rpl7	exon	ENSMUSG00000043716	ProperStrand	93	3	-14.1259
chr19	56003755	56003771	protein_coding	Tcf7l2	intron	ENSMUSG00000024985	ProperStrand	103	chr11	70783397	70783456	protein_coding	Nup88	utr5	ENSMUSG00000040667	ProperStrand	17	1	-14.7950
chr6	4704802	4704902	protein_coding	Peg10	exon	ENSMUSG00000092035	ProperStrand	102	chr1	162965555	162965587	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.3459
chr19	9052158	9052197	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	chr8	73419654	73419709	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-0.9298
chr5	93616713	93616791	protein_coding	Ccni	exon	ENSMUSG00000063015	ProperStrand	43	chr17	13112470	13112560	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	3	-12.2788
chr1	95263746	95263763	protein_coding	Ppp1r7	utr3	ENSMUSG00000026275	ProperStrand	44	chr9	120039533	120039570	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-6.5719
chr7	73018495	73018545	protein_coding	Pcsk6	intron	ENSMUSG00000030513	ProperStrand	32	chr16	23111759	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.9714
chr6	112689098	112689322	protein_coding	Srgap3	exon	ENSMUSG00000030257	NonProperStrand	208	chrX	84483704	84483738	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-5.7886
chr3	116605288	116605309	protein_coding	Frrs1	exon	ENSMUSG00000033386	ProperStrand	27	chr4	131865856	131865946	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-5.4115
chr2	71279281	71279321	protein_coding	Hat1	exon	ENSMUSG00000027018	ProperStrand	53	chrX	71673428	71674171	protein_coding	G6pdx	utr5	ENSMUSG00000031400	ProperStrand	16	4	-22.3710
chr11	98855573	98855673	protein_coding	Top2a	exon	ENSMUSG00000020914	ProperStrand	324	chr19	8799847	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-1.9151
chr12	60575476	60575494	LINE	L1_Mus4	L1	chr12L1_Mus460575423	ProperStrand	33	chr11	106362637	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-8.6034
chr11	63885336	63887052	protein_coding	Cox10	exon	ENSMUSG00000042148	NonProperStrand	187	chr11	62416605	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-3.0359
chr6	131330290	131330414	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	ProperStrand	408	chr18	35716740	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-1.0265
chr11	97489600	97489617	protein_coding	E130012A19Rik	exon	ENSMUSG00000043439	NonProperStrand	110	chr11	69481388	69481433	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-2.1512
chr17	26069175	26071791	protein_coding	Pigq	exon	ENSMUSG00000025728	ProperStrand	26	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-6.8539
chr1	71674699	71675009	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	2	-3.3646
chr2	23011328	23011344	protein_coding	Mastl	exon	ENSMUSG00000026779	ProperStrand	60	chr8	87579335	87579492	protein_coding	Tnpo2	utr3	ENSMUSG00000031691	ProperStrand	92	2	-19.7970
chr3	125593305	125593325	protein_coding	Ugt8a	intron	ENSMUSG00000032854	ProperStrand	16	chrX	45475094	45475112	protein_coding	Xpnpep2	exon	ENSMUSG00000037005	ProperStrand	32	1	-17.2974
chr15	44504363	44504384	protein_coding	Sybu	exon	ENSMUSG00000022340	NonProperStrand	28	chr2	145077955	145209255	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-9.2565
chr12	110888855	110888882	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr3	33712110	33713115	protein_coding	Ccdc39	exon	ENSMUSG00000027676	ProperStrand	106	1	-7.5305
chr12	111759142	111808945	protein_coding	Ppp2r5c	utr3	ENSMUSG00000017843	ProperStrand	36	chr4	131908236	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-3.9799
chr4	131908974	131909005	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr7	108971290	108971306	protein_coding	Inppl1	utr3	ENSMUSG00000032737	ProperStrand	272	1	-4.3127
chr3	51278408	51278465	protein_coding	Naa15	utr3	ENSMUSG00000063273	ProperStrand	34	chr4	131908689	131908768	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.0811
chr13	108661148	108661250	protein_coding	Zswim6	intron	ENSMUSG00000032846	ProperStrand	23	chr8	129468745	129468798	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-6.2916
chr11	60545009	60545112	protein_coding	Smcr7	exon	ENSMUSG00000018599	ProperStrand	6	chr1	162967530	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-8.0824
chr11	43248430	43248520	protein_coding	Slu7	intron	ENSMUSG00000020409	ProperStrand	7	chr9	15119322	15119402	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-9.4755
chrX	138824926	138825007	protein_coding	Acsl4	utr5	ENSMUSG00000031278	ProperStrand	31	chr1	89673621	89673711	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-4.5026
chr10	44973127	44973207	LINE	L1Md_F2	L1	chr10L1Md_F244972692	NonProperStrand	1	chr2	7370658	7370748	LINE	L1_Mus1	L1	chr2L1_Mus17370312	NonProperStrand	1	1	-inf
chr5	121655016	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	chr5	147646734	147646851	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	5	-2.0091
chr2	121949511	121949528	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	chr8	129468746	129468868	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	5	-9.0262
chr8	94528679	94528698	LTR	RLTR20B3	ERVK	chr8RLTR20B394528403	ProperStrand	12	chr16	23110828	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.4686
chr1	182837770	182837870	protein_coding	Pycr2	utr3	ENSMUSG00000026520	ProperStrand	89	chr9	70428668	70429132	protein_coding	Sltm	utr3	ENSMUSG00000032212	ProperStrand	13	1	-15.6512
chr18	75161566	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	chr2	130101241	130101308	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	3	-3.5319
chr8	73419657	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	chr3	95980285	95980375	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	15	-4.3792
chr10	92922625	92922646	protein_coding	Lta4h	exon	ENSMUSG00000015889	ProperStrand	12	chr19	12870380	12870426	protein_coding	Zfp91	utr5	ENSMUSG00000024695	ProperStrand	16	1	-19.5274
chr18	78016335	78020598	protein_coding	Atp5a1	exon	ENSMUSG00000025428	ProperStrand	254	chr4	131908688	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-1.1738
chr19	7103244	7103304	protein_coding	Stip1	intron	ENSMUSG00000024966	ProperStrand	100	chr2	167515426	167515443	protein_coding	Cebpb	utr3	ENSMUSG00000056501	ProperStrand	6	3	-20.1879
chr17	46824271	46824427	protein_coding	Ppp2r5d	exon	ENSMUSG00000059409	ProperStrand	97	chr6	71832550	71832577	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	3	-11.1184
chr6	140811771	140811861	LINE	Lx	L1	chr6Lx140807984	ProperStrand	1	chr7	54441763	54441843	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-inf
chr7	34987370	34987436	protein_coding	Gpi1	utr3	ENSMUSG00000036427	ProperStrand	288	chr15	71624775	71624797	snoRNA	ENSMUSG00000088895_SNORA81	.	ENSMUSG00000088895	ProperStrand	348	1	-6.6679
chr7	136800631	136800649	SINE	RSINE1	B4	chr7RSINE1136800606	ProperStrand	216	chrX	84483702	84483718	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-5.7150
chr7	52382234	52382333	protein_coding-noncoding	Rpl13a	utr3	ENSMUSG00000074129	ProperStrand	106	chr10	110918673	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-2.4409
chr4	21606097	21606114	protein_coding	Prdm13	exon	ENSMUSG00000040478	ProperStrand	51	chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	1	-8.9191
chr2	126638710	126638728	protein_coding	Trpm7	exon	ENSMUSG00000027365	NonProperStrand	4	chr3	116298267	116298284	protein_coding	Sass6	intron	ENSMUSG00000027959	ProperStrand	10	1	-19.3291
chr18	78229917	78229935	protein_coding	5430411K18Rik	utr3	ENSMUSG00000039840	NonProperStrand	6	chr5	147646042	147646075	protein_coding	Rpl21	exon	ENSMUSG00000041453	ProperStrand	112	1	-16.8013
chr11	117631826	117632023	protein_coding	Tmc6	exon	ENSMUSG00000025572	ProperStrand	60	chr2	79843543	79843559	protein_coding	Pde1a	intron	ENSMUSG00000059173	NonProperStrand	275	1	-10.2617
chr1	162968230	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	3	-1.1438
chr13	19684241	19684258	protein_coding	Epdr1	utr3	ENSMUSG00000002808	ProperStrand	46	chr15	95803551	95803567	protein_coding	Ano6	utr3	ENSMUSG00000064210	NonProperStrand	11	1	-17.3541
chr2	155828985	155829075	protein_coding-noncoding	6430550D23Rik	utr3	ENSMUSG00000074646	NonProperStrand	1	chr2	155828540	155828620	protein_coding	6430550D23Rik	intron	ENSMUSG00000074646	NonProperStrand	2	1	-inf
chr7	54110630	54110710	protein_coding	Ldha	utr3	ENSMUSG00000063229	ProperStrand	280	chr3	95980320	95980410	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-3.8768
chr2	129998643	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr15	98350175	98350275	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	9	-10.6106
chr2	25218769	25218869	protein_coding	Uap1l1	exon	ENSMUSG00000026956	ProperStrand	8	chr2	18508668	18508719	tRNA	tRNA1947-AsnGTT	.	1887972	ProperStrand	179	1	-15.2301
chr8	122471056	122471651	protein_coding	Usp10	exon	ENSMUSG00000031826	ProperStrand	98	chr11	69483152	69483242	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-3.0668
chr6	127418510	127418598	protein_coding	Parp11	intron	ENSMUSG00000037997	ProperStrand	5	chr16	23111468	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-5.8178
chr9	108517373	108517424	protein_coding	Arih2	exon	ENSMUSG00000064145	ProperStrand	9	chr16	23110917	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-5.3337
chr8	66402826	66402916	SINE	B4A	B4	chr8B4A66402736	ProperStrand	1	chr4	41326814	41326894	protein_coding	Ubap1	exon	ENSMUSG00000028437	ProperStrand	9	1	-inf
chr13	55379006	55414629	protein_coding	Nsd1	exon	ENSMUSG00000021488	ProperStrand	186	chr7	116663634	116663732	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-1.7081
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	46439259	46439275	protein_coding	Fam149a	exon	ENSMUSG00000070044	ProperStrand	57	1	-4.5608
chr17	6138911	6138928	protein_coding	Tulp4	exon	ENSMUSG00000034377	ProperStrand	164	chr16	23110454	23110523	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-0.9585
chr4	10498370	10498389	lincRNA	1700123O12Rik	intron	ENSMUSG00000086080	NonProperStrand	5	chr12	106269469	106269559	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-9.2003
chrX	71517588	71517623	protein_coding	Rpl10	exon	ENSMUSG00000008682	ProperStrand	71	chr9	15119646	15119736	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.3421
chr14	56159295	56159313	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	chr3	84995363	84995380	protein_coding	Arfip1	intron	ENSMUSG00000074513	NonProperStrand	56	1	-11.0779
chr11	94352675	94352692	protein_coding	Epn3	exon	ENSMUSG00000010080	ProperStrand	6	chr7	116664794	116664884	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-11.6238
chr8	72287172	72287189	protein_coding	Zfp866	utr3	ENSMUSG00000043090	NonProperStrand	134	chr3	108357255	108357358	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	3	-7.7387
chr3	58219532	58220049	protein_coding	Tsc22d2	utr5	ENSMUSG00000027806	ProperStrand	7	chr16	23110965	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-6.1472
chr4	132394293	132394441	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	chr5	130300476	130300556	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	8	-4.1587
chr1	153602594	153665849	protein_coding	Edem3	utr3	ENSMUSG00000043019	ProperStrand	84	chr7	116664794	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	6	-12.3577
chr5	35241526	35241546	protein_coding	Htt	exon	ENSMUSG00000029104	ProperStrand	73	chr10	120709244	120712786	protein_coding	Tbc1d30	exon	ENSMUSG00000052302	ProperStrand	233	1	-10.1988
chr9	78219990	78220038	LTR	RLTR41	ERV1	chr9RLTR4178219889	NonProperStrand	1	chr2	26493395	26493485	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-inf
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr16	17262494	17262547	protein_coding	Hic2	utr3	ENSMUSG00000050240	ProperStrand	36	2	-12.8634
chr10	110930035	110930450	protein_coding	Nap1l1	exon	ENSMUSG00000058799	ProperStrand	185	chr7	117190037	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-1.4597
chr14	52694615	52694684	protein_coding	Hnrnpc	utr3	ENSMUSG00000060373	ProperStrand	75	chr12	55797769	55797859	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	1	-7.2528
chr6	119309462	119309497	protein_coding	Adipor2	exon	ENSMUSG00000030168	ProperStrand	79	chr17	24802948	24857815	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.8501
chr19	5493907	5493948	protein_coding	Cfl1	utr3	ENSMUSG00000056201	ProperStrand	88	chr2	26494708	26494808	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	11	-19.0546
chr11	6428035	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr10	39978342	39978485	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	40	-15.0525
chr9	43602627	43602646	protein_coding	Pvrl1	intron	ENSMUSG00000032012	ProperStrand	45	chr11	69483136	69483231	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-5.1232
chrX	71473772	71473820	protein_coding	Flna	exon	ENSMUSG00000031328	ProperStrand	134	chr19	8963075	8963165	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	13	-inf
chrX	83547356	83547372	protein_coding	Mageb4	intron	ENSMUSG00000035427	NonProperStrand	191	chr9	120038552	120038634	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.1882
chr10	89267633	89267649	protein_coding	Uhrf1bp1l	exon	ENSMUSG00000019951	NonProperStrand	55	chr11	106362638	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-7.5781
chr5	117565843	117565933	protein_coding	Suds3	utr5	ENSMUSG00000066900	ProperStrand	22	chr4	131866154	131866236	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	5	-20.0515
chr7	51989709	51989809	protein_coding	Zfp473	utr3	ENSMUSG00000048012	ProperStrand	3	chr5	130300481	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-8.5956
chr14	124243064	124243083	protein_coding	Itgbl1	exon	ENSMUSG00000032925	ProperStrand	159	chr9	15119676	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.1219
chr2	84883131	84884524	protein_coding	Ssrp1	exon	ENSMUSG00000027067	ProperStrand	118	chr8	112363250	112363274	snoRNA	ENSMUSG00000077549_Snord71	.	ENSMUSG00000077549	ProperStrand	196	10	-inf
chr6	83318070	83318086	protein_coding	Tet3	exon	ENSMUSG00000034832	NonProperStrand	93	chr9	120037898	120037967	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-3.8746
chr4	151777165	151778720	protein_coding	Kcnab2	exon	ENSMUSG00000028931	ProperStrand	22	chr8	98269959	98270082	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-7.5392
chr7	26180609	26180627	protein_coding	Lipe	exon	ENSMUSG00000003123	ProperStrand	24	chr11	6428077	6428155	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.9246
chr2	154703429	154703519	protein_coding	Eif2s2	exon	ENSMUSG00000074656	ProperStrand	96	chr11	69481335	69481404	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-4.2112
chr5	31093938	31093956	protein_coding	Dpysl5	exon	ENSMUSG00000029168	NonProperStrand	38	chr10	80253590	80253670	protein_coding	Dot1l	exon	ENSMUSG00000061589	ProperStrand	48	1	-14.6826
chr10	41531088	41531104	protein_coding	Sesn1	exon	ENSMUSG00000038332	NonProperStrand	6	chr2	158185584	158185655	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	3	-19.9204
chr2	131003453	131003553	protein_coding	Cenpb	utr3	ENSMUSG00000068267	ProperStrand	26	chr8	32260335	32260398	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-6.2695
chr11	116535465	116535534	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr13	90238600	90238700	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	2	-3.1014
chr16	21222790	21222862	protein_coding	Ephb3	utr3	ENSMUSG00000005958	ProperStrand	23	chr16	23110966	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.4133
chr17	35282637	35282832	protein_coding	Bag6	exon	ENSMUSG00000024392	ProperStrand	181	chr9	15119988	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-5.0848
chr7	134236166	134236216	protein_coding	AI467606	exon	ENSMUSG00000045165	ProperStrand	1	chr1	89673566	89673625	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-inf
chr10	126990862	126990906	protein_coding	Lrp1	exon	ENSMUSG00000040249	ProperStrand	151	chr2	32818902	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-3.7098
chr5	74489201	74489586	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr7	51505506	51505591	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	10	-20.6569
chr10	80642376	80642444	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr19	46022236	46022252	protein_coding	9130011E15Rik	intron	ENSMUSG00000039901	ProperStrand	129	1	-4.6115
chr15	95856045	95856062	LINE	L1_Rod	L1	chr15L1_Rod95855901	NonProperStrand	12	chr11	115872481	115873829	protein_coding	Galk1	exon	ENSMUSG00000020766	ProperStrand	24	1	-18.2317
chr7	107084282	107084331	processed_transcript	Rnf169	.	ENSMUSG00000058761	ProperStrand	4	chr3	68889026	68889057	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-8.7538
chr17	33795351	33795832	protein_coding	Hnrnpm	exon	ENSMUSG00000059208	ProperStrand	56	chr3	123210861	123210951	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-3.9092
chr7	52289510	52304900	protein_coding	Prr12	exon	ENSMUSG00000046574	ProperStrand	86	chr11	69483136	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	4	-7.2289
chr1	177612990	177613026	protein_coding	Opn3	intron	ENSMUSG00000026525	ProperStrand	31	chr14	31827478	31827514	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	2	-13.1967
chr15	34370545	34370636	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	chr11	69482449	69482498	snoRNA	ENSMUSG00000089542_snoU6-77	.	ENSMUSG00000089542	ProperStrand	138	1	-2.0937
chr2	3940581	3940598	protein_coding-noncoding	Frmd4a	utr5	ENSMUSG00000026657	ProperStrand	2	chr14	45958454	45958510	protein_coding	Psmc6	intron	ENSMUSG00000021832	ProperStrand	326	1	-17.6224
chrX	11635848	11635864	protein_coding	Bcor	exon	ENSMUSG00000040363	NonProperStrand	293	chr10	77865431	77866296	protein_coding	Rrp1	exon	ENSMUSG00000061032	ProperStrand	177	1	-7.9719
chr4	137813145	137813162	protein_coding	Sh2d5	exon	ENSMUSG00000045349	NonProperStrand	31	chr16	23111374	23111464	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.2771
chr2	25439245	25439289	protein_coding	B230208H17Rik	utr3	ENSMUSG00000015087	ProperStrand	25	chr18	35714144	35714253	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-5.1110
chr9	114472140	114472189	protein_coding	Trim71	exon	ENSMUSG00000079259	ProperStrand	162	chr9	15119996	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-5.2992
chr1	168095388	168095488	protein_coding	Gpa33	utr3	ENSMUSG00000000544	ProperStrand	33	chr7	17501742	17501770	protein_coding	Calm3	utr3	ENSMUSG00000019370	ProperStrand	28	1	-16.0365
chr2	146125208	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	chr15	34370545	34370576	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-3.0370
chr7	25785706	25785945	protein_coding	Atp1a3	exon	ENSMUSG00000040907	ProperStrand	66	chr2	130102054	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-5.1711
chr13	5868510	5868550	protein_coding	Klf6	utr3	ENSMUSG00000000078	ProperStrand	10	chr10	23505156	23505201	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.3364
chr3	144748059	144749264	protein_coding	Clca5	exon	ENSMUSG00000036960	ProperStrand	86	chr17	35089182	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-4.7871
chr8	86243456	86243488	protein_coding	Ddx39	exon	ENSMUSG00000005481	ProperStrand	24	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-9.5737
chr13	55650638	55650655	protein_coding	Fam193b	exon	ENSMUSG00000021495	ProperStrand	51	chr15	79908931	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-5.7912
chr9	78023108	78023183	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr11	98877463	98877752	protein_coding	Top2a	exon	ENSMUSG00000020914	ProperStrand	324	1	-2.7135
chr4	53873613	53873646	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	chr1	72290908	72290972	snRNA	ENSMUSG00000093111_AC120136.1	.	ENSMUSG00000093111	ProperStrand	137	1	-7.3976
chr14	20451772	20451789	LTR	IAPLTR3-int	ERVK	chr14IAPLTR3-int20447903	ProperStrand	44	chr11	60592021	60592050	protein_coding	Smcr8	exon	ENSMUSG00000049323	ProperStrand	46	1	-14.4837
chr14	60998023	60998039	protein_coding	Fam123a	exon	ENSMUSG00000021986	ProperStrand	13	chr12	88778746	88778767	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-9.5904
chr9	100966289	100966307	SINE	B4A	B4	chr9B4A100966214	ProperStrand	51	chr8	13174487	13174543	protein_coding	Lamp1	exon	ENSMUSG00000031447	ProperStrand	92	1	-12.7844
chr8	95357051	95357083	protein_coding	Mmp2	exon	ENSMUSG00000031740	ProperStrand	42	chr17	24857794	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.9140
chr15	75706248	75706301	LTR	ORR1B1	MaLR	chr15ORR1B175706090	ProperStrand	1	chr11	62416579	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-inf
chr10	21069149	21069179	protein_coding	Hbs1l	exon	ENSMUSG00000019977	ProperStrand	27	chr3	85944541	85944586	snoRNA	ENSMUSG00000064390_Rnu73b	.	ENSMUSG00000064390	ProperStrand	164	1	-12.9132
chr7	91048847	91048863	protein_coding	Mesdc2	utr3	ENSMUSG00000038503	ProperStrand	19	chrX	34622906	34622990	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	4	-16.8151
chr7	51503494	51503547	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	chr19	9042728	9042821	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	1	-4.8316
chr11	100570044	100570174	protein_coding	Kat2a	exon	ENSMUSG00000020918	ProperStrand	68	chr17	13112490	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-4.3408
chr13	77181758	77181808	LINE	Lx2	L1	chr13Lx277181665	NonProperStrand	1	chr2	158204055	158204093	snoRNA	ENSMUSG00000065840_SNORA71	.	ENSMUSG00000065840	ProperStrand	107	1	-inf
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr7	54110740	54110809	protein_coding	Ldha	utr3	ENSMUSG00000063229	ProperStrand	280	3	-8.5009
chr18	35714266	35714293	lincRNA	Snhg4	intron	ENSMUSG00000090430	ProperStrand	270	chr2	32530700	32530769	snoRNA	ENSMUSG00000093277_AL772271.2	.	ENSMUSG00000093277	ProperStrand	23	1	-12.2394
chr11	88582094	88582118	lincRNA	C030037D09Rik	exon	ENSMUSG00000087574	ProperStrand	8	chr6	124665351	124665441	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	5	-19.5050
mmu-miR-291a-5p	0	22	miRNA	mmu-miR-291a-5p	.	mmu-miR-291a-5p	ProperStrand	8	chr19	8800117	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-11.7352
chr4	55362973	55363063	protein_coding	Rad23b	utr5	ENSMUSG00000028426	ProperStrand	86	chr10	110918550	110918630	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-2.8017
chr17	49188279	49188296	protein_coding	Lrfn2	intron	ENSMUSG00000040490	ProperStrand	4	chr4	131865855	131865927	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.0048
chr12	72089166	72089190	protein_coding	Psma3	intron	ENSMUSG00000060073	ProperStrand	20	chr10	23505152	23505236	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-5.2605
chr7	109054553	109058193	protein_coding	2400001E08Rik	exon	ENSMUSG00000030842	ProperStrand	18	chr4	131908356	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.4481
chrX	107396011	107396027	LTR	RMER17A	ERVK	chrXRMER17A107395334	NonProperStrand	27	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-9.3465
chr1	190267301	190267317	protein_coding	Ush2a	exon	ENSMUSG00000026609	NonProperStrand	60	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-10.7632
chr17	85637230	85637246	protein_coding	1700106N22Rik	intron	ENSMUSG00000071037	ProperStrand	17	chr2	130103781	130103823	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-11.0276
chr12	110881085	110881115	lincRNA	Rian	intron	ENSMUSG00000091793	ProperStrand	612	chr5	115600131	115600297	protein_coding	Mlec	exon	ENSMUSG00000048578	ProperStrand	47	1	-9.1568
chr7	29776365	29776386	protein_coding	Map4k1	intron	ENSMUSG00000037337	ProperStrand	31	chr8	73419658	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.3622
chr1	60466567	60466586	protein_coding	Abi2	utr5	ENSMUSG00000026782	ProperStrand	15	chr6	134097815	134097831	protein_coding	Etv6	intron	ENSMUSG00000030199	NonProperStrand	77	1	-15.6388
chr12	60774059	60774112	snoRNA	ENSMUSG00000077603_SNORA3	.	ENSMUSG00000077603	ProperStrand	185	chr3	123210872	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	4	-3.1412
chr2	26493468	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-2.1785
chr12	112504822	112504912	protein_coding	Traf3	utr3	ENSMUSG00000021277	ProperStrand	39	chr5	130300460	130300540	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-8.2806
chr17	71990951	71990998	snoRNA	ENSMUSG00000092713_CT010429.1	.	ENSMUSG00000092713	ProperStrand	182	chr18	33954815	33954909	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-1.6236
chr15	76780068	76780111	protein_coding	1110038F14Rik	exon	ENSMUSG00000063236	ProperStrand	3	chr4	131866629	131866676	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	3	-inf
chr11	50125283	50139081	protein_coding	Canx	utr5	ENSMUSG00000020368	ProperStrand	296	chr7	150717297	150717377	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-2.5411
chr2	119742949	119743049	protein_coding	Mga	exon	ENSMUSG00000033943	ProperStrand	180	chr18	35102297	35102345	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-4.4526
chr10	122702149	122702167	protein_coding	Fam19a2	utr5	ENSMUSG00000044071	NonProperStrand	52	chr4	131865867	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.9942
chr2	41877327	41877407	protein_coding	Lrp1b	intron	ENSMUSG00000049252	ProperStrand	376	chr5	35042067	35042157	protein_coding	Grk4	utr3	ENSMUSG00000052783	ProperStrand	15	1	-12.4562
chr3	89354340	89354357	protein_coding	Kcnn3	intron	ENSMUSG00000000794	NonProperStrand	38	chr8	113366329	113366354	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	1	-10.0993
chr10	89282309	89282325	protein_coding	Uhrf1bp1l	utr3	ENSMUSG00000019951	NonProperStrand	55	chr7	116663634	116663767	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.6620
chr12	71347267	71347283	protein_coding	Trim9	utr3	ENSMUSG00000021071	NonProperStrand	75	chr7	147130221	147130308	protein_coding	Utf1	exon	ENSMUSG00000047751	ProperStrand	67	1	-12.6421
chr16	23111779	23111839	protein_coding	Eif4a2	intron	ENSMUSG00000022884	ProperStrand	356	chr2	158185530	158185630	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-3.0942
chr2	37502726	37502742	protein_coding	Strbp	utr5	ENSMUSG00000026915	ProperStrand	90	chr12	83498333	83498373	protein_coding	Sipa1l1	exon	ENSMUSG00000042700	ProperStrand	84	1	-11.8229
chr17	31640574	31640590	protein_coding	Wdr4	exon	ENSMUSG00000024037	NonProperStrand	18	chr16	23110551	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.6884
chr3	23298984	23299074	LINE	L1_Mus1	L1	chr3L1_Mus123298493	ProperStrand	1	chr3	23299113	23299203	LINE	L1_Mus1	L1	chr3L1_Mus123299088	NonProperStrand	1	1	-inf
chr17	13115655	13115715	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	chr4	116828379	116828451	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	5	-12.5563
chr5	110666757	110666791	protein_coding	Ankle2	exon	ENSMUSG00000029501	ProperStrand	23	chr17	24857781	24857845	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.0279
chr14	112766936	112766997	LTR	MMETn-int	ERVK	chr14MMETn-int112765665	ProperStrand	2	chr7	52381973	52382011	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	2	-inf
chr2	30141615	30141632	protein_coding	Dolk	utr5	ENSMUSG00000075419	ProperStrand	5	chr4	131908257	131908297	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-6.0411
chr11	99091514	99091532	protein_coding-noncoding	Smarce1	utr3	ENSMUSG00000037935	NonProperStrand	17	chr12	80156030	80156078	protein_coding	Plekhh1	exon	ENSMUSG00000060716	ProperStrand	24	1	-17.6266
chr7	25864874	25864890	protein_coding	Zfp574	exon	ENSMUSG00000045252	ProperStrand	14	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.3681
chr16	37777391	37777408	protein_coding	Fstl1	exon	ENSMUSG00000022816	ProperStrand	179	chr7	118219574	118219620	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-2.2145
chr11	6520321	6520337	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	chr17	35087893	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	2	-1.3069
chr4	131399490	131399506	protein_coding	Mecr	exon	ENSMUSG00000028910	NonProperStrand	109	chr7	117189864	117189945	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	2	-8.3015
chr6	25725651	25725673	protein_coding	Pot1a	exon	ENSMUSG00000029676	ProperStrand	3	chr11	69481335	69481380	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-9.3812
chr13	58229333	58229449	protein_coding	Hnrnpa0	exon	ENSMUSG00000007836	ProperStrand	110	chr11	69825557	69825574	protein_coding	Acadvl	intron	ENSMUSG00000018574	ProperStrand	19	1	-14.4334
chr7	52382753	52382814	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	chr2	130103432	130103502	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-1.8944
chr16	57163088	57163132	protein_coding	Nit2	intron	ENSMUSG00000022751	ProperStrand	6	chr18	33954887	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-13.2308
chr19	10280968	10281677	protein_coding	1810006K21Rik	exon	ENSMUSG00000036372	ProperStrand	9	chr2	26494763	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-6.8145
chr5	38101583	38101599	protein_coding	Stk32b	intron	ENSMUSG00000029123	ProperStrand	7	chr18	35102329	35102369	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-10.9926
mmu-miR-6238	1	19	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr2	4974190	4974207	protein_coding	Optn	exon	ENSMUSG00000026672	ProperStrand	451	1	-6.5167
chr8	8265016	8265033	LINE	L2	L2	chr8L28264734	NonProperStrand	1	chr11	106362327	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-inf
chr11	75119679	75119710	protein_coding	Rpa1	exon	ENSMUSG00000000751	ProperStrand	37	chrX	71589885	71589905	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	1	-11.1239
chr11	102962937	102962953	protein_coding	Plcd3	utr5	ENSMUSG00000020937	NonProperStrand	3	chr2	179766208	179766523	protein_coding	Lsm14b	exon	ENSMUSG00000039108	ProperStrand	26	1	-20.0435
chr9	122977231	122977338	protein_coding-noncoding	Zdhhc3	utr3	ENSMUSG00000025786	ProperStrand	9	chr14	52852462	52852502	protein_coding	Chd8	exon	ENSMUSG00000053754	ProperStrand	167	1	-15.1394
chr5	100393025	100401424	protein_coding	Hnrnpd	intron	ENSMUSG00000000568	ProperStrand	33	chr3	123210854	123210948	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-5.3607
chr16	20388546	20388646	protein_coding	Abcc5	intron	ENSMUSG00000022822	ProperStrand	30	chr10	127527221	127527295	protein_coding	Atp5b	utr3	ENSMUSG00000025393	ProperStrand	612	1	-10.0636
chr1	120732904	120920171	protein_coding	Gli2	intron	ENSMUSG00000048402	ProperStrand	148	chr4	131865855	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-2.1781
chr1	172993122	172993139	protein_coding	Fcgr3	intron	ENSMUSG00000059498	ProperStrand	44	chr10	23506278	23506348	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-7.5660
chr17	87972359	87972375	SINE	RSINE1	B4	chr17RSINE187972335	ProperStrand	6	chr11	62418014	62418044	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-10.2731
chr8	109224143	109240568	protein_coding	Tmco7	exon	ENSMUSG00000041949	ProperStrand	30	chr4	131908689	131908765	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.2894
chr9	114421518	114421537	protein_coding	Trim71	utr3	ENSMUSG00000079259	ProperStrand	162	chr2	130103482	130103503	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-6.0950
chr4	140723745	140723761	protein_coding	Fbxo42	exon	ENSMUSG00000028920	ProperStrand	91	chr11	62418038	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-4.7495
chr10	85409938	85410025	protein_coding	D10Wsu52e	exon	ENSMUSG00000001783	ProperStrand	45	chr4	131865859	131865949	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.2312
chr4	141587614	141587630	protein_coding	Tmem51	exon	ENSMUSG00000040616	ProperStrand	30	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-9.1207
chr7	38468013	38468033	protein_coding	Zfp536	intron	ENSMUSG00000043456	ProperStrand	57	chr16	23111389	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.3302
chr3	54607604	54607621	protein_coding	Rfxap	utr3	ENSMUSG00000036615	NonProperStrand	6	chr5	130300460	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	5	-19.9160
chr1	55135121	55135201	protein_coding	Hspd1	utr3	ENSMUSG00000025980	ProperStrand	140	chr8	37632736	37632793	protein_coding	Dlc1	utr3	ENSMUSG00000031523	ProperStrand	89	2	-17.0039
chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-1.2427
chr3	103546182	103546206	protein_coding	Hipk1	utr3	ENSMUSG00000008730	ProperStrand	23	chr10	23505149	23505197	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.7622
chr3	94690690	94690780	protein_coding	Psmb4	exon	ENSMUSG00000005779	ProperStrand	26	chr12	106269477	106269557	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-5.7637
chr8	125589305	125589322	protein_coding	Spg7	utr5	ENSMUSG00000000738	ProperStrand	40	chr4	131908821	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.8200
chr7	31429919	31430009	protein_coding	Rbm42	exon	ENSMUSG00000036733	ProperStrand	9	chr17	24857740	24857820	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-5.8950
chr1	130128041	130131675	protein_coding	R3hdm1	exon	ENSMUSG00000056211	ProperStrand	43	chr7	52382753	52382827	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-7.4156
chr1	96116979	96117069	DNA	Cheshire	MER1_type	chr1Cheshire96116974	NonProperStrand	1	chr16	61222829	61222909	LTR	IAP-d-int	ERVK	chr16IAP-d-int61222849	NonProperStrand	1	1	-inf
chr3	88387785	88390864	protein_coding	Ssr2	exon	ENSMUSG00000041355	ProperStrand	22	chr16	23111772	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.6613
chr1	93011276	93011341	protein_coding	Lrrfip1	exon	ENSMUSG00000026305	ProperStrand	26	chr4	131865856	131865927	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.1929
chr4	131908431	131908511	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr17	35278559	35278855	protein_coding	Bag6	exon	ENSMUSG00000024392	ProperStrand	181	3	-11.9383
chr10	107800778	107800854	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	chr8	73419661	73419761	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	4	-0.7343
chr7	107255123	107255146	protein_coding	Pold3	exon	ENSMUSG00000030726	ProperStrand	14	chr7	116664816	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-8.7689
chr1	91358413	91358430	protein_coding	Agap1	intron	ENSMUSG00000055013	ProperStrand	229	chr17	39985424	39985512	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-3.3801
chr3	130969678	130969768	protein_coding	Hadh	intron	ENSMUSG00000027984	ProperStrand	35	chr1	120355715	120355798	snRNA	ENSMUSG00000080542_U4atac	.	ENSMUSG00000080542	ProperStrand	73	1	-14.0094
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr7	16524110	16524137	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	1	-4.4597
chr1	129430484	129430574	protein_coding	Tmem163	intron	ENSMUSG00000026347	ProperStrand	7	chr1	129249514	129249604	protein_coding	Mgat5	intron	ENSMUSG00000036155	NonProperStrand	5	1	-19.9473
chr17	46873049	46873142	protein_coding	Cnpy3	utr3	ENSMUSG00000023973	ProperStrand	85	chr2	125499562	125499579	protein_coding	Eid1	utr3	ENSMUSG00000091337	ProperStrand	60	1	-12.6139
chr1	174127726	174127806	protein_coding	Pea15a	utr3	ENSMUSG00000013698	ProperStrand	15	chr8	124420342	124420432	protein_coding	Slc7a5	exon	ENSMUSG00000040010	ProperStrand	166	1	-14.0911
chr8	74493083	74493126	protein_coding	Zfp961	utr3	ENSMUSG00000052446	ProperStrand	35	chr17	35088957	35089006	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-6.9364
chr3	96073885	96073922	protein_coding	Hist2h2bb	intron	ENSMUSG00000050936	ProperStrand	57	chrX	101154574	101154608	protein_coding	Rlim	utr3	ENSMUSG00000056537	ProperStrand	38	1	-14.3366
chr5	81522762	81522780	protein_coding	Lphn3	intron	ENSMUSG00000037605	NonProperStrand	39	chr4	131865380	131865463	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-4.8255
chr2	164630909	164630925	protein_coding	Zswim3	exon	ENSMUSG00000045822	ProperStrand	9	chr4	132394364	132394449	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	1	-13.0247
chr9	21823257	21823273	protein_coding	Elavl3	exon	ENSMUSG00000003410	NonProperStrand	137	chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	2	-14.2109
chr18	35989478	35989508	protein_coding	Cxxc5	utr5	ENSMUSG00000046668	NonProperStrand	1	chr18	35102299	35102336	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-inf
chr6	124662469	124662521	protein_coding	Phb2	exon	ENSMUSG00000004264	ProperStrand	43	chr4	131908753	131908792	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.7076
chr4	133407094	133407160	protein_coding	Rps6ka1	exon	ENSMUSG00000003644	ProperStrand	68	chr5	123622050	123622066	protein_coding	Hpd	exon	ENSMUSG00000029445	ProperStrand	254	1	-10.1687
chr1	182261853	182261869	protein_coding	Itpkb	intron	ENSMUSG00000038855	NonProperStrand	27	chr17	24857717	24857746	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.7240
chr1	36577447	36577484	protein_coding	Cnnm3	exon	ENSMUSG00000001138	ProperStrand	58	chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	2	-15.6475
chr19	11015616	11015632	protein_coding	Gpr44	exon	ENSMUSG00000034117	NonProperStrand	118	chr11	102294590	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	1	-7.5434
chr9	63868722	63868739	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	chr10	62312101	62341336	protein_coding	Tet1	exon	ENSMUSG00000047146	ProperStrand	286	8	-20.3916
chr11	116535915	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chrX	71188724	71188824	protein_coding	Hcfc1	utr3	ENSMUSG00000031386	ProperStrand	424	1	-2.2852
chr8	109694310	109703323	protein_coding	Cyb5b	exon	ENSMUSG00000031924	ProperStrand	39	chr10	78538597	78538615	protein_coding	2610008E11Rik	intron	ENSMUSG00000060301	NonProperStrand	1	1	-inf
chr6	112636571	112636642	protein_coding	Rad18	intron	ENSMUSG00000030254	ProperStrand	38	chr17	24857794	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	4	-10.7118
chr5	75011826	75011849	protein_coding	Lnx1	intron	ENSMUSG00000029228	NonProperStrand	4	chr8	98269984	98270032	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-11.1714
chr7	51505821	51505851	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	chr7	51505228	51505308	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	3	-8.8529
chr15	38852430	38852453	protein_coding	Fzd6	intron	ENSMUSG00000022297	ProperStrand	15	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-9.7267
chr11	49487674	49487764	protein_coding	Cnot6	utr3	ENSMUSG00000020362	ProperStrand	18	chr4	131908275	131908355	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.4481
chr3	30936943	30937951	protein_coding	Prkci	exon	ENSMUSG00000037643	ProperStrand	39	chr16	23111773	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.6215
chr2	26777279	26777352	protein_coding	Surf4	utr3	ENSMUSG00000014867	ProperStrand	16	chr2	157119950	157120991	protein_coding	Rpn2	exon	ENSMUSG00000027642	ProperStrand	363	1	-12.3922
chr14	58199872	58199895	protein_coding	Xpo4	utr3	ENSMUSG00000021952	ProperStrand	39	chr12	55797803	55797932	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	1	-8.5610
chr8	96704032	96704084	protein_coding	Mt1	exon	ENSMUSG00000031765	ProperStrand	92	chr5	108336411	108336490	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-4.0656
chr13	55418953	55418970	protein_coding	Nsd1	utr3	ENSMUSG00000021488	NonProperStrand	4	chr17	45704883	45704926	protein_coding	Hsp90ab1	utr3	ENSMUSG00000023944	ProperStrand	1627	1	-12.3865
chr12	107313254	107313294	protein_coding	Vrk1	utr3	ENSMUSG00000021115	ProperStrand	10	chr5	130295429	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-8.8613
chr8	122129035	122129052	protein_coding	Taf1c	utr5	ENSMUSG00000031832	ProperStrand	26	chr19	8799831	8799899	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-6.5948
chr7	87236972	87237103	protein_coding	Zfp710	utr3	ENSMUSG00000048897	ProperStrand	229	chr5	149859918	149859947	protein_coding	Hmgb1	utr3	ENSMUSG00000066551	ProperStrand	99	1	-9.6224
chr5	112765176	112766012	protein_coding	Tfip11	exon	ENSMUSG00000029345	ProperStrand	111	chr4	131908688	131908784	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-1.1298
chr19	9951195	9951259	protein_coding	Incenp	exon	ENSMUSG00000024660	ProperStrand	111	chr17	24857766	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-2.5529
chr1	137995413	137995430	protein_coding	Cacna1s	intron	ENSMUSG00000026407	NonProperStrand	37	chr4	129662257	129662276	protein_coding	Bai2	utr5	ENSMUSG00000028782	ProperStrand	119	1	-12.9145
chr11	114530112	114533060	protein_coding	Rpl38	exon	ENSMUSG00000057322	ProperStrand	29	chr4	131865856	131865936	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.9946
chr9	40612122	40612167	snoRNA	ENSMUSG00000075924_Snord14d	.	ENSMUSG00000075924	ProperStrand	131	chr17	24857738	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	6	-8.5561
chr3	115952743	115952761	protein_coding	Gpr88	utr3	ENSMUSG00000068696	ProperStrand	8	chr2	130101972	130102091	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	4	-18.8241
chr2	5763068	5765946	protein_coding	Cdc123	exon	ENSMUSG00000039128	ProperStrand	19	chr16	23110888	23110978	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7016
chr4	62052370	62052405	protein_coding	Slc31a1	utr3	ENSMUSG00000066150	ProperStrand	45	chr16	23111777	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-6.3660
chrX	107396011	107396027	LTR	RMER17A	ERVK	chrXRMER17A107395334	NonProperStrand	27	chr10	76518389	76518467	protein_coding	Col18a1	exon	ENSMUSG00000001435	ProperStrand	287	1	-11.7911
chr7	87026345	87026445	protein_coding	Ap3s2	intron	ENSMUSG00000063801	ProperStrand	20	chr1	162967751	162967806	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	1	-12.4757
chr2	164616495	164616514	protein_coding-noncoding	Snx21	utr5	ENSMUSG00000050373	ProperStrand	2	chr11	6428090	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-10.4671
chr3	88709339	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr5	108336363	108336494	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	22	-20.1283
chr4	106111701	106111717	protein_coding	Usp24	utr3	ENSMUSG00000028514	ProperStrand	74	chr17	35795158	35795209	protein_coding	Vars2	exon	ENSMUSG00000038838	ProperStrand	19	1	-15.2378
chr5	148113281	148113297	protein_coding	Cdx2	utr3	ENSMUSG00000029646	ProperStrand	276	chr18	73693170	73693186	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-2.6767
chr5	140241011	140241043	protein_coding	Ints1	exon	ENSMUSG00000029547	ProperStrand	45	chr13	108549784	108549801	protein_coding	Zswim6	intron	ENSMUSG00000032846	NonProperStrand	19	1	-16.2377
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr11	106362556	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	5	-8.4200
chr7	52378398	52378450	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	chr17	13112480	13112529	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	3	-2.4116
chr9	15117001	15117109	snoRNA	ENSMUSG00000077614_SNORA40	.	ENSMUSG00000077614	ProperStrand	54	chr7	29136525	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-6.7138
chr3	156224612	156224628	lincRNA	4930570G19Rik	exon	ENSMUSG00000085084	ProperStrand	326	chr7	118219597	118219643	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-1.2995
chr14	15572351	15572367	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr17	24856662	24856752	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-4.4607
chr6	91472434	91472534	protein_coding	Lsm3	utr3	ENSMUSG00000090846	ProperStrand	6	chr15	34370544	34370602	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-8.1636
chr11	80258797	80269765	protein_coding	Psmd11	exon	ENSMUSG00000017428	ProperStrand	34	chr10	23505149	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.0925
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr1	72272872	72273001	snRNA	ENSMUSG00000075752_U2	.	ENSMUSG00000075752	ProperStrand	535	2	-7.6545
chr2	26447192	26447208	protein_coding	Egfl7	exon	ENSMUSG00000026921	ProperStrand	44	chr9	58491441	58491509	protein_coding	Nptn	exon	ENSMUSG00000032336	ProperStrand	25	1	-15.7235
chr8	109410144	109410224	protein_coding	Chtf8	utr5	ENSMUSG00000046691	ProperStrand	33	chr11	98878344	98878434	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-7.4755
chr3	10440013	10440030	protein_coding	Snx16	utr5	ENSMUSG00000027534	ProperStrand	4	chr3	123210854	123210890	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-7.3786
chr7	125253522	125258625	protein_coding	Rps15a	exon	ENSMUSG00000008683	ProperStrand	28	chr7	118219575	118219609	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-5.6481
chr5	24072430	24073031	protein_coding	Abcf2	exon	ENSMUSG00000028953	ProperStrand	50	chr17	24857740	24857783	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.6076
chr12	101185331	101185431	protein_coding	Tdp1	intron	ENSMUSG00000021177	ProperStrand	23	chr2	63936036	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-9.7947
chrX	98794846	98794918	protein_coding	Taf1	utr3	ENSMUSG00000031314	ProperStrand	61	chr16	23110456	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.4335
chr11	62418013	62418039	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr11	62418032	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	9	-17.9238
chr8	63401795	63401842	protein_coding	Clcn3	exon	ENSMUSG00000004319	ProperStrand	93	chr1	162965554	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-6.5941
chr5	8988197	8989640	protein_coding	Crot	exon	ENSMUSG00000003623	ProperStrand	4	chr2	166890543	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	3	-21.7093
chr2	28938486	28938542	protein_coding	Ttf1	intron	ENSMUSG00000026803	ProperStrand	15	chr1	88247790	88247825	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	2	-12.6496
chr11	45723144	45723160	protein_coding	Clint1	utr3	ENSMUSG00000006169	NonProperStrand	273	chr4	118806998	118808362	protein_coding	Slc2a1	exon	ENSMUSG00000028645	ProperStrand	361	1	-6.7010
chr12	35015748	35015765	protein_coding	Hdac9	intron	ENSMUSG00000004698	ProperStrand	41	chr1	102076758	102076793	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	1	-10.2022
chr17	4082217	4082253	LINE	L1Md_A	L1	chr17L1Md_A4082095	NonProperStrand	28	chr18	35714193	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	NonProperStrand	47	2	-inf
chr1	40053934	40053951	protein_coding	Map4k4	exon	ENSMUSG00000026074	ProperStrand	348	chr7	52975760	52975783	protein_coding	Rpl18	exon	ENSMUSG00000059070	ProperStrand	116	1	-8.4715
chr2	181251086	181251176	protein_coding	Tpd52l2	utr3	ENSMUSG00000000827	NonProperStrand	4	chr18	33954818	33954908	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	NonProperStrand	24	3	-22.7099
chr15	100358959	100358975	protein_coding	Tfcp2	exon	ENSMUSG00000009733	NonProperStrand	77	chr10	80643027	80643135	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	2	-9.1641
chr7	133435736	133435826	protein_coding	Sbk1	exon	ENSMUSG00000042978	ProperStrand	24	chr11	97642981	97643061	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-6.9807
chr7	133592210	133592226	protein_coding	Atp2a1	exon	ENSMUSG00000030730	ProperStrand	49	chrX	12733269	12733308	protein_coding	Usp9x	exon	ENSMUSG00000031010	ProperStrand	174	1	-11.5855
chr14	105685211	105685233	protein_coding	Ndfip2	intron	ENSMUSG00000053253	ProperStrand	11	chr1	89681319	89681381	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-8.8598
chr9	119664282	119664299	protein_coding	Scn11a	exon	ENSMUSG00000034115	ProperStrand	55	chr11	77995189	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-6.3546
chr1	89834688	89834778	protein_coding	Dgkd	intron	ENSMUSG00000070738	ProperStrand	39	chr1	89681245	89681325	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-6.2892
chr6	125112098	125112293	protein_coding	Gapdh	exon	ENSMUSG00000057666	ProperStrand	356	chr15	79913322	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-0.7970
chr11	84042523	84045163	protein_coding	Acaca	exon	ENSMUSG00000020532	ProperStrand	100	chr17	35089233	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-4.4984
chr3	60433442	60433542	protein_coding	Mbnl1	utr3	ENSMUSG00000027763	ProperStrand	9	chr2	127259694	127259856	protein_coding	Gpat2	exon	ENSMUSG00000046338	ProperStrand	19	1	-19.1915
chr17	34729445	34729463	protein_coding	Pbx2	utr5	ENSMUSG00000034673	NonProperStrand	1	chr16	23111394	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-inf
chr9	59333970	59334070	protein_coding	Arih1	exon	ENSMUSG00000025234	ProperStrand	75	chr11	62416578	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-4.7351
chr19	5801152	5801174	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr12	81598586	81598635	protein_coding	Exd2	utr3	ENSMUSG00000032705	ProperStrand	7	1	-11.9600
chr7	28971394	28971410	protein_coding	Dyrk1b	exon	ENSMUSG00000002409	NonProperStrand	2	chr16	23110455	23110515	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-9.6327
chr17	32272396	32280608	protein_coding	Notch3	exon	ENSMUSG00000038146	ProperStrand	181	chr18	35716850	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-1.3686
chr16	57391760	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr8	86667567	86667882	protein_coding	Cc2d1a	exon	ENSMUSG00000036686	ProperStrand	18	5	-inf
chr12	111891500	111891582	protein_coding	Dync1h1	intron	ENSMUSG00000018707	ProperStrand	648	chr4	83939387	83939439	protein_coding	Bnc2	exon	ENSMUSG00000028487	ProperStrand	76	1	-8.0799
chr11	5004280	5004358	protein_coding	Rhbdd3	exon	ENSMUSG00000034175	ProperStrand	7	chr10	23505152	23505179	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-8.5700
chr16	13814467	13814537	protein_coding	Rrn3	utr3	ENSMUSG00000022682	ProperStrand	58	chr4	132867664	132867754	protein_coding	Wdtc1	intron	ENSMUSG00000037622	ProperStrand	81	1	-12.7810
chr2	158182156	158182173	lincRNA	9430008C03Rik	intron	ENSMUSG00000085385	ProperStrand	1039	chr9	115166631	115167625	protein_coding	Stt3b	exon	ENSMUSG00000032437	ProperStrand	66	1	-7.4256
chr5	74489266	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr3	31181065	31181086	protein_coding	Slc7a14	intron	ENSMUSG00000069072	NonProperStrand	7	1	-10.0043
chr7	5770542	5770622	LINE	L1VL4	L1	chr7L1VL45769635	NonProperStrand	1	chr7	5771092	5771182	LINE	L1_Mur1	L1	chr7L1_Mur15770788	NonProperStrand	1	1	-inf
chr19	10974699	10975187	protein_coding	Prpf19	exon	ENSMUSG00000024735	ProperStrand	75	chr8	32260344	32260424	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-4.2046
chr2	93784059	93784076	LTR	MTEa	MaLR	chr2MTEa93783777	NonProperStrand	50	chr16	32243954	32243974	protein_coding	Fbxo45	intron	ENSMUSG00000035764	ProperStrand	19	1	-16.0120
chr6	120837601	120837620	protein_coding	Bcl2l13	utr3	ENSMUSG00000009112	ProperStrand	18	chr5	111121066	111121186	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	4	-19.6416
chr11	95430487	95430552	protein_coding	Ngfr	utr3	ENSMUSG00000000120	ProperStrand	31	chr6	125136409	125136466	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	1	-7.7597
chr13	54781908	54781960	protein_coding	Rnf44	utr3	ENSMUSG00000034928	ProperStrand	90	chr11	70800375	70800391	protein_coding	Dhx33	utr3	ENSMUSG00000040620	NonProperStrand	14	1	-15.4668
chr9	117508643	117508733	protein_coding	Rbms3	intron	ENSMUSG00000039607	ProperStrand	12	chr7	54442470	54442550	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-13.0126
chr13	52741147	52741237	protein_coding	Syk	utr3	ENSMUSG00000021457	ProperStrand	20	chr11	69483148	69483228	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.4692
chr17	35971771	35971984	protein_coding	Tubb5	utr3	ENSMUSG00000001525	ProperStrand	624	chr19	8800355	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	8	-6.1335
chr17	90706035	90706052	protein_coding	Nrxn1	intron	ENSMUSG00000024109	NonProperStrand	22	chr5	151755614	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-9.7632
chrX	140786412	140787190	protein_coding-noncoding	Alg13	utr3	ENSMUSG00000041718	ProperStrand	87	chr12	88778632	88778722	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-5.7661
chr11	117011579	117011942	protein_coding	Sec14l1	exon	ENSMUSG00000020823	ProperStrand	71	chr12	110874223	110874290	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	1	-9.6396
chr10	69605346	69653841	protein_coding	Ccdc6	exon	ENSMUSG00000048701	ProperStrand	72	chr11	69483146	69483273	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	5	-10.4504
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr18	50171372	50171472	protein_coding	Tnfaip8	intron	ENSMUSG00000062210	ProperStrand	8	6	-19.4264
chr12	113414510	113414600	protein_coding	Kif26a	exon	ENSMUSG00000021294	ProperStrand	8	chr14	76247707	76247787	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-8.2107
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	126258757	126258773	protein_coding	Clspn	exon	ENSMUSG00000042489	NonProperStrand	2	1	-11.8388
chr2	3371531	3371582	protein_coding	Dclre1c	intron	ENSMUSG00000026648	ProperStrand	8	chr11	68758373	68758437	protein_coding	Arhgef15	intron	ENSMUSG00000052921	ProperStrand	1	1	-inf
chr6	125115316	125115621	protein_coding	Gapdh	utr5	ENSMUSG00000057666	ProperStrand	356	chr1	9932572	9932626	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-4.2526
chr1	108688302	108693023	protein_coding	Vps4b	exon	ENSMUSG00000009907	ProperStrand	29	chr9	15118322	15118381	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	9	-inf
chr12	60575476	60575494	LINE	L1_Mus4	L1	chr12L1_Mus460575423	ProperStrand	33	chr16	23111387	23111415	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.1725
chr3	107819517	107820302	protein_coding	Gstm1	exon	ENSMUSG00000058135	ProperStrand	27	chr8	32260335	32260374	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-6.1942
chr11	95141708	95141727	protein_coding	Myst2	exon	ENSMUSG00000038909	ProperStrand	56	chr11	77996576	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-6.2281
chr1	59539683	59539700	protein_coding	Fzd7	utr5	ENSMUSG00000041075	ProperStrand	373	chr10	23506292	23506343	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-3.4326
chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	chr5	121655016	121655065	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-0.9461
chr11	6428034	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr19	8798484	8798553	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	20	-1.0684
chr4	125738119	125738141	protein_coding	Oscp1	intron	ENSMUSG00000042616	NonProperStrand	4	chr3	104809039	104810934	protein_coding	Cttnbp2nl	exon	ENSMUSG00000062127	ProperStrand	15	1	-21.2797
chr19	7030248	7030308	protein_coding	Plcb3	exon	ENSMUSG00000024960	ProperStrand	111	chr19	43579408	43579425	protein_coding	Got1	intron	ENSMUSG00000025190	NonProperStrand	147	1	-10.2793
chr7	149763631	149763647	lincRNA	H19	exon	ENSMUSG00000000031	ProperStrand	20	chr2	158185577	158185653	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-8.6925
chr13	23647022	23647463	protein_coding	Hist1h1d	exon	ENSMUSG00000052565	ProperStrand	78	chr16	23111391	23111481	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-1.8468
chr7	52378433	52378480	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	chr8	32260335	32260424	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	3	-2.4844
chr7	52378548	52378606	protein_coding	Rps11	exon	ENSMUSG00000003429	ProperStrand	49	chr9	120038631	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	3	-8.5369
chr4	150462978	150463068	protein_coding	Camta1	exon	ENSMUSG00000014592	ProperStrand	170	chr5	74489578	74489658	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-1.9578
chr14	33005034	33005062	protein_coding-noncoding	Timm23	utr3	ENSMUSG00000013701	ProperStrand	7	chr14	33005059	33005139	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	4	-19.5703
chr5	77390178	77390223	protein_coding	Paics	exon	ENSMUSG00000029247	ProperStrand	78	chrX	58225380	58225396	pseudogene	Rpl7l1-ps1	.	ENSMUSG00000081323	ProperStrand	46	1	-13.3228
chr5	121809352	121809408	protein_coding	Gm15800	exon	ENSMUSG00000042744	ProperStrand	47	chr5	111121066	111121131	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	2	-11.1528
chr9	21823257	21823273	protein_coding	Elavl3	exon	ENSMUSG00000003410	NonProperStrand	137	chr11	106362304	106362335	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-4.2484
chr4	116826699	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	chr7	117166745	117166857	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	3	-0.7506
chr18	10052128	10052151	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr13	44994400	44994500	protein_coding	Jarid2	intron	ENSMUSG00000038518	ProperStrand	372	3	-12.1476
chr3	153575106	153575168	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	chr18	78157152	78157168	protein_coding	5430411K18Rik	intron	ENSMUSG00000039840	NonProperStrand	6	1	-13.2539
chr11	118417747	118417768	protein_coding	Rbfox3	intron	ENSMUSG00000025576	NonProperStrand	16	chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	1	-12.0825
chr15	98356682	98356772	protein_coding	2310037I24Rik	intron	ENSMUSG00000022992	ProperStrand	91	chr15	98356789	98356869	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	1	-6.9253
chr8	73038000	73042276	protein_coding	2810422J05Rik	exon	ENSMUSG00000055553	ProperStrand	171	chr19	8799072	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-3.8234
chr10	6280624	6280642	protein_coding	Mthfd1l	intron	ENSMUSG00000040675	ProperStrand	50	chr9	41822540	41822565	protein_coding	Sorl1	exon	ENSMUSG00000049313	ProperStrand	112	1	-12.4284
chr3	135275489	135275506	protein_coding	Nfkb1	exon	ENSMUSG00000028163	NonProperStrand	16	chr3	68889109	68889128	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-5.7992
chr10	75373025	75374306	protein_coding	Smarcb1	exon	ENSMUSG00000000902	ProperStrand	109	chr7	150717298	150717410	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-4.3556
chr17	71991785	71991822	protein_coding	Wdr43	intron	ENSMUSG00000041057	ProperStrand	70	chr18	35716834	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.9199
chr4	131908228	131908287	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-1.0914
chr4	114679807	114679838	protein_coding	Stil	exon	ENSMUSG00000028718	ProperStrand	16	chr3	88711300	88711403	protein_coding	Gon4l	exon	ENSMUSG00000054199	ProperStrand	1260	10	-19.5716
chr11	63780108	63780198	protein_coding	Cox10	intron	ENSMUSG00000042148	ProperStrand	21	chrX	34622945	34623025	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-5.1646
chr1	155316786	155316827	protein_coding	Dhx9	exon	ENSMUSG00000042699	ProperStrand	98	chr4	131908236	131908302	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.7866
chr11	85918286	85918308	protein_coding	Brip1	intron	ENSMUSG00000034329	NonProperStrand	3	chr16	23110455	23110517	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-8.5395
chr7	31376908	31376925	protein_coding	Zbtb32	utr5	ENSMUSG00000006310	NonProperStrand	20	chr6	85418255	85418355	protein_coding	Cct7	utr3	ENSMUSG00000030007	ProperStrand	173	1	-13.4166
chr8	108233712	108233729	protein_coding	4933405L10Rik	exon	ENSMUSG00000013158	ProperStrand	94	chr3	145171662	145171678	protein_coding	Col24a1	exon	ENSMUSG00000028197	ProperStrand	33	1	-13.6137
chr6	83318070	83318086	protein_coding	Tet3	exon	ENSMUSG00000034832	NonProperStrand	93	chr10	127522386	127522416	snoRNA	ENSMUSG00000093245_AC131120.1	.	ENSMUSG00000093245	ProperStrand	77	1	-11.9313
chr10	80316553	80317433	protein_coding	Lsm7	exon	ENSMUSG00000035215	ProperStrand	2	chr16	23111435	23111503	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-8.0851
chr4	83086115	83086136	protein_coding	Snapc3	intron	ENSMUSG00000028483	NonProperStrand	9	chr9	21602970	21602986	protein_coding	Kank2	utr5	ENSMUSG00000032194	ProperStrand	196	1	-14.8308
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr7	73804714	73804731	protein_coding	Asb7	exon	ENSMUSG00000030509	ProperStrand	10	3	-20.5037
chr13	14807945	14808035	LINE	Lx9	L1	chr13Lx914807326	NonProperStrand	1	chr13	14808347	14808427	LINE	Lx9	L1	chr13Lx914808274	NonProperStrand	1	1	-inf
chr14	61113419	61113436	LINE	L1MB3	L1	chr14L1MB361113375	NonProperStrand	72	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-8.5614
chr4	151386744	151388445	protein_coding	Klhl21	exon	ENSMUSG00000073700	ProperStrand	16	chr12	112779225	112779275	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-7.4007
chr5	129526442	129526629	protein_coding	Ran	exon	ENSMUSG00000029430	ProperStrand	82	chr19	8963079	8963169	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.7714
chr7	29136635	29136654	protein_coding	Rps16	intron	ENSMUSG00000037563	ProperStrand	191	chr8	32260343	32260424	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-2.5121
chr1	136499083	136499149	protein_coding	Kdm5b	utr5	ENSMUSG00000042207	ProperStrand	223	chr11	77996553	77996597	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-3.5779
chr13	113693653	113693695	protein_coding	Skiv2l2	exon	ENSMUSG00000016018	ProperStrand	55	chr4	131908267	131908357	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.5458
chr7	29600176	29600193	protein_coding	Hnrnpl	exon	ENSMUSG00000015165	ProperStrand	150	chr1	162967488	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-1.8950
chr7	29184679	29184742	protein_coding	Samd4b	utr3	ENSMUSG00000037513	ProperStrand	72	chr1	162966027	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-3.2691
chr5	21270693	21270709	protein_coding	Dnajc2	intron	ENSMUSG00000029014	NonProperStrand	5	chr4	131908236	131908291	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-6.0411
chr11	72730046	72730062	protein_coding	Zzef1	exon	ENSMUSG00000055670	NonProperStrand	16	chr19	8799581	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-9.4340
chr5	118477951	118477967	protein_coding	Tesc	exon	ENSMUSG00000029359	ProperStrand	114	chr17	13114971	13114996	protein_coding	Tcp1	exon	ENSMUSG00000068039	ProperStrand	116	1	-10.7002
chr12	88778631	88778767	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	chr14	76247712	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	14	-7.0272
chr12	70259712	70260004	protein_coding	Rps29	exon	ENSMUSG00000034892	ProperStrand	124	chr6	71084415	71084432	protein_coding	Thnsl2	intron	ENSMUSG00000054474	NonProperStrand	3	1	-18.4586
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	76689736	76689752	protein_coding	Ttn	exon	ENSMUSG00000051747	ProperStrand	66	2	-7.1528
chr9	50816824	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	chr18	35714146	35714236	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-2.1345
chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	chr1	162968446	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	2	-5.9573
chr3	105762564	105762884	protein_coding	Wdr77	exon	ENSMUSG00000000561	ProperStrand	15	chr19	5484218	5484863	protein_coding	Mus81	exon	ENSMUSG00000024906	NonProperStrand	2	1	-inf
chr12	57368398	57368417	DNA	MER5A	MER1_type	chr12MER5A57368332	NonProperStrand	5	chr7	36482356	36482373	protein_coding	Dpy19l3	intron	ENSMUSG00000043671	NonProperStrand	7	1	-20.9134
chr11	106684003	106684019	protein_coding	Smurf2	exon	ENSMUSG00000018363	ProperStrand	79	chr17	27559700	27559717	protein_coding	Grm4	utr3	ENSMUSG00000063239	ProperStrand	147	1	-10.9618
chr15	100299084	100299100	lincRNA	5330439K02Rik	exon	ENSMUSG00000092050	NonProperStrand	36	chr7	130143569	130143616	protein_coding	Rbbp6	exon	ENSMUSG00000030779	ProperStrand	46	1	-14.8894
chr10	90432660	90432684	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	chr19	8799855	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-2.4774
chr2	60630799	60630835	protein_coding	Rbms1	exon	ENSMUSG00000026970	ProperStrand	26	chr2	156670598	156670616	protein_coding	Tgif2	intron	ENSMUSG00000062175	NonProperStrand	1	1	-inf
chr9	111090184	111090201	protein_coding	Lrrfip2	intron	ENSMUSG00000032497	NonProperStrand	4	chr16	57391656	57391757	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	1	-15.9672
chr4	118108973	118109179	protein_coding	Cdc20	exon	ENSMUSG00000006398	ProperStrand	43	chr3	87543382	87543759	protein_coding	4933430H15Rik	exon	ENSMUSG00000023084	NonProperStrand	4	3	-21.6262
chr11	102294588	102294611	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr8	87525221	87525238	protein_coding	Hook2	exon	ENSMUSG00000052566	ProperStrand	204	1	-6.4608
chr8	125431029	125431119	protein_coding-noncoding	Ankrd11	utr3	ENSMUSG00000035569	ProperStrand	5	chr3	123210893	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-6.8746
chr16	32385739	32385794	protein_coding	Ubxn7	utr3	ENSMUSG00000053774	ProperStrand	30	chr1	145626154	145626192	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-10.2267
chr3	88715213	88715230	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr11	33061125	33061190	protein_coding	Npm1	exon	ENSMUSG00000057113	ProperStrand	352	1	-3.8060
chr17	12908741	12908759	protein_coding	Igf2r	exon	ENSMUSG00000023830	ProperStrand	151	chr1	89681248	89681354	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-3.6814
chr18	10052132	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	1	-5.6023
chr13	37458525	37458542	protein_coding	Ly86	intron	ENSMUSG00000021423	ProperStrand	7	chr17	35087892	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-9.5701
chr4	124615845	124615862	lincRNA	9930104L06Rik	exon	ENSMUSG00000044730	ProperStrand	15	chr19	5685204	5685296	protein_coding	Pcnxl3	exon	ENSMUSG00000054874	ProperStrand	96	1	-15.1955
chr8	125627255	125628968	protein_coding	Rpl13	exon	ENSMUSG00000000740	NonProperStrand	3	chr11	55283267	55299138	protein_coding	G3bp1	utr5	ENSMUSG00000018583	NonProperStrand	5	2	-inf
chr19	10275055	10275146	protein_coding	Fen1	exon	ENSMUSG00000024742	ProperStrand	44	chr1	33828651	33828669	protein_coding	Zfp451	intron	ENSMUSG00000042197	NonProperStrand	393	1	-10.1733
chr19	29670130	29670230	protein_coding	C030046E11Rik	exon	ENSMUSG00000038658	ProperStrand	104	chr2	166890502	166890557	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-6.4662
chr8	72582837	72582907	protein_coding	Sugp1	intron	ENSMUSG00000011306	ProperStrand	20	chr12	60774071	60774111	snoRNA	ENSMUSG00000077603_SNORA3	.	ENSMUSG00000077603	ProperStrand	185	3	-19.5313
chr17	46786911	46787001	protein_coding	Mrpl2	exon	ENSMUSG00000002767	ProperStrand	35	chr11	69481351	69481431	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-4.2039
chr13	6589742	6589842	protein_coding	Pfkp	intron	ENSMUSG00000021196	ProperStrand	197	chr8	87460792	87460810	protein_coding	Mast1	intron	ENSMUSG00000053693	ProperStrand	16	5	-21.0376
chrX	47916438	47976595	lincRNA	6720401G13Rik	intron	ENSMUSG00000085396	ProperStrand	34	chr11	69483136	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-5.9202
chrX	39029535	39029551	protein_coding	Gria3	utr3	ENSMUSG00000001986	ProperStrand	32	chr12	106269284	106269335	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-5.3536
chr9	106353725	106353742	protein_coding	Abhd14b	exon	ENSMUSG00000042073	ProperStrand	2	chr17	24857794	24857817	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-9.4368
chr5	111812088	111812105	protein_coding	Pitpnb	exon	ENSMUSG00000050017	ProperStrand	137	chr17	39985356	39985420	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-4.3351
chr4	21606097	21606114	protein_coding	Prdm13	exon	ENSMUSG00000040478	ProperStrand	51	chr1	185857228	185857244	protein_coding	1700056E22Rik	exon	ENSMUSG00000044854	ProperStrand	173	1	-11.5164
chr4	43505820	43505874	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr8	113681188	113681231	protein_coding	Glg1	utr3	ENSMUSG00000003316	ProperStrand	83	3	-6.5970
chr7	148141816	148141838	protein_coding	Ifitm2	utr5	ENSMUSG00000060591	ProperStrand	25	chr5	121655088	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-8.9375
chr11	3061170	3061260	protein_coding	Sfi1	intron	ENSMUSG00000023764	NonProperStrand	20	chr11	3081190	3081280	protein_coding	Sfi1	intron	ENSMUSG00000023764	ProperStrand	17	1	-18.1527
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr5	141792485	141792504	protein_coding	Sdk1	intron	ENSMUSG00000039683	NonProperStrand	21	1	-10.7160
chr1	102076758	102076790	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	chr11	97642970	97643080	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-0.8425
chr9	119148269	119148288	protein_coding	Oxsr1	utr3	ENSMUSG00000036737	ProperStrand	33	chr7	117189962	117190062	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.4547
chr4	137078551	137084803	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	chr4	143027927	143028559	protein_coding	Oog4	exon	ENSMUSG00000047799	NonProperStrand	99	1	-7.1070
chr5	35435855	35435935	protein_coding	Lrpap1	utr3	ENSMUSG00000029103	ProperStrand	43	chr1	162965981	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-4.2288
chr13	74476530	74476578	protein_coding	Sdha	exon	ENSMUSG00000021577	ProperStrand	70	chr15	76925519	76925586	protein_coding	Rbfox2	intron	ENSMUSG00000033565	ProperStrand	55	1	-13.1805
chr2	152137708	152137750	protein_coding	Tbc1d20	utr3	ENSMUSG00000027465	ProperStrand	27	chr10	23505152	23505214	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.4811
chr9	15121042	15121086	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	chr1	63225582	63225672	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-3.2252
chr7	3158591	3158651	protein_coding	AU018091	exon	ENSMUSG00000054753	ProperStrand	42	chr11	115935746	115937022	protein_coding	Unc13d	exon	ENSMUSG00000057948	ProperStrand	89	1	-13.2438
chr4	142721429	142721519	protein_coding	Prdm2	utr3	ENSMUSG00000057637	ProperStrand	46	chr18	35716777	35716857	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-4.6058
chr10	57504799	57504815	protein_coding	Fabp7	utr5	ENSMUSG00000019874	ProperStrand	16	chr6	49339580	49339598	protein_coding	D330028D13Rik	utr3	ENSMUSG00000047115	ProperStrand	21	1	-18.0482
chr18	35714057	35716840	lincRNA	Snhg4	intron	ENSMUSG00000090430	ProperStrand	270	chr18	35714142	35714296	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	26	-19.9027
chr19	35019827	35019906	protein_coding	Kif20b	intron	ENSMUSG00000024795	ProperStrand	45	chr3	123210853	123210889	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	4	-9.2181
chr17	56452595	56454640	protein_coding	Uhrf1	exon	ENSMUSG00000001228	ProperStrand	229	chr17	35089182	35089226	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-2.9684
chr7	91258331	91258347	protein_coding	Fam108c	utr3	ENSMUSG00000038459	NonProperStrand	65	chr18	35716811	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-3.6832
chr8	26933223	26933313	protein_coding	Ash2l	exon	ENSMUSG00000031575	ProperStrand	113	chr16	23111371	23111475	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	12	-16.0115
chr11	103744170	103771761	protein_coding	Nsf	exon	ENSMUSG00000034187	ProperStrand	20	chr16	23110902	23110982	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.6223
chr13	64277826	64277845	protein_coding	Habp4	intron	ENSMUSG00000021476	ProperStrand	2	chr2	158185547	158185652	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-13.9286
chr9	15121008	15121071	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	chr18	33954912	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	3	-2.4951
chr19	38869531	38869547	protein_coding	Noc3l	exon	ENSMUSG00000024999	NonProperStrand	149	chr2	166890560	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-5.7605
chr4	155496518	155497726	protein_coding	9430015G10Rik	exon	ENSMUSG00000059939	ProperStrand	17	chr11	69481351	69481431	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.6167
chr12	77157889	77157908	protein_coding	Syne2	exon	ENSMUSG00000063450	ProperStrand	63	chr19	8800085	8800152	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	5	-inf
chr2	179992726	179992939	protein_coding	Rps21	exon	ENSMUSG00000039001	ProperStrand	46	chr11	62416602	62416657	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-5.6857
chr2	118301814	118301853	protein_coding	Srp14	utr3	ENSMUSG00000009549	ProperStrand	38	chr4	131908236	131908319	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-5.8403
chr9	78023155	78023213	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chrX	158274965	158274981	protein_coding	Nhs	exon	ENSMUSG00000059493	NonProperStrand	50	1	-6.2373
chr17	27717551	27717594	protein_coding	Nudt3	utr3	ENSMUSG00000024213	ProperStrand	26	chr16	23110555	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.9778
chr6	88837881	88837958	protein_coding	Mcm2	exon	ENSMUSG00000002870	ProperStrand	83	chr19	12086454	12086495	tRNA	tRNA109-ValTAC	.	1564614	ProperStrand	96	1	-11.7165
chr17	25018508	25018524	protein_coding	Igfals	exon	ENSMUSG00000046070	ProperStrand	1	chr13	23654062	23654156	protein_coding	Hist1h3e	exon	ENSMUSG00000069273	ProperStrand	30	1	-inf
chr10	120414958	120414974	protein_coding	Lemd3	exon	ENSMUSG00000048661	ProperStrand	32	chr19	8963086	8963202	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	5	-14.7153
chr11	43373286	43373312	protein_coding	Ccnjl	intron	ENSMUSG00000044707	ProperStrand	13	chr1	9932550	9932617	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	3	-inf
chr11	94530109	94530758	protein_coding	Xylt2	exon	ENSMUSG00000020868	ProperStrand	65	chr8	73419735	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.9868
chr15	79623116	79623184	protein_coding	Npcd	exon	ENSMUSG00000089837	ProperStrand	11	chr11	77996559	77996600	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-9.5258
chr9	56733960	56733976	protein_coding	Cspg4	exon	ENSMUSG00000032911	NonProperStrand	3	chr1	89681130	89681176	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-11.7607
chr3	145722716	145722733	protein_coding	Wdr63	intron	ENSMUSG00000043020	NonProperStrand	5	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-6.5022
chr13	46862888	46862933	snoRNA	ENSMUSG00000064558_SNORA55	.	ENSMUSG00000064558	ProperStrand	187	chr18	35714160	35714260	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-1.5325
chr8	13880027	13880072	protein_coding	Zfp828	exon	ENSMUSG00000047710	ProperStrand	32	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.7856
chr16	5256015	5256031	protein_coding	Fam86	utr5	ENSMUSG00000022544	ProperStrand	231	chrX	156315497	156315519	protein_coding	Sh3kbp1	intron	ENSMUSG00000040990	ProperStrand	67	1	-10.3882
chrX	99383270	99383304	protein_coding	Rps4x	exon	ENSMUSG00000031320	ProperStrand	139	chr14	57312831	57312861	protein_coding	Mphosph8	intron	ENSMUSG00000079184	NonProperStrand	27	1	-13.2405
chr3	104580249	104580265	protein_coding	Fam19a3	utr5	ENSMUSG00000055865	NonProperStrand	11	chr12	17553062	17553088	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-8.4977
chr15	78982035	78982051	protein_coding	Polr2f	exon	ENSMUSG00000033020	NonProperStrand	71	chr11	62416600	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-4.8405
chr12	111932460	111932498	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr12	60141443	60141506	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-2.1152
chr2	165904622	165904638	protein_coding	Sulf2	exon	ENSMUSG00000006800	ProperStrand	171	chr14	76247711	76247760	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-2.2916
chr5	136712940	136712956	protein_coding	Sh2b2	intron	ENSMUSG00000005057	NonProperStrand	101	chr1	95257329	95261473	protein_coding	Ppp1r7	exon	ENSMUSG00000026275	ProperStrand	44	1	-12.8947
chrX	12649168	12649268	protein_coding	Usp9x	intron	ENSMUSG00000031010	ProperStrand	174	chr16	23110553	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-0.8873
chr3	99003133	99003151	protein_coding	Wars2	intron	ENSMUSG00000004233	NonProperStrand	48	chr9	40612859	40612921	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	2	-15.7491
chr11	80965641	80965658	protein_coding	Accn1	exon	ENSMUSG00000020704	NonProperStrand	228	chr7	112852032	112852049	protein_coding	Dnhd1	exon	ENSMUSG00000030882	NonProperStrand	6	1	-15.3849
chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	chr5	104868563	104869351	protein_coding	Spp1	exon	ENSMUSG00000029304	ProperStrand	52	1	-9.4966
chr19	9004243	9004343	protein_coding	Eml3	utr5	ENSMUSG00000071647	ProperStrand	19	chr15	5068442	5068478	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-8.3722
chr1	75482522	75483219	protein_coding	Obsl1	utr3	ENSMUSG00000026211	ProperStrand	23	chr17	35089183	35089253	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-7.3918
chr19	10299756	10299776	protein_coding	Gm98	intron	ENSMUSG00000036098	ProperStrand	26	chr19	8963129	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.7706
chr16	54679541	54679559	LTR	MYSERV16_I-int	ERVK	chr16MYSERV16_I-int54679027	NonProperStrand	31	chrX	98988426	98988477	antisense	Gm4779	.	ENSMUSG00000045010	ProperStrand	7	1	-18.7072
chr7	128028236	128028950	protein_coding	Eef2k	exon	ENSMUSG00000035064	ProperStrand	27	chr10	23505559	23505591	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-9.1559
chr5	144063634	144069306	protein_coding	E130309D02Rik	exon	ENSMUSG00000039244	ProperStrand	12	chr2	91436281	91436336	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-10.7683
chr2	90235293	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	158185527	158185667	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	7	-2.0560
chrX	99383312	99383633	protein_coding	Rps4x	exon	ENSMUSG00000031320	ProperStrand	139	chr4	41150096	41150144	snoRNA	ENSMUSG00000089265_SNORD121A	.	ENSMUSG00000089265	ProperStrand	370	1	-7.9892
chr15	12086090	12086154	protein_coding	Zfr	exon	ENSMUSG00000022201	ProperStrand	48	chr19	8799830	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-5.3808
chr16	85802543	85802564	protein_coding	Adamts1	exon	ENSMUSG00000022893	ProperStrand	102	chr8	32260335	32260411	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	5	-15.2084
chr7	133702376	133702466	protein_coding	Eif3c	exon	ENSMUSG00000030738	ProperStrand	92	chr3	101661101	101661118	protein_coding	Slc22a15	utr3	ENSMUSG00000033147	ProperStrand	1	1	-inf
chr8	86095768	86096132	protein_coding	Tecr	exon	ENSMUSG00000031708	ProperStrand	100	chr7	118219574	118219597	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-3.2241
chr3	29369980	29370001	protein_coding	Egfem1	intron	ENSMUSG00000063600	NonProperStrand	8	chr11	97642952	97643064	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-6.3446
chr1	136518629	136518647	protein_coding	Kdm5b	utr5	ENSMUSG00000042207	ProperStrand	223	chr10	112363891	112363907	protein_coding	Atxn7l3b	utr3	ENSMUSG00000074748	NonProperStrand	4	1	-16.3462
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr3	104880588	104880702	protein_coding	4930564D02Rik	utr5	ENSMUSG00000051788	ProperStrand	28	1	-10.2531
chr7	148378734	148378843	protein_coding	Hras1	utr5	ENSMUSG00000025499	ProperStrand	17	chr16	23110965	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	9	-19.6741
chr18	44581805	44581821	protein_coding	Dcp2	utr3	ENSMUSG00000024472	ProperStrand	44	chr1	43132316	43132332	protein_coding	Tgfbrap1	exon	ENSMUSG00000070939	ProperStrand	29	1	-15.4356
chr14	58316634	58316702	protein_coding	Lats2	intron	ENSMUSG00000021959	NonProperStrand	14	chr10	110918548	110918638	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-6.2763
chr13	19684241	19684257	protein_coding	Epdr1	utr3	ENSMUSG00000002808	ProperStrand	46	chr7	150717299	150717425	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	2	-9.8110
chr8	73826105	73826205	protein_coding	Myo9b	intron	ENSMUSG00000004677	ProperStrand	78	chr5	121655021	121655098	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.2652
chr9	114495010	114495026	protein_coding	Cnot10	utr3	ENSMUSG00000056167	ProperStrand	16	chr2	158204005	158204099	snoRNA	ENSMUSG00000065840_SNORA71	.	ENSMUSG00000065840	ProperStrand	107	1	-14.8373
chr11	33059993	33060421	protein_coding	Npm1	exon	ENSMUSG00000057113	ProperStrand	352	chr9	120039542	120039622	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	3	-2.2981
chr14	51427129	51427229	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr12	58213130	58213150	protein_coding	Slc25a21	intron	ENSMUSG00000035472	NonProperStrand	6	1	-11.9562
chr9	78055650	78056868	protein_coding	Gsta4	exon	ENSMUSG00000032348	ProperStrand	82	chr11	55296292	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	2	-9.0987
chr1	75484537	75484553	protein_coding	Obsl1	exon	ENSMUSG00000026211	NonProperStrand	192	chr5	54389950	54389967	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	1	-8.4535
chr17	29627871	29627926	protein_coding	Pim1	exon	ENSMUSG00000024014	ProperStrand	13	chr3	88715214	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-10.3360
chr11	108204937	108204953	protein_coding	Prkca	exon	ENSMUSG00000050965	ProperStrand	48	chr11	6428121	6428154	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.6010
chr1	88252836	88252898	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	chr2	130101259	130101310	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-0.7962
chr1	158837785	158837818	protein_coding	Ralgps2	exon	ENSMUSG00000026594	ProperStrand	16	chr16	23110913	23111003	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.9771
chr11	69218481	69218571	protein_coding	Kdm6b	exon	ENSMUSG00000018476	NonProperStrand	5	chr2	170315652	170315732	protein_coding	Cyp24a1	exon	ENSMUSG00000038567	ProperStrand	1	1	-inf
chr7	123616102	123616122	LTR	RMER13A	ERVK	chr7RMER13A123615886	NonProperStrand	1	chr1	162965531	162965588	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-inf
chr14	56159295	56159314	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	chr6	71896714	71896730	protein_coding	Polr1a	intron	ENSMUSG00000049553	NonProperStrand	25	1	-12.7110
mmu-miR-27a-3p	1	21	miRNA	mmu-miR-27a-3p	.	mmu-miR-27a-3p	ProperStrand	4	chr5	23358027	23358074	snoRNA	ENSMUSG00000093321_Snord93	.	ENSMUSG00000093321	ProperStrand	218	2	-inf
chr10	12834026	12834072	protein_coding	Plagl1	intron	ENSMUSG00000019817	ProperStrand	5	chr2	166890552	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	3	-19.6645
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	95524994	95525035	snoRNA	ENSMUSG00000065346_SNORA4	.	ENSMUSG00000065346	ProperStrand	142	3	-7.3693
chr6	54819114	54819222	protein_coding	Znrf2	intron	ENSMUSG00000058446	ProperStrand	13	chr15	79913288	79913313	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-6.5816
chr1	141319671	141319687	protein_coding	Zbtb41	utr5	ENSMUSG00000033964	NonProperStrand	145	chr9	120038466	120038525	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.5776
chr18	33099245	33099263	protein_coding	Camk4	intron	ENSMUSG00000038128	NonProperStrand	42	chr8	129468746	129468798	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-5.1016
chr2	58797486	58797507	protein_coding	Ccdc148	intron	ENSMUSG00000036641	ProperStrand	21	chr5	121655019	121655149	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	3	-13.5078
chr1	138178661	138178677	protein_coding	Camsap2	exon	ENSMUSG00000041570	NonProperStrand	116	chr5	121655126	121655154	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.5638
chr2	11510600	11510690	protein_coding	Rbm17	exon	ENSMUSG00000037197	ProperStrand	50	chr1	162966812	162966868	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	5	-21.9110
chr4	151475106	151475157	protein_coding	Plekhg5	intron	ENSMUSG00000039713	ProperStrand	33	chr16	55890431	55890462	protein_coding	Fam55c	intron	ENSMUSG00000075033	ProperStrand	5	4	-18.8674
chr9	71563154	71563171	protein_coding	Cgnl1	exon	ENSMUSG00000032232	ProperStrand	46	chr10	110918636	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-3.9429
chr6	146526610	146526710	protein_coding	Fgfr1op2	utr5	ENSMUSG00000040242	ProperStrand	4	chr15	79913288	79913331	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-9.1208
chr13	23842991	23843039	protein_coding	Hist1h2ab	utr5	ENSMUSG00000061615	ProperStrand	7	chr7	29136525	29136609	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	4	-20.3007
chr6	70833628	70833646	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	ProperStrand	13	chr7	118219574	118219652	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-7.1950
chr3	85941997	85942019	protein_coding	Rps3a	exon	ENSMUSG00000028081	ProperStrand	177	chr1	181027187	181027205	protein_coding	Smyd3	intron	ENSMUSG00000055067	ProperStrand	231	1	-8.4446
chr11	78133917	78134094	protein_coding	Spag5	exon	ENSMUSG00000002055	ProperStrand	49	chr5	121655063	121655127	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	3	-10.0291
chr19	10701704	10702011	protein_coding	Ddb1	utr3	ENSMUSG00000024740	ProperStrand	304	chr2	146049080	146049096	protein_coding	Insm1	exon	ENSMUSG00000068154	ProperStrand	8	1	-14.1970
chr1	31260593	31260609	protein_coding	Lgsn	exon	ENSMUSG00000050217	ProperStrand	20	chr5	121655016	121655099	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.8755
chr4	111441432	111447406	protein_coding	Spata6	exon	ENSMUSG00000034401	ProperStrand	16	chr10	23505559	23505598	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-10.2251
chr5	121827783	121827800	protein_coding	Trafd1	exon	ENSMUSG00000042726	ProperStrand	81	chr16	57391626	57391674	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	1	-9.7030
chr1	102076757	102076793	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	chr5	130300419	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	5	-2.1779
chr5	51886646	51886662	protein_coding	Ppargc1a	intron	ENSMUSG00000029167	NonProperStrand	2	chr7	140867630	140867652	protein_coding	Mmp21	exon	ENSMUSG00000030981	NonProperStrand	1	1	-inf
chr3	34529499	34529516	non_coding	Sox2ot	.	ENSMUSG00000090828	ProperStrand	25	chr1	162967735	162967782	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	1	-12.0189
chr14	8729007	8729024	protein_coding	Flnb	exon	ENSMUSG00000025278	ProperStrand	124	chr4	131866171	131866285	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-2.3748
chr6	128384184	128384204	protein_coding	Fkbp4	intron	ENSMUSG00000030357	NonProperStrand	42	chr7	116663671	116663691	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.1409
chrX	130758598	130758617	protein_coding	Trmt2b	utr3	ENSMUSG00000067369	ProperStrand	5	chr6	115757992	115758114	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-10.5899
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr19	8800087	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-1.9177
chr11	118941216	118941233	lincRNA	Gm17569	intron	ENSMUSG00000090591	ProperStrand	7	chr10	77450975	77451037	protein_coding	Pfkl	exon	ENSMUSG00000020277	ProperStrand	179	1	-15.5238
chr4	43505771	43505861	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr10	127741176	127741209	protein_coding	Pan2	utr5	ENSMUSG00000005682	ProperStrand	53	1	-3.2947
chr17	39979940	39980024	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr19	8963027	8963174	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	11	-0.7419
chr19	56464463	56464479	protein_coding	Nrap	utr5	ENSMUSG00000049134	ProperStrand	32	chr2	145076805	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-8.9862
chr11	117740132	117740151	antisense	Gm11725	.	ENSMUSG00000085434	NonProperStrand	17	chr12	24781753	24781792	protein_coding	9030624G23Rik	exon	ENSMUSG00000073158	ProperStrand	2	1	-inf
chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	chr4	116828379	116828453	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	4	-8.5173
chr8	98293483	98293688	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	chr4	152856778	152856794	protein_coding	Ajap1	utr5	ENSMUSG00000039546	ProperStrand	51	1	-10.3175
chr2	28546163	28546243	protein_coding	Tsc1	utr3	ENSMUSG00000026812	ProperStrand	29	chr7	116664856	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.8662
chr1	190267301	190267317	protein_coding	Ush2a	exon	ENSMUSG00000026609	NonProperStrand	60	chr9	78327445	78327543	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-6.3343
chr4	133240856	133240971	protein_coding	Arid1a	exon	ENSMUSG00000007880	ProperStrand	465	chr18	73693168	73693186	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	3	-5.0737
chr18	62665219	62665595	protein_coding	Fbxo38	exon	ENSMUSG00000042211	ProperStrand	18	chr19	8798504	8798550	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-7.6092
chr2	90235285	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	106640340	106640356	protein_coding	Polg2	exon	ENSMUSG00000020718	ProperStrand	12	1	-7.6663
chr5	130714087	130714132	protein_coding	0610007L01Rik	intron	ENSMUSG00000053094	ProperStrand	39	chr4	131865413	131865503	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-4.8255
chr4	130305550	130305620	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	chr10	110918548	110918638	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-1.6316
chr15	96843890	96843941	protein_coding	Slc38a4	exon	ENSMUSG00000022464	ProperStrand	139	chr7	117190037	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-1.8921
chr2	90304721	90304739	protein_coding	Ptprj	exon	ENSMUSG00000025314	ProperStrand	29	chr17	24665420	24665483	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-6.3701
chr18	73693107	73693139	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr2	130101241	130101310	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	5	-2.8719
chr2	32077449	32077497	protein_coding	Prrc2b	intron	ENSMUSG00000039262	ProperStrand	344	chr5	103584350	103584368	protein_coding	Mapk10	intron	ENSMUSG00000046709	NonProperStrand	7	1	-14.2415
chr2	57090809	57090826	protein_coding	Gpd2	utr5	ENSMUSG00000026827	ProperStrand	93	chr16	23111399	23111503	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.7189
chr6	50283214	50283231	protein_coding	Osbpl3	exon	ENSMUSG00000029822	NonProperStrand	31	chr3	88715213	88715230	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-8.5584
chr5	121657165	121657201	protein_coding	Rpl6	exon	ENSMUSG00000029614	ProperStrand	332	chr7	118219574	118219621	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-1.2744
chr19	14546831	14546852	protein_coding	Tle4	intron	ENSMUSG00000024642	ProperStrand	23	chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	1	-10.4411
chr6	87040571	87040671	protein_coding	Gfpt1	utr3	ENSMUSG00000029992	ProperStrand	22	chrX	84483699	84483716	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	12	-inf
chr2	162862384	162862400	protein_coding	Ift52	exon	ENSMUSG00000017858	NonProperStrand	6	chr7	29136525	29136654	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-11.3005
chr7	146684406	146684425	protein_coding	Inpp5a	intron	ENSMUSG00000025477	ProperStrand	166	chr17	27559700	27559717	protein_coding	Grm4	utr3	ENSMUSG00000063239	ProperStrand	147	1	-9.4742
chr7	20220310	20220670	protein_coding	Clptm1	exon	ENSMUSG00000002981	ProperStrand	109	chr1	95321935	95321980	protein_coding	Hdlbp	exon	ENSMUSG00000034088	ProperStrand	97	1	-11.1490
chr13	69751233	69751272	protein_coding	Nsun2	exon	ENSMUSG00000021595	ProperStrand	110	chr11	6428087	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.1437
mmu-miR-6240	2	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr8	87603943	87603960	protein_coding-noncoding	Wdr83	utr3	ENSMUSG00000005150	ProperStrand	2	1	-13.3349
chr7	87235230	87235293	protein_coding	Zfp710	utr3	ENSMUSG00000048897	ProperStrand	229	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-5.1044
chr11	62327987	62328087	protein_coding	Pigl	intron	ENSMUSG00000014245	ProperStrand	21	chr1	162965551	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.2774
chr11	50122409	50123922	protein_coding	Canx	exon	ENSMUSG00000020368	ProperStrand	296	chr7	148634702	148634792	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-1.2969
chr5	121140113	121140132	protein_coding	Dtx1	intron	ENSMUSG00000029603	ProperStrand	10	chr4	131908236	131908352	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-11.3530
chr11	102546812	102546828	protein_coding	Ccdc43	utr3	ENSMUSG00000020925	ProperStrand	26	chr17	35299568	35299642	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-6.4209
chr8	125813371	125813702	protein_coding	Fanca	exon	ENSMUSG00000032815	ProperStrand	32	chr9	120038616	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-7.0608
chr5	108336389	108336490	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	chr4	132394419	132394462	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	3	-3.8368
chr11	22902236	22902270	protein_coding	Cct4	exon	ENSMUSG00000007739	ProperStrand	81	chr11	98878344	98878383	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-5.6946
chr13	23951592	23951610	protein_coding	Slc17a3	utr3	ENSMUSG00000036083	ProperStrand	2	chr4	131908753	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-8.0336
chr18	35716683	35716885	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	chr10	39978273	39978470	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	34	-1.5896
chr8	109446787	109446835	protein_coding	Cirh1a	exon	ENSMUSG00000041438	ProperStrand	40	chr5	108334253	108334326	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	3	-13.0668
chr13	68759738	68764669	protein_coding	Adcy2	exon	ENSMUSG00000021536	ProperStrand	237	chr6	142442704	142444102	protein_coding	Ldhb	exon	ENSMUSG00000030246	ProperStrand	224	1	-7.9252
chr10	90076969	90076990	protein_coding	Anks1b	intron	ENSMUSG00000058589	NonProperStrand	230	chr1	162968442	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-3.5091
chr5	108759581	108759689	protein_coding	Pigg	intron	ENSMUSG00000029263	ProperStrand	11	chr7	148634701	148634749	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	3	-16.9379
chr2	121176333	121176349	protein_coding	Ppip5k1	exon	ENSMUSG00000033526	ProperStrand	85	chr15	79908957	79908985	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-4.7972
chr4	117169361	117169377	protein_coding	Rnf220	utr5	ENSMUSG00000028677	ProperStrand	131	chr7	116664811	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	4	-5.6269
chr2	75500050	75500124	protein_coding	Hnrnpa3	exon	ENSMUSG00000059005	ProperStrand	289	chr9	120038564	120038654	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-1.4390
chr8	87369871	87369906	protein_coding	Calr	exon	ENSMUSG00000003814	ProperStrand	232	chr11	67167096	67167112	protein_coding	Myh13	exon	ENSMUSG00000060180	ProperStrand	145	1	-8.8336
chr11	48615810	48615874	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	chr19	43579408	43579425	protein_coding	Got1	intron	ENSMUSG00000025190	NonProperStrand	147	1	-8.0053
chr6	108611201	108611220	protein_coding	Bhlhe40	exon	ENSMUSG00000030103	ProperStrand	11	chr12	70283842	70283942	protein_coding	Rpl36al	exon	ENSMUSG00000049751	ProperStrand	10	1	-19.9045
chr12	87847385	87855245	protein_coding	Esrrb	exon	ENSMUSG00000021255	ProperStrand	254	chr9	120038611	120038673	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-0.8332
chr2	28081796	28081815	protein_coding	Olfm1	intron	ENSMUSG00000026833	NonProperStrand	6	chr9	120038613	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	4	-19.8055
chr6	128010926	128010944	protein_coding	Tspan9	intron	ENSMUSG00000030352	ProperStrand	67	chr4	116827119	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-6.8211
chr17	81118472	81118541	protein_coding	Map4k3	intron	ENSMUSG00000024242	ProperStrand	7	chr11	62418052	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-9.9378
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr9	21483586	21490476	protein_coding	Smarca4	exon	ENSMUSG00000032187	ProperStrand	196	1	-6.2432
chr1	58463166	58463256	protein_coding	Bzw1	utr3	ENSMUSG00000051223	ProperStrand	14	chr15	34370553	34370633	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-6.3842
chr13	6594898	6594988	protein_coding-noncoding	Pfkp	utr3	ENSMUSG00000021196	ProperStrand	20	chr3	95980323	95980403	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	2	-14.4308
chr3	101395728	101395778	protein_coding	Atp1a1	exon	ENSMUSG00000033161	ProperStrand	316	chr7	52378414	52378480	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	1	-5.2255
chr10	76629035	76629076	protein_coding	Col18a1	exon	ENSMUSG00000001435	ProperStrand	287	chr4	56819129	56819147	protein_coding	BC026590	utr3	ENSMUSG00000038827	NonProperStrand	50	1	-10.5433
chr2	90235298	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	47075606	47075622	protein_coding	Ubr2	exon	ENSMUSG00000023977	ProperStrand	172	1	-2.5410
chr12	70284012	70284046	protein_coding	Rpl36al	exon	ENSMUSG00000049751	ProperStrand	10	chr16	23111372	23111485	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-10.9079
mmu-miR-1291	0	16	miRNA	mmu-miR-1291	.	mmu-miR-1291	ProperStrand	103	chr17	35299507	35299641	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	5	-15.6137
chr16	94690300	94690400	protein_coding	Ttc3	utr3	ENSMUSG00000040785	ProperStrand	47	chr11	77996560	77996623	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-6.5751
chr3	96527940	96527956	protein_coding	Polr3c	exon	ENSMUSG00000028099	NonProperStrand	75	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-8.1466
chr15	103022023	103022083	protein_coding	Cbx5	utr3	ENSMUSG00000009575	ProperStrand	98	chr12	110874245	110874291	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	1	-8.9940
chr8	18802280	18802297	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr9	15119646	15119771	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	6	-3.1851
chr5	120987613	120987629	protein_coding	Tpcn1	exon	ENSMUSG00000032741	ProperStrand	15	chr14	76245205	76245239	protein_coding	Tpt1	utr5	ENSMUSG00000060126	ProperStrand	236	1	-13.3878
chr8	125016519	125018691	protein_coding	Fam38a	exon	ENSMUSG00000014444	ProperStrand	132	chr6	124783167	124783193	protein_coding	Cdca3	utr3	ENSMUSG00000023505	ProperStrand	24	9	-19.3320
chr9	121301084	121340601	protein_coding	Trak1	exon	ENSMUSG00000032536	ProperStrand	152	chr5	74489550	74489630	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-2.1383
chr14	52919038	52919055	protein_coding	Mettl3	intron	ENSMUSG00000022160	ProperStrand	54	chr15	79908929	79908983	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-5.6789
chr12	117642759	117642828	LTR	RLTR6-int	ERV1	chr12RLTR6-int117642774	ProperStrand	3	chr7	29136609	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-inf
chr7	52713565	52713602	protein_coding	Ftl1	exon	ENSMUSG00000050708	NonProperStrand	7	chr13	49779745	49779799	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	NonProperStrand	2	1	-inf
chr1	185857228	185857244	protein_coding	1700056E22Rik	exon	ENSMUSG00000044854	ProperStrand	173	chr11	69481385	69481432	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-1.4512
chr13	70743686	70743728	protein_coding	BC018507	exon	ENSMUSG00000034525	ProperStrand	43	chr9	15119637	15119737	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	7	-inf
chr2	4859456	4859485	protein_coding	Phyh	utr3	ENSMUSG00000026664	ProperStrand	8	chr11	62416597	62416643	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-9.2486
chr12	102151967	102154789	protein_coding	Ccdc88c	exon	ENSMUSG00000021182	ProperStrand	151	chr8	73419657	73419681	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-1.5933
chr10	49845171	49845188	LINE	L1VL4	L1	chr10L1VL449844774	NonProperStrand	17	chr5	115940331	115940381	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	1	-11.2934
chr4	124123899	124123916	lincRNA	1700057H15Rik	intron	ENSMUSG00000084757	NonProperStrand	1	chr11	60755842	60756655	protein_coding	Map2k3	exon	ENSMUSG00000018932	ProperStrand	3	1	-inf
chr9	36566317	36566369	protein_coding	Stt3a	exon	ENSMUSG00000032116	ProperStrand	31	chr9	15119707	15119767	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-6.4865
chrX	7171042	7171142	protein_coding	Ccdc22	utr3	ENSMUSG00000031143	ProperStrand	4	chr3	123210854	123210899	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-7.3786
chr15	5980206	5980274	LINE	Lx7	L1	chr15Lx75980203	ProperStrand	5	chr7	118219704	118219740	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	5	-inf
chr10	114843506	114843569	protein_coding	Zfc3h1	utr5	ENSMUSG00000034163	ProperStrand	58	chr8	125418803	125418819	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	1	-9.6841
chr7	38265482	38265498	protein_coding	Zfp536	exon	ENSMUSG00000043456	NonProperStrand	236	chr4	131865393	131865493	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-1.6363
chr15	96250551	96250576	protein_coding	Scaf11	exon	ENSMUSG00000033228	ProperStrand	37	chr1	162966007	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-7.5288
chr8	87340233	87340249	protein_coding	Dand5	exon	ENSMUSG00000053226	ProperStrand	34	chr15	79913307	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.6681
chr10	23506287	23506349	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	chr14	52829461	52829531	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	10	-20.9182
chr4	110630646	110630663	protein_coding	Agbl4	intron	ENSMUSG00000061298	NonProperStrand	33	chr16	23110875	23110906	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.9284
chr5	20457470	20457531	protein_coding	Rsbn1l	exon	ENSMUSG00000039968	ProperStrand	17	chr6	145564547	145564563	protein_coding	Tuba3b	utr5	ENSMUSG00000067338	ProperStrand	152	1	-14.0107
chr11	76335908	76335924	protein_coding	Abr	intron	ENSMUSG00000017631	NonProperStrand	8	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-11.8681
chr11	87172190	87172206	protein_coding	Ppm1e	exon	ENSMUSG00000046442	ProperStrand	112	chr11	106362307	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-4.6314
chr17	26205224	26205281	protein_coding	Rab11fip3	exon	ENSMUSG00000037098	ProperStrand	32	chr10	23505165	23505255	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.1928
chr4	43013045	43013071	protein_coding	Vcp	utr5	ENSMUSG00000028452	ProperStrand	108	chr7	116664809	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.5990
chr8	37647694	37647759	protein_coding	Dlc1	exon	ENSMUSG00000031523	ProperStrand	89	chr3	82816758	82816774	protein_coding	Fgg	exon	ENSMUSG00000033860	NonProperStrand	321	1	-9.1618
chr19	23332023	23332040	protein_coding	Smc5	exon	ENSMUSG00000024943	ProperStrand	146	chr1	162965530	162965591	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.7672
chr5	111121066	111121095	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	chr14	52829497	52829569	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	5	-8.9626
chr5	125498026	125548303	protein_coding	Ncor2	utr3	ENSMUSG00000029478	ProperStrand	377	chr5	74489543	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	2	-1.7103
chr2	4829164	4829180	protein_coding	Sephs1	utr3	ENSMUSG00000026662	NonProperStrand	271	chr11	69481330	69481467	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-1.7392
chr12	52474931	52474989	protein_coding	G2e3	utr3	ENSMUSG00000035293	ProperStrand	53	chr9	120037905	120037991	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-4.9453
chr2	32537517	32537617	protein_coding	Eng	utr3	ENSMUSG00000026814	ProperStrand	29	chr1	24621519	24621554	protein_coding	Gm10925	utr5	ENSMUSG00000090378	ProperStrand	320	1	-11.4281
chr16	11144141	11144231	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr4	25207910	25208833	protein_coding	1810074P20Rik	exon	ENSMUSG00000040359	ProperStrand	10	1	-14.1233
chr16	37522779	37522856	protein_coding	Gtf2e1	intron	ENSMUSG00000022828	ProperStrand	16	chr16	23111384	23111418	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.4608
chr15	75889641	75889930	protein_coding	Scrib	exon	ENSMUSG00000022568	ProperStrand	154	chr11	68874381	68874398	protein_coding	2310047M10Rik	utr3	ENSMUSG00000045176	ProperStrand	7	1	-15.8621
chr9	64024929	64024965	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	chr5	130295451	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-1.5476
chr5	45888176	45888630	protein_coding	Lap3	exon	ENSMUSG00000039682	ProperStrand	87	chr12	110923175	110923242	snoRNA	ENSMUSG00000084487_SNORD113	.	ENSMUSG00000084487	ProperStrand	183	1	-10.3295
chr19	4318624	4318710	protein_coding	Kdm2a	utr3	ENSMUSG00000054611	ProperStrand	71	chr1	63225671	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	5	-inf
chr10	41644311	41644329	protein_coding	Armc2	exon	ENSMUSG00000071324	ProperStrand	281	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	2	-6.1267
chr9	66255883	66255899	protein_coding	Herc1	exon	ENSMUSG00000038664	NonProperStrand	35	chr16	23111451	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.0755
chr4	31856733	31856750	LINE	Lx7	L1	chr4Lx731856435	NonProperStrand	14	chr9	57644424	57644476	protein_coding	Arid3b	exon	ENSMUSG00000004661	ProperStrand	39	1	-17.1034
chr15	12251522	12251538	protein_coding	Golph3	exon	ENSMUSG00000022200	ProperStrand	35	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-10.4559
chr5	38193677	38193696	LINE	Lx9	L1	chr5Lx938193641	ProperStrand	3	chrX	91434725	91434768	protein_coding	Eif2s3x	utr3	ENSMUSG00000035150	ProperStrand	55	1	-19.3719
chr11	70840442	70840470	protein_coding	Mis12	utr3	ENSMUSG00000040599	ProperStrand	12	chr10	23505152	23505279	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-6.7989
chr2	119177287	119177367	protein_coding	Chac1	exon	ENSMUSG00000027313	ProperStrand	22	chr8	98269956	98270046	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-7.5392
chr5	77738902	77738918	protein_coding	Noa1	exon	ENSMUSG00000036285	ProperStrand	147	chr9	15130903	15130948	snoRNA	ENSMUSG00000077394_snoU2_19	.	ENSMUSG00000077394	ProperStrand	96	1	-10.5703
chr8	13171222	13171256	protein_coding	Lamp1	exon	ENSMUSG00000031447	ProperStrand	92	chr11	113280387	113280406	protein_coding	Slc39a11	intron	ENSMUSG00000041654	ProperStrand	25	1	-14.2306
chr14	47808947	47808963	protein_coding	Gch1	utr5	ENSMUSG00000037580	NonProperStrand	31	chr17	24857716	24857775	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.4661
chr13	17896513	17896603	protein_coding	Cdk13	utr5	ENSMUSG00000041297	ProperStrand	29	chr5	130300473	130300553	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-6.4831
chr11	69550815	69550951	protein_coding	Polr2a	exon	ENSMUSG00000005198	ProperStrand	200	chr2	26768393	26768433	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-3.3184
chr13	64863287	64863304	protein_coding	Cntnap3	exon	ENSMUSG00000033063	ProperStrand	87	chr9	120038615	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-4.2350
chr8	113662267	113662289	lincRNA	9430091E24Rik	intron	ENSMUSG00000084808	NonProperStrand	4	chr9	15119722	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-8.0470
chr4	11098315	11098369	protein_coding	Trp53inp1	utr3	ENSMUSG00000028211	ProperStrand	35	chr9	83678800	83681879	protein_coding	Elovl4	exon	ENSMUSG00000032262	ProperStrand	159	1	-12.4462
chr9	14638100	14638200	protein_coding	Mre11a	utr3	ENSMUSG00000031928	ProperStrand	20	chr16	23110968	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.6223
chr6	6060008	6064014	protein_coding	Slc25a13	exon	ENSMUSG00000015112	ProperStrand	78	chr5	130300436	130300516	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-3.7313
chr19	17311732	17311812	LTR	RMER2	ERV1	chr19RMER217311385	ProperStrand	1	chr3	19445232	19445323	protein_coding	Dnajc5b	intron	ENSMUSG00000027606	ProperStrand	2	1	-inf
chr1	59821480	59924392	protein_coding	Bmpr2	exon	ENSMUSG00000067336	ProperStrand	11	chr17	24857717	24857851	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	6	-19.6363
chr15	81110991	81111009	SINE	ID4	ID	chr15ID481110956	ProperStrand	272	chr15	79908930	79908955	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-2.6561
chr7	123267354	123267389	protein_coding	Plekha7	utr3	ENSMUSG00000045659	ProperStrand	66	chr3	123210854	123210940	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-5.3313
chr13	9833559	9833658	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr1	172975142	172975189	tRNA	tRNA699-GlyGCC	.	156992	ProperStrand	660	1	-0.9204
chr19	44188470	44188550	snoRNA	ENSMUSG00000077391_SNORA12	.	ENSMUSG00000077391	ProperStrand	506	chr14	52829480	52829570	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-4.0396
chr4	32749975	32753370	protein_coding	Mdn1	exon	ENSMUSG00000058006	ProperStrand	184	chr11	97642952	97643008	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-2.7724
chr8	124978777	124978794	protein_coding	Snai3	exon	ENSMUSG00000006587	ProperStrand	9	chr16	23111775	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.4225
chr12	56966967	56966985	protein_coding	Brms1l	utr3	ENSMUSG00000012076	NonProperStrand	12	chr7	117189862	117189944	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-9.4636
chr12	112779228	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	chr10	127521200	127521269	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	1	-0.9768
chr16	36071984	36072000	protein_coding	Ccdc58	utr5	ENSMUSG00000075229	NonProperStrand	55	chr18	33954815	33954894	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-3.6664
chr15	100117217	100117307	protein_coding	Tmprss12	intron	ENSMUSG00000045631	ProperStrand	2	chr17	24857723	24857803	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-9.4368
chr2	26494770	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	chr9	15117069	15117119	snoRNA	ENSMUSG00000077614_SNORA40	.	ENSMUSG00000077614	ProperStrand	54	1	-3.2978
chr4	86500795	86501776	protein_coding	Rps6	exon	ENSMUSG00000028495	ProperStrand	263	chr11	83254019	83254035	protein_coding	1700020L24Rik	exon	ENSMUSG00000035085	NonProperStrand	88	2	-15.1307
chr8	13014869	13014885	protein_coding	Mcf2l	exon	ENSMUSG00000031442	NonProperStrand	35	chr16	23111446	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.0755
chr19	60848778	60848812	protein_coding	Eif3a	exon	ENSMUSG00000024991	ProperStrand	287	chr13	90238585	90238667	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	1	-5.5511
chr9	59513714	59526625	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr5	74489552	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	6	-1.4268
chr4	42993746	42995769	protein_coding	Vcp	exon	ENSMUSG00000028452	ProperStrand	108	chr1	162967500	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	4	-8.8075
chr9	21644084	21644110	protein_coding	Dock6	exon	ENSMUSG00000032198	ProperStrand	155	chr7	36376898	36385397	protein_coding	Ankrd27	exon	ENSMUSG00000034867	ProperStrand	132	1	-9.8265
mmu-miR-6238	1	19	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr9	120039563	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	3	-3.4162
chr11	5796693	5797137	protein_coding	Myl7	exon	ENSMUSG00000020469	ProperStrand	1	chr16	23110965	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr9	98307240	98307257	protein_coding	Nmnat3	intron	ENSMUSG00000032456	NonProperStrand	19	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.4761
chr5	138753427	138753532	protein_coding	Stag3	utr3	ENSMUSG00000036928	ProperStrand	53	chr1	37898095	37898111	protein_coding	Tsga10	exon	ENSMUSG00000060771	ProperStrand	79	1	-13.0125
chr9	65049530	65049630	snRNA	ENSMUSG00000075930_U5	.	ENSMUSG00000075930	ProperStrand	175	chr4	131865868	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-0.9954
chr5	74489201	74489281	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr10	80077477	80077567	protein_coding	Scamp4	utr3	ENSMUSG00000078441	ProperStrand	54	46	-inf
chr14	58269189	58269289	protein_coding	Xpo4	intron	ENSMUSG00000021952	ProperStrand	39	chr7	29136574	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.1194
chr1	89105750	89105766	protein_coding	Chrng	exon	ENSMUSG00000026253	NonProperStrand	130	chr1	93263065	93263081	protein_coding	Fam132b	exon	ENSMUSG00000047443	NonProperStrand	98	1	-10.7750
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr4	139660817	139660836	protein_coding	Igsf21	intron	ENSMUSG00000040972	NonProperStrand	17	1	-10.3473
chr10	127558971	127559148	protein_coding	Baz2a	exon	ENSMUSG00000040054	ProperStrand	274	chr5	74489543	74489623	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-1.2495
chr14	15572351	15572370	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr9	104082506	104083337	protein_coding	Dnajc13	exon	ENSMUSG00000032560	ProperStrand	60	3	-20.4537
chr12	86473845	86473892	protein_coding	Dlst	utr3	ENSMUSG00000004789	ProperStrand	52	chr10	23505152	23505218	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-2.7146
chr10	72119351	72119414	protein_coding	Zwint	exon	ENSMUSG00000019923	ProperStrand	22	chr18	35716808	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.9687
chr3	95274214	95274242	protein_coding	Arnt	exon	ENSMUSG00000015522	ProperStrand	18	chr2	26494723	26494829	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.4011
chr11	106552290	106557296	protein_coding	Pecam1	exon	ENSMUSG00000020717	ProperStrand	56	chr11	6428035	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-5.6817
chr3	95463759	95463775	protein_coding	Mcl1	exon	ENSMUSG00000038612	ProperStrand	75	chr1	162966813	162966849	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-5.8198
chr2	30810344	30810386	protein_coding-noncoding	Tor1b	utr5	ENSMUSG00000026848	ProperStrand	1	chr4	131908235	131908272	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-inf
chr4	141030084	141030146	protein_coding	Spen	exon	ENSMUSG00000040761	ProperStrand	161	chr1	162968451	162968508	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-4.1718
chr9	96976070	96993543	protein_coding	Slc25a36	exon	ENSMUSG00000032449	ProperStrand	159	chr10	23505152	23505255	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-1.8482
chr14	76247753	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	chr13	96102571	96102661	snoRNA	ENSMUSG00000077380_SNORA68	.	ENSMUSG00000077380	ProperStrand	51	1	-4.4815
chr11	68715516	68715567	protein_coding	Rpl26	intron	ENSMUSG00000060938	ProperStrand	130	chrX	34622906	34622990	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	5	-9.3939
chr15	79913288	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr5	73607316	73607335	protein_coding	Fryl	intron	ENSMUSG00000090491	ProperStrand	4	2	-14.9731
chr4	76614453	76614470	protein_coding	Ptprd	intron	ENSMUSG00000028399	ProperStrand	198	chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	1	-9.0424
chr2	156373371	156373388	protein_coding	0610011L14Rik	utr5	ENSMUSG00000027628	NonProperStrand	9	chr1	59761674	59761696	snoRNA	ENSMUSG00000089093_Snord11	.	ENSMUSG00000089093	ProperStrand	193	1	-14.8625
chr2	84882427	84882460	protein_coding	Ssrp1	exon	ENSMUSG00000027067	ProperStrand	118	chr6	128384184	128384204	protein_coding	Fkbp4	intron	ENSMUSG00000030357	NonProperStrand	42	1	-12.6743
chr9	78023166	78023198	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr13	108679976	108680052	protein_coding	Zswim6	utr5	ENSMUSG00000032846	ProperStrand	23	4	-19.7221
chr2	130442076	130442166	protein_coding	Fastkd5	exon	ENSMUSG00000079043	ProperStrand	9	chr15	79908931	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-9.3140
chr10	90076969	90076990	protein_coding	Anks1b	intron	ENSMUSG00000058589	NonProperStrand	230	chr7	117189992	117190042	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-1.1582
chr6	57228736	57228826	LINE	Lx4A	L1	chr6Lx4A57228662	ProperStrand	1	chr6	57229346	57229426	LINE	Lx4A	L1	chr6Lx4A57229359	ProperStrand	2	1	-inf
chr1	99794120	99794138	protein_coding	Pam	intron	ENSMUSG00000026335	ProperStrand	7	chr13	75905593	75905651	snoRNA	ENSMUSG00000077449_SNORA42	.	ENSMUSG00000077449	ProperStrand	26	1	-19.4899
chr7	30972439	30972537	protein_coding	Capns1	utr3	ENSMUSG00000001794	ProperStrand	35	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.3165
chr2	158185535	158185635	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr1	9932550	9932601	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-1.4373
chr2	155645855	155645923	protein_coding	Eif6	intron	ENSMUSG00000027613	ProperStrand	42	chr2	158185530	158185606	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	8	-inf
chr1	45860787	45862252	protein_coding	Wdr75	exon	ENSMUSG00000025995	ProperStrand	24	chr12	88778655	88778735	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-8.3336
chr14	61378492	61379805	protein_coding	Spata13	exon	ENSMUSG00000021990	ProperStrand	28	chr7	132847744	132847760	protein_coding	Gtf3c1	intron	ENSMUSG00000032777	NonProperStrand	8	1	-18.2452
chr18	68020269	68022114	protein_coding	Cep192	exon	ENSMUSG00000024542	ProperStrand	59	chr3	123210878	123210968	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	5	-10.3131
chr13	93209562	93209578	protein_coding	Ankrd34b	exon	ENSMUSG00000045034	NonProperStrand	28	chr4	130305550	130305613	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	1	-11.4495
chr12	88502070	88502092	protein_coding	Gstz1	intron	ENSMUSG00000021033	ProperStrand	7	chr7	116664823	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-11.0704
chr17	67712818	67712835	LTR	ORR1E	MaLR	chr17ORR1E67712788	ProperStrand	39	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-8.6033
chr17	24869755	24869771	protein_coding	Rpl3l	utr5	ENSMUSG00000002500	NonProperStrand	56	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-9.0651
chr16	61242061	61242078	LINE	Lx9	L1	chr16Lx961241280	ProperStrand	3	chr10	8532624	8532641	protein_coding	Sash1	intron	ENSMUSG00000015305	NonProperStrand	14	1	-inf
chr17	35001073	35001090	protein_coding	Gm20547	exon	ENSMUSG00000092511	ProperStrand	9	chr16	23110981	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-5.3337
chr4	41609019	41609036	protein_coding	Cntfr	exon	ENSMUSG00000028444	NonProperStrand	2	chr9	15118246	15118322	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-10.7700
chr2	37270125	37270160	protein_coding	Rc3h2	exon	ENSMUSG00000075376	ProperStrand	35	chr11	6428059	6428159	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.1952
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr5	111121063	111121194	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	5	-3.3263
chr19	10554312	10554332	protein_coding	Ppp1r32	intron	ENSMUSG00000035179	ProperStrand	2	chr4	131908396	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-8.3123
chr7	19590197	19590213	protein_coding	Irf2bp1	exon	ENSMUSG00000044030	NonProperStrand	81	chr7	54248705	54248722	protein_coding	Spty2d1	exon	ENSMUSG00000049516	ProperStrand	20	1	-14.9296
chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	chr3	101393823	101393848	protein_coding	Atp1a1	exon	ENSMUSG00000033161	ProperStrand	316	1	-6.0978
chr12	39592601	39592633	protein_coding	Etv1	utr3	ENSMUSG00000004151	ProperStrand	2	chr6	38511787	38511808	protein_coding	Luc7l2	intron	ENSMUSG00000029823	ProperStrand	85	1	-inf
chr9	116084299	116084317	protein_coding	Tgfbr2	utr5	ENSMUSG00000032440	NonProperStrand	17	chr3	95980324	95980410	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	2	-14.9413
chr16	57221346	57221408	protein_coding	Tbc1d23	intron	ENSMUSG00000022749	ProperStrand	6	chr16	23111708	23111798	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-6.2752
chrX	150852977	150853067	LTR	RLTR10-int	ERVK	chrXRLTR10-int150852982	ProperStrand	1	chr18	9877645	9877734	protein_coding	Colec12	utr3	ENSMUSG00000036103	NonProperStrand	10	1	-inf
chr6	11850464	11856094	protein_coding	Ndufa4	exon	ENSMUSG00000029632	ProperStrand	9	chr9	120038612	120038675	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-11.0391
chr1	84280997	84281034	protein_coding	Pid1	utr5	ENSMUSG00000045658	ProperStrand	8	chr8	106976637	106976653	protein_coding	Ccdc79	exon	ENSMUSG00000052616	NonProperStrand	57	1	-17.3103
chr10	88980871	88980890	protein_coding	Nr1h4	intron	ENSMUSG00000047638	ProperStrand	9	chr4	131908686	131908750	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-15.2972
chr11	6523906	6523922	protein_coding	Tbrg4	exon	ENSMUSG00000000384	NonProperStrand	56	chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	2	-10.6528
chr5	64203925	64203942	protein_coding	0610040J01Rik	intron	ENSMUSG00000060512	ProperStrand	36	chr2	26493367	26493473	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-4.7133
chr14	35124150	35124216	protein_coding	Glud1	exon	ENSMUSG00000021794	NonProperStrand	2	chr10	23505152	23505220	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	NonProperStrand	45	1	-19.7664
chr14	16224598	16224688	protein_coding	Lrrc3b	intron	ENSMUSG00000045201	ProperStrand	10	chr17	27572140	27572220	protein_coding	Grm4	exon	ENSMUSG00000063239	ProperStrand	147	1	-15.1747
chr5	34112034	34112050	protein_coding	Letm1	exon	ENSMUSG00000005299	NonProperStrand	145	chr17	24857715	24857775	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-0.9894
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr14	55476645	55476661	protein_coding	Homez	exon	ENSMUSG00000057156	NonProperStrand	127	1	-11.6469
chr2	135360025	135360043	antisense	9630028H03Rik	.	ENSMUSG00000085631	NonProperStrand	22	chr16	23110455	23110475	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.2978
chr11	5729705	5729795	protein_coding-noncoding	Polm	utr3	ENSMUSG00000020474	ProperStrand	1	chr11	5729966	5730046	protein_coding	Polm	intron	ENSMUSG00000020474	ProperStrand	2	1	-inf
chr6	128322002	128322018	protein_coding	Foxm1	exon	ENSMUSG00000001517	NonProperStrand	66	chr14	55084481	55084512	protein_coding	Lrp10	exon	ENSMUSG00000022175	ProperStrand	19	1	-15.4572
chr2	120872244	120872260	protein_coding	Tgm5	exon	ENSMUSG00000053675	NonProperStrand	163	chr17	13184992	13185013	protein_coding	Wtap	utr5	ENSMUSG00000060475	ProperStrand	119	1	-9.9333
chr1	137481184	137481260	protein_coding	Nav1	exon	ENSMUSG00000009418	ProperStrand	38	chr14	33005138	33005214	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-4.8670
chr1	194571818	194571879	snRNA	ENSMUSG00000064881_U5	.	ENSMUSG00000064881	ProperStrand	187	chrX	34622930	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	7	-11.5396
chr2	121949511	121949527	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	1	-7.2745
chr10	95000149	95000208	protein_coding	Ube2n	intron	ENSMUSG00000074781	ProperStrand	10	chr4	131908689	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.3231
chr5	74489542	74489566	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr3	96132451	96132514	snRNA	ENSMUSG00000075978_U1	.	ENSMUSG00000075978	ProperStrand	132	1	-4.1055
chr6	94776857	94776878	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	chr9	120038016	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	2	-2.1843
chr1	45488603	45488620	protein_coding	Col5a2	intron	ENSMUSG00000026042	ProperStrand	184	chr4	116676517	116676599	protein_coding	Hectd3	utr3	ENSMUSG00000046861	ProperStrand	10	1	-14.7318
chr17	28913286	28913451	protein_coding	Mapk13	exon	ENSMUSG00000004864	ProperStrand	4	chr7	117166806	117166857	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-10.4200
chr1	162967515	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	chr5	147646721	147646798	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	5	-1.5463
chr18	35395517	35395585	protein_coding	Ctnna1	intron	ENSMUSG00000037815	ProperStrand	115	chr3	123210854	123210886	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.1057
chr5	92482907	92482987	protein_coding	G3bp2	utr3	ENSMUSG00000029405	ProperStrand	78	chr10	126737016	126737106	protein_coding	Mars	exon	ENSMUSG00000040354	ProperStrand	38	2	-20.8035
chr6	37619922	37620012	SINE	B1_Mus1	Alu	chr6B1_Mus137619916	ProperStrand	1	chr1	92105704	92105794	protein_coding	Cxcr7	intron	ENSMUSG00000044337	ProperStrand	1	1	-inf
chr2	165904622	165904638	protein_coding	Sulf2	exon	ENSMUSG00000006800	ProperStrand	171	chr18	75979994	75980012	protein_coding	Zbtb7c	utr5	ENSMUSG00000044646	ProperStrand	64	1	-11.0818
chr2	158182156	158182221	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	chr1	129271714	129271814	snoRNA	ENSMUSG00000065687_snoU6-53	.	ENSMUSG00000065687	ProperStrand	78	1	-4.4979
chr2	155921625	155921673	protein_coding	Rbm12	exon	ENSMUSG00000089824	ProperStrand	26	chr11	62418037	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	3	-16.3602
chr9	122924415	122924515	protein_coding	Kif15	intron	ENSMUSG00000036768	ProperStrand	46	chr15	79913288	79913334	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.0895
chr8	38049667	38049683	LTR	MLT1A0	MaLR	chr8MLT1A038049422	NonProperStrand	91	chr9	120038467	120038492	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.3162
chr5	22080666	22080744	lincRNA	6030443J06Rik	intron	ENSMUSG00000087558	ProperStrand	19	chr4	131866155	131866245	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	5	-20.1489
chr10	87820027	87820043	protein_coding	Dram1	intron	ENSMUSG00000020057	ProperStrand	24	chr16	23110904	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.6072
chr4	131908416	131908463	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr2	144087324	144087357	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-1.1520
chr14	51463983	51463999	protein_coding	Tep1	exon	ENSMUSG00000006281	NonProperStrand	73	chr19	8798501	8798524	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-4.8319
chr4	43505657	43505723	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr7	3155564	3155664	protein_coding	AU018091	utr3	ENSMUSG00000054753	ProperStrand	42	3	-9.2099
chr3	79625109	79625125	protein_coding	Tmem144	intron	ENSMUSG00000027956	NonProperStrand	1	chr11	6428099	6428154	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-inf
chr9	21934462	21934478	protein_coding	Acp5	exon	ENSMUSG00000001348	ProperStrand	66	chr9	15119631	15119713	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.4657
chr8	77640560	77640610	protein_coding	Mcm5	intron	ENSMUSG00000005410	ProperStrand	199	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-3.5765
chr14	33015448	33015525	protein_coding	Parg	exon	ENSMUSG00000021911	ProperStrand	33	chr9	15119382	15119425	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	2	-10.2093
chr19	42022497	42022558	protein_coding	Mms19	intron	ENSMUSG00000025159	ProperStrand	52	chr16	23111705	23111805	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.1343
chr4	3762360	3762427	protein_coding	Rps20	exon	ENSMUSG00000028234	ProperStrand	71	chr10	127560801	127560821	protein_coding	Baz2a	intron	ENSMUSG00000040054	ProperStrand	274	1	-9.9307
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr15	98604924	98606960	protein_coding	Wnt10b	exon	ENSMUSG00000022996	NonProperStrand	189	4	-8.6385
chr13	96100626	96100726	protein_coding	Zbed3	intron	ENSMUSG00000041995	ProperStrand	33	chr16	23111451	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.1725
chr18	36957577	36957594	protein_coding	Zmat2	exon	ENSMUSG00000001383	ProperStrand	25	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-10.3603
chr9	47607506	47607596	protein_coding	Cadm1	utr5	ENSMUSG00000032076	ProperStrand	77	chr9	64023225	64023305	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	1	-7.9465
chr14	26368228	26368244	lincRNA	Gm17670	exon	ENSMUSG00000091696	ProperStrand	2	chr12	70258784	70259672	protein_coding	Rps29	exon	ENSMUSG00000034892	ProperStrand	124	2	-inf
chr11	84727782	84729784	protein_coding	Znhit3	exon	ENSMUSG00000020526	ProperStrand	2	chr3	96132420	96132514	snRNA	ENSMUSG00000075978_U1	.	ENSMUSG00000075978	ProperStrand	132	1	-19.2785
chr4	129497793	129497811	protein_coding	Ptp4a2	utr5	ENSMUSG00000028788	NonProperStrand	2	chr6	70794802	70794820	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	1	-19.4488
chr11	93995058	93995158	lincRNA	B230206L02Rik	intron	ENSMUSG00000086003	ProperStrand	13	chr15	34371038	34371098	protein_coding	Rpl30	exon	ENSMUSG00000058600	ProperStrand	65	1	-16.2777
chr2	152105761	152105777	protein_coding	Csnk2a1	utr3	ENSMUSG00000074698	ProperStrand	91	chr2	158185574	158185666	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-5.6666
chr11	87913128	87913145	processed_transcript	2210416O15Rik	.	ENSMUSG00000087498	ProperStrand	76	chr16	14466217	14466271	protein_coding	Abcc1	utr5	ENSMUSG00000023088	ProperStrand	35	1	-13.9298
chr10	80049685	80049735	protein_coding	Fam108a	utr5	ENSMUSG00000003346	ProperStrand	14	chr4	63389602	63389618	protein_coding	Tnfsf15	utr3	ENSMUSG00000050395	NonProperStrand	121	1	-14.8668
chr14	45949538	45949554	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	chr6	115758044	115758120	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-2.3476
chr4	140670554	140670587	protein_coding	D4Ertd22e	utr3	ENSMUSG00000040842	ProperStrand	23	chr7	116663653	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-7.1759
chr8	109430033	109430133	protein_coding	Cirh1a	exon	ENSMUSG00000041438	ProperStrand	40	chr4	131908236	131908297	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.0419
chr5	152445628	152445653	protein_coding	Rfc3	exon	ENSMUSG00000033970	ProperStrand	38	chr11	4820972	4820990	protein_coding	Thoc5	intron	ENSMUSG00000034274	ProperStrand	325	1	-10.8490
chr5	115848210	115848227	antisense	Gm13832	.	ENSMUSG00000087292	ProperStrand	47	chr1	162965981	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-4.0601
chr2	103294798	103294898	protein_coding	Cat	utr3	ENSMUSG00000027187	ProperStrand	10	chr4	131908356	131908421	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.5892
chr19	5624270	5624360	LTR	MLT2B2	ERVL	chr19MLT2B25624289	NonProperStrand	1	chr19	5624605	5624695	LTR	RLTR10A	ERVK	chr19RLTR10A5624371	NonProperStrand	1	1	-inf
chr13	8972087	8972109	protein_coding	Gtpbp4	utr3	ENSMUSG00000021149	ProperStrand	26	chr4	131908689	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.5345
chr8	108059235	108059268	protein_coding	Atp6v0d1	intron	ENSMUSG00000013160	ProperStrand	35	chr7	116664851	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	4	-11.8399
chr13	23647049	23647139	protein_coding	Hist1h1d	exon	ENSMUSG00000052565	ProperStrand	78	chr11	6428087	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.7258
chr3	151888507	151888533	protein_coding	Fubp1	intron	ENSMUSG00000028034	ProperStrand	56	chr7	51505821	51505910	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	1	-8.7534
chr4	41040123	41040213	protein_coding	Aqp3	utr3	ENSMUSG00000028435	ProperStrand	14	chr7	116663634	116663714	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-5.2435
chr10	126978317	126978347	protein_coding	Lrp1	exon	ENSMUSG00000040249	ProperStrand	151	chr14	76247753	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-2.5011
chrX	70237450	70237471	miRNA	Mir2137	.	ENSMUSG00000089357	ProperStrand	50	chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	1	-9.6364
chr11	58260891	58260909	protein_coding	4930504O13Rik	exon	ENSMUSG00000052642	ProperStrand	1	chr11	6428035	6428125	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-inf
chr19	8787951	8788047	protein_coding	Slc3a2	exon	ENSMUSG00000010095	ProperStrand	63	chr9	120038635	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	4	-10.2550
chr17	88122688	88122755	protein_coding	Msh2	exon	ENSMUSG00000024151	ProperStrand	124	chr9	64023294	64023329	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	1	-6.9996
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr5	107303155	107303171	protein_coding	Hfm1	intron	ENSMUSG00000043410	ProperStrand	23	1	-13.3090
chr16	36775739	36775756	protein_coding	Slc15a2	exon	ENSMUSG00000022899	ProperStrand	13	chr12	60774058	60774109	snoRNA	ENSMUSG00000077603_SNORA3	.	ENSMUSG00000077603	ProperStrand	185	1	-14.1723
chr4	62052338	62052360	protein_coding	Slc31a1	utr3	ENSMUSG00000066150	ProperStrand	45	chr5	130300488	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	4	-10.4692
chr1	165871258	165871302	protein_coding	Scyl3	exon	ENSMUSG00000026584	ProperStrand	24	chr12	106269287	106269387	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	2	-9.6824
chr3	32314239	32314261	protein_coding	Pik3ca	intron	ENSMUSG00000027665	NonProperStrand	2	chr7	116664869	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-9.7350
chr14	31987595	31987634	protein_coding	Nisch	exon	ENSMUSG00000021910	ProperStrand	125	chr4	131908233	131908276	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-1.1647
chr5	77338145	77338225	LTR	RMER16	ERVK	chr5RMER1677337879	NonProperStrand	1	chr5	72604856	72604946	lincRNA	Atp10d	intron	ENSMUSG00000046808	NonProperStrand	3	1	-inf
chr16	23111690	23111753	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	chr13	75905594	75905651	snoRNA	ENSMUSG00000077449_SNORA42	.	ENSMUSG00000077449	ProperStrand	26	1	-3.3497
chr10	102482961	102483041	protein_coding	Alx1	intron	ENSMUSG00000036602	ProperStrand	1	chr16	94528464	94528554	protein_coding	Hlcs	intron	ENSMUSG00000040820	NonProperStrand	7	1	-inf
chr10	13282751	13282798	protein_coding	Adat2	utr3	ENSMUSG00000019808	ProperStrand	3	chr2	130103462	130103502	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	3	-inf
chr4	43505864	43505931	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr7	150082913	150082929	protein_coding	Th	exon	ENSMUSG00000000214	ProperStrand	2	1	-10.3311
chr10	127025187	127025222	protein_coding	Lrp1	exon	ENSMUSG00000040249	ProperStrand	151	chr9	120037993	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	3	-7.6136
chr8	24360691	24360750	protein_coding	Golga7	intron	ENSMUSG00000015341	ProperStrand	36	chr5	108334238	108336490	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-5.8176
chr7	120019728	120019745	protein_coding	Tead1	exon	ENSMUSG00000055320	NonProperStrand	41	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.3878
chr14	55057856	55057872	protein_coding	Mmp14	exon	ENSMUSG00000000957	ProperStrand	61	chr11	48617383	48617444	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	1	-9.7641
chr7	149562041	149562073	protein_coding	Ctsd	utr3	ENSMUSG00000007891	ProperStrand	60	chr11	120459589	120459607	protein_coding	Alyref	exon	ENSMUSG00000025134	ProperStrand	53	1	-13.5614
chr16	29620937	29621612	protein_coding	Opa1	exon	ENSMUSG00000038084	ProperStrand	33	chr3	123210852	123210932	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-7.9321
chr19	18128622	18128639	SINE	B3	B2	chr19B318128551	NonProperStrand	24	chr11	69481434	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-4.9335
chr16	57391601	57391760	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr16	23110906	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	NonProperStrand	93	6	-20.5932
chr6	39355786	39355815	protein_coding	Mkrn1	exon	ENSMUSG00000029922	ProperStrand	177	chr2	26494706	26494772	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.3446
chr12	100972307	100972397	protein_coding	2610021K21Rik	intron	ENSMUSG00000021176	ProperStrand	12	chr16	23110913	23110993	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.4686
chr1	137345619	137346480	protein_coding	Nav1	exon	ENSMUSG00000009418	NonProperStrand	60	chr11	6428107	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.1922
chr17	15663970	15663986	protein_coding	Tbp	utr3	ENSMUSG00000014767	ProperStrand	8	chr4	131908690	131908753	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.7736
chr1	127312948	127314852	protein_coding	Actr3	exon	ENSMUSG00000026341	ProperStrand	45	chr7	116664819	116664909	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	8	-21.4394
chr1	36861394	36861433	protein_coding	Tmem131	exon	ENSMUSG00000026116	ProperStrand	129	chr5	92485124	92485220	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	1	-7.2132
chr8	72350316	72350366	protein_coding	Lpar2	exon	ENSMUSG00000031861	ProperStrand	44	chr7	116664815	116664855	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.0957
chrX	16211332	16211383	protein_coding	Maoa	exon	ENSMUSG00000025037	ProperStrand	17	chr16	23110558	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-11.5751
chr4	63209677	63209717	protein_coding	Atp6v1g1	exon	ENSMUSG00000039105	ProperStrand	10	chr3	108228259	108228275	protein_coding	Sars	utr3	ENSMUSG00000068739	NonProperStrand	200	1	-14.5605
chr17	35646418	35646451	protein_coding	Pou5f1	exon	ENSMUSG00000024406	ProperStrand	104	chr7	116664870	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.6557
chr3	113827103	113827119	protein_coding	Col11a1	utr3	ENSMUSG00000027966	NonProperStrand	139	chr11	69483238	69483283	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.1604
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	56257328	56257344	LTR	RLTR25B	ERVK	chr17RLTR25B56257276	NonProperStrand	75	1	-4.0395
chr18	24363855	24363872	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr1	36400129	36400145	protein_coding	4632411B12Rik	exon	ENSMUSG00000010453	ProperStrand	24	1	-13.2261
chr11	69481390	69481480	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	chr9	40611664	40611696	snoRNA	ENSMUSG00000075876_Snord14c	.	ENSMUSG00000075876	ProperStrand	104	1	-2.2437
chr4	128752839	128752862	protein_coding	Rnf19b	utr5	ENSMUSG00000028793	ProperStrand	7	chr10	62228322	62228381	snoRNA	ENSMUSG00000080469_Snord98	.	ENSMUSG00000080469	ProperStrand	124	3	-inf
chr4	141623808	141623826	protein_coding	Tmem51	intron	ENSMUSG00000040616	ProperStrand	30	chr12	71968931	71968948	protein_coding	Frmd6	intron	ENSMUSG00000048285	ProperStrand	23	1	-16.6246
chr11	69466732	69466765	protein_coding	Fxr2	utr3	ENSMUSG00000018765	ProperStrand	40	chr9	64024527	64024568	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	1	-9.1800
chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	chr10	110918560	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-1.8418
chr17	46817681	46817698	protein_coding	Klhdc3	utr5	ENSMUSG00000063576	ProperStrand	35	chr2	144087420	144087463	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-7.6204
chr9	75951059	75951078	protein_coding	Hmgcll1	intron	ENSMUSG00000007908	ProperStrand	3	chr16	23111710	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-13.4294
chr9	43949388	43949436	protein_coding	Mcam	exon	ENSMUSG00000032135	ProperStrand	27	chr3	123210853	123210929	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	4	-11.7814
chr18	4394286	4394344	protein_coding	Mtpap	intron	ENSMUSG00000024234	ProperStrand	6	chr1	39605633	39605656	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-12.0930
chr4	128995110	128995717	protein_coding	Rbbp4	exon	ENSMUSG00000057236	ProperStrand	22	chr18	35716765	35716855	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.9687
chr8	101051320	101051336	LTR	RMER13B	ERVK	chr8RMER13B101050623	NonProperStrand	8	chr5	3693225	3693241	protein_coding	Ankib1	exon	ENSMUSG00000040351	NonProperStrand	98	1	-16.4252
chr12	33638595	33638614	lincRNA	4933406C10Rik	exon	ENSMUSG00000086543	ProperStrand	52	chr12	60141322	60141412	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-7.1139
chr18	43420081	43420098	protein_coding	Stk32a	intron	ENSMUSG00000039954	ProperStrand	5	chr17	35089183	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-10.6035
chr5	74489202	74489317	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr6	117795659	117795676	protein_coding	Zfp637	exon	ENSMUSG00000059689	NonProperStrand	53	1	-5.8654
chr3	152450608	152450628	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	chr4	56910496	56910618	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-1.9643
chr15	72517841	72517931	protein_coding	Trappc9	intron	ENSMUSG00000047921	ProperStrand	44	chr16	23110460	23110540	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.0046
chr2	164311966	164311983	protein_coding	Dbndd2	utr5	ENSMUSG00000017734	ProperStrand	53	chr7	117189864	117189932	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-6.4546
chr7	26099937	26099953	protein_coding	Tmem145	intron	ENSMUSG00000043843	ProperStrand	24	chr7	19591412	19591428	protein_coding	Irf2bp1	exon	ENSMUSG00000044030	NonProperStrand	81	1	-14.5705
chr15	20896519	20896538	Low_complexity	GA-rich	Low_complexity	chr15GA-rich20896433	ProperStrand	1	chr11	6428054	6428088	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-inf
chr11	115427985	115428033	protein_coding	Nup85	exon	ENSMUSG00000020739	ProperStrand	33	chr6	35239916	35251726	protein_coding	Slc13a4	exon	ENSMUSG00000029843	ProperStrand	19	1	-16.7928
chr11	80269877	80274103	protein_coding	Psmd11	exon	ENSMUSG00000017428	ProperStrand	34	chr10	110918634	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-7.5360
chr2	157141870	157141910	protein_coding	Rpn2	exon	ENSMUSG00000027642	ProperStrand	363	chr15	79913288	79913320	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-0.7753
chr10	120709244	120712786	protein_coding	Tbc1d30	exon	ENSMUSG00000052302	ProperStrand	233	chr9	64023677	64023746	snoRNA	ENSMUSG00000064918_SNORD18	.	ENSMUSG00000064918	ProperStrand	370	1	-6.9650
chr11	115177157	115177174	protein_coding	Ush1g	utr3	ENSMUSG00000045288	ProperStrand	4	chr16	23111768	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-12.0512
chr7	34990867	34990883	protein_coding	Gpi1	exon	ENSMUSG00000036427	ProperStrand	288	chr11	98878388	98878456	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-3.2908
chr3	96073046	96073075	antisense	RP24-201C14.10	.	ENSMUSG00000093656	NonProperStrand	1	chr14	76247711	76247756	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-inf
chr8	127353807	127353824	protein_coding	Trim67	utr3	ENSMUSG00000036913	NonProperStrand	8	chr1	162968447	162968464	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-10.1853
chr13	74471849	74474847	protein_coding	Sdha	exon	ENSMUSG00000021577	ProperStrand	70	chr4	131908235	131908285	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.2038
chr7	148446444	148446512	protein_coding	Phrf1	exon	ENSMUSG00000038611	ProperStrand	86	chr4	131908236	131908276	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-3.0663
chr1	90161280	90161316	protein_coding	Hjurp	utr3	ENSMUSG00000044783	ProperStrand	110	chr4	131865938	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.9250
chr7	85685214	85685232	protein_coding	Ntrk3	intron	ENSMUSG00000059146	ProperStrand	8	chr19	8963027	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-6.1145
chr4	124335748	124335828	protein_coding	Pou3f1	exon	ENSMUSG00000078236	ProperStrand	5	chr11	6428077	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-8.1751
chr2	86930508	86930598	LINE	Lx2B	L1	chr2Lx2B86930192	ProperStrand	1	chr2	86930711	86930791	LINE	Lx2B	L1	chr2Lx2B86930622	NonProperStrand	1	1	-inf
chr11	36140937	36140955	protein_coding	Odz2	intron	ENSMUSG00000049336	ProperStrand	106	chr4	131908357	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.7009
chr5	135720679	135720769	protein_coding	Baz1b	utr3	ENSMUSG00000002748	ProperStrand	83	chr6	71832599	71832689	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-4.9798
chr11	45957405	45957485	protein_coding	Adam19	utr3	ENSMUSG00000011256	ProperStrand	134	chr11	6428077	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.8281
chr2	35522434	35522451	protein_coding	Dab2ip	intron	ENSMUSG00000026883	NonProperStrand	58	chr19	8963113	8963179	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.3317
chr17	47104176	47104237	protein_coding	Ubr2	exon	ENSMUSG00000023977	ProperStrand	172	chr8	32260333	32260423	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-2.6922
chr6	83919212	83926216	protein_coding	Zfml	exon	ENSMUSG00000030016	ProperStrand	45	chr4	116826698	116826730	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-7.3544
chr11	103043025	103043042	protein_coding	Fmnl1	exon	ENSMUSG00000055805	ProperStrand	26	chr2	166889034	166889056	snoRNA	ENSMUSG00000077515_SNORD12	.	ENSMUSG00000077515	ProperStrand	191	1	-12.6831
chr19	44188461	44188583	snoRNA	ENSMUSG00000077391_SNORA12	.	ENSMUSG00000077391	ProperStrand	506	chr3	68889026	68889141	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	3	-1.3290
chr12	70405554	70406654	protein_coding	Klhdc2	exon	ENSMUSG00000020978	ProperStrand	13	chr9	15118325	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-6.4467
chr19	42339611	42339630	protein_coding	Golga7b	intron	ENSMUSG00000042532	NonProperStrand	3	chr14	52626060	52626079	protein_coding	Zfp219	utr3	ENSMUSG00000049295	ProperStrand	27	1	-21.2276
chr2	164650649	164650739	protein_coding	Zswim1	exon	ENSMUSG00000017764	ProperStrand	68	chr19	8800355	8800435	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-3.3007
chr18	48207204	48207251	protein_coding	Gm5506	exon	ENSMUSG00000059040	ProperStrand	105	chr11	83107805	83107875	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	3	-17.2934
chr7	29199254	29199328	protein_coding	Samd4b	exon	ENSMUSG00000037513	ProperStrand	72	chr7	148634807	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-6.1803
chr3	145170672	145170688	protein_coding	Col24a1	exon	ENSMUSG00000028197	ProperStrand	33	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.7641
chr11	100275659	100275677	protein_coding	Leprel4	exon	ENSMUSG00000006931	ProperStrand	32	chr7	13511149	13511763	protein_coding	Rps5	exon	ENSMUSG00000012848	ProperStrand	108	1	-13.4036
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr8	28265119	28265165	protein_coding	Rab11fip1	exon	ENSMUSG00000031488	ProperStrand	8	1	-11.1491
chr6	135179424	135179453	protein_coding	8430419L09Rik	intron	ENSMUSG00000030207	NonProperStrand	5	chr6	71832629	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-10.7330
chr10	61863226	61863245	protein_coding	Hkdc1	exon	ENSMUSG00000020080	NonProperStrand	3	chr3	123210906	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-8.0648
chr9	50816824	50816841	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	chr18	33954817	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-3.9137
chr14	52899258	52899322	protein_coding	Tox4	utr5	ENSMUSG00000016831	ProperStrand	16	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	4	-19.5715
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr14	55476645	55476661	protein_coding	Homez	exon	ENSMUSG00000057156	NonProperStrand	127	2	-11.9035
chr5	115236810	115239325	protein_coding	Ankrd13a	exon	ENSMUSG00000041870	NonProperStrand	11	chr4	131865855	131865910	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.8470
chrX	115443369	115443385	LINE	Lx3A	L1	chrXLx3A115443230	NonProperStrand	12	chr17	27699382	27699411	protein_coding	Hmga1	exon	ENSMUSG00000046711	ProperStrand	180	1	-14.3916
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr12	17552949	17553029	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	3	-3.3366
chr16	49001728	49001921	protein_coding	C330027C09Rik	exon	ENSMUSG00000033031	ProperStrand	30	chr7	29136543	29136655	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	13	-inf
chr19	5381262	5381717	protein_coding	Sart1	exon	ENSMUSG00000039148	ProperStrand	32	chr5	130295428	130295508	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-6.4875
chr1	162965995	162966044	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	chr13	90238585	90238722	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	6	-4.0230
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr5	34112034	34112050	protein_coding	Letm1	exon	ENSMUSG00000005299	NonProperStrand	145	1	-9.6003
chrX	96963606	96963624	SINE	B1_Mur1	Alu	chrXB1_Mur196963497	NonProperStrand	2	chr16	16312964	16313045	protein_coding	Dnm1l	utr3	ENSMUSG00000022789	ProperStrand	29	2	-inf
chr11	106682043	106682133	protein_coding	Smurf2	utr3	ENSMUSG00000018363	ProperStrand	79	chr18	35716734	35716814	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.7309
chr9	60717510	60717610	protein_coding	Uaca	exon	ENSMUSG00000034485	ProperStrand	109	chr9	120038005	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-3.5803
chr9	21379796	21379886	protein_coding-noncoding	Carm1	utr5	ENSMUSG00000032185	ProperStrand	1	chr19	8963092	8963172	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-inf
chr8	47072335	47072367	protein_coding	Ufsp2	intron	ENSMUSG00000031634	ProperStrand	1	chr11	69483136	69483231	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-inf
chr6	5991778	5991807	protein_coding	Slc25a13	utr3	ENSMUSG00000015112	ProperStrand	78	chr17	35089182	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-4.9753
chr9	120926450	120926467	protein_coding	Ulk4	intron	ENSMUSG00000040936	NonProperStrand	18	chr9	15130705	15130743	snoRNA	ENSMUSG00000077506_Scarna9	.	ENSMUSG00000077506	ProperStrand	148	1	-13.9419
chr6	88423179	88429214	protein_coding	Ruvbl1	exon	ENSMUSG00000030079	ProperStrand	24	chr1	155287317	155287356	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	1	-10.8312
chr9	95525011	95525035	antisense	Gm16126	.	ENSMUSG00000086585	NonProperStrand	229	chr4	131865380	131865459	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-1.6818
chr2	80161335	80161390	protein_coding	Dnajc10	intron	ENSMUSG00000027006	ProperStrand	36	chr2	26493362	26493446	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-4.7133
chr12	88613904	88613994	protein_coding	Ahsa1	intron	ENSMUSG00000021037	ProperStrand	58	chr12	17552959	17553039	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-5.1550
chr15	76175511	76175527	protein_coding	Cyc1	exon	ENSMUSG00000022551	ProperStrand	47	chr5	73570319	73570335	protein_coding	Fryl	intron	ENSMUSG00000070733	NonProperStrand	10	1	-17.6438
chr13	76156115	76156132	protein_coding	Rfesd	utr5	ENSMUSG00000043190	ProperStrand	30	chr2	26494709	26494826	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.4006
chr4	118151834	118151924	protein_coding-noncoding	Tie1	utr3	ENSMUSG00000033191	NonProperStrand	1	chr4	118151661	118151751	protein_coding	Tie1	exon	ENSMUSG00000033191	NonProperStrand	2	1	-inf
chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr13	23618322	23618359	tRNA	tRNA948-ArgTCG	.	275340	ProperStrand	26	3	-11.5973
chr1	152268927	152269668	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	chr13	43494025	43494152	protein_coding	Nol7	exon	ENSMUSG00000063200	ProperStrand	4	1	-14.5758
chr17	57160597	57160660	protein_coding	Khsrp	utr3	ENSMUSG00000007670	ProperStrand	353	chr7	144637259	144637287	protein_coding	Glrx3	intron	ENSMUSG00000031068	ProperStrand	35	2	-17.1230
chr18	73693167	73693189	rRNA	n-R5-8s1	.	ENSMUSG00000065922	NonProperStrand	5	chr8	73419657	73419790	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	NonProperStrand	53	2	-19.0274
chr18	85948220	85948309	LINE	Lx7	L1	chr18Lx785948064	ProperStrand	1	chr18	85947978	85948058	LTR	MTB_Mm	MaLR	chr18MTB_Mm85947660	NonProperStrand	1	1	-inf
chr4	126703409	126703426	protein_coding	Sfpq	exon	ENSMUSG00000028820	ProperStrand	340	chr14	60842230	60847569	protein_coding	Nupl1	exon	ENSMUSG00000063895	ProperStrand	16	1	-12.5243
chr9	10011922	10012012	protein_coding	Cntn5	intron	ENSMUSG00000039488	ProperStrand	12	chr5	116650720	116650800	protein_coding	Ccdc60	intron	ENSMUSG00000043913	ProperStrand	8	1	-19.1875
chrX	71612104	71612123	protein_coding	Ubl4	utr3	ENSMUSG00000015290	ProperStrand	16	chr1	89673698	89673788	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	4	-17.9802
chr4	43505656	43505927	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr17	57162183	57164997	protein_coding	Khsrp	exon	ENSMUSG00000007670	ProperStrand	353	48	-inf
chr1	162966818	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	chr13	49779667	49779746	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	5	-5.4375
chr17	35299507	35299597	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	chr2	158184114	158184194	snoRNA	ENSMUSG00000064995_SNORA71	.	ENSMUSG00000064995	ProperStrand	430	1	-1.3592
chr15	103022034	103022067	protein_coding	Cbx5	utr3	ENSMUSG00000009575	ProperStrand	98	chr5	112758435	112758451	protein_coding	Tfip11	exon	ENSMUSG00000029345	ProperStrand	111	1	-11.0919
chr5	30092168	30092911	protein_coding	Dnajb6	exon	ENSMUSG00000029131	ProperStrand	81	chr15	34370601	34370622	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-3.0044
chr6	47746378	47746490	protein_coding	Pdia4	utr3	ENSMUSG00000025823	ProperStrand	41	chr7	116663734	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.1845
chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	chr4	154261996	154263621	protein_coding	Mmel1	exon	ENSMUSG00000058183	ProperStrand	6	1	-14.2028
chr4	149023355	149023371	protein_coding	Pik3cd	utr3	ENSMUSG00000039936	NonProperStrand	17	chr4	131908809	131908902	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.3002
chr6	113121203	113121220	protein_coding	Lhfpl4	utr3	ENSMUSG00000042873	ProperStrand	47	chr2	130101972	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	6	-inf
chr5	108857380	108857396	protein_coding-noncoding	Pde6b	utr5	ENSMUSG00000029491	ProperStrand	1	chr4	131865855	131865925	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr2	38012954	38012970	protein_coding	Dennd1a	intron	ENSMUSG00000035392	NonProperStrand	128	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	2	-12.5420
chr18	34792078	34792136	protein_coding	Kif20a	exon	ENSMUSG00000003779	ProperStrand	50	chr10	62228322	62228360	snoRNA	ENSMUSG00000080469_Snord98	.	ENSMUSG00000080469	ProperStrand	124	1	-12.2237
chr17	37146575	37147246	protein_coding	Zfp57	exon	ENSMUSG00000036036	ProperStrand	39	chr16	23110964	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-2.5911
chr14	61310028	61310128	protein_coding	Spata13	exon	ENSMUSG00000021990	ProperStrand	28	chr5	130300536	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-6.5864
chr4	118781560	118793038	protein_coding	Slc2a1	exon	ENSMUSG00000028645	ProperStrand	361	chr1	162967537	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-1.4741
chr4	63211296	63211313	protein_coding	Atp6v1g1	utr3	ENSMUSG00000039105	NonProperStrand	24	chr4	131908689	131908806	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-7.0848
chr6	124761245	124761262	protein_coding	Tpi1	utr3	ENSMUSG00000023456	NonProperStrand	7	chr16	23110874	23110945	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-9.3151
chr11	98865467	98865522	protein_coding	Top2a	exon	ENSMUSG00000020914	ProperStrand	324	chr15	8109319	8109336	protein_coding	Nup155	utr3	ENSMUSG00000022142	NonProperStrand	8	1	-14.0733
chr13	100202133	100204422	protein_coding	Mtap1b	exon	ENSMUSG00000052727	ProperStrand	76	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-2.3829
chr2	149786697	149786714	protein_coding	Tmem90b	intron	ENSMUSG00000074736	NonProperStrand	6	chr18	73693114	73693134	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-10.2391
chrX	115443369	115443385	LINE	Lx3A	L1	chrXLx3A115443230	NonProperStrand	12	chr14	31827504	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-10.2099
chr15	57954075	57954155	protein_coding	Atad2	exon	ENSMUSG00000022360	ProperStrand	47	chr11	69481365	69481455	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	10	-inf
chr9	21200704	21201935	protein_coding	Ilf3	exon	ENSMUSG00000032178	ProperStrand	164	chr5	130295415	130295495	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-3.3483
chr8	59934835	59934852	protein_coding	Scrg1	utr5	ENSMUSG00000031610	NonProperStrand	10	chr5	121655099	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-7.2897
chr5	100855902	100855965	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr9	120037723	120038337	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	3	-7.6891
chr16	17849700	17849790	protein_coding	Dgcr2	exon	ENSMUSG00000003166	ProperStrand	45	chr10	90581059	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-5.3660
chr1	26182058	26182138	LINE	L1_Mm	L1	chr1L1_Mm26181265	ProperStrand	1	chr1	26182174	26182264	SINE	B1_Mm	Alu	chr1B1_Mm26182167	ProperStrand	1	1	-inf
chrX	159211179	159211377	protein_coding	Rbbp7	exon	ENSMUSG00000031353	ProperStrand	48	chr4	116827010	116827309	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	1	-10.8078
chr5	77386643	77386733	protein_coding	Paics	intron	ENSMUSG00000029247	ProperStrand	78	chr5	53950350	53950440	protein_coding	Rbpj	intron	ENSMUSG00000039191	ProperStrand	96	1	-11.8416
chr16	98284291	98284391	LINE	L1_Mus1	L1	chr16L1_Mus198283327	ProperStrand	23	chr19	8798743	8798797	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-6.6913
chr11	60368667	60368761	protein_coding	Alkbh5	utr3	ENSMUSG00000042650	ProperStrand	203	chr10	59645188	59645205	protein_coding	Chst3	utr3	ENSMUSG00000057337	ProperStrand	10	1	-14.5368
chr1	34285812	34285877	protein_coding	Dst	exon	ENSMUSG00000026131	ProperStrand	461	chr2	162356087	162356104	protein_coding	Ptprt	intron	ENSMUSG00000053141	NonProperStrand	46	1	-9.7651
chr11	3417959	3424667	protein_coding	Smtn	intron	ENSMUSG00000020439	ProperStrand	222	chr4	131908809	131908904	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-1.5457
chr10	80291790	80291890	protein_coding	Oaz1	utr3	ENSMUSG00000035242	ProperStrand	49	chr1	162965981	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-3.9815
chr9	118282315	118282332	LTR	MTEb	MaLR	chr9MTEb118282227	NonProperStrand	2	chr8	97894121	97894612	protein_coding	Mmp15	exon	ENSMUSG00000031790	ProperStrand	13	2	-inf
chr3	68889334	68889369	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	chrX	133124944	133124977	tRNA	tRNA375-AlaTGC	.	1656176	ProperStrand	1	1	-inf
chr16	20716464	20716480	protein_coding-noncoding	Clcn2	utr5	ENSMUSG00000022843	NonProperStrand	4	chr1	39605591	39605683	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	2	-inf
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr12	77923183	77923202	protein_coding	Fntb	intron	ENSMUSG00000033373	ProperStrand	176	1	-5.6692
chr10	79606892	79606908	protein_coding	Atp5d	intron	ENSMUSG00000003072	ProperStrand	44	chr2	26493425	26493499	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-4.3276
chr2	90235296	90235340	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	4707497	4707597	protein_coding	Peg10	utr3	ENSMUSG00000092035	ProperStrand	102	1	-3.4684
chr19	18790458	18790558	protein_coding	D030056L22Rik	intron	ENSMUSG00000047044	ProperStrand	5	chr4	131865966	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-6.5022
chr14	34781098	34781188	protein_coding	Zfp488	utr3	ENSMUSG00000044519	NonProperStrand	39	chr4	20171009	20171100	protein_coding	Nkain3	utr3	ENSMUSG00000055761	ProperStrand	34	1	-15.3041
chr17	51879667	51881989	protein_coding	Satb1	exon	ENSMUSG00000023927	ProperStrand	62	chr11	98878350	98878430	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-6.2199
chr1	194571766	194571833	snRNA	ENSMUSG00000064881_U5	.	ENSMUSG00000064881	ProperStrand	187	chr11	6428143	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.3342
chr2	26767603	26768546	protein_coding	Rpl7a	exon	ENSMUSG00000062647	ProperStrand	234	chr16	23111443	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-0.9357
chr2	171428709	171428799	Other	RMER1B	Other	chr2RMER1B171428728	ProperStrand	1	chr2	171428508	171428598	Other	RMER1C	Other	chr2RMER1C171428088	NonProperStrand	1	1	-inf
chr5	100802413	100802513	protein_coding	Sec31a	exon	ENSMUSG00000035325	ProperStrand	61	chr2	26768368	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-5.5692
chr2	165904622	165904638	protein_coding	Sulf2	exon	ENSMUSG00000006800	ProperStrand	171	chr7	118219704	118219743	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-2.2902
chr16	6881944	6881960	protein_coding	Rbfox1	intron	ENSMUSG00000008658	ProperStrand	29	chr18	36754580	36754596	protein_coding	Ankhd1	utr5	ENSMUSG00000024483	NonProperStrand	11	1	-18.1094
chr15	10504979	10504995	protein_coding	Rai14	exon	ENSMUSG00000022246	ProperStrand	180	chrX	71196009	71196590	protein_coding	Hcfc1	exon	ENSMUSG00000031386	ProperStrand	424	1	-7.2063
chrX	98613919	98613950	protein_coding	Zmym3	exon	ENSMUSG00000031310	ProperStrand	17	chr19	8800097	8800140	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-10.1587
chr8	48949986	48953539	protein_coding	Wwc2	exon	ENSMUSG00000031563	ProperStrand	37	chr17	13112450	13112530	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-5.5188
chr12	77471474	77471491	protein_coding	Zbtb1	utr5	ENSMUSG00000033454	NonProperStrand	1	chr9	15119631	15119674	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-inf
chr18	42362132	42362162	protein_coding	Lars	utr3	ENSMUSG00000024493	ProperStrand	69	chr1	193135394	193141810	protein_coding	Nenf	exon	ENSMUSG00000037499	ProperStrand	2	1	-inf
chr8	73033254	73033421	protein_coding	2810422J05Rik	exon	ENSMUSG00000055553	ProperStrand	171	chr12	17703599	17703703	protein_coding	Hpcal1	intron	ENSMUSG00000071379	ProperStrand	51	1	-11.5397
chr4	102679269	102679286	antisense	BB031773	.	ENSMUSG00000085041	NonProperStrand	1	chr8	73419729	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-inf
chr16	38285516	38285606	protein_coding	Nr1i2	intron	ENSMUSG00000022809	NonProperStrand	1	chr9	103995846	103995926	protein_coding	Ccrl1	intron	ENSMUSG00000041748	ProperStrand	1	1	-inf
chr16	33430319	33430340	protein_coding	Zfp148	intron	ENSMUSG00000022811	NonProperStrand	15	chr3	34550060	34550126	protein_coding	Sox2	exon	ENSMUSG00000074637	ProperStrand	299	1	-12.9141
chr13	30338190	30338207	protein_coding	Mboat1	utr3	ENSMUSG00000038732	NonProperStrand	148	chr1	88247802	88247835	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-3.3925
chr17	36097663	36097764	protein_coding	Abcf1	exon	ENSMUSG00000038762	ProperStrand	206	chr4	135607094	135607130	protein_coding	Rpl11	exon	ENSMUSG00000059291	ProperStrand	152	1	-8.9765
chr1	45488603	45488620	protein_coding	Col5a2	intron	ENSMUSG00000026042	ProperStrand	184	chr2	32818883	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	2	-5.7103
chr4	59766120	59766139	protein_coding	E130308A19Rik	utr3	ENSMUSG00000045071	ProperStrand	41	chr16	23110855	23110999	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-5.0733
chr16	33013371	33013446	protein_coding	Lrch3	utr3	ENSMUSG00000022801	ProperStrand	9	chr7	116664792	116664840	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-10.2063
chr10	58901362	58901379	protein_coding	Oit3	exon	ENSMUSG00000009654	NonProperStrand	11	chrX	83547356	83547372	protein_coding	Mageb4	intron	ENSMUSG00000035427	NonProperStrand	191	1	-14.4588
chr9	21808979	21809021	protein_coding	Prkcsh	exon	ENSMUSG00000003402	ProperStrand	58	chr10	110918597	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-5.9784
chrX	70237450	70237472	miRNA	Mir2137	.	ENSMUSG00000089357	ProperStrand	50	chrX	159218739	159218756	protein_coding	Txlng	utr3	ENSMUSG00000038344	ProperStrand	45	1	-14.2609
chr10	58909954	58910012	protein_coding	Ccdc109a	utr3	ENSMUSG00000009647	ProperStrand	6	chr1	162966000	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-8.2222
chr11	75475046	75475265	protein_coding	Myo1c	exon	ENSMUSG00000017774	ProperStrand	38	chr17	35087895	35087946	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-6.0969
chr13	3575758	3575775	protein_coding	BC016423	exon	ENSMUSG00000033799	NonProperStrand	4	chr4	131908363	131908439	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-11.0940
chr8	112065767	112066296	protein_coding	Pmfbp1	exon	ENSMUSG00000031727	NonProperStrand	17	chr2	158182180	158182241	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-7.5108
chr5	92482943	92483033	protein_coding	G3bp2	utr3	ENSMUSG00000029405	ProperStrand	78	chr7	116664794	116664874	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.1086
chr1	162133679	162133742	protein_coding	Cacybp	utr3	ENSMUSG00000014226	ProperStrand	39	chr15	82725599	82725636	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	1	-9.3883
chr5	34087808	34087824	protein_coding	Letm1	exon	ENSMUSG00000005299	ProperStrand	21	chr17	24665420	24665474	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-7.0183
chr9	58373359	58373439	protein_coding	Cd276	utr3	ENSMUSG00000035914	ProperStrand	19	chr11	69483136	69483226	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.5692
chr9	88351357	88351374	protein_coding	Syncrip	exon	ENSMUSG00000032423	ProperStrand	35	chr17	27236036	27236052	protein_coding	Itpr3	exon	ENSMUSG00000042644	ProperStrand	137	1	-12.7455
chr8	74766424	74766442	protein_coding	Ap1m1	intron	ENSMUSG00000003033	ProperStrand	4	chr17	23947734	23948650	protein_coding	Srrm2	utr5	ENSMUSG00000039218	ProperStrand	521	1	-14.6663
chr5	36814985	36815044	protein_coding	Grpel1	utr3	ENSMUSG00000029198	ProperStrand	20	chr2	70927900	70927917	protein_coding	Dcaf17	exon	ENSMUSG00000041966	NonProperStrand	89	1	-14.7590
chr1	31260593	31260609	protein_coding	Lgsn	exon	ENSMUSG00000050217	ProperStrand	20	chr19	8963027	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.2716
chr13	99660648	99660720	protein_coding	Tnpo1	exon	ENSMUSG00000009470	ProperStrand	56	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-7.8653
chr4	138746710	138746790	SINE	B1F2	Alu	chr4B1F2138746704	ProperStrand	1	chr4	138746482	138746572	SINE	B2_Mm2	B2	chr4B2_Mm2138746482	ProperStrand	1	1	-inf
chr8	111445233	111445250	protein_coding	Zfhx3	intron	ENSMUSG00000038872	ProperStrand	65	chr7	67123693	67123753	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	1	-9.3780
chr3	100743255	100743355	protein_coding	Ttf2	utr3	ENSMUSG00000033222	ProperStrand	50	chr4	131908810	131908871	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.4812
chr11	4820972	4820990	protein_coding	Thoc5	intron	ENSMUSG00000034274	ProperStrand	325	chr7	52381540	52381600	protein_coding	Rpl13a	exon	ENSMUSG00000074129	ProperStrand	269	1	-6.9372
chr11	80056141	80056919	protein_coding	Rhot1	exon	ENSMUSG00000017686	ProperStrand	40	chr1	162968214	162968294	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-7.6254
chr17	32458052	32458075	protein_coding	Akap8	utr5	ENSMUSG00000024045	ProperStrand	339	chr7	88222667	88222767	protein_coding	Alpk3	exon	ENSMUSG00000038763	ProperStrand	17	1	-12.4056
chr7	13516125	13516172	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr8	98269959	98270013	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-1.4207
chr18	35063348	35063391	protein_coding	Etf1	utr3	ENSMUSG00000024360	ProperStrand	74	chr8	74022294	74030741	protein_coding	Plvap	utr3	ENSMUSG00000034845	ProperStrand	27	1	-14.5078
chr9	106761301	106761362	protein_coding	Vprbp	exon	ENSMUSG00000040325	ProperStrand	35	chr5	130300468	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	9	-inf
chr11	117729369	117729386	protein_coding	Tha1	utr3	ENSMUSG00000017713	NonProperStrand	56	chr6	115757997	115758132	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-5.6070
chr19	38599575	38599593	protein_coding	Plce1	exon	ENSMUSG00000024998	ProperStrand	20	chr17	24808676	24808714	protein_coding	Zfp598	intron	ENSMUSG00000041130	ProperStrand	26	1	-17.1238
chr12	53619858	53619948	protein_coding	Arhgap5	exon	ENSMUSG00000035133	ProperStrand	16	chr7	117166761	117166851	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	7	-21.4657
chr18	34787779	34787803	protein_coding	Kif20a	exon	ENSMUSG00000003779	ProperStrand	50	chr18	35716785	35716875	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.4759
chr2	130101959	130102039	protein_coding	Nop56	intron	ENSMUSG00000027405	ProperStrand	125	chr2	130101993	130102083	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	2	-6.6404
chr14	80262508	80262524	lincRNA	Gm6999	intron	ENSMUSG00000075495	ProperStrand	265	chr11	101466240	101466349	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	1	-5.9264
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr10	60806914	60809550	protein_coding	X99384	exon	ENSMUSG00000020092	ProperStrand	60	1	-8.6056
chr13	63426284	63426300	protein_coding-noncoding	Fancc	utr3	ENSMUSG00000021461	ProperStrand	4	chr9	51893339	51893386	protein_coding	Rdx	exon	ENSMUSG00000032050	ProperStrand	60	1	-19.5074
chr17	39985181	39985646	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr1	39605590	39605681	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	3	-2.7352
chr7	134358091	134358181	protein_coding	Sept1	utr3	ENSMUSG00000000486	ProperStrand	7	chr4	122970408	122970488	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-11.8284
chr4	140311281	140311299	protein_coding	Padi4	intron	ENSMUSG00000025330	NonProperStrand	3	chr1	120572202	120574085	protein_coding	Tfcp2l1	utr3	ENSMUSG00000026380	ProperStrand	158	1	-17.7905
chr10	80644729	80644806	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr10	106266059	106266075	protein_coding	Ppfia2	exon	ENSMUSG00000053825	ProperStrand	20	1	-8.3001
chr11	69870769	69870785	protein_coding	Asgr1	exon	ENSMUSG00000020884	NonProperStrand	145	chr7	29136525	29136570	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.0404
chr9	70960076	70960093	protein_coding	Aqp9	exon	ENSMUSG00000032204	NonProperStrand	118	chr15	79908960	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-4.1723
chr12	60141407	60141493	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	chr5	115940316	115940406	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	2	-4.4139
chr4	43016145	43016213	protein_coding	Fancg	exon	ENSMUSG00000028453	ProperStrand	13	chr15	34370545	34370576	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-6.5354
chr16	17295552	17297018	protein_coding	Pi4ka	exon	ENSMUSG00000041720	ProperStrand	39	chr11	55296297	55296336	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	2	-11.3339
chr17	29105664	29105723	protein_coding	Kctd20	utr3	ENSMUSG00000005936	ProperStrand	21	chr11	103248392	103248449	protein_coding	Plekhm1	exon	ENSMUSG00000034247	ProperStrand	23	1	-17.1575
chr19	37392571	37399720	protein_coding	Ide	exon	ENSMUSG00000056999	ProperStrand	19	chr19	8799847	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	6	-20.4080
chr2	26493434	26493514	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr15	89199862	89200112	protein_coding	Ncaph2	exon	ENSMUSG00000008690	ProperStrand	65	6	-20.1841
chr11	114568997	114569779	protein_coding	Ttyh2	exon	ENSMUSG00000034714	ProperStrand	23	chr4	131908688	131908718	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.7500
chr7	28534382	28534435	protein_coding	Zfp60	exon	ENSMUSG00000037640	ProperStrand	14	chr11	6428035	6428088	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.9988
chr9	120483336	120483436	protein_coding	Rpl14	exon	ENSMUSG00000025794	ProperStrand	123	chr10	39978448	39978484	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-4.0815
chr2	90620078	90620109	protein_coding	Fnbp4	utr3	ENSMUSG00000008200	ProperStrand	45	chr6	91634086	91634154	protein_coding	Slc6a6	utr5	ENSMUSG00000030096	ProperStrand	206	2	-18.0591
chrX	96245892	96245908	protein_coding	Stard8	intron	ENSMUSG00000031216	ProperStrand	142	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-5.5060
chr17	35378939	35379039	protein_coding	Ddx39b	utr5	ENSMUSG00000019432	ProperStrand	119	chr4	41150098	41150129	snoRNA	ENSMUSG00000089265_SNORD121A	.	ENSMUSG00000089265	ProperStrand	370	1	-8.2986
chr2	168574968	168575015	protein_coding	Sall4	utr3	ENSMUSG00000027547	ProperStrand	82	chr11	69483189	69483279	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.9346
chr11	69486663	69486762	protein_coding	Senp3	utr3	ENSMUSG00000005204	ProperStrand	65	chr5	130300524	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-4.2113
chr2	90235299	90235345	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	47970971	47970987	protein_coding	Itprip	utr3	ENSMUSG00000079254	ProperStrand	75	1	-4.0395
chr16	18392705	18392795	protein_coding	Arvcf	utr5	ENSMUSG00000000325	ProperStrand	28	chr16	23110469	23110549	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.8373
chr5	30438945	30442911	protein_coding	Fam59b	intron	ENSMUSG00000044576	NonProperStrand	20	chr8	32260335	32260424	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	3	-15.5734
chr2	90575654	90575697	protein_coding	Nup160	utr3	ENSMUSG00000051329	ProperStrand	49	chr6	142211245	142214830	protein_coding	Slco1a5	exon	ENSMUSG00000063975	NonProperStrand	38	1	-14.6553
chr2	128438131	128438165	protein_coding	Anapc1	utr3	ENSMUSG00000014355	ProperStrand	38	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.1259
chr18	80631985	80632075	protein_coding	Ctdp1	intron	ENSMUSG00000033323	ProperStrand	69	chr12	76769560	76769640	protein_coding	Wdr89	intron	ENSMUSG00000045690	ProperStrand	7	1	-17.5140
chr6	148303273	148303373	protein_coding	Rps4y2	exon	ENSMUSG00000063171	ProperStrand	47	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.7863
chr6	83725770	83725787	protein_coding	Tex261	utr5	ENSMUSG00000014748	NonProperStrand	3	chr9	78327920	78328065	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-12.6763
chr6	83725718	83725734	protein_coding	Tex261	utr5	ENSMUSG00000014748	NonProperStrand	3	chr1	135147552	135147568	protein_coding	Plekha6	intron	ENSMUSG00000041757	NonProperStrand	40	1	-20.6314
chr2	37270045	37270082	protein_coding	Rc3h2	exon	ENSMUSG00000075376	ProperStrand	35	chr4	131908236	131908341	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-6.1465
chr12	88289017	88289034	protein_coding	2310044G17Rik	intron	ENSMUSG00000034157	ProperStrand	48	chr6	71832629	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-6.0498
chr4	63031684	63032006	protein_coding	Akna	exon	ENSMUSG00000039158	ProperStrand	8	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-7.2483
chr4	47325676	47325693	protein_coding	Col15a1	utr3	ENSMUSG00000028339	NonProperStrand	2	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-10.5602
chr1	89046837	89046860	protein_coding	Ecel1	intron	ENSMUSG00000026247	ProperStrand	4	chr15	72927887	72927938	protein_coding	Chrac1	utr3	ENSMUSG00000068391	NonProperStrand	26	2	-19.3730
chr4	149615201	149616282	protein_coding	Eno1	exon	ENSMUSG00000063524	ProperStrand	432	chr7	116663689	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-0.8183
chr4	49379872	49379962	LINE	L1Md_F2	L1	chr4L1Md_F249379075	ProperStrand	1	chr4	49380055	49380145	LTR	MMETn-int	ERVK	chr4MMETn-int49380073	ProperStrand	1	1	-inf
chr1	91662884	91662984	protein_coding	Agap1	exon	ENSMUSG00000055013	ProperStrand	229	chr11	97642951	97643004	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	4	-3.2458
chr8	73882926	73882942	protein_coding	Myo9b	exon	ENSMUSG00000004677	ProperStrand	78	chr2	130462949	130462980	protein_coding	Prosapip1	exon	ENSMUSG00000037703	ProperStrand	11	1	-16.2200
chr1	74470436	74470453	protein_coding	Vil1	exon	ENSMUSG00000026175	ProperStrand	68	chr6	81992905	81992921	protein_coding	Fam176a	intron	ENSMUSG00000035104	ProperStrand	64	1	-12.9323
chr4	62047188	62048918	protein_coding	Slc31a1	exon	ENSMUSG00000066150	ProperStrand	45	chr7	29136525	29136610	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.8631
chr2	26494740	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	chr1	161270415	161270463	snoRNA	ENSMUSG00000089536_Scarna3a	.	ENSMUSG00000089536	ProperStrand	247	3	-2.9722
chr11	62366391	62366447	protein_coding	Ubb	exon	ENSMUSG00000019505	ProperStrand	32	chr18	33954865	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-7.8069
chr9	95361872	95363131	protein_coding	2610101N10Rik	exon	ENSMUSG00000032407	ProperStrand	56	chr19	8798752	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-4.9343
chr9	30897592	30898056	protein_coding	St14	exon	ENSMUSG00000031995	ProperStrand	90	chr7	116663634	116663714	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.8450
chr2	94368859	94368949	LINE	L1_Mus4	L1	chr2L1_Mus494368882	ProperStrand	1	chr2	127690815	127690895	protein_coding	Acoxl	intron	ENSMUSG00000027380	ProperStrand	8	1	-inf
chr2	90235312	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr12	82317769	82317785	protein_coding	Slc8a3	exon	ENSMUSG00000079055	ProperStrand	126	1	-3.0859
chr7	6088586	6088676	protein_coding	Zfp787	intron	ENSMUSG00000046792	ProperStrand	16	chr9	15119646	15119727	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	5	-inf
chr3	89810451	89810488	protein_coding	Ubap2l	utr3	ENSMUSG00000042520	ProperStrand	88	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-6.6287
chr5	116360474	116360493	protein_coding	Cit	intron	ENSMUSG00000029516	ProperStrand	45	chr4	131908299	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.8531
chr14	51460950	51460966	protein_coding	Tep1	exon	ENSMUSG00000006281	ProperStrand	37	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-12.6621
chr2	32813951	32814041	protein_coding	Lrsam1	intron	ENSMUSG00000026792	ProperStrand	80	chr4	131865856	131865936	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.3420
chr11	117848249	117848314	protein_coding	Pgs1	exon	ENSMUSG00000017715	ProperStrand	25	chr17	28111887	28111904	protein_coding	Anks1	exon	ENSMUSG00000024219	NonProperStrand	16	1	-17.6396
chr9	95525008	95525035	antisense	Gm16126	.	ENSMUSG00000086585	NonProperStrand	229	chr8	73419661	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	5	-6.2831
chr9	45198928	45199653	protein_coding	Fxyd6	exon	ENSMUSG00000066705	NonProperStrand	108	chr17	24856708	24856753	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-5.2750
chr11	40564147	40564272	protein_coding	Ccng1	utr3	ENSMUSG00000020326	NonProperStrand	1	chr19	8799049	8799087	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	NonProperStrand	4	1	-inf
chr1	182836102	182836128	protein_coding	Pycr2	exon	ENSMUSG00000026520	ProperStrand	89	chr16	23111736	23111826	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.3138
chr17	79026105	79026121	protein_coding	Vit	exon	ENSMUSG00000024076	NonProperStrand	3	chr10	23505152	23505268	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-6.9610
chr16	89770564	89770654	LINE	L1MA9	L1	chr16L1MA989770151	ProperStrand	1	chr16	89770668	89770748	LTR	MTC	MaLR	chr16MTC89770667	NonProperStrand	1	1	-inf
chr2	29888851	29888868	protein_coding	Wdr34	exon	ENSMUSG00000039715	ProperStrand	5	chr15	79913327	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-8.6129
chr1	40548304	40548320	protein_coding	Il18r1	utr3	ENSMUSG00000026070	NonProperStrand	4	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-11.7931
chr15	82980101	82980191	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr9	64023229	64023309	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	9	-20.7947
chr1	93252080	93252096	protein_coding	Klhl30	exon	ENSMUSG00000026308	ProperStrand	27	chr5	121655099	121655129	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.2800
chr18	90764558	90764632	LINE	L1MB3	L1	chr18L1MB390764530	ProperStrand	2	chr8	73419675	73419765	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-inf
chr3	94766530	94766610	LTR	BGLII	ERVK	chr3BGLII94766546	NonProperStrand	1	chr3	94766723	94766813	LTR	BGLII_Mus	ERVK	chr3BGLII_Mus94766642	NonProperStrand	1	1	-inf
chr2	90235304	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	134591531	134591548	protein_coding	Loh12cr1	intron	ENSMUSG00000042992	ProperStrand	16	1	-7.0757
chr13	58229346	58229372	protein_coding	Hnrnpa0	exon	ENSMUSG00000007836	ProperStrand	110	chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	2	-11.8349
chr14	20616430	20616479	protein_coding	Nid2	exon	ENSMUSG00000021806	ProperStrand	372	chr19	56006041	56006057	protein_coding	Tcf7l2	utr3	ENSMUSG00000024985	NonProperStrand	22	1	-11.6899
chr16	91729701	91729723	protein_coding	Itsn1	utr5	ENSMUSG00000022957	ProperStrand	172	chr2	14526894	14526911	protein_coding	Cacnb2	intron	ENSMUSG00000057914	NonProperStrand	11	1	-14.6602
chr1	93295185	93295237	protein_coding	Ilkap	utr5	ENSMUSG00000026309	NonProperStrand	1	chr4	154984665	154984681	protein_coding	Slc35e2	exon	ENSMUSG00000042202	ProperStrand	6	1	-inf
chr8	122429887	122429903	SINE	B1_Mur4	Alu	chr8B1_Mur4122429833	NonProperStrand	12	chr9	122075466	122075482	protein_coding	Snrk	exon	ENSMUSG00000038145	NonProperStrand	97	1	-15.6553
chr18	73693116	73693149	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr10	90581034	90581167	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	12	-3.8619
chr7	31758166	31758200	protein_coding	Lsr	utr5	ENSMUSG00000001247	ProperStrand	8	chr19	60845909	60847004	protein_coding	Eif3a	exon	ENSMUSG00000024991	ProperStrand	287	1	-14.3116
chr7	117166721	117166860	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	chr18	33954815	33954953	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	30	-4.6280
chr13	9833554	9833675	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr10	127521214	127521272	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	2	-2.1311
chr9	30235085	30235102	protein_coding	Snx19	exon	ENSMUSG00000031993	ProperStrand	353	chr7	117189863	117189922	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	2	-4.9534
chr4	104873948	104874022	protein_coding	Ppap2b	intron	ENSMUSG00000028517	ProperStrand	8	chr2	32818884	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-9.5623
chr8	47932132	47932149	protein_coding	Irf2	utr3	ENSMUSG00000031627	NonProperStrand	33	chr2	32818864	32818928	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-6.6519
chr17	24301169	24301259	protein_coding	Atp6v0c	utr3	ENSMUSG00000024121	ProperStrand	75	chr16	90386834	90386853	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	1	-11.7606
chr1	162967124	162967178	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	chr7	116664793	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	12	-6.8377
chr12	86102530	86102610	protein_coding	Npc2	intron	ENSMUSG00000021242	ProperStrand	29	chr5	77377425	77377515	protein_coding	Ppat	intron	ENSMUSG00000029246	ProperStrand	55	1	-14.9501
chr1	79791495	79791543	protein_coding	Serpine2	utr3	ENSMUSG00000026249	ProperStrand	11	chr4	151767924	151768399	protein_coding	Kcnab2	exon	ENSMUSG00000028931	ProperStrand	22	1	-19.1540
chr17	37146479	37146569	protein_coding	Zfp57	exon	ENSMUSG00000036036	ProperStrand	39	chr5	74489564	74489644	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-4.5953
chr9	30235085	30235101	protein_coding	Snx19	exon	ENSMUSG00000031993	ProperStrand	353	chr3	153326129	153326236	protein_coding	St6galnac3	intron	ENSMUSG00000052544	ProperStrand	19	1	-12.0954
chr7	148072437	148072724	protein_coding	Psmd13	exon	ENSMUSG00000025487	ProperStrand	16	chr7	116664841	116664922	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-5.0191
chr13	76155735	76155797	protein_coding	Rfesd	utr5	ENSMUSG00000043190	ProperStrand	30	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-9.1207
chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	NonProperStrand	91	chr17	62806335	62806365	snoRNA	ENSMUSG00000064570_SNORA9	.	ENSMUSG00000064570	NonProperStrand	1	1	-inf
chr7	59872730	59872755	SINE	B1_Mus1	Alu	chr7B1_Mus159872679	ProperStrand	1	chr7	116664872	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-inf
chr7	88223593	88223643	protein_coding	Alpk3	exon	ENSMUSG00000038763	ProperStrand	17	chr7	116663710	116663768	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.8573
chr15	100416584	100416600	protein_coding	Pou6f1	intron	ENSMUSG00000009739	ProperStrand	44	chr11	6428089	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.7630
chr5	123622050	123622066	protein_coding	Hpd	exon	ENSMUSG00000029445	ProperStrand	254	chr9	50816824	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	1	-8.9176
chr18	81041314	81041330	protein_coding	Atp9b	exon	ENSMUSG00000024566	NonProperStrand	3	chr16	23111755	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-7.8619
chr7	66053268	66058847	protein_coding	Atp10a	exon	ENSMUSG00000025324	ProperStrand	37	chr1	195160763	195160824	protein_coding	Lamb3	exon	ENSMUSG00000026639	ProperStrand	4	1	-18.9976
chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	chr11	62416600	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-2.0484
chr19	7359208	7359224	protein_coding	Mark2	exon	ENSMUSG00000024969	ProperStrand	75	chr15	78939631	78939647	protein_coding	Micall1	utr5	ENSMUSG00000033039	ProperStrand	48	1	-13.3137
chr7	29959541	29959568	protein_coding	Psmd8	utr3	ENSMUSG00000030591	ProperStrand	23	chr18	66340804	66340826	protein_coding	Ccbe1	intron	ENSMUSG00000046318	NonProperStrand	11	1	-18.6114
chr9	59516875	59518342	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr9	15118563	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	1	-3.3616
chr7	101930260	101930277	SINE	B3A	B2	chr7B3A101930222	ProperStrand	3	chr7	116664841	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-8.6415
chr19	5797227	5797323	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr4	40936858	40936903	protein_coding	Nfx1	intron	ENSMUSG00000028423	ProperStrand	39	1	-8.4075
chr2	158184099	158184189	snoRNA	ENSMUSG00000064995_SNORA71	.	ENSMUSG00000064995	ProperStrand	430	chr5	108336378	108336458	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-1.4361
chr7	19479190	19479291	protein_coding	Ccdc61	exon	ENSMUSG00000074358	ProperStrand	27	chr2	158185603	158185654	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-8.0832
chr3	108228259	108228275	protein_coding	Sars	utr3	ENSMUSG00000068739	NonProperStrand	200	chr2	26494708	26494760	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.1776
chr4	140121138	140121154	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	chr5	108334204	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-3.2848
chr9	120038295	120038333	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	chr17	35299528	35299628	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	2	-2.7521
chr19	10663994	10664069	protein_coding	Cybasc3	utr3	ENSMUSG00000034445	ProperStrand	11	chr9	15119733	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-9.6817
chr16	91929200	91929220	protein_coding	Atp5o	exon	ENSMUSG00000022956	ProperStrand	37	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.6429
chr2	152656290	152656306	protein_coding	Bcl2l1	utr5	ENSMUSG00000007659	NonProperStrand	29	chr17	39985541	39985563	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-7.3787
chr18	35342103	35342193	protein_coding	Ctnna1	exon	ENSMUSG00000037815	ProperStrand	115	chr5	108334198	108334278	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-3.5911
chr4	108297069	108297149	protein_coding	Cc2d1b	exon	ENSMUSG00000028582	ProperStrand	13	chr7	134911453	134911543	protein_coding	Fbxl19	utr3	ENSMUSG00000030811	ProperStrand	15	1	-20.0385
chr6	148870338	148870391	protein_coding	Fam60a	utr3	ENSMUSG00000039985	ProperStrand	68	chr10	79354782	79354798	protein_coding	Cfd	exon	ENSMUSG00000061780	ProperStrand	18	1	-15.4775
chr5	120889875	120889892	protein_coding	Lhx5	intron	ENSMUSG00000029595	NonProperStrand	106	chr19	8798741	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-3.7236
chr11	106858554	106858586	protein_coding	Kpna2	exon	ENSMUSG00000018362	ProperStrand	70	chr4	131908810	131908857	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-2.0219
mmu-miR-703	1	17	miRNA	mmu-miR-703	.	mmu-miR-703	ProperStrand	1	chr11	62416578	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-inf
chr8	14671912	14671928	protein_coding	Dlgap2	intron	ENSMUSG00000047495	ProperStrand	20	chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-10.0801
chr9	15119322	15119425	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	chr4	116827119	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	2	-0.6970
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr16	91729698	91793863	protein_coding	Itsn1	utr5	ENSMUSG00000022957	ProperStrand	172	2	-4.4611
chr16	8689098	8689114	protein_coding	Usp7	utr3	ENSMUSG00000022710	NonProperStrand	11	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-6.9371
chr1	192777775	192777792	protein_coding	Vash2	intron	ENSMUSG00000037568	ProperStrand	34	chr16	17016130	17016160	protein_coding	Mapk1	exon	ENSMUSG00000063358	ProperStrand	67	1	-14.2297
chr5	15752544	15770077	protein_coding	Cacna2d1	exon	ENSMUSG00000040118	ProperStrand	12	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-4.4633
chr18	10052128	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr8	72767313	72767367	protein_coding	Sugp2	exon	ENSMUSG00000036054	ProperStrand	33	1	-10.0052
chr3	51865238	51865256	protein_coding	Maml3	intron	ENSMUSG00000061143	NonProperStrand	12	chr10	23506279	23506348	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	2	-16.2003
chr1	20922259	20922275	protein_coding	Paqr8	utr5	ENSMUSG00000025931	NonProperStrand	60	chr1	52701063	52701163	protein_coding	Tmem194b	intron	ENSMUSG00000043015	ProperStrand	4	1	-19.2310
chr1	195174370	195174386	protein_coding	Camk1g	exon	ENSMUSG00000016179	ProperStrand	3	chr4	131865413	131865503	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-10.2531
chr8	72859628	72859654	protein_coding	Upf1	exon	ENSMUSG00000058301	ProperStrand	90	chr19	8799581	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	3	-13.7351
chr15	45130790	45130809	LINE	L1_Mus2	L1	chr15L1_Mus245129537	NonProperStrand	17	chr17	27096746	27096762	protein_coding	Syngap1	exon	ENSMUSG00000067629	NonProperStrand	2	1	-inf
chr14	21565625	21565719	protein_coding	Camk2g	intron	ENSMUSG00000021820	ProperStrand	24	chr5	14252800	14252816	protein_coding	Sema3e	utr3	ENSMUSG00000063531	ProperStrand	125	1	-13.6927
chr2	179322381	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr1	167106405	167106495	protein_coding	Sft2d2	utr3	ENSMUSG00000040848	ProperStrand	25	1	-12.9823
chr19	24019181	24019225	protein_coding	Apba1	intron	ENSMUSG00000024897	NonProperStrand	12	chr4	131908689	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-6.7788
chr3	88149289	88149331	protein_coding	Smg5	exon	ENSMUSG00000001415	ProperStrand	70	chr4	131908236	131908276	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-2.3280
chr2	90235294	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	86614439	86614455	protein_coding	Gnrhr	exon	ENSMUSG00000029255	NonProperStrand	13	1	-7.5011
chr2	131745211	131745253	protein_coding	Prnd	intron	ENSMUSG00000027338	NonProperStrand	12	chr7	67123696	67123731	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	1	-12.8216
chr6	122657763	122657811	protein_coding	Nanog	utr5	ENSMUSG00000012396	ProperStrand	66	chr11	62416602	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	3	-11.7517
chr7	117189863	117189943	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr12	110918157	110918221	snoRNA	ENSMUSG00000065749_AF357428	.	ENSMUSG00000065749	ProperStrand	218	1	-3.7300
chr4	107559875	107559975	protein_coding	Magoh	utr3	ENSMUSG00000028609	ProperStrand	5	chr3	123210852	123210889	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-6.8746
chr1	71642241	71676353	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr11	69483136	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	9	-1.4551
chr11	72214871	72214978	protein_coding	Smtnl2	exon	ENSMUSG00000045667	ProperStrand	30	chr13	21292132	21292160	tRNA	tRNA65-LeuCAA	.	510140	ProperStrand	57	1	-14.8188
chr7	17590182	17590204	protein_coding	Ppp5c	utr3	ENSMUSG00000003099	ProperStrand	9	chr7	117189863	117189922	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-10.0675
chr16	48565753	48582540	protein_coding	Morc1	exon	ENSMUSG00000022652	ProperStrand	28	chr4	131865381	131865471	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-5.4736
chrX	70741061	70741080	protein_coding	Bgn	utr3	ENSMUSG00000031375	NonProperStrand	2	chrX	55284352	55284419	protein_coding	Zic3	utr5	ENSMUSG00000067860	ProperStrand	21	2	-inf
chr2	146900729	146903265	protein_coding	Xrn2	exon	ENSMUSG00000027433	ProperStrand	48	chr15	83058203	83058295	protein_coding	A4galt	exon	ENSMUSG00000047878	ProperStrand	21	7	-19.4419
chr16	24428353	24428369	protein_coding	Lpp	intron	ENSMUSG00000033306	ProperStrand	38	chr16	23110827	23110851	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.7634
chr9	21644084	21644110	protein_coding	Dock6	exon	ENSMUSG00000032198	ProperStrand	155	chr17	35299551	35299641	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-3.0102
chr7	112897560	112897745	protein_coding	Tpp1	exon	ENSMUSG00000030894	ProperStrand	3	chr4	131908686	131908751	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-6.9471
chr11	70757633	70757723	protein_coding	Nup88	exon	ENSMUSG00000040667	ProperStrand	17	chr16	23110911	23110991	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.8783
chr5	93611537	93611585	protein_coding	Ccni	utr3	ENSMUSG00000063015	ProperStrand	43	chr5	74489587	74489679	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-4.4078
chr4	131865380	131865470	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	chr16	23109027	23109072	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	5	-1.3857
chr2	130101250	130101330	protein_coding	Nop56	intron	ENSMUSG00000027405	ProperStrand	125	chr9	15119675	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.4533
chr7	52309977	52309993	protein_coding	Prrg2	exon	ENSMUSG00000007837	NonProperStrand	281	chr18	73693085	73693148	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	2	-4.6216
chr2	90235301	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chrX	158274965	158557383	protein_coding	Nhs	intron	ENSMUSG00000059493	NonProperStrand	50	2	-7.9686
chr5	137798844	137803726	protein_coding	Ephb4	exon	ENSMUSG00000029710	ProperStrand	49	chr4	131908689	131908808	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-8.3119
chr3	32481632	32481650	protein_coding	Gnb4	utr3	ENSMUSG00000027669	ProperStrand	10	chr7	51505284	51505308	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	1	-11.8101
chr11	57855112	57855145	protein_coding	Larp1	exon	ENSMUSG00000037331	ProperStrand	201	chr7	117166756	117166861	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	2	-4.5383
chr1	72207118	72207208	protein_coding	Mreg	utr3	ENSMUSG00000039395	ProperStrand	63	chr1	89673619	89673709	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-3.1750
chr11	119136228	119136244	protein_coding	Gaa	exon	ENSMUSG00000025579	NonProperStrand	201	chr14	76247711	76247768	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-2.0270
chr9	57385425	57385441	protein_coding	2310046O06Rik	utr5	ENSMUSG00000032305	ProperStrand	135	chr1	162968213	162968254	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-5.2250
chr4	155571392	155571482	protein_coding	Agrn	exon	ENSMUSG00000041936	ProperStrand	175	chr9	120038564	120038644	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	7	-11.4932
chr9	15130703	15131005	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	chr16	23110852	23111010	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	29	-4.5114
chr4	129662259	129662276	protein_coding	Bai2	utr5	ENSMUSG00000028782	ProperStrand	119	chr4	139041819	139041913	protein_coding	Ubr4	intron	ENSMUSG00000066036	ProperStrand	304	1	-8.6895
chr1	63103532	63103592	protein_coding	Ino80d	utr3	ENSMUSG00000040865	ProperStrand	70	chr7	29136587	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	5	-10.3332
chr9	64025807	64026102	protein_coding	Rpl4	exon	ENSMUSG00000032399	NonProperStrand	4	chr2	97142254	97142275	protein_coding	Lrrc4c	intron	ENSMUSG00000050587	NonProperStrand	16	2	-inf
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr3	96364565	96364665	protein_coding	Txnip	utr3	ENSMUSG00000038393	ProperStrand	172	1	-4.3260
chr9	61761701	61761747	protein_coding	Rplp1	exon	ENSMUSG00000007892	ProperStrand	116	chr1	162966834	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	2	-8.1924
chr5	117733359	117733459	protein_coding	Pebp1	exon	ENSMUSG00000032959	ProperStrand	54	chr2	32818877	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-5.6770
chr2	74707438	74707471	protein_coding	Mtx2	exon	ENSMUSG00000027099	ProperStrand	4	chr4	131908737	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-inf
chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	chr4	116826700	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-2.5523
chr18	10052133	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr11	116535923	116535982	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	1	-1.8041
chr14	119693352	119693368	protein_coding	Hs6st3	intron	ENSMUSG00000053465	NonProperStrand	134	chr15	79913303	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.1801
chr15	51800029	51801479	protein_coding	Rad21	exon	ENSMUSG00000022314	ProperStrand	85	chr4	116312463	116312553	protein_coding	Akr1a1	exon	ENSMUSG00000028692	ProperStrand	35	3	-20.4347
chr14	8973194	8973210	protein_coding	Pxk	exon	ENSMUSG00000033885	NonProperStrand	3	chr8	98269958	98270058	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-11.8636
chr8	129114701	129114803	protein_coding	Irf2bp2	utr3	ENSMUSG00000051495	ProperStrand	25	chr16	23110986	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.2939
chr9	120039326	120039426	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	chr19	8798504	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-1.8082
chr4	135846171	135846187	protein_coding	Zfp46	exon	ENSMUSG00000051351	NonProperStrand	85	chr9	113995381	113995431	protein_coding	Susd5	intron	ENSMUSG00000086596	ProperStrand	10	1	-16.2428
chr16	55969719	55970265	protein_coding	Rpl24	exon	ENSMUSG00000022601	ProperStrand	149	chr9	15118329	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-1.8988
chr1	187193542	187194770	protein_coding	Eprs	exon	ENSMUSG00000026615	ProperStrand	149	chr10	110918550	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	9	-19.5841
chr7	89920312	89920345	protein_coding	Eftud1	intron	ENSMUSG00000038563	NonProperStrand	3	chr11	77995187	77995239	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-12.5216
chr11	72204552	72204644	protein_coding	Smtnl2	utr3	ENSMUSG00000045667	ProperStrand	30	chr7	116663649	116663693	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.7620
chr14	45949538	45949554	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	chr9	15119968	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-3.9665
chr2	90235292	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	102092856	102092872	protein_coding	Nkx6-1	exon	ENSMUSG00000035187	NonProperStrand	10	1	-8.0457
chr4	43505907	43505935	protein_coding	Ccdc107	intron	ENSMUSG00000028461	NonProperStrand	4	chr16	23111391	23111500	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-inf
chr3	57450646	57450662	protein_coding	Commd2	exon	ENSMUSG00000036513	ProperStrand	23	chr19	5493890	5493944	protein_coding	Cfl1	utr3	ENSMUSG00000056201	ProperStrand	88	1	-14.4801
chr4	140121137	140121153	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	chr1	59573133	59573149	protein_coding	Gm973	utr5	ENSMUSG00000047361	ProperStrand	8	1	-15.7878
chr5	34112034	34112050	protein_coding	Letm1	exon	ENSMUSG00000005299	NonProperStrand	145	chr1	162967490	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-1.9486
chr7	19590197	19591428	protein_coding	Irf2bp1	exon	ENSMUSG00000044030	NonProperStrand	81	chr19	8963051	8963182	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	4	-7.0378
chr11	119144561	119144995	protein_coding	Gaa	exon	ENSMUSG00000025579	ProperStrand	149	chr14	76247752	76247832	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-2.5238
chr15	12802768	12802848	protein_coding	Drosha	intron	ENSMUSG00000022191	ProperStrand	163	chr19	8963027	8963117	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-0.8337
chr19	45076158	45076192	protein_coding	Sema4g	exon	ENSMUSG00000025207	ProperStrand	58	chr2	77083075	77083133	protein_coding	Sestd1	utr5	ENSMUSG00000042272	ProperStrand	11	1	-16.8528
chr15	84144025	84144075	protein_coding	Parvb	utr3	ENSMUSG00000022438	ProperStrand	127	chr19	8963027	8963087	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.1421
chr2	70342690	70342707	antisense	Gm16292	.	ENSMUSG00000086515	ProperStrand	11	chr18	35716832	35716873	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-5.3336
chr4	43505656	43505756	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	NonProperStrand	174	chr16	23110987	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	NonProperStrand	93	1	-10.2966
chr7	66009610	66009690	protein_coding	Atp10a	intron	ENSMUSG00000025324	ProperStrand	37	chr16	55868076	55868166	protein_coding	Fam55c	intron	ENSMUSG00000075033	NonProperStrand	5	1	-18.7295
chr9	72944325	72944349	protein_coding	Rab27a	utr3	ENSMUSG00000032202	ProperStrand	12	chr5	65780719	65780764	protein_coding	Rpl9	exon	ENSMUSG00000047215	ProperStrand	113	1	-15.3529
chr18	42049580	42049670	protein_coding	Prelid2	intron	ENSMUSG00000056671	ProperStrand	4	chr16	23110902	23110982	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.6489
chr2	38109147	38109164	protein_coding	Dennd1a	intron	ENSMUSG00000035392	NonProperStrand	128	chr5	121655021	121655111	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.3963
chr1	164634852	164634942	protein_coding	Prrc2c	exon	ENSMUSG00000040225	ProperStrand	413	chr7	148634702	148634782	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-0.8706
chr17	29236616	29236672	protein_coding	Cdkn1a	utr3	ENSMUSG00000023067	ProperStrand	25	chr7	29136587	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	8	-20.3353
chr2	170890648	170890665	SINE	RSINE1	B4	chr2RSINE1170890544	NonProperStrand	1	chr4	137867338	137867394	protein_coding	Ddost	exon	ENSMUSG00000028757	ProperStrand	49	1	-inf
chr17	33965475	33965517	protein_coding	Ndufa7	intron	ENSMUSG00000041881	ProperStrand	64	chr10	23505150	23505215	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.1465
chr4	43505782	43505872	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr8	109061076	109062921	protein_coding	Cdh3	exon	ENSMUSG00000061048	ProperStrand	62	1	-3.0116
chr2	90235302	90235329	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr12	82047652	82047703	protein_coding	Srsf5	exon	ENSMUSG00000021134	ProperStrand	68	4	-13.5784
chr15	74353159	74353249	protein_coding	Bai1	intron	ENSMUSG00000034730	ProperStrand	22	chr4	131865385	131865465	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-5.9525
chr8	23486622	23486712	protein_coding	Slc25a15	utr3	ENSMUSG00000031482	ProperStrand	13	chr4	122970468	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-10.5184
chr16	85010684	85010705	protein_coding	App	intron	ENSMUSG00000022892	NonProperStrand	101	chr9	40612879	40612921	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	1	-8.5009
chr4	132280216	132280232	protein_coding	Eya3	utr3	ENSMUSG00000028886	NonProperStrand	9	chr6	142987346	142987374	protein_coding	5730419I09Rik	exon	ENSMUSG00000030279	ProperStrand	81	1	-16.5754
chr18	75160711	75160776	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	chr14	76247753	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-0.8333
chr9	95525011	95525035	antisense	Gm16126	.	ENSMUSG00000086585	NonProperStrand	229	chr5	143666269	143666345	protein_coding	Actb	exon	ENSMUSG00000029580	ProperStrand	446	4	-19.0579
chr5	36211589	36211679	protein_coding-noncoding	Ablim2	utr5	ENSMUSG00000029095	ProperStrand	1	chr5	36211770	36211860	protein_coding	Ablim2	intron	ENSMUSG00000029095	ProperStrand	36	1	-inf
chr11	75473833	75474005	protein_coding	Myo1c	exon	ENSMUSG00000017774	ProperStrand	38	chr9	15119646	15119726	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.4482
chr2	181316563	181316579	protein_coding	Uckl1	exon	ENSMUSG00000089917	ProperStrand	142	chr12	17552947	17553008	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-3.4607
chr5	130295414	130295500	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	chr5	147646414	147646462	snoRNA	ENSMUSG00000077185_SNORD102	.	ENSMUSG00000077185	ProperStrand	142	1	-3.6118
chr2	127861830	127861848	protein_coding	Acoxl	intron	ENSMUSG00000027380	NonProperStrand	12	chr3	95980295	95980320	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-10.1216
chr11	30050007	30051572	protein_coding	Spnb2	exon	ENSMUSG00000020315	ProperStrand	103	chr5	108334195	108336491	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-3.7951
chr9	107932371	107932471	protein_coding	Ip6k1	intron	ENSMUSG00000032594	ProperStrand	61	chr7	52381972	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-6.6791
chrX	83437137	83437153	protein_coding	Nr0b1	utr5	ENSMUSG00000025056	ProperStrand	37	chr12	17552961	17553089	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	2	-9.8317
chr5	54389949	54389967	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	chr1	17087852	17087868	protein_coding	Jph1	utr5	ENSMUSG00000042686	ProperStrand	39	1	-11.6505
chr13	107697820	107697923	protein_coding	Ipo11	intron	ENSMUSG00000042590	ProperStrand	120	chr19	8800458	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-2.3067
chr3	34555723	34555763	non_coding	Sox2ot	.	ENSMUSG00000090828	ProperStrand	25	chr10	23505190	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.6150
chr14	51545303	51545320	protein_coding	Apex1	exon	ENSMUSG00000035960	ProperStrand	6	chr10	60692417	60692433	protein_coding	Adamts14	exon	ENSMUSG00000059901	NonProperStrand	127	2	-20.0608
chr4	155114965	155115065	protein_coding	Atad3a	utr3	ENSMUSG00000029036	ProperStrand	28	chr10	90432659	90432678	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	1	-12.1587
chr17	35822057	35822257	protein_coding	Ddr1	exon	ENSMUSG00000003534	ProperStrand	129	chr11	69483136	69483246	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.2610
chr6	139884541	139884557	protein_coding	Pik3c2g	exon	ENSMUSG00000030228	ProperStrand	14	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-14.6536
chr14	8720097	8720168	protein_coding	Flnb	exon	ENSMUSG00000025278	ProperStrand	124	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-5.5535
chr2	119072364	119073752	protein_coding	Spint1	exon	ENSMUSG00000027315	ProperStrand	17	chr4	131908689	131908797	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.3002
chr11	3577458	3580891	protein_coding	Morc2a	exon	ENSMUSG00000034543	ProperStrand	62	chr11	97642952	97643071	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	4	-8.8104
chr2	164621093	164621193	protein_coding	Acot8	intron	ENSMUSG00000017307	ProperStrand	9	chr16	23111453	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.5836
chr6	72651186	72651286	protein_coding	Tcf7l1	intron	ENSMUSG00000055799	ProperStrand	61	chr15	98350146	98350215	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-4.7287
chr4	119299647	119299688	protein_coding	Foxj3	utr3	ENSMUSG00000032998	ProperStrand	9	chr2	158182156	158182194	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-8.8292
chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-7.3614
chr5	138050336	138051644	protein_coding	Pcolce	exon	ENSMUSG00000029718	ProperStrand	63	chr10	39978340	39978430	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	2	-8.7978
chr9	106183979	106183996	protein_coding	Poc1a	intron	ENSMUSG00000023345	ProperStrand	27	chr7	13516163	13516205	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	1	-10.2774
chr1	75174658	75174675	protein_coding	Abcb6	exon	ENSMUSG00000026198	ProperStrand	9	chr13	103895241	103895257	protein_coding	Mast4	intron	ENSMUSG00000034751	ProperStrand	150	1	-15.3642
chr12	106002200	106002217	protein_coding	Clmn	utr3	ENSMUSG00000021097	ProperStrand	50	chr6	137683826	137683874	protein_coding	Strap	utr5	ENSMUSG00000030224	ProperStrand	27	1	-15.2947
chr8	125627250	125628970	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	chr14	76372316	76372396	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	1	-6.3123
chr1	133252344	133252403	protein_coding	Srgap2	intron	ENSMUSG00000026425	ProperStrand	299	chr2	152119846	152119862	protein_coding	Tbc1d20	intron	ENSMUSG00000027465	ProperStrand	27	1	-11.7086
chr6	122679817	122679846	protein_coding	Slc2a3	utr3	ENSMUSG00000003153	ProperStrand	682	chr14	119693352	119693368	protein_coding	Hs6st3	intron	ENSMUSG00000053465	NonProperStrand	134	1	-6.8519
chr9	45746180	45746248	protein_coding	Sidt2	utr3	ENSMUSG00000034908	ProperStrand	10	chr18	73693122	73693148	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-9.1448
chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	chr19	8798484	8798536	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-2.4671
chr11	83254018	83254035	protein_coding	1700020L24Rik	exon	ENSMUSG00000035085	NonProperStrand	88	chr17	13115723	13115783	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	2	-10.9169
chr3	116594965	116595044	protein_coding	Frrs1	intron	ENSMUSG00000033386	ProperStrand	27	chr9	63436165	63436181	protein_coding	Iqch	exon	ENSMUSG00000037801	ProperStrand	14	1	-18.0026
chr16	13533925	13533941	SINE	B4A	B4	chr16B4A13533757	ProperStrand	2	chr1	162967489	162967513	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-10.7784
chr2	157822752	157822823	protein_coding	Tti1	intron	ENSMUSG00000027650	ProperStrand	17	chr2	32817607	32818122	protein_coding	Rpl12	exon	ENSMUSG00000038900	ProperStrand	167	1	-13.8219
chr18	82662186	82662202	protein_coding	Mbp	intron	ENSMUSG00000041607	NonProperStrand	185	chr3	9251660	9251724	protein_coding	Zbtb10	exon	ENSMUSG00000069114	ProperStrand	43	1	-11.7263
chr1	162984092	162984192	protein_coding	Dars2	exon	ENSMUSG00000026709	ProperStrand	14	chr12	60141421	60141508	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-9.7729
chr6	93695428	93695445	protein_coding	Magi1	exon	ENSMUSG00000045095	ProperStrand	106	chr11	62418014	62418074	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-4.4578
chr11	20800180	20800199	SINE	ID_B1	B4	chr11ID_B120800049	NonProperStrand	1	chr17	13112529	13112575	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-inf
chr8	11427556	11427572	protein_coding	Col4a2	exon	ENSMUSG00000031503	ProperStrand	74	chr3	79223176	79223193	protein_coding	Gm17359	intron	ENSMUSG00000091685	NonProperStrand	50	1	-13.2594
chr11	62416575	62416599	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr3	96155086	96228025	tRNA	tRNA755-GlyCCC	.	495237	ProperStrand	8	4	-20.0540
chr2	57034546	57034579	lincRNA	4930555B11Rik	intron	ENSMUSG00000086396	ProperStrand	9	chr4	131908313	131908413	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.8019
chr11	48614367	48614434	snoRNA	ENSMUSG00000064500_SNORD95	.	ENSMUSG00000064500	ProperStrand	100	chr18	35716835	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-4.1157
chr7	53316303	53339073	protein_coding	Nomo1	exon	ENSMUSG00000030835	ProperStrand	85	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-4.6502
chr6	120751111	120753336	protein_coding	Atp6v1e1	exon	ENSMUSG00000019210	ProperStrand	22	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-8.6048
chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	chr7	52381561	52381582	protein_coding	Rpl13a	exon	ENSMUSG00000074129	ProperStrand	269	1	-6.4606
chr6	135318089	135318109	protein_coding	Emp1	intron	ENSMUSG00000030208	ProperStrand	13	chrX	34622982	34623037	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-6.1263
chr8	87620859	87620905	protein_coding	Man2b1	exon	ENSMUSG00000005142	ProperStrand	27	chr5	121655035	121655062	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.2800
chr10	62303001	62303091	protein_coding	Tet1	exon	ENSMUSG00000047146	ProperStrand	286	chr7	148634738	148634828	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-1.3447
chr1	182745764	182745781	antisense	Gm16067	.	ENSMUSG00000073485	ProperStrand	25	chr3	85944541	85944610	snoRNA	ENSMUSG00000064390_Rnu73b	.	ENSMUSG00000064390	ProperStrand	164	1	-13.0687
chr15	38230354	38230394	protein_coding	Klf10	utr5	ENSMUSG00000037465	ProperStrand	33	chr11	69483187	69483277	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.5168
chr18	36961632	36961662	misc_RNA	Vault	.	ENSMUSG00000065145	ProperStrand	177	chr8	98299232	98312575	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	1	-7.8282
chr3	108228259	108228275	protein_coding	Sars	utr3	ENSMUSG00000068739	NonProperStrand	200	chr11	69483212	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-0.7220
chr11	77678911	77679026	protein_coding	Myo18a	utr3	ENSMUSG00000000631	ProperStrand	124	chr7	116663740	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	4	-5.7698
chr8	77650138	77650155	protein_coding	Mcm5	exon	ENSMUSG00000005410	ProperStrand	199	chr11	6428076	6428157	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.2484
chr5	31093938	31093956	protein_coding	Dpysl5	exon	ENSMUSG00000029168	NonProperStrand	38	chr7	117189932	117189980	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.1847
chr8	61391767	61391783	protein_coding	BC030500	exon	ENSMUSG00000049946	NonProperStrand	12	chr17	24857717	24857807	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-5.3067
chr9	71563169	71563259	protein_coding	Cgnl1	exon	ENSMUSG00000032232	ProperStrand	46	chr15	34370588	34370668	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-6.8033
chr11	62216938	62236417	protein_coding	Ncor1	exon	ENSMUSG00000018501	ProperStrand	132	chr16	23111383	23111503	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	7	-6.0225
chr8	46855240	46855906	protein_coding	Sorbs2	exon	ENSMUSG00000031626	ProperStrand	50	chr3	123210929	123210985	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.3689
chr19	10058756	10058779	protein_coding	Fth1	exon	ENSMUSG00000024661	ProperStrand	75	chr8	74446729	74446745	protein_coding	Zfp617	intron	ENSMUSG00000066880	NonProperStrand	208	1	-10.3713
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr14	52829459	52829565	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	4	-2.8191
chr8	112666901	112666975	protein_coding	Calb2	utr3	ENSMUSG00000003657	ProperStrand	55	chrX	34622928	34623018	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-3.3291
chr14	47918036	47918066	protein_coding	Mapk1ip1l	utr5	ENSMUSG00000021840	ProperStrand	34	chr5	130295414	130295538	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	2	-10.3326
chr6	128324867	128324957	protein_coding	Foxm1	utr3	ENSMUSG00000001517	ProperStrand	31	chr2	26494722	26494802	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.3375
chr11	58745837	58745910	protein_coding	Rnf187	utr3	ENSMUSG00000020496	ProperStrand	26	chr18	35716686	35716786	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.6526
chr10	88204760	88204827	protein_coding	Arl1	exon	ENSMUSG00000060904	ProperStrand	15	chr13	23399501	23399533	tRNA	tRNA98-ValCAC	.	27507	ProperStrand	17	4	-inf
chr13	13851131	13851147	protein_coding	Lyst	intron	ENSMUSG00000019726	ProperStrand	5	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-12.8830
chr1	88423512	88425787	protein_coding	Ptma	exon	ENSMUSG00000026238	ProperStrand	385	chr5	124180544	124181052	protein_coding	Rsrc2	exon	ENSMUSG00000029422	ProperStrand	17	1	-12.1507
chr8	113407186	113407295	protein_coding	Fuk	utr3	ENSMUSG00000033703	ProperStrand	18	chr5	130300455	130300477	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.7422
chr19	5904518	5905420	protein_coding	Dpf2	exon	ENSMUSG00000024826	ProperStrand	38	chr17	24857718	24857808	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-5.3484
chr1	174492230	174492246	protein_coding	Vsig8	exon	ENSMUSG00000049598	ProperStrand	27	chr9	15119632	15119732	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.0899
chr19	6999468	6999486	protein_coding	1700019N12Rik	exon	ENSMUSG00000050623	ProperStrand	7	chr15	79908957	79909019	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-9.8509
chr18	35714143	35714162	lincRNA	Snhg4	intron	ENSMUSG00000090430	ProperStrand	270	chr10	75183837	75183915	protein_coding	Cabin1	intron	ENSMUSG00000020196	ProperStrand	62	1	-10.2325
chr9	30235085	30235102	protein_coding	Snx19	exon	ENSMUSG00000031993	ProperStrand	353	chr18	33954816	33954910	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-0.7539
chr4	55363283	55379665	protein_coding	Rad23b	exon	ENSMUSG00000028426	ProperStrand	86	chr14	76247742	76247842	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-3.5003
chr2	94262510	94277631	protein_coding	Api5	intron	ENSMUSG00000027193	ProperStrand	51	chr17	24857725	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	8	-19.4602
chr8	47663666	47663756	protein_coding	Mlf1ip	utr3	ENSMUSG00000031629	ProperStrand	25	chr18	33954825	33954905	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-5.1772
chr12	111878773	111878853	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr1	183848602	183848692	protein_coding	Enah	exon	ENSMUSG00000022995	ProperStrand	196	1	-6.2035
chr15	81535255	81535345	protein_coding	Rangap1	utr3	ENSMUSG00000022391	ProperStrand	69	chr18	33954838	33954918	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-3.2501
chr8	74008400	74008417	protein_coding	Ano8	exon	ENSMUSG00000034863	NonProperStrand	171	chr9	78327846	78327910	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	2	-7.1736
chr2	119747414	119747490	protein_coding-noncoding	Mga	utr5	ENSMUSG00000033943	ProperStrand	2	chr10	23505152	23505199	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-8.0476
chr6	88841686	88845443	protein_coding	Mcm2	intron	ENSMUSG00000002870	ProperStrand	83	chr16	23110876	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	9	-6.1461
chr8	74843008	74843336	protein_coding	Klf2	exon	ENSMUSG00000055148	ProperStrand	82	chrX	34622906	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-2.6186
chr2	37207523	37207590	protein_coding	Pdcl	exon	ENSMUSG00000009030	ProperStrand	32	chr1	162965534	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.4550
chr3	81856128	81856147	protein_coding	Gucy1b3	intron	ENSMUSG00000028005	ProperStrand	3	chr16	23111775	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-7.8619
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr11	62418016	62418044	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-1.5226
chr10	25701503	25701521	protein_coding	Tmem200a	intron	ENSMUSG00000092001	ProperStrand	19	chr7	29136532	29136632	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.4734
chr11	113730275	113731050	protein_coding	Sdk2	exon	ENSMUSG00000041592	NonProperStrand	98	chr15	34370561	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	20	-21.4516
chr18	60936133	60936186	protein_coding	Rps14	exon	ENSMUSG00000024608	ProperStrand	154	chr11	97642957	97642992	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.0443
chr11	119136228	119136244	protein_coding	Gaa	exon	ENSMUSG00000025579	NonProperStrand	201	chr15	38008367	38008385	protein_coding	Ubr5	utr5	ENSMUSG00000037487	ProperStrand	258	1	-7.9718
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr17	35089181	35089238	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	2	-3.4590
chr2	157294911	157294927	protein_coding	Src	exon	ENSMUSG00000027646	NonProperStrand	4	chr1	162967488	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-8.9926
chr9	4299367	4302483	protein_coding	Aasdhppt	exon	ENSMUSG00000025894	ProperStrand	121	chr9	43921307	43921344	protein_coding	Rnf26	utr5	ENSMUSG00000053128	ProperStrand	30	1	-13.3066
chr10	43250428	43250451	protein_coding	1700021F05Rik	exon	ENSMUSG00000019797	ProperStrand	7	chr16	23110829	23110873	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.4785
chr13	96374713	96374729	protein_coding	F2r	exon	ENSMUSG00000048376	NonProperStrand	88	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-2.3362
chr5	108336233	108336254	protein_coding	Rpl5	exon	ENSMUSG00000058558	ProperStrand	235	chr9	15118247	15118276	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-1.2281
chr7	112234807	112234824	protein_coding	Olfr679	exon	ENSMUSG00000073912	ProperStrand	1	chr11	69483190	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-inf
chr17	12789416	12789432	protein_coding	Slc22a2	intron	ENSMUSG00000040966	NonProperStrand	6	chr15	79654442	79654459	protein_coding	Cbx6	utr3	ENSMUSG00000089715	NonProperStrand	11	1	-18.8087
chr14	87912387	87912403	protein_coding	Tdrd3	utr3	ENSMUSG00000022019	NonProperStrand	46	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-11.2989
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr12	82764488	82764511	protein_coding	Ttc9	intron	ENSMUSG00000042734	NonProperStrand	8	1	-8.5166
chr9	78327086	78327197	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr16	91227718	91227735	protein_coding	Olig2	utr3	ENSMUSG00000039830	NonProperStrand	78	1	-5.8178
chr10	79595464	79595523	protein_coding-noncoding	Dos	utr3	ENSMUSG00000035640	ProperStrand	13	chr16	23110864	23110940	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	10	-20.0185
chr10	21062325	21064927	protein_coding	Hbs1l	exon	ENSMUSG00000019977	ProperStrand	27	chr7	116664794	116664874	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-4.0017
chr3	46250662	46250678	protein_coding	Pabpc4l	exon	ENSMUSG00000090919	ProperStrand	137	chr1	162965980	162965998	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-2.1536
chr12	88626061	88626079	protein_coding	Ism2	exon	ENSMUSG00000050671	ProperStrand	12	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-11.0125
chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	chr2	32818883	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-1.7550
chr18	61219834	61220865	protein_coding	Pdgfrb	exon	ENSMUSG00000024620	NonProperStrand	37	chr15	79913288	79913314	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.5050
chr17	34076548	34076704	protein_coding	H2-Ke2	exon	ENSMUSG00000024309	ProperStrand	8	chr17	35087897	35087964	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	2	-14.8925
chr2	26493425	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr10	41644311	41644329	protein_coding	Armc2	exon	ENSMUSG00000071324	ProperStrand	281	1	-3.2523
chrX	152009278	152009294	protein_coding	Ptchd1	exon	ENSMUSG00000041552	NonProperStrand	294	chr10	80641693	80641741	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	2	-7.3808
chr9	98300040	98304010	protein_coding	Nmnat3	exon	ENSMUSG00000032456	ProperStrand	5	chr5	130300436	130300526	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-7.4021
chr6	54379743	54379760	lincRNA	9130019P16Rik	exon	ENSMUSG00000073067	ProperStrand	255	chr16	23109028	23109076	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-4.4564
chrX	143889694	143889714	LINE	L1_Mus4	L1	chrXL1_Mus4143889614	ProperStrand	1	chr9	15119650	15119735	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-inf
chr19	46577250	46577328	protein_coding	Trim8	exon	ENSMUSG00000025034	ProperStrand	29	chr3	83965940	83965957	protein_coding	Trim2	utr3	ENSMUSG00000027993	ProperStrand	10	1	-18.8165
chr10	126433909	126435022	protein_coding	Ctdsp2	utr3	ENSMUSG00000078429	ProperStrand	74	chr10	23505151	23505213	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-3.1255
chr18	75161358	75161394	protein_coding	Rpl17	exon	ENSMUSG00000062328	ProperStrand	90	chr4	122457800	122457817	pseudogene	Gm12873	.	ENSMUSG00000083494	ProperStrand	3	1	-19.9688
chr1	31006488	31006578	protein_coding	Ptp4a1	utr5	ENSMUSG00000026064	ProperStrand	26	chr5	130300460	130300540	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-6.8058
chr19	5364999	5365034	protein_coding	Banf1	utr3	ENSMUSG00000024844	ProperStrand	34	chr1	162965530	162965601	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	4	-13.9842
chr11	102294590	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	1	-5.1240
chr17	45706273	45706325	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr3	127515241	127515257	protein_coding	Tifa	intron	ENSMUSG00000046688	ProperStrand	15	1	-9.5298
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr5	67418377	67418395	protein_coding	Limch1	intron	ENSMUSG00000037736	NonProperStrand	10	1	-12.5661
chr17	12958855	12958890	antisense	Airn	.	ENSMUSG00000078247	ProperStrand	5	chr9	120038552	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-8.0049
chr1	155287309	155287354	snoRNA	ENSMUSG00000064435_SNORA4	.	ENSMUSG00000064435	ProperStrand	263	chr1	162965531	162965575	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-3.0649
chr11	116535951	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr11	101306689	101306750	protein_coding	Rpl27	intron	ENSMUSG00000063316	ProperStrand	96	2	-8.2298
chr11	33060349	33060430	protein_coding	Npm1	exon	ENSMUSG00000057113	ProperStrand	352	chr6	71832550	71832628	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-2.3390
chr17	56451517	56451559	protein_coding	Uhrf1	exon	ENSMUSG00000001228	ProperStrand	229	chr15	34370545	34370650	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-1.3256
chr1	181699243	181699489	protein_coding	Ahctf1	exon	ENSMUSG00000026491	ProperStrand	39	chr11	69483185	69483275	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.2098
chr11	4121952	4122004	protein_coding	Gatsl3	utr3	ENSMUSG00000020424	ProperStrand	22	chr19	8798760	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-6.7808
chr8	125202944	125202961	protein_coding	Cbfa2t3	intron	ENSMUSG00000006362	ProperStrand	41	chr8	13416896	13416912	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-7.2115
chr6	136756891	136756979	protein_coding	H2afj	exon	ENSMUSG00000060032	ProperStrand	25	chr11	69483136	69483185	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-6.8218
chr8	109942053	109942230	protein_coding	Nob1	exon	ENSMUSG00000003848	ProperStrand	28	chr13	49779671	49779751	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-8.5419
chr6	120382064	120382154	protein_coding	Kdm5a	exon	ENSMUSG00000030180	ProperStrand	57	chr9	120038564	120038644	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.1312
chr4	147385913	147386003	protein_coding	Clcn6	intron	ENSMUSG00000029016	ProperStrand	120	chr7	116664819	116664899	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	10	-19.5822
chrX	98453608	98453688	protein_coding	Foxo4	exon	ENSMUSG00000042903	ProperStrand	15	chr16	56035894	56035984	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	1	-11.7624
chr3	95748182	95748262	protein_coding-noncoding	Anp32e	utr5	ENSMUSG00000015749	ProperStrand	2	chr3	95741921	95749132	protein_coding	Anp32e	exon	ENSMUSG00000015749	ProperStrand	25	1	-20.8701
chr16	32682993	32683026	protein_coding	Tnk2	utr3	ENSMUSG00000022791	ProperStrand	86	chr19	60844696	60844732	protein_coding	Eif3a	exon	ENSMUSG00000024991	ProperStrand	287	1	-9.4538
chr15	76736637	76736674	protein_coding	Rpl8	exon	ENSMUSG00000003970	ProperStrand	191	chr12	17552949	17552983	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-2.9276
chr13	9695037	9695054	protein_coding	Zmynd11	exon	ENSMUSG00000021156	ProperStrand	5	chr9	15118322	15118377	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-8.4764
chr3	142351261	142351279	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	1	-3.2565
chr4	131865854	131865944	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	NonProperStrand	39	chr9	120037901	120037981	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	NonProperStrand	19	1	-16.4463
chr5	3786284	3786342	protein_coding	Ankib1	intron	ENSMUSG00000040351	ProperStrand	12	chr1	30886915	30886950	protein_coding	Phf3	exon	ENSMUSG00000048874	ProperStrand	102	2	-20.8840
chr1	74720055	74720145	protein_coding	Ttll4	intron	ENSMUSG00000033257	ProperStrand	24	chr15	98350192	98350272	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-6.5641
chr15	9038120	9038136	protein_coding	1110020G09Rik	utr3	ENSMUSG00000022253	NonProperStrand	20	chr16	18280526	18280555	protein_coding	Dgcr8	exon	ENSMUSG00000022718	ProperStrand	67	1	-15.3173
chr2	90235315	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	73959073	73959109	protein_coding	Tns1	utr3	ENSMUSG00000055322	ProperStrand	63	1	-4.3696
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	1	-6.5794
chr13	107737212	107737228	protein_coding	Dimt1	utr5	ENSMUSG00000021692	ProperStrand	185	chr3	68889148	68889201	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-1.3999
chr8	13416896	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr12	100604796	100626743	protein_coding	Foxn3	intron	ENSMUSG00000033713	ProperStrand	74	3	-13.8888
chr4	131908809	131908897	lincRNA	Gm17300	exon	ENSMUSG00000091021	ProperStrand	109	chr14	31989884	31989938	protein_coding	Tnnc1	intron	ENSMUSG00000091898	ProperStrand	9	2	-19.6938
chr1	191742543	191742560	protein_coding	Smyd2	intron	ENSMUSG00000026603	NonProperStrand	2	chr5	121655098	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-11.0755
chr19	41952295	41952342	protein_coding	Rrp12	exon	ENSMUSG00000035049	ProperStrand	106	chr17	24665450	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	3	-9.4305
chr1	108644088	108644124	protein_coding	Kdsr	exon	ENSMUSG00000009905	ProperStrand	17	chr4	131865933	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-6.7782
chr1	63519166	63519262	protein_coding	Adam23	intron	ENSMUSG00000025964	ProperStrand	59	chr1	63225653	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-6.7014
chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr18	35716733	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	10	-1.0689
chr7	129138462	129138493	protein_coding	Gga2	exon	ENSMUSG00000030872	ProperStrand	65	chr7	29136525	29136633	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-3.9871
chr14	103872877	103872967	SINE	B4	B4	chr14B4103872717	NonProperStrand	1	chr10	39235632	39235712	protein_coding	Fyn	intron	ENSMUSG00000019843	ProperStrand	9	1	-inf
chr6	122679394	122679425	protein_coding	Slc2a3	utr3	ENSMUSG00000003153	ProperStrand	682	chr19	8798743	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-0.7896
chr1	152268927	152269668	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	chr10	23505576	23505624	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-3.3077
chr15	12797363	12797379	protein_coding	Drosha	exon	ENSMUSG00000022191	ProperStrand	163	chr8	73115775	73115791	protein_coding	Ell	utr3	ENSMUSG00000070002	NonProperStrand	134	1	-9.6957
chr4	131908689	131908785	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	chr13	22006727	22006758	tRNA	tRNA85-LeuCAA	.	250573	ProperStrand	54	6	-9.8678
chr7	34903806	34904166	protein_coding	Wtip	exon	ENSMUSG00000036459	ProperStrand	19	chr16	23110909	23110989	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-5.0037
chr10	81622791	81622881	LTR	RLTR12B	ERVK	chr10RLTR12B81622544	ProperStrand	4	chr6	67217302	67217392	protein_coding	Serbp1	exon	ENSMUSG00000036371	ProperStrand	261	1	-16.0396
chr8	114535777	114535794	protein_coding	Terf2ip	exon	ENSMUSG00000033430	NonProperStrand	2	chr19	8963038	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-9.4105
chr10	79509921	79509954	protein_coding-noncoding	Gpx4	utr5	ENSMUSG00000075706	ProperStrand	1	chr17	35299543	35299633	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-inf
chr14	31867350	31867368	protein_coding	Pbrm1	exon	ENSMUSG00000042323	ProperStrand	87	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.9190
chr2	53003875	53009703	protein_coding	Prpf40a	exon	ENSMUSG00000061136	ProperStrand	129	chr2	26493364	26493442	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	10	-21.3973
chr1	134386915	134386935	protein_coding	Rbbp5	intron	ENSMUSG00000026439	ProperStrand	22	chr7	29136581	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.1896
chr19	30188217	30188268	protein_coding	Gldc	exon	ENSMUSG00000024827	ProperStrand	175	chr12	80276976	80276993	protein_coding	Rdh11	utr3	ENSMUSG00000066441	NonProperStrand	23	1	-13.1061
chr7	116663698	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	chr1	162967735	162967806	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	8	-7.8127
chr16	37515954	37522860	protein_coding	Gtf2e1	exon	ENSMUSG00000022828	ProperStrand	16	chr14	45478163	45478180	protein_coding	Ptgdr	exon	ENSMUSG00000071489	NonProperStrand	1	1	-inf
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr12	52977770	52977800	protein_coding	Heatr5a	utr3	ENSMUSG00000035181	ProperStrand	21	1	-9.0365
chr18	37911790	37911806	protein_coding	Pcdhga9	intron	ENSMUSG00000023036	ProperStrand	245	chr8	13167955	13171222	protein_coding	Lamp1	exon	ENSMUSG00000031447	ProperStrand	92	1	-9.6344
chrX	6211035	6211135	protein_coding	Shroom4	utr3	ENSMUSG00000068270	ProperStrand	22	chr4	131908809	131908874	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.8292
chr10	60887357	60887400	protein_coding	Nodal	utr3	ENSMUSG00000037171	ProperStrand	30	chr15	34370545	34370573	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-4.8662
chr16	57391725	57391761	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr2	181120335	181120352	pseudogene	Slc2a4rg-ps	.	ENSMUSG00000085028	NonProperStrand	1	1	-inf
chr19	58933921	58934011	protein_coding	Hspa12a	intron	ENSMUSG00000025092	ProperStrand	10	chr8	73419695	73419775	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-6.6208
chr4	56910495	56910618	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	3	-1.1091
chr6	18951845	18951935	LINE	L1_Mus1	L1	chr6L1_Mus118951804	NonProperStrand	1	chr7	110699217	110699307	protein_coding	Olfr613	utr5	ENSMUSG00000078624	ProperStrand	16	1	-inf
chr5	23928893	23928910	protein_coding	Cdk5	intron	ENSMUSG00000028969	NonProperStrand	11	chr17	24857717	24857775	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-5.4831
chr11	119641908	119660090	protein_coding	Rptor	exon	ENSMUSG00000025583	NonProperStrand	13	chr11	6428088	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-6.1494
chr17	47631369	47633537	protein_coding	Taf8	exon	ENSMUSG00000023980	ProperStrand	25	chr5	108336373	108336463	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	4	-20.1259
chr17	94768315	94768333	LINE	L1_Mus3	L1	chr17L1_Mus394764195	ProperStrand	24	chr1	162965530	162965567	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.0142
chr7	133726521	133726538	protein_coding	Cln3	exon	ENSMUSG00000030720	ProperStrand	87	chr8	28135587	28135613	protein_coding	Erlin2	exon	ENSMUSG00000031483	ProperStrand	14	1	-15.5325
chr4	118807047	118808395	protein_coding	Slc2a1	exon	ENSMUSG00000028645	ProperStrand	361	chr15	98350203	98350283	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-1.5999
chr19	12011743	12011819	protein_coding	Patl1	exon	ENSMUSG00000046139	ProperStrand	49	chr16	23110852	23110873	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.1188
chr6	29491637	29491679	protein_coding	Tnpo3	utr3	ENSMUSG00000012535	ProperStrand	58	chr19	7532308	7532324	protein_coding	Rtn3	exon	ENSMUSG00000024758	ProperStrand	35	1	-14.4802
chr1	92030095	92030114	protein_coding	Iqca	intron	ENSMUSG00000026301	ProperStrand	13	chr4	107053309	107054354	protein_coding	Tmem48	intron	ENSMUSG00000028614	ProperStrand	42	1	-17.2027
chr3	121160083	121160122	protein_coding	Cnn3	exon	ENSMUSG00000053931	ProperStrand	77	chr4	131908687	131908807	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-2.9835
chr11	51547350	51547402	protein_coding	Sec24a	exon	ENSMUSG00000036391	ProperStrand	42	chr17	24857763	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.9140
chr3	129417287	129417304	protein_coding	Egf	intron	ENSMUSG00000028017	ProperStrand	6	chr5	121655052	121655142	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-13.6219
chr4	11099553	11099581	protein_coding	Trp53inp1	utr3	ENSMUSG00000028211	ProperStrand	35	chr5	115939507	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-8.9477
chr1	108260847	108260880	protein_coding	Phlpp1	exon	ENSMUSG00000044340	ProperStrand	67	chr9	15118340	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.2651
chr9	65541152	65541242	protein_coding	Zfp609	utr3	ENSMUSG00000040524	ProperStrand	87	chr10	110918555	110918635	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-2.7815
chr5	115939500	115939614	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr8	98269959	98270059	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	4	-4.2459
chr7	152050400	152050433	protein_coding	Fgf4	utr3	ENSMUSG00000050917	ProperStrand	66	chr4	131908689	131908800	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-2.1502
chr7	125252684	125253489	protein_coding	Rps15a	exon	ENSMUSG00000008683	ProperStrand	28	chr10	23505152	23505215	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-4.3109
chr4	43505656	43505887	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr6	122268318	122268337	protein_coding	Phc1	utr3	ENSMUSG00000040669	NonProperStrand	31	21	-19.8407
chr6	119888035	119889670	protein_coding	Wnk1	exon	ENSMUSG00000045962	ProperStrand	221	chr11	55296276	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-3.6771
chr8	23110568	23110585	protein_coding	Atp7b	exon	ENSMUSG00000006567	NonProperStrand	2	chr11	106362556	106362635	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-14.8626
chr10	57955773	57955862	protein_coding	Ranbp2	exon	ENSMUSG00000003226	ProperStrand	52	chr9	15118304	15118366	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.7315
chr12	86640921	86640985	protein_coding	Nek9	utr3	ENSMUSG00000034290	ProperStrand	50	chr9	64143757	64143847	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-8.1371
chr9	64574580	64574609	protein_coding	Rab11a	exon	ENSMUSG00000004771	ProperStrand	27	chr15	8157565	8157624	protein_coding	2410089E03Rik	intron	ENSMUSG00000039801	ProperStrand	43	1	-15.6097
chrX	45788962	45788979	protein_coding	Elf4	intron	ENSMUSG00000031103	NonProperStrand	49	chr8	73419355	73419378	protein_coding	Rpl18a	exon	ENSMUSG00000045128	ProperStrand	394	1	-9.9512
chr4	118808883	118808973	protein_coding	Slc2a1	exon	ENSMUSG00000028645	ProperStrand	361	chr12	17552954	17553034	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-1.8614
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr2	110715926	110715944	protein_coding	Ano3	intron	ENSMUSG00000074968	NonProperStrand	2	1	-15.2570
chr7	72471172	72471272	protein_coding	Tjp1	exon	ENSMUSG00000030516	ProperStrand	78	chr16	38158169	38158222	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	2	-12.9561
chr2	118748649	118748753	protein_coding	Bahd1	utr3	ENSMUSG00000040007	ProperStrand	10	chr16	23111452	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.3721
chr5	74489543	74489563	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr12	114290175	114290191	protein_coding	Pacs2	intron	ENSMUSG00000021143	NonProperStrand	302	1	-2.6082
chr2	90235295	90235324	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	116016097	116016113	protein_coding	Fbf1	exon	ENSMUSG00000020776	NonProperStrand	36	1	-5.4531
chrX	138122609	138122626	protein_coding	Col4a5	exon	ENSMUSG00000031274	ProperStrand	8	chr4	155553231	155553282	protein_coding	Agrn	exon	ENSMUSG00000041936	ProperStrand	175	1	-15.2801
chr5	137971414	137971440	protein_coding	Gnb2	exon	ENSMUSG00000029713	ProperStrand	23	chr5	19284183	19284199	protein_coding	Magi2	intron	ENSMUSG00000040003	ProperStrand	49	1	-15.6720
chr18	35022361	35022411	protein_coding	Egr1	exon	ENSMUSG00000038418	ProperStrand	3	chr16	23111731	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-inf
chr4	55431651	55431669	lincRNA	Gm12505	exon	ENSMUSG00000087070	ProperStrand	447	chr9	120039581	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-0.9578
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr9	120037985	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	3	-3.1857
chr1	132742959	132742975	protein_coding	Pigr	exon	ENSMUSG00000026417	NonProperStrand	48	chr6	145564547	145564563	protein_coding	Tuba3b	utr5	ENSMUSG00000067338	ProperStrand	152	1	-11.8977
chr18	20993560	20995313	protein_coding	Trappc8	exon	ENSMUSG00000033382	ProperStrand	43	chr11	6428035	6428101	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.8060
chr10	12103937	12121118	protein_coding	Utrn	utr3	ENSMUSG00000019820	ProperStrand	69	chr5	108334200	108334280	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-4.5514
chr10	7322634	7322734	protein_coding	Lrp11	exon	ENSMUSG00000019796	ProperStrand	12	chr13	113342177	113342193	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	2	-18.6699
chr15	81110991	81111009	SINE	ID4	ID	chr15ID481110956	ProperStrand	272	chr13	55418467	55418500	protein_coding	Nsd1	utr3	ENSMUSG00000021488	ProperStrand	186	1	-8.0210
chr8	109894327	109894427	protein_coding	Nfat5	exon	ENSMUSG00000003847	ProperStrand	29	chr7	118219574	118219626	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-5.5787
chr6	81992905	81992921	protein_coding	Fam176a	intron	ENSMUSG00000035104	ProperStrand	64	chr8	129468758	129468858	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-4.2908
chr13	53285956	53285978	protein_coding	Ror2	intron	ENSMUSG00000021464	ProperStrand	46	chr4	131908236	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	6	-11.8337
chr18	65052348	65052368	protein_coding	Nedd4l	intron	ENSMUSG00000024589	ProperStrand	44	chr11	74718976	74719009	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	1	-9.6492
chr2	129998668	129998696	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr4	86423726	86423856	protein_coding	Dennd4c	exon	ENSMUSG00000038024	ProperStrand	42	5	-inf
chr2	162356087	162356104	protein_coding	Ptprt	intron	ENSMUSG00000053141	NonProperStrand	46	chr17	35088965	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-6.3923
chr17	4082147	4082261	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr5	130300473	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-1.4090
chr3	96066027	96066046	protein_coding	Hist2h4	utr3	ENSMUSG00000091405	NonProperStrand	1	chr4	131908356	131908418	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-inf
chr11	4970239	4970321	protein_coding	Ewsr1	exon	ENSMUSG00000009079	ProperStrand	248	chr7	117190036	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-1.0603
chr8	122032670	122070080	protein_coding	Mbtps1	utr3	ENSMUSG00000031835	ProperStrand	81	chr16	23110841	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	11	-9.0639
chr10	80645094	80645179	protein_coding	Eef2	utr3	ENSMUSG00000034994	ProperStrand	2244	chr1	173041632	173041649	tRNA	tRNA710-ValCAC	.	623273	ProperStrand	206	2	-6.2976
chr3	10346230	10347179	protein_coding	Zfand1	exon	ENSMUSG00000039795	ProperStrand	8	chr10	6450631	6450649	protein_coding	Plekhg1	intron	ENSMUSG00000040624	NonProperStrand	75	1	-17.0121
chr18	10052130	10052153	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr7	24713726	24713742	protein_coding	Vmn1r179	exon	ENSMUSG00000046924	NonProperStrand	69	1	-8.5210
chr5	3928437	3928453	protein_coding	Akap9	utr5	ENSMUSG00000040407	ProperStrand	28	chr8	73419685	73419775	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.5584
chr16	32230673	32230691	protein_coding	Fbxo45	utr3	ENSMUSG00000035764	NonProperStrand	10	chr11	6428103	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-6.6888
chr16	18284193	18284234	protein_coding	Dgcr8	exon	ENSMUSG00000022718	ProperStrand	67	chr2	26494779	26494829	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.9099
chr2	30114226	30114271	protein_coding	Lrrc8a	intron	ENSMUSG00000007476	ProperStrand	17	chr14	19102839	19102939	protein_coding	Rpl15	exon	ENSMUSG00000012405	ProperStrand	145	2	-22.8375
chr5	67789568	67789586	protein_coding	Bend4	exon	ENSMUSG00000092060	ProperStrand	56	chr4	122968617	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-6.4172
chrX	54751845	54751861	protein_coding	Gpr101	utr3	ENSMUSG00000036357	ProperStrand	24	chr4	131865869	131865906	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.3401
chr19	40654437	40654539	protein_coding	Aldh18a1	exon	ENSMUSG00000025007	ProperStrand	19	chr7	29136619	29136653	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.4734
chr4	8462930	8462948	protein_coding	Rab2a	utr5	ENSMUSG00000047187	NonProperStrand	1	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-inf
chr4	82114659	82114675	protein_coding	Nfib	intron	ENSMUSG00000008575	ProperStrand	50	chr11	84722945	84722961	protein_coding	Myo19	exon	ENSMUSG00000020527	ProperStrand	82	1	-13.0548
chr11	69161947	69161964	protein_coding	Chd3	exon	ENSMUSG00000018474	ProperStrand	438	chr1	63225588	63225638	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-2.8909
chr10	40657879	40657930	protein_coding	Wasf1	utr3	ENSMUSG00000019831	ProperStrand	12	chr4	131908689	131908745	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.9639
chr2	90235312	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	73434618	73434634	antisense	Gm13704	.	ENSMUSG00000086544	NonProperStrand	53	1	-4.7006
chr15	10504979	10504995	protein_coding	Rai14	exon	ENSMUSG00000022246	ProperStrand	180	chr11	106362639	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-5.2431
chr10	67697065	67697082	protein_coding	Arid5b	intron	ENSMUSG00000019947	NonProperStrand	14	chr11	106362329	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-8.7702
chr10	5634068	5634084	protein_coding	Esr1	exon	ENSMUSG00000019768	NonProperStrand	24	chr7	134177478	134177528	protein_coding	Kif22	exon	ENSMUSG00000030677	ProperStrand	63	1	-15.0822
chr13	9833550	9833606	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr4	117908893	117908958	protein_coding	Ptprf	exon	ENSMUSG00000033295	ProperStrand	337	1	-1.8595
chr13	9833559	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr8	108409779	108409832	protein_coding	Edc4	exon	ENSMUSG00000036270	ProperStrand	34	2	-9.8815
chr3	97950310	97950400	protein_coding	Notch2	exon	ENSMUSG00000027878	ProperStrand	86	chr8	96676931	96677831	protein_coding	Mt3	exon	ENSMUSG00000031760	ProperStrand	1	1	-inf
chr17	24665418	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	chr6	131330321	131330411	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	ProperStrand	408	2	-2.8957
chr7	148247290	148247380	protein_coding	B4galnt4	intron	ENSMUSG00000055629	ProperStrand	11	chr16	23110456	23110536	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.6740
chr4	134773030	134773084	protein_coding	Clic4	exon	ENSMUSG00000037242	ProperStrand	84	chr7	117190020	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.7314
chr7	106628091	106628181	snoRNA	ENSMUSG00000064966_Snord15b	.	ENSMUSG00000064966	ProperStrand	74	chr7	116663631	116663711	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-3.8718
chr9	77602490	77602508	protein_coding	Gclc	utr5	ENSMUSG00000032350	NonProperStrand	4	chr3	68889072	68889172	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-8.7538
chr1	72871430	72871517	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	chr9	15118344	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-1.2522
chr7	95319369	95319459	LINE	L1Md_F3	L1	chr7L1Md_F395315679	ProperStrand	1	chr7	56743509	56743599	protein_coding	Nav2	intron	ENSMUSG00000052512	NonProperStrand	11	1	-inf
chr12	114290175	114290191	protein_coding	Pacs2	intron	ENSMUSG00000021143	NonProperStrand	302	chr10	23506322	23506348	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-3.8209
chr16	23110829	23110873	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	chr13	65259564	65259608	snoRNA	ENSMUSG00000089161_SNORA48	.	ENSMUSG00000089161	ProperStrand	28	1	-1.1386
chr8	125626885	125628978	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	chr7	116663635	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	5	-4.5598
chr15	6694360	6695463	protein_coding	Rictor	exon	ENSMUSG00000050310	ProperStrand	21	chr19	11550846	11550864	protein_coding	Ms4a6c	intron	ENSMUSG00000079419	NonProperStrand	3	1	-inf
chr11	69811808	69811898	protein_coding	Phf23	exon	ENSMUSG00000018572	ProperStrand	25	chr19	8963096	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.8447
chr8	77554359	77554459	protein_coding	Hmgxb4	utr3	ENSMUSG00000034518	ProperStrand	25	chr1	162965550	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-8.1837
chr2	163880100	163880200	protein_coding	Tomm34	utr3	ENSMUSG00000018322	ProperStrand	10	chr5	147646815	147646848	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	1	-11.6157
chr13	93893708	93893727	protein_coding	Cmya5	intron	ENSMUSG00000047419	NonProperStrand	8	chr16	23110455	23110522	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-6.3329
chrX	150765543	150765559	LINE	L1_Mus2	L1	chrXL1_Mus2150765117	NonProperStrand	49	chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	1	-11.7792
chr11	21040584	21040600	protein_coding	Peli1	exon	ENSMUSG00000020134	ProperStrand	69	chr8	73419673	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.8808
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr18	80471386	80471405	protein_coding-noncoding	Pqlc1	utr5	ENSMUSG00000034006	NonProperStrand	1	1	-inf
chr19	8798440	8799817	lincRNA	Snhg1	exon	ENSMUSG00000090867	ProperStrand	100	chr16	23111394	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-2.3035
chr7	87460840	87460978	protein_coding	Prc1	utr3	ENSMUSG00000038943	ProperStrand	35	chr13	8766291	8766308	protein_coding	Adarb2	utr3	ENSMUSG00000052551	ProperStrand	292	1	-11.2291
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	127332183	127332201	Low_complexity	C-rich	Low_complexity	chr1C-rich127332120	NonProperStrand	6	1	-9.1372
chr7	133940884	133940931	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	chr7	118219574	118219635	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-0.9313
chr10	79430091	79430232	protein_coding	Wdr18	exon	ENSMUSG00000035754	ProperStrand	16	chr16	23111395	23111485	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-5.9711
chr2	26249061	26250547	protein_coding	Pmpca	exon	ENSMUSG00000026926	ProperStrand	45	chr4	147520990	147521008	protein_coding	Fbxo6	exon	ENSMUSG00000055401	ProperStrand	26	1	-15.5721
chr14	51427155	51427191	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr6	94776857	94776875	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	1	-3.1717
chr2	25312429	25313191	protein_coding	Clic3	exon	ENSMUSG00000015093	ProperStrand	79	chr5	37664701	37664748	protein_coding	Crmp1	exon	ENSMUSG00000029121	ProperStrand	85	2	-18.6903
chr13	110231347	110231365	protein_coding	Pde4d	intron	ENSMUSG00000021699	ProperStrand	92	chr4	131866642	131866676	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	1	-8.2496
chr4	132748069	132748132	protein_coding	Wasf2	exon	ENSMUSG00000028868	ProperStrand	56	chr1	162967137	162967178	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	1	-8.8178
chr19	45101053	45101153	protein_coding	Lzts2	utr3	ENSMUSG00000035342	ProperStrand	14	chr7	29136584	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.0758
chr4	132713306	132713323	protein_coding	Wasf2	intron	ENSMUSG00000028868	ProperStrand	56	chr9	114463416	114463496	protein_coding	Trim71	intron	ENSMUSG00000079259	ProperStrand	162	1	-11.4591
chr1	134905446	134905536	protein_coding	Mdm4	intron	ENSMUSG00000054387	ProperStrand	95	chr8	129468799	129468879	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-3.5517
chr12	27874148	27874164	LTR	ORR1E	MaLR	chr12ORR1E27874117	NonProperStrand	27	chr4	131908396	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.7097
chr4	116862585	116862662	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	chr4	122968612	122968712	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-2.1387
chr11	94962387	94962404	SINE	B1_Mur4	Alu	chr11B1_Mur494962251	ProperStrand	2	chr11	68936358	68936374	protein_coding	Hes7	exon	ENSMUSG00000023781	NonProperStrand	66	1	-inf
chr11	87418328	87418345	protein_coding	Mtmr4	exon	ENSMUSG00000018401	NonProperStrand	4	chr7	52382767	52382832	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-12.4078
chr8	26818308	26818388	protein_coding-noncoding	Whsc1l1	utr5	ENSMUSG00000054823	ProperStrand	3	chr8	26818702	26818791	protein_coding	Whsc1l1	intron	ENSMUSG00000054823	ProperStrand	36	1	-inf
chr18	39934974	39934990	protein_coding	Pabpc2	exon	ENSMUSG00000051732	NonProperStrand	66	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.1039
chr8	74843336	74843368	protein_coding	Klf2	exon	ENSMUSG00000055148	ProperStrand	82	chr8	32260335	32260428	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	2	-6.7751
chr3	144817603	144817621	LINE	Lx9	L1	chr3Lx9144817450	ProperStrand	30	chr4	131865855	131865910	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-7.5994
chr11	115660789	115660879	protein_coding	Caskin2	utr3	ENSMUSG00000034471	ProperStrand	17	chr5	74489563	74489643	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-6.2343
chr2	90235292	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr15	98356776	98356815	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	2	-0.7278
chrX	135868880	135868905	protein_coding	Trap1a	exon	ENSMUSG00000051257	ProperStrand	66	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-5.8474
chr1	196640459	196640476	protein_coding	Plxna2	utr3	ENSMUSG00000026640	NonProperStrand	17	chr11	62416578	62416625	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-7.6793
chr9	120403328	120403359	protein_coding	Eif1b	exon	ENSMUSG00000006941	ProperStrand	7	chr10	23505152	23505256	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-inf
chr8	72704674	72704713	protein_coding	Tmem161a	exon	ENSMUSG00000002342	ProperStrand	42	chr18	35716836	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-7.2332
chr2	158451026	158451043	protein_coding	Actr5	exon	ENSMUSG00000037761	NonProperStrand	94	chr8	73419657	73419728	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	5	-11.0928
chr14	37944809	37944826	protein_coding	Ghitm	exon	ENSMUSG00000041028	ProperStrand	26	chr4	131908688	131908771	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-9.3064
chr1	91441811	91441829	protein_coding	Agap1	intron	ENSMUSG00000055013	NonProperStrand	32	chr7	116663633	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	5	-15.5237
chr12	110888919	110888948	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr1	162968442	162968489	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	2	-3.3378
chr19	6248245	6248262	protein_coding	Atg2a	exon	ENSMUSG00000024773	NonProperStrand	9	chr16	23111741	23111812	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-9.0498
chr2	132127033	132127912	protein_coding	Cds2	exon	ENSMUSG00000058793	ProperStrand	47	chr5	108336413	108336490	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-5.3555
chr8	95523935	95523951	protein_coding	Slc6a2	utr3	ENSMUSG00000055368	NonProperStrand	21	chr8	98269959	98270084	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	6	-20.1168
chr1	136527324	136527883	protein_coding	Kdm5b	utr3	ENSMUSG00000042207	ProperStrand	223	chr1	89673619	89673709	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-1.1486
chr12	11157083	11157102	protein_coding	Kcns3	utr5	ENSMUSG00000043673	ProperStrand	19	chr15	98350206	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-7.0352
chr6	122273105	122275538	protein_coding	Phc1	exon	ENSMUSG00000040669	ProperStrand	158	chr7	116663633	116663762	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-2.0471
chr6	124761316	124761397	protein_coding	Tpi1	exon	ENSMUSG00000023456	ProperStrand	94	chr10	23505152	23505230	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-4.9637
chr13	62644635	62644698	snoRNA	ENSMUSG00000075946_SNORA25	.	ENSMUSG00000075946	ProperStrand	11	chr6	71832550	71832587	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-9.0343
chr1	28957059	28957077	LINE	L2	L2	chr1L228956945	NonProperStrand	2	chr16	23110828	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-inf
chr19	42488540	42488623	protein_coding	Crtac1	exon	ENSMUSG00000042401	ProperStrand	26	chr11	83107826	83107903	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	1	-10.5245
chr7	148634640	148636949	protein_coding	Rplp2	exon	ENSMUSG00000025508	ProperStrand	106	chr11	62416635	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-6.8336
chr3	105746659	105746738	protein_coding	Atp5f1	exon	ENSMUSG00000000563	ProperStrand	28	chr7	152118581	152118597	protein_coding	Ccnd1	exon	ENSMUSG00000070348	ProperStrand	93	1	-13.9761
chr4	125300879	125309589	protein_coding	Grik3	exon	ENSMUSG00000001985	ProperStrand	126	chrX	34622906	34622960	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-1.9062
chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	chr14	51548979	51549298	protein_coding	Tmem55b	exon	ENSMUSG00000035953	ProperStrand	14	1	-12.7213
chr11	75218469	75218548	protein_coding	Smyd4	utr3	ENSMUSG00000018809	ProperStrand	11	chr11	116535513	116535539	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	1	-9.3408
chr12	60235045	60235135	protein_coding	Ctage5	intron	ENSMUSG00000021000	ProperStrand	35	chr19	8800361	8800441	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-4.5474
chr9	40612882	40612921	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	chr3	88497863	88497975	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-3.8086
chr13	38265736	38266979	protein_coding	Dsp	exon	ENSMUSG00000054889	ProperStrand	23	chr12	17552962	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-6.9871
chr11	100343137	100343524	protein_coding	Acly	exon	ENSMUSG00000020917	ProperStrand	183	chr17	24857719	24857799	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-0.7196
chr9	85220675	85220691	protein_coding	Fam46a	utr5	ENSMUSG00000032265	NonProperStrand	21	chr1	36214957	36214991	protein_coding	Uggt1	exon	ENSMUSG00000037470	ProperStrand	67	1	-15.2124
chr10	126502001	126502253	protein_coding	Cdk4	exon	ENSMUSG00000006728	ProperStrand	47	chr8	129468746	129468781	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	2	-8.0770
chr1	46132904	46132993	protein_coding	Dnahc7b	intron	ENSMUSG00000041144	NonProperStrand	57	chr5	121655031	121655111	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.8433
chr17	35822057	35822257	protein_coding	Ddr1	exon	ENSMUSG00000003534	ProperStrand	129	chr11	77995191	77995252	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	3	-11.1354
chr16	5256015	5256031	protein_coding	Fam86	utr5	ENSMUSG00000022544	ProperStrand	231	chr4	125841460	125841530	protein_coding	Thrap3	utr3	ENSMUSG00000043962	ProperStrand	84	1	-9.9345
chr1	53409486	53409502	protein_coding	Asnsd1	utr5	ENSMUSG00000026095	NonProperStrand	105	chr13	114408478	114408500	protein_coding	Snx18	exon	ENSMUSG00000042364	ProperStrand	47	1	-12.6834
chr13	17985109	17988795	protein_coding	Rala	exon	ENSMUSG00000008859	ProperStrand	15	chr10	23505191	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-12.2626
chr5	53133106	53133206	protein_coding	Pi4k2b	exon	ENSMUSG00000029186	ProperStrand	27	chr17	24857802	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.7240
chr18	39050418	39050502	protein_coding	Fgf1	intron	ENSMUSG00000036585	ProperStrand	14	chr5	74489564	74489654	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	2	-10.7976
chr15	58831519	58831563	protein_coding	Mtss1	intron	ENSMUSG00000022353	ProperStrand	68	chr12	110919730	110919753	snoRNA	ENSMUSG00000065022_AF357341	.	ENSMUSG00000065022	ProperStrand	7	2	-21.0815
chr8	71878713	71878803	LINE	L1Md_F	L1	chr8L1Md_F71878691	NonProperStrand	2	chr8	68385248	68385328	protein_coding	March1	intron	ENSMUSG00000036469	ProperStrand	13	1	-inf
chr16	57391758	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr18	38460664	38460747	protein_coding	Rnf14	intron	ENSMUSG00000060450	ProperStrand	9	1	-11.6719
chr6	143007910	143007928	protein_coding	5730419I09Rik	intron	ENSMUSG00000030279	ProperStrand	81	chr7	116664150	116665143	protein_coding	Rpl27a	exon	ENSMUSG00000046364	ProperStrand	149	1	-10.8844
chr12	111886843	111886883	protein_coding	Dync1h1	intron	ENSMUSG00000018707	ProperStrand	648	chr16	43886796	43886846	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	1	-3.4643
chr3	68876667	68876684	protein_coding	Kpna4	utr3	ENSMUSG00000027782	NonProperStrand	3	chr4	131908355	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-7.2242
mmu-miR-1949	0	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr14	33005115	33005178	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	3	-1.2236
chr11	116535461	116535531	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr3	30995818	30995855	protein_coding	Skil	utr5	ENSMUSG00000027660	ProperStrand	23	2	-12.5500
chrX	166421839	166421939	protein_coding	Mid1	intron	ENSMUSG00000035299	ProperStrand	209	chr11	77995188	77995254	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-3.7829
chr17	23955820	23955839	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	chr17	48642923	48642942	protein_coding	Unc5cl	intron	ENSMUSG00000043592	NonProperStrand	2	1	-inf
chr7	86047681	86047698	protein_coding	Aen	exon	ENSMUSG00000030609	ProperStrand	17	chr4	131908809	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.3002
chr10	23505542	23505627	protein_coding	Rps12	intron	ENSMUSG00000061983	ProperStrand	309	chr12	106269303	106269358	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	5	-7.5407
chr11	29147118	29147178	protein_coding	Ccdc104	utr5	ENSMUSG00000020462	ProperStrand	20	chr12	112779235	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	2	-11.2407
chr10	107800823	107800848	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	chr2	130101257	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-1.7729
chrX	70282197	70282270	protein_coding	Pnma5	exon	ENSMUSG00000050424	ProperStrand	12	chr17	35087894	35087937	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-8.4310
chr4	86500617	86500709	protein_coding	Rps6	exon	ENSMUSG00000028495	NonProperStrand	3	chr7	134088749	134088785	protein_coding	Kctd13	utr3	ENSMUSG00000030685	NonProperStrand	3	1	-inf
chr2	37502726	37502742	protein_coding	Strbp	utr5	ENSMUSG00000026915	ProperStrand	90	chr8	122048470	122048491	protein_coding	Mbtps1	exon	ENSMUSG00000031835	ProperStrand	81	1	-11.8957
chr7	103996618	104000911	protein_coding	Odz4	exon	ENSMUSG00000048078	ProperStrand	93	chr7	117189996	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.5552
chr17	34164817	34164907	processed_transcript	Gm20427	.	ENSMUSG00000092595	NonProperStrand	4	chr17	34164690	34164780	protein_coding	H2-Ke6	exon	ENSMUSG00000073422	NonProperStrand	4	4	-inf
chr12	104317206	104317223	protein_coding	Unc79	exon	ENSMUSG00000021198	ProperStrand	99	chr4	131865855	131865987	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-2.0754
chr17	46301603	46301683	protein_coding-noncoding	Gtpbp2	utr5	ENSMUSG00000023952	ProperStrand	11	chr17	46301701	46301943	protein_coding	Gtpbp2	exon	ENSMUSG00000023952	ProperStrand	21	4	-19.9269
chr12	111904005	111904246	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr3	35977363	35979152	protein_coding	Acad9	exon	ENSMUSG00000027710	ProperStrand	11	1	-12.0128
chr4	140877643	140877693	protein_coding	Epha2	exon	ENSMUSG00000006445	ProperStrand	148	chr15	100416584	100416600	protein_coding	Pou6f1	intron	ENSMUSG00000009739	ProperStrand	44	1	-12.1262
chr14	52634377	52634396	protein_coding	Zfp219	intron	ENSMUSG00000049295	NonProperStrand	3	chr19	8799845	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-11.2482
chrX	160623746	160625427	protein_coding	Ace2	exon	ENSMUSG00000015405	NonProperStrand	3	chrX	132335862	132335974	protein_coding	Gprasp1	exon	ENSMUSG00000043384	ProperStrand	57	1	-19.4146
chr16	72800514	72800532	protein_coding	Robo1	intron	ENSMUSG00000022883	NonProperStrand	188	chr8	107783510	107783527	protein_coding	Tradd	exon	ENSMUSG00000031887	ProperStrand	23	1	-12.9626
chr3	95466555	95466648	protein_coding	Mcl1	utr3	ENSMUSG00000038612	ProperStrand	75	chr10	23506278	23506306	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-6.5052
chr14	52793464	52793555	protein_coding	Supt16h	exon	ENSMUSG00000035726	ProperStrand	193	chr7	54107264	54107351	protein_coding	Ldha	exon	ENSMUSG00000063229	ProperStrand	280	6	-inf
chr10	118648502	118649101	protein_coding	Cand1	exon	ENSMUSG00000020114	ProperStrand	76	chr4	131908688	131908739	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-1.8475
chr13	23623324	23623346	protein_coding	Hist1h4h	utr3	ENSMUSG00000060981	ProperStrand	30	chr4	131908810	131908871	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.2894
chr8	97533605	97533665	protein_coding	Gpr56	exon	ENSMUSG00000031785	ProperStrand	4	chr9	39882020	39882036	protein_coding	Olfr982	exon	ENSMUSG00000049010	NonProperStrand	35	1	-inf
chrX	16242910	16250011	protein_coding	Maoa	exon	ENSMUSG00000025037	ProperStrand	17	chr11	118900007	118900025	protein_coding	Cbx8	exon	ENSMUSG00000025578	ProperStrand	95	1	-14.9508
chr5	108334222	108336484	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	chr6	71832603	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	9	-2.1567
chr8	125907271	125907321	protein_coding	Tcf25	exon	ENSMUSG00000001472	ProperStrand	66	chr1	153205664	153205681	protein_coding	Ivns1abp	intron	ENSMUSG00000023150	ProperStrand	51	1	-13.4526
chr12	110783221	110783237	lincRNA	Meg3	exon	ENSMUSG00000021268	ProperStrand	61	chr13	54723202	54723218	protein_coding	Faf2	exon	ENSMUSG00000025873	ProperStrand	90	1	-12.4654
chr18	73693109	73693150	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr11	6519810	6519926	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	2	-1.8486
chr18	12172461	12172477	protein_coding	6030446N20Rik	intron	ENSMUSG00000049411	ProperStrand	235	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-6.2156
chr12	57564487	57564577	LINE	Lx7	L1	chr12Lx757563756	NonProperStrand	1	chr18	25341520	25341600	protein_coding	AW554918	intron	ENSMUSG00000033632	ProperStrand	23	1	-inf
chr4	126000963	126000979	protein_coding	Tekt2	exon	ENSMUSG00000028845	ProperStrand	31	chr10	23505152	23505203	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.2459
chr15	12782808	12845132	protein_coding	Drosha	intron	ENSMUSG00000022191	ProperStrand	163	chr11	69483136	69483277	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-1.9040
chr1	102076755	102076794	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	chr11	98878344	98878462	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	8	-18.8744
chr1	130234853	130236025	protein_coding	Mcm6	exon	ENSMUSG00000026355	ProperStrand	69	chr10	23505150	23505218	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.0487
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	NonProperStrand	14	chrX	34622906	34622992	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	NonProperStrand	26	1	-17.8919
chr3	107991704	107991720	protein_coding	Amigo1	utr3	ENSMUSG00000050947	ProperStrand	22	chr6	71796314	71796344	protein_coding	Immt	exon	ENSMUSG00000052337	ProperStrand	48	1	-15.7741
chr13	101545662	101545679	protein_coding	Cenph	exon	ENSMUSG00000045273	ProperStrand	5	chr8	129468745	129468799	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-9.4893
chr19	25395101	25395120	protein_coding	Kank1	intron	ENSMUSG00000032702	ProperStrand	218	chr2	84530865	84531297	protein_coding	Zdhhc5	exon	ENSMUSG00000034075	NonProperStrand	144	1	-8.9715
chr2	170200171	170200188	antisense	1700040N02Rik	.	ENSMUSG00000086999	ProperStrand	25	chrX	148031968	148032011	protein_coding	Phf8	exon	ENSMUSG00000041229	ProperStrand	17	1	-17.6183
chr17	15540300	15540351	protein_coding	Fam120b	intron	ENSMUSG00000014763	ProperStrand	5	chr7	116664795	116664885	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-17.8383
chr2	126639101	126639117	protein_coding	Trpm7	exon	ENSMUSG00000027365	ProperStrand	34	chr17	35088957	35089027	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	2	-11.2783
chr1	88252710	88252987	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chr14	31827517	31827547	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-1.5023
chr5	136578434	136578524	protein_coding	Rasa4	exon	ENSMUSG00000004952	ProperStrand	2	chr10	23505158	23505238	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-8.0476
chr16	72800514	72800532	protein_coding	Robo1	intron	ENSMUSG00000022883	NonProperStrand	188	chr1	9932550	9932626	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-5.4765
chr15	12522211	12522262	protein_coding	Pdzd2	exon	ENSMUSG00000022197	ProperStrand	21	chr3	153573528	153573565	snoRNA	ENSMUSG00000064731_Snord45b	.	ENSMUSG00000064731	ProperStrand	205	2	-22.3943
chr8	124321733	124321765	protein_coding	Klhdc4	exon	ENSMUSG00000040263	ProperStrand	13	chr11	69481333	69481378	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-6.1585
chr11	48504772	48504789	LTR	RMER17B	ERVK	chr11RMER17B48504520	ProperStrand	1	chr16	56035868	56035918	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	1	-inf
chr16	38089975	38089992	protein_coding	Gsk3b	utr5	ENSMUSG00000022812	ProperStrand	80	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-8.3507
chr2	77024926	77024946	protein_coding	Sestd1	utr3	ENSMUSG00000042272	NonProperStrand	10	chr9	15118322	15118342	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-6.9876
chr14	55027686	55027702	protein_coding	Slc7a7	exon	ENSMUSG00000000958	ProperStrand	44	chr11	69481335	69481384	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.7716
chr6	124867655	124867671	protein_coding	A230083G16Rik	intron	ENSMUSG00000055818	ProperStrand	1	chr16	23110909	23110963	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr8	89870639	89870656	LINE	L1MA9	L1	chr8L1MA989870391	ProperStrand	3	chr7	29136555	29136598	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-8.4253
chr16	91227718	91227735	protein_coding	Olig2	utr3	ENSMUSG00000039830	NonProperStrand	78	chr1	90123798	90124639	protein_coding	Heatr7b1	utr5	ENSMUSG00000079429	ProperStrand	147	2	-17.2489
chr3	88550856	88550872	protein_coding	Syt11	utr3	ENSMUSG00000068923	ProperStrand	7	chr2	26494803	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-7.3461
chr6	117873743	117873795	protein_coding	Hnrnpf	utr5	ENSMUSG00000042079	ProperStrand	147	chr1	88252837	88252901	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	4	-15.2190
chr5	130321505	130321687	protein_coding	Cct6a	exon	ENSMUSG00000029447	ProperStrand	128	chr7	117166756	117166836	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-3.3912
chr17	46912482	46912503	protein_coding	Rpl7l1	utr3	ENSMUSG00000063888	ProperStrand	37	chr12	112779242	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	2	-9.3507
chr2	24825186	24827046	protein_coding	Wdr85	exon	ENSMUSG00000026975	ProperStrand	323	chr1	63225255	63225312	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	1	-5.5059
chr9	57253860	57253877	SINE	B1_Mm	Alu	chr9B1_Mm57253847	ProperStrand	39	chr4	131865855	131865920	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.4732
chr8	73202288	73202341	protein_coding	Lsm4	exon	ENSMUSG00000031848	ProperStrand	19	chr6	30908232	30908249	protein_coding	Klf14	exon	ENSMUSG00000073209	NonProperStrand	12	1	-19.6418
chr11	4604178	4604205	protein_coding	Uqcr10	exon	ENSMUSG00000059534	ProperStrand	11	chr9	15119668	15119758	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-9.6817
chr4	15516780	15516870	LINE	L1_Mus2	L1	chr4L1_Mus215516294	ProperStrand	1	chr4	15516901	15516981	LINE	Lx	L1	chr4Lx15516920	NonProperStrand	1	1	-inf
chr19	8963086	8963128	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	chr14	31829399	31829434	snoRNA	ENSMUSG00000077797_Snord19	.	ENSMUSG00000077797	ProperStrand	62	1	-2.2203
chr8	64017611	64028376	protein_coding	Palld	exon	ENSMUSG00000058056	NonProperStrand	125	chr17	39985662	39985762	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-4.5092
chr6	124653826	124653926	protein_coding	Lpcat3	utr3	ENSMUSG00000004270	ProperStrand	19	chr5	13364489	13364511	protein_coding	Sema3a	intron	ENSMUSG00000028883	NonProperStrand	10	1	-18.8818
chrX	152009278	152009294	protein_coding	Ptchd1	exon	ENSMUSG00000041552	NonProperStrand	294	chr7	118219692	118219740	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-1.4452
chr5	65844429	65844486	protein_coding	1110003E01Rik	exon	ENSMUSG00000037822	ProperStrand	10	chr10	110918592	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-6.9682
chr8	86186997	86188449	protein_coding	Gipc1	exon	ENSMUSG00000019433	ProperStrand	60	chr4	131908251	131908414	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-2.6858
chr10	80291494	80291658	protein_coding	Oaz1	exon	ENSMUSG00000035242	ProperStrand	49	chr7	117189980	117190060	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.7058
chrX	138147584	138147600	protein_coding	Irs4	utr3	ENSMUSG00000054667	ProperStrand	24	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-5.3491
chr2	31850101	31850121	protein_coding	Nup214	exon	ENSMUSG00000001855	ProperStrand	62	chr2	144087332	144087380	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-6.4806
chr6	38577350	38577366	protein_coding	Klrg2	utr3	ENSMUSG00000071537	NonProperStrand	37	chr16	23110526	23110557	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.3186
chr4	104708470	104708543	protein_coding	Prkaa2	utr3	ENSMUSG00000028518	ProperStrand	12	chr7	29136548	29136648	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.3856
chr9	15069885	15069901	protein_coding	Med17	exon	ENSMUSG00000031935	ProperStrand	135	chr2	144087331	144087463	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	2	-8.1729
chr13	55632048	55632597	protein_coding	Ddx41	exon	ENSMUSG00000021494	ProperStrand	45	chr19	8800110	8800152	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-8.1837
chr15	85054806	85057459	protein_coding	Fbln1	exon	ENSMUSG00000006369	ProperStrand	32	chr7	17396940	17397030	protein_coding	Fkrp	exon	ENSMUSG00000048920	ProperStrand	3	1	-inf
chr11	67466373	67473554	protein_coding	Gas7	exon	ENSMUSG00000033066	ProperStrand	9	chr2	158182155	158182192	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-8.8292
chr2	26493391	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr3	85310713	85310734	protein_coding	Arfip1	intron	ENSMUSG00000074513	NonProperStrand	56	1	-6.3309
chrX	56451638	56451661	protein_coding	Fgf13	intron	ENSMUSG00000031137	NonProperStrand	10	chr11	97643000	97643090	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-5.8808
chr1	14842095	14842116	LINE	L1_Mus1	L1	chr1L1_Mus114838671	ProperStrand	1	chr2	145077957	145209255	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-inf
chr4	96412508	96412526	protein_coding	Gm12695	intron	ENSMUSG00000078639	ProperStrand	110	chr5	115939535	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-6.6610
chr11	82256916	82256932	protein_coding	Tmem132e	exon	ENSMUSG00000020701	ProperStrand	21	chr1	162965529	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.2774
chr3	30708796	30708885	protein_coding	Sec62	exon	ENSMUSG00000027706	ProperStrand	12	chr1	162965539	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-6.4045
chr9	108230055	108233222	protein_coding	Rhoa	exon	ENSMUSG00000007815	ProperStrand	45	chr12	106269284	106269384	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-4.6898
chr12	88458385	88458937	protein_coding	Pomt2	exon	ENSMUSG00000034126	ProperStrand	15	chr17	24856641	24856731	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-9.2228
chr1	71077182	71077272	protein_coding	Bard1	exon	ENSMUSG00000026196	ProperStrand	44	chr16	23110454	23110523	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.0046
chr16	57136918	57138174	protein_coding	Tomm70a	exon	ENSMUSG00000022752	ProperStrand	82	chr7	36474534	36474550	protein_coding	Dpy19l3	utr3	ENSMUSG00000043671	NonProperStrand	7	1	-17.1163
chr17	73191087	73191103	protein_coding	Ypel5	intron	ENSMUSG00000039770	ProperStrand	5	chr8	73419725	73419758	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-8.1065
chr7	3155921	3155957	protein_coding	AU018091	utr3	ENSMUSG00000054753	ProperStrand	42	chr4	131908236	131908277	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-3.5738
chr5	124573980	124574080	protein_coding	Pitpnm2	exon	ENSMUSG00000029406	ProperStrand	12	chr11	97642951	97643009	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-9.1277
chr15	12407819	12407840	protein_coding	Pdzd2	intron	ENSMUSG00000022197	ProperStrand	21	chr19	10059113	10059155	protein_coding	Fth1	exon	ENSMUSG00000024661	ProperStrand	75	1	-14.9945
chr5	29317812	29317829	LINE	Lx7	L1	chr5Lx729317715	ProperStrand	19	chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	1	-10.1190
chr7	139791517	139791533	protein_coding	Fgfr2	intron	ENSMUSG00000030849	ProperStrand	100	chr16	23111745	23111789	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.1554
chr17	4579728	4579747	SINE	B4A	B4	chr17B4A4579498	ProperStrand	1	chr8	13416897	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-inf
chr2	90235290	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	66980761	66980778	LTR	RMER19B	ERVK	chr2RMER19B66980263	ProperStrand	35	2	-9.0354
chr11	6319266	6319515	protein_coding	Ppia	exon	ENSMUSG00000071866	ProperStrand	127	chr7	117166744	117166844	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-3.4055
chr9	120038466	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	chr9	64024951	64025002	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	7	-4.8352
chr19	39349075	39349092	pseudogene	Cyp2c53-ps	.	ENSMUSG00000093610	ProperStrand	2	chr1	89681129	89681177	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-12.8594
chr14	76245258	76246015	protein_coding	Tpt1	exon	ENSMUSG00000060126	ProperStrand	236	chr2	130101988	130102078	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-2.7988
chr11	32287933	32287949	protein_coding	Sh3pxd2b	exon	ENSMUSG00000040711	NonProperStrand	13	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-12.0405
chr8	86186199	86186982	protein_coding	Gipc1	exon	ENSMUSG00000019433	NonProperStrand	1	chr13	110743183	110743199	protein_coding	Pde4d	utr3	ENSMUSG00000021699	NonProperStrand	36	1	-inf
chr4	155500564	155500664	protein_coding	9430015G10Rik	utr3	ENSMUSG00000059939	ProperStrand	17	chr11	69483136	69483189	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.7874
chr14	25673634	25673651	DNA	MER63D	AcHobo	chr14MER63D25673510	NonProperStrand	65	chr7	29136555	29136587	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.2309
chr2	43110993	43111010	LINE	Lx6	L1	chr2Lx643110257	ProperStrand	35	chr10	90432660	90432676	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	1	-11.7067
chr3	37364711	37364811	protein_coding	Spata5	intron	ENSMUSG00000027722	ProperStrand	13	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.3283
chr17	46814084	46814100	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr13	19684241	19684257	protein_coding	Epdr1	utr3	ENSMUSG00000002808	ProperStrand	46	1	-9.7651
chr3	55987229	55987247	protein_coding	Nbea	utr5	ENSMUSG00000027799	NonProperStrand	115	chr18	63868474	63868492	protein_coding	Wdr7	utr5	ENSMUSG00000040560	NonProperStrand	180	1	-9.8034
chr13	101511173	101514496	protein_coding	Mrps36	exon	ENSMUSG00000061474	ProperStrand	5	chr2	26493364	26493450	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-8.7753
chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	chr9	78326929	78326980	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-3.0702
chr11	96815591	96815691	protein_coding	Sp2	utr3	ENSMUSG00000018678	ProperStrand	11	chr7	29136603	29136627	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.5623
chr11	84971848	84971938	LTR	RMER15-int	ERVL	chr11RMER15-int84970961	ProperStrand	1	chr11	84972060	84972140	LTR	RMER15-int	ERVL	chr11RMER15-int84971941	ProperStrand	1	1	-inf
chr7	137690782	137690798	protein_coding	Nsmce4a	utr5	ENSMUSG00000040331	ProperStrand	14	chr19	8963052	8963081	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.9719
chr11	120148960	120148976	protein_coding	Bahcc1	exon	ENSMUSG00000039741	NonProperStrand	268	chr2	30159806	30159842	protein_coding	Nup188	exon	ENSMUSG00000052533	ProperStrand	96	1	-9.3701
chr4	87774931	87800615	protein_coding	BC057079	exon	ENSMUSG00000038368	ProperStrand	52	chr8	73419657	73419729	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-8.4990
chr5	8403145	8403170	protein_coding	Dbf4	exon	ENSMUSG00000002297	ProperStrand	38	chr4	131908236	131908345	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-8.0856
chr4	148755350	148755440	protein_coding	Ube4b	exon	ENSMUSG00000028960	ProperStrand	66	chr11	69481345	69481425	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.0291
chr3	107474993	107476383	protein_coding	Ahcyl1	exon	ENSMUSG00000027893	ProperStrand	81	chr7	95266597	95266613	protein_coding	Grm5	intron	ENSMUSG00000049583	NonProperStrand	145	1	-10.9388
chr12	5306300	5306318	protein_coding	Klhl29	intron	ENSMUSG00000020627	ProperStrand	9	chr7	52382755	52382832	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-10.6190
chr9	41877619	41877637	protein_coding	Sorl1	intron	ENSMUSG00000049313	NonProperStrand	10	chr15	79908934	79908956	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-9.0919
chr7	148645291	148645343	protein_coding	Pnpla2	exon	ENSMUSG00000025509	ProperStrand	13	chr2	24825186	24827046	protein_coding	Wdr85	exon	ENSMUSG00000026975	ProperStrand	323	1	-13.0597
chr13	97050603	97050620	SINE	B4A	B4	chr13B4A97050317	ProperStrand	12	chr6	4592564	4592599	protein_coding	Casd1	utr3	ENSMUSG00000015189	ProperStrand	2	1	-inf
chr1	72272889	72272935	snRNA	ENSMUSG00000075752_U2	.	ENSMUSG00000075752	ProperStrand	535	chr1	39605591	39605695	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	2	-5.3919
chr11	120679873	120680060	protein_coding	Fasn	exon	ENSMUSG00000025153	ProperStrand	298	chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	1	-4.9558
chr9	118584070	118584102	protein_coding	Itga9	intron	ENSMUSG00000039115	ProperStrand	27	chr11	62418014	62418087	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	NonProperStrand	7	1	-inf
chr5	143665202	143665223	protein_coding	Actb	utr3	ENSMUSG00000029580	ProperStrand	446	chr5	121655101	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-1.3574
chr6	4705023	4705058	protein_coding	Peg10	exon	ENSMUSG00000092035	ProperStrand	102	chr3	95980361	95980410	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-5.8111
chr5	136707644	136707662	protein_coding	Sh2b2	exon	ENSMUSG00000005057	NonProperStrand	101	chr4	133628939	133628955	protein_coding	Aim1l	exon	ENSMUSG00000012123	ProperStrand	32	2	-20.6502
chr2	180723688	180723705	protein_coding	Col20a1	intron	ENSMUSG00000016356	NonProperStrand	2	chr1	162967490	162967511	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-10.7784
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr14	31989693	31989761	protein_coding	Nisch	exon	ENSMUSG00000021910	ProperStrand	125	1	-3.1001
chr12	114290175	114290191	protein_coding	Pacs2	intron	ENSMUSG00000021143	NonProperStrand	302	chr10	17443077	17443096	protein_coding	Cited2	utr5	ENSMUSG00000039910	ProperStrand	64	1	-9.9448
chr19	5104985	5105085	protein_coding	Rab1b	intron	ENSMUSG00000024870	ProperStrand	133	chr15	79913288	79913346	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.1924
chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr8	125417454	125417500	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	1	-2.9496
chr11	54923160	54923189	protein_coding	Gm2a	utr3	ENSMUSG00000000594	ProperStrand	10	chr18	35714256	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-6.9619
chr9	88419023	88419041	SINE	B4	B4	chr9B488418988	ProperStrand	75	chr1	20552542	20552558	protein_coding	Pkhd1	exon	ENSMUSG00000043760	NonProperStrand	49	1	-13.2753
chr12	3871566	3871605	protein_coding	Dnmt3a	intron	ENSMUSG00000020661	ProperStrand	40	chr18	74938039	74938139	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	ProperStrand	1022	1	-8.4608
chr9	78023112	78023164	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr13	56229717	56236749	protein_coding	H2afy	utr5	ENSMUSG00000015937	ProperStrand	103	12	-19.7968
chr10	68813325	68813415	protein_coding	Cdk1	intron	ENSMUSG00000019942	ProperStrand	42	chr19	8800387	8800467	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-4.1983
chr2	24825186	24827046	protein_coding	Wdr85	exon	ENSMUSG00000026975	ProperStrand	323	chr11	62416578	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-2.1025
chr13	81923708	81923750	protein_coding	Cetn3	exon	ENSMUSG00000021537	ProperStrand	9	chr16	23111480	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.5836
chr4	57217783	57217883	protein_coding	Ptpn3	exon	ENSMUSG00000038764	ProperStrand	48	chr9	15130707	15130779	snoRNA	ENSMUSG00000077506_Scarna9	.	ENSMUSG00000077506	ProperStrand	148	2	-18.0988
chr18	23659849	23659869	protein_coding	Dtna	intron	ENSMUSG00000024302	ProperStrand	6	chr7	29136578	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-11.3005
chr7	133690447	133695528	protein_coding	Eif3c	utr3	ENSMUSG00000030738	ProperStrand	92	chr7	116664792	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	4	-7.1817
chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	chr5	111121151	111121199	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-2.4537
chr2	35563175	35563265	protein_coding	Dab2ip	utr5	ENSMUSG00000026883	ProperStrand	93	chr19	8800385	8800465	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-2.7423
chrX	71589885	71589907	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr19	8963027	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	7	-5.2056
chr11	116535917	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr14	52703794	52703884	protein_coding	Hnrnpc	exon	ENSMUSG00000060373	ProperStrand	75	4	-16.7614
chr3	69120975	69121029	protein_coding	Ppm1l	utr5	ENSMUSG00000027784	ProperStrand	32	chr5	115983444	115983460	protein_coding	Pxn	intron	ENSMUSG00000029528	ProperStrand	171	1	-12.4814
chr12	110881094	110881115	lincRNA	Rian	intron	ENSMUSG00000091793	ProperStrand	612	chr8	113366286	113366354	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	2	-7.6327
chr14	47930694	47930714	protein_coding	Mapk1ip1l	exon	ENSMUSG00000021840	ProperStrand	34	chr15	98350181	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-5.8700
chr9	120039532	120039683	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	chr7	29136524	29136655	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	112	-6.9408
chr7	117189864	117189939	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr17	26360446	26360536	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	1	-3.0954
chr1	132597437	132597455	protein_coding	Pfkfb2	exon	ENSMUSG00000026409	ProperStrand	8	chr15	98693919	98694022	protein_coding	Mll2	exon	ENSMUSG00000048154	ProperStrand	170	1	-15.3677
chr2	85037473	85037586	antisense	Gm13716	.	ENSMUSG00000086905	NonProperStrand	1	chr18	35716847	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-inf
chr6	142449919	142453940	protein_coding	Ldhb	exon	ENSMUSG00000030246	ProperStrand	224	chr19	8800457	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	3	-4.0042
chr17	67473840	67473859	protein_coding	Ptprm	intron	ENSMUSG00000033278	ProperStrand	20	chr1	162965979	162965999	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-5.7229
chr2	4814384	4817823	protein_coding	Sephs1	exon	ENSMUSG00000026662	ProperStrand	20	chr5	108334199	108334279	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-6.9926
chr9	78326583	78326652	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr16	34357476	34360911	protein_coding	Kalrn	exon	ENSMUSG00000061751	NonProperStrand	52	1	-6.6177
chr14	67606605	67607981	protein_coding	Bnip3l	exon	ENSMUSG00000022051	ProperStrand	30	chr19	8963082	8963204	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.5028
chr3	119486285	119486302	protein_coding	Ptbp2	utr5	ENSMUSG00000028134	ProperStrand	3	chr17	35299530	35299620	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-11.0713
chr11	69486723	69486784	protein_coding	Senp3	utr3	ENSMUSG00000005204	ProperStrand	65	chr4	116827121	116827159	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	2	-11.0865
chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-6.5343
chr17	35141830	35142003	protein_coding	Vars	exon	ENSMUSG00000007029	ProperStrand	121	chr7	117166761	117166841	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-3.4939
chr7	30837780	30837860	SINE	B2_Mm1a	B2	chr7B2_Mm1a30837789	ProperStrand	1	chr8	13083215	13083305	protein_coding	Pcid2	intron	ENSMUSG00000038542	ProperStrand	13	1	-inf
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr10	110918638	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-1.1018
chr13	3564119	3564301	protein_coding	Gdi2	exon	ENSMUSG00000021218	ProperStrand	49	chr19	10057309	10057383	protein_coding	Fth1	utr5	ENSMUSG00000024661	ProperStrand	75	1	-13.2753
chr6	124691242	124691302	protein_coding	Grcc10	utr5	ENSMUSG00000072772	ProperStrand	88	chr14	33005112	33005139	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-3.2853
chr5	130295413	130295495	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	chr8	129468745	129468836	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	12	-1.7697
chr8	73928249	73928268	protein_coding	5430437P03Rik	exon	ENSMUSG00000031820	ProperStrand	11	chr11	60370927	60370943	protein_coding	Alkbh5	utr3	ENSMUSG00000042650	ProperStrand	203	1	-14.3329
chr4	57921734	57921752	protein_coding	D630039A03Rik	utr3	ENSMUSG00000052117	NonProperStrand	10	chr8	98269959	98270096	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	4	-inf
chr10	72437415	72437431	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr8	23972955	23973028	protein_coding	Myst3	exon	ENSMUSG00000031540	ProperStrand	111	2	-11.3929
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr12	114029127	114029153	protein_coding	Ahnak2	intron	ENSMUSG00000072812	ProperStrand	11	1	-8.3583
chr2	90235297	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	26451868	26451884	protein_coding	Gm20532	intron	ENSMUSG00000092356	ProperStrand	46	1	-4.9744
chr6	112689098	112689322	protein_coding	Srgap3	exon	ENSMUSG00000030257	NonProperStrand	208	chr2	26493383	26493471	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-2.9934
chr4	141587766	141587782	protein_coding	Tmem51	exon	ENSMUSG00000040616	NonProperStrand	2	chr7	147129800	147129886	protein_coding	Utf1	utr5	ENSMUSG00000047751	ProperStrand	67	1	-20.5851
chr11	53146608	53146626	protein_coding	Zcchc10	utr3	ENSMUSG00000018239	NonProperStrand	10	chr5	108336363	108336418	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-8.4814
chr11	101327241	101327341	protein_coding	Vat1	exon	ENSMUSG00000034993	ProperStrand	69	chr2	26493366	26493420	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-3.4840
chr13	103895241	103895257	protein_coding	Mast4	intron	ENSMUSG00000034751	ProperStrand	150	chr5	121655016	121655096	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.1331
chr2	26766780	26766843	snoRNA	ENSMUSG00000065258_SNORD24	.	ENSMUSG00000065258	ProperStrand	130	chr15	5068462	5068480	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-4.5656
chrX	71589885	71589908	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr5	121655017	121655127	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-2.2209
chr10	84085316	84085332	protein_coding	Polr3b	intron	ENSMUSG00000034453	ProperStrand	41	chr11	98878390	98878456	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-7.0409
chr17	41097719	41097787	protein_coding	Mut	utr3	ENSMUSG00000023921	ProperStrand	20	chr3	123210904	123210958	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-4.0323
chr9	14356076	14356094	protein_coding	Amotl1	exon	ENSMUSG00000013076	ProperStrand	72	chr17	24665444	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-4.5898
chr1	88247835	88247876	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	chr1	187066789	187066879	snoRNA	ENSMUSG00000077571_Snora36b	.	ENSMUSG00000077571	ProperStrand	244	4	-8.9802
chr12	58331575	58339396	protein_coding	Prps1l3	utr5	ENSMUSG00000079104	ProperStrand	10	chrX	34622906	34622976	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	3	-15.5522
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr2	179322378	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	1	-6.5239
chr7	134746735	134746775	protein_coding	Rnf40	utr3	ENSMUSG00000030816	ProperStrand	12	chr11	106874226	106874254	tRNA	tRNA945-ArgCCG	.	690862	ProperStrand	133	2	-20.1891
chr10	79589444	79589490	protein_coding	Stk11	exon	ENSMUSG00000003068	ProperStrand	24	chr1	162966007	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-8.8327
chr17	28122111	28122186	protein_coding	Anks1	exon	ENSMUSG00000024219	ProperStrand	32	chr1	162967528	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.6627
chr3	68811825	68811850	protein_coding	Smc4	intron	ENSMUSG00000034349	ProperStrand	21	chr8	73419673	73419743	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-5.1207
chr6	86731276	86731292	protein_coding	Anxa4	intron	ENSMUSG00000029994	ProperStrand	47	chr7	34895176	34901630	protein_coding	Wtip	exon	ENSMUSG00000036459	ProperStrand	19	1	-16.1828
chr7	108440949	108440967	protein_coding	Atg16l2	intron	ENSMUSG00000047767	ProperStrand	121	chr18	35716730	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.1220
chr12	112534737	112565215	protein_coding	Cdc42bpb	intron	ENSMUSG00000021279	ProperStrand	128	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-5.4385
chr11	98936477	98936494	protein_coding	Tns4	exon	ENSMUSG00000017607	NonProperStrand	4	chr14	33005139	33005232	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-9.5527
chr4	131457128	131457194	protein_coding	Srsf4	utr3	ENSMUSG00000028911	ProperStrand	101	chr3	123210852	123210952	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.2797
chr14	56159294	56159312	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	chr16	23111370	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-0.7956
chr12	111930913	111932437	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr17	13112468	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	2	-1.2184
chr15	84030273	84030786	protein_coding	Samm50	exon	ENSMUSG00000022437	ProperStrand	51	chr11	77995191	77995243	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-6.5042
chr11	14047507	14047524	lincRNA	4930554G24Rik	exon	ENSMUSG00000085452	ProperStrand	23	chr16	23111704	23111738	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.5778
chr9	62644613	62644651	protein_coding	Fem1b	exon	ENSMUSG00000032244	ProperStrand	111	chr5	121655033	121655123	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.6397
chr13	55756419	55760402	protein_coding	Ddx46	exon	ENSMUSG00000021500	ProperStrand	87	chr17	80600122	80600169	protein_coding	Srsf7	utr3	ENSMUSG00000024097	ProperStrand	31	1	-13.8964
chr17	36097663	36097764	protein_coding	Abcf1	exon	ENSMUSG00000038762	ProperStrand	206	chr4	131865854	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-0.7529
chr9	114299275	114299399	protein_coding	Crtap	exon	ENSMUSG00000032431	ProperStrand	15	chr12	112779257	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-7.5327
chr15	102493434	102493463	protein_coding	Atp5g2	utr3	ENSMUSG00000062683	ProperStrand	32	chr10	110918616	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-4.6358
chr2	163457892	163457957	protein_coding	Serinc3	exon	ENSMUSG00000017707	ProperStrand	28	chr1	162965981	162965999	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-5.0576
chr4	140277549	140277649	protein_coding	Rcc2	utr3	ENSMUSG00000040945	ProperStrand	228	chr11	61521103	61521119	protein_coding	Slc5a10	intron	ENSMUSG00000042371	ProperStrand	11	7	-20.1394
chr5	118349845	118349879	protein_coding	Nos1	intron	ENSMUSG00000029361	NonProperStrand	237	chr15	79913288	79913353	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	4	-5.5763
chr6	119887565	119987103	protein_coding	Wnk1	exon	ENSMUSG00000045962	ProperStrand	221	chr16	23111690	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-2.2118
chr17	23955821	23955839	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	chr1	182603104	182603122	protein_coding	Lin9	intron	ENSMUSG00000058729	ProperStrand	7	1	-15.9094
chr11	43994292	43994312	LINE	L1M4	L1	chr11L1M443994217	ProperStrand	2	chr17	24856626	24856687	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	2	-inf
chr9	83471154	83471193	protein_coding	Sh3bgrl2	exon	ENSMUSG00000032261	ProperStrand	21	chr19	8963137	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.1775
chr2	164732935	164732951	protein_coding	Zfp335	exon	ENSMUSG00000039834	ProperStrand	42	chr9	120037898	120037951	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-5.3984
chr2	158184092	158184167	snoRNA	ENSMUSG00000064995_SNORA71	.	ENSMUSG00000064995	ProperStrand	430	chr11	77996586	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-2.4169
chr13	99080109	99083183	protein_coding	Btf3	exon	ENSMUSG00000021660	ProperStrand	64	chr17	24665465	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	2	-7.9668
chr11	45886087	45886161	protein_coding	Adam19	intron	ENSMUSG00000011256	ProperStrand	134	chr11	106362674	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-5.8172
chr3	8666738	8666756	protein_coding	Hey1	intron	ENSMUSG00000040289	ProperStrand	26	chr4	131865868	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.1929
chr4	141706946	141710369	protein_coding	Kazn	exon	ENSMUSG00000040606	ProperStrand	123	chr2	130101986	130102085	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-3.9822
chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	chr7	52382752	52382830	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-2.7304
chr12	105940648	105990175	protein_coding	Dicer1	exon	ENSMUSG00000041415	ProperStrand	61	chr15	79913288	79913346	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-6.0549
chr5	67068209	67068226	protein_coding	Uchl1	exon	ENSMUSG00000029223	ProperStrand	29	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-7.2878
chr18	53405321	53405337	protein_coding	Snx24	utr5	ENSMUSG00000024535	NonProperStrand	14	chr5	121655014	121655088	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-6.5960
chr2	181322945	181322995	protein_coding	Znf512b	exon	ENSMUSG00000000823	ProperStrand	17	chr15	98864956	98867493	protein_coding	Tuba1c	exon	ENSMUSG00000043091	ProperStrand	28	1	-17.3745
chr17	45705476	45705861	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr15	93295656	93319471	protein_coding	Pphln1	exon	ENSMUSG00000036167	ProperStrand	20	1	-8.9395
chr16	48502427	48502481	protein_coding	Morc1	exon	ENSMUSG00000022652	ProperStrand	28	chr10	127147256	127147273	protein_coding	Myo1a	exon	ENSMUSG00000025401	ProperStrand	93	2	-21.1461
chr16	91818789	91818806	protein_coding	Atp5o	intron	ENSMUSG00000022956	ProperStrand	37	chr11	55296286	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-7.1406
chr8	13416897	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr14	72961399	72961517	protein_coding	Fndc3a	exon	ENSMUSG00000033487	ProperStrand	84	1	-5.7917
chr7	26481008	26481026	protein_coding	Tgfb1	intron	ENSMUSG00000002603	ProperStrand	17	chr14	76247737	76247788	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-6.6490
chr3	104667449	104667465	protein_coding	St7l	utr5	ENSMUSG00000045576	ProperStrand	19	chr2	91436276	91436336	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-9.8189
chr17	70947826	70947842	protein_coding	Dlgap1	intron	ENSMUSG00000003279	NonProperStrand	36	chr7	151810580	151810598	protein_coding	Ano1	intron	ENSMUSG00000031075	ProperStrand	6	1	-18.7555
chr2	157119950	157120991	protein_coding	Rpn2	exon	ENSMUSG00000027642	ProperStrand	363	chr19	8799583	8799601	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-3.3155
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	2	-5.4536
chr5	122017416	122017432	protein_coding	Aldh2	utr3	ENSMUSG00000029455	ProperStrand	108	chr5	135421458	135421558	protein_coding	Cldn4	utr3	ENSMUSG00000047501	ProperStrand	12	1	-15.4202
chr9	59627978	59628013	protein_coding	Myo9a	exon	ENSMUSG00000039585	ProperStrand	27	chr4	131865856	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-8.0155
chr11	116704532	116704550	protein_coding	Jmjd6	utr5	ENSMUSG00000056962	ProperStrand	92	chr11	6428067	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	4	-8.8426
chr7	25670563	25673321	protein_coding	Rps19	exon	ENSMUSG00000040952	ProperStrand	101	chr3	96023943	96024043	protein_coding	Hist2h2ab	exon	ENSMUSG00000063689	ProperStrand	2	1	-inf
chr15	103129460	103129499	protein_coding	Copz1	utr3	ENSMUSG00000060992	ProperStrand	45	chr1	162968445	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	5	-inf
chr6	149283952	149283969	protein_coding	2810474O19Rik	utr3	ENSMUSG00000032712	ProperStrand	70	chr17	35299510	35299642	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-4.4815
chr6	73225282	73225320	protein_coding	Suclg1	exon	ENSMUSG00000052738	ProperStrand	12	chr11	97641452	97641488	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	2	-17.5016
mmu-miR-1949	4	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr7	53324064	53324164	protein_coding	Nomo1	exon	ENSMUSG00000030835	ProperStrand	85	6	-19.1286
chr9	40613083	40613174	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr19	7346306	7346333	protein_coding	Rcor2	intron	ENSMUSG00000024968	ProperStrand	120	1	-6.7606
chr7	26599967	26600019	protein_coding	Cyp2s1	exon	ENSMUSG00000040703	ProperStrand	18	chr5	130300460	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	4	-15.2526
chr17	66274645	66274667	protein_coding	Twsg1	utr3	ENSMUSG00000024098	ProperStrand	22	chr12	110874223	110874290	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	3	-19.1360
chr4	131865389	131865503	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	chr7	51505506	51505591	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	11	-13.6776
chr18	73693121	73693148	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr8	125626953	125627004	snoRNA	ENSMUSG00000064450_Snord68	.	ENSMUSG00000064450	ProperStrand	181	2	-5.8332
chr5	114861410	114862178	protein_coding	Ube3b	exon	ENSMUSG00000029577	ProperStrand	26	chr16	23111374	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-6.8669
chr2	118963884	118963961	protein_coding	Rad51	intron	ENSMUSG00000027323	ProperStrand	10	chr4	131908689	131908708	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.3231
chr19	4615542	4615559	protein_coding	Lrfn4	utr5	ENSMUSG00000045045	ProperStrand	19	chr11	62416575	62416615	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-7.4528
chr3	99950697	99952079	protein_coding	Wdr3	exon	ENSMUSG00000033285	ProperStrand	30	chr4	116875155	116875249	snRNA	ENSMUSG00000070228_U5	.	ENSMUSG00000070228	ProperStrand	131	1	-13.1471
chr18	34794086	34794251	protein_coding	Cdc23	exon	ENSMUSG00000024370	ProperStrand	48	chr7	117189960	117190040	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.7442
chr3	89823214	89851771	protein_coding	Ubap2l	exon	ENSMUSG00000042520	ProperStrand	88	chr9	15119653	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-5.4853
chr15	76284776	76284969	protein_coding	Bop1	exon	ENSMUSG00000022557	ProperStrand	26	chr8	113362430	113362478	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	1	-10.9549
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr10	127931440	127931457	protein_coding	Myl6b	utr3	ENSMUSG00000039824	NonProperStrand	4	1	-11.5429
chr3	96654255	96654271	protein_coding	Pdzk1	exon	ENSMUSG00000038298	ProperStrand	101	chr9	15119968	15119994	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-6.2221
chr10	20080834	20080860	protein_coding	Fam54a	utr3	ENSMUSG00000019992	ProperStrand	232	chr5	121655052	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	3	-4.2758
chr3	126436336	126436353	protein_coding	Camk2d	intron	ENSMUSG00000053819	NonProperStrand	20	chr8	73419657	73419740	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-5.2171
chr10	66739684	66739762	protein_coding	Nrbf2	intron	ENSMUSG00000075000	ProperStrand	3	chr10	23505190	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-6.9610
chr1	8937401	8937475	protein_coding	Sntg1	intron	ENSMUSG00000025909	NonProperStrand	11	chr15	5068442	5068480	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-9.5003
chr15	102110890	102110906	protein_coding	Mfsd5	exon	ENSMUSG00000045665	NonProperStrand	3	chr11	6428118	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-9.3720
chrX	7308925	7308996	protein_coding	Ccdc120	utr3	ENSMUSG00000031150	ProperStrand	9	chr1	162967515	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-7.2161
chr7	13516159	13516204	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr6	52965701	52965718	protein_coding	Jazf1	intron	ENSMUSG00000063568	ProperStrand	43	1	-9.3359
chr14	56291905	56294178	protein_coding	Gmpr2	exon	ENSMUSG00000002326	NonProperStrand	1	chr9	120038518	120038588	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-inf
chr8	126088183	126088226	rRNA	n-R5s115	.	ENSMUSG00000075862	ProperStrand	31	chr12	92811904	92812014	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	1	-9.9015
chr7	48982043	48982060	processed_transcript	Vmn2r-ps54	.	ENSMUSG00000074164	NonProperStrand	19	chr16	23110874	23110940	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7016
chr17	56754487	56754696	protein_coding	Lonp1	exon	ENSMUSG00000041168	ProperStrand	83	chr4	131865868	131865958	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.2907
chr7	87650773	87650831	protein_coding	Blm	exon	ENSMUSG00000030528	ProperStrand	35	chr9	15119969	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	6	-22.0994
chr11	74336381	74336397	protein_coding	Rap1gap2	intron	ENSMUSG00000038807	NonProperStrand	7	chr9	64024466	64024525	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	1	-12.7849
chrX	148461231	148461275	protein_coding	Smc1a	exon	ENSMUSG00000041133	ProperStrand	104	chr11	97642988	97643078	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-4.5850
chr7	29603752	29603831	protein_coding	Hnrnpl	exon	ENSMUSG00000015165	ProperStrand	150	chr15	101754849	101754865	protein_coding	Krt4	exon	ENSMUSG00000059668	ProperStrand	45	1	-12.0544
chrX	7452429	7452469	protein_coding	Otud5	utr3	ENSMUSG00000031154	ProperStrand	79	chr1	162967496	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-2.9765
chr2	181325063	181325138	protein_coding	Znf512b	intron	ENSMUSG00000000823	ProperStrand	17	chr17	13115720	13115786	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	1	-10.0837
chr1	75197971	75198061	protein_coding-noncoding	Glb1l	utr3	ENSMUSG00000026200	ProperStrand	1	chr1	75197781	75197871	protein_coding	Glb1l	exon	ENSMUSG00000026200	ProperStrand	3	1	-inf
chr15	99329179	99329195	protein_coding	Faim2	utr3	ENSMUSG00000023011	ProperStrand	45	chr5	27676304	27676321	protein_coding	Dpp6	intron	ENSMUSG00000061576	ProperStrand	35	1	-14.9860
chr2	30168156	30168205	protein_coding	Nup188	exon	ENSMUSG00000052533	ProperStrand	96	chr16	23110550	23110584	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-3.1347
chr16	43888788	43888836	protein_coding	Qtrtd1	intron	ENSMUSG00000022704	ProperStrand	11	chr16	23111475	23111505	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-7.1274
chr9	118310743	118310787	Simple_repeat	(CATA)n	Simple_repeat	chr9(CATA)n118310733	NonProperStrand	1	chr8	114517538	114517574	protein_coding	Kars	exon	ENSMUSG00000031948	ProperStrand	89	1	-inf
chr5	136385751	136410418	protein_coding	Ywhag	utr3	ENSMUSG00000051391	ProperStrand	142	chr3	123210854	123210910	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-1.7139
chr12	77371290	77371306	protein_coding	Mthfd1	intron	ENSMUSG00000021048	ProperStrand	71	chr19	8800356	8800446	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-3.2224
chr2	38781800	38781843	protein_coding	Nr6a1	utr5	ENSMUSG00000063972	ProperStrand	52	chr16	32243848	32243889	snoRNA	ENSMUSG00000080440_SNORA79	.	ENSMUSG00000080440	ProperStrand	140	2	-18.0982
chr2	90235294	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr12	58331566	58331582	protein_coding	Mipol1	utr5	ENSMUSG00000047022	ProperStrand	40	1	-5.2466
chr4	11849262	11849281	LINE	Lx8	L1	chr4Lx811849111	NonProperStrand	12	chr16	23110828	23110886	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-4.4633
chr12	87861116	87861173	protein_coding	Esrrb	utr3	ENSMUSG00000021255	ProperStrand	254	chr3	123210855	123210889	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-1.3259
chr2	125073166	125073185	protein_coding	Dut	intron	ENSMUSG00000027203	ProperStrand	18	chr8	73419683	73419783	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-5.4264
chr10	80674669	80675224	protein_coding	Atcay	exon	ENSMUSG00000034958	ProperStrand	94	chr15	79908970	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-4.6042
chr2	22444871	22444912	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	chr3	153573528	153573589	snoRNA	ENSMUSG00000064731_Snord45b	.	ENSMUSG00000064731	ProperStrand	205	1	-5.3544
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr11	77994960	77995060	protein_coding	Rpl23a	exon	ENSMUSG00000058546	ProperStrand	121	1	-7.5044
chr12	112779147	112779251	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	chr12	92811869	92811906	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	1	-0.8433
chr12	107873459	107873475	SINE	B4A	B4	chr12B4A107873347	NonProperStrand	1	chr1	154947624	154947642	protein_coding	Nmnat2	intron	ENSMUSG00000042751	ProperStrand	39	1	-inf
chr5	144267964	144268264	protein_coding	Rac1	exon	ENSMUSG00000001847	ProperStrand	32	chr7	29136555	29136645	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.4817
chr2	53050122	53050139	protein_coding	Prpf40a	exon	ENSMUSG00000061136	ProperStrand	129	chr16	23111742	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-0.8392
chr18	76401602	76401620	protein_coding	Smad2	utr5	ENSMUSG00000024563	NonProperStrand	4	chr16	23111690	23111716	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-7.1763
chr3	85945271	85945312	protein_coding	Rps3a	exon	ENSMUSG00000028081	ProperStrand	177	chr4	131908688	131908748	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-1.5330
chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr12	106269281	106269557	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	51	-7.5567
chr11	54440164	54444718	protein_coding	Rapgef6	exon	ENSMUSG00000037533	ProperStrand	27	chr1	162968460	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-7.6715
chr6	113486979	113487019	protein_coding	Fancd2	exon	ENSMUSG00000034023	ProperStrand	65	chr10	127722453	127722469	protein_coding	Stat2	exon	ENSMUSG00000040033	NonProperStrand	14	1	-16.1335
chr7	25774981	25775479	protein_coding	Atp1a3	exon	ENSMUSG00000040907	ProperStrand	66	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-5.6807
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr7	116664794	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	13	-9.1221
chr2	90235287	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	3569056	3569073	protein_coding	Fam133b	exon	ENSMUSG00000058503	NonProperStrand	2	1	-11.8388
chr11	46088223	46090294	protein_coding	Cyfip2	exon	ENSMUSG00000020340	ProperStrand	28	chr4	131865855	131865958	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.0580
chr19	4742580	4744121	protein_coding	Spnb3	exon	ENSMUSG00000067889	ProperStrand	19	chr8	98270004	98270084	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-7.8369
chr19	45824895	45824960	protein_coding	Mgea5	utr3	ENSMUSG00000025220	ProperStrand	53	chr11	97642978	97643060	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.6858
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chrX	71589885	71589907	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	1	-3.3499
chr3	58269787	58269803	protein_coding	Tsc22d2	utr3	ENSMUSG00000027806	NonProperStrand	2	chr17	39985621	39985644	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-13.3651
chrX	70926509	70926585	protein_coding	Slc6a8	utr3	ENSMUSG00000019558	ProperStrand	47	chr16	23110894	23110984	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.1909
chr8	55606774	55606823	antisense	Spcs3	.	ENSMUSG00000054408	ProperStrand	30	chr11	69483136	69483202	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.6945
chr7	52381352	52381396	protein_coding	Rpl13a	exon	ENSMUSG00000074129	ProperStrand	269	chr5	74489642	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	3	-3.8455
chr4	140864541	140864641	protein_coding	Epha2	exon	ENSMUSG00000006445	ProperStrand	148	chr11	62418015	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	3	-9.3604
chr1	93855013	93855999	protein_coding	Hdac4	exon	ENSMUSG00000026313	ProperStrand	27	chr5	74489569	74489659	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-5.3118
chr3	67273394	67273450	protein_coding	Gfm1	exon	ENSMUSG00000027774	ProperStrand	31	chrX	71517821	71517905	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-7.8645
chr4	125855423	125855500	protein_coding	Thrap3	exon	ENSMUSG00000043962	ProperStrand	84	chr9	120039586	120039626	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.7182
chr3	105265054	105265072	protein_coding	Kcnd3	intron	ENSMUSG00000040896	NonProperStrand	44	chr11	106362636	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-8.0247
chr11	54824557	54824580	protein_coding	Anxa6	exon	ENSMUSG00000018340	ProperStrand	8	chr18	35716789	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-5.9895
chr5	145885041	145885131	protein_coding-noncoding	Arpc1b	utr5	ENSMUSG00000029622	NonProperStrand	1	chr5	145885587	145885667	protein_coding	Arpc1b	intron	ENSMUSG00000029622	NonProperStrand	3	1	-inf
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr2	146048947	146048963	protein_coding	Insm1	exon	ENSMUSG00000068154	NonProperStrand	3	1	-15.3187
chr19	41990328	41991211	protein_coding	Pgam1	exon	ENSMUSG00000011752	ProperStrand	124	chr1	155287320	155287355	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	1	-7.5301
chr6	82743694	82743774	SINE	ID_B1	B4	chr6ID_B182743557	NonProperStrand	1	chr6	82743856	82743946	SINE	RSINE1	B4	chr6RSINE182743795	NonProperStrand	1	1	-inf
chr11	69591153	69591213	protein_coding	Zbtb4	exon	ENSMUSG00000018750	ProperStrand	15	chr10	127521370	127521395	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	3	-inf
chr5	138220413	138220432	protein_coding	Ppp1r35	exon	ENSMUSG00000029725	ProperStrand	7	chr18	74938044	74938124	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	ProperStrand	1022	1	-12.0640
chr9	44143388	44143478	protein_coding	H2afx	utr3	ENSMUSG00000049932	ProperStrand	137	chr19	8963096	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.0441
chr16	57396568	57396586	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr8	32260352	32260422	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-1.9475
chr11	60255691	60255762	protein_coding	4933439F18Rik	utr3	ENSMUSG00000018415	ProperStrand	26	chrX	34622958	34622995	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	3	-11.3699
chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	chr4	131866154	131866182	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-0.8487
chr7	135915765	135915825	protein_coding	Sec23ip	exon	ENSMUSG00000055319	ProperStrand	27	chr16	23111374	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-9.2367
chr2	71272260	71276849	protein_coding	Hat1	exon	ENSMUSG00000027018	ProperStrand	53	chr7	13516178	13516205	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	2	-14.1483
chr7	4085331	4085475	lincRNA	D030047H15Rik	intron	ENSMUSG00000085886	ProperStrand	5	chr1	89673715	89673747	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-8.2536
chr3	97817680	97851652	protein_coding	Notch2	exon	ENSMUSG00000027878	ProperStrand	86	chr9	15119731	15119767	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.0263
chr2	13501819	13502271	protein_coding	Vim	exon	ENSMUSG00000026728	ProperStrand	33	chr1	162968218	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-8.0119
chr9	65435665	65435747	protein_coding	Pif1	exon	ENSMUSG00000041064	ProperStrand	14	chr1	44000375	44000416	protein_coding	Tpp2	intron	ENSMUSG00000041763	NonProperStrand	5	1	-20.6519
chr19	41990283	41991136	protein_coding	Pgam1	exon	ENSMUSG00000011752	ProperStrand	124	chr18	35714187	35714267	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-3.8872
chr9	56775853	56775870	protein_coding	Snx33	utr5	ENSMUSG00000032733	NonProperStrand	116	chr5	115939534	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-6.5562
chr8	72287172	72287188	protein_coding	Zfp866	utr3	ENSMUSG00000043090	NonProperStrand	134	chr1	162965560	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.9011
chr7	97323018	97324824	protein_coding	Picalm	exon	ENSMUSG00000039361	ProperStrand	23	chr11	69483136	69483211	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.1990
chr10	19886574	19886591	protein_coding	Mtap7	intron	ENSMUSG00000019996	NonProperStrand	16	chr10	23505259	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.4264
chr7	134343849	134346721	protein_coding	Tbc1d10b	exon	ENSMUSG00000042492	ProperStrand	187	chr15	79913288	79913344	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-1.6539
chr19	39042508	39042533	protein_coding	Hells	utr3	ENSMUSG00000025001	ProperStrand	23	chr10	110918551	110918641	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	6	-20.0563
chr15	79913288	79913305	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr3	107086617	107086672	protein_coding	Hbxip	utr3	ENSMUSG00000087260	ProperStrand	7	1	-7.8767
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr9	21823257	21823273	protein_coding	Elavl3	exon	ENSMUSG00000003410	NonProperStrand	137	2	-9.9868
chr11	4820972	4820990	protein_coding	Thoc5	intron	ENSMUSG00000034274	ProperStrand	325	chr2	63936035	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-4.5508
chr17	24856709	24856799	antisense	Snhg9	.	ENSMUSG00000090101	ProperStrand	218	chr18	35714208	35714288	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-1.3133
chr2	90235315	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr3	126436336	126436353	protein_coding	Camk2d	intron	ENSMUSG00000053819	NonProperStrand	20	1	-6.6233
chr4	133416124	133420981	protein_coding	Rps6ka1	exon	ENSMUSG00000003644	ProperStrand	68	chr16	23110898	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-2.8062
chr10	79359635	79360348	protein_coding	Med16	exon	ENSMUSG00000013833	ProperStrand	13	chr10	23505152	23505218	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.8218
chr10	76949710	76949729	protein_coding	1810008A18Rik	utr3	ENSMUSG00000032977	ProperStrand	8	chr1	87983864	87983973	snoRNA	ENSMUSG00000077274_SNORA26	.	ENSMUSG00000077274	ProperStrand	361	4	-21.3531
chr17	35647450	35647517	protein_coding	Pou5f1	utr3	ENSMUSG00000024406	ProperStrand	104	chr6	57638553	57638569	protein_coding	Pigy	utr3	ENSMUSG00000043162	NonProperStrand	18	2	-inf
chr19	5609827	5609844	protein_coding	Kat5	intron	ENSMUSG00000024926	ProperStrand	20	chr10	110918552	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	3	-13.0753
chr3	107133200	107133247	protein_coding	Rbm15	exon	ENSMUSG00000048109	ProperStrand	82	chr19	8963032	8963048	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-9.5285
chr7	35013187	35013277	protein_coding	Gpi1	intron	ENSMUSG00000036427	ProperStrand	288	chr7	117166763	117166843	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	2	-3.5965
chr14	13427774	13427791	protein_coding	Cadps	intron	ENSMUSG00000054423	NonProperStrand	28	chr15	79908931	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-6.9827
chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	chr1	162966189	162966224	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-3.4744
chr10	36713651	36716802	protein_coding	Hdac2	exon	ENSMUSG00000019777	ProperStrand	36	chr16	23110458	23110548	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.3689
chr13	69777563	69777653	LTR	ORR1B1-int	MaLR	chr13ORR1B1-int69777493	ProperStrand	2	chr17	24665419	24665499	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	2	-inf
chr5	124063863	124063953	protein_coding	Clip1	exon	ENSMUSG00000049550	ProperStrand	27	chr9	15119679	15119759	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.0899
chr1	47048131	47048221	LINE	L1Md_T	L1	chr1L1Md_T47048148	ProperStrand	1	chr1	85210172	85210252	pseudogene	Gm7609	.	ENSMUSG00000079457	ProperStrand	3	1	-inf
chr2	90235298	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	75782974	75782992	protein_coding	Large	intron	ENSMUSG00000004383	ProperStrand	48	1	-4.8919
chr17	31251275	31251299	protein_coding	Abcg1	utr3	ENSMUSG00000024030	ProperStrand	36	chr4	131865856	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-9.4307
chr13	85341959	85341977	protein_coding	Ccnh	exon	ENSMUSG00000021548	ProperStrand	2	chr8	113362449	113362512	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	1	-16.7645
chr10	79316213	79316230	lincRNA	E130317F20Rik	exon	ENSMUSG00000091994	NonProperStrand	97	chr4	131908299	131908357	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-3.9859
chr12	104296775	104296792	protein_coding	Unc79	intron	ENSMUSG00000021198	NonProperStrand	25	chr15	79908930	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-7.2107
chr1	82685775	82686571	protein_coding	Col4a3	exon	ENSMUSG00000079465	ProperStrand	99	chr8	113362433	113362454	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	1	-8.2633
chr17	35992057	35992125	protein_coding	Mdc1	exon	ENSMUSG00000061607	ProperStrand	85	chr7	117166789	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-4.1511
chr8	127317113	127317129	protein_coding	Trim67	utr5	ENSMUSG00000036913	ProperStrand	43	chr3	96363021	96363063	protein_coding	Txnip	exon	ENSMUSG00000038393	ProperStrand	172	1	-11.8724
chr6	120338059	120338076	protein_coding	Kdm5a	exon	ENSMUSG00000030180	ProperStrand	57	chr19	8963129	8963182	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-4.1949
chr5	120889875	120889892	protein_coding	Lhx5	intron	ENSMUSG00000029595	NonProperStrand	106	chr7	52382010	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-5.5921
chr3	121985313	121985385	protein_coding	Dnttip2	exon	ENSMUSG00000039756	ProperStrand	4	chr7	29136633	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-7.7378
chr16	4077700	4077790	protein_coding	Trap1	utr5	ENSMUSG00000005981	ProperStrand	25	chr4	131866163	131866243	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-5.3453
chr8	111305809	111305870	protein_coding	Zfhx3	intron	ENSMUSG00000038872	ProperStrand	65	chr11	69730622	69730660	protein_coding	Eif5a	utr3	ENSMUSG00000078812	ProperStrand	164	2	-17.5184
chr6	83111671	83111687	protein_coding	1700003E16Rik	exon	ENSMUSG00000030030	ProperStrand	352	chr11	62416600	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-1.9644
chr4	77957002	77957020	LINE	Lx6	L1	chr4Lx677956774	ProperStrand	16	chr8	87370689	87370743	protein_coding	Calr	utr5	ENSMUSG00000003814	ProperStrand	232	1	-13.2914
chr9	48805486	48805566	protein_coding	Usp28	intron	ENSMUSG00000032267	ProperStrand	63	chr12	106269445	106269535	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-4.0482
chr7	127844053	127844126	protein_coding	BC030336	intron	ENSMUSG00000046096	ProperStrand	2	chr5	130295415	130295505	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-12.6593
chr4	129662259	129695998	protein_coding	Bai2	utr5	ENSMUSG00000028782	ProperStrand	119	chr12	106269284	106269402	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	2	-4.9999
chr19	38869531	38869547	protein_coding	Noc3l	exon	ENSMUSG00000024999	NonProperStrand	149	chr5	121655127	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.1440
chr16	37777391	37777408	protein_coding	Fstl1	exon	ENSMUSG00000022816	ProperStrand	179	chr18	35716683	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	15	-19.8483
chr14	124026090	124026107	protein_coding	Nalcn	utr5	ENSMUSG00000000197	NonProperStrand	12	chr19	8963022	8963080	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.2811
chr11	95541071	95541126	protein_coding	Phb	exon	ENSMUSG00000038845	ProperStrand	126	chr10	110930609	110930652	protein_coding	Nap1l1	intron	ENSMUSG00000058799	ProperStrand	185	3	-21.1184
chr14	76247720	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	chr4	132394440	132394462	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	1	-0.8047
chr12	8758916	8758938	protein_coding	Pum2	utr3	ENSMUSG00000020594	ProperStrand	39	chr16	23110453	23110556	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.2225
chr3	153141981	153142001	protein_coding	St6galnac3	intron	ENSMUSG00000052544	ProperStrand	19	chr9	15119631	15119766	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.7702
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr9	34959828	34959937	protein_coding	Dcps	intron	ENSMUSG00000032040	ProperStrand	38	1	-12.2917
chr8	28147021	28147111	protein_coding	Erlin2	utr3	ENSMUSG00000031483	ProperStrand	14	chr14	52829480	52829560	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-11.1578
chr10	79324761	79325262	protein_coding	Ptbp1	exon	ENSMUSG00000006498	ProperStrand	129	chr10	86158687	86159472	protein_coding	Hsp90b1	exon	ENSMUSG00000020048	ProperStrand	396	1	-8.0030
chr11	98692695	98692720	protein_coding	Casc3	exon	ENSMUSG00000078676	ProperStrand	33	chr16	23111486	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-3.9154
chr15	86004024	86004041	protein_coding	Cerk	intron	ENSMUSG00000035891	NonProperStrand	9	chr17	27559700	27559717	protein_coding	Grm4	utr3	ENSMUSG00000063239	ProperStrand	147	1	-15.3992
chr11	97557632	97557677	protein_coding	Pcgf2	intron	ENSMUSG00000018537	ProperStrand	31	chr4	153376394	153376494	protein_coding	BC046331	exon	ENSMUSG00000039523	ProperStrand	6	1	-18.6658
chr1	53219102	53219119	protein_coding	1700019A02Rik	intron	ENSMUSG00000060715	ProperStrand	23	chr4	131865867	131865934	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.4190
chr2	42110519	42110537	protein_coding	Lrp1b	intron	ENSMUSG00000049252	NonProperStrand	39	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.4732
chr17	51877559	51877575	protein_coding	Satb1	utr3	ENSMUSG00000023927	ProperStrand	62	chr11	69483197	69483236	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.3941
chr17	24665420	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	chr10	39978331	39978423	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	10	-2.6936
chr6	109310121	109310201	LINE	L1Md_F2	L1	chr6L1Md_F2109307367	NonProperStrand	1	chr3	82725973	82726064	antisense	4930564K09Rik	.	ENSMUSG00000086273	NonProperStrand	2	1	-inf
chr16	57391761	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr17	24858210	24858592	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	1	-4.2252
chr11	100324888	100324957	protein_coding	Klhl11	exon	ENSMUSG00000048732	ProperStrand	8	chr16	23110909	23110999	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.2180
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr19	59047869	59047886	protein_coding	4930506M07Rik	utr3	ENSMUSG00000041362	NonProperStrand	21	1	-11.4949
chr5	74489202	74489324	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr11	25752343	25752360	protein_coding	5730522E02Rik	intron	ENSMUSG00000032985	NonProperStrand	20	1	-7.8145
chr9	43899940	43900198	protein_coding	Usp2	exon	ENSMUSG00000032010	ProperStrand	3	chr16	23110560	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-8.5395
chr17	6945883	6946745	protein_coding	Ezr	exon	ENSMUSG00000052397	ProperStrand	126	chr1	162968213	162968293	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-5.3588
chr2	31924012	31924028	protein_coding	Fam78a	utr3	ENSMUSG00000050592	NonProperStrand	340	chr4	131865381	131865456	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-1.1223
chr4	43013145	43013166	protein_coding	Vcp	utr5	ENSMUSG00000028452	ProperStrand	108	chr5	130300442	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.5648
chr2	157854273	157854289	protein_coding	Rprd1b	utr5	ENSMUSG00000027651	ProperStrand	33	chr7	149170855	149171339	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	1	-12.4552
chr17	72251793	72251815	protein_coding	Alk	intron	ENSMUSG00000055471	ProperStrand	21	chr19	8963086	8963165	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-12.2840
chr7	107249080	107249155	protein_coding	Pold3	exon	ENSMUSG00000030726	ProperStrand	14	chr18	33954828	33954918	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-6.3373
chr11	97795340	97799911	protein_coding	Plxdc1	exon	ENSMUSG00000017417	ProperStrand	20	chr3	54536072	54536116	protein_coding	Exosc8	exon	ENSMUSG00000027752	ProperStrand	8	1	-18.9291
chr8	37202456	37202472	protein_coding	D8Ertd82e	exon	ENSMUSG00000050271	NonProperStrand	3	chr10	110918602	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-9.6547
chrX	71199939	71200044	protein_coding	Hcfc1	exon	ENSMUSG00000031386	ProperStrand	424	chr19	8799603	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-3.0368
chr4	126116492	126116557	protein_coding	Eif2c1	utr3	ENSMUSG00000041530	ProperStrand	30	chr19	8963032	8963048	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-11.5562
chr4	82462757	82462787	protein_coding	Zdhhc21	intron	ENSMUSG00000028403	ProperStrand	5	chr7	150717353	150717425	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-10.6258
chr10	75998983	75999000	protein_coding	Lss	exon	ENSMUSG00000033105	ProperStrand	56	chr5	108336362	108336411	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-5.0144
chr10	79394614	79394632	protein_coding	Arid3a	exon	ENSMUSG00000019564	ProperStrand	16	chr16	11144177	11144277	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	2	-20.6135
chrX	20258320	20258522	protein_coding	Uba1	exon	ENSMUSG00000001924	ProperStrand	156	chr9	120039591	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.7016
chr6	131315411	131317860	protein_coding	Csda	utr3	ENSMUSG00000030189	ProperStrand	86	chr7	117189880	117189960	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.6904
chr13	95249692	95249754	protein_coding	Ap3b1	utr3	ENSMUSG00000021686	ProperStrand	96	chr8	129468801	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-3.5324
chr7	136748736	136749287	protein_coding	Wdr11	exon	ENSMUSG00000042055	ProperStrand	24	chr3	123210854	123210889	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.6860
chr8	49362039	49362129	protein_coding	Odz3	exon	ENSMUSG00000031561	ProperStrand	56	chr10	23505152	23505232	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.3287
chr5	44370698	44370788	protein_coding	Fgfbp1	exon	ENSMUSG00000048373	ProperStrand	1	chr19	8963044	8963124	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-inf
chr7	135260878	135260894	protein_coding	Itgam	utr3	ENSMUSG00000030786	NonProperStrand	2	chr16	11144153	11144278	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	1	-18.1559
chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	chr8	129115379	129115452	protein_coding	Irf2bp2	exon	ENSMUSG00000051495	ProperStrand	25	1	-11.6442
chr6	128388448	128388469	protein_coding	Fkbp4	exon	ENSMUSG00000030357	ProperStrand	114	chr4	96412508	96412526	protein_coding	Gm12695	intron	ENSMUSG00000078639	ProperStrand	110	1	-10.8067
chr1	55137104	55138012	protein_coding	Hspd1	exon	ENSMUSG00000025980	ProperStrand	140	chr16	23111733	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-1.5415
chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	chr18	35714144	35714234	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-3.6674
chr2	90235314	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	154500680	154500696	protein_coding	Morn1	intron	ENSMUSG00000029049	NonProperStrand	22	1	-6.4314
chr2	145076803	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	chr9	15120940	15121015	snoRNA	ENSMUSG00000065265_SNORA32	.	ENSMUSG00000065265	ProperStrand	101	1	-6.6887
chr11	118900007	118900026	protein_coding	Cbx8	exon	ENSMUSG00000025578	ProperStrand	95	chr3	68889053	68889147	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-2.4479
chr10	75399146	75400097	protein_coding	Chchd10	exon	ENSMUSG00000049422	ProperStrand	140	chrX	34622955	34623025	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-1.7421
chr11	120429340	120429513	protein_coding	P4hb	exon	ENSMUSG00000025130	ProperStrand	83	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-3.0026
chr14	31953025	31953118	protein_coding	Stab1	exon	ENSMUSG00000042286	NonProperStrand	127	chr9	15119631	15119660	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.4304
chr17	15883087	15883125	protein_coding	Chd1	intron	ENSMUSG00000023852	ProperStrand	82	chr12	16946851	16946929	snoRNA	ENSMUSG00000064620_SNORA32	.	ENSMUSG00000064620	ProperStrand	165	3	-19.7980
chr12	60476078	60476094	LTR	LTR16D	ERVL	chr12LTR16D60475969	NonProperStrand	17	chr5	121655100	121655154	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-6.2021
chr14	27199812	27199828	antisense	4933413J09Rik	.	ENSMUSG00000021874	ProperStrand	51	chr1	75544676	75544713	protein_coding	Slc4a3	exon	ENSMUSG00000006576	ProperStrand	5	1	-18.7776
chr6	90987689	90990620	protein_coding	Nup210	exon	ENSMUSG00000030091	ProperStrand	140	chr18	33954817	33954897	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-2.0320
chr13	15751932	15751960	protein_coding	Gli3	exon	ENSMUSG00000021318	ProperStrand	54	chr16	23111724	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-3.7410
chr3	137849424	137849440	protein_coding	4930579F01Rik	utr5	ENSMUSG00000012042	NonProperStrand	156	chr14	33005080	33005140	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-2.2862
chr9	61774879	61775163	protein_coding	Kif23	exon	ENSMUSG00000032254	ProperStrand	41	chr16	23110549	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.1317
chr2	17949197	17949213	protein_coding	A930004D18Rik	utr5	ENSMUSG00000054057	ProperStrand	17	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-8.3710
chr8	32837190	32837208	LINE	Lx3C	L1	chr8Lx3C32836913	ProperStrand	3	chr9	15119662	15119705	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-8.7352
chr15	78982035	78982051	protein_coding	Polr2f	exon	ENSMUSG00000033020	NonProperStrand	71	chr16	23111447	23111511	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.0362
chr19	3946356	3946377	protein_coding	Unc93b1	intron	ENSMUSG00000036908	ProperStrand	5	chr17	24856615	24856752	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-11.5674
chr3	94442886	94442943	protein_coding	Tuft1	exon	ENSMUSG00000005968	ProperStrand	13	chr9	120038471	120038531	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	3	-14.0636
chr8	125915572	125916841	protein_coding	Tcf25	exon	ENSMUSG00000001472	ProperStrand	66	chr4	151643148	151643252	protein_coding	Acot7	intron	ENSMUSG00000028937	ProperStrand	15	4	-20.8796
chr11	103304922	103304940	LTR	RLTR17	ERVK	chr11RLTR17103304661	ProperStrand	1	chr1	162965530	162965598	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-inf
chr2	37431984	37432001	protein_coding	Strbp	utr3	ENSMUSG00000026915	ProperStrand	90	chr19	8895117	8895141	protein_coding	Hnrnpul2	exon	ENSMUSG00000071659	ProperStrand	93	1	-11.6178
chr18	21179369	21179469	protein_coding	Rnf138	intron	ENSMUSG00000024317	ProperStrand	12	chr18	35716848	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-5.1577
chr3	152932163	152932251	protein_coding	St6galnac3	intron	ENSMUSG00000052544	NonProperStrand	11	chr16	23110864	23110892	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.6241
chr1	53405302	53405392	protein_coding	Asnsd1	utr5	ENSMUSG00000026095	ProperStrand	6	chr4	131908751	131908810	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.3738
chr17	39980045	39980087	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr1	74415168	74415184	protein_coding	Gm216	exon	ENSMUSG00000073650	ProperStrand	33	1	-8.4212
chr10	79616642	79616742	protein_coding	Midn	exon	ENSMUSG00000035621	ProperStrand	36	chr7	150717298	150717348	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-6.5149
chr2	90235319	90235338	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	134110716	134111233	protein_coding	Sez6l2	exon	ENSMUSG00000030683	ProperStrand	94	1	-3.6186
chr8	77742558	77742574	protein_coding	Rasd2	exon	ENSMUSG00000034472	NonProperStrand	237	chr4	141027402	141027481	protein_coding	Spen	exon	ENSMUSG00000040761	ProperStrand	161	1	-8.5823
chr17	13112450	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	chr2	130101241	130101281	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	6	-1.8477
chr15	103129624	103129683	protein_coding	Copz1	utr3	ENSMUSG00000060992	ProperStrand	45	chr4	131908803	131908893	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-3.0502
chr4	131908418	131908454	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr5	34112034	34112050	protein_coding	Letm1	exon	ENSMUSG00000005299	NonProperStrand	145	1	-5.5207
chr19	60857392	60857411	protein_coding	Eif3a	exon	ENSMUSG00000024991	ProperStrand	287	chr10	23505559	23505621	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	4	-14.1759
chr2	42692106	42692124	LINE	Lx9	L1	chr2Lx942691528	NonProperStrand	1	chr18	35714144	35714262	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-inf
chr4	41163631	41163658	protein_coding	Ubap2	exon	ENSMUSG00000028433	ProperStrand	292	chr11	4820972	4820990	protein_coding	Thoc5	intron	ENSMUSG00000034274	ProperStrand	325	1	-6.7754
chr4	86503239	86503268	protein_coding	Rps6	utr5	ENSMUSG00000028495	ProperStrand	263	chr14	103745733	103745751	protein_coding	Mycbp2	utr5	ENSMUSG00000033004	ProperStrand	129	1	-8.8170
chr14	120697356	120697372	protein_coding	Mbnl2	intron	ENSMUSG00000022139	ProperStrand	15	chr16	23110875	23110935	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.0842
chr3	54564829	54564847	protein_coding	Smad9	intron	ENSMUSG00000027796	ProperStrand	24	chr1	90161036	90161112	protein_coding	Hjurp	utr3	ENSMUSG00000044783	ProperStrand	110	1	-13.9559
chr4	99577397	99577413	protein_coding	Itgb3bp	intron	ENSMUSG00000028549	ProperStrand	55	chr5	121655016	121655155	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	4	-12.7903
chr10	84130203	84136143	protein_coding	Polr3b	exon	ENSMUSG00000034453	ProperStrand	41	chr3	153575089	153575109	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	2	-14.6819
chr5	34112034	34112050	protein_coding	Letm1	exon	ENSMUSG00000005299	NonProperStrand	145	chr7	108440949	108440967	protein_coding	Atg16l2	intron	ENSMUSG00000047767	ProperStrand	121	1	-10.1340
chrX	103395907	103396007	protein_coding	Pgk1	intron	ENSMUSG00000062070	ProperStrand	484	chr19	8799043	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	6	-12.2592
chr8	73419684	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	chr2	166890813	166890837	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	1	-0.8699
chrX	100767009	100767025	non_coding	B230206F22Rik	.	ENSMUSG00000086370	NonProperStrand	20	chr2	130101241	130101311	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-8.7990
chr11	28767735	28767751	protein_coding	Efemp1	exon	ENSMUSG00000020467	NonProperStrand	5	chr4	116827119	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-12.1898
mmu-miR-6240	1	23	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr10	107800798	107800854	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	1	-1.2617
chr10	120709244	120712786	protein_coding	Tbc1d30	exon	ENSMUSG00000052302	ProperStrand	233	chr12	29316580	29318654	protein_coding	Rps7	exon	ENSMUSG00000061477	ProperStrand	129	1	-9.0585
chr7	29700263	29701212	protein_coding	Actn4	exon	ENSMUSG00000054808	ProperStrand	120	chr7	117166772	117166852	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-3.5091
chr4	34755275	34755375	protein_coding	Zfp292	exon	ENSMUSG00000039967	ProperStrand	45	chr16	23111435	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-6.7814
chr12	111782391	111783983	protein_coding	Ppp2r5c	exon	ENSMUSG00000017843	ProperStrand	36	chr17	35299565	35299631	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-5.7741
chr5	136259340	136260134	protein_coding	Mdh2	exon	ENSMUSG00000019179	ProperStrand	50	chr5	130300419	130300509	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-7.3197
chr2	90235299	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	40762540	40762559	protein_coding	4931429I11Rik	intron	ENSMUSG00000032023	NonProperStrand	49	1	-4.8520
chr11	62416578	62416598	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	chr14	96988047	96988179	snoRNA	ENSMUSG00000064581_SNORA30	.	ENSMUSG00000064581	ProperStrand	146	1	-3.4829
chr10	92447516	92447534	protein_coding	Gm872	intron	ENSMUSG00000020014	ProperStrand	14	chr19	8799831	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-7.8511
chr9	59516481	59527057	protein_coding	Pkm2	utr3	ENSMUSG00000032294	ProperStrand	1296	chr5	130300431	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	11	-1.1207
chr19	34999238	34999254	protein_coding	Kif20b	exon	ENSMUSG00000024795	NonProperStrand	28	chr2	29927581	29927628	protein_coding	Set	utr3	ENSMUSG00000054766	ProperStrand	167	1	-12.7995
chr7	134416788	134416834	protein_coding	Sephs2	exon	ENSMUSG00000049091	ProperStrand	15	chr10	23505190	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-6.1124
chr1	93869326	93869384	protein_coding	Hdac4	exon	ENSMUSG00000026313	ProperStrand	27	chr6	71832549	71832649	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-7.1966
chr2	90235299	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	116165245	116165266	protein_coding	Exoc7	intron	ENSMUSG00000020792	ProperStrand	24	1	-6.2570
chr6	71832586	71832654	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	chr16	13437447	13437487	tRNA	tRNA50-ThrCGT	.	67728	ProperStrand	7	4	-inf
chr4	137149715	137149732	protein_coding	Usp48	utr5	ENSMUSG00000043411	NonProperStrand	10	chr11	62416574	62416625	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-8.7767
chr9	120038613	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	chr13	22107696	22107732	tRNA	tRNA974-ValAAC	.	320847	ProperStrand	28	2	-7.4582
chr7	133592210	133592226	protein_coding	Atp2a1	exon	ENSMUSG00000030730	ProperStrand	49	chr18	73693113	73693139	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-5.9216
chr3	41363909	41363970	protein_coding	Phf17	intron	ENSMUSG00000025764	ProperStrand	101	chr8	13416897	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	2	-8.8914
chr14	28303941	28305011	protein_coding	Ccdc66	exon	ENSMUSG00000046753	ProperStrand	4	chr3	68889048	68889128	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-8.7538
chr5	136611772	136611788	protein_coding	Lrwd1	exon	ENSMUSG00000029703	ProperStrand	27	chr19	8798485	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-6.7897
chr3	142351261	142351279	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr4	147454655	147455713	protein_coding	Agtrap	exon	ENSMUSG00000029007	ProperStrand	18	1	-10.2298
chr2	27281841	27281857	protein_coding	Vav2	exon	ENSMUSG00000009621	NonProperStrand	31	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-9.5081
chr6	92828412	92828429	protein_coding	Gm15737	intron	ENSMUSG00000079462	ProperStrand	11	chr5	108336363	108336409	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-8.2822
chr1	88247741	88247799	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	chr11	116938563	116938663	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	4	-0.8918
chr11	100452358	100452818	protein_coding	Dnajc7	exon	ENSMUSG00000014195	ProperStrand	49	chr11	74748899	74748916	protein_coding	Smg6	exon	ENSMUSG00000038290	NonProperStrand	20	1	-15.9616
chr11	106850143	106850175	protein_coding	Kpna2	utr3	ENSMUSG00000018362	ProperStrand	70	chr5	111121066	111121140	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	5	-inf
chr4	137108737	137108754	protein_coding	Hspg2	exon	ENSMUSG00000028763	NonProperStrand	18	chr5	108334195	108334238	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-7.2063
chr3	152450610	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	chr13	51743567	51743662	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	3	-6.7702
chr7	148418361	148448400	protein_coding	Phrf1	exon	ENSMUSG00000038611	ProperStrand	86	chr16	23110866	23110994	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-1.9490
chr15	48004946	48004964	protein_coding	Csmd3	intron	ENSMUSG00000022311	NonProperStrand	25	chr19	8798484	8798554	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-11.2200
chr13	93275630	93275650	protein_coding	Zfyve16	exon	ENSMUSG00000021706	ProperStrand	14	chr6	71832610	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-8.5338
chr15	98665625	98665642	protein_coding	Mll2	exon	ENSMUSG00000048154	ProperStrand	170	chr3	68889026	68889126	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-1.5220
chr2	126472468	126472484	protein_coding	Gabpb1	exon	ENSMUSG00000027361	ProperStrand	54	chr11	6428103	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.3840
chr19	44188392	44188526	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr10	23505559	23505590	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-2.3307
chr9	104054201	104054301	protein_coding	Dnajc13	utr3	ENSMUSG00000032560	ProperStrand	60	chr9	64024957	64024998	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	1	-9.1419
chr8	64028788	64028888	protein_coding	Palld	utr5	ENSMUSG00000058056	ProperStrand	39	chr11	62416630	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-9.7903
chr7	116036001	116036022	LINE	Lx4B	L1	chr7Lx4B116035466	ProperStrand	3	chr7	117189925	117190025	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-9.5269
chr13	23647445	23647545	protein_coding	Hist1h1d	exon	ENSMUSG00000052565	ProperStrand	78	chr9	40612873	40612921	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	1	-9.0175
chrX	7752870	7752886	protein_coding	Tbc1d25	exon	ENSMUSG00000039201	ProperStrand	126	chr17	35089181	35089236	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-4.0611
chr10	76528038	76529741	protein_coding	Col18a1	exon	ENSMUSG00000001435	ProperStrand	287	chrX	84483736	84483762	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	2	-8.4770
chr5	75473198	75473215	protein_coding	Gsx2	utr3	ENSMUSG00000035946	ProperStrand	307	chr5	121655099	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-1.0773
chr1	12849615	12849705	protein_coding	Sulf1	utr3	ENSMUSG00000016918	ProperStrand	22	chr3	68889155	68889240	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-5.1648
chr3	55112038	55112061	protein_coding	Dclk1	intron	ENSMUSG00000027797	ProperStrand	6	chr6	94093890	94093983	protein_coding	Magi1	intron	ENSMUSG00000045095	ProperStrand	106	1	-16.8192
chr4	86502148	86502222	protein_coding	Rps6	exon	ENSMUSG00000028495	ProperStrand	263	chr7	52382754	52382832	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-3.8937
chr4	44139834	44139850	protein_coding	Rnf38	utr3	ENSMUSG00000035696	ProperStrand	66	chr18	33954816	33954926	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-3.3309
chr5	34694239	34694297	protein_coding	Rnf4	utr3	ENSMUSG00000029110	ProperStrand	27	chr3	82816757	82816773	protein_coding	Fgg	exon	ENSMUSG00000033860	NonProperStrand	321	1	-11.5670
chr3	122592323	122592339	lincRNA	4933405D12Rik	exon	ENSMUSG00000086397	NonProperStrand	5	chr7	116663664	116663769	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	5	-inf
chr11	48616656	48616706	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	chr2	26494708	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-0.8223
chr7	20011162	20011250	protein_coding	Mark4	utr3	ENSMUSG00000030397	ProperStrand	18	chr16	23110909	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7867
chr1	133141328	133141345	protein_coding	Rassf5	exon	ENSMUSG00000026430	ProperStrand	73	chr14	33005094	33005234	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	4	-12.0209
chr15	79826727	79826827	protein_coding	Pdgfb	utr3	ENSMUSG00000000489	ProperStrand	11	chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-9.2711
chr8	72613823	72613839	protein_coding	Hapln4	utr3	ENSMUSG00000007594	NonProperStrand	85	chr5	108334195	108334260	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-4.1550
chr11	68655668	68657336	protein_coding	Ndel1	exon	ENSMUSG00000018736	ProperStrand	30	chr12	17553062	17553087	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-6.4541
chr10	79245199	79245274	protein_coding	Fstl3	utr3	ENSMUSG00000020325	ProperStrand	2	chr5	111121066	111121095	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	2	-inf
chr1	75186911	75186928	protein_coding	Atg9a	exon	ENSMUSG00000033124	ProperStrand	17	chr11	97642949	97643007	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-8.0294
chr16	90244523	90244582	protein_coding	Scaf4	exon	ENSMUSG00000022983	ProperStrand	44	chr17	13115655	13115745	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	5	-inf
chr17	34065691	34065736	protein_coding	Tapbp	utr3	ENSMUSG00000024308	ProperStrand	14	chr2	152119846	152119862	protein_coding	Tbc1d20	intron	ENSMUSG00000027465	ProperStrand	27	1	-17.8220
chr11	53407469	53407549	protein_coding	Kif3a	exon	ENSMUSG00000018395	ProperStrand	23	chr7	134671414	134671504	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-9.8056
chr9	54852235	54852335	protein_coding	Chrna5	exon	ENSMUSG00000035594	ProperStrand	1	chr18	33954874	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-inf
chr12	103425979	103425998	protein_coding	Slc24a4	intron	ENSMUSG00000041771	ProperStrand	9	chr2	22444762	22444818	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-11.6548
chr9	45198928	45199653	protein_coding	Fxyd6	exon	ENSMUSG00000066705	NonProperStrand	108	chr19	8799581	8799645	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-5.6096
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr11	108810593	108810609	protein_coding	Axin2	exon	ENSMUSG00000000142	ProperStrand	23	1	-10.6535
chr5	34091440	34095148	protein_coding	Letm1	exon	ENSMUSG00000005299	ProperStrand	21	chr16	23111697	23111777	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.7491
chr5	135853954	135854005	protein_coding	Pom121	exon	ENSMUSG00000053293	ProperStrand	127	chr13	46765144	46765160	protein_coding	C78339	exon	ENSMUSG00000069237	NonProperStrand	104	1	-10.7029
chr7	142895833	142896022	protein_coding	Mki67	exon	ENSMUSG00000031004	ProperStrand	286	chr18	33954830	33954910	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-1.0005
chr2	152656290	152656306	protein_coding	Bcl2l1	utr5	ENSMUSG00000007659	NonProperStrand	29	chr4	21606097	21606114	protein_coding	Prdm13	exon	ENSMUSG00000040478	ProperStrand	51	1	-15.1235
chr17	87768662	87768685	protein_coding	Ttc7	intron	ENSMUSG00000036918	ProperStrand	6	chr7	133991458	133991476	protein_coding	Doc2a	utr5	ENSMUSG00000052301	ProperStrand	3	1	-inf
chr7	16534823	16534839	protein_coding	Ehd2	utr3	ENSMUSG00000074364	NonProperStrand	197	chr4	131908236	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-1.6183
chr11	68067261	68067277	protein_coding	Ntn1	intron	ENSMUSG00000020902	NonProperStrand	194	chr2	26493383	26493483	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-1.7218
chr9	63066908	63066926	protein_coding	Map2k5	intron	ENSMUSG00000058444	NonProperStrand	79	chr9	120038613	120038678	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.5560
chr7	137677123	137677156	protein_coding	Nsmce4a	exon	ENSMUSG00000040331	ProperStrand	14	chr2	26494759	26494826	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.9058
chr1	182824353	182824453	protein_coding	Lefty2	exon	ENSMUSG00000066652	ProperStrand	48	chr16	23111690	23111753	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.2671
chr14	10031400	10031490	LINE	L1MB7	L1	chr14L1MB710031041	ProperStrand	1	chr14	11248212	11248302	protein_coding	Fhit	intron	ENSMUSG00000060579	NonProperStrand	51	1	-inf
chr14	33389936	33389987	protein_coding	Ercc6	exon	ENSMUSG00000054051	ProperStrand	19	chr4	131908804	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.0948
chr2	41199972	41199989	protein_coding	Lrp1b	exon	ENSMUSG00000049252	ProperStrand	376	chr15	34370630	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-1.4743
chr7	26122811	26122901	protein_coding	Megf8	exon	ENSMUSG00000045039	ProperStrand	100	chr4	131908261	131908341	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-2.6203
chr9	78023175	78023223	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr13	22006770	22006792	tRNA	tRNA85-LeuCAA	.	42429	ProperStrand	54	1	-6.0853
chr5	77765467	77765547	protein_coding	Polr2b	exon	ENSMUSG00000029250	ProperStrand	68	chr18	35716698	35716788	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.9662
chr3	89150803	89150824	protein_coding	Adam15	exon	ENSMUSG00000028041	ProperStrand	40	chr11	77996557	77996615	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-6.8961
chr5	124159392	124159429	protein_coding	Zcchc8	exon	ENSMUSG00000029427	ProperStrand	13	chr4	142718600	142718641	protein_coding	Prdm2	intron	ENSMUSG00000057637	ProperStrand	46	1	-17.0458
chr2	25301593	25301792	protein_coding	Abca2	exon	ENSMUSG00000026944	ProperStrand	57	chr4	131908241	131908291	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.4931
chr7	107475997	107476061	protein_coding	Ppme1	utr3	ENSMUSG00000030718	ProperStrand	38	chr5	74489575	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-4.6454
chr2	157622361	157622451	protein_coding	Ctnnbl1	intron	ENSMUSG00000027649	ProperStrand	26	chr16	23111405	23111485	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.5788
chr9	59516485	59516804	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr12	110918200	110918221	snoRNA	ENSMUSG00000065749_AF357428	.	ENSMUSG00000065749	ProperStrand	218	1	-4.6554
chr13	9574684	9574701	protein_coding	Dip2c	exon	ENSMUSG00000048264	NonProperStrand	51	chr15	34370661	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-3.8514
chr5	130295415	130295505	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	chr9	64022854	64022917	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-0.8102
chr19	8798776	8798835	lincRNA	Snhg1	exon	ENSMUSG00000090867	ProperStrand	100	chr2	53015676	53015713	protein_coding	Prpf40a	exon	ENSMUSG00000061136	ProperStrand	129	1	-10.7503
chr2	118862815	118862905	protein_coding	Rpusd2	exon	ENSMUSG00000027324	ProperStrand	11	chr9	109989440	109989520	protein_coding	Dhx30	exon	ENSMUSG00000032480	ProperStrand	29	5	-inf
chr11	97889743	97890723	protein_coding	Rpl19	exon	ENSMUSG00000017404	ProperStrand	120	chr12	17552972	17553016	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	2	-6.3639
chr7	129237157	129237238	protein_coding-noncoding	Ndufab1	utr3	ENSMUSG00000030869	ProperStrand	2	chr16	23110558	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-inf
chr4	131908721	131908821	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	chr13	12682018	12682057	snoRNA	ENSMUSG00000065158_SNORA73	.	ENSMUSG00000065158	ProperStrand	10	4	-14.6314
chr8	71636985	71637031	protein_coding	Atp6v1b2	utr3	ENSMUSG00000006273	ProperStrand	29	chr19	7032606	7033324	protein_coding	Plcb3	exon	ENSMUSG00000024960	ProperStrand	111	1	-13.5517
chr7	109563967	109569884	protein_coding	Stim1	exon	ENSMUSG00000030987	ProperStrand	24	chr17	35299507	35299597	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-6.5813
chr19	43954167	43954184	protein_coding	Dnmbp	intron	ENSMUSG00000025195	ProperStrand	15	chr9	120038551	120038607	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.6922
chr2	57220828	57220902	protein_coding	Gpd2	utr3	ENSMUSG00000026827	ProperStrand	93	chr19	8799849	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-4.1096
chr6	121032533	121032550	SINE	ID_B1	B4	chr6ID_B1121032513	ProperStrand	10	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-6.7807
chr16	23111376	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	chr16	20684332	20684388	snoRNA	ENSMUSG00000077239_Snord66	.	ENSMUSG00000077239	ProperStrand	159	6	-3.7765
chr7	28970920	28970944	protein_coding	Dyrk1b	exon	ENSMUSG00000002409	ProperStrand	3	chr5	92485157	92485218	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	1	-15.1184
chr2	106661966	106661983	protein_coding	Mpped2	intron	ENSMUSG00000016386	NonProperStrand	7	chr16	57391590	57391690	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	1	-14.7281
chrX	152009278	152009294	protein_coding	Ptchd1	exon	ENSMUSG00000041552	NonProperStrand	294	chr4	131865855	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-0.7024
chrX	91435146	91435176	protein_coding	Eif2s3x	utr3	ENSMUSG00000035150	NonProperStrand	83	chr16	23111391	23111481	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.8462
chr17	31487317	31487335	protein_coding	Slc37a1	utr3	ENSMUSG00000024036	NonProperStrand	4	chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	1	-14.2637
chr13	9833551	9833679	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr11	62416578	62416596	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	1	-1.2119
chr2	90235303	90235340	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr18	75161125	75161173	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	1	-0.9159
chr8	127317792	127317808	protein_coding	Trim67	utr5	ENSMUSG00000036913	ProperStrand	43	chr11	69483218	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.0333
chr5	108334195	108334270	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	chr2	166890799	166890858	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	1	-2.1690
chr14	78852385	78852401	LTR	MTC	MaLR	chr14MTC78852155	NonProperStrand	5	chr16	23110986	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr2	86254150	86254167	protein_coding	Olfr1061	exon	ENSMUSG00000075185	NonProperStrand	1	chr16	23111758	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-inf
chr10	127136453	127136562	protein_coding	Tmem194	utr3	ENSMUSG00000040195	ProperStrand	6	chr1	162965562	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-18.0133
chr11	113423607	113423624	protein_coding	Slc39a11	intron	ENSMUSG00000041654	NonProperStrand	39	chr4	122968584	122968655	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-7.1369
chr2	130101985	130102085	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	chr6	71832578	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	6	-1.5255
chr6	135161845	135161935	protein_coding	8430419L09Rik	exon	ENSMUSG00000030207	ProperStrand	14	chr7	116664832	116664912	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	6	-inf
chr9	40611661	40611751	snoRNA	ENSMUSG00000075876_Snord14c	.	ENSMUSG00000075876	ProperStrand	104	chr10	110918553	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	3	-6.5277
chr7	125252705	125253524	protein_coding	Rps15a	exon	ENSMUSG00000008683	ProperStrand	28	chr19	8963085	8963175	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.6314
chr11	74537511	74537591	protein_coding	Pafah1b1	utr5	ENSMUSG00000020745	ProperStrand	20	chr11	98878341	98878431	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-8.4885
chr13	37949990	37950007	protein_coding	Rreb1	intron	ENSMUSG00000039087	NonProperStrand	8	chr1	89303688	89303714	protein_coding	Gigyf2	exon	ENSMUSG00000048000	ProperStrand	128	1	-15.9081
chr8	119781044	119781095	protein_coding	4933407C03Rik	exon	ENSMUSG00000034390	ProperStrand	48	chr4	131866207	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-6.8596
chr1	116762665	116762683	LTR	RMER17A2	ERVK	chr1RMER17A2116762668	ProperStrand	2	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-8.7800
chr16	44481486	44481503	protein_coding	Wdr52	utr3	ENSMUSG00000071550	NonProperStrand	6	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-7.8657
chr5	121656677	121656708	protein_coding	Rpl6	exon	ENSMUSG00000029614	ProperStrand	332	chr11	6519854	6519944	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-4.5885
chr6	88841995	88842041	protein_coding	Mcm2	exon	ENSMUSG00000002870	ProperStrand	83	chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	1	-7.4620
chr11	97023646	97023725	protein_coding	Kpnb1	utr3	ENSMUSG00000001440	NonProperStrand	8	chr16	23110923	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	NonProperStrand	93	1	-16.4857
chr2	90235286	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	174256151	174256167	protein_coding	Kcnj9	exon	ENSMUSG00000038026	NonProperStrand	12	2	-12.3824
chrX	49918662	49918684	protein_coding	Gpc3	intron	ENSMUSG00000055653	ProperStrand	43	chr11	69481332	69481434	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.8146
chr1	137924099	137930679	protein_coding	Tmem9	exon	ENSMUSG00000026411	ProperStrand	14	chr16	23110902	23110992	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.2008
chr14	72301755	72301771	SINE	B4	B4	chr14B472301692	NonProperStrand	99	chr11	106362640	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-6.4116
chr4	137106330	137106744	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	1	-4.3659
chr11	86535792	86538591	protein_coding	Cltc	exon	ENSMUSG00000047126	ProperStrand	319	chr12	112779175	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	7	-13.8698
chr12	86473698	86473794	protein_coding	Dlst	utr3	ENSMUSG00000004789	ProperStrand	52	chr19	8798506	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-5.4907
chr2	9781257	9781273	protein_coding	Gata3	intron	ENSMUSG00000015619	ProperStrand	12	chr12	109460710	109460726	protein_coding	Ccdc85c	intron	ENSMUSG00000084883	ProperStrand	157	1	-14.6682
chr8	87829175	87829215	protein_coding	Orc6	exon	ENSMUSG00000031697	ProperStrand	23	chr9	120038467	120038527	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-8.0516
chr7	116664811	116664924	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	chr13	90238639	90238700	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	5	-1.0763
chr12	111873899	111874143	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr18	73693171	73693187	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-1.3275
chr13	9833561	9833660	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr5	92485165	92485208	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	3	-3.3280
chr11	48619094	48619485	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	1	-5.9615
chr11	8768431	8768448	protein_coding	Pkd1l1	intron	ENSMUSG00000046634	ProperStrand	3	chr17	24857716	24857775	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-8.3442
chr17	28465777	28465925	protein_coding	Rpl10a	exon	ENSMUSG00000037805	ProperStrand	121	chr14	33005146	33005236	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-2.7189
chr4	129353968	129353988	protein_coding	Tmem39b	exon	ENSMUSG00000053730	ProperStrand	4	chr19	8800375	8800465	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-9.0532
chr16	17655640	17655778	protein_coding	Med15	exon	ENSMUSG00000012114	ProperStrand	24	chr8	113362431	113362481	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	1	-11.1181
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr18	20123591	20123608	protein_coding	Dsc3	intron	ENSMUSG00000059898	ProperStrand	31	3	-13.3774
chr8	24050087	24050143	protein_coding	Myst3	exon	ENSMUSG00000031540	ProperStrand	111	chr7	88489430	88489446	protein_coding	Rps17	intron	ENSMUSG00000061787	ProperStrand	105	2	-17.1538
chr2	32087701	32087801	protein_coding	Prrc2b	utr3	ENSMUSG00000039262	ProperStrand	344	chr12	106269284	106269302	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-1.2044
chr8	113796378	113796426	protein_coding	Rfwd3	utr3	ENSMUSG00000033596	ProperStrand	71	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.0857
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr8	77593657	77593673	protein_coding	Tom1	utr3	ENSMUSG00000042870	ProperStrand	30	2	-14.5863
chr11	14047507	14047524	lincRNA	4930554G24Rik	exon	ENSMUSG00000085452	ProperStrand	23	chr4	46157732	46158282	protein_coding	Ncbp1	exon	ENSMUSG00000028330	ProperStrand	21	1	-17.1449
chr2	120996749	120996766	protein_coding	Tubgcp4	intron	ENSMUSG00000027263	ProperStrand	30	chr8	75249543	75249581	protein_coding	Sin3b	exon	ENSMUSG00000031622	ProperStrand	66	1	-14.5254
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	141319671	141319687	protein_coding	Zbtb41	utr5	ENSMUSG00000033964	NonProperStrand	145	1	-2.8369
chr1	43106547	43106563	protein_coding	Tgfbrap1	exon	ENSMUSG00000070939	ProperStrand	29	chr16	23110911	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0921
chr11	53704687	53704769	protein_coding	Slc22a5	exon	ENSMUSG00000018900	ProperStrand	9	chr13	24054678	24054694	protein_coding	Scgn	exon	ENSMUSG00000021337	ProperStrand	16	1	-19.4429
chr5	110679785	110679857	protein_coding	Ankle2	intron	ENSMUSG00000029501	ProperStrand	23	chr10	79750222	79750290	protein_coding	Dazap1	intron	ENSMUSG00000069565	ProperStrand	57	1	-15.3331
chr11	115200753	115200770	protein_coding	Otop3	exon	ENSMUSG00000018862	ProperStrand	59	chr4	32772653	32772723	protein_coding	Mdn1	exon	ENSMUSG00000058006	ProperStrand	184	1	-11.0991
chr1	30862585	30862685	protein_coding	Phf3	exon	ENSMUSG00000048874	ProperStrand	102	chr7	116664862	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-3.1104
chr3	68793582	68793672	protein_coding	Ift80	intron	ENSMUSG00000027778	ProperStrand	6	chr1	89673642	89673722	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-7.8515
chr11	58160441	58160472	protein_coding	Sh3bp5l	utr3	ENSMUSG00000013646	ProperStrand	7	chr16	23110855	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-12.9875
chr10	23505540	23506817	protein_coding	Rps12	intron	ENSMUSG00000061983	ProperStrand	309	chr1	9932561	9932626	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	2	-7.5010
chr7	17375280	17375380	protein_coding	Slc1a5	intron	ENSMUSG00000001918	ProperStrand	19	chr8	73419745	73419784	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-5.3188
chr10	119542978	119543077	protein_coding	Helb	exon	ENSMUSG00000020228	ProperStrand	41	chr11	77995202	77995255	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-6.9382
chr8	27384889	27384905	LTR	MLT1B	MaLR	chr8MLT1B27384841	ProperStrand	10	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.0395
chr18	81027560	81027617	protein_coding	Atp9b	intron	ENSMUSG00000024566	ProperStrand	30	chr19	8963083	8963178	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-5.9896
chr4	107557864	107557907	protein_coding	Magoh	intron	ENSMUSG00000028609	ProperStrand	5	chr7	75384414	75384431	protein_coding	Pgpep1l	intron	ENSMUSG00000030553	NonProperStrand	1	1	-inf
chr7	74676633	74690259	protein_coding	Lrrc28	exon	ENSMUSG00000030556	ProperStrand	23	chr4	131908236	131908273	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-7.7744
chr9	78023130	78023210	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr2	70528797	70528887	protein_coding	Gorasp2	exon	ENSMUSG00000014959	ProperStrand	21	1	-7.9760
chr9	78053767	78053857	protein_coding	Gsta4	exon	ENSMUSG00000032348	ProperStrand	82	chr17	35299561	35299641	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-4.1809
chr11	57329503	57329533	protein_coding	Fam114a2	intron	ENSMUSG00000020523	ProperStrand	25	chr4	131866155	131866235	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-8.8066
chr12	3660755	3660775	protein_coding	Dtnb	intron	ENSMUSG00000071454	ProperStrand	11	chr9	15119646	15119736	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.8656
chr15	81208402	81213441	protein_coding	St13	exon	ENSMUSG00000022403	ProperStrand	59	chr14	52829523	52829570	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-8.2358
chr5	117151531	117151621	SINE	MIR	MIR	chr5MIR117151399	ProperStrand	1	chr5	117151290	117151380	Simple_repeat	(CACCAT)n	Simple_repeat	chr5(CACCAT)n117151305	NonProperStrand	1	1	-inf
chr3	94167315	94167331	protein_coding	C2cd4d	utr5	ENSMUSG00000091648	ProperStrand	30	chr9	15119646	15119968	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-6.5829
chr15	102844825	102844841	protein_coding	Hoxc5	exon	ENSMUSG00000022485	ProperStrand	40	chr7	116664869	116664909	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.2687
chr8	13417108	13417234	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr14	34781022	34781121	protein_coding	Zfp488	utr3	ENSMUSG00000044519	ProperStrand	54	2	-10.7624
chr12	68768930	68769010	LINE	L1Md_F2	L1	chr12L1Md_F268768613	ProperStrand	13	chr10	26941934	26942022	protein_coding	Lama2	intron	ENSMUSG00000019899	ProperStrand	6	1	-19.5123
chr4	132530097	132530117	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	chr5	121655100	121655150	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-0.8097
chr4	107877325	107877415	protein_coding	Zyg11a	exon	ENSMUSG00000034645	ProperStrand	19	chr14	76247711	76247750	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-10.4571
chr5	122907201	122907291	protein_coding	Atp2a2	exon	ENSMUSG00000029467	ProperStrand	166	chr19	8963100	8963180	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-0.8128
chr8	122086529	122086629	protein_coding	Hsdl1	utr3	ENSMUSG00000034189	ProperStrand	11	chr7	118219574	118219630	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-7.5402
chr3	94965441	94965458	protein_coding	Sema6c	intron	ENSMUSG00000038777	NonProperStrand	4	chr7	116663633	116663759	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-7.9103
chr9	119193711	119193746	protein_coding	Oxsr1	exon	ENSMUSG00000036737	ProperStrand	33	chr3	123210854	123210928	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.0977
chr7	151642352	151642393	protein_coding	Cttn	exon	ENSMUSG00000031078	ProperStrand	33	chr7	38537724	38537741	protein_coding	Zfp536	intron	ENSMUSG00000043456	ProperStrand	57	1	-14.6123
chr5	125531369	125531385	protein_coding	Ncor2	exon	ENSMUSG00000029478	ProperStrand	377	chr11	106362638	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-3.8384
chr4	40111768	40114103	protein_coding	Aco1	exon	ENSMUSG00000028405	ProperStrand	25	chr7	29136575	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.9451
chr14	22490325	22490384	protein_coding	Myst4	utr3	ENSMUSG00000021767	ProperStrand	151	chr2	26493366	26493447	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-2.1178
chr1	169256098	169256130	protein_coding	Tmco1	exon	ENSMUSG00000052428	ProperStrand	16	chr4	131908356	131908439	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.6705
chr8	123181787	123181872	protein_coding	Cox4nb	utr3	ENSMUSG00000031819	ProperStrand	21	chr3	108357255	108357325	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-6.6051
chr7	133940393	133940863	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	chr12	88778629	88778719	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-1.9106
chr17	72008036	72008160	protein_coding	Wdr43	utr3	ENSMUSG00000041057	ProperStrand	70	chr10	39978465	39978485	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-5.1593
chr6	101485357	101485378	LTR	MTEa	MaLR	chr6MTEa101485361	ProperStrand	45	chr7	13516163	13516212	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	1	-9.2443
chr1	166123159	166123175	protein_coding	F5	exon	ENSMUSG00000026579	NonProperStrand	12	chr9	35012553	35012578	protein_coding	Foxred1	exon	ENSMUSG00000039048	ProperStrand	64	1	-16.4359
chr19	7449098	7449198	protein_coding	AI846148	exon	ENSMUSG00000024970	ProperStrand	17	chr8	129468744	129468814	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-6.9013
chr17	3197657	3197740	protein_coding	Scaf8	exon	ENSMUSG00000046201	ProperStrand	126	chr16	23110986	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-0.8790
chr10	19624376	19624456	protein_coding	Pex7	exon	ENSMUSG00000020003	ProperStrand	7	chr8	32260372	32260423	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-8.9777
chr7	136751378	136751417	protein_coding	Wdr11	exon	ENSMUSG00000042055	ProperStrand	24	chr7	116664820	116664916	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	4	-13.8015
chr18	12692470	12692487	protein_coding	Lama3	exon	ENSMUSG00000024421	ProperStrand	20	chr17	36097663	36097764	protein_coding	Abcf1	exon	ENSMUSG00000038762	ProperStrand	206	1	-13.0685
chr7	51794248	51794265	protein_coding	Pold1	exon	ENSMUSG00000038644	NonProperStrand	10	chr17	79250768	79250789	pseudogene	Gm6548	.	ENSMUSG00000091549	ProperStrand	33	1	-17.7643
chr14	63760610	63761069	protein_coding	Ctsb	exon	ENSMUSG00000021939	ProperStrand	48	chr11	97642950	97643008	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.8600
chr2	179992520	179992546	protein_coding	Rps21	exon	ENSMUSG00000039001	ProperStrand	46	chr1	39605591	39605628	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-7.8747
chr9	103092234	103092299	protein_coding	Srprb	utr3	ENSMUSG00000032553	ProperStrand	11	chr11	69483188	69483282	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	7	-inf
chr7	87260056	87260123	protein_coding	Idh2	exon	ENSMUSG00000030541	ProperStrand	21	chr1	159163992	159164009	protein_coding	Rasal2	intron	ENSMUSG00000070565	NonProperStrand	22	1	-17.3356
chr18	14806275	14806365	snRNA	ENSMUSG00000065369_U1	.	ENSMUSG00000065369	ProperStrand	5	chr9	120039567	120039647	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-8.3145
chr6	88462161	88462219	protein_coding	Sec61a1	exon	ENSMUSG00000030082	ProperStrand	46	chr7	135123049	135123139	protein_coding	Fus	intron	ENSMUSG00000030795	ProperStrand	162	1	-11.8566
chr17	47537336	47537355	protein_coding	Guca1a	exon	ENSMUSG00000023982	ProperStrand	7	chr10	127525576	127526103	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	3	-22.8977
chr5	77760218	77760247	protein_coding	Polr2b	exon	ENSMUSG00000029250	ProperStrand	68	chr7	117189957	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	4	-10.6552
chrX	108512262	108513830	protein_coding	Rps6ka6	exon	ENSMUSG00000025665	ProperStrand	17	chr10	110918639	110918693	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-5.8838
chr10	79191822	79193647	protein_coding	Hcn2	exon	ENSMUSG00000020331	ProperStrand	17	chr10	39978350	39978430	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	3	-17.9544
chr19	36963357	36964413	protein_coding	Tnks2	exon	ENSMUSG00000024811	ProperStrand	133	chr7	116664794	116664884	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.2990
chr13	23673541	23673599	protein_coding	Hist1h4d	exon	ENSMUSG00000061482	ProperStrand	57	chr17	24856663	24856753	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	4	-18.7534
chr4	151518760	151518779	protein_coding	Espn	intron	ENSMUSG00000028943	NonProperStrand	5	chr6	71832629	71832687	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	2	-17.1831
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr4	151513277	151513293	protein_coding	Espn	exon	ENSMUSG00000028943	ProperStrand	18	1	-8.3164
chr2	152656290	152656306	protein_coding	Bcl2l1	utr5	ENSMUSG00000007659	NonProperStrand	29	chr9	15119631	15119693	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.9539
chr17	39979941	39980012	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr15	79908956	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	7	-6.7930
chr3	135128353	135128405	protein_coding	Ube2d3	utr3	ENSMUSG00000078578	ProperStrand	34	chr3	68889026	68889126	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-4.3182
chr19	5667401	5667491	protein_coding	Pcnxl3	exon	ENSMUSG00000054874	ProperStrand	96	chr11	69483151	69483278	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	4	-6.7333
chr2	173586140	173586160	protein_coding	Vapb	intron	ENSMUSG00000054455	ProperStrand	29	chr4	131866176	131866276	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-5.0536
chr11	69812581	69812776	protein_coding	Phf23	exon	ENSMUSG00000018572	ProperStrand	25	chr8	97784544	97787038	protein_coding	Cngb1	exon	ENSMUSG00000031789	ProperStrand	5	1	-19.0018
chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr1	185857228	185857244	protein_coding	1700056E22Rik	exon	ENSMUSG00000044854	ProperStrand	173	1	-4.3970
chrX	148351947	148352190	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	chr7	150717298	150717359	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-1.6891
chr4	33335354	33335371	protein_coding	Pnrc1	exon	ENSMUSG00000040128	ProperStrand	27	chr11	97642952	97643056	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-6.6305
chr7	53493835	53493851	protein_coding	Ush1c	utr5	ENSMUSG00000030838	NonProperStrand	62	chr18	35716787	35716878	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.1157
chr11	101304846	101304908	protein_coding	Rpl27	exon	ENSMUSG00000063316	ProperStrand	96	chr4	131865883	131865983	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-2.1425
chr4	137071338	137071522	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	chr7	52381722	52381744	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-2.6154
chr2	130375511	130375530	lincRNA	4930473A02Rik	intron	ENSMUSG00000060029	ProperStrand	2	chr16	23110901	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr15	82984905	82985005	protein_coding	Cyb5r3	utr3	ENSMUSG00000018042	ProperStrand	22	chr7	118219575	118219602	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-6.1281
chr2	29036591	29036634	protein_coding	Setx	utr3	ENSMUSG00000043535	ProperStrand	187	chr1	88252836	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	2	-7.3632
chr1	152270735	152270753	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	chr2	27872824	27873976	protein_coding	Col5a1	exon	ENSMUSG00000026837	ProperStrand	35	5	-inf
chr8	98312576	98312639	protein_coding	Cnot1	utr5	ENSMUSG00000036550	ProperStrand	315	chr19	8799595	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	5	-14.9731
chr9	120038466	120040662	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	chr4	131908686	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	9	-1.6865
chr11	120852370	120852460	protein_coding	Csnk1d	utr5	ENSMUSG00000025162	ProperStrand	37	chr2	150445321	150445401	protein_coding	Acss1	utr3	ENSMUSG00000027452	ProperStrand	13	1	-17.3581
chr17	84792791	84794471	protein_coding	Thada	exon	ENSMUSG00000024251	ProperStrand	47	chr2	26766796	26766855	snoRNA	ENSMUSG00000065258_SNORD24	.	ENSMUSG00000065258	ProperStrand	130	1	-12.2539
chr15	68012619	68012635	protein_coding	Zfat	exon	ENSMUSG00000022335	NonProperStrand	25	chr11	68936358	68936374	protein_coding	Hes7	exon	ENSMUSG00000023781	NonProperStrand	66	1	-14.8923
chr3	85888937	85888987	protein_coding	Sh3d19	exon	ENSMUSG00000028082	ProperStrand	58	chr1	162967505	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-6.0180
chr2	79843543	79843559	protein_coding	Pde1a	intron	ENSMUSG00000059173	NonProperStrand	275	chr17	35089237	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-2.6483
chr17	32900980	32901070	LINE	L1VL2	L1	chr17L1VL232900487	NonProperStrand	1	chr17	32901099	32901189	LINE	L1_Mus2	L1	chr17L1_Mus232901089	NonProperStrand	1	1	-inf
chr17	56705791	56705881	protein_coding	Safb2	exon	ENSMUSG00000042625	ProperStrand	29	chr11	69481353	69481433	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-4.5651
chr4	150135317	150135407	LINE	L1MC2	L1	chr4L1MC2150135201	ProperStrand	1	chr4	150135536	150135616	LTR	ORR1B2	MaLR	chr4ORR1B2150135507	ProperStrand	1	1	-inf
chr2	121837355	121837371	protein_coding	Ctdspl2	utr3	ENSMUSG00000033411	NonProperStrand	3	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr3	102972888	102972959	protein_coding	Dennd2c	utr3	ENSMUSG00000007379	ProperStrand	19	chr16	23111439	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.1411
chr2	154687587	154687618	protein_coding	Raly	exon	ENSMUSG00000027593	ProperStrand	116	chr8	73419697	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	5	-9.9030
chr17	79054988	79055167	protein_coding	Strn	exon	ENSMUSG00000024077	ProperStrand	8	chr6	115758034	115758114	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-9.5636
chr2	90235294	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	62418014	62418090	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	10	-1.7137
chr4	98736928	98737003	protein_coding	Dock7	exon	ENSMUSG00000028556	ProperStrand	20	chr4	131908236	131908277	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.2521
chr14	15572351	15572371	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr10	23506278	23506347	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	15	-19.6149
chr4	118809016	118809116	protein_coding	Slc2a1	utr3	ENSMUSG00000028645	ProperStrand	361	chr4	140121137	140121153	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	1	-8.0816
chr5	136707644	136707662	protein_coding	Sh2b2	exon	ENSMUSG00000005057	NonProperStrand	101	chr1	62686775	62686791	protein_coding	Pard3b	utr3	ENSMUSG00000046526	ProperStrand	31	1	-13.6033
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr9	108388655	108388816	protein_coding	Lamb2	exon	ENSMUSG00000052911	ProperStrand	35	2	-11.2446
chr3	142351261	142351279	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr13	55067638	55067655	protein_coding	Unc5a	intron	ENSMUSG00000025876	NonProperStrand	96	1	-6.8605
chr2	80159462	80159530	protein_coding	Dnajc10	intron	ENSMUSG00000027006	ProperStrand	36	chr3	153596068	153596093	protein_coding	Acadm	exon	ENSMUSG00000062908	ProperStrand	14	1	-17.4878
chr11	48619100	48619120	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	chrX	99265697	99265716	protein_coding	Rgag4	exon	ENSMUSG00000049191	ProperStrand	3	1	-16.2052
chr2	129998673	129998711	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr5	23284310	23289422	protein_coding	Pus7	utr5	ENSMUSG00000057541	ProperStrand	23	4	-21.1629
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr3	108228259	108228275	protein_coding	Sars	utr3	ENSMUSG00000068739	NonProperStrand	200	1	-6.5325
chr19	10525980	10525997	protein_coding	Syt7	utr3	ENSMUSG00000024743	NonProperStrand	17	chr7	118219574	118219649	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-10.8042
chr11	88870481	88870538	protein_coding	Trim25	exon	ENSMUSG00000000275	ProperStrand	50	chr15	79913288	79913332	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-3.9322
chr11	94157256	94157287	protein_coding	Luc7l3	exon	ENSMUSG00000020863	ProperStrand	38	chr11	97642952	97643072	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.2805
chr2	174252020	174252120	protein_coding	Th1l	exon	ENSMUSG00000016253	ProperStrand	40	chr16	23110858	23110874	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.7072
chr1	30861966	30862056	protein_coding	Phf3	exon	ENSMUSG00000048874	ProperStrand	102	chr19	8963029	8963109	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.4449
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr16	23111690	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	6	-1.5091
chr8	126553642	126554889	protein_coding	Urb2	exon	ENSMUSG00000031976	ProperStrand	64	chr8	129468760	129468879	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	2	-7.1683
chr11	90198421	90198438	protein_coding	Hlf	utr3	ENSMUSG00000003949	NonProperStrand	25	chr19	8798484	8798534	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-6.9443
chr14	45949538	45949554	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	chr16	91729699	91729723	protein_coding	Itsn1	utr5	ENSMUSG00000022957	ProperStrand	172	1	-7.8170
chr17	32334147	32334212	protein_coding	Brd4	utr3	ENSMUSG00000024002	ProperStrand	121	chrX	100517086	100517102	protein_coding	Cdx4	exon	ENSMUSG00000031326	NonProperStrand	30	1	-13.3066
chr17	24787032	24787132	protein_coding	Slc9a3r2	utr5	ENSMUSG00000002504	ProperStrand	10	chr16	23110973	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.7978
chr7	24779190	24779213	SINE	ID_B1	B4	chr7ID_B124779183	NonProperStrand	54	chr11	80138362	80138378	protein_coding	Rhbdl3	intron	ENSMUSG00000017692	NonProperStrand	12	1	-16.8471
chr6	92104375	92104391	protein_coding	Nr2c2	exon	ENSMUSG00000005893	ProperStrand	101	chr7	4092683	4093653	protein_coding	Leng8	exon	ENSMUSG00000035545	ProperStrand	49	1	-12.6768
chr1	133252367	133252447	protein_coding	Srgap2	intron	ENSMUSG00000026425	ProperStrand	299	chr8	73419657	73419747	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-0.7092
chr6	113100993	113101093	protein_coding	Setd5	exon	ENSMUSG00000034269	ProperStrand	162	chr1	162967490	162967566	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	7	-13.8184
chr5	137438408	137438498	protein_coding-noncoding	Fis1	utr5	ENSMUSG00000019054	ProperStrand	1	chr5	137438150	137438240	protein_coding	Fis1	intron	ENSMUSG00000019054	ProperStrand	12	1	-inf
chr16	12360074	12360092	LTR	IAPLTR2b	ERVK	chr16IAPLTR2b12359785	NonProperStrand	28	chr4	3762713	3762742	protein_coding	Rps20	utr5	ENSMUSG00000028234	ProperStrand	71	1	-14.5154
chr8	13837567	13837583	protein_coding	AF366264	exon	ENSMUSG00000057116	ProperStrand	7	chr8	73419761	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-7.3719
chr15	88995691	88995707	protein_coding	Plxnb2	exon	ENSMUSG00000036606	ProperStrand	119	chr9	120037953	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-3.4194
chr4	120819071	120819161	protein_coding	Rlf	exon	ENSMUSG00000049878	ProperStrand	58	chr11	97642992	97643072	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.5298
chr19	11271200	11271217	protein_coding	Ms4a13	utr5	ENSMUSG00000057240	ProperStrand	59	chr4	132394364	132394417	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	1	-9.1715
chr11	50199314	50199357	protein_coding	Hnrnph1	utr3	ENSMUSG00000007850	ProperStrand	49	chr4	131908688	131908748	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-4.4474
chr9	48279612	48279629	protein_coding	Rexo2	intron	ENSMUSG00000032026	ProperStrand	11	chr17	35089183	35089209	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-8.9052
chr11	94418575	94418609	protein_coding	Acsf2	utr3	ENSMUSG00000076435	ProperStrand	34	chr5	111121066	111121099	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-7.5666
chr5	135132558	135132591	protein_coding	Limk1	utr3	ENSMUSG00000029674	ProperStrand	10	chr19	8963027	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-9.3759
chr2	34631733	34631823	protein_coding	Hspa5	utr3	ENSMUSG00000026864	ProperStrand	181	chr5	130300434	130300514	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-0.8740
chr8	74490969	74493165	protein_coding	Zfp961	intron	ENSMUSG00000052446	ProperStrand	35	chr16	23110967	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-2.9161
chr9	65699211	65699233	protein_coding	Trip4	exon	ENSMUSG00000032386	ProperStrand	6	chr8	73419657	73419775	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-7.7047
chr5	138741042	138741232	protein_coding	Stag3	exon	ENSMUSG00000036928	ProperStrand	53	chr2	129446263	129446331	protein_coding	Sirpa	intron	ENSMUSG00000037902	ProperStrand	5	1	-18.2550
chr2	143814617	143814656	protein_coding	Rrbp1	exon	ENSMUSG00000027422	ProperStrand	76	chr16	23110455	23110518	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-3.7265
chr17	46663594	46663610	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr5	151755616	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	2	-6.3687
chr16	43168348	43168373	protein_coding	Zbtb20	intron	ENSMUSG00000022708	ProperStrand	28	chr14	52799831	52799931	protein_coding	Supt16h	exon	ENSMUSG00000035726	ProperStrand	193	2	-19.2222
chr4	116313733	116314519	protein_coding	Akr1a1	exon	ENSMUSG00000028692	ProperStrand	35	chr2	130102060	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-6.4188
chr7	19737954	19738039	protein_coding	Snrpd2	utr3	ENSMUSG00000040824	ProperStrand	23	chr19	8963027	8963085	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.0031
chr15	103178127	103178187	protein_coding	Itga5	exon	ENSMUSG00000000555	ProperStrand	28	chr2	140081090	140082721	protein_coding	Sel1l2	exon	ENSMUSG00000074764	NonProperStrand	52	2	-19.3209
chr1	71692243	71692275	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr4	132394296	132394328	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	1	-3.7801
chr9	39882020	39882036	protein_coding	Olfr982	exon	ENSMUSG00000049010	NonProperStrand	35	chr19	8799829	8799876	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-6.0025
chr2	26768093	26768119	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	chr15	98350199	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-0.7344
chr13	14088107	14088124	protein_coding	B3galnt2	intron	ENSMUSG00000039242	NonProperStrand	4	chr5	115696923	115696958	protein_coding	Rnf10	exon	ENSMUSG00000041740	ProperStrand	95	1	-17.8524
chr8	87370632	87370722	protein_coding	Calr	utr5	ENSMUSG00000003814	ProperStrand	232	chr4	131866154	131866234	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-1.3960
chr2	51928482	51928562	protein_coding	Rif1	intron	ENSMUSG00000036202	ProperStrand	201	chr7	117189969	117190059	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	9	-16.2702
chr17	86400888	86400904	protein_coding	Srbd1	utr5	ENSMUSG00000024135	ProperStrand	16	chr9	120039550	120039604	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-5.8660
chr18	48207089	48207189	protein_coding	Gm5506	exon	ENSMUSG00000059040	ProperStrand	105	chr5	130300497	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.6068
chr4	147430818	147430898	protein_coding	Mthfr	utr3	ENSMUSG00000029009	ProperStrand	19	chr8	73419657	73419747	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-5.3188
chr17	35386028	35386071	protein_coding-noncoding	Ddx39b	utr5	ENSMUSG00000019432	ProperStrand	7	chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	1	-16.0904
chr16	23110455	23110535	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	chr9	40611662	40611752	snoRNA	ENSMUSG00000075876_Snord14c	.	ENSMUSG00000075876	ProperStrand	104	1	-1.5791
chr3	134914505	134914524	protein_coding	Cenpe	exon	ENSMUSG00000045328	ProperStrand	71	chr19	8800085	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	2	-11.6742
chr4	131866155	131866235	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	chr6	71832577	71832667	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	23	-6.7052
chr16	23111774	23111840	protein_coding	Eif4a2	intron	ENSMUSG00000022884	ProperStrand	356	chr4	148524660	148524760	protein_coding	Pgd	utr3	ENSMUSG00000028961	ProperStrand	34	1	-10.8919
chr6	83111671	83111687	protein_coding	1700003E16Rik	exon	ENSMUSG00000030030	ProperStrand	352	chr9	15118322	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-0.7338
chr17	66252494	66252594	SINE	B3	B2	chr17B366252460	ProperStrand	1	chr17	35087895	35087923	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-inf
chr1	62968945	62968966	LINE	Lx8	L1	chr1Lx862968712	ProperStrand	1	chr16	23110962	23110999	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr9	118719001	118719018	protein_coding	Itga9	intron	ENSMUSG00000039115	NonProperStrand	11	chr19	8963137	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.4574
chr17	39985195	39985259	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr2	26766801	26766855	snoRNA	ENSMUSG00000065258_SNORD24	.	ENSMUSG00000065258	ProperStrand	130	6	-20.5263
chr9	45647018	45647077	protein_coding	Bace1	utr5	ENSMUSG00000032086	ProperStrand	12	chr5	130300533	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-9.1930
chrX	100767009	100767025	non_coding	B230206F22Rik	.	ENSMUSG00000086370	NonProperStrand	20	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-8.0393
chr7	73215049	73215495	protein_coding	Snrpa1	exon	ENSMUSG00000030512	ProperStrand	71	chr10	23505190	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-2.0063
chr2	144087382	144087449	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	chr16	32243797	32243843	snoRNA	ENSMUSG00000080440_SNORA79	.	ENSMUSG00000080440	ProperStrand	140	1	-4.8898
chr5	37186661	37187818	protein_coding	Mrfap1	exon	ENSMUSG00000055302	ProperStrand	62	chr16	23111391	23111505	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-5.3593
chr8	3614249	3614265	protein_coding	Xab2	exon	ENSMUSG00000019470	ProperStrand	52	chr2	145077957	145209255	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-8.0095
chr3	108187204	108187294	protein_coding-noncoding	Psrc1	utr5	ENSMUSG00000068744	ProperStrand	6	chr3	108187154	108187234	protein_coding	Psrc1	utr5	ENSMUSG00000068744	ProperStrand	38	1	-18.2115
chr1	182742005	182742052	protein_coding	H3f3a	exon	ENSMUSG00000060743	ProperStrand	46	chr18	35716862	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.6197
chr4	147257814	147259613	protein_coding	Mfn2	exon	ENSMUSG00000029020	ProperStrand	8	chr7	19650911	19650928	protein_coding	Rsph6a	exon	ENSMUSG00000040866	ProperStrand	12	3	-19.9701
chr1	95304246	95304346	protein_coding	Hdlbp	utr3	ENSMUSG00000034088	ProperStrand	97	chr15	79913293	79913346	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.7278
chr2	30112850	30117408	protein_coding	Lrrc8a	exon	ENSMUSG00000007476	ProperStrand	17	chr19	8799860	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-7.4535
chr8	73033119	73033209	protein_coding	Uba52	intron	ENSMUSG00000090137	ProperStrand	37	chr7	117166722	117166802	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-5.7595
chr1	125112239	125112256	LINE	L1_Mm	L1	chr1L1_Mm125111699	ProperStrand	1	chr17	27222079	27223793	protein_coding	Itpr3	exon	ENSMUSG00000042644	ProperStrand	137	1	-inf
chr5	121800538	121800554	protein_coding	Gm15800	exon	ENSMUSG00000042744	ProperStrand	47	chr8	73419660	73419712	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.5766
chr10	90582452	90582492	protein_coding-noncoding	Slc25a3	utr3	ENSMUSG00000061904	ProperStrand	13	chr4	149990055	149990130	protein_coding	Rere	exon	ENSMUSG00000039852	ProperStrand	76	3	-20.5996
chr7	52958453	52958469	protein_coding	Car11	exon	ENSMUSG00000003273	NonProperStrand	250	chr16	4068892	4068932	protein_coding	Trap1	exon	ENSMUSG00000005981	ProperStrand	25	1	-12.2230
chr3	104814138	104814163	protein_coding	Cttnbp2nl	exon	ENSMUSG00000062127	ProperStrand	15	chr1	162966818	162966866	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	3	-inf
chr2	164597426	164597532	protein_coding	Ube2c	exon	ENSMUSG00000001403	ProperStrand	40	chrX	34622915	34622943	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-6.6164
chr1	88423481	88423522	protein_coding	Ptma	exon	ENSMUSG00000026238	ProperStrand	385	chr7	150644271	150644287	protein_coding	Cdkn1c	utr3	ENSMUSG00000037664	NonProperStrand	9	1	-13.4793
chr1	120807433	120807520	protein_coding	Gli2	intron	ENSMUSG00000048402	ProperStrand	148	chrX	34622906	34622968	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-1.6575
chr9	82799355	82800562	protein_coding	Phip	exon	ENSMUSG00000032253	ProperStrand	43	chr17	56434472	56434493	protein_coding	Arrdc5	intron	ENSMUSG00000073380	ProperStrand	2	1	-inf
chr19	43574587	43574669	protein_coding	Got1	utr3	ENSMUSG00000025190	ProperStrand	32	chr4	55063069	55063096	protein_coding	Zfp462	exon	ENSMUSG00000060206	ProperStrand	37	2	-20.2021
chr11	94982073	94982090	protein_coding	Dlx3	intron	ENSMUSG00000001510	ProperStrand	3	chr18	73693168	73693188	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-11.8459
chr13	107737212	107737228	protein_coding	Dimt1	utr5	ENSMUSG00000021692	ProperStrand	185	chr1	162965531	162965569	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.4152
chr2	179322379	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr7	150717298	150717374	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	2	-5.9682
chr17	24856672	24856762	antisense	Snhg9	.	ENSMUSG00000090101	ProperStrand	218	chr18	37887155	37887214	protein_coding	Pcdhga9	exon	ENSMUSG00000023036	ProperStrand	245	10	-inf
chr11	63885336	63887052	protein_coding	Cox10	exon	ENSMUSG00000042148	NonProperStrand	187	chr9	15119968	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-5.0219
chr18	46768037	46768068	protein_coding	Eif1a	utr3	ENSMUSG00000057561	ProperStrand	44	chr10	23505152	23505202	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.6830
chr15	79560594	79560679	protein_coding	Sun2	exon	ENSMUSG00000042524	ProperStrand	13	chr9	15119646	15119736	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.5260
chr5	102359980	102360021	protein_coding	Wdfy3	exon	ENSMUSG00000043940	ProperStrand	45	chr16	35932620	35932636	protein_coding	Dtx3l	exon	ENSMUSG00000049502	ProperStrand	152	1	-12.0283
chr10	84284689	84284705	protein_coding	Rfx4	intron	ENSMUSG00000020037	NonProperStrand	10	chr7	117189863	117189922	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-9.8452
chr6	120843806	120843842	protein_coding	Bid	utr3	ENSMUSG00000004446	ProperStrand	6	chr1	88252837	88252902	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-11.3791
chr16	91227718	91227735	protein_coding	Olig2	utr3	ENSMUSG00000039830	NonProperStrand	78	chr9	120038555	120038670	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-4.5283
chr1	137051339	137051867	protein_coding	Arl8a	utr3	ENSMUSG00000026426	ProperStrand	12	chr7	118219581	118219661	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-7.3600
chr7	29605669	29605745	protein_coding	Hnrnpl	exon	ENSMUSG00000015165	ProperStrand	150	chr18	73693169	73693186	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-3.7729
chr17	45707642	45707694	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr7	51870844	51870861	protein_coding	Myh14	exon	ENSMUSG00000030739	ProperStrand	29	1	-8.1852
chr7	13516163	13516200	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr19	8799835	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	3	-3.2041
chr2	90235286	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	162965980	162966046	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	28	-2.3333
chr4	117884349	117884449	protein_coding	Ptprf	exon	ENSMUSG00000033295	ProperStrand	337	chr15	5068427	5068480	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-2.8136
chr13	55103835	55103851	protein_coding	Unc5a	exon	ENSMUSG00000025876	NonProperStrand	96	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.4482
chr17	95160907	95218242	protein_coding	2610044O15Rik	exon	ENSMUSG00000066057	NonProperStrand	70	chr16	23110890	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	8	-6.1020
chr1	36161314	36161353	protein_coding	Hs6st1	utr3	ENSMUSG00000045216	ProperStrand	63	chr17	42930952	42931052	protein_coding	Cd2ap	utr3	ENSMUSG00000061665	ProperStrand	44	1	-13.8440
chr8	125096479	125096533	protein_coding	Cdt1	exon	ENSMUSG00000006585	ProperStrand	47	chr7	117189957	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.7835
chr7	53339260	53339276	protein_coding	Nomo1	utr3	ENSMUSG00000030835	ProperStrand	85	chr9	85738159	85738175	protein_coding	Tpbg	exon	ENSMUSG00000035274	ProperStrand	8	1	-16.6735
chr11	101436594	101436614	protein_coding	Nbr1	exon	ENSMUSG00000017119	ProperStrand	91	chr15	98604924	98606960	protein_coding	Wnt10b	exon	ENSMUSG00000022996	NonProperStrand	189	2	-16.0439
chr5	36862018	36863119	protein_coding	Tbc1d14	exon	ENSMUSG00000029192	ProperStrand	25	chr11	69481333	69481381	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-4.8537
chr11	69483136	69483194	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	chr18	35100930	35100954	snoRNA	ENSMUSG00000089239_SNORD63	.	ENSMUSG00000089239	ProperStrand	18	1	-4.6750
chr11	82477942	82477967	LTR	RLTR26	ERVK	chr11RLTR2682477926	ProperStrand	1	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr11	116558517	116558607	LTR	LTR40a	ERVL	chr11LTR40a116558513	NonProperStrand	1	chr11	97642991	97643071	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-inf
chr4	155280942	155280989	protein_coding	Acap3	utr3	ENSMUSG00000029033	ProperStrand	3	chr5	121655017	121655107	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-9.9796
chr11	60370927	60370943	protein_coding	Alkbh5	utr3	ENSMUSG00000042650	ProperStrand	203	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-1.5317
chr11	120824919	120825020	protein_coding	Csnk1d	utr3	ENSMUSG00000025162	ProperStrand	37	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	8	-19.6786
chr2	166890504	166890552	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	chr5	74489574	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	11	-6.7342
chr3	132337730	132337812	protein_coding	Aimp1	exon	ENSMUSG00000028029	ProperStrand	4	chr2	166890544	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-13.2238
chr17	47928467	47928484	protein_coding	Tfeb	exon	ENSMUSG00000023990	ProperStrand	78	chr11	77995189	77995239	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-5.6672
chr1	180261255	180261277	protein_coding	Hnrnpu	exon	ENSMUSG00000039630	ProperStrand	286	chr2	152771639	152771657	protein_coding	Dusp15	intron	ENSMUSG00000042662	ProperStrand	17	1	-12.7464
chrX	140770711	140770801	protein_coding-noncoding	Alg13	utr5	ENSMUSG00000041718	ProperStrand	87	chrX	140756636	140770677	protein_coding	Alg13	exon	ENSMUSG00000041718	ProperStrand	45	7	-21.0606
chr6	22256882	22256950	protein_coding	Fam3c	utr3	ENSMUSG00000029672	ProperStrand	13	chr4	131908710	131908800	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.8088
chr3	94778661	94778678	protein_coding	Pi4kb	utr5	ENSMUSG00000038861	NonProperStrand	18	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-7.3571
chr2	153050783	153050799	protein_coding	Tspyl3	exon	ENSMUSG00000074671	ProperStrand	228	chr5	108336378	108336483	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-2.4341
chr16	5037110	5047836	protein_coding	Glyr1	exon	ENSMUSG00000022536	ProperStrand	60	chr7	148634697	148634787	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-6.7050
chr11	48615775	48615806	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	chr14	31827510	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-3.5621
chr11	6303206	6303226	protein_coding	Zmiz2	exon	ENSMUSG00000041164	ProperStrand	69	chr14	76247711	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-6.5837
chr7	136800631	136800649	SINE	RSINE1	B4	chr7RSINE1136800606	ProperStrand	216	chr5	130555368	130555384	protein_coding	Tpst1	utr5	ENSMUSG00000034118	ProperStrand	22	1	-12.7767
chr10	94151578	94151595	protein_coding	Ccdc41	utr5	ENSMUSG00000020024	NonProperStrand	34	chr5	108334195	108334240	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-5.9306
chr14	124026090	124026107	protein_coding	Nalcn	utr5	ENSMUSG00000000197	NonProperStrand	12	chr19	45225770	45225787	protein_coding	Tlx1	exon	ENSMUSG00000025215	NonProperStrand	12	1	-19.9071
chr18	24796916	24796960	protein_coding	Elp2	exon	ENSMUSG00000024271	ProperStrand	46	chr9	120038571	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.5226
chr16	91729698	91729723	protein_coding	Itsn1	utr5	ENSMUSG00000022957	ProperStrand	172	chr4	85016349	85016365	protein_coding	Sh3gl2	intron	ENSMUSG00000028488	NonProperStrand	313	1	-7.8978
chr2	111599639	111599663	LINE	Lx8	L1	chr2Lx8111599225	ProperStrand	1	chr4	122968672	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-inf
chr7	52309977	52309993	protein_coding	Prrg2	exon	ENSMUSG00000007837	NonProperStrand	281	chr8	106879045	106879070	protein_coding	Cmtm4	exon	ENSMUSG00000051578	ProperStrand	6	1	-14.9769
chr16	85103496	85103533	protein_coding	App	exon	ENSMUSG00000022892	ProperStrand	11	chr2	156784210	156795801	protein_coding	Ndrg3	exon	ENSMUSG00000027634	ProperStrand	16	1	-19.2002
chr8	77651383	77651455	protein_coding	Mcm5	utr3	ENSMUSG00000005410	ProperStrand	199	chr11	101321087	101321115	protein_coding	Vat1	utr3	ENSMUSG00000034993	ProperStrand	69	2	-16.6998
chr8	85784890	85784995	protein_coding	Tbc1d9	exon	ENSMUSG00000031709	ProperStrand	66	chr9	120038635	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.8695
chr10	25221881	25221976	protein_coding	Epb4.1l2	utr3	ENSMUSG00000019978	ProperStrand	105	chr9	15119711	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.7125
chr2	162760002	162760192	protein_coding	Srsf6	exon	ENSMUSG00000016921	ProperStrand	30	chr6	86917324	86945870	protein_coding	Aak1	exon	ENSMUSG00000057230	ProperStrand	22	11	-inf
chr3	153575137	153575166	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	chr1	137281676	137281768	protein_coding	Ipo9	utr3	ENSMUSG00000041879	ProperStrand	53	1	-8.7440
chr18	41356151	41356184	miRNA	Mir5097	dead	ENSMUSG00000093361	ProperStrand	221	chr7	117189864	117189943	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-3.7047
chr4	62978525	62978541	protein_coding	Col27a1	exon	ENSMUSG00000045672	ProperStrand	32	chr16	23110873	23110889	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.9664
chr2	90235286	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr13	8976628	8976652	protein_coding	Gtpbp4	exon	ENSMUSG00000021149	ProperStrand	26	1	-6.0972
chr7	108986149	108986183	protein_coding	Inppl1	intron	ENSMUSG00000032737	ProperStrand	272	chr12	106269287	106269387	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-1.5349
chr5	31500847	31500937	protein_coding	Snx17	utr3	ENSMUSG00000029146	ProperStrand	5	chr3	123210899	123210979	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-6.8746
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr7	52754214	52755189	protein_coding	Nucb1	exon	ENSMUSG00000030824	ProperStrand	49	1	-8.3800
chr9	15119310	15119400	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	chr5	130295414	130295500	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	12	-3.9657
chrX	71546664	71546754	protein_coding	Atp6ap1	intron	ENSMUSG00000019087	ProperStrand	11	chr4	116862551	116862631	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	1	-12.3049
chr13	23647225	23647325	protein_coding	Hist1h1d	exon	ENSMUSG00000052565	ProperStrand	78	chr1	162968213	162968291	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-6.2975
chr15	96529849	96529893	protein_coding	Slc38a2	utr5	ENSMUSG00000022462	ProperStrand	133	chr6	47225593	47225609	protein_coding	Cntnap2	intron	ENSMUSG00000039419	NonProperStrand	283	1	-8.6101
chr6	142977758	142978174	protein_coding	5730419I09Rik	exon	ENSMUSG00000030279	ProperStrand	81	chr19	8800377	8800457	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-2.9858
chr2	26493362	26493384	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr6	131330291	131330339	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	ProperStrand	408	3	-6.7631
chr2	157119950	157147553	protein_coding	Rpn2	exon	ENSMUSG00000027642	ProperStrand	363	chr7	116664794	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	4	-1.8943
chr17	23955819	23955838	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	chr2	158182156	158182200	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-3.2793
chr18	34625366	34625422	protein_coding	Fam13b	intron	ENSMUSG00000036501	ProperStrand	30	chr5	115939533	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-9.2593
chr4	125385567	125390994	protein_coding	Grik3	utr3	ENSMUSG00000001985	ProperStrand	126	chr9	120038576	120038657	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	4	-7.0087
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	2	-4.4301
chr15	36538307	36538383	protein_coding	Pabpc1	utr5	ENSMUSG00000022283	ProperStrand	908	chr9	120040549	120040587	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	1	-4.1881
chr17	45707489	45707666	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr5	143667050	143667113	protein_coding	Actb	exon	ENSMUSG00000029580	ProperStrand	446	1	-2.9144
chr11	107854698	107854717	protein_coding	Prkca	intron	ENSMUSG00000050965	ProperStrand	48	chr5	130295414	130295475	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	2	-9.2900
chr16	11144103	11144203	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr11	62418026	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	NonProperStrand	7	1	-14.8880
chr12	111875775	111876951	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr16	55966544	55966732	protein_coding	Rpl24	exon	ENSMUSG00000022601	ProperStrand	149	1	-6.7431
chr11	77678965	77679023	protein_coding	Myo18a	utr3	ENSMUSG00000000631	ProperStrand	124	chr5	34072485	34072575	protein_coding	Fgfr3	intron	ENSMUSG00000054252	ProperStrand	13	1	-14.9728
chr18	45718263	45718280	protein_coding	Kcnn2	intron	ENSMUSG00000054477	ProperStrand	26	chr16	43886880	43886929	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	1	-9.7607
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr19	9018593	9020258	protein_coding	Mta2	exon	ENSMUSG00000071646	ProperStrand	70	1	-8.4071
chr11	115708331	115708359	protein_coding	Llgl2	exon	ENSMUSG00000020782	ProperStrand	62	chr10	23505152	23505252	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-2.3053
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	126486853	126486871	protein_coding	Cyp27b1	exon	ENSMUSG00000006724	ProperStrand	3	1	-10.7414
chr12	111902825	111902925	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr8	113362433	113362486	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	1	-4.5813
chr16	52863106	52863196	LTR	MT2A	ERVL	chr16MT2A52862997	ProperStrand	1	chr16	52863264	52863354	LTR	RMER17C	ERVK	chr16RMER17C52863229	NonProperStrand	1	1	-inf
chr14	119125174	119125191	LTR	MLT1F2	MaLR	chr14MLT1F2119124966	ProperStrand	4	chr10	67560895	67560937	protein_coding	Arid5b	exon	ENSMUSG00000019947	ProperStrand	43	1	-19.1191
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr15	101912446	101912518	protein_coding	Eif4b	exon	ENSMUSG00000058655	ProperStrand	484	1	-4.6113
chr12	29316526	29319174	protein_coding	Rps7	exon	ENSMUSG00000061477	ProperStrand	129	chr5	121655016	121655154	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-4.2167
chr2	28368846	28368862	protein_coding	Ralgds	utr5	ENSMUSG00000026821	ProperStrand	14	chr4	131908371	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.9265
chr1	33828651	33828669	protein_coding	Zfp451	intron	ENSMUSG00000042197	NonProperStrand	393	chr14	31827480	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-3.3352
chr15	102110890	102110906	protein_coding	Mfsd5	exon	ENSMUSG00000045665	NonProperStrand	3	chr11	62416603	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-11.4760
chr4	86500724	86500749	protein_coding	Rps6	exon	ENSMUSG00000028495	ProperStrand	263	chr6	143813837	143813853	protein_coding	Sox5	intron	ENSMUSG00000041540	NonProperStrand	49	1	-10.7587
chr11	84722945	84722961	protein_coding	Myo19	exon	ENSMUSG00000020527	NonProperStrand	2	chr4	140261673	140261756	protein_coding	Rcc2	intron	ENSMUSG00000040945	NonProperStrand	1	1	-inf
chr8	4349838	4353916	protein_coding	Ccl25	exon	ENSMUSG00000023235	ProperStrand	10	chr16	23111423	23111503	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.3721
chr17	56744796	56744814	protein_coding	Safb	utr3	ENSMUSG00000071054	ProperStrand	79	chr10	110918600	110918690	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-2.9516
chr19	29686954	29686970	protein_coding	Ermp1	utr3	ENSMUSG00000046324	NonProperStrand	7	chr10	106266059	106266075	protein_coding	Ppfia2	exon	ENSMUSG00000053825	ProperStrand	20	1	-19.1455
chr17	46373946	46375347	protein_coding	Xpo5	exon	ENSMUSG00000067150	ProperStrand	31	chr1	162966234	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-8.9023
chr17	23961933	23964524	protein_coding	Tceb2	exon	ENSMUSG00000055839	ProperStrand	12	chr11	69483136	69483181	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-5.4834
chr19	45016367	45016400	protein_coding	Fam178a	exon	ENSMUSG00000036097	ProperStrand	29	chr9	120038564	120038672	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.3936
chr6	118980975	118980999	protein_coding	Cacna1c	intron	ENSMUSG00000051331	ProperStrand	46	chr15	79908984	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-5.9944
chr7	87460945	87461025	protein_coding	Prc1	utr3	ENSMUSG00000038943	ProperStrand	35	chr5	111121109	111121199	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-7.5085
chr17	34171140	34172608	protein_coding	Rxrb	exon	ENSMUSG00000039656	ProperStrand	34	chr17	24857716	24857775	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.2959
chr12	89590110	89590200	LTR	MMERVK10C-int	ERVK	chr12MMERVK10C-int89586181	NonProperStrand	1	chr2	131743769	131743849	protein_coding-noncoding	Prnp	utr5	ENSMUSG00000079037	NonProperStrand	2	1	-inf
chr2	26493412	26493518	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr9	40612445	40612583	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	6	-10.2461
chr9	78023152	78023183	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-1.0178
chr4	117950059	117957395	protein_coding	Ptprf	utr5	ENSMUSG00000033295	ProperStrand	337	chr5	14252800	14252816	protein_coding	Sema3e	utr3	ENSMUSG00000063531	ProperStrand	125	1	-8.3863
chr9	26440743	26440759	DNA	MER5A	MER1_type	chr9MER5A26440741	ProperStrand	108	chr17	35087945	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-4.0749
chrX	148637268	148637358	protein_coding	Iqsec2	intron	ENSMUSG00000041115	ProperStrand	9	chr19	8963026	8963082	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	5	-22.1957
chr15	26380937	26380958	LINE	Lx7	L1	chr15Lx726380154	NonProperStrand	5	chr15	82686577	82686677	protein_coding	Tcf20	exon	ENSMUSG00000041852	ProperStrand	658	5	-inf
chr9	20693933	20694001	snoRNA	ENSMUSG00000077702_SNORD105	.	ENSMUSG00000077702	ProperStrand	41	chr5	92485086	92485186	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	1	-9.5049
chr2	90235304	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	38577350	38577366	protein_coding	Klrg2	utr3	ENSMUSG00000071537	NonProperStrand	37	3	-12.6492
chr11	72262437	72262606	protein_coding	Mybbp1a	exon	ENSMUSG00000040463	ProperStrand	279	chr8	98269959	98270049	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-2.6735
chr11	23264428	23264472	protein_coding	Usp34	exon	ENSMUSG00000056342	ProperStrand	68	chr7	117189999	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-5.3505
chr15	79913288	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr17	13173718	13173771	protein_coding	Wtap	exon	ENSMUSG00000060475	ProperStrand	119	2	-4.2086
chr7	19590197	19590213	protein_coding	Irf2bp1	exon	ENSMUSG00000044030	NonProperStrand	81	chr4	131908689	131908750	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.8446
chr5	124824250	124824292	protein_coding	Sbno1	utr3	ENSMUSG00000038095	ProperStrand	134	chr7	52382752	52382827	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-5.1760
chr11	115359173	115359220	protein_coding	Hn1	utr3	ENSMUSG00000020737	ProperStrand	18	chr17	24497192	24497209	protein_coding	Abca3	intron	ENSMUSG00000024130	ProperStrand	20	2	-19.0730
chr6	28470220	28473771	protein_coding	Snd1	utr5	ENSMUSG00000001424	ProperStrand	210	chrX	34622936	34623024	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-1.1603
chr1	95310160	95310187	protein_coding	Hdlbp	exon	ENSMUSG00000034088	ProperStrand	97	chr19	27473389	27473494	protein_coding	D19Bwg1357e	exon	ENSMUSG00000041360	ProperStrand	110	2	-17.7604
chr8	88043397	88043497	protein_coding	Gpt2	exon	ENSMUSG00000031700	ProperStrand	32	chr2	26493366	26493414	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	6	-22.7500
chr16	4545228	4545328	protein_coding	Tfap4	utr3	ENSMUSG00000005718	ProperStrand	15	chr16	23111447	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-6.1656
chr3	83966926	83967016	protein_coding	Trim2	utr3	ENSMUSG00000027993	ProperStrand	10	chr16	23110909	23110991	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-5.0079
chr5	136707644	136707662	protein_coding	Sh2b2	exon	ENSMUSG00000005057	NonProperStrand	101	chr2	30820237	30820332	protein_coding	Tor1a	intron	ENSMUSG00000026849	ProperStrand	8	1	-16.3966
chr15	31422517	31425805	protein_coding	March6	exon	ENSMUSG00000039100	ProperStrand	94	chr16	23110902	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-2.3833
chr7	117418231	117418295	protein_coding	Swap70	exon	ENSMUSG00000031015	ProperStrand	47	chr1	173433203	173433293	protein_coding	B930036N10Rik	utr3	ENSMUSG00000091993	ProperStrand	150	1	-11.9678
chr5	116468057	116468147	protein_coding-noncoding	Prkab1	utr3	ENSMUSG00000029513	ProperStrand	1	chrX	34622940	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-inf
chrX	103395897	103395926	protein_coding	Pgk1	intron	ENSMUSG00000062070	ProperStrand	484	chr14	31827477	31827544	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-2.9623
chr4	109619441	109619505	protein_coding	Faf1	intron	ENSMUSG00000010517	ProperStrand	29	chr16	23110902	23110992	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0921
chr15	39673474	39673490	protein_coding	Dpys	exon	ENSMUSG00000022304	ProperStrand	27	chr2	26494708	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-7.6776
chr14	31989972	31990062	protein_coding	Nisch	exon	ENSMUSG00000021910	ProperStrand	125	chr7	117166770	117166850	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-3.4344
chr4	139007177	139007680	protein_coding	Ubr4	exon	ENSMUSG00000066036	ProperStrand	304	chr9	64023713	64023746	snoRNA	ENSMUSG00000064918_SNORD18	.	ENSMUSG00000064918	ProperStrand	370	7	-20.4511
chr14	20598013	20598076	protein_coding	Nid2	exon	ENSMUSG00000021806	ProperStrand	372	chr2	153034488	153034531	protein_coding	Tm9sf4	utr3	ENSMUSG00000068040	ProperStrand	27	2	-17.7842
chr6	137683768	137683784	protein_coding	Strap	utr5	ENSMUSG00000030224	ProperStrand	27	chr11	6428121	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.6948
chr15	101924105	101926759	protein_coding	Eif4b	utr3	ENSMUSG00000058655	ProperStrand	484	chr3	123210854	123210978	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	5	-0.9700
chr17	46381984	46382084	protein_coding	Polr1c	exon	ENSMUSG00000067148	ProperStrand	58	chr7	116663732	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.5700
chr7	13507707	13512032	protein_coding	Rps5	utr5	ENSMUSG00000012848	ProperStrand	108	chr11	97642952	97643075	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-4.4569
chr8	23281209	23281299	protein_coding	Ckap2	intron	ENSMUSG00000037725	ProperStrand	69	chr4	131865873	131865953	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.5558
chr18	61715448	61715495	protein_coding	Csnk1a1	exon	ENSMUSG00000024576	ProperStrand	64	chr7	29136526	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	8	-18.8385
chr13	46862888	46862969	snoRNA	ENSMUSG00000064558_SNORA55	.	ENSMUSG00000064558	ProperStrand	187	chr17	13112450	13112529	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-2.5033
chr13	23787891	23787944	protein_coding	Hist1h1t	exon	ENSMUSG00000036211	ProperStrand	2	chr16	23111452	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-8.0851
chr7	13593245	13593262	protein_coding	Zbtb45	exon	ENSMUSG00000049600	ProperStrand	16	chr4	131908302	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-12.5423
chr8	123029790	123029807	protein_coding	Gse1	intron	ENSMUSG00000031822	ProperStrand	97	chr5	65780786	65780835	protein_coding	Rpl9	exon	ENSMUSG00000047215	ProperStrand	113	1	-11.0769
chr2	25078081	25078116	protein_coding	Tubb4b	exon	ENSMUSG00000036752	ProperStrand	58	chr7	117189991	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	3	-8.4994
chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	5	-9.2067
chrX	46419572	46419593	protein_coding	Enox2	intron	ENSMUSG00000031109	ProperStrand	29	chr7	117189918	117190018	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.7044
chr5	122907547	122908109	protein_coding	Atp2a2	exon	ENSMUSG00000029467	ProperStrand	166	chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-4.4754
chr11	120650650	120650666	protein_coding	Dus1l	utr3	ENSMUSG00000025155	NonProperStrand	4	chr4	131908687	131908750	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-6.2660
chr7	117422712	117422812	protein_coding	Swap70	exon	ENSMUSG00000031015	ProperStrand	47	chr13	22127714	22127735	protein_coding	Hist1h2bk	utr5	ENSMUSG00000062727	ProperStrand	16	1	-16.5268
chr10	79518797	79518958	protein_coding	Gpx4	exon	ENSMUSG00000075706	ProperStrand	55	chr16	23110968	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-0.9304
chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	chr1	63225253	63225284	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	1	-5.6366
chr14	79689100	79689118	protein_coding	1190002H23Rik	intron	ENSMUSG00000022018	NonProperStrand	6	chr9	120038492	120038529	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-12.4606
chr5	116046874	116046974	protein_coding	Gcn1l1	exon	ENSMUSG00000041638	ProperStrand	408	chr9	64024540	64024567	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	15	-18.8735
chr14	55476645	55476661	protein_coding	Homez	exon	ENSMUSG00000057156	NonProperStrand	127	chr11	6428109	6428156	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.9123
chr3	96429003	96429053	protein_coding	Lix1l	utr3	ENSMUSG00000049288	ProperStrand	5	chr16	23111695	23111785	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-6.6731
chr1	89346268	89346370	protein_coding	Gigyf2	utr3	ENSMUSG00000048000	ProperStrand	128	chr9	15119736	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.4192
chr8	95648443	95648459	protein_coding	Ces1c	exon	ENSMUSG00000057400	ProperStrand	2	chr7	29136536	29136593	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-9.5181
chr4	34978278	34978295	protein_coding	Mob3b	intron	ENSMUSG00000073910	NonProperStrand	7	chr18	73693112	73693138	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-9.9039
chr2	125772555	125772572	protein_coding	Galk2	exon	ENSMUSG00000027207	ProperStrand	2	chr6	71832644	71832687	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-13.0331
chr9	108465970	108465995	protein_coding	Impdh2	exon	ENSMUSG00000062867	ProperStrand	74	chr17	13112509	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	4	-13.4536
chr6	113027358	113027379	protein_coding	Setd5	utr5	ENSMUSG00000034269	ProperStrand	162	chr18	33954816	33954891	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-1.8012
chr6	92128753	92133861	protein_coding	Mrps25	exon	ENSMUSG00000014551	ProperStrand	5	chr17	24665420	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-10.0405
chr5	29895935	29895951	protein_coding	Ube3c	utr5	ENSMUSG00000039000	ProperStrand	48	chr17	39985205	39985285	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	4	-18.5399
chr14	99712376	99712429	protein_coding	Klf5	exon	ENSMUSG00000005148	ProperStrand	39	chr8	73419657	73419712	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.9253
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr13	54723202	54723218	protein_coding	Faf2	exon	ENSMUSG00000025873	ProperStrand	90	1	-5.1123
chr7	10843615	10843633	LTR	RLTR20B3	ERVK	chr7RLTR20B310843440	ProperStrand	1	chr16	57391601	57391723	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	1	-inf
chrX	13269163	13269180	protein_coding	Cask	intron	ENSMUSG00000031012	ProperStrand	41	chr19	8963027	8963084	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.9336
chr10	127521198	127521262	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	chr2	130101270	130101310	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	3	-6.2553
chr1	152268927	152269668	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	chr8	120116031	120116066	protein_coding	Plcg2	intron	ENSMUSG00000034330	ProperStrand	57	1	-9.0111
chr9	40139865	40139965	protein_coding	Gramd1b	intron	ENSMUSG00000040111	ProperStrand	40	chr17	35299566	35299632	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-5.5666
chr4	125748663	125748680	protein_coding	Oscp1	intron	ENSMUSG00000042616	ProperStrand	6	chr3	68889026	68889126	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-7.8444
chr9	78023104	78023194	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr13	54763043	54763131	protein_coding	Faf2	utr3	ENSMUSG00000025873	ProperStrand	90	1	-5.0868
chr13	21988804	21988833	miRNA	Mir1983	.	ENSMUSG00000088148	ProperStrand	23	chr1	162968441	162968461	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	2	-12.8079
chr2	89368461	89368478	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	chr1	129228402	129228492	snoRNA	ENSMUSG00000093146_AC131793.1	.	ENSMUSG00000093146	ProperStrand	119	1	-8.9858
chr11	77994801	77994864	snoRNA	ENSMUSG00000064540_Snord42a	.	ENSMUSG00000064540	ProperStrand	142	chr14	33005065	33005138	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	5	-11.3735
chr3	98125225	98125242	protein_coding	Phgdh	exon	ENSMUSG00000053398	NonProperStrand	6	chr12	17553062	17553087	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-9.7905
chr10	79174343	79174433	protein_coding	Bsg	utr3	ENSMUSG00000023175	ProperStrand	107	chr1	133252345	133252425	protein_coding	Srgap2	intron	ENSMUSG00000026425	ProperStrand	299	1	-8.9349
chr5	100976512	100976542	protein_coding	Cops4	utr3	ENSMUSG00000035297	ProperStrand	8	chr3	68889049	68889149	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-7.2271
chr2	130103435	130103500	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	chr5	130295428	130295521	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	5	-5.4944
chr1	194571819	194571881	snRNA	ENSMUSG00000064881_U5	.	ENSMUSG00000064881	ProperStrand	187	chr1	89681244	89681334	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-3.2904
chr8	109177815	109180748	protein_coding	Cdh1	exon	ENSMUSG00000000303	ProperStrand	283	chr12	21274407	21274423	protein_coding	Asap2	utr3	ENSMUSG00000052632	ProperStrand	45	1	-10.7839
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr11	68067261	68067277	protein_coding	Ntn1	intron	ENSMUSG00000020902	NonProperStrand	194	2	-10.3240
chr13	38738140	38746925	protein_coding	Eef1e1	exon	ENSMUSG00000001707	ProperStrand	7	chr7	52381973	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	2	-17.6189
chr6	125112684	125112862	protein_coding	Gapdh	exon	ENSMUSG00000057666	ProperStrand	356	chr11	51551290	51551380	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	2	-7.0489
chr19	53406810	53406826	protein_coding	Mxi1	intron	ENSMUSG00000025025	ProperStrand	51	chr9	70960076	70960092	protein_coding	Aqp9	exon	ENSMUSG00000032204	NonProperStrand	118	1	-12.2830
chr8	77593657	77593673	protein_coding	Tom1	utr3	ENSMUSG00000042870	ProperStrand	30	chr17	88049770	88049825	protein_coding	Epcam	utr3	ENSMUSG00000045394	ProperStrand	43	1	-15.3999
chr9	63868722	63868738	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	chr6	135028845	135028880	protein_coding	Gprc5a	exon	ENSMUSG00000046733	ProperStrand	7	1	-13.0093
chr1	72272879	72273011	snRNA	ENSMUSG00000075752_U2	.	ENSMUSG00000075752	ProperStrand	535	chr7	117189932	117190056	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	10	-9.2804
chr1	140235877	140235897	SINE	B4	B4	chr1B4140235690	ProperStrand	1	chr7	148634701	148634746	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-inf
chr17	28024627	28026986	protein_coding	Uhrf1bp1	exon	ENSMUSG00000039512	ProperStrand	79	chr16	23111394	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	6	-7.6145
chr1	74470436	74470453	protein_coding	Vil1	exon	ENSMUSG00000026175	ProperStrand	68	chr11	106362639	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-7.1553
chr17	39985663	39985763	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr10	90644876	90644912	tRNA	tRNA856-AspGTC	.	429439	ProperStrand	65	1	-5.7749
chr9	44192228	44192318	protein_coding	Hyou1	exon	ENSMUSG00000032115	ProperStrand	145	chr10	127521200	127521272	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	1	-7.0359
chr2	26248050	26248106	protein_coding	Pmpca	exon	ENSMUSG00000026926	ProperStrand	45	chr17	13112457	13112547	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-5.1358
chr9	57658229	57658287	protein_coding	Arid3b	utr5	ENSMUSG00000004661	ProperStrand	39	chr11	106362339	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	2	-10.8214
chrX	34667269	34667285	protein_coding	Nkap	exon	ENSMUSG00000016409	NonProperStrand	133	chr9	120038613	120038683	protein_coding	Rpsa	intron	ENSMUSG00000032518	ProperStrand	398	1	-7.9322
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	24343586	24343602	protein_coding	Ntn3	exon	ENSMUSG00000079662	ProperStrand	237	3	-5.5040
chr5	31360522	31361076	protein_coding	Cad	exon	ENSMUSG00000013629	ProperStrand	260	chr2	130101260	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	5	-15.5755
chr3	102974441	102974531	LINE	Lx5	L1	chr3Lx5102974290	ProperStrand	1	chr3	102973901	102973991	LTR	ORR1D2	MaLR	chr3ORR1D2102973707	ProperStrand	1	1	-inf
chr7	112897110	112897126	protein_coding	Tpp1	exon	ENSMUSG00000030894	NonProperStrand	25	chr4	11313566	11313641	protein_coding	Esrp1	utr5	ENSMUSG00000040728	ProperStrand	12	1	-18.4657
chr5	22080574	22080654	lincRNA	6030443J06Rik	intron	ENSMUSG00000087558	ProperStrand	19	chr5	22314109	22314199	protein_coding	Lhfpl3	intron	ENSMUSG00000058361	NonProperStrand	3	1	-inf
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chrX	149828130	149828146	protein_coding	Klf8	utr3	ENSMUSG00000041649	NonProperStrand	107	1	-7.5610
chr5	74489542	74489586	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr14	55057856	55057872	protein_coding	Mmp14	exon	ENSMUSG00000000957	ProperStrand	61	1	-5.5895
chr2	174152114	174152163	protein_coding	Gnas	intron	ENSMUSG00000027523	NonProperStrand	2	chr7	116663634	116663724	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-9.6916
chr7	128101575	128101665	protein_coding	Cdr2	exon	ENSMUSG00000030878	ProperStrand	21	chr9	120038466	120038551	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-8.3293
chr4	53873604	53873646	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	chr1	89681202	89681349	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	4	-6.4875
chr2	143790565	143815592	protein_coding	Rrbp1	exon	ENSMUSG00000027422	ProperStrand	76	chr16	23110827	23110978	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-0.9666
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr4	57706987	57707003	protein_coding	Palm2	intron	ENSMUSG00000090053	NonProperStrand	187	2	-8.2365
chr7	20303033	20303123	protein_coding	Pvrl2	exon	ENSMUSG00000062300	ProperStrand	110	chr18	33954842	33954922	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-2.4306
chr16	5256015	5256031	protein_coding	Fam86	utr5	ENSMUSG00000022544	ProperStrand	231	chr14	33005038	33005092	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-1.6616
chr17	46680281	46680298	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr8	124066021	124066038	protein_coding	Gm20388	intron	ENSMUSG00000092329	NonProperStrand	203	1	-6.8035
chr15	77795377	77795416	protein_coding	Eif3d	exon	ENSMUSG00000016554	ProperStrand	69	chr13	90238641	90238722	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	2	-13.3188
chr10	127483810	127484751	protein_coding	Naca	exon	ENSMUSG00000061315	ProperStrand	50	chr12	17552948	17553007	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	2	-8.9253
chrX	91783040	91783348	protein_coding	Maged1	exon	ENSMUSG00000025151	ProperStrand	43	chr7	117166740	117166820	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-5.4639
chr4	98403571	98403657	protein_coding	L1td1	exon	ENSMUSG00000087166	ProperStrand	43	chr4	131866155	131866245	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-4.2922
chr17	45705376	45705427	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr3	96527940	96527956	protein_coding	Polr3c	exon	ENSMUSG00000028099	NonProperStrand	75	1	-6.2886
chr13	97953682	97955533	protein_coding	Hexb	exon	ENSMUSG00000021665	ProperStrand	22	chr14	76247714	76247794	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	8	-19.6576
chr4	46787089	46787108	protein_coding	Gabbr2	intron	ENSMUSG00000039809	ProperStrand	6	chr4	53873602	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	1	-13.8012
chr7	7250898	7250916	protein_coding	Clcn4-2	intron	ENSMUSG00000000605	NonProperStrand	10	chr4	131908833	131908897	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.3231
chr3	157662672	157664082	protein_coding	Ankrd13c	exon	ENSMUSG00000039988	ProperStrand	14	chr4	131908256	131908346	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-9.8417
chr5	122855915	122855963	protein_coding	Arpc3	utr3	ENSMUSG00000029465	ProperStrand	6	chr7	29136613	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	5	-18.9824
chr4	155323717	155323807	protein_coding	Ube2j2	intron	ENSMUSG00000023286	ProperStrand	35	chr9	15119635	15119715	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.6006
chr19	8963027	8963081	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	chr3	96304918	96304972	tRNA	tRNA746-GlyTCC	.	420644	ProperStrand	12	1	-5.2811
chrX	147081033	147081049	protein_coding	Tro	exon	ENSMUSG00000025272	ProperStrand	13	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-12.0405
chr7	29171541	29171558	protein_coding	Med29	utr3	ENSMUSG00000003444	NonProperStrand	134	chr4	52624888	52624904	protein_coding	4930547C10Rik	exon	ENSMUSG00000028314	ProperStrand	1	1	-inf
chr12	104317206	104317223	protein_coding	Unc79	exon	ENSMUSG00000021198	ProperStrand	99	chr5	121655050	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	5	-12.7043
chr4	106111918	106111943	protein_coding	Usp24	utr3	ENSMUSG00000028514	ProperStrand	74	chr3	153573528	153573583	snoRNA	ENSMUSG00000064731_Snord45b	.	ENSMUSG00000064731	ProperStrand	205	2	-16.4965
chr7	51505233	51505313	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	chr18	35714154	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	5	-1.7888
chr7	86825813	86826704	protein_coding	5730590G19Rik	exon	ENSMUSG00000046591	ProperStrand	45	chr11	69481355	69481435	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.7296
chr18	35342046	35342136	protein_coding	Ctnna1	exon	ENSMUSG00000037815	ProperStrand	115	chr11	69481394	69481474	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-2.0788
chr5	93369587	93369664	protein_coding	Shroom3	exon	ENSMUSG00000029381	ProperStrand	52	chr4	131908236	131908296	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.6297
chr17	47731849	47734409	protein_coding	Ccnd3	exon	ENSMUSG00000034165	ProperStrand	58	chr13	68716555	68718472	protein_coding	Mtrr	exon	ENSMUSG00000034617	ProperStrand	14	1	-16.4110
chr6	38553435	38553525	protein_coding	Luc7l2	utr3	ENSMUSG00000029823	ProperStrand	85	chr2	130102006	130102063	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-4.6828
chr19	3970031	3970047	protein_coding	1700055N04Rik	utr3	ENSMUSG00000037263	ProperStrand	6	chr16	23110865	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-6.6757
chr11	97043022	97043059	protein_coding	Kpnb1	exon	ENSMUSG00000001440	ProperStrand	197	chr17	47840759	47840836	protein_coding	Frs3	utr3	ENSMUSG00000023266	ProperStrand	11	2	-20.4159
chr12	110892839	110892882	snoRNA	ENSMUSG00000064621_AF357355	.	ENSMUSG00000064621	ProperStrand	60	chr8	13876101	13876191	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-7.1438
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr2	32818803	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	2	-6.1395
chr13	9833550	9833655	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr16	90386836	90386853	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	1	-3.9073
chr1	88252710	88252987	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chr8	111238940	111238956	protein_coding	Zfhx3	utr5	ENSMUSG00000038872	ProperStrand	65	1	-7.1978
chr11	118900007	118900025	protein_coding	Cbx8	exon	ENSMUSG00000025578	ProperStrand	95	chr13	103895241	103895257	protein_coding	Mast4	intron	ENSMUSG00000034751	ProperStrand	150	1	-10.5511
chrX	101233564	101233589	LTR	RMER3D-int	ERVK	chrXRMER3D-int101233337	ProperStrand	1	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr4	131908374	131908453	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr6	77195102	77195118	protein_coding	Lrrtm1	exon	ENSMUSG00000060780	ProperStrand	19	1	-9.5791
chr11	106938012	106938992	protein_coding	Bptf	exon	ENSMUSG00000040481	ProperStrand	70	chr1	145626083	145626198	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-8.5202
chr2	32061880	32086188	protein_coding	Prrc2b	exon	ENSMUSG00000039262	ProperStrand	344	chr7	148634715	148634842	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-2.1351
chr15	90799811	90799829	protein_coding	Kif21a	intron	ENSMUSG00000022629	ProperStrand	18	chr9	78327194	78327238	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-8.7540
chr15	99650304	99650365	protein_coding	Lima1	exon	ENSMUSG00000023022	ProperStrand	159	chr7	116663637	116663727	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.0336
chr9	96771785	96771803	protein_coding	Acpl2	intron	ENSMUSG00000043587	NonProperStrand	3	chr3	68889033	68889133	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-9.4435
chr7	117189863	117189943	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr17	13115659	13115783	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	2	-2.1555
chr2	10295875	10295975	protein_coding	Sfmbt2	intron	ENSMUSG00000061186	ProperStrand	17	chr8	32260335	32260408	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	2	-11.5248
chr18	35107635	35107776	protein_coding	Hspa9	exon	ENSMUSG00000024359	ProperStrand	166	chr2	26494764	26494822	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	5	-7.8779
chr17	35654083	35654099	protein_coding	Cchcr1	utr5	ENSMUSG00000040312	NonProperStrand	2	chr6	113126515	113126532	protein_coding	Lhfpl4	exon	ENSMUSG00000042873	NonProperStrand	2	1	-inf
chr3	159089447	159089464	LINE	L1_Mus2	L1	chr3L1_Mus2159087257	NonProperStrand	1	chr5	121655029	121655119	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-inf
chr6	67231712	67231812	protein_coding	Serbp1	exon	ENSMUSG00000036371	ProperStrand	261	chr15	5068442	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-3.2680
chr9	105546700	105546717	protein_coding	Pik3r4	exon	ENSMUSG00000032571	ProperStrand	49	chr4	131866176	131866292	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	4	-13.1570
chr11	29605568	29606465	protein_coding	Rtn4	exon	ENSMUSG00000020458	ProperStrand	117	chr2	32818850	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-4.1866
chr8	3803235	3803325	misc_RNA	RNaseP_nuc	.	ENSMUSG00000088025	ProperStrand	328	chr11	68886951	68887031	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	2	-2.4279
chr16	19883898	19884021	protein_coding	A930003A15Rik	exon	ENSMUSG00000075330	ProperStrand	93	chr9	64022872	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-7.1524
chr8	87219146	87219336	protein_coding	Trmt1	exon	ENSMUSG00000001909	ProperStrand	88	chr14	31827500	31827517	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-6.1872
chr15	40891282	40891299	protein_coding	Zfpm2	intron	ENSMUSG00000022306	NonProperStrand	35	chr16	16323855	16324068	protein_coding	Dnm1l	exon	ENSMUSG00000022789	NonProperStrand	38	1	-15.3243
chr6	122679775	122679847	protein_coding	Slc2a3	utr3	ENSMUSG00000003153	ProperStrand	682	chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	1	-4.6974
chr6	129533251	129534178	protein_coding	Klre1	exon	ENSMUSG00000050241	NonProperStrand	20	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-9.4486
chr4	99577398	99577417	protein_coding	Itgb3bp	intron	ENSMUSG00000028549	ProperStrand	55	chr11	69483135	69483211	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.5991
chr2	119638632	119638663	protein_coding	Tyro3	exon	ENSMUSG00000027298	ProperStrand	35	chr19	8800356	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-4.5474
chr5	24082373	24082423	protein_coding	Abcf2	exon	ENSMUSG00000028953	ProperStrand	50	chr13	49779697	49779746	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	5	-19.5617
chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr13	90238585	90238720	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	1	-2.1221
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr15	98604924	98606960	protein_coding	Wnt10b	exon	ENSMUSG00000022996	NonProperStrand	189	2	-6.2594
chr14	55476645	55476661	protein_coding	Homez	exon	ENSMUSG00000057156	NonProperStrand	127	chr17	24857716	24857737	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.1595
chr4	43505657	43505723	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr9	108382740	108382927	protein_coding	Lamb2	exon	ENSMUSG00000052911	ProperStrand	35	1	-4.0672
chr3	31006519	31006609	protein_coding	Skil	intron	ENSMUSG00000027660	ProperStrand	23	chr11	69483200	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.1990
chr8	109408285	109408375	protein_coding	Chtf8	utr3	ENSMUSG00000046691	ProperStrand	33	chr4	131908355	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.3621
chr11	7160546	7160636	LINE	L1M4c	L1	chr11L1M4c7160521	ProperStrand	1	chr11	7160443	7160533	LINE	L1Md_F2	L1	chr11L1Md_F27159555	ProperStrand	1	1	-inf
chr9	113668786	113668802	protein_coding	Clasp2	intron	ENSMUSG00000033392	NonProperStrand	20	chr5	130300470	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.5361
chr10	117227045	117227061	protein_coding	Nup107	exon	ENSMUSG00000052798	NonProperStrand	66	chr4	122968659	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-6.0928
chr6	119304181	119304262	protein_coding	Adipor2	utr3	ENSMUSG00000030168	ProperStrand	79	chr10	23505151	23505202	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-0.8821
chr8	72347614	72347704	protein_coding	Lpar2	exon	ENSMUSG00000031861	ProperStrand	44	chr7	117189944	117190038	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	21	-inf
chr11	26101047	26101137	protein_coding	5730522E02Rik	intron	ENSMUSG00000032985	ProperStrand	9	chr18	22611223	22611303	protein_coding	Asxl3	intron	ENSMUSG00000045215	ProperStrand	9	1	-19.9880
chr14	80138269	80138285	miRNA	Mir759	.	ENSMUSG00000076453	ProperStrand	1	chr8	129468746	129468846	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-inf
chr1	23267905	23268005	DNA	MER2	MER2_type	chr1MER223267881	NonProperStrand	1	chr7	52381973	52382016	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-inf
chr4	131908685	131908716	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr1	88252842	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-1.2161
chr11	32113274	32113291	protein_coding	Rhbdf1	exon	ENSMUSG00000020282	ProperStrand	23	chr19	10274916	10274998	protein_coding	Fen1	exon	ENSMUSG00000024742	ProperStrand	44	1	-15.8922
chr7	67128131	67128297	protein_coding	Snrpn	exon	ENSMUSG00000000948	ProperStrand	32	chr9	120038609	120038674	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-7.0608
chr11	24374945	24374965	lincRNA	Gm12068	intron	ENSMUSG00000087085	NonProperStrand	5	chr13	20564016	20564034	protein_coding	Elmo1	intron	ENSMUSG00000041112	NonProperStrand	34	2	-19.7384
chr2	90235294	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	39358287	39358304	protein_coding	Olfr958	exon	ENSMUSG00000050853	NonProperStrand	266	2	-3.3307
chr14	27466190	27466418	protein_coding	Arf4	exon	ENSMUSG00000021877	ProperStrand	14	chr11	116714148	116714217	protein_coding	Srsf2	exon	ENSMUSG00000034120	ProperStrand	132	1	-14.6938
chrX	34667269	34667285	protein_coding	Nkap	exon	ENSMUSG00000016409	NonProperStrand	133	chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	1	-9.8372
chr11	60370443	60370462	protein_coding	Alkbh5	utr3	ENSMUSG00000042650	ProperStrand	203	chr9	40612830	40612920	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	1	-7.1133
chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	6	-5.2562
chr12	76696634	76696734	protein_coding	Ppp2r5e	utr5	ENSMUSG00000021051	ProperStrand	9	chr7	29136621	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.9747
chr16	3948964	3948980	protein_coding	Nlrc3	exon	ENSMUSG00000049871	ProperStrand	5	chr15	79913292	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-8.6129
chr2	90235299	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	41140757	41140773	protein_coding	Akd1	intron	ENSMUSG00000091415	ProperStrand	15	1	-7.2074
chr14	55057856	55057872	protein_coding	Mmp14	exon	ENSMUSG00000000957	ProperStrand	61	chr9	64023228	64023264	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	1	-8.4121
chr9	107517344	107518591	protein_coding	Gnai2	exon	ENSMUSG00000032562	ProperStrand	29	chr4	131908236	131908319	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-4.5691
chr4	136884951	136885005	protein_coding	Cdc42	exon	ENSMUSG00000006699	ProperStrand	38	chr2	69349087	69349107	protein_coding	Lrp2	exon	ENSMUSG00000027070	ProperStrand	35	1	-15.3359
chr2	90235294	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	143006662	143006678	protein_coding	Pramef8	exon	ENSMUSG00000046862	ProperStrand	7	2	-14.2153
chr2	178194847	178194864	protein_coding	Cdh26	exon	ENSMUSG00000039155	NonProperStrand	77	chrX	71517834	71517905	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-6.0532
chr17	24665444	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	chr7	67125799	67125829	snoRNA	ENSMUSG00000089375_Snord107	.	ENSMUSG00000089375	ProperStrand	451	1	-1.4125
chr15	58769001	58770860	protein_coding	Ndufb9	exon	ENSMUSG00000022354	ProperStrand	13	chr19	25484358	25484374	protein_coding	Kank1	exon	ENSMUSG00000032702	ProperStrand	218	1	-13.8430
chr19	46022236	46022252	protein_coding	9130011E15Rik	intron	ENSMUSG00000039901	ProperStrand	129	chr15	79908932	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-4.0048
chr6	118038150	118038240	protein_coding	Rasgef1a	exon	ENSMUSG00000030134	ProperStrand	6	chr4	131865899	131865979	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-6.1051
chr2	90235298	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr13	52742450	52742466	protein_coding	Syk	utr3	ENSMUSG00000021457	NonProperStrand	125	1	-3.1001
chr11	58809803	58810353	protein_coding	Obscn	exon	ENSMUSG00000061462	ProperStrand	81	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.3246
chr14	26478171	26478188	protein_coding	Zmiz1	intron	ENSMUSG00000007817	ProperStrand	34	chr15	34370545	34370618	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-4.6234
chr9	61761720	61761744	protein_coding	Rplp1	exon	ENSMUSG00000007892	ProperStrand	116	chr10	110918549	110918639	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	7	-16.2816
chr7	13615297	13615474	protein_coding	Trim28	exon	ENSMUSG00000005566	ProperStrand	296	chr9	15118273	15118353	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-0.9323
chr7	118787772	118787792	protein_coding	Galntl4	intron	ENSMUSG00000038296	ProperStrand	12	chr13	44965293	44965383	protein_coding	Jarid2	intron	ENSMUSG00000038518	ProperStrand	372	1	-12.9403
chr5	115940326	115940380	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	chr10	39978402	39978485	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-1.4102
chr12	17552949	17553032	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr2	26768094	26768119	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	1	-0.9305
chr6	115389952	115389970	protein_coding	Pparg	exon	ENSMUSG00000000440	NonProperStrand	3	chr8	12757418	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-14.9660
chr8	80171627	80171645	lincRNA	4933431K23Rik	intron	ENSMUSG00000086451	NonProperStrand	8	chr14	67606243	67606296	protein_coding	Bnip3l	utr3	ENSMUSG00000022051	ProperStrand	30	1	-18.5653
chr15	8086667	8087854	protein_coding	Nup155	exon	ENSMUSG00000022142	ProperStrand	91	chr6	91707684	91707734	protein_coding	Slc6a6	utr3	ENSMUSG00000030096	ProperStrand	206	1	-10.0027
chr19	45082650	45082750	protein_coding	Peo1	exon	ENSMUSG00000025209	ProperStrand	8	chr5	147646788	147646850	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	1	-12.0886
chr9	47605547	47605612	protein_coding	Cadm1	utr5	ENSMUSG00000032076	ProperStrand	77	chr11	68887040	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-3.6767
chr7	19737866	19737914	protein_coding	Snrpd2	exon	ENSMUSG00000040824	ProperStrand	23	chr16	23110528	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.2122
chr1	182834894	182836053	protein_coding	Pycr2	exon	ENSMUSG00000026520	ProperStrand	89	chr1	162965535	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.5776
chr5	8770988	8771009	LTR	RLTR17	ERVK	chr5RLTR178770737	NonProperStrand	2	chr10	80645177	80645203	protein_coding	Eef2	utr3	ENSMUSG00000034994	ProperStrand	2244	2	-inf
chr13	76278084	76278108	protein_coding	Ttc37	exon	ENSMUSG00000033991	ProperStrand	28	chr4	131908688	131908750	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.4067
chr16	21761581	21761597	protein_coding	Ehhadh	utr3	ENSMUSG00000022853	ProperStrand	3	chr2	158205305	158205405	snoRNA	ENSMUSG00000064585_SNORA71	.	ENSMUSG00000064585	ProperStrand	418	1	-15.8354
chr9	65542033	65658092	protein_coding	Zfp609	intron	ENSMUSG00000040524	ProperStrand	87	chr11	69483136	69483216	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-5.1587
chr17	32335684	32358388	protein_coding	Brd4	exon	ENSMUSG00000024002	ProperStrand	121	chr16	23111690	23111770	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-2.9945
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr1	162968442	162968467	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-0.7252
chr4	141029815	141029852	protein_coding	Spen	exon	ENSMUSG00000040761	ProperStrand	161	chr7	117166825	117166861	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-2.9786
chr5	115994414	115994504	protein_coding	Pxn	exon	ENSMUSG00000029528	ProperStrand	171	chr11	68886931	68887011	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	2	-4.0311
chr5	73368804	73368894	protein_coding	Slain2	utr3	ENSMUSG00000036087	ProperStrand	15	chr2	26493399	26493479	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-6.4501
chr10	60197464	60197480	protein_coding	Slc29a3	intron	ENSMUSG00000020100	ProperStrand	23	chr7	116663689	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.2677
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr18	61173730	61173749	protein_coding	Slc6a7	utr5	ENSMUSG00000052026	ProperStrand	2	1	-17.9745
chr8	125010500	125010699	protein_coding	Fam38a	exon	ENSMUSG00000014444	ProperStrand	132	chr18	67943589	67943666	protein_coding	Seh1l	exon	ENSMUSG00000079614	ProperStrand	19	3	-19.2529
chr3	135233384	135233484	protein_coding	Manba	utr3	ENSMUSG00000028164	ProperStrand	18	chr11	77996560	77996619	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-8.5081
chr18	70668961	70668982	protein_coding	Poli	exon	ENSMUSG00000038425	ProperStrand	7	chr17	39985193	39985295	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-10.3222
chr5	100855902	100855965	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr11	48615818	48615836	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	2	-5.6014
chr10	79633583	79633673	protein_coding-noncoding	Cirbp	utr5	ENSMUSG00000045193	ProperStrand	6	chr10	79633818	79633908	protein_coding	Cirbp	utr3	ENSMUSG00000045193	ProperStrand	3	1	-inf
chr8	90642664	90642689	protein_coding	Tmem188	utr5	ENSMUSG00000036810	ProperStrand	14	chr12	60141444	60141509	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-9.7729
chr18	42369711	42369801	protein_coding	Lars	exon	ENSMUSG00000024493	ProperStrand	69	chr18	33954813	33954893	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-3.2501
chr5	135421573	135421673	protein_coding	Cldn4	utr3	ENSMUSG00000047501	ProperStrand	12	chr16	23110964	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.4686
chr14	27466470	27472598	protein_coding	Arf4	exon	ENSMUSG00000021877	ProperStrand	14	chr13	96374713	96374729	protein_coding	F2r	exon	ENSMUSG00000048376	NonProperStrand	88	1	-15.5139
chr4	32757551	32757589	protein_coding	Mdn1	exon	ENSMUSG00000058006	ProperStrand	184	chr5	74489563	74489653	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	6	-11.6144
chr5	54389951	54389967	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	chr6	143813837	143813853	protein_coding	Sox5	intron	ENSMUSG00000041540	NonProperStrand	49	1	-11.1900
chr2	31131687	31131787	protein_coding	Ncs1	intron	ENSMUSG00000062661	ProperStrand	6	chr1	162967137	162967178	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	4	-19.6406
chr10	127829583	127829632	protein_coding	Ankrd52	utr3	ENSMUSG00000014498	ProperStrand	26	chr10	57786382	57786401	protein_coding	Lims1	utr5	ENSMUSG00000019920	NonProperStrand	3	1	-inf
chr1	173433177	173433269	protein_coding	B930036N10Rik	utr3	ENSMUSG00000091993	ProperStrand	150	chr2	26494708	26494762	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.5838
chr1	107597549	107597639	protein_coding	2310035C23Rik	intron	ENSMUSG00000026319	ProperStrand	14	chr10	23505167	23505247	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.6795
chr13	97266647	97266664	protein_coding	Polk	exon	ENSMUSG00000021668	NonProperStrand	25	chr2	29917672	29917730	protein_coding	Set	utr5	ENSMUSG00000054766	ProperStrand	167	1	-13.0307
chr3	9447538	9452319	protein_coding	Zfp704	exon	ENSMUSG00000040209	ProperStrand	67	chr9	103401280	103401296	protein_coding	Tmem108	exon	ENSMUSG00000042757	NonProperStrand	323	1	-9.7187
chr10	80967984	80968084	protein_coding	Gna15	intron	ENSMUSG00000034792	ProperStrand	5	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-7.2327
chr12	110796515	110809685	lincRNA	Meg3	exon	ENSMUSG00000021268	ProperStrand	61	chr12	86474487	86474526	protein_coding	Dlst	utr3	ENSMUSG00000004789	ProperStrand	52	4	-18.7089
chr2	129657069	129657159	protein_coding	Stk35	utr3	ENSMUSG00000037885	ProperStrand	28	chr2	26493405	26493485	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-5.2032
chr7	31895791	31899711	protein_coding	Hpn	utr5	ENSMUSG00000001249	ProperStrand	126	chr5	45835896	45835913	protein_coding	Qdpr	exon	ENSMUSG00000015806	ProperStrand	3	1	-18.3277
chr2	160623704	160623794	protein_coding	Zhx3	intron	ENSMUSG00000035877	ProperStrand	16	chr9	100683360	100683450	protein_coding	Stag1	intron	ENSMUSG00000037286	NonProperStrand	7	1	-inf
chr2	3421908	3421924	protein_coding	Hspa14	utr3	ENSMUSG00000079615	ProperStrand	14	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-13.0482
chr1	174102979	174120603	protein_coding	Dcaf8	intron	ENSMUSG00000026554	ProperStrand	35	chr16	23111389	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-3.7592
chr13	97251936	97251952	protein_coding	Polk	utr3	ENSMUSG00000021668	NonProperStrand	25	chr7	19590197	19590213	protein_coding	Irf2bp1	exon	ENSMUSG00000044030	NonProperStrand	81	1	-14.4848
chr2	174109652	174109742	antisense	Nespas	.	ENSMUSG00000086537	ProperStrand	8	chr10	110918549	110918629	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-7.4365
chr8	86462872	86462900	protein_coding	Lphn1	exon	ENSMUSG00000013033	ProperStrand	221	chr13	46765144	46765160	protein_coding	C78339	exon	ENSMUSG00000069237	NonProperStrand	104	1	-9.5949
chr9	24549597	24549618	protein_coding	Tbx20	intron	ENSMUSG00000031965	NonProperStrand	110	chr18	35714191	35714290	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	4	-8.6421
chr2	26278481	26278497	protein_coding	Sec16a	intron	ENSMUSG00000026924	NonProperStrand	5	chrX	71655996	71656118	protein_coding	G6pdx	exon	ENSMUSG00000031400	ProperStrand	16	1	-19.8777
chr17	56919395	56919449	protein_coding	Rfx2	exon	ENSMUSG00000024206	ProperStrand	32	chr12	33723779	33727224	protein_coding	Cdhr3	exon	ENSMUSG00000035860	NonProperStrand	4	1	-19.3591
chr17	36166944	36167033	antisense	A930015D03Rik	.	ENSMUSG00000092368	ProperStrand	2	chr1	91651057	91651137	protein_coding	Agap1	intron	ENSMUSG00000055013	NonProperStrand	32	1	-inf
chr16	91659505	91659551	protein_coding	Son	exon	ENSMUSG00000022961	ProperStrand	59	chr1	162965531	162965586	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-5.6638
chr11	62690624	62690641	protein_coding	Trim16	utr3	ENSMUSG00000047821	NonProperStrand	5	chr11	106362638	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-12.5579
chr3	90069342	90069438	protein_coding	Dennd4b	utr5	ENSMUSG00000042404	ProperStrand	13	chr10	86221857	86221873	protein_coding	BC030307	exon	ENSMUSG00000044937	ProperStrand	77	1	-15.9378
chr13	23831104	23831134	protein_coding	Hist1h1c	exon	ENSMUSG00000036181	ProperStrand	99	chr7	148634769	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-3.0659
chr11	106643400	106649618	protein_coding	Ddx5	exon	ENSMUSG00000020719	ProperStrand	181	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	7	-0.7618
chr3	96218359	96218449	misc_RNA	Telomerase-vert	.	ENSMUSG00000064796	ProperStrand	443	chr19	8800379	8800460	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-1.1612
chrX	75219356	75219373	LTR	MMERGLN-int	ERV1	chrXMMERGLN-int75218693	NonProperStrand	7	chr9	120039313	120039330	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	1	-13.9533
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr9	119394518	119394535	protein_coding	Scn5a	utr3	ENSMUSG00000032511	ProperStrand	19	1	-10.9212
chr3	144741286	144741303	protein_coding	Clca5	intron	ENSMUSG00000036960	NonProperStrand	8	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-7.2483
chr13	73463407	73463423	protein_coding	Ndufs6	intron	ENSMUSG00000021606	NonProperStrand	52	chr7	134088505	134088535	protein_coding	Kctd13	exon	ENSMUSG00000030685	ProperStrand	6	1	-18.0147
chr14	55684964	55685016	protein_coding	Zfhx2	exon	ENSMUSG00000040721	ProperStrand	18	chr7	52382237	52382290	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-10.7210
chr12	32025740	32025785	protein_coding	Dld	exon	ENSMUSG00000020664	ProperStrand	4	chr4	131865860	131865930	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.0048
chr18	41356147	41356184	miRNA	Mir5097	dead	ENSMUSG00000093361	ProperStrand	221	chr16	23111729	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-2.2118
chr17	35281258	35281305	protein_coding	Bag6	exon	ENSMUSG00000024392	ProperStrand	181	chr1	192712615	192712631	protein_coding	Rps6kc1	exon	ENSMUSG00000089872	ProperStrand	241	1	-8.3158
chr1	180181220	180181236	protein_coding	Pppde1	utr3	ENSMUSG00000026502	ProperStrand	27	chr2	158182201	158182280	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-6.5761
chr10	127452345	127453020	protein_coding	Prim1	exon	ENSMUSG00000025395	ProperStrand	12	chr10	23505176	23505266	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	7	-inf
chr10	119542407	119542507	protein_coding	Helb	exon	ENSMUSG00000020228	ProperStrand	41	chr11	6520321	6520395	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	1	-8.4804
chr10	77464061	77464151	protein_coding	Pfkl	exon	ENSMUSG00000020277	ProperStrand	179	chr18	33954850	33954930	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-1.6486
chr4	137813143	137813161	protein_coding	Sh2d5	exon	ENSMUSG00000045349	NonProperStrand	31	chr7	116663634	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-6.2913
chr2	142894041	142895113	protein_coding	Snrpb2	exon	ENSMUSG00000008333	ProperStrand	11	chr19	8798744	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-8.1994
chr15	99616466	99616529	protein_coding	Lima1	intron	ENSMUSG00000023022	ProperStrand	159	chr3	22089958	22090326	protein_coding	Tbl1xr1	exon	ENSMUSG00000027630	ProperStrand	44	2	-18.8205
chr9	35271682	35271762	protein_coding	Cdon	exon	ENSMUSG00000038119	ProperStrand	33	chr2	144091714	144091804	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	ProperStrand	549	1	-10.0872
chr6	13820663	13820680	protein_coding	2610001J05Rik	exon	ENSMUSG00000052419	NonProperStrand	13	chr4	131908419	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.0703
chr18	10052133	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr15	78003172	78003189	protein_coding	Ift27	intron	ENSMUSG00000016637	NonProperStrand	3	1	-15.1637
chr5	66651465	66651481	protein_coding	Nsun7	utr5	ENSMUSG00000029206	NonProperStrand	73	chr11	77996560	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-5.7067
chr11	115279165	115279235	protein_coding	Atp5h	exon	ENSMUSG00000034566	ProperStrand	11	chr16	23110527	23110579	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-13.5122
chr19	56796961	56796978	protein_coding	Adrb1	exon	ENSMUSG00000035283	NonProperStrand	8	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-11.8681
chr5	150921468	150921492	protein_coding	Fry	intron	ENSMUSG00000056602	NonProperStrand	11	chr16	23111448	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-7.1274
chr4	141000906	141000925	protein_coding	Zbtb17	intron	ENSMUSG00000006215	ProperStrand	11	chr5	140047464	140047481	protein_coding	Uncx	intron	ENSMUSG00000029546	NonProperStrand	1	1	-inf
chr19	8799828	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	chr16	18240819	18240919	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	1	-1.3119
chr4	117780297	117807024	protein_coding	St3gal3	utr5	ENSMUSG00000028538	NonProperStrand	6	chr4	116827119	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-11.7847
chr1	72760188	72760225	protein_coding	Rpl37a	utr3	ENSMUSG00000046330	ProperStrand	94	chr15	71624752	71624797	snoRNA	ENSMUSG00000088895_SNORA81	.	ENSMUSG00000088895	ProperStrand	348	1	-8.8915
chr13	107737212	107737228	protein_coding	Dimt1	utr5	ENSMUSG00000021692	ProperStrand	185	chr1	162966813	162966836	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-4.0829
chr12	114290175	114290191	protein_coding	Pacs2	intron	ENSMUSG00000021143	NonProperStrand	302	chr9	86449905	86451142	protein_coding	Pgm3	exon	ENSMUSG00000056131	ProperStrand	6	1	-14.8348
chr11	121116439	121116457	protein_coding	Narf	utr3	ENSMUSG00000000056	ProperStrand	4	chr11	97642952	97643094	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-7.8635
chr9	15119274	15119300	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	chr5	73563222	73563238	protein_coding	Fryl	intron	ENSMUSG00000070733	ProperStrand	173	1	-7.5923
chr5	23825941	23825957	protein_coding	Kcnh2	exon	ENSMUSG00000038319	ProperStrand	242	chr4	151357343	151357391	protein_coding	Thap3	exon	ENSMUSG00000039759	ProperStrand	2	1	-18.2811
chr9	27130917	27131788	protein_coding	Igsf9b	exon	ENSMUSG00000034275	ProperStrand	18	chr16	23110955	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7867
chr7	27974510	27974529	protein_coding	Snrpa	exon	ENSMUSG00000061479	ProperStrand	56	chr4	131865855	131865979	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.8759
chr7	20365006	20365081	protein_coding	Cblc	utr3	ENSMUSG00000040525	ProperStrand	3	chr3	123210854	123210912	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-8.0648
chr4	137867884	137867961	protein_coding	Ddost	utr3	ENSMUSG00000028757	ProperStrand	49	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-4.6043
chr11	69483136	69483237	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	NonProperStrand	35	chr3	123210929	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	NonProperStrand	45	1	-14.9820
chrX	45610105	45610123	protein_coding	Utp14a	utr5	ENSMUSG00000063785	ProperStrand	22	chr11	106362556	106362635	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-9.4258
chr9	62643915	62644618	protein_coding	Fem1b	exon	ENSMUSG00000032244	ProperStrand	111	chr4	131865856	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.8331
chr11	100567675	100567716	protein_coding	Kat2a	exon	ENSMUSG00000020918	ProperStrand	68	chr19	30249536	30249636	protein_coding	Gldc	exon	ENSMUSG00000024827	ProperStrand	175	19	-18.6826
chr7	112533563	112533579	protein_coding	Fam160a2	exon	ENSMUSG00000044465	ProperStrand	85	chr2	158182201	158182280	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	3	-10.4174
chr7	135023543	135023607	protein_coding	Zfp646	exon	ENSMUSG00000049739	ProperStrand	29	chr4	131908688	131908722	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.3468
chr9	63868722	63868739	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	chr7	51505506	51505590	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	1	-4.1529
chr18	35714201	35714245	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	chr7	88674753	88674817	snoRNA	ENSMUSG00000093107_AC167122.1	.	ENSMUSG00000093107	ProperStrand	110	1	-2.3729
chr11	66839432	66843475	protein_coding	Tmem220	exon	ENSMUSG00000050270	ProperStrand	4	chr17	24857754	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-12.7746
chr17	34168788	34168862	protein_coding	Rxrb	utr5	ENSMUSG00000039656	ProperStrand	34	chr13	23528215	23528284	tRNA	tRNA103-LysCTT	.	390414	ProperStrand	180	1	-12.2559
chr8	71418533	71418607	protein_coding	Lpl	exon	ENSMUSG00000015568	ProperStrand	11	chr17	35089182	35089239	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-8.9052
chr19	4447141	4447187	lincRNA	A930001C03Rik	exon	ENSMUSG00000087132	ProperStrand	6	chr5	37492014	37493012	protein_coding	Jakmip1	exon	ENSMUSG00000063646	ProperStrand	21	1	-18.5896
chr6	95079427	95079443	protein_coding	Kbtbd8	utr3	ENSMUSG00000030031	ProperStrand	26	chr7	51506340	51506398	protein_coding	2410002F23Rik	exon	ENSMUSG00000045411	ProperStrand	628	1	-10.3027
chr18	10052131	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr7	75371185	75371201	protein_coding	Igf1r	exon	ENSMUSG00000005533	NonProperStrand	9	1	-12.6845
chr5	140235809	140236039	protein_coding	Ints1	exon	ENSMUSG00000029547	ProperStrand	45	chr9	120038613	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.5633
chr10	7534485	7534583	protein_coding	Ppil4	exon	ENSMUSG00000015757	ProperStrand	18	chr18	73693169	73693186	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	5	-21.6956
chr5	24805499	24805589	protein_coding	Mll3	exon	ENSMUSG00000038056	ProperStrand	31	chr11	116938594	116938684	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	2	-12.0057
chr12	50485931	50485947	protein_coding	Foxg1	exon	ENSMUSG00000020950	NonProperStrand	26	chr12	17552949	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-6.7405
chr3	97561502	97561519	protein_coding	Pde4dip	exon	ENSMUSG00000038170	NonProperStrand	15	chr1	72871165	72871262	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	1	-12.3022
chr12	101437895	101441785	protein_coding	Calm1	utr5	ENSMUSG00000001175	ProperStrand	23	chr7	86601691	86603136	protein_coding	Polg	exon	ENSMUSG00000039176	ProperStrand	93	1	-14.3715
chr17	35387059	35387159	protein_coding	Ddx39b	intron	ENSMUSG00000019432	ProperStrand	119	chr11	101466308	101466340	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	2	-12.0160
chr1	83022909	83022952	protein_coding	Slc19a3	exon	ENSMUSG00000038496	ProperStrand	1	chr11	101466255	101466350	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	1	-inf
chr14	67604141	67604185	protein_coding	Bnip3l	utr3	ENSMUSG00000022051	ProperStrand	30	chr7	117166818	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	2	-10.0497
chr16	23111515	23111583	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr7	116663634	116663724	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	4	-0.9697
chr11	102169322	102169378	protein_coding	Ubtf	exon	ENSMUSG00000020923	ProperStrand	66	chr6	113338810	113338898	protein_coding	Arpc4	utr3	ENSMUSG00000079426	ProperStrand	10	1	-16.7516
chr11	33056723	33061162	protein_coding	Npm1	exon	ENSMUSG00000057113	ProperStrand	352	chr17	24857721	24857815	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	5	-2.3218
chr6	54379743	54379760	lincRNA	9130019P16Rik	exon	ENSMUSG00000073067	ProperStrand	255	chr9	64025587	64025729	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	1	-5.8130
chr17	31758476	31759429	protein_coding	Cbs	exon	ENSMUSG00000024039	ProperStrand	12	chr19	8963096	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.2811
chr3	156225069	156225085	protein_coding	Negr1	utr5	ENSMUSG00000040037	NonProperStrand	25	chr10	23505150	23505234	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-4.6249
chr16	13538796	13538852	protein_coding	Parn	utr3	ENSMUSG00000022685	ProperStrand	30	chr4	131908689	131908720	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.2894
chr16	21221833	21221938	protein_coding	Ephb3	exon	ENSMUSG00000005958	NonProperStrand	14	chr18	35714187	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	4	-21.7859
chr5	143666045	143666112	protein_coding	Actb	exon	ENSMUSG00000029580	ProperStrand	446	chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	1	-4.8128
chr3	95433099	95433173	protein_coding	Ensa	utr3	ENSMUSG00000038619	ProperStrand	4	chr17	69768111	69768127	protein_coding	C030034I22Rik	utr3	ENSMUSG00000073374	ProperStrand	2	2	-inf
chr6	115757992	115758120	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr11	51551280	51551309	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	1	-0.7557
chr4	119770713	119770729	protein_coding	Hivep3	exon	ENSMUSG00000028634	NonProperStrand	13	chr2	32818806	32818939	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	4	-inf
chr13	112540780	112541440	protein_coding	Map3k1	exon	ENSMUSG00000021754	ProperStrand	113	chr3	68889229	68889268	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-2.1582
chrX	148707800	148707890	protein_coding	Kdm5c	utr3	ENSMUSG00000025332	ProperStrand	139	chr7	148634713	148634793	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-2.4735
chr7	4745709	4745735	protein_coding	Rpl28	exon	ENSMUSG00000030432	ProperStrand	220	chr11	77995191	77995236	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	2	-6.2320
chr17	35822057	35822257	protein_coding	Ddr1	exon	ENSMUSG00000003534	ProperStrand	129	chr8	72334599	72334615	protein_coding	Gmip	exon	ENSMUSG00000036246	ProperStrand	102	1	-10.7103
chr1	162967735	162967780	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	chr11	116938557	116938644	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	3	-8.1377
chr7	118219573	118219638	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	chr10	30530970	30531027	tRNA	tRNA81-GluCTC	.	691451	ProperStrand	154	1	-2.4662
chr5	136344186	136344202	protein_coding	Srrm3	utr3	ENSMUSG00000039860	ProperStrand	41	chr1	162965981	162966041	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-4.3197
chr7	149762328	149762380	lincRNA	H19	exon	ENSMUSG00000000031	ProperStrand	20	chr11	97642952	97643014	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.4938
chr19	9052588	9052620	protein_coding	Eef1g	utr3	ENSMUSG00000071644	ProperStrand	410	chr3	4339069	4339118	rRNA	n-R5s194	.	ENSMUSG00000077912	ProperStrand	24	1	-11.3178
chr19	9210158	9210212	lincRNA	Gm9750	intron	ENSMUSG00000024658	ProperStrand	2	chr1	162967513	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-10.7784
chr17	35087894	35087912	processed_transcript	1110038B12Rik	.	ENSMUSG00000092203	ProperStrand	126	chr17	35087913	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-3.7868
chr13	45002914	45005737	protein_coding	Jarid2	exon	ENSMUSG00000038518	ProperStrand	372	chr2	32818906	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-2.1286
chr1	162968212	162968289	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	chrX	71517859	71517949	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-0.8724
chr9	59197670	59197687	protein_coding	Bbs4	intron	ENSMUSG00000025235	ProperStrand	6	chr5	121655100	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-8.3778
chr13	55739426	55739554	protein_coding	Ddx46	exon	ENSMUSG00000021500	ProperStrand	87	chr19	10946206	10946222	protein_coding	Tmem109	utr3	ENSMUSG00000034659	ProperStrand	2	1	-20.1717
chr9	110141719	110141737	protein_coding	Smarcc1	utr3	ENSMUSG00000032481	ProperStrand	108	chr18	35714207	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-2.4038
chr7	144645336	144645406	protein_coding	Glrx3	intron	ENSMUSG00000031068	ProperStrand	35	chr9	15118323	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	3	-10.7877
chr9	107487808	107487908	protein_coding	Hyal3	exon	ENSMUSG00000036091	ProperStrand	3	chr18	35716825	35716884	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-8.1910
chr16	11144201	11144301	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr1	145986326	145986344	protein_coding	Rgs13	utr3	ENSMUSG00000051079	ProperStrand	2	1	-18.2639
chr17	46884450	46884466	protein_coding	Cnpy3	exon	ENSMUSG00000023973	ProperStrand	85	chr5	148452315	148452334	protein_coding	Flt1	intron	ENSMUSG00000029648	ProperStrand	10	1	-16.2428
chr14	59974774	59974809	protein_coding-noncoding	D14Ertd668e	utr3	ENSMUSG00000068245	ProperStrand	1	chr16	23110909	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr2	93348503	93348593	LINE	L1Md_T	L1	chr2L1Md_T93348212	NonProperStrand	1	chr17	35521417	35521497	protein_coding	H2-Q4	utr3	ENSMUSG00000035929	NonProperStrand	10	1	-inf
chr11	6519853	6519943	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	chr4	122970440	122970523	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-2.3407
chr11	97694921	97695402	protein_coding	Lasp1	exon	ENSMUSG00000038366	ProperStrand	65	chr11	77996560	77996583	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-5.9344
chr4	137799999	137800015	protein_coding	Hp1bp3	utr3	ENSMUSG00000028759	NonProperStrand	3	chr17	39985372	39985431	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-12.2652
chr2	9985901	9985917	protein_coding	Atp5c1	exon	ENSMUSG00000025781	ProperStrand	138	chr6	137697266	137697285	protein_coding	Strap	exon	ENSMUSG00000030224	ProperStrand	27	1	-13.2584
chr12	100018276	100018328	protein_coding	Zc3h14	exon	ENSMUSG00000021012	ProperStrand	27	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-10.5912
chr1	173433177	173433267	protein_coding	B930036N10Rik	utr3	ENSMUSG00000091993	ProperStrand	150	chr7	117166726	117166806	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-3.1047
chr2	90235307	90235346	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	80415108	80415125	protein_coding	Myo1d	exon	ENSMUSG00000035441	ProperStrand	144	2	-4.9423
chr14	30781653	30781716	protein_coding	Selk	utr5	ENSMUSG00000042682	ProperStrand	16	chr1	162967514	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	5	-19.5226
chr9	64981511	64981529	protein_coding	Igdcc4	exon	ENSMUSG00000032816	NonProperStrand	36	chr16	23111383	23111445	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.0295
chr6	7816876	7816902	protein_coding	C1galt1	exon	ENSMUSG00000042460	ProperStrand	8	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-11.8335
chr6	11957006	11957096	protein_coding	Phf14	exon	ENSMUSG00000029629	ProperStrand	26	chr19	8963048	8963128	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.7706
chr15	79365468	79365504	protein_coding	Ddx17	intron	ENSMUSG00000055065	ProperStrand	140	chr3	68889147	68889239	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-1.8156
chr17	27904870	27904908	protein_coding	D17Wsu92e	exon	ENSMUSG00000056692	ProperStrand	61	chr10	127521200	127521270	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	2	-13.9177
chr10	83990920	83990937	protein_coding	Ckap4	exon	ENSMUSG00000046841	ProperStrand	60	chr11	120208489	120208545	protein_coding	Actg1	exon	ENSMUSG00000062825	ProperStrand	178	1	-11.1312
chr7	35013991	35014382	protein_coding	Gpi1	exon	ENSMUSG00000036427	ProperStrand	288	chr18	40416855	40416871	protein_coding	2900055J20Rik	exon	ENSMUSG00000071860	ProperStrand	5	1	-15.3356
chr1	60154522	60154568	protein_coding	Wdr12	utr5	ENSMUSG00000026019	ProperStrand	36	chr13	81648026	81648043	protein_coding	Gpr98	intron	ENSMUSG00000069170	NonProperStrand	22	1	-16.3751
chr9	17606912	17606929	LINE	Lx5	L1	chr9Lx517605664	ProperStrand	6	chr3	97817679	97851652	protein_coding	Notch2	exon	ENSMUSG00000027878	ProperStrand	86	1	-17.2253
chr4	41673405	41673421	protein_coding	Il11ra1	intron	ENSMUSG00000073889	ProperStrand	128	chr7	116663699	116663759	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.3221
chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	chr7	149170854	149171340	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	1	-6.1378
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr2	26494708	26494825	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	4	-1.4090
chr7	20282065	20282157	protein_coding	Apoe	exon	ENSMUSG00000002985	ProperStrand	231	chr9	120038553	120038633	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-1.8817
chr16	85280907	85280924	LINE	L1M5	L1	chr16L1M585280779	NonProperStrand	30	chr9	64062394	64101038	protein_coding	Map2k1	exon	ENSMUSG00000004936	ProperStrand	36	1	-15.7621
chr11	4983499	4983533	protein_coding	Ewsr1	exon	ENSMUSG00000009079	ProperStrand	248	chr11	69400465	69400925	protein_coding	Trp53	exon	ENSMUSG00000059552	ProperStrand	47	3	-inf
chr7	99322128	99322147	protein_coding	Dlg2	intron	ENSMUSG00000052572	ProperStrand	33	chr7	118219594	118219644	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-5.3243
chr2	26493388	26493474	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr2	18508668	18508705	tRNA	tRNA1947-AsnGTT	.	1181182	ProperStrand	179	1	-1.8462
chr19	45308496	45308513	protein_coding	Lbx1	exon	ENSMUSG00000025216	ProperStrand	23	chr11	60370927	60370943	protein_coding	Alkbh5	utr3	ENSMUSG00000042650	ProperStrand	203	1	-12.8104
chr2	158184098	158184196	snoRNA	ENSMUSG00000064995_SNORA71	.	ENSMUSG00000064995	ProperStrand	430	chr5	130300534	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	7	-3.8141
chr6	83087231	83100981	protein_coding	Rtkn	utr5	ENSMUSG00000034930	ProperStrand	4	chr18	35714148	35714246	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-14.7374
chr4	38558289	38558307	lincRNA	Gm12381	intron	ENSMUSG00000085632	NonProperStrand	1	chr1	9932549	9932626	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-inf
chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	chr3	72692659	72692678	protein_coding	Sis	utr3	ENSMUSG00000027790	ProperStrand	2	1	-17.0718
chr7	116664142	116665163	protein_coding	Rpl27a	exon	ENSMUSG00000046364	ProperStrand	149	chr7	29136584	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	6	-8.0144
chr17	23955819	23955839	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	chr4	131908236	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	6	-4.6250
chr1	89105750	89105766	protein_coding	Chrng	exon	ENSMUSG00000026253	NonProperStrand	130	chr19	8799581	8799619	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-5.2491
chr18	73693164	73693188	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr4	131825994	131826125	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	4	-7.0561
chr17	45705243	45705307	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr1	134401005	134401021	protein_coding	Rbbp5	utr3	ENSMUSG00000026439	NonProperStrand	33	1	-7.9247
chr7	26126121	26126141	protein_coding	Megf8	exon	ENSMUSG00000045039	ProperStrand	100	chrX	34622906	34622985	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-2.2817
chr9	108436077	108436172	protein_coding	Qrich1	exon	ENSMUSG00000006673	ProperStrand	30	chr4	116991019	116991036	protein_coding	Rnf220	intron	ENSMUSG00000028677	ProperStrand	131	1	-13.1471
chr18	10052132	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr5	44190635	44190651	protein_coding	Fbxl5	intron	ENSMUSG00000039753	ProperStrand	18	1	-11.2407
chr8	13416895	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	6	-7.5035
chr18	83125442	83125482	protein_coding	Zfp516	exon	ENSMUSG00000058881	ProperStrand	25	chr3	108200014	108200030	protein_coding	Celsr2	exon	ENSMUSG00000068740	NonProperStrand	20	1	-17.2448
chr1	135513452	135513470	SINE	B1_Mm	Alu	chr1B1_Mm135513425	ProperStrand	2	chr19	8963087	8963187	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	2	-inf
chr10	75222296	75222338	protein_coding	Cabin1	intron	ENSMUSG00000020196	ProperStrand	62	chr16	23110535	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	6	-14.0927
chr3	63133222	63133322	protein_coding	Mme	intron	ENSMUSG00000027820	ProperStrand	10	chr7	148634767	148634834	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-7.5437
chr5	111812088	111812105	protein_coding	Pitpnb	exon	ENSMUSG00000050017	ProperStrand	137	chr14	76247763	76247780	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-2.6682
chr14	57430482	57430498	protein_coding	Zmym5	utr5	ENSMUSG00000040123	NonProperStrand	1	chr4	131908702	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-inf
chr2	37425445	37425461	protein_coding	Strbp	utr3	ENSMUSG00000026915	NonProperStrand	4	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-8.7752
chrX	162843984	162844001	protein_coding	Ofd1	exon	ENSMUSG00000040586	NonProperStrand	11	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-8.6121
chr3	84935851	84935868	protein_coding	Arfip1	intron	ENSMUSG00000074513	ProperStrand	49	chr9	15119967	15120040	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-7.6573
chr9	18109671	18109738	protein_coding	Chordc1	intron	ENSMUSG00000001774	ProperStrand	5	chr10	23505152	23505204	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-9.7958
chr7	133256371	133256393	protein_coding	Xpo6	exon	ENSMUSG00000000131	ProperStrand	36	chr17	24869755	24869771	protein_coding	Rpl3l	utr5	ENSMUSG00000002500	NonProperStrand	56	1	-14.4836
chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	chr1	162966812	162966860	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	2	-4.6495
chr2	156699124	156699140	protein_coding	1110008F13Rik	utr3	ENSMUSG00000027637	ProperStrand	1	chr17	24857740	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-inf
chr4	25176989	25207663	protein_coding	1810074P20Rik	intron	ENSMUSG00000040359	ProperStrand	10	chr17	24857783	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-9.4148
chr4	148703454	148703544	protein_coding	Ube4b	utr3	ENSMUSG00000028960	ProperStrand	66	chr5	130295451	130295531	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-5.0633
chr1	183853750	183853767	protein_coding	Enah	exon	ENSMUSG00000022995	NonProperStrand	33	chr2	26493360	26493416	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-4.8821
chr4	140881186	140881266	protein_coding	Epha2	intron	ENSMUSG00000006445	ProperStrand	148	chr8	73419683	73419773	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-3.0067
chr2	120365219	120371586	lincRNA	Gm17675	exon	ENSMUSG00000091714	ProperStrand	3	chr4	131908261	131908351	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-7.2242
chr7	29136525	29136550	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	chr13	22003218	22003259	tRNA	tRNA84-AspGTC	.	66469	ProperStrand	10	1	-5.7572
chr6	99210228	99210318	protein_coding-noncoding	Eif4e3	utr3	ENSMUSG00000030068	ProperStrand	1	chr6	99210542	99210632	protein_coding	Foxp1	intron	ENSMUSG00000030067	ProperStrand	16	1	-inf
chr16	34043019	34043037	protein_coding	Kalrn	intron	ENSMUSG00000061751	NonProperStrand	52	chr16	23111372	23111447	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.4615
chr6	64732661	64732751	DNA	Ricksha	MuDR	chr6Ricksha64732593	ProperStrand	1	chr6	64732210	64732290	LTR	MTEa	MaLR	chr6MTEa64732233	NonProperStrand	1	1	-inf
chr6	148881613	148894856	protein_coding	Fam60a	utr5	ENSMUSG00000039985	ProperStrand	68	chr19	8799835	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-4.7055
chr3	101385034	101385052	protein_coding	Atp1a1	intron	ENSMUSG00000033161	ProperStrand	316	chr18	66141604	66141622	protein_coding	Lman1	utr3	ENSMUSG00000041891	ProperStrand	36	1	-11.0146
chr2	90235285	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	56775853	56775870	protein_coding	Snx33	utr5	ENSMUSG00000032733	NonProperStrand	116	3	-8.1326
chr8	34693168	34693184	protein_coding	Tex15	exon	ENSMUSG00000009628	NonProperStrand	31	chr1	162965531	162965557	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.5161
chr6	125112628	125112862	protein_coding	Gapdh	exon	ENSMUSG00000057666	ProperStrand	356	chr12	88778626	88778664	protein_coding	Alkbh1	intron	ENSMUSG00000079036	ProperStrand	70	1	-9.4366
chr7	11486362	11486378	protein_coding	Zscan4b	exon	ENSMUSG00000091643	ProperStrand	2	chr4	131908689	131908739	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-8.0336
chr2	76532512	76532602	protein_coding	Plekha3	intron	ENSMUSG00000002733	ProperStrand	4	chr5	130300470	130300550	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-7.9077
chr7	50872342	50872425	protein_coding	Zfp819	exon	ENSMUSG00000055102	ProperStrand	2	chr11	69483189	69483279	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-9.6187
chr4	147986765	147986850	protein_coding	Masp2	intron	ENSMUSG00000028979	ProperStrand	1	chr12	92811869	92811900	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	1	-inf
chr6	113438172	113438559	protein_coding	Creld1	exon	ENSMUSG00000030284	ProperStrand	4	chr15	74394265	74394284	protein_coding	Bai1	utr5	ENSMUSG00000034730	ProperStrand	22	1	-20.6761
chr3	46250662	46250678	protein_coding	Pabpc4l	exon	ENSMUSG00000090919	ProperStrand	137	chr3	96528242	96528324	snoRNA	ENSMUSG00000065669_SNORA5	.	ENSMUSG00000065669	ProperStrand	180	1	-9.4533
chr14	33005094	33005139	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	chr8	113366288	113366309	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	2	-1.4939
chr14	71077900	71107120	protein_coding	Xpo7	exon	ENSMUSG00000022100	ProperStrand	109	chr4	131865855	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	9	-13.6336
chr9	60675015	60675031	protein_coding	Gm9869	intron	ENSMUSG00000052143	ProperStrand	1	chr16	23111419	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-inf
chr5	116886808	116886898	SINE	MIRb	MIR	chr5MIRb116886830	NonProperStrand	2	chr6	113566524	113566568	protein_coding	6720456B07Rik	utr3	ENSMUSG00000033940	ProperStrand	5	1	-21.6030
chr14	27913309	27913333	protein_coding	Il17rd	exon	ENSMUSG00000040717	ProperStrand	24	chr16	23110918	23111004	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.3518
chr11	5161674	5161693	Simple_repeat	(CCCCG)n	Simple_repeat	chr11(CCCCG)n5161623	ProperStrand	4	chr11	86533029	86533755	protein_coding	Cltc	exon	ENSMUSG00000047126	ProperStrand	319	1	-15.6278
chr7	53299633	53300663	protein_coding	Nomo1	exon	ENSMUSG00000030835	ProperStrand	85	chr5	108333591	108333654	snoRNA	ENSMUSG00000064453_Snord21	.	ENSMUSG00000064453	ProperStrand	201	1	-10.1884
chr2	90235297	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	69298310	69298328	protein_coding	Dnahc2	intron	ENSMUSG00000005237	NonProperStrand	6	1	-9.1372
chr17	27741806	27741886	protein_coding	Nudt3	intron	ENSMUSG00000024213	ProperStrand	26	chr16	23111414	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.5788
chr8	107058214	107058231	protein_coding	Nae1	intron	ENSMUSG00000031878	NonProperStrand	2	chr8	73419657	73419712	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-10.3981
chr4	40923471	40923551	protein_coding	Nfx1	exon	ENSMUSG00000028423	ProperStrand	39	chr1	162967491	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	4	-13.8107
chr6	87950449	87950469	protein_coding	Rab7	exon	ENSMUSG00000079477	ProperStrand	33	chr1	89673651	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	2	-7.3297
chr7	51503462	51503525	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	chr11	77996559	77996621	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-1.8031
chr4	154735396	154735486	protein_coding	Prkcz	utr5	ENSMUSG00000029053	ProperStrand	15	chr10	110918552	110918632	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-6.1363
chr2	65962716	65962732	protein_coding	Galnt3	utr5	ENSMUSG00000026994	ProperStrand	4	chr7	117189982	117190041	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-8.8371
chr11	68067261	68067277	protein_coding	Ntn1	intron	ENSMUSG00000020902	NonProperStrand	194	chr1	155074758	155074822	protein_coding	Lamc1	exon	ENSMUSG00000026478	ProperStrand	239	1	-8.1943
chr10	110933313	110933373	protein_coding	Nap1l1	utr3	ENSMUSG00000058799	ProperStrand	185	chr19	8799844	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-2.8536
chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	chr2	104610274	104610345	protein_coding	Qser1	exon	ENSMUSG00000074994	ProperStrand	22	1	-9.0007
chr2	92048154	92048244	protein_coding	Phf21a	intron	ENSMUSG00000058318	ProperStrand	25	chr4	131865390	131865470	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-5.6979
chr7	52263401	52263501	protein_coding	Scaf1	exon	ENSMUSG00000038406	ProperStrand	81	chr4	131908236	131908276	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.0135
chr17	12902300	12902366	protein_coding	Igf2r	exon	ENSMUSG00000023830	ProperStrand	151	chr11	69481335	69481386	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-1.6519
chr1	121195541	121195560	LTR	MLT1D	MaLR	chr1MLT1D121195487	NonProperStrand	1	chr11	119464503	119464593	protein_coding	Rptor	utr5	ENSMUSG00000025583	NonProperStrand	13	1	-inf
chr8	112710231	112710248	LINE	L1MD3	L1	chr8L1MD3112710157	NonProperStrand	1	chrX	34622976	34623037	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-inf
chr5	116428176	116428266	protein_coding	Cit	intron	ENSMUSG00000029516	ProperStrand	45	chr5	108334239	108336487	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	3	-12.5881
chr4	11083674	11091517	protein_coding	Trp53inp1	utr5	ENSMUSG00000028211	ProperStrand	35	chr9	104955754	104956752	protein_coding	Mrpl3	exon	ENSMUSG00000032563	ProperStrand	13	1	-17.5535
chr16	90386834	90386853	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	chr19	8800377	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	4	-9.1255
chr10	89512698	89512714	protein_coding	Anks1b	exon	ENSMUSG00000058589	ProperStrand	68	chr17	35299522	35299560	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-4.5369
chr14	76956323	76956339	protein_coding	Serp2	utr5	ENSMUSG00000052584	NonProperStrand	41	chr16	23111442	23111503	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.8215
chr7	140183416	140183444	protein_coding	Ctbp2	exon	ENSMUSG00000030970	ProperStrand	89	chr2	22444818	22444908	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-6.9918
chr1	173433177	173433292	protein_coding	B930036N10Rik	utr3	ENSMUSG00000091993	ProperStrand	150	chr16	23111754	23111814	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	5	-4.8636
chr16	36886302	36887328	antisense	4930565N06Rik	.	ENSMUSG00000084834	ProperStrand	27	chr1	153815518	153815547	protein_coding	1700025G04Rik	intron	ENSMUSG00000032666	NonProperStrand	35	1	-16.0264
chr6	45965480	46120177	protein_coding	Cntnap2	exon	ENSMUSG00000039419	NonProperStrand	283	chr7	117189982	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-0.8977
chr8	109177809	109180746	protein_coding	Cdh1	exon	ENSMUSG00000000303	ProperStrand	283	chr1	134018692	134018903	protein_coding	Cdk18	exon	ENSMUSG00000026437	ProperStrand	51	1	-10.5315
chr10	82695275	82695292	protein_coding	Slc41a2	utr3	ENSMUSG00000034591	NonProperStrand	8	chr9	120039623	120039687	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-7.2948
chr15	36538340	36538386	protein_coding	Pabpc1	utr5	ENSMUSG00000022283	ProperStrand	908	chr7	54442442	54442524	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	1	-6.1892
chr12	60232432	60232449	protein_coding	Ctage5	utr5	ENSMUSG00000021000	NonProperStrand	3	chr19	34392966	34392986	protein_coding	Fas	intron	ENSMUSG00000024778	ProperStrand	11	1	-20.0073
chr2	71085921	71085937	protein_coding	Dync1i2	exon	ENSMUSG00000027012	NonProperStrand	58	chr1	162966811	162966841	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-6.3259
chr4	106770704	106770721	protein_coding	Cdcp2	intron	ENSMUSG00000047636	NonProperStrand	35	chr7	108440949	108440967	protein_coding	Atg16l2	intron	ENSMUSG00000047767	ProperStrand	121	1	-12.9933
chr3	156224612	156224628	lincRNA	4930570G19Rik	exon	ENSMUSG00000085084	ProperStrand	326	chr4	131865380	131865456	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	2	-2.2721
chr15	51630836	51674024	protein_coding	Eif3h	exon	ENSMUSG00000022312	ProperStrand	45	chr7	116083727	116084179	protein_coding	Eif3f	exon	ENSMUSG00000031029	ProperStrand	69	1	-13.6147
chr11	120208993	120209037	protein_coding	Actg1	exon	ENSMUSG00000062825	ProperStrand	178	chr16	23111770	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-1.1086
chr14	51427119	51427219	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr11	77995189	77995237	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-0.8889
chr18	9877637	9877727	protein_coding	Colec12	utr3	ENSMUSG00000036103	NonProperStrand	10	chr2	177262744	177262834	protein_coding	Gm14420	utr3	ENSMUSG00000078866	ProperStrand	1	1	-inf
chr6	54988053	54996476	protein_coding	Gars	exon	ENSMUSG00000029777	ProperStrand	71	chr7	117189944	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-5.2300
chr5	152198645	152198661	lincRNA	1700028E10Rik	exon	ENSMUSG00000087548	ProperStrand	53	mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	1	-6.1480
chr13	23713822	23713840	protein_coding	Hist1h1e	exon	ENSMUSG00000051627	ProperStrand	41	chrX	71517832	71517889	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-7.3034
chr7	52084715	52084805	protein_coding	Nup62	exon	ENSMUSG00000043858	ProperStrand	47	chr1	88247795	88247875	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-5.5734
chr12	32011492	32012518	protein_coding	Lamb1	exon	ENSMUSG00000002900	ProperStrand	87	chr9	15118344	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-4.8702
chr9	78326631	78326773	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr5	33711331	33713105	protein_coding	Maea	exon	ENSMUSG00000079562	ProperStrand	32	1	-7.5874
chr19	24552582	24552600	protein_coding	Pip5k1b	intron	ENSMUSG00000024867	NonProperStrand	40	chr11	106362640	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-8.2160
chr5	136333035	136333053	protein_coding	Srrm3	utr3	ENSMUSG00000039860	ProperStrand	41	chr5	130300420	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.1822
chr7	3655643	3655934	protein_coding	Rps9	utr5	ENSMUSG00000006333	ProperStrand	87	chr7	109147648	109147694	protein_coding	Numa1	exon	ENSMUSG00000066306	ProperStrand	148	1	-10.7541
chr7	34987225	34987304	protein_coding	Gpi1	utr3	ENSMUSG00000036427	ProperStrand	288	chr2	158182155	158182276	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	2	-3.8453
chr12	113894788	113894991	protein_coding	Akt1	exon	ENSMUSG00000001729	ProperStrand	9	chr5	125029026	125029042	protein_coding	Eif2b1	utr5	ENSMUSG00000029388	ProperStrand	51	1	-17.5372
chr7	28960897	28960940	protein_coding	Fbl	exon	ENSMUSG00000046865	ProperStrand	52	chr5	108336412	108336490	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	3	-12.1277
chr9	108594652	108594669	protein_coding	Prkar2a	utr5	ENSMUSG00000032601	ProperStrand	43	chr5	108336363	108336421	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-5.5297
chr19	7501247	7501347	protein_coding	Rtn3	utr3	ENSMUSG00000024758	ProperStrand	35	chr18	24644441	24644463	protein_coding	Rprd1a	utr3	ENSMUSG00000040446	ProperStrand	21	3	-20.3438
chr16	91405676	91405692	protein_coding	Ifnar2	utr3	ENSMUSG00000022971	NonProperStrand	23	chr8	96555093	96556264	protein_coding	Nudt21	exon	ENSMUSG00000031754	ProperStrand	33	1	-16.3962
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr18	37673599	37673615	protein_coding	Pcdhb21	exon	ENSMUSG00000044022	NonProperStrand	23	1	-7.8177
chr10	12383333	12384831	protein_coding	Utrn	exon	ENSMUSG00000019820	ProperStrand	69	chr14	33005038	33005059	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-3.7322
chr11	50115310	50115356	protein_coding	Canx	exon	ENSMUSG00000020368	ProperStrand	296	chr9	120038622	120038675	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	3	-2.3469
chr2	158205317	158205405	snoRNA	ENSMUSG00000064585_SNORA71	.	ENSMUSG00000064585	ProperStrand	418	chr17	13112450	13112511	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-1.2552
chr7	17007745	17007761	protein_coding	Zc3h4	exon	ENSMUSG00000059273	ProperStrand	95	chr7	29136524	29136601	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-4.6807
chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	chr3	134924498	134924514	protein_coding	Cenpe	exon	ENSMUSG00000045328	ProperStrand	71	1	-12.2285
chr18	36926571	36926897	protein_coding	Hars	exon	ENSMUSG00000001380	ProperStrand	23	chr10	110918599	110918679	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	5	-19.6701
chr1	91358413	91358430	protein_coding	Agap1	intron	ENSMUSG00000055013	ProperStrand	229	chr15	34370545	34370623	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-1.3256
chr11	51810584	51810616	protein_coding	Ube2b	intron	ENSMUSG00000020390	ProperStrand	57	chr11	77995188	77995242	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	2	-10.1897
chr5	54354849	54354939	SINE	B1_Mm	Alu	chr5B1_Mm54354836	ProperStrand	1	chr5	54354635	54354725	SINE	B1_Mur2	Alu	chr5B1_Mur254354642	ProperStrand	1	1	-inf
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr9	48707950	48707967	protein_coding	Htr3a	exon	ENSMUSG00000032269	NonProperStrand	20	1	-10.9393
chr13	80247040	80247058	LTR	RMER17B	ERVK	chr13RMER17B80246228	ProperStrand	3	chr4	40879910	40879928	SINE	B3A	B2	chr4B3A40879892	ProperStrand	1	1	-inf
chr17	35299506	35299540	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	chr3	85942731	85942780	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	1	-1.6129
chr14	76247764	76247839	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	chr11	116533861	116533893	snoRNA	ENSMUSG00000065640_Snord1c	.	ENSMUSG00000065640	ProperStrand	373	1	-1.1197
chr5	35250159	35250239	protein_coding	Htt	exon	ENSMUSG00000029104	ProperStrand	73	chr10	75503065	75503155	protein_coding	Zfp280b	utr3	ENSMUSG00000049764	ProperStrand	25	1	-14.6920
chr9	20713152	20713586	protein_coding	Dnmt1	exon	ENSMUSG00000004099	ProperStrand	91	chr2	166890535	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-6.7299
chr1	162967510	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	chr9	15116999	15117099	snoRNA	ENSMUSG00000077614_SNORA40	.	ENSMUSG00000077614	ProperStrand	54	1	-3.6691
chr9	21560700	21561600	protein_coding	Spc24	exon	ENSMUSG00000074476	ProperStrand	19	chr6	71832621	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-7.9078
chr6	47738070	47738109	misc_RNA	Y_RNA	.	ENSMUSG00000065701	ProperStrand	129	chr2	26768369	26768433	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-4.1292
chr14	44621439	44621464	LTR	MMETn-int	ERVK	chr14MMETn-int44621009	NonProperStrand	1	chr16	23110891	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr15	58577335	58577351	protein_coding	Fer1l6	intron	ENSMUSG00000037106	ProperStrand	54	chr14	33005038	33005093	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-4.1926
chr6	65820428	65820446	protein_coding	Prdm5	exon	ENSMUSG00000029913	ProperStrand	50	chr10	23505152	23505214	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.4914
chr9	79915104	79915120	protein_coding	Senp6	utr5	ENSMUSG00000034252	ProperStrand	110	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.2201
chr18	35097699	35097730	protein_coding	Hspa9	utr3	ENSMUSG00000024359	ProperStrand	166	chr6	92801245	92801263	protein_coding	Adamts9	intron	ENSMUSG00000030022	ProperStrand	27	1	-12.8862
chr8	73419657	73419757	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	chr10	127895517	127895568	tRNA	tRNA688-SerCGA	.	1103941	ProperStrand	71	1	-2.8304
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr8	32260335	32260439	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	3	-2.7866
chr11	62416599	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	NonProperStrand	13	chr11	51551353	51551424	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	NonProperStrand	1	1	-inf
chr16	22059908	22162053	protein_coding	Igf2bp2	utr3	ENSMUSG00000033581	ProperStrand	23	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-8.2386
chr3	85448965	85456213	protein_coding	Pet112l	exon	ENSMUSG00000028085	ProperStrand	81	chr9	120039533	120039575	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.7818
chr17	46680281	46680298	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr9	78326948	78327154	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-2.5083
chr6	122678341	122678421	protein_coding	Slc2a3	utr3	ENSMUSG00000003153	ProperStrand	682	chr3	101386030	101386637	protein_coding	Atp1a1	exon	ENSMUSG00000033161	ProperStrand	316	1	-5.1739
chr10	60896089	60896187	protein_coding	Eif4ebp2	utr3	ENSMUSG00000020091	ProperStrand	39	chr9	15118348	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-4.2742
chr2	26768409	26768433	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	chr17	24856619	24856719	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	4	-1.8616
chr13	51743567	51743661	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	chr2	32818904	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	4	-2.3189
chr7	31226138	31226721	protein_coding	Aplp1	exon	ENSMUSG00000006651	ProperStrand	29	chr16	23110555	23110578	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.7712
chr11	78338409	78338426	protein_coding	Tnfaip1	utr3	ENSMUSG00000017615	ProperStrand	30	chr8	73419742	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.4253
chr9	78023109	78023149	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr7	52382014	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	2	-1.0349
chr2	24910034	24910050	protein_coding	Nelf	utr5	ENSMUSG00000006476	NonProperStrand	20	chr10	116493184	116493203	protein_coding	Cct2	exon	ENSMUSG00000034024	ProperStrand	100	1	-14.5214
chr8	13416896	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr8	109459671	109459783	protein_coding	Sntb2	utr5	ENSMUSG00000041308	ProperStrand	41	1	-7.2115
chr5	118376503	118376519	protein_coding	Nos1	exon	ENSMUSG00000029361	NonProperStrand	237	chr8	129468767	129468867	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-1.9681
chr8	108716268	108716356	protein_coding	Slc7a6	exon	ENSMUSG00000031904	ProperStrand	22	chr10	80644248	80644321	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-8.1062
chr10	88248839	88248908	protein_coding	Utp20	exon	ENSMUSG00000004356	ProperStrand	45	chr7	29136623	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.8631
chr15	77597977	77597993	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr5	147646720	147646793	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	2	-6.0806
chr8	86518736	86519199	protein_coding	Prkaca	exon	ENSMUSG00000005469	ProperStrand	17	chr3	89904260	89904294	protein_coding	Tpm3	utr3	ENSMUSG00000027940	ProperStrand	55	1	-16.0420
chr10	79476104	79476123	protein_coding	Abca7	exon	ENSMUSG00000035722	ProperStrand	12	chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	2	-18.5197
chr18	41356147	41356183	miRNA	Mir5097	dead	ENSMUSG00000093361	ProperStrand	221	chr6	70794803	70794820	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	1	-8.8103
chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	chr5	108334195	108334221	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-1.4765
chr9	121547719	121547736	protein_coding	Lyzl4	intron	ENSMUSG00000032530	NonProperStrand	10	chr18	73693168	73693187	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-9.1448
chr9	21151143	21151233	protein_coding	Slc44a2	exon	ENSMUSG00000057193	ProperStrand	26	chr12	55835624	55835704	snRNA	ENSMUSG00000075960_U1	.	ENSMUSG00000075960	ProperStrand	210	1	-12.4943
chr2	179322379	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr11	58795625	58795642	protein_coding	Trim11	exon	ENSMUSG00000020455	ProperStrand	43	1	-11.8839
chr13	55418725	55418821	protein_coding	Nsd1	utr3	ENSMUSG00000021488	ProperStrand	186	chrX	34622906	34622935	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-1.3253
chr19	47418346	47418446	protein_coding	Sh3pxd2a	intron	ENSMUSG00000053617	ProperStrand	57	chr7	117190029	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.4262
chr2	93040992	93041050	protein_coding	Trp53i11	utr3	ENSMUSG00000068735	ProperStrand	46	chr4	131908357	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.8186
chr7	30074412	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr19	47970971	47970987	protein_coding	Itprip	utr3	ENSMUSG00000079254	ProperStrand	75	1	-9.9800
chr14	56159296	56159312	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	chr10	110918643	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-1.4687
chr5	111095050	111095581	protein_coding	Ep400	exon	ENSMUSG00000029505	ProperStrand	176	chr9	15514257	15514276	protein_coding	Slc36a4	exon	ENSMUSG00000043885	ProperStrand	94	1	-10.2523
chr11	99071347	99071437	protein_coding	Smarce1	utr3	ENSMUSG00000037935	ProperStrand	38	chr9	120039533	120039613	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-4.1704
chr5	121656780	121656813	protein_coding	Rpl6	exon	ENSMUSG00000029614	ProperStrand	332	chr9	59526543	59526622	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	1	-3.8623
chr7	150482401	150482418	protein_coding	Kcnq1	intron	ENSMUSG00000009545	ProperStrand	59	chr11	106362639	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-7.4380
chr3	95960008	95960098	protein_coding	Otud7b	utr3	ENSMUSG00000038495	ProperStrand	11	chr5	130300465	130300545	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-5.7288
chr6	120901325	120901342	protein_coding	Mical3	exon	ENSMUSG00000051586	ProperStrand	104	chr7	116663664	116663698	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.6231
chr14	102053211	102053275	protein_coding	Uchl3	utr5	ENSMUSG00000022111	ProperStrand	12	chr7	29136525	29136574	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.3856
chr4	140121137	140121153	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.8777
chr11	43247309	43250850	protein_coding	Slu7	utr5	ENSMUSG00000020409	ProperStrand	7	chr15	5068407	5068471	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-10.4600
chr6	49211123	49211182	protein_coding	Tra2a	intron	ENSMUSG00000029817	ProperStrand	54	chr7	116664819	116664909	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.7317
chr11	95823823	95823942	protein_coding	Igf2bp1	utr3	ENSMUSG00000013415	ProperStrand	140	chr8	13876097	13876230	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	2	-8.9534
chr6	89059111	89059200	protein_coding	4933427D06Rik	utr3	ENSMUSG00000055403	ProperStrand	12	chr16	23111770	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-11.7745
chr9	61761263	61761312	protein_coding	Rplp1	exon	ENSMUSG00000007892	ProperStrand	116	chr2	79843543	79843559	protein_coding	Pde1a	intron	ENSMUSG00000059173	NonProperStrand	275	1	-8.9403
chr13	103895241	103895257	protein_coding	Mast4	intron	ENSMUSG00000034751	ProperStrand	150	chr19	8798740	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-3.0908
chr1	162965539	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr4	116827793	116827820	snoRNA	ENSMUSG00000064751_SNORD46	.	ENSMUSG00000064751	ProperStrand	132	3	-5.3299
chr4	86500731	86500756	protein_coding	Rps6	exon	ENSMUSG00000028495	ProperStrand	263	chr15	34370546	34370636	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-2.2069
chr14	61057536	61057554	LTR	RLTR22_Mus	ERVK	chr14RLTR22_Mus61057509	ProperStrand	6	chr10	90432659	90432677	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	1	-15.3655
chr10	79879959	79880062	protein_coding	Tcf3	exon	ENSMUSG00000020167	NonProperStrand	24	chr15	73416617	73416633	protein_coding	Slc45a4	exon	ENSMUSG00000079020	ProperStrand	127	1	-13.6659
chr5	116457983	116458063	protein_coding	Cit	utr3	ENSMUSG00000029516	ProperStrand	45	chr7	29136599	29136638	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.8631
chr13	75905619	75905651	protein_coding	Ell2	intron	ENSMUSG00000001542	ProperStrand	110	chr5	121655017	121655126	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	11	-inf
chr2	89368462	89368480	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	chr13	51743580	51743703	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	4	-12.9271
chr4	114741487	114741504	protein_coding	Tal1	utr3	ENSMUSG00000028717	NonProperStrand	69	chr11	77996578	77996611	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-5.8172
chr11	116535948	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr2	166888978	166889031	snoRNA	ENSMUSG00000077515_SNORD12	.	ENSMUSG00000077515	ProperStrand	191	2	-6.2398
chr2	90235293	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	149092917	149093007	protein_coding	Tmem201	exon	ENSMUSG00000044700	ProperStrand	60	1	-4.4627
chr13	53285957	53377194	protein_coding	Ror2	intron	ENSMUSG00000021464	ProperStrand	46	chr4	131866155	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	3	-10.1081
chr9	57217029	57217046	LINE	Lx4A	L1	chr9Lx4A57216705	ProperStrand	16	chr17	67712818	67712835	LTR	ORR1E	MaLR	chr17ORR1E67712788	ProperStrand	39	1	-16.8515
chr7	34990833	34990923	protein_coding	Gpi1	exon	ENSMUSG00000036427	ProperStrand	288	chr11	117223263	117223343	protein_coding	Sept9	utr3	ENSMUSG00000059248	ProperStrand	60	1	-10.1695
chr8	79247478	79247568	lincRNA	Gm10649	intron	ENSMUSG00000074235	ProperStrand	6	chr12	62788701	62788781	protein_coding	Lrfn5	intron	ENSMUSG00000035653	ProperStrand	2	1	-inf
chr16	23111909	23113279	protein_coding	Eif4a2	exon	ENSMUSG00000022884	ProperStrand	356	chr5	23013278	23013343	protein_coding	Srpk2	utr3	ENSMUSG00000062604	ProperStrand	51	1	-10.0731
chr6	83706689	83706850	protein_coding	Atp6v1b1	exon	ENSMUSG00000006269	ProperStrand	2	chr11	62418036	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-12.9780
chr17	75090352	75090492	protein_coding	Birc6	exon	ENSMUSG00000024073	ProperStrand	110	chr5	65952377	65952395	protein_coding	Ube2k	intron	ENSMUSG00000029203	ProperStrand	289	1	-8.9474
chr9	88298238	88299197	protein_coding	Snx14	exon	ENSMUSG00000032422	ProperStrand	13	chr11	69481387	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-6.1585
chr8	125095245	125095267	protein_coding	Cdt1	exon	ENSMUSG00000006585	ProperStrand	47	chr18	35716832	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-6.8055
chr1	52982568	53009538	protein_coding	1700019D03Rik	utr5	ENSMUSG00000043629	ProperStrand	39	chr19	8963096	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.0232
chr17	29967772	29967790	protein_coding	Mdga1	utr3	ENSMUSG00000043557	NonProperStrand	8	chr13	51743567	51743662	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	4	-19.1337
chr11	43543654	43543754	protein_coding	Ttc1	utr3	ENSMUSG00000041278	ProperStrand	13	chr18	35716847	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.9970
chr2	90235291	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	127556369	127556397	protein_coding	Baz2a	exon	ENSMUSG00000040054	ProperStrand	274	2	-3.2570
chr2	101882113	101882203	protein_coding	Ldlrad3	intron	ENSMUSG00000048058	ProperStrand	53	chr12	92811930	92812010	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	1	-8.8200
chr14	76247741	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	chr11	106362606	106362642	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	4	-1.2105
chr11	72553558	72553989	protein_coding	Ankfy1	exon	ENSMUSG00000020790	ProperStrand	68	chr7	116664852	116664924	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.3360
chr12	72932174	72996720	protein_coding	Daam1	utr5	ENSMUSG00000034574	NonProperStrand	15	chr14	76247711	76247835	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-6.9035
chr1	137362507	137362586	protein_coding	Nav1	exon	ENSMUSG00000009418	ProperStrand	38	chr1	162967514	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.3319
chr10	109204438	109204455	protein_coding	Nav3	exon	ENSMUSG00000020181	NonProperStrand	8	chr16	57391761	57391792	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	1	-11.9228
chr3	95422645	95422745	protein_coding	Golph3l	utr3	ENSMUSG00000046519	ProperStrand	4	chr16	23110909	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.6489
chr19	12748914	12748930	protein_coding	Olfr1442	exon	ENSMUSG00000044441	NonProperStrand	1	chr2	130101243	130101295	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-inf
chr13	107697796	107697886	protein_coding	Ipo11	intron	ENSMUSG00000042590	ProperStrand	120	chr7	116664795	116664875	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.4444
chr7	86843599	86843684	protein_coding	Kif7	exon	ENSMUSG00000050382	ProperStrand	12	chr10	110918549	110918639	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-6.5914
chr4	43505793	43505873	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr4	43042399	43042489	protein_coding	Stoml2	exon	ENSMUSG00000028455	ProperStrand	8	1	-7.0216
chr14	73096179	73096259	protein_coding	Fndc3a	intron	ENSMUSG00000033487	ProperStrand	84	chr14	34780662	34780752	protein_coding	Zfp488	utr3	ENSMUSG00000044519	ProperStrand	54	1	-12.8514
chr14	69964653	69964743	protein_coding	Entpd4	intron	ENSMUSG00000022066	ProperStrand	17	chr12	17552966	17553046	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-7.6001
chr7	76171499	76171589	LINE	L1MEf	L1	chr7L1MEf76171481	ProperStrand	1	chrX	124755103	124755193	LINE	L1_Mur2	L1	chrXL1_Mur2124753758	ProperStrand	1	1	-inf
chr9	14351013	14351038	protein_coding	Amotl1	utr3	ENSMUSG00000013076	ProperStrand	72	chr2	168426897	168426915	protein_coding	Nfatc2	intron	ENSMUSG00000027544	NonProperStrand	49	1	-13.3600
chr11	98018268	98018376	protein_coding	Med1	exon	ENSMUSG00000018160	ProperStrand	23	chr7	29136526	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-6.9265
chr10	10767428	10767447	protein_coding	Grm1	intron	ENSMUSG00000019828	NonProperStrand	17	chr2	130101241	130101308	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-9.1316
chr8	64242012	64242032	protein_coding	Palld	intron	ENSMUSG00000058056	NonProperStrand	125	chr1	162965554	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.0118
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr17	36000485	36000501	protein_coding	Nrm	exon	ENSMUSG00000059791	ProperStrand	253	1	-6.0492
chr5	74489266	74489323	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr13	69027157	69027177	protein_coding	Adcy2	intron	ENSMUSG00000021536	NonProperStrand	16	1	-8.2701
chr17	45705021	45705067	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr4	122633989	122634006	protein_coding	Mfsd2a	exon	ENSMUSG00000028655	NonProperStrand	3	1	-13.0810
chr15	81354775	81354791	SINE	B3A	B2	chr15B3A81354761	ProperStrand	16	chr19	8963129	8963164	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.7073
chr1	115800537	115800555	lincRNA	9330185C12Rik	intron	ENSMUSG00000086520	ProperStrand	45	chr4	131865855	131865987	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.2312
chr13	58112590	58115201	protein_coding	Klhl3	exon	ENSMUSG00000014164	ProperStrand	4	chr15	34372463	34372486	protein_coding	Rpl30	exon	ENSMUSG00000058600	ProperStrand	65	1	-18.8568
chr11	80707575	80707593	protein_coding	Accn1	exon	ENSMUSG00000020704	ProperStrand	69	chr19	8800355	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-3.2742
chr15	26472289	26472305	SINE	MIR	MIR	chr15MIR26472217	ProperStrand	5	chr11	116704533	116704549	protein_coding	Jmjd6	utr5	ENSMUSG00000056962	ProperStrand	92	1	-17.5398
chr5	122904434	122904452	protein_coding	Atp2a2	intron	ENSMUSG00000029467	ProperStrand	166	chr6	125078857	125078930	protein_coding	Chd4	exon	ENSMUSG00000063870	ProperStrand	303	4	-inf
chr6	28566020	28566120	protein_coding	Snd1	intron	ENSMUSG00000001424	ProperStrand	210	chr17	35087894	35087948	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-2.8617
chr10	94977832	95003889	protein_coding	Ube2n	exon	ENSMUSG00000074781	ProperStrand	10	chr11	97643012	97643092	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-5.8808
chr11	87236446	87236536	snRNA	ENSMUSG00000070246_U1	.	ENSMUSG00000070246	ProperStrand	8	chr17	26360446	26360526	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	1	-14.1696
chr19	7345630	7345730	protein_coding	Rcor2	intron	ENSMUSG00000024968	ProperStrand	120	chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	1	-7.3802
chr2	152146325	152146368	protein_coding	Rbck1	intron	ENSMUSG00000027466	ProperStrand	30	chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-7.8385
chr17	14041705	14041770	protein_coding	Mllt4	utr3	ENSMUSG00000068036	ProperStrand	156	chr4	131865378	131865468	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-2.2938
chr2	158185612	158185654	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr18	75161133	75161173	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	1	-2.4613
chr13	25002384	25002474	protein_coding	Aldh5a1	utr3	ENSMUSG00000035936	ProperStrand	13	chr18	33954816	33954896	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	3	-15.0816
chr4	57257928	57262781	protein_coding	Ptpn3	exon	ENSMUSG00000038764	ProperStrand	48	chr9	15119748	15119968	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-5.2316
chr7	4762082	4762116	protein_coding	Ube2s	exon	ENSMUSG00000060860	ProperStrand	62	chr8	129468746	129468780	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	3	-10.4695
chr1	34238963	34238979	protein_coding	Dst	exon	ENSMUSG00000026131	ProperStrand	461	chr4	131865392	131865460	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-0.7557
chr18	82773672	82773688	protein_coding	Zfp236	exon	ENSMUSG00000041258	NonProperStrand	117	chr4	131865855	131865949	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-4.1558
chr6	113027606	113027696	protein_coding	Setd5	utr5	ENSMUSG00000034269	ProperStrand	162	chr2	158451026	158451043	protein_coding	Actr5	exon	ENSMUSG00000037761	NonProperStrand	94	4	-18.8402
chr2	31890161	31890261	protein_coding	Nup214	exon	ENSMUSG00000001855	ProperStrand	62	chr7	116663689	116663762	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.4557
chr6	115757990	115758090	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr19	44188492	44188545	snoRNA	ENSMUSG00000077391_SNORA12	.	ENSMUSG00000077391	ProperStrand	506	1	-1.6471
chr18	78952127	78952227	protein_coding	Setbp1	exon	ENSMUSG00000024548	ProperStrand	18	chr7	117166827	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	9	-19.5263
chr4	116827119	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	chr7	52381973	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	2	-2.1693
chr8	106976637	106976653	protein_coding	Ccdc79	exon	ENSMUSG00000052616	NonProperStrand	57	chr1	43611723	43611775	protein_coding	Nck2	intron	ENSMUSG00000066877	ProperStrand	21	1	-15.5212
chr9	63868722	63868738	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	chr18	74938212	74938312	snoRNA	ENSMUSG00000089235_SCARNA17	.	ENSMUSG00000089235	ProperStrand	1128	1	-2.9315
chr19	36190009	36190026	protein_coding	Ankrd1	exon	ENSMUSG00000024803	ProperStrand	11	chr18	75161534	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	2	-16.8015
chr3	28906435	28906452	LINE	Lx8	L1	chr3Lx828906382	ProperStrand	2	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-8.7800
chr5	125509095	125509112	protein_coding	Ncor2	exon	ENSMUSG00000029478	NonProperStrand	20	chr2	26494708	26494775	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.1919
chr14	58212749	58212839	protein_coding	Xpo4	exon	ENSMUSG00000021952	ProperStrand	39	chr13	49779722	49779802	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-7.8741
chr8	119098908	119099008	protein_coding	Cdyl2	utr3	ENSMUSG00000031758	ProperStrand	35	chr4	122970469	122970524	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-8.4951
chr9	15120988	15121088	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	chr8	32260335	32260387	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-1.4911
chr18	37456851	37456868	protein_coding	Pcdhb2	exon	ENSMUSG00000051599	ProperStrand	7	chr2	26494776	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-7.3461
chr5	74489202	74489254	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr5	30694490	30694507	protein_coding	Otof	intron	ENSMUSG00000062372	NonProperStrand	6	1	-10.3398
chr8	44269135	44270715	protein_coding	Triml2	exon	ENSMUSG00000091490	ProperStrand	32	chr9	15119703	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.7682
chr7	109136829	109136958	protein_coding	Numa1	intron	ENSMUSG00000066306	NonProperStrand	171	chrX	34622906	34622931	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-2.7149
chr15	77591660	77591772	protein_coding	Myh9	utr3	ENSMUSG00000022443	ProperStrand	570	chr13	21371618	21371643	tRNA	tRNA74-ArgTCG	.	1561603	ProperStrand	7	1	-13.2341
chr6	83756986	83757016	protein_coding	Paip2b	utr3	ENSMUSG00000045896	ProperStrand	19	chr5	108336363	108336417	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-11.5647
chr2	90235298	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	74746029	74746046	protein_coding	Fam32a	intron	ENSMUSG00000003039	ProperStrand	11	1	-7.8469
chr10	98377871	98377888	protein_coding	Atp2b1	utr5	ENSMUSG00000019943	NonProperStrand	5	chr15	34370616	34370676	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-8.5662
chr10	119665172	119668271	protein_coding	Llph	exon	ENSMUSG00000020224	ProperStrand	9	chr7	148634760	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-7.7646
chr12	88488443	88496424	protein_coding	Pomt2	exon	ENSMUSG00000034126	NonProperStrand	331	chr19	8799581	8799640	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-3.4833
chr17	35087939	35089205	processed_transcript	1110038B12Rik	.	ENSMUSG00000092203	ProperStrand	126	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-3.4922
chr3	68889026	68889145	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	chr1	173041631	173041649	tRNA	tRNA710-ValCAC	.	863590	ProperStrand	206	1	-1.2501
chr2	57090809	57090827	protein_coding	Gpd2	utr5	ENSMUSG00000026827	ProperStrand	93	chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	1	-8.3969
chr9	64026148	64026194	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	chr1	63225607	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	8	-18.6778
chr5	134615249	134615265	protein_coding	Gatsl2	utr3	ENSMUSG00000015944	NonProperStrand	6	chr11	62416599	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-15.8356
chr16	53184797	53184887	LINE	L1_Mur2	L1	chr16L1_Mur253184423	NonProperStrand	1	chr16	53185009	53185089	LINE	Lx5	L1	chr16Lx553184898	NonProperStrand	1	1	-inf
chr19	7016872	7016889	protein_coding	Bad	exon	ENSMUSG00000024959	ProperStrand	4	chr16	23110909	23110961	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.6489
chr3	104600039	104600281	protein_coding	Mov10	exon	ENSMUSG00000002227	ProperStrand	96	chr2	33494731	33494749	protein_coding	Lmx1b	intron	ENSMUSG00000038765	NonProperStrand	5	1	-17.4042
chr10	60895547	60895601	protein_coding	Eif4ebp2	utr3	ENSMUSG00000020091	ProperStrand	39	chr2	73656976	73657016	protein_coding	Atf2	utr3	ENSMUSG00000027104	ProperStrand	37	1	-15.1490
chr1	138400855	138400881	protein_coding	Kif14	intron	ENSMUSG00000041498	NonProperStrand	36	chr3	123210912	123210976	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	NonProperStrand	45	1	-14.9292
chr12	86685276	86691783	protein_coding	Tmed10	exon	ENSMUSG00000021248	ProperStrand	34	chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	1	-10.0486
chr1	137361494	137361514	protein_coding	Nav1	intron	ENSMUSG00000009418	NonProperStrand	60	chr12	31580147	31580208	protein_coding	Acp1	utr3	ENSMUSG00000044573	ProperStrand	12	1	-16.6045
chr7	97592525	97592571	protein_coding	Crebzf	exon	ENSMUSG00000051451	ProperStrand	24	chr18	73693110	73693136	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-7.3454
chr11	74633384	74633400	protein_coding	Mettl16	utr3	ENSMUSG00000010554	NonProperStrand	15	chr17	24665421	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-7.7031
chr2	181674676	181674736	LTR	ORR1A3	MaLR	chr2ORR1A3181674498	ProperStrand	1	chr16	23111728	23111818	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-inf
chr7	74877235	74877325	protein_coding	Synm	utr3	ENSMUSG00000030554	ProperStrand	15	chr2	26494716	26494796	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.7664
chr17	35959686	35959766	protein_coding	Ier3	utr3	ENSMUSG00000003541	ProperStrand	3	chr2	26767043	26767580	protein_coding	Rpl7a	exon	ENSMUSG00000062647	ProperStrand	234	2	-inf
chr10	80235882	80236489	protein_coding	Dot1l	exon	ENSMUSG00000061589	ProperStrand	48	chr18	35102297	35102342	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-7.0334
chr12	60173952	60173969	protein_coding	Pnn	utr3	ENSMUSG00000020994	ProperStrand	42	chr5	130295452	130295555	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	8	-20.0940
mmu-miR-2137	0	19	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	chr4	124796957	124796973	protein_coding	Zc3h12a	exon	ENSMUSG00000042677	ProperStrand	37	1	-12.5310
chr2	26493489	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr15	75726222	75726312	protein_coding	Eef1d	exon	ENSMUSG00000055762	ProperStrand	99	1	-5.2147
chr15	36538195	36538295	protein_coding	Pabpc1	utr5	ENSMUSG00000022283	ProperStrand	908	chrX	35548304	35548320	protein_coding	Zbtb33	utr3	ENSMUSG00000048047	ProperStrand	3	3	-inf
chr3	96073979	96074059	protein_coding	Hist2h2bb	intron	ENSMUSG00000050936	ProperStrand	57	chr8	59992769	59992859	protein_coding	Hmgb2	exon	ENSMUSG00000054717	ProperStrand	184	1	-11.1686
chr10	85492752	85492786	protein_coding	Fbxo7	intron	ENSMUSG00000001786	ProperStrand	13	chr7	105310561	105310577	protein_coding	Capn5	exon	ENSMUSG00000035547	ProperStrand	99	1	-15.4249
chr8	86452144	86452191	protein_coding	Lphn1	intron	ENSMUSG00000013033	ProperStrand	221	chr15	82980150	82980191	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-4.5915
chr17	87832808	87832838	protein_coding	Calm2	utr3	ENSMUSG00000036438	ProperStrand	59	chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-5.8755
chr2	127416848	127416887	protein_coding	Mrps5	intron	ENSMUSG00000027374	ProperStrand	84	chr18	35716761	35716883	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.6375
chr1	29559116	29559207	LINE	L1_Mus1	L1	chr1L1_Mus129558332	ProperStrand	1	chr3	120166945	120167025	LINE	L1Md_F2	L1	chr3L1Md_F2120166192	ProperStrand	2	1	-inf
chr15	79362111	79362127	protein_coding	Ddx17	exon	ENSMUSG00000055065	ProperStrand	140	chr5	108334207	108334241	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-3.2324
chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	chr14	8714101	8714125	protein_coding	Flnb	exon	ENSMUSG00000025278	ProperStrand	124	1	-8.4201
chr15	36528016	36528750	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr5	113692414	113692431	protein_coding	Sgsm1	exon	ENSMUSG00000042216	ProperStrand	20	4	-20.3402
chr5	100855902	100855943	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr10	127563951	127564031	protein_coding	Baz2a	utr3	ENSMUSG00000040054	ProperStrand	274	1	-3.7104
chr5	142934456	142934536	protein_coding	Foxk1	utr3	ENSMUSG00000056493	ProperStrand	19	chr9	15119676	15119766	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.7702
chr11	106924004	106924049	protein_coding	Bptf	exon	ENSMUSG00000040481	ProperStrand	70	chr2	26494775	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.8325
chr4	126112987	126113007	protein_coding	Eif2c1	utr3	ENSMUSG00000041530	ProperStrand	30	chr7	116664820	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	6	-19.7392
chr3	152450610	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	chr2	158182214	158182292	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-1.1336
mmu-miR-6240	4	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr13	58495481	58495883	protein_coding	Hnrnpk	exon	ENSMUSG00000021546	ProperStrand	117	10	-19.7849
chr3	135268101	135268119	protein_coding	Nfkb1	exon	ENSMUSG00000028163	ProperStrand	55	chr5	123622050	123622066	protein_coding	Hpd	exon	ENSMUSG00000029445	ProperStrand	254	1	-10.5952
chr2	84886581	84886803	protein_coding	Ssrp1	exon	ENSMUSG00000027067	ProperStrand	118	chr9	120039543	120039622	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.1432
chr7	19642922	19642939	protein_coding	Rsph6a	exon	ENSMUSG00000040866	ProperStrand	12	chr1	162967513	162967566	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-6.6191
chr11	70541892	70541992	protein_coding	Kif1c	exon	ENSMUSG00000020821	ProperStrand	26	chr18	35716811	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-12.2836
chr11	102294587	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr14	76247711	76247778	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	3	-2.3578
chr2	156547714	156547730	protein_coding	Dlgap4	utr5	ENSMUSG00000061689	NonProperStrand	12	chr9	120037909	120037973	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-7.9197
chr5	145528963	145529053	protein_coding-noncoding	Trrap	utr5	ENSMUSG00000045482	ProperStrand	1	chr5	136386412	136386485	protein_coding	Ywhag	utr3	ENSMUSG00000051391	ProperStrand	142	1	-inf
chr1	80274564	80274616	protein_coding	Cul3	exon	ENSMUSG00000004364	ProperStrand	15	chr13	54848608	54848624	protein_coding	Gprin1	intron	ENSMUSG00000069227	ProperStrand	55	1	-16.2819
chr9	96972434	96972461	lincRNA	Gm17254	exon	ENSMUSG00000091219	NonProperStrand	6	chr17	24857743	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	6	-inf
chr14	73083559	73109615	protein_coding	Fndc3a	utr5	ENSMUSG00000033487	ProperStrand	84	chr14	33005038	33005079	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-3.3699
chr9	57644111	57644310	protein_coding	Arid3b	exon	ENSMUSG00000004661	ProperStrand	39	chr16	23111375	23111465	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.9006
chr8	41672493	41675821	protein_coding	Mtmr7	exon	ENSMUSG00000039431	ProperStrand	40	chr13	21292133	21292179	tRNA	tRNA65-LeuCAA	.	551381	ProperStrand	57	1	-14.2316
chr5	120133289	120133336	protein_coding	Tbx3	utr3	ENSMUSG00000018604	ProperStrand	87	chr17	43202524	43202541	protein_coding	Tnfrsf21	intron	ENSMUSG00000023915	ProperStrand	36	1	-13.5960
chr9	15119650	15119730	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	chr1	129228429	129228519	snoRNA	ENSMUSG00000093146_AC131793.1	.	ENSMUSG00000093146	ProperStrand	119	13	-20.0380
chr10	126954467	126954551	protein_coding	Shmt2	utr3	ENSMUSG00000025403	ProperStrand	94	chrX	34622906	34623021	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	6	-13.9114
chr10	48646756	48646774	LTR	RMER6-int	ERVK	chr10RMER6-int48646681	ProperStrand	1	chr8	98079659	98079759	protein_coding	Ccdc113	intron	ENSMUSG00000036598	ProperStrand	1	1	-inf
chr16	30514154	30514171	protein_coding	Tmem44	utr3	ENSMUSG00000022537	ProperStrand	217	chr8	129468753	129468799	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-2.1100
chr5	23830822	23830839	protein_coding	Kcnh2	exon	ENSMUSG00000038319	ProperStrand	242	chr8	92871932	92871948	protein_coding	Tox3	utr5	ENSMUSG00000043668	ProperStrand	7	1	-14.9546
chr4	43932888	43932904	protein_coding	Reck	intron	ENSMUSG00000028476	ProperStrand	6	chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-11.1899
chr15	82980074	82980192	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr14	33005038	33005232	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	6	-1.7365
chr12	110782314	110782330	lincRNA	Meg3	exon	ENSMUSG00000021268	ProperStrand	61	chr5	130300521	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.4812
chr11	106113811	106113983	protein_coding	Ftsj3	exon	ENSMUSG00000020706	ProperStrand	64	chr7	118219574	118219620	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	7	-23.8497
chr16	73043251	73043313	protein_coding	Robo1	exon	ENSMUSG00000022883	ProperStrand	47	chr9	55030941	55030972	protein_coding	Ube2q2	exon	ENSMUSG00000032307	ProperStrand	17	1	-16.4402
chrX	99445995	99446012	protein_coding	Cited1	utr5	ENSMUSG00000051159	ProperStrand	72	chr5	108336363	108336394	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-4.5305
chr5	141000555	141000572	protein_coding	Chst12	exon	ENSMUSG00000036599	NonProperStrand	42	chr8	23656046	23669494	protein_coding	Slc20a2	exon	ENSMUSG00000037656	ProperStrand	63	4	-inf
chrX	34335752	34336867	protein_coding	Slc25a5	exon	ENSMUSG00000016319	ProperStrand	55	chr16	17210492	17210512	protein_coding	Rimbp3	exon	ENSMUSG00000071636	ProperStrand	67	1	-13.2656
chr2	93039481	93039571	protein_coding-noncoding	Trp53i11	utr5	ENSMUSG00000068735	ProperStrand	1	chr2	93039949	93040039	protein_coding	Trp53i11	exon	ENSMUSG00000068735	ProperStrand	46	1	-inf
chr10	126993298	126993322	protein_coding	Lrp1	exon	ENSMUSG00000040249	ProperStrand	151	chr13	49779670	49779760	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-5.2010
chr1	173341933	173341949	protein_coding	Usf1	utr5	ENSMUSG00000026641	NonProperStrand	144	chr5	122026474	122026520	protein_coding	Aldh2	exon	ENSMUSG00000029455	ProperStrand	108	1	-10.3755
chr5	152450099	152450872	protein_coding	Rfc3	exon	ENSMUSG00000033970	ProperStrand	38	chr19	8963085	8963175	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.0700
chr7	53945247	53945264	protein_coding	Saal1	exon	ENSMUSG00000006763	ProperStrand	6	chr11	6428103	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-7.7732
chr11	19964336	19964388	protein_coding	Actr2	utr3	ENSMUSG00000020152	ProperStrand	72	chr1	162966192	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	2	-11.5844
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr1	162967115	162967178	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	1	-4.3794
chr16	11144202	11144292	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr4	131865864	131865954	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	NonProperStrand	39	1	-11.3286
chr17	17666757	17666796	protein_coding	Lnpep	exon	ENSMUSG00000023845	ProperStrand	23	chr10	23505151	23505218	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-4.8598
chr10	90432659	90432681	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	chr17	24665421	24665475	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	2	-4.3513
chrX	72214248	72214264	protein_coding-noncoding	Gab3	utr3	ENSMUSG00000032750	ProperStrand	420	chr14	76245451	76245495	protein_coding	Tpt1	exon	ENSMUSG00000060126	ProperStrand	236	1	-6.6899
chr10	61651415	61651439	protein_coding	Tspan15	exon	ENSMUSG00000037031	ProperStrand	9	chr16	23110917	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.9939
chr1	89597841	89598016	protein_coding	Inpp5d	exon	ENSMUSG00000026288	ProperStrand	75	chr9	15119721	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.2505
chr4	148494710	148494727	protein_coding	Dffa	utr3	ENSMUSG00000028974	NonProperStrand	23	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-12.7065
chr8	11008393	11008409	lincRNA	9530052E02Rik	intron	ENSMUSG00000085270	ProperStrand	2	chr11	106516161	106516267	protein_coding	Pecam1	utr3	ENSMUSG00000020717	ProperStrand	56	1	-20.0935
chr16	84862251	84862271	protein_coding	Gabpa	utr3	ENSMUSG00000008976	ProperStrand	38	chr3	108357255	108357351	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-5.4259
chr7	52684102	52684838	protein_coding	Ruvbl2	exon	ENSMUSG00000003868	ProperStrand	41	chr4	131865906	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-4.2466
chr10	43231542	43231623	protein_coding	Bend3	exon	ENSMUSG00000038214	ProperStrand	27	chr10	23505157	23505247	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-4.4110
chr2	51790412	51790428	protein_coding	Rbm43	utr5	ENSMUSG00000036249	ProperStrand	1	chr11	106362304	106362337	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-inf
chr17	31210000	31210045	protein_coding	Abcg1	intron	ENSMUSG00000024030	ProperStrand	36	chr2	26493369	26493469	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-4.7133
chr18	9996131	9996219	protein_coding	Usp14	exon	ENSMUSG00000047879	ProperStrand	13	chr4	131865860	131865950	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	5	-19.7444
chr5	150099079	150099096	protein_coding	Alox5ap	intron	ENSMUSG00000060063	ProperStrand	1	chr10	23506278	23506348	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-inf
chr7	30231500	30231590	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	chr1	36160764	36160849	protein_coding	Hs6st1	exon	ENSMUSG00000045216	ProperStrand	63	6	-23.0778
chr15	101834236	101834253	protein_coding	Krt8	intron	ENSMUSG00000049382	NonProperStrand	6	chr17	35089236	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-10.1991
chr5	143549835	143549877	protein_coding	Tnrc18	exon	ENSMUSG00000039477	ProperStrand	39	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-7.7565
chr11	115111360	115111377	protein_coding	Grin2c	exon	ENSMUSG00000020734	NonProperStrand	4	chr13	24054678	24054694	protein_coding	Scgn	exon	ENSMUSG00000021337	ProperStrand	16	1	-21.9369
chr2	153049526	153049542	protein_coding	Tspyl3	utr3	ENSMUSG00000074671	ProperStrand	228	chr19	8799847	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-2.4922
chr5	23762004	23762084	LTR	ORR1A1	MaLR	chr5ORR1A123761740	NonProperStrand	1	chr5	23762174	23762264	LTR	RLTR13D3	ERVK	chr5RLTR13D323762086	ProperStrand	1	1	-inf
chr18	61873839	61873856	protein_coding	Grpel2	utr3	ENSMUSG00000024580	ProperStrand	27	chr4	131865856	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-8.0155
chr12	41464082	41464099	protein_coding	Dock4	exon	ENSMUSG00000035954	ProperStrand	41	chr2	144087324	144087440	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-7.3034
chr1	16093263	16093363	protein_coding	Rpl7	exon	ENSMUSG00000043716	NonProperStrand	1	chr17	24857799	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	NonProperStrand	27	1	-inf
chr6	16303215	16303295	LINE	Lx5	L1	chr6Lx516303207	ProperStrand	1	chr6	16302874	16302964	LTR	RLTR45	ERVK	chr6RLTR4516302749	NonProperStrand	1	1	-inf
chr7	134634019	134634099	protein_coding	Fbrs	utr3	ENSMUSG00000042423	ProperStrand	7	chr1	162967505	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-12.6263
chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	chr11	72115833	72115878	protein_coding	Xaf1	intron	ENSMUSG00000040483	ProperStrand	2	1	-17.7477
chr2	168426892	168426911	protein_coding	Nfatc2	intron	ENSMUSG00000027544	NonProperStrand	49	chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	2	-11.0564
chr4	131908366	131908458	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr1	155287328	155287354	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	1	-3.1078
chr15	95050371	95050387	protein_coding	Nell2	utr3	ENSMUSG00000022454	ProperStrand	64	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-3.4733
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr19	8799837	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	2	-2.2685
chr8	87517517	87517942	protein_coding	Hook2	exon	ENSMUSG00000052566	ProperStrand	204	chr3	108357256	108357346	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-2.3214
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr8	85961925	85961941	protein_coding	Scoc	utr5	ENSMUSG00000063253	ProperStrand	23	1	-12.3692
chr6	119054932	119054950	protein_coding	Cacna1c	intron	ENSMUSG00000051331	ProperStrand	46	chr16	23111374	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	5	-8.8053
chr1	155067342	155067384	protein_coding	Lamc1	utr3	ENSMUSG00000026478	ProperStrand	239	chr7	116663664	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-1.2362
chr11	42440243	42440259	protein_coding	Gabrb2	exon	ENSMUSG00000007653	ProperStrand	248	chr16	20692865	20692892	protein_coding	Eif4g1	utr3	ENSMUSG00000045983	ProperStrand	199	1	-8.0702
chr8	64017614	64028377	protein_coding	Palld	exon	ENSMUSG00000058056	NonProperStrand	125	chr6	124665299	124665390	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	1	-5.4896
chr15	101926845	101926935	protein_coding	Eif4b	utr3	ENSMUSG00000058655	ProperStrand	484	chr3	108357272	108357352	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-1.0352
chr5	37359035	37359051	protein_coding	Wfs1	exon	ENSMUSG00000039474	NonProperStrand	4	chr16	23111372	23111446	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-10.7545
chr6	88053407	88053442	protein_coding	Rpn1	exon	ENSMUSG00000030062	ProperStrand	58	chr8	111472999	111473074	protein_coding	Zfhx3	exon	ENSMUSG00000038872	ProperStrand	65	3	-20.9331
chr7	109149271	109149287	protein_coding	Numa1	exon	ENSMUSG00000066306	NonProperStrand	171	chr5	108336363	108336408	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-2.9318
chr18	50070353	50070411	protein_coding	Dmxl1	intron	ENSMUSG00000037416	ProperStrand	27	chr4	131908731	131908808	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.4692
chr7	31370515	31370561	protein_coding	Wbp7	exon	ENSMUSG00000006307	ProperStrand	180	chr15	79908957	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-3.3892
chr5	74489267	74489323	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr11	120573055	120573155	protein_coding	Stra13	exon	ENSMUSG00000025144	ProperStrand	1	1	-inf
chr2	29841770	29841809	protein_coding	Spna2	exon	ENSMUSG00000057738	ProperStrand	222	chr4	131866155	131866245	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	4	-6.0225
chr7	52331749	52331765	protein_coding	Nosip	exon	ENSMUSG00000003421	ProperStrand	27	chrX	34622932	34623022	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	4	-14.9086
chr2	90235302	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	42636786	42636804	protein_coding	Fam115a	exon	ENSMUSG00000036667	NonProperStrand	7	1	-8.8025
chr1	46892022	46892052	protein_coding	Slc39a10	exon	ENSMUSG00000025986	ProperStrand	95	chr16	23110829	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-1.0457
chr1	54534103	54534193	SINE	B4A	B4	chr1B4A54533964	NonProperStrand	1	chr12	117581890	117581970	protein_coding	Esyt2	intron	ENSMUSG00000021171	ProperStrand	19	1	-inf
chr4	75094306	75094322	LINE	Lx9	L1	chr4Lx975094037	ProperStrand	41	chr8	73419731	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.8312
chr6	118361610	118361998	protein_coding	Bms1	exon	ENSMUSG00000030138	ProperStrand	107	chr1	33833454	33833472	protein_coding	Zfp451	exon	ENSMUSG00000042197	NonProperStrand	393	2	-13.3499
chr1	163764410	163764500	protein_coding	AI848100	exon	ENSMUSG00000040297	ProperStrand	12	chr19	8798484	8798554	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	3	-18.4702
chr4	140723745	140723761	protein_coding	Fbxo42	exon	ENSMUSG00000028920	ProperStrand	91	chr11	48616642	48616706	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	1	-8.5121
chr2	26768368	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	chr17	35087892	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	7	-1.7972
chr9	78326354	78328411	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr4	122968596	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	6	-5.1774
chr6	86475484	86475542	protein_coding	Pcbp1	exon	ENSMUSG00000051695	ProperStrand	108	chr11	77996557	77996577	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-4.9456
chr10	69605374	69605422	protein_coding	Ccdc6	exon	ENSMUSG00000048701	ProperStrand	72	chr4	46508134	46508157	snoRNA	ENSMUSG00000064410_SNORA36	.	ENSMUSG00000064410	ProperStrand	133	1	-11.3485
chr8	86453753	86453791	protein_coding	Lphn1	exon	ENSMUSG00000013033	ProperStrand	221	chr5	108336364	108336455	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-2.4869
chr9	120038552	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	chr6	131330285	131330424	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	ProperStrand	408	3	-1.5376
chr7	29137543	29137604	protein_coding	Rps16	exon	ENSMUSG00000037563	ProperStrand	191	chr7	150717301	150717348	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	2	-5.6576
chr2	112343463	112343562	protein_coding	Aven	intron	ENSMUSG00000003604	ProperStrand	3	chr18	75161564	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-13.5552
chr11	49649139	49649193	protein_coding	Gfpt2	exon	ENSMUSG00000020363	ProperStrand	11	chr9	39358287	39358304	protein_coding	Olfr958	exon	ENSMUSG00000050853	NonProperStrand	266	1	-13.7934
chr17	34747537	34747555	protein_coding	Agpat1	exon	ENSMUSG00000034254	NonProperStrand	39	chr17	46915096	46915158	protein_coding	Rpl7l1	exon	ENSMUSG00000063888	ProperStrand	37	2	-19.4147
chr3	89138221	89138237	protein_coding	Efna4	exon	ENSMUSG00000028040	NonProperStrand	7	chr8	15027539	15027586	protein_coding	Kbtbd11	exon	ENSMUSG00000055675	ProperStrand	10	1	-19.7613
chr6	128446714	128446739	protein_coding	Pzp	exon	ENSMUSG00000030359	NonProperStrand	4	chr5	138177326	138177424	protein_coding	6430598A04Rik	exon	ENSMUSG00000045348	ProperStrand	7	1	-inf
chr11	96164644	96164665	antisense	0610040B09Rik	.	ENSMUSG00000085645	ProperStrand	3	chr4	136158406	136158500	protein_coding	Kdm1a	exon	ENSMUSG00000036940	ProperStrand	83	1	-18.9376
chr6	90499238	90499256	protein_coding	Aldh1l1	intron	ENSMUSG00000030088	NonProperStrand	4	chr16	23110936	23110960	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.6489
chr2	157901006	157901097	protein_coding	Rprd1b	utr3	ENSMUSG00000027651	ProperStrand	33	chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	1	-9.9673
chr10	80554168	80554620	protein_coding	Creb3l3	exon	ENSMUSG00000035041	ProperStrand	8	chr16	23110892	23110991	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-12.0409
chr10	12900707	12900797	protein_coding	Ltv1	exon	ENSMUSG00000019814	ProperStrand	76	chr3	68889029	68889109	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	2	-4.9273
chrX	149565379	149565469	protein_coding	Foxr2	exon	ENSMUSG00000071665	ProperStrand	1	chr5	130300460	130300540	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-inf
chr2	130101178	130101258	protein_coding	Nop56	intron	ENSMUSG00000027405	ProperStrand	125	chr11	6428076	6428166	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.9375
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	NonProperStrand	14	chr1	89673625	89673725	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	NonProperStrand	27	1	-17.8220
chr10	86154483	86154974	protein_coding	Hsp90b1	exon	ENSMUSG00000020048	ProperStrand	396	chr18	42498791	42498807	protein_coding	Rbm27	utr3	ENSMUSG00000024491	ProperStrand	38	5	-20.1440
chr1	176764802	176764818	protein_coding	Grem2	utr3	ENSMUSG00000050069	ProperStrand	24	chr7	148634699	148634730	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-5.7622
chr7	20028669	20030513	protein_coding	Mark4	exon	ENSMUSG00000030397	ProperStrand	18	chr5	130300518	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-11.4402
chr5	125486846	125486862	protein_coding	Fam101a	intron	ENSMUSG00000037962	ProperStrand	9	chr4	131908689	131908795	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.5343
chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	chr17	26360446	26360527	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	1	-7.2056
chr2	181331025	181331077	protein_coding	Samd10	utr3	ENSMUSG00000038605	ProperStrand	2	chr4	131866224	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-10.9862
chr10	40069261	40069278	protein_coding	Cdk19	utr5	ENSMUSG00000038481	ProperStrand	34	chr14	52829519	52829569	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-9.3443
chr2	37403765	37403831	protein_coding	Rabgap1	intron	ENSMUSG00000035437	ProperStrand	20	chr9	15119722	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.6697
chr14	64126374	64126474	protein_coding	Tdh	intron	ENSMUSG00000021953	ProperStrand	67	chr10	80641711	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	1	-7.3283
chr13	51743567	51743660	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	chr1	162968257	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-1.0682
chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chrX	159218739	159218756	protein_coding	Txlng	utr3	ENSMUSG00000038344	ProperStrand	45	1	-7.0257
chr19	6335507	6335587	protein_coding	Men1	exon	ENSMUSG00000024947	ProperStrand	24	chr1	182733046	182733136	protein_coding	H3f3a	utr3	ENSMUSG00000060743	ProperStrand	46	1	-15.7061
chr2	62201147	62201164	antisense	Gm13561	.	ENSMUSG00000087518	ProperStrand	3	chr4	131908366	131908442	lincRNA	Gm17300	exon	ENSMUSG00000091021	ProperStrand	109	1	-18.3851
chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	chr2	26494763	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	3	-0.9477
chr13	63642129	63642562	protein_coding	Ptch1	exon	ENSMUSG00000021466	ProperStrand	50	chr2	29671908	29671948	protein_coding	Slc27a4	utr3	ENSMUSG00000059316	ProperStrand	24	2	-19.4766
chr16	35403923	35403990	protein_coding	Pdia5	intron	ENSMUSG00000022844	ProperStrand	26	chr1	162966004	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-5.2030
chr19	41990361	41991224	protein_coding	Pgam1	exon	ENSMUSG00000011752	ProperStrand	124	chr11	69481335	69481413	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-1.9576
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr17	35089184	35089235	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-1.4686
chr6	70794803	70794820	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chr2	38012954	38012970	protein_coding	Dennd1a	intron	ENSMUSG00000035392	NonProperStrand	128	2	-15.6073
chr5	138608334	138608368	protein_coding	Mcm7	exon	ENSMUSG00000029730	ProperStrand	258	chr19	8799849	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-2.2844
chr6	37249755	37249771	protein_coding	Dgki	exon	ENSMUSG00000038665	ProperStrand	22	chr16	23110456	23110518	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.2978
chr1	166179514	166179568	protein_coding	Slc19a2	exon	ENSMUSG00000040918	ProperStrand	22	chr4	131908231	131908287	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.0772
chr13	53062077	53062157	LTR	ORR1A2	MaLR	chr13ORR1A253061912	ProperStrand	1	chr13	53062306	53062396	SINE	B4A	B4	chr13B4A53062232	NonProperStrand	1	1	-inf
chr5	31117166	31117183	protein_coding	Mapre3	utr5	ENSMUSG00000029166	NonProperStrand	19	chr4	131865855	131865980	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.7782
chr7	5062341	5062360	protein_coding	Rfpl4	exon	ENSMUSG00000035191	NonProperStrand	27	chr16	23110455	23110538	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.9061
chr16	29075227	29075307	LINE	Lx3B	L1	chr16Lx3B29074905	NonProperStrand	1	chr11	25798117	25798207	protein_coding	5730522E02Rik	intron	ENSMUSG00000032985	NonProperStrand	20	1	-inf
chr11	72257616	72264875	protein_coding	Mybbp1a	exon	ENSMUSG00000040463	ProperStrand	279	chr16	23110875	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	16	-2.6558
chr9	15130806	15130902	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	chr1	63225282	63225322	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	1	-4.8031
chr11	103086769	103086785	protein_coding	Map3k14	exon	ENSMUSG00000020941	NonProperStrand	18	chr9	120038491	120038551	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.3272
chr10	126719283	126719300	protein_coding	Mbd6	utr3	ENSMUSG00000025409	ProperStrand	12	chr2	172848292	172848330	protein_coding	Rbm38	exon	ENSMUSG00000027510	ProperStrand	33	1	-17.6133
chr9	78023108	78023162	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr7	13508327	13508409	protein_coding	Rps5	exon	ENSMUSG00000012848	ProperStrand	108	1	-4.7356
chr1	177622594	177622614	protein_coding	Opn3	exon	ENSMUSG00000026525	ProperStrand	31	chr6	128010926	128010944	protein_coding	Tspan9	intron	ENSMUSG00000030352	ProperStrand	67	1	-14.4212
chr4	137189762	137190855	protein_coding	Usp48	exon	ENSMUSG00000043411	ProperStrand	135	chr5	89094836	89094916	protein_coding	Grsf1	exon	ENSMUSG00000044221	ProperStrand	24	1	-13.5422
chr11	86756706	86756724	protein_coding	Ypel2	intron	ENSMUSG00000018427	ProperStrand	5	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-13.7543
chr18	30476627	30479182	protein_coding	Pik3c3	exon	ENSMUSG00000033628	ProperStrand	7	chr6	67231782	67233963	protein_coding	Serbp1	utr3	ENSMUSG00000036371	ProperStrand	261	1	-14.7997
chr11	60005260	60005317	protein_coding	Rai1	utr3	ENSMUSG00000062115	ProperStrand	25	chr2	130103475	130103500	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-9.8284
chr2	43110993	43111010	LINE	Lx6	L1	chr2Lx643110257	ProperStrand	35	chr1	162967490	162967540	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.4897
chr7	95266597	95266613	protein_coding	Grm5	intron	ENSMUSG00000049583	NonProperStrand	145	chr2	89368462	89368478	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	2	-13.6498
chr9	15120929	15120986	snoRNA	ENSMUSG00000065265_SNORA32	.	ENSMUSG00000065265	ProperStrand	101	chr3	95980284	95980374	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	4	-17.5931
chr10	127181540	127181630	protein_coding	Zbtb39	utr3	ENSMUSG00000044617	ProperStrand	9	chr4	131908276	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.8019
chr14	92114457	92114547	LTR	ORR1B1-int	MaLR	chr14ORR1B1-int92113879	ProperStrand	1	chr4	96223398	96223478	LTR	RMER6A	ERVK	chr4RMER6A96223210	ProperStrand	1	1	-inf
chr15	61903368	61903415	lincRNA	Pvt1	intron	ENSMUSG00000072566	ProperStrand	51	chr10	4741155	4741171	protein_coding	Myct1	utr3	ENSMUSG00000046916	ProperStrand	42	1	-14.3643
chr11	48614367	48614428	snoRNA	ENSMUSG00000064500_SNORD95	.	ENSMUSG00000064500	ProperStrand	100	chr10	23505166	23505256	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-3.3767
chr11	3649569	3649587	protein_coding	Osbp2	intron	ENSMUSG00000020435	ProperStrand	60	chr19	8963051	8963178	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	4	-8.4270
chr14	72301755	72301771	SINE	B4	B4	chr14B472301692	NonProperStrand	99	chr11	6428089	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.3181
chr11	77996342	77996366	protein_coding	Rpl23a	exon	ENSMUSG00000058546	ProperStrand	121	chr13	46765144	46765160	protein_coding	C78339	exon	ENSMUSG00000069237	NonProperStrand	104	1	-10.7998
chr8	90782247	90782263	protein_coding	Papd5	utr3	ENSMUSG00000036779	ProperStrand	32	chr3	123210883	123210947	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-8.0531
chr1	174249472	174249488	protein_coding	Igsf8	exon	ENSMUSG00000038034	ProperStrand	25	chr16	20682822	20683524	protein_coding	Eif4g1	exon	ENSMUSG00000045983	ProperStrand	199	1	-12.6801
chr16	91729699	91729723	protein_coding	Itsn1	utr5	ENSMUSG00000022957	ProperStrand	172	chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	1	-7.3870
chr13	55694937	55696090	protein_coding	Tmed9	exon	ENSMUSG00000058569	ProperStrand	35	chr1	89681232	89681332	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-6.5043
chr2	121949510	121949528	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	chr1	89673664	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	4	-4.3128
chr8	111332633	111332650	protein_coding	Zfhx3	intron	ENSMUSG00000038872	ProperStrand	65	chr7	138021400	138025852	protein_coding	Plekha1	exon	ENSMUSG00000040268	ProperStrand	15	1	-15.9769
chr15	37898073	37898089	protein_coding	Ubr5	exon	ENSMUSG00000037487	NonProperStrand	8	chr16	23110454	23110476	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-6.3329
chr6	148870576	148870599	protein_coding	Fam60a	utr3	ENSMUSG00000039985	ProperStrand	68	chr17	24857740	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	3	-5.7180
chr9	57793253	57793269	protein_coding	Sema7a	intron	ENSMUSG00000038264	NonProperStrand	13	chr4	131908688	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.8088
chr8	93650639	93650780	protein_coding	Aktip	exon	ENSMUSG00000031667	ProperStrand	13	chr1	159223379	159223395	protein_coding	Rasal2	intron	ENSMUSG00000070565	NonProperStrand	22	1	-18.4637
chr2	94824439	94824455	LTR	LTR16B	ERVL	chr2LTR16B94824364	ProperStrand	2	chr19	8798484	8798550	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-12.6199
chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	chr1	145626069	145626153	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	2	-7.2646
chr8	112387973	112387989	antisense	Gm17344	.	ENSMUSG00000078143	NonProperStrand	100	chr11	97643008	97643060	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.6468
chr15	57978169	57978250	snoRNA	ENSMUSG00000080461_SNORA11	.	ENSMUSG00000080461	ProperStrand	171	chr3	123210854	123210980	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	17	-19.6552
chr9	15119719	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	chr6	125071778	125071878	snoRNA	ENSMUSG00000088208_SCARNA11	.	ENSMUSG00000088208	ProperStrand	113	1	-1.6016
chr13	54723202	54723218	protein_coding	Faf2	exon	ENSMUSG00000025873	ProperStrand	90	chr4	131865855	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.1805
chr19	24175388	24176461	protein_coding	Tjp2	exon	ENSMUSG00000024812	ProperStrand	63	chr15	82725599	82725636	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	4	-inf
chr6	47738071	47738092	misc_RNA	Y_RNA	.	ENSMUSG00000065701	ProperStrand	129	chr11	69481384	69481474	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-1.8949
chr16	23111722	23111802	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	chr11	6520320	6520410	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	13	-1.4310
chr5	19412923	19412939	protein_coding	Magi2	intron	ENSMUSG00000040003	ProperStrand	49	chr4	131865391	131865465	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	3	-10.5587
chr8	122429887	122429903	SINE	B1_Mur4	Alu	chr8B1_Mur4122429833	NonProperStrand	12	chr14	124353869	124353886	protein_coding	Itgbl1	exon	ENSMUSG00000032925	ProperStrand	159	1	-14.6447
chr9	64143846	64143877	protein_coding	Tipin	intron	ENSMUSG00000032397	ProperStrand	32	chr9	120039571	120039671	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-7.5096
chr4	134077435	134077472	protein_coding	2610002D18Rik	exon	ENSMUSG00000078521	ProperStrand	5	chr4	131908689	131908770	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-19.0004
chr5	24771179	24771252	protein_coding	Galnt11	utr3	ENSMUSG00000038072	ProperStrand	8	chr10	23505152	23505209	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-11.9038
chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	chr9	78328378	78328438	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-2.8102
chr11	97643704	97643720	protein_coding	Rpl23	utr5	ENSMUSG00000071415	ProperStrand	920	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-3.6551
chr1	93003934	93008745	protein_coding	Lrrfip1	exon	ENSMUSG00000026305	ProperStrand	26	chr14	33005139	33005209	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	2	-9.2063
chr8	72706022	72706122	protein_coding	Tmem161a	utr3	ENSMUSG00000002342	ProperStrand	42	chr16	23110530	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.0882
chr9	54241644	54244078	protein_coding	Dmxl2	exon	ENSMUSG00000041268	ProperStrand	18	chr4	131865460	131865516	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-6.3553
chr5	109124122	109132306	protein_coding	Fgfrl1	exon	ENSMUSG00000008090	ProperStrand	111	chr1	71149269	71149354	protein_coding	Bard1	exon	ENSMUSG00000026196	ProperStrand	44	1	-12.7037
chr5	73557047	73557064	protein_coding	Fryl	intron	ENSMUSG00000070733	NonProperStrand	10	chr13	62644575	62644697	snoRNA	ENSMUSG00000075946_SNORA25	.	ENSMUSG00000075946	ProperStrand	11	1	-19.8944
chr11	88706772	88706862	protein_coding	Akap1	exon	ENSMUSG00000018428	ProperStrand	45	chr7	29136545	29136625	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.8631
chr10	43234220	43234236	protein_coding	Bend3	utr3	ENSMUSG00000038214	NonProperStrand	14	chr2	158185603	158185654	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	2	-15.0076
chr12	30777432	30777477	protein_coding	Tpo	exon	ENSMUSG00000020673	ProperStrand	2	chr7	118219574	118219663	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-11.5289
chr9	36551096	36551155	protein_coding	Stt3a	exon	ENSMUSG00000032116	ProperStrand	31	chr1	162968257	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-8.1379
chr4	130327809	130327899	protein_coding	Pum1	exon	ENSMUSG00000028580	NonProperStrand	5	chr9	15119982	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	NonProperStrand	2	1	-inf
chr8	98269959	98270082	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	chr7	52381719	52381799	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	7	-8.1667
chr16	94351060	94351094	protein_coding	Hlcs	utr3	ENSMUSG00000040820	ProperStrand	22	chr1	162965998	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-5.5331
chr9	96207243	96207310	protein_coding	Tfdp2	exon	ENSMUSG00000032411	ProperStrand	95	chr11	69483134	69483185	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-3.1434
chr4	43505793	43505840	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr10	107792223	107792243	protein_coding	Pawr	intron	ENSMUSG00000035873	ProperStrand	39	1	-3.8628
chr5	141108187	141109248	protein_coding	Ttyh3	exon	ENSMUSG00000036565	ProperStrand	22	chr11	106362603	106362635	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-9.4258
chr2	129998665	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr1	39605591	39605633	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-2.4215
chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	chr9	50816824	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	1	-7.7760
chr19	10274235	10274337	protein_coding	Fen1	utr3	ENSMUSG00000024742	ProperStrand	44	chr2	130102052	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	6	-inf
chr2	156138275	156138292	protein_coding	4921517L17Rik	exon	ENSMUSG00000038085	ProperStrand	3	chr4	131908290	131908380	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-12.4687
chr9	120039314	120040597	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	chr7	29136541	29136656	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	5	-2.0392
chrX	34338408	34338508	protein_coding	Slc25a5	exon	ENSMUSG00000016319	ProperStrand	55	chr4	3762227	3762292	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	1	-9.6637
chr5	111214323	111214348	protein_coding	Ulk1	utr3	ENSMUSG00000029512	ProperStrand	92	chr9	120039661	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	3	-6.7197
chr10	75359822	75360194	protein_coding	Smarcb1	exon	ENSMUSG00000000902	ProperStrand	109	chr8	125419309	125419354	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	1	-8.4207
chr1	137271110	137271126	protein_coding	Shisa4	exon	ENSMUSG00000041889	ProperStrand	64	chr3	68889170	68889231	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-3.1401
chr9	58067825	58067885	protein_coding	Pml	exon	ENSMUSG00000036986	ProperStrand	45	chr9	120039533	120039627	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.8509
chr18	75161562	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	chr4	132394350	132394418	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	1	-3.1992
chr4	126712394	126712472	processed_transcript	Gm12940	.	ENSMUSG00000085334	ProperStrand	4	chr8	34733703	34736813	protein_coding	Ubxn8	exon	ENSMUSG00000052906	ProperStrand	4	1	-inf
chr11	5344505	5344521	protein_coding	Znrf3	exon	ENSMUSG00000041961	ProperStrand	63	chr1	89303911	89303937	protein_coding	Gigyf2	exon	ENSMUSG00000048000	ProperStrand	128	1	-11.6943
chr16	91636319	91636386	protein_coding	Gart	exon	ENSMUSG00000022962	ProperStrand	200	chr9	15119727	15119767	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-0.8394
chr3	19824489	19824569	LINE	L1Md_F2	L1	chr3L1Md_F219823000	ProperStrand	1	chr7	54442749	54442839	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-inf
chr11	88525980	88526010	protein_coding	Msi2	intron	ENSMUSG00000069769	ProperStrand	159	chr11	106362336	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	2	-6.6632
chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	chr7	150717298	150717396	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	6	-1.1446
chr7	105284438	105284455	protein_coding	Capn5	exon	ENSMUSG00000035547	ProperStrand	99	chr17	35087944	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-4.2389
chr4	140609543	140609559	protein_coding	Crocc	utr5	ENSMUSG00000040860	ProperStrand	44	chr5	121655016	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	3	-10.4586
chr17	4082173	4082253	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr2	26493391	26493481	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-1.0251
chr1	64079615	64079705	protein_coding	Klf7	utr3	ENSMUSG00000025959	ProperStrand	9	chr16	23111708	23111788	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-9.0498
chr2	90235294	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	135113340	135113365	protein_coding	Fus	exon	ENSMUSG00000030795	ProperStrand	162	1	-2.6439
chr2	29948966	29949017	protein_coding	Zdhhc12	exon	ENSMUSG00000015335	ProperStrand	24	chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	1	-12.1310
chr15	83702667	83702684	protein_coding	Efcab6	exon	ENSMUSG00000022441	NonProperStrand	5	chr1	132742958	132742975	protein_coding	Pigr	exon	ENSMUSG00000026417	NonProperStrand	48	1	-18.4151
chr10	80568768	80568787	protein_coding	Map2k2	utr5	ENSMUSG00000035027	ProperStrand	26	chr2	130101986	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-7.0135
chr7	149562741	149562764	protein_coding	Ctsd	exon	ENSMUSG00000007891	ProperStrand	60	chr11	69483136	69483271	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.4498
chr3	157570356	157571872	protein_coding	Cth	exon	ENSMUSG00000028179	ProperStrand	14	chr12	17552968	17553048	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-7.9980
chr13	97271619	97274473	protein_coding	Polk	exon	ENSMUSG00000021668	ProperStrand	16	chr2	160191558	160191574	protein_coding	Mafb	exon	ENSMUSG00000074622	ProperStrand	31	1	-17.1335
chr18	39517228	39517246	protein_coding	Arhgap26	exon	ENSMUSG00000036452	NonProperStrand	29	chr5	108336363	108336409	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-6.3090
chr1	135600078	135600094	protein_coding	Atp2b4	utr3	ENSMUSG00000026463	NonProperStrand	4	chr4	131865392	131865481	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	2	-15.6581
chr9	120039581	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	chr14	63287577	63287612	snoRNA	ENSMUSG00000089531_SNORA73	.	ENSMUSG00000089531	ProperStrand	123	1	-2.0756
chr15	102552417	102552507	protein_coding	Calcoco1	utr5	ENSMUSG00000023055	ProperStrand	29	chr9	15119329	15119409	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-6.5417
chr15	97638505	97638829	protein_coding	Hdac7	exon	ENSMUSG00000022475	ProperStrand	7	chr16	23110940	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.4785
chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	chr2	92440278	92440296	protein_coding	Chst1	utr5	ENSMUSG00000027221	ProperStrand	17	1	-12.4349
chr8	120158194	120158211	protein_coding	Plcg2	exon	ENSMUSG00000034330	NonProperStrand	7	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-15.1974
chr19	58929372	58929389	protein_coding	Hspa12a	intron	ENSMUSG00000025092	NonProperStrand	17	chr12	85350481	85350499	protein_coding	Acot1	utr5	ENSMUSG00000072949	ProperStrand	72	1	-15.5114
chr10	23505187	23505238	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	chr13	23545342	23545388	tRNA	tRNA952-LeuCAG	.	1060625	ProperStrand	3	1	-6.9610
chr2	25206483	25206499	protein_coding	Man1b1	utr3	ENSMUSG00000036646	ProperStrand	57	chr9	78327477	78327523	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-6.4357
chrX	13269163	13269180	protein_coding	Cask	intron	ENSMUSG00000031012	ProperStrand	41	chr10	39978308	39978363	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-6.2088
chr6	128446714	128446739	protein_coding	Pzp	exon	ENSMUSG00000030359	NonProperStrand	4	chrX	166425653	166426831	protein_coding	Mid1	exon	ENSMUSG00000035299	ProperStrand	209	1	-16.4696
chr7	52165083	52165183	protein_coding	Ap2a1	exon	ENSMUSG00000060279	ProperStrand	193	chr12	112779229	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-2.6250
chr3	144141680	144141697	protein_coding	Hs2st1	intron	ENSMUSG00000040151	NonProperStrand	31	chr4	138986150	138986225	protein_coding	Ubr4	exon	ENSMUSG00000066036	ProperStrand	304	1	-11.3947
chr4	90921515	90921538	protein_coding	Elavl2	intron	ENSMUSG00000008489	ProperStrand	52	chr5	27676304	27676321	protein_coding	Dpp6	intron	ENSMUSG00000061576	ProperStrand	35	1	-14.6999
chr6	112689098	112689322	protein_coding	Srgap3	exon	ENSMUSG00000030257	NonProperStrand	208	chr4	122968584	122968674	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-3.8847
chr1	162962267	162962347	protein_coding	Zbtb37	exon	ENSMUSG00000043467	ProperStrand	15	chr2	166890502	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-10.3658
chr2	129004103	129004121	antisense	AI847159	.	ENSMUSG00000084826	NonProperStrand	63	chr17	24857716	24857851	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-3.9636
chr1	89105750	89105766	protein_coding	Chrng	exon	ENSMUSG00000026253	NonProperStrand	130	chr10	80642148	80642183	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-4.5968
chr11	12287426	12287492	protein_coding	Cobl	intron	ENSMUSG00000020173	ProperStrand	133	chrX	7701929	7701991	protein_coding	Wdr13	utr3	ENSMUSG00000031166	ProperStrand	8	5	-19.4072
chr15	44468341	44468392	protein_coding	Ebag9	exon	ENSMUSG00000022339	ProperStrand	3	chr5	130300531	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-8.5956
chr17	35089182	35089210	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	chr7	88674740	88674813	snoRNA	ENSMUSG00000093107_AC167122.1	.	ENSMUSG00000093107	ProperStrand	110	2	-7.1990
chr9	48013215	48013232	LINE	L1M2	L1	chr9L1M248012984	NonProperStrand	34	chr4	131908385	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.3115
chr6	120720823	120720923	protein_coding	Cecr2	utr3	ENSMUSG00000071226	ProperStrand	39	chr11	101466306	101466351	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	1	-9.7385
chr4	46515770	46515823	protein_coding	Nans	utr3	ENSMUSG00000028334	ProperStrand	18	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-9.3517
chr8	98237088	98237105	protein_coding	Ndrg4	exon	ENSMUSG00000036564	NonProperStrand	6	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-6.1051
chr5	100828392	100828420	protein_coding	Sec31a	exon	ENSMUSG00000035325	ProperStrand	61	chr10	23505152	23505204	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.2108
chr5	138623969	138624348	protein_coding	Taf6	exon	ENSMUSG00000036980	ProperStrand	11	chr17	28036385	28036458	protein_coding	Uhrf1bp1	utr3	ENSMUSG00000039512	ProperStrand	79	3	-21.0685
chr8	109620323	109620351	protein_coding	Terf2	exon	ENSMUSG00000031921	ProperStrand	34	chr10	40908350	40908390	protein_coding	Fig4	exon	ENSMUSG00000038417	ProperStrand	18	1	-16.7811
chr12	104767719	104767809	LTR	ORR1B1	MaLR	chr12ORR1B1104767555	NonProperStrand	1	chr16	9262812	9262892	LTR	ORR1A1	MaLR	chr16ORR1A19262531	NonProperStrand	1	1	-inf
chr9	44143069	44143143	protein_coding	H2afx	exon	ENSMUSG00000049932	ProperStrand	137	chr3	123210854	123210893	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-0.8881
chr16	23110454	23110536	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	NonProperStrand	16	chr10	23505152	23505218	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	NonProperStrand	45	2	-inf
chr13	19219528	19219599	protein_coding	Amph	intron	ENSMUSG00000021314	ProperStrand	35	chr5	108336381	108336471	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-5.9354
chr18	37911790	37911806	protein_coding	Pcdhga9	intron	ENSMUSG00000023036	ProperStrand	245	chr2	130101241	130101290	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-3.8738
chr15	10965488	10965504	protein_coding	Rxfp3	utr3	ENSMUSG00000060735	ProperStrand	37	chr1	162967516	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.3830
chr16	91030798	91034365	protein_coding	Gcfc1	exon	ENSMUSG00000022974	ProperStrand	17	chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	1	-12.6366
chr12	101361539	101361574	protein_coding	Psmc1	utr3	ENSMUSG00000021178	ProperStrand	14	chr10	23505152	23505236	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-9.3303
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr13	90238585	90238659	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	3	-5.5890
chr15	85704133	85704184	protein_coding	Gtse1	exon	ENSMUSG00000022385	ProperStrand	74	chr9	116875139	116875158	protein_coding	Rbms3	intron	ENSMUSG00000039607	NonProperStrand	54	1	-13.1062
chr15	78964090	78964187	protein_coding	Micall1	utr3	ENSMUSG00000033039	ProperStrand	48	chr3	95980364	95980410	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	3	-16.4502
chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr5	149146115	149146200	protein_coding	Slc7a1	exon	ENSMUSG00000041313	ProperStrand	65	2	-10.2045
chr15	76735096	76735269	protein_coding	Rpl8	exon	ENSMUSG00000003970	ProperStrand	191	chr16	18240802	18240892	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	1	-6.8196
chr7	117189863	117189943	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr8	13876097	13876176	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-0.8660
chr3	135523711	135523728	protein_coding	Slc39a8	intron	ENSMUSG00000053897	NonProperStrand	19	chr18	35716684	35716736	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.2504
chr17	46158714	46158757	protein_coding	Vegfa	intron	ENSMUSG00000023951	ProperStrand	43	chr11	86133420	86133457	protein_coding	Med13	exon	ENSMUSG00000034297	ProperStrand	23	1	-15.9376
chr11	12243823	12243913	protein_coding	Cobl	exon	ENSMUSG00000020173	ProperStrand	133	chr4	131866155	131866235	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-2.2577
chr3	146852126	146852144	SINE	B3A	B2	chr3B3A146852041	NonProperStrand	1	chr4	131908810	131908871	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-inf
chr9	56955321	56955394	protein_coding	Sin3a	exon	ENSMUSG00000042557	ProperStrand	108	chr7	20310054	20310070	protein_coding	Pvrl2	exon	ENSMUSG00000062300	ProperStrand	110	1	-10.9152
chr6	6002766	6002817	protein_coding	Slc25a13	exon	ENSMUSG00000015112	ProperStrand	78	chr9	66766385	66766402	protein_coding	Rab8b	intron	ENSMUSG00000036943	NonProperStrand	3	1	-20.0879
chr11	115439847	115439891	protein_coding	Nup85	exon	ENSMUSG00000020739	ProperStrand	33	chr1	162966001	162966040	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-7.8697
chr11	76779418	76780259	protein_coding	Blmh	exon	ENSMUSG00000020840	ProperStrand	70	chr19	8963030	8963120	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.0216
chr18	78220143	78220203	protein_coding	5430411K18Rik	exon	ENSMUSG00000039840	ProperStrand	17	chr4	131908245	131908355	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-12.2081
chr11	98072257	98072347	protein_coding	Cdk12	exon	ENSMUSG00000003119	ProperStrand	50	chr16	23111687	23111767	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.1991
chr3	97817679	97851652	protein_coding	Notch2	exon	ENSMUSG00000027878	ProperStrand	86	chr11	97642952	97643016	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.8796
chr5	91010226	91010243	SINE	MIRc	MIR	chr5MIRc91010147	ProperStrand	3	chrX	84483693	84483728	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-14.6302
chr13	54763043	54763131	protein_coding	Faf2	utr3	ENSMUSG00000025873	ProperStrand	90	chr10	39978279	39978369	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-4.6746
chr14	34776834	34776850	protein_coding	Rbp3	utr3	ENSMUSG00000041534	NonProperStrand	41	chr6	119942361	119942392	protein_coding	Wnk1	exon	ENSMUSG00000045962	ProperStrand	221	1	-11.4670
chr8	72433406	72433464	protein_coding	Gatad2a	utr3	ENSMUSG00000036180	ProperStrand	112	chr4	149616284	149618158	protein_coding	Eno1	exon	ENSMUSG00000063524	ProperStrand	432	1	-8.1117
chr7	133726521	133726538	protein_coding	Cln3	exon	ENSMUSG00000030720	ProperStrand	87	chr12	17552965	17553029	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-4.3753
chr19	5110262	5110380	protein_coding	Klc2	exon	ENSMUSG00000024862	ProperStrand	25	chr11	97642952	97643023	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.0636
chr5	143665858	143666113	protein_coding	Actb	exon	ENSMUSG00000029580	ProperStrand	446	chr7	29136525	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	4	-1.0887
chr11	120818165	120818218	protein_coding	Slc16a3	exon	ENSMUSG00000025161	ProperStrand	98	chr1	107743299	107743317	protein_coding	Tnfrsf11a	utr3	ENSMUSG00000026321	NonProperStrand	100	1	-11.3014
chr11	72204578	72204626	protein_coding	Smtnl2	utr3	ENSMUSG00000045667	ProperStrand	30	chr8	59991434	59991450	protein_coding	Hmgb2	exon	ENSMUSG00000054717	NonProperStrand	96	1	-13.7725
chr13	59883487	59883504	protein_coding	Zcchc6	exon	ENSMUSG00000035248	NonProperStrand	10	chr12	17552949	17552994	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-8.6970
chr10	23505150	23505255	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	chr12	81618868	81618892	snoRNA	ENSMUSG00000093141_AC163282.1	.	ENSMUSG00000093141	ProperStrand	39	8	-17.5135
chr14	52854948	52855105	protein_coding	Chd8	exon	ENSMUSG00000053754	ProperStrand	167	chr7	117166760	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	2	-5.0416
chr11	62326501	62326562	protein_coding	Pigl	utr3	ENSMUSG00000014245	ProperStrand	21	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	10	-inf
chr15	81785130	81785220	protein_coding	Pmm1	intron	ENSMUSG00000022474	ProperStrand	24	chr15	98350176	98350256	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-6.5641
chr11	116106942	116106983	protein_coding	Srp68	utr3	ENSMUSG00000020780	ProperStrand	42	chr16	23111389	23111479	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.7838
chr3	102844859	102844916	protein_coding	Csde1	intron	ENSMUSG00000068823	ProperStrand	122	chr12	17552966	17553056	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-3.7402
chr5	122907352	122907379	protein_coding	Atp2a2	exon	ENSMUSG00000029467	ProperStrand	166	chr9	120038564	120038681	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	4	-5.8007
chr12	106269284	106269384	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	chr4	132394297	132394332	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	2	-1.6041
chrX	138159145	138159161	protein_coding	Irs4	exon	ENSMUSG00000054667	NonProperStrand	98	chr7	52382014	52382040	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-5.7453
chr9	108192906	108195669	protein_coding	Nicn1	exon	ENSMUSG00000032606	ProperStrand	12	chr7	116664819	116664899	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-5.5966
chr3	89903529	89903584	protein_coding	Tpm3	utr3	ENSMUSG00000027940	ProperStrand	55	chr8	106942360	106942376	protein_coding	Dync1li2	utr3	ENSMUSG00000035770	ProperStrand	75	1	-13.0414
chr10	79879959	79880062	protein_coding	Tcf3	exon	ENSMUSG00000020167	NonProperStrand	24	chrX	7484585	7484601	protein_coding	Timm17b	utr3	ENSMUSG00000031158	ProperStrand	36	1	-16.2009
chr3	136394773	136394853	protein_coding	Ppp3ca	intron	ENSMUSG00000028161	ProperStrand	45	chr18	35716831	35716885	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.6579
chr14	61446143	61446169	protein_coding	Mipep	exon	ENSMUSG00000021993	ProperStrand	6	chr16	23111383	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-9.1716
chr13	67046267	67054498	protein_coding	Ptdss1	exon	ENSMUSG00000021518	ProperStrand	10	chr15	82980100	82980190	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-10.7890
chr18	73693113	73693138	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr4	132394328	132394418	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	2	-3.2192
chr13	107697796	107697881	protein_coding	Ipo11	intron	ENSMUSG00000042590	ProperStrand	120	chr17	13112532	13112578	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	3	-8.2355
chr9	58491487	58491512	protein_coding	Nptn	exon	ENSMUSG00000032336	ProperStrand	25	chr19	8799067	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-7.5768
chr3	104604081	104604171	protein_coding	Mov10	intron	ENSMUSG00000002227	ProperStrand	96	chr5	108330950	108331112	protein_coding	Rpl5	exon	ENSMUSG00000058558	ProperStrand	235	1	-9.6324
chr2	26494708	26494829	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	chr8	113362431	113362490	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	8	-6.7266
chr5	140448522	140448539	protein_coding	Elfn1	exon	ENSMUSG00000048988	ProperStrand	12	chr1	162965531	162965569	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-6.4045
chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr1	154965584	154965654	protein_coding	Nmnat2	utr3	ENSMUSG00000042751	ProperStrand	39	1	-7.3115
chr7	20222919	20223014	protein_coding	Clptm1	exon	ENSMUSG00000002981	ProperStrand	109	chr17	34256239	34256270	protein_coding	Brd2	utr5	ENSMUSG00000024335	ProperStrand	69	5	-inf
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr11	6519815	6519944	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	4	-6.1433
chr2	53051472	53051552	protein_coding	Arl6ip6	exon	ENSMUSG00000026960	ProperStrand	8	chr8	73290440	73290530	protein_coding	Ifi30	exon	ENSMUSG00000031838	ProperStrand	40	1	-18.2024
chr19	34455352	34455369	LTR	MTE2b	MaLR	chr19MTE2b34455309	NonProperStrand	10	chr16	23110940	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.7978
chr17	75115073	75115153	Other	RMER1A	Other	chr17RMER1A75115072	NonProperStrand	1	chr17	75114870	75114960	Other	RMER1B	Other	chr17RMER1B75114493	NonProperStrand	1	1	-inf
chr8	26824953	26824970	protein_coding	Whsc1l1	utr3	ENSMUSG00000054823	ProperStrand	36	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-9.1855
chr18	35069894	35073269	protein_coding	Etf1	exon	ENSMUSG00000024360	ProperStrand	74	chr10	23506278	23506336	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	5	-20.9199
chr4	151680191	151680281	protein_coding	Icmt	utr3	ENSMUSG00000039662	ProperStrand	48	chr2	26493394	26493474	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	30	-20.2510
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr10	23506278	23506343	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-2.7823
chr9	20733497	20734582	protein_coding	Dnmt1	exon	ENSMUSG00000004099	ProperStrand	91	chr10	110918612	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-2.7030
chr1	89251695	89251773	protein_coding-noncoding	Gigyf2	utr5	ENSMUSG00000048000	ProperStrand	1	chr19	8799832	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-inf
chr11	69711883	69712372	protein_coding	2810408A11Rik	exon	ENSMUSG00000018570	ProperStrand	3	chr9	15119722	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-8.7352
chr17	80461056	80461072	protein_coding	Hnrpll	exon	ENSMUSG00000024095	ProperStrand	27	chr16	23110827	23110851	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.1875
chrX	21395976	21395993	LINE	Lx9	L1	chrXLx921395732	ProperStrand	2	chr6	48229753	48229804	lincRNA	Gm16630	intron	ENSMUSG00000086383	ProperStrand	6	2	-inf
chr3	89804898	89806272	protein_coding	Ubap2l	exon	ENSMUSG00000042520	ProperStrand	88	chr4	131865856	131865946	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.2107
chr5	13364492	13364513	protein_coding	Sema3a	intron	ENSMUSG00000028883	NonProperStrand	10	chr3	123210854	123210975	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.4047
chr11	99071587	99074445	protein_coding	Smarce1	exon	ENSMUSG00000037935	ProperStrand	38	chr5	45889741	45889818	protein_coding	Lap3	exon	ENSMUSG00000039682	ProperStrand	87	1	-13.4909
chr3	34871764	34871781	LINE	L1_Mus3	L1	chr3L1_Mus334871692	ProperStrand	1	chr16	57391605	57391693	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	1	-inf
chr11	78081886	78081909	protein_coding	2610507B11Rik	exon	ENSMUSG00000010277	ProperStrand	246	chr5	74489543	74489665	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	3	-4.1363
chr13	98224674	98224774	lincRNA	Gm11019	intron	ENSMUSG00000078952	ProperStrand	113	chrX	34622906	34622962	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	NonProperStrand	26	1	-13.7389
chr12	8504608	8504691	protein_coding	Rhob	utr3	ENSMUSG00000054364	ProperStrand	10	chr9	15119733	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-9.9946
chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	chr6	4940091	4940107	protein_coding	Ppp1r9a	intron	ENSMUSG00000032827	ProperStrand	50	1	-10.1241
chr2	179960492	179960509	protein_coding	Lama5	utr5	ENSMUSG00000015647	ProperStrand	365	chr5	125513804	125513860	protein_coding	Ncor2	exon	ENSMUSG00000029478	ProperStrand	377	1	-6.0456
chr9	65049532	65049562	snRNA	ENSMUSG00000075930_U5	.	ENSMUSG00000075930	ProperStrand	175	chr7	29136531	29136631	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-0.8141
chr19	16291274	16291291	protein_coding	Gnaq	intron	ENSMUSG00000024639	NonProperStrand	10	chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	1	-13.1528
chr8	108233711	108233730	protein_coding	4933405L10Rik	exon	ENSMUSG00000013158	ProperStrand	94	chr13	23528224	23528284	tRNA	tRNA103-LysCTT	.	971533	ProperStrand	180	1	-10.2074
chr3	157204709	157204799	protein_coding	Zranb2	exon	ENSMUSG00000028180	ProperStrand	43	chr5	87246104	87246184	protein_coding	Ythdc1	exon	ENSMUSG00000035851	ProperStrand	45	1	-14.5742
chr1	135147552	135147568	protein_coding	Plekha6	intron	ENSMUSG00000041757	NonProperStrand	40	chr2	26768050	26768102	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	1	-9.2082
chr1	88248808	88248833	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chr2	24825186	24827046	protein_coding	Wdr85	exon	ENSMUSG00000026975	ProperStrand	323	1	-4.0822
chr5	148113281	148113297	protein_coding	Cdx2	utr3	ENSMUSG00000029646	ProperStrand	276	chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	1	-7.5704
chr4	151235743	151235819	protein_coding	Camta1	utr5	ENSMUSG00000014592	ProperStrand	170	chr2	79843543	79843559	protein_coding	Pde1a	intron	ENSMUSG00000059173	NonProperStrand	275	2	-13.0284
chr4	128670515	128670558	protein_coding	Ak2	utr5	ENSMUSG00000028792	ProperStrand	43	chr10	23505189	23505279	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-4.9273
chr11	90247901	90247919	protein_coding	Hlf	intron	ENSMUSG00000003949	NonProperStrand	25	chr3	108357358	108357458	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	2	-10.1815
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr3	67161283	67161299	protein_coding	Rsrc1	utr3	ENSMUSG00000034544	NonProperStrand	71	1	-8.3788
chr1	88247416	88247496	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chr14	65365867	65365957	protein_coding	Kif13b	exon	ENSMUSG00000060012	ProperStrand	37	1	-8.3253
chr9	64025564	64025726	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	chr17	39985590	39985659	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-1.7271
chr11	98690571	98690661	protein_coding	Casc3	exon	ENSMUSG00000078676	ProperStrand	33	chr2	158182201	158182281	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-6.1759
chr2	165972754	165972773	protein_coding	Sulf2	intron	ENSMUSG00000006800	ProperStrand	171	chr2	26493366	26493499	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	3	-5.3090
chr6	70794802	70794820	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chr8	85689747	85689763	protein_coding	Tbc1d9	utr5	ENSMUSG00000031709	ProperStrand	66	1	-11.2297
chr11	19964437	19964456	protein_coding	Actr2	utr3	ENSMUSG00000020152	ProperStrand	72	chr11	6428104	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.8663
chr3	82816757	82816774	protein_coding	Fgg	exon	ENSMUSG00000033860	NonProperStrand	321	chr7	134671419	134671519	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	14	-19.0841
chr18	42734259	42734338	protein_coding	Tcerg1	exon	ENSMUSG00000024498	ProperStrand	210	chr19	5286849	5286923	protein_coding	Sf3b2	exon	ENSMUSG00000024853	ProperStrand	102	1	-9.7356
chr8	40681587	40681603	protein_coding	Msr1	intron	ENSMUSG00000025044	ProperStrand	138	chr7	117189864	117189916	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-4.5900
chr7	135755206	135755226	protein_coding	Inpp5f	intron	ENSMUSG00000042105	ProperStrand	5	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-10.3095
chr5	30387199	30387289	protein_coding	Tyms	utr3	ENSMUSG00000025747	ProperStrand	8	chr17	35521397	35521477	protein_coding	H2-Q4	utr3	ENSMUSG00000035929	NonProperStrand	10	1	-19.4909
chr18	63908259	63908293	protein_coding	Wdr7	intron	ENSMUSG00000040560	ProperStrand	28	chr4	56910499	56910589	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	6	-20.2835
chr7	119224242	119224309	protein_coding	Usp47	intron	ENSMUSG00000059263	ProperStrand	40	chr11	97642952	97642992	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.1871
chr15	90060412	90060448	protein_coding	Alg10b	utr3	ENSMUSG00000075470	ProperStrand	15	chr11	97642952	97642999	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-12.1414
chr19	31157628	31157644	protein_coding	Cstf2t	exon	ENSMUSG00000053536	ProperStrand	48	chr4	131908696	131908752	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.5413
chr3	31017409	31017499	protein_coding	Skil	exon	ENSMUSG00000027660	ProperStrand	23	chr7	117166742	117166822	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-6.7066
chr10	25192936	25198869	protein_coding	Epb4.1l2	utr5	ENSMUSG00000019978	ProperStrand	105	chr7	116663702	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.6087
chr14	31933066	31933086	protein_coding	Pbrm1	utr3	ENSMUSG00000042323	ProperStrand	87	chr15	34370545	34370621	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-2.8777
chr11	62271951	62272041	protein_coding	Pigl	exon	ENSMUSG00000014245	ProperStrand	21	chr19	8798484	8798550	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	5	-19.0918
chr9	107157987	107158077	protein_coding	Mapkapk3	utr3	ENSMUSG00000032577	ProperStrand	16	chr6	71832629	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-8.2591
chr9	65044377	65044467	snRNA	ENSMUSG00000075763_U5	.	ENSMUSG00000075763	ProperStrand	216	chr10	23505152	23505279	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	17	-16.1699
chr5	115939497	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr7	29136526	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	12	-2.8794
chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	chr14	76247711	76247773	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-0.8333
chr11	6166621	6166839	protein_coding	Ddx56	exon	ENSMUSG00000004393	ProperStrand	21	chr3	123210903	123210983	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.9390
chr7	125985930	125985955	protein_coding	2310008H09Rik	utr3	ENSMUSG00000030980	ProperStrand	42	chrX	130496426	130496668	protein_coding	Sytl4	exon	ENSMUSG00000031255	ProperStrand	169	1	-11.9551
chr5	66198508	66198538	protein_coding	N4bp2	exon	ENSMUSG00000037795	ProperStrand	30	chr18	33954895	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-8.0004
chr10	126994578	126994595	protein_coding	Lrp1	exon	ENSMUSG00000040249	NonProperStrand	24	chr3	68889026	68889126	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-4.9936
chr1	10107617	10107645	protein_coding	Cspp1	intron	ENSMUSG00000056763	ProperStrand	37	chr15	34370545	34370603	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-4.4605
chr10	62421933	62422023	protein_coding	Dna2	exon	ENSMUSG00000036875	ProperStrand	35	chr4	131908264	131908344	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.2627
chr7	117166722	117166862	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	10	-1.7436
chr12	31950415	31951594	protein_coding	Lamb1	utr5	ENSMUSG00000002900	ProperStrand	87	chr3	88497849	88497929	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-6.7220
chr11	90666845	90666935	lincRNA	4930405D11Rik	intron	ENSMUSG00000085940	NonProperStrand	2	chr11	98830516	98830606	protein_coding	Rara	intron	ENSMUSG00000037992	ProperStrand	37	1	-inf
chr19	59374390	59375446	protein_coding	Pdzd8	exon	ENSMUSG00000074746	ProperStrand	42	chr18	35716761	35716851	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	6	-15.6771
chr12	60099249	60102829	protein_coding	Sec23a	exon	ENSMUSG00000020986	ProperStrand	16	chr4	131865940	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.1079
chr1	33823466	33823566	protein_coding	Zfp451	intron	ENSMUSG00000042197	ProperStrand	17	chr4	131908809	131908876	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.3002
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr2	91436228	91436335	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-1.6697
chr11	107410670	107436283	protein_coding	Helz	utr5	ENSMUSG00000020721	ProperStrand	60	chr9	120039570	120039660	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.3187
chr9	53345712	53345771	protein_coding	Npat	intron	ENSMUSG00000033054	ProperStrand	20	chr2	145076804	145209255	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	2	-15.7486
chr13	54187770	54188391	protein_coding	Sfxn1	exon	ENSMUSG00000021474	ProperStrand	18	chr4	131908234	131908289	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.4481
chr5	149126887	149126905	protein_coding	Mtus2	utr3	ENSMUSG00000029651	ProperStrand	114	chr17	13115656	13115786	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	1	-6.2617
chr2	115825920	115825936	protein_coding	Meis2	exon	ENSMUSG00000027210	NonProperStrand	8	chr16	23110944	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.2180
chr13	34294771	34294830	protein_coding	Slc22a23	intron	ENSMUSG00000038267	ProperStrand	95	chr1	89673618	89673708	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-2.4539
chr9	7102322	7102402	protein_coding	Dync2h1	exon	ENSMUSG00000047193	ProperStrand	40	chr19	8799582	8799624	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	4	-inf
chr6	70794803	70794820	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chr12	106269283	106269425	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-2.4390
chr4	43505765	43505847	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr10	127564478	127564568	protein_coding	Baz2a	utr3	ENSMUSG00000040054	ProperStrand	274	1	-0.7676
chr15	99078954	99078986	protein_coding	Mcrs1	exon	ENSMUSG00000037570	ProperStrand	46	chr4	131866174	131866279	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	3	-10.1081
chr11	98878344	98878468	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	chr2	144087323	144087463	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	3	-2.1172
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr11	62590590	62590630	snoRNA	ENSMUSG00000064692_SNORA67	.	ENSMUSG00000064692	ProperStrand	185	1	-6.6861
chr10	48712060	48712077	LTR	IAPLTR2b	ERVK	chr10IAPLTR2b48711762	NonProperStrand	1	chrX	71517821	71517885	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-inf
chr11	3029863	3030194	pseudogene	Pisd-ps1	.	ENSMUSG00000082286	ProperStrand	14	chr11	68886928	68887008	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-7.0150
chr5	118713299	118713354	protein_coding	2410131K14Rik	utr3	ENSMUSG00000032840	ProperStrand	6	chrX	34622906	34622988	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-7.7498
chr10	69652761	69652861	protein_coding	Ccdc6	utr3	ENSMUSG00000048701	ProperStrand	72	chr6	71832615	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-5.2553
chr10	79517781	79517864	protein_coding	Gpx4	exon	ENSMUSG00000075706	ProperStrand	55	chr2	26494710	26494800	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.2644
chr9	78327808	78329477	protein_coding	Eef1a1	utr5	ENSMUSG00000037742	ProperStrand	1990	chr6	115757992	115758119	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	9	-6.4440
chr9	30959435	30959572	protein_coding	Aplp2	exon	ENSMUSG00000031996	ProperStrand	172	chr4	130160601	130160617	protein_coding	Nkain1	exon	ENSMUSG00000078532	NonProperStrand	10	1	-14.8628
chr3	45185575	45185591	protein_coding	Pcdh10	exon	ENSMUSG00000049100	ProperStrand	2	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-10.5602
chr16	23110987	23111010	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr13	21284212	21284315	protein_coding	Trim27	exon	ENSMUSG00000021326	ProperStrand	28	1	-10.5519
chr10	23505152	23505270	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	chr11	97631139	97631157	tRNA	tRNA1444-CysGCA	.	651115	ProperStrand	91	2	-1.5011
chr9	29621528	29621546	protein_coding	Ntm	intron	ENSMUSG00000059974	NonProperStrand	27	chr5	108336363	108336411	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-6.4517
chr7	87236584	87236623	protein_coding	Zfp710	utr3	ENSMUSG00000048897	ProperStrand	229	chr9	120038622	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-0.9560
chr16	4154936	4155016	protein_coding	Crebbp	exon	ENSMUSG00000022521	ProperStrand	56	chr4	140071031	140071121	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	ProperStrand	15	1	-16.2689
chr11	57874057	57874147	protein_coding	Larp1	utr3	ENSMUSG00000037331	ProperStrand	201	chr5	130300460	130300540	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-2.5820
chr2	133806896	133806916	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr17	24869755	24869771	protein_coding	Rpl3l	utr5	ENSMUSG00000002500	NonProperStrand	56	1	-13.2935
chr1	164621288	164622507	protein_coding	Prrc2c	exon	ENSMUSG00000040225	ProperStrand	413	chr8	13876138	13876228	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-3.4282
chr6	38384214	38384230	protein_coding	Ubn2	exon	ENSMUSG00000038538	ProperStrand	86	chr2	26494708	26494760	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.4757
chr1	39602074	39602090	protein_coding	D1Bwg0212e	exon	ENSMUSG00000003135	NonProperStrand	1	chr4	131908356	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-inf
chr11	115740902	115740918	protein_coding	Myo15b	exon	ENSMUSG00000034427	NonProperStrand	9	chr5	108334260	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	4	-19.3923
chr10	81007482	81007501	protein_coding	Gna11	intron	ENSMUSG00000034781	ProperStrand	23	chr16	11144072	11144214	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	1	-12.4018
chr8	85276549	85276566	LTR	IAP-d-int	ERVK	chr8IAP-d-int85276155	ProperStrand	26	chr7	29136525	29136581	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.8707
chr2	90235286	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chrX	7473528	7475682	protein_coding	Pqbp1	exon	ENSMUSG00000031157	ProperStrand	22	1	-6.4314
chr7	120657374	120657390	protein_coding	Far1	utr5	ENSMUSG00000030759	ProperStrand	72	chr16	23110521	23110575	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.1562
chr11	117675180	117675202	protein_coding	Syngr2	utr3	ENSMUSG00000048277	ProperStrand	15	chr18	35716764	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-7.8913
chr2	119767435	119767460	protein_coding	Mga	exon	ENSMUSG00000033943	ProperStrand	180	chr9	120038576	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-2.4255
chr19	24169047	24169137	protein_coding	Tjp2	utr3	ENSMUSG00000024812	ProperStrand	63	chr7	116663649	116663729	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.4284
chr7	26082578	26082678	protein_coding	Pafah1b3	utr5	ENSMUSG00000005447	ProperStrand	4	chr7	13516168	13516198	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	1	-14.3430
chr2	26768379	26768433	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	chr8	32260366	32260422	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	7	-0.8662
chr19	42093722	42093739	protein_coding	Ubtd1	intron	ENSMUSG00000025171	NonProperStrand	9	chr9	108650214	108650237	protein_coding	Prkar2a	utr3	ENSMUSG00000032601	ProperStrand	43	1	-17.8687
chr14	51427119	51427219	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr2	147009105	147009122	protein_coding	Nkx2-2	utr3	ENSMUSG00000027434	NonProperStrand	84	1	-6.5419
chr1	65226099	65226116	protein_coding	Idh1	intron	ENSMUSG00000025950	NonProperStrand	9	chr1	153636006	153636031	protein_coding	Edem3	intron	ENSMUSG00000043019	ProperStrand	84	1	-16.5766
chr3	87673958	87674013	protein_coding	Prcc	exon	ENSMUSG00000004895	ProperStrand	38	chr1	93743979	93743995	protein_coding	Twist2	utr3	ENSMUSG00000007805	ProperStrand	21	1	-16.3728
chr12	4727178	4727194	protein_coding	4930417G10Rik	intron	ENSMUSG00000079177	NonProperStrand	2	chr11	69481333	69481384	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-10.4764
chr2	26295100	26295190	protein_coding	Sec16a	exon	ENSMUSG00000026924	NonProperStrand	5	chrX	12712071	12712151	protein_coding	Usp9x	exon	ENSMUSG00000031010	NonProperStrand	8	1	-18.7911
chr19	29040497	29040524	protein_coding	Ppapdc2	utr3	ENSMUSG00000040105	ProperStrand	14	chr4	131866155	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	7	-inf
chr1	141999429	141999445	protein_coding	Cfh	exon	ENSMUSG00000026365	NonProperStrand	1	chr4	116827019	116827276	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	1	-inf
chr8	87366709	87368337	protein_coding	Calr	exon	ENSMUSG00000003814	ProperStrand	232	chrX	34622906	34622970	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	8	-12.0156
chrX	70919268	70919313	protein_coding	Slc6a8	exon	ENSMUSG00000019558	ProperStrand	47	chr4	94632027	94632127	protein_coding	Mysm1	exon	ENSMUSG00000062627	ProperStrand	20	11	-inf
chr7	31363996	31364595	protein_coding	Wbp7	exon	ENSMUSG00000006307	ProperStrand	180	chr17	12585979	12585995	protein_coding	Plg	exon	ENSMUSG00000059481	ProperStrand	86	3	-inf
chr5	130295415	130295505	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	chr6	38483975	38484003	tRNA	tRNA107-ArgCCT	.	69270	ProperStrand	63	8	-20.6605
chr2	155841337	155841438	protein_coding	Ergic3	intron	ENSMUSG00000005881	ProperStrand	15	chr4	131908689	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.5353
chr4	133698694	133698783	protein_coding	Ccdc21	intron	ENSMUSG00000037443	ProperStrand	112	chr1	162966001	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-2.4903
chr8	86184943	86185033	protein_coding	Gipc1	exon	ENSMUSG00000019433	ProperStrand	60	chr4	131908809	131908896	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-2.3640
chr10	17547610	17547626	protein_coding	Txlnb	exon	ENSMUSG00000039891	ProperStrand	70	chr16	23110527	23110563	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.2027
chr9	21394390	21394583	protein_coding	Yipf2	exon	ENSMUSG00000032182	ProperStrand	4	chr3	126870391	126870407	protein_coding	Ank2	intron	ENSMUSG00000032826	ProperStrand	30	2	-inf
chr4	118808479	118808882	protein_coding	Slc2a1	exon	ENSMUSG00000028645	ProperStrand	361	chr17	35299551	35299631	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-1.6129
chr14	65366130	65422238	protein_coding	Kif13b	exon	ENSMUSG00000060012	ProperStrand	37	chr16	23111374	23111500	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-5.5342
chr8	111238942	111238958	protein_coding	Zfhx3	utr5	ENSMUSG00000038872	ProperStrand	65	chr7	29136553	29136576	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.2309
chr10	25957973	25957991	protein_coding	Samd3	intron	ENSMUSG00000051354	NonProperStrand	11	chr11	6428130	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-6.4917
chr16	23111690	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	chr1	129271715	129271816	snoRNA	ENSMUSG00000065687_snoU6-53	.	ENSMUSG00000065687	ProperStrand	78	4	-6.2051
chr11	106642694	106642730	protein_coding	Ddx5	utr3	ENSMUSG00000020719	ProperStrand	181	chr3	95980321	95980410	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	4	-14.7478
chr10	42576608	42576638	LTR	ORR1A3	MaLR	chr10ORR1A342576615	ProperStrand	14	chr1	162967515	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-6.3039
chr4	131908686	131908900	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	chrX	71517821	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	36	-1.5247
chr8	40681587	40681603	protein_coding	Msr1	intron	ENSMUSG00000025044	ProperStrand	138	chr7	52715015	52715096	protein_coding	Ftl1	utr5	ENSMUSG00000050708	ProperStrand	807	1	-6.4628
chr15	100325117	100325171	protein_coding	Csrnp2	intron	ENSMUSG00000044636	ProperStrand	8	chr3	123210889	123210979	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-9.7482
chr1	88254683	88254783	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chr16	23109055	23109090	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-1.7578
chr4	33051750	33051819	pseudogene	Gm11942	.	ENSMUSG00000059634	ProperStrand	27	chr4	131865394	131865443	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-5.5455
chr3	110053005	110053043	protein_coding	Prmt6	exon	ENSMUSG00000049300	ProperStrand	4	chr8	94179957	94179974	protein_coding	Fto	intron	ENSMUSG00000055932	NonProperStrand	12	1	-21.0614
chr10	106403064	106403080	protein_coding	Acss3	exon	ENSMUSG00000035948	NonProperStrand	5	chr17	24665455	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-10.0405
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	2	-4.4904
chr11	120098077	120098093	protein_coding	Bahcc1	utr5	ENSMUSG00000039741	ProperStrand	118	chr12	17553026	17553089	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-3.8021
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr4	152856778	152856795	protein_coding	Ajap1	utr5	ENSMUSG00000039546	ProperStrand	51	1	-7.2481
chr5	33701137	33701217	protein_coding	Maea	exon	ENSMUSG00000079562	ProperStrand	32	chr10	23505151	23505241	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.1928
chr17	46861595	46861611	protein_coding	Pex6	exon	ENSMUSG00000002763	ProperStrand	292	chr4	147999294	147999320	protein_coding	Tardbp	exon	ENSMUSG00000041459	ProperStrand	120	1	-8.7530
chr8	74446729	74446745	protein_coding	Zfp617	intron	ENSMUSG00000066880	NonProperStrand	208	chr17	36088371	36088387	pseudogene	Gm8801	.	ENSMUSG00000092284	NonProperStrand	4	1	-16.4925
chr11	87240282	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	NonProperStrand	2	chr7	52381973	52382015	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	NonProperStrand	2	1	-inf
chr7	27981274	27981290	protein_coding	Snrpa	utr5	ENSMUSG00000061479	ProperStrand	56	chr7	29136537	29136579	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.4821
chr7	121414598	121417367	protein_coding	Psma1	exon	ENSMUSG00000030751	ProperStrand	9	chr17	13112566	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-8.3896
chr6	54767338	54838808	protein_coding	Znrf2	utr3	ENSMUSG00000058446	ProperStrand	13	chr16	23110902	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-4.2316
chr4	131866181	131866281	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	chr16	20684329	20684387	snoRNA	ENSMUSG00000077239_Snord66	.	ENSMUSG00000077239	ProperStrand	159	9	-19.2422
chr7	151031398	151031439	protein_coding	Dhcr7	exon	ENSMUSG00000058454	ProperStrand	30	chr1	155596685	155596701	protein_coding	Rnasel	utr5	ENSMUSG00000066800	NonProperStrand	3	1	-inf
chr13	11680524	11680542	protein_coding	Ryr2	intron	ENSMUSG00000021313	ProperStrand	61	chr7	116663702	116663759	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.4834
chr2	5792578	5792599	protein_coding	Sec61a2	utr3	ENSMUSG00000025816	ProperStrand	4	chr5	120889875	120889892	protein_coding	Lhx5	intron	ENSMUSG00000029595	NonProperStrand	106	1	-17.6441
chr18	47972404	47972420	DNA	MER97c	MER1_type?	chr18MER97c47972406	NonProperStrand	2	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-15.1780
chr19	11271200	11271217	protein_coding	Ms4a13	utr5	ENSMUSG00000057240	ProperStrand	59	chr11	106362640	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-7.4380
chr17	39979983	39980105	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	5	-6.4428
chr18	5748790	5748806	protein_coding	Zeb1	exon	ENSMUSG00000024238	ProperStrand	24	chr8	113366333	113366353	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	1	-11.0321
chr17	32453268	32453285	protein_coding	Akap8	exon	ENSMUSG00000024045	ProperStrand	339	chr2	22444482	22444590	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-4.3899
chr16	13414162	13414178	protein_coding	Mkl2	utr3	ENSMUSG00000009569	ProperStrand	55	chr4	122970391	122970470	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	2	-12.1552
chr12	55835661	55835704	snRNA	ENSMUSG00000075960_U1	.	ENSMUSG00000075960	ProperStrand	210	chr6	71832548	71832648	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-3.2389
chr13	75905593	75905618	snoRNA	ENSMUSG00000077449_SNORA42	.	ENSMUSG00000077449	ProperStrand	26	chr17	26360446	26360536	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	1	-11.7200
chr8	87515134	87515203	protein_coding	Hook2	exon	ENSMUSG00000052566	ProperStrand	204	chr4	131865393	131865483	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-1.8599
chr11	31038043	31038123	LTR	LTRIS2	ERV1	chr11LTRIS231037897	ProperStrand	1	chr1	45028585	45028675	LTR	LTRIS2	ERV1	chr1LTRIS245028245	ProperStrand	1	1	-inf
chr11	102737997	102738016	lincRNA	Gm17536	intron	ENSMUSG00000091056	ProperStrand	15	chr1	162965979	162965999	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-6.3018
chr2	90235315	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	86447297	86447314	protein_coding	Abhd2	intron	ENSMUSG00000039202	NonProperStrand	12	1	-7.6663
mmu-miR-6238	2	19	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr7	52382755	52382802	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-4.0647
chr11	115682132	115682162	protein_coding	Tsen54	exon	ENSMUSG00000020781	ProperStrand	2	chr5	130300419	130300509	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-9.6890
chr10	39372483	39372583	lincRNA	E130307A14Rik	intron	ENSMUSG00000087177	ProperStrand	14	chr7	148634766	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-6.8488
chr11	48613896	48619149	protein_coding	Gnb2l1	utr5	ENSMUSG00000020372	ProperStrand	347	chr16	23111770	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-1.0197
chr3	32609959	32609984	protein_coding	Actl6a	intron	ENSMUSG00000027671	ProperStrand	31	chr11	97642952	97643008	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.6570
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr15	31226074	31226090	protein_coding	Ankrd33b	utr3	ENSMUSG00000022237	ProperStrand	55	1	-11.5454
chr2	54965336	54965352	protein_coding	Galnt13	exon	ENSMUSG00000060988	ProperStrand	45	chr16	23111776	23111803	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.3757
chr4	148608847	148608864	protein_coding	Kif1b	utr3	ENSMUSG00000063077	NonProperStrand	19	chr2	32818883	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-7.7645
chr7	52973443	52975718	protein_coding	Rpl18	exon	ENSMUSG00000059070	ProperStrand	116	chr7	118219591	118219740	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	3	-7.5537
chr2	126578021	126578111	protein_coding	Usp8	exon	ENSMUSG00000027363	ProperStrand	40	chr17	13112498	13112578	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-5.3659
chr11	83919696	83919776	protein_coding	Tada2a	exon	ENSMUSG00000018651	ProperStrand	32	chr16	23110912	23111002	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.9664
chr10	61580105	61580142	protein_coding	2010107G23Rik	intron	ENSMUSG00000020083	ProperStrand	1	chr18	35716811	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-inf
chr1	93197134	93199362	protein_coding	Scly	exon	ENSMUSG00000026307	ProperStrand	3	chr14	33005138	33005209	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-10.2437
chr7	13616233	13616333	protein_coding	Trim28	utr3	ENSMUSG00000005566	ProperStrand	296	chr7	142884942	142884983	protein_coding	Mki67	exon	ENSMUSG00000031004	ProperStrand	286	3	-15.8036
chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	chr1	161162444	161162509	protein_coding	Rfwd2	utr5	ENSMUSG00000040782	ProperStrand	17	1	-12.0046
chr14	11815937	11815957	protein_coding	Fhit	intron	ENSMUSG00000060579	ProperStrand	32	chr8	32260335	32260370	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-5.8566
chr11	105795906	105796006	protein_coding	Cyb561	utr3	ENSMUSG00000019590	ProperStrand	13	chr11	101327080	101327138	protein_coding	Vat1	exon	ENSMUSG00000034993	ProperStrand	69	2	-inf
chr4	137352026	137352126	protein_coding-noncoding	Alpl	utr3	ENSMUSG00000028766	ProperStrand	2	chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	1	-18.1707
chr4	103100536	103100554	lincRNA	Gm12718	intron	ENSMUSG00000086136	ProperStrand	10	chr18	75161108	75161159	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	1	-12.6834
chr9	78328391	78328435	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr2	111784899	111784915	protein_coding	Olfr1307	exon	ENSMUSG00000074953	NonProperStrand	7	2	-17.0814
chr11	3426352	3426368	protein_coding	Smtn	exon	ENSMUSG00000020439	ProperStrand	222	chr2	26493457	26493474	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-1.5200
chr13	56353448	56353465	protein_coding	Neurog1	utr5	ENSMUSG00000048904	ProperStrand	105	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-6.6281
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	1	-4.7193
chr8	11312833	11312850	protein_coding	Col4a2	utr5	ENSMUSG00000031503	ProperStrand	74	chr16	23110829	23110919	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-2.4816
chr2	90235316	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	77687802	77687822	protein_coding	Trappc10	intron	ENSMUSG00000000374	NonProperStrand	8	1	-8.5166
chr1	162968441	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	chr5	108334209	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	9	-3.3958
chr3	104442720	104453187	protein_coding	Slc16a1	utr5	ENSMUSG00000032902	ProperStrand	48	chr9	120038609	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.4442
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr15	31522092	31522129	protein_coding	Cct5	exon	ENSMUSG00000022234	ProperStrand	116	1	-6.6643
chr15	89755386	89755476	LTR	MTD	MaLR	chr15MTD89755222	ProperStrand	1	chr15	89755509	89755599	LTR	RLTR31_Mm	ERVK	chr15RLTR31_Mm89755455	NonProperStrand	1	1	-inf
chr15	97961850	97961871	protein_coding	Pfkm	exon	ENSMUSG00000033065	ProperStrand	8	chr16	23111373	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.8232
chr1	173531241	173531257	protein_coding	Ly9	exon	ENSMUSG00000004707	ProperStrand	7	chr19	6335077	6335455	protein_coding	Men1	exon	ENSMUSG00000024947	NonProperStrand	4	1	-inf
chr2	121587713	121587730	protein_coding	Frmd5	intron	ENSMUSG00000027238	ProperStrand	35	chr5	121655126	121655154	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.7731
chr17	46542974	46545971	protein_coding	Zfp318	exon	ENSMUSG00000015597	ProperStrand	44	chr18	35714256	35714291	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	3	-9.8178
chr11	50108797	50108885	protein_coding	Canx	utr3	ENSMUSG00000020368	ProperStrand	296	chr4	116828379	116828451	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-5.2334
chr11	118270192	118272176	protein_coding	Cant1	exon	ENSMUSG00000025575	ProperStrand	22	chr13	112278554	112278570	protein_coding	Gpbp1	utr5	ENSMUSG00000032745	ProperStrand	85	1	-14.6422
chr1	121314056	121314090	protein_coding	Inhbb	exon	ENSMUSG00000037035	ProperStrand	10	chr11	62416959	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-9.6758
chrX	92621812	92621874	protein_coding	Fam123b	exon	ENSMUSG00000050332	ProperStrand	57	chr15	5068442	5068480	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-6.1681
chr1	182530643	182530696	protein_coding	Parp1	utr3	ENSMUSG00000026496	NonProperStrand	2	chr19	8963027	8963081	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-17.8653
chr10	77432751	77432770	protein_coding	Trpm2	intron	ENSMUSG00000009292	NonProperStrand	23	chr7	29136525	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	4	-13.4986
chr8	121698535	121698625	protein_coding	Cdh13	intron	ENSMUSG00000031841	NonProperStrand	17	chr8	126774468	126774558	protein_coding	Galnt2	intron	ENSMUSG00000089704	NonProperStrand	2	1	-inf
chr8	110076222	110076279	protein_coding	Wwp2	exon	ENSMUSG00000031930	ProperStrand	18	chr5	108334266	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	2	-11.6399
chr2	90235299	90235341	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	108927556	108927574	protein_coding	Pfkfb4	exon	ENSMUSG00000025648	ProperStrand	6	1	-9.1372
chr1	180267129	180267199	protein_coding	Hnrnpu	exon	ENSMUSG00000039630	ProperStrand	286	chr2	26768393	26768421	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	3	-6.9554
chr11	68836224	68836275	protein_coding	1500010J02Rik	utr5	ENSMUSG00000020898	ProperStrand	38	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-8.6556
chr1	129271707	129271735	snoRNA	ENSMUSG00000065687_snoU6-53	.	ENSMUSG00000065687	ProperStrand	78	chr12	81492598	81492644	snoRNA	ENSMUSG00000088158_Scarna3b	.	ENSMUSG00000088158	ProperStrand	147	2	-17.2489
chr6	38507866	38556244	protein_coding	Luc7l2	utr3	ENSMUSG00000029823	ProperStrand	85	chr19	8800356	8800454	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-5.0284
chr17	28023311	28023327	protein_coding	Uhrf1bp1	exon	ENSMUSG00000039512	NonProperStrand	14	chr11	97642984	97643074	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-8.6362
chr11	48616641	48616710	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	chr7	116663633	116663761	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-0.8066
chr17	34069111	34069127	protein_coding	Rgl2	exon	ENSMUSG00000041354	NonProperStrand	5	chr2	125499562	125499579	protein_coding	Eid1	utr3	ENSMUSG00000091337	ProperStrand	60	1	-18.3592
chr5	149860359	149860424	protein_coding	Hmgb1	exon	ENSMUSG00000066551	ProperStrand	99	chr10	80641700	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	1	-6.5543
mmu-miR-2136	1	21	miRNA	mmu-miR-2136	.	mmu-miR-2136	ProperStrand	2	chr12	107067349	107067366	protein_coding	Papola	exon	ENSMUSG00000021111	NonProperStrand	11	2	-inf
chr8	72287172	72287188	protein_coding	Zfp866	utr3	ENSMUSG00000043090	NonProperStrand	134	chr19	8963066	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.0723
chr14	67689072	67690932	protein_coding	Ppp2r2a	exon	ENSMUSG00000022052	ProperStrand	45	chr9	44142973	44143063	protein_coding	H2afx	exon	ENSMUSG00000049932	ProperStrand	137	1	-12.2364
chr4	85016349	85016365	protein_coding	Sh3gl2	intron	ENSMUSG00000028488	NonProperStrand	313	chr10	75322284	75322482	protein_coding	Mif	exon	ENSMUSG00000033307	ProperStrand	146	1	-8.2238
chr14	35225594	35225611	protein_coding	Bmpr1a	utr3	ENSMUSG00000021796	ProperStrand	21	chr12	85350481	85350499	protein_coding	Acot1	utr5	ENSMUSG00000072949	ProperStrand	72	1	-15.0812
chr4	116826935	116826980	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	chr11	62416975	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	3	-8.1249
chr11	60361205	60361228	protein_coding	Alkbh5	exon	ENSMUSG00000042650	ProperStrand	203	chr1	162965995	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-1.5406
chr14	22662658	22662709	protein_coding-noncoding	Vdac2	utr5	ENSMUSG00000021771	ProperStrand	2	chr11	69483136	69483181	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-9.6187
chr12	56700674	56700695	protein_coding	Insm2	exon	ENSMUSG00000045440	NonProperStrand	22	chr11	6428105	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-12.1137
chr2	59637711	59637801	protein_coding	Tanc1	exon	ENSMUSG00000035168	ProperStrand	80	chr10	23505170	23505250	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-0.8673
chr9	120039543	120039633	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	chr2	166888977	166889003	snoRNA	ENSMUSG00000077515_SNORD12	.	ENSMUSG00000077515	ProperStrand	191	5	-7.7506
chr9	22136356	22136441	protein_coding	Anln	utr3	ENSMUSG00000036777	ProperStrand	133	chr4	131865425	131865459	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	2	-4.4986
chr13	21272673	21272754	protein_coding	Trim27	exon	ENSMUSG00000021326	ProperStrand	28	chr9	96737500	96737516	protein_coding	Acpl2	intron	ENSMUSG00000043587	ProperStrand	4	1	-20.1122
chr2	167163367	167163438	protein_coding	B4galt5	intron	ENSMUSG00000017929	ProperStrand	22	chr1	167932738	167932755	protein_coding	Pou2f1	utr5	ENSMUSG00000026565	ProperStrand	34	1	-16.4669
chr11	15212155	15212171	LINE	Lx	L1	chr11Lx15211662	ProperStrand	54	chr3	96218558	96218626	misc_RNA	Telomerase-vert	.	ENSMUSG00000064796	ProperStrand	443	1	-9.5217
chr11	72774720	72774800	protein_coding	Atp2a3	utr5	ENSMUSG00000020788	ProperStrand	29	chr19	8963093	8963183	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.5658
chr4	125272753	125272808	protein_coding	Grik3	intron	ENSMUSG00000001985	ProperStrand	126	chr17	24857750	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.1700
chr12	83019596	83019643	protein_coding	Pcnx	exon	ENSMUSG00000021140	ProperStrand	32	chr7	109149271	109149287	protein_coding	Numa1	exon	ENSMUSG00000066306	NonProperStrand	171	1	-12.4814
chr6	122272951	122273046	protein_coding	Phc1	intron	ENSMUSG00000040669	ProperStrand	158	chr18	33954895	33954948	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	3	-5.1382
chr18	34767670	34768122	protein_coding	Brd8	exon	ENSMUSG00000003778	ProperStrand	27	chr9	120039585	120039665	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-4.8289
chrX	47917636	47917736	lincRNA	6720401G13Rik	intron	ENSMUSG00000085396	ProperStrand	34	chr4	131865913	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.7115
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr3	135275489	135275506	protein_coding	Nfkb1	exon	ENSMUSG00000028163	NonProperStrand	16	1	-7.0757
chr4	86221846	86221868	protein_coding	Rraga	exon	ENSMUSG00000070934	ProperStrand	13	chr3	108357254	108357352	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-7.5818
chr11	78313939	78313956	protein_coding	Vtn	exon	ENSMUSG00000017344	ProperStrand	188	chr7	116664870	116664925	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-0.8565
chr19	9018593	9020258	protein_coding	Mta2	exon	ENSMUSG00000071646	ProperStrand	70	chr16	23110454	23110522	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.2027
chr14	76246133	76246523	protein_coding	Tpt1	exon	ENSMUSG00000060126	ProperStrand	236	chr3	108357275	108357355	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-2.0817
chr7	85926462	85927700	protein_coding	Mrpl46	exon	ENSMUSG00000030612	ProperStrand	6	chr11	68886974	68886997	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-8.8009
chr13	41730066	41730116	protein_coding	Tmem170b	utr3	ENSMUSG00000087370	ProperStrand	15	chr4	131866260	131866281	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-6.3678
chr17	32453268	32453285	protein_coding	Akap8	exon	ENSMUSG00000024045	ProperStrand	339	chr16	18240807	18240907	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	1	-5.6943
chr6	143153869	143153969	protein_coding	Etnk1	utr3	ENSMUSG00000030275	ProperStrand	61	chr1	162965981	162966045	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-3.5727
chr2	102142099	102142135	protein_coding	Trim44	utr3	ENSMUSG00000027189	ProperStrand	26	chr8	73419657	73419729	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.7022
chrX	148706015	148706070	protein_coding	Kdm5c	exon	ENSMUSG00000025332	ProperStrand	139	chr5	111812088	111812105	protein_coding	Pitpnb	exon	ENSMUSG00000050017	ProperStrand	137	1	-9.9699
chr14	61113419	61113436	LINE	L1MB3	L1	chr14L1MB361113375	NonProperStrand	72	chr8	120109229	120110409	protein_coding	Plcg2	exon	ENSMUSG00000034330	ProperStrand	57	1	-13.0494
chr18	10067647	10067664	protein_coding	Rock1	exon	ENSMUSG00000024290	NonProperStrand	22	chr9	120038589	120038673	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.9307
chrX	71471623	71475989	protein_coding	Flna	exon	ENSMUSG00000031328	ProperStrand	134	chr4	131908236	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-1.0485
chr4	116826546	116826578	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	chr4	131865393	131865493	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	4	-6.0858
chr13	109112902	109112992	protein_coding	Depdc1b	intron	ENSMUSG00000021697	ProperStrand	19	chr4	131865378	131865458	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-6.2464
chr2	90235313	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	38101564	38101669	protein_coding	Eif5b	exon	ENSMUSG00000026083	ProperStrand	118	1	-3.2036
chr7	133611528	133612027	protein_coding	Sh2b1	exon	ENSMUSG00000030733	ProperStrand	17	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.8783
chr5	75473198	75473215	protein_coding	Gsx2	utr3	ENSMUSG00000035946	ProperStrand	307	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-2.7757
chr16	16884434	16886016	protein_coding	Top3b	exon	ENSMUSG00000022779	ProperStrand	36	chr4	131908689	131908739	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.9880
chr18	82803179	82806139	protein_coding	Zfp236	exon	ENSMUSG00000041258	ProperStrand	15	chr18	35716684	35716761	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.7126
chr4	140532041	140532122	protein_coding	Sdhb	exon	ENSMUSG00000009863	ProperStrand	14	chr3	104647853	104647890	protein_coding	Capza1	exon	ENSMUSG00000070372	ProperStrand	42	1	-17.0360
chr5	74489217	74489622	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr7	150717298	150717396	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	5	-1.2296
chr16	37882963	37882979	protein_coding	Lrrc58	utr3	ENSMUSG00000034158	NonProperStrand	45	chr11	69481400	69481479	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	3	-9.2151
chr9	52968090	53012221	protein_coding	Ddx10	exon	ENSMUSG00000053289	ProperStrand	40	chr17	24857766	24857846	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.0012
chr19	23215858	23215874	protein_coding	Klf9	utr5	ENSMUSG00000033863	ProperStrand	83	chr3	68825312	68826154	protein_coding	Smc4	exon	ENSMUSG00000034349	ProperStrand	21	1	-14.7691
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr14	71065339	71065355	protein_coding	Xpo7	utr3	ENSMUSG00000022100	ProperStrand	109	1	-4.7432
chr9	48876871	48877719	protein_coding	Zw10	exon	ENSMUSG00000032264	ProperStrand	20	chr2	155498740	155498782	protein_coding	Trpc4ap	exon	ENSMUSG00000038324	ProperStrand	38	1	-16.4324
chr2	150578785	150578855	protein_coding	Entpd6	exon	ENSMUSG00000033068	ProperStrand	12	chr10	23505178	23505268	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-10.0058
chr16	57391759	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr9	64022855	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	2	-4.7623
chr2	9873132	9873195	protein_coding	Taf3	exon	ENSMUSG00000025782	ProperStrand	62	chr1	88247742	88247802	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-5.0333
chr17	56197269	56198686	protein_coding	Chaf1a	exon	ENSMUSG00000002835	ProperStrand	23	chr4	131908689	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-4.8408
chr1	178493412	178493429	LTR	MTE2b	MaLR	chr1MTE2b178493379	NonProperStrand	1	chr5	117732923	117732975	protein_coding	Pebp1	utr3	ENSMUSG00000032959	ProperStrand	54	1	-inf
chr7	56991582	56991601	LTR	ORR1A4-int	MaLR	chr7ORR1A4-int56991017	ProperStrand	1	chr7	30231554	30231589	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	1	-inf
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	147009105	147009122	protein_coding	Nkx2-2	utr3	ENSMUSG00000027434	NonProperStrand	84	1	-3.8272
chr3	103718540	103718578	protein_coding	Rsbn1	exon	ENSMUSG00000044098	ProperStrand	32	chr8	129468746	129468837	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	2	-9.2306
chr7	13615897	13616087	protein_coding	Trim28	exon	ENSMUSG00000005566	ProperStrand	296	chr1	89091564	89092064	protein_coding	Chrnd	exon	ENSMUSG00000026251	ProperStrand	32	1	-11.3839
chr10	75140630	75140706	protein_coding	Cabin1	intron	ENSMUSG00000020196	ProperStrand	62	chr9	119256673	119256699	protein_coding	Acaa1a	intron	ENSMUSG00000036138	ProperStrand	15	1	-16.0934
chr5	48069483	48069499	LTR	MTC	MaLR	chr5MTC48069211	NonProperStrand	1	chr11	98082353	98082444	protein_coding	Cdk12	exon	ENSMUSG00000003119	ProperStrand	50	1	-inf
chr6	98955575	99128819	protein_coding	Foxp1	intron	ENSMUSG00000030067	ProperStrand	16	chr15	79908814	79913350	protein_coding	Rpl3	exon	ENSMUSG00000060036	ProperStrand	8342	3	-14.3497
chr8	13416896	13416912	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr16	44225761	44225778	protein_coding	Gm608	utr3	ENSMUSG00000068284	NonProperStrand	29	1	-7.9068
chr3	116200531	116200621	protein_coding	Rtcd1	exon	ENSMUSG00000000339	ProperStrand	6	chr4	131908355	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-5.6461
chr10	80039750	80039781	protein_coding	Klf16	exon	ENSMUSG00000035397	ProperStrand	5	chr6	34996116	34996133	protein_coding	Cnot4	utr3	ENSMUSG00000038784	NonProperStrand	2	1	-inf
chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-1.7625
chr12	79985991	79986091	protein_coding	Eif2s1	utr3	ENSMUSG00000021116	ProperStrand	11	chr1	162966830	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-9.6957
chr11	80046416	80046506	protein_coding	Rhot1	intron	ENSMUSG00000017686	ProperStrand	40	chr2	125483292	125483382	protein_coding	Shc4	intron	ENSMUSG00000035109	ProperStrand	19	1	-16.4981
chr11	6410326	6410344	protein_coding	Myo1g	exon	ENSMUSG00000020437	ProperStrand	18	chr9	15119632	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.8766
mmu-miR-1949	8	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr5	151449508	151449526	protein_coding	N4bp2l2	intron	ENSMUSG00000029655	NonProperStrand	3	1	-14.5097
chr1	132992775	132992796	protein_coding	Mapkapk2	intron	ENSMUSG00000016528	ProperStrand	9	chr7	29188691	29188903	protein_coding	Samd4b	exon	ENSMUSG00000037513	ProperStrand	72	1	-16.8131
chr7	54105606	54105706	protein_coding	Ldha	exon	ENSMUSG00000063229	ProperStrand	280	chr1	162966002	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-1.0950
chr4	106872985	106873049	protein_coding	Tmem59	exon	ENSMUSG00000028618	ProperStrand	29	chr16	23110963	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0921
chr7	17040701	17040717	protein_coding	Tmem160	exon	ENSMUSG00000019158	ProperStrand	55	chr10	6363289	6363330	protein_coding	Mthfd1l	intron	ENSMUSG00000040675	ProperStrand	50	1	-13.8534
chr9	56961436	56961468	protein_coding	Sin3a	exon	ENSMUSG00000042557	ProperStrand	108	chr7	118219574	118219647	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-3.0857
chr2	157854273	157854289	protein_coding	Rprd1b	utr5	ENSMUSG00000027651	ProperStrand	33	chr6	70794802	70794820	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	1	-12.6286
chr7	149170854	149171340	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	chr15	34370574	34370664	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-3.2609
chr11	59153777	59153867	Low_complexity	T-rich	Low_complexity	chr11T-rich59153778	ProperStrand	1	chr11	59153616	59153696	SINE	B4A	B4	chr11B4A59153581	NonProperStrand	1	1	-inf
chr9	72566047	72566110	protein_coding	Nedd4	exon	ENSMUSG00000032216	ProperStrand	308	chr2	26493364	26493464	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-1.0696
chr10	129835372	129835462	LINE	L1Md_F2	L1	chr10L1Md_F2129833917	ProperStrand	1	chr16	98284289	98284369	LINE	L1_Mus1	L1	chr16L1_Mus198283327	ProperStrand	23	1	-inf
chr5	100855902	100855972	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr4	137120830	137120878	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	3	-5.1132
chrX	149828130	149828146	protein_coding	Klf8	utr3	ENSMUSG00000041649	NonProperStrand	107	chr11	62416993	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-4.9156
chr15	40574751	40574772	protein_coding	Zfpm2	intron	ENSMUSG00000022306	NonProperStrand	35	chr4	131908689	131908789	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.0337
chr15	82686309	82686399	protein_coding	Tcf20	exon	ENSMUSG00000041852	ProperStrand	658	chr2	26767031	26767558	protein_coding	Rpl7a	exon	ENSMUSG00000062647	ProperStrand	234	1	-5.8267
chr7	74432432	74432522	protein_coding	Mef2a	intron	ENSMUSG00000030557	NonProperStrand	2	chr7	74450250	74450340	protein_coding	Mef2a	intron	ENSMUSG00000030557	ProperStrand	18	1	-21.6032
chr14	20451772	20451789	LTR	IAPLTR3-int	ERVK	chr14IAPLTR3-int20447903	ProperStrand	44	chr4	131908753	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-3.1061
chr15	47527247	47527263	protein_coding	Csmd3	exon	ENSMUSG00000022311	NonProperStrand	25	chr1	162968458	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-7.8269
chr2	51967905	51967989	protein_coding	Rif1	exon	ENSMUSG00000036202	ProperStrand	201	chr5	130300436	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	6	-6.7449
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	77738902	77738918	protein_coding	Noa1	exon	ENSMUSG00000036285	ProperStrand	147	3	-7.2400
chr4	122960515	122971998	protein_coding	Pabpc4	utr5	ENSMUSG00000011257	ProperStrand	85	chr11	69483136	69483278	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-3.4218
chr9	53033697	53033735	protein_coding	Ddx10	exon	ENSMUSG00000053289	ProperStrand	40	chr7	29136578	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-7.8601
chr15	81872732	81872761	protein_coding	Nhp2l1	exon	ENSMUSG00000063480	ProperStrand	40	chr9	120038589	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	3	-9.3362
chr17	35089182	35089249	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	chr14	52829460	52829560	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	4	-4.8030
chr7	51792979	51793069	protein_coding	Pold1	exon	ENSMUSG00000038644	ProperStrand	50	chr17	24857717	24857797	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.6076
chr9	78023106	78023184	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr14	65372831	65372889	snoRNA	ENSMUSG00000064442_SNORA36	.	ENSMUSG00000064442	ProperStrand	296	1	-2.8713
chr13	11830668	11830686	protein_coding	Ryr2	exon	ENSMUSG00000021313	NonProperStrand	15	chr2	26768049	26768091	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	1	-11.2076
chr8	73032356	73032388	protein_coding	2810422J05Rik	exon	ENSMUSG00000055553	ProperStrand	171	chr2	22444730	22444797	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	5	-19.5954
chrX	71589885	71589907	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr10	90581034	90581118	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	3	-5.4151
chr18	24363855	24363872	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr10	12902322	12902670	protein_coding	Ltv1	exon	ENSMUSG00000019814	ProperStrand	76	1	-10.8947
chr11	8334538	8351351	protein_coding	Tns3	exon	ENSMUSG00000020422	ProperStrand	81	chr17	13112450	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	5	-16.4163
chr2	179921303	179933307	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr7	29136588	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-0.9627
chr14	20617661	20617707	protein_coding	Nid2	exon	ENSMUSG00000021806	ProperStrand	372	chr13	20374830	20374847	protein_coding	Elmo1	exon	ENSMUSG00000041112	NonProperStrand	34	1	-10.8040
chr7	19271195	19271212	protein_coding	Psg20	intron	ENSMUSG00000063305	NonProperStrand	1	chr9	120038552	120038570	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-inf
chr1	88247257	88247974	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chr10	110918547	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	5	-0.7585
chr8	73032339	73032384	protein_coding	2810422J05Rik	exon	ENSMUSG00000055553	ProperStrand	171	chr5	74489609	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-1.9484
chr5	100855929	100855974	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr1	133252343	133252391	protein_coding	Srgap2	intron	ENSMUSG00000026425	ProperStrand	299	3	-8.7697
chrX	162729142	162729158	protein_coding	Gpm6b	intron	ENSMUSG00000031342	ProperStrand	4	chr17	35088957	35089006	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-11.5063
chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	chr8	32260372	32260425	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-1.3351
chr19	8990772	8990872	protein_coding	Ganab	utr3	ENSMUSG00000071650	ProperStrand	145	chr11	97642952	97642992	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.1218
chr5	64302241	64302297	protein_coding	Rell1	utr3	ENSMUSG00000047881	ProperStrand	24	chr4	131908236	131908320	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-10.3723
chr3	53327631	53329712	protein_coding	Frem2	exon	ENSMUSG00000037016	ProperStrand	28	chr18	35716766	35716846	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.5142
chr7	108032297	108032387	protein_coding	Arhgef17	exon	ENSMUSG00000032875	ProperStrand	33	chr7	54443903	54443983	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-10.9354
chr1	137271110	137271126	protein_coding	Shisa4	exon	ENSMUSG00000041889	ProperStrand	64	chr4	131908831	131908900	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.1372
chr19	46157822	46157849	protein_coding	Nolc1	exon	ENSMUSG00000015176	ProperStrand	53	chr11	69483189	69483278	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	4	-9.5031
chr15	76735465	76736306	protein_coding	Rpl8	exon	ENSMUSG00000003970	ProperStrand	191	chr14	52829460	52829546	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	2	-9.6067
chr9	15119281	15119428	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	chr18	35714143	35714291	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	94	-inf
chr10	74773969	74774059	protein_coding	Specc1l	utr3	ENSMUSG00000033444	ProperStrand	36	chr10	23505158	23505238	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.9992
chrX	12867633	12868040	protein_coding	Ddx3x	exon	ENSMUSG00000000787	ProperStrand	67	chr9	15118323	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	3	-8.2207
chr7	26509643	26517350	protein_coding	Hnrnpul1	intron	ENSMUSG00000040725	ProperStrand	84	chr7	116663634	116663743	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-3.5438
chr8	73282650	73282738	protein_coding	Mpv17l2	utr3	ENSMUSG00000035559	ProperStrand	14	chr18	35714145	35714214	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	4	-21.7859
chr1	88252836	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	chr11	6520317	6520420	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	8	-14.9506
chr10	33730007	33730064	protein_coding	Rwdd1	intron	ENSMUSG00000019782	ProperStrand	7	chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	1	-13.8686
chr17	25569446	25569536	protein_coding	Cacna1h	utr3	ENSMUSG00000024112	NonProperStrand	3	chr18	58346306	58346386	protein_coding	Fbn2	intron	ENSMUSG00000024598	ProperStrand	16	1	-inf
chr1	63226110	63226146	protein_coding	Eef1b2	exon	ENSMUSG00000025967	ProperStrand	106	chr18	75161563	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-6.0776
chr1	102076739	102076779	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	chr9	15118245	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	3	-2.0703
chr3	9543790	9543814	protein_coding	Zfp704	intron	ENSMUSG00000040209	ProperStrand	67	chr9	120038626	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.8429
chr13	98283242	98283332	LTR	MTEa	MaLR	chr13MTEa98283149	NonProperStrand	2	chr14	67670735	67670815	protein_coding	Ppp2r2a	intron	ENSMUSG00000022052	ProperStrand	45	2	-inf
chr11	6428035	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr3	153573528	153573571	snoRNA	ENSMUSG00000064731_Snord45b	.	ENSMUSG00000064731	ProperStrand	205	2	-2.3247
chr5	138608531	138608610	protein_coding	Mcm7	exon	ENSMUSG00000029730	ProperStrand	258	chr5	112865460	112865476	protein_coding	Sez6l	exon	ENSMUSG00000058153	ProperStrand	81	1	-9.7865
chr9	56775853	56775870	protein_coding	Snx33	utr5	ENSMUSG00000032733	NonProperStrand	116	chr11	106362328	106362381	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	2	-7.5743
chr5	130300447	130300547	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	chr1	173041632	173041649	tRNA	tRNA710-ValCAC	.	843994	ProperStrand	206	1	-0.7281
chr15	36182795	36182822	protein_coding	Rnf19a	exon	ENSMUSG00000022280	ProperStrand	9	chr16	23110940	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-5.3337
chr11	107028032	107028105	protein_coding	Nol11	utr3	ENSMUSG00000018433	ProperStrand	12	chr4	131865950	131865987	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.6729
chr13	114586908	114586926	protein_coding	Arl15	intron	ENSMUSG00000042348	NonProperStrand	19	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-7.4875
chr8	98270007	98270082	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	chr12	92811923	92812013	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	1	-1.3530
chr11	109086896	109086914	protein_coding	Rgs9	utr3	ENSMUSG00000020599	NonProperStrand	18	chr4	131908826	131908896	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.1942
chr8	89252157	89252247	protein_coding	Siah1a	intron	ENSMUSG00000036840	ProperStrand	6	chr4	131866187	131866267	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-8.2891
chr5	136707644	136707661	protein_coding	Sh2b2	exon	ENSMUSG00000005057	NonProperStrand	101	chr2	11602046	11603567	protein_coding	Il2ra	exon	ENSMUSG00000026770	ProperStrand	17	1	-14.8361
chr7	53128287	53128366	protein_coding	Kdelr1	utr5	ENSMUSG00000002778	ProperStrand	7	chr16	23109046	23109090	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-11.6937
chr11	107340845	107340923	protein_coding	Psmd12	utr5	ENSMUSG00000020720	ProperStrand	31	chr16	23110456	23110546	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	6	-18.6041
chr1	153201212	153201832	protein_coding	Ivns1abp	exon	ENSMUSG00000023150	ProperStrand	51	chr17	45706281	45706453	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	1	-7.0530
chr7	54104390	54104440	protein_coding	Ldha	exon	ENSMUSG00000063229	ProperStrand	280	chr14	52829477	52829569	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	3	-12.0835
chr10	77072585	77079968	protein_coding	Sumo3	utr3	ENSMUSG00000020265	ProperStrand	31	chr16	23110858	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-4.8130
chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	chrX	71517821	71517892	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-3.6306
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr17	30772308	30772324	protein_coding	Dnahc8	utr5	ENSMUSG00000033826	ProperStrand	246	1	-5.0204
chr7	30074408	30074429	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr1	174427115	174427131	protein_coding	Igsf9	utr3	ENSMUSG00000037995	NonProperStrand	7	1	-14.8603
chr7	136800631	136800649	SINE	RSINE1	B4	chr7RSINE1136800606	ProperStrand	216	chr1	88423324	88423340	protein_coding	Ptma	utr5	ENSMUSG00000026238	ProperStrand	385	1	-7.0362
chr9	45396865	45396945	protein_coding	Dscaml1	intron	ENSMUSG00000032087	NonProperStrand	10	chr9	109976903	109976993	protein_coding	Mtap4	intron	ENSMUSG00000032479	NonProperStrand	9	1	-19.9862
chr2	124921473	124921650	protein_coding	Myef2	exon	ENSMUSG00000027201	ProperStrand	19	chr9	15118287	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-9.3336
chr3	153575088	153575167	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	chr19	8799027	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	8	-14.7917
chr17	47075606	47075622	protein_coding	Ubr2	exon	ENSMUSG00000023977	ProperStrand	172	chr2	130101988	130102051	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-3.3632
chr19	41348803	41348819	protein_coding	Pik3ap1	exon	ENSMUSG00000025017	NonProperStrand	26	chr7	117189864	117189912	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-7.8796
chr13	21842349	21842375	protein_coding	Hist1h4k	exon	ENSMUSG00000064288	ProperStrand	46	chr2	26493366	26493449	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-7.1042
chr19	56796961	56796978	protein_coding	Adrb1	exon	ENSMUSG00000035283	NonProperStrand	8	chr12	17553062	17553090	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-9.1689
chr3	137528541	137529008	protein_coding	H2afz	exon	ENSMUSG00000037894	ProperStrand	72	chr19	46726844	46726924	protein_coding	D19Wsu162e	intron	ENSMUSG00000047731	ProperStrand	16	1	-15.6412
chr2	129033423	129033523	protein_coding	Slc20a1	exon	ENSMUSG00000027397	ProperStrand	81	chr1	162968449	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	7	-inf
chr13	9833551	9833618	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr5	23358029	23358078	snoRNA	ENSMUSG00000093321_Snord93	.	ENSMUSG00000093321	ProperStrand	218	1	-2.5755
chr3	102953585	102953685	protein_coding	Dennd2c	intron	ENSMUSG00000007379	NonProperStrand	1	chr11	106362338	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-inf
chr2	90235291	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	44381241	44381328	protein_coding	Zfp42	exon	ENSMUSG00000051176	ProperStrand	127	3	-7.7890
chr11	83164646	83218021	protein_coding	Ap2b1	utr3	ENSMUSG00000035152	ProperStrand	60	chr16	23110914	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-2.3046
chr8	12757419	12757437	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr5	74489543	74489680	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	5	-3.2451
chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr5	102443022	102443040	protein_coding	Wdfy3	intron	ENSMUSG00000043940	NonProperStrand	10	1	-10.0944
mmu-miR-5100	5	20	miRNA	mmu-miR-5100	.	mmu-miR-5100	ProperStrand	132	chr15	79910820	79913349	protein_coding	Rpl3	exon	ENSMUSG00000060036	ProperStrand	8342	2	-3.9357
chr4	135792666	135792684	protein_coding	Asap3	exon	ENSMUSG00000036995	ProperStrand	9	chr10	23505172	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.5477
chr10	36856194	36856284	protein_coding	Marcks	exon	ENSMUSG00000069662	ProperStrand	17	chr8	129468753	129468833	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-6.9013
chr7	52382237	52382315	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	chr7	29136525	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	7	-1.1818
chr16	23110454	23110526	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	chr9	40612098	40612164	snoRNA	ENSMUSG00000075924_Snord14d	.	ENSMUSG00000075924	ProperStrand	131	4	-5.4128
chr15	76004388	76004414	protein_coding	Plec	exon	ENSMUSG00000022565	ProperStrand	186	chr7	117189864	117189955	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-4.0255
chr16	35022567	35022682	protein_coding	Ptplb	exon	ENSMUSG00000035376	ProperStrand	17	chr11	97642952	97642974	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.8122
chr12	79963115	79963141	protein_coding	Eif2s1	utr5	ENSMUSG00000021116	ProperStrand	11	chr11	69481373	69481463	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-6.5008
chr2	48760556	48760572	protein_coding	Orc4	utr3	ENSMUSG00000026761	ProperStrand	95	chr4	140503596	140503614	protein_coding	Padi2	intron	ENSMUSG00000028927	ProperStrand	24	1	-14.2471
chr2	85925137	85925217	protein_coding	Olfr1037	exon	ENSMUSG00000075205	ProperStrand	1	chr2	85896198	85896288	pseudogene	Olfr1035-ps1	.	ENSMUSG00000083418	ProperStrand	1	1	-inf
chr8	87494212	87494238	protein_coding	Prdx2	exon	ENSMUSG00000005161	ProperStrand	20	chr4	131908356	131908450	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	5	-14.5543
chr6	115876313	115876330	protein_coding	Ift122	exon	ENSMUSG00000030323	ProperStrand	20	chr18	73693165	73693189	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-7.7147
chr2	63936034	63936052	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr15	82980102	82980192	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-2.0446
chr2	179322378	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr9	63042015	63042031	protein_coding	Map2k5	exon	ENSMUSG00000058444	ProperStrand	193	1	-8.8714
chr13	53563455	53563495	protein_coding	Msx2	utr3	ENSMUSG00000021469	ProperStrand	2	chr9	120037992	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-12.0930
chr4	120647072	120648011	protein_coding	Smap2	exon	ENSMUSG00000032870	ProperStrand	13	chr6	50515220	50515257	protein_coding	Cycs	utr3	ENSMUSG00000063694	ProperStrand	11	3	-20.2592
chr1	75207596	75207827	protein_coding	Stk16	utr5	ENSMUSG00000026201	ProperStrand	17	chr11	63885336	63887052	protein_coding	Cox10	exon	ENSMUSG00000042148	NonProperStrand	187	1	-13.5969
chr9	39358287	39358304	protein_coding	Olfr958	exon	ENSMUSG00000050853	NonProperStrand	266	chr17	39985544	39985585	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-3.1101
chrX	12182377	12183423	protein_coding	Atp6ap2	exon	ENSMUSG00000031007	ProperStrand	29	chr17	24857717	24857807	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	6	-18.6975
chr9	44598075	44598093	protein_coding	Ift46	intron	ENSMUSG00000002031	NonProperStrand	28	chr7	116663713	116663767	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.8921
chr2	28531242	28531259	protein_coding	Tsc1	exon	ENSMUSG00000026812	ProperStrand	29	chr11	77995191	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-7.6324
chr9	83744211	83744301	protein_coding	Ttk	exon	ENSMUSG00000038379	ProperStrand	36	chr18	35716699	35716779	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	9	-20.9492
chr12	85135580	85135670	protein_coding	Numb	utr3	ENSMUSG00000021224	ProperStrand	81	chr19	44188368	44188431	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	1	-7.1974
chr2	26066399	26066417	protein_coding	Qsox2	utr3	ENSMUSG00000036327	ProperStrand	24	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-10.7783
chrX	91434389	91434415	protein_coding	Eif2s3x	utr3	ENSMUSG00000035150	ProperStrand	55	chr5	121655018	121655063	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.9102
chr9	96222906	96222923	protein_coding	Tfdp2	utr3	ENSMUSG00000032411	NonProperStrand	2	chr5	130300472	130300553	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-9.6890
chr9	78326817	78326870	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr19	8800085	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	5	-7.1181
chr12	110837865	110837882	protein_coding	Rtl1	intron	ENSMUSG00000085925	ProperStrand	5	chr7	117189876	117189907	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-8.3295
chr12	17285435	17285726	protein_coding	Pdia6	exon	ENSMUSG00000020571	ProperStrand	114	chr7	52382797	52382827	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	8	-19.7972
chr7	28419585	28419636	protein_coding	Akt2	exon	ENSMUSG00000004056	ProperStrand	100	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-7.5733
chr17	23949556	23952406	protein_coding	Srrm2	exon	ENSMUSG00000039218	ProperStrand	521	chr1	88247743	88247799	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	2	-2.5125
chr1	33726526	33726550	protein_coding	Prim2	utr5	ENSMUSG00000026134	ProperStrand	42	chr4	131908357	131908416	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.9630
chr11	77996560	77996618	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	chr17	24856616	24856720	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	9	-9.2504
chr11	97032923	97032977	protein_coding	Kpnb1	exon	ENSMUSG00000001440	ProperStrand	197	chr2	4829164	4829180	protein_coding	Sephs1	utr3	ENSMUSG00000026662	NonProperStrand	271	1	-7.9141
chrX	20348314	20348404	SINE	B3	B2	chrXB320348260	NonProperStrand	1	chrX	20348504	20348584	SINE	B3A	B2	chrXB3A20348431	NonProperStrand	1	1	-inf
chr2	156551989	156560882	protein_coding	Dlgap4	intron	ENSMUSG00000061689	ProperStrand	80	chr18	35716685	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	29	-21.0334
chr2	90235312	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	92104375	92104391	protein_coding	Nr2c2	exon	ENSMUSG00000005893	ProperStrand	101	1	-3.4865
chr6	115757060	115757150	protein_coding	Rpl32	exon	ENSMUSG00000057841	ProperStrand	137	chr7	29136559	29136649	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	5	-6.6812
chr7	149170854	149171340	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	chr10	110918549	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	14	-inf
chr5	31503958	31503990	protein_coding	Zfp513	exon	ENSMUSG00000043059	ProperStrand	16	chr11	97642952	97642971	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	4	-15.8217
chr9	40611259	40611395	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr4	108278918	108278934	protein_coding	Orc1	exon	ENSMUSG00000028587	ProperStrand	161	1	-6.1817
chr11	116704533	116704549	protein_coding	Jmjd6	utr5	ENSMUSG00000056962	ProperStrand	92	chr2	26493390	26493485	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-2.9640
chr2	160785982	160786082	protein_coding	Chd6	exon	ENSMUSG00000057133	ProperStrand	104	chr7	150717298	150717375	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-4.4448
chr5	71487065	71487082	protein_coding	Gabra2	utr5	ENSMUSG00000000560	NonProperStrand	15	chr2	20683592	20683704	protein_coding	Etl4	intron	ENSMUSG00000036617	ProperStrand	86	5	-21.6740
chr3	67396497	67396537	protein_coding	Mfsd1	exon	ENSMUSG00000027775	ProperStrand	15	chr9	15119666	15119766	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	10	-inf
chr4	154931948	154931998	protein_coding	Gnb1	utr3	ENSMUSG00000029064	ProperStrand	69	chr7	118219575	118219673	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-3.9073
chr10	80809668	80809684	protein_coding	Hmg20b	exon	ENSMUSG00000020232	ProperStrand	157	chr19	8800355	8800419	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-1.8709
chr11	109344272	109344351	protein_coding	Arsg	intron	ENSMUSG00000020604	ProperStrand	3	chr10	23505190	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-6.9610
chr7	24984251	24984322	protein_coding	Zfp111	exon	ENSMUSG00000087598	ProperStrand	3	chr16	23110940	23110965	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-9.5778
chr13	9833549	9833648	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr3	153574602	153574649	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	1	-1.7193
chr4	122541854	122541903	protein_coding	Cap1	exon	ENSMUSG00000028656	ProperStrand	45	chr16	23110968	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-2.1851
chr1	192761515	192762991	protein_coding	Angel2	exon	ENSMUSG00000026634	ProperStrand	23	chr3	123210853	123210967	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	7	-19.7186
chr4	59771085	59771175	protein_coding	E130308A19Rik	utr3	ENSMUSG00000045071	ProperStrand	41	chr12	60141412	60141492	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-7.5887
chr8	58188506	58188596	LINE	Lx3_Mus	L1	chr8Lx3_Mus58187857	NonProperStrand	1	chr8	91151733	91151823	protein_coding	Snx20	intron	ENSMUSG00000031662	NonProperStrand	4	1	-inf
chr4	131908687	131908722	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	chr1	88248611	88248662	snoRNA	ENSMUSG00000064696_SNORD20	.	ENSMUSG00000064696	ProperStrand	89	2	-1.5304
chr9	108477719	108477817	protein_coding	Wdr6	exon	ENSMUSG00000066357	ProperStrand	30	chr1	162967514	162967563	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.7879
chr4	126130882	126131140	protein_coding	Eif2c1	exon	ENSMUSG00000041530	ProperStrand	30	chr1	162966007	162966040	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-4.9227
chr19	44369614	44372543	protein_coding	Scd2	exon	ENSMUSG00000025203	ProperStrand	219	chr7	150717316	150717416	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-3.0675
chr1	162968213	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	chr5	108336363	108336487	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	4	-1.3924
chr5	118376503	118376519	protein_coding	Nos1	exon	ENSMUSG00000029361	NonProperStrand	237	chr19	8799829	8799890	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-2.4266
chr15	81847580	81847610	protein_coding	Xrcc6	exon	ENSMUSG00000022471	ProperStrand	34	chr15	34370543	34370618	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-7.6950
chr10	80642372	80642476	protein_coding	Eef2	exon	ENSMUSG00000034994	NonProperStrand	20	chr13	56721511	56721533	protein_coding	Tgfbi	intron	ENSMUSG00000035493	ProperStrand	9	1	-18.8113
chr4	135729857	135729885	protein_coding	E2f2	intron	ENSMUSG00000018983	ProperStrand	3	chr11	94530109	94530758	protein_coding	Xylt2	exon	ENSMUSG00000020868	ProperStrand	65	1	-inf
chr1	45452974	45452990	protein_coding	Col5a2	exon	ENSMUSG00000026042	ProperStrand	184	chr7	52096722	52096738	protein_coding	Tbc1d17	exon	ENSMUSG00000038520	ProperStrand	20	1	-13.2926
chr1	34221275	34359802	protein_coding	Dst	exon	ENSMUSG00000026131	ProperStrand	461	chr14	76247712	76247811	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-1.7298
chr9	106331948	106331970	protein_coding	Rpl29	utr5	ENSMUSG00000048758	ProperStrand	45	chr7	117166835	117166860	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-6.7795
chr17	13112450	13112588	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	chr2	130101971	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	24	-13.0780
chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	chr13	96100596	96100731	protein_coding	Zbed3	intron	ENSMUSG00000041995	ProperStrand	33	1	-11.6830
chr2	119600735	119601079	protein_coding	Rpap1	exon	ENSMUSG00000034032	ProperStrand	96	chr17	36097663	36097764	protein_coding	Abcf1	exon	ENSMUSG00000038762	ProperStrand	206	1	-9.8955
chr12	3909904	3909994	protein_coding	Dnmt3a	utr3	ENSMUSG00000020661	ProperStrand	40	chr4	56910551	56910613	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-6.9111
chr13	29042548	29042582	protein_coding	Sox4	utr3	ENSMUSG00000076431	ProperStrand	73	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	11	-inf
chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	chr4	132850148	132850199	protein_coding	Wdtc1	exon	ENSMUSG00000037622	ProperStrand	81	1	-8.2284
chr9	78550959	78550977	protein_coding	Cd109	exon	ENSMUSG00000046186	NonProperStrand	36	chr2	130103753	130103808	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	3	-18.8678
chr7	17097798	17097814	protein_coding	Grlf1	exon	ENSMUSG00000058230	ProperStrand	38	chr11	62418029	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	NonProperStrand	7	1	-19.1577
chr9	65127126	65127142	protein_coding	Cilp	exon	ENSMUSG00000042254	ProperStrand	212	chr7	67123694	67123729	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	1	-7.0226
chr16	57391763	57391792	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr5	115939528	115939612	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	10	-inf
chr2	15043788	15043878	SINE	PB1D7	Alu	chr2PB1D715043814	ProperStrand	1	chr2	14597836	14597926	protein_coding	Cacnb2	intron	ENSMUSG00000057914	NonProperStrand	11	1	-inf
chr18	31490478	31490496	LINE	Lx3_Mus	L1	chr18Lx3_Mus31490416	ProperStrand	9	chr2	130102032	130102097	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-9.1946
chr10	61919367	61919457	protein_coding	Vps26a	utr3	ENSMUSG00000020078	ProperStrand	15	chr5	130300460	130300540	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-5.1031
chr15	34071475	34071565	protein_coding	Mtdh	utr3	ENSMUSG00000022255	ProperStrand	37	chr5	130300444	130300524	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.3697
chr7	129304105	129304157	protein_coding	Plk1	exon	ENSMUSG00000030867	ProperStrand	146	chr10	86242469	86242488	protein_coding	Nt5dc3	intron	ENSMUSG00000054027	ProperStrand	16	1	-14.2207
chr6	50299740	50299757	protein_coding	Osbpl3	intron	ENSMUSG00000029822	ProperStrand	34	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.3385
chr2	32075254	32075658	protein_coding	Prrc2b	exon	ENSMUSG00000039262	ProperStrand	344	chr5	74489618	74489679	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-0.9554
chr5	145532293	145532393	protein_coding	Trrap	intron	ENSMUSG00000045482	ProperStrand	399	chr4	116827120	116827155	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-3.3956
chr2	4913171	4913971	protein_coding	Mcm10	exon	ENSMUSG00000026669	ProperStrand	21	chr9	62225633	62225652	protein_coding	Anp32a	utr3	ENSMUSG00000032249	ProperStrand	75	1	-14.9945
chr11	68716803	68717916	protein_coding	Rpl26	exon	ENSMUSG00000060938	ProperStrand	130	chr10	110918636	110918694	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	4	-7.8835
chr7	3156090	3156288	protein_coding	AU018091	utr3	ENSMUSG00000054753	ProperStrand	42	chr17	24857746	24857836	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.9140
chr15	74825497	74825538	protein_coding	Ly6a	utr3	ENSMUSG00000075602	ProperStrand	1	chr14	76247801	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-inf
chr6	28468152	28468169	protein_coding	Snd1	intron	ENSMUSG00000001424	ProperStrand	210	chr17	35088969	35089021	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-3.4779
chr6	119303802	119303882	protein_coding	Adipor2	utr3	ENSMUSG00000030168	ProperStrand	79	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	5	-9.3538
chr4	155365822	155366552	protein_coding	B3galt6	exon	ENSMUSG00000050796	ProperStrand	40	chr19	8963027	8963185	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-7.6583
chr17	12585979	12585995	protein_coding	Plg	exon	ENSMUSG00000059481	ProperStrand	86	chr5	108336363	108336457	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-4.1928
mmu-miR-6240	5	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr19	42342839	42342857	protein_coding	Golga7b	exon	ENSMUSG00000042532	NonProperStrand	3	1	-12.2357
chr8	60015584	60016968	protein_coding	Galnt7	exon	ENSMUSG00000031608	ProperStrand	12	chr4	131908689	131908710	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.9639
chr4	56910496	56910618	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	chr17	35089181	35089233	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	10	-6.8465
chr12	119742269	119742359	LINE	L1Md_T	L1	chr12L1Md_T119742184	ProperStrand	1	chr5	30387224	30387314	protein_coding	Tyms	utr3	ENSMUSG00000025747	NonProperStrand	6	1	-inf
chr5	100976410	100976510	protein_coding	Cops4	utr3	ENSMUSG00000035297	ProperStrand	8	chr11	77995189	77995240	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-10.2911
chr9	64024792	64025801	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	chr2	26494708	26494802	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	3	-0.8159
chr12	110784490	110784567	lincRNA	Meg3	exon	ENSMUSG00000021268	ProperStrand	61	chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	2	-16.4074
chr6	134029351	134029368	protein_coding	Etv6	intron	ENSMUSG00000030199	ProperStrand	46	chr11	106362639	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-7.9355
chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	chr11	106362302	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-2.8044
chr6	142777350	142777367	protein_coding	St8sia1	utr3	ENSMUSG00000030283	ProperStrand	42	chr4	131865866	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.3470
chr11	6428032	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr17	35087890	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	19	-0.8206
chr16	57391633	57391675	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr3	96528187	96528303	snoRNA	ENSMUSG00000065669_SNORA5	.	ENSMUSG00000065669	NonProperStrand	1	1	-inf
chr9	72569122	72569169	protein_coding	Nedd4	exon	ENSMUSG00000032216	ProperStrand	308	chr5	135016842	135016858	protein_coding	Clip2	intron	ENSMUSG00000063146	ProperStrand	35	1	-11.1230
chr5	145532346	145532394	protein_coding	Trrap	intron	ENSMUSG00000045482	ProperStrand	399	chr11	46652571	46652592	protein_coding	Timd4	intron	ENSMUSG00000055546	ProperStrand	1	1	-inf
chr16	20683721	20683742	protein_coding	Eif4g1	intron	ENSMUSG00000045983	ProperStrand	199	chr17	35299513	35299642	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-2.5736
chr8	125626944	125626980	snoRNA	ENSMUSG00000064450_Snord68	.	ENSMUSG00000064450	ProperStrand	181	chr14	76247728	76247828	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-2.1975
chr2	90854674	90854690	protein_coding	Celf1	utr3	ENSMUSG00000005506	NonProperStrand	28	chr4	131908809	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.4067
chr8	97346704	97346794	protein_coding	Ciapin1	utr3	ENSMUSG00000031781	ProperStrand	24	chr16	23110911	23110993	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.3518
chr10	116376412	116376502	protein_coding	Rab3ip	exon	ENSMUSG00000064181	ProperStrand	18	chrX	34622928	34623008	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-5.4705
chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	chr1	89673627	89673717	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-1.8781
chr14	57116824	57116914	protein_coding	Rnf17	intron	ENSMUSG00000000365	ProperStrand	16	chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-10.5385
chr14	26675722	26689581	protein_coding	Anxa11	intron	ENSMUSG00000021866	ProperStrand	30	chr16	23110907	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-8.6578
chr15	84101747	84103941	protein_coding	Parvb	exon	ENSMUSG00000022438	ProperStrand	127	chr5	142459852	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	1	-9.1155
chr7	131732979	131732995	LINE	Lx4A	L1	chr7Lx4A131732484	ProperStrand	3	chr9	120039581	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-9.5119
chrX	72214248	72214264	protein_coding-noncoding	Gab3	utr3	ENSMUSG00000032750	ProperStrand	420	chr10	110918547	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-1.1764
chr1	183499385	183499402	LTR	IAPEY2_LTR	ERVK	chr1IAPEY2_LTR183499280	NonProperStrand	1	chr5	111204201	111204226	protein_coding	Pus1	exon	ENSMUSG00000029507	ProperStrand	10	1	-inf
chr9	121370408	121370482	protein_coding	Trak1	intron	ENSMUSG00000032536	ProperStrand	152	chr11	69481387	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-1.6420
chr13	13602619	13602666	protein_coding	Nid1	utr3	ENSMUSG00000005397	ProperStrand	112	chr14	76247752	76247774	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-3.0222
chrX	98758890	98758906	protein_coding	Taf1	exon	ENSMUSG00000031314	ProperStrand	61	chr4	131865867	131865889	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.7424
chr19	8800356	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	chr1	59761693	59761715	snoRNA	ENSMUSG00000089093_Snord11	.	ENSMUSG00000089093	ProperStrand	193	1	-1.5562
chr12	85385288	85385305	protein_coding	Acot4	utr3	ENSMUSG00000052392	ProperStrand	2	chr4	131908816	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-8.0336
chr11	35853330	35853348	protein_coding	Odz2	exon	ENSMUSG00000049336	NonProperStrand	43	chr7	116663713	116663759	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.0984
chr17	24858103	24858203	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr5	111121066	111121115	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-2.9646
chr14	31385395	31385442	protein_coding	Tkt	exon	ENSMUSG00000021957	ProperStrand	160	chr9	15118310	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-1.7875
chr3	65191728	65195258	protein_coding	Ssr3	exon	ENSMUSG00000027828	ProperStrand	24	chr11	51551280	51551380	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	1	-9.5455
chr19	32894838	32894873	protein_coding	Pten	utr3	ENSMUSG00000013663	ProperStrand	20	chr16	23111757	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-6.5355
chr4	24555744	24555763	protein_coding	Klhl32	intron	ENSMUSG00000040387	ProperStrand	67	chr9	64023268	64023329	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	1	-8.2244
chr8	13416896	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr9	108387885	108388000	protein_coding	Lamb2	exon	ENSMUSG00000052911	ProperStrand	35	7	-19.9660
chr9	70089134	70089151	protein_coding	Myo1e	intron	ENSMUSG00000032220	NonProperStrand	8	chr17	35089183	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-9.5771
chr9	108564611	108564627	protein_coding	Slc25a20	exon	ENSMUSG00000032602	ProperStrand	5	chr9	120038589	120038625	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-8.0049
chrX	157110542	157114569	protein_coding	Ppef1	exon	ENSMUSG00000062168	ProperStrand	4	chr4	116826716	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-12.4381
chr16	45627874	45627890	protein_coding	BC016579	utr3	ENSMUSG00000033187	ProperStrand	13	chr9	120039569	120039683	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-6.2868
chr2	119742944	119743000	protein_coding	Mga	exon	ENSMUSG00000033943	ProperStrand	180	chr9	15119296	15119396	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-3.0507
chr1	36988461	36988552	protein_coding	Tmem131	intron	ENSMUSG00000026116	ProperStrand	129	chr4	132530098	132530117	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	1	-8.0693
chrY	308014	308031	Other	RMER1A	Other	chrYRMER1A306919	ProperStrand	3	chr2	174171764	174171816	protein_coding	Gnas	utr3	ENSMUSG00000027523	ProperStrand	41	1	-inf
chr12	110888878	110888905	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr14	66017596	66017619	protein_coding	Zfp395	utr3	ENSMUSG00000034522	ProperStrand	15	1	-11.4819
chr11	87240292	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	chr5	130295432	130295514	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	5	-13.4031
chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr4	116828379	116828456	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	3	-0.7255
chr7	13516153	13516197	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr17	13112533	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	2	-1.5955
chr2	31494961	31494979	antisense	Gm13425	.	ENSMUSG00000085224	ProperStrand	1	chr18	75161533	75161585	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-inf
chr8	106943977	106943996	protein_coding	Dync1li2	utr3	ENSMUSG00000035770	ProperStrand	75	chr4	131908689	131908767	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-3.0634
chr2	31924012	31924028	protein_coding	Fam78a	utr3	ENSMUSG00000050592	NonProperStrand	340	chr17	24665436	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-1.8345
chr2	31332491	31334520	protein_coding	Ass1	exon	ENSMUSG00000076441	ProperStrand	29	chr4	131865885	131865965	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-7.7326
chr5	145532290	145532393	protein_coding	Trrap	intron	ENSMUSG00000045482	ProperStrand	399	chr19	8963027	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-0.7184
chr2	90235296	90235348	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr3	36507279	36507298	protein_coding	Bbs7	intron	ENSMUSG00000037325	ProperStrand	1	1	-inf
chr7	78305847	78305927	LINE	L1_Mus4	L1	chr7L1_Mus478305241	ProperStrand	1	chr11	37482168	37482258	lincRNA	Gm12128	exon	ENSMUSG00000087388	ProperStrand	1	1	-inf
chr2	90235304	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr18	62675172	62675189	protein_coding	Fbxo38	exon	ENSMUSG00000042211	NonProperStrand	1	1	-inf
chr8	64017611	64028377	protein_coding	Palld	exon	ENSMUSG00000058056	NonProperStrand	125	chr4	131908688	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-2.5723
chr16	13332970	13332987	protein_coding	Mkl2	utr3	ENSMUSG00000009569	ProperStrand	55	chr4	132925725	132925779	protein_coding	Slc9a1	utr5	ENSMUSG00000028854	ProperStrand	28	1	-15.0240
chr17	39985323	39985423	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr1	9932550	9932609	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-1.0542
chr2	124923795	124924238	protein_coding	Myef2	exon	ENSMUSG00000027201	ProperStrand	19	chr7	29136635	29136656	protein_coding	Rps16	intron	ENSMUSG00000037563	ProperStrand	191	1	-13.3238
chr5	86475546	86475579	protein_coding	Cenpc1	exon	ENSMUSG00000029253	ProperStrand	9	chr4	131865870	131865970	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.2544
chr16	45620182	45620198	protein_coding	Gcet2	exon	ENSMUSG00000022659	NonProperStrand	39	chr19	12053479	12058473	protein_coding	Osbp	exon	ENSMUSG00000024687	ProperStrand	19	1	-16.4463
chr14	87816802	87816819	protein_coding	Tdrd3	intron	ENSMUSG00000022019	ProperStrand	19	chr19	8963027	8963166	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.3710
chr3	152450531	152450580	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	chr19	8963032	8963048	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-5.6846
chr13	45096115	45096131	protein_coding	Dtnbp1	intron	ENSMUSG00000057531	ProperStrand	17	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.9909
chr7	31888561	31888577	protein_coding	Hpn	exon	ENSMUSG00000001249	NonProperStrand	20	chr16	23110893	23110911	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.6223
chr7	35216701	35216718	LINE	L1M4b	L1	chr7L1M4b35216550	ProperStrand	31	chr4	131865855	131865925	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.8751
chr9	35299916	35299941	protein_coding	Cdon	intron	ENSMUSG00000038119	ProperStrand	33	chr17	13112468	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	2	-9.3946
chr10	6063959	6063977	protein_coding	Akap12	intron	ENSMUSG00000038587	ProperStrand	1008	chr1	72896142	72896209	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	1	-3.9552
chr7	148634700	148634842	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	chr1	39605590	39605697	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	6	-2.0885
chr4	43505656	43505682	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr9	103258677	103258763	protein_coding	Cdv3	exon	ENSMUSG00000032803	ProperStrand	68	1	-2.8476
chr7	30231500	30231590	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	chr7	116664871	116664913	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	9	-4.3771
chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	chr12	41750740	41750758	protein_coding	Immp2l	intron	ENSMUSG00000056899	ProperStrand	21	1	-10.6269
chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr7	51505837	51505909	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	1	-2.0960
chr6	78763206	78763224	LTR	RMER20B	ERVK	chr6RMER20B78762903	NonProperStrand	4	chr7	117189932	117189982	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-8.8371
chr13	70384554	70384573	LTR	ORR1A2-int	MaLR	chr13ORR1A2-int70384496	ProperStrand	2	chr3	123210951	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-9.1566
chr11	102167170	102167200	protein_coding	Ubtf	utr3	ENSMUSG00000020923	ProperStrand	66	chr8	53422359	53422449	snRNA	ENSMUSG00000064682_U2	.	ENSMUSG00000064682	ProperStrand	55	1	-13.2979
chr9	65044377	65044451	snRNA	ENSMUSG00000075763_U5	.	ENSMUSG00000075763	ProperStrand	216	chr18	35102314	35102353	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-4.1082
chr7	19591412	19591429	protein_coding	Irf2bp1	exon	ENSMUSG00000044030	NonProperStrand	81	chr8	32260335	32260426	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	3	-9.8554
chr9	70960075	70960092	protein_coding	Aqp9	exon	ENSMUSG00000032204	NonProperStrand	118	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-5.6502
chr9	106332650	106333436	protein_coding	Rpl29	exon	ENSMUSG00000048758	ProperStrand	45	chr3	123210853	123210933	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.5489
chr9	55994335	55994394	protein_coding	Tspan3	exon	ENSMUSG00000032324	ProperStrand	10	chr16	23111694	23111784	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.2069
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chrX	93136011	93136027	protein_coding	Las1l	exon	ENSMUSG00000057421	ProperStrand	248	1	-5.7827
chr2	105012751	105012769	protein_coding	Wt1	utr3	ENSMUSG00000016458	NonProperStrand	338	chr8	73419656	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	7	-7.3027
chr1	162142842	162142905	protein_coding	Cacybp	utr5	ENSMUSG00000014226	ProperStrand	39	chr18	35716720	35716810	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.9102
chr16	11753769	11753786	protein_coding	Snx29	intron	ENSMUSG00000071669	NonProperStrand	38	chr6	71832632	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-6.5128
chr3	96132439	96132514	snRNA	ENSMUSG00000075978_U1	.	ENSMUSG00000075978	ProperStrand	132	chr2	158182156	158182256	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-3.5121
chr16	22383341	22383572	protein_coding	Etv5	utr3	ENSMUSG00000013089	ProperStrand	88	chr18	35716707	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-6.3874
chr19	59534008	59534026	protein_coding	Emx2	exon	ENSMUSG00000043969	NonProperStrand	87	chr14	21211247	21211293	protein_coding	Mrps16	exon	ENSMUSG00000049960	ProperStrand	2	1	-20.1717
chr7	52822293	52822363	protein_coding	Hsd17b14	utr3	ENSMUSG00000030825	ProperStrand	4	chr17	35087941	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	3	-inf
chr7	19935606	19936050	protein_coding	Ercc1	exon	ENSMUSG00000003549	NonProperStrand	35	chrX	53609291	53609309	protein_coding	Zfp449	intron	ENSMUSG00000073176	NonProperStrand	7	1	-19.0433
chr3	157679320	157679410	protein_coding	Srsf11	exon	ENSMUSG00000055436	ProperStrand	46	chr11	69481395	69481475	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.6886
chr13	49005694	49005794	protein_coding	Fam120a	exon	ENSMUSG00000038014	ProperStrand	76	chr6	117874465	117874508	protein_coding	Hnrnpf	exon	ENSMUSG00000042079	ProperStrand	147	1	-11.0394
chr15	33152234	33152265	protein_coding	Pgcp	intron	ENSMUSG00000039007	ProperStrand	9	chr7	118219575	118219641	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	4	-19.1131
chr11	113730275	113731050	protein_coding	Sdk2	exon	ENSMUSG00000041592	NonProperStrand	98	chr14	76247741	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	3	-8.1962
chr4	136099342	136099422	protein_coding	Luzp1	exon	ENSMUSG00000001089	ProperStrand	35	chr8	69228390	69228406	protein_coding	Npy1r	exon	ENSMUSG00000036437	ProperStrand	13	1	-17.5535
mmu-miR-291a-3p	0	22	miRNA	mmu-miR-291a-3p	.	mmu-miR-291a-3p	ProperStrand	19	chr16	23110897	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7016
chr4	83939441	83939457	protein_coding	Bnc2	exon	ENSMUSG00000028487	ProperStrand	76	chr3	123210911	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.6934
chr8	27062446	27062463	protein_coding	Hgsnat	exon	ENSMUSG00000037260	ProperStrand	41	chr2	32818887	32818937	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-6.2201
chr15	82725599	82725635	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	chr4	108673531	108673631	protein_coding	Nrd1	exon	ENSMUSG00000053510	ProperStrand	76	1	-8.0495
chr15	102495573	102495646	protein_coding	Atp5g2	exon	ENSMUSG00000062683	ProperStrand	32	chr16	23111447	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.2238
chr9	21602970	21602986	protein_coding	Kank2	utr5	ENSMUSG00000032194	ProperStrand	196	chr6	4707724	4707761	protein_coding	Peg10	utr3	ENSMUSG00000092035	ProperStrand	102	1	-9.8735
chr16	18406255	18406278	protein_coding	Arvcf	utr3	ENSMUSG00000000325	ProperStrand	28	chr17	35087894	35087948	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-6.7052
chr14	77424372	77424388	protein_coding	9030625A04Rik	utr3	ENSMUSG00000044350	NonProperStrand	152	chr11	48614363	48614434	snoRNA	ENSMUSG00000064500_SNORD95	.	ENSMUSG00000064500	ProperStrand	100	1	-10.4217
chr15	79942340	79942430	protein_coding	Syngr1	intron	ENSMUSG00000022415	NonProperStrand	3	chr4	116854860	116854940	protein_coding	Kif2c	intron	ENSMUSG00000028678	NonProperStrand	2	1	-inf
chr1	162965975	162966007	non_coding	Gas5	.	ENSMUSG00000053332	ProperStrand	144	chr4	131865381	131865471	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	2	-4.2861
chr7	51505822	51505902	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	chr8	73419683	73419774	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	12	-9.6471
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr8	98288919	98288950	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	1	-5.5102
chr14	21188276	21188376	protein_coding	Fam149b	intron	ENSMUSG00000039599	ProperStrand	6	chr3	123210879	123210933	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-6.4760
chr19	43269721	43269737	protein_coding	Hpse2	intron	ENSMUSG00000074852	NonProperStrand	48	chr16	23111689	23111712	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.2671
chr1	169167499	169167579	protein_coding	Uck2	intron	ENSMUSG00000026558	ProperStrand	45	chr1	34870801	34870891	protein_coding	Fam168b	utr3	ENSMUSG00000037503	ProperStrand	23	1	-15.8211
chr8	86619855	86619945	protein_coding	Rfx1	utr3	ENSMUSG00000031706	ProperStrand	20	chr7	116663656	116663736	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.5385
chr16	23110825	23110851	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	1	-2.9303
chr2	144087452	144087491	protein_coding	Snx5	intron	ENSMUSG00000027423	ProperStrand	64	chr18	35716704	35716761	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.0639
chr12	112352309	112352376	protein_coding	Rcor1	utr3	ENSMUSG00000037896	ProperStrand	20	chr3	108357623	108357662	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	3	-15.3701
chr6	39366855	39366907	protein_coding	Mkrn1	intron	ENSMUSG00000029922	ProperStrand	177	chr17	24857802	24857847	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	3	-2.5866
chr1	5753523	5753541	LTR	MTD	MaLR	chr1MTD5753482	NonProperStrand	1	chr19	8799830	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-inf
chr5	75473198	75473215	protein_coding	Gsx2	utr3	ENSMUSG00000035946	ProperStrand	307	chr11	77996588	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-3.0003
chr4	53558636	53566412	protein_coding	Slc44a1	exon	ENSMUSG00000028412	ProperStrand	38	chr10	23505152	23505218	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-5.3708
chr15	77597977	77597993	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr1	93320500	93320517	protein_coding	Per2	exon	ENSMUSG00000055866	NonProperStrand	44	1	-9.4313
chr3	142455374	142455450	protein_coding	Pkn2	utr3	ENSMUSG00000004591	ProperStrand	28	chr1	58811593	58811664	protein_coding	Cflar	utr3	ENSMUSG00000026031	ProperStrand	10	8	-19.3459
chr14	32547965	32547988	protein_coding	Ankrd28	intron	ENSMUSG00000014496	ProperStrand	39	chr2	26494708	26494791	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-6.5883
chr2	160588120	160588141	protein_coding	Plcg1	utr3	ENSMUSG00000016933	ProperStrand	65	chr9	121823892	121823908	protein_coding	Cyp8b1	exon	ENSMUSG00000050445	NonProperStrand	101	1	-12.1064
chr9	78046175	78047304	protein_coding	Gsta4	exon	ENSMUSG00000032348	ProperStrand	82	chr4	131908809	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.8304
chr17	24342578	24342599	protein_coding	Ntn3	utr3	ENSMUSG00000079662	ProperStrand	237	chr3	68889030	68889130	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-1.0649
chr6	46285746	46285765	protein_coding	Cntnap2	intron	ENSMUSG00000039419	ProperStrand	21	chr4	131865855	131865904	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.5891
chr2	25563070	25563086	antisense	A230005M16Rik	.	ENSMUSG00000087612	ProperStrand	103	chr10	80641632	80641888	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-5.0439
chr6	71781371	71781391	protein_coding	Immt	utr5	ENSMUSG00000052337	ProperStrand	48	chr18	35716684	35716760	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.5460
chr8	109173070	109177413	protein_coding	Cdh1	exon	ENSMUSG00000000303	ProperStrand	283	chr1	9932549	9932595	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-4.6882
chr8	129468746	129468879	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	chr1	145626057	145626198	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	3	-2.6237
chr10	59355761	59356990	protein_coding	Dnajb12	exon	ENSMUSG00000020109	ProperStrand	27	chr5	121655032	121655100	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.2800
chr4	136158464	136158500	protein_coding	Kdm1a	exon	ENSMUSG00000036940	ProperStrand	83	chr15	5068430	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-5.4311
chr12	100626727	100626743	protein_coding	Foxn3	exon	ENSMUSG00000033713	ProperStrand	74	chr15	38008367	38008385	protein_coding	Ubr5	utr5	ENSMUSG00000037487	ProperStrand	258	1	-9.9679
chr7	52560178	52560194	protein_coding	Trpm4	utr3	ENSMUSG00000038260	ProperStrand	161	chr19	8963129	8963181	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-0.8479
chr18	73693106	73693137	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr16	56035865	56035989	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	5	-8.4726
chr9	21420520	21420620	Simple_repeat	(CGGG)n	Simple_repeat	chr9(CGGG)n21420534	NonProperStrand	1	chr9	21420685	21420739	protein_coding	Smarca4	utr5	ENSMUSG00000032187	NonProperStrand	1	1	-inf
chr17	45562879	45562907	protein_coding	Cdc5l	exon	ENSMUSG00000023932	ProperStrand	59	chr5	143666297	143666333	protein_coding	Actb	exon	ENSMUSG00000029580	ProperStrand	446	1	-9.3303
chr1	154963894	154963912	protein_coding	Nmnat2	utr3	ENSMUSG00000042751	ProperStrand	39	chr4	131865856	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.4732
chr15	98772434	98772524	SINE	B2_Mm2	B2	chr15B2_Mm298772350	ProperStrand	1	chr5	77775143	77775233	protein_coding	Polr2b	intron	ENSMUSG00000029250	NonProperStrand	2	1	-inf
chr19	8976780	8977013	protein_coding	Ganab	exon	ENSMUSG00000071650	ProperStrand	145	chr11	6428077	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.7064
chr10	110918559	110918650	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	chr12	81492707	81492738	snoRNA	ENSMUSG00000088158_Scarna3b	.	ENSMUSG00000088158	ProperStrand	147	1	-1.9047
chr2	26493473	26493498	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chrX	147060718	147060826	protein_coding	Pfkfb1	intron	ENSMUSG00000025271	ProperStrand	5	1	-11.3307
chr18	16933117	16966848	protein_coding	Cdh2	exon	ENSMUSG00000024304	ProperStrand	71	chr3	65332419	65332533	protein_coding	Tiparp	utr5	ENSMUSG00000034640	ProperStrand	14	2	-inf
chr6	67231720	67231811	protein_coding	Serbp1	exon	ENSMUSG00000036371	ProperStrand	261	chr1	72272872	72272952	snRNA	ENSMUSG00000075752_U2	.	ENSMUSG00000075752	ProperStrand	535	6	-inf
chr3	66100724	66100740	protein_coding	Veph1	utr5	ENSMUSG00000027831	NonProperStrand	92	chr4	131908356	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.8590
chr8	112055599	112055615	protein_coding	Pmfbp1	exon	ENSMUSG00000031727	ProperStrand	4	chr11	62416621	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-10.7841
chr14	55126162	55126210	protein_coding	Prmt5	utr3	ENSMUSG00000023110	ProperStrand	72	chr1	162968226	162968289	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	3	-14.7283
chr9	62643392	62643482	protein_coding	Fem1b	utr3	ENSMUSG00000032244	ProperStrand	111	chr17	13112504	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	2	-5.8361
chr10	120508070	120508086	protein_coding	Wif1	intron	ENSMUSG00000020218	ProperStrand	3	chr5	116031886	116032336	protein_coding	Gcn1l1	exon	ENSMUSG00000041638	ProperStrand	408	1	-15.8268
mmu-miR-6238	1	18	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr2	26494708	26494728	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-0.9452
mmu-miR-6238	1	19	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr4	43505813	43505903	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	1	-0.9204
chr18	36950181	36950301	protein_coding	Hars2	intron	ENSMUSG00000019143	ProperStrand	8	chr5	65952377	65952395	protein_coding	Ube2k	intron	ENSMUSG00000029203	ProperStrand	289	4	-19.0237
chr14	97529141	97529160	LTR	ORR1D1	MaLR	chr14ORR1D197528936	ProperStrand	1	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	NonProperStrand	91	1	-inf
chr4	62021552	62021568	protein_coding	Fkbp15	utr5	ENSMUSG00000066151	NonProperStrand	3	chr12	112779226	112779272	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-11.0699
chr10	53260874	53261344	protein_coding	Mcm9	exon	ENSMUSG00000058298	NonProperStrand	16	chr16	23111386	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-8.8328
mmu-miR-6240	4	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr13	39052372	39052388	protein_coding	Slc35b3	utr5	ENSMUSG00000021432	ProperStrand	27	1	-7.4937
chr4	144811060	144811140	protein_coding	Tnfrsf1b	intron	ENSMUSG00000028599	ProperStrand	13	chr4	141487941	141488031	protein_coding	Fhad1	intron	ENSMUSG00000051435	NonProperStrand	8	1	-19.3777
chr12	112532306	112532408	protein_coding	Cdc42bpb	utr3	ENSMUSG00000021279	ProperStrand	128	chr15	79913288	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.2557
chr8	28347837	28347902	LTR	ORR1B1	MaLR	chr8ORR1B128347700	ProperStrand	1	chr17	35087926	35087962	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-inf
chr5	118376503	118376519	protein_coding	Nos1	exon	ENSMUSG00000029361	NonProperStrand	237	chr7	116663712	116663746	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-1.2510
chr9	57438182	57438198	protein_coding	Ulk3	exon	ENSMUSG00000032308	ProperStrand	9	chr14	76247711	76247777	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-7.9615
chr10	126967997	126968018	protein_coding	Nxph4	intron	ENSMUSG00000040258	ProperStrand	8	chr17	35299521	35299642	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-8.8452
chr10	128270464	128276891	protein_coding	Sarnp	exon	ENSMUSG00000078427	ProperStrand	9	chr10	23505152	23505215	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-19.5229
chr18	36591996	36592029	protein_coding	Pfdn1	exon	ENSMUSG00000024346	ProperStrand	12	chr11	57865146	57865204	protein_coding	Larp1	exon	ENSMUSG00000037331	ProperStrand	201	1	-14.1736
chr7	86050842	86050864	protein_coding	Aen	exon	ENSMUSG00000030609	ProperStrand	17	chr7	148634702	148634839	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-10.5126
chr17	80680687	80680703	protein_coding	Dhx57	exon	ENSMUSG00000035051	ProperStrand	20	chr17	24342579	24342596	protein_coding	Ntn3	utr3	ENSMUSG00000079662	ProperStrand	237	1	-12.7859
chr9	108481530	108481630	protein_coding	P4htm	exon	ENSMUSG00000006675	ProperStrand	2	chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	1	-16.2178
chr18	24271175	24271215	protein_coding	Ino80c	exon	ENSMUSG00000047989	ProperStrand	5	chr18	35102297	35102352	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-11.7328
chr13	75905625	75905651	protein_coding	Ell2	intron	ENSMUSG00000001542	ProperStrand	110	chr7	3657429	3657477	protein_coding	Rps9	exon	ENSMUSG00000006333	ProperStrand	87	1	-11.3492
chr5	145532313	145532394	protein_coding	Trrap	intron	ENSMUSG00000045482	ProperStrand	399	chr7	148634704	148634808	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-1.8217
chr2	129034816	129037248	protein_coding	Slc20a1	utr3	ENSMUSG00000027397	ProperStrand	81	chr19	8800355	8800447	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-5.1617
chr7	26472435	26472451	protein_coding	Tgfb1	utr5	ENSMUSG00000002603	NonProperStrand	154	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-4.0283
chr6	127928449	127928470	protein_coding	Tspan9	intron	ENSMUSG00000030352	NonProperStrand	7	chr9	64024930	64024998	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	1	-13.5662
chr6	91436903	91436920	protein_coding	Tmem43	exon	ENSMUSG00000030095	ProperStrand	14	chr8	32260335	32260424	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-7.5228
chr14	56159297	56159314	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	chr2	26493365	26493500	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-1.7062
chr15	5067690	5068570	protein_coding	Rpl37	exon	ENSMUSG00000041841	ProperStrand	69	chr19	8800355	8800449	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-3.2742
chr16	36071984	36072000	protein_coding	Ccdc58	utr5	ENSMUSG00000075229	NonProperStrand	55	chr16	56035948	56036001	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	1	-9.1199
chr11	116408277	116410111	protein_coding	Ube2o	exon	ENSMUSG00000020802	ProperStrand	134	chr19	8895007	8895083	protein_coding	Hnrnpul2	exon	ENSMUSG00000071659	ProperStrand	93	5	-19.9806
chr14	93575981	93575998	protein_coding	Pcdh9	intron	ENSMUSG00000055421	ProperStrand	59	chr11	106362640	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-7.4380
chr4	115762096	115762157	protein_coding	Lrrc41	exon	ENSMUSG00000028703	ProperStrand	16	chr10	80641508	80641554	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	3	-19.3047
chr8	77742558	77742574	protein_coding	Rasd2	exon	ENSMUSG00000034472	NonProperStrand	237	chr2	131005139	131005190	protein_coding	Cenpb	exon	ENSMUSG00000068267	ProperStrand	26	1	-12.2504
chr7	13615234	13615334	protein_coding	Trim28	exon	ENSMUSG00000005566	ProperStrand	296	chr1	162967493	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-0.9375
chr13	9833553	9833652	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr14	56452246	56452277	protein_coding	Nfatc4	utr3	ENSMUSG00000023411	ProperStrand	16	1	-7.5851
chr3	137849424	137849440	protein_coding	4930579F01Rik	utr5	ENSMUSG00000012042	NonProperStrand	156	chr5	145726509	145726578	protein_coding	Smurf1	utr5	ENSMUSG00000038780	ProperStrand	45	2	-18.6630
chr8	96535868	96535890	protein_coding	Amfr	intron	ENSMUSG00000031751	ProperStrand	26	chr3	123210867	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.5360
chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr1	162968219	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	2	-1.6605
chr5	125908732	125908767	protein_coding	Dhx37	exon	ENSMUSG00000029480	ProperStrand	15	chr4	57706987	57707003	protein_coding	Palm2	intron	ENSMUSG00000090053	NonProperStrand	187	1	-13.8584
chr7	134911606	134911635	protein_coding	Fbxl19	utr3	ENSMUSG00000030811	ProperStrand	15	chrX	152009278	152009294	protein_coding	Ptchd1	exon	ENSMUSG00000041552	NonProperStrand	294	1	-12.9475
chr5	122916042	122916880	protein_coding	Atp2a2	exon	ENSMUSG00000029467	ProperStrand	166	chr16	23110468	23110548	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-0.9437
chr6	124791245	124791261	protein_coding	Leprel2	utr3	ENSMUSG00000023191	ProperStrand	44	chr12	17552966	17553032	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-5.6952
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr11	78098950	78098998	protein_coding	2610507B11Rik	exon	ENSMUSG00000010277	ProperStrand	246	1	-2.3705
chr11	35630818	35630870	protein_coding	Rars	intron	ENSMUSG00000018848	ProperStrand	18	chr11	114754613	114754630	protein_coding	Cd300a	exon	ENSMUSG00000034652	ProperStrand	7	2	-inf
chr5	31783590	31783626	protein_coding	Zfp512	utr3	ENSMUSG00000062761	ProperStrand	44	chr7	148634702	148634792	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	3	-10.9567
chr18	42381205	42381295	protein_coding	Lars	exon	ENSMUSG00000024493	ProperStrand	69	chr12	17552950	17553030	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-4.8190
chr9	102524606	102524666	protein_coding	Cep63	intron	ENSMUSG00000032534	ProperStrand	23	chr17	35089182	35089254	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	2	-11.8985
chr10	36708174	36708194	protein_coding	Hdac2	intron	ENSMUSG00000019777	NonProperStrand	3	chr9	15119645	15119766	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-14.7459
chr13	3885978	3886011	protein_coding	Net1	exon	ENSMUSG00000021215	ProperStrand	32	chr18	35714145	35714235	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-7.7075
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr2	138188029	138188045	protein_coding	Btbd3	intron	ENSMUSG00000062098	NonProperStrand	121	1	-9.0221
chr10	109640049	109640066	SINE	RSINE1	B4	chr10RSINE1109639979	ProperStrand	51	chr3	123210915	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.3354
chr10	62269805	62342731	protein_coding	Tet1	utr3	ENSMUSG00000047146	ProperStrand	286	chr16	23110873	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	12	-0.9308
chr15	83207892	83207972	protein_coding	Pacsin2	utr3	ENSMUSG00000016664	ProperStrand	30	chr1	36749019	36749109	protein_coding	Cox5b	intron	ENSMUSG00000061518	ProperStrand	43	1	-15.3999
chr4	131865383	131865503	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	chr15	5068407	5068482	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	11	-2.3077
chr4	28814830	28814848	protein_coding	Epha7	intron	ENSMUSG00000028289	NonProperStrand	3	chr7	29136525	29136556	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-8.4253
chr6	108599570	108599588	lincRNA	0610040F04Rik	intron	ENSMUSG00000087341	ProperStrand	13	chr4	131908839	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.8088
chr11	52202099	52202129	protein_coding	Vdac1	utr3	ENSMUSG00000020402	ProperStrand	107	chr9	26783004	26783055	protein_coding	Acad8	utr3	ENSMUSG00000031969	ProperStrand	4	1	-17.9275
chr5	131710559	131710649	protein_coding	Wbscr17	intron	ENSMUSG00000034040	ProperStrand	13	chr15	6280578	6280668	protein_coding	Dab2	intron	ENSMUSG00000079102	NonProperStrand	1	1	-inf
chr17	12403919	12403964	protein_coding	Agpat4	intron	ENSMUSG00000023827	ProperStrand	15	chr14	76247806	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-6.9035
chr10	80644976	80645043	protein_coding	Eef2	utr3	ENSMUSG00000034994	ProperStrand	2244	chr2	32086752	32086768	protein_coding	Prrc2b	utr3	ENSMUSG00000039262	ProperStrand	344	1	-2.8062
chrX	71589886	71589908	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr11	69481335	69481461	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-1.5980
chr10	79595464	79595523	protein_coding-noncoding	Dos	utr3	ENSMUSG00000035640	ProperStrand	13	chr4	131866150	131866240	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-6.6596
chr14	22490090	22490133	protein_coding	Myst4	utr3	ENSMUSG00000021767	ProperStrand	151	chr14	35550461	35550561	protein_coding	Wapal	exon	ENSMUSG00000041408	ProperStrand	93	1	-10.5803
chr9	65049531	65049595	snRNA	ENSMUSG00000075930_U5	.	ENSMUSG00000075930	ProperStrand	175	chr18	33954840	33954930	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-1.6827
chr2	90235290	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr18	35714147	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	25	-0.9321
chr4	137172579	137172669	protein_coding	Usp48	intron	ENSMUSG00000043411	ProperStrand	135	chr4	56910504	56910584	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	7	-inf
chrX	132335229	132335306	protein_coding	Gprasp1	exon	ENSMUSG00000043384	ProperStrand	57	chr11	97642952	97642969	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-4.5062
chr2	130109497	130109513	protein_coding	Idh3b	exon	ENSMUSG00000027406	ProperStrand	146	chr7	87537189	87537239	protein_coding	Furin	exon	ENSMUSG00000030530	ProperStrand	22	1	-13.5635
chr1	91371602	91371702	protein_coding	Agap1	intron	ENSMUSG00000055013	ProperStrand	229	chr11	68886998	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	2	-3.2844
chr12	70259733	70260052	protein_coding	Rps29	utr5	ENSMUSG00000034892	ProperStrand	124	chr1	162968260	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-5.3899
chr8	73872481	73872547	protein_coding	Myo9b	exon	ENSMUSG00000004677	ProperStrand	78	chr9	63868722	63868739	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	3	-17.9758
chr4	116781299	116781485	protein_coding	Ptch2	exon	ENSMUSG00000028681	ProperStrand	14	chr6	51538297	51538377	protein_coding	Snx10	exon	ENSMUSG00000038301	ProperStrand	9	1	-inf
chr15	100311922	100311938	protein_coding	Csrnp2	utr3	ENSMUSG00000044636	NonProperStrand	60	chr16	23111373	23111415	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.2589
chr7	20020245	20022288	protein_coding	Mark4	exon	ENSMUSG00000030397	ProperStrand	18	chr18	63109676	63109692	protein_coding	Apcdd1	exon	ENSMUSG00000071847	NonProperStrand	254	1	-12.8638
chr5	122922959	122922984	protein_coding	Atp2a2	intron	ENSMUSG00000029467	ProperStrand	166	chr5	130295414	130295523	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-3.3263
chr13	120253418	120253434	protein_coding	4833420G17Rik	intron	ENSMUSG00000062822	ProperStrand	49	chr4	131865929	131865973	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.0906
chr11	23181451	23181486	protein_coding	Xpo1	intron	ENSMUSG00000020290	ProperStrand	123	chr1	162967518	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-2.2154
chr3	159502831	159502850	protein_coding	Wls	utr5	ENSMUSG00000028173	NonProperStrand	35	chr9	72515450	72515539	protein_coding	Nedd4	intron	ENSMUSG00000032216	ProperStrand	308	3	-21.0603
chr10	62802344	62802360	protein_coding	Sirt1	intron	ENSMUSG00000020063	NonProperStrand	116	chr17	28465976	28466323	protein_coding	Rpl10a	exon	ENSMUSG00000037805	ProperStrand	121	1	-10.5808
chr4	41239615	41239659	protein_coding	Dcaf12	utr3	ENSMUSG00000028436	ProperStrand	33	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-10.1839
chr8	67609695	67609712	SINE	B3A	B2	chr8B3A67609670	ProperStrand	1	chr5	23031348	23031364	protein_coding	Srpk2	exon	ENSMUSG00000062604	ProperStrand	51	1	-inf
chr17	8489327	8489427	protein_coding-noncoding	Brp44l	utr5	ENSMUSG00000023861	ProperStrand	11	chr5	130300493	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	11	-inf
chr5	143139075	143140303	protein_coding	Wipi2	exon	ENSMUSG00000029578	ProperStrand	49	chr2	26493427	26493449	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-4.1229
chr2	72319857	72319937	protein_coding	Cdca7	exon	ENSMUSG00000055612	ProperStrand	22	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.0882
chr1	141375038	141375099	protein_coding	Aspm	exon	ENSMUSG00000033952	ProperStrand	64	chr18	75160711	75160776	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	5	-18.9228
chr16	91507513	91507534	protein_coding	Ifnar1	utr3	ENSMUSG00000022967	ProperStrand	13	chr11	69483136	69483216	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-8.8334
chr1	51535009	51535089	protein_coding	Obfc2a	utr5	ENSMUSG00000026107	ProperStrand	9	chr9	15119668	15119758	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-6.2797
chr7	13516168	13516208	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr7	106631294	106631409	snoRNA	ENSMUSG00000065822_Snord15a	.	ENSMUSG00000065822	ProperStrand	128	1	-7.1563
chr2	165909889	165909936	protein_coding	Sulf2	exon	ENSMUSG00000006800	ProperStrand	171	chr17	24665421	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	2	-5.1545
chr3	69838263	69838282	LINE	Lx7	L1	chr3Lx769836606	ProperStrand	1	chr1	173347812	173347857	protein_coding	Usf1	exon	ENSMUSG00000026641	ProperStrand	30	1	-inf
chr7	54110648	54110738	protein_coding	Ldha	utr3	ENSMUSG00000063229	ProperStrand	280	chr5	74489596	74489676	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-1.2201
chr5	143874599	143874615	protein_coding	Rnf216	utr5	ENSMUSG00000045078	NonProperStrand	29	chr1	162965994	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-8.2579
chr10	127522531	127522621	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr10	23505541	23505621	protein_coding	Rps12	intron	ENSMUSG00000061983	ProperStrand	309	1	-5.4266
chr10	121187426	121187443	protein_coding	BC048403	exon	ENSMUSG00000053684	NonProperStrand	7	chr8	98270014	98270083	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-9.9218
chr8	87223594	87223612	protein_coding	Trmt1	exon	ENSMUSG00000001909	NonProperStrand	60	chr17	45706455	45706567	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	1	-6.7300
chr11	21472840	21472886	protein_coding	Wdpcp	intron	ENSMUSG00000020319	ProperStrand	9	chr19	44188402	44188492	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	2	-18.1803
chr14	65695145	65695215	protein_coding	Extl3	exon	ENSMUSG00000021978	ProperStrand	36	chr9	110544350	110544366	protein_coding	Nbeal2	exon	ENSMUSG00000056724	ProperStrand	161	1	-12.3650
chr9	78023151	78023199	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr11	80415108	80415125	protein_coding	Myo1d	exon	ENSMUSG00000035441	ProperStrand	144	1	-4.1885
chr4	142934614	142934630	LTR	MLT1F2	MaLR	chr4MLT1F2142934430	ProperStrand	6	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-7.8657
chr8	44381547	44386039	protein_coding	Zfp42	utr5	ENSMUSG00000051176	ProperStrand	127	chr11	97642952	97643071	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	8	-13.7521
chr2	89368462	89368480	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	chr16	23110456	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	4	-2.7572
chr15	32889869	32889886	protein_coding	Sdc2	intron	ENSMUSG00000022261	NonProperStrand	3	chr1	162966812	162966839	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-12.5998
chr14	76247724	76247750	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	chr1	9932550	9932614	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	7	-4.3088
chrX	132607190	132607290	protein_coding	Nxf3	utr3	ENSMUSG00000057000	ProperStrand	1	chr19	8799844	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-inf
chr4	133235415	133263241	protein_coding	Arid1a	intron	ENSMUSG00000007880	ProperStrand	465	chr4	131865867	131865976	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	12	-5.0921
chr2	90235294	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	95136391	95136424	protein_coding	Myst2	utr3	ENSMUSG00000038909	ProperStrand	56	1	-4.5948
chr17	34808913	34808930	protein_coding	Tnxb	exon	ENSMUSG00000033327	ProperStrand	36	chr15	80045088	80045114	protein_coding	Mgat3	utr3	ENSMUSG00000042428	ProperStrand	14	1	-17.4878
chr7	52713341	52713955	protein_coding	Ftl1	exon	ENSMUSG00000050708	ProperStrand	807	chr10	23506278	23506348	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	4	-7.8264
chr11	69481334	69481445	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	chr2	166890780	166890859	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	6	-7.5391
chr2	91436228	91436335	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	chr5	125884616	125884655	tRNA	tRNA1317-AlaTGC	.	1669442	ProperStrand	149	1	-5.7014
chr9	64919067	64919157	protein_coding	Dpp8	intron	ENSMUSG00000032393	NonProperStrand	1	chr5	108336937	108337017	protein_coding	Rpl5	utr3	ENSMUSG00000058558	ProperStrand	235	1	-inf
chr12	85944281	85944920	protein_coding	Abcd4	exon	ENSMUSG00000021240	ProperStrand	6	chr16	23110966	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.7876
chr1	132363601	132363617	lincRNA	Gm16083	intron	ENSMUSG00000085526	ProperStrand	2	chr7	117166793	117166859	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	2	-inf
chr1	191058375	191058393	protein_coding	Kcnk2	intron	ENSMUSG00000037624	ProperStrand	56	chr9	63042015	63042031	protein_coding	Map2k5	exon	ENSMUSG00000058444	ProperStrand	193	1	-11.1088
chr19	6395311	6395381	protein_coding	Pygm	intron	ENSMUSG00000032648	NonProperStrand	2	chr3	108189501	108189555	protein_coding	Psrc1	exon	ENSMUSG00000068744	ProperStrand	38	1	-inf
chr8	64017614	64028377	protein_coding	Palld	exon	ENSMUSG00000058056	NonProperStrand	125	chr1	162966000	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-2.3051
chr4	131908216	131908968	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr4	131908686	131908900	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	68	-20.7503
chr1	63225257	63225322	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	chr15	79908939	79909019	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	2	-2.7886
chr4	128867196	128867212	protein_coding	Yars	exon	ENSMUSG00000028811	ProperStrand	131	chr19	8800421	8800439	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-2.1616
chr3	94681905	94682131	protein_coding	Pogz	exon	ENSMUSG00000038902	ProperStrand	65	chr17	35089182	35089233	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-5.3290
chr16	16924969	16925085	protein_coding	Ppm1f	utr3	ENSMUSG00000026181	ProperStrand	37	chr1	59539683	59539700	protein_coding	Fzd7	utr5	ENSMUSG00000041075	ProperStrand	373	1	-10.6275
chr6	3794653	3794670	SINE	B4A	B4	chr6B4A3794525	NonProperStrand	26	chr7	117189944	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.9171
chr5	31364936	31369091	protein_coding	Cad	exon	ENSMUSG00000013629	ProperStrand	260	chr4	131866238	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-1.2378
chr13	9833580	9833620	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr14	52525762	52525832	protein_coding	Ndrg2	utr3	ENSMUSG00000004558	ProperStrand	10	1	-8.5576
chr12	111930486	111930551	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	1	-4.5139
chr14	51427238	51427286	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr15	77356785	77356801	protein_coding	Apol7c	exon	ENSMUSG00000044309	ProperStrand	197	1	-4.8791
chr1	157779999	157780041	protein_coding	Cep350	exon	ENSMUSG00000033671	ProperStrand	48	chr7	52713990	52714516	protein_coding	Ftl1	exon	ENSMUSG00000050708	ProperStrand	807	1	-8.5639
chr1	192712615	192712631	protein_coding	Rps6kc1	exon	ENSMUSG00000089872	ProperStrand	241	chr16	23110454	23110564	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-1.1709
chr13	114803261	114803278	protein_coding	Arl15	intron	ENSMUSG00000042348	NonProperStrand	19	chr4	131908380	131908418	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.3472
chr8	113566229	113566263	protein_coding	Aars	exon	ENSMUSG00000031960	ProperStrand	355	chr16	56035920	56035991	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	1	-5.4290
chr9	44196632	44196655	protein_coding	Hyou1	exon	ENSMUSG00000032115	ProperStrand	145	chr4	133688362	133690073	protein_coding	Ccdc21	exon	ENSMUSG00000037443	ProperStrand	112	27	-21.8668
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr11	98878348	98878411	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-1.3001
chr17	34671654	34671734	protein_coding	Btnl7	intron	ENSMUSG00000061728	ProperStrand	3	chr7	35058384	35058474	protein_coding	4931406P16Rik	intron	ENSMUSG00000066571	NonProperStrand	3	1	-inf
chr1	63223773	63223804	protein_coding	Eef1b2	utr5	ENSMUSG00000025967	ProperStrand	106	chrX	34622906	34622942	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-2.1852
chr10	66473673	66473763	LINE	L1Md_F3	L1	chr10L1Md_F366473673	NonProperStrand	3	chr12	91797579	91797659	LINE	L1Md_F2	L1	chr12L1Md_F291797329	NonProperStrand	1	1	-inf
chr17	39705000	39705090	LINE	L1_Mur1	L1	chr17L1_Mur139704832	ProperStrand	1	chr17	39705590	39705680	SINE	B1_Mur4	Alu	chr17B1_Mur439705595	NonProperStrand	1	1	-inf
chr17	61129365	61129388	LINE	L1_Mus1	L1	chr17L1_Mus161129320	ProperStrand	1	chr9	120037953	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-inf
chrX	98600956	98601056	protein_coding	Zmym3	exon	ENSMUSG00000031310	ProperStrand	17	chr9	15118332	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-5.9029
chr14	67670732	67670815	protein_coding	Ppp2r2a	intron	ENSMUSG00000022052	ProperStrand	45	chr7	117189925	117189989	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-6.5281
chr10	120847637	120847654	protein_coding	Rassf3	utr3	ENSMUSG00000025795	ProperStrand	26	chr4	131908689	131908807	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-4.4968
chr6	92121794	92121879	protein_coding	Nr2c2	utr3	ENSMUSG00000005893	ProperStrand	101	chr10	23505166	23505256	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-1.3071
chr6	8543540	8543557	protein_coding	Glcci1	utr3	ENSMUSG00000029638	ProperStrand	5	chr4	131908688	131908803	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-19.0004
chr14	58426035	58426053	protein_coding	F630043A04Rik	utr3	ENSMUSG00000021965	ProperStrand	24	chr7	112532973	112533068	protein_coding	Fam160a2	exon	ENSMUSG00000044465	ProperStrand	85	1	-14.4704
chr16	16316709	16316727	protein_coding	Dnm1l	exon	ENSMUSG00000022789	ProperStrand	29	chr4	131908300	131908344	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.5844
chr9	83678800	83681878	protein_coding	Elovl4	exon	ENSMUSG00000032262	ProperStrand	159	chr17	24857728	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	3	-2.8976
chr2	129998643	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr17	24857717	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	9	-1.6451
chr17	43804486	43804502	protein_coding	Cyp39a1	utr5	ENSMUSG00000023963	NonProperStrand	81	chr4	119941547	119941564	protein_coding	Foxo6	exon	ENSMUSG00000052135	ProperStrand	31	1	-14.0403
chr1	137244225	137244315	protein_coding	Lmod1	intron	ENSMUSG00000048096	ProperStrand	2	chr1	170206054	170206144	protein_coding	Pbx1	intron	ENSMUSG00000052534	ProperStrand	13	1	-inf
chr11	100182356	100182673	protein_coding	Eif1	exon	ENSMUSG00000035530	ProperStrand	115	chr5	130295454	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-4.0037
chr7	150717316	150717406	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	NonProperStrand	3	chr7	52381719	52381744	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	NonProperStrand	2	1	-inf
chr17	56257328	56257344	LTR	RLTR25B	ERVK	chr17RLTR25B56257276	NonProperStrand	75	chr1	115800777	115800804	lincRNA	9330185C12Rik	intron	ENSMUSG00000086520	ProperStrand	45	1	-13.4460
chr1	182405084	182405174	protein_coding	6330403A02Rik	intron	ENSMUSG00000053963	ProperStrand	2	chr4	61536982	61537062	pseudogene	Mup-ps18	.	ENSMUSG00000082363	ProperStrand	1	1	-inf
chr7	13516166	13516203	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr10	5989361	5989440	protein_coding	Akap12	utr3	ENSMUSG00000038587	ProperStrand	1008	2	-5.4834
chr12	71347267	71347283	protein_coding	Trim9	utr3	ENSMUSG00000021071	NonProperStrand	75	chr14	33005065	33005093	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-3.5777
chr17	23712909	23712942	protein_coding	Zfp13	utr3	ENSMUSG00000062012	ProperStrand	7	chr7	29136525	29136575	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-10.7477
chr14	56246240	56250962	protein_coding	Ipo4	exon	ENSMUSG00000002319	ProperStrand	62	chr16	23110828	23110981	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-0.7532
chr8	3613187	3613217	protein_coding	Xab2	exon	ENSMUSG00000019470	ProperStrand	52	chr3	88684242	88684323	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-7.5195
chr7	148932700	148932718	protein_coding	Muc2	exon	ENSMUSG00000025515	NonProperStrand	2	chr8	13416895	13416912	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-13.8971
chrX	150765543	150765559	LINE	L1_Mus2	L1	chrXL1_Mus2150765117	NonProperStrand	49	chr8	73419683	73419775	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.4996
chr2	168008320	168008370	protein_coding	Adnp	exon	ENSMUSG00000051149	ProperStrand	48	chr4	131908689	131908723	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.5413
chr16	91227718	91227735	protein_coding	Olig2	utr3	ENSMUSG00000039830	NonProperStrand	78	chr13	23643332	23643419	protein_coding	Hist1h4f	exon	ENSMUSG00000069274	ProperStrand	28	2	-19.7035
chr17	35646082	35646356	protein_coding	Pou5f1	exon	ENSMUSG00000024406	ProperStrand	104	chr6	115758048	115758128	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-4.4108
chr2	3382071	3382134	protein_coding	Suv39h2	exon	ENSMUSG00000026646	ProperStrand	6	chr5	121658418	121658463	protein_coding	Rpl6	exon	ENSMUSG00000029614	ProperStrand	332	1	-14.6365
chr8	96496407	96496441	protein_coding	Amfr	utr3	ENSMUSG00000031751	ProperStrand	26	chr9	15119646	15119746	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.1620
chr19	45688707	45688779	protein_coding	Fbxw4	intron	ENSMUSG00000040913	ProperStrand	18	chr19	8798507	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-12.2457
chr18	4635191	4635209	protein_coding	9430020K01Rik	intron	ENSMUSG00000033960	NonProperStrand	3	chr15	102376903	102376962	protein_coding	Atf7	exon	ENSMUSG00000052414	ProperStrand	14	1	-inf
chr4	56910509	56910618	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	chr11	74718963	74719009	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	4	-7.9615
chr19	42887446	42887464	protein_coding	Hpse2	exon	ENSMUSG00000074852	NonProperStrand	48	chr8	73419695	73419785	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.5376
chr4	86501848	86501882	protein_coding	Rps6	exon	ENSMUSG00000028495	ProperStrand	263	chr14	31826494	31826510	protein_coding	Gnl3	exon	ENSMUSG00000042354	NonProperStrand	59	1	-10.3846
chr3	88198164	88198229	protein_coding	Pmf1	utr3	ENSMUSG00000028066	ProperStrand	5	chr4	131908707	131908797	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.7672
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr5	130295415	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-1.7187
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr10	80078436	80078452	protein_coding	Scamp4	utr3	ENSMUSG00000078441	NonProperStrand	20	1	-9.1362
chr7	31663114	31664217	protein_coding	Cd22	utr5	ENSMUSG00000030577	NonProperStrand	128	chr4	86232361	86232488	snoRNA	ENSMUSG00000088958_Scarna8	.	ENSMUSG00000088958	ProperStrand	366	1	-8.1750
chr18	90014013	90014103	LINE	Lx6	L1	chr18Lx690013879	NonProperStrand	2	chr18	90013647	90013737	LINE	Lx7	L1	chr18Lx790013331	ProperStrand	1	1	-inf
chr15	92635158	92635174	LINE	L1MA4	L1	chr15L1MA492634889	NonProperStrand	27	chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	1	-14.7698
chr2	119252426	119252676	protein_coding	Ino80	exon	ENSMUSG00000034154	ProperStrand	54	chr4	108237686	108237705	protein_coding	Prpf38a	utr3	ENSMUSG00000063800	ProperStrand	10	1	-17.2035
chr4	53717652	53717670	protein_coding	Fsd1l	utr3	ENSMUSG00000054752	NonProperStrand	3	chr17	24856621	24856721	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-12.7714
mmu-miR-690	2	18	miRNA	mmu-miR-690	.	mmu-miR-690	ProperStrand	63	chr8	129468745	129468851	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	8	-inf
chr4	83131678	83131778	protein_coding	Psip1	utr5	ENSMUSG00000028484	ProperStrand	104	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-6.6470
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	115876313	115876330	protein_coding	Ift122	exon	ENSMUSG00000030323	ProperStrand	20	1	-6.6233
chr12	113081950	113083046	protein_coding	Ppp1r13b	exon	ENSMUSG00000021285	ProperStrand	8	chr11	114725275	114725313	protein_coding	Gprc5c	exon	ENSMUSG00000051043	ProperStrand	22	1	-18.6665
chr2	181405343	181405359	protein_coding	Sox18	exon	ENSMUSG00000046470	ProperStrand	96	chr11	6428108	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.3697
chr6	38590763	38590853	LTR	MTD	MaLR	chr6MTD38590702	NonProperStrand	1	chr6	38117762	38117842	protein_coding	D630045J12Rik	intron	ENSMUSG00000063455	NonProperStrand	13	1	-inf
chr19	8799414	8799433	snoRNA	ENSMUSG00000065280_SNORD28	.	ENSMUSG00000065280	ProperStrand	269	chr17	24856620	24856720	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	3	-8.7656
chr8	26843517	26843543	protein_coding	Ddhd2	exon	ENSMUSG00000061313	ProperStrand	5	chr1	88247743	88247802	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-10.2025
chr1	75484537	75484553	protein_coding	Obsl1	exon	ENSMUSG00000026211	NonProperStrand	192	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-8.4348
chr18	34993950	34997483	protein_coding	Kdm3b	exon	ENSMUSG00000038773	ProperStrand	80	chr16	23111726	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	10	-18.9806
chr14	70839103	70839134	protein_coding	Polr3d	utr3	ENSMUSG00000000776	ProperStrand	16	chr4	131908356	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-9.2689
chr16	8695185	8695260	protein_coding	Usp7	exon	ENSMUSG00000022710	ProperStrand	118	chr19	8963027	8963079	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.2405
chr12	83098617	83098633	protein_coding	Pcnx	utr3	ENSMUSG00000021140	NonProperStrand	14	chr3	123210891	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-4.7278
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr2	121949510	121949527	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	1	-5.6294
chr11	75317227	75318049	protein_coding	Prpf8	utr3	ENSMUSG00000020850	ProperStrand	255	chr15	34370542	34370622	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-1.1791
chr3	33832742	33832832	LINE	L1Md_F2	L1	chr3L1Md_F233828718	ProperStrand	1	chr15	13042518	13042598	protein_coding	Cdh6	intron	ENSMUSG00000039385	NonProperStrand	2	1	-inf
mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr2	102499187	102499204	protein_coding	Slc1a2	utr5	ENSMUSG00000005089	NonProperStrand	7	1	-10.2930
chr8	87396681	87407379	protein_coding	Syce2	exon	ENSMUSG00000003824	ProperStrand	8	chr4	131865919	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.4974
chr8	113504664	113504715	protein_coding	Ddx19a	intron	ENSMUSG00000015023	ProperStrand	21	chr7	25414110	25414127	protein_coding	Phldb3	utr3	ENSMUSG00000074277	NonProperStrand	2	1	-inf
chr11	60001911	60001927	protein_coding	Rai1	exon	ENSMUSG00000062115	NonProperStrand	81	chr5	115939496	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-7.2673
chr1	175297744	175297760	protein_coding	Aim2	intron	ENSMUSG00000037860	ProperStrand	16	chr16	23110902	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.9771
chr11	69163956	69164006	protein_coding	Chd3	intron	ENSMUSG00000018474	ProperStrand	438	chr14	66608185	66608221	protein_coding	Gulo	intron	ENSMUSG00000034450	ProperStrand	2	1	-16.8751
chr4	86501869	86502091	protein_coding	Rps6	exon	ENSMUSG00000028495	ProperStrand	263	chr4	79649400	79649439	pseudogene	Gm11408	.	ENSMUSG00000083076	NonProperStrand	13	1	-13.4658
chrX	135830003	135830093	lincRNA	C330013F16Rik	intron	ENSMUSG00000086807	ProperStrand	6	chr7	16524117	16524197	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	3	-21.2985
chr8	69041258	69041275	SINE	B3	B2	chr8B369041141	NonProperStrand	1	chr2	102143575	102143621	protein_coding	Trim44	utr3	ENSMUSG00000027189	ProperStrand	26	1	-inf
chr4	153905346	153905364	protein_coding	Prdm16	intron	ENSMUSG00000039410	ProperStrand	44	chr16	23111373	23111398	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.7117
chr5	143665182	143665224	protein_coding	Actb	utr3	ENSMUSG00000029580	ProperStrand	446	chr6	115757987	115758005	protein_coding	Rpl32	intron	ENSMUSG00000057841	ProperStrand	137	2	-12.2296
chr18	52854064	52854082	protein_coding	Gykl1	exon	ENSMUSG00000053624	ProperStrand	18	chr16	23110852	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7867
chr4	116569654	116569671	protein_coding	Zswim5	intron	ENSMUSG00000033948	ProperStrand	10	chr18	73693165	73693190	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-9.1448
chr10	80780514	80780586	protein_coding	Pip5k1c	utr3	ENSMUSG00000034902	ProperStrand	26	chr16	23111437	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.5788
chr18	24113579	24113596	protein_coding	Zfp397	intron	ENSMUSG00000024276	ProperStrand	22	chr19	8963026	8963085	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.0882
chr9	95607301	95607375	protein_coding	Trpc1	exon	ENSMUSG00000032839	ProperStrand	4	chr8	73223377	73223393	protein_coding	Jund	exon	ENSMUSG00000071076	ProperStrand	50	1	-18.8519
chr11	51595202	51595218	protein_coding	Sar1b	intron	ENSMUSG00000020386	ProperStrand	8	chr1	162967491	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	3	-17.1582
chr17	25296587	25296603	protein_coding	Clcn7	exon	ENSMUSG00000036636	ProperStrand	94	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-8.4704
chrX	7182489	7182506	protein_coding	Ccdc22	utr5	ENSMUSG00000031143	NonProperStrand	51	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-9.6961
chr11	78187791	78187809	protein_coding	Foxn1	intron	ENSMUSG00000002057	NonProperStrand	5	chr3	97370722	97373048	protein_coding	Chd1l	exon	ENSMUSG00000028089	ProperStrand	15	1	-20.1544
chr5	135718390	135718407	protein_coding	Baz1b	exon	ENSMUSG00000002748	ProperStrand	83	chr7	116664845	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.0079
chr12	70258792	70259721	protein_coding	Rps29	exon	ENSMUSG00000034892	ProperStrand	124	chrX	7624374	7624454	pseudogene	Gm7079	.	ENSMUSG00000068243	ProperStrand	1	1	-inf
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr9	40087179	40090018	protein_coding	Scn3b	exon	ENSMUSG00000049281	ProperStrand	13	1	-13.5459
chr1	115800662	115800688	lincRNA	9330185C12Rik	intron	ENSMUSG00000086520	ProperStrand	45	chr12	92811900	92812015	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	2	-14.5003
chr2	150584575	150585881	protein_coding	Entpd6	exon	ENSMUSG00000033068	ProperStrand	12	chr4	131908239	131908319	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.2270
mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr11	84236437	84236501	protein_coding	Aatf	utr3	ENSMUSG00000018697	ProperStrand	10	1	-9.5334
chr12	12944235	12944251	protein_coding	Mycn	exon	ENSMUSG00000037169	NonProperStrand	109	chr1	162966812	162966856	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-5.0917
chr2	179375438	179375504	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr7	148634711	148634801	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-2.1283
chr9	14554709	14554726	protein_coding	Fut4	utr3	ENSMUSG00000049307	NonProperStrand	19	chr7	148634701	148634730	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-6.2295
chr1	75383753	75383776	protein_coding	Speg	intron	ENSMUSG00000026207	ProperStrand	42	chr4	11181321	11181337	protein_coding	Ints8	utr5	ENSMUSG00000040738	NonProperStrand	2	1	-inf
chr15	82957992	82958037	protein_coding	Poldip3	utr3	ENSMUSG00000041815	ProperStrand	57	chr8	32260335	32260401	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-4.7286
chr7	37384310	37384327	LTR	ORR1E	MaLR	chr7ORR1E37384234	NonProperStrand	30	chr11	102294589	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	1	-10.2915
chr15	81857698	81866169	protein_coding	Xrcc6	exon	ENSMUSG00000022471	ProperStrand	34	chr16	23110909	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	7	-9.7871
chr19	42223041	42223057	protein_coding	Marveld1	utr3	ENSMUSG00000044345	NonProperStrand	112	chr12	17552949	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-3.8993
chr16	90931321	90931362	protein_coding	1110004E09Rik	exon	ENSMUSG00000022972	ProperStrand	8	chr16	23110961	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.2180
chr4	151730301	151730737	protein_coding	Chd5	exon	ENSMUSG00000005045	NonProperStrand	147	chr1	162965531	162965557	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-3.2218
chr12	86468681	86468731	protein_coding	Dlst	intron	ENSMUSG00000004789	ProperStrand	52	chr7	137767691	137767707	protein_coding	Tacc2	exon	ENSMUSG00000030852	ProperStrand	95	1	-12.6785
chr5	136385151	136385179	protein_coding	Ywhag	utr3	ENSMUSG00000051391	ProperStrand	142	chr11	69483136	69483236	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-3.5198
chr14	64081493	64081512	protein_coding	Fam167a	utr3	ENSMUSG00000035095	ProperStrand	80	chr7	149170854	149171339	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	1	-10.6692
chr18	35965827	35965863	protein_coding	Ube2d2	utr3	ENSMUSG00000091896	ProperStrand	20	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.6810
chr4	116827115	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	chr11	69483134	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	17	-3.2156
chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	chr12	106269284	106269384	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-1.0505
chr3	87972530	87972630	protein_coding	Mef2d	utr3	ENSMUSG00000001419	ProperStrand	15	chr11	107517557	107522419	protein_coding	Helz	exon	ENSMUSG00000020721	ProperStrand	60	1	-16.1548
chr9	75187990	75188090	protein_coding	Gnb5	intron	ENSMUSG00000032192	ProperStrand	1	chr8	73419683	73419715	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-inf
chr11	75123733	75123750	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr4	131865415	131865505	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-1.5158
chr9	15130901	15131001	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	chr19	8799022	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-2.0684
chr10	79375206	79375430	protein_coding	C030046I01Rik	exon	ENSMUSG00000035781	ProperStrand	14	chr10	84582284	84582300	protein_coding	Mterfd3	utr3	ENSMUSG00000049038	NonProperStrand	13	1	-19.5716
chr6	83145977	83146035	protein_coding	Dctn1	exon	ENSMUSG00000031865	ProperStrand	17	chr1	162967158	162967178	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	1	-11.2366
chr15	75756622	75756696	protein_coding	Tsta3	intron	ENSMUSG00000022570	ProperStrand	38	chr4	131908809	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	7	-14.9128
chr14	67422798	67422872	protein_coding	Dpysl2	utr3	ENSMUSG00000022048	ProperStrand	36	chr9	15119634	15119724	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.5483
chr4	118898493	118898583	protein_coding	AU022252	utr3	ENSMUSG00000078584	ProperStrand	6	chr4	131865429	131865509	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-8.6503
chr18	37911790	37911806	protein_coding	Pcdhga9	intron	ENSMUSG00000023036	ProperStrand	245	chr16	91227718	91227735	protein_coding	Olig2	utr3	ENSMUSG00000039830	NonProperStrand	78	1	-9.9653
chr5	136707645	136712956	protein_coding	Sh2b2	exon	ENSMUSG00000005057	NonProperStrand	101	chr9	120038553	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-3.8419
chr2	90235291	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	108334263	108336495	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	11	-0.7825
chr8	87223593	87223610	protein_coding	Trmt1	exon	ENSMUSG00000001909	NonProperStrand	60	chr7	106631402	106631440	snoRNA	ENSMUSG00000065822_Snord15a	.	ENSMUSG00000065822	ProperStrand	128	1	-11.7923
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr10	25221824	25221924	protein_coding	Epb4.1l2	utr3	ENSMUSG00000019978	ProperStrand	105	2	-10.7800
chr7	150238883	150238904	protein_coding	Cd81	utr5	ENSMUSG00000037706	ProperStrand	88	chr18	74938044	74938144	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	ProperStrand	1022	1	-6.8867
chr7	26559612	26559628	protein_coding	Axl	exon	ENSMUSG00000002602	NonProperStrand	47	chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	1	-11.9273
chr5	110636705	110636721	protein_coding	Golga3	exon	ENSMUSG00000029502	ProperStrand	17	chr16	23110894	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.8783
chr13	23673533	23673574	protein_coding	Hist1h4d	exon	ENSMUSG00000061482	ProperStrand	57	chr5	121655017	121655107	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	10	-20.8791
chr14	14782702	14782834	protein_coding	Thoc7	exon	ENSMUSG00000053453	ProperStrand	22	chr4	131908813	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-4.9672
chr5	31369460	31379853	protein_coding	Cad	exon	ENSMUSG00000013629	ProperStrand	260	chr16	23110828	23111011	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	11	-0.9639
chrX	101478935	101478972	protein_coding	Abcb7	utr3	ENSMUSG00000031333	ProperStrand	22	chr14	33005100	33005140	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-5.9434
chr19	10289326	10289416	protein_coding	Gm98	exon	ENSMUSG00000036098	ProperStrand	26	chr11	69483200	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-9.7687
chr2	86138158	86138174	protein_coding	Olfr1052	exon	ENSMUSG00000047149	NonProperStrand	119	chr14	76247753	76247776	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-2.9146
chr1	89848940	89848967	protein_coding	Usp40	exon	ENSMUSG00000005501	ProperStrand	11	chr12	17552980	17553087	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-8.4977
chrX	70931640	70931730	protein_coding	Bcap31	utr3	ENSMUSG00000002015	ProperStrand	21	chr18	35716806	35716886	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.0576
chr9	59527058	59527076	protein_coding	Pkm2	utr3	ENSMUSG00000032294	ProperStrand	1296	chr8	20020195	20020285	pseudogene	2610005L07Rik	.	ENSMUSG00000071793	ProperStrand	40	3	-18.0253
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr9	15118245	15118323	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	3	-0.8432
chr1	71652500	71652590	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr15	79751750	79751830	protein_coding	Cbx7	intron	ENSMUSG00000053411	ProperStrand	62	1	-7.7677
chr4	131865497	131865526	lincRNA	Snhg12	intron	ENSMUSG00000086290	ProperStrand	178	chr4	130310066	130310122	protein_coding	Pum1	intron	ENSMUSG00000028580	ProperStrand	131	1	-9.5650
chr17	38290745	38290764	LTR	MurERV4-int	ERVK	chr17MurERV4-int38290059	ProperStrand	21	chr4	135327523	135329683	protein_coding	Myom3	exon	ENSMUSG00000037139	NonProperStrand	62	1	-15.3985
chr11	104196281	104196380	protein_coding	1700081L11Rik	utr3	ENSMUSG00000018412	ProperStrand	73	chr18	35716816	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.8536
chr11	95819571	95819636	protein_coding	Igf2bp1	utr3	ENSMUSG00000013415	ProperStrand	140	chr2	130102941	130103014	protein_coding	Nop56	exon	ENSMUSG00000027405	ProperStrand	125	1	-10.1390
chr9	69864693	69867209	protein_coding	Gtf2a2	exon	ENSMUSG00000033543	ProperStrand	9	chr9	64024526	64024568	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	1	-12.2471
chr15	11680093	11680109	LINE	Lx7	L1	chr15Lx711680097	NonProperStrand	6	chr1	162967490	162967517	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-8.0824
chr2	158182181	158182278	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	chr1	162967137	162967179	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	1	-1.0526
chr9	118465391	118465467	protein_coding	Golga4	utr3	ENSMUSG00000038708	ProperStrand	95	chr2	83693562	83693578	protein_coding	Fam171b	exon	ENSMUSG00000048388	NonProperStrand	175	1	-10.2425
chr11	60231065	60231086	protein_coding	4933439F18Rik	utr5	ENSMUSG00000018415	ProperStrand	26	chr5	34242006	34242109	protein_coding	Whsc2	exon	ENSMUSG00000029111	ProperStrand	9	1	-18.6272
chr15	98674663	98674763	protein_coding	Mll2	exon	ENSMUSG00000048154	ProperStrand	170	chr11	74718936	74719010	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	1	-6.9508
chr15	38430059	38430096	protein_coding	Azin1	exon	ENSMUSG00000037458	ProperStrand	13	chr16	23110964	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.3283
chr11	106649879	106649896	protein_coding	Ddx5	intron	ENSMUSG00000020719	NonProperStrand	2	chr2	157600274	157605561	protein_coding	Ctnnbl1	exon	ENSMUSG00000027649	ProperStrand	26	1	-inf
chr12	31975135	31975152	protein_coding	Lamb1	intron	ENSMUSG00000002900	NonProperStrand	45	chr9	78328192	78328319	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-6.9051
chr10	62056728	62056758	protein_coding	Ddx21	exon	ENSMUSG00000020075	ProperStrand	137	chr11	115337843	115337901	protein_coding	Armc7	intron	ENSMUSG00000057219	ProperStrand	3	1	-18.5125
chr8	95595777	95595793	protein_coding	Ces1b	exon	ENSMUSG00000078964	ProperStrand	1	chr15	98350146	98350201	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-inf
chr19	5719336	5719352	protein_coding	Ehbp1l1	exon	ENSMUSG00000024937	ProperStrand	75	chr4	95690365	95690428	protein_coding	Hook1	utr3	ENSMUSG00000028572	ProperStrand	49	1	-13.2753
chr7	73804714	73804731	protein_coding	Asb7	exon	ENSMUSG00000030509	ProperStrand	10	chr17	39985193	39985258	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-9.5626
chr11	75314382	75314593	protein_coding	Prpf8	utr3	ENSMUSG00000020850	ProperStrand	255	chr1	135553529	135553619	protein_coding	Zc3h11a	intron	ENSMUSG00000026464	ProperStrand	102	1	-9.3480
chr19	10058782	10058812	protein_coding	Fth1	exon	ENSMUSG00000024661	ProperStrand	75	chr4	131908236	131908298	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	5	-6.7398
chr11	114558024	114558114	protein_coding	Ttyh2	exon	ENSMUSG00000034714	ProperStrand	23	chr17	24857717	24857797	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	7	-19.7130
chr15	79908809	79909168	protein_coding	Rpl3	exon	ENSMUSG00000060036	ProperStrand	8342	chr4	41158540	41158579	snoRNA	ENSMUSG00000089308_SNORD121A	.	ENSMUSG00000089308	ProperStrand	209	1	-1.4892
chr6	34063162	34063252	protein_coding	Lrguk	intron	ENSMUSG00000056215	NonProperStrand	6	chr3	108156499	108156579	protein_coding	Sort1	intron	ENSMUSG00000068747	NonProperStrand	6	1	-18.9143
chr7	54443423	54443523	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	chr7	52381719	52381760	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-4.0895
chr3	99003130	99003158	protein_coding	Wars2	intron	ENSMUSG00000004233	NonProperStrand	48	chrX	34622906	34622968	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	4	-11.9490
chr3	32237846	32237946	protein_coding	Zmat3	utr3	ENSMUSG00000027663	ProperStrand	62	chr13	21261595	21261634	tRNA	tRNA999-MetCAT	.	323299	ProperStrand	63	1	-13.1524
chr15	39703954	39704011	protein_coding	Lrp12	exon	ENSMUSG00000022305	ProperStrand	11	chr4	131908781	131908871	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-10.3697
chr2	98174031	98174048	LTR	IAPLTR3-int	ERVK	chr2IAPLTR3-int98170118	ProperStrand	37	chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	1	-14.1308
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr7	51505507	51505592	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	1	-3.4154
chr5	45065287	45065303	protein_coding	Ldb2	intron	ENSMUSG00000039706	NonProperStrand	15	chr13	86184612	86184651	snoRNA	ENSMUSG00000064917_snoZ39	.	ENSMUSG00000064917	ProperStrand	15	1	-19.0472
chr7	52974913	52974936	protein_coding	Rpl18	exon	ENSMUSG00000059070	ProperStrand	116	chr18	35716809	35716857	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.1777
chr7	105790067	105790126	protein_coding	2210018M11Rik	exon	ENSMUSG00000035401	ProperStrand	24	chr11	69483136	69483191	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.1173
chr8	126868157	126868257	protein_coding	Gm20388	utr3	ENSMUSG00000092329	ProperStrand	295	chr4	131865868	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	6	-2.5650
chr15	76011802	76011843	protein_coding	Plec	exon	ENSMUSG00000022565	ProperStrand	186	chr7	118219574	118219602	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-2.1515
chr14	60203662	60203711	protein_coding	Cdadc1	intron	ENSMUSG00000021982	ProperStrand	5	chr15	34370545	34370636	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-8.5662
chr10	79589090	79589439	protein_coding	Stk11	exon	ENSMUSG00000003068	ProperStrand	24	chr2	179910081	179910344	protein_coding	Adrm1	exon	ENSMUSG00000039041	ProperStrand	27	3	-19.8077
chr4	57706987	57707003	protein_coding	Palm2	intron	ENSMUSG00000090053	NonProperStrand	187	chr11	97642956	97643038	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-0.8106
chr17	43176820	43176903	protein_coding	Tnfrsf21	exon	ENSMUSG00000023915	ProperStrand	36	chr6	71832622	71832642	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	3	-15.1217
chr11	51809304	51809404	protein_coding	Ube2b	intron	ENSMUSG00000020390	ProperStrand	57	chr5	130300442	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-6.8238
chr11	77926276	77926366	protein_coding	BC017647	intron	ENSMUSG00000037750	ProperStrand	19	chr16	23111373	23111453	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.1411
chr2	144116363	144116384	LTR	MLT2B2	ERVL	chr2MLT2B2144116217	NonProperStrand	17	chr18	35716778	35716878	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.4666
chr14	56159296	56159313	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	chr15	98350178	98350268	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-2.5847
chr5	74489203	74489293	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr10	21087519	21087554	protein_coding	Hbs1l	exon	ENSMUSG00000019977	ProperStrand	27	2	-11.6117
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr2	158184092	158184194	snoRNA	ENSMUSG00000064995_SNORA71	.	ENSMUSG00000064995	ProperStrand	430	2	-5.8458
chr18	34968598	34968670	protein_coding	Kdm3b	exon	ENSMUSG00000038773	ProperStrand	80	chr17	24856620	24856699	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	5	-20.0132
chr9	40610087	40610121	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr2	25915656	25915672	protein_coding	Nacc2	exon	ENSMUSG00000026932	ProperStrand	98	1	-7.1615
chr17	24857674	24857724	protein_coding-noncoding	Rps2	utr5	ENSMUSG00000044533	ProperStrand	29	chr19	8963027	8963050	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.5658
chr10	116539200	116585466	protein_coding	Frs2	utr5	ENSMUSG00000020170	ProperStrand	10	chr2	26768395	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-9.2243
chr11	100212569	100212752	protein_coding	Hap1	exon	ENSMUSG00000006930	ProperStrand	21	chr16	11828681	11887677	protein_coding	Cpped1	exon	ENSMUSG00000065979	ProperStrand	13	2	-inf
chr11	95610386	95610476	protein_coding	Zfp652	utr5	ENSMUSG00000075595	ProperStrand	48	chr5	147646746	147646826	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	1	-8.4054
chr11	117583392	117583492	protein_coding	Tnrc6c	exon	ENSMUSG00000025571	ProperStrand	51	chr3	95980322	95980361	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	3	-16.2228
chr3	133149701	133149801	protein_coding	Tet2	exon	ENSMUSG00000040943	ProperStrand	192	chr11	77995189	77995255	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	3	-9.5844
chr2	180646449	180646534	protein_coding	Ythdf1	exon	ENSMUSG00000038848	ProperStrand	59	chr16	23111429	23111500	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.2821
chr9	37460632	37460679	protein_coding	Tbrg1	exon	ENSMUSG00000011114	ProperStrand	56	chr3	108357268	108357358	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-4.6724
chr7	20287082	20287172	protein_coding	Tomm40	exon	ENSMUSG00000002984	ProperStrand	57	chr18	73693109	73693134	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	2	-9.1938
chr2	27872834	27873976	protein_coding	Col5a1	exon	ENSMUSG00000026837	ProperStrand	35	chr7	29136562	29136642	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.3165
chr9	53287714	53287731	protein_coding	Atm	exon	ENSMUSG00000034218	NonProperStrand	7	chr9	15118245	15118307	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-7.7405
chr1	168083363	168083380	protein_coding	Gpa33	intron	ENSMUSG00000000544	ProperStrand	33	chr1	177622596	177622614	protein_coding	Opn3	exon	ENSMUSG00000026525	ProperStrand	31	1	-15.8227
chr2	131106285	131106362	protein_coding	Pank2	intron	ENSMUSG00000037514	ProperStrand	14	chr7	117189959	117190013	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-6.1508
chr11	84042523	84045163	protein_coding	Acaca	exon	ENSMUSG00000020532	ProperStrand	100	chr1	162966251	162966269	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-6.5621
chr5	92493387	92502191	protein_coding	G3bp2	exon	ENSMUSG00000029405	ProperStrand	78	chr10	23505190	23505285	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	9	-13.4900
chr8	11561799	11561879	protein_coding	Ing1	exon	ENSMUSG00000045969	ProperStrand	38	chr7	29136561	29136651	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.1665
chr8	23486696	23486786	protein_coding	Slc25a15	utr3	ENSMUSG00000031482	ProperStrand	13	chr10	110918549	110918679	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	4	-20.3013
chr10	7541305	7541336	protein_coding	Ppil4	utr3	ENSMUSG00000015757	ProperStrand	18	chr10	23505152	23505235	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.2069
chr6	121423179	121423195	protein_coding	Iqsec3	utr5	ENSMUSG00000040797	NonProperStrand	139	chr16	11575947	11576006	protein_coding	Snx29	intron	ENSMUSG00000071669	ProperStrand	10	1	-15.2749
chr6	85418226	85418244	protein_coding	Cct7	exon	ENSMUSG00000030007	NonProperStrand	2	chr18	35714144	35714257	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	NonProperStrand	47	2	-inf
chr3	33938491	33940025	protein_coding	Fxr1	exon	ENSMUSG00000027680	ProperStrand	58	chr4	131865856	131865946	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.8207
chr11	69037669	69037685	protein_coding	Gucy2e	exon	ENSMUSG00000020890	NonProperStrand	99	chr15	79654442	79654459	protein_coding	Cbx6	utr3	ENSMUSG00000089715	NonProperStrand	11	1	-15.7577
chr1	134963436	134963528	protein_coding	Pik3c2b	exon	ENSMUSG00000026447	ProperStrand	24	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-7.0265
chrX	98637091	98637155	protein_coding	Nono	exon	ENSMUSG00000031311	ProperStrand	102	chr15	5068427	5068470	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	4	-15.6188
chr11	69405208	69405281	protein_coding	Trp53	utr3	ENSMUSG00000059552	ProperStrand	47	chr19	8798517	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	3	-13.2140
chr9	108469005	108469033	protein_coding	Ndufaf3	exon	ENSMUSG00000070283	ProperStrand	2	chr7	118219574	118219612	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-11.5289
chr18	4396906	4396954	protein_coding	Mtpap	utr3	ENSMUSG00000024234	ProperStrand	6	chr19	8800426	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-13.2723
chr11	95276106	95276206	protein_coding	Spop	intron	ENSMUSG00000057522	ProperStrand	22	chr19	8799040	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-7.8356
chr7	13619255	13619289	protein_coding	Chmp2a	exon	ENSMUSG00000033916	ProperStrand	17	chr1	89673664	89673764	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-5.6845
chr7	133531218	133531254	protein_coding	Nfatc2ip	exon	ENSMUSG00000030722	ProperStrand	26	chr18	73693168	73693186	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-7.1841
chr12	70259713	70260056	protein_coding	Rps29	utr5	ENSMUSG00000034892	ProperStrand	124	chr10	120709244	120712786	protein_coding	Tbc1d30	exon	ENSMUSG00000052302	ProperStrand	233	2	-14.4795
chr14	51427119	51427209	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr12	60141422	60141502	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-1.3127
chr17	13811731	13811811	protein_coding	Tcte2	intron	ENSMUSG00000038347	ProperStrand	21	chr4	56910503	56910593	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	2	-13.1341
chr9	15069885	15069901	protein_coding	Med17	exon	ENSMUSG00000031935	ProperStrand	135	chr18	33954816	33954890	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-2.0908
chr10	116511107	116511197	protein_coding	Frs2	exon	ENSMUSG00000020170	ProperStrand	10	chr8	129468768	129468848	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-7.9945
chr5	72950539	72950555	protein_coding	Nfxl1	utr5	ENSMUSG00000072889	NonProperStrand	21	chr14	76247711	76247768	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-10.1450
chr4	133251843	133251923	protein_coding	Arid1a	exon	ENSMUSG00000007880	ProperStrand	465	chr3	36466809	36467555	protein_coding	Ccna2	exon	ENSMUSG00000027715	ProperStrand	74	65	-19.4845
chr9	15119968	15120040	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	chr5	111121065	111121124	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-1.0743
chr17	25296587	25296603	protein_coding	Clcn7	exon	ENSMUSG00000036636	ProperStrand	94	chr1	162966812	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-5.3788
chr6	134075009	134075109	protein_coding	Etv6	intron	ENSMUSG00000030199	ProperStrand	46	chr12	112779230	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-5.2914
chrX	72214248	72214264	protein_coding-noncoding	Gab3	utr3	ENSMUSG00000032750	ProperStrand	420	chr17	33960019	33960043	protein_coding	Rps28	utr3	ENSMUSG00000067288	ProperStrand	52	1	-9.7039
chr7	87226717	87226807	protein_coding	Zfp710	exon	ENSMUSG00000048897	ProperStrand	229	chr9	120037918	120037998	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	2	-4.0400
chr7	52093072	52093162	protein_coding-noncoding	Il4i1	utr5	ENSMUSG00000074141	ProperStrand	1	chr10	82772642	82772732	protein_coding	Slc41a2	intron	ENSMUSG00000034591	NonProperStrand	8	1	-inf
chr19	44188368	44188453	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr5	3693225	3693242	protein_coding	Ankib1	exon	ENSMUSG00000040351	NonProperStrand	98	1	-6.8197
chr18	6470223	6470313	protein_coding	Epc1	intron	ENSMUSG00000024240	ProperStrand	9	chr11	6519827	6519907	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-11.8227
chr14	103713521	103713597	protein_coding	Mycbp2	exon	ENSMUSG00000033004	ProperStrand	129	chr7	29136538	29136628	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	6	-8.8979
chr4	116826533	116828177	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	chr5	130300419	130300521	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-1.0779
chr4	123144718	123144779	protein_coding	Macf1	intron	ENSMUSG00000028649	ProperStrand	320	chr4	120819730	120819830	protein_coding	Rlf	exon	ENSMUSG00000049878	ProperStrand	58	2	-15.8041
chrX	148350361	148350681	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	chr12	112046126	112046142	protein_coding	Stk30	utr3	ENSMUSG00000056458	NonProperStrand	2	1	-16.6309
chr13	46765144	46765160	protein_coding	C78339	exon	ENSMUSG00000069237	NonProperStrand	104	chr18	35716762	35716816	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-2.5266
chr19	44379565	44379612	protein_coding	Scd2	utr3	ENSMUSG00000025203	ProperStrand	219	chr6	87769189	87769558	protein_coding	Isy1	exon	ENSMUSG00000030056	ProperStrand	172	1	-8.6079
chr10	6450631	6450649	protein_coding	Plekhg1	intron	ENSMUSG00000040624	NonProperStrand	75	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.8761
chr9	72764722	72764768	protein_coding	Prtg	utr3	ENSMUSG00000036030	ProperStrand	34	chr2	76398741	76398758	protein_coding	Osbpl6	intron	ENSMUSG00000042359	ProperStrand	19	1	-16.7300
chr7	117189952	117190042	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	NonProperStrand	17	chr7	117166777	117166857	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	NonProperStrand	4	1	-inf
chr4	116827118	116827187	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	chr2	26494701	26494842	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	18	-7.7189
chr9	78327196	78327244	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr15	99041345	99041445	protein_coding	Spats2	exon	ENSMUSG00000051934	ProperStrand	71	1	-6.0024
chr9	20711993	20712370	protein_coding	Dnmt1	exon	ENSMUSG00000004099	ProperStrand	91	chr5	108336378	108336468	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-4.0862
chr2	119631389	119633583	protein_coding	Tyro3	exon	ENSMUSG00000027298	ProperStrand	35	chr4	131908810	131908890	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.0337
chr1	63260754	63260771	protein_coding	Gpr1	utr5	ENSMUSG00000046856	NonProperStrand	32	chr14	76247711	76247779	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-5.3863
chr2	179648267	179655912	protein_coding	Taf4a	exon	ENSMUSG00000039117	ProperStrand	15	chr15	79913288	79913346	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-6.2900
chr6	6065082	6067172	protein_coding	Slc25a13	exon	ENSMUSG00000015112	ProperStrand	78	chr8	73419657	73419727	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.6659
chr3	97817679	97851652	protein_coding	Notch2	exon	ENSMUSG00000027878	ProperStrand	86	chr16	23111722	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-2.5866
chr3	88991057	88991147	protein_coding	Fam189b	exon	ENSMUSG00000032657	ProperStrand	4	chr16	23110526	23110553	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-7.8518
chr2	165942460	165958166	protein_coding	Sulf2	exon	ENSMUSG00000006800	ProperStrand	171	chr16	23111777	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-3.0615
chr10	80720372	80720388	protein_coding	Matk	intron	ENSMUSG00000004933	NonProperStrand	1	chr3	97817679	97851652	protein_coding	Notch2	exon	ENSMUSG00000027878	ProperStrand	86	1	-inf
chr8	129933535	129939497	protein_coding	Pard3	exon	ENSMUSG00000025812	ProperStrand	44	chr7	30231519	30231596	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	2	-14.9945
chr8	125100712	125100769	protein_coding	Aprt	utr5	ENSMUSG00000006589	ProperStrand	20	chr8	86550968	86552025	protein_coding	Palm3	exon	ENSMUSG00000047986	ProperStrand	3	1	-inf
chr11	66383346	66383362	LTR	RLTR24	ERV1	chr11RLTR2466382883	ProperStrand	1	chrX	70237450	70237471	miRNA	Mir2137	.	ENSMUSG00000089357	ProperStrand	50	1	-inf
chr7	121363045	121363101	protein_coding	Copb1	exon	ENSMUSG00000030754	ProperStrand	25	chr11	34935054	34935073	protein_coding	Slit3	exon	ENSMUSG00000056427	NonProperStrand	45	1	-15.6518
chr2	102010644	102010734	protein_coding	Ldlrad3	intron	ENSMUSG00000048058	ProperStrand	53	chr11	97642967	97643047	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.6858
chr12	88912985	88913005	protein_coding	Gm2022	intron	ENSMUSG00000071217	NonProperStrand	57	chr1	162965531	162965550	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.3697
chr10	110931305	110931338	protein_coding	Nap1l1	exon	ENSMUSG00000058799	ProperStrand	185	chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-3.6870
chr16	57391759	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr15	35769757	35771016	protein_coding	Vps13b	exon	ENSMUSG00000037646	ProperStrand	56	1	-7.9310
chr4	124736327	124736344	protein_coding	Dnali1	exon	ENSMUSG00000042707	ProperStrand	45	chr11	97643056	97643078	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.9748
chr4	132752240	132752322	protein_coding	Wasf2	utr3	ENSMUSG00000028868	ProperStrand	56	chr1	72871525	72895670	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	1	-9.6225
chr11	72130669	72130685	protein_coding	Fbxo39	exon	ENSMUSG00000070388	ProperStrand	5	chr11	106362641	106362692	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	2	-18.9947
chr2	90235314	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	131005331	131005348	protein_coding	Cenpb	exon	ENSMUSG00000068267	NonProperStrand	38	1	-5.3470
chr8	109188300	109189360	protein_coding	Cdh1	exon	ENSMUSG00000000303	ProperStrand	283	chr19	8963092	8963172	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-0.7502
chr8	74000451	74008417	protein_coding	Ano8	exon	ENSMUSG00000034863	NonProperStrand	171	chr15	79908929	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	2	-5.9188
chr1	155319822	155319857	protein_coding	Dhx9	exon	ENSMUSG00000042699	ProperStrand	98	chr18	74938044	74938148	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	ProperStrand	1022	2	-10.7665
chr19	29000301	29000318	protein_coding	4430402I18Rik	intron	ENSMUSG00000064202	ProperStrand	5	chr5	130300419	130300496	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-7.4021
chr1	133252344	133252402	protein_coding	Srgap2	intron	ENSMUSG00000026425	ProperStrand	299	chr18	33954849	33954950	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-1.8815
chr8	74906578	74906594	protein_coding	Eps15l1	exon	ENSMUSG00000006276	NonProperStrand	42	chr5	115939506	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-8.5804
chr15	94416715	94416736	protein_coding	Twf1	intron	ENSMUSG00000022451	ProperStrand	32	chr11	106362639	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-8.6656
chr10	62666406	62666486	protein_coding	Mypn	utr5	ENSMUSG00000020067	NonProperStrand	4	chr10	70381428	70381518	protein_coding	4930533K18Rik	intron	ENSMUSG00000047692	ProperStrand	1	1	-inf
chr7	116078254	116078275	protein_coding	Eif3f	exon	ENSMUSG00000031029	ProperStrand	69	chr11	6428108	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-7.5408
chr4	133694787	133694825	protein_coding	Ccdc21	exon	ENSMUSG00000037443	ProperStrand	112	chr19	8798490	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-6.7420
chr8	97772867	97772883	protein_coding	Cngb1	exon	ENSMUSG00000031789	NonProperStrand	17	chr11	69481335	69481417	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.6167
chr6	70794802	70794818	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chr1	162967115	162967178	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	3	-15.3992
chr7	13516164	13516204	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr8	32260335	32260424	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	6	-6.9835
chr19	35030552	35030598	protein_coding	Kif20b	intron	ENSMUSG00000024795	ProperStrand	45	chr4	131865891	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-6.0536
chr7	13516155	13516205	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr5	147646795	147646848	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	2	-5.8809
chr2	25563070	25563086	antisense	A230005M16Rik	.	ENSMUSG00000087612	ProperStrand	103	chr4	131865856	131865935	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.0058
chr11	69559568	69559602	protein_coding	Polr2a	exon	ENSMUSG00000005198	ProperStrand	200	chr1	155096730	155096820	protein_coding	Lamc1	exon	ENSMUSG00000026478	ProperStrand	239	1	-8.1337
chr2	158182200	158182293	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	chr8	13876097	13876226	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	14	-15.7007
chr3	34080052	34080069	non_coding	Sox2ot	.	ENSMUSG00000090828	NonProperStrand	13	chr4	131865389	131865489	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-7.0177
chr2	179773956	179773989	protein_coding	Psma7	intron	ENSMUSG00000027566	ProperStrand	45	chr3	101261968	101262020	protein_coding	Igsf3	exon	ENSMUSG00000042035	ProperStrand	73	2	-19.7936
chr11	95613924	95613999	protein_coding	Zfp652	intron	ENSMUSG00000075595	ProperStrand	48	chr4	131908809	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.5413
chr2	32818118	32818149	protein_coding	Rpl12	exon	ENSMUSG00000038900	ProperStrand	167	chr17	45769879	45770002	protein_coding	Capn11	exon	ENSMUSG00000058626	ProperStrand	19	1	-13.5918
chr5	117827866	117827916	protein_coding	Wsb2	utr3	ENSMUSG00000029364	ProperStrand	15	chr18	33954881	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-6.1972
chr17	4082929	4082972	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr6	125112097	125112307	protein_coding	Gapdh	exon	ENSMUSG00000057666	ProperStrand	356	4	-19.2675
chr17	23744383	23744482	protein_coding	Zscan10	intron	ENSMUSG00000023902	ProperStrand	9	chr15	79913288	79913321	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-7.3434
chr4	53873604	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	chr14	76247722	76247835	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	3	-2.5689
chr18	36926267	36926291	protein_coding	Hars	utr3	ENSMUSG00000001380	ProperStrand	23	chr18	35716764	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.8840
chr4	147868872	147868888	protein_coding	Mtor	intron	ENSMUSG00000028991	ProperStrand	65	chr8	73419745	73419773	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.9868
chr13	3575641	3575685	protein_coding	BC016423	exon	ENSMUSG00000033799	ProperStrand	15	chr4	131908810	131908885	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-6.0926
chr8	113235550	113235607	protein_coding	Vac14	exon	ENSMUSG00000010936	ProperStrand	27	chr16	23109024	23109091	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-8.8859
chr5	143633095	143633127	protein_coding	Fbxl18	utr3	ENSMUSG00000066640	ProperStrand	64	chr4	131908705	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.1372
chr11	87614627	87614643	antisense	Gm11505	.	ENSMUSG00000085872	ProperStrand	37	chr9	15119967	15120036	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-8.2207
chr4	6353608	6355616	protein_coding	Nsmaf	exon	ENSMUSG00000028245	ProperStrand	15	chr16	23111735	23111815	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.3973
chr5	67789688	67791400	protein_coding	Bend4	exon	ENSMUSG00000092060	ProperStrand	56	chr3	123210854	123210894	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.1794
chrX	148353371	148353414	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	chr4	116827118	116827187	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-2.9870
chr6	115754268	115754368	protein_coding	Cand2	utr3	ENSMUSG00000030319	ProperStrand	40	chr18	35716815	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	7	-19.6119
chr4	55544559	55544599	protein_coding	Klf4	exon	ENSMUSG00000003032	ProperStrand	64	chr16	23111722	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-5.0858
chr5	115940328	115940406	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	chr10	23505577	23505621	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-3.1519
chr2	129998665	129998715	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr2	181316563	181316579	protein_coding	Uckl1	exon	ENSMUSG00000089917	ProperStrand	142	1	-6.3992
chr13	41145000	41145018	protein_coding	Mak	intron	ENSMUSG00000021363	ProperStrand	1	chr7	117189864	117189922	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-inf
chr12	25397529	25397553	protein_coding	Rrm2	exon	ENSMUSG00000020649	ProperStrand	65	chr17	24857717	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	5	-10.5325
chr16	66842819	66842835	protein_coding	Cadm2	intron	ENSMUSG00000064115	NonProperStrand	21	chr1	162967489	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-5.4889
chr1	7153445	7159661	protein_coding	Pcmtd1	exon	ENSMUSG00000051285	ProperStrand	19	chr7	148634777	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	3	-14.4542
chr2	24825186	24827046	protein_coding	Wdr85	exon	ENSMUSG00000026975	ProperStrand	323	chr11	77995203	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-2.9924
chr8	18933142	18933180	protein_coding	Xkr5	utr3	ENSMUSG00000039814	ProperStrand	6	chr11	69483136	69483186	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-11.4504
chr7	141399351	141399367	protein_coding	Adam12	intron	ENSMUSG00000054555	NonProperStrand	49	chr19	8963035	8963082	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.6199
chr17	36097663	36097764	protein_coding	Abcf1	exon	ENSMUSG00000038762	ProperStrand	206	chr13	23855723	23855743	protein_coding	Hist1h1a	exon	ENSMUSG00000049539	ProperStrand	34	1	-11.9860
chr17	31640574	31640590	protein_coding	Wdr4	exon	ENSMUSG00000024037	NonProperStrand	18	chr10	23505150	23505258	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-5.5683
chr10	6063958	6063976	protein_coding	Akap12	intron	ENSMUSG00000038587	ProperStrand	1008	chr18	75160711	75160776	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	1	-3.6798
chr9	119467415	119467433	protein_coding	Scn5a	intron	ENSMUSG00000032511	NonProperStrand	6	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-10.5659
chr19	47970971	47970987	protein_coding	Itprip	utr3	ENSMUSG00000079254	ProperStrand	75	chr5	130295414	130295492	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-4.8164
chr10	75998983	75999000	protein_coding	Lss	exon	ENSMUSG00000033105	ProperStrand	56	chr8	73419749	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.2551
chr13	49778034	49778079	protein_coding	Iars	intron	ENSMUSG00000037851	ProperStrand	95	chr7	150717298	150717370	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	2	-7.6578
chr11	97032856	97043138	protein_coding	Kpnb1	exon	ENSMUSG00000001440	ProperStrand	197	chr5	121655102	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-3.1327
chr6	29559439	29559484	protein_coding	Tnpo3	exon	ENSMUSG00000012535	ProperStrand	58	chr9	56775853	56775870	protein_coding	Snx33	utr5	ENSMUSG00000032733	NonProperStrand	116	2	-18.7355
chr1	59274919	59277240	protein_coding	Als2	utr5	ENSMUSG00000026024	ProperStrand	32	chr14	31826494	31826510	protein_coding	Gnl3	exon	ENSMUSG00000042354	NonProperStrand	59	1	-14.6117
chr11	45949876	45949893	protein_coding	Adam19	exon	ENSMUSG00000011256	ProperStrand	134	chr7	52382289	52382314	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-6.6859
chr17	34472788	34472804	protein_coding	H2-Eb2	exon	ENSMUSG00000067341	NonProperStrand	17	chr19	8963027	8963166	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.5881
chr1	90160799	90160889	protein_coding	Hjurp	utr3	ENSMUSG00000044783	ProperStrand	110	chr11	68886947	68887027	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-3.0278
chr11	97950447	97950525	protein_coding	Fbxl20	utr3	ENSMUSG00000020883	ProperStrand	23	chr9	64024525	64024567	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	1	-10.3017
chrX	20273209	20273504	protein_coding	Cdk16	exon	ENSMUSG00000031065	ProperStrand	30	chr5	74489596	74489676	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-5.1050
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr7	52713375	52713447	protein_coding	Ftl1	utr3	ENSMUSG00000050708	ProperStrand	807	4	-9.8014
chr10	86221857	86221873	protein_coding	BC030307	exon	ENSMUSG00000044937	ProperStrand	77	chr1	162967490	162967509	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-3.0222
chr10	127827677	127827767	protein_coding	Ankrd52	exon	ENSMUSG00000014498	ProperStrand	26	chr10	23505201	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.5465
chr10	82448535	82448551	protein_coding	Chst11	utr5	ENSMUSG00000034612	ProperStrand	170	chr3	123210878	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-1.3676
chr10	126532006	126532058	protein_coding	Os9	utr3	ENSMUSG00000040462	ProperStrand	72	chr1	9932550	9932595	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	2	-11.8143
chr2	90235322	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	155287307	155287354	snoRNA	ENSMUSG00000064435_SNORA4	.	ENSMUSG00000064435	ProperStrand	263	1	-1.8447
chr9	15119646	15119968	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	chr13	90238585	90238718	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	4	-0.7442
chr3	93250306	93250322	protein_coding	Tchh	exon	ENSMUSG00000052415	ProperStrand	26	chr8	32260328	32260372	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-6.2695
chr3	88603807	88603898	pseudogene	5830417I10Rik	.	ENSMUSG00000078684	ProperStrand	68	chr4	131908715	131908795	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.0584
chr1	153759643	153759664	protein_coding	1700025G04Rik	intron	ENSMUSG00000032666	NonProperStrand	35	chr9	103401280	103401296	protein_coding	Tmem108	exon	ENSMUSG00000042757	NonProperStrand	323	1	-11.0280
chr11	72257563	72257580	protein_coding	Mybbp1a	exon	ENSMUSG00000040463	ProperStrand	279	chr4	63224978	63225002	protein_coding	6330416G13Rik	intron	ENSMUSG00000045917	ProperStrand	6	1	-14.9836
chr10	114739828	114752291	protein_coding	Rab21	exon	ENSMUSG00000020132	ProperStrand	8	chr10	23505152	23505217	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-8.1135
chr9	100966289	100966307	SINE	B4A	B4	chr9B4A100966214	ProperStrand	51	chr11	97643045	97643061	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.7531
chr11	48616678	48616708	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	chr5	130295414	130295521	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	2	-3.1270
chr2	179322380	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr9	26906297	26906313	protein_coding	Jam3	exon	ENSMUSG00000031990	ProperStrand	30	1	-12.6141
chr18	33157688	33157705	protein_coding	Camk4	intron	ENSMUSG00000038128	NonProperStrand	42	chr11	51551338	51551412	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	1	-8.4139
chr4	96295886	96295904	protein_coding	Cyp2j5	utr3	ENSMUSG00000052520	ProperStrand	1	chr2	127284913	127284930	protein_coding	Kcnip3	intron	ENSMUSG00000079056	ProperStrand	14	1	-inf
chr3	88727662	88727740	protein_coding	Dap3	utr3	ENSMUSG00000068921	ProperStrand	58	chr5	121655052	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.8108
chr8	86257413	86257510	protein_coding	Cd97	intron	ENSMUSG00000002885	ProperStrand	37	chr17	24856703	24856753	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	5	-20.5762
chr12	55797777	55797932	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	chr18	35714161	35714285	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	5	-1.1408
chr8	47619848	47619905	protein_coding	Acsl1	utr3	ENSMUSG00000018796	ProperStrand	23	chr16	23111416	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-10.0533
chr13	63612936	63612952	protein_coding	Ptch1	exon	ENSMUSG00000021466	NonProperStrand	118	chr2	63936035	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-6.5182
chr2	90235293	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr12	112779148	112779282	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	26	-9.0438
chr1	75407769	75407869	protein_coding	Speg	exon	ENSMUSG00000026207	NonProperStrand	11	chr7	134671419	134671519	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-11.3278
chr11	20586186	20592532	protein_coding	Aftph	exon	ENSMUSG00000049659	ProperStrand	9	chr9	15119676	15119766	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-6.2797
chr18	38409560	38409660	lincRNA	1700086O06Rik	exon	ENSMUSG00000086988	ProperStrand	2	chr3	88166001	88166074	protein_coding	Smg5	utr3	ENSMUSG00000001415	ProperStrand	70	1	-inf
chr2	3244290	3244390	protein_coding	Nmt2	utr3	ENSMUSG00000026643	ProperStrand	21	chr17	24665452	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	2	-11.3440
chr11	72503524	72525662	protein_coding	Ankfy1	utr5	ENSMUSG00000020790	ProperStrand	68	chr5	137743893	137744180	protein_coding	Srrt	exon	ENSMUSG00000037364	ProperStrand	31	1	-14.3856
chr7	136800631	136800649	SINE	RSINE1	B4	chr7RSINE1136800606	ProperStrand	216	chr18	52854064	52854081	protein_coding	Gykl1	exon	ENSMUSG00000053624	ProperStrand	18	1	-13.1866
chr2	164659897	164659917	protein_coding	Ctsa	exon	ENSMUSG00000017760	ProperStrand	36	chr5	127728745	127728761	protein_coding	Tmem132c	intron	ENSMUSG00000034324	ProperStrand	25	1	-16.1301
mmu-miR-6240	2	21	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr9	105355107	105355881	protein_coding	Atp2c1	exon	ENSMUSG00000032570	ProperStrand	21	1	-8.0023
mmu-miR-6240	3	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr12	29316636	29318690	protein_coding	Rps7	exon	ENSMUSG00000061477	ProperStrand	129	1	-4.4216
chr11	115661296	115661354	protein_coding	Caskin2	utr3	ENSMUSG00000034471	ProperStrand	17	chr1	162967505	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	5	-21.1818
chr7	148195715	148195758	protein_coding	Ifitm3	exon	ENSMUSG00000025492	ProperStrand	12	chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	1	-12.7698
chr19	42028164	42028242	protein_coding	Mms19	exon	ENSMUSG00000025159	ProperStrand	52	chr10	79861990	79862023	protein_coding	Mbd3	utr5	ENSMUSG00000035478	ProperStrand	27	5	-19.5089
chr7	5048813	5048833	protein_coding	Epn1	exon	ENSMUSG00000035203	ProperStrand	15	chr19	46080183	46080199	protein_coding	Hps6	exon	ENSMUSG00000074811	NonProperStrand	45	1	-16.7241
chr8	91343853	91343872	DNA	Charlie10	MER1_type	chr8Charlie1091343828	ProperStrand	23	chr8	125913629	125913682	protein_coding	Tcf25	exon	ENSMUSG00000001472	ProperStrand	66	1	-15.0523
chr4	8679373	8679463	protein_coding	Chd7	exon	ENSMUSG00000041235	ProperStrand	80	chr7	91031977	91032057	protein_coding	Mesdc1	utr5	ENSMUSG00000070462	ProperStrand	19	1	-15.0641
chr7	28146782	28146798	protein_coding	Spnb4	exon	ENSMUSG00000011751	NonProperStrand	84	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-6.2588
chr2	174171838	174171873	protein_coding	Gnas	utr3	ENSMUSG00000027523	ProperStrand	41	chr16	23110455	23110526	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.1317
chr12	117641454	117641470	LTR	RLTR6-int	ERV1	chr12RLTR6-int117641117	ProperStrand	19	chr13	22006727	22006776	tRNA	tRNA85-LeuCAA	.	1311870	ProperStrand	54	1	-15.8666
chr19	40985992	40986013	protein_coding	Zfp518a	utr5	ENSMUSG00000049164	ProperStrand	9	chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	1	-13.3739
chr5	36226512	36226528	protein_coding	Ablim2	utr3	ENSMUSG00000029095	ProperStrand	36	chr18	84377781	84377834	protein_coding	Zfp407	utr3	ENSMUSG00000048410	ProperStrand	34	1	-15.4779
chr14	27237661	27237680	protein_coding	Slmap	exon	ENSMUSG00000021870	ProperStrand	9	chr1	53219102	53219119	protein_coding	1700019A02Rik	intron	ENSMUSG00000060715	ProperStrand	23	1	-18.4712
chr17	4082093	4082154	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr18	63109676	63109692	protein_coding	Apcdd1	exon	ENSMUSG00000071847	NonProperStrand	254	1	-7.0874
chr9	118976669	118977441	protein_coding	Vill	exon	ENSMUSG00000038775	ProperStrand	4	chr10	79843370	79843393	protein_coding	Mex3d	utr3	ENSMUSG00000048696	ProperStrand	14	1	-inf
chr5	22383290	22383310	protein_coding	Lhfpl3	intron	ENSMUSG00000058361	ProperStrand	14	chr3	108357406	108357426	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-7.4293
chrX	83547356	83547372	protein_coding	Mageb4	intron	ENSMUSG00000035427	NonProperStrand	191	chr3	108357354	108357390	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-2.4320
chr9	82900388	82900405	DNA	Kanga11a	Tc2	chr9Kanga11a82900127	ProperStrand	6	chr2	90235315	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	1	-9.1372
chr4	55543160	55543250	protein_coding	Klf4	exon	ENSMUSG00000003032	ProperStrand	64	chr8	129468751	129468831	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	3	-10.3437
chr1	152270659	152270739	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	chr19	8895155	8895187	protein_coding	Hnrnpul2	exon	ENSMUSG00000071659	ProperStrand	93	1	-8.0318
chr19	43579408	43579425	protein_coding	Got1	intron	ENSMUSG00000025190	NonProperStrand	147	chr10	79619892	79619971	protein_coding	Midn	utr3	ENSMUSG00000035621	ProperStrand	36	1	-12.5468
chr3	41296604	41296658	lincRNA	C430002E04Rik	intron	ENSMUSG00000091878	ProperStrand	5	chr11	69481333	69481430	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	3	-18.6946
chr2	26767046	26767583	protein_coding	Rpl7a	exon	ENSMUSG00000062647	ProperStrand	234	chr9	64024486	64024566	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	1	-5.6731
chr17	69581006	69581023	protein_coding	Epb4.1l3	intron	ENSMUSG00000024044	ProperStrand	28	chr16	23110962	23110999	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.1386
chr14	28750350	28750369	protein_coding	Erc2	intron	ENSMUSG00000040640	NonProperStrand	10	chr9	120039578	120039678	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-11.1496
chr14	26705735	26705834	protein_coding	Anxa11	utr3	ENSMUSG00000021866	ProperStrand	30	chr5	130300516	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.7596
chr4	21796739	21797500	protein_coding	Sfrs18	exon	ENSMUSG00000028248	ProperStrand	36	chr10	23505166	23505256	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.9992
chr7	116664812	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	chr5	23358027	23358057	snoRNA	ENSMUSG00000093321_Snord93	.	ENSMUSG00000093321	ProperStrand	218	2	-1.4422
chr11	100946341	100946394	protein_coding	Coasy	exon	ENSMUSG00000001755	ProperStrand	3	chr10	23505172	23505262	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-inf
chr3	14565743	14565762	protein_coding	Lrrcc1	exon	ENSMUSG00000027550	ProperStrand	39	chr11	57856087	57856110	protein_coding	Larp1	exon	ENSMUSG00000037331	ProperStrand	201	1	-11.7572
chr11	42440243	42440259	protein_coding	Gabrb2	exon	ENSMUSG00000007653	ProperStrand	248	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-8.8433
chr9	63042015	63042031	protein_coding	Map2k5	exon	ENSMUSG00000058444	ProperStrand	193	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-9.3435
chr4	98403769	98403833	protein_coding	L1td1	exon	ENSMUSG00000087166	ProperStrand	43	chr9	15119680	15119771	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.2218
chrX	91781363	91781489	protein_coding	Maged1	exon	ENSMUSG00000025151	ProperStrand	43	chr12	29318672	29319081	protein_coding	Rps7	exon	ENSMUSG00000061477	ProperStrand	129	1	-12.4507
chr5	122435195	122488722	protein_coding	Cux2	intron	ENSMUSG00000042589	ProperStrand	8	chr16	23110864	23110983	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-5.7082
chr7	125879777	125879851	protein_coding	6330503K22Rik	utr3	ENSMUSG00000033904	ProperStrand	25	chr17	24857801	24857849	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.8692
chr7	29244465	29244482	protein_coding	Lrfn1	exon	ENSMUSG00000030600	ProperStrand	19	chr17	23954363	23954432	protein_coding	Srrm2	utr3	ENSMUSG00000039218	ProperStrand	521	1	-11.3170
chr5	103854542	103891155	protein_coding	Ptpn13	utr5	ENSMUSG00000034573	NonProperStrand	74	chr16	23110828	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-1.0172
chr12	107067450	107067486	protein_coding	Papola	exon	ENSMUSG00000021111	ProperStrand	67	chr2	130101259	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	3	-14.5641
chr14	75707106	75707173	protein_coding	Zc3h13	intron	ENSMUSG00000022000	ProperStrand	42	chr7	116663658	116663758	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.1409
chr15	25710763	25710853	protein_coding	Myo10	exon	ENSMUSG00000022272	ProperStrand	168	chr7	116663636	116663716	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-0.9650
chr1	16093346	16093611	protein_coding	Rpl7	exon	ENSMUSG00000043716	ProperStrand	93	chr7	117189957	117190037	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	3	-6.7073
chr2	89368462	89368480	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	chr11	97642951	97643090	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	6	-5.1574
chr7	87679949	87679965	protein_coding	Blm	utr5	ENSMUSG00000030528	NonProperStrand	19	chr16	23110828	23110902	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7016
chr13	55710627	55710649	protein_coding	B4galt7	exon	ENSMUSG00000021504	ProperStrand	6	chr2	118432419	118435600	protein_coding	Bub1b	exon	ENSMUSG00000040084	ProperStrand	45	3	-18.9999
chr2	26494826	26494875	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr2	157119950	157120991	protein_coding	Rpn2	exon	ENSMUSG00000027642	ProperStrand	363	1	-2.7976
chr9	57809132	57809149	protein_coding	Sema7a	exon	ENSMUSG00000038264	ProperStrand	43	chr7	148446924	148446974	protein_coding	Phrf1	exon	ENSMUSG00000038611	ProperStrand	86	1	-13.2647
chr7	134341340	134341357	protein_coding	Tbc1d10b	utr3	ENSMUSG00000042492	ProperStrand	187	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-3.0776
chr14	64119054	64119079	protein_coding	Tdh	exon	ENSMUSG00000021953	ProperStrand	67	chr4	131908809	131908874	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-2.1171
chr15	82980074	82980225	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr2	91436245	91436336	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	4	-6.8661
chr13	114411934	114411952	Unknown	CYRA11_Mm	Y-chromosome	chr13CYRA11_Mm114411918	NonProperStrand	7	chr2	180409747	180409804	protein_coding	Dido1	exon	ENSMUSG00000038914	ProperStrand	81	1	-17.1759
chr7	118220237	118220253	protein_coding	Eif4g2	exon	ENSMUSG00000005610	ProperStrand	134	chr4	131865927	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.4603
chr18	33987797	33988394	protein_coding	Epb4.1l4a	exon	ENSMUSG00000024376	ProperStrand	16	chr16	23111392	23111449	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-8.8328
chr4	134487122	134487138	protein_coding	Syf2	exon	ENSMUSG00000028821	ProperStrand	7	chr10	99923613	99923629	protein_coding	Tmtc3	exon	ENSMUSG00000036676	NonProperStrand	9	1	-19.9681
chr7	68538156	68538183	LTR	RLTR10-int	ERVK	chr7RLTR10-int68537830	NonProperStrand	1	chr19	5609827	5609844	protein_coding	Kat5	intron	ENSMUSG00000024926	ProperStrand	20	1	-inf
chr19	47726303	47726370	protein_coding	Col17a1	exon	ENSMUSG00000025064	ProperStrand	10	chr2	104504974	104504991	protein_coding	Cstf3	exon	ENSMUSG00000027176	ProperStrand	19	1	-18.9505
chr4	57958035	57963751	protein_coding	Txn1	exon	ENSMUSG00000028367	ProperStrand	31	chr10	23505152	23505232	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-8.4644
chr19	46933593	46943090	protein_coding	Cnnm2	exon	ENSMUSG00000064105	ProperStrand	18	chr7	116663634	116663724	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.7447
chr11	116299345	116299445	protein_coding	Fam100b	exon	ENSMUSG00000050628	ProperStrand	97	chr1	162967543	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-2.6167
chr7	134170524	134170604	Low_complexity	G-rich	Low_complexity	chr7G-rich134170536	NonProperStrand	1	chr7	134170461	134170551	protein_coding	Maz	utr5	ENSMUSG00000030678	ProperStrand	42	1	-inf
chr1	10902954	10903044	LINE	L1Md_F2	L1	chr1L1Md_F210902747	NonProperStrand	1	chr14	34780913	34780993	protein_coding	Zfp488	utr3	ENSMUSG00000044519	ProperStrand	54	1	-inf
chr17	35152581	35152671	protein_coding	Vars	exon	ENSMUSG00000007029	ProperStrand	121	chr5	74489584	74489664	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-2.5196
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr2	102290960	102290977	protein_coding	Fjx1	exon	ENSMUSG00000075012	ProperStrand	13	1	-8.9859
chr1	129999953	129999970	protein_coding	R3hdm1	utr5	ENSMUSG00000056211	ProperStrand	43	chr10	90581102	90581192	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-5.4550
chr4	108278918	108278934	protein_coding	Orc1	exon	ENSMUSG00000028587	ProperStrand	161	chr10	69467575	69467655	protein_coding	Ank3	exon	ENSMUSG00000069601	ProperStrand	76	1	-10.8574
chr15	98604924	98606960	protein_coding	Wnt10b	exon	ENSMUSG00000022996	NonProperStrand	189	chr5	151755616	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	2	-8.9520
chr11	96133153	96133172	protein_coding	Hoxb9	exon	ENSMUSG00000020875	NonProperStrand	22	chr5	121655016	121655039	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.6854
chr17	88595041	88595058	LTR	ERVL-B4-int	ERVL	chr17ERVL-B4-int88594316	NonProperStrand	1	chr4	131908689	131908708	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-inf
chr4	43505826	43505859	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr17	34741745	34741763	protein_coding	Agpat1	intron	ENSMUSG00000034254	NonProperStrand	39	1	-3.8628
chr5	137521884	137521908	protein_coding	Ap1s1	utr5	ENSMUSG00000004849	ProperStrand	16	chr7	19639791	19639885	protein_coding	Sympk	utr3	ENSMUSG00000023118	ProperStrand	43	3	-inf
chr13	98268975	98269086	LTR	MTEb	MaLR	chr13MTEb98268809	NonProperStrand	4	chr2	144116367	144116385	LTR	MLT2B2	ERVL	chr2MLT2B2144116217	NonProperStrand	17	4	-inf
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr5	74489564	74489681	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	9	-5.3980
chr15	47477091	47477108	protein_coding	Csmd3	exon	ENSMUSG00000022311	NonProperStrand	25	chr3	108357359	108357499	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-6.2553
chr13	39052372	39052388	protein_coding	Slc35b3	utr5	ENSMUSG00000021432	ProperStrand	27	chr16	23110912	23110940	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.1875
chr16	62900544	62900562	protein_coding	Pros1	intron	ENSMUSG00000022912	ProperStrand	20	chr7	116664841	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-4.5800
chr2	129094341	129094424	protein_coding	Ckap2l	utr3	ENSMUSG00000048327	ProperStrand	16	chr7	148634701	148634791	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-6.5767
chr12	102199929	102199985	protein_coding	Ccdc88c	intron	ENSMUSG00000021182	ProperStrand	151	chr6	87769189	87769558	protein_coding	Isy1	exon	ENSMUSG00000030056	ProperStrand	172	1	-9.3496
chr11	6013138	6013233	protein_coding	Nudcd3	intron	ENSMUSG00000053838	ProperStrand	26	chr13	17078842	17078863	protein_coding	5033411D12Rik	intron	ENSMUSG00000055137	NonProperStrand	23	2	-18.8242
chr2	29035610	29035710	protein_coding	Setx	utr3	ENSMUSG00000043535	ProperStrand	187	chr4	122968665	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-4.0837
chr2	48902241	48927407	protein_coding	Mbd5	intron	ENSMUSG00000036792	NonProperStrand	25	chr5	108334195	108334245	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	2	-10.6158
chr3	153991597	153991614	protein_coding	Lhx8	utr5	ENSMUSG00000093486	NonProperStrand	47	chr3	153574604	153574634	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	1	-10.1660
chr16	57391761	57391795	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr2	48760556	48760572	protein_coding	Orc4	utr3	ENSMUSG00000026761	ProperStrand	95	1	-6.8791
chr13	76341035	76341055	protein_coding	Fam81b	intron	ENSMUSG00000078966	NonProperStrand	220	chr5	74489555	74489586	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-1.5615
chr19	59150230	59150247	protein_coding	4930506M07Rik	utr5	ENSMUSG00000041362	NonProperStrand	21	chr1	36750085	36750152	protein_coding	Cox5b	exon	ENSMUSG00000061518	ProperStrand	43	4	-inf
chr11	97579950	97579966	protein_coding	Pip4k2b	utr3	ENSMUSG00000018547	NonProperStrand	10	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	2	-15.1303
chr7	114608194	114608284	protein_coding	Syt9	intron	ENSMUSG00000062542	NonProperStrand	6	chr10	25756553	25756643	protein_coding	Tmem200a	intron	ENSMUSG00000092001	NonProperStrand	5	1	-19.0115
chr2	43110993	43111010	LINE	Lx6	L1	chr2Lx643110257	ProperStrand	35	chr16	23111373	23111429	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.0755
chr10	85508228	85508244	protein_coding	Fbxo7	intron	ENSMUSG00000001786	ProperStrand	13	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.5141
chr17	32964611	32964647	LINE	L1_Mus1	L1	chr17L1_Mus132964539	ProperStrand	1	chr2	158182156	158182191	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-inf
chr6	51494737	51519821	protein_coding	Snx10	utr5	ENSMUSG00000038301	ProperStrand	9	chr16	23110874	23110954	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.9939
chr9	95168822	95168912	LINE	L2c	L2	chr9L2c95168848	NonProperStrand	1	chr9	95168694	95168774	SINE	B1_Mm	Alu	chr9B1_Mm95168609	NonProperStrand	1	1	-inf
chr19	8799361	8799433	snoRNA	ENSMUSG00000065280_SNORD28	.	ENSMUSG00000065280	ProperStrand	269	chr3	68889026	68889126	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-0.9084
chr3	37750806	37750824	LINE	L1_Mus3	L1	chr3L1_Mus337750762	ProperStrand	38	chr3	34550902	34550933	protein_coding	Sox2	utr3	ENSMUSG00000074637	ProperStrand	299	1	-11.0155
chr12	111930587	111932501	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr9	120039540	120039677	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	6	-2.4718
chr9	64024465	64024551	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	chr10	110918553	110918643	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	12	-10.1433
chr11	69478034	69478134	protein_coding	Cd68	intron	ENSMUSG00000018774	NonProperStrand	1	chr4	131908689	131908726	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-inf
chr5	143734697	143734736	protein_coding	Fscn1	utr3	ENSMUSG00000029581	ProperStrand	200	chr9	15119729	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-0.8394
chr17	36192788	36192868	antisense	BC023719	.	ENSMUSG00000092365	ProperStrand	1	chr2	131744018	131744108	protein_coding	Prnd	intron	ENSMUSG00000027338	ProperStrand	5	1	-inf
chrX	98475986	98476020	protein_coding	Med12	exon	ENSMUSG00000079487	ProperStrand	79	chr5	130295494	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	3	-11.2021
chr5	133017404	133017462	protein_coding	Auts2	exon	ENSMUSG00000029673	ProperStrand	71	chr11	57965054	57965074	protein_coding	Gemin5	exon	ENSMUSG00000037275	ProperStrand	33	1	-14.1746
chr17	15653801	15653868	protein_coding	Tbp	utr3	ENSMUSG00000014767	ProperStrand	8	chr7	148290254	148290270	protein_coding	Ano9	exon	ENSMUSG00000054662	ProperStrand	3	1	-21.9894
chr19	17295810	17295895	protein_coding	Prune2	utr3	ENSMUSG00000039126	ProperStrand	49	chr5	108334264	108336493	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-5.2741
chr11	62590602	62590630	snoRNA	ENSMUSG00000064692_SNORA67	.	ENSMUSG00000064692	ProperStrand	185	chr5	121655029	121655129	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-1.7991
chr17	35643289	35643400	protein_coding	Pou5f1	exon	ENSMUSG00000024406	ProperStrand	104	chr4	131908236	131908318	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-1.4983
chr10	80606900	80606916	protein_coding	Zbtb7a	exon	ENSMUSG00000035011	NonProperStrand	2	chr4	131908752	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-8.0336
chr17	45730371	45730461	protein_coding	Slc29a1	utr5	ENSMUSG00000023942	ProperStrand	95	chr1	89673597	89673677	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-2.4539
chr4	148502582	148502641	protein_coding	Apitd1	utr3	ENSMUSG00000073705	ProperStrand	2	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr9	65914164	65914264	protein_coding	Ppib	utr3	ENSMUSG00000032383	ProperStrand	31	chr12	102278756	102278832	protein_coding	Smek1	utr3	ENSMUSG00000041846	ProperStrand	66	1	-14.4510
chr16	62900165	62900202	protein_coding	Pros1	exon	ENSMUSG00000022912	ProperStrand	20	chr15	5068430	5068478	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-8.2676
chr17	37141343	37141394	protein_coding	Zfp57	utr5	ENSMUSG00000036036	ProperStrand	39	chr7	86493245	86495652	protein_coding	Abhd2	exon	ENSMUSG00000039202	ProperStrand	47	1	-14.6764
chrX	147483674	147483693	protein_coding	Fgd1	intron	ENSMUSG00000025265	NonProperStrand	9	chr10	75322283	75322447	protein_coding	Mif	exon	ENSMUSG00000033307	ProperStrand	146	1	-15.4091
chr9	37312946	37312974	protein_coding	BC024479	intron	ENSMUSG00000042138	ProperStrand	17	chr4	131908689	131908746	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.3002
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr1	88426041	88426080	protein_coding	Ptma	exon	ENSMUSG00000026238	ProperStrand	385	1	-5.1219
chr6	51419751	51419797	protein_coding	Hnrnpa2b1	utr5	ENSMUSG00000004980	ProperStrand	166	chr4	131908320	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-0.7277
chr18	75161108	75161140	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	chr14	76372336	76372426	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	1	-4.7675
chr11	50230494	50230557	protein_coding	Rufy1	intron	ENSMUSG00000020375	ProperStrand	3	chr16	23111754	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-7.8619
chr15	89125615	89125652	protein_coding	Sbf1	exon	ENSMUSG00000036529	ProperStrand	85	chr2	79843543	79843559	protein_coding	Pde1a	intron	ENSMUSG00000059173	NonProperStrand	275	1	-9.5625
chr12	86097623	86106241	protein_coding	Npc2	utr3	ENSMUSG00000021242	ProperStrand	29	chr16	23111413	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-4.2647
chr11	69821824	69821876	protein_coding	Dvl2	exon	ENSMUSG00000020888	ProperStrand	94	chr6	113284585	113284601	protein_coding	Camk1	exon	ENSMUSG00000030272	ProperStrand	13	1	-15.5048
chr6	104769559	104769649	protein_coding	Cntn6	intron	ENSMUSG00000030092	ProperStrand	7	chr7	54442473	54442563	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	1	-16.0422
chr3	96363690	96363752	protein_coding	Txnip	exon	ENSMUSG00000038393	ProperStrand	172	chr10	110918618	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	4	-6.6241
chr7	111488603	111488619	protein_coding	Trim12c	utr3	ENSMUSG00000057143	ProperStrand	28	chr16	23110916	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-3.6312
chr8	114292639	114292672	protein_coding	Cfdp1	exon	ENSMUSG00000031954	ProperStrand	32	chr9	120038477	120038551	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.2048
chr15	48531858	48623489	protein_coding	Csmd3	utr5	ENSMUSG00000022311	ProperStrand	23	chr16	23110827	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-10.5213
chrX	34622906	34623021	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	chr5	23358024	23358056	snoRNA	ENSMUSG00000093321_Snord93	.	ENSMUSG00000093321	ProperStrand	218	1	-1.1113
chr9	78326377	78326650	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	2	-2.9699
chr10	70756461	70756551	SINE	B4	B4	chr10B470756360	NonProperStrand	1	chr10	70756561	70756651	Simple_repeat	(CA)n	Simple_repeat	chr10(CA)n70756558	NonProperStrand	1	1	-inf
chr1	71699918	71699934	protein_coding	Apol7d	exon	ENSMUSG00000073652	ProperStrand	1	chr16	23110911	23110966	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr12	60774058	60774110	snoRNA	ENSMUSG00000077603_SNORA3	.	ENSMUSG00000077603	ProperStrand	185	chr11	69483231	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-0.8082
chrX	133268565	133268595	protein_coding	Morf4l2	exon	ENSMUSG00000031422	ProperStrand	113	chr8	73419728	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.0439
chr4	151679037	151679054	protein_coding	Icmt	utr3	ENSMUSG00000039662	ProperStrand	48	chr10	23505155	23505221	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.5517
chr11	106114264	106114412	protein_coding	Ftsj3	exon	ENSMUSG00000020706	ProperStrand	64	chr14	119323691	119323732	protein_coding	Dzip1	utr5	ENSMUSG00000042156	ProperStrand	7	3	-20.9490
chrX	165695583	165695599	protein_coding	Arhgap6	exon	ENSMUSG00000031355	ProperStrand	74	chr11	68886974	68887033	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-3.7505
chr7	16524291	16524509	protein_coding	Gltscr2	exon	ENSMUSG00000041560	ProperStrand	127	chr8	113366285	113366320	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	1	-7.6816
chr5	100855901	100855974	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr8	113447131	113447171	protein_coding	St3gal2	intron	ENSMUSG00000031749	ProperStrand	206	4	-13.5562
chr19	12870380	12870470	protein_coding	Zfp91	utr5	ENSMUSG00000024695	ProperStrand	16	chr16	23110865	23110945	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.9771
chr1	75484537	75484553	protein_coding	Obsl1	exon	ENSMUSG00000026211	NonProperStrand	192	chr15	82686612	82686682	protein_coding	Tcf20	exon	ENSMUSG00000041852	ProperStrand	658	1	-6.2139
chr2	152976755	152976813	protein_coding	Hck	exon	ENSMUSG00000003283	ProperStrand	8	chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	1	-12.6378
chr11	113523870	113523887	protein_coding	Cog1	utr3	ENSMUSG00000018661	ProperStrand	51	chr11	97642952	97643033	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.7531
chr15	79746477	79747907	protein_coding	Cbx7	utr3	ENSMUSG00000053411	ProperStrand	62	chr16	23111391	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	11	-21.5555
chr6	125271585	125271601	protein_coding	Scnn1a	utr5	ENSMUSG00000030340	ProperStrand	10	chr16	23110530	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.8693
chr4	118294102	118294738	protein_coding	Ebna1bp2	exon	ENSMUSG00000028729	ProperStrand	18	chr16	23111695	23111768	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.0433
chr13	55927617	55927635	protein_coding	Pitx1	exon	ENSMUSG00000021506	NonProperStrand	2	chr2	84886581	84886804	protein_coding	Ssrp1	exon	ENSMUSG00000027067	ProperStrand	118	1	-20.1031
chr1	138741541	138741619	protein_coding	Nr5a2	utr3	ENSMUSG00000026398	ProperStrand	43	chr2	145076805	145209253	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	2	-13.3729
chr6	97497429	97497468	snoRNA	ENSMUSG00000064724_SNORA63	.	ENSMUSG00000064724	ProperStrand	35	chr3	68889027	68889147	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-4.2628
chr13	103895241	103895257	protein_coding	Mast4	intron	ENSMUSG00000034751	ProperStrand	150	chrX	84483712	84483760	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-6.4294
chr7	150951084	150951100	protein_coding	Mrgprg	exon	ENSMUSG00000050276	NonProperStrand	8	chr3	123210951	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.8655
chr9	54768317	54768333	protein_coding	Agphd1	exon	ENSMUSG00000035878	NonProperStrand	19	chr7	116663634	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.6387
chr7	52840917	52843088	protein_coding	Bcat2	exon	ENSMUSG00000030826	ProperStrand	24	chr2	26493366	26493414	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-5.5073
chr19	13345120	13345137	LINE	L1_Mur2	L1	chr19L1_Mur213344851	NonProperStrand	5	chr11	95834368	95834401	protein_coding	Igf2bp1	exon	ENSMUSG00000013415	ProperStrand	140	1	-16.6894
chr11	24069677	24069694	protein_coding	Bcl11a	intron	ENSMUSG00000000861	ProperStrand	30	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-12.1649
chr2	167332302	167332322	protein_coding	Rnf114	intron	ENSMUSG00000006418	ProperStrand	18	chr11	116535914	116535982	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	1	-8.3236
chr6	142211245	142214830	protein_coding	Slco1a5	exon	ENSMUSG00000063975	NonProperStrand	38	chr1	162967489	162967521	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.3319
chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	chr19	8799847	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-3.4182
chr4	132530098	132530117	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	chr17	35088970	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	2	-4.2655
chr6	56782209	56782295	protein_coding	Fkbp9	exon	ENSMUSG00000029781	ProperStrand	39	chr18	80403573	80403589	protein_coding	Txnl4a	utr5	ENSMUSG00000057130	ProperStrand	44	1	-14.8140
chr7	82264957	82268904	protein_coding	Sv2b	exon	ENSMUSG00000053025	ProperStrand	9	chr3	123210918	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.6210
chr4	140803302	140803318	protein_coding	Arhgef19	exon	ENSMUSG00000028919	NonProperStrand	12	chr16	23110852	23110942	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-4.4633
chr1	16609391	16609408	protein_coding	Ube2w	utr5	ENSMUSG00000025939	ProperStrand	6	chr4	131908356	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-9.5081
chr17	17665996	17666026	protein_coding	Lnpep	utr3	ENSMUSG00000023845	ProperStrand	23	chr12	106269282	106269382	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-6.0077
chr2	90235285	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	117166721	117166860	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	62	-inf
chr11	21203973	21204053	protein_coding	Vps54	intron	ENSMUSG00000020128	NonProperStrand	1	chr11	4819695	4819786	protein_coding	Thoc5	utr3	ENSMUSG00000034274	NonProperStrand	3	1	-inf
chr17	56536057	56536326	protein_coding	Kdm4b	exon	ENSMUSG00000024201	ProperStrand	45	chr18	35716811	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-9.5135
chr2	89368462	89368480	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	chr4	131866156	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-2.3554
chr11	62416572	62418034	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr18	35716736	35716886	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	32	-21.2903
chr17	56716118	56716222	protein_coding-noncoding	Safb2	utr3	ENSMUSG00000042625	ProperStrand	2	chr16	23110986	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr4	120216385	120216409	protein_coding	Ctps	exon	ENSMUSG00000028633	ProperStrand	19	chr11	80415108	80415125	protein_coding	Myo1d	exon	ENSMUSG00000035441	ProperStrand	144	1	-13.8914
chr7	25775546	25779192	protein_coding	Atp1a3	exon	ENSMUSG00000040907	ProperStrand	66	chr9	15119966	15120036	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-7.0635
chr5	23247035	23247097	protein_coding	Pus7	utr3	ENSMUSG00000057541	ProperStrand	23	chr1	162965997	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-8.9630
chr17	56556305	56556405	protein_coding	Ptprs	exon	ENSMUSG00000013236	ProperStrand	152	chr1	162967531	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-1.8741
chr3	86616310	86616332	protein_coding	Dclk2	intron	ENSMUSG00000028078	NonProperStrand	4	chr16	23110828	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.6489
chr11	7113889	7113905	protein_coding	Igfbp3	utr5	ENSMUSG00000020427	ProperStrand	1	chr7	118219696	118219742	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-inf
chr13	35069853	35069900	protein_coding	Eci2	exon	ENSMUSG00000021417	ProperStrand	6	chr2	26768407	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-10.3188
chr8	87525135	87525238	protein_coding	Hook2	exon	ENSMUSG00000052566	ProperStrand	204	chr5	130300419	130300479	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-0.7386
chr1	53409486	53409502	protein_coding	Asnsd1	utr5	ENSMUSG00000026095	NonProperStrand	105	chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	1	-10.5612
chr9	122077554	122077581	protein_coding	Snrk	utr3	ENSMUSG00000038145	ProperStrand	6	chr16	23110941	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-10.1290
chr4	141696103	141696124	protein_coding	Kazn	utr3	ENSMUSG00000040606	ProperStrand	123	chr11	69481333	69481466	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	6	-12.2205
chrX	71517822	71517961	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	chr16	23111696	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	50	-18.6734
chr15	103070920	103071561	protein_coding	Hnrnpa1	exon	ENSMUSG00000046434	ProperStrand	68	chr5	130300421	130300501	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.2975
chr3	27241615	27241631	LTR	MTEb	MaLR	chr3MTEb27241591	ProperStrand	1	chr4	131908809	131908882	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-inf
chr9	26440743	26440759	DNA	MER5A	MER1_type	chr9MER5A26440741	ProperStrand	108	chr11	106362342	106362378	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-4.7010
chr1	99558430	99558446	protein_coding	D1Ertd622e	exon	ENSMUSG00000044768	ProperStrand	5	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-10.3095
chr15	100358955	100358972	protein_coding	Tfcp2	exon	ENSMUSG00000009733	NonProperStrand	77	chr1	88252839	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-6.1474
chr7	138459653	138459669	protein_coding	Cuzd1	exon	ENSMUSG00000040205	NonProperStrand	59	chr2	32818803	32818900	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-5.5036
chr8	96696761	96697077	protein_coding	Mt2	exon	ENSMUSG00000031762	ProperStrand	71	chr11	69481342	69481432	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-2.8992
chr19	13701931	13702021	LINE	L1Md_F2	L1	chr19L1Md_F213701131	ProperStrand	1	chr7	54442353	54442433	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-inf
chr3	133535339	133535429	LINE	Lx	L1	chr3Lx133534629	ProperStrand	2	chr3	5550070	5550150	LINE	Lx3_Mus	L1	chr3Lx3_Mus5550050	ProperStrand	2	2	-inf
chr7	97125466	97125525	protein_coding	Eed	exon	ENSMUSG00000030619	ProperStrand	13	chr9	114424950	114434091	protein_coding	Trim71	exon	ENSMUSG00000079259	ProperStrand	162	1	-14.4449
chr18	37897867	37897884	protein_coding	Pcdhga9	exon	ENSMUSG00000023036	ProperStrand	245	chr2	22444728	22444864	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-5.0101
chr15	89806995	89807085	LINE	L1MEg	L1	chr15L1MEg89806925	ProperStrand	1	chr15	89807667	89807757	LINE	Lx3B	L1	chr15Lx3B89807411	ProperStrand	1	1	-inf
chr14	77424372	77424388	protein_coding	9030625A04Rik	utr3	ENSMUSG00000044350	NonProperStrand	152	chrX	84483699	84483726	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-6.4033
chr1	183853750	183853767	protein_coding	Enah	exon	ENSMUSG00000022995	NonProperStrand	33	chr8	129468745	129468879	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	4	-17.0660
chr11	106853306	106853393	protein_coding	Kpna2	exon	ENSMUSG00000018362	ProperStrand	70	chr9	15118322	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-5.4734
chr3	98117252	98117340	protein_coding	Phgdh	exon	ENSMUSG00000053398	ProperStrand	46	chr2	32818804	32818894	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-5.9925
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr8	96696709	96696768	protein_coding	Mt2	utr5	ENSMUSG00000031762	ProperStrand	71	1	-6.0371
chr3	136526736	136526753	protein_coding	Ppp3ca	intron	ENSMUSG00000028161	NonProperStrand	120	chr1	82287843	82287859	protein_coding	Irs1	utr5	ENSMUSG00000055980	NonProperStrand	3	1	-18.3558
chr7	134671414	134671504	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	chr1	89681247	89681327	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-0.8354
chr3	110797203	110797293	LINE	L1_Mus3	L1	chr3L1_Mus3110795227	NonProperStrand	1	chr8	83817812	83817892	LINE	Lx	L1	chr8Lx83817220	NonProperStrand	1	1	-inf
chr1	99651776	99652542	protein_coding	Ppip5k2	exon	ENSMUSG00000040648	ProperStrand	35	chr8	32260358	32260424	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-5.6795
chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	chr1	9932585	9932624	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-3.7299
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr7	28443911	28443927	protein_coding	Map3k10	exon	ENSMUSG00000040390	NonProperStrand	21	1	-10.7160
chr13	23392049	23392066	lincRNA	4930557F10Rik	intron	ENSMUSG00000085488	NonProperStrand	51	chr6	122271989	122272048	protein_coding	Phc1	exon	ENSMUSG00000040669	ProperStrand	158	1	-11.6980
chr5	145532304	145532394	protein_coding	Trrap	intron	ENSMUSG00000045482	ProperStrand	399	chr5	74489543	74489623	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	16	-19.6227
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr1	162966814	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	2	-1.8874
chr2	127416800	127416900	protein_coding	Mrps5	intron	ENSMUSG00000027374	ProperStrand	84	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.9813
chr2	91436245	91436339	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	chr12	106269476	106269557	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	3	-0.7610
chr5	50589928	50589947	LTR	MER34A1	ERV1	chr5MER34A150589903	NonProperStrand	3	chr11	97642970	97643090	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-inf
chr10	109640049	109640066	SINE	RSINE1	B4	chr10RSINE1109639979	ProperStrand	51	chr8	87460792	87460809	protein_coding	Mast1	intron	ENSMUSG00000053693	ProperStrand	16	1	-16.3713
chr4	25547379	25547401	protein_coding	Fut9	exon	ENSMUSG00000055373	ProperStrand	10	chr5	108336422	108336492	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	3	-19.1209
chr18	35776080	35776096	protein_coding	Paip2	utr3	ENSMUSG00000037058	ProperStrand	15	chr15	98350146	98350283	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	2	-12.1271
chr19	55401096	55401113	protein_coding	Vti1a	intron	ENSMUSG00000024983	NonProperStrand	62	chr19	8798740	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-4.7379
chr16	93900383	93901212	protein_coding	Chaf1b	exon	ENSMUSG00000022945	ProperStrand	28	chr3	108357423	108357503	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-6.0293
chr11	77316863	77316880	protein_coding	Git1	exon	ENSMUSG00000011877	ProperStrand	95	chr4	155366536	155366553	protein_coding	B3galt6	exon	ENSMUSG00000050796	ProperStrand	40	1	-13.2094
chr2	163232166	163232238	protein_coding	3230401D17Rik	exon	ENSMUSG00000035399	ProperStrand	5	chr7	25298727	25298819	protein_coding	Zfp428	intron	ENSMUSG00000064264	ProperStrand	23	1	-18.8987
chr5	31117166	31117183	protein_coding	Mapre3	utr5	ENSMUSG00000029166	NonProperStrand	19	chr9	62705194	62705211	pseudogene	Gm10653	.	ENSMUSG00000074250	NonProperStrand	15	1	-19.0680
chr7	30074412	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr4	131908236	131908410	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-1.0104
chr11	51418300	51418965	protein_coding	Hnrnpab	exon	ENSMUSG00000020358	ProperStrand	124	chr6	128384184	128384204	protein_coding	Fkbp4	intron	ENSMUSG00000030357	NonProperStrand	42	1	-12.5755
chr5	5322630	5322646	protein_coding	Cdk14	intron	ENSMUSG00000028926	ProperStrand	20	chr1	88247835	88247876	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-7.2774
chr8	116041186	116041203	LTR	ORR1A2	MaLR	chr8ORR1A2116041073	NonProperStrand	4	chr9	64143747	64143832	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-13.4415
chr11	100414998	100415014	protein_coding	Ttc25	exon	ENSMUSG00000006784	NonProperStrand	119	chr7	52976097	52976148	protein_coding	Rpl18	exon	ENSMUSG00000059070	ProperStrand	116	1	-10.6141
chr9	78023109	78023150	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr15	79249240	79249291	protein_coding	Csnk1e	utr3	ENSMUSG00000022433	ProperStrand	59	1	-5.9108
chrX	148343353	148343447	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	chr7	134279986	134280004	protein_coding	Spn	exon	ENSMUSG00000051457	ProperStrand	9	5	-20.2047
chr8	100761007	100761027	LTR	RMER20B	ERVK	chr8RMER20B100760702	ProperStrand	1	chr2	26494773	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	NonProperStrand	27	1	-inf
chr19	45115847	45115864	protein_coding	Pdzd7	intron	ENSMUSG00000074818	NonProperStrand	5	chr10	23505222	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-5.7809
chr1	158759236	158759252	protein_coding	Ralgps2	exon	ENSMUSG00000026594	ProperStrand	16	chr1	89681320	89681349	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-8.0850
chr16	11144175	11144276	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr15	79913288	79913351	protein_coding	Rpl3	intron	ENSMUSG00000060036	NonProperStrand	7	3	-21.1428
chr5	75473198	75473215	protein_coding	Gsx2	utr3	ENSMUSG00000035946	ProperStrand	307	chr7	36473412	36473457	protein_coding	Dpy19l3	utr3	ENSMUSG00000043671	ProperStrand	9	1	-13.9281
chr5	125599009	125599086	protein_coding	Ncor2	exon	ENSMUSG00000029478	ProperStrand	377	chr1	162965981	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	6	-6.6369
chr8	73419394	73419870	protein_coding	Rpl18a	intron	ENSMUSG00000045128	ProperStrand	394	chr8	73419657	73419789	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	71	-inf
chr5	73701635	73701652	protein_coding	Ociad1	exon	ENSMUSG00000029152	ProperStrand	51	chr4	12072788	12072868	protein_coding	Rbm12b	exon	ENSMUSG00000046667	ProperStrand	2	1	-inf
chr6	88835844	88835877	protein_coding	Mcm2	exon	ENSMUSG00000002870	ProperStrand	83	chr11	69730424	69730482	protein_coding	Eif5a	utr3	ENSMUSG00000078812	ProperStrand	164	1	-10.6433
chr10	12902322	12902670	protein_coding	Ltv1	exon	ENSMUSG00000019814	ProperStrand	76	chr1	72898588	72898677	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	1	-9.0098
chr17	47067383	47069426	protein_coding	Ubr2	exon	ENSMUSG00000023977	ProperStrand	172	chr4	107907648	107907678	protein_coding	Zyg11b	utr3	ENSMUSG00000034636	ProperStrand	11	3	-19.4076
chr8	72322574	72322594	protein_coding	Atp13a1	exon	ENSMUSG00000031862	ProperStrand	75	chr5	115939535	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	3	-16.6243
chr5	110728318	110728408	protein_coding	Pole	exon	ENSMUSG00000007080	ProperStrand	125	chr11	97643001	97643080	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.3224
chr2	114021561	114021627	protein_coding	Zfp770	exon	ENSMUSG00000040321	ProperStrand	18	chr19	8963153	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.4763
chr7	3614439	3614494	protein_coding	Leng1	exon	ENSMUSG00000078813	ProperStrand	5	chr4	131866155	131866245	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	3	-18.7412
chr3	107499264	107499364	protein_coding	Ahcyl1	utr5	ENSMUSG00000027893	ProperStrand	81	chr7	117189991	117190068	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.7950
chr8	47292865	47292920	protein_coding	Slc25a4	exon	ENSMUSG00000031633	ProperStrand	53	chr8	80757269	80757286	protein_coding	Ttc29	intron	ENSMUSG00000037101	ProperStrand	22	1	-15.5939
chr2	26493465	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr2	75744481	75744507	protein_coding	Agps	intron	ENSMUSG00000042410	ProperStrand	22	1	-8.2032
chr6	52589226	52589337	snoRNA	ENSMUSG00000064792_SNORA32	.	ENSMUSG00000064792	ProperStrand	151	chr2	166890560	166890581	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-5.7345
chr11	94188661	94188684	Simple_repeat	(CCCCG)n	Simple_repeat	chr11(CCCCG)n94188658	NonProperStrand	10	chr4	131908319	131908409	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.5892
chr2	12922593	12922609	protein_coding	Pter	utr3	ENSMUSG00000026730	NonProperStrand	5	chr11	102297031	102297158	protein_coding	Grn	exon	ENSMUSG00000034708	ProperStrand	43	1	-19.2672
chr1	75305885	75305958	protein_coding	Dnpep	exon	ENSMUSG00000026209	ProperStrand	18	chr16	23111449	23111505	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-11.3478
chr9	111164007	111164052	protein_coding	Mlh1	exon	ENSMUSG00000032498	ProperStrand	13	chr3	123210854	123210897	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-8.1561
chr12	109512930	109512990	protein_coding	Ccdc85c	exon	ENSMUSG00000084883	ProperStrand	157	chr10	78954127	78954143	protein_coding	Vmn2r83	exon	ENSMUSG00000091381	ProperStrand	6	2	-inf
chr2	129998685	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr3	34549122	34549193	protein_coding	Sox2	utr5	ENSMUSG00000074637	ProperStrand	299	1	-4.9494
chr7	26507279	26507369	protein_coding	Hnrnpul1	exon	ENSMUSG00000040725	ProperStrand	84	chr11	97642997	97643077	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.9168
chr16	5256015	5256031	protein_coding	Fam86	utr5	ENSMUSG00000022544	ProperStrand	231	chr7	108974789	108974854	protein_coding	Inppl1	intron	ENSMUSG00000032737	ProperStrand	272	1	-7.5908
chr12	32003471	32004813	protein_coding	Lamb1	exon	ENSMUSG00000002900	ProperStrand	87	chr5	74489572	74489644	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	2	-5.3336
chr6	91055029	91055061	protein_coding	Nup210	intron	ENSMUSG00000030091	ProperStrand	140	chr10	127020511	127020887	protein_coding	Lrp1	exon	ENSMUSG00000040249	NonProperStrand	24	1	-13.4669
chr7	146684406	146684425	protein_coding	Inpp5a	intron	ENSMUSG00000025477	ProperStrand	166	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.5730
chr1	152219275	152219303	protein_coding	BC003331	exon	ENSMUSG00000006010	ProperStrand	5	chr7	29136553	29136643	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-7.2327
chr6	131314926	131314949	protein_coding	Csda	utr3	ENSMUSG00000030189	ProperStrand	86	chr6	115757992	115758117	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-4.7741
chr5	34828788	34828843	protein_coding	Fam193a	utr3	ENSMUSG00000037210	ProperStrand	41	chr4	131908236	131908285	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.0019
chr6	131338248	131338289	protein_coding	Csda	utr5	ENSMUSG00000030189	ProperStrand	86	chr13	64243617	64243636	protein_coding	Zfp367	exon	ENSMUSG00000044934	NonProperStrand	6	1	-17.2739
chr3	89575966	89576056	protein_coding	4632404H12Rik	intron	ENSMUSG00000042579	ProperStrand	1	chr5	108336365	108336445	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-inf
chr4	49641844	49641863	LTR	RMER19B	ERVK	chr4RMER19B49641582	ProperStrand	1	chr16	23110828	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr5	36851063	36855148	protein_coding	Tbc1d14	exon	ENSMUSG00000029192	ProperStrand	25	chr4	131908254	131908344	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.8464
chr14	56159294	56159312	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	chr19	8800355	8800444	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-1.5334
chr11	75203947	75204037	protein_coding	Smyd4	exon	ENSMUSG00000018809	ProperStrand	11	chr5	108334241	108336489	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-8.2190
chr4	63211294	63211314	protein_coding	Atp6v1g1	utr3	ENSMUSG00000039105	NonProperStrand	24	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-4.1579
chr16	11144105	11144276	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr16	57391615	57391794	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	5	-19.5770
chr11	20548012	20548029	protein_coding	Sertad2	exon	ENSMUSG00000049800	ProperStrand	21	chr1	162966812	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-8.3630
chr13	46765144	46765160	protein_coding	C78339	exon	ENSMUSG00000069237	NonProperStrand	104	chr11	62416601	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-4.1130
chr14	61398407	61398423	protein_coding	C1qtnf9	exon	ENSMUSG00000071347	ProperStrand	187	chr9	120037933	120037968	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-2.6164
chr1	133821199	133824721	protein_coding	Nucks1	exon	ENSMUSG00000026434	ProperStrand	59	chr14	65372814	65372889	snoRNA	ENSMUSG00000064442_SNORA36	.	ENSMUSG00000064442	ProperStrand	296	2	-15.9567
chr2	158185530	158185654	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr5	130295413	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	12	-10.1487
chr3	115617993	115618010	protein_coding	Dph5	exon	ENSMUSG00000033554	NonProperStrand	7	chr5	130300470	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-11.0020
chr9	78327834	78327913	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr1	88247738	88247799	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	5	-1.6604
chr11	116535949	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr7	30041662	30041710	protein_coding	Spint2	utr3	ENSMUSG00000074227	ProperStrand	82	2	-8.6949
chr1	120558643	120579046	protein_coding	Tfcp2l1	utr3	ENSMUSG00000026380	ProperStrand	158	chr4	131908236	131908440	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-2.2635
chr13	110231347	110231365	protein_coding	Pde4d	intron	ENSMUSG00000021699	ProperStrand	92	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-10.8264
chr9	113650862	113650878	protein_coding	Clasp2	exon	ENSMUSG00000033392	ProperStrand	30	chr19	8798740	8798761	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-6.1598
chr16	31261340	31261365	protein_coding	Ppp1r2	exon	ENSMUSG00000047714	ProperStrand	10	chr7	29136542	29136632	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.7572
chr3	95544137	95544227	protein_coding	Tars2	exon	ENSMUSG00000028107	ProperStrand	26	chr7	116663634	116663714	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.0328
chr5	101454126	101454143	LTR	MLT1L	MaLR	chr5MLT1L101454001	ProperStrand	1	chr13	22135241	22135281	protein_coding	Hist1h2bj	exon	ENSMUSG00000069300	ProperStrand	13	1	-inf
chr11	69481326	69481361	protein_coding-noncoding	Eif4a1	utr3	ENSMUSG00000059796	ProperStrand	68	chr2	120996749	120996766	protein_coding	Tubgcp4	intron	ENSMUSG00000027263	ProperStrand	30	1	-14.4683
chr11	78321274	78321833	protein_coding	Tmem199	exon	ENSMUSG00000051232	ProperStrand	6	chr11	98878344	98878380	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-11.0174
chr12	31967581	31970520	protein_coding	Lamb1	exon	ENSMUSG00000002900	ProperStrand	87	chr7	29136525	29136602	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.7631
chr2	90235306	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	24665478	24665558	protein_coding	Rab26	intron	ENSMUSG00000079657	ProperStrand	11	1	-7.8469
chr4	59630986	59631021	protein_coding	Hsdl2	utr3	ENSMUSG00000028383	ProperStrand	4	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-20.0916
chr3	88104735	88104771	protein_coding	Cct3	exon	ENSMUSG00000001416	ProperStrand	82	chr5	108336427	108336496	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-4.2829
chr18	75160711	75160777	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	chr5	108336363	108336408	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-1.3077
chr9	100966289	100966307	SINE	B4A	B4	chr9B4A100966214	ProperStrand	51	chr15	60661083	60661099	lincRNA	9930014A18Rik	exon	ENSMUSG00000044513	ProperStrand	54	1	-13.8579
chr4	43505702	43505823	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr10	62301912	62342040	protein_coding	Tet1	exon	ENSMUSG00000047146	ProperStrand	286	2	-1.4917
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	77742558	77742574	protein_coding	Rasd2	exon	ENSMUSG00000034472	NonProperStrand	237	3	-5.5040
chr7	129303082	129305102	protein_coding	Plk1	exon	ENSMUSG00000030867	ProperStrand	146	chr4	131908320	131908399	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	5	-3.5692
chr8	13760615	13760643	protein_coding	Cdc16	intron	ENSMUSG00000038416	ProperStrand	28	chrX	71517877	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	3	-17.8935
chr9	15124258	15124283	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	NonProperStrand	100	chr5	115939521	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	4	-19.3117
chr2	124985933	124985951	protein_coding	Slc12a1	intron	ENSMUSG00000027202	ProperStrand	4	chr14	76247753	76247787	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-9.7427
chr8	112379001	112379299	protein_coding	Ap1g1	exon	ENSMUSG00000031731	ProperStrand	22	chr4	126117870	126117887	protein_coding	Eif2c1	intron	ENSMUSG00000041530	ProperStrand	30	1	-16.7996
chr4	128676477	128679433	protein_coding	Ak2	exon	ENSMUSG00000028792	ProperStrand	43	chr7	116663656	116663756	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.0984
chr3	73439793	73439809	protein_coding	Bche	utr3	ENSMUSG00000027792	ProperStrand	1	chr4	131865855	131865968	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr8	87368617	87368673	protein_coding	Calr	exon	ENSMUSG00000003814	ProperStrand	232	chr7	117190018	117190056	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-1.1468
chr11	116535920	116535980	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr7	133520549	133520566	protein_coding	Spns1	exon	ENSMUSG00000030741	NonProperStrand	16	1	-8.5649
chr10	74774636	74774723	protein_coding	Specc1l	utr3	ENSMUSG00000033444	ProperStrand	36	chr1	162965540	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.2292
chr18	10726355	10726434	protein_coding	Mib1	exon	ENSMUSG00000024294	ProperStrand	27	chr6	108416164	108416216	protein_coding	Itpr1	intron	ENSMUSG00000030102	ProperStrand	94	2	-20.2616
chr19	61301464	61301481	protein_coding	Csf2ra	exon	ENSMUSG00000059326	ProperStrand	17	chr11	62418036	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-8.0799
chr16	38369597	38369614	protein_coding	Popdc2	exon	ENSMUSG00000022803	ProperStrand	19	chrX	139192201	139192217	protein_coding	Tmem164	intron	ENSMUSG00000047045	NonProperStrand	29	1	-17.2367
chr3	103819098	103819142	protein_coding	Magi3	utr3	ENSMUSG00000052539	ProperStrand	19	chr18	35716762	35716829	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-7.1642
chr8	13876100	13876190	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	chr4	116828388	116828452	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-2.4827
chr17	56528777	56528793	protein_coding	Kdm4b	intron	ENSMUSG00000024201	NonProperStrand	6	chr8	123157807	123157824	protein_coding	1190005I06Rik	intron	ENSMUSG00000043687	ProperStrand	3	1	-inf
chr4	138847036	138847117	protein_coding	Capzb	utr3	ENSMUSG00000028745	ProperStrand	44	chr4	57706987	57707003	protein_coding	Palm2	intron	ENSMUSG00000090053	NonProperStrand	187	1	-11.6587
chr19	24188625	24188658	protein_coding	Tjp2	exon	ENSMUSG00000024812	ProperStrand	63	chr8	83291472	83291517	protein_coding	Gab1	intron	ENSMUSG00000031714	ProperStrand	72	2	-19.9124
chr6	85164290	85164306	protein_coding	Sfxn5	utr3	ENSMUSG00000033720	ProperStrand	26	chr4	131865855	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.1929
chr4	137867628	137867805	protein_coding	Ddost	exon	ENSMUSG00000028757	ProperStrand	49	chr16	23111374	23111454	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.5489
chr1	172072496	172072549	protein_coding	Uap1	utr3	ENSMUSG00000026670	ProperStrand	18	chr16	23110941	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-12.3805
chr1	58228679	58228696	protein_coding	Aox3	exon	ENSMUSG00000064294	ProperStrand	39	chr16	23111776	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.6215
chr4	92978497	92978514	LTR	MTC	MaLR	chr4MTC92978461	ProperStrand	1	chr4	131908689	131908810	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-inf
chr4	137311559	137311659	protein_coding	Alpl	exon	ENSMUSG00000028766	ProperStrand	80	chr10	110918560	110918638	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-2.9293
chr6	113100959	113101045	protein_coding	Setd5	exon	ENSMUSG00000034269	ProperStrand	162	chr11	77994803	77994860	snoRNA	ENSMUSG00000064540_Snord42a	.	ENSMUSG00000064540	ProperStrand	142	1	-9.5921
chr17	57164214	57164257	protein_coding	Khsrp	exon	ENSMUSG00000007670	ProperStrand	353	chr11	68886927	68887035	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-1.1725
chr9	78215844	78215877	protein_coding	Dppa5a	exon	ENSMUSG00000060461	ProperStrand	79	chr16	23110538	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.0054
chr7	134807011	134807059	protein_coding	Bcl7c	utr3	ENSMUSG00000030814	ProperStrand	15	chr16	23110470	23110560	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.0488
chr13	100199701	100199769	protein_coding	Mtap1b	exon	ENSMUSG00000052727	ProperStrand	76	chr1	162968454	162968512	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-5.6150
chr13	78303923	78304003	protein_coding	Fam172a	utr3	ENSMUSG00000064138	ProperStrand	17	chr6	115757992	115758082	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-7.9927
chr4	135846171	135846187	protein_coding	Zfp46	exon	ENSMUSG00000051351	NonProperStrand	85	chr4	131908830	131908875	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.7895
chr11	101177660	101177678	protein_coding	Psme3	utr5	ENSMUSG00000078652	NonProperStrand	1	chr7	52381972	52382025	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-inf
chr11	11714497	11714514	protein_coding	Ddc	utr3	ENSMUSG00000020182	ProperStrand	19	chr13	14250095	14252537	protein_coding	Arid4b	exon	ENSMUSG00000039219	ProperStrand	28	1	-17.0467
chr15	98893198	98893278	SINE	B1_Mus2	Alu	chr15B1_Mus298893166	ProperStrand	1	chr14	118376148	118376238	protein_coding	Gpc6	utr3	ENSMUSG00000058571	ProperStrand	28	1	-inf
chr9	110544350	110544366	protein_coding	Nbeal2	exon	ENSMUSG00000056724	ProperStrand	161	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-5.2623
chr16	39025695	39025724	protein_coding	Igsf11	utr3	ENSMUSG00000022790	ProperStrand	3	chr10	82092662	82092706	protein_coding	Tdg	utr5	ENSMUSG00000034674	ProperStrand	42	1	-21.3449
chr6	67217090	67217136	protein_coding	Serbp1	exon	ENSMUSG00000036371	ProperStrand	261	chr8	3568023	3568039	protein_coding	C330021F23Rik	utr5	ENSMUSG00000065952	NonProperStrand	85	1	-9.6667
chr1	30887587	30887668	protein_coding	Phf3	exon	ENSMUSG00000048874	ProperStrand	102	chr12	17553037	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	2	-6.8301
chr11	97577415	97590809	protein_coding	Pip4k2b	utr3	ENSMUSG00000018547	ProperStrand	46	chr4	131865866	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	9	-22.3060
chr17	32278318	32278430	protein_coding	Notch3	exon	ENSMUSG00000038146	ProperStrand	181	chr17	24857817	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-0.7315
chr11	6523906	6523922	protein_coding	Tbrg4	exon	ENSMUSG00000000384	NonProperStrand	56	chr7	16524110	16524181	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	1	-9.8570
chr9	64981509	64981525	protein_coding	Igdcc4	exon	ENSMUSG00000032816	NonProperStrand	36	chr1	39605591	39605655	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	4	-inf
chr8	81862905	81862986	protein_coding	Smad1	utr3	ENSMUSG00000031681	ProperStrand	45	chr7	107647763	107647853	protein_coding	Ucp2	exon	ENSMUSG00000033685	ProperStrand	54	37	-20.1707
chr19	29678580	29678596	protein_coding	C030046E11Rik	exon	ENSMUSG00000038658	ProperStrand	104	chr11	77996576	77996608	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-5.0184
chr10	40908454	40940743	protein_coding	Fig4	exon	ENSMUSG00000038417	ProperStrand	18	chr19	8800377	8800457	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	4	-17.9110
chr7	26543963	26543979	protein_coding	Axl	exon	ENSMUSG00000002602	NonProperStrand	47	chr10	23505584	23505627	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-8.0384
chr11	62416575	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	chr5	108336363	108336503	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	11	-2.3078
chr7	150717298	150717348	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	chr4	132394419	132394462	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	1	-1.7449
chr8	87358228	87358301	protein_coding	Gadd45gip1	exon	ENSMUSG00000033751	ProperStrand	45	chr14	76247765	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	9	-19.1430
chr13	58311961	58311999	protein_coding	Ubqln1	intron	ENSMUSG00000005312	ProperStrand	49	chr12	106269445	106269558	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-4.5261
chr2	130101235	130101257	protein_coding	Nop56	intron	ENSMUSG00000027405	ProperStrand	125	chr16	23111707	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	15	-19.6334
chr9	21807969	21808163	protein_coding	Prkcsh	exon	ENSMUSG00000003402	ProperStrand	58	chr10	23505197	23505287	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-3.9021
chr2	3409980	3410028	protein_coding	Hspa14	intron	ENSMUSG00000051396	ProperStrand	23	chr12	88778631	88778722	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	9	-20.2469
chr12	53051986	53052068	protein_coding	Heatr5a	exon	ENSMUSG00000035181	ProperStrand	21	chr15	98356820	98356892	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	2	-15.6192
chr13	14403470	14403487	protein_coding	Hecw1	intron	ENSMUSG00000021301	ProperStrand	15	chr19	8798484	8798519	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-7.9821
chr15	81542528	81543277	protein_coding	Rangap1	exon	ENSMUSG00000022391	ProperStrand	69	chr4	131908809	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	7	-10.2662
chr3	88659566	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr11	97642952	97643090	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	12	-1.5085
chr4	48435014	48438875	protein_coding	Invs	exon	ENSMUSG00000028344	ProperStrand	2	chr16	23111695	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-8.9529
chr11	84722945	84722961	protein_coding	Myo19	exon	ENSMUSG00000020527	ProperStrand	82	chr14	32042378	32042394	protein_coding	Sema3g	utr3	ENSMUSG00000021904	NonProperStrand	47	1	-13.1807
chr2	90235294	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr12	111875795	111879362	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	3	-2.3101
chr12	32172010	32172034	protein_coding	Cbll1	utr3	ENSMUSG00000020659	ProperStrand	19	chr18	35716704	35716761	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.2504
chr6	29325334	29325384	protein_coding	Calu	utr3	ENSMUSG00000029767	ProperStrand	47	chr4	116826700	116826750	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-7.2676
chr7	134671404	134671504	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	chr5	108336375	108336495	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	10	-11.8824
chr12	17552939	17552983	protein_coding	Odc1	intron	ENSMUSG00000011179	ProperStrand	173	chr18	35714180	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-1.6483
chr5	138609322	138609354	protein_coding	Mcm7	exon	ENSMUSG00000029730	ProperStrand	258	chr1	185857228	185857244	protein_coding	1700056E22Rik	exon	ENSMUSG00000044854	ProperStrand	173	1	-8.2702
chr6	86336465	86336481	protein_coding	Pcyox1	utr3	ENSMUSG00000029998	NonProperStrand	13	chr7	116663652	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	6	-inf
chr2	25416138	25416187	protein_coding	Edf1	exon	ENSMUSG00000015092	ProperStrand	22	chr8	74432512	74432529	protein_coding	Zfp882	utr5	ENSMUSG00000089857	NonProperStrand	12	1	-19.2765
chr2	83644877	83644894	protein_coding	Itgav	utr3	ENSMUSG00000027087	NonProperStrand	33	chr7	117189933	117189954	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.4547
chr19	9952867	9958217	protein_coding	Incenp	exon	ENSMUSG00000024660	ProperStrand	111	chr1	88247767	88247857	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-3.9235
chrX	74796705	74796796	protein_coding	Tbl1x	intron	ENSMUSG00000025246	ProperStrand	56	chr7	52381719	52381736	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	3	-17.2884
mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr7	26472435	26472451	protein_coding	Tgfb1	utr5	ENSMUSG00000002603	NonProperStrand	154	1	-4.0869
chr8	97388094	97388194	protein_coding	Dok4	utr3	ENSMUSG00000040631	ProperStrand	3	chr1	162967530	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-9.6828
chr13	9833564	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chrX	20248863	20248933	protein_coding	Uba1	exon	ENSMUSG00000001924	ProperStrand	156	1	-3.1636
chr7	38354919	38354935	protein_coding	Zfp536	exon	ENSMUSG00000043456	NonProperStrand	236	chr7	52382237	52382313	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-5.5763
chr3	137993965	137993987	protein_coding	Adh6a	utr3	ENSMUSG00000053054	ProperStrand	1	chr5	74489543	74489665	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-inf
chr17	56127637	56127667	protein_coding	Fsd1	exon	ENSMUSG00000011589	ProperStrand	6	chr2	37502726	37502742	protein_coding	Strbp	utr5	ENSMUSG00000026915	ProperStrand	90	1	-17.1615
chr5	44149878	44149968	protein_coding	Fbxl5	exon	ENSMUSG00000039753	ProperStrand	18	chr16	23111377	23111457	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.2408
chr11	53512488	53515462	protein_coding	Rad50	exon	ENSMUSG00000020380	ProperStrand	61	chr6	143039193	143048261	protein_coding	5730419I09Rik	exon	ENSMUSG00000030279	ProperStrand	81	7	-19.2096
chr5	116174721	116174738	protein_coding	Ccdc64	exon	ENSMUSG00000041609	ProperStrand	51	chr4	131865855	131865917	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-5.5951
chr9	110291095	110291112	protein_coding	Ptpn23	exon	ENSMUSG00000036057	ProperStrand	34	chr16	23110911	23111005	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.8174
chr17	33688073	33688215	protein_coding	Adamts10	exon	ENSMUSG00000024299	ProperStrand	5	chr13	76156115	76156132	protein_coding	Rfesd	utr5	ENSMUSG00000043190	ProperStrand	30	1	-19.7492
chr1	18204299	18204315	pseudogene	Defb44-ps	.	ENSMUSG00000070977	ProperStrand	37	chr19	8963104	8963124	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.1181
chr4	151420685	151420714	protein_coding	Nol9	exon	ENSMUSG00000028948	ProperStrand	93	chr8	13876178	13876226	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-6.2761
chr14	96988122	96988179	snoRNA	ENSMUSG00000064581_SNORA30	.	ENSMUSG00000064581	ProperStrand	146	chr8	129468799	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	4	-9.7288
chr18	34765299	34766110	protein_coding	Brd8	exon	ENSMUSG00000003778	ProperStrand	27	chr7	134671414	134671504	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-9.4795
chr6	47746806	47746875	protein_coding	Pdia4	exon	ENSMUSG00000025823	ProperStrand	41	chr7	29136530	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-7.7642
chr7	134673957	134674047	protein_coding	Srcap	exon	ENSMUSG00000053877	ProperStrand	69	chr15	79908929	79909009	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-5.2003
chr11	119353268	119360854	protein_coding	A730011L01Rik	exon	ENSMUSG00000039850	ProperStrand	25	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-10.6951
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	87983868	87983958	snoRNA	ENSMUSG00000077274_SNORA26	.	ENSMUSG00000077274	ProperStrand	361	1	-1.3731
chr6	67221892	67222009	protein_coding	Serbp1	exon	ENSMUSG00000036371	ProperStrand	261	chr7	52381973	52382007	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-3.8702
chr13	54794781	54794798	protein_coding	Rnf44	intron	ENSMUSG00000034928	ProperStrand	90	chr5	121655027	121655096	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.0079
chr9	80154688	80154705	protein_coding	Myo6	intron	ENSMUSG00000033577	ProperStrand	29	chr7	52382237	52382261	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-9.7480
chr4	65899855	65899872	protein_coding	Astn2	intron	ENSMUSG00000028373	NonProperStrand	10	chr16	23111705	23111754	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.2069
chr11	106690665	106690765	protein_coding	Smurf2	intron	ENSMUSG00000018363	ProperStrand	79	chr19	8799035	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-5.2949
chr17	89408214	89408230	protein_coding	Fshr	intron	ENSMUSG00000032937	NonProperStrand	29	chr4	131908755	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.3468
chr8	86097795	86118261	protein_coding	Tecr	exon	ENSMUSG00000031708	ProperStrand	100	chr7	117189957	117189991	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.4315
chrX	71175411	71175790	protein_coding	Renbp	exon	ENSMUSG00000031387	ProperStrand	6	chr18	35716841	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	5	-20.2936
chr15	12251612	12251629	protein_coding	Golph3	exon	ENSMUSG00000022200	ProperStrand	35	chr11	6428065	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.1952
chr7	51747579	51747645	protein_coding	2310044H10Rik	exon	ENSMUSG00000008140	ProperStrand	14	chr15	51619564	51621577	protein_coding	Eif3h	exon	ENSMUSG00000022312	ProperStrand	45	4	-inf
chr7	109585189	109585235	protein_coding	Stim1	utr3	ENSMUSG00000030987	ProperStrand	24	chr1	39605591	39605632	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	2	-14.6026
chr18	20629562	20629581	protein_coding	Dsg4	exon	ENSMUSG00000001804	NonProperStrand	13	chr2	24915691	24915707	protein_coding	Nelf	exon	ENSMUSG00000006476	ProperStrand	40	1	-17.3199
chr6	57712505	57712521	protein_coding	Vopp1	exon	ENSMUSG00000037788	NonProperStrand	21	chr1	88995230	88995253	protein_coding	Alpi	exon	ENSMUSG00000079440	NonProperStrand	7	1	-21.4650
chr6	34254247	34254334	protein_coding	Akr1b3	utr3	ENSMUSG00000001642	ProperStrand	71	chr1	89673606	89673696	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	10	-inf
chr10	79317383	79317401	protein_coding	Ptbp1	utr5	ENSMUSG00000006498	ProperStrand	129	chr12	92811842	92811876	protein_coding	Gtf2a1	intron	ENSMUSG00000020962	ProperStrand	61	1	-11.7432
chr5	125528738	125528787	protein_coding	Ncor2	exon	ENSMUSG00000029478	ProperStrand	377	chr6	52165758	52165774	protein_coding	Hoxa7	exon	ENSMUSG00000038236	ProperStrand	28	1	-11.1716
chr13	73652143	73652169	protein_coding	Lpcat1	utr3	ENSMUSG00000021608	ProperStrand	42	chr19	9951195	9951259	protein_coding	Incenp	exon	ENSMUSG00000024660	ProperStrand	111	1	-12.7985
chr3	52799969	52802200	protein_coding	Cog6	exon	ENSMUSG00000027742	ProperStrand	5	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-8.6129
chr10	61136700	61136772	protein_coding	Ppa1	utr3	ENSMUSG00000020089	ProperStrand	30	chr11	62416973	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	2	-11.9303
chr8	75266971	75267061	protein_coding	Sin3b	intron	ENSMUSG00000031622	NonProperStrand	3	chr8	75267143	75267223	protein_coding	Sin3b	intron	ENSMUSG00000031622	ProperStrand	66	1	-20.4792
chr16	85795631	85795647	protein_coding	Adamts1	utr3	ENSMUSG00000022893	ProperStrand	102	chr17	35089181	35089236	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-4.4607
chr19	8798483	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	chr4	131865380	131865503	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	12	-0.8163
chr6	100178822	100179708	protein_coding	Rybp	utr3	ENSMUSG00000072872	ProperStrand	51	chr16	23110473	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	8	-inf
chr11	53463912	53464012	protein_coding	Rad50	utr3	ENSMUSG00000020380	ProperStrand	61	chr2	130102054	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-5.3243
chr18	7916130	7916152	protein_coding	Wac	exon	ENSMUSG00000024283	ProperStrand	38	chr11	6428107	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.0389
chr17	39979943	39980016	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr1	9932550	9932626	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	2	-3.6139
chr11	62416578	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	chr14	33005038	33005236	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	19	-3.4968
chr10	98726553	98726570	protein_coding	Dusp6	exon	ENSMUSG00000019960	ProperStrand	116	chr7	35816408	35816457	protein_coding	Pepd	exon	ENSMUSG00000063931	ProperStrand	12	1	-15.2743
chr12	101759078	101759095	Low_complexity	GC_rich	Low_complexity	chr12GC_rich101758901	ProperStrand	34	chr11	62418014	62418044	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-6.6800
chr4	88005250	88005797	protein_coding	BC057079	exon	ENSMUSG00000038368	ProperStrand	52	chr7	51503464	51503544	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	1	-8.9022
chr8	74008400	74008417	protein_coding	Ano8	exon	ENSMUSG00000034863	NonProperStrand	171	chr3	68889026	68889245	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	10	-19.2319
chr1	194810393	194810424	protein_coding	Syt14	intron	ENSMUSG00000016200	ProperStrand	10	chr7	29136523	29136544	protein_coding	Rps16	intron	ENSMUSG00000037563	ProperStrand	191	1	-14.6616
chr7	13615517	13615639	protein_coding	Trim28	exon	ENSMUSG00000005566	ProperStrand	296	chr11	6428067	6428170	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-0.7575
chr1	137723983	137724083	protein_coding	Lad1	exon	ENSMUSG00000041782	ProperStrand	4	chr13	51743627	51743703	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-12.5173
chr16	11144204	11144276	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr4	116862546	116862646	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	NonProperStrand	3	2	-inf
chr11	80965641	80965658	protein_coding	Accn1	exon	ENSMUSG00000020704	NonProperStrand	228	chr18	22687709	22687748	protein_coding	Asxl3	utr3	ENSMUSG00000045215	ProperStrand	9	1	-14.5324
chr17	45707722	45708064	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr5	142459852	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	1	-4.1237
chr7	108440949	108440968	protein_coding	Atg16l2	intron	ENSMUSG00000047767	ProperStrand	121	chr3	123210872	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	4	-4.7659
chr11	61359749	61359787	protein_coding	Epn2	exon	ENSMUSG00000001036	ProperStrand	16	chr5	121655070	121655099	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-6.3246
chr8	77575513	77575832	protein_coding	Tom1	exon	ENSMUSG00000042870	ProperStrand	30	chr18	35714196	35714291	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.7548
chr15	85699153	85699478	protein_coding	Gtse1	exon	ENSMUSG00000022385	ProperStrand	74	chr17	35087895	35087946	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	5	-19.0784
chr8	24367267	24367497	protein_coding	Golga7	utr5	ENSMUSG00000015341	ProperStrand	36	chr7	116663697	116663759	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-5.8578
chr15	34447668	34447758	protein_coding	Pop1	exon	ENSMUSG00000022325	ProperStrand	19	chr4	131908721	131908801	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.0948
chr12	87861483	87861499	protein_coding	Esrrb	utr3	ENSMUSG00000021255	ProperStrand	254	chr5	74489595	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-1.3543
chr5	121071729	121071829	protein_coding	Ddx54	exon	ENSMUSG00000029599	ProperStrand	104	chr19	8963027	8963079	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.4170
chr13	103895241	103895257	protein_coding	Mast4	intron	ENSMUSG00000034751	ProperStrand	150	chr8	73419733	73419785	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-1.6032
chr7	97592594	97592669	protein_coding	Crebzf	utr3	ENSMUSG00000051451	ProperStrand	24	chr19	8800358	8800448	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-5.2834
chr2	118572093	118572110	antisense	5430417L22Rik	.	ENSMUSG00000074918	ProperStrand	5	chr17	24857750	24857840	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-7.1522
chr9	107503209	107503226	protein_coding	Sema3b	exon	ENSMUSG00000057969	NonProperStrand	1	chr19	8963027	8963083	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-inf
chr8	98269962	98270062	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	chr9	64143805	64143873	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	7	-8.8350
chr11	50016076	50016324	protein_coding	Sqstm1	exon	ENSMUSG00000015837	ProperStrand	36	chr2	123936884	123936902	protein_coding	Sema6d	intron	ENSMUSG00000027200	NonProperStrand	18	1	-16.7641
chr19	36927040	36927378	protein_coding	Tnks2	exon	ENSMUSG00000024811	ProperStrand	133	chr3	123210891	123210971	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-0.9235
chr5	122622839	122622929	protein_coding	Ppp1cc	exon	ENSMUSG00000004455	ProperStrand	46	chr11	64820020	64820100	protein_coding	Arhgap44	intron	ENSMUSG00000033389	ProperStrand	28	1	-15.3778
chr11	68404923	68404943	protein_coding	Ccdc42	intron	ENSMUSG00000045915	ProperStrand	1	chr4	140776257	140776341	protein_coding	6330545A04Rik	intron	ENSMUSG00000073733	ProperStrand	3	1	-inf
chr12	110881093	110881115	lincRNA	Rian	intron	ENSMUSG00000091793	ProperStrand	612	chr4	141151204	141151285	protein_coding	Fblim1	exon	ENSMUSG00000006219	ProperStrand	26	2	-16.2993
chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	chr9	21205591	21205723	protein_coding	Ilf3	utr3	ENSMUSG00000032178	ProperStrand	164	1	-8.4633
chr2	167836657	167836685	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	chr2	24657591	24658587	protein_coding	Ehmt1	exon	ENSMUSG00000036893	ProperStrand	45	2	-19.3749
chr9	108434845	108436352	protein_coding	Qrich1	intron	ENSMUSG00000006673	ProperStrand	30	chr11	69483136	69483250	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-6.2839
chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	chr7	34918238	34918254	protein_coding	Wtip	utr5	ENSMUSG00000036459	NonProperStrand	9	1	-13.6460
chr19	39917317	39917333	protein_coding	Cyp2c69	utr3	ENSMUSG00000092008	NonProperStrand	83	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.2907
chr10	7521730	7524806	protein_coding	Ppil4	exon	ENSMUSG00000015757	ProperStrand	18	chr18	35716773	35716853	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-7.3288
chr6	91660561	91660617	protein_coding	Slc6a6	intron	ENSMUSG00000030096	ProperStrand	206	chr8	113362486	113362512	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	1	-6.8090
chr13	68759738	68764669	protein_coding	Adcy2	exon	ENSMUSG00000021536	ProperStrand	237	chr7	16524179	16524219	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	1	-6.9800
chr12	32497986	32498066	protein_coding	Cog5	intron	ENSMUSG00000035933	ProperStrand	16	chr8	109250441	109250531	protein_coding	Tmco7	intron	ENSMUSG00000041949	NonProperStrand	15	1	-19.5060
chr1	82679326	82679342	protein_coding	Col4a3	exon	ENSMUSG00000079465	ProperStrand	99	chr17	24857799	24857853	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.5074
chr4	13793076	13793093	protein_coding	Runx1t1	exon	ENSMUSG00000006586	ProperStrand	7	chr1	162965980	162966022	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-7.8886
chr14	70538409	70538509	protein_coding	2610301G19Rik	utr3	ENSMUSG00000033712	ProperStrand	49	chr2	145076805	145209255	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-8.1286
chr4	115984299	115984362	protein_coding	Mast2	exon	ENSMUSG00000003810	ProperStrand	37	chr16	20357452	20357470	protein_coding	Abcc5	exon	ENSMUSG00000022822	ProperStrand	30	1	-15.7162
chr1	15806415	15806501	protein_coding	Terf1	intron	ENSMUSG00000025925	ProperStrand	19	chr16	23110980	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7016
chr9	78023108	78023183	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr2	32818887	32818941	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	7	-2.9830
chr12	110888855	110888905	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr5	65217641	65217731	protein_coding	Klf3	intron	ENSMUSG00000029178	ProperStrand	56	1	-8.8048
chr2	29745367	29747721	protein_coding	Odf2	exon	ENSMUSG00000026790	ProperStrand	58	chr8	113376279	113376313	protein_coding	Cog4	exon	ENSMUSG00000031753	ProperStrand	53	2	-21.4707
chr11	114362172	114362191	SINE	B3	B2	chr11B3114362070	ProperStrand	1	chr2	158182202	158182277	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-inf
chr15	76523742	76524027	protein_coding	Ppp1r16a	exon	ENSMUSG00000033819	ProperStrand	122	chr1	162967547	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	6	-13.2561
chr17	24895517	24895534	protein_coding	Hs3st6	utr3	ENSMUSG00000039628	ProperStrand	6	chrX	97318507	97318525	protein_coding	Eda	intron	ENSMUSG00000059327	NonProperStrand	5	1	-19.0115
chr11	101430812	101430834	protein_coding	Nbr1	exon	ENSMUSG00000017119	ProperStrand	91	chr7	116664848	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.8616
chr13	104902156	104902176	protein_coding	Sgtb	intron	ENSMUSG00000042743	ProperStrand	60	chr9	15118244	15118289	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.4666
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr9	95382671	95384643	protein_coding	2610101N10Rik	exon	ENSMUSG00000032407	ProperStrand	56	2	-10.5243
chr12	110925042	110925066	snoRNA	ENSMUSG00000064726_SNORD113	.	ENSMUSG00000064726	ProperStrand	42	chrX	71517821	71517922	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-7.2552
chr10	18245132	18245148	protein_coding	Nhsl1	exon	ENSMUSG00000039835	ProperStrand	18	chr15	103071548	103071913	protein_coding	Hnrnpa1	exon	ENSMUSG00000046434	ProperStrand	68	4	-18.9744
chr9	53416957	53416992	protein_coding	Acat1	intron	ENSMUSG00000032047	ProperStrand	13	chr2	125548900	125548917	protein_coding	Shc4	exon	ENSMUSG00000035109	ProperStrand	19	1	-18.8581
chr5	37700302	37700318	protein_coding	Evc	exon	ENSMUSG00000029122	ProperStrand	14	chr3	78882245	78882262	protein_coding	Rapgef2	intron	ENSMUSG00000062232	NonProperStrand	6	1	-20.8732
chr4	76614453	76614470	protein_coding	Ptprd	intron	ENSMUSG00000028399	ProperStrand	198	chr16	56035865	56035919	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	2	-10.6048
chr1	115800719	115800735	lincRNA	9330185C12Rik	intron	ENSMUSG00000086520	ProperStrand	45	chr8	129468749	129468849	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-4.9675
chr7	108971290	108971306	protein_coding	Inppl1	utr3	ENSMUSG00000032737	ProperStrand	272	chr5	108334193	108334273	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-2.0892
chr5	149715364	149715380	protein_coding	Katnal1	intron	ENSMUSG00000041298	ProperStrand	14	chr16	23110827	23110875	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.2008
chr15	34370648	34370692	protein_coding-noncoding	Rpl30	utr3	ENSMUSG00000058600	ProperStrand	30	chr17	47604805	47604821	protein_coding	AI661453	exon	ENSMUSG00000034382	NonProperStrand	38	1	-15.6539
chr6	40421993	40422077	protein_coding	Ssbp1	utr5	ENSMUSG00000029911	ProperStrand	5	chr5	130300443	130300533	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-7.4021
chr11	110936980	110936996	protein_coding	Kcnj2	utr3	ENSMUSG00000041695	NonProperStrand	3	chr16	23110914	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-inf
chr2	32087654	32087697	protein_coding	Prrc2b	utr3	ENSMUSG00000039262	ProperStrand	344	chr6	115757992	115758048	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	2	-4.0139
chr6	113566214	113566252	protein_coding	6720456B07Rik	utr3	ENSMUSG00000033940	ProperStrand	5	chr6	45494576	45494594	protein_coding	Cntnap2	intron	ENSMUSG00000039419	NonProperStrand	283	1	-15.3462
chrX	147428837	147428890	protein_coding	Gnl3l	exon	ENSMUSG00000025266	ProperStrand	52	chr5	123622050	123622066	protein_coding	Hpd	exon	ENSMUSG00000029445	ProperStrand	254	1	-10.7085
chr17	25996060	25996076	protein_coding	Wdr90	exon	ENSMUSG00000073434	ProperStrand	91	chr19	8963027	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.6128
chrX	150110494	150110512	LTR	MTC	MaLR	chrXMTC150110459	ProperStrand	1	chr7	25897955	25898026	protein_coding	Pou2f2	intron	ENSMUSG00000008496	ProperStrand	1	1	-inf
chr4	118804800	118804827	protein_coding	Slc2a1	exon	ENSMUSG00000028645	ProperStrand	361	chr7	54442495	54442595	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-6.1629
chr6	121423179	121423195	protein_coding	Iqsec3	utr5	ENSMUSG00000040797	NonProperStrand	139	chr11	62416598	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-3.5730
chr12	60575476	60575494	LINE	L1_Mus4	L1	chr12L1_Mus460575423	ProperStrand	33	chr5	108334195	108334241	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-5.9898
chr5	123338702	123338741	protein_coding	Kdm2b	exon	ENSMUSG00000029475	ProperStrand	30	chr16	23110968	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0481
chr8	124960974	124960990	protein_coding	Mvd	exon	ENSMUSG00000006517	ProperStrand	13	chr11	120503006	120503079	protein_coding	Pycr1	exon	ENSMUSG00000025140	ProperStrand	17	4	-21.7628
chr1	59539683	59539700	protein_coding	Fzd7	utr5	ENSMUSG00000041075	ProperStrand	373	chr18	33954826	33954913	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-0.6946
chr2	35210221	35210237	protein_coding	4930568D16Rik	exon	ENSMUSG00000026882	NonProperStrand	2	chr16	23110909	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-inf
chr15	99992529	99993168	protein_coding	Dip2b	exon	ENSMUSG00000023026	ProperStrand	48	chr4	131908689	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.5413
chr16	55991037	55991137	protein_coding	Rpl24	exon	ENSMUSG00000022601	ProperStrand	149	chr3	108525026	108525042	protein_coding	Gpsm2	utr5	ENSMUSG00000027883	ProperStrand	20	10	-19.5672
chr16	91417366	91417384	protein_coding	RP23-190G10.4	intron	ENSMUSG00000093701	ProperStrand	2	chr11	6428060	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-10.4671
chr7	87701265	87701355	SINE	B3	B2	chr7B387701222	ProperStrand	1	chr7	87701071	87701161	SINE	ID_B1	B4	chr7ID_B187701036	NonProperStrand	1	1	-inf
chr15	26517463	26517519	protein_coding	Fbxl7	intron	ENSMUSG00000043556	ProperStrand	8	chr16	23110829	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-8.6552
chr12	36750543	36750643	protein_coding	Tspan13	exon	ENSMUSG00000020577	ProperStrand	4	chr8	13416897	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-12.1048
chr14	31923646	31923725	protein_coding	Pbrm1	exon	ENSMUSG00000042323	ProperStrand	87	chr7	52382013	52382037	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-5.9786
chr13	23673794	23673818	protein_coding	Hist1h4d	utr3	ENSMUSG00000061482	ProperStrand	57	chr11	68886928	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	7	-19.8145
chr12	111891514	111891604	protein_coding	Dync1h1	intron	ENSMUSG00000018707	ProperStrand	648	chr6	117874247	117874299	protein_coding	Hnrnpf	exon	ENSMUSG00000042079	ProperStrand	147	6	-inf
chr11	32121931	32121983	protein_coding	Rhbdf1	intron	ENSMUSG00000020282	ProperStrand	23	chr5	87680856	87680872	protein_coding	Ugt2b37	exon	ENSMUSG00000057425	NonProperStrand	30	1	-16.6738
chr17	34054353	34054393	protein_coding	Zbtb22	exon	ENSMUSG00000051390	ProperStrand	7	chr16	23111690	23111780	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-9.9082
chr2	160729453	160729471	protein_coding	Lpin3	exon	ENSMUSG00000027412	NonProperStrand	3	chr3	123210854	123210933	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-8.0648
chr8	73419656	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	chr18	33954814	33954951	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	60	-3.1543
chr17	14011003	14011037	protein_coding	Mllt4	intron	ENSMUSG00000068036	ProperStrand	156	chr10	110918548	110918638	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-1.8116
chr15	101039540	101039587	protein_coding	Acvr1b	exon	ENSMUSG00000000532	ProperStrand	259	chr19	8798743	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-2.1528
chr13	104840893	104842635	protein_coding	Nln	exon	ENSMUSG00000021710	ProperStrand	47	chr5	147646733	147646794	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	1	-8.4477
chr4	133261476	133261492	protein_coding	Arid1a	intron	ENSMUSG00000007880	NonProperStrand	7	chr16	23111726	23111816	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.9463
chr17	88442322	88442409	protein_coding	Fbxo11	intron	ENSMUSG00000005371	ProperStrand	15	chr9	15118322	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-6.1555
chr11	51419856	51419920	protein_coding	Hnrnpab	exon	ENSMUSG00000020358	ProperStrand	124	chr1	24621214	24621244	protein_coding	Gm10925	utr3	ENSMUSG00000090378	ProperStrand	320	1	-8.5053
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr10	110918552	110918674	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-2.1716
chr4	117313452	117317929	protein_coding	Eri3	intron	ENSMUSG00000033423	ProperStrand	246	chr10	23505152	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-1.2761
chr12	88289017	88289034	protein_coding	2310044G17Rik	intron	ENSMUSG00000034157	ProperStrand	48	chr9	120039533	120039622	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-6.3198
chr10	90581058	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	chr3	88497889	88497980	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	2	-0.7723
chr5	21765136	21765154	protein_coding	Reln	intron	ENSMUSG00000042453	ProperStrand	11	chr10	23505152	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-7.0732
chr16	34986602	34986619	protein_coding	Mylk	exon	ENSMUSG00000022836	NonProperStrand	56	chr9	78326930	78327105	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-6.4707
chr17	36100086	36100120	protein_coding	Abcf1	exon	ENSMUSG00000038762	ProperStrand	206	chr2	130102057	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	4	-10.4062
chr5	23919559	23919576	protein_coding	Accn3	exon	ENSMUSG00000038276	ProperStrand	1	chr4	131865855	131865901	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr2	168460291	168460407	protein_coding	Atp9a	exon	ENSMUSG00000027546	ProperStrand	16	chr14	51709157	51709200	tRNA	tRNA191-TyrGTA	.	719555	ProperStrand	21	1	-18.0482
chr7	52263275	52263385	protein_coding	Scaf1	exon	ENSMUSG00000038406	ProperStrand	81	chr7	29136622	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	4	-7.2773
chr2	89368462	89368479	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	chr19	8799016	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-3.0461
chr12	85795348	85795388	protein_coding	Lin52	intron	ENSMUSG00000085793	ProperStrand	5	chr10	90581105	90581195	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-9.9015
chr8	86204988	86205086	protein_coding	Pkn1	exon	ENSMUSG00000057672	NonProperStrand	8	chr4	131908753	131908853	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.7736
chr11	87998206	88000565	protein_coding	Cuedc1	exon	ENSMUSG00000018378	NonProperStrand	20	chr17	25967831	25967870	protein_coding	Jmjd8	utr3	ENSMUSG00000025736	ProperStrand	2	1	-inf
chr9	30968899	30969382	protein_coding	Aplp2	exon	ENSMUSG00000031996	ProperStrand	172	chr9	120039588	120039678	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	8	-15.1333
chr10	20080835	20080858	protein_coding	Fam54a	utr3	ENSMUSG00000019992	ProperStrand	232	chr2	132088997	132089035	protein_coding	Cds2	utr5	ENSMUSG00000058793	ProperStrand	47	1	-11.0939
chr4	116826736	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	chr2	130101257	130101310	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	2	-1.7641
chr6	125410644	125410744	protein_coding	Cd9	utr3	ENSMUSG00000030342	ProperStrand	81	chr18	35716831	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	7	-13.5641
chr11	84339166	84339183	antisense	1500016L03Rik	.	ENSMUSG00000087211	ProperStrand	4	chr10	127525379	127525467	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	1	-14.3430
chr3	135280393	135280409	protein_coding	Nfkb1	intron	ENSMUSG00000028163	NonProperStrand	16	chr2	26494791	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.6366
chr19	29205228	29208911	protein_coding	Rcl1	exon	ENSMUSG00000024785	ProperStrand	14	chr1	75398882	75398962	protein_coding	Speg	exon	ENSMUSG00000026207	ProperStrand	42	1	-17.0360
chr9	55057284	55061717	protein_coding	Fbxo22	exon	ENSMUSG00000032309	ProperStrand	79	chr11	106362338	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-5.3047
chr7	54107267	54107335	protein_coding	Ldha	exon	ENSMUSG00000063229	ProperStrand	280	chr9	64143847	64143876	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-4.7499
chr4	43505656	43505723	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr15	79736782	79736825	protein_coding	Apobec3	exon	ENSMUSG00000009585	ProperStrand	14	1	-5.8657
chr2	90235303	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	94528679	94528698	LTR	RLTR20B3	ERVK	chr8RLTR20B394528403	ProperStrand	12	1	-7.6663
chr4	116875149	116875249	snRNA	ENSMUSG00000070228_U5	.	ENSMUSG00000070228	ProperStrand	131	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-3.9712
chr18	61715365	61715383	protein_coding	Csnk1a1	utr5	ENSMUSG00000024576	NonProperStrand	35	chr2	181316563	181316579	protein_coding	Uckl1	exon	ENSMUSG00000089917	ProperStrand	142	1	-12.6735
chr2	119742934	119772729	protein_coding	Mga	exon	ENSMUSG00000033943	ProperStrand	180	chr4	131865855	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-0.9511
chr7	71082868	71082931	protein_coding	Klf13	exon	ENSMUSG00000052040	ProperStrand	28	chr16	23111437	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.4504
chr19	45846174	45846200	protein_coding	Mgea5	exon	ENSMUSG00000025220	ProperStrand	53	chr5	130300436	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.7243
chr6	52708340	52715095	protein_coding	Tax1bp1	exon	ENSMUSG00000004535	ProperStrand	20	chr7	116664823	116664903	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	8	-inf
chr2	90235291	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	81873724	81873740	protein_coding	AW146020	exon	ENSMUSG00000035125	ProperStrand	34	1	-5.5655
chr7	106628104	106628146	snoRNA	ENSMUSG00000064966_Snord15b	.	ENSMUSG00000064966	ProperStrand	74	chr1	89673528	89673628	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-2.8873
chr11	57981232	57981322	protein_coding	Gemin5	exon	ENSMUSG00000037275	ProperStrand	33	chr7	148634701	148634788	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-8.4714
chr4	116875158	116875248	snRNA	ENSMUSG00000070228_U5	.	ENSMUSG00000070228	ProperStrand	131	chr7	148634717	148634797	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-2.5747
chr1	135553072	135553128	protein_coding	Zc3h11a	intron	ENSMUSG00000026464	ProperStrand	102	chr11	99885311	99885327	protein_coding	Krt33b	exon	ENSMUSG00000057723	NonProperStrand	352	2	-13.8223
chr17	35148586	35148756	protein_coding	Vars	exon	ENSMUSG00000007029	ProperStrand	121	chr3	123210854	123210908	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.0404
chr5	125498606	125498693	protein_coding	Ncor2	exon	ENSMUSG00000029478	ProperStrand	377	chr10	110918634	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	5	-4.7274
chr10	80642379	80642445	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr5	125343751	125343768	protein_coding	Zfp664	utr5	ENSMUSG00000079215	ProperStrand	47	2	-10.6449
chr17	35380079	35380128	protein_coding	Ddx39b	utr5	ENSMUSG00000019432	ProperStrand	119	chr9	21637355	21637371	protein_coding	Dock6	exon	ENSMUSG00000032198	ProperStrand	155	1	-10.0340
chr7	116663634	116663724	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	chr4	116828388	116828453	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	12	-5.3799
chr2	167468882	167468982	protein_coding	Tmem189	utr3	ENSMUSG00000090213	ProperStrand	6	chr16	23111384	23111446	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-5.4240
chr17	79344342	79344416	protein_coding	2410091C18Rik	exon	ENSMUSG00000024082	ProperStrand	3	chr7	52378401	52378417	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	2	-inf
chrX	7752870	7752886	protein_coding	Tbc1d25	exon	ENSMUSG00000039201	ProperStrand	126	chr17	24857763	24857786	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.1700
chr2	78709621	78709638	protein_coding	Ube2e3	intron	ENSMUSG00000027011	NonProperStrand	4	chr9	120038467	120038551	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-8.5118
chr13	114113333	114113350	protein_coding	BC067074	exon	ENSMUSG00000021763	NonProperStrand	62	chr9	15118245	15118291	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.4065
chr3	89009743	89009759	protein_coding	Gba	exon	ENSMUSG00000028048	NonProperStrand	88	chr11	4399048	4404066	protein_coding	Mtmr3	exon	ENSMUSG00000034354	ProperStrand	25	1	-14.3084
chr5	123526454	123526484	protein_coding	Tmem120b	exon	ENSMUSG00000054434	ProperStrand	3	chr11	101304830	101304846	protein_coding	Rpl27	exon	ENSMUSG00000063316	NonProperStrand	7	1	-inf
chr4	137106375	137106764	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	chr8	36529522	36529538	protein_coding	Eri1	utr3	ENSMUSG00000031527	NonProperStrand	97	1	-7.1475
chr5	147646760	147646840	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	chr13	49779712	49779802	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-2.0212
chr9	113583569	113587462	protein_coding	Pdcd6ip	exon	ENSMUSG00000032504	ProperStrand	53	chr4	131908705	131908785	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.3969
mmu-miR-6240	3	23	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr4	56910513	56910618	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	7	-4.7329
chr1	93182012	93182028	protein_coding	Ube2f	utr3	ENSMUSG00000034343	NonProperStrand	22	chr16	23110875	23110940	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.4786
chr7	5062343	5062361	protein_coding	Rfpl4	exon	ENSMUSG00000035191	NonProperStrand	27	chr1	88247755	88247799	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	2	-10.8060
chr11	60020368	60020458	protein_coding	Srebf1	exon	ENSMUSG00000020538	ProperStrand	24	chr18	35714167	35714247	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-5.1913
chr4	94503899	94503999	protein_coding	Tek	exon	ENSMUSG00000006386	ProperStrand	10	chr1	162966194	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-11.2304
chr7	30231512	30231592	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	chr8	93545708	93545798	protein_coding	Chd9	intron	ENSMUSG00000056608	ProperStrand	35	1	-9.9322
chr9	68496931	68496948	LINE	Lx8	L1	chr9Lx868496758	ProperStrand	6	chr9	57369130	57369163	protein_coding	Cox5a	utr5	ENSMUSG00000000088	ProperStrand	26	1	-18.7113
chr1	37474345	37474400	protein_coding	6330578E17Rik	utr3	ENSMUSG00000026112	ProperStrand	14	chr9	78328193	78328322	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-9.2710
chr10	6314287	6356587	protein_coding	Mthfd1l	exon	ENSMUSG00000040675	ProperStrand	50	chr10	23505150	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	8	-15.2299
chr6	39370246	39370289	protein_coding	Mkrn1	utr5	ENSMUSG00000029922	ProperStrand	177	chr4	122968584	122968674	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-4.1870
chr2	119199141	119199160	protein_coding	Ino80	utr3	ENSMUSG00000034154	ProperStrand	54	chr2	28678154	28678176	protein_coding	Gtf3c4	utr3	ENSMUSG00000035666	ProperStrand	14	1	-16.5633
chr2	150420132	150426016	protein_coding	2310001A20Rik	exon	ENSMUSG00000033096	ProperStrand	8	chr10	23505150	23505213	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-19.1176
chr11	120673212	120682023	protein_coding	Fasn	exon	ENSMUSG00000025153	ProperStrand	298	chr11	97642952	97643011	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	13	-15.3946
chr4	131825994	131826084	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	chr7	150717302	150717382	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-1.8067
chr7	121191417	121191455	protein_coding	Rras2	utr3	ENSMUSG00000055723	ProperStrand	26	chr9	120039581	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	6	-20.4759
chr3	85944541	85944604	snoRNA	ENSMUSG00000064390_Rnu73b	.	ENSMUSG00000064390	ProperStrand	164	chr10	80641693	80641759	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	4	-16.9298
chr17	35292925	35295972	protein_coding	Prrc2a	exon	ENSMUSG00000024393	ProperStrand	315	chr4	131908236	131908719	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	12	-6.4153
chrX	84483699	84483731	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr12	42221434	42221451	protein_coding	Immp2l	intron	ENSMUSG00000056899	ProperStrand	21	1	-10.3705
chr3	66100724	66100740	protein_coding	Veph1	utr5	ENSMUSG00000027831	NonProperStrand	92	chr1	90598740	90598758	protein_coding	Arl4c	utr5	ENSMUSG00000049866	ProperStrand	25	1	-14.2306
chr12	113977195	113977286	protein_coding	AW555464	exon	ENSMUSG00000072825	ProperStrand	96	chr9	64024945	64024998	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	1	-8.2014
chr6	99193379	99193451	protein_coding	Foxp1	intron	ENSMUSG00000030067	ProperStrand	16	chr12	17552950	17553040	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-7.7239
mmu-miR-6516-3p	3	22	miRNA	mmu-miR-6516-3p	.	mmu-miR-6516-3p	ProperStrand	4	chr12	17552962	17553010	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	2	-17.2900
chr13	28653437	28700391	lincRNA	2610307P16Rik	exon	ENSMUSG00000085936	ProperStrand	154	chr4	116826700	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-4.9365
chr2	26766798	26766839	snoRNA	ENSMUSG00000065258_SNORD24	.	ENSMUSG00000065258	ProperStrand	130	chr12	106269286	106269376	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	5	-12.3196
chr11	86894414	86894489	protein_coding	1200011M11Rik	exon	ENSMUSG00000020495	ProperStrand	8	chr17	24857759	24857849	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-10.1634
chr2	135820133	135824416	protein_coding	Plcb4	exon	ENSMUSG00000039943	NonProperStrand	57	chr14	33005039	33005092	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-4.0903
chr10	122217001	122217018	protein_coding	Ppm1h	intron	ENSMUSG00000034613	ProperStrand	51	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-6.0790
chr12	86607734	86609529	protein_coding	Mlh3	exon	ENSMUSG00000021245	ProperStrand	28	chr4	131908254	131908391	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-9.5863
chr10	96067564	96067581	LTR	RMER19B	ERVK	chr10RMER19B96067159	ProperStrand	12	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-11.8715
chr11	116535922	116535981	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chrX	71589885	71589904	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	1	-2.9310
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr3	89750435	89750451	protein_coding	Atp8b2	exon	ENSMUSG00000060671	ProperStrand	140	1	-8.7309
chr9	56943168	56943214	protein_coding	Sin3a	exon	ENSMUSG00000042557	ProperStrand	108	chr11	48616643	48616706	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	1	-8.1704
chr16	36071984	36072000	protein_coding	Ccdc58	utr5	ENSMUSG00000075229	NonProperStrand	55	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.9045
chr14	64113230	64114611	protein_coding	Tdh	exon	ENSMUSG00000021953	ProperStrand	67	chr4	131908236	131908279	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.2634
chr11	22735551	22735623	protein_coding	Commd1	utr3	ENSMUSG00000051355	ProperStrand	36	chr16	23110986	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.8249
chr17	35299507	35299597	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	chr2	144091720	144091800	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	ProperStrand	549	1	-1.0331
chr18	64555149	64555165	protein_coding	Onecut2	utr3	ENSMUSG00000045991	ProperStrand	8	chrX	84483703	84483750	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-12.3815
chr7	132202770	132202860	LINE	L2a	L2	chr7L2a132202791	ProperStrand	1	chr7	132203077	132203157	LTR	MLT2B2	ERVL	chr7MLT2B2132202982	NonProperStrand	1	1	-inf
chr10	117227045	117227061	protein_coding	Nup107	exon	ENSMUSG00000052798	NonProperStrand	66	chr19	8798484	8798534	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-5.0266
chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	chr11	72264738	72264799	protein_coding	Mybbp1a	exon	ENSMUSG00000040463	ProperStrand	279	1	-7.2096
chr10	127523129	127523219	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr5	111121065	111121145	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-2.1215
chr4	136101981	136101997	protein_coding	Luzp1	utr3	ENSMUSG00000001089	NonProperStrand	47	chr19	8963153	8963181	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.6924
chr15	81354775	81354791	SINE	B3A	B2	chr15B3A81354761	ProperStrand	16	chrX	131228586	131228640	protein_coding	Armcx4	exon	ENSMUSG00000049804	ProperStrand	15	1	-19.5060
chr11	29125910	29129947	protein_coding	Ccdc104	exon	ENSMUSG00000020462	ProperStrand	20	chr14	33005154	33005234	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-6.1342
chr7	109149271	109149287	protein_coding	Numa1	exon	ENSMUSG00000066306	NonProperStrand	171	chr6	71832574	71832687	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	2	-6.1192
chr9	42547171	42547189	protein_coding	Grik4	intron	ENSMUSG00000032017	NonProperStrand	14	chr4	131908356	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-6.7008
chr8	109577926	109577942	protein_coding	Cog8	exon	ENSMUSG00000031916	NonProperStrand	6	chr7	117189863	117189912	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-10.9406
chr19	44649472	44649506	protein_coding	Hif1an	utr3	ENSMUSG00000036450	ProperStrand	16	chr9	120037933	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	7	-19.5156
chr9	40117627	40119348	protein_coding	Gramd1b	exon	ENSMUSG00000040111	ProperStrand	40	chr3	95980331	95980360	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-7.6666
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr7	52632047	52632119	protein_coding	Snrnp70	exon	ENSMUSG00000063511	ProperStrand	61	1	-6.9947
chr11	53080529	53080554	protein_coding	Hspa4	exon	ENSMUSG00000020361	ProperStrand	69	chr4	56910496	56910595	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	3	-13.4730
chr5	115939528	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr1	63225578	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	9	-18.0974
chr1	71694695	71695842	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr11	77995191	77995228	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	3	-3.8818
chr19	46328545	46328571	protein_coding	Gbf1	exon	ENSMUSG00000025224	ProperStrand	50	chr10	23505154	23505202	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-2.8089
chr14	50141793	50141812	protein_coding	Slc35f4	intron	ENSMUSG00000021852	NonProperStrand	4	chr5	74489543	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-9.3217
chr9	15120986	15121069	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	chr15	79116773	79116805	protein_coding	Pla2g6	utr3	ENSMUSG00000042632	ProperStrand	32	3	-19.6926
chr17	33380658	33380705	protein_coding	Zfp955a	exon	ENSMUSG00000008686	ProperStrand	4	chr17	26360448	26360489	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	4	-inf
chr8	128016309	128016399	protein_coding	Sipa1l2	exon	ENSMUSG00000001995	ProperStrand	37	chr18	33954864	33954944	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-4.4152
chr17	47985840	47985871	rRNA	n-R5s28	.	ENSMUSG00000064748	ProperStrand	2	chr10	23505209	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-8.0476
chr7	70081474	70081492	LINE	Lx8	L1	chr7Lx870080889	ProperStrand	1	chr2	75500905	75500928	protein_coding	Hnrnpa3	exon	ENSMUSG00000059005	ProperStrand	289	1	-inf
chr7	146082983	146083043	protein_coding	Bnip3	utr3	ENSMUSG00000078566	ProperStrand	20	chr4	131908703	131908793	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-10.6615
chr16	13814177	13814267	protein_coding	Rrn3	utr3	ENSMUSG00000022682	ProperStrand	58	chr11	69483195	69483275	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.5077
chr5	125021820	125023111	protein_coding	Eif2b1	exon	ENSMUSG00000029388	ProperStrand	51	chr16	23111485	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.4898
chr6	118284037	118284053	SINE	B4	B4	chr6B4118284016	ProperStrand	2	chr15	76735316	76735384	protein_coding	Rpl8	exon	ENSMUSG00000003970	ProperStrand	191	1	-18.3692
chr19	4612495	4612529	protein_coding	Lrfn4	exon	ENSMUSG00000045045	ProperStrand	19	chr18	35716832	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-7.1642
chr1	162968202	162968292	non_coding	Gas5	.	ENSMUSG00000053332	ProperStrand	144	chr3	123210897	123210977	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-0.8300
chr17	31240997	31241026	protein_coding	Abcg1	exon	ENSMUSG00000024030	ProperStrand	36	chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	1	-10.3038
chr9	39358287	39358304	protein_coding	Olfr958	exon	ENSMUSG00000050853	NonProperStrand	266	chr4	116828378	116828453	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-5.4404
chr4	131865380	131865503	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	chr7	134671388	134671516	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	13	-12.1727
chr5	138603555	138603992	protein_coding	Cops6	exon	ENSMUSG00000019494	ProperStrand	12	chr4	131865885	131865975	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.6729
chr16	23110454	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	chr7	150717297	150717426	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	42	-7.6768
chr10	79499012	79499327	protein_coding	Polr2e	utr3	ENSMUSG00000004667	ProperStrand	37	chr4	131908264	131908344	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.1700
chr15	82980073	82980192	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr8	129468745	129468875	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	4	-1.1961
chr5	100508727	100508745	protein_coding	Tmem150c	utr3	ENSMUSG00000050640	ProperStrand	4	chr8	32260381	32260426	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-10.2255
chr9	56956532	56956582	protein_coding	Sin3a	exon	ENSMUSG00000042557	ProperStrand	108	chr17	13112519	13112585	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-3.4762
chr5	135096231	135096287	protein_coding	Eif4h	utr3	ENSMUSG00000040731	ProperStrand	46	chr7	116663716	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.9772
chr4	117893112	117895835	protein_coding	Ptprf	exon	ENSMUSG00000033295	ProperStrand	337	chr5	108336470	108336490	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-1.7999
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr8	73115775	73115791	protein_coding	Ell	utr3	ENSMUSG00000070002	NonProperStrand	134	1	-11.5395
mmu-miR-2137	1	20	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	chr9	15118348	15118378	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-1.9529
chr2	25119068	25119382	protein_coding	Tprn	exon	ENSMUSG00000048707	ProperStrand	18	chr16	23110827	23110998	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	9	-19.0099
chr9	50816824	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	chr10	80641694	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	2	-9.8440
chr3	138589783	138589873	protein_coding	Rap1gds1	utr3	ENSMUSG00000028149	ProperStrand	16	chr4	131908274	131908354	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.6705
chr13	97266647	97266664	protein_coding	Polk	exon	ENSMUSG00000021668	NonProperStrand	25	chr2	26494708	26494808	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.7537
chr9	64023678	64023746	snoRNA	ENSMUSG00000064918_SNORD18	.	ENSMUSG00000064918	ProperStrand	370	chr7	116664806	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	5	-2.6815
chr16	90386835	90386853	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	chr4	122968645	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-5.2041
chr17	65071878	65071968	protein_coding	Man2a1	intron	ENSMUSG00000024085	ProperStrand	20	chr4	131865856	131865936	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.6810
chr5	37668479	37668497	protein_coding	Crmp1	intron	ENSMUSG00000029121	ProperStrand	85	chr9	78328089	78328222	protein_coding	Eef1a1	exon	ENSMUSG00000037742	NonProperStrand	16	2	-19.3956
chr5	121655136	121656817	protein_coding	Rpl6	exon	ENSMUSG00000029614	ProperStrand	332	chr1	162967514	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-1.6354
chr3	54549032	54549074	protein_coding	Alg5	exon	ENSMUSG00000036632	ProperStrand	2	chr4	131825994	131826047	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	1	-16.6824
chr12	60141474	60141509	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	chr3	153574608	153574653	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	4	-11.1984
chr15	79913288	79913321	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chrX	34622550	34622617	protein_coding	Rpl39	utr3	ENSMUSG00000079641	ProperStrand	37	2	-7.5114
chr1	63098058	63098109	protein_coding	Ino80d	utr3	ENSMUSG00000040865	ProperStrand	70	chr7	118219608	118219694	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-3.8803
mmu-miR-6240	3	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr4	43943351	43943367	protein_coding	Reck	intron	ENSMUSG00000028476	NonProperStrand	36	1	-6.9163
chr2	158182213	158182280	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	chr2	166890543	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	2	-0.9974
chrX	140808171	140808236	protein_coding-noncoding	Alg13	utr3	ENSMUSG00000041718	ProperStrand	87	chr16	23111770	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-5.7290
chr9	66637557	66638425	protein_coding	Aph1b	exon	ENSMUSG00000032375	ProperStrand	2	chr4	131865384	131865474	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	2	-inf
chr13	38620210	38620259	protein_coding	Txndc5	utr5	ENSMUSG00000038991	ProperStrand	48	chr4	131866154	131866244	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	3	-9.9387
chr6	119054931	119054949	protein_coding	Cacna1c	intron	ENSMUSG00000051331	ProperStrand	46	chr12	110923176	110923231	snoRNA	ENSMUSG00000084487_SNORD113	.	ENSMUSG00000084487	ProperStrand	183	2	-18.3147
chr2	166771687	166771711	protein_coding	Cse1l	utr3	ENSMUSG00000002718	ProperStrand	22	chr10	23505152	23505253	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.8416
chr9	21934462	21934478	protein_coding	Acp5	exon	ENSMUSG00000001348	ProperStrand	66	chr19	41947521	41948247	protein_coding	Rrp12	exon	ENSMUSG00000035049	ProperStrand	106	1	-11.9786
chr4	145740123	145740162	protein_coding	Gm13251	intron	ENSMUSG00000070605	ProperStrand	6	chr16	23110908	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-10.1290
chr11	116841063	116841096	protein_coding	Mgat5b	intron	ENSMUSG00000043857	ProperStrand	21	chr9	120039543	120039622	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-8.7850
chr7	136645283	136645373	LTR	MTA_Mm	MaLR	chr7MTA_Mm136645242	NonProperStrand	1	chr9	68614420	68614500	protein_coding	Rora	intron	ENSMUSG00000032238	ProperStrand	25	1	-inf
chr10	127954169	127954363	protein_coding	Esyt1	exon	ENSMUSG00000025366	ProperStrand	31	chr10	23505152	23505192	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	8	-19.6375
chr15	81470879	81470933	protein_coding	Ep300	exon	ENSMUSG00000055024	ProperStrand	118	chr4	131908236	131908296	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-3.2509
chrX	132673816	132673833	protein_coding	Bex4	intron	ENSMUSG00000047844	NonProperStrand	70	chr4	96412508	96412526	protein_coding	Gm12695	intron	ENSMUSG00000078639	ProperStrand	110	1	-11.7865
chr1	181027187	181027205	protein_coding	Smyd3	intron	ENSMUSG00000055067	ProperStrand	231	chr9	64024929	64024979	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	1	-6.4613
chr14	65372834	65372890	snoRNA	ENSMUSG00000064442_SNORA36	.	ENSMUSG00000064442	ProperStrand	296	chr10	107800719	107800795	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	8	-20.5244
chr2	174156209	174156226	protein_coding	AL593857.1	intron	ENSMUSG00000090625	ProperStrand	13	chr10	23505238	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.8218
chr3	108229848	108230216	protein_coding	Sars	exon	ENSMUSG00000068739	ProperStrand	45	chr3	123210890	123210970	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.5489
chr10	110918533	110918623	protein_coding	Nap1l1	intron	ENSMUSG00000058799	ProperStrand	185	chr11	69481392	69481472	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-1.3557
chr13	62533229	62533309	SINE	B2_Mm1t	B2	chr13B2_Mm1t62533149	ProperStrand	1	chr13	62533467	62533557	SINE	B2_Mm2	B2	chr13B2_Mm262533351	ProperStrand	1	1	-inf
chr18	75161108	75161173	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	chr9	120037902	120037944	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	4	-4.8353
chr11	101488779	101488879	snRNA	ENSMUSG00000065767_U2	.	ENSMUSG00000065767	ProperStrand	10	chr7	116664819	116664873	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	6	-20.3694
chr6	29505171	29505271	protein_coding	Tnpo3	exon	ENSMUSG00000012535	ProperStrand	58	chr1	162965989	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-6.2162
chr11	80080114	80080131	protein_coding	Rhot1	utr3	ENSMUSG00000017686	NonProperStrand	48	chr14	76247711	76247778	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-4.5978
chr2	172957825	172957841	antisense	1300015D01Rik	.	ENSMUSG00000087382	NonProperStrand	4	chr19	8963087	8963174	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	2	-20.7566
chr14	15572353	15572371	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr9	120038621	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.3899
chr7	31017803	31017976	protein_coding	Polr2i	exon	ENSMUSG00000019738	ProperStrand	1	chr2	172828192	172828247	protein_coding	Rae1	exon	ENSMUSG00000027509	ProperStrand	38	1	-inf
chr13	53073980	53073997	protein_coding	Nfil3	intron	ENSMUSG00000056749	NonProperStrand	66	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.1039
chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	chr6	71832550	71832688	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	2	-4.5479
chrX	104980311	104980362	protein_coding	2610002M06Rik	utr3	ENSMUSG00000031242	ProperStrand	3	chr10	106266059	106266075	protein_coding	Ppfia2	exon	ENSMUSG00000053825	ProperStrand	20	1	-inf
chr7	52381719	52381760	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	chr11	62418011	62418089	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	2	-1.5138
chr11	107493602	107496309	protein_coding	Helz	exon	ENSMUSG00000020721	ProperStrand	60	chr10	23505193	23505283	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-5.4215
chr19	42199431	42199447	protein_coding	Avpi1	exon	ENSMUSG00000018821	NonProperStrand	9	chrX	83132125	83132143	protein_coding	5430427O19Rik	intron	ENSMUSG00000025058	NonProperStrand	7	1	-20.3522
chr5	115939522	115939563	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr16	56035865	56035965	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	1	-3.6318
chr5	35622272	35622290	protein_coding	Adra2c	utr5	ENSMUSG00000045318	ProperStrand	8	chr2	118522424	118522489	protein_coding	Pak6	utr3	ENSMUSG00000074923	ProperStrand	3	1	-21.9894
chr10	79521385	79521436	protein_coding	Sbno2	exon	ENSMUSG00000035673	ProperStrand	23	chr7	52382753	52382823	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	3	-18.4213
chr19	10561593	10561693	SINE	ID_B1	B4	chr19ID_B110561502	ProperStrand	2	chr3	123210912	123210981	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-9.1566
chr17	13184992	13185013	protein_coding	Wtap	utr5	ENSMUSG00000060475	ProperStrand	119	chr1	162965983	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-4.2244
chrX	7449152	7449177	protein_coding	Otud5	exon	ENSMUSG00000031154	ProperStrand	79	chr3	88715213	88715230	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-6.6880
chr7	57041565	57041581	protein_coding	Prmt3	exon	ENSMUSG00000030505	ProperStrand	89	chr8	73419656	73419711	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.4395
chr10	63172704	63172722	protein_coding	Ctnna3	intron	ENSMUSG00000060843	ProperStrand	66	chr17	24371913	24371978	protein_coding	Ccnf	intron	ENSMUSG00000072082	ProperStrand	149	1	-11.2959
chr16	36915841	36915885	protein_coding	Golgb1	exon	ENSMUSG00000034243	ProperStrand	92	chr4	10928445	10928498	protein_coding	Plekhf2	intron	ENSMUSG00000049969	ProperStrand	12	3	-19.9876
chr9	115167595	115167611	protein_coding	Stt3b	exon	ENSMUSG00000032437	NonProperStrand	9	chr15	34370545	34370650	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	4	-21.3212
chr12	111929848	111930365	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr8	34894106	34894213	protein_coding	Rbpms	utr3	ENSMUSG00000031586	ProperStrand	58	2	-13.2641
chr3	89549870	89550522	protein_coding	Adar	exon	ENSMUSG00000027951	ProperStrand	52	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-6.8557
chr4	117903396	117903476	protein_coding	Ptprf	exon	ENSMUSG00000033295	ProperStrand	337	chr8	73419649	73419739	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	6	-5.8172
chr2	23504236	23504326	LINE	L1_Mur2	L1	chr2L1_Mur223504110	ProperStrand	1	chr2	23504824	23504904	LINE	Lx8	L1	chr2Lx823504812	ProperStrand	1	1	-inf
chr4	43505652	43505750	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	NonProperStrand	174	chr4	43505772	43505900	protein_coding-noncoding	Ccdc107	utr5	ENSMUSG00000028461	ProperStrand	106	102	-19.6956
chr5	148113281	148113297	protein_coding	Cdx2	utr3	ENSMUSG00000029646	ProperStrand	276	chr19	8799830	8799887	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-2.1731
chr3	95277740	95277830	protein_coding	Arnt	intron	ENSMUSG00000015522	ProperStrand	18	chr4	131865886	131865966	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	5	-16.6076
chr18	63238393	63238410	protein_coding	Fam38b	exon	ENSMUSG00000041482	NonProperStrand	50	chr9	120039567	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-6.2021
chr9	70182936	70182980	protein_coding	Myo1e	exon	ENSMUSG00000032220	ProperStrand	36	chr9	15119659	15119759	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-6.0511
chr7	29744722	29744822	protein_coding	Actn4	intron	ENSMUSG00000054808	ProperStrand	120	chr7	117190025	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.1280
chr9	62645444	62645526	protein_coding	Fem1b	exon	ENSMUSG00000032244	ProperStrand	111	chr2	26493366	26493455	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-2.6350
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr1	133141546	133141562	protein_coding	Rassf5	exon	ENSMUSG00000026430	ProperStrand	73	1	-5.5193
chr6	115757157	115757823	protein_coding	Rpl32	exon	ENSMUSG00000057841	ProperStrand	137	chr9	63042015	63042031	protein_coding	Map2k5	exon	ENSMUSG00000058444	ProperStrand	193	1	-9.3140
chr1	153602594	153602610	protein_coding	Edem3	utr5	ENSMUSG00000043019	ProperStrand	84	chr16	23111373	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	5	-5.5991
chr17	45707419	45707501	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr18	75161145	75161173	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	5	-12.0754
chr19	23306167	23306353	protein_coding	Smc5	exon	ENSMUSG00000024943	ProperStrand	146	chr11	97642952	97642971	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.1129
chr11	57297410	57297467	protein_coding	Fam114a2	utr3	ENSMUSG00000020523	ProperStrand	25	chr6	71832550	71832577	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	2	-11.8335
chr13	38592261	38592288	protein_coding	Txndc5	utr3	ENSMUSG00000038991	ProperStrand	48	chrX	93136011	93136027	protein_coding	Las1l	exon	ENSMUSG00000057421	ProperStrand	248	1	-10.9175
chr11	84722945	84722961	protein_coding	Myo19	exon	ENSMUSG00000020527	ProperStrand	82	chr7	86244450	86244468	protein_coding	Acan	exon	ENSMUSG00000030607	ProperStrand	38	1	-13.6087
chr4	126241214	126242178	protein_coding	Clspn	exon	ENSMUSG00000042489	ProperStrand	89	chr8	73419683	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.4395
chr18	77336285	77336353	protein_coding	Pias2	exon	ENSMUSG00000025423	ProperStrand	52	chr5	121655117	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.0158
chr16	90250589	90250609	protein_coding	Scaf4	exon	ENSMUSG00000022983	ProperStrand	44	chr10	43234220	43234236	protein_coding	Bend3	utr3	ENSMUSG00000038214	NonProperStrand	14	1	-17.0140
chr8	109068947	109069037	protein_coding	Cdh3	exon	ENSMUSG00000061048	ProperStrand	62	chr7	116664805	116664870	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.4926
chr11	100573614	100573661	protein_coding	Kat2a	exon	ENSMUSG00000020918	ProperStrand	68	chr2	181405343	181405359	protein_coding	Sox18	exon	ENSMUSG00000046470	ProperStrand	96	2	-18.4615
chr16	24984504	24984520	protein_coding	Lpp	utr3	ENSMUSG00000033306	NonProperStrand	189	chr8	73419657	73419757	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-3.8434
chr11	115659722	115659803	protein_coding	2310067B10Rik	utr3	ENSMUSG00000020747	ProperStrand	74	chr11	116938563	116938653	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-5.7469
chr16	23110453	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	chr9	15119287	15119427	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	31	-0.9198
chr12	3968611	3968627	protein_coding	Efr3b	exon	ENSMUSG00000020658	ProperStrand	142	chr15	79908961	79909019	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-3.8256
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr2	158205291	158205405	snoRNA	ENSMUSG00000064585_SNORA71	.	ENSMUSG00000064585	ProperStrand	418	1	-5.0952
chr16	20720632	20720660	protein_coding	Polr2h	exon	ENSMUSG00000021018	ProperStrand	11	chr11	69481335	69481411	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	5	-inf
chr11	69481335	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	chr12	92811869	92812014	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	7	-3.7704
chr17	35643325	35643415	protein_coding	Pou5f1	exon	ENSMUSG00000024406	ProperStrand	104	chr4	56910531	56910611	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-5.0330
chr10	119286688	119286704	protein_coding	Grip1	intron	ENSMUSG00000034813	ProperStrand	38	chr18	35714220	35716840	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-7.1972
chr4	64785559	64785575	protein_coding	Pappa	utr5	ENSMUSG00000028370	ProperStrand	65	chr14	124243064	124243081	protein_coding	Itgbl1	exon	ENSMUSG00000032925	ProperStrand	159	1	-11.1965
chr9	70960077	70960093	protein_coding	Aqp9	exon	ENSMUSG00000032204	NonProperStrand	118	chr10	39978363	39978485	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-4.1596
chr3	94874850	94875815	protein_coding	Pip5k1a	exon	ENSMUSG00000028126	ProperStrand	47	chr7	38354919	38354935	protein_coding	Zfp536	exon	ENSMUSG00000043456	NonProperStrand	236	1	-11.0595
chr19	3591815	3593568	protein_coding	Lrp5	exon	ENSMUSG00000024913	ProperStrand	145	chr1	162966009	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-3.7077
chr7	31928725	31928742	protein_coding	Gramd1a	exon	ENSMUSG00000001248	ProperStrand	24	chr2	26767620	26767639	protein_coding	Rpl7a	exon	ENSMUSG00000062647	ProperStrand	234	1	-12.4392
chr8	73056484	73056533	protein_coding	Fkbp8	exon	ENSMUSG00000019428	ProperStrand	52	chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	1	-10.1199
chr9	78023109	78023162	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr17	10400667	10400717	protein_coding	Qk	utr3	ENSMUSG00000062078	ProperStrand	63	1	-5.7820
chr13	58400751	58400770	protein_coding	Kif27	intron	ENSMUSG00000060176	ProperStrand	75	chr17	24857717	24857776	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.9322
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr3	157729963	157729979	protein_coding	Lrrc40	utr3	ENSMUSG00000063052	ProperStrand	147	1	-4.1744
chr15	81110991	81111009	SINE	ID4	ID	chr15ID481110956	ProperStrand	272	chr5	135035007	135035025	protein_coding	Syna	exon	ENSMUSG00000085957	ProperStrand	2	2	-inf
chr5	14252800	14252816	protein_coding	Sema3e	utr3	ENSMUSG00000063531	ProperStrand	125	chr11	68886975	68887053	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-2.8018
chr5	28668944	28669009	protein_coding	Rbm33	exon	ENSMUSG00000048271	ProperStrand	78	chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	1	-8.0683
chr6	88228359	88228395	protein_coding	Eefsec	intron	ENSMUSG00000033216	ProperStrand	23	chr11	62418060	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-7.4652
chr14	99090051	99090070	SINE	ID_B1	B4	chr14ID_B199089986	ProperStrand	12	chr8	108632805	108632905	protein_coding	Nfatc3	exon	ENSMUSG00000031902	ProperStrand	75	10	-inf
chr10	59764563	59764599	protein_coding	Psap	utr3	ENSMUSG00000004207	ProperStrand	124	chr5	65952377	65952395	protein_coding	Ube2k	intron	ENSMUSG00000029203	ProperStrand	289	1	-8.7082
chr5	108249338	108249366	protein_coding	Evi5	intron	ENSMUSG00000011831	ProperStrand	18	chr9	99483993	99484009	protein_coding	Dbr1	exon	ENSMUSG00000032469	ProperStrand	162	1	-13.7645
chr2	144199037	144199112	protein_coding	Csrp2bp	utr5	ENSMUSG00000027425	ProperStrand	32	chr19	8798522	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	5	-20.0844
chr4	126904277	126904299	protein_coding	Dlgap3	intron	ENSMUSG00000042388	ProperStrand	12	chr1	66521957	66521973	protein_coding	Unc80	intron	ENSMUSG00000055567	NonProperStrand	212	1	-14.0613
mmu-miR-6240	2	26	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr2	4544718	4544734	protein_coding	Prpf18	utr3	ENSMUSG00000039449	NonProperStrand	66	1	-5.7165
chr17	75625523	75625570	protein_coding	Ltbp1	intron	ENSMUSG00000001870	ProperStrand	136	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	1	-5.4176
chr7	116663631	116663731	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	NonProperStrand	51	chr15	79908968	79909020	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	NonProperStrand	3	2	-inf
chr6	125124088	125124188	protein_coding	Ncapd2	intron	ENSMUSG00000038252	ProperStrand	170	chr11	6428035	6428088	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.4698
chr4	3762132	3762404	protein_coding	Rps20	exon	ENSMUSG00000028234	ProperStrand	71	chr2	144087333	144087413	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-6.2129
chr7	52380948	52382867	protein_coding	Rpl13a	exon	ENSMUSG00000074129	ProperStrand	269	chr9	120038627	120038672	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-1.5756
chr5	137773844	137773863	protein_coding	Slc12a9	exon	ENSMUSG00000037344	NonProperStrand	6	chr12	112779227	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-9.4649
chr7	133722978	133723851	protein_coding	Cln3	exon	ENSMUSG00000030720	ProperStrand	87	chr1	88252838	88252877	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	2	-9.6124
chr14	55476645	55476661	protein_coding	Homez	exon	ENSMUSG00000057156	NonProperStrand	127	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-4.3919
chr2	41199972	41199989	protein_coding	Lrp1b	exon	ENSMUSG00000049252	ProperStrand	376	chr17	24856618	24856753	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-2.9440
chr12	112907738	112907790	protein_coding	Ckb	utr3	ENSMUSG00000001270	ProperStrand	28	chr7	52381737	52381759	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-9.1064
chr13	44980174	44998302	protein_coding	Jarid2	exon	ENSMUSG00000038518	ProperStrand	372	chr8	73419656	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-1.8819
chr8	125143660	125144185	protein_coding	Pabpn1l	exon	ENSMUSG00000069867	ProperStrand	1	chr1	162965531	162965588	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-inf
chr1	21124843	21124933	LINE	L1Md_F2	L1	chr1L1Md_F221124843	NonProperStrand	1	chr1	21124687	21124777	LTR	RMER19C	ERVK	chr1RMER19C21124243	ProperStrand	1	1	-inf
chr14	51427290	51427398	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr2	69366836	69366885	protein_coding	Lrp2	intron	ENSMUSG00000027070	ProperStrand	35	7	-inf
chr9	119231440	119231501	protein_coding	Oxsr1	utr5	ENSMUSG00000036737	ProperStrand	33	chr8	73419657	73419757	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.2424
chrX	11635848	11635865	protein_coding	Bcor	exon	ENSMUSG00000040363	NonProperStrand	293	chr1	89681362	89681395	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-2.5007
chr16	78540864	78540916	Simple_repeat	(CA)n	Simple_repeat	chr16(CA)n78540874	ProperStrand	1	chr11	33745818	33745834	protein_coding	Kcnip1	intron	ENSMUSG00000053519	ProperStrand	45	1	-inf
chr17	67632876	67632894	protein_coding	Ptprm	intron	ENSMUSG00000033278	ProperStrand	20	chr3	68889026	68889046	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-5.3533
chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	chr19	8963089	8963179	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.0628
chr1	39131092	39131108	LINE	Lx5	L1	chr1Lx539130966	ProperStrand	3	chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-12.7981
chr4	131908226	131908269	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr10	56108143	56108208	protein_coding	Gja1	exon	ENSMUSG00000050953	ProperStrand	70	1	-6.9529
chr1	66741087	66741103	protein_coding	Unc80	exon	ENSMUSG00000055567	NonProperStrand	212	chr1	162966812	162966860	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-3.8285
chr14	3210453	3210543	processed_transcript	Gm17188	.	ENSMUSG00000091849	ProperStrand	1	chr14	3051293	3051383	protein_coding	Gm2897	intron	ENSMUSG00000079410	NonProperStrand	1	1	-inf
chr2	18128556	18128646	protein_coding	Mllt10	exon	ENSMUSG00000026743	ProperStrand	30	chr19	8963086	8963166	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.5028
chr2	164311966	164311983	protein_coding	Dbndd2	utr5	ENSMUSG00000017734	ProperStrand	53	chr9	64022855	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-8.2737
chr13	88569463	88569483	LTR	RMER6D	ERVK	chr13RMER6D88569354	ProperStrand	42	chr16	23110457	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	6	-16.8389
chr2	90235314	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	115939471	115939566	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	2	-0.8060
chr19	8963025	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	chr15	79908930	79909019	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	40	-4.4166
chr11	115448910	115449000	protein_coding	Gga3	exon	ENSMUSG00000020740	ProperStrand	44	chr2	26246646	26247413	protein_coding	Pmpca	exon	ENSMUSG00000026926	ProperStrand	45	1	-14.5228
chr6	86476649	86476696	lincRNA	1600020E01Rik	exon	ENSMUSG00000086488	ProperStrand	2	chr7	52714025	52714548	protein_coding	Ftl1	exon	ENSMUSG00000050708	ProperStrand	807	1	-15.5707
chr17	12885646	12912805	protein_coding	Igf2r	exon	ENSMUSG00000023830	ProperStrand	151	chr10	23505152	23505242	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-1.2537
chr7	36220529	36220545	protein_coding	Ccdc123	exon	ENSMUSG00000023072	NonProperStrand	5	chr18	82806336	82806354	protein_coding	Zfp236	exon	ENSMUSG00000041258	NonProperStrand	117	1	-17.0699
chr14	8782876	8782976	protein_coding	Flnb	exon	ENSMUSG00000025278	ProperStrand	124	chr2	26768368	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	2	-7.0246
chr8	125626831	125627098	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	chr17	35299542	35299632	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-2.3213
chr7	51886922	51886943	protein_coding	Myh14	exon	ENSMUSG00000030739	ProperStrand	29	chr11	62418027	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	6	-20.1357
chr9	22165409	22184582	protein_coding	Anln	exon	ENSMUSG00000036777	ProperStrand	133	chr16	23111372	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-2.4527
chr6	122273145	122273172	protein_coding	Phc1	exon	ENSMUSG00000040669	ProperStrand	158	chr7	52382247	52382315	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	3	-14.5038
chr4	131865855	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr5	135529887	135529991	snoRNA	ENSMUSG00000088008_SCARNA20	.	ENSMUSG00000088008	ProperStrand	139	5	-4.8201
chr4	116826697	116826765	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	chr15	79908936	79908992	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	3	-1.4019
chr6	142719049	142719697	protein_coding	Cmas	exon	ENSMUSG00000030282	ProperStrand	14	chr17	35089181	35089239	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-8.4048
chr1	54361816	54371000	protein_coding	Ccdc150	exon	ENSMUSG00000025983	ProperStrand	56	chr11	72213890	72214879	protein_coding	Smtnl2	exon	ENSMUSG00000045667	ProperStrand	30	3	-22.0162
chr10	80246660	80247328	protein_coding	Dot1l	exon	ENSMUSG00000061589	ProperStrand	48	chr11	97642979	97643059	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.8600
chr2	90235296	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	120300388	120300404	protein_coding	Capn3	intron	ENSMUSG00000079110	NonProperStrand	18	1	-6.8363
chr2	179912989	179914317	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr5	74489561	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	10	-15.1092
chr8	107828124	107828512	protein_coding	E2f4	exon	ENSMUSG00000014859	ProperStrand	32	chr11	98878387	98878453	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-7.5373
chr19	30219755	30219825	protein_coding	Gldc	exon	ENSMUSG00000024827	ProperStrand	175	chr15	34370545	34370624	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-1.7190
chr1	166186947	166187057	protein_coding	Slc19a2	exon	ENSMUSG00000040918	ProperStrand	22	chr9	120039533	120039557	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-8.6421
chr2	121275829	121275929	protein_coding-noncoding	Serf2	utr5	ENSMUSG00000074884	ProperStrand	5	chr6	115757991	115758043	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-10.5899
chr4	129323649	129323744	protein_coding	Kpna6	utr3	ENSMUSG00000003731	ProperStrand	39	chr15	34370545	34370596	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-4.3595
chr18	42805538	42805554	protein_coding	Ppp2r2b	exon	ENSMUSG00000024500	NonProperStrand	95	chr2	5831938	5831986	protein_coding	Dhtkd1	intron	ENSMUSG00000025815	ProperStrand	46	2	-20.6064
chr10	5992679	6063978	protein_coding	Akap12	exon	ENSMUSG00000038587	ProperStrand	1008	chr15	98356775	98356913	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	3	-6.3467
chr7	52262155	52262229	protein_coding	Scaf1	exon	ENSMUSG00000038406	ProperStrand	81	chr15	34370546	34370623	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-3.0044
chr1	137995413	137995430	protein_coding	Cacna1s	intron	ENSMUSG00000026407	NonProperStrand	37	chr11	102769592	102769616	protein_coding	Kif18b	exon	ENSMUSG00000051378	ProperStrand	43	1	-14.9648
chrX	84483705	84483728	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr11	6520321	6520421	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	6	-15.6328
chr19	43931099	43941096	protein_coding	Dnmbp	exon	ENSMUSG00000025195	ProperStrand	15	chr14	76247795	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-6.9035
chr14	104049599	104049699	protein_coding	Slain1	exon	ENSMUSG00000055717	ProperStrand	6	chr10	23505152	23505212	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-5.3874
chr5	135720558	135720615	protein_coding	Baz1b	utr3	ENSMUSG00000002748	ProperStrand	83	chr7	117190023	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.7523
chr15	99236384	99236626	protein_coding	Tmbim6	exon	ENSMUSG00000023010	ProperStrand	64	chr5	74489629	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	2	-6.2015
chr7	52382138	52382368	protein_coding	Rpl13a	exon	ENSMUSG00000074129	ProperStrand	269	chr8	32260335	32260414	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-1.9475
chr8	30460373	30460390	LINE	L1MA7	L1	chr8L1MA730460133	NonProperStrand	7	chr9	59410832	59410850	protein_coding	Hexa	exon	ENSMUSG00000025232	ProperStrand	12	1	-21.2490
chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr2	139519127	139519144	protein_coding	Ism1	intron	ENSMUSG00000074766	NonProperStrand	10	1	-10.0944
chr5	102443022	102443040	protein_coding	Wdfy3	intron	ENSMUSG00000043940	NonProperStrand	10	chr19	8963027	8963083	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.6521
chr14	64081493	64081513	protein_coding	Fam167a	utr3	ENSMUSG00000035095	ProperStrand	80	chr16	23110828	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	11	-9.1863
chr17	46158588	46158666	protein_coding	Vegfa	intron	ENSMUSG00000023951	ProperStrand	43	chr11	82802991	82803036	protein_coding	Slfn9	intron	ENSMUSG00000069793	ProperStrand	5	4	-inf
chr10	62269658	62269744	protein_coding	Tet1	utr3	ENSMUSG00000047146	ProperStrand	286	chr7	52382753	52382802	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	4	-12.2372
chr7	30709406	30709496	LTR	RMER19A	ERVK	chr7RMER19A30709269	ProperStrand	1	chr16	23110916	23110996	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	75094306	75094322	LINE	Lx9	L1	chr4Lx975094037	ProperStrand	41	1	-5.1984
chr2	151545295	151545312	protein_coding	Psmf1	exon	ENSMUSG00000032869	NonProperStrand	3	chr6	71832654	71832687	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-11.9355
chr19	16207663	16207763	protein_coding	Gnaq	utr5	ENSMUSG00000024639	ProperStrand	38	chr7	52084574	52084614	protein_coding	Nup62	exon	ENSMUSG00000043858	ProperStrand	47	1	-14.7481
chr2	90235301	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr14	117461654	117461674	protein_coding	Gpc6	intron	ENSMUSG00000058571	NonProperStrand	31	1	-5.7479
chr14	58425807	58425897	protein_coding	F630043A04Rik	utr3	ENSMUSG00000021965	ProperStrand	24	chr19	8798740	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	2	-10.7128
chr4	141043520	141043923	protein_coding	Spen	exon	ENSMUSG00000040761	ProperStrand	161	chr12	106269463	106269543	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-2.3641
chr4	151730301	151730737	protein_coding	Chd5	exon	ENSMUSG00000005045	NonProperStrand	147	chr17	48059249	48059267	protein_coding	Foxp4	intron	ENSMUSG00000023991	NonProperStrand	1	1	-inf
chr4	132619286	132620312	protein_coding	Ahdc1	exon	ENSMUSG00000037692	ProperStrand	100	chr16	23111445	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-1.3593
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr4	126011545	126011596	protein_coding	Eif2c3	utr3	ENSMUSG00000028842	ProperStrand	8	1	-10.4808
chr7	50690726	50690742	protein_coding	Lim2	exon	ENSMUSG00000004613	NonProperStrand	50	chr18	73693119	73693137	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-5.8818
chr7	34936081	34939566	protein_coding	Uba2	exon	ENSMUSG00000052997	ProperStrand	165	chr18	73693107	73693134	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-3.5968
chr9	85636990	85637090	protein_coding	Ibtk	exon	ENSMUSG00000035941	ProperStrand	14	chr6	125063974	125064016	protein_coding	Chd4	exon	ENSMUSG00000063870	ProperStrand	303	1	-13.0323
chr8	24367267	24367499	protein_coding	Golga7	utr5	ENSMUSG00000015341	ProperStrand	36	chr11	60370927	60370943	protein_coding	Alkbh5	utr3	ENSMUSG00000042650	ProperStrand	203	1	-11.8999
chr2	27303658	27303717	protein_coding	Brd3	utr3	ENSMUSG00000026918	ProperStrand	85	chr13	22371130	22371147	protein_coding	Vmn1r195	exon	ENSMUSG00000069296	ProperStrand	5	1	-17.5554
chr9	57751010	57751090	LTR	MTD	MaLR	chr9MTD57750844	ProperStrand	1	chr9	57750697	57750787	SINE	B1_Mm	Alu	chr9B1_Mm57750699	NonProperStrand	1	1	-inf
chr4	131908776	131908866	lincRNA	Gm17300	exon	ENSMUSG00000091021	ProperStrand	109	chr4	140552608	140552688	protein_coding	Atp13a2	exon	ENSMUSG00000036622	NonProperStrand	3	1	-18.5322
chr15	97897282	97906245	protein_coding	Senp1	exon	ENSMUSG00000033075	ProperStrand	24	chr7	117166731	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	3	-15.1845
chr17	24213343	24213391	protein_coding	Pdpk1	utr3	ENSMUSG00000024122	ProperStrand	18	chr16	23110959	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7867
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	34066337	34073998	protein_coding	Fgfr3	exon	ENSMUSG00000054252	ProperStrand	13	2	-12.1218
chr17	35272362	35273095	protein_coding	Bag6	utr5	ENSMUSG00000024392	ProperStrand	181	chr9	21207828	21207915	protein_coding	Ilf3	exon	ENSMUSG00000032178	ProperStrand	164	1	-9.0829
chr2	173092335	173092352	protein_coding	Pmepa1	intron	ENSMUSG00000038400	NonProperStrand	13	chr14	54888533	54888610	protein_coding	Abhd4	utr3	ENSMUSG00000040997	ProperStrand	21	1	-18.7094
chr8	70356139	70356239	protein_coding	Psd3	intron	ENSMUSG00000030465	ProperStrand	19	chr7	118219574	118219600	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-6.4226
chr5	142459850	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	chr13	49779747	49779802	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-4.3947
chr11	83254019	83254035	protein_coding	1700020L24Rik	exon	ENSMUSG00000035085	NonProperStrand	88	chrX	34622991	34623037	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-2.4973
chr6	121135843	121135933	protein_coding-noncoding	Pex26	utr5	ENSMUSG00000067825	ProperStrand	1	chr6	121135620	121135710	protein_coding	Pex26	intron	ENSMUSG00000067825	ProperStrand	2	1	-inf
chr11	6248360	6248732	protein_coding	Ogdh	exon	ENSMUSG00000020456	ProperStrand	42	chr7	148634708	148634798	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	4	-14.7947
chr7	133611554	133612024	protein_coding	Sh2b1	exon	ENSMUSG00000030733	ProperStrand	17	chr4	131908348	131908438	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-6.1110
chr18	10052132	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr5	71487027	71487044	protein_coding	Gabra2	utr5	ENSMUSG00000000560	NonProperStrand	15	1	-11.6168
chr2	121248262	121260543	protein_coding	Pdia3	exon	ENSMUSG00000027248	ProperStrand	74	chr7	29136573	29136653	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-3.6487
chr1	58477173	58477223	protein_coding-noncoding	Clk1	utr3	ENSMUSG00000026034	ProperStrand	1	chr10	23505152	23505204	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-inf
chr18	80325753	80325803	protein_coding	Adnp2	exon	ENSMUSG00000053950	ProperStrand	36	chr17	24857777	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-5.5020
chr8	125627171	125627235	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	1	-7.3835
chr6	120382160	120382233	protein_coding	Kdm5a	exon	ENSMUSG00000030180	ProperStrand	57	chr17	35087894	35087937	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-5.3000
chr16	36913431	36913452	protein_coding	Golgb1	exon	ENSMUSG00000034243	ProperStrand	92	chr11	77996560	77996616	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-5.2557
chr15	81208127	81208179	protein_coding	St13	exon	ENSMUSG00000022403	ProperStrand	59	chr1	36757982	36758047	protein_coding	Actr1b	exon	ENSMUSG00000037351	ProperStrand	14	3	-inf
chr6	135029090	135029107	protein_coding	Gprc5a	exon	ENSMUSG00000046733	ProperStrand	7	chr9	64023228	64023287	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	1	-12.8654
chr7	13516150	13516200	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr19	8800355	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	3	-1.2442
chr10	86156197	86156253	protein_coding	Hsp90b1	exon	ENSMUSG00000020048	ProperStrand	396	chrX	54591516	54591551	protein_coding	Arhgef6	exon	ENSMUSG00000031133	ProperStrand	20	3	-19.1963
chr19	55573065	55573742	protein_coding	Vti1a	exon	ENSMUSG00000024983	ProperStrand	14	chr9	65120741	65120757	protein_coding	Cilp	exon	ENSMUSG00000042254	ProperStrand	212	1	-13.7456
chr17	28465964	28467540	protein_coding	Rpl10a	exon	ENSMUSG00000037805	ProperStrand	121	chr10	23505152	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-1.7594
chr2	90235291	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	85689747	85689763	protein_coding	Tbc1d9	utr5	ENSMUSG00000031709	ProperStrand	66	2	-7.1528
chr17	56419181	56425874	protein_coding	Plin3	exon	ENSMUSG00000024197	ProperStrand	23	chr16	23110922	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	9	-18.0851
chr16	42895730	42895765	protein_coding	Zbtb20	intron	ENSMUSG00000022708	ProperStrand	28	chr16	23111448	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.4504
chr17	56966686	56970176	protein_coding	Rfx2	intron	ENSMUSG00000024206	ProperStrand	32	chr11	69483136	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-6.0958
chr10	87892264	87892282	protein_coding	Gnptab	exon	ENSMUSG00000035311	ProperStrand	65	chr1	89681249	89681349	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-5.2849
chr9	66368262	66368342	protein_coding-noncoding	Usp3	utr3	ENSMUSG00000032376	ProperStrand	1	chr9	66368073	66368163	protein_coding	Usp3	exon	ENSMUSG00000032376	ProperStrand	18	1	-inf
chr18	75161534	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	chr19	8800084	8800128	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	2	-3.4334
chr11	45903962	45903991	protein_coding	Adam19	intron	ENSMUSG00000011256	ProperStrand	134	chr4	118805706	118805833	protein_coding	Slc2a1	exon	ENSMUSG00000028645	ProperStrand	361	1	-8.1111
chr16	69864288	69864306	LINE	Lx2A1	L1	chr16Lx2A169863625	NonProperStrand	22	chr1	36849857	36849911	protein_coding	Tmem131	exon	ENSMUSG00000026116	ProperStrand	129	1	-13.8124
chr4	134881035	134881115	protein_coding	Srrm1	exon	ENSMUSG00000028809	ProperStrand	142	chr7	29136556	29136646	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	7	-10.2505
chr10	90581138	90581174	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	chr12	81492646	81492736	snoRNA	ENSMUSG00000088158_Scarna3b	.	ENSMUSG00000088158	ProperStrand	147	1	-3.1327
chr14	15572355	15572371	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr10	122217001	122217018	protein_coding	Ppm1h	intron	ENSMUSG00000034613	ProperStrand	51	1	-11.6111
chr10	122702149	122702167	protein_coding	Fam19a2	utr5	ENSMUSG00000044071	NonProperStrand	52	chr9	22046990	22047044	protein_coding	Zfp809	intron	ENSMUSG00000057982	ProperStrand	10	1	-17.1981
chr11	90400410	90400438	pseudogene	Gm11512	.	ENSMUSG00000081043	ProperStrand	2	chr16	23110911	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr8	91555029	91555108	protein_coding	Sall1	exon	ENSMUSG00000031665	ProperStrand	96	chr11	69481368	69481458	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	7	-16.6780
chr6	38461895	38461912	protein_coding	Ubn2	utr3	ENSMUSG00000038538	ProperStrand	86	chr8	73419683	73419742	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.4979
chr2	63936035	63936053	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr5	115940332	115940405	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	2	-5.8411
chrX	147476948	147476965	SINE	RSINE1	B4	chrXRSINE1147476844	NonProperStrand	20	chr7	29136551	29136645	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.3737
chr3	88165751	88165842	protein_coding	Smg5	utr3	ENSMUSG00000001415	ProperStrand	70	chr18	35716863	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-5.3431
chr7	60858101	60858118	LTR	RMER13B	ERVK	chr7RMER13B60857764	NonProperStrand	3	chr17	35089182	35089229	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-11.8056
chr18	36564081	36564100	protein_coding	Pfdn1	exon	ENSMUSG00000024346	ProperStrand	12	chr19	5293241	5294320	protein_coding	Sf3b2	exon	ENSMUSG00000024853	ProperStrand	102	1	-15.5309
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr11	62416582	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-1.5139
chr8	28284934	28285024	protein_coding	Rab11fip1	exon	ENSMUSG00000031488	ProperStrand	8	chr10	110918549	110918629	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-7.4365
chr1	115800766	115800807	lincRNA	9330185C12Rik	intron	ENSMUSG00000086520	ProperStrand	45	chr4	131908264	131908354	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.8531
chr1	182611339	182611386	protein_coding	Lin9	exon	ENSMUSG00000058729	ProperStrand	7	chr16	23111385	23111475	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-5.0992
chr4	43505742	43505822	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr8	86243727	86243817	protein_coding	Ddx39	exon	ENSMUSG00000005481	ProperStrand	24	1	-4.7940
chr3	137849424	137849440	protein_coding	4930579F01Rik	utr5	ENSMUSG00000012042	NonProperStrand	156	chr15	77796590	77796635	protein_coding	Eif3d	exon	ENSMUSG00000016554	ProperStrand	69	1	-11.1146
chr13	68759738	68764669	protein_coding	Adcy2	exon	ENSMUSG00000021536	ProperStrand	237	chr17	35089184	35089229	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-2.9077
chr17	27258470	27258521	protein_coding	Itpr3	utr3	ENSMUSG00000042644	ProperStrand	137	chr16	92313157	92313173	protein_coding	Fam165b	utr3	ENSMUSG00000051989	ProperStrand	4	1	-17.3767
chr3	96132452	96132514	snRNA	ENSMUSG00000075978_U1	.	ENSMUSG00000075978	ProperStrand	132	chr17	35087896	35087926	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-3.7005
chr17	32986115	32986205	LTR	RLTR14	ERV1	chr17RLTR1432985915	NonProperStrand	1	chr17	32986252	32986332	Low_complexity	T-rich	Low_complexity	chr17T-rich32986264	NonProperStrand	1	1	-inf
chr11	50198223	50199313	protein_coding	Hnrnph1	exon	ENSMUSG00000007850	ProperStrand	49	chr17	24856620	24856682	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-6.8289
chr18	37890538	37890638	protein_coding	Pcdhga9	intron	ENSMUSG00000023036	ProperStrand	245	chr11	68886991	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-1.6940
chr11	78313939	78313956	protein_coding	Vtn	exon	ENSMUSG00000017344	ProperStrand	188	chr5	111082719	111082737	protein_coding	Ddx51	exon	ENSMUSG00000029504	ProperStrand	54	1	-11.2344
chr15	101923496	101926997	protein_coding	Eif4b	exon	ENSMUSG00000058655	ProperStrand	484	chr4	131865856	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	6	-0.9313
chr19	42018797	42018883	protein_coding	Mms19	utr3	ENSMUSG00000025159	ProperStrand	52	chr14	26547002	26547025	protein_coding	Zcchc24	intron	ENSMUSG00000055538	ProperStrand	42	6	-inf
chr2	103588240	103588355	protein_coding	Nat10	exon	ENSMUSG00000027185	NonProperStrand	64	chr7	148634701	148634775	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-3.8650
chr9	22136707	22136801	protein_coding	Anln	utr3	ENSMUSG00000036777	ProperStrand	133	chr17	71990969	71991001	snoRNA	ENSMUSG00000092713_CT010429.1	.	ENSMUSG00000092713	ProperStrand	182	5	-inf
chr3	94778661	94778677	protein_coding	Pi4kb	utr5	ENSMUSG00000038861	NonProperStrand	18	chr8	73419656	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-5.4264
chr9	57435425	57435441	protein_coding	Scamp2	utr3	ENSMUSG00000040188	NonProperStrand	16	chr4	131908811	131908871	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.4136
chr8	8639487	8660497	protein_coding	Efnb2	exon	ENSMUSG00000001300	NonProperStrand	14	chr16	48315783	48315828	protein_coding	Dppa2	exon	ENSMUSG00000072419	ProperStrand	9	1	-inf
chr15	7140888	7140928	protein_coding	Lifr	exon	ENSMUSG00000054263	ProperStrand	64	chr3	153573527	153573597	snoRNA	ENSMUSG00000064731_Snord45b	.	ENSMUSG00000064731	ProperStrand	205	1	-10.7192
chr12	113418084	113418100	protein_coding	Kif26a	exon	ENSMUSG00000021294	NonProperStrand	4	chr4	136547375	136547454	protein_coding	Zbtb40	intron	ENSMUSG00000060862	NonProperStrand	4	1	-inf
chr5	23825941	23825957	protein_coding	Kcnh2	exon	ENSMUSG00000038319	ProperStrand	242	chr5	121655127	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-2.6395
chr10	127521009	127521031	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr2	181316563	181316579	protein_coding	Uckl1	exon	ENSMUSG00000089917	ProperStrand	142	1	-6.9508
chr4	46485129	46485191	protein_coding	Anp32b	utr3	ENSMUSG00000028333	ProperStrand	229	chr16	96343938	96346343	protein_coding	Hmgn1	utr3	ENSMUSG00000040681	ProperStrand	38	1	-11.5491
chr1	84721244	84721260	protein_coding	Trip12	exon	ENSMUSG00000026219	NonProperStrand	8	chr10	39978385	39978475	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	NonProperStrand	27	2	-19.1506
chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	chr19	6985141	6985358	protein_coding	Trmt112	utr3	ENSMUSG00000038812	ProperStrand	6	1	-14.3353
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr19	8800085	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-4.7854
chr11	29445947	29446011	protein_coding	Rps27a	exon	ENSMUSG00000020460	ProperStrand	47	chr10	110918553	110918643	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-3.9024
chr1	66521957	66521973	protein_coding	Unc80	intron	ENSMUSG00000055567	NonProperStrand	212	chr2	89368462	89368478	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	1	-7.8354
chr12	110892838	110892904	snoRNA	ENSMUSG00000064621_AF357355	.	ENSMUSG00000064621	ProperStrand	60	chr17	24857742	24857832	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.2968
chr8	72928716	72928734	protein_coding	Crtc1	intron	ENSMUSG00000003575	ProperStrand	14	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-11.1346
chr9	40610585	40610675	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr5	111121120	111121200	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-1.7036
chr3	148480435	148480475	protein_coding	Lphn2	exon	ENSMUSG00000028184	ProperStrand	20	chr18	35714205	35714260	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-5.5524
chr8	126555000	126555016	protein_coding	Urb2	exon	ENSMUSG00000031976	ProperStrand	64	chr14	76247749	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-4.0501
chr3	99058192	99058215	protein_coding	Tbx15	intron	ENSMUSG00000027868	NonProperStrand	4	chr4	131908300	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-6.5415
chr18	67607958	67607974	protein_coding	Afg3l2	intron	ENSMUSG00000024527	ProperStrand	43	chr8	13416897	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-7.1164
chr1	162967490	162967511	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	chr6	125071814	125071878	snoRNA	ENSMUSG00000088208_SCARNA11	.	ENSMUSG00000088208	ProperStrand	113	2	-4.1763
chr2	83689494	83689513	protein_coding	Fam171b	intron	ENSMUSG00000048388	NonProperStrand	175	chr1	162966813	162966855	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-4.1874
chr11	4666547	4666588	protein_coding	Nf2	utr3	ENSMUSG00000009073	ProperStrand	72	chr1	162966019	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-3.2691
chr11	99885311	99885327	protein_coding	Krt33b	exon	ENSMUSG00000057723	NonProperStrand	352	chr2	26493364	26493494	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	7	-9.2565
chr11	119342971	119343052	protein_coding	Rnf213	intron	ENSMUSG00000070327	NonProperStrand	13	chr15	71624779	71624798	snoRNA	ENSMUSG00000088895_SNORA81	.	ENSMUSG00000088895	ProperStrand	348	1	-12.9067
chr10	77899940	77899971	protein_coding	Pdxk	utr3	ENSMUSG00000032788	ProperStrand	8	chr9	120039577	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	3	-16.9057
chr2	72322730	72322746	protein_coding	Cdca7	exon	ENSMUSG00000055612	NonProperStrand	1	chr18	33954827	33954917	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-inf
chr11	99885311	99885327	protein_coding	Krt33b	exon	ENSMUSG00000057723	NonProperStrand	352	chr12	88778723	88778754	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-3.1250
chr7	34994547	34994593	protein_coding-noncoding	Gpi1	utr3	ENSMUSG00000036427	ProperStrand	19	chr11	116938567	116938657	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-8.4659
chr2	32563527	32563545	protein_coding	Cdk9	exon	ENSMUSG00000009555	NonProperStrand	49	chr1	190267301	190267317	protein_coding	Ush2a	exon	ENSMUSG00000026609	NonProperStrand	60	1	-13.7280
chr17	56552613	56552669	protein_coding	Ptprs	utr3	ENSMUSG00000013236	ProperStrand	152	chr7	148634773	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-2.3228
chr9	57369195	57376787	protein_coding	Cox5a	exon	ENSMUSG00000000088	ProperStrand	26	chr19	27837820	27837836	protein_coding	Rfx3	utr3	ENSMUSG00000040929	ProperStrand	92	1	-14.1503
chr15	103024600	103024699	protein_coding	Cbx5	utr3	ENSMUSG00000009575	ProperStrand	98	chr1	162965999	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-2.7204
chr19	6123864	6123880	protein_coding	Snx15	exon	ENSMUSG00000024787	NonProperStrand	5	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-8.2678
chr8	26277777	26277855	protein_coding	Tacc1	intron	ENSMUSG00000065954	ProperStrand	12	chr1	88247741	88247799	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-8.3246
chr3	8930775	8930895	protein_coding	Tpd52	utr3	ENSMUSG00000027506	ProperStrand	37	chr7	52381973	52382011	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-7.6765
chr11	51457030	51457112	protein_coding	N4bp3	utr3	ENSMUSG00000001053	ProperStrand	45	chr6	94776856	94776875	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	4	-21.0987
chr3	68891387	68891460	protein_coding	Kpna4	exon	ENSMUSG00000027782	ProperStrand	21	chr2	32818822	32818912	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-7.5612
chr4	43505656	43505743	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr2	27282242	27282265	protein_coding	Vav2	utr5	ENSMUSG00000009621	ProperStrand	14	2	-9.6466
chr11	29445995	29446018	protein_coding	Rps27a	exon	ENSMUSG00000020460	ProperStrand	47	chr14	33005140	33005232	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	3	-10.7073
chr11	98860818	98860835	protein_coding	Top2a	intron	ENSMUSG00000020914	NonProperStrand	5	chr11	87240290	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	3	-19.1478
chr11	74673258	74673348	protein_coding	Sgsm2	exon	ENSMUSG00000038351	ProperStrand	60	chr5	130300460	130300540	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.5095
chr11	69266813	69266829	protein_coding	Dnahc2	exon	ENSMUSG00000005237	ProperStrand	95	chr7	116663683	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.7609
chr19	11857619	11859888	protein_coding	Stx3	exon	ENSMUSG00000041488	ProperStrand	37	chr7	29136602	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-5.5370
chr18	77388271	77388371	protein_coding	Pias2	intron	ENSMUSG00000025423	ProperStrand	52	chr1	162965551	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.5385
chr4	131908380	131908460	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr2	162473220	162473236	protein_coding	Ptprt	intron	ENSMUSG00000053141	ProperStrand	28	1	-8.7896
chr1	144601679	144601759	LINE	Lx8	L1	chr1Lx8144601083	NonProperStrand	1	chr1	144154903	144154993	LTR	MTE-int	MaLR	chr1MTE-int144154922	ProperStrand	1	1	-inf
chr6	24449963	24449979	protein_coding	Iqub	intron	ENSMUSG00000046192	ProperStrand	5	chr1	24621530	24621573	protein_coding	Gm10925	utr5	ENSMUSG00000090378	ProperStrand	320	1	-15.1177
chr4	134926614	134927796	protein_coding	A330049M08Rik	exon	ENSMUSG00000043924	ProperStrand	130	chr12	110874240	110874277	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	1	-8.4298
chr10	80291956	80291975	protein_coding	Oaz1	utr3	ENSMUSG00000035242	ProperStrand	49	chr17	24857798	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.6426
chr12	98609161	98609180	LINE	L1M2	L1	chr12L1M298609126	ProperStrand	5	chr8	32260373	32260422	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-9.7163
chr10	18393547	18393563	protein_coding	D10Bwg1379e	intron	ENSMUSG00000019852	NonProperStrand	120	chr16	23110455	23110509	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.3714
chr6	122268609	122268657	protein_coding	Phc1	exon	ENSMUSG00000040669	ProperStrand	158	chr1	88247741	88247804	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	3	-8.2061
chr10	39978350	39978440	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	chr4	116828389	116828452	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-1.1658
chr11	119136228	119136244	protein_coding	Gaa	exon	ENSMUSG00000025579	NonProperStrand	201	chr13	101541067	101541088	protein_coding	Cenph	intron	ENSMUSG00000045273	NonProperStrand	45	1	-11.4684
chr5	29895934	29895951	protein_coding	Ube3c	utr5	ENSMUSG00000039000	ProperStrand	48	chr7	116663664	116663728	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-7.4806
chr3	153575089	153575112	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	chr11	116938556	116938691	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-1.7631
chr19	61250666	61250756	LTR	MT2_Mm	ERVL	chr19MT2_Mm61250656	ProperStrand	2	chr5	13367511	13367601	protein_coding	Sema3a	intron	ENSMUSG00000028883	ProperStrand	7	1	-inf
chr4	43505795	43505875	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr2	130977089	130977179	protein_coding	1700037H04Rik	intron	ENSMUSG00000027327	ProperStrand	18	2	-8.8563
chr10	127179740	127179757	protein_coding	Zbtb39	exon	ENSMUSG00000044617	NonProperStrand	6	chr5	121655016	121655134	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-13.6219
chr5	77385571	77385607	protein_coding	Paics	exon	ENSMUSG00000029247	ProperStrand	78	chr1	89681146	89681236	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-4.9315
chr5	42136455	42136473	Low_complexity	GA-rich	Low_complexity	chr5GA-rich42136449	NonProperStrand	106	chr10	122432004	122432061	protein_coding	Mon2	utr3	ENSMUSG00000034602	ProperStrand	28	1	-13.7105
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr7	95266597	95266613	protein_coding	Grm5	intron	ENSMUSG00000049583	NonProperStrand	145	1	-4.2003
chr2	35026084	35026100	protein_coding	Cep110	exon	ENSMUSG00000057110	ProperStrand	20	chr17	39985568	39985668	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-8.1305
chr4	131865856	131865946	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr7	66931416	66931452	snoRNA	ENSMUSG00000075840_SNORD116	.	ENSMUSG00000075840	ProperStrand	2	2	-inf
chr12	106005330	106005348	protein_coding	Clmn	utr3	ENSMUSG00000021097	NonProperStrand	30	chr16	23111775	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-7.9239
chr19	45960460	45965738	protein_coding	9130011E15Rik	exon	ENSMUSG00000039901	ProperStrand	129	chr13	107679381	107679397	protein_coding	Ipo11	intron	ENSMUSG00000042590	NonProperStrand	8	3	-19.1285
chr11	69483155	69483237	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	chr1	173041599	173041649	tRNA	tRNA710-ValCAC	.	280082	ProperStrand	206	4	-3.5848
chr5	130295414	130295477	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	chr13	22028978	22029011	tRNA	tRNA980-SerAGA	.	191189	ProperStrand	3	3	-inf
chr17	24665297	24665453	antisense	2610019E17Rik	.	ENSMUSG00000093565	ProperStrand	24	chr17	24665455	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	2	-10.9288
chr1	121444026	121444044	protein_coding	Epb4.1l5	utr3	ENSMUSG00000026383	ProperStrand	22	chr2	34580600	34580658	protein_coding	Gapvd1	exon	ENSMUSG00000026867	ProperStrand	31	1	-16.6255
chr8	86451625	86462433	protein_coding	Lphn1	exon	ENSMUSG00000013033	ProperStrand	221	chr2	29926073	29926572	protein_coding	Set	exon	ENSMUSG00000054766	ProperStrand	167	2	-13.7352
chr5	125866416	125866460	protein_coding	Ubc	utr3	ENSMUSG00000008348	ProperStrand	13	chr4	131908809	131908892	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-6.5299
chr7	26118416	26118485	protein_coding	Megf8	intron	ENSMUSG00000045039	ProperStrand	100	chr9	64022850	64022921	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	7	-19.6999
chr9	40612422	40612441	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr13	113789095	113789112	protein_coding	Gm6320	exon	ENSMUSG00000074651	ProperStrand	26	1	-9.8247
chr9	44658042	44658133	protein_coding	Mll1	exon	ENSMUSG00000002028	ProperStrand	151	chr1	162966210	162966269	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	7	-inf
chr4	128209907	128209923	protein_coding	Csmd2	intron	ENSMUSG00000028804	NonProperStrand	34	chr1	88247814	88247876	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-6.2127
chr2	158182156	158182279	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	chr4	122970401	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	2	-0.8865
chr8	81030238	81030328	protein_coding	Rbmxl1	exon	ENSMUSG00000037070	ProperStrand	13	chr17	39985688	39985768	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-9.0150
chr11	5092380	5092480	protein_coding	Kremen1	utr3	ENSMUSG00000020393	ProperStrand	33	chr1	162965978	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-4.7374
chr17	45704934	45708375	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr15	79908783	79913349	protein_coding	Rpl3	exon	ENSMUSG00000060036	ProperStrand	8342	11	-2.9683
chr7	118219199	118219272	protein_coding	Eif4g2	intron	ENSMUSG00000005610	ProperStrand	134	chr7	117166761	117166851	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-3.3079
chr15	75726733	75726782	protein_coding	Eef1d	exon	ENSMUSG00000055762	ProperStrand	99	chrX	34622906	34622987	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	3	-6.1537
chr8	77742558	77742574	protein_coding	Rasd2	exon	ENSMUSG00000034472	NonProperStrand	237	chr11	68886975	68887033	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-1.7447
chr8	74446729	74446745	protein_coding	Zfp617	intron	ENSMUSG00000066880	NonProperStrand	208	chr16	23109052	23109093	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-4.8452
chr2	156925162	156925180	protein_coding	Samhd1	exon	ENSMUSG00000027639	ProperStrand	13	chr4	131866180	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-10.8542
chr8	13339493	13339556	protein_coding	Tfdp1	intron	ENSMUSG00000038482	ProperStrand	19	chr16	23111694	23111784	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-13.1538
chr5	136207488	136208373	protein_coding	Por	exon	ENSMUSG00000005514	ProperStrand	42	chr12	17552949	17553025	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	4	-17.5379
chr8	75020030	75020071	protein_coding	Med26	exon	ENSMUSG00000045248	ProperStrand	45	chr12	110874257	110874290	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	1	-10.5571
chr9	43919667	43919716	protein_coding	Rnf26	utr3	ENSMUSG00000053128	ProperStrand	30	chr5	74489564	74489654	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	4	-15.9740
chr9	78326866	78328327	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr17	24857716	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	19	-1.1139
chr5	114858144	114861058	protein_coding	Ube3b	exon	ENSMUSG00000029577	ProperStrand	26	chr14	31953025	31953118	protein_coding	Stab1	exon	ENSMUSG00000042286	NonProperStrand	127	1	-13.5028
chr9	78023113	78023144	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr4	137314557	137314628	protein_coding	Alpl	utr5	ENSMUSG00000028766	ProperStrand	80	18	-19.9743
chr12	17556527	17556552	protein_coding	Odc1	exon	ENSMUSG00000011179	ProperStrand	173	chr11	48613919	48614034	protein_coding	Gnb2l1	utr5	ENSMUSG00000020372	ProperStrand	347	7	-inf
chr11	69483190	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	chr19	12086432	12086495	tRNA	tRNA109-ValTAC	.	1546594	ProperStrand	96	1	-1.6891
chr14	66860733	66860754	protein_coding	Ptk2b	intron	ENSMUSG00000059456	NonProperStrand	5	chr2	32818889	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-10.5887
chr5	34694604	34694637	protein_coding	Rnf4	utr3	ENSMUSG00000029110	ProperStrand	27	chr8	129468746	129468797	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-5.9715
chr13	55425786	55425888	protein_coding	Prelid1	intron	ENSMUSG00000021486	ProperStrand	19	chr16	23110828	23110882	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7016
chr4	135327523	135329683	protein_coding	Myom3	exon	ENSMUSG00000037139	NonProperStrand	62	chr19	8800355	8800406	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-3.4696
chr7	133939606	133939735	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	chr12	58331566	58331582	protein_coding	Mipol1	utr5	ENSMUSG00000047022	ProperStrand	40	1	-9.1551
chr3	142351261	142351279	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr6	92104375	92104391	protein_coding	Nr2c2	exon	ENSMUSG00000005893	ProperStrand	101	1	-6.7600
chr11	55296195	55296334	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	chr7	118219574	118219729	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	7	-1.0084
chr10	77519378	77519422	protein_coding	Dnmt3l	utr5	ENSMUSG00000000730	ProperStrand	37	chr11	99885311	99885327	protein_coding	Krt33b	exon	ENSMUSG00000057723	NonProperStrand	352	1	-10.7433
chr8	87525135	87525237	protein_coding	Hook2	exon	ENSMUSG00000052566	ProperStrand	204	chr7	4691730	4691749	protein_coding	Suv420h2	utr5	ENSMUSG00000059851	NonProperStrand	70	1	-10.5489
chr11	116535961	116535982	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr13	49826826	49826926	protein_coding	Iars	exon	ENSMUSG00000037851	ProperStrand	95	1	-5.0147
chr7	3338997	3339047	protein_coding	Cacng7	exon	ENSMUSG00000069806	ProperStrand	29	chr16	43886794	43886849	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	2	-15.1091
chr13	6647832	6647922	protein_coding	Pfkp	exon	ENSMUSG00000021196	ProperStrand	197	chr14	33005038	33005064	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	4	-7.3212
chr8	11221331	11221347	protein_coding	Col4a1	exon	ENSMUSG00000031502	ProperStrand	64	chr5	145532343	145532393	protein_coding	Trrap	intron	ENSMUSG00000045482	ProperStrand	399	1	-9.3890
chr14	15572350	15572368	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr2	181405343	181405359	protein_coding	Sox18	exon	ENSMUSG00000046470	ProperStrand	96	1	-10.3391
chr2	172957824	172957841	antisense	1300015D01Rik	.	ENSMUSG00000087382	ProperStrand	34	chr8	73419713	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.1854
chr2	162893987	162898395	protein_coding	Mybl2	exon	ENSMUSG00000017861	ProperStrand	230	chr10	23505151	23505209	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-1.4629
chrX	98991252	98991352	protein_coding	8030474K03Rik	exon	ENSMUSG00000046774	ProperStrand	8	chr4	131908689	131908744	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.7736
chr11	62418013	62418035	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr7	51505822	51505909	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	2	-7.2569
chr8	36049950	36050029	SINE	B3	B2	chr8B336049953	NonProperStrand	3	chr19	40439047	40439075	protein_coding	Sorbs1	intron	ENSMUSG00000025006	ProperStrand	25	3	-inf
chr15	96827350	96827440	protein_coding	Slc38a4	utr3	ENSMUSG00000022464	ProperStrand	139	chr11	106362299	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-4.2210
chr4	131908687	131908896	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	chr15	98356776	98356914	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	23	-2.5639
chr4	126704061	126704522	protein_coding	Sfpq	exon	ENSMUSG00000028820	ProperStrand	340	chr2	157221930	157222020	protein_coding	Manbal	utr3	ENSMUSG00000063019	ProperStrand	11	1	-13.3034
chrX	71517834	71517914	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	chr6	71832581	71832671	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	5	-2.9550
chr9	120037953	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	chr3	95980364	95980410	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	4	-1.2211
chr1	170030863	170030953	LINE	Lx8	L1	chr1Lx8170030782	ProperStrand	1	chr1	170030679	170030759	LTR	RLTR1D	ERV1	chr1RLTR1D170030246	ProperStrand	1	1	-inf
chr12	21396651	21396714	protein_coding	Ywhaq	utr3	ENSMUSG00000076432	ProperStrand	70	chr4	131865884	131865974	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.5345
chr19	7107005	7107105	protein_coding	Stip1	exon	ENSMUSG00000024966	ProperStrand	100	chr19	8799021	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-4.8390
chr5	74489238	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr16	38158134	38158214	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	10	-18.9678
chr12	66206302	66206402	protein_coding	Fancm	utr5	ENSMUSG00000055884	ProperStrand	16	chr17	13112511	13112528	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-7.1974
chr7	140179342	140179442	protein_coding	Ctbp2	utr3	ENSMUSG00000030970	ProperStrand	89	chr8	73419657	73419729	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.4395
chr13	52742638	52742728	protein_coding	Syk	utr3	ENSMUSG00000021457	ProperStrand	20	chr12	88778634	88778719	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-8.7045
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr1	162966814	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-1.3207
chr3	30717609	30717699	protein_coding	Sec62	exon	ENSMUSG00000027706	ProperStrand	12	chr4	40894999	40895079	protein_coding	Bag1	utr5	ENSMUSG00000028416	ProperStrand	5	1	-19.3297
chr19	5843866	5843956	non_coding	Neat1	.	ENSMUSG00000092274	ProperStrand	63	chr9	15119287	15119365	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-5.0141
chr19	10702948	10703578	protein_coding	Ddb1	utr3	ENSMUSG00000024740	ProperStrand	304	chrX	34622906	34622942	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-0.7158
chr3	135128166	135128223	protein_coding	Ube2d3	utr3	ENSMUSG00000078578	ProperStrand	34	chr1	162967519	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-7.5767
chr14	79980170	79980186	protein_coding	Elf1	exon	ENSMUSG00000036461	NonProperStrand	17	chr9	120038529	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.4412
chr14	60857448	60858331	protein_coding	Nupl1	exon	ENSMUSG00000063895	ProperStrand	16	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	5	-19.5743
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr8	98270007	98270097	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	2	-1.7159
chr2	165880678	165880757	protein_coding	Ncoa3	exon	ENSMUSG00000027678	ProperStrand	58	chr12	101623877	101623938	protein_coding	Ttc7b	intron	ENSMUSG00000033530	ProperStrand	49	1	-13.7951
chr1	157126793	157126809	protein_coding	Xpr1	utr3	ENSMUSG00000026469	NonProperStrand	4	chr11	6428108	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-8.6824
chr13	46862888	46862978	snoRNA	ENSMUSG00000064558_SNORA55	.	ENSMUSG00000064558	ProperStrand	187	chr6	115758002	115758082	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-3.3193
chr9	64023055	64023465	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	chr2	165177944	165177960	protein_coding	Zfp663	exon	ENSMUSG00000056824	ProperStrand	12	4	-inf
chr11	102340259	102340339	protein_coding	Gpatch8	exon	ENSMUSG00000034621	ProperStrand	49	chr9	120039567	120039657	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.6918
chr9	64022772	64023070	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	chr19	8799601	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-2.4121
chr12	66107336	66107365	protein_coding	Fam179b	exon	ENSMUSG00000035614	ProperStrand	21	chr1	162968460	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	3	-18.5174
chr10	23505069	23505437	protein_coding	Rps12	exon	ENSMUSG00000061983	ProperStrand	309	chr1	88252836	88252879	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-3.4916
chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-2.2019
chr6	22390289	22390308	LTR	MLT1B	MaLR	chr6MLT1B22390284	ProperStrand	1	chrX	120217485	120217504	protein_coding	3110007F17Rik	intron	ENSMUSG00000079450	NonProperStrand	18	1	-inf
chr2	158185530	158185655	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr3	95980284	95980358	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	2	-1.7340
chr2	119292482	119292533	protein_coding	Ino80	intron	ENSMUSG00000034154	ProperStrand	54	chr9	15120949	15121039	snoRNA	ENSMUSG00000065265_SNORA32	.	ENSMUSG00000065265	ProperStrand	101	2	-19.0592
chr9	72464815	72464831	protein_coding	Rfx7	exon	ENSMUSG00000037674	NonProperStrand	3	chr7	116663709	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-14.5479
chr8	113043417	113043434	protein_coding	Hydin	intron	ENSMUSG00000059854	ProperStrand	47	chr14	76247711	76247753	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-4.6383
chr3	120907458	120907476	protein_coding	Tmem56	utr3	ENSMUSG00000028132	ProperStrand	30	chr19	8799833	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-6.3088
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr16	91044767	91044783	protein_coding	Gcfc1	utr5	ENSMUSG00000022974	ProperStrand	17	1	-11.2733
chr2	90235304	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	21034879	21034899	protein_coding	Peli1	intron	ENSMUSG00000020134	NonProperStrand	2	1	-11.8388
chr4	132732419	132732461	protein_coding	Wasf2	exon	ENSMUSG00000028868	ProperStrand	56	chr18	73693122	73693148	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-5.6591
chr2	127366042	127366122	protein_coding-noncoding	Prom2	utr3	ENSMUSG00000027376	ProperStrand	1	chr2	127365896	127365986	protein_coding	Prom2	intron	ENSMUSG00000027376	ProperStrand	2	1	-inf
chrX	20431070	20431160	protein_coding	Araf	exon	ENSMUSG00000001127	ProperStrand	23	chr7	116664841	116664921	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-4.3088
chr11	68804202	68804262	protein_coding	Pfas	exon	ENSMUSG00000020899	ProperStrand	53	chr5	130300531	130300556	protein_coding	Cct6a	intron	ENSMUSG00000029447	ProperStrand	128	1	-12.0416
chr14	33005041	33005139	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	chr1	145626088	145626195	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	2	-1.1765
chr11	113730275	113731050	protein_coding	Sdk2	exon	ENSMUSG00000041592	NonProperStrand	98	chrX	131120710	131122043	protein_coding	Rpl36a	exon	ENSMUSG00000079435	ProperStrand	53	3	-19.4452
chr13	51743568	51743624	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	chr11	62416994	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	6	-5.9614
chr9	45774921	45775011	protein_coding	Pafah1b2	utr3	ENSMUSG00000003131	ProperStrand	6	chr5	130300473	130300553	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-7.0019
chr12	36219400	36219416	protein_coding	Ahr	utr5	ENSMUSG00000019256	NonProperStrand	64	chr11	106362335	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-5.7158
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr6	47248642	47248661	protein_coding	Cntnap2	utr3	ENSMUSG00000039419	ProperStrand	21	1	-10.7160
chr10	61159923	61159985	protein_coding	Tysnd1	intron	ENSMUSG00000020087	ProperStrand	54	chr3	123210907	123210970	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.2397
chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	chr2	118611946	118611962	protein_coding	Disp2	exon	ENSMUSG00000040035	NonProperStrand	204	1	-8.3141
chr19	36720189	36720205	lincRNA	1500017E21Rik	exon	ENSMUSG00000087579	ProperStrand	11	chr19	5845410	5845449	non_coding	Neat1	.	ENSMUSG00000092274	ProperStrand	63	1	-16.6529
chr5	35860196	35860281	protein_coding	Cpz	exon	ENSMUSG00000036596	ProperStrand	5	chr4	131908688	131908740	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.7672
chr12	112543999	112544688	protein_coding	Cdc42bpb	exon	ENSMUSG00000021279	ProperStrand	128	chr16	23110470	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.2814
chr8	127397374	127398173	protein_coding	Gnpat	exon	ENSMUSG00000031985	ProperStrand	20	chr19	8800377	8800457	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-9.2764
chr1	162968442	162968508	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	chr11	115274619	115274650	tRNA	tRNA1234-ArgCCT	.	144680	ProperStrand	2	2	-inf
chr13	67034233	67034323	protein_coding	Ptdss1	utr5	ENSMUSG00000021518	NonProperStrand	2	chr8	32260335	32260425	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	NonProperStrand	14	2	-inf
chr15	88786458	88786475	protein_coding	Mlc1	utr3	ENSMUSG00000035805	ProperStrand	10	chr11	62416951	62417018	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-9.6758
chr19	30145941	30148399	protein_coding	Uhrf2	exon	ENSMUSG00000024817	ProperStrand	40	chr5	144951961	144951979	protein_coding	Bhlha15	exon	ENSMUSG00000052271	ProperStrand	2	1	-inf
chr2	26761319	26761383	protein_coding	Med22	utr3	ENSMUSG00000015776	ProperStrand	2	chr16	35000440	35000458	protein_coding	Mylk	exon	ENSMUSG00000022836	ProperStrand	19	1	-inf
chr8	125591275	125591360	protein_coding	Spg7	intron	ENSMUSG00000000738	ProperStrand	40	chr10	23505187	23505277	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.8310
chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr1	17087852	17087868	protein_coding	Jph1	utr5	ENSMUSG00000042686	ProperStrand	39	1	-7.3115
chr5	74489223	74489323	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr14	12999388	13011790	protein_coding	Ptprg	exon	ENSMUSG00000021745	ProperStrand	72	4	-16.2607
chr12	39592784	39592803	protein_coding	Etv1	utr3	ENSMUSG00000004151	ProperStrand	2	chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	1	-16.9320
chr7	135148242	135148260	protein_coding	Trim72	exon	ENSMUSG00000042828	ProperStrand	24	chr11	106362341	106362359	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-7.6694
chr9	107302369	107302386	protein_coding	Cacna2d2	utr5	ENSMUSG00000010066	NonProperStrand	13	chr16	17262557	17262665	protein_coding	Hic2	utr3	ENSMUSG00000050240	ProperStrand	36	1	-17.3705
chr19	10974850	10975188	protein_coding	Prpf19	exon	ENSMUSG00000024735	ProperStrand	75	chr5	141090405	141090422	protein_coding	Lfng	exon	ENSMUSG00000029570	NonProperStrand	92	1	-12.0062
chr6	90963913	90964013	protein_coding	Nup210	utr3	ENSMUSG00000030091	ProperStrand	140	chr11	97642952	97642978	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.1681
chr10	57938977	57939008	protein_coding	Ranbp2	exon	ENSMUSG00000003226	ProperStrand	52	chr1	162967519	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-3.7393
chr7	150901674	150901690	protein_coding	Osbpl5	utr5	ENSMUSG00000037606	NonProperStrand	7	chr1	162966189	162966269	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-11.9918
chr3	88447940	88447970	protein_coding	Arhgef2	exon	ENSMUSG00000028059	ProperStrand	13	chr7	135148242	135148260	protein_coding	Trim72	exon	ENSMUSG00000042828	ProperStrand	24	1	-18.3408
chr4	107851054	107851071	protein_coding	Echdc2	intron	ENSMUSG00000028601	NonProperStrand	12	chr16	23111416	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-10.0786
chr15	103362791	103362896	protein_coding	Ppp1r1a	exon	ENSMUSG00000022490	ProperStrand	2	chr1	60623855	60623872	protein_coding	Raph1	intron	ENSMUSG00000026014	NonProperStrand	15	2	-inf
chr2	164250648	164250701	protein_coding	Sdc4	utr3	ENSMUSG00000017009	ProperStrand	177	chr2	158205277	158205367	snoRNA	ENSMUSG00000064585_SNORA71	.	ENSMUSG00000064585	ProperStrand	418	1	-7.2677
chr4	116826697	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	chr2	32818868	32818941	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	6	-4.2238
chr17	45706453	45706512	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr2	96806301	96806319	protein_coding	Lrrc4c	intron	ENSMUSG00000050587	NonProperStrand	16	1	-9.3968
chr8	114365730	114365820	protein_coding	Cfdp1	exon	ENSMUSG00000031954	ProperStrand	32	chr11	97643009	97643089	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.5978
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr11	69481333	69481431	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-1.8555
chr1	95681346	95681435	protein_coding	Atg4b	exon	ENSMUSG00000026280	ProperStrand	13	chr17	35089182	35089210	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-8.5579
chr9	108109971	108110071	protein_coding	Dag1	exon	ENSMUSG00000039952	ProperStrand	54	chr16	23111708	23111774	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.0726
chr5	65136119	65136136	LTR	ORR1D2-int	MaLR	chr5ORR1D2-int65135280	ProperStrand	30	chr17	24857639	24857920	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	2	-17.4693
chr5	37667535	37667552	protein_coding	Crmp1	exon	ENSMUSG00000029121	ProperStrand	85	chr7	133938935	133939008	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	1	-7.6451
chr4	43505656	43505724	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr1	20552541	20552558	protein_coding	Pkhd1	exon	ENSMUSG00000043760	NonProperStrand	49	1	-3.4383
chr5	65988425	65988455	protein_coding	Ube2k	utr3	ENSMUSG00000029203	ProperStrand	289	chr14	68314306	68314406	protein_coding	Cdca2	intron	ENSMUSG00000048922	ProperStrand	50	4	-18.8663
chr7	29171540	29171558	protein_coding	Med29	utr3	ENSMUSG00000003444	NonProperStrand	134	chr2	130103438	130103501	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-6.4679
chr18	64737318	64737335	protein_coding	Atp8b1	exon	ENSMUSG00000039529	NonProperStrand	9	chr15	79908957	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-9.3140
chr7	52382235	52382315	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	chr11	116938557	116938647	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	17	-19.9840
chr2	90235306	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	165203163	165203180	protein_coding	Zfp334	utr3	ENSMUSG00000017667	NonProperStrand	33	3	-13.1191
chr14	31995429	31995523	protein_coding	Nisch	intron	ENSMUSG00000021910	ProperStrand	125	chr9	63868723	63868739	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	1	-7.1242
chr2	126455086	126455112	protein_coding	Gabpb1	utr3	ENSMUSG00000027361	ProperStrand	54	chr18	35716812	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-8.6343
chr14	121310510	121340084	protein_coding	Ipo5	exon	ENSMUSG00000030662	ProperStrand	135	chr9	15119292	15119398	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	3	-8.8302
chr13	28653437	28700391	lincRNA	2610307P16Rik	exon	ENSMUSG00000085936	ProperStrand	154	chr6	120838289	120838311	protein_coding	Bcl2l13	utr3	ENSMUSG00000009112	ProperStrand	18	1	-13.8665
chr2	179918133	179918338	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr8	3606343	3606530	protein_coding	Camsap3	exon	ENSMUSG00000044433	ProperStrand	86	4	-inf
chr8	109474111	109474183	protein_coding	Sntb2	intron	ENSMUSG00000041308	ProperStrand	41	chr9	120039658	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-4.0263
chr5	115939528	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr17	24856620	24856665	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	3	-4.3419
chr12	88778629	88778732	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	chr5	74489564	74489677	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	7	-0.8805
chr13	29830307	29830343	protein_coding	Cdkal1	intron	ENSMUSG00000006191	ProperStrand	43	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-8.8477
chr10	80642356	80645101	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr11	55296225	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	2	-0.7960
chr11	23396720	23396790	protein_coding	Ahsa2	exon	ENSMUSG00000020288	ProperStrand	1	chr10	110918595	110918685	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-inf
chr11	6428088	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr5	101260409	101260436	snoRNA	ENSMUSG00000077354_SNORA42	.	ENSMUSG00000077354	ProperStrand	22	1	-5.0956
chr11	78033550	78034680	protein_coding	Supt6h	exon	ENSMUSG00000002052	ProperStrand	119	chr4	41160815	41160877	protein_coding	Ubap2	utr5	ENSMUSG00000028433	ProperStrand	292	2	-13.9134
chr7	52684088	52684838	protein_coding	Ruvbl2	exon	ENSMUSG00000003868	ProperStrand	41	chr10	93428938	93428956	protein_coding	Vezt	utr3	ENSMUSG00000036099	NonProperStrand	4	1	-21.8874
chr4	131908302	131908409	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	chr16	18240811	18240937	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	14	-4.5103
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr2	181405343	181405359	protein_coding	Sox18	exon	ENSMUSG00000046470	ProperStrand	96	1	-12.2082
chr13	49824113	49825396	protein_coding	Iars	exon	ENSMUSG00000037851	ProperStrand	95	chr5	108332147	108332199	protein_coding	Rpl5	intron	ENSMUSG00000058558	ProperStrand	235	1	-9.6533
chrX	160578574	160578590	protein_coding	Ace2	utr5	ENSMUSG00000015405	ProperStrand	3	chr19	8798484	8798523	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-11.5227
chr2	105229189	105229244	protein_coding	Rcn1	exon	ENSMUSG00000005973	ProperStrand	24	chr5	121655017	121655107	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-9.0624
chr7	133635793	133641796	protein_coding	Atxn2l	exon	ENSMUSG00000032637	ProperStrand	219	chr16	23110924	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	17	-5.4331
chr7	87180430	87180466	protein_coding	Zfp710	intron	ENSMUSG00000048897	ProperStrand	229	chr2	26494708	26494792	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	3	-3.2000
chr17	66855422	66868766	protein_coding	Rab12	exon	ENSMUSG00000023460	ProperStrand	12	chr18	35714146	35714258	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-10.7536
chr15	8103174	8103226	protein_coding	Nup155	exon	ENSMUSG00000022142	ProperStrand	91	chrX	113862540	113862569	snoRNA	ENSMUSG00000088518_SNORA9	.	ENSMUSG00000088518	ProperStrand	280	1	-9.3899
chr15	82971462	82971479	protein_coding	Poldip3	intron	ENSMUSG00000041815	ProperStrand	57	chr7	116664870	116664913	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.6374
chr14	72301755	72301771	SINE	B4	B4	chr14B472301692	NonProperStrand	99	chr9	114470888	114470953	protein_coding	Trim71	intron	ENSMUSG00000079259	ProperStrand	162	1	-10.3143
chr11	116535503	116535531	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr12	112559182	112559282	protein_coding	Cdc42bpb	exon	ENSMUSG00000021279	ProperStrand	128	1	-4.4433
chr13	44964961	44965081	protein_coding	Jarid2	intron	ENSMUSG00000038518	ProperStrand	372	chr7	89832344	89832838	protein_coding	Eftud1	exon	ENSMUSG00000038563	ProperStrand	12	1	-12.9410
chr14	73877399	73877423	SINE	B1_Mur4	Alu	chr14B1_Mur473877402	ProperStrand	1	chr10	23505152	23505204	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-inf
mmu-miR-6240	1	25	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr1	9932550	9932624	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	2	-2.0318
chr2	164251433	164251533	protein_coding	Sdc4	utr3	ENSMUSG00000017009	ProperStrand	177	chr15	79913288	79913334	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-1.7375
chr2	157942863	157959995	protein_coding	Tgm2	utr3	ENSMUSG00000037820	ProperStrand	44	chr16	23110829	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-6.2249
chr11	120565414	120570250	protein_coding	Aspscr1	exon	ENSMUSG00000025142	ProperStrand	53	chr2	158182156	158182200	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	3	-12.2991
chr7	52098083	52098208	protein_coding	Tbc1d17	exon	ENSMUSG00000038520	ProperStrand	20	chr19	8963052	8963122	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.2716
chr8	79734308	79734331	protein_coding	Nr3c2	intron	ENSMUSG00000031618	NonProperStrand	8	chr11	69483136	69483191	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-6.3191
mmu-miR-3968	3	20	miRNA	mmu-miR-3968	.	mmu-miR-3968	ProperStrand	27	chr16	23111703	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.2801
chr13	84420969	84421059	protein_coding	Tmem161b	intron	ENSMUSG00000035762	ProperStrand	22	chr7	116664809	116664889	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-4.3947
chr17	56553390	56553418	protein_coding	Ptprs	exon	ENSMUSG00000013236	ProperStrand	152	chrX	165695583	165695599	protein_coding	Arhgap6	exon	ENSMUSG00000031355	ProperStrand	74	1	-11.0260
chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	chr10	30530946	30531020	tRNA	tRNA81-GluCTC	.	1080827	ProperStrand	154	1	-9.5442
chr8	113495722	113495738	protein_coding	St3gal2	utr3	ENSMUSG00000031749	NonProperStrand	9	chr19	8963026	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.8692
chr8	9632816	9632836	protein_coding	Fam155a	intron	ENSMUSG00000079157	ProperStrand	15	chr17	24857717	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	8	-20.0254
chr10	19987149	19989184	protein_coding	Mtap7	exon	ENSMUSG00000019996	ProperStrand	43	chr5	99443584	99443601	protein_coding	Prkg2	intron	ENSMUSG00000029334	NonProperStrand	57	1	-14.0886
chr5	108333789	108333827	protein_coding	Rpl5	exon	ENSMUSG00000058558	ProperStrand	235	chr4	122968660	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	2	-6.1865
chr2	158451026	158451043	protein_coding	Actr5	exon	ENSMUSG00000037761	NonProperStrand	94	chr19	8800420	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-2.7236
chr4	133574127	133574143	protein_coding	Lin28a	exon	ENSMUSG00000050966	ProperStrand	55	chr19	8963116	8963174	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.4215
chr2	164251395	164251426	protein_coding	Sdc4	utr3	ENSMUSG00000017009	ProperStrand	177	chr1	162966007	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-3.2043
chr5	115940351	115940407	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	chr17	35088957	35088998	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	2	-3.1569
chr5	121655017	121655107	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	chr5	147646405	147646441	snoRNA	ENSMUSG00000077185_SNORD102	.	ENSMUSG00000077185	ProperStrand	142	4	-8.2159
chr14	78901999	78902773	protein_coding	Akap11	exon	ENSMUSG00000022016	ProperStrand	44	chr16	23111389	23111479	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-6.8847
chr7	79317420	79317510	protein_coding	Mctp2	intron	ENSMUSG00000032776	NonProperStrand	1	chr7	79326130	79326210	protein_coding	Mctp2	intron	ENSMUSG00000032776	ProperStrand	9	1	-inf
chr11	33313637	33313690	protein_coding	Ranbp17	intron	ENSMUSG00000040594	ProperStrand	20	chr10	110918580	110918670	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	4	-17.3490
chr5	74489268	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	1	-1.0091
chr12	110881069	110881114	lincRNA	Rian	intron	ENSMUSG00000091793	ProperStrand	612	chr15	102329793	102329893	protein_coding	Pcbp2	utr3	ENSMUSG00000056851	ProperStrand	164	6	-24.4480
chr16	23111803	23111833	protein_coding	Eif4a2	intron	ENSMUSG00000022884	ProperStrand	356	chr11	62416951	62417009	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-2.6969
chr16	32682985	32683013	protein_coding	Tnk2	utr3	ENSMUSG00000022791	ProperStrand	86	chr9	78328090	78328185	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	2	-9.1885
chr12	4249870	4253682	protein_coding	Ncoa1	exon	ENSMUSG00000020647	ProperStrand	38	chr18	10067530	10067546	protein_coding	Rock1	exon	ENSMUSG00000024290	NonProperStrand	22	1	-16.2903
chr3	154150501	154150517	LINE	L1_Rod	L1	chr3L1_Rod154150467	NonProperStrand	7	chr5	74489215	74489249	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	1	-10.0042
chr11	4077565	4077617	protein_coding	Sf3a1	exon	ENSMUSG00000002129	ProperStrand	78	chr9	62992379	62992395	protein_coding	Skor1	exon	ENSMUSG00000022245	NonProperStrand	70	1	-12.4775
chr17	32349880	32358431	protein_coding	Brd4	exon	ENSMUSG00000024002	ProperStrand	121	chr11	97642952	97643025	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	5	-7.6537
chr15	96415989	96417295	protein_coding	Slc38a1	exon	ENSMUSG00000023169	ProperStrand	69	chr11	69483136	69483192	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.2149
chr17	24665407	24665435	antisense	2610019E17Rik	.	ENSMUSG00000093565	ProperStrand	24	chr8	3803252	3803342	misc_RNA	RNaseP_nuc	.	ENSMUSG00000088025	ProperStrand	328	1	-11.7638
chr8	87824698	87824788	protein_coding	Orc6	intron	ENSMUSG00000031697	ProperStrand	23	chr15	34370588	34370668	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-5.3878
chr10	5634068	5634084	protein_coding	Esr1	exon	ENSMUSG00000019768	NonProperStrand	24	chr2	22444780	22444812	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-9.6231
chr3	157674743	157675119	protein_coding	Srsf11	utr3	ENSMUSG00000055436	ProperStrand	46	chr9	120037994	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	2	-8.5891
chr5	74489201	74489317	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr9	70306951	70317168	protein_coding	Rnf111	exon	ENSMUSG00000032217	NonProperStrand	13	2	-13.9228
chr11	59011444	59011524	LTR	MTA_Mm	MaLR	chr11MTA_Mm59011363	NonProperStrand	1	chr7	82001527	82001617	LTR	MTA_Mm	MaLR	chr7MTA_Mm82001211	NonProperStrand	1	1	-inf
chr15	22578450	22578467	protein_coding	Cdh18	intron	ENSMUSG00000040420	NonProperStrand	26	chr5	74489621	74489670	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-5.3862
chr6	143116353	143116443	protein_coding	Etnk1	intron	ENSMUSG00000030275	ProperStrand	61	chr4	131866155	131866235	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-3.6345
chr11	88797247	88802621	protein_coding	Scpep1	exon	ENSMUSG00000000278	ProperStrand	54	chr11	6428038	6428128	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	5	-14.5524
chr1	53409486	53409502	protein_coding	Asnsd1	utr5	ENSMUSG00000026095	NonProperStrand	105	chr3	88715214	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-6.1270
chr17	56847307	56847344	protein_coding	Ranbp3	exon	ENSMUSG00000002372	ProperStrand	34	chr13	49779667	49779745	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-8.1500
chrX	7342684	7343685	protein_coding	Tfe3	exon	ENSMUSG00000000134	ProperStrand	10	chr8	116260626	116260643	protein_coding	Adamts18	exon	ENSMUSG00000053399	NonProperStrand	3	1	-inf
chr18	73693109	73693192	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr4	131908686	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	54	-0.7352
chr5	115236061	115236762	protein_coding	Ankrd13a	exon	ENSMUSG00000041870	ProperStrand	22	chr8	73419664	73419789	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-11.9783
chr1	95690853	95690870	protein_coding	Dtymk	intron	ENSMUSG00000026281	ProperStrand	34	chr1	162967491	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	4	-14.5125
chr11	116535914	116535982	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr2	130103751	130103797	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-1.5537
chr11	99885311	99885327	protein_coding	Krt33b	exon	ENSMUSG00000057723	NonProperStrand	352	chr9	15118322	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-0.7338
chr3	74559877	74559894	LINE	Lx3_Mus	L1	chr3Lx3_Mus74559728	NonProperStrand	1	chr19	6374141	6374188	protein_coding	Sf1	exon	ENSMUSG00000024949	ProperStrand	251	1	-inf
chr11	6520256	6520299	protein_coding-noncoding	Tbrg4	utr3	ENSMUSG00000000384	ProperStrand	7	chr12	110874223	110874290	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	1	-14.4010
chr7	73044038	73044054	protein_coding	Pcsk6	intron	ENSMUSG00000030513	NonProperStrand	9	chr8	28089309	28089325	protein_coding	Zfp703	utr3	ENSMUSG00000085795	ProperStrand	1	1	-inf
chr5	75473198	75473215	protein_coding	Gsx2	utr3	ENSMUSG00000035946	ProperStrand	307	chr18	35403667	35403712	protein_coding	Ctnna1	exon	ENSMUSG00000037815	ProperStrand	115	1	-8.7382
chr8	26933673	26933703	protein_coding	Ash2l	exon	ENSMUSG00000031575	ProperStrand	113	chr5	108334196	108334286	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	5	-15.1932
chr11	74633384	74633400	protein_coding	Mettl16	utr3	ENSMUSG00000010554	NonProperStrand	15	chr12	85350481	85350499	protein_coding	Acot1	utr5	ENSMUSG00000072949	ProperStrand	72	1	-15.7933
chr11	97642952	97643078	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	chr7	106631316	106631442	snoRNA	ENSMUSG00000065822_Snord15a	.	ENSMUSG00000065822	ProperStrand	128	2	-2.4628
chr8	90653613	90653645	protein_coding	Tmem188	exon	ENSMUSG00000036810	ProperStrand	14	chr7	116663634	116663724	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	5	-inf
chr17	68083087	68083103	protein_coding	Lama1	intron	ENSMUSG00000032796	NonProperStrand	26	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-8.8831
chr7	116663641	116663768	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	chr7	16524110	16524219	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	4	-1.8479
chr11	22759712	22759729	protein_coding	B3gnt2	utr5	ENSMUSG00000051650	ProperStrand	2	chr11	62416951	62416992	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-13.4790
chr19	44188467	44188547	snoRNA	ENSMUSG00000077391_SNORA12	.	ENSMUSG00000077391	ProperStrand	506	chr5	108336363	108336410	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-2.3245
chrX	160837861	160837884	protein_coding	Figf	intron	ENSMUSG00000031380	ProperStrand	5	chr7	116664803	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	4	-21.3562
chr3	88549785	88549841	protein_coding	Syt11	utr3	ENSMUSG00000068923	ProperStrand	7	chrX	34622927	34623017	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-7.4170
chr6	86321578	86326520	protein_coding	Snrpg	exon	ENSMUSG00000057278	ProperStrand	12	chr16	23111373	23111505	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	8	-21.6308
chr7	52023901	52024948	protein_coding	Vrk3	exon	ENSMUSG00000002205	ProperStrand	22	chr4	131908275	131908378	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	8	-19.8260
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr2	24825186	24827046	protein_coding	Wdr85	exon	ENSMUSG00000026975	ProperStrand	323	2	-4.7708
chr3	96365357	96365401	protein_coding	Txnip	utr3	ENSMUSG00000038393	ProperStrand	172	chr19	8798772	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-2.8483
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr16	33625246	33646649	protein_coding	Slc12a8	exon	ENSMUSG00000035506	ProperStrand	52	1	-7.2093
chr16	5062715	5063040	protein_coding	Ubn1	exon	ENSMUSG00000039473	ProperStrand	35	chr7	51097699	51097717	protein_coding	Klk5	exon	ENSMUSG00000074155	ProperStrand	29	1	-15.9113
chr2	158184092	158184191	snoRNA	ENSMUSG00000064995_SNORA71	.	ENSMUSG00000064995	ProperStrand	430	chr7	116663634	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-0.8261
chr18	36754579	36754596	protein_coding	Ankhd1	utr5	ENSMUSG00000024483	ProperStrand	56	chr18	35714144	35714258	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	NonProperStrand	47	1	-13.9490
chr4	155197889	155197991	protein_coding	Ccnl2	utr3	ENSMUSG00000029068	ProperStrand	19	chr10	127677703	127678341	protein_coding	Timeless	exon	ENSMUSG00000039994	ProperStrand	53	3	-20.3891
chr12	87865704	87865722	SINE	RSINE1	B4	chr12RSINE187865630	ProperStrand	36	chr16	23110454	23110529	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.3689
chr4	132530097	132530117	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	chr10	80251593	80251693	protein_coding	Dot1l	exon	ENSMUSG00000061589	ProperStrand	48	1	-10.0492
chrX	49782261	49782297	protein_coding	Gpc3	exon	ENSMUSG00000055653	ProperStrand	43	chr12	60774072	60774112	snoRNA	ENSMUSG00000077603_SNORA3	.	ENSMUSG00000077603	ProperStrand	185	2	-18.3280
chr5	77764697	77764775	protein_coding	Polr2b	exon	ENSMUSG00000029250	ProperStrand	68	chr6	108733352	108763671	protein_coding	Arl8b	exon	ENSMUSG00000030105	ProperStrand	28	6	-19.1403
chr9	78327834	78327924	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr10	23505547	23505627	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-1.2043
chr7	108912149	108921619	protein_coding	Clpb	exon	ENSMUSG00000001829	NonProperStrand	3	chr10	127556866	127556928	protein_coding	Baz2a	exon	ENSMUSG00000040054	NonProperStrand	9	1	-inf
chr19	10698048	10699223	protein_coding	Ddb1	exon	ENSMUSG00000024740	ProperStrand	304	chr19	8800385	8800469	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	9	-13.4637
chr15	78994730	78994746	protein_coding	Sox10	utr5	ENSMUSG00000033006	NonProperStrand	8	chr13	76341035	76341055	protein_coding	Fam81b	intron	ENSMUSG00000078966	NonProperStrand	220	1	-14.8411
chr18	35770537	35770593	protein_coding	Paip2	utr5	ENSMUSG00000037058	ProperStrand	15	chr9	15119286	15119376	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-7.8763
chr6	6059222	6059295	protein_coding	Slc25a13	exon	ENSMUSG00000015112	ProperStrand	78	chr7	116664793	116664883	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.1086
chr11	102265004	102265171	protein_coding	Slc25a39	exon	ENSMUSG00000018677	ProperStrand	35	chr7	116664809	116664889	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.5143
chr13	73934225	73934265	protein_coding	Slc12a7	utr3	ENSMUSG00000017756	ProperStrand	80	chr15	34370545	34370596	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-3.0266
chr5	42136455	42136473	Low_complexity	GA-rich	Low_complexity	chr5GA-rich42136449	NonProperStrand	106	chr14	31827478	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-5.8220
chr11	70042026	70042078	protein_coding	Bcl6b	exon	ENSMUSG00000000317	ProperStrand	2	chr4	14703975	14703992	protein_coding	Lrrc69	intron	ENSMUSG00000023151	ProperStrand	4	1	-inf
chr10	62421657	62421713	protein_coding	Dna2	exon	ENSMUSG00000036875	ProperStrand	35	chr9	120038579	120038669	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.0343
chr2	157709912	157710002	protein_coding	Ctnnbl1	exon	ENSMUSG00000027649	ProperStrand	26	chr1	162967490	162967550	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-5.0673
chr15	35861794	35865097	protein_coding	Cox6c	utr3	ENSMUSG00000014313	ProperStrand	10	chr6	80575888	80575907	protein_coding	Lrrtm4	intron	ENSMUSG00000052581	NonProperStrand	9	2	-20.5112
chr8	69228390	69228406	protein_coding	Npy1r	exon	ENSMUSG00000036437	ProperStrand	13	chr11	96679189	96679238	protein_coding	Nfe2l1	utr3	ENSMUSG00000038615	ProperStrand	118	1	-15.0799
chr8	44389864	44392207	protein_coding	Zfp42	utr5	ENSMUSG00000051176	ProperStrand	127	chr11	62416623	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-3.7397
chr3	107471006	107471045	protein_coding	Ahcyl1	exon	ENSMUSG00000027893	ProperStrand	81	chr5	136673671	136673687	protein_coding	Prkrip1	exon	ENSMUSG00000039737	NonProperStrand	30	1	-14.1172
chr11	96960442	96960459	protein_coding	Tbx21	exon	ENSMUSG00000001444	NonProperStrand	1	chr4	131908299	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-inf
chr13	91064180	91064265	protein_coding	Rps23	exon	ENSMUSG00000049517	ProperStrand	34	chr3	123210877	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	7	-18.8919
chr11	94511380	94511470	protein_coding-noncoding	Eme1	utr3	ENSMUSG00000039055	NonProperStrand	1	chr11	94511187	94511267	protein_coding	Eme1	intron	ENSMUSG00000039055	NonProperStrand	1	1	-inf
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr6	83111671	83111687	protein_coding	1700003E16Rik	exon	ENSMUSG00000030030	ProperStrand	352	1	-2.5933
chr11	97027389	97028868	protein_coding	Kpnb1	exon	ENSMUSG00000001440	ProperStrand	197	chr6	129628834	129628851	protein_coding	Klrc1	exon	ENSMUSG00000030167	NonProperStrand	49	1	-11.3370
chr7	30097871	30097890	protein_coding	Dpf1	exon	ENSMUSG00000030584	ProperStrand	7	chr4	131908236	131908336	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-13.1071
chr11	94015141	94015199	lincRNA	B230206L02Rik	intron	ENSMUSG00000086003	ProperStrand	13	chr7	28057452	28057482	protein_coding	Numbl	intron	ENSMUSG00000063160	NonProperStrand	9	1	-19.9343
chr10	24628523	24628539	protein_coding	Med23	exon	ENSMUSG00000019984	NonProperStrand	3	chrX	84483698	84483750	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-14.6302
chr4	97747466	97747486	protein_coding	Nfia	intron	ENSMUSG00000028565	NonProperStrand	74	chr2	5878668	5878724	protein_coding	Upf2	exon	ENSMUSG00000043241	ProperStrand	21	1	-15.0192
chr4	151730301	151730737	protein_coding	Chd5	exon	ENSMUSG00000005045	NonProperStrand	147	chr7	52382236	52382301	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-6.5033
chr10	80641694	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	chr3	94894545	94894593	snoRNA	ENSMUSG00000064952_SNORD62	.	ENSMUSG00000064952	ProperStrand	75	4	-19.9027
chr11	35603143	35603166	protein_coding	Pank3	utr3	ENSMUSG00000018846	ProperStrand	5	chr17	13112511	13112532	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-9.6638
chr1	71686966	71687013	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr16	43886850	43886929	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	4	-9.7934
chr16	38887912	38887928	LTR	LTR16E2	ERVL	chr16LTR16E238887600	NonProperStrand	6	mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	1	-10.6284
chr9	15130904	15131005	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	chr7	16534823	16534839	protein_coding	Ehd2	utr3	ENSMUSG00000074364	NonProperStrand	197	3	-15.4765
chr11	106697495	106700534	protein_coding	Smurf2	exon	ENSMUSG00000018363	ProperStrand	79	chr1	162965994	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-5.3413
chr5	149100499	149100516	protein_coding	Mtus2	exon	ENSMUSG00000029651	ProperStrand	114	chr7	118219592	118219613	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-2.9893
chr13	62944660	62944677	protein_coding	Fbp2	intron	ENSMUSG00000021456	ProperStrand	100	chr9	120039534	120039564	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.4187
chr1	33820514	33820592	protein_coding	Zfp451	intron	ENSMUSG00000042197	ProperStrand	17	chr9	15118349	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-9.6810
chr14	70709735	70709913	protein_coding	Slc39a14	exon	ENSMUSG00000022094	ProperStrand	17	chr7	108080158	108080228	protein_coding	Arhgef17	exon	ENSMUSG00000032875	ProperStrand	33	1	-17.0200
chr19	60837676	60837716	protein_coding	Eif3a	utr3	ENSMUSG00000024991	ProperStrand	287	chr1	88247743	88247860	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	5	-10.6442
chr4	46182920	46182940	protein_coding	Ncbp1	exon	ENSMUSG00000028330	ProperStrand	21	chr17	35087894	35087965	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	3	-16.5849
chr4	129407541	129419046	protein_coding	Khdrbs1	exon	ENSMUSG00000028790	ProperStrand	22	chr19	8798742	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	2	-10.9825
chr11	98025189	98025206	protein_coding	Med1	exon	ENSMUSG00000018160	NonProperStrand	13	chr5	111121066	111121192	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	3	-20.0093
chr11	105001844	105001860	SINE	B1_Mm	Alu	chr11B1_Mm105001833	NonProperStrand	2	chr8	73419665	73419776	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-10.3981
chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	chr1	162966812	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-3.3639
chr2	164828235	164828344	protein_coding	Ncoa5	exon	ENSMUSG00000039804	ProperStrand	3	chr2	130102021	130102052	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-11.6725
chr11	102416321	102416338	protein_coding	Gpatch8	intron	ENSMUSG00000034621	NonProperStrand	17	chr4	116827120	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-9.5860
chr2	48760556	48760572	protein_coding	Orc4	utr3	ENSMUSG00000026761	ProperStrand	95	chr11	117146814	117146835	protein_coding	Sept9	intron	ENSMUSG00000059248	NonProperStrand	8	1	-16.4704
chr6	70794803	70794820	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chr5	130295417	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	3	-8.6006
chr15	100090656	100090701	protein_coding	Atf1	utr3	ENSMUSG00000023027	ProperStrand	19	chr2	26493424	26493449	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-5.9729
chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	chr9	65127126	65127142	protein_coding	Cilp	exon	ENSMUSG00000042254	ProperStrand	212	1	-10.0353
chr11	78100816	78100842	protein_coding	2610507B11Rik	exon	ENSMUSG00000010277	ProperStrand	246	chr8	32260371	32260423	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	2	-3.7512
chr4	137078072	137078437	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	chr11	87240292	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	1	-5.8132
chr1	137345619	137346480	protein_coding	Nav1	exon	ENSMUSG00000009418	NonProperStrand	60	chr2	130103432	130103502	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-8.0633
chr2	98507240	98507330	protein_coding	Gm10800	exon	ENSMUSG00000075014	NonProperStrand	12	chr2	98502541	98502621	protein_coding	Gm10801	exon	ENSMUSG00000075015	NonProperStrand	4	1	-20.4237
chr1	173341933	173341949	protein_coding	Usf1	utr5	ENSMUSG00000026641	NonProperStrand	144	chr11	97642716	97642755	protein_coding	Rpl23	exon	ENSMUSG00000071415	ProperStrand	920	1	-6.1222
chr12	64708524	64708541	LINE	Lx7	L1	chr12Lx764708466	ProperStrand	2	chr5	74489593	74489667	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-11.1084
chr6	90971408	90971446	protein_coding	Nup210	exon	ENSMUSG00000030091	ProperStrand	140	chr15	50623097	50623161	protein_coding	Trps1	intron	ENSMUSG00000038679	ProperStrand	14	4	-inf
chr13	46862944	46863024	snoRNA	ENSMUSG00000064558_SNORA55	.	ENSMUSG00000064558	ProperStrand	187	chr11	69481335	69481425	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-1.3407
chr1	166367675	166367706	protein_coding	Atp1b1	utr3	ENSMUSG00000026576	ProperStrand	67	chr14	33005140	33005236	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-3.7869
chr19	47394897	47394949	protein_coding	Sh3pxd2a	intron	ENSMUSG00000053617	ProperStrand	57	chr14	76245242	76245426	protein_coding	Tpt1	exon	ENSMUSG00000060126	ProperStrand	236	1	-10.6704
chr7	128200835	128200883	protein_coding	Mettl9	exon	ENSMUSG00000030876	ProperStrand	20	chr7	29136602	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-10.6606
chr19	30191035	30193142	protein_coding	Gldc	exon	ENSMUSG00000024827	ProperStrand	175	chr9	15118336	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-1.6506
chr7	112532935	112533035	protein_coding	Fam160a2	exon	ENSMUSG00000044465	ProperStrand	85	chr1	162967499	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-2.8469
chr16	91659318	91659418	protein_coding	Son	exon	ENSMUSG00000022961	ProperStrand	59	chr9	70422414	70422483	protein_coding	Sltm	intron	ENSMUSG00000032212	ProperStrand	13	1	-16.4322
chrX	147974271	147974300	snoRNA	ENSMUSG00000064665_SNORA4	.	ENSMUSG00000064665	ProperStrand	1	chr16	23111702	23111753	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-inf
chr11	106019681	106019771	protein_coding	Limd2	utr3	ENSMUSG00000040699	ProperStrand	8	chr3	123210891	123210971	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.8655
chr7	117386908	117425205	protein_coding	Swap70	exon	ENSMUSG00000031015	ProperStrand	47	chr16	23110909	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	14	-21.3601
chr5	57062481	57062571	LINE	Lx8	L1	chr5Lx857062308	NonProperStrand	1	chr5	57062638	57062728	LTR	MERVK26-int	ERVK	chr5MERVK26-int57062596	ProperStrand	1	1	-inf
chr5	130295713	130295766	protein_coding	Cct6a	exon	ENSMUSG00000029447	ProperStrand	128	chr10	110918674	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-3.8130
chr13	9636396	9636413	protein_coding	Dip2c	exon	ENSMUSG00000048264	NonProperStrand	51	chr3	123210907	123210972	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.3354
chrX	71486591	71486624	protein_coding	Flna	exon	ENSMUSG00000031328	ProperStrand	134	chr16	56035887	56035990	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	2	-11.7703
chr9	81949793	81949813	protein_coding	Mei4	intron	ENSMUSG00000043289	NonProperStrand	42	chr11	97642952	97643087	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	4	-10.7062
chr2	121265006	121265036	protein_coding	Ell3	utr3	ENSMUSG00000027246	ProperStrand	14	chr9	59519796	59523418	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	5	-inf
chr1	46078109	46078129	protein_coding	Gm4776	utr3	ENSMUSG00000044457	NonProperStrand	24	chr7	29136525	29136615	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.0229
chr4	131908840	131908874	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	chr17	35384119	35384200	snoRNA	ENSMUSG00000065273_SNORD83	.	ENSMUSG00000065273	ProperStrand	244	4	-0.8019
chr5	117092038	117092054	LTR	ORR1B1	MaLR	chr5ORR1B1117091781	NonProperStrand	12	chr16	23111384	23111418	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.0123
chr2	90235293	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	98878340	98878467	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	9	-2.9425
chr9	120037898	120037984	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	chr9	15119322	15119412	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	9	-0.9384
chr11	87240256	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	chr7	116663647	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-2.7320
chr5	135857995	135858011	protein_coding	Pom121	exon	ENSMUSG00000053293	NonProperStrand	94	chr14	33005038	33005092	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-3.1661
chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr17	35087894	35087964	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	8	-9.6700
chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	chr18	38797504	38797593	protein_coding	Arhgap26	intron	ENSMUSG00000036452	ProperStrand	46	1	-11.0118
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr2	130103751	130103806	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-3.2979
chr2	4920758	4920797	protein_coding	Mcm10	exon	ENSMUSG00000026669	ProperStrand	21	chr18	35716789	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-6.8619
chr1	136645404	136645421	protein_coding	Syt2	utr3	ENSMUSG00000026452	NonProperStrand	13	chr15	79908955	79908984	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-8.5451
chr7	148445693	148445721	protein_coding	Phrf1	exon	ENSMUSG00000038611	ProperStrand	86	chr9	44143674	44143788	protein_coding	H2afx	utr3	ENSMUSG00000049932	ProperStrand	137	1	-10.9323
chr1	88423323	88426316	protein_coding	Ptma	exon	ENSMUSG00000026238	ProperStrand	385	chr11	69481338	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	8	-8.2451
chr5	135333915	135334005	SINE	B4	B4	chr5B4135333913	ProperStrand	1	chr5	135333742	135333832	SINE	RSINE1	B4	chr5RSINE1135333766	ProperStrand	1	1	-inf
chr15	3971562	3971578	LTR	ORR1D2-int	MaLR	chr15ORR1D2-int3971558	ProperStrand	1	chr4	43505656	43505719	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	1	-inf
chr2	51965655	51965679	protein_coding	Rif1	exon	ENSMUSG00000036202	ProperStrand	201	chr14	77424372	77424388	protein_coding	9030625A04Rik	utr3	ENSMUSG00000044350	NonProperStrand	152	1	-9.0254
chr7	152049104	152049124	protein_coding	Fgf4	utr3	ENSMUSG00000050917	ProperStrand	66	chr15	37393418	37393437	protein_coding	Ncald	intron	ENSMUSG00000051359	ProperStrand	28	1	-14.6630
chr6	117338846	117338926	LINE	L1Md_F2	L1	chr6L1Md_F2117337963	ProperStrand	1	chr14	34780691	34780781	protein_coding	Zfp488	utr3	ENSMUSG00000044519	NonProperStrand	39	1	-inf
chr4	43505771	43505874	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr8	73287632	73288931	protein_coding	Ifi30	exon	ENSMUSG00000031838	ProperStrand	40	2	-6.4562
chr15	75902100	75902198	protein_coding	Puf60	intron	ENSMUSG00000002524	ProperStrand	18	chr10	30530964	30531020	tRNA	tRNA81-GluCTC	.	165679	ProperStrand	154	1	-13.8684
chr10	6450631	6450649	protein_coding	Plekhg1	intron	ENSMUSG00000040624	NonProperStrand	75	chr15	5068407	5068429	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-5.6289
chr9	57379597	57380114	protein_coding	Cox5a	utr3	ENSMUSG00000000088	ProperStrand	26	chr1	162965547	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.8576
chr16	57391761	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chrX	12721469	12721578	protein_coding	Usp9x	exon	ENSMUSG00000031010	ProperStrand	174	1	-5.6894
chr2	164651115	164651154	protein_coding	Zswim1	exon	ENSMUSG00000017764	ProperStrand	68	chr4	131908689	131908802	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.0584
chr15	79585216	79585232	lincRNA	Gm16576	exon	ENSMUSG00000087543	NonProperStrand	55	chr15	34370552	34370584	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-3.7104
chr9	20696453	20696474	protein_coding	Ppan	exon	ENSMUSG00000004100	ProperStrand	65	chr2	26494778	26494840	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-5.1318
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr5	75473198	75473215	protein_coding	Gsx2	utr3	ENSMUSG00000035946	ProperStrand	307	1	-5.4873
chr15	78982035	78982051	protein_coding	Polr2f	exon	ENSMUSG00000033020	NonProperStrand	71	chr11	106362638	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-7.0695
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr9	81775136	81775153	protein_coding	Mei4	intron	ENSMUSG00000043289	ProperStrand	2	1	-19.0431
chr10	126742631	126742826	protein_coding	Mars	exon	ENSMUSG00000040354	ProperStrand	38	chr15	98350174	98350264	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	3	-13.1564
chr5	112758435	112758451	protein_coding	Tfip11	exon	ENSMUSG00000029345	ProperStrand	111	chr11	62416600	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-3.9907
chr5	130473677	130473760	protein_coding	Gusb	exon	ENSMUSG00000025534	ProperStrand	16	chr4	116826700	116826764	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	10	-inf
chr5	136239314	136239374	protein_coding	Styxl1	intron	ENSMUSG00000019178	ProperStrand	14	chr7	52382755	52382826	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-9.6945
chr3	100765628	100765728	protein_coding	Ttf2	exon	ENSMUSG00000033222	ProperStrand	50	chr11	62416592	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-5.5221
chr17	6946821	6947086	protein_coding	Ezr	exon	ENSMUSG00000052397	ProperStrand	126	chr19	8963025	8963125	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.1525
chr15	50492552	50492642	protein_coding	Trps1	exon	ENSMUSG00000038679	ProperStrand	14	chr7	29136551	29136598	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.0758
chr5	144936872	144936928	protein_coding	Lmtk2	exon	ENSMUSG00000038970	ProperStrand	60	chr8	13876112	13876202	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	3	-16.1148
chr19	44882589	44882606	protein_coding	Pax2	intron	ENSMUSG00000004231	ProperStrand	6	chr10	23505152	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-9.1162
chr16	36913260	36913360	protein_coding	Golgb1	exon	ENSMUSG00000034243	ProperStrand	92	chr16	23110456	23110532	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.7651
chr3	156213611	156213627	lincRNA	4930570G19Rik	exon	ENSMUSG00000085084	NonProperStrand	11	chr15	76370221	76370321	protein_coding	Slc52a2	exon	ENSMUSG00000022560	ProperStrand	16	11	-inf
chr5	74489231	74489331	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr3	159502831	159502850	protein_coding	Wls	utr5	ENSMUSG00000028173	NonProperStrand	35	1	-6.6876
chr3	82816757	82816774	protein_coding	Fgg	exon	ENSMUSG00000033860	NonProperStrand	321	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	4	-3.6778
chr11	116535466	116535531	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr15	82725610	82725631	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	1	-1.5915
chr11	21459243	21459301	protein_coding	Mdh1	exon	ENSMUSG00000020321	ProperStrand	16	chr14	51690417	51690433	protein_coding	Olfr750	exon	ENSMUSG00000035932	NonProperStrand	16	1	-18.8944
chr9	92468434	92476108	protein_coding	Plod2	exon	ENSMUSG00000032374	ProperStrand	52	chr18	33954851	33954941	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-3.7708
chr17	47607331	47607348	protein_coding	AI661453	utr3	ENSMUSG00000034382	ProperStrand	8	chr10	80644963	80645019	protein_coding	Eef2	utr3	ENSMUSG00000034994	ProperStrand	2244	1	-10.2056
chr11	58592520	58592537	protein_coding	Olfr315	exon	ENSMUSG00000056959	ProperStrand	3	chr1	162965980	162965998	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-9.8232
chr15	37933925	37934019	protein_coding	Ubr5	exon	ENSMUSG00000037487	ProperStrand	258	chr19	8798779	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-2.1592
chr7	116674908	116674926	protein_coding	St5	intron	ENSMUSG00000031024	ProperStrand	42	chr17	35088970	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-6.5729
chr6	51269870	51269887	SINE	B3	B2	chr6B351269829	ProperStrand	4	chr11	69481351	69481441	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	3	-19.4052
chr11	75305347	75308740	protein_coding	Prpf8	exon	ENSMUSG00000020850	ProperStrand	255	chr18	33954827	33954929	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-2.2225
chr8	108050285	108050312	protein_coding	Atp6v0d1	intron	ENSMUSG00000013160	ProperStrand	35	chr19	10620687	10620703	protein_coding	Cpsf7	utr3	ENSMUSG00000034820	ProperStrand	66	1	-14.2098
chr14	55128756	55128799	protein_coding	Prmt5	intron	ENSMUSG00000023110	ProperStrand	72	chr14	76247775	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	4	-12.5464
chr19	8987439	8988834	protein_coding	Ganab	exon	ENSMUSG00000071650	ProperStrand	145	chr18	35714185	35714275	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-3.4852
chr5	100855930	100855974	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr18	56927407	56927426	protein_coding	March3	intron	ENSMUSG00000032656	NonProperStrand	1	1	-inf
chr1	136492462	136499138	protein_coding	Kdm5b	utr5	ENSMUSG00000042207	ProperStrand	223	chr9	120038591	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	3	-3.1654
chr9	23630970	23630989	LINE	Lx5	L1	chr9Lx523630233	ProperStrand	1	chr10	110918639	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-inf
chr8	122129036	122129052	protein_coding	Taf1c	utr5	ENSMUSG00000031832	ProperStrand	26	chr9	65127126	65127142	protein_coding	Cilp	exon	ENSMUSG00000042254	ProperStrand	212	1	-12.4726
chr11	120669542	120669558	protein_coding	Fasn	exon	ENSMUSG00000025153	NonProperStrand	5	chr19	8963086	8963164	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-7.1260
chr4	83938091	83938107	protein_coding	Bnc2	exon	ENSMUSG00000028487	ProperStrand	76	chr18	75161533	75161596	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-6.7337
chr4	56910496	56910618	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	chr9	15118563	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	1	-2.4063
chr7	52303884	52303984	protein_coding	Prr12	exon	ENSMUSG00000046574	ProperStrand	86	chr1	162966001	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-2.9501
chr10	127760732	127763196	protein_coding	Cnpy2	exon	ENSMUSG00000025381	ProperStrand	10	chrX	71517876	71517954	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	7	-19.4487
chr6	124347655	124347696	protein_coding	Pex5	utr3	ENSMUSG00000005069	ProperStrand	27	chr17	81344133	81344150	protein_coding	Tmem178	exon	ENSMUSG00000024245	ProperStrand	67	1	-14.7116
chr17	74845487	74845504	protein_coding	Nlrc4	exon	ENSMUSG00000039193	NonProperStrand	1	chr9	120039542	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-inf
chr9	108720110	108720149	protein_coding	Nckipsd	utr3	ENSMUSG00000032598	ProperStrand	4	chr10	23505149	23505247	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-16.0846
chr6	129136019	129136035	protein_coding	Clec2d	utr3	ENSMUSG00000030157	NonProperStrand	7	chr13	9656624	9656708	protein_coding	Dip2c	intron	ENSMUSG00000048264	ProperStrand	27	3	-inf
chr10	5959511	5959529	protein_coding	Zbtb2	intron	ENSMUSG00000075327	NonProperStrand	1	chr18	35716830	35716849	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-inf
chr18	9877641	9877721	protein_coding	Colec12	utr3	ENSMUSG00000036103	NonProperStrand	10	chr3	40506577	40506667	protein_coding	Intu	utr3	ENSMUSG00000060798	NonProperStrand	17	1	-19.5107
chr17	57209862	57209959	protein_coding	Dennd1c	exon	ENSMUSG00000002668	NonProperStrand	19	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-8.1438
chr3	129686928	129686992	protein_coding	Sec24b	intron	ENSMUSG00000001052	ProperStrand	26	chr4	131908236	131908276	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.7765
chr10	110918600	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	chr17	71990923	71990981	snoRNA	ENSMUSG00000092713_CT010429.1	.	ENSMUSG00000092713	ProperStrand	182	1	-1.5773
chr10	117127384	117127474	protein_coding	Mdm2	exon	ENSMUSG00000020184	ProperStrand	17	chr17	23948617	23948697	protein_coding	Srrm2	utr5	ENSMUSG00000039218	ProperStrand	521	1	-11.5453
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	1	-2.5836
chr17	87832826	87832874	protein_coding	Calm2	utr3	ENSMUSG00000036438	ProperStrand	59	chr4	131908741	131908831	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.2467
chr18	75160735	75160809	protein_coding	Rpl17	intron	ENSMUSG00000062328	ProperStrand	90	chr18	75160711	75160735	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	2	-13.3275
chr10	80644140	80644279	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	1	-1.9776
chr12	88778655	88778767	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	chr19	8799021	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	12	-13.3557
chr3	84886221	84886239	protein_coding	Arfip1	intron	ENSMUSG00000074513	ProperStrand	49	chr19	8800377	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	3	-9.5739
chr3	82816757	82816773	protein_coding	Fgg	exon	ENSMUSG00000033860	NonProperStrand	321	chr11	68886943	68887031	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-1.3013
chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chrX	141318063	141318081	protein_coding	Zcchc16	intron	ENSMUSG00000071679	ProperStrand	7	1	-7.8767
chr4	155232357	155232401	protein_coding	Dvl1	exon	ENSMUSG00000029071	ProperStrand	21	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-6.5949
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr14	61398407	61398423	protein_coding	C1qtnf9	exon	ENSMUSG00000071347	ProperStrand	187	1	-6.3355
chr11	68655668	68657336	protein_coding	Ndel1	exon	ENSMUSG00000018736	ProperStrand	30	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-7.6344
chr13	110231347	110231365	protein_coding	Pde4d	intron	ENSMUSG00000021699	ProperStrand	92	chr8	73419710	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-4.2211
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr14	55476645	55476661	protein_coding	Homez	exon	ENSMUSG00000057156	NonProperStrand	127	1	-7.2208
chr9	20300077	20300133	protein_coding	Zfp266	utr3	ENSMUSG00000060510	ProperStrand	20	chr16	23110852	23110942	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-3.0614
chr8	82214260	82214282	protein_coding	Abce1	exon	ENSMUSG00000058355	ProperStrand	66	chr7	88489209	88489272	protein_coding	Rps17	exon	ENSMUSG00000061787	ProperStrand	105	4	-20.1783
chr15	76333985	76334002	protein_coding	Dgat1	exon	ENSMUSG00000022555	NonProperStrand	2	chr1	34870909	34871004	protein_coding	Fam168b	utr3	ENSMUSG00000037503	ProperStrand	23	1	-20.4378
chr8	74905814	74905904	protein_coding	Eps15l1	intron	ENSMUSG00000006276	ProperStrand	42	chr5	130295452	130295532	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-5.9478
chr9	110845052	110845139	protein_coding	Tdgf1	exon	ENSMUSG00000032494	ProperStrand	218	chr9	64024980	64024998	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	1	-6.5752
chr10	118962887	118962903	protein_coding	Grip1	intron	ENSMUSG00000034813	ProperStrand	38	chr1	102076758	102076790	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	1	-10.3556
chr19	30969166	30969184	protein_coding	Prkg1	exon	ENSMUSG00000052920	NonProperStrand	41	chr16	23111443	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.8215
chr18	6367115	6367204	LTR	MTEb-int	MaLR	chr18MTEb-int6367055	ProperStrand	1	chr18	6367229	6367309	SINE	RSINE1	B4	chr18RSINE16367217	ProperStrand	1	1	-inf
chr7	17396830	17396911	protein_coding	Fkrp	exon	ENSMUSG00000048920	ProperStrand	3	chr11	106362668	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-13.7636
chr14	68370739	68370757	protein_coding	Dock5	utr3	ENSMUSG00000044447	NonProperStrand	4	chr3	95672973	95673073	protein_coding	Mrps21	intron	ENSMUSG00000054312	ProperStrand	2	1	-inf
chr8	13416896	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr9	119011770	119011786	protein_coding	Dlec1	exon	ENSMUSG00000038060	NonProperStrand	27	1	-8.0511
chr2	35021224	35021314	protein_coding	Cep110	exon	ENSMUSG00000057110	ProperStrand	20	chr7	148634725	148634805	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-6.1264
chr17	6945915	6946760	protein_coding	Ezr	exon	ENSMUSG00000052397	ProperStrand	126	chr15	79908929	79908952	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	3	-9.8170
chr2	121949511	121949528	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-2.4285
chr1	172126929	172127019	protein_coding	Uhmk1	utr3	ENSMUSG00000026667	ProperStrand	11	chr9	120039567	120039647	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-6.6296
chr9	40000998	40001047	protein_coding	Zfp202	intron	ENSMUSG00000025602	NonProperStrand	3	chr5	74489590	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-10.0122
chr13	16992121	16992201	protein_coding	5033411D12Rik	intron	ENSMUSG00000055137	NonProperStrand	23	chr13	16995361	16995451	protein_coding	5033411D12Rik	intron	ENSMUSG00000055137	ProperStrand	7	1	-19.1569
chr19	44188369	44188449	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr12	55797815	55797905	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	1	-2.4557
chr11	90483088	90483513	protein_coding	Stxbp4	utr5	ENSMUSG00000020546	ProperStrand	15	chr18	75160711	75160752	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	1	-12.0055
chr18	53884014	53884053	protein_coding	Cep120	exon	ENSMUSG00000048799	ProperStrand	91	chr11	69483189	69483279	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-5.0013
chr7	115789240	115789256	protein_coding	Olfr509	exon	ENSMUSG00000049280	NonProperStrand	1	chr7	116663634	116663767	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-inf
chr9	78023169	78023200	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr9	65049531	65049576	snRNA	ENSMUSG00000075930_U5	.	ENSMUSG00000075930	ProperStrand	175	1	-3.8235
chr3	95678212	95678235	protein_coding	C920021L13Rik	intron	ENSMUSG00000080727	NonProperStrand	1	chr18	35716830	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-inf
chr11	58682398	58682415	protein_coding	2810021J22Rik	utr5	ENSMUSG00000020491	ProperStrand	162	chr7	31759892	31759939	protein_coding	Fam187b	intron	ENSMUSG00000046826	ProperStrand	2	1	-19.2379
chr11	98188902	98188919	protein_coding	Neurod2	exon	ENSMUSG00000038255	NonProperStrand	7	chr19	9047488	9047588	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	1	-13.8925
chr11	103098864	103098881	protein_coding	Map3k14	exon	ENSMUSG00000020941	NonProperStrand	18	chr4	149611390	149611441	protein_coding	Eno1	utr5	ENSMUSG00000063524	ProperStrand	432	1	-11.8022
chr17	46523005	46523031	protein_coding	Zfp318	intron	ENSMUSG00000015597	ProperStrand	44	chr9	120039581	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.8931
chr1	20793500	20798844	protein_coding	Mcm3	utr3	ENSMUSG00000041859	ProperStrand	142	chr5	74489611	74489680	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	6	-13.3233
chr8	86521724	86521784	protein_coding	Samd1	exon	ENSMUSG00000079003	ProperStrand	20	chr9	15119633	15119676	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.6697
chr9	40762540	40762559	protein_coding	4931429I11Rik	intron	ENSMUSG00000032023	NonProperStrand	49	chr17	35087944	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-5.5957
chr15	77356785	77356801	protein_coding	Apol7c	exon	ENSMUSG00000044309	ProperStrand	197	chr7	117190016	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-1.3700
chr6	115757991	115758132	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr18	35714145	35714288	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	16	-1.2815
chr5	132298708	132298725	protein_coding	Auts2	intron	ENSMUSG00000029673	NonProperStrand	37	chr14	51683555	51683577	tRNA	tRNA188-LeuAAG	.	1824304	ProperStrand	6	1	-18.2174
chr8	94358891	94358908	SINE	MIRm	MIR	chr8MIRm94358786	ProperStrand	7	chr8	12757417	12757437	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-13.0159
chr4	43505794	43505930	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr16	37882963	37882979	protein_coding	Lrrc58	utr3	ENSMUSG00000034158	NonProperStrand	45	1	-3.5955
chr1	93012338	93012428	protein_coding	Lrrfip1	exon	ENSMUSG00000026305	ProperStrand	26	chr11	116938557	116938637	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-7.8289
chr2	32563527	32563545	protein_coding	Cdk9	exon	ENSMUSG00000009555	NonProperStrand	49	chr2	153050783	153050799	protein_coding	Tspyl3	exon	ENSMUSG00000074671	ProperStrand	228	1	-11.0444
chr3	88497886	88497966	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	chr7	88674758	88674848	snoRNA	ENSMUSG00000093107_AC167122.1	.	ENSMUSG00000093107	ProperStrand	110	1	-6.2592
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr18	35102297	35102345	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-1.5214
chr19	5770239	5770268	protein_coding	Scyl1	exon	ENSMUSG00000024941	ProperStrand	59	chr16	23110455	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-6.5920
chr13	101249182	101250547	protein_coding	Gtf2h2	exon	ENSMUSG00000021639	ProperStrand	7	chr9	78309007	78309098	protein_coding	Mto1	intron	ENSMUSG00000032342	ProperStrand	3	1	-inf
chr9	89995336	89997139	protein_coding	Morf4l1	exon	ENSMUSG00000062270	ProperStrand	33	chr10	110918555	110918634	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-4.5763
chr13	54700512	54708010	protein_coding	Cltb	exon	ENSMUSG00000047547	ProperStrand	3	chr19	8800377	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-16.2874
chr11	78338796	78338909	protein_coding	Tnfaip1	utr3	ENSMUSG00000017615	ProperStrand	30	chr4	53873613	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	1	-10.4433
chr16	91828191	91828537	protein_coding	Itsn1	exon	ENSMUSG00000022957	ProperStrand	172	chr2	139892286	139892304	protein_coding	Tasp1	utr5	ENSMUSG00000039033	NonProperStrand	7	1	-15.6383
chr6	128322002	128322018	protein_coding	Foxm1	exon	ENSMUSG00000001517	NonProperStrand	66	chr4	131908810	131908871	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.0969
chr7	19590197	19590213	protein_coding	Irf2bp1	exon	ENSMUSG00000044030	NonProperStrand	81	chr12	112779260	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-4.2029
chr12	68767288	68767393	LTR	MTA_Mm	MaLR	chr12MTA_Mm68767132	NonProperStrand	3	chr17	63416252	63416731	protein_coding	Fbxl17	intron	ENSMUSG00000023965	ProperStrand	14	2	-inf
chr7	148634681	148634769	protein_coding-noncoding	Rplp2	utr5	ENSMUSG00000025508	ProperStrand	11	chr16	23110495	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-13.5122
chr7	25779725	25782202	protein_coding	Atp1a3	exon	ENSMUSG00000040907	ProperStrand	66	chr16	23111415	23111505	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.1306
chr4	131826039	131826122	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	chr7	52382753	52382828	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-2.8644
chr2	119596737	119596774	protein_coding	Rpap1	exon	ENSMUSG00000034032	ProperStrand	96	chr11	98878374	98878456	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-5.3633
chr12	104662465	104662511	protein_coding	Ddx24	exon	ENSMUSG00000041645	ProperStrand	34	chr4	134926614	134927796	protein_coding	A330049M08Rik	exon	ENSMUSG00000043924	ProperStrand	130	1	-12.9067
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr19	10687425	10687452	protein_coding	Ddb1	exon	ENSMUSG00000024740	ProperStrand	304	2	-5.5896
chr11	33056667	33060421	protein_coding	Npm1	exon	ENSMUSG00000057113	ProperStrand	352	chr11	62418014	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	5	-10.8244
chr12	110899010	110899058	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr7	26472435	26472451	protein_coding	Tgfb1	utr5	ENSMUSG00000002603	NonProperStrand	154	1	-6.7905
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr4	155114013	155114030	protein_coding	Gm5151	exon	ENSMUSG00000084845	ProperStrand	16	1	-11.3982
chr12	12946783	12946851	protein_coding	Mycn	exon	ENSMUSG00000037169	ProperStrand	24	chr11	68887043	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-5.9266
chr5	100855944	100855974	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr18	35404428	35404502	protein_coding	Ctnna1	exon	ENSMUSG00000037815	ProperStrand	115	1	-5.3605
chr9	69339392	69339424	protein_coding	Anxa2	utr3	ENSMUSG00000032231	ProperStrand	43	chr11	99885311	99885327	protein_coding	Krt33b	exon	ENSMUSG00000057723	NonProperStrand	352	1	-10.4398
chr11	69219829	69219925	protein_coding	Kdm6b	exon	ENSMUSG00000018476	ProperStrand	76	chr9	15118323	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.0380
chr12	17552949	17553087	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr10	23505559	23505626	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	4	-2.8139
chr7	117189957	117190037	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	chr16	56035865	56035984	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	6	-4.0323
chr18	60718361	60718377	protein_coding	Dctn4	utr3	ENSMUSG00000024603	NonProperStrand	6	chr11	68886975	68887033	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-8.8009
chr11	78313939	78313956	protein_coding	Vtn	exon	ENSMUSG00000017344	ProperStrand	188	chr9	120039533	120039656	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-2.6838
chr4	140701918	140701984	SINE	B1_Mus2	Alu	chr4B1_Mus2140701900	ProperStrand	1	chr17	35087895	35087946	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-inf
chr7	53121029	53121129	protein_coding	Grin2d	intron	ENSMUSG00000002771	ProperStrand	3	chr10	23505152	23505200	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-6.9610
chr9	95525016	95525035	antisense	Gm16126	.	ENSMUSG00000086585	NonProperStrand	229	chr9	120039533	120039661	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.1540
chr1	135544048	135544095	protein_coding	Zc3h11a	utr5	ENSMUSG00000026464	ProperStrand	102	chr7	116664822	116664912	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.6852
chr3	151980610	151980628	protein_coding	Fam73a	exon	ENSMUSG00000054942	ProperStrand	34	chr8	129468746	129468831	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	3	-12.8938
chr18	62567495	62567511	protein_coding	Htr4	intron	ENSMUSG00000026322	ProperStrand	18	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-10.1739
chr11	17847007	17847056	protein_coding	Etaa1	exon	ENSMUSG00000016984	ProperStrand	7	chr19	8963027	8963052	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-6.3961
chr8	87196777	87196867	protein_coding	Nacc1	utr3	ENSMUSG00000001910	ProperStrand	130	chr19	8800377	8800457	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-2.1742
chr11	102060738	102060754	protein_coding	Hdac5	exon	ENSMUSG00000008855	NonProperStrand	39	chr17	35087896	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-6.0455
chr2	157942862	157942952	protein_coding	Tgm2	utr3	ENSMUSG00000037820	ProperStrand	44	chr19	8963047	8963127	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.8083
chr12	83019896	83019973	protein_coding	Pcnx	exon	ENSMUSG00000021140	ProperStrand	32	chr10	23505190	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.1928
chr4	57770393	57770470	protein_coding	Akap2	intron	ENSMUSG00000038729	ProperStrand	14	chr7	116663638	116663728	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-5.2435
chr19	46022236	46022252	protein_coding	9130011E15Rik	intron	ENSMUSG00000039901	ProperStrand	129	chr7	52714454	52714492	protein_coding	Ftl1	exon	ENSMUSG00000050708	ProperStrand	807	1	-6.5957
chr9	44314692	44314792	protein_coding	Bcl9l	exon	ENSMUSG00000063382	ProperStrand	12	chr11	62416611	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-8.3961
chr11	119136228	119136244	protein_coding	Gaa	exon	ENSMUSG00000025579	NonProperStrand	201	chr6	70794803	70794820	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	1	-8.9994
chr6	82724118	82724148	protein_coding	Hk2	utr5	ENSMUSG00000000628	ProperStrand	88	chr11	69483142	69483237	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-5.1185
chr5	115939506	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr4	116826700	116826722	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-1.7626
chr2	90235292	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	88247738	88247875	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	18	-4.8513
chr6	144443231	144443249	lincRNA	Gm15685	intron	ENSMUSG00000087157	ProperStrand	24	chr2	26494792	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.8333
chr6	107738191	107738208	Other	RMER1B	Other	chr6RMER1B107738112	ProperStrand	29	chr1	162967115	162967174	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	1	-10.1455
chrX	55564888	55564978	LINE	Lx9	L1	chrXLx955564445	ProperStrand	1	chrX	55565100	55565180	LINE	Lx9	L1	chrXLx955565012	NonProperStrand	1	1	-inf
chr11	53225857	53225876	protein_coding	Aff4	intron	ENSMUSG00000049470	ProperStrand	94	chr9	64022854	64022927	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-7.1311
chr10	53794257	53794274	protein_coding	Man1a	exon	ENSMUSG00000003746	NonProperStrand	8	chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	1	-12.2412
chr4	155428212	155428264	processed_transcript	Gm13648	.	ENSMUSG00000086549	ProperStrand	2	chr16	23110985	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-inf
chr10	61325507	61325524	protein_coding	Col13a1	exon	ENSMUSG00000058806	ProperStrand	120	chr9	15118246	15118293	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-2.2492
chr7	13880780	13880880	protein_coding	Lig1	exon	ENSMUSG00000056394	ProperStrand	89	chr19	8799854	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-4.1926
chr17	39985599	39985699	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr2	166889015	166889036	snoRNA	ENSMUSG00000077515_SNORD12	.	ENSMUSG00000077515	ProperStrand	191	1	-3.7128
chr10	122003166	122003246	LINE	L1Md_F2	L1	chr10L1Md_F2122002095	ProperStrand	17	chr13	4763631	4763721	LINE	L1Md_F2	L1	chr13L1Md_F24763603	ProperStrand	1	1	-inf
chr17	32159799	32170280	protein_coding	Hsf2bp	exon	ENSMUSG00000002076	ProperStrand	17	chr10	23505151	23505231	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.3129
chr4	32771700	32772651	protein_coding	Mdn1	exon	ENSMUSG00000058006	ProperStrand	184	chr5	111121066	111121150	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	2	-7.1087
chr3	95543316	95543335	protein_coding	Ecm1	exon	ENSMUSG00000028108	NonProperStrand	2	chr12	88488443	88496423	protein_coding	Pomt2	exon	ENSMUSG00000034126	NonProperStrand	331	1	-17.3811
chr16	13740793	13740852	LTR	ORR1E	MaLR	chr16ORR1E13740747	NonProperStrand	1	chr1	63260754	63260771	protein_coding	Gpr1	utr5	ENSMUSG00000046856	NonProperStrand	32	1	-inf
chr5	112736750	112736840	protein_coding	Tpst2	exon	ENSMUSG00000029344	ProperStrand	34	chr7	117166761	117166842	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	8	-19.5145
chr11	116535915	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr16	56035865	56035965	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	1	-1.9174
chr14	77650026	77650116	protein_coding	Enox1	intron	ENSMUSG00000022012	ProperStrand	16	chr3	86953746	86953836	protein_coding	Kirrel	intron	ENSMUSG00000041734	ProperStrand	22	1	-17.9664
chr3	89904359	89904459	protein_coding	Tpm3	utr3	ENSMUSG00000027940	ProperStrand	55	chr10	23505152	23505218	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.3541
chr9	105551029	105551118	protein_coding	Pik3r4	exon	ENSMUSG00000032571	ProperStrand	49	chr17	13115731	13115783	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	1	-7.9383
chr18	38412605	38413647	protein_coding	0610009O20Rik	exon	ENSMUSG00000024442	ProperStrand	25	chr7	29136618	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.9451
chr3	17192519	17192609	LTR	MTA_Mm-int	MaLR	chr3MTA_Mm-int17191666	ProperStrand	1	chr3	17192788	17192868	LTR	MTA_Mm	MaLR	chr3MTA_Mm17192759	ProperStrand	1	1	-inf
chr14	67607303	67607322	protein_coding	Bnip3l	intron	ENSMUSG00000022051	ProperStrand	30	chr4	131865855	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.9337
chr4	122969074	122970185	protein_coding	Pabpc4	exon	ENSMUSG00000011257	ProperStrand	85	chr9	30968918	30969350	protein_coding	Aplp2	exon	ENSMUSG00000031996	ProperStrand	172	1	-10.5000
chr12	114365025	114365115	protein_coding	Mta1	intron	ENSMUSG00000021144	NonProperStrand	11	chr7	105245572	105245652	protein_coding	Myo7a	intron	ENSMUSG00000030761	NonProperStrand	33	1	-17.6063
chr1	9675799	9675871	protein_coding	Mybl1	exon	ENSMUSG00000025912	ProperStrand	10	chr1	89681188	89681278	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-9.0594
chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr2	160191558	160191574	protein_coding	Mafb	exon	ENSMUSG00000074622	ProperStrand	31	1	-4.8473
chr15	85706095	85706117	protein_coding	Gtse1	exon	ENSMUSG00000022385	ProperStrand	74	chr4	131908811	131908871	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.9524
chr13	86396455	86396545	LINE	L1Md_A	L1	chr13L1Md_A86395783	NonProperStrand	1	chr7	54441836	54441926	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	1	-inf
chr11	77654998	77655051	protein_coding	Myo18a	exon	ENSMUSG00000000631	ProperStrand	124	chr11	80415108	80415125	protein_coding	Myo1d	exon	ENSMUSG00000035441	ProperStrand	144	1	-10.0989
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr5	108336415	108336494	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-2.2600
chr8	96703212	96704009	protein_coding	Mt1	exon	ENSMUSG00000031765	ProperStrand	92	chr7	148634806	148634836	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-3.1976
chr9	83488297	83490874	protein_coding	Sh3bgrl2	exon	ENSMUSG00000032261	ProperStrand	21	chr11	68886949	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	4	-18.6490
chr10	76534055	76534402	protein_coding	Col18a1	exon	ENSMUSG00000001435	ProperStrand	287	chr2	32818810	32818890	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-2.5622
chr5	115939511	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr8	113362429	113362476	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	1	-3.9294
chr7	30026273	30026289	protein_coding	Yif1b	intron	ENSMUSG00000030588	ProperStrand	154	chr4	82868105	82868125	protein_coding	Ttc39b	utr3	ENSMUSG00000038172	ProperStrand	78	1	-10.8941
chr18	35931287	35931377	protein_coding	Ube2d2	utr5	ENSMUSG00000091896	ProperStrand	20	chr5	130300460	130300540	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.5361
chr15	79371564	79372952	protein_coding	Ddx17	exon	ENSMUSG00000055065	ProperStrand	140	chr2	158184116	158184206	snoRNA	ENSMUSG00000064995_SNORA71	.	ENSMUSG00000064995	ProperStrand	430	13	-19.0257
chr7	50690726	50690742	protein_coding	Lim2	exon	ENSMUSG00000004613	NonProperStrand	50	chr1	162965531	162965574	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.6110
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr18	69806424	69806442	protein_coding	Tcf4	intron	ENSMUSG00000053477	NonProperStrand	19	1	-10.9212
chr11	48616690	48616706	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	chr2	91436226	91436339	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-3.6605
chr19	59534008	59534026	protein_coding	Emx2	exon	ENSMUSG00000043969	NonProperStrand	87	chr5	121655016	121655098	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.0684
chr1	24621377	24621394	protein_coding	Gm10925	exon	ENSMUSG00000090378	NonProperStrand	70	chr1	162968460	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-5.7760
chr4	122968617	122968718	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	chr19	8799027	8799095	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	5	-2.8737
chr5	123622050	123622066	protein_coding	Hpd	exon	ENSMUSG00000029445	ProperStrand	254	chr1	162967734	162967780	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	1	-7.3666
chr4	43505775	43505865	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr8	4288592	4288624	protein_coding	Elavl1	utr3	ENSMUSG00000040028	ProperStrand	39	1	-3.8628
chr17	68153873	68154784	protein_coding	Lama1	exon	ENSMUSG00000032796	ProperStrand	168	chr11	97642952	97643009	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-0.9364
chr16	11087119	11087209	protein_coding	Txndc11	utr3	ENSMUSG00000022498	ProperStrand	11	chrX	148294280	148294360	protein_coding	Huwe1	intron	ENSMUSG00000025261	ProperStrand	501	1	-12.5279
mmu-miR-2137	0	19	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	chr4	131908302	131908416	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-1.6575
chr8	3642156	3642172	protein_coding	Stxbp2	intron	ENSMUSG00000004626	NonProperStrand	73	chr13	99124522	99124600	protein_coding	Foxd1	utr5	ENSMUSG00000078302	ProperStrand	1	1	-inf
chr10	62275281	62342389	protein_coding	Tet1	exon	ENSMUSG00000047146	ProperStrand	286	chr11	97642952	97643074	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-0.9044
chr11	45723144	45723160	protein_coding	Clint1	utr3	ENSMUSG00000006169	NonProperStrand	273	chr11	106362639	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-4.4445
chr11	58990701	58990717	protein_coding	Gjc2	exon	ENSMUSG00000043448	ProperStrand	8	chr17	39985558	39985658	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-10.0353
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr19	6984447	6984463	protein_coding	Prdx5	utr5	ENSMUSG00000024953	ProperStrand	24	1	-10.4562
chr11	54294586	54294645	protein_coding	Fnip1	intron	ENSMUSG00000035992	ProperStrand	16	chr11	113762911	113762929	protein_coding	Sdk2	intron	ENSMUSG00000041592	NonProperStrand	98	1	-15.0227
chr7	87514552	87514568	protein_coding	Man2a2	exon	ENSMUSG00000038886	NonProperStrand	4	chr18	33954827	33954895	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-9.0265
chr11	6428075	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr2	130101241	130101310	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	13	-2.4060
chr9	53360367	53360406	protein_coding	Npat	exon	ENSMUSG00000033054	ProperStrand	20	chr1	88252838	88252892	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	3	-19.7815
chr1	182530286	182530615	protein_coding	Parp1	exon	ENSMUSG00000026496	ProperStrand	227	chr12	60141322	60141402	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	2	-7.0798
chr16	4114850	4114950	protein_coding	Crebbp	exon	ENSMUSG00000022521	ProperStrand	56	chr7	116663716	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.6307
chr7	31365472	31365528	protein_coding	Wbp7	exon	ENSMUSG00000006307	ProperStrand	180	chr19	23332023	23332040	protein_coding	Smc5	exon	ENSMUSG00000024943	ProperStrand	146	1	-9.3261
chr6	120747931	120751070	protein_coding	Atp6v1e1	exon	ENSMUSG00000019210	ProperStrand	22	chr2	35572687	35572724	protein_coding	Dab2ip	exon	ENSMUSG00000026883	ProperStrand	93	2	-21.1696
mmu-miR-6240	1	23	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	1	-2.6838
chr11	88706707	88706726	protein_coding	Akap1	exon	ENSMUSG00000018428	ProperStrand	45	chr11	116938695	116938750	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-6.7291
chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	chr7	19479190	19479291	protein_coding	Ccdc61	exon	ENSMUSG00000074358	ProperStrand	27	1	-12.3785
chr6	56828734	56828751	protein_coding	Fkbp9	utr3	ENSMUSG00000029781	NonProperStrand	6	chr16	23111706	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-18.9947
chr2	90235285	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	87138823	87154416	protein_coding	Antxr1	exon	ENSMUSG00000033420	ProperStrand	70	2	-6.9816
chr7	118219574	118219641	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	11	-0.8160
chr1	44058252	44059007	protein_coding	Tpp2	exon	ENSMUSG00000041763	ProperStrand	22	chr4	131865429	131865509	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-5.9525
chr7	30074412	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr14	55329702	55330293	protein_coding	Cebpe	exon	ENSMUSG00000052435	NonProperStrand	14	1	-13.3943
chr18	67561250	67561329	protein_coding	Tubb6	exon	ENSMUSG00000001473	ProperStrand	10	chr4	131866238	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	3	-16.6521
chr2	129998683	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr5	121975281	121975297	protein_coding	Mapkapk5	intron	ENSMUSG00000029454	ProperStrand	22	1	-10.1352
chr1	60134181	60134200	protein_coding	Wdr12	utr3	ENSMUSG00000026019	NonProperStrand	1	chr11	69483195	69483263	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-inf
chr5	114224488	114224558	protein_coding	Iscu	intron	ENSMUSG00000025825	ProperStrand	15	chr1	167522963	167523063	protein_coding	Mpzl1	utr3	ENSMUSG00000026566	ProperStrand	27	1	-17.7183
chr2	13594213	13618466	protein_coding	St8sia6	exon	ENSMUSG00000003418	ProperStrand	5	chr4	131908356	131908438	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-15.0190
chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	chr4	122970392	122970509	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-4.6448
chr11	32635308	32635327	protein_coding	Fbxw11	exon	ENSMUSG00000020271	NonProperStrand	31	chr16	23110966	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.0160
chr17	45810711	45810771	protein_coding	Tmem63b	exon	ENSMUSG00000036026	ProperStrand	93	chr8	129468781	129468811	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-3.5909
chr10	41239339	41239416	protein_coding	Cd164	utr5	ENSMUSG00000019818	ProperStrand	38	chr7	148634708	148634798	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	14	-inf
chr17	34020685	34020706	protein_coding	Kifc1	exon	ENSMUSG00000079553	ProperStrand	47	chr2	26494715	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.5527
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr6	86731276	86731292	protein_coding	Anxa4	intron	ENSMUSG00000029994	ProperStrand	47	1	-9.2063
chr10	128061646	128063284	protein_coding	Rps26	exon	ENSMUSG00000025362	ProperStrand	67	chr16	23110847	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	8	-6.4115
chr1	77365949	77366024	protein_coding	Epha4	utr3	ENSMUSG00000026235	ProperStrand	57	chr10	110918550	110918640	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-3.5431
chr4	63389602	63389618	protein_coding	Tnfsf15	utr3	ENSMUSG00000050395	NonProperStrand	121	chr1	162965530	162965588	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.0642
chr11	50084728	50084754	lincRNA	Gm16641	intron	ENSMUSG00000085364	ProperStrand	3	chr5	100872231	100872248	protein_coding	Lin54	utr3	ENSMUSG00000035310	ProperStrand	21	1	-20.8842
chr11	100414998	100415014	protein_coding	Ttc25	exon	ENSMUSG00000006784	NonProperStrand	119	chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	1	-9.2455
chr2	32818749	32818871	protein_coding-noncoding	Rpl12	utr5	ENSMUSG00000038900	ProperStrand	68	chr2	32818851	32818950	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	22	-19.4481
chr10	6190693	6190793	protein_coding	Mthfd1l	utr3	ENSMUSG00000040675	ProperStrand	50	chr15	98350146	98350199	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-5.1134
chr10	79756397	79756487	protein_coding	Rps15	exon	ENSMUSG00000063457	ProperStrand	119	chr16	23111450	23111497	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-1.0568
chr8	83288621	83324298	protein_coding	Gab1	exon	ENSMUSG00000031714	ProperStrand	72	chr10	23505151	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	6	-8.0727
chr3	97374288	97374887	protein_coding	Chd1l	exon	ENSMUSG00000028089	ProperStrand	15	chr4	131865869	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.2332
chr7	147130203	147130293	protein_coding	Utf1	exon	ENSMUSG00000047751	ProperStrand	67	chr5	130300432	130300512	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	7	-16.5733
chr9	120037898	120037980	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	NonProperStrand	19	chr16	23110964	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	NonProperStrand	93	2	-19.9377
chr11	3245706	3245786	protein_coding	Limk2	utr3	ENSMUSG00000020451	ProperStrand	100	chr12	106269284	106269374	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-3.1952
chr2	164521970	164521987	SINE	B4A	B4	chr2B4A164521909	ProperStrand	41	chr4	131865381	131865427	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-4.7287
chr15	54697505	54697522	protein_coding	Enpp2	exon	ENSMUSG00000022425	ProperStrand	31	chr4	131908356	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.4690
chr10	57917390	57917445	protein_coding	Ranbp2	exon	ENSMUSG00000003226	ProperStrand	52	chr11	55296285	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	2	-10.4621
chr1	89105750	89105766	protein_coding	Chrng	exon	ENSMUSG00000026253	NonProperStrand	130	chr18	73693113	73693190	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	2	-6.7742
chr1	20922259	20922275	protein_coding	Paqr8	utr5	ENSMUSG00000025931	NonProperStrand	60	chr12	17552964	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-5.0892
chr11	97490687	97490777	protein_coding	E130012A19Rik	utr5	ENSMUSG00000043439	ProperStrand	83	chr1	162966189	162966267	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-6.9307
chr4	132978241	132978341	protein_coding	Slc9a1	utr3	ENSMUSG00000028854	ProperStrand	28	chr4	131908236	131908312	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.6458
chr7	119785311	119785329	lincRNA	2310014F06Rik	intron	ENSMUSG00000085945	NonProperStrand	25	chr15	79748219	79748273	protein_coding	Cbx7	utr3	ENSMUSG00000053411	ProperStrand	62	1	-15.0341
chr5	145307078	145307178	protein_coding	Nptx2	exon	ENSMUSG00000059991	ProperStrand	15	chr16	23110912	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-3.8284
chr1	155086393	155179326	protein_coding	Lamc1	exon	ENSMUSG00000026478	ProperStrand	239	chrX	34622906	34623022	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-1.9649
chr7	13508344	13508365	protein_coding	Rps5	exon	ENSMUSG00000012848	ProperStrand	108	chr2	26494754	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-3.7662
chr11	6428040	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr10	107800717	107800845	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	9	-4.2163
chr7	34942372	34946603	protein_coding	Uba2	exon	ENSMUSG00000052997	ProperStrand	165	chr11	97642952	97643090	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-1.9055
chr18	43349968	43350058	DNA	URR1B	MER1_type	chr18URR1B43349952	ProperStrand	1	chr18	43349754	43349834	LTR	MLT1A1	MaLR	chr18MLT1A143349691	ProperStrand	1	1	-inf
chr4	131888437	131888494	protein_coding	Rcc1	utr3	ENSMUSG00000028896	ProperStrand	55	chr3	123210854	123210906	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-3.9567
chr13	67852129	67852146	protein_coding	4930441O14Rik	intron	ENSMUSG00000044081	ProperStrand	13	chrX	71517910	71517958	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-9.6389
chr2	115500429	115500476	protein_coding	BC052040	intron	ENSMUSG00000040282	ProperStrand	20	chr16	23110981	23111005	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.6223
chr7	73741765	73741781	LINE	L1M5	L1	chr7L1M573741670	ProperStrand	1	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-inf
chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	chr17	35087894	35087965	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	5	-8.9238
chr2	158185576	158185654	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr4	116828379	116828456	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-1.9344
chr6	47746378	47746490	protein_coding	Pdia4	utr3	ENSMUSG00000025823	ProperStrand	41	chr8	73419712	73419729	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	4	-12.6356
chr19	4129850	4129917	processed_transcript	Tmem134	.	ENSMUSG00000024845	ProperStrand	3	chr7	29136542	29136638	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-8.4253
chr15	83770046	83770063	protein_coding	Efcab6	intron	ENSMUSG00000022441	ProperStrand	60	chr9	15118256	15118283	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.4666
chr8	122296458	122297225	protein_coding	4632415K11Rik	exon	ENSMUSG00000034105	ProperStrand	3	chr9	15118334	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-9.6743
chr7	52309977	52309993	protein_coding	Prrg2	exon	ENSMUSG00000007837	NonProperStrand	281	chr11	106362640	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-4.3898
chr1	16121578	16121595	protein_coding	Rdh10	utr3	ENSMUSG00000025921	ProperStrand	4	chr4	131865867	131865963	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-11.7931
chr4	137790218	137790243	protein_coding	Hp1bp3	exon	ENSMUSG00000028759	ProperStrand	21	chr9	87598732	87598748	protein_coding	Tbx18	utr3	ENSMUSG00000032419	NonProperStrand	4	1	-20.6328
chr4	132978251	132978341	protein_coding	Slc9a1	utr3	ENSMUSG00000028854	ProperStrand	28	chr3	68889094	68889174	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-4.6927
chr1	51920212	51920228	protein_coding	Myo1b	exon	ENSMUSG00000018417	NonProperStrand	3	chr4	131865855	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.6896
chr8	125626936	125627005	snoRNA	ENSMUSG00000064450_Snord68	.	ENSMUSG00000064450	ProperStrand	181	chr1	88252836	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-4.4904
chr11	58795625	58795642	protein_coding	Trim11	exon	ENSMUSG00000020455	ProperStrand	43	chr11	77995203	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-6.8433
chr9	120039529	120039619	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	chr1	162967735	162967807	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	1	-0.9142
chr7	138325527	138325545	protein_coding	5430419D17Rik	exon	ENSMUSG00000006204	ProperStrand	1	chr12	17552963	17553050	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-inf
chr8	120110364	120113181	protein_coding	Plcg2	exon	ENSMUSG00000034330	ProperStrand	57	chr16	23110990	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-2.4727
chr9	15119967	15120011	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	chr15	98356818	98356896	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	2	-3.6837
chr8	11360525	11427572	protein_coding	Col4a2	intron	ENSMUSG00000031503	ProperStrand	74	chr14	31827477	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	2	-10.5532
chr9	20943903	20943952	protein_coding	Cdc37	utr3	ENSMUSG00000019471	ProperStrand	97	chr11	55296276	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	3	-12.2583
chr5	130076956	130076972	protein_coding	Sfswap	utr3	ENSMUSG00000029439	ProperStrand	34	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.8923
chr17	29175461	29175480	protein_coding	Srsf3	exon	ENSMUSG00000071172	ProperStrand	23	chr3	95980284	95980374	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	2	-13.9894
chr3	33963181	33967122	protein_coding	Fxr1	exon	ENSMUSG00000027680	ProperStrand	58	chr12	70259694	70259719	protein_coding	Rps29	exon	ENSMUSG00000034892	ProperStrand	124	1	-11.9248
chr1	42755254	42755270	protein_coding	Pou3f3	exon	ENSMUSG00000045515	NonProperStrand	117	chr15	79913300	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.4061
chr1	53006094	53006184	protein_coding	1700019D03Rik	intron	ENSMUSG00000043629	ProperStrand	39	chr3	123210899	123210979	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	4	-9.9193
chr16	57391759	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr3	130936841	130936877	protein_coding	Hadh	utr3	ENSMUSG00000027984	ProperStrand	35	2	-14.1082
chr10	80643645	80643719	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr10	23505559	23505605	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-1.0476
chr7	34987337	34987387	protein_coding	Gpi1	utr3	ENSMUSG00000036427	ProperStrand	288	chr2	125499562	125499579	protein_coding	Eid1	utr3	ENSMUSG00000091337	ProperStrand	60	1	-10.1695
chr11	82692475	82692491	protein_coding	Rad51l3	exon	ENSMUSG00000018841	ProperStrand	112	chr11	106362556	106362580	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-6.1688
chr12	114290175	114290191	protein_coding	Pacs2	intron	ENSMUSG00000021143	NonProperStrand	302	chr7	30772767	30772800	protein_coding	Zfp568	utr5	ENSMUSG00000074221	ProperStrand	110	1	-8.8598
chr17	15092165	15093001	protein_coding	Phf10	exon	ENSMUSG00000023883	ProperStrand	10	chr17	13112450	13112528	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	3	-18.7200
chr9	34841575	34841610	protein_coding	Kirrel3	intron	ENSMUSG00000032036	NonProperStrand	24	chr16	23110913	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-5.9609
chr19	7583917	7584007	protein_coding	Atl3	exon	ENSMUSG00000024759	ProperStrand	21	chr18	35714147	35714227	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-5.4554
chr7	53326228	53327889	protein_coding	Nomo1	exon	ENSMUSG00000030835	ProperStrand	85	chr17	13184995	13185015	protein_coding	Wtap	utr5	ENSMUSG00000060475	ProperStrand	119	3	-19.0955
chr16	3856858	3856877	protein_coding	Zfp174	utr3	ENSMUSG00000054939	NonProperStrand	166	chr10	23505152	23505260	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-1.7261
chrX	12870274	12870308	protein_coding	Ddx3x	utr3	ENSMUSG00000000787	ProperStrand	67	chr16	37822777	37826869	protein_coding	Fstl1	exon	ENSMUSG00000022816	ProperStrand	179	7	-19.3122
chr13	56804478	56824791	protein_coding	Smad5	utr5	ENSMUSG00000021540	ProperStrand	47	chr1	88423316	88423428	protein_coding	Ptma	utr5	ENSMUSG00000026238	ProperStrand	385	1	-10.0814
chr11	6428035	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr16	43886794	43886929	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	5	-1.2761
chr9	65044377	65044445	snRNA	ENSMUSG00000075763_U5	.	ENSMUSG00000075763	ProperStrand	216	chr4	116826700	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	9	-19.5472
chr12	73862455	73862497	protein_coding	Ppm1a	utr5	ENSMUSG00000021096	ProperStrand	53	chr3	113827103	113827119	protein_coding	Col11a1	utr3	ENSMUSG00000027966	NonProperStrand	139	1	-11.8761
chr2	25915656	25915672	protein_coding	Nacc2	exon	ENSMUSG00000026932	ProperStrand	98	chr9	21584282	21584304	protein_coding	Kank2	exon	ENSMUSG00000032194	ProperStrand	196	1	-9.9536
chr5	115939531	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr11	68886930	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	3	-1.0975
chr8	87047107	87057343	protein_coding	Cacna1a	exon	ENSMUSG00000034656	ProperStrand	35	chr1	162968217	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	2	-12.6310
chr3	95741062	95741817	protein_coding	Anp32e	exon	ENSMUSG00000015749	ProperStrand	25	chr3	136526736	136526753	protein_coding	Ppp3ca	intron	ENSMUSG00000028161	NonProperStrand	120	1	-13.6950
chr7	146082761	146082833	protein_coding	Bnip3	utr3	ENSMUSG00000078566	ProperStrand	20	chr7	117166827	117166858	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-6.9885
chr3	95980278	95980321	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	chr1	9932550	9932623	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-1.7167
chr3	96218462	96218562	misc_RNA	Telomerase-vert	.	ENSMUSG00000064796	ProperStrand	443	chr11	68886975	68887032	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-0.8873
chr11	121169085	121169156	protein_coding	Foxk2	utr3	ENSMUSG00000039275	ProperStrand	38	chr16	23110530	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	5	-14.2936
chr13	9833561	9833675	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr3	94894545	94894586	snoRNA	ENSMUSG00000064952_SNORD62	.	ENSMUSG00000064952	ProperStrand	75	2	-7.5217
chr13	9833552	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr15	82658439	82658539	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	1	-0.9240
chr12	76554103	76554177	protein_coding	Ppp2r5e	utr3	ENSMUSG00000021051	ProperStrand	9	chr16	23110911	23110961	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-5.3337
chr4	133520831	133520872	protein_coding	Hmgn2	utr3	ENSMUSG00000003038	ProperStrand	20	chr9	120039650	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-8.9354
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr3	89182791	89182807	protein_coding	Zbtb7b	utr3	ENSMUSG00000028042	ProperStrand	19	1	-11.0446
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr9	59518474	59518510	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	1	-2.9108
chr12	110881047	110881115	lincRNA	Rian	intron	ENSMUSG00000091793	ProperStrand	612	chr17	35299566	35299630	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	7	-9.2080
chr10	79322549	79322589	protein_coding	Ptbp1	exon	ENSMUSG00000006498	ProperStrand	129	chr16	23111690	23111727	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-0.8392
chr13	55755831	55755847	protein_coding	Ddx46	intron	ENSMUSG00000021500	ProperStrand	87	chr18	73693167	73693187	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-4.8033
chr11	97949355	97949431	protein_coding	Fbxl20	utr3	ENSMUSG00000020883	ProperStrand	23	chr15	76465274	76466554	protein_coding	Tonsl	exon	ENSMUSG00000059323	ProperStrand	8	1	-18.6862
chr18	34880002	34880019	protein_coding	Gfra3	utr5	ENSMUSG00000024366	ProperStrand	41	chr4	131865855	131865901	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.3878
chr10	79501319	79502338	protein_coding	Polr2e	exon	ENSMUSG00000004667	ProperStrand	37	chr6	94776857	94776875	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	1	-10.0745
chr4	43505657	43505906	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chrX	148315120	148366392	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	3	-1.1345
chr10	6080125	6080215	protein_coding	Akap12	utr5	ENSMUSG00000038587	ProperStrand	1008	chr17	24856655	24856735	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-1.3563
chr9	15069885	15069901	protein_coding	Med17	exon	ENSMUSG00000031935	ProperStrand	135	chr12	106269441	106269559	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-2.6645
chr8	110108150	110108859	protein_coding	Psmd7	exon	ENSMUSG00000039067	ProperStrand	36	chr11	77995191	77995227	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-7.1982
chr17	24856737	24856801	antisense	Snhg9	.	ENSMUSG00000090101	ProperStrand	218	chr9	78023109	78023150	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	1	-3.4191
chr14	87659491	87659512	LTR	MTEa	MaLR	chr14MTEa87659331	NonProperStrand	83	chr8	124956756	124956808	protein_coding	Cyba	utr5	ENSMUSG00000006519	ProperStrand	4	1	-18.2515
chr9	44722859	44722879	protein_coding	Atp5l	exon	ENSMUSG00000038717	ProperStrand	10	chr11	69483136	69483262	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-5.8555
chr19	29659050	29678596	protein_coding	C030046E11Rik	intron	ENSMUSG00000038658	ProperStrand	104	chr16	23111371	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-2.1971
chr11	63885336	63887052	protein_coding	Cox10	exon	ENSMUSG00000042148	NonProperStrand	187	chr11	106362605	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	2	-8.4878
chr11	98782478	98782578	protein_coding	Cdc6	utr3	ENSMUSG00000017499	ProperStrand	27	chr7	67123695	67123729	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	4	-inf
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	39634128	39634144	protein_coding	Rnf149	utr5	ENSMUSG00000048234	NonProperStrand	20	1	-6.6233
chr7	119401023	119401039	protein_coding	Mical2	intron	ENSMUSG00000038244	ProperStrand	3	chr5	121655016	121655093	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-9.9796
chr10	76515425	76515479	protein_coding	Col18a1	utr3	ENSMUSG00000001435	ProperStrand	287	chr19	8798484	8798515	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-2.3358
chr19	6117999	6118099	protein_coding	Sac3d1	exon	ENSMUSG00000024790	ProperStrand	7	chr1	129869718	129872732	protein_coding	Zranb3	exon	ENSMUSG00000036086	ProperStrand	19	1	-19.8654
chr1	33786848	33786869	protein_coding	Rab23	intron	ENSMUSG00000004768	NonProperStrand	1	chr3	88497852	88497924	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-inf
chr13	38605011	38610919	protein_coding	Txndc5	exon	ENSMUSG00000038991	ProperStrand	48	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-9.3750
chr2	25312429	25313191	protein_coding	Clic3	exon	ENSMUSG00000015093	ProperStrand	79	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-8.3759
chr9	15119647	15119737	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	chr2	166888978	166889016	snoRNA	ENSMUSG00000077515_SNORD12	.	ENSMUSG00000077515	ProperStrand	191	1	-0.8932
chr2	130979139	130979156	protein_coding	1700037H04Rik	intron	ENSMUSG00000027327	NonProperStrand	26	chr2	26494791	26494842	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-7.7912
chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	1	-6.3939
chr3	108228259	108228275	protein_coding	Sars	utr3	ENSMUSG00000068739	NonProperStrand	200	chr7	67123696	67123728	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	1	-7.1378
chr8	125626838	125627091	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	chr4	149026816	149026832	protein_coding	Pik3cd	exon	ENSMUSG00000039936	ProperStrand	151	1	-8.7613
chr1	36393764	36393809	protein_coding	4632411B12Rik	utr3	ENSMUSG00000010453	ProperStrand	24	chr3	123210854	123210914	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	4	-12.3972
chr4	130311268	130311358	protein_coding	Pum1	intron	ENSMUSG00000028580	ProperStrand	131	chr12	17552965	17553046	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-3.6087
chr13	9833568	9833653	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr7	30231467	30231539	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	4	-5.0045
chr7	20282183	20282237	protein_coding	Apoe	exon	ENSMUSG00000002985	ProperStrand	231	chr2	127610755	127610771	protein_coding	Nphp1	intron	ENSMUSG00000027378	ProperStrand	7	1	-15.0422
chr9	114505689	114519792	protein_coding	Cnot10	intron	ENSMUSG00000056167	ProperStrand	16	chr16	23110828	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-7.9620
chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	chr2	26812154	26812265	protein_coding	Rexo4	intron	ENSMUSG00000052406	ProperStrand	59	1	-8.2128
chr4	125773966	125774031	protein_coding	Lsm10	utr5	ENSMUSG00000050188	ProperStrand	12	chr2	144087335	144087413	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	7	-21.0683
chr4	131399490	131399506	protein_coding	Mecr	exon	ENSMUSG00000028910	NonProperStrand	109	chr7	67125763	67125822	snoRNA	ENSMUSG00000089375_Snord107	.	ENSMUSG00000089375	ProperStrand	451	1	-8.0803
chr14	11815936	11815957	protein_coding	Fhit	intron	ENSMUSG00000060579	ProperStrand	32	chr16	23110842	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-3.1962
chr7	19591413	19591429	protein_coding	Irf2bp1	exon	ENSMUSG00000044030	NonProperStrand	81	chr15	4962082	4962098	protein_coding	C7	utr3	ENSMUSG00000079105	ProperStrand	63	1	-12.6132
chr4	154794368	154794384	protein_coding	2010015L04Rik	utr5	ENSMUSG00000042233	ProperStrand	5	chr14	76247754	76247842	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-9.2340
chr4	53873613	53873646	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	chr3	68889027	68889188	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	5	-3.0183
chrX	68486250	68486311	protein_coding	Mtm1	exon	ENSMUSG00000031337	ProperStrand	10	chr17	35088957	35088975	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	2	-15.1697
chr1	4766697	4766785	protein_coding	Mrpl15	exon	ENSMUSG00000033845	ProperStrand	34	chr16	23111372	23111462	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.1231
chr9	23182891	23182908	protein_coding	Bmper	intron	ENSMUSG00000031963	NonProperStrand	10	chr18	75161533	75161562	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-10.8532
chr3	52388277	52388294	SINE	B4A	B4	chr3B4A52388218	ProperStrand	169	chr7	116664812	116664868	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-0.9845
chr6	115754278	115754368	protein_coding	Cand2	utr3	ENSMUSG00000030319	ProperStrand	40	chr17	24857727	24857807	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.0012
chr18	35097988	35098268	protein_coding	Hspa9	exon	ENSMUSG00000024359	ProperStrand	166	chr19	8799607	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-4.7780
chr13	54626067	54626084	protein_coding	4732471D19Rik	exon	ENSMUSG00000043183	NonProperStrand	18	chr16	23110893	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7867
chr10	127760645	127760745	protein_coding	Cnpy2	exon	ENSMUSG00000025381	ProperStrand	10	chr19	8798490	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-8.8233
chr9	114434086	114434176	protein_coding	Trim71	exon	ENSMUSG00000079259	ProperStrand	162	chr2	26493400	26493484	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-2.0042
mmu-miR-6240	4	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr6	135820109	135820125	protein_coding-noncoding	Grin2b	utr3	ENSMUSG00000030209	NonProperStrand	7	1	-10.2930
chr3	124598453	124598472	LINE	Lx9	L1	chr3Lx9124598126	NonProperStrand	2	chr5	130300419	130300477	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-9.6890
chr17	15083703	15087589	protein_coding	Phf10	exon	ENSMUSG00000023883	ProperStrand	10	chr10	23505199	23505279	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-10.8346
chr10	78503291	78503381	LINE	Lx2	L1	chr10Lx278502761	ProperStrand	1	chr10	78503580	78503660	LTR	LTRIS3	ERV1	chr10LTRIS378503480	ProperStrand	1	1	-inf
chr9	57597958	57598003	protein_coding	Edc3	utr3	ENSMUSG00000038957	ProperStrand	19	chr16	23111445	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.1411
chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	chr18	35965802	35965902	protein_coding	Ube2d2	utr3	ENSMUSG00000091896	ProperStrand	20	1	-10.9865
chr9	121552040	121562928	protein_coding	Vipr1	exon	ENSMUSG00000032528	ProperStrand	2	chr4	131908357	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-8.3123
chr14	55260023	55260041	protein_coding	Gm17606	intron	ENSMUSG00000091306	ProperStrand	3	chr4	131908808	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-inf
chr9	40105550	40105615	protein_coding	Gramd1b	utr3	ENSMUSG00000040111	ProperStrand	40	chr7	67123692	67123759	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	4	-inf
chr15	58768968	58770837	protein_coding	Ndufb9	exon	ENSMUSG00000022354	ProperStrand	13	chr7	51505236	51505267	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	1	-11.2607
chr10	94151578	94151595	protein_coding	Ccdc41	utr5	ENSMUSG00000020024	NonProperStrand	34	chr16	23111423	23111492	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.1231
chr2	103524565	103524590	protein_coding	Abtb2	intron	ENSMUSG00000032724	ProperStrand	12	chr12	55797768	55797858	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	7	-inf
chr1	94997268	94997284	protein_coding	Kif1a	intron	ENSMUSG00000014602	NonProperStrand	6	chr1	70167990	70168007	protein_coding	Spag16	intron	ENSMUSG00000053153	NonProperStrand	34	1	-18.2219
chr5	118376503	118376519	protein_coding	Nos1	exon	ENSMUSG00000029361	NonProperStrand	237	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-2.6612
chr2	127416850	127416901	protein_coding	Mrps5	intron	ENSMUSG00000027374	ProperStrand	84	chr9	15119745	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.0643
chr18	38791316	38791334	protein_coding	Arhgap26	intron	ENSMUSG00000036452	NonProperStrand	29	chr19	8963027	8963081	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.5658
chr13	112540780	112541440	protein_coding	Map3k1	exon	ENSMUSG00000021754	ProperStrand	113	chr1	95198104	95198122	protein_coding	Mterfd2	exon	ENSMUSG00000026273	ProperStrand	5	1	-17.2305
chr19	8798484	8798553	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	chr17	35299505	35299642	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	11	-2.1477
chr8	98269959	98270084	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	chr2	144087350	144087463	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	11	-10.4357
chr16	4714480	4714570	protein_coding	Nmral1	exon	ENSMUSG00000063445	ProperStrand	10	chr7	116664792	116664872	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-5.9693
chr6	125003978	125004026	protein_coding	Acrbp	utr3	ENSMUSG00000072770	ProperStrand	4	chr9	15119639	15119729	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	4	-inf
chr14	34580434	34580524	SINE	B3	B2	chr14B334580407	ProperStrand	1	chr5	140649409	140649499	protein_coding	Mad1l1	intron	ENSMUSG00000029554	NonProperStrand	6	1	-inf
chr12	21306074	21307362	protein_coding	Cpsf3	exon	ENSMUSG00000054309	ProperStrand	24	chr10	23505167	23505266	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-4.7395
chr8	109892760	109892850	protein_coding	Nfat5	exon	ENSMUSG00000003847	ProperStrand	29	chr12	106269294	106269374	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-5.5475
chr8	113366285	113366334	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	chr17	35087940	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-1.5385
chr17	81344133	81344150	protein_coding	Tmem178	exon	ENSMUSG00000024245	ProperStrand	67	chr1	162965531	162965565	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.0769
chr11	50109646	50109746	protein_coding	Canx	utr3	ENSMUSG00000020368	ProperStrand	296	chrX	5684091	5684132	rRNA	n-R5s2	.	ENSMUSG00000075918	ProperStrand	25	1	-11.8859
chr8	32986974	32986993	protein_coding	Nrg1	intron	ENSMUSG00000062991	NonProperStrand	6	chr10	90581241	90581282	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-9.4975
chr11	84185042	84185086	protein_coding	Acaca	exon	ENSMUSG00000020532	ProperStrand	100	chr5	53499032	53499050	protein_coding	Sel1l3	utr3	ENSMUSG00000029189	ProperStrand	5	1	-17.4350
chr5	30387198	30387278	protein_coding	Tyms	utr3	ENSMUSG00000025747	ProperStrand	8	chr7	54441935	54442025	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	1	-15.7014
chr6	34259609	34259992	protein_coding	Akr1b3	exon	ENSMUSG00000001642	ProperStrand	71	chr16	32644909	32644999	protein_coding	Tnk2	utr5	ENSMUSG00000022791	ProperStrand	86	1	-12.2512
chr17	56565299	56565833	protein_coding	Ptprs	exon	ENSMUSG00000013236	ProperStrand	152	chr13	55105923	55105939	protein_coding	Unc5a	exon	ENSMUSG00000025876	NonProperStrand	96	1	-10.5035
chr9	39882020	39882036	protein_coding	Olfr982	exon	ENSMUSG00000049010	NonProperStrand	35	chr7	117190017	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.3417
chr17	10409167	10409225	protein_coding	Qk	exon	ENSMUSG00000062078	ProperStrand	63	chr7	116663686	116663710	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-4.2985
chr2	24825186	24827046	protein_coding	Wdr85	exon	ENSMUSG00000026975	ProperStrand	323	chr15	82980192	82980224	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-3.8765
chr10	75359822	75360194	protein_coding	Smarcb1	exon	ENSMUSG00000000902	ProperStrand	109	chr5	108334195	108334237	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-3.6901
chr1	127331406	127331423	protein_coding	Actr3	intron	ENSMUSG00000026341	NonProperStrand	4	chr4	131865413	131865503	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-9.5621
chr2	142897272	142897357	protein_coding	Snrpb2	utr3	ENSMUSG00000008333	ProperStrand	11	chr10	23505152	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.1476
chr2	29859202	29863024	protein_coding	Spna2	exon	ENSMUSG00000057738	ProperStrand	222	chr10	23506278	23506321	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	2	-7.3164
chr4	40931965	40932034	protein_coding	Nfx1	exon	ENSMUSG00000028423	ProperStrand	39	chr5	23825941	23825957	protein_coding	Kcnh2	exon	ENSMUSG00000038319	ProperStrand	242	1	-11.3858
chr8	86514869	86518753	protein_coding	Prkaca	exon	ENSMUSG00000005469	ProperStrand	17	chr1	162966189	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-10.1266
chr7	148072455	148072948	protein_coding	Psmd13	exon	ENSMUSG00000025487	ProperStrand	16	chr16	23111764	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	5	-17.8161
chr5	130075660	130076411	protein_coding	Sfswap	exon	ENSMUSG00000029439	ProperStrand	34	chr8	73419676	73419756	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.1854
chr8	75687960	75687979	protein_coding	Large	intron	ENSMUSG00000004383	NonProperStrand	16	chr3	157729963	157729979	protein_coding	Lrrc40	utr3	ENSMUSG00000063052	ProperStrand	147	1	-14.2053
chr10	51984513	51984557	protein_coding	Dcbld1	intron	ENSMUSG00000019891	ProperStrand	21	chr1	72272871	72272961	snRNA	ENSMUSG00000075752_U2	.	ENSMUSG00000075752	ProperStrand	535	3	-inf
chr3	84301369	84301398	protein_coding	Arfip1	utr3	ENSMUSG00000074513	ProperStrand	49	chr4	131908816	131908871	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.5109
chr11	116535462	116535532	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr14	48296365	48296439	protein_coding	Ktn1	exon	ENSMUSG00000021843	ProperStrand	64	1	-5.7839
chr7	20310054	20310070	protein_coding	Pvrl2	exon	ENSMUSG00000062300	ProperStrand	110	chr11	106362327	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-4.6658
chr18	10052133	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr19	11015616	11015632	protein_coding	Gpr44	exon	ENSMUSG00000034117	NonProperStrand	118	1	-7.4513
chr6	39349165	39355900	protein_coding	Mkrn1	exon	ENSMUSG00000029922	ProperStrand	177	chr16	23110834	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	9	-1.6412
chr1	181320402	181320420	protein_coding	Smyd3	intron	ENSMUSG00000055067	NonProperStrand	190	chr7	117166720	117166806	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-2.6882
chrX	72214248	72214264	protein_coding-noncoding	Gab3	utr3	ENSMUSG00000032750	ProperStrand	420	chr6	128323750	128323786	protein_coding	Foxm1	exon	ENSMUSG00000001517	ProperStrand	31	1	-10.7487
chr9	78023130	78023210	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr10	95011768	95011858	protein_coding	Nudt4	utr3	ENSMUSG00000020029	ProperStrand	32	1	-7.1260
chr4	116862587	116862662	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	chr17	35088971	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	2	-3.2898
chr13	109461452	109461579	protein_coding	Gm9000	exon	ENSMUSG00000059751	ProperStrand	25	chr5	121655128	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.4318
chr3	153574629	153575109	protein_coding	Rabggtb	intron	ENSMUSG00000038975	ProperStrand	667	chr13	51743569	51743662	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	2	-4.1354
chr5	122916073	122916919	protein_coding	Atp2a2	exon	ENSMUSG00000029467	ProperStrand	166	chr17	35089181	35089249	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-3.5490
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr4	130305549	130305619	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	1	-3.1342
chr5	122580412	122584741	protein_coding	Ccdc63	utr5	ENSMUSG00000043036	ProperStrand	120	chr9	15119651	15119679	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.5126
chr2	179960492	179960509	protein_coding	Lama5	utr5	ENSMUSG00000015647	ProperStrand	365	chr1	162967489	162967517	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-0.6995
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr10	39978350	39978478	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	5	-5.3689
chr17	32366615	32366662	protein_coding	Brd4	utr5	ENSMUSG00000024002	ProperStrand	121	chr17	24857728	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	5	-7.1164
chr9	21158835	21158857	protein_coding	Slc44a2	utr3	ENSMUSG00000057193	ProperStrand	26	chr8	73419663	73419774	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-11.2810
chr4	107868749	107868849	protein_coding	Zyg11a	exon	ENSMUSG00000034645	ProperStrand	19	chr16	23110924	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-9.4108
chr16	57391761	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr7	140901079	140901198	protein_coding	Bccip	exon	ENSMUSG00000030983	ProperStrand	19	1	-10.1169
chr3	106909227	106909243	protein_coding	Kcna2	utr3	ENSMUSG00000040724	ProperStrand	17	chr19	8798744	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	4	-20.3550
chr1	42755254	42755270	protein_coding	Pou3f3	exon	ENSMUSG00000045515	NonProperStrand	117	chr14	31827479	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-5.6291
chr18	61536361	61536394	protein_coding	Ppargc1b	intron	ENSMUSG00000033871	ProperStrand	5	chr10	23505152	23505217	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-9.7958
chr2	26495592	26495618	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr14	52829508	52829570	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	3	-4.5127
chr4	130168894	130168981	protein_coding	Nkain1	utr3	ENSMUSG00000078532	ProperStrand	45	chr11	97642972	97643062	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.9748
chrX	6814801	6814891	miRNA	Mir500	.	ENSMUSG00000070108	NonProperStrand	1	chrX	6814673	6814763	protein_coding	Clcn5	intron	ENSMUSG00000004317	NonProperStrand	7	1	-inf
chr11	14961829	14961849	LINE	Lx	L1	chr11Lx14961726	ProperStrand	93	chr12	17552947	17552993	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	2	-7.0972
chr8	90867533	90867565	protein_coding	Brd7	exon	ENSMUSG00000031660	ProperStrand	10	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-10.6306
chr9	120038020	120038097	protein_coding	Rpsa	intron	ENSMUSG00000032518	ProperStrand	398	chr12	17552969	17553069	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-1.7108
chr19	23744788	23744878	LINE	Lx6	L1	chr19Lx623744527	NonProperStrand	1	chr19	23745103	23745183	LTR	MTA_Mm	MaLR	chr19MTA_Mm23744983	NonProperStrand	1	1	-inf
chr10	31896605	31896685	LINE	L1Md_T	L1	chr10L1Md_T31895791	NonProperStrand	1	chr7	54442369	54442459	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	1	-inf
chr2	121255233	121255258	protein_coding	Pdia3	exon	ENSMUSG00000027248	ProperStrand	74	chr1	88247741	88247799	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-4.6921
chr10	80641594	80641612	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr2	158185528	158185666	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	3	-1.8001
chr1	83115551	83115568	protein_coding	Ccl20	utr3	ENSMUSG00000026166	ProperStrand	1	chr8	129468826	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-inf
chr6	55029272	55029362	protein_coding	Gars	utr3	ENSMUSG00000029777	ProperStrand	71	chr11	116938557	116938637	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-5.8280
chr15	73041264	73041318	protein_coding	Ptk2	utr3	ENSMUSG00000022607	ProperStrand	31	chr16	23110916	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-3.2978
chr12	88488443	88496424	protein_coding	Pomt2	exon	ENSMUSG00000034126	NonProperStrand	331	chr17	27559700	27559717	protein_coding	Grm4	utr3	ENSMUSG00000063239	ProperStrand	147	1	-8.0991
chr9	30475299	30475379	LINE	Lx7	L1	chr9Lx730474942	ProperStrand	1	chr9	30475430	30475520	SINE	B1_Mus1	Alu	chr9B1_Mus130475363	ProperStrand	1	1	-inf
chr5	130101381	130101410	protein_coding	Mmp17	exon	ENSMUSG00000029436	ProperStrand	17	chr17	35088971	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	3	-18.8977
chr11	35728583	35728599	protein_coding	Wwc1	intron	ENSMUSG00000018849	NonProperStrand	6	chr15	102321064	102321178	protein_coding	Pcbp2	exon	ENSMUSG00000056851	ProperStrand	164	1	-16.0451
chr7	108875501	108875520	protein_coding	Clpb	intron	ENSMUSG00000001829	ProperStrand	44	chr17	39985565	39985653	pseudogene	AY036118	.	ENSMUSG00000045999	ProperStrand	57	2	-19.6006
chr6	28836537	28836609	protein_coding	Snd1	exon	ENSMUSG00000001424	ProperStrand	210	chr8	73419656	73419729	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-1.1303
chr9	63868722	63868739	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	chr4	11490612	11497011	protein_coding	Rad54b	exon	ENSMUSG00000078773	ProperStrand	22	1	-10.6148
chr1	185857228	185857244	protein_coding	1700056E22Rik	exon	ENSMUSG00000044854	ProperStrand	173	chr1	88247816	88247835	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-3.1106
chr2	90235285	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	71564227	71564244	protein_coding	Cgnl1	exon	ENSMUSG00000032232	ProperStrand	46	1	-4.9744
chr5	42183095	42183111	protein_coding	Bod1l	exon	ENSMUSG00000061755	NonProperStrand	8	chr16	23110454	23110508	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-6.3329
chr11	76377689	76377779	protein_coding	Abr	intron	ENSMUSG00000017631	NonProperStrand	8	chr11	76976019	76976099	protein_coding	Efcab5	intron	ENSMUSG00000050944	ProperStrand	4	1	-19.5686
chr14	54887916	54888016	protein_coding	Abhd4	utr3	ENSMUSG00000040997	ProperStrand	21	chr16	23110506	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.3878
chr7	134731424	134731440	protein_coding	Gm166	exon	ENSMUSG00000057176	ProperStrand	22	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	2	-11.6000
chr11	69219414	69219477	protein_coding	Kdm6b	exon	ENSMUSG00000018476	ProperStrand	76	chr19	8963082	8963172	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.8903
chr7	54442948	54443028	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	chr10	128676031	128676121	protein_coding	Olfr774	exon	ENSMUSG00000072403	NonProperStrand	3	1	-16.1366
chr9	65550751	65550815	protein_coding	Zfp609	exon	ENSMUSG00000040524	ProperStrand	87	chr2	158185541	158185631	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-5.7545
chr11	115200753	115200770	protein_coding	Otop3	exon	ENSMUSG00000018862	ProperStrand	59	chr6	29374415	29374468	protein_coding	Ccdc136	intron	ENSMUSG00000029769	ProperStrand	19	1	-15.6671
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr12	17552949	17553038	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	3	-2.8983
chr5	90714526	90714616	protein_coding	Ankrd17	exon	ENSMUSG00000055204	ProperStrand	77	chr17	24857741	24857821	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.8904
chr16	38228518	38228571	protein_coding	Gsk3b	intron	ENSMUSG00000022812	ProperStrand	80	chr1	74533235	74533341	protein_coding	Usp37	exon	ENSMUSG00000033364	ProperStrand	47	1	-13.2300
chr5	34217098	34217169	protein_coding	Whsc1	utr3	ENSMUSG00000057406	ProperStrand	409	chr1	173221218	173221293	protein_coding	Ufc1	intron	ENSMUSG00000062963	ProperStrand	8	1	-13.6058
chr17	71413945	71413962	protein_coding	Myom1	exon	ENSMUSG00000024049	ProperStrand	4	chr2	26768368	26768389	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-11.2331
chr1	120731125	120731179	protein_coding	Gli2	utr3	ENSMUSG00000048402	ProperStrand	148	chr5	108334195	108334251	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-3.1325
chr6	120836893	120836949	protein_coding	Bcl2l13	exon	ENSMUSG00000009112	ProperStrand	18	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-10.5959
chr16	11144306	11144406	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr5	122268565	122268644	protein_coding	Sh2b3	exon	ENSMUSG00000042594	NonProperStrand	4	1	-16.1306
chr1	120574395	120574452	protein_coding	Tfcp2l1	utr3	ENSMUSG00000026380	ProperStrand	158	chr4	124736326	124736344	protein_coding	Dnali1	exon	ENSMUSG00000042707	ProperStrand	45	1	-11.9502
chr11	120549876	120550267	protein_coding	Aspscr1	exon	ENSMUSG00000025142	ProperStrand	53	chr1	162965536	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.5033
chr8	24523591	24523630	protein_coding	Sfrp1	intron	ENSMUSG00000031548	ProperStrand	22	chr2	32818840	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-7.4669
chr15	81937523	81937539	protein_coding	Mei1	exon	ENSMUSG00000068117	ProperStrand	53	chr8	73419657	73419739	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.3555
chr17	32957268	32957284	lincRNA	Gm16684	intron	ENSMUSG00000085948	ProperStrand	43	chr13	19684241	19684258	protein_coding	Epdr1	utr3	ENSMUSG00000002808	ProperStrand	46	1	-14.5291
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chrX	7174686	7174702	protein_coding	Ccdc22	exon	ENSMUSG00000031143	NonProperStrand	51	1	-6.2240
chr3	150566642	150566658	LTR	RMER20B	ERVK	chr3RMER20B150566605	ProperStrand	5	chr4	131865855	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-6.5022
chr11	78026875	78026925	protein_coding	Supt6h	exon	ENSMUSG00000002052	ProperStrand	119	chr9	107673007	107673024	protein_coding	Rbm5	intron	ENSMUSG00000032580	NonProperStrand	38	1	-12.8595
chr16	15134344	15134424	LTR	MLT1E	MaLR	chr16MLT1E15134349	NonProperStrand	1	chr16	15134200	15134290	LTR	RMER13B	ERVK	chr16RMER13B15133885	NonProperStrand	1	1	-inf
chr13	45015184	45015255	protein_coding	Jarid2	exon	ENSMUSG00000038518	ProperStrand	372	chr1	162965981	162966044	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	11	-16.0538
chr11	97642949	97643090	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	chr3	68889024	68889369	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	83	-0.9910
chr7	136800631	136800649	SINE	RSINE1	B4	chr7RSINE1136800606	ProperStrand	216	chr5	121655015	121655086	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	3	-4.5147
chr12	16901934	16902013	protein_coding	Rock2	utr5	ENSMUSG00000020580	ProperStrand	27	chr6	71832550	71832577	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-7.1966
chr6	38384214	38384231	protein_coding	Ubn2	exon	ENSMUSG00000038538	ProperStrand	86	chr7	29136525	29136576	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.7809
chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	chrX	84483704	84483751	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-4.2959
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr10	79798922	79798954	protein_coding	Reep6	utr3	ENSMUSG00000035504	ProperStrand	3	2	-inf
chr1	194571836	194571869	snRNA	ENSMUSG00000064881_U5	.	ENSMUSG00000064881	ProperStrand	187	chr8	129468746	129468868	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-2.3557
chr14	35577342	35577432	lincRNA	A930038B10Rik	intron	ENSMUSG00000085825	ProperStrand	2	chr10	90581059	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-12.1998
chr9	20879602	20885282	protein_coding	Raver1	utr3	ENSMUSG00000010205	ProperStrand	69	chr10	23505152	23505266	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-6.5038
chr4	106770704	106770721	protein_coding	Cdcp2	intron	ENSMUSG00000047636	NonProperStrand	35	chr11	62416951	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-7.1137
chr17	25282560	25283277	protein_coding	Clcn7	exon	ENSMUSG00000036636	ProperStrand	94	chr1	155307844	155307872	protein_coding	Dhx9	intron	ENSMUSG00000042699	ProperStrand	98	1	-11.4249
chrX	71589885	71589903	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr7	148634722	148634837	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	4	-5.6018
chr9	15119307	15119397	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	chr2	144087333	144087413	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	6	-2.8214
chr7	148805421	148805521	protein_coding	Ap2a2	exon	ENSMUSG00000002957	ProperStrand	76	chr7	52381972	52382015	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-6.2445
chr17	49236467	49236484	protein_coding	Lrfn2	exon	ENSMUSG00000040490	NonProperStrand	9	chr9	120039567	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-7.0468
chr13	108545651	108545673	protein_coding	Zswim6	intron	ENSMUSG00000032846	NonProperStrand	19	chr10	120825193	120825253	protein_coding	Gns	exon	ENSMUSG00000034707	ProperStrand	19	2	-20.0613
chr8	125626932	125626987	snoRNA	ENSMUSG00000064450_Snord68	.	ENSMUSG00000064450	ProperStrand	181	chr11	97642952	97642972	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-0.8480
chr19	41187303	41187321	protein_coding	Tll2	intron	ENSMUSG00000025013	NonProperStrand	4	chr14	76247711	76247768	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-9.7427
chr5	147602435	147602473	protein_coding	Usp12	intron	ENSMUSG00000029640	ProperStrand	39	chr7	29136585	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.1194
chr3	84652629	84652689	protein_coding	Fbxw7	intron	ENSMUSG00000028086	ProperStrand	11	chr4	131908357	131908416	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.3989
chr4	77511774	77511864	protein_coding	Ptprd	intron	ENSMUSG00000028399	NonProperStrand	29	chr4	97413803	97413894	protein_coding	E130114P18Rik	intron	ENSMUSG00000048747	NonProperStrand	4	1	-inf
chr15	85693099	85694572	protein_coding	Gtse1	exon	ENSMUSG00000022385	ProperStrand	74	chrX	130496426	130496668	protein_coding	Sytl4	exon	ENSMUSG00000031255	ProperStrand	169	1	-10.8138
chr5	147647198	147647457	protein_coding	Rpl21	exon	ENSMUSG00000041453	ProperStrand	112	chr4	131908684	131908745	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-1.1147
chr7	148254105	148254205	protein_coding	B4galnt4	exon	ENSMUSG00000055629	ProperStrand	11	chr4	3762227	3762260	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	1	-12.9521
chr19	42026957	42027002	protein_coding	Mms19	exon	ENSMUSG00000025159	ProperStrand	52	chr3	96303427	96303474	tRNA	tRNA748-LysCTT	.	400072	ProperStrand	15	3	-inf
chr8	73202408	73202500	protein_coding	Lsm4	utr3	ENSMUSG00000031848	ProperStrand	19	chr14	79826476	79826493	protein_coding	Kbtbd7	utr5	ENSMUSG00000043881	ProperStrand	3	2	-inf
chr4	133559820	133559911	protein_coding	Lin28a	utr3	ENSMUSG00000050966	ProperStrand	55	chr11	62416631	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-5.3357
chr14	66211783	66211801	protein_coding	Elp3	exon	ENSMUSG00000022031	ProperStrand	71	chr3	123210857	123210878	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.7983
chr11	116535914	116535982	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr8	59992774	59992874	protein_coding	Hmgb2	exon	ENSMUSG00000054717	ProperStrand	184	1	-3.7616
chr8	125014792	125014840	protein_coding	Fam38a	exon	ENSMUSG00000014444	ProperStrand	132	chr1	162965551	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.9248
chr2	180356351	180356367	protein_coding	Col9a3	utr3	ENSMUSG00000027570	ProperStrand	5	chr16	23111447	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-14.5684
chr19	3602388	3602405	protein_coding	Lrp5	exon	ENSMUSG00000024913	ProperStrand	145	chr2	158185616	158185666	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-4.7644
chr10	127520414	127520949	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr2	26768412	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	2	-2.7442
chr17	24559180	24559215	protein_coding	Rnps1	exon	ENSMUSG00000034681	ProperStrand	40	chr2	26493421	26493466	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	3	-10.8311
chr4	131399490	131399506	protein_coding	Mecr	exon	ENSMUSG00000028910	NonProperStrand	109	chr12	110923181	110923231	snoRNA	ENSMUSG00000084487_SNORD113	.	ENSMUSG00000084487	ProperStrand	183	2	-15.5898
chr19	42134681	42134708	protein_coding	Hoga1	exon	ENSMUSG00000025176	ProperStrand	2	chr7	52382237	52382275	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-15.7512
chr8	114532248	114532264	protein_coding	Kars	utr5	ENSMUSG00000031948	NonProperStrand	2	chr9	120038468	120038544	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-10.2959
chr11	103222183	103223551	antisense	Gm11647	.	ENSMUSG00000085360	ProperStrand	22	chr11	103223577	103224601	protein_coding	Arhgap27	utr5	ENSMUSG00000034255	NonProperStrand	2	1	-inf
chr11	67181530	67181547	protein_coding	Myh13	intron	ENSMUSG00000060180	NonProperStrand	1	chr5	74489573	74489643	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-inf
chr11	62416627	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	chr11	98878374	98878454	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	5	-1.6929
chr15	76735272	76735362	protein_coding	Rpl8	exon	ENSMUSG00000003970	ProperStrand	191	chr5	108336392	108336472	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-2.7379
chr11	6520321	6520440	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	chr7	116664819	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	11	-2.4776
chr3	53268082	53268115	protein_coding	2810046L04Rik	utr5	ENSMUSG00000049504	ProperStrand	15	chr19	8798754	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-7.5588
chr1	155086534	155087519	protein_coding	Lamc1	exon	ENSMUSG00000026478	ProperStrand	239	chr6	115757998	115758088	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-2.8810
chr8	9696983	9697002	protein_coding	Fam155a	intron	ENSMUSG00000079157	NonProperStrand	10	chr11	77995189	77995235	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-9.8181
chr6	145519478	145519497	protein_coding	Ifltd1	intron	ENSMUSG00000054966	ProperStrand	12	chr12	29316511	29316552	protein_coding	Rps7	exon	ENSMUSG00000061477	ProperStrand	129	1	-15.0683
chr8	86664709	86664994	protein_coding	Cc2d1a	exon	ENSMUSG00000036686	ProperStrand	18	chr17	35299507	35299614	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-7.1621
chr7	17501629	17501711	protein_coding	Calm3	utr3	ENSMUSG00000019370	ProperStrand	28	chr4	131865856	131865946	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.0580
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr5	89383967	89663855	protein_coding	Slc4a4	exon	ENSMUSG00000060961	NonProperStrand	195	3	-8.9787
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr6	115542305	115542322	protein_coding	2510049J12Rik	exon	ENSMUSG00000068011	NonProperStrand	4	1	-13.4066
chr2	130103751	130103825	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	chr5	130300454	130300554	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	5	-0.8230
chr13	19684241	19684257	protein_coding	Epdr1	utr3	ENSMUSG00000002808	ProperStrand	46	chr5	37187605	37187621	protein_coding	Mrfap1	exon	ENSMUSG00000055302	ProperStrand	62	1	-13.7886
chr7	75149239	75309966	protein_coding	Igf1r	exon	ENSMUSG00000005533	ProperStrand	121	chr4	131865856	131865936	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-2.7406
chr16	93808086	93808130	protein_coding	Dopey2	exon	ENSMUSG00000022946	ProperStrand	22	chr1	187066846	187066918	snoRNA	ENSMUSG00000077571_Snora36b	.	ENSMUSG00000077571	ProperStrand	244	2	-20.0669
chr11	80080114	80080131	protein_coding	Rhot1	utr3	ENSMUSG00000017686	NonProperStrand	48	chr12	9015411	9015466	protein_coding	Wdr35	exon	ENSMUSG00000066643	ProperStrand	10	1	-17.2941
chr15	74392750	74392768	protein_coding	Bai1	intron	ENSMUSG00000034730	NonProperStrand	56	chr10	107800731	107800851	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	1	-8.2086
chrX	70931846	70931881	protein_coding	Bcap31	utr3	ENSMUSG00000002015	ProperStrand	21	chrX	148357382	148358028	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	2	-17.4786
chr1	181027187	181027205	protein_coding	Smyd3	intron	ENSMUSG00000055067	ProperStrand	231	chr2	32818883	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-2.9399
chr13	101484637	101484727	protein_coding	Cdk7	intron	ENSMUSG00000069089	ProperStrand	12	chr5	130300442	130300522	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-5.5517
chr17	25996060	25996076	protein_coding	Wdr90	exon	ENSMUSG00000073434	ProperStrand	91	chr11	6428108	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.4602
chr18	51449511	51449527	protein_coding	Prr16	intron	ENSMUSG00000073565	ProperStrand	16	chr16	23111372	23111448	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.4608
chr7	150717298	150717378	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	chr9	40612076	40612152	snoRNA	ENSMUSG00000075924_Snord14d	.	ENSMUSG00000075924	ProperStrand	131	1	-4.0089
chr10	43382490	43382506	SINE	B4	B4	chr10B443382431	ProperStrand	4	chr4	131908833	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-6.2660
chr2	146125208	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	chr4	116827121	116827152	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	3	-11.4392
chr8	40681587	40681603	protein_coding	Msr1	intron	ENSMUSG00000025044	ProperStrand	138	chr1	88252838	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-5.0099
chr2	144489775	144489791	protein_coding	Dtd1	intron	ENSMUSG00000027430	NonProperStrand	10	chr8	63828407	63832539	protein_coding	Sh3rf1	exon	ENSMUSG00000031642	ProperStrand	50	1	-17.2928
chr8	87369789	87369849	protein_coding	Calr	exon	ENSMUSG00000003814	ProperStrand	232	chr11	62418049	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-3.0110
chr1	57425979	57425997	lincRNA	4930558J18Rik	intron	ENSMUSG00000084958	NonProperStrand	28	chr4	131908811	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.4067
chrX	112019055	112019073	protein_coding	Ube2dnl	exon	ENSMUSG00000050435	ProperStrand	2	chr15	98350174	98350268	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	2	-inf
chr11	4956158	4956174	protein_coding	Gas2l1	utr3	ENSMUSG00000034201	ProperStrand	33	chr15	79913305	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.7259
mmu-miR-6238	1	20	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr9	103950068	103950086	protein_coding	Uba5	intron	ENSMUSG00000032557	ProperStrand	111	1	-9.2998
chr5	123318173	123318201	protein_coding	Rnf34	exon	ENSMUSG00000029474	ProperStrand	15	chr7	116663730	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-5.1056
chr9	119547663	119547682	protein_coding	Scn10a	exon	ENSMUSG00000034533	NonProperStrand	1	chr13	21872379	21872419	protein_coding	Hist1h1b	exon	ENSMUSG00000058773	ProperStrand	65	1	-inf
chr16	3856858	3856877	protein_coding	Zfp174	utr3	ENSMUSG00000054939	NonProperStrand	166	chr7	116663690	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-0.9798
chr9	59504451	59519394	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr18	33954837	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	7	-1.4656
chr7	138985639	138985656	protein_coding	Fgfr2	intron	ENSMUSG00000030849	NonProperStrand	95	chr6	131330290	131330390	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	ProperStrand	408	1	-8.5537
chr16	57391626	57391706	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr18	35714142	35714242	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	NonProperStrand	47	1	-10.7977
chr8	11612310	11613378	protein_coding	Ankrd10	utr3	ENSMUSG00000031508	ProperStrand	32	chr16	23110861	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.9468
chr18	12307432	12307532	protein_coding	Riok3	intron	ENSMUSG00000024404	ProperStrand	38	chr3	123210854	123210894	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.8448
chr10	120709244	120712786	protein_coding	Tbc1d30	exon	ENSMUSG00000052302	ProperStrand	233	chr17	35089229	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-2.9378
chr7	52965829	52965871	protein_coding	Sphk2	utr3	ENSMUSG00000057342	ProperStrand	10	chr16	23111442	23111500	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-10.9079
chr4	32888680	32888767	DNA	URR1A	MER1_type	chr4URR1A32888681	ProperStrand	1	chr5	23877781	23877948	protein_coding	Nos3	exon	ENSMUSG00000028978	ProperStrand	13	1	-inf
chr1	4882105	4883542	protein_coding	Tcea1	exon	ENSMUSG00000033813	ProperStrand	24	chr8	129468799	129468879	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-6.2064
chr19	5364894	5365014	protein_coding	Banf1	utr3	ENSMUSG00000024844	ProperStrand	34	chrX	113862540	113862570	snoRNA	ENSMUSG00000088518_SNORA9	.	ENSMUSG00000088518	ProperStrand	280	1	-11.3721
chr18	3528266	3528346	LINE	L1_Mus2	L1	chr18L1_Mus23523925	ProperStrand	1	chrX	31938492	31938582	LTR	RLTR26	ERVK	chrXRLTR2631938507	ProperStrand	1	1	-inf
chr4	55024085	55024124	protein_coding	Zfp462	exon	ENSMUSG00000060206	ProperStrand	37	chr11	97642952	97643005	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.3294
chr1	174414556	174414637	protein_coding	Igsf9	utr5	ENSMUSG00000037995	ProperStrand	13	chr2	130102054	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	4	-19.4078
chr2	120167765	120168981	protein_coding	Vps39	exon	ENSMUSG00000027291	ProperStrand	24	chr4	116826699	116826765	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-8.6204
chr11	68412079	68412159	SINE	B1_Mur2	Alu	chr11B1_Mur268412037	ProperStrand	1	chr2	69360768	69360858	protein_coding	Lrp2	intron	ENSMUSG00000027070	ProperStrand	35	1	-inf
chr4	63040396	63040925	protein_coding	Akna	exon	ENSMUSG00000039158	ProperStrand	8	chr9	81949791	81949813	protein_coding	Mei4	intron	ENSMUSG00000043289	NonProperStrand	42	1	-17.8767
chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	chr1	55135227	55135396	protein_coding	Hspd1	exon	ENSMUSG00000025980	ProperStrand	140	2	-13.9301
chr16	4545265	4545281	protein_coding	Tfap4	utr3	ENSMUSG00000005718	NonProperStrand	3	chr6	124665248	124665264	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	1	-13.2862
chr9	78326547	78327801	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr19	8799831	8799897	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	4	-0.9146
chr6	117874507	117874523	protein_coding	Hnrnpf	exon	ENSMUSG00000042079	ProperStrand	147	chr4	131908688	131908793	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-1.2959
chr5	75473198	75473215	protein_coding	Gsx2	utr3	ENSMUSG00000035946	ProperStrand	307	chr18	35714144	35714246	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-0.8734
chr6	124762922	124764106	protein_coding	Tpi1	exon	ENSMUSG00000023456	ProperStrand	94	chr11	97643010	97643090	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.7410
chr8	126554823	126554889	protein_coding	Urb2	exon	ENSMUSG00000031976	ProperStrand	64	chr3	108357307	108357407	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-4.4167
chr5	117833419	117833509	protein_coding	Rfc5	exon	ENSMUSG00000029363	ProperStrand	15	chr7	116664796	116664876	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	4	-16.4081
chr4	78742378	78742399	LTR	RLTR22_Mus	ERVK	chr4RLTR22_Mus78740941	ProperStrand	1	chr11	6428060	6428157	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-inf
chr7	19609778	19638790	protein_coding	Sympk	exon	ENSMUSG00000023118	ProperStrand	43	chr16	23110844	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-2.3110
chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	chr15	98918019	98918036	protein_coding	C1ql4	exon	ENSMUSG00000001076	NonProperStrand	2	1	-16.7908
chr8	72976048	72976131	protein_coding	Klhl26	exon	ENSMUSG00000055707	ProperStrand	3	chr5	130300532	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-8.5956
chr9	123035003	123035050	protein_coding	Exosc7	intron	ENSMUSG00000025785	ProperStrand	17	chr1	162966007	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-6.0488
chr3	96132424	96132514	snRNA	ENSMUSG00000075978_U1	.	ENSMUSG00000075978	ProperStrand	132	chr5	121655017	121655097	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.3446
chr5	135707554	135707570	protein_coding	Baz1b	exon	ENSMUSG00000002748	ProperStrand	83	chr9	15119968	15119995	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-6.6092
chr11	97889700	97889772	protein_coding	Rpl19	exon	ENSMUSG00000017404	ProperStrand	120	chr1	168239525	168239541	protein_coding	Ildr2	exon	ENSMUSG00000040612	ProperStrand	103	2	-17.0715
mmu-miR-1949	2	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr8	109187760	109187860	protein_coding	Cdh1	exon	ENSMUSG00000000303	ProperStrand	283	1	-5.0936
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr6	125046242	125047155	protein_coding	Chd4	utr5	ENSMUSG00000063870	ProperStrand	303	1	-5.6970
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr4	154630631	154630770	protein_coding	2610002J02Rik	utr3	ENSMUSG00000073684	ProperStrand	18	1	-8.7894
chr17	13170442	13170532	protein_coding	Wtap	intron	ENSMUSG00000060475	ProperStrand	119	chr19	8800377	8800457	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	5	-10.9787
chr6	47903624	47903641	pseudogene	Zfp783	.	ENSMUSG00000072653	NonProperStrand	6	chr7	52382753	52382832	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-11.4921
chr9	44728707	44728737	protein_coding	Atp5l	exon	ENSMUSG00000038717	ProperStrand	10	chr4	131908752	131908852	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.3231
chr11	105001866	105001956	SINE	B1_Mm	Alu	chr11B1_Mm105001833	ProperStrand	2	chr8	113189329	113189419	protein_coding	Vac14	intron	ENSMUSG00000010936	ProperStrand	27	1	-21.0126
chr18	58038239	58038256	Low_complexity	GC_rich	Low_complexity	chr18GC_rich58038231	NonProperStrand	2	chr5	144753420	144753453	protein_coding	Ccz1	exon	ENSMUSG00000029617	ProperStrand	10	1	-inf
chrX	148311411	148313276	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	chrX	163645401	163645457	protein_coding	Tmsb4x	utr3	ENSMUSG00000049775	ProperStrand	11	1	-12.5276
chr7	134678383	134678473	protein_coding	Srcap	exon	ENSMUSG00000053877	ProperStrand	69	chr9	120037910	120037990	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-4.4381
chr7	31098945	31098961	protein_coding	Alkbh6	exon	ENSMUSG00000042831	NonProperStrand	22	chr2	22444270	22444311	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-9.8003
chr12	112813068	112813158	protein_coding	Mark3	utr5	ENSMUSG00000007411	ProperStrand	37	chr16	23110456	23110536	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.3186
chr11	62416573	62416600	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr16	56035865	56035964	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	3	-11.0831
chr11	44344784	44344803	protein_coding	Rnf145	exon	ENSMUSG00000019189	ProperStrand	46	chr16	23111756	23111837	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.3385
chr9	118765893	118765914	protein_coding	Itga9	intron	ENSMUSG00000039115	NonProperStrand	11	chr4	116826708	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-10.2263
chr4	123062744	123062761	protein_coding	Macf1	exon	ENSMUSG00000028649	ProperStrand	320	chr7	30806447	30806507	protein_coding	Zfp568	intron	ENSMUSG00000074221	ProperStrand	110	1	-8.7445
chr6	128322002	128322018	protein_coding	Foxm1	exon	ENSMUSG00000001517	NonProperStrand	66	chr2	157105061	157109325	protein_coding	4922505G16Rik	utr5	ENSMUSG00000074627	ProperStrand	12	1	-16.3943
chr10	41405759	41405789	protein_coding	Ccdc162	intron	ENSMUSG00000075225	ProperStrand	6	chr16	23111438	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-5.4240
chr2	4974190	4974207	protein_coding	Optn	exon	ENSMUSG00000026672	ProperStrand	451	chr8	13416895	13416916	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-2.6505
chr12	120476414	120476430	protein_coding	Itgb8	utr5	ENSMUSG00000025321	NonProperStrand	3	chr1	141374198	141374215	protein_coding	Aspm	exon	ENSMUSG00000033952	NonProperStrand	1	1	-inf
chr10	118643781	118645084	protein_coding	Cand1	exon	ENSMUSG00000020114	ProperStrand	76	chr2	26494735	26494756	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.6885
chr10	116659334	116661364	protein_coding	Yeats4	exon	ENSMUSG00000020171	ProperStrand	10	chr7	29136605	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-9.5349
chr4	86394838	86394856	protein_coding	Dennd4c	intron	ENSMUSG00000038024	NonProperStrand	9	chr3	108357419	108357509	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	5	-inf
chr5	102945225	102945241	protein_coding	Arhgap24	intron	ENSMUSG00000057315	NonProperStrand	21	chr16	23110454	23110509	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.3878
chr11	116299742	116299846	protein_coding	Fam100b	utr3	ENSMUSG00000050628	ProperStrand	97	chr17	24857827	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.5374
chr16	13833707	13833786	protein_coding	Pdxdc1	utr3	ENSMUSG00000022680	ProperStrand	26	chr16	23110877	23110967	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-5.5923
chr12	70442344	70442422	protein_coding	Nemf	exon	ENSMUSG00000020982	ProperStrand	77	chr7	19589763	19589781	protein_coding	Irf2bp1	utr5	ENSMUSG00000044030	ProperStrand	16	1	-15.5058
chr6	115757992	115758132	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr18	33954816	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	14	-0.8705
chr6	38100900	38100917	protein_coding	D630045J12Rik	intron	ENSMUSG00000063455	ProperStrand	22	chr16	23110962	23110999	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.4786
chr14	15572352	15572370	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr10	39978274	39978364	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-3.5358
chr9	60718281	60718371	protein_coding	Uaca	exon	ENSMUSG00000034485	ProperStrand	109	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	6	-inf
chr4	45412336	45412356	protein_coding	Mcart1	exon	ENSMUSG00000045973	ProperStrand	5	chrX	71517838	71517908	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	2	-18.3891
mmu-miR-6238	1	19	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr3	85943049	85943166	protein_coding	Rps3a	exon	ENSMUSG00000028081	ProperStrand	177	6	-inf
chr3	136526736	136526753	protein_coding	Ppp3ca	intron	ENSMUSG00000028161	NonProperStrand	120	chr16	23111689	23111755	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-0.9245
chr12	16946894	16946928	protein_coding	Rock2	intron	ENSMUSG00000020580	ProperStrand	27	chr3	123210854	123210979	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-5.9384
chr4	131865381	131865504	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	chr11	6520319	6520458	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	4	-1.3732
chr12	111932030	111932084	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr1	145626058	145626148	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	3	-9.4719
chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr11	103768294	103768310	protein_coding	Nsf	intron	ENSMUSG00000034187	ProperStrand	20	1	-8.6604
chr9	40612122	40612164	snoRNA	ENSMUSG00000075924_Snord14d	.	ENSMUSG00000075924	ProperStrand	131	chr4	41150096	41150132	snoRNA	ENSMUSG00000089265_SNORD121A	.	ENSMUSG00000089265	ProperStrand	370	2	-12.9200
chr6	88845353	88847357	protein_coding	Mcm2	exon	ENSMUSG00000002870	ProperStrand	83	chr11	106362327	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	4	-16.0691
chr17	63837159	63837181	protein_coding	Fbxl17	exon	ENSMUSG00000023965	ProperStrand	14	chr2	26493391	26493485	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-10.7407
chr6	47748408	47748435	protein_coding	Pdia4	exon	ENSMUSG00000025823	ProperStrand	41	chr11	69483136	69483191	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-5.3851
chr5	65952377	65952395	protein_coding	Ube2k	intron	ENSMUSG00000029203	ProperStrand	289	chr18	33954816	33954951	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-0.9876
chr17	46861595	46861611	protein_coding	Pex6	exon	ENSMUSG00000002763	ProperStrand	292	chr17	29632038	29632059	protein_coding	Pim1	utr3	ENSMUSG00000024014	ProperStrand	13	1	-13.2575
chr8	122157077	122157094	protein_coding	Kcng4	exon	ENSMUSG00000045246	ProperStrand	14	chr16	23110840	23110882	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.2008
chr10	47440491	47440581	LINE	L1_Mus1	L1	chr10L1_Mus147440318	ProperStrand	1	chr10	47440758	47440848	LINE	Lx9	L1	chr10Lx947440633	ProperStrand	1	1	-inf
chr3	146162924	146166250	protein_coding	Gng5	exon	ENSMUSG00000068523	ProperStrand	13	chr2	130103469	130103503	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	5	-inf
chr7	140955174	140955198	protein_coding	Dhx32	intron	ENSMUSG00000030986	ProperStrand	100	chr3	68889026	68889126	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-2.3612
chr18	41227146	41227226	LINE	L1Md_F2	L1	chr18L1Md_F241226868	ProperStrand	1	chr18	41227313	41227403	LINE	L1Md_F2	L1	chr18L1Md_F241227209	ProperStrand	1	1	-inf
chr6	125084606	125084696	protein_coding	Nop2	exon	ENSMUSG00000038279	ProperStrand	39	chr11	86570863	86570943	protein_coding	Cltc	utr5	ENSMUSG00000047126	ProperStrand	319	5	-20.1551
chr2	104689271	104689323	protein_coding	Prrg4	exon	ENSMUSG00000027171	ProperStrand	6	chr9	120038605	120038672	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	3	-17.7575
chr9	107810701	107813856	protein_coding	Mst1r	exon	ENSMUSG00000032584	NonProperStrand	30	chr1	58614896	58622713	protein_coding	Fam126b	utr5	ENSMUSG00000038174	NonProperStrand	2	1	-inf
chr3	130951432	130951460	protein_coding	Hadh	exon	ENSMUSG00000027984	ProperStrand	35	chr3	123210854	123210929	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.9916
chr7	35983752	35983768	protein_coding	Slc7a10	exon	ENSMUSG00000030495	NonProperStrand	33	chr11	69483153	69483237	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.5168
chr5	144016101	144016117	protein_coding	Zfp316	exon	ENSMUSG00000046658	NonProperStrand	4	chr13	51743567	51743660	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-12.5173
chr2	181268794	181268842	protein_coding	Dnajc5	intron	ENSMUSG00000000826	ProperStrand	14	chr11	6428077	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	4	-19.6237
chr15	79656228	79656328	protein_coding	Cbx6	utr3	ENSMUSG00000089715	ProperStrand	16	chr16	23111758	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	6	-19.6761
chr16	23111374	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	chr9	40612836	40612920	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	8	-1.3519
chr1	129670913	129670943	protein_coding	Ccnt2	exon	ENSMUSG00000026349	ProperStrand	34	chr7	135116203	135117932	protein_coding	Fus	exon	ENSMUSG00000030795	ProperStrand	162	1	-12.4664
chr13	6594840	6594890	protein_coding-noncoding	Pfkp	utr3	ENSMUSG00000021196	ProperStrand	20	chr17	85152844	85153930	protein_coding	Lrpprc	exon	ENSMUSG00000024120	ProperStrand	98	1	-14.5562
chr9	80113962	80117435	protein_coding	Myo6	exon	ENSMUSG00000033577	ProperStrand	29	chr16	23111770	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.1494
chr2	38762933	38763010	protein_coding	Nr6a1	intron	ENSMUSG00000063972	ProperStrand	52	chr10	92915709	92915799	tRNA	tRNA851-AspGTC	.	1445441	ProperStrand	6	1	-18.0147
chr9	43612629	43612665	protein_coding	Pvrl1	utr3	ENSMUSG00000032012	ProperStrand	45	chr17	13112534	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	8	-19.1313
chr5	100855902	100855943	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr2	91436261	91436335	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	5	-7.6268
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr19	41841508	41841628	protein_coding	Arhgap19	utr3	ENSMUSG00000025154	ProperStrand	34	1	-9.4584
chr3	157197294	157197311	protein_coding	Zranb2	utr5	ENSMUSG00000028180	ProperStrand	43	chr7	123476557	123477216	protein_coding	Rps13	exon	ENSMUSG00000090862	ProperStrand	36	1	-15.0220
chr7	151622260	151622310	protein_coding	Cttn	utr3	ENSMUSG00000031078	ProperStrand	33	chr7	52445347	52445364	protein_coding	Ccdc155	exon	ENSMUSG00000038292	ProperStrand	15	1	-17.3239
chr2	63936035	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr14	31827478	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-1.8879
chr4	116827121	116827187	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	chr1	39605590	39605690	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-1.5635
chr9	120038467	120038545	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	chr14	96988162	96988179	snoRNA	ENSMUSG00000064581_SNORA30	.	ENSMUSG00000064581	ProperStrand	146	2	-2.9164
chr11	48613880	48619550	protein_coding	Gnb2l1	utr5	ENSMUSG00000020372	ProperStrand	347	chr3	123210869	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	8	-4.5481
chr17	32175545	32175582	protein_coding	Rrp1b	intron	ENSMUSG00000058392	ProperStrand	38	chr11	62416979	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-6.9492
chr9	65550233	65550333	protein_coding	Zfp609	exon	ENSMUSG00000040524	ProperStrand	87	chr5	74489618	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-3.0978
chr19	8782450	8782490	protein_coding	Slc3a2	exon	ENSMUSG00000010095	ProperStrand	63	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.3492
chr16	17928124	17928142	protein_coding	Slc25a1	exon	ENSMUSG00000003528	ProperStrand	23	chr2	32818884	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-7.3770
chr12	109384068	109384090	protein_coding	Setd3	intron	ENSMUSG00000056770	ProperStrand	21	chrX	143918832	143918909	snoRNA	ENSMUSG00000084421_SNORA35	.	ENSMUSG00000084421	ProperStrand	293	2	-18.9256
chr5	92485090	92485190	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	chr4	41150095	41150158	snoRNA	ENSMUSG00000089265_SNORD121A	.	ENSMUSG00000089265	ProperStrand	370	1	-5.1489
chr3	144232907	144232969	protein_coding	Hs2st1	utr5	ENSMUSG00000040151	ProperStrand	18	chr17	35088957	35089012	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-8.2799
chr11	15212155	15212171	LINE	Lx	L1	chr11Lx15211662	ProperStrand	54	chr2	130102034	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-5.5625
chr4	155482322	155482339	LTR	RMER21A	ERV1	chr4RMER21A155481984	ProperStrand	7	chr7	117189868	117189995	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-7.5942
chrX	91014305	91022652	protein_coding	Pdk3	exon	ENSMUSG00000035232	ProperStrand	2	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-15.2057
chr6	38577350	38577366	protein_coding	Klrg2	utr3	ENSMUSG00000071537	NonProperStrand	37	chr4	131908244	131908300	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.1700
chr6	124820504	124820522	protein_coding	Cd4	exon	ENSMUSG00000023274	ProperStrand	9	chr5	74489595	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	2	-12.2490
chr17	35281357	35281613	protein_coding	Bag6	exon	ENSMUSG00000024392	ProperStrand	181	chr2	145076804	145209251	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-5.5443
chr8	80041484	80041501	protein_coding	Arhgap10	intron	ENSMUSG00000037148	ProperStrand	58	chr10	127521200	127521221	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	1	-8.8620
chr7	52706954	52706970	protein_coding	Gys1	exon	ENSMUSG00000003865	ProperStrand	28	chr15	79359584	79359639	protein_coding	Ddx17	utr3	ENSMUSG00000055065	ProperStrand	140	1	-13.1524
chr2	26493381	26493481	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr13	22114321	22114342	tRNA	tRNA972-SerCGA	.	239287	ProperStrand	7	4	-inf
chrX	70237450	70237472	miRNA	Mir2137	.	ENSMUSG00000089357	ProperStrand	50	chr8	77742558	77742574	protein_coding	Rasd2	exon	ENSMUSG00000034472	NonProperStrand	237	1	-10.9260
chr3	100750642	100750734	protein_coding-noncoding	Ttf2	utr3	ENSMUSG00000033222	ProperStrand	24	chr4	116360044	116360083	protein_coding	Prdx1	exon	ENSMUSG00000028691	ProperStrand	41	2	-inf
chr3	97214623	97214639	protein_coding	Olfr1402	exon	ENSMUSG00000051392	NonProperStrand	2	chr7	148634703	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-inf
chr11	77316863	77316880	protein_coding	Git1	exon	ENSMUSG00000011877	ProperStrand	95	chr2	26316088	26316162	protein_coding	Notch1	exon	ENSMUSG00000026923	ProperStrand	145	1	-10.6188
chr4	125300896	125309591	protein_coding	Grik3	exon	ENSMUSG00000001985	ProperStrand	126	chr7	20004598	20004615	protein_coding	A930016O22Rik	utr3	ENSMUSG00000040705	ProperStrand	7	5	-inf
chr5	33079194	33099584	protein_coding	Pisd	utr3	ENSMUSG00000023452	ProperStrand	9	chr4	131908687	131908772	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-7.7011
chr10	121490989	121491089	LINE	Lx4A	L1	chr10Lx4A121490983	ProperStrand	1	chr14	22804552	22804570	protein_coding	Zfp503	exon	ENSMUSG00000039081	NonProperStrand	7	1	-inf
chr4	128867196	128867212	protein_coding	Yars	exon	ENSMUSG00000028811	ProperStrand	131	chr11	98878341	98878371	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-4.7629
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr10	82286740	82286757	protein_coding	1700028I16Rik	utr3	ENSMUSG00000056821	ProperStrand	18	1	-8.3164
chr19	8840094	8840129	protein_coding	Nxf1	intron	ENSMUSG00000010097	ProperStrand	13	chr16	23110891	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-6.4970
chr3	108231619	108232214	protein_coding	Sars	exon	ENSMUSG00000068739	ProperStrand	45	chr16	23111388	23111468	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-4.8312
chr11	62416575	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	chr1	88247741	88247864	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	8	-1.3088
chr15	79908956	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	chr1	162966816	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	6	-3.0006
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr15	76528013	76528029	protein_coding	Gpt	exon	ENSMUSG00000022546	ProperStrand	3	1	-12.2357
chr5	22032196	22032264	protein_coding	Orc5	exon	ENSMUSG00000029012	ProperStrand	4	chr11	98878371	98878463	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-11.9321
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr19	7502333	7502350	protein_coding	Rtn3	exon	ENSMUSG00000024758	NonProperStrand	30	1	-9.1889
chrX	75332951	75333664	protein_coding	Obp1a	exon	ENSMUSG00000067684	ProperStrand	1	chr3	123210929	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-inf
chr9	44615260	44630203	protein_coding	Mll1	exon	ENSMUSG00000002028	ProperStrand	151	chr7	116663635	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-2.1453
chr16	8858429	8858479	protein_coding	1810013L24Rik	utr3	ENSMUSG00000022507	ProperStrand	20	chr7	117189957	117190022	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-5.4343
chr3	100726559	100726577	protein_coding	Trim45	utr5	ENSMUSG00000033233	ProperStrand	59	chr6	71832629	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-5.6439
chr13	9833553	9833652	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr1	162966204	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	2	-0.9729
chr1	74734841	74734857	protein_coding	Ttll4	exon	ENSMUSG00000033257	ProperStrand	24	chr16	23111384	23111447	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.7195
chr1	102076760	102076791	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	chr1	145626121	145626188	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	3	-11.7643
chr2	131005220	131005236	protein_coding	Cenpb	exon	ENSMUSG00000068267	NonProperStrand	38	chr19	8963028	8963081	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.0700
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr9	22225418	22225489	protein_coding	9530077C05Rik	intron	ENSMUSG00000036411	ProperStrand	4	1	-14.4758
chr12	112999128	112999149	protein_coding	Klc1	intron	ENSMUSG00000021288	ProperStrand	35	chr12	106269347	106269437	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-5.1779
chr2	144214360	144214390	protein_coding	Csrp2bp	intron	ENSMUSG00000027425	ProperStrand	32	chr11	69483183	69483273	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.5740
chr14	122870816	122870832	lincRNA	2610035F20Rik	exon	ENSMUSG00000085555	ProperStrand	29	chr16	23111373	23111401	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.3903
chr13	59575010	59575126	protein_coding	Agtpbp1	utr3	ENSMUSG00000021557	ProperStrand	35	chr18	35714178	35714219	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.4569
chr5	76985690	76985730	protein_coding	Exoc1	intron	ENSMUSG00000036435	ProperStrand	12	chr10	90581034	90581120	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	4	-inf
chr11	33060346	33060393	protein_coding	Npm1	exon	ENSMUSG00000057113	ProperStrand	352	chr1	162966011	162966041	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-0.8166
chr12	77637545	77637572	protein_coding	Plekhg3	intron	ENSMUSG00000052609	ProperStrand	19	chr4	122970443	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-9.7357
chr14	70183812	70183832	protein_coding	Tnfrsf10b	utr3	ENSMUSG00000022074	ProperStrand	57	chr1	7125319	7125393	protein_coding	Pcmtd1	intron	ENSMUSG00000051285	ProperStrand	19	1	-15.7381
chr16	57391759	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr17	35087891	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	6	-6.1745
chr12	31975135	31975152	protein_coding	Lamb1	intron	ENSMUSG00000002900	NonProperStrand	45	chr11	69483237	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.9519
chr2	164257636	164257652	protein_coding	Sdc4	intron	ENSMUSG00000017009	ProperStrand	177	chr5	116063823	116064152	protein_coding	Gcn1l1	exon	ENSMUSG00000041638	ProperStrand	408	1	-7.3156
chr8	122480146	122480535	protein_coding	Usp10	exon	ENSMUSG00000031826	ProperStrand	98	chr18	35716820	35716884	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.4109
chr7	30231460	30231550	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	chr12	106269479	106269559	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	2	-1.3297
chr7	13516166	13516189	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr8	113366285	113366338	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	1	-4.6079
chr1	72906639	72906656	protein_coding	Igfbp5	utr3	ENSMUSG00000026185	ProperStrand	5	chr18	35714218	35714246	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-8.4504
chr16	10963505	10966606	protein_coding	Litaf	exon	ENSMUSG00000022500	ProperStrand	25	chr5	116309283	116309331	protein_coding	Cit	exon	ENSMUSG00000029516	ProperStrand	45	1	-15.6518
chr6	124810680	124810696	protein_coding	Gpr162	exon	ENSMUSG00000038390	NonProperStrand	40	chr5	145532202	145532277	protein_coding	Trrap	intron	ENSMUSG00000045482	ProperStrand	399	1	-10.3353
chr8	97705288	97705308	SINE	ID4	ID	chr8ID497705237	ProperStrand	1	chr7	103956855	103956872	protein_coding	Odz4	intron	ENSMUSG00000048078	ProperStrand	93	1	-inf
chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	chr1	89236208	89236231	protein_coding	Gigyf2	intron	ENSMUSG00000048000	ProperStrand	128	1	-7.6744
chr9	72584504	72584689	protein_coding	Nedd4	exon	ENSMUSG00000032216	ProperStrand	308	chr18	35102297	35102337	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	5	-14.5815
chr5	114575579	114575598	protein_coding	Alkbh2	exon	ENSMUSG00000044339	ProperStrand	5	chr19	8963032	8963048	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-15.3183
chr11	116518480	116518570	protein_coding-noncoding	Gm11744	exon	ENSMUSG00000075410	ProperStrand	1	chr11	116518599	116518689	protein_coding	Gm11744	intron	ENSMUSG00000075410	ProperStrand	2	1	-inf
chr7	91259168	91259248	protein_coding	Fam108c	exon	ENSMUSG00000038459	ProperStrand	19	chr3	87541188	87541278	protein_coding	Arhgef11	utr3	ENSMUSG00000041977	ProperStrand	16	1	-18.3346
chr14	51427129	51427219	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr4	56910517	56910597	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-0.8437
chr1	173341933	173341949	protein_coding	Usf1	utr5	ENSMUSG00000026641	NonProperStrand	144	chr9	120038466	120038546	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-2.9497
chr4	55431651	55431668	lincRNA	Gm12505	exon	ENSMUSG00000087070	ProperStrand	447	chr18	35716684	35716764	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	5	-1.3299
chr13	9833585	9833686	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr8	86754837	86754894	protein_coding	Zswim4	exon	ENSMUSG00000035671	ProperStrand	27	3	-14.9709
chr1	151500554	151500571	LINE	L1MC1	L1	chr1L1MC1151500437	ProperStrand	1	chr7	29136525	29136566	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-inf
chr3	104597066	104597166	protein_coding	Rhoc	utr3	ENSMUSG00000002233	ProperStrand	41	chr16	23111779	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.5349
chr15	96199978	96200361	protein_coding	Arid2	exon	ENSMUSG00000033237	ProperStrand	34	chr9	64736361	64736731	protein_coding	Dennd4a	exon	ENSMUSG00000053641	ProperStrand	537	1	-10.0709
chr11	107042356	107042382	protein_coding	Nol11	exon	ENSMUSG00000018433	ProperStrand	12	chr16	23110460	23110550	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.4970
chrX	54511898	54511961	protein_coding	Arhgef6	intron	ENSMUSG00000031133	ProperStrand	20	chr9	120038467	120038543	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.1184
chr3	88515256	88515320	protein_coding	2810403A07Rik	utr3	ENSMUSG00000028060	ProperStrand	22	chr14	33005038	33005063	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	4	-17.9958
chr3	88667472	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr4	131908233	131908452	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	50	-19.0526
chr2	26203131	26203147	protein_coding	Gpsm1	utr3	ENSMUSG00000026930	ProperStrand	93	chr9	15119631	15119693	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.9013
chr7	148634653	148636948	protein_coding	Rplp2	exon	ENSMUSG00000025508	ProperStrand	106	chr12	55797813	55797903	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	1	-6.5675
chr15	81972284	81972321	protein_coding	Ccdc134	utr3	ENSMUSG00000068114	ProperStrand	8	chr4	116875170	116875249	snRNA	ENSMUSG00000070228_U5	.	ENSMUSG00000070228	ProperStrand	131	3	-19.6820
chr1	40047068	40047130	protein_coding	Map4k4	exon	ENSMUSG00000026074	ProperStrand	348	chr3	108357419	108357500	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-1.4838
chr18	21013977	21013995	protein_coding	Trappc8	intron	ENSMUSG00000033382	NonProperStrand	2	chr17	13112450	13112511	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-11.9614
chr13	9833578	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr11	84646706	84646784	protein_coding	Ggnbp2	intron	ENSMUSG00000020530	ProperStrand	30	4	-19.6633
chr9	114424858	114424878	protein_coding	Trim71	exon	ENSMUSG00000079259	ProperStrand	162	chr17	24857794	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-0.8561
chr1	88035675	88035705	protein_coding	Psmd1	utr3	ENSMUSG00000026229	ProperStrand	664	chr15	5068442	5068479	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-1.6980
chr16	75761550	75765200	protein_coding	Hspa13	exon	ENSMUSG00000032932	NonProperStrand	57	chr4	131908236	131908357	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-2.8086
chr16	86365938	86366028	LINE	L1MC3	L1	chr16L1MC386365841	ProperStrand	1	chr16	86366272	86366362	LINE	L1MC3	L1	chr16L1MC386366080	ProperStrand	1	1	-inf
chr14	59854775	59854845	protein_coding	Rcbtb1	utr3	ENSMUSG00000035469	ProperStrand	39	chr16	23111758	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.6215
chr13	21871830	21871882	protein_coding	Hist1h1b	exon	ENSMUSG00000058773	ProperStrand	65	chr11	69483136	69483181	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.3145
chr11	119971756	119972229	protein_coding	Slc38a10	exon	ENSMUSG00000061306	ProperStrand	91	chr11	97642952	97643060	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-5.0458
chr16	61342805	61342823	LINE	Lx9	L1	chr16Lx961341958	ProperStrand	1	chr19	8963085	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-inf
chr15	76259524	76259590	protein_coding	Heatr7a	intron	ENSMUSG00000022558	ProperStrand	48	chr13	96100554	96100619	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	1	-8.5153
chr9	24245266	24245284	protein_coding	Dpy19l1	exon	ENSMUSG00000043067	ProperStrand	24	chr5	130300436	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.1835
chr1	108692301	108692321	protein_coding	Vps4b	intron	ENSMUSG00000009907	NonProperStrand	2	chr18	35714155	35714255	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-10.7439
chr1	102076760	102076796	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	chr4	116827119	116827190	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-3.3199
chr10	72117661	72117720	protein_coding	Zwint	utr5	ENSMUSG00000019923	ProperStrand	22	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	4	-17.1187
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr1	164628331	164629036	protein_coding	Prrc2c	exon	ENSMUSG00000040225	ProperStrand	413	1	-2.7278
chr15	77356785	77356801	protein_coding	Apol7c	exon	ENSMUSG00000044309	ProperStrand	197	chr11	55296195	55296215	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-3.8902
chr4	131888073	131888103	protein_coding	Rcc1	utr3	ENSMUSG00000028896	ProperStrand	55	chr18	35716712	35716802	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.3144
chr3	95637744	95638081	protein_coding	Prpf3	exon	ENSMUSG00000015748	ProperStrand	29	chr11	69483169	69483277	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-6.3832
chr11	69495172	69495220	protein_coding	Senp3	utr5	ENSMUSG00000005204	ProperStrand	65	chr15	79913288	79913345	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-3.4448
chr16	57391761	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr7	52382755	52382807	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-1.6840
chr9	59518321	59518421	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr4	131866614	131866674	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	2	-5.3981
chr6	88435849	88435865	protein_coding	Ruvbl1	exon	ENSMUSG00000030079	NonProperStrand	54	chr3	102860286	102860337	protein_coding	Csde1	exon	ENSMUSG00000068823	ProperStrand	122	1	-12.1006
chr13	9833551	9833622	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr13	69751859	69751881	protein_coding	Nsun2	exon	ENSMUSG00000021595	ProperStrand	110	2	-6.4138
chr2	90705416	90705490	protein_coding	Mtch2	utr3	ENSMUSG00000027282	ProperStrand	12	chr16	23111705	23111795	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-11.7745
chr7	26511169	26519775	protein_coding	Hnrnpul1	exon	ENSMUSG00000040725	ProperStrand	84	chr7	148634766	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	6	-18.0094
chr2	25563070	25563086	antisense	A230005M16Rik	.	ENSMUSG00000087612	ProperStrand	103	chr2	32817270	32817311	protein_coding	Rpl12	utr5	ENSMUSG00000038900	ProperStrand	167	1	-10.1741
chr9	78327264	78327323	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr14	31827478	31827545	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-0.8231
chr16	94347269	94347287	protein_coding	Sim2	exon	ENSMUSG00000062713	NonProperStrand	3	chr7	116663664	116663728	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-8.5982
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr5	8613647	8613668	protein_coding	Rundc3b	intron	ENSMUSG00000040570	NonProperStrand	2	1	-15.4620
chr9	40611257	40611317	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr3	32851289	32851306	protein_coding	Pex5l	intron	ENSMUSG00000027674	ProperStrand	52	1	-8.4256
chr6	127913709	127913728	protein_coding	Tspan9	utr3	ENSMUSG00000030352	ProperStrand	67	chr18	35714189	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-3.2416
chr12	29360145	29360222	protein_coding	Adi1	exon	ENSMUSG00000020629	ProperStrand	27	chrX	84483715	84483741	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-9.8586
chr12	37040848	37040865	protein_coding	Sostdc1	utr5	ENSMUSG00000036169	NonProperStrand	13	chr10	23505151	23505205	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.8218
chr13	68759738	68764669	protein_coding	Adcy2	exon	ENSMUSG00000021536	ProperStrand	237	chr2	32996536	32996597	protein_coding	Ralgps1	exon	ENSMUSG00000038831	ProperStrand	75	1	-10.1104
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr11	55296276	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-0.7246
chr1	138382212	138382230	protein_coding	Kif14	intron	ENSMUSG00000041498	NonProperStrand	36	chr18	35716754	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-7.8292
chr11	69548635	69548708	protein_coding	Polr2a	exon	ENSMUSG00000005198	ProperStrand	200	chr15	77604377	77604463	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	1	-6.4153
chr11	83833234	83833267	protein_coding	Synrg	exon	ENSMUSG00000034940	ProperStrand	49	chr11	77996560	77996623	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-6.4924
chrX	92221203	92221220	protein_coding	Spin4	exon	ENSMUSG00000071722	NonProperStrand	14	chr17	24857715	24857794	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-8.3319
chr19	21919185	21919275	protein_coding	Tmem2	exon	ENSMUSG00000024754	ProperStrand	133	chr8	73419664	73419744	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-1.7861
chr14	31985167	31985183	protein_coding	Nisch	exon	ENSMUSG00000021910	ProperStrand	125	chrX	103395629	103397831	protein_coding	Pgk1	exon	ENSMUSG00000062070	ProperStrand	484	2	-12.2599
chrX	54306768	54306791	protein_coding	Htatsf1	utr5	ENSMUSG00000067873	ProperStrand	48	chr17	35087894	35087943	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	2	-9.2165
chr7	88529496	88529520	protein_coding	Cpeb1	intron	ENSMUSG00000025586	NonProperStrand	29	chr11	69483136	69483186	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-6.3832
chr18	42712297	42712322	protein_coding	Tcerg1	intron	ENSMUSG00000024498	ProperStrand	210	chr2	26493366	26493474	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-1.6021
chrX	20265919	20270454	protein_coding	Cdk16	utr5	ENSMUSG00000031065	ProperStrand	30	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-10.3772
chr7	146068415	146068431	protein_coding	Ppp2r2d	intron	ENSMUSG00000041769	NonProperStrand	7	chr5	121655016	121655127	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-8.0440
chr8	120107464	120109124	protein_coding	Plcg2	exon	ENSMUSG00000034330	ProperStrand	57	chr4	131866656	131866673	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	1	-9.2080
chr18	68133452	68133468	protein_coding	D18Ertd653e	intron	ENSMUSG00000024544	NonProperStrand	8	chr19	8798740	8798796	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-8.8700
chr16	87485916	87485958	protein_coding	Cct8	exon	ENSMUSG00000025613	ProperStrand	65	chr6	96322858	96322874	protein_coding	Fam19a1	intron	ENSMUSG00000059187	NonProperStrand	60	1	-13.1552
chr11	69212859	69212903	protein_coding	Kdm6b	utr3	ENSMUSG00000018476	ProperStrand	76	chr8	18933071	18933092	snoRNA	ENSMUSG00000088420_SNORA70	.	ENSMUSG00000088420	ProperStrand	12	1	-16.1318
chr17	22498559	22498594	protein_coding	Zfp758	utr5	ENSMUSG00000044501	ProperStrand	4	chr10	23505559	23505617	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	4	-inf
chr12	112215557	112215574	protein_coding	Ankrd9	exon	ENSMUSG00000037904	ProperStrand	46	chr4	129303696	129303747	protein_coding	Txlna	utr3	ENSMUSG00000053841	ProperStrand	37	1	-14.8352
chr6	125399469	125399486	Simple_repeat	(TCTCC)n	Simple_repeat	chr6(TCTCC)n125399468	NonProperStrand	16	chr4	131908810	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.4136
chr16	30514154	30514171	protein_coding	Tmem44	utr3	ENSMUSG00000022537	ProperStrand	217	chr8	32260335	32260423	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-2.2971
chr14	58836954	58836981	LTR	BGLII_B	ERVK	chr14BGLII_B58836751	NonProperStrand	7	chr5	136707645	136707662	protein_coding	Sh2b2	exon	ENSMUSG00000005057	NonProperStrand	101	1	-16.7173
chr9	42726316	42726384	protein_coding	Grik4	intron	ENSMUSG00000032017	ProperStrand	32	chr16	23111395	23111485	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.2238
chr6	29501919	29504849	protein_coding	Tnpo3	exon	ENSMUSG00000012535	ProperStrand	58	chr9	62693238	62693269	protein_coding	Cln6	intron	ENSMUSG00000032245	ProperStrand	34	1	-14.5262
chr6	112636595	112636642	protein_coding	Rad18	intron	ENSMUSG00000030254	ProperStrand	38	chr3	123210854	123210894	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.8448
chr15	100416584	100416600	protein_coding	Pou6f1	intron	ENSMUSG00000009739	ProperStrand	44	chr11	106362588	106362639	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-8.0247
chr12	24729685	24729719	protein_coding	9030624G23Rik	exon	ENSMUSG00000073158	ProperStrand	2	chr7	116664809	116664899	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-9.7350
chr8	73440410	73440987	protein_coding	Mtap1s	exon	ENSMUSG00000019261	ProperStrand	60	chr11	69483136	69483190	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.4498
chr5	9128022	9129161	protein_coding	Dmtf1	exon	ENSMUSG00000042508	ProperStrand	6	chr19	25016725	25016787	snoRNA	ENSMUSG00000064896_SNORA19	.	ENSMUSG00000064896	ProperStrand	88	1	-17.2070
chr10	122002948	122003048	LINE	L1Md_F2	L1	chr10L1Md_F2122002095	NonProperStrand	23	chr7	54442452	54442575	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	2	-18.9861
chr17	45706724	45706770	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr4	53873625	53873650	protein_coding	Tmem38b	utr3	ENSMUSG00000028420	ProperStrand	22	2	-13.9370
chr15	96830047	96836279	protein_coding	Slc38a4	exon	ENSMUSG00000022464	ProperStrand	139	chr5	108336363	108336460	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-3.3028
chr17	35183321	35183339	protein_coding	Msh5	utr5	ENSMUSG00000007035	NonProperStrand	4	chr1	162965530	162965600	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-8.7752
chr1	162965530	162965593	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr4	122970468	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	6	-0.9928
chr12	111932470	111932787	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr2	26493398	26493478	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	14	-14.4598
chr15	98604924	98606960	protein_coding	Wnt10b	exon	ENSMUSG00000022996	NonProperStrand	189	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-7.0820
chr11	118900007	118900023	protein_coding	Cbx8	exon	ENSMUSG00000025578	ProperStrand	95	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	1	-6.1189
chr1	164618253	164618306	protein_coding	Prrc2c	exon	ENSMUSG00000040225	ProperStrand	413	chr17	35089181	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	4	-7.4866
chr4	57969085	57969164	protein_coding	Txn1	utr5	ENSMUSG00000028367	ProperStrand	31	chrX	93136011	93136027	protein_coding	Las1l	exon	ENSMUSG00000057421	ProperStrand	248	1	-11.8020
chr6	106677064	106677144	protein_coding	Il5ra	intron	ENSMUSG00000005364	ProperStrand	1	chr15	7993085	7993175	protein_coding	Wdr70	intron	ENSMUSG00000039828	NonProperStrand	7	1	-inf
chr15	77597977	77608283	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr11	6428073	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-1.0162
chr14	87912387	87912403	protein_coding	Tdrd3	utr3	ENSMUSG00000022019	NonProperStrand	46	chr5	121655098	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.2480
chr14	20600509	20629237	protein_coding	Nid2	exon	ENSMUSG00000021806	ProperStrand	372	chr11	69483136	69483230	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-1.0211
chr12	88778745	88778773	protein_coding	Alkbh1	intron	ENSMUSG00000079036	ProperStrand	70	chr12	88778626	88778723	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	5	-inf
chr6	7333536	7333553	LINE	L1MA5	L1	chr6L1MA57333487	ProperStrand	3	chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	1	-15.0899
chr7	119934447	119934484	protein_coding	Tead1	intron	ENSMUSG00000055320	ProperStrand	217	chr2	89368461	89368479	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	2	-12.4404
chr2	164596287	164596307	protein_coding	Ube2c	intron	ENSMUSG00000001403	ProperStrand	40	chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	2	-11.6727
chr5	136333036	136333053	protein_coding	Srrm3	utr3	ENSMUSG00000039860	ProperStrand	41	chr8	73419683	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.8312
chr7	24779190	24779213	SINE	ID_B1	B4	chr7ID_B124779183	NonProperStrand	54	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-9.1908
mmu-miR-2137	2	20	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	chr7	109534670	109556920	protein_coding	Stim1	exon	ENSMUSG00000030987	ProperStrand	24	2	-19.3211
chr4	136876942	136877022	protein_coding	Cdc42	utr3	ENSMUSG00000006699	ProperStrand	38	chr15	78912027	78912315	protein_coding	Eif3l	exon	ENSMUSG00000033047	ProperStrand	81	13	-inf
chr1	53409486	53409502	protein_coding	Asnsd1	utr5	ENSMUSG00000026095	NonProperStrand	105	chr10	126532147	126532163	protein_coding	Os9	utr3	ENSMUSG00000040462	NonProperStrand	28	1	-13.7290
chr5	108336226	108336946	protein_coding	Rpl5	exon	ENSMUSG00000058558	ProperStrand	235	chr14	31827477	31827511	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-4.2882
chr5	125509049	125509121	protein_coding	Ncor2	exon	ENSMUSG00000029478	ProperStrand	377	chr11	62418021	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-2.1796
chr3	34549182	34550126	protein_coding	Sox2	utr5	ENSMUSG00000074637	ProperStrand	299	chr9	15119646	15119769	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-0.9781
chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	chr12	58592633	58592703	protein_coding	Mipol1	intron	ENSMUSG00000047022	ProperStrand	40	1	-8.9933
chr9	65127126	65127142	protein_coding	Cilp	exon	ENSMUSG00000042254	ProperStrand	212	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-3.4370
chr6	6088146	6088163	protein_coding	Slc25a13	intron	ENSMUSG00000015112	ProperStrand	78	chr11	100608708	100608727	protein_coding	Kcnh4	intron	ENSMUSG00000035355	NonProperStrand	3	1	-20.0879
chr3	127382745	127382761	protein_coding	Alpk1	exon	ENSMUSG00000028028	ProperStrand	19	chr5	124238141	124238199	protein_coding	Kntc1	intron	ENSMUSG00000029414	ProperStrand	27	1	-17.2075
chr1	162965981	162966035	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	chr1	173041608	173041649	tRNA	tRNA710-ValCAC	.	100794	ProperStrand	206	2	-2.8355
chr4	149012402	149012481	protein_coding	Clstn1	exon	ENSMUSG00000039953	ProperStrand	173	chr7	117189957	117189987	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-1.5577
chr8	86625608	86625636	protein_coding	Dcaf15	exon	ENSMUSG00000037103	ProperStrand	32	chr9	120038552	120038635	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.2048
chr18	84840229	84840245	protein_coding	Cndp2	exon	ENSMUSG00000024644	ProperStrand	10	chrX	70336037	70336068	protein_coding	Xlr3a	intron	ENSMUSG00000057836	ProperStrand	1	1	-inf
chr16	68020926	68021016	LINE	Lx3_Mus	L1	chr16Lx3_Mus68019867	ProperStrand	1	chr4	38039291	38039371	LINE	Lx3A	L1	chr4Lx3A38039198	ProperStrand	1	1	-inf
chr2	130102832	130103254	protein_coding	Nop56	exon	ENSMUSG00000027405	ProperStrand	125	chr15	79913288	79913319	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.2951
chr4	3762427	3762507	protein_coding-noncoding	Rps20	utr3	ENSMUSG00000028234	ProperStrand	4	chr4	3762132	3762405	protein_coding	Rps20	exon	ENSMUSG00000028234	ProperStrand	71	2	-inf
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr17	45707616	45707687	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	1	-2.3187
chr2	84530865	84531297	protein_coding	Zdhhc5	exon	ENSMUSG00000034075	NonProperStrand	144	chr10	80642905	80642924	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-4.4020
chr11	98546839	98546855	protein_coding	Psmd3	exon	ENSMUSG00000017221	ProperStrand	51	chr7	51505224	51505308	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	3	-18.3190
chr11	51799153	51813915	protein_coding	Ube2b	utr5	ENSMUSG00000020390	ProperStrand	57	chr16	23111740	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	6	-12.4401
chr16	13715668	13725249	protein_coding	Pla2g10	exon	ENSMUSG00000022683	ProperStrand	6	chr11	97642952	97643012	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-6.9580
chr2	90235300	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr3	116603636	116603660	protein_coding	Frrs1	intron	ENSMUSG00000033386	ProperStrand	27	1	-6.0220
chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	chr15	79908956	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-2.2732
chr18	35831157	35831175	protein_coding	Dnajc18	utr3	ENSMUSG00000024350	ProperStrand	4	chr11	77996558	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-11.7355
chr5	124694907	124694997	protein_coding	Pitpnm2	intron	ENSMUSG00000029406	ProperStrand	12	chr6	71832580	71832660	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-8.8530
chr8	125626945	125627005	snoRNA	ENSMUSG00000064450_Snord68	.	ENSMUSG00000064450	ProperStrand	181	chr12	88778735	88778768	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-4.3532
chr11	101466255	101466345	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	chr1	162966813	162966843	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-2.1439
chr13	99585154	99585186	protein_coding	Fcho2	utr5	ENSMUSG00000041685	ProperStrand	10	chr10	41644311	41644329	protein_coding	Armc2	exon	ENSMUSG00000071324	ProperStrand	281	1	-13.8851
chr17	23912161	23912181	antisense	Gm16275	.	ENSMUSG00000086719	NonProperStrand	3	chr17	45769879	45770002	protein_coding	Capn11	exon	ENSMUSG00000058626	ProperStrand	19	1	-inf
chr12	102150781	102150861	protein_coding	Ccdc88c	utr3	ENSMUSG00000021182	ProperStrand	151	chr12	88778631	88778721	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-4.6982
chr9	70574413	70574430	protein_coding	Adam10	intron	ENSMUSG00000054693	NonProperStrand	7	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-7.5326
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr6	71839547	71839579	protein_coding	Ptcd3	intron	ENSMUSG00000063884	ProperStrand	34	1	-6.0677
chr11	115200753	115200770	protein_coding	Otop3	exon	ENSMUSG00000018862	ProperStrand	59	chr2	26493366	26493485	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-3.7738
chr13	55425704	55425784	protein_coding	Prelid1	exon	ENSMUSG00000021486	ProperStrand	19	chr8	4324892	4324909	protein_coding	Elavl1	utr5	ENSMUSG00000040028	NonProperStrand	20	3	-inf
chr2	30675197	30675213	protein_coding	Mettl11a	exon	ENSMUSG00000026857	ProperStrand	51	chr11	78654733	78654777	protein_coding	1810012P15Rik	utr3	ENSMUSG00000072640	ProperStrand	5	2	-21.9932
chr4	148665583	148681551	protein_coding	Kif1b	utr5	ENSMUSG00000063077	ProperStrand	60	chr3	108357360	108357390	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-4.5400
chr11	106853301	106853335	protein_coding	Kpna2	exon	ENSMUSG00000018362	ProperStrand	70	chr5	130300522	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.2491
chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	chr4	131866166	131866239	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-1.3081
chr14	52796307	52816795	protein_coding	Supt16h	exon	ENSMUSG00000035726	ProperStrand	193	chr7	29136535	29136615	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-2.4570
chr13	8856142	8856158	protein_coding	Wdr37	exon	ENSMUSG00000021147	NonProperStrand	5	chr2	26494777	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-8.0805
chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	chr3	97817679	97851652	protein_coding	Notch2	exon	ENSMUSG00000027878	ProperStrand	86	1	-9.3521
chr19	56003755	56003771	protein_coding	Tcf7l2	intron	ENSMUSG00000024985	ProperStrand	103	chr8	129468858	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-3.4035
chr1	120930912	120931013	protein_coding	Gli2	intron	ENSMUSG00000048402	ProperStrand	148	chr4	131908355	131908412	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	12	-14.1236
chr17	46814084	46814100	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr14	33005094	33005139	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-0.7506
chr2	181544992	181545014	protein_coding	Myt1	exon	ENSMUSG00000010505	ProperStrand	14	chr16	23110517	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-12.4219
chr7	36400047	36400884	protein_coding	Ankrd27	exon	ENSMUSG00000034867	ProperStrand	132	chr8	32260335	32260370	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-3.1597
chr10	127179938	127180010	protein_coding	Zbtb39	exon	ENSMUSG00000044617	ProperStrand	9	chr7	116663715	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-6.1447
chr1	71625175	71625265	protein_coding	Atic	utr3	ENSMUSG00000026192	ProperStrand	30	chr4	131908257	131908337	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.5256
chr2	102356443	102356461	LINE	Lx6	L1	chr2Lx6102356379	ProperStrand	11	chr5	74489621	74489672	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-7.1242
chr11	97639681	97643115	protein_coding	Rpl23	exon	ENSMUSG00000071415	ProperStrand	920	chr18	35714167	35714257	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	6	-1.9618
chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-1.2880
chr12	52852953	52853003	protein_coding	Hectd1	exon	ENSMUSG00000035247	ProperStrand	41	chr7	117190017	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	3	-9.8653
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr17	35089181	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-0.8173
chr7	52309977	52309993	protein_coding	Prrg2	exon	ENSMUSG00000007837	NonProperStrand	281	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	5	-21.5497
chr15	37834868	37834948	Low_complexity	GA-rich	Low_complexity	chr15GA-rich37834887	NonProperStrand	1	chr15	37834640	37834730	SINE	B4A	B4	chr15B4A37834599	NonProperStrand	1	1	-inf
chr14	124353869	124353886	protein_coding	Itgbl1	exon	ENSMUSG00000032925	ProperStrand	159	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-3.3592
chr2	89180247	89180264	protein_coding	Olfr1233	exon	ENSMUSG00000075091	ProperStrand	1	chr18	33954882	33954950	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-inf
chrX	71518332	71518351	protein_coding	Rpl10	exon	ENSMUSG00000008682	ProperStrand	71	chr2	181405343	181405359	protein_coding	Sox18	exon	ENSMUSG00000046470	ProperStrand	96	1	-12.0306
chr2	164804674	164804696	protein_coding	Slc12a5	intron	ENSMUSG00000017740	NonProperStrand	40	chr14	80168711	80168727	protein_coding	Pcdh8	exon	ENSMUSG00000036422	ProperStrand	2	1	-inf
chr4	125816555	125816624	protein_coding	Stk40	utr3	ENSMUSG00000042608	ProperStrand	32	chr16	23110968	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-6.3608
chr7	52309977	52309993	protein_coding	Prrg2	exon	ENSMUSG00000007837	NonProperStrand	281	chr7	5027258	5027287	protein_coding	U2af2	exon	ENSMUSG00000030435	ProperStrand	103	1	-9.1348
chr7	49831491	49831570	LINE	L1_Mus1	L1	chr7L1_Mus149831110	NonProperStrand	3	chr4	131908693	131908741	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-inf
chr18	73693165	73693187	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr5	115939527	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	6	-7.3308
chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	chr7	52378461	52378480	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	1	-4.4610
chr11	60527717	60527803	protein_coding	Flii	utr3	ENSMUSG00000002812	ProperStrand	42	chr12	17552961	17553051	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	2	-9.4486
chr17	87421244	87421277	protein_coding	Pigf	exon	ENSMUSG00000024145	ProperStrand	4	chr4	131865489	131865515	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-9.5621
chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	chr17	28023311	28023327	protein_coding	Uhrf1bp1	exon	ENSMUSG00000039512	NonProperStrand	14	1	-12.8382
chr12	60770156	60770173	LTR	LTR33	ERVL	chr12LTR3360769932	NonProperStrand	1	chr18	35714145	35714245	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-inf
chr12	110888878	110888903	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr15	54914650	54915616	protein_coding	Dscc1	exon	ENSMUSG00000022422	ProperStrand	6	1	-13.4237
chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	chr5	108336363	108336418	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-2.8390
chrX	153206015	153206105	LINE	L1Md_F2	L1	chrXL1Md_F2153205620	NonProperStrand	1	chr18	57706276	57706366	lincRNA	4930511M06Rik	exon	ENSMUSG00000086607	ProperStrand	2	1	-inf
chr10	20080834	20080860	protein_coding	Fam54a	utr3	ENSMUSG00000019992	ProperStrand	232	chr19	8799581	8799629	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	5	-16.8097
chr7	133940397	133940853	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	chr11	4820972	4820990	protein_coding	Thoc5	intron	ENSMUSG00000034274	ProperStrand	325	1	-5.0127
chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	chr19	8986161	8986188	protein_coding	Ganab	exon	ENSMUSG00000071650	ProperStrand	145	1	-6.7488
chr5	121828827	121828843	protein_coding	Trafd1	exon	ENSMUSG00000042726	ProperStrand	81	chr11	106362326	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-5.2561
chrX	54307359	54307449	protein_coding-noncoding	Htatsf1	utr5	ENSMUSG00000067873	ProperStrand	1	chr1	72272872	72272952	snRNA	ENSMUSG00000075752_U2	.	ENSMUSG00000075752	ProperStrand	535	1	-inf
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr11	6519851	6519941	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-2.6188
chr4	134774583	134779380	protein_coding	Clic4	exon	ENSMUSG00000037242	ProperStrand	84	chr11	55296195	55296258	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	3	-12.8332
chr6	126772182	126772199	protein_coding	Ndufa9	exon	ENSMUSG00000000399	ProperStrand	9	chr19	8963026	8963082	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-9.7258
chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	chr2	130103448	130103500	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	2	-1.6461
chr12	111932341	111932803	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr9	64022861	64022923	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	2	-5.4050
chr14	118527486	118529840	protein_coding	Tgds	exon	ENSMUSG00000022130	ProperStrand	5	chr11	69483160	69483251	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-7.3324
chr16	21903994	21905191	protein_coding	Map3k13	exon	ENSMUSG00000033618	NonProperStrand	16	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.8202
chr12	114290175	114290191	protein_coding	Pacs2	intron	ENSMUSG00000021143	NonProperStrand	302	chr15	76718733	76720445	protein_coding	Zfp7	exon	ENSMUSG00000033669	ProperStrand	15	1	-12.8965
chr4	42993324	42995862	protein_coding	Vcp	exon	ENSMUSG00000028452	ProperStrand	108	chr16	23111743	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	10	-16.7298
chrX	71517851	71517951	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	NonProperStrand	3	chr7	118219574	118219608	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	NonProperStrand	8	1	-20.4785
chr10	90581529	90582275	protein_coding	Slc25a3	exon	ENSMUSG00000061904	ProperStrand	74	chr2	26494710	26494788	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.7350
chr16	17926540	17926593	protein_coding	Slc25a1	exon	ENSMUSG00000003528	ProperStrand	23	chr4	131908707	131908797	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.7500
chr5	100855902	100855973	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr9	78327492	78327548	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	4	-3.4362
chr9	16159704	16159723	protein_coding	Fat3	intron	ENSMUSG00000074505	ProperStrand	14	chr4	131908357	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.9265
chr1	75484537	75484553	protein_coding	Obsl1	exon	ENSMUSG00000026211	NonProperStrand	192	chr14	76247711	76247768	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-2.1011
chr2	25078592	25078676	protein_coding	Tubb4b	exon	ENSMUSG00000036752	ProperStrand	58	chr19	8800375	8800465	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-3.5925
chr4	11446309	11446409	protein_coding	1110037F02Rik	exon	ENSMUSG00000040720	ProperStrand	32	chr4	131908689	131908740	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.1812
chr4	154441209	154441225	protein_coding	Pex10	exon	ENSMUSG00000029047	ProperStrand	3	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-11.5113
chr5	143665106	143668429	protein_coding	Actb	utr5	ENSMUSG00000029580	ProperStrand	446	chr5	74489554	74489680	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	2	-1.3875
chr11	101184494	101184584	protein_coding	Psme3	utr3	ENSMUSG00000078652	ProperStrand	17	chr4	131908273	131908353	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.5556
chr11	120422051	120422070	protein_coding	P4hb	utr3	ENSMUSG00000025130	ProperStrand	83	chr4	131908689	131908771	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-4.0582
chr13	9833563	9833652	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr3	85942714	85942778	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	3	-4.9323
chr4	132394396	132394418	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	chr17	24856620	24856684	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-2.5095
chr3	96527940	96527956	protein_coding	Polr3c	exon	ENSMUSG00000028099	NonProperStrand	75	chr5	30959821	30959837	protein_coding	4930471M23Rik	exon	ENSMUSG00000029175	NonProperStrand	7	1	-17.3461
chr5	137969423	137969523	protein_coding	Gnb2	utr3	ENSMUSG00000029713	ProperStrand	23	chr11	62416577	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-7.0660
chrX	71189010	71189042	protein_coding	Hcfc1	utr3	ENSMUSG00000031386	ProperStrand	424	chr17	23701078	23701094	protein_coding	Zfp213	utr5	ENSMUSG00000071256	ProperStrand	11	1	-12.8626
chr12	3249843	3252631	protein_coding	Rab10	exon	ENSMUSG00000020671	ProperStrand	11	chr6	134417541	134417557	protein_coding	Lrp6	exon	ENSMUSG00000030201	ProperStrand	42	1	-17.4427
chr6	144913718	144913754	Simple_repeat	(CA)n	Simple_repeat	chr6(CA)n144913728	NonProperStrand	2	chr5	147113724	147113826	protein_coding	Cdk8	utr3	ENSMUSG00000029635	ProperStrand	19	2	-inf
chr2	83693562	83693578	protein_coding	Fam171b	exon	ENSMUSG00000048388	NonProperStrand	175	chr11	6428077	6428157	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.4281
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr4	131908687	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	12	-1.6811
chr4	111656291	111656381	protein_coding	Skint7	intron	ENSMUSG00000049214	ProperStrand	3	chr5	108336937	108337017	protein_coding	Rpl5	utr3	ENSMUSG00000058558	ProperStrand	235	2	-20.9714
chr5	147084828	147084885	protein_coding	Cdk8	intron	ENSMUSG00000029635	ProperStrand	19	chr5	27919298	27919315	protein_coding	Dpp6	intron	ENSMUSG00000061576	NonProperStrand	32	1	-16.8781
chr4	18020485	18020501	protein_coding	Mmp16	exon	ENSMUSG00000028226	ProperStrand	55	chr7	52381737	52381761	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-7.7479
chr13	76341035	76341055	protein_coding	Fam81b	intron	ENSMUSG00000078966	NonProperStrand	220	chr17	24856688	24856753	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-3.9190
chr5	111185450	111185474	protein_coding	Ep400	exon	ENSMUSG00000029505	ProperStrand	176	chr15	76720846	76720862	protein_coding	Zfp7	exon	ENSMUSG00000033669	ProperStrand	15	1	-13.9794
chr7	46792965	46793043	protein_coding	Zfp619	exon	ENSMUSG00000068959	ProperStrand	9	chr1	162965560	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	4	-19.1406
chr12	86411170	86411190	protein_coding	Ylpm1	utr3	ENSMUSG00000021244	ProperStrand	100	chr11	69481334	69481433	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-2.3090
chr2	60047474	60047493	protein_coding	Baz2b	intron	ENSMUSG00000026987	NonProperStrand	12	chr4	138927648	138927685	protein_coding	C230096C10Rik	exon	ENSMUSG00000078517	ProperStrand	69	1	-16.3146
chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr9	15119967	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-1.0873
chr8	3603894	3603913	protein_coding	Camsap3	exon	ENSMUSG00000044433	ProperStrand	86	chr5	130300474	130300551	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.9146
chrX	148139541	148139557	LINE	Lx9	L1	chrXLx9148139162	NonProperStrand	4	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-14.6015
chr12	101688412	101688492	protein_coding	Ttc7b	intron	ENSMUSG00000033530	ProperStrand	49	chr13	61035772	61035862	protein_coding	Ctla2a	utr3	ENSMUSG00000044258	NonProperStrand	2	1	-inf
chr10	94149017	94149107	lincRNA	4932415G12Rik	intron	ENSMUSG00000086635	ProperStrand	2	chr16	23110930	23111010	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr2	145076803	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	chr12	110874224	110874291	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	1	-4.4663
chr18	35342146	35398392	protein_coding	Ctnna1	exon	ENSMUSG00000037815	ProperStrand	115	chr16	23110456	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-2.6983
chr12	25396588	25397526	protein_coding	Rrm2	exon	ENSMUSG00000020649	ProperStrand	65	chr6	125136468	125136558	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	1	-6.2835
chr1	95327572	95327662	protein_coding	Hdlbp	exon	ENSMUSG00000034088	ProperStrand	97	chr9	15118272	15118323	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-2.6093
chr4	118805836	118805965	protein_coding	Slc2a1	exon	ENSMUSG00000028645	ProperStrand	361	chr5	130295469	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	2	-3.5926
chr4	96553335	96553425	LINE	Lx2	L1	chr4Lx296552811	NonProperStrand	1	chr15	82979610	82979700	protein_coding	Poldip3	utr5	ENSMUSG00000041815	ProperStrand	57	1	-inf
chr13	49779609	49779669	protein_coding	Iars	intron	ENSMUSG00000037851	ProperStrand	95	chr1	162968450	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-5.1807
chr5	109109750	109109923	protein_coding	Idua	exon	ENSMUSG00000033540	ProperStrand	11	chr11	68886939	68886966	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	8	-20.2067
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr17	27649644	27649660	protein_coding	Grm4	intron	ENSMUSG00000063239	ProperStrand	147	1	-8.6102
chr3	138114032	138114232	protein_coding	Adh5	exon	ENSMUSG00000028138	ProperStrand	16	chr8	129468758	129468848	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	4	-20.2267
chr3	133150101	133150157	protein_coding	Tet2	exon	ENSMUSG00000040943	ProperStrand	192	chr11	69483190	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-0.7666
chr5	34782999	34783065	protein_coding	Fam193a	exon	ENSMUSG00000037210	ProperStrand	41	chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	1	-10.5994
chr4	56815031	56815051	protein_coding	Ikbkap	utr5	ENSMUSG00000028431	ProperStrand	44	chr10	110918550	110918640	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	7	-inf
chr4	116827688	116828211	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	chr9	15118284	15118322	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-1.0845
chr17	28725135	28725182	protein_coding	Srpk1	utr3	ENSMUSG00000004865	ProperStrand	61	chr16	23111373	23111443	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.2363
chr14	63761579	63761613	protein_coding	Ctsb	utr3	ENSMUSG00000021939	ProperStrand	48	chr10	110918638	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-3.8629
chr10	127878979	127879012	LTR	MT2A	ERVL	chr10MT2A127878865	NonProperStrand	5	chr11	69481335	69481412	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-13.4175
chr17	80526562	80526652	Simple_repeat	(GA)n	Simple_repeat	chr17(GA)n80526505	NonProperStrand	1	chr2	130459269	130459349	protein_coding	Prosapip1	utr3	ENSMUSG00000037703	NonProperStrand	10	1	-inf
chr7	115258029	115258046	LINE	L1_Mus2	L1	chr7L1_Mus2115256645	ProperStrand	12	chr4	131908835	131908901	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.9639
chr9	64023677	64023748	snoRNA	ENSMUSG00000064918_SNORD18	.	ENSMUSG00000064918	ProperStrand	370	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-1.5612
chr16	52838538	52838556	LINE	L1M4	L1	chr16L1M452838361	ProperStrand	1	chr19	8800421	8800474	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-inf
chr11	6519820	6519944	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	chr8	73419657	73419775	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	6	-1.5237
chr1	12658128	12658218	lincRNA	Gm17644	exon	ENSMUSG00000066918	NonProperStrand	37	chr10	29177010	29177090	protein_coding	Rspo3	intron	ENSMUSG00000019880	NonProperStrand	3	1	-21.0941
chr13	9833561	9833671	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr2	18508668	18508717	tRNA	tRNA1947-AsnGTT	.	436655	ProperStrand	179	3	-7.4587
chr5	77395379	77395430	protein_coding	Paics	exon	ENSMUSG00000029247	ProperStrand	78	chr8	32260335	32260359	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	5	-16.7823
chr11	83276553	83276574	protein_coding	Mmp28	utr5	ENSMUSG00000020682	NonProperStrand	6	chr3	123210854	123210876	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-6.4760
chr13	9833551	9833676	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr8	13416895	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	6	-2.3109
mmu-miR-6238	1	19	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.0626
chr7	149068323	149068413	protein_coding	Tollip	utr3	ENSMUSG00000025139	ProperStrand	19	chr10	110918549	110918629	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-5.6609
chr11	77320106	77320193	protein_coding	Git1	utr3	ENSMUSG00000011877	ProperStrand	95	chr17	35299555	35299645	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-3.9044
chr8	129841253	129841272	protein_coding	Pard3	intron	ENSMUSG00000025812	NonProperStrand	11	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-6.9253
chr16	18283302	18283319	protein_coding	Dgcr8	exon	ENSMUSG00000022718	ProperStrand	67	chr13	97877756	97877809	protein_coding	Fam169a	intron	ENSMUSG00000041817	ProperStrand	12	1	-16.3383
chr2	167036807	167036824	protein_coding	Ptgis	intron	ENSMUSG00000017969	ProperStrand	5	chr9	58077866	58078327	protein_coding	Pml	exon	ENSMUSG00000036986	ProperStrand	45	1	-18.6321
chr10	80674669	80675224	protein_coding	Atcay	exon	ENSMUSG00000034958	ProperStrand	94	chr9	120039626	120039678	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.5240
chr8	74059723	74060282	protein_coding	Bst2	exon	ENSMUSG00000046718	ProperStrand	15	chr16	23111758	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.3973
chr13	19684241	19684258	protein_coding	Epdr1	utr3	ENSMUSG00000002808	ProperStrand	46	chr5	130300513	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.9749
chr2	26767952	26768300	protein_coding	Rpl7a	exon	ENSMUSG00000062647	ProperStrand	234	chr11	68886962	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	8	-16.2521
chr7	86626535	86626562	LTR	MERVL_2A-int	ERVL	chr7MERVL_2A-int86626184	NonProperStrand	2	chr9	120037998	120038055	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	2	-inf
chr11	101427058	101427511	protein_coding	Nbr1	exon	ENSMUSG00000017119	ProperStrand	91	chr16	23111449	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.7425
chr4	141225477	141225557	SINE	B3A	B2	chr4B3A141225376	NonProperStrand	1	chr4	141225303	141225393	SINE	ID_B1	B4	chr4ID_B1141225226	ProperStrand	1	1	-inf
chr2	146660145	146660162	antisense	Gm14114	.	ENSMUSG00000087618	NonProperStrand	11	chr18	33954822	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-11.1395
chr14	70105435	70105515	protein_coding	R3hcc1	exon	ENSMUSG00000034194	ProperStrand	12	chr12	17552981	17553071	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	6	-19.3380
chr12	25393185	25393285	protein_coding	Rrm2	utr5	ENSMUSG00000020649	ProperStrand	65	chr12	112779245	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-4.6221
chr4	115484059	115484082	protein_coding	Atpaf1	utr3	ENSMUSG00000028710	ProperStrand	202	chr7	97322993	97324803	protein_coding	Picalm	exon	ENSMUSG00000039361	ProperStrand	23	2	-18.8175
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr14	31867350	31867368	protein_coding	Pbrm1	exon	ENSMUSG00000042323	ProperStrand	87	1	-3.7619
chr17	32453268	32453285	protein_coding	Akap8	exon	ENSMUSG00000024045	ProperStrand	339	chr2	26494708	26494829	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	5	-4.3551
chr4	40753248	40753267	protein_coding	B4galt1	utr3	ENSMUSG00000028413	ProperStrand	25	chr7	148634702	148634792	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	3	-13.2779
chr4	116311596	116324142	protein_coding	Akr1a1	exon	ENSMUSG00000028692	ProperStrand	35	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-5.8830
chr9	21572145	21572185	protein_coding	Kank2	utr3	ENSMUSG00000032194	ProperStrand	196	chr7	116663711	116663748	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-1.6043
chr17	25052368	25052404	protein_coding-noncoding	Mapk8ip3	utr3	ENSMUSG00000024163	ProperStrand	9	chr9	15118303	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	8	-19.8896
chr4	132284402	132284474	protein_coding	Xkr8	exon	ENSMUSG00000037752	ProperStrand	6	chr18	75161534	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	4	-18.7134
chr17	56442937	56454642	protein_coding	Uhrf1	exon	ENSMUSG00000001228	ProperStrand	229	chr16	23111375	23111470	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	6	-2.1994
chr11	70791496	70791542	protein_coding	C1qbp	utr3	ENSMUSG00000018446	ProperStrand	46	chr7	150717298	150717378	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-6.0288
chr2	29795692	29795744	protein_coding	Gle1	exon	ENSMUSG00000019715	ProperStrand	16	chr8	129468778	129468868	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	3	-16.0841
chr7	52136422	52136462	protein_coding	Med25	exon	ENSMUSG00000002968	ProperStrand	33	chr5	123133847	123133863	protein_coding	P2rx7	utr3	ENSMUSG00000029468	NonProperStrand	5	1	-18.5063
chr4	116230385	116230401	protein_coding	Gpbp1l1	utr5	ENSMUSG00000034042	NonProperStrand	106	chr11	68887040	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-3.0939
chr4	120731970	120731997	protein_coding	Zmpste24	utr3	ENSMUSG00000043207	ProperStrand	1	chr17	24665456	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-inf
chr11	55311263	55311454	protein_coding	G3bp1	exon	ENSMUSG00000018583	ProperStrand	106	chr7	116663649	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	4	-6.4524
chr14	82051197	82051287	LINE	L1Md_F2	L1	chr14L1Md_F282051166	NonProperStrand	1	chr14	82050786	82050876	LINE	L1Md_T	L1	chr14L1Md_T82050234	NonProperStrand	1	1	-inf
chr8	129468746	129468765	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	chr12	92811876	92811976	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	5	-4.6548
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr9	120037927	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	4	-2.5617
chr7	112142071	112142161	LINE	L1_Rod	L1	chr7L1_Rod112142058	ProperStrand	1	chr7	112141919	112141999	LTR	RLTR25B	ERVK	chr7RLTR25B112141437	ProperStrand	1	1	-inf
chr2	151931941	151931980	protein_coding	Srxn1	intron	ENSMUSG00000032802	ProperStrand	15	chr16	23109048	23109090	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	2	-16.0025
chr9	119253615	119255666	protein_coding	Acaa1a	exon	ENSMUSG00000036138	ProperStrand	15	chr12	88778642	88778722	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	10	-20.4379
chr12	114290175	114290191	protein_coding	Pacs2	intron	ENSMUSG00000021143	NonProperStrand	302	chr11	6428090	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-1.5175
chr5	115939531	115939585	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr5	111121066	111121126	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	3	-4.3542
chr16	33345997	33346077	SINE	B1_Mur4	Alu	chr16B1_Mur433345969	NonProperStrand	1	chr16	33345730	33345820	SINE	B2_Mm1t	B2	chr16B2_Mm1t33345646	NonProperStrand	1	1	-inf
chr11	6171396	6171496	protein_coding	Tmed4	utr3	ENSMUSG00000004394	ProperStrand	10	chr18	35716830	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-5.5279
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	1	-4.9277
chr3	88787051	88787067	protein_coding	Ash1l	exon	ENSMUSG00000028053	NonProperStrand	50	chr9	15118244	15118283	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.8047
chrX	84483703	84483730	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr17	13115738	13115789	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	2	-4.7127
chr15	27592232	27594103	protein_coding	Fam105a	exon	ENSMUSG00000056069	ProperStrand	29	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-9.2016
chr7	125889976	125890015	protein_coding	9030624J02Rik	exon	ENSMUSG00000030982	ProperStrand	18	chr6	47225593	47225609	protein_coding	Cntnap2	intron	ENSMUSG00000039419	NonProperStrand	283	1	-12.6466
chr16	90229541	90229571	protein_coding	Scaf4	utr3	ENSMUSG00000022983	ProperStrand	44	chr14	76247074	76247124	protein_coding	Tpt1	exon	ENSMUSG00000060126	ProperStrand	236	1	-11.1925
chr5	58453757	58453774	protein_coding	Pcdh7	intron	ENSMUSG00000029108	NonProperStrand	10	chr8	59992205	59992242	protein_coding	Hmgb2	exon	ENSMUSG00000054717	ProperStrand	184	1	-14.7385
chr7	6084069	6084101	protein_coding	Zfp787	exon	ENSMUSG00000046792	ProperStrand	16	chr2	130101254	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-9.2562
chr11	69218018	69218108	protein_coding	Kdm6b	exon	ENSMUSG00000018476	ProperStrand	76	chr7	148634703	148634783	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-3.5460
chr2	167836658	167836685	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	chr5	104521448	104521466	protein_coding	Sparcl1	exon	ENSMUSG00000029309	ProperStrand	16	1	-14.8169
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	106676293	106676309	protein_coding	Ssbp3	intron	ENSMUSG00000061887	ProperStrand	36	1	-5.4531
chr17	30667192	30667220	protein_coding	Btbd9	utr5	ENSMUSG00000062202	ProperStrand	31	chr11	98878342	98878381	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-7.6012
chr10	117227045	117227061	protein_coding	Nup107	exon	ENSMUSG00000052798	NonProperStrand	66	chr8	73419653	73419789	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.9596
chr2	84697517	84697534	protein_coding	Slc43a1	exon	ENSMUSG00000027075	ProperStrand	5	chr5	130300419	130300514	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-7.4021
chr9	123701794	123701822	protein_coding	Fyco1	exon	ENSMUSG00000025241	ProperStrand	31	chr10	23505152	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.2459
chr2	166631152	166631242	protein_coding	Arfgef2	utr5	ENSMUSG00000074582	ProperStrand	32	chr9	15119646	15119726	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.7682
chr4	134454269	134454303	protein_coding	Tmem50a	utr3	ENSMUSG00000028822	ProperStrand	8	chr10	39978273	39978363	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-9.5507
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	82123199	82123216	SINE	MIR3	MIR	chr11MIR382123070	NonProperStrand	8	1	-8.5166
chr1	180260460	180260753	protein_coding	Hnrnpu	exon	ENSMUSG00000039630	ProperStrand	286	chrX	132424714	132424731	protein_coding	Bhlhb9	exon	ENSMUSG00000072964	ProperStrand	11	1	-13.6504
chr11	83160327	83160353	protein_coding	Ap2b1	exon	ENSMUSG00000035152	ProperStrand	60	chr19	8798752	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	3	-11.3903
chr1	180267255	180267334	protein_coding	Hnrnpu	exon	ENSMUSG00000039630	NonProperStrand	3	chr7	29063271	29063289	protein_coding	Eid2b	utr3	ENSMUSG00000070705	NonProperStrand	1	1	-inf
chr1	184392201	184392258	protein_coding	Trp53bp2	utr3	ENSMUSG00000026510	ProperStrand	19	chr19	8798743	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-7.0771
chr12	39229089	39229108	protein_coding	Dgkb	intron	ENSMUSG00000036095	ProperStrand	19	chr5	34234244	34234262	protein_coding	Whsc1	utr5	ENSMUSG00000057406	ProperStrand	409	1	-11.8009
chr2	90235313	90235340	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	82891003	82891019	protein_coding	Ttc39b	exon	ENSMUSG00000038172	ProperStrand	78	1	-3.9658
chr1	173341933	173341949	protein_coding	Usf1	utr5	ENSMUSG00000026641	NonProperStrand	144	chr9	15119298	15119358	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-3.4536
chr13	54202573	54202594	protein_coding	Sfxn1	utr3	ENSMUSG00000021474	ProperStrand	18	chr7	116664816	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-4.7864
chr15	55090163	55090180	protein_coding	Deptor	utr3	ENSMUSG00000022419	ProperStrand	17	chr11	69483197	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.7874
chr9	78550959	78550976	protein_coding	Cd109	exon	ENSMUSG00000046186	NonProperStrand	36	chr16	23111394	23111484	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.0295
chr7	88830622	88830640	protein_coding	Homer2	intron	ENSMUSG00000025813	ProperStrand	6	chr16	23110526	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-6.9463
chr10	60075899	60075917	protein_coding	Cdh23	intron	ENSMUSG00000012819	ProperStrand	16	chr2	158182205	158182277	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	NonProperStrand	8	1	-19.0692
chr11	116797714	116797731	protein_coding	Mgat5b	intron	ENSMUSG00000043857	ProperStrand	21	chr18	33954816	33954943	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-5.5219
chr1	82439577	82439677	protein_coding	Rhbdd1	utr3	ENSMUSG00000026142	ProperStrand	22	chr3	88715214	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	4	-19.9123
chr14	37934741	37934760	protein_coding	Ghitm	utr3	ENSMUSG00000041028	NonProperStrand	11	chr16	23110914	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.6241
chr12	17552948	17553029	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr4	132394358	132394448	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	2	-2.6787
chr1	135208718	135208735	protein_coding	Golt1a	intron	ENSMUSG00000041717	ProperStrand	1	chr7	116664805	116664862	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-inf
chr2	26768381	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	chr4	131866608	131866676	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	4	-6.9820
chr16	33280779	33286088	protein_coding	Snx4	exon	ENSMUSG00000022808	ProperStrand	25	chr3	123210925	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.6093
chr8	109188149	109188188	protein_coding	Cdh1	exon	ENSMUSG00000000303	ProperStrand	283	chr17	29112776	29112851	protein_coding	Stk38	exon	ENSMUSG00000024006	ProperStrand	57	2	-16.1708
chr2	145076805	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	chr9	108512250	108512338	protein_coding	Arih2	intron	ENSMUSG00000064145	ProperStrand	9	1	-11.6017
chr5	64485819	64485836	protein_coding	Pgm1	intron	ENSMUSG00000029171	NonProperStrand	20	chr5	112865460	112865476	protein_coding	Sez6l	exon	ENSMUSG00000058153	ProperStrand	81	1	-14.9364
chr11	53924990	53925007	protein_coding	P4ha2	exon	ENSMUSG00000018906	NonProperStrand	2	chr7	117189863	117189889	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-13.6430
chr10	90432659	90432678	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	chr3	123210905	123210979	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-0.8651
chr6	17615089	17615303	protein_coding	Capza2	exon	ENSMUSG00000015733	ProperStrand	23	chr10	23505236	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-7.2788
chr9	21841260	21841276	protein_coding	Elavl3	exon	ENSMUSG00000003410	ProperStrand	3	chr1	33828651	33828669	protein_coding	Zfp451	intron	ENSMUSG00000042197	NonProperStrand	393	1	-15.9635
chr8	90674056	90674136	protein_coding	Heatr3	exon	ENSMUSG00000031657	ProperStrand	24	chr8	113424784	113424874	protein_coding	Fuk	intron	ENSMUSG00000033703	ProperStrand	18	1	-17.4813
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr9	78023109	78023219	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	3	-3.3311
chr2	120549566	120549872	protein_coding	Cdan1	exon	ENSMUSG00000027284	ProperStrand	13	chr4	131908259	131908349	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.0703
chr2	26493426	26493518	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr10	4741155	4741171	protein_coding	Myct1	utr3	ENSMUSG00000046916	ProperStrand	42	1	-6.9021
chr2	158181880	158181949	lincRNA	9430008C03Rik	intron	ENSMUSG00000085385	ProperStrand	1039	chr9	98474584	98474684	protein_coding	Copb2	intron	ENSMUSG00000032458	ProperStrand	33	1	-8.8157
chr2	76471660	76471676	protein_coding	Prkra	exon	ENSMUSG00000002731	NonProperStrand	65	chr7	148634701	148634781	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-3.8360
chr17	35991423	35991513	protein_coding	Mdc1	exon	ENSMUSG00000061607	ProperStrand	85	chr15	34370596	34370676	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-2.9188
chr4	136540918	136574047	protein_coding	Zbtb40	intron	ENSMUSG00000060862	ProperStrand	33	chr4	131908688	131908797	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	14	-19.7027
chrX	71560837	71560854	protein_coding	Fam50a	exon	ENSMUSG00000001962	ProperStrand	4	chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	1	-15.7620
chr11	3293012	3309057	protein_coding	Limk2	exon	ENSMUSG00000020451	ProperStrand	100	chr5	121655126	121655154	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.8215
chr4	120564650	120564761	protein_coding	Rims3	utr3	ENSMUSG00000032890	ProperStrand	18	chr18	35102297	35102316	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-9.0132
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr15	27832308	27832324	protein_coding	Trio	exon	ENSMUSG00000022263	ProperStrand	108	1	-7.5425
mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr12	82317769	82317785	protein_coding	Slc8a3	exon	ENSMUSG00000079055	ProperStrand	126	3	-10.6729
chr1	138178661	138178677	protein_coding	Camsap2	exon	ENSMUSG00000041570	NonProperStrand	116	chr7	106494113	106494132	protein_coding	Serpinh1	utr3	ENSMUSG00000070436	ProperStrand	9	1	-15.8838
chr2	162761205	162761272	protein_coding	Srsf6	utr3	ENSMUSG00000016921	ProperStrand	30	chr7	117190023	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.6386
chr5	140373471	140373561	LTR	MTB	MaLR	chr5MTB140373362	ProperStrand	1	chr5	140373294	140373384	SINE	PB1D7	Alu	chr5PB1D7140373270	NonProperStrand	1	1	-inf
chr11	51464192	51464208	protein_coding	N4bp3	utr5	ENSMUSG00000001053	NonProperStrand	41	chr9	67607677	67607693	protein_coding	C2cd4b	exon	ENSMUSG00000091956	ProperStrand	1	1	-inf
chr11	77317941	77317963	protein_coding	Git1	exon	ENSMUSG00000011877	ProperStrand	95	chr7	146684406	146684425	protein_coding	Inpp5a	intron	ENSMUSG00000025477	ProperStrand	166	1	-10.3481
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr2	158205275	158205405	snoRNA	ENSMUSG00000064585_SNORA71	.	ENSMUSG00000064585	ProperStrand	418	2	-7.8844
chr8	49322057	49322111	protein_coding	Odz3	exon	ENSMUSG00000031561	ProperStrand	56	chr19	8963056	8963156	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.3909
chr7	125326079	125326275	protein_coding	Smg1	exon	ENSMUSG00000030655	ProperStrand	70	chr14	33005063	33005139	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-3.7054
chr12	36219400	36219416	protein_coding	Ahr	utr5	ENSMUSG00000019256	NonProperStrand	64	chr1	88252836	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-6.5123
chr9	30235085	30235102	protein_coding	Snx19	exon	ENSMUSG00000031993	ProperStrand	353	chr18	35714144	35714260	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	5	-5.0177
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr1	127332183	127332201	Low_complexity	C-rich	Low_complexity	chr1C-rich127332120	NonProperStrand	6	1	-12.5473
chr14	79867109	79867150	protein_coding	Wbp4	exon	ENSMUSG00000022023	ProperStrand	9	chr5	130300471	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-6.1422
chr7	29137555	29137655	protein_coding	Rps16	exon	ENSMUSG00000037563	ProperStrand	191	chr11	68886998	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-2.0853
chr5	77738902	77738918	protein_coding	Noa1	exon	ENSMUSG00000036285	ProperStrand	147	chr2	169944691	169944772	protein_coding	Zfp217	exon	ENSMUSG00000052056	ProperStrand	79	1	-10.9617
chr9	89987224	89988619	protein_coding	Morf4l1	exon	ENSMUSG00000062270	ProperStrand	33	chr9	120038609	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	3	-10.1073
chr14	19044303	19044383	protein_coding	Nr1d2	exon	ENSMUSG00000021775	ProperStrand	33	chr9	15119676	15119766	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	21	-19.4637
chr3	137849424	137849440	protein_coding	4930579F01Rik	utr5	ENSMUSG00000012042	NonProperStrand	156	chr9	15119631	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.1469
chr17	65932060	65932079	protein_coding	Vapa	exon	ENSMUSG00000024091	ProperStrand	24	chr10	90581034	90581140	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	6	-20.5883
chr5	117733385	117733418	protein_coding	Pebp1	exon	ENSMUSG00000032959	ProperStrand	54	chr14	33788363	33788380	protein_coding	Wdfy4	exon	ENSMUSG00000051506	ProperStrand	14	1	-16.5633
chr4	131908687	131908797	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	chr7	127979052	127979074	tRNA	tRNA861-LeuTAG	.	341467	ProperStrand	49	3	-4.4474
chr11	3246329	3247088	protein_coding	Limk2	exon	ENSMUSG00000020451	ProperStrand	100	chr1	162966815	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-5.2586
chr8	89165453	89165482	protein_coding	Lonp2	exon	ENSMUSG00000047866	ProperStrand	13	chr16	23111695	23111785	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.6795
chr10	18393547	18393563	protein_coding	D10Bwg1379e	intron	ENSMUSG00000019852	NonProperStrand	120	chr13	29045285	29045351	protein_coding	Sox4	utr5	ENSMUSG00000076431	ProperStrand	73	1	-11.5267
chr9	114383109	114383143	protein_coding	Glb1	exon	ENSMUSG00000045594	ProperStrand	67	chr11	69483231	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.2638
chr5	74834769	74834791	protein_coding	Scfd2	intron	ENSMUSG00000062110	ProperStrand	4	chr17	35087897	35087944	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-10.8192
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr8	41570003	41570019	protein_coding	Zdhhc2	utr3	ENSMUSG00000039470	NonProperStrand	85	2	-8.5780
chr1	37898095	37898111	protein_coding	Tsga10	exon	ENSMUSG00000060771	ProperStrand	79	chr8	73419679	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.6439
chr19	8799828	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	chr10	39978369	39978473	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	14	-5.8437
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	112758435	112758451	protein_coding	Tfip11	exon	ENSMUSG00000029345	ProperStrand	111	1	-3.3143
chr7	87226949	87232915	protein_coding	Zfp710	intron	ENSMUSG00000048897	ProperStrand	229	chr5	130300420	130300556	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-1.3097
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr17	39985565	39985655	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	7	-21.4315
chr16	5019099	5019426	protein_coding	Glyr1	exon	ENSMUSG00000022536	ProperStrand	60	chr4	131865966	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.7679
chr11	103098864	103098881	protein_coding	Map3k14	exon	ENSMUSG00000020941	NonProperStrand	18	chr8	87525135	87525238	protein_coding	Hook2	exon	ENSMUSG00000052566	ProperStrand	204	1	-13.3062
chr11	120818225	120818266	protein_coding	Slc16a3	exon	ENSMUSG00000025161	ProperStrand	98	chr10	23505148	23505210	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-1.3620
chr14	87056388	87171935	protein_coding	Diap3	utr3	ENSMUSG00000022021	ProperStrand	15	chr10	41644311	41644329	protein_coding	Armc2	exon	ENSMUSG00000071324	ProperStrand	281	1	-13.0397
chr1	192712615	192712631	protein_coding	Rps6kc1	exon	ENSMUSG00000089872	ProperStrand	241	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-2.0713
chr4	108673447	108673463	protein_coding	Nrd1	exon	ENSMUSG00000053510	ProperStrand	76	chr11	97642952	97643087	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.0775
chr7	134168830	134168846	protein_coding	Maz	exon	ENSMUSG00000030678	ProperStrand	42	chr12	60141325	60141415	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	2	-12.0925
chr6	115757156	115757890	protein_coding	Rpl32	exon	ENSMUSG00000057841	ProperStrand	137	chr5	74489622	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-2.3099
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr2	164460516	164460532	protein_coding	Wfdc16	utr3	ENSMUSG00000070530	ProperStrand	15	1	-13.2508
chr11	68936358	68936374	protein_coding	Hes7	exon	ENSMUSG00000023781	NonProperStrand	66	chr17	71990923	71990976	snoRNA	ENSMUSG00000092713_CT010429.1	.	ENSMUSG00000092713	ProperStrand	182	1	-10.8955
chr17	35264555	35264625	protein_coding	D17H6S53E	exon	ENSMUSG00000043311	ProperStrand	7	chrX	34622930	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	5	-inf
chr9	21483586	21490476	protein_coding	Smarca4	exon	ENSMUSG00000032187	ProperStrand	196	chr11	98878372	98878454	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-3.9993
chr17	4082593	4082673	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr1	12657894	12657984	lincRNA	Gm17644	exon	ENSMUSG00000066918	NonProperStrand	37	1	-10.9401
chr11	97479759	97483938	lincRNA	2410003L11Rik	exon	ENSMUSG00000085860	ProperStrand	9	chr18	35716789	35716879	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-9.5374
chr11	120678003	120678176	protein_coding	Fasn	exon	ENSMUSG00000025153	ProperStrand	298	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-0.8019
chr3	95432633	95432673	protein_coding	Ensa	utr3	ENSMUSG00000038619	ProperStrand	4	chr16	23110528	23110563	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-7.8518
chr14	29459918	29460008	LTR	ORR1D1	MaLR	chr14ORR1D129459860	ProperStrand	1	chr13	24117717	24117797	protein_coding	Lrrc16a	exon	ENSMUSG00000021338	NonProperStrand	8	1	-inf
chr4	45660903	45660983	LTR	MER67A	ERV1	chr4MER67A45660841	NonProperStrand	1	chr4	45661085	45661175	SINE	ID_B1	B4	chr4ID_B145660979	ProperStrand	1	1	-inf
chr11	84870682	84870699	protein_coding	Usp32	intron	ENSMUSG00000000804	ProperStrand	45	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.2312
chr2	42615678	42615697	LINE	Lx	L1	chr2Lx42615421	NonProperStrand	1	chr9	107516734	107516800	protein_coding	Gnai2	utr3	ENSMUSG00000032562	ProperStrand	29	1	-inf
chr11	104303054	104303077	protein_coding	1700081L11Rik	utr5	ENSMUSG00000018412	ProperStrand	73	chr5	108334257	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	4	-14.1348
chr5	3569622	3569672	protein_coding	Fam133b	utr3	ENSMUSG00000058503	ProperStrand	3	chr4	131865381	131865471	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	3	-inf
chr9	65044377	65044417	snRNA	ENSMUSG00000075763_U5	.	ENSMUSG00000075763	ProperStrand	216	chr11	69481333	69481378	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-1.1448
chr17	35458862	35458952	protein_coding	H2-Q1	intron	ENSMUSG00000079507	NonProperStrand	1	chr17	35532176	35532266	pseudogene	H2-Q5	.	ENSMUSG00000055413	NonProperStrand	2	1	-inf
chr12	86136022	86136038	protein_coding	Ltbp2	exon	ENSMUSG00000002020	ProperStrand	14	chr7	16524137	16524159	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	1	-12.6811
chr17	47066752	47066803	protein_coding	Ubr2	utr3	ENSMUSG00000023977	ProperStrand	172	chr10	23505559	23505621	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-5.4737
chr17	30896629	30896681	protein_coding	Dnahc8	exon	ENSMUSG00000033826	ProperStrand	246	chr1	162967491	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	3	-3.6062
chr11	77994801	77994824	snoRNA	ENSMUSG00000064540_Snord42a	.	ENSMUSG00000064540	ProperStrand	142	chr2	144087324	144087449	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-4.8625
chr2	26768401	26768433	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	chr11	51551276	51551335	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	2	-1.6812
chr4	43505657	43505682	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr15	89133924	89134277	protein_coding	Sbf1	exon	ENSMUSG00000036529	ProperStrand	85	1	-2.4608
chr13	89324398	89324414	protein_coding	Edil3	exon	ENSMUSG00000034488	NonProperStrand	12	chrX	71517831	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	2	-15.5925
chr11	4956158	4956174	protein_coding	Gas2l1	utr3	ENSMUSG00000034201	ProperStrand	33	chr9	64023228	64023269	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	1	-9.6485
chr18	64671298	64671334	protein_coding	Nars	exon	ENSMUSG00000024587	ProperStrand	97	chr5	121655026	121655116	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.8751
chr16	21795988	21796032	lincRNA	1300002E11Rik	exon	ENSMUSG00000086651	ProperStrand	2	chr16	23110546	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-9.6327
chr4	127003252	127003330	protein_coding	Gjb3	exon	ENSMUSG00000042367	ProperStrand	4	chr19	8799036	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-11.4702
chr3	90197173	90197671	protein_coding	Ints3	exon	ENSMUSG00000027933	ProperStrand	87	chr4	131865855	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.2262
chr7	52378396	52378481	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	chr1	162967511	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	5	-2.4457
chr2	179322380	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr8	114244476	114244615	protein_coding	Bcar1	intron	ENSMUSG00000031955	ProperStrand	44	3	-21.2426
chr6	83111671	83111687	protein_coding	1700003E16Rik	exon	ENSMUSG00000030030	ProperStrand	352	chr10	90432660	90432676	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	1	-7.0891
chr3	54876966	54876987	LINE	L1_Mur3	L1	chr3L1_Mur354876860	NonProperStrand	1	chr11	97642952	97643055	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-inf
chr3	68840046	68840136	protein_coding	Trim59	utr3	ENSMUSG00000034317	ProperStrand	22	chr19	8963097	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-6.9051
chr15	99530263	99530363	protein_coding	Accn2	utr3	ENSMUSG00000023017	NonProperStrand	7	chr1	88252836	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	NonProperStrand	2	1	-inf
chr1	181684012	181684032	protein_coding	Ahctf1	exon	ENSMUSG00000026491	ProperStrand	39	chr1	141067285	141067303	protein_coding	Dennd1b	utr3	ENSMUSG00000056268	NonProperStrand	6	1	-18.2987
chr7	132812370	132812470	protein_coding	Gtf3c1	exon	ENSMUSG00000032777	ProperStrand	161	chr9	44143264	44143340	protein_coding	H2afx	utr3	ENSMUSG00000049932	ProperStrand	137	1	-9.6761
chr1	152268927	152269668	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	chr17	24665420	24665496	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-1.1599
chr2	22444464	22444818	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	chr4	131865380	131865508	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	25	-21.0494
chr2	44289323	44289341	SINE	B4	B4	chr2B444289292	NonProperStrand	1	chr9	78328405	78328462	protein_coding	Eef1a1	utr5	ENSMUSG00000037742	ProperStrand	1990	1	-inf
chr9	69264848	69264920	protein_coding	Narg2	exon	ENSMUSG00000032235	ProperStrand	4	chr13	49627837	49627869	protein_coding	Ecm2	utr3	ENSMUSG00000043631	ProperStrand	3	3	-inf
chr18	16933117	16966848	protein_coding	Cdh2	exon	ENSMUSG00000024304	ProperStrand	71	chr7	117189932	117189972	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.0284
chr5	93611899	93611924	protein_coding	Ccni	utr3	ENSMUSG00000063015	ProperStrand	43	chr15	34370545	34370632	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	3	-10.1339
chr12	32172521	32172560	protein_coding	Cbll1	exon	ENSMUSG00000020659	ProperStrand	19	chr15	31223578	31223594	protein_coding	Ankrd33b	utr3	ENSMUSG00000022237	ProperStrand	55	1	-15.7982
chr6	86475492	86475582	protein_coding	Pcbp1	exon	ENSMUSG00000051695	ProperStrand	108	chr3	123210895	123210975	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.1886
chrX	11617586	11618649	protein_coding	Bcor	exon	ENSMUSG00000040363	ProperStrand	20	chr5	93635131	93635148	protein_coding	Ccni	utr5	ENSMUSG00000063015	ProperStrand	43	2	-21.8290
chr8	72613823	72613839	protein_coding	Hapln4	utr3	ENSMUSG00000007594	NonProperStrand	85	chr11	106362604	106362635	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-6.7127
chrX	99515192	99515215	lincRNA	Gm14858	intron	ENSMUSG00000085568	ProperStrand	4	chr12	17553062	17553090	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-10.7041
chr5	45401467	45401547	LINE	L1Md_F2	L1	chr5L1Md_F245401408	NonProperStrand	7	chr7	122138588	122138678	LINE	L1Md_F2	L1	chr7L1Md_F2122137919	NonProperStrand	1	1	-inf
chr18	82662186	82662202	protein_coding	Mbp	intron	ENSMUSG00000041607	NonProperStrand	185	chr5	121655015	121655098	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-1.7991
chr16	11144161	11144251	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr3	34549596	34549684	protein_coding	Sox2	exon	ENSMUSG00000074637	NonProperStrand	6	2	-19.1083
chr7	75356892	75356909	protein_coding	Igf1r	exon	ENSMUSG00000005533	NonProperStrand	9	chr11	106362638	106362674	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-11.2794
chr15	3722437	3722455	LINE	Lx4B	L1	chr15Lx4B3722405	ProperStrand	16	chr4	131908380	131908453	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	1	-9.9320
chr2	31801444	31801460	protein_coding	Lamc3	utr3	ENSMUSG00000026840	NonProperStrand	14	chr15	79913288	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-10.4988
chr17	35972878	35972927	protein_coding	Tubb5	exon	ENSMUSG00000001525	ProperStrand	624	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-2.5037
chr10	55966378	55966468	LINE	L1_Mus3	L1	chr10L1_Mus355966252	NonProperStrand	1	chr13	67807503	67807593	protein_coding	Zfp71-rs1	utr3	ENSMUSG00000071281	NonProperStrand	7	1	-inf
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr9	83678799	83681878	protein_coding	Elovl4	exon	ENSMUSG00000032262	ProperStrand	159	1	-5.0145
chr10	11421850	11421869	LTR	RLTR10-int	ERVK	chr10RLTR10-int11421241	NonProperStrand	4	chr1	71674631	71674982	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	1	-13.5018
chr8	90848703	90848719	protein_coding	Adcy7	exon	ENSMUSG00000031659	ProperStrand	19	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-5.8137
chr4	124600357	124600454	protein_coding	Cdca8	intron	ENSMUSG00000028873	ProperStrand	41	chr1	22738525	22738546	protein_coding	Rims1	intron	ENSMUSG00000041670	ProperStrand	21	1	-16.1970
chr6	145765029	145765092	protein_coding	Rassf8	exon	ENSMUSG00000030259	ProperStrand	23	chr9	15119735	15119760	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.3979
chr16	43168344	43168371	protein_coding	Zbtb20	intron	ENSMUSG00000022708	NonProperStrand	13	chr16	57391626	57391707	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	1	-13.4223
chr18	20904176	20904266	protein_coding	B4galt6	utr5	ENSMUSG00000056124	ProperStrand	31	chr2	144091736	144091816	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	ProperStrand	549	1	-10.2138
chr4	116875159	116875249	snRNA	ENSMUSG00000070228_U5	.	ENSMUSG00000070228	ProperStrand	131	chr16	23111743	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	5	-5.5108
chr9	122075466	122075482	protein_coding	Snrk	exon	ENSMUSG00000038145	NonProperStrand	97	chrX	103394997	103395031	protein_coding	Pgk1	exon	ENSMUSG00000062070	ProperStrand	484	1	-8.1725
chr1	141319671	141319687	protein_coding	Zbtb41	utr5	ENSMUSG00000033964	NonProperStrand	145	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-9.9149
chr2	179322380	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr13	23528215	23528284	tRNA	tRNA103-LysCTT	.	360177	ProperStrand	180	1	-9.0105
chr5	5146823	5146841	protein_coding	Cdk14	intron	ENSMUSG00000028926	ProperStrand	20	chr6	93742378	93742394	protein_coding	Magi1	exon	ENSMUSG00000045095	ProperStrand	106	1	-14.3981
chr17	47626553	47626570	protein_coding	Taf8	utr3	ENSMUSG00000023980	ProperStrand	25	chr17	13112510	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-6.2962
chr18	10052132	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chrX	133310481	133310497	protein_coding	Glra4	exon	ENSMUSG00000018595	ProperStrand	1	1	-inf
chr17	36097663	36100551	protein_coding	Abcf1	exon	ENSMUSG00000038762	ProperStrand	206	chr11	97642956	97643082	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-1.4637
chr19	29690316	29691077	protein_coding	Ermp1	exon	ENSMUSG00000046324	ProperStrand	103	chr11	106362340	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	2	-7.9215
chr2	93784059	93784076	LTR	MTEa	MaLR	chr2MTEa93783777	NonProperStrand	50	chr16	23111690	23111718	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.1991
chr11	60520054	60527505	protein_coding	Llgl1	utr3	ENSMUSG00000020536	ProperStrand	20	chr16	23110981	23111010	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-4.8132
chr4	57706987	57707003	protein_coding	Palm2	intron	ENSMUSG00000090053	NonProperStrand	187	chr19	8799581	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-4.5504
chr17	35088263	35088300	processed_transcript	1110038B12Rik	.	ENSMUSG00000092203	ProperStrand	126	chr7	51505242	51505308	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	1	-6.6766
chr17	35972368	35972392	protein_coding	Tubb5	exon	ENSMUSG00000001525	ProperStrand	624	chr17	26360445	26360572	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	1	-5.3890
chr13	99018400	99018465	protein_coding	Utp15	utr3	ENSMUSG00000041747	ProperStrand	19	chr7	116663738	116663760	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.6387
chr15	11912498	11912522	protein_coding	Sub1	utr3	ENSMUSG00000022205	ProperStrand	4	chr16	23111452	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-10.7545
chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	chr10	79593325	79593391	protein_coding	Dos	utr3	ENSMUSG00000035640	ProperStrand	45	2	-15.4582
chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	chr7	6084058	6084119	protein_coding	Zfp787	exon	ENSMUSG00000046792	ProperStrand	16	1	-10.8584
chr16	15624671	15624696	protein_coding	Mcm4	utr3	ENSMUSG00000022673	ProperStrand	51	chr10	90581034	90581087	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-5.1219
chr5	85963140	85963161	LINE	Lx2B	L1	chr5Lx2B85962279	ProperStrand	1	chr11	106362304	106362378	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-inf
chr2	118997714	118997732	protein_coding	Gchfr	exon	ENSMUSG00000046814	ProperStrand	6	chr9	15119647	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	4	-19.1682
chr7	112786355	112786428	protein_coding	Arfip2	exon	ENSMUSG00000030881	ProperStrand	191	chr19	8800091	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	5	-18.6460
chr10	3308858	3308880	protein_coding	Oprm1	utr3	ENSMUSG00000000766	ProperStrand	18	chr3	55738487	55738535	protein_coding	Nbea	utr5	ENSMUSG00000027799	ProperStrand	53	1	-15.9810
chr13	9833567	9833656	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr9	110094181	110094201	protein_coding	Smarcc1	intron	ENSMUSG00000032481	NonProperStrand	5	1	-10.0546
chr2	146660146	146660163	antisense	Gm14114	.	ENSMUSG00000087618	NonProperStrand	11	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-10.0359
chr9	28982468	28982486	protein_coding	Ntm	intron	ENSMUSG00000059974	ProperStrand	49	chr4	131865871	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.0906
chr18	35953150	35953179	protein_coding	Ube2d2	exon	ENSMUSG00000091896	ProperStrand	20	chr10	23505152	23505253	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-5.2605
chr18	35716764	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	chr12	60774055	60774110	snoRNA	ENSMUSG00000077603_SNORA3	.	ENSMUSG00000077603	ProperStrand	185	4	-3.3671
chr17	54386329	54386419	LINE	L1_Rod	L1	chr17L1_Rod54386239	ProperStrand	1	chr17	54386127	54386217	LTR	RMER17C	ERVK	chr17RMER17C54386130	ProperStrand	1	1	-inf
chrX	71516334	71517001	protein_coding	Rpl10	utr5	ENSMUSG00000008682	ProperStrand	71	chr18	60762105	60762121	protein_coding	Synpo	exon	ENSMUSG00000043079	NonProperStrand	8	1	-16.9821
chr19	10703613	10703703	protein_coding	Ddb1	utr3	ENSMUSG00000024740	ProperStrand	304	chr4	131865380	131865460	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-1.2721
chr4	135873052	135873072	protein_coding	Hnrnpr	exon	ENSMUSG00000066037	ProperStrand	15	chr10	89112750	89112796	protein_coding	Scyl2	exon	ENSMUSG00000069539	ProperStrand	7	1	-inf
chr11	56932234	56932250	protein_coding	Gria1	intron	ENSMUSG00000020524	NonProperStrand	9	chr9	64022855	64022877	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-11.9052
chr16	90938091	90938162	protein_coding	Synj1	utr3	ENSMUSG00000022973	ProperStrand	16	chr1	162967489	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	3	-14.0900
chr11	120671476	120671544	protein_coding	Fasn	exon	ENSMUSG00000025153	ProperStrand	298	chr13	23843358	23843431	protein_coding	Hist1h2ab	utr3	ENSMUSG00000061615	ProperStrand	7	1	-14.5353
chr14	87439348	87439366	protein_coding	Diap3	intron	ENSMUSG00000022021	ProperStrand	15	chr7	116663633	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-5.1056
chr7	52220597	52220616	protein_coding	Cpt1c	exon	ENSMUSG00000007783	ProperStrand	94	chr4	133276642	133276682	protein_coding	Arid1a	exon	ENSMUSG00000007880	ProperStrand	465	1	-8.3148
chr18	36885433	36885449	protein_coding	Cd14	exon	ENSMUSG00000051439	ProperStrand	65	chr17	27771039	27771092	protein_coding	Rps10	exon	ENSMUSG00000052146	ProperStrand	94	1	-12.2498
chr7	99639802	99639822	LINE	Lx6	L1	chr7Lx699639344	NonProperStrand	1	chr10	23505149	23505239	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-inf
chr2	171894358	171894375	LINE	Lx8	L1	chr2Lx8171894075	ProperStrand	5	chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	1	-18.0401
chr1	33858188	33858278	protein_coding	Zfp451	utr3	ENSMUSG00000042197	ProperStrand	17	chr3	88497852	88497932	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-10.0095
chrX	103395895	103395954	protein_coding	Pgk1	intron	ENSMUSG00000062070	ProperStrand	484	chr5	130295421	130295511	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	5	-8.2211
chr11	102704684	102705475	protein_coding	Eftud2	exon	ENSMUSG00000020929	ProperStrand	86	chr11	60001911	60001927	protein_coding	Rai1	exon	ENSMUSG00000062115	NonProperStrand	81	3	-inf
chr2	28528316	28528366	protein_coding	Tsc1	exon	ENSMUSG00000026812	ProperStrand	29	chr11	69483136	69483192	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.7582
chr14	71169879	71169897	protein_coding	Dok2	intron	ENSMUSG00000022102	NonProperStrand	1	chr5	115939562	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-inf
chr18	36885433	36885449	protein_coding	Cd14	exon	ENSMUSG00000051439	ProperStrand	65	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-5.6854
chr1	88426331	88426548	protein_coding	Ptma	exon	ENSMUSG00000026238	ProperStrand	385	chr9	64024466	64024508	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	2	-7.7911
chr5	21244804	21245868	protein_coding	Pmpcb	exon	ENSMUSG00000029017	ProperStrand	16	chr19	8963026	8963083	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.7073
chr15	102240067	102240118	protein_coding	Sp1	exon	ENSMUSG00000001280	ProperStrand	124	chr18	35716834	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-3.4222
chr15	81825205	81828569	protein_coding	Pppde2	exon	ENSMUSG00000022472	ProperStrand	12	chr11	106362338	106362378	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-9.0897
chr13	38198753	38198769	Simple_repeat	(CACGT)n	Simple_repeat	chr13(CACGT)n38198757	NonProperStrand	1	chr13	23623045	23623099	protein_coding	Hist1h4h	exon	ENSMUSG00000060981	ProperStrand	30	1	-inf
chr1	193420798	193420836	protein_coding	Ints7	exon	ENSMUSG00000037461	ProperStrand	108	chr3	108357255	108357317	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-3.4381
chr1	155068806	155070800	protein_coding	Lamc1	exon	ENSMUSG00000026478	ProperStrand	239	chr2	29014439	29014455	protein_coding	Setx	exon	ENSMUSG00000043535	ProperStrand	187	1	-8.2675
chr8	107887447	107887470	protein_coding	Slc9a5	intron	ENSMUSG00000014786	ProperStrand	26	chr11	68886928	68887018	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-5.7674
chr19	3593426	3593516	protein_coding	Lrp5	intron	ENSMUSG00000024913	ProperStrand	145	chr11	69481399	69481479	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-1.7134
chr9	68505392	69234464	protein_coding	Rora	intron	ENSMUSG00000032238	ProperStrand	25	chr4	131908236	131908340	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-10.1622
chr6	124810680	124810696	protein_coding	Gpr162	exon	ENSMUSG00000038390	NonProperStrand	40	chr3	68889178	68889202	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-4.0090
chr18	61653925	61653941	protein_coding	Arhgef37	utr3	ENSMUSG00000045094	ProperStrand	1	chr12	88778746	88778768	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-inf
chr6	122679856	122679946	protein_coding	Slc2a3	utr3	ENSMUSG00000003153	ProperStrand	682	chr14	20587989	20588069	protein_coding	Nid2	exon	ENSMUSG00000021806	ProperStrand	372	1	-4.8600
chr16	30333973	30333993	protein_coding	Atp13a3	exon	ENSMUSG00000022533	ProperStrand	45	chr15	79913288	79913343	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-6.9347
chr11	120422056	120422107	protein_coding	P4hb	utr3	ENSMUSG00000025130	ProperStrand	83	chr2	4974190	4974207	protein_coding	Optn	exon	ENSMUSG00000026672	ProperStrand	451	1	-8.6242
chr18	73824463	73824551	protein_coding	Smad4	intron	ENSMUSG00000024515	ProperStrand	51	chr19	8798516	8798553	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-5.5288
chr6	140602524	140602551	protein_coding	Aebp2	utr3	ENSMUSG00000030232	ProperStrand	34	chr19	8963085	8963204	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.2720
chr7	59152633	59152702	protein_coding	Gas2	exon	ENSMUSG00000030498	ProperStrand	10	chr7	117190023	117190062	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-6.8419
chr19	32464273	32464289	lincRNA	2700046G09Rik	exon	ENSMUSG00000024893	ProperStrand	59	chr7	140925892	140925929	protein_coding	Dhx32	exon	ENSMUSG00000030986	ProperStrand	100	1	-12.3217
chr1	153765952	153765970	protein_coding	1700025G04Rik	intron	ENSMUSG00000032666	NonProperStrand	35	chr13	49779667	49779731	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-8.0916
chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-3.2445
chr5	122110870	122110886	protein_coding	Brap	utr5	ENSMUSG00000029458	ProperStrand	36	chr16	23111388	23111478	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.0295
chr10	80291243	80291703	protein_coding	Oaz1	exon	ENSMUSG00000035242	ProperStrand	49	chr16	23110455	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-7.2925
chr19	45652387	45652428	protein_coding	Dpcd	utr3	ENSMUSG00000041035	ProperStrand	3	chr16	23111767	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-13.4294
chr16	42737661	42737677	lincRNA	4932412D23Rik	exon	ENSMUSG00000075070	ProperStrand	4	chr1	194762187	194762247	protein_coding	Syt14	intron	ENSMUSG00000016200	ProperStrand	10	1	-19.3291
chr7	104022282	104022298	protein_coding	Odz4	exon	ENSMUSG00000048078	ProperStrand	93	chrX	34622905	34623018	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-2.4035
mmu-miR-6240	0	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr10	110918548	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	15	-2.1197
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr7	25397593	25397611	protein_coding	Phldb3	exon	ENSMUSG00000074277	ProperStrand	25	1	-10.6950
chr2	181450622	181451208	protein_coding	Oprl1	exon	ENSMUSG00000027584	ProperStrand	32	chr6	115757998	115758098	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-6.7146
chr5	76659331	76659347	protein_coding	Clock	exon	ENSMUSG00000029238	NonProperStrand	64	chr16	23111372	23111451	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-2.2756
chr8	72613823	72613839	protein_coding	Hapln4	utr3	ENSMUSG00000007594	NonProperStrand	85	chr19	8963052	8963152	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.7161
chr4	131908362	131908443	lincRNA	Gm17300	exon	ENSMUSG00000091021	ProperStrand	109	chr4	131865855	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	NonProperStrand	39	1	-12.9834
chr17	22525491	22525581	LINE	Lx4B	L1	chr17Lx4B22524374	NonProperStrand	1	chr17	22525795	22525875	LINE	Lx5	L1	chr17Lx522525796	NonProperStrand	1	1	-inf
chr6	83111671	83111687	protein_coding	1700003E16Rik	exon	ENSMUSG00000030030	ProperStrand	352	chr6	6512975	6513009	protein_coding	Shfm1	intron	ENSMUSG00000042541	ProperStrand	8	1	-13.9057
chr2	32818866	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	chr13	90238619	90238719	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	1	-1.3553
chr11	116535931	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr15	12763890	12763931	protein_coding	Drosha	exon	ENSMUSG00000022191	ProperStrand	163	1	-3.9873
chr12	114155062	114155089	protein_coding	Jag2	exon	ENSMUSG00000002799	ProperStrand	28	chr8	98264635	98264829	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	1	-11.5304
chrX	83437137	83437153	protein_coding	Nr0b1	utr5	ENSMUSG00000025056	ProperStrand	37	chr2	49344248	49344311	protein_coding	Epc2	exon	ENSMUSG00000069495	ProperStrand	15	1	-17.1054
chr11	119159161	119161201	protein_coding	Eif4a3	exon	ENSMUSG00000025580	ProperStrand	14	chr16	23111378	23111458	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.7143
chr8	69904122	69904138	LTR	RMER13B	ERVK	chr8RMER13B69903872	ProperStrand	9	chr11	106874217	106874254	tRNA	tRNA945-ArgCCG	.	1941269	ProperStrand	133	1	-15.5747
chr3	60433596	60433617	protein_coding	Mbnl1	utr3	ENSMUSG00000027763	ProperStrand	9	chr8	73419657	73419725	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-15.9644
chr15	12066191	12066236	protein_coding	Zfr	exon	ENSMUSG00000022201	ProperStrand	48	chr5	130300495	130300555	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.8991
chr10	42576608	42576644	LTR	ORR1A3	MaLR	chr10ORR1A342576615	ProperStrand	14	chr16	23110959	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.2008
chr10	75399145	75400106	protein_coding	Chchd10	exon	ENSMUSG00000049422	ProperStrand	140	chr1	162967506	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-2.0047
chr6	107738191	107738208	Other	RMER1B	Other	chr6RMER1B107738112	ProperStrand	29	chr9	64024466	64024515	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	1	-9.8303
chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	chr14	33005038	33005139	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	2	-1.1765
chr12	85350481	85350499	protein_coding	Acot1	utr5	ENSMUSG00000072949	ProperStrand	72	chr5	74489597	74489668	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-3.4409
chr19	8798740	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	chr9	64023228	64023274	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	3	-2.6529
chr10	75226899	75226915	protein_coding	Cabin1	utr5	ENSMUSG00000020196	ProperStrand	62	chr9	15118296	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	4	-11.4601
chr11	62366306	62366406	protein_coding	Ubb	exon	ENSMUSG00000019505	ProperStrand	32	chr6	115757990	115758056	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-6.7146
chr10	128061669	128062329	protein_coding	Rps26	exon	ENSMUSG00000025362	ProperStrand	67	chr4	131866163	131866243	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-3.4615
chr15	9032794	9033097	protein_coding	1110020G09Rik	exon	ENSMUSG00000022253	ProperStrand	15	chr7	52096726	52096742	protein_coding	Tbc1d17	exon	ENSMUSG00000038520	ProperStrand	20	1	-18.2333
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr1	192712615	192712631	protein_coding	Rps6kc1	exon	ENSMUSG00000089872	ProperStrand	241	1	-7.6503
chr7	119918960	119918980	protein_coding	Tead1	intron	ENSMUSG00000055320	NonProperStrand	41	chr5	130300463	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-8.0851
chr9	88345623	88345652	protein_coding	Syncrip	utr3	ENSMUSG00000032423	ProperStrand	35	chr19	8963062	8963181	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	4	-11.0625
chr12	55835612	55835702	snRNA	ENSMUSG00000075960_U1	.	ENSMUSG00000075960	ProperStrand	210	chr7	118219704	118219740	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	6	-12.1050
chr4	56916321	56916409	protein_coding-noncoding	D730040F13Rik	utr3	ENSMUSG00000055296	ProperStrand	5	chr4	131865853	131865943	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-10.8861
chr3	113827103	113827119	protein_coding	Col11a1	utr3	ENSMUSG00000027966	NonProperStrand	139	chr17	39985619	39985665	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-4.3077
chr16	27426702	27426758	protein_coding	Ccdc50	intron	ENSMUSG00000038127	ProperStrand	10	chr18	35716830	35716860	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-9.1880
chr2	158182155	158182180	lincRNA	9430008C03Rik	intron	ENSMUSG00000085385	ProperStrand	1039	chr11	69483136	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	20	-8.5881
chr8	13876169	13876226	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	chr13	90238585	90238631	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	1	-2.7110
chr9	82853158	82853311	protein_coding	Phip	exon	ENSMUSG00000032253	ProperStrand	43	chr7	117166722	117166812	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-5.4639
chr11	6520313	6520365	protein_coding-noncoding	Tbrg4	utr3	ENSMUSG00000000384	ProperStrand	7	chr14	76247720	76247821	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-8.4963
chr11	43495518	43495534	protein_coding	Pwwp2a	utr5	ENSMUSG00000044950	NonProperStrand	18	chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	1	-11.2027
chr6	144365069	144365085	protein_coding	Sox5	intron	ENSMUSG00000041540	ProperStrand	34	chr16	23111447	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-3.8359
chr1	154685831	154685908	protein_coding	Smg7	utr3	ENSMUSG00000042772	ProperStrand	88	chr4	116826700	116826764	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	7	-19.8824
chr7	13617405	13617461	protein_coding	Chmp2a	utr3	ENSMUSG00000033916	ProperStrand	17	chr10	23505205	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-8.5071
chr2	25416113	25416129	protein_coding	Edf1	exon	ENSMUSG00000015092	ProperStrand	22	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-13.7172
chr5	33369238	33369280	protein_coding	Ywhah	exon	ENSMUSG00000018965	ProperStrand	81	chr11	69483136	69483278	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-5.4114
chr1	75484537	75484553	protein_coding	Obsl1	exon	ENSMUSG00000026211	NonProperStrand	192	chr11	97643028	97643092	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-0.7809
chr16	23110964	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	chr13	22006780	22006822	tRNA	tRNA85-LeuCAA	.	458948	ProperStrand	54	2	-0.9593
chr8	84351355	84351445	protein_coding	Inpp4b	intron	ENSMUSG00000037940	NonProperStrand	33	chr8	84351550	84351640	pseudogene	Gm17072	.	ENSMUSG00000091998	NonProperStrand	1	1	-inf
chr2	158205282	158205372	snoRNA	ENSMUSG00000064585_SNORA71	.	ENSMUSG00000064585	ProperStrand	418	chr10	23505236	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	19	-9.3370
mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr11	69483136	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	32	-5.2383
chr2	31529355	31529393	protein_coding	Exosc2	intron	ENSMUSG00000039356	ProperStrand	39	chr1	162967516	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.2823
chr8	86770291	86770385	protein_coding	D8Ertd738e	utr3	ENSMUSG00000019362	ProperStrand	7	chr16	23111447	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-5.0992
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr5	115607937	115608037	protein_coding	Mlec	exon	ENSMUSG00000048578	ProperStrand	47	1	-8.8058
chr13	73931541	73932593	protein_coding	Slc12a7	exon	ENSMUSG00000017756	ProperStrand	80	chr8	73419702	73419782	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.6221
chr2	90235317	90235340	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	112204333	112204376	protein_coding	Tmem85	exon	ENSMUSG00000027131	ProperStrand	19	1	-6.7268
chr5	121655015	121655097	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	NonProperStrand	38	chr4	131866172	131866272	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	NonProperStrand	19	1	-16.6149
chr19	53406810	53406826	protein_coding	Mxi1	intron	ENSMUSG00000025025	ProperStrand	51	chr11	97643142	97643177	protein_coding	Rpl23	exon	ENSMUSG00000071415	ProperStrand	920	1	-8.1819
chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	chr1	162966813	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-1.5474
chr6	83105563	83105580	protein_coding-noncoding	Wdr54	utr3	ENSMUSG00000030032	NonProperStrand	10	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.0395
chr13	59923219	59923304	protein_coding	Zcchc6	exon	ENSMUSG00000035248	ProperStrand	23	chr7	29136600	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.1043
chr2	89368462	89368479	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	chrX	34622961	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	3	-2.9032
chr10	97763560	97763581	SINE	ID_B1	B4	chr10ID_B197763414	ProperStrand	1	chr16	23110894	23110961	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr10	95499367	95499383	protein_coding	Eea1	utr3	ENSMUSG00000036499	ProperStrand	82	chr7	116664872	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.0275
chr10	127520386	127520417	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr5	147646805	147646848	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	1	-3.4612
chr12	86685245	86685262	protein_coding	Tmed10	exon	ENSMUSG00000021248	ProperStrand	34	chr1	162966812	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-7.3896
chr5	34234245	34234262	protein_coding	Whsc1	utr5	ENSMUSG00000057406	ProperStrand	409	chr14	76247753	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-1.9766
chr1	120579416	120579492	protein_coding	Tfcp2l1	utr3	ENSMUSG00000026380	ProperStrand	158	chr4	116826700	116826766	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-4.8872
chr11	6315895	6315925	protein_coding	Ppia	utr5	ENSMUSG00000071866	ProperStrand	127	chr4	131865855	131865931	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.7590
chr18	38924214	38924233	protein_coding	Arhgap26	intron	ENSMUSG00000036452	NonProperStrand	29	chr8	129468746	129468870	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-5.8296
chr7	29073210	29073330	protein_coding	BC089491	exon	ENSMUSG00000046750	ProperStrand	62	chr16	23111725	23111754	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.8514
chr16	57391625	57391730	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr7	116663633	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	NonProperStrand	51	3	-inf
chr1	166193684	166193775	protein_coding	Slc19a2	utr3	ENSMUSG00000040918	ProperStrand	22	chr9	15130960	15131005	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	3	-20.1418
chr2	27315569	27315649	protein_coding	Brd3	intron	ENSMUSG00000026918	ProperStrand	85	chr4	131865403	131865493	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-3.3567
chr1	138122170	138122187	protein_coding	5730559C18Rik	intron	ENSMUSG00000041605	NonProperStrand	22	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-8.4371
chr1	145971868	145971889	LINE	L2	L2	chr1L2145971861	NonProperStrand	49	mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	1	-6.3032
chr10	23505565	23505627	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	chr13	23592816	23592880	tRNA	tRNA950-SerAGA	.	22706	ProperStrand	8	3	-19.1120
chr19	4195063	4195124	protein_coding	Ppp1ca	utr3	ENSMUSG00000040385	ProperStrand	40	chr18	35716683	35716760	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.8651
chr4	135521534	135521550	protein_coding	Gale	exon	ENSMUSG00000028671	ProperStrand	61	chr3	95465209	95465263	protein_coding	Mcl1	utr3	ENSMUSG00000038612	ProperStrand	75	1	-12.8324
chr3	41296234	41296295	lincRNA	C430002E04Rik	intron	ENSMUSG00000091878	ProperStrand	5	chr1	162965555	162965602	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-8.2678
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr8	10559591	10559608	protein_coding	Myo16	intron	ENSMUSG00000039057	ProperStrand	30	1	-10.3023
chr2	3969004	3969020	protein_coding	Frmd4a	intron	ENSMUSG00000026657	NonProperStrand	16	chr11	106934237	106934263	protein_coding	Bptf	exon	ENSMUSG00000040481	ProperStrand	70	1	-15.6894
chr15	78368127	78368144	protein_coding	Sstr3	utr3	ENSMUSG00000044933	NonProperStrand	17	chr4	116826698	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-9.3243
chr15	61818765	61818782	protein_coding	Myc	utr5	ENSMUSG00000022346	ProperStrand	2	chr2	130390993	130391062	protein_coding	Mrps26	utr3	ENSMUSG00000037740	ProperStrand	4	1	-inf
chr12	101153756	101173251	protein_coding	Tdp1	exon	ENSMUSG00000021177	ProperStrand	23	chr10	23505152	23505215	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.7622
chr10	80737414	80737483	protein_coding	Tjp3	exon	ENSMUSG00000034917	ProperStrand	10	chrX	34622906	34622981	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-10.9061
chr7	26078054	26078102	protein_coding	Cic	exon	ENSMUSG00000005442	ProperStrand	80	chr2	26494761	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-4.5618
chr4	146838221	146838314	lincRNA	Gm16889	intron	ENSMUSG00000084976	NonProperStrand	2	chr7	29136613	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-9.5181
chr5	44584535	44584556	protein_coding	Tapt1	exon	ENSMUSG00000046985	ProperStrand	5	chr9	15118284	15118374	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-13.8577
chr3	104457427	104457508	protein_coding	Slc16a1	exon	ENSMUSG00000032902	ProperStrand	48	chr4	131908242	131908359	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-3.2324
chr17	56855191	56856062	protein_coding	Vmac	utr5	ENSMUSG00000054723	ProperStrand	5	chr6	145564547	145564563	protein_coding	Tuba3b	utr5	ENSMUSG00000067338	ProperStrand	152	2	-19.0678
chr17	26644595	26644612	protein_coding	Dusp1	exon	ENSMUSG00000024190	ProperStrand	16	chr1	89673592	89673653	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-5.8062
chr14	60167167	60167267	protein_coding	Cab39l	utr3	ENSMUSG00000021981	ProperStrand	11	chr19	8799617	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-10.2114
chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	chr1	88253681	88254770	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	2	-6.3178
chr2	174997697	174997716	protein_coding-noncoding	Gm14443	utr3	ENSMUSG00000078902	ProperStrand	1	chr5	130300504	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-inf
chr1	121317856	121317873	protein_coding	Inhbb	utr5	ENSMUSG00000037035	NonProperStrand	12	chr9	15119968	15120012	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-10.5219
chr10	23505549	23505601	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	chr16	43886855	43886929	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	2	-4.5003
chr10	5989974	5990053	protein_coding	Akap12	utr3	ENSMUSG00000038587	ProperStrand	1008	chr1	59761157	59761180	snoRNA	ENSMUSG00000089512_SNORD11	.	ENSMUSG00000089512	ProperStrand	43	3	-18.4888
chr16	59054411	59054491	LINE	Lx	L1	chr16Lx59054273	NonProperStrand	1	chr7	93345706	93345796	LINE	L1_Mus4	L1	chr7L1_Mus493345429	NonProperStrand	1	1	-inf
chr14	8766543	8766600	protein_coding	Flnb	intron	ENSMUSG00000025278	ProperStrand	124	chr4	116827121	116827154	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-5.6099
chr7	129312972	129313052	protein_coding	Plk1	exon	ENSMUSG00000030867	ProperStrand	146	chr4	116828476	116828566	protein_coding	Rps8	intron	ENSMUSG00000047675	ProperStrand	262	1	-8.5777
chr9	58475653	58475673	protein_coding	Nptn	exon	ENSMUSG00000032336	ProperStrand	25	chr14	33005094	33005139	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-5.6889
chr10	127511325	127513161	protein_coding	Ptges3	utr3	ENSMUSG00000071072	ProperStrand	89	chr11	83085101	83085192	snRNA	ENSMUSG00000064856_U2	.	ENSMUSG00000064856	ProperStrand	34	8	-19.3361
chr10	85076626	85076646	protein_coding	Btbd11	intron	ENSMUSG00000020042	NonProperStrand	8	chr2	105182311	105182329	protein_coding	0610012H03Rik	intron	ENSMUSG00000055312	ProperStrand	6	1	-18.5855
chr17	33961611	33966613	protein_coding	Ndufa7	exon	ENSMUSG00000041881	ProperStrand	64	chr11	62416951	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-5.9161
chr17	35147496	35147597	protein_coding	Vars	exon	ENSMUSG00000007029	ProperStrand	121	chr11	99885311	99885327	protein_coding	Krt33b	exon	ENSMUSG00000057723	NonProperStrand	352	9	-19.2042
chr10	75322194	75322228	protein_coding	Mif	utr3	ENSMUSG00000033307	ProperStrand	146	chr5	23825941	23825957	protein_coding	Kcnh2	exon	ENSMUSG00000038319	ProperStrand	242	1	-8.7358
chr16	35932620	35932636	protein_coding	Dtx3l	exon	ENSMUSG00000049502	ProperStrand	152	chr12	17552948	17552994	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-3.3367
chr2	120359500	120359580	protein_coding	Zfp106	exon	ENSMUSG00000027288	ProperStrand	199	chr3	108357255	108357345	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-2.3629
chr7	142290769	142290874	protein_coding	Dock1	intron	ENSMUSG00000058325	ProperStrand	22	chr9	15118334	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	4	-16.8436
chr15	100084595	100084695	protein_coding	Atf1	exon	ENSMUSG00000023027	ProperStrand	19	chr14	103598731	103599352	protein_coding	Mycbp2	exon	ENSMUSG00000033004	ProperStrand	129	11	-inf
chr2	76529572	76529610	protein_coding	Plekha3	intron	ENSMUSG00000002733	ProperStrand	4	chr9	45669685	45669725	protein_coding	Bace1	utr3	ENSMUSG00000032086	ProperStrand	12	3	-21.4075
chr1	136521344	136528525	protein_coding	Kdm5b	utr5	ENSMUSG00000042207	ProperStrand	223	chr8	73419657	73419772	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-2.0641
chr5	137735634	137735652	protein_coding	Ache	utr3	ENSMUSG00000023328	ProperStrand	1	chr16	23110461	23110551	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-inf
chr4	55431651	55431668	lincRNA	Gm12505	exon	ENSMUSG00000087070	ProperStrand	447	chr19	9042784	9043698	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	2	-8.9664
chr5	24345521	24345601	protein_coding	Rheb	intron	ENSMUSG00000028945	ProperStrand	8	chr5	24200621	24200711	protein_coding	Nub1	intron	ENSMUSG00000028954	ProperStrand	32	1	-18.1730
chr18	36885433	36885449	protein_coding	Cd14	exon	ENSMUSG00000051439	ProperStrand	65	chr2	37255620	37255661	snoRNA	ENSMUSG00000077756_Snord90	.	ENSMUSG00000077756	ProperStrand	167	1	-11.0983
chr5	66218431	66218480	protein_coding	N4bp2	utr3	ENSMUSG00000037795	ProperStrand	30	chr14	55476645	55476661	protein_coding	Homez	exon	ENSMUSG00000057156	NonProperStrand	127	1	-13.2100
chr5	71469916	71469996	protein_coding	Gabra2	intron	ENSMUSG00000000560	NonProperStrand	15	chr18	37255861	37255951	protein_coding	Pcdha4	intron	ENSMUSG00000007440	ProperStrand	8	1	-19.9036
chr11	87863147	87864146	protein_coding	Srsf1	utr3	ENSMUSG00000018379	ProperStrand	49	chr16	23110828	23110940	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-1.9572
chr11	120439983	120440083	protein_coding	Arhgdia	utr3	ENSMUSG00000025132	ProperStrand	39	chr17	35089181	35089233	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-6.3339
chr15	89248061	89248080	protein_coding	Cpt1b	intron	ENSMUSG00000078937	ProperStrand	5	chr17	13112508	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-9.6638
chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	chr11	62418038	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-0.8206
chr19	46560772	46560806	protein_coding	Sufu	utr3	ENSMUSG00000025231	ProperStrand	6	chr19	8800380	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-13.2723
chrX	96245892	96245908	protein_coding	Stard8	intron	ENSMUSG00000031216	ProperStrand	142	chr4	131865855	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.3527
chr7	53089954	53089976	protein_coding	Grin2d	intron	ENSMUSG00000002771	NonProperStrand	31	chr8	108210267	108210284	protein_coding	Rltpr	intron	ENSMUSG00000050357	NonProperStrand	22	1	-16.6538
chr15	27849907	27849965	protein_coding	Trio	intron	ENSMUSG00000022263	ProperStrand	108	chr16	23111772	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.0553
chr10	89207766	89207783	protein_coding	Uhrf1bp1l	utr5	ENSMUSG00000019951	ProperStrand	28	chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	1	-14.1074
chr14	55525795	55525811	protein_coding	Slc22a17	utr3	ENSMUSG00000022199	ProperStrand	8	chr4	131865855	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-9.1913
chr4	116358223	116358265	protein_coding	Prdx1	utr5	ENSMUSG00000028691	ProperStrand	41	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.0019
chr11	62418014	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	chr10	23505559	23505602	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-0.7216
chr9	108465607	108465761	protein_coding	Impdh2	exon	ENSMUSG00000062867	ProperStrand	74	chr16	23110840	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-1.0172
chr9	103267792	103267863	protein_coding	Cdv3	utr5	ENSMUSG00000032803	ProperStrand	68	chr11	4820972	4820990	protein_coding	Thoc5	intron	ENSMUSG00000034274	ProperStrand	325	1	-9.6765
chr10	56108990	56109054	protein_coding	Gja1	utr3	ENSMUSG00000050953	ProperStrand	70	chr4	131866608	131866640	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	1	-8.7960
chr11	94420242	94420784	protein_coding	Acsf2	exon	ENSMUSG00000076435	ProperStrand	34	chr5	130300500	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.5258
chr3	116337885	116339221	protein_coding	Hiat1	exon	ENSMUSG00000089911	ProperStrand	20	chr7	116664793	116664870	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-4.5800
chr6	54090068	54090088	protein_coding	Chn2	intron	ENSMUSG00000004633	NonProperStrand	4	chr7	29136585	29136655	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-7.7378
chr19	7502333	7502350	protein_coding	Rtn3	exon	ENSMUSG00000024758	NonProperStrand	30	chr18	35714186	35714205	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.7548
chr12	111891500	111891580	protein_coding	Dync1h1	intron	ENSMUSG00000018707	ProperStrand	648	chr9	64025243	64025576	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	1	-4.0260
chr2	130617594	130617694	protein_coding	4930402H24Rik	exon	ENSMUSG00000027309	ProperStrand	16	chr7	148634776	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-6.5767
chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr14	96988162	96988179	snoRNA	ENSMUSG00000064581_SNORA30	.	ENSMUSG00000064581	ProperStrand	146	2	-3.2387
chr17	75016712	75016805	protein_coding	Birc6	intron	ENSMUSG00000024073	ProperStrand	110	chr11	68887002	68887065	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-3.0278
chr9	15120984	15121074	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	chr17	56761514	56761869	protein_coding	Lonp1	exon	ENSMUSG00000041168	ProperStrand	83	1	-9.0564
chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	chr8	108724719	108724784	protein_coding	Slc7a6os	utr3	ENSMUSG00000033106	ProperStrand	9	1	-13.2851
chr11	102294589	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr1	90123798	90124639	protein_coding	Heatr7b1	utr5	ENSMUSG00000079429	ProperStrand	147	1	-7.1076
chr7	26444285	26444360	protein_coding	Exosc5	exon	ENSMUSG00000061286	ProperStrand	16	chr8	129468746	129468781	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-7.0247
chr2	147011593	147011616	protein_coding	Nkx2-2	exon	ENSMUSG00000027434	ProperStrand	47	chr11	59778161	59778177	protein_coding	Rasd1	exon	ENSMUSG00000049892	NonProperStrand	49	1	-14.2250
chr13	58495723	58495926	protein_coding	Hnrnpk	exon	ENSMUSG00000021546	ProperStrand	117	chr7	117189932	117190012	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.1695
chrX	11634735	11634814	protein_coding	Bcor	exon	ENSMUSG00000040363	ProperStrand	20	chr3	123210854	123210897	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-4.0323
chr5	117836619	117836709	protein_coding	Rfc5	utr3	ENSMUSG00000029363	ProperStrand	15	chr16	23111738	23111818	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.3973
chr12	111863768	111863960	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr17	35089181	35089253	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	4	-5.5279
chr17	32136659	32136707	protein_coding	Hsf2bp	intron	ENSMUSG00000002076	ProperStrand	17	chr4	131908809	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.3002
chr5	137411798	137411849	lincRNA	4933404O12Rik	exon	ENSMUSG00000085062	ProperStrand	5	chr1	162965535	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-8.2678
chr1	133724844	133724861	protein_coding	Slc41a1	utr5	ENSMUSG00000013275	ProperStrand	19	chr12	16572484	16575234	protein_coding	Lpin1	exon	ENSMUSG00000020593	ProperStrand	15	1	-19.0680
chr7	28146782	28146798	protein_coding	Spnb4	exon	ENSMUSG00000011751	NonProperStrand	84	chr6	106724452	106724509	protein_coding	Trnt1	exon	ENSMUSG00000013736	ProperStrand	4	3	-inf
chr16	8738507	8738584	protein_coding	Usp7	intron	ENSMUSG00000022710	ProperStrand	118	chr15	98350146	98350208	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-3.4870
chr7	17416827	17416843	protein_coding	Strn4	exon	ENSMUSG00000030374	NonProperStrand	11	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-11.1946
chr8	59992804	59992874	protein_coding	Hmgb2	exon	ENSMUSG00000054717	ProperStrand	184	chr14	33005158	33005248	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-2.0162
chr3	85941944	85941987	protein_coding	Rps3a	exon	ENSMUSG00000028081	ProperStrand	177	chr16	21903994	21905191	protein_coding	Map3k13	exon	ENSMUSG00000033618	NonProperStrand	16	1	-13.8287
chr4	48675426	48675443	protein_coding	Tmeff1	utr3	ENSMUSG00000028347	ProperStrand	47	chr16	57391627	57391670	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	1	-10.7977
chr1	90985566	90985618	protein_coding	Sh3bp4	intron	ENSMUSG00000036206	ProperStrand	20	chr2	179909647	179909960	protein_coding	Adrm1	exon	ENSMUSG00000039041	ProperStrand	27	1	-17.0283
chr14	76904261	76904277	protein_coding	Tsc22d1	intron	ENSMUSG00000022010	NonProperStrand	7	chr3	123210913	123210985	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-6.1463
chr9	40611256	40611324	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr2	32818807	32818897	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-1.0155
chr17	45707316	45707337	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr2	150735319	150735339	protein_coding	Gins1	utr5	ENSMUSG00000027454	ProperStrand	51	1	-7.0530
chr4	141175330	141175875	protein_coding	Slc25a34	utr3	ENSMUSG00000040740	ProperStrand	15	chr16	23111383	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-9.1065
chr7	116663659	116663749	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	NonProperStrand	51	chr14	63287571	63287607	snoRNA	ENSMUSG00000089531_SNORA73	.	ENSMUSG00000089531	NonProperStrand	2	1	-inf
chr6	85418077	85418135	protein_coding	Cct7	exon	ENSMUSG00000030007	ProperStrand	173	chr12	55797771	55797861	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	6	-inf
chr13	9833552	9833619	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr1	127491938	127491955	protein_coding	Slc35f5	utr3	ENSMUSG00000026342	ProperStrand	70	1	-4.6574
chr7	25795368	25795386	protein_coding	Grik5	utr3	ENSMUSG00000003378	NonProperStrand	3	chr1	165993210	165993226	protein_coding	Sell	exon	ENSMUSG00000026581	ProperStrand	12	2	-inf
chr19	10269912	10269968	protein_coding	Fads1	utr3	ENSMUSG00000010663	ProperStrand	21	chr5	130300470	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.4412
chr2	132132488	132135304	protein_coding	Cds2	utr3	ENSMUSG00000058793	ProperStrand	47	chr10	23505152	23505258	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-2.9598
chr11	3868284	3869474	protein_coding	Pes1	exon	ENSMUSG00000020430	ProperStrand	49	chr11	97642952	97643003	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.8235
chr16	89792422	89792538	protein_coding-noncoding	Tiam1	utr3	ENSMUSG00000002489	ProperStrand	1	chr19	8798739	8798760	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-inf
chr10	76521466	76521555	protein_coding	Col18a1	exon	ENSMUSG00000001435	ProperStrand	287	chr6	136878197	136880785	protein_coding	Arhgdib	exon	ENSMUSG00000030220	ProperStrand	1	1	-inf
chr6	112689098	112689322	protein_coding	Srgap3	exon	ENSMUSG00000030257	NonProperStrand	208	chr13	38023433	38023467	protein_coding	Rreb1	exon	ENSMUSG00000039087	ProperStrand	33	1	-12.0266
chr11	11661227	11661243	protein_coding	Ikzf1	exon	ENSMUSG00000018654	ProperStrand	3	chr4	131908236	131908284	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-7.2242
chr2	118572092	118572108	antisense	5430417L22Rik	.	ENSMUSG00000074918	ProperStrand	5	chr17	34472788	34472804	protein_coding	H2-Eb2	exon	ENSMUSG00000067341	NonProperStrand	17	1	-19.6626
chr1	93272496	93272580	protein_coding	Ilkap	utr3	ENSMUSG00000026309	ProperStrand	53	chr11	77995189	77995239	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-6.4279
chr5	30442894	30442911	protein_coding	Fam59b	exon	ENSMUSG00000044576	NonProperStrand	20	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-5.7112
chr1	173171166	173171183	protein_coding	Ndufs2	exon	ENSMUSG00000013593	ProperStrand	32	chr19	39917317	39917333	protein_coding	Cyp2c69	utr3	ENSMUSG00000092008	NonProperStrand	83	1	-13.9319
chr4	117748760	117748777	protein_coding	St3gal3	intron	ENSMUSG00000028538	NonProperStrand	6	chr19	8963118	8963182	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-6.7266
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr5	115717665	115717681	protein_coding	Rnf10	intron	ENSMUSG00000041740	NonProperStrand	21	1	-8.0023
chr19	46022236	46022252	protein_coding	9130011E15Rik	intron	ENSMUSG00000039901	ProperStrand	129	chr1	162967516	162967563	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-2.1372
chr9	44612345	44612421	protein_coding	Mll1	utr3	ENSMUSG00000002028	ProperStrand	151	chr11	6519852	6519942	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-6.1139
chrX	90827379	90827395	protein_coding	Pola1	exon	ENSMUSG00000006678	ProperStrand	83	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.2907
chr1	182503921	182507768	protein_coding	Parp1	exon	ENSMUSG00000026496	ProperStrand	227	chr12	106269462	106269552	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-1.8082
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	29432714	29432730	protein_coding	Kcp	utr3	ENSMUSG00000059022	NonProperStrand	4	1	-10.0500
chr9	78023109	78023183	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr1	91784114	91784214	protein_coding	Agap1	exon	ENSMUSG00000055013	ProperStrand	229	1	-3.3296
chr19	3486995	3487015	protein_coding	Ppp6r3	exon	ENSMUSG00000024908	ProperStrand	63	chr19	8799829	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	2	-8.0225
chr10	126517531	126517548	protein_coding	Agap2	exon	ENSMUSG00000025422	NonProperStrand	22	chr9	15118245	15118322	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-5.3884
chr11	98906761	98906830	protein_coding	Igfbp4	intron	ENSMUSG00000017493	ProperStrand	27	chr17	13112532	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-6.1426
chr11	119070480	119070570	protein_coding	Tbc1d16	exon	ENSMUSG00000039976	ProperStrand	19	chr7	117166761	117166841	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-7.0924
chr15	41651569	41651586	protein_coding	Oxr1	exon	ENSMUSG00000022307	NonProperStrand	12	chr19	48281027	48281048	protein_coding	Sorcs3	exon	ENSMUSG00000063434	ProperStrand	16	1	-19.5274
chr5	92875347	92875364	protein_coding	Scarb2	exon	ENSMUSG00000029426	ProperStrand	30	chr17	23955820	23955838	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	1	-12.8770
chr2	9800038	9800054	antisense	Gm13256	.	ENSMUSG00000086618	ProperStrand	4	chr19	8963129	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-7.6308
chr3	94838576	94838660	protein_coding	Psmd4	exon	ENSMUSG00000005625	ProperStrand	20	chr17	32193604	32193663	protein_coding	Rrp1b	exon	ENSMUSG00000058392	ProperStrand	38	1	-16.4324
chr17	39979942	39979983	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	mmu-miR-1949	2	23	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	1	-2.3526
chr2	90235298	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	98544179	98544223	protein_coding	Psmd3	exon	ENSMUSG00000017221	ProperStrand	51	1	-4.7748
chr2	84525440	84525475	protein_coding	Med19	exon	ENSMUSG00000027080	ProperStrand	22	chr11	69483136	69483248	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-10.4574
chr9	21547191	21547231	protein_coding	Ldlr	exon	ENSMUSG00000032193	ProperStrand	60	chr16	23111718	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.9032
chr1	89616186	89616202	protein_coding	Inpp5d	utr3	ENSMUSG00000026288	NonProperStrand	3	chr16	90386834	90386852	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	1	-19.4396
chr4	123033469	123033485	protein_coding	Macf1	intron	ENSMUSG00000028649	NonProperStrand	17	chr6	70794803	70794820	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	1	-13.9888
chr8	113423133	113423346	protein_coding	Fuk	exon	ENSMUSG00000033703	ProperStrand	18	chr2	26494717	26494807	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	3	-12.7797
chr17	38290745	38290764	LTR	MurERV4-int	ERVK	chr17MurERV4-int38290059	ProperStrand	21	chr12	84040062	84040078	protein_coding	Rgs6	intron	ENSMUSG00000021219	NonProperStrand	65	1	-15.2752
chr9	78327843	78327891	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr7	95266597	95266613	protein_coding	Grm5	intron	ENSMUSG00000049583	NonProperStrand	145	1	-4.6169
chr2	90235286	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	118587121	118587385	protein_coding	A430105I19Rik	exon	ENSMUSG00000045838	ProperStrand	37	1	-5.3993
chr11	6294274	6294370	protein_coding	Zmiz2	intron	ENSMUSG00000041164	ProperStrand	69	chr3	68889086	68889140	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-3.0052
chr17	32454194	32454247	protein_coding	Akap8	exon	ENSMUSG00000024045	ProperStrand	339	chr2	32818849	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-2.2814
chr11	109086896	109086914	protein_coding	Rgs9	utr3	ENSMUSG00000020599	NonProperStrand	18	chr5	111217776	111217810	protein_coding	Ulk1	exon	ENSMUSG00000029512	ProperStrand	92	1	-14.8946
chr16	33726534	33726550	protein_coding	Heg1	exon	ENSMUSG00000075254	NonProperStrand	37	chr11	83107805	83107845	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	2	-15.5054
chr15	80082271	80082371	protein_coding	Smcr7l	utr3	ENSMUSG00000022412	ProperStrand	19	chr12	60774058	60774112	snoRNA	ENSMUSG00000077603_SNORA3	.	ENSMUSG00000077603	ProperStrand	185	1	-13.3866
chr15	89135790	89135855	protein_coding	Sbf1	exon	ENSMUSG00000036529	ProperStrand	85	chr16	23111437	23111462	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.8188
chr1	38108714	38108786	protein_coding	Eif5b	utr3	ENSMUSG00000026083	ProperStrand	118	chr1	145497018	145497035	protein_coding	Cdc73	intron	ENSMUSG00000026361	ProperStrand	22	2	-inf
chr9	21201999	21202031	protein_coding	Ilf3	exon	ENSMUSG00000032178	ProperStrand	164	chr10	126985376	126985393	protein_coding	Lrp1	exon	ENSMUSG00000040249	ProperStrand	151	1	-9.4448
chr5	141000555	141000571	protein_coding	Chst12	exon	ENSMUSG00000036599	NonProperStrand	42	chr4	131908363	131908418	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.9630
chr5	31378333	31378387	protein_coding	Cad	exon	ENSMUSG00000013629	ProperStrand	260	chr11	69481335	69481386	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-1.8236
chr10	122002174	122002254	LINE	L1Md_F2	L1	chr10L1Md_F2122002095	NonProperStrand	23	chr8	13417163	13417253	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-8.3759
chr13	9833551	9833654	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr4	131908359	131908914	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	11	-11.0017
chr10	82456766	82456784	protein_coding	Chst11	intron	ENSMUSG00000034612	ProperStrand	170	chr4	131908301	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-0.6957
chr16	32247412	32247429	protein_coding	Wdr53	utr5	ENSMUSG00000022787	NonProperStrand	10	chr4	48481250	48481282	protein_coding	Tex10	exon	ENSMUSG00000028345	ProperStrand	9	1	-19.9862
chr1	135028553	135028599	protein_coding	Ppp1r15b	exon	ENSMUSG00000046062	ProperStrand	46	chr11	69481341	69481441	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.6886
chr11	29273928	29273945	protein_coding	Ccdc88a	utr5	ENSMUSG00000032740	NonProperStrand	1	chr10	8233569	8233588	protein_coding	Ust	intron	ENSMUSG00000047712	NonProperStrand	15	1	-inf
chr9	70960077	70960093	protein_coding	Aqp9	exon	ENSMUSG00000032204	NonProperStrand	118	chrX	83547356	83547372	protein_coding	Mageb4	intron	ENSMUSG00000035427	NonProperStrand	191	1	-9.6333
chr11	84653823	84653862	protein_coding	Ggnbp2	exon	ENSMUSG00000020530	ProperStrand	30	chr6	115758030	115758120	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-6.8437
chr11	60370927	60370943	protein_coding	Alkbh5	utr3	ENSMUSG00000042650	ProperStrand	203	chr15	25294507	25294569	protein_coding	Basp1	exon	ENSMUSG00000045763	ProperStrand	10	1	-14.5368
chr16	57391760	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr13	49779667	49779745	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-1.8888
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr16	29815437	29815455	lincRNA	Gm17734	intron	ENSMUSG00000090506	NonProperStrand	3	1	-14.1554
chr1	63224374	63225026	protein_coding	Eef1b2	exon	ENSMUSG00000025967	ProperStrand	106	chr10	110918547	110918627	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-2.4409
chr19	45033384	45033473	protein_coding	Fam178a	intron	ENSMUSG00000036097	ProperStrand	29	chr7	16534823	16534839	protein_coding	Ehd2	utr3	ENSMUSG00000074364	NonProperStrand	197	1	-12.3991
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr5	124795561	124795601	protein_coding	Cdk2ap1	utr3	ENSMUSG00000029394	ProperStrand	22	1	-9.0457
chr6	146769068	146769125	protein_coding	Arntl2	exon	ENSMUSG00000040187	ProperStrand	2	chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	2	-inf
chr11	45723144	45723160	protein_coding	Clint1	utr3	ENSMUSG00000006169	NonProperStrand	273	chr1	23929050	23929110	protein_coding	Smap1	utr5	ENSMUSG00000026155	ProperStrand	10	1	-13.9446
chr12	3968611	3968627	protein_coding	Efr3b	exon	ENSMUSG00000020658	ProperStrand	142	chr14	35148490	35148514	protein_coding	Glud1	exon	ENSMUSG00000021794	ProperStrand	72	1	-11.2175
chr1	194571794	194571884	snRNA	ENSMUSG00000064881_U5	.	ENSMUSG00000064881	ProperStrand	187	chr10	110918552	110918632	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-1.5373
chr11	75179669	75179732	protein_coding	Smyd4	intron	ENSMUSG00000018809	ProperStrand	11	chr4	131908809	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.1344
chr5	143874599	143874615	protein_coding	Rnf216	utr5	ENSMUSG00000045078	NonProperStrand	29	chr4	131866209	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-5.0536
chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	chr2	26494763	26494825	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.0889
chr14	27393142	27393222	LTR	RMER19B	ERVK	chr14RMER19B27393150	NonProperStrand	1	chr6	124698388	124698478	protein_coding	Atn1	intron	ENSMUSG00000004263	NonProperStrand	3	1	-inf
chrX	71589889	71589908	protein_coding	Plxna3	utr3	ENSMUSG00000031398	NonProperStrand	1	chr16	23110906	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	NonProperStrand	93	1	-inf
chr8	41393465	41393555	protein_coding	Efha2	exon	ENSMUSG00000039478	ProperStrand	5	chr17	35299555	35299635	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-9.8702
chr5	147646414	147646457	snoRNA	ENSMUSG00000077185_SNORD102	.	ENSMUSG00000077185	ProperStrand	142	chr3	123210910	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-0.8461
chr10	90076970	90076990	protein_coding	Anks1b	intron	ENSMUSG00000058589	NonProperStrand	230	chr1	102076757	102076796	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	1	-6.7595
chr1	153538531	153538557	protein_coding	Fam129a	intron	ENSMUSG00000026483	NonProperStrand	10	chr8	129468746	129468836	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	5	-19.8336
chr1	194423806	194423823	protein_coding	Hhat	intron	ENSMUSG00000037375	ProperStrand	12	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-6.4045
chr9	48241068	48241084	DNA	Cheshire	MER1_type	chr9Cheshire48240856	ProperStrand	17	chr2	119598982	119599002	protein_coding	Rpap1	exon	ENSMUSG00000034032	ProperStrand	96	1	-14.9246
chr7	24779190	24779213	SINE	ID_B1	B4	chr7ID_B124779183	NonProperStrand	54	chr9	122075466	122075482	protein_coding	Snrk	exon	ENSMUSG00000038145	NonProperStrand	97	1	-12.5616
chr2	26767738	26767781	protein_coding-noncoding	Rpl7a	utr5	ENSMUSG00000062647	ProperStrand	53	chr17	24665439	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-5.1814
chr4	118294782	118295903	protein_coding	Ebna1bp2	exon	ENSMUSG00000028729	ProperStrand	18	chr4	137207239	137207329	protein_coding	Usp48	intron	ENSMUSG00000043411	ProperStrand	135	4	-20.2852
chr17	30772308	30772324	protein_coding	Dnahc8	utr5	ENSMUSG00000033826	ProperStrand	246	chr11	69481332	69481384	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-0.9789
chr16	38447385	38447475	protein_coding	Adprh	exon	ENSMUSG00000002844	ProperStrand	30	chr4	131865860	131865940	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.9337
chr8	97343978	97344043	protein_coding	Ciapin1	utr3	ENSMUSG00000031781	ProperStrand	24	chr11	69481334	69481390	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	4	-15.6265
chr17	34092067	34092090	protein_coding	Rps18	exon	ENSMUSG00000008668	ProperStrand	111	chr8	80041484	80041501	protein_coding	Arhgap10	intron	ENSMUSG00000037148	ProperStrand	58	1	-12.1461
chr5	90375308	90375326	DNA	Tigger13a	MER2_type	chr5Tigger13a90375039	ProperStrand	1	chr11	6428108	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-inf
chr5	130295521	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	NonProperStrand	4	chr19	8963086	8963178	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-15.8299
chr8	98095375	98095391	protein_coding	Prss54	intron	ENSMUSG00000048400	NonProperStrand	1	chr4	122968584	122968650	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-inf
chr15	57496012	57496032	LTR	RMER15	ERVL	chr15RMER1557495890	NonProperStrand	10	chr10	128355578	128355626	protein_coding	Rdh5	utr5	ENSMUSG00000025350	ProperStrand	1	1	-inf
chr7	148677772	148677946	protein_coding	Tspan4	exon	ENSMUSG00000025511	ProperStrand	13	chr3	123210854	123210889	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	7	-20.8772
chr13	107584840	107584874	protein_coding	Ipo11	utr3	ENSMUSG00000042590	ProperStrand	120	chr1	162968213	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-5.4536
chr17	24858132	24858193	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr4	116826699	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-3.2800
chr2	129998657	129998715	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr7	31895791	31899711	protein_coding	Hpn	utr5	ENSMUSG00000001249	ProperStrand	126	1	-6.6348
chrX	41969978	41969996	LINE	Lx5	L1	chrXLx541969931	ProperStrand	1	chr18	12370329	12370707	protein_coding	Npc1	exon	ENSMUSG00000024413	ProperStrand	14	1	-inf
chr2	32077884	32079005	protein_coding	Prrc2b	exon	ENSMUSG00000039262	ProperStrand	344	chr10	62296306	62296354	protein_coding	Tet1	exon	ENSMUSG00000047146	ProperStrand	286	3	-15.1979
chr2	102522313	102522331	protein_coding	Slc1a2	intron	ENSMUSG00000005089	NonProperStrand	7	chr1	129271705	129271757	snoRNA	ENSMUSG00000065687_snoU6-53	.	ENSMUSG00000065687	ProperStrand	78	1	-17.2695
chr1	134886033	134886123	LTR	ORR1D1	MaLR	chr1ORR1D1134886048	NonProperStrand	3	chr16	23111418	23111498	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-6.9982
chr8	72334599	72334615	protein_coding	Gmip	exon	ENSMUSG00000036246	ProperStrand	102	chrX	132806010	132806034	protein_coding	Ngfrap1	exon	ENSMUSG00000046432	ProperStrand	28	1	-13.7893
chrX	71517882	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	chr2	26768049	26768122	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	2	-3.5907
chr7	50690726	50690742	protein_coding	Lim2	exon	ENSMUSG00000004613	NonProperStrand	50	chr5	121655052	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-6.8683
chr9	65127126	65127142	protein_coding	Cilp	exon	ENSMUSG00000042254	ProperStrand	212	chr6	125071741	125071820	snoRNA	ENSMUSG00000088208_SCARNA11	.	ENSMUSG00000088208	ProperStrand	113	1	-9.5117
chr5	104909187	104909229	protein_coding	Pkd2	exon	ENSMUSG00000034462	ProperStrand	13	chr17	24857793	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	3	-12.3659
chr1	55044258	55044286	protein_coding	Sf3b1	exon	ENSMUSG00000025982	ProperStrand	158	chr7	134935018	134939256	protein_coding	Setd1a	exon	ENSMUSG00000042308	ProperStrand	58	1	-11.4386
chr2	135360025	135360043	antisense	9630028H03Rik	.	ENSMUSG00000085631	NonProperStrand	22	chr11	60231118	60231245	protein_coding	4933439F18Rik	utr5	ENSMUSG00000018415	ProperStrand	26	1	-17.0169
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr12	21274407	21274423	protein_coding	Asap2	utr3	ENSMUSG00000052632	ProperStrand	45	1	-6.4720
chr7	126116699	126116777	protein_coding	Gprc5b	utr3	ENSMUSG00000008734	ProperStrand	7	chr17	24857717	24857807	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-6.4221
chrX	84483702	84483718	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr17	35384173	35384195	snoRNA	ENSMUSG00000065273_SNORD83	.	ENSMUSG00000065273	ProperStrand	244	1	-5.4778
chr11	100285782	100285799	protein_coding	Nt5c3l	intron	ENSMUSG00000017176	ProperStrand	1	chr1	77369788	77369846	protein_coding	Epha4	utr3	ENSMUSG00000026235	ProperStrand	57	1	-inf
chr1	137931341	137931431	protein_coding	Tmem9	utr3	ENSMUSG00000026411	ProperStrand	14	chr2	26493406	26493486	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-10.7407
chr17	86434105	86434195	protein_coding	Srbd1	intron	ENSMUSG00000024135	ProperStrand	16	chr4	131865383	131865463	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-6.5937
chr4	86502083	86502140	protein_coding	Rps6	exon	ENSMUSG00000028495	ProperStrand	263	chr16	23111777	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	5	-2.5024
chr9	44598075	44598095	protein_coding	Ift46	intron	ENSMUSG00000002031	ProperStrand	28	chr9	120037898	120037980	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	NonProperStrand	19	1	-17.0491
chr17	39979983	39980004	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr10	89512698	89512714	protein_coding	Anks1b	exon	ENSMUSG00000058589	ProperStrand	68	1	-6.9743
chr3	89842337	89842809	protein_coding	Ubap2l	exon	ENSMUSG00000042520	ProperStrand	88	chr5	130300469	130300549	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.8782
chr10	94668677	94668693	protein_coding	Cradd	intron	ENSMUSG00000045867	ProperStrand	25	chr11	106362303	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-7.5869
chr8	69904122	69904138	LTR	RMER13B	ERVK	chr8RMER13B69903872	ProperStrand	9	chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	1	-12.7889
chr13	81925874	81925933	protein_coding	Cetn3	exon	ENSMUSG00000021537	ProperStrand	9	chr8	25172181	25172204	protein_coding	Zmat4	utr3	ENSMUSG00000037492	ProperStrand	18	1	-18.6028
chr2	11701571	11701661	protein_coding-noncoding	Ankrd16	utr5	ENSMUSG00000047909	ProperStrand	1	chr2	11701388	11701468	protein_coding	Ankrd16	exon	ENSMUSG00000047909	ProperStrand	4	1	-inf
chr8	69388494	69388539	protein_coding	Naf1	exon	ENSMUSG00000014907	ProperStrand	104	chr13	46866727	46866743	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	1	-8.1089
chr2	126476310	126476345	protein_coding	Gabpb1	exon	ENSMUSG00000027361	ProperStrand	54	chr4	131908236	131908299	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-4.5824
chr8	96696722	96696738	protein_coding	Mt2	utr5	ENSMUSG00000031762	NonProperStrand	1	chr1	89681202	89681259	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-inf
chr7	52303513	52303613	protein_coding	Prr12	exon	ENSMUSG00000046574	ProperStrand	86	chr10	23505559	23505621	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-6.8344
chr2	154703435	154703480	protein_coding	Eif2s2	exon	ENSMUSG00000074656	ProperStrand	96	chrX	34622905	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	6	-13.7712
chr14	83221245	83221263	LINE	L1_Mur2	L1	chr14L1_Mur283221199	ProperStrand	7	chr9	15119967	15120036	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-11.6649
chr4	71787254	71787301	protein_coding	Tle1	utr3	ENSMUSG00000008305	ProperStrand	16	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-11.6621
chr2	26767046	26767583	protein_coding	Rpl7a	exon	ENSMUSG00000062647	ProperStrand	234	chr18	35714145	35714225	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-1.2163
mmu-miR-292a-3p	6	22	miRNA	mmu-miR-292a-3p	.	mmu-miR-292a-3p	ProperStrand	38	chr4	123059020	123059120	protein_coding	Macf1	exon	ENSMUSG00000028649	ProperStrand	320	4	-inf
chr8	77639826	77639879	protein_coding	Mcm5	exon	ENSMUSG00000005410	ProperStrand	199	chr1	137271110	137271126	protein_coding	Shisa4	exon	ENSMUSG00000041889	ProperStrand	64	1	-10.7784
chr5	115939535	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr19	8799022	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	7	-10.1815
chr2	4544718	4544734	protein_coding	Prpf18	utr3	ENSMUSG00000039449	NonProperStrand	66	chr5	92485164	92485218	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	1	-8.5483
chr17	85105373	85106470	protein_coding	Lrpprc	exon	ENSMUSG00000024120	ProperStrand	98	chr4	131908236	131908293	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.7866
chr2	158184096	158184196	snoRNA	ENSMUSG00000064995_SNORA71	.	ENSMUSG00000064995	ProperStrand	430	chr2	166890547	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-3.7378
chr15	103065711	103065801	protein_coding	Cbx5	intron	ENSMUSG00000009575	ProperStrand	98	chr16	4094283	4094678	protein_coding	Crebbp	exon	ENSMUSG00000022521	ProperStrand	56	1	-12.4666
chr19	7501974	7502059	protein_coding	Rtn3	utr3	ENSMUSG00000024758	ProperStrand	35	chr16	23110981	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.8578
chr11	60611035	60611125	protein_coding	Shmt1	exon	ENSMUSG00000020534	ProperStrand	60	chr18	35714194	35714274	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-3.4429
chr2	180445448	180445538	protein_coding	2310003C23Rik	intron	ENSMUSG00000027573	ProperStrand	25	chr4	131908275	131908355	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-4.9856
chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	chr11	6428089	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-1.0028
chr18	10052131	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr2	84530865	84531297	protein_coding	Zdhhc5	exon	ENSMUSG00000034075	NonProperStrand	144	1	-7.0565
chr7	13516161	13516196	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr5	141217436	141217452	protein_coding	Amz1	exon	ENSMUSG00000050022	NonProperStrand	5	1	-13.8275
chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	chr7	54110419	54110452	protein_coding	Ldha	exon	ENSMUSG00000063229	ProperStrand	280	1	-5.5464
chr9	113823882	113823900	protein_coding	Clasp2	intron	ENSMUSG00000033392	ProperStrand	30	chr5	115939530	115939578	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-9.2593
chr2	51993072	51993117	protein_coding	Neb	intron	ENSMUSG00000026950	NonProperStrand	5	chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	1	-14.4384
chr11	69483174	69483254	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	NonProperStrand	35	chr18	35714191	35714281	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	NonProperStrand	47	1	-14.9087
chr9	48811101	48811141	protein_coding	Usp28	exon	ENSMUSG00000032267	ProperStrand	63	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-6.8860
chr3	99003132	99003156	protein_coding	Wars2	intron	ENSMUSG00000004233	NonProperStrand	48	chr2	164257636	164257652	protein_coding	Sdc4	intron	ENSMUSG00000017009	ProperStrand	177	1	-11.5928
chr6	122285040	122285072	protein_coding	Phc1	exon	ENSMUSG00000040669	ProperStrand	158	chr8	97971248	97971264	protein_coding	Csnk2a2	utr3	ENSMUSG00000046707	NonProperStrand	10	1	-15.0302
chr15	59166671	59184119	protein_coding	E430025E21Rik	exon	ENSMUSG00000022350	ProperStrand	18	chr4	131908689	131908892	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-8.2436
chr10	93953738	93953754	protein_coding	Tmcc3	intron	ENSMUSG00000020023	ProperStrand	23	chr10	23506278	23506347	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-8.8744
chr7	28150475	28150538	protein_coding	Spnb4	intron	ENSMUSG00000011751	ProperStrand	39	chr7	117189899	117189932	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.1353
chr13	8756715	8766307	protein_coding	Adarb2	utr3	ENSMUSG00000052551	ProperStrand	292	chr8	129468746	129468846	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-1.6447
chr8	119870213	119870313	protein_coding	4933407C03Rik	intron	ENSMUSG00000034390	ProperStrand	48	chrX	34622906	34622966	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-3.5794
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr17	35089181	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-1.3366
chr11	102060738	102060754	protein_coding	Hdac5	exon	ENSMUSG00000008855	NonProperStrand	39	chr2	26493435	26493471	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-4.5588
chr6	115876313	115876330	protein_coding	Ift122	exon	ENSMUSG00000030323	ProperStrand	20	chr5	115699066	115699090	protein_coding	Rnf10	exon	ENSMUSG00000041740	ProperStrand	95	1	-14.6190
chr19	3602388	3602405	protein_coding	Lrp5	exon	ENSMUSG00000024913	ProperStrand	145	chr1	162965531	162965596	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-3.2558
chr2	26233786	26233854	protein_coding	Snapc4	intron	ENSMUSG00000036281	ProperStrand	19	chr19	8800114	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-9.9305
chr5	102092856	102092872	protein_coding	Nkx6-1	exon	ENSMUSG00000035187	NonProperStrand	10	chr10	23505254	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.3364
chr2	59680967	59681047	protein_coding	Tanc1	exon	ENSMUSG00000035168	ProperStrand	80	chr12	106269284	106269374	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-3.6025
chr10	90581049	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	chr5	147646720	147646784	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	4	-3.0169
chr1	88886748	88886848	protein_coding	Dis3l2	exon	ENSMUSG00000053333	ProperStrand	20	chr11	68887043	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-6.2916
chrX	71517838	71517938	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	chr14	52829460	52829488	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-1.8396
chr12	113365215	113365305	protein_coding	Aspg	utr3	ENSMUSG00000037686	ProperStrand	19	chr9	120038468	120038548	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	13	-inf
chr1	181384942	181384959	protein_coding	Smyd3	intron	ENSMUSG00000055067	NonProperStrand	190	chr2	144087420	144087449	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-4.3073
chr16	13813829	13813876	protein_coding	Rrn3	utr3	ENSMUSG00000022682	ProperStrand	58	chrX	34622905	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	7	-inf
chr1	74350731	74350749	protein_coding	Pnkd	intron	ENSMUSG00000026179	ProperStrand	22	chr8	129468837	129468906	protein_coding	Tomm20	intron	ENSMUSG00000058779	ProperStrand	55	1	-15.5161
chr7	16534823	16534839	protein_coding	Ehd2	utr3	ENSMUSG00000074364	NonProperStrand	197	chr7	116664793	116664852	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-0.8029
chr11	100577375	100577465	protein_coding	Rab5c	exon	ENSMUSG00000019173	ProperStrand	76	chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	2	-11.8488
chr6	70805459	70805549	snoRNA	ENSMUSG00000065750_SNORA5	.	ENSMUSG00000065750	ProperStrand	165	chr3	123210917	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	5	-4.8892
chr17	28438155	28438255	protein_coding	Ppard	utr3	ENSMUSG00000002250	ProperStrand	25	chr16	23110965	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.2939
chr8	113984522	113984728	protein_coding	Wdr59	exon	ENSMUSG00000031959	ProperStrand	18	chr7	116663712	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-11.4450
chr3	96218469	96218549	misc_RNA	Telomerase-vert	.	ENSMUSG00000064796	ProperStrand	443	chr4	43505657	43505747	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	13	-14.6888
chr5	67365827	67365845	protein_coding	Limch1	exon	ENSMUSG00000037736	ProperStrand	20	chr18	35716765	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.1514
chr2	34629653	34629682	protein_coding	Hspa5	exon	ENSMUSG00000026864	ProperStrand	181	chr11	62418038	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	2	-5.8810
chr7	52713322	52713598	protein_coding	Ftl1	utr3	ENSMUSG00000050708	ProperStrand	807	chr5	130295414	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	7	-8.9881
chr5	115940292	115940406	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	chr18	35102298	35102343	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-2.3093
chr11	121084242	121090358	protein_coding	BC017643	utr5	ENSMUSG00000039294	ProperStrand	16	chr4	131908689	131908808	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-5.8984
chr13	9150306	9150340	protein_coding	Larp4b	exon	ENSMUSG00000033499	ProperStrand	53	chr7	118219574	118219634	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	4	-14.0764
chr17	87200450	87200468	protein_coding	Epas1	intron	ENSMUSG00000024140	NonProperStrand	4	chr17	35088969	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-11.5063
chr10	51865578	51865594	protein_coding	Ros1	exon	ENSMUSG00000019893	NonProperStrand	15	chr4	76614453	76614470	protein_coding	Ptprd	intron	ENSMUSG00000028399	ProperStrand	198	1	-13.7414
chr7	30811475	30811510	protein_coding	Zfp568	utr3	ENSMUSG00000074221	ProperStrand	110	chr4	131865865	131865955	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.9250
chr8	113411019	113411135	protein_coding	Fuk	exon	ENSMUSG00000033703	ProperStrand	18	chr9	15119734	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.8766
chr17	12875501	12939017	protein_coding	Igf2r	intron	ENSMUSG00000023830	ProperStrand	151	chr2	32818836	32818941	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	2	-6.2681
chr1	71644240	71660402	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr11	68886975	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	5	-2.5277
chr9	15119629	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	chr2	166890503	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	23	-12.9319
chr14	33153227	33153832	protein_coding	Ogdhl	exon	ENSMUSG00000021913	ProperStrand	182	chr11	77995189	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-4.0408
chr17	80599598	80599647	protein_coding	Srsf7	utr3	ENSMUSG00000024097	ProperStrand	31	chr11	97643003	97643045	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-9.1064
chr3	155453747	155453764	LINE	Lx4A	L1	chr3Lx4A155453308	ProperStrand	16	chr4	149090236	149090288	protein_coding	Tmem201	utr3	ENSMUSG00000044700	ProperStrand	60	1	-16.0227
chr6	119521622	119521640	protein_coding	Erc1	utr3	ENSMUSG00000030172	ProperStrand	69	chr11	62416602	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-8.0858
chr9	26807627	26811267	protein_coding	Thyn1	exon	ENSMUSG00000035443	ProperStrand	13	chr4	41150096	41150158	snoRNA	ENSMUSG00000089265_SNORD121A	.	ENSMUSG00000089265	ProperStrand	370	1	-12.7840
chr1	137993696	137993949	protein_coding	Cacna1s	exon	ENSMUSG00000026407	ProperStrand	7	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-11.3913
chr2	38442115	38442179	protein_coding	Nek6	utr3	ENSMUSG00000026749	ProperStrand	10	chr7	29136629	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-9.5349
chr15	103073103	103073406	protein_coding	Hnrnpa1	exon	ENSMUSG00000046434	ProperStrand	68	chr7	117166784	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-4.5754
chr2	63936035	63936053	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr9	40612830	40612920	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	3	-10.0813
chr11	116689164	116689252	protein_coding	Mxra7	exon	ENSMUSG00000020814	ProperStrand	2	chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	1	-16.9142
chr7	52958453	52958469	protein_coding	Car11	exon	ENSMUSG00000003273	NonProperStrand	250	chr1	162968442	162968459	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-3.3571
chr19	8963027	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	chr19	17900101	17900117	snoRNA	ENSMUSG00000089540_snoU13	.	ENSMUSG00000089540	ProperStrand	99	3	-4.3597
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr8	74446729	74446745	protein_coding	Zfp617	intron	ENSMUSG00000066880	NonProperStrand	208	1	-7.9426
chr13	9833552	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr4	45313455	45314163	protein_coding	Rg9mtd3	exon	ENSMUSG00000035601	ProperStrand	7	4	-inf
chr12	104317206	104317223	protein_coding	Unc79	exon	ENSMUSG00000021198	ProperStrand	99	chr5	30469263	30469328	protein_coding	Hadha	exon	ENSMUSG00000025745	ProperStrand	35	3	-inf
chr7	87622817	87622860	protein_coding	Blm	intron	ENSMUSG00000030528	ProperStrand	35	chr4	86232389	86232479	snoRNA	ENSMUSG00000088958_Scarna8	.	ENSMUSG00000088958	ProperStrand	366	1	-10.7780
chr12	77679519	77679609	protein_coding	Plekhg3	utr3	ENSMUSG00000052609	ProperStrand	19	chr2	26493405	26493485	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-5.9729
chr1	162968214	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	chr11	83107824	83107903	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	1	-2.5889
chr12	110888878	110888906	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr4	111928995	111929011	protein_coding	Skint3	intron	ENSMUSG00000070868	NonProperStrand	48	1	-9.1144
chr5	104272013	104272064	protein_coding	Aff1	exon	ENSMUSG00000029313	ProperStrand	82	chr10	23505155	23505203	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-1.7059
chr8	109181654	109181744	protein_coding	Cdh1	exon	ENSMUSG00000000303	ProperStrand	283	chr19	21899613	21900607	protein_coding	Tmem2	exon	ENSMUSG00000024754	ProperStrand	133	1	-8.6101
chr9	121298130	121298147	protein_coding	Trak1	intron	ENSMUSG00000032536	NonProperStrand	19	chr11	120491039	120491136	protein_coding	Mafg	exon	ENSMUSG00000051510	ProperStrand	23	1	-17.4393
chr11	115970986	115971003	protein_coding	Trim47	exon	ENSMUSG00000020773	ProperStrand	14	chr7	28960971	28961029	protein_coding	Fbl	exon	ENSMUSG00000046865	ProperStrand	52	1	-16.5938
chr5	74489228	74489328	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr11	48616659	48616706	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	1	-2.0017
chr2	110522893	110522909	protein_coding	Ano3	exon	ENSMUSG00000074968	ProperStrand	10	chr10	23505152	23505242	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-19.1815
chr1	157693444	157693479	protein_coding	Cep350	utr3	ENSMUSG00000033671	ProperStrand	48	chr16	23111451	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-4.6055
chrX	20253022	20253112	protein_coding	Uba1	exon	ENSMUSG00000001924	ProperStrand	156	chr8	114237452	114237532	protein_coding	Bcar1	exon	ENSMUSG00000031955	ProperStrand	44	1	-12.0217
chr2	144480284	144480364	protein_coding	Dtd1	intron	ENSMUSG00000027430	ProperStrand	9	chr15	7101072	7101162	protein_coding	Lifr	intron	ENSMUSG00000054263	ProperStrand	64	1	-16.9520
chrX	92620424	92620445	protein_coding	Fam123b	utr3	ENSMUSG00000050332	ProperStrand	57	chr18	35716784	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-8.3775
chr7	117189861	117189954	protein_coding	Ipo7	intron	ENSMUSG00000066232	NonProperStrand	9	chr7	117189911	117190058	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	NonProperStrand	17	5	-20.4620
chrX	97899386	97899402	protein_coding	Kif4	exon	ENSMUSG00000034311	ProperStrand	24	chr1	162966812	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-8.0918
chr2	105239247	105239313	protein_coding	Rcn1	exon	ENSMUSG00000005973	ProperStrand	24	chr8	55239640	55239658	protein_coding	Vegfc	intron	ENSMUSG00000031520	ProperStrand	3	1	-inf
chr9	108436284	108436347	protein_coding	Qrich1	exon	ENSMUSG00000006673	ProperStrand	30	chr3	68889052	68889142	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-4.5590
chr1	66555974	66555991	protein_coding	Unc80	exon	ENSMUSG00000055567	ProperStrand	3	chr4	131865855	131865977	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-13.1721
chr6	58793738	58793755	protein_coding	Herc3	exon	ENSMUSG00000029804	ProperStrand	6	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-6.1051
chr2	25298618	25298751	protein_coding	Abca2	exon	ENSMUSG00000026944	ProperStrand	57	chr5	121655051	121655151	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.8433
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr1	133724638	133724654	protein_coding	Slc41a1	utr5	ENSMUSG00000013275	ProperStrand	19	1	-8.2060
chr9	120037880	120037909	protein_coding	Rpsa	intron	ENSMUSG00000032518	ProperStrand	398	chr3	89750435	89750451	protein_coding	Atp8b2	exon	ENSMUSG00000060671	ProperStrand	140	1	-7.8302
chr9	78215882	78215937	protein_coding	Dppa5a	utr5	ENSMUSG00000060461	ProperStrand	79	chr14	33005064	33005139	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-3.4821
chr19	41992103	41992188	protein_coding	Pgam1	exon	ENSMUSG00000011752	ProperStrand	124	chrX	143918835	143918885	snoRNA	ENSMUSG00000084421_SNORA35	.	ENSMUSG00000084421	ProperStrand	293	1	-8.6808
chr15	80218919	80218935	protein_coding	Cacna1i	exon	ENSMUSG00000022416	ProperStrand	10	chr11	69402006	69402146	protein_coding	Trp53	exon	ENSMUSG00000059552	ProperStrand	47	1	-17.7383
chr12	88488443	88496424	protein_coding	Pomt2	exon	ENSMUSG00000034126	NonProperStrand	331	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-2.0913
chr17	39985195	39985500	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr1	88252837	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	5	-3.8227
chr4	56910496	56910596	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	chr7	65654694	65654765	tRNA	tRNA337-GluTTC	.	1681648	ProperStrand	13	1	-9.1930
chr5	108330898	108333739	protein_coding	Rpl5	exon	ENSMUSG00000058558	ProperStrand	235	chr11	6428059	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	13	-22.2281
chr4	106260577	106260634	protein_coding	Dhcr24	utr3	ENSMUSG00000034926	ProperStrand	94	chr16	23109049	23109093	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-6.3920
chr3	136526735	136526753	protein_coding	Ppp3ca	intron	ENSMUSG00000028161	NonProperStrand	120	chr6	71493895	71493950	protein_coding	Chmp3	utr5	ENSMUSG00000053119	ProperStrand	16	1	-14.6127
chr15	79399087	79399104	protein_coding	Dmc1	exon	ENSMUSG00000022429	ProperStrand	8	chr19	8798484	8798516	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-9.2953
chr15	7146321	7146376	protein_coding	Lifr	utr3	ENSMUSG00000054263	ProperStrand	64	chr11	69483136	69483236	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	7	-16.6376
chr2	179926855	179945926	protein_coding	Lama5	intron	ENSMUSG00000015647	ProperStrand	365	chr5	130300419	130300525	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	6	-3.6132
chr9	58505599	58505619	protein_coding	2410076I21Rik	exon	ENSMUSG00000074269	ProperStrand	91	chr8	129468753	129468879	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	12	-inf
chr13	107737212	107737228	protein_coding	Dimt1	utr5	ENSMUSG00000021692	ProperStrand	185	chr4	136158379	136158434	protein_coding	Kdm1a	exon	ENSMUSG00000036940	ProperStrand	83	1	-10.4023
chr9	70574413	70574430	protein_coding	Adam10	intron	ENSMUSG00000054693	NonProperStrand	7	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.7768
chr1	88423436	88423483	protein_coding	Ptma	utr5	ENSMUSG00000026238	ProperStrand	385	chr13	25266703	25266723	protein_coding	Dcdc2a	intron	ENSMUSG00000035910	NonProperStrand	9	1	-13.4793
chr2	104405017	104405117	lincRNA	4930500J02Rik	intron	ENSMUSG00000086454	ProperStrand	5	chr4	131865867	131865935	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-6.5022
chr7	132806535	132806578	protein_coding	Gtf3c1	exon	ENSMUSG00000032777	ProperStrand	161	chr5	74489642	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-2.0449
chrX	110156462	110156478	protein_coding	Chm	utr3	ENSMUSG00000025531	ProperStrand	9	chr15	79913298	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-11.9490
chr14	65366517	65366566	protein_coding	Kif13b	intron	ENSMUSG00000060012	ProperStrand	37	chr10	23505177	23505267	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.9550
chr14	54987487	54987522	protein_coding	Oxa1l	exon	ENSMUSG00000000959	ProperStrand	31	chr19	38869531	38869547	protein_coding	Noc3l	exon	ENSMUSG00000024999	NonProperStrand	149	1	-12.8221
chr11	79871360	79871376	protein_coding	Crlf3	exon	ENSMUSG00000017561	ProperStrand	47	chr4	116828389	116828451	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-8.8723
chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	chr12	30604781	30604797	protein_coding	Myt1l	exon	ENSMUSG00000061911	ProperStrand	38	1	-11.6850
chr2	90235319	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	95266597	95266613	protein_coding	Grm5	intron	ENSMUSG00000049583	NonProperStrand	145	1	-2.8369
chr3	95465018	95466782	protein_coding	Mcl1	utr3	ENSMUSG00000038612	ProperStrand	75	chr16	23110902	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-1.6350
chr11	60368340	60368403	protein_coding	Alkbh5	utr3	ENSMUSG00000042650	ProperStrand	203	chr3	107815502	107815602	protein_coding	Gstm1	utr3	ENSMUSG00000058135	ProperStrand	27	10	-inf
chr10	127832001	127832035	protein_coding	Ankrd52	intron	ENSMUSG00000014498	ProperStrand	26	chr2	106803545	106803594	protein_coding	2700007P21Rik	utr3	ENSMUSG00000027122	ProperStrand	8	3	-20.8115
chr7	134750834	134750909	protein_coding	Zfp629	utr3	ENSMUSG00000045639	ProperStrand	4	chr16	23111770	23111828	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-12.0512
chr5	38827914	38831894	protein_coding	Slc2a9	exon	ENSMUSG00000005107	NonProperStrand	3	chr3	123210882	123210972	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-8.0648
chr12	40399275	40399296	LINE	L1M3	L1	chr12L1M340398768	ProperStrand	1	chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	1	-inf
chr8	74208176	74208266	protein_coding	Jak3	exon	ENSMUSG00000031805	ProperStrand	24	chr7	117166734	117166814	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-6.6211
chr13	45009107	45009157	protein_coding	Jarid2	exon	ENSMUSG00000038518	ProperStrand	372	chr17	24665465	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-1.6961
chr7	52715011	52715101	protein_coding	Ftl1	utr5	ENSMUSG00000050708	ProperStrand	807	chr7	118219574	118219630	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-0.7665
chr10	70541952	70541969	protein_coding	Bicc1	exon	ENSMUSG00000014329	ProperStrand	13	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-6.1494
chr17	57161950	57162018	protein_coding	Khsrp	utr3	ENSMUSG00000007670	ProperStrand	353	chr1	162968244	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	2	-5.8066
chr8	87223289	87223339	protein_coding	Trmt1	exon	ENSMUSG00000001909	ProperStrand	88	chr7	52382754	52382829	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-5.9959
chr3	83570908	83570947	protein_coding	Sfrp2	exon	ENSMUSG00000027996	ProperStrand	3	chr17	35299507	35299593	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-11.0713
chr4	83241429	83241447	protein_coding	4930473A06Rik	intron	ENSMUSG00000052407	ProperStrand	19	chr2	26494780	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.2936
chr8	126464934	126464984	protein_coding	Nup133	exon	ENSMUSG00000039509	ProperStrand	59	chr7	95266597	95266613	protein_coding	Grm5	intron	ENSMUSG00000049583	NonProperStrand	145	1	-11.5757
chr4	118804872	118805131	protein_coding	Slc2a1	exon	ENSMUSG00000028645	ProperStrand	361	chr1	162968460	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-2.7045
chr9	64024930	64024981	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	chr8	129468745	129468838	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-0.9577
chr3	58343463	58343520	protein_coding	Eif2a	exon	ENSMUSG00000027810	ProperStrand	11	chr17	24857716	24857806	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-5.4831
chr17	79207673	79207763	protein_coding	Heatr5b	exon	ENSMUSG00000039414	ProperStrand	27	chr4	131908815	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.4692
chr14	56159295	56159311	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-2.9550
chr19	32234106	32234161	protein_coding	Sgms1	exon	ENSMUSG00000040451	ProperStrand	10	chr4	41158541	41158579	snoRNA	ENSMUSG00000089308_SNORD121A	.	ENSMUSG00000089308	ProperStrand	209	3	-20.9020
chr12	32086119	32086137	protein_coding	Slc26a3	intron	ENSMUSG00000001225	NonProperStrand	3	chr10	110918520	110918610	protein_coding	Nap1l1	intron	ENSMUSG00000058799	ProperStrand	185	2	-inf
chr15	31521737	31521817	protein_coding-noncoding	Cct5	utr3	ENSMUSG00000022234	ProperStrand	14	chr15	31521617	31521707	protein_coding	Cct5	intron	ENSMUSG00000022234	ProperStrand	116	13	-inf
chr11	100752027	100752127	protein_coding	Stat3	intron	ENSMUSG00000004040	ProperStrand	20	chr2	91436260	91436336	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-9.7140
chr15	76735433	76736311	protein_coding	Rpl8	exon	ENSMUSG00000003970	ProperStrand	191	chr11	5180669	5180685	protein_coding	Znrf3	utr3	ENSMUSG00000041961	NonProperStrand	210	1	-8.4828
chr8	81645746	81645782	protein_coding	Zfp827	intron	ENSMUSG00000071064	ProperStrand	78	chr10	90581034	90581129	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	5	-17.4465
chr8	13416896	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr11	62418015	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	3	-1.1441
chr19	24183172	24183198	protein_coding	Tjp2	exon	ENSMUSG00000024812	ProperStrand	63	chr16	23111454	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.1926
chr18	54582045	54582061	lincRNA	9430076G02Rik	exon	ENSMUSG00000084814	ProperStrand	30	chr8	73419662	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.4253
chr2	32781399	32781415	protein_coding	Lrsam1	utr3	ENSMUSG00000026792	ProperStrand	80	chr16	23110455	23110522	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-3.5941
chr3	72724877	72724893	protein_coding	Sis	exon	ENSMUSG00000027790	ProperStrand	2	chr10	23505204	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-8.0476
chr6	119309073	119309369	protein_coding	Adipor2	exon	ENSMUSG00000030168	ProperStrand	79	chr18	35716685	35716763	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-4.9172
chr8	98276430	98276508	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	chr9	120039568	120039658	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	3	-2.6061
chr1	75597841	75597860	SINE	RSINE1	B4	chr1RSINE175597808	NonProperStrand	1	chr9	15119650	15119712	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-inf
chr5	134714251	134714300	protein_coding	Gtf2i	utr3	ENSMUSG00000060261	ProperStrand	41	chr10	23505172	23505262	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.7922
chr9	56266647	56266665	protein_coding	Hmg20a	utr5	ENSMUSG00000032329	ProperStrand	87	chr19	8963086	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.6806
chr5	36236034	36236114	protein_coding	Afap1	utr5	ENSMUSG00000029094	ProperStrand	11	chr2	26493361	26493451	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-7.0863
chr19	32464273	32464289	lincRNA	2700046G09Rik	exon	ENSMUSG00000024893	ProperStrand	59	chr7	52382754	52382832	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-6.7852
chr3	89857469	89857485	protein_coding	4933434E20Rik	exon	ENSMUSG00000027942	ProperStrand	19	chr19	8800378	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	4	-17.8748
chr14	15572353	15572371	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr5	58110582	58110599	protein_coding	Pcdh7	exon	ENSMUSG00000029108	ProperStrand	8	1	-15.3888
chr2	150596807	150596892	protein_coding	Entpd6	utr3	ENSMUSG00000033068	ProperStrand	12	chr3	88715214	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-10.5024
chr2	138188029	138188045	protein_coding	Btbd3	intron	ENSMUSG00000062098	NonProperStrand	121	chr19	8963027	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-2.3258
chr12	96699690	96699780	LTR	ORR1B1	MaLR	chr12ORR1B196699552	ProperStrand	1	chr12	96699863	96699953	SINE	B1_Mus1	Alu	chr12B1_Mus196699876	ProperStrand	1	1	-inf
chr9	65127126	65127142	protein_coding	Cilp	exon	ENSMUSG00000042254	ProperStrand	212	chr18	73693114	73693136	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-3.1415
chr3	85942749	85942780	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	chr8	113366286	113366310	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	3	-13.0148
chr7	148341464	148341537	protein_coding	Ptdss2	utr3	ENSMUSG00000025495	ProperStrand	29	chr17	27768190	27769241	protein_coding	Rps10	exon	ENSMUSG00000052146	ProperStrand	94	1	-13.8781
chr5	130357070	130357109	protein_coding	Chchd2	utr3	ENSMUSG00000070493	ProperStrand	16	chr4	131908236	131908321	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-9.2689
chr5	127970647	127970666	protein_coding	Tmem132c	intron	ENSMUSG00000034324	ProperStrand	25	chr1	88247836	88247875	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-6.8271
chr1	84692463	84692480	miRNA	Mir5126	.	ENSMUSG00000093254	ProperStrand	15	chr11	60562925	60563008	protein_coding	Top3a	exon	ENSMUSG00000002814	ProperStrand	28	1	-17.4793
chr4	49656271	49656311	protein_coding	Rnf20	intron	ENSMUSG00000028309	ProperStrand	58	chr7	29136551	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-6.4471
chr14	119352337	119352353	protein_coding	Dnajc3	exon	ENSMUSG00000022136	ProperStrand	10	chr18	35716763	35716786	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-5.5279
chr1	173957228	173957328	protein_coding	Vangl2	utr5	ENSMUSG00000026556	ProperStrand	37	chr1	162967510	162967566	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	3	-10.5793
chr15	78273745	78273762	protein_coding	Tmprss6	intron	ENSMUSG00000016942	ProperStrand	7	chr7	116664869	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-6.7161
chr14	62003503	62003545	protein_coding	Kpna3	exon	ENSMUSG00000021929	ProperStrand	14	chr9	96243736	96246225	protein_coding	Atp1b3	exon	ENSMUSG00000032412	ProperStrand	20	1	-18.9819
chr9	40611280	40611318	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr19	8963032	8963048	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-5.0369
chr19	8800355	8800444	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	chr7	52382234	52382315	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	4	-1.4495
chr19	5844594	5844654	non_coding	Neat1	.	ENSMUSG00000092274	ProperStrand	63	chr5	121655127	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-6.2002
chr1	165185556	165185572	protein_coding	Prrx1	utr3	ENSMUSG00000026586	NonProperStrand	28	chr2	130103751	130103805	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-10.0080
chr7	152109158	152109216	protein_coding	Oraov1	intron	ENSMUSG00000031072	ProperStrand	4	chr16	23110967	23111010	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.6489
chr1	71614459	71615582	protein_coding	Atic	exon	ENSMUSG00000026192	ProperStrand	30	chr7	148634780	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-5.3210
chr19	44188396	44188493	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	NonProperStrand	9	chr16	57391724	57391770	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	1	-14.1923
chr7	118219899	118220250	protein_coding	Eif4g2	exon	ENSMUSG00000005610	NonProperStrand	30	chr10	62486272	62486378	protein_coding	Hnrnph3	intron	ENSMUSG00000020069	NonProperStrand	6	2	-19.6078
chr9	64024787	64026229	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	chr1	162967491	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	7	-4.8811
chr1	59761626	59761717	snoRNA	ENSMUSG00000089093_Snord11	.	ENSMUSG00000089093	ProperStrand	193	chr3	123210894	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	4	-2.9924
chr9	72583022	72584478	protein_coding	Nedd4	exon	ENSMUSG00000032216	ProperStrand	308	chr3	103850853	103850892	protein_coding	Magi3	exon	ENSMUSG00000052539	ProperStrand	19	2	-18.8853
chr9	59504431	59513071	protein_coding	Pkm2	utr5	ENSMUSG00000032294	ProperStrand	1296	chr9	110842663	110842711	protein_coding	Tdgf1	utr3	ENSMUSG00000032494	ProperStrand	218	1	-4.6554
chr7	95479295	95479313	SINE	RSINE1	B4	chr7RSINE195479179	ProperStrand	1	chr1	95326775	95326828	protein_coding	Hdlbp	exon	ENSMUSG00000034088	ProperStrand	97	1	-inf
chr11	49651312	49651375	protein_coding	Gfpt2	utr3	ENSMUSG00000020363	ProperStrand	11	chr19	44188455	44188532	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	1	-11.2504
chr2	167468867	167468988	protein_coding	Tmem189	utr3	ENSMUSG00000090213	ProperStrand	6	chr5	125889876	125889915	tRNA	tRNA702-AlaTGC	.	559477	ProperStrand	10	1	-19.0093
chr11	64846389	64846414	protein_coding	Arhgap44	intron	ENSMUSG00000033389	ProperStrand	28	chr12	88488443	88496424	protein_coding	Pomt2	exon	ENSMUSG00000034126	NonProperStrand	331	1	-11.4313
chr7	38468013	38468033	protein_coding	Zfp536	intron	ENSMUSG00000043456	ProperStrand	57	chr5	108334271	108334329	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	3	-11.6341
chr7	19781901	19781944	protein_coding	Eml2	exon	ENSMUSG00000040811	ProperStrand	33	chr17	24857716	24857806	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.3507
chr5	122854181	122854245	protein_coding	Arpc3	exon	ENSMUSG00000029465	ProperStrand	6	chr9	15119629	15119729	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-7.1405
chr15	84768862	84770131	protein_coding	Nup50	exon	ENSMUSG00000016619	ProperStrand	39	chr6	71832550	71832574	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-6.4612
chr5	92531300	92531319	pseudogene	Gm15710	.	ENSMUSG00000084111	NonProperStrand	12	chr5	108336462	108336487	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-13.0371
mmu-miR-6240	2	23	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr4	133742939	133742956	protein_coding	Ccdc21	utr5	ENSMUSG00000037443	ProperStrand	112	1	-4.6912
chr4	82870968	82871017	protein_coding	Ttc39b	utr3	ENSMUSG00000038172	ProperStrand	78	chr16	19883899	19884021	protein_coding	A930003A15Rik	exon	ENSMUSG00000075330	ProperStrand	93	1	-11.9054
chr8	48636465	48636481	protein_coding	Rwdd4a	utr3	ENSMUSG00000031568	NonProperStrand	5	chr7	87451331	87452449	protein_coding	Prc1	exon	ENSMUSG00000038943	ProperStrand	35	1	-18.9937
chr8	11160613	11160633	LTR	MTE2a	MaLR	chr8MTE2a11160360	ProperStrand	1	chr7	116663634	116663724	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-inf
chr14	70187288	70187378	protein_coding	Rhobtb2	utr3	ENSMUSG00000022075	ProperStrand	22	chr9	15119320	15119400	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-7.0967
chr9	14158825	14158845	protein_coding	Endod1	utr3	ENSMUSG00000037419	NonProperStrand	5	chr15	79908957	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-10.5905
chr16	9738867	9738889	protein_coding	Grin2a	intron	ENSMUSG00000059003	NonProperStrand	15	chr9	120038571	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.6922
mmu-miR-6238	2	22	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr15	98350187	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-2.2433
chr2	90235316	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	44215779	44215796	protein_coding	Triml1	exon	ENSMUSG00000031651	NonProperStrand	1	1	-inf
chr7	134461557	134461637	protein_coding	Itgal	intron	ENSMUSG00000030830	ProperStrand	38	chr8	129468745	129468835	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-5.2970
chr2	127739679	127739695	protein_coding	Acoxl	intron	ENSMUSG00000027380	NonProperStrand	12	chr1	95326727	95326768	protein_coding	Hdlbp	exon	ENSMUSG00000034088	ProperStrand	97	1	-15.6553
chr2	49134289	49134305	protein_coding	Mbd5	exon	ENSMUSG00000036792	NonProperStrand	25	chr8	109410859	109410883	protein_coding	Chtf8	utr5	ENSMUSG00000046691	ProperStrand	33	1	-16.2280
chr11	116535464	116535533	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr5	36043277	36043323	protein_coding	Sh3tc1	exon	ENSMUSG00000036553	ProperStrand	16	4	-20.1232
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr1	155287307	155287354	snoRNA	ENSMUSG00000064435_SNORA4	.	ENSMUSG00000064435	ProperStrand	263	3	-16.6925
chr3	108237111	108238842	protein_coding	Sars	exon	ENSMUSG00000068739	ProperStrand	45	chr13	101468097	101468114	protein_coding	Cdk7	utr3	ENSMUSG00000069089	ProperStrand	12	2	-inf
chr1	88253773	88253790	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chr9	105946597	105950049	protein_coding	Col6a4	exon	ENSMUSG00000032572	ProperStrand	22	1	-9.3781
chr13	73746368	73746388	protein_coding	Clptm1l	exon	ENSMUSG00000021610	ProperStrand	11	chr13	54848608	54848624	protein_coding	Gprin1	intron	ENSMUSG00000069227	ProperStrand	55	1	-16.9309
chr7	13623019	13623051	protein_coding	Ube2m	exon	ENSMUSG00000005575	ProperStrand	5	chr5	74489543	74489663	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	3	-19.2102
chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	chr11	109096148	109096187	protein_coding	Rgs9	intron	ENSMUSG00000020599	ProperStrand	18	1	-12.3166
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr7	51505506	51505564	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	1	-3.5804
chr11	70542744	70542805	protein_coding	Kif1c	utr3	ENSMUSG00000020821	ProperStrand	26	chr9	108594652	108594669	protein_coding	Prkar2a	utr5	ENSMUSG00000032601	ProperStrand	43	1	-15.6927
chr11	115359298	115359417	protein_coding	Hn1	utr3	ENSMUSG00000020737	ProperStrand	18	chr1	162965558	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.5840
chr2	156368131	156368149	protein_coding	Epb4.1l1	utr3	ENSMUSG00000027624	ProperStrand	27	chr9	15119664	15119767	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.0899
chr2	112204332	112204432	protein_coding	Tmem85	exon	ENSMUSG00000027131	ProperStrand	19	chr11	68887035	68887063	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	2	-10.4128
chr12	110888851	110888911	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr1	180932679	180932751	protein_coding	Smyd3	intron	ENSMUSG00000055067	ProperStrand	231	2	-9.7330
chr19	36466688	36466705	protein_coding	Pcgf5	intron	ENSMUSG00000024805	ProperStrand	6	chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	1	-16.1386
chr18	10052128	10052151	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr15	37919062	37919116	protein_coding	Ubr5	exon	ENSMUSG00000037487	ProperStrand	258	2	-9.6055
chr18	47150883	47150983	protein_coding	Commd10	intron	ENSMUSG00000042705	ProperStrand	6	chr5	130300531	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-7.0019
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr17	6232006	6232022	protein_coding	Tulp4	exon	ENSMUSG00000034377	NonProperStrand	265	1	-10.1746
chr3	107883034	107883087	protein_coding	Ampd2	exon	ENSMUSG00000027889	ProperStrand	10	chr5	147274433	147274480	protein_coding	Wasf3	intron	ENSMUSG00000029636	ProperStrand	32	1	-18.1595
chr5	36308195	36308285	protein_coding	Afap1	intron	ENSMUSG00000029094	ProperStrand	11	chr19	8800396	8800476	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-6.8583
chr9	115076366	115076397	protein_coding	Osbpl10	exon	ENSMUSG00000040875	ProperStrand	6	chr8	73419716	73419782	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-7.7047
chr14	67691037	67691089	protein_coding	Ppp2r2a	utr5	ENSMUSG00000022052	ProperStrand	45	chr15	98350146	98350204	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-5.3188
chr15	82980125	82980226	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr17	35088957	35089018	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	3	-2.3528
chr18	43552884	43552900	protein_coding	Dpysl3	utr5	ENSMUSG00000024501	ProperStrand	9	chr14	35550461	35550561	protein_coding	Wapal	exon	ENSMUSG00000041408	ProperStrand	93	1	-16.3009
chr17	24665465	24665488	protein_coding	Rab26	intron	ENSMUSG00000079657	ProperStrand	11	chr16	23111739	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	NonProperStrand	47	2	-inf
chr10	80078435	80078454	protein_coding	Scamp4	utr3	ENSMUSG00000078441	NonProperStrand	20	chr16	23110983	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.6223
chr11	97888591	97888608	protein_coding	Rpl19	intron	ENSMUSG00000017404	NonProperStrand	9	chr4	137070531	137070588	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	2	-18.4017
chr9	56951680	56951708	protein_coding	Sin3a	exon	ENSMUSG00000042557	ProperStrand	108	chr4	62978525	62978541	protein_coding	Col27a1	exon	ENSMUSG00000045672	ProperStrand	32	1	-13.4042
chr4	146346266	146346356	protein_coding	Gm13150	intron	ENSMUSG00000086147	ProperStrand	15	chr7	116663634	116663740	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	15	-inf
chr2	131994715	131994733	antisense	Gm14051	.	ENSMUSG00000086756	ProperStrand	3	chr4	131865938	131865968	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.6896
chr11	49698861	49698904	protein_coding	Mapk9	utr3	ENSMUSG00000020366	ProperStrand	20	chr1	162966209	162966252	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-9.7933
chr2	41199972	41199989	protein_coding	Lrp1b	exon	ENSMUSG00000049252	ProperStrand	376	chr11	69480945	69481026	protein_coding	Eif4a1	utr3	ENSMUSG00000059796	ProperStrand	108	1	-8.4601
chr10	39368563	39368616	lincRNA	E130307A14Rik	intron	ENSMUSG00000087177	ProperStrand	14	chr9	15118334	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-6.2956
chr15	80842309	80842325	protein_coding	Sgsm3	utr3	ENSMUSG00000042303	ProperStrand	11	chr16	23111420	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-10.4700
chr11	6315875	6319264	protein_coding	Ppia	utr5	ENSMUSG00000071866	ProperStrand	127	chr16	23111387	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	7	-6.2637
chr2	73248552	73248569	lincRNA	D230022J07Rik	intron	ENSMUSG00000087176	ProperStrand	5	mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	1	-11.0330
chr17	31722744	31722760	protein_coding	Pknox1	intron	ENSMUSG00000006705	ProperStrand	110	chr4	116827119	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-5.8440
chr2	86138158	86138174	protein_coding	Olfr1052	exon	ENSMUSG00000047149	NonProperStrand	119	chr9	50420518	50420560	protein_coding	AU019823	exon	ENSMUSG00000059820	ProperStrand	5	1	-17.0011
chr5	31505185	31505285	protein_coding	Ppm1g	utr3	ENSMUSG00000029147	ProperStrand	69	chr1	162967493	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	6	-17.1316
chr7	29928138	29930243	protein_coding	Rasgrp4	exon	ENSMUSG00000030589	ProperStrand	2	chr7	29136634	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-9.5181
chr2	121132697	121132755	protein_coding	Mtap1a	exon	ENSMUSG00000027254	ProperStrand	17	chr6	88435849	88435865	protein_coding	Ruvbl1	exon	ENSMUSG00000030079	NonProperStrand	54	1	-16.1044
chr16	20645718	20645734	protein_coding	Ece2	utr3	ENSMUSG00000022842	NonProperStrand	4	chr18	35716685	35716745	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-7.5042
mmu-miR-1949	5	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr12	83293036	83293121	protein_coding	Sipa1l1	intron	ENSMUSG00000042700	ProperStrand	84	5	-inf
chr12	111932519	111932836	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr10	39978350	39978430	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-1.0851
chr5	114227953	114227982	protein_coding	Iscu	utr3	ENSMUSG00000025825	ProperStrand	15	chr4	131908689	131908807	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.5353
chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr11	55296195	55296333	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	14	-1.9474
chr7	121413252	121413321	protein_coding	Psma1	exon	ENSMUSG00000030751	ProperStrand	9	chr6	71832550	71832573	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-9.4562
chr11	95823823	95823923	protein_coding	Igf2bp1	utr3	ENSMUSG00000013415	ProperStrand	140	chr18	73693110	73693133	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-3.9013
chr11	17098698	17098715	protein_coding	Ppp3r1	utr3	ENSMUSG00000033953	ProperStrand	10	chr7	51505224	51505289	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	1	-11.8101
chr13	107769075	107769592	protein_coding	Kif2a	exon	ENSMUSG00000021693	ProperStrand	32	chr11	68887038	68887063	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	4	-16.5754
chr12	70970609	70970627	protein_coding	Map4k5	intron	ENSMUSG00000034761	NonProperStrand	5	chr16	23110828	23110874	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr12	86683957	86684035	protein_coding	Tmed10	utr3	ENSMUSG00000021248	ProperStrand	34	chr14	51684839	51684879	tRNA	tRNA704-ThrTGT	.	767626	ProperStrand	30	1	-15.8716
chr18	5956791	5956881	LTR	ORR1C2	MaLR	chr18ORR1C25956812	ProperStrand	1	chr9	62907806	62907886	SINE	B3A	B2	chr9B3A62907744	ProperStrand	1	1	-inf
chr11	62416575	62416653	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	chr2	26493364	26493507	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	25	-5.6960
chr8	11522109	11522190	protein_coding	Cars2	utr3	ENSMUSG00000056228	ProperStrand	17	chr16	23111373	23111463	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.3471
chr14	77424372	77424388	protein_coding	9030625A04Rik	utr3	ENSMUSG00000044350	NonProperStrand	152	chr15	98670226	98670309	protein_coding	Mll2	exon	ENSMUSG00000048154	ProperStrand	170	1	-9.3598
chr1	95468382	95468399	protein_coding	Farp2	intron	ENSMUSG00000034066	NonProperStrand	8	chr17	13115655	13115746	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	1	-11.6603
chr2	37502726	37502742	protein_coding	Strbp	utr5	ENSMUSG00000026915	ProperStrand	90	chr19	37359710	37359727	protein_coding	Ide	exon	ENSMUSG00000056999	ProperStrand	19	1	-14.8372
chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	chr5	19284183	19284199	protein_coding	Magi2	intron	ENSMUSG00000040003	ProperStrand	49	1	-11.1715
chr4	107740626	107740646	protein_coding	Scp2	intron	ENSMUSG00000028603	ProperStrand	23	chr16	3979432	3979448	protein_coding	Slx4	utr3	ENSMUSG00000039738	NonProperStrand	6	1	-18.5851
chr2	34959883	34959974	DNA	URR1B	MER1_type	chr2URR1B34959762	NonProperStrand	14	chr7	148634714	148634794	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	14	-inf
chr7	151765212	151765228	antisense	Gm10574	.	ENSMUSG00000073778	ProperStrand	357	chr15	82026628	82026679	protein_coding	Srebf2	exon	ENSMUSG00000022463	ProperStrand	592	1	-5.2114
chr10	75925691	75925763	protein_coding	Ybey	utr3	ENSMUSG00000033126	ProperStrand	3	chr9	64023265	64023329	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	1	-14.8097
chr11	48560610	48560627	LINE	L1MB5	L1	chr11L1MB548560565	NonProperStrand	1	chr6	30441095	30441118	protein_coding	Tmem209	exon	ENSMUSG00000029782	ProperStrand	36	1	-inf
chr11	115384628	115384673	protein_coding	Sumo2	utr3	ENSMUSG00000020738	ProperStrand	24	chr16	23111430	23111450	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	5	-12.7174
chr1	75189117	75189145	processed_transcript	Ankzf1	.	ENSMUSG00000026199	ProperStrand	69	chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-5.5685
chr12	17552949	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr2	130101266	130101310	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	4	-1.3769
chr16	96221599	96221689	protein_coding	Brwd1	utr3	ENSMUSG00000022914	ProperStrand	77	chr9	120039539	120039619	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.8709
chr1	158585278	158585325	protein_coding	Tor3a	utr3	ENSMUSG00000060519	ProperStrand	30	chr10	23505152	23505257	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.3011
chr5	121181156	121181172	protein_coding	Oas2	utr3	ENSMUSG00000032690	NonProperStrand	8	chr4	131908812	131908871	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.7736
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	121823892	121823908	protein_coding	Cyp8b1	exon	ENSMUSG00000050445	NonProperStrand	101	1	-3.4865
chr17	35381154	35389744	protein_coding	Ddx39b	exon	ENSMUSG00000019432	ProperStrand	119	chr4	131908237	131908421	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-1.2503
chr11	3991632	3991649	protein_coding	Mtfp1	utr3	ENSMUSG00000004748	ProperStrand	2	chr10	110918596	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-10.7503
chr1	183141737	183141772	protein_coding	Wdr26	utr5	ENSMUSG00000038733	ProperStrand	9	chr1	192712615	192712631	protein_coding	Rps6kc1	exon	ENSMUSG00000089872	ProperStrand	241	1	-14.4164
chr19	5799773	5799835	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr1	93263060	93263076	protein_coding	Fam132b	exon	ENSMUSG00000047443	NonProperStrand	98	1	-6.5707
chr7	35216701	35216718	LINE	L1M4b	L1	chr7L1M4b35216550	ProperStrand	31	chr19	8963027	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.4420
chr14	75730216	75730243	protein_coding	Zc3h13	exon	ENSMUSG00000022000	ProperStrand	42	chr16	23110527	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.0882
chr4	131865380	131865515	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	chr8	113362430	113362491	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	2	-1.5856
chr18	10052133	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr6	145764118	145764134	protein_coding	Rassf8	exon	ENSMUSG00000030259	ProperStrand	23	1	-10.7388
chr18	42708162	42728308	protein_coding	Tcerg1	exon	ENSMUSG00000024498	ProperStrand	210	chr4	131908236	131908346	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	5	-2.1686
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr10	60692417	60692433	protein_coding	Adamts14	exon	ENSMUSG00000059901	NonProperStrand	127	1	-7.0989
chr13	55415884	55415974	protein_coding	Nsd1	utr3	ENSMUSG00000021488	ProperStrand	186	chr10	90581034	90581114	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	6	-15.1191
chr6	128380740	128380800	protein_coding	Fkbp4	utr3	ENSMUSG00000030357	ProperStrand	114	chr1	155287318	155287355	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	2	-12.3054
chr1	90123798	90124639	protein_coding	Heatr7b1	utr5	ENSMUSG00000079429	ProperStrand	147	chr2	130103751	130103799	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-6.6894
chr19	53084613	53086305	protein_coding	Xpnpep1	exon	ENSMUSG00000025027	ProperStrand	49	chrX	59544049	59544066	protein_coding	4933402E13Rik	exon	ENSMUSG00000045330	NonProperStrand	6	1	-18.7927
chr14	55515814	55515858	protein_coding	Pabpn1	exon	ENSMUSG00000022194	ProperStrand	22	chr16	23111389	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.8747
chr1	107743298	107743315	protein_coding	Tnfrsf11a	utr3	ENSMUSG00000026321	NonProperStrand	100	chr2	26494708	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	5	-10.6674
chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	chr11	120439870	120439926	protein_coding	Arhgdia	utr3	ENSMUSG00000025132	ProperStrand	39	1	-10.1373
chr17	17715821	17715878	protein_coding	Lnpep	exon	ENSMUSG00000023845	ProperStrand	23	chr8	37895872	37895889	protein_coding	Dlc1	intron	ENSMUSG00000031523	ProperStrand	89	1	-14.4638
chr5	143666079	143666157	protein_coding	Actb	exon	ENSMUSG00000029580	ProperStrand	446	chr1	138178661	138178677	protein_coding	Camsap2	exon	ENSMUSG00000041570	NonProperStrand	116	1	-7.9784
chr10	7360597	7364205	protein_coding	Pcmt1	exon	ENSMUSG00000019795	ProperStrand	55	chr14	56159295	56159314	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	1	-11.1142
chr13	9833565	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr7	16524110	16524158	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	1	-1.7528
chrX	93136011	93136027	protein_coding	Las1l	exon	ENSMUSG00000057421	ProperStrand	248	chr17	24856624	24856688	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-3.6967
chrX	20489022	20489042	protein_coding	Syn1	intron	ENSMUSG00000037217	ProperStrand	9	chr4	131865891	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-8.7951
chr1	136307632	136307700	protein_coding	Cyb5r1	utr3	ENSMUSG00000026456	ProperStrand	12	chr6	37907118	37907554	protein_coding	Trim24	exon	ENSMUSG00000029833	ProperStrand	27	1	-18.3228
chr2	129998656	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr19	8799063	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	2	-2.3717
chr2	59221564	59221644	lincRNA	5330411J11Rik	exon	ENSMUSG00000087455	ProperStrand	5	chr4	82878690	82883193	protein_coding	Ttc39b	exon	ENSMUSG00000038172	ProperStrand	78	4	-23.2768
chr5	151865879	151865979	protein_coding	Stard13	exon	ENSMUSG00000016128	ProperStrand	11	chr9	72594280	72594987	protein_coding	Nedd4	exon	ENSMUSG00000032216	ProperStrand	308	1	-13.5001
chr6	55258160	55258205	protein_coding	Fam188b	exon	ENSMUSG00000038022	ProperStrand	7	chr16	23111373	23111463	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-12.6567
chr15	8103161	8103196	protein_coding	Nup155	exon	ENSMUSG00000022142	ProperStrand	91	chr2	4829164	4829180	protein_coding	Sephs1	utr3	ENSMUSG00000026662	NonProperStrand	271	1	-9.4550
chr2	22444876	22445099	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	chr11	69483189	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	8	-0.9650
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr18	35716685	35716762	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	5	-1.4377
chr1	88248601	88248662	snoRNA	ENSMUSG00000064696_SNORD20	.	ENSMUSG00000064696	ProperStrand	89	chr3	88497900	88497983	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-6.6770
chr1	72895724	72895774	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	chr11	69483136	69483184	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-0.8622
chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	chr12	58643588	58643606	protein_coding	Foxa1	exon	ENSMUSG00000035451	ProperStrand	25	1	-11.8456
chr15	95050371	95050387	protein_coding	Nell2	utr3	ENSMUSG00000022454	ProperStrand	64	chr4	116827118	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-6.9120
chr1	34864226	34864271	protein_coding-noncoding	Arhgef4	utr5	ENSMUSG00000037509	ProperStrand	7	chr16	23110909	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	7	-inf
chr9	41871858	41872074	protein_coding	Sorl1	exon	ENSMUSG00000049313	ProperStrand	112	chr4	99429043	99429084	protein_coding	Alg6	utr3	ENSMUSG00000073792	ProperStrand	7	2	-inf
chr2	34660113	34660136	protein_coding-noncoding	Fbxw2	utr3	ENSMUSG00000035949	ProperStrand	6	chr1	162965984	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-8.2222
chr10	120288388	120288407	protein_coding	Msrb3	intron	ENSMUSG00000051236	ProperStrand	24	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.0142
chr13	107619321	107619420	protein_coding	Ipo11	intron	ENSMUSG00000042590	ProperStrand	120	chr15	34370545	34370596	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-2.3242
chr1	173999056	173999175	protein_coding	Ncstn	intron	ENSMUSG00000003458	ProperStrand	20	chr4	131908688	131908722	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.0012
chr7	150481802	150481820	protein_coding	Kcnq1	intron	ENSMUSG00000009545	NonProperStrand	133	chr9	15119638	15119728	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.3647
chrX	109753128	109753144	protein_coding	Pof1b	utr3	ENSMUSG00000034607	ProperStrand	1	chr7	149170855	149171340	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	1	-inf
chr7	95266597	95266613	protein_coding	Grm5	intron	ENSMUSG00000049583	NonProperStrand	145	chr15	79913296	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.0515
chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	chr15	98356818	98356901	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	2	-8.1879
chr16	50643773	50643795	LTR	LTR37B	ERV1	chr16LTR37B50643615	NonProperStrand	1	chr8	129468844	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-inf
chr1	87745802	87745861	protein_coding	Cab39	utr3	ENSMUSG00000036707	ProperStrand	45	chr3	123210941	123210996	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.5489
chr1	88203717	88203766	protein_coding	B3gnt7	utr3	ENSMUSG00000079445	ProperStrand	13	chr10	110918634	110918693	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-10.5042
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr6	71832629	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-1.5998
chr4	141254730	141259036	protein_coding	Ddi2	exon	ENSMUSG00000078515	ProperStrand	79	chr17	35299507	35299607	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-4.2515
chr15	82052659	82052708	protein_coding	Tnfrsf13c	utr3	ENSMUSG00000068105	ProperStrand	4	chr14	76247810	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	3	-19.6872
chr13	73953669	73953716	protein_coding	Slc12a7	utr3	ENSMUSG00000017756	ProperStrand	80	chr10	74780667	74780685	protein_coding	Adora2a	intron	ENSMUSG00000020178	ProperStrand	4	1	-18.1772
chr5	143648750	143650352	protein_coding	Fbxl18	exon	ENSMUSG00000066640	ProperStrand	64	chr12	106269353	106269445	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-4.0185
chr8	106942360	106942376	protein_coding	Dync1li2	utr3	ENSMUSG00000035770	ProperStrand	75	chr4	152856778	152856794	protein_coding	Ajap1	utr5	ENSMUSG00000039546	ProperStrand	51	1	-13.1948
chr12	17552948	17553056	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr14	52829457	52829569	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	3	-2.7319
chr17	91177463	91177480	protein_coding	Nrxn1	intron	ENSMUSG00000024109	NonProperStrand	22	chr13	49820027	49820094	protein_coding	Iars	exon	ENSMUSG00000037851	ProperStrand	95	1	-14.4272
chr2	129998672	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr4	48598893	48598910	protein_coding	Tmeff1	intron	ENSMUSG00000028347	ProperStrand	47	1	-8.5989
chr3	103573326	103573412	protein_coding	Hipk1	exon	ENSMUSG00000008730	ProperStrand	23	chr17	35089181	35089233	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	5	-18.8024
chr1	162965531	162965588	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr16	18240830	18240920	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	4	-2.2543
chr11	77994800	77994832	snoRNA	ENSMUSG00000064540_Snord42a	.	ENSMUSG00000064540	ProperStrand	142	chr11	77995189	77995257	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-4.5098
chr12	87833919	87860981	protein_coding	Esrrb	utr3	ENSMUSG00000021255	ProperStrand	254	chr17	24857716	24857838	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	3	-1.6424
chr16	32675799	32678040	protein_coding	Tnk2	exon	ENSMUSG00000022791	ProperStrand	86	chr13	51743582	51743672	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	3	-14.1050
chr17	26230822	26230899	protein_coding	Nme4	exon	ENSMUSG00000024177	ProperStrand	9	chr10	23505152	23505221	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-11.3309
chr8	125628995	125629085	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	chr1	183853750	183853766	protein_coding	Enah	exon	ENSMUSG00000022995	NonProperStrand	33	2	-18.2611
chr8	85689747	85689763	protein_coding	Tbc1d9	utr5	ENSMUSG00000031709	ProperStrand	66	chr9	78326479	78326524	protein_coding	Eef1a1	utr3	ENSMUSG00000037742	ProperStrand	1990	1	-6.1462
chr9	104976166	104977500	protein_coding	Mrpl3	exon	ENSMUSG00000032563	ProperStrand	13	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-11.2885
chr1	155287329	155287354	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	chr1	194571819	194571880	snRNA	ENSMUSG00000064881_U5	.	ENSMUSG00000064881	ProperStrand	187	4	-20.1233
chr15	77597977	77597993	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr19	8989058	8989208	protein_coding	Ganab	exon	ENSMUSG00000071650	ProperStrand	145	1	-7.0497
chr1	71678633	71678709	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr8	98269959	98270009	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-0.8729
chr8	26673136	26673177	protein_coding	Fgfr1	intron	ENSMUSG00000031565	ProperStrand	10	chr6	115757994	115758083	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-9.0913
chr16	32615412	32616877	protein_coding	Tfrc	exon	ENSMUSG00000022797	ProperStrand	71	chr2	3201677	3222101	protein_coding	Nmt2	exon	ENSMUSG00000026643	ProperStrand	21	1	-15.0938
chr4	131908363	131908465	lincRNA	Gm17300	exon	ENSMUSG00000091021	ProperStrand	109	chr11	5330126	5330146	protein_coding	Znrf3	intron	ENSMUSG00000041961	ProperStrand	63	1	-12.0165
chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	chr1	162968442	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-0.7011
chr11	99885311	99885327	protein_coding	Krt33b	exon	ENSMUSG00000057723	NonProperStrand	352	chr11	62416575	62416653	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-3.5489
chr6	83293423	83293446	protein_coding	Mob1a	utr3	ENSMUSG00000043131	ProperStrand	7	chr15	98350211	98350283	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-9.1140
chr17	23947006	23947416	protein_coding	Srrm2	utr5	ENSMUSG00000039218	ProperStrand	521	chr3	19528533	19528550	protein_coding	1700064H15Rik	exon	ENSMUSG00000082766	NonProperStrand	78	1	-8.4614
chr2	91613185	91613203	protein_coding	Ambra1	exon	ENSMUSG00000040506	ProperStrand	65	chr11	87240282	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	1	-10.8295
chr4	129295130	129295780	protein_coding	Iqcc	exon	ENSMUSG00000040795	ProperStrand	4	chr7	149170855	149171340	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	1	-16.9785
chr6	54379743	54379760	lincRNA	9130019P16Rik	exon	ENSMUSG00000073067	ProperStrand	255	chr16	31948163	31948214	pseudogene	0610012G03Rik	.	ENSMUSG00000047112	ProperStrand	1	1	-inf
chr13	107737212	107737228	protein_coding	Dimt1	utr5	ENSMUSG00000021692	ProperStrand	185	chr2	132137379	132137445	protein_coding	Cds2	utr3	ENSMUSG00000058793	ProperStrand	47	1	-11.5472
chr17	46384747	46384931	protein_coding	Polr1c	utr5	ENSMUSG00000067148	ProperStrand	58	chr12	106269284	106269374	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-4.2045
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr16	23110456	23110584	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	5	-1.3062
chr11	104028025	104028043	protein_coding	Crhr1	intron	ENSMUSG00000018634	NonProperStrand	3	chr8	113362443	113362512	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	2	-21.6228
chr12	8799004	8799104	protein_coding	Sdc1	utr3	ENSMUSG00000020592	ProperStrand	15	chr8	125626945	125626982	snoRNA	ENSMUSG00000064450_Snord68	.	ENSMUSG00000064450	ProperStrand	181	1	-13.9225
chr4	140268528	140268549	protein_coding	Rcc2	exon	ENSMUSG00000040945	ProperStrand	228	chr10	107800719	107800823	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	2	-8.8893
chr12	100090820	100090910	protein_coding	Eml5	exon	ENSMUSG00000051166	ProperStrand	26	chr10	23505188	23505268	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.5465
chr5	140895759	140901241	protein_coding	Eif3b	exon	ENSMUSG00000056076	ProperStrand	66	chr7	116664872	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-6.3617
chr1	72898908	72898986	protein_coding	Igfbp2	utr3	ENSMUSG00000039323	ProperStrand	406	chr2	166888994	166889056	snoRNA	ENSMUSG00000077515_SNORD12	.	ENSMUSG00000077515	ProperStrand	191	1	-7.1746
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr3	144748059	144749264	protein_coding	Clca5	exon	ENSMUSG00000036960	ProperStrand	86	1	-7.8735
chr19	40988086	40988178	protein_coding	Zfp518a	exon	ENSMUSG00000049164	ProperStrand	9	chr16	23110459	23110526	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-6.0870
chr8	23671582	23671682	protein_coding	Slc20a2	exon	ENSMUSG00000037656	ProperStrand	63	chr4	131908688	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.1581
chrX	140773001	140773091	protein_coding	Alg13	intron	ENSMUSG00000041718	ProperStrand	45	chr8	32260341	32260421	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-5.1866
chr19	8799832	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	chr2	144091716	144091816	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	ProperStrand	549	1	-1.1471
chr8	97374230	97374247	protein_coding	Coq9	intron	ENSMUSG00000031782	NonProperStrand	11	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-8.6121
chr11	48619084	48619488	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	chr7	4982766	4982856	protein_coding	Zfp865	exon	ENSMUSG00000074405	ProperStrand	15	2	-inf
chr19	8799834	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	chr5	23358028	23358058	snoRNA	ENSMUSG00000093321_Snord93	.	ENSMUSG00000093321	ProperStrand	218	1	-2.5688
chr11	115854633	115854723	protein_coding	Itgb4	exon	ENSMUSG00000020758	ProperStrand	8	chr16	23111750	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.6662
chr5	135637598	135637650	protein_coding	Tbl2	utr3	ENSMUSG00000005374	ProperStrand	28	chr10	80809668	80809684	protein_coding	Hmg20b	exon	ENSMUSG00000020232	ProperStrand	157	1	-12.9255
chr2	83693562	83693578	protein_coding	Fam171b	exon	ENSMUSG00000048388	NonProperStrand	175	chr6	86475972	86476012	protein_coding	Pcbp1	utr5	ENSMUSG00000051695	ProperStrand	108	1	-9.9855
chr2	165681613	165681678	protein_coding	Zmynd8	intron	ENSMUSG00000039671	ProperStrand	81	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-3.0462
chr15	98349861	98349908	protein_coding	2310037I24Rik	exon	ENSMUSG00000022992	ProperStrand	91	chr18	75160708	75160776	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	1	-8.3540
chr9	15130725	15130796	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	chr19	8798484	8798553	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	3	-4.5250
chr9	65537318	65537418	pseudogene	Oaz2	.	ENSMUSG00000040652	ProperStrand	3	chr7	148634801	148634837	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-10.2358
chr3	129257216	129257274	protein_coding	Elovl6	intron	ENSMUSG00000041220	ProperStrand	59	chr4	131865856	131865946	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.7940
chr9	55969563	55969581	protein_coding	Pstpip1	intron	ENSMUSG00000032322	ProperStrand	8	chr3	68889027	68889127	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-7.2271
chr10	21555501	21555517	lincRNA	Gm6846	intron	ENSMUSG00000085422	ProperStrand	43	chr15	36532669	36532723	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	1	-8.5505
chr15	99537800	99537838	protein_coding	Smarcd1	exon	ENSMUSG00000023018	ProperStrand	43	chr11	69483136	69483185	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.0333
chr16	21475392	21477619	protein_coding	Vps8	exon	ENSMUSG00000033653	ProperStrand	27	chr7	52381975	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-8.3114
chr2	80235438	80236367	antisense	Gm13752	.	ENSMUSG00000085921	ProperStrand	2	chr14	103482686	103488550	protein_coding	Fbxl3	exon	ENSMUSG00000022124	ProperStrand	21	2	-inf
chr8	37936674	37936764	protein_coding	Dlc1	intron	ENSMUSG00000031523	ProperStrand	89	chr8	24137601	24137681	protein_coding	Ank1	intron	ENSMUSG00000031543	NonProperStrand	7	1	-17.0061
chr4	122970486	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	chr6	124665399	124665489	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	2	-2.8604
chr5	152343217	152343237	LTR	RLTR15	ERVK	chr5RLTR15152343062	NonProperStrand	1	chr18	35716835	35716874	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-inf
chr6	81833990	81834080	LTR	RMER12B	ERVK	chr6RMER12B81833875	ProperStrand	1	chr6	81834253	81834333	LTR	RMER12B	ERVK	chr6RMER12B81834171	ProperStrand	1	1	-inf
chr7	140955175	140955198	protein_coding	Dhx32	intron	ENSMUSG00000030986	ProperStrand	100	chr11	79518196	79518225	tRNA	tRNA550-ThrCGT	.	1489767	ProperStrand	21	1	-14.4198
chr7	26057525	26057542	protein_coding	Cic	exon	ENSMUSG00000005442	ProperStrand	80	chr15	34370591	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	3	-7.7119
chr15	83209504	83209594	protein_coding	Pacsin2	exon	ENSMUSG00000016664	ProperStrand	30	chr9	15118323	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-4.7797
chr11	49027439	49027539	protein_coding-noncoding	Zfp62	utr5	ENSMUSG00000046311	ProperStrand	5	chr16	23110966	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-inf
chr7	26528012	26530159	protein_coding	Hnrnpul1	exon	ENSMUSG00000040725	ProperStrand	84	chr2	26494708	26494759	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.5159
chr6	124864461	124864672	protein_coding	Ptms	exon	ENSMUSG00000030122	ProperStrand	21	chr4	131908236	131908276	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.1622
chr11	54683041	54683101	protein_coding	Hint1	intron	ENSMUSG00000020267	ProperStrand	11	chr13	60884834	60885331	protein_coding	BC051665	exon	ENSMUSG00000042243	ProperStrand	3	3	-inf
chr4	149945495	149945585	protein_coding	Rere	intron	ENSMUSG00000039852	NonProperStrand	12	chr6	85878904	85878984	protein_coding	Tprkb	utr3	ENSMUSG00000054226	NonProperStrand	3	1	-inf
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr2	180324254	180324285	protein_coding	Ogfr	exon	ENSMUSG00000049401	ProperStrand	8	1	-12.9267
chr17	53623235	53623252	protein_coding	Rab5a	utr5	ENSMUSG00000017831	ProperStrand	44	chr4	131908363	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.8887
chr8	32311405	32311495	protein_coding	Fut10	intron	ENSMUSG00000046152	ProperStrand	3	chr18	35716764	35716844	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-8.1910
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	32221007	32221023	pseudogene	Pdxk-ps	.	ENSMUSG00000002791	ProperStrand	6	1	-9.1372
chr16	90225440	90226427	protein_coding	Sod1	exon	ENSMUSG00000022982	ProperStrand	75	chr2	26493366	26493391	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	12	-inf
chr7	52780218	52780293	protein_coding	Ppp1r15a	exon	ENSMUSG00000040435	ProperStrand	9	chr1	162967536	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-7.2161
chr2	143803478	143803551	protein_coding	Rrbp1	intron	ENSMUSG00000027422	ProperStrand	76	chr1	138122170	138122187	protein_coding	5730559C18Rik	intron	ENSMUSG00000041605	NonProperStrand	22	1	-14.8741
chr4	6381259	6381386	protein_coding	Nsmaf	utr5	ENSMUSG00000028245	ProperStrand	15	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-9.7267
chr1	187231059	187231371	protein_coding	Eprs	exon	ENSMUSG00000026615	ProperStrand	149	chr4	56901406	56901475	protein_coding	D730040F13Rik	exon	ENSMUSG00000055296	ProperStrand	48	1	-11.9377
chr18	77789992	77790059	protein_coding	Rnf165	intron	ENSMUSG00000025427	ProperStrand	15	chr11	62416605	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-7.9356
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr7	134731424	134731440	protein_coding	Gm166	exon	ENSMUSG00000057176	ProperStrand	22	1	-10.7444
chr18	24770464	24770554	protein_coding	Elp2	exon	ENSMUSG00000024271	ProperStrand	46	chr18	35714149	35714229	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-3.9369
chr4	67684238	67684255	lincRNA	Gm11751	intron	ENSMUSG00000086364	NonProperStrand	11	chr11	120429259	120429298	protein_coding	P4hb	exon	ENSMUSG00000025130	ProperStrand	83	1	-16.1403
chr19	7289819	7289867	protein_coding	Cox8a	utr3	ENSMUSG00000035885	ProperStrand	32	chr9	122170515	122170532	protein_coding	Ano10	exon	ENSMUSG00000037949	ProperStrand	16	2	-inf
chr16	44227371	44227387	protein_coding	Gm608	utr3	ENSMUSG00000068284	ProperStrand	17	chr9	15119668	15119712	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.9895
chr7	13516142	13516209	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr17	24857721	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	20	-15.0883
chr12	60575476	60575494	LINE	L1_Mus4	L1	chr12L1_Mus460575423	ProperStrand	33	chr2	167836657	167836679	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	1	-13.3390
chr11	100454230	100457512	protein_coding	Dnajc7	exon	ENSMUSG00000014195	ProperStrand	49	chr2	153226013	153226030	protein_coding	Asxl1	exon	ENSMUSG00000042548	NonProperStrand	13	1	-16.8515
chr2	105234867	105234888	protein_coding	Rcn1	exon	ENSMUSG00000005973	ProperStrand	24	chr9	96218296	96218396	protein_coding	Tfdp2	utr3	ENSMUSG00000032411	ProperStrand	95	1	-14.2461
chr8	86249778	86255047	protein_coding	Cd97	exon	ENSMUSG00000002885	ProperStrand	37	chr16	23110902	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-5.5936
chr19	29703216	29703285	protein_coding	Ermp1	exon	ENSMUSG00000046324	ProperStrand	103	chr17	27110157	27110173	protein_coding	Zbtb9	utr5	ENSMUSG00000079605	ProperStrand	16	1	-14.9207
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr9	58547119	58547136	protein_coding	2410076I21Rik	intron	ENSMUSG00000074269	ProperStrand	91	1	-5.0909
chr17	35035725	35035825	protein_coding	Ehmt2	intron	ENSMUSG00000013787	ProperStrand	42	chr4	131908356	131908417	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-3.5738
chr11	55208662	55208693	protein_coding	Sparc	utr3	ENSMUSG00000018593	ProperStrand	48	chr4	131866241	131866285	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-6.8596
chr1	121974044	121974103	SINE	B4	B4	chr1B4121973961	NonProperStrand	4	chr18	35714187	35714277	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	4	-inf
chr7	127775284	127775330	LINE	L1_Mur3	L1	chr7L1_Mur3127774453	NonProperStrand	2	chr18	73693110	73693139	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-12.9450
chr5	66198471	66198571	protein_coding	N4bp2	exon	ENSMUSG00000037795	ProperStrand	30	chr18	35102297	35102365	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	2	-12.7613
chr11	120819170	120819267	protein_coding	Slc16a3	exon	ENSMUSG00000025161	ProperStrand	98	chr11	101269540	101269569	protein_coding	Aarsd1	intron	ENSMUSG00000075528	ProperStrand	30	1	-13.7313
chr11	120439781	120439859	protein_coding	Arhgdia	utr3	ENSMUSG00000025132	ProperStrand	39	chr15	79908931	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-6.3212
chr8	3185148	3189137	protein_coding	Insr	exon	ENSMUSG00000005534	NonProperStrand	7	chr11	6428060	6428156	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-17.4132
chr15	99256421	99256437	protein_coding	Nckap5l	exon	ENSMUSG00000023009	ProperStrand	51	chr2	22444823	22444857	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-8.1016
chr7	108029588	108029604	protein_coding	Arhgef17	intron	ENSMUSG00000032875	NonProperStrand	8	chr1	102101022	102101040	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	ProperStrand	5	1	-18.8889
chr6	142439080	142439096	protein_coding	Ldhb	exon	ENSMUSG00000030246	NonProperStrand	63	chr6	143116075	143116129	protein_coding	Etnk1	exon	ENSMUSG00000030275	ProperStrand	61	1	-13.1816
chr8	90848703	90848719	protein_coding	Adcy7	exon	ENSMUSG00000031659	ProperStrand	19	chr3	121129609	121129652	protein_coding	Cnn3	utr5	ENSMUSG00000053931	ProperStrand	77	1	-15.1503
chr14	100983006	100983096	LTR	MLT1C	MaLR	chr14MLT1C100983001	ProperStrand	1	chr14	100982856	100982946	LTR	ORR1A2	MaLR	chr14ORR1A2100982672	ProperStrand	1	1	-inf
chr9	78326468	78328375	protein_coding	Eef1a1	utr3	ENSMUSG00000037742	ProperStrand	1990	chr1	162968458	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	3	-1.5912
chr2	90235307	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	25300469	25300485	protein_coding	Zfp428	exon	ENSMUSG00000064264	ProperStrand	23	1	-6.3423
chr13	56962398	56962414	protein_coding	Trpc7	exon	ENSMUSG00000021541	ProperStrand	50	chr9	64143768	64143868	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-8.1371
chr2	172825857	172825877	protein_coding	Rae1	utr5	ENSMUSG00000027509	NonProperStrand	44	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	4	-12.4445
chr5	141040472	141040645	protein_coding	Grifin	exon	ENSMUSG00000036586	ProperStrand	1	chr16	23110832	23110873	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr8	27251411	27251431	protein_coding	Rnf170	exon	ENSMUSG00000013878	ProperStrand	8	chr14	56167380	56167475	protein_coding	Pck2	exon	ENSMUSG00000040618	ProperStrand	18	2	-18.9683
chr14	78922421	78936520	protein_coding	Akap11	utr5	ENSMUSG00000022016	ProperStrand	44	chr8	129468788	129468868	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-5.0111
chr13	44964997	44965034	protein_coding	Jarid2	intron	ENSMUSG00000038518	ProperStrand	372	chr13	51743658	51743703	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	NonProperStrand	5	1	-14.8169
chr16	89793261	89793278	protein_coding	Tiam1	exon	ENSMUSG00000002489	ProperStrand	80	chr11	62416599	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-4.6113
chr5	143665041	143667265	protein_coding	Actb	exon	ENSMUSG00000029580	ProperStrand	446	chr11	69483136	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	7	-3.4501
chr9	48850129	48850227	protein_coding	Usp28	utr3	ENSMUSG00000032267	ProperStrand	63	chr18	35102297	35102342	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	2	-10.5029
chr19	8799425	8799451	lincRNA	Snhg1	exon	ENSMUSG00000090867	ProperStrand	100	chr18	35714144	35714220	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	3	-6.6606
chr2	17798970	17798991	LTR	RMER17C-int	ERVK	chr2RMER17C-int17798670	NonProperStrand	5	chr16	23110852	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-inf
chr6	125120983	125129780	protein_coding	Ncapd2	exon	ENSMUSG00000038252	ProperStrand	170	chr16	23110829	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	8	-1.3257
chr5	92414575	92414594	pseudogene	Gm15710	.	ENSMUSG00000084111	ProperStrand	28	chr9	120037994	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-6.1996
chr11	84634790	84634907	protein_coding	Dhrs11	exon	ENSMUSG00000034449	ProperStrand	12	chr3	108357320	108357415	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	3	-17.6440
chr5	77086888	77086904	protein_coding	Gm10430	exon	ENSMUSG00000072855	ProperStrand	11	chr11	6519908	6519944	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-11.3993
chr9	56008638	56008711	protein_coding	Tspan3	utr5	ENSMUSG00000032324	ProperStrand	10	chr12	82317769	82317785	protein_coding	Slc8a3	exon	ENSMUSG00000079055	ProperStrand	126	1	-15.4894
chr10	126997049	126997095	protein_coding	Lrp1	exon	ENSMUSG00000040249	ProperStrand	151	chr2	26493383	26493483	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	8	-18.3102
chr1	12789464	12789544	protein_coding	Sulf1	intron	ENSMUSG00000016918	NonProperStrand	3	chr4	56885975	56886065	protein_coding	D730040F13Rik	utr3	ENSMUSG00000055296	ProperStrand	48	1	-19.6041
chr3	38291725	38291743	SINE	B3A	B2	chr3B3A38291647	NonProperStrand	2	chrX	141318063	141318080	protein_coding	Zcchc16	intron	ENSMUSG00000071679	ProperStrand	7	1	-inf
chr4	135416423	135416448	protein_coding	Srsf10	intron	ENSMUSG00000028676	ProperStrand	31	chr13	12682029	12682065	protein_coding	Ero1lb	intron	ENSMUSG00000057069	ProperStrand	15	2	-19.7161
chr6	21923930	21924011	protein_coding	Ing3	utr3	ENSMUSG00000029670	ProperStrand	6	chr17	24665467	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-9.6364
chr10	23505250	23505287	protein_coding	Rps12	intron	ENSMUSG00000061983	ProperStrand	309	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-2.7870
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr10	126932146	126934220	protein_coding	R3hdm2	exon	ENSMUSG00000025404	ProperStrand	33	1	-8.9961
chr5	122952097	122952113	protein_coding	Atp2a2	utr5	ENSMUSG00000029467	NonProperStrand	9	chr9	64022855	64022875	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-11.9052
chr12	87847321	87847408	protein_coding	Esrrb	exon	ENSMUSG00000021255	ProperStrand	254	chr19	8798740	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-2.1848
chr14	51427116	51427359	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr3	108357255	108357468	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	3	-0.8717
chr11	103106532	103106549	protein_coding	Map3k14	intron	ENSMUSG00000020941	ProperStrand	3	chr10	80574656	80574729	protein_coding	Map2k2	intron	ENSMUSG00000035027	ProperStrand	26	1	-20.0435
chr8	125627150	125627250	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	chr8	73419657	73419679	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-1.0084
chrX	164228615	164228631	protein_coding	Frmpd4	intron	ENSMUSG00000049176	ProperStrand	12	chr16	23111453	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.0123
chr14	123905871	123905890	protein_coding	Nalcn	intron	ENSMUSG00000000197	NonProperStrand	12	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-11.4554
chrX	71558431	71558450	protein_coding	Fam50a	utr5	ENSMUSG00000001962	ProperStrand	4	chr18	75161124	75161173	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	1	-14.6900
chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	chr17	24665420	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	2	-3.9007
chr7	147971430	147971520	protein_coding	Syce1	intron	ENSMUSG00000025480	ProperStrand	1	chr9	120038554	120038634	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-inf
chr4	131908260	131908897	lincRNA	Gm17300	exon	ENSMUSG00000091021	ProperStrand	109	chr16	57391604	57391789	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	10	-19.2660
chr11	121083909	121083950	protein_coding	BC017643	utr3	ENSMUSG00000039294	ProperStrand	16	chr10	23505149	23505211	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.4264
chr10	30764578	30764668	SINE	B3A	B2	chr10B3A30764513	NonProperStrand	1	chr1	127780252	127780332	protein_coding	Lypd1	intron	ENSMUSG00000026344	ProperStrand	4	1	-inf
chr5	36818162	36818262	protein_coding	Tada2b	utr3	ENSMUSG00000029196	ProperStrand	1	chr18	35102297	35102362	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-inf
chr17	32453268	32453284	protein_coding	Akap8	exon	ENSMUSG00000024045	ProperStrand	339	chr18	74938207	74938313	snoRNA	ENSMUSG00000089235_SCARNA17	.	ENSMUSG00000089235	ProperStrand	1128	2	-6.8329
chr1	141320013	141320113	protein_coding	Zbtb41	exon	ENSMUSG00000033964	ProperStrand	3	chr10	23505148	23505214	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-6.9610
chr15	96405422	96405467	protein_coding	Slc38a1	utr3	ENSMUSG00000023169	ProperStrand	69	chr8	24020620	24020636	protein_coding	Myst3	exon	ENSMUSG00000031540	ProperStrand	111	1	-11.7967
chr5	125008052	125008069	protein_coding	Ddx55	exon	ENSMUSG00000029389	ProperStrand	8	chr7	29136525	29136593	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-6.2203
chrX	103170686	103170776	protein_coding	Magt1	intron	ENSMUSG00000031232	ProperStrand	12	chr7	116663634	116663714	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-5.5543
chr19	9067955	9067991	protein_coding	Ahnak	intron	ENSMUSG00000069833	ProperStrand	103	chr10	110918549	110918639	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	6	-14.3063
chr17	46702168	46711348	protein_coding	Ptk7	exon	ENSMUSG00000023972	ProperStrand	101	chr4	131908236	131908351	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	8	-10.3358
chr11	77996560	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	chr9	64143735	64143825	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	5	-6.9107
chr6	115757992	115758010	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr7	134671388	134671504	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-0.8539
chr8	87223593	87223610	protein_coding	Trmt1	exon	ENSMUSG00000001909	NonProperStrand	60	chr12	112779228	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	2	-7.9074
chr1	93342189	93345290	protein_coding	Per2	exon	ENSMUSG00000055866	ProperStrand	114	chr12	92811957	92812014	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	1	-7.2913
chr1	10022086	10022141	protein_coding-noncoding	Cops5	utr3	ENSMUSG00000025917	ProperStrand	1	chr19	8963087	8963187	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-inf
chr4	46128019	46128109	protein_coding	Tmod1	utr3	ENSMUSG00000028328	ProperStrand	6	chr9	64504217	64504307	protein_coding	Megf11	intron	ENSMUSG00000036466	ProperStrand	15	1	-19.6211
chr17	27771416	27772181	protein_coding	Rps10	utr5	ENSMUSG00000052146	ProperStrand	94	chr18	35716806	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.4710
chr11	96775109	96777487	protein_coding	Cdk5rap3	exon	ENSMUSG00000018669	ProperStrand	16	chr18	35716828	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.5854
mmu-miR-6240	2	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr17	35822058	35822258	protein_coding	Ddr1	exon	ENSMUSG00000003534	ProperStrand	129	1	-4.4216
chr16	18556581	18556632	protein_coding	Gnb1l	intron	ENSMUSG00000000884	ProperStrand	25	chr17	13112532	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-6.2962
chr8	96556307	96556371	protein_coding	Nudt21	exon	ENSMUSG00000031754	ProperStrand	33	chr5	142459852	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	2	-18.1086
chr2	90235315	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	75281743	75281760	protein_coding	Tlcd2	exon	ENSMUSG00000038217	ProperStrand	23	1	-6.3423
chr6	119194081	119194098	protein_coding	Cacna2d4	intron	ENSMUSG00000041460	NonProperStrand	4	chr11	6428035	6428102	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-8.6824
chrX	71026351	71026534	protein_coding	Idh3g	exon	ENSMUSG00000002010	ProperStrand	10	chr19	8800352	8800442	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-7.0560
chr10	107448926	107448946	LINE	L1_Mus2	L1	chr10L1_Mus2107448767	ProperStrand	5	chr18	35403632	35403698	protein_coding	Ctnna1	exon	ENSMUSG00000037815	ProperStrand	115	1	-17.0796
chr4	81711856	81711872	lincRNA	Gm5860	exon	ENSMUSG00000085022	NonProperStrand	1	chr11	6428035	6428157	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-inf
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr19	8963026	8963187	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	6	-0.7125
chr13	109387491	110640488	protein_coding	Pde4d	intron	ENSMUSG00000021699	ProperStrand	92	chr5	108334195	108334255	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	3	-9.7402
chr1	38174683	38174766	protein_coding	Rev1	intron	ENSMUSG00000026082	ProperStrand	48	chr2	32040869	32040886	protein_coding	Prrc2b	exon	ENSMUSG00000039262	ProperStrand	344	1	-10.2635
chr19	42044219	42055527	protein_coding	Mms19	exon	ENSMUSG00000025159	ProperStrand	52	chr19	8963027	8963111	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	6	-14.5854
chr8	26933273	26933317	protein_coding	Ash2l	exon	ENSMUSG00000031575	ProperStrand	113	chr7	117189957	117189995	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	4	-8.2387
chr14	20583098	20618016	protein_coding	Nid2	exon	ENSMUSG00000021806	ProperStrand	372	chr3	123210854	123210958	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	5	-1.6783
chr17	75012834	75012903	protein_coding	Birc6	exon	ENSMUSG00000024073	ProperStrand	110	chr14	47808947	47808963	protein_coding	Gch1	utr5	ENSMUSG00000037580	NonProperStrand	31	1	-13.4306
chr15	77606345	77607362	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr17	35796786	35796951	protein_coding	Vars2	exon	ENSMUSG00000038838	ProperStrand	19	4	-21.4834
chr16	43886901	43886983	protein_coding	Qtrtd1	intron	ENSMUSG00000022704	ProperStrand	11	chr19	8963027	8963080	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.4574
chr10	126745696	126746011	protein_coding	Mars	exon	ENSMUSG00000040354	ProperStrand	38	chr18	33954850	33954940	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-4.3641
chr2	11060152	11060168	LINE	Lx5	L1	chr2Lx511058457	ProperStrand	1	chr7	52713415	52713483	protein_coding	Ftl1	utr3	ENSMUSG00000050708	ProperStrand	807	1	-inf
chr10	12341172	12353752	protein_coding	Utrn	exon	ENSMUSG00000019820	ProperStrand	69	chr2	144087380	144087463	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-6.2692
chr8	126026860	126026938	protein_coding	Afg3l1	utr3	ENSMUSG00000031967	ProperStrand	29	chr11	97642972	97643062	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.7822
chr9	30904657	30904675	protein_coding	St14	exon	ENSMUSG00000031995	ProperStrand	90	chr4	140551528	140552218	protein_coding	Atp13a2	exon	ENSMUSG00000036622	ProperStrand	39	1	-13.3664
chr18	63908609	63908625	protein_coding	Wdr7	intron	ENSMUSG00000040560	NonProperStrand	180	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-3.7616
chrX	67458741	67458757	LINE	Lx8	L1	chrXLx867458264	NonProperStrand	35	chr4	131908827	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.0337
chr3	68299374	68299426	protein_coding	Schip1	intron	ENSMUSG00000027777	ProperStrand	70	chr8	74000451	74000468	protein_coding	Ano8	exon	ENSMUSG00000034863	NonProperStrand	171	1	-10.9018
chr2	105012751	105012769	protein_coding	Wt1	utr3	ENSMUSG00000016458	NonProperStrand	338	chr4	40684322	40684365	protein_coding	Smu1	utr3	ENSMUSG00000028409	ProperStrand	23	1	-11.7905
chr3	19957903	19957920	protein_coding	Hltf	utr5	ENSMUSG00000002428	ProperStrand	24	chr11	6519881	6519931	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-9.7902
chr8	113038132	113081861	protein_coding	Hydin	exon	ENSMUSG00000059854	ProperStrand	47	chr16	23110857	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-5.8365
chr10	90628745	90633803	protein_coding	Tmpo	exon	ENSMUSG00000019961	ProperStrand	57	chr16	23110494	23110574	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.5495
chr7	19661725	19661741	protein_coding	Dmwd	exon	ENSMUSG00000030410	ProperStrand	41	chr19	8963026	8963057	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.9336
chr12	101546398	101546415	protein_coding	Ttc7b	intron	ENSMUSG00000033530	NonProperStrand	15	chr1	162965980	162965999	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-6.3018
chr2	4974190	4974207	protein_coding	Optn	exon	ENSMUSG00000026672	ProperStrand	451	chr11	77996562	77996609	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-2.3369
chr3	142351261	142351279	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr3	95980328	95980410	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-1.7675
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr11	6428076	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	4	-1.0484
chr17	12933269	12941543	protein_coding	Igf2r	exon	ENSMUSG00000023830	ProperStrand	151	chr16	23111705	23111795	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-2.3570
chr11	113588690	113588764	protein_coding	Cdc42ep4	utr3	ENSMUSG00000041598	ProperStrand	56	chr16	23111474	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-5.8002
chr4	120647985	120648018	protein_coding	Smap2	exon	ENSMUSG00000032870	ProperStrand	13	chr10	99939356	99939380	protein_coding	Tmtc3	exon	ENSMUSG00000036676	ProperStrand	53	1	-16.6914
chr9	108586384	108586430	protein_coding	Slc25a20	utr3	ENSMUSG00000032602	ProperStrand	5	chr16	23110965	23111010	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr11	115999916	115999932	protein_coding	Mrpl38	exon	ENSMUSG00000020775	NonProperStrand	65	chr11	34712562	34712592	snRNA	ENSMUSG00000064577_U6	.	ENSMUSG00000064577	ProperStrand	1	1	-inf
chr12	56810537	56810637	protein_coding	Ralgapa1	exon	ENSMUSG00000021027	ProperStrand	9	chr7	29136575	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.9747
chr5	140212129	140212146	protein_coding	Micall2	utr5	ENSMUSG00000036718	NonProperStrand	18	chr17	35089181	35089233	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-7.8895
chr16	31961020	31961071	protein_coding	Ncbp2	intron	ENSMUSG00000022774	NonProperStrand	28	chr10	80644035	80644135	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	19	-19.8249
chr13	76726927	76726945	protein_coding	Mctp1	intron	ENSMUSG00000021596	NonProperStrand	13	chr19	8971540	8971640	protein_coding	Ints5	exon	ENSMUSG00000071652	ProperStrand	6	1	-19.5123
chr12	86567060	86567150	protein_coding	Eif2b2	utr3	ENSMUSG00000004788	ProperStrand	15	chr4	131908708	131908788	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.5353
chr5	115848210	115848227	antisense	Gm13832	.	ENSMUSG00000087292	ProperStrand	47	chr11	106874216	106874254	tRNA	tRNA945-ArgCCG	.	1801474	ProperStrand	133	1	-12.2083
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr11	97223974	97223990	protein_coding	Socs7	exon	ENSMUSG00000038485	ProperStrand	12	1	-11.9952
chr4	44045386	44045444	protein_coding	Clta	exon	ENSMUSG00000028478	ProperStrand	59	chr7	134986031	134986048	protein_coding	Stx4a	exon	ENSMUSG00000030805	NonProperStrand	11	1	-16.7218
chr12	71347267	71347283	protein_coding	Trim9	utr3	ENSMUSG00000021071	NonProperStrand	75	chr10	23505261	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-0.9446
chr1	162967512	162967564	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	chr12	110874223	110874291	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	7	-8.9834
chr10	39594125	39594159	protein_coding	Rev3l	utr3	ENSMUSG00000019841	ProperStrand	39	chr14	33005093	33005137	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-4.8166
chr2	150021507	150021559	LINE	Lx2B	L1	chr2Lx2B150020915	ProperStrand	1	chr17	56806069	56806087	LTR	ORR1D1	MaLR	chr17ORR1D156806058	NonProperStrand	1	1	-inf
chr2	158205369	158205405	snoRNA	ENSMUSG00000064585_SNORA71	.	ENSMUSG00000064585	ProperStrand	418	chr6	125071780	125071880	snoRNA	ENSMUSG00000088208_SCARNA11	.	ENSMUSG00000088208	ProperStrand	113	1	-8.1594
chr18	10052132	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr7	150646298	150646316	protein_coding	Cdkn1c	exon	ENSMUSG00000037664	NonProperStrand	9	1	-12.6845
chr12	109427366	109427404	protein_coding	Ccnk	exon	ENSMUSG00000021258	ProperStrand	31	chr11	97641480	97641587	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	13	-18.7579
chr13	96374713	96374729	protein_coding	F2r	exon	ENSMUSG00000048376	NonProperStrand	88	chr2	145076805	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-6.9614
chr16	46421892	46421965	protein_coding	Pvrl3	intron	ENSMUSG00000022656	ProperStrand	11	chr17	24857817	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-9.1031
chr15	34069623	34070520	protein_coding	Mtdh	utr3	ENSMUSG00000022255	ProperStrand	37	chr1	162966819	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	4	-20.7722
chr2	25219640	25219692	protein_coding	Uap1l1	exon	ENSMUSG00000026956	ProperStrand	8	chr8	87083463	87083480	protein_coding	Cacna1a	exon	ENSMUSG00000034656	NonProperStrand	37	1	-18.0985
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr17	45706444	45707248	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	4	-2.8286
chr3	103718926	103719001	protein_coding	Rsbn1	exon	ENSMUSG00000044098	ProperStrand	32	chr3	135523711	135523728	protein_coding	Slc39a8	intron	ENSMUSG00000053897	NonProperStrand	19	1	-16.8581
chr2	127052114	127052214	protein_coding	Snrnp200	exon	ENSMUSG00000003660	ProperStrand	203	chr3	123210850	123210897	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-1.0598
chr4	143748332	143749010	protein_coding	Oog3	exon	ENSMUSG00000050810	NonProperStrand	78	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-11.1579
chr6	143429775	143429792	LINE	L1MA4	L1	chr6L1MA4143429728	ProperStrand	39	chr11	116938556	116938611	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-7.0144
chr9	55685987	55705907	protein_coding	Scaper	exon	ENSMUSG00000034007	ProperStrand	19	chr9	15119372	15119425	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	2	-11.9180
chr1	108289448	108289496	protein_coding	Phlpp1	exon	ENSMUSG00000044340	ProperStrand	67	chr2	26493391	26493491	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-6.0166
chr4	129804952	129805052	protein_coding	Pef1	utr3	ENSMUSG00000028779	ProperStrand	16	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-6.2934
chr7	80599215	80599275	protein_coding	Chd2	exon	ENSMUSG00000078671	ProperStrand	69	chr7	148634705	148634795	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-3.7247
chr17	4082442	4082532	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr3	124695929	124696019	LINE	L1Md_T	L1	chr3L1Md_T124695924	ProperStrand	1	1	-inf
chr1	84772931	84772982	protein_coding	Trip12	exon	ENSMUSG00000026219	ProperStrand	248	chr7	116663649	116663739	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-1.1723
chr4	41142149	41142249	protein_coding	Ubap2	utr3	ENSMUSG00000028433	ProperStrand	292	chr6	117874141	117874163	protein_coding	Hnrnpf	exon	ENSMUSG00000042079	ProperStrand	147	1	-8.3483
chr3	82932509	82932526	protein_coding	Gm10710	utr5	ENSMUSG00000074517	ProperStrand	2	chr4	131865855	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-8.7800
chr10	31447748	31447768	LINE	L1VL1	L1	chr10L1VL131447664	NonProperStrand	1	chr17	24857756	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-inf
chr11	33061198	33061581	protein_coding	Npm1	exon	ENSMUSG00000057113	ProperStrand	352	chr17	95160908	95218242	protein_coding	2610044O15Rik	exon	ENSMUSG00000066057	NonProperStrand	70	3	-19.3170
chr2	79132657	79132674	protein_coding-noncoding	Itga4	utr5	ENSMUSG00000027009	NonProperStrand	118	chr8	129468746	129468851	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-3.1573
chr17	85482653	85489599	protein_coding	Prepl	utr5	ENSMUSG00000024127	ProperStrand	106	chr2	129026014	129026037	protein_coding	Slc20a1	exon	ENSMUSG00000027397	ProperStrand	81	1	-11.5667
chr8	73419681	73419771	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	chr2	122201236	122201316	tRNA	tRNA1432-HisGTG	.	276303	ProperStrand	2	2	-inf
chr2	25463803	25463820	protein_coding	B230208H17Rik	utr5	ENSMUSG00000015087	ProperStrand	25	chr4	128867196	128867212	protein_coding	Yars	exon	ENSMUSG00000028811	ProperStrand	131	1	-13.5170
chr8	124103115	124103137	protein_coding	Gm20388	intron	ENSMUSG00000092329	NonProperStrand	203	chr12	110887828	110887894	snoRNA	ENSMUSG00000084549_SNORD113	.	ENSMUSG00000084549	ProperStrand	196	1	-8.4988
chr7	67129997	67130754	protein_coding	Snrpn	exon	ENSMUSG00000000948	ProperStrand	32	chr11	119942923	119943003	protein_coding	Azi1	intron	ENSMUSG00000039781	ProperStrand	24	1	-16.4313
chr12	3901579	3901653	protein_coding	Dnmt3a	exon	ENSMUSG00000020661	ProperStrand	40	chr19	8798488	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-6.0069
chr6	139441925	139441945	protein_coding	Rergl	exon	ENSMUSG00000092164	ProperStrand	1	chr6	115757992	115758110	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-inf
chr18	63238396	63238412	protein_coding	Fam38b	exon	ENSMUSG00000041482	NonProperStrand	50	chr19	8798745	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-5.1543
chr15	102291129	102292627	protein_coding	Prr13	exon	ENSMUSG00000023048	ProperStrand	13	chr3	19528533	19528550	protein_coding	1700064H15Rik	exon	ENSMUSG00000082766	NonProperStrand	78	1	-15.9055
chr4	43505726	43505826	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr5	67389993	67390010	protein_coding	Limch1	exon	ENSMUSG00000037736	ProperStrand	20	2	-8.5305
chr16	91623724	91624639	protein_coding	Gart	exon	ENSMUSG00000022962	ProperStrand	200	chr7	29136565	29136645	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	7	-7.8875
chr4	154448998	154449022	protein_coding	Rer1	utr3	ENSMUSG00000029048	ProperStrand	9	chr16	23110965	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.9939
chr13	68759738	68764669	protein_coding	Adcy2	exon	ENSMUSG00000021536	ProperStrand	237	chr11	62416577	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	3	-6.8234
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr7	28150643	28150660	protein_coding	Spnb4	exon	ENSMUSG00000011751	ProperStrand	39	1	-6.7566
chr6	125414445	125414469	protein_coding	Cd9	exon	ENSMUSG00000030342	ProperStrand	81	chr2	59681353	59681453	protein_coding	Tanc1	exon	ENSMUSG00000035168	ProperStrand	80	15	-19.7556
chr9	120038613	120038665	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	chr1	59761635	59761708	snoRNA	ENSMUSG00000089093_Snord11	.	ENSMUSG00000089093	ProperStrand	193	1	-1.1743
chr4	110425532	110425550	protein_coding	Agbl4	intron	ENSMUSG00000061298	NonProperStrand	33	chr16	23111707	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.9163
chr3	123210913	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	chr5	125884616	125884642	tRNA	tRNA1317-AlaTGC	.	147035	ProperStrand	149	1	-0.7912
chr12	87865704	87865722	SINE	RSINE1	B4	chr12RSINE187865630	ProperStrand	36	chr10	23505205	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.9992
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr14	117972310	117972326	protein_coding	Gpc6	intron	ENSMUSG00000058571	ProperStrand	28	1	-9.2727
chr9	120038466	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	chr7	148634701	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	40	-0.8973
chr16	5256015	5256031	protein_coding	Fam86	utr5	ENSMUSG00000022544	ProperStrand	231	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-2.6954
chr4	106873373	106873390	protein_coding	Tmem59	utr3	ENSMUSG00000028618	NonProperStrand	9	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-7.0004
chr3	54602099	54602115	protein_coding	Smad9	utr3	ENSMUSG00000027796	ProperStrand	24	chr9	15119663	15119710	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.3157
chr11	88861033	88878506	protein_coding	Trim25	utr3	ENSMUSG00000000275	ProperStrand	50	chr3	68889055	68889188	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	3	-8.9197
chr4	55544530	55544558	protein_coding	Klf4	exon	ENSMUSG00000003032	ProperStrand	64	chr19	6015649	6015666	protein_coding	Capn1	intron	ENSMUSG00000024942	ProperStrand	22	1	-15.2065
chr15	37932073	37934019	protein_coding	Ubr5	exon	ENSMUSG00000037487	ProperStrand	258	chr17	24857719	24857852	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	5	-3.5227
chr5	144268321	144275569	protein_coding	Rac1	exon	ENSMUSG00000001847	ProperStrand	32	chrX	20002887	20002903	protein_coding	Phf16	utr5	ENSMUSG00000037315	ProperStrand	22	1	-16.6073
chr6	113652537	113652637	protein_coding	Tatdn2	exon	ENSMUSG00000056952	ProperStrand	24	chr4	131908688	131908808	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	9	-20.1591
chr10	69654419	69654519	protein_coding	Ccdc6	utr3	ENSMUSG00000048701	ProperStrand	72	chr5	130300475	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.2024
chr19	45308496	45308513	protein_coding	Lbx1	exon	ENSMUSG00000025216	ProperStrand	23	chr4	131865917	131865987	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-11.7128
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	79845018	79845034	protein_coding	Mex3d	exon	ENSMUSG00000048696	ProperStrand	14	1	-7.3487
chr13	28653437	28700391	lincRNA	2610307P16Rik	exon	ENSMUSG00000085936	ProperStrand	154	chr6	87857880	87857936	protein_coding	Copg	exon	ENSMUSG00000030058	ProperStrand	68	1	-11.1698
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr4	122968648	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-1.9367
chr12	58691976	58691992	antisense	4921518K17Rik	.	ENSMUSG00000085851	ProperStrand	75	chr4	148307220	148307268	protein_coding	Casz1	exon	ENSMUSG00000028977	ProperStrand	27	1	-14.4828
chr9	50501605	50501647	protein_coding-noncoding	Dixdc1	utr3	ENSMUSG00000032064	ProperStrand	4	chr10	23505152	23505202	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-10.6986
chr5	100855902	100855935	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr1	88252959	88253157	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	1	-1.2817
chr4	56910538	56910618	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	chr3	88497889	88497979	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-0.9956
chr14	75730886	75730939	protein_coding	Zc3h13	exon	ENSMUSG00000022000	ProperStrand	42	chr18	73693120	73693149	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	2	-10.1120
chr16	11222741	11222805	protein_coding	Gspt1	exon	ENSMUSG00000062203	ProperStrand	49	chr16	23110466	23110556	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.8132
chr2	145577695	145577775	lincRNA	BC039771	exon	ENSMUSG00000087594	NonProperStrand	4	chr2	132392008	132392098	protein_coding	Gpcpd1	intron	ENSMUSG00000027346	ProperStrand	17	1	-24.9237
chr1	182096420	182096436	protein_coding	Adck3	utr3	ENSMUSG00000026489	ProperStrand	17	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.5881
chr2	38857277	38859652	protein_coding	Rpl35	exon	ENSMUSG00000062997	ProperStrand	68	chr2	32818835	32818935	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-5.2268
chr15	102300970	102301004	lincRNA	Gm17403	intron	ENSMUSG00000090630	NonProperStrand	10	chr10	110918635	110918670	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-6.9682
chr10	50383833	50383849	protein_coding	Ascc3	intron	ENSMUSG00000038774	ProperStrand	10	chr14	76247753	76247778	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-7.7404
chr19	4858635	4858726	protein_coding	Ctsf	intron	ENSMUSG00000083282	ProperStrand	6	chr17	35088957	35089016	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-10.5918
chr11	98833016	98833049	protein_coding	Rara	exon	ENSMUSG00000037992	ProperStrand	37	chr2	130101258	130101310	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-7.5549
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr1	145626149	145626194	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-5.9520
chr16	3856858	3856879	protein_coding	Zfp174	utr3	ENSMUSG00000054939	NonProperStrand	166	chr11	69483134	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	25	-inf
chr19	44469156	44469194	protein_coding	Scd1	utr3	ENSMUSG00000037071	ProperStrand	32	chr2	96464235	96464252	protein_coding	Lrrc4c	intron	ENSMUSG00000050587	ProperStrand	9	1	-18.0968
chr16	11193249	11193305	protein_coding	Rsl1d1	utr3	ENSMUSG00000005846	ProperStrand	65	chr17	24857715	24857805	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	7	-15.8240
chr5	105939222	105939302	SINE	B1F	Alu	chr5B1F105939201	ProperStrand	1	chr5	105939094	105939184	SINE	B3	B2	chr5B3105938978	ProperStrand	1	1	-inf
chr8	96826011	96826101	protein_coding	Nup93	exon	ENSMUSG00000032939	ProperStrand	43	chr11	69483198	69483278	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.0333
chr5	120570424	120570442	protein_coding	Rbm19	intron	ENSMUSG00000029594	ProperStrand	40	chr1	88247814	88247835	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-5.8908
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr2	130103751	130103799	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-1.9113
chr2	130458838	130458869	protein_coding	Prosapip1	utr3	ENSMUSG00000037703	ProperStrand	11	chr2	158185576	158185666	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-9.9265
chr2	132373308	132373347	protein_coding	Gpcpd1	exon	ENSMUSG00000027346	ProperStrand	17	chr15	5068416	5068480	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-8.5996
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-2.2811
chr15	88957646	88957829	protein_coding	Hdac10	exon	ENSMUSG00000062906	ProperStrand	9	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-9.0452
chr4	133801679	133801695	lincRNA	E130218I03Rik	exon	ENSMUSG00000086322	NonProperStrand	43	chr11	77994686	77994931	protein_coding	Rpl23a	exon	ENSMUSG00000058546	ProperStrand	121	1	-12.5774
chr11	97641452	97641480	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	chr17	35087912	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	3	-2.4039
chr9	103401280	103401296	protein_coding	Tmem108	exon	ENSMUSG00000042757	NonProperStrand	323	chr1	90598741	90598757	protein_coding	Arl4c	utr5	ENSMUSG00000049866	ProperStrand	25	1	-11.7118
chr4	131865884	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr19	8799410	8799433	snoRNA	ENSMUSG00000065280_SNORD28	.	ENSMUSG00000065280	ProperStrand	269	4	-1.4138
chr11	116299925	116300005	protein_coding	Fam100b	utr3	ENSMUSG00000050628	ProperStrand	97	chr8	98270005	98270095	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-4.6118
chr19	8798484	8798550	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	chr19	8800119	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	3	-2.0840
chr4	138921550	138922357	protein_coding	C230096C10Rik	exon	ENSMUSG00000078517	ProperStrand	69	chr7	118219574	118219645	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	7	-20.6211
chr8	26630134	26630152	protein_coding	Fgfr1	intron	ENSMUSG00000091895	ProperStrand	16	chr12	81618875	81618892	snoRNA	ENSMUSG00000093141_AC163282.1	.	ENSMUSG00000093141	ProperStrand	39	1	-16.8515
chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	chr14	14787928	14787951	protein_coding	Thoc7	intron	ENSMUSG00000053453	ProperStrand	22	1	-12.6521
chr18	80408505	80408595	protein_coding	Gm16286	exon	ENSMUSG00000024571	ProperStrand	15	chr11	69483200	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-5.0353
chr3	129338416	129338506	protein_coding	Elovl6	utr3	ENSMUSG00000041220	ProperStrand	59	chr11	116938618	116938698	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-6.1923
chr15	82725599	82725637	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	chr10	127513325	127513397	protein_coding	Ptges3	utr3	ENSMUSG00000071072	ProperStrand	89	2	-12.3660
chr12	101437896	101441813	protein_coding	Calm1	exon	ENSMUSG00000001175	ProperStrand	23	chr18	35714144	35714224	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-5.2752
chr5	24191704	24191721	protein_coding	Nub1	utr5	ENSMUSG00000028954	NonProperStrand	2	chr7	116663711	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-9.6916
chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	chr15	82640288	82640348	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	2	-8.0051
chr4	130305595	130305620	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	chr11	69483163	69483263	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	4	-2.0213
chr9	64022763	64025225	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	chr7	116664812	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	6	-1.6524
chr15	8196996	8197063	protein_coding	2410089E03Rik	exon	ENSMUSG00000039801	ProperStrand	43	chr9	120038016	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	2	-8.7908
chr11	86891478	86891495	protein_coding	1200011M11Rik	exon	ENSMUSG00000020495	ProperStrand	8	chr4	131908830	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.7736
chr9	68496931	68496948	LINE	Lx8	L1	chr9Lx868496758	ProperStrand	6	chr8	74843676	74843714	protein_coding	Klf2	exon	ENSMUSG00000055148	ProperStrand	82	1	-17.3281
chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	chr18	35714144	35714277	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	16	-0.7356
chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	2	-4.2154
chr10	127496274	127505759	protein_coding	Ptges3	utr5	ENSMUSG00000071072	ProperStrand	89	chr12	88778632	88778697	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-5.7217
chr7	31426075	31426126	protein_coding	Rbm42	utr3	ENSMUSG00000036733	ProperStrand	9	chr16	23111398	23111450	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.5836
chr2	26494708	26494840	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	chr7	16524110	16524219	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	7	-6.7991
chr10	79755772	79755862	protein_coding	Rps15	intron	ENSMUSG00000063457	ProperStrand	119	chr3	108357277	108357357	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-3.2617
chr4	85016349	85016365	protein_coding	Sh3gl2	intron	ENSMUSG00000028488	NonProperStrand	313	chr19	7494785	7494856	protein_coding	2700081O15Rik	utr5	ENSMUSG00000053080	ProperStrand	9	1	-13.8952
chr10	116162145	116162235	DNA	RCHARR1	MER1_type	chr10RCHARR1116161950	ProperStrand	1	chr10	116162426	116162516	LINE	Lx8	L1	chr10Lx8116162308	NonProperStrand	1	1	-inf
chr4	115484062	115484083	protein_coding	Atpaf1	utr3	ENSMUSG00000028710	ProperStrand	202	chr14	121332578	121334303	protein_coding	Ipo5	exon	ENSMUSG00000030662	ProperStrand	135	2	-14.6411
chr7	130308515	130308570	protein_coding	Tnrc6a	intron	ENSMUSG00000052707	ProperStrand	37	chr7	148634747	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-4.9111
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chrX	71517834	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	4	-8.7046
chr19	45085861	45085897	protein_coding	Peo1	intron	ENSMUSG00000025209	ProperStrand	8	chr11	77995191	77995239	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	2	-16.3836
chr12	107076729	107076819	protein_coding	Papola	utr3	ENSMUSG00000021111	ProperStrand	67	chr5	130300473	130300553	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.3223
chrX	71023497	71023593	protein_coding	Srpk3	exon	ENSMUSG00000002007	ProperStrand	6	chr5	108334195	108334254	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-9.5107
chr10	121229549	121229778	protein_coding	Srgap1	exon	ENSMUSG00000020121	ProperStrand	33	chr7	27466699	27466715	protein_coding	Cyp2b23	exon	ENSMUSG00000040650	ProperStrand	39	1	-15.3605
chr13	23654186	23654229	protein_coding	Hist1h3e	exon	ENSMUSG00000069273	ProperStrand	30	chr2	26494766	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.4006
chr6	149256463	149256563	LTR	RLTR47_MM	ERV1	chr6RLTR47_MM149256167	ProperStrand	3	chr7	29136606	29136631	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-8.4253
chr2	162915296	162915315	LTR	RLTR11B	ERVK	chr2RLTR11B162915116	ProperStrand	29	chr3	96526415	96526440	protein_coding	Polr3c	intron	ENSMUSG00000028099	ProperStrand	16	1	-17.5410
chr11	48613931	48613982	protein_coding	Gnb2l1	utr5	ENSMUSG00000020372	ProperStrand	347	chr12	71146391	71146407	protein_coding	Nin	exon	ENSMUSG00000021068	ProperStrand	95	1	-8.8761
chr4	11288365	11288397	protein_coding	Esrp1	exon	ENSMUSG00000040728	ProperStrand	12	chr18	35714219	35714266	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-6.5851
chr19	46398962	46398978	protein_coding	Psd	exon	ENSMUSG00000037126	ProperStrand	3	chr11	106362638	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-13.7636
chr7	74378811	74378837	protein_coding	Mef2a	utr3	ENSMUSG00000030557	ProperStrand	18	chr5	121655036	121655153	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	4	-18.5434
chr12	77665929	77665951	protein_coding	Plekhg3	exon	ENSMUSG00000052609	ProperStrand	19	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-10.4849
chr2	51964792	51964906	protein_coding	Rif1	exon	ENSMUSG00000036202	ProperStrand	201	chr5	115939520	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	6	-20.3427
chr11	75322045	75322102	protein_coding	Prpf8	utr3	ENSMUSG00000020850	ProperStrand	255	chr6	71832550	71832650	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-2.8928
chr2	130101985	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	chr5	130300418	130300553	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	32	-2.3195
chr15	102266085	102266124	protein_coding	Sp1	utr3	ENSMUSG00000001280	ProperStrand	124	chr17	24857720	24857810	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.1914
chr2	145545007	145545029	lincRNA	BC039771	intron	ENSMUSG00000087594	ProperStrand	12	chr12	112779228	112779287	protein_coding	Eif5	intron	ENSMUSG00000021282	ProperStrand	125	1	-15.1074
chrX	102252293	102252376	lincRNA	5530601H04Rik	intron	ENSMUSG00000087174	ProperStrand	15	chr18	35714220	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	12	-inf
chr10	87623623	87623665	protein_coding	Nup37	exon	ENSMUSG00000035351	ProperStrand	11	chr11	97642952	97643021	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-5.6855
chr10	115874668	115874685	protein_coding	Kcnmb4	intron	ENSMUSG00000054934	NonProperStrand	11	chr11	106362304	106362332	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-9.2711
chr8	34743616	34743696	protein_coding	Ubxn8	intron	ENSMUSG00000052906	ProperStrand	4	chr2	130101996	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-10.9807
chr12	111859833	111859879	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr7	108440949	108440967	protein_coding	Atg16l2	intron	ENSMUSG00000047767	ProperStrand	121	1	-7.1548
chr3	97950652	97950687	protein_coding	Notch2	exon	ENSMUSG00000027878	ProperStrand	86	chr9	120039631	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.6773
chr10	82456767	82456785	protein_coding	Chst11	intron	ENSMUSG00000034612	ProperStrand	170	chr11	6428108	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.4698
chr2	150735319	150735339	protein_coding	Gins1	utr5	ENSMUSG00000027454	ProperStrand	51	chr3	35725890	35725907	protein_coding	Atp11b	exon	ENSMUSG00000037400	NonProperStrand	18	1	-16.0779
chr11	106362556	106362603	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	chr13	90238664	90238714	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	1	-2.9417
chr18	16586960	16586981	SINE	ID_B1	B4	chr18ID_B116586913	NonProperStrand	1	chr2	26493391	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	1	-inf
chr11	69750790	69750880	protein_coding	Ybx2	intron	ENSMUSG00000018554	ProperStrand	17	chr5	121655065	121655145	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-6.2021
chr19	47097873	47097937	protein_coding	Ina	exon	ENSMUSG00000034336	ProperStrand	27	chr1	187066803	187066893	snoRNA	ENSMUSG00000077571_Snora36b	.	ENSMUSG00000077571	ProperStrand	244	1	-12.1164
chr8	130538331	130538421	DNA	RCHARR1	MER1_type	chr8RCHARR1130538334	ProperStrand	1	chr1	74246576	74246666	SINE	B1_Mus2	Alu	chr1B1_Mus274246570	ProperStrand	1	1	-inf
chr2	90235294	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	20673185	20673201	protein_coding	A230050P20Rik	utr5	ENSMUSG00000038884	ProperStrand	19	1	-6.7268
chr9	63868722	63868738	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	chr15	98356819	98356912	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	1	-3.2020
chr8	83138737	83138753	protein_coding	Frem3	exon	ENSMUSG00000042353	NonProperStrand	53	chr10	23505152	23505204	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-2.6692
chr8	13416896	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr1	87983916	87983997	snoRNA	ENSMUSG00000077274_SNORA26	.	ENSMUSG00000077274	ProperStrand	361	2	-5.2336
chr17	25995745	25996076	protein_coding	Wdr90	exon	ENSMUSG00000073434	ProperStrand	91	chr10	23505192	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-1.5011
chr5	122691914	122691930	protein_coding	Hvcn1	utr3	ENSMUSG00000064267	ProperStrand	182	chr11	68886972	68887039	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-2.1640
chr7	117970091	117970123	protein_coding	Rnf141	intron	ENSMUSG00000030788	ProperStrand	6	chr16	23110491	23110527	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-11.4714
chr2	32079489	32079566	protein_coding	Prrc2b	exon	ENSMUSG00000039262	ProperStrand	344	chr17	24665446	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	5	-9.2009
chr13	81814276	81814307	protein_coding	Polr3g	utr3	ENSMUSG00000035834	ProperStrand	14	chr5	121655030	121655062	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-6.5960
chr3	32348845	32348882	protein_coding	Pik3ca	exon	ENSMUSG00000027665	ProperStrand	23	chr4	131865407	131865460	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	2	-9.5962
chr17	23897760	23897860	protein_coding	Flywch1	exon	ENSMUSG00000040097	ProperStrand	15	chr17	24665436	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-7.7031
chr4	134781985	134782001	protein_coding	Clic4	exon	ENSMUSG00000037242	ProperStrand	84	chr7	116664823	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	6	-12.3577
chr10	80728476	80729528	protein_coding	Mrpl54	exon	ENSMUSG00000034932	ProperStrand	4	chr16	23110966	23111010	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-8.2228
chr17	68092655	68094408	protein_coding	Lama1	exon	ENSMUSG00000032796	ProperStrand	168	chr17	13112529	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-2.6874
chr2	179322379	179630616	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr4	131908689	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-0.9921
chrX	34622966	34623023	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	NonProperStrand	26	chr11	69483150	69483250	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	NonProperStrand	35	1	-16.1233
chr10	60692417	60692433	protein_coding	Adamts14	exon	ENSMUSG00000059901	NonProperStrand	127	chr18	35716831	35716879	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.0594
chr1	73967548	73967638	protein_coding	Tns1	exon	ENSMUSG00000055322	ProperStrand	63	chr2	158182211	158182291	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-4.9081
chr8	63461647	63461687	protein_coding	Clcn3	utr5	ENSMUSG00000004319	ProperStrand	93	chr14	21834222	21838522	protein_coding	Vcl	utr5	ENSMUSG00000021823	ProperStrand	48	1	-12.8821
chr14	76247930	76247959	protein_coding	Tpt1	utr3	ENSMUSG00000060126	ProperStrand	236	chr1	162968212	162968289	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-4.1578
chr6	70794801	70794819	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chr5	108336363	108336407	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-3.1182
chr2	4829164	4829180	protein_coding	Sephs1	utr3	ENSMUSG00000026662	NonProperStrand	271	chr2	130101260	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-3.6869
chr1	121368155	121368255	protein_coding	Ralb	utr3	ENSMUSG00000004451	ProperStrand	17	chr11	62416598	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-7.6793
chr2	180317555	180317625	protein_coding	1600027N09Rik	exon	ENSMUSG00000027569	ProperStrand	7	chr5	130300503	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	4	-inf
chrX	166427585	166427685	protein_coding	Mid1	utr3	ENSMUSG00000035299	ProperStrand	209	chr8	129468746	129468797	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-2.1713
chr13	96435625	96438336	protein_coding	Iqgap2	exon	ENSMUSG00000021676	ProperStrand	19	chr2	158182156	158182210	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-7.2845
chr17	50423669	50423730	protein_coding	Dazl	intron	ENSMUSG00000010592	ProperStrand	10	chr9	64023229	64023329	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	1	-12.1056
chr19	44188396	44188491	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	NonProperStrand	9	chr1	64974226	64974245	protein_coding	Plekhm3	intron	ENSMUSG00000051344	NonProperStrand	8	1	-18.7584
chr4	80995165	81002234	protein_coding	Mpdz	exon	ENSMUSG00000028402	ProperStrand	21	chr7	133612742	133612822	protein_coding	Sh2b1	exon	ENSMUSG00000030733	ProperStrand	17	3	-20.0436
chrX	135770506	135770522	protein_coding	Mum1l1	exon	ENSMUSG00000042515	ProperStrand	21	chr19	8798740	8798756	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-6.8746
chr17	66466329	66466412	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	chr5	148113281	148113297	protein_coding	Cdx2	utr3	ENSMUSG00000029646	ProperStrand	276	1	-6.8150
chr18	73693107	73693149	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr7	117189944	117190063	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	23	-4.0407
chr11	102737997	102738016	lincRNA	Gm17536	intron	ENSMUSG00000091056	ProperStrand	15	chr16	23111734	23111754	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.3973
chr10	80129516	80129644	protein_coding	Mknk2	utr3	ENSMUSG00000020190	ProperStrand	18	chr6	24684480	24684497	protein_coding	Hyal6	exon	ENSMUSG00000029679	NonProperStrand	114	1	-14.4732
chr4	154901559	154901605	protein_coding	Gnb1	utr5	ENSMUSG00000029064	ProperStrand	69	chr9	63868722	63868739	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	1	-8.3070
chr17	22190049	22190065	protein_coding	Zfp943	intron	ENSMUSG00000053347	NonProperStrand	2	chr19	8963027	8963084	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-inf
chr10	79879838	79879882	protein_coding	Tcf3	exon	ENSMUSG00000020167	ProperStrand	73	chr1	88247759	88247859	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	3	-11.2097
chr2	90235298	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	140551528	140552218	protein_coding	Atp13a2	exon	ENSMUSG00000036622	ProperStrand	39	1	-5.2962
chr1	40045833	40045856	protein_coding	Map4k4	exon	ENSMUSG00000026074	ProperStrand	348	chr6	118040235	118040251	protein_coding	Rasgef1a	utr3	ENSMUSG00000030134	NonProperStrand	7	1	-14.2160
chr9	40611872	40612385	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr17	35089181	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	2	-2.0137
chr7	24779190	24779213	SINE	ID_B1	B4	chr7ID_B124779183	NonProperStrand	54	chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	1	-9.2764
chr7	34918238	34918254	protein_coding	Wtip	utr5	ENSMUSG00000036459	NonProperStrand	9	chr7	116663635	116663725	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-6.1447
chrX	11635879	11635957	protein_coding	Bcor	exon	ENSMUSG00000040363	ProperStrand	20	chr4	8769991	8770009	protein_coding	Chd7	intron	ENSMUSG00000041235	NonProperStrand	45	1	-16.1119
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr7	52382768	52382832	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-1.1356
chr9	96374277	96374295	protein_coding-noncoding	Rnf7	utr3	ENSMUSG00000051234	ProperStrand	1	chr18	63238393	63238410	protein_coding	Fam38b	exon	ENSMUSG00000041482	NonProperStrand	50	1	-inf
chr6	126967112	126974011	protein_coding	Fgf6	exon	ENSMUSG00000000183	NonProperStrand	2	chr4	116828379	116828451	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	2	-inf
chr7	30807926	30808013	protein_coding	Zfp568	exon	ENSMUSG00000074221	ProperStrand	110	chr2	166890561	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	4	-18.8240
chr16	24190309	24190389	LINE	Lx6	L1	chr16Lx624189812	ProperStrand	1	chr9	15263963	15264053	LINE	Lx6	L1	chr9Lx615263107	ProperStrand	1	1	-inf
chr9	63128865	63141350	protein_coding	Map2k5	exon	ENSMUSG00000058444	ProperStrand	193	chr7	150717298	150717367	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-3.2945
chr15	71826365	71826382	protein_coding	Col22a1	intron	ENSMUSG00000079022	NonProperStrand	7	chr5	115939534	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-12.2821
chr9	14849525	14849650	protein_coding	Panx1	utr5	ENSMUSG00000031934	ProperStrand	5	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-7.2327
chr2	144087322	144087440	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	chr2	166890835	166890858	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	1	-3.7277
chr9	114421448	114421495	protein_coding	Trim71	utr3	ENSMUSG00000079259	ProperStrand	162	chr2	32818885	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-3.5801
chr10	77453564	77454767	protein_coding	Pfkl	exon	ENSMUSG00000020277	ProperStrand	179	chr4	122968646	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-4.1659
chr5	100050201	100050219	protein_coding	A930011G23Rik	intron	ENSMUSG00000089809	ProperStrand	9	chr16	23110839	23110860	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.9939
chr11	83856488	83856505	protein_coding	Synrg	utr3	ENSMUSG00000034940	NonProperStrand	4	chr11	69483136	69483191	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-7.8378
chr3	32647401	32647417	protein_coding	Ndufb5	exon	ENSMUSG00000027673	NonProperStrand	1	chr11	69481387	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-inf
chr5	149303658	149303678	DNA	MER2	MER2_type	chr5MER2149303633	NonProperStrand	1	chr8	73419682	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-inf
chr18	48095356	48095380	LINE	L1VL1	L1	chr18L1VL148094761	ProperStrand	5	chr9	119296099	119296219	protein_coding	Xylb	intron	ENSMUSG00000035769	NonProperStrand	11	5	-inf
chr12	34642676	34642692	protein_coding	Twist1	utr5	ENSMUSG00000035799	ProperStrand	3	chr8	86664519	86664677	protein_coding	Cc2d1a	exon	ENSMUSG00000036686	NonProperStrand	3	1	-inf
chr16	28927295	28927385	protein_coding	1600021P15Rik	intron	ENSMUSG00000051065	ProperStrand	6	chr2	158185576	158185656	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-11.2225
chr5	111082719	111084830	protein_coding	Ddx51	exon	ENSMUSG00000029504	ProperStrand	54	chr16	23111375	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-5.9602
chr3	8554819	8554842	protein_coding	Stmn2	exon	ENSMUSG00000027500	ProperStrand	16	chr4	131908689	131908799	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.4136
chr2	120125917	120125956	protein_coding	Pla2g4f	utr3	ENSMUSG00000046971	ProperStrand	4	chr12	106269313	106269403	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-9.7090
chr2	173132069	173132088	SINE	MIRb	MIR	chr2MIRb173132029	ProperStrand	1	chr19	8963027	8963060	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-inf
chrX	72661761	72661778	protein_coding	Mtcp1	utr5	ENSMUSG00000090110	ProperStrand	19	chr10	107800719	107800799	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	1	-10.3962
chr12	112112201	112112281	protein_coding	Cinp	exon	ENSMUSG00000021276	ProperStrand	18	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-10.5959
chr16	30362064	30362712	protein_coding	Atp13a3	exon	ENSMUSG00000022533	ProperStrand	45	chr19	8963088	8963178	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	8	-inf
chr11	120148960	120148976	protein_coding	Bahcc1	exon	ENSMUSG00000039741	NonProperStrand	268	chr7	29136524	29136632	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-0.9070
chr3	30713198	30717454	protein_coding	Sec62	exon	ENSMUSG00000027706	ProperStrand	12	chr4	131908687	131908710	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.9639
chr19	8799022	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	chr13	90238639	90238720	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	5	-8.5167
chr19	8799022	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	chr16	38158104	38158168	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	6	-10.7025
chr8	113447140	113447166	snoRNA	ENSMUSG00000065100_SNORA57	.	ENSMUSG00000065100	ProperStrand	81	chr3	123210855	123210955	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.5972
chr10	88240991	88241076	protein_coding	Utp20	exon	ENSMUSG00000004356	ProperStrand	45	chr19	46080183	46080199	protein_coding	Hps6	exon	ENSMUSG00000074811	NonProperStrand	45	1	-14.4730
chr14	70710774	70713486	protein_coding	Slc39a14	exon	ENSMUSG00000022094	ProperStrand	17	chr16	23110910	23111000	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.8783
chr1	74398548	74398638	protein_coding	Pnkd	utr3	ENSMUSG00000026179	ProperStrand	22	chr7	25785738	25785957	protein_coding	Atp1a3	exon	ENSMUSG00000040907	ProperStrand	66	1	-15.1579
chr1	71076102	71076178	protein_coding	Bard1	utr3	ENSMUSG00000026196	ProperStrand	44	chr1	162965540	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.8495
chr4	123153460	123153550	protein_coding	Macf1	utr5	ENSMUSG00000028649	ProperStrand	320	chr15	34370586	34370666	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-0.8930
chr17	31722744	31722760	protein_coding	Pknox1	intron	ENSMUSG00000006705	ProperStrand	110	chr2	179911324	179911373	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	1	-8.4826
chr7	128023917	128023973	protein_coding	Eef2k	exon	ENSMUSG00000035064	ProperStrand	27	chr2	26494708	26494776	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.6040
chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr6	52589225	52589300	snoRNA	ENSMUSG00000064792_SNORA32	.	ENSMUSG00000064792	ProperStrand	151	3	-5.4620
chr4	137104006	137116389	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	chr1	162967506	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	4	-1.1580
chr15	102043421	102043469	protein_coding	Zfp740	utr3	ENSMUSG00000046897	ProperStrand	34	chr1	72272906	72272937	snRNA	ENSMUSG00000075752_U2	.	ENSMUSG00000075752	ProperStrand	535	1	-10.0783
chr10	62482146	62482236	protein_coding	Hnrnph3	exon	ENSMUSG00000020069	NonProperStrand	6	chr10	62480796	62480876	protein_coding	Rufy2	utr3	ENSMUSG00000020070	ProperStrand	5	2	-19.0259
chr4	86221914	86222014	protein_coding	Rraga	exon	ENSMUSG00000070934	ProperStrand	13	chr16	23111701	23111751	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.6795
chr8	127203389	127203405	protein_coding	Ttc13	intron	ENSMUSG00000037300	NonProperStrand	10	chr16	23110981	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.7978
chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-2.2487
chr17	24859693	24859727	protein_coding	Ndufb10	exon	ENSMUSG00000040048	ProperStrand	6	chr3	68889072	68889140	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	2	-12.8230
chr1	193925421	193925437	protein_coding	Rcor3	intron	ENSMUSG00000037395	ProperStrand	25	chr11	77995191	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-7.9320
chr9	120483267	120483305	protein_coding	Rpl14	exon	ENSMUSG00000025794	ProperStrand	123	chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-4.4527
chr19	32464273	32464289	lincRNA	2700046G09Rik	exon	ENSMUSG00000024893	ProperStrand	59	chr5	108333571	108333626	snoRNA	ENSMUSG00000064453_Snord21	.	ENSMUSG00000064453	ProperStrand	201	1	-10.9221
chr2	154683129	154683167	protein_coding	Raly	exon	ENSMUSG00000027593	ProperStrand	116	chr4	41248388	41249658	protein_coding	Dcaf12	exon	ENSMUSG00000028436	ProperStrand	33	3	-18.9792
chr13	11928713	11928759	protein_coding	Ryr2	intron	ENSMUSG00000021313	ProperStrand	61	chr10	23505558	23505595	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-7.5171
chr10	85412359	85414181	protein_coding	D10Wsu52e	exon	ENSMUSG00000001783	ProperStrand	45	chr9	20781056	20781136	protein_coding	S1pr2	utr5	ENSMUSG00000043895	ProperStrand	18	12	-19.2044
chr14	96988090	96988180	snoRNA	ENSMUSG00000064581_SNORA30	.	ENSMUSG00000064581	ProperStrand	146	chr7	134671387	134671477	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	43	-20.3246
chr17	14042591	14042665	protein_coding	Mllt4	utr3	ENSMUSG00000068036	ProperStrand	156	chr10	39978461	39978484	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-3.6390
chr3	104094280	104094299	LTR	MTD	MaLR	chr3MTD104093949	NonProperStrand	6	chr7	51505506	51505591	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	1	-13.5381
chr13	98253825	98253842	lincRNA	Gm11019	intron	ENSMUSG00000078952	ProperStrand	113	chr15	34370569	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-2.4253
chr11	22899069	22899109	protein_coding	Cct4	exon	ENSMUSG00000007739	ProperStrand	81	chr19	9952626	9952731	protein_coding	Incenp	exon	ENSMUSG00000024660	ProperStrand	111	1	-11.4742
chr9	21934462	21934478	protein_coding	Acp5	exon	ENSMUSG00000001348	ProperStrand	66	chr7	117166721	117166780	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-4.6327
chr4	18020485	18020501	protein_coding	Mmp16	exon	ENSMUSG00000028226	ProperStrand	55	chr11	97372833	97372849	protein_coding	Srcin1	utr3	ENSMUSG00000038453	NonProperStrand	21	1	-15.5905
chr4	3762400	3762424	protein_coding	Rps20	exon	ENSMUSG00000028234	ProperStrand	71	chr5	130295434	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-4.9221
chr19	11861067	11861083	protein_coding	Stx3	exon	ENSMUSG00000041488	NonProperStrand	5	chr9	120038520	120038610	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-8.0049
chr11	97489600	97489617	protein_coding	E130012A19Rik	exon	ENSMUSG00000043439	NonProperStrand	110	chr11	48614367	48614434	snoRNA	ENSMUSG00000064500_SNORD95	.	ENSMUSG00000064500	ProperStrand	100	1	-11.0697
chr12	99497602	99497618	protein_coding	Galc	utr5	ENSMUSG00000021003	NonProperStrand	65	chr16	23111447	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.1508
chr11	19835969	19836071	protein_coding	Spred2	intron	ENSMUSG00000045671	ProperStrand	106	chr1	91358413	91358430	protein_coding	Agap1	intron	ENSMUSG00000055013	ProperStrand	229	1	-9.4856
chr11	62416575	62416599	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr15	79913288	79913347	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-0.9409
chr8	63385137	63385175	protein_coding	2700029M09Rik	intron	ENSMUSG00000038005	ProperStrand	7	chr11	120347051	120349421	protein_coding	Mrpl12	exon	ENSMUSG00000039640	ProperStrand	49	1	-18.5111
chr1	75210423	75210513	protein_coding	Stk16	exon	ENSMUSG00000026201	ProperStrand	17	chr17	35991484	35991820	protein_coding	Mdc1	exon	ENSMUSG00000061607	ProperStrand	85	3	-inf
chr2	29886636	29886658	protein_coding	Spna2	utr3	ENSMUSG00000057738	ProperStrand	222	chr11	6428120	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.1029
chr17	86339609	86339626	SINE	ID	ID	chr17ID86339609	NonProperStrand	9	chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	2	-inf
chr10	93332970	93333010	protein_coding	Metap2	exon	ENSMUSG00000036112	ProperStrand	78	chr2	158182156	158182194	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	3	-10.7564
chr8	107755087	107758458	protein_coding	D230025D16Rik	exon	ENSMUSG00000031889	ProperStrand	20	chr2	158185529	158185602	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	6	-19.3830
chr13	32897387	32898678	protein_coding	Wrnip1	exon	ENSMUSG00000021400	ProperStrand	16	chrX	152009278	152009294	protein_coding	Ptchd1	exon	ENSMUSG00000041552	NonProperStrand	294	1	-12.8145
chr5	102092856	102092872	protein_coding	Nkx6-1	exon	ENSMUSG00000035187	NonProperStrand	10	chr7	30074412	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-14.0975
chr1	187111016	187111041	protein_coding	Iars2	exon	ENSMUSG00000026618	ProperStrand	68	chr8	74446729	74446745	protein_coding	Zfp617	intron	ENSMUSG00000066880	NonProperStrand	208	1	-10.5679
chr18	83173888	83173904	protein_coding	Zfp516	utr3	ENSMUSG00000058881	ProperStrand	25	chr7	29136579	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.9451
chr10	62708570	62769269	protein_coding	Herc4	utr5	ENSMUSG00000020064	ProperStrand	14	chr7	116663633	116663724	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-8.7052
chr2	157119950	157120991	protein_coding	Rpn2	exon	ENSMUSG00000027642	ProperStrand	363	chr8	19983155	19983227	pseudogene	2610005L07Rik	.	ENSMUSG00000071793	ProperStrand	40	1	-10.5243
chr19	3906682	3906698	protein_coding	Tcirg1	utr5	ENSMUSG00000001750	NonProperStrand	15	chr6	70794801	70794819	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	1	-14.2437
chr7	139946060	139946137	protein_coding	Fam53b	intron	ENSMUSG00000030956	ProperStrand	8	chr11	116938557	116938647	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-10.2670
chr16	29813103	29813122	lincRNA	Gm17734	intron	ENSMUSG00000090506	ProperStrand	1	chr4	131908752	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-inf
chr15	100004966	100005700	protein_coding	Dip2b	exon	ENSMUSG00000023026	ProperStrand	48	chr6	115757992	115758041	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-5.9099
chr4	41152584	41152649	protein_coding	Ubap2	exon	ENSMUSG00000028433	ProperStrand	292	chr5	121655135	121655156	protein_coding	Rpl6	intron	ENSMUSG00000029614	ProperStrand	332	1	-6.7334
chr2	101792230	101792320	protein_coding	Ldlrad3	utr3	ENSMUSG00000048058	ProperStrand	53	chr14	52829483	52829563	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-8.4507
chr4	151432614	151432714	protein_coding	Nol9	utr3	ENSMUSG00000028948	ProperStrand	93	chr8	124103115	124103142	protein_coding	Gm20388	intron	ENSMUSG00000092329	NonProperStrand	203	1	-9.9884
chr12	31975135	31975152	protein_coding	Lamb1	intron	ENSMUSG00000002900	NonProperStrand	45	chr10	127527140	127527159	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	1	-9.2443
chr11	12326201	12326291	protein_coding	Cobl	intron	ENSMUSG00000020173	ProperStrand	133	chr15	98350175	98350255	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-3.2691
chr6	71499389	71499421	protein_coding	Chmp3	intron	ENSMUSG00000053119	ProperStrand	16	chr4	131908254	131908344	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.6705
chr11	44716246	44716267	protein_coding	Ebf1	intron	ENSMUSG00000057098	NonProperStrand	6	chr7	29136525	29136570	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-6.8330
chr17	25612587	25612604	protein_coding	Tekt4	exon	ENSMUSG00000024175	NonProperStrand	1	chr5	54044692	54044729	protein_coding	Rbpj	exon	ENSMUSG00000039191	ProperStrand	96	1	-inf
chr4	6321707	6321843	protein_coding	Sdcbp	utr3	ENSMUSG00000028249	ProperStrand	10	chr2	32087228	32087246	protein_coding	Prrc2b	utr3	ENSMUSG00000039262	ProperStrand	344	4	-19.8904
chr13	113295044	113295134	protein_coding	Il6st	utr3	ENSMUSG00000021756	ProperStrand	34	chr4	126700963	126703128	protein_coding	Sfpq	exon	ENSMUSG00000028820	ProperStrand	340	1	-10.9837
chr4	131865378	131865468	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	NonProperStrand	15	chr16	23110926	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	NonProperStrand	93	1	-15.2562
chr5	145892234	145892361	protein_coding	Pdap1	exon	ENSMUSG00000029623	ProperStrand	112	chr7	117190032	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	6	-13.3187
chr16	73893278	73893296	protein_coding	Robo2	utr3	ENSMUSG00000052516	NonProperStrand	28	chr10	23505150	23505270	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-6.5117
chr6	147075142	147075160	LTR	ORR1E	MaLR	chr6ORR1E147075123	NonProperStrand	1	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-inf
chr13	21988824	21988841	miRNA	Mir1983	.	ENSMUSG00000088148	ProperStrand	23	chr7	118219576	118219661	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	5	-19.0671
chr2	57090809	57090827	protein_coding	Gpd2	utr5	ENSMUSG00000026827	ProperStrand	93	chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	1	-7.2360
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr3	123210854	123210974	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-0.7266
chr14	99438758	99438842	protein_coding	Mzt1	intron	ENSMUSG00000033186	ProperStrand	6	chr18	33954820	33954910	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-8.1162
chr11	100273103	100274019	protein_coding	Leprel4	utr3	ENSMUSG00000006931	ProperStrand	32	chr7	29136525	29136575	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.4817
chr19	61302460	61302476	protein_coding	Csf2ra	exon	ENSMUSG00000059326	ProperStrand	17	chr4	139007763	139007812	protein_coding	Ubr4	exon	ENSMUSG00000066036	ProperStrand	304	1	-12.6238
chr11	98603025	98603042	protein_coding	Thra	intron	ENSMUSG00000058756	ProperStrand	63	chr4	131865855	131865890	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.6928
chr9	95524998	95525035	snoRNA	ENSMUSG00000065346_SNORA4	.	ENSMUSG00000065346	ProperStrand	142	chr6	71832551	71832651	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-3.9582
chr3	102851072	102853604	protein_coding	Csde1	exon	ENSMUSG00000068823	ProperStrand	122	chr19	8800386	8800466	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-2.2792
chr9	120860011	120865084	protein_coding	Ctnnb1	exon	ENSMUSG00000006932	ProperStrand	214	chr11	97642952	97643070	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	4	-3.4916
chr6	142449931	142453985	protein_coding	Ldhb	exon	ENSMUSG00000030246	ProperStrand	224	chr7	148634714	148634782	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	7	-13.4341
chrX	72214248	72214264	protein_coding-noncoding	Gab3	utr3	ENSMUSG00000032750	ProperStrand	420	chr11	62418014	62418044	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-2.0046
chr8	125798268	125798419	protein_coding	Fanca	exon	ENSMUSG00000032815	ProperStrand	32	chr2	26493406	26493496	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-4.9420
chr1	33828651	33828669	protein_coding	Zfp451	intron	ENSMUSG00000042197	NonProperStrand	393	chr19	38470512	38470530	protein_coding	Tmem20	utr5	ENSMUSG00000044026	NonProperStrand	23	1	-11.4889
chr6	83318070	83318086	protein_coding	Tet3	exon	ENSMUSG00000034832	NonProperStrand	93	chr11	69483132	69483190	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.7376
chr12	111852420	111905062	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chrX	34622928	34623024	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	5	-1.9551
chr11	75345764	75345780	protein_coding	Slc43a2	utr5	ENSMUSG00000038178	ProperStrand	45	chr11	97643003	97643060	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.9748
chr1	182503811	182503903	protein_coding	Parp1	exon	ENSMUSG00000026496	ProperStrand	227	chr2	63936036	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-5.2395
chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	chr17	39985501	39985525	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	2	-5.2704
chr2	90235308	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	147130854	147130944	protein_coding	Utf1	utr3	ENSMUSG00000047751	ProperStrand	67	3	-10.2625
chr11	97891177	97891594	protein_coding	Rpl19	exon	ENSMUSG00000017404	ProperStrand	120	chr11	69481335	69481415	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-2.0101
chr4	61342748	61342852	LINE	L1Md_A	L1	chr4L1Md_A61339726	ProperStrand	1	chr2	26767784	26767809	snoRNA	ENSMUSG00000064829_SNORD36	.	ENSMUSG00000064829	ProperStrand	98	1	-inf
chrX	20435586	20435905	protein_coding	Araf	exon	ENSMUSG00000001127	ProperStrand	23	chr4	136106806	136106886	protein_coding	Kdm1a	exon	ENSMUSG00000036940	ProperStrand	83	1	-14.5981
chr17	35380109	35380149	protein_coding	Ddx39b	utr5	ENSMUSG00000019432	ProperStrand	119	chr11	62416604	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-6.5013
chr11	119299055	119299097	protein_coding	Rnf213	exon	ENSMUSG00000070327	ProperStrand	20	chr16	23110919	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-3.0614
chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	chr19	8798740	8798813	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	8	-0.9075
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr19	23288649	23289139	protein_coding	Smc5	exon	ENSMUSG00000024943	ProperStrand	146	1	-9.5865
chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr18	35722159	35722175	protein_coding	Matr3	intron	ENSMUSG00000037236	NonProperStrand	2	1	-13.8986
chr17	27559700	27559717	protein_coding	Grm4	utr3	ENSMUSG00000063239	ProperStrand	147	chr16	18240809	18240889	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	1	-7.3376
chr8	46427807	46427824	protein_coding	Fam149a	exon	ENSMUSG00000070044	NonProperStrand	12	chr3	123210854	123210971	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.0354
chr8	98395812	98395881	protein_coding	Got2	exon	ENSMUSG00000031672	ProperStrand	85	chr13	76341035	76341055	protein_coding	Fam81b	intron	ENSMUSG00000078966	NonProperStrand	220	1	-10.0080
chr8	73308797	73308887	protein_coding	Mast3	intron	ENSMUSG00000031833	ProperStrand	23	chr16	23110909	23110989	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.4133
chr19	44188414	44188491	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr1	173041632	173041649	tRNA	tRNA710-ValCAC	.	1810070	ProperStrand	206	1	-5.3632
chr6	35139250	35139949	protein_coding	Nup205	exon	ENSMUSG00000038759	ProperStrand	56	chr2	158182156	158182232	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-5.1363
chr16	91729699	91729723	protein_coding	Itsn1	utr5	ENSMUSG00000022957	ProperStrand	172	chr15	99548653	99548669	protein_coding	Gpd1	exon	ENSMUSG00000023019	ProperStrand	40	1	-12.0187
chr6	9041873	9041891	protein_coding	Nxph1	intron	ENSMUSG00000046178	ProperStrand	16	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-7.8497
chr6	122679993	122680015	protein_coding	Slc2a3	exon	ENSMUSG00000003153	ProperStrand	682	chr6	122830768	122831522	protein_coding	Necap1	exon	ENSMUSG00000030327	ProperStrand	12	2	-18.5443
chr4	94254037	94254085	protein_coding	Plaa	exon	ENSMUSG00000028577	ProperStrand	40	chrX	54312186	54313080	protein_coding	Htatsf1	exon	ENSMUSG00000067873	ProperStrand	48	3	-20.9379
chr10	80012280	80012308	protein_coding	Rexo1	exon	ENSMUSG00000047417	ProperStrand	46	chr3	100684969	100684990	protein_coding	Vtcn1	intron	ENSMUSG00000051076	NonProperStrand	3	2	-inf
chr15	75900781	75900841	protein_coding	Puf60	exon	ENSMUSG00000002524	ProperStrand	18	chr17	13112549	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-6.9578
chr7	149050358	149050374	protein_coding	Muc5b	exon	ENSMUSG00000066108	ProperStrand	5	chr10	23505152	23505204	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-5.7809
chr10	21069149	21069179	protein_coding	Hbs1l	exon	ENSMUSG00000019977	ProperStrand	27	chr11	97642970	97643060	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-9.6647
chrX	34622930	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	NonProperStrand	26	chr3	123210889	123210969	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	NonProperStrand	45	1	-15.5804
chr12	55835615	55835705	snRNA	ENSMUSG00000075960_U1	.	ENSMUSG00000075960	ProperStrand	210	chr9	120039584	120039622	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-2.4280
chrX	165757402	165757450	protein_coding	Hccs	exon	ENSMUSG00000031352	ProperStrand	6	chr16	23110949	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.7876
chr2	130365469	130366286	protein_coding	Ptpra	exon	ENSMUSG00000027303	ProperStrand	24	chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	2	-16.7293
chr5	89101709	89101751	protein_coding	Grsf1	exon	ENSMUSG00000044221	ProperStrand	24	chr4	131866222	131866292	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-5.4259
chr10	68800774	68800874	protein_coding	Cdk1	utr3	ENSMUSG00000019942	ProperStrand	42	chr2	26494760	26494838	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.7619
chrX	84483699	84483716	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr11	116938685	116938750	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-1.5761
chr2	90235304	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	103055921	103055938	protein_coding	Fmnl1	intron	ENSMUSG00000055805	NonProperStrand	2	1	-11.8388
chr15	80117792	80117810	protein_coding	Cacna1i	utr5	ENSMUSG00000022416	NonProperStrand	9	chr5	147646721	147646797	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	1	-11.8387
chr4	118804850	118805110	protein_coding	Slc2a1	exon	ENSMUSG00000028645	ProperStrand	361	chr9	15123936	15123961	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	NonProperStrand	100	9	-inf
chr19	5466360	5466460	protein_coding	Ctsw	intron	ENSMUSG00000024910	NonProperStrand	2	chr7	148634760	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-11.3325
chr6	30162058	30162074	protein_coding	Ube2h	utr3	ENSMUSG00000039159	ProperStrand	96	chr14	33005085	33005139	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-3.1282
chr2	137893777	137893795	LINE	Lx8	L1	chr2Lx8137893620	ProperStrand	3	chr14	65696794	65696847	protein_coding	Extl3	utr5	ENSMUSG00000021978	ProperStrand	36	2	-inf
chr11	80285945	80285977	protein_coding	Psmd11	utr3	ENSMUSG00000017428	ProperStrand	34	chr10	128014040	128014057	protein_coding	Erbb3	exon	ENSMUSG00000018166	NonProperStrand	12	1	-17.5675
chr7	106627444	106627856	protein_coding	Rps3	utr3	ENSMUSG00000030744	ProperStrand	159	chr19	10615301	10620224	protein_coding	Cpsf7	utr3	ENSMUSG00000034820	ProperStrand	66	3	-20.3382
chr8	111238940	111238956	protein_coding	Zfhx3	utr5	ENSMUSG00000038872	ProperStrand	65	chr7	3156638	3156752	protein_coding	AU018091	intron	ENSMUSG00000054753	ProperStrand	42	1	-13.8707
chr8	32239595	32239612	protein_coding	Rnf122	utr3	ENSMUSG00000039328	NonProperStrand	42	chr1	89673642	89673711	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	2	-6.6202
chr3	88715213	88715230	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr11	77995191	77995242	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	2	-1.8074
chr18	38746344	38746360	protein_coding	Spry4	utr3	ENSMUSG00000024427	ProperStrand	24	chr4	122924412	122924429	protein_coding	Heyl	utr3	ENSMUSG00000032744	ProperStrand	31	1	-16.4914
chr9	64453512	64453529	protein_coding	Megf11	intron	ENSMUSG00000036466	ProperStrand	15	chr9	110540185	110540395	protein_coding	Nbeal2	exon	ENSMUSG00000056724	ProperStrand	161	1	-14.1556
chr2	71721526	71721552	protein_coding	Pdk1	exon	ENSMUSG00000006494	ProperStrand	37	chr3	123210867	123210910	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-5.0375
chr16	23113583	23113618	protein_coding	Eif4a2	utr3	ENSMUSG00000022884	ProperStrand	356	chr6	88435849	88435865	protein_coding	Ruvbl1	exon	ENSMUSG00000030079	NonProperStrand	54	1	-9.9580
chr14	15572352	15572371	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr1	162965550	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.5819
chr11	69547857	69547915	protein_coding	Polr2a	utr3	ENSMUSG00000005198	ProperStrand	200	chr2	89368462	89368479	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	1	-7.9512
chr4	140273628	140274293	protein_coding	Rcc2	exon	ENSMUSG00000040945	ProperStrand	228	chr2	156604763	156604780	protein_coding	Myl9	intron	ENSMUSG00000067818	NonProperStrand	2	1	-18.7257
chr10	86158637	86158696	protein_coding	Hsp90b1	exon	ENSMUSG00000020048	ProperStrand	396	chr17	35299544	35299634	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-1.4768
chr15	82725598	82725637	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	chr7	54443847	54443947	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	6	-21.2087
chr12	109433365	109433446	protein_coding	Ccnk	exon	ENSMUSG00000021258	ProperStrand	31	chr8	13416896	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-7.7724
chr9	78023195	78023240	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr18	63109676	63109692	protein_coding	Apcdd1	exon	ENSMUSG00000071847	NonProperStrand	254	1	-3.1429
chrX	84483701	84483739	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr15	82980104	82980192	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-2.3657
chr10	77640977	77640999	protein_coding	Pwp2	exon	ENSMUSG00000032834	ProperStrand	7	chr8	32260335	32260385	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-8.9777
chr19	11857619	11859888	protein_coding	Stx3	exon	ENSMUSG00000041488	ProperStrand	37	chr1	162966821	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	2	-11.6147
chr4	62318891	62318908	protein_coding	Rgs3	utr3	ENSMUSG00000059810	ProperStrand	40	chr8	73419649	73419742	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	4	-12.7610
chr7	116663634	116663713	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	chr6	38008000	38008059	snoRNA	ENSMUSG00000088263_snoU13	.	ENSMUSG00000088263	ProperStrand	13	1	-5.3924
chr8	108388116	108388206	protein_coding	Nutf2	intron	ENSMUSG00000008450	ProperStrand	39	chr12	106269450	106269530	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-4.9669
chr15	83421949	83425393	protein_coding	Ttll12	exon	ENSMUSG00000016757	ProperStrand	36	chr11	120818168	120818224	protein_coding	Slc16a3	exon	ENSMUSG00000025161	ProperStrand	98	1	-13.3606
chr19	43579408	43579425	protein_coding	Got1	intron	ENSMUSG00000025190	NonProperStrand	147	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.7567
chr14	15572352	15572370	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr11	97642952	97643080	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-3.0958
chr9	114690184	114690226	protein_coding	Cmtm7	intron	ENSMUSG00000032436	ProperStrand	13	chr7	117166802	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	2	-12.6730
chr4	135521534	135521550	protein_coding	Gale	exon	ENSMUSG00000028671	ProperStrand	61	chr16	23111370	23111431	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-2.3846
chr10	80644018	80644067	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr16	67221126	67221145	protein_coding	Cadm2	intron	ENSMUSG00000064115	NonProperStrand	21	1	-8.2008
chr12	74874124	74874144	protein_coding	Prkch	intron	ENSMUSG00000021108	NonProperStrand	12	chr9	15119632	15119667	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.6882
chr14	31827477	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	chr5	108336361	108336457	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	3	-0.9511
chr13	9833551	9833617	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr7	88237709	88237725	protein_coding	Alpk3	exon	ENSMUSG00000038763	NonProperStrand	7	2	-14.9821
chr7	88529496	88529520	protein_coding	Cpeb1	intron	ENSMUSG00000025586	NonProperStrand	29	chr16	23111384	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-4.2647
chr5	140811408	140813645	protein_coding	Nudt1	exon	ENSMUSG00000036639	ProperStrand	6	chr4	131908236	131908291	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-5.6461
chr19	36694569	36694586	lincRNA	1500017E21Rik	exon	ENSMUSG00000087579	ProperStrand	11	chr11	93969858	93969875	protein_coding	Spag9	exon	ENSMUSG00000020859	NonProperStrand	8	1	-19.0255
chr14	60863482	60866181	protein_coding	Nupl1	exon	ENSMUSG00000063895	ProperStrand	16	chr16	23110909	23110953	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-7.9620
chr19	29686039	29686057	protein_coding	Ermp1	utr3	ENSMUSG00000046324	ProperStrand	103	chr17	24857717	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.4498
chr17	47881187	47881267	protein_coding	Tfeb	intron	ENSMUSG00000023990	ProperStrand	78	chr2	158182180	158182270	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-4.4979
chr1	194571820	194571849	snRNA	ENSMUSG00000064881_U5	.	ENSMUSG00000064881	ProperStrand	187	chr2	158205283	158205405	snoRNA	ENSMUSG00000064585_SNORA71	.	ENSMUSG00000064585	ProperStrand	418	1	-7.1589
chr16	85795631	85795647	protein_coding	Adamts1	utr3	ENSMUSG00000022893	ProperStrand	102	chr7	52382242	52382314	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-7.2259
chr17	51877559	51877575	protein_coding	Satb1	utr3	ENSMUSG00000023927	ProperStrand	62	chr2	144091716	144091816	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	ProperStrand	549	2	-14.0022
chr5	140244819	140245257	protein_coding	Ints1	exon	ENSMUSG00000029547	ProperStrand	45	chrX	71269227	71269244	protein_coding	Irak1	utr5	ENSMUSG00000031392	ProperStrand	12	1	-17.2463
chr17	24987714	24987735	protein_coding	Hagh	utr5	ENSMUSG00000024158	ProperStrand	10	chr4	116875135	116875249	snRNA	ENSMUSG00000070228_U5	.	ENSMUSG00000070228	ProperStrand	131	3	-19.9931
chr16	4044045	4044646	protein_coding	Trap1	exon	ENSMUSG00000005981	ProperStrand	25	chr5	108336372	108336462	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-10.7102
chr10	79174399	79174493	protein_coding	Bsg	utr3	ENSMUSG00000023175	ProperStrand	107	chr14	52780157	52780204	protein_coding	Supt16h	utr3	ENSMUSG00000035726	ProperStrand	193	1	-9.8085
chr11	97641452	97641536	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	chr19	8798484	8798517	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-0.6963
chr5	122810105	122810144	protein_coding	Vps29	exon	ENSMUSG00000029462	ProperStrand	8	chr11	98878371	98878468	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-10.3947
chr19	8990128	8990178	protein_coding	Ganab	exon	ENSMUSG00000071650	ProperStrand	145	chr4	122968617	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-4.5651
chr4	118804429	118804497	protein_coding	Slc2a1	intron	ENSMUSG00000028645	ProperStrand	361	chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	3	-12.1909
chr19	5427003	5427019	protein_coding	AI837181	utr3	ENSMUSG00000047423	ProperStrand	2	chr5	121655016	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-11.0755
chr19	47807461	47808042	protein_coding	Sfr1	exon	ENSMUSG00000025066	ProperStrand	15	chr4	131908418	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.7937
chr17	56452587	56454624	protein_coding	Uhrf1	exon	ENSMUSG00000001228	ProperStrand	229	chr1	162966000	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	5	-7.6084
chr15	72932267	72932290	protein_coding	Eif2c2	utr3	ENSMUSG00000036698	ProperStrand	154	chr19	59534008	59534026	protein_coding	Emx2	exon	ENSMUSG00000043969	NonProperStrand	87	1	-10.6747
chr10	60896221	60896241	protein_coding	Eif4ebp2	utr3	ENSMUSG00000020091	ProperStrand	39	chr18	33954858	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-7.2192
chr7	35827001	35827023	protein_coding	Pepd	intron	ENSMUSG00000063931	NonProperStrand	11	chr4	131865392	131865503	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	7	-inf
chr2	150589378	150591249	protein_coding	Entpd6	exon	ENSMUSG00000033068	ProperStrand	12	chr7	118219622	118219642	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-7.3600
chr5	3643584	3643628	protein_coding	Gatad1	exon	ENSMUSG00000007415	ProperStrand	7	chr5	20320797	20320815	protein_coding	Phtf2	intron	ENSMUSG00000039987	ProperStrand	9	1	-19.9681
chr13	51743579	51743703	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	chr2	144087414	144087450	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	7	-9.1849
chr3	89750435	89750451	protein_coding	Atp8b2	exon	ENSMUSG00000060671	ProperStrand	140	chr17	35089182	35089231	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-3.8640
chr12	104254577	104254595	protein_coding	Unc79	intron	ENSMUSG00000021198	ProperStrand	99	chr2	87331323	87331350	protein_coding	Pramel7	exon	ENSMUSG00000025839	ProperStrand	1	1	-inf
chr15	34945625	34945642	protein_coding	Stk3	intron	ENSMUSG00000022329	NonProperStrand	28	chr17	35299522	35299564	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-6.2728
chr17	27893515	27893557	protein_coding	D17Wsu92e	intron	ENSMUSG00000056692	ProperStrand	61	chr3	95980318	95980410	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-6.8247
chr17	95160908	95218242	protein_coding	2610044O15Rik	exon	ENSMUSG00000066057	NonProperStrand	70	chr15	34370545	34370621	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-3.2670
chr10	121229549	121229778	protein_coding	Srgap1	exon	ENSMUSG00000020121	ProperStrand	33	chr7	117190028	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.4547
chr12	17552950	17553033	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr8	113366282	113366354	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	2	-2.7278
chr2	4222030	4222052	protein_coding	Frmd4a	utr5	ENSMUSG00000026657	ProperStrand	44	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-9.5502
chr11	62366457	62366520	protein_coding	Ubb	exon	ENSMUSG00000019505	ProperStrand	32	chr3	108228259	108228275	protein_coding	Sars	utr3	ENSMUSG00000068739	NonProperStrand	200	1	-12.1684
chr11	114533144	114533169	protein_coding	Rpl38	exon	ENSMUSG00000057322	ProperStrand	29	chr14	31827478	31827548	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-8.4017
chr8	122477166	122478737	protein_coding	Usp10	exon	ENSMUSG00000031826	ProperStrand	98	chr19	8800085	8800110	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-6.6337
chr9	74919397	74964013	protein_coding	Myo5a	utr5	ENSMUSG00000034593	ProperStrand	89	chr2	26494747	26494827	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	38	-22.5679
chr14	117827245	117827264	protein_coding	Gpc6	intron	ENSMUSG00000058571	ProperStrand	28	chr16	23110464	23110564	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-9.4942
chr13	21414719	21414752	miRNA	AC124460.1	.	ENSMUSG00000093647	ProperStrand	23	chr16	23110828	23110906	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.7108
chr14	14208652	14208732	protein_coding	Synpr	intron	ENSMUSG00000056296	ProperStrand	4	chr11	59950485	59950575	protein_coding	Rai1	intron	ENSMUSG00000062115	ProperStrand	25	1	-19.1451
chr12	109460710	109460726	protein_coding	Ccdc85c	intron	ENSMUSG00000084883	ProperStrand	157	chr5	108336363	108336487	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-3.0836
chr2	162909275	162909315	protein_coding	Mybl2	utr3	ENSMUSG00000017861	ProperStrand	230	chr2	26203131	26203147	protein_coding	Gpsm1	utr3	ENSMUSG00000026930	ProperStrand	93	2	-15.3511
chr19	5801801	5801891	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr3	102861438	102861480	protein_coding	Csde1	utr3	ENSMUSG00000068823	ProperStrand	122	1	-6.1393
chr2	24825186	24827046	protein_coding	Wdr85	exon	ENSMUSG00000026975	ProperStrand	323	chr9	67679147	67679164	protein_coding	C2cd4a	exon	ENSMUSG00000047990	ProperStrand	3	2	-inf
chr1	53409486	53409502	protein_coding	Asnsd1	utr5	ENSMUSG00000026095	NonProperStrand	105	chr19	8963062	8963083	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.4033
chr16	13836565	13836638	protein_coding	Pdxdc1	exon	ENSMUSG00000022680	ProperStrand	26	chr11	97642999	97643089	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-6.7423
chr8	35936088	35936199	protein_coding	Tnks	exon	ENSMUSG00000031529	ProperStrand	37	chr17	24857794	24857815	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.1418
chr7	127785229	127786619	protein_coding	Uqcrc2	exon	ENSMUSG00000030884	ProperStrand	26	chr19	8798740	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-6.4454
chr5	37482626	37482642	protein_coding	Jakmip1	exon	ENSMUSG00000063646	NonProperStrand	7	chr9	64022855	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-12.4435
chr7	19787792	19787871	protein_coding	Eml2	intron	ENSMUSG00000040811	ProperStrand	33	chr11	97642982	97643072	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.5405
chr4	151611822	151627282	protein_coding	Acot7	exon	ENSMUSG00000028937	ProperStrand	15	chr9	15118324	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-10.0759
chr16	35490285	35490351	protein_coding	Pdia5	intron	ENSMUSG00000022844	ProperStrand	26	chr4	131908357	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.7765
chr4	147996119	147996217	protein_coding	Tardbp	exon	ENSMUSG00000041459	ProperStrand	120	chr5	115721646	115721674	protein_coding	Rnf10	intron	ENSMUSG00000041740	ProperStrand	95	6	-19.9577
chr3	142351262	142351281	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr2	179762709	179766134	protein_coding	Lsm14b	exon	ENSMUSG00000039108	ProperStrand	26	1	-9.4790
chr16	37777391	37777408	protein_coding	Fstl1	exon	ENSMUSG00000022816	ProperStrand	179	chr10	110918547	110918660	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-1.6020
chr4	147988651	147988668	protein_coding	Tardbp	utr3	ENSMUSG00000041459	ProperStrand	120	chr12	112779147	112779205	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-3.4709
chr11	109827453	109827471	protein_coding	Abca8b	intron	ENSMUSG00000020620	ProperStrand	8	chr11	106362640	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-11.5300
chr12	110888393	110888497	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr2	145076805	145209255	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	2	-5.5503
chr14	57961997	57962017	protein_coding	Cryl1	intron	ENSMUSG00000021947	ProperStrand	9	chr1	162965980	162966018	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-11.9671
chr2	69305169	69305221	protein_coding	Lrp2	exon	ENSMUSG00000027070	ProperStrand	35	chr10	23505195	23505285	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-3.7108
chr11	58439391	58439407	protein_coding	Olfr323	exon	ENSMUSG00000043880	ProperStrand	7	chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-12.1558
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr2	26235719	26235737	protein_coding	Snapc4	intron	ENSMUSG00000036281	ProperStrand	19	1	-10.1190
chr4	131908409	131908463	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr5	142460780	142460796	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	1	-4.6312
chr14	52794932	52795016	protein_coding	Supt16h	exon	ENSMUSG00000035726	ProperStrand	193	chr16	23110551	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-2.6179
chr1	74825809	74825893	protein_coding	Wnt6	intron	ENSMUSG00000033227	ProperStrand	16	chr16	43886794	43886849	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	8	-19.6403
chr13	107682584	107697906	protein_coding	Ipo11	intron	ENSMUSG00000042590	ProperStrand	120	chr16	23110454	23110570	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-2.5984
chr11	98856642	98857198	protein_coding	Top2a	exon	ENSMUSG00000020914	ProperStrand	324	chrX	137636914	137636931	protein_coding	Col4a6	exon	ENSMUSG00000031273	ProperStrand	8	3	-20.4907
chr15	98686269	98686538	protein_coding	Mll2	exon	ENSMUSG00000048154	ProperStrand	170	chr7	134671418	134671498	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-5.8122
chr9	78215628	78215799	protein_coding	Dppa5a	exon	ENSMUSG00000060461	ProperStrand	79	chr7	117166740	117166820	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-4.2897
chr10	50319371	50319387	protein_coding	Ascc3	intron	ENSMUSG00000038774	ProperStrand	10	chr9	120039545	120039682	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-6.8270
chr17	46861595	46861611	protein_coding	Pex6	exon	ENSMUSG00000002763	ProperStrand	292	chr11	72254947	72254989	protein_coding	Mybbp1a	exon	ENSMUSG00000040463	ProperStrand	279	1	-7.0766
chr9	78023109	78023148	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr5	24071555	24071655	protein_coding	Abcf2	utr3	ENSMUSG00000028953	ProperStrand	50	1	-6.2373
chr12	103180370	103180409	protein_coding	Atxn3	exon	ENSMUSG00000021189	ProperStrand	20	chr11	62418054	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-7.7485
chr9	44189948	44189965	protein_coding	Hyou1	exon	ENSMUSG00000032115	NonProperStrand	1	chr7	116664819	116664909	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-inf
chr4	123150220	123150293	protein_coding	Macf1	exon	ENSMUSG00000028649	ProperStrand	320	chr14	93575981	93575998	protein_coding	Pcdh9	intron	ENSMUSG00000055421	ProperStrand	59	1	-9.9926
chr11	104396091	104396135	protein_coding	Cdc27	exon	ENSMUSG00000020687	ProperStrand	24	chr15	98350146	98350183	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	2	-10.6499
chr2	181450622	181451208	protein_coding	Oprl1	exon	ENSMUSG00000027584	ProperStrand	32	chr4	131866159	131866292	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-4.8615
chr9	40612003	40612266	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr3	82816758	82816774	protein_coding	Fgg	exon	ENSMUSG00000033860	NonProperStrand	321	2	-7.9886
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr7	118219574	118219661	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	4	-1.7110
chr2	126967380	126967401	protein_coding	Itpripl1	exon	ENSMUSG00000074825	ProperStrand	22	chr12	92811910	92812013	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	1	-10.5991
chr2	155214471	155214489	protein_coding	Trp53inp2	utr3	ENSMUSG00000038375	ProperStrand	12	chr17	35088957	35088976	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	3	-19.4480
chr7	120395231	120395276	protein_coding	Arntl	intron	ENSMUSG00000055116	ProperStrand	14	chr3	68889161	68889185	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-6.0690
chr1	134212897	134212914	protein_coding	Nuak2	exon	ENSMUSG00000009772	NonProperStrand	19	chr8	108410057	108410080	protein_coding	Edc4	exon	ENSMUSG00000036270	ProperStrand	34	1	-16.7556
chr18	25780123	25780140	protein_coding	Celf4	intron	ENSMUSG00000024268	ProperStrand	21	chr19	8963027	8963082	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.1775
chr5	147647230	147647519	protein_coding	Rpl21	exon	ENSMUSG00000041453	ProperStrand	112	chr7	116664841	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	6	-10.4652
chr15	99470084	99470144	protein_coding	Racgap1	exon	ENSMUSG00000023015	ProperStrand	47	chr12	81537464	81537481	protein_coding	Dcaf5	utr5	ENSMUSG00000049106	ProperStrand	23	3	-19.9865
chr18	24746627	24746727	protein_coding	Slc39a6	intron	ENSMUSG00000024270	ProperStrand	16	chr16	20682861	20683510	protein_coding	Eif4g1	exon	ENSMUSG00000045983	ProperStrand	199	1	-13.5962
chr11	100414998	100415014	protein_coding	Ttc25	exon	ENSMUSG00000006784	NonProperStrand	119	chr17	35151636	35151698	protein_coding	Vars	exon	ENSMUSG00000007029	ProperStrand	121	1	-10.5296
chr17	12912715	12912761	protein_coding	Igf2r	exon	ENSMUSG00000023830	ProperStrand	151	chr19	59534008	59534026	protein_coding	Emx2	exon	ENSMUSG00000043969	NonProperStrand	87	1	-10.7140
chr11	3649570	3649587	protein_coding	Osbp2	intron	ENSMUSG00000020435	ProperStrand	60	chr11	77995195	77995255	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-6.1827
chr7	52378297	52378582	protein_coding	Rps11	exon	ENSMUSG00000003429	ProperStrand	49	chr7	118219575	118219630	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-4.5566
chr4	155092124	155092140	protein_coding	Ssu72	intron	ENSMUSG00000029038	ProperStrand	7	chr4	131908809	131908881	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.0493
chr9	39358287	39358304	protein_coding	Olfr958	exon	ENSMUSG00000050853	NonProperStrand	266	chr2	144087414	144087462	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	2	-6.2163
chr4	76614453	76614470	protein_coding	Ptprd	intron	ENSMUSG00000028399	ProperStrand	198	chr17	35089183	35089232	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-3.2283
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr9	48707950	48707967	protein_coding	Htr3a	exon	ENSMUSG00000032269	NonProperStrand	20	1	-13.5998
chr5	149142323	149142413	protein_coding	Slc7a1	utr3	ENSMUSG00000041313	ProperStrand	65	chr18	35716787	35716867	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.0388
chr7	79633894	79633984	LINE	L1Md_T	L1	chr7L1Md_T79627950	ProperStrand	1	chr1	12658158	12658248	lincRNA	Gm17644	exon	ENSMUSG00000066918	NonProperStrand	37	1	-inf
chr9	59513062	59526692	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr11	69481334	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	8	-1.3655
chr8	46035864	46109125	protein_coding	Fat1	exon	ENSMUSG00000070047	ProperStrand	306	chr16	23111389	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	9	-3.0828
chr12	32603618	32603634	protein_coding	Cog5	intron	ENSMUSG00000035933	ProperStrand	16	chr2	146125209	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	1	-13.7564
chr10	59758701	59761852	protein_coding	Psap	exon	ENSMUSG00000004207	ProperStrand	124	chr15	85619414	85619430	protein_coding	Ppara	exon	ENSMUSG00000022383	ProperStrand	2	1	-inf
chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr12	92811869	92811932	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	3	-8.2149
chr5	39064686	39064732	protein_coding	Zfp518b	exon	ENSMUSG00000046572	ProperStrand	95	chr4	131908689	131908822	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-4.8809
chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr1	87983864	87983963	snoRNA	ENSMUSG00000077274_SNORA26	.	ENSMUSG00000077274	ProperStrand	361	2	-1.1933
chr2	150804808	150804878	protein_coding	Ninl	intron	ENSMUSG00000068115	ProperStrand	51	chr7	116664794	116664884	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.8322
chr6	120883983	120884027	protein_coding	Mical3	utr3	ENSMUSG00000051586	ProperStrand	104	chr2	79843543	79843559	protein_coding	Pde1a	intron	ENSMUSG00000059173	NonProperStrand	275	1	-9.1586
chr2	180669598	180669615	protein_coding	Nkain4	utr3	ENSMUSG00000027574	NonProperStrand	2	chr11	77996560	77996609	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-13.5262
chr2	152142343	152142425	protein_coding	Rbck1	utr3	ENSMUSG00000027466	ProperStrand	30	chr4	131865395	131865485	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-5.3377
chr13	58278180	58278217	protein_coding	Ubqln1	utr3	ENSMUSG00000005312	ProperStrand	49	chr11	101616150	101616184	protein_coding	Dhx8	exon	ENSMUSG00000034931	ProperStrand	48	1	-14.1723
chr2	32563527	32563545	protein_coding	Cdk9	exon	ENSMUSG00000009555	NonProperStrand	49	chr7	31320001	31320019	protein_coding	Arhgap33	exon	ENSMUSG00000036882	ProperStrand	12	1	-17.1341
chr7	125868066	125868095	protein_coding	6330503K22Rik	exon	ENSMUSG00000033904	ProperStrand	25	chr8	98269959	98270047	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-7.2809
mmu-miR-6238	3	20	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chrX	34622906	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	5	-6.1616
chr14	20451772	20451789	LTR	IAPLTR3-int	ERVK	chr14IAPLTR3-int20447903	ProperStrand	44	chr1	162966813	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-6.8741
chr3	12247906	12247996	LINE	Lx3B	L1	chr3Lx3B12247786	ProperStrand	1	chr14	98391860	98391940	protein_coding	Dach1	intron	ENSMUSG00000055639	NonProperStrand	7	1	-inf
chr17	36097663	36097764	protein_coding	Abcf1	exon	ENSMUSG00000038762	ProperStrand	206	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-6.4743
chr7	117166720	117166744	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr4	131826027	131826117	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	1	-2.3896
chr2	32990264	33101654	protein_coding	Ralgps1	utr3	ENSMUSG00000038831	ProperStrand	75	chr7	29136525	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	4	-7.6301
chr8	13416897	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr2	166890502	166890560	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-1.2925
chr19	3630135	3630229	protein_coding	Lrp5	exon	ENSMUSG00000024913	ProperStrand	145	chr7	52381763	52381799	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-5.8302
chr2	152655233	152655298	protein_coding	Bcl2l1	exon	ENSMUSG00000007659	ProperStrand	9	chr11	97642952	97643016	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-14.4836
chr9	46010451	46010530	protein_coding	Sik3	utr3	ENSMUSG00000034135	ProperStrand	49	chr9	15119683	15119721	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-7.6579
chr4	154964516	154964606	protein_coding	Nadk	utr3	ENSMUSG00000029063	ProperStrand	25	chr5	74489595	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-5.4637
chr2	179936637	179936654	protein_coding	Lama5	intron	ENSMUSG00000015647	ProperStrand	365	chr12	21396654	21396714	protein_coding	Ywhaq	utr3	ENSMUSG00000076432	ProperStrand	70	1	-9.3869
chr11	117631790	117632023	protein_coding	Tmc6	exon	ENSMUSG00000025572	ProperStrand	60	chr7	29136633	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	6	-13.9383
chr1	121312590	121312608	protein_coding	Inhbb	utr3	ENSMUSG00000037035	ProperStrand	10	chr7	29136525	29136630	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.7572
chr14	99468884	99468974	protein_coding	6720463M24Rik	intron	ENSMUSG00000022070	ProperStrand	23	chr15	79908938	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-7.3789
chr7	3333272	3336569	protein_coding	Cacng7	intron	ENSMUSG00000069806	ProperStrand	29	chr16	23110828	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.1645
chr16	38158083	38158156	protein_coding	Gsk3b	intron	ENSMUSG00000022812	ProperStrand	80	chr16	23111694	23111784	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.4655
chr17	36047753	36047769	protein_coding	Mrps18b	exon	ENSMUSG00000024436	ProperStrand	21	chr2	154889619	154889771	protein_coding	Ahcy	exon	ENSMUSG00000027597	ProperStrand	18	1	-17.8447
chr4	116371854	116371887	protein_coding	Prdx1	utr3	ENSMUSG00000028691	ProperStrand	41	chr7	52382251	52382314	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-9.0481
chr7	52381542	52381602	protein_coding	Rpl13a	exon	ENSMUSG00000074129	ProperStrand	269	chr18	35716850	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-0.7323
chr19	41922288	41922306	protein_coding	Frat2	exon	ENSMUSG00000047604	ProperStrand	2	chr6	115757990	115758048	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-12.8899
chr14	21502607	21502645	protein_coding	Sec24c	exon	ENSMUSG00000039367	ProperStrand	60	chr5	113370707	113370723	protein_coding	Adrbk2	exon	ENSMUSG00000042249	ProperStrand	56	1	-13.4531
chr2	57090809	57090827	protein_coding	Gpd2	utr5	ENSMUSG00000026827	ProperStrand	93	chr8	91556237	91556273	protein_coding	Sall1	exon	ENSMUSG00000031665	ProperStrand	96	1	-11.4880
chr5	147647265	147647287	protein_coding	Rpl21	exon	ENSMUSG00000041453	ProperStrand	112	chr3	89750435	89750451	protein_coding	Atp8b2	exon	ENSMUSG00000060671	ProperStrand	140	1	-10.3590
chr2	91439518	91440858	protein_coding	Ckap5	exon	ENSMUSG00000040549	ProperStrand	53	chr10	23506278	23506346	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-7.1943
chr15	36530735	36531132	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr9	15119344	15119424	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	11	-15.0040
chr1	116096961	116097041	LTR	RMER10B	ERVL	chr1RMER10B116096950	ProperStrand	1	chr1	116096856	116096946	LTR	RMER17C-int	ERVK	chr1RMER17C-int116096716	NonProperStrand	1	1	-inf
chr19	57685452	57685475	Low_complexity	GC_rich	Low_complexity	chr19GC_rich57685453	ProperStrand	13	chr9	15118245	15118321	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	3	-15.0154
chr6	119898288	119898352	protein_coding	Wnk1	exon	ENSMUSG00000045962	ProperStrand	221	chr5	116011389	116011489	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	1	-7.5447
chr10	126953650	126953683	protein_coding	Ndufa4l2	utr3	ENSMUSG00000040280	ProperStrand	18	chr18	35102298	35102352	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-9.0132
chr7	147233668	147233685	protein_coding	Msx3	utr3	ENSMUSG00000025469	NonProperStrand	3	chr2	158451026	158451043	protein_coding	Actr5	exon	ENSMUSG00000037761	NonProperStrand	94	1	-18.3984
chr2	26493385	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr11	68886973	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	8	-1.4066
chrX	101154574	101154608	protein_coding	Rlim	utr3	ENSMUSG00000056537	ProperStrand	38	chr15	34370545	34370664	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-4.4093
chr3	88603873	88603937	pseudogene	5830417I10Rik	.	ENSMUSG00000078684	ProperStrand	68	chr12	88778711	88778766	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-6.2504
chr2	179322380	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr9	15130707	15130757	snoRNA	ENSMUSG00000077506_Scarna9	.	ENSMUSG00000077506	ProperStrand	148	1	-9.4013
chr1	135516898	135516914	protein_coding	Zc3h11a	utr3	ENSMUSG00000026464	ProperStrand	102	chr9	64022855	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-6.9693
chr5	123252882	123256322	protein_coding	Anapc5	exon	ENSMUSG00000029472	ProperStrand	92	chr9	64143809	64143873	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-6.9220
chr19	5798714	5798804	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr7	16524139	16524219	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	1	-4.0511
chr6	94776856	94776876	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-1.4896
chr3	103158141	103158203	protein_coding	Trim33	utr3	ENSMUSG00000033014	ProperStrand	55	chr10	23505149	23505231	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	6	-9.7910
chr19	38869531	38869547	protein_coding	Noc3l	exon	ENSMUSG00000024999	NonProperStrand	149	chr7	13516173	13516196	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	1	-6.8557
chr13	8803737	8803798	protein_coding	Wdr37	utr3	ENSMUSG00000021147	ProperStrand	8	chr5	74489640	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-7.7916
chr8	129895529	129895593	protein_coding	Pard3	exon	ENSMUSG00000025812	ProperStrand	44	chr6	123089131	123089269	protein_coding	Clec4a2	exon	ENSMUSG00000030148	ProperStrand	44	1	-14.5772
chr2	13504201	13504238	protein_coding	Vim	utr3	ENSMUSG00000026728	ProperStrand	33	chr16	23111473	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.1725
chr9	56107183	56107266	protein_coding	C230081A13Rik	exon	ENSMUSG00000074305	ProperStrand	40	chr19	8800376	8800466	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-4.2913
chr2	180749524	180749540	protein_coding	Col20a1	exon	ENSMUSG00000016356	ProperStrand	17	chr14	56159296	56159312	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	1	-13.5052
chr19	5905512	5906573	protein_coding	Dpf2	exon	ENSMUSG00000024826	ProperStrand	38	chr4	122968584	122968664	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-7.1889
chr19	17403744	17403808	protein_coding	Gcnt1	exon	ENSMUSG00000038843	ProperStrand	11	chrX	34622933	34623023	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-10.5919
chr14	68332766	68332808	protein_coding	Cdca2	exon	ENSMUSG00000048922	ProperStrand	50	chr5	136384854	136384954	protein_coding	Ywhag	utr3	ENSMUSG00000051391	ProperStrand	142	1	-11.9516
chr19	3717233	3717249	protein_coding	1810055G02Rik	exon	ENSMUSG00000035372	ProperStrand	5	chr7	117190041	117190062	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-8.3295
chr7	135115491	135115705	protein_coding	Fus	exon	ENSMUSG00000030795	ProperStrand	162	chr13	104063035	104063125	protein_coding	Mast4	intron	ENSMUSG00000034751	ProperStrand	150	1	-9.4826
chr2	6844231	6844249	protein_coding	Celf2	intron	ENSMUSG00000002107	NonProperStrand	26	chr10	110918581	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-5.0402
chr6	54379743	54379760	lincRNA	9130019P16Rik	exon	ENSMUSG00000073067	ProperStrand	255	chr12	17552960	17552994	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-2.4279
chr13	93273912	93274012	protein_coding	Zfyve16	exon	ENSMUSG00000021706	ProperStrand	14	chr16	23110831	23110875	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-11.4341
chrX	120217486	120217503	protein_coding	3110007F17Rik	intron	ENSMUSG00000079450	NonProperStrand	18	chr8	73419649	73419729	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-5.4264
chr16	94495979	94495997	protein_coding	Hlcs	intron	ENSMUSG00000040820	ProperStrand	22	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-10.9562
chr5	104304863	104304908	protein_coding	Klhl8	exon	ENSMUSG00000029312	ProperStrand	7	chr17	24857815	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	5	-20.9455
chr2	130101987	130102031	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	NonProperStrand	12	chr8	129468780	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	NonProperStrand	22	1	-19.0611
chr10	56095211	56095291	SINE	PB1D9	Alu	chr10PB1D956095202	NonProperStrand	1	chr4	134475494	134475584	SINE	B1_Mur4	Alu	chr4B1_Mur4134475493	ProperStrand	1	1	-inf
chr8	40681587	40681603	protein_coding	Msr1	intron	ENSMUSG00000025044	ProperStrand	138	chr4	154917152	154917172	protein_coding	Gnb1	exon	ENSMUSG00000029064	ProperStrand	69	1	-11.3606
chr16	16890279	16890297	protein_coding	Top3b	exon	ENSMUSG00000022779	NonProperStrand	5	chr16	23110512	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-7.3464
chr8	3803254	3803344	misc_RNA	RNaseP_nuc	.	ENSMUSG00000088025	ProperStrand	328	chr1	194571788	194571854	snRNA	ENSMUSG00000064881_U5	.	ENSMUSG00000064881	ProperStrand	187	1	-7.6388
chr11	102700777	102700850	protein_coding	Eftud2	exon	ENSMUSG00000020929	ProperStrand	86	chr9	44551085	44551185	protein_coding	Arcn1	utr3	ENSMUSG00000032096	ProperStrand	35	1	-13.6844
chr6	122679070	122679144	protein_coding	Slc2a3	utr3	ENSMUSG00000003153	ProperStrand	682	chr3	95980320	95980410	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-2.2971
chr3	54533532	54533615	protein_coding	Exosc8	intron	ENSMUSG00000027752	ProperStrand	8	chr1	162965551	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-7.2483
chr10	88209729	88209793	protein_coding	Utp20	exon	ENSMUSG00000004356	ProperStrand	45	chr8	86504287	86504368	protein_coding	Prkaca	intron	ENSMUSG00000005469	ProperStrand	17	3	-20.3951
chr1	59539516	59539562	protein_coding	Fzd7	utr5	ENSMUSG00000041075	ProperStrand	373	chr11	97641452	97641487	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	3	-10.2851
chr10	21326942	21326960	protein_coding	1700020N01Rik	intron	ENSMUSG00000050844	NonProperStrand	3	chr11	62418040	62418079	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-11.8803
chr7	52714975	52715104	protein_coding	Ftl1	utr5	ENSMUSG00000050708	ProperStrand	807	chr12	106269290	106269380	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	2	-0.7443
chr7	53089954	53089976	protein_coding	Grin2d	intron	ENSMUSG00000002771	NonProperStrand	31	chr14	76956323	76956339	protein_coding	Serp2	utr5	ENSMUSG00000052584	NonProperStrand	41	1	-15.4211
chr15	98428804	98428820	protein_coding	Adcy6	exon	ENSMUSG00000022994	ProperStrand	50	chr10	110918582	110918634	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-6.4047
chr11	48613986	48619134	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	chr10	23505152	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	6	-0.8508
chr4	43505658	43505699	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr10	128070910	128071007	protein_coding	Ikzf4	utr3	ENSMUSG00000002578	ProperStrand	2	1	-10.3311
chr7	28610661	28610741	LINE	Lx5	L1	chr7Lx528610031	ProperStrand	1	chr7	28610795	28610885	LINE	Lx5	L1	chr7Lx528610726	ProperStrand	1	1	-inf
chr11	98878388	98878468	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	chr3	95980321	95980411	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-0.7456
chr9	41797527	41797549	protein_coding	Sorl1	exon	ENSMUSG00000049313	ProperStrand	112	chr11	97642952	97643082	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-2.7749
chr4	118108222	118108387	protein_coding	Cdc20	exon	ENSMUSG00000006398	ProperStrand	43	chr7	116663648	116663713	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.0984
chr17	75578474	75690739	protein_coding	Ltbp1	exon	ENSMUSG00000001870	ProperStrand	136	chr4	131865855	131865917	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.4325
chr5	109124122	109132306	protein_coding	Fgfrl1	exon	ENSMUSG00000008090	ProperStrand	111	chr8	107821768	107822235	protein_coding	E2f4	exon	ENSMUSG00000014859	ProperStrand	32	1	-13.3490
chr7	133695551	133695624	protein_coding	Eif3c	exon	ENSMUSG00000030738	ProperStrand	92	chr16	23111762	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-2.4307
chr11	69483136	69483263	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	chr13	96100553	96100693	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	7	-1.0137
chr5	5672842	5672926	protein_coding	Steap2	utr3	ENSMUSG00000015653	ProperStrand	17	chr2	145077959	145209256	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	3	-21.0512
chr7	26507347	26507829	protein_coding	Hnrnpul1	exon	ENSMUSG00000040725	ProperStrand	84	chr11	97489600	97489617	protein_coding	E130012A19Rik	exon	ENSMUSG00000043439	NonProperStrand	110	1	-11.4200
chr9	78023113	78023248	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr1	32601051	32601067	protein_coding	Khdrbs2	intron	ENSMUSG00000026058	ProperStrand	10	1	-9.5070
chr5	34086412	34087742	protein_coding	Letm1	exon	ENSMUSG00000005299	ProperStrand	21	chr9	63868722	63868739	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	1	-10.7098
chr7	147190714	147193833	protein_coding	Tubgcp2	exon	ENSMUSG00000025474	ProperStrand	10	chr16	23111452	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-14.7563
chr16	31445853	31445913	protein_coding	Bdh1	intron	ENSMUSG00000046598	ProperStrand	17	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-10.2914
chr4	118966810	118966900	protein_coding	Ybx1	exon	ENSMUSG00000028639	ProperStrand	171	chr10	80641693	80641716	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	3	-12.7338
chr4	57706987	57707003	protein_coding	Palm2	intron	ENSMUSG00000090053	NonProperStrand	187	chr17	35088957	35089021	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-3.6911
chr5	121658860	121658909	protein_coding	Rpl6	exon	ENSMUSG00000029614	ProperStrand	332	chr4	131865400	131865490	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	5	-6.7928
chr8	125418803	125418819	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	chr7	52381972	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-3.1830
chr16	20652797	20654687	protein_coding	Psmd2	exon	ENSMUSG00000006998	ProperStrand	99	chr1	88247769	88247804	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-4.1382
chr1	71633500	71636759	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr13	51743684	51743703	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	5	-9.1253
chr9	78023109	78023195	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr1	16092829	16092864	protein_coding	Rpl7	exon	ENSMUSG00000043716	ProperStrand	93	1	-5.0234
chr4	136332232	136332250	protein_coding	Ephb2	intron	ENSMUSG00000028664	ProperStrand	21	chr11	97643019	97643060	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.3990
chr4	111400727	111400754	protein_coding	Spata6	intron	ENSMUSG00000034401	ProperStrand	16	chr7	148634776	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-10.7040
chr6	88052069	88052159	protein_coding	Rpn1	exon	ENSMUSG00000030062	ProperStrand	58	chr10	39978342	39978422	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	2	-9.0441
chr19	21892442	21910022	protein_coding	Tmem2	exon	ENSMUSG00000024754	ProperStrand	133	chr11	69483136	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	5	-7.0900
chr3	88899542	88899558	protein_coding	Fdps	exon	ENSMUSG00000059743	NonProperStrand	17	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.9909
chr8	113680380	113680460	protein_coding	Glg1	utr3	ENSMUSG00000003316	ProperStrand	83	chr8	98269984	98270074	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-4.9111
chr15	100311922	100311938	protein_coding	Csrnp2	utr3	ENSMUSG00000044636	NonProperStrand	60	chr6	115758042	115758077	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-5.4720
chr6	72560685	72560785	protein_coding	Tgoln1	utr3	ENSMUSG00000056429	ProperStrand	8	chr9	15119733	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-10.7456
mmu-miR-7033-5p	2	19	miRNA	mmu-miR-7033-5p	.	mmu-miR-7033-5p	ProperStrand	25	chr1	89681129	89681239	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-7.1784
chr1	75484537	75484553	protein_coding	Obsl1	exon	ENSMUSG00000026211	NonProperStrand	192	chr7	120438981	120439030	protein_coding	Arntl	exon	ENSMUSG00000055116	ProperStrand	14	1	-13.9508
chr11	97489600	97489617	protein_coding	E130012A19Rik	exon	ENSMUSG00000043439	NonProperStrand	110	chr1	162966185	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-6.3741
chr9	21483586	21490476	protein_coding	Smarca4	exon	ENSMUSG00000032187	ProperStrand	196	chr9	78327834	78327892	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-4.0466
chr13	19459681	19462122	protein_coding	Stard3nl	exon	ENSMUSG00000003062	ProperStrand	8	chr16	33947905	33947921	protein_coding	Itgb5	exon	ENSMUSG00000022817	NonProperStrand	17	1	-19.2278
chr17	45706550	45706609	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr1	39605591	39605655	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-1.3373
chr9	114626696	114626786	protein_coding	Dync1li1	intron	ENSMUSG00000032435	ProperStrand	33	chr2	26493369	26493449	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-4.8821
chr3	90079976	90080066	protein_coding	Dennd4b	intron	ENSMUSG00000042404	ProperStrand	13	chr12	88778635	88778725	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-9.5904
chrX	12747632	12747732	protein_coding	Usp9x	utr3	ENSMUSG00000031010	ProperStrand	174	chr1	24621518	24621560	protein_coding	Gm10925	utr5	ENSMUSG00000090378	ProperStrand	320	1	-7.8309
chr17	32453268	32453285	protein_coding	Akap8	exon	ENSMUSG00000024045	ProperStrand	339	chr11	74718940	74719010	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	3	-12.9593
chr11	117006186	117006216	protein_coding	Sec14l1	exon	ENSMUSG00000020823	ProperStrand	71	chr17	45701936	45701984	protein_coding	Slc35b2	exon	ENSMUSG00000037089	ProperStrand	55	1	-13.1508
chr9	102622480	102622570	protein_coding	Amotl2	exon	ENSMUSG00000032531	ProperStrand	54	chr13	49779690	49779770	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-7.2232
chr17	28023311	28023327	protein_coding	Uhrf1bp1	exon	ENSMUSG00000039512	NonProperStrand	14	chr7	116664853	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-5.2856
chr11	119142372	119142426	protein_coding	Gaa	intron	ENSMUSG00000025579	ProperStrand	149	chr1	164463835	164463915	protein_coding	Mettl13	utr3	ENSMUSG00000026694	ProperStrand	26	1	-13.1813
chr9	53430905	53430949	protein_coding	Cul5	exon	ENSMUSG00000032030	ProperStrand	87	chr14	33005146	33005236	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	2	-5.6548
chr10	86153704	86153756	protein_coding	Hsp90b1	utr3	ENSMUSG00000020048	ProperStrand	396	chr5	118376503	118376519	protein_coding	Nos1	exon	ENSMUSG00000029361	NonProperStrand	237	1	-6.7975
chr5	27777809	27795954	protein_coding	Dpp6	exon	ENSMUSG00000061576	NonProperStrand	32	chr8	113362456	113362512	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	2	-16.5808
chr1	143485409	143485426	LINE	Lx8	L1	chr1Lx8143485408	ProperStrand	1	chr9	120038615	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-inf
chr4	140602315	140602382	protein_coding	Crocc	exon	ENSMUSG00000040860	ProperStrand	44	chr5	73563222	73563238	protein_coding	Fryl	intron	ENSMUSG00000070733	ProperStrand	173	1	-11.8149
chr3	65762111	65762128	protein_coding	Ccnl1	utr5	ENSMUSG00000027829	ProperStrand	29	chr7	51503523	51503549	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	1	-10.0809
chr17	57374578	57374595	protein_coding	Gpr108	utr3	ENSMUSG00000005823	ProperStrand	15	chr11	69481388	69481433	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.8683
chr2	90235304	90235341	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	88077192	88077244	protein_coding	Dnaja2	exon	ENSMUSG00000031701	ProperStrand	39	1	-5.2962
chr9	120039534	120039627	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	chr5	92485117	92485219	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	3	-1.0844
chr1	77503191	77503212	protein_coding	Epha4	exon	ENSMUSG00000026235	ProperStrand	57	chr2	83693562	83693578	protein_coding	Fam171b	exon	ENSMUSG00000048388	NonProperStrand	175	1	-11.2687
chr11	96803837	96805049	protein_coding	Pnpo	exon	ENSMUSG00000018659	ProperStrand	7	chr1	63225041	63225103	protein_coding	Eef1b2	exon	ENSMUSG00000025967	ProperStrand	106	1	-16.5332
chr4	133164437	133164537	protein_coding	Zdhhc18	utr3	ENSMUSG00000037553	ProperStrand	51	chr7	150717298	150717348	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-5.8255
chr19	10116351	10116367	protein_coding	Fads3	exon	ENSMUSG00000024664	NonProperStrand	16	chr4	131865921	131865977	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.1079
chr8	108379758	108379858	protein_coding	Thap11	exon	ENSMUSG00000036442	ProperStrand	34	chr2	44607629	44607673	protein_coding	Gtdc1	exon	ENSMUSG00000036890	ProperStrand	22	2	-19.7319
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr6	111396936	111396952	protein_coding	Grm7	intron	ENSMUSG00000056755	NonProperStrand	19	1	-10.1190
chr5	110860235	110860269	protein_coding	Fbrsl1	intron	ENSMUSG00000043323	ProperStrand	131	chr19	40793333	40793353	protein_coding	Entpd1	intron	ENSMUSG00000048120	ProperStrand	5	1	-16.8612
chr2	90235315	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	163268043	163268061	protein_coding	Gdap1l1	intron	ENSMUSG00000017943	NonProperStrand	30	1	-5.8128
chr11	69554555	69554671	protein_coding	Polr2a	exon	ENSMUSG00000005198	ProperStrand	200	chr4	66045089	66045105	protein_coding	Astn2	intron	ENSMUSG00000028373	ProperStrand	18	1	-13.3412
chr9	35723208	35723298	LINE	Lx3_Mus	L1	chr9Lx3_Mus35722716	ProperStrand	1	chr16	93898119	93898199	protein_coding	Chaf1b	intron	ENSMUSG00000022945	ProperStrand	28	1	-inf
chr2	28544927	28544977	protein_coding	Tsc1	utr3	ENSMUSG00000026812	ProperStrand	29	chr4	131908257	131908347	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.5844
chr6	3794656	3794673	SINE	B4A	B4	chr6B4A3794525	NonProperStrand	26	chr17	8720218	8720234	protein_coding	Pde10a	intron	ENSMUSG00000023868	ProperStrand	25	1	-16.7139
chr12	110311169	110311259	Low_complexity	GA-rich	Low_complexity	chr12GA-rich110311116	ProperStrand	1	chr12	110311004	110311084	SINE	B4A	B4	chr12B4A110310870	ProperStrand	1	1	-inf
chr11	106640634	106640671	protein_coding	Polg2	exon	ENSMUSG00000020718	ProperStrand	12	chr4	131865856	131865946	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.6729
chr15	99239163	99239196	protein_coding	Tmbim6	utr3	ENSMUSG00000023010	ProperStrand	64	chr7	29136526	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.2567
chr11	68603801	68603820	protein_coding	Myh10	intron	ENSMUSG00000020900	ProperStrand	91	chr7	116663633	116663710	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.8277
chr5	123997135	124008636	protein_coding	Vps33a	exon	ENSMUSG00000029434	ProperStrand	16	chr7	4691731	4691749	protein_coding	Suv420h2	utr5	ENSMUSG00000059851	NonProperStrand	70	1	-15.6894
chr6	9143934	9144014	protein_coding	Nxph1	intron	ENSMUSG00000046178	ProperStrand	16	chr7	54441643	54441733	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	1	-14.2803
chr5	130295460	130295550	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	chr1	87983916	87983996	snoRNA	ENSMUSG00000077274_SNORA26	.	ENSMUSG00000077274	ProperStrand	361	1	-1.9919
chr3	105762609	105762919	protein_coding	Wdr77	exon	ENSMUSG00000000561	ProperStrand	15	chr16	23110933	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-3.8284
chr3	97817679	97851652	protein_coding	Notch2	exon	ENSMUSG00000027878	ProperStrand	86	chr10	110918592	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-2.8017
chr15	99869238	99869254	protein_coding	Dip2b	utr5	ENSMUSG00000023026	ProperStrand	48	chr1	72871217	72871268	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	1	-9.9327
chr4	79648781	79648875	pseudogene	Gm11407	.	ENSMUSG00000082179	NonProperStrand	20	chr7	117189944	117190045	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	8	-21.1178
chr2	22445596	22445656	pseudogene	Gm13339	.	ENSMUSG00000082884	ProperStrand	24	chr7	117189974	117190067	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-5.0740
chr4	53873618	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	chr19	8799829	8799894	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-1.2564
chr4	131908357	131908463	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr13	112540780	112541440	protein_coding	Map3k1	exon	ENSMUSG00000021754	ProperStrand	113	1	-6.0078
chr6	38384214	38384231	protein_coding	Ubn2	exon	ENSMUSG00000038538	ProperStrand	86	chr4	116826722	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-6.0704
chr3	130961930	130961946	protein_coding	Hadh	intron	ENSMUSG00000027984	NonProperStrand	13	chr5	121655099	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-6.7475
chr18	57400307	57400324	protein_coding	Megf10	exon	ENSMUSG00000024593	ProperStrand	143	chr11	62416951	62417010	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-4.3612
chr17	45708501	45708517	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr15	97620871	97620960	protein_coding	Slc48a1	intron	ENSMUSG00000081534	ProperStrand	16	1	-9.3968
chr6	37820882	37820926	protein_coding	Trim24	utr5	ENSMUSG00000029833	ProperStrand	27	chrX	80509543	80509560	protein_coding	Dmd	intron	ENSMUSG00000045103	NonProperStrand	23	1	-16.8197
chr3	32419134	32419234	protein_coding	Zfp639	exon	ENSMUSG00000027667	ProperStrand	25	chr8	112363233	112363275	snoRNA	ENSMUSG00000077549_Snord71	.	ENSMUSG00000077549	ProperStrand	196	1	-12.7117
chr18	75160711	75160776	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	chr10	90581034	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	2	-2.3992
chr15	85057530	85060031	protein_coding	Fbln1	exon	ENSMUSG00000006369	ProperStrand	32	chr16	57391761	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	3	-inf
chr3	152450610	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	chr4	131866608	131866669	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	1	-4.6688
chr11	101489325	101489596	protein_coding	Rdm1	exon	ENSMUSG00000010362	ProperStrand	28	chr10	6063958	6063978	protein_coding	Akap12	intron	ENSMUSG00000038587	ProperStrand	1008	1	-9.2085
chr13	65361155	65361173	protein_coding	Gm10775	utr5	ENSMUSG00000074847	NonProperStrand	1	chr17	39985563	39985663	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-inf
chr19	8799582	8799644	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	chr3	88497863	88497980	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	3	-4.2361
chr10	87820027	87820043	protein_coding	Dram1	intron	ENSMUSG00000020057	ProperStrand	24	chr11	116535921	116535982	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	1	-7.7387
chr19	5607962	5609486	protein_coding	Kat5	exon	ENSMUSG00000024926	ProperStrand	20	chr16	23110891	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-4.8132
chr9	72596876	72596892	protein_coding	Nedd4	utr3	ENSMUSG00000032216	NonProperStrand	8	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.4974
chr4	91782312	91782331	LTR	LTR78	ERV1	chr4LTR7891782210	ProperStrand	2	chrX	71517823	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	2	-inf
chr6	122794431	122794517	protein_coding	Foxj2	utr3	ENSMUSG00000003154	ProperStrand	5	chr4	131908688	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.7672
chr11	98769120	98769136	protein_coding	Cdc6	utr5	ENSMUSG00000017499	NonProperStrand	2	chr4	131865860	131865988	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-8.7800
chr2	29296079	29296097	protein_coding	Med27	intron	ENSMUSG00000026799	ProperStrand	7	chr2	26493363	26493475	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-8.0386
chr2	34726093	34726110	protein_coding	Psmd5	intron	ENSMUSG00000026869	NonProperStrand	4	chr15	79908929	79908955	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-11.1005
chr8	73183475	73183493	protein_coding	Pgpep1	intron	ENSMUSG00000056204	ProperStrand	12	chr4	131865868	131865986	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.6729
chr7	116663711	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	chr4	3762227	3762299	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	3	-0.9312
chr3	11580450	11580467	LINE	Lx3A	L1	chr3Lx3A11580299	ProperStrand	53	mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	1	-6.1480
chr17	24877124	24878935	protein_coding	Sepx1	utr3	ENSMUSG00000075705	NonProperStrand	1	chr16	23111467	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	NonProperStrand	38	1	-inf
chr9	15130704	15130739	snoRNA	ENSMUSG00000077506_Scarna9	.	ENSMUSG00000077506	ProperStrand	148	chr1	162965980	162966037	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-3.6551
chr6	92325824	92325919	protein_coding	Prickle2	utr3	ENSMUSG00000030020	ProperStrand	13	chr10	127505727	127505778	protein_coding	Ptges3	exon	ENSMUSG00000071072	ProperStrand	89	1	-15.6650
chr18	70682919	70683009	protein_coding	Poli	exon	ENSMUSG00000038425	ProperStrand	7	chr18	35714144	35714224	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-7.7147
chr1	155287318	155287355	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	chr18	35714172	35714290	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	6	-4.4142
chr11	52292760	52292850	Simple_repeat	(CAG)n	Simple_repeat	chr11(CAG)n52292725	NonProperStrand	1	chr11	52292259	52292349	pseudogene	Gm12209	.	ENSMUSG00000081297	ProperStrand	1	1	-inf
chr1	38079097	38089130	protein_coding	Eif5b	exon	ENSMUSG00000026083	ProperStrand	118	chr9	39358287	39358304	protein_coding	Olfr958	exon	ENSMUSG00000050853	NonProperStrand	266	1	-8.9724
chr18	46115960	46116040	LINE	Lx5	L1	chr18Lx546114366	ProperStrand	1	chr18	46116425	46116515	LTR	RLTR20B3	ERVK	chr18RLTR20B346116266	ProperStrand	1	1	-inf
chr4	132713306	132713323	protein_coding	Wasf2	intron	ENSMUSG00000028868	ProperStrand	56	chr8	119955184	119960528	protein_coding	4933407C03Rik	exon	ENSMUSG00000034390	ProperStrand	48	1	-13.8971
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr2	37255577	37255610	snoRNA	ENSMUSG00000077756_Snord90	.	ENSMUSG00000077756	ProperStrand	167	2	-8.5681
chr19	10281007	10281678	protein_coding	1810006K21Rik	exon	ENSMUSG00000036372	ProperStrand	9	chr5	130295414	130295523	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-9.0833
chr4	131908364	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	chr10	90644839	90644902	tRNA	tRNA856-AspGTC	.	602881	ProperStrand	65	1	-1.3054
chr7	73128675	73170153	protein_coding	Pcsk6	exon	ENSMUSG00000030513	ProperStrand	32	chr7	87910246	87911824	protein_coding	Iqgap1	exon	ENSMUSG00000030536	ProperStrand	43	1	-15.2605
chr13	73800065	73800081	protein_coding	Slc6a18	utr3	ENSMUSG00000021612	ProperStrand	4	chr10	23506278	23506314	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-12.6067
chr11	60678368	60692287	protein_coding	Tmem11	exon	ENSMUSG00000043284	ProperStrand	27	chr18	35714169	35714292	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	3	-11.8008
chr11	97641505	97641588	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	chr2	130102069	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-0.7776
chr15	34370574	34370682	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	chr15	98356841	98356913	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	4	-0.8687
chr11	33060348	33060897	protein_coding	Npm1	exon	ENSMUSG00000057113	ProperStrand	352	chr16	23110464	23110563	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	4	-1.8362
chr10	126502001	126502253	protein_coding	Cdk4	exon	ENSMUSG00000006728	ProperStrand	47	chr19	5726263	5726279	protein_coding	Ehbp1l1	utr5	ENSMUSG00000024937	ProperStrand	75	1	-13.3615
chr9	65049530	65049580	snRNA	ENSMUSG00000075930_U5	.	ENSMUSG00000075930	ProperStrand	175	chr17	13112529	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-2.6169
chr11	117634858	117634961	protein_coding	Tmc6	intron	ENSMUSG00000025572	ProperStrand	60	chr4	140578068	140578189	protein_coding	Crocc	exon	ENSMUSG00000040860	ProperStrand	44	1	-13.9383
chr2	101795311	101898074	protein_coding	Ldlrad3	exon	ENSMUSG00000048058	ProperStrand	53	chr16	23111374	23111464	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-2.7134
chr3	99944123	99944174	protein_coding	Wdr3	exon	ENSMUSG00000033285	ProperStrand	30	chr19	8963027	8963089	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.5028
chr9	107848169	107848259	protein_coding	Camkv	intron	ENSMUSG00000032936	ProperStrand	14	chr14	76247740	76247820	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-7.0446
chr14	32069951	32070528	protein_coding	Bap1	exon	ENSMUSG00000021901	ProperStrand	12	chr9	78327442	78327532	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-9.5907
chr7	148644096	148644361	protein_coding	Pnpla2	exon	ENSMUSG00000025509	ProperStrand	13	chr16	23111451	23111492	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-6.6036
chr1	194571768	194571835	snRNA	ENSMUSG00000064881_U5	.	ENSMUSG00000064881	ProperStrand	187	chr10	23505152	23505208	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-1.4087
chr7	51969167	51969183	protein_coding	Izumo2	intron	ENSMUSG00000066500	ProperStrand	1	chr10	90581140	90581218	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-inf
chr11	87252940	87253030	protein_coding	Tex14	intron	ENSMUSG00000010342	ProperStrand	41	chr2	118356525	118356564	protein_coding	Bmf	utr3	ENSMUSG00000040093	ProperStrand	53	3	-inf
chr1	18204299	18204315	pseudogene	Defb44-ps	.	ENSMUSG00000070977	ProperStrand	37	chr7	29136525	29136595	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.2150
chr10	44817300	44827605	protein_coding	Prep	exon	ENSMUSG00000019849	ProperStrand	21	chr17	35087897	35087946	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-7.2845
chr10	80013196	80013286	protein_coding	Rexo1	exon	ENSMUSG00000047417	ProperStrand	46	chr7	116663634	116663714	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.9772
chr2	90235297	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	50029211	50044239	protein_coding	Lypd6	exon	ENSMUSG00000050447	NonProperStrand	14	1	-7.3487
chr10	42298355	42298372	protein_coding	Nr2e1	intron	ENSMUSG00000019803	ProperStrand	32	chr4	131399490	131399506	protein_coding	Mecr	exon	ENSMUSG00000028910	NonProperStrand	109	1	-13.3834
chr18	38412547	38413576	protein_coding	0610009O20Rik	exon	ENSMUSG00000024442	ProperStrand	25	chr16	23111385	23111475	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-4.6757
chr9	50816824	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	chr4	22414139	22414155	protein_coding	Pou3f2	exon	ENSMUSG00000052621	NonProperStrand	90	1	-10.9930
chr14	26469230	26469293	protein_coding	Zmiz1	exon	ENSMUSG00000007817	ProperStrand	34	chr16	23110964	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-3.0056
chr11	6428035	6428170	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr17	35299507	35299641	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	39	-6.6285
chr15	76079004	76079072	protein_coding	Grina	exon	ENSMUSG00000022564	ProperStrand	18	chr9	15119646	15119711	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.8766
chr1	122237195	122237211	protein_coding	C1ql2	utr5	ENSMUSG00000036907	NonProperStrand	9	chr9	44731647	44731680	protein_coding	Ube4a	utr3	ENSMUSG00000059890	NonProperStrand	3	1	-inf
chr6	29515231	29515732	protein_coding	Tnpo3	exon	ENSMUSG00000012535	ProperStrand	58	chr9	15119731	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.6885
chr7	123307949	123314204	protein_coding	Plekha7	exon	ENSMUSG00000045659	ProperStrand	66	chr11	6519837	6519917	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-7.7523
chr16	90791342	90791422	protein_coding	Urb1	exon	ENSMUSG00000039929	ProperStrand	71	chr19	8963097	8963187	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	19	-inf
chr17	68097445	68097521	protein_coding	Lama1	exon	ENSMUSG00000032796	ProperStrand	168	chr2	130102052	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	5	-14.4691
chr2	158258572	158258590	protein_coding	Ralgapb	exon	ENSMUSG00000027652	ProperStrand	22	chr13	34436854	34436870	protein_coding	Slc22a23	utr5	ENSMUSG00000038267	ProperStrand	95	1	-14.4272
chr5	23825941	23825957	protein_coding	Kcnh2	exon	ENSMUSG00000038319	ProperStrand	242	chr16	90386837	90386853	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	1	-9.4136
chr6	122678339	122690445	protein_coding	Slc2a3	utr3	ENSMUSG00000003153	ProperStrand	682	chr5	74489584	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	9	-7.8075
chr8	13416895	13416912	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr11	70813424	70813441	protein_coding	Dhx33	exon	ENSMUSG00000040620	ProperStrand	41	1	-7.2115
chr11	116535915	116535982	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-1.6446
chr1	162968467	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	chr2	91436228	91436261	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	2	-1.9736
chr9	78326822	78326893	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr12	60774069	60774109	snoRNA	ENSMUSG00000077603_SNORA3	.	ENSMUSG00000077603	ProperStrand	185	1	-4.1550
chr14	41586481	41586500	LTR	ORR1E	MaLR	chr14ORR1E41586470	ProperStrand	1	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-inf
chr18	36828309	36828380	protein_coding	Sra1	exon	ENSMUSG00000006050	ProperStrand	5	chr16	23110828	23110915	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-11.1940
chr10	75852021	75852052	protein_coding	Pcnt	exon	ENSMUSG00000001151	ProperStrand	127	chr1	127491938	127491955	protein_coding	Slc35f5	utr3	ENSMUSG00000026342	ProperStrand	70	1	-11.4981
chr9	120864575	120864675	protein_coding	Ctnnb1	exon	ENSMUSG00000006932	ProperStrand	214	chr15	76548660	76548678	protein_coding	Lrrc24	exon	ENSMUSG00000033707	ProperStrand	1	1	-inf
chr8	28930450	28930530	SINE	B2_Mm2	B2	chr8B2_Mm228930395	ProperStrand	4	chr5	143666309	143666399	protein_coding	Actb	exon	ENSMUSG00000029580	ProperStrand	446	3	-20.2414
chr5	63279402	63279418	protein_coding	Gm17384	exon	ENSMUSG00000090326	NonProperStrand	6	chr5	108336363	108336409	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-9.5743
chr4	46464077	46464133	protein_coding	Anp32b	utr5	ENSMUSG00000028333	ProperStrand	229	chr8	106942360	106942376	protein_coding	Dync1li2	utr3	ENSMUSG00000035770	ProperStrand	75	1	-10.1791
chr14	78898761	78902747	protein_coding	Akap11	exon	ENSMUSG00000022016	ProperStrand	44	chr15	81218784	81220114	protein_coding	St13	exon	ENSMUSG00000022403	ProperStrand	59	1	-13.9745
chr9	72971298	72971388	SINE	B1_Mus1	Alu	chr9B1_Mus172971305	ProperStrand	1	chr4	43505819	43505909	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	1	-inf
chr5	65788857	65788947	protein_coding	Lias	exon	ENSMUSG00000029199	ProperStrand	9	chrX	34622930	34623010	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-6.8852
chr15	58800831	58816713	protein_coding	Mtss1	intron	ENSMUSG00000022353	ProperStrand	68	chr18	35716764	35716875	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	13	-19.8607
chr6	28576106	28576188	protein_coding	Snd1	exon	ENSMUSG00000001424	ProperStrand	210	chr1	155287316	155287355	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	6	-21.4457
chr9	99845233	99845323	LINE	L1_Mur1	L1	chr9L1_Mur199844948	ProperStrand	1	chr9	99845364	99845444	LINE	L1_Mur1	L1	chr9L1_Mur199845353	ProperStrand	1	1	-inf
chr2	164257636	164257652	protein_coding	Sdc4	intron	ENSMUSG00000017009	ProperStrand	177	chr16	5055376	5055402	protein_coding	Ubn1	exon	ENSMUSG00000039473	ProperStrand	35	1	-12.2322
chr9	98480693	98480763	protein_coding	Copb2	exon	ENSMUSG00000032458	ProperStrand	33	chr18	35714144	35714292	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	6	-21.1107
chr5	104284095	104284144	protein_coding	Aff1	utr3	ENSMUSG00000029313	ProperStrand	82	chr2	144087324	144087424	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-5.9296
chr14	69811730	69811747	protein_coding	Nkx3-1	utr3	ENSMUSG00000022061	NonProperStrand	4	chr4	141317273	141317327	protein_coding	Dnajc16	utr3	ENSMUSG00000040697	ProperStrand	12	1	-21.0614
chr18	36961610	36961661	misc_RNA	Vault	.	ENSMUSG00000065145	ProperStrand	177	chr3	94683692	94683792	protein_coding	Pogz	exon	ENSMUSG00000038902	ProperStrand	65	1	-10.9819
chr16	17131484	17131564	protein_coding	Sdf2l1	intron	ENSMUSG00000022769	ProperStrand	9	chr8	73419662	73419752	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-6.8403
chr2	93044455	93044471	protein_coding	Tspan18	utr3	ENSMUSG00000027217	NonProperStrand	14	chr11	77996560	77996609	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-9.0246
chr11	33052711	33052801	protein_coding	Npm1	utr3	ENSMUSG00000057113	ProperStrand	352	chr2	130101988	130102068	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-2.1227
chr11	116535478	116535531	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr14	121996863	121996898	protein_coding	Dock9	exon	ENSMUSG00000025558	ProperStrand	38	2	-11.0042
chr10	41450621	41450640	protein_coding	Cep57l1	intron	ENSMUSG00000019813	ProperStrand	36	chr4	131908808	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.9880
chr3	94304231	94304321	protein_coding	Snx27	utr3	ENSMUSG00000028136	ProperStrand	24	chr17	35299560	35299640	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-6.5813
chr5	139702738	139702779	protein_coding	Sun1	exon	ENSMUSG00000036817	ProperStrand	108	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-4.7258
chr15	25832345	25832435	protein_coding	Fam134b	intron	ENSMUSG00000022270	NonProperStrand	9	chr11	85873476	85873567	protein_coding	Brip1	utr3	ENSMUSG00000034329	ProperStrand	16	1	-19.4429
chr5	143664905	143666995	protein_coding	Actb	exon	ENSMUSG00000029580	ProperStrand	446	chr16	23111721	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	7	-1.9669
chr5	54389948	54389964	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	chr8	73419657	73419729	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-1.1180
chr15	76005537	76024893	protein_coding	Plec	utr5	ENSMUSG00000022565	ProperStrand	186	chr4	116826699	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	2	-7.5860
chr15	103024359	103024397	protein_coding	Cbx5	utr3	ENSMUSG00000009575	ProperStrand	98	chr5	130300460	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-3.1527
chr5	136175343	136210267	protein_coding	Por	intron	ENSMUSG00000005514	ProperStrand	42	chr10	23505151	23505243	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-3.2403
chr12	88640531	88640548	protein_coding	Ism2	exon	ENSMUSG00000050671	ProperStrand	12	chr10	127522345	127522400	snoRNA	ENSMUSG00000093245_AC131120.1	.	ENSMUSG00000093245	ProperStrand	77	1	-16.0883
chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	chr17	24856620	24856720	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-2.8931
chr2	132078890	132078915	protein_coding	Pcna	utr5	ENSMUSG00000027342	ProperStrand	25	chr9	15119661	15119761	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.2372
chr1	71341491	71341509	protein_coding	Abca12	exon	ENSMUSG00000050296	NonProperStrand	143	chr1	162965986	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-3.7435
chr8	107872968	107893180	protein_coding	Slc9a5	utr3	ENSMUSG00000014786	ProperStrand	26	chr1	162965541	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-8.0649
chr2	90235315	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	105827408	105827424	antisense	Gm11651	.	ENSMUSG00000085297	ProperStrand	3	1	-10.7414
chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	chr16	19883898	19884021	protein_coding	A930003A15Rik	exon	ENSMUSG00000075330	ProperStrand	93	1	-9.7388
chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	chr7	52381980	52382013	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-2.8786
chr2	90235289	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr15	5068404	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	7	-1.2944
chr9	15130912	15131005	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	chr11	62416966	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-2.2446
chr11	94352742	94352759	protein_coding	Epn3	exon	ENSMUSG00000010080	ProperStrand	6	chr1	162965531	162965554	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-7.8657
chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	chr4	131908688	131908892	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	6	-4.4603
chrX	132674594	132674661	protein_coding	Bex4	exon	ENSMUSG00000047844	ProperStrand	13	chr11	69483146	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-8.8334
chr19	5118293	5118310	protein_coding	Klc2	utr5	ENSMUSG00000024862	ProperStrand	25	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-11.1392
chr15	61553656	61553746	LINE	Lx2	L1	chr15Lx261553058	NonProperStrand	1	chr1	25743724	25743814	protein_coding	Bai3	intron	ENSMUSG00000033569	ProperStrand	9	1	-inf
chr6	83111671	83111687	protein_coding	1700003E16Rik	exon	ENSMUSG00000030030	ProperStrand	352	chr12	88778746	88778767	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-3.1250
chr17	13115658	13115782	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	chr11	69481331	69481425	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	6	-1.0394
chr7	96507009	96507028	protein_coding	Tmem135	intron	ENSMUSG00000039428	NonProperStrand	24	chrX	34622906	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	14	-inf
chr1	58116010	58116028	protein_coding	Aox1	exon	ENSMUSG00000063558	ProperStrand	20	chr7	116664794	116664878	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-4.5800
chr7	4744588	4746073	protein_coding	Rpl28	exon	ENSMUSG00000030432	ProperStrand	220	chr19	8798740	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	2	-4.2766
chr6	71900911	71903014	protein_coding	Polr1a	exon	ENSMUSG00000049553	ProperStrand	109	chr4	131908688	131908783	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-1.1608
chr2	90235293	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr3	129593346	129597697	protein_coding	Pla2g12a	intron	ENSMUSG00000027999	ProperStrand	6	1	-9.1372
chr10	80643857	80644017	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr4	44363852	44363932	protein_coding	Melk	exon	ENSMUSG00000035683	ProperStrand	58	1	-6.1658
chr13	7957927	7957943	LINE	Lx9	L1	chr13Lx97957880	NonProperStrand	1	chr7	86600977	86601015	protein_coding	Polg	exon	ENSMUSG00000039176	ProperStrand	93	1	-inf
chr2	38279902	38279919	lincRNA	Gm13589	intron	ENSMUSG00000085950	NonProperStrand	31	chr4	131865855	131865917	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.8751
chr5	136363872	136363898	protein_coding	Hspb1	utr5	ENSMUSG00000004951	ProperStrand	25	chr7	116663633	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-10.0700
chr5	141181270	141181311	protein_coding	Baat1	intron	ENSMUSG00000000148	ProperStrand	14	chr1	180258958	180259014	protein_coding	Hnrnpu	utr3	ENSMUSG00000039630	ProperStrand	286	1	-13.1476
chr9	44253871	44253961	SINE	B4A	B4	chr9B4A44253856	NonProperStrand	1	chr6	120056769	120056859	protein_coding	Ninj2	intron	ENSMUSG00000041377	NonProperStrand	2	1	-inf
chr16	57391760	57391792	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr19	25484358	25484374	protein_coding	Kank1	exon	ENSMUSG00000032702	ProperStrand	218	1	-5.2516
chr9	14350455	14350532	protein_coding	Amotl1	utr3	ENSMUSG00000013076	ProperStrand	72	chr2	26494710	26494800	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	4	-9.7881
chr2	181318961	181319061	protein_coding	Znf512b	utr3	ENSMUSG00000000823	ProperStrand	17	chr16	23110973	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-3.4874
chr1	193140437	193140537	protein_coding	Nenf	intron	ENSMUSG00000037499	ProperStrand	2	chr16	23110464	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-9.6327
chr5	148113281	148113297	protein_coding	Cdx2	utr3	ENSMUSG00000029646	ProperStrand	276	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-4.7458
chr13	15569895	15569913	protein_coding	Gli3	exon	ENSMUSG00000021318	ProperStrand	54	chr8	129468746	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-4.6154
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr5	106031418	106031437	protein_coding	Lrrc8c	intron	ENSMUSG00000054720	NonProperStrand	12	1	-11.0688
chr11	100182115	100182136	protein_coding	Eif1	exon	ENSMUSG00000035530	ProperStrand	115	chr9	120038625	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.9341
chr5	116444294	116445421	protein_coding	Cit	exon	ENSMUSG00000029516	ProperStrand	45	chr16	23111374	23111464	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.6772
chr16	20675557	20675579	protein_coding	Eif4g1	exon	ENSMUSG00000045983	ProperStrand	199	chr19	8799037	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	2	-6.0109
chr11	53230688	53230707	protein_coding	Aff4	utr3	ENSMUSG00000049470	ProperStrand	94	chr7	116663712	116663763	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-3.2596
chr1	45488603	45488620	protein_coding	Col5a2	intron	ENSMUSG00000026042	ProperStrand	184	chr15	82980136	82980186	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-4.9424
chr6	91437579	91437669	protein_coding	Tmem43	utr3	ENSMUSG00000030095	ProperStrand	14	chr19	8963103	8963183	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.9719
chr16	91270626	91270642	protein_coding	Olig1	exon	ENSMUSG00000046160	NonProperStrand	32	chr4	131908299	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.4145
chr3	87538395	87538438	protein_coding	Arhgef11	exon	ENSMUSG00000041977	ProperStrand	16	chr3	82931927	82931948	protein_coding	Gm10710	exon	ENSMUSG00000074517	ProperStrand	2	1	-inf
chr4	149616258	149618134	protein_coding	Eno1	exon	ENSMUSG00000063524	ProperStrand	432	chr11	68886972	68887018	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-0.9172
chr12	118288413	118288434	protein_coding	Ptprn2	intron	ENSMUSG00000056553	NonProperStrand	38	chr1	89681248	89681348	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-6.3407
chr7	116664809	116664921	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	chr18	74938193	74938314	snoRNA	ENSMUSG00000089235_SCARNA17	.	ENSMUSG00000089235	ProperStrand	1128	14	-3.4626
chr9	108849508	108849685	protein_coding	Uqcrc1	exon	ENSMUSG00000025651	ProperStrand	43	chr1	162965538	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.8927
chr10	79362083	79362870	protein_coding	Med16	exon	ENSMUSG00000013833	ProperStrand	13	chr11	62416599	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-13.2206
chr2	30675197	30675213	protein_coding	Mettl11a	exon	ENSMUSG00000026857	ProperStrand	51	chr5	145887645	145887672	protein_coding	Arpc1b	exon	ENSMUSG00000029622	ProperStrand	17	1	-16.2408
chr14	47870515	47870562	protein_coding	Wdhd1	exon	ENSMUSG00000037572	ProperStrand	35	chr1	102076761	102076790	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	2	-16.5528
chr17	47738004	47738064	protein_coding	Bysl	utr3	ENSMUSG00000023988	ProperStrand	48	chr18	56892986	56899569	protein_coding	Lmnb1	exon	ENSMUSG00000024590	ProperStrand	176	4	-19.3108
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr5	100988773	100988834	protein_coding	Plac8	exon	ENSMUSG00000029322	ProperStrand	5	4	-19.1314
chr16	13814103	13814137	protein_coding	Rrn3	utr3	ENSMUSG00000022682	ProperStrand	58	chr10	80677557	80677574	protein_coding	Atcay	exon	ENSMUSG00000034958	NonProperStrand	16	1	-16.0688
chr11	3043233	3043313	antisense	Gm11399	.	ENSMUSG00000087111	ProperStrand	1	chr11	3043426	3043516	protein_coding	Sfi1	intron	ENSMUSG00000023764	NonProperStrand	20	1	-inf
chr12	66104613	66104631	protein_coding	Fam179b	intron	ENSMUSG00000035614	ProperStrand	21	chr2	158182156	158182193	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-7.0817
chr2	28404205	28404223	protein_coding	Ralgds	exon	ENSMUSG00000026821	NonProperStrand	60	chr19	8963027	8963051	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.2748
chr8	73882534	73882550	protein_coding	Myo9b	exon	ENSMUSG00000004677	NonProperStrand	8	chr3	68889026	68889142	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	6	-19.8742
chr16	34357475	34360911	protein_coding	Kalrn	exon	ENSMUSG00000061751	NonProperStrand	52	chr7	116664844	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-4.8800
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr12	81741951	81744760	protein_coding	Erh	exon	ENSMUSG00000021131	ProperStrand	20	1	-10.0139
chr6	112576132	112576149	protein_coding	Rad18	intron	ENSMUSG00000030254	NonProperStrand	2	chr10	23505152	23505245	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-8.0476
chr11	23255030	23255070	protein_coding	Usp34	exon	ENSMUSG00000056342	ProperStrand	68	chr1	162967540	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-3.2459
chr11	116533823	116533893	snoRNA	ENSMUSG00000065640_Snord1c	.	ENSMUSG00000065640	ProperStrand	373	chr3	123210854	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	11	-7.4462
chr12	111930543	111930573	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr3	144141680	144141697	protein_coding	Hs2st1	intron	ENSMUSG00000040151	NonProperStrand	31	1	-9.5888
chr1	162967115	162967165	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	chr17	24857742	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	7	-1.7094
chr4	137214062	137214142	protein_coding	Usp48	utr3	ENSMUSG00000043411	ProperStrand	135	chr9	15119676	15119766	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.3437
chr1	167390471	167390489	protein_coding	Dcaf6	utr5	ENSMUSG00000026571	NonProperStrand	3	chr2	158182222	158182280	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-11.3060
chr9	20833906	20833924	lincRNA	Gm20603	exon	ENSMUSG00000091118	ProperStrand	3	chr11	97642952	97643011	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-8.5513
chrX	160396313	160396329	protein_coding	Zrsr2	utr5	ENSMUSG00000031370	ProperStrand	57	chr19	46836213	46836229	protein_coding	Cnnm2	utr5	ENSMUSG00000064105	NonProperStrand	19	1	-15.7381
chr3	82816757	82816774	protein_coding	Fgg	exon	ENSMUSG00000033860	NonProperStrand	321	chr10	39978405	39978485	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-2.3627
chr9	108701638	108701738	protein_coding	Ip6k2	exon	ENSMUSG00000032599	ProperStrand	16	chr15	79913287	79913345	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	13	-inf
chr18	80623987	80624030	protein_coding	Ctdp1	intron	ENSMUSG00000033323	ProperStrand	69	chr1	162965542	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-7.7146
chr9	40612832	40612922	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	chr8	32260351	32260431	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-1.3738
chr7	29091519	29091882	protein_coding	Timm50	exon	ENSMUSG00000003438	ProperStrand	6	chr5	147394860	147394876	protein_coding	Gpr12	exon	ENSMUSG00000041468	NonProperStrand	20	1	-18.8216
chr2	127259518	127259547	protein_coding	Gpat2	exon	ENSMUSG00000046338	ProperStrand	19	chr11	68716761	68716808	protein_coding	Rpl26	exon	ENSMUSG00000060938	ProperStrand	130	2	-19.5745
chr4	131825994	131826033	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	chr1	162968233	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	2	-5.0496
chr8	13416895	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr10	110918549	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	13	-2.8497
chr5	111301054	111301115	protein_coding	Chek2	exon	ENSMUSG00000029521	ProperStrand	4	chr8	113366283	113366306	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	1	-14.8602
chr2	160587042	160587107	protein_coding	Plcg1	exon	ENSMUSG00000016933	ProperStrand	65	chr2	59679466	59679500	protein_coding	Tanc1	intron	ENSMUSG00000035168	ProperStrand	80	1	-12.5743
chr8	96590215	96590231	protein_coding	Ogfod1	utr3	ENSMUSG00000033009	NonProperStrand	5	chr17	35087895	35087964	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	3	-19.7339
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr5	32657192	32657208	protein_coding	Plb1	exon	ENSMUSG00000029134	ProperStrand	50	1	-6.2632
chr15	79358688	79376919	protein_coding	Ddx17	utr3	ENSMUSG00000055065	ProperStrand	140	chr17	24857720	24857812	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	5	-6.3667
chr15	45130790	45130809	LINE	L1_Mus2	L1	chr15L1_Mus245129537	NonProperStrand	17	chr15	77793734	77794517	protein_coding	Eif3d	exon	ENSMUSG00000016554	ProperStrand	69	1	-15.5934
chr7	6564582	6564636	LTR	IAPLTR3	ERVK	chr7IAPLTR36564537	NonProperStrand	1	chr9	13105778	13105808	LTR	IAPLTR3	ERVK	chr9IAPLTR313105745	NonProperStrand	1	1	-inf
chr3	57450598	57450619	protein_coding	Commd2	utr3	ENSMUSG00000036513	ProperStrand	23	chr16	23111394	23111484	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.7951
chr6	28836611	28838088	protein_coding	Snd1	exon	ENSMUSG00000001424	NonProperStrand	14	chr10	127521218	127521272	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	2	-18.8071
chr16	23110823	23110851	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr4	55363030	55363046	protein_coding	Rad23b	utr5	ENSMUSG00000028426	ProperStrand	86	1	-8.2932
chr6	16387352	16387432	LINE	L1_Mus4	L1	chr6L1_Mus416385355	NonProperStrand	1	chr1	12658152	12658242	lincRNA	Gm17644	exon	ENSMUSG00000066918	ProperStrand	10	1	-inf
chr11	4978587	4979054	protein_coding-noncoding	Ewsr1	utr3	ENSMUSG00000009079	ProperStrand	3	chr8	87223594	87223610	protein_coding	Trmt1	exon	ENSMUSG00000001909	NonProperStrand	60	1	-21.0062
chr17	32453268	32453285	protein_coding	Akap8	exon	ENSMUSG00000024045	ProperStrand	339	chr4	131865391	131865458	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-1.1262
chr17	26793408	26793508	protein_coding	Ergic1	utr3	ENSMUSG00000001576	ProperStrand	114	chr11	58115972	58116005	tRNA	tRNA1911-LeuCAA	.	85935	ProperStrand	165	1	-9.9948
chr7	135116081	135116181	protein_coding	Fus	exon	ENSMUSG00000030795	ProperStrand	162	chr7	118219574	118219620	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-2.3807
chr6	83067570	83067640	protein_coding	Mogs	exon	ENSMUSG00000030036	ProperStrand	14	chr16	23110986	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.2008
chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	chr1	168239525	168239541	protein_coding	Ildr2	exon	ENSMUSG00000040612	ProperStrand	103	1	-9.5344
chr7	57157193	57157220	SINE	ID_B1	B4	chr7ID_B157157191	ProperStrand	2	chr9	15119722	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-inf
chr18	21286769	21286836	protein_coding	Fam59a	utr3	ENSMUSG00000042680	ProperStrand	9	chr11	62416968	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-9.8982
chr13	9833550	9833590	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr12	76694276	76696652	protein_coding	Ppp2r5e	utr5	ENSMUSG00000021051	ProperStrand	9	1	-8.7793
chr10	126954593	126956268	protein_coding	Shmt2	exon	ENSMUSG00000025403	ProperStrand	94	chr16	23111741	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-3.7831
chr17	25116604	25119246	protein_coding	Cramp1l	exon	ENSMUSG00000038002	ProperStrand	22	chr9	120037910	120038000	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-6.6827
chr1	183849562	183849603	protein_coding	Enah	exon	ENSMUSG00000022995	ProperStrand	196	chr14	76247735	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-2.0676
chr7	35023072	35023172	protein_coding	4931406P16Rik	utr3	ENSMUSG00000066571	ProperStrand	75	chr17	13112564	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-4.1551
chr7	133938767	133938873	protein_coding	Aldoa	utr3	ENSMUSG00000030695	ProperStrand	721	chr18	75161562	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-2.4979
chr2	34631408	34631527	protein_coding	Hspa5	exon	ENSMUSG00000026864	ProperStrand	181	chr2	63936034	63936052	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	6	-20.4475
chr8	41570003	41570019	protein_coding	Zdhhc2	utr3	ENSMUSG00000039470	NonProperStrand	85	chr7	116663633	116663714	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.9352
chr5	74489208	74489229	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr12	111933477	111933556	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	2	-2.2988
chr11	69305080	69305097	protein_coding	Dnahc2	exon	ENSMUSG00000005237	ProperStrand	95	chr5	121655099	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.9119
chr8	34917044	34917116	protein_coding	Rbpms	intron	ENSMUSG00000031586	ProperStrand	58	chr14	33005141	33005207	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-4.0574
chr8	114235293	114237247	protein_coding	Bcar1	exon	ENSMUSG00000031955	ProperStrand	44	chr8	113366285	113366321	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	1	-9.8034
chr5	145892338	145893739	protein_coding	Pdap1	exon	ENSMUSG00000029623	ProperStrand	112	chr7	133940890	133940940	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	1	-7.0971
chr8	13016695	13016723	protein_coding	Mcf2l	intron	ENSMUSG00000031442	ProperStrand	14	chr4	55021312	55021351	protein_coding	Zfp462	exon	ENSMUSG00000060206	ProperStrand	37	1	-17.2537
chr7	125961627	125961644	protein_coding	9030624J02Rik	intron	ENSMUSG00000030982	NonProperStrand	5	chr2	26494708	26494797	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-13.2598
chr7	52382021	52382121	protein_coding-noncoding	Rpl13a	utr3	ENSMUSG00000074129	ProperStrand	106	chr4	131908689	131908708	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-3.1405
chr7	29137549	29137665	protein_coding	Rps16	utr3	ENSMUSG00000037563	ProperStrand	191	chr15	98662793	98662826	protein_coding	Mll2	utr3	ENSMUSG00000048154	ProperStrand	170	4	-20.4567
chr9	114284496	114284541	protein_coding	Crtap	utr3	ENSMUSG00000032431	ProperStrand	15	chr16	23110828	23110874	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.0842
chr2	145076805	145209256	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	chr10	23505149	23505282	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	18	-0.9165
chr8	113692638	113782864	protein_coding	Glg1	exon	ENSMUSG00000003316	ProperStrand	83	chr4	131908688	131908752	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-1.6676
chr17	35294932	35294998	protein_coding	Prrc2a	exon	ENSMUSG00000024393	ProperStrand	315	chr14	61398407	61398423	protein_coding	C1qtnf9	exon	ENSMUSG00000071347	ProperStrand	187	1	-7.7190
chr12	77383979	77384966	protein_coding	Mthfd1	exon	ENSMUSG00000021048	ProperStrand	71	chr11	69481384	69481474	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-5.0299
chr14	22489804	22489863	protein_coding	Myst4	exon	ENSMUSG00000021767	ProperStrand	151	chr18	33954818	33954908	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-1.9113
chr15	102844825	102844841	protein_coding	Hoxc5	exon	ENSMUSG00000022485	ProperStrand	40	chr5	115939542	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-8.6785
chr9	59513120	59513155	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr17	25996060	25996076	protein_coding	Wdr90	exon	ENSMUSG00000073434	ProperStrand	91	1	-6.3534
chr1	152289330	152289347	protein_coding	Tpr	exon	ENSMUSG00000006005	NonProperStrand	3	chr9	123734680	123734712	protein_coding	Fyco1	exon	ENSMUSG00000025241	ProperStrand	31	1	-inf
chr5	121074657	121074715	protein_coding	Ddx54	exon	ENSMUSG00000029599	ProperStrand	104	chr2	41199972	41199989	protein_coding	Lrp1b	exon	ENSMUSG00000049252	ProperStrand	376	2	-13.5675
chr14	38746400	38746490	LINE	Lx6	L1	chr14Lx638745504	ProperStrand	1	chr14	38746746	38746826	LTR	MTA_Mm	MaLR	chr14MTA_Mm38746703	NonProperStrand	1	1	-inf
chr2	145741337	145741541	protein_coding	Naa20	exon	ENSMUSG00000002728	ProperStrand	9	chr1	89681244	89681334	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-9.2815
chr11	42440243	42440259	protein_coding	Gabrb2	exon	ENSMUSG00000007653	ProperStrand	248	chr14	15572350	15572367	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	1	-8.4431
chr2	163556884	163558023	protein_coding	Ada	exon	ENSMUSG00000017697	ProperStrand	23	chr10	7401085	7401139	protein_coding	Lats1	utr5	ENSMUSG00000040021	ProperStrand	13	1	-18.0311
chr6	77195102	77195119	protein_coding	Lrrtm1	exon	ENSMUSG00000060780	ProperStrand	19	chr11	98878344	98878466	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-8.5932
chr4	116827346	116827382	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	chr9	120039578	120039678	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	9	-13.7700
chr18	24113579	24113596	protein_coding	Zfp397	intron	ENSMUSG00000024276	ProperStrand	22	chr7	25673355	25673402	protein_coding	Rps19	exon	ENSMUSG00000040952	ProperStrand	101	1	-14.3004
chr6	125190985	125191036	protein_coding	Vamp1	utr3	ENSMUSG00000030337	ProperStrand	8	chr4	122968643	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	3	-19.4855
chr13	55391546	55391563	protein_coding	Nsd1	exon	ENSMUSG00000021488	ProperStrand	186	chr15	79908967	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-3.3296
chr4	79650694	79650733	pseudogene	Gm11410	.	ENSMUSG00000083219	ProperStrand	47	chr17	35088971	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	2	-10.2944
chr2	179908710	179909020	protein_coding	Adrm1	exon	ENSMUSG00000039041	ProperStrand	27	chr8	112363223	112363274	snoRNA	ENSMUSG00000077549_Snord71	.	ENSMUSG00000077549	ProperStrand	196	1	-12.5557
chr3	98118211	98118301	protein_coding	Phgdh	exon	ENSMUSG00000053398	ProperStrand	46	chr7	116663649	116663729	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.9772
chr6	136779125	136779144	protein_coding	C030030A07Rik	utr3	ENSMUSG00000043298	ProperStrand	3	chr10	23505559	23505614	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	2	-20.0185
chrX	148776767	148776857	protein_coding	Tspyl2	exon	ENSMUSG00000041096	ProperStrand	23	chr5	121655021	121655101	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.5970
chr5	76728832	76728848	protein_coding	Clock	intron	ENSMUSG00000029238	NonProperStrand	64	chr4	130045463	130045503	protein_coding	Snrnp40	exon	ENSMUSG00000074088	ProperStrand	12	1	-16.4613
chr10	127520957	127521006	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr4	141028660	141028706	protein_coding	Spen	exon	ENSMUSG00000040761	ProperStrand	161	1	-6.7028
chr2	136915618	136915636	protein_coding	Jag1	exon	ENSMUSG00000027276	NonProperStrand	1	chr11	106362640	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-inf
chr17	39979943	39980019	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr18	63908609	63908625	protein_coding	Wdr7	intron	ENSMUSG00000040560	NonProperStrand	180	1	-5.0664
chr13	9833551	9833620	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr11	77973196	77973255	protein_coding	Traf4	utr3	ENSMUSG00000017386	ProperStrand	34	4	-18.1502
chr3	134940288	134940399	LTR	RLTR28	ERVL	chr3RLTR28134939947	ProperStrand	1	chr1	54361817	54371000	protein_coding	Ccdc150	exon	ENSMUSG00000025983	ProperStrand	56	1	-inf
chr11	84042523	84045163	protein_coding	Acaca	exon	ENSMUSG00000020532	ProperStrand	100	chr2	89368462	89368478	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	1	-9.3336
chr19	45857640	45857740	protein_coding	Mgea5	utr5	ENSMUSG00000025220	ProperStrand	53	chr7	116664811	116664869	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.7645
chr8	109181717	109181778	protein_coding	Cdh1	exon	ENSMUSG00000000303	ProperStrand	283	chr12	110925012	110925066	snoRNA	ENSMUSG00000064726_SNORD113	.	ENSMUSG00000064726	ProperStrand	42	2	-17.0916
chr1	127491934	127491955	protein_coding	Slc35f5	utr3	ENSMUSG00000026342	ProperStrand	70	chr7	116663648	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-4.0179
chr2	153237506	153237522	protein_coding	8430427H17Rik	exon	ENSMUSG00000061411	NonProperStrand	19	chr14	33005037	33005091	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-6.2373
chr9	40865562	40865578	protein_coding	Ubash3b	intron	ENSMUSG00000032020	ProperStrand	42	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-11.1474
chr16	82270498	82270514	LINE	Lx9	L1	chr16Lx982270417	ProperStrand	2	chr2	147011593	147011610	protein_coding	Nkx2-2	exon	ENSMUSG00000027434	ProperStrand	47	1	-inf
chr5	29317812	29317829	LINE	Lx7	L1	chr5Lx729317715	ProperStrand	19	chr3	123210895	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-4.1309
chr6	125091380	125091470	protein_coding	Nop2	exon	ENSMUSG00000038279	ProperStrand	39	chr19	8800379	8800459	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-4.3397
chr4	129662259	129662276	protein_coding	Bai2	utr5	ENSMUSG00000028782	ProperStrand	119	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.8323
chr3	32335123	32335189	protein_coding	Pik3ca	utr5	ENSMUSG00000027665	ProperStrand	23	chr16	23110524	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.2122
chr15	99558140	99558240	protein_coding	2310016M24Rik	exon	ENSMUSG00000023020	ProperStrand	2	chr11	69483136	69483185	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-9.6187
chr11	102294590	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr19	8799852	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-1.1544
chr11	100941258	100941275	protein_coding	Hsd17b1	exon	ENSMUSG00000019301	ProperStrand	2	chr18	35716831	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-inf
chr14	52919038	52919055	protein_coding	Mettl3	intron	ENSMUSG00000022160	ProperStrand	54	chr7	52382014	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-6.9212
chr18	60937530	60938088	protein_coding	Rps14	exon	ENSMUSG00000024608	ProperStrand	154	chr7	26518308	26518351	protein_coding	Hnrnpul1	exon	ENSMUSG00000040725	ProperStrand	84	1	-10.7453
chr1	155287316	155287355	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	chr14	52829497	52829569	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	4	-12.8519
chr9	78326652	78326778	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr10	23505778	23505798	protein_coding	Rps12	exon	ENSMUSG00000061983	ProperStrand	309	1	-3.2095
chr2	30156603	30159584	protein_coding	Nup188	exon	ENSMUSG00000052533	ProperStrand	96	chr16	17276523	17276540	protein_coding	Tmem191c	exon	ENSMUSG00000055692	ProperStrand	16	1	-15.0573
chr3	153575130	153575168	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-3.0957
chr16	4886395	4886411	protein_coding	Mgrn1	exon	ENSMUSG00000022517	NonProperStrand	157	chr1	89673728	89673755	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-1.6456
chr6	120836926	120837005	protein_coding	Bcl2l13	exon	ENSMUSG00000009112	ProperStrand	18	chr18	35716689	35716756	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-10.6484
chr10	124668285	124668301	protein_coding	Slc16a7	exon	ENSMUSG00000020102	ProperStrand	4	chr1	162965531	162965598	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-8.7752
chr10	79399402	79399482	protein_coding	Arid3a	intron	ENSMUSG00000019564	ProperStrand	16	chr9	120038497	120038587	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.5625
chr10	79174281	79174321	protein_coding	Bsg	utr3	ENSMUSG00000023175	ProperStrand	107	chr9	120039559	120039628	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	3	-6.1650
chr9	30978158	30979548	protein_coding	Aplp2	exon	ENSMUSG00000031996	ProperStrand	172	chr7	116663653	116663733	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-0.9363
chr4	123056042	123057693	protein_coding	Macf1	exon	ENSMUSG00000028649	ProperStrand	320	chr15	82725599	82725636	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	2	-8.5602
chr10	128170220	128173261	protein_coding	Dgka	exon	ENSMUSG00000025357	ProperStrand	10	chr16	23111372	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-7.4327
chr11	97642952	97643077	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	chr3	153574610	153574655	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	9	-6.9468
chr12	88649529	88649545	protein_coding	Sptlc2	utr3	ENSMUSG00000021036	ProperStrand	43	chr18	35716684	35716762	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.7374
chr3	108186892	108190531	protein_coding	Psrc1	utr5	ENSMUSG00000068744	ProperStrand	38	chr4	131908236	131908439	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-5.8403
chr9	40612830	40612920	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	chr12	106269472	106269552	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-1.0279
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr11	69481335	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	4	-1.0584
chr11	118124373	118124959	protein_coding	Usp36	exon	ENSMUSG00000033909	ProperStrand	27	chr11	69483142	69483232	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-9.6149
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr1	89681208	89681298	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	2	-1.6134
chr16	23111372	23111494	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	chr18	75161108	75161173	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	9	-0.8895
chr15	99433435	99433452	protein_coding	Aqp6	exon	ENSMUSG00000043144	NonProperStrand	45	chr5	87680856	87680872	protein_coding	Ugt2b37	exon	ENSMUSG00000057425	NonProperStrand	30	1	-15.3059
chr19	3385346	3385423	protein_coding	Cpt1a	utr3	ENSMUSG00000024900	ProperStrand	48	chr16	23111372	23111447	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.5796
chr18	75160711	75160763	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	chr8	32260335	32260421	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-1.1309
chr15	82980087	82980192	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr9	15119967	15119990	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	5	-8.3140
chr3	30942732	30945402	protein_coding	Prkci	exon	ENSMUSG00000037643	ProperStrand	39	chr9	15119993	15120041	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-8.1149
chr2	80159370	80159470	protein_coding	Dnajc10	exon	ENSMUSG00000027006	ProperStrand	36	chr18	35716848	35716884	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.0537
chr3	80316126	80316144	Low_complexity	GA-rich	Low_complexity	chr3GA-rich80316030	ProperStrand	2	chr2	130103753	130103825	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-15.9458
chr5	150490990	150491080	protein_coding	B3galtl	intron	ENSMUSG00000051950	ProperStrand	29	chr16	23110881	23111452	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0921
chr6	85878900	85878990	protein_coding	Tprkb	utr3	ENSMUSG00000054226	NonProperStrand	3	chr1	58241425	58241515	protein_coding	Aox3	intron	ENSMUSG00000064294	NonProperStrand	1	1	-inf
chr11	120208278	120208299	protein_coding	Actg1	exon	ENSMUSG00000062825	ProperStrand	178	chr11	68886951	68887035	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-2.2004
chr7	48780516	48780533	LTR	RMER13A	ERVK	chr7RMER13A48780447	ProperStrand	15	chr8	72418455	72419145	protein_coding	Ndufa13	exon	ENSMUSG00000036199	ProperStrand	11	1	-19.3937
chr11	14961829	14961849	LINE	Lx	L1	chr11Lx14961726	ProperStrand	93	chr15	79908931	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-4.6247
chr19	44188377	44188477	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr17	6138911	6138928	protein_coding	Tulp4	exon	ENSMUSG00000034377	ProperStrand	164	1	-5.8070
chr19	6364022	6374014	protein_coding	Sf1	utr5	ENSMUSG00000024949	ProperStrand	251	chr18	33954816	33954910	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	12	-19.2625
chr7	117189864	117189922	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr1	90123798	90124639	protein_coding	Heatr7b1	utr5	ENSMUSG00000079429	ProperStrand	147	1	-4.4697
chr3	108236070	108237047	protein_coding	Sars	exon	ENSMUSG00000068739	ProperStrand	45	chr2	32818810	32818890	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-6.0359
chr17	71198889	71199027	protein_coding	Tgif1	utr5	ENSMUSG00000047407	ProperStrand	64	chr2	145076804	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-7.5946
chr2	4974190	4974207	protein_coding	Optn	exon	ENSMUSG00000026672	ProperStrand	451	chr10	80642443	80642628	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-2.3428
chr1	93263065	93263081	protein_coding	Fam132b	exon	ENSMUSG00000047443	NonProperStrand	98	chr2	26494776	26494839	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-4.0197
chr3	85941922	85941943	protein_coding	Rps3a	exon	ENSMUSG00000028081	ProperStrand	177	chr2	28324355	28324372	protein_coding	Mrps2	exon	ENSMUSG00000035772	NonProperStrand	47	1	-11.6356
chr15	72935373	72935443	protein_coding	Eif2c2	utr3	ENSMUSG00000036698	ProperStrand	154	chr16	23109051	23109090	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-5.4256
chr7	151765212	151765228	antisense	Gm10574	.	ENSMUSG00000073778	ProperStrand	357	chr9	64023961	64023983	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	1	-5.1600
chr13	97425886	97425945	protein_coding	Hmgcr	exon	ENSMUSG00000021670	ProperStrand	56	chr1	155287329	155287354	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	1	-9.1177
chr5	124566336	124566353	protein_coding	Arl6ip4	utr5	ENSMUSG00000029404	ProperStrand	29	chr12	106269404	106269445	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-5.5475
chr19	6261807	6261824	protein_coding	Atg2a	exon	ENSMUSG00000024773	ProperStrand	97	chr3	123210941	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.3359
chrX	11653929	11653948	protein_coding	Bcor	intron	ENSMUSG00000040363	NonProperStrand	293	chr1	172967155	172967221	tRNA	tRNA1005-AspGTC	.	130045	ProperStrand	18	6	-20.8409
chr7	89028224	89028268	protein_coding	Tm6sf1	exon	ENSMUSG00000038623	ProperStrand	4	chr4	132100634	132102619	protein_coding	Dnajc8	exon	ENSMUSG00000054405	ProperStrand	22	1	-20.6761
chr10	41171456	41171484	protein_coding	Zbtb24	exon	ENSMUSG00000019826	ProperStrand	17	chr15	79913288	79913347	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-9.8834
chr8	93517752	93517774	protein_coding	Chd9	intron	ENSMUSG00000056608	NonProperStrand	12	chr2	26493366	26493465	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-6.9066
chr17	12410160	12410252	protein_coding	Agpat4	intron	ENSMUSG00000023827	ProperStrand	15	chr1	162965981	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-6.3018
chr15	61254073	61254090	SINE	MIR	MIR	chr15MIR61253971	ProperStrand	1	chr16	23110875	23110911	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
mmu-miR-6239	0	18	miRNA	mmu-miR-6239	.	mmu-miR-6239	ProperStrand	31	chr15	101926875	101926993	protein_coding	Eif4b	utr3	ENSMUSG00000058655	ProperStrand	484	1	-10.4654
chr19	5798929	5798961	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr4	135521534	135521550	protein_coding	Gale	exon	ENSMUSG00000028671	ProperStrand	61	1	-7.5116
chr13	99625106	99625170	protein_coding	Tnpo1	exon	ENSMUSG00000009470	ProperStrand	56	chr2	70927899	70927916	protein_coding	Dcaf17	exon	ENSMUSG00000041966	NonProperStrand	89	1	-12.6612
chr8	97200110	97200127	protein_coding	Pllp	exon	ENSMUSG00000031775	ProperStrand	5	chr16	23110829	23110860	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr2	145077956	145209256	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	chr11	77995212	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-1.2180
chr7	52085920	52085959	protein_coding	Nup62	utr3	ENSMUSG00000043858	ProperStrand	47	chr4	143027927	143028559	protein_coding	Oog4	exon	ENSMUSG00000047799	NonProperStrand	99	1	-12.8009
chrX	134333921	134333942	protein_coding	Il1rapl2	intron	ENSMUSG00000059203	ProperStrand	11	chr16	23110941	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.6241
chr9	43942856	43942875	protein_coding	Mcam	intron	ENSMUSG00000032135	ProperStrand	27	chr7	116663711	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-9.7552
chr15	100358962	100381757	protein_coding	Tfcp2	exon	ENSMUSG00000009733	NonProperStrand	77	chr1	166367669	166367754	protein_coding	Atp1b1	utr3	ENSMUSG00000026576	ProperStrand	67	1	-12.5901
chr8	3610411	3610553	protein_coding	Xab2	exon	ENSMUSG00000019470	ProperStrand	52	chr11	5420674	5420690	protein_coding	Xbp1	utr5	ENSMUSG00000020484	ProperStrand	16	1	-16.3112
chr1	167107523	167107572	protein_coding	Sft2d2	utr3	ENSMUSG00000040848	ProperStrand	25	chr8	129468789	129468879	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	9	-20.1270
chr11	76593204	76593294	protein_coding	Cpd	utr3	ENSMUSG00000020841	ProperStrand	46	chr14	52829466	52829546	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-8.7351
chr4	133407106	133407123	protein_coding	Rps6ka1	exon	ENSMUSG00000003644	NonProperStrand	2	chr6	115758011	115758048	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-12.8899
chr2	145199197	145199214	sense_intronic	Gm14093	.	ENSMUSG00000087158	NonProperStrand	7	chr11	69483135	69483237	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-6.6014
chrX	103342114	103342135	protein_coding	Tlr13	intron	ENSMUSG00000033777	ProperStrand	1	chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-inf
chr13	98709431	98709512	protein_coding	Rgnef	utr3	ENSMUSG00000021662	ProperStrand	30	chr2	22522357	22522375	protein_coding	Gad2	intron	ENSMUSG00000026787	NonProperStrand	7	1	-20.2855
chr13	23830968	23831069	protein_coding	Hist1h1c	exon	ENSMUSG00000036181	NonProperStrand	6	chr13	76155789	76155805	protein_coding	Rfesd	utr5	ENSMUSG00000043190	NonProperStrand	2	2	-inf
chr7	36216443	36216495	protein_coding	Ccdc123	intron	ENSMUSG00000023072	ProperStrand	7	chr17	66468409	66468427	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	2	-inf
chr15	36535610	36538605	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr11	69481335	69481435	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	13	-7.6610
chr14	78989773	78995028	protein_coding	Dgkh	exon	ENSMUSG00000034731	ProperStrand	29	chr16	23111394	23111474	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.3903
chr3	94976743	94976802	protein_coding	Sema6c	exon	ENSMUSG00000038777	ProperStrand	30	chr17	35299541	35299631	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-6.1354
chr7	17545223	17545239	protein_coding	Pnmal1	utr5	ENSMUSG00000041141	NonProperStrand	1	chr4	131908380	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-inf
chr8	82207889	82207919	protein_coding	Abce1	utr3	ENSMUSG00000058355	ProperStrand	66	chr7	116664809	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-4.2313
chr2	90235294	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	60590425	60590441	protein_coding	Top3a	exon	ENSMUSG00000002814	ProperStrand	28	1	-5.9497
chr14	32042378	32042394	protein_coding	Sema3g	utr3	ENSMUSG00000021904	NonProperStrand	47	chr11	62416602	62416657	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-5.6434
chr9	57385425	57385441	protein_coding	2310046O06Rik	utr5	ENSMUSG00000032305	ProperStrand	135	chr2	89368462	89368478	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	1	-8.7339
chr12	110888878	110888948	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr1	173864269	173864285	protein_coding	Slamf6	exon	ENSMUSG00000015314	ProperStrand	17	1	-11.2235
chrX	157314621	157314638	protein_coding	Cdkl5	intron	ENSMUSG00000031292	ProperStrand	5	chr1	36248376	36248404	protein_coding	Uggt1	exon	ENSMUSG00000037470	ProperStrand	67	1	-17.9125
chr1	173341933	173341949	protein_coding	Usf1	utr5	ENSMUSG00000026641	NonProperStrand	144	chr9	72943890	72943955	protein_coding	Rab27a	utr3	ENSMUSG00000032202	ProperStrand	12	1	-14.8403
chr15	82958296	82961989	protein_coding	Poldip3	exon	ENSMUSG00000041815	ProperStrand	57	chr19	8963076	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	4	-8.6703
mmu-miR-6240	1	23	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr4	106120446	106120464	protein_coding	Pcsk9	intron	ENSMUSG00000044254	NonProperStrand	1	1	-inf
chr6	43223902	43223924	protein_coding	Arhgef5	exon	ENSMUSG00000033542	ProperStrand	5	chr16	23111372	23111438	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-5.8178
chr19	34723103	34723119	protein_coding	Ifit1	exon	ENSMUSG00000034459	NonProperStrand	2	chr18	75160712	75160777	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	1	-16.6381
chr7	117166761	117166861	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	chr7	106631294	106631346	snoRNA	ENSMUSG00000065822_Snord15a	.	ENSMUSG00000065822	ProperStrand	128	1	-3.3912
chr5	30922830	30922849	protein_coding	Kcnk3	intron	ENSMUSG00000049265	NonProperStrand	21	chr11	62416574	62416653	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-7.2498
chr12	60141322	60141402	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	chr11	116938572	116938663	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	2	-1.3860
chr18	34605243	34605260	protein_coding	Fam13b	exon	ENSMUSG00000036501	NonProperStrand	22	chr11	6428105	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.0956
chr19	5797639	5797679	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr1	88423524	88425787	protein_coding	Ptma	exon	ENSMUSG00000026238	ProperStrand	385	1	-3.9309
chr5	125599009	125599086	protein_coding	Ncor2	exon	ENSMUSG00000029478	ProperStrand	377	chr14	31827477	31827545	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-3.4107
chr7	28443911	28443927	protein_coding	Map3k10	exon	ENSMUSG00000040390	NonProperStrand	21	chr19	8798484	8798512	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-7.2962
mmu-miR-6240	3	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr18	80637717	80637784	protein_coding	Ctdp1	intron	ENSMUSG00000033323	ProperStrand	69	2	-9.1968
chr1	70167990	70168007	protein_coding	Spag16	intron	ENSMUSG00000053153	NonProperStrand	34	chr18	73693166	73693188	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-6.6464
chr4	41173324	41174306	protein_coding	Ubap2	exon	ENSMUSG00000028433	ProperStrand	292	chr9	120082972	120082991	protein_coding	Mobp	utr3	ENSMUSG00000032517	NonProperStrand	4	1	-15.8086
chr11	60016407	60016431	protein_coding	Srebf1	exon	ENSMUSG00000020538	ProperStrand	24	chr2	157119950	157120991	protein_coding	Rpn2	exon	ENSMUSG00000027642	ProperStrand	363	1	-11.5610
chr4	71082592	71082682	LINE	L1_Mus2	L1	chr4L1_Mus271081430	ProperStrand	1	chr1	89673615	89673695	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-inf
mmu-miR-6238	1	18	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr4	85016349	85016365	protein_coding	Sh3gl2	intron	ENSMUSG00000028488	NonProperStrand	313	1	-7.2370
mmu-miR-6240	3	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr9	21637355	21637371	protein_coding	Dock6	exon	ENSMUSG00000032198	ProperStrand	155	1	-4.0748
chr11	102999765	102999856	protein_coding	Hexim2	exon	ENSMUSG00000043372	ProperStrand	20	chr18	35714153	35714233	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	20	-inf
chr1	188563622	188563690	protein_coding	Rrp15	exon	ENSMUSG00000001305	ProperStrand	16	chr6	94776857	94776875	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	4	-inf
chr19	47808400	47809370	protein_coding	Sfr1	exon	ENSMUSG00000025066	ProperStrand	15	chr10	23506278	23506334	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	2	-15.4906
chr10	79756547	79756614	protein_coding	Rps15	exon	ENSMUSG00000063457	ProperStrand	119	chr4	131908689	131908850	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	6	-5.1200
chr7	147130518	147130584	protein_coding	Utf1	exon	ENSMUSG00000047751	ProperStrand	67	chr4	131908804	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-6.6216
chr13	21872383	21872461	protein_coding	Hist1h1b	utr5	ENSMUSG00000058773	ProperStrand	65	chr2	158185576	158185653	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-6.3277
chr8	23522080	23522100	protein_coding	Mrps31	intron	ENSMUSG00000031533	NonProperStrand	1	chr9	120039533	120039623	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-inf
chrX	148708466	148708524	protein_coding	Kdm5c	utr3	ENSMUSG00000025332	ProperStrand	139	chr10	110918602	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-1.9936
chr17	26879394	26879438	protein_coding	A930001N09Rik	exon	ENSMUSG00000048249	ProperStrand	18	chr10	23505190	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-5.5683
chr8	97170548	97170571	protein_coding	Rspry1	exon	ENSMUSG00000050079	ProperStrand	27	chr15	90979543	90979559	protein_coding	Abcd2	exon	ENSMUSG00000055782	ProperStrand	2	1	-inf
chr9	7992519	7992609	protein_coding	Yap1	intron	ENSMUSG00000053110	ProperStrand	68	chr11	69483196	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.2392
chr4	128757626	128757717	protein_coding	Rnf19b	utr5	ENSMUSG00000028793	ProperStrand	7	chr7	52381847	52381877	protein_coding	Rpl13a	exon	ENSMUSG00000074129	ProperStrand	269	1	-14.7281
chr10	105279674	105279701	protein_coding	Ccdc59	exon	ENSMUSG00000019897	ProperStrand	21	chr2	158185603	158185667	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	2	-13.7119
chr4	73240701	73240781	LINE	L1VL4	L1	chr4L1VL473240671	ProperStrand	1	chr4	73240876	73240966	LINE	Lx	L1	chr4Lx73240877	ProperStrand	1	1	-inf
chr12	29320723	29320743	protein_coding	Rps7	utr5	ENSMUSG00000061477	ProperStrand	129	chr8	129468745	129468819	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	4	-10.3183
chr17	35661095	35661195	protein_coding	Cchcr1	intron	ENSMUSG00000040312	ProperStrand	14	chr15	82725599	82725637	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	1	-11.4801
chr2	152107439	152107468	protein_coding	Csnk2a1	utr3	ENSMUSG00000074698	ProperStrand	91	chr17	24856621	24856651	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-5.6083
chr8	87543548	87543671	protein_coding	Asna1	exon	ENSMUSG00000052456	ProperStrand	25	chr16	23111701	23111799	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.4223
chr15	72825152	72825203	protein_coding	Trappc9	intron	ENSMUSG00000047921	ProperStrand	44	chr7	116663652	116663742	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.0569
chr17	88039742	88039772	protein_coding	Epcam	exon	ENSMUSG00000045394	ProperStrand	43	chrX	34622906	34622990	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	3	-9.3323
chr2	90235286	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chrX	132806349	132806389	protein_coding	Ngfrap1	utr3	ENSMUSG00000046432	ProperStrand	28	2	-9.7134
chr7	135604785	135604885	protein_coding	Tial1	utr5	ENSMUSG00000030846	ProperStrand	25	chr1	162967492	162967509	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-5.1443
chr2	41199972	41199989	protein_coding	Lrp1b	exon	ENSMUSG00000049252	ProperStrand	376	chr9	120039581	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	4	-3.1875
chr9	21823257	21823273	protein_coding	Elavl3	exon	ENSMUSG00000003410	NonProperStrand	137	chr5	108334195	108334254	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-3.2716
chr6	72180855	72180872	protein_coding	Atoh8	intron	ENSMUSG00000037621	NonProperStrand	61	chr19	8798484	8798513	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-5.1794
chr2	91436228	91436335	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	chr11	106362674	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-1.9656
chr11	81767286	81767307	protein_coding	Accn1	intron	ENSMUSG00000020704	ProperStrand	69	chr17	39985500	39985538	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-5.6579
chr11	8407342	8407358	protein_coding	Tns3	intron	ENSMUSG00000020422	ProperStrand	81	chr4	153386496	153389769	protein_coding	Lrrc47	exon	ENSMUSG00000029028	ProperStrand	30	1	-14.1172
chr5	45827548	45827599	protein_coding	Qdpr	intron	ENSMUSG00000015806	ProperStrand	3	chr6	136762698	136762766	protein_coding	Wbp11	utr3	ENSMUSG00000030216	ProperStrand	87	1	-18.9272
chr1	134876650	134876747	LTR	RMER2	ERV1	chr1RMER2134876325	ProperStrand	1	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-inf
chr8	13014869	13014885	protein_coding	Mcf2l	exon	ENSMUSG00000031442	NonProperStrand	35	chr10	84577506	84577567	protein_coding	AI597468	utr3	ENSMUSG00000060935	ProperStrand	8	2	-18.8298
chr8	113340199	113341472	protein_coding	Sf3b3	exon	ENSMUSG00000033732	ProperStrand	181	chr7	150717335	150717415	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-3.4111
chr17	13115738	13115783	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	chr17	35088971	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-0.8923
chr17	35972406	35972465	protein_coding	Tubb5	exon	ENSMUSG00000001525	ProperStrand	624	chr11	120148960	120148976	protein_coding	Bahcc1	exon	ENSMUSG00000039741	NonProperStrand	268	1	-5.6655
chr6	86965613	86969366	protein_coding	Nfu1	exon	ENSMUSG00000029993	ProperStrand	12	chr14	33005144	33005224	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-7.1733
chr18	53890854	53895347	protein_coding	Cep120	exon	ENSMUSG00000048799	ProperStrand	91	chr15	34370546	34370626	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-4.8695
chr12	109923963	109924069	protein_coding	Evl	intron	ENSMUSG00000021262	NonProperStrand	6	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.7876
chr2	73656812	73656832	protein_coding	Atf2	utr3	ENSMUSG00000027104	ProperStrand	37	chr16	23110562	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.3186
chr6	37895574	37895629	protein_coding	Trim24	exon	ENSMUSG00000029833	ProperStrand	27	chr11	101304883	101304908	protein_coding	Rpl27	exon	ENSMUSG00000063316	ProperStrand	96	3	-19.8770
chr14	77587118	77587136	protein_coding	Enox1	intron	ENSMUSG00000022012	NonProperStrand	15	chr6	71832629	71832687	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	2	-13.4456
chr15	95446121	95446137	LTR	RMER19B	ERVK	chr15RMER19B95445803	ProperStrand	7	chrX	71502573	71502632	protein_coding	Emd	exon	ENSMUSG00000001964	ProperStrand	7	1	-20.6103
chr11	106362329	106362346	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	NonProperStrand	6	chr11	69483134	69483194	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-6.9324
chr6	148874631	148877056	protein_coding	Fam60a	exon	ENSMUSG00000039985	ProperStrand	68	chrX	71517831	71517921	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-6.2980
chr17	29108437	29108672	protein_coding	Stk38	utr3	ENSMUSG00000024006	ProperStrand	57	chr7	116664809	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-4.6277
chr7	88315036	88315054	protein_coding	Slc28a1	utr3	ENSMUSG00000025726	NonProperStrand	3	chr4	130305550	130305620	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	1	-16.2970
chr4	57956817	57958022	protein_coding	Txn1	exon	ENSMUSG00000028367	ProperStrand	31	chr11	6428075	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.4276
chr5	74489202	74489288	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr1	136225761	136225778	protein_coding	Ppfia4	exon	ENSMUSG00000026458	ProperStrand	45	1	-6.1882
chr10	126733610	126733955	protein_coding	Mars	exon	ENSMUSG00000040354	ProperStrand	38	chr16	23111453	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.9421
chr17	24343586	24343602	protein_coding	Ntn3	exon	ENSMUSG00000079662	ProperStrand	237	chr8	32260335	32260362	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-2.1516
chr3	85904468	85904568	snoRNA	ENSMUSG00000065847_SNORA32	.	ENSMUSG00000065847	ProperStrand	40	chr19	8963086	8963114	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.9778
mmu-miR-295-5p	4	22	miRNA	mmu-miR-295-5p	.	mmu-miR-295-5p	ProperStrand	3	chr1	162965530	162965588	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-9.4650
chr1	152282965	152283857	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	chr5	119195043	119195123	protein_coding	Med13l	exon	ENSMUSG00000018076	ProperStrand	226	3	-14.3269
chr13	45002914	45008646	protein_coding	Jarid2	exon	ENSMUSG00000038518	ProperStrand	372	chr18	35102297	35102366	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	16	-20.4404
chr1	135635880	135635960	protein_coding	Atp2b4	exon	ENSMUSG00000026463	ProperStrand	42	chr15	34370545	34370635	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-4.2181
chr5	147056129	147056149	protein_coding	Cdk8	intron	ENSMUSG00000029635	NonProperStrand	3	chr16	23110453	23110539	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-8.5395
chr13	69758449	69760533	protein_coding	Nsun2	exon	ENSMUSG00000021595	ProperStrand	110	chr1	162967516	162967538	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	8	-19.9902
chr9	21626214	21648806	protein_coding	Dock6	exon	ENSMUSG00000032198	ProperStrand	155	chr5	74489543	74489673	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	2	-3.7787
chr12	111929633	111929690	protein_coding	Hsp90aa1	utr3	ENSMUSG00000021270	ProperStrand	751	chr9	21609220	21609279	protein_coding	Dock6	exon	ENSMUSG00000032198	ProperStrand	155	3	-14.5470
chr8	91046294	91098161	protein_coding	Nkd1	exon	ENSMUSG00000031661	ProperStrand	57	chr12	106269354	106269434	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-4.2375
chr6	120901325	120901342	protein_coding	Mical3	exon	ENSMUSG00000051586	ProperStrand	104	chr11	106362303	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-4.7734
chrX	132673816	132673833	protein_coding	Bex4	intron	ENSMUSG00000047844	NonProperStrand	70	chr16	43886794	43886877	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	1	-7.7674
chr11	62416575	62416596	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr13	90238601	90238722	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	2	-7.3031
chr15	54697505	54697522	protein_coding	Enpp2	exon	ENSMUSG00000022425	ProperStrand	31	chr4	131908809	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.2342
chr1	136225761	136225778	protein_coding	Ppfia4	exon	ENSMUSG00000026458	ProperStrand	45	chr4	131908236	131908318	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.8531
chr13	58228391	58229384	protein_coding	Hnrnpa0	exon	ENSMUSG00000007836	ProperStrand	110	chr11	97642952	97643087	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-2.8179
chr7	136800631	136800649	SINE	RSINE1	B4	chr7RSINE1136800606	ProperStrand	216	chr1	84692463	84692479	miRNA	Mir5126	.	ENSMUSG00000093254	ProperStrand	15	1	-13.5641
chr3	66100724	66100740	protein_coding	Veph1	utr5	ENSMUSG00000027831	NonProperStrand	92	chr1	162965530	162965555	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.5208
chr13	49218439	49218455	protein_coding	Wnk2	intron	ENSMUSG00000037989	NonProperStrand	67	chr2	26494708	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.9099
chr11	80571453	80571470	protein_coding	Myo1d	intron	ENSMUSG00000035441	NonProperStrand	24	chr1	162965531	162965596	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.0142
chr12	110918155	110918221	snoRNA	ENSMUSG00000065749_AF357428	.	ENSMUSG00000065749	ProperStrand	218	chr8	73419657	73419757	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-1.0818
chr4	131865856	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr9	64022854	64022921	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	11	-1.0261
chr1	174005117	174005133	protein_coding	Ncstn	exon	ENSMUSG00000003458	ProperStrand	20	chr9	120039567	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	3	-12.7920
chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	chr5	108332364	108332399	protein_coding	Rpl5	exon	ENSMUSG00000058558	ProperStrand	235	1	-5.8878
chr9	64819884	64820507	protein_coding	2010321M09Rik	exon	ENSMUSG00000034263	ProperStrand	4	chr13	46765144	46765160	protein_coding	C78339	exon	ENSMUSG00000069237	NonProperStrand	104	1	-18.1468
chr16	87699245	87699288	protein_coding	Bach1	utr5	ENSMUSG00000025612	ProperStrand	32	chr2	144087323	144087413	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-7.8006
chr17	56462458	56462479	protein_coding	Uhrf1	utr3	ENSMUSG00000001228	ProperStrand	229	chr16	23111689	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-0.7264
chr16	15636404	15636423	protein_coding	Mcm4	exon	ENSMUSG00000022673	ProperStrand	51	chr7	30026273	30026289	protein_coding	Yif1b	intron	ENSMUSG00000030588	ProperStrand	154	1	-11.7494
chr2	118611946	118611962	protein_coding	Disp2	exon	ENSMUSG00000040035	NonProperStrand	204	chr9	32067716	32067761	protein_coding	Arhgap32	exon	ENSMUSG00000041444	ProperStrand	37	1	-11.8348
chrX	76426507	76426526	LTR	RLTR1B-int	ERV1	chrXRLTR1B-int76425914	NonProperStrand	4	chr10	23505222	23505279	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-6.2798
chr17	34730994	34731198	protein_coding	Pbx2	exon	ENSMUSG00000034673	ProperStrand	19	chr1	162965548	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.4761
chr6	61280218	61280237	protein_coding	Fam190a	intron	ENSMUSG00000039578	NonProperStrand	24	chr6	136709185	136709201	protein_coding	Gucy2c	exon	ENSMUSG00000042638	NonProperStrand	21	1	-17.2299
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr10	110918644	110918693	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-3.3024
chr2	26493380	26493518	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr1	162968441	162968510	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	10	-9.7714
chr5	118376503	118376519	protein_coding	Nos1	exon	ENSMUSG00000029361	NonProperStrand	237	chr6	119054931	119054949	protein_coding	Cacna1c	intron	ENSMUSG00000051331	ProperStrand	46	1	-11.0944
chr12	3388126	3388145	protein_coding	Kif3c	intron	ENSMUSG00000020668	NonProperStrand	3	chr3	93359009	93359030	protein_coding	S100a10	utr5	ENSMUSG00000041959	NonProperStrand	1	1	-inf
chr3	85941917	85942424	protein_coding	Rps3a	exon	ENSMUSG00000028081	ProperStrand	177	chr1	82472996	82473012	protein_coding	Col4a4	intron	ENSMUSG00000067158	ProperStrand	12	1	-14.4290
chr7	4463878	4465194	protein_coding	Tnnt1	exon	ENSMUSG00000064179	NonProperStrand	4	chr9	120038564	120038672	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	3	-21.1857
chr7	123314192	123314292	protein_coding	Plekha7	exon	ENSMUSG00000045659	ProperStrand	66	chr11	62416578	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	5	-18.9785
chr5	115956842	115956858	protein_coding	Pxn	utr5	ENSMUSG00000029528	ProperStrand	171	chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	1	-9.3349
chr11	106647599	106647647	protein_coding	Ddx5	exon	ENSMUSG00000020719	ProperStrand	181	chr19	8798521	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-5.3845
chr17	25379203	25379252	protein_coding	0610007P22Rik	intron	ENSMUSG00000015126	ProperStrand	6	chr16	23110828	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.7876
chr2	166408660	166408676	protein_coding	Prex1	exon	ENSMUSG00000039621	ProperStrand	20	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-11.1511
chr3	97817679	97851651	protein_coding	Notch2	exon	ENSMUSG00000027878	ProperStrand	86	chr12	32003213	32003230	protein_coding	Gm11053	intron	ENSMUSG00000079147	ProperStrand	12	1	-15.8983
chr14	22613354	22613449	protein_coding	Samd8	utr3	ENSMUSG00000021770	ProperStrand	25	chr5	147646800	147646848	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	1	-9.7229
chr5	44428876	44435567	protein_coding	Prom1	exon	ENSMUSG00000029086	ProperStrand	12	chr15	79908956	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-8.7110
chr12	112112241	112112278	protein_coding	Cinp	exon	ENSMUSG00000021276	ProperStrand	18	chr11	6519817	6519944	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-10.3782
chr3	103562509	103562527	protein_coding	Hipk1	exon	ENSMUSG00000008730	NonProperStrand	9	chr7	117189901	117189978	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	4	-20.2753
chr12	17552938	17553010	protein_coding	Odc1	intron	ENSMUSG00000011179	ProperStrand	173	chrX	149828130	149828146	protein_coding	Klf8	utr3	ENSMUSG00000041649	NonProperStrand	107	1	-10.0272
chr5	108336378	108336431	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	chr12	92811920	92812014	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	2	-1.8144
chr12	25644753	25644814	protein_coding	Mboat2	utr3	ENSMUSG00000020646	ProperStrand	11	chr4	131908256	131908346	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-14.7150
chr1	134018692	134018903	protein_coding	Cdk18	exon	ENSMUSG00000026437	ProperStrand	51	chr1	191058379	191058397	protein_coding	Kcnk2	intron	ENSMUSG00000037624	ProperStrand	56	1	-13.7804
chr19	8700726	8700742	protein_coding	Slc22a6	utr3	ENSMUSG00000024650	ProperStrand	4	chr11	121008670	121008770	protein_coding	Tex19.1	exon	ENSMUSG00000039329	ProperStrand	12	1	-21.0614
chr9	95525016	95525035	antisense	Gm16126	.	ENSMUSG00000086585	NonProperStrand	229	chr17	86508593	86508610	protein_coding	Srbd1	exon	ENSMUSG00000024135	NonProperStrand	12	1	-13.9130
chr8	96704122	96704154	protein_coding	Mt1	utr3	ENSMUSG00000031765	ProperStrand	92	chr1	161270445	161270554	snoRNA	ENSMUSG00000089536_Scarna3a	.	ENSMUSG00000089536	ProperStrand	247	2	-15.1920
chr7	30722693	30723039	protein_coding	Zfp74	exon	ENSMUSG00000059975	ProperStrand	4	chr9	120038613	120038673	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-8.5118
chr5	129528339	129528401	protein_coding	Ran	exon	ENSMUSG00000029430	ProperStrand	82	chr11	98878396	98878430	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-5.6706
chr1	71676314	71676393	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	1	-3.9074
chrX	7146884	7146967	protein_coding	Ppp1r3f	intron	ENSMUSG00000039556	ProperStrand	23	chr4	131908356	131908409	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.9964
chr1	54978896	54978938	protein_coding	Ankrd44	intron	ENSMUSG00000052331	ProperStrand	27	chr16	23111451	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-6.7205
chr5	107119577	107119667	protein_coding-noncoding	Zfp644	utr3	ENSMUSG00000049606	ProperStrand	6	chr11	121779373	121779438	protein_coding	Gm12588	intron	ENSMUSG00000062632	NonProperStrand	6	6	-inf
chr15	76736634	76736688	protein_coding	Rpl8	exon	ENSMUSG00000003970	ProperStrand	191	chr15	97811251	97811267	protein_coding	Col2a1	exon	ENSMUSG00000022483	ProperStrand	34	1	-12.1370
chr11	119136228	119136244	protein_coding	Gaa	exon	ENSMUSG00000025579	NonProperStrand	201	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-2.9493
chr15	98350146	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	chr5	108336363	108336490	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	10	-0.9793
chr5	128076288	128076304	protein_coding	Slc15a4	utr3	ENSMUSG00000029416	ProperStrand	49	chr4	131908417	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.7204
chr9	43947257	43947347	protein_coding	Mcam	exon	ENSMUSG00000032135	ProperStrand	27	chr15	98350152	98350232	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-6.3283
chr13	63615036	63615102	protein_coding	Ptch1	exon	ENSMUSG00000021466	ProperStrand	50	chr9	120038571	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.3693
chrX	7752870	7752886	protein_coding	Tbc1d25	exon	ENSMUSG00000039201	ProperStrand	126	chr11	69483154	69483236	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.2934
chr19	3258473	3258553	LINE	L1_Mus4	L1	chr19L1_Mus43257319	NonProperStrand	1	chr4	14718151	14718241	protein_coding	Lrrc69	intron	ENSMUSG00000023151	ProperStrand	4	1	-inf
chr4	41673405	41673421	protein_coding	Il11ra1	intron	ENSMUSG00000073889	ProperStrand	128	chr8	113362453	113362512	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	1	-7.7517
chr13	48900872	48900890	protein_coding	Phf2	intron	ENSMUSG00000038025	NonProperStrand	4	chr2	75501671	75501688	protein_coding	Hnrnpa3	exon	ENSMUSG00000059005	ProperStrand	289	1	-15.8301
chr4	116826716	116826741	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	chr6	131330342	131330422	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	ProperStrand	408	3	-7.8689
chr11	48613931	48613958	protein_coding	Gnb2l1	utr5	ENSMUSG00000020372	ProperStrand	347	chr4	76614453	76614470	protein_coding	Ptprd	intron	ENSMUSG00000028399	ProperStrand	198	2	-11.8761
chr1	183949942	183950001	protein_coding	Enah	utr5	ENSMUSG00000022995	ProperStrand	196	chr7	150717298	150717348	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	5	-14.0205
chr5	122580412	122584741	protein_coding	Ccdc63	utr5	ENSMUSG00000043036	ProperStrand	120	chr7	29136525	29136581	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.2914
chr19	43579408	43579425	protein_coding	Got1	intron	ENSMUSG00000025190	NonProperStrand	147	chr5	130300419	130300477	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.1330
chr10	85405987	85406074	protein_coding	D10Wsu52e	exon	ENSMUSG00000001783	ProperStrand	45	chr14	76247753	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	3	-11.2520
chr4	104708676	104708736	protein_coding	Prkaa2	utr3	ENSMUSG00000028518	ProperStrand	12	chr5	74489587	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-6.9444
chr13	120260996	120261025	protein_coding	4833420G17Rik	exon	ENSMUSG00000062822	ProperStrand	49	chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	2	-10.1303
chr17	35988054	35989706	protein_coding	Mdc1	intron	ENSMUSG00000061607	ProperStrand	85	chr7	116663714	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	14	-20.2630
chr12	110782764	110782854	lincRNA	Meg3	exon	ENSMUSG00000021268	ProperStrand	61	chr4	133276652	133276732	protein_coding	Arid1a	exon	ENSMUSG00000007880	ProperStrand	465	1	-9.1802
chr4	43505829	43505887	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr4	134384374	134384390	protein_coding	Tmem57	exon	ENSMUSG00000028826	NonProperStrand	10	1	-6.5547
chr9	78327218	78327898	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr12	88778629	88778721	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	2	-1.2441
chr5	101225723	101225740	protein_coding	Helq	exon	ENSMUSG00000035266	ProperStrand	6	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-13.6880
chr7	117189863	117189954	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr1	9932548	9932595	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	7	-11.0527
chr11	5009793	5009878	protein_coding	Emid1	intron	ENSMUSG00000034164	ProperStrand	14	chr15	5068448	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-8.9991
chr2	38596032	38596058	protein_coding	Nr6a1	exon	ENSMUSG00000063972	ProperStrand	52	chr10	110918553	110918643	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-3.7133
chr2	41199972	41199989	protein_coding	Lrp1b	exon	ENSMUSG00000049252	ProperStrand	376	chr6	124665418	124665518	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	1	-3.4056
chr9	15120983	15121083	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	chr19	56418608	56419161	protein_coding	Nrap	exon	ENSMUSG00000049134	ProperStrand	32	1	-10.9758
chr7	87535617	87535644	protein_coding	Furin	exon	ENSMUSG00000030530	ProperStrand	22	chr7	137677145	137677319	protein_coding	Nsmce4a	exon	ENSMUSG00000040331	ProperStrand	14	2	-inf
mmu-miR-3535	0	26	miRNA	mmu-miR-3535	.	mmu-miR-3535	ProperStrand	15	chr1	162965989	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-10.2966
chr6	31399551	31399569	protein_coding	Mkln1	exon	ENSMUSG00000025609	ProperStrand	18	chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	1	-11.5058
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chrX	6951555	6951571	protein_coding	Usp27x	exon	ENSMUSG00000046269	NonProperStrand	36	1	-9.7439
chr2	90235313	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	136344186	136344202	protein_coding	Srrm3	utr3	ENSMUSG00000039860	ProperStrand	41	1	-5.1984
chr11	69266813	69266829	protein_coding	Dnahc2	exon	ENSMUSG00000005237	ProperStrand	95	chr16	23110456	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-3.1606
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	162632490	162632567	protein_coding	Rabgap1l	exon	ENSMUSG00000026721	ProperStrand	44	1	-5.0608
chr9	30957238	30957294	protein_coding	Aplp2	utr3	ENSMUSG00000031996	ProperStrand	172	chrX	83547356	83547372	protein_coding	Mageb4	intron	ENSMUSG00000035427	NonProperStrand	191	1	-8.8806
chr12	82825859	82826720	protein_coding	Map3k9	exon	ENSMUSG00000042724	ProperStrand	92	chr8	113366286	113366333	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	1	-8.3238
chr5	33866762	33866815	Simple_repeat	(TGGG)n	Simple_repeat	chr5(TGGG)n33866698	NonProperStrand	1	chr4	131908705	131908795	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-inf
chr16	8689098	8689114	protein_coding	Usp7	utr3	ENSMUSG00000022710	NonProperStrand	11	chr11	106362330	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-9.2711
chr11	100581379	100581396	protein_coding	Rab5c	utr5	ENSMUSG00000019173	ProperStrand	76	chr15	79913290	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-3.1605
chr8	125626932	125626968	protein_coding-noncoding	Rpl13	utr5	ENSMUSG00000000740	ProperStrand	9	chr19	8799859	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	2	-14.0929
chr19	38911180	38911196	protein_coding	Tbc1d12	utr5	ENSMUSG00000048720	NonProperStrand	2	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-10.5602
chr12	57712546	57712615	protein_coding	Nkx2-9	utr3	ENSMUSG00000058669	ProperStrand	2	chr7	117190023	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-10.6222
chr2	20155244	20155261	protein_coding	Etl4	intron	ENSMUSG00000036617	ProperStrand	86	chr1	30861888	30861911	protein_coding	Phf3	exon	ENSMUSG00000048874	ProperStrand	102	1	-11.5238
chr2	131092416	131092467	protein_coding	Pank2	intron	ENSMUSG00000037514	ProperStrand	14	chr16	23111451	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.7143
chr3	138561330	138561347	protein_coding	Tspan5	exon	ENSMUSG00000028152	NonProperStrand	5	chr2	181316563	181316579	protein_coding	Uckl1	exon	ENSMUSG00000089917	ProperStrand	142	1	-16.7157
chr7	16868197	16869634	protein_coding	Ccdc9	exon	ENSMUSG00000041375	ProperStrand	14	chr2	26493452	26493500	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-6.5906
chr2	168580180	168580280	protein_coding	Sall4	exon	ENSMUSG00000027547	ProperStrand	82	chr1	145626113	145626190	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-8.2039
chr15	10521900	10521980	protein_coding	Rai14	exon	ENSMUSG00000022246	ProperStrand	180	chr7	134671414	134671504	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-5.7006
chr16	8513602	8572938	protein_coding	Abat	utr5	ENSMUSG00000057880	ProperStrand	7	chr9	120039533	120039591	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-12.3703
chr5	143667122	143667309	protein_coding	Actb	exon	ENSMUSG00000029580	ProperStrand	446	chr5	108334271	108336490	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-1.3841
chr9	64022693	64022733	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	3	-1.3298
chr12	80174488	80175612	protein_coding	Plekhh1	exon	ENSMUSG00000060716	ProperStrand	24	chr11	62416624	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	4	-21.1337
chr4	117900424	117903333	protein_coding	Ptprf	exon	ENSMUSG00000033295	ProperStrand	337	chr17	24858007	24858054	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	4	-18.6192
chr7	117147182	117147212	snRNA	ENSMUSG00000065389_U1	.	ENSMUSG00000065389	ProperStrand	12	chr1	72290887	72290978	snRNA	ENSMUSG00000093111_AC120136.1	.	ENSMUSG00000093111	ProperStrand	137	4	-19.9085
chr11	68616347	68616437	protein_coding	Myh10	exon	ENSMUSG00000020900	ProperStrand	91	chr7	116664819	116664899	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.8616
chr8	32239595	32239611	protein_coding	Rnf122	utr3	ENSMUSG00000039328	NonProperStrand	42	chr18	35714145	35714235	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	4	-13.3499
chr7	52302403	52302503	protein_coding	Prr12	exon	ENSMUSG00000046574	ProperStrand	86	chr5	121655099	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.0891
chr12	85350481	85350499	protein_coding	Acot1	utr5	ENSMUSG00000072949	ProperStrand	72	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-7.5527
chrX	71145998	71146016	protein_coding	Arhgap4	exon	ENSMUSG00000031389	NonProperStrand	18	chr3	30950725	30950743	protein_coding	Prkci	utr3	ENSMUSG00000037643	ProperStrand	39	1	-16.5649
chr8	13876201	13876231	protein_coding	Zfp828	intron	ENSMUSG00000047710	ProperStrand	32	chr18	35716684	35716734	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-5.6246
chr1	173433177	173433277	protein_coding	B930036N10Rik	utr3	ENSMUSG00000091993	ProperStrand	150	chr4	131908687	131908808	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	6	-3.9350
chr10	59762228	59762261	protein_coding	Psap	exon	ENSMUSG00000004207	ProperStrand	124	chr6	100178819	100178886	protein_coding	Rybp	utr3	ENSMUSG00000072872	ProperStrand	51	1	-12.1846
chr9	36593557	36593629	protein_coding	Ei24	exon	ENSMUSG00000062762	ProperStrand	25	chr15	79908934	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-7.2107
chr15	102266586	102266675	protein_coding	Sp1	utr3	ENSMUSG00000001280	ProperStrand	124	chr19	42086786	42086803	protein_coding	Ubtd1	intron	ENSMUSG00000025171	NonProperStrand	9	6	-22.3217
chr17	34740192	34740292	protein_coding	Rnf5	intron	ENSMUSG00000015478	ProperStrand	4	chr1	162967489	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-8.9926
mmu-miR-2137	0	19	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	3	-5.6303
chr11	76063953	76063969	protein_coding	Rnmtl1	utr3	ENSMUSG00000038046	ProperStrand	2	chr17	35299551	35299641	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-12.1680
chr11	98862335	98862407	protein_coding	Top2a	exon	ENSMUSG00000020914	ProperStrand	324	chr2	156133557	156133657	protein_coding	Phf20	utr3	ENSMUSG00000038116	ProperStrand	60	1	-9.9341
chr12	112615159	112615231	protein_coding	Cdc42bpb	intron	ENSMUSG00000021279	ProperStrand	128	chr5	130300534	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.3203
chr5	145948042	145948061	protein_coding	Atp5j2	exon	ENSMUSG00000038690	ProperStrand	10	chr1	88252838	88252901	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	2	-16.3654
chr8	98270015	98270095	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	chr7	134671414	134671504	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-0.8959
chr17	53623235	53623252	protein_coding	Rab5a	utr5	ENSMUSG00000017831	ProperStrand	44	chr5	115939535	115939569	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-8.4868
chr5	42136455	42136473	Low_complexity	GA-rich	Low_complexity	chr5GA-rich42136449	NonProperStrand	106	chr2	26768403	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-4.5012
chr5	35246013	35246034	protein_coding	Htt	exon	ENSMUSG00000029104	ProperStrand	73	chr5	74489595	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	3	-8.5298
chr7	17591412	17591481	protein_coding	Ppp5c	exon	ENSMUSG00000003099	ProperStrand	9	chr3	123210905	123210933	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.6210
chr3	87719867	87719904	protein_coding	Hdgf	utr3	ENSMUSG00000004897	ProperStrand	117	chr7	118219575	118219623	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-2.9432
chr1	181683086	181683167	protein_coding	Ahctf1	exon	ENSMUSG00000026491	ProperStrand	39	chr7	118219574	118219616	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	4	-15.6372
chr4	154023804	154023822	lincRNA	Gm13110	intron	ENSMUSG00000086810	NonProperStrand	5	chr15	65656195	65656215	protein_coding	Efr3a	exon	ENSMUSG00000015002	ProperStrand	8	1	-18.7911
chr12	3968611	3968627	protein_coding	Efr3b	exon	ENSMUSG00000020658	ProperStrand	142	chr7	52382234	52382315	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-6.5715
chr11	111408875	111408965	Low_complexity	CT-rich	Low_complexity	chr11CT-rich111408836	ProperStrand	1	chr10	29421565	29421643	Simple_repeat	(CAGAGA)n	Simple_repeat	chr10(CAGAGA)n29421533	NonProperStrand	1	1	-inf
chr6	29306636	29326232	protein_coding	Calu	exon	ENSMUSG00000029767	ProperStrand	47	chr16	23110911	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	11	-14.9785
chr19	8963183	8963220	miRNA	Mir5136	.	ENSMUSG00000093314	ProperStrand	45	chr2	143815376	143815394	protein_coding	Rrbp1	exon	ENSMUSG00000027422	ProperStrand	76	2	-inf
chr2	148232999	148233016	protein_coding	Thbd	exon	ENSMUSG00000074743	ProperStrand	4	chr19	8799836	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	2	-17.0627
chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr14	63287577	63287611	snoRNA	ENSMUSG00000089531_SNORA73	.	ENSMUSG00000089531	ProperStrand	123	2	-3.5535
chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr1	88247740	88247876	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	20	-1.0082
chr10	114956872	114956891	protein_coding	Lgr5	intron	ENSMUSG00000020140	NonProperStrand	13	chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	1	-12.6029
chr16	11144149	11144230	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr5	147646728	147646818	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	NonProperStrand	1	1	-inf
chr15	102539688	102539893	protein_coding	Calcoco1	exon	ENSMUSG00000023055	ProperStrand	29	chr12	58164701	58164718	protein_coding	Slc25a21	intron	ENSMUSG00000035472	ProperStrand	8	1	-18.6963
chr6	143429775	143429793	LINE	L1MA4	L1	chr6L1MA4143429728	ProperStrand	39	chr4	57154472	57154489	protein_coding	Epb4.1l4b	intron	ENSMUSG00000028434	NonProperStrand	54	1	-14.3960
chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	2	-1.2581
chr14	31381507	31381539	protein_coding	Tkt	exon	ENSMUSG00000021957	ProperStrand	160	chr10	23505559	23505621	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-5.6144
chr11	59592249	59592265	protein_coding	Mprip	utr3	ENSMUSG00000005417	ProperStrand	58	chrX	84483696	84483713	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-8.3169
chr17	95160908	95218243	protein_coding	2610044O15Rik	exon	ENSMUSG00000066057	NonProperStrand	70	chr7	116663634	116663770	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-6.0672
chr4	55431651	55431667	lincRNA	Gm12505	exon	ENSMUSG00000087070	ProperStrand	447	chr11	97528157	97528438	protein_coding	Mllt6	exon	ENSMUSG00000038437	ProperStrand	110	1	-8.0798
chr11	29633675	29633765	protein_coding	Rtn4	exon	ENSMUSG00000020458	ProperStrand	117	chr19	8963096	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.2521
chr17	24197263	24210178	protein_coding	Kctd5	exon	ENSMUSG00000016946	ProperStrand	17	chr9	15119650	15119730	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.9895
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr3	89354340	89354357	protein_coding	Kcnn3	intron	ENSMUSG00000000794	NonProperStrand	38	1	-5.3470
chr1	162965576	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr5	108333573	108333592	snoRNA	ENSMUSG00000064453_Snord21	.	ENSMUSG00000064453	ProperStrand	201	3	-3.9053
chr8	127160214	127160288	protein_coding	2310022B05Rik	utr3	ENSMUSG00000031983	ProperStrand	10	chr19	8798509	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-8.8233
chr1	39605589	39605679	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	chr12	106269314	106269558	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	4	-1.1020
chr13	58503982	58503998	protein_coding	Rmi1	utr5	ENSMUSG00000035367	ProperStrand	23	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.0979
chr4	97812275	97812291	protein_coding	Nfia	intron	ENSMUSG00000028565	NonProperStrand	74	chr14	76247753	76247842	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-3.7782
chr3	69293600	69293617	protein_coding	Ppm1l	intron	ENSMUSG00000027784	NonProperStrand	29	chr3	88715213	88715230	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-8.6932
chrX	123447247	123447267	LINE	Lx	L1	chrXLx123447240	ProperStrand	11	chr11	6428142	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-6.4917
chr4	79650072	79650121	pseudogene	Gm11410	.	ENSMUSG00000083219	ProperStrand	47	chr8	129468789	129468879	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	4	-15.3275
chr6	71342082	71342105	protein_coding	Rmnd5a	utr3	ENSMUSG00000002222	ProperStrand	38	chr10	39978426	39978485	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	2	-10.3170
chr6	57774905	57774922	protein_coding	Vopp1	intron	ENSMUSG00000037788	NonProperStrand	21	chr7	29136525	29136553	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.2792
chr17	5107667	5107712	protein_coding	Arid1b	intron	ENSMUSG00000069729	ProperStrand	28	chr17	35299511	35299611	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-6.2728
chr2	128761089	128761121	protein_coding	Zc3h8	exon	ENSMUSG00000027387	ProperStrand	4	chr4	126545990	126546105	protein_coding	Zmym4	exon	ENSMUSG00000042446	ProperStrand	94	1	-17.8441
chr10	126917967	126918067	protein_coding	R3hdm2	intron	ENSMUSG00000025404	ProperStrand	33	chr9	15118274	15118328	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-4.5950
chr5	148113281	148113297	protein_coding	Cdx2	utr3	ENSMUSG00000029646	ProperStrand	276	chr14	31827480	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	2	-6.6866
chr16	22822196	22822263	protein_coding	Tbccd1	exon	ENSMUSG00000004462	ProperStrand	3	chr4	116275532	116276582	protein_coding	Nasp	exon	ENSMUSG00000028693	ProperStrand	64	1	-20.1417
chr16	48925133	48925197	protein_coding	Dzip3	utr3	ENSMUSG00000064061	ProperStrand	10	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-7.6230
chr4	131865463	131865494	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	chr4	3762227	3762293	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	2	-1.8089
chr1	162965529	162965601	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr5	108334195	108336490	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	24	-1.2174
chr12	27874148	27874164	LTR	ORR1E	MaLR	chr12ORR1E27874117	NonProperStrand	27	chr16	23111375	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.5132
chr5	24007635	24007695	protein_coding	Agap3	utr3	ENSMUSG00000023353	ProperStrand	39	chr19	8963083	8963173	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.0232
chr3	107878465	107878565	protein_coding	Ampd2	exon	ENSMUSG00000027889	ProperStrand	10	chr4	131908689	131908751	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.3231
chr16	23111483	23111506	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr7	133520557	133520684	protein_coding	Spns1	utr5	ENSMUSG00000030741	ProperStrand	9	1	-12.8990
chr15	93072899	93072927	protein_coding	Gxylt1	utr3	ENSMUSG00000036197	ProperStrand	12	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.2811
chr12	73805024	73805046	LINE	L1ME3B	L1	chr12L1ME3B73805010	ProperStrand	9	chr10	23505152	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-11.3309
chr3	73240639	73240729	LTR	ORR1A3-int	MaLR	chr3ORR1A3-int73240518	NonProperStrand	1	chr3	73240498	73240588	LTR	RLTR25A	ERVK	chr3RLTR25A73240086	NonProperStrand	1	1	-inf
chr16	35984149	35984166	protein_coding	Kpna1	intron	ENSMUSG00000022905	ProperStrand	38	chr1	154943481	154943530	protein_coding	Nmnat2	intron	ENSMUSG00000042751	ProperStrand	39	1	-15.0988
chr16	8858429	8858479	protein_coding	1810013L24Rik	utr3	ENSMUSG00000022507	ProperStrand	20	chr16	23111387	23111477	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.0472
chr1	187165148	187169197	protein_coding	Bpnt1	exon	ENSMUSG00000026617	ProperStrand	15	chr2	119120130	119120146	protein_coding	Vps18	exon	ENSMUSG00000034216	NonProperStrand	40	1	-17.0745
chr11	66839432	66843475	protein_coding	Tmem220	exon	ENSMUSG00000050270	ProperStrand	4	chr10	23505149	23505203	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-6.2798
chr10	6240159	6243284	protein_coding	Mthfd1l	exon	ENSMUSG00000040675	ProperStrand	50	chr5	74489618	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	3	-10.0121
chr5	106242102	106242167	protein_coding	Lrrc8d	exon	ENSMUSG00000046079	ProperStrand	40	chr18	35716835	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-4.9926
chr11	97023817	97032896	protein_coding	Kpnb1	utr3	ENSMUSG00000001440	ProperStrand	197	chr4	131865856	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-1.4715
chr4	43505767	43505847	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr16	17849732	17849822	protein_coding	Dgcr2	exon	ENSMUSG00000003166	ProperStrand	45	1	-3.5955
chr17	25022429	25022447	protein_coding	Nubp2	exon	ENSMUSG00000039183	ProperStrand	8	chr4	131908357	131908417	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-5.0428
chr2	90235300	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr16	10990057	10990074	protein_coding	Litaf	intron	ENSMUSG00000022500	ProperStrand	25	1	-6.1754
chr7	149562324	149562371	protein_coding	Ctsd	utr3	ENSMUSG00000007891	ProperStrand	60	chr7	148634754	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-3.9861
chr14	65673211	65673246	protein_coding	Extl3	utr3	ENSMUSG00000021978	ProperStrand	36	chr14	124353869	124353886	protein_coding	Itgbl1	exon	ENSMUSG00000032925	ProperStrand	159	1	-12.3888
chr13	19684241	19684257	protein_coding	Epdr1	utr3	ENSMUSG00000002808	ProperStrand	46	chrX	34622906	34622957	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-3.6584
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr10	12911953	12912017	protein_coding	Ltv1	exon	ENSMUSG00000019814	ProperStrand	76	1	-5.9034
chrX	34395160	34395213	protein_coding-noncoding	C330007P06Rik	utr3	ENSMUSG00000006423	ProperStrand	1	chr17	35088957	35089015	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-inf
chr2	165909483	165909931	protein_coding	Sulf2	exon	ENSMUSG00000006800	ProperStrand	171	chr19	8963073	8963163	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-0.7794
chr11	35103616	35148607	protein_coding	Slit3	intron	ENSMUSG00000056427	NonProperStrand	45	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-3.9969
chr17	38135046	38135096	LTR	RLTR21	ERVK	chr17RLTR2138135059	ProperStrand	1	chr16	23111748	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-inf
chr6	114704985	114705075	protein_coding	Atg7	intron	ENSMUSG00000030314	NonProperStrand	7	chr7	116664840	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	NonProperStrand	12	1	-21.2490
chr6	124810680	124810696	protein_coding	Gpr162	exon	ENSMUSG00000038390	NonProperStrand	40	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-4.3134
chr8	74894641	74894741	protein_coding	Eps15l1	intron	ENSMUSG00000006276	ProperStrand	42	chr2	166890522	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-8.2715
chr16	91419957	91420047	protein_coding-noncoding	Il10rb	utr5	ENSMUSG00000022969	ProperStrand	1	chr16	91419620	91419710	protein_coding	Il10rb	exon	ENSMUSG00000022969	ProperStrand	19	1	-inf
chr2	44844628	44844644	protein_coding	Zeb2	exon	ENSMUSG00000026872	ProperStrand	12	chr4	131866156	131866246	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-6.8239
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	115757991	115758122	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	11	-1.9943
chr16	49132180	49132197	protein_coding	Myh15	exon	ENSMUSG00000092009	ProperStrand	9	chr7	116664816	116664916	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-6.1874
chr19	25490790	25490807	protein_coding	Kank1	intron	ENSMUSG00000032702	ProperStrand	218	chr11	85580387	85580406	protein_coding	Bcas3	intron	ENSMUSG00000059439	ProperStrand	20	1	-12.9530
chr4	116371853	116371891	protein_coding	Prdx1	utr3	ENSMUSG00000028691	ProperStrand	41	chr2	130101986	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-6.1048
chr15	76736367	76736578	protein_coding	Rpl8	exon	ENSMUSG00000003970	ProperStrand	191	chr8	73115775	73115791	protein_coding	Ell	utr3	ENSMUSG00000070002	NonProperStrand	134	1	-9.3791
chr6	85086849	85086878	protein_coding	Spr	exon	ENSMUSG00000033735	ProperStrand	2	chr19	22974441	22974458	protein_coding	Trpm3	intron	ENSMUSG00000052387	NonProperStrand	16	1	-inf
chr16	56015704	56015739	protein_coding	Pcnp	utr3	ENSMUSG00000071533	NonProperStrand	4	chr16	23110967	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-12.7696
chr12	113015024	113015116	protein_coding	Klc1	exon	ENSMUSG00000021288	ProperStrand	35	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-9.2424
chr10	3731951	3731975	LINE	L1Md_F2	L1	chr10L1Md_F23731947	ProperStrand	1	chr18	35716832	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-inf
chr6	120884450	120884530	protein_coding	Mical3	utr3	ENSMUSG00000051586	ProperStrand	104	chr8	73419657	73419747	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.1792
chr15	38224316	38224377	protein_coding	Klf10	utr3	ENSMUSG00000037465	ProperStrand	33	chr1	162968484	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	4	-19.3007
chr3	137849424	137849440	protein_coding	4930579F01Rik	utr5	ENSMUSG00000012042	NonProperStrand	156	chr7	29136525	29136548	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-0.9495
chr5	134714250	134714340	protein_coding	Gtf2i	utr3	ENSMUSG00000060261	ProperStrand	41	chr16	23111416	23111496	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.8215
chr3	90285534	90285583	protein_coding	Ilf2	intron	ENSMUSG00000001016	ProperStrand	28	chr15	79913288	79913346	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-5.0460
chr4	118151885	118151902	protein_coding-noncoding	Tie1	utr3	ENSMUSG00000033191	ProperStrand	3	chr7	34987342	34987386	protein_coding	Gpi1	utr3	ENSMUSG00000036427	ProperStrand	288	1	-16.5573
chr15	55428915	55428932	protein_coding	Mtbp	exon	ENSMUSG00000022369	NonProperStrand	2	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-15.2057
chrX	140754463	140759209	protein_coding	Alg13	exon	ENSMUSG00000041718	ProperStrand	45	chr16	23110889	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-4.6179
chr4	26196339	26196429	LINE	Lx4B	L1	chr4Lx4B26196288	ProperStrand	1	chr4	26196215	26196295	LINE	Lx9	L1	chr4Lx926195846	ProperStrand	1	1	-inf
chr14	87907943	87907960	protein_coding	Tdrd3	intron	ENSMUSG00000022019	ProperStrand	19	chr14	76247765	76247808	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-6.4242
chr16	91621800	91621890	protein_coding	Gart	utr3	ENSMUSG00000022962	ProperStrand	200	chr1	187225450	187225490	protein_coding	Eprs	exon	ENSMUSG00000026615	ProperStrand	149	8	-inf
chr4	153410349	153410365	protein_coding	Ccdc27	exon	ENSMUSG00000039492	ProperStrand	94	chr11	120243873	120243895	protein_coding	Nploc4	exon	ENSMUSG00000039703	ProperStrand	44	1	-13.0367
chr11	85023532	85023580	protein_coding	Appbp2	exon	ENSMUSG00000018481	ProperStrand	15	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-10.9917
chrX	100767009	100767025	non_coding	B230206F22Rik	.	ENSMUSG00000086370	NonProperStrand	20	chr13	96100639	96100699	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	1	-10.2885
chr2	130329890	130329934	protein_coding	Ptpra	exon	ENSMUSG00000027303	ProperStrand	24	chr16	23111705	23111795	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.4982
chr2	72134872	72134889	protein_coding	B230120H23Rik	intron	ENSMUSG00000004085	NonProperStrand	26	chr4	139027656	139027706	protein_coding	Ubr4	exon	ENSMUSG00000066036	ProperStrand	304	1	-11.7524
chr19	24169454	24169539	protein_coding	Tjp2	utr3	ENSMUSG00000024812	ProperStrand	63	chr9	114700746	114700767	protein_coding	Cmtm8	intron	ENSMUSG00000041012	ProperStrand	3	2	-inf
chr19	53715400	53715588	protein_coding	Smc3	exon	ENSMUSG00000024974	ProperStrand	61	chr16	94605625	94605673	protein_coding	Ttc3	exon	ENSMUSG00000040785	ProperStrand	47	11	-inf
chr11	116704532	116704549	protein_coding	Jmjd6	utr5	ENSMUSG00000056962	ProperStrand	92	chr9	120038466	120038552	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	4	-8.4488
chr10	90432659	90432680	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	chr1	90123798	90124639	protein_coding	Heatr7b1	utr5	ENSMUSG00000079429	ProperStrand	147	1	-8.8235
chr10	39978369	39978474	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	chr1	9932550	9932625	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	2	-1.5676
chr6	85137654	85137672	protein_coding	Emx1	utr5	ENSMUSG00000033726	ProperStrand	6	chr11	106362640	106362692	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-12.1528
chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	chr8	79444417	79444434	protein_coding	Nr3c2	intron	ENSMUSG00000031618	ProperStrand	23	1	-14.4953
chr14	45949538	45949554	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	chr11	69483212	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-0.6997
chr2	26493362	26493482	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr15	98350143	98350279	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	25	-3.2979
chr15	96428104	96428127	protein_coding	Slc38a1	intron	ENSMUSG00000023169	ProperStrand	69	chr4	63240338	63240355	protein_coding	6330416G13Rik	intron	ENSMUSG00000045917	NonProperStrand	23	1	-14.9606
chr5	34112034	34112050	protein_coding	Letm1	exon	ENSMUSG00000005299	NonProperStrand	145	chr17	24342578	24342594	protein_coding	Ntn3	utr3	ENSMUSG00000079662	ProperStrand	237	1	-8.7911
chr8	96826103	96827500	protein_coding	Nup93	exon	ENSMUSG00000032939	ProperStrand	43	chr5	67344915	67344984	protein_coding	Limch1	exon	ENSMUSG00000037736	ProperStrand	20	2	-21.8463
chr2	32881629	32881645	protein_coding	Garnl3	exon	ENSMUSG00000038860	NonProperStrand	54	chr11	30715645	30715702	protein_coding	Psme4	exon	ENSMUSG00000040850	ProperStrand	40	1	-14.3523
chr17	88384856	88384904	protein_coding	Msh6	exon	ENSMUSG00000005370	ProperStrand	150	chr18	20123591	20123608	protein_coding	Dsc3	intron	ENSMUSG00000059898	ProperStrand	31	1	-12.8078
chr7	52690508	52690611	protein_coding	Ruvbl2	utr5	ENSMUSG00000003868	ProperStrand	41	chr17	24857802	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.9570
chr7	16527649	16528140	protein_coding	Gltscr2	exon	ENSMUSG00000041560	ProperStrand	127	chr10	23505246	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-2.5428
chr18	63908609	63908625	protein_coding	Wdr7	intron	ENSMUSG00000040560	NonProperStrand	180	chr9	120039533	120039620	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.4885
chr8	73292976	73293066	protein_coding	Pik3r2	exon	ENSMUSG00000031834	ProperStrand	22	chr1	89673567	89673647	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-5.1717
chr17	24856620	24856720	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	chr3	90279822	90279859	tRNA	tRNA792-MetCAT	.	620246	ProperStrand	42	1	-7.1361
chr10	68578220	68578239	LTR	MT2A	ERVL	chr10MT2A68577899	ProperStrand	21	chr3	153575089	153575168	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	3	-20.3876
chr11	116535916	116535984	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr2	29787070	29787160	protein_coding	Odf2	utr3	ENSMUSG00000026790	ProperStrand	58	1	-5.9774
chr1	173433203	173433293	protein_coding	B930036N10Rik	utr3	ENSMUSG00000091993	ProperStrand	150	chr8	113366278	113366332	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	1	-7.3512
chr9	80328957	80328976	protein_coding	Impg1	exon	ENSMUSG00000032343	ProperStrand	7	chr16	23111451	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-5.0992
chr17	13112504	13112587	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	chr7	106631408	106631442	snoRNA	ENSMUSG00000065822_Snord15a	.	ENSMUSG00000065822	ProperStrand	128	3	-7.9902
chr18	44587071	44587087	protein_coding	Mcc	utr3	ENSMUSG00000071856	NonProperStrand	8	chr4	131908236	131908341	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-12.4254
chr8	82299850	82299879	protein_coding	Anapc10	utr3	ENSMUSG00000036977	ProperStrand	11	chr17	24857794	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-9.1031
chr6	122269360	122269460	protein_coding	Phc1	exon	ENSMUSG00000040669	ProperStrand	158	chr1	162967515	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-1.8136
chr14	33141077	33158116	protein_coding	Ogdhl	exon	ENSMUSG00000021913	ProperStrand	182	chr16	23110828	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	7	-0.7487
chr16	23111373	23111463	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	chr1	139630952	139630981	snoRNA	ENSMUSG00000088715_SNORA17	.	ENSMUSG00000088715	ProperStrand	3	3	-inf
chr16	22023828	22026720	protein_coding	Senp2	exon	ENSMUSG00000022855	ProperStrand	13	chr18	33954820	33954910	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-6.4885
chr14	62254598	62254638	lincRNA	Dleu2	intron	ENSMUSG00000087313	ProperStrand	2	chr16	23110535	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-9.6327
chr2	128511637	128511737	protein_coding	Anapc1	exon	ENSMUSG00000014355	ProperStrand	38	chr10	23506278	23506346	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-7.8599
chr11	6428075	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr2	144087324	144087440	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	10	-1.0254
chr8	112606892	112606982	protein_coding	Zfp612	intron	ENSMUSG00000044676	ProperStrand	7	chr11	69481397	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-7.4495
chr16	23113334	23113424	protein_coding	Eif4a2	utr3	ENSMUSG00000022884	ProperStrand	356	chr8	125823920	125824000	protein_coding	Fanca	exon	ENSMUSG00000032815	ProperStrand	32	1	-11.0147
chr19	38869531	38869547	protein_coding	Noc3l	exon	ENSMUSG00000024999	NonProperStrand	149	chr3	35815124	35815164	protein_coding	Dcun1d1	intron	ENSMUSG00000027708	ProperStrand	14	1	-14.4617
chr2	90235315	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr13	51654819	51654836	protein_coding	Shc3	intron	ENSMUSG00000021448	ProperStrand	50	1	-4.8130
chr11	106860691	106860769	protein_coding	Kpna2	utr5	ENSMUSG00000018362	ProperStrand	70	chr10	23505152	23505190	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.0304
chr9	83678799	83681878	protein_coding	Elovl4	exon	ENSMUSG00000032262	ProperStrand	159	chr10	90581034	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-2.9927
chrX	34337157	34337186	protein_coding	Slc25a5	exon	ENSMUSG00000016319	ProperStrand	55	chr1	88247816	88247835	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-5.2661
chr11	32611956	32620513	protein_coding	Fbxw11	exon	ENSMUSG00000020271	ProperStrand	36	chr7	29136585	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.2650
chr19	8800381	8800471	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	NonProperStrand	18	chr6	125071802	125071886	snoRNA	ENSMUSG00000088208_SCARNA11	.	ENSMUSG00000088208	NonProperStrand	1	1	-inf
chr14	37691817	37691889	protein_coding	Gcap14	utr3	ENSMUSG00000058690	ProperStrand	10	chr19	8963116	8963175	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.6521
chr8	125626838	125626867	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	1	-6.5276
chr17	46555781	46555798	protein_coding	Zfp318	intron	ENSMUSG00000015597	ProperStrand	44	chr6	124665408	124665508	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	1	-7.5524
chr15	101754849	101754865	protein_coding	Krt4	exon	ENSMUSG00000059668	ProperStrand	45	chr12	110874223	110874256	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	1	-10.5571
chr5	100855902	100855934	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr7	13615671	13615873	protein_coding	Trim28	exon	ENSMUSG00000005566	ProperStrand	296	1	-3.5682
chr4	133683806	133683848	protein_coding-noncoding	Sh3bgrl3	utr3	ENSMUSG00000028843	ProperStrand	1	chr11	116535936	116535982	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	1	-inf
chr6	117795659	117795676	protein_coding	Zfp637	exon	ENSMUSG00000059689	NonProperStrand	53	chr17	13115655	13115718	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	1	-7.7813
chr16	36723177	36723230	protein_coding	Ildr1	intron	ENSMUSG00000022900	ProperStrand	17	chr4	131865943	131865987	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.9909
chr12	106002200	106002217	protein_coding	Clmn	utr3	ENSMUSG00000021097	ProperStrand	50	chr5	130300419	130300477	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.8268
chr7	87536712	87536734	protein_coding	Furin	exon	ENSMUSG00000030530	ProperStrand	22	chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	1	-11.5195
chr7	116663659	116663749	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	NonProperStrand	51	chr10	23505150	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	NonProperStrand	45	1	-14.2233
chr7	105241584	105241647	protein_coding	Myo7a	intron	ENSMUSG00000030761	NonProperStrand	33	chr19	8963023	8963123	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-5.7142
chr4	118793203	118809896	protein_coding	Slc2a1	exon	ENSMUSG00000028645	ProperStrand	361	chr9	15118325	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	11	-15.6073
chr1	173345644	173345669	protein_coding	Usf1	exon	ENSMUSG00000026641	ProperStrand	30	chrX	6951750	6951766	protein_coding	Usp27x	exon	ENSMUSG00000046269	ProperStrand	5	1	-19.3173
chr3	142457137	142457357	protein_coding	Pkn2	exon	ENSMUSG00000004591	ProperStrand	28	chr18	13004286	13004304	protein_coding	Osbpl1a	intron	ENSMUSG00000044252	ProperStrand	39	1	-15.7023
chr12	114290175	114290191	protein_coding	Pacs2	intron	ENSMUSG00000021143	NonProperStrand	302	chr3	97950745	97950824	protein_coding	Notch2	exon	ENSMUSG00000027878	ProperStrand	86	1	-9.3521
chr15	79249601	79251033	protein_coding	Csnk1e	utr3	ENSMUSG00000022433	ProperStrand	59	chr17	35088957	35089011	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	2	-9.6103
chr16	20654983	20655003	protein_coding	Psmd2	exon	ENSMUSG00000006998	ProperStrand	99	chr7	116663658	116663758	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.6976
chr17	66273077	66273167	protein_coding	Twsg1	utr3	ENSMUSG00000024098	ProperStrand	22	chr10	110918555	110918635	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-8.8518
chr11	4980922	4985906	protein_coding	Ewsr1	exon	ENSMUSG00000009079	ProperStrand	248	chr5	130300425	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	6	-5.5697
chr4	130302913	130302993	protein_coding	Pum1	exon	ENSMUSG00000028580	ProperStrand	131	chr2	26493368	26493458	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-2.3528
chr4	118955390	118955470	protein_coding	Ybx1	exon	ENSMUSG00000028639	ProperStrand	171	chr5	115939521	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-5.7943
chr7	112629988	112630005	protein_coding	Prkcdbp	intron	ENSMUSG00000037060	NonProperStrand	43	chr7	123476603	123477216	protein_coding	Rps13	exon	ENSMUSG00000090862	ProperStrand	36	1	-15.0220
chr16	5256015	5256031	protein_coding	Fam86	utr5	ENSMUSG00000022544	ProperStrand	231	chr3	130429862	130431673	protein_coding	Rpl34	exon	ENSMUSG00000062006	ProperStrand	51	1	-10.9377
chr1	181458917	181459004	protein_coding	Tfb2m	utr3	ENSMUSG00000026492	ProperStrand	5	chr12	60141350	60141412	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-11.9762
chr7	151765212	151765228	antisense	Gm10574	.	ENSMUSG00000073778	ProperStrand	357	chr5	143664822	143664854	protein_coding	Actb	utr3	ENSMUSG00000029580	ProperStrand	446	1	-5.7607
chr3	89750435	89750451	protein_coding	Atp8b2	exon	ENSMUSG00000060671	ProperStrand	140	chr1	9932554	9932604	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-6.0519
chr19	6230429	6230533	protein_coding	Ppp2r5b	exon	ENSMUSG00000024777	ProperStrand	4	chr16	23110959	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.6489
chr4	74843493	74843509	LINE	Lx9	L1	chr4Lx974843264	NonProperStrand	30	chr17	13112450	13112529	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-5.9331
chr18	36961598	36961663	misc_RNA	Vault	.	ENSMUSG00000065145	ProperStrand	177	chr15	79542532	79542632	protein_coding	Gtpbp1	exon	ENSMUSG00000042535	ProperStrand	56	1	-11.2818
chr2	164796661	164796679	protein_coding	Slc12a5	intron	ENSMUSG00000017740	NonProperStrand	40	chr19	7053106	7053156	protein_coding	Fkbp2	exon	ENSMUSG00000056629	ProperStrand	18	1	-16.5296
chr11	48615576	48615609	snoRNA	ENSMUSG00000064725_Snord96a	.	ENSMUSG00000064725	ProperStrand	89	chr1	162967515	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	4	-9.7238
chr7	105241578	105241630	protein_coding	Myo7a	intron	ENSMUSG00000030761	NonProperStrand	33	chr2	25125240	25125258	protein_coding	Tprn	utr3	ENSMUSG00000048707	ProperStrand	18	1	-16.8246
chr4	55431688	55431705	lincRNA	Gm12505	exon	ENSMUSG00000087070	ProperStrand	447	chr15	79748666	79748746	protein_coding	Cbx7	utr3	ENSMUSG00000053411	ProperStrand	62	1	-9.2263
chr5	115940316	115940364	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	chr10	110918552	110918651	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	7	-4.9626
chr11	101272099	101272147	protein_coding	Aarsd1	exon	ENSMUSG00000075528	ProperStrand	30	chr9	120038638	120038672	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.3284
chr4	55545114	55545204	protein_coding	Klf4	utr5	ENSMUSG00000003032	ProperStrand	64	chr9	120038578	120038668	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.9240
chr5	100855902	100855973	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr11	95821091	95821149	protein_coding	Igf2bp1	utr3	ENSMUSG00000013415	ProperStrand	140	1	-4.9799
chr2	145199197	145199214	sense_intronic	Gm14093	.	ENSMUSG00000087158	NonProperStrand	7	chr11	55296209	55296275	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-10.5753
chr15	82687470	82687570	protein_coding	Tcf20	exon	ENSMUSG00000041852	ProperStrand	658	chr19	8798769	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-0.8301
chr10	75188108	75188352	protein_coding	Cabin1	exon	ENSMUSG00000020196	ProperStrand	62	chr3	123210858	123210936	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.0132
chr18	10726045	10726063	protein_coding	Mib1	utr5	ENSMUSG00000024294	ProperStrand	27	chr1	88252837	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-8.2389
chr18	54062530	54062546	protein_coding	Csnk1g3	exon	ENSMUSG00000073563	ProperStrand	13	chr11	6428060	6428089	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-6.1494
chr11	75309867	75309918	protein_coding	Prpf8	utr3	ENSMUSG00000020850	ProperStrand	255	chr17	41083999	41084073	protein_coding	Mut	exon	ENSMUSG00000023921	ProperStrand	20	3	-19.7317
chr19	46078293	46078393	protein_coding	Hps6	exon	ENSMUSG00000074811	ProperStrand	56	chr1	63225678	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-6.8050
chr13	96250654	96250677	LINE	L2b	L2	chr13L2b96250565	NonProperStrand	1	chr5	92889912	92889957	protein_coding	Scarb2	exon	ENSMUSG00000029426	ProperStrand	30	1	-inf
chr3	88705527	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr9	15118283	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	14	-6.9713
chr13	84420969	84421059	protein_coding	Tmem161b	intron	ENSMUSG00000035762	ProperStrand	22	chr12	55797777	55797857	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	1	-9.7208
chr4	151757043	151757061	protein_coding	Chd5	exon	ENSMUSG00000005045	ProperStrand	51	chr17	35087894	35087942	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-5.5173
chr19	44220686	44220704	protein_coding	Bloc1s2	intron	ENSMUSG00000057506	ProperStrand	9	chr2	130101259	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-10.4559
chr15	79913287	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr10	30530998	30531020	tRNA	tRNA81-GluCTC	.	1082935	ProperStrand	154	1	-1.9550
chr12	102080660	102080750	protein_coding	9030617O03Rik	intron	ENSMUSG00000021185	NonProperStrand	5	chr18	52942746	52942838	protein_coding	Sncaip	intron	ENSMUSG00000024534	ProperStrand	5	1	-19.0779
chr2	158182213	158182293	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	chr15	57978207	57978297	snoRNA	ENSMUSG00000080461_SNORA11	.	ENSMUSG00000080461	ProperStrand	171	2	-5.2427
chr14	102095183	102095209	protein_coding	Uchl3	utr3	ENSMUSG00000022111	ProperStrand	12	chr14	52701465	52701489	protein_coding	Hnrnpc	exon	ENSMUSG00000060373	ProperStrand	75	1	-16.1752
chr6	47738066	47738122	misc_RNA	Y_RNA	.	ENSMUSG00000065701	ProperStrand	129	chr4	137298404	137298422	protein_coding	Alpl	exon	ENSMUSG00000028766	ProperStrand	80	2	-17.5238
chr1	12658116	12658206	lincRNA	Gm17644	exon	ENSMUSG00000066918	NonProperStrand	37	chr7	29136565	29136645	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	12	-19.6874
chr1	36615148	36615164	protein_coding	Sema4c	utr5	ENSMUSG00000026121	NonProperStrand	5	chr9	59518522	59519440	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	1	-12.3304
chr4	21786448	21793153	protein_coding	Sfrs18	exon	ENSMUSG00000028248	ProperStrand	36	chr16	23110887	23111001	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-7.4626
chr4	106109439	106111413	protein_coding	Usp24	exon	ENSMUSG00000028514	ProperStrand	74	chr12	66262875	66262954	protein_coding	Mis18bp1	utr5	ENSMUSG00000047534	ProperStrand	4	1	-18.7497
chr11	95926525	95926542	protein_coding	Ube2z	exon	ENSMUSG00000014349	ProperStrand	41	chr7	29136573	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.0293
chr9	40612421	40612552	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr9	108192911	108192928	protein_coding	Nicn1	exon	ENSMUSG00000032606	ProperStrand	12	1	-11.4149
chrX	140773167	140773247	protein_coding	Alg13	intron	ENSMUSG00000041718	ProperStrand	45	chr18	35714176	35714266	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-3.9783
chr4	46182621	46182686	protein_coding	Ncbp1	intron	ENSMUSG00000028330	ProperStrand	21	chr16	23110478	23110568	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-7.3655
chr5	80455380	80455397	LTR	ORR1D2-int	MaLR	chr5ORR1D2-int80455127	NonProperStrand	4	chr4	131908810	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-6.2660
chr7	134359437	134359464	protein_coding	Sept1	exon	ENSMUSG00000000486	ProperStrand	7	chr4	56910496	56910628	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-10.5007
chr15	98604924	98606960	protein_coding	Wnt10b	exon	ENSMUSG00000022996	NonProperStrand	189	chr9	78326563	78326582	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-4.1148
chr3	156224612	156224628	lincRNA	4930570G19Rik	exon	ENSMUSG00000085084	ProperStrand	326	chr17	71990923	71990999	snoRNA	ENSMUSG00000092713_CT010429.1	.	ENSMUSG00000092713	ProperStrand	182	1	-7.7048
chr11	97579950	97579966	protein_coding	Pip4k2b	utr3	ENSMUSG00000018547	NonProperStrand	10	chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	1	-16.2059
chr2	26767738	26767787	protein_coding-noncoding	Rpl7a	utr5	ENSMUSG00000062647	ProperStrand	53	chr15	98350193	98350283	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	3	-11.8050
chr11	69550865	69551048	protein_coding	Polr2a	exon	ENSMUSG00000005198	ProperStrand	200	chr5	147646411	147646477	snoRNA	ENSMUSG00000077185_SNORD102	.	ENSMUSG00000077185	ProperStrand	142	1	-9.1713
chr13	93209562	93209578	protein_coding	Ankrd34b	exon	ENSMUSG00000045034	NonProperStrand	28	chr9	15118323	15118368	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-4.9141
chr6	114260511	114260527	protein_coding	Slc6a1	exon	ENSMUSG00000030310	NonProperStrand	147	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-2.1962
chr1	93827440	93827530	protein_coding	Hdac4	utr5	ENSMUSG00000073617	NonProperStrand	2	chr13	96100551	96100641	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	NonProperStrand	8	1	-19.9311
chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	chr7	117189863	117189944	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-3.1363
chrX	96245892	96245908	protein_coding	Stard8	intron	ENSMUSG00000031216	ProperStrand	142	chr11	62416601	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-5.9988
chr7	36331867	36331885	SINE	RSINE1	B4	chr7RSINE136331860	NonProperStrand	11	chr5	54389949	54389966	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	1	-14.2452
chr15	82583500	82583517	LINE	Lx3B	L1	chr15Lx3B82583070	NonProperStrand	3	chr17	39985411	39985458	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-12.2652
chr19	38869531	38869547	protein_coding	Noc3l	exon	ENSMUSG00000024999	NonProperStrand	149	chr5	108336363	108336408	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-5.4500
chr5	11170836	11170855	LINE	Lx7	L1	chr5Lx711170787	ProperStrand	2	chr12	110881047	110881114	lincRNA	Rian	intron	ENSMUSG00000091793	ProperStrand	612	1	-16.1547
chr10	80641942	80645063	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr12	88778631	88778731	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	3	-1.8148
chr2	26493366	26493473	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr2	26768049	26768119	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	8	-6.1152
chrX	55284279	55284336	protein_coding	Zic3	utr5	ENSMUSG00000067860	ProperStrand	21	chrX	34622906	34622964	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-5.1646
chr13	9833569	9833615	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr5	115254332	115254380	protein_coding	Ankrd13a	exon	ENSMUSG00000041870	ProperStrand	22	1	-6.9384
chr9	40611422	40611459	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr17	12875578	12875681	protein_coding	Igf2r	utr3	ENSMUSG00000023830	ProperStrand	151	2	-10.2100
chr11	103072607	103072624	protein_coding	4933400C05Rik	intron	ENSMUSG00000044787	ProperStrand	4	chr4	131908810	131908864	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-inf
chr6	70794802	70794819	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chr12	30604781	30604797	protein_coding	Myt1l	exon	ENSMUSG00000061911	ProperStrand	38	1	-12.3433
chr3	153575089	153575107	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	chr4	128859054	128859140	protein_coding	S100pbp	exon	ENSMUSG00000040928	ProperStrand	12	1	-11.7738
chr11	100275659	100275677	protein_coding	Leprel4	exon	ENSMUSG00000006931	ProperStrand	32	chr2	69752476	69752521	protein_coding	Ubr3	exon	ENSMUSG00000044308	ProperStrand	62	1	-14.5281
chr9	41784820	41784879	protein_coding	Sorl1	intron	ENSMUSG00000049313	ProperStrand	112	chr18	35716848	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-5.3455
chr2	90235302	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	95079427	95079443	protein_coding	Kbtbd8	utr3	ENSMUSG00000030031	ProperStrand	26	1	-6.0972
chr3	32490098	32492082	protein_coding	Gnb4	exon	ENSMUSG00000027669	ProperStrand	10	chr16	23110829	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-10.6073
chr16	19545717	19545807	LINE	L1Md_T	L1	chr16L1Md_T19543371	NonProperStrand	1	chr7	54443162	54443252	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	1	-inf
chr7	123477420	123477454	protein_coding	Rps13	exon	ENSMUSG00000090862	ProperStrand	36	chr2	158185530	158185564	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-7.5039
chr17	39979976	39980011	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr7	117189865	117189909	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-0.9135
chr6	113088116	113093609	protein_coding	Setd5	exon	ENSMUSG00000034269	ProperStrand	162	chr2	26494708	26494798	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.4708
chr14	78910150	78910240	protein_coding	Akap11	exon	ENSMUSG00000022016	ProperStrand	44	chr12	112779156	112779236	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-5.3783
chr3	153575089	153575169	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	chr18	35714145	35714262	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	7	-4.2729
chr11	68802175	68806897	protein_coding	Pfas	exon	ENSMUSG00000020899	ProperStrand	53	chr16	23110923	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-0.9890
chr2	180469397	180469497	protein_coding	Slc17a9	intron	ENSMUSG00000023393	ProperStrand	7	chr4	131866206	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-12.9358
chr12	113975537	113976053	protein_coding	AW555464	exon	ENSMUSG00000072825	ProperStrand	96	chr11	106362671	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-6.4723
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr4	152856778	152856794	protein_coding	Ajap1	utr5	ENSMUSG00000039546	ProperStrand	51	1	-9.1168
chr5	117732680	117732751	protein_coding	Pebp1	utr3	ENSMUSG00000032959	ProperStrand	54	chr5	34234244	34234262	protein_coding	Whsc1	utr5	ENSMUSG00000057406	ProperStrand	409	1	-9.6811
chr5	34695341	34695368	protein_coding	Rnf4	utr3	ENSMUSG00000029110	ProperStrand	27	chr15	34370543	34370643	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-5.0720
chr16	12360074	12360092	LTR	IAPLTR2b	ERVK	chr16IAPLTR2b12359785	NonProperStrand	28	chr17	24857716	24857772	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.6557
chr3	101393818	101394389	protein_coding	Atp1a1	exon	ENSMUSG00000033161	ProperStrand	316	chr7	117166738	117166817	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-1.8473
chr5	136707644	136707661	protein_coding	Sh2b2	exon	ENSMUSG00000005057	NonProperStrand	101	chr19	8799024	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-4.8199
chr8	11612801	11612817	protein_coding	Ankrd10	exon	ENSMUSG00000031508	ProperStrand	32	chr13	54782887	54782945	protein_coding	Rnf44	utr3	ENSMUSG00000034928	ProperStrand	90	2	-21.1868
chr15	98604924	98606960	protein_coding	Wnt10b	exon	ENSMUSG00000022996	NonProperStrand	189	chr7	116664793	116664850	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-0.8504
chr8	86519899	86519989	protein_coding	Prkaca	utr3	ENSMUSG00000005469	ProperStrand	17	chr5	130300416	130300496	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.8548
chr8	113527676	113527776	protein_coding	Ddx19b	utr3	ENSMUSG00000033658	ProperStrand	30	chr1	162967514	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.7879
chr8	53066786	53066876	LTR	MTA_Mm	MaLR	chr8MTA_Mm53066554	ProperStrand	1	chr8	53066991	53067071	LTR	RLTR23	ERV1	chr8RLTR2353066980	NonProperStrand	1	1	-inf
chr5	34984091	34986624	protein_coding	Nop14	exon	ENSMUSG00000036693	ProperStrand	35	chr3	68889056	68889136	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	2	-7.1450
chr5	100855902	100855943	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr12	101653398	101653498	protein_coding	Ttc7b	exon	ENSMUSG00000033530	ProperStrand	49	6	-inf
chr7	86598749	86598832	protein_coding	Polg	exon	ENSMUSG00000039176	ProperStrand	93	chr1	88247743	88247815	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-4.2563
chr16	57391724	57391786	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr11	6428065	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	NonProperStrand	91	1	-9.4698
chr5	121655125	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	chr4	130305548	130305625	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	2	-1.9627
chr9	61761136	61761160	protein_coding	Rplp1	exon	ENSMUSG00000007892	ProperStrand	116	chr18	35716848	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.1777
chr9	40610151	40612586	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr7	117189899	117190062	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	4	-1.0236
chr11	87240290	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	chr11	62418021	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-3.3605
chr9	40611602	40611902	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr16	43886849	43886929	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	1	-3.0887
chr10	80611390	80611490	protein_coding	Zbtb7a	utr3	ENSMUSG00000035011	ProperStrand	39	chr1	162967535	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.2823
chr9	99383590	99384441	protein_coding	Armc8	exon	ENSMUSG00000032468	ProperStrand	15	chr7	117189865	117189955	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-6.0110
chr1	46132993	46133030	protein_coding	Dnahc7b	intron	ENSMUSG00000041144	ProperStrand	8	chr10	23505179	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	NonProperStrand	45	1	-17.8233
chr18	78017577	78017830	protein_coding	Atp5a1	exon	ENSMUSG00000025428	ProperStrand	254	chr16	36912369	36912421	protein_coding	Golgb1	exon	ENSMUSG00000034243	ProperStrand	92	3	-19.6556
chr16	23084505	23084595	LINE	Lx6	L1	chr16Lx623084178	ProperStrand	1	chr16	23084873	23084963	SINE	B1_Mus1	Alu	chr16B1_Mus123084860	ProperStrand	1	1	-inf
chr19	5799989	5800011	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr8	113142621	113142721	protein_coding	Vac14	utr5	ENSMUSG00000010936	ProperStrand	27	1	-9.1504
chr17	4082540	4082569	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr14	46082414	46082431	protein_coding	Fermt2	intron	ENSMUSG00000037712	NonProperStrand	5	1	-15.1251
chr18	34792145	34792187	protein_coding	Kif20a	exon	ENSMUSG00000003779	ProperStrand	50	chr3	123210854	123210972	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.3689
chr10	74524205	74524221	protein_coding	Bcr	exon	ENSMUSG00000009681	NonProperStrand	23	chr4	143027927	143028559	protein_coding	Oog4	exon	ENSMUSG00000047799	NonProperStrand	99	1	-14.2491
chr11	101183875	101183917	protein_coding	Psme3	utr3	ENSMUSG00000078652	ProperStrand	17	chr9	120038638	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.4412
chr15	34064103	34064140	protein_coding	Mtdh	exon	ENSMUSG00000022255	ProperStrand	37	chr1	16091983	16092011	protein_coding	Rpl7	exon	ENSMUSG00000043716	ProperStrand	93	1	-13.4101
chr2	63936035	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr5	130295419	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	6	-6.5054
chrX	39176456	39176556	protein_coding-noncoding	Thoc2	utr3	ENSMUSG00000037475	ProperStrand	2	chr16	23110971	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-inf
chr6	93127321	93127338	lincRNA	9530026P05Rik	intron	ENSMUSG00000087573	ProperStrand	51	chrX	148437499	148437522	protein_coding	Hsd17b10	intron	ENSMUSG00000025260	ProperStrand	10	1	-17.3736
chr15	99608980	99609048	protein_coding	Lima1	utr3	ENSMUSG00000023022	ProperStrand	159	chr19	8798739	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-2.9870
chr2	30165538	30168149	protein_coding	Nup188	exon	ENSMUSG00000052533	ProperStrand	96	chr11	97642994	97643074	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.7088
chr2	164937262	164937278	protein_coding	Cdh22	utr3	ENSMUSG00000053166	NonProperStrand	7	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.7768
chr19	6985390	6985480	protein_coding	Trmt112	utr3	ENSMUSG00000038812	ProperStrand	6	chr7	117166722	117166802	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-9.5066
chr8	89262125	89262225	protein_coding	Siah1a	intron	ENSMUSG00000036840	ProperStrand	6	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-8.2103
chr19	41970608	41970624	protein_coding	Rrp12	utr5	ENSMUSG00000035049	ProperStrand	106	chr1	93263065	93263081	protein_coding	Fam132b	exon	ENSMUSG00000047443	NonProperStrand	98	1	-11.1842
chr5	121655016	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	chr11	98878344	98878461	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	17	-6.4273
chr2	5545027	5545085	protein_coding	Camk1d	intron	ENSMUSG00000039145	ProperStrand	50	chr16	23110829	23110861	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.0847
chr9	120040002	120040196	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	chr9	30877333	30877364	protein_coding	Zbtb44	utr3	ENSMUSG00000047412	ProperStrand	68	3	-19.5801
chr9	15119967	15120031	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	chr1	162968465	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	2	-1.7197
chr5	70582707	70582725	SINE	B4A	B4	chr5B4A70582657	ProperStrand	1	chr17	46687959	46688513	protein_coding	Srf	exon	ENSMUSG00000015605	ProperStrand	11	1	-inf
chr2	154472258	154472274	protein_coding	Zfp341	utr3	ENSMUSG00000059842	NonProperStrand	7	chr12	92452065	92452142	protein_coding	4930534B04Rik	exon	ENSMUSG00000061533	ProperStrand	14	1	-inf
chr7	28146782	28146798	protein_coding	Spnb4	exon	ENSMUSG00000011751	NonProperStrand	84	chr8	129468746	129468826	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-3.7794
chr13	104902156	104902176	protein_coding	Sgtb	intron	ENSMUSG00000042743	ProperStrand	60	chr9	120038466	120038552	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.0390
chr7	119934448	119934484	protein_coding	Tead1	intron	ENSMUSG00000055320	ProperStrand	217	chr8	32260374	32260423	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	3	-6.1309
chr9	108399418	108400246	protein_coding	Usp19	exon	ENSMUSG00000006676	ProperStrand	57	chr19	8799054	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-5.9334
chr8	103101905	103101985	LINE	Lx2	L1	chr8Lx2103101202	NonProperStrand	1	chrX	85233907	85233997	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	ProperStrand	18	1	-inf
chrX	131139985	131140075	protein_coding	Hnrnph2	exon	ENSMUSG00000045427	ProperStrand	111	chr5	130295452	130295532	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-4.0702
chr8	15106443	15106459	protein_coding	Myom2	exon	ENSMUSG00000031461	ProperStrand	7	chr11	6428076	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-7.4403
chr2	164630656	164630674	protein_coding	Zswim3	utr5	ENSMUSG00000045822	NonProperStrand	16	chr11	48614367	48614434	snoRNA	ENSMUSG00000064500_SNORD95	.	ENSMUSG00000064500	ProperStrand	100	1	-14.9871
chr14	31814436	31814481	protein_coding	Spcs1	exon	ENSMUSG00000021917	ProperStrand	1	chrX	34622906	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-inf
chr2	158185570	158185653	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr12	112779148	112779253	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	7	-2.7539
chr11	99972715	99972736	lincRNA	Gm12347	intron	ENSMUSG00000086702	ProperStrand	4	chr4	131908236	131908299	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-inf
chr5	89383967	89457318	protein_coding	Slc4a4	exon	ENSMUSG00000060961	NonProperStrand	195	chr2	63936035	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-5.5342
chr15	77776045	77776107	protein_coding	Foxred2	exon	ENSMUSG00000016552	ProperStrand	8	chr4	116311596	116311696	protein_coding	Akr1a1	exon	ENSMUSG00000028692	ProperStrand	35	1	-18.0824
chr17	28437666	28437682	protein_coding	Ppard	utr3	ENSMUSG00000002250	ProperStrand	25	chr11	77996560	77996623	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-7.8401
chrX	72345828	72354460	protein_coding	Dkc1	exon	ENSMUSG00000031403	ProperStrand	89	chr16	23110539	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-3.3233
chr10	25606863	25606880	LTR	BGLII_B	ERVK	chr10BGLII_B25606681	ProperStrand	1	chr14	76247753	76247835	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-inf
chr2	121949513	121949530	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	chr5	135857386	135857469	protein_coding	Pom121	exon	ENSMUSG00000053293	ProperStrand	127	1	-8.7959
chr2	121760836	121760861	protein_coding	Casc4	utr3	ENSMUSG00000060227	ProperStrand	18	chr10	23505155	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.2069
chr15	79538221	79538238	protein_coding	Gtpbp1	exon	ENSMUSG00000042535	NonProperStrand	3	chr11	106362638	106362671	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-13.7636
chr8	127222921	127222977	protein_coding	Ttc13	intron	ENSMUSG00000037300	ProperStrand	20	chr5	74489563	74489653	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-5.9076
chr10	120709244	120712786	protein_coding	Tbc1d30	exon	ENSMUSG00000052302	ProperStrand	233	chr14	31829440	31829467	snoRNA	ENSMUSG00000077797_Snord19	.	ENSMUSG00000077797	ProperStrand	62	1	-10.5271
chr4	55431651	55431668	lincRNA	Gm12505	exon	ENSMUSG00000087070	ProperStrand	447	chr4	130305550	130305623	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	2	-9.6236
chr7	133721423	133722696	protein_coding	Cln3	exon	ENSMUSG00000030720	ProperStrand	87	chr1	162966813	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	2	-9.0413
chr16	91729702	91729721	protein_coding	Itsn1	utr5	ENSMUSG00000022957	ProperStrand	172	chr3	68889029	68889147	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-1.5049
chr15	34370652	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	chr15	57978174	57978264	snoRNA	ENSMUSG00000080461_SNORA11	.	ENSMUSG00000080461	ProperStrand	171	2	-3.2170
chr2	90235287	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	69481331	69481480	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	32	-1.6926
chr2	155375874	155376117	protein_coding	Acss2	exon	ENSMUSG00000027605	ProperStrand	11	chr9	15119646	15119736	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	8	-21.8555
chr18	34772910	34772940	protein_coding	Brd8	exon	ENSMUSG00000003778	ProperStrand	27	chr7	117189864	117189912	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	2	-12.5075
chr15	10504979	10504995	protein_coding	Rai14	exon	ENSMUSG00000022246	ProperStrand	180	chr14	56159294	56159311	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	1	-8.7384
chr13	100199701	100199769	protein_coding	Mtap1b	exon	ENSMUSG00000052727	ProperStrand	76	chr15	79913288	79913338	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-3.1605
chr9	121547719	121547736	protein_coding	Lyzl4	intron	ENSMUSG00000032530	NonProperStrand	10	chr4	131865855	131865927	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.0395
chr14	10646781	10646800	protein_coding	Fhit	intron	ENSMUSG00000060579	NonProperStrand	51	chr4	131908696	131908753	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.4523
chr12	82605604	82611875	protein_coding	Gm20498	exon	ENSMUSG00000021139	ProperStrand	5	chr16	23110906	23110996	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr13	59932957	59932973	LINE	L1_Mur3	L1	chr13L1_Mur359932072	ProperStrand	32	chr6	113397999	113398048	protein_coding	Jagn1	utr3	ENSMUSG00000051256	ProperStrand	2	1	-inf
chr6	117793319	117793352	protein_coding	Zfp637	utr5	ENSMUSG00000059689	ProperStrand	3	chr10	110918564	110918595	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	3	-inf
chr3	130937021	130937092	protein_coding	Hadh	utr3	ENSMUSG00000027984	ProperStrand	35	chr2	145077954	145209253	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-8.8052
chr8	13416897	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr5	125316615	125316632	protein_coding	Ccdc92	exon	ENSMUSG00000037979	ProperStrand	45	1	-7.0257
chr5	31262356	31262416	protein_coding	Preb	exon	ENSMUSG00000045302	ProperStrand	4	chr1	162965534	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-8.7752
chr1	88247743	88247799	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	chr4	3762249	3762293	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	5	-8.7550
chr4	151880533	151880550	protein_coding	Nphp4	exon	ENSMUSG00000039577	NonProperStrand	3	chr11	69483189	69483279	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-8.5256
chrX	20259295	20259571	protein_coding	Uba1	exon	ENSMUSG00000001924	ProperStrand	156	chr13	17808440	17808467	protein_coding	Cdk13	utr3	ENSMUSG00000041297	NonProperStrand	2	1	-19.9734
chr15	80043806	80043822	protein_coding	Mgat3	utr3	ENSMUSG00000042428	ProperStrand	14	chr11	6428108	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.9988
chr9	58068234	58068334	protein_coding	Pml	exon	ENSMUSG00000036986	ProperStrand	45	chr7	29136575	29136653	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.8631
chr17	25376902	25377006	protein_coding	Gnptg	exon	ENSMUSG00000035521	NonProperStrand	2	chr11	6428087	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-10.4671
chr16	3948964	3948980	protein_coding	Nlrc3	exon	ENSMUSG00000049871	ProperStrand	5	chr16	23111701	23111754	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-6.6731
chr2	20665479	20665540	protein_coding	Etl4	exon	ENSMUSG00000036617	ProperStrand	86	chr14	57204539	57204555	protein_coding	Parp4	exon	ENSMUSG00000054509	NonProperStrand	113	1	-11.3189
chr10	76597586	76597603	protein_coding	Col18a1	intron	ENSMUSG00000001435	NonProperStrand	7	chr11	6428102	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-7.4403
chr14	87659491	87659512	LTR	MTEa	MaLR	chr14MTEa87659331	NonProperStrand	83	chr11	6428060	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.6179
chr7	67125760	67125824	snoRNA	ENSMUSG00000089375_Snord107	.	ENSMUSG00000089375	ProperStrand	451	chr3	123210852	123210955	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	5	-1.1407
chr2	75499734	75499809	protein_coding	Hnrnpa3	exon	ENSMUSG00000059005	ProperStrand	289	chr2	63936035	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	2	-7.8873
chr1	102076739	102076780	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	chr12	60141414	60141509	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-3.1275
chr15	99433433	99433452	protein_coding	Aqp6	exon	ENSMUSG00000043144	NonProperStrand	45	chr10	107800804	107800854	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	2	-13.7553
chr7	95266597	95266613	protein_coding	Grm5	intron	ENSMUSG00000049583	NonProperStrand	145	chr5	121655016	121655126	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	3	-5.9044
chr1	17600968	17601048	protein_coding	Pi15	intron	ENSMUSG00000067780	NonProperStrand	1	chr2	140132860	140132950	protein_coding	Sel1l2	intron	ENSMUSG00000074764	NonProperStrand	52	1	-inf
chr13	112216887	112216916	protein_coding	Gpbp1	intron	ENSMUSG00000032745	ProperStrand	85	chr10	23505151	23505235	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-2.7107
chr2	74520714	74520732	protein_coding	Hoxd11	exon	ENSMUSG00000042499	NonProperStrand	7	chr8	129468746	129468830	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-8.7511
chr11	51420205	51420221	protein_coding	Hnrnpab	utr5	ENSMUSG00000020358	NonProperStrand	4	chr8	72322769	72322829	protein_coding	Atp13a1	exon	ENSMUSG00000031862	ProperStrand	75	1	-18.3794
chr1	63102973	63103063	protein_coding	Ino80d	utr3	ENSMUSG00000040865	ProperStrand	70	chr2	26494722	26494802	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.8325
chr6	54592901	54593015	protein_coding	Plekha8	utr3	ENSMUSG00000005225	ProperStrand	21	chr13	30338191	30338207	protein_coding	Mboat1	utr3	ENSMUSG00000038732	NonProperStrand	148	1	-13.6271
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr12	17552961	17553071	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	5	-6.3961
chr2	56968378	56968396	protein_coding	Nr4a2	intron	ENSMUSG00000026826	ProperStrand	24	chr14	52694818	52694948	protein_coding	Hnrnpc	exon	ENSMUSG00000060373	ProperStrand	75	1	-14.7204
chr5	100855902	100855940	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr5	143667253	143667313	protein_coding	Actb	exon	ENSMUSG00000029580	ProperStrand	446	1	-2.8322
chr11	39966967	39967047	lincRNA	Gm12132	intron	ENSMUSG00000085301	NonProperStrand	2	chr10	59549603	59549693	protein_coding	Ascc1	intron	ENSMUSG00000044475	ProperStrand	18	1	-21.6032
chr1	72895858	72896141	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	chr7	134341340	134341357	protein_coding	Tbc1d10b	utr3	ENSMUSG00000042492	ProperStrand	187	1	-7.2165
chr13	62944660	62944677	protein_coding	Fbp2	intron	ENSMUSG00000021456	ProperStrand	100	chrX	98643472	98643513	protein_coding	Nono	utr3	ENSMUSG00000031311	ProperStrand	102	1	-11.2210
chr4	134211461	134211482	protein_coding	Man1c1	intron	ENSMUSG00000037306	ProperStrand	22	chr7	55898793	55898810	protein_coding	Mrgprb3	exon	ENSMUSG00000070546	ProperStrand	1	1	-inf
chr10	12902322	12902670	protein_coding	Ltv1	exon	ENSMUSG00000019814	ProperStrand	76	chr11	62416967	62417019	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-5.5793
chr8	87368588	87368651	protein_coding	Calr	exon	ENSMUSG00000003814	ProperStrand	232	chr18	33954856	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-1.2746
chr3	53461233	53461251	protein_coding	Frem2	utr5	ENSMUSG00000037016	NonProperStrand	11	chr17	24857717	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-5.4831
chr12	88061332	88061422	protein_coding	Angel1	exon	ENSMUSG00000021257	ProperStrand	12	chr4	131866155	131866235	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-6.8239
chr7	119253511	119253611	protein_coding	Usp47	exon	ENSMUSG00000059263	ProperStrand	40	chr2	130102057	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-6.1537
chr12	86106248	86106316	protein_coding	Npc2	exon	ENSMUSG00000021242	ProperStrand	29	chr17	24856620	24856670	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-7.8795
chr2	90235315	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	141170388	141170501	antisense	AI507597	.	ENSMUSG00000073731	ProperStrand	28	1	-5.9497
chrX	98643369	98643459	protein_coding	Nono	utr3	ENSMUSG00000031311	ProperStrand	102	chr11	6428084	6428164	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.2683
chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	chr1	162968442	162968496	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-2.4697
chr11	60519850	60519980	protein_coding	Llgl1	exon	ENSMUSG00000020536	ProperStrand	20	chrX	34622946	34623036	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-5.2611
chr11	60001911	60001927	protein_coding	Rai1	exon	ENSMUSG00000062115	NonProperStrand	81	chr9	15119631	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-3.8135
chr15	36527746	36538348	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr19	8800361	8800457	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	20	-inf
mmu-miR-15b-5p	1	22	miRNA	mmu-miR-15b-5p	.	mmu-miR-15b-5p	ProperStrand	8	chr8	91555644	91555754	protein_coding	Sall1	exon	ENSMUSG00000031665	ProperStrand	96	1	-16.4090
chr11	100454258	100457481	protein_coding	Dnajc7	exon	ENSMUSG00000014195	ProperStrand	49	chr11	97643000	97643090	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	8	-inf
chr2	164251618	164251705	protein_coding	Sdc4	exon	ENSMUSG00000017009	ProperStrand	177	chr9	120039554	120039644	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.5130
chr3	135268101	135268119	protein_coding	Nfkb1	exon	ENSMUSG00000028163	ProperStrand	55	chr4	131908688	131908807	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.3443
chr4	86502099	86502189	protein_coding	Rps6	exon	ENSMUSG00000028495	ProperStrand	263	chr15	73375442	73375522	protein_coding	Dennd3	exon	ENSMUSG00000036661	ProperStrand	11	1	-13.8154
chr16	34357475	34360910	protein_coding	Kalrn	exon	ENSMUSG00000061751	NonProperStrand	52	chr8	73419657	73419730	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.3903
chr4	126699017	126709220	protein_coding	Sfpq	exon	ENSMUSG00000028820	ProperStrand	340	chr1	162965999	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-1.7277
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr3	113827103	113827119	protein_coding	Col11a1	utr3	ENSMUSG00000027966	NonProperStrand	139	1	-6.1308
chr8	114522243	114522469	protein_coding	Kars	exon	ENSMUSG00000031948	ProperStrand	89	chr10	75322828	75322918	protein_coding	Mif	utr5	ENSMUSG00000033307	ProperStrand	146	1	-10.7360
chr9	61765349	61765418	protein_coding	Kif23	utr3	ENSMUSG00000032254	ProperStrand	41	chr9	15119727	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.3086
chr7	19736679	19736699	protein_coding	Snrpd2	exon	ENSMUSG00000040824	ProperStrand	23	chr7	116663640	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.2677
chr10	30320342	30320358	protein_coding	Trmt11	intron	ENSMUSG00000019792	NonProperStrand	26	chr7	52382014	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-8.3878
chr5	99444014	99444033	protein_coding	Prkg2	intron	ENSMUSG00000029334	NonProperStrand	57	chr7	151768076	151768093	protein_coding	Fadd	exon	ENSMUSG00000031077	NonProperStrand	4	1	-19.0170
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr18	75161108	75161172	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	1	-3.6372
chr3	135584999	135585015	LTR	RMER17B	ERVK	chr3RMER17B135584430	NonProperStrand	1	chr18	35716762	35716831	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-inf
chr3	153575150	153575168	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	chr18	10345617	10345636	protein_coding	Greb1l	intron	ENSMUSG00000042942	NonProperStrand	11	1	-11.9558
chr5	141186317	141186407	protein_coding-noncoding	Baat1	utr5	ENSMUSG00000000148	ProperStrand	1	chr5	141186128	141186208	protein_coding	Baat1	exon	ENSMUSG00000000148	ProperStrand	14	1	-inf
chr15	96063288	96063304	lincRNA	4833422M21Rik	exon	ENSMUSG00000085460	NonProperStrand	37	chr7	52713936	52713963	protein_coding	Ftl1	exon	ENSMUSG00000050708	ProperStrand	807	1	-9.0878
chr11	102264579	102264679	protein_coding	Slc25a39	utr3	ENSMUSG00000018677	ProperStrand	35	chr17	35088957	35089010	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-6.9364
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr10	23505147	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	17	-0.8362
chr16	16231160	16231186	protein_coding	Pkp2	intron	ENSMUSG00000041957	ProperStrand	19	chr4	128900887	128900926	protein_coding	C77080	exon	ENSMUSG00000050390	ProperStrand	48	2	-22.3689
chr16	87421175	87421211	protein_coding	Ltn1	exon	ENSMUSG00000052299	ProperStrand	49	chr18	35716731	35716760	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-4.4334
chrX	35894260	35894310	protein_coding	Cul4b	intron	ENSMUSG00000031095	ProperStrand	31	chr1	162965568	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-7.5364
chr6	113284585	113284601	protein_coding	Camk1	exon	ENSMUSG00000030272	ProperStrand	13	chr2	29632365	29632411	protein_coding	Trub2	utr3	ENSMUSG00000039826	ProperStrand	2	1	-inf
chrX	7305847	7305888	protein_coding	Praf2	exon	ENSMUSG00000031149	ProperStrand	9	chr16	23111719	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.4225
chr5	141112000	141112100	protein_coding	Ttyh3	intron	ENSMUSG00000036565	ProperStrand	22	chr2	91436280	91436336	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-9.5194
chr19	29698232	29698255	protein_coding	Ermp1	exon	ENSMUSG00000046324	ProperStrand	103	chr18	33954879	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-4.4689
chr2	90235296	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr3	30218789	30218808	protein_coding	Mecom	intron	ENSMUSG00000027684	ProperStrand	12	1	-7.6663
chr7	52713409	52714913	protein_coding	Ftl1	utr3	ENSMUSG00000050708	ProperStrand	807	chr8	73419657	73419786	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	5	-1.2400
chr7	142278302	142278392	protein_coding	Dock1	intron	ENSMUSG00000058325	ProperStrand	22	chr7	117189866	117189946	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-5.2455
chr6	120798480	120798522	protein_coding	Bcl2l13	utr5	ENSMUSG00000009112	ProperStrand	18	chr7	29136602	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.5789
chr17	5332778	5332796	protein_coding	Arid1b	intron	ENSMUSG00000069729	ProperStrand	28	chr11	6428109	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.6242
chr8	61274920	61274938	protein_coding	Galntl6	intron	ENSMUSG00000061864	NonProperStrand	25	chr7	109343502	109344363	protein_coding	Nup98	utr5	ENSMUSG00000063550	ProperStrand	100	6	-inf
chr6	51415179	51415239	protein_coding	Hnrnpa2b1	exon	ENSMUSG00000004980	ProperStrand	166	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-3.9122
chr15	96846602	96846622	protein_coding	Slc38a4	exon	ENSMUSG00000022464	ProperStrand	139	chr9	78328185	78328416	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-4.6977
chr7	17112542	17112591	protein_coding	Grlf1	intron	ENSMUSG00000058230	ProperStrand	38	chr11	69481387	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-6.8133
chr1	163787495	163787558	protein_coding	AI848100	exon	ENSMUSG00000040297	ProperStrand	12	chr3	123210855	123210876	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.0354
chr2	35056472	35056521	protein_coding	Rab14	utr5	ENSMUSG00000026878	ProperStrand	21	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-9.0955
chr5	74489202	74489317	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr19	8963032	8963048	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-2.6781
chr8	73996001	73996131	protein_coding	Dda1	exon	ENSMUSG00000074247	ProperStrand	11	chr7	117190029	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-10.8572
chrX	19683228	19683244	protein_coding	Slc9a7	exon	ENSMUSG00000037341	NonProperStrand	136	chr17	35299527	35299562	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-3.2446
chr11	6428076	6428169	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr17	62806333	62806366	snoRNA	ENSMUSG00000064570_SNORA9	.	ENSMUSG00000064570	ProperStrand	7	5	-inf
chr4	43505655	43505723	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr2	130103751	130103804	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	4	-1.0708
chr12	17552962	17553089	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr2	130101989	130102089	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	7	-1.1793
chr10	75359822	75360194	protein_coding	Smarcb1	exon	ENSMUSG00000000902	ProperStrand	109	chr7	29786848	29786958	protein_coding	Map4k1	exon	ENSMUSG00000037337	ProperStrand	31	1	-13.4476
chr2	172182474	172182615	protein_coding	Aurka	exon	ENSMUSG00000027496	ProperStrand	31	chr12	60774058	60774110	snoRNA	ENSMUSG00000077603_SNORA3	.	ENSMUSG00000077603	ProperStrand	185	2	-18.7019
chrX	96245892	96245908	protein_coding	Stard8	intron	ENSMUSG00000031216	ProperStrand	142	chr1	162968443	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-4.4093
chr18	38409775	38409791	lincRNA	1700086O06Rik	exon	ENSMUSG00000086988	NonProperStrand	28	chr8	26158722	26158741	protein_coding	Plekha2	intron	ENSMUSG00000031557	ProperStrand	12	1	-18.0050
chr9	22465568	22465585	protein_coding	Bbs9	intron	ENSMUSG00000035919	ProperStrand	51	chr11	77994684	77994701	protein_coding	Rpl23a	exon	ENSMUSG00000058546	ProperStrand	121	1	-12.2329
chr15	102149948	102150048	protein_coding	Espl1	exon	ENSMUSG00000058290	ProperStrand	172	chr11	69483136	69483205	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-0.8927
chr11	14961829	14961849	LINE	Lx	L1	chr11Lx14961726	ProperStrand	93	chr18	75161533	75161596	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-6.3349
chr13	55335325	55335351	protein_coding	Nsd1	exon	ENSMUSG00000021488	ProperStrand	186	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-5.9385
chr3	144350686	144350786	protein_coding	Sh3glb1	intron	ENSMUSG00000037062	ProperStrand	9	chr16	23110940	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.9939
chr9	21574234	21574374	protein_coding	Kank2	exon	ENSMUSG00000032194	ProperStrand	196	chr12	109460710	109460726	protein_coding	Ccdc85c	intron	ENSMUSG00000084883	ProperStrand	157	1	-9.0111
chr7	56211816	56211835	Low_complexity	GA-rich	Low_complexity	chr7GA-rich56211776	ProperStrand	1	chr14	22804073	22804090	protein_coding	Zfp503	utr3	ENSMUSG00000039081	NonProperStrand	7	1	-inf
chr4	43505651	43505733	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr7	30041615	30041643	protein_coding	Spint2	utr3	ENSMUSG00000074227	ProperStrand	82	1	-2.5221
chr4	155277617	155277942	protein_coding	Acap3	exon	ENSMUSG00000029033	ProperStrand	3	chr4	149026816	149026832	protein_coding	Pik3cd	exon	ENSMUSG00000039936	ProperStrand	151	1	-17.9116
chr9	64248812	64248897	protein_coding	Megf11	intron	ENSMUSG00000036466	ProperStrand	15	chr8	129468746	129468836	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-7.1564
chr6	128386603	128386661	protein_coding	Fkbp4	exon	ENSMUSG00000030357	ProperStrand	114	chr16	4676959	4677012	protein_coding	Coro7	exon	ENSMUSG00000039637	ProperStrand	25	3	-20.6365
chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	chr11	120670391	120670519	protein_coding	Fasn	exon	ENSMUSG00000025153	ProperStrand	298	5	-19.5977
chr16	8634623	8634723	protein_coding	Tmem186	utr3	ENSMUSG00000043140	ProperStrand	3	chr9	15118332	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-9.6743
chr4	145740123	145740162	protein_coding	Gm13251	intron	ENSMUSG00000070605	ProperStrand	6	chr7	51505507	51505591	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	1	-13.5381
chr1	190814886	190814923	protein_coding	Kctd3	intron	ENSMUSG00000026608	ProperStrand	28	chr15	34370545	34370617	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-5.0008
chr14	64647284	64647300	protein_coding	Rp1l1	exon	ENSMUSG00000046049	ProperStrand	1	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-inf
chr10	70697617	70697707	protein_coding	Tfam	exon	ENSMUSG00000003923	ProperStrand	13	chr9	15119305	15119385	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-8.1710
chr11	62418013	62418035	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr18	35069548	35069771	protein_coding	Etf1	exon	ENSMUSG00000024360	ProperStrand	74	2	-13.5954
chr5	121602242	121602332	protein_coding	Ptpn11	exon	ENSMUSG00000043733	ProperStrand	25	chr4	131908362	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.8464
chr10	127995731	127995811	protein_coding	Pa2g4	utr3	ENSMUSG00000025364	ProperStrand	72	chr15	34370545	34370635	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-3.2160
chr2	48927391	48927407	protein_coding	Mbd5	intron	ENSMUSG00000036792	NonProperStrand	25	chr13	101541067	101541088	protein_coding	Cenph	intron	ENSMUSG00000045273	NonProperStrand	45	1	-15.6518
chr12	110881049	110881072	lincRNA	Rian	intron	ENSMUSG00000091793	ProperStrand	612	chr8	13174952	13175033	protein_coding	Lamp1	utr3	ENSMUSG00000031447	ProperStrand	92	1	-7.8123
chr19	25484358	25484374	protein_coding	Kank1	exon	ENSMUSG00000032702	ProperStrand	218	chrX	140770320	140770378	protein_coding	Alg13	intron	ENSMUSG00000041718	ProperStrand	45	1	-11.3061
chr4	142699213	142701551	protein_coding	Prdm2	utr3	ENSMUSG00000057637	ProperStrand	46	chr3	88497851	88497931	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	4	-19.7884
chr19	3457021	3459420	protein_coding	Ppp6r3	exon	ENSMUSG00000024908	ProperStrand	63	chr16	23110839	23110919	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	8	-6.8562
chrX	11634841	11634858	protein_coding	Bcor	exon	ENSMUSG00000040363	NonProperStrand	293	chr1	99641980	99641997	protein_coding	Ppip5k2	exon	ENSMUSG00000040648	ProperStrand	35	1	-11.2228
chr7	134562992	134563052	protein_coding	Zfp688	exon	ENSMUSG00000045251	ProperStrand	3	chr16	23110914	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr7	106630797	106630859	protein_coding	Rps3	exon	ENSMUSG00000030744	ProperStrand	159	chr2	26768391	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	2	-6.3120
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr1	63225577	63225711	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	2	-1.9954
chr2	173051005	173051021	protein_coding	Pmepa1	utr3	ENSMUSG00000038400	NonProperStrand	13	chr19	8963027	8963081	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.1201
chr8	72540279	72540369	protein_coding	Mau2	utr3	ENSMUSG00000031858	ProperStrand	17	chr15	79913300	79913317	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-6.0370
chr11	102468341	102468360	protein_coding	Fzd2	utr3	ENSMUSG00000050288	ProperStrand	15	chr16	23110848	23110875	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.0842
chr2	113674063	113674134	protein_coding	Arhgap11a	exon	ENSMUSG00000041219	ProperStrand	47	chr5	111121066	111121126	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	4	-inf
chr11	75123733	75123750	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr2	130101992	130102085	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-2.6575
chr8	13416896	13416912	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr10	119319599	119319615	protein_coding	Grip1	intron	ENSMUSG00000034813	ProperStrand	38	1	-7.3636
chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	chr18	32070967	32070983	protein_coding	Sft2d3	utr5	ENSMUSG00000044982	ProperStrand	10	1	-14.2825
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr12	88778629	88778722	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	4	-8.5928
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr17	24856619	24856701	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	2	-2.0684
chr13	30178227	30178307	LINE	Lx8	L1	chr13Lx830178168	NonProperStrand	1	chr13	30178586	30178676	LTR	MTB_Mm	MaLR	chr13MTB_Mm30178374	NonProperStrand	1	1	-inf
chr6	55450450	55450510	protein_coding	Adcyap1r1	utr3	ENSMUSG00000029778	ProperStrand	3	chr16	23110893	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr14	70094423	70094454	protein_coding	Loxl2	utr3	ENSMUSG00000034205	ProperStrand	28	chrX	152009278	152009294	protein_coding	Ptchd1	exon	ENSMUSG00000041552	NonProperStrand	294	1	-11.6688
chr15	76720846	76720862	protein_coding	Zfp7	exon	ENSMUSG00000033669	ProperStrand	15	chr14	33005065	33005138	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-6.7159
chr4	137793141	137795460	protein_coding	Hp1bp3	exon	ENSMUSG00000028759	ProperStrand	21	chr11	69483200	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.3745
chr2	58999093	58999129	protein_coding	Pkp4	utr5	ENSMUSG00000026991	ProperStrand	33	chr11	97642952	97643018	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.5405
chr1	154976210	154976227	protein_coding	Lamc2	exon	ENSMUSG00000026479	NonProperStrand	4	chr16	23110886	23110907	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.6489
chr18	60934339	60938088	protein_coding	Rps14	utr5	ENSMUSG00000024608	ProperStrand	154	chr17	35089181	35089226	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	2	-6.2332
chr4	119450493	119450511	protein_coding	Hivep3	intron	ENSMUSG00000028634	NonProperStrand	13	chr1	162965531	162965587	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-6.2408
chr5	112799017	112799107	protein_coding	Hps4	exon	ENSMUSG00000042328	ProperStrand	27	chr19	9047532	9047594	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	1	-11.0779
chr9	7407602	7407622	LTR	RLTR6_Mm	ERV1	chr9RLTR6_Mm7407144	NonProperStrand	4	chr19	8963043	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-7.6308
chr6	113419923	113419940	protein_coding	Il17re	exon	ENSMUSG00000043088	NonProperStrand	12	chr4	131866155	131866283	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-6.8239
chr6	107974516	107974596	LTR	ORR1D2	MaLR	chr6ORR1D2107974473	NonProperStrand	1	chr11	76055447	76055537	protein_coding	Glod4	intron	ENSMUSG00000017286	NonProperStrand	2	1	-inf
chr14	57292740	57292798	protein_coding	Mphosph8	exon	ENSMUSG00000079184	ProperStrand	29	chr4	131865856	131865946	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.9946
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr11	49447754	49447770	protein_coding	Flt4	exon	ENSMUSG00000020357	ProperStrand	37	1	-9.6886
chr8	46648732	46648748	protein_coding	Sorbs2	intron	ENSMUSG00000031626	ProperStrand	50	chr6	72388907	72388923	protein_coding	Mat2a	intron	ENSMUSG00000053907	ProperStrand	51	1	-14.0102
chr2	17967463	17967479	protein_coding	2810030E01Rik	exon	ENSMUSG00000054074	ProperStrand	15	chr4	122970406	122970526	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-10.2219
chr10	77732757	77732780	protein_coding	Agpat3	utr3	ENSMUSG00000001211	ProperStrand	22	chr1	89673567	89673657	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	3	-12.2683
chr1	72272872	72272962	snRNA	ENSMUSG00000075752_U2	.	ENSMUSG00000075752	ProperStrand	535	chr17	24665420	24665492	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	4	-5.1551
chr10	76540473	76540573	protein_coding	Col18a1	exon	ENSMUSG00000001435	ProperStrand	287	chr17	24857638	24857917	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	1	-6.5382
chr11	97642981	97643087	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	chr7	67123689	67123779	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	4	-1.5367
chr14	70708480	70708550	protein_coding	Slc39a14	exon	ENSMUSG00000022094	ProperStrand	17	chr7	29136575	29136599	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-11.3511
chr1	181027187	181027205	protein_coding	Smyd3	intron	ENSMUSG00000055067	ProperStrand	231	chr1	162965980	162965999	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-1.3547
chr15	72933561	72933651	protein_coding	Eif2c2	utr3	ENSMUSG00000036698	ProperStrand	154	chr13	49820634	49821539	protein_coding	Iars	exon	ENSMUSG00000037851	ProperStrand	95	1	-10.4983
chr13	63612936	63612952	protein_coding	Ptch1	exon	ENSMUSG00000021466	NonProperStrand	118	chr7	134740950	134741007	protein_coding	Rnf40	exon	ENSMUSG00000030816	ProperStrand	12	1	-15.2553
chr4	53157776	53157797	protein_coding	Abca1	intron	ENSMUSG00000015243	NonProperStrand	10	chr7	150717298	150717348	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-9.1270
chr15	36538397	36538494	protein_coding	Pabpc1	utr5	ENSMUSG00000022283	ProperStrand	908	chr2	135820134	135824417	protein_coding	Plcb4	exon	ENSMUSG00000039943	NonProperStrand	57	1	-7.9853
chr4	98404265	98404343	protein_coding	L1td1	exon	ENSMUSG00000087166	ProperStrand	43	chr7	118219574	118219606	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-7.9666
chr12	106002505	106002521	protein_coding	Clmn	utr3	ENSMUSG00000021097	NonProperStrand	30	chr11	6428123	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.4908
chr1	90162955	90162978	protein_coding	Hjurp	exon	ENSMUSG00000044783	ProperStrand	110	chrX	84483709	84483756	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-7.0419
chr5	110647481	110647516	protein_coding	Golga3	intron	ENSMUSG00000029502	ProperStrand	17	chr19	8800355	8800418	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-5.9706
chr15	77597977	77597993	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr8	87595694	87595724	protein_coding	Dhps	utr5	ENSMUSG00000060038	ProperStrand	1	1	-inf
chr11	87862966	87863037	protein_coding	Srsf1	exon	ENSMUSG00000018379	ProperStrand	49	chr7	16534823	16534839	protein_coding	Ehd2	utr3	ENSMUSG00000074364	NonProperStrand	197	1	-11.3370
chr12	74645816	74645832	protein_coding	Tmem30b	utr3	ENSMUSG00000034435	NonProperStrand	2	chr14	122419519	122419647	protein_coding	Ubac2	utr3	ENSMUSG00000041765	ProperStrand	25	1	-20.8701
mmu-miR-1949	5	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr11	77995191	77995251	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-1.5196
chr1	172612010	172612026	protein_coding	Olfml2b	exon	ENSMUSG00000038463	ProperStrand	57	chr17	23955970	23956021	protein_coding	Srrm2	utr3	ENSMUSG00000039218	ProperStrand	521	1	-9.0898
chr2	136910405	136910422	protein_coding	Jag1	exon	ENSMUSG00000027276	ProperStrand	15	chrX	34622991	34623037	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-5.8363
chr18	12172461	12172477	protein_coding	6030446N20Rik	intron	ENSMUSG00000049411	ProperStrand	235	chr11	69481336	69481385	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-1.0360
chr17	79609302	79609320	LTR	ORR1E	MaLR	chr17ORR1E79609259	ProperStrand	1	chr11	69481334	69481432	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-inf
chr7	112629988	112630004	protein_coding	Prkcdbp	intron	ENSMUSG00000037060	NonProperStrand	43	chr17	35089182	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-6.1404
chr11	4985996	4986052	protein_coding	Ewsr1	exon	ENSMUSG00000009079	ProperStrand	248	chr13	63615578	63615616	protein_coding	Ptch1	exon	ENSMUSG00000021466	ProperStrand	50	2	-16.8773
chr4	126559848	126566767	protein_coding	Zmym4	exon	ENSMUSG00000042446	ProperStrand	94	chr1	162967489	162967510	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-2.6710
chr11	106853182	106853233	protein_coding	Kpna2	exon	ENSMUSG00000018362	ProperStrand	70	chr4	131865868	131865928	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-6.3096
chr4	57455800	57455817	protein_coding	Palm2	intron	ENSMUSG00000090053	ProperStrand	17	chr2	26493456	26493482	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-6.1967
chr13	68759738	68764669	protein_coding	Adcy2	exon	ENSMUSG00000021536	ProperStrand	237	chr2	130101241	130101259	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-3.9356
chr2	70895643	70895659	protein_coding	Dcaf17	intron	ENSMUSG00000041966	NonProperStrand	89	chr1	88252836	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-5.8629
chr1	95263746	95263763	protein_coding	Ppp1r7	utr3	ENSMUSG00000026275	ProperStrand	44	chr8	32260373	32260422	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-5.2305
chr8	3452130	3452147	protein_coding	Arhgef18	exon	ENSMUSG00000004568	NonProperStrand	11	chr4	131908809	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.1344
chr9	78275533	78275550	pseudogene	Gm8093	.	ENSMUSG00000087052	ProperStrand	1	chr5	130295414	130295450	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-inf
chr9	40610564	40610664	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr15	39673474	39673491	protein_coding	Dpys	exon	ENSMUSG00000022304	ProperStrand	27	4	-19.6035
chr11	69482248	69482593	protein_coding	Eif4a1	exon	ENSMUSG00000059796	ProperStrand	108	chr16	23111691	23111781	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-3.3420
chr1	181709784	181709827	protein_coding	Ahctf1	exon	ENSMUSG00000026491	ProperStrand	39	chr10	23505151	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.8710
chr7	112533562	112533579	protein_coding	Fam160a2	exon	ENSMUSG00000044465	ProperStrand	85	chr18	35716777	35716877	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-3.0071
chr13	98279437	98279517	LTR	RLTR16	ERVK	chr13RLTR1698279449	NonProperStrand	2	chr19	8963065	8963155	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-9.4105
chr2	32779704	32779772	protein_coding	Fam129b	utr3	ENSMUSG00000026796	ProperStrand	22	chr11	101304958	101306599	protein_coding	Rpl27	exon	ENSMUSG00000063316	ProperStrand	96	1	-14.4027
chr13	83609669	83609749	LINE	L1Md_F2	L1	chr13L1Md_F283609692	ProperStrand	1	chr13	83609384	83609474	LINE	Lx4A	L1	chr13Lx4A83609376	NonProperStrand	1	1	-inf
chr2	90744624	90744799	protein_coding	Ndufs3	exon	ENSMUSG00000005510	ProperStrand	6	chr10	110918603	110918693	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-8.0545
chr7	140312236	140312271	protein_coding	Ctbp2	intron	ENSMUSG00000030970	ProperStrand	89	chr3	144748059	144749264	protein_coding	Clca5	exon	ENSMUSG00000036960	ProperStrand	86	1	-11.7980
chr4	102649987	102656538	antisense	Gm12709	.	ENSMUSG00000085181	ProperStrand	10	chr19	8798484	8798537	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-8.8233
chr11	115667935	115668040	protein_coding	Caskin2	exon	ENSMUSG00000034471	ProperStrand	17	chr14	76247776	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-6.6490
chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	2	-4.2329
chr14	56406769	56406786	protein_coding	Ripk3	exon	ENSMUSG00000022221	NonProperStrand	12	chr1	88252837	88252877	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-9.9014
chr4	46513708	46513808	protein_coding	Nans	exon	ENSMUSG00000028334	ProperStrand	18	chr5	130300528	130300554	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.7422
chr15	100416584	100416600	protein_coding	Pou6f1	intron	ENSMUSG00000009739	ProperStrand	44	chr2	180702509	180705781	protein_coding	Arfgap1	utr5	ENSMUSG00000027575	ProperStrand	18	1	-16.3716
chr3	85448965	85456213	protein_coding	Pet112l	exon	ENSMUSG00000028085	ProperStrand	81	chr11	6428088	6428154	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.6601
chr5	35226756	35228080	protein_coding	Htt	exon	ENSMUSG00000029104	ProperStrand	73	chr12	106269428	106269508	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-3.7722
chr7	63486507	63486555	protein_coding	Herc2	utr3	ENSMUSG00000030451	ProperStrand	66	chr18	63109676	63109692	protein_coding	Apcdd1	exon	ENSMUSG00000071847	NonProperStrand	254	1	-10.2287
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr6	30908232	30908249	protein_coding	Klf14	exon	ENSMUSG00000073209	NonProperStrand	12	1	-11.0126
chr5	92485111	92485201	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	chr1	59761635	59761713	snoRNA	ENSMUSG00000089093_Snord11	.	ENSMUSG00000089093	ProperStrand	193	1	-6.4177
chr15	12791496	12794812	protein_coding	Drosha	exon	ENSMUSG00000022191	ProperStrand	163	chr16	38158093	38158160	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	1	-6.6624
chr1	134530347	134530408	protein_coding	Nfasc	intron	ENSMUSG00000026442	ProperStrand	25	chr4	131908723	131908797	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-6.9248
chr17	46676266	46676283	protein_coding	Cul9	exon	ENSMUSG00000040327	ProperStrand	8	chr9	120038467	120038607	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-6.9869
chr9	65047610	65047710	SINE	RSINE1	B4	chr9RSINE165047551	NonProperStrand	1	chr18	35716812	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-inf
chr13	51654819	51654836	protein_coding	Shc3	intron	ENSMUSG00000021448	ProperStrand	50	chr5	115939531	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-8.2302
chr17	45705267	45707297	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr2	158182156	158182291	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	3	-0.8697
chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr14	96988060	96988180	snoRNA	ENSMUSG00000064581_SNORA30	.	ENSMUSG00000064581	ProperStrand	146	2	-7.8088
chr11	5180669	5180685	protein_coding	Znrf3	utr3	ENSMUSG00000041961	NonProperStrand	210	chr18	75979993	75980012	protein_coding	Zbtb7c	utr5	ENSMUSG00000044646	ProperStrand	64	1	-10.6710
chr7	4091083	4094139	protein_coding	Leng8	exon	ENSMUSG00000035545	ProperStrand	49	chr16	23111389	23111481	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-6.3940
chr14	14712965	14712982	protein_coding	Gm281	intron	ENSMUSG00000084902	NonProperStrand	3	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.6896
chr3	29998163	29998183	protein_coding	Mecom	intron	ENSMUSG00000027684	ProperStrand	12	chr9	120038466	120038527	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-6.1449
chr7	51790054	51790070	protein_coding	Pold1	exon	ENSMUSG00000038644	ProperStrand	50	chr2	130101984	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	4	-17.2411
chr10	51981595	51981685	protein_coding	Dcbld1	exon	ENSMUSG00000019891	ProperStrand	21	chr16	23110911	23110991	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.5481
chr6	87950101	87995189	protein_coding	Rab7	exon	ENSMUSG00000079477	ProperStrand	33	chr16	23110891	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	7	-10.0187
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr10	10502400	10502417	protein_coding	Grm1	exon	ENSMUSG00000019828	NonProperStrand	17	1	-10.3473
chr13	75845790	75845807	protein_coding	Ell2	intron	ENSMUSG00000001542	ProperStrand	110	chr14	52829519	52829569	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-6.9954
chr2	63936035	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr15	79908951	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	5	-5.5599
chr5	74489202	74489282	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr15	81506744	81507266	protein_coding	L3mbtl2	exon	ENSMUSG00000022394	ProperStrand	19	1	-7.9189
chr6	129217869	129217886	protein_coding	Cd69	utr3	ENSMUSG00000030156	ProperStrand	2	chr16	23110901	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr10	110419171	110423008	protein_coding	Zdhhc17	exon	ENSMUSG00000035798	ProperStrand	11	chr10	110918637	110918687	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-6.7706
chr4	131908357	131908464	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr12	99497602	99497618	protein_coding	Galc	utr5	ENSMUSG00000021003	NonProperStrand	65	1	-7.1001
chr11	99885311	99885327	protein_coding	Krt33b	exon	ENSMUSG00000057723	NonProperStrand	352	chr4	116826699	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	3	-8.4258
chr14	34907593	34907918	protein_coding	Anxa8	exon	ENSMUSG00000021950	ProperStrand	26	chr18	35716763	35716787	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.6526
chr10	86296891	86296924	protein_coding	Nt5dc3	utr3	ENSMUSG00000054027	ProperStrand	16	chr1	162967515	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-6.0334
chr8	11209638	11210763	protein_coding	Col4a1	exon	ENSMUSG00000031502	NonProperStrand	10	chr3	153574604	153574654	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	1	-13.3379
chr12	30684759	30684775	protein_coding	Pxdn	exon	ENSMUSG00000020674	NonProperStrand	16	chr3	108357359	108357418	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	2	-11.5767
chr8	108233712	108233729	protein_coding	4933405L10Rik	exon	ENSMUSG00000013158	ProperStrand	94	chr9	120038565	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-4.0300
chr8	48262875	48262965	LTR	RLTR17	ERVK	chr8RLTR1748262873	ProperStrand	1	chr8	48262584	48262674	SINE	B3A	B2	chr8B3A48262580	NonProperStrand	1	1	-inf
chr1	88255794	88255884	protein_coding	Ncl	utr5	ENSMUSG00000026234	ProperStrand	1184	chr5	115939533	115939612	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-2.2277
chr8	73419335	73419395	protein_coding	Rpl18a	exon	ENSMUSG00000045128	ProperStrand	394	chr5	65780350	65780379	protein_coding	Rpl9	exon	ENSMUSG00000047215	ProperStrand	113	2	-13.1813
chr7	150717305	150717395	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	chr1	87983867	87983947	snoRNA	ENSMUSG00000077274_SNORA26	.	ENSMUSG00000077274	ProperStrand	361	1	-2.2081
chr14	48794235	48794273	protein_coding	Peli2	intron	ENSMUSG00000021846	ProperStrand	9	chr15	34370546	34370627	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-7.2969
chr11	69483212	69483312	protein_coding-noncoding	Eif4a1	utr3	ENSMUSG00000059796	ProperStrand	68	chr4	122970470	122970527	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-7.1656
chr13	68759738	68764669	protein_coding	Adcy2	exon	ENSMUSG00000021536	ProperStrand	237	chr5	30662638	30662688	protein_coding	Ccdc164	intron	ENSMUSG00000073102	ProperStrand	1	1	-inf
chrX	98610524	98610540	protein_coding	Zmym3	exon	ENSMUSG00000031310	NonProperStrand	2	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr2	30746527	30746627	protein_coding	Ptges	utr3	ENSMUSG00000050737	ProperStrand	5	chr17	13112511	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-9.6638
chr1	182682495	182682550	protein_coding	Acbd3	utr3	ENSMUSG00000026499	ProperStrand	67	chr3	123210854	123210870	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.8893
chr6	13553038	13553090	protein_coding	Tmem168	exon	ENSMUSG00000029569	ProperStrand	17	chr1	155287314	155287354	snoRNA	ENSMUSG00000064435_SNORA4	.	ENSMUSG00000064435	ProperStrand	263	1	-12.9129
chr1	33828651	33828669	protein_coding	Zfp451	intron	ENSMUSG00000042197	NonProperStrand	393	chr15	100475405	100475471	protein_coding	Bin2	exon	ENSMUSG00000075411	ProperStrand	12	3	-inf
chr2	150781352	150784298	protein_coding	Ninl	exon	ENSMUSG00000068115	ProperStrand	51	chr16	23110961	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-4.0315
chr4	149119018	149119035	protein_coding	Slc25a33	exon	ENSMUSG00000028982	ProperStrand	7	chr5	121655098	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-8.0440
chr17	68677667	68677683	protein_coding	L3mbtl4	intron	ENSMUSG00000041565	NonProperStrand	4	chr2	11670698	11670746	protein_coding	Fbxo18	exon	ENSMUSG00000058594	ProperStrand	6	1	-19.4007
chr3	121157945	121160023	protein_coding	Cnn3	exon	ENSMUSG00000053931	ProperStrand	77	chr16	23111374	23111454	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.9354
chr4	42999129	43001538	protein_coding	Vcp	exon	ENSMUSG00000028452	ProperStrand	108	chr8	32260335	32260433	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-3.5244
chr5	121658442	121658462	protein_coding	Rpl6	exon	ENSMUSG00000029614	ProperStrand	332	chr4	131826033	131826123	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	4	-17.3411
chrX	12182307	12182323	protein_coding	Atp6ap2	exon	ENSMUSG00000031007	NonProperStrand	4	chr11	55296276	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-11.8259
chr13	74464496	74464785	protein_coding	Sdha	exon	ENSMUSG00000021577	ProperStrand	70	chr11	87430874	87430894	protein_coding	Hsf5	exon	ENSMUSG00000070345	NonProperStrand	3	1	-21.3208
chr5	135016841	135016858	protein_coding	Clip2	intron	ENSMUSG00000063146	ProperStrand	35	chr4	115747521	115747575	protein_coding	Uqcrh	utr5	ENSMUSG00000063882	ProperStrand	6	1	-18.4708
chr19	9047548	9051808	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-1.7624
chr11	77996558	77996585	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	chr5	147646733	147646817	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	1	-1.3167
chr3	75820499	75820519	LTR	RMER16	ERVK	chr3RMER1675820469	NonProperStrand	1	chr18	35716696	35716803	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-inf
chr19	8799829	8799897	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	chr8	32260335	32260423	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	12	-1.5682
chr17	24607858	24607896	protein_coding	Pgp	exon	ENSMUSG00000043445	ProperStrand	35	chr10	74106511	74106527	protein_coding	Pcdh15	exon	ENSMUSG00000052613	ProperStrand	33	1	-15.6014
chr9	110124535	110124612	protein_coding	Smarcc1	exon	ENSMUSG00000032481	ProperStrand	108	chr15	76126379	76126397	protein_coding	Gm10345	exon	ENSMUSG00000071724	ProperStrand	9	1	-16.0316
chr16	21214481	21214529	protein_coding	Ephb3	exon	ENSMUSG00000005958	ProperStrand	23	chr10	79958478	79958495	protein_coding	Onecut3	exon	ENSMUSG00000045518	ProperStrand	8	1	-18.6862
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr14	122147441	122147458	protein_coding	Dock9	intron	ENSMUSG00000025558	ProperStrand	38	1	-9.6347
chr13	44964971	44965034	protein_coding	Jarid2	intron	ENSMUSG00000038518	ProperStrand	372	chr1	89673706	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	NonProperStrand	27	1	-11.2723
chr1	36127880	36127997	protein_coding	Hs6st1	intron	ENSMUSG00000045216	ProperStrand	63	chr16	23111468	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.1926
chr19	8798507	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	chr19	8799582	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	3	-1.1053
chr1	135517330	135517370	protein_coding	Zc3h11a	utr3	ENSMUSG00000026464	ProperStrand	102	chr2	179992377	179992715	protein_coding	Rps21	exon	ENSMUSG00000039001	ProperStrand	46	1	-12.7850
chr11	102294587	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr18	35714143	35714264	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	6	-4.2010
chr9	118931703	118931753	protein_coding	Ctdspl	intron	ENSMUSG00000047409	ProperStrand	8	chr17	36000485	36000501	protein_coding	Nrm	exon	ENSMUSG00000059791	ProperStrand	253	1	-14.5613
chr5	31505626	31505961	protein_coding	Ppm1g	exon	ENSMUSG00000029147	ProperStrand	69	chr11	97642952	97642992	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.2363
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr14	64829132	64829149	protein_coding	Msra	intron	ENSMUSG00000054733	NonProperStrand	84	1	-9.7526
chr2	167836656	167836680	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	chr18	35716835	35716885	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-2.4398
chr9	20713116	20713165	protein_coding	Dnmt1	exon	ENSMUSG00000004099	ProperStrand	91	chr16	23110472	23110526	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.7820
chr11	42440243	42440259	protein_coding	Gabrb2	exon	ENSMUSG00000007653	ProperStrand	248	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-3.1766
chr2	53011489	53011545	protein_coding	Prpf40a	exon	ENSMUSG00000061136	ProperStrand	129	chr9	120039565	120039655	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.9988
mmu-miR-92a-3p	5	21	miRNA	mmu-miR-92a-3p	.	mmu-miR-92a-3p	ProperStrand	7	chr2	26494763	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-12.0192
chr6	113647429	113647529	protein_coding	Tatdn2	utr5	ENSMUSG00000056952	ProperStrand	24	chr2	32818915	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	3	-16.5234
chr17	28033454	28033490	protein_coding	Uhrf1bp1	utr3	ENSMUSG00000039512	ProperStrand	79	chr4	131908687	131908884	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-4.2533
chr19	18656643	18656723	protein_coding	Ostf1	intron	ENSMUSG00000024725	ProperStrand	8	chr2	26768259	26768535	protein_coding	Rpl7a	exon	ENSMUSG00000062647	NonProperStrand	2	1	-26.0014
chr4	47416341	47418431	protein_coding	Tgfbr1	exon	ENSMUSG00000007613	ProperStrand	22	chr11	97642952	97643011	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	4	-14.0505
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	NonProperStrand	8	chr11	6428078	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	NonProperStrand	91	2	-18.8830
chr2	166859149	166859241	protein_coding	Ddx27	exon	ENSMUSG00000017999	ProperStrand	55	chr4	131865855	131865876	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.9045
chr14	55087249	55087339	protein_coding	Lrp10	exon	ENSMUSG00000022175	ProperStrand	19	chr7	29136527	29136607	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-7.5039
chr7	4745162	4745211	protein_coding	Rpl28	exon	ENSMUSG00000030432	ProperStrand	220	chr1	162965530	162965548	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.1760
chr5	87985052	87985070	protein_coding	Sult1d1	exon	ENSMUSG00000029273	ProperStrand	1	chr11	74969761	74969781	protein_coding	Smg6	exon	ENSMUSG00000038290	ProperStrand	29	1	-inf
chr12	79910910	79910927	protein_coding	Mpp5	exon	ENSMUSG00000021112	NonProperStrand	26	chr8	23600342	23600364	protein_coding	Slc20a2	intron	ENSMUSG00000037656	ProperStrand	63	1	-14.9066
chr12	104014027	104014127	protein_coding	Ubr7	utr3	ENSMUSG00000041712	ProperStrand	46	chr1	39605591	39605624	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	17	-inf
chr6	142775519	142775537	protein_coding	St8sia1	utr3	ENSMUSG00000030283	ProperStrand	42	chr4	138639264	138639364	protein_coding	Nbl1	exon	ENSMUSG00000041120	ProperStrand	2	1	-inf
chr7	91400291	91400308	protein_coding	Arnt2	intron	ENSMUSG00000015709	ProperStrand	11	chr17	35299507	35299595	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-8.1746
chrX	45308856	45308956	protein_coding	Ocrl	intron	ENSMUSG00000001173	ProperStrand	9	chr17	24665453	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	2	-14.0875
chr17	24857633	24858149	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr11	77995188	77995234	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	2	-4.7669
chr1	75484537	75484553	protein_coding	Obsl1	exon	ENSMUSG00000026211	NonProperStrand	192	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-4.0545
chr8	13416897	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr19	8799581	8799645	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-0.7901
chr11	62192148	62196691	protein_coding	Ncor1	exon	ENSMUSG00000018501	ProperStrand	132	chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-4.3187
chr14	52837423	52837448	protein_coding	Chd8	exon	ENSMUSG00000053754	ProperStrand	167	chr4	56910496	56910618	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	3	-9.9757
chr19	45071862	45071878	protein_coding	Sema4g	exon	ENSMUSG00000025207	ProperStrand	58	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-11.7537
chr19	57548329	57548390	protein_coding	Trub1	intron	ENSMUSG00000025086	ProperStrand	19	chr8	48972477	48972495	protein_coding	Wwc2	exon	ENSMUSG00000031563	NonProperStrand	56	3	-20.1946
chr19	21871900	21871916	protein_coding	Tmem2	exon	ENSMUSG00000024754	NonProperStrand	3	chr5	130300419	130300531	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-8.5956
chr18	42483809	42485644	protein_coding	Rbm27	exon	ENSMUSG00000024491	ProperStrand	38	chr17	13112566	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-5.4665
chr2	129998642	129998715	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr4	131908236	131908346	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	17	-2.3899
chr4	88056728	88056818	protein_coding	BC057079	utr3	ENSMUSG00000038368	ProperStrand	52	chr7	116663634	116663714	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	4	-9.7661
chr3	136526736	136526753	protein_coding	Ppp3ca	intron	ENSMUSG00000028161	NonProperStrand	120	chr9	15118322	15118375	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-2.2492
chr11	51507755	51507804	protein_coding	Sec24a	utr3	ENSMUSG00000036391	ProperStrand	42	chr16	23111454	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-5.0758
chr8	71612775	71612803	protein_coding	Atp6v1b2	exon	ENSMUSG00000006273	ProperStrand	29	chr8	8667320	8681387	protein_coding	Arglu1	exon	ENSMUSG00000040459	ProperStrand	20	1	-16.9402
chr14	15572351	15572371	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr11	69483136	69483277	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	5	-5.9932
chr13	103895241	103895257	protein_coding	Mast4	intron	ENSMUSG00000034751	ProperStrand	150	chr10	23506834	23506975	protein_coding	Rps12	utr5	ENSMUSG00000061983	ProperStrand	309	1	-8.1956
chr4	99577397	99577413	protein_coding	Itgb3bp	intron	ENSMUSG00000028549	ProperStrand	55	chr8	129468746	129468847	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	2	-7.6123
chr13	3575250	3575307	protein_coding	BC016423	exon	ENSMUSG00000033799	ProperStrand	15	chr16	23110913	23110956	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-8.3022
chr2	89368462	89368478	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	chr11	116938615	116938705	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-3.3463
chr8	96697091	96697303	protein_coding	Mt2	exon	ENSMUSG00000031762	ProperStrand	71	chr5	74489544	74489634	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-3.4665
chr17	35985579	35985800	protein_coding	Mdc1	exon	ENSMUSG00000061607	ProperStrand	85	chr4	131908236	131908282	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.9537
chr3	96132421	96132515	snRNA	ENSMUSG00000075978_U1	.	ENSMUSG00000075978	ProperStrand	132	chr4	131865867	131865988	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.4888
chr3	58263272	58263951	protein_coding	Tsc22d2	exon	ENSMUSG00000027806	ProperStrand	7	chr19	47432620	47432637	protein_coding	Sh3pxd2a	intron	ENSMUSG00000053617	ProperStrand	57	1	-17.7452
chr11	57874941	57874957	protein_coding	Larp1	utr3	ENSMUSG00000037331	ProperStrand	201	chr9	120037898	120038031	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-2.4928
chr17	3632368	3632390	SINE	B4A	B4	chr17B4A3632325	NonProperStrand	4	chr16	23111436	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-16.1405
chr9	99483993	99484009	protein_coding	Dbr1	exon	ENSMUSG00000032469	ProperStrand	162	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-8.7734
chr2	51959156	51959206	protein_coding	Rif1	exon	ENSMUSG00000036202	ProperStrand	201	chr9	15120932	15121012	snoRNA	ENSMUSG00000065265_SNORA32	.	ENSMUSG00000065265	ProperStrand	101	2	-15.5205
chr10	87459711	87459801	LINE	L1Md_F2	L1	chr10L1Md_F287455361	ProperStrand	1	chr17	4082620	4082710	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	1	-inf
chr13	113805758	113805838	LTR	ORR1A0	MaLR	chr13ORR1A0113805686	ProperStrand	1	chr18	6202269	6202359	protein_coding	Kif5b	utr3	ENSMUSG00000006740	ProperStrand	65	1	-inf
chr18	37967004	37967090	protein_coding	Pcdhga9	exon	ENSMUSG00000023036	ProperStrand	245	chr1	162967518	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	4	-5.1707
chr2	41199972	41199989	protein_coding	Lrp1b	exon	ENSMUSG00000049252	ProperStrand	376	chr17	35089180	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	2	-3.8008
chr1	158737570	158737669	protein_coding	Ralgps2	utr3	ENSMUSG00000026594	NonProperStrand	5	chr16	23110958	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	NonProperStrand	93	1	-17.4832
chr5	138403913	138403930	protein_coding	Gjc3	intron	ENSMUSG00000056966	NonProperStrand	11	chrX	71517921	71517951	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-9.9870
chr2	90235315	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr15	9038120	9038136	protein_coding	1110020G09Rik	utr3	ENSMUSG00000022253	NonProperStrand	20	1	-6.6233
chr16	91818789	91818806	protein_coding	Atp5o	intron	ENSMUSG00000022956	ProperStrand	37	chr4	131908810	131908892	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-7.5796
chr15	89019522	89019580	protein_coding	Fam116b	intron	ENSMUSG00000015377	ProperStrand	3	chr5	147646795	147646848	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	1	-14.3311
chr13	23830796	23830838	protein_coding	Hist1h1c	exon	ENSMUSG00000036181	ProperStrand	99	chr9	120038467	120038537	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	3	-5.8893
chr11	102151141	102151231	protein_coding	Atxn7l3	utr3	ENSMUSG00000059995	ProperStrand	24	chr17	24857717	24857797	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.9467
chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	chr11	20138495	20138548	protein_coding	Cep68	exon	ENSMUSG00000044066	ProperStrand	15	1	-11.3190
chr6	87793949	87793983	protein_coding	Cnbp	utr3	ENSMUSG00000030057	ProperStrand	46	chr14	51709218	51709266	tRNA	tRNA191-TyrGTA	.	721971	ProperStrand	21	1	-15.9837
chr17	34253199	34253275	protein_coding	Brd2	utr5	ENSMUSG00000024335	ProperStrand	69	chr12	17553034	17553079	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-4.8190
chr4	151704153	151704189	protein_coding	Rpl22	exon	ENSMUSG00000028936	ProperStrand	112	chr5	118299802	118299825	protein_coding	Nos1	intron	ENSMUSG00000029361	ProperStrand	11	1	-15.5125
chr10	36718313	36720206	protein_coding	Hdac2	exon	ENSMUSG00000019777	ProperStrand	36	chr3	123210854	123210894	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-7.5922
chr9	30235085	30235102	protein_coding	Snx19	exon	ENSMUSG00000031993	ProperStrand	353	chr4	131908301	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	5	-0.7400
chr2	32563527	32563544	protein_coding	Cdk9	exon	ENSMUSG00000009555	NonProperStrand	49	chr15	99070172	99070188	protein_coding	Kcnh3	exon	ENSMUSG00000037579	NonProperStrand	44	1	-14.3581
chr4	140147882	140149077	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	ProperStrand	15	chr12	55797794	55797874	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	1	-10.5069
chr2	80421038	80421122	protein_coding	Nckap1	exon	ENSMUSG00000027002	ProperStrand	21	chr3	123210854	123210889	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.9390
chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	chrX	148329599	148331191	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	3	-14.2930
chr15	79554737	79554827	protein_coding	Sun2	utr3	ENSMUSG00000042524	ProperStrand	13	chr7	150717335	150717415	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-8.5801
chr8	73979265	73979282	LTR	RLTR20B3	ERVK	chr8RLTR20B373979244	ProperStrand	4	chr8	113335319	113335383	protein_coding	Sf3b3	exon	ENSMUSG00000033732	ProperStrand	181	1	-16.8548
chr5	130295431	130295531	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	NonProperStrand	4	chr7	116664806	116664866	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	NonProperStrand	12	2	-21.4075
chr1	10015134	10017224	protein_coding	Cops5	exon	ENSMUSG00000025917	ProperStrand	11	chr19	47970971	47970987	protein_coding	Itprip	utr3	ENSMUSG00000079254	ProperStrand	75	1	-16.3203
chr9	54754640	54754673	protein_coding	Ireb2	exon	ENSMUSG00000032293	ProperStrand	45	chr13	23831041	23831132	protein_coding	Hist1h1c	exon	ENSMUSG00000036181	ProperStrand	99	1	-12.8886
chr11	94201375	94201459	protein_coding	Ankrd40	utr3	ENSMUSG00000020864	ProperStrand	11	chr2	84795680	84795770	protein_coding	Slc43a3	exon	ENSMUSG00000027074	ProperStrand	4	1	-20.1343
chr11	40516059	40516139	protein_coding	Hmmr	utr3	ENSMUSG00000020330	ProperStrand	61	chr14	68295365	68295455	protein_coding	Cdca2	exon	ENSMUSG00000048922	ProperStrand	50	1	-13.6465
chrX	49626089	49668071	protein_coding	Gpc3	exon	ENSMUSG00000055653	ProperStrand	43	chr8	13876176	13876226	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-7.8091
chr5	135597632	135597649	protein_coding	Mlxipl	exon	ENSMUSG00000005373	ProperStrand	12	chr2	160191558	160191574	protein_coding	Mafb	exon	ENSMUSG00000074622	ProperStrand	31	1	-17.5565
chr9	110501707	110501738	protein_coding	Setd2	exon	ENSMUSG00000044791	ProperStrand	51	chr1	162965531	162965588	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.5744
chr11	33061202	33061574	protein_coding	Npm1	exon	ENSMUSG00000057113	ProperStrand	352	chr11	48614367	48614434	snoRNA	ENSMUSG00000064500_SNORD95	.	ENSMUSG00000064500	ProperStrand	100	1	-8.7451
chr2	130101241	130101310	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	chr13	49779667	49779802	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	2	-2.0080
chr9	63868722	63868738	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	chr8	23280289	23280389	protein_coding	Ckap2	exon	ENSMUSG00000037725	ProperStrand	69	2	-13.2303
chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	chr4	112929378	112929396	protein_coding	Skint6	intron	ENSMUSG00000087194	NonProperStrand	35	1	-11.7071
chr5	124573036	124573213	protein_coding	Pitpnm2	exon	ENSMUSG00000029406	ProperStrand	12	chr3	122445955	122446035	protein_coding	Pde5a	intron	ENSMUSG00000053965	ProperStrand	6	2	-20.2457
chr4	118033133	118033166	protein_coding	Hyi	intron	ENSMUSG00000006395	NonProperStrand	5	chr4	131908234	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-10.1894
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr2	84886581	84886804	protein_coding	Ssrp1	exon	ENSMUSG00000027067	ProperStrand	118	1	-7.3666
chr7	109214309	109219810	protein_coding	Trpc2	utr5	ENSMUSG00000070425	ProperStrand	15	chr1	89673687	89673777	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-5.9364
chr7	129277665	129278569	protein_coding-noncoding	Dctn5	utr5	ENSMUSG00000030868	ProperStrand	2	chr16	23111391	23111471	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-inf
chr11	77505669	77505763	protein_coding	Nufip2	exon	ENSMUSG00000037857	ProperStrand	36	chr2	91436266	91436289	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	2	-13.5747
chr4	11536619	11536670	protein_coding-noncoding	Rad54b	utr5	ENSMUSG00000078773	ProperStrand	1	chr7	29605201	29605571	protein_coding	Hnrnpl	exon	ENSMUSG00000015165	ProperStrand	150	1	-inf
chr11	60280817	60280863	protein_coding	Drg2	intron	ENSMUSG00000020537	NonProperStrand	7	chr16	23110920	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.4785
chr6	144963999	144964099	protein_coding	Bcat1	exon	ENSMUSG00000030268	ProperStrand	49	chr3	84995363	84995380	protein_coding	Arfip1	intron	ENSMUSG00000074513	NonProperStrand	56	1	-13.8643
chr4	148870492	148870509	protein_coding	Lzic	utr3	ENSMUSG00000028990	ProperStrand	9	chr7	117189957	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	3	-16.4121
chr11	12450761	12450841	LINE	L1Md_F2	L1	chr11L1Md_F212449803	ProperStrand	1	chr11	12437812	12437902	LTR	RMER15	ERVL	chr11RMER1512437706	ProperStrand	1	1	-inf
chr2	33308963	33309063	protein_coding	Zbtb43	utr3	ENSMUSG00000026788	ProperStrand	4	chr1	162968447	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-11.7228
chr2	90235296	90235347	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	86596478	86605477	protein_coding	Polg	exon	ENSMUSG00000039176	ProperStrand	93	2	-6.1643
chr4	32830740	32830771	protein_coding	Mdn1	exon	ENSMUSG00000058006	ProperStrand	184	chr4	122970449	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	3	-12.1811
chr2	43110993	43111010	LINE	Lx6	L1	chr2Lx643110257	ProperStrand	35	chr9	64022855	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-9.1083
chr14	76247724	76247773	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	chr8	34802358	34802416	snoRNA	ENSMUSG00000088856_SNORA48	.	ENSMUSG00000088856	ProperStrand	236	1	-1.7741
chr2	121126235	121126283	protein_coding	Mtap1a	exon	ENSMUSG00000027254	ProperStrand	17	chr6	83111671	83111687	protein_coding	1700003E16Rik	exon	ENSMUSG00000030030	ProperStrand	352	1	-12.3301
chr14	32523948	32524019	protein_coding	Ankrd28	exon	ENSMUSG00000014496	ProperStrand	39	chr5	54389949	54389965	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	1	-11.6506
chr11	30864499	30864589	protein_coding	Asb3	intron	ENSMUSG00000020305	ProperStrand	4	chr12	17552966	17553046	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-10.7041
chr7	125312484	125315278	protein_coding	Smg1	exon	ENSMUSG00000030655	ProperStrand	70	chr1	162965986	162966010	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	6	-17.5332
chr6	120338059	120338076	protein_coding	Kdm5a	exon	ENSMUSG00000030180	ProperStrand	57	chr12	106269283	106269383	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-4.2375
chr11	119142372	119142426	protein_coding	Gaa	intron	ENSMUSG00000025579	ProperStrand	149	chr17	24857717	24857807	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-0.9559
chr1	172612010	172612026	protein_coding	Olfml2b	exon	ENSMUSG00000038463	ProperStrand	57	chr16	23110829	23110939	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-0.8756
chr9	70290123	70290197	protein_coding	Rnf111	exon	ENSMUSG00000032217	ProperStrand	33	chr9	63868722	63868739	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	6	-18.9889
chr1	60541582	60541661	protein_coding	Raph1	intron	ENSMUSG00000026014	ProperStrand	19	chr4	131908236	131908354	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-11.6032
chr4	151680209	151680299	protein_coding	Icmt	utr3	ENSMUSG00000039662	ProperStrand	48	chr2	26494760	26494840	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	5	-14.9786
chr10	60692417	60692433	protein_coding	Adamts14	exon	ENSMUSG00000059901	NonProperStrand	127	chr7	117189902	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-3.6690
chr10	59413293	59413332	protein_coding	Ddit4	exon	ENSMUSG00000020108	ProperStrand	49	chr9	64024956	64024998	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	1	-9.5489
chr7	112890682	112890772	protein_coding	Taf10	utr3	ENSMUSG00000043866	ProperStrand	14	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-11.8868
chr7	29605186	29605211	protein_coding	Hnrnpl	exon	ENSMUSG00000015165	ProperStrand	150	chrX	11635848	11635865	protein_coding	Bcor	exon	ENSMUSG00000040363	NonProperStrand	293	1	-8.3013
chr11	33057012	33059987	protein_coding	Npm1	exon	ENSMUSG00000057113	ProperStrand	352	chr7	117166748	117166828	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-1.6813
chr16	20684559	20685612	protein_coding	Eif4g1	exon	ENSMUSG00000045983	ProperStrand	199	chr4	116826717	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-4.4465
chr12	73317934	73318408	protein_coding	Rtn1	exon	ENSMUSG00000021087	NonProperStrand	10	chr7	116664840	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-5.9693
chr6	146708677	146708693	protein_coding	Stk38l	exon	ENSMUSG00000001630	ProperStrand	60	chr15	99433433	99433451	protein_coding	Aqp6	exon	ENSMUSG00000043144	NonProperStrand	45	1	-13.8950
chr15	36527282	36527749	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr19	17469255	17469272	protein_coding	Rfk	intron	ENSMUSG00000024712	ProperStrand	4	1	-13.5543
chr5	108334226	108334329	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	chr10	127895516	127895566	tRNA	tRNA688-SerCGA	.	846545	ProperStrand	71	3	-10.7592
chr7	13609962	13609978	protein_coding	Trim28	utr5	ENSMUSG00000005566	NonProperStrand	6	chr4	116826697	116826764	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	2	-18.0472
chr9	45669971	45670003	protein_coding	Bace1	utr3	ENSMUSG00000032086	NonProperStrand	11	chr3	123210881	123210971	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.2109
chr7	17102620	17102710	protein_coding	Grlf1	intron	ENSMUSG00000058230	ProperStrand	38	chr7	16540433	16540523	protein_coding	Ehd2	intron	ENSMUSG00000074364	ProperStrand	2	1	-inf
chr4	116862546	116862636	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	chr10	39978346	39978426	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-1.4877
chr6	97112808	97112877	snoRNA	ENSMUSG00000065728_SNORA36	.	ENSMUSG00000065728	ProperStrand	158	chr2	26494773	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.5072
chr1	78814531	78814547	protein_coding	Kcne4	exon	ENSMUSG00000047330	NonProperStrand	1	chr16	23110959	23110999	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr13	58229815	58229895	protein_coding	Hnrnpa0	utr5	ENSMUSG00000007836	ProperStrand	110	chr7	3158302	3158392	protein_coding	AU018091	utr3	ENSMUSG00000054753	ProperStrand	42	1	-12.8166
chr18	78017323	78017575	protein_coding	Atp5a1	exon	ENSMUSG00000025428	ProperStrand	254	chr15	34370545	34370662	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-2.2839
chr11	116938557	116938750	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	chr12	106269284	106269384	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	51	-21.5751
chr11	106148439	106148455	protein_coding	Tcam1	utr3	ENSMUSG00000020712	NonProperStrand	5	chr11	88153422	88153494	protein_coding	Msi2	utr3	ENSMUSG00000069769	ProperStrand	159	1	-16.4774
chr8	73032388	73033195	protein_coding	2810422J05Rik	exon	ENSMUSG00000055553	ProperStrand	171	chr17	35087894	35087919	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-3.2275
chr9	15123930	15123963	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	NonProperStrand	100	chr14	33005138	33005184	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	2	-5.2656
chr6	65065889	65065906	protein_coding	Smarcad1	utr3	ENSMUSG00000029920	NonProperStrand	5	chr11	69481342	69481432	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-13.4175
chr4	149993274	149993306	protein_coding	Rere	exon	ENSMUSG00000039852	ProperStrand	76	chr19	8963064	8963165	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-5.2736
chr14	47808947	47808963	protein_coding	Gch1	utr5	ENSMUSG00000037580	NonProperStrand	31	chr9	120037932	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-5.9972
chr19	45835681	45835771	protein_coding	Mgea5	intron	ENSMUSG00000025220	ProperStrand	53	chr11	68886945	68887025	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-4.3796
chr2	18778386	18778404	protein_coding	Pip4k2a	intron	ENSMUSG00000026737	ProperStrand	6	chr9	15119967	15120016	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-12.0008
chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	chr7	17425822	17425859	protein_coding	Strn4	utr3	ENSMUSG00000030374	ProperStrand	12	1	-13.1564
chr12	71146207	71146258	protein_coding	Nin	exon	ENSMUSG00000021068	ProperStrand	95	chr9	40612866	40612895	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	1	-8.6232
chr15	75878571	75879409	protein_coding	Scrib	exon	ENSMUSG00000022568	ProperStrand	154	chr18	35716763	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-2.7669
chr14	57204539	57204555	protein_coding	Parp4	exon	ENSMUSG00000054509	NonProperStrand	113	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-2.9423
chr5	121657189	121658442	protein_coding	Rpl6	exon	ENSMUSG00000029614	ProperStrand	332	chr19	8799869	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-1.8767
chr15	81508375	81508392	protein_coding	L3mbtl2	intron	ENSMUSG00000022394	ProperStrand	19	chr8	3604907	3604972	protein_coding	Camsap3	exon	ENSMUSG00000044433	ProperStrand	86	1	-14.9299
chr4	77957002	77957020	LINE	Lx6	L1	chr4Lx677956774	ProperStrand	16	chr7	52714596	52714952	protein_coding	Ftl1	exon	ENSMUSG00000050708	ProperStrand	807	1	-10.7958
chr4	52492687	52492787	protein_coding	Smc2	intron	ENSMUSG00000028312	ProperStrand	50	chr9	120038613	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	4	-11.3915
chr2	168498998	168499049	protein_coding	Atp9a	exon	ENSMUSG00000027546	ProperStrand	16	chr19	8800087	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-10.2835
chrX	151764924	151764940	protein_coding	Prdx4	exon	ENSMUSG00000025289	ProperStrand	29	chr4	131908356	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.5844
chr6	125079862	125079952	protein_coding	Chd4	exon	ENSMUSG00000063870	ProperStrand	303	chr14	76247753	76247833	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-1.4032
chr7	51505822	51505909	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	chr11	69483136	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	7	-1.9285
chr8	108091332	108091349	protein_coding	Agrp	exon	ENSMUSG00000005705	ProperStrand	4	chr4	131865929	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.0048
chr7	29603843	29603862	protein_coding	Hnrnpl	exon	ENSMUSG00000015165	ProperStrand	150	chr11	68886974	68887038	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	4	-8.9366
chr1	135319552	135319587	protein_coding	Sox13	intron	ENSMUSG00000070643	ProperStrand	6	chr4	131865932	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-6.1051
chr7	127799657	127799674	protein_coding	Uqcrc2	exon	ENSMUSG00000030884	NonProperStrand	3	chr12	17552941	17553053	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	NonProperStrand	16	1	-inf
chr2	156124347	156130435	protein_coding	Phf20	exon	ENSMUSG00000038116	ProperStrand	60	chr16	23110828	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-1.4598
chr2	164650831	164650925	protein_coding	Zswim1	exon	ENSMUSG00000017764	ProperStrand	68	chr11	68887019	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-3.9083
chr4	43505675	43505694	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr9	119065160	119065207	protein_coding	Acaa1b	intron	ENSMUSG00000010651	ProperStrand	2	1	-10.3311
chr16	44101893	44101950	protein_coding	Atp6v1a	exon	ENSMUSG00000052459	ProperStrand	79	chr8	73419657	73419729	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.6439
chr10	60803728	60803996	protein_coding	X99384	exon	ENSMUSG00000020092	ProperStrand	60	chr18	39065329	39065346	protein_coding	Fgf1	intron	ENSMUSG00000036585	ProperStrand	14	1	-16.2941
chr13	28845941	28845962	lincRNA	2610307P16Rik	intron	ENSMUSG00000085936	ProperStrand	154	chr5	148113281	148113297	protein_coding	Cdx2	utr3	ENSMUSG00000029646	ProperStrand	276	1	-8.3677
chr9	61761201	61761263	protein_coding	Rplp1	exon	ENSMUSG00000007892	ProperStrand	116	chr2	24205199	24205215	protein_coding	Il1rn	utr3	ENSMUSG00000026981	ProperStrand	45	1	-12.5698
chr13	59737260	59737350	protein_coding	Golm1	utr3	ENSMUSG00000021556	ProperStrand	27	chr11	97642967	97643047	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.9172
chr3	88504354	88504385	protein_coding	2810403A07Rik	exon	ENSMUSG00000028060	ProperStrand	22	chr9	120038573	120038663	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	5	-inf
chr12	25742067	25742129	protein_coding	Kidins220	exon	ENSMUSG00000036333	ProperStrand	26	chr7	117166812	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	3	-14.8379
chr11	93829716	93829733	protein_coding	Nme1	utr5	ENSMUSG00000037601	ProperStrand	12	chr7	116664793	116664870	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-5.5966
chr7	17144217	17144302	protein_coding	Grlf1	intron	ENSMUSG00000058230	ProperStrand	38	chr16	23110970	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.7634
chr10	74524885	74524975	protein_coding	Bcr	exon	ENSMUSG00000009681	ProperStrand	19	chr4	131866155	131866235	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-5.8910
chr2	31844609	31890423	protein_coding	Nup214	exon	ENSMUSG00000001855	ProperStrand	62	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-6.0084
chr4	139374114	139374131	protein_coding	Pax7	intron	ENSMUSG00000028736	ProperStrand	23	chr8	32260386	32260428	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-6.5150
chr4	131908232	131908257	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr15	76736331	76736552	protein_coding	Rpl8	exon	ENSMUSG00000003970	ProperStrand	191	1	-4.9873
chr5	31583743	31583766	protein_coding	Ift172	exon	ENSMUSG00000038564	ProperStrand	28	chr11	55296208	55296275	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-7.7004
chr8	28059678	28059768	LINE	Lx7	L1	chr8Lx728059662	NonProperStrand	1	chr8	28059505	28059595	SINE	B1_Mur3	Alu	chr8B1_Mur328059521	NonProperStrand	1	1	-inf
chr11	68802604	68802656	protein_coding	Pfas	intron	ENSMUSG00000020899	NonProperStrand	9	chr4	131865858	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-17.1106
chr3	136526736	136526753	protein_coding	Ppp3ca	intron	ENSMUSG00000028161	NonProperStrand	120	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.3635
chr14	51427251	51427351	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr7	26169781	26169848	protein_coding	Lipe	intron	ENSMUSG00000003123	NonProperStrand	63	2	-11.4350
chr5	104255169	104257408	protein_coding	Aff1	exon	ENSMUSG00000029313	ProperStrand	82	chr4	131908374	131908428	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.9981
chr12	103939755	103939855	protein_coding	Itpk1	intron	ENSMUSG00000057963	ProperStrand	47	chr2	26493364	26493393	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	17	-inf
chr11	69481706	69481745	protein_coding	Eif4a1	exon	ENSMUSG00000059796	ProperStrand	108	chr11	6428035	6428123	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.1738
chr17	45705040	45705187	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr2	63936035	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-1.7192
chr5	122110870	122110886	protein_coding	Brap	utr5	ENSMUSG00000029458	ProperStrand	36	chr8	41597396	41597413	protein_coding	Vps37a	utr5	ENSMUSG00000031600	ProperStrand	9	1	-18.2601
chrX	91435145	91435187	protein_coding	Eif2s3x	utr3	ENSMUSG00000035150	NonProperStrand	83	chr9	120039533	120039618	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	4	-9.6568
chr2	109842669	109843615	protein_coding	Lgr4	exon	ENSMUSG00000050199	ProperStrand	27	chr11	120209166	120209331	protein_coding	Actg1	exon	ENSMUSG00000062825	ProperStrand	178	1	-12.7459
chr8	113339937	113340132	protein_coding	Sf3b3	exon	ENSMUSG00000033732	ProperStrand	181	chr19	8799590	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-4.6126
chr12	114825035	114825125	LINE	Lx5	L1	chr12Lx5114824863	ProperStrand	1	chr12	114825257	114825347	LINE	Lx5	L1	chr12Lx5114825102	ProperStrand	1	1	-inf
chr5	22129827	22129846	lincRNA	6030443J06Rik	intron	ENSMUSG00000087558	NonProperStrand	2	chr11	97642999	97643089	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-9.6446
chr2	181117779	181117824	protein_coding	Lime1	exon	ENSMUSG00000090077	ProperStrand	7	chr16	23111394	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-12.6567
chr17	56257328	56257344	LTR	RLTR25B	ERVK	chr17RLTR25B56257276	NonProperStrand	75	chr16	33234579	33234595	protein_coding	Osbpl11	exon	ENSMUSG00000022807	ProperStrand	31	1	-14.1960
chr4	17940371	17940389	protein_coding	Mmp16	intron	ENSMUSG00000028226	NonProperStrand	4	chr16	23111447	23111499	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-6.3168
chr17	24856618	24856718	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	chr4	116828379	116828456	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-1.8872
chr13	96283200	96283285	protein_coding	F2rl1	exon	ENSMUSG00000021678	ProperStrand	28	chr10	23505152	23505208	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-4.3109
chr11	106648277	106648304	protein_coding	Ddx5	exon	ENSMUSG00000020719	ProperStrand	181	chr3	36866262	36868157	protein_coding	4932438A13Rik	exon	ENSMUSG00000037270	ProperStrand	96	1	-10.1541
chr17	23955819	23955838	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	chr17	23685732	23685756	tRNA	tRNA995-ArgCCT	.	1167882	ProperStrand	18	1	-13.9188
chr1	113003706	113003786	LINE	Lx2B	L1	chr1Lx2B113003184	ProperStrand	1	chr2	91015294	91015384	protein_coding	Madd	intron	ENSMUSG00000040687	NonProperStrand	1	1	-inf
chr4	5361421	5361442	LTR	MER31A	ERV1	chr4MER31A5361413	NonProperStrand	2	chr1	88248633	88248662	snoRNA	ENSMUSG00000064696_SNORD20	.	ENSMUSG00000064696	ProperStrand	89	2	-inf
chrX	6989467	6989550	lincRNA	2010204K13Rik	exon	ENSMUSG00000063018	ProperStrand	1	chr4	131908689	131908741	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-inf
chr17	23806449	23806465	protein_coding-noncoding	Thoc6	utr3	ENSMUSG00000041319	NonProperStrand	6	chr10	62342117	62342169	protein_coding	Tet1	exon	ENSMUSG00000047146	ProperStrand	286	1	-14.9489
chr5	122691914	122691930	protein_coding	Hvcn1	utr3	ENSMUSG00000064267	ProperStrand	182	chr1	63225253	63225312	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	1	-6.6287
chr9	21548752	21548768	protein_coding	Ldlr	exon	ENSMUSG00000032193	NonProperStrand	39	chr9	120038030	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-5.5437
chr9	20744993	20745914	protein_coding	Dnmt1	exon	ENSMUSG00000004099	ProperStrand	91	chr1	162967547	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-2.7274
chr17	45710142	45710197	protein_coding	Hsp90ab1	utr5	ENSMUSG00000023944	ProperStrand	1627	chr2	44420456	44420473	protein_coding	Gtdc1	utr3	ENSMUSG00000036890	NonProperStrand	13	1	-9.8259
chr10	62814230	62814250	protein_coding	Sirt1	intron	ENSMUSG00000020063	ProperStrand	7	chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-10.8545
chr8	73115886	73115986	protein_coding	Ell	utr3	ENSMUSG00000070002	ProperStrand	32	chr1	162967530	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.6627
chr17	85637230	85637246	protein_coding	1700106N22Rik	intron	ENSMUSG00000071037	ProperStrand	17	chr11	62416976	62417003	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-8.5754
chr7	54443766	54443866	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	chr7	29136619	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	5	-2.3959
chr11	4263888	4263943	protein_coding	Hormad2	intron	ENSMUSG00000020419	ProperStrand	8	chr11	115935746	115937022	protein_coding	Unc13d	exon	ENSMUSG00000057948	ProperStrand	89	1	-16.6254
chr7	133940247	133940387	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	chr5	121828827	121828843	protein_coding	Trafd1	exon	ENSMUSG00000042726	ProperStrand	81	1	-7.7411
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr1	181027187	181027205	protein_coding	Smyd3	intron	ENSMUSG00000055067	ProperStrand	231	1	-6.2492
mmu-miR-714	1	21	miRNA	mmu-miR-714	.	mmu-miR-714	ProperStrand	4	chr10	23505152	23505252	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-6.2798
chr4	114741487	114741504	protein_coding	Tal1	utr3	ENSMUSG00000028717	NonProperStrand	69	chr4	131908254	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	6	-9.1439
chr8	107893104	107893121	protein_coding	Slc9a5	utr3	ENSMUSG00000014786	NonProperStrand	25	chr16	23110828	23110895	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-5.7718
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr3	123210854	123210971	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	7	-5.2876
chr18	20904663	20904753	protein_coding	B4galt6	utr5	ENSMUSG00000056124	ProperStrand	31	chr7	117166773	117166853	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-6.1098
chr11	115448757	115448795	protein_coding	Gga3	exon	ENSMUSG00000020740	ProperStrand	44	chr11	97642952	97643070	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.0151
chr6	125050960	125072558	protein_coding	Chd4	exon	ENSMUSG00000063870	ProperStrand	303	chr16	23110828	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	15	-1.6873
chr6	120889742	120889760	protein_coding	Mical3	intron	ENSMUSG00000051586	NonProperStrand	4	chr10	79756721	79756793	protein_coding	Rps15	exon	ENSMUSG00000063457	ProperStrand	119	1	-17.5158
chr15	98604924	98606960	protein_coding	Wnt10b	exon	ENSMUSG00000022996	NonProperStrand	189	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-6.3146
chr1	157805847	157806862	protein_coding	Cep350	exon	ENSMUSG00000033671	NonProperStrand	6	chr4	131865855	131865967	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-6.1051
chr1	94844196	94844269	protein_coding	Capn10	utr3	ENSMUSG00000026270	ProperStrand	32	chr9	120039540	120039630	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-4.4995
chr4	43505700	43505780	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr3	31017660	31017750	protein_coding	Skil	utr3	ENSMUSG00000027660	ProperStrand	23	1	-4.8772
chr11	63885336	63887052	protein_coding	Cox10	exon	ENSMUSG00000042148	NonProperStrand	187	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	2	-7.2914
chr2	26493363	26493490	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr11	62416951	62417024	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	9	-0.8499
chr2	180419856	180422195	protein_coding	Dido1	exon	ENSMUSG00000038914	ProperStrand	81	chr1	162966814	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	3	-13.1355
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr15	10379380	10379429	protein_coding	Dnajc21	exon	ENSMUSG00000044224	ProperStrand	17	1	-9.4690
chr15	58804086	58886643	protein_coding	Mtss1	exon	ENSMUSG00000022353	ProperStrand	68	chr2	32818804	32818882	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	6	-19.4417
chr19	34568622	34568674	protein_coding	Lipa	exon	ENSMUSG00000024781	ProperStrand	2	chr4	41260476	41260497	protein_coding	Dcaf12	exon	ENSMUSG00000028436	ProperStrand	33	1	-19.7718
chr7	116665205	116665229	protein_coding	Rpl27a	exon	ENSMUSG00000046364	ProperStrand	149	chr11	68886928	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-2.4984
chr15	76008149	76008243	protein_coding	Plec	exon	ENSMUSG00000022565	ProperStrand	186	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-4.7133
chr10	80507382	80507658	protein_coding	Sgta	utr3	ENSMUSG00000004937	ProperStrand	17	chr4	131908689	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-11.5351
chr17	57164995	57165085	protein_coding	Khsrp	exon	ENSMUSG00000007670	ProperStrand	353	chr5	74489595	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-0.9241
chr4	107596083	107596100	protein_coding	Cpt2	utr5	ENSMUSG00000028607	NonProperStrand	106	chr6	136509569	136509659	protein_coding	Atf7ip	exon	ENSMUSG00000030213	ProperStrand	22	1	-14.2040
chr9	61772473	61772518	protein_coding	Kif23	exon	ENSMUSG00000032254	ProperStrand	41	chr14	70479883	70479901	protein_coding	Egr3	utr3	ENSMUSG00000033730	ProperStrand	1	1	-inf
chr3	7552770	7552818	protein_coding	Fam164a	utr3	ENSMUSG00000043542	ProperStrand	9	chr4	131908687	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.5343
chr18	7910807	7916114	protein_coding	Wac	exon	ENSMUSG00000024283	ProperStrand	38	chr17	35299507	35299597	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-5.6675
chr16	50202641	50220600	protein_coding	Bbx	exon	ENSMUSG00000022641	ProperStrand	18	chr16	23110913	23110993	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-3.3354
chr10	68801341	68803325	protein_coding	Cdk1	exon	ENSMUSG00000019942	ProperStrand	42	chr8	13416897	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-7.1634
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	2	-4.5159
chr13	118098517	118098535	DNA	URR1A	MER1_type	chr13URR1A118098393	NonProperStrand	1	chr16	11144124	11144202	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	1	-inf
chr19	44377789	44379180	protein_coding	Scd2	utr3	ENSMUSG00000025203	ProperStrand	219	chr11	77996560	77996616	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	2	-6.1142
chr2	32818840	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	chr11	74718981	74719008	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	1	-1.6313
chr2	121878218	121878308	protein_coding	Eif3j	utr3	ENSMUSG00000027236	ProperStrand	15	chr7	148634704	148634784	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-6.7080
chr5	74489273	74489330	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr15	36526798	36527258	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	1	-0.9522
chr5	125997258	125997323	protein_coding	Aacs	utr3	ENSMUSG00000029482	ProperStrand	12	chr15	98350193	98350283	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-7.9765
chr8	72613823	72613839	protein_coding	Hapln4	utr3	ENSMUSG00000007594	NonProperStrand	85	chr18	73693169	73693190	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-4.8480
chr7	105122549	105122904	protein_coding	Gdpd4	exon	ENSMUSG00000035582	ProperStrand	5	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-6.5022
chr19	8799831	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	chr4	132394373	132394451	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	4	-5.5935
chr6	29106053	29106163	protein_coding	Rbm28	intron	ENSMUSG00000029701	ProperStrand	24	chr1	172975158	172975189	tRNA	tRNA699-GlyGCC	.	1681996	ProperStrand	660	1	-10.3666
chr15	84129575	84129593	protein_coding	Parvb	intron	ENSMUSG00000022438	NonProperStrand	6	chr18	35716813	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-6.6008
chr4	131908357	131908464	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr2	41199972	41199989	protein_coding	Lrp1b	exon	ENSMUSG00000049252	ProperStrand	376	2	-6.2597
chr19	59373456	59379444	protein_coding	Pdzd8	utr3	ENSMUSG00000074746	ProperStrand	42	chr16	23110889	23111000	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.3954
chrX	70237450	70237471	miRNA	Mir2137	.	ENSMUSG00000089357	ProperStrand	50	chr18	31769469	31769485	protein_coding	B930094E09Rik	exon	ENSMUSG00000092124	ProperStrand	10	1	-17.3055
chrX	101155182	101155204	protein_coding	Rlim	utr3	ENSMUSG00000056537	ProperStrand	38	chr5	147646771	147646849	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	1	-8.8753
chr9	78023111	78023242	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr11	51551274	51551336	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	5	-6.1766
chr11	78042761	78042779	protein_coding	Supt6h	intron	ENSMUSG00000002052	ProperStrand	119	chr2	34628124	34628164	protein_coding	Hspa5	exon	ENSMUSG00000026864	ProperStrand	181	1	-9.7240
chr6	97122776	97122792	protein_coding	Tmf1	intron	ENSMUSG00000030059	ProperStrand	33	chr3	89034404	89034420	protein_coding	Muc1	exon	ENSMUSG00000042784	ProperStrand	4	1	-19.4693
chr4	95564317	95564334	protein_coding	Fggy	intron	ENSMUSG00000028573	NonProperStrand	15	chr2	145076803	145209255	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-10.5332
chr15	98604924	98606960	protein_coding	Wnt10b	exon	ENSMUSG00000022996	NonProperStrand	189	chr2	26494782	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.2538
chr7	116665127	116665241	protein_coding	Rpl27a	exon	ENSMUSG00000046364	ProperStrand	149	chr6	125136377	125136400	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	1	-4.6693
chr6	71900911	71903014	protein_coding	Polr1a	exon	ENSMUSG00000049553	ProperStrand	109	chr11	116938557	116938647	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-4.9938
chr2	25435029	25435046	lincRNA	Gm17550	exon	ENSMUSG00000092018	ProperStrand	2	chr7	31279279	31279315	protein_coding	Prodh2	exon	ENSMUSG00000036892	ProperStrand	1	1	-inf
chr13	9833553	9833683	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr10	80860700	80860717	protein_coding	Nfic	utr3	ENSMUSG00000055053	ProperStrand	69	3	-11.1451
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chrX	71517922	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-3.7493
chr9	63868723	63868739	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	chr5	115940292	115940380	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	1	-4.1111
chr13	28843546	28843562	lincRNA	2610307P16Rik	intron	ENSMUSG00000085936	ProperStrand	154	chr2	29922026	29922084	protein_coding	Set	utr5	ENSMUSG00000054766	ProperStrand	167	1	-9.3693
chr7	38878611	38878631	SINE	PB1D10	Alu	chr7PB1D1038878595	ProperStrand	1	chr1	71659193	71661979	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	1	-inf
chr7	52378398	52378479	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	chr10	90581049	90581167	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	2	-1.6691
chr3	104764495	104764511	protein_coding	Wnt2b	utr5	ENSMUSG00000027840	NonProperStrand	50	chr7	135036677	135036729	protein_coding	Vkorc1	utr3	ENSMUSG00000030804	ProperStrand	5	1	-18.8567
chr12	104648196	104648238	protein_coding	Ddx24	exon	ENSMUSG00000041645	ProperStrand	34	chr18	33954826	33954916	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	3	-10.9879
mmu-miR-1949	0	21	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr7	86594683	86594729	protein_coding	Fanci	utr3	ENSMUSG00000039187	ProperStrand	25	1	-9.9143
chr2	32881629	32881645	protein_coding	Garnl3	exon	ENSMUSG00000038860	NonProperStrand	54	chr2	26494708	26494760	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.2978
chr9	21242905	21242922	protein_coding	Dnm2	intron	ENSMUSG00000033335	ProperStrand	48	chr4	131908833	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.5413
chr1	102076759	102076791	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	chr9	120038467	120038551	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-0.8318
chr4	109014017	109014090	protein_coding	Eps15	intron	ENSMUSG00000028552	ProperStrand	15	chr4	131865378	131865478	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-6.7250
chr7	3658354	3658400	protein_coding	Rps9	exon	ENSMUSG00000006333	ProperStrand	87	chr10	62802344	62802360	protein_coding	Sirt1	intron	ENSMUSG00000020063	NonProperStrand	116	1	-11.2422
chr2	121176333	121176349	protein_coding	Ppip5k1	exon	ENSMUSG00000033526	ProperStrand	85	chr1	9932584	9932608	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-7.0362
chr16	33694873	33694890	protein_coding	Heg1	intron	ENSMUSG00000075254	ProperStrand	19	chr11	62416608	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-7.4528
chr7	123323278	123323301	protein_coding	Plekha7	intron	ENSMUSG00000045659	ProperStrand	66	chr4	131908689	131908804	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-2.1502
chr4	55431651	55431668	lincRNA	Gm12505	exon	ENSMUSG00000087070	ProperStrand	447	chr11	6428077	6428154	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-0.8520
chr19	8799829	8799900	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	chr10	23506278	23506347	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	3	-1.0173
chr2	25312429	25313191	protein_coding	Clic3	exon	ENSMUSG00000015093	ProperStrand	79	chr8	13416897	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-5.9120
chr5	119090132	119090185	protein_coding	Med13l	intron	ENSMUSG00000018076	ProperStrand	226	chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	1	-6.2065
chr5	67070919	67070951	protein_coding	Uchl1	exon	ENSMUSG00000029223	ProperStrand	29	chr7	116664793	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	5	-16.3249
chr15	72638704	72638722	protein_coding	Trappc9	intron	ENSMUSG00000047921	NonProperStrand	53	chr3	123210907	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-4.0549
chr2	181450622	181451208	protein_coding	Oprl1	exon	ENSMUSG00000027584	ProperStrand	32	chr18	35716788	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-11.2122
chr12	60173951	60173969	protein_coding	Pnn	utr3	ENSMUSG00000020994	ProperStrand	42	chr11	69481333	69481413	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.8588
chr13	76341035	76341055	protein_coding	Fam81b	intron	ENSMUSG00000078966	NonProperStrand	220	chr5	108336363	108336410	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-2.4946
chr7	34992750	34992767	protein_coding	Gpi1	exon	ENSMUSG00000036427	NonProperStrand	40	chr11	69481384	69481421	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.9506
chr5	100855949	100855974	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	1	-2.8127
chrX	138812167	138812190	protein_coding	Acsl4	intron	ENSMUSG00000031278	ProperStrand	31	chr5	115940294	115940406	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	1	-10.0667
chr4	83938091	83938107	protein_coding	Bnc2	exon	ENSMUSG00000028487	ProperStrand	76	chr16	23110525	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.0679
chr1	162226341	162226432	protein_coding	Rabgap1l	intron	ENSMUSG00000026721	ProperStrand	44	chr5	74489635	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-4.3638
chr5	59306468	59306558	LINE	L1Md_F	L1	chr5L1Md_F59304169	ProperStrand	1	chr5	35042098	35042178	protein_coding	Grk4	utr3	ENSMUSG00000052783	ProperStrand	15	1	-inf
chr11	79847207	79847226	protein_coding	Suz12	utr3	ENSMUSG00000017548	ProperStrand	53	chr4	131908238	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.6010
chr15	98570578	98570615	protein_coding	Arf3	utr3	ENSMUSG00000051853	ProperStrand	41	chr5	121655100	121655125	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.4679
chr2	84902583	84902620	protein_coding	Tnks1bp1	exon	ENSMUSG00000033955	ProperStrand	23	chr7	52381972	52382035	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-8.6365
chr7	88934182	88934203	protein_coding-noncoding	3110040N11Rik	exon	ENSMUSG00000025102	ProperStrand	2	chr5	139054804	139054820	protein_coding	Zfp68	intron	ENSMUSG00000058291	NonProperStrand	2	2	-inf
chr5	111111986	111153481	protein_coding	Ep400	exon	ENSMUSG00000029505	ProperStrand	176	chr2	32818804	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	10	-19.7065
chr2	90235315	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	46574854	46574943	protein_coding	Slc22a7	intron	ENSMUSG00000067144	NonProperStrand	5	3	-20.9845
chr14	32479927	32479943	protein_coding	Btd	exon	ENSMUSG00000021900	NonProperStrand	74	chr7	131161105	131161123	protein_coding	Hs3st4	intron	ENSMUSG00000078591	NonProperStrand	10	1	-16.5279
chr4	141132211	141132315	protein_coding	Fblim1	utr3	ENSMUSG00000006219	ProperStrand	26	chr4	116652605	116652624	protein_coding	Zswim5	exon	ENSMUSG00000033948	NonProperStrand	8	1	-18.9810
chr10	80159619	80159694	protein_coding	Mob3a	intron	ENSMUSG00000003348	ProperStrand	1	chr8	13419726	13419742	protein_coding	Grk1	utr3	ENSMUSG00000031450	NonProperStrand	12	1	-inf
chr7	28094315	28094358	protein_coding	Ltbp4	exon	ENSMUSG00000040488	ProperStrand	91	chr1	162965552	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.5395
chr4	154007163	154007179	protein_coding	Prdm16	intron	ENSMUSG00000039410	NonProperStrand	18	chr16	23110828	23110902	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	NonProperStrand	93	1	-14.8731
chr17	59135251	59135267	LTR	ORR1A2	MaLR	chr17ORR1A259135069	NonProperStrand	12	chr7	48780516	48780533	LTR	RMER13A	ERVK	chr7RMER13A48780447	ProperStrand	15	1	-19.3113
chr3	33939985	33944960	protein_coding	Fxr1	exon	ENSMUSG00000027680	ProperStrand	58	chr1	162965570	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.3380
chr2	130102087	130102110	protein_coding-noncoding	Nop56	utr5	ENSMUSG00000027405	ProperStrand	19	chr17	24857715	24857812	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-7.3862
chr5	31505323	31505386	protein_coding	Ppm1g	utr3	ENSMUSG00000029147	ProperStrand	69	chr2	144087323	144087357	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	3	-14.3557
chr9	40865562	40865578	protein_coding	Ubash3b	intron	ENSMUSG00000032020	ProperStrand	42	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-9.6441
chr8	113531470	113531542	protein_coding	Ddx19b	utr3	ENSMUSG00000033658	ProperStrand	30	chr4	116828379	116828453	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	8	-20.1789
chr4	135518127	135518143	protein_coding	Hmgcl	utr3	ENSMUSG00000028672	NonProperStrand	6	chr16	23110960	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.7876
chr8	97429842	97429942	protein_coding	Ccdc102a	exon	ENSMUSG00000063605	ProperStrand	11	chr10	23505149	23505213	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.1476
chr8	77742558	77742574	protein_coding	Rasd2	exon	ENSMUSG00000034472	NonProperStrand	237	chr11	62416575	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	3	-6.8234
chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-4.5022
chr10	79173578	79173625	protein_coding	Bsg	exon	ENSMUSG00000023175	ProperStrand	107	chr1	162966192	162966217	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-6.4286
chr11	100364005	100364026	protein_coding	Acly	intron	ENSMUSG00000020917	ProperStrand	183	chr7	118219575	118219661	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-3.8908
chr18	10079259	10080425	protein_coding	Rock1	exon	ENSMUSG00000024290	ProperStrand	21	chr4	131908294	131908374	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.1622
chr11	62416574	62416657	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	chr17	35087893	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	6	-0.7048
chr11	116535923	116535982	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr11	120650647	120650665	protein_coding	Dus1l	utr3	ENSMUSG00000025155	NonProperStrand	4	1	-11.5504
chr11	109710527	109710617	LINE	L2c	L2	chr11L2c109710515	ProperStrand	1	chr11	109710794	109710874	Simple_repeat	(CAAAA)n	Simple_repeat	chr11(CAAAA)n109710807	NonProperStrand	1	1	-inf
chr2	4544718	4544734	protein_coding	Prpf18	utr3	ENSMUSG00000039449	NonProperStrand	66	chr10	90432659	90432679	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	1	-10.4270
chr17	46796837	46798887	protein_coding	Cul7	exon	ENSMUSG00000038545	ProperStrand	38	chr4	131865855	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-4.4532
chr9	42780501	42780537	protein_coding	Arhgef12	exon	ENSMUSG00000059495	ProperStrand	16	chr17	24665440	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-7.5709
chr19	5286236	5286297	protein_coding	Sf3b2	exon	ENSMUSG00000024853	ProperStrand	102	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-8.3073
chr15	25729980	25737736	protein_coding	Myo10	exon	ENSMUSG00000022272	ProperStrand	168	chr19	8800377	8800459	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	5	-9.0559
chr11	96635806	96638294	protein_coding	Snx11	utr5	ENSMUSG00000020876	NonProperStrand	24	chr4	131865867	131865934	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.3401
chr15	88561424	88561504	protein_coding	Brd1	intron	ENSMUSG00000022387	ProperStrand	70	chr1	78662791	78662881	protein_coding	Utp14b	exon	ENSMUSG00000079470	ProperStrand	8	1	-17.0728
chr8	73080294	73115270	protein_coding	Ell	exon	ENSMUSG00000070002	ProperStrand	32	chr16	23110941	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-6.3608
chr3	107844155	107844171	protein_coding	Gstm4	exon	ENSMUSG00000027890	ProperStrand	4	chr7	150717368	150717425	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-11.1357
chr5	108332825	108333763	protein_coding	Rpl5	exon	ENSMUSG00000058558	ProperStrand	235	chr17	24856672	24856752	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-3.7963
chr15	98434428	98434497	protein_coding	Adcy6	exon	ENSMUSG00000022994	ProperStrand	50	chr7	116664870	116664905	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-4.9887
chr5	118427994	118429831	protein_coding	Fbxo21	exon	ENSMUSG00000032898	ProperStrand	34	chr9	120039538	120039570	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-4.3830
chr19	47332123	47332149	protein_coding	Neurl1a	utr3	ENSMUSG00000006435	ProperStrand	41	chr14	67975508	67975524	protein_coding	Ebf2	intron	ENSMUSG00000022053	ProperStrand	20	1	-16.3385
chr8	37642418	37642632	protein_coding	Dlc1	exon	ENSMUSG00000031523	ProperStrand	89	chr3	95948247	95948901	protein_coding	Otud7b	exon	ENSMUSG00000038495	ProperStrand	11	1	-15.9745
chr17	27207498	27207515	protein_coding	Itpr3	intron	ENSMUSG00000042644	ProperStrand	137	chrX	84483704	84483749	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-6.6080
chr11	78214289	78214306	antisense	Gm11194	.	ENSMUSG00000085747	ProperStrand	35	chr16	23111446	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.0755
chr2	71272257	71276809	protein_coding	Hat1	exon	ENSMUSG00000027018	ProperStrand	53	chr7	116664797	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	7	-18.8745
chr19	43542751	43542768	protein_coding	Cnnm1	exon	ENSMUSG00000025189	NonProperStrand	8	chr18	35342121	35381732	protein_coding	Ctnna1	exon	ENSMUSG00000037815	ProperStrand	115	1	-16.0875
chr1	182823447	182827754	protein_coding	Lefty2	exon	ENSMUSG00000066652	ProperStrand	48	chr10	110918549	110918639	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-6.5229
chr19	10058681	10058734	protein_coding	Fth1	exon	ENSMUSG00000024661	ProperStrand	75	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-7.2828
chr3	87689184	87689204	protein_coding	Prcc	exon	ENSMUSG00000004895	ProperStrand	38	chr3	108357255	108357355	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-5.4259
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr1	162968212	162968287	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-0.7700
chrX	66015163	66015265	protein_coding	Fmr1nb	exon	ENSMUSG00000062170	ProperStrand	7	chr16	23110547	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-6.6152
chr4	46482826	46484316	protein_coding	Anp32b	exon	ENSMUSG00000028333	ProperStrand	229	chr5	147646416	147646477	snoRNA	ENSMUSG00000077185_SNORD102	.	ENSMUSG00000077185	ProperStrand	142	1	-8.9013
chr9	35022498	35022545	protein_coding	Srpr	exon	ENSMUSG00000032042	ProperStrand	54	chr19	8963074	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	8	-21.4556
chr10	128275507	128275540	protein_coding	Sarnp	exon	ENSMUSG00000078427	ProperStrand	9	chr7	29136613	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-9.8851
chr11	91924072	91924162	LINE	L1Md_F2	L1	chr11L1Md_F291921454	NonProperStrand	1	chr12	64110352	64110442	LINE	L1_Mus3	L1	chr12L1_Mus364109077	NonProperStrand	1	1	-inf
chr5	138564421	138564511	protein_coding	Zscan21	intron	ENSMUSG00000037017	ProperStrand	11	chr12	88778642	88778722	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-9.9385
chr14	35124147	35124183	protein_coding	Glud1	exon	ENSMUSG00000021794	ProperStrand	72	chr1	58895481	58895576	protein_coding	Casp8	intron	ENSMUSG00000026029	ProperStrand	2	1	-inf
chr7	104056736	104056754	antisense	Gm15415	.	ENSMUSG00000087304	ProperStrand	8	chr19	8798775	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	2	-14.2677
chr6	70794803	70794820	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chr11	5180669	5180685	protein_coding	Znrf3	utr3	ENSMUSG00000041961	NonProperStrand	210	1	-8.9120
chr17	31668176	31668235	protein_coding	Ndufv3	utr3	ENSMUSG00000024038	ProperStrand	9	chr10	110918637	110918676	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-7.1883
chr12	17552948	17553089	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr16	23110455	23110584	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	39	-2.8726
chr13	84563378	84563468	LINE	L1VL4	L1	chr13L1VL484563340	ProperStrand	1	chr14	11334595	11334675	protein_coding	Fhit	intron	ENSMUSG00000060579	NonProperStrand	51	1	-inf
chr4	82869503	82869519	protein_coding	Ttc39b	utr3	ENSMUSG00000038172	NonProperStrand	12	chr5	121655016	121655097	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-6.9120
chr11	67498727	67498765	protein_coding	Gas7	utr3	ENSMUSG00000033066	ProperStrand	9	chr4	131908687	131908755	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.5343
chr16	20652689	20652717	protein_coding	Psmd2	exon	ENSMUSG00000006998	ProperStrand	99	chr16	38352526	38352570	protein_coding	Cox17	utr3	ENSMUSG00000046516	ProperStrand	5	1	-17.3290
chr8	13189650	13189666	protein_coding	Grtp1	exon	ENSMUSG00000038515	NonProperStrand	12	chr3	108357255	108357355	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	2	-12.5034
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr6	114260511	114260527	protein_coding	Slc6a1	exon	ENSMUSG00000030310	NonProperStrand	147	1	-9.5729
chr4	43505805	43505932	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr9	15130708	15137854	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	7	-5.1404
chr9	103401280	103401296	protein_coding	Tmem108	exon	ENSMUSG00000042757	NonProperStrand	323	chr12	72411179	72411195	protein_coding	Dact1	exon	ENSMUSG00000044548	ProperStrand	11	1	-13.4069
chr12	120235791	120235812	LTR	MLT1G1	MaLR	chr12MLT1G1120235526	ProperStrand	4	chr16	23111725	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-12.0512
chr2	90235315	90235345	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	120294405	120294422	protein_coding	Nploc4	exon	ENSMUSG00000039703	ProperStrand	44	1	-5.0608
chr15	57779265	57779293	protein_coding	Wdr67	intron	ENSMUSG00000022364	ProperStrand	11	chr4	131908689	131908750	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.1344
chr2	92245207	92245224	protein_coding	Cry2	utr3	ENSMUSG00000068742	NonProperStrand	5	chr16	23110900	23110960	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
mmu-miR-6240	1	25	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	5	-6.3122
chrX	103395872	103396009	protein_coding	Pgk1	intron	ENSMUSG00000062070	ProperStrand	484	chr2	32818904	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	2	-3.1466
chr4	115484059	115484083	protein_coding	Atpaf1	utr3	ENSMUSG00000028710	ProperStrand	202	chr1	20988529	20988593	protein_coding	Tram2	utr3	ENSMUSG00000041779	ProperStrand	13	1	-13.9955
chr19	15980463	15980492	protein_coding	Psat1	utr3	ENSMUSG00000024640	ProperStrand	33	chr18	35716806	35716877	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.2115
chr7	146344587	146344608	protein_coding	Stk32c	intron	ENSMUSG00000015981	ProperStrand	4	chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	1	-14.9592
chr19	8964568	8964968	protein_coding	1810009A15Rik	exon	ENSMUSG00000071653	ProperStrand	5	chr18	33954874	33954943	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-8.5187
chr8	78992397	78992487	LINE	L1Md_F2	L1	chr8L1Md_F278987376	ProperStrand	1	chr8	78418802	78418890	protein_coding	1700007B14Rik	intron	ENSMUSG00000031620	NonProperStrand	7	1	-inf
chr2	90235297	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	63922650	64088301	protein_coding	Grid2	intron	ENSMUSG00000071424	NonProperStrand	76	2	-6.7434
chr6	91015192	91015209	protein_coding	Nup210	exon	ENSMUSG00000030091	ProperStrand	140	chr5	89663839	89663855	protein_coding	Slc4a4	exon	ENSMUSG00000060961	NonProperStrand	195	1	-9.2502
chr2	26315096	26315204	protein_coding	Notch1	exon	ENSMUSG00000026923	ProperStrand	145	chr7	29136616	29136634	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-3.2986
chr11	97577859	97577972	protein_coding	Pip4k2b	utr3	ENSMUSG00000018547	ProperStrand	46	chr4	40163387	40163403	protein_coding	Ddx58	exon	ENSMUSG00000040296	ProperStrand	18	7	-21.8722
chr1	155090518	155090585	protein_coding	Lamc1	exon	ENSMUSG00000026478	ProperStrand	239	chr9	120039623	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.0981
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr10	85456343	85456359	protein_coding	Bpifc	intron	ENSMUSG00000050108	ProperStrand	17	1	-8.4333
chr3	86101822	86101865	protein_coding	Lrba	exon	ENSMUSG00000028080	ProperStrand	39	chr3	123071613	123071673	protein_coding	Mettl14	utr3	ENSMUSG00000028114	ProperStrand	2	1	-20.0516
chr18	10052133	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr15	10504979	10504995	protein_coding	Rai14	exon	ENSMUSG00000022246	ProperStrand	180	1	-6.6158
chr11	120440526	120440577	protein_coding	Arhgdia	utr3	ENSMUSG00000025132	ProperStrand	39	chr9	15119720	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.4004
chr19	14672089	14672169	protein_coding	Tle4	utr5	ENSMUSG00000024642	ProperStrand	23	chr12	106269300	106269390	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-6.0077
chr9	65044377	65044425	snRNA	ENSMUSG00000075763_U5	.	ENSMUSG00000075763	ProperStrand	216	chr2	130101985	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	2	-5.1028
chr8	48913388	48913488	protein_coding	Wwc2	utr3	ENSMUSG00000031563	ProperStrand	37	chr15	79913288	79913344	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.5050
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	83678803	83681881	protein_coding	Elovl4	exon	ENSMUSG00000032262	ProperStrand	159	1	-2.6762
chr6	124766918	124772626	protein_coding	Usp5	exon	ENSMUSG00000038429	ProperStrand	35	chr10	23505152	23505270	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-3.7108
chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-1.0113
chr14	32192621	32192701	protein_coding	Sh3bp5	exon	ENSMUSG00000021892	ProperStrand	1	chr7	117189968	117190058	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-inf
chr14	35554158	35554196	protein_coding	Wapal	intron	ENSMUSG00000041408	ProperStrand	93	chr3	123210889	123210979	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.3954
chr5	100855903	100855943	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr4	131908357	131908464	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	1	-1.2145
chr4	120819071	120819161	protein_coding	Rlf	exon	ENSMUSG00000049878	ProperStrand	58	chr10	107800719	107800799	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	1	-8.1384
chr10	80643857	80643976	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr14	57204539	57204555	protein_coding	Parp4	exon	ENSMUSG00000054509	NonProperStrand	113	1	-4.8653
chr4	131908688	131908808	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	chr9	40611661	40611752	snoRNA	ENSMUSG00000075876_Snord14c	.	ENSMUSG00000075876	ProperStrand	104	6	-5.8588
chr11	97489600	97489617	protein_coding	E130012A19Rik	exon	ENSMUSG00000043439	NonProperStrand	110	chr7	16524138	16524219	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	1	-8.5045
chr15	38001723	38001753	protein_coding	Ubr5	intron	ENSMUSG00000037487	ProperStrand	258	chr4	122970392	122970439	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	2	-7.5642
chr10	61732763	61749103	protein_coding	Hk1	exon	ENSMUSG00000037012	ProperStrand	84	chr1	162966208	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	7	-inf
chr4	43249893	43249993	protein_coding	Unc13b	exon	ENSMUSG00000028456	ProperStrand	29	chr2	158182156	158182191	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-6.4333
chr19	46728841	46728958	protein_coding	D19Wsu162e	exon	ENSMUSG00000047731	ProperStrand	16	chr9	15119722	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.1098
chr2	151561285	151566776	protein_coding	Psmf1	exon	ENSMUSG00000032869	ProperStrand	11	chr7	52381719	52381756	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-11.0278
chr1	20798871	20799683	protein_coding	Mcm3	exon	ENSMUSG00000041859	ProperStrand	142	chr7	116664794	116664924	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-2.3295
chr4	104730365	104730382	protein_coding	Prkaa2	intron	ENSMUSG00000028518	ProperStrand	12	chr16	91227718	91227735	protein_coding	Olig2	utr3	ENSMUSG00000039830	NonProperStrand	78	2	-20.4658
chr2	37656747	37657537	protein_coding	Dennd1a	exon	ENSMUSG00000035392	ProperStrand	24	chr17	24857781	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.9467
chr11	3991632	3991649	protein_coding	Mtfp1	utr3	ENSMUSG00000004748	ProperStrand	2	chr2	56967310	56967326	protein_coding	Nr4a2	utr5	ENSMUSG00000026826	NonProperStrand	9	1	-inf
chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr9	103950068	103950086	protein_coding	Uba5	intron	ENSMUSG00000032557	ProperStrand	111	1	-5.2485
chrX	9570939	9570963	protein_coding	Sytl5	intron	ENSMUSG00000054453	ProperStrand	6	chr14	76247725	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-8.8306
chr7	29137513	29137603	protein_coding	Rps16	exon	ENSMUSG00000037563	ProperStrand	191	chr1	89673606	89673686	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-1.3598
chr9	56992483	56992781	protein_coding	Neil1	exon	ENSMUSG00000032298	ProperStrand	7	chr5	54389949	54389967	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	1	-15.2029
chr10	88225617	88227455	protein_coding	Utp20	exon	ENSMUSG00000004356	ProperStrand	45	chr14	33005037	33005084	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-4.5406
chr11	29033923	29034686	protein_coding	Pnpt1	exon	ENSMUSG00000020464	ProperStrand	17	chr16	23111374	23111454	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.3471
chr6	122678164	122678224	protein_coding	Slc2a3	utr3	ENSMUSG00000003153	ProperStrand	682	chr2	168032497	168032542	protein_coding	Adnp	utr5	ENSMUSG00000051149	ProperStrand	48	4	-19.2686
chr1	173433178	173433217	protein_coding	B930036N10Rik	utr3	ENSMUSG00000091993	ProperStrand	150	chr16	23110549	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.0703
chr9	78023110	78023144	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr2	31658371	31658490	protein_coding	Abl1	utr3	ENSMUSG00000026842	ProperStrand	131	1	-4.3674
chr3	125819387	125819477	LTR	MLT1E	MaLR	chr3MLT1E125819358	ProperStrand	1	chr3	125819285	125819365	LTR	ORR1E	MaLR	chr3ORR1E125818995	ProperStrand	1	1	-inf
chr19	10872446	10887839	protein_coding	Cd6	exon	ENSMUSG00000024670	NonProperStrand	5	chr19	8963027	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-11.8268
chr4	131399490	131399506	protein_coding	Mecr	exon	ENSMUSG00000028910	NonProperStrand	109	chr10	24975070	24975086	protein_coding	Akap7	intron	ENSMUSG00000039166	ProperStrand	11	1	-15.5646
chr7	30033174	30033390	protein_coding	2200002D01Rik	exon	ENSMUSG00000030587	ProperStrand	1	chr15	98350146	98350220	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-inf
chr6	83927444	83927565	protein_coding	Zfml	intron	ENSMUSG00000030016	ProperStrand	45	chr10	23505261	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-8.8287
chr8	96697043	96697072	protein_coding	Mt2	exon	ENSMUSG00000031762	ProperStrand	71	chr11	55296257	55296333	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	5	-inf
chr7	26472435	26472451	protein_coding	Tgfb1	utr5	ENSMUSG00000002603	NonProperStrand	154	chr7	116663711	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.0743
chr13	67217198	67217215	LTR	RLTR9E	ERVK	chr13RLTR9E67216909	NonProperStrand	9	chrX	156315498	156315519	protein_coding	Sh3kbp1	intron	ENSMUSG00000040990	ProperStrand	67	1	-16.8976
chrX	74908147	74908174	protein_coding	Tbl1x	utr3	ENSMUSG00000025246	ProperStrand	56	chr7	117189979	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	4	-11.6100
chr7	127775284	127775330	LINE	L1_Mur3	L1	chr7L1_Mur3127774453	NonProperStrand	2	chr16	23110828	23110863	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr8	59992956	59992973	protein_coding	Hmgb2	utr3	ENSMUSG00000054717	ProperStrand	184	chr2	158182214	158182280	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-2.9140
chr11	77349276	77349303	protein_coding	Taok1	utr3	ENSMUSG00000017291	ProperStrand	41	chr9	121762639	121762731	protein_coding	Higd1a	intron	ENSMUSG00000038412	ProperStrand	10	2	-22.0381
chr9	53317828	53317918	protein_coding	Atm	intron	ENSMUSG00000034218	NonProperStrand	7	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-9.3151
chr19	14636527	14636573	protein_coding	Tle4	intron	ENSMUSG00000024642	ProperStrand	23	chr2	26768367	26768433	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-7.5105
chr18	61330972	61331026	protein_coding	Hmgxb3	exon	ENSMUSG00000024622	ProperStrand	25	chr10	23505152	23505255	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.6150
chr10	81071197	81071287	protein_coding	BC025920	utr5	ENSMUSG00000074862	ProperStrand	1	chr16	23110476	23110556	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-inf
chr11	7067186	7069426	protein_coding	Adcy1	exon	ENSMUSG00000020431	ProperStrand	183	chr4	116826697	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-4.6060
chr5	141000555	141000572	protein_coding	Chst12	exon	ENSMUSG00000036599	ProperStrand	7	chr9	118584070	118584133	protein_coding	Itga9	intron	ENSMUSG00000039115	ProperStrand	27	1	-20.1338
chr16	74119320	74119337	protein_coding	Robo2	intron	ENSMUSG00000052516	NonProperStrand	28	chr16	23110828	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.1386
chr16	17284736	17285359	protein_coding	Pi4ka	exon	ENSMUSG00000041720	ProperStrand	39	chr10	23505559	23505626	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-8.4131
chr15	78920196	78920262	protein_coding	Eif3l	exon	ENSMUSG00000033047	ProperStrand	81	chr2	26493423	26493495	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-5.4803
chr7	86599486	86599552	protein_coding	Polg	exon	ENSMUSG00000039176	ProperStrand	93	chr3	123210854	123210891	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-2.6406
chr4	135030013	135030033	protein_coding	Nipal3	intron	ENSMUSG00000028803	ProperStrand	7	chr16	23110909	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.4785
chr7	54442217	54442284	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	chr7	150717331	150717421	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-2.2173
chr8	18669740	18669830	protein_coding	Mcph1	intron	ENSMUSG00000039842	ProperStrand	34	chr9	120039533	120039613	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	10	-19.1245
chr7	29171540	29171558	protein_coding	Med29	utr3	ENSMUSG00000003444	NonProperStrand	134	chr11	97642952	97642973	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.2268
chr9	57809132	57809149	protein_coding	Sema7a	exon	ENSMUSG00000038264	ProperStrand	43	chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-8.4069
chr4	117568858	117568875	protein_coding	Ipo13	intron	ENSMUSG00000033365	ProperStrand	48	chr5	24230013	24230057	protein_coding	Wdr86	intron	ENSMUSG00000055235	ProperStrand	4	1	-19.0980
chr16	11254040	11254090	protein_coding	Gspt1	utr5	ENSMUSG00000062203	ProperStrand	49	chr3	123210891	123210981	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-6.4180
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr12	89699698	89699714	protein_coding	Adck1	utr3	ENSMUSG00000021044	NonProperStrand	42	1	-5.1514
chr14	55130020	55130194	protein_coding	Prmt5	exon	ENSMUSG00000023110	ProperStrand	72	chr19	3715324	3715404	protein_coding	1810055G02Rik	intron	ENSMUSG00000035372	ProperStrand	5	1	-17.9898
chr16	35984149	35984166	protein_coding	Kpna1	intron	ENSMUSG00000022905	ProperStrand	38	chr3	85941963	85942407	protein_coding	Rps3a	exon	ENSMUSG00000028081	ProperStrand	177	2	-19.4451
chr10	72137131	72137231	protein_coding	Zwint	utr3	ENSMUSG00000019923	ProperStrand	22	chr11	69483136	69483192	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.2846
chrX	91435159	91435177	protein_coding	Eif2s3x	utr3	ENSMUSG00000035150	NonProperStrand	83	chr14	76247752	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-6.0546
chr5	112865459	112865476	protein_coding	Sez6l	exon	ENSMUSG00000058153	ProperStrand	81	chr2	26493394	26493485	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-3.1920
chr15	79524622	79537428	protein_coding	Gtpbp1	exon	ENSMUSG00000042535	ProperStrand	56	chr9	120038580	120038670	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	5	-13.8404
chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	chr9	78327265	78327438	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	3	-8.9116
chr10	126773997	126774087	protein_coding	Gli1	intron	ENSMUSG00000025407	ProperStrand	48	chr3	68889031	68889111	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-3.6671
chr2	48760556	48760572	protein_coding	Orc4	utr3	ENSMUSG00000026761	ProperStrand	95	chr16	91227718	91227735	protein_coding	Olig2	utr3	ENSMUSG00000039830	NonProperStrand	78	1	-11.8623
chr9	58373769	58373855	protein_coding	Cd276	utr3	ENSMUSG00000035914	ProperStrand	19	chr16	23109052	23109093	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	2	-15.2461
chr15	76249202	76249292	protein_coding	Heatr7a	intron	ENSMUSG00000022558	NonProperStrand	1	chr1	164039126	164039216	protein_coding	Dnm3	intron	ENSMUSG00000040265	NonProperStrand	8	1	-inf
chr9	66305355	66306011	protein_coding	Herc1	exon	ENSMUSG00000038664	ProperStrand	81	chr4	125842355	125842429	protein_coding	Thrap3	utr3	ENSMUSG00000043962	ProperStrand	84	1	-12.0348
chr11	75126326	75126561	protein_coding	Rpa1	exon	ENSMUSG00000000751	ProperStrand	37	chr6	143046170	143046191	protein_coding	5730419I09Rik	intron	ENSMUSG00000030279	ProperStrand	81	1	-13.6872
chr2	29787167	29787250	protein_coding	Odf2	utr3	ENSMUSG00000026790	ProperStrand	58	chr5	121073816	121073916	protein_coding	Ddx54	exon	ENSMUSG00000029599	ProperStrand	104	1	-12.2785
chr11	53075888	53076410	protein_coding	Hspa4	exon	ENSMUSG00000020361	ProperStrand	69	chr9	110034618	110034718	protein_coding	Smarcc1	utr5	ENSMUSG00000032481	ProperStrand	108	1	-11.8514
chr6	5991364	5991381	protein_coding	Slc25a13	utr3	ENSMUSG00000015112	NonProperStrand	16	chr11	62416991	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-8.6998
chrX	101016707	101016724	protein_coding	Slc16a2	exon	ENSMUSG00000033965	NonProperStrand	5	chr19	8799021	8799052	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-10.9603
chr5	136259285	136259314	protein_coding	Mdh2	exon	ENSMUSG00000019179	ProperStrand	50	chr8	129468746	129468846	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-4.7636
chr6	105889643	105889665	protein_coding	Cntn4	intron	ENSMUSG00000064293	ProperStrand	4	chr11	69483136	69483192	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-7.8378
chr11	83590129	83590209	protein_coding	Heatr6	exon	ENSMUSG00000000976	ProperStrand	67	chr8	73419667	73419757	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	4	-10.1971
chr14	19142777	19142815	protein_coding	Ube2e1	intron	ENSMUSG00000021774	ProperStrand	8	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-8.6552
chr4	131908356	131908460	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chrX	71495074	71495091	protein_coding	Flna	utr5	ENSMUSG00000031328	ProperStrand	134	1	-5.6744
chr7	121148708	121148725	protein_coding	Spon1	intron	ENSMUSG00000038156	NonProperStrand	11	chr2	130101258	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-10.0333
chr4	55431651	55431667	lincRNA	Gm12505	exon	ENSMUSG00000087070	ProperStrand	447	chr2	32818841	32818941	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-1.8359
chr1	129693681	129693781	protein_coding-noncoding	Ccnt2	utr5	ENSMUSG00000026349	ProperStrand	3	chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	1	-16.9448
chr8	109708550	109708634	protein_coding	Cyb5b	utr3	ENSMUSG00000031924	ProperStrand	39	chr16	23111385	23111475	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.9006
chr4	21737942	21737960	protein_coding	Usp45	exon	ENSMUSG00000040455	ProperStrand	40	chr11	62416606	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-5.9611
chr14	56281167	56281267	protein_coding	Nedd8	utr3	ENSMUSG00000010376	ProperStrand	27	chr17	35087894	35087948	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-6.7781
chr14	52832396	52832417	lincRNA	Gm16682	intron	ENSMUSG00000085736	ProperStrand	6	chr2	130101967	130102057	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	3	-19.1292
chr5	108336433	108336488	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	chr19	12086075	12086110	tRNA	tRNA637-ArgTCT	.	472367	ProperStrand	17	2	-11.9159
chr3	55987230	55987246	protein_coding	Nbea	utr5	ENSMUSG00000027799	NonProperStrand	115	chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	1	-7.8874
chr11	115935746	115937022	protein_coding	Unc13d	exon	ENSMUSG00000057948	ProperStrand	89	chr7	29136525	29136575	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.7281
chr11	48616661	48616708	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	chr11	74718931	74719009	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	1	-5.1139
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr1	192777775	192777792	protein_coding	Vash2	intron	ENSMUSG00000037568	ProperStrand	34	1	-9.7364
chr3	9427905	9427965	protein_coding	Zfp704	utr3	ENSMUSG00000040209	ProperStrand	67	chr11	69483189	69483279	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-4.0384
chr6	56810770	56818718	protein_coding	Fkbp9	exon	ENSMUSG00000029781	ProperStrand	39	chr9	107810701	107813856	protein_coding	Mst1r	exon	ENSMUSG00000032584	NonProperStrand	30	1	-15.5881
chrX	71194840	71194896	protein_coding	Hcfc1	exon	ENSMUSG00000031386	ProperStrand	424	chr1	90123798	90124639	protein_coding	Heatr7b1	utr5	ENSMUSG00000079429	ProperStrand	147	1	-7.6078
chr5	10531634	10531724	LTR	ORR1A2	MaLR	chr5ORR1A210531420	ProperStrand	1	chr5	10531330	10531420	LTR	ORR1A4	MaLR	chr5ORR1A410531122	ProperStrand	1	1	-inf
chr1	138313963	138315992	protein_coding	Ddx59	exon	ENSMUSG00000026404	NonProperStrand	1	chr2	26493366	26493487	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-inf
chr6	40426461	40426490	protein_coding	Ssbp1	exon	ENSMUSG00000029911	ProperStrand	5	chr11	97642952	97643034	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-17.6936
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr19	8799587	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-2.6044
chr10	126620435	126620738	protein_coding	Arhgef25	exon	ENSMUSG00000019467	ProperStrand	12	chr4	155544749	155544804	protein_coding	Agrn	exon	ENSMUSG00000041936	ProperStrand	175	1	-14.4400
chr12	60141466	60141507	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	chr8	13876109	13876210	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	8	-13.3620
chr4	83920134	83920224	protein_coding	Bnc2	utr3	ENSMUSG00000028487	ProperStrand	76	chr4	122968596	122968676	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	2	-9.4761
chr11	60718324	60718414	protein_coding	Gm16515	utr3	ENSMUSG00000018931	ProperStrand	5	chr13	51743568	51743648	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-12.0074
chrX	83547356	83547372	protein_coding	Mageb4	intron	ENSMUSG00000035427	NonProperStrand	191	chr2	130101259	130101310	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	2	-7.2302
chr4	6105515	6105595	LINE	L1Md_F3	L1	chr4L1Md_F36104239	ProperStrand	1	chr7	54442557	54442647	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-inf
chr1	162967114	162967178	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	chr14	33005085	33005138	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	3	-1.8302
chr3	22112320	22112350	protein_coding	Tbl1xr1	utr3	ENSMUSG00000027630	ProperStrand	44	chr5	74489599	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	5	-17.6898
chr19	9024829	9025414	protein_coding	Mta2	exon	ENSMUSG00000071646	ProperStrand	70	chr9	15118328	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-5.4734
chr10	30325579	30325659	LINE	L1_Mus2	L1	chr10L1_Mus230325384	NonProperStrand	1	chr11	100181354	100181444	protein_coding	Eif1	utr5	ENSMUSG00000035530	ProperStrand	115	1	-inf
chr14	32042378	32042394	protein_coding	Sema3g	utr3	ENSMUSG00000021904	NonProperStrand	47	chr9	64024466	64024499	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	1	-8.8554
chr13	9833573	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr19	41990105	41990190	protein_coding	Pgam1	exon	ENSMUSG00000011752	ProperStrand	124	2	-6.0728
chr18	10052128	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr5	115940304	115940406	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	8	-19.4606
chr5	122251366	122251466	protein_coding	Atxn2	intron	ENSMUSG00000042605	ProperStrand	83	chr19	8798760	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-4.1815
chr10	121041498	121041589	protein_coding	Xpot	exon	ENSMUSG00000034667	ProperStrand	35	chr7	117166722	117166802	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-5.8692
chr4	120234006	120234023	protein_coding	Ctps	exon	ENSMUSG00000028633	ProperStrand	19	chr8	73419556	73419852	protein_coding	Rpl18a	exon	ENSMUSG00000045128	ProperStrand	394	3	-19.7771
chr15	98604924	98606960	protein_coding	Wnt10b	exon	ENSMUSG00000022996	NonProperStrand	189	chr9	64023021	64023097	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	1	-6.3998
chr6	88435849	88435865	protein_coding	Ruvbl1	exon	ENSMUSG00000030079	NonProperStrand	54	chr1	108068495	108068514	protein_coding	Phlpp1	utr5	ENSMUSG00000044340	ProperStrand	67	1	-13.3052
chr15	98350165	98350255	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	chr1	161270408	161270458	snoRNA	ENSMUSG00000089536_Scarna3a	.	ENSMUSG00000089536	ProperStrand	247	4	-8.1204
chr19	40909991	40910081	protein_coding	Ccnj	intron	ENSMUSG00000025010	ProperStrand	3	chr18	35714186	35714266	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-9.6483
chr4	138953394	139033068	protein_coding	Ubr4	exon	ENSMUSG00000066036	ProperStrand	304	chr1	162967508	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	5	-5.8156
chr19	60941101	60941138	protein_coding	Prdx3	exon	ENSMUSG00000024997	ProperStrand	4	chr17	35087897	35087958	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	2	-17.5721
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr17	56594368	56597640	protein_coding	Ptprs	exon	ENSMUSG00000013236	ProperStrand	152	1	-4.5608
chr10	33721546	33722303	protein_coding	Rwdd1	exon	ENSMUSG00000019782	ProperStrand	7	chr1	162967536	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-7.7490
chr16	37384897	37384913	protein_coding	Stxbp5l	utr5	ENSMUSG00000022829	ProperStrand	332	chr5	65213386	65213402	protein_coding	Klf3	exon	ENSMUSG00000029178	ProperStrand	56	1	-10.0241
chr7	56504431	56504450	protein_coding	Nav2	intron	ENSMUSG00000052512	NonProperStrand	11	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-9.2711
chr13	58229108	58229160	protein_coding	Hnrnpa0	exon	ENSMUSG00000007836	ProperStrand	110	chr1	182261853	182261869	protein_coding	Itpkb	intron	ENSMUSG00000038855	NonProperStrand	27	1	-13.7125
chr9	69972993	69973998	protein_coding	Fam81a	exon	ENSMUSG00000032224	ProperStrand	59	chr14	76247752	76247778	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-4.2039
chr3	90071915	90072015	protein_coding	Dennd4b	intron	ENSMUSG00000042404	ProperStrand	13	chr9	15118333	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-6.4467
chr17	26013001	26013198	protein_coding	0610011F06Rik	exon	ENSMUSG00000025731	ProperStrand	7	chr19	8963025	8963094	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-6.3961
chr2	90235290	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	116533837	116533890	snoRNA	ENSMUSG00000065640_Snord1c	.	ENSMUSG00000065640	ProperStrand	373	1	-1.3272
chr11	69492554	69492643	protein_coding-noncoding	Senp3	utr3	ENSMUSG00000005204	ProperStrand	4	chr7	86611351	86611380	tRNA	tRNA387-ArgTCG	.	494925	ProperStrand	77	4	-inf
chr2	132089143	132089161	protein_coding	Cds2	utr5	ENSMUSG00000058793	NonProperStrand	16	chr18	33954825	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-9.9344
chr9	59534201	59534238	protein_coding	Gramd2	intron	ENSMUSG00000074259	ProperStrand	12	chr2	26494708	26494765	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	3	-14.5665
chr17	42975656	42975686	protein_coding	Cd2ap	exon	ENSMUSG00000061665	ProperStrand	44	chr3	123210854	123210910	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.5877
chr6	128201588	128201976	protein_coding	Tead4	exon	ENSMUSG00000030353	ProperStrand	14	chr7	116664819	116664909	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-5.2856
chr2	125499562	125499579	protein_coding	Eid1	utr3	ENSMUSG00000091337	ProperStrand	60	chr15	34370618	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-3.5492
chr4	155221789	155221806	protein_coding	Dvl1	utr5	ENSMUSG00000029071	ProperStrand	21	chr19	9088814	9088914	protein_coding	Ahnak	exon	ENSMUSG00000069833	ProperStrand	103	1	-14.3574
chr6	72310104	72310121	protein_coding	Rnf181	utr3	ENSMUSG00000055850	NonProperStrand	7	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-12.1558
chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	chr4	56910563	56910630	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-2.2950
chr5	64203925	64203942	protein_coding	0610040J01Rik	intron	ENSMUSG00000060512	ProperStrand	36	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.2292
chr5	137943104	137943141	protein_coding	Pop7	exon	ENSMUSG00000029715	ProperStrand	3	chr16	23111389	23111424	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-6.9982
chr16	20655355	20655438	protein_coding	Psmd2	exon	ENSMUSG00000006998	ProperStrand	99	chr5	138176733	138176751	protein_coding	6430598A04Rik	exon	ENSMUSG00000045348	NonProperStrand	7	1	-16.7969
chr1	154964105	154964181	protein_coding	Nmnat2	utr3	ENSMUSG00000042751	ProperStrand	39	chr7	118219574	118219592	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	3	-11.8281
chr1	173433177	173433247	protein_coding	B930036N10Rik	utr3	ENSMUSG00000091993	ProperStrand	150	chr5	130300460	130300550	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.1066
chr10	75209354	75209405	protein_coding	Cabin1	exon	ENSMUSG00000020196	ProperStrand	62	chr4	131908298	131908341	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-2.6083
chr17	73290678	73290778	protein_coding	Lbh	utr3	ENSMUSG00000024063	ProperStrand	4	chr4	131866238	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-15.0984
chr3	41404083	41405295	protein_coding	Phf17	exon	ENSMUSG00000025764	ProperStrand	101	chr4	147988651	147988668	protein_coding	Tardbp	utr3	ENSMUSG00000041459	ProperStrand	120	1	-10.8751
chr11	106684003	106684019	protein_coding	Smurf2	exon	ENSMUSG00000018363	ProperStrand	79	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-8.3759
chr11	46034913	46036148	protein_coding	Cyfip2	exon	ENSMUSG00000020340	ProperStrand	28	chr7	29136628	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.7309
chr8	64017613	64028377	protein_coding	Palld	exon	ENSMUSG00000058056	NonProperStrand	125	chr2	158182188	158182278	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-3.6122
chr9	122761851	122761952	protein_coding	Zfp445	exon	ENSMUSG00000047036	ProperStrand	8	chr3	123210854	123210899	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.8655
chr17	35257401	35258073	protein_coding	Csnk2b	utr5	ENSMUSG00000024387	ProperStrand	13	chr2	153450618	153450699	protein_coding	Commd7	intron	ENSMUSG00000056941	ProperStrand	1	1	-inf
chr19	14467809	14467828	SINE	B1_Mus2	Alu	chr19B1_Mus214467755	NonProperStrand	1	chr9	15119632	15119684	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-inf
chr14	55682650	55682750	protein_coding	Zfhx2	exon	ENSMUSG00000040721	ProperStrand	18	chr16	23110976	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-3.3354
chr11	71014669	71014687	protein_coding	Nlrp1b	exon	ENSMUSG00000070390	ProperStrand	2	chr10	23505172	23505272	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-inf
chr2	11508506	11508589	protein_coding	Rbm17	exon	ENSMUSG00000037197	ProperStrand	50	chr11	77996559	77996601	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-6.4524
chr6	70794802	70794820	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	1	-6.2397
chr2	35037785	35037875	protein_coding	Rab14	utr3	ENSMUSG00000026878	ProperStrand	21	chr12	88778634	88778724	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-8.6050
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr15	5068407	5068480	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	2	-3.2310
chr14	70182123	70182203	protein_coding	Tnfrsf10b	exon	ENSMUSG00000022074	ProperStrand	57	chr18	35716736	35716826	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	40	-19.9919
chr18	10052133	10052153	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chrX	93136011	93136027	protein_coding	Las1l	exon	ENSMUSG00000057421	ProperStrand	248	1	-5.9865
mmu-miR-1949	2	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr3	96528185	96528285	snoRNA	ENSMUSG00000065669_SNORA5	.	ENSMUSG00000065669	ProperStrand	180	1	-5.9729
chr11	32642622	32644597	protein_coding	Fbxw11	utr3	ENSMUSG00000020271	ProperStrand	36	chr8	32260343	32260425	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	2	-9.2087
chr6	94183785	94183816	protein_coding	Magi1	intron	ENSMUSG00000045095	ProperStrand	106	chr19	8963026	8963126	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-2.6298
chr4	43505733	43505823	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr2	132089145	132089161	protein_coding	Cds2	utr5	ENSMUSG00000058793	NonProperStrand	16	1	-5.5966
chr10	122439825	122439862	protein_coding	Mon2	exon	ENSMUSG00000034602	ProperStrand	28	chr8	73419657	73419712	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.5584
chr12	94833527	94833617	LINE	Lx3A	L1	chr12Lx3A94833332	ProperStrand	1	chr5	130300436	130300516	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-inf
chr2	146855333	146855353	protein_coding	Xrn2	exon	ENSMUSG00000027433	NonProperStrand	2	chr7	30074412	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-17.9063
chr7	51798658	51798678	protein_coding	Pold1	exon	ENSMUSG00000038644	ProperStrand	50	chr3	123210927	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.3689
chr1	37318900	37318924	protein_coding	Cnga3	exon	ENSMUSG00000026114	ProperStrand	3	chr17	32228135	32228151	pseudogene	Pdxk-ps	.	ENSMUSG00000002791	ProperStrand	6	1	-inf
chr8	73812884	73846891	protein_coding	Myo9b	intron	ENSMUSG00000004677	ProperStrand	78	chr10	23505152	23505244	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-2.9655
chr10	110052690	110052707	LINE	L2a	L2	chr10L2a110052646	NonProperStrand	9	chr11	106362637	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-11.2794
chr10	90481806	90483410	protein_coding	Apaf1	exon	ENSMUSG00000019979	ProperStrand	27	chr2	31924012	31924028	protein_coding	Fam78a	utr3	ENSMUSG00000050592	NonProperStrand	340	1	-11.4523
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr5	108334194	108334256	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	3	-0.8760
chr2	181544992	181545011	protein_coding	Myt1	exon	ENSMUSG00000010505	ProperStrand	14	chr19	7496535	7496551	protein_coding	2700081O15Rik	exon	ENSMUSG00000053080	ProperStrand	9	1	-inf
chr8	73923530	73925580	protein_coding	5430437P03Rik	exon	ENSMUSG00000031820	ProperStrand	11	chr8	32260335	32260385	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-8.0215
chr14	21292504	21299004	protein_coding	Anxa7	utr5	ENSMUSG00000021814	ProperStrand	20	chr7	52382755	52382805	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	2	-14.2632
chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	chr8	98270035	98270096	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-1.0744
chr1	152268927	152269668	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	chr15	81066282	81067576	protein_coding	Mchr1	exon	ENSMUSG00000050164	NonProperStrand	1	1	-inf
chr1	55336307	55336324	protein_coding	Boll	intron	ENSMUSG00000025977	ProperStrand	4	chr11	6428090	6428156	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-8.6824
chr9	37192069	37192086	protein_coding	Hepacam	intron	ENSMUSG00000046240	NonProperStrand	29	chr9	15118245	15118268	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-4.8457
chr4	41158916	41165354	protein_coding	Ubap2	exon	ENSMUSG00000028433	ProperStrand	292	chr11	69481397	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-0.7777
chr2	121949510	121949528	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	chr3	123210854	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	5	-2.7832
chr16	30564823	30564893	protein_coding	Lsg1	exon	ENSMUSG00000022538	ProperStrand	25	chr2	130102085	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	3	-16.1053
chr4	137024769	137056981	protein_coding	Hspg2	utr5	ENSMUSG00000028763	ProperStrand	812	chr10	23505559	23505602	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	2	-4.5395
chr10	116511107	116511207	protein_coding	Frs2	exon	ENSMUSG00000020170	ProperStrand	10	chr3	123210853	123210878	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.4047
chr4	132530098	132530117	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	chr15	79747816	79747916	protein_coding	Cbx7	utr3	ENSMUSG00000053411	ProperStrand	62	1	-9.5344
chr18	35102297	35102338	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	chr12	110874223	110874290	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	4	-11.3460
chr6	119889659	119889713	protein_coding	Wnk1	exon	ENSMUSG00000045962	ProperStrand	221	chr11	62416593	62416657	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-2.7418
chr14	3929477	3929503	protein_coding	Gm3002	intron	ENSMUSG00000079399	ProperStrand	26	chr11	55296278	55296334	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	2	-12.5808
chr9	78550961	78550977	protein_coding	Cd109	exon	ENSMUSG00000046186	NonProperStrand	36	chr2	26494710	26494800	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.0523
chr13	23643412	23643451	protein_coding	Hist1h4f	exon	ENSMUSG00000069274	ProperStrand	28	chr16	23110968	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.1386
chr6	54379743	54379760	lincRNA	9130019P16Rik	exon	ENSMUSG00000073067	ProperStrand	255	chr9	78023159	78023183	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	1	-3.1359
chr12	80869607	80869694	protein_coding	Rad51l1	intron	ENSMUSG00000059060	ProperStrand	26	chr17	13115672	13115762	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	1	-9.2159
chr14	52931972	52931989	protein_coding	Sall2	utr3	ENSMUSG00000049532	ProperStrand	15	chr9	120037899	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	11	-20.2452
chr10	23505472	23505786	protein_coding	Rps12	exon	ENSMUSG00000061983	ProperStrand	309	chr7	29136526	29136634	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-1.2931
chr4	43667227	43667273	protein_coding	Hint2	exon	ENSMUSG00000028470	ProperStrand	6	chr7	116664822	116664924	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	6	-inf
chr9	21490619	21490701	protein_coding	Smarca4	exon	ENSMUSG00000032187	ProperStrand	196	chr2	26767757	26767807	snoRNA	ENSMUSG00000064829_SNORD36	.	ENSMUSG00000064829	ProperStrand	98	1	-9.9536
chr4	56910561	56910618	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	NonProperStrand	3	chr18	35714180	35714280	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	NonProperStrand	47	1	-inf
chr9	21543405	21543424	protein_coding	Ldlr	exon	ENSMUSG00000032193	ProperStrand	60	chr17	24857793	24857851	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-4.0928
chr17	34272660	34274115	protein_coding	H2-DMa	exon	ENSMUSG00000037649	ProperStrand	12	chr16	23110876	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	10	-20.2206
chr17	46814084	46814100	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr2	63936034	63936052	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-3.8927
chr17	47881201	47881315	protein_coding	Tfeb	intron	ENSMUSG00000023990	ProperStrand	78	chr4	130324859	130327811	protein_coding	Pum1	exon	ENSMUSG00000028580	ProperStrand	131	5	-19.8929
chr10	110222620	110222710	protein_coding	E2f7	utr3	ENSMUSG00000020185	ProperStrand	30	chr17	24857717	24857797	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	7	-19.9818
chr4	147452628	147452718	protein_coding	Agtrap	utr3	ENSMUSG00000029007	ProperStrand	18	chrX	34622910	34623017	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-9.0217
chr12	8757859	8757892	protein_coding	Pum2	utr3	ENSMUSG00000020594	ProperStrand	39	chr18	35716777	35716877	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.9102
chr7	30231502	30231592	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	chr7	29135837	29135866	protein_coding	Rps16	exon	ENSMUSG00000037563	ProperStrand	191	1	-6.5442
chr2	128627196	128627213	protein_coding	Mertk	exon	ENSMUSG00000014361	ProperStrand	10	chr4	140121137	140121153	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	1	-15.3304
chr3	151883141	151883458	protein_coding	Fubp1	exon	ENSMUSG00000028034	ProperStrand	56	chr8	32260361	32260441	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-4.7627
chr9	103230854	103230964	protein_coding	Topbp1	exon	ENSMUSG00000032555	ProperStrand	81	chr7	149170855	149171340	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	2	-16.7567
chr14	99445710	99445810	protein_coding	6720463M24Rik	utr5	ENSMUSG00000022070	ProperStrand	23	chr8	73419654	73419726	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.9417
chr2	158205283	158205373	snoRNA	ENSMUSG00000064585_SNORA71	.	ENSMUSG00000064585	ProperStrand	418	chr3	96528230	96528310	snoRNA	ENSMUSG00000065669_SNORA5	.	ENSMUSG00000065669	ProperStrand	180	1	-7.2344
chr5	125202269	125202339	protein_coding	Atp6v0a2	utr3	ENSMUSG00000038023	ProperStrand	31	chr11	62590608	62590630	snoRNA	ENSMUSG00000064692_SNORA67	.	ENSMUSG00000064692	ProperStrand	185	3	-19.3956
chr6	144730250	144730268	protein_coding	Sox5	intron	ENSMUSG00000041540	NonProperStrand	49	chr10	62302258	62302307	protein_coding	Tet1	exon	ENSMUSG00000047146	ProperStrand	286	1	-10.5912
chr1	39425082	39426958	protein_coding	Rpl31	exon	ENSMUSG00000073702	ProperStrand	41	chr18	33954816	33954900	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	5	-17.2835
chr9	66343800	66343822	protein_coding	Herc1	exon	ENSMUSG00000038664	ProperStrand	81	chr3	123210851	123210951	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.5972
chr19	10630201	10630217	protein_coding	Tmem216	utr5	ENSMUSG00000024667	ProperStrand	27	chr1	88423450	88425751	protein_coding	Ptma	utr5	ENSMUSG00000026238	ProperStrand	385	1	-11.2035
chr2	164595501	164595887	protein_coding	Ube2c	exon	ENSMUSG00000001403	ProperStrand	40	chr4	131908689	131908750	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.8200
chr1	87983864	87983897	protein_coding	Psmd1	intron	ENSMUSG00000026229	ProperStrand	664	chr12	60141454	60141509	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-2.3178
chr11	105783962	105783978	protein_coding	Tanc2	exon	ENSMUSG00000053580	ProperStrand	13	chr10	39978403	39978484	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-8.5316
chr3	157321921	157322013	Simple_repeat	(TC)n	Simple_repeat	chr3(TC)n157321907	ProperStrand	4	chr5	108336937	108337017	protein_coding	Rpl5	utr3	ENSMUSG00000058558	ProperStrand	235	4	-inf
chr11	69548532	69560691	protein_coding	Polr2a	exon	ENSMUSG00000005198	ProperStrand	200	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-0.9599
chr11	9031680	9031712	protein_coding	Upp1	exon	ENSMUSG00000020407	ProperStrand	73	chr1	162965979	162966041	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-3.2441
chr14	78240002	78240033	protein_coding	Dnajc15	exon	ENSMUSG00000022013	ProperStrand	2	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	1	-14.4896
chr11	98551963	98552241	protein_coding	Psmd3	exon	ENSMUSG00000017221	ProperStrand	51	chr11	6428060	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-5.9479
chr11	107487933	107487949	protein_coding	Helz	exon	ENSMUSG00000020721	ProperStrand	60	chr11	69481399	69481432	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.2006
chr8	87047062	87057333	protein_coding	Cacna1a	exon	ENSMUSG00000034656	ProperStrand	35	chr4	131908689	131908734	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-7.8445
chr7	29700265	29701214	protein_coding	Actn4	exon	ENSMUSG00000054808	ProperStrand	120	chr7	116664841	116664921	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.4444
chr1	62686775	62686791	protein_coding	Pard3b	utr3	ENSMUSG00000046526	ProperStrand	31	chr8	13876176	13876225	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-8.4674
chr4	142724976	142725066	protein_coding	Prdm2	exon	ENSMUSG00000057637	ProperStrand	46	chr7	117189976	117190056	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.8238
chr2	167836657	167836679	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	chr11	5180669	5180685	protein_coding	Znrf3	utr3	ENSMUSG00000041961	NonProperStrand	210	1	-9.6212
chr5	100855902	100855942	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr9	41782189	41784462	protein_coding	Sorl1	exon	ENSMUSG00000049313	ProperStrand	112	1	-5.4118
chr4	11473376	11473392	protein_coding	1110037F02Rik	exon	ENSMUSG00000040720	ProperStrand	32	chr4	135607600	135608485	protein_coding	Rpl11	exon	ENSMUSG00000059291	ProperStrand	152	1	-12.7179
chr17	35299507	35299607	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	chr15	79908929	79909013	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	8	-1.2814
chr17	35045600	35045617	protein_coding	Ehmt2	exon	ENSMUSG00000013787	ProperStrand	42	chr4	131865856	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-4.1816
chr12	85493185	85493285	protein_coding	C130039O16Rik	utr3	ENSMUSG00000042507	ProperStrand	75	chr2	145077956	145209255	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-7.2788
chr5	37510021	37510111	protein_coding	Jakmip1	exon	ENSMUSG00000063646	ProperStrand	21	chr14	52829497	52829569	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-10.3236
chr11	80571453	80571470	protein_coding	Myo1d	intron	ENSMUSG00000035441	NonProperStrand	24	chr17	24856708	24856753	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-8.2622
chr9	63042015	63042031	protein_coding	Map2k5	exon	ENSMUSG00000058444	ProperStrand	193	chr11	106362643	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-5.1084
chr14	27353658	27353677	protein_coding	Slmap	utr5	ENSMUSG00000021870	ProperStrand	9	chr4	131908356	131908450	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.8019
chr9	78327224	78327327	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr2	26768379	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	7	-4.5172
chr11	48614367	48614434	snoRNA	ENSMUSG00000064500_SNORD95	.	ENSMUSG00000064500	ProperStrand	100	chr1	162967527	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-2.5642
chr14	58243422	58243465	protein_coding	Xpo4	intron	ENSMUSG00000021952	ProperStrand	39	chr9	107741190	107741275	protein_coding	Rbm6	intron	ENSMUSG00000032582	ProperStrand	9	2	-19.6868
chr19	56512736	56512758	protein_coding	Casp7	intron	ENSMUSG00000025076	ProperStrand	6	chrX	71517822	71517922	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	2	-17.7712
chr18	90711491	90711510	protein_coding	Tmx3	utr3	ENSMUSG00000024614	NonProperStrand	1	chr17	24857713	24857795	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-inf
chr4	32836661	32836726	protein_coding	Mdn1	exon	ENSMUSG00000058006	ProperStrand	184	chr7	116664832	116664919	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-0.8817
chr10	80674669	80675224	protein_coding	Atcay	exon	ENSMUSG00000034958	ProperStrand	94	chr1	54460420	54461829	protein_coding	Gtf3c3	exon	ENSMUSG00000041303	ProperStrand	11	1	-15.8484
chr4	48671767	48674925	protein_coding	Tmeff1	exon	ENSMUSG00000028347	ProperStrand	47	chr7	117189953	117190033	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.7835
chr17	28466007	28466130	protein_coding-noncoding	Rpl10a	utr5	ENSMUSG00000037805	ProperStrand	14	chr16	23110971	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-8.6732
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr5	118444628	118445436	protein_coding	Fbxo21	exon	ENSMUSG00000032898	ProperStrand	34	1	-7.5008
chrX	140804203	140804303	protein_coding-noncoding	Alg13	utr3	ENSMUSG00000041718	ProperStrand	87	chr2	26494708	26494789	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-4.3358
chr12	106002200	106028890	protein_coding	Clmn	intron	ENSMUSG00000021097	ProperStrand	50	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-9.1115
chr8	113636624	113636651	protein_coding	Pdpr	exon	ENSMUSG00000033624	ProperStrand	49	chr1	88247738	88247798	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	2	-8.9974
chr16	37777391	37777408	protein_coding	Fstl1	exon	ENSMUSG00000022816	ProperStrand	179	chrX	71517821	71517937	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-4.4203
chr5	122894229	122894319	protein_coding	Anapc7	utr3	ENSMUSG00000029466	ProperStrand	11	chr16	23110853	23110933	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.6241
chr6	86477174	86477191	lincRNA	1600020E01Rik	exon	ENSMUSG00000086488	NonProperStrand	10	chr18	35716810	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-5.5279
chr7	119253776	119253792	protein_coding	Usp47	utr3	ENSMUSG00000059263	ProperStrand	40	chr9	120038000	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-5.4940
chr7	17641846	17641863	protein_coding	Hif3a	intron	ENSMUSG00000004328	NonProperStrand	2	chr11	62416992	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-13.4790
chrX	159228295	159228311	protein_coding	Txlng	utr3	ENSMUSG00000038344	NonProperStrand	5	chr9	120039585	120039675	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-8.3145
chr3	58480175	58480222	protein_coding	Siah2	exon	ENSMUSG00000036432	ProperStrand	1	chr8	129468854	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-inf
chr7	108489094	108489184	protein_coding	Stard10	intron	ENSMUSG00000030688	NonProperStrand	2	chr10	110918550	110918630	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-10.7503
chr7	88489215	88489244	protein_coding	Rps17	exon	ENSMUSG00000061787	ProperStrand	105	chr1	162966002	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-4.5596
chr10	120709244	120712786	protein_coding	Tbc1d30	exon	ENSMUSG00000052302	ProperStrand	233	chr5	108334195	108334250	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-2.3441
chr15	79913314	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr17	71990923	71990981	snoRNA	ENSMUSG00000092713_CT010429.1	.	ENSMUSG00000092713	ProperStrand	182	1	-1.6950
chr6	67221248	67222015	protein_coding	Serbp1	exon	ENSMUSG00000036371	ProperStrand	261	chr3	123210853	123210970	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	5	-2.9137
chr17	24665444	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	chr13	23399498	23399534	tRNA	tRNA98-ValCAC	.	201328	ProperStrand	17	1	-7.4472
chr4	116883517	116883550	snRNA	ENSMUSG00000070237_U5	.	ENSMUSG00000070237	ProperStrand	154	chr5	115939539	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-5.9991
chr14	29324482	29324508	lincRNA	Gm2670	intron	ENSMUSG00000091966	ProperStrand	3	chr15	78912314	78914581	protein_coding	Eif3l	exon	ENSMUSG00000033047	ProperStrand	81	2	-22.8684
chr7	73270421	73270479	protein_coding	Chsy1	exon	ENSMUSG00000032640	ProperStrand	25	chr7	116664819	116664909	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-4.1486
chr5	111213652	111213742	protein_coding	Ulk1	utr3	ENSMUSG00000029512	ProperStrand	92	chr3	123210901	123210981	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-2.6660
chr3	96361993	96364664	protein_coding	Txnip	utr5	ENSMUSG00000038393	ProperStrand	172	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-2.8392
chr15	76734835	76735006	protein_coding	Rpl8	exon	ENSMUSG00000003970	ProperStrand	191	chr19	8799054	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	2	-6.1268
chr4	122968584	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	chr11	62416994	62417012	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	2	-0.8288
chr10	3496113	3496129	protein_coding	Oprm1	utr3	ENSMUSG00000000766	NonProperStrand	11	chr2	29759592	29768153	protein_coding	Odf2	exon	ENSMUSG00000026790	ProperStrand	58	1	-16.8588
chr19	47590583	47590683	protein_coding	Obfc1	exon	ENSMUSG00000042694	ProperStrand	4	chr18	35716822	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-7.5042
chr2	158185529	158185654	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr2	158182154	158182285	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	10	-6.4069
chr10	122477413	122477435	protein_coding	Mon2	intron	ENSMUSG00000034602	ProperStrand	28	chr14	76247724	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	4	-17.1721
chr3	51275426	51276561	protein_coding	Naa15	exon	ENSMUSG00000063273	ProperStrand	34	chr3	123210853	123210891	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.0438
chr14	119693352	119693368	protein_coding	Hs6st3	intron	ENSMUSG00000053465	NonProperStrand	134	chr11	106362642	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-5.8172
chr2	130513204	130513372	protein_coding	Slc4a11	exon	ENSMUSG00000074796	ProperStrand	15	chr4	131908691	131908771	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.5353
chr12	81268630	81285808	protein_coding	Actn1	exon	ENSMUSG00000015143	ProperStrand	128	chr8	32260335	32260418	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	2	-5.5097
chr18	46892819	46892861	protein_coding	Atg12	utr3	ENSMUSG00000032905	ProperStrand	4	chr16	23110903	23110938	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.6489
chr11	51457880	51457946	protein_coding	N4bp3	exon	ENSMUSG00000001053	ProperStrand	45	chr15	82725599	82725636	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	1	-9.1000
chr3	153570576	153570625	protein_coding	Rabggtb	exon	ENSMUSG00000038975	ProperStrand	667	chr9	78215625	78215685	protein_coding	Dppa5a	exon	ENSMUSG00000060461	ProperStrand	79	2	-12.6841
chr11	83755692	83755708	protein_coding	Ddx52	exon	ENSMUSG00000020677	NonProperStrand	5	chr4	116826533	116826905	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	1	-15.5158
chr4	104709839	104709929	protein_coding	Prkaa2	intron	ENSMUSG00000028518	ProperStrand	12	chr5	130300460	130300540	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-9.1930
chr11	109116348	109116427	protein_coding	Rgs9	intron	ENSMUSG00000020599	ProperStrand	18	chr10	120849375	120849391	protein_coding	Rassf3	utr3	ENSMUSG00000025795	ProperStrand	26	1	-17.2234
chr2	90235298	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	34224768	34363538	protein_coding	Dst	exon	ENSMUSG00000026131	ProperStrand	461	4	-4.7447
chr1	53034781	53034871	LINE	L1Md_T	L1	chr1L1Md_T53033000	ProperStrand	1	chr7	54442904	54442984	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-inf
chr2	25078686	25078703	protein_coding	Tubb4b	exon	ENSMUSG00000036752	ProperStrand	58	chr18	35716753	35716884	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-6.0227
chr10	5990202	5990247	protein_coding	Akap12	utr3	ENSMUSG00000038587	ProperStrand	1008	chr19	8800355	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	7	-2.4862
chr19	11015616	11015632	protein_coding	Gpr44	exon	ENSMUSG00000034117	NonProperStrand	118	chr7	29136525	29136587	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.3147
chr6	4940091	4940107	protein_coding	Ppp1r9a	intron	ENSMUSG00000032827	ProperStrand	50	chr12	109513512	109513530	protein_coding	Ccdc85c	utr5	ENSMUSG00000084883	ProperStrand	157	1	-11.7511
chr1	88423435	88423484	protein_coding	Ptma	utr5	ENSMUSG00000026238	ProperStrand	385	chr2	18764040	18764056	protein_coding	Pip4k2a	utr3	ENSMUSG00000026737	NonProperStrand	15	1	-12.4091
chr8	80041484	80041501	protein_coding	Arhgap10	intron	ENSMUSG00000037148	ProperStrand	58	chr6	86475392	86475468	protein_coding	Pcbp1	exon	ENSMUSG00000051695	ProperStrand	108	1	-12.2013
chr4	146853375	146853460	lincRNA	Gm16889	intron	ENSMUSG00000084976	NonProperStrand	2	chr2	41199972	41199989	protein_coding	Lrp1b	exon	ENSMUSG00000049252	ProperStrand	376	1	-17.0725
chr11	104286254	104286344	protein_coding	1700081L11Rik	exon	ENSMUSG00000018412	ProperStrand	73	chr4	116827118	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-6.6512
chr11	97891134	97891610	protein_coding	Rpl19	exon	ENSMUSG00000017404	ProperStrand	120	chr3	123210854	123210875	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-3.3286
chr13	73953277	73953360	protein_coding	Slc12a7	utr3	ENSMUSG00000017756	ProperStrand	80	chr12	106269284	106269302	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	3	-8.9131
chr18	24050335	24050352	protein_coding	Mapre2	utr3	ENSMUSG00000024277	NonProperStrand	7	chr11	117575596	117575614	protein_coding	Tnrc6c	exon	ENSMUSG00000025571	NonProperStrand	3	1	-inf
chr9	72595233	72595252	protein_coding	Nedd4	utr3	ENSMUSG00000032216	ProperStrand	308	chr4	131865394	131865484	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-1.2543
chr2	172825858	172825875	protein_coding	Rae1	utr5	ENSMUSG00000027509	NonProperStrand	44	chr19	44188519	44188612	snoRNA	ENSMUSG00000077391_SNORA12	.	ENSMUSG00000077391	ProperStrand	506	1	-9.6688
chr15	98676783	98676819	protein_coding	Mll2	exon	ENSMUSG00000048154	ProperStrand	170	chr7	147125973	147125989	protein_coding	Kndc1	utr3	ENSMUSG00000066129	ProperStrand	15	1	-14.0468
chr16	3856858	3856878	protein_coding	Zfp174	utr3	ENSMUSG00000054939	NonProperStrand	166	chr9	15119305	15119425	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	3	-8.0420
chr10	88289487	88289503	protein_coding	Utp20	utr5	ENSMUSG00000004356	ProperStrand	45	chr12	17552953	17553090	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	5	-inf
chr1	20552542	20552558	protein_coding	Pkhd1	exon	ENSMUSG00000043760	NonProperStrand	49	chr3	123210854	123210923	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-4.2650
chr11	41728880	41728896	protein_coding	Gabrg2	utr3	ENSMUSG00000020436	ProperStrand	1	chr9	120038467	120038552	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-inf
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr10	79620503	79620621	protein_coding	Midn	utr3	ENSMUSG00000035621	ProperStrand	36	1	-7.3861
chr4	130298951	130298983	protein_coding	Pum1	intron	ENSMUSG00000028580	ProperStrand	131	chr7	117189863	117189973	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	3	-5.4653
chr5	104283007	104283024	protein_coding	Aff1	utr3	ENSMUSG00000029313	ProperStrand	82	chr8	107783510	107783527	protein_coding	Tradd	exon	ENSMUSG00000031887	ProperStrand	23	1	-14.6232
chr11	78101710	78101727	protein_coding	2610507B11Rik	exon	ENSMUSG00000010277	ProperStrand	246	chr9	120039552	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	4	-4.8055
chr11	94906969	94907059	protein_coding	Itga3	exon	ENSMUSG00000001507	ProperStrand	21	chr7	29136541	29136621	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	4	-13.9868
chr11	17846865	17846965	protein_coding	Etaa1	exon	ENSMUSG00000016984	ProperStrand	7	chr15	34370545	34370613	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-7.8301
chr12	81284431	81322519	protein_coding	Actn1	exon	ENSMUSG00000015143	ProperStrand	128	chr11	6428035	6428156	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-5.2758
chr13	56731033	56731079	protein_coding	Tgfbi	exon	ENSMUSG00000035493	ProperStrand	9	chr11	62418037	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-9.4009
chr2	164589058	164589114	antisense	Gm11457	.	ENSMUSG00000086453	ProperStrand	7	chr5	130300470	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-6.6707
chr14	55056594	55056612	protein_coding	Mmp14	intron	ENSMUSG00000000957	ProperStrand	61	chr11	68886970	68887002	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-4.1127
chr2	90235308	90235341	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	54434992	54435008	protein_coding	Idh3a	intron	ENSMUSG00000032279	ProperStrand	8	1	-8.5166
chr3	67161283	67161299	protein_coding	Rsrc1	utr3	ENSMUSG00000034544	NonProperStrand	71	chr11	6428103	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.8910
chr10	126433890	126433964	protein_coding	Ctdsp2	utr3	ENSMUSG00000078429	ProperStrand	74	chr7	150717301	150717348	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	6	-21.0607
chr15	82007907	82007978	protein_coding	Srebf2	exon	ENSMUSG00000022463	ProperStrand	592	chr15	79908939	79908956	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-1.4175
chr5	104280349	104280391	protein_coding	Aff1	utr3	ENSMUSG00000029313	ProperStrand	82	chr11	65644887	65644903	protein_coding	Dnahc9	utr3	ENSMUSG00000056752	NonProperStrand	13	1	-15.7976
chr19	41992985	41993025	protein_coding	Pgam1	utr3	ENSMUSG00000011752	ProperStrand	124	chr3	123210854	123210923	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-1.9948
chr2	158184090	158184118	lincRNA	9430008C03Rik	exon	ENSMUSG00000085385	ProperStrand	1039	chr2	158184117	158184207	snoRNA	ENSMUSG00000064995_SNORA71	.	ENSMUSG00000064995	ProperStrand	430	4	-12.3703
chr14	58258051	58258141	protein_coding	Xpo4	intron	ENSMUSG00000021952	ProperStrand	39	chr4	131908874	131908896	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-9.6137
chr6	39355633	39355723	protein_coding	Mkrn1	utr3	ENSMUSG00000029922	ProperStrand	177	chr4	56886851	56886931	protein_coding	D730040F13Rik	utr3	ENSMUSG00000055296	ProperStrand	48	2	-17.9904
chr8	98263754	98263771	protein_coding	Cnot1	exon	ENSMUSG00000036550	NonProperStrand	2	chr13	76341035	76341055	protein_coding	Fam81b	intron	ENSMUSG00000078966	NonProperStrand	220	1	-18.7313
chr4	149968604	149968626	protein_coding	Rere	intron	ENSMUSG00000039852	ProperStrand	76	chr7	52382234	52382291	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-7.8112
chr1	194571764	194571802	snRNA	ENSMUSG00000064881_U5	.	ENSMUSG00000064881	ProperStrand	187	chr2	26493363	26493463	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-1.7783
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr18	84889628	84889646	lincRNA	D030046N08Rik	exon	ENSMUSG00000089760	ProperStrand	10	1	-8.0457
chr15	72775186	72775222	protein_coding	Trappc9	intron	ENSMUSG00000047921	ProperStrand	44	chr11	97643003	97643092	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.0151
chr18	44551188	44551278	protein_coding	Dcp2	intron	ENSMUSG00000024472	ProperStrand	44	chr17	24857719	24857799	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.8314
chr1	166368556	166368629	protein_coding	Atp1b1	exon	ENSMUSG00000026576	ProperStrand	67	chr19	8963077	8963167	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.0927
chr13	36209855	36209871	protein_coding	Fars2	utr5	ENSMUSG00000021420	ProperStrand	19	chr3	104459489	104459553	protein_coding	Slc16a1	exon	ENSMUSG00000032902	ProperStrand	48	1	-16.1004
chr5	34976592	34976808	protein_coding	Mfsd10	exon	ENSMUSG00000001082	ProperStrand	38	chr17	24857815	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.0936
chr8	112073793	112082895	protein_coding	Dhx38	exon	ENSMUSG00000037993	ProperStrand	27	chr9	15118233	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-8.2562
chr11	80080114	80080131	protein_coding	Rhot1	utr3	ENSMUSG00000017686	NonProperStrand	48	chr11	106362640	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-7.8503
chr5	75473198	75473215	protein_coding	Gsx2	utr3	ENSMUSG00000035946	ProperStrand	307	chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	2	-7.5345
chr11	72262411	72264933	protein_coding	Mybbp1a	exon	ENSMUSG00000040463	ProperStrand	279	chr7	117189955	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	5	-5.8560
chr4	116827011	116827299	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	chr18	33954816	33954906	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-1.1121
chr11	93824631	93827126	protein_coding	Nme1	exon	ENSMUSG00000037601	ProperStrand	12	chr1	64779090	64779118	protein_coding	Fzd5	utr3	ENSMUSG00000045005	ProperStrand	175	1	-14.4400
chr15	36527813	36527844	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr11	35380172	35380189	protein_coding	Slit3	intron	ENSMUSG00000056427	ProperStrand	61	1	-7.8497
chr11	94335391	94335407	protein_coding	Cacna1g	utr5	ENSMUSG00000020866	ProperStrand	35	chr18	35714194	35714290	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	3	-10.7372
chr1	9930689	9930789	protein_coding	6030422M02Rik	utr3	ENSMUSG00000046101	NonProperStrand	2	chr9	15119722	15119969	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-9.8289
chr14	25311032	25311146	protein_coding	Rps24	exon	ENSMUSG00000025290	ProperStrand	110	chr11	62418015	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	2	-7.3058
chr15	80851317	80852865	protein_coding	Mkl1	exon	ENSMUSG00000042292	ProperStrand	57	chr6	115757992	115758082	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-5.5723
chrX	34622906	34623025	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	chr1	162966812	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	11	-0.8203
chr4	133628939	133628955	protein_coding	Aim1l	exon	ENSMUSG00000012123	ProperStrand	32	chr19	11857619	11859888	protein_coding	Stx3	exon	ENSMUSG00000041488	ProperStrand	37	1	-15.5548
chr1	45488603	45488620	protein_coding	Col5a2	intron	ENSMUSG00000026042	ProperStrand	184	chr11	65663424	65663442	protein_coding	Dnahc9	exon	ENSMUSG00000056752	ProperStrand	4	1	-16.7781
chr2	73445776	73445856	antisense	Gm13704	.	ENSMUSG00000086544	ProperStrand	3	chr2	79708658	79708748	protein_coding	Pde1a	intron	ENSMUSG00000059173	ProperStrand	5	1	-inf
chr4	43016698	43016788	protein_coding	Fancg	exon	ENSMUSG00000028453	ProperStrand	13	chr16	23111387	23111467	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.8569
chr5	114221361	114221441	protein_coding	Sart3	exon	ENSMUSG00000018974	NonProperStrand	1	chr16	23111727	23111817	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	NonProperStrand	47	1	-inf
chr11	117634858	117634961	protein_coding	Tmc6	intron	ENSMUSG00000025572	ProperStrand	60	chr2	145077955	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-7.7234
chr1	38075921	38076021	protein_coding	Eif5b	exon	ENSMUSG00000026083	ProperStrand	118	chr2	130103434	130103500	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-6.7187
chr11	50014067	50014113	protein_coding	Sqstm1	utr3	ENSMUSG00000015837	ProperStrand	36	chr7	117190018	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-7.1819
chr9	59244236	59244316	protein_coding	Arih1	exon	ENSMUSG00000025234	ProperStrand	75	chr8	13952808	13952898	protein_coding	2610019F03Rik	utr3	ENSMUSG00000050052	ProperStrand	4	1	-18.3623
chr15	102167275	102167338	protein_coding	Myg1	exon	ENSMUSG00000001285	ProperStrand	12	chr1	88252838	88252864	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	2	-15.7406
chr18	67848615	67848635	protein_coding	Ptpn2	exon	ENSMUSG00000024539	ProperStrand	35	chr19	8963027	8963127	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.2191
chrX	162938810	162938906	protein_coding	Tceanc	utr3	ENSMUSG00000051224	ProperStrand	4	chr8	93575778	93575840	protein_coding	Chd9	exon	ENSMUSG00000056608	ProperStrand	35	1	-inf
chr11	20012670	20012691	protein_coding	Actr2	intron	ENSMUSG00000020152	NonProperStrand	17	chr11	62418038	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-8.0799
chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	chr2	119793054	119793111	protein_coding	Mga	utr3	ENSMUSG00000033943	ProperStrand	180	1	-6.8768
chr13	99628501	99629743	protein_coding	Tnpo1	exon	ENSMUSG00000009470	ProperStrand	56	chr17	35089181	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-5.6202
chr7	30041817	30043187	protein_coding	Spint2	exon	ENSMUSG00000074227	ProperStrand	82	chr19	8963027	8963083	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.7714
chr15	79502908	79503008	protein_coding	Tomm22	utr3	ENSMUSG00000022427	ProperStrand	7	chr3	123210883	123210939	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-6.1463
chr2	69660656	69660672	protein_coding	Klhl23	utr5	ENSMUSG00000042155	NonProperStrand	1	chr10	39978385	39978485	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-inf
chr6	78763206	78763224	LTR	RMER20B	ERVK	chr6RMER20B78762903	NonProperStrand	4	mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	1	-11.5428
chr16	57513466	57513482	protein_coding	Filip1l	exon	ENSMUSG00000043336	ProperStrand	269	chr11	69481396	69481433	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-0.8714
chr16	22392748	22392848	protein_coding	Etv5	exon	ENSMUSG00000013089	ProperStrand	88	chr7	67123693	67123715	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	1	-8.7711
chr13	55416082	55416367	protein_coding	Nsd1	utr3	ENSMUSG00000021488	ProperStrand	186	chr11	62416597	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	4	-10.4280
chrX	150765543	150765559	LINE	L1_Mus2	L1	chrXL1_Mus2150765117	NonProperStrand	49	chr10	126459573	126459668	protein_coding	Tsfm	utr3	ENSMUSG00000040521	ProperStrand	7	1	-18.6027
chr13	113751399	113751479	protein_coding	Dhx29	exon	ENSMUSG00000042426	ProperStrand	15	chr11	69483181	69483271	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-12.0911
chr15	82980086	82980192	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	NonProperStrand	6	chr16	23110965	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	NonProperStrand	93	1	-17.0255
chr3	153575089	153575168	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	chr4	116828431	116828447	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-3.6948
chr19	10689364	10699721	protein_coding	Ddb1	exon	ENSMUSG00000024740	ProperStrand	304	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-2.6407
chr5	33082340	33082366	protein_coding	Pisd	intron	ENSMUSG00000023452	ProperStrand	9	chr18	35716700	35716790	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-5.7446
chr17	85482653	85489599	protein_coding	Prepl	utr5	ENSMUSG00000024127	ProperStrand	106	chr8	86623005	86623059	protein_coding	Dcaf15	exon	ENSMUSG00000037103	ProperStrand	32	1	-13.4403
mmu-miR-292a-3p	1	24	miRNA	mmu-miR-292a-3p	.	mmu-miR-292a-3p	ProperStrand	38	chr4	131865910	131865987	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-4.4532
chr11	98575398	98575770	protein_coding	Med24	exon	ENSMUSG00000017210	ProperStrand	28	chr6	115758082	115758130	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-6.9821
chr18	57400307	57400324	protein_coding	Megf10	exon	ENSMUSG00000024593	ProperStrand	143	chr17	24856701	24856754	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-4.7338
chr12	80183309	80183350	protein_coding	Pigh	utr3	ENSMUSG00000021120	ProperStrand	13	chr7	116664794	116664884	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	5	-inf
chr8	77742558	77742574	protein_coding	Rasd2	exon	ENSMUSG00000034472	NonProperStrand	237	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-3.3827
chr2	161350192	161350209	protein_coding	Ptprt	utr3	ENSMUSG00000053141	NonProperStrand	46	chr4	131908355	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.8186
chr2	90857789	90857805	protein_coding	Celf1	utr3	ENSMUSG00000005506	NonProperStrand	28	chr8	126454815	126454886	protein_coding	Nup133	exon	ENSMUSG00000039509	ProperStrand	59	1	-14.8860
chr17	45705026	45705063	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr5	123622050	123622066	protein_coding	Hpd	exon	ENSMUSG00000029445	ProperStrand	254	1	-3.9379
chr15	79913288	79913334	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr7	54101272	54103050	protein_coding	Ldha	exon	ENSMUSG00000063229	ProperStrand	280	1	-1.0873
chr11	69375311	69375401	protein_coding	Wrap53	exon	ENSMUSG00000041346	ProperStrand	14	chr4	131865411	131865491	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-6.8658
chr9	43612630	43612665	protein_coding	Pvrl1	utr3	ENSMUSG00000032012	ProperStrand	45	chr12	112779250	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-5.3344
chr10	80264243	80265148	protein_coding	Sf3a2	exon	ENSMUSG00000020211	ProperStrand	50	chr12	106269462	106269552	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-4.4874
chr4	144754499	144754589	protein_coding	Vps13d	exon	ENSMUSG00000020220	ProperStrand	59	chr7	148634705	148634785	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-4.0177
chr17	17345047	17345127	LINE	L1_Mus1	L1	chr17L1_Mus117344974	NonProperStrand	1	chr7	113399821	113399911	LINE	L1Md_T	L1	chr7L1Md_T113399183	NonProperStrand	1	1	-inf
chr4	30751493	30751583	LTR	MurERV4-int	ERVK	chr4MurERV4-int30751508	ProperStrand	1	chr14	24225587	24225667	protein_coding	Kcnma1	intron	ENSMUSG00000063142	NonProperStrand	104	1	-inf
chrX	100799273	100799311	non_coding	B230206F22Rik	.	ENSMUSG00000086370	ProperStrand	9	chr16	23110510	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	5	-19.7438
chr5	136364210	136364243	protein_coding	Hspb1	exon	ENSMUSG00000004951	ProperStrand	25	chr6	113197981	113198019	protein_coding	Mtmr14	intron	ENSMUSG00000030269	ProperStrand	15	2	-20.5501
chr14	94112570	94112586	protein_coding	Pcdh9	intron	ENSMUSG00000055421	NonProperStrand	9	chr7	52381972	52382012	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-10.5785
chr2	129998642	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr2	26494708	26494801	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	13	-8.2742
chr11	5425178	5425194	protein_coding	Xbp1	utr3	ENSMUSG00000020484	ProperStrand	16	chr4	131865888	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.1079
chr17	31749912	31749959	protein_coding	Cbs	utr3	ENSMUSG00000024039	ProperStrand	12	chr8	113796987	113797717	protein_coding	Rfwd3	exon	ENSMUSG00000033596	ProperStrand	71	3	-inf
chrX	131219176	131219193	lincRNA	B230119M05Rik	exon	ENSMUSG00000087024	ProperStrand	1	chr5	108336363	108336490	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-inf
chr4	59591733	59591752	LTR	RMER17A2	ERVK	chr4RMER17A259591623	ProperStrand	1	chr9	123082285	123082337	protein_coding	Cdcp1	utr3	ENSMUSG00000035498	ProperStrand	2	1	-inf
chr6	66580135	66580225	LINE	Lx3A	L1	chr6Lx3A66576373	ProperStrand	1	chr7	54443925	54444004	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-inf
chrX	71517834	71517905	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	chr17	35384120	35384195	snoRNA	ENSMUSG00000065273_SNORD83	.	ENSMUSG00000065273	ProperStrand	244	3	-9.3692
chr2	31872727	31872770	protein_coding	Nup214	exon	ENSMUSG00000001855	ProperStrand	62	chr17	25996060	25996076	protein_coding	Wdr90	exon	ENSMUSG00000073434	ProperStrand	91	1	-12.4111
chr6	117121583	117121600	protein_coding	Cxcl12	exon	ENSMUSG00000061353	NonProperStrand	6	chr1	162966813	162966838	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-10.9912
chr15	3230457	3230474	protein_coding	Sepp1	utr3	ENSMUSG00000064373	ProperStrand	3	chr10	23505171	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-12.0722
chr6	71865045	71865095	protein_coding	Polr1a	exon	ENSMUSG00000049553	ProperStrand	109	chr1	93342189	93345290	protein_coding	Per2	exon	ENSMUSG00000055866	ProperStrand	114	1	-10.8250
chr14	35505823	35505913	protein_coding	Wapal	exon	ENSMUSG00000041408	ProperStrand	93	chr12	88778643	88778723	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-5.6357
chrX	72214248	72214264	protein_coding-noncoding	Gab3	utr3	ENSMUSG00000032750	ProperStrand	420	chr11	30097815	30097840	protein_coding	Spnb2	utr5	ENSMUSG00000020315	ProperStrand	103	1	-8.3347
chr15	36538239	36538299	protein_coding	Pabpc1	utr5	ENSMUSG00000022283	ProperStrand	908	chr17	32453268	32453285	protein_coding	Akap8	exon	ENSMUSG00000024045	ProperStrand	339	1	-4.4914
chr13	73928167	73953638	protein_coding	Slc12a7	utr3	ENSMUSG00000017756	ProperStrand	80	chr15	79913288	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	4	-10.5398
chr7	97356478	97356498	protein_coding	Picalm	utr3	ENSMUSG00000039361	ProperStrand	23	chr3	19528533	19528550	protein_coding	1700064H15Rik	exon	ENSMUSG00000082766	NonProperStrand	78	1	-14.7208
chr13	49779664	49779803	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	chr16	43886828	43886929	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	4	-7.8835
chr2	69551494	69551511	protein_coding-noncoding	Fastkd1	utr3	ENSMUSG00000027086	NonProperStrand	1	chr11	120346593	120346688	protein_coding	Mrpl12	exon	ENSMUSG00000039640	ProperStrand	49	1	-inf
chr4	126802021	126802121	protein_coding	Gm12942	intron	ENSMUSG00000070737	ProperStrand	30	chr1	162967519	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.7879
chr2	32818885	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	NonProperStrand	5	chr18	35714144	35714256	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	NonProperStrand	47	1	-19.2340
chr6	147050225	147050257	protein_coding	Klhdc5	exon	ENSMUSG00000040102	ProperStrand	13	chr1	164640894	164640912	protein_coding	Prrc2c	exon	ENSMUSG00000040225	NonProperStrand	5	1	-21.0986
chr5	136259337	136260078	protein_coding	Mdh2	exon	ENSMUSG00000019179	ProperStrand	50	chr15	79908929	79908954	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-5.8301
chr10	127995460	127995488	protein_coding	Pa2g4	utr3	ENSMUSG00000025364	ProperStrand	72	chr16	23110913	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-1.7497
chr11	72257516	72257616	protein_coding	Mybbp1a	exon	ENSMUSG00000040463	ProperStrand	279	chrX	34622906	34622926	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	3	-2.7199
chr6	92474468	92474558	protein_coding	Prickle2	intron	ENSMUSG00000030020	ProperStrand	13	chr8	73419706	73419786	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-6.0818
chr16	22382999	22383099	protein_coding	Etv5	utr3	ENSMUSG00000013089	ProperStrand	88	chr11	97642952	97642973	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-3.3666
chr5	65049135	65049225	LTR	ORR1E	MaLR	chr5ORR1E65049024	ProperStrand	2	chr16	23110456	23110536	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-inf
chr19	8800082	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	chr3	123210852	123210981	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	22	-7.2805
chr8	114193730	114193830	protein_coding	Zfp1	exon	ENSMUSG00000055835	ProperStrand	11	chr17	24857729	24857790	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	7	-19.6368
chr8	131569829	131571509	protein_coding	Ccdc7	exon	ENSMUSG00000025808	ProperStrand	1	chr4	131908690	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-inf
chr9	121363417	121363517	protein_coding	Trak1	exon	ENSMUSG00000032536	ProperStrand	152	chr19	8963027	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	5	-5.8899
chr1	34332522	34332554	protein_coding	Dst	exon	ENSMUSG00000026131	ProperStrand	461	chr3	51486299	51486317	protein_coding	Mgst2	intron	ENSMUSG00000074604	ProperStrand	1	1	-inf
chr17	13112477	13112578	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	chr10	90581031	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	17	-3.4119
chr17	88085689	88088297	protein_coding	Msh2	exon	ENSMUSG00000024151	ProperStrand	124	chr9	15119711	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	11	-inf
chr13	9833552	9833670	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr17	35088956	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	11	-4.8638
chr15	81110991	81111009	SINE	ID4	ID	chr15ID481110956	ProperStrand	272	chr15	73418049	73418107	protein_coding	Slc45a4	exon	ENSMUSG00000079020	ProperStrand	127	1	-8.7812
chrX	71589885	71589903	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr5	73563222	73563238	protein_coding	Fryl	intron	ENSMUSG00000070733	ProperStrand	173	1	-8.0310
chr19	58193155	58193173	protein_coding	Atrnl1	intron	ENSMUSG00000054843	ProperStrand	22	chr14	76245448	76245494	protein_coding	Tpt1	exon	ENSMUSG00000060126	ProperStrand	236	1	-12.5986
chr7	13613042	13615533	protein_coding	Trim28	exon	ENSMUSG00000005566	ProperStrand	296	chr11	69483136	69483273	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	6	-4.4606
chr17	28033014	28033030	protein_coding	Uhrf1bp1	utr3	ENSMUSG00000039512	ProperStrand	79	chr12	101203820	101203837	protein_coding	Kcnk13	utr5	ENSMUSG00000045404	NonProperStrand	3	1	-21.1366
chr5	34894211	34894227	protein_coding	Sh3bp2	utr5	ENSMUSG00000054520	ProperStrand	43	chr6	125031521	125031587	protein_coding	Lpar5	exon	ENSMUSG00000067714	ProperStrand	6	2	-19.8805
chr10	87543172	87543218	SINE	ID_B1	B4	chr10ID_B187543092	ProperStrand	1	chr10	127097285	127097369	protein_coding	Stat6	utr3	ENSMUSG00000002147	ProperStrand	8	1	-inf
chr11	78086787	78086944	protein_coding	2610507B11Rik	exon	ENSMUSG00000010277	ProperStrand	246	chr1	9932564	9932625	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-4.9567
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr7	29136544	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	4	-2.6438
chr16	13847840	13854495	protein_coding	Pdxdc1	exon	ENSMUSG00000022680	ProperStrand	26	chr12	88778722	88778768	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-8.1714
chr17	4082091	4082172	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr15	77597977	77597993	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	1	-5.5027
chr4	86502129	86502146	protein_coding	Rps6	exon	ENSMUSG00000028495	ProperStrand	263	chr8	28370923	28370939	protein_coding	Eif4ebp1	exon	ENSMUSG00000031490	NonProperStrand	35	1	-11.4386
chr2	32485775	32485865	protein_coding	Ak1	exon	ENSMUSG00000026817	ProperStrand	33	chr4	131908293	131908721	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	6	-14.1798
chr6	4704210	4704244	protein_coding	Peg10	utr5	ENSMUSG00000092035	ProperStrand	102	chr15	34370546	34370613	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	4	-9.2659
chr8	73416226	73416242	protein_coding	Slc5a5	exon	ENSMUSG00000000792	ProperStrand	6	chr1	133744546	133744660	protein_coding	Slc41a1	utr3	ENSMUSG00000013275	ProperStrand	19	1	-19.0985
chr17	32280540	32280595	protein_coding	Notch3	exon	ENSMUSG00000038146	ProperStrand	181	chr19	8800447	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-1.6519
chr3	123210873	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	chr13	23392027	23392066	tRNA	tRNA97-ValCAC	.	1190615	ProperStrand	52	1	-2.3028
chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	chr5	54389949	54389965	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	1	-6.7567
chr11	117829136	117829238	protein_coding	Socs3	exon	ENSMUSG00000053113	ProperStrand	137	chr7	116663711	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	5	-7.1225
chr8	108228551	108228568	protein_coding	E130303B06Rik	exon	ENSMUSG00000013155	NonProperStrand	6	chr10	128135570	128135591	protein_coding	Cdk2	utr3	ENSMUSG00000025358	ProperStrand	19	1	-19.0985
chr19	39043385	39043475	protein_coding	Hells	utr3	ENSMUSG00000025001	ProperStrand	23	chr9	22177664	22177727	protein_coding	Anln	exon	ENSMUSG00000036777	ProperStrand	133	1	-13.6560
chr10	42668421	42668440	protein_coding	Scml4	intron	ENSMUSG00000044770	NonProperStrand	2	chr9	15119648	15119969	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-9.8289
chr11	75517562	75517619	protein_coding	Crk	utr3	ENSMUSG00000017776	ProperStrand	31	chr4	129192401	129192501	protein_coding	Marcksl1	utr3	ENSMUSG00000047945	ProperStrand	52	1	-14.9345
chr1	63610748	63639341	protein_coding	Adam23	utr3	ENSMUSG00000025964	ProperStrand	59	chr1	162965532	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-8.3158
chr17	13184995	13185015	protein_coding	Wtap	utr5	ENSMUSG00000060475	ProperStrand	119	chr11	68886975	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	2	-5.0052
chr4	117557120	117557220	protein_coding	Atp6v0b	utr3	ENSMUSG00000033379	ProperStrand	13	chr5	130295513	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-8.3148
chr8	88585178	88585218	protein_coding	Phkb	utr3	ENSMUSG00000036879	ProperStrand	25	chr4	116827121	116827179	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	2	-14.0085
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr16	23110864	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	25	-1.4318
chr17	45706244	45706426	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr10	23506278	23506346	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	2	-2.0872
chr5	74489214	74489326	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr3	94894546	94894580	snoRNA	ENSMUSG00000064952_SNORD62	.	ENSMUSG00000064952	ProperStrand	75	2	-8.5253
chr6	129377504	129377520	protein_coding	Clec1a	utr3	ENSMUSG00000033082	ProperStrand	11	chr11	6428143	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-6.4917
chr2	153092988	153093084	protein_coding	Pofut1	utr3	ENSMUSG00000046020	ProperStrand	17	chr17	35088957	35088985	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	2	-13.4371
chr5	54389949	54389965	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	chr15	77356785	77356801	protein_coding	Apol7c	exon	ENSMUSG00000044309	ProperStrand	197	1	-8.4023
chr18	38062784	38062801	protein_coding	Diap1	exon	ENSMUSG00000024456	ProperStrand	77	chr2	26493389	26493489	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-3.2836
chr2	26493442	26493518	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr16	14472289	14472308	protein_coding	Abcc1	intron	ENSMUSG00000023088	ProperStrand	35	1	-7.2666
chr11	116153837	116155314	protein_coding	Exoc7	exon	ENSMUSG00000020792	ProperStrand	24	chr14	33005156	33005236	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-5.7700
chr15	10417841	10417889	protein_coding	Rad1	intron	ENSMUSG00000022248	ProperStrand	3	chr13	96100555	96100645	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	1	-14.4395
chr11	101466286	101466351	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	chr9	120037897	120037997	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-0.9798
chr2	90235294	90235346	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	88248607	88248662	snoRNA	ENSMUSG00000064696_SNORD20	.	ENSMUSG00000064696	ProperStrand	89	4	-12.2437
chr7	119253774	119253792	protein_coding	Usp47	utr3	ENSMUSG00000059263	ProperStrand	40	chr7	29136545	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	4	-10.6489
chr9	53378642	53378732	protein_coding	Npat	exon	ENSMUSG00000033054	ProperStrand	20	chr16	23111386	23111466	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.0472
chr8	107824309	107824399	protein_coding	E2f4	exon	ENSMUSG00000014859	ProperStrand	32	chr2	22444734	22444817	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-9.0395
chr2	33500004	33500020	antisense	C130021I20Rik	.	ENSMUSG00000052951	ProperStrand	2	chr4	46485152	46485212	protein_coding	Anp32b	utr3	ENSMUSG00000028333	ProperStrand	229	1	-18.1753
chr16	5101595	5102443	protein_coding	Ppl	exon	ENSMUSG00000039457	ProperStrand	37	chr4	131866172	131866262	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-4.5804
chr6	125114987	125115063	protein_coding-noncoding	Gapdh	utr3	ENSMUSG00000057666	ProperStrand	1	chr16	74119320	74119337	protein_coding	Robo2	intron	ENSMUSG00000052516	NonProperStrand	28	1	-inf
chr9	20722641	20722725	protein_coding	Dnmt1	exon	ENSMUSG00000004099	ProperStrand	91	chr11	48615293	48615326	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	1	-8.9621
chr5	114297550	114298544	protein_coding	Coro1c	exon	ENSMUSG00000004530	ProperStrand	44	chr4	131908322	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-3.4538
chr6	97497429	97497501	snoRNA	ENSMUSG00000064724_SNORA63	.	ENSMUSG00000064724	ProperStrand	35	chr19	8963136	8963181	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.2191
chr2	32818841	32818941	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	chr11	116533823	116533893	snoRNA	ENSMUSG00000065640_Snord1c	.	ENSMUSG00000065640	ProperStrand	373	1	-2.1243
chr15	81305665	81305691	protein_coding	Rbx1	utr3	ENSMUSG00000022400	ProperStrand	78	chr8	122087875	122087891	protein_coding	Hsdl1	utr3	ENSMUSG00000034189	ProperStrand	11	1	-16.2200
chr19	25484358	25484374	protein_coding	Kank1	exon	ENSMUSG00000032702	ProperStrand	218	chr2	146125209	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	1	-8.4827
chr16	23111413	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	chr9	15116994	15117014	snoRNA	ENSMUSG00000077614_SNORA40	.	ENSMUSG00000077614	ProperStrand	54	3	-4.2022
chr2	28368857	28368876	protein_coding	Ralgds	utr5	ENSMUSG00000026821	NonProperStrand	60	chr1	66741087	66741103	protein_coding	Unc80	exon	ENSMUSG00000055567	NonProperStrand	212	1	-10.7817
chr3	32617381	32617514	protein_coding	Actl6a	exon	ENSMUSG00000027671	ProperStrand	31	chr3	108357255	108357358	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	2	-9.5230
chr2	155922446	155922536	protein_coding	Rbm12	exon	ENSMUSG00000089824	ProperStrand	26	chr10	107800763	107800843	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	1	-9.7559
chr17	39390817	39390833	LTR	MMERVK10C-int	ERVK	chr17MMERVK10C-int39390398	NonProperStrand	11	chrX	99736532	99736553	protein_coding	Phka1	exon	ENSMUSG00000034055	ProperStrand	7	1	-inf
chr10	127428422	127428438	protein_coding	Hsd17b6	exon	ENSMUSG00000025396	NonProperStrand	68	chr4	131908357	131908453	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	5	-7.2566
chr11	3156700	3162496	protein_coding	Drg1	exon	ENSMUSG00000020457	ProperStrand	19	chr4	155013774	155013941	protein_coding	Cdk11b	exon	ENSMUSG00000029062	ProperStrand	92	1	-14.7974
chr12	77381689	77383914	protein_coding	Mthfd1	exon	ENSMUSG00000021048	ProperStrand	71	chr1	162968213	162968289	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-6.4831
chr17	28022869	28022933	protein_coding	Uhrf1bp1	exon	ENSMUSG00000039512	ProperStrand	79	chr10	23505168	23505258	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-1.7818
chr7	80572129	80572146	protein_coding	Chd2	utr3	ENSMUSG00000078671	NonProperStrand	4	chr5	108336363	108336458	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-16.9556
chr4	63389602	63389618	protein_coding	Tnfsf15	utr3	ENSMUSG00000050395	NonProperStrand	121	chr7	116663711	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.4014
chr11	8351470	8455887	protein_coding	Tns3	intron	ENSMUSG00000020422	ProperStrand	81	chr4	131908687	131908746	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	6	-7.3122
chr17	47731971	47732027	protein_coding	Ccnd3	intron	ENSMUSG00000034165	ProperStrand	58	chr17	24857796	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.3538
chr8	73419673	73419779	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	chr1	187066846	187066917	snoRNA	ENSMUSG00000077571_Snora36b	.	ENSMUSG00000077571	ProperStrand	244	2	-1.8740
chr2	69708567	69708748	protein_coding	Ssb	exon	ENSMUSG00000068882	ProperStrand	37	chrX	34622906	34622942	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-4.0674
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	31505157	31505257	protein_coding	Ppm1g	utr3	ENSMUSG00000029147	ProperStrand	69	1	-4.1968
chr17	37143096	37146440	protein_coding	Zfp57	exon	ENSMUSG00000036036	ProperStrand	39	chr2	26493366	26493390	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-4.5588
chr17	45704139	45704156	protein_coding	Slc35b2	exon	ENSMUSG00000037089	ProperStrand	55	chr12	58331566	58331582	protein_coding	Mipol1	utr5	ENSMUSG00000047022	ProperStrand	40	1	-14.3058
chr16	23111374	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	chr11	62590602	62590631	snoRNA	ENSMUSG00000064692_SNORA67	.	ENSMUSG00000064692	ProperStrand	185	3	-0.8953
chr13	55665598	55665615	protein_coding	Fam193b	intron	ENSMUSG00000021495	NonProperStrand	3	chr1	91573787	91573803	protein_coding	Agap1	intron	ENSMUSG00000055013	NonProperStrand	32	1	-23.9570
chr12	11098801	11098817	protein_coding	Kcns3	exon	ENSMUSG00000043673	NonProperStrand	7	chr4	131865856	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.7768
chr18	61857338	61857423	protein_coding	Pcyox1l	exon	ENSMUSG00000024579	ProperStrand	15	chr16	23110981	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-5.9163
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr8	46109045	46109105	protein_coding	Fat1	exon	ENSMUSG00000070047	ProperStrand	306	1	-5.1048
chr15	8394342	8394400	protein_coding	Nipbl	utr5	ENSMUSG00000022141	ProperStrand	45	chr9	15119719	15119969	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-5.4132
chr17	25022367	25022428	protein_coding	Nubp2	exon	ENSMUSG00000039183	ProperStrand	8	chr1	162965550	162965584	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-7.2483
chr11	29421332	29421349	SINE	B3A	B2	chr11B3A29421267	NonProperStrand	21	chr8	72868227	72868255	protein_coding	Upf1	exon	ENSMUSG00000058301	ProperStrand	90	1	-14.6300
chr2	25563070	25563086	antisense	A230005M16Rik	.	ENSMUSG00000087612	ProperStrand	103	chr7	13516166	13516186	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	1	-7.5876
chr5	70661293	70661373	LTR	ETnERV3-int	ERVK	chr5ETnERV3-int70660177	ProperStrand	1	chr5	91002255	91002345	protein_coding	5830473C10Rik	intron	ENSMUSG00000070690	ProperStrand	1	1	-inf
chr10	80860137	80860717	protein_coding	Nfic	utr3	ENSMUSG00000055053	ProperStrand	69	chr16	23110455	23110553	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-3.9791
chr11	69692663	69692680	protein_coding	Kctd11	utr3	ENSMUSG00000046731	ProperStrand	1	chr6	71543915	71543960	protein_coding	Kdm3a	exon	ENSMUSG00000053470	ProperStrand	41	1	-inf
chr7	51861585	51861655	protein_coding	Myh14	exon	ENSMUSG00000030739	ProperStrand	29	chr17	30645631	30645662	protein_coding	Btbd9	intron	ENSMUSG00000062202	NonProperStrand	9	1	-18.5214
chr5	61330780	61330796	LTR	ORR1D1	MaLR	chr5ORR1D161330603	ProperStrand	1	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-inf
chr13	107765486	107765502	protein_coding	Kif2a	exon	ENSMUSG00000021693	ProperStrand	32	chr4	56910496	56910617	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-7.3577
chr10	23506282	23506347	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	chr1	9932550	9932621	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-1.7867
chr7	134461554	134461587	protein_coding	Itgal	intron	ENSMUSG00000030830	ProperStrand	38	chr2	130103751	130103798	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-9.3899
chr7	105224084	105224101	protein_coding	Myo7a	intron	ENSMUSG00000030761	ProperStrand	14	chr11	69483172	69483262	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	8	-inf
chr1	75349294	75349386	LTR	MTC	MaLR	chr1MTC75349180	ProperStrand	2	chr19	8799830	8799886	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-12.3459
chr17	24343586	24343602	protein_coding	Ntn3	exon	ENSMUSG00000079662	ProperStrand	237	chr5	121655016	121655094	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-1.4293
chr15	81739943	81740010	protein_coding	Aco2	exon	ENSMUSG00000022477	ProperStrand	237	chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	1	-6.1133
chr10	80641919	80641944	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr14	31826494	31826510	protein_coding	Gnl3	exon	ENSMUSG00000042354	NonProperStrand	59	1	-6.1321
chr10	20080843	20080859	protein_coding	Fam54a	utr3	ENSMUSG00000019992	ProperStrand	232	chr12	4236370	4236412	protein_coding	2410017P09Rik	exon	ENSMUSG00000073240	ProperStrand	2	1	-18.0934
chr1	165176238	165176254	protein_coding	Prrx1	utr3	ENSMUSG00000026586	ProperStrand	19	chr7	29136525	29136575	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.4734
chr2	77024926	77024945	protein_coding	Sestd1	utr3	ENSMUSG00000042272	NonProperStrand	10	chr9	120038552	120038609	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-6.5201
chr8	62040661	62040677	LINE	L1_Mur3	L1	chr8L1_Mur362040154	ProperStrand	1	chr8	73419679	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-inf
chr5	108336376	108336495	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	chr14	33005036	33005138	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	15	-0.9649
chr6	115568865	115568992	protein_coding	Raf1	utr3	ENSMUSG00000000441	ProperStrand	30	chr15	79913288	79913319	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.9112
chr4	34498225	34498241	protein_coding	Akirin2	utr5	ENSMUSG00000028291	NonProperStrand	2	chr1	102076757	102076790	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	1	-16.8683
chr11	79908963	79908979	protein_coding	Atad5	exon	ENSMUSG00000017550	ProperStrand	5	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-12.3542
chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	chr7	149170855	149171339	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	1	-7.7003
chr10	57976675	57976702	protein_coding	Ccdc138	intron	ENSMUSG00000038010	ProperStrand	9	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-5.3337
chr11	107353436	107354757	protein_coding	Psmd12	exon	ENSMUSG00000020720	ProperStrand	31	chr9	120037936	120038026	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	2	-9.7795
chr12	11234766	11234856	SINE	B1_Mm	Alu	chr12B1_Mm11234772	ProperStrand	1	chr12	11235015	11235095	Simple_repeat	(TGGA)n	Simple_repeat	chr12(TGGA)n11235027	NonProperStrand	1	1	-inf
chr4	88365657	88365692	protein_coding	Klhl9	utr3	ENSMUSG00000070923	ProperStrand	7	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-13.4020
chr7	133700299	133702445	protein_coding	Eif3c	exon	ENSMUSG00000030738	ProperStrand	92	chr4	131908232	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-2.8638
chr7	4026330	4026397	processed_transcript	9430041J12Rik	.	ENSMUSG00000086155	ProperStrand	1	chr10	80809668	80809684	protein_coding	Hmg20b	exon	ENSMUSG00000020232	ProperStrand	157	1	-inf
chr5	112730519	112730547	protein_coding	Tpst2	intron	ENSMUSG00000029344	ProperStrand	34	chr11	69483136	69483229	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-8.6886
chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr2	22444578	22444946	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	5	-1.4668
chr2	90235298	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	14521224	14521241	protein_coding	Piwil4	intron	ENSMUSG00000036912	ProperStrand	24	1	-6.2570
chr3	141904253	141904281	protein_coding	Pdlim5	utr3	ENSMUSG00000028273	ProperStrand	17	chr11	69483183	69483273	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-11.5478
chr2	129998645	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr11	99885311	99885327	protein_coding	Krt33b	exon	ENSMUSG00000057723	NonProperStrand	352	2	-7.6774
chr7	105034976	105037487	protein_coding	Pak1	exon	ENSMUSG00000030774	ProperStrand	13	chr18	63109676	63109692	protein_coding	Apcdd1	exon	ENSMUSG00000071847	NonProperStrand	254	1	-13.5368
chr12	4886210	4886310	protein_coding	Ubxn2a	utr3	ENSMUSG00000020634	ProperStrand	8	chr4	131908810	131908872	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.7736
chr7	149558067	149558084	protein_coding	6330512M04Rik	utr5	ENSMUSG00000045777	NonProperStrand	17	chr11	69481390	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.6167
chr18	18189409	18189425	LINE	Lx2	L1	chr18Lx218189230	NonProperStrand	3	chr16	90386834	90386852	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	1	-19.4396
chr7	146684406	146684424	protein_coding	Inpp5a	intron	ENSMUSG00000025477	ProperStrand	166	chr8	13416894	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-4.4754
chr9	108239061	108239124	protein_coding	Rhoa	exon	ENSMUSG00000007815	ProperStrand	45	chr12	55797769	55797833	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	8	-21.4849
chr11	74712741	74712783	protein_coding	Tsr1	exon	ENSMUSG00000038335	ProperStrand	48	chr4	131908356	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.7522
chr19	47929770	47929786	protein_coding	Wdr96	intron	ENSMUSG00000044948	ProperStrand	9	chr4	116862558	116862663	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	3	-19.4369
chr17	39979942	39979982	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr13	9833550	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	3	-1.3057
chr1	174122684	174122745	protein_coding	Dcaf8	exon	ENSMUSG00000026554	ProperStrand	35	chr4	131865394	131865459	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	7	-inf
chr2	90235295	90235325	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	129364056	129364181	protein_coding	2010110P09Rik	exon	ENSMUSG00000030865	NonProperStrand	26	1	-6.0972
chr6	85895881	85895897	protein_coding	Dusp11	utr3	ENSMUSG00000030002	ProperStrand	37	chr18	21054478	21054494	protein_coding	Trappc8	exon	ENSMUSG00000033382	ProperStrand	43	1	-14.9648
chr13	93906138	93906156	protein_coding	Cmya5	intron	ENSMUSG00000047419	ProperStrand	3	chr2	130102043	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-11.6725
chr3	138123420	138125387	protein_coding	Metap1	exon	ENSMUSG00000005813	ProperStrand	9	chr11	69483241	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	4	-18.8049
chrX	99382697	99383166	protein_coding	Rps4x	exon	ENSMUSG00000031320	ProperStrand	139	chr8	109708743	109708821	protein_coding	Cyb5b	utr3	ENSMUSG00000031924	ProperStrand	39	1	-12.4956
chr5	74489232	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr3	88497852	88497980	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	9	-11.6074
chr2	79132657	79132674	protein_coding-noncoding	Itga4	utr5	ENSMUSG00000027009	NonProperStrand	118	chr15	98604924	98606960	protein_coding	Wnt10b	exon	ENSMUSG00000022996	NonProperStrand	189	1	-9.6544
chr17	6138911	6138928	protein_coding	Tulp4	exon	ENSMUSG00000034377	ProperStrand	164	chr7	119196881	119196929	protein_coding	Usp47	exon	ENSMUSG00000059263	ProperStrand	40	1	-12.1139
chr2	90235285	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	65127126	65127142	protein_coding	Cilp	exon	ENSMUSG00000042254	ProperStrand	212	1	-2.1903
chr4	100779923	100779961	protein_coding	Raver2	exon	ENSMUSG00000035275	ProperStrand	16	chr5	115939504	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	6	-20.3043
chr11	120833013	120833740	protein_coding	Csnk1d	exon	ENSMUSG00000025162	ProperStrand	37	chr4	41150095	41150158	snoRNA	ENSMUSG00000089265_SNORD121A	.	ENSMUSG00000089265	ProperStrand	370	8	-19.4267
chr2	31924012	31924028	protein_coding	Fam78a	utr3	ENSMUSG00000050592	NonProperStrand	340	chr1	162967734	162967780	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	1	-6.7904
chr15	75711459	75711516	LTR	RLTR20B3	ERVK	chr15RLTR20B375711193	NonProperStrand	2	chr8	93477883	93477968	protein_coding	Chd9	intron	ENSMUSG00000056608	ProperStrand	35	1	-inf
chr2	90235297	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr14	76956323	76956339	protein_coding	Serp2	utr5	ENSMUSG00000052584	NonProperStrand	41	2	-8.5596
chr3	96218474	96218574	misc_RNA	Telomerase-vert	.	ENSMUSG00000064796	ProperStrand	443	chr1	162968477	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-2.3557
chr4	131908358	131908509	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr9	15119317	15119420	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	2	-0.8518
chr4	53873613	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	chr4	46508071	46508134	snoRNA	ENSMUSG00000064410_SNORA36	.	ENSMUSG00000064410	ProperStrand	133	1	-7.4564
chr4	140876459	140881236	protein_coding	Epha2	exon	ENSMUSG00000006445	ProperStrand	148	chr4	131908232	131908341	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-0.8925
chr4	138856240	138856320	protein_coding	Pqlc2	exon	ENSMUSG00000028744	ProperStrand	5	chr4	131908689	131908779	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.7672
chr18	63908609	63908625	protein_coding	Wdr7	intron	ENSMUSG00000040560	NonProperStrand	180	chr15	79908930	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-3.3892
chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	chr19	8799581	8799626	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-2.5394
chr11	103683388	103683488	protein_coding	Nsf	utr3	ENSMUSG00000034187	ProperStrand	20	chrX	34622906	34622943	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-5.2611
chr17	45705193	45705808	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr17	13112457	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	24	-21.2608
chr5	115940325	115940383	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	chr9	15119644	15119742	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	7	-2.6163
chr11	101371350	101374060	protein_coding	Brca1	exon	ENSMUSG00000017146	ProperStrand	51	chr5	130300470	130300550	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.7919
chr4	43505743	43505823	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr18	75553720	75553810	protein_coding	Smad7	exon	ENSMUSG00000025880	ProperStrand	83	8	-19.4217
chr3	19957903	19957920	protein_coding	Hltf	utr5	ENSMUSG00000002428	ProperStrand	24	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-7.0148
chr11	101163168	101163464	protein_coding	Becn1	utr5	ENSMUSG00000035086	ProperStrand	8	chr3	89750435	89750451	protein_coding	Atp8b2	exon	ENSMUSG00000060671	ProperStrand	140	1	-15.7366
chr7	120657374	120657390	protein_coding	Far1	utr5	ENSMUSG00000030759	ProperStrand	72	chr17	33961254	33961390	protein_coding	Rps28	exon	ENSMUSG00000067288	ProperStrand	52	1	-13.2345
chr3	69551313	69551359	protein_coding	Nmd3	intron	ENSMUSG00000027787	ProperStrand	18	chr7	148634803	148634836	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-6.3384
chr3	102935765	102935811	protein_coding	Dennd2c	exon	ENSMUSG00000007379	ProperStrand	19	chr2	129026277	129029806	protein_coding	Slc20a1	exon	ENSMUSG00000027397	ProperStrand	81	3	-21.3277
chr14	32428640	32428656	protein_coding	Hacl1	exon	ENSMUSG00000021884	ProperStrand	2	chr2	26493424	26493484	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-11.0703
chr9	122993029	122993057	protein_coding-noncoding	Zdhhc3	utr3	ENSMUSG00000025786	ProperStrand	9	chr2	130101985	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-9.1946
chr11	62416951	62416987	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	NonProperStrand	3	chr10	110918546	110918646	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	NonProperStrand	10	2	-inf
chr7	20232180	20241109	protein_coding	Clptm1	exon	ENSMUSG00000002981	ProperStrand	109	chr15	76541224	76541240	protein_coding	Lrrc14	utr5	ENSMUSG00000033728	ProperStrand	52	1	-12.4023
chr17	95160908	95218243	protein_coding	2610044O15Rik	exon	ENSMUSG00000066057	NonProperStrand	70	chr10	23505152	23505279	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-3.2975
chr15	74417607	74417669	protein_coding	Bai1	exon	ENSMUSG00000034730	ProperStrand	22	chr16	23110884	23110974	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.8207
chr11	87172190	87172206	protein_coding	Ppm1e	exon	ENSMUSG00000046442	ProperStrand	112	chr19	8799022	8799083	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-4.6217
chr18	10052128	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr8	113984800	113986150	protein_coding	Wdr59	exon	ENSMUSG00000031959	ProperStrand	18	1	-11.2407
chr17	84236811	84236828	protein_coding	Haao	intron	ENSMUSG00000000673	NonProperStrand	10	chr6	71832550	71832603	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-9.2340
chr19	5105033	5105145	protein_coding	Rab1b	intron	ENSMUSG00000024870	ProperStrand	133	chr4	131908689	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-0.8439
chr8	119119040	119147724	protein_coding	Cdyl2	exon	ENSMUSG00000031758	ProperStrand	35	chr5	114662732	114663382	protein_coding	Acacb	exon	ENSMUSG00000042010	ProperStrand	7	1	-19.0433
chr16	57136900	57138212	protein_coding	Tomm70a	exon	ENSMUSG00000022752	ProperStrand	82	chr18	35716699	35716779	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.6739
chr12	112174494	112174510	protein_coding	Tecpr2	exon	ENSMUSG00000021275	NonProperStrand	2	chr12	55797772	55797862	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	1	-15.1668
chr9	112088269	112088423	protein_coding-noncoding	Arpp21	utr3	ENSMUSG00000032503	ProperStrand	28	chr17	31990510	31990610	protein_coding	Sik1	intron	ENSMUSG00000024042	ProperStrand	55	1	-15.0304
chr5	74489202	74489295	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr11	106362657	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	2	-1.4154
chr7	148634805	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	chr6	125071779	125071873	snoRNA	ENSMUSG00000088208_SCARNA11	.	ENSMUSG00000088208	ProperStrand	113	1	-2.8315
chrX	12681830	12681920	protein_coding	Usp9x	exon	ENSMUSG00000031010	ProperStrand	174	chr4	56910508	56910588	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-4.0525
chr9	103255512	103255555	protein_coding	Cdv3	utr3	ENSMUSG00000032803	ProperStrand	68	chr5	108336367	108336457	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-4.6400
chr18	75160186	75160884	protein_coding	Rpl17	utr5	ENSMUSG00000062328	ProperStrand	90	chr7	116663633	116663710	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.8450
chr6	86731276	86731292	protein_coding	Anxa4	intron	ENSMUSG00000029994	ProperStrand	47	chr2	26083924	26092565	protein_coding	Qsox2	exon	ENSMUSG00000036327	ProperStrand	24	1	-15.6775
chr2	156846500	156846600	protein_coding	9830001H06Rik	exon	ENSMUSG00000055485	ProperStrand	26	chr1	162968239	162968289	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	2	-13.5498
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr11	106362556	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	2	-5.0226
chr9	3696591	3696609	protein_coding	Gucy1a2	intron	ENSMUSG00000041624	ProperStrand	2	chr15	57978221	57978297	snoRNA	ENSMUSG00000080461_SNORA11	.	ENSMUSG00000080461	ProperStrand	171	1	-18.3271
chr1	182924861	182924879	protein_coding	Ephx1	exon	ENSMUSG00000038776	ProperStrand	26	chr19	8798484	8798550	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-6.8655
chr6	65759093	65759121	protein_coding	Prdm5	intron	ENSMUSG00000029913	ProperStrand	50	chr2	130103447	130103500	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-8.4285
chr4	75094306	75094322	LINE	Lx9	L1	chr4Lx975094037	ProperStrand	41	chr3	68889050	68889144	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-3.9623
chr1	162967489	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	chr6	71832548	71832692	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	21	-4.1587
chr12	112661567	112661586	protein_coding	1200009I06Rik	intron	ENSMUSG00000021280	NonProperStrand	15	chr2	92440278	92440296	protein_coding	Chst1	utr5	ENSMUSG00000027221	ProperStrand	17	1	-19.0158
chr11	55393217	55393307	protein_coding	Glra1	intron	ENSMUSG00000000263	NonProperStrand	1	chr4	48460538	48460628	protein_coding	Tex10	intron	ENSMUSG00000028345	ProperStrand	9	1	-inf
chr5	124897273	124897315	protein_coding	Setd8	exon	ENSMUSG00000049327	ProperStrand	71	chr7	117166748	117166859	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	6	-inf
chr4	126703409	126704029	protein_coding	Sfpq	exon	ENSMUSG00000028820	ProperStrand	340	chr4	122970435	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-4.0406
chr2	121079385	121079401	protein_coding	Trp53bp1	exon	ENSMUSG00000043909	ProperStrand	45	chr17	35088971	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-6.4359
chr13	68759738	68764669	protein_coding	Adcy2	exon	ENSMUSG00000021536	ProperStrand	237	chr16	56035872	56035919	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	1	-6.2173
chr11	97642952	97643005	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	chr13	23391990	23392025	tRNA	tRNA97-ValCAC	.	1337378	ProperStrand	52	1	-2.7191
chr7	31741012	31741183	protein_coding	Usf2	exon	ENSMUSG00000058239	ProperStrand	8	chr14	33005038	33005087	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	2	-12.9947
chr3	121134464	121134504	protein_coding	Cnn3	intron	ENSMUSG00000053931	ProperStrand	77	chr19	8799388	8799431	snoRNA	ENSMUSG00000065280_SNORD28	.	ENSMUSG00000065280	ProperStrand	269	1	-9.8046
chr12	16977897	16978037	protein_coding	Rock2	exon	ENSMUSG00000020580	ProperStrand	27	chr14	29842355	29842371	protein_coding	Cacna2d3	intron	ENSMUSG00000021991	ProperStrand	21	2	-20.9087
chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	chr17	29414856	29419010	protein_coding	BC004004	utr5	ENSMUSG00000052712	ProperStrand	5	1	-14.6051
chr5	66006584	66006672	protein_coding	Pds5a	exon	ENSMUSG00000029202	ProperStrand	62	chr7	150717299	150717349	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-5.4427
chr9	106092075	106092175	protein_coding	Wdr82	utr3	ENSMUSG00000020257	ProperStrand	34	chr10	110918624	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-4.5188
chr9	37454023	37454113	protein_coding	Siae	utr3	ENSMUSG00000001942	ProperStrand	5	chr17	35299511	35299591	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-9.8702
chr4	140121137	140121153	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	chr17	35089181	35089234	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	2	-6.5877
chr3	89009743	89009759	protein_coding	Gba	exon	ENSMUSG00000028048	NonProperStrand	88	chr11	6428088	6428154	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.5174
chr2	129998650	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr9	63066908	63066926	protein_coding	Map2k5	intron	ENSMUSG00000058444	NonProperStrand	79	1	-7.5603
chr9	78023111	78023212	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr10	5990356	6063978	protein_coding	Akap12	utr3	ENSMUSG00000038587	ProperStrand	1008	10	-15.8186
chr19	46139076	46139187	protein_coding	Pprc1	exon	ENSMUSG00000055491	ProperStrand	143	chr15	79913288	79913310	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	7	-15.2350
chr3	151973476	151973502	protein_coding	Fam73a	intron	ENSMUSG00000054942	ProperStrand	34	chr5	74489569	74489669	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	8	-19.1734
chr7	148798359	148798459	protein_coding	Ap2a2	intron	ENSMUSG00000002957	ProperStrand	76	chr11	68887042	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-3.7009
chr9	84523369	84523385	LTR	MT2A	ERVL	chr9MT2A84522996	ProperStrand	8	chr1	127491938	127491955	protein_coding	Slc35f5	utr3	ENSMUSG00000026342	ProperStrand	70	1	-17.0617
chr7	30783227	30798872	protein_coding	Zfp568	exon	ENSMUSG00000074221	ProperStrand	110	chr11	97642952	97643023	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.5051
chr17	25292423	25293776	protein_coding	Clcn7	exon	ENSMUSG00000036636	ProperStrand	94	chr4	139020471	139020545	protein_coding	Ubr4	exon	ENSMUSG00000066036	ProperStrand	304	1	-9.1609
chr3	60414901	60414919	protein_coding	Mbnl1	intron	ENSMUSG00000027763	ProperStrand	9	chr5	121655016	121655082	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-7.5103
chr11	97574722	97574794	protein_coding	Psmb3	utr3	ENSMUSG00000069744	ProperStrand	26	chr10	23506292	23506312	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	2	-13.7434
chr5	118563622	118563641	protein_coding	Fbxw8	exon	ENSMUSG00000032867	ProperStrand	61	chrX	136248404	136248424	pseudogene	Gm15013	.	ENSMUSG00000080740	ProperStrand	1	1	-inf
chr17	37140224	37140324	protein_coding	Zfp57	utr5	ENSMUSG00000036036	ProperStrand	39	chr19	8799830	8799898	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-5.7886
chr12	81735376	81735412	protein_coding	Erh	utr3	ENSMUSG00000021131	ProperStrand	20	chr10	80641721	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	2	-15.4707
chr11	69481332	69481479	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	18	-2.4431
chr7	148277797	148277860	protein_coding	Sigirr	exon	ENSMUSG00000025494	ProperStrand	30	chr2	127422595	127422625	protein_coding	Mrps5	intron	ENSMUSG00000027374	ProperStrand	84	1	-14.0476
chr11	106091772	106091836	protein_coding	Ddx42	intron	ENSMUSG00000020705	ProperStrand	26	chr2	181316563	181316579	protein_coding	Uckl1	exon	ENSMUSG00000089917	ProperStrand	142	1	-13.2773
chr15	102301123	102312476	protein_coding	Pcbp2	intron	ENSMUSG00000056851	ProperStrand	164	chr17	24857717	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	5	-5.5808
chr10	116792997	116793087	protein_coding	Cpsf6	exon	ENSMUSG00000055531	ProperStrand	86	chr7	117189947	117190027	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.6904
chr1	133141328	133141345	protein_coding	Rassf5	exon	ENSMUSG00000026430	ProperStrand	73	chr4	133163311	133163422	protein_coding	Zdhhc18	utr3	ENSMUSG00000037553	ProperStrand	51	1	-13.2483
chr7	105762795	105762895	protein_coding	2210018M11Rik	intron	ENSMUSG00000035401	ProperStrand	24	chr1	135280279	135280297	protein_coding	Sox13	exon	ENSMUSG00000070643	ProperStrand	6	3	-19.3700
chr5	143667140	143667276	protein_coding	Actb	exon	ENSMUSG00000029580	ProperStrand	446	chr11	97642949	97643016	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	5	-1.8730
chr2	181083993	181084181	protein_coding	Rtel1	exon	ENSMUSG00000038685	ProperStrand	22	chr11	69483182	69483272	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.2846
chr12	27874148	27874164	LTR	ORR1E	MaLR	chr12ORR1E27874117	NonProperStrand	27	chr13	60863336	60863398	protein_coding	Dapk1	utr3	ENSMUSG00000021559	ProperStrand	109	1	-13.7304
chr17	59135251	59135267	LTR	ORR1A2	MaLR	chr17ORR1A259135069	NonProperStrand	12	chr7	141372868	141372885	protein_coding	Adam12	intron	ENSMUSG00000054555	ProperStrand	18	1	-18.4539
chr12	82825392	82825482	protein_coding	Map3k9	exon	ENSMUSG00000042724	ProperStrand	92	chr4	122968584	122968664	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-5.4423
chr4	131866238	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	chr6	97112905	97112941	snoRNA	ENSMUSG00000065728_SNORA36	.	ENSMUSG00000065728	ProperStrand	158	1	-1.9772
chr13	47201411	47201433	protein_coding	Dek	intron	ENSMUSG00000021377	NonProperStrand	7	chr11	72224882	72224960	protein_coding	Smtnl2	exon	ENSMUSG00000045667	ProperStrand	30	1	-20.3420
chr11	100232575	100232675	protein_coding	Jup	utr3	ENSMUSG00000001552	ProperStrand	123	chr2	166890803	166890836	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	2	-14.1830
chr2	154691667	154692684	protein_coding	Raly	utr3	ENSMUSG00000027593	ProperStrand	116	chr19	8963031	8963121	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-2.4214
chr10	60659881	60659981	protein_coding	Adamts14	utr3	ENSMUSG00000059901	ProperStrand	17	chr4	131865939	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.9909
chr2	29873035	29873052	protein_coding	Spna2	intron	ENSMUSG00000057738	NonProperStrand	6	chr3	123210883	123210911	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-6.4760
chr15	63969559	63969575	protein_coding	Asap1	exon	ENSMUSG00000022377	NonProperStrand	47	chrX	34622993	34623037	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-3.6184
chr12	110888915	110888948	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr9	56266647	56266665	protein_coding	Hmg20a	utr5	ENSMUSG00000032329	ProperStrand	87	1	-7.9237
chr16	34357473	34360910	protein_coding	Kalrn	exon	ENSMUSG00000061751	NonProperStrand	52	chr6	125051514	125051538	protein_coding	Chd4	exon	ENSMUSG00000063870	ProperStrand	303	2	-16.2814
chr2	166890780	166890836	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	chr1	162965981	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-2.3061
chr9	56095347	56095366	protein_coding	C230081A13Rik	intron	ENSMUSG00000074305	NonProperStrand	5	chr9	15119712	15119766	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-7.5411
chr11	16668677	16668693	protein_coding	Egfr	intron	ENSMUSG00000020122	ProperStrand	13	chr11	78564656	78564719	protein_coding	Fam58b	exon	ENSMUSG00000049489	ProperStrand	2	1	-inf
chr15	81781741	81781818	protein_coding	Pmm1	utr3	ENSMUSG00000022474	ProperStrand	24	chr3	135275489	135275506	protein_coding	Nfkb1	exon	ENSMUSG00000028163	NonProperStrand	16	1	-17.7988
chr2	32817447	32817547	protein_coding-noncoding	Rpl12	utr5	ENSMUSG00000038900	ProperStrand	68	chr17	35087895	35087949	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	4	-15.4485
chr7	149268374	149268391	protein_coding	Dusp8	exon	ENSMUSG00000037887	ProperStrand	6	chr9	40612865	40612921	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	1	-14.2965
chr18	10052131	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr6	131337993	131338009	protein_coding	Csda	intron	ENSMUSG00000030189	ProperStrand	86	1	-8.0809
chr10	6225307	6225336	protein_coding	Mthfd1l	intron	ENSMUSG00000040675	NonProperStrand	14	chr18	35716761	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-11.7353
chr17	39979942	39980013	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr14	47808947	47808963	protein_coding	Gch1	utr5	ENSMUSG00000037580	NonProperStrand	31	3	-18.2902
chr17	56753928	56762632	protein_coding	Lonp1	exon	ENSMUSG00000041168	ProperStrand	83	chr16	23110891	23111001	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-2.0696
chrX	147501615	147501715	protein_coding	Fgd1	exon	ENSMUSG00000025265	NonProperStrand	9	chr7	128200871	128200887	protein_coding	Mettl9	exon	ENSMUSG00000030876	ProperStrand	20	1	-18.5402
chr15	79913288	79913353	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr5	33144773	33144873	protein_coding	RP23-118L1.1	intron	ENSMUSG00000093574	ProperStrand	9	1	-7.3434
chr11	55048709	55048726	protein_coding	Slc36a1	utr3	ENSMUSG00000020261	NonProperStrand	1	chr9	75473767	75473783	protein_coding	Lysmd2	exon	ENSMUSG00000032184	NonProperStrand	20	1	-inf
chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	chr11	106362303	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-2.1226
chr7	51097700	51097718	protein_coding	Klk5	exon	ENSMUSG00000074155	ProperStrand	29	chr11	97642952	97643014	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.7822
chr1	181320404	181320424	protein_coding	Smyd3	intron	ENSMUSG00000055067	NonProperStrand	190	chr15	34370546	34370636	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-1.5949
chr4	117898727	117950313	protein_coding	Ptprf	exon	ENSMUSG00000033295	ProperStrand	337	chr17	24857715	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	7	-4.4474
chr19	45071862	45071878	protein_coding	Sema4g	exon	ENSMUSG00000025207	ProperStrand	58	chr4	154963810	154963843	protein_coding	Nadk	utr3	ENSMUSG00000029063	ProperStrand	25	1	-15.1650
chr17	46861595	46861611	protein_coding	Pex6	exon	ENSMUSG00000002763	ProperStrand	292	chr15	79908929	79908955	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-2.5343
chr10	44840637	44845776	protein_coding	Prep	exon	ENSMUSG00000019849	NonProperStrand	3	chr7	30026273	30026289	protein_coding	Yif1b	intron	ENSMUSG00000030588	ProperStrand	154	1	-17.7918
chr8	24360862	24367150	protein_coding	Golga7	exon	ENSMUSG00000015341	ProperStrand	36	chr11	6428038	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.1415
chr18	74439570	74439637	protein_coding	Mbd1	intron	ENSMUSG00000024561	ProperStrand	13	chr1	162966008	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-6.5934
chr14	22489447	22489537	protein_coding	Myst4	exon	ENSMUSG00000021767	ProperStrand	151	chr5	34692206	34692638	protein_coding	Rnf4	exon	ENSMUSG00000029110	ProperStrand	27	5	-inf
chr5	100855902	100855941	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr11	102337591	102337656	protein_coding	Gpatch8	utr3	ENSMUSG00000034621	ProperStrand	49	1	-7.0403
chr11	90202076	90202092	protein_coding	Hlf	exon	ENSMUSG00000003949	NonProperStrand	25	chr17	75021381	75021522	protein_coding	Birc6	exon	ENSMUSG00000024073	ProperStrand	110	10	-inf
chr1	164476231	164476257	protein_coding	Mettl13	exon	ENSMUSG00000026694	ProperStrand	26	chr2	26494700	26494795	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	3	-11.2300
chr12	110098641	110098714	protein_coding	Wars	utr3	ENSMUSG00000021266	ProperStrand	12	chr7	108971290	108971306	protein_coding	Inppl1	utr3	ENSMUSG00000032737	ProperStrand	272	1	-13.5679
chr2	145076804	145209256	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	chr10	80641702	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	1	-2.2690
chr11	3649570	3649587	protein_coding	Osbp2	intron	ENSMUSG00000020435	ProperStrand	60	chr10	23505156	23505255	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.2332
chr16	44215865	44215955	protein_coding	Gm608	exon	ENSMUSG00000068284	ProperStrand	17	chr11	69483148	69483228	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.7874
chr2	119848116	119848185	protein_coding	Mapkbp1	exon	ENSMUSG00000033902	ProperStrand	6	chr14	33005085	33005139	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	2	-14.0159
chr17	66468407	66468428	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	chr14	76247733	76247835	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	5	-7.1777
chr18	33954814	33954840	lincRNA	2410004N09Rik	intron	ENSMUSG00000087590	ProperStrand	15	chr17	35089184	35089225	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-8.2628
chr7	108971290	108971306	protein_coding	Inppl1	utr3	ENSMUSG00000032737	ProperStrand	272	chr16	23110454	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-0.9726
chr2	53003875	53003891	protein_coding	Prpf40a	exon	ENSMUSG00000061136	ProperStrand	129	chr7	116664813	116664872	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.3416
chr2	26494771	26494857	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr15	5068426	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	5	-3.1710
chr2	51966456	51966473	protein_coding	Rif1	exon	ENSMUSG00000036202	ProperStrand	201	chr10	85517996	85518012	protein_coding	Syn3	utr3	ENSMUSG00000059602	NonProperStrand	40	1	-11.7065
chr8	87194603	87194703	protein_coding	Nacc1	utr3	ENSMUSG00000001910	ProperStrand	130	chr17	33961391	33961416	protein_coding	Rps28	exon	ENSMUSG00000067288	ProperStrand	52	1	-12.0490
chr10	61333253	61333276	protein_coding	Col13a1	intron	ENSMUSG00000058806	NonProperStrand	8	chr16	23110940	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.2180
chr2	164256717	164256766	protein_coding	Sdc4	exon	ENSMUSG00000017009	ProperStrand	177	chr9	15118285	15118322	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-1.6335
chr6	47738094	47738122	misc_RNA	Y_RNA	.	ENSMUSG00000065701	ProperStrand	129	chr3	108357255	108357355	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-3.1164
chr15	75887870	75887910	protein_coding	Scrib	exon	ENSMUSG00000022568	ProperStrand	154	chr13	22132881	22132940	protein_coding	Hist1h4i	exon	ENSMUSG00000060639	ProperStrand	8	2	-19.4922
chr11	120429387	120429477	protein_coding	P4hb	intron	ENSMUSG00000025130	ProperStrand	83	chr17	24857727	24857807	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.7731
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr2	138188029	138188045	protein_coding	Btbd3	intron	ENSMUSG00000062098	NonProperStrand	121	1	-7.9669
chr7	117166758	117166858	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	chr3	153574613	153574654	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	1	-1.6104
chr17	28331927	28331947	protein_coding	Zfp523	exon	ENSMUSG00000024220	ProperStrand	26	chr7	117166818	117166861	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-6.4606
chr6	121535465	121535555	LINE	L1_Mus1	L1	chr6L1_Mus1121530743	NonProperStrand	1	chr6	132356660	132356750	LTR	MMERVK10C-int	ERVK	chr6MMERVK10C-int132355977	NonProperStrand	1	1	-inf
chrX	71069653	71069753	protein_coding	Pdzd4	utr5	ENSMUSG00000002006	ProperStrand	20	chr16	23110564	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.4825
chr11	62416575	62416606	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr10	23506278	23506345	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-2.8217
chr8	24814174	24814216	protein_coding	Zmat4	intron	ENSMUSG00000037492	ProperStrand	18	chr17	62956666	62956683	protein_coding	Efna5	utr3	ENSMUSG00000048915	NonProperStrand	32	1	-16.9757
chr4	43505656	43505931	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr7	13516148	13516206	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	8	-4.6499
chr18	57514477	57514498	protein_coding	Prrc1	utr5	ENSMUSG00000024594	NonProperStrand	22	chr5	130300436	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.3511
chr17	35822057	35822257	protein_coding	Ddr1	exon	ENSMUSG00000003534	ProperStrand	129	chr11	20012622	20012638	protein_coding	Actr2	intron	ENSMUSG00000020152	ProperStrand	72	1	-11.4100
chr17	30772308	30772324	protein_coding	Dnahc8	utr5	ENSMUSG00000033826	ProperStrand	246	chr19	8963117	8963195	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-0.9559
chr6	30446274	30446364	protein_coding	Tmem209	intron	ENSMUSG00000029782	ProperStrand	36	chr5	108336375	108336455	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-5.8797
chr2	120551797	120551922	protein_coding	Cdan1	exon	ENSMUSG00000027284	ProperStrand	13	chr5	141090405	141090422	protein_coding	Lfng	exon	ENSMUSG00000029570	NonProperStrand	92	1	-15.5908
chr8	72659479	72660147	protein_coding	Rfxank	exon	ENSMUSG00000036120	ProperStrand	6	chr4	131865887	131865977	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-6.1051
chr8	72709926	72709943	protein_coding	Slc25a42	utr3	ENSMUSG00000002346	NonProperStrand	7	chr4	131865855	131865901	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.7768
chr11	97043073	97046246	protein_coding	Kpnb1	exon	ENSMUSG00000001440	ProperStrand	197	chr10	90581049	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-2.6178
chr12	84180387	84180403	protein_coding	Rgs6	intron	ENSMUSG00000021219	NonProperStrand	65	chr16	23111775	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.7776
chr15	51464723	51464742	LINE	Lx8	L1	chr15Lx851464497	ProperStrand	1	chr19	6504201	6504218	protein_coding	Nrxn2	intron	ENSMUSG00000033768	NonProperStrand	8	1	-inf
chr16	75761550	75765200	protein_coding	Hspa13	exon	ENSMUSG00000032932	NonProperStrand	57	chr11	69483190	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	8	-19.6498
chrX	33607699	33607715	protein_coding	Dock11	exon	ENSMUSG00000031093	ProperStrand	42	chr10	110918594	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-4.1148
chr4	131866154	131866286	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	chr14	76247711	76247842	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	44	-8.4588
chr17	13115516	13115589	protein_coding	Tcp1	exon	ENSMUSG00000068039	ProperStrand	116	chr17	24857742	24857832	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.2820
chr17	15872697	15872777	protein_coding	Chd1	exon	ENSMUSG00000023852	ProperStrand	82	chr7	49961849	49961939	protein_coding	Gm17067	utr3	ENSMUSG00000091594	ProperStrand	2	1	-20.6649
chr15	102495638	102496212	protein_coding	Atp5g2	exon	ENSMUSG00000062683	ProperStrand	32	chr5	130295519	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-6.4875
chr5	100855929	100855955	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr3	134964173	134964193	protein_coding	Bdh2	intron	ENSMUSG00000028167	ProperStrand	4	1	-12.2924
chr9	64022854	64022944	protein_coding	Rpl4	intron	ENSMUSG00000032399	ProperStrand	608	chr11	93811271	93811348	protein_coding	Gm20390	exon	ENSMUSG00000091228	ProperStrand	33	1	-9.8834
chr4	131908357	131908464	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr7	29136530	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	14	-2.1058
chr5	45253818	45253834	LTR	MLT1D	MaLR	chr5MLT1D45253615	ProperStrand	26	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.1929
chr8	86352554	86352573	LINE	Lx6	L1	chr8Lx686352528	ProperStrand	11	chr1	162968212	162968236	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-10.2620
chr11	5181346	5181363	protein_coding	Znrf3	exon	ENSMUSG00000041961	ProperStrand	63	chr17	35088957	35089021	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-5.7719
chr6	48013766	48013856	protein_coding	Zfp746	utr3	ENSMUSG00000057691	ProperStrand	23	chr12	60141407	60141487	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-8.7551
chr8	109190129	109190208	protein_coding	Cdh1	exon	ENSMUSG00000000303	ProperStrand	283	chr4	131865417	131865507	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-1.3717
chr6	143155186	143155310	protein_coding	Etnk1	utr3	ENSMUSG00000030275	ProperStrand	61	chr10	110918674	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-3.4184
chr15	98475734	98475834	protein_coding	Ddx23	utr3	ENSMUSG00000003360	ProperStrand	63	chr5	108336418	108336490	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-4.7868
chr7	137812904	137812921	protein_coding	Tacc2	intron	ENSMUSG00000030852	ProperStrand	95	chr7	116664794	116664872	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.7944
chr2	25056568	25056662	protein_coding	Cobra1	exon	ENSMUSG00000013465	ProperStrand	17	chr15	79908928	79908984	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-7.9934
chr4	149026816	149026832	protein_coding	Pik3cd	exon	ENSMUSG00000039936	ProperStrand	151	chr16	23110455	23110485	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-2.0815
chr10	113301242	113301260	LTR	RLTR20A2	ERVK	chr10RLTR20A2113301042	NonProperStrand	1	chr4	118966906	118966943	protein_coding	Ybx1	exon	ENSMUSG00000028639	ProperStrand	171	1	-inf
chr6	28371266	28371366	protein_coding	Gcc1	utr5	ENSMUSG00000029708	ProperStrand	5	chr9	64024976	64024997	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	1	-14.3037
chr16	32020237	32020327	protein_coding	Pak2	utr3	ENSMUSG00000022781	ProperStrand	7	chr4	131865856	131865936	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.7768
chr18	76423923	76423955	protein_coding	Smad2	intron	ENSMUSG00000024563	ProperStrand	15	chr7	116663719	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-8.4879
chr2	37772902	37772928	protein_coding	Dennd1a	intron	ENSMUSG00000035392	ProperStrand	24	chr2	26494708	26494762	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	3	-11.5621
chr10	122002814	122002894	LINE	L1Md_F2	L1	chr10L1Md_F2122002095	ProperStrand	17	chr7	5361075	5361166	protein_coding	Vmn1r58	utr3	ENSMUSG00000078808	ProperStrand	5	1	-19.9083
chr16	20740064	20740081	protein_coding	Chrd	exon	ENSMUSG00000006958	NonProperStrand	8	chr11	77995228	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	2	-16.3836
chr1	123458279	123458637	protein_coding	Ddx18	exon	ENSMUSG00000001674	NonProperStrand	1	chr7	116663669	116663749	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	NonProperStrand	51	1	-inf
chr7	54248556	54248586	protein_coding	Spty2d1	utr3	ENSMUSG00000049516	ProperStrand	20	chr7	29136526	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.3737
chr1	82735933	82735967	protein_coding	Mff	intron	ENSMUSG00000026150	ProperStrand	12	chr7	118219574	118219601	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-11.9211
chr11	98442896	98442976	protein_coding	Ormdl3	utr3	ENSMUSG00000038150	ProperStrand	1	chr16	3986611	3986629	protein_coding	Slx4	exon	ENSMUSG00000039738	NonProperStrand	6	1	-inf
chr10	127962583	127962600	protein_coding	Esyt1	exon	ENSMUSG00000025366	NonProperStrand	32	chr3	88952697	88952713	protein_coding	Hcn3	exon	ENSMUSG00000028051	ProperStrand	40	2	-22.3503
chr6	67484401	67484418	protein_coding	Tacstd2	utr3	ENSMUSG00000051397	ProperStrand	5	chr16	23110959	23110993	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr18	35714143	35714291	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	chr11	116938557	116938749	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	27	-12.8924
chr2	84530865	84531297	protein_coding	Zdhhc5	exon	ENSMUSG00000034075	NonProperStrand	144	chr7	26029736	26029792	protein_coding	Erf	exon	ENSMUSG00000040857	ProperStrand	20	2	-19.1795
chr3	91019706	91019796	LTR	IAPLTR3-int	ERVK	chr3IAPLTR3-int91018605	ProperStrand	1	chr6	143834588	143834678	protein_coding	Sox5	intron	ENSMUSG00000041540	NonProperStrand	49	1	-inf
chr2	167367569	167367586	protein_coding	Snai1	utr3	ENSMUSG00000042821	ProperStrand	2	chr10	23505216	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-inf
chr6	108439876	108443771	protein_coding	Itpr1	exon	ENSMUSG00000030102	ProperStrand	94	chr17	24857750	24857786	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.5840
chr9	102774638	102774738	protein_coding	Ryk	intron	ENSMUSG00000032547	ProperStrand	25	chr7	29136525	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	8	-20.3353
mmu-miR-5100	5	20	miRNA	mmu-miR-5100	.	mmu-miR-5100	ProperStrand	132	chr7	16524119	16524219	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	1	-8.1410
chr8	87794645	87794713	protein_coding	Vps35	exon	ENSMUSG00000031696	ProperStrand	27	chr10	39978286	39978376	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-7.0424
chr17	34764851	34764951	protein_coding	Ppt2	utr5	ENSMUSG00000015474	NonProperStrand	1	chr9	63868722	63868739	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	1	-inf
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr10	80078435	80078452	protein_coding	Scamp4	utr3	ENSMUSG00000078441	NonProperStrand	20	1	-9.2402
chr3	52388277	52388294	SINE	B4A	B4	chr3B4A52388218	ProperStrand	169	chr13	23362311	23362344	tRNA	tRNA969-IleTAT	.	1779278	ProperStrand	1	1	-inf
chr14	80262508	80262525	lincRNA	Gm6999	intron	ENSMUSG00000075495	ProperStrand	265	chr11	68886975	68887038	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-1.5762
chr15	101032573	101033381	protein_coding	Acvr1b	exon	ENSMUSG00000000532	ProperStrand	259	chr2	26493384	26493484	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-1.3004
chr1	72284993	72285050	lincRNA	D230017M19Rik	intron	ENSMUSG00000085769	ProperStrand	23	chr16	23110834	23110876	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.7108
chr7	132811519	132811584	protein_coding	Gtf3c1	exon	ENSMUSG00000032777	ProperStrand	161	chr11	6428055	6428102	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-2.8863
chr5	31797422	31797512	protein_coding-noncoding	Gpn1	utr5	ENSMUSG00000064037	ProperStrand	1	chr5	31797651	31797741	protein_coding	Gpn1	intron	ENSMUSG00000064037	ProperStrand	12	1	-inf
chr19	8967637	8969278	protein_coding	Ints5	exon	ENSMUSG00000071652	ProperStrand	6	chr10	23505152	23505277	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-5.3874
chr10	110918574	110918664	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	chr7	128061066	128061123	tRNA	tRNA559-LeuAAG	.	13984	ProperStrand	7	6	-inf
chr2	27380649	27391656	protein_coding	Wdr5	exon	ENSMUSG00000026917	ProperStrand	81	chr16	23110899	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-1.4289
chr15	94416715	94416736	protein_coding	Twf1	intron	ENSMUSG00000022451	ProperStrand	32	chr10	39978436	39978471	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-6.7020
chr1	24621343	24621407	protein_coding	Gm10925	utr3	ENSMUSG00000090378	ProperStrand	320	chr6	131330325	131330415	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	ProperStrand	408	1	-6.1485
chr2	26494769	26494859	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr9	64143776	64143856	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-1.2597
chr11	29593370	29593412	protein_coding	Rtn4	exon	ENSMUSG00000020458	ProperStrand	117	chr17	56915421	56915437	protein_coding	Rfx2	utr3	ENSMUSG00000024206	NonProperStrand	9	1	-15.8412
chr4	75094306	75094322	LINE	Lx9	L1	chr4Lx975094037	ProperStrand	41	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.3878
chr4	147385125	147385141	protein_coding	Clcn6	exon	ENSMUSG00000029016	ProperStrand	120	chr11	62416578	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-3.8450
chr2	153487266	153487302	protein_coding	Dnmt3b	exon	ENSMUSG00000027478	ProperStrand	19	chr11	69483136	69483236	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.5692
chrX	98632652	98634838	protein_coding	Nono	exon	ENSMUSG00000031311	ProperStrand	102	chr13	9636396	9636413	protein_coding	Dip2c	exon	ENSMUSG00000048264	NonProperStrand	51	1	-12.5759
chr12	79327803	79444359	protein_coding	Gphn	exon	ENSMUSG00000047454	ProperStrand	9	chr16	23111708	23111798	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-17.4131
chr8	28161817	28162731	protein_coding	Prosc	exon	ENSMUSG00000031485	ProperStrand	14	chr4	122968629	122968719	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	2	-14.6890
chr16	15624675	15624765	protein_coding	Mcm4	utr3	ENSMUSG00000022673	ProperStrand	51	chr7	116663665	116663745	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.7941
chr13	23312577	23312595	LINE	L1MB2	L1	chr13L1MB223312569	NonProperStrand	4	chr17	35299507	35299641	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	2	-16.8518
chr10	121307271	121307293	protein_coding	Srgap1	intron	ENSMUSG00000020121	ProperStrand	33	chr18	33954914	33954946	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-4.6356
chr12	58691976	58691992	antisense	4921518K17Rik	.	ENSMUSG00000085851	ProperStrand	75	chr2	143780504	143780553	protein_coding	Rrbp1	exon	ENSMUSG00000027422	ProperStrand	76	1	-12.3898
chr5	23907915	23907931	protein_coding	Abcb8	exon	ENSMUSG00000028973	NonProperStrand	49	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-8.1326
chr14	57676676	57676692	protein_coding	Gja3	utr5	ENSMUSG00000048582	ProperStrand	34	chr1	89681355	89681396	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-6.5621
chr3	52388277	52388294	SINE	B4A	B4	chr3B4A52388218	ProperStrand	169	chr11	69560982	69561515	protein_coding	Polr2a	exon	ENSMUSG00000005198	ProperStrand	200	1	-8.8239
chr3	63825082	63825133	protein_coding	Gmps	utr3	ENSMUSG00000027823	ProperStrand	30	chr11	98878376	98878466	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-7.6672
chr15	100908989	100909007	Simple_repeat	(CCCCG)n	Simple_repeat	chr15(CCCCG)n100908987	ProperStrand	1	chr17	24857717	24857807	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-inf
chr12	85292163	85292237	protein_coding	2410016O06Rik	exon	ENSMUSG00000046791	ProperStrand	27	chr4	131865381	131865471	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	4	-17.1420
chr7	131059330	131059348	LINE	Lx8	L1	chr7Lx8131059026	ProperStrand	1	chr1	133057080	133057129	protein_coding	Eif2d	exon	ENSMUSG00000026427	ProperStrand	12	1	-inf
chr11	97889223	97889661	protein_coding	Rpl19	exon	ENSMUSG00000017404	ProperStrand	120	chr16	36074359	36074405	protein_coding	Ccdc58	intron	ENSMUSG00000075229	ProperStrand	18	1	-14.3613
chr19	8797987	8798320	lincRNA	Snhg1	exon	ENSMUSG00000090867	ProperStrand	100	chr15	34370545	34370607	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-4.6125
chr2	130103751	130103808	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	chr1	162965993	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	3	-1.1263
chr4	102853012	102853030	protein_coding	Slc35d1	intron	ENSMUSG00000028521	ProperStrand	33	chr8	122065555	122066060	protein_coding	Mbtps1	exon	ENSMUSG00000031835	ProperStrand	81	1	-13.9189
chr12	101546398	101546415	protein_coding	Ttc7b	intron	ENSMUSG00000033530	NonProperStrand	15	chr1	135035299	135035364	protein_coding	Ppp1r15b	utr3	ENSMUSG00000046062	ProperStrand	46	1	-16.7407
chr7	134671405	134671505	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	chr1	9932550	9932595	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-2.5489
chr6	137694067	137694087	protein_coding	Strap	exon	ENSMUSG00000030224	ProperStrand	27	chr2	158185580	158185656	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-8.0832
chr18	75161579	75161602	protein_coding	Rpl17	intron	ENSMUSG00000062328	ProperStrand	90	chr2	26494706	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.3986
chr3	75325112	75325230	protein_coding-noncoding	Pdcd10	utr3	ENSMUSG00000027835	ProperStrand	1	chr16	23110941	23110963	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr10	79501302	79502371	protein_coding	Polr2e	exon	ENSMUSG00000004667	ProperStrand	37	chr7	52382247	52382283	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-9.2551
chr8	89996473	89996491	protein_coding	Cbln1	utr5	ENSMUSG00000031654	NonProperStrand	1	chr9	120037898	120037974	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-inf
chr8	125626932	125626996	snoRNA	ENSMUSG00000064450_Snord68	.	ENSMUSG00000064450	ProperStrand	181	chr1	162967489	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-2.9780
chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr10	110918549	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	7	-2.7030
chr17	56564652	56564689	protein_coding	Ptprs	intron	ENSMUSG00000013236	ProperStrand	152	chr9	101990649	101990668	protein_coding	Ephb1	intron	ENSMUSG00000032537	ProperStrand	13	1	-14.5675
chr16	72800514	72800532	protein_coding	Robo1	intron	ENSMUSG00000022883	NonProperStrand	188	chr16	23110454	23110576	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-2.6931
chr19	8798740	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	chr4	56910496	56910625	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	9	-3.4206
chr5	135421633	135421719	protein_coding	Cldn4	utr3	ENSMUSG00000047501	ProperStrand	12	chr12	112779148	112779238	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	2	-12.8706
chr5	124900825	124901320	protein_coding	Setd8	exon	ENSMUSG00000049327	ProperStrand	71	chr10	110918553	110918633	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-3.1426
chr16	98168829	98168846	protein_coding	Zfp295	utr3	ENSMUSG00000046962	ProperStrand	63	chr4	131865460	131865506	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	2	-6.5884
chrX	72354260	72354350	protein_coding	Dkc1	utr3	ENSMUSG00000031403	ProperStrand	89	chr9	15119646	15119726	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	6	-12.2754
chr8	11427556	11427572	protein_coding	Col4a2	exon	ENSMUSG00000031503	ProperStrand	74	chr19	8799042	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-5.4221
chr10	24864794	24864884	LINE	Lx8	L1	chr10Lx824864537	ProperStrand	1	chr10	24864962	24865052	LTR	RLTR11A	ERVK	chr10RLTR11A24864869	NonProperStrand	1	1	-inf
chr2	179889992	179890038	protein_coding	Osbpl2	exon	ENSMUSG00000039050	ProperStrand	6	chr9	15118283	15118321	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-13.1682
chr3	89050307	89050324	protein_coding	Krtcap2	exon	ENSMUSG00000042747	ProperStrand	17	chr11	106362619	106362637	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-9.9536
chr3	46250662	46250678	protein_coding	Pabpc4l	exon	ENSMUSG00000090919	ProperStrand	137	chr5	121655128	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.2825
chr4	68423440	68423457	protein_coding	Dbc1	exon	ENSMUSG00000028351	ProperStrand	78	chr4	131908689	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.8889
chr5	115956842	115956858	protein_coding	Pxn	utr5	ENSMUSG00000029528	ProperStrand	171	chr11	69730953	69730981	protein_coding	Eif5a	exon	ENSMUSG00000078812	ProperStrand	164	1	-9.1963
chr12	78361194	78361211	protein_coding	Fut8	intron	ENSMUSG00000021065	NonProperStrand	9	chr13	54686332	54686395	protein_coding	Nop16	utr3	ENSMUSG00000025869	ProperStrand	11	1	-19.2632
chr10	80862706	80862796	protein_coding	Nfic	utr3	ENSMUSG00000055053	ProperStrand	69	chr9	120038553	120038633	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.7911
chr7	150717298	150717367	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	chr14	76247710	76247829	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	26	-12.8745
chr5	74489271	74489567	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr14	52829458	52829568	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	3	-3.5602
chr7	134417069	134417145	protein_coding	Sephs2	exon	ENSMUSG00000049091	ProperStrand	15	chr13	51743581	51743644	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	5	-inf
chr8	73419650	73419679	protein_coding	Rpl18a	intron	ENSMUSG00000045128	NonProperStrand	2	chr8	73419683	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	NonProperStrand	53	1	-inf
chr3	95125134	95125271	protein_coding	Lass2	exon	ENSMUSG00000015714	ProperStrand	16	chr16	23111773	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.2713
chr11	69557368	69557433	protein_coding	Polr2a	exon	ENSMUSG00000005198	ProperStrand	200	chr8	64182067	64182085	protein_coding	Palld	intron	ENSMUSG00000058056	ProperStrand	39	2	-17.9531
chr9	121661376	121661436	protein_coding	Nktr	intron	ENSMUSG00000032525	ProperStrand	41	chr7	117189995	117190025	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.0404
chr6	86678013	86678047	protein_coding	Gmcl1	intron	ENSMUSG00000001157	ProperStrand	17	chr16	23111448	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-8.5786
chr13	58228760	58228860	protein_coding	Hnrnpa0	exon	ENSMUSG00000007836	ProperStrand	110	chr4	131865917	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-3.0230
chr16	18893018	18893077	protein_coding	Hira	intron	ENSMUSG00000022702	ProperStrand	28	chr1	162967491	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.9223
chr1	183835958	183836537	protein_coding	Enah	utr3	ENSMUSG00000022995	ProperStrand	196	chr4	56910510	56910590	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-3.8303
chr1	167828267	167828284	protein_coding	Pou2f1	intron	ENSMUSG00000026565	NonProperStrand	33	chr18	20904465	20904598	protein_coding	B4galt6	utr5	ENSMUSG00000056124	ProperStrand	31	1	-15.8227
chr1	154695807	154695912	protein_coding	Smg7	exon	ENSMUSG00000042772	ProperStrand	88	chr1	162968458	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-5.3292
chr4	130272249	130272316	protein_coding	Pum1	intron	ENSMUSG00000028580	ProperStrand	131	chr15	79913287	79913329	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.2173
chr17	56263554	56263621	protein_coding	Sema6b	exon	ENSMUSG00000001227	ProperStrand	3	chr2	26494739	26494829	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-9.2771
chr8	44273041	44273141	protein_coding	Triml2	intron	ENSMUSG00000091490	ProperStrand	32	chr11	55296204	55296275	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-7.4316
chr19	5798611	5798651	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr5	108336391	108336490	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	4	-2.4483
chr12	12946989	12947040	protein_coding	Mycn	exon	ENSMUSG00000037169	ProperStrand	24	chr12	60141354	60141396	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-8.6686
chr12	31975135	31975152	protein_coding	Lamb1	intron	ENSMUSG00000002900	NonProperStrand	45	chr1	162965530	162965571	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.8074
chr9	44918660	44918676	protein_coding	Gm10684	utr5	ENSMUSG00000074385	ProperStrand	17	chr15	34370545	34370664	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-5.9911
chr9	121664606	121664622	protein_coding	Nktr	utr3	ENSMUSG00000032525	NonProperStrand	2	chr10	23505157	23505234	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-8.0476
chr6	91472454	91472499	protein_coding	Lsm3	utr3	ENSMUSG00000090846	ProperStrand	6	chr7	117166761	117166851	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	3	-18.8610
chr11	95142926	95143203	protein_coding	Myst2	exon	ENSMUSG00000038909	NonProperStrand	2	chr8	129468762	129468852	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	NonProperStrand	22	1	-inf
chr11	72257516	72260792	protein_coding	Mybbp1a	exon	ENSMUSG00000040463	ProperStrand	279	chr9	15118259	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	29	-20.0115
chr2	19314954	19314972	protein_coding	Msrb2	exon	ENSMUSG00000023094	ProperStrand	4	chr5	35226746	35228080	protein_coding	Htt	exon	ENSMUSG00000029104	NonProperStrand	9	1	-19.8837
chr3	54497114	54497130	protein_coding	Fam48a	utr5	ENSMUSG00000027751	ProperStrand	16	chr6	71832550	71832602	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-8.2591
chr4	131908227	131908255	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr1	71632809	71632857	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	1	-2.1202
chr12	21397150	21397250	protein_coding	Ywhaq	utr3	ENSMUSG00000076432	ProperStrand	70	chr2	130102052	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	7	-19.7715
chr2	26493438	26494768	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr17	13112452	13112587	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	8	-2.3325
chr8	125098869	125098889	protein_coding	Aprt	exon	ENSMUSG00000006589	ProperStrand	20	chr14	65437155	65437271	protein_coding	Hmbox1	intron	ENSMUSG00000021972	ProperStrand	35	1	-16.6921
chr13	68759738	68764669	protein_coding	Adcy2	exon	ENSMUSG00000021536	ProperStrand	237	chr6	124665398	124665509	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	1	-4.2619
chr2	129998653	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr16	90225428	90225448	protein_coding	Sod1	exon	ENSMUSG00000022982	ProperStrand	75	1	-7.6638
chr8	4243749	4243846	protein_coding	Map2k7	exon	ENSMUSG00000002948	ProperStrand	32	chr2	145077955	145209255	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	6	-22.9718
chr19	7274494	7274528	protein_coding	Otub1	exon	ENSMUSG00000024767	ProperStrand	9	chr11	55296208	55296276	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	3	-21.5924
chr9	63271186	63271276	lincRNA	Gm16759	intron	ENSMUSG00000086539	ProperStrand	5	chr9	63448481	63448561	protein_coding	Iqch	intron	ENSMUSG00000037801	NonProperStrand	2	1	-inf
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr2	26451868	26451884	protein_coding	Gm20532	intron	ENSMUSG00000092356	ProperStrand	46	1	-8.3272
chr13	23643321	23643411	protein_coding	Hist1h4f	exon	ENSMUSG00000069274	ProperStrand	28	chr2	26493410	26493490	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-5.2032
chr12	112779157	112779237	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	chr14	76372296	76372386	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	1	-1.1016
chr17	34727760	34727777	protein_coding	Gpsm3	exon	ENSMUSG00000034786	ProperStrand	12	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-6.4045
chr4	137951171	137951189	protein_coding	Fam43b	exon	ENSMUSG00000078235	ProperStrand	12	chr12	17552949	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	4	-19.3327
chr9	103086871	103086898	protein_coding	Rab6b	utr3	ENSMUSG00000032549	ProperStrand	4	chr18	35714159	35714292	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-8.9582
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr7	51503480	51503548	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	1	-4.2973
chr2	117950847	117950867	protein_coding	Thbs1	utr3	ENSMUSG00000040152	ProperStrand	8	chr11	6428035	6428117	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-11.6954
chr8	98270003	98270084	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	chr11	116938661	116938751	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	20	-19.0284
chr3	144383075	144383092	protein_coding	Sh3glb1	utr5	ENSMUSG00000037062	NonProperStrand	7	chr11	97642952	97643052	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-6.6269
chr15	102262641	102262657	protein_coding	Sp1	utr3	ENSMUSG00000001280	ProperStrand	124	chr2	130103432	130103500	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-6.6208
chr3	141497469	141497486	protein_coding	Unc5c	utr3	ENSMUSG00000059921	NonProperStrand	19	chr7	116663652	116663710	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.6387
chr15	36171340	36171430	protein_coding	Rnf19a	exon	ENSMUSG00000022280	ProperStrand	9	chr12	112779161	112779241	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-8.5940
chr9	64333076	64333098	protein_coding	Megf11	intron	ENSMUSG00000036466	NonProperStrand	64	chr2	130101241	130101308	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-6.4634
chr13	10623515	10623534	lincRNA	Gm16950	intron	ENSMUSG00000086178	NonProperStrand	3	chr15	79913288	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-9.8112
chr9	40610516	40610597	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr3	79223176	79223193	protein_coding	Gm17359	intron	ENSMUSG00000091685	NonProperStrand	50	1	-8.5043
chr3	55987230	55987247	protein_coding	Nbea	utr5	ENSMUSG00000027799	NonProperStrand	115	chr4	153393840	153393936	protein_coding	Lrrc47	exon	ENSMUSG00000029028	ProperStrand	30	1	-13.4101
chr7	80619502	80620247	protein_coding	Chd2	exon	ENSMUSG00000078671	ProperStrand	69	chr8	73419657	73419757	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	5	-12.8908
chr4	122968597	122968689	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	chr5	130295414	130295508	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	4	-1.1954
chr19	48280530	48280546	protein_coding	Sorcs3	utr5	ENSMUSG00000063434	NonProperStrand	43	chr4	131865869	131865934	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.3073
chr4	140121137	140121154	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	chr11	69481332	69481476	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-3.3115
chr15	85730948	85731080	protein_coding	Celsr1	utr3	ENSMUSG00000016028	ProperStrand	56	chr4	129669559	129669576	protein_coding	Bai2	exon	ENSMUSG00000028782	NonProperStrand	8	1	-17.4684
chr9	25059948	25059964	protein_coding	Sept7	intron	ENSMUSG00000001833	ProperStrand	101	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-8.3270
chr19	6314735	6325234	protein_coding	Cdc42bpg	utr3	ENSMUSG00000024769	ProperStrand	90	chr16	23111375	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	14	-20.4606
chr3	90197173	90197671	protein_coding	Ints3	exon	ENSMUSG00000027933	ProperStrand	87	chr10	96081643	96081666	protein_coding	Btg1	utr3	ENSMUSG00000036478	ProperStrand	21	1	-14.6875
chr1	40053934	40053951	protein_coding	Map4k4	exon	ENSMUSG00000026074	ProperStrand	348	chrX	132673816	132673833	protein_coding	Bex4	intron	ENSMUSG00000047844	NonProperStrand	70	1	-9.4819
chr16	91505691	91505752	protein_coding	Ifnar1	utr3	ENSMUSG00000022967	ProperStrand	13	chr2	26493366	26493449	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-6.7422
chr14	55270849	55270895	protein_coding	Acin1	intron	ENSMUSG00000022185	ProperStrand	67	chr14	31827516	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	2	-10.8516
chr1	135170753	135170770	protein_coding	Plekha6	exon	ENSMUSG00000041757	NonProperStrand	40	chr16	23111446	23111503	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.8604
chr13	9833562	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr19	5950911	5950996	protein_coding	Pola2	intron	ENSMUSG00000024833	ProperStrand	29	4	-19.4884
chr1	29666277	29666294	LTR	MMERVK10C-int	ERVK	chr1MMERVK10C-int29665214	ProperStrand	10	chr4	131865461	131865495	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-7.5608
chr18	53873048	53874433	protein_coding	Cep120	exon	ENSMUSG00000048799	ProperStrand	91	chr4	131865856	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	8	-13.0399
chr10	53260874	53261344	protein_coding	Mcm9	exon	ENSMUSG00000058298	NonProperStrand	16	chr18	33954843	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-6.0667
chr8	36529522	36529538	protein_coding	Eri1	utr3	ENSMUSG00000031527	NonProperStrand	97	chr19	8799830	8799895	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-4.0304
chr4	41444012	41444063	protein_coding	AI464131	utr3	ENSMUSG00000046312	ProperStrand	12	chr10	62228322	62228372	snoRNA	ENSMUSG00000080469_Snord98	.	ENSMUSG00000080469	ProperStrand	124	2	-inf
chr3	98117130	98117159	protein_coding	Phgdh	utr3	ENSMUSG00000053398	ProperStrand	46	chr8	73223964	73224081	protein_coding	Jund	utr3	ENSMUSG00000071076	ProperStrand	50	2	-19.8547
chr11	78021631	78021678	protein_coding	Supt6h	exon	ENSMUSG00000002052	ProperStrand	119	chr8	4267337	4267649	protein_coding	Timm44	exon	ENSMUSG00000002949	ProperStrand	63	1	-11.8404
chr5	100855904	100855973	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr4	97812275	97812291	protein_coding	Nfia	intron	ENSMUSG00000028565	NonProperStrand	74	1	-6.2233
chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-3.8994
chr2	166890502	166890561	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	chr7	51505507	51505568	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	2	-5.4765
chr9	15123930	15123963	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	NonProperStrand	100	chr5	31190509	31190546	tRNA	tRNA109-TyrGTA	.	100421	ProperStrand	64	2	-18.6018
chr13	109177094	109177184	protein_coding	Depdc1b	exon	ENSMUSG00000021697	NonProperStrand	3	chr16	23110964	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	NonProperStrand	93	1	-18.8822
chr11	3426352	3426368	protein_coding	Smtn	exon	ENSMUSG00000020439	ProperStrand	222	chr14	15572355	15572371	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	1	-8.6636
chr11	78828626	78828681	protein_coding	Ksr1	utr3	ENSMUSG00000018334	ProperStrand	12	chr8	13175022	13175051	protein_coding	Lamp1	utr3	ENSMUSG00000031447	ProperStrand	92	1	-15.7272
chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr16	13437460	13437489	tRNA	tRNA50-ThrCGT	.	9473	ProperStrand	7	1	-7.4403
chr13	6587842	6597137	protein_coding	Pfkp	exon	ENSMUSG00000021196	ProperStrand	197	chr8	128271916	128271996	protein_coding	Ntpcr	utr3	ENSMUSG00000031851	ProperStrand	7	1	-15.3495
chr17	36003354	36003371	antisense	5530401N12Rik	.	ENSMUSG00000087443	ProperStrand	8	chr16	23110964	23111000	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.2180
chr15	36535673	36538126	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr13	55067638	55067655	protein_coding	Unc5a	intron	ENSMUSG00000025876	NonProperStrand	96	1	-6.9475
chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	chr18	70728114	70728133	protein_coding	Mbd2	utr5	ENSMUSG00000024513	NonProperStrand	13	1	-12.9892
chr4	140549926	140550275	protein_coding	Atp13a2	exon	ENSMUSG00000036622	ProperStrand	39	chr11	69483136	69483209	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	8	-19.7250
chr19	4149781	4149799	protein_coding	Coro1b	intron	ENSMUSG00000024835	NonProperStrand	1	chr12	66193450	66194670	protein_coding	Fancm	utr5	ENSMUSG00000055884	ProperStrand	16	1	-inf
chr5	111356841	111356931	lincRNA	Ttc28	intron	ENSMUSG00000033209	NonProperStrand	36	chr5	73884020	73884100	protein_coding	Dcun1d4	utr5	ENSMUSG00000051674	NonProperStrand	5	1	-18.7969
chr12	99497602	99497618	protein_coding	Galc	utr5	ENSMUSG00000021003	NonProperStrand	65	chr17	24857716	24857775	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.1639
chr4	43505782	43505872	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr16	91630363	91630425	protein_coding	Gart	exon	ENSMUSG00000022962	ProperStrand	200	6	-8.6613
chr11	23029446	23029536	LTR	MTA_Mm	MaLR	chr11MTA_Mm23029376	NonProperStrand	1	chr13	101470663	101470743	protein_coding	Cdk7	utr3	ENSMUSG00000069089	ProperStrand	12	1	-inf
chr6	72584210	72598796	protein_coding	Tcf7l1	exon	ENSMUSG00000055799	ProperStrand	61	chr7	29136525	29136598	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-4.1557
chr7	134007851	134007918	protein_coding	Hirip3	exon	ENSMUSG00000042606	ProperStrand	28	chr17	26360446	26360536	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	1	-11.5692
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr12	55797769	55797859	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	6	-inf
chr4	74843493	74843509	LINE	Lx9	L1	chr4Lx974843264	NonProperStrand	30	chr11	106362302	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-7.2197
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr17	24857719	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-0.9329
chr5	89383967	89457318	protein_coding	Slc4a4	exon	ENSMUSG00000060961	NonProperStrand	195	chr14	76247711	76247778	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-2.0759
chrX	43287139	43287157	LTR	MLT-int	MaLR	chrXMLT-int43286965	NonProperStrand	1	chr4	131865855	131865896	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr1	129472758	129472777	protein_coding	Tmem163	intron	ENSMUSG00000026347	NonProperStrand	6	chr7	116663649	116663758	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-16.6661
chr2	90235314	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr12	60235067	60235154	snoRNA	ENSMUSG00000077505_SNORA26	.	ENSMUSG00000077505	ProperStrand	82	1	-3.8722
chr5	34112034	34112050	protein_coding	Letm1	exon	ENSMUSG00000005299	NonProperStrand	145	chr8	73419730	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-1.6541
chr6	93127321	93127338	lincRNA	9530026P05Rik	intron	ENSMUSG00000087573	ProperStrand	51	chr7	51751633	51751649	protein_coding	2310044H10Rik	exon	ENSMUSG00000008140	ProperStrand	14	1	-16.6867
chr19	29205161	29205261	protein_coding	Rcl1	exon	ENSMUSG00000024785	ProperStrand	14	chr7	117166788	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-7.7158
chr14	70205072	70205162	protein_coding	Rhobtb2	utr5	ENSMUSG00000022075	NonProperStrand	2	chr18	35716828	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	NonProperStrand	45	1	-19.7664
chr8	89148291	89148371	protein_coding	Lonp2	intron	ENSMUSG00000047866	ProperStrand	13	chr19	9043974	9044401	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	1	-12.5797
chr4	98601107	98601187	protein_coding	Usp1	exon	ENSMUSG00000028560	ProperStrand	11	chr8	74117990	74118080	protein_coding	Pgls	exon	ENSMUSG00000031807	ProperStrand	8	1	-19.0255
chr11	6428035	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr6	131330315	131330414	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	ProperStrand	408	2	-0.9911
chr11	5180669	5180685	protein_coding	Znrf3	utr3	ENSMUSG00000041961	NonProperStrand	210	chr15	79913318	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-2.7755
chr1	88423323	88423411	protein_coding	Ptma	utr5	ENSMUSG00000026238	ProperStrand	385	chr6	128010927	128010944	protein_coding	Tspan9	intron	ENSMUSG00000030352	ProperStrand	67	1	-9.3683
chr7	134943414	134943494	protein_coding	Setd1a	utr3	ENSMUSG00000042308	ProperStrand	58	chr9	120039532	120039622	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.3806
chr1	93320500	93320517	protein_coding	Per2	exon	ENSMUSG00000055866	NonProperStrand	44	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	2	-9.4780
chr8	107071834	107071853	protein_coding-noncoding	Car7	utr5	ENSMUSG00000031883	ProperStrand	1	chr17	13184992	13185015	protein_coding	Wtap	utr5	ENSMUSG00000060475	ProperStrand	119	1	-inf
chr7	116663633	116663733	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	chrX	54644627	54644649	snoRNA	ENSMUSG00000065110_Snord61	.	ENSMUSG00000065110	ProperStrand	40	2	-5.5563
chr18	25780123	25780140	protein_coding	Celf4	intron	ENSMUSG00000024268	ProperStrand	21	chr17	27771050	27771096	protein_coding	Rps10	exon	ENSMUSG00000052146	ProperStrand	94	1	-14.5342
chr11	115664137	115664352	protein_coding	Caskin2	exon	ENSMUSG00000034471	ProperStrand	17	chr7	118219590	118219616	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	3	-15.3190
chr11	69555927	69555970	protein_coding	Polr2a	exon	ENSMUSG00000005198	ProperStrand	200	chr4	131908689	131908795	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-1.2267
chr19	59064715	59064732	protein_coding	4930506M07Rik	exon	ENSMUSG00000041362	ProperStrand	36	chr11	77996560	77996609	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-7.1066
chr10	119831334	119831355	protein_coding	Hmga2	intron	ENSMUSG00000056758	NonProperStrand	6	chr16	23110875	23110938	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-10.1290
chr11	115650650	115650958	protein_coding	2310067B10Rik	exon	ENSMUSG00000020747	ProperStrand	74	chr8	23371351	23371367	protein_coding	Thsd1	utr3	ENSMUSG00000031480	ProperStrand	2	1	-inf
chr17	34808913	34808930	protein_coding	Tnxb	exon	ENSMUSG00000033327	ProperStrand	36	chr11	62416601	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-6.1698
chr4	151704124	151704182	protein_coding	Rpl22	exon	ENSMUSG00000028936	ProperStrand	112	chr9	44307596	44307613	protein_coding	Bcl9l	utr5	ENSMUSG00000063382	ProperStrand	12	1	-15.3458
chr17	43766565	43766581	protein_coding	Tdrd6	exon	ENSMUSG00000040140	NonProperStrand	15	chr4	131865867	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.2332
chr4	46618653	46618743	protein_coding	Tbc1d2	exon	ENSMUSG00000039813	ProperStrand	12	chr18	35716764	35716844	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-5.1577
chr16	23111373	23111505	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	chr1	59761635	59761716	snoRNA	ENSMUSG00000089093_Snord11	.	ENSMUSG00000089093	ProperStrand	193	5	-2.0707
chr7	108971290	108971306	protein_coding	Inppl1	utr3	ENSMUSG00000032737	ProperStrand	272	chr2	130101972	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	2	-4.4777
chr9	122965553	122965570	protein_coding	Tgm4	exon	ENSMUSG00000025787	NonProperStrand	11	chr1	59761145	59761181	snoRNA	ENSMUSG00000089512_SNORD11	.	ENSMUSG00000089512	ProperStrand	43	2	-inf
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr15	78982035	78982051	protein_coding	Polr2f	exon	ENSMUSG00000033020	NonProperStrand	71	1	-8.5673
chr19	4037613	4037880	protein_coding	Gstp1	utr5	ENSMUSG00000060803	ProperStrand	9	chr1	162967511	162967566	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-11.7571
chr8	114234630	114234720	protein_coding	Bcar1	utr3	ENSMUSG00000031955	ProperStrand	44	chr11	97642994	97643074	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.0151
chr10	113128614	113128631	DNA	MER20B	MER1_type	chr10MER20B113128556	ProperStrand	1	chr1	37543585	37543602	protein_coding	Mgat4a	intron	ENSMUSG00000026110	NonProperStrand	12	1	-inf
chr7	13613019	13613088	protein_coding	Trim28	exon	ENSMUSG00000005566	ProperStrand	296	chr7	52381972	52382011	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	2	-6.1528
chr17	39985198	39985297	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr11	77995191	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	4	-1.9920
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr10	63552101	63552119	protein_coding	Lrrtm3	exon	ENSMUSG00000042846	ProperStrand	63	1	-7.6978
chr11	115451723	115451739	protein_coding	Gga3	exon	ENSMUSG00000020740	NonProperStrand	50	chr11	106362639	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-7.7686
chr7	28146782	28146798	protein_coding	Spnb4	exon	ENSMUSG00000011751	NonProperStrand	84	chr7	35983752	35983768	protein_coding	Slc7a10	exon	ENSMUSG00000030495	NonProperStrand	33	1	-13.8479
chr4	118781440	118781563	protein_coding	Slc2a1	utr5	ENSMUSG00000028645	ProperStrand	361	chr9	106331954	106332302	protein_coding	Rpl29	utr5	ENSMUSG00000048758	ProperStrand	45	2	-16.2314
chr13	53073980	53073997	protein_coding	Nfil3	intron	ENSMUSG00000056749	NonProperStrand	66	chr10	23505155	23505222	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.1060
chr15	99070172	99070188	protein_coding	Kcnh3	exon	ENSMUSG00000037579	NonProperStrand	44	chr17	35089181	35089232	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-6.0949
chr9	57253860	57253877	SINE	B1_Mm	Alu	chr9B1_Mm57253847	ProperStrand	39	chr7	133631860	133631924	protein_coding	Tufm	exon	ENSMUSG00000073838	ProperStrand	28	1	-15.7049
chr7	117166721	117166760	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	chr14	76372292	76372410	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	1	-1.1288
chr1	93762629	93762648	LTR	MT2A	ERVL	chr1MT2A93762449	NonProperStrand	1	chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	1	-inf
chr9	65681107	65681161	protein_coding	Trip4	utr3	ENSMUSG00000032386	ProperStrand	6	chr10	110918639	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-8.0545
chr3	126436336	126436353	protein_coding	Camk2d	intron	ENSMUSG00000053819	NonProperStrand	20	chr5	121655126	121655154	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.8755
chr19	31157628	31157644	protein_coding	Cstf2t	exon	ENSMUSG00000053536	ProperStrand	48	chr5	108334206	108334250	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-5.2528
chr10	75322172	75322841	protein_coding	Mif	utr3	ENSMUSG00000033307	ProperStrand	146	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	2	-11.5646
chr5	139919594	139919659	snRNA	ENSMUSG00000065300_U6	.	ENSMUSG00000065300	ProperStrand	2	chr16	23110901	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-inf
mmu-miR-6240	3	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr11	115709647	115710896	protein_coding	Llgl2	exon	ENSMUSG00000020782	ProperStrand	62	3	-13.4949
chr14	67537512	67537530	protein_coding	Pnma2	utr3	ENSMUSG00000046204	NonProperStrand	16	chr16	23110454	23110517	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.9207
chr8	87251041	87251057	protein_coding	Nfix	exon	ENSMUSG00000001911	ProperStrand	12	chr11	6519871	6519944	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-11.2172
chr6	23576077	23576099	protein_coding	Cadps2	intron	ENSMUSG00000017978	NonProperStrand	8	chr10	39978368	39978484	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-9.5507
chr17	10409121	10409139	protein_coding	Qk	exon	ENSMUSG00000062078	ProperStrand	63	chr11	69481335	69481423	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.1125
chr1	136371961	136372055	protein_coding-noncoding	Klhl12	utr5	ENSMUSG00000026455	ProperStrand	1	chr5	130295525	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-inf
chr17	95160909	95218242	protein_coding	2610044O15Rik	exon	ENSMUSG00000066057	NonProperStrand	70	chr5	130295428	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	6	-19.8373
chr4	43505774	43505864	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr19	5493614	5493697	protein_coding	Cfl1	utr3	ENSMUSG00000056201	ProperStrand	88	1	-2.4020
chr8	123278923	123278942	protein_coding	Irf8	exon	ENSMUSG00000041515	NonProperStrand	7	chr4	131908689	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.0493
chr9	79618217	79618307	protein_coding	Tmem30a	utr3	ENSMUSG00000032328	ProperStrand	90	chr3	123210891	123210971	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.4424
chr1	180266059	180266179	protein_coding	Hnrnpu	exon	ENSMUSG00000039630	ProperStrand	286	chr12	60141396	60141509	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	5	-15.7454
chr4	108534097	108534142	protein_coding	Txndc12	utr3	ENSMUSG00000028567	ProperStrand	23	chr11	50071440	50071478	protein_coding	Maml1	exon	ENSMUSG00000050567	ProperStrand	29	1	-16.7338
chr13	104564273	104564363	protein_coding	Srek1	intron	ENSMUSG00000032621	ProperStrand	41	chr19	8963097	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	18	-inf
chr5	74489312	74489330	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr3	95433546	95433605	protein_coding	Ensa	utr3	ENSMUSG00000038619	ProperStrand	4	1	-11.2543
chr11	21459850	21462939	protein_coding	Mdh1	exon	ENSMUSG00000020321	ProperStrand	16	chr4	130305566	130305620	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	1	-12.5961
chr13	113732034	113734795	protein_coding	Dhx29	exon	ENSMUSG00000042426	ProperStrand	15	chr2	158182156	158182200	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-7.7668
chr2	25297885	25298207	protein_coding	Abca2	exon	ENSMUSG00000026944	ProperStrand	57	chr16	87419212	87419253	snoRNA	ENSMUSG00000065647_SNORA2	.	ENSMUSG00000065647	ProperStrand	123	1	-11.9753
chr1	36881662	36882143	protein_coding	Tmem131	exon	ENSMUSG00000026116	ProperStrand	129	chr17	35299556	35299636	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-3.3403
chr13	58293485	58293515	protein_coding	Ubqln1	exon	ENSMUSG00000005312	ProperStrand	49	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-3.9702
chr4	140121137	140121153	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	chr16	32376060	32379902	protein_coding	Ubxn7	intron	ENSMUSG00000053774	ProperStrand	30	2	-20.4201
chr15	79118119	79118147	protein_coding	Pla2g6	exon	ENSMUSG00000042632	ProperStrand	32	chr10	110918552	110918642	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	6	-20.3264
chr7	71522184	71522245	protein_coding	Mphosph10	exon	ENSMUSG00000030521	ProperStrand	6	chr7	116664809	116664899	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-16.7110
chr11	72606696	72606747	protein_coding-noncoding	Cyb5d2	utr3	ENSMUSG00000057778	ProperStrand	5	chr15	34370584	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	5	-inf
chr8	34729594	34729684	protein_coding	Ppp2cb	utr3	ENSMUSG00000009630	ProperStrand	14	chr16	23110911	23110991	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.2008
chr19	59064715	59064732	protein_coding	4930506M07Rik	exon	ENSMUSG00000041362	ProperStrand	36	chr17	3187647	3187663	protein_coding	Scaf8	exon	ENSMUSG00000046201	ProperStrand	126	1	-12.8557
chr8	107783510	107783527	protein_coding	Tradd	exon	ENSMUSG00000031887	ProperStrand	23	chr19	8798740	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	3	-15.3283
chr7	52382237	52382315	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	chr11	77996560	77996611	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	6	-10.3745
chr8	91106344	91106360	protein_coding	Nkd1	intron	ENSMUSG00000031661	ProperStrand	57	chr4	131865855	131865926	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-3.3818
chr5	42136455	42136473	Low_complexity	GA-rich	Low_complexity	chr5GA-rich42136449	NonProperStrand	106	chr7	88489430	88489446	protein_coding	Rps17	intron	ENSMUSG00000061787	ProperStrand	105	1	-11.0457
chr16	37384897	37384913	protein_coding	Stxbp5l	utr5	ENSMUSG00000022829	ProperStrand	332	chr6	87882750	87882798	protein_coding	8430410A17Rik	intron	ENSMUSG00000030060	ProperStrand	22	1	-11.9172
chr19	39917317	39917333	protein_coding	Cyp2c69	utr3	ENSMUSG00000092008	NonProperStrand	83	chr3	123210926	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.5608
chr2	130109497	130109513	protein_coding	Idh3b	exon	ENSMUSG00000027406	ProperStrand	146	chr11	62416604	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-3.4829
chr18	73693110	73693139	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr11	74718963	74719009	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	1	-1.6727
chr3	85944541	85944562	snoRNA	ENSMUSG00000064390_Rnu73b	.	ENSMUSG00000064390	ProperStrand	164	chr4	131866642	131866676	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	1	-7.1006
chrX	34667269	34667285	protein_coding	Nkap	exon	ENSMUSG00000016409	NonProperStrand	133	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	2	-9.9921
chr17	47928468	47928485	protein_coding	Tfeb	exon	ENSMUSG00000023990	ProperStrand	78	chr19	8800423	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-3.0532
chr14	45949538	45949554	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	chr9	78326601	78327682	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	2	-5.3466
chr13	23662817	23662897	protein_coding	Hist1h2ae	exon	ENSMUSG00000069272	ProperStrand	51	chr3	68889026	68889116	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-3.5547
chr10	80543338	80543799	protein_coding	Thop1	exon	ENSMUSG00000004929	ProperStrand	20	chr7	11073005	11073037	protein_coding	Zik1	utr3	ENSMUSG00000030393	ProperStrand	11	1	-18.9447
chr2	24915691	24915707	protein_coding	Nelf	exon	ENSMUSG00000006476	ProperStrand	40	chr8	122490893	122490911	protein_coding	Gm20388	intron	ENSMUSG00000092329	NonProperStrand	203	1	-11.6865
chr15	75897302	75897588	protein_coding	Scrib	exon	ENSMUSG00000022568	ProperStrand	154	chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-4.0283
chr2	130102088	130102109	protein_coding-noncoding	Nop56	utr5	ENSMUSG00000027405	ProperStrand	19	chr2	53952837	53952915	snoRNA	ENSMUSG00000064596_SNORA51	.	ENSMUSG00000064596	ProperStrand	1	1	-inf
chr9	121657848	121657938	protein_coding	Nktr	exon	ENSMUSG00000032525	ProperStrand	41	chr17	24857718	24857798	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	3	-7.6121
chr2	90235285	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	5	-5.7425
chr3	87331855	87331922	protein_coding	Etv3	exon	ENSMUSG00000003382	ProperStrand	7	chr10	20043259	20043301	protein_coding	Bclaf1	exon	ENSMUSG00000037608	ProperStrand	83	1	-17.0448
chr12	33638594	33638614	lincRNA	4933406C10Rik	exon	ENSMUSG00000086543	ProperStrand	52	chr8	12818610	12818627	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-8.8801
chr8	49300238	49300257	DNA	MER53	hAT	chr8MER5349300184	ProperStrand	1	chr11	69483212	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-inf
chr5	149317028	149317128	protein_coding	Ubl3	utr3	ENSMUSG00000001687	ProperStrand	6	chr7	90799835	90799853	protein_coding	Il16	intron	ENSMUSG00000001741	ProperStrand	4	1	-19.3129
chr9	15117255	15118696	protein_coding	Taf1d	utr3	ENSMUSG00000031939	ProperStrand	363	chr11	6519850	6519930	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-4.4189
chr5	87680856	87680872	protein_coding	Ugt2b37	exon	ENSMUSG00000057425	NonProperStrand	30	chr4	131865855	131865879	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.9337
chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	chr16	23111705	23111818	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-1.3742
chr6	113441958	113442141	protein_coding	Creld1	exon	ENSMUSG00000030284	ProperStrand	4	chr17	24857817	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-7.6570
chr4	148930398	148930426	protein_coding	Ctnnbip1	intron	ENSMUSG00000028988	ProperStrand	10	chr11	69481387	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	5	-inf
chr19	29887186	29887232	protein_coding	Ranbp6	exon	ENSMUSG00000074909	ProperStrand	2	chr15	5068408	5068479	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-13.5040
chr18	10052128	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr2	129998663	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	1	-3.7248
chr9	15118287	15118371	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	chr14	63287588	63287610	snoRNA	ENSMUSG00000089531_SNORA73	.	ENSMUSG00000089531	ProperStrand	123	1	-2.2084
chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	chr11	48616641	48616706	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	1	-4.6972
chr2	128955938	128955959	protein_coding	Chchd5	exon	ENSMUSG00000037938	ProperStrand	4	chr9	120037991	120038055	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-10.3050
chr4	58083061	58083077	protein_coding	Svep1	exon	ENSMUSG00000028369	ProperStrand	54	chr7	150717306	150717425	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	9	-19.9105
chr3	89761777	89761904	protein_coding	Atp8b2	exon	ENSMUSG00000060671	ProperStrand	140	chr2	26493366	26493465	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-2.2420
chr2	179910359	179910459	protein_coding	Adrm1	exon	ENSMUSG00000039041	ProperStrand	27	chr1	162965994	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	4	-16.0894
mmu-miR-6240	1	18	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr18	36961576	36961661	misc_RNA	Vault	.	ENSMUSG00000065145	ProperStrand	177	3	-9.3511
chr9	40612121	40612164	snoRNA	ENSMUSG00000075924_Snord14d	.	ENSMUSG00000075924	ProperStrand	131	chr10	110918647	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	3	-5.6907
chr9	6207115	6207133	protein_coding	Pdgfd	intron	ENSMUSG00000032006	NonProperStrand	4	chr4	116827119	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-12.7004
chr7	52309977	52309993	protein_coding	Prrg2	exon	ENSMUSG00000007837	NonProperStrand	281	chr8	9976060	9976096	protein_coding	Lig4	utr5	ENSMUSG00000049717	ProperStrand	14	1	-13.1838
chr11	68936358	68936374	protein_coding	Hes7	exon	ENSMUSG00000023781	NonProperStrand	66	chr7	117189976	117190056	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.1595
chr10	75359822	75360194	protein_coding	Smarcb1	exon	ENSMUSG00000000902	ProperStrand	109	chr17	43176961	43177017	protein_coding	Tnfrsf21	exon	ENSMUSG00000023915	ProperStrand	36	1	-13.1457
chrX	156565616	156566442	protein_coding	Pdha1	exon	ENSMUSG00000031299	ProperStrand	27	chr11	69481399	69481479	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-4.7037
chr1	88249837	88250369	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chr2	127166921	127166939	protein_coding	Astl	intron	ENSMUSG00000050468	ProperStrand	4	4	-inf
chr11	115999916	115999932	protein_coding	Mrpl38	exon	ENSMUSG00000020775	NonProperStrand	65	chr19	8799581	8799601	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-6.6080
chrX	152009278	152009294	protein_coding	Ptchd1	exon	ENSMUSG00000041552	NonProperStrand	294	chr2	130103751	130103808	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-5.3333
chr7	147125630	147125717	protein_coding	Kndc1	exon	ENSMUSG00000066129	ProperStrand	15	chr9	64022854	64022922	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-10.8370
chr1	71341491	71341507	protein_coding	Abca12	exon	ENSMUSG00000050296	NonProperStrand	143	chr5	108336363	108336408	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-3.2515
chr12	7494258	7494274	SINE	B4A	B4	chr12B4A7494223	ProperStrand	15	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-8.6280
chr2	31536753	31536790	protein_coding	Exosc2	utr3	ENSMUSG00000039356	ProperStrand	39	chr5	74489640	74489678	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-4.5953
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr9	31213213	31216889	protein_coding	Nfrkb	exon	ENSMUSG00000042185	ProperStrand	34	1	-8.0605
chr1	62862309	62862358	protein_coding	Nrp2	utr3	ENSMUSG00000025969	ProperStrand	35	chr16	23110882	23110972	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-2.9161
chr19	4156997	4157014	protein_coding	Rps6kb2	utr3	ENSMUSG00000024830	ProperStrand	6	chr4	151706700	151706759	protein_coding	Rpl22	utr3	ENSMUSG00000028936	ProperStrand	112	1	-16.8013
chr14	66016118	66016135	protein_coding	Zfp395	utr3	ENSMUSG00000034522	ProperStrand	15	chr4	116827794	116827892	snoRNA	ENSMUSG00000064751_SNORD46	.	ENSMUSG00000064751	ProperStrand	132	1	-14.5506
chr11	86940799	86940817	protein_coding	Trim37	utr5	ENSMUSG00000018548	ProperStrand	17	chr11	59317753	59319402	protein_coding	Zkscan17	utr5	ENSMUSG00000020472	ProperStrand	23	1	-17.6220
chr6	51416194	51416359	protein_coding	Hnrnpa2b1	exon	ENSMUSG00000004980	ProperStrand	166	chr17	71990958	71990999	snoRNA	ENSMUSG00000092713_CT010429.1	.	ENSMUSG00000092713	ProperStrand	182	1	-9.0477
chr16	5100103	5100119	protein_coding	Ppl	exon	ENSMUSG00000039457	ProperStrand	37	chrX	34622992	34623024	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-4.0674
chr11	109334503	109334551	protein_coding	Slc16a6	utr5	ENSMUSG00000041920	ProperStrand	15	chr4	116862617	116862662	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	3	-19.5756
chr15	81734391	81735237	protein_coding	Aco2	exon	ENSMUSG00000022477	ProperStrand	237	chr4	131866155	131866235	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-2.5845
chr2	90235296	90235326	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr3	67277001	67277018	protein_coding	Gfm1	intron	ENSMUSG00000027774	ProperStrand	31	1	-5.7479
chr4	122966315	122969049	protein_coding	Pabpc4	exon	ENSMUSG00000011257	ProperStrand	85	chr16	23110842	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-1.9884
chr13	51743627	51743703	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	chr13	49779667	49779742	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	2	-2.3052
chr7	25774938	25775408	protein_coding	Atp1a3	exon	ENSMUSG00000040907	ProperStrand	66	chr4	131866154	131866244	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-3.4891
chr11	74721428	74721459	protein_coding	Tsr1	exon	ENSMUSG00000038335	ProperStrand	48	chr16	23111467	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.5796
chr11	98885022	98885052	protein_coding	Top2a	intron	ENSMUSG00000020914	ProperStrand	324	chr5	110533037	110533123	protein_coding	Gtpbp6	utr3	ENSMUSG00000033434	ProperStrand	9	1	-13.8245
chr18	9995316	9995333	protein_coding	Thoc1	utr3	ENSMUSG00000024287	ProperStrand	13	chr11	69481348	69481448	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-6.1585
chr8	32239595	32239611	protein_coding	Rnf122	utr3	ENSMUSG00000039328	NonProperStrand	42	chr12	55797769	55797839	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	7	-inf
chr5	136597972	136598024	protein_coding	Polr2j	exon	ENSMUSG00000039771	ProperStrand	3	chr10	23505151	23505204	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-6.9610
chr2	4829164	4829180	protein_coding	Sephs1	utr3	ENSMUSG00000026662	NonProperStrand	271	chr2	32818886	32818934	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-2.6608
chr2	30199058	30199084	protein_coding	Nup188	exon	ENSMUSG00000052533	ProperStrand	96	chr10	23505151	23505237	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-2.3647
chr8	124405725	124405775	protein_coding	Slc7a5	utr3	ENSMUSG00000040010	ProperStrand	166	chr19	48699351	48699370	protein_coding	Sorcs3	intron	ENSMUSG00000063434	ProperStrand	16	1	-13.9620
chr8	126017765	126018735	protein_coding	Afg3l1	exon	ENSMUSG00000031967	ProperStrand	29	chr1	162967504	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.8538
chr4	129735708	129735805	protein_coding	Col16a1	exon	ENSMUSG00000040690	NonProperStrand	4	chr7	29136525	29136598	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-7.7378
chr17	66469395	66469412	protein_coding	ORF19	utr3	ENSMUSG00000024101	ProperStrand	337	chr18	24646407	24646443	protein_coding	Rprd1a	utr3	ENSMUSG00000040446	ProperStrand	21	1	-11.9826
chr14	17075140	17075185	protein_coding	Oxsm	exon	ENSMUSG00000021786	ProperStrand	15	chr7	29136553	29136586	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.9384
chrX	35917189	35917228	protein_coding	Cul4b	utr5	ENSMUSG00000031095	ProperStrand	31	chr18	35716850	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.3259
chr12	9010902	9010932	protein_coding	Wdr35	exon	ENSMUSG00000066643	ProperStrand	10	chr7	29136550	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.7572
chr17	21102077	21102133	protein_coding	Ppp2r1a	intron	ENSMUSG00000007564	ProperStrand	57	chr2	91436277	91436312	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-7.5997
chr18	34789215	34789689	protein_coding	Kif20a	exon	ENSMUSG00000003779	ProperStrand	50	chr16	38158126	38158226	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	7	-19.6586
chr8	72287172	72287188	protein_coding	Zfp866	utr3	ENSMUSG00000043090	NonProperStrand	134	chr16	23111735	23111837	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-2.6939
chr2	72322667	72322785	protein_coding	Cdca7	exon	ENSMUSG00000055612	ProperStrand	22	chr16	23110828	23110858	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.4786
chr9	120859321	120859709	protein_coding	Ctnnb1	exon	ENSMUSG00000006932	ProperStrand	214	chr2	26494708	26494772	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.0889
chr16	75761550	75765200	protein_coding	Hspa13	exon	ENSMUSG00000032932	NonProperStrand	57	chr17	24665435	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	3	-11.8803
chr15	81978128	81978236	protein_coding	Srebf2	intron	ENSMUSG00000022463	ProperStrand	592	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-2.5936
chr14	31826494	31826510	protein_coding	Gnl3	exon	ENSMUSG00000042354	NonProperStrand	59	chr2	89368462	89368479	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	1	-10.3922
chr7	52309977	52309993	protein_coding	Prrg2	exon	ENSMUSG00000007837	NonProperStrand	281	chr11	106362313	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-2.9310
chr6	4704501	4704604	protein_coding	Peg10	exon	ENSMUSG00000092035	ProperStrand	102	chr8	73419657	73419682	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.2112
chr6	50128495	50130235	protein_coding	Mpp6	exon	ENSMUSG00000038388	ProperStrand	6	chr15	34370574	34370664	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-8.1636
chr10	23505152	23505197	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	chr7	127979054	127979074	tRNA	tRNA861-LeuTAG	.	352640	ProperStrand	49	1	-1.5211
chr8	86096145	86096302	protein_coding	Tecr	exon	ENSMUSG00000031708	ProperStrand	100	chr3	102858729	102859334	protein_coding	Csde1	exon	ENSMUSG00000068823	ProperStrand	122	1	-10.8620
chr11	120432841	120432941	protein_coding	P4hb	exon	ENSMUSG00000025130	ProperStrand	83	chr15	71624757	71624797	snoRNA	ENSMUSG00000088895_SNORA81	.	ENSMUSG00000088895	ProperStrand	348	1	-9.1405
chr11	69870769	69870785	protein_coding	Asgr1	exon	ENSMUSG00000020884	NonProperStrand	145	chr4	131429621	131429679	protein_coding	Srsf4	utr5	ENSMUSG00000028911	ProperStrand	101	1	-10.4961
chr5	37187159	37187472	protein_coding	Mrfap1	utr3	ENSMUSG00000055302	ProperStrand	62	chr7	117189961	117190051	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.2727
chr10	23441596	23441686	LINE	Lx7	L1	chr10Lx723441268	NonProperStrand	1	chr10	23442135	23442225	LTR	RMER13B	ERVK	chr10RMER13B23441967	NonProperStrand	1	1	-inf
chr12	87088323	87088400	protein_coding	Mfsd7c	exon	ENSMUSG00000034258	ProperStrand	10	chr4	131865855	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	7	-inf
chr8	93558105	93558132	protein_coding	Chd9	exon	ENSMUSG00000056608	ProperStrand	35	chr11	69481333	69481417	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-7.0552
chr4	74926519	74926570	snoRNA	ENSMUSG00000065884_SNORA63	.	ENSMUSG00000065884	ProperStrand	12	chr13	75905592	75905651	snoRNA	ENSMUSG00000077449_SNORA42	.	ENSMUSG00000077449	ProperStrand	26	1	-17.9842
chr7	17015052	17015152	protein_coding	Zc3h4	exon	ENSMUSG00000059273	ProperStrand	95	chr18	35102298	35102326	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-5.6855
chr14	78912381	78912458	protein_coding	Akap11	exon	ENSMUSG00000022016	ProperStrand	44	chr9	15119646	15119736	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.1801
chr15	79990588	79990684	protein_coding	Tab1	exon	ENSMUSG00000022414	ProperStrand	11	chr2	26768393	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-9.0246
chr5	101235493	101235835	protein_coding	Fam175a	exon	ENSMUSG00000035234	ProperStrand	6	chr16	23110916	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-10.1290
chr14	79027494	79027584	protein_coding	Dgkh	exon	ENSMUSG00000034731	ProperStrand	29	chr7	29136543	29136623	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.6651
chr15	58781043	58781143	protein_coding	Mtss1	intron	ENSMUSG00000022353	ProperStrand	68	chr2	26494708	26494759	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.8837
chr3	52388277	52388294	SINE	B4A	B4	chr3B4A52388218	ProperStrand	169	chr17	23955819	23955836	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	1	-9.3981
chr4	143027927	143028559	protein_coding	Oog4	exon	ENSMUSG00000047799	NonProperStrand	99	chr19	8799582	8799600	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-5.7796
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr15	79399087	79399104	protein_coding	Dmc1	exon	ENSMUSG00000022429	ProperStrand	8	1	-12.8500
chr10	119286688	119286704	protein_coding	Grip1	intron	ENSMUSG00000034813	ProperStrand	38	chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	1	-9.0267
chr19	8963025	8963125	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	chr1	145626056	145626194	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	10	-4.1861
chr2	89877648	89877664	protein_coding	Olfr1265	exon	ENSMUSG00000059910	NonProperStrand	4	chr4	131865867	131865901	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.0048
chr7	148636981	148637210	protein_coding	Rplp2	utr3	ENSMUSG00000025508	ProperStrand	106	chr9	105808451	105813000	protein_coding	Col6a5	exon	ENSMUSG00000091345	ProperStrand	8	1	-16.2821
chr17	45704047	45704063	protein_coding	Slc35b2	exon	ENSMUSG00000037089	NonProperStrand	9	chr17	6945848	6945898	protein_coding	Ezr	exon	ENSMUSG00000052397	ProperStrand	126	1	-15.6833
chr4	115243472	115243576	protein_coding	Cyp4a31	exon	ENSMUSG00000028712	ProperStrand	61	chr10	126952476	126953330	protein_coding	Ndufa4l2	exon	ENSMUSG00000040280	ProperStrand	18	1	-15.6847
chr4	131908356	131908477	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr5	121267633	121267650	protein_coding	Oas1b	exon	ENSMUSG00000029605	NonProperStrand	4	1	-12.9209
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr2	138188029	138188045	protein_coding	Btbd3	intron	ENSMUSG00000062098	NonProperStrand	121	1	-7.1948
chr8	113527676	113527766	protein_coding	Ddx19b	utr3	ENSMUSG00000033658	ProperStrand	30	chr9	15119639	15119728	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	8	-inf
chr6	70805499	70805577	snoRNA	ENSMUSG00000065750_SNORA5	.	ENSMUSG00000065750	ProperStrand	165	chr15	34370545	34370645	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-3.3058
chr7	129072784	129074102	protein_coding	Cog7	exon	ENSMUSG00000034951	ProperStrand	29	chr1	63225606	63225686	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	2	-12.9850
chr10	127981627	127981646	protein_coding	Zc3h10	exon	ENSMUSG00000039810	ProperStrand	9	chr2	130101974	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	3	-18.7305
chr10	80641696	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	chr5	121655029	121655129	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	4	-0.8764
chr2	90235304	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	89105750	89105766	protein_coding	Chrng	exon	ENSMUSG00000026253	NonProperStrand	130	1	-3.0301
chr17	24859074	24859128	protein_coding	Ndufb10	exon	ENSMUSG00000040048	ProperStrand	6	chr8	13876156	13876226	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	3	-18.6691
chr11	6428034	6428098	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr7	106628072	106628172	snoRNA	ENSMUSG00000064966_Snord15b	.	ENSMUSG00000064966	ProperStrand	74	1	-2.8180
chr2	132687002	132688115	protein_coding	Crls1	exon	ENSMUSG00000027357	ProperStrand	5	chr8	125418803	125418819	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	4	-19.7602
chr2	120359522	120359610	protein_coding	Zfp106	exon	ENSMUSG00000027288	ProperStrand	199	chr7	116663634	116663725	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	7	-8.4951
chr8	87388358	87391282	protein_coding	Farsa	exon	ENSMUSG00000003808	ProperStrand	21	chr15	98356840	98356885	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	1	-9.8725
chr17	4082607	4082707	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	1	-7.1426
chr18	42498791	42499225	protein_coding	Rbm27	utr3	ENSMUSG00000024491	ProperStrand	38	chr10	23505152	23505235	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-5.3708
chr17	57170739	57170805	protein_coding	Khsrp	exon	ENSMUSG00000007670	ProperStrand	353	chr7	30685349	30688926	protein_coding	Zfp27	utr5	ENSMUSG00000062040	ProperStrand	5	1	-14.9352
chr4	148703221	148703300	protein_coding	Ube4b	utr3	ENSMUSG00000028960	ProperStrand	66	chr8	32260335	32260363	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-4.4475
chr4	17134655	17134745	LTR	ETnERV2-int	ERVK	chr4ETnERV2-int17134672	ProperStrand	1	chr9	63032750	63032830	protein_coding	Map2k5	intron	ENSMUSG00000058444	NonProperStrand	79	1	-inf
chr7	151864566	151864584	protein_coding	Ano1	exon	ENSMUSG00000031075	ProperStrand	6	chr1	162965980	162965999	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-8.2222
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr7	123301033	123301380	protein_coding	Plekha7	exon	ENSMUSG00000045659	ProperStrand	66	1	-6.8382
chr4	41156441	41160876	protein_coding	Ubap2	exon	ENSMUSG00000028433	ProperStrand	292	chr2	130101986	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	2	-4.2887
chr12	87865704	87865722	SINE	RSINE1	B4	chr12RSINE187865630	ProperStrand	36	chrX	71517821	71517951	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-7.5639
chr19	6984447	6984464	protein_coding	Prdx5	utr5	ENSMUSG00000024953	ProperStrand	24	chr8	107165492	107165508	protein_coding	Fam96b	exon	ENSMUSG00000031879	ProperStrand	21	1	-17.2299
chr19	5801522	5801554	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr16	23113715	23113818	protein_coding	Eif4a2	utr3	ENSMUSG00000022884	ProperStrand	356	5	-16.5560
chrX	47988164	47988225	lincRNA	6720401G13Rik	exon	ENSMUSG00000085396	ProperStrand	34	chr15	103027212	103027233	protein_coding	Cbx5	utr3	ENSMUSG00000009575	ProperStrand	98	1	-13.4755
chr15	89200844	89201056	protein_coding	Ncaph2	exon	ENSMUSG00000008690	ProperStrand	65	chr17	35088957	35089000	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	5	-20.0422
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr16	16879445	16879504	protein_coding	Top3b	exon	ENSMUSG00000022779	ProperStrand	36	1	-9.6335
chr19	7037838	7037939	protein_coding	Plcb3	exon	ENSMUSG00000024960	ProperStrand	111	chr17	24857816	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.3433
chr6	113060503	113065665	protein_coding	Setd5	exon	ENSMUSG00000034269	ProperStrand	162	chr4	131865908	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-2.9502
chr10	110196815	110196832	protein_coding	E2f7	intron	ENSMUSG00000020185	ProperStrand	30	chr5	147646044	147646580	protein_coding	Rpl21	exon	ENSMUSG00000041453	ProperStrand	112	2	-21.5046
chr17	86087303	86087323	protein_coding	Six2	utr5	ENSMUSG00000024134	ProperStrand	3	chr13	94957641	94957657	protein_coding	Lhfpl2	intron	ENSMUSG00000045312	ProperStrand	37	1	-20.6471
chr14	33157682	33158090	protein_coding	Ogdhl	exon	ENSMUSG00000021913	ProperStrand	182	chr4	53873622	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	2	-11.0044
chr6	86474835	86475236	protein_coding	Pcbp1	exon	ENSMUSG00000051695	ProperStrand	108	chr16	23111392	23111482	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-2.0965
chr14	28297022	28297047	protein_coding	Ccdc66	exon	ENSMUSG00000046753	ProperStrand	4	chr16	23111375	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-10.7545
chr14	51427117	51427217	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chrX	135868779	135868820	protein_coding	Trap1a	exon	ENSMUSG00000051257	ProperStrand	66	1	-7.0197
chr11	6428089	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr11	77994800	77994819	snoRNA	ENSMUSG00000064540_Snord42a	.	ENSMUSG00000064540	ProperStrand	142	3	-4.9143
chr14	33006598	33007079	protein_coding	Timm23	exon	ENSMUSG00000013701	ProperStrand	24	chr10	80010603	80010633	protein_coding	Rexo1	exon	ENSMUSG00000047417	ProperStrand	46	2	-21.3235
chr2	138188029	138188045	protein_coding	Btbd3	intron	ENSMUSG00000062098	NonProperStrand	121	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.8133
chr10	112237052	112237070	LTR	RLTR27	ERVK	chr10RLTR27112236794	NonProperStrand	1	chr9	59519744	59519799	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	1	-inf
chr8	13014869	13014885	protein_coding	Mcf2l	exon	ENSMUSG00000031442	NonProperStrand	35	chr14	33005138	33005231	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	3	-11.8997
chr1	54361816	54371000	protein_coding	Ccdc150	exon	ENSMUSG00000025983	ProperStrand	56	chr2	181090431	181090668	protein_coding	Rtel1	exon	ENSMUSG00000038685	ProperStrand	22	1	-15.4816
chr4	132394363	132394415	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	3	-4.3783
chr11	68886975	68887034	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	chr4	3762227	3762293	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	2	-1.9658
chr7	140194990	140195086	protein_coding	Ctbp2	intron	ENSMUSG00000030970	ProperStrand	89	chr4	114579429	114579446	protein_coding	Foxd2	utr3	ENSMUSG00000055210	ProperStrand	5	1	-17.7780
chr11	72553974	72553993	protein_coding	Ankfy1	exon	ENSMUSG00000020790	NonProperStrand	8	chr17	24857782	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-6.1404
chr10	90432460	90432476	protein_coding	Anks1b	utr3	ENSMUSG00000058589	ProperStrand	68	chr11	83107805	83107902	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	2	-13.6525
chr19	42092596	42092617	protein_coding	Ubtd1	intron	ENSMUSG00000025171	ProperStrand	14	chr11	69483189	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-8.5983
chr9	21387989	21388007	protein_coding	Carm1	exon	ENSMUSG00000032185	NonProperStrand	1	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-inf
chr7	4745751	4746051	protein_coding	Rpl28	exon	ENSMUSG00000030432	ProperStrand	220	chr4	32794480	32794509	protein_coding	Mdn1	exon	ENSMUSG00000058006	ProperStrand	184	1	-8.4645
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr11	69639518	69639534	protein_coding	Nlgn2	utr3	ENSMUSG00000051790	NonProperStrand	2	1	-15.2570
chr7	52401155	52401356	protein_coding	Aldh16a1	exon	ENSMUSG00000007833	ProperStrand	27	chr19	8963087	8963148	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.6995
chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	chr7	16677708	16678201	protein_coding	Zfp541	exon	ENSMUSG00000078796	ProperStrand	33	1	-8.9280
chr2	121336554	121336619	protein_coding	Wdr76	exon	ENSMUSG00000027242	ProperStrand	25	chr12	106269355	106269445	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-5.8416
chr9	96101483	96101554	protein_coding	Tfdp2	intron	ENSMUSG00000032411	ProperStrand	95	chr17	24857815	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.5682
chr13	118196499	118196589	LTR	ORR1B1-int	MaLR	chr13ORR1B1-int118195901	NonProperStrand	1	chr12	3716137	3716217	protein_coding	Dtnb	intron	ENSMUSG00000071454	ProperStrand	11	1	-inf
chr7	19935606	19936050	protein_coding	Ercc1	exon	ENSMUSG00000003549	NonProperStrand	35	chr10	23505193	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.0450
chr18	38357179	38357264	protein_coding	Pcdh1	exon	ENSMUSG00000051375	ProperStrand	19	chr16	23111383	23111473	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.1411
chr3	41408827	41408866	protein_coding	Phf17	exon	ENSMUSG00000025764	ProperStrand	101	chr4	149622013	149622190	protein_coding	Eno1	exon	ENSMUSG00000063524	ProperStrand	432	1	-8.3178
chr17	23949430	23958478	protein_coding	Srrm2	exon	ENSMUSG00000039218	ProperStrand	521	chr5	130300420	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	8	-3.7290
chr7	3314134	3314213	protein_coding	Prkcc	intron	ENSMUSG00000078816	ProperStrand	1	chr8	73419660	73419750	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-inf
chr3	157662672	157664082	protein_coding	Ankrd13c	exon	ENSMUSG00000039988	ProperStrand	14	chr4	131908699	131908789	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-6.3022
chr12	114290175	114290191	protein_coding	Pacs2	intron	ENSMUSG00000021143	NonProperStrand	302	chr19	8798740	8798759	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-1.9061
chr9	40762540	40762559	protein_coding	4931429I11Rik	intron	ENSMUSG00000032023	NonProperStrand	49	chr15	79913305	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-3.9702
chr6	120467088	120468467	protein_coding	Cecr5	exon	ENSMUSG00000058979	ProperStrand	97	chr15	82980086	82980149	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-6.1887
chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	chr9	120038607	120038672	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.4986
chr17	51877558	51877575	protein_coding	Satb1	utr3	ENSMUSG00000023927	ProperStrand	62	chr4	131865391	131865493	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	2	-6.6347
chr17	35972177	35972245	protein_coding	Tubb5	exon	ENSMUSG00000001525	ProperStrand	624	chr8	125418803	125418819	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	1	-4.9897
chr8	13416895	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr6	115757990	115758130	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	3	-1.0581
chr10	76515380	76515460	protein_coding	Col18a1	utr3	ENSMUSG00000001435	ProperStrand	287	chr3	153567058	153567148	protein_coding	Msh4	intron	ENSMUSG00000005493	ProperStrand	2	1	-17.8567
chr12	94950389	94950469	LTR	RMER17C	ERVK	chr12RMER17C94950351	ProperStrand	1	chr7	125649116	125649206	Simple_repeat	(GAAA)n	Simple_repeat	chr7(GAAA)n125648986	ProperStrand	1	1	-inf
chr5	74489543	74489571	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr1	87983952	87984003	snoRNA	ENSMUSG00000077274_SNORA26	.	ENSMUSG00000077274	ProperStrand	361	2	-4.0893
chr1	74310320	74310401	protein_coding	Arpc2	exon	ENSMUSG00000006304	ProperStrand	16	chr17	46285129	46285145	protein_coding	Mad2l1bp	exon	ENSMUSG00000034509	NonProperStrand	67	1	-15.7865
chr10	87892266	87892282	protein_coding	Gnptab	exon	ENSMUSG00000035311	ProperStrand	65	chr3	123210913	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.9374
chr18	32405206	32405222	protein_coding	Ercc3	exon	ENSMUSG00000024382	ProperStrand	280	chr2	144087321	144087414	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-3.5841
chr10	81028804	81028862	protein_coding	Aes	utr3	ENSMUSG00000054452	ProperStrand	34	chr11	69483181	69483271	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.4615
chr11	45347863	45347881	LTR	LTR33	ERVL	chr11LTR3345347849	ProperStrand	1	chr17	39985399	39985499	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-inf
chr9	78326609	78326646	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr1	9932550	9932621	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-1.3281
chr5	147646459	147646477	snoRNA	ENSMUSG00000077185_SNORD102	.	ENSMUSG00000077185	ProperStrand	142	chr4	116828379	116828451	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	2	-10.7560
chr14	20610751	20610808	protein_coding	Nid2	exon	ENSMUSG00000021806	ProperStrand	372	chr10	115874668	115874685	protein_coding	Kcnmb4	intron	ENSMUSG00000054934	NonProperStrand	11	1	-13.1219
chr6	122657789	122657826	protein_coding	Nanog	utr5	ENSMUSG00000012396	ProperStrand	66	chr2	93077815	93077837	protein_coding	Tspan18	intron	ENSMUSG00000027217	NonProperStrand	14	1	-16.1029
chr19	38470512	38470530	protein_coding	Tmem20	utr5	ENSMUSG00000044026	NonProperStrand	23	chr7	117189939	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	5	-19.4210
chr11	106645208	106645254	protein_coding-noncoding	Ddx5	utr3	ENSMUSG00000020719	ProperStrand	6	chr4	131865933	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-14.8674
chr2	68583602	68583619	protein_coding	4932414N04Rik	exon	ENSMUSG00000079324	ProperStrand	7	chr18	35716699	35716776	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-6.2708
chr17	31120939	31120955	protein_coding	Umodl1	exon	ENSMUSG00000054134	ProperStrand	24	chr15	81872573	81872600	protein_coding	Nhp2l1	exon	ENSMUSG00000063480	ProperStrand	40	1	-16.0159
chr9	20947562	20947642	protein_coding	Cdc37	exon	ENSMUSG00000019471	ProperStrand	97	chr9	64024466	64024556	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	1	-7.4073
chr8	72566913	72583210	protein_coding	Sugp1	exon	ENSMUSG00000011306	NonProperStrand	5	chr4	131865856	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-10.8861
chr14	19101590	19101672	protein_coding	Rpl15	exon	ENSMUSG00000012405	ProperStrand	145	chr4	131908236	131908291	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-2.5392
chr11	101321718	101321772	protein_coding	Vat1	exon	ENSMUSG00000034993	ProperStrand	69	chr10	90076969	90076990	protein_coding	Anks1b	intron	ENSMUSG00000058589	NonProperStrand	230	1	-10.3377
chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	chr8	72542341	72542374	protein_coding	Mau2	utr3	ENSMUSG00000031858	ProperStrand	17	1	-12.6367
chr14	57057564	57057624	protein_coding	Rnf17	exon	ENSMUSG00000000365	ProperStrand	16	chr16	23110955	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.9771
chr5	116004580	116004660	protein_coding	Pxn	utr3	ENSMUSG00000029528	ProperStrand	171	chr2	91436246	91436336	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-5.4333
chr2	167836656	167836680	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	chr19	8963084	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.3633
chr2	127037416	127037448	protein_coding	Snrnp200	exon	ENSMUSG00000003660	ProperStrand	203	chr16	23111728	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-0.8994
chr19	5798243	5798271	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	mmu-miR-2137	1	19	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	1	-5.8145
chr6	87863893	87863910	lincRNA	Gm16723	intron	ENSMUSG00000085703	ProperStrand	13	chr19	8798740	8798794	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-7.8530
chr17	88385804	88385894	protein_coding	Msh6	exon	ENSMUSG00000005370	ProperStrand	150	chr2	158205270	158205350	snoRNA	ENSMUSG00000064585_SNORA71	.	ENSMUSG00000064585	ProperStrand	418	1	-7.5959
chr11	88785665	88785712	protein_coding	Scpep1	utr3	ENSMUSG00000000278	ProperStrand	54	chr11	51551280	51551339	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	3	-17.5008
chr9	120038467	120038531	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	chr11	97631140	97631159	tRNA	tRNA1444-CysGCA	.	1527328	ProperStrand	91	1	-2.3162
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr7	28061791	28061807	protein_coding	Numbl	exon	ENSMUSG00000063160	NonProperStrand	9	1	-11.8541
chr10	86154397	86158277	protein_coding	Hsp90b1	exon	ENSMUSG00000020048	ProperStrand	396	chr7	117189899	117190039	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	3	-2.0072
chr5	121658876	121658907	protein_coding	Rpl6	exon	ENSMUSG00000029614	ProperStrand	332	chr9	64022895	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-4.6679
chr2	158451027	158451043	protein_coding	Actr5	exon	ENSMUSG00000037761	NonProperStrand	94	chr17	39985308	39985391	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-5.0563
chr6	34262790	34267403	protein_coding	Akr1b3	exon	ENSMUSG00000001642	ProperStrand	71	chr14	73612915	73616539	protein_coding	Rb1	exon	ENSMUSG00000022105	ProperStrand	67	39	-19.3928
chr3	34550545	34550610	protein_coding	Sox2	utr3	ENSMUSG00000074637	ProperStrand	299	chr11	68886949	68887039	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-1.4009
chr17	25036800	25036858	protein_coding	Mapk8ip3	exon	ENSMUSG00000024163	ProperStrand	10	chr1	162967490	162967509	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-6.9960
chr17	56201444	56201534	protein_coding	Chaf1a	intron	ENSMUSG00000002835	ProperStrand	23	chr16	23110829	23110909	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.4133
chr10	75933644	75933687	protein_coding	Mcm3ap	exon	ENSMUSG00000001150	ProperStrand	95	chr5	72870661	72870679	protein_coding	Corin	intron	ENSMUSG00000005220	NonProperStrand	11	1	-15.8469
chr19	53978060	53978160	protein_coding	Pdcd4	intron	ENSMUSG00000024975	ProperStrand	21	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.2792
chr17	35646998	35647049	protein_coding	Pou5f1	exon	ENSMUSG00000024406	ProperStrand	104	chr7	142893917	142893936	protein_coding	Mki67	intron	ENSMUSG00000031004	ProperStrand	286	1	-9.0804
chr1	88423335	88423388	protein_coding	Ptma	utr5	ENSMUSG00000026238	ProperStrand	385	chr9	56266647	56266665	protein_coding	Hmg20a	utr5	ENSMUSG00000032329	ProperStrand	87	1	-8.8450
chr14	55128402	55128444	protein_coding	Prmt5	exon	ENSMUSG00000023110	ProperStrand	72	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.9763
chr18	81297413	81297431	SINE	B3A	B2	chr18B3A81297247	NonProperStrand	1	chr2	153033932	153033952	protein_coding	Tm9sf4	intron	ENSMUSG00000068040	NonProperStrand	1	1	-inf
chr2	121248227	121250324	protein_coding	Pdia3	exon	ENSMUSG00000027248	ProperStrand	74	chr19	8799845	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-4.5434
chr11	115884722	115884775	protein_coding	H3f3b	exon	ENSMUSG00000016559	ProperStrand	76	chr14	31827478	31827545	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	3	-14.7662
chr11	75578714	75578756	protein_coding	Ywhae	utr3	ENSMUSG00000020849	ProperStrand	176	chr7	117166761	117166852	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	4	-9.8328
chr17	71857922	71857951	protein_coding	Ndc80	exon	ENSMUSG00000024056	ProperStrand	33	chr9	22180736	22180775	protein_coding	Anln	exon	ENSMUSG00000036777	ProperStrand	133	1	-12.9219
chr14	19101526	19101626	protein_coding	Rpl15	exon	ENSMUSG00000012405	ProperStrand	145	chr17	23687237	23687264	tRNA	tRNA994-ArgCCG	.	1546332	ProperStrand	60	1	-11.5424
chr11	118305719	118305735	protein_coding	C1qtnf1	intron	ENSMUSG00000017446	ProperStrand	52	chr9	63869769	63869787	protein_coding	Smad6	utr5	ENSMUSG00000036867	NonProperStrand	637	1	-8.8738
chr2	164660725	164660804	protein_coding	Ctsa	exon	ENSMUSG00000017760	ProperStrand	36	chr17	34472788	34472804	protein_coding	H2-Eb2	exon	ENSMUSG00000067341	NonProperStrand	17	1	-16.9546
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chrX	156315498	156315519	protein_coding	Sh3kbp1	intron	ENSMUSG00000040990	ProperStrand	67	1	-7.7540
chr4	134772117	134772180	protein_coding	Clic4	utr3	ENSMUSG00000037242	ProperStrand	84	chr7	16534823	16534839	protein_coding	Ehd2	utr3	ENSMUSG00000074364	NonProperStrand	197	2	-16.1665
chr15	65697451	65698348	protein_coding	Efr3a	exon	ENSMUSG00000015002	ProperStrand	8	chr16	23111691	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-13.6893
chr5	143666269	143666345	protein_coding	Actb	exon	ENSMUSG00000029580	ProperStrand	446	chr1	155287314	155287356	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	1	-5.0212
chr13	119500325	119500342	antisense	Gm16263	.	ENSMUSG00000086709	ProperStrand	20	chr2	31873814	31875778	protein_coding	Nup214	exon	ENSMUSG00000001855	ProperStrand	62	1	-15.4866
chr3	89891421	89891610	protein_coding	Tpm3	exon	ENSMUSG00000027940	ProperStrand	55	chr18	35716810	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-4.1225
chr8	25805793	25807602	protein_coding	Adam3	exon	ENSMUSG00000031553	ProperStrand	7	chr4	122970392	122970466	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-11.8284
chr12	106002200	106002217	protein_coding	Clmn	utr3	ENSMUSG00000021097	ProperStrand	50	chr19	8963027	8963085	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.5849
chr6	142439080	142439096	protein_coding	Ldhb	exon	ENSMUSG00000030246	NonProperStrand	63	chr12	110923174	110923199	snoRNA	ENSMUSG00000084487_SNORD113	.	ENSMUSG00000084487	ProperStrand	183	1	-10.9782
chr11	4820972	4820990	protein_coding	Thoc5	intron	ENSMUSG00000034274	ProperStrand	325	chr19	8798484	8798550	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-2.1306
chr1	123455077	123455754	protein_coding	Ddx18	exon	ENSMUSG00000001674	ProperStrand	41	chr12	112779161	112779251	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	2	-9.0414
chr9	4287927	4287963	LINE	Lx8	L1	chr9Lx84287724	ProperStrand	6	chr18	33954817	33954907	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	6	-inf
chr14	20588156	20617659	protein_coding	Nid2	exon	ENSMUSG00000021806	ProperStrand	372	chr16	23111708	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	9	-4.4933
chr2	30479348	30479364	LINE	L1M5	L1	chr2L1M530479194	ProperStrand	10	chr6	29420126	29420142	protein_coding	Atp6v1f	exon	ENSMUSG00000004285	NonProperStrand	6	1	-19.4901
chr2	90235315	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	125583090	125583106	lincRNA	2610028E06Rik	intron	ENSMUSG00000085562	ProperStrand	4	1	-10.0500
chr8	13014869	13014887	protein_coding	Mcf2l	exon	ENSMUSG00000031442	NonProperStrand	35	chr12	8504979	8505030	protein_coding	Rhob	utr3	ENSMUSG00000054364	ProperStrand	10	1	-18.0352
chr12	60141352	60141442	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	chr6	47928993	47929030	tRNA	tRNA157-CysGCA	.	540584	ProperStrand	1	1	-inf
chr9	65952735	65953335	protein_coding	Snx1	exon	ENSMUSG00000032382	ProperStrand	7	chr11	6428077	6428165	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-7.4403
chr7	106631403	106631438	snoRNA	ENSMUSG00000065822_Snord15a	.	ENSMUSG00000065822	ProperStrand	128	chr1	89673626	89673726	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-1.9624
chr16	23111776	23111808	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	chr13	21261553	21261601	tRNA	tRNA999-MetCAT	.	93241	ProperStrand	63	1	-1.8263
chr9	106483952	106483968	LTR	RMER15-int	ERVL	chr9RMER15-int106483929	NonProperStrand	1	chr17	57168497	57168517	protein_coding	Khsrp	exon	ENSMUSG00000007670	ProperStrand	353	1	-inf
chr7	135115651	135115741	protein_coding	Fus	exon	ENSMUSG00000030795	ProperStrand	162	chr12	55797769	55797849	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	1	-5.7348
chr1	138122170	138122187	protein_coding	5730559C18Rik	intron	ENSMUSG00000041605	NonProperStrand	22	chr4	131908753	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.8292
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr2	59148322	59149809	protein_coding	Pkp4	exon	ENSMUSG00000026991	ProperStrand	33	1	-7.0904
chr17	39979942	39979983	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr1	181027187	181027205	protein_coding	Smyd3	intron	ENSMUSG00000055067	ProperStrand	231	1	-4.5881
chr4	63389602	63389618	protein_coding	Tnfsf15	utr3	ENSMUSG00000050395	NonProperStrand	121	chr7	117166721	117166760	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-3.4939
chr5	130707803	130707863	protein_coding	0610007L01Rik	exon	ENSMUSG00000053094	ProperStrand	39	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.4040
chr14	45949538	45949554	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-4.4287
chr4	131866155	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	chr11	83107806	83107902	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	3	-1.5947
chr6	134401032	134403581	protein_coding	Lrp6	exon	ENSMUSG00000030201	ProperStrand	42	chr11	69481336	69481426	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	3	-9.4885
chr15	99070172	99070188	protein_coding	Kcnh3	exon	ENSMUSG00000037579	NonProperStrand	44	chr7	26131735	26131782	protein_coding	Megf8	exon	ENSMUSG00000045039	ProperStrand	100	1	-12.9162
chr5	66651465	66651481	protein_coding	Nsun7	utr5	ENSMUSG00000029206	NonProperStrand	73	chr8	73420121	73420141	protein_coding	Rpl18a	exon	ENSMUSG00000045128	ProperStrand	394	1	-9.1502
chrX	70887746	70887798	protein_coding	Dusp9	utr3	ENSMUSG00000031383	ProperStrand	12	chr11	69481387	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	6	-20.0301
chr5	64792049	64792070	LTR	MLT1H	MaLR	chr5MLT1H64791748	NonProperStrand	30	chr8	88079074	88079116	protein_coding	Dnaja2	exon	ENSMUSG00000031701	ProperStrand	39	1	-15.5706
chr11	61697314	61697341	protein_coding	Akap10	intron	ENSMUSG00000047804	ProperStrand	17	chrX	34622906	34623024	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-5.5847
chr15	66769439	66769456	protein_coding	Ndrg1	exon	ENSMUSG00000005125	ProperStrand	35	chr17	32197416	32197432	protein_coding	Rrp1b	exon	ENSMUSG00000058392	NonProperStrand	39	1	-15.2491
chr16	11144140	11144231	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr1	9932550	9932627	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	NonProperStrand	2	1	-18.2639
chr1	163181217	163181265	protein_coding	Prdx6	utr5	ENSMUSG00000026701	ProperStrand	23	chr10	110918635	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-5.2814
chr6	90371209	90371299	protein_coding-noncoding	Ccdc37	utr3	ENSMUSG00000048794	ProperStrand	1	chr6	89508076	89508156	protein_coding	Chchd6	intron	ENSMUSG00000030086	ProperStrand	20	1	-inf
chr15	96843413	96843906	protein_coding	Slc38a4	exon	ENSMUSG00000022464	ProperStrand	139	chr4	116828389	116828453	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-6.7114
chr4	21737939	21737961	protein_coding	Usp45	exon	ENSMUSG00000040455	ProperStrand	40	chr16	23111792	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.5776
chr19	23091867	23091964	LINE	Lx9	L1	chr19Lx923091701	NonProperStrand	1	chr2	79132657	79132674	protein_coding-noncoding	Itga4	utr5	ENSMUSG00000027009	NonProperStrand	118	1	-inf
chr1	155287316	155287355	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	chr5	108336363	108336411	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	3	-3.5839
chr12	45224898	45224988	LINE	L1Md_F2	L1	chr12L1Md_F245220893	ProperStrand	1	chr14	69498254	69498334	LINE	L1_Mur3	L1	chr14L1_Mur369497891	ProperStrand	1	1	-inf
chr2	160587488	160587588	protein_coding	Plcg1	utr3	ENSMUSG00000016933	ProperStrand	65	chr9	120037900	120037932	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-4.5522
chr18	83156428	83156518	protein_coding	Zfp516	exon	ENSMUSG00000058881	ProperStrand	25	chr9	120039531	120039567	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-4.9793
chr4	109178223	109178243	protein_coding	4930522H14Rik	exon	ENSMUSG00000060491	ProperStrand	12	chr1	162965994	162966040	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-11.0138
chr2	32767952	32768008	protein_coding	Fam129b	exon	ENSMUSG00000026796	ProperStrand	22	chr2	68909484	68943073	protein_coding	Lass6	exon	ENSMUSG00000027035	ProperStrand	32	1	-16.6069
chr17	24557252	24557310	protein_coding	Rnps1	exon	ENSMUSG00000034681	ProperStrand	40	chr11	51551280	51551336	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	1	-8.5120
chr13	74470613	74471805	protein_coding	Sdha	exon	ENSMUSG00000021577	ProperStrand	70	chr15	79913288	79913346	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-3.3094
chr16	91656031	91656095	protein_coding	Son	exon	ENSMUSG00000022961	ProperStrand	59	chr2	150785521	150785621	protein_coding	Ninl	exon	ENSMUSG00000068115	ProperStrand	51	1	-13.6747
chr9	120038467	120038551	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	chr11	98572310	98572331	snoRNA	ENSMUSG00000088169_SNORD124	.	ENSMUSG00000088169	ProperStrand	62	1	-2.9804
chr5	117894014	117894033	protein_coding	Ksr2	intron	ENSMUSG00000061578	NonProperStrand	15	chr19	8963090	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.8348
chr10	88225617	88227455	protein_coding	Utp20	exon	ENSMUSG00000004356	ProperStrand	45	chr16	23111450	23111505	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.6772
chr2	120996550	120996567	protein_coding	Tubgcp4	intron	ENSMUSG00000027263	ProperStrand	30	chr11	6428109	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.4908
chr11	69730584	69732798	protein_coding	Eif5a	utr3	ENSMUSG00000078812	ProperStrand	164	chr4	131908312	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-0.7443
chr17	34022122	34022829	protein_coding	Kifc1	exon	ENSMUSG00000079553	ProperStrand	47	chr7	116664872	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	7	-inf
chr10	84242337	84242355	protein_coding	Rfx4	intron	ENSMUSG00000020037	NonProperStrand	10	chr3	68889219	68889266	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-6.7595
chr15	36527230	36527285	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr11	72990080	72990099	protein_coding	Tmem93	exon	ENSMUSG00000047260	ProperStrand	32	1	-9.1462
chr15	96291202	96291280	protein_coding	Scaf11	utr5	ENSMUSG00000033228	ProperStrand	37	chr7	116663637	116663727	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.3721
chr3	55073046	55073063	protein_coding	Dclk1	intron	ENSMUSG00000027797	NonProperStrand	11	chr11	62416951	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-9.4760
chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	chr19	8799022	8799045	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-1.7640
chr17	24857695	24857775	protein_coding-noncoding	Rps2	utr5	ENSMUSG00000044533	ProperStrand	29	chr13	51654819	51654836	protein_coding	Shc3	intron	ENSMUSG00000021448	ProperStrand	50	1	-15.1434
chr17	35294930	35294998	protein_coding	Prrc2a	exon	ENSMUSG00000024393	ProperStrand	315	chr8	108210267	108210284	protein_coding	Rltpr	intron	ENSMUSG00000050357	NonProperStrand	22	1	-12.0222
chr6	125585689	125585705	protein_coding	Vwf	exon	ENSMUSG00000001930	ProperStrand	20	chr15	78982035	78982051	protein_coding	Polr2f	exon	ENSMUSG00000033020	NonProperStrand	71	1	-15.2076
chr1	194330979	194330995	protein_coding	Kcnh1	utr3	ENSMUSG00000058248	ProperStrand	22	chr7	29136543	29136633	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.1896
chr17	57184077	57184132	protein_coding	Slc25a23	utr3	ENSMUSG00000046329	ProperStrand	6	chr6	71832550	71832628	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	4	-19.0481
chr2	158211021	158211121	protein_coding	Snhg11	utr3	ENSMUSG00000044349	ProperStrand	8	chr4	3762227	3762293	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	1	-13.6221
chr3	30716506	30716537	protein_coding	Sec62	intron	ENSMUSG00000027706	ProperStrand	12	chr12	88472755	88474402	protein_coding	Pomt2	exon	ENSMUSG00000034126	ProperStrand	15	1	-19.3113
chr17	24342579	24343602	protein_coding	Ntn3	utr3	ENSMUSG00000079662	ProperStrand	237	chr9	120039533	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	4	-4.9573
chr8	98265970	98331319	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	chr4	131908236	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	18	-13.9723
chr19	8799019	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	chr17	35088971	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	3	-0.8500
chr8	110105186	110105210	protein_coding	Psmd7	exon	ENSMUSG00000039067	ProperStrand	36	chr4	131908391	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.2156
chr17	34783152	34783232	protein_coding	Fkbpl	exon	ENSMUSG00000033739	NonProperStrand	2	chr16	23110888	23110978	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	NonProperStrand	93	2	-inf
chr2	28528378	28528409	protein_coding	Tsc1	exon	ENSMUSG00000026812	ProperStrand	29	chr2	26493364	26493425	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	3	-12.1446
chr8	83240382	83240456	protein_coding	Smarca5	exon	ENSMUSG00000031715	ProperStrand	115	chr7	116664798	116664889	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	10	-19.4114
chr4	83110932	83111022	protein_coding	Psip1	exon	ENSMUSG00000028484	ProperStrand	104	chr17	35299555	35299635	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-3.7358
chr11	48613957	48614057	protein_coding	Gnb2l1	utr5	ENSMUSG00000020372	ProperStrand	347	chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-2.5641
chr2	90235303	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr13	96247406	96248477	protein_coding	S100z	exon	ENSMUSG00000021679	NonProperStrand	43	1	-5.1055
chr15	12764369	12764399	protein_coding	Drosha	exon	ENSMUSG00000022191	ProperStrand	163	chr5	108336363	108336460	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-3.0168
chr4	126700083	126700128	protein_coding	Sfpq	exon	ENSMUSG00000028820	ProperStrand	340	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-0.8495
chr3	145651434	145651451	protein_coding	Syde2	exon	ENSMUSG00000036863	NonProperStrand	20	chr9	120038567	120038674	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-8.4791
chr17	28501304	28501394	protein_coding-noncoding	Tulp1	utr3	ENSMUSG00000037446	NonProperStrand	1	chr17	28501002	28501092	protein_coding	Tulp1	intron	ENSMUSG00000037446	NonProperStrand	4	1	-inf
chr5	115707106	115710141	protein_coding	Rnf10	exon	ENSMUSG00000041740	ProperStrand	95	chr18	35714145	35714276	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	3	-6.8507
chr9	50816824	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	chr5	125316615	125316632	protein_coding	Ccdc92	exon	ENSMUSG00000037979	ProperStrand	45	2	-19.9923
chr8	91106344	91106360	protein_coding	Nkd1	intron	ENSMUSG00000031661	ProperStrand	57	chr7	117189992	117190054	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.4262
chr11	106122231	106122547	protein_coding	Psmc5	utr5	ENSMUSG00000020708	ProperStrand	51	chrX	101157854	101157914	protein_coding	Rlim	exon	ENSMUSG00000056537	ProperStrand	38	1	-14.5643
chr1	55138011	55138524	protein_coding	Hspd1	exon	ENSMUSG00000025980	ProperStrand	140	chr11	6428093	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.7602
chr8	28234525	28234542	protein_coding	Brf2	exon	ENSMUSG00000031487	NonProperStrand	1	chr10	90581165	90581217	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-inf
chr6	117874940	117874959	protein_coding	Hnrnpf	exon	ENSMUSG00000042079	ProperStrand	147	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.7567
chr16	91658690	91658722	protein_coding	Son	exon	ENSMUSG00000022961	ProperStrand	59	chr1	33828651	33828669	protein_coding	Zfp451	intron	ENSMUSG00000042197	NonProperStrand	393	1	-9.5826
chr3	88715213	88715234	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr9	120038551	120038672	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	13	-4.0327
chr10	86221857	86221873	protein_coding	BC030307	exon	ENSMUSG00000044937	ProperStrand	77	chr7	116664805	116664849	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.1297
chr4	118807015	118807058	protein_coding	Slc2a1	exon	ENSMUSG00000028645	ProperStrand	361	chr5	108334195	108334285	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-1.6463
chr1	133252344	133252402	protein_coding	Srgap2	intron	ENSMUSG00000026425	ProperStrand	299	chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	1	-8.4709
chrX	102569259	102569275	lincRNA	5330434G04Rik	exon	ENSMUSG00000087620	ProperStrand	29	chr17	35089181	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	2	-11.1820
chr18	63908609	63908625	protein_coding	Wdr7	intron	ENSMUSG00000040560	NonProperStrand	180	chr11	6428102	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.3879
chr7	31889799	31889878	protein_coding	Hpn	intron	ENSMUSG00000001249	ProperStrand	126	chr18	33954838	33954928	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-2.2037
chr7	52381972	52382013	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	chr5	147646720	147646823	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	1	-1.7804
chr11	60529067	60529083	protein_coding	Flii	exon	ENSMUSG00000002812	ProperStrand	42	chr3	108357255	108357355	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-5.2300
chr9	44216116	44216796	protein_coding	Rps25	exon	ENSMUSG00000009927	ProperStrand	42	chr8	32260335	32260357	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	2	-8.7448
chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	chr7	67125763	67125786	snoRNA	ENSMUSG00000089375_Snord107	.	ENSMUSG00000089375	ProperStrand	451	1	-1.6179
chr9	113868587	113873745	protein_coding	Ubp1	exon	ENSMUSG00000009741	ProperStrand	29	chr17	13115704	13115784	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	1	-8.9945
chr12	114290175	114290191	protein_coding	Pacs2	intron	ENSMUSG00000021143	NonProperStrand	302	chr12	85350481	85350499	protein_coding	Acot1	utr5	ENSMUSG00000072949	ProperStrand	72	2	-15.3452
chr17	33955052	33955152	protein_coding	Kank3	exon	ENSMUSG00000042099	ProperStrand	64	chr4	131908236	131908287	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.3270
chr16	13788882	13788912	protein_coding	Rrn3	exon	ENSMUSG00000022682	ProperStrand	58	chr5	130300470	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-4.5184
chr10	41438871	41438971	protein_coding	Cep57l1	utr3	ENSMUSG00000019813	ProperStrand	36	chr7	116663724	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.4225
chr4	134302318	134302367	protein_coding	Ldlrap1	utr3	ENSMUSG00000037295	ProperStrand	18	chr9	120038613	120038672	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-8.8048
chr9	119057857	119057873	protein_coding	Acaa1b	exon	ENSMUSG00000010651	NonProperStrand	2	chr2	63936034	63936052	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-15.3248
chr8	13416897	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr19	31990503	31990520	protein_coding	A1cf	intron	ENSMUSG00000052595	NonProperStrand	8	1	-10.5674
chr6	117874988	117875094	protein_coding	Hnrnpf	utr3	ENSMUSG00000042079	ProperStrand	147	chr12	17552965	17553013	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	2	-5.7892
chr1	71656205	71657541	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr15	34370545	34370641	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	25	-19.7554
chr16	90223101	90225447	protein_coding	Sod1	exon	ENSMUSG00000022982	ProperStrand	75	chr16	23110874	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	7	-4.4381
chr2	90235298	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	180885279	180885295	protein_coding	Smyd3	utr3	ENSMUSG00000055067	NonProperStrand	190	1	-2.3723
chr12	86275693	86275947	protein_coding	1110018G07Rik	exon	ENSMUSG00000042350	ProperStrand	13	chr3	79261820	79261861	protein_coding	Fnip2	utr3	ENSMUSG00000061175	ProperStrand	45	1	-16.9696
chr7	108552472	108552488	protein_coding	Arap1	intron	ENSMUSG00000032812	NonProperStrand	2	chr18	73693085	73693107	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-12.9450
chr6	29150715	29150805	protein_coding	Impdh1	utr3	ENSMUSG00000003500	ProperStrand	20	chr7	116663647	116663727	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.5385
chr11	51433625	51436002	protein_coding	Nhp2	exon	ENSMUSG00000001056	ProperStrand	32	chr11	77996560	77996612	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-7.3427
chr16	91871006	91871052	protein_coding	Itsn1	utr3	ENSMUSG00000022957	ProperStrand	172	chr7	49889578	49889635	protein_coding	9830147E19Rik	intron	ENSMUSG00000074158	ProperStrand	3	1	-17.7048
chr5	147762101	147762183	protein_coding	Gtf3a	utr5	ENSMUSG00000016503	NonProperStrand	1	chr1	153770028	153770045	protein_coding	1700025G04Rik	intron	ENSMUSG00000032666	ProperStrand	25	1	-inf
chr9	37297281	37297337	protein_coding	BC024479	exon	ENSMUSG00000042138	ProperStrand	17	chr4	53873602	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	1	-11.6037
chr9	21440206	21490701	protein_coding	Smarca4	utr5	ENSMUSG00000032187	ProperStrand	196	chr10	110918549	110918642	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-2.7537
chr5	147646082	147646657	protein_coding	Rpl21	exon	ENSMUSG00000041453	ProperStrand	112	chr10	23505152	23505245	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-1.1265
chr2	157109509	157115302	protein_coding	Rpn2	exon	ENSMUSG00000027642	ProperStrand	363	chr7	134671464	134671518	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-4.3514
chr3	46498661	46498751	LINE	Lx7	L1	chr3Lx746498669	ProperStrand	1	chrX	153599297	153599377	protein_coding	Phex	utr3	ENSMUSG00000057457	ProperStrand	6	1	-inf
chr16	57391552	57391792	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr17	43766565	43766581	protein_coding	Tdrd6	exon	ENSMUSG00000040140	NonProperStrand	15	1	-10.6034
chrX	12655396	12749112	protein_coding	Usp9x	utr3	ENSMUSG00000031010	ProperStrand	174	chr7	29136528	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	5	-5.4887
chr12	68766719	68766809	LINE	L1_Mus2	L1	chr12L1_Mus268766146	ProperStrand	12	chr15	66287598	66287688	protein_coding	Lrrc6	intron	ENSMUSG00000022375	NonProperStrand	4	1	-20.4237
chr1	42755254	42755270	protein_coding	Pou3f3	exon	ENSMUSG00000045515	NonProperStrand	117	chr1	162965531	162965588	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-5.7585
chr8	129468755	129468845	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	chr2	166890837	166890856	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	1	-1.8283
chr14	51427238	51427286	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr7	97356395	97356482	protein_coding	Picalm	utr3	ENSMUSG00000039361	ProperStrand	23	1	-9.1384
chr14	73783672	73783719	protein_coding	Itm2b	intron	ENSMUSG00000022108	ProperStrand	25	chr1	162968463	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	3	-17.5575
chr8	80568987	80569067	LINE	L1VL1	L1	chr8L1VL180568893	ProperStrand	1	chr8	80568693	80568783	LINE	L1_Mus2	L1	chr8L1_Mus280566797	ProperStrand	1	1	-inf
chr17	29119017	29119047	protein_coding	Stk38	exon	ENSMUSG00000024006	ProperStrand	57	chr16	23110455	23110526	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.5495
chr14	33152476	33152541	protein_coding	Ogdhl	exon	ENSMUSG00000021913	ProperStrand	182	chr15	79913296	79913346	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-1.6950
chr7	3647151	3647193	protein_coding	Tsen34	exon	ENSMUSG00000035585	ProperStrand	31	chr2	158182156	158182194	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-6.3003
chr2	144116363	144116385	LTR	MLT2B2	ERVL	chr2MLT2B2144116217	NonProperStrand	17	chr11	120538825	120538880	protein_coding	Aspscr1	exon	ENSMUSG00000025142	ProperStrand	53	1	-16.1095
chr11	98858066	98858083	protein_coding	Top2a	exon	ENSMUSG00000020914	ProperStrand	324	chr3	153574602	153574654	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	3	-14.4215
chr16	17160093	17160156	protein_coding	Ube2l3	exon	ENSMUSG00000038965	ProperStrand	29	chr2	118753483	118753551	protein_coding	Chst14	utr3	ENSMUSG00000074916	ProperStrand	32	1	-16.0772
chr4	116283607	116283676	protein_coding	Nasp	exon	ENSMUSG00000028693	ProperStrand	64	chr2	145076803	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	4	-23.1930
chr9	65478533	65478633	protein_coding	Rbpms2	utr5	ENSMUSG00000032387	ProperStrand	85	chr11	48616641	48616706	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	1	-8.6484
chr2	131019016	131019106	protein_coding	Cdc25b	exon	ENSMUSG00000027330	ProperStrand	20	chr10	90581059	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-6.9795
chr8	125626955	125627005	snoRNA	ENSMUSG00000064450_Snord68	.	ENSMUSG00000064450	ProperStrand	181	chr6	71832549	71832649	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-3.5090
chr5	35219432	35219466	protein_coding	Htt	exon	ENSMUSG00000029104	ProperStrand	73	chr1	141064616	141064717	protein_coding	Dennd1b	intron	ENSMUSG00000056268	ProperStrand	23	6	-19.3669
chr5	121655018	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	chr1	9932548	9932626	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	5	-1.6442
chr7	67128304	67128375	protein_coding	Snrpn	exon	ENSMUSG00000000948	ProperStrand	32	chr16	23111468	23111508	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.2238
chr4	15816117	15816136	protein_coding	Calb1	intron	ENSMUSG00000028222	NonProperStrand	1	chr7	149170855	149171340	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	1	-inf
chr15	101925437	101925740	protein_coding	Eif4b	exon	ENSMUSG00000058655	ProperStrand	484	chr13	86184593	86184645	snoRNA	ENSMUSG00000064917_snoZ39	.	ENSMUSG00000064917	ProperStrand	15	1	-11.9508
chr8	74013109	74013125	protein_coding	Gtpbp3	exon	ENSMUSG00000007610	ProperStrand	21	chr9	65642481	65642556	protein_coding	Zfp609	exon	ENSMUSG00000040524	ProperStrand	87	1	-14.6923
chr2	90616357	90616526	protein_coding	Fnbp4	exon	ENSMUSG00000008200	ProperStrand	45	chr11	121469958	121470690	protein_coding	Tbcd	exon	ENSMUSG00000039230	ProperStrand	34	4	-19.0153
chr15	99147328	99147398	protein_coding	Prpf40b	utr3	ENSMUSG00000023007	ProperStrand	5	chrX	135510687	135510704	protein_coding	Nrk	exon	ENSMUSG00000052854	ProperStrand	24	1	-18.9154
chr4	124613990	124614041	protein_coding	Cdca8	utr5	ENSMUSG00000028873	ProperStrand	41	chr16	23110891	23110981	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-3.6651
chr4	106682526	106682626	protein_coding-noncoding	Ssbp3	utr5	ENSMUSG00000061887	ProperStrand	21	chr11	88897476	88897529	protein_coding	Dgke	utr3	ENSMUSG00000000276	ProperStrand	8	2	-18.9418
chr9	78326652	78326854	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chrX	71517922	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	4	-3.2674
chr2	164332797	164332851	protein_coding	Pigt	exon	ENSMUSG00000017721	ProperStrand	45	chrX	9685969	9685986	protein_coding	Srpx	intron	ENSMUSG00000090084	NonProperStrand	4	1	-18.8960
chr10	40008062	40008144	protein_coding	Amd1	utr3	ENSMUSG00000075232	ProperStrand	21	chr19	8798517	8798553	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	5	-19.0918
chr8	44789970	44789986	LINE	Lx7	L1	chr8Lx744789816	NonProperStrand	1	chr18	69846717	69846734	protein_coding	Tcf4	utr3	ENSMUSG00000053477	NonProperStrand	19	1	-inf
chr17	35378778	35380116	protein_coding	Ddx39b	utr5	ENSMUSG00000019432	ProperStrand	119	chr3	123210864	123210914	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-2.0832
chr11	6523906	6523922	protein_coding	Tbrg4	exon	ENSMUSG00000000384	NonProperStrand	56	chr19	8963026	8963084	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.3909
chr5	122691914	122691930	protein_coding	Hvcn1	utr3	ENSMUSG00000064267	ProperStrand	182	chr14	76247711	76247768	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-2.1885
chr17	36000485	36000501	protein_coding	Nrm	exon	ENSMUSG00000059791	ProperStrand	253	chr6	125136654	125136701	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	1	-3.6735
chr10	20080835	20080859	protein_coding	Fam54a	utr3	ENSMUSG00000019992	ProperStrand	232	chr16	23111387	23111502	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	5	-1.4919
chr19	23215858	23215874	protein_coding	Klf9	utr5	ENSMUSG00000033863	ProperStrand	83	chr3	35725890	35725907	protein_coding	Atp11b	exon	ENSMUSG00000037400	NonProperStrand	18	1	-15.0830
chr3	106524814	106524830	protein_coding	4933421E11Rik	utr5	ENSMUSG00000056260	ProperStrand	18	chr2	63936035	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-10.2961
chr10	23506845	23506998	protein_coding	Rps12	utr5	ENSMUSG00000061983	ProperStrand	309	chr16	23110525	23110571	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-0.7827
chr16	96217068	96286539	protein_coding	Brwd1	intron	ENSMUSG00000022914	ProperStrand	77	chr4	131865855	131865936	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-5.8906
chr1	78736637	78736653	LINE	Lx8	L1	chr1Lx878736589	ProperStrand	10	chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	1	-12.3782
chrX	92221195	92221213	protein_coding	Spin4	exon	ENSMUSG00000071722	NonProperStrand	14	chr2	166888978	166889028	snoRNA	ENSMUSG00000077515_SNORD12	.	ENSMUSG00000077515	ProperStrand	191	1	-13.9569
mmu-miR-1291	0	16	miRNA	mmu-miR-1291	.	mmu-miR-1291	ProperStrand	103	chr6	72849820	72849836	protein_coding	Kcmf1	utr5	ENSMUSG00000055239	NonProperStrand	3	1	-19.1145
chr4	125841449	125841539	protein_coding	Thrap3	utr3	ENSMUSG00000043962	ProperStrand	84	chr2	158182209	158182289	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-4.3567
chr3	85888808	85888828	protein_coding	Sh3d19	exon	ENSMUSG00000028082	ProperStrand	58	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-6.9919
chr4	137815140	137815170	protein_coding	Sh2d5	exon	ENSMUSG00000045349	ProperStrand	2	chr5	108334262	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-12.2128
chr5	122919418	122919518	protein_coding	Atp2a2	exon	ENSMUSG00000029467	ProperStrand	166	chr1	93320500	93320517	protein_coding	Per2	exon	ENSMUSG00000055866	NonProperStrand	44	1	-11.8970
chr4	147523719	147523753	protein_coding	Fbxo6	utr5	ENSMUSG00000055401	ProperStrand	26	chr10	110918640	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-5.0402
chr8	98264631	98264711	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	chr9	15127453	15128028	protein_coding	5830418K08Rik	exon	ENSMUSG00000046111	ProperStrand	465	1	-5.9236
chr11	102294589	102294607	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr6	72292897	72292954	protein_coding	Usp39	exon	ENSMUSG00000056305	ProperStrand	16	1	-11.5766
mmu-miR-6238	1	22	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr16	23111383	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	7	-2.7630
chr11	80965641	80965658	protein_coding	Accn1	exon	ENSMUSG00000020704	NonProperStrand	228	chr3	108357258	108357330	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-2.1378
chr2	160573820	160577431	protein_coding	Plcg1	exon	ENSMUSG00000016933	ProperStrand	65	chr11	6428058	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	6	-16.5440
chr6	119889694	119893831	protein_coding	Wnk1	exon	ENSMUSG00000045962	ProperStrand	221	chr11	51551279	51551341	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	3	-12.0220
chr11	24066154	24066170	antisense	4930538E20Rik	.	ENSMUSG00000085516	ProperStrand	6	chr5	74489266	74489327	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	1	-10.3398
chr2	130102936	130103014	protein_coding	Nop56	exon	ENSMUSG00000027405	ProperStrand	125	chr5	121655058	121655158	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.4364
chr16	96391525	96391605	protein_coding	Lca5l	intron	ENSMUSG00000045275	NonProperStrand	210	chr11	55296242	55296332	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-3.7715
chr4	118905601	118905619	protein_coding	Lepre1	exon	ENSMUSG00000028641	NonProperStrand	2	chr5	120889875	120889892	protein_coding	Lhx5	intron	ENSMUSG00000029595	NonProperStrand	106	1	-20.1541
chr7	20281978	20282021	protein_coding	Apoe	exon	ENSMUSG00000002985	ProperStrand	231	chr4	137095476	137095493	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	1	-5.4430
chr2	167836656	167836680	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	chr11	69222165	69227045	protein_coding	Kdm6b	utr5	ENSMUSG00000018476	ProperStrand	76	2	-18.0755
chr14	65401076	65401161	protein_coding	Kif13b	intron	ENSMUSG00000060012	ProperStrand	37	chr6	97112840	97112930	snoRNA	ENSMUSG00000065728_SNORA36	.	ENSMUSG00000065728	ProperStrand	158	1	-12.3453
chr3	104456726	104456816	protein_coding	Slc16a1	exon	ENSMUSG00000032902	ProperStrand	48	chr7	117189864	117189944	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-6.6512
chr8	109181783	109181808	protein_coding	Cdh1	exon	ENSMUSG00000000303	ProperStrand	283	chr14	76247711	76247791	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-1.5016
chr16	22254512	22254544	protein_coding	Tra2b	exon	ENSMUSG00000022858	ProperStrand	32	chr4	131865855	131865917	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.8186
chr8	125096654	125096754	protein_coding	Cdt1	utr3	ENSMUSG00000006585	ProperStrand	47	chr15	98350186	98350262	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-5.2339
chr7	31444603	31445279	protein_coding	Haus5	exon	ENSMUSG00000078762	ProperStrand	2	chr10	23505559	23505621	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-15.0062
chr1	102076756	102076793	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	chr2	26493366	26493474	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	4	-3.6585
chr2	157870865	157870955	protein_coding	Rprd1b	intron	ENSMUSG00000027651	NonProperStrand	2	chr2	158660801	158660881	protein_coding	Dhx35	intron	ENSMUSG00000027655	ProperStrand	37	1	-inf
chr6	34422936	34423026	SINE	PB1D10	Alu	chr6PB1D1034422912	NonProperStrand	1	chr13	98263437	98263517	lincRNA	Gm11019	intron	ENSMUSG00000078952	ProperStrand	113	1	-inf
chr15	12503504	12503521	protein_coding	Pdzd2	intron	ENSMUSG00000022197	NonProperStrand	16	chr13	48981164	48981226	protein_coding	Fam120a	exon	ENSMUSG00000038014	ProperStrand	76	1	-15.5251
chr14	93136682	93136772	LTR	ORR1A2-int	MaLR	chr14ORR1A2-int93136691	NonProperStrand	1	chr19	30027902	30027992	protein_coding	Il33	intron	ENSMUSG00000024810	ProperStrand	1	1	-inf
chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr4	116862584	116862662	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	1	-3.5337
chr1	87493646	87493736	protein_coding	Sp110	intron	ENSMUSG00000070034	NonProperStrand	2	chr1	85270418	85270507	pseudogene	Gm16026	.	ENSMUSG00000079455	NonProperStrand	2	1	-inf
chr1	34248457	34248519	protein_coding	Dst	utr5	ENSMUSG00000026131	ProperStrand	461	chrX	149828130	149828146	protein_coding	Klf8	utr3	ENSMUSG00000041649	NonProperStrand	107	1	-8.0736
chr2	162890171	162909636	protein_coding	Mybl2	utr3	ENSMUSG00000017861	ProperStrand	230	chr16	23111735	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	9	-7.9494
chr17	88386020	88386100	protein_coding	Msh6	exon	ENSMUSG00000005370	ProperStrand	150	chr17	24856620	24856710	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	2	-7.6901
chr10	60809823	60810198	protein_coding	X99384	exon	ENSMUSG00000020092	ProperStrand	60	chr17	24857721	24857801	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-4.0928
chr6	52142863	52142881	antisense	2700086A05Rik	.	ENSMUSG00000085696	ProperStrand	13	chr5	100407801	100407855	protein_coding	Hnrnpd	utr5	ENSMUSG00000000568	ProperStrand	33	1	-17.4553
chr16	97828123	97828139	protein_coding	Tmprss2	intron	ENSMUSG00000000385	ProperStrand	5	chr18	75161537	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-12.3542
chr14	20642922	20642980	protein_coding	2700060E02Rik	utr5	ENSMUSG00000021807	ProperStrand	43	chr7	58851580	58851596	protein_coding	Ano5	utr3	ENSMUSG00000055489	ProperStrand	13	1	-17.1946
chr1	190267301	190267317	protein_coding	Ush2a	exon	ENSMUSG00000026609	NonProperStrand	60	chr11	6428108	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.1922
chr7	146730030	146730099	protein_coding	Inpp5a	intron	ENSMUSG00000025477	ProperStrand	166	chr7	117190028	117190062	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-1.6192
chr13	9833566	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr19	5702032	5702119	protein_coding	Map3k11	exon	ENSMUSG00000004054	ProperStrand	12	4	-20.3003
chr17	25092172	25092252	protein_coding	Hn1l	intron	ENSMUSG00000024165	ProperStrand	45	chr3	123210891	123210981	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	6	-14.7583
chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	chr11	106362640	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-2.8156
chr19	8799138	8799172	lincRNA	Snhg1	exon	ENSMUSG00000090867	ProperStrand	100	chr3	101390115	101390175	protein_coding	Atp1a1	exon	ENSMUSG00000033161	ProperStrand	316	2	-14.2130
chr17	24858096	24858162	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chrX	34622906	34622938	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	3	-1.9323
chr5	135853913	135853930	protein_coding	Pom121	utr3	ENSMUSG00000053293	ProperStrand	127	chr8	13876096	13876227	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	2	-9.2414
chr5	115798690	115798710	protein_coding	Cox6a1	exon	ENSMUSG00000041697	ProperStrand	38	chr12	82825859	82826720	protein_coding	Map3k9	exon	ENSMUSG00000042724	ProperStrand	92	1	-13.3813
chr19	10057234	10057302	protein_coding	Fth1	utr5	ENSMUSG00000024661	ProperStrand	75	chr10	110918637	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	4	-10.4818
chr2	14994820	14996590	protein_coding	Arl5b	exon	ENSMUSG00000017418	ProperStrand	55	chr3	58941093	58941147	protein_coding	Med12l	intron	ENSMUSG00000056476	ProperStrand	18	1	-15.8852
chr15	99158595	99159749	protein_coding	Fmnl3	exon	ENSMUSG00000023008	ProperStrand	13	chrX	7640847	7640863	protein_coding	Suv39h1	exon	ENSMUSG00000039231	ProperStrand	24	1	-18.3408
chr5	31033008	31033098	protein_coding	Dpysl5	intron	ENSMUSG00000029168	ProperStrand	27	chr4	111156303	111156383	protein_coding	Agbl4	intron	ENSMUSG00000061298	NonProperStrand	33	1	-16.1100
chr11	57343025	57343056	protein_coding	Mfap3	exon	ENSMUSG00000020522	ProperStrand	91	chr16	23110457	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.7820
chr2	122607987	122608004	protein_coding	Sqrdl	utr5	ENSMUSG00000005803	NonProperStrand	1	chr5	130300436	130300526	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-inf
chr9	108594650	108594669	protein_coding	Prkar2a	utr5	ENSMUSG00000032601	ProperStrand	43	chr5	121655031	121655080	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.3767
chr2	144106347	144106364	protein_coding	8430406I07Rik	utr3	ENSMUSG00000027424	ProperStrand	43	chr11	69483194	69483235	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.0333
chr2	130109497	130109513	protein_coding	Idh3b	exon	ENSMUSG00000027406	ProperStrand	146	chr2	26493424	26493462	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-2.1729
chr2	166661149	166661193	protein_coding	Arfgef2	exon	ENSMUSG00000074582	ProperStrand	32	chr9	120038615	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-7.0608
chr17	68192055	68192145	protein_coding	Arhgap28	utr3	ENSMUSG00000024043	ProperStrand	13	chr14	52829486	52829566	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	4	-19.7502
chr15	88537699	88560429	protein_coding	Brd1	exon	ENSMUSG00000022387	ProperStrand	70	chr19	8963086	8963166	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-3.6545
chr4	76614453	76614470	protein_coding	Ptprd	intron	ENSMUSG00000028399	ProperStrand	198	chr14	33005085	33005139	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-1.8996
chr9	86676457	86676547	protein_coding	Snap91	exon	ENSMUSG00000033419	ProperStrand	17	chr16	23110911	23110991	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.8783
chr13	67245698	67245788	LTR	ORR1A2	MaLR	chr13ORR1A267245558	ProperStrand	2	chr7	52894070	52894153	protein_coding	Rasip1	exon	ENSMUSG00000044562	ProperStrand	14	1	-inf
chr4	138847284	138847327	protein_coding	Capzb	utr3	ENSMUSG00000028745	ProperStrand	44	chr19	8963027	8963083	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.8083
chr19	29678580	29678596	protein_coding	C030046E11Rik	exon	ENSMUSG00000038658	ProperStrand	104	chr7	52381719	52381758	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-6.4828
chr15	36528973	36529088	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr16	57391758	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	3	-6.7986
chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	chr1	59600638	59600656	protein_coding	Gm973	intron	ENSMUSG00000047361	NonProperStrand	13	1	-15.6613
chr13	112540780	112541440	protein_coding	Map3k1	exon	ENSMUSG00000021754	ProperStrand	113	chr19	8799855	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-3.7455
chr13	9833562	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr4	133687341	133687424	protein_coding	Ccdc21	intron	ENSMUSG00000037443	ProperStrand	112	2	-6.3623
chr7	74832292	74832321	protein_coding	Ttc23	intron	ENSMUSG00000030555	ProperStrand	11	chr10	23505150	23505236	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	6	-20.7372
chr3	30938001	30938343	protein_coding	Prkci	exon	ENSMUSG00000037643	ProperStrand	39	chr4	131865430	131865510	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	6	-19.6186
chr8	13416896	13416912	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr11	94853508	94853525	protein_coding	Ppp1r9b	exon	ENSMUSG00000038976	ProperStrand	27	1	-8.0511
chr1	53409486	53409502	protein_coding	Asnsd1	utr5	ENSMUSG00000026095	NonProperStrand	105	chr7	127979054	127979074	tRNA	tRNA861-LeuTAG	.	1730551	ProperStrand	49	1	-12.5988
chr14	79996595	79997206	protein_coding	Sugt1	exon	ENSMUSG00000022024	ProperStrand	11	chr18	35716754	35716844	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-8.8768
chr1	70167990	70168007	protein_coding	Spag16	intron	ENSMUSG00000053153	NonProperStrand	34	chr9	120039611	120039674	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-4.3830
chr15	83770046	83770063	protein_coding	Efcab6	intron	ENSMUSG00000022441	ProperStrand	60	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-5.8424
chr6	120389154	120389183	protein_coding	Kdm5a	exon	ENSMUSG00000030180	ProperStrand	57	chr2	26748215	26748456	protein_coding	Surf6	exon	ENSMUSG00000036160	ProperStrand	7	1	-17.9079
chr12	17286461	17286484	protein_coding	Pdia6	exon	ENSMUSG00000020571	ProperStrand	114	chr8	32260335	32260421	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-3.4254
chr3	89143114	89143143	lincRNA	4731419I09Rik	intron	ENSMUSG00000091513	ProperStrand	1	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-inf
chr11	115659812	115659902	protein_coding	2310067B10Rik	utr3	ENSMUSG00000020747	ProperStrand	74	chr6	140620732	140620812	protein_coding	Aebp2	intron	ENSMUSG00000030232	ProperStrand	34	1	-14.0399
chr6	87769189	87769558	protein_coding	Isy1	exon	ENSMUSG00000030056	ProperStrand	172	chr1	75474216	75474311	protein_coding	Chpf	exon	ENSMUSG00000032997	ProperStrand	12	1	-14.4816
chr18	68465542	68469051	protein_coding	Rnmt	exon	ENSMUSG00000009535	ProperStrand	21	chr11	68887027	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	5	-20.2178
chr15	88916478	88916537	protein_coding	Trabd	utr3	ENSMUSG00000015363	ProperStrand	12	chr12	104678307	104678323	protein_coding	Ifi27l1	exon	ENSMUSG00000064215	ProperStrand	32	2	-19.2477
chr7	99817288	99817312	protein_coding	Pcf11	intron	ENSMUSG00000041328	ProperStrand	27	chr4	131908689	131908792	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-4.3923
chr1	88426698	88426754	protein_coding	Ptma	utr3	ENSMUSG00000026238	ProperStrand	385	chr2	121953170	121953254	protein_coding	Patl2	intron	ENSMUSG00000027233	NonProperStrand	2	1	-17.2715
chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	chr8	120125094	120127778	protein_coding	Plcg2	exon	ENSMUSG00000034330	ProperStrand	57	1	-9.6825
chr10	118649066	118649156	protein_coding	Cand1	exon	ENSMUSG00000020114	ProperStrand	76	chr17	35087897	35087936	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	4	-14.9059
chr13	74494656	74494673	protein_coding	Ccdc127	utr3	ENSMUSG00000021578	NonProperStrand	54	chr2	22445009	22445038	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-7.9871
chr11	4739298	4739388	protein_coding	Nf2	intron	ENSMUSG00000009073	ProperStrand	72	chr12	60141422	60141502	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-6.4681
chr7	52118772	52118803	protein_coding	Ptov1	utr3	ENSMUSG00000038502	ProperStrand	26	chr2	181316563	181316579	protein_coding	Uckl1	exon	ENSMUSG00000089917	ProperStrand	142	1	-13.2773
chr3	27399747	27399865	protein_coding	Fndc3b	intron	ENSMUSG00000039286	ProperStrand	31	chrX	7143642	7143659	protein_coding	Ppp1r3f	intron	ENSMUSG00000039556	ProperStrand	23	2	-18.9596
chr11	11867679	11888105	protein_coding	Grb10	exon	ENSMUSG00000020176	NonProperStrand	159	chr4	131865855	131865977	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-3.0154
chr1	55146005	55147557	protein_coding	Hspe1	exon	ENSMUSG00000073676	ProperStrand	31	chr16	23110913	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0062
chr13	6589123	6589201	protein_coding	Pfkp	intron	ENSMUSG00000021196	ProperStrand	197	chr18	73693117	73693145	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	2	-5.5960
chr2	121949511	121949527	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	chr18	33954817	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	3	-3.3680
chr9	66526768	66526785	SINE	B4A	B4	chr9B4A66526635	ProperStrand	2	chr5	121655105	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-11.0755
chr4	43505840	43505930	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr14	21502000	21502018	protein_coding	Sec24c	exon	ENSMUSG00000039367	ProperStrand	60	1	-3.0703
chr11	116297908	116297943	protein_coding	Fam100b	intron	ENSMUSG00000050628	ProperStrand	97	chr18	33954817	33954907	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	5	-12.0761
chr13	17973295	17973385	protein_coding	Rala	utr3	ENSMUSG00000008859	ProperStrand	15	chr9	15119646	15119726	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.2385
chr16	96348933	96349040	protein_coding	Hmgn1	exon	ENSMUSG00000040681	NonProperStrand	4	chr17	35089181	35089229	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-11.1133
chr12	65400083	65400163	LINE	L1Md_F2	L1	chr12L1Md_F265400039	NonProperStrand	1	chr12	65399918	65400008	LINE	Lx9	L1	chr12Lx965399815	ProperStrand	1	1	-inf
chr10	126435798	126435819	protein_coding	Ctdsp2	utr3	ENSMUSG00000078429	ProperStrand	74	chr11	69483183	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-3.7777
chr3	28412693	28412711	protein_coding	Tnik	intron	ENSMUSG00000027692	NonProperStrand	7	chr15	79908931	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-9.8509
chr11	117157864	117157881	protein_coding	Sept9	intron	ENSMUSG00000059248	ProperStrand	60	chr17	35089238	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-5.4852
chr10	128002890	128002958	protein_coding	Pa2g4	utr5	ENSMUSG00000025364	ProperStrand	72	chr19	8799052	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-5.4756
chr16	48630859	48630958	protein_coding	Morc1	utr3	ENSMUSG00000022652	ProperStrand	28	chr11	69481335	69481378	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-4.6331
chr7	150253496	150253518	protein_coding	Cd81	utr3	ENSMUSG00000037706	ProperStrand	88	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-6.9654
chr4	126000157	126000174	protein_coding	Tekt2	exon	ENSMUSG00000028845	ProperStrand	31	chr11	6428089	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.4276
chr11	51414884	51414925	protein_coding	Hnrnpab	utr3	ENSMUSG00000020358	ProperStrand	124	chr4	22414139	22414155	protein_coding	Pou3f2	exon	ENSMUSG00000052621	NonProperStrand	90	1	-11.0408
chr19	5609529	5610028	protein_coding	Kat5	exon	ENSMUSG00000024926	ProperStrand	20	chr7	54107253	54107343	protein_coding	Ldha	exon	ENSMUSG00000063229	ProperStrand	280	1	-12.4533
chr8	40681587	40681603	protein_coding	Msr1	intron	ENSMUSG00000025044	ProperStrand	138	chr4	41150112	41150158	snoRNA	ENSMUSG00000089265_SNORD121A	.	ENSMUSG00000089265	ProperStrand	370	1	-8.0036
chr19	8798523	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	chr5	147646748	147646848	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	1	-0.7514
chr7	24788138	24788154	protein_coding	V1rd19	exon	ENSMUSG00000092456	ProperStrand	1	chr11	68886928	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-inf
chr7	20315178	20315258	protein_coding	Pvrl2	intron	ENSMUSG00000062300	ProperStrand	110	chr7	25382483	25382572	protein_coding	Ethe1	intron	ENSMUSG00000064254	NonProperStrand	3	3	-inf
chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	chr11	87172190	87172206	protein_coding	Ppm1e	exon	ENSMUSG00000046442	ProperStrand	112	1	-9.3668
chr15	82725599	82725636	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	chr11	116299989	116300089	protein_coding	Fam100b	utr3	ENSMUSG00000050628	ProperStrand	97	1	-7.5634
chr2	32781399	32781417	protein_coding	Lrsam1	utr3	ENSMUSG00000026792	ProperStrand	80	chr8	13416895	13416912	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-5.8874
chr11	62416575	62416594	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr7	29073210	29073330	protein_coding	BC089491	exon	ENSMUSG00000046750	ProperStrand	62	1	-8.9059
chr9	106760313	106760360	protein_coding	Vprbp	exon	ENSMUSG00000040325	ProperStrand	35	chrX	149828130	149828146	protein_coding	Klf8	utr3	ENSMUSG00000041649	NonProperStrand	107	1	-13.2397
chr9	120038564	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	chr16	32243820	32243875	snoRNA	ENSMUSG00000080440_SNORA79	.	ENSMUSG00000080440	ProperStrand	140	1	-1.6300
chr3	55890183	55890200	protein_coding	Nbea	utr5	ENSMUSG00000027799	NonProperStrand	115	chr9	123763783	123763799	protein_coding	Xcr1	utr3	ENSMUSG00000060509	NonProperStrand	40	1	-12.8251
chr6	7333536	7333553	LINE	L1MA5	L1	chr6L1MA57333487	ProperStrand	3	chr4	131908420	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-7.2242
chr11	100342833	100343070	protein_coding	Acly	exon	ENSMUSG00000020917	ProperStrand	183	chr1	88247740	88247799	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	3	-7.6515
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	43110993	43111010	LINE	Lx6	L1	chr2Lx643110257	ProperStrand	35	3	-12.8788
chr8	13416896	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr17	30060605	30060622	protein_coding	Mdga1	intron	ENSMUSG00000043557	NonProperStrand	8	1	-10.5674
chr5	120889875	120889892	protein_coding	Lhx5	intron	ENSMUSG00000029595	NonProperStrand	106	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-10.5422
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr9	57435425	57435441	protein_coding	Scamp2	utr3	ENSMUSG00000040188	NonProperStrand	16	2	-18.0589
chr17	34678358	34678438	protein_coding	Btnl7	exon	ENSMUSG00000061728	ProperStrand	3	chr19	8963051	8963141	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-8.3179
chr9	15090967	15091067	protein_coding	4931406C07Rik	intron	ENSMUSG00000031938	ProperStrand	2	chr5	145532310	145532359	protein_coding	Trrap	intron	ENSMUSG00000045482	ProperStrand	399	1	-16.9720
chr19	9088840	9088920	protein_coding	Ahnak	exon	ENSMUSG00000069833	ProperStrand	103	chr4	131865877	131865967	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.0058
chr17	26835474	26835506	protein_coding	Atp6v0e	intron	ENSMUSG00000015575	ProperStrand	2	chr16	23111448	23111505	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-inf
chr3	36466718	36466751	protein_coding	Ccna2	exon	ENSMUSG00000027715	ProperStrand	74	chr5	34805443	34805461	protein_coding	Fam193a	intron	ENSMUSG00000037210	ProperStrand	41	1	-13.6664
chr6	141198763	141198780	protein_coding	Pde3a	exon	ENSMUSG00000041741	ProperStrand	9	chr14	33005139	33005186	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-7.7725
chr4	43505900	43505930	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr9	44317206	44317278	protein_coding	Bcl9l	exon	ENSMUSG00000063382	ProperStrand	12	1	-6.1793
chr5	115322978	115322994	protein_coding	4930519G04Rik	intron	ENSMUSG00000029564	ProperStrand	22	chr11	62416601	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-7.1558
chr2	50766794	50766810	pseudogene	Gm13498	.	ENSMUSG00000083270	ProperStrand	4	chr5	121655016	121655127	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-9.2889
chr12	88778631	88778720	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	chr2	166890561	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-1.3231
chr11	84752279	84752369	SINE	B3	B2	chr11B384752226	ProperStrand	1	chr5	144687452	144687542	antisense	Gm17135	.	ENSMUSG00000091351	ProperStrand	2	1	-inf
chr6	97112808	97112879	snoRNA	ENSMUSG00000065728_SNORA36	.	ENSMUSG00000065728	ProperStrand	158	chr8	73419657	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	5	-8.2100
chr1	88252835	88252905	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	chr4	131908236	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	32	-2.0440
chr3	37750806	37750824	LINE	L1_Mus3	L1	chr3L1_Mus337750762	ProperStrand	38	chr2	130102054	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-6.2554
chr6	129628834	129628851	protein_coding	Klrc1	exon	ENSMUSG00000030167	NonProperStrand	49	chr18	35714220	35714245	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-3.8183
chr3	87719889	87719910	protein_coding	Hdgf	utr3	ENSMUSG00000004897	ProperStrand	117	chr9	120038572	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	3	-5.2936
chr14	102033354	102033370	protein_coding	Commd6	utr3	ENSMUSG00000075486	NonProperStrand	1	chr11	6428108	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-inf
chr7	87021687	87021708	protein_coding	Ap3s2	utr3	ENSMUSG00000063801	ProperStrand	20	chr16	38158104	38158168	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	1	-10.8736
chr13	30338191	30338207	protein_coding	Mboat1	utr3	ENSMUSG00000038732	NonProperStrand	148	chr2	130101986	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-3.6383
chr11	116714560	116714638	protein_coding	Mfsd11	intron	ENSMUSG00000020818	NonProperStrand	4	chr9	78326539	78326577	protein_coding	Eef1a1	utr3	ENSMUSG00000037742	ProperStrand	1990	3	-21.2179
chr2	155841337	155841438	protein_coding	Ergic3	intron	ENSMUSG00000005881	ProperStrand	15	chr10	23505152	23505230	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.5481
chr8	87195130	87195171	protein_coding	Nacc1	utr3	ENSMUSG00000001910	ProperStrand	130	chr2	152495235	152495255	protein_coding	H13	utr5	ENSMUSG00000019188	NonProperStrand	16	1	-14.4419
chr15	79748663	79748723	protein_coding	Cbx7	utr3	ENSMUSG00000053411	ProperStrand	62	chr8	73419673	73419763	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.0713
chr14	56368104	56368194	protein_coding	2610027L16Rik	intron	ENSMUSG00000019297	ProperStrand	43	chr9	15119646	15119726	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.2218
chr9	121399142	121399159	protein_coding	Cck	utr3	ENSMUSG00000032532	ProperStrand	2	chr7	117189865	117189932	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-13.6430
chr19	7100796	7114407	protein_coding	Stip1	exon	ENSMUSG00000024966	ProperStrand	100	chr16	23111374	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	6	-6.2232
chr1	36408533	36408623	protein_coding	4632411B12Rik	exon	ENSMUSG00000010453	ProperStrand	24	chr4	131908273	131908353	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.9196
chr12	114290175	114290191	protein_coding	Pacs2	intron	ENSMUSG00000021143	NonProperStrand	302	chr5	121655016	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-2.1397
chr2	90235294	90235345	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	135932919	135932935	protein_coding	Hip1	exon	ENSMUSG00000039959	ProperStrand	30	1	-5.8128
chr11	116535921	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr15	99055310	99055330	protein_coding	Kcnh3	utr5	ENSMUSG00000037579	ProperStrand	24	3	-17.4246
chr7	133343678	133343695	protein_coding	Xpo6	utr5	ENSMUSG00000000131	ProperStrand	36	chr15	82980100	82980179	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	4	-inf
chr11	108204937	108204953	protein_coding	Prkca	exon	ENSMUSG00000050965	ProperStrand	48	chr4	131908753	131908807	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.5413
chr1	182503802	182509436	protein_coding	Parp1	exon	ENSMUSG00000026496	ProperStrand	227	chr7	29136595	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-1.1753
chr11	80415108	80415125	protein_coding	Myo1d	exon	ENSMUSG00000035441	ProperStrand	144	chr7	116664870	116664916	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.1908
chr11	101304880	101304980	protein_coding	Rpl27	exon	ENSMUSG00000063316	ProperStrand	96	chr4	131908232	131908273	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.8099
chr5	122304435	122304453	protein_coding	Fam109a	utr3	ENSMUSG00000044134	ProperStrand	12	chr5	130300460	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-13.2233
chr8	72663014	72663050	protein_coding	Rfxank	utr5	ENSMUSG00000036120	ProperStrand	6	chr13	23627655	23627708	protein_coding	Hist1h3g	exon	ENSMUSG00000062417	ProperStrand	25	1	-18.9810
chr2	69060008	69060031	protein_coding	G6pc2	intron	ENSMUSG00000005232	ProperStrand	2	chr1	16093313	16093363	protein_coding	Rpl7	exon	ENSMUSG00000043716	ProperStrand	93	1	-20.0851
chr1	74482589	74482633	protein_coding	Usp37	utr3	ENSMUSG00000033364	ProperStrand	47	chr7	148634760	148634836	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-7.4184
chr11	69266813	69266830	protein_coding	Dnahc2	exon	ENSMUSG00000005237	ProperStrand	95	chr4	131908689	131908885	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-2.3745
chr9	110845737	110848344	protein_coding	Tdgf1	exon	ENSMUSG00000032494	ProperStrand	218	chr14	76372344	76372424	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	1	-6.4261
chr11	87913128	87913145	processed_transcript	2210416O15Rik	.	ENSMUSG00000087498	ProperStrand	76	chr19	8963027	8963083	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.8903
chr6	113118507	113118525	protein_coding	Lhfpl4	utr3	ENSMUSG00000042873	ProperStrand	47	chr3	94167315	94167331	protein_coding	C2cd4d	utr5	ENSMUSG00000091648	ProperStrand	30	1	-15.2352
chr7	138771297	138771313	protein_coding	Fgfr2	intron	ENSMUSG00000030849	ProperStrand	100	chr8	13014869	13014885	protein_coding	Mcf2l	exon	ENSMUSG00000031442	NonProperStrand	35	1	-13.3775
chr7	4745167	4745202	protein_coding	Rpl28	exon	ENSMUSG00000030432	ProperStrand	220	chr9	88377172	88377188	protein_coding	Syncrip	utr5	ENSMUSG00000032423	ProperStrand	35	1	-11.7962
chr1	36529126	36529216	protein_coding	Cnnm4	exon	ENSMUSG00000037408	ProperStrand	12	chr4	131908357	131908410	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.2270
chr5	111218287	111220103	protein_coding	Ulk1	intron	ENSMUSG00000029512	ProperStrand	92	chr16	23111375	23111499	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-1.5160
chr1	121367349	121367406	protein_coding	Ralb	utr3	ENSMUSG00000004451	ProperStrand	17	chr15	77597977	77597993	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	1	-11.3657
chr17	26145817	26148992	protein_coding	Rab11fip3	exon	ENSMUSG00000037098	ProperStrand	32	chr7	117189863	117189932	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-7.4612
chr9	95524997	95525036	antisense	Gm16126	.	ENSMUSG00000086585	NonProperStrand	229	chr16	23111689	23111811	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	32	-19.4578
chr15	78920069	78920139	protein_coding	Eif3l	exon	ENSMUSG00000033047	ProperStrand	81	chr17	24857740	24857830	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.8110
chr2	25421638	25421657	protein_coding	Mamdc4	exon	ENSMUSG00000026941	ProperStrand	11	chr19	8799035	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-9.2610
chr16	21525236	21525252	protein_coding	Vps8	intron	ENSMUSG00000033653	ProperStrand	27	chr16	23111417	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.5132
chr13	69765946	69766036	protein_coding	Nsun2	exon	ENSMUSG00000021595	ProperStrand	110	chr12	17552948	17553028	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-3.9330
chr10	120853248	120854144	protein_coding	Rassf3	exon	ENSMUSG00000025795	ProperStrand	26	chr16	23110548	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.9778
chr16	33956594	33956674	protein_coding	Umps	utr3	ENSMUSG00000022814	ProperStrand	20	chr2	26493390	26493480	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-5.8702
chr2	48761075	48764791	protein_coding	Orc4	exon	ENSMUSG00000026761	ProperStrand	95	chr4	133574127	133574143	protein_coding	Lin28a	exon	ENSMUSG00000050966	ProperStrand	55	1	-12.5648
chr10	90581049	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	chr7	67123693	67123757	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	1	-1.5032
chr16	59558960	59559013	processed_transcript	Gm9581	.	ENSMUSG00000091562	ProperStrand	5	chr3	108357281	108357381	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	2	-15.5700
chr7	111493533	111493565	protein_coding	Trim12c	exon	ENSMUSG00000057143	NonProperStrand	2	chr9	15118324	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-inf
chr6	113097551	113097617	protein_coding	Setd5	exon	ENSMUSG00000034269	ProperStrand	162	chr8	122937197	122937218	protein_coding	Gm20388	intron	ENSMUSG00000092329	NonProperStrand	203	2	-14.0793
chr11	60533648	60533872	protein_coding	Flii	exon	ENSMUSG00000002812	ProperStrand	42	chr4	131865950	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.3470
chr15	102331939	102332014	protein_coding	Map3k12	exon	ENSMUSG00000023050	ProperStrand	5	chr16	23110941	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr11	77994801	77994827	protein_coding	Tlcd1	utr3	ENSMUSG00000019437	ProperStrand	4	chr13	44965332	44965393	protein_coding	Jarid2	intron	ENSMUSG00000038518	ProperStrand	372	1	-15.3371
chr13	55705852	55705973	protein_coding	B4galt7	intron	ENSMUSG00000021504	ProperStrand	6	chr5	130300526	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-7.0019
chr8	28263467	28263487	protein_coding	Rab11fip1	exon	ENSMUSG00000031488	NonProperStrand	9	chr4	154629597	154629646	protein_coding	2610002J02Rik	intron	ENSMUSG00000073684	ProperStrand	18	1	-18.6028
chr17	29388486	29388532	protein_coding	Ppil1	exon	ENSMUSG00000024007	ProperStrand	17	chr11	5180669	5180685	protein_coding	Znrf3	utr3	ENSMUSG00000041961	NonProperStrand	210	1	-13.3652
chr18	13286372	13286388	LTR	ORR1A2-int	MaLR	chr18ORR1A2-int13286204	ProperStrand	3	chr15	79076477	79076897	protein_coding	Pick1	exon	ENSMUSG00000068206	ProperStrand	21	3	-inf
chr8	99623613	99623703	LTR	MTE2a-int	MaLR	chr8MTE2a-int99623445	NonProperStrand	1	chr8	99623982	99624072	LTR	MTE2a-int	MaLR	chr8MTE2a-int99623956	NonProperStrand	1	1	-inf
chr14	121343034	121343080	protein_coding	Ipo5	exon	ENSMUSG00000030662	ProperStrand	135	chr9	63868722	63868739	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	1	-6.9718
chr5	108249051	108249069	protein_coding	Evi5	intron	ENSMUSG00000011831	NonProperStrand	7	chr7	52714001	52714019	protein_coding	Ftl1	exon	ENSMUSG00000050708	ProperStrand	807	1	-12.5368
chr7	59143310	59143410	protein_coding	Gas2	exon	ENSMUSG00000030498	ProperStrand	10	chr9	15118323	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-6.9876
chr16	15628734	15628802	protein_coding	Mcm4	exon	ENSMUSG00000022673	ProperStrand	51	chr2	26494708	26494760	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	4	-11.4749
chr1	162968167	162968398	non_coding	Gas5	.	ENSMUSG00000053332	ProperStrand	144	chr2	103880860	103880966	snoRNA	ENSMUSG00000087739_SCARNA21	.	ENSMUSG00000087739	ProperStrand	50	1	-11.9231
chr10	61863226	61863243	protein_coding	Hkdc1	exon	ENSMUSG00000020080	NonProperStrand	3	chr5	134790308	134790355	protein_coding	Gtf2i	utr5	ENSMUSG00000060261	ProperStrand	41	1	-inf
chr6	86475433	86475533	protein_coding	Pcbp1	exon	ENSMUSG00000051695	ProperStrand	108	chr18	35716827	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-2.4398
chr4	135476976	135477047	protein_coding	Fuca1	exon	ENSMUSG00000028673	ProperStrand	16	chr2	91768132	91768148	protein_coding	Chrm4	exon	ENSMUSG00000040495	NonProperStrand	55	1	-16.1588
chr10	75181998	75182078	protein_coding	Cabin1	intron	ENSMUSG00000020196	ProperStrand	62	chr15	79908934	79909014	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-5.4086
chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	chr19	46108449	46108499	protein_coding	Ldb1	utr3	ENSMUSG00000025223	ProperStrand	42	1	-9.9269
chr8	37647759	37647805	protein_coding	Dlc1	exon	ENSMUSG00000031523	ProperStrand	89	chr9	120039631	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.6179
chr6	146517021	146517039	protein_coding	4933424B01Rik	intron	ENSMUSG00000040250	ProperStrand	11	chr4	131908357	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.3989
chr17	46285129	46285145	protein_coding	Mad2l1bp	exon	ENSMUSG00000034509	NonProperStrand	67	chr11	106362638	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	2	-11.5432
chr9	15119287	15119381	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	chr12	110874258	110874290	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	4	-7.8054
chr9	101228434	101228514	LINE	L1Md_F2	L1	chr9L1Md_F2101228046	ProperStrand	1	chrX	54305572	54305662	LINE	L1Md_F2	L1	chrXL1Md_F254304902	ProperStrand	1	1	-inf
chr8	97972201	97972258	protein_coding	Csnk2a2	utr3	ENSMUSG00000046707	NonProperStrand	10	chr16	23111447	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	NonProperStrand	38	1	-17.9793
chr2	90235294	90235331	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	36879964	36881564	protein_coding	Tmem131	exon	ENSMUSG00000026116	ProperStrand	129	1	-3.0438
chr10	89274788	89274842	protein_coding	Uhrf1bp1l	exon	ENSMUSG00000019951	ProperStrand	28	chr5	108336376	108336466	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-10.3612
chr9	120038344	120040599	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	chr16	23111374	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	8	-1.3171
chr9	21548752	21548768	protein_coding	Ldlr	exon	ENSMUSG00000032193	NonProperStrand	39	chr4	131865871	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.4732
chr9	103257354	103257454	protein_coding	Cdv3	utr3	ENSMUSG00000032803	ProperStrand	68	chr17	35299505	35299544	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-4.5369
chr3	65184572	65184601	protein_coding	Ssr3	utr3	ENSMUSG00000027828	ProperStrand	24	chr7	116663665	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	8	-inf
chr3	153991597	153991614	protein_coding	Lhx8	utr5	ENSMUSG00000093486	NonProperStrand	47	chr17	35088970	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-6.3497
chr2	129998643	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr9	15119967	15119988	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	3	-6.2230
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr15	34167890	34167907	protein_coding	Laptm4b	utr5	ENSMUSG00000022257	NonProperStrand	9	1	-9.7556
chr2	9874028	9874050	protein_coding	Taf3	exon	ENSMUSG00000025782	ProperStrand	62	chr1	162965983	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-3.5427
chrX	71200593	71205025	protein_coding	Hcfc1	exon	ENSMUSG00000031386	ProperStrand	424	chr1	162967490	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	4	-3.0651
chr2	179322377	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr1	162967490	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-3.1167
chr6	86337664	86337683	protein_coding	Pcyox1	utr3	ENSMUSG00000029998	NonProperStrand	13	chr3	106909227	106909243	protein_coding	Kcna2	utr3	ENSMUSG00000040724	ProperStrand	17	1	-18.9411
chr2	75501688	75503091	protein_coding	Hnrnpa3	exon	ENSMUSG00000059005	ProperStrand	289	chr10	110918548	110918628	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-0.9494
chrX	101017112	101017128	protein_coding	Slc16a2	exon	ENSMUSG00000033965	ProperStrand	35	chr4	131908357	131908415	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-4.0554
chr2	162760355	162760372	protein_coding	Srsf6	exon	ENSMUSG00000016921	NonProperStrand	1	chr5	122691914	122691930	protein_coding	Hvcn1	utr3	ENSMUSG00000064267	ProperStrand	182	1	-inf
chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	chr3	101182163	101182212	protein_coding	Igsf3	utr5	ENSMUSG00000042035	ProperStrand	73	1	-9.8822
chr4	3762331	3762374	protein_coding-noncoding	Rps20	utr3	ENSMUSG00000028234	ProperStrand	4	chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	1	-14.8554
chr5	21272447	21274268	protein_coding	Dnajc2	exon	ENSMUSG00000029014	ProperStrand	31	chr10	110918549	110918629	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-4.6973
chr2	91578842	91578858	protein_coding	Ambra1	intron	ENSMUSG00000040506	NonProperStrand	6	chr15	98350186	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-9.4488
chr4	36037813	36037833	protein_coding	Lingo2	intron	ENSMUSG00000045083	ProperStrand	17	chr2	26494708	26494808	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.5152
chr9	21650208	21650977	protein_coding	Dock6	exon	ENSMUSG00000032198	ProperStrand	155	chr10	126668033	126668058	protein_coding	Kif5a	exon	ENSMUSG00000074657	ProperStrand	18	1	-13.8508
chr5	135097846	135097936	protein_coding	Eif4h	exon	ENSMUSG00000040731	ProperStrand	46	chr19	9044475	9047059	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	1	-9.9991
chr3	156224612	156224628	lincRNA	4930570G19Rik	exon	ENSMUSG00000085084	ProperStrand	326	chr9	53403438	53403470	protein_coding	Acat1	exon	ENSMUSG00000032047	ProperStrand	13	1	-13.0380
chr6	120850341	120850370	protein_coding	Bid	exon	ENSMUSG00000004446	ProperStrand	6	chr11	53939277	53939293	protein_coding	P4ha2	exon	ENSMUSG00000018906	ProperStrand	8	1	-18.4474
chr5	85602800	85602900	LTR	RLTR44C	ERVK	chr5RLTR44C85602798	ProperStrand	3	chr8	73421075	73421132	protein_coding	Rpl18a	intron	ENSMUSG00000045128	ProperStrand	394	3	-inf
chr18	37911790	37911806	protein_coding	Pcdhga9	intron	ENSMUSG00000023036	ProperStrand	245	chr9	15118518	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	2	-10.5619
chr7	106751971	106752071	protein_coding	Arrb1	utr3	ENSMUSG00000018909	ProperStrand	46	chr4	131866238	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-4.1639
chr4	24555746	24555763	protein_coding	Klhl32	intron	ENSMUSG00000040387	ProperStrand	67	chr4	131865939	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.5997
chr15	96839480	96840388	protein_coding	Slc38a4	exon	ENSMUSG00000022464	ProperStrand	139	chr3	90279820	90279856	tRNA	tRNA792-MetCAT	.	138513	ProperStrand	42	13	-18.6298
chr7	127987285	128001859	protein_coding	Eef2k	utr5	ENSMUSG00000035064	NonProperStrand	31	chr2	130101986	130102056	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-6.6609
chr3	90016906	90016943	protein_coding	Rps27	exon	ENSMUSG00000090733	ProperStrand	40	chr9	15118256	15118321	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-4.2260
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr15	76430905	76430923	protein_coding	Cpsf1	exon	ENSMUSG00000034022	NonProperStrand	5	1	-9.5409
chr13	9833561	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr11	97643416	97643467	protein_coding-noncoding	Rpl23	utr3	ENSMUSG00000071415	ProperStrand	5	3	-19.1127
chr15	86701441	86701531	LINE	L1Md_F2	L1	chr15L1Md_F286701409	NonProperStrand	1	chr17	35521381	35521471	protein_coding	H2-Q4	utr3	ENSMUSG00000035929	NonProperStrand	10	1	-inf
chr5	147022539	147022592	protein_coding	Rnf6	exon	ENSMUSG00000029634	ProperStrand	6	chr9	15119724	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-7.1405
chr8	4190398	4190488	processed_transcript	4932443L11Rik	.	ENSMUSG00000086805	ProperStrand	3	chr4	132546321	132546401	protein_coding	Fgr	intron	ENSMUSG00000028874	NonProperStrand	1	1	-inf
chr2	148506126	148506145	LTR	MER67C	ERV1	chr2MER67C148506121	ProperStrand	3	chr7	117189944	117190034	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-9.5269
chr13	52733514	52733594	protein_coding	Syk	exon	ENSMUSG00000021457	ProperStrand	20	chr7	116663675	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	5	-18.4563
chr11	78313939	78313956	protein_coding	Vtn	exon	ENSMUSG00000017344	ProperStrand	188	chr1	88248633	88248661	snoRNA	ENSMUSG00000064696_SNORD20	.	ENSMUSG00000064696	ProperStrand	89	1	-10.2300
chr8	125629016	125629057	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	chr16	91729698	91729722	protein_coding	Itsn1	utr5	ENSMUSG00000022957	ProperStrand	172	1	-8.5017
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr19	8897366	8897752	protein_coding	Hnrnpul2	exon	ENSMUSG00000071659	ProperStrand	93	4	-19.9753
chr4	74923522	74923564	protein_coding	3110001D03Rik	utr3	ENSMUSG00000028398	ProperStrand	1	chr5	108336363	108336444	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-inf
chr4	123190297	123191149	protein_coding	Macf1	exon	ENSMUSG00000028649	ProperStrand	320	chr7	116664809	116664868	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	7	-5.5952
chr2	113674195	113674275	protein_coding	Arhgap11a	exon	ENSMUSG00000041219	ProperStrand	47	chr19	8963030	8963120	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.6924
chr7	148195607	148195623	protein_coding	Ifitm3	utr3	ENSMUSG00000025492	NonProperStrand	20	chr17	35089181	35089234	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	3	-17.1400
chr8	106785456	106786070	protein_coding	Cklf	exon	ENSMUSG00000054400	ProperStrand	5	chr5	115940323	115940407	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	1	-13.8972
chr11	102294589	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr2	26768368	26768433	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	5	-8.5464
chr5	115692516	115692553	protein_coding	Rnf10	exon	ENSMUSG00000041740	ProperStrand	95	chr11	77996558	77996609	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-5.1935
chr13	81962988	81963008	SINE	B1F2	Alu	chr13B1F281962960	ProperStrand	15	chr19	8800377	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-6.2234
chr12	111932371	111932433	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr2	32818888	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	9	-14.4648
chr6	64033340	64033358	protein_coding	Grid2	intron	ENSMUSG00000071424	ProperStrand	20	chr11	116938641	116938693	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-8.3612
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr2	4829164	4829180	protein_coding	Sephs1	utr3	ENSMUSG00000026662	NonProperStrand	271	1	-4.8345
chr7	150256757	150256800	protein_coding	Tssc4	exon	ENSMUSG00000045752	ProperStrand	13	chr8	73419657	73419757	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	9	-inf
chr13	85374058	85377794	protein_coding	Rasa1	exon	ENSMUSG00000021549	ProperStrand	48	chr11	70839405	70839476	protein_coding	Mis12	utr3	ENSMUSG00000040599	ProperStrand	12	8	-21.1834
chr15	78832592	78832634	protein_coding	Triobp	exon	ENSMUSG00000033088	ProperStrand	29	chr2	26493379	26493479	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-8.4784
chr8	64017614	64028377	protein_coding	Palld	exon	ENSMUSG00000058056	NonProperStrand	125	chr2	144087332	144087375	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-5.1082
chr18	66147496	66151012	protein_coding	Lman1	exon	ENSMUSG00000041891	ProperStrand	36	chr15	98350188	98350268	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-5.7571
chr17	66728842	66728884	protein_coding	1110012J17Rik	exon	ENSMUSG00000052105	ProperStrand	60	chr6	142211245	142214830	protein_coding	Slco1a5	exon	ENSMUSG00000063975	NonProperStrand	38	1	-14.2378
chr8	87498080	87498113	protein_coding	Prdx2	utr3	ENSMUSG00000005161	ProperStrand	20	chr1	24621377	24621394	protein_coding	Gm10925	exon	ENSMUSG00000090378	NonProperStrand	70	1	-15.2312
chr6	125091318	125091406	protein_coding	Nop2	exon	ENSMUSG00000038279	ProperStrand	39	chr1	162966007	162966040	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-7.3729
chr4	131865380	131865457	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	NonProperStrand	15	chr19	27778479	27778501	snoRNA	ENSMUSG00000088266_SNORA48	.	ENSMUSG00000088266	NonProperStrand	1	1	-inf
chr3	104598328	104598675	protein_coding	Mov10	exon	ENSMUSG00000002227	ProperStrand	96	chr2	144087323	144087372	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-5.6210
chr3	86343606	86343692	protein_coding	Lrba	intron	ENSMUSG00000028080	ProperStrand	39	chr18	35716856	35716883	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.9102
chr9	107948233	107948313	protein_coding	Ip6k1	utr3	ENSMUSG00000032594	ProperStrand	61	chr16	38158139	38158229	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	3	-18.9531
chr12	29316522	29318693	protein_coding	Rps7	exon	ENSMUSG00000061477	ProperStrand	129	chr17	24857717	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-2.2123
chr11	69266814	69267278	protein_coding	Dnahc2	exon	ENSMUSG00000005237	ProperStrand	95	chr14	34180215	34180339	protein_coding	Arhgap22	exon	ENSMUSG00000063506	ProperStrand	11	3	-20.1406
chr17	24665420	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	chr11	62416954	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	6	-1.5446
chr9	40612875	40612921	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	chr17	24857784	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	4	-1.2817
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	24621138	24621183	protein_coding	Gm10925	utr3	ENSMUSG00000090378	ProperStrand	320	1	-1.5469
chr9	15118325	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	chr4	132394350	132394449	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	4	-2.6086
chr13	99458266	99458283	protein_coding	Tmem171	intron	ENSMUSG00000052485	NonProperStrand	1	chr1	162966813	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-inf
chr8	72437056	72437089	protein_coding	Gatad2a	exon	ENSMUSG00000036180	ProperStrand	112	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-6.4887
chr9	30235085	30235102	protein_coding	Snx19	exon	ENSMUSG00000031993	ProperStrand	353	chr18	73693112	73693139	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	3	-6.0446
chr16	92305535	92305570	protein_coding	Fam165b	utr5	ENSMUSG00000051989	ProperStrand	4	chr16	23110914	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-8.2228
chr1	24059560	24059594	protein_coding	Fam135a	intron	ENSMUSG00000026153	ProperStrand	8	chr1	120581533	120581619	protein_coding	Tfcp2l1	utr3	ENSMUSG00000026380	ProperStrand	158	2	-19.0215
chr7	129297495	129297517	antisense	Gm15489	.	ENSMUSG00000086942	NonProperStrand	1	chr10	39978273	39978363	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-inf
chr1	183047683	183047719	protein_coding	Nvl	exon	ENSMUSG00000026516	ProperStrand	89	chr3	68889026	68889126	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	2	-4.4969
chr4	58943135	58943153	LINE	L1M2	L1	chr4L1M258942381	NonProperStrand	1	chr5	108334207	108334258	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-inf
chr1	75482648	75482723	protein_coding	Obsl1	intron	ENSMUSG00000026211	ProperStrand	23	chr13	22023036	22023062	tRNA	tRNA983-MetCAT	.	683283	ProperStrand	32	1	-16.5231
chr1	138382212	138382230	protein_coding	Kif14	intron	ENSMUSG00000041498	NonProperStrand	36	chr16	23111777	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.7618
chr16	72800514	72800532	protein_coding	Robo1	intron	ENSMUSG00000022883	NonProperStrand	188	chr4	131865867	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-0.8847
chr2	164393933	164393976	protein_coding	Wfdc2	utr3	ENSMUSG00000017723	ProperStrand	9	chr16	23110926	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-8.1007
chr15	102162238	102168210	protein_coding	Myg1	exon	ENSMUSG00000001285	ProperStrand	12	chr16	23111374	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	9	-21.6308
chr9	21602970	21602986	protein_coding	Kank2	utr5	ENSMUSG00000032194	ProperStrand	196	chr19	8799581	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-4.4610
chr19	39900867	39900957	LINE	L1Md_T	L1	chr19L1Md_T39898918	NonProperStrand	1	chr2	85534128	85534218	LINE	L1_Mur1	L1	chr2L1_Mur185532139	NonProperStrand	1	1	-inf
chr11	80965641	80965658	protein_coding	Accn1	exon	ENSMUSG00000020704	NonProperStrand	228	chr13	23831181	23831231	protein_coding	Hist1h1c	exon	ENSMUSG00000036181	ProperStrand	99	1	-9.6311
chr9	78326956	78327121	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr11	6519809	6519899	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-1.4809
chr4	14830342	14830472	protein_coding	Tmem55a	intron	ENSMUSG00000028221	ProperStrand	28	chr13	64863287	64863304	protein_coding	Cntnap3	exon	ENSMUSG00000033063	ProperStrand	87	4	-19.8862
chr8	107821615	107821664	protein_coding	E2f4	utr5	ENSMUSG00000014859	ProperStrand	32	chr7	117166820	117166859	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-6.0468
chr17	34727760	34727777	protein_coding	Gpsm3	exon	ENSMUSG00000034786	ProperStrand	12	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-14.9682
chr4	116366366	116366436	protein_coding	Prdx1	exon	ENSMUSG00000028691	ProperStrand	41	chr1	89681199	89681289	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-6.1900
chr9	64024930	64024998	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	chr7	116663634	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	5	-1.7029
chr17	27236036	27236052	protein_coding	Itpr3	exon	ENSMUSG00000042644	ProperStrand	137	chr13	101541067	101541088	protein_coding	Cenph	intron	ENSMUSG00000045273	NonProperStrand	45	1	-12.2367
chr7	120047988	120048014	protein_coding	Tead1	utr3	ENSMUSG00000055593	ProperStrand	15	chr7	51505224	51505308	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	4	-20.4183
chr19	8799597	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	chr16	38158126	38158226	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	1	-2.3874
chrX	70237450	70237472	miRNA	Mir2137	.	ENSMUSG00000089357	ProperStrand	50	chr7	151593978	151595379	protein_coding	Shank2	exon	ENSMUSG00000037541	ProperStrand	11	1	-17.1347
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr9	57385425	57385441	protein_coding	2310046O06Rik	utr5	ENSMUSG00000032305	ProperStrand	135	1	-7.0998
chr1	53924798	53924815	protein_coding	Hecw2	intron	ENSMUSG00000042807	ProperStrand	39	chr7	29136550	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.1194
chr1	152279966	152279993	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	chr11	97872610	97872710	protein_coding	Cacnb1	intron	ENSMUSG00000020882	ProperStrand	6	1	-13.6675
chr17	35646933	35646978	protein_coding	Pou5f1	exon	ENSMUSG00000024406	ProperStrand	104	chr10	127521199	127521269	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	1	-7.6954
chr18	78226835	78227081	protein_coding	5430411K18Rik	exon	ENSMUSG00000039840	ProperStrand	17	chr3	123210905	123210985	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	4	-14.2640
chr14	32189084	32189101	protein_coding	Sh3bp5	intron	ENSMUSG00000021892	NonProperStrand	2	chr16	23110916	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr13	23653996	23654086	protein_coding	Hist1h3e	exon	ENSMUSG00000069273	ProperStrand	30	chr3	95980329	95980409	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-8.2453
chr1	95488996	95489086	protein_coding	Farp2	intron	ENSMUSG00000034066	ProperStrand	5	chr18	35716764	35716844	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-11.6367
chr7	71309153	71309173	protein_coding	Trpm1	intron	ENSMUSG00000030523	NonProperStrand	6	chr18	35342191	35381736	protein_coding	Ctnna1	exon	ENSMUSG00000037815	ProperStrand	115	1	-16.7352
chr11	115941642	115941913	protein_coding	Wbp2	exon	ENSMUSG00000034341	ProperStrand	39	chr16	23111392	23111444	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.9006
chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	chr2	130101971	130102104	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	3	-2.4471
chr19	7568960	7569041	protein_coding	Atl3	utr5	ENSMUSG00000024759	ProperStrand	21	chrX	34622930	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-5.1646
chr3	152450610	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	chr4	88817918	88817956	protein_coding	Mtap	intron	ENSMUSG00000062937	ProperStrand	10	1	-12.4657
chr11	4983562	4985931	protein_coding	Ewsr1	exon	ENSMUSG00000009079	ProperStrand	248	chr1	162965554	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-3.2429
chr1	39902173	39902514	LINE	L2b	L2	chr1L2b39902159	NonProperStrand	28	chr6	125052501	125052585	protein_coding	Chd4	exon	ENSMUSG00000063870	ProperStrand	303	1	-11.6084
chr8	3510814	3510855	protein_coding	Mcoln1	exon	ENSMUSG00000004567	ProperStrand	15	chr1	190267301	190267317	protein_coding	Ush2a	exon	ENSMUSG00000026609	NonProperStrand	60	1	-16.1548
chr2	20821772	20821837	protein_coding	Arhgap21	intron	ENSMUSG00000036591	ProperStrand	49	chr2	130101287	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	NonProperStrand	4	1	-20.7434
chr4	106472505	106472522	protein_coding	Acot11	intron	ENSMUSG00000034853	ProperStrand	61	chr17	23955820	23955836	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	1	-11.4410
chr11	72563942	72564032	protein_coding	Ankfy1	exon	ENSMUSG00000020790	ProperStrand	68	chr18	35716765	35716845	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.9662
chr5	45851451	45854944	protein_coding	Clrn2	exon	ENSMUSG00000049530	NonProperStrand	2	chr7	116663633	116663713	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-9.6916
chr2	26493362	26493499	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr14	76247731	76247842	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	26	-1.1929
chr13	44998497	44998597	protein_coding	Jarid2	exon	ENSMUSG00000038518	ProperStrand	372	chr1	162968450	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-2.6526
chr2	18764040	18764056	protein_coding	Pip4k2a	utr3	ENSMUSG00000026737	NonProperStrand	15	chr11	69481432	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.8683
chr1	127332176	127332207	Low_complexity	C-rich	Low_complexity	chr1C-rich127332120	NonProperStrand	6	chr19	10703648	10703752	protein_coding	Ddb1	utr3	ENSMUSG00000024740	ProperStrand	304	1	-14.8146
chr15	89132651	89132751	protein_coding	Sbf1	exon	ENSMUSG00000036529	ProperStrand	85	chr9	15118331	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	3	-7.3147
chr8	23772348	23772438	protein_coding	Ikbkb	intron	ENSMUSG00000031537	NonProperStrand	1	chr16	23110904	23110993	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	NonProperStrand	93	1	-inf
chr5	112762267	112762311	protein_coding	Tfip11	exon	ENSMUSG00000029345	ProperStrand	111	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-6.9346
chr13	79659338	79659354	LTR	RodERV21-int	ERV1	chr13RodERV21-int79658190	ProperStrand	43	chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	1	-8.4627
chr9	64024957	64024998	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	chr10	23506278	23506348	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	4	-10.2120
chr11	100243133	100244326	protein_coding	Jup	exon	ENSMUSG00000001552	ProperStrand	123	chr4	128867196	128867212	protein_coding	Yars	exon	ENSMUSG00000028811	ProperStrand	131	1	-10.3045
chr6	71844862	71847107	protein_coding	Ptcd3	exon	ENSMUSG00000063884	ProperStrand	34	chr15	71624780	71624798	snoRNA	ENSMUSG00000088895_SNORA81	.	ENSMUSG00000088895	ProperStrand	348	3	-18.9168
chr11	46009955	46012497	protein_coding	Cyfip2	exon	ENSMUSG00000020340	ProperStrand	28	chr10	9571816	9571929	snoRNA	ENSMUSG00000064609_SNORA36	.	ENSMUSG00000064609	ProperStrand	35	3	-20.2825
chr15	39659675	39673483	protein_coding	Dpys	exon	ENSMUSG00000022304	ProperStrand	27	chr16	23110839	23110941	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.3280
chr9	110796654	110796889	protein_coding	Als2cl	exon	ENSMUSG00000044037	ProperStrand	10	chr4	131908827	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.3231
chrX	96085813	96085829	protein_coding	Ophn1	utr5	ENSMUSG00000031214	ProperStrand	3	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-12.1990
chr15	25742234	25742324	protein_coding	Myo10	utr3	ENSMUSG00000022272	ProperStrand	168	chr9	15118245	15118283	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-1.7125
chr19	36190009	36190026	protein_coding	Ankrd1	exon	ENSMUSG00000024803	ProperStrand	11	chr8	129468746	129468816	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	2	-12.5901
chr16	58467186	58467226	protein_coding	Dcbld2	utr3	ENSMUSG00000035107	ProperStrand	56	chr18	35716762	35716862	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.2842
chr11	119136228	119136244	protein_coding	Gaa	exon	ENSMUSG00000025579	NonProperStrand	201	chr4	21606097	21606114	protein_coding	Prdm13	exon	ENSMUSG00000040478	ProperStrand	51	1	-11.2160
chr8	125627096	125627186	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	chr1	162966850	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	7	-inf
chr5	30441216	30442911	protein_coding	Fam59b	exon	ENSMUSG00000044576	NonProperStrand	20	chr5	121655017	121655153	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-9.6247
chr1	77501414	77501494	protein_coding	Epha4	intron	ENSMUSG00000026235	ProperStrand	57	chr16	23110531	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	9	-19.2924
chr16	57391761	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr17	23957597	23957638	protein_coding	Srrm2	utr3	ENSMUSG00000039218	ProperStrand	521	1	-3.6032
chr17	32333551	32333571	protein_coding	Brd4	utr3	ENSMUSG00000024002	ProperStrand	121	chr16	23110454	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.3597
chr8	3803253	3803343	misc_RNA	RNaseP_nuc	.	ENSMUSG00000088025	ProperStrand	328	chr11	75578593	75578617	protein_coding	Ywhae	utr3	ENSMUSG00000020849	ProperStrand	176	1	-7.7592
chr2	110497075	110497136	protein_coding	Ano3	utr3	ENSMUSG00000074968	ProperStrand	10	chr2	26768404	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	2	-14.7541
chr6	54379743	54379760	lincRNA	9130019P16Rik	exon	ENSMUSG00000073067	ProperStrand	255	chr17	66169450	66169500	protein_coding	Ppp4r1	intron	ENSMUSG00000061950	ProperStrand	46	1	-10.9480
chr2	35021224	35021314	protein_coding	Cep110	exon	ENSMUSG00000057110	ProperStrand	20	chr17	24857743	24857823	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.2966
chr6	56799655	56799702	protein_coding	Fkbp9	exon	ENSMUSG00000029781	ProperStrand	39	chr4	124736326	124736344	protein_coding	Dnali1	exon	ENSMUSG00000042707	ProperStrand	45	1	-14.7488
chr1	176857166	176857183	LINE	Lx8	L1	chr1Lx8176857148	NonProperStrand	1	chr5	149143326	149143399	protein_coding	Slc7a1	utr3	ENSMUSG00000041313	ProperStrand	65	1	-inf
chr1	33889489	33889569	LINE	Lx9	L1	chr1Lx933889109	ProperStrand	1	chr1	33889687	33889777	LINE	Lx9	L1	chr1Lx933889676	ProperStrand	1	1	-inf
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr12	36219400	36219416	protein_coding	Ahr	utr5	ENSMUSG00000019256	NonProperStrand	64	2	-7.2425
chr2	90235313	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	127456671	127456688	protein_coding	Prim1	intron	ENSMUSG00000025395	ProperStrand	12	1	-7.6663
chr19	45098691	45099320	protein_coding	Lzts2	exon	ENSMUSG00000035342	ProperStrand	14	chr1	107441040	107441057	protein_coding	Pign	intron	ENSMUSG00000056536	ProperStrand	7	1	-inf
chr3	134886193	134887940	protein_coding	Cenpe	exon	ENSMUSG00000045328	ProperStrand	71	chr16	23110911	23110991	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-3.6310
chr11	106858588	106858609	protein_coding	Kpna2	exon	ENSMUSG00000018362	ProperStrand	70	chr11	69481332	69481412	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-5.0691
chr14	71065280	71065338	protein_coding	Xpo7	utr3	ENSMUSG00000022100	ProperStrand	109	chr4	109125595	109125628	protein_coding	Rnf11	utr3	ENSMUSG00000028557	ProperStrand	9	4	-19.6989
chr8	49353550	49353570	protein_coding	Odz3	intron	ENSMUSG00000031561	NonProperStrand	9	chr12	17552954	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-8.9189
chr10	83990078	83990126	protein_coding	Ckap4	utr3	ENSMUSG00000046841	ProperStrand	60	chr18	35716736	35716844	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	6	-13.1672
chr9	44218075	44218230	protein_coding	Rps25	utr3	ENSMUSG00000009927	ProperStrand	42	chr9	15119646	15119736	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.2646
chr12	86958631	86958648	protein_coding	Jdp2	intron	ENSMUSG00000034271	ProperStrand	19	chr5	151755614	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-10.0630
chr13	18826012	18915741	protein_coding	Vps41	exon	ENSMUSG00000041236	ProperStrand	31	chr16	23110864	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.0160
chr2	90235321	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	134939738	134939849	protein_coding	Setd1a	exon	ENSMUSG00000042308	ProperStrand	58	1	-4.5275
chr2	32818841	32818941	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	chr1	59748825	59748856	snoRNA	ENSMUSG00000077345_Snord70	.	ENSMUSG00000077345	ProperStrand	61	5	-19.0481
chr1	56997556	56997573	protein_coding	Satb2	intron	ENSMUSG00000038331	NonProperStrand	24	chrX	84483702	84483718	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-10.0981
chr19	8798484	8798553	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	chr12	44844110	44844157	snoRNA	ENSMUSG00000065004_SNORA33	.	ENSMUSG00000065004	ProperStrand	111	1	-4.0345
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr2	31924012	31924028	protein_coding	Fam78a	utr3	ENSMUSG00000050592	NonProperStrand	340	2	-4.6323
chr4	43505798	43505898	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr13	21871931	21872004	protein_coding	Hist1h1b	exon	ENSMUSG00000058773	ProperStrand	65	10	-inf
chr19	40389181	40392525	protein_coding	Sorbs1	exon	ENSMUSG00000025006	ProperStrand	25	chr15	5068428	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-7.8147
chr11	88006867	88007008	protein_coding	Cuedc1	utr3	ENSMUSG00000018378	NonProperStrand	20	chr2	30985931	30985949	protein_coding	Fnbp1	intron	ENSMUSG00000075415	ProperStrand	53	1	-15.7761
chr1	75484537	75484553	protein_coding	Obsl1	exon	ENSMUSG00000026211	NonProperStrand	192	chr15	79913288	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-1.6143
chr11	101321185	101321269	protein_coding	Vat1	utr3	ENSMUSG00000034993	ProperStrand	69	chrX	113862541	113862570	snoRNA	ENSMUSG00000088518_SNORA9	.	ENSMUSG00000088518	ProperStrand	280	3	-inf
chr17	4082263	4082287	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr12	87846868	87847383	protein_coding	Esrrb	exon	ENSMUSG00000021255	ProperStrand	254	3	-15.9428
chr14	79099879	79099897	protein_coding	Dgkh	intron	ENSMUSG00000034731	NonProperStrand	8	chr11	6428089	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-7.1562
chr6	119521622	119521638	protein_coding	Erc1	utr3	ENSMUSG00000030172	ProperStrand	69	chr9	15119363	15119425	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	2	-7.9989
chr3	70447695	70447775	LINE	Lx2	L1	chr3Lx270447558	ProperStrand	1	chr3	70311236	70311326	LINE	Lx6	L1	chr3Lx670310924	ProperStrand	1	1	-inf
mmu-miR-690	1	20	miRNA	mmu-miR-690	.	mmu-miR-690	ProperStrand	63	chr10	23505152	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.1674
chr5	74489215	74489272	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr6	83318070	83318086	protein_coding	Tet3	exon	ENSMUSG00000034832	NonProperStrand	93	1	-4.7714
chr3	14663443	14663470	LINE	Lx	L1	chr3Lx14663027	NonProperStrand	1	chr11	52909851	52909868	protein_coding	Fstl4	intron	ENSMUSG00000036264	NonProperStrand	8	1	-inf
chr7	13594771	13594787	protein_coding	Zbtb45	intron	ENSMUSG00000049600	ProperStrand	16	chr15	82980083	82980158	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-9.8107
chr4	116826700	116826739	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	chr16	43886801	43886848	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	3	-5.3154
chr19	39917317	39917333	protein_coding	Cyp2c69	utr3	ENSMUSG00000092008	NonProperStrand	83	chr12	106269480	106269556	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-3.5346
chr13	107697795	107697885	protein_coding	Ipo11	intron	ENSMUSG00000042590	ProperStrand	120	chr7	51505224	51505303	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	1	-6.7729
chrX	19683228	19683244	protein_coding	Slc9a7	exon	ENSMUSG00000037341	NonProperStrand	136	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-4.2622
chr14	32515209	32515263	protein_coding	Ankrd28	exon	ENSMUSG00000014496	ProperStrand	39	chr11	119965850	119965930	protein_coding	Slc38a10	utr3	ENSMUSG00000061306	ProperStrand	91	7	-19.9707
chrX	6734345	6734388	protein_coding	Clcn5	utr3	ENSMUSG00000004317	ProperStrand	7	chr9	15118245	15118317	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-7.7405
chr15	103122146	103122184	protein_coding	Copz1	intron	ENSMUSG00000060992	ProperStrand	45	chr4	131865927	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-3.9969
chrX	110212900	110212990	protein_coding	Chm	intron	ENSMUSG00000025531	NonProperStrand	3	chr8	35999952	36000042	protein_coding	Tnks	intron	ENSMUSG00000031529	ProperStrand	37	1	-20.6471
chr16	23111770	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	chr16	32243887	32243943	snoRNA	ENSMUSG00000080440_SNORA79	.	ENSMUSG00000080440	ProperStrand	140	2	-1.5415
chr9	88419023	88419041	SINE	B4	B4	chr9B488418988	ProperStrand	75	chr8	73419657	73419712	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.7342
chr19	45409733	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr1	89673711	89673776	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	3	-1.0033
chr12	111930505	111932789	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr17	39985194	39985648	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	8	-14.2282
chr7	125306678	125306775	protein_coding	Smg1	exon	ENSMUSG00000030655	ProperStrand	70	chr11	48616645	48616706	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	1	-9.0371
chr17	36298906	36298923	protein_coding	2410017I17Rik	exon	ENSMUSG00000038311	NonProperStrand	3	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.6896
chr12	69635012	69635102	LINE	L1VL4	L1	chr12L1VL469632992	ProperStrand	1	chr4	4397542	4397622	LINE	Lx2	L1	chr4Lx24397263	ProperStrand	1	1	-inf
chr12	58691976	58691992	antisense	4921518K17Rik	.	ENSMUSG00000085851	ProperStrand	75	chr11	45665684	45665749	protein_coding	Clint1	intron	ENSMUSG00000006169	ProperStrand	19	1	-15.2100
chr2	162890147	162890223	protein_coding	Mybl2	exon	ENSMUSG00000017861	ProperStrand	230	chr19	8800449	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-1.3050
chr12	44844130	44844156	snoRNA	ENSMUSG00000065004_SNORA33	.	ENSMUSG00000065004	ProperStrand	111	chr3	108357255	108357355	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-3.3881
chr10	62802344	62802360	protein_coding	Sirt1	intron	ENSMUSG00000020063	NonProperStrand	116	chr8	13416894	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-5.1632
chr10	79756400	79756826	protein_coding	Rps15	utr3	ENSMUSG00000063457	ProperStrand	119	chr18	73693110	73693186	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	5	-16.9392
chr8	44380126	44380169	SINE	B1_Mur1	Alu	chr8B1_Mur144380064	ProperStrand	2	chr16	23111374	23111464	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-inf
chr5	92875347	92875364	protein_coding	Scarb2	exon	ENSMUSG00000029426	ProperStrand	30	chr2	166889035	166889055	snoRNA	ENSMUSG00000077515_SNORD12	.	ENSMUSG00000077515	ProperStrand	191	1	-12.3919
chr2	38012954	38012970	protein_coding	Dennd1a	intron	ENSMUSG00000035392	NonProperStrand	128	chr7	29136525	29136575	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.2033
chr3	96654255	96654271	protein_coding	Pdzk1	exon	ENSMUSG00000038298	ProperStrand	101	chr7	116663633	116663710	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.6672
chr1	93263065	93263081	protein_coding	Fam132b	exon	ENSMUSG00000047443	NonProperStrand	98	chrX	34622906	34623012	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	5	-10.9814
chr11	33059949	33062997	protein_coding	Npm1	exon	ENSMUSG00000057113	ProperStrand	352	chr9	15119639	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-1.3467
chr7	51505826	51505906	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	chr6	71832550	71832640	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-1.4350
chr9	22272677	22272695	protein_coding	Rp9	utr5	ENSMUSG00000032239	NonProperStrand	1	chr16	23110959	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr8	126441405	126441421	protein_coding	Nup133	exon	ENSMUSG00000039509	ProperStrand	59	chr1	9932561	9932625	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-7.7630
chr13	9833551	9833686	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr7	26057527	26057544	protein_coding	Cic	exon	ENSMUSG00000005442	ProperStrand	80	1	-4.4022
chr8	81343426	81343507	protein_coding	Lsm6	intron	ENSMUSG00000031683	ProperStrand	13	chr17	35087919	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-8.2652
chr10	77468220	77472382	protein_coding	Pfkl	exon	ENSMUSG00000020277	ProperStrand	179	chr15	98361779	98361811	protein_coding	2310037I24Rik	exon	ENSMUSG00000022992	ProperStrand	91	1	-10.2835
chr8	108233712	108233730	protein_coding	4933405L10Rik	exon	ENSMUSG00000013158	ProperStrand	94	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	11	-7.6455
chr8	11635714	11635732	protein_coding	Ankrd10	utr5	ENSMUSG00000031508	ProperStrand	32	chr18	63908609	63908625	protein_coding	Wdr7	intron	ENSMUSG00000040560	NonProperStrand	180	1	-12.3800
chr15	78866725	78866784	protein_coding	Gcat	exon	ENSMUSG00000006378	ProperStrand	15	chr18	35716858	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.7126
chr4	97812275	97812291	protein_coding	Nfia	intron	ENSMUSG00000028565	NonProperStrand	74	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.4533
chr18	38610730	38610748	protein_coding	Ndfip1	intron	ENSMUSG00000024425	ProperStrand	42	chr1	34282564	34282615	protein_coding	Dst	exon	ENSMUSG00000026131	ProperStrand	461	2	-15.7025
chr9	50816824	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	chr1	93342189	93345290	protein_coding	Per2	exon	ENSMUSG00000055866	ProperStrand	114	1	-10.5188
chr2	165654183	165658819	protein_coding	Zmynd8	exon	ENSMUSG00000039671	NonProperStrand	23	chr16	23111704	23111794	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.5778
chr2	26494708	26494828	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	chr9	15118545	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	3	-1.4732
chrX	158217188	158217206	protein_coding	Rai2	utr3	ENSMUSG00000043518	ProperStrand	4	chr1	162967489	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	3	-19.8676
chr3	144098493	144098509	protein_coding	Hs2st1	exon	ENSMUSG00000040151	ProperStrand	18	chr17	39985318	39985425	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-8.3455
chr8	64017612	64028375	protein_coding	Palld	exon	ENSMUSG00000058056	NonProperStrand	125	chr7	116663673	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.3553
chr6	116584610	116584626	protein_coding	Rassf4	utr3	ENSMUSG00000042129	NonProperStrand	11	chr1	162965534	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-6.5834
chr5	123622050	123622066	protein_coding	Hpd	exon	ENSMUSG00000029445	ProperStrand	254	chr1	162965531	162965588	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-3.1701
chr10	72437415	72437431	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr9	64025741	64025807	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	2	-6.4069
chr16	75761550	75765200	protein_coding	Hspa13	exon	ENSMUSG00000032932	NonProperStrand	57	chr9	120038553	120038619	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.1312
chr12	82051091	82051142	protein_coding	Srsf5	utr3	ENSMUSG00000021134	ProperStrand	68	chr15	99433433	99433451	protein_coding	Aqp6	exon	ENSMUSG00000043144	NonProperStrand	45	1	-13.6388
chr10	80639429	80640446	protein_coding	Eef2	utr5	ENSMUSG00000034994	ProperStrand	2244	chr10	87591934	87591997	protein_coding	4930547N16Rik	intron	ENSMUSG00000035365	ProperStrand	4	1	-11.7428
chr1	54251853	54251870	protein_coding	Hecw2	utr5	ENSMUSG00000042807	ProperStrand	39	chr2	26494708	26494826	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.9010
chr7	17425956	17426046	protein_coding	Strn4	utr3	ENSMUSG00000030374	ProperStrand	12	chr9	15119648	15119728	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.6882
chr7	13510943	13511164	protein_coding	Rps5	exon	ENSMUSG00000012848	ProperStrand	108	chr6	83106529	83106547	protein_coding	1700003E16Rik	utr5	ENSMUSG00000030030	NonProperStrand	2	1	-19.8743
chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	chr4	116826719	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-3.0928
chr11	97950763	97950851	protein_coding	Fbxl20	utr3	ENSMUSG00000020883	ProperStrand	23	chr4	57706987	57707003	protein_coding	Palm2	intron	ENSMUSG00000090053	NonProperStrand	187	1	-12.9749
chr10	127947624	127947641	protein_coding	Esyt1	utr3	ENSMUSG00000025366	NonProperStrand	32	chr12	85676468	85676492	protein_coding	Zfp410	intron	ENSMUSG00000042472	ProperStrand	6	1	-18.5075
chr3	88363975	88364008	protein_coding	Ubqln4	intron	ENSMUSG00000008604	ProperStrand	49	chr16	23110538	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.8132
chr5	145565646	145565858	protein_coding	Trrap	exon	ENSMUSG00000045482	ProperStrand	399	chr14	76247742	76247822	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-1.0333
chr1	182517400	182517456	protein_coding	Parp1	exon	ENSMUSG00000026496	ProperStrand	227	chr6	124665483	124665521	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	3	-10.4084
chr6	83111875	83111891	protein_coding	1700003E16Rik	exon	ENSMUSG00000030030	ProperStrand	352	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-2.5397
chr16	18875427	18875445	protein_coding	Mrpl40	exon	ENSMUSG00000022706	ProperStrand	2	chr7	29073210	29073330	protein_coding	BC089491	exon	ENSMUSG00000046750	ProperStrand	62	1	-inf
chr8	114194626	114194667	protein_coding	Zfp1	utr3	ENSMUSG00000055835	ProperStrand	11	chr11	69483136	69483181	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-9.3712
chr8	98270014	98270082	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	chr7	52382234	52382298	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-1.1559
chr5	93472096	93472164	protein_coding	Sowahb	exon	ENSMUSG00000045314	NonProperStrand	2	chr8	73419657	73419732	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	NonProperStrand	53	2	-inf
chr2	116793778	116793818	snRNA	ENSMUSG00000065794_U1	.	ENSMUSG00000065794	ProperStrand	5	chr18	75160710	75160776	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	2	-19.6037
chr4	154351039	154351076	protein_coding	Pank4	intron	ENSMUSG00000029056	ProperStrand	15	chr5	74489593	74489669	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-6.4878
chr2	90235296	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	139482849	139482865	lincRNA	4933427I22Rik	exon	ENSMUSG00000085928	ProperStrand	62	2	-7.3354
chr15	103026829	103026845	protein_coding	Cbx5	utr3	ENSMUSG00000009575	ProperStrand	98	chr18	35714157	35714257	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-2.5693
chr13	113341825	113341842	protein_coding	Il31ra	intron	ENSMUSG00000050377	NonProperStrand	2	chr1	72290909	72290973	snRNA	ENSMUSG00000093111_AC120136.1	.	ENSMUSG00000093111	ProperStrand	137	1	-20.7670
chr12	70474841	70474895	protein_coding	Arf6	utr3	ENSMUSG00000044147	ProperStrand	32	chr11	106362337	106362378	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	2	-11.4259
chr11	69265883	69265900	antisense	6030455H03Rik	.	ENSMUSG00000086591	ProperStrand	6	chr9	15119651	15119697	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-7.1405
chr2	23011328	23011344	protein_coding	Mastl	exon	ENSMUSG00000026779	ProperStrand	60	chr10	23505153	23505187	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.2332
chr18	75529032	75529087	protein_coding	Smad7	exon	ENSMUSG00000025880	ProperStrand	83	chr1	168239525	168239541	protein_coding	Ildr2	exon	ENSMUSG00000040612	ProperStrand	103	1	-11.5751
chr5	77710438	77710564	protein_coding	Rest	exon	ENSMUSG00000029249	ProperStrand	136	chr9	61221143	61221159	protein_coding	Tle3	utr5	ENSMUSG00000032280	NonProperStrand	10	1	-15.3218
chr4	68423440	68423457	protein_coding	Dbc1	exon	ENSMUSG00000028351	ProperStrand	78	chr1	5114360	5114377	protein_coding	Atp6v1h	exon	ENSMUSG00000033793	ProperStrand	20	1	-15.0134
chr7	119785308	119785329	lincRNA	2310014F06Rik	intron	ENSMUSG00000085945	NonProperStrand	25	chr5	53035029	53035106	protein_coding	Sepsecs	utr3	ENSMUSG00000029173	ProperStrand	7	1	-20.1995
chr14	66016486	66016575	protein_coding	Zfp395	utr3	ENSMUSG00000034522	ProperStrand	15	chr4	131865382	131865462	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-6.7250
chr12	73217173	73217201	protein_coding	4930403N07Rik	intron	ENSMUSG00000021086	NonProperStrand	10	chr19	38049082	38049412	protein_coding	Myof	exon	ENSMUSG00000048612	ProperStrand	37	6	-19.3381
chr17	46963015	46966903	protein_coding	BC032203	exon	ENSMUSG00000036568	ProperStrand	64	chr15	82725599	82725637	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	6	-19.4944
chr5	143648750	143650352	protein_coding	Fbxl18	exon	ENSMUSG00000066640	ProperStrand	64	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-7.0746
chr7	16902761	16902777	protein_coding	Bbc3	utr3	ENSMUSG00000002083	ProperStrand	9	chr2	26494763	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-6.8145
chr2	125072925	125072943	protein_coding	Dut	utr5	ENSMUSG00000027203	ProperStrand	18	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-5.9221
chr19	8799046	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	chr11	77995189	77995257	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	5	-2.6843
chr1	40060647	40060683	protein_coding	Map4k4	exon	ENSMUSG00000026074	ProperStrand	348	chr19	8798497	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-2.0200
chr11	69136568	69136637	protein_coding	Cntrob	utr5	ENSMUSG00000032782	ProperStrand	19	chr11	68886928	68887018	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-6.3948
chr2	90235304	90235345	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	129866390	129866408	protein_coding	Zranb3	intron	ENSMUSG00000036086	ProperStrand	19	1	-6.7268
chr5	130295414	130295505	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	chr1	162967734	162967806	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	5	-11.2808
chr8	125418803	125418819	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	chr4	131826012	131826060	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	1	-5.5623
chr13	9833561	9833615	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr2	25421638	25421655	protein_coding	Mamdc4	exon	ENSMUSG00000026941	ProperStrand	11	1	-8.3583
chr8	23801534	23801550	protein_coding	Ikbkb	exon	ENSMUSG00000031537	ProperStrand	11	chr2	26494708	26494759	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-10.4856
chr5	121655126	121655513	protein_coding	Rpl6	exon	ENSMUSG00000029614	ProperStrand	332	chr17	24857716	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	5	-2.5323
chr13	94893712	94893802	protein_coding-noncoding	Lhfpl2	utr5	ENSMUSG00000045312	ProperStrand	1	chr13	94893862	94893952	protein_coding	Lhfpl2	intron	ENSMUSG00000045312	ProperStrand	37	1	-inf
chr15	85699191	85699212	protein_coding	Gtse1	exon	ENSMUSG00000022385	NonProperStrand	3	chr14	31827478	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-13.2966
chr7	30231493	30231593	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	chr19	8799587	8799644	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-2.5546
chr7	134671402	134671492	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	chr5	108334247	108334326	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	2	-1.1004
chr10	79538924	79539016	protein_coding	Sbno2	intron	ENSMUSG00000035673	ProperStrand	23	chr19	9018593	9020258	protein_coding	Mta2	exon	ENSMUSG00000071646	ProperStrand	70	1	-14.9461
chr6	91025961	91026604	protein_coding	Nup210	exon	ENSMUSG00000030091	ProperStrand	140	chr5	130300439	130300529	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.1977
chr15	80840879	80840896	protein_coding	Sgsm3	exon	ENSMUSG00000042303	NonProperStrand	2	chr16	57391625	57391717	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	1	-17.8932
chr9	120039661	120039688	protein_coding	Rpsa	intron	ENSMUSG00000032518	ProperStrand	398	chr2	144087332	144087452	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	5	-12.9779
chr10	36694482	36694579	protein_coding	Hdac2	utr5	ENSMUSG00000019777	ProperStrand	36	chr7	148634777	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-4.9644
chr14	20598804	20598825	protein_coding	Nid2	exon	ENSMUSG00000021806	ProperStrand	372	chr4	149619388	149620720	protein_coding	Eno1	exon	ENSMUSG00000063524	ProperStrand	432	1	-5.7427
chr11	51781253	51781285	protein_coding	Cdkn2aipnl	exon	ENSMUSG00000020392	ProperStrand	18	chr4	131908689	131908751	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.1942
chr18	68474313	68474366	protein_coding-noncoding	Rnmt	utr5	ENSMUSG00000009535	ProperStrand	1	chr3	87067406	87067423	protein_coding	Fcrls	utr5	ENSMUSG00000015852	ProperStrand	3	1	-inf
chr11	3025937	3026024	pseudogene	Pisd-ps1	.	ENSMUSG00000082286	ProperStrand	14	chr14	33005038	33005079	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	8	-inf
chr9	72853646	72858105	protein_coding	Ccpg1	exon	ENSMUSG00000034563	ProperStrand	8	chr4	131865855	131865925	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.4974
chr5	33333918	33334008	protein_coding	Depdc5	utr3	ENSMUSG00000037426	ProperStrand	26	chr5	130300471	130300551	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.0304
chr8	74446729	74446745	protein_coding	Zfp617	intron	ENSMUSG00000066880	NonProperStrand	208	chr1	63225253	63225284	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	1	-6.3659
chr1	153602594	153602610	protein_coding	Edem3	utr5	ENSMUSG00000043019	ProperStrand	84	chr5	121655127	121655154	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.1314
chr11	68199391	68199409	protein_coding	Ntn1	exon	ENSMUSG00000020902	ProperStrand	44	chr18	35714217	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-6.7669
chr17	35089182	35089200	processed_transcript	1110038B12Rik	.	ENSMUSG00000092203	ProperStrand	126	chr2	26494715	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.8501
chr19	5051417	5051433	protein_coding	Rin1	exon	ENSMUSG00000024883	ProperStrand	1	chr14	66539969	66539985	protein_coding	Scara3	exon	ENSMUSG00000034463	ProperStrand	8	1	-inf
chr13	3610147	3610230	protein_coding	BC016423	utr5	ENSMUSG00000033799	ProperStrand	15	chr6	38461893	38461909	protein_coding	Ubn2	utr3	ENSMUSG00000038538	ProperStrand	86	1	-15.4124
chr1	74542429	74542497	protein_coding	Usp37	intron	ENSMUSG00000033364	ProperStrand	47	chr9	120037899	120037989	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-5.1786
chr17	95160910	95218243	Satellite	MMSAT4	Satellite	chr17MMSAT495216724	NonProperStrand	14	chr7	116664811	116664901	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-5.2856
chr10	127483807	127484751	protein_coding	Naca	exon	ENSMUSG00000061315	ProperStrand	50	chr16	23110550	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.7776
chr6	91988353	91988453	protein_coding	Fgd5	intron	ENSMUSG00000034037	ProperStrand	38	chr19	8798515	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-6.1084
chr2	90235313	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	104629625	104629641	protein_coding	Ints4	exon	ENSMUSG00000025133	ProperStrand	19	1	-6.7268
chr11	51807868	51807931	protein_coding	Ube2b	intron	ENSMUSG00000020390	ProperStrand	57	chr4	131908809	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.2943
chr2	156130544	156133091	protein_coding	Phf20	exon	ENSMUSG00000038116	ProperStrand	60	chr1	162967530	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-3.4744
chr6	91673918	91708048	protein_coding	Slc6a6	utr3	ENSMUSG00000030096	ProperStrand	206	chr16	23110963	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	8	-0.7494
chr14	76816904	76906793	protein_coding	Tsc22d1	utr3	ENSMUSG00000022010	ProperStrand	86	chr16	23111754	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-2.5866
chr19	18745546	18745670	protein_coding	2410127L17Rik	exon	ENSMUSG00000024726	ProperStrand	43	chr10	126778582	126778599	protein_coding	Gli1	intron	ENSMUSG00000025407	ProperStrand	48	1	-14.4386
chr14	70183466	70183546	protein_coding	Tnfrsf10b	utr3	ENSMUSG00000022074	ProperStrand	57	chr18	34862997	34863089	protein_coding	Gfra3	intron	ENSMUSG00000024366	NonProperStrand	2	1	-inf
chr9	105370924	105370998	protein_coding	Atp2c1	intron	ENSMUSG00000032570	ProperStrand	21	chr17	6943614	6943663	protein_coding	Ezr	utr3	ENSMUSG00000052397	ProperStrand	126	5	-19.3986
chr4	140278142	140278232	protein_coding	Rcc2	utr3	ENSMUSG00000040945	ProperStrand	228	chr19	8963096	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	7	-6.6913
chr7	34992727	34992915	protein_coding	Gpi1	exon	ENSMUSG00000036427	ProperStrand	288	chr5	108334193	108334273	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-1.9972
chr10	127796259	127796345	protein_coding	Cs	exon	ENSMUSG00000005683	ProperStrand	63	chr9	30235085	30235102	protein_coding	Snx19	exon	ENSMUSG00000031993	ProperStrand	353	1	-9.6651
chr8	86488949	86488987	protein_coding	Asf1b	exon	ENSMUSG00000005470	ProperStrand	14	chr3	46250662	46250678	protein_coding	Pabpc4l	exon	ENSMUSG00000090919	ProperStrand	137	1	-14.6234
chr8	96504241	96504272	protein_coding	Amfr	exon	ENSMUSG00000031751	ProperStrand	26	chr10	89512698	89512714	protein_coding	Anks1b	exon	ENSMUSG00000058589	ProperStrand	68	1	-14.7564
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr8	46122689	46122809	protein_coding	Fat1	exon	ENSMUSG00000070047	ProperStrand	306	2	-5.5713
chr6	17153731	17153774	lincRNA	D830026I12Rik	intron	ENSMUSG00000085171	NonProperStrand	1	chr4	131865380	131865480	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-inf
chr11	68599134	68599221	protein_coding	Myh10	exon	ENSMUSG00000020900	ProperStrand	91	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.8718
chr2	112219813	112219829	protein_coding	2410042D21Rik	intron	ENSMUSG00000027132	ProperStrand	10	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-11.3948
chr15	98350227	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	chr19	8799597	8799644	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	6	-2.5383
chr11	3070144	3070161	protein_coding	Sfi1	intron	ENSMUSG00000023764	ProperStrand	17	chr11	77995189	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	3	-19.3956
chr14	55233254	55235377	protein_coding	Psmb5	exon	ENSMUSG00000022193	ProperStrand	14	chr4	131908361	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.9265
chr17	35148181	35148399	protein_coding	Vars	exon	ENSMUSG00000007029	ProperStrand	121	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	5	-7.3256
chr3	52388277	52388294	SINE	B4A	B4	chr3B4A52388218	ProperStrand	169	chr11	53587317	53587433	protein_coding	Irf1	exon	ENSMUSG00000018899	ProperStrand	17	1	-13.7985
chr4	46484289	46484998	protein_coding	Anp32b	exon	ENSMUSG00000028333	ProperStrand	229	chr15	34370594	34370674	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	14	-22.4800
chr5	38928378	38928410	protein_coding	Wdr1	exon	ENSMUSG00000005103	ProperStrand	16	chr4	131908357	131908410	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-6.2934
chr12	25396538	25396555	protein_coding	Rrm2	exon	ENSMUSG00000020649	ProperStrand	65	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.1423
chr6	136709185	136709201	protein_coding	Gucy2c	exon	ENSMUSG00000042638	NonProperStrand	21	chr12	110887828	110887893	snoRNA	ENSMUSG00000084549_SNORD113	.	ENSMUSG00000084549	ProperStrand	196	1	-13.0688
chr10	12912033	12912912	protein_coding	Ltv1	utr5	ENSMUSG00000019814	ProperStrand	76	chr19	8798517	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-7.8695
chr5	136611800	136611816	protein_coding	Lrwd1	exon	ENSMUSG00000029703	NonProperStrand	51	chr2	158451026	158451044	protein_coding	Actr5	exon	ENSMUSG00000037761	NonProperStrand	94	1	-12.7386
chr8	35882498	35882515	protein_coding	Dusp4	utr3	ENSMUSG00000031530	NonProperStrand	3	chr7	35005928	35012189	protein_coding	Gpi1	exon	ENSMUSG00000036427	ProperStrand	288	1	-16.5573
chr10	53718541	53718558	protein_coding	Man1a	intron	ENSMUSG00000003746	ProperStrand	16	chr5	130300420	130300477	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.9748
chr2	3693068	3693084	protein_coding	Fam107b	intron	ENSMUSG00000026655	NonProperStrand	15	chr16	23111448	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.5828
chr15	75888115	75888143	protein_coding	Scrib	exon	ENSMUSG00000022568	ProperStrand	154	chr18	33954826	33954942	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	5	-9.4611
chr13	23855874	23855904	protein_coding	Hist1h1a	exon	ENSMUSG00000049539	ProperStrand	34	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.8923
chr14	45972080	45972115	protein_coding	Styx	intron	ENSMUSG00000053205	ProperStrand	4	chr7	116664868	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-13.2234
chr8	107829108	107829133	protein_coding	E2f4	utr3	ENSMUSG00000014859	ProperStrand	32	chr4	153410349	153410365	protein_coding	Ccdc27	exon	ENSMUSG00000039492	ProperStrand	94	1	-13.6789
chr2	90235295	90235345	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	96412508	96412526	protein_coding	Gm12695	intron	ENSMUSG00000078639	ProperStrand	110	3	-8.3351
chr7	150717298	150717349	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	chr1	162968445	162968482	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	3	-0.7512
chr17	46861595	46861611	protein_coding	Pex6	exon	ENSMUSG00000002763	ProperStrand	292	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	4	-14.5577
chr13	38437787	38437804	protein_coding	Bmp6	utr5	ENSMUSG00000039004	NonProperStrand	3	chr13	35832997	35833014	protein_coding	Cdyl	intron	ENSMUSG00000059288	NonProperStrand	9	1	-inf
chr1	140382253	140382352	protein_coding	Nek7	utr3	ENSMUSG00000026393	ProperStrand	10	chr10	23505152	23505209	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.3364
chr4	131399490	131399506	protein_coding	Mecr	exon	ENSMUSG00000028910	NonProperStrand	109	chr17	35087894	35087946	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	2	-6.8032
chr7	13516173	13516196	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr18	80488007	80488024	protein_coding	Pqlc1	intron	ENSMUSG00000034006	NonProperStrand	6	1	-13.4237
chr11	62416574	62418036	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr4	131866155	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	10	-11.0661
chr7	118214192	118214208	protein_coding	Eif4g2	utr3	ENSMUSG00000005610	NonProperStrand	30	chr3	68889150	68889231	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	4	-14.5791
chr4	132530099	132530117	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	chr17	24665420	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	2	-3.0483
chr2	30666061	30666151	protein_coding	Mettl11a	intron	ENSMUSG00000026857	ProperStrand	51	chr15	98350203	98350283	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	3	-11.9604
chr15	103175773	103176414	protein_coding	Itga5	exon	ENSMUSG00000000555	ProperStrand	28	chr4	131865411	131865516	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-5.4736
chr5	38621874	38621974	protein_coding	Lyar	exon	ENSMUSG00000067367	ProperStrand	33	chr5	74489597	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-4.9189
chr8	85534039	85534055	protein_coding	Rnf150	intron	ENSMUSG00000047747	NonProperStrand	4	chrX	34622981	34623036	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-8.6589
chr4	106111664	106111770	protein_coding	Usp24	utr3	ENSMUSG00000028514	ProperStrand	74	chr18	35102297	35102343	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-6.1757
chr10	127927994	127928039	protein_coding	Myl6	utr3	ENSMUSG00000090841	ProperStrand	22	chr19	8799020	8799089	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	10	-20.9224
chr2	128806354	128806444	protein_coding	Zc3h6	intron	ENSMUSG00000042851	ProperStrand	8	chr2	129094730	129094810	protein_coding	Ckap2l	utr3	ENSMUSG00000048327	NonProperStrand	3	1	-21.9894
chr15	58884095	58884113	protein_coding	Mtss1	intron	ENSMUSG00000022353	NonProperStrand	51	chr4	69927944	69927976	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	1	-8.4349
chr5	100855902	100855974	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr15	79913287	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	8	-1.1693
chr11	53292296	53292313	protein_coding	Sowaha	exon	ENSMUSG00000044352	ProperStrand	1	chr16	38347206	38347229	protein_coding	Cox17	exon	ENSMUSG00000046516	ProperStrand	5	1	-inf
chr2	59708556	59708573	protein_coding	Wdsub1	intron	ENSMUSG00000026988	NonProperStrand	1	chr16	23110828	23110859	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr7	52251948	52251965	protein_coding	Bcl2l12	exon	ENSMUSG00000003190	NonProperStrand	7	chr5	31830580	31833020	protein_coding	Slc4a1ap	exon	ENSMUSG00000029141	ProperStrand	9	1	-19.9681
chr5	108330909	108331046	protein_coding	Rpl5	exon	ENSMUSG00000058558	ProperStrand	235	chr5	121655019	121655109	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-1.4414
chr19	46139014	46141776	protein_coding	Pprc1	exon	ENSMUSG00000055491	ProperStrand	143	chr16	23110455	23110550	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-2.2004
chr16	57391758	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr5	121655052	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	8	-4.2440
chr12	21395980	21396643	protein_coding	Ywhaq	utr3	ENSMUSG00000076432	ProperStrand	70	chr4	131908687	131908787	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-3.2760
chr8	111621098	111621119	lincRNA	D030068K23Rik	intron	ENSMUSG00000085859	ProperStrand	21	chr2	57900146	57900162	protein_coding	Ermn	utr3	ENSMUSG00000026830	ProperStrand	27	1	-17.0450
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr11	105224418	105224437	protein_coding	March10	intron	ENSMUSG00000078627	NonProperStrand	3	1	-14.9656
chr7	13508357	13508374	protein_coding	Rps5	exon	ENSMUSG00000012848	ProperStrand	108	chr6	83318070	83318086	protein_coding	Tet3	exon	ENSMUSG00000034832	NonProperStrand	93	1	-11.2519
chr9	106363711	106364227	protein_coding	Pcbp4	exon	ENSMUSG00000023495	NonProperStrand	2	chr9	120038573	120038672	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	NonProperStrand	28	1	-20.1779
chr9	63066908	63066926	protein_coding	Map2k5	intron	ENSMUSG00000058444	NonProperStrand	79	chr7	52382234	52382259	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-7.7340
chr12	101350546	101354098	protein_coding	Psmc1	exon	ENSMUSG00000021178	ProperStrand	14	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-6.1935
chr11	20012669	20012691	protein_coding	Actr2	intron	ENSMUSG00000020152	NonProperStrand	17	chr4	131908689	131908739	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.3002
chr16	23110455	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	chr3	88497863	88497980	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	18	-5.9484
chr16	22382944	22382983	protein_coding	Etv5	utr3	ENSMUSG00000013089	ProperStrand	88	chr10	24899802	24899821	protein_coding	Akap7	intron	ENSMUSG00000039166	NonProperStrand	2	1	-inf
chr11	23396794	23396810	protein_coding	Ahsa2	exon	ENSMUSG00000020288	NonProperStrand	1	chr13	46862891	46862928	snoRNA	ENSMUSG00000064558_SNORA55	.	ENSMUSG00000064558	ProperStrand	187	1	-inf
chr2	69193622	69193669	LINE	L1Md_F2	L1	chr2L1Md_F269191897	ProperStrand	54	chr15	79913300	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	6	-18.9308
chr8	124407647	124408883	protein_coding	Slc7a5	exon	ENSMUSG00000040010	ProperStrand	166	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-3.9122
chr4	132754889	132754989	protein_coding	Wasf2	utr3	ENSMUSG00000028868	ProperStrand	56	chr15	34370545	34370622	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-3.6769
chr5	145857055	145857121	protein_coding	Arpc1a	exon	ENSMUSG00000029621	ProperStrand	19	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7016
chr4	125950258	125950348	protein_coding-noncoding	Trappc3	utr5	ENSMUSG00000028847	ProperStrand	1	chr4	125949815	125949905	protein_coding	Trappc3	intron	ENSMUSG00000028847	ProperStrand	15	1	-inf
chr16	57134891	57136828	protein_coding	Tomm70a	exon	ENSMUSG00000022752	ProperStrand	82	chr3	18077534	18077624	snRNA	ENSMUSG00000064594_U1	.	ENSMUSG00000064594	ProperStrand	2	1	-20.6649
chr7	20282372	20282393	protein_coding	Apoe	exon	ENSMUSG00000002985	ProperStrand	231	chr6	114260511	114260527	protein_coding	Slc6a1	exon	ENSMUSG00000030310	NonProperStrand	147	1	-8.8149
chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-6.1591
chr7	87427383	87428336	protein_coding	Vps33b	exon	ENSMUSG00000030534	ProperStrand	13	chr7	127979010	127979052	tRNA	tRNA861-LeuTAG	.	980141	ProperStrand	49	1	-16.8924
chr10	89282305	89282322	protein_coding	Uhrf1bp1l	utr3	ENSMUSG00000019951	NonProperStrand	55	chr7	117189945	117190058	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.4918
chr4	125386479	125386538	protein_coding	Grik3	utr3	ENSMUSG00000001985	ProperStrand	126	chr7	118219575	118219649	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-2.8126
chr9	120039532	120039686	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	chr16	23111694	23111838	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	118	-1.5522
mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr2	155479245	155479261	protein_coding	Trpc4ap	exon	ENSMUSG00000038324	ProperStrand	38	1	-6.8084
chr3	96361905	96361953	protein_coding	Txnip	utr5	ENSMUSG00000038393	ProperStrand	172	chr11	69481332	69481371	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-1.4596
chr14	67691159	67691225	protein_coding	Ppp2r2a	utr5	ENSMUSG00000022052	ProperStrand	45	chr12	88912985	88913005	protein_coding	Gm2022	intron	ENSMUSG00000071217	NonProperStrand	57	1	-13.9956
chr12	88778692	88778767	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	chr4	122970399	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	4	-5.2959
chr14	55476645	55476661	protein_coding	Homez	exon	ENSMUSG00000057156	NonProperStrand	127	chr7	29136556	29136610	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.2139
chr1	92698923	92698940	protein_coding	Col6a3	exon	ENSMUSG00000048126	NonProperStrand	44	chr17	23963427	23963479	protein_coding	Tceb2	intron	ENSMUSG00000055839	ProperStrand	12	1	-17.3669
chr12	16946892	16946921	snoRNA	ENSMUSG00000064620_SNORA32	.	ENSMUSG00000064620	NonProperStrand	1	chr2	26494713	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	NonProperStrand	27	1	-inf
chr10	60895741	60895795	protein_coding	Eif4ebp2	utr3	ENSMUSG00000020091	ProperStrand	39	chr13	51743638	51743703	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-7.7199
chr12	57368398	57368417	DNA	MER5A	MER1_type	chr12MER5A57368332	NonProperStrand	5	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-12.0725
chr2	91496545	91496563	protein_coding	Arhgap1	intron	ENSMUSG00000027247	NonProperStrand	2	chr7	52661677	52661693	protein_coding	Kcna7	utr5	ENSMUSG00000038201	ProperStrand	10	1	-inf
chr5	121655016	121655106	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	NonProperStrand	38	chr18	35714165	35714255	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	NonProperStrand	47	1	-14.7481
chr10	76551648	76559130	protein_coding	Col18a1	exon	ENSMUSG00000001435	ProperStrand	287	chr4	131908236	131908339	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	5	-1.2180
chr16	91729699	91729723	protein_coding	Itsn1	utr5	ENSMUSG00000022957	ProperStrand	172	chr12	112779228	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	2	-4.9039
chr2	145076804	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	chr2	153050783	153050799	protein_coding	Tspyl3	exon	ENSMUSG00000074671	ProperStrand	228	1	-5.0971
chr4	128874206	128874368	protein_coding	Yars	exon	ENSMUSG00000028811	ProperStrand	131	chr16	23111698	23111749	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-0.8215
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chrX	152009278	152009294	protein_coding	Ptchd1	exon	ENSMUSG00000041552	NonProperStrand	294	1	-2.9065
chr9	70960077	70960093	protein_coding	Aqp9	exon	ENSMUSG00000032204	NonProperStrand	118	chr19	8800085	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	2	-10.1519
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	124066021	124066038	protein_coding	Gm20388	intron	ENSMUSG00000092329	NonProperStrand	203	1	-2.2619
chr5	30092066	30092089	protein_coding	Dnajb6	exon	ENSMUSG00000029131	ProperStrand	81	chr5	130300503	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.0102
chr6	82686593	82686647	protein_coding	Hk2	exon	ENSMUSG00000000628	ProperStrand	88	chr8	129468851	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-3.6930
chr6	83879628	83879760	protein_coding	Zfml	exon	ENSMUSG00000030016	ProperStrand	45	chr4	59766122	59766139	protein_coding	E130308A19Rik	utr3	ENSMUSG00000045071	ProperStrand	41	1	-14.6664
chr15	64100942	64100958	protein_coding	Asap1	intron	ENSMUSG00000022377	ProperStrand	29	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-10.0587
chr8	131244323	131246305	protein_coding	Itgb1	exon	ENSMUSG00000025809	ProperStrand	35	chrX	34622905	34622990	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-4.1730
chr13	74192397	74195797	protein_coding	Cep72	exon	ENSMUSG00000021572	ProperStrand	10	chr8	13876097	13876177	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-10.7933
chr11	45958079	45958115	protein_coding	Adam19	utr3	ENSMUSG00000011256	ProperStrand	134	chr8	73419657	73419764	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-1.7745
chr8	124080196	124082955	protein_coding	Gm20388	intron	ENSMUSG00000092329	ProperStrand	295	chr19	8963087	8963165	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	2	-11.2212
chr7	142887389	142887450	protein_coding	Mki67	exon	ENSMUSG00000031004	ProperStrand	286	chr1	162965545	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-0.8489
chr17	68106086	68110995	protein_coding	Lama1	exon	ENSMUSG00000032796	ProperStrand	168	chr1	88247740	88247799	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	6	-16.7870
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr4	121870889	122132506	pseudogene	Gm12896	.	ENSMUSG00000083558	NonProperStrand	19	1	-9.3450
chr12	17552949	17553030	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr7	16524114	16524204	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	1	-1.8614
chr8	109177805	109180747	protein_coding	Cdh1	exon	ENSMUSG00000000303	ProperStrand	283	chr11	62416575	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	5	-10.9228
chr17	35971938	35971955	protein_coding	Tubb5	exon	ENSMUSG00000001525	ProperStrand	624	chr4	57706987	57707003	protein_coding	Palm2	intron	ENSMUSG00000090053	NonProperStrand	187	1	-6.3698
chr14	121497018	121497052	protein_coding	Farp1	intron	ENSMUSG00000025555	ProperStrand	18	chr16	23110968	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7867
chr19	10561593	10561728	SINE	ID_B1	B4	chr19ID_B110561502	ProperStrand	2	chr16	23110940	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr12	12947092	12947192	protein_coding	Mycn	exon	ENSMUSG00000037169	ProperStrand	24	chr17	35299507	35299563	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-6.5813
chr11	102861027	102861054	protein_coding	Dcakd	exon	ENSMUSG00000020935	ProperStrand	61	chr11	120148960	120148976	protein_coding	Bahcc1	exon	ENSMUSG00000039741	NonProperStrand	268	1	-10.2798
chr5	121251066	121252059	protein_coding	Oas1c	exon	ENSMUSG00000001166	NonProperStrand	1	chr16	23111777	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-inf
chr1	127491934	127491955	protein_coding	Slc35f5	utr3	ENSMUSG00000026342	ProperStrand	70	chr7	29136525	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-3.7928
chr4	85016349	85016365	protein_coding	Sh3gl2	intron	ENSMUSG00000028488	NonProperStrand	313	chr11	77996560	77996604	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-2.9661
chr6	128384773	128384849	protein_coding	Fkbp4	exon	ENSMUSG00000030357	ProperStrand	114	chr11	97642996	97643086	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-4.2752
chr16	41831999	41832015	protein_coding	Lsamp	intron	ENSMUSG00000061080	NonProperStrand	19	chr1	162965531	162965592	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.4761
chr16	44225761	44225778	protein_coding	Gm608	utr3	ENSMUSG00000068284	NonProperStrand	29	chr9	120037898	120037993	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-6.1297
chr11	55300986	55308945	protein_coding	G3bp1	exon	ENSMUSG00000018583	ProperStrand	106	chr4	131908752	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-2.0783
chr8	119480947	119481037	protein_coding	Atmin	exon	ENSMUSG00000047388	ProperStrand	26	chr7	29136534	29136614	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.8707
chr4	131908822	131908895	lincRNA	Gm17300	exon	ENSMUSG00000091021	ProperStrand	109	chr12	114047317	114047333	protein_coding	BC022687	utr5	ENSMUSG00000037594	NonProperStrand	1	1	-inf
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	1	-4.3095
chr15	8443908	8443929	LINE	Lx5	L1	chr15Lx58443876	ProperStrand	1	chr3	113827103	113827119	protein_coding	Col11a1	utr3	ENSMUSG00000027966	NonProperStrand	139	1	-inf
chr10	33721517	33722250	protein_coding	Rwdd1	exon	ENSMUSG00000019782	ProperStrand	7	chr7	148634803	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-8.2990
chr9	120038466	120038672	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	chr1	88247742	88247876	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	32	-4.1902
chr17	35972552	35972632	protein_coding	Tubb5	exon	ENSMUSG00000001525	ProperStrand	624	chr15	76005287	76005377	protein_coding	Plec	exon	ENSMUSG00000022565	ProperStrand	186	1	-6.3803
chr13	44998370	44998460	protein_coding	Jarid2	exon	ENSMUSG00000038518	ProperStrand	372	chr12	106269286	106269376	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	NonProperStrand	38	1	-10.5789
chr6	92192831	92192921	protein_coding	Trh	exon	ENSMUSG00000005892	ProperStrand	87	chr16	32615412	32616846	protein_coding	Tfrc	exon	ENSMUSG00000022797	ProperStrand	71	1	-12.2285
chr6	24684480	24684497	protein_coding	Hyal6	exon	ENSMUSG00000029679	NonProperStrand	114	chr10	127521199	127521270	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	3	-16.8423
chr1	16092834	16094455	protein_coding	Rpl7	exon	ENSMUSG00000043716	ProperStrand	93	chr18	35716703	35716884	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	5	-8.1144
chr5	73699329	73699429	protein_coding	Ociad1	utr3	ENSMUSG00000029152	ProperStrand	51	chr1	162966824	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	17	-inf
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr18	35102297	35102342	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-2.8536
chr9	64025762	64025810	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	chr16	11222768	11222814	protein_coding	Gspt1	exon	ENSMUSG00000062203	ProperStrand	49	1	-9.0861
chrX	133429965	133429985	LTR	MTEa	MaLR	chrXMTEa133429655	ProperStrand	2	chr2	158185554	158185652	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	2	-inf
chr2	90235287	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	129468744	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	25	-5.5748
chr10	20245757	20245780	protein_coding	Pde7b	intron	ENSMUSG00000019990	NonProperStrand	17	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-6.7782
chr9	39358287	39358304	protein_coding	Olfr958	exon	ENSMUSG00000050853	NonProperStrand	266	chr17	35089181	35089238	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-2.7059
chr2	174106766	174106826	antisense	Nespas	.	ENSMUSG00000086537	ProperStrand	8	chr11	62416575	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-9.2486
chr2	118932514	118932575	SINE	B3	B2	chr2B3118932447	ProperStrand	2	chr2	118896393	118896493	protein_coding	Casc5	exon	ENSMUSG00000027326	ProperStrand	30	2	-inf
chr12	109350397	109350415	protein_coding	Setd3	exon	ENSMUSG00000056770	ProperStrand	21	chr10	23506278	23506315	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-9.0597
chr10	127947624	127947641	protein_coding	Esyt1	utr3	ENSMUSG00000025366	NonProperStrand	32	chr2	91613185	91613203	protein_coding	Ambra1	exon	ENSMUSG00000040506	ProperStrand	65	1	-14.4212
chr17	23954245	23954291	protein_coding	Srrm2	utr3	ENSMUSG00000039218	ProperStrand	521	chr11	62416952	62416992	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	2	-3.6980
chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	chr2	29842332	29842384	protein_coding	Spna2	exon	ENSMUSG00000057738	ProperStrand	222	1	-6.5848
chrX	45318701	45318749	protein_coding	Ocrl	utr3	ENSMUSG00000001173	ProperStrand	9	chr4	131908718	131908808	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-7.7011
chr6	51432752	51432829	protein_coding	Cbx3	utr3	ENSMUSG00000029836	ProperStrand	19	chr1	72871208	72871298	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	1	-11.8151
chr8	73419657	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	chr11	106362618	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	10	-2.8137
chr2	145076804	145209256	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	chr11	83107809	83107903	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	1	-3.4006
chr1	193925421	193925437	protein_coding	Rcor3	intron	ENSMUSG00000037395	ProperStrand	25	chr16	23110900	23110920	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.2939
chr9	120037900	120038054	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	chr5	108334195	108336492	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	12	-1.4504
chr3	89883653	89883752	protein_coding	Tpm3	exon	ENSMUSG00000027940	ProperStrand	55	chr7	106627803	106627861	protein_coding	Rps3	exon	ENSMUSG00000030744	ProperStrand	159	1	-11.5325
chr5	121654544	121654567	protein_coding	Rpl6	utr5	ENSMUSG00000029614	ProperStrand	332	chr9	121383246	121383292	protein_coding	Trak1	utr3	ENSMUSG00000032536	ProperStrand	152	4	-21.4335
chrX	106029724	106029814	Low_complexity	G-rich	Low_complexity	chrXG-rich106029660	NonProperStrand	1	chrX	106030015	106030105	lincRNA	2810403D21Rik	exon	ENSMUSG00000086629	NonProperStrand	4	1	-inf
chr9	106789110	106789133	protein_coding	Rbm15b	exon	ENSMUSG00000045365	ProperStrand	17	chr19	8963088	8963178	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-11.1406
chr2	11516977	11517036	protein_coding	Rbm17	exon	ENSMUSG00000037197	ProperStrand	50	chr2	26493392	26493482	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-4.0847
chr8	98269956	98270096	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	chr8	113366285	113366313	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	1	-1.8047
chr11	7067186	7069426	protein_coding	Adcy1	exon	ENSMUSG00000020431	ProperStrand	183	chr7	38468013	38468033	protein_coding	Zfp536	intron	ENSMUSG00000043456	ProperStrand	57	1	-11.1792
mmu-miR-2137	0	19	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	chr13	114397350	114397366	protein_coding	Snx18	intron	ENSMUSG00000042364	NonProperStrand	7	1	-15.9824
chr15	99070172	99070188	protein_coding	Kcnh3	exon	ENSMUSG00000037579	NonProperStrand	44	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-5.8073
chr7	29759695	29759740	protein_coding	Eif3k	intron	ENSMUSG00000053565	ProperStrand	31	chr16	23110982	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0062
chr19	5401375	5401475	SINE	B2_Mm1a	B2	chr19B2_Mm1a5401321	ProperStrand	1	chr16	23110955	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr14	57021594	57024416	protein_coding	Rnf17	exon	ENSMUSG00000000365	ProperStrand	16	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-11.6621
chr4	147992744	147992773	protein_coding	Tardbp	exon	ENSMUSG00000041459	ProperStrand	120	chr8	98269993	98270083	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-4.2074
chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr9	35229665	35229682	protein_coding	Cdon	intron	ENSMUSG00000038119	ProperStrand	33	1	-7.6466
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr2	32818785	32818875	protein_coding-noncoding	Rpl12	utr5	ENSMUSG00000038900	ProperStrand	68	11	-19.4459
chr4	43505870	43505931	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr19	53032087	53032105	protein_coding	Xpnpep1	intron	ENSMUSG00000025027	ProperStrand	49	1	-3.4383
chr2	90235292	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	172612010	172612026	protein_coding	Olfml2b	exon	ENSMUSG00000038463	ProperStrand	57	1	-4.5608
chr8	97003436	97003591	lincRNA	Nlrc5	exon	ENSMUSG00000074151	NonProperStrand	25	chr5	130300419	130300472	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.1053
chr10	80850973	80851036	protein_coding	Dohh	utr3	ENSMUSG00000078440	ProperStrand	26	chr2	26494722	26494807	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	11	-19.6483
chr4	8089689	8089706	protein_coding	Car8	intron	ENSMUSG00000041261	ProperStrand	6	chr9	15119660	15119760	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-7.1405
chr12	111891523	111891623	protein_coding	Dync1h1	intron	ENSMUSG00000018707	ProperStrand	648	chr5	121655035	121655098	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-0.7564
chr2	4974190	4974207	protein_coding	Optn	exon	ENSMUSG00000026672	ProperStrand	451	chr17	13115655	13115766	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	1	-3.6277
chr9	78023109	78023183	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr19	10701649	10701666	protein_coding	Ddb1	exon	ENSMUSG00000024740	ProperStrand	304	2	-4.8995
chr1	189049912	189050023	protein_coding	Gpatch2	exon	ENSMUSG00000039210	ProperStrand	11	chr11	106362341	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-9.2711
chr8	124353372	124353390	protein_coding	Klhdc4	utr5	ENSMUSG00000040263	ProperStrand	13	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-14.8149
chr2	160583017	160583785	protein_coding	Plcg1	exon	ENSMUSG00000016933	ProperStrand	65	chr19	6058460	6058550	protein_coding	Fau	exon	ENSMUSG00000038274	ProperStrand	64	1	-13.0223
chr15	99074558	99074575	protein_coding	Mcrs1	intron	ENSMUSG00000037570	ProperStrand	46	chr4	131865855	131865986	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.1947
chr9	65544788	65544808	protein_coding	Zfp609	intron	ENSMUSG00000040524	NonProperStrand	3	chr1	9932607	9932626	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-14.0920
chr4	131866173	131866273	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	NonProperStrand	19	chr4	131865380	131865428	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	NonProperStrand	15	1	-19.0680
chr17	32453268	32453285	protein_coding	Akap8	exon	ENSMUSG00000024045	ProperStrand	339	chr1	177539824	177539927	protein_coding	Fh1	exon	ENSMUSG00000026526	ProperStrand	37	5	-inf
chr2	90235298	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	31856733	31856750	LINE	Lx7	L1	chr4Lx731856435	NonProperStrand	14	2	-11.8833
chr11	63993698	63993715	lincRNA	Gm12290	intron	ENSMUSG00000087622	ProperStrand	2	chr8	32260360	32260427	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-12.0137
chr8	104510035	104510055	LINE	L1_Rod	L1	chr8L1_Rod104509928	NonProperStrand	26	chr4	131908709	131908799	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.5345
chr10	127669076	127669166	lincRNA	Gm17292	exon	ENSMUSG00000091500	NonProperStrand	1	chr10	127669572	127669662	protein_coding	Timeless	intron	ENSMUSG00000039994	ProperStrand	53	1	-inf
chr11	80080114	80080131	protein_coding	Rhot1	utr3	ENSMUSG00000017686	NonProperStrand	48	chr6	4704544	4704594	protein_coding	Peg10	exon	ENSMUSG00000092035	ProperStrand	102	2	-18.6226
chr2	37207267	37207357	protein_coding	Pdcl	utr3	ENSMUSG00000009030	ProperStrand	32	chr9	120038563	120038643	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.2048
chr4	147385125	147385141	protein_coding	Clcn6	exon	ENSMUSG00000029016	ProperStrand	120	chr10	80640955	80641443	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-4.7499
chr2	32818774	32818874	protein_coding-noncoding	Rpl12	utr5	ENSMUSG00000038900	ProperStrand	68	chr2	26768404	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	2	-8.7853
chr3	152057362	152057452	SINE	B1_Mus1	Alu	chr3B1_Mus1152057369	NonProperStrand	1	chr5	134817620	134817710	SINE	B1_Mus1	Alu	chr5B1_Mus1134817626	NonProperStrand	1	1	-inf
chr5	29317813	29317829	LINE	Lx7	L1	chr5Lx729317715	ProperStrand	19	chr2	73151161	73151225	protein_coding	Scrn3	intron	ENSMUSG00000008226	ProperStrand	9	1	-19.6683
chr13	63612936	63612952	protein_coding	Ptch1	exon	ENSMUSG00000021466	NonProperStrand	118	chr4	21606097	21606114	protein_coding	Prdm13	exon	ENSMUSG00000040478	ProperStrand	51	1	-12.2831
chr9	63868722	63868738	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	chr9	15119968	15120018	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-2.7545
chr10	6063959	6063978	protein_coding	Akap12	intron	ENSMUSG00000038587	ProperStrand	1008	chr4	135607169	135607580	protein_coding	Rpl11	exon	ENSMUSG00000059291	ProperStrand	152	1	-5.8379
chr7	110114018	110114034	protein_coding	Olfr576	exon	ENSMUSG00000073962	NonProperStrand	79	chr11	62416582	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-4.6354
chr11	77973124	77973214	protein_coding	Traf4	utr3	ENSMUSG00000017386	ProperStrand	34	chr5	130300459	130300539	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.5258
chr11	90198421	90198437	protein_coding	Hlf	utr3	ENSMUSG00000003949	NonProperStrand	25	chr12	17552949	17553072	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-6.8192
chr13	59932957	59932973	LINE	L1_Mur3	L1	chr13L1_Mur359932072	ProperStrand	32	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-8.4630
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr5	30925527	30925543	protein_coding	Kcnk3	utr3	ENSMUSG00000049265	NonProperStrand	21	1	-12.5561
chr15	12100610	12101555	protein_coding	Zfr	exon	ENSMUSG00000022201	ProperStrand	48	chr7	52382754	52382800	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	2	-11.5682
chr19	45099220	45099320	protein_coding	Lzts2	exon	ENSMUSG00000035342	ProperStrand	14	chr4	131908236	131908299	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.9265
chr1	138382212	138382230	protein_coding	Kif14	intron	ENSMUSG00000041498	NonProperStrand	36	chr5	130295496	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	2	-10.1588
chr1	72290896	72290976	snRNA	ENSMUSG00000093111_AC120136.1	.	ENSMUSG00000093111	ProperStrand	137	chr8	73419683	73419773	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-1.7404
chr1	121368056	121368072	protein_coding	Ralb	utr3	ENSMUSG00000004451	ProperStrand	17	chr9	41785884	41785903	protein_coding	Sorl1	intron	ENSMUSG00000049313	ProperStrand	112	1	-14.6302
chr6	144988026	144988117	protein_coding	Bcat1	exon	ENSMUSG00000030268	ProperStrand	49	chr2	145077956	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-8.1286
mmu-miR-6240	3	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr1	191675112	191675181	protein_coding	Ptpn14	exon	ENSMUSG00000026604	ProperStrand	74	1	-5.4927
chr3	113827103	113827119	protein_coding	Col11a1	utr3	ENSMUSG00000027966	NonProperStrand	139	chr3	85942725	85942780	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	1	-8.0381
chr1	102076753	102076784	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	chr9	64143804	64143875	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	3	-9.6994
chr12	113040246	113040293	protein_coding	Klc1	intron	ENSMUSG00000021288	ProperStrand	35	chr2	121126444	121126462	protein_coding	Mtap1a	exon	ENSMUSG00000027254	NonProperStrand	21	1	-16.5143
chr3	88603786	88603866	pseudogene	5830417I10Rik	.	ENSMUSG00000078684	ProperStrand	68	chr16	23111451	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-2.1407
chr6	149283954	149283971	protein_coding	2810474O19Rik	utr3	ENSMUSG00000032712	ProperStrand	70	chr7	150717315	150717405	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	4	-16.0904
chr12	70413651	70415416	protein_coding	Nemf	exon	ENSMUSG00000020982	ProperStrand	77	chr2	167515447	167515555	protein_coding	Cebpb	utr3	ENSMUSG00000056501	ProperStrand	6	1	-17.5452
chr10	80949999	80950084	protein_coding	Ncln	utr3	ENSMUSG00000020238	ProperStrand	18	chr16	23111739	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.0433
chr17	64213892	64213908	protein_coding	Fer	intron	ENSMUSG00000000127	NonProperStrand	5	chr13	18919507	18919527	protein_coding	Vps41	exon	ENSMUSG00000041236	ProperStrand	31	1	-18.4153
chr11	116704531	116704549	protein_coding	Jmjd6	utr5	ENSMUSG00000056962	ProperStrand	92	chr1	162967489	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-2.7084
chr11	30013893	30013993	protein_coding	Spnb2	exon	ENSMUSG00000020315	ProperStrand	103	chr2	166890560	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-6.4853
chr5	86614439	86614455	protein_coding	Gnrhr	exon	ENSMUSG00000029255	NonProperStrand	13	chr4	131865429	131865504	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	2	-11.3941
chr10	79376432	79379610	protein_coding	C030046I01Rik	exon	ENSMUSG00000035781	ProperStrand	14	chr2	158182156	158182200	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-7.9086
chr5	149860468	149861366	protein_coding	Hmgb1	exon	ENSMUSG00000066551	ProperStrand	99	chr6	71832550	71832618	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-4.6409
chr9	70960076	70960093	protein_coding	Aqp9	exon	ENSMUSG00000032204	NonProperStrand	118	chr17	13115655	13115785	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	3	-14.1780
chr16	58463205	58464386	protein_coding	Dcbld2	exon	ENSMUSG00000035107	ProperStrand	56	chr2	26493366	26493415	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-3.8714
chr11	116460473	116460490	protein_coding	Rhbdf2	exon	ENSMUSG00000020806	NonProperStrand	2	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-15.2057
chr8	127426897	127426951	protein_coding	Gm505	exon	ENSMUSG00000031986	ProperStrand	8	chr11	6428035	6428086	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-11.6954
chr5	111216832	111216922	protein_coding	Ulk1	exon	ENSMUSG00000029512	ProperStrand	92	chr5	140817609	140817665	protein_coding	Snx8	intron	ENSMUSG00000029560	ProperStrand	106	1	-11.3111
chr7	130363535	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	chr1	137271110	137271126	protein_coding	Shisa4	exon	ENSMUSG00000041889	ProperStrand	64	1	-12.4361
chr5	36957802	36957828	protein_coding	D5Ertd579e	exon	ENSMUSG00000029190	ProperStrand	43	chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	1	-9.2624
chr6	115768965	115768983	antisense	BC060267	.	ENSMUSG00000030321	ProperStrand	3	chr1	72238657	72238717	protein_coding	Mreg	exon	ENSMUSG00000039395	ProperStrand	63	2	-inf
chr8	121970655	121970671	protein_coding	Necab2	utr5	ENSMUSG00000031837	NonProperStrand	26	chr7	29136554	29136571	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.8707
chr2	24205199	24205215	protein_coding	Il1rn	utr3	ENSMUSG00000026981	ProperStrand	45	chr7	52382237	52382314	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-8.8607
chr4	137097327	137097363	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	chr16	57513466	57513482	protein_coding	Filip1l	exon	ENSMUSG00000043336	ProperStrand	269	1	-5.1483
chr8	24343122	24343144	protein_coding	Gins4	exon	ENSMUSG00000031546	ProperStrand	10	chr9	120037956	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	5	-20.4808
chr5	115940324	115940406	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	chr12	106269354	106269479	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	25	-inf
chr5	54389949	54389965	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	chr10	79075790	79075807	protein_coding	C2cd4c	exon	ENSMUSG00000045912	NonProperStrand	2	1	-18.3100
chr7	86980898	86981125	protein_coding	Anpep	exon	ENSMUSG00000039062	ProperStrand	9	chr12	92811868	92811893	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	2	-18.7591
chr12	88667436	88667549	protein_coding	Sptlc2	intron	ENSMUSG00000021036	ProperStrand	43	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-7.5801
chr11	98784592	98784608	protein_coding	Cdc6	utr3	ENSMUSG00000017499	NonProperStrand	2	chr15	34370545	34370662	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-10.8601
chr1	72166839	72166855	SINE	B4A	B4	chr1B4A72166632	ProperStrand	19	chr2	92024342	92024363	protein_coding	Phf21a	utr5	ENSMUSG00000058318	ProperStrand	25	1	-17.2676
chr2	90235294	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr14	24251850	24251866	protein_coding	Kcnma1	intron	ENSMUSG00000063142	NonProperStrand	104	1	-3.4329
chr10	67561191	67581036	protein_coding	Arid5b	exon	ENSMUSG00000019947	ProperStrand	43	chr16	23111451	23111505	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	6	-11.5646
chr2	180424079	180424156	protein_coding	Dido1	exon	ENSMUSG00000038914	ProperStrand	81	chr2	130101257	130101308	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-5.9990
chrX	99380872	99380958	protein_coding	Rps4x	exon	ENSMUSG00000031320	ProperStrand	139	chr7	19886602	19886628	tRNA	tRNA86-SeCTCA	.	282580	ProperStrand	34	2	-18.3446
chr1	66221974	66221990	protein_coding	Mtap2	utr5	ENSMUSG00000015222	NonProperStrand	18	chr16	23110465	23110495	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.6884
chr9	24252267	24255158	protein_coding	Dpy19l1	exon	ENSMUSG00000043067	ProperStrand	24	chr4	131908689	131908749	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	8	-20.0523
chr3	142773986	142774004	LTR	RMER15	ERVL	chr3RMER15142773869	NonProperStrand	4	chr19	8963087	8963181	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-7.6308
chr1	182828046	182828122	protein_coding	Lefty2	utr3	ENSMUSG00000066652	ProperStrand	48	chr2	26494706	26494796	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.5138
chr7	31910181	31911704	protein_coding	Scn1b	exon	ENSMUSG00000019194	ProperStrand	3	chr3	123210883	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-8.0648
chr15	5068453	5068480	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	chr13	96100565	96100692	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	1	-1.3761
chr2	127054858	127055278	protein_coding	Snrnp200	exon	ENSMUSG00000003660	ProperStrand	203	chr16	23110464	23110520	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-0.7136
chr17	4082723	4082743	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr1	88252843	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-3.4335
chr1	155754611	155755089	protein_coding	Glul	exon	ENSMUSG00000026473	ProperStrand	54	chr4	131865948	131865972	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-7.4884
chr4	43505757	43505847	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr1	55135115	55135172	protein_coding	Hspd1	utr3	ENSMUSG00000025980	ProperStrand	140	1	-1.6564
chr7	13631173	13636847	protein_coding	Mzf1	intron	ENSMUSG00000030380	NonProperStrand	14	chr2	26768368	26768433	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-8.5241
chr6	120432385	120432401	protein_coding	Il17ra	exon	ENSMUSG00000002897	ProperStrand	61	chr4	21606097	21606114	protein_coding	Prdm13	exon	ENSMUSG00000040478	ProperStrand	51	1	-13.6087
chrX	5684085	5684129	rRNA	n-R5s2	.	ENSMUSG00000075918	ProperStrand	25	chr1	162966189	162966255	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	3	-22.1618
chr13	97829240	97829330	LTR	MTA_Mm	MaLR	chr13MTA_Mm97829126	ProperStrand	1	chr1	13613181	13613271	SINE	PB1D10	Alu	chr1PB1D1013613187	NonProperStrand	1	1	-inf
chr11	97043066	97043138	protein_coding	Kpnb1	exon	ENSMUSG00000001440	ProperStrand	197	chr2	26493369	26493449	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-3.1260
chr4	14813784	14819567	protein_coding	Tmem55a	exon	ENSMUSG00000028221	ProperStrand	28	chr7	125944819	125944841	protein_coding	9030624J02Rik	exon	ENSMUSG00000030982	ProperStrand	18	2	-19.0500
chr3	104457212	104457274	protein_coding	Slc16a1	exon	ENSMUSG00000032902	ProperStrand	48	chr13	21292132	21292159	tRNA	tRNA65-LeuCAA	.	236732	ProperStrand	57	3	-19.1470
chr7	133911288	133911305	protein_coding	Gdpd3	exon	ENSMUSG00000030703	ProperStrand	3	chr14	27399308	27411722	protein_coding	Fam116a	exon	ENSMUSG00000040818	ProperStrand	23	1	-20.2630
chr9	123760679	123760696	protein_coding	Fyco1	utr5	ENSMUSG00000025241	ProperStrand	31	chr11	6428051	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-10.6929
chr14	32540824	32540940	protein_coding	Ankrd28	exon	ENSMUSG00000014496	ProperStrand	39	chr13	18915727	18915744	protein_coding	Vps41	exon	ENSMUSG00000041236	ProperStrand	31	1	-15.4766
chr16	17611496	17611586	Simple_repeat	(TTTC)n	Simple_repeat	chr16(TTTC)n17611508	ProperStrand	2	chr1	74593095	74593185	protein_coding	Plcd4	intron	ENSMUSG00000026173	NonProperStrand	2	2	-inf
chr7	52714456	52714546	protein_coding	Ftl1	exon	ENSMUSG00000050708	ProperStrand	807	chr1	88247742	88247822	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-0.7737
chr2	32781399	32781417	protein_coding	Lrsam1	utr3	ENSMUSG00000026792	ProperStrand	80	chr3	123210852	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	10	-20.7334
chr17	25028717	25028784	protein_coding	Spsb3	utr3	ENSMUSG00000024160	ProperStrand	10	chr17	13112454	13112544	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	6	-inf
chr11	8351470	8353133	protein_coding	Tns3	exon	ENSMUSG00000020422	ProperStrand	81	chr9	120038029	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-4.1339
chr7	36080554	36082552	protein_coding	Gpatch1	exon	ENSMUSG00000063808	ProperStrand	6	chr11	68887042	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	2	-14.2538
chr12	111748070	111748154	protein_coding	Ppp2r5c	intron	ENSMUSG00000017843	ProperStrand	36	chr14	76247807	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-5.1554
chr16	96273370	96273391	protein_coding	Brwd1	intron	ENSMUSG00000022914	NonProperStrand	13	chr11	55296280	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-9.2675
chr14	19102845	19102950	protein_coding	Rpl15	exon	ENSMUSG00000012405	ProperStrand	145	chr3	123210853	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-1.6720
chr15	74502390	74502467	protein_coding	Arc	exon	ENSMUSG00000022602	ProperStrand	16	chr18	73693112	73693139	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	4	-inf
chr5	137403323	137403344	lincRNA	4933404O12Rik	intron	ENSMUSG00000085062	NonProperStrand	11	chr16	23111383	23111415	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.1830
chr12	106855826	106855926	protein_coding	Atg2b	intron	ENSMUSG00000041341	ProperStrand	67	chr15	79913287	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-5.7879
chr17	27768189	27769239	protein_coding	Rps10	exon	ENSMUSG00000052146	ProperStrand	94	chr1	192712615	192712631	protein_coding	Rps6kc1	exon	ENSMUSG00000089872	ProperStrand	241	1	-9.6242
chr17	47080364	47081486	protein_coding	Ubr2	exon	ENSMUSG00000023977	ProperStrand	172	chrX	71517823	71517913	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-4.4961
chr11	106516300	106516390	protein_coding	Pecam1	utr3	ENSMUSG00000020717	ProperStrand	56	chr1	89673642	89673722	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-3.3892
chr5	74489206	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr11	70468112	70468132	protein_coding	Pfn1	utr5	ENSMUSG00000018293	ProperStrand	55	3	-13.4090
chr8	25815947	25815964	protein_coding	Adam3	intron	ENSMUSG00000031553	NonProperStrand	2	chr2	91447608	91447635	protein_coding	Ckap5	exon	ENSMUSG00000040549	ProperStrand	53	1	-inf
chr8	129601144	129601234	protein_coding	Pard3	intron	ENSMUSG00000025812	ProperStrand	44	chr11	69481351	69481431	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.7716
chr19	36953756	36953830	protein_coding	Tnks2	exon	ENSMUSG00000024811	ProperStrand	133	chrX	34622906	34622944	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-3.3265
chr11	6428059	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr7	51505242	51505308	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	4	-0.8765
chr5	106325542	106325559	protein_coding	Zfp326	exon	ENSMUSG00000029290	ProperStrand	29	chr2	130102034	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-6.7943
chr1	45448521	45448537	protein_coding	Col5a2	exon	ENSMUSG00000026042	ProperStrand	184	chr17	24857795	24857853	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-0.7138
chr6	93765818	93862891	protein_coding	Magi1	intron	ENSMUSG00000045095	NonProperStrand	47	chr7	52382616	52382890	protein_coding	Rpl13a	exon	ENSMUSG00000074129	ProperStrand	269	1	-10.7977
chr15	99074558	99074575	protein_coding	Mcrs1	intron	ENSMUSG00000037570	ProperStrand	46	chr4	116826700	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	2	-11.7425
chr8	11529653	11530334	protein_coding	Cars2	exon	ENSMUSG00000056228	ProperStrand	17	chr1	162967489	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-5.9112
chr5	65781660	65781679	protein_coding	Rpl9	exon	ENSMUSG00000047215	ProperStrand	113	chr9	120038461	120038525	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	3	-5.4164
chr5	24858058	24859164	protein_coding	Mll3	utr5	ENSMUSG00000038056	ProperStrand	31	chr2	158185530	158185580	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-7.8044
chr4	63133839	63133864	protein_coding	Whrn	exon	ENSMUSG00000039137	ProperStrand	20	chr5	122580412	122584741	protein_coding	Ccdc63	utr5	ENSMUSG00000043036	ProperStrand	120	1	-14.1536
chr1	94600714	94600731	LINE	L1MB8	L1	chr1L1MB894600394	ProperStrand	25	chr5	54389948	54389965	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	1	-12.5538
chr4	55431653	55431669	lincRNA	Gm12505	exon	ENSMUSG00000087070	ProperStrand	447	chr15	9042424	9042524	protein_coding	Skp2	utr3	ENSMUSG00000054115	ProperStrand	14	1	-12.2535
chr1	64782280	64782350	protein_coding	Fzd5	exon	ENSMUSG00000045005	ProperStrand	175	chr19	59037361	59037377	protein_coding	Eno4	exon	ENSMUSG00000048029	NonProperStrand	14	1	-14.1313
chr9	112088269	112088423	protein_coding-noncoding	Arpp21	utr3	ENSMUSG00000032503	ProperStrand	28	chr16	23111691	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.2134
chr15	76533100	76533140	protein_coding	Mfsd3	exon	ENSMUSG00000019080	ProperStrand	4	chr19	8800356	8800446	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-9.0532
chr6	129217869	129217885	protein_coding	Cd69	utr3	ENSMUSG00000030156	ProperStrand	2	chr1	162965980	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-10.9191
chr3	156224612	156224628	lincRNA	4930570G19Rik	exon	ENSMUSG00000085084	ProperStrand	326	chr8	12757416	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	2	-8.6099
chr3	86709994	86710039	protein_coding	Dclk2	exon	ENSMUSG00000028078	ProperStrand	50	chr18	35716831	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-9.0029
chr4	131908357	131909543	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr10	80639433	80644034	protein_coding	Eef2	utr5	ENSMUSG00000034994	ProperStrand	2244	5	-5.6432
chr10	110918632	110918722	protein_coding	Nap1l1	intron	ENSMUSG00000058799	ProperStrand	185	chr1	24620881	24620961	protein_coding	Gm10925	utr3	ENSMUSG00000090378	ProperStrand	320	1	-7.7091
chr8	114522825	114522862	protein_coding	Kars	exon	ENSMUSG00000031948	ProperStrand	89	chr18	33954874	33954943	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-2.7959
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr5	144476201	144476283	protein_coding	Usp42	exon	ENSMUSG00000051306	ProperStrand	17	4	-19.6134
chr8	13465797	13465887	protein_coding	Gas6	exon	ENSMUSG00000031451	ProperStrand	27	chr18	35714196	35714276	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.9601
chr7	133938773	133938873	protein_coding	Aldoa	utr3	ENSMUSG00000030695	ProperStrand	721	chr4	122970468	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-2.6815
chr9	21725525	21725566	protein_coding	Tmem205	exon	ENSMUSG00000040883	ProperStrand	8	chr8	73419657	73419729	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-7.0879
chr4	133261476	133261492	protein_coding	Arid1a	intron	ENSMUSG00000007880	NonProperStrand	7	chr16	23111417	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-5.0992
chr19	9051833	9051891	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	chr6	115758029	115758119	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-1.9730
chrX	93353238	93355459	protein_coding	Msn	exon	ENSMUSG00000031207	ProperStrand	71	chr9	15119641	15119731	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	4	-8.5933
chr14	8720083	8748529	protein_coding	Flnb	exon	ENSMUSG00000025278	ProperStrand	124	chr17	24857722	24857795	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-2.3003
chr17	21385360	21385377	LINE	L1Md_F2	L1	chr17L1Md_F221382260	NonProperStrand	1	chr11	48616641	48616699	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	1	-inf
chr1	134916292	134916333	protein_coding	Mdm4	intron	ENSMUSG00000054387	NonProperStrand	3	chr4	131908236	131908296	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-7.2242
chr11	97490434	97490513	protein_coding	E130012A19Rik	exon	ENSMUSG00000043439	ProperStrand	83	chr4	131908704	131908794	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.8165
chr19	29672584	29672611	protein_coding	C030046E11Rik	exon	ENSMUSG00000038658	ProperStrand	104	chr10	110918579	110918628	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-2.4732
chr2	25105896	25107254	protein_coding	Ndor1	exon	ENSMUSG00000006471	NonProperStrand	84	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-7.0698
chr12	73317935	73318408	protein_coding	Rtn1	exon	ENSMUSG00000021087	NonProperStrand	10	chr7	150717298	150717350	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-9.1270
chr7	63475254	63475938	protein_coding	Herc2	exon	ENSMUSG00000030451	ProperStrand	66	chr8	13416892	13416912	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	2	-10.1587
chr4	46482797	46484277	protein_coding	Anp32b	exon	ENSMUSG00000028333	ProperStrand	229	chr7	117189877	117189957	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-1.1640
chr17	56559116	56560709	protein_coding	Ptprs	exon	ENSMUSG00000013236	ProperStrand	152	chr1	162965980	162966032	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-1.9854
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	14996629	14996712	protein_coding	Arl5b	exon	ENSMUSG00000017418	ProperStrand	55	1	-4.6294
chr10	79282317	79282407	protein_coding	Palm	utr3	ENSMUSG00000035863	ProperStrand	58	chr5	139836179	139836259	protein_coding	3110082I17Rik	utr3	ENSMUSG00000053553	ProperStrand	4	1	-19.0839
chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	chr4	122970402	122970471	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-4.7812
chr5	65406611	65406629	protein_coding	Fam114a1	exon	ENSMUSG00000029185	ProperStrand	7	chr8	73419657	73419682	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-7.3719
chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	chrX	130496426	130496668	protein_coding	Sytl4	exon	ENSMUSG00000031255	ProperStrand	169	1	-10.4887
chr15	96063288	96063304	lincRNA	4833422M21Rik	exon	ENSMUSG00000085460	NonProperStrand	37	chr4	131908300	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.1700
chrX	49109011	49109043	protein_coding	Usp26	exon	ENSMUSG00000055780	ProperStrand	10	chr10	110918555	110918645	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	3	-16.2028
chr10	75956211	75956251	protein_coding	Mcm3ap	exon	ENSMUSG00000001150	ProperStrand	95	chr8	129468746	129468827	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-3.5517
chr13	9833552	9833685	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr1	44056679	44058178	protein_coding	Tpp2	exon	ENSMUSG00000041763	NonProperStrand	5	1	-10.0546
chr15	77798625	77798950	protein_coding	Eif3d	exon	ENSMUSG00000016554	ProperStrand	69	chr11	97642958	97643038	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.2363
chr4	43505756	43505846	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr9	24549618	24549663	protein_coding	Tbx20	intron	ENSMUSG00000031965	NonProperStrand	110	5	-10.0162
chr15	101920318	101920393	protein_coding	Eif4b	exon	ENSMUSG00000058655	ProperStrand	484	chr1	88247781	88247871	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-1.4276
chr13	58495067	58496996	protein_coding	Hnrnpk	exon	ENSMUSG00000021546	ProperStrand	117	chr19	8799845	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	3	-9.0605
chr16	37777391	37777408	protein_coding	Fstl1	exon	ENSMUSG00000022816	ProperStrand	179	chr6	131330344	131330410	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	ProperStrand	408	1	-7.2933
chr2	173097547	173097609	protein_coding	Pmepa1	intron	ENSMUSG00000038400	ProperStrand	25	chr10	110918549	110918639	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-5.1172
chr2	165177944	165177960	protein_coding	Zfp663	exon	ENSMUSG00000056824	ProperStrand	12	chr17	39985586	39985686	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-9.1812
chr1	185860850	185860868	protein_coding	Dusp10	exon	ENSMUSG00000039384	NonProperStrand	3	chr4	131865855	131865894	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.6896
chr7	117189863	117189930	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr19	4749128	4749426	protein_coding	Spnb3	exon	ENSMUSG00000067889	ProperStrand	19	4	-20.6486
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr7	38468013	38468033	protein_coding	Zfp536	intron	ENSMUSG00000043456	ProperStrand	57	1	-8.9425
chr5	93601439	93601456	protein_coding	Sept11	utr3	ENSMUSG00000058013	NonProperStrand	4	chr16	23111770	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-12.0512
chr11	121008670	121008770	protein_coding	Tex19.1	exon	ENSMUSG00000039329	ProperStrand	12	chr4	116827121	116827191	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-10.3066
chr9	59555749	59555765	protein_coding	Gramd2	utr5	ENSMUSG00000074259	ProperStrand	12	chr16	23111406	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-13.6410
chr4	86501849	86502080	protein_coding	Rps6	exon	ENSMUSG00000028495	ProperStrand	263	chr9	15118327	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-1.0796
chr15	96843416	96843939	protein_coding	Slc38a4	exon	ENSMUSG00000022464	ProperStrand	139	chr17	73552968	73552998	protein_coding	Lclat1	intron	ENSMUSG00000054469	ProperStrand	10	1	-15.2749
chr12	107643939	107643959	LTR	MTD	MaLR	chr12MTD107643845	ProperStrand	1	chr4	122968617	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-inf
chr5	135096880	135101311	protein_coding	Eif4h	exon	ENSMUSG00000040731	ProperStrand	46	chr5	130300445	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	5	-13.2870
chr7	29171540	29171558	protein_coding	Med29	utr3	ENSMUSG00000003444	NonProperStrand	134	chr7	134671386	134671463	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-6.2785
chr7	134671401	134671519	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	chr4	131908232	131908455	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	20	-2.8874
chr1	17520079	17520100	LINE	L1_Mus2	L1	chr1L1_Mus217519924	ProperStrand	1	chr7	28146782	28146798	protein_coding	Spnb4	exon	ENSMUSG00000011751	NonProperStrand	84	1	-inf
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr5	108334234	108334324	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-1.0898
chr11	101306534	101306634	protein_coding	Rpl27	exon	ENSMUSG00000063316	ProperStrand	96	chr9	15118323	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	11	-21.3477
chr10	95458207	95458266	protein_coding	Eea1	exon	ENSMUSG00000036499	ProperStrand	82	chr3	19126397	19126415	protein_coding	Pde7a	utr3	ENSMUSG00000069094	ProperStrand	12	1	-16.0018
chr7	140909451	140910849	protein_coding	Bccip	exon	ENSMUSG00000030983	ProperStrand	19	chr16	23110553	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.5826
chr14	31827478	31827545	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	chr17	35088971	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	2	-1.2242
chr11	116034672	116034706	protein_coding	Acox1	utr3	ENSMUSG00000020777	ProperStrand	4	chr11	69483172	69483237	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-7.8378
chr6	114811233	114811323	protein_coding-noncoding	Vgll4	utr3	ENSMUSG00000030315	ProperStrand	1	chr6	114811568	114811658	protein_coding	Vgll4	utr3	ENSMUSG00000030315	ProperStrand	12	1	-inf
chr4	139482849	139482865	lincRNA	4933427I22Rik	exon	ENSMUSG00000085928	ProperStrand	62	chr1	162966813	162966872	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-6.1942
chr12	66091224	66091268	protein_coding	Fam179b	intron	ENSMUSG00000035614	ProperStrand	21	chr15	73367842	73367892	protein_coding	Dennd3	intron	ENSMUSG00000036661	ProperStrand	11	3	-20.1180
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr10	80641695	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	3	-6.1899
chr13	7040303	7040393	LINE	L1_Mus1	L1	chr13L1_Mus17040077	NonProperStrand	1	chr1	17026669	17026749	protein_coding	Jph1	intron	ENSMUSG00000042686	ProperStrand	39	1	-inf
chr14	63761298	63761432	protein_coding	Ctsb	utr3	ENSMUSG00000021939	ProperStrand	48	chr15	71624775	71624799	snoRNA	ENSMUSG00000088895_SNORA81	.	ENSMUSG00000088895	ProperStrand	348	1	-10.2405
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr11	96599169	96599185	lincRNA	2010300F17Rik	intron	ENSMUSG00000091444	ProperStrand	2	1	-16.1911
chr9	56884530	56892191	protein_coding	Ptpn9	exon	ENSMUSG00000032290	ProperStrand	10	chr1	93263060	93263079	protein_coding	Fam132b	exon	ENSMUSG00000047443	NonProperStrand	98	1	-16.0023
chr7	4960124	4964585	protein_coding	Fiz1	exon	ENSMUSG00000061374	ProperStrand	37	chr2	26494708	26494800	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	3	-9.7936
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr1	88247758	88247848	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	2	-0.8243
chr10	114779275	114779312	protein_coding	Tmem19	utr3	ENSMUSG00000069520	ProperStrand	24	chr18	35716727	35716761	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-9.4498
chr18	60979065	60979111	protein_coding	Tcof1	utr3	ENSMUSG00000024613	ProperStrand	68	chr9	15119736	15119767	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.4150
chr2	90235317	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	22974441	22974458	protein_coding	Trpm3	intron	ENSMUSG00000052387	NonProperStrand	16	1	-7.0757
chr12	33638595	33638614	lincRNA	4933406C10Rik	exon	ENSMUSG00000086543	ProperStrand	52	chr15	79908952	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	2	-9.3905
chr14	51463983	51463999	protein_coding	Tep1	exon	ENSMUSG00000006281	NonProperStrand	73	chr14	76247712	76247791	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-3.8035
chr6	114260511	114260527	protein_coding	Slc6a1	exon	ENSMUSG00000030310	NonProperStrand	147	chr11	69483136	69483196	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.0872
chr8	74670351	74670409	protein_coding	Tpm4	exon	ENSMUSG00000031799	ProperStrand	11	chr3	123210854	123210876	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.2109
chr5	28108795	28108885	protein_coding	Paxip1	intron	ENSMUSG00000002221	ProperStrand	34	chr4	131908239	131908319	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.3115
chr2	29871468	29871535	protein_coding	Spna2	exon	ENSMUSG00000057738	ProperStrand	222	chr9	28982468	28982486	protein_coding	Ntm	intron	ENSMUSG00000059974	ProperStrand	49	2	-17.5053
chr11	117588329	117588397	protein_coding	Tnrc6c	intron	ENSMUSG00000025571	ProperStrand	51	chr16	23110911	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.0517
chr8	111238939	111238955	protein_coding	Zfhx3	utr5	ENSMUSG00000038872	ProperStrand	65	chr11	97642952	97643087	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-4.1528
chr17	37206967	37207007	protein_coding	Gabbr1	exon	ENSMUSG00000024462	ProperStrand	27	chr3	135101654	135101754	protein_coding	Ube2d3	utr5	ENSMUSG00000078578	ProperStrand	34	1	-16.0738
chr17	56575539	56577213	protein_coding	Ptprs	exon	ENSMUSG00000013236	ProperStrand	152	chr18	35714169	35714259	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-1.8471
chr4	138082437	138082472	Low_complexity	GA-rich	Low_complexity	chr4GA-rich138082395	ProperStrand	2	chr11	97642952	97643011	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-inf
chrX	127781092	127781112	LINE	Lx	L1	chrXLx127780898	ProperStrand	24	chr11	106993354	106993391	protein_coding	Bptf	utr5	ENSMUSG00000040481	ProperStrand	70	1	-14.8702
chrX	70926647	70926738	protein_coding	Slc6a8	utr3	ENSMUSG00000019558	ProperStrand	47	chr19	8799582	8799631	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-7.2527
chr14	51427126	51427216	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr6	85396221	85396301	protein_coding	Smyd5	utr3	ENSMUSG00000033706	NonProperStrand	30	1	-8.5996
chr9	72570483	72570553	protein_coding	Nedd4	intron	ENSMUSG00000032216	ProperStrand	308	chr1	92678239	92678255	protein_coding	Col6a3	exon	ENSMUSG00000048126	NonProperStrand	44	1	-10.6602
chr8	59992818	59992843	protein_coding	Hmgb2	exon	ENSMUSG00000054717	ProperStrand	184	chr9	15118322	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	3	-4.5429
chr13	67002499	67003689	protein_coding	Uqcrb	exon	ENSMUSG00000021520	ProperStrand	5	chr8	32260335	32260421	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-9.7163
chr7	31737348	31737397	protein_coding	Usf2	intron	ENSMUSG00000058239	ProperStrand	8	chr16	23111389	23111479	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.8232
chr11	97891662	97891685	protein_coding	Rpl19	exon	ENSMUSG00000017404	ProperStrand	120	chr1	17087852	17087868	protein_coding	Jph1	utr5	ENSMUSG00000042686	ProperStrand	39	1	-12.7899
chr17	29125047	29125137	protein_coding-noncoding	Stk38	utr3	ENSMUSG00000024006	ProperStrand	2	chr4	131866160	131866240	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-10.9862
chr9	56775853	56775870	protein_coding	Snx33	utr5	ENSMUSG00000032733	NonProperStrand	116	chr5	108336363	108336463	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-3.6337
chr11	115706712	115706812	protein_coding	Llgl2	exon	ENSMUSG00000020782	ProperStrand	62	chr8	73419711	73419729	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.0713
chr11	48616643	48616706	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	chr18	35716782	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-0.8932
chr10	58275560	58275618	pseudogene	Gm9987	.	ENSMUSG00000055958	NonProperStrand	1	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr2	144091688	144091967	protein_coding	Snx5	intron	ENSMUSG00000027423	ProperStrand	64	chr2	144091750	144091858	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	ProperStrand	549	13	-24.8549
chr4	131908809	131908921	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr2	145077959	145209256	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-2.0308
chr17	23874081	23874098	protein_coding	Paqr4	utr3	ENSMUSG00000023909	ProperStrand	20	chr9	15119631	15119759	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.6697
chr7	95266597	95266613	protein_coding	Grm5	intron	ENSMUSG00000049583	NonProperStrand	145	chr8	73419659	73419726	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-1.6541
chr1	7163289	7163306	protein_coding	Pcmtd1	utr3	ENSMUSG00000051285	NonProperStrand	5	chr16	23110909	23110957	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr7	74182812	74182892	protein_coding	Adamts17	intron	ENSMUSG00000058145	ProperStrand	44	chr18	35716787	35716877	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.6971
chr2	20610568	20610584	protein_coding	Etl4	intron	ENSMUSG00000036617	ProperStrand	86	chr3	68889342	68889369	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-2.6183
chr19	9016432	9016567	protein_coding	Mta2	utr5	ENSMUSG00000071646	ProperStrand	70	chrX	34622916	34622941	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-2.8954
chr17	4082091	4082316	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	5	-0.9579
chr11	78086787	78086944	protein_coding	2610507B11Rik	exon	ENSMUSG00000010277	ProperStrand	246	chr9	21538194	21538274	protein_coding	Ldlr	exon	ENSMUSG00000032193	ProperStrand	60	1	-10.4844
chr11	78086787	78086944	protein_coding	2610507B11Rik	exon	ENSMUSG00000010277	ProperStrand	246	chr5	112737326	112737351	protein_coding	Tpst2	exon	ENSMUSG00000029344	ProperStrand	34	1	-11.6307
chr5	30595109	30595199	protein_coding	Ept1	utr3	ENSMUSG00000075703	ProperStrand	18	chr11	97642958	97643038	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.6997
chr15	88998392	89001021	protein_coding	Plxnb2	utr5	ENSMUSG00000036606	ProperStrand	119	chr2	130101266	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	2	-8.6113
chr3	100750650	100750700	protein_coding-noncoding	Ttf2	utr3	ENSMUSG00000033222	ProperStrand	24	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.0229
chr5	115939497	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr1	172975145	172975189	tRNA	tRNA699-GlyGCC	.	22998	ProperStrand	660	14	-20.3964
chr13	97266788	97271487	protein_coding	Polk	exon	ENSMUSG00000021668	ProperStrand	16	chr13	81699843	81699859	protein_coding	Gpr98	exon	ENSMUSG00000069170	ProperStrand	16	1	-18.8944
chr12	84033575	84033592	protein_coding	Rgs6	intron	ENSMUSG00000021219	ProperStrand	15	chr7	117189876	117189922	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-6.0110
chr3	104607879	104607895	protein_coding	Mov10	exon	ENSMUSG00000002227	ProperStrand	96	chr18	75160711	75160734	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	1	-8.2473
chr8	3614249	3614265	protein_coding	Xab2	exon	ENSMUSG00000019470	ProperStrand	52	chr11	69483237	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.6966
chr7	30231467	30231547	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	chr2	144087380	144087450	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-2.3645
chr9	20713029	20713055	protein_coding	Dnmt1	exon	ENSMUSG00000004099	ProperStrand	91	chr2	44519251	44519268	protein_coding	Gtdc1	intron	ENSMUSG00000036890	ProperStrand	22	1	-14.5059
chr7	133592210	133592226	protein_coding	Atp2a1	exon	ENSMUSG00000030730	ProperStrand	49	chr2	26493387	26493420	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-4.1229
chr14	33153227	33153832	protein_coding	Ogdhl	exon	ENSMUSG00000021913	ProperStrand	182	chr18	35714207	35714261	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-2.9231
chr11	100879939	100881849	protein_coding	Atp6v0a1	exon	ENSMUSG00000019302	ProperStrand	27	chr7	116663674	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	20	-inf
chr11	116806228	116806270	protein_coding	Mgat5b	exon	ENSMUSG00000043857	ProperStrand	21	chr17	35089181	35089225	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-7.5760
chr14	71005171	71005735	protein_coding	Epb4.9	exon	ENSMUSG00000022099	ProperStrand	48	chr18	35714187	35714267	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-6.5138
chr10	75969116	75969220	protein_coding	Mcm3ap	exon	ENSMUSG00000001150	ProperStrand	95	chr12	104649045	104649069	protein_coding	Ddx24	intron	ENSMUSG00000041645	ProperStrand	34	1	-13.5361
chr1	182745764	182745781	antisense	Gm16067	.	ENSMUSG00000073485	ProperStrand	25	chr4	155384218	155384265	protein_coding	Sdf4	utr3	ENSMUSG00000029076	ProperStrand	20	1	-17.2448
chr10	85099241	85099258	protein_coding	Btbd11	intron	ENSMUSG00000020042	ProperStrand	13	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.5141
chr12	58691976	58691992	antisense	4921518K17Rik	.	ENSMUSG00000085851	ProperStrand	75	chr14	33005110	33005138	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-3.5777
chr7	52071767	52071847	protein_coding	Il4i1	utr5	ENSMUSG00000074141	ProperStrand	12	chr4	131865426	131865516	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-7.1824
chr4	115484063	115484085	protein_coding	Atpaf1	utr3	ENSMUSG00000028710	ProperStrand	202	chr7	134671404	134671504	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-5.4762
chr4	131908417	131908456	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr1	162968481	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-0.8566
chr8	47868739	47868757	protein_coding	Irf2	intron	ENSMUSG00000031627	NonProperStrand	33	chr17	24857718	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.3507
chr2	24262964	24263018	protein_coding	Psd4	utr3	ENSMUSG00000026979	ProperStrand	7	chr17	35087926	35087946	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-9.5701
chr17	39985062	39985133	pseudogene	AY036118	.	ENSMUSG00000045999	ProperStrand	57	chr4	131865853	131865953	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	NonProperStrand	39	1	-14.2776
chr11	62416890	62416949	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr2	179185114	179185130	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	1	-6.8859
chr9	53664975	53665098	protein_coding	Slc35f2	utr3	ENSMUSG00000042195	ProperStrand	65	chr2	41199972	41199989	protein_coding	Lrp1b	exon	ENSMUSG00000049252	ProperStrand	376	6	-19.5801
chr2	4829164	4829180	protein_coding	Sephs1	utr3	ENSMUSG00000026662	NonProperStrand	271	chr2	103608981	103609008	protein_coding	Caprin1	exon	ENSMUSG00000027184	ProperStrand	145	1	-8.5241
chr8	46038223	46038675	protein_coding	Fat1	exon	ENSMUSG00000070047	ProperStrand	306	chr9	120038547	120038672	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-1.3340
chr17	39979943	39980044	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr12	50485931	50485947	protein_coding	Foxg1	exon	ENSMUSG00000020950	NonProperStrand	26	1	-8.9034
chr13	68959073	68959090	protein_coding	Adcy2	intron	ENSMUSG00000021536	ProperStrand	237	chr12	110887828	110887854	snoRNA	ENSMUSG00000084549_SNORD113	.	ENSMUSG00000084549	ProperStrand	196	1	-8.1906
chr13	60837017	60837037	protein_coding	Dapk1	intron	ENSMUSG00000021559	ProperStrand	109	chr6	70794803	70794819	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	1	-10.2227
chr13	74832243	74833342	protein_coding	Cast	utr3	ENSMUSG00000021585	ProperStrand	7	chr7	112782969	112782985	protein_coding	Arfip2	utr3	ENSMUSG00000030881	ProperStrand	191	1	-15.4229
chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	chr16	56035948	56036001	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	1	-5.5071
chr1	34221991	34362089	protein_coding	Dst	exon	ENSMUSG00000026131	ProperStrand	461	chr16	23110830	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	26	-3.1380
chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr11	62416574	62416656	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	4	-1.3041
chr8	127407452	127407468	protein_coding	Gnpat	exon	ENSMUSG00000031985	NonProperStrand	13	chr7	51505506	51505573	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	1	-11.8933
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr17	39985440	39985763	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	3	-1.4603
chr11	96681384	96681441	protein_coding	Nfe2l1	exon	ENSMUSG00000038615	ProperStrand	118	chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-4.5317
chr11	90510237	90510280	protein_coding	Tom1l1	intron	ENSMUSG00000020541	ProperStrand	7	chr5	111121061	111121161	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-10.8345
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr7	20310054	20310070	protein_coding	Pvrl2	exon	ENSMUSG00000062300	ProperStrand	110	1	-9.2127
chr4	141697009	141697027	protein_coding	Kazn	utr3	ENSMUSG00000040606	NonProperStrand	12	chr3	68889152	68889202	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-6.3834
chr2	22444457	22444505	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	chr1	162968215	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-1.7212
chrX	103398910	103398974	protein_coding	Pgk1	utr3	ENSMUSG00000062070	ProperStrand	484	chr11	77996584	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-2.2197
chr4	43505736	43505930	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr3	122243411	122243494	protein_coding	Fnbp1l	utr3	ENSMUSG00000039735	ProperStrand	37	25	-inf
chr10	60561427	60561472	protein_coding	Sgpl1	utr3	ENSMUSG00000020097	ProperStrand	34	chr1	162965531	162965556	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.3385
chr1	187110783	187110855	protein_coding	Iars2	utr3	ENSMUSG00000026618	ProperStrand	68	chr4	132530099	132530117	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	1	-9.3490
chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	chr18	73693163	73693187	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-1.3558
chr9	4299367	4302483	protein_coding	Aasdhppt	exon	ENSMUSG00000025894	ProperStrand	121	chr2	26493370	26493445	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-2.4870
chr8	74446729	74446745	protein_coding	Zfp617	intron	ENSMUSG00000066880	NonProperStrand	208	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-4.7689
chrX	148341561	148341604	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	chr10	90076969	90076990	protein_coding	Anks1b	intron	ENSMUSG00000058589	NonProperStrand	230	1	-6.3939
chr2	34761099	34761116	protein_coding	Phf19	exon	ENSMUSG00000026873	ProperStrand	8	chr1	164627933	164627977	protein_coding	Prrc2c	exon	ENSMUSG00000040225	ProperStrand	413	1	-13.5866
chr19	41306837	41306868	protein_coding	Tm9sf3	utr3	ENSMUSG00000025016	ProperStrand	21	chr11	62416973	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-8.1441
chr3	126626539	126626621	protein_coding	Ank2	utr3	ENSMUSG00000032826	ProperStrand	30	chr9	15119722	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.8898
chr15	99539747	99539837	protein_coding	Smarcd1	exon	ENSMUSG00000023018	ProperStrand	43	chr15	98350146	98350187	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-5.4077
chr6	87863895	87863912	lincRNA	Gm16723	intron	ENSMUSG00000085703	ProperStrand	13	chr2	130103432	130103503	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-11.1722
chr3	98021437	98021456	LINE	Lx5	L1	chr3Lx598020708	ProperStrand	5	chr4	131908810	131908878	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.7672
chr10	119581321	119581401	protein_coding	Irak3	intron	ENSMUSG00000020227	ProperStrand	2	chr16	23110852	23110942	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr11	96721909	96721926	protein_coding	Copz2	intron	ENSMUSG00000018672	ProperStrand	11	chr19	45092566	45092584	protein_coding	Lzts2	intron	ENSMUSG00000035342	NonProperStrand	2	1	-inf
chr5	143533675	143533765	protein_coding	Tnrc18	exon	ENSMUSG00000039477	ProperStrand	39	chr9	15119672	15119752	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.4004
chr1	52707086	52707199	protein_coding	Tmem194b	utr3	ENSMUSG00000043015	ProperStrand	4	chrX	34622906	34622946	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-8.6589
chr18	11518058	11518075	LTR	MLT1N2	MaLR	chr18MLT1N211517715	ProperStrand	1	chr10	80643994	80644086	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-inf
chr19	42593739	42593755	protein_coding	D19Ertd386e	intron	ENSMUSG00000025184	ProperStrand	4	chr2	22444075	22444124	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-13.4435
chrX	7752870	7752886	protein_coding	Tbc1d25	exon	ENSMUSG00000039201	ProperStrand	126	chr2	130103751	130103802	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-6.9940
chr5	130100544	130113630	protein_coding	Mmp17	exon	ENSMUSG00000029436	ProperStrand	17	chr16	23110829	23110991	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-7.6481
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr18	35102297	35102361	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	3	-1.6864
chr11	62416575	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	chr5	74489542	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	18	-2.1297
chr2	155747462	155755772	protein_coding	Uqcc	utr5	ENSMUSG00000005882	ProperStrand	13	chr12	114290175	114290191	protein_coding	Pacs2	intron	ENSMUSG00000021143	NonProperStrand	302	1	-13.1932
chr7	134338920	134339020	protein_coding	Cd2bp2	utr5	ENSMUSG00000042502	ProperStrand	73	chr17	35087895	35087946	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-4.8206
chr14	55544860	55544880	protein_coding	Efs	utr5	ENSMUSG00000022203	ProperStrand	7	chr3	123210854	123210939	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-6.1463
chr11	87240282	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	chr19	8798740	8798782	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-2.6657
chr10	19077409	19077425	protein_coding	Olig3	utr3	ENSMUSG00000045591	NonProperStrand	3	chr16	23110841	23110906	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr6	142444190	142444215	protein_coding	Ldhb	exon	ENSMUSG00000030246	ProperStrand	224	chr17	17097506	17097606	protein_coding	BC002059	intron	ENSMUSG00000060149	ProperStrand	10	3	-19.8435
chr1	137196865	137196906	LTR	ORR1B1	MaLR	chr1ORR1B1137196645	NonProperStrand	3	chr4	131908689	131908764	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-inf
chr11	86062469	86062757	protein_coding	Ints2	exon	ENSMUSG00000018068	ProperStrand	17	chr16	23110829	23110862	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.8783
chr16	23110454	23110542	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	chr7	16524110	16524205	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	4	-1.7649
chr8	87340233	87340249	protein_coding	Dand5	exon	ENSMUSG00000053226	ProperStrand	34	chr16	23110829	23110860	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.8923
chr19	10937772	10937843	protein_coding	Tmem132a	exon	ENSMUSG00000024736	ProperStrand	26	chr17	35384173	35384195	snoRNA	ENSMUSG00000065273_SNORD83	.	ENSMUSG00000065273	ProperStrand	244	1	-12.1931
chr16	13799989	13800083	protein_coding	Rrn3	exon	ENSMUSG00000022682	ProperStrand	58	chr9	47596092	47596126	protein_coding	Cadm1	exon	ENSMUSG00000032076	ProperStrand	77	2	-20.2733
chr4	118806996	118807040	protein_coding	Slc2a1	exon	ENSMUSG00000028645	ProperStrand	361	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-0.7814
chr5	23031345	23031362	protein_coding	Srpk2	exon	ENSMUSG00000062604	ProperStrand	51	chr16	23111406	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-2.8058
chr18	10052128	10052150	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr17	35087895	35087951	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-1.2687
chr7	133643646	133643696	protein_coding	Atxn2l	exon	ENSMUSG00000032637	ProperStrand	219	chr1	58228679	58228696	protein_coding	Aox3	exon	ENSMUSG00000064294	ProperStrand	39	1	-11.5851
chr2	29667886	29668078	protein_coding	Slc27a4	exon	ENSMUSG00000059316	ProperStrand	24	chr4	131865860	131865986	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-11.4898
chr2	91314972	91315366	protein_coding	Lrp4	exon	ENSMUSG00000027253	ProperStrand	16	chr4	131908689	131908752	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.4136
chr7	148595793	148596742	protein_coding	Pddc1	exon	ENSMUSG00000051007	ProperStrand	10	chr11	106362669	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	3	-19.4699
chr8	96560703	96560793	protein_coding	Nudt21	utr5	ENSMUSG00000031754	ProperStrand	33	chr11	69483195	69483236	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.5168
chr6	50264595	50264695	protein_coding	Osbpl3	intron	ENSMUSG00000029822	ProperStrand	34	chr8	73419657	73419708	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.1854
chr5	54389948	54389965	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	chr10	31299337	31299353	protein_coding	Rnf217	intron	ENSMUSG00000063760	ProperStrand	33	1	-11.9887
chr4	134878386	134878404	protein_coding	Srrm1	exon	ENSMUSG00000028809	NonProperStrand	25	chr9	64925857	64925912	protein_coding	Dpp8	exon	ENSMUSG00000032393	ProperStrand	31	2	-19.3959
chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr12	17552949	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	2	-1.3337
chr4	131908815	131908895	lincRNA	Gm17300	exon	ENSMUSG00000091021	ProperStrand	109	chr9	54298692	54298709	protein_coding	Dmxl2	exon	ENSMUSG00000041268	ProperStrand	18	1	-14.5489
chrX	152009278	152009294	protein_coding	Ptchd1	exon	ENSMUSG00000041552	NonProperStrand	294	chr14	76247711	76247772	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-1.4464
chr17	46814084	46814100	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr7	13516163	13516211	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	1	-4.6568
chr3	102961664	102961744	protein_coding	Dennd2c	exon	ENSMUSG00000007379	ProperStrand	19	chr7	117189889	117189978	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-5.5364
chr11	97891166	97891651	protein_coding	Rpl19	exon	ENSMUSG00000017404	ProperStrand	120	chr11	34935071	34935089	protein_coding	Slit3	exon	ENSMUSG00000056427	ProperStrand	61	1	-11.8876
chr4	98495957	98495990	LTR	RLTR16	ERVK	chr4RLTR1698495882	NonProperStrand	1	chr5	87237836	87237936	protein_coding	Ythdc1	intron	ENSMUSG00000035851	ProperStrand	45	1	-inf
chr17	39985192	39985286	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr2	166890842	166890858	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	1	-3.1578
chr1	84721182	84790331	protein_coding	Trip12	exon	ENSMUSG00000026219	ProperStrand	248	chr1	162965980	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	5	-7.1931
chr2	180395592	180395644	protein_coding	Dido1	exon	ENSMUSG00000038914	ProperStrand	81	chr11	69483161	69483251	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.9541
chr1	34285406	34285479	protein_coding	Dst	exon	ENSMUSG00000026131	ProperStrand	461	chr2	26493366	26493483	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	11	-14.5843
chr2	84442384	84442780	protein_coding	Ctnnd1	utr3	ENSMUSG00000034101	ProperStrand	26	chr5	108334260	108336495	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-10.5892
chr8	24049242	24049302	protein_coding	Myst3	exon	ENSMUSG00000031540	ProperStrand	111	chr19	8800380	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-4.3040
chr11	82692732	82692832	protein_coding	Rad51l3	exon	ENSMUSG00000018841	ProperStrand	112	chr3	123210854	123210887	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.1403
chr13	95335959	95336049	protein_coding	Ap3b1	utr3	ENSMUSG00000021686	ProperStrand	96	chr4	131865411	131865491	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-3.1365
chr2	90235293	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chrX	93136011	93136027	protein_coding	Las1l	exon	ENSMUSG00000057421	ProperStrand	248	1	-1.9370
chr4	133309196	133309229	protein_coding	Arid1a	utr5	ENSMUSG00000007880	ProperStrand	465	chr4	153333875	153333892	protein_coding	A430005L14Rik	exon	ENSMUSG00000047613	NonProperStrand	17	1	-11.7725
chr4	133560929	133560999	protein_coding	Lin28a	utr3	ENSMUSG00000050966	ProperStrand	55	chr8	95505795	95505812	protein_coding	Slc6a2	exon	ENSMUSG00000055368	NonProperStrand	21	1	-15.5905
chr11	116295887	116299339	protein_coding	Fam100b	exon	ENSMUSG00000050628	ProperStrand	97	chr15	34370548	34370638	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-2.6872
chr16	20660438	20660473	protein_coding	Psmd2	exon	ENSMUSG00000006998	ProperStrand	99	chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	1	-7.5048
chr12	88035120	88035220	protein_coding	Vash1	utr3	ENSMUSG00000021256	ProperStrand	12	chr9	15118327	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-10.7922
chrX	7141370	7141506	protein_coding	Ppp1r3f	intron	ENSMUSG00000039556	ProperStrand	23	chr17	13112564	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-6.4633
chr2	130101997	130102087	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	chr10	107800729	107800809	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	1	-0.9015
chr6	54379743	54379760	lincRNA	9130019P16Rik	exon	ENSMUSG00000073067	ProperStrand	255	chr5	65660229	65660272	protein_coding	Rfc1	exon	ENSMUSG00000029191	ProperStrand	53	1	-10.6623
mmu-miR-6240	2	23	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr9	26807044	26807060	protein_coding	Acad8	exon	ENSMUSG00000031969	ProperStrand	4	1	-11.5429
chr1	71678640	71678674	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr2	31924012	31924028	protein_coding	Fam78a	utr3	ENSMUSG00000050592	NonProperStrand	340	1	-4.4384
chr8	73419555	73419861	protein_coding	Rpl18a	exon	ENSMUSG00000045128	ProperStrand	394	chr15	5068442	5068480	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-2.5435
chr7	31226138	31226721	protein_coding	Aplp1	exon	ENSMUSG00000006651	ProperStrand	29	chr4	131908689	131908806	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	6	-14.2073
chr1	162965980	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	chr10	90644866	90644897	tRNA	tRNA856-AspGTC	.	534828	ProperStrand	65	2	-5.8908
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr3	103568464	103568485	protein_coding	Hipk1	exon	ENSMUSG00000008730	ProperStrand	23	1	-9.9088
chr11	3821802	3821834	protein_coding	Tcn2	intron	ENSMUSG00000020432	ProperStrand	7	chr2	26494708	26494807	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	3	-17.1529
chr14	51427236	51427320	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr1	162968213	162968244	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-1.3038
chr7	134929776	134929829	protein_coding	Setd1a	exon	ENSMUSG00000042308	ProperStrand	58	chr1	162966016	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-3.6661
chr4	138576794	138576810	protein_coding	Tmco4	exon	ENSMUSG00000041143	ProperStrand	47	chr8	73419825	73419866	protein_coding	Rpl18a	exon	ENSMUSG00000045128	ProperStrand	394	1	-10.0351
chr3	124572063	124572143	LINE	Lx3C	L1	chr3Lx3C124571498	ProperStrand	1	chr4	108420261	108420351	protein_coding	Zfyve9	intron	ENSMUSG00000034557	ProperStrand	14	1	-inf
chr15	78909478	78912038	protein_coding	Eif3l	exon	ENSMUSG00000033047	ProperStrand	81	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-8.3784
chr11	77319994	77320084	protein_coding	Git1	exon	ENSMUSG00000011877	ProperStrand	95	chr11	97643009	97643089	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.7248
chr9	114526946	114526964	protein_coding	Cnot10	exon	ENSMUSG00000056167	ProperStrand	16	chr16	23111431	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.4608
chr9	103115583	103115601	protein_coding	Gm20425	intron	ENSMUSG00000090639	ProperStrand	22	chr1	88247744	88247768	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-7.0846
chr19	6961624	6961641	SINE	B1_Mus1	Alu	chr19B1_Mus16961613	ProperStrand	1	chr19	8963027	8963084	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-inf
chr2	152106311	152106359	protein_coding	Csnk2a1	utr3	ENSMUSG00000074698	ProperStrand	91	chr6	115758103	115758120	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-4.6657
chr12	114375069	114375085	protein_coding	Mta1	utr3	ENSMUSG00000021144	NonProperStrand	11	chr7	29136553	29136649	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.5623
chr11	118133467	118133507	protein_coding	Usp36	exon	ENSMUSG00000033909	ProperStrand	27	chr4	131908356	131908412	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.7097
chr10	121307271	121307293	protein_coding	Srgap1	intron	ENSMUSG00000020121	ProperStrand	33	chr2	57090809	57090826	protein_coding	Gpd2	utr5	ENSMUSG00000026827	ProperStrand	93	1	-13.6392
chr11	77679402	77679450	protein_coding	Myo18a	utr3	ENSMUSG00000000631	ProperStrand	124	chrX	71195708	71195771	protein_coding	Hcfc1	exon	ENSMUSG00000031386	ProperStrand	424	1	-7.9461
chr3	137849424	137849440	protein_coding	4930579F01Rik	utr5	ENSMUSG00000012042	NonProperStrand	156	chr11	62416991	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-4.1968
chr7	81124256	81124278	protein_coding	St8sia2	intron	ENSMUSG00000025789	NonProperStrand	6	chr5	74489600	74489640	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-8.4105
chrX	100614203	100614222	protein_coding	Tsx	intron	ENSMUSG00000031329	ProperStrand	1	chr15	34370545	34370618	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-inf
chr4	43505656	43505722	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr3	107470104	107470127	protein_coding	Ahcyl1	exon	ENSMUSG00000027893	ProperStrand	81	2	-4.4733
chr15	81110991	81111009	SINE	ID4	ID	chr15ID481110956	ProperStrand	272	chr12	92811955	92812014	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	1	-5.5814
chr6	134827264	134827316	protein_coding	Gpr19	utr5	ENSMUSG00000032641	ProperStrand	27	chr16	23111709	23111799	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-8.3424
chr1	133821181	133824703	protein_coding	Nucks1	exon	ENSMUSG00000026434	ProperStrand	59	chrX	103398841	103398880	protein_coding	Pgk1	utr3	ENSMUSG00000062070	ProperStrand	484	1	-9.1673
chr11	106852068	106852145	protein_coding	Kpna2	exon	ENSMUSG00000018362	ProperStrand	70	chr9	50816824	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	1	-11.4982
chr12	85514311	85514327	protein_coding	C130039O16Rik	exon	ENSMUSG00000042507	ProperStrand	75	chr3	94207826	94207843	protein_coding	Lingo4	utr3	ENSMUSG00000044505	NonProperStrand	7	1	-17.3461
chr2	69701350	69708842	protein_coding	Ssb	exon	ENSMUSG00000068882	ProperStrand	37	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-5.5936
chr13	51743549	51743574	protein_coding	Cks2	intron	ENSMUSG00000062248	ProperStrand	26	chr16	23111777	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.3497
chr10	21833368	21833458	LTR	RLTR10B2	ERVK	chr10RLTR10B221833243	ProperStrand	1	chr10	8564566	8564656	protein_coding	Sash1	intron	ENSMUSG00000015305	ProperStrand	23	1	-inf
chr10	127819733	127819967	protein_coding	Ankrd52	exon	ENSMUSG00000014498	ProperStrand	26	chr9	15119668	15119758	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.1620
chr12	88042346	88042436	protein_coding	Angel1	utr3	ENSMUSG00000021257	ProperStrand	12	chr4	131865856	131865936	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.6729
chr3	140628960	140629040	LINE	L1_Rod	L1	chr3L1_Rod140628912	NonProperStrand	1	chr3	140629324	140629414	LTR	MTA_Mm	MaLR	chr3MTA_Mm140629174	ProperStrand	1	1	-inf
chr16	91227718	91227735	protein_coding	Olig2	utr3	ENSMUSG00000039830	NonProperStrand	78	chrX	149828130	149828146	protein_coding	Klf8	utr3	ENSMUSG00000041649	NonProperStrand	107	1	-11.6240
chr17	24813593	24814049	protein_coding	Zfp598	exon	ENSMUSG00000041130	ProperStrand	26	chr4	131908718	131908808	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.5345
chr5	64203925	64203942	protein_coding	0610040J01Rik	intron	ENSMUSG00000060512	ProperStrand	36	chr4	122968584	122968656	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-7.2971
chr9	40613208	40613244	protein_coding	Hspa8	utr3	ENSMUSG00000015656	ProperStrand	798	chr18	75161559	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-2.3271
chr13	6586343	6587818	protein_coding	Pfkp	exon	ENSMUSG00000021196	ProperStrand	197	chr2	144087324	144087381	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-4.2390
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr17	39985544	39985617	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	2	-3.4492
chr1	93049595	93049612	protein_coding	Rbm44	exon	ENSMUSG00000070732	NonProperStrand	1	chr11	6319551	6319619	protein_coding	Ppia	utr3	ENSMUSG00000071866	ProperStrand	127	1	-inf
chrX	90550893	90550984	protein_coding	Pola1	utr3	ENSMUSG00000006678	ProperStrand	83	chr5	130300420	130300551	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	45	-21.6651
chr6	121423179	121423195	protein_coding	Iqsec3	utr5	ENSMUSG00000040797	NonProperStrand	139	chr7	29136555	29136600	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.0945
mmu-miR-6240	1	26	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr17	13115684	13115784	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	2	-1.8250
chr8	86249783	86249819	protein_coding	Ddx39	utr3	ENSMUSG00000005481	ProperStrand	24	chrX	20497774	20497792	protein_coding	Syn1	exon	ENSMUSG00000037217	NonProperStrand	2	1	-inf
chr1	74696365	74696445	LTR	MT2A	ERVL	chr1MT2A74696093	ProperStrand	1	chr1	186743082	186743172	protein_coding	Mark1	intron	ENSMUSG00000026620	ProperStrand	6	1	-inf
chr8	123196728	123196779	protein_coding	Cox4i1	exon	ENSMUSG00000031818	ProperStrand	31	chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	1	-9.4381
chr8	72853861	72853878	protein_coding	Gdf1	utr5	ENSMUSG00000055694	NonProperStrand	2	chr5	121655016	121655118	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	NonProperStrand	38	2	-inf
chr12	47505853	47505872	LTR	MLT1A1	MaLR	chr12MLT1A147505856	NonProperStrand	5	chr11	69483136	69483211	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-7.3324
chr8	125627091	125628971	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	chr10	23505152	23505249	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-1.4505
chr16	36071984	36072000	protein_coding	Ccdc58	utr5	ENSMUSG00000075229	NonProperStrand	55	chr10	40021683	40021705	protein_coding	Amd1	utr5	ENSMUSG00000075232	ProperStrand	21	1	-15.5905
chr4	25547569	25547602	protein_coding	Fut9	exon	ENSMUSG00000055373	ProperStrand	10	chr1	162965995	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-7.1350
chr4	139699914	139699933	antisense	Gm13029	.	ENSMUSG00000086164	ProperStrand	5	chr8	123093026	123093053	protein_coding	Gse1	exon	ENSMUSG00000031822	ProperStrand	97	1	-17.5630
mmu-miR-1949	7	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr15	89184377	89184522	protein_coding	Lmf2	exon	ENSMUSG00000022614	ProperStrand	19	1	-10.4748
chr13	9833561	9833660	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr7	27466699	27466715	protein_coding	Cyp2b23	exon	ENSMUSG00000040650	ProperStrand	39	1	-5.7963
chr12	26994663	26994736	protein_coding	Rnf144a	utr3	ENSMUSG00000020642	ProperStrand	15	chr16	23111777	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-10.7873
chr3	100290577	100290594	protein_coding	Fam46c	intron	ENSMUSG00000044468	ProperStrand	4	chr17	39985537	39985628	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-11.5725
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	25066951	25066974	protein_coding	Cobra1	utr5	ENSMUSG00000013465	ProperStrand	17	1	-6.9523
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr7	117189957	117190047	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-1.6937
chr7	139010049	139010065	protein_coding	Fgfr2	intron	ENSMUSG00000030849	NonProperStrand	95	chr9	120039533	120039579	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.5059
chr5	34886082	34886099	protein_coding	Sh3bp2	utr5	ENSMUSG00000054520	ProperStrand	43	chr1	162967489	162967521	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.0966
chr10	79855624	79855736	protein_coding	Mbd3	utr3	ENSMUSG00000035478	ProperStrand	27	chr16	23110980	23111004	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.1875
chr2	31472382	31472476	protein_coding	Fubp3	utr3	ENSMUSG00000026843	ProperStrand	35	chr9	20918701	20918717	protein_coding	Tyk2	exon	ENSMUSG00000032175	ProperStrand	29	1	-15.9113
chr2	166412668	166412704	protein_coding	Prex1	exon	ENSMUSG00000039621	ProperStrand	20	chr17	35087894	35087948	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-7.3834
chr15	84101747	84103941	protein_coding	Parvb	exon	ENSMUSG00000022438	ProperStrand	127	chr9	78326994	78327129	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-4.8709
chr2	127052811	127053635	protein_coding	Snrnp200	exon	ENSMUSG00000003660	ProperStrand	203	chr12	110892837	110892905	snoRNA	ENSMUSG00000064621_AF357355	.	ENSMUSG00000064621	ProperStrand	60	1	-10.8688
chr7	30231467	30231493	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	chr17	24856620	24856682	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-2.2641
chr4	126736078	126736140	protein_coding	Zmym1	exon	ENSMUSG00000043872	ProperStrand	11	chr18	33954849	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-6.8319
chr13	54723202	54723218	protein_coding	Faf2	exon	ENSMUSG00000025873	ProperStrand	90	chr18	35716692	35716756	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.5346
chr2	164257636	164257652	protein_coding	Sdc4	intron	ENSMUSG00000017009	ProperStrand	177	chr19	7358995	7359169	protein_coding	Mark2	exon	ENSMUSG00000024969	ProperStrand	75	1	-10.6943
chr1	71686942	71699687	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr11	106362336	106362386	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	3	-3.3342
chr9	58725960	58728477	protein_coding	Neo1	exon	ENSMUSG00000032340	ProperStrand	35	chr18	35716788	35716868	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.1046
chr10	92944806	92944877	protein_coding	Lta4h	intron	ENSMUSG00000015889	ProperStrand	12	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-10.2486
chr7	129364056	129364181	protein_coding	2010110P09Rik	exon	ENSMUSG00000030865	NonProperStrand	26	chr17	29178686	29178709	protein_coding	Srsf3	utr3	ENSMUSG00000071172	ProperStrand	23	1	-16.8114
chr4	144803206	144803223	LTR	MT2B2	ERVL	chr4MT2B2144803194	NonProperStrand	1	chr1	162965531	162965556	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-inf
chr3	16083589	16083606	protein_coding	Ythdf3	intron	ENSMUSG00000047213	NonProperStrand	18	chr8	26827320	26827337	protein_coding	Whsc1l1	utr3	ENSMUSG00000054823	NonProperStrand	17	1	-18.1717
chr14	51427146	51427210	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	1	-2.1951
chr7	53333473	53334891	protein_coding	Nomo1	exon	ENSMUSG00000030835	ProperStrand	85	chr13	49779780	49779802	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-6.3239
chr1	193220846	193220875	protein_coding	Ppp2r5a	utr5	ENSMUSG00000026626	ProperStrand	16	chr9	57385425	57385441	protein_coding	2310046O06Rik	utr5	ENSMUSG00000032305	ProperStrand	135	1	-14.3742
chr13	95335997	95336043	protein_coding	Ap3b1	utr3	ENSMUSG00000021686	ProperStrand	96	chr7	87235726	87235826	protein_coding	Zfp710	utr3	ENSMUSG00000048897	ProperStrand	229	1	-9.6841
chr11	102060738	102060754	protein_coding	Hdac5	exon	ENSMUSG00000008855	NonProperStrand	39	chr19	8798484	8798508	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-6.0570
chr17	13117223	13117246	protein_coding	Tcp1	exon	ENSMUSG00000068039	ProperStrand	116	chr7	117189991	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.1836
chr15	100299084	100299100	lincRNA	5330439K02Rik	exon	ENSMUSG00000092050	NonProperStrand	36	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-11.4594
chr6	122680134	122681463	protein_coding	Slc2a3	exon	ENSMUSG00000003153	ProperStrand	682	chr1	162965986	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	4	-1.7824
chr10	79874212	79874312	protein_coding	Tcf3	intron	ENSMUSG00000020167	ProperStrand	73	chr7	116663715	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-3.9074
chr7	28146782	28146798	protein_coding	Spnb4	exon	ENSMUSG00000011751	NonProperStrand	84	chr16	23110828	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-2.0285
chr6	28476985	28477651	protein_coding	Snd1	exon	ENSMUSG00000001424	ProperStrand	210	chr9	15119646	15119726	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-0.7840
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr7	36429413	36431178	protein_coding	Pdcd5	exon	ENSMUSG00000030417	ProperStrand	8	1	-12.9758
chr17	46812045	46812061	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr17	45707720	45707984	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	1	-2.8562
chr4	131908689	131908749	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	chr12	110892842	110892907	snoRNA	ENSMUSG00000064621_AF357355	.	ENSMUSG00000064621	ProperStrand	60	1	-1.2237
chrX	84483698	84483730	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr19	8800377	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	7	-3.8677
chr15	80733114	80743752	protein_coding	Tnrc6b	exon	ENSMUSG00000047888	ProperStrand	59	chr9	110549134	110549152	protein_coding	Nbeal2	intron	ENSMUSG00000056724	ProperStrand	161	1	-11.3663
chr2	90235315	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr15	83770046	83770063	protein_coding	Efcab6	intron	ENSMUSG00000022441	ProperStrand	60	1	-4.4627
chr10	6367860	6373095	protein_coding	Mthfd1l	exon	ENSMUSG00000040675	ProperStrand	50	chr18	35714168	35714258	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-3.7805
chr17	25020761	25021100	protein_coding	Nubp2	exon	ENSMUSG00000039183	ProperStrand	8	chr8	129468799	129468879	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-8.4652
chr5	74489193	74489224	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr15	83209613	83210156	protein_coding	Pacsin2	exon	ENSMUSG00000016664	ProperStrand	30	1	-6.9960
chr10	120849375	120849391	protein_coding	Rassf3	utr3	ENSMUSG00000025795	ProperStrand	26	chr19	8799021	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-7.4977
chr15	77949855	77949872	protein_coding	Cacng2	utr5	ENSMUSG00000019146	ProperStrand	11	chr2	26494763	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-6.3982
chr2	145076804	145209253	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	chr5	108334241	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	2	-0.9796
chr8	109192952	109193264	protein_coding	Cdh1	utr3	ENSMUSG00000000303	ProperStrand	283	chr11	69483135	69483211	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	4	-2.4794
chr7	109569940	109569979	protein_coding	Stim1	exon	ENSMUSG00000030987	ProperStrand	24	chr11	97642952	97643094	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	5	-17.2909
chr14	29254491	29254508	protein_coding	Erc2	intron	ENSMUSG00000040640	NonProperStrand	10	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-9.4709
chr17	48012833	48014139	protein_coding	Foxp4	exon	ENSMUSG00000023991	ProperStrand	27	chr1	120355714	120355781	snRNA	ENSMUSG00000080542_U4atac	.	ENSMUSG00000080542	ProperStrand	73	3	-20.1767
chr4	134490472	134490562	protein_coding-noncoding	Syf2	utr5	ENSMUSG00000028821	ProperStrand	1	chr4	134490308	134490398	protein_coding	Syf2	intron	ENSMUSG00000028821	ProperStrand	7	1	-inf
chr1	33828651	33828669	protein_coding	Zfp451	intron	ENSMUSG00000042197	NonProperStrand	393	chr15	79908929	79908952	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-2.0413
chr7	116663634	116663767	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	chr4	56910496	56910629	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	34	-8.8179
chr2	105012751	105012769	protein_coding	Wt1	utr3	ENSMUSG00000016458	NonProperStrand	338	chr2	144087324	144087443	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-3.2415
chr9	110843321	110844920	protein_coding	Tdgf1	exon	ENSMUSG00000032494	ProperStrand	218	chr4	56910548	56910628	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-3.6335
chr8	11217915	11218005	protein_coding	Col4a1	exon	ENSMUSG00000031502	ProperStrand	64	chr19	8963097	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.1678
chr4	131865381	131865516	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	chr6	125136463	125136563	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	20	-12.3753
chr11	106362560	106362660	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	chr1	9932550	9932595	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-2.1545
chr10	74703943	74707858	protein_coding	Specc1l	exon	ENSMUSG00000033444	ProperStrand	36	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-9.2058
chr14	47808947	47808963	protein_coding	Gch1	utr5	ENSMUSG00000037580	NonProperStrand	31	chr1	162965531	162966814	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.5161
chr13	9833580	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr3	104259970	104259992	protein_coding	Lrig2	utr3	ENSMUSG00000032913	ProperStrand	10	1	-8.5576
chr6	115757992	115758092	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr7	52382753	52382814	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	2	-0.7532
chr15	79392908	79392928	protein_coding	Dmc1	utr3	ENSMUSG00000022429	ProperStrand	8	chr4	131908689	131908753	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.7736
chr9	31019330	31019347	protein_coding	Aplp2	utr5	ENSMUSG00000031996	ProperStrand	172	chr5	67418377	67418394	protein_coding	Limch1	intron	ENSMUSG00000037736	NonProperStrand	10	1	-14.8628
chr14	48344604	48345652	protein_coding	Ktn1	exon	ENSMUSG00000021843	ProperStrand	64	chr2	130102006	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-5.2309
chr12	113895552	113895568	protein_coding	Akt1	exon	ENSMUSG00000001729	ProperStrand	9	chr8	77650258	77651177	protein_coding	Mcm5	exon	ENSMUSG00000005410	ProperStrand	199	1	-14.7980
chr2	75505718	75505805	protein_coding	Hnrnpa3	utr3	ENSMUSG00000059005	ProperStrand	289	chr10	39978448	39978480	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	4	-9.0601
chr2	125499562	125499579	protein_coding	Eid1	utr3	ENSMUSG00000091337	ProperStrand	60	chr2	26494708	26494762	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-5.3552
chr16	16337100	16338748	protein_coding	Dnm1l	exon	ENSMUSG00000022789	ProperStrand	29	chr16	23110828	23110889	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0921
chr10	128250893	128250994	protein_coding	Dnajc14	intron	ENSMUSG00000025354	ProperStrand	11	chr12	112779227	112779281	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-8.1733
chr19	44886873	44886931	protein_coding	Pax2	intron	ENSMUSG00000004231	NonProperStrand	4	chr14	31953025	31953118	protein_coding	Stab1	exon	ENSMUSG00000042286	NonProperStrand	127	1	-17.5987
chr1	136308136	136308171	protein_coding	Cyb5r1	utr3	ENSMUSG00000026456	ProperStrand	12	chr10	126436038	126436155	protein_coding	Ctdsp2	utr3	ENSMUSG00000078429	ProperStrand	74	2	-20.2348
chr7	148634702	148634782	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	chr14	76372292	76372382	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	2	-1.3117
chr6	91700360	91702365	protein_coding	Slc6a6	exon	ENSMUSG00000030096	ProperStrand	206	chr6	127540608	127540625	protein_coding	Efcab4b	intron	ENSMUSG00000061414	ProperStrand	4	1	-16.4913
chr10	79755552	79756397	protein_coding	Rps15	exon	ENSMUSG00000063457	ProperStrand	119	chr9	15118355	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-2.2631
chr7	91046332	91046422	protein_coding	Mesdc2	exon	ENSMUSG00000038503	ProperStrand	19	chr1	162965980	162966009	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-5.8254
chrX	34337732	34337796	protein_coding	Slc25a5	exon	ENSMUSG00000016319	ProperStrand	55	chr1	162966812	162966863	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-6.4309
chr2	30591383	30591473	LTR	MTEa	MaLR	chr2MTEa30591300	ProperStrand	2	chr2	30590938	30591018	LTR	RLTR20B2	ERVK	chr2RLTR20B230590933	ProperStrand	2	2	-inf
chr10	74594381	74598670	protein_coding	Bcr	exon	ENSMUSG00000009681	ProperStrand	19	chr9	120039591	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	9	-19.7584
chr2	4974190	4974207	protein_coding	Optn	exon	ENSMUSG00000026672	ProperStrand	451	chr4	41685563	41685613	protein_coding	Sigmar1	utr3	ENSMUSG00000036078	ProperStrand	11	1	-12.7370
chr10	41210413	41214341	protein_coding	Ppil6	exon	ENSMUSG00000078451	ProperStrand	2	chr17	35088957	35089009	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	2	-inf
chr13	24567730	24567766	protein_coding	Cmah	utr3	ENSMUSG00000016756	NonProperStrand	53	chr16	23111777	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-3.7898
chr11	69218017	69218066	protein_coding	Kdm6b	exon	ENSMUSG00000018476	ProperStrand	76	chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	1	-8.9709
chr2	22444763	22444950	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	chr11	62418038	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	4	-4.1038
chr4	107596083	107596100	protein_coding	Cpt2	utr5	ENSMUSG00000028607	NonProperStrand	106	chr15	99433433	99433451	protein_coding	Aqp6	exon	ENSMUSG00000043144	NonProperStrand	45	1	-12.7506
chr17	23955819	23955839	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	chr4	131908688	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-2.8973
chr11	4404097	4404127	protein_coding	Mtmr3	exon	ENSMUSG00000034354	ProperStrand	25	chr3	123210854	123210876	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-9.0406
chrX	7470020	7470120	protein_coding	Slc35a2	utr3	ENSMUSG00000031156	ProperStrand	14	chr4	131865856	131865986	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	12	-inf
chr1	193916097	193916114	protein_coding	Traf5	intron	ENSMUSG00000026637	ProperStrand	13	chr3	123210904	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-4.8751
chr12	58691976	58691992	antisense	4921518K17Rik	.	ENSMUSG00000085851	ProperStrand	75	chr19	5796448	5796506	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	1	-7.1004
chr13	99079937	99086891	protein_coding	Btf3	utr5	ENSMUSG00000021660	ProperStrand	64	chr16	23110828	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	7	-5.3816
chr14	69861577	69861593	protein_coding	Slc25a37	utr3	ENSMUSG00000034248	ProperStrand	37	chr2	112307172	112307234	protein_coding	2900064A13Rik	exon	ENSMUSG00000055943	ProperStrand	1	1	-inf
chr18	35714145	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	chr6	124665249	124665522	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	12	-3.8111
chr7	53247688	53247704	protein_coding	Abcc6	exon	ENSMUSG00000030834	ProperStrand	2	chr2	26493364	26493393	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-11.0703
chr10	79493538	79493554	protein_coding	Hmha1	exon	ENSMUSG00000035697	NonProperStrand	23	chr3	153575114	153575168	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	2	-16.4726
chr19	10688627	10689387	protein_coding	Ddb1	exon	ENSMUSG00000024740	ProperStrand	304	chr7	29136582	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-1.3280
chr7	147130104	147130163	protein_coding	Utf1	exon	ENSMUSG00000047751	ProperStrand	67	chr19	8798742	8798816	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-4.5890
chr11	69553602	69557590	protein_coding	Polr2a	exon	ENSMUSG00000005198	ProperStrand	200	chr15	34370545	34370575	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-2.8359
chr14	35212704	35212747	protein_coding	Mmrn2	exon	ENSMUSG00000041445	ProperStrand	3	chr4	131908809	131908890	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-12.0505
chr1	84790376	84790416	protein_coding	Trip12	exon	ENSMUSG00000026219	ProperStrand	248	chr8	87489521	87489823	protein_coding	Rnaseh2a	exon	ENSMUSG00000052926	ProperStrand	14	1	-13.4318
chr10	88198720	88199871	protein_coding	Arl1	exon	ENSMUSG00000060904	ProperStrand	15	chr8	129468781	129468871	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	3	-16.4053
chr8	98269959	98270062	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	chr1	59748785	59748829	snoRNA	ENSMUSG00000077345_Snord70	.	ENSMUSG00000077345	ProperStrand	61	1	-5.5092
chr19	44188389	44188431	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr4	40670029	40670746	protein_coding	Dnaja1	utr5	ENSMUSG00000028410	ProperStrand	20	1	-10.0139
chr4	132530099	132530116	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	chr15	79908929	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-2.0829
chr10	79174262	79174301	protein_coding	Bsg	exon	ENSMUSG00000023175	ProperStrand	107	chr10	23505221	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	6	-5.7381
chr10	127523097	127523197	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr7	90018952	90018974	protein_coding	Mex3b	utr3	ENSMUSG00000057706	ProperStrand	6	1	-13.4237
chr15	82725599	82725637	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	chr11	106362638	106362674	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-2.8314
chr4	11529959	11529997	protein_coding	Rad54b	intron	ENSMUSG00000078773	ProperStrand	22	chr17	24665420	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-6.9244
chr2	37214676	37214713	protein_coding	Pdcl	utr5	ENSMUSG00000009030	ProperStrand	32	chr4	131865891	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-10.0165
chr7	129222394	129222453	protein_coding	Ubfd1	utr3	ENSMUSG00000030870	ProperStrand	21	chr16	23111689	23111789	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.7491
chr9	40612830	40612921	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	chr7	116663634	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	6	-3.2696
chr13	52742450	52742466	protein_coding	Syk	utr3	ENSMUSG00000021457	NonProperStrand	125	chr6	70794802	70794820	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	1	-9.9485
chr10	77076778	77076827	protein_coding	Sumo3	intron	ENSMUSG00000020265	ProperStrand	31	chr1	182664647	182666837	protein_coding	Acbd3	exon	ENSMUSG00000026499	ProperStrand	67	1	-14.4212
chr17	67528680	67528697	protein_coding	Ptprm	intron	ENSMUSG00000033278	NonProperStrand	11	chr4	131865856	131865880	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.8470
chr15	81305619	81305657	protein_coding	Rbx1	utr3	ENSMUSG00000022400	ProperStrand	78	chr3	108357358	108357419	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-4.0419
chr19	59534008	59534026	protein_coding	Emx2	exon	ENSMUSG00000043969	NonProperStrand	87	chr9	64024929	64024998	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	1	-8.3979
chr2	158451027	158451043	protein_coding	Actr5	exon	ENSMUSG00000037761	NonProperStrand	94	chr2	28906116	28906133	protein_coding	1700101E01Rik	intron	ENSMUSG00000079502	ProperStrand	5	1	-17.3240
chr4	3831701	3831720	protein_coding	Plag1	exon	ENSMUSG00000003282	ProperStrand	8	chr17	24856620	24856687	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-10.5400
chr7	134169397	134169499	protein_coding	Maz	utr5	ENSMUSG00000030678	ProperStrand	42	chr1	162968460	162968505	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-6.7858
chr8	108219296	108219312	protein_coding	Rltpr	exon	ENSMUSG00000050357	ProperStrand	8	chr1	89673562	89673704	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-7.2342
chr12	105709531	105709547	protein_coding	Gsc	utr3	ENSMUSG00000021095	ProperStrand	12	chr11	77996595	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-9.3442
chr3	33956983	33957123	protein_coding	Fxr1	exon	ENSMUSG00000027680	ProperStrand	58	chr5	100817619	100818091	protein_coding	Sec31a	exon	ENSMUSG00000035325	ProperStrand	61	1	-13.3493
chr15	79908242	79908313	protein_coding	Rpl3	utr3	ENSMUSG00000060036	ProperStrand	8342	chr15	75621776	75621792	protein_coding	Zc3h3	intron	ENSMUSG00000075600	NonProperStrand	3	1	-9.8112
chr17	63849262	63849301	protein_coding	Fbxl17	exon	ENSMUSG00000023965	ProperStrand	14	chr4	131865414	131865456	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-6.8658
chr19	9051903	9052088	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	chr8	32260351	32260431	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-1.3180
chr13	102459369	102459448	protein_coding	Pik3r1	exon	ENSMUSG00000041417	ProperStrand	3	chr4	131865919	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.6896
chr1	88253773	88253793	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-1.4875
chr11	99918960	99919040	antisense	Gm11571	.	ENSMUSG00000087581	ProperStrand	2	chr11	99908572	99908662	protein_coding	Krt31	intron	ENSMUSG00000048981	ProperStrand	1	1	-inf
chr3	104600267	104607506	protein_coding	Mov10	exon	ENSMUSG00000002227	ProperStrand	96	chr18	35716835	35716883	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-2.7141
chr8	113574364	113574398	protein_coding	Aars	exon	ENSMUSG00000031960	ProperStrand	355	chr17	27236036	27236052	protein_coding	Itpr3	exon	ENSMUSG00000042644	ProperStrand	137	1	-8.1003
chr12	88778634	88778737	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	chr7	116664798	116664872	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	21	-3.5091
chr4	150271269	150271343	protein_coding	Park7	utr3	ENSMUSG00000028964	ProperStrand	9	chr1	44028574	44029387	protein_coding	Tpp2	exon	ENSMUSG00000041763	ProperStrand	22	1	-19.2845
chr3	89586436	89586469	protein_coding	Ube2q1	utr3	ENSMUSG00000042572	ProperStrand	32	chr2	158182180	158182277	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	2	-10.1400
chr5	135853622	135853722	protein_coding	Pom121	utr3	ENSMUSG00000053293	ProperStrand	127	chr5	74489609	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-2.4373
chr17	28465798	28465951	protein_coding	Rpl10a	exon	ENSMUSG00000037805	ProperStrand	121	chr9	120039579	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.1022
chr11	19173208	19173298	LINE	Lx9	L1	chr11Lx919172695	ProperStrand	1	chr11	18754803	18754883	lincRNA	8430419K02Rik	intron	ENSMUSG00000085743	ProperStrand	1	1	-inf
chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr12	60141396	60141509	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	6	-11.4020
chr11	115397293	115397312	protein_coding	Sumo2	intron	ENSMUSG00000020738	NonProperStrand	1	chr5	108334221	108334311	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-inf
chr5	34947433	34948498	protein_coding	Add1	exon	ENSMUSG00000029106	ProperStrand	88	chr11	97642960	97643040	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.8434
chr9	64023702	64023746	snoRNA	ENSMUSG00000064918_SNORD18	.	ENSMUSG00000064918	ProperStrand	370	chr7	118219704	118219740	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-2.1905
chr2	155513785	155513803	protein_coding	Trpc4ap	intron	ENSMUSG00000038324	NonProperStrand	4	chr16	23110828	23110874	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.6489
chr18	35073754	35091237	protein_coding	Etf1	exon	ENSMUSG00000024360	ProperStrand	74	chr16	23111389	23111469	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.9842
chr9	7932838	7932881	protein_coding	Yap1	utr3	ENSMUSG00000053110	ProperStrand	68	chr8	73419656	73419756	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.9066
chr9	44677107	44677187	protein_coding	Mll1	intron	ENSMUSG00000002028	NonProperStrand	26	chr9	44646126	44646216	protein_coding	Mll1	intron	ENSMUSG00000002028	ProperStrand	151	1	-13.1534
chr9	104111814	104111831	protein_coding	Dnajc13	intron	ENSMUSG00000032560	ProperStrand	60	chr4	131865866	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.7679
chr19	7346306	7346333	protein_coding	Rcor2	intron	ENSMUSG00000024968	ProperStrand	120	chr10	10876946	10877018	protein_coding	Shprh	exon	ENSMUSG00000090112	ProperStrand	52	1	-12.2102
chr3	88124182	88125514	protein_coding	Cct3	utr3	ENSMUSG00000001416	ProperStrand	82	chr10	23505149	23505285	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-1.7059
chr7	13516165	13516202	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr17	35088970	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-1.6670
chr13	51796955	51797013	protein_coding	Sema4d	utr3	ENSMUSG00000021451	ProperStrand	42	chr1	162967490	162967563	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	6	-20.6083
chr8	112387973	112387989	antisense	Gm17344	.	ENSMUSG00000078143	NonProperStrand	100	chr1	162968443	162968476	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-5.0814
chr4	131908236	131908315	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	chr9	15130707	15130779	snoRNA	ENSMUSG00000077506_Scarna9	.	ENSMUSG00000077506	ProperStrand	148	4	-2.4723
chr11	57969261	57969277	protein_coding	Gemin5	exon	ENSMUSG00000037275	ProperStrand	33	chr4	131908236	131908291	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.3621
chr4	139482849	139482865	lincRNA	4933427I22Rik	exon	ENSMUSG00000085928	ProperStrand	62	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-8.5273
chr2	31529107	31529157	protein_coding	Exosc2	intron	ENSMUSG00000039356	ProperStrand	39	chr6	94776848	94776877	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	1	-9.9681
chr2	69821205	69821312	protein_coding	Ubr3	exon	ENSMUSG00000044308	ProperStrand	62	chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	3	-19.4511
chr16	23110827	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	chr12	110874223	110874294	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	26	-8.0029
chr5	151755616	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr5	111121066	111121149	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-1.4071
chr11	98773528	98775237	protein_coding	Cdc6	exon	ENSMUSG00000017499	ProperStrand	27	chr3	88715214	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-8.8379
chr9	44630893	44630909	protein_coding	Mll1	exon	ENSMUSG00000002028	NonProperStrand	26	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.1929
chr11	45958060	45958106	protein_coding	Adam19	utr3	ENSMUSG00000011256	ProperStrand	134	chr6	124665329	124665429	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	1	-5.3545
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	2	-6.6798
chr4	131457062	131457468	protein_coding	Srsf4	utr3	ENSMUSG00000028911	ProperStrand	101	chr4	131908688	131908748	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-1.2945
chr6	122664450	122664550	protein_coding	Nanog	utr3	ENSMUSG00000012396	ProperStrand	66	chr6	7639333	7639356	protein_coding	Asns	exon	ENSMUSG00000029752	ProperStrand	59	1	-13.1558
chr4	116279857	116279947	protein_coding	Nasp	intron	ENSMUSG00000028693	ProperStrand	64	chr10	23505172	23505252	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.1465
chr17	6232006	6232022	protein_coding	Tulp4	exon	ENSMUSG00000034377	NonProperStrand	265	chr11	106362334	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-3.0349
chr7	94023890	94023906	LTR	RLTR1B-int	ERV1	chr7RLTR1B-int94022684	NonProperStrand	15	chr1	136495701	136495719	protein_coding	Kdm5b	utr5	ENSMUSG00000042207	ProperStrand	223	1	-13.5001
chr2	90235285	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	127813822	127813839	protein_coding	Pdzd9	utr5	ENSMUSG00000030887	ProperStrand	7	1	-8.8025
chr14	51427119	51427185	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr12	31984788	31984888	protein_coding	Lamb1	exon	ENSMUSG00000002900	ProperStrand	87	2	-10.4652
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	2	-12.5590
chr5	104255169	104257408	protein_coding	Aff1	exon	ENSMUSG00000029313	ProperStrand	82	chr4	131865902	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.3075
chr11	88702546	88702601	protein_coding	Akap1	exon	ENSMUSG00000018428	ProperStrand	45	chr11	106101408	106102875	protein_coding	Ddx42	exon	ENSMUSG00000020705	ProperStrand	26	1	-15.5721
chr9	108017616	108017633	protein_coding	Bsn	exon	ENSMUSG00000032589	ProperStrand	14	chr11	6428060	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.9988
chr4	44775970	44775988	protein_coding	Zcchc7	intron	ENSMUSG00000035649	NonProperStrand	4	chr15	79908929	79908955	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-11.1005
chr7	134341340	134341357	protein_coding	Tbc1d10b	utr3	ENSMUSG00000042492	ProperStrand	187	chr11	106362302	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-3.6671
chr2	179932439	179933006	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr5	108336381	108336471	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-1.6777
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr11	69493752	69493852	protein_coding	Senp3	utr5	ENSMUSG00000005204	ProperStrand	65	1	-7.6354
chr3	130936422	130936469	protein_coding	Hadh	utr3	ENSMUSG00000027984	ProperStrand	35	chr10	23505150	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-10.2891
chr11	6519810	6519902	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	NonProperStrand	2	chr11	6428103	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	NonProperStrand	91	1	-22.1974
chr8	38049667	38049683	LTR	MLT1A0	MaLR	chr8MLT1A038049422	NonProperStrand	91	chr14	65694470	65694518	protein_coding	Extl3	exon	ENSMUSG00000021978	ProperStrand	36	1	-13.5078
chr11	83919832	83923485	protein_coding	Tada2a	exon	ENSMUSG00000018651	ProperStrand	32	chrX	34622906	34623035	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	12	-19.6182
chr5	103854542	103891155	protein_coding	Ptpn13	utr5	ENSMUSG00000034573	NonProperStrand	74	chr1	162966189	162966208	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-7.1585
chr10	12102482	12102531	protein_coding	Utrn	utr3	ENSMUSG00000019820	ProperStrand	69	chr1	72272872	72272962	snRNA	ENSMUSG00000075752_U2	.	ENSMUSG00000075752	ProperStrand	535	1	-8.6540
chr13	38694957	38695047	protein_coding	Muted	utr3	ENSMUSG00000038982	ProperStrand	2	chrX	98479952	98480205	protein_coding	Med12	exon	ENSMUSG00000079487	ProperStrand	79	1	-inf
chr11	62416575	62416598	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr3	95980297	95980410	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	3	-7.0739
chr14	25673634	25673651	DNA	MER63D	AcHobo	chr14MER63D25673510	NonProperStrand	65	chr19	8800084	8800110	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-7.4484
chr10	90634226	90634260	protein_coding	Tmpo	utr5	ENSMUSG00000019961	ProperStrand	57	chr1	72873637	72873709	protein_coding	Igfbp2	intron	ENSMUSG00000039323	ProperStrand	406	1	-9.5870
chr19	8798744	8798813	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	chr4	41150098	41150123	snoRNA	ENSMUSG00000089265_SNORD121A	.	ENSMUSG00000089265	ProperStrand	370	1	-1.5948
chr19	46576210	46576243	protein_coding	Trim8	utr5	ENSMUSG00000025034	ProperStrand	29	chr9	107810701	107813856	protein_coding	Mst1r	exon	ENSMUSG00000032584	NonProperStrand	30	1	-16.2481
chr7	31741265	31741283	antisense	Gm17077	.	ENSMUSG00000090357	ProperStrand	3	chr10	23505152	23505233	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-6.9610
chr5	54033293	54033373	protein_coding	Rbpj	exon	ENSMUSG00000039191	ProperStrand	96	chr7	17396361	17396451	protein_coding	Fkrp	exon	ENSMUSG00000048920	ProperStrand	3	1	-18.9293
chr4	126424382	126427519	protein_coding	Ncdn	exon	ENSMUSG00000028833	ProperStrand	35	chr5	74489588	74489678	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	2	-7.9689
chr18	51449512	51449530	protein_coding	Prr16	intron	ENSMUSG00000073565	ProperStrand	16	chr9	120038554	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	3	-13.1425
chr11	75572903	75578128	protein_coding	Ywhae	exon	ENSMUSG00000020849	ProperStrand	176	chr12	60141322	60141412	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	2	-7.8170
chr1	53924798	53924815	protein_coding	Hecw2	intron	ENSMUSG00000042807	ProperStrand	39	chr3	123210883	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.7988
chr7	29107529	29108775	protein_coding	Supt5h	exon	ENSMUSG00000003435	ProperStrand	123	chr10	110918597	110918677	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-2.1923
chr11	6411590	6411607	protein_coding	Myo1g	exon	ENSMUSG00000020437	ProperStrand	18	chr3	30894707	30894746	protein_coding	Prkci	utr5	ENSMUSG00000037643	ProperStrand	39	1	-16.5649
chr9	113765872	113765907	protein_coding	Clasp2	intron	ENSMUSG00000033392	ProperStrand	30	chr15	82725599	82725636	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	1	-9.9190
chr12	73657475	73657584	protein_coding	1810048J11Rik	intron	ENSMUSG00000034501	ProperStrand	11	chr13	49779769	49779803	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-10.4612
chr14	63757205	63757305	protein_coding	Ctsb	exon	ENSMUSG00000021939	ProperStrand	48	chr2	16278620	16278637	protein_coding	Plxdc2	utr5	ENSMUSG00000026748	NonProperStrand	44	1	-14.3894
chr7	3631299	3631351	protein_coding	Mboat7	intron	ENSMUSG00000035596	ProperStrand	2	chr8	38752638	38752655	protein_coding	Sgcz	intron	ENSMUSG00000039539	ProperStrand	46	1	-inf
chr16	3856862	3856879	protein_coding	Zfp174	utr3	ENSMUSG00000054939	NonProperStrand	166	chr4	131866156	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	4	-7.3029
chr5	36813976	36814037	protein_coding	Grpel1	exon	ENSMUSG00000029198	ProperStrand	20	chr7	106631404	106631439	snoRNA	ENSMUSG00000065822_Snord15a	.	ENSMUSG00000065822	ProperStrand	128	1	-14.0239
chr15	25736446	25736463	protein_coding	Myo10	intron	ENSMUSG00000022272	NonProperStrand	8	chr1	88253981	88254012	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	1	-11.4822
chr5	24309482	24309548	protein_coding	Rheb	exon	ENSMUSG00000028945	ProperStrand	8	chr11	80415108	80415125	protein_coding	Myo1d	exon	ENSMUSG00000035441	ProperStrand	144	1	-15.6789
chr7	20147533	20147551	protein_coding	Ppp1r37	utr5	ENSMUSG00000051403	ProperStrand	34	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.7115
chr15	88564528	88564553	protein_coding	Brd1	utr5	ENSMUSG00000022387	ProperStrand	70	chr11	5180669	5180685	protein_coding	Znrf3	utr3	ENSMUSG00000041961	NonProperStrand	210	1	-10.4909
chr11	98867397	98868285	protein_coding	Top2a	exon	ENSMUSG00000020914	ProperStrand	324	chr11	97642964	97643054	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	NonProperStrand	10	1	-13.6003
chr8	74144545	74144705	protein_coding	Glt25d1	exon	ENSMUSG00000034807	ProperStrand	36	chr11	69483171	69483251	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.3562
chr15	76371908	76371925	protein_coding	Slc52a2	utr3	ENSMUSG00000022560	NonProperStrand	25	chr1	71625520	71625575	protein_coding	Atic	utr3	ENSMUSG00000026192	ProperStrand	30	1	-16.5621
chr3	94894546	94894626	snoRNA	ENSMUSG00000064952_SNORD62	.	ENSMUSG00000064952	ProperStrand	75	chr2	26494708	26494798	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.7116
chr10	42254881	42254964	protein_coding	Snx3	utr3	ENSMUSG00000019804	ProperStrand	19	chr1	89681332	89681395	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	3	-17.6835
chr11	30671840	30671878	protein_coding	Psme4	utr5	ENSMUSG00000040850	ProperStrand	40	chr11	69481335	69481433	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.9506
chr9	20715881	20715898	protein_coding	Dnmt1	exon	ENSMUSG00000004099	NonProperStrand	12	chr11	3426352	3426368	protein_coding	Smtn	exon	ENSMUSG00000020439	ProperStrand	222	1	-13.9692
chr10	95725529	95725545	DNA	URR1A	MER1_type	chr10URR1A95725393	ProperStrand	4	chr7	117166721	117166780	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-10.4200
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr7	51505507	51505591	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	2	-8.0755
chr2	180396931	180396995	protein_coding	Dido1	exon	ENSMUSG00000038914	ProperStrand	81	chr11	77995190	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	3	-12.9838
chr13	76341035	76341055	protein_coding	Fam81b	intron	ENSMUSG00000078966	NonProperStrand	220	chr4	116827858	116827891	snoRNA	ENSMUSG00000064751_SNORD46	.	ENSMUSG00000064751	ProperStrand	132	1	-9.1271
chr4	131826033	131826126	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	chr11	62418058	62418089	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	5	-9.3008
chr8	87366931	87368045	protein_coding	Calr	exon	ENSMUSG00000003814	ProperStrand	232	chr11	97642952	97643016	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	7	-7.3224
chr14	30853922	30853938	protein_coding	Cacna1d	utr3	ENSMUSG00000015968	NonProperStrand	12	chr11	34633331	34633383	protein_coding	Ccdc99	exon	ENSMUSG00000069910	ProperStrand	8	1	-19.1875
chr11	87913128	87913145	processed_transcript	2210416O15Rik	.	ENSMUSG00000087498	ProperStrand	76	chr13	58503764	58503818	protein_coding	Hnrnpk	utr5	ENSMUSG00000021546	ProperStrand	117	1	-11.4964
chr6	69657216	69657233	LTR	IAPEz-int	ERVK	chr6IAPEz-int69657165	NonProperStrand	42	chr9	15119632	15119693	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.2646
chr16	18936706	18936746	protein_coding	Hira	intron	ENSMUSG00000022702	ProperStrand	28	chr10	39978393	39978484	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	6	-19.2313
chr4	43505720	43505810	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr11	45958668	45958692	protein_coding	Adam19	utr3	ENSMUSG00000011256	ProperStrand	134	5	-8.9230
chr8	86451835	86452164	protein_coding	Lphn1	intron	ENSMUSG00000013033	ProperStrand	221	chrX	11635848	11635865	protein_coding	Bcor	exon	ENSMUSG00000040363	NonProperStrand	293	2	-12.0527
chr2	30479348	30479364	LINE	L1M5	L1	chr2L1M530479194	ProperStrand	10	chr2	57090809	57090827	protein_coding	Gpd2	utr5	ENSMUSG00000026827	ProperStrand	93	1	-16.0856
chr16	30569440	30569471	protein_coding	Lsg1	exon	ENSMUSG00000022538	ProperStrand	25	chr11	69483136	69483199	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.0393
chr4	126703248	126703425	protein_coding	Sfpq	exon	ENSMUSG00000028820	ProperStrand	340	chr3	152450537	152450558	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	3	-12.5087
chr17	88039711	88045497	protein_coding	Epcam	exon	ENSMUSG00000045394	ProperStrand	43	chr1	162965990	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	3	-10.2477
chr1	191475047	191475128	protein_coding	Cenpf	exon	ENSMUSG00000026605	ProperStrand	44	chr3	129571414	129571430	protein_coding	Cfi	exon	ENSMUSG00000058952	ProperStrand	4	1	-inf
chr5	143731603	143731655	protein_coding	Fscn1	exon	ENSMUSG00000029581	ProperStrand	200	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-1.5625
chr11	12265122	12269616	protein_coding	Cobl	exon	ENSMUSG00000020173	ProperStrand	133	chr16	44215865	44215955	protein_coding	Gm608	exon	ENSMUSG00000068284	ProperStrand	17	2	-19.9261
chr4	79649690	79649739	pseudogene	Gm11408	.	ENSMUSG00000083076	ProperStrand	11	chr5	121655134	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-7.0917
chr8	3634493	3634583	protein_coding	Stxbp2	exon	ENSMUSG00000004626	ProperStrand	19	chr3	30924669	30924749	protein_coding	Prkci	intron	ENSMUSG00000037643	ProperStrand	39	1	-16.4396
chrX	67458741	67458757	LINE	Lx8	L1	chrXLx867458264	NonProperStrand	35	chr9	120037933	120037974	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-5.7569
chr9	61762241	61762299	protein_coding	Rplp1	utr5	ENSMUSG00000007892	ProperStrand	116	chr6	124861370	124861386	protein_coding	Lag3	utr5	ENSMUSG00000030124	ProperStrand	9	1	-15.8838
chr4	131908363	131908472	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr8	23178445	23178461	protein_coding	Alg11	exon	ENSMUSG00000063362	ProperStrand	5	1	-12.4117
chr8	94528679	94528698	LTR	RLTR20B3	ERVK	chr8RLTR20B394528403	ProperStrand	12	chr7	106627969	106628420	protein_coding	Rps3	exon	ENSMUSG00000030744	ProperStrand	159	2	-inf
chr15	57707095	57707121	protein_coding	Derl1	exon	ENSMUSG00000022365	ProperStrand	7	chr5	130300493	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-11.0020
chr7	29858743	29858759	lincRNA	Gm16799	intron	ENSMUSG00000087096	ProperStrand	2	chr7	29136525	29136627	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-9.5181
chr2	29035567	29035635	protein_coding	Setx	exon	ENSMUSG00000043535	ProperStrand	187	chr4	131866155	131866245	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	3	-4.8540
chr18	34768135	34768186	protein_coding	Brd8	exon	ENSMUSG00000003778	ProperStrand	27	chr2	4974190	4974207	protein_coding	Optn	exon	ENSMUSG00000026672	ProperStrand	451	1	-10.8874
chr7	54109369	54109424	protein_coding	Ldha	exon	ENSMUSG00000063229	ProperStrand	280	chr19	8799833	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	4	-7.9891
chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	chr11	74718931	74718978	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	1	-5.2519
chr1	183849570	183853855	protein_coding	Enah	exon	ENSMUSG00000022995	ProperStrand	196	chr4	131908689	131908891	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	7	-3.6244
chr13	97955547	97958924	protein_coding	Hexb	exon	ENSMUSG00000021665	ProperStrand	22	chr9	64022796	64023084	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	2	-16.8878
chr18	12295524	12307419	protein_coding	Riok3	exon	ENSMUSG00000024404	ProperStrand	38	chr11	97642952	97643047	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	12	-inf
mmu-miR-6240	9	26	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr11	77639241	77639258	protein_coding	Myo18a	intron	ENSMUSG00000000631	ProperStrand	124	1	-4.4968
chr4	126241209	126241226	protein_coding	Clspn	exon	ENSMUSG00000042489	ProperStrand	89	chr4	131865917	131865977	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.1955
chr9	67741776	67741811	protein_coding	Vps13c	utr3	ENSMUSG00000035284	ProperStrand	69	chr1	54870214	54870231	protein_coding	Ankrd44	intron	ENSMUSG00000052331	ProperStrand	27	1	-14.6453
chr5	14252800	14252816	protein_coding	Sema3e	utr3	ENSMUSG00000063531	ProperStrand	125	chr15	82980189	82980225	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-5.6918
chr11	48615526	48615552	protein_coding-noncoding	Gnb2l1	utr5	ENSMUSG00000020372	ProperStrand	21	chr12	85334286	85334326	protein_coding	Acot2	utr3	ENSMUSG00000021226	ProperStrand	5	1	-19.3637
chr15	103333532	103333549	protein_coding	Pde1b	utr5	ENSMUSG00000022489	ProperStrand	19	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.4761
chr10	47475356	47475436	LTR	RLTR6_Mm	ERV1	chr10RLTR6_Mm47475345	NonProperStrand	1	chr2	177638104	177638194	protein_coding	C330013J21Rik	utr3	ENSMUSG00000074529	ProperStrand	2	1	-inf
chr6	142439080	142439096	protein_coding	Ldhb	exon	ENSMUSG00000030246	NonProperStrand	63	chr18	73693168	73693187	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	2	-8.8953
chr18	31881943	31881962	protein_coding	Sap130	exon	ENSMUSG00000024260	NonProperStrand	3	chr4	131908809	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-12.0505
chrX	147642264	147642312	pseudogene	Wnk3-ps	.	ENSMUSG00000041245	ProperStrand	21	chr11	116938728	116938750	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-8.2619
chr10	80255179	80255269	protein_coding	Dot1l	exon	ENSMUSG00000061589	ProperStrand	48	chr16	23111374	23111454	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-2.9535
chr17	35152005	35152360	protein_coding	Vars	exon	ENSMUSG00000007029	ProperStrand	121	chr7	13516170	13516196	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	1	-7.2677
chr17	45708044	45708093	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr5	108334195	108334240	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	4	-1.2092
chr11	97738770	97738788	protein_coding	Fbxo47	intron	ENSMUSG00000070336	ProperStrand	7	chr15	79908960	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-9.8509
chr4	131908356	131908464	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr16	3847573	3847589	protein_coding	Zfp174	utr5	ENSMUSG00000054939	NonProperStrand	166	1	-5.2582
chr2	179960492	179960509	protein_coding	Lama5	utr5	ENSMUSG00000015647	ProperStrand	365	chr1	87983941	87983998	snoRNA	ENSMUSG00000077274_SNORA26	.	ENSMUSG00000077274	ProperStrand	361	1	-6.1305
chr8	77633989	77634087	protein_coding	Mcm5	exon	ENSMUSG00000005410	ProperStrand	199	chr3	152450608	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	3	-14.6171
chr19	42225881	42225897	protein_coding	Marveld1	utr3	ENSMUSG00000044345	NonProperStrand	112	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-4.0066
chr7	6660864	6660951	protein_coding	Peg3	exon	ENSMUSG00000002265	ProperStrand	8	chr11	69483156	69483246	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-15.0039
chr1	172993122	172993139	protein_coding	Fcgr3	intron	ENSMUSG00000059498	ProperStrand	44	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-6.4550
chr7	34993792	34993865	protein_coding-noncoding	Gpi1	utr3	ENSMUSG00000036427	ProperStrand	19	chr4	131908689	131908739	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.0948
chr5	121655015	121655154	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	chr17	24857716	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	74	-1.4746
chr15	99252618	99252667	protein_coding	Nckap5l	utr3	ENSMUSG00000023009	ProperStrand	51	chr8	94860055	94860071	protein_coding	4933436C20Rik	intron	ENSMUSG00000031736	ProperStrand	3	1	-inf
chr9	57681749	57681849	protein_coding	Arid3b	exon	ENSMUSG00000004661	ProperStrand	39	chr16	24984504	24984520	protein_coding	Lpp	utr3	ENSMUSG00000033306	NonProperStrand	189	1	-11.8806
chrX	50622207	50622294	protein_coding	Fam122b	utr5	ENSMUSG00000036022	ProperStrand	20	chr2	63936035	63936053	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-10.0801
chr11	53405370	53405388	protein_coding	Kif3a	intron	ENSMUSG00000018395	ProperStrand	23	chr11	69483136	69483232	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.1990
chr9	64034033	64034123	protein_coding	Map2k1	utr3	ENSMUSG00000004936	ProperStrand	36	chr8	49314126	49314206	protein_coding	Odz3	exon	ENSMUSG00000031561	ProperStrand	56	1	-14.4836
chr10	79756770	79756807	protein_coding	Rps15	exon	ENSMUSG00000063457	ProperStrand	119	chr19	43269721	43269737	protein_coding	Hpse2	intron	ENSMUSG00000074852	NonProperStrand	48	1	-12.3878
chr11	30038424	30038478	protein_coding	Spnb2	exon	ENSMUSG00000020315	ProperStrand	103	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	2	-6.9666
chr18	89893757	89893774	protein_coding	Dok6	intron	ENSMUSG00000073514	NonProperStrand	3	chr16	23111448	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-6.9982
chr18	6027644	6027666	protein_coding	Arhgap12	exon	ENSMUSG00000041225	ProperStrand	25	chr11	6428076	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.8448
chr3	146256634	146256724	protein_coding	Dnase2b	intron	ENSMUSG00000028185	ProperStrand	14	chr3	146528579	146528669	protein_coding	Ttll7	intron	ENSMUSG00000036745	NonProperStrand	16	1	-19.1867
chr8	13416897	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr1	88248623	88248662	snoRNA	ENSMUSG00000064696_SNORD20	.	ENSMUSG00000064696	ProperStrand	89	1	-5.6786
chr8	122333153	122333195	protein_coding	Cotl1	utr3	ENSMUSG00000031827	ProperStrand	11	chr4	131866155	131866245	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-7.0035
mmu-miR-3968	3	21	miRNA	mmu-miR-3968	.	mmu-miR-3968	ProperStrand	27	chr15	37934868	37934968	protein_coding	Ubr5	intron	ENSMUSG00000037487	ProperStrand	258	1	-12.0048
chr3	68841750	68841840	protein_coding	Trim59	exon	ENSMUSG00000034317	ProperStrand	22	chr5	121871305	121871372	protein_coding	Naa25	exon	ENSMUSG00000042719	ProperStrand	95	1	-14.4272
chr11	97042985	97043012	protein_coding	Kpnb1	exon	ENSMUSG00000001440	ProperStrand	197	chr2	30751605	30751623	protein_coding	Ptges	intron	ENSMUSG00000050737	NonProperStrand	10	1	-14.5988
chr13	98266824	98266863	lincRNA	Gm11019	exon	ENSMUSG00000078952	ProperStrand	113	chr9	120038613	120038657	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-3.5527
chr14	35635748	35635765	protein_coding	Grid1	exon	ENSMUSG00000041078	ProperStrand	12	chr14	33005138	33005188	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-7.1733
chr6	86475921	86475985	protein_coding	Pcbp1	utr5	ENSMUSG00000051695	ProperStrand	108	chr17	39985654	39985753	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-4.7888
chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr8	24168974	24168990	protein_coding	Ank1	utr5	ENSMUSG00000031543	ProperStrand	47	1	-6.9390
chr19	3904233	3904250	protein_coding	Tcirg1	exon	ENSMUSG00000001750	ProperStrand	77	chr9	120037932	120038026	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-4.2296
chr7	111380576	111380893	protein_coding	Trim6	intron	ENSMUSG00000072244	ProperStrand	40	chr18	35716764	35716844	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.8651
chr7	46508671	46508761	LINE	L1_Mur2	L1	chr7L1_Mur246508645	NonProperStrand	1	chr7	46508897	46508987	LINE	L1_Mur2	L1	chr7L1_Mur246508895	NonProperStrand	1	1	-inf
chr8	13416895	13416912	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr7	106535125	106535143	protein_coding	Gdpd5	intron	ENSMUSG00000035314	NonProperStrand	14	1	-9.3927
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr16	4320047	4320065	protein_coding	Adcy9	intron	ENSMUSG00000005580	ProperStrand	25	1	-7.6490
chr2	11688848	11688901	protein_coding	Fbxo18	exon	ENSMUSG00000058594	ProperStrand	6	chr18	35716851	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-6.6008
chr17	24665467	24665488	protein_coding	Rab26	intron	ENSMUSG00000079657	ProperStrand	11	chr16	23110886	23110986	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	NonProperStrand	93	1	-15.8614
chr13	73463407	73463423	protein_coding	Ndufs6	intron	ENSMUSG00000021606	NonProperStrand	52	chr11	106362638	106362692	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	2	-12.3095
chr11	104393164	104396126	protein_coding	Cdc27	exon	ENSMUSG00000020687	NonProperStrand	5	chr16	23110879	23110971	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	NonProperStrand	93	2	-19.6251
chr3	53168407	53168487	LTR	MuRRS-int	ERV1	chr3MuRRS-int53168080	ProperStrand	1	chr5	100668812	100668902	pseudogene	Gm8091	.	ENSMUSG00000085915	ProperStrand	5	1	-inf
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr4	118966984	118967101	protein_coding	Ybx1	utr5	ENSMUSG00000028639	ProperStrand	171	3	-15.4094
chr15	97215966	97215987	protein_coding	Fam113b	utr3	ENSMUSG00000044250	ProperStrand	10	chr16	23111777	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.2069
chr13	22098354	22098371	protein_coding	Prss16	intron	ENSMUSG00000006179	ProperStrand	78	chr11	77996587	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-5.5772
mmu-miR-2137	0	19	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-6.4408
chr1	138178661	138178677	protein_coding	Camsap2	exon	ENSMUSG00000041570	NonProperStrand	116	chr5	108336376	108336409	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-3.6337
chr3	32479617	32479634	protein_coding	Gnb4	utr3	ENSMUSG00000027669	ProperStrand	10	chr4	131865855	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.0395
chr11	62416575	62416614	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr9	15118244	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	4	-2.3401
chr17	27768020	27768120	protein_coding-noncoding	Rps10	utr3	ENSMUSG00000052146	ProperStrand	3	chr7	116663689	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-8.5982
chr15	82980135	82980189	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr12	92811869	92811915	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	1	-2.6412
chr1	89293595	89303769	protein_coding	Gigyf2	intron	ENSMUSG00000048000	ProperStrand	128	chr10	90581055	90581194	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	29	-inf
chr13	97428983	97429063	protein_coding	Hmgcr	exon	ENSMUSG00000021670	ProperStrand	56	chr11	69483139	69483229	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.5680
chr2	118997714	118997732	protein_coding	Gchfr	exon	ENSMUSG00000046814	ProperStrand	6	chrX	132424059	132424157	protein_coding	Bhlhb9	exon	ENSMUSG00000072964	ProperStrand	11	1	-18.8087
chr8	87864831	87864852	protein_coding	Mylk3	intron	ENSMUSG00000031698	NonProperStrand	2	chr14	33005095	33005138	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	2	-inf
chr11	63885336	63887052	protein_coding	Cox10	exon	ENSMUSG00000042148	NonProperStrand	187	chr1	88252853	88252899	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-4.4285
chr11	45953543	45953643	protein_coding	Adam19	exon	ENSMUSG00000011256	ProperStrand	134	chr15	8181184	8181200	protein_coding	2410089E03Rik	exon	ENSMUSG00000039801	ProperStrand	43	1	-12.3731
chr11	51414349	51414377	protein_coding	Hnrnpab	utr3	ENSMUSG00000020358	ProperStrand	124	chr6	122269540	122270023	protein_coding	Phc1	exon	ENSMUSG00000040669	ProperStrand	158	3	-20.2006
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-3.2060
chr2	60208719	60208737	antisense	Gm13571	.	ENSMUSG00000086196	ProperStrand	4	chr8	13876127	13876227	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	4	-inf
chr3	96979555	96979572	protein_coding	Acp6	exon	ENSMUSG00000028093	ProperStrand	19	chr9	66870981	66871059	protein_coding	Tpm1	utr3	ENSMUSG00000032366	ProperStrand	23	1	-17.4393
chr2	84886581	84886804	protein_coding	Ssrp1	exon	ENSMUSG00000027067	ProperStrand	118	chr7	52382014	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-5.3833
chr15	73584203	73587530	protein_coding	Ptp4a3	utr3	ENSMUSG00000059895	ProperStrand	45	chr10	23505154	23505237	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-3.0673
chr9	120039533	120039665	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	chr11	116938557	116938711	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	13	-1.5992
chr14	58861927	58862017	Simple_repeat	(TC)n	Simple_repeat	chr14(TC)n58861910	ProperStrand	1	chr13	20439882	20439962	protein_coding	Elmo1	intron	ENSMUSG00000041112	NonProperStrand	34	1	-inf
chr12	17552979	17553069	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr14	76372336	76372416	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	1	-1.3208
chr17	24199898	24199978	protein_coding	Kctd5	intron	ENSMUSG00000016946	ProperStrand	17	chr4	134481277	134481711	protein_coding	D4Wsu53e	exon	ENSMUSG00000037266	ProperStrand	15	3	-inf
chr9	57217029	57217046	LINE	Lx4A	L1	chr9Lx4A57216705	ProperStrand	16	chr2	26493391	26493466	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-10.3157
chr12	111856814	111856836	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chrX	152009278	152009294	protein_coding	Ptchd1	exon	ENSMUSG00000041552	NonProperStrand	294	1	-5.4124
chr9	78023108	78023245	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	17	-2.3226
chr17	36097663	36097764	protein_coding	Abcf1	exon	ENSMUSG00000038762	ProperStrand	206	chr4	126210585	126210604	protein_coding	Eif2c4	utr5	ENSMUSG00000042500	ProperStrand	2	1	-19.0854
chr10	126622346	126622654	protein_coding	Arhgef25	exon	ENSMUSG00000019467	ProperStrand	12	chr1	63225578	63225658	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	2	-15.7691
chr4	42995839	42995878	protein_coding	Vcp	exon	ENSMUSG00000028452	ProperStrand	108	chr11	106362339	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-4.7010
chr11	74479448	74479466	protein_coding	1300001I01Rik	exon	ENSMUSG00000020741	NonProperStrand	2	chr16	23111394	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-8.0851
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr6	119987423	119987498	protein_coding	Wnk1	exon	ENSMUSG00000045962	ProperStrand	221	1	-5.4019
chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	chr9	120038466	120038663	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	4	-2.5597
chr3	55987230	55987247	protein_coding	Nbea	utr5	ENSMUSG00000027799	NonProperStrand	115	chr8	39436369	39436386	protein_coding	Sgcz	intron	ENSMUSG00000039539	ProperStrand	46	1	-12.5430
chr4	79007630	79007647	LINE	Lx6	L1	chr4Lx679007232	NonProperStrand	1	chr9	15118246	15118325	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-inf
chr4	137772948	137772970	protein_coding	Hp1bp3	intron	ENSMUSG00000028759	ProperStrand	21	chr18	35716697	35716787	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-6.8619
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr11	4925606	4925706	protein_coding	Ap1b1	exon	ENSMUSG00000009090	ProperStrand	43	1	-6.5623
chr6	131263022	131263039	protein_coding	Styk1	utr5	ENSMUSG00000032899	NonProperStrand	4	chr4	131865866	131865989	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.0048
chr3	104584126	104584212	protein_coding	Ppm1j	exon	ENSMUSG00000002228	ProperStrand	2	chr15	34370545	34370610	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-inf
chr15	83770046	83770063	protein_coding	Efcab6	intron	ENSMUSG00000022441	ProperStrand	60	chr9	120039533	120039567	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.3187
chr4	133552802	133552831	protein_coding	Dhdds	exon	ENSMUSG00000012117	ProperStrand	11	chr16	23110828	23110873	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.6241
chr5	117643843	117649012	protein_coding	Taok3	exon	ENSMUSG00000061288	ProperStrand	28	chr9	100978667	100978695	protein_coding	Msl2	utr5	ENSMUSG00000066415	ProperStrand	9	1	-18.5572
chr2	3408151	3408225	protein_coding	Hspa14	intron	ENSMUSG00000051396	ProperStrand	23	chr16	23111448	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.7951
chr5	135096604	135096728	protein_coding	Eif4h	utr3	ENSMUSG00000040731	ProperStrand	46	chr1	54870214	54870231	protein_coding	Ankrd44	intron	ENSMUSG00000052331	ProperStrand	27	1	-15.4640
chr18	31490479	31490496	LINE	Lx3_Mus	L1	chr18Lx3_Mus31490416	ProperStrand	9	chr9	56985855	56986213	protein_coding	Man2c1	exon	ENSMUSG00000032295	ProperStrand	13	1	-19.2772
chr17	39390817	39390833	LTR	MMERVK10C-int	ERVK	chr17MMERVK10C-int39390398	NonProperStrand	11	chr8	113177203	113177227	protein_coding	Vac14	exon	ENSMUSG00000010936	ProperStrand	27	1	-18.1357
chr3	37750806	37750824	LINE	L1_Mus3	L1	chr3L1_Mus337750762	ProperStrand	38	chr16	23111775	23111801	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.6668
chr1	94831533	94834539	protein_coding	Capn10	exon	ENSMUSG00000026270	ProperStrand	32	chr2	103880945	103880964	snoRNA	ENSMUSG00000087739_SCARNA21	.	ENSMUSG00000087739	ProperStrand	50	1	-14.9436
chr16	3902069	3902104	protein_coding	Nat15	utr5	ENSMUSG00000005982	ProperStrand	8	chr2	26494708	26494793	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-7.0621
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr4	44139834	44139850	protein_coding	Rnf38	utr3	ENSMUSG00000035696	ProperStrand	66	1	-5.7165
chr19	32464273	32464289	lincRNA	2700046G09Rik	exon	ENSMUSG00000024893	ProperStrand	59	chr6	115758072	115758120	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-5.5048
chr14	37943863	37943892	protein_coding	Ghitm	exon	ENSMUSG00000041028	ProperStrand	26	chr3	123210878	123210972	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-6.0485
chr6	106728094	106728870	protein_coding	Trnt1	exon	ENSMUSG00000013736	ProperStrand	4	chr1	162965559	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-8.7752
chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	chr5	117825784	117825833	protein_coding	Wsb2	exon	ENSMUSG00000029364	ProperStrand	15	1	-12.5772
chr6	84536995	84537012	protein_coding	Cyp26b1	intron	ENSMUSG00000063415	ProperStrand	27	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-8.8066
chr10	90579962	90580002	protein_coding	Slc25a3	exon	ENSMUSG00000061904	ProperStrand	74	chr16	32243842	32243941	snoRNA	ENSMUSG00000080440_SNORA79	.	ENSMUSG00000080440	ProperStrand	140	1	-11.1906
chr18	50440261	50440277	protein_coding	Fam170a	exon	ENSMUSG00000035420	NonProperStrand	5	chr9	15119631	15119676	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-7.5411
chr1	63161264	63161281	lincRNA	Gm11602	intron	ENSMUSG00000084799	ProperStrand	22	chr7	117189933	117189982	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-5.2455
chr2	120165137	120165227	protein_coding	Vps39	exon	ENSMUSG00000027291	ProperStrand	24	chr16	23110482	23110562	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.1305
chr12	111888079	111899642	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr18	35716727	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	7	-1.2366
chr19	7502333	7502350	protein_coding	Rtn3	exon	ENSMUSG00000024758	NonProperStrand	30	chrX	84483698	84483720	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-9.6447
chr18	14432821	14432838	DNA	URR1B	MER1_type	chr18URR1B14432815	ProperStrand	4	chr19	8798484	8798513	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-10.8309
chr2	90235298	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr14	21187449	21187466	protein_coding	Fam149b	intron	ENSMUSG00000039599	ProperStrand	6	1	-9.1372
chr1	71695837	71697151	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr16	23109044	23109093	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	2	-3.8236
chr3	68350845	68350877	protein_coding	Schip1	intron	ENSMUSG00000027777	ProperStrand	70	chr11	69481332	69481430	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	5	-13.0299
chr1	173104380	173104397	protein_coding	Pcp4l1	utr3	ENSMUSG00000038370	ProperStrand	1	chr16	19883898	19883915	protein_coding	A930003A15Rik	exon	ENSMUSG00000075330	ProperStrand	93	1	-inf
chr6	54379743	54379760	lincRNA	9130019P16Rik	exon	ENSMUSG00000073067	ProperStrand	255	chr5	108336377	108336457	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-2.2469
chr4	43505656	43505847	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr19	37461891	37464868	protein_coding	Kif11	exon	ENSMUSG00000012443	ProperStrand	29	2	-7.4041
chr8	81675205	81675239	protein_coding	Zfp827	intron	ENSMUSG00000071064	ProperStrand	78	chr10	23505149	23505258	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-4.3315
chr9	110290691	110290713	protein_coding	Ptpn23	exon	ENSMUSG00000036057	NonProperStrand	6	chr19	8799021	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-10.5557
chr12	8757648	8757668	protein_coding	Pum2	utr3	ENSMUSG00000020594	ProperStrand	39	chr9	108734083	108734099	protein_coding	Celsr3	exon	ENSMUSG00000023473	NonProperStrand	5	1	-18.2354
chr11	68635237	68635309	protein_coding	Ndel1	utr3	ENSMUSG00000018736	ProperStrand	30	chr4	57868245	57868262	protein_coding	Gm20459	exon	ENSMUSG00000089945	NonProperStrand	34	1	-15.8628
chr11	102294588	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr12	112779177	112779223	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-1.0392
chr13	4273003	4273020	protein_coding	Akr1c12	exon	ENSMUSG00000021211	NonProperStrand	3	chr1	88247815	88247834	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-11.4044
chr1	64779421	64779511	protein_coding	Fzd5	utr3	ENSMUSG00000045005	ProperStrand	175	chr11	97642984	97643090	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	11	-17.3509
chr1	84692463	84692481	miRNA	Mir5126	.	ENSMUSG00000093254	ProperStrand	15	chr5	15510862	15510878	protein_coding	Cacna2d1	intron	ENSMUSG00000040118	NonProperStrand	13	1	-19.6048
chr11	64286351	64286369	protein_coding	Hs3st3a1	intron	ENSMUSG00000047759	NonProperStrand	12	chr1	162965530	162965578	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-6.4045
chr15	38226457	38226557	protein_coding	Klf10	exon	ENSMUSG00000037465	ProperStrand	33	chr16	96391554	96391613	protein_coding	Lca5l	intron	ENSMUSG00000045275	NonProperStrand	210	1	-12.0081
chr1	179712994	179714196	protein_coding	Adss	exon	ENSMUSG00000015961	ProperStrand	23	chr16	23109032	23109090	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	2	-14.6296
chr2	84546289	84546309	protein_coding	Zdhhc5	intron	ENSMUSG00000034075	ProperStrand	20	chr9	120039623	120039658	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-5.4196
chr5	144765873	144765973	protein_coding	Ccz1	intron	ENSMUSG00000029617	ProperStrand	10	chr10	23505151	23505214	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.3364
chr19	5797060	5797107	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr5	115940328	115940407	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	10	-inf
chr1	162966189	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	chr17	24856646	24856736	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-1.2864
chr10	22031893	22031910	LTR	ORR1D2	MaLR	chr10ORR1D222031778	NonProperStrand	1	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-inf
chr9	15119646	15119713	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	chr1	162967115	162967178	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	4	-0.7741
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr1	152268927	152269668	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	2	-7.3109
chr7	148442463	148442553	protein_coding	Phrf1	exon	ENSMUSG00000038611	ProperStrand	86	chr2	26493405	26493485	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-3.0843
chr1	135550692	135554426	protein_coding	Zc3h11a	intron	ENSMUSG00000026464	ProperStrand	102	chr19	8963023	8963083	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	4	-6.0146
chrX	83437758	83437889	protein_coding	Nr0b1	exon	ENSMUSG00000025056	ProperStrand	37	chr8	73419657	73419684	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.0248
chr3	108189447	108189514	protein_coding	Psrc1	exon	ENSMUSG00000068744	ProperStrand	38	chr18	35716822	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.9566
chr19	43579408	43579425	protein_coding	Got1	intron	ENSMUSG00000025190	NonProperStrand	147	chr11	97643008	97643061	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.1040
chr17	85484132	85484162	protein_coding	Prepl	intron	ENSMUSG00000024127	ProperStrand	106	chr3	123210919	123210972	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.2138
chr13	13603296	13603312	protein_coding	Nid1	utr3	ENSMUSG00000005397	ProperStrand	112	chr17	24857728	24857789	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.3308
chr11	69481362	69481433	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	chr18	35100889	35100955	snoRNA	ENSMUSG00000089239_SNORD63	.	ENSMUSG00000089239	ProperStrand	18	3	-12.9847
chr2	90235312	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	58193155	58193173	protein_coding	Atrnl1	intron	ENSMUSG00000054843	ProperStrand	22	1	-6.4314
chr3	32240017	32240089	protein_coding	Zmat3	utr3	ENSMUSG00000027663	ProperStrand	62	chr9	120038030	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-4.6428
chr5	115574636	115574668	protein_coding	Unc119b	utr3	ENSMUSG00000046562	ProperStrand	20	chr5	130300470	130300546	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-7.5950
chr9	121621724	121621741	protein_coding	Deb1	exon	ENSMUSG00000032526	NonProperStrand	1	chr16	23110873	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr2	131743772	131743834	protein_coding-noncoding	Prnp	utr5	ENSMUSG00000079037	ProperStrand	2	chr9	21599619	21599719	protein_coding	Kank2	exon	ENSMUSG00000032194	ProperStrand	196	1	-19.1301
chr3	96363981	96364143	protein_coding	Txnip	exon	ENSMUSG00000038393	ProperStrand	172	chr7	116663700	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	10	-15.6681
chr5	140915916	140916000	protein_coding	Eif3b	exon	ENSMUSG00000056076	ProperStrand	66	chr10	107800729	107800792	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	3	-17.5498
chr4	154794368	154794384	protein_coding	2010015L04Rik	utr5	ENSMUSG00000042233	ProperStrand	5	chr11	62416991	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-11.1760
chr1	58016051	58016143	protein_coding	Kctd18	utr3	ENSMUSG00000054770	ProperStrand	7	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.4785
chr11	6239207	6239869	protein_coding	Ogdh	exon	ENSMUSG00000020456	ProperStrand	42	chr10	23505157	23505247	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.7547
chr2	26336517	26336617	protein_coding	Notch1	exon	ENSMUSG00000026923	ProperStrand	145	chr4	131908236	131908295	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-1.6410
chr8	48972477	48972495	protein_coding	Wwc2	exon	ENSMUSG00000031563	NonProperStrand	56	chr5	115939516	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	10	-19.2950
chr7	51503524	51503548	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	chr18	52854064	52854081	protein_coding	Gykl1	exon	ENSMUSG00000053624	ProperStrand	18	1	-11.0544
chr14	119053445	119053512	protein_coding	Abcc4	exon	ENSMUSG00000032849	ProperStrand	137	chr13	49779721	49779801	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	4	-16.4819
chr7	133520549	133520566	protein_coding	Spns1	exon	ENSMUSG00000030741	NonProperStrand	16	chr10	24940547	24959484	protein_coding	Akap7	exon	ENSMUSG00000039166	ProperStrand	11	1	-18.9924
chr11	68886928	68887035	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	chr2	32818814	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	72	-inf
chr19	60603551	60603594	protein_coding	2700078E11Rik	utr3	ENSMUSG00000033417	ProperStrand	12	chr16	23110828	23110867	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-6.8317
chr10	82878278	82878368	LTR	IAPLTR2_Mm	ERVK	chr10IAPLTR2_Mm82877994	ProperStrand	1	chr14	50010336	50010416	protein_coding	Slc35f4	intron	ENSMUSG00000021852	NonProperStrand	4	1	-inf
chr13	26850316	26850396	LINE	L1Md_F2	L1	chr13L1Md_F226849518	ProperStrand	1	chr7	54443905	54443995	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-inf
chr2	90235296	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	57706987	57707003	protein_coding	Palm2	intron	ENSMUSG00000090053	NonProperStrand	187	2	-4.2384
chr2	72123795	72123812	protein_coding	B230120H23Rik	utr5	ENSMUSG00000004085	ProperStrand	34	chr2	172859967	172860001	protein_coding	Rbm38	utr3	ENSMUSG00000027510	ProperStrand	33	1	-15.6380
chr17	25020758	25020780	protein_coding	Nubp2	exon	ENSMUSG00000039183	ProperStrand	8	chr16	23110531	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-6.3329
chr1	168131703	168131723	protein_coding	Mael	exon	ENSMUSG00000040629	ProperStrand	4	chr2	32818804	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-11.0985
chr10	116488319	116491172	protein_coding	Cct2	exon	ENSMUSG00000034024	ProperStrand	100	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-0.9355
chr10	81028095	81028268	protein_coding	Aes	exon	ENSMUSG00000054452	ProperStrand	34	chr16	23110901	23110991	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.8923
chr18	58360297	58363401	protein_coding	Fbn2	utr5	ENSMUSG00000024598	NonProperStrand	12	chr17	24857762	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	NonProperStrand	27	2	-inf
chr2	34629427	34629601	protein_coding	Hspa5	exon	ENSMUSG00000026864	ProperStrand	181	chrX	71517842	71517932	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-4.3992
chr5	65408159	65408252	protein_coding	Fam114a1	intron	ENSMUSG00000029185	NonProperStrand	8	chr16	23110986	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-5.7082
chr4	116827794	116827890	snoRNA	ENSMUSG00000064751_SNORD46	.	ENSMUSG00000064751	ProperStrand	132	chr3	123210883	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	5	-5.9682
chr10	80809668	80809684	protein_coding	Hmg20b	exon	ENSMUSG00000020232	ProperStrand	157	chr7	117189863	117189953	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-4.3448
chr5	90671982	90671998	protein_coding	Ankrd17	exon	ENSMUSG00000055204	NonProperStrand	5	chr16	23110913	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-7.3377
chr11	103060069	103060118	protein_coding	Fmnl1	utr3	ENSMUSG00000055805	ProperStrand	26	chr15	98350146	98350165	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-6.4037
chr1	59539683	59539700	protein_coding	Fzd7	utr5	ENSMUSG00000041075	ProperStrand	373	chr1	162966813	162966859	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-2.8074
chr6	120352632	120352672	protein_coding	Kdm5a	exon	ENSMUSG00000030180	ProperStrand	57	chr7	117189944	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.4262
chr2	49479821	49479859	protein_coding	Kif5c	intron	ENSMUSG00000026764	ProperStrand	10	chr1	89673606	89673696	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-6.7666
chr15	81354775	81354791	SINE	B3A	B2	chr15B3A81354761	ProperStrand	16	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.1079
chr5	88984034	88984124	protein_coding	Utp3	exon	ENSMUSG00000070697	ProperStrand	8	chr11	6428083	6428163	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-7.1562
chr9	61256598	61256629	protein_coding	Tle3	exon	ENSMUSG00000032280	ProperStrand	88	chr3	68889026	68889126	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	5	-11.8671
chr13	9833562	9833668	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr11	113762911	113762927	protein_coding	Sdk2	intron	ENSMUSG00000041592	NonProperStrand	98	1	-4.0186
chr9	78023107	78023220	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr9	120039533	120039657	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	15	-1.6433
chr7	148633553	148637137	protein_coding	Rplp2	utr5	ENSMUSG00000025508	ProperStrand	106	chr16	23110457	23110523	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-2.8927
chr6	69657216	69657233	LTR	IAPEz-int	ERVK	chr6IAPEz-int69657165	NonProperStrand	42	chr9	59525892	59525943	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	1	-7.8912
chr7	141123415	141123432	protein_coding	Adam12	exon	ENSMUSG00000054555	ProperStrand	18	chr17	71990941	71990999	snoRNA	ENSMUSG00000092713_CT010429.1	.	ENSMUSG00000092713	ProperStrand	182	1	-13.5317
chr6	5912981	5912998	protein_coding	Dync1i1	intron	ENSMUSG00000029757	ProperStrand	10	chr7	29136525	29136590	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.7572
chr2	4829164	4829180	protein_coding	Sephs1	utr3	ENSMUSG00000026662	NonProperStrand	271	chr10	80641969	80642114	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-3.2297
chr17	83614639	83614657	protein_coding	Pkdcc	utr5	ENSMUSG00000024247	NonProperStrand	3	chr4	131908236	131908318	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-7.2242
chr7	103994358	103994375	protein_coding	Odz4	exon	ENSMUSG00000048078	ProperStrand	93	chr7	116664794	116664922	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-3.3404
chr2	4974190	4974207	protein_coding	Optn	exon	ENSMUSG00000026672	ProperStrand	451	chrX	84483699	84483743	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	4	-13.6890
chr1	164608331	164609669	protein_coding	Prrc2c	exon	ENSMUSG00000040225	ProperStrand	413	chr17	24666542	24666559	protein_coding	Rab26	exon	ENSMUSG00000079657	NonProperStrand	6	2	-19.5260
chr14	119030245	119030335	protein_coding	Abcc4	exon	ENSMUSG00000032849	ProperStrand	137	chr5	147646734	147646814	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	2	-10.2303
chr8	82190665	82190692	protein_coding	Otud4	exon	ENSMUSG00000036990	ProperStrand	45	chr15	79913288	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.1312
chr19	46143532	46143622	protein_coding	Pprc1	exon	ENSMUSG00000055491	ProperStrand	143	chr4	131908815	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	8	-6.7074
chr5	143517204	143533696	protein_coding	Tnrc18	exon	ENSMUSG00000039477	ProperStrand	39	chr9	120038530	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-6.4799
chr5	74489201	74489288	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	NonProperStrand	6	chr17	28674499	28674517	protein_coding	4930511I11Rik	exon	ENSMUSG00000024223	ProperStrand	2	1	-inf
chr3	103557322	103557386	protein_coding	Hipk1	exon	ENSMUSG00000008730	ProperStrand	23	chr15	68036297	68036313	protein_coding	Zfat	intron	ENSMUSG00000022335	NonProperStrand	25	1	-16.9598
chr1	132568724	132568814	LINE	L1Md_F2	L1	chr1L1Md_F2132568344	ProperStrand	1	chr7	5360846	5360926	protein_coding	Vmn1r58	utr3	ENSMUSG00000078808	ProperStrand	5	1	-inf
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr13	101262433	101262518	protein_coding	Gtf2h2	utr5	ENSMUSG00000021639	ProperStrand	7	1	-10.7681
chr1	191492454	191494929	protein_coding	Cenpf	exon	ENSMUSG00000026605	ProperStrand	44	chr11	77995188	77995239	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	4	-inf
chr19	4153914	4154014	protein_coding	Coro1b	utr3	ENSMUSG00000024835	ProperStrand	13	chr18	75160717	75160777	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	1	-12.3024
chr5	143666217	143668342	protein_coding	Actb	utr5	ENSMUSG00000029580	ProperStrand	446	chrX	34622906	34622993	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	3	-1.5028
chrX	71554426	71554471	protein_coding	Gdi1	exon	ENSMUSG00000015291	ProperStrand	24	chr15	8952097	8956101	protein_coding	Ranbp3l	exon	ENSMUSG00000048424	ProperStrand	45	1	-15.7507
chr3	100369431	100369447	protein_coding	Man1a2	utr3	ENSMUSG00000008763	NonProperStrand	28	chr2	32818883	32818938	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-6.9808
chr9	15119287	15119358	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	chr1	173041608	173041649	tRNA	tRNA710-ValCAC	.	732120	ProperStrand	206	2	-4.8826
chr3	129593346	129597697	protein_coding	Pla2g12a	intron	ENSMUSG00000027999	ProperStrand	6	chr11	77996579	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-10.8210
chr6	87795542	87795761	protein_coding	Cnbp	exon	ENSMUSG00000030057	ProperStrand	46	chr5	149861455	149861471	protein_coding	Hmgb1	exon	ENSMUSG00000066551	ProperStrand	99	1	-12.8442
chr7	105241603	105241628	protein_coding	Myo7a	intron	ENSMUSG00000030761	NonProperStrand	33	chr7	117189952	117190042	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.4547
chr1	153602594	153602610	protein_coding	Edem3	utr5	ENSMUSG00000043019	ProperStrand	84	chr11	62416957	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-5.3842
chr11	115941075	115941589	protein_coding	Wbp2	exon	ENSMUSG00000034341	ProperStrand	39	chr16	23110533	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-5.5465
chr4	131908236	131908303	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	chr9	20693934	20693984	snoRNA	ENSMUSG00000077702_SNORD105	.	ENSMUSG00000077702	ProperStrand	41	1	-2.0019
chr7	29177619	29177709	protein_coding	Med29	utr5	ENSMUSG00000003444	NonProperStrand	134	chr11	33329207	33329297	protein_coding	Ranbp17	intron	ENSMUSG00000040594	NonProperStrand	29	1	-13.1729
chr10	23770362	23770378	protein_coding	Taar7f	exon	ENSMUSG00000060825	NonProperStrand	40	chr11	68886975	68887038	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-4.9214
chr10	69418703	69418722	protein_coding	Ank3	exon	ENSMUSG00000069601	ProperStrand	76	chr11	106362304	106362343	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-5.3800
chr17	35210038	35210054	protein_coding	Ly6g6d	intron	ENSMUSG00000073413	ProperStrand	7	chr4	131908759	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.0493
chr17	35801541	35801796	protein_coding	Vars2	exon	ENSMUSG00000038838	ProperStrand	19	chr11	77995189	77995244	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-8.4897
chr2	158185584	158185666	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr2	166890552	166890582	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	2	-2.4972
chr4	126703440	126704122	protein_coding	Sfpq	exon	ENSMUSG00000028820	ProperStrand	340	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-4.3491
chr12	55168916	55168932	protein_coding	Npas3	exon	ENSMUSG00000021010	ProperStrand	15	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-13.5874
chr8	83554975	83555055	lincRNA	Gm9725	intron	ENSMUSG00000037982	ProperStrand	1	chr8	83260542	83260632	protein_coding	Smarca5	intron	ENSMUSG00000031715	NonProperStrand	1	1	-inf
chr2	4974190	4974207	protein_coding	Optn	exon	ENSMUSG00000026672	ProperStrand	451	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-3.8197
chr1	81170408	81170425	protein_coding	9430031J16Rik	intron	ENSMUSG00000054976	ProperStrand	4	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-13.4061
chr10	77456181	77458014	protein_coding	Pfkl	exon	ENSMUSG00000020277	ProperStrand	179	chr9	15118332	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	5	-8.5261
chr4	57156111	57156130	protein_coding	Epb4.1l4b	utr5	ENSMUSG00000028434	ProperStrand	12	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-12.6507
chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	chr7	88489430	88489446	protein_coding	Rps17	intron	ENSMUSG00000061787	ProperStrand	105	1	-9.4959
chr1	183746638	183746679	protein_coding	Lbr	utr3	ENSMUSG00000004880	ProperStrand	97	chr9	120039628	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.4704
chr4	43505850	43505930	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr8	127419756	127419846	protein_coding	Exoc8	exon	ENSMUSG00000074030	ProperStrand	4	1	-8.5468
chr2	63936034	63936053	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr2	130102050	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-0.7800
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr10	23506322	23506348	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-1.2685
chr7	67123693	67123739	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	chr3	68889026	68889149	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	2	-1.1017
chr2	90235313	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	123622050	123622066	protein_coding	Hpd	exon	ENSMUSG00000029445	ProperStrand	254	1	-1.8993
chr11	98878370	98878460	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	chr19	44188468	44188548	snoRNA	ENSMUSG00000077391_SNORA12	.	ENSMUSG00000077391	ProperStrand	506	1	-2.3090
chr2	90703764	90703780	protein_coding	Mtch2	exon	ENSMUSG00000027282	NonProperStrand	2	chr13	17884652	17884702	protein_coding	Cdk13	intron	ENSMUSG00000041297	ProperStrand	29	1	-inf
chr7	116663565	116663770	protein_coding-noncoding	Rpl27a	utr5	ENSMUSG00000046364	ProperStrand	57	chr7	116663633	116663770	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	16	-inf
chr4	56910777	56910802	protein_coding	D730040F13Rik	intron	ENSMUSG00000055296	ProperStrand	48	chr5	130300496	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.8991
chr11	115431375	115439283	protein_coding	Nup85	exon	ENSMUSG00000020739	ProperStrand	33	chr16	23110966	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.8807
chr2	24825186	24827046	protein_coding	Wdr85	exon	ENSMUSG00000026975	ProperStrand	323	chr1	102076756	102076790	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	1	-6.0922
chr13	72763664	72763680	antisense	Gm20554	.	ENSMUSG00000093587	NonProperStrand	40	chr7	51505822	51505909	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	1	-9.4303
chr7	151684736	151700383	protein_coding	Ppfia1	exon	ENSMUSG00000037519	ProperStrand	32	chr16	23111374	23111469	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-6.0728
chr15	96005331	96005382	lincRNA	2610037D02Rik	intron	ENSMUSG00000086809	ProperStrand	4	chr1	71672559	71672607	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	1	-13.5018
chr10	30320342	30320358	protein_coding	Trmt11	intron	ENSMUSG00000019792	NonProperStrand	26	chr19	8963087	8963165	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.7706
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr6	83004437	83004453	protein_coding	Htra2	utr5	ENSMUSG00000068329	ProperStrand	17	1	-12.9913
chr11	88007257	88007273	protein_coding	Cuedc1	utr3	ENSMUSG00000018378	NonProperStrand	20	chr16	23110454	23110511	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.4825
chr12	112366440	112366460	SINE	B3	B2	chr12B3112366317	NonProperStrand	1	chr4	131866170	131866260	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-inf
chr9	24934995	24935035	protein_coding	Herpud2	exon	ENSMUSG00000008429	ProperStrand	8	chr16	32332945	32332967	protein_coding	Ubxn7	intron	ENSMUSG00000053774	NonProperStrand	8	1	-18.6452
chr11	3649570	3649587	protein_coding	Osbp2	intron	ENSMUSG00000020435	ProperStrand	60	chr4	131865866	131865970	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.7679
chr10	79244234	79244255	protein_coding	Prss57	utr3	ENSMUSG00000020323	ProperStrand	13	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.5141
chr18	36961593	36961612	misc_RNA	Vault	.	ENSMUSG00000065145	ProperStrand	177	chr18	36909081	36910863	protein_coding	Ik	exon	ENSMUSG00000024474	ProperStrand	60	5	-inf
chr1	33560464	33560481	protein_coding	Prim2	intron	ENSMUSG00000026134	NonProperStrand	5	chr15	34370545	34370665	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-8.5662
chr16	32631412	32631487	protein_coding	Tfrc	utr3	ENSMUSG00000022797	ProperStrand	71	chr4	131865869	131865969	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.5136
chr3	104268176	104269444	protein_coding	Lrig2	exon	ENSMUSG00000032913	ProperStrand	10	chr5	121655036	121655116	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-7.2897
chr11	100414998	100415014	protein_coding	Ttc25	exon	ENSMUSG00000006784	NonProperStrand	119	chr15	73417326	73417370	protein_coding	Slc45a4	exon	ENSMUSG00000079020	ProperStrand	127	1	-10.4328
chr4	43943351	43943367	protein_coding	Reck	intron	ENSMUSG00000028476	NonProperStrand	36	chr7	36366045	36366062	protein_coding	Rgs9bp	utr3	ENSMUSG00000056043	ProperStrand	12	1	-17.7763
chr7	129211420	129225363	protein_coding	Ubfd1	exon	ENSMUSG00000030870	ProperStrand	21	chr16	23110909	23111010	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-4.6345
chr10	80102797	80102831	protein_coding	Csnk1g2	utr3	ENSMUSG00000003345	ProperStrand	28	chr5	99372453	99372470	protein_coding	Prkg2	exon	ENSMUSG00000029334	ProperStrand	22	1	-16.8701
chr1	45448521	45448537	protein_coding	Col5a2	exon	ENSMUSG00000026042	ProperStrand	184	chr7	16524110	16524138	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	1	-7.4810
chr7	134678376	134678426	protein_coding	Srcap	exon	ENSMUSG00000053877	ProperStrand	69	chr7	116664848	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.3115
chr6	88841984	88842045	protein_coding	Mcm2	exon	ENSMUSG00000002870	ProperStrand	83	chr7	67125763	67125799	snoRNA	ENSMUSG00000089375_Snord107	.	ENSMUSG00000089375	ProperStrand	451	5	-21.9279
chrX	13269163	13269180	protein_coding	Cask	intron	ENSMUSG00000031012	ProperStrand	41	chr1	162965530	162965562	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.9824
chr5	141130997	141131087	LTR	MTC	MaLR	chr5MTC141131007	NonProperStrand	1	chr5	141131360	141131440	LTR	MTC	MaLR	chr5MTC141131357	NonProperStrand	1	1	-inf
chr2	48927391	48927407	protein_coding	Mbd5	intron	ENSMUSG00000036792	NonProperStrand	25	chr3	97020504	97020521	protein_coding	Bcl9	utr5	ENSMUSG00000038256	ProperStrand	94	1	-14.1791
chr4	116862572	116862662	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	chr15	34370545	34370625	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-0.8102
chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	chr15	79908930	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	2	-1.5787
chr17	33767553	33767618	protein_coding	Zfp414	exon	ENSMUSG00000073423	ProperStrand	12	chr6	115758048	115758133	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	3	-18.7722
chr12	71347267	71347283	protein_coding	Trim9	utr3	ENSMUSG00000021071	NonProperStrand	75	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-8.1466
chr12	109344997	109345040	protein_coding	Setd3	utr3	ENSMUSG00000056770	ProperStrand	21	chr6	148304038	148304057	protein_coding	Rps4y2	utr3	ENSMUSG00000063171	ProperStrand	47	1	-15.9763
chr8	108703281	108703327	protein_coding	Slc7a6	exon	ENSMUSG00000031904	ProperStrand	22	chr10	23505152	23505236	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.8416
chr10	56097167	56108373	protein_coding	Gja1	exon	ENSMUSG00000050953	ProperStrand	70	chr16	23110829	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	8	-6.1020
chr1	20793348	20793424	protein_coding	Mcm3	utr3	ENSMUSG00000041859	ProperStrand	142	chr1	162968212	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-5.1272
chr6	4706084	4706152	protein_coding	Peg10	exon	ENSMUSG00000092035	NonProperStrand	3	chr16	23110957	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	NonProperStrand	93	1	-18.8822
chr7	117189862	117190067	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr16	23111372	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	61	-9.1279
chr10	119652672	119654565	protein_coding	Tmbim4	exon	ENSMUSG00000020225	ProperStrand	11	chr9	120037992	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	3	-18.2669
chr10	80129540	80129620	protein_coding	Mknk2	utr3	ENSMUSG00000020190	ProperStrand	18	chr16	23110466	23110556	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-11.3301
chr10	40908454	40940743	protein_coding	Fig4	exon	ENSMUSG00000038417	ProperStrand	18	chr12	112779191	112779271	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-7.1608
chr16	64785738	64785806	protein_coding	Zfp654	exon	ENSMUSG00000047141	ProperStrand	2	chr8	73419702	73419792	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-10.3981
chr13	49243168	49243184	protein_coding	Wnk2	utr5	ENSMUSG00000037989	NonProperStrand	67	chr11	98878344	98878371	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-6.0670
chr11	3870152	3870169	protein_coding	Pes1	intron	ENSMUSG00000020430	ProperStrand	49	chr7	109160571	109161315	protein_coding	Numa1	exon	ENSMUSG00000066306	ProperStrand	148	1	-11.9099
chr10	62053446	62053465	protein_coding	Ddx21	exon	ENSMUSG00000020075	ProperStrand	137	chr3	68889069	68889169	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	4	-7.1713
chr6	87769189	87769558	protein_coding	Isy1	exon	ENSMUSG00000030056	ProperStrand	172	chr1	162967732	162967806	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	1	-8.1405
chr11	80965641	80965658	protein_coding	Accn1	exon	ENSMUSG00000020704	NonProperStrand	228	chr17	39985194	39985660	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	2	-5.7714
mmu-miR-6238	2	19	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr10	80643788	80643894	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	2	-5.8662
chr10	112362934	112363041	protein_coding	Atxn7l3b	utr3	ENSMUSG00000074748	ProperStrand	18	chr2	130102034	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-7.7579
chr2	163428098	163428114	protein_coding	Ttpal	utr5	ENSMUSG00000017679	NonProperStrand	3	chr12	106269346	106269446	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-10.4002
chr11	95824050	95824140	protein_coding	Igf2bp1	utr3	ENSMUSG00000013415	ProperStrand	140	chr15	102319076	102319128	protein_coding	Pcbp2	intron	ENSMUSG00000056851	ProperStrand	164	1	-9.5959
chr3	55987451	55987470	protein_coding	Nbea	utr5	ENSMUSG00000027799	ProperStrand	53	chr19	8798740	8798759	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-5.0410
chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	chr11	102340349	102340424	protein_coding	Gpatch8	exon	ENSMUSG00000034621	ProperStrand	49	1	-9.8524
chr13	6589123	6589144	protein_coding	Pfkp	intron	ENSMUSG00000021196	ProperStrand	197	chr5	117894014	117894033	protein_coding	Ksr2	intron	ENSMUSG00000061578	NonProperStrand	15	1	-13.7514
chr17	46814084	46814100	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr11	117858792	117858824	protein_coding	Pgs1	exon	ENSMUSG00000017715	ProperStrand	25	1	-11.0000
chr2	12269124	12269146	protein_coding	Fam188a	utr3	ENSMUSG00000026767	ProperStrand	11	chr8	98269956	98270077	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	3	-19.2272
chr15	7872939	7872970	protein_coding	Wdr70	intron	ENSMUSG00000039828	ProperStrand	16	chr9	15118246	15118321	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-9.8716
chr2	129033834	129033913	protein_coding	Slc20a1	exon	ENSMUSG00000027397	ProperStrand	81	chr7	116664819	116664909	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.0473
chr18	60937530	60938168	protein_coding	Rps14	utr3	ENSMUSG00000024608	ProperStrand	154	chr4	131865855	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.2081
chr16	57391707	57391758	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr11	106362653	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	NonProperStrand	1	1	-inf
chr17	79270523	79270589	protein_coding	Eif2ak2	exon	ENSMUSG00000024079	ProperStrand	11	chr1	63225625	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	3	-inf
chr1	75484537	75484553	protein_coding	Obsl1	exon	ENSMUSG00000026211	NonProperStrand	192	chr1	166124727	166125694	protein_coding	F5	exon	ENSMUSG00000026579	ProperStrand	7	1	-15.4404
chr7	16861383	16861412	protein_coding	Ccdc9	exon	ENSMUSG00000041375	ProperStrand	14	chr10	80641712	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	1	-10.4993
chr15	63779397	63779431	protein_coding	Fam49b	intron	ENSMUSG00000022378	ProperStrand	33	chr11	62416616	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-10.2978
chr1	34220944	34221029	protein_coding	Dst	exon	ENSMUSG00000026131	ProperStrand	461	chr14	63807289	63807309	protein_coding	Neil2	exon	ENSMUSG00000035121	NonProperStrand	3	1	-15.6252
chr3	33713610	33713626	protein_coding	Ccdc39	exon	ENSMUSG00000027676	ProperStrand	106	chr9	50816824	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	2	-16.7887
chr11	57174157	57174176	LINE	L1Md_F2	L1	chr11L1Md_F257172719	NonProperStrand	1	chr2	152151959	152152027	protein_coding	Rbck1	exon	ENSMUSG00000027466	ProperStrand	30	1	-inf
chr4	131908375	131908455	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr9	95799518	95804120	protein_coding	Atr	exon	ENSMUSG00000032409	ProperStrand	44	1	-7.8791
chr17	24665422	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	chr12	110874224	110874276	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	2	-3.5178
chr4	151851217	151851234	protein_coding	Nphp4	intron	ENSMUSG00000039577	ProperStrand	33	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-10.5750
chr5	136707644	136707662	protein_coding	Sh2b2	exon	ENSMUSG00000005057	NonProperStrand	101	chr16	23110829	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	9	-4.7411
chr5	45903173	45903258	protein_coding	Lap3	exon	ENSMUSG00000039682	ProperStrand	87	chr10	23505152	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-3.9018
chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr15	90059131	90059231	protein_coding	Alg10b	utr3	ENSMUSG00000075470	ProperStrand	15	1	-6.2900
chr10	8532625	8532641	protein_coding	Sash1	intron	ENSMUSG00000015305	NonProperStrand	14	chr12	17552949	17553006	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	2	-12.8596
chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	chr4	11507009	11507057	protein_coding	Rad54b	exon	ENSMUSG00000066307	ProperStrand	2	1	-15.6043
chr4	137213432	137213532	protein_coding	Usp48	utr3	ENSMUSG00000043411	ProperStrand	135	chr11	62416585	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-3.6268
chr5	121258601	121258645	protein_coding	Oas1c	exon	ENSMUSG00000001166	ProperStrand	1	chr15	96449517	96449534	protein_coding	Slc38a1	intron	ENSMUSG00000023169	ProperStrand	69	1	-inf
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr4	138963784	138963830	protein_coding	Ubr4	exon	ENSMUSG00000066036	ProperStrand	304	1	-3.8841
chr8	77593657	77593673	protein_coding	Tom1	utr3	ENSMUSG00000042870	ProperStrand	30	chr7	52381738	52381759	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-8.9667
chr6	113071608	113071698	protein_coding	Setd5	exon	ENSMUSG00000034269	ProperStrand	162	chr1	88247768	88247848	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-3.2287
chr4	59135000	59135017	protein_coding	AI481877	intron	ENSMUSG00000038598	ProperStrand	2	chr5	23358052	23358073	snoRNA	ENSMUSG00000093321_Snord93	.	ENSMUSG00000093321	ProperStrand	218	1	-18.2438
chr16	23110791	23110893	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr11	101466308	101466350	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	7	-19.0184
mmu-miR-6238	1	18	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr1	34276243	34276368	protein_coding	Dst	utr5	ENSMUSG00000026131	ProperStrand	461	2	-10.4577
chr12	118832662	118832682	protein_coding	Rapgef5	intron	ENSMUSG00000041992	ProperStrand	14	chr16	23111383	23111466	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	NonProperStrand	38	1	-17.2581
chr1	91789296	91790115	protein_coding	Agap1	utr3	ENSMUSG00000055013	ProperStrand	229	chr17	24857742	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-1.0921
chr7	53089954	53089976	protein_coding	Grin2d	intron	ENSMUSG00000002771	NonProperStrand	31	chr4	126892622	126910789	protein_coding	Dlgap3	exon	ENSMUSG00000042388	ProperStrand	12	1	-17.6772
chr12	17552910	17555432	protein_coding	Odc1	intron	ENSMUSG00000011179	ProperStrand	173	chr10	23505152	23505245	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	7	-4.3263
chr9	44189447	44189625	protein_coding	Hyou1	exon	ENSMUSG00000032115	ProperStrand	145	chr2	178194847	178194864	protein_coding	Cdh26	exon	ENSMUSG00000039155	NonProperStrand	77	1	-11.0407
chr16	91405676	91405692	protein_coding	Ifnar2	utr3	ENSMUSG00000022971	NonProperStrand	23	chr2	145077958	145209255	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-9.6563
chr2	164665669	164666009	protein_coding	Pltp	exon	ENSMUSG00000017754	ProperStrand	15	chr7	116663745	116663764	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-5.1056
chr8	107815063	107815080	protein_coding	Exoc3l	intron	ENSMUSG00000043251	NonProperStrand	5	chr5	112865460	112865476	protein_coding	Sez6l	exon	ENSMUSG00000058153	ProperStrand	81	1	-17.7110
chr6	132465021	132465039	LTR	RLTR9C	ERVK	chr6RLTR9C132464827	NonProperStrand	1	chr4	56910554	56910618	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-inf
chr11	109330460	109330478	protein_coding	Slc16a6	intron	ENSMUSG00000041920	NonProperStrand	9	chr4	131908689	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	6	-19.7812
chr18	14955509	14957604	protein_coding	Taf4b	exon	ENSMUSG00000054321	ProperStrand	8	chr7	29136555	29136645	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-6.2203
chr1	71697152	71697195	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chrX	99383282	99383325	protein_coding	Rps4x	exon	ENSMUSG00000031320	ProperStrand	139	4	-18.1058
chr8	109697728	109697818	protein_coding	Cyb5b	intron	ENSMUSG00000031924	ProperStrand	39	chr7	116664820	116664900	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.3149
chr11	57874438	57874528	protein_coding	Larp1	utr3	ENSMUSG00000037331	ProperStrand	201	chr2	158185542	158185647	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	13	-20.5658
chr15	101920340	101926934	protein_coding	Eif4b	utr3	ENSMUSG00000058655	ProperStrand	484	chr11	106362557	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	2	-5.7555
chr1	93342189	93345290	protein_coding	Per2	exon	ENSMUSG00000055866	ProperStrand	114	chr9	120038467	120038529	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.9480
chr10	127553153	127553178	protein_coding	Baz2a	exon	ENSMUSG00000040054	ProperStrand	274	chr15	5068432	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-3.1805
chr14	111226628	111226708	LINE	Lx2	L1	chr14Lx2111226521	NonProperStrand	1	chr14	59872802	59872892	protein_coding	Gm6904	intron	ENSMUSG00000090881	ProperStrand	1	1	-inf
chr13	81962989	81963009	SINE	B1F2	Alu	chr13B1F281962960	ProperStrand	15	chr11	6428077	6428157	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-9.6285
chr9	70960077	70960093	protein_coding	Aqp9	exon	ENSMUSG00000032204	NonProperStrand	118	chr7	148634701	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	7	-18.7635
chr7	116663634	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	chr13	90238585	90238723	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	7	-2.1357
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr6	33812203	33860496	protein_coding	Exoc4	exon	ENSMUSG00000029763	ProperStrand	120	1	-7.2238
chr7	38745286	38745327	protein_coding	C80913	utr3	ENSMUSG00000030421	ProperStrand	25	chr11	97489600	97489617	protein_coding	E130012A19Rik	exon	ENSMUSG00000043439	NonProperStrand	110	1	-13.8708
chr2	13158518	13158553	protein_coding	Rsu1	intron	ENSMUSG00000026727	ProperStrand	13	chr16	23111447	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.8569
chr8	72287172	72287189	protein_coding	Zfp866	utr3	ENSMUSG00000043090	NonProperStrand	134	chr2	26494708	26494840	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	3	-4.9517
chr1	139976731	139976747	protein_coding	Ptprc	exon	ENSMUSG00000026395	ProperStrand	27	chr9	15118323	15118371	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-4.9852
chr13	49218439	49218455	protein_coding	Wnk2	intron	ENSMUSG00000037989	NonProperStrand	67	chr11	75262704	75262850	protein_coding	Wdr81	exon	ENSMUSG00000045374	ProperStrand	6	1	-17.5918
chr2	91613185	91613203	protein_coding	Ambra1	exon	ENSMUSG00000040506	ProperStrand	65	chr10	23505152	23505237	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.1260
chr19	8799581	8799644	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	chr10	110918549	110918693	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	10	-2.0530
chr4	43505813	43505903	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr8	96552781	96552803	protein_coding	Nudt21	exon	ENSMUSG00000031754	ProperStrand	33	6	-19.6462
chr6	112689098	112689322	protein_coding	Srgap3	exon	ENSMUSG00000030257	NonProperStrand	208	chr11	102294588	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	1	-6.4226
chr4	128899900	128899916	protein_coding	C77080	exon	ENSMUSG00000050390	NonProperStrand	28	chr16	23110461	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.8373
chr5	136707644	136707662	protein_coding	Sh2b2	exon	ENSMUSG00000005057	NonProperStrand	101	chr4	131865380	131865513	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	2	-5.2507
chr6	120281518	120281618	protein_coding	Ccdc77	intron	ENSMUSG00000030177	ProperStrand	17	chr11	77995191	77995239	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-8.7173
chr8	86782815	86784198	protein_coding	Ccdc130	exon	ENSMUSG00000004994	ProperStrand	29	chr1	89822645	89822682	protein_coding	Dgkd	exon	ENSMUSG00000070738	ProperStrand	39	1	-15.6470
chr2	154171683	154171700	protein_coding	Cdk5rap1	exon	ENSMUSG00000027487	ProperStrand	75	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-8.4797
chr1	74577113	74577156	protein_coding	Rqcd1	utr3	ENSMUSG00000026174	ProperStrand	16	chr5	113515930	113515946	protein_coding	2900026A02Rik	utr3	ENSMUSG00000051339	NonProperStrand	29	1	-17.6077
chr11	59661803	59661819	protein_coding	Nt5m	exon	ENSMUSG00000032615	ProperStrand	17	chr12	85350481	85350499	protein_coding	Acot1	utr5	ENSMUSG00000072949	ProperStrand	72	1	-15.5114
chrX	70056827	70056845	LINE	Lx8	L1	chrXLx870056775	NonProperStrand	1	chr5	31376717	31376771	protein_coding	Cad	exon	ENSMUSG00000013629	ProperStrand	260	1	-inf
chr11	97489600	97489617	protein_coding	E130012A19Rik	exon	ENSMUSG00000043439	NonProperStrand	110	chr9	64022854	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-6.8198
chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	chr1	162966813	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-1.2736
chrX	130830178	130830195	protein_coding	Tmem35	intron	ENSMUSG00000033578	ProperStrand	16	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.1079
chr14	31628293	31628340	protein_coding	Sfmbt1	exon	ENSMUSG00000006527	ProperStrand	2	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-15.6461
chr8	124961077	124961098	protein_coding	Mvd	exon	ENSMUSG00000006517	ProperStrand	13	chr8	32260342	32260432	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-7.6754
chr7	28065900	28065943	protein_coding	Numbl	exon	ENSMUSG00000063160	ProperStrand	35	chr18	33954849	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	3	-10.8705
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr8	129468746	129468806	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-1.8649
chr11	105193292	105193309	protein_coding	Mrc2	exon	ENSMUSG00000020695	ProperStrand	12	chr18	33954816	33954940	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-6.6526
chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	chr17	13116452	13116519	protein_coding	Tcp1	exon	ENSMUSG00000068039	ProperStrand	116	2	-11.9294
chr6	115876313	115876330	protein_coding	Ift122	exon	ENSMUSG00000030323	ProperStrand	20	chr19	8799581	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-8.9766
chrX	96245892	96245908	protein_coding	Stard8	intron	ENSMUSG00000031216	ProperStrand	142	chr8	73419729	73419776	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-1.6857
chr7	50711899	50712000	protein_coding	Etfb	exon	ENSMUSG00000004610	ProperStrand	5	chr1	155287312	155287356	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	2	-19.0750
chr9	58066529	58066629	protein_coding	Pml	utr3	ENSMUSG00000036986	ProperStrand	45	chr5	108334264	108336490	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-5.4406
chr11	120650552	120650627	protein_coding	Dus1l	utr3	ENSMUSG00000025155	ProperStrand	24	chr7	116663692	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.1859
chr13	110231347	110231365	protein_coding	Pde4d	intron	ENSMUSG00000021699	ProperStrand	92	chr14	65372838	65372889	snoRNA	ENSMUSG00000064442_SNORA36	.	ENSMUSG00000064442	ProperStrand	296	1	-9.2571
chr6	27835630	27835649	protein_coding	Grm8	intron	ENSMUSG00000024211	NonProperStrand	15	chr8	87574380	87574409	protein_coding	Tnpo2	exon	ENSMUSG00000031691	ProperStrand	92	1	-15.2837
chr5	111218425	111235391	protein_coding	Ulk1	exon	ENSMUSG00000029512	ProperStrand	92	chr4	131865933	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-2.2365
chr11	115708925	115709577	protein_coding	Llgl2	exon	ENSMUSG00000020782	ProperStrand	62	chr3	152450608	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	14	-19.7978
chr6	119889694	119988573	protein_coding	Wnk1	utr5	ENSMUSG00000045962	ProperStrand	221	chr11	69483136	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-2.2237
chr11	31718380	31718515	lincRNA	D630024D03Rik	exon	ENSMUSG00000085772	ProperStrand	5	chr7	52381731	52381758	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-12.7285
chr4	56910565	56910629	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	chr14	31827478	31827544	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-0.6956
chr2	179322379	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	1	-7.3078
chr9	44161028	44161078	protein_coding	Vps11	exon	ENSMUSG00000032127	ProperStrand	19	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-9.3000
chr9	40612868	40612921	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	chr1	162966812	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	4	-9.5183
chr2	84679411	84679429	protein_coding	Slc43a1	utr5	ENSMUSG00000027075	NonProperStrand	10	chr2	32818840	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	3	-19.8709
chr9	120039533	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	chr7	118219574	118219740	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	42	-4.0377
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr1	162965983	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-0.8987
chr17	68152254	68152334	protein_coding	Lama1	exon	ENSMUSG00000032796	ProperStrand	168	chr5	130300474	130300546	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-0.9634
chr5	140913353	140914287	protein_coding	Eif3b	exon	ENSMUSG00000056076	ProperStrand	66	chr17	24857720	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	3	-5.8261
chr4	153714863	153714879	protein_coding	Prdm16	exon	ENSMUSG00000039410	NonProperStrand	18	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.5840
chr14	16502129	16502148	LTR	RLTR13B4	ERVK	chr14RLTR13B416501627	NonProperStrand	2	chr14	51684890	51684920	tRNA	tRNA704-ThrTGT	.	1912481	ProperStrand	30	1	-inf
chr7	6659108	6659165	protein_coding	Peg3	utr3	ENSMUSG00000002265	ProperStrand	8	chr4	131865866	131865956	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.4974
chr9	78326996	78327106	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-1.3267
chr8	46092656	46095214	protein_coding	Fat1	exon	ENSMUSG00000070047	ProperStrand	306	chr16	23110557	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-1.4390
chr2	90235305	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	88489430	88489446	protein_coding	Rps17	intron	ENSMUSG00000061787	ProperStrand	105	1	-3.4154
chr2	168392474	168392554	protein_coding-noncoding	Nfatc2	utr3	ENSMUSG00000027544	NonProperStrand	1	chr2	168392850	168392940	protein_coding	Nfatc2	intron	ENSMUSG00000027544	NonProperStrand	49	1	-inf
chr19	42225881	42225897	protein_coding	Marveld1	utr3	ENSMUSG00000044345	NonProperStrand	112	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-6.5007
chr1	88253184	88253284	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chr18	31931401	31931441	protein_coding	Ammecr1l	exon	ENSMUSG00000041915	ProperStrand	3	1	-13.7147
chr9	121823892	121823908	protein_coding	Cyp8b1	exon	ENSMUSG00000050445	NonProperStrand	101	chr17	24857716	24857749	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.4782
chr10	114724877	114724949	Low_complexity	GA-rich	Low_complexity	chr10GA-rich114724878	NonProperStrand	1	chr19	5801169	5801241	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	1	-inf
chr19	41970608	41970624	protein_coding	Rrp12	utr5	ENSMUSG00000035049	ProperStrand	106	chr13	98022722	98022744	protein_coding	Enc1	utr3	ENSMUSG00000041773	ProperStrand	24	1	-14.0294
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	65136119	65136136	LTR	ORR1D2-int	MaLR	chr5ORR1D2-int65135280	ProperStrand	30	1	-5.8128
chr4	43505689	43505779	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr9	21880915	21880987	protein_coding	Ecsit	exon	ENSMUSG00000066839	ProperStrand	4	1	-8.5468
chr4	86482320	86482403	protein_coding	Dennd4c	exon	ENSMUSG00000038024	ProperStrand	42	chr13	23623303	23623346	protein_coding	Hist1h4h	utr3	ENSMUSG00000060981	ProperStrand	30	9	-inf
chr11	6519863	6519943	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	chr1	89673608	89673698	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	7	-2.4358
chr16	55997397	55997461	protein_coding	Rpl24	intron	ENSMUSG00000022601	ProperStrand	149	chr4	25619730	25619747	protein_coding	Fut9	intron	ENSMUSG00000055373	ProperStrand	10	1	-15.1556
chr12	109441273	109441325	protein_coding	Ccnk	utr3	ENSMUSG00000021258	ProperStrand	31	chr7	117189960	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.5752
chr4	131908689	131908863	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	chr1	162967115	162967163	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	11	-0.8801
chr5	122907543	122921252	protein_coding	Atp2a2	exon	ENSMUSG00000029467	ProperStrand	166	chr11	55296262	55296332	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	12	-inf
chr12	17219673	17219763	LTR	MTA_Mm	MaLR	chr12MTA_Mm17219537	ProperStrand	1	chr18	9877645	9877725	protein_coding	Colec12	utr3	ENSMUSG00000036103	NonProperStrand	10	1	-inf
chr10	126737110	126737294	protein_coding	Mars	exon	ENSMUSG00000040354	ProperStrand	38	chr7	117166723	117166813	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	7	-19.5656
chrX	147524944	147525190	protein_coding	Tsr2	exon	ENSMUSG00000025264	ProperStrand	3	chr4	131865384	131865474	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-10.2531
chr12	111862809	111891592	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr7	116663634	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	5	-0.9146
chr11	33061576	33061616	protein_coding	Npm1	exon	ENSMUSG00000057113	ProperStrand	352	chr19	8799613	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-3.3713
chr11	77420961	77420979	protein_coding	Taok1	utr5	ENSMUSG00000017291	ProperStrand	41	chr11	67005924	67005940	protein_coding	Myh2	exon	ENSMUSG00000033196	ProperStrand	66	1	-13.8923
chr1	93287207	93287603	protein_coding	Ilkap	intron	ENSMUSG00000026309	ProperStrand	53	chr5	130300420	130300510	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.7243
chrX	150765543	150765559	LINE	L1_Mus2	L1	chrXL1_Mus2150765117	NonProperStrand	49	chr2	32563527	32563544	protein_coding	Cdk9	exon	ENSMUSG00000009555	NonProperStrand	49	1	-14.1407
chr15	88929923	88929968	protein_coding	Tubgcp6	utr3	ENSMUSG00000051786	ProperStrand	15	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.0842
chr4	50041126	50041216	DNA	URR1B	MER1_type	chr4URR1B50041138	NonProperStrand	1	chr4	50040971	50041051	LINE	L1MA4	L1	chr4L1MA450040927	ProperStrand	1	1	-inf
chr16	23111387	23111487	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	NonProperStrand	38	chr8	129468746	129468816	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	NonProperStrand	22	1	-16.2903
chr1	99604045	99604145	protein_coding	Ppip5k2	utr3	ENSMUSG00000040648	ProperStrand	35	chr6	115757992	115758041	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-6.5358
chrX	152009278	152009294	protein_coding	Ptchd1	exon	ENSMUSG00000041552	NonProperStrand	294	chr1	162967507	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-0.9457
chr4	129662259	129662276	protein_coding	Bai2	utr5	ENSMUSG00000028782	ProperStrand	119	chr7	134671387	134671504	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	3	-14.8162
chr6	117130806	117130866	protein_coding	Cxcl12	utr3	ENSMUSG00000061353	ProperStrand	2	chr4	131908236	131908286	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-8.3123
chr2	170520528	170520545	Other	RMER1B	Other	chr2RMER1B170520441	ProperStrand	12	chr4	131908373	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.2270
chr16	38582112	38582202	protein_coding	Tmem39a	exon	ENSMUSG00000002845	ProperStrand	9	chr4	131865864	131865944	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.2544
chr7	13516173	13516205	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr3	89750435	89750451	protein_coding	Atp8b2	exon	ENSMUSG00000060671	ProperStrand	140	1	-6.9789
chr16	72719759	72719776	protein_coding	Robo1	intron	ENSMUSG00000022883	ProperStrand	47	chr11	69481387	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.6486
chr1	74638254	74638462	protein_coding	Bcs1l	exon	ENSMUSG00000026172	ProperStrand	11	chr15	72638705	72638722	protein_coding	Trappc9	intron	ENSMUSG00000047921	NonProperStrand	53	4	-21.8486
chr19	20008491	20008581	LTR	MLT1D	MaLR	chr19MLT1D20008249	NonProperStrand	1	chr19	20008774	20008864	LTR	MTC	MaLR	chr19MTC20008555	ProperStrand	1	1	-inf
chr9	58081675	58081755	protein_coding	Pml	intron	ENSMUSG00000036986	ProperStrand	45	chr8	73419657	73419747	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.6573
chr2	27624097	27624117	Low_complexity	GA-rich	Low_complexity	chr2GA-rich27624091	ProperStrand	5	chr3	123210878	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-16.6642
chr13	9833549	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr8	113499746	113499831	protein_coding	Ddx19a	utr3	ENSMUSG00000015023	ProperStrand	21	1	-7.0324
chr12	98173638	98173656	LINE	Lx2	L1	chr12Lx298173579	ProperStrand	1	chr10	110918634	110918686	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-inf
chr9	88417192	88417342	lincRNA	Snhg5	exon	ENSMUSG00000032424	ProperStrand	13	chr4	131908236	131908295	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-10.1656
chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	2	-4.5112
chr5	118477951	118477967	protein_coding	Tesc	exon	ENSMUSG00000029359	ProperStrand	114	chr17	66797857	66797931	protein_coding	1110012J17Rik	exon	ENSMUSG00000052105	ProperStrand	60	1	-12.0247
chr2	93543637	93543653	protein_coding	Ext2	intron	ENSMUSG00000027198	NonProperStrand	21	chr4	56910561	56910628	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-8.2087
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr5	135884630	135884646	protein_coding	Hip1	utr3	ENSMUSG00000039959	NonProperStrand	23	1	-11.3090
chr11	117863760	117863776	protein_coding	Pgs1	exon	ENSMUSG00000017715	NonProperStrand	4	chr17	24857717	24857775	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-7.6570
chr14	22423705	22423785	protein_coding	Myst4	intron	ENSMUSG00000021767	NonProperStrand	7	chr16	3851472	3851562	protein_coding	Zfp174	intron	ENSMUSG00000054939	ProperStrand	1	1	-inf
chr6	49206951	49206980	protein_coding	Tra2a	intron	ENSMUSG00000029817	ProperStrand	54	chr18	33954877	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	3	-9.1399
chr2	90235292	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	82679644	82680789	protein_coding	Hk2	exon	ENSMUSG00000000628	ProperStrand	88	1	-3.7407
chr9	117080240	117080256	protein_coding	Rbms3	intron	ENSMUSG00000039607	NonProperStrand	54	chr14	31827503	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-7.1543
chr16	17045482	17045562	protein_coding	Mapk1	utr3	ENSMUSG00000063358	ProperStrand	67	chr8	73419657	73419747	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.9329
chr6	124768566	124768601	protein_coding	Usp5	exon	ENSMUSG00000038429	ProperStrand	35	chr11	59276874	59276890	protein_coding	Zfp867	exon	ENSMUSG00000054519	NonProperStrand	1	1	-inf
chr11	100819682	100819749	protein_coding	Ptrf	utr3	ENSMUSG00000004044	ProperStrand	14	chr11	69481335	69481412	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-6.0079
chr17	57161042	57161142	protein_coding	Khsrp	utr3	ENSMUSG00000007670	NonProperStrand	4	chr12	112779227	112779253	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	NonProperStrand	10	1	-19.3291
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr2	32086678	32086712	protein_coding	Prrc2b	utr3	ENSMUSG00000039262	ProperStrand	344	1	-5.1599
chr5	123622050	123622066	protein_coding	Hpd	exon	ENSMUSG00000029445	ProperStrand	254	chr5	121655032	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	3	-3.9782
chr9	57217029	57217046	LINE	Lx4A	L1	chr9Lx4A57216705	ProperStrand	16	chr2	130101265	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-9.2562
chr11	4940375	4941761	protein_coding	Ap1b1	exon	ENSMUSG00000009090	ProperStrand	43	chr15	34370544	34370624	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	5	-17.2491
chr5	42136455	42136473	Low_complexity	GA-rich	Low_complexity	chr5GA-rich42136449	NonProperStrand	106	chr19	8798484	8798553	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-6.9006
chr9	65049532	65049610	snRNA	ENSMUSG00000075930_U5	.	ENSMUSG00000075930	ProperStrand	175	chr5	147646413	147646477	snoRNA	ENSMUSG00000077185_SNORD102	.	ENSMUSG00000077185	ProperStrand	142	1	-9.4379
chr12	27004522	27004541	protein_coding	Rnf144a	intron	ENSMUSG00000020642	ProperStrand	15	chr15	79913297	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-6.2900
chr9	30913726	30913816	protein_coding	St14	exon	ENSMUSG00000031995	ProperStrand	90	chr2	26494727	26494807	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.3986
chr8	108167485	108167507	protein_coding	Ctcf	utr5	ENSMUSG00000005698	ProperStrand	75	chr19	8799021	8799078	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-5.3960
chr3	145601280	145601865	protein_coding	2410004B18Rik	exon	ENSMUSG00000036873	ProperStrand	10	chr5	130300458	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-14.0681
chr16	11144305	11144404	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr3	153574574	153574634	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	NonProperStrand	3	1	-16.8984
chr1	75387555	75387571	protein_coding	Speg	exon	ENSMUSG00000026207	NonProperStrand	11	chr9	20872130	20872149	protein_coding	Fdx1l	utr3	ENSMUSG00000079677	ProperStrand	5	1	-19.4286
chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr11	62418013	62418089	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	15	-0.8188
chr11	100414998	100415014	protein_coding	Ttc25	exon	ENSMUSG00000006784	NonProperStrand	119	chr4	85035073	85035122	protein_coding	Sh3gl2	utr3	ENSMUSG00000028488	ProperStrand	12	1	-15.2302
chr1	4822392	4827111	protein_coding	Lypla1	exon	ENSMUSG00000025903	ProperStrand	12	chr8	112363200	112363275	snoRNA	ENSMUSG00000077549_Snord71	.	ENSMUSG00000077549	ProperStrand	196	1	-14.2315
chr6	120242738	120242779	protein_coding	B4galnt3	intron	ENSMUSG00000041372	ProperStrand	36	chr2	91436229	91436267	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-8.5213
chr7	116082028	116082044	protein_coding	Eif3f	exon	ENSMUSG00000031029	ProperStrand	69	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-11.4041
chr4	107596083	107596100	protein_coding	Cpt2	utr5	ENSMUSG00000028607	NonProperStrand	106	chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	1	-10.5422
chr17	47735627	47735717	protein_coding	Ccnd3	exon	ENSMUSG00000034165	ProperStrand	58	chr11	69483194	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.5077
chr19	5104985	5105091	protein_coding	Rab1b	intron	ENSMUSG00000024870	ProperStrand	133	chr7	117190026	117190059	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-1.9621
chr9	19462412	19462562	LINE	L1Md_A	L1	chr9L1Md_A19461964	ProperStrand	81	chr14	123811141	123811273	protein_coding	Nalcn	intron	ENSMUSG00000000197	ProperStrand	7	2	-inf
chr3	38353967	38354067	protein_coding	Ankrd50	exon	ENSMUSG00000044864	ProperStrand	36	chr18	35714232	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.4028
chr17	31758340	31758399	protein_coding	Cbs	intron	ENSMUSG00000024039	ProperStrand	12	chrX	20192468	20192485	protein_coding	Ndufb11	utr3	ENSMUSG00000031059	NonProperStrand	4	1	-20.4237
chr13	31936258	31936280	protein_coding	Gmds	intron	ENSMUSG00000038372	ProperStrand	27	chr16	23111772	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.2801
chr10	74762172	74762189	protein_coding	Specc1l	intron	ENSMUSG00000033444	ProperStrand	36	chr10	80078436	80078452	protein_coding	Scamp4	utr3	ENSMUSG00000078441	NonProperStrand	20	1	-16.5780
chr13	103551057	103551099	protein_coding	Mast4	exon	ENSMUSG00000034751	ProperStrand	150	chr1	53219102	53219119	protein_coding	1700019A02Rik	intron	ENSMUSG00000060715	ProperStrand	23	1	-13.4152
chr19	44188427	44188451	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr1	169393645	169393661	protein_coding	Lrrc52	intron	ENSMUSG00000040485	NonProperStrand	11	1	-11.2504
chr2	131003453	131003544	protein_coding	Cenpb	utr3	ENSMUSG00000068267	ProperStrand	26	chr5	130300500	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	7	-inf
chr15	76734517	76734756	protein_coding	Rpl8	utr5	ENSMUSG00000003970	ProperStrand	191	chr15	79913288	79913346	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	5	-8.5418
chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	chrX	74851306	74851324	protein_coding	Tbl1x	intron	ENSMUSG00000025246	ProperStrand	56	1	-9.8960
chr3	108237119	108240429	protein_coding	Sars	exon	ENSMUSG00000068739	ProperStrand	45	chr5	130300477	130300556	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.0143
chr10	80072480	80072505	protein_coding	Scamp4	exon	ENSMUSG00000078441	ProperStrand	54	chr16	23110543	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.6430
chr11	106643401	106643475	protein_coding	Ddx5	exon	ENSMUSG00000020719	ProperStrand	181	chr9	9081984	9082002	protein_coding	Arhgap42	intron	ENSMUSG00000050730	NonProperStrand	7	1	-15.5575
chr5	93612358	93635390	protein_coding	Ccni	exon	ENSMUSG00000063015	ProperStrand	43	chr16	23110911	23110962	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-3.4814
chr6	71558678	71558708	protein_coding	Kdm3a	intron	ENSMUSG00000053470	ProperStrand	41	chr3	123210854	123210891	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.7108
chr4	140121137	140121154	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	chr10	23505152	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-2.3213
chr7	87871640	87871702	protein_coding	Iqgap1	exon	ENSMUSG00000030536	ProperStrand	43	chr16	23111776	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.4531
chr16	5256015	5256031	protein_coding	Fam86	utr5	ENSMUSG00000022544	ProperStrand	231	chr9	120038491	120038528	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-0.9454
chr6	113059787	113059841	protein_coding-noncoding	Setd5	utr5	ENSMUSG00000034269	ProperStrand	5	chr10	110918548	110918638	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-8.4568
chr5	136108754	136108770	protein_coding	Rhbdd2	exon	ENSMUSG00000039917	ProperStrand	6	chr15	34370631	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-8.1636
chr17	4082268	4082299	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr9	113571630	113580969	protein_coding	Pdcd6ip	exon	ENSMUSG00000032504	ProperStrand	53	1	-10.2148
chr15	10504979	10504995	protein_coding	Rai14	exon	ENSMUSG00000022246	ProperStrand	180	chr15	79913317	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-1.7118
chr3	97817679	97851652	protein_coding	Notch2	exon	ENSMUSG00000027878	ProperStrand	86	chr1	157444869	157444888	protein_coding	Acbd6	intron	ENSMUSG00000033701	NonProperStrand	4	1	-18.3303
chrX	108217810	108217827	LINE	L1_Mus4	L1	chrXL1_Mus4108216540	NonProperStrand	6	chr1	162965531	162965588	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-7.8657
chr5	115132874	115132964	protein_coding	Gltp	intron	ENSMUSG00000011884	ProperStrand	10	chr5	130300436	130300516	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-5.9242
chr3	52388277	52388294	SINE	B4A	B4	chr3B4A52388218	ProperStrand	169	chr6	38553832	38553849	protein_coding	Luc7l2	utr3	ENSMUSG00000029823	NonProperStrand	5	1	-16.4016
chr18	61715366	61715383	protein_coding	Csnk1a1	utr5	ENSMUSG00000024576	NonProperStrand	35	chr18	35716789	35716879	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	5	-13.7894
chr10	119548096	119548176	protein_coding	Helb	exon	ENSMUSG00000020228	ProperStrand	41	chr19	8963078	8963168	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.9336
chr15	82034843	82034943	protein_coding	Srebf2	utr3	ENSMUSG00000022463	ProperStrand	592	chr2	26493365	26493402	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	7	-5.8879
chr15	84034444	84034482	protein_coding	Samm50	exon	ENSMUSG00000022437	ProperStrand	51	chr10	126434525	126434561	protein_coding	Ctdsp2	utr3	ENSMUSG00000078429	ProperStrand	74	1	-13.2223
chr2	29583187	29583281	protein_coding	Rapgef1	intron	ENSMUSG00000039844	ProperStrand	58	chr2	160191558	160191574	protein_coding	Mafb	exon	ENSMUSG00000074622	ProperStrand	31	3	-19.2756
chrX	146956247	146956347	protein_coding	Apex2	utr3	ENSMUSG00000025269	ProperStrand	8	chr7	29136575	29136648	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-6.2203
chr13	23714239	23714289	protein_coding	Hist1h1e	exon	ENSMUSG00000051627	ProperStrand	41	chr7	29136525	29136561	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.0293
chr11	115325163	115325253	protein_coding-noncoding	Slc16a5	utr5	ENSMUSG00000045775	NonProperStrand	1	chr11	115325408	115325498	protein_coding	Slc16a5	intron	ENSMUSG00000045775	NonProperStrand	1	1	-inf
chr11	48615181	48615208	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	chr7	36412424	36412518	protein_coding	Ankrd27	exon	ENSMUSG00000034867	ProperStrand	132	5	-19.7204
chr10	89282305	89282321	protein_coding	Uhrf1bp1l	utr3	ENSMUSG00000019951	NonProperStrand	55	chr19	8963027	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	5	-11.4293
chr17	4082235	4082287	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr2	155102603	155102624	protein_coding	Pigu	intron	ENSMUSG00000038383	ProperStrand	14	1	-12.9301
chr2	22747877	22747967	SINE	B3A	B2	chr2B3A22747880	ProperStrand	1	chr2	22748147	22748237	SINE	PB1D10	Alu	chr2PB1D1022748141	ProperStrand	1	1	-inf
chr6	88435849	88435865	protein_coding	Ruvbl1	exon	ENSMUSG00000030079	NonProperStrand	54	chr19	43738355	43738399	protein_coding	Slc25a28	utr3	ENSMUSG00000040414	ProperStrand	8	1	-17.4480
chr11	84255996	84256046	protein_coding	Aatf	intron	ENSMUSG00000018697	ProperStrand	10	chr13	90238598	90238688	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	1	-12.3079
chr6	97112834	97112924	snoRNA	ENSMUSG00000065728_SNORA36	.	ENSMUSG00000065728	ProperStrand	158	chr17	35089200	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-3.6398
chr10	127522554	127522614	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr6	85388874	85389658	protein_coding	Smyd5	exon	ENSMUSG00000033706	ProperStrand	107	2	-12.0273
chr9	64022856	64022924	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	chr3	68889026	68889182	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	4	-0.8226
chr2	119767365	119767382	protein_coding	Mga	exon	ENSMUSG00000033943	NonProperStrand	7	chr15	34370545	34370645	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-7.8301
chr18	5056499	5056589	protein_coding	Svil	exon	ENSMUSG00000024236	ProperStrand	19	chr16	23110459	23110539	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.5826
chr4	55431652	55431668	lincRNA	Gm12505	exon	ENSMUSG00000087070	ProperStrand	447	chr4	59771075	59771175	protein_coding	E130308A19Rik	utr3	ENSMUSG00000045071	ProperStrand	41	1	-10.0587
chr8	9972099	9972189	protein_coding	Lig4	exon	ENSMUSG00000049717	ProperStrand	14	chr7	29136525	29136599	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.0758
chr16	30600021	30600111	protein_coding	Fam43a	utr5	ENSMUSG00000046546	ProperStrand	8	chr19	8963086	8963166	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-6.1145
chr4	109608190	109608227	protein_coding	Faf1	exon	ENSMUSG00000010517	ProperStrand	29	chr5	74489610	74489676	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-5.1714
chr2	26493382	26493518	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr17	51877559	51877575	protein_coding	Satb1	utr3	ENSMUSG00000023927	ProperStrand	62	1	-6.1299
chr9	62992379	62992395	protein_coding	Skor1	exon	ENSMUSG00000022245	NonProperStrand	70	chr11	77995189	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	2	-9.5740
chr13	9833551	9833617	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr19	14636527	14636573	protein_coding	Tle4	intron	ENSMUSG00000024642	ProperStrand	23	1	-6.8488
mmu-miR-1949	3	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr11	97642951	97643091	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	9	-2.1846
chr11	119776730	119776774	protein_coding	Chmp6	utr5	ENSMUSG00000025371	ProperStrand	4	chr11	6520366	6520456	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	2	-21.8288
chr6	42543791	42543807	protein_coding	Fam115e	exon	ENSMUSG00000018656	NonProperStrand	64	chr15	79913295	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-3.4733
chr9	53382555	53382572	SINE	ID_B1	B4	chr9ID_B153382464	ProperStrand	11	chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	1	-14.8295
chr12	62013531	62013620	LINE	L1Md_F2	L1	chr12L1Md_F262011449	ProperStrand	1	chr12	62013742	62013822	LINE	L1Md_F2	L1	chr12L1Md_F262013599	ProperStrand	1	1	-inf
chr7	30236731	30236794	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	chr6	84084633	84084654	protein_coding	Dysf	intron	ENSMUSG00000033788	NonProperStrand	9	1	-12.7314
chr11	35853255	35853271	protein_coding	Odz2	exon	ENSMUSG00000049336	ProperStrand	106	chr11	62416599	62416642	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-4.0772
chr7	99449691	99449707	protein_coding	Dlg2	intron	ENSMUSG00000052572	ProperStrand	33	chr1	162968213	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-8.0119
chr7	29679096	29679149	protein_coding	Actn4	utr3	ENSMUSG00000054808	ProperStrand	120	chr9	120039533	120039622	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.1157
chr2	90235293	90235345	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	13115655	13115786	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	3	-1.1001
chr11	98856645	98856664	protein_coding	Top2a	exon	ENSMUSG00000020914	ProperStrand	324	chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	1	-5.4930
chr2	127096035	127096051	protein_coding	Stard7	utr5	ENSMUSG00000027367	ProperStrand	12	chr10	122702078	122702094	protein_coding	Fam19a2	utr5	ENSMUSG00000044071	NonProperStrand	52	1	-16.8756
chr17	35297092	35297410	protein_coding	Prrc2a	exon	ENSMUSG00000024393	ProperStrand	315	chr1	162967139	162967178	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	5	-19.0005
chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	chr7	52382234	52382275	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-3.3134
chr9	53389889	53389961	protein_coding	Acat1	utr3	ENSMUSG00000032047	ProperStrand	13	chr5	108336392	108336492	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-7.9357
chr4	133801679	133801695	lincRNA	E130218I03Rik	exon	ENSMUSG00000086322	NonProperStrand	43	chr11	116714022	116714085	protein_coding	Srsf2	exon	ENSMUSG00000034120	ProperStrand	132	1	-12.4038
chr13	49829097	49829148	protein_coding	Iars	utr3	ENSMUSG00000037851	ProperStrand	95	chr7	52381722	52381757	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	2	-10.7487
chr13	8766291	8766308	protein_coding	Adarb2	utr3	ENSMUSG00000052551	ProperStrand	292	chr3	68889026	68889232	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	2	-1.6525
chr13	111176324	111176414	LINE	Lx5	L1	chr13Lx5111175312	ProperStrand	1	chr6	90413023	90413113	protein_coding	Klf15	intron	ENSMUSG00000030087	NonProperStrand	2	1	-inf
chr2	120830013	120830038	snoRNA	ENSMUSG00000065883_U3	.	ENSMUSG00000065883	ProperStrand	6	chr5	74489542	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	6	-inf
chr14	64230571	64230671	protein_coding	Xkr6	intron	ENSMUSG00000035067	ProperStrand	10	chrX	34622968	34623021	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-6.6656
chr2	25105896	25107254	protein_coding	Ndor1	exon	ENSMUSG00000006471	NonProperStrand	84	chr9	110289366	110289388	protein_coding	Ptpn23	exon	ENSMUSG00000036057	ProperStrand	34	1	-13.7856
chr6	72583293	72583310	protein_coding	Gm15401	intron	ENSMUSG00000072999	ProperStrand	2	chr7	116664819	116664909	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-9.7350
chr11	115884559	115885778	protein_coding	H3f3b	utr5	ENSMUSG00000016559	ProperStrand	76	chr10	23505152	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-1.8620
chr8	24556822	24556878	protein_coding	Sfrp1	exon	ENSMUSG00000031548	ProperStrand	22	chr4	131908689	131908719	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.8292
chr12	78043727	78043817	protein_coding	Max	intron	ENSMUSG00000059436	ProperStrand	7	chr11	97643009	97643089	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-6.6269
chr2	74508736	74508754	protein_coding	Hoxd13	utr3	ENSMUSG00000001819	ProperStrand	2	chr7	30807799	30807882	protein_coding	Zfp568	exon	ENSMUSG00000074221	ProperStrand	110	1	-inf
chr16	72800514	72800532	protein_coding	Robo1	intron	ENSMUSG00000022883	NonProperStrand	188	chr7	150243003	150243057	protein_coding	Cd81	intron	ENSMUSG00000037706	ProperStrand	88	1	-10.2526
chr1	120734284	120734323	protein_coding	Gli2	exon	ENSMUSG00000048402	ProperStrand	148	chr2	26768053	26768119	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	5	-18.9365
chr10	126953373	126953512	protein_coding	Ndufa4l2	exon	ENSMUSG00000040280	ProperStrand	18	chr10	23505152	23505235	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.2069
chr7	116663634	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	chr13	96100557	96100694	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	20	-12.3552
chr5	112758435	112758451	protein_coding	Tfip11	exon	ENSMUSG00000029345	ProperStrand	111	chr16	23110526	23110557	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.4833
chr15	71216582	71216672	LINE	Lx6	L1	chr15Lx671216126	NonProperStrand	1	chr4	124775025	124775105	protein_coding	Meaf6	intron	ENSMUSG00000028863	NonProperStrand	4	1	-inf
chr6	92104375	92104391	protein_coding	Nr2c2	exon	ENSMUSG00000005893	ProperStrand	101	chrX	34335815	34336865	protein_coding	Slc25a5	exon	ENSMUSG00000016319	ProperStrand	55	1	-12.4429
chrX	116994377	116994457	LINE	Lx2	L1	chrXLx2116994307	NonProperStrand	1	chrX	116994122	116994212	LTR	MTA_Mm	MaLR	chrXMTA_Mm116993912	ProperStrand	1	1	-inf
chr6	112689098	112689322	protein_coding	Srgap3	exon	ENSMUSG00000030257	NonProperStrand	208	chr15	79908931	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-3.1282
chr19	9011974	9012086	protein_coding	Eml3	exon	ENSMUSG00000071647	ProperStrand	19	chr16	23110876	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-5.0037
chr17	12585979	12585995	protein_coding	Plg	exon	ENSMUSG00000059481	ProperStrand	86	chr11	6428055	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.5568
chr11	108807308	108807327	protein_coding	Axin2	exon	ENSMUSG00000000142	ProperStrand	23	chr8	32260335	32260414	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-6.5150
chr3	12664032	12664122	LTR	IAPLTR2b	ERVK	chr3IAPLTR2b12663998	ProperStrand	1	chr15	36927041	36927120	protein_coding	Zfp706	utr3	ENSMUSG00000062397	ProperStrand	6	1	-inf
chr1	12776758	12786915	protein_coding	Sulf1	exon	ENSMUSG00000016918	ProperStrand	22	chr16	23110911	23110991	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.4786
chr13	23831350	23831397	protein_coding	Hist1h1c	utr3	ENSMUSG00000036181	ProperStrand	99	chr15	34370570	34370660	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-2.6518
chr2	5486733	5486752	protein_coding	Camk1d	exon	ENSMUSG00000039145	ProperStrand	50	chr7	148634701	148634787	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-4.3314
chr15	39702975	39702991	protein_coding	Lrp12	utr3	ENSMUSG00000022305	ProperStrand	11	chr8	13416897	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-9.8943
chr4	118954767	118967098	protein_coding	Ybx1	utr5	ENSMUSG00000028639	ProperStrand	171	chr16	23110527	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-1.8192
chr17	35987436	35987489	protein_coding	Mdc1	exon	ENSMUSG00000061607	ProperStrand	85	chr11	68887040	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	3	-8.6860
chr15	58274411	58274467	protein_coding	D15Ertd621e	exon	ENSMUSG00000037119	ProperStrand	26	chr6	120467088	120468467	protein_coding	Cecr5	exon	ENSMUSG00000058979	ProperStrand	97	1	-14.0425
chr17	23955820	23955839	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	chr9	15119736	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.1991
chr8	91555869	91555885	protein_coding	Sall1	exon	ENSMUSG00000031665	ProperStrand	96	chr18	75160711	75160731	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	1	-8.2473
chr6	124811112	124811182	protein_coding	Gpr162	exon	ENSMUSG00000038390	NonProperStrand	40	chr4	131908272	131908344	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-3.7010
chr2	90235293	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	91768132	91768148	protein_coding	Chrm4	exon	ENSMUSG00000040495	NonProperStrand	55	1	-4.6294
chr11	114753110	114753126	protein_coding-noncoding	Cd300a	utr5	ENSMUSG00000034652	ProperStrand	7	chr5	143109485	143109516	protein_coding	Wipi2	intron	ENSMUSG00000029578	ProperStrand	49	1	-18.5111
chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	1	-6.0709
chr11	121360397	121365008	protein_coding	Tbcd	exon	ENSMUSG00000039230	ProperStrand	34	chr7	117189957	117190037	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.3973
chr5	136599082	136599100	protein_coding	Lrwd1	exon	ENSMUSG00000029703	ProperStrand	27	chr9	120038553	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-7.5672
chr15	76018444	76018642	protein_coding	Plec	exon	ENSMUSG00000022565	ProperStrand	186	chr11	69481335	69481378	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-1.3482
chr10	80809668	80809684	protein_coding	Hmg20b	exon	ENSMUSG00000020232	ProperStrand	157	chr9	15118244	15118322	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-1.8169
chr14	71090885	71092461	protein_coding	Xpo7	exon	ENSMUSG00000022100	ProperStrand	109	chr1	155309711	155309801	protein_coding	Dhx9	exon	ENSMUSG00000042699	ProperStrand	98	34	-inf
chr2	118864609	118864675	protein_coding	Rpusd2	utr3	ENSMUSG00000027324	ProperStrand	11	chr6	50143744	50143821	protein_coding	Mpp6	intron	ENSMUSG00000038388	ProperStrand	6	2	-19.2864
chr5	87354839	87354856	protein_coding	Ugt2b1	exon	ENSMUSG00000035836	ProperStrand	26	chr2	26493388	26493500	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-5.3491
chr17	34098092	34098172	protein_coding	Vps52	exon	ENSMUSG00000024319	ProperStrand	9	chr7	116663669	116663759	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-6.1447
chr5	143734211	143734290	protein_coding	Fscn1	utr3	ENSMUSG00000029581	ProperStrand	200	chr11	69481343	69481433	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-1.2478
chr5	109124122	109132306	protein_coding	Fgfrl1	exon	ENSMUSG00000008090	ProperStrand	111	chr16	23110827	23110915	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-0.7316
chr9	78326990	78327678	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr17	79250581	79250798	pseudogene	Gm6548	.	ENSMUSG00000091549	ProperStrand	33	24	-18.6927
chr5	31357389	31372709	protein_coding	Cad	exon	ENSMUSG00000013629	ProperStrand	260	chr7	116663634	116663734	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	4	-2.8828
chr7	30026273	30026289	protein_coding	Yif1b	intron	ENSMUSG00000030588	ProperStrand	154	chr15	79908962	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-3.6752
chr1	24621191	24621281	protein_coding	Gm10925	utr3	ENSMUSG00000090378	ProperStrand	320	chr7	117189944	117190024	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-0.7572
chr3	32613483	32613536	protein_coding	Actl6a	exon	ENSMUSG00000027671	ProperStrand	31	chr2	158185590	158185651	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-7.8044
chr10	79171447	79171464	protein_coding	Bsg	exon	ENSMUSG00000023175	NonProperStrand	3	chr12	17552960	17553016	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-11.3963
chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	chrX	101017112	101017128	protein_coding	Slc16a2	exon	ENSMUSG00000033965	ProperStrand	35	2	-20.7055
chr8	119099063	119099100	protein_coding	Cdyl2	exon	ENSMUSG00000031758	ProperStrand	35	chr8	108574353	108575745	protein_coding	Dus2l	exon	ENSMUSG00000031901	ProperStrand	7	2	-inf
chr8	71328736	71328834	protein_coding	Ints10	exon	ENSMUSG00000031864	ProperStrand	28	chr9	30957995	30958028	protein_coding	Aplp2	utr3	ENSMUSG00000031996	ProperStrand	172	1	-12.7409
chr19	7359215	7359233	protein_coding	Mark2	exon	ENSMUSG00000024969	ProperStrand	75	chr3	123210854	123210972	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-4.8811
chr17	29473235	29475730	protein_coding	Mtch1	exon	ENSMUSG00000024012	ProperStrand	13	chr17	13112504	13112528	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-7.6232
chr19	8798740	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	chr1	162966812	162966862	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	4	-0.6989
chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	chr15	79908932	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	4	-4.7304
chr16	45158621	45158637	protein_coding	Slc35a5	utr5	ENSMUSG00000022664	NonProperStrand	1	chr2	26493383	26493475	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-inf
chr17	68151736	68151753	protein_coding	Lama1	intron	ENSMUSG00000032796	ProperStrand	168	chr2	91436228	91436267	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-5.4677
chr13	98261283	98261338	lincRNA	Gm11019	intron	ENSMUSG00000078952	ProperStrand	113	chr1	180267865	180267887	protein_coding	Hnrnpu	utr5	ENSMUSG00000039630	ProperStrand	286	1	-8.9145
chr15	12763993	12764032	protein_coding	Drosha	exon	ENSMUSG00000022191	ProperStrand	163	chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	1	-7.2807
chr17	32193632	32193722	protein_coding	Rrp1b	exon	ENSMUSG00000058392	ProperStrand	38	chr6	71832604	71832684	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-6.5128
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr6	71832550	71832642	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	2	-1.2500
chr1	167783349	167783367	protein_coding	Cd247	intron	ENSMUSG00000005763	ProperStrand	10	chr4	131908752	131908808	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.3231
chr6	131330290	131330314	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	NonProperStrand	4	chr12	106269285	106269385	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	NonProperStrand	38	1	-19.4518
chr16	90386836	90386853	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	chr7	150717298	150717350	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-4.4448
chr2	167836658	167836685	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	chr12	99497602	99497618	protein_coding	Galc	utr5	ENSMUSG00000021003	NonProperStrand	65	1	-11.9715
chr3	88372122	88372172	protein_coding	Ubqln4	utr3	ENSMUSG00000008604	ProperStrand	49	chr11	68886949	68887039	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-4.5298
chr11	76594825	76594842	protein_coding	Cpd	utr3	ENSMUSG00000020841	NonProperStrand	4	chr9	70960077	70960093	protein_coding	Aqp9	exon	ENSMUSG00000032204	NonProperStrand	118	1	-17.6418
chr17	42975726	42975745	protein_coding	Cd2ap	exon	ENSMUSG00000061665	ProperStrand	44	chr12	110874223	110874290	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	3	-inf
chr6	29493280	29493319	protein_coding	Tnpo3	utr3	ENSMUSG00000012535	ProperStrand	58	chr1	88247835	88247876	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	4	-16.0090
chr5	3693225	3693241	protein_coding	Ankib1	exon	ENSMUSG00000040351	NonProperStrand	98	chr11	97642952	97643038	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.6774
chr12	87831125	87831180	protein_coding	Esrrb	intron	ENSMUSG00000021255	ProperStrand	254	chr3	133132359	133132381	protein_coding	Tet2	exon	ENSMUSG00000040943	ProperStrand	192	1	-8.0939
chr7	130306221	130306237	protein_coding	Tnrc6a	exon	ENSMUSG00000052707	ProperStrand	37	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-7.9492
chr3	136462971	136462990	protein_coding	Ppp3ca	intron	ENSMUSG00000028161	ProperStrand	45	chr2	91436261	91436336	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-8.0727
chr1	138740748	138740785	protein_coding	Nr5a2	utr3	ENSMUSG00000026398	ProperStrand	43	chr7	67125746	67125829	snoRNA	ENSMUSG00000089375_Snord107	.	ENSMUSG00000089375	ProperStrand	451	2	-15.7252
chr4	106109387	106111407	protein_coding	Usp24	exon	ENSMUSG00000028514	ProperStrand	74	chr9	64026086	64026138	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	1	-8.2597
chr5	89663839	89663855	protein_coding	Slc4a4	exon	ENSMUSG00000060961	NonProperStrand	195	chr11	62416600	62416651	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-2.9616
chr2	18095458	18095507	protein_coding	Mllt10	intron	ENSMUSG00000026743	ProperStrand	30	chr2	30043223	30043240	protein_coding	Ccbl1	exon	ENSMUSG00000039648	NonProperStrand	3	1	-inf
chr5	110954710	110954726	lincRNA	A630023P12Rik	exon	ENSMUSG00000048215	ProperStrand	2	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-10.5602
chr15	80394214	80394304	DNA	MER46C	MER2_type	chr15MER46C80394041	ProperStrand	1	chr15	80394352	80394442	SINE	B3	B2	chr15B380394334	NonProperStrand	1	1	-inf
chr14	11125608	11125625	protein_coding	Fhit	intron	ENSMUSG00000060579	NonProperStrand	51	chr11	106362639	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-7.7290
chr12	81221844	81221900	lincRNA	2310015A10Rik	exon	ENSMUSG00000085644	ProperStrand	3	chr7	26172954	26173027	protein_coding	Lipe	intron	ENSMUSG00000003123	NonProperStrand	63	1	-inf
chr4	129323653	129323751	protein_coding	Kpna6	utr3	ENSMUSG00000003731	ProperStrand	39	chr10	110918641	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-4.2557
chr15	79913288	79913321	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr3	96067076	96067176	protein_coding	Hist2h4	exon	ENSMUSG00000091405	ProperStrand	18	1	-5.9221
chr7	20222974	20223053	protein_coding	Clptm1	exon	ENSMUSG00000002981	ProperStrand	109	chr11	97642989	97643079	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-2.8398
chr17	71990921	71991000	snoRNA	ENSMUSG00000092713_CT010429.1	.	ENSMUSG00000092713	ProperStrand	182	chr3	123210854	123210912	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	4	-3.1994
chr1	88247435	88247554	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	10	-19.7265
chr11	59618059	59618149	protein_coding	Flcn	exon	ENSMUSG00000032633	ProperStrand	52	chr16	23111385	23111465	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-4.3302
chr2	166760313	166760349	protein_coding	Cse1l	exon	ENSMUSG00000002718	ProperStrand	22	chr11	116938558	116938648	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-8.1673
chr6	113284585	113284601	protein_coding	Camk1	exon	ENSMUSG00000030272	ProperStrand	13	chr1	72290908	72290987	snRNA	ENSMUSG00000093111_AC120136.1	.	ENSMUSG00000093111	ProperStrand	137	1	-14.7691
chr9	31872906	31872955	SINE	B3	B2	chr9B331872843	NonProperStrand	3	chr1	63190280	63190338	protein_coding	Ndufs1	utr3	ENSMUSG00000025968	ProperStrand	14	3	-inf
chr18	84343997	84344015	protein_coding	Zfp407	intron	ENSMUSG00000048410	ProperStrand	34	chr9	64022855	64022910	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-9.1668
chr6	122677969	122677996	protein_coding	Slc2a3	utr3	ENSMUSG00000003153	ProperStrand	682	chrX	93136011	93136027	protein_coding	Las1l	exon	ENSMUSG00000057421	ProperStrand	248	1	-5.6437
chr15	76734861	76735036	protein_coding	Rpl8	exon	ENSMUSG00000003970	ProperStrand	191	chr2	32818815	32818905	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-3.2799
chr2	173078468	173078544	protein_coding	Pmepa1	intron	ENSMUSG00000038400	ProperStrand	25	chr19	8963027	8963111	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-6.5242
chr12	92811866	92811888	protein_coding	Gtf2a1	intron	ENSMUSG00000020962	ProperStrand	61	chr2	144091830	144091922	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	ProperStrand	549	3	-18.8839
chr9	62221442	62222518	protein_coding	Anp32a	exon	ENSMUSG00000032249	ProperStrand	75	chr11	77996560	77996623	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-5.6538
chr14	98738585	98738601	LINE	L1MEf	L1	chr14L1MEf98738356	ProperStrand	8	chr8	97387568	97387637	protein_coding	Polr2c	utr3	ENSMUSG00000031783	ProperStrand	16	1	-19.1029
chr17	39985500	39985659	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr8	112363200	112363275	snoRNA	ENSMUSG00000077549_Snord71	.	ENSMUSG00000077549	ProperStrand	196	6	-19.0710
chr1	155319668	155319821	protein_coding	Dhx9	exon	ENSMUSG00000042699	ProperStrand	98	chr7	116663634	116663724	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-3.1559
chr17	8735100	8735117	protein_coding	Pde10a	intron	ENSMUSG00000023868	NonProperStrand	78	chr5	108336363	108336457	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-4.3779
chr10	85812176	85812193	protein_coding-noncoding	Syn3	utr3	ENSMUSG00000059602	ProperStrand	4	chr16	23111382	23111449	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-16.1405
chr15	77597977	77597993	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr10	45390289	45390323	protein_coding	Hace1	exon	ENSMUSG00000038822	ProperStrand	8	1	-12.9427
chr1	34489984	34490002	miRNA	Mir5103	.	ENSMUSG00000092852	NonProperStrand	24	chr4	116826700	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-8.6204
chr18	67649708	67649724	protein_coding	Spire1	utr3	ENSMUSG00000024533	NonProperStrand	6	chr16	11144201	11144301	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	2	-19.0343
chr17	36023154	36023183	protein_coding	Dhx16	exon	ENSMUSG00000024422	ProperStrand	28	chr7	118219575	118219673	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-5.6481
chr7	29243027	29243725	protein_coding	Lrfn1	utr5	ENSMUSG00000030600	ProperStrand	19	chr17	35089181	35089209	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-7.7793
chr16	35900358	35900438	SINE	B1_Mur1	Alu	chr16B1_Mur135900353	NonProperStrand	1	chr16	35900087	35900177	SINE	RSINE1	B4	chr16RSINE135900036	ProperStrand	1	1	-inf
chr5	115983444	115983460	protein_coding	Pxn	intron	ENSMUSG00000029528	ProperStrand	171	chr2	26494805	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.3932
chr5	121604294	121604333	protein_coding-noncoding	Ptpn11	utr3	ENSMUSG00000043733	ProperStrand	1	chr12	60141322	60141412	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-inf
chr5	121655016	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	chr9	120039533	120039686	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	44	-1.8925
chr4	41071198	41071259	protein_coding	Nol6	exon	ENSMUSG00000028430	ProperStrand	98	chr8	73115775	73115791	protein_coding	Ell	utr3	ENSMUSG00000070002	NonProperStrand	134	1	-10.7145
chr1	20993149	20993953	protein_coding	Tram2	exon	ENSMUSG00000041779	ProperStrand	13	chr4	131908236	131908344	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-6.9302
chr2	127630039	127647584	protein_coding	Bub1	exon	ENSMUSG00000027379	ProperStrand	26	chr3	123210858	123210983	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	6	-18.7374
chr10	24546074	24551590	protein_coding	Enpp3	exon	ENSMUSG00000019989	ProperStrand	6	chr15	79913288	79913354	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-8.2103
chr10	79223785	79224210	protein_coding	Rnf126	exon	ENSMUSG00000035890	ProperStrand	30	chr14	76247741	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-5.5134
chr10	79879961	79880064	protein_coding	Tcf3	exon	ENSMUSG00000020167	NonProperStrand	24	chr15	77356785	77356801	protein_coding	Apol7c	exon	ENSMUSG00000044309	ProperStrand	197	1	-12.7838
chrX	34667269	34667285	protein_coding	Nkap	exon	ENSMUSG00000016409	NonProperStrand	133	chr9	120039625	120039678	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.9500
chr6	120990409	120990499	protein_coding	Mical3	utr5	ENSMUSG00000003178	ProperStrand	9	chr8	32260340	32260420	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-8.4420
chr13	54653914	54653933	protein_coding	4833439L19Rik	utr3	ENSMUSG00000025871	ProperStrand	14	chr5	108334195	108334334	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	3	-17.5315
chr2	105520620	105520638	protein_coding	Pax6	intron	ENSMUSG00000027168	ProperStrand	13	chr11	62418014	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	3	-19.4185
chr19	42830071	42830089	protein_coding	Hps1	utr3	ENSMUSG00000025188	NonProperStrand	1	chr16	23111786	23111834	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-inf
chr10	121188072	121188162	protein_coding	BC048403	exon	ENSMUSG00000053684	ProperStrand	8	chr4	131908814	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.7736
chr1	74612262	74612278	protein_coding	Plcd4	intron	ENSMUSG00000026173	ProperStrand	2	chr1	9932598	9932623	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-15.1916
chr10	127522647	127523099	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr8	77742558	77742574	protein_coding	Rasd2	exon	ENSMUSG00000034472	NonProperStrand	237	1	-5.9432
chr11	120012460	120012476	lincRNA	Gm11769	exon	ENSMUSG00000085636	ProperStrand	6	chr4	131908687	131908787	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.3738
chr14	67634906	67634932	protein_coding	Ppp2r2a	utr3	ENSMUSG00000022052	ProperStrand	45	chr1	88247835	88247863	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	2	-9.2528
chr12	68768887	68768977	LINE	L1Md_F2	L1	chr12L1Md_F268768613	ProperStrand	13	chr5	40272856	40272936	LINE	L1Md_F2	L1	chr5L1Md_F240272603	ProperStrand	1	1	-inf
chr2	160721184	160721200	protein_coding	Lpin3	exon	ENSMUSG00000027412	ProperStrand	31	chr1	162967489	162967524	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.7242
chr5	135096024	135096081	protein_coding	Eif4h	utr3	ENSMUSG00000040731	ProperStrand	46	chr11	58889820	58889836	protein_coding	Obscn	exon	ENSMUSG00000061462	ProperStrand	81	1	-13.2472
chr10	7383389	7383405	protein_coding	Pcmt1	utr5	ENSMUSG00000019795	ProperStrand	55	chr11	106362637	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	2	-12.1395
chr3	90291593	90291630	protein_coding	Ilf2	utr3	ENSMUSG00000001016	ProperStrand	28	chr10	40079395	40079412	protein_coding	Cdk19	intron	ENSMUSG00000038481	ProperStrand	34	1	-15.9578
chr5	100855902	100855941	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr7	133938857	133938957	protein_coding	Aldoa	utr3	ENSMUSG00000030695	ProperStrand	721	1	-2.0240
chr17	26068019	26068086	protein_coding-noncoding	Pigq	utr3	ENSMUSG00000025728	ProperStrand	1	chr3	85942713	85942730	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	1	-inf
chr17	46814084	46814100	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr15	76734867	76735006	protein_coding	Rpl8	exon	ENSMUSG00000003970	ProperStrand	191	1	-6.9238
chr8	126026045	126026061	protein_coding	Afg3l1	utr3	ENSMUSG00000031967	ProperStrand	29	chr19	8963092	8963174	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-6.0882
chr2	139519127	139519144	protein_coding	Ism1	intron	ENSMUSG00000074766	NonProperStrand	10	chr4	131908697	131908750	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.3231
chr2	29736240	29736508	protein_coding	Cercam	exon	ENSMUSG00000039787	ProperStrand	4	chr19	8800099	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-13.2725
chr7	84650876	84650894	LINE	Lx7	L1	chr7Lx784650679	NonProperStrand	1	chr1	192769346	192769478	protein_coding	Angel2	utr3	ENSMUSG00000026634	NonProperStrand	2	1	-inf
chr3	132420004	132420024	protein_coding	Tbck	intron	ENSMUSG00000028030	ProperStrand	11	chr4	106596711	106596778	protein_coding	Ssbp3	intron	ENSMUSG00000061887	ProperStrand	36	1	-17.6059
chr15	36528776	36538252	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr11	68887037	68887065	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	3	-1.1148
chrX	91435710	91435731	protein_coding	Eif2s3x	utr3	ENSMUSG00000035150	ProperStrand	55	chr9	15118276	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.6272
chr3	100743647	100743672	protein_coding	Ttf2	utr3	ENSMUSG00000033222	ProperStrand	50	chr7	116663634	116663724	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	7	-19.1853
chr1	88252999	88253158	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chr10	90581050	90581140	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	14	-15.7774
chr13	112278554	112278570	protein_coding	Gpbp1	utr5	ENSMUSG00000032745	ProperStrand	85	chr11	62416600	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-4.4954
chr7	4436824	4436888	protein_coding	Ppp1r12c	exon	ENSMUSG00000019254	ProperStrand	15	chr1	89673517	89673549	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-5.9364
chr13	38064360	38064376	protein_coding	Ssr1	utr3	ENSMUSG00000021427	ProperStrand	65	chr18	12172461	12172477	protein_coding	6030446N20Rik	intron	ENSMUSG00000049411	ProperStrand	235	1	-10.4148
chr19	44188393	44188473	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr4	116862573	116862663	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	5	-14.6424
chr5	33462187	33462206	protein_coding	Slc5a1	intron	ENSMUSG00000011034	NonProperStrand	2	chr7	127785248	127786623	protein_coding	Uqcrc2	exon	ENSMUSG00000030884	ProperStrand	26	1	-inf
chr2	57209041	57210087	protein_coding	Gpd2	exon	ENSMUSG00000026827	ProperStrand	93	chr10	23505152	23505206	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-2.4533
chr14	61929495	61929512	protein_coding	Arl11	utr5	ENSMUSG00000043157	ProperStrand	37	chr9	120037980	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	2	-9.2429
chr1	173341933	173341949	protein_coding	Usf1	utr5	ENSMUSG00000026641	NonProperStrand	144	chr15	79912106	79912135	protein_coding	Rpl3	exon	ENSMUSG00000060036	ProperStrand	8342	1	-2.0627
chr7	82673037	82673124	protein_coding	Akap13	intron	ENSMUSG00000066406	ProperStrand	80	chr18	35716764	35716854	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.7116
chr15	102043247	102043263	protein_coding	Zfp740	utr3	ENSMUSG00000046897	ProperStrand	34	chr2	63936035	63936053	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-9.0018
mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	19	-5.1202
chrX	34622959	34623023	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	chr2	144091716	144091744	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	ProperStrand	549	3	-1.0654
chr6	90420520	90420560	protein_coding	Klf15	intron	ENSMUSG00000030087	ProperStrand	9	chr3	123210854	123210907	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.6210
chr9	120040179	120040279	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	chr8	125626933	125627005	snoRNA	ENSMUSG00000064450_Snord68	.	ENSMUSG00000064450	ProperStrand	181	1	-7.3204
chr8	72588800	72588842	protein_coding	Sugp1	exon	ENSMUSG00000011306	ProperStrand	20	chr5	121655034	121655148	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	3	-13.7179
chr8	13416894	13416910	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr9	110802127	110802183	protein_coding	Als2cl	utr3	ENSMUSG00000044037	ProperStrand	10	1	-10.0944
chr7	29171541	29171558	protein_coding	Med29	utr3	ENSMUSG00000003444	NonProperStrand	134	chr12	55835614	55835704	snRNA	ENSMUSG00000075960_U1	.	ENSMUSG00000075960	ProperStrand	210	4	-inf
chr18	65829074	65829093	protein_coding	Zfp532	intron	ENSMUSG00000042439	NonProperStrand	8	chr10	23505559	23505621	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-11.6770
chr7	51505506	51505596	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	chr18	35714148	35714286	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	11	-10.6664
chr4	43505806	43505896	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr15	76721156	76721236	protein_coding	Zfp7	exon	ENSMUSG00000033669	ProperStrand	15	1	-5.7264
chr14	21585211	21585406	protein_coding	Camk2g	exon	ENSMUSG00000021820	ProperStrand	24	chr4	131908689	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-12.5699
chr15	97965400	97965477	protein_coding	Asb8	utr3	ENSMUSG00000048175	ProperStrand	6	chr4	131865376	131865466	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-8.6503
chr9	57810406	57810432	protein_coding	Sema7a	utr3	ENSMUSG00000038264	ProperStrand	43	chr17	36000485	36000501	protein_coding	Nrm	exon	ENSMUSG00000059791	ProperStrand	253	1	-11.1000
chr16	72800514	72800532	protein_coding	Robo1	intron	ENSMUSG00000022883	NonProperStrand	188	chr16	20684311	20684384	snoRNA	ENSMUSG00000077239_Snord66	.	ENSMUSG00000077239	ProperStrand	159	1	-9.0690
chr19	56552982	56553001	protein_coding	9930023K05Rik	exon	ENSMUSG00000035818	NonProperStrand	9	chr2	26767772	26767807	snoRNA	ENSMUSG00000064829_SNORD36	.	ENSMUSG00000064829	ProperStrand	98	2	-19.4956
chr19	5769893	5769940	protein_coding	Scyl1	intron	ENSMUSG00000024941	ProperStrand	59	chr9	109934677	109936927	protein_coding	Mtap4	exon	ENSMUSG00000032479	ProperStrand	188	11	-19.8096
chr9	31318189	31318206	SINE	RSINE1	B4	chr9RSINE131318193	ProperStrand	1	mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	1	-inf
chr15	82725612	82725637	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	chr12	58362900	58362996	protein_coding	Mipol1	intron	ENSMUSG00000047022	ProperStrand	40	3	-20.1180
chr5	37187663	37187753	protein_coding	Mrfap1	exon	ENSMUSG00000055302	ProperStrand	62	chr13	49779668	49779748	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-6.9483
chr9	99483993	99484009	protein_coding	Dbr1	exon	ENSMUSG00000032469	ProperStrand	162	chr5	121655100	121655154	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.0085
chr1	63203596	63203701	lincRNA	Gm11602	exon	ENSMUSG00000084799	ProperStrand	22	chr9	64024941	64024972	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	1	-11.1718
chr5	114587218	114587292	protein_coding	Ung	exon	ENSMUSG00000029591	ProperStrand	20	chr10	23505579	23505626	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-9.7671
chr8	98394818	98395883	protein_coding	Got2	exon	ENSMUSG00000031672	ProperStrand	85	chr4	131865913	131865979	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.2579
chr15	16258865	16258955	LINE	L1Md_F2	L1	chr15L1Md_F216258759	ProperStrand	1	chr15	16259053	16259143	LTR	RMER6C	ERVK	chr15RMER6C16258950	ProperStrand	1	1	-inf
chr2	26493407	26493518	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chrX	130496426	130496668	protein_coding	Sytl4	exon	ENSMUSG00000031255	ProperStrand	169	1	-4.1915
chr1	174102545	174102582	protein_coding	Dcaf8	exon	ENSMUSG00000026554	ProperStrand	35	chr10	79520399	79520416	protein_coding	Sbno2	exon	ENSMUSG00000035673	NonProperStrand	11	1	-17.7285
chr19	9047566	9051875	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	chr7	117189957	117190015	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	6	-5.3598
chr7	106372065	106372082	protein_coding	Mogat2	exon	ENSMUSG00000052396	ProperStrand	4	chr1	162967735	162967772	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	1	-15.9496
chr12	3835150	3835250	protein_coding	Dnmt3a	utr5	ENSMUSG00000020661	ProperStrand	40	chr1	162965557	162965598	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.0291
chr4	43505792	43505872	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr3	116496543	116496633	protein_coding	Agl	exon	ENSMUSG00000033400	ProperStrand	18	1	-5.3613
chr2	154343463	154343553	protein_coding	Cbfa2t2	exon	ENSMUSG00000038533	ProperStrand	99	chr1	137299963	137300810	protein_coding	Ipo9	exon	ENSMUSG00000041879	ProperStrand	53	1	-12.5581
chr2	130109497	130109513	protein_coding	Idh3b	exon	ENSMUSG00000027406	ProperStrand	146	chr2	151368332	151368397	protein_coding	Fkbp1a	utr5	ENSMUSG00000032966	ProperStrand	36	1	-12.5609
mmu-miR-290a-5p	0	22	miRNA	mmu-miR-290a-5p	.	mmu-miR-290a-5p	ProperStrand	22	chr9	57681884	57681972	protein_coding	Arid3b	utr5	ENSMUSG00000004661	ProperStrand	39	3	-19.6981
chr11	29642059	29642099	protein_coding	Rtn4	utr3	ENSMUSG00000020458	ProperStrand	117	chr9	106332249	106332304	protein_coding	Rpl29	utr5	ENSMUSG00000048758	ProperStrand	45	2	-18.8629
chr7	57072478	57072509	protein_coding	Prmt3	intron	ENSMUSG00000030505	ProperStrand	89	chr9	15119350	15119425	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	3	-10.4502
chr10	90432659	90432680	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	chr5	14252800	14252816	protein_coding	Sema3e	utr3	ENSMUSG00000063531	ProperStrand	125	1	-9.1472
chr6	86260109	86260199	LTR	RMER5	ERV1	chr6RMER586259991	ProperStrand	1	chr6	86260553	86260643	SINE	B3	B2	chr6B386260561	ProperStrand	1	1	-inf
chr9	78023113	78023213	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr6	55027623	55027644	protein_coding	Gars	exon	ENSMUSG00000029777	ProperStrand	71	3	-12.8970
chr1	63260755	63260771	protein_coding	Gpr1	utr5	ENSMUSG00000046856	NonProperStrand	32	chr19	8963086	8963165	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	4	-11.5173
chr10	68578218	68578237	LTR	MT2A	ERVL	chr10MT2A68577899	ProperStrand	21	chr19	44188368	44188434	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	1	-9.9141
chr14	80262508	80262525	lincRNA	Gm6999	intron	ENSMUSG00000075495	ProperStrand	265	chr3	68889024	68889221	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	3	-3.0102
chr5	74489201	74489324	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr11	117583738	117583754	protein_coding	Tnrc6c	exon	ENSMUSG00000025571	ProperStrand	51	1	-5.9411
chr8	98269996	98270076	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	chr11	6520324	6520414	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	1	-0.8057
chr5	76728832	76728848	protein_coding	Clock	intron	ENSMUSG00000029238	NonProperStrand	64	chr4	32837239	32837267	protein_coding	Mdn1	exon	ENSMUSG00000058006	ProperStrand	184	1	-10.9356
chr6	66486024	66486063	protein_coding	Mad2l1	exon	ENSMUSG00000029910	ProperStrand	7	chr7	118219574	118219686	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-13.7494
chr5	139717321	139717426	protein_coding	Sun1	exon	ENSMUSG00000036817	ProperStrand	108	chr4	154624313	154624334	protein_coding	2610002J02Rik	utr5	ENSMUSG00000073684	ProperStrand	18	2	-19.5304
chr5	108334194	108336490	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	chr5	108334251	108336495	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	29	-16.6850
chr7	132790072	132790107	protein_coding	Gtf3c1	exon	ENSMUSG00000032777	ProperStrand	161	chr18	73693170	73693190	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-3.6420
chr7	4094227	4094494	protein_coding	Leng8	exon	ENSMUSG00000035545	ProperStrand	49	chr7	116663666	116663756	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.8648
chr6	122406656	122409121	protein_coding	Rimklb	exon	ENSMUSG00000040649	ProperStrand	11	chr18	35714145	35714254	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	5	-20.1289
chr6	115742094	115742110	protein_coding	Cand2	exon	ENSMUSG00000030319	NonProperStrand	21	chr5	108336363	108336408	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-6.9568
chr11	80965641	80965658	protein_coding	Accn1	exon	ENSMUSG00000020704	NonProperStrand	228	chr3	88497879	88497979	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-4.8417
chr2	10229424	10229443	SINE	ID_B1	B4	chr2ID_B110229254	ProperStrand	1	chr16	91227718	91227735	protein_coding	Olig2	utr3	ENSMUSG00000039830	NonProperStrand	78	1	-inf
chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	chr19	8799599	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-2.9236
chr3	41371872	41371897	protein_coding	Phf17	intron	ENSMUSG00000025764	ProperStrand	101	chr1	40053934	40053951	protein_coding	Map4k4	exon	ENSMUSG00000026074	ProperStrand	348	1	-8.7479
chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr5	89663839	89663855	protein_coding	Slc4a4	exon	ENSMUSG00000060961	NonProperStrand	195	1	-1.5912
chr5	112865460	112865476	protein_coding	Sez6l	exon	ENSMUSG00000058153	ProperStrand	81	chr7	29136535	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	4	-7.2773
chr6	70794802	70794819	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chr17	62956666	62956683	protein_coding	Efna5	utr3	ENSMUSG00000048915	NonProperStrand	32	1	-12.6913
chr8	87368826	87369822	protein_coding	Calr	exon	ENSMUSG00000003814	ProperStrand	232	chr18	35716808	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	9	-9.1876
chr7	30026273	30026289	protein_coding	Yif1b	intron	ENSMUSG00000030588	ProperStrand	154	chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	1	-8.7307
mmu-miR-6991-3p	0	22	miRNA	mmu-miR-6991-3p	.	mmu-miR-6991-3p	NonProperStrand	1	chr10	85456343	85456359	protein_coding	Bpifc	intron	ENSMUSG00000050108	ProperStrand	17	1	-inf
chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	chr10	117879807	117879823	protein_coding	Ifng	exon	ENSMUSG00000055170	ProperStrand	1	1	-inf
chr9	106335899	106335942	protein_coding	Acy1	exon	ENSMUSG00000023262	ProperStrand	9	chr2	130102054	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-9.1946
chr6	30698149	30698174	protein_coding	Mest	utr3	ENSMUSG00000051855	ProperStrand	11	chr4	131866236	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-11.3981
chr7	16524111	16524181	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	chr5	74489585	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-0.8974
chr18	82662186	82662202	protein_coding	Mbp	intron	ENSMUSG00000041607	NonProperStrand	185	chr11	62418037	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	2	-5.8195
chr2	4544718	4544734	protein_coding	Prpf18	utr3	ENSMUSG00000039449	NonProperStrand	66	chr9	64022856	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-7.8349
chrX	84483692	84483720	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	ProperStrand	18	chr7	52382152	52382429	protein_coding	Rpl13a	exon	ENSMUSG00000074129	NonProperStrand	3	1	-inf
chr13	97930113	97931046	protein_coding	Gfm2	exon	ENSMUSG00000021666	ProperStrand	26	chr4	131865913	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-8.1659
chr14	52697174	52700963	protein_coding	Hnrnpc	exon	ENSMUSG00000060373	ProperStrand	75	chr2	158205317	158205361	snoRNA	ENSMUSG00000064585_SNORA71	.	ENSMUSG00000064585	ProperStrand	418	1	-8.9783
chr2	155836989	155837093	protein_coding	Ergic3	exon	ENSMUSG00000005881	ProperStrand	15	chr11	69483231	69483268	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-5.0353
chr17	45704140	45704157	protein_coding	Slc35b2	exon	ENSMUSG00000037089	ProperStrand	55	chr11	69483136	69483279	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-4.5688
chr9	57613510	57613562	protein_coding	Clk3	utr5	ENSMUSG00000032316	NonProperStrand	15	chr5	111121087	111121187	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	NonProperStrand	8	2	-21.0509
chr11	4720305	4720395	protein_coding	Nf2	intron	ENSMUSG00000009073	ProperStrand	72	chr14	76372347	76372427	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	1	-8.6254
chr8	72287172	72287188	protein_coding	Zfp866	utr3	ENSMUSG00000043090	NonProperStrand	134	chr17	24856620	24856696	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-4.8585
chr1	74350731	74350749	protein_coding	Pnkd	intron	ENSMUSG00000026179	ProperStrand	22	chr2	130101985	130102016	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-7.3504
chr11	98111136	98111210	protein_coding	Cdk12	exon	ENSMUSG00000003119	ProperStrand	50	chr5	130295464	130295550	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	10	-19.7358
chr8	82163570	82163670	protein_coding	Otud4	utr5	ENSMUSG00000036990	ProperStrand	45	chr5	135529857	135529901	snoRNA	ENSMUSG00000088008_SCARNA20	.	ENSMUSG00000088008	ProperStrand	139	1	-12.2062
chr15	79913289	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr16	20684311	20684386	snoRNA	ENSMUSG00000077239_Snord66	.	ENSMUSG00000077239	ProperStrand	159	1	-1.9044
chr14	51427121	51427221	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr11	55296311	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-0.8873
chr17	35822057	35822257	protein_coding	Ddr1	exon	ENSMUSG00000003534	ProperStrand	129	chr7	117189961	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	3	-5.5198
chr10	24503897	24503916	protein_coding	Enpp3	intron	ENSMUSG00000019989	ProperStrand	6	chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-11.1899
chr11	106684003	106684019	protein_coding	Smurf2	exon	ENSMUSG00000018363	ProperStrand	79	chr17	66274604	66274640	protein_coding	Twsg1	utr3	ENSMUSG00000024098	ProperStrand	22	1	-14.7964
chr12	52989894	52989949	protein_coding	Heatr5a	exon	ENSMUSG00000035181	ProperStrand	21	chr5	111121066	111121098	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	2	-13.6331
chr11	75569080	75578948	protein_coding	Ywhae	utr3	ENSMUSG00000020849	ProperStrand	176	chr4	131865856	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-1.7360
chr2	130101266	130101310	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	chr5	23358027	23358098	snoRNA	ENSMUSG00000093321_Snord93	.	ENSMUSG00000093321	ProperStrand	218	3	-9.8933
chr10	66473679	66473759	LINE	L1Md_F3	L1	chr10L1Md_F366473673	NonProperStrand	3	chr1	45069774	45069864	LINE	L1Md_F2	L1	chr1L1Md_F245069202	NonProperStrand	2	1	-inf
chr11	116016097	116016113	protein_coding	Fbf1	exon	ENSMUSG00000020776	NonProperStrand	36	chr14	31952187	31952235	protein_coding	Nt5dc2	utr3	ENSMUSG00000071547	ProperStrand	22	1	-16.3751
chr9	106353725	106353742	protein_coding	Abhd14b	exon	ENSMUSG00000042073	ProperStrand	2	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-12.6199
chr12	110884117	110884166	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chrX	93136011	93136027	protein_coding	Las1l	exon	ENSMUSG00000057421	ProperStrand	248	1	-5.8546
chr1	36136350	36136416	protein_coding	Hs6st1	intron	ENSMUSG00000045216	ProperStrand	63	chr7	116663676	116663736	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.4284
chr2	97818106	97818123	LTR	MTE2a	MaLR	chr2MTE2a97818097	ProperStrand	24	chr15	102034389	102034410	protein_coding	Zfp740	intron	ENSMUSG00000046897	NonProperStrand	4	1	-inf
chr11	78214290	78214306	antisense	Gm11194	.	ENSMUSG00000085747	ProperStrand	35	chrX	138159145	138159161	protein_coding	Irs4	exon	ENSMUSG00000054667	NonProperStrand	98	1	-13.4173
chr2	90235286	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr12	85912590	85917230	protein_coding	Vsx2	exon	ENSMUSG00000021239	ProperStrand	26	1	-6.0972
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr1	137662745	137662835	protein_coding	Phlda3	utr5	ENSMUSG00000041801	ProperStrand	8	3	-18.7370
chr7	53089954	53089976	protein_coding	Grin2d	intron	ENSMUSG00000002771	NonProperStrand	31	chr6	83111671	83111687	protein_coding	1700003E16Rik	exon	ENSMUSG00000030030	ProperStrand	352	1	-11.1016
chr6	112566585	112566675	LTR	ORR1A0-int	MaLR	chr6ORR1A0-int112565926	ProperStrand	1	chr5	124791581	124791661	protein_coding	2810006K23Rik	utr3	ENSMUSG00000047635	ProperStrand	1	1	-inf
chr10	41651961	41651978	protein_coding	Armc2	intron	ENSMUSG00000071324	ProperStrand	281	chr15	82980136	82980188	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-4.1369
chr4	131908372	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	chr13	22107658	22107674	tRNA	tRNA974-ValAAC	.	58480	ProperStrand	28	3	-6.9985
chr17	24858594	24858652	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	7	-3.8329
chr18	35413347	35413452	protein_coding	Ctnna1	exon	ENSMUSG00000037815	ProperStrand	115	chr1	162966022	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-4.3154
chr4	131825994	131826094	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	chr17	24856619	24856684	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-2.5780
chr10	18393547	18393563	protein_coding	D10Bwg1379e	intron	ENSMUSG00000019852	NonProperStrand	120	chr11	54679999	54680045	protein_coding	Hint1	exon	ENSMUSG00000020267	ProperStrand	11	1	-15.3860
chr12	8771559	8771591	LTR	ORR1E	MaLR	chr12ORR1E8771429	NonProperStrand	3	chr1	162967533	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	3	-inf
chr7	13516163	13516207	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr8	72431843	72431870	protein_coding	Gatad2a	utr3	ENSMUSG00000036180	ProperStrand	112	1	-7.4211
chr13	104840853	104840869	protein_coding	Nln	exon	ENSMUSG00000021710	ProperStrand	47	chr8	73419736	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.5766
chr9	65127126	65127142	protein_coding	Cilp	exon	ENSMUSG00000042254	ProperStrand	212	chr8	113362483	113362515	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	1	-6.7524
chr6	66968714	66968764	protein_coding	Gng12	utr3	ENSMUSG00000036402	ProperStrand	6	chr11	62416576	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-9.8702
chr16	16890205	16890285	protein_coding	Top3b	exon	ENSMUSG00000022779	ProperStrand	36	chr7	116663634	116663724	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.4225
chr10	66688640	66688730	protein_coding	Jmjd1c	exon	ENSMUSG00000037876	ProperStrand	110	chr11	97642958	97643038	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	5	-8.1636
chr5	28664238	28664256	protein_coding	Rbm33	intron	ENSMUSG00000048271	NonProperStrand	8	chr16	38158105	38158226	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	4	-19.3642
chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	chr9	64022855	64022878	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	2	-6.5414
chr9	58005602	58005619	protein_coding	Islr	exon	ENSMUSG00000037206	NonProperStrand	11	chr7	20177361	20177381	protein_coding	Clasrp	exon	ENSMUSG00000061028	ProperStrand	11	1	-19.3304
chr15	85411909	85411925	protein_coding	Wnt7b	utr5	ENSMUSG00000022382	ProperStrand	21	chr2	3336354	3336371	protein_coding	Meig1	utr5	ENSMUSG00000026650	ProperStrand	18	1	-17.8447
chr5	104276116	104276752	protein_coding	Aff1	exon	ENSMUSG00000029313	ProperStrand	82	chr7	116664793	116664921	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.0275
chr7	119253511	119253611	protein_coding	Usp47	exon	ENSMUSG00000059263	ProperStrand	40	chr2	91436309	91436336	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-8.3093
chr2	51534927	51534945	lincRNA	Gm13490	intron	ENSMUSG00000085014	ProperStrand	5	chr9	56106498	56106530	protein_coding	C230081A13Rik	exon	ENSMUSG00000074305	ProperStrand	40	1	-19.0790
chr6	87769189	87769558	protein_coding	Isy1	exon	ENSMUSG00000030056	ProperStrand	172	chr9	120039545	120039623	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.5551
chr19	36949807	36966268	protein_coding	Tnks2	utr3	ENSMUSG00000024811	ProperStrand	133	chr16	23111755	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-1.6417
chr2	41199972	41199989	protein_coding	Lrp1b	exon	ENSMUSG00000049252	ProperStrand	376	chr10	127508812	127508892	protein_coding	Ptges3	intron	ENSMUSG00000071072	ProperStrand	89	1	-8.8467
chrX	160631129	160631146	protein_coding	Bmx	utr3	ENSMUSG00000031377	ProperStrand	1	chr13	23654185	23654234	protein_coding	Hist1h3e	exon	ENSMUSG00000069273	ProperStrand	30	1	-inf
chr1	178754159	178754175	protein_coding	Sdccag8	intron	ENSMUSG00000026504	ProperStrand	54	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-10.9755
chr18	63238393	63238409	protein_coding	Fam38b	exon	ENSMUSG00000041482	NonProperStrand	50	chrX	34622906	34623018	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-3.5040
chr10	21716436	21716815	protein_coding	Sgk1	exon	ENSMUSG00000019970	ProperStrand	55	chr16	23111371	23111435	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-4.1403
chr2	121116461	121124336	protein_coding	Mtap1a	exon	ENSMUSG00000027254	ProperStrand	17	chr7	117189989	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-5.7589
chr3	65191723	65195262	protein_coding	Ssr3	exon	ENSMUSG00000027828	ProperStrand	24	chr9	15119968	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-9.0961
chr9	103238229	103238406	protein_coding	Topbp1	exon	ENSMUSG00000032555	ProperStrand	81	chr16	23111414	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.8748
chr1	190202943	190202959	protein_coding	Ush2a	exon	ENSMUSG00000026609	ProperStrand	24	chr15	98350203	98350270	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	2	-10.6499
chr3	55772264	55787679	protein_coding	Nbea	utr5	ENSMUSG00000027799	ProperStrand	53	chrX	156566452	156567404	protein_coding	Pdha1	exon	ENSMUSG00000031299	ProperStrand	27	1	-15.1732
chr3	58265003	58265030	protein_coding	Tsc22d2	utr3	ENSMUSG00000027806	ProperStrand	7	chr17	13112450	13112528	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-8.9252
chr2	167836656	167836680	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	chr9	119664282	119664299	protein_coding	Scn11a	exon	ENSMUSG00000034115	ProperStrand	55	1	-12.3080
chr16	35801655	35801671	protein_coding	Hspbap1	exon	ENSMUSG00000022849	ProperStrand	48	chr18	73693171	73693190	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-5.9623
chr8	125600224	125600245	protein_coding	Spg7	intron	ENSMUSG00000000738	ProperStrand	40	chr7	116663658	116663758	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.2294
chr4	43505782	43505872	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr1	162967735	162967806	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	1	-0.7556
chr4	155013993	155014898	protein_coding	Cdk11b	exon	ENSMUSG00000029062	ProperStrand	92	chr1	162968216	162968264	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-5.9728
chr13	9833552	9833661	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr18	73693165	73693189	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	7	-1.2287
chr8	95355006	95355022	protein_coding	Mmp2	intron	ENSMUSG00000031740	ProperStrand	42	chr4	116862584	116862662	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	1	-9.5603
chr4	133801679	133801695	lincRNA	E130218I03Rik	exon	ENSMUSG00000086322	NonProperStrand	43	chr15	79908930	79908989	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-6.1277
chr16	55970236	55970270	protein_coding	Rpl24	exon	ENSMUSG00000022601	ProperStrand	149	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	2	-6.8867
chr6	88834445	88834488	protein_coding	Mcm2	exon	ENSMUSG00000002870	ProperStrand	83	chr17	45705344	45705444	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	1	-6.0890
chr5	23031348	23031364	protein_coding	Srpk2	exon	ENSMUSG00000062604	ProperStrand	51	chr17	13112528	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-4.8928
chr17	56941690	56941707	protein_coding	Rfx2	intron	ENSMUSG00000024206	ProperStrand	32	chr8	87573964	87574032	protein_coding	Tnpo2	exon	ENSMUSG00000031691	ProperStrand	92	1	-13.7255
chrX	71267911	71267934	protein_coding	Irak1	exon	ENSMUSG00000031392	ProperStrand	12	chr8	128553527	128553662	protein_coding	Kcnk1	utr3	ENSMUSG00000033998	ProperStrand	16	1	-19.5274
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr7	134110716	134111233	protein_coding	Sez6l2	exon	ENSMUSG00000030683	ProperStrand	94	1	-7.8187
chr2	66453175	66453191	protein_coding	Scn9a	intron	ENSMUSG00000075316	NonProperStrand	4	chr1	162965531	162965584	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-8.7752
chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr15	72934838	72934865	protein_coding	Eif2c2	utr3	ENSMUSG00000036698	ProperStrand	154	1	-4.6184
chr5	143666278	143666328	protein_coding	Actb	exon	ENSMUSG00000029580	ProperStrand	446	chr9	110544350	110544366	protein_coding	Nbeal2	exon	ENSMUSG00000056724	ProperStrand	161	1	-7.3272
chr7	130363535	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	chr16	17891301	17891318	protein_coding	Gm20518	intron	ENSMUSG00000092470	ProperStrand	14	1	-15.5325
chr3	37380233	37380254	protein_coding	Spata5	intron	ENSMUSG00000027722	ProperStrand	13	chr7	29136543	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-8.6857
chr9	15119289	15119389	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	chr2	166890502	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	5	-3.9972
chr4	137127240	137127257	protein_coding	Ldlrad2	utr3	ENSMUSG00000070666	ProperStrand	1	chr17	24857721	24857811	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-inf
mmu-miR-6240	3	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr4	116862549	116862662	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	3	-5.1039
chr17	5411389	5411448	protein_coding	5730437N04Rik	exon	ENSMUSG00000004945	ProperStrand	4	chr11	77995191	77995255	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-11.8288
chr4	139482849	139482865	lincRNA	4933427I22Rik	exon	ENSMUSG00000085928	ProperStrand	62	chr1	162967489	162967515	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-3.4142
chr14	99491912	99491954	protein_coding	Dis3	intron	ENSMUSG00000033166	ProperStrand	17	chr1	162967516	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-5.9112
chr16	23110984	23111010	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr19	7557559	7557647	protein_coding	Rtn3	utr5	ENSMUSG00000024758	ProperStrand	35	1	-10.0996
chr2	166889030	166889056	snoRNA	ENSMUSG00000077515_SNORD12	.	ENSMUSG00000077515	ProperStrand	191	chr3	108357419	108357530	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-2.4320
chr2	94141139	94141180	protein_coding	Ttc17	utr3	ENSMUSG00000027194	ProperStrand	13	chr2	91771603	91771797	protein_coding	Mdk	utr5	ENSMUSG00000027239	ProperStrand	56	1	-16.5656
chr6	91019157	91019210	protein_coding	Nup210	exon	ENSMUSG00000030091	ProperStrand	140	chr5	108336404	108336495	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-3.2898
chr11	6024184	6024284	protein_coding-noncoding	Nudcd3	utr3	ENSMUSG00000053838	ProperStrand	1	chr11	97698915	97698955	protein_coding	Lasp1	utr3	ENSMUSG00000038366	ProperStrand	65	1	-inf
chr2	105012751	105012769	protein_coding	Wt1	utr3	ENSMUSG00000016458	NonProperStrand	338	chr15	82980090	82980224	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-3.7922
chr4	153333875	153333892	protein_coding	A430005L14Rik	exon	ENSMUSG00000047613	NonProperStrand	17	chr1	194571819	194571880	snRNA	ENSMUSG00000064881_U5	.	ENSMUSG00000064881	ProperStrand	187	2	-inf
chr5	112730521	112730601	protein_coding	Tpst2	intron	ENSMUSG00000029344	ProperStrand	34	chr6	87879895	87879985	protein_coding	8430410A17Rik	intron	ENSMUSG00000030060	ProperStrand	22	1	-16.4612
chr4	137098483	137098674	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	chr2	158185530	158185566	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	4	-6.7554
chr14	19069711	19069747	protein_coding	Nr1d2	intron	ENSMUSG00000021775	ProperStrand	33	chr12	112779243	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-5.9449
chr17	47738368	47738442	protein_coding	Bysl	utr3	ENSMUSG00000023988	ProperStrand	48	chr11	69483197	69483237	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	5	-12.8271
chr2	53051261	53051333	protein_coding	Arl6ip6	exon	ENSMUSG00000026960	NonProperStrand	1	chr9	118584070	118584134	protein_coding	Itga9	intron	ENSMUSG00000039115	ProperStrand	27	1	-inf
chr6	87683235	87683253	protein_coding-noncoding	Ccdc48	utr5	ENSMUSG00000068263	ProperStrand	3	chr10	42253046	42254488	protein_coding	Snx3	exon	ENSMUSG00000019804	ProperStrand	19	1	-inf
chr11	100414998	100415014	protein_coding	Ttc25	exon	ENSMUSG00000006784	NonProperStrand	119	chr11	62416951	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-4.7114
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr3	96364193	96364212	protein_coding	Txnip	exon	ENSMUSG00000038393	ProperStrand	172	1	-5.8901
chr5	93603047	93603137	protein_coding	Sept11	utr3	ENSMUSG00000058013	ProperStrand	79	chr18	35714156	35714236	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-2.9460
chr10	110381279	110381335	protein_coding	Zdhhc17	utr3	ENSMUSG00000035798	ProperStrand	11	chr14	47892554	47892789	protein_coding	Wdhd1	exon	ENSMUSG00000037572	ProperStrand	35	2	-21.5016
chr11	68886962	68887042	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	chr4	132394296	132394386	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	1	-0.7879
chr14	51427155	51427246	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr5	23940662	23940678	protein_coding	Slc4a2	exon	ENSMUSG00000028962	NonProperStrand	4	1	-12.8724
chr2	90235298	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr13	97050603	97050620	SINE	B4A	B4	chr13B4A97050317	ProperStrand	12	1	-7.6663
chr3	88603788	88603878	pseudogene	5830417I10Rik	.	ENSMUSG00000078684	ProperStrand	68	chr1	162965980	162966025	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-3.3732
chr7	135690227	135690274	protein_coding	Bag3	utr3	ENSMUSG00000030847	ProperStrand	35	chr16	23110964	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.7567
chr7	139938450	139938507	protein_coding	Fam53b	intron	ENSMUSG00000030956	ProperStrand	8	chr10	23505547	23505602	protein_coding	Rps12	intron	ENSMUSG00000061983	ProperStrand	309	4	-22.2300
chr6	93127321	93127338	lincRNA	9530026P05Rik	intron	ENSMUSG00000087573	ProperStrand	51	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-8.9191
chr10	121490999	121491129	LINE	Lx4A	L1	chr10Lx4A121490983	NonProperStrand	1	chr8	14474394	14474410	protein_coding	Dlgap2	intron	ENSMUSG00000047495	NonProperStrand	23	1	-inf
chr5	124150340	124150357	protein_coding	Zcchc8	utr3	ENSMUSG00000029427	ProperStrand	13	chr7	123476730	123476771	snoRNA	ENSMUSG00000064741_Snord14a	.	ENSMUSG00000064741	ProperStrand	83	1	-15.7726
chr13	115479020	115479100	LINE	L1Md_F2	L1	chr13L1Md_F2115478901	ProperStrand	1	chr13	115478709	115478799	LTR	RLTR14	ERV1	chr13RLTR14115478702	ProperStrand	1	1	-inf
chr8	37777518	37777537	protein_coding	Dlc1	intron	ENSMUSG00000031523	NonProperStrand	19	chr7	29136525	29136568	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.4734
chr10	69560272	69560311	protein_coding	Ccdc6	exon	ENSMUSG00000048701	ProperStrand	72	chr4	131908812	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.9862
chr1	102076737	102076805	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	chr4	131908236	131908384	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	6	-0.7403
chr19	47970971	47970987	protein_coding	Itprip	utr3	ENSMUSG00000079254	ProperStrand	75	chr19	8963113	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.9113
chr13	13557802	13560572	protein_coding	Nid1	exon	ENSMUSG00000005397	ProperStrand	112	chr11	69730458	69730487	protein_coding	Eif5a	utr3	ENSMUSG00000078812	ProperStrand	164	3	-22.0127
chr17	12585979	12585995	protein_coding	Plg	exon	ENSMUSG00000059481	ProperStrand	86	chr12	17552964	17553030	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	3	-10.5459
chr4	62157484	62157549	protein_coding	Bspry	exon	ENSMUSG00000028392	ProperStrand	7	chrX	71517836	71517926	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-10.9474
chr10	80643020	80643036	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr7	28457711	28457823	protein_coding	Map3k10	intron	ENSMUSG00000040390	ProperStrand	14	1	-9.0317
chr11	60220262	60220352	protein_coding	Atpaf2	intron	ENSMUSG00000042709	ProperStrand	12	chr7	117166770	117166850	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-8.0340
chr15	79620221	79620311	protein_coding	Npcd	exon	ENSMUSG00000089837	ProperStrand	11	chr11	68886949	68887029	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-7.5122
chr8	125409568	125409605	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	chr16	23110549	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-0.9942
chr2	164257636	164257652	protein_coding	Sdc4	intron	ENSMUSG00000017009	ProperStrand	177	chr11	69483212	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-0.8590
chr9	64023248	64023272	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	chr15	79908939	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-1.2171
chr6	125126691	125126791	protein_coding	Ncapd2	exon	ENSMUSG00000038252	ProperStrand	170	chr7	29136593	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-2.8198
chr1	162965982	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	NonProperStrand	8	chr17	35089178	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	NonProperStrand	5	1	-18.8889
chr8	41586177	41586267	protein_coding	Cnot7	exon	ENSMUSG00000031601	ProperStrand	19	chr7	29136556	29136636	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.4734
chr6	72552744	72552834	protein_coding	Retsat	exon	ENSMUSG00000056666	ProperStrand	12	chr16	23110456	23110536	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	11	-20.3995
chr4	117317845	117317929	protein_coding	Eri3	intron	ENSMUSG00000033423	ProperStrand	246	chr15	79908957	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-2.8309
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr5	143665471	143665572	protein_coding	Actb	utr3	ENSMUSG00000029580	ProperStrand	446	1	-3.8925
chr18	75432888	75432984	protein_coding	Dym	intron	ENSMUSG00000035765	ProperStrand	22	chr16	23110966	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.4786
chr4	139204299	139204389	protein_coding	Aldh4a1	utr3	ENSMUSG00000028737	ProperStrand	20	chr8	73419668	73419748	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-12.3818
chrX	83547356	83547372	protein_coding	Mageb4	intron	ENSMUSG00000035427	NonProperStrand	191	chr19	8799582	8799636	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	2	-7.4873
chr10	5634068	5634084	protein_coding	Esr1	exon	ENSMUSG00000019768	NonProperStrand	24	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-10.7783
chr4	18020485	18020501	protein_coding	Mmp16	exon	ENSMUSG00000028226	ProperStrand	55	chr4	132530097	132530117	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	1	-9.7751
chr18	22610928	22610944	protein_coding	Asxl3	exon	ENSMUSG00000045215	NonProperStrand	8	chr16	23111372	23111447	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.8232
chr3	88787952	88788012	protein_coding	Ash1l	exon	ENSMUSG00000028053	ProperStrand	30	chr11	69481383	69481473	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-4.4996
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr14	119053504	119053539	protein_coding	Abcc4	exon	ENSMUSG00000032849	ProperStrand	137	1	-7.1935
chr5	74489201	74489232	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr2	130103462	130103502	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-1.0657
chr1	88252836	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	chr5	121655052	121655154	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	7	-1.0301
chr7	147291697	147291756	protein_coding	Echs1	utr3	ENSMUSG00000025465	ProperStrand	10	chr17	35299551	35299641	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-8.3738
chr4	128628012	128639340	protein_coding	Adc	utr5	ENSMUSG00000028789	ProperStrand	10	chr2	26493366	26493473	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-11.8381
chr16	24984504	24984520	protein_coding	Lpp	utr3	ENSMUSG00000033306	NonProperStrand	189	chr19	8963027	8963116	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-1.4061
chr10	61329160	61330213	protein_coding	Col13a1	exon	ENSMUSG00000058806	ProperStrand	120	chr11	62416598	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-3.8450
chr10	90581033	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	12	-2.7630
chr12	55155933	55156023	protein_coding	Npas3	intron	ENSMUSG00000021010	NonProperStrand	29	chr3	123210892	123210972	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	6	-18.0860
chr4	131908720	131908810	lincRNA	Gm17300	exon	ENSMUSG00000091021	ProperStrand	109	chr1	153231629	153235760	protein_coding	1200016B10Rik	exon	ENSMUSG00000052748	ProperStrand	16	1	-14.8049
chr5	142934519	142934609	protein_coding	Foxk1	utr3	ENSMUSG00000056493	ProperStrand	19	chr11	69481352	69481385	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.3947
chr19	30217866	30217932	protein_coding	Gldc	exon	ENSMUSG00000024827	ProperStrand	175	chr11	77322088	77322105	protein_coding	Trp53i13	exon	ENSMUSG00000044328	ProperStrand	14	1	-14.1313
chr6	74292155	74292174	Other	RMER1A	Other	chr6RMER1A74291618	ProperStrand	2	chr13	74495914	74495937	protein_coding	Ccdc127	utr3	ENSMUSG00000021578	ProperStrand	12	1	-inf
chr6	65042519	65042535	protein_coding	Smarcad1	exon	ENSMUSG00000029920	NonProperStrand	5	chr5	115940303	115940406	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	1	-13.8972
chr2	26494708	26494825	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	chr14	31827477	31827549	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	18	-7.1498
chr7	133641029	133641051	protein_coding	Atxn2l	exon	ENSMUSG00000032637	ProperStrand	219	chr4	131865885	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-1.9787
chrX	132673816	132673833	protein_coding	Bex4	intron	ENSMUSG00000047844	NonProperStrand	70	chr9	15119646	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	7	-16.7390
chr11	79382642	79382659	protein_coding	Nf1	exon	ENSMUSG00000020716	ProperStrand	42	chr15	34370614	34370664	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-4.2181
chr18	35714262	35714291	lincRNA	Snhg4	intron	ENSMUSG00000090430	ProperStrand	270	chr6	39537409	39537462	protein_coding	Adck2	exon	ENSMUSG00000046947	ProperStrand	6	2	-18.9947
chr8	32239595	32239611	protein_coding	Rnf122	utr3	ENSMUSG00000039328	NonProperStrand	42	chr10	110918549	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-4.1148
chr4	116230385	116230401	protein_coding	Gpbp1l1	utr5	ENSMUSG00000034042	NonProperStrand	106	chr2	26494708	26494758	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.1267
chr5	77396284	77396379	protein_coding	Paics	utr3	ENSMUSG00000029247	ProperStrand	78	chr7	117189959	117189979	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.8614
chr2	119761087	119761138	protein_coding	Mga	exon	ENSMUSG00000033943	ProperStrand	180	chr1	88247743	88247796	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-3.0398
chr11	100238104	100238194	protein_coding	Jup	exon	ENSMUSG00000001552	ProperStrand	123	chr3	123210893	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-2.0121
chr17	39985500	39985666	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr6	71832551	71832642	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	4	-1.2161
chr5	100467817	100467905	protein_coding	Hnrpdl	exon	ENSMUSG00000029328	ProperStrand	39	chr4	131908806	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-7.3311
chr17	88874180	88874245	protein_coding	Foxn2	intron	ENSMUSG00000034998	ProperStrand	7	chr9	63868722	63868739	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	3	-19.8174
chr11	117610956	117611031	protein_coding	Tnrc6c	exon	ENSMUSG00000025571	ProperStrand	51	chr4	131865923	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-5.5951
chr2	41199972	41199989	protein_coding	Lrp1b	exon	ENSMUSG00000049252	ProperStrand	376	chr4	131865394	131865457	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-0.9942
chr12	114147795	114147875	protein_coding	Jag2	exon	ENSMUSG00000002799	ProperStrand	28	chr15	82980102	82980192	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-8.6687
chr5	73348817	73348870	protein_coding	Slain2	exon	ENSMUSG00000036087	ProperStrand	15	chr7	52560178	52560194	protein_coding	Trpm4	utr3	ENSMUSG00000038260	ProperStrand	161	1	-14.1556
chr11	44335900	44335949	protein_coding	Rnf145	intron	ENSMUSG00000019189	ProperStrand	46	chr9	120038550	120038640	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	5	-15.0378
chr8	26681265	26681289	protein_coding	Fgfr1	exon	ENSMUSG00000031565	ProperStrand	10	chr17	24857729	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-5.6778
chr17	23806449	23806465	protein_coding-noncoding	Thoc6	utr3	ENSMUSG00000041319	NonProperStrand	6	chr5	108334195	108334260	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-9.5107
chr19	5797220	5797271	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr9	78023109	78023150	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	1	-0.9050
chr1	141319671	141319687	protein_coding	Zbtb41	utr5	ENSMUSG00000033964	NonProperStrand	145	chr19	46406056	46406088	protein_coding	Cuedc2	exon	ENSMUSG00000036748	ProperStrand	12	1	-14.8214
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr12	82317769	82317785	protein_coding	Slc8a3	exon	ENSMUSG00000079055	ProperStrand	126	2	-10.1529
chr4	116862585	116862663	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	chr11	98878344	98878456	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	4	-7.9570
chr6	124408018	124408038	protein_coding	Clstn3	exon	ENSMUSG00000008153	ProperStrand	10	chr7	116663633	116663709	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-14.0787
chr14	76247726	76247816	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	chr17	26360446	26360536	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	5	-7.6284
chr11	94853508	94853525	protein_coding	Ppp1r9b	exon	ENSMUSG00000038976	ProperStrand	27	chr4	131908318	131908417	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-4.7684
chr12	30665437	30665537	protein_coding	Pxdn	intron	ENSMUSG00000020674	ProperStrand	33	chr7	117189991	117190060	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.4547
chr6	126790615	126790634	protein_coding	Ndufa9	exon	ENSMUSG00000000399	ProperStrand	9	chr14	33005138	33005218	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-7.7725
chr19	25484358	25484374	protein_coding	Kank1	exon	ENSMUSG00000032702	ProperStrand	218	chr4	108013782	108013809	protein_coding	2010305A19Rik	utr3	ENSMUSG00000048351	ProperStrand	8	2	-19.6447
chr18	35744340	35744420	protein_coding	Matr3	exon	ENSMUSG00000037236	ProperStrand	90	chr10	62275557	62275647	protein_coding	Tet1	exon	ENSMUSG00000047146	ProperStrand	286	1	-9.3697
chr2	129998658	129998715	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr10	23505148	23505282	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	18	-1.9368
chr6	39349278	39349348	protein_coding	Mkrn1	exon	ENSMUSG00000029922	ProperStrand	177	chr11	116938656	116938746	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-4.0706
chr11	6315913	6315979	protein_coding	Ppia	exon	ENSMUSG00000071866	ProperStrand	127	chr17	39985588	39985688	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-4.4790
chr18	73693111	73693147	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr7	52382754	52382826	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	2	-0.7906
chr15	58764827	58764920	protein_coding	Tatdn1	intron	ENSMUSG00000050891	ProperStrand	7	chrX	143918835	143918885	snoRNA	ENSMUSG00000084421_SNORA35	.	ENSMUSG00000084421	ProperStrand	293	5	-19.6617
chr2	26767600	26767670	protein_coding	Rpl7a	exon	ENSMUSG00000062647	ProperStrand	234	chr12	112779178	112779268	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	3	-6.1332
chr2	26493438	26493518	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr7	73128685	73170153	protein_coding	Pcsk6	exon	ENSMUSG00000030513	ProperStrand	32	1	-7.4464
chr8	77644716	77644743	protein_coding	Mcm5	exon	ENSMUSG00000005410	ProperStrand	199	chr6	29515227	29515705	protein_coding	Tnpo3	exon	ENSMUSG00000012535	ProperStrand	58	4	-19.1806
chr4	106164708	106164724	protein_coding	Bsnd	utr5	ENSMUSG00000025418	ProperStrand	22	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-12.7984
chr8	85961925	85961941	protein_coding	Scoc	utr5	ENSMUSG00000063253	ProperStrand	23	chr2	144087420	144087449	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-8.4683
chr4	17498786	17498845	LINE	L1Md_Gf	L1	chr4L1Md_Gf17498267	ProperStrand	1	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-inf
chr3	104460590	104460635	protein_coding	Slc16a1	utr3	ENSMUSG00000032902	ProperStrand	48	chr4	101331015	101331031	protein_coding	Leprot	utr3	ENSMUSG00000035212	ProperStrand	22	1	-15.7798
chr4	43505703	43505783	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr1	89308425	89313465	protein_coding	Gigyf2	exon	ENSMUSG00000048000	ProperStrand	128	28	-21.2533
chr2	130103436	130103461	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	chr12	110887828	110887894	snoRNA	ENSMUSG00000084549_SNORD113	.	ENSMUSG00000084549	ProperStrand	196	1	-5.7224
chr11	88786000	88790513	protein_coding	Scpep1	exon	ENSMUSG00000000278	ProperStrand	54	chr16	23110533	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	4	-9.4454
chr8	15011049	15011065	protein_coding	Kbtbd11	utr5	ENSMUSG00000055675	NonProperStrand	2	chr11	62416578	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-12.5746
chr11	53430821	53430840	protein_coding	Il4	utr5	ENSMUSG00000000869	NonProperStrand	11	chr11	77996557	77996612	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-9.5258
chr11	51433394	51433462	protein_coding	Nhp2	exon	ENSMUSG00000001056	ProperStrand	32	chr8	73419656	73419756	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.3013
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr3	88684243	88684333	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	2	-1.5253
chr7	74817872	74817889	protein_coding	Ttc23	intron	ENSMUSG00000030555	NonProperStrand	2	chr16	23111734	23111825	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-8.9529
chr13	36818659	36818675	protein_coding	Nrn1	exon	ENSMUSG00000039114	ProperStrand	15	chr1	89673585	89673685	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	6	-24.9890
chr18	84665329	84665409	protein_coding-noncoding	Zfp407	utr3	ENSMUSG00000048410	NonProperStrand	1	chr18	84665444	84665534	protein_coding	Zfp407	intron	ENSMUSG00000048410	NonProperStrand	16	1	-inf
chr13	38022297	38022334	protein_coding	Rreb1	exon	ENSMUSG00000039087	ProperStrand	33	chr2	26493366	26493476	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-8.0893
chr8	72287172	72287188	protein_coding	Zfp866	utr3	ENSMUSG00000043090	NonProperStrand	134	chr7	116663634	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	4	-5.4399
chr7	152047557	152047672	protein_coding	Fgf4	exon	ENSMUSG00000050917	ProperStrand	66	chr12	81859582	81859600	protein_coding	Gm1568	exon	ENSMUSG00000062961	ProperStrand	3	1	-20.1561
chr13	113284827	113284926	protein_coding	Il6st	exon	ENSMUSG00000021756	ProperStrand	34	chr4	130305564	130305620	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	1	-11.0554
chr13	103528411	103528476	protein_coding	Mast4	exon	ENSMUSG00000034751	ProperStrand	150	chr1	162965981	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	6	-12.3417
chr10	79326515	79326556	protein_coding	Ptbp1	utr3	ENSMUSG00000006498	ProperStrand	129	chr7	148634708	148634798	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-2.6012
chr8	86621724	86621824	protein_coding	Dcaf15	intron	ENSMUSG00000037103	ProperStrand	32	chr1	162967140	162967178	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	1	-9.9458
chr9	57385425	57385441	protein_coding	2310046O06Rik	utr5	ENSMUSG00000032305	ProperStrand	135	chr17	35089228	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-3.9318
chr19	4324964	4324980	protein_coding	Kdm2a	exon	ENSMUSG00000054611	ProperStrand	71	chr12	106269284	106269403	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	4	-12.5352
chr1	162967491	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	chr2	130103751	130103808	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	6	-3.2853
chr11	53075178	53075278	protein_coding	Hspa4	exon	ENSMUSG00000020361	ProperStrand	69	chr11	69483238	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.2149
chr14	30281131	30347672	protein_coding	Cacna2d3	exon	ENSMUSG00000021991	ProperStrand	21	chr16	23111383	23111436	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.9586
chr11	115999772	115999841	protein_coding	Mrpl38	exon	ENSMUSG00000020775	ProperStrand	25	chr16	23111793	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-8.6516
chr15	89362075	89362537	protein_coding	Shank3	exon	ENSMUSG00000022623	ProperStrand	19	chr9	15119676	15119762	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	6	-21.2507
chr16	87700688	87700705	protein_coding	Bach1	intron	ENSMUSG00000025612	NonProperStrand	20	chr8	67219131	67219148	protein_coding	Klhl2	utr3	ENSMUSG00000031605	ProperStrand	14	1	-19.5947
chr12	112779147	112779170	protein_coding	Eif5	intron	ENSMUSG00000021282	ProperStrand	125	chr13	68759738	68764669	protein_coding	Adcy2	exon	ENSMUSG00000021536	ProperStrand	237	1	-9.0874
chr8	73419683	73419773	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	NonProperStrand	53	chr17	24857716	24857808	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	NonProperStrand	27	4	-19.8071
chr4	131866576	131866666	lincRNA	Snhg12	exon	ENSMUSG00000086290	ProperStrand	178	chr9	114319582	114319662	protein_coding	Glb1	intron	ENSMUSG00000045594	ProperStrand	67	1	-10.9094
chr10	114846192	114846254	protein_coding	Zfc3h1	utr5	ENSMUSG00000034163	ProperStrand	58	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-3.6550
chr9	21198197	21198689	protein_coding	Ilf3	exon	ENSMUSG00000032178	ProperStrand	164	chr4	10801278	10801295	tRNA	tRNA16-SerAGA	.	1516772	ProperStrand	7	1	-15.7484
chr9	55057284	55061717	protein_coding	Fbxo22	exon	ENSMUSG00000032309	ProperStrand	79	chr14	52829510	52829569	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	2	-12.2449
chr5	77771746	77771920	protein_coding	Polr2b	exon	ENSMUSG00000029250	ProperStrand	68	chr19	8799037	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	3	-12.9785
chr11	9964488	9964506	LINE	Lx2	L1	chr11Lx29964471	ProperStrand	11	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-12.0541
chr2	93040824	93040877	protein_coding	Trp53i11	utr3	ENSMUSG00000068735	ProperStrand	46	chr11	97642952	97643037	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.9356
chr2	160791793	160791893	protein_coding	Chd6	exon	ENSMUSG00000057133	ProperStrand	104	chr7	67123696	67123725	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	1	-8.4374
chr7	134671430	134671510	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	NonProperStrand	3	chr11	69483193	69483283	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	NonProperStrand	35	1	-inf
chr4	24261811	24261891	LINE	L1Md_F2	L1	chr4L1Md_F224261398	ProperStrand	1	chr4	24261949	24262039	LINE	L1Md_F2	L1	chr4L1Md_F224261900	ProperStrand	1	1	-inf
chr1	134361894	134361910	protein_coding	Dstyk	utr3	ENSMUSG00000042046	ProperStrand	11	chr1	9932554	9932624	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-11.1844
chr13	38071438	38071490	protein_coding	Ssr1	utr3	ENSMUSG00000021427	ProperStrand	65	chr6	115758022	115758122	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-5.3158
chr13	90245896	90245996	protein_coding	Tmem167	utr3	ENSMUSG00000012422	ProperStrand	11	chr16	23110967	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.6241
chr2	113679891	113679953	protein_coding	Arhgap11a	exon	ENSMUSG00000041219	ProperStrand	47	chr7	116664819	116664868	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.9773
chr13	13004590	13004680	LINE	L1VL4	L1	chr13L1VL413001604	NonProperStrand	1	chr13	13004896	13004986	LTR	MERVL_2A-int	ERVL	chr13MERVL_2A-int13004904	NonProperStrand	1	1	-inf
chr9	13610803	13610903	protein_coding	Mtmr2	utr3	ENSMUSG00000031918	ProperStrand	22	chr16	23111694	23111768	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.6613
chr3	36868149	36906062	protein_coding	4932438A13Rik	exon	ENSMUSG00000037270	ProperStrand	96	chr4	131866155	131866292	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	4	-9.8489
chr5	8720055	8720145	protein_coding	Abcb1a	intron	ENSMUSG00000040584	ProperStrand	12	chr1	72272839	72272919	snRNA	ENSMUSG00000075752_U2	.	ENSMUSG00000075752	ProperStrand	535	1	-12.2156
chr8	119103090	119103111	protein_coding	Cdyl2	exon	ENSMUSG00000031758	ProperStrand	35	chr7	116663637	116663681	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.4745
chr4	43434675	43434769	protein_coding	Rusc2	exon	ENSMUSG00000035969	ProperStrand	22	chr1	42755254	42755270	protein_coding	Pou3f3	exon	ENSMUSG00000045515	NonProperStrand	117	1	-14.0088
chr14	41721011	41721052	protein_coding	Tspan14	utr3	ENSMUSG00000037824	ProperStrand	31	chr13	17895491	17895553	protein_coding	Cdk13	exon	ENSMUSG00000041297	ProperStrand	29	1	-16.1264
chr14	51427119	51427219	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr3	152450608	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	1	-2.9071
chr17	95125139	95125204	LTR	RLTR15	ERVK	chr17RLTR1595125023	NonProperStrand	5	chr17	47821124	47821178	protein_coding	Usp49	utr3	ENSMUSG00000090115	ProperStrand	8	2	-18.8127
chr17	24857633	24857672	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr13	51743580	51743703	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	4	-11.2213
chr14	28263024	28263133	protein_coding	D14Abb1e	exon	ENSMUSG00000040651	ProperStrand	49	chr3	123210876	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-6.4180
chr13	21284068	21284135	protein_coding	Trim27	exon	ENSMUSG00000021326	ProperStrand	28	chr2	166890524	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-9.0896
chr5	3693225	3693242	protein_coding	Ankib1	exon	ENSMUSG00000040351	ProperStrand	12	chr9	120038548	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	NonProperStrand	28	1	-17.8760
chr5	74489202	74489620	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr9	15119631	15119968	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	24	-1.5170
chr2	90235318	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	104351987	104352007	Other	RMER1A	Other	chr10RMER1A104351322	ProperStrand	15	1	-7.2074
chr18	13150042	13150076	protein_coding	Impact	utr3	ENSMUSG00000024423	ProperStrand	32	chr8	74008400	74008417	protein_coding	Ano8	exon	ENSMUSG00000034863	NonProperStrand	171	1	-12.4814
chr7	35130498	35130565	protein_coding	Lsm14a	utr3	ENSMUSG00000066568	ProperStrand	31	chr16	23110940	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	9	-15.1034
chr12	12946920	12946953	protein_coding	Mycn	exon	ENSMUSG00000037169	ProperStrand	24	chrX	71517922	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-8.3819
chr16	43908739	43915632	protein_coding	2610015P09Rik	exon	ENSMUSG00000022701	ProperStrand	12	chr9	120038633	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-6.1449
chrX	149828130	149828146	protein_coding	Klf8	utr3	ENSMUSG00000041649	NonProperStrand	107	chr8	73419712	73419775	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.1325
chr13	69673211	69673235	protein_coding	Nsun2	intron	ENSMUSG00000021595	NonProperStrand	9	chr5	23151876	23151893	protein_coding	Srpk2	intron	ENSMUSG00000062604	NonProperStrand	38	1	-17.7863
chr6	124791245	124791261	protein_coding	Leprel2	utr3	ENSMUSG00000023191	ProperStrand	44	chr15	79911611	79911644	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.1738
chr1	71644846	71644866	protein_coding	Fn1	intron	ENSMUSG00000026193	ProperStrand	931	chr1	155334415	155334431	protein_coding	Dhx9	intron	ENSMUSG00000042699	NonProperStrand	8	1	-11.9619
chr5	104257407	104257487	protein_coding	Aff1	exon	ENSMUSG00000029313	ProperStrand	82	chr5	108336405	108336495	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-4.2829
chr5	141000554	141000570	protein_coding	Chst12	exon	ENSMUSG00000036599	NonProperStrand	42	chr19	8799032	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-6.5374
chr9	64022866	64022923	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	chr16	23109027	23109077	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-2.2982
chr15	54914650	54915616	protein_coding	Dscc1	exon	ENSMUSG00000022422	ProperStrand	6	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	2	-inf
chr10	7310014	7310031	protein_coding	Lrp11	exon	ENSMUSG00000019796	ProperStrand	12	chr8	26944307	26945454	protein_coding	Ash2l	exon	ENSMUSG00000031575	ProperStrand	113	1	-15.3529
chr17	24342577	24342597	protein_coding	Ntn3	utr3	ENSMUSG00000079662	ProperStrand	237	chr4	56910496	56910625	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-3.4802
chr12	60141414	60141504	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	chr4	116826699	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-1.0258
chr7	4115771	4116122	protein_coding	Cdc42ep5	utr5	ENSMUSG00000063838	ProperStrand	2	chr4	131908241	131908331	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-8.3123
chr10	75209237	75209337	protein_coding	Cabin1	exon	ENSMUSG00000020196	ProperStrand	62	chr16	23111777	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-5.1981
chr16	32239831	32246946	protein_coding	Fbxo45	intron	ENSMUSG00000035764	ProperStrand	19	chr11	97642952	97643055	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	4	-14.8567
chr2	90235291	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr16	58435561	58435578	protein_coding	Dcbld2	intron	ENSMUSG00000035107	ProperStrand	56	1	-4.5948
chr12	3469537	3469570	protein_coding	Asxl2	exon	ENSMUSG00000037486	ProperStrand	21	chr7	117166786	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-6.8899
chrX	70588350	70588387	protein_coding	Zfp275	intron	ENSMUSG00000031365	ProperStrand	9	chr1	138178661	138178677	protein_coding	Camsap2	exon	ENSMUSG00000041570	NonProperStrand	116	1	-15.8661
chr1	141071037	141071117	protein_coding	Dennd1b	utr3	ENSMUSG00000056268	ProperStrand	23	chr15	98350178	98350268	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-6.6496
chr8	124409902	124410252	protein_coding	Slc7a5	exon	ENSMUSG00000040010	ProperStrand	166	chr11	116809790	116809809	protein_coding	Mgat5b	intron	ENSMUSG00000043857	NonProperStrand	15	1	-14.0914
chr2	32563527	32563545	protein_coding	Cdk9	exon	ENSMUSG00000009555	NonProperStrand	49	chr18	33954827	33954899	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-3.8820
chr1	64778710	64778800	protein_coding	Fzd5	utr3	ENSMUSG00000045005	ProperStrand	175	chr7	148634715	148634795	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-2.0907
chr2	41199972	41199989	protein_coding	Lrp1b	exon	ENSMUSG00000049252	ProperStrand	376	chr3	68889148	68889275	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	8	-8.6461
chr2	90235294	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	89408214	89599820	protein_coding	Fshr	intron	ENSMUSG00000032937	NonProperStrand	29	2	-9.6062
chr11	115439876	115440135	protein_coding	Nup85	exon	ENSMUSG00000020739	ProperStrand	33	chr12	60141330	60141408	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-8.0247
chr15	103043535	103043615	protein_coding	Cbx5	exon	ENSMUSG00000009575	ProperStrand	98	chr19	60845793	60845883	protein_coding	Eif3a	exon	ENSMUSG00000024991	ProperStrand	287	1	-9.1922
chr11	116295737	116295895	protein_coding	Fam100b	exon	ENSMUSG00000050628	ProperStrand	97	chr7	118219704	118219740	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-3.2792
chr19	7294691	7294771	SINE	B1_Mur1	Alu	chr19B1_Mur17294681	NonProperStrand	1	chr19	7294798	7294888	SINE	B1_Mus1	Alu	chr19B1_Mus17294816	ProperStrand	1	1	-inf
chr15	96520435	96520460	protein_coding	Slc38a2	utr3	ENSMUSG00000022462	ProperStrand	133	chr8	121869517	121869561	protein_coding	Hsbp1	exon	ENSMUSG00000031839	ProperStrand	4	1	-17.3500
chr2	145076805	145209256	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	chr15	34370544	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	8	-3.4463
chr17	86025062	86025080	protein_coding	Six3	utr3	ENSMUSG00000038805	NonProperStrand	1	chr9	120039546	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-inf
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	127737478	127737494	antisense	1700085B03Rik	.	ENSMUSG00000087104	ProperStrand	55	1	-4.6294
chr5	93522600	93568551	protein_coding	Sept11	exon	ENSMUSG00000058013	ProperStrand	79	chr19	8798737	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	2	-7.1398
chr3	63784089	63784149	protein_coding	Gmps	exon	ENSMUSG00000027823	ProperStrand	30	chrX	34622906	34622948	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	5	-18.1425
chr18	35063949	35063978	protein_coding	Etf1	utr3	ENSMUSG00000024360	ProperStrand	74	chr7	52381973	52382010	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-6.2971
chr1	130228347	130248039	protein_coding	Mcm6	utr3	ENSMUSG00000026355	ProperStrand	69	chr16	23111387	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	10	-17.0973
chr17	35299507	35299612	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	chr3	95980312	95980411	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	3	-0.7804
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr6	71832629	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-1.0022
chr7	116663633	116663749	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	chr11	115275138	115275168	tRNA	tRNA1023-ArgTCG	.	1646674	ProperStrand	15	1	-5.1056
chr15	79558695	79558785	protein_coding-noncoding	Sun2	utr3	ENSMUSG00000042524	NonProperStrand	1	chr15	79558374	79558454	protein_coding	Sun2	exon	ENSMUSG00000042524	NonProperStrand	3	1	-inf
chr13	63981587	63981603	protein_coding	0610007P08Rik	intron	ENSMUSG00000021470	ProperStrand	26	chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	1	-14.2527
chr6	54379743	54379760	lincRNA	9130019P16Rik	exon	ENSMUSG00000073067	ProperStrand	255	chr11	33056667	33056704	protein_coding	Npm1	exon	ENSMUSG00000057113	ProperStrand	352	1	-6.8853
chr9	120039585	120039626	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	chr13	22006777	22006815	tRNA	tRNA85-LeuCAA	.	363231	ProperStrand	54	1	-3.5118
chr10	83902991	83903098	protein_coding	Nuak1	exon	ENSMUSG00000020032	ProperStrand	12	chr9	110752656	110752674	protein_coding	Prss46	exon	ENSMUSG00000049719	NonProperStrand	2	1	-inf
chrX	71589885	71589903	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr1	59539683	59539700	protein_coding	Fzd7	utr5	ENSMUSG00000041075	ProperStrand	373	1	-6.5110
chr11	77995189	77995257	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	chr18	33954816	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	14	-2.7177
chr7	54247678	54247699	protein_coding	Spty2d1	utr3	ENSMUSG00000049516	ProperStrand	20	chr11	6428032	6428088	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.2839
chr4	147475493	147475509	protein_coding	2610109H07Rik	utr3	ENSMUSG00000029005	NonProperStrand	46	chr13	51743582	51743609	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-7.3894
chr9	114318570	114318595	protein_coding	Glb1	intron	ENSMUSG00000045594	ProperStrand	67	chr8	32260373	32260423	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-4.4188
chr13	112408141	112408160	processed_transcript	Gm15286	.	ENSMUSG00000086649	NonProperStrand	16	chr16	23110893	23110920	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.9771
chr12	88289017	88289034	protein_coding	2310044G17Rik	intron	ENSMUSG00000034157	ProperStrand	48	chr15	37936216	37936271	protein_coding	Ubr5	exon	ENSMUSG00000037487	ProperStrand	258	1	-10.8387
chr5	99987915	99987931	protein_coding	A930011G23Rik	exon	ENSMUSG00000089809	NonProperStrand	43	chr4	131865459	131865495	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-4.6368
chr5	118605334	118605431	protein_coding	Fbxw8	utr5	ENSMUSG00000032867	ProperStrand	61	chr9	103401280	103401296	protein_coding	Tmem108	exon	ENSMUSG00000042757	NonProperStrand	323	1	-9.9071
chr4	40897550	40899447	protein_coding	Chmp5	exon	ENSMUSG00000028419	ProperStrand	14	chr10	82657377	82657450	protein_coding	Chst11	utr3	ENSMUSG00000034612	ProperStrand	170	1	-14.1909
chr2	158182156	158182179	lincRNA	9430008C03Rik	intron	ENSMUSG00000085385	ProperStrand	1039	chr15	96517955	96518039	protein_coding	Slc38a2	utr3	ENSMUSG00000022462	ProperStrand	133	1	-6.0402
chr16	85802546	85802564	protein_coding	Adamts1	exon	ENSMUSG00000022893	ProperStrand	102	chr5	99987915	99987931	protein_coding	A930011G23Rik	exon	ENSMUSG00000089809	NonProperStrand	43	1	-12.9205
chr17	45704136	45704153	protein_coding	Slc35b2	exon	ENSMUSG00000037089	ProperStrand	55	chr7	148634705	148634837	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-4.1503
chr5	144395734	144395781	protein_coding	Cyth3	intron	ENSMUSG00000018001	ProperStrand	7	chr13	56353448	56353465	protein_coding	Neurog1	utr5	ENSMUSG00000048904	ProperStrand	105	1	-16.5931
chr15	102109941	102110016	protein_coding	Mfsd5	utr5	ENSMUSG00000045665	ProperStrand	26	chr8	32260335	32260362	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	3	-14.4528
chr10	80493332	80493432	protein_coding	Slc39a3	utr3	ENSMUSG00000046822	ProperStrand	6	chr15	5068442	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-10.7955
chr4	146613459	146613524	pseudogene	Gm13147	.	ENSMUSG00000087207	ProperStrand	2	chr10	110918552	110918642	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-10.7503
chr11	77995162	77995262	protein_coding	Rpl23a	intron	ENSMUSG00000058546	ProperStrand	121	chr5	135529856	135529909	snoRNA	ENSMUSG00000088008_SCARNA20	.	ENSMUSG00000088008	ProperStrand	139	1	-10.2184
chr15	82979639	82979709	protein_coding	Poldip3	utr5	ENSMUSG00000041815	ProperStrand	57	chr18	35716834	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.2546
chr14	32909774	32912622	protein_coding	Oxnad1	exon	ENSMUSG00000021906	ProperStrand	11	chr16	23110495	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.6740
chr18	57400307	57400324	protein_coding	Megf10	exon	ENSMUSG00000024593	ProperStrand	143	chr17	45810729	45810783	protein_coding	Tmem63b	exon	ENSMUSG00000036026	ProperStrand	93	1	-10.6893
chr7	51909335	51909368	protein_coding	Myh14	exon	ENSMUSG00000030739	ProperStrand	29	chr13	100204442	100204459	protein_coding	Mtap1b	utr3	ENSMUSG00000052727	NonProperStrand	20	1	-16.9402
chr5	77634444	77635963	protein_coding	Spink2	exon	ENSMUSG00000053030	ProperStrand	2	chr2	32818840	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-12.8884
chr1	46078108	46078129	protein_coding	Gm4776	utr3	ENSMUSG00000044457	NonProperStrand	24	chr7	109149271	109149287	protein_coding	Numa1	exon	ENSMUSG00000066306	NonProperStrand	171	2	-18.6907
chr19	47178574	47179171	protein_coding	Pdcd11	exon	ENSMUSG00000025047	ProperStrand	137	chr9	120039543	120039633	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.9031
chr11	6428054	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr16	38158127	38158227	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	9	-6.1747
chr11	55311193	55311230	protein_coding	G3bp1	exon	ENSMUSG00000018583	ProperStrand	106	chr7	29136565	29136655	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.4671
chr4	132530097	132530116	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	chr6	142439046	142441034	protein_coding	Ldhb	exon	ENSMUSG00000030246	ProperStrand	224	1	-6.9747
chr4	107596083	107596100	protein_coding	Cpt2	utr5	ENSMUSG00000028607	NonProperStrand	106	chr2	89368462	89368478	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	1	-9.2170
chr3	55987230	55987249	protein_coding	Nbea	utr5	ENSMUSG00000027799	NonProperStrand	115	chr13	59912923	59916306	protein_coding	Zcchc6	exon	ENSMUSG00000035248	ProperStrand	23	1	-13.9442
chr3	13151256	13151346	LTR	MTB-int	MaLR	chr3MTB-int13150346	ProperStrand	1	chr3	13151447	13151527	LTR	MTB	MaLR	chr3MTB13151368	ProperStrand	1	1	-inf
chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	chr1	91358413	91358430	protein_coding	Agap1	intron	ENSMUSG00000055013	ProperStrand	229	1	-5.4647
chr11	101919729	101919771	protein_coding	Mpp2	utr3	ENSMUSG00000017314	ProperStrand	3	chr4	131908770	131908885	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-6.9471
chr1	11141300	11141318	protein_coding	Prex2	intron	ENSMUSG00000048960	ProperStrand	12	chr1	89673598	89673688	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-6.3904
chr8	73419657	73419757	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	chr18	35100889	35100931	snoRNA	ENSMUSG00000089239_SNORD63	.	ENSMUSG00000089239	ProperStrand	18	1	-5.4264
chr18	42805538	42805554	protein_coding	Ppp2r2b	exon	ENSMUSG00000024500	NonProperStrand	95	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.1091
chr6	87864114	87864134	lincRNA	Gm16723	intron	ENSMUSG00000085703	ProperStrand	13	chr18	35716812	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.9970
chr1	137995413	137995430	protein_coding	Cacna1s	intron	ENSMUSG00000026407	NonProperStrand	37	chr9	108366611	108366653	protein_coding	Ccdc71	utr3	ENSMUSG00000049305	ProperStrand	4	1	-18.9976
chr9	58741789	58747001	protein_coding	Neo1	exon	ENSMUSG00000032340	ProperStrand	35	chr5	130300494	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.4721
chr18	60937515	60937537	protein_coding	Rps14	exon	ENSMUSG00000024608	ProperStrand	154	chr11	6428099	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.6154
chr8	93649964	93649993	protein_coding	Aktip	exon	ENSMUSG00000031667	ProperStrand	13	chr4	131908709	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.8088
chr4	116844399	116844945	protein_coding	Kif2c	exon	ENSMUSG00000028678	ProperStrand	32	chr3	123210853	123210953	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.1535
chr6	5081108	5081198	protein_coding	Ppp1r9a	intron	ENSMUSG00000032827	ProperStrand	50	chr4	131908266	131908346	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-3.1301
chr9	108462219	108462246	protein_coding	Qrich1	utr3	ENSMUSG00000006673	ProperStrand	30	chr7	118219574	118219630	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	3	-12.9054
chr15	48556321	48556339	protein_coding	Csmd3	intron	ENSMUSG00000022311	NonProperStrand	25	chr7	118219596	118219621	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-5.8729
chr4	46508116	46508157	snoRNA	ENSMUSG00000064410_SNORA36	.	ENSMUSG00000064410	ProperStrand	133	chr9	15119317	15119417	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	2	-6.1000
chr16	37384897	37384913	protein_coding	Stxbp5l	utr5	ENSMUSG00000022829	ProperStrand	332	chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	2	-7.3082
chr18	41356147	41356184	miRNA	Mir5097	dead	ENSMUSG00000093361	ProperStrand	221	chr9	106612704	106613019	protein_coding	Rad54l2	exon	ENSMUSG00000040661	ProperStrand	51	13	-inf
chr19	46448949	46448973	protein_coding	Tmem180	exon	ENSMUSG00000025227	ProperStrand	20	chr16	23111448	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-5.3125
chr17	37206258	37206358	protein_coding	Gabbr1	exon	ENSMUSG00000024462	ProperStrand	27	chr18	35714251	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.9601
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr11	106106695	106108113	protein_coding	Ddx42	exon	ENSMUSG00000020705	ProperStrand	26	1	-9.4790
chr3	90306053	90306111	protein_coding	2500003M10Rik	exon	ENSMUSG00000001017	ProperStrand	28	chr6	99558431	99558448	protein_coding	Eif4e3	intron	ENSMUSG00000030068	NonProperStrand	15	1	-17.5143
chr3	152450610	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	chr14	31932085	31932166	protein_coding	Pbrm1	utr3	ENSMUSG00000042323	ProperStrand	87	3	-17.7157
chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	chr1	162966190	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-4.6092
chr2	90235286	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	120657374	120657390	protein_coding	Far1	utr5	ENSMUSG00000030759	ProperStrand	72	2	-6.8999
chr3	8930033	8930109	protein_coding	Tpd52	utr3	ENSMUSG00000027506	ProperStrand	37	chr6	131330318	131330408	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	ProperStrand	408	9	-19.1466
chr5	134861678	134864358	protein_coding	Gtf2ird1	exon	ENSMUSG00000023079	ProperStrand	85	chr5	130300460	130300550	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.9331
chr3	89009743	89009759	protein_coding	Gba	exon	ENSMUSG00000028048	NonProperStrand	88	chr11	106362639	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-6.6441
chr14	31587294	31587310	antisense	1700087M22Rik	.	ENSMUSG00000087653	ProperStrand	2	chr16	23110894	23110923	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr3	40755217	40755233	protein_coding	Larp1b	intron	ENSMUSG00000037814	ProperStrand	29	chr19	8990742	8990803	protein_coding	Ganab	utr3	ENSMUSG00000071650	ProperStrand	145	1	-13.0134
chr10	127152705	127152721	protein_coding	Myo1a	exon	ENSMUSG00000025401	ProperStrand	93	chr2	26494779	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.3434
chr5	141193189	141193874	protein_coding	Baat1	exon	ENSMUSG00000000148	ProperStrand	14	chr3	146395487	146395523	protein_coding	Prkacb	utr3	ENSMUSG00000005034	ProperStrand	15	5	-inf
chr11	50046976	50047066	protein_coding	Mgat4b	exon	ENSMUSG00000036620	ProperStrand	10	chr5	108336363	108336405	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-13.6387
chr2	129998666	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr3	125574624	125574640	protein_coding	Ugt8a	exon	ENSMUSG00000032854	ProperStrand	16	1	-10.7885
chr12	23046726	23046796	lincRNA	2410018L13Rik	exon	ENSMUSG00000073164	ProperStrand	3	chr10	127525400	127525489	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	1	-15.0392
chr9	70247419	70247499	protein_coding	Myo1e	utr3	ENSMUSG00000032220	ProperStrand	36	chr11	69483134	69483224	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.3562
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr3	88715213	88715230	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-1.0201
chr11	69898888	69898968	SINE	B3	B2	chr11B369898849	NonProperStrand	1	chr11	69757101	69757191	protein_coding	Slc2a4	intron	ENSMUSG00000018566	ProperStrand	7	1	-inf
chr4	108278918	108278934	protein_coding	Orc1	exon	ENSMUSG00000028587	ProperStrand	161	chr4	131865855	131865925	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.1320
chr2	127416801	127416901	protein_coding	Mrps5	intron	ENSMUSG00000027374	ProperStrand	84	chr16	23110473	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.9074
chr5	110792820	110799980	protein_coding	Fbrsl1	exon	ENSMUSG00000043323	ProperStrand	131	chr5	130295414	130295502	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-3.7608
chr2	71740564	71740614	protein_coding	Pdk1	utr3	ENSMUSG00000006494	NonProperStrand	2	chr9	15119696	15119766	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	NonProperStrand	21	2	-inf
chr5	140243829	140244406	protein_coding	Ints1	exon	ENSMUSG00000029547	ProperStrand	45	chr5	121655032	121655100	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	3	-10.3685
chr9	35022591	35023116	protein_coding	Srpr	exon	ENSMUSG00000032042	ProperStrand	54	chr9	120039583	120039663	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.5118
chr1	177823041	177823057	protein_coding	Exo1	exon	ENSMUSG00000039748	ProperStrand	27	chr1	172975130	172975189	tRNA	tRNA699-GlyGCC	.	1872456	ProperStrand	660	1	-10.1268
chr6	53768013	53768029	protein_coding	Tril	exon	ENSMUSG00000043496	NonProperStrand	17	chr19	8798484	8798529	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-7.7258
chr16	22572859	22572876	protein_coding	Dgkg	intron	ENSMUSG00000022861	NonProperStrand	39	chr3	55011754	55012864	protein_coding	Sohlh2	exon	ENSMUSG00000027794	ProperStrand	11	1	-17.4666
chr1	58082725	58082741	protein_coding	Sgol2	utr3	ENSMUSG00000026039	ProperStrand	36	chr19	8798775	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	3	-13.4624
chr8	80822576	80822596	protein_coding	Ttc29	intron	ENSMUSG00000037101	NonProperStrand	6	chr11	116533841	116533893	snoRNA	ENSMUSG00000065640_Snord1c	.	ENSMUSG00000065640	ProperStrand	373	2	-19.1808
chr15	76330881	76330956	protein_coding	Hsf1	utr3	ENSMUSG00000022556	ProperStrand	4	chr15	34370558	34370648	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-9.0741
chr15	98356823	98356913	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	8	-9.2638
chr11	14961829	14961849	LINE	Lx	L1	chr11Lx14961726	ProperStrand	93	chr7	38468013	38468033	protein_coding	Zfp536	intron	ENSMUSG00000043456	ProperStrand	57	1	-12.5348
chr5	134865067	134865557	protein_coding	Gtf2ird1	exon	ENSMUSG00000023079	ProperStrand	85	chr16	23110457	23110547	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.8887
chr15	72934886	72934903	protein_coding	Eif2c2	utr3	ENSMUSG00000036698	ProperStrand	154	chr12	106269394	106269484	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-2.4390
chr19	53082307	53082324	protein_coding	Xpnpep1	intron	ENSMUSG00000025027	NonProperStrand	58	chr2	26493442	26493474	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-3.8057
chr1	188545262	188545352	protein_coding	Rrp15	utr3	ENSMUSG00000001305	ProperStrand	16	chr9	15119646	15119726	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.1098
chr11	95594530	95629866	protein_coding	Zfp652	intron	ENSMUSG00000075595	ProperStrand	48	chr11	6428076	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-6.1217
chr11	16928604	16928694	protein_coding	Plek	intron	ENSMUSG00000020120	NonProperStrand	5	chr4	111289372	111289452	protein_coding	Agbl4	intron	ENSMUSG00000061298	NonProperStrand	33	1	-18.3669
chr1	129271681	129271758	protein_coding	Mgat5	intron	ENSMUSG00000036155	ProperStrand	33	chr4	131866168	131866258	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-4.8017
chr17	35089118	35089198	processed_transcript	1110038B12Rik	.	ENSMUSG00000092203	ProperStrand	126	chr11	69484166	69484436	protein_coding	Eif4a1	exon	ENSMUSG00000059796	ProperStrand	108	1	-10.6428
chr17	12926675	12926775	protein_coding	Igf2r	exon	ENSMUSG00000023830	ProperStrand	151	chr2	168460191	168460208	protein_coding	Atp9a	utr3	ENSMUSG00000027546	NonProperStrand	3	1	-18.0132
chr13	23713985	23714010	protein_coding	Hist1h1e	exon	ENSMUSG00000051627	ProperStrand	41	chr3	108228259	108228275	protein_coding	Sars	utr3	ENSMUSG00000068739	NonProperStrand	200	1	-11.6667
chr12	68768904	68768984	LINE	L1Md_F2	L1	chr12L1Md_F268768613	NonProperStrand	12	chr6	66738604	66738694	LINE	L1Md_F2	L1	chr6L1Md_F266737489	ProperStrand	1	1	-inf
chr11	113005356	113005373	lincRNA	2610035D17Rik	intron	ENSMUSG00000087259	NonProperStrand	38	chr16	23110921	23110940	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.7634
chr2	179994616	179994681	protein_coding	Cables2	utr3	ENSMUSG00000038990	ProperStrand	9	chrX	34622906	34622944	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-6.8852
chr4	106472505	106472522	protein_coding	Acot11	intron	ENSMUSG00000034853	ProperStrand	61	chr19	8800421	8800470	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-5.9594
chr15	97897281	97906244	protein_coding	Senp1	exon	ENSMUSG00000033075	ProperStrand	24	chr4	131908689	131908722	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.6746
chr2	129998658	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr10	41644311	41644329	protein_coding	Armc2	exon	ENSMUSG00000071324	ProperStrand	281	1	-5.0689
chr1	152277747	152277782	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	chr2	120565481	120565581	protein_coding	Ttbk2	exon	ENSMUSG00000090100	ProperStrand	50	1	-9.2744
chr7	29052994	29053029	protein_coding	Eid2	exon	ENSMUSG00000046058	ProperStrand	4	chr10	23505177	23505267	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-10.6986
chr9	71326653	71326743	protein_coding	Polr2m	utr3	ENSMUSG00000032199	ProperStrand	83	chr5	130295408	130295488	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-4.6218
chr4	137066907	137066929	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	chr7	29582839	29582912	protein_coding	Rinl	utr3	ENSMUSG00000051735	ProperStrand	10	1	-11.7625
chr4	43505807	43505887	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr6	11856071	11857376	protein_coding	Ndufa4	utr5	ENSMUSG00000029632	ProperStrand	9	1	-6.7740
chr13	58134779	58134795	protein_coding	Klhl3	intron	ENSMUSG00000014164	NonProperStrand	11	chr8	129468750	129468799	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-7.7956
chr13	23653877	23653967	protein_coding	Hist1h3e	exon	ENSMUSG00000069273	ProperStrand	30	chr18	33954817	33954897	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-4.8204
chr7	106631098	106631145	protein_coding	Rps3	exon	ENSMUSG00000030744	ProperStrand	159	chr19	56888065	56888138	protein_coding	A630007B06Rik	exon	ENSMUSG00000035173	ProperStrand	11	2	-20.0128
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr2	155518045	155518061	protein_coding	Trpc4ap	utr5	ENSMUSG00000038324	ProperStrand	38	1	-9.5117
chr12	36797889	36797969	LTR	MLT1A0	MaLR	chr12MLT1A036797844	NonProperStrand	1	chr8	111345688	111345778	protein_coding	Zfhx3	intron	ENSMUSG00000038872	ProperStrand	65	1	-inf
chr9	60719914	60719930	protein_coding	Uaca	exon	ENSMUSG00000034485	ProperStrand	109	chr9	15118519	15118562	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	1	-8.1475
chr6	122682411	122686748	protein_coding	Slc2a3	exon	ENSMUSG00000003153	ProperStrand	682	chr11	97642952	97643014	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	5	-0.7559
chr14	30913954	30913970	protein_coding	Cacna1d	exon	ENSMUSG00000015968	ProperStrand	16	chr19	8798484	8798554	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	3	-17.6716
chr15	81110991	81111009	SINE	ID4	ID	chr15ID481110956	ProperStrand	272	chr1	88252883	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-3.7261
chr11	62416587	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	chr4	132394365	132394465	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	1	-1.4824
chr17	29071818	29071836	antisense	Gm16191	.	ENSMUSG00000087693	ProperStrand	25	chr2	144232881	144232926	protein_coding	Csrp2bp	utr3	ENSMUSG00000027425	ProperStrand	32	1	-16.3642
chr12	32170685	32170765	protein_coding	Cbll1	utr3	ENSMUSG00000020659	ProperStrand	19	chr5	121655039	121655129	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.9783
chr7	30231466	30231546	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	chr19	8800084	8800123	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-3.3048
chr15	79908939	79909025	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	chr1	9932548	9932606	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	2	-1.5807
chr7	54104450	54110661	protein_coding	Ldha	exon	ENSMUSG00000063229	ProperStrand	280	chr16	23110456	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-1.6432
chr17	80851352	80851369	protein_coding	Sos1	exon	ENSMUSG00000024241	ProperStrand	10	chr10	23505152	23505209	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.3364
chr9	21934462	21934478	protein_coding	Acp5	exon	ENSMUSG00000001348	ProperStrand	66	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-5.0266
chr8	112080086	112080368	protein_coding	Dhx38	exon	ENSMUSG00000037993	ProperStrand	27	chr18	33954920	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-5.0261
chr8	75782974	75782992	protein_coding	Large	intron	ENSMUSG00000004383	ProperStrand	48	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-12.1353
chr7	134912246	134912336	protein_coding	Fbxl19	utr3	ENSMUSG00000030811	ProperStrand	15	chr17	13112498	13112578	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-7.3293
chr4	149021853	149021893	protein_coding	Clstn1	utr3	ENSMUSG00000039953	ProperStrand	173	chr1	162966824	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-4.2091
chr11	117729370	117729386	protein_coding	Tha1	utr3	ENSMUSG00000017713	NonProperStrand	56	chr3	108357359	108357459	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-4.6724
chr14	63757836	63757887	protein_coding	Ctsb	exon	ENSMUSG00000021939	ProperStrand	48	chr17	87232113	87232166	protein_coding	Epas1	utr3	ENSMUSG00000024140	ProperStrand	62	1	-13.6978
chr6	124909591	124909857	protein_coding	Cops7a	utr3	ENSMUSG00000030127	ProperStrand	16	chr8	112140270	112140286	protein_coding	Pkd1l3	exon	ENSMUSG00000048827	ProperStrand	4	3	-inf
chr18	64616832	64616849	protein_coding	Fech	utr3	ENSMUSG00000024588	ProperStrand	14	chr19	7532308	7532324	protein_coding	Rtn3	exon	ENSMUSG00000024758	ProperStrand	35	1	-17.3969
chr2	9985901	9985917	protein_coding	Atp5c1	exon	ENSMUSG00000025781	ProperStrand	138	chr5	93371193	93371250	protein_coding	Shroom3	exon	ENSMUSG00000029381	ProperStrand	52	1	-11.9299
chr9	122977269	122977334	protein_coding-noncoding	Zdhhc3	utr3	ENSMUSG00000025786	ProperStrand	9	chr8	109063722	109063812	protein_coding	Cdh3	exon	ENSMUSG00000061048	ProperStrand	62	1	-17.1399
chr9	21393332	21393412	protein_coding	Carm1	utr3	ENSMUSG00000032185	ProperStrand	82	chr7	148634714	148634804	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-3.4066
chr13	95208158	95208248	protein_coding	Ap3b1	intron	ENSMUSG00000021686	ProperStrand	96	chrX	34622932	34623012	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	30	-20.7316
chr16	35981691	35981725	antisense	Gm15564	.	ENSMUSG00000086324	ProperStrand	6	chr16	11144137	11144227	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	1	-15.2045
chr7	117189863	117189944	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr9	64022897	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-1.4491
chr16	87731015	87731056	protein_coding	Bach1	utr3	ENSMUSG00000025612	ProperStrand	32	chr6	128386592	128386617	protein_coding	Fkbp4	exon	ENSMUSG00000030357	ProperStrand	114	1	-13.2941
chr14	76372321	76372411	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	chr5	108336363	108336402	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-2.2638
chr8	109184707	109184752	protein_coding	Cdh1	exon	ENSMUSG00000000303	ProperStrand	283	chr11	97642949	97643061	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-1.6319
chr2	68713198	68713239	protein_coding	Lass6	intron	ENSMUSG00000027035	ProperStrand	32	chr6	114260511	114260527	protein_coding	Slc6a1	exon	ENSMUSG00000030310	NonProperStrand	147	1	-12.7860
chr5	34234244	34234262	protein_coding	Whsc1	utr5	ENSMUSG00000057406	ProperStrand	409	chr2	130101971	130102089	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	193	-20.4785
chr7	133518691	133520358	protein_coding	Spns1	exon	ENSMUSG00000030741	ProperStrand	9	chr12	106269283	106269323	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-7.9279
chr1	193730797	193730813	protein_coding	Slc30a1	utr5	ENSMUSG00000037434	ProperStrand	42	chr4	116827121	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-7.7524
chr5	31461521	31461554	protein_coding	Gtf3c2	exon	ENSMUSG00000029144	ProperStrand	22	chr7	148634780	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-5.9356
chr3	96469988	96470068	SINE	B2_Mm1a	B2	chr3B2_Mm1a96469875	ProperStrand	1	chr4	153701271	153701361	protein_coding	Prdm16	intron	ENSMUSG00000039410	ProperStrand	44	1	-inf
chr4	34716334	34716352	protein_coding	1810030N24Rik	exon	ENSMUSG00000028295	ProperStrand	5	chr16	23111705	23111815	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	5	-inf
chr16	36772114	36772130	protein_coding	Slc15a2	exon	ENSMUSG00000022899	ProperStrand	13	chr2	26494708	26494760	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-6.0562
chr15	51630897	51674084	protein_coding	Eif3h	exon	ENSMUSG00000022312	ProperStrand	45	chr18	33954874	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	3	-9.8603
chr18	61715365	61715384	protein_coding	Csnk1a1	utr5	ENSMUSG00000024576	NonProperStrand	35	chr9	15118245	15118321	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-4.4816
chr7	26181911	26202421	protein_coding	Lipe	intron	ENSMUSG00000003123	NonProperStrand	63	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.1878
chr9	107307952	107307971	protein_coding	Cacna2d2	intron	ENSMUSG00000010066	NonProperStrand	13	chr11	68886977	68887047	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-7.1671
chr5	100855941	100856031	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr11	119141978	119142058	protein_coding	Gaa	intron	ENSMUSG00000025579	ProperStrand	149	1	-4.8601
chr2	166890780	166890857	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	chr17	35089181	35089250	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-2.7522
chr7	26149440	26149456	protein_coding	Megf8	exon	ENSMUSG00000045039	NonProperStrand	45	chr16	23110840	23110940	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.2682
chr12	60235132	60235178	snoRNA	ENSMUSG00000077505_SNORA26	.	ENSMUSG00000077505	NonProperStrand	1	chr14	33005046	33005089	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	NonProperStrand	13	1	-inf
chrX	68562686	68562783	protein_coding-noncoding	Mtm1	utr5	ENSMUSG00000031337	ProperStrand	1	chr18	35716825	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-inf
chr5	111148602	111148624	protein_coding	Ep400	exon	ENSMUSG00000029505	ProperStrand	176	chr11	62416575	62416627	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	4	-10.6920
chr18	68469038	68469097	protein_coding	Rnmt	exon	ENSMUSG00000009535	ProperStrand	21	chr1	162138513	162138613	protein_coding	Cacybp	exon	ENSMUSG00000014226	ProperStrand	39	1	-16.2574
chr13	55453144	55454322	protein_coding	Lman2	exon	ENSMUSG00000021484	ProperStrand	26	chr15	98350146	98350282	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	2	-10.4029
chr18	3515323	3515341	protein_coding	Bambi	utr3	ENSMUSG00000024232	NonProperStrand	1	chr1	162965981	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-inf
chr6	146971823	146971913	protein_coding	Ppfibp1	intron	ENSMUSG00000016487	ProperStrand	11	chr6	148775408	148775488	protein_coding	Ipo8	intron	ENSMUSG00000040029	NonProperStrand	2	1	-inf
chr10	120802275	120802297	protein_coding	Gns	exon	ENSMUSG00000034707	NonProperStrand	11	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-7.4568
chr14	8781049	8781090	protein_coding	Flnb	exon	ENSMUSG00000025278	ProperStrand	124	chr5	74489575	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-2.4779
chr2	162065760	162065776	protein_coding	Ptprt	intron	ENSMUSG00000053141	ProperStrand	28	chr14	31827478	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-8.4726
chr18	46451207	46453111	protein_coding	Ccdc112	exon	ENSMUSG00000071855	ProperStrand	5	chr16	23110912	23110960	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr1	136437794	136437845	protein_coding	4931440L10Rik	exon	ENSMUSG00000046367	ProperStrand	13	chr16	23110524	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	7	-inf
chr13	52742450	52742466	protein_coding	Syk	utr3	ENSMUSG00000021457	NonProperStrand	125	chr10	90581097	90581153	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-3.4261
chr8	48949882	48949962	protein_coding	Wwc2	exon	ENSMUSG00000031563	ProperStrand	37	chr3	123210867	123210957	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-5.0375
chr13	49062921	49062981	protein_coding	Fam120a	exon	ENSMUSG00000038014	ProperStrand	76	chr17	35607434	35607452	protein_coding	H2-Q10	exon	ENSMUSG00000067235	ProperStrand	1	1	-inf
chr8	35782897	35782914	LINE	Lx8	L1	chr8Lx835782461	ProperStrand	25	chr9	114465209	114465263	protein_coding	Trim71	intron	ENSMUSG00000079259	ProperStrand	162	1	-13.0920
chr4	86500797	86500827	protein_coding	Rps6	exon	ENSMUSG00000028495	ProperStrand	263	chr7	52263401	52263501	protein_coding	Scaf1	exon	ENSMUSG00000038406	ProperStrand	81	1	-9.7481
chr10	39978405	39978464	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	chr11	69164037	69164127	snoRNA	ENSMUSG00000087881_SCARNA21	.	ENSMUSG00000087881	ProperStrand	261	1	-2.7159
chr12	32172960	32173012	protein_coding	Cbll1	exon	ENSMUSG00000020659	ProperStrand	19	chr1	183282762	183282779	protein_coding	Cnih3	utr5	ENSMUSG00000026514	NonProperStrand	32	1	-16.8781
chr17	30772308	30772324	protein_coding	Dnahc8	utr5	ENSMUSG00000033826	ProperStrand	246	chr7	118219705	118219740	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-1.7093
chr17	35384118	35384175	snoRNA	ENSMUSG00000065273_SNORD83	.	ENSMUSG00000065273	ProperStrand	244	chr8	32260335	32260423	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-2.1042
mmu-miR-1949	0	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr1	129271706	129271757	snoRNA	ENSMUSG00000065687_snoU6-53	.	ENSMUSG00000065687	ProperStrand	78	2	-12.2027
chr16	37384897	37384913	protein_coding	Stxbp5l	utr5	ENSMUSG00000022829	ProperStrand	332	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-7.3474
chr10	75218125	75218197	protein_coding	Cabin1	utr5	ENSMUSG00000020196	ProperStrand	62	chr17	24857800	24857852	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-4.0058
chr9	21823257	21823273	protein_coding	Elavl3	exon	ENSMUSG00000003410	NonProperStrand	137	chr3	123210913	123210985	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-0.8881
chr18	21788641	21788659	protein_coding	Klhl14	intron	ENSMUSG00000042514	NonProperStrand	6	chr17	24857716	24857774	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-6.7526
chr13	107737212	107737228	protein_coding	Dimt1	utr5	ENSMUSG00000021692	ProperStrand	185	chr14	15572352	15572368	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	1	-9.0271
chr9	106595421	106595928	protein_coding	Rad54l2	exon	ENSMUSG00000040661	ProperStrand	51	chr16	23110829	23110940	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.0517
chr8	59991961	59992108	protein_coding	Hmgb2	exon	ENSMUSG00000054717	ProperStrand	184	chr1	88247742	88247766	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-3.0007
chr12	37542835	37542861	miRNA	Mir5099	.	ENSMUSG00000092998	ProperStrand	13	chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	1	-11.2186
chr8	124001847	124001863	protein_coding	Gm20388	intron	ENSMUSG00000092329	NonProperStrand	203	chr9	15119630	15119693	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-0.8223
chr19	8990606	8990671	protein_coding	Ganab	utr3	ENSMUSG00000071650	ProperStrand	145	chr8	129468789	129468879	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-2.7918
chr19	27842324	27842340	protein_coding	Rfx3	utr3	ENSMUSG00000040929	ProperStrand	92	chr10	23505559	23505617	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-6.7010
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chrX	7182489	7182506	protein_coding	Ccdc22	utr5	ENSMUSG00000031143	NonProperStrand	51	1	-4.7748
chr9	120859299	120859347	protein_coding	Ctnnb1	utr5	ENSMUSG00000006932	ProperStrand	214	chr9	15119662	15119761	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-0.7630
chr1	74575512	74575627	protein_coding	Rqcd1	utr3	ENSMUSG00000026174	ProperStrand	16	chr5	130300531	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-8.2823
chr7	52333167	52333185	protein_coding	Nosip	utr3	ENSMUSG00000003421	ProperStrand	27	chr8	91566820	91566848	protein_coding	Sall1	intron	ENSMUSG00000031665	ProperStrand	96	1	-13.9839
chr5	119181458	119184064	protein_coding	Med13l	exon	ENSMUSG00000018076	ProperStrand	226	chr5	108334264	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-2.3953
chr10	31037469	31037549	protein_coding-noncoding	Hddc2	utr5	ENSMUSG00000000295	ProperStrand	1	chr10	31037701	31037791	protein_coding	Hddc2	intron	ENSMUSG00000000295	ProperStrand	1	1	-inf
chr5	122247279	122247322	protein_coding	Atxn2	exon	ENSMUSG00000042605	ProperStrand	83	chr8	73419740	73419790	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.5587
chr7	31742947	31742971	antisense	Gm17077	.	ENSMUSG00000090357	ProperStrand	3	chr1	82679326	82679342	protein_coding	Col4a3	exon	ENSMUSG00000079465	ProperStrand	99	1	-19.2062
chr3	28706180	28706280	protein_coding	Rpl22l1	utr3	ENSMUSG00000039221	ProperStrand	4	chr1	162966018	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-9.1328
chr4	55363046	55363070	protein_coding	Rad23b	utr5	ENSMUSG00000028426	ProperStrand	86	chr4	131908351	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-3.0663
chr3	89583735	89584417	protein_coding	Ube2q1	exon	ENSMUSG00000042572	ProperStrand	32	chr5	108334225	108334315	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	6	-19.6841
chr5	55853908	55853998	LINE	Lx3B	L1	chr5Lx3B55853164	ProperStrand	1	chr15	83396091	83396181	protein_coding	Tspo	intron	ENSMUSG00000041736	NonProperStrand	5	1	-inf
chr16	23111445	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	chr6	38008006	38008060	snoRNA	ENSMUSG00000088263_snoU13	.	ENSMUSG00000088263	ProperStrand	13	1	-3.8569
chr8	85288349	85288802	protein_coding	Zfp330	exon	ENSMUSG00000031711	ProperStrand	75	chr18	33954848	33954928	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-3.0997
chr3	87422115	87422192	protein_coding	Arhgef11	utr5	ENSMUSG00000041977	ProperStrand	16	chr11	97642952	97643011	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.9320
chr2	143768096	143768169	protein_coding	Dstn	utr3	ENSMUSG00000015932	ProperStrand	22	chr4	122968648	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	8	-inf
chr11	98878343	98878457	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	chr17	24857718	24857847	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	41	-13.6904
chr15	79358689	79358747	protein_coding	Ddx17	utr3	ENSMUSG00000055065	ProperStrand	140	chr9	15118323	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-1.9978
chr2	26767738	26767784	protein_coding-noncoding	Rpl7a	utr5	ENSMUSG00000062647	ProperStrand	53	chr7	148634769	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-7.0659
chr4	43505782	43505824	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr8	77742558	77742574	protein_coding	Rasd2	exon	ENSMUSG00000034472	NonProperStrand	237	1	-0.9356
chr5	42606682	42606699	protein_coding	Gm16223	utr3	ENSMUSG00000067285	ProperStrand	3	chr17	13112491	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	3	-inf
chr11	58752153	58752207	protein_coding	Rnf187	utr5	ENSMUSG00000020496	ProperStrand	26	chr11	79950546	79950563	protein_coding	1110002N22Rik	utr3	ENSMUSG00000046909	ProperStrand	45	1	-15.5804
chr4	43016145	43016213	protein_coding	Fancg	exon	ENSMUSG00000028453	ProperStrand	13	chr12	92811922	92812012	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	1	-11.6824
chr7	3597094	3597171	protein_coding	Cnot3	utr5	ENSMUSG00000035632	ProperStrand	55	chr10	23505149	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	8	-14.3829
chrX	71473006	71485006	protein_coding	Flna	exon	ENSMUSG00000031328	ProperStrand	134	chr1	162967511	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-3.7307
chr11	95820918	95820951	protein_coding	Igf2bp1	utr3	ENSMUSG00000013415	ProperStrand	140	chr3	123210854	123210874	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-0.8626
chr4	124818333	124818423	SINE	ID_B1	B4	chr4ID_B1124818287	ProperStrand	1	chr4	124818131	124818221	SINE	RSINE1	B4	chr4RSINE1124818113	ProperStrand	1	1	-inf
chr11	3332469	3332538	protein_coding	Rnf185	exon	ENSMUSG00000020448	ProperStrand	12	chr4	131865930	131865976	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-11.4353
chr5	75473198	75473215	protein_coding	Gsx2	utr3	ENSMUSG00000035946	ProperStrand	307	chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	1	-8.1690
chr16	3856861	3856878	protein_coding	Zfp174	utr3	ENSMUSG00000054939	NonProperStrand	166	chr18	35714144	35714254	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	3	-4.8495
chr5	37667536	37667552	protein_coding	Crmp1	exon	ENSMUSG00000029121	ProperStrand	85	chr4	131908809	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.7895
chr1	155755198	155755301	protein_coding	Glul	exon	ENSMUSG00000026473	ProperStrand	54	chr12	60141423	60141441	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-7.0387
chr5	122691625	122691703	protein_coding	Hvcn1	utr3	ENSMUSG00000064267	ProperStrand	182	chr12	110874223	110874292	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	1	-7.7603
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr10	105010980	105010997	protein_coding	Tmtc2	utr5	ENSMUSG00000036019	ProperStrand	72	1	-8.2282
chr11	97888591	97888608	protein_coding	Rpl19	intron	ENSMUSG00000017404	NonProperStrand	9	chr9	40612091	40612148	snoRNA	ENSMUSG00000075924_Snord14d	.	ENSMUSG00000075924	ProperStrand	131	1	-15.6238
chr3	107131441	107131487	protein_coding	Rbm15	intron	ENSMUSG00000048109	ProperStrand	82	chr18	35714259	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-4.9974
chr4	59507481	59514273	protein_coding	Rod1	exon	ENSMUSG00000028382	ProperStrand	52	chr16	23110985	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-2.7859
chr18	66142019	66142081	protein_coding	Lman1	utr3	ENSMUSG00000041891	ProperStrand	36	chr1	141837040	141837140	pseudogene	Gm5834	.	ENSMUSG00000085867	ProperStrand	1	1	-inf
chr11	62416976	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	chr5	23358028	23358060	snoRNA	ENSMUSG00000093321_Snord93	.	ENSMUSG00000093321	ProperStrand	218	2	-6.0568
chr4	91012543	91012564	protein_coding	Elavl2	intron	ENSMUSG00000008489	ProperStrand	52	chr16	23111447	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.4615
chr19	58929372	58929389	protein_coding	Hspa12a	intron	ENSMUSG00000025092	NonProperStrand	17	chr4	138931922	138931938	protein_coding	C230096C10Rik	utr3	ENSMUSG00000078517	ProperStrand	69	1	-15.5934
chr6	8185634	8185650	protein_coding	Mios	utr3	ENSMUSG00000042447	NonProperStrand	40	chr4	131865866	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.4299
chr7	135048969	135049393	protein_coding	Bckdk	exon	ENSMUSG00000030802	ProperStrand	26	chr4	139020882	139021225	protein_coding	Ubr4	exon	ENSMUSG00000066036	ProperStrand	304	1	-11.7524
chrX	155547204	155547222	SINE	RSINE1	B4	chrXRSINE1155547085	NonProperStrand	1	chr17	24857625	24857671	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	1	-inf
chr8	108184198	108184265	protein_coding	Ctcf	intron	ENSMUSG00000005698	ProperStrand	75	chr10	77454823	77455160	protein_coding	Pfkl	exon	ENSMUSG00000020277	ProperStrand	179	3	-20.3641
chr17	79201039	79201091	protein_coding	Heatr5b	exon	ENSMUSG00000039414	ProperStrand	27	chr6	53769078	53769095	protein_coding	Tril	exon	ENSMUSG00000043496	NonProperStrand	17	1	-17.4194
chr4	149026816	149026832	protein_coding	Pik3cd	exon	ENSMUSG00000039936	ProperStrand	151	chr15	34370631	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-1.9490
chr2	33266286	33266376	protein_coding	Zbtb34	utr3	ENSMUSG00000068966	ProperStrand	9	chr7	29136525	29136605	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.9747
chr2	115889965	115889981	protein_coding	Meis2	utr5	ENSMUSG00000027210	NonProperStrand	8	chr2	154888062	154889522	protein_coding	Ahcy	exon	ENSMUSG00000027597	ProperStrand	18	1	-18.6388
chrX	152009278	152009294	protein_coding	Ptchd1	exon	ENSMUSG00000041552	NonProperStrand	294	chr3	108161404	108161444	protein_coding	Sort1	utr3	ENSMUSG00000068747	ProperStrand	32	1	-11.3973
chr1	87804316	87804395	protein_coding	Itm2c	utr3	ENSMUSG00000026223	ProperStrand	21	chr3	85942714	85942730	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	1	-11.8454
chr4	106873198	106873216	protein_coding	Tmem59	utr3	ENSMUSG00000028618	ProperStrand	29	chr15	81480330	81480419	protein_coding	Ep300	exon	ENSMUSG00000055024	ProperStrand	118	1	-13.4267
chr5	3952855	3952928	protein_coding-noncoding	Akap9	utr5	ENSMUSG00000040407	ProperStrand	4	chr11	68887040	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	4	-inf
chr9	15130814	15130875	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	chr11	73899410	73899427	protein_coding	Zfp616	utr3	ENSMUSG00000069476	NonProperStrand	4	1	-14.8923
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr2	22444213	22444238	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-2.6784
chr7	4615012	4615030	protein_coding	Hspbp1	exon	ENSMUSG00000063802	ProperStrand	12	chr16	23111754	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.8390
chr2	124930422	124930443	protein_coding	Myef2	intron	ENSMUSG00000027201	ProperStrand	19	chr7	116663633	116663712	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-7.7555
chr4	142858107	142858136	protein_coding	Pdpn	utr3	ENSMUSG00000028583	ProperStrand	30	chr18	35716764	35716883	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	8	-inf
chr14	52832071	52832089	protein_coding	Chd8	exon	ENSMUSG00000053754	ProperStrand	167	chr18	35714144	35714260	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-1.7018
chr15	81749729	81749824	protein_coding	Polr3h	intron	ENSMUSG00000022476	ProperStrand	11	chr15	79083392	79083409	protein_coding	Pick1	intron	ENSMUSG00000068206	ProperStrand	21	1	-18.6067
chr13	73933078	73933123	protein_coding	Slc12a7	exon	ENSMUSG00000017756	ProperStrand	80	chr1	39605657	39605696	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-6.7723
chr15	34370552	34370617	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	chr11	97631139	97631177	tRNA	tRNA1444-CysGCA	.	82705	ProperStrand	91	4	-9.8089
chr16	5256015	5256031	protein_coding	Fam86	utr5	ENSMUSG00000022544	ProperStrand	231	chr10	127995907	127995963	protein_coding	Pa2g4	utr3	ENSMUSG00000025364	ProperStrand	72	1	-10.2438
chr11	77996560	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	chr1	162966813	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	3	-1.5181
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr5	145553050	145553073	protein_coding	Trrap	exon	ENSMUSG00000045482	ProperStrand	399	1	-1.6014
chr5	52575939	52576029	protein_coding	Dhx15	exon	ENSMUSG00000029169	ProperStrand	53	chr5	111121068	111121148	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-6.6802
chr2	90744612	90744807	protein_coding	Ndufs3	utr5	ENSMUSG00000005510	ProperStrand	6	chr4	131908686	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-9.0955
chr11	120434046	120434136	protein_coding	P4hb	utr5	ENSMUSG00000025130	ProperStrand	83	chr11	68886963	68887043	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-3.5382
chr4	40163387	40163403	protein_coding	Ddx58	exon	ENSMUSG00000040296	ProperStrand	18	chr3	123210872	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	4	-13.9459
chr2	15001491	15001527	protein_coding	Arl5b	utr3	ENSMUSG00000017418	ProperStrand	55	chr11	67167096	67167112	protein_coding	Myh13	exon	ENSMUSG00000060180	ProperStrand	145	1	-11.7172
chr7	30029274	30029301	protein_coding	Yif1b	exon	ENSMUSG00000030588	ProperStrand	154	chr7	148634701	148634739	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-4.0858
chr17	35822057	35822257	protein_coding	Ddr1	exon	ENSMUSG00000003534	ProperStrand	129	chr15	79913288	79913346	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.2428
chr5	64792049	64792070	LTR	MLT1H	MaLR	chr5MLT1H64791748	NonProperStrand	30	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.9112
chr7	52124785	52124871	protein_coding	Ptov1	exon	ENSMUSG00000038502	ProperStrand	26	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-9.8650
chr2	105012751	105012769	protein_coding	Wt1	utr3	ENSMUSG00000016458	NonProperStrand	338	chr11	62418014	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-2.3606
chr11	69471656	69471746	protein_coding-noncoding	Mpdu1	utr3	ENSMUSG00000018761	ProperStrand	1	chr11	69471343	69472069	protein_coding	Mpdu1	exon	ENSMUSG00000018761	ProperStrand	11	1	-inf
chr2	86138158	86138174	protein_coding	Olfr1052	exon	ENSMUSG00000047149	NonProperStrand	119	chr8	46038093	46038205	protein_coding	Fat1	exon	ENSMUSG00000070047	ProperStrand	306	1	-8.6765
chr14	56159294	56159311	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	chr18	75161534	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-4.8829
chr2	125666068	125666123	protein_coding	Cops2	exon	ENSMUSG00000027206	ProperStrand	10	chr19	8963036	8963126	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-9.3759
chr9	62740097	62740964	protein_coding	Pias1	exon	ENSMUSG00000032405	ProperStrand	13	chr1	162966000	162966045	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-10.7546
chr13	63612936	63612952	protein_coding	Ptch1	exon	ENSMUSG00000021466	NonProperStrand	118	chr18	35714186	35714246	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-2.2556
chr13	23838991	23839062	protein_coding	Hist1h2bb	utr3	ENSMUSG00000075031	ProperStrand	27	chr1	24621081	24621126	protein_coding	Gm10925	utr3	ENSMUSG00000090378	ProperStrand	320	3	-19.9446
chr6	88843055	88843095	protein_coding	Mcm2	exon	ENSMUSG00000002870	ProperStrand	83	chr7	116663738	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.9732
chr14	35124214	35124314	protein_coding	Glud1	exon	ENSMUSG00000021794	ProperStrand	72	chr1	162965986	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-3.2691
chr2	37207523	37207590	protein_coding	Pdcl	exon	ENSMUSG00000009030	ProperStrand	32	chr5	142970826	142970916	protein_coding	Radil	exon	ENSMUSG00000029576	ProperStrand	4	1	-19.3591
chr12	3913604	3913622	protein_coding	Dnmt3a	utr3	ENSMUSG00000020661	ProperStrand	40	chr2	158185528	158185652	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-7.2928
chrX	20265759	20265831	protein_coding	Cdk16	utr5	ENSMUSG00000031065	ProperStrand	30	chr16	23110535	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.7075
chr13	54782169	54782232	protein_coding	Rnf44	utr3	ENSMUSG00000034928	ProperStrand	90	chr7	148634752	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-3.2373
chr5	8457737	8457827	LINE	L1_Mur1	L1	chr5L1_Mur18457659	NonProperStrand	1	chr5	8457916	8457996	LINE	L1_Mur1	L1	chr5L1_Mur18457824	ProperStrand	1	1	-inf
chr5	140276273	140276357	protein_coding	Mafk	exon	ENSMUSG00000018143	ProperStrand	4	chr9	15119639	15119729	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-8.0470
chr8	67552590	67552670	processed_transcript	Gm10664	.	ENSMUSG00000074303	ProperStrand	2	chr5	115695962	115696927	protein_coding	Rnf10	exon	ENSMUSG00000041740	ProperStrand	95	1	-19.6375
chr16	31788214	31790286	protein_coding	Dlg1	exon	ENSMUSG00000022770	ProperStrand	69	chr1	141319671	141319687	protein_coding	Zbtb41	utr5	ENSMUSG00000033964	NonProperStrand	145	1	-11.2609
chr15	30270233	30270253	protein_coding	Ctnnd2	intron	ENSMUSG00000022240	ProperStrand	24	chr9	64024980	64024998	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	5	-inf
chr18	34788084	34788184	protein_coding	Kif20a	exon	ENSMUSG00000003779	ProperStrand	50	chr7	118219682	118219739	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-7.5203
chr7	52263666	52263682	protein_coding	Scaf1	exon	ENSMUSG00000038406	ProperStrand	81	chr4	130305550	130305586	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	1	-9.3074
chr19	8798742	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	chr7	51505506	51505593	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	1	-0.9845
chr8	71738161	71738251	LINE	Lx5	L1	chr8Lx571738162	NonProperStrand	1	chr13	30802228	30802318	protein_coding	Dusp22	intron	ENSMUSG00000069255	ProperStrand	2	1	-inf
chr17	67712818	67712835	LTR	ORR1E	MaLR	chr17ORR1E67712788	ProperStrand	39	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.0770
chr1	24619309	24619396	protein_coding	Gm10222	exon	ENSMUSG00000067736	ProperStrand	42	chr17	13112450	13112542	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-5.2704
chr11	70219820	70223292	protein_coding	Pelp1	exon	ENSMUSG00000018921	ProperStrand	64	chr13	76193665	76193681	protein_coding	Gpr150	exon	ENSMUSG00000045509	NonProperStrand	63	2	-19.1525
chr1	137271110	137271126	protein_coding	Shisa4	exon	ENSMUSG00000041889	ProperStrand	64	chr7	117189863	117189922	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-6.0821
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	86611342	86611378	tRNA	tRNA387-ArgTCG	.	542220	ProperStrand	77	1	-3.9900
chr17	39979942	39980024	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	2	-4.3828
chr15	81415832	81415896	protein_coding	Ep300	utr5	ENSMUSG00000055024	ProperStrand	118	chr9	120039586	120039676	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.1432
chr4	129662259	129662276	protein_coding	Bai2	utr5	ENSMUSG00000028782	ProperStrand	119	chr19	8963083	8963183	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-3.7535
chr10	67560385	67560475	protein_coding	Arid5b	exon	ENSMUSG00000019947	ProperStrand	43	chr5	130300444	130300524	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.0960
chr19	31157628	31157644	protein_coding	Cstf2t	exon	ENSMUSG00000053536	ProperStrand	48	chr5	116010795	116010853	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	1	-10.5979
chr16	65335244	65335262	SINE	B1F2	Alu	chr16B1F265335213	ProperStrand	1	chr5	121655099	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-inf
chr7	88458753	88458850	protein_coding	Pde8a	intron	ENSMUSG00000025584	ProperStrand	25	chr16	23110972	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.2939
chr16	10315198	10315288	SINE	RSINE1	B4	chr16RSINE110315202	ProperStrand	1	chr12	29258645	29258735	protein_coding	Allc	intron	ENSMUSG00000020636	NonProperStrand	1	1	-inf
chr2	121129853	121129923	protein_coding	Mtap1a	exon	ENSMUSG00000027254	ProperStrand	17	chr2	26494715	26494805	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.5152
chr6	87741132	87741149	protein_coding	Rab43	utr3	ENSMUSG00000030055	ProperStrand	8	chrX	99384672	99384688	protein_coding	Rps4x	utr5	ENSMUSG00000031320	NonProperStrand	7	1	-19.5782
chr10	107800764	107800844	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	chr1	187066815	187066905	snoRNA	ENSMUSG00000077571_Snora36b	.	ENSMUSG00000077571	ProperStrand	244	2	-8.6900
chr4	151730301	151730737	protein_coding	Chd5	exon	ENSMUSG00000005045	NonProperStrand	147	chr4	116827119	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-5.2792
chr6	78952427	78952445	LTR	MTD	MaLR	chr6MTD78952426	NonProperStrand	2	chr8	119584166	119584182	protein_coding	Pkd1l2	intron	ENSMUSG00000034416	NonProperStrand	3	1	-inf
chr2	91436228	91436335	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	chr2	144091757	144091782	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	ProperStrand	549	1	-3.2365
chr1	91358413	91358430	protein_coding	Agap1	intron	ENSMUSG00000055013	ProperStrand	229	chr8	13876127	13876227	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-4.5281
chr19	45857639	45857699	protein_coding	Mgea5	utr5	ENSMUSG00000025220	ProperStrand	53	chr6	84538206	84538223	protein_coding	Cyp26b1	utr5	ENSMUSG00000063415	NonProperStrand	21	1	-15.6623
chr7	16534823	16534839	protein_coding	Ehd2	utr3	ENSMUSG00000074364	NonProperStrand	197	chr18	35714144	35714278	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-1.4567
chr13	24824232	24824248	protein_coding	Fam65b	utr3	ENSMUSG00000036006	ProperStrand	51	chr1	162965531	162965569	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.5744
chr2	172452476	172452576	SINE	B1_Mus1	Alu	chr2B1_Mus1172452441	NonProperStrand	16	chr1	162967541	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	16	-inf
chr6	52589226	52589289	snoRNA	ENSMUSG00000064792_SNORA32	.	ENSMUSG00000064792	ProperStrand	151	chr11	69483184	69483274	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.0528
chr5	110683383	110683473	protein_coding	Ankle2	exon	ENSMUSG00000029501	ProperStrand	23	chr2	26494779	26494826	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.9167
chrY	443554	443656	protein_coding	Uty	intron	ENSMUSG00000068457	ProperStrand	26	chr4	131908236	131908291	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.7765
chr4	116826464	116826973	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	chr3	123210850	123210985	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	4	-2.0039
chr1	43809434	43809550	protein_coding	Uxs1	intron	ENSMUSG00000057363	ProperStrand	9	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-18.3861
chrX	20255724	20255766	protein_coding	Uba1	exon	ENSMUSG00000001924	ProperStrand	156	chr18	33954838	33954928	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	3	-5.1826
chr7	52455717	52459963	protein_coding	Ccdc155	exon	ENSMUSG00000038292	ProperStrand	15	chr4	131826040	131826128	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	1	-12.0348
chr9	20830024	20830124	protein_coding	Icam1	exon	ENSMUSG00000037405	ProperStrand	44	chr10	23506278	23506303	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-7.5660
chrX	130830178	130830195	protein_coding	Tmem35	intron	ENSMUSG00000033578	ProperStrand	16	chr3	87743271	87743321	protein_coding	Isg20l2	utr3	ENSMUSG00000048039	ProperStrand	10	1	-19.5488
chr12	4471013	4471032	protein_coding	Ncoa1	intron	ENSMUSG00000020647	NonProperStrand	10	chr16	23109027	23109081	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-10.9330
chr16	87487813	87487893	protein_coding	Cct8	exon	ENSMUSG00000025613	ProperStrand	65	chr7	29880428	29880518	protein_coding	Ryr1	exon	ENSMUSG00000030592	ProperStrand	27	1	-14.7644
chr7	150468335	150468377	protein_coding	Kcnq1	intron	ENSMUSG00000009545	NonProperStrand	133	chr18	33954877	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-2.1150
chr2	158182156	158182180	lincRNA	9430008C03Rik	intron	ENSMUSG00000085385	ProperStrand	1039	chr12	111784032	111789292	protein_coding	Ppp2r5c	exon	ENSMUSG00000017843	ProperStrand	36	1	-8.6402
chr4	132394349	132394449	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	chr17	35089181	35089239	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-1.7279
chr4	151704200	151706409	protein_coding	Rpl22	exon	ENSMUSG00000028936	ProperStrand	112	chr17	23965882	23965900	protein_coding	Tceb2	exon	ENSMUSG00000055839	ProperStrand	12	1	-15.3458
chr7	80649889	80649979	protein_coding	Chd2	exon	ENSMUSG00000078671	ProperStrand	69	chr12	110874223	110874290	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	1	-9.6970
chr1	132742959	132742975	protein_coding	Pigr	exon	ENSMUSG00000026417	NonProperStrand	48	chr11	97642952	97643074	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.8600
chr17	13112449	13112554	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	chr17	24856620	24856710	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	8	-2.8946
chr14	54987848	54988022	protein_coding	Oxa1l	exon	ENSMUSG00000000959	ProperStrand	31	chr7	116664815	116664895	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	5	-15.8503
chr1	129151288	129151353	protein_coding	Mgat5	intron	ENSMUSG00000036155	ProperStrand	33	chr8	73419657	73419712	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-7.1166
chr17	46663594	46663610	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr11	69266813	69266829	protein_coding	Dnahc2	exon	ENSMUSG00000005237	ProperStrand	95	1	-8.3108
chr9	64025168	64025193	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	chr8	74446729	74446745	protein_coding	Zfp617	intron	ENSMUSG00000066880	NonProperStrand	208	1	-6.2117
chr8	80206657	80206673	lincRNA	4933431K23Rik	intron	ENSMUSG00000086451	ProperStrand	4	chr10	23505222	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-6.2798
chr15	77745794	77745849	protein_coding	Txn2	utr3	ENSMUSG00000005354	ProperStrand	82	chr18	34880002	34880019	protein_coding	Gfra3	utr5	ENSMUSG00000024366	ProperStrand	41	1	-13.4557
chr11	69726835	69726853	protein_coding	Neurl4	utr3	ENSMUSG00000047284	ProperStrand	28	chr19	8799581	8799641	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-8.2931
chr1	182834895	182834943	protein_coding	Pycr2	exon	ENSMUSG00000026520	ProperStrand	89	chr4	131908809	131908891	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.7386
chrX	71196629	71196719	protein_coding	Hcfc1	exon	ENSMUSG00000031386	ProperStrand	424	chr8	47293826	47294389	protein_coding	Slc25a4	exon	ENSMUSG00000031633	ProperStrand	53	1	-9.6467
chr5	107986974	107986999	protein_coding	Glmn	exon	ENSMUSG00000029276	ProperStrand	8	chr16	23111732	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-9.4467
chr1	162966175	162966196	non_coding	Gas5	.	ENSMUSG00000053332	ProperStrand	144	chr7	116664819	116664886	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.1908
chr11	5180669	5180685	protein_coding	Znrf3	utr3	ENSMUSG00000041961	NonProperStrand	210	chr9	15119633	15119762	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-0.7840
chr8	48196203	48196220	LTR	RMER15	ERVL	chr8RMER1548195836	ProperStrand	1	chr6	83111671	83111687	protein_coding	1700003E16Rik	exon	ENSMUSG00000030030	ProperStrand	352	1	-inf
chr7	35996811	35996833	protein_coding	Lrp3	intron	ENSMUSG00000001802	ProperStrand	17	chr9	78326948	78327154	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-8.8712
chr2	172600516	172600535	SINE	PB1D9	Alu	chr2PB1D9172600443	NonProperStrand	1	chr17	39985622	39985693	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-inf
chr17	57202060	57202077	protein_coding	Crb3	utr5	ENSMUSG00000044279	ProperStrand	11	chr9	15119968	15120041	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-10.7037
chr12	99497602	99497618	protein_coding	Galc	utr5	ENSMUSG00000021003	NonProperStrand	65	chr5	115575230	115575299	protein_coding	Unc119b	utr3	ENSMUSG00000046562	ProperStrand	20	1	-15.3829
chr15	34413970	34414072	protein_coding	Hrsp12	utr3	ENSMUSG00000022323	ProperStrand	6	chr10	116488211	116488229	protein_coding	Cct2	utr3	ENSMUSG00000034024	ProperStrand	100	6	-inf
chr17	31640574	31640590	protein_coding	Wdr4	exon	ENSMUSG00000024037	NonProperStrand	18	chr11	6428035	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	4	-17.1159
chr10	41250031	41250051	protein_coding	Cd164	utr3	ENSMUSG00000019818	ProperStrand	38	chr16	23111416	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.9421
chr17	87833206	87833288	protein_coding	Calm2	utr3	ENSMUSG00000036438	ProperStrand	59	chr3	95980309	95980399	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	2	-11.1034
chr7	52248388	52248420	protein_coding	Bcl2l12	intron	ENSMUSG00000003190	ProperStrand	4	chr11	69483198	69483287	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-13.0469
chr4	132849427	132849443	protein_coding	Wdtc1	utr3	ENSMUSG00000037622	NonProperStrand	14	chr17	13184993	13185013	protein_coding	Wtap	utr5	ENSMUSG00000060475	ProperStrand	119	1	-14.9090
chr2	155392597	155393438	protein_coding	Gss	exon	ENSMUSG00000027610	ProperStrand	5	chr7	65071771	65071788	protein_coding	Gabrb3	exon	ENSMUSG00000033676	NonProperStrand	4	1	-20.9004
chr1	171428946	171429023	protein_coding	Nuf2	exon	ENSMUSG00000026683	ProperStrand	4	chr7	13846528	13846544	protein_coding	6330408A02Rik	utr3	ENSMUSG00000070814	NonProperStrand	5	1	-20.6224
chr14	96988139	96988178	snoRNA	ENSMUSG00000064581_SNORA30	.	ENSMUSG00000064581	ProperStrand	146	chr3	123210854	123210954	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-1.6584
chr3	107769066	107769101	protein_coding	Gstm3	exon	ENSMUSG00000004038	ProperStrand	10	chr17	26360453	26360543	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	1	-13.6964
chr15	27832308	27832324	protein_coding	Trio	exon	ENSMUSG00000022263	ProperStrand	108	chr8	72287172	72287188	protein_coding	Zfp866	utr3	ENSMUSG00000043090	NonProperStrand	134	1	-10.5196
chr1	89105750	89105766	protein_coding	Chrng	exon	ENSMUSG00000026253	NonProperStrand	130	chr11	6428088	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.8755
chr10	53332751	53335750	protein_coding	Mcm9	exon	ENSMUSG00000058298	ProperStrand	24	chr7	52381974	52382010	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-8.5501
chr7	29073210	29073330	protein_coding	BC089491	exon	ENSMUSG00000046750	ProperStrand	62	chr16	23110455	23110477	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.4059
chr10	23505559	23505626	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	chr5	130300419	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	11	-1.9201
chr15	99610675	99610733	protein_coding	Lima1	utr3	ENSMUSG00000023022	ProperStrand	159	chr4	3762227	3762256	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	1	-7.5429
chr18	36910796	36910866	protein_coding	Ik	exon	ENSMUSG00000024474	ProperStrand	60	chr5	130300494	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.5095
chr13	9833560	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr2	26767090	26767637	protein_coding	Rpl7a	exon	ENSMUSG00000062647	ProperStrand	234	1	-2.4548
chr12	80276977	80276993	protein_coding	Rdh11	utr3	ENSMUSG00000066441	NonProperStrand	23	chr7	17470996	17471016	protein_coding	Dact3	exon	ENSMUSG00000078794	NonProperStrand	1	1	-inf
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr9	103401280	103401296	protein_coding	Tmem108	exon	ENSMUSG00000042757	NonProperStrand	323	2	-8.6370
chr14	78907685	78909710	protein_coding	Akap11	exon	ENSMUSG00000022016	ProperStrand	44	chr4	131908236	131908336	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.8887
chr10	125419941	125419958	protein_coding	Lrig3	intron	ENSMUSG00000020105	NonProperStrand	13	chr17	35960302	35960319	protein_coding	Flot1	utr5	ENSMUSG00000059714	ProperStrand	8	1	-19.3777
chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr1	63225262	63225322	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	2	-5.8106
chr7	116663738	116663771	protein_coding-noncoding	Rpl27a	utr5	ENSMUSG00000046364	ProperStrand	57	chr19	8963027	8963127	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.3610
chr18	46767500	46767541	protein_coding	Eif1a	exon	ENSMUSG00000057561	ProperStrand	44	chr4	131908808	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-8.9188
chr5	149860359	149860424	protein_coding	Hmgb1	exon	ENSMUSG00000066551	ProperStrand	99	chr12	106269339	106269429	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-3.2133
chr2	72775276	72775375	protein_coding	Sp3	utr3	ENSMUSG00000027109	ProperStrand	11	chr1	91358413	91358430	protein_coding	Agap1	intron	ENSMUSG00000055013	ProperStrand	229	2	-inf
chr8	67785118	67785135	LINE	L1_Mur3	L1	chr8L1_Mur367784344	NonProperStrand	5	chr2	26494796	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-8.0805
chr1	183107658	183107758	protein_coding	Wdr26	utr3	ENSMUSG00000038733	ProperStrand	9	chr4	131908689	131908748	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.5343
chr7	36388906	36389233	protein_coding	Ankrd27	exon	ENSMUSG00000034867	ProperStrand	132	chr9	78327873	78327913	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-4.7967
chr10	42079133	42079223	protein_coding	Lace1	intron	ENSMUSG00000038302	ProperStrand	12	chr10	23505179	23505259	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.9771
chr2	32540286	32540846	protein_coding	Fpgs	exon	ENSMUSG00000009566	ProperStrand	8	chr7	116664832	116664922	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-6.4335
chr2	152695417	152695457	protein_coding	Tpx2	exon	ENSMUSG00000027469	ProperStrand	111	chr19	8963084	8963174	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.3249
chr17	24215530	24215621	protein_coding	Pdpk1	utr3	ENSMUSG00000024122	ProperStrand	18	chr16	23111374	23111454	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.2408
chr7	51828028	51828044	protein_coding	Napsa	exon	ENSMUSG00000002204	ProperStrand	88	chr2	158182180	158182277	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-4.2685
chrX	34336932	34336954	protein_coding	Slc25a5	exon	ENSMUSG00000016319	ProperStrand	55	chr5	130295414	130295492	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-5.4181
chr19	6052630	6052730	protein_coding	Syvn1	utr3	ENSMUSG00000024807	ProperStrand	6	chr16	23110913	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.7876
chr3	144829868	144829885	SINE	B3A	B2	chr3B3A144829826	ProperStrand	4	chr1	180260774	180260809	protein_coding	Hnrnpu	exon	ENSMUSG00000039630	ProperStrand	286	1	-15.8608
chr1	71652500	71652600	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr10	80641693	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	2	-4.1742
chr8	123197200	123197228	protein_coding	Cox4i1	exon	ENSMUSG00000031818	ProperStrand	31	chr7	148634702	148634792	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	4	-16.3743
chr11	117828359	117828449	protein_coding	Socs3	utr3	ENSMUSG00000053113	ProperStrand	137	chr7	117189944	117190024	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-1.9150
chr11	70207536	70207609	protein_coding	Pelp1	exon	ENSMUSG00000018921	ProperStrand	64	chr1	72871098	72871181	protein_coding	Igfbp2	utr5	ENSMUSG00000039323	ProperStrand	406	1	-9.3543
chr2	152656290	152656306	protein_coding	Bcl2l1	utr5	ENSMUSG00000007659	NonProperStrand	29	chr10	127015766	127018824	protein_coding	Lrp1	exon	ENSMUSG00000040249	ProperStrand	151	1	-12.9319
chr19	23334197	23334218	protein_coding	Smc5	exon	ENSMUSG00000024943	ProperStrand	146	chr17	35299507	35299641	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	4	-10.6278
chr5	74489202	74489282	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr5	106242732	106242822	protein_coding	Lrrc8d	exon	ENSMUSG00000046079	ProperStrand	40	1	-6.4218
chr13	59077534	59077551	protein_coding	Ntrk2	intron	ENSMUSG00000055254	ProperStrand	22	chr5	130300419	130300476	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.3511
chr16	64851346	64851368	Simple_repeat	(CCG)n	Simple_repeat	chr16(CCG)n64851329	NonProperStrand	15	chr5	122032201	122032217	protein_coding	Aldh2	intron	ENSMUSG00000029455	NonProperStrand	4	1	-26.3461
chr10	53312730	53312751	protein_coding	Mcm9	intron	ENSMUSG00000058298	ProperStrand	24	chr8	112363235	112363275	snoRNA	ENSMUSG00000077549_Snord71	.	ENSMUSG00000077549	ProperStrand	196	1	-12.7951
chr4	116826536	116827690	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	chr17	24857718	24857830	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-0.8799
chr18	56902946	56907654	protein_coding	Lmnb1	exon	ENSMUSG00000024590	ProperStrand	176	chr17	30772308	30772324	protein_coding	Dnahc8	utr5	ENSMUSG00000033826	ProperStrand	246	1	-8.3307
chr14	52910444	52910487	protein_coding	Tox4	exon	ENSMUSG00000016831	ProperStrand	16	chr11	69483136	69483243	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.9072
chr10	62268123	62268170	protein_coding	Tet1	utr3	ENSMUSG00000047146	ProperStrand	286	chr4	143486645	143486661	protein_coding	Pramef6	exon	ENSMUSG00000078512	ProperStrand	21	1	-12.3112
chr2	26451900	26451952	protein_coding	Agpat2	exon	ENSMUSG00000026922	ProperStrand	18	chr17	24857753	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-7.5514
chr19	8971174	8971264	protein_coding	Ints5	exon	ENSMUSG00000071652	ProperStrand	6	chr9	64143737	64143817	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-12.5244
chr5	138705399	138705444	lincRNA	6330418K02Rik	intron	ENSMUSG00000085227	ProperStrand	6	mmu-miR-6238	1	20	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	1	-15.2922
chr1	182683352	182683417	protein_coding	Acbd3	utr3	ENSMUSG00000026499	ProperStrand	67	chr19	8799596	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	4	-18.9988
chr15	36643581	36643661	LTR	RMER13A	ERVK	chr15RMER13A36642888	NonProperStrand	1	chr15	36644046	36644136	SINE	B3	B2	chr15B336643951	ProperStrand	1	1	-inf
chr5	66198481	66198571	protein_coding	N4bp2	exon	ENSMUSG00000037795	ProperStrand	30	chr7	116663652	116663732	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.7620
chr1	93743979	93743995	protein_coding	Twist2	utr3	ENSMUSG00000007805	ProperStrand	21	chr4	131908357	131908414	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.1622
chr19	6375748	6375860	protein_coding	Sf1	exon	ENSMUSG00000024949	ProperStrand	251	chr2	26768410	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-2.9122
chr5	38622052	38622082	protein_coding	Lyar	exon	ENSMUSG00000067367	ProperStrand	33	chr4	131866241	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-4.8017
chr6	25638699	25638715	protein_coding	Gpr37	exon	ENSMUSG00000039904	ProperStrand	49	chr11	106362641	106362670	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-7.8090
chr10	20080841	20080858	protein_coding	Fam54a	utr3	ENSMUSG00000019992	ProperStrand	232	chr1	162965981	162966009	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-1.3486
chr11	95867166	95867192	protein_coding	Igf2bp1	utr5	ENSMUSG00000013415	ProperStrand	140	chr7	108971290	108971306	protein_coding	Inppl1	utr3	ENSMUSG00000032737	ProperStrand	272	1	-8.5867
chr7	31895791	31899711	protein_coding	Hpn	utr5	ENSMUSG00000001249	ProperStrand	126	chr6	35165161	35169690	protein_coding	Nup205	exon	ENSMUSG00000038759	ProperStrand	56	1	-11.9627
chr12	56451108	56451158	protein_coding	1110008L16Rik	intron	ENSMUSG00000021023	ProperStrand	20	chr5	121655052	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.8755
chr3	66100724	66100740	protein_coding	Veph1	utr5	ENSMUSG00000027831	NonProperStrand	92	chr7	116663674	116663692	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.8106
chr4	131908681	131908703	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr3	157680838	157682344	protein_coding	Srsf11	exon	ENSMUSG00000055436	ProperStrand	46	2	-12.4644
chr9	120038468	120038643	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	chr7	52378421	52378482	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	4	-1.0684
chr14	70954660	70954676	protein_coding	Hr	utr5	ENSMUSG00000022096	ProperStrand	7	chr2	32818886	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-9.8490
chr11	51464192	51464208	protein_coding	N4bp3	utr5	ENSMUSG00000001053	NonProperStrand	41	chr11	98878344	98878454	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-7.0409
chr14	71166322	71166338	protein_coding	Xpo7	utr5	ENSMUSG00000022100	ProperStrand	109	chr7	130363535	130363558	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	1	-11.3669
chr7	13610375	13610688	protein_coding	Trim28	exon	ENSMUSG00000005566	ProperStrand	296	chr2	158182156	158182192	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-2.1062
chr14	45755608	45760122	protein_coding	Txndc16	exon	ENSMUSG00000021830	ProperStrand	4	chr16	23110965	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.6489
chr11	116124592	116126746	protein_coding	Srp68	exon	ENSMUSG00000020780	ProperStrand	42	chr7	119934438	119934484	protein_coding	Tead1	intron	ENSMUSG00000055320	ProperStrand	217	4	-21.3194
chr4	59034864	59034885	protein_coding	Dnajc25	intron	ENSMUSG00000070972	NonProperStrand	4	chr2	26768382	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	2	-17.9485
chr15	76018903	76018919	protein_coding	Plec	exon	ENSMUSG00000022565	ProperStrand	186	chr9	30976462	30978082	protein_coding	Aplp2	exon	ENSMUSG00000031996	ProperStrand	172	1	-8.9335
chr1	38076011	38076101	protein_coding	Eif5b	exon	ENSMUSG00000026083	ProperStrand	118	chr11	68886948	68887028	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-2.9032
chr14	66166798	66166898	protein_coding	Elp3	exon	ENSMUSG00000022031	ProperStrand	71	chr10	23506278	23506346	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-6.6136
chr19	20859213	20859230	protein_coding	Tmc1	utr3	ENSMUSG00000024749	NonProperStrand	8	chr7	116663640	116663749	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	NonProperStrand	51	1	-17.7897
chr15	82009158	82009174	protein_coding	Srebf2	exon	ENSMUSG00000022463	ProperStrand	592	chr2	138188029	138188045	protein_coding	Btbd3	intron	ENSMUSG00000062098	NonProperStrand	121	1	-7.3334
chr16	33517465	33517546	protein_coding	Slc12a8	utr5	ENSMUSG00000035506	ProperStrand	52	chr4	131866158	131866215	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	3	-9.6216
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr2	22444176	22444236	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	2	-2.0826
chr5	138200372	138200427	protein_coding	Tsc22d4	exon	ENSMUSG00000029723	ProperStrand	24	chr16	23111704	23111772	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.4982
chr13	25455244	25455267	LTR	MTC	MaLR	chr13MTC25454978	NonProperStrand	1	chr7	116664848	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-inf
chr6	99336466	99336553	sense_intronic	RP23-333F8.1	.	ENSMUSG00000093559	ProperStrand	3	chr4	131866193	131866283	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	3	-inf
chr12	17555232	17555371	protein_coding	Odc1	exon	ENSMUSG00000011179	ProperStrand	173	chr11	78150285	78150301	protein_coding	Pigs	exon	ENSMUSG00000041958	NonProperStrand	138	1	-9.5181
chr18	35714261	35714291	lincRNA	Snhg4	intron	ENSMUSG00000090430	ProperStrand	270	chrX	160347488	160347504	protein_coding	Ap1s2	intron	ENSMUSG00000031367	ProperStrand	52	1	-10.5863
chr5	115940313	115940407	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	chr9	15118246	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	6	-3.8804
chr18	24444027	24444117	protein_coding	Galnt1	utr3	ENSMUSG00000000420	ProperStrand	158	chr3	108357494	108357574	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-2.7578
chrX	151647881	151647939	protein_coding	Sat1	utr3	ENSMUSG00000025283	ProperStrand	4	chr19	8799373	8799433	snoRNA	ENSMUSG00000065280_SNORD28	.	ENSMUSG00000065280	ProperStrand	269	2	-19.8663
chr2	137801935	137801956	LTR	MTE2a	MaLR	chr2MTE2a137801742	NonProperStrand	1	chr11	68886962	68887008	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-inf
chr5	34693474	34693530	protein_coding	Rnf4	intron	ENSMUSG00000029110	ProperStrand	27	chr1	165892217	165892241	protein_coding	BC055324	intron	ENSMUSG00000041406	ProperStrand	35	1	-16.0264
chr7	67123694	67123711	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	chr5	108336363	108336432	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-2.8987
mmu-miR-3535	0	17	miRNA	mmu-miR-3535	.	mmu-miR-3535	ProperStrand	15	chr11	69483136	69483240	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	6	-inf
chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr4	41150095	41150159	snoRNA	ENSMUSG00000089265_SNORD121A	.	ENSMUSG00000089265	ProperStrand	370	5	-4.3829
chr2	166890502	166890556	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	chr13	22011123	22011168	tRNA	tRNA86-SerAGA	.	417192	ProperStrand	33	1	-8.7572
chr3	96528196	96528296	snoRNA	ENSMUSG00000065669_SNORA5	.	ENSMUSG00000065669	ProperStrand	180	chr11	62416954	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-3.9283
chr11	69486993	69487118	protein_coding	Senp3	utr3	ENSMUSG00000005204	ProperStrand	65	chr5	121655105	121655128	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.5991
chr9	78023109	78023152	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr8	125627095	125627179	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	2	-5.6572
chr1	14908903	14908919	protein_coding	Trpa1	utr5	ENSMUSG00000032769	ProperStrand	24	chr10	126460898	126460963	protein_coding	Tsfm	intron	ENSMUSG00000040521	ProperStrand	7	1	-inf
chr5	115939529	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr18	75161138	75161173	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	7	-19.4891
chr9	110274841	110275488	protein_coding	Scap	exon	ENSMUSG00000032485	ProperStrand	37	chrX	34622991	34623037	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-4.0674
chr5	143666217	143666257	protein_coding	Actb	exon	ENSMUSG00000029580	ProperStrand	446	chr1	88248600	88248638	snoRNA	ENSMUSG00000064696_SNORD20	.	ENSMUSG00000064696	ProperStrand	89	1	-8.5069
chr16	16883604	16884379	protein_coding	Top3b	exon	ENSMUSG00000022779	ProperStrand	36	chrX	34622906	34622930	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-4.1194
chr11	6519810	6519940	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	chr4	131865855	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	30	-14.7235
chr4	140121137	140121153	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	chr16	23111742	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-1.5978
chr14	45949538	45949554	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	chr5	121655100	121655129	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-1.0014
chr9	85637591	85637607	protein_coding	Ibtk	utr5	ENSMUSG00000035941	NonProperStrand	22	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-10.9562
chr1	59539683	59539700	protein_coding	Fzd7	utr5	ENSMUSG00000041075	ProperStrand	373	chr11	62418014	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	2	-3.9173
chr7	112957637	112957661	protein_coding	Mrpl17	utr3	ENSMUSG00000030879	ProperStrand	9	chr9	107673007	107673024	protein_coding	Rbm5	intron	ENSMUSG00000032580	NonProperStrand	38	1	-17.7863
chr4	137167656	137212173	protein_coding	Usp48	utr3	ENSMUSG00000043411	ProperStrand	135	chr4	131908809	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-0.8221
chr17	65016105	65016195	protein_coding	Man2a1	exon	ENSMUSG00000024085	ProperStrand	20	chr2	26493423	26493498	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-5.8702
chr2	160587109	160587189	protein_coding	Plcg1	exon	ENSMUSG00000016933	ProperStrand	65	chr14	76247732	76247835	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	18	-20.5280
chr6	112689098	112689322	protein_coding	Srgap3	exon	ENSMUSG00000030257	NonProperStrand	208	chr2	158182201	158182276	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-2.6996
chr7	28146782	28146798	protein_coding	Spnb4	exon	ENSMUSG00000011751	NonProperStrand	84	chr8	77742558	77742574	protein_coding	Rasd2	exon	ENSMUSG00000034472	NonProperStrand	237	1	-9.8831
chr2	75500056	75500101	protein_coding	Hnrnpa3	exon	ENSMUSG00000059005	ProperStrand	289	chr8	112363246	112363275	snoRNA	ENSMUSG00000077549_Snord71	.	ENSMUSG00000077549	ProperStrand	196	1	-7.7966
chr18	10052131	10052153	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr19	8798743	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	6	-7.9000
chr5	107066703	107066720	protein_coding	Zfp644	exon	ENSMUSG00000049606	ProperStrand	35	chr4	58849082	58849109	protein_coding	AI314180	exon	ENSMUSG00000050812	ProperStrand	19	1	-16.7362
chr5	115263854	115263870	protein_coding	1500011B03Rik	exon	ENSMUSG00000072694	ProperStrand	3	chr9	120038552	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-9.2011
chr10	23770362	23770378	protein_coding	Taar7f	exon	ENSMUSG00000060825	NonProperStrand	40	chr7	29136525	29136573	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.0737
chr2	73434618	73434684	antisense	Gm13704	.	ENSMUSG00000086544	NonProperStrand	53	chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	2	-10.8189
chr7	52711696	52711796	protein_coding	Gys1	utr3	ENSMUSG00000003865	ProperStrand	28	chr19	8963025	8963084	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.6314
chr9	78326818	78326918	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr2	32081226	32081266	protein_coding	Prrc2b	intron	ENSMUSG00000039262	ProperStrand	344	1	-3.0177
chr12	3968611	3968627	protein_coding	Efr3b	exon	ENSMUSG00000020658	ProperStrand	142	chr4	43271331	43271376	protein_coding	Unc13b	exon	ENSMUSG00000028456	ProperStrand	29	1	-13.0580
chr9	21077015	21077034	protein_coding	Atg4d	intron	ENSMUSG00000002820	NonProperStrand	3	chrX	98643300	98643342	protein_coding	Nono	utr3	ENSMUSG00000031311	ProperStrand	102	1	-18.7863
chr4	154986483	154986573	lincRNA	Gm16023	intron	ENSMUSG00000086682	ProperStrand	25	chr4	154982886	154982976	protein_coding	Slc35e2	intron	ENSMUSG00000042202	ProperStrand	6	1	-19.4354
chr11	116535465	116535535	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr17	39985154	39985292	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	6	-3.2548
chr2	166889303	166889360	protein_coding-noncoding	1500012F01Rik	utr5	ENSMUSG00000074578	ProperStrand	2	chr1	162967515	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-10.7784
chr2	47962755	47962773	lincRNA	Gm13481	intron	ENSMUSG00000086353	NonProperStrand	36	chr7	52382364	52382433	protein_coding	Rpl13a	exon	ENSMUSG00000074129	ProperStrand	269	1	-11.3365
chr3	117489581	117489597	protein_coding	Snx7	intron	ENSMUSG00000028007	NonProperStrand	3	chr18	39344942	39344961	protein_coding	Arhgap26	intron	ENSMUSG00000036452	ProperStrand	46	1	-20.7677
chr15	8586026	8586043	protein_coding	Slc1a3	utr3	ENSMUSG00000005360	NonProperStrand	5	chr11	69481372	69481433	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-8.1843
chr4	3512284	3512303	protein_coding	Tgs1	exon	ENSMUSG00000028233	ProperStrand	10	chr10	127521219	127521276	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	2	-19.8344
chr1	134963003	134963050	protein_coding	Pik3c2b	exon	ENSMUSG00000026447	ProperStrand	24	chr19	8798739	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	5	-inf
chr6	49776434	49776451	protein_coding	Npy	intron	ENSMUSG00000029819	NonProperStrand	1	chr1	90598741	90598757	protein_coding	Arl4c	utr5	ENSMUSG00000049866	ProperStrand	25	1	-inf
chr1	53409486	53409502	protein_coding	Asnsd1	utr5	ENSMUSG00000026095	NonProperStrand	105	chr5	121655099	121655144	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.7361
chr7	119934431	119934484	protein_coding	Tead1	intron	ENSMUSG00000055320	ProperStrand	217	chr16	23111730	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	12	-13.3264
chr9	20833009	20833063	protein_coding	Icam1	utr3	ENSMUSG00000037405	ProperStrand	44	chr16	43886794	43886850	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	4	-inf
chr10	118297088	118297110	protein_coding	Dyrk2	exon	ENSMUSG00000028630	ProperStrand	1	chr9	120038622	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-inf
chr12	56404496	56404554	protein_coding	1110008L16Rik	utr5	ENSMUSG00000021023	ProperStrand	20	chr11	69483182	69483272	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.4692
chr10	61329160	61330213	protein_coding	Col13a1	exon	ENSMUSG00000058806	ProperStrand	120	chr14	31984996	31985012	protein_coding	Tnnc1	intron	ENSMUSG00000091898	ProperStrand	9	1	-15.8008
chr5	10219637	10219654	LINE	L1MA8	L1	chr5L1MA810218912	ProperStrand	4	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.0048
chr7	137768476	137768529	protein_coding	Tacc2	exon	ENSMUSG00000030852	ProperStrand	95	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-7.2632
chr14	121565898	121565915	protein_coding	Farp1	intron	ENSMUSG00000025555	ProperStrand	18	chr6	115757992	115758127	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-7.8760
chrX	131557686	131557702	processed_transcript	3632454L22Rik	.	ENSMUSG00000089759	NonProperStrand	4	chr17	13112465	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	2	-16.5315
chr11	9030493	9030564	protein_coding	Upp1	intron	ENSMUSG00000020407	ProperStrand	73	chr1	24621530	24621555	protein_coding	Gm10925	utr5	ENSMUSG00000090378	ProperStrand	320	1	-9.5651
chr10	75175257	75175304	protein_coding	Cabin1	intron	ENSMUSG00000020196	ProperStrand	62	chr5	130300496	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.4535
chr2	20781742	20781775	protein_coding	Arhgap21	intron	ENSMUSG00000036591	ProperStrand	49	chr3	95980322	95980412	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-7.2606
chr8	113628023	113628142	protein_coding	Pdpr	intron	ENSMUSG00000033624	ProperStrand	49	chr3	121381031	121381048	protein_coding	4930432M17Rik	intron	ENSMUSG00000074248	NonProperStrand	33	3	-20.1040
chr13	22127739	22127792	protein_coding	Hist1h2bk	utr5	ENSMUSG00000062727	ProperStrand	16	chr5	113302570	113302917	protein_coding	Myo18b	exon	ENSMUSG00000072720	ProperStrand	48	2	-22.4652
chr14	30973363	30973443	protein_coding	Cacna1d	intron	ENSMUSG00000015968	ProperStrand	16	chr1	52155596	52155686	protein_coding	Stat4	intron	ENSMUSG00000062939	ProperStrand	6	1	-19.5178
chr12	68768910	68768990	LINE	L1Md_F2	L1	chr12L1Md_F268768613	ProperStrand	13	chr10	66497917	66498007	protein_coding	Reep3	intron	ENSMUSG00000019873	ProperStrand	11	1	-19.3750
chr2	26768049	26768080	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	chr17	35089183	35089227	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-1.1910
chr1	36845763	36845843	SINE	B1_Mur4	Alu	chr1B1_Mur436845716	NonProperStrand	1	chr1	36845455	36845545	SINE	B3A	B2	chr1B3A36845459	NonProperStrand	1	1	-inf
chr7	80574788	80574868	protein_coding	Chd2	exon	ENSMUSG00000078671	ProperStrand	69	chr11	69481339	69481429	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-2.9499
chr3	96364565	96364655	lincRNA	Gm15441	intron	ENSMUSG00000074398	ProperStrand	24	chr9	69335442	69335865	protein_coding	Anxa2	exon	ENSMUSG00000032231	ProperStrand	43	1	-15.8720
chr2	90235294	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	58682398	58682491	protein_coding	2810021J22Rik	utr5	ENSMUSG00000020491	ProperStrand	162	3	-6.8793
chr4	117950296	117950313	protein_coding	Ptprf	intron	ENSMUSG00000033295	ProperStrand	337	chr2	144087323	144087453	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-3.2469
chr9	114503421	114503462	protein_coding	Cnot10	intron	ENSMUSG00000056167	ProperStrand	16	chr5	108334210	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	3	-16.8835
chr2	32818883	32818943	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	chr11	6520359	6520449	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	3	-2.5975
chr10	89206916	89206940	SINE	B4A	B4	chr10B4A89206793	NonProperStrand	1	chr5	130300479	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-inf
chr15	29157258	29157274	LINE	Lx8	L1	chr15Lx829156540	ProperStrand	19	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.7782
mmu-miR-6240	2	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr6	145764118	145764134	protein_coding	Rassf8	exon	ENSMUSG00000030259	ProperStrand	23	1	-7.8177
chr3	157826919	157826935	protein_coding	Lrrc7	exon	ENSMUSG00000028176	NonProperStrand	13	chr19	8963117	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.1201
chr13	58227685	58229274	protein_coding	Hnrnpa0	exon	ENSMUSG00000007836	ProperStrand	110	chr18	35716740	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	5	-7.2198
chr9	119248871	119248887	protein_coding	Myd88	exon	ENSMUSG00000032508	NonProperStrand	1	chr9	120037993	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-inf
chr18	73693164	73693192	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr2	158182156	158182280	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	6	-0.8891
chr15	37913897	37915640	protein_coding	Ubr5	exon	ENSMUSG00000037487	ProperStrand	258	chr7	134729067	134729084	protein_coding	Gm166	intron	ENSMUSG00000057176	ProperStrand	22	1	-12.4227
chr14	121404823	121404840	LINE	Lx9	L1	chr14Lx9121404776	ProperStrand	1	chr10	93128290	93128306	protein_coding	Ntn4	intron	ENSMUSG00000020019	ProperStrand	8	1	-inf
chr4	46508044	46508134	snoRNA	ENSMUSG00000064410_SNORA36	.	ENSMUSG00000064410	ProperStrand	133	chr4	131908363	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-2.8293
chr11	61545010	61562567	protein_coding	Prpsap2	exon	ENSMUSG00000020528	ProperStrand	18	chr17	13112511	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	5	-19.3034
chr11	106362673	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	chr15	69516001	69516048	snoRNA	ENSMUSG00000080689_SNORA79	.	ENSMUSG00000080689	ProperStrand	7	1	-11.8180
chr9	30235085	30235101	protein_coding	Snx19	exon	ENSMUSG00000031993	ProperStrand	353	chr10	50473863	50486974	protein_coding	Ascc3	exon	ENSMUSG00000038774	ProperStrand	10	3	-inf
chr9	106336873	106337059	protein_coding	Acy1	exon	ENSMUSG00000023262	ProperStrand	9	chr11	95137125	95137167	protein_coding	Myst2	utr3	ENSMUSG00000038909	ProperStrand	56	1	-17.2395
chrX	106290968	106345261	protein_coding	Sh3bgrl	exon	ENSMUSG00000031246	ProperStrand	9	chr11	106362333	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-9.6932
chr4	147473009	147475509	protein_coding	2610109H07Rik	utr3	ENSMUSG00000029005	NonProperStrand	46	chr16	23110828	23110879	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.2288
chr2	179322377	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr2	26451868	26451884	protein_coding	Gm20532	intron	ENSMUSG00000092356	ProperStrand	46	1	-11.7477
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr8	46439259	46439275	protein_coding	Fam149a	exon	ENSMUSG00000070044	ProperStrand	57	1	-9.0296
chr2	121079385	121079402	protein_coding	Trp53bp1	exon	ENSMUSG00000043909	ProperStrand	45	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-9.5049
chr4	131399489	131399505	protein_coding	Mecr	exon	ENSMUSG00000028910	NonProperStrand	109	chr7	117166761	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	2	-6.2355
chr1	133721859	133721949	LINE	L1ME3A	L1	chr1L1ME3A133721713	ProperStrand	1	chr1	133721970	133722060	SINE	B1_Mur1	Alu	chr1B1_Mur1133721948	NonProperStrand	1	1	-inf
chr2	105012751	105012769	protein_coding	Wt1	utr3	ENSMUSG00000016458	NonProperStrand	338	chr17	35089182	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	4	-8.3969
chr2	160583723	160583813	protein_coding	Plcg1	exon	ENSMUSG00000016933	ProperStrand	65	chr4	131865390	131865470	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	3	-9.4406
chr1	71623364	71624389	protein_coding	Atic	exon	ENSMUSG00000026192	ProperStrand	30	chr11	97546405	97546421	protein_coding	Mllt6	utr3	ENSMUSG00000038437	ProperStrand	110	1	-13.5024
chr17	4082105	4082164	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr6	8185634	8185650	protein_coding	Mios	utr3	ENSMUSG00000042447	NonProperStrand	40	1	-10.7825
chr6	120884227	120884295	protein_coding	Mical3	utr3	ENSMUSG00000051586	ProperStrand	104	chr2	163470838	163470854	protein_coding	0610039K10Rik	utr5	ENSMUSG00000058812	ProperStrand	1	1	-inf
chr4	151767924	151768399	protein_coding	Kcnab2	exon	ENSMUSG00000028931	ProperStrand	22	chr8	11782626	11785720	protein_coding	Arhgef7	exon	ENSMUSG00000031511	ProperStrand	38	1	-16.2705
chr9	59170556	59170574	protein_coding	Bbs4	utr3	ENSMUSG00000025235	NonProperStrand	17	chr12	106269283	106269383	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	11	-20.8761
chr1	130159454	130159492	protein_coding	Ubxn4	exon	ENSMUSG00000026353	ProperStrand	19	chr10	23505177	23505267	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.1073
chr11	5594200	5594290	LTR	ORR1A1	MaLR	chr11ORR1A15594174	NonProperStrand	1	chr11	5594053	5594143	SINE	B1_Mus1	Alu	chr11B1_Mus15594044	NonProperStrand	1	1	-inf
chr3	99003132	99003154	protein_coding	Wars2	intron	ENSMUSG00000004233	NonProperStrand	48	chr2	93041333	93041388	protein_coding	Trp53i11	utr3	ENSMUSG00000068735	ProperStrand	46	1	-14.3053
chr17	46727278	46727352	protein_coding	Ptk7	exon	ENSMUSG00000023972	ProperStrand	101	chr2	121949511	121949527	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	1	-9.2537
chr6	100179350	100179378	protein_coding	Rybp	utr3	ENSMUSG00000072872	ProperStrand	51	chr4	131908835	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.4523
chr14	72301755	72301771	SINE	B4	B4	chr14B472301692	NonProperStrand	99	chr7	5027316	5030826	protein_coding	U2af2	exon	ENSMUSG00000030435	ProperStrand	103	1	-11.2218
chr17	43202524	43202541	protein_coding	Tnfrsf21	intron	ENSMUSG00000023915	ProperStrand	36	chr5	114227861	114227908	protein_coding	Iscu	exon	ENSMUSG00000025825	ProperStrand	15	1	-17.1846
chr1	108674053	108675576	protein_coding	Vps4b	exon	ENSMUSG00000009907	ProperStrand	29	chr4	131908236	131908276	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.5844
chr5	149100499	149100516	protein_coding	Mtus2	exon	ENSMUSG00000029651	ProperStrand	114	chr3	101390129	101390168	protein_coding	Atp1a1	exon	ENSMUSG00000033161	ProperStrand	316	1	-8.6982
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr6	135820109	135820125	protein_coding-noncoding	Grin2b	utr3	ENSMUSG00000030209	NonProperStrand	7	1	-17.6356
chr19	6058486	6059147	protein_coding	Fau	exon	ENSMUSG00000038274	ProperStrand	64	chr18	35716764	35716844	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.0639
chr1	165884304	165884404	protein_coding	BC055324	exon	ENSMUSG00000041406	ProperStrand	35	chr3	153573528	153573583	snoRNA	ENSMUSG00000064731_Snord45b	.	ENSMUSG00000064731	ProperStrand	205	10	-inf
chr4	116826720	116826766	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	chr1	162968216	162968289	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-1.0177
chr16	90244586	90245693	protein_coding	Scaf4	exon	ENSMUSG00000022983	ProperStrand	44	chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	2	-14.8729
chr2	9985901	9985917	protein_coding	Atp5c1	exon	ENSMUSG00000025781	ProperStrand	138	chr9	36551675	36551706	protein_coding	Stt3a	exon	ENSMUSG00000032116	ProperStrand	31	1	-12.9746
chr4	116826562	116826973	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	chr1	162965532	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-0.9531
chr4	155366536	155366553	protein_coding	B3galt6	exon	ENSMUSG00000050796	ProperStrand	40	chr7	116664809	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.2687
chr16	90934767	90934784	protein_coding	1110004E09Rik	intron	ENSMUSG00000022972	ProperStrand	8	chr3	90074754	90074837	protein_coding	Dennd4b	exon	ENSMUSG00000042404	ProperStrand	13	1	-19.2024
chr1	182513897	182530958	protein_coding	Parp1	exon	ENSMUSG00000026496	ProperStrand	227	chr3	123210854	123210920	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	7	-5.9372
chr2	90235294	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	62686775	62686791	protein_coding	Pard3b	utr3	ENSMUSG00000046526	ProperStrand	31	1	-5.7479
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr5	103854542	103854558	protein_coding	Ptpn13	utr5	ENSMUSG00000034573	NonProperStrand	74	1	-5.4927
chr2	90235315	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	79854977	79854994	protein_coding	Serpine2	intron	ENSMUSG00000026249	NonProperStrand	4	1	-10.0500
chr5	150025337	150025379	protein_coding	Uspl1	exon	ENSMUSG00000041264	ProperStrand	20	chr16	38158177	38158226	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	3	-inf
chr10	75322178	75322261	protein_coding	Mif	utr3	ENSMUSG00000033307	ProperStrand	146	chr18	35732408	35732439	protein_coding	Matr3	exon	ENSMUSG00000037236	ProperStrand	90	1	-10.7138
chr9	107848188	107848477	protein_coding	Camkv	exon	ENSMUSG00000032936	ProperStrand	14	chr16	23110963	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.2008
chr4	134311013	134311031	protein_coding	Ldlrap1	intron	ENSMUSG00000037295	ProperStrand	18	chr16	23110455	23110517	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.6884
chr13	13565076	13578948	protein_coding	Nid1	exon	ENSMUSG00000005397	ProperStrand	112	chr7	116663634	116663724	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-4.4126
chr2	180401488	180401540	protein_coding	Dido1	intron	ENSMUSG00000038914	ProperStrand	81	chr7	3297202	3297231	protein_coding	Myadm	exon	ENSMUSG00000068566	ProperStrand	31	1	-14.0403
chr4	124571450	124571466	antisense	1700125G02Rik	.	ENSMUSG00000085263	ProperStrand	1	chr8	74904830	74904925	protein_coding	Eps15l1	exon	ENSMUSG00000006276	ProperStrand	42	1	-inf
chr15	97521628	97521683	protein_coding	Rpap3	exon	ENSMUSG00000022466	ProperStrand	13	chr7	116663713	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-12.8682
chr8	112576416	112576432	LINE	L1_Mus3	L1	chr8L1_Mus3112576213	ProperStrand	24	chr1	174210708	174210725	protein_coding	Igsf8	intron	ENSMUSG00000038034	ProperStrand	25	1	-16.8481
chr11	60014411	60014447	protein_coding-noncoding	Srebf1	utr3	ENSMUSG00000020538	ProperStrand	2	chr11	60014290	60014343	protein_coding	Srebf1	exon	ENSMUSG00000020538	ProperStrand	24	1	-inf
chr8	106942360	106942376	protein_coding	Dync1li2	utr3	ENSMUSG00000035770	ProperStrand	75	chr3	153575134	153575168	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	1	-8.0490
chr7	3656364	3657403	protein_coding	Rps9	exon	ENSMUSG00000006333	ProperStrand	87	chrX	99380402	99380433	protein_coding	Rps4x	exon	ENSMUSG00000031320	ProperStrand	139	2	-16.9332
chr4	43505701	43505781	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr2	84274518	84284196	protein_coding	Tfpi	exon	ENSMUSG00000027082	ProperStrand	9	1	-6.7740
chr3	86590950	86590974	protein_coding	Dclk2	utr3	ENSMUSG00000028078	ProperStrand	50	chr16	29588797	29588817	protein_coding	Opa1	intron	ENSMUSG00000038084	NonProperStrand	5	1	-18.8567
chr19	23136380	23136416	lincRNA	C330002G04Rik	exon	ENSMUSG00000087169	NonProperStrand	1	chr6	119057630	119057647	protein_coding	Cacna1c	intron	ENSMUSG00000051331	ProperStrand	46	1	-inf
chr15	76736584	76736692	protein_coding	Rpl8	exon	ENSMUSG00000003970	ProperStrand	191	chr9	15069885	15069901	protein_coding	Med17	exon	ENSMUSG00000031935	ProperStrand	135	3	-18.9909
chr4	132848949	132849029	protein_coding	Wdtc1	utr3	ENSMUSG00000037622	ProperStrand	81	chr5	135932919	135932935	protein_coding	Hip1	exon	ENSMUSG00000039959	ProperStrand	30	1	-14.1172
chr7	119167130	119167156	protein_coding	Usp47	utr5	ENSMUSG00000059263	ProperStrand	40	chr7	116664841	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-5.6168
chr1	46132859	46132971	protein_coding	Dnahc7b	intron	ENSMUSG00000041144	NonProperStrand	57	chr16	23110913	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-1.5795
chr8	125897940	125905375	protein_coding	Tcf25	exon	ENSMUSG00000001472	ProperStrand	66	chr4	131908235	131908286	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.2842
chr7	52696813	52696913	protein_coding	Gys1	intron	ENSMUSG00000003865	ProperStrand	28	chr9	15118333	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-4.9141
chr2	26493366	26493447	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr5	23358027	23358078	snoRNA	ENSMUSG00000093321_Snord93	.	ENSMUSG00000093321	ProperStrand	218	1	-1.5467
chr18	73693166	73693187	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr1	9932550	9932627	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	3	-2.6930
chr5	74489542	74489604	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr2	164732935	164732951	protein_coding	Zfp335	exon	ENSMUSG00000039834	ProperStrand	42	1	-6.3249
chr4	131865394	131865484	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	chr7	16524110	16524198	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	1	-1.0453
chr10	11395809	11395889	LINE	L1_Mur3	L1	chr10L1_Mur311395674	ProperStrand	1	chr10	11396044	11396134	LINE	Lx2	L1	chr10Lx211396042	NonProperStrand	1	1	-inf
chr1	42936992	42937010	protein_coding	Mrps9	intron	ENSMUSG00000060679	ProperStrand	26	chr18	35716798	35716831	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.6526
chr11	58439391	58439407	protein_coding	Olfr323	exon	ENSMUSG00000043880	ProperStrand	7	chr1	71341490	71341508	protein_coding	Abca12	exon	ENSMUSG00000050296	NonProperStrand	143	1	-15.9656
chr1	74902715	74902731	protein_coding	Cdk5r2	exon	ENSMUSG00000090071	NonProperStrand	49	chr12	110874223	110874290	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	1	-10.3855
chr5	138543984	138544044	protein_coding	Zkscan1	utr3	ENSMUSG00000029729	ProperStrand	5	chr7	116664794	116664884	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-7.4478
chr6	120432385	120432401	protein_coding	Il17ra	exon	ENSMUSG00000002897	ProperStrand	61	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.2462
chr11	114275603	114275620	lincRNA	4932435O22Rik	exon	ENSMUSG00000062391	ProperStrand	2	chr7	29136578	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-9.5181
chr2	51945789	51947811	protein_coding	Rif1	exon	ENSMUSG00000036202	ProperStrand	201	chr7	134671401	134671481	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-5.4859
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr16	85900083	85900100	protein_coding	Adamts5	exon	ENSMUSG00000022894	ProperStrand	1	1	-inf
chr11	69698310	69698390	protein_coding-noncoding	Acap1	utr3	ENSMUSG00000001588	ProperStrand	6	chr11	69698142	69698347	protein_coding	Acap1	exon	ENSMUSG00000001588	ProperStrand	1	1	-inf
chr7	140506804	140506894	LINE	Lx8	L1	chr7Lx8140506824	ProperStrand	1	chr7	140506696	140506786	LTR	RMER4B	ERVK	chr7RMER4B140506364	ProperStrand	1	1	-inf
chr4	155114013	155114029	protein_coding	Gm5151	exon	ENSMUSG00000084845	ProperStrand	16	chr7	116664870	116664906	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-5.0191
chr11	3649570	3649587	protein_coding	Osbp2	intron	ENSMUSG00000020435	ProperStrand	60	chr16	87416053	87416138	protein_coding	Ltn1	exon	ENSMUSG00000052299	ProperStrand	49	2	-inf
chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr1	82679326	82679342	protein_coding	Col4a3	exon	ENSMUSG00000079465	ProperStrand	99	1	-5.4708
chr7	3293009	3293089	protein_coding	Myadm	intron	ENSMUSG00000068566	ProperStrand	31	chr11	97642955	97643045	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.6570
chr11	79871360	79871376	protein_coding	Crlf3	exon	ENSMUSG00000017561	ProperStrand	47	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-9.4174
chr3	88153343	88153947	protein_coding	Smg5	exon	ENSMUSG00000001415	ProperStrand	70	chr19	8799581	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	3	-14.7513
chr1	74470436	74470453	protein_coding	Vil1	exon	ENSMUSG00000026175	ProperStrand	68	chr8	73419709	73419776	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.9066
chr4	108297069	108297099	protein_coding	Cc2d1b	exon	ENSMUSG00000028582	ProperStrand	13	chr4	131865853	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.5141
chr2	71276843	71279279	protein_coding	Hat1	exon	ENSMUSG00000027018	ProperStrand	53	chr13	59803286	59803302	protein_coding	Fam75d3	exon	ENSMUSG00000050876	ProperStrand	46	1	-14.0997
chr12	4471013	4471032	protein_coding	Ncoa1	intron	ENSMUSG00000020647	NonProperStrand	10	chr13	51743579	51743624	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-10.5062
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr5	74489598	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	2	-2.5471
chr2	4829164	4829180	protein_coding	Sephs1	utr3	ENSMUSG00000026662	NonProperStrand	271	chr5	130300419	130300477	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-1.0230
chr8	59984869	59984935	lincRNA	2500002B13Rik	intron	ENSMUSG00000086276	ProperStrand	46	chr11	95838867	95838957	protein_coding	Igf2bp1	intron	ENSMUSG00000013415	ProperStrand	140	1	-12.1478
chr9	50405248	50405328	protein_coding	Sdhd	exon	ENSMUSG00000000171	ProperStrand	9	chrX	20256769	20256859	protein_coding	Uba1	exon	ENSMUSG00000001924	ProperStrand	156	1	-15.2903
chr9	78023110	78023152	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr6	70805477	70805577	snoRNA	ENSMUSG00000065750_SNORA5	.	ENSMUSG00000065750	ProperStrand	165	1	-3.9331
chr16	45620182	45620198	protein_coding	Gcet2	exon	ENSMUSG00000022659	NonProperStrand	39	chr18	52854064	52854080	protein_coding	Gykl1	exon	ENSMUSG00000053624	ProperStrand	18	1	-16.5703
chr2	32537222	32537312	protein_coding	Eng	utr3	ENSMUSG00000026814	ProperStrand	29	chr9	15118558	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	3	-inf
chr2	173586140	173586160	protein_coding	Vapb	intron	ENSMUSG00000054455	ProperStrand	29	chr5	121655016	121655126	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.1397
chr11	3426352	3426368	protein_coding	Smtn	exon	ENSMUSG00000020439	ProperStrand	222	chr1	162965981	162966001	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-1.4109
chr2	11512440	11516973	protein_coding	Rbm17	exon	ENSMUSG00000037197	ProperStrand	50	chr7	148634711	148634791	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-4.3314
chr2	13125136	13125234	protein_coding	Rsu1	intron	ENSMUSG00000026727	ProperStrand	13	chr15	5068407	5068425	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	2	-14.6136
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	ProperStrand	10	chr17	47985776	47985834	rRNA	n-R5s28	.	ENSMUSG00000064748	NonProperStrand	1	1	-inf
chr4	133308443	133308544	protein_coding	Arid1a	utr5	ENSMUSG00000007880	ProperStrand	465	chr17	95147163	95147202	protein_coding	Mettl4	exon	ENSMUSG00000055660	ProperStrand	7	5	-19.9296
chr11	58682398	58682415	protein_coding	2810021J22Rik	utr5	ENSMUSG00000020491	ProperStrand	162	chr11	106362304	106362341	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-3.9335
chr14	25012022	25012112	protein_coding	Dlg5	exon	ENSMUSG00000021782	ProperStrand	46	chr4	131908728	131908808	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.6050
chr9	78326364	78326450	protein_coding	Eef1a1	utr3	ENSMUSG00000037742	ProperStrand	1990	chr5	117559800	117559818	protein_coding	Suds3	exon	ENSMUSG00000066900	NonProperStrand	8	1	-10.4454
chr19	8800356	8800483	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	chr15	98356776	98356913	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	12	-7.5918
chr17	56891033	56891133	protein_coding	Nrtn	exon	ENSMUSG00000039481	ProperStrand	5	chr9	15118330	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-8.4764
chr7	108971290	108971306	protein_coding	Inppl1	utr3	ENSMUSG00000032737	ProperStrand	272	chrX	91435822	91435858	protein_coding	Eif2s3x	utr3	ENSMUSG00000035150	ProperStrand	55	1	-10.4585
chrX	137010332	137010361	protein_coding	Prps1	utr3	ENSMUSG00000031432	ProperStrand	17	chr7	116664809	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	6	-inf
chr4	116875170	116875249	snRNA	ENSMUSG00000070228_U5	.	ENSMUSG00000070228	ProperStrand	131	chr1	162967530	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-3.7892
chr4	131908397	131908440	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	chr9	40611665	40611752	snoRNA	ENSMUSG00000075876_Snord14c	.	ENSMUSG00000075876	ProperStrand	104	1	-0.7213
chr2	118467207	118467232	protein_coding	Bub1b	utr3	ENSMUSG00000040084	ProperStrand	45	chr10	39978282	39978372	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-6.0246
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr11	35395695	35395713	protein_coding	Slit3	intron	ENSMUSG00000056427	NonProperStrand	45	1	-13.7313
chr5	54389948	54389965	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	chr9	120038503	120038621	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-2.0632
chrX	130496426	130496668	protein_coding	Sytl4	exon	ENSMUSG00000031255	ProperStrand	169	chr5	63027288	63027307	protein_coding	Arap2	exon	ENSMUSG00000037999	NonProperStrand	3	1	-17.9218
chr12	110884450	110884550	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr14	31827478	31827545	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	8	-19.4461
chr17	91492015	91492031	protein_coding	Nrxn1	utr5	ENSMUSG00000024109	NonProperStrand	22	chr4	131865856	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.5019
chr11	31258350	31258369	protein_coding	Stc2	utr3	ENSMUSG00000020303	ProperStrand	18	chrX	84483704	84483731	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-10.6865
chrX	6567660	6572650	protein_coding	Ccnb3	exon	ENSMUSG00000051592	NonProperStrand	3	chr9	15118245	15118319	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-9.6743
chr11	60598678	60598797	protein_coding	Smcr8	utr3	ENSMUSG00000049323	ProperStrand	46	chr1	162967533	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-3.9691
chr2	22444182	22444972	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	chr17	13112450	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	4	-2.3203
chr19	6058461	6059147	protein_coding	Fau	exon	ENSMUSG00000038274	ProperStrand	64	chr4	131908254	131908354	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-5.7003
chr10	122003528	122003581	LINE	L1Md_F2	L1	chr10L1Md_F2122002095	NonProperStrand	23	chr10	46308613	46308639	LINE	Lx8	L1	chr10Lx846308189	NonProperStrand	1	1	-inf
chr4	134979551	134979569	protein_coding	Rcan3	intron	ENSMUSG00000059713	NonProperStrand	2	chr4	131865855	131865915	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-8.7800
chr7	148049734	148049774	protein_coding	Sirt3	utr3	ENSMUSG00000025486	ProperStrand	33	chr9	120038569	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-6.9698
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr1	102076760	102076790	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	1	-3.3083
chr15	103129171	103129244	protein_coding	Copz1	utr3	ENSMUSG00000060992	NonProperStrand	2	chr8	129468748	129468800	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	NonProperStrand	22	1	-inf
chr7	78405754	78405834	SINE	B4A	B4	chr7B4A78405644	NonProperStrand	1	chr7	78406170	78406260	SINE	B4A	B4	chr7B4A78406167	NonProperStrand	1	1	-inf
chr3	96363042	96363952	protein_coding	Txnip	exon	ENSMUSG00000038393	ProperStrand	172	chr16	23111375	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	13	-12.8585
chr6	71781393	71781473	protein_coding	Immt	utr5	ENSMUSG00000052337	ProperStrand	48	chr1	134888714	134891081	protein_coding	Mdm4	utr3	ENSMUSG00000054387	ProperStrand	95	1	-12.8404
chr14	43424071	43424161	LTR	RMER13A	ERVK	chr14RMER13A43423609	NonProperStrand	1	chr14	52185749	52185829	protein_coding	Gm5622	intron	ENSMUSG00000079244	ProperStrand	1	1	-inf
chr2	105012751	105012769	protein_coding	Wt1	utr3	ENSMUSG00000016458	NonProperStrand	338	chr1	162968214	162968277	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-3.4914
chr4	125386576	125386666	protein_coding	Grik3	utr3	ENSMUSG00000001985	ProperStrand	126	chr5	74489583	74489673	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-2.4507
chr5	122910073	122910173	protein_coding	Atp2a2	exon	ENSMUSG00000029467	ProperStrand	166	chr19	8798743	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-2.9108
chr11	69266813	69266830	protein_coding	Dnahc2	exon	ENSMUSG00000005237	ProperStrand	95	chr3	153574577	153574629	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	1	-8.7537
chr10	77451652	77452353	protein_coding	Pfkl	exon	ENSMUSG00000020277	ProperStrand	179	chr1	162965999	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-1.7295
chr5	80694166	80694186	LINE	Lx5	L1	chr5Lx580693451	ProperStrand	2	chr3	68889086	68889186	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-10.5388
chr19	7110012	7110088	protein_coding	Stip1	exon	ENSMUSG00000024966	ProperStrand	100	chr18	73693167	73693186	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-4.5365
chr1	120948303	120948390	protein_coding	Gli2	intron	ENSMUSG00000048402	ProperStrand	148	chr10	127521203	127521269	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	1	-6.9954
chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr12	88488443	88496424	protein_coding	Pomt2	exon	ENSMUSG00000034126	NonProperStrand	331	1	-3.1956
chr19	24169830	24169920	protein_coding	Tjp2	utr3	ENSMUSG00000024812	ProperStrand	63	chr18	35716776	35716856	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.0896
chr1	120578978	120579044	protein_coding	Tfcp2l1	utr3	ENSMUSG00000026380	ProperStrand	158	chr12	106269292	106269382	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-2.3957
chr9	47608249	47608266	protein_coding	Cadm1	intron	ENSMUSG00000032076	ProperStrand	77	chr10	75322906	75322961	protein_coding	Mif	utr5	ENSMUSG00000033307	ProperStrand	146	1	-11.0269
chr7	63234732	63234748	protein_coding	Nipa1	utr3	ENSMUSG00000047037	ProperStrand	16	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-9.8750
chr2	146125209	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	chr7	29136617	29136651	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-1.5588
chr18	49992730	49992777	protein_coding	Dmxl1	utr5	ENSMUSG00000037416	NonProperStrand	2	chr13	23714267	23714386	protein_coding	Hist1h1e	utr5	ENSMUSG00000051627	NonProperStrand	3	2	-inf
chr10	98649612	98649629	protein_coding	Poc1b	intron	ENSMUSG00000019952	NonProperStrand	7	chr16	23110558	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-6.6152
chr5	93371786	93371808	protein_coding	Shroom3	exon	ENSMUSG00000029381	ProperStrand	52	chr9	59521994	59522065	protein_coding	Pkm2	intron	ENSMUSG00000032294	ProperStrand	1296	3	-16.7401
chr3	96362853	96362879	protein_coding	Txnip	exon	ENSMUSG00000038393	ProperStrand	172	chr13	21974743	21974788	tRNA	tRNA988-PheGAA	.	2326	ProperStrand	3	1	-17.7048
chr15	79253934	79254007	protein_coding	Csnk1e	utr3	ENSMUSG00000022433	ProperStrand	59	chr3	14603674	14603707	protein_coding	E2f5	exon	ENSMUSG00000027552	ProperStrand	10	2	-19.8311
chr11	75578840	75578891	protein_coding	Ywhae	utr3	ENSMUSG00000020849	ProperStrand	176	chr14	33005038	33005084	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-2.0879
mmu-miR-6240	1	23	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr8	77742558	77742574	protein_coding	Rasd2	exon	ENSMUSG00000034472	NonProperStrand	237	2	-5.6224
chr2	114470516	114470554	protein_coding	Atpbd4	exon	ENSMUSG00000057147	ProperStrand	9	chr1	161270433	161270523	snoRNA	ENSMUSG00000089536_Scarna3a	.	ENSMUSG00000089536	ProperStrand	247	1	-14.3627
chr18	35776137	35776224	protein_coding	Paip2	utr3	ENSMUSG00000037058	ProperStrand	15	chr7	117166761	117166851	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-7.5742
chr15	99838150	99840811	protein_coding	Larp4	exon	ENSMUSG00000023025	ProperStrand	41	chr1	162965561	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.9824
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr1	72758354	72758754	protein_coding	Rpl37a	exon	ENSMUSG00000046330	ProperStrand	94	2	-15.0417
chr3	34549712	34549802	protein_coding	Sox2	exon	ENSMUSG00000074637	ProperStrand	299	chr12	60141349	60141429	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-3.7285
chrX	71589885	71589906	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr7	116664813	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	5	-3.6399
chr17	33953179	33954201	protein_coding	Kank3	exon	ENSMUSG00000042099	ProperStrand	64	chr11	69481374	69481464	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.0842
chr17	24300045	24300061	protein_coding	Amdhd2	exon	ENSMUSG00000036820	ProperStrand	11	chr11	6428100	6428169	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-6.4917
chr9	78023189	78023283	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr8	90668518	90671492	protein_coding	Heatr3	exon	ENSMUSG00000031657	ProperStrand	24	1	-7.7053
chr11	98854409	98885409	protein_coding	Top2a	utr5	ENSMUSG00000020914	ProperStrand	324	chr16	23111372	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	6	-1.0696
chr7	111381199	111381285	protein_coding	Trim6	exon	ENSMUSG00000072244	ProperStrand	40	chr4	131908777	131908868	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.8200
chr3	94894550	94894630	snoRNA	ENSMUSG00000064952_SNORD62	.	ENSMUSG00000064952	ProperStrand	75	chr15	34370563	34370653	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-3.1423
chr2	179322378	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr8	73419657	73419743	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-1.4118
chr6	136769062	136769079	protein_coding	Wbp11	exon	ENSMUSG00000030216	ProperStrand	87	chr11	62416597	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-4.4511
chr13	55424373	55425713	protein_coding	Prelid1	exon	ENSMUSG00000021486	ProperStrand	19	chr2	26493382	26493482	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-5.9729
chr12	102297023	102297040	protein_coding	Smek1	exon	ENSMUSG00000041846	ProperStrand	66	chr3	135128676	135128724	protein_coding	Ube2d3	utr3	ENSMUSG00000078578	ProperStrand	34	1	-14.2622
chr7	20443580	20443642	protein_coding	Gm19345	utr3	ENSMUSG00000092216	ProperStrand	2	chr1	145626071	145626161	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-16.3206
chr1	102076756	102076794	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	chr14	33005110	33005210	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-0.8669
chr12	88614576	88614676	protein_coding	Ahsa1	exon	ENSMUSG00000021037	ProperStrand	58	chr4	131908688	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-2.4418
chr2	90235290	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	75314331	75314411	protein_coding	Prpf8	utr3	ENSMUSG00000020850	ProperStrand	255	3	-5.2472
chr6	35459440	35459463	protein_coding	Mtpn	utr3	ENSMUSG00000029840	ProperStrand	18	chr5	130300470	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-7.9176
chr8	26629479	26629524	protein_coding	Fgfr1	utr5	ENSMUSG00000091895	ProperStrand	16	chr16	23111771	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.2713
chr16	90020112	90020212	protein_coding	Tiam1	intron	ENSMUSG00000002489	ProperStrand	80	chr10	110918574	110918639	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	4	-10.1697
chr5	76578959	76582566	protein_coding	Srd5a3	exon	ENSMUSG00000029233	ProperStrand	11	chr11	68886928	68887018	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	7	-20.2067
chr17	29171620	29171719	protein_coding	Srsf3	intron	ENSMUSG00000071172	ProperStrand	23	chr10	23505152	23505238	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-7.2788
chr15	57264749	57264796	protein_coding	Slc22a22	intron	ENSMUSG00000022366	ProperStrand	4	chr19	8963087	8963187	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-7.6308
chr14	66166798	66166898	protein_coding	Elp3	exon	ENSMUSG00000022031	ProperStrand	71	chr1	63225285	63225322	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	1	-8.4989
chr2	25915656	25915672	protein_coding	Nacc2	exon	ENSMUSG00000026932	ProperStrand	98	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-10.6995
chr8	97387389	97387489	protein_coding	Polr2c	exon	ENSMUSG00000031783	ProperStrand	16	chr16	23111451	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.4608
chr15	99843699	99843728	protein_coding	Larp4	utr3	ENSMUSG00000023025	ProperStrand	41	chr11	69483136	69483278	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-7.9530
chr10	3969317	3969397	LINE	L1Md_F2	L1	chr10L1Md_F23968512	NonProperStrand	1	chr12	41137271	41137361	protein_coding	Zfp277	exon	ENSMUSG00000055917	NonProperStrand	1	1	-inf
chr10	127525570	127526069	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr8	46334012	46334105	protein_coding	F11	exon	ENSMUSG00000031645	ProperStrand	21	2	-16.8857
chr1	176764802	176764818	protein_coding	Grem2	utr3	ENSMUSG00000050069	ProperStrand	24	chr11	106362640	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-9.2486
chr7	52382010	52382055	protein_coding-noncoding	Rpl13a	utr3	ENSMUSG00000074129	ProperStrand	106	chr11	69483136	69483278	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	5	-8.2952
chr5	152198645	152198661	lincRNA	1700028E10Rik	exon	ENSMUSG00000087548	ProperStrand	53	chr18	35732196	35732213	protein_coding	Matr3	exon	ENSMUSG00000037236	ProperStrand	90	1	-12.7498
chr6	67244501	67244528	protein_coding	Il12rb2	intron	ENSMUSG00000018341	NonProperStrand	11	chr5	112766081	112766202	protein_coding	Tfip11	exon	ENSMUSG00000029345	ProperStrand	111	6	-inf
chr9	15120932	15120964	snoRNA	ENSMUSG00000065265_SNORA32	.	ENSMUSG00000065265	ProperStrand	101	chr7	51505224	51505267	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	1	-7.1141
chr5	122022099	122022127	protein_coding	Aldh2	exon	ENSMUSG00000029455	ProperStrand	108	chr11	102294587	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	1	-7.7194
chr6	120377867	120378302	protein_coding	Kdm5a	exon	ENSMUSG00000030180	ProperStrand	57	chr11	97642990	97643070	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.5597
chr10	90075788	90075806	protein_coding	Anks1b	intron	ENSMUSG00000058589	NonProperStrand	230	chr2	166888977	166889056	snoRNA	ENSMUSG00000077515_SNORD12	.	ENSMUSG00000077515	ProperStrand	191	1	-8.3017
chr12	114401297	114401318	protein_coding	4930427A07Rik	exon	ENSMUSG00000037466	ProperStrand	8	chr5	130300416	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-15.1469
chr2	90235299	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr13	22011134	22011168	tRNA	tRNA86-SerAGA	.	1432005	ProperStrand	33	1	-5.6244
chr7	88309286	88309447	protein_coding	Slc28a1	exon	ENSMUSG00000025726	ProperStrand	8	chr19	8799607	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-10.8847
chr8	112387973	112387989	antisense	Gm17344	.	ENSMUSG00000078143	NonProperStrand	100	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-6.1921
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr18	35714143	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	9	-0.8593
chr7	135842910	135845761	protein_coding	Mcmbp	exon	ENSMUSG00000048170	ProperStrand	87	chr7	52382014	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-5.9786
chr1	134887024	134893234	protein_coding	Mdm4	utr3	ENSMUSG00000054387	ProperStrand	95	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-1.0457
chr4	131864823	131864868	lincRNA	Snhg12	intron	ENSMUSG00000086290	ProperStrand	178	chr8	124858872	124859057	protein_coding	Zfpm1	exon	ENSMUSG00000049577	ProperStrand	24	13	-19.4354
chr6	52141364	52141380	protein_coding	Hoxa4	exon	ENSMUSG00000000942	ProperStrand	2	chr16	23110955	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr7	52647479	52650036	protein_coding	Snrnp70	exon	ENSMUSG00000063511	ProperStrand	61	chr9	15119702	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.6010
chr16	49069583	49069599	protein_coding	Myh15	exon	ENSMUSG00000092009	ProperStrand	9	chr11	106362303	106362326	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-9.6932
chr2	158185528	158185628	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr13	21332851	21332887	tRNA	tRNA68-AlaTGC	.	1392851	ProperStrand	8	1	-10.5996
chr7	19666288	19666378	protein_coding	Dmwd	exon	ENSMUSG00000030410	ProperStrand	41	chr6	71832603	71832683	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-6.3618
chrX	138147584	138157451	protein_coding	Irs4	utr3	ENSMUSG00000054667	ProperStrand	24	chr16	23111377	23111505	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-9.8344
chr12	75043189	75043219	protein_coding	Hif1a	exon	ENSMUSG00000021109	ProperStrand	20	chr9	15119722	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.6697
chr2	90235313	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	68676029	68676046	protein_coding	Rhobtb1	utr5	ENSMUSG00000019944	NonProperStrand	6	1	-9.1372
chr1	191472353	191472435	protein_coding	Cenpf	intron	ENSMUSG00000026605	ProperStrand	44	chr2	26493391	26493481	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-7.2348
chr1	63225275	63225322	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	chr5	108336424	108336495	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	4	-4.8277
chr8	125627196	125627239	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	chr6	125235854	125235871	protein_coding	Tuba3a	intron	ENSMUSG00000067702	NonProperStrand	8	1	-14.7452
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr1	39605591	39605696	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	8	-inf
chr16	30569272	30569303	protein_coding	Lsg1	exon	ENSMUSG00000022538	ProperStrand	25	chr7	29136615	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-6.6779
chr11	14961829	14961849	LINE	Lx	L1	chr11Lx14961726	ProperStrand	93	chr10	75398708	75398993	protein_coding	Chchd10	exon	ENSMUSG00000049422	ProperStrand	140	1	-10.7316
chr16	23110824	23110851	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr4	116826700	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-2.7121
chr5	66015200	66015217	protein_coding	Pds5a	exon	ENSMUSG00000029202	ProperStrand	62	chr15	82980108	82980189	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-7.0741
chr2	25312429	25313191	protein_coding	Clic3	exon	ENSMUSG00000015093	ProperStrand	79	chr3	108357401	108357418	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-4.0180
chr17	56238670	56238686	protein_coding	Hdgfrp2	exon	ENSMUSG00000002833	ProperStrand	36	chr12	106269285	106269385	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-5.1229
chr19	46107557	46107606	protein_coding	Ldb1	utr3	ENSMUSG00000025223	ProperStrand	42	chr6	82041939	82041956	protein_coding	Fam176a	exon	ENSMUSG00000035104	ProperStrand	64	1	-13.9027
chr5	89667342	89667358	protein_coding	Slc4a4	utr3	ENSMUSG00000060961	NonProperStrand	195	chr7	116664811	116664868	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-0.8145
chr3	33968776	33968878	protein_coding	Dnajc19	intron	ENSMUSG00000027679	NonProperStrand	4	chr7	150717298	150717348	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-11.1357
chr3	88354716	88354806	protein_coding-noncoding	Lamtor2	utr3	ENSMUSG00000028062	ProperStrand	1	chr3	88354497	88354587	protein_coding	Lamtor2	intron	ENSMUSG00000028062	ProperStrand	1	1	-inf
chr1	36655860	36655879	protein_coding	Fam178b	intron	ENSMUSG00000046337	ProperStrand	5	chr2	119437565	119437581	protein_coding	Oip5	exon	ENSMUSG00000072980	ProperStrand	3	1	-inf
mmu-miR-6240	2	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr16	42282955	42282971	protein_coding	Gap43	intron	ENSMUSG00000047261	NonProperStrand	25	1	-7.6490
chr1	63225578	63225678	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	NonProperStrand	3	chr8	32260372	32260425	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	NonProperStrand	14	1	-inf
chr17	29230601	29230620	protein_coding	Cdkn1a	intron	ENSMUSG00000023067	NonProperStrand	11	chr10	88412381	88412399	protein_coding	Ano4	utr3	ENSMUSG00000035189	ProperStrand	21	1	-18.6067
chr17	51059907	51059923	protein_coding	Tbc1d5	exon	ENSMUSG00000023923	NonProperStrand	51	chr11	97642947	97643042	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.7531
chr6	67217208	67217236	protein_coding	Serbp1	exon	ENSMUSG00000036371	ProperStrand	261	chr19	47348389	47348406	protein_coding	Sh3pxd2a	intron	ENSMUSG00000053617	ProperStrand	57	1	-10.4691
chr4	18702517	18702534	processed_transcript	Gm11867	.	ENSMUSG00000087402	ProperStrand	3	chr9	15119713	15119737	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-8.7352
chr9	15130706	15130805	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	chr11	77996558	77996613	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-2.2859
chr1	138052750	138052844	protein_coding	Kif21b	exon	ENSMUSG00000041642	ProperStrand	77	chr7	29136525	29136583	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.9549
chr17	46444240	46446994	protein_coding	Abcc10	exon	ENSMUSG00000032842	NonProperStrand	5	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-6.5022
chr2	6366109	6366172	protein_coding	Usp6nl	utr3	ENSMUSG00000039046	ProperStrand	59	chr11	6428035	6428100	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-5.5342
chr1	71659047	71659090	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr5	148113281	148113297	protein_coding	Cdx2	utr3	ENSMUSG00000029646	ProperStrand	276	1	-4.8361
chr6	124691242	124691298	protein_coding	Grcc10	utr5	ENSMUSG00000072772	ProperStrand	88	chr4	131866241	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-5.1339
chr19	8787257	8787306	protein_coding	Slc3a2	exon	ENSMUSG00000010095	ProperStrand	63	chr4	132394296	132394350	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	1	-9.0399
chr8	42781803	42781893	LINE	Lx7	L1	chr8Lx742780868	NonProperStrand	1	chr8	42781979	42782069	LINE	Lx7	L1	chr8Lx742781976	NonProperStrand	1	1	-inf
chr14	21510036	21510072	protein_coding	Sec24c	exon	ENSMUSG00000039367	ProperStrand	60	chr17	35088957	35088996	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	3	-13.5549
chr2	105660946	105661046	protein_coding	Elp4	intron	ENSMUSG00000027167	ProperStrand	11	chr16	23110965	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	8	-20.4758
chr17	6232006	6232022	protein_coding	Tulp4	exon	ENSMUSG00000034377	NonProperStrand	265	chr2	26494708	26494808	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-0.8283
chr14	3930344	3930434	protein_coding	Gm3002	intron	ENSMUSG00000079399	ProperStrand	26	chr4	131866176	131866256	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-5.2680
chr7	13516146	13516173	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr9	65044377	65044494	snRNA	ENSMUSG00000075763_U5	.	ENSMUSG00000075763	ProperStrand	216	1	-6.1248
chr17	36000485	36000501	protein_coding	Nrm	exon	ENSMUSG00000059791	ProperStrand	253	chr2	26494708	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-1.7729
chr3	7560302	7560342	LINE	L1Md_F2	L1	chr3L1Md_F27556828	NonProperStrand	3	chr2	179992130	179992335	protein_coding	Rps21	utr5	ENSMUSG00000039001	ProperStrand	46	3	-inf
chr19	60850278	60850365	snoRNA	ENSMUSG00000065167_Snora19	.	ENSMUSG00000065167	ProperStrand	10	chr11	69483190	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-5.8555
chrX	71533839	71534003	protein_coding	Taz	exon	ENSMUSG00000009995	ProperStrand	59	chr4	131908356	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-2.7259
chr11	88813840	88816614	protein_coding	Scpep1	exon	ENSMUSG00000000278	ProperStrand	54	chr18	35716830	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.3452
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr7	19886599	19886629	tRNA	tRNA86-SeCTCA	.	898793	ProperStrand	34	1	-7.5008
chr11	120098077	120098093	protein_coding	Bahcc1	utr5	ENSMUSG00000039741	ProperStrand	118	chr16	90386834	90386853	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	1	-10.8504
chr15	96402139	96402198	protein_coding	Slc38a1	utr3	ENSMUSG00000023169	ProperStrand	69	chr11	60370927	60370943	protein_coding	Alkbh5	utr3	ENSMUSG00000042650	ProperStrand	203	1	-10.5875
chr1	63225075	63225422	protein_coding	Eef1b2	exon	ENSMUSG00000025967	ProperStrand	106	chr10	6063958	6063975	protein_coding	Akap12	intron	ENSMUSG00000038587	ProperStrand	1008	1	-6.5459
chr17	46623728	46623808	protein_coding	Ttbk1	intron	ENSMUSG00000015599	ProperStrand	5	chr2	106063472	106063562	pseudogene	Gm13993	.	ENSMUSG00000083506	ProperStrand	1	1	-inf
chr5	130330707	130334139	protein_coding	Sumf2	exon	ENSMUSG00000025538	ProperStrand	20	chr14	16271120	16271137	protein_coding	Lrrc3b	utr5	ENSMUSG00000045201	ProperStrand	10	1	-18.7257
chr6	29588891	29588981	LINE	Lx	L1	chr6Lx29588903	ProperStrand	1	chr6	29589231	29589321	LTR	RMER17B	ERVK	chr6RMER17B29589098	ProperStrand	1	1	-inf
chr8	74843979	74844013	protein_coding	Klf2	exon	ENSMUSG00000055148	ProperStrand	82	chr9	120037932	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-4.1108
chr4	139045189	139045289	protein_coding	Ubr4	utr3	ENSMUSG00000066036	ProperStrand	304	chr1	162968213	162968289	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-3.6860
chr11	55307034	55308835	protein_coding	G3bp1	exon	ENSMUSG00000018583	ProperStrand	106	chr11	97643006	97643086	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.5596
chr11	68886928	68887057	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	chr4	130305549	130305620	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	2	-2.4279
chr5	89186201	89186298	protein_coding	Mob1b	utr3	ENSMUSG00000006262	ProperStrand	3	chr16	23111417	23111467	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-6.9982
chr9	78023109	78023148	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr13	21872103	21872164	protein_coding	Hist1h1b	exon	ENSMUSG00000058773	ProperStrand	65	2	-9.3360
chr14	55050625	55050700	protein_coding	Mmp14	utr5	ENSMUSG00000000957	ProperStrand	61	chr9	120039541	120039631	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.2886
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr7	148634776	148634835	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-1.5204
chr14	47948933	47948949	LTR	RMER17A2	ERVK	chr14RMER17A247948307	NonProperStrand	43	chr11	77995187	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-6.8433
chr11	97639435	97642651	protein_coding	Rpl23	exon	ENSMUSG00000071415	ProperStrand	920	chr16	23111372	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	17	-1.0388
chr4	131890483	131890502	protein_coding	Rcc1	exon	ENSMUSG00000028896	ProperStrand	55	chr9	15119302	15119375	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-5.2779
chr10	127152705	127152721	protein_coding	Myo1a	exon	ENSMUSG00000025401	ProperStrand	93	chr11	97643007	97643080	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.7575
chr6	51431759	51432520	protein_coding	Cbx3	exon	ENSMUSG00000029836	ProperStrand	19	chr17	33131785	33131825	protein_coding	Zfp952	intron	ENSMUSG00000053390	ProperStrand	1	1	-inf
chr17	24857317	24857397	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr17	24856621	24856711	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-2.9581
chr11	51551333	51551424	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	chr5	130300460	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	8	-0.9542
chr19	4037345	4037595	protein_coding	Gstp1	exon	ENSMUSG00000060803	ProperStrand	9	chr1	184903818	184903834	protein_coding	Tlr5	exon	ENSMUSG00000079164	NonProperStrand	5	1	-18.8319
chr5	117733223	117737533	protein_coding	Pebp1	exon	ENSMUSG00000032959	ProperStrand	54	chr4	131908689	131908799	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-2.6086
chr17	33961611	33966613	protein_coding	Ndufa7	exon	ENSMUSG00000041881	ProperStrand	64	chr5	121655032	121655062	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-6.1551
chr2	47962755	47962773	lincRNA	Gm13481	intron	ENSMUSG00000086353	NonProperStrand	36	chr1	162965980	162966041	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-4.5692
chr1	120355713	120355766	snRNA	ENSMUSG00000080542_U4atac	.	ENSMUSG00000080542	ProperStrand	73	chr5	74489610	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-3.4156
chr16	20371920	20372029	protein_coding	Abcc5	intron	ENSMUSG00000022822	ProperStrand	30	chr15	98350146	98350186	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-6.1183
chr7	86603234	86604097	protein_coding	Polg	exon	ENSMUSG00000039176	ProperStrand	93	chr9	120037978	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-3.8746
chr9	30235085	30235102	protein_coding	Snx19	exon	ENSMUSG00000031993	ProperStrand	353	chrX	93136253	93141854	protein_coding	Las1l	exon	ENSMUSG00000057421	ProperStrand	248	1	-6.9346
chr2	156137630	156137720	protein_coding	Scand1	utr3	ENSMUSG00000046229	ProperStrand	13	chr7	118219580	118219660	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-11.6608
chr4	133240895	133240938	protein_coding	Arid1a	exon	ENSMUSG00000007880	ProperStrand	465	chr7	118219575	118219667	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-0.8472
chr2	125431946	125431980	protein_coding	Cep152	intron	ENSMUSG00000068394	ProperStrand	60	chr16	23111385	23111449	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-5.5002
chr4	43505656	43505797	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr1	167263509	167266876	protein_coding	Dcaf6	exon	ENSMUSG00000026571	NonProperStrand	3	1	-9.2362
chr5	35925730	35925747	lincRNA	4931431C16Rik	exon	ENSMUSG00000055061	ProperStrand	28	chr5	114194629	114194660	protein_coding	Sart3	exon	ENSMUSG00000018974	ProperStrand	50	1	-15.2098
chr17	27767395	27767424	protein_coding	Rps10	utr3	ENSMUSG00000052146	ProperStrand	94	chr2	130101258	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-5.7073
chr6	87138823	87154416	protein_coding	Antxr1	exon	ENSMUSG00000033420	ProperStrand	70	chr1	88252836	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-6.3352
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr2	158182180	158182291	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	2	-1.6830
chr7	89112347	89112363	protein_coding	Bnc1	utr3	ENSMUSG00000025105	NonProperStrand	11	chr16	23111394	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-7.1274
chr18	38792404	38792494	protein_coding	Arhgap26	intron	ENSMUSG00000036452	ProperStrand	46	chr4	131865854	131865936	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-3.9386
chr11	104196346	104196436	protein_coding	1700081L11Rik	exon	ENSMUSG00000018412	ProperStrand	73	chr7	116664841	116664921	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.2176
chr2	119752333	119752436	protein_coding	Mga	exon	ENSMUSG00000033943	ProperStrand	180	chr7	118219576	118219624	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-2.2053
chr8	55612900	55612954	antisense	Spcs3	.	ENSMUSG00000054408	ProperStrand	30	chr19	8798507	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-6.5788
chr19	60913729	60913745	protein_coding-noncoding	Sfxn4	utr3	ENSMUSG00000063698	NonProperStrand	2	chr16	20550597	20550687	protein_coding	Abcf3	exon	ENSMUSG00000003234	ProperStrand	6	1	-inf
chr5	135096147	135096235	protein_coding	Eif4h	utr3	ENSMUSG00000040731	ProperStrand	46	chr1	89681293	89681383	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-5.9625
chr19	8800086	8800148	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	chr2	158182163	158182281	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	3	-1.8097
chr17	32339648	32348189	protein_coding	Brd4	exon	ENSMUSG00000024002	ProperStrand	121	chr5	136333035	136333053	protein_coding	Srrm3	utr3	ENSMUSG00000039860	ProperStrand	41	2	-19.6781
chr6	29160719	29160737	protein_coding	Impdh1	intron	ENSMUSG00000003500	NonProperStrand	22	chr9	15119666	15119766	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.4840
chr10	84426052	84426069	protein_coding	Ric8b	intron	ENSMUSG00000035620	NonProperStrand	14	chr16	23110828	23110875	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.2008
chr15	76426952	76426997	protein_coding	Cpsf1	exon	ENSMUSG00000034022	ProperStrand	127	chr16	23110534	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-3.8997
chr8	91106344	91106360	protein_coding	Nkd1	intron	ENSMUSG00000031661	ProperStrand	57	chr2	26494772	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.1996
chr8	63704831	63704849	protein_coding	Sh3rf1	exon	ENSMUSG00000031642	ProperStrand	50	chr9	55057284	55061717	protein_coding	Fbxo22	exon	ENSMUSG00000032309	ProperStrand	79	1	-13.1287
chr16	32615405	32632453	protein_coding	Tfrc	exon	ENSMUSG00000022797	ProperStrand	71	chr9	15119630	15119760	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-4.1605
chr18	36913166	36913223	protein_coding	Ik	exon	ENSMUSG00000024474	ProperStrand	60	chr14	76247753	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	3	-10.1040
chr15	41359227	41359307	protein_coding	Oxr1	intron	ENSMUSG00000022307	NonProperStrand	12	chr10	36398598	36398688	protein_coding	Hs3st5	intron	ENSMUSG00000044499	NonProperStrand	6	1	-19.9654
chr3	41400633	41400723	protein_coding	Phf17	exon	ENSMUSG00000025764	ProperStrand	101	chr18	35716688	35716768	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	15	-inf
chr6	3488504	3488576	protein_coding	Ccdc132	intron	ENSMUSG00000001376	ProperStrand	13	chr11	97642992	97643082	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-5.3468
chr19	46022236	46022252	protein_coding	9130011E15Rik	intron	ENSMUSG00000039901	ProperStrand	129	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-7.3993
chr12	53643477	53643511	protein_coding	Arhgap5	exon	ENSMUSG00000035133	ProperStrand	16	chr3	157729963	157729979	protein_coding	Lrrc40	utr3	ENSMUSG00000063052	ProperStrand	147	1	-14.2053
chr15	102239951	102240026	protein_coding	Sp1	exon	ENSMUSG00000001280	ProperStrand	124	chr4	116991019	116991036	protein_coding	Rnf220	intron	ENSMUSG00000028677	ProperStrand	131	1	-10.2882
chr3	113780690	113780707	protein_coding	Col11a1	intron	ENSMUSG00000027966	ProperStrand	7	chr5	121655127	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-8.0440
chr14	17232594	17232632	protein_coding	Top2b	exon	ENSMUSG00000017485	ProperStrand	24	chr1	192712615	192712631	protein_coding	Rps6kc1	exon	ENSMUSG00000089872	ProperStrand	241	1	-12.3809
chr1	141377266	141377300	protein_coding	Aspm	exon	ENSMUSG00000033952	ProperStrand	64	chr7	116664820	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	4	-8.8682
chr3	121695818	121695835	protein_coding	Arhgap29	exon	ENSMUSG00000039831	ProperStrand	12	chr17	24665420	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	3	-18.3586
chr1	180181220	180181236	protein_coding	Pppde1	utr3	ENSMUSG00000026502	ProperStrand	27	chr1	162966189	162966256	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-9.1821
chr1	72895693	72895713	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	2	-3.2353
chr3	100846634	100846680	protein_coding	Ptgfrn	utr3	ENSMUSG00000027864	ProperStrand	67	chr3	146121719	146121741	protein_coding	Ctbs	exon	ENSMUSG00000028189	ProperStrand	6	1	-17.5918
chr4	33514443	33514543	protein_coding	Rngtt	intron	ENSMUSG00000028274	ProperStrand	26	chr12	17553016	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-6.7405
chr4	108011419	108011438	protein_coding	2010305A19Rik	utr3	ENSMUSG00000048351	ProperStrand	8	chr15	79747601	79747661	protein_coding	Cbx7	utr3	ENSMUSG00000053411	ProperStrand	62	1	-17.3083
chr7	54263597	54263687	protein_coding	Spty2d1	utr5	ENSMUSG00000049516	ProperStrand	20	chr9	64024930	64024999	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	1	-11.3670
chr13	88569464	88569482	LTR	RMER6D	ERVK	chr13RMER6D88569354	ProperStrand	42	chr16	23111396	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.7838
chr7	66170777	66170857	LINE	L1_Mus3	L1	chr7L1_Mus366170797	ProperStrand	1	chr19	33762231	33762321	pseudogene	Gm8980	.	ENSMUSG00000085924	NonProperStrand	1	1	-inf
chr3	96654255	96654271	protein_coding	Pdzk1	exon	ENSMUSG00000038298	ProperStrand	101	chr13	23654052	23654119	protein_coding	Hist1h3e	exon	ENSMUSG00000069273	ProperStrand	30	1	-13.6742
chr14	55186310	55186380	protein_coding	Jub	utr3	ENSMUSG00000022178	ProperStrand	25	chr9	30235085	30235101	protein_coding	Snx19	exon	ENSMUSG00000031993	ProperStrand	353	1	-11.5340
chr7	108347075	108347093	protein_coding	Fchsd2	exon	ENSMUSG00000030691	NonProperStrand	28	chr17	35299507	35299630	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-6.2728
chr7	35983752	35983768	protein_coding	Slc7a10	exon	ENSMUSG00000030495	NonProperStrand	33	chr16	23110827	23110867	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.9284
chr19	46080183	46080199	protein_coding	Hps6	exon	ENSMUSG00000074811	NonProperStrand	45	chr9	120039569	120039610	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.8509
mmu-miR-1949	0	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr2	26494708	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	15	-11.0445
chr5	122009145	122009161	LTR	RMER10B	ERVL	chr5RMER10B122008981	NonProperStrand	44	chr4	131865855	131865933	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.2687
chr7	117166819	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	chr2	144091819	144091919	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	ProperStrand	549	1	-1.0588
chr5	14252800	14252816	protein_coding	Sema3e	utr3	ENSMUSG00000063531	ProperStrand	125	chr4	131865858	131865888	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.7766
chr11	62416575	62416596	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr15	81536857	81536874	protein_coding	Rangap1	exon	ENSMUSG00000022391	NonProperStrand	35	1	-10.0574
chr6	70794802	70794819	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chr3	108357255	108357320	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-2.8026
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr1	173341933	173341949	protein_coding	Usf1	utr5	ENSMUSG00000026641	NonProperStrand	144	1	-4.2133
chr10	80265170	80265617	protein_coding	Sf3a2	exon	ENSMUSG00000020211	ProperStrand	50	chr10	23505214	23505279	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.4914
chr1	46078109	46078129	protein_coding	Gm4776	utr3	ENSMUSG00000044457	NonProperStrand	24	chr4	131908810	131908857	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-4.7206
chr8	121869602	121871973	protein_coding	Hsbp1	utr3	ENSMUSG00000031839	ProperStrand	4	chr19	8963101	8963191	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-7.6308
chr11	49686380	49686396	protein_coding	Mapk9	exon	ENSMUSG00000020366	NonProperStrand	2	chr4	131908356	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-inf
chr11	104197639	104197870	protein_coding	1700081L11Rik	exon	ENSMUSG00000018412	ProperStrand	73	chr1	191058375	191058393	protein_coding	Kcnk2	intron	ENSMUSG00000037624	ProperStrand	56	1	-13.0585
chr8	23679341	23679373	protein_coding	Slc20a2	utr3	ENSMUSG00000037656	ProperStrand	63	chr16	23111391	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-3.6918
chr17	27250120	27250153	protein_coding	Itpr3	intron	ENSMUSG00000042644	ProperStrand	137	chr16	88561965	88561982	protein_coding	Cldn8	utr3	ENSMUSG00000050520	NonProperStrand	6	1	-16.4244
chr6	122677956	122679414	protein_coding	Slc2a3	utr3	ENSMUSG00000003153	ProperStrand	682	chr7	134671399	134671516	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	2	-5.4575
chr4	137714340	137714359	protein_coding	Eif4g3	exon	ENSMUSG00000028760	NonProperStrand	28	chr4	131908753	131908807	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.4067
chr8	28331503	28331562	LINE	Lx9	L1	chr8Lx928331062	NonProperStrand	1	mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	1	-inf
chr19	5134073	5134089	protein_coding	Pacs1	utr3	ENSMUSG00000024855	ProperStrand	24	chr2	130102060	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-7.1746
chr10	106649956	106650046	LINE	L1Md_F	L1	chr10L1Md_F106649834	NonProperStrand	1	chr10	106649643	106649723	LINE	L1Md_F2	L1	chr10L1Md_F2106647961	NonProperStrand	1	1	-inf
chr4	151730301	151730737	protein_coding	Chd5	exon	ENSMUSG00000005045	NonProperStrand	147	chr9	64984451	64984480	protein_coding	Igdcc4	utr3	ENSMUSG00000032816	ProperStrand	29	1	-12.9867
chr10	115929428	115930764	protein_coding	Cnot2	exon	ENSMUSG00000020166	ProperStrand	12	chr15	98350126	98350216	protein_coding	2310037I24Rik	intron	ENSMUSG00000022992	ProperStrand	91	1	-15.7468
chr17	32453268	32453285	protein_coding	Akap8	exon	ENSMUSG00000024045	ProperStrand	339	chr2	25301217	25301542	protein_coding	Abca2	exon	ENSMUSG00000026944	ProperStrand	57	1	-9.9470
chr13	9833551	9833679	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr18	61555326	61555348	protein_coding	Ppargc1b	intron	ENSMUSG00000033871	NonProperStrand	5	1	-10.0546
chr15	79551034	79551094	protein_coding	Gtpbp1	utr3	ENSMUSG00000042535	ProperStrand	56	chr16	23110968	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-0.9026
chr9	64023397	64023487	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	chr12	60141322	60141402	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-2.4658
chr8	87223594	87223610	protein_coding	Trmt1	exon	ENSMUSG00000001909	NonProperStrand	60	chr3	108357312	108357412	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-4.5400
chr19	9968318	9968385	protein_coding	Incenp	exon	ENSMUSG00000024660	ProperStrand	111	chr2	26493413	26493484	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-4.6121
chr10	75386309	75386393	protein_coding	Mmp11	utr3	ENSMUSG00000000901	ProperStrand	24	chr11	102662460	102662476	protein_coding	Gjc1	exon	ENSMUSG00000034520	NonProperStrand	39	1	-15.9919
chr7	148257735	148257825	protein_coding	B4galnt4	intron	ENSMUSG00000055629	ProperStrand	11	chr9	15119648	15119728	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.8656
chr15	78173664	78173681	protein_coding	Csf2rb	intron	ENSMUSG00000071713	ProperStrand	16	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.1079
chr2	163994409	163994425	protein_coding	Kcns1	exon	ENSMUSG00000040164	ProperStrand	2	chr2	26494714	26494740	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-10.3719
chr9	110845733	110846734	protein_coding	Tdgf1	exon	ENSMUSG00000032494	ProperStrand	218	chr5	115940329	115940350	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	1	-6.1751
chr10	109640049	109640066	SINE	RSINE1	B4	chr10RSINE1109639979	ProperStrand	51	chr1	162965531	162965574	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.5744
chr1	58540730	58540830	protein_coding	Orc2	intron	ENSMUSG00000026037	ProperStrand	20	chr16	23111384	23111416	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.0472
chr1	4839170	4839201	protein_coding	Lypla1	intron	ENSMUSG00000025903	ProperStrand	12	chr5	74489642	74489676	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	2	-11.2950
chr3	13037025	13037115	LINE	Lx2	L1	chr3Lx213036302	NonProperStrand	1	chr6	98799268	98799348	LINE	L1_Mus4	L1	chr6L1_Mus498799229	NonProperStrand	1	1	-inf
chr16	30314714	30314805	protein_coding	Atp13a3	utr3	ENSMUSG00000022533	ProperStrand	45	chr7	148634702	148634782	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-4.5330
chr9	107810701	107813856	protein_coding	Mst1r	exon	ENSMUSG00000032584	NonProperStrand	30	chr2	30302619	30302641	protein_coding	Ppp2r4	utr3	ENSMUSG00000039515	ProperStrand	76	1	-14.2430
chr11	115884513	115884576	protein_coding	H3f3b	utr3	ENSMUSG00000016559	ProperStrand	76	chr10	75719833	75719849	protein_coding	S100b	exon	ENSMUSG00000033208	ProperStrand	20	4	-19.5402
chrX	148492877	148492926	protein_coding	Smc1a	intron	ENSMUSG00000041133	ProperStrand	104	chr19	8963025	8963125	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.4170
chr14	54992723	54993527	protein_coding	Slc7a7	exon	ENSMUSG00000000958	ProperStrand	44	chr4	131908254	131908344	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.8887
chr8	73059031	73059049	protein_coding	Fkbp8	utr3	ENSMUSG00000019428	ProperStrand	52	chr16	23111722	23111822	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.1343
chr13	28653437	28843562	lincRNA	2610307P16Rik	intron	ENSMUSG00000085936	ProperStrand	154	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-3.5537
chr6	47746213	47746249	protein_coding	Pdia4	utr3	ENSMUSG00000025823	ProperStrand	41	chr15	79908977	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	4	-18.6463
chr6	125411253	125411290	protein_coding	Cd9	exon	ENSMUSG00000030342	ProperStrand	81	chr16	23111374	23111464	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	5	-5.7800
chr19	42199431	42199447	protein_coding	Avpi1	exon	ENSMUSG00000018821	NonProperStrand	9	chr16	72800514	72800532	protein_coding	Robo1	intron	ENSMUSG00000022883	NonProperStrand	188	1	-14.9105
chr4	106164708	106164724	protein_coding	Bsnd	utr5	ENSMUSG00000025418	ProperStrand	22	chr15	74407826	74407913	protein_coding	Bai1	exon	ENSMUSG00000034730	ProperStrand	22	1	-17.2821
chr15	81110991	81111009	SINE	ID4	ID	chr15ID481110956	ProperStrand	272	chr16	34724252	34724345	protein_coding	Ccdc14	utr3	ENSMUSG00000022833	ProperStrand	22	1	-12.3158
chr5	42208902	42209013	protein_coding	Bod1l	exon	ENSMUSG00000061755	ProperStrand	43	chr14	33005139	33005184	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-4.6280
chr16	31297623	31300503	protein_coding	Apod	exon	ENSMUSG00000022548	ProperStrand	10	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	2	-14.1357
chr19	57717030	57717046	protein_coding	Atrnl1	utr5	ENSMUSG00000054843	NonProperStrand	11	chr10	23505221	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.1476
chr18	69886977	69886995	LTR	MTA_Mm-int	MaLR	chr18MTA_Mm-int69886247	NonProperStrand	1	chr17	24857715	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-inf
chr8	37401782	37401800	LINE	L1MC1	L1	chr8L1MC137401479	ProperStrand	11	chr4	133251921	133251942	protein_coding	Arid1a	exon	ENSMUSG00000007880	ProperStrand	465	1	-12.6767
chr7	87902409	87902451	protein_coding	Iqgap1	exon	ENSMUSG00000030536	ProperStrand	43	chr18	50031317	50031360	protein_coding	Dmxl1	exon	ENSMUSG00000037416	ProperStrand	27	5	-inf
chr15	99236656	99237053	protein_coding	Tmbim6	exon	ENSMUSG00000023010	ProperStrand	64	chr18	73693109	73693151	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	2	-8.8485
chr13	96491608	96491624	protein_coding	Iqgap2	exon	ENSMUSG00000021676	ProperStrand	19	chr16	23110940	23110957	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7016
chr15	79249364	79256048	protein_coding	Csnk1e	exon	ENSMUSG00000022433	ProperStrand	59	chr2	26494720	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	7	-18.7264
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr8	44273011	44273141	protein_coding	Triml2	intron	ENSMUSG00000091490	ProperStrand	32	1	-7.6226
chr1	88248039	88248063	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chr9	15119372	15119414	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	2	-0.9258
chr1	69642626	69642650	protein_coding	Ikzf2	intron	ENSMUSG00000025997	ProperStrand	11	chr1	162968442	162968494	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-9.5125
chr3	87918911	87919859	protein_coding	Iqgap3	exon	ENSMUSG00000028068	ProperStrand	16	chr9	64023229	64023288	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	1	-11.1260
chr11	99071403	99071490	protein_coding	Smarce1	exon	ENSMUSG00000037935	ProperStrand	38	chr16	23110940	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-2.6677
chr6	3794656	3794675	SINE	B4A	B4	chr6B4A3794525	NonProperStrand	26	chr15	100416584	100416600	protein_coding	Pou6f1	intron	ENSMUSG00000009739	ProperStrand	44	1	-15.6320
chr9	44438160	44438200	protein_coding	Ddx6	exon	ENSMUSG00000032097	ProperStrand	59	chr19	22926636	22926662	protein_coding	Trpm3	intron	ENSMUSG00000052387	ProperStrand	54	2	-19.0682
chr12	47102353	47102372	LINE	Lx3_Mus	L1	chr12Lx3_Mus47101651	ProperStrand	1	chr11	62416622	62416653	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-inf
chr6	72738581	72738597	protein_coding	Tcf7l1	exon	ENSMUSG00000055799	NonProperStrand	8	chr16	23110840	23110897	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.2180
chr7	52713355	52713404	protein_coding	Ftl1	utr3	ENSMUSG00000050708	ProperStrand	807	chr2	158182156	158182241	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	4	-3.6685
chr1	138382212	138382230	protein_coding	Kif14	intron	ENSMUSG00000041498	NonProperStrand	36	chr3	108357255	108357348	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	2	-9.0699
chr5	42136455	42136473	Low_complexity	GA-rich	Low_complexity	chr5GA-rich42136449	NonProperStrand	106	chr2	32818815	32818937	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	2	-7.2850
chr3	37330862	37330917	protein_coding	Spata5	exon	ENSMUSG00000027722	ProperStrand	13	chr2	32819043	32819084	protein_coding	Rpl12	exon	ENSMUSG00000038900	ProperStrand	167	3	-21.0435
chr9	114284497	114284587	protein_coding	Crtap	utr3	ENSMUSG00000032431	ProperStrand	15	chr11	69483151	69483231	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-12.0911
chr1	72758280	72760121	protein_coding	Rpl37a	exon	ENSMUSG00000046330	ProperStrand	94	chr17	24857794	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	4	-6.4297
chr11	102294590	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr2	144091713	144091813	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	ProperStrand	549	3	-10.8081
chr13	9833565	9833664	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr16	21221562	21221741	protein_coding	Ephb3	exon	ENSMUSG00000005958	ProperStrand	23	1	-6.8488
chr15	36092510	36092526	protein_coding	Fbxo43	exon	ENSMUSG00000048230	ProperStrand	1	chr1	181320402	181320423	protein_coding	Smyd3	intron	ENSMUSG00000055067	NonProperStrand	190	1	-inf
chr15	76734743	76734788	protein_coding	Rpl8	exon	ENSMUSG00000003970	ProperStrand	191	chr11	64949314	64949337	protein_coding	Arhgap44	intron	ENSMUSG00000033389	NonProperStrand	30	1	-12.3918
chr9	44143154	44143244	protein_coding	H2afx	exon	ENSMUSG00000049932	ProperStrand	137	chr9	120038576	120038656	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.6627
chr12	102173862	102229830	protein_coding	Ccdc88c	exon	ENSMUSG00000021182	ProperStrand	151	chr4	131865855	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-3.1981
chr6	127837066	127837083	LTR	MTEa	MaLR	chr6MTEa127836769	ProperStrand	9	chr19	42488459	42488520	protein_coding	Crtac1	exon	ENSMUSG00000042401	ProperStrand	26	1	-18.3497
chr4	137212058	137212131	protein_coding	Usp48	utr3	ENSMUSG00000043411	ProperStrand	135	chr2	29014439	29014455	protein_coding	Setx	exon	ENSMUSG00000043535	ProperStrand	187	1	-9.4065
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr7	51505224	51505308	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	1	-1.3178
chr12	104317206	104317223	protein_coding	Unc79	exon	ENSMUSG00000021198	ProperStrand	99	chr4	131908299	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-1.5936
chr17	85482653	85489599	protein_coding	Prepl	utr5	ENSMUSG00000024127	ProperStrand	106	chr7	117190015	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.3333
chr16	91227718	91227735	protein_coding	Olig2	utr3	ENSMUSG00000039830	NonProperStrand	78	chr4	131865912	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-2.6141
chr4	116827119	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	chr8	32260336	32260433	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	5	-2.0257
chr16	23111689	23111712	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	NonProperStrand	47	chr1	89673588	89673688	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	NonProperStrand	27	2	-22.3289
chr2	119636265	119636652	protein_coding	Tyro3	exon	ENSMUSG00000027298	ProperStrand	35	chr11	6428034	6428088	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.1952
chr6	89269327	89269350	protein_coding	Plxna1	utr3	ENSMUSG00000030084	ProperStrand	233	chr14	76247711	76247836	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	4	-6.9933
chr15	100413761	100413851	protein_coding	Pou6f1	exon	ENSMUSG00000009739	ProperStrand	44	chr5	93635229	93635309	protein_coding	Ccni	utr5	ENSMUSG00000063015	ProperStrand	43	1	-14.6277
chr8	114457341	114457369	protein_coding	Tmem231	exon	ENSMUSG00000031951	ProperStrand	17	chr7	52381973	52382010	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-9.2540
chrX	95768186	95768203	protein_coding	Ophn1	intron	ENSMUSG00000031214	NonProperStrand	8	chr19	8963025	8963084	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-6.1145
chr18	80992164	81005435	protein_coding	Atp9b	exon	ENSMUSG00000024566	ProperStrand	30	chr16	23111729	23111809	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-5.3499
chr11	51912466	51912556	protein_coding	Ppp2ca	utr5	ENSMUSG00000020349	ProperStrand	22	chr10	23505178	23505258	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.8416
chr15	96242651	96242703	protein_coding	Scaf11	utr3	ENSMUSG00000033228	ProperStrand	37	chr3	123210889	123210979	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.8922
chr9	21808978	21809020	protein_coding	Prkcsh	exon	ENSMUSG00000003402	ProperStrand	58	chr11	6428088	6428163	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-5.5824
chr9	78326620	78328430	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr1	63225582	63225683	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	8	-9.5036
chr6	146991382	146991398	protein_coding	Mrps35	exon	ENSMUSG00000040112	NonProperStrand	27	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.1241
chr16	23111779	23111837	protein_coding	Eif4a2	intron	ENSMUSG00000022884	ProperStrand	356	chrX	91434463	91434494	protein_coding	Eif2s3x	utr3	ENSMUSG00000035150	ProperStrand	55	1	-9.9210
chr4	86500718	86502644	protein_coding	Rps6	exon	ENSMUSG00000028495	ProperStrand	263	chr16	23110505	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	6	-5.1063
chr18	67561932	67561988	protein_coding	Tubb6	exon	ENSMUSG00000001473	ProperStrand	10	chr12	112779247	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-8.3724
chr10	25192936	25198869	protein_coding	Epb4.1l2	utr5	ENSMUSG00000019978	ProperStrand	105	chr18	35716851	35716883	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-5.6193
chr14	76247753	76247843	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	chr2	166890838	166890858	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	1	-1.6326
chr11	113005356	113005373	lincRNA	2610035D17Rik	intron	ENSMUSG00000087259	NonProperStrand	38	chrX	140808241	140808325	protein_coding-noncoding	Alg13	utr3	ENSMUSG00000041718	ProperStrand	87	1	-13.4909
chr19	29100983	29101063	protein_coding	Ak3	intron	ENSMUSG00000024782	NonProperStrand	13	chr2	158184092	158184182	snoRNA	ENSMUSG00000064995_SNORA71	.	ENSMUSG00000064995	ProperStrand	430	1	-12.4840
chr12	11940544	11940563	LINE	L1_Mus1	L1	chr12L1_Mus111940010	NonProperStrand	2	chr4	131865891	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-inf
chr9	63868722	63868739	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	chr2	26494724	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	4	-1.2503
chr10	41499881	41499912	protein_coding	Cep57l1	intron	ENSMUSG00000019813	ProperStrand	36	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.2156
chr15	102161796	102161864	protein_coding	Pfdn5	utr3	ENSMUSG00000001289	ProperStrand	6	chr1	162965563	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-7.8657
chr16	5256015	5256031	protein_coding	Fam86	utr5	ENSMUSG00000022544	ProperStrand	231	chr17	35088970	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-3.3046
chr4	43505655	43505687	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr3	32461726	32461757	protein_coding	Mfn1	intron	ENSMUSG00000027668	ProperStrand	5	1	-8.0398
chr15	61819108	61819128	protein_coding	Myc	exon	ENSMUSG00000022346	NonProperStrand	4	chr2	130102051	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-10.9807
chr15	88936732	88936776	protein_coding	Tubgcp6	exon	ENSMUSG00000051786	ProperStrand	15	chr16	23111757	23111811	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.3973
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr9	54744384	54745304	protein_coding	Ireb2	exon	ENSMUSG00000032293	ProperStrand	45	1	-9.3686
chr19	32198879	32198940	protein_coding	Sgms1	exon	ENSMUSG00000040451	ProperStrand	10	chr1	173041632	173041649	tRNA	tRNA710-ValCAC	.	1629716	ProperStrand	206	1	-14.5117
chr7	70766769	70766786	protein_coding	Otud7a	intron	ENSMUSG00000033510	ProperStrand	16	chr16	23110843	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.9771
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr19	10620687	10620703	protein_coding	Cpsf7	utr3	ENSMUSG00000034820	ProperStrand	66	1	-5.7165
chrX	159301128	159301218	protein_coding-noncoding	Syap1	utr3	ENSMUSG00000031357	ProperStrand	1	chr15	82980110	82980190	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-inf
chr19	17469255	17469272	protein_coding	Rfk	intron	ENSMUSG00000024712	ProperStrand	4	chr7	13516149	13516204	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	1	-14.3430
chr10	90634119	90634169	protein_coding	Tmpo	utr5	ENSMUSG00000019961	ProperStrand	57	chr7	29136554	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.4519
chr6	124380824	124380928	protein_coding	Clstn3	utr3	ENSMUSG00000008153	ProperStrand	10	chr16	23110977	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-7.6230
chr17	57035738	57036816	protein_coding	Mllt1	exon	ENSMUSG00000024212	ProperStrand	19	chr18	35728779	35728850	protein_coding	Matr3	intron	ENSMUSG00000037236	ProperStrand	90	2	-inf
chr9	21607505	21609170	protein_coding	Dock6	exon	ENSMUSG00000032198	ProperStrand	155	chr9	119253615	119255666	protein_coding	Acaa1a	exon	ENSMUSG00000036138	ProperStrand	15	1	-14.2344
chr9	59523384	59523457	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr8	123390094	123390112	protein_coding	Gm20388	intron	ENSMUSG00000092329	ProperStrand	295	1	-4.0829
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	156004964	156005174	protein_coding	Rbm39	utr5	ENSMUSG00000027620	ProperStrand	38	1	-5.3470
chr1	182797566	182797656	protein_coding	BC031781	utr3	ENSMUSG00000038806	ProperStrand	64	chr19	8963097	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.1678
chrX	84483701	84483718	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr11	68886928	68887018	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	4	-2.3451
chr9	23211249	23211267	protein_coding	Bmper	exon	ENSMUSG00000031963	ProperStrand	16	chr15	8952097	8956101	protein_coding	Ranbp3l	exon	ENSMUSG00000048424	ProperStrand	45	1	-16.6081
chr9	53273196	53273223	protein_coding	Atm	exon	ENSMUSG00000034218	ProperStrand	17	chr6	122275520	122275596	protein_coding	Phc1	exon	ENSMUSG00000040669	ProperStrand	158	2	-inf
chr4	94167899	94167999	protein_coding	5830433M19Rik	exon	ENSMUSG00000028578	ProperStrand	5	chr5	121655128	121655157	protein_coding	Rpl6	intron	ENSMUSG00000029614	ProperStrand	332	1	-15.0406
chr6	24684480	24684497	protein_coding	Hyal6	exon	ENSMUSG00000029679	NonProperStrand	114	chr10	127647744	127647789	protein_coding	Spryd4	utr3	ENSMUSG00000051346	ProperStrand	3	1	-18.8256
chr10	83063069	83063159	protein_coding	Appl2	utr3	ENSMUSG00000020263	ProperStrand	15	chr16	23110832	23110912	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.0842
chr18	48207440	48207494	protein_coding	Gm5506	exon	ENSMUSG00000059040	ProperStrand	105	chr7	117189864	117189926	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-5.1152
chr10	61544747	61544837	LTR	RLTR13D6	ERVK	chr10RLTR13D661543977	NonProperStrand	1	chr10	61544971	61545051	SINE	B1F2	Alu	chr10B1F261544992	ProperStrand	1	1	-inf
chr12	106270975	106271065	protein_coding	Glrx5	exon	ENSMUSG00000021102	ProperStrand	3	chr17	26360448	26360528	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	1	-16.4349
chr6	87138823	87154416	protein_coding	Antxr1	exon	ENSMUSG00000033420	ProperStrand	70	chr4	131908809	131908871	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.0215
chr5	76659330	76659347	protein_coding	Clock	exon	ENSMUSG00000029238	NonProperStrand	64	chr2	26493366	26493476	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-3.6227
chr10	116400140	116400156	LTR	LTR16D1	ERVL	chr10LTR16D1116399852	ProperStrand	1	chr11	6428099	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	NonProperStrand	91	1	-inf
chr11	112571058	112571075	lincRNA	BC006965	intron	ENSMUSG00000041674	ProperStrand	16	chr11	62416951	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-8.6998
chr12	85329161	85329261	protein_coding	Acot2	exon	ENSMUSG00000021226	ProperStrand	5	chr19	8799871	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-10.0468
chr4	43048801	43048819	protein_coding	B230312A22Rik	exon	ENSMUSG00000036002	NonProperStrand	5	chr7	29136525	29136600	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-7.2327
chr4	132298845	132298864	protein_coding	Smpdl3b	intron	ENSMUSG00000028885	NonProperStrand	4	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-20.0916
chr18	77277642	77277687	protein_coding	Katnal2	intron	ENSMUSG00000025420	NonProperStrand	9	chr19	8963027	8963057	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.8692
chr1	74470436	74470453	protein_coding	Vil1	exon	ENSMUSG00000026175	ProperStrand	68	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.0504
chr17	26115589	26115606	protein_coding	Solh	intron	ENSMUSG00000037326	ProperStrand	53	chr17	35089181	35089229	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-5.7282
chr14	55516008	55516065	protein_coding	Pabpn1	exon	ENSMUSG00000022194	ProperStrand	22	chr19	8799839	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	2	-11.2085
chr7	52689691	52689728	protein_coding	Ruvbl2	utr5	ENSMUSG00000003868	ProperStrand	41	chr16	23110900	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-3.6651
chr1	158109521	158109541	protein_coding	Fam163a	intron	ENSMUSG00000015484	NonProperStrand	13	chr2	130101987	130102056	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	2	-13.5099
chr11	100569606	100569622	protein_coding	Kat2a	exon	ENSMUSG00000020918	ProperStrand	68	chr8	26879777	26879793	protein_coding	Gm17484	utr3	ENSMUSG00000091514	ProperStrand	68	1	-12.8097
chr11	6240464	6240498	protein_coding	Ogdh	exon	ENSMUSG00000020456	ProperStrand	42	chr18	82773672	82773688	protein_coding	Zfp236	exon	ENSMUSG00000041258	NonProperStrand	117	1	-12.6921
chr14	76247821	76247845	protein_coding	Tpt1	intron	ENSMUSG00000060126	ProperStrand	236	chr12	17552949	17553029	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-2.5595
chr3	105768118	105768208	protein_coding-noncoding	Wdr77	utr5	ENSMUSG00000000561	ProperStrand	2	chr18	35716764	35716844	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-inf
chr13	81846385	81846465	protein_coding	Polr3g	intron	ENSMUSG00000035834	ProperStrand	14	chr9	66224679	66224769	protein_coding	Herc1	intron	ENSMUSG00000038664	NonProperStrand	35	1	-17.3969
chr7	136775266	136775356	protein_coding	Wdr11	exon	ENSMUSG00000042055	ProperStrand	24	chr11	97642975	97643055	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.1417
chr2	91613185	91613203	protein_coding	Ambra1	exon	ENSMUSG00000040506	ProperStrand	65	chr13	20374830	20374847	protein_coding	Elmo1	exon	ENSMUSG00000041112	NonProperStrand	34	1	-14.2940
chr13	9833562	9833652	LINE	L1Md_T	L1	chr13L1Md_T9831266	NonProperStrand	15	chr10	23505189	23505217	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	NonProperStrand	45	1	-16.7241
chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	chr1	9932547	9932623	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	7	-7.5662
chr3	92627671	92627687	protein_coding	Kprp	utr3	ENSMUSG00000059832	NonProperStrand	5	chr7	29136525	29136573	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-7.2327
chr15	29471226	29471243	LINE	Lx4B	L1	chr15Lx4B29471206	ProperStrand	16	chr10	23505149	23505269	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.4264
chr1	58519413	58519447	protein_coding	Nif3l1	intron	ENSMUSG00000026036	NonProperStrand	2	chr13	51743667	51743703	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-14.3107
chr9	42338706	42338725	protein_coding	Grik4	intron	ENSMUSG00000032017	ProperStrand	32	chr9	50687337	50687388	protein_coding	Ppp2r1b	exon	ENSMUSG00000032058	ProperStrand	22	2	-20.7639
chr12	110098556	110098604	protein_coding	Wars	utr3	ENSMUSG00000021266	ProperStrand	12	chr7	117166756	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-8.0340
chr1	158574646	158574736	protein_coding	Abl2	utr3	ENSMUSG00000026596	ProperStrand	37	chr12	76769560	76769640	protein_coding	Wdr89	intron	ENSMUSG00000045690	ProperStrand	7	1	-18.4270
chr5	136437872	136437904	protein_coding	Srcrb4d	intron	ENSMUSG00000029699	ProperStrand	9	chr2	158182156	158182196	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-8.8292
chr11	117886905	117886995	protein_coding	Dnahc17	utr3	ENSMUSG00000033987	ProperStrand	7	chr16	23111741	23111821	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.9463
chr13	55644536	55644636	protein_coding	Fam193b	exon	ENSMUSG00000021495	ProperStrand	51	chr1	34223060	34223118	protein_coding	Dst	exon	ENSMUSG00000026131	ProperStrand	461	1	-9.5572
chr2	155460511	155460577	protein_coding	Trpc4ap	utr3	ENSMUSG00000038324	ProperStrand	38	chr16	23110912	23111002	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.7634
chr10	36711682	36713493	protein_coding	Hdac2	exon	ENSMUSG00000019777	ProperStrand	36	chr1	88423329	88423388	protein_coding	Ptma	utr5	ENSMUSG00000026238	ProperStrand	385	1	-10.6199
chr5	54389950	54389967	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	chr10	117227045	117227061	protein_coding	Nup107	exon	ENSMUSG00000052798	NonProperStrand	66	1	-10.5901
chr18	67575195	67580661	protein_coding	Afg3l2	exon	ENSMUSG00000024527	ProperStrand	43	chr16	23110468	23110548	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.0458
chr9	78023123	78023151	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr13	58400751	58400770	protein_coding	Kif27	intron	ENSMUSG00000060176	ProperStrand	75	1	-5.4409
chr4	154959265	154959328	protein_coding	Nadk	exon	ENSMUSG00000029063	ProperStrand	25	chr6	89285465	89287215	protein_coding	Plxna1	exon	ENSMUSG00000030084	ProperStrand	233	1	-12.3646
chr2	3336354	3336371	protein_coding	Meig1	utr5	ENSMUSG00000026650	ProperStrand	18	chr5	121655127	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-9.9531
chr9	103913186	103913205	protein_coding	Nphp3	intron	ENSMUSG00000032558	ProperStrand	6	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-6.1051
chr15	101914666	101914756	protein_coding	Eif4b	exon	ENSMUSG00000058655	ProperStrand	484	chr3	95980331	95980411	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-2.8844
chr12	74720114	74720204	protein_coding	Prkch	intron	ENSMUSG00000021108	ProperStrand	9	chr16	44175148	44175238	protein_coding	Gm608	intron	ENSMUSG00000068284	NonProperStrand	29	1	-18.5688
chr9	72525196	72556921	protein_coding	Nedd4	exon	ENSMUSG00000032216	ProperStrand	308	chr17	35299507	35299559	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	2	-3.3761
chr19	44188468	44188548	snoRNA	ENSMUSG00000077391_SNORA12	.	ENSMUSG00000077391	ProperStrand	506	chr18	33954828	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	4	-2.5259
chr3	107241335	107241435	protein_coding	Kcnc4	utr3	ENSMUSG00000027895	ProperStrand	4	chr16	23111429	23111500	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-6.3168
chr8	117367425	117367479	protein_coding	Wwox	intron	ENSMUSG00000004637	ProperStrand	41	chr6	97497427	97497503	snoRNA	ENSMUSG00000064724_SNORA63	.	ENSMUSG00000064724	ProperStrand	35	1	-15.1883
chr2	90235319	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr14	34776834	34776850	protein_coding	Rbp3	utr3	ENSMUSG00000041534	NonProperStrand	41	1	-5.1984
chr4	150282528	150283964	protein_coding	Park7	utr5	ENSMUSG00000028964	ProperStrand	9	chr17	13112450	13112540	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-8.3896
chr19	10701185	10701638	protein_coding	Ddb1	exon	ENSMUSG00000024740	ProperStrand	304	chr7	117189957	117190037	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-0.8145
chrX	35885249	35885349	protein_coding	Cul4b	utr3	ENSMUSG00000031095	ProperStrand	31	chr8	113362430	113362483	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	1	-10.5976
chr6	120284174	120284254	protein_coding	Ccdc77	intron	ENSMUSG00000030177	ProperStrand	17	chr2	26494731	26494821	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.5152
chr7	52283768	52283793	protein_coding	Prr12	utr3	ENSMUSG00000046574	ProperStrand	86	chr18	33954843	33954943	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-2.8562
chr7	142889623	142889639	protein_coding	Mki67	exon	ENSMUSG00000031004	ProperStrand	286	chr11	62416589	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-2.3026
chr6	115757991	115758123	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr17	24665421	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	7	-1.1270
chr3	136349144	136349180	protein_coding	Ppp3ca	intron	ENSMUSG00000028161	ProperStrand	45	chr8	98293472	98293648	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	1	-10.5698
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr14	22904402	22904420	protein_coding	1700112E06Rik	intron	ENSMUSG00000063458	NonProperStrand	12	1	-11.8716
chr17	8720218	8720234	protein_coding	Pde10a	intron	ENSMUSG00000023868	ProperStrand	25	chr8	64017614	64028377	protein_coding	Palld	exon	ENSMUSG00000058056	NonProperStrand	125	1	-13.6081
chr19	9968284	9968384	protein_coding	Incenp	exon	ENSMUSG00000024660	ProperStrand	111	chr19	8799025	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-4.6389
chr5	31495703	31495772	protein_coding	Snx17	utr5	ENSMUSG00000029146	ProperStrand	5	chr2	144087323	144087413	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-11.6878
chr11	106122588	106122756	protein_coding	Psmc5	exon	ENSMUSG00000020708	ProperStrand	51	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-2.8541
chr7	16902555	16902624	protein_coding	Bbc3	utr3	ENSMUSG00000002083	ProperStrand	9	chr4	131866155	131866245	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-7.4218
chr4	102853012	102853030	protein_coding	Slc35d1	intron	ENSMUSG00000028521	ProperStrand	33	chr15	79908929	79908954	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-6.6538
chr15	60661082	60661099	lincRNA	9930014A18Rik	exon	ENSMUSG00000044513	ProperStrand	54	chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	1	-9.7006
chr16	91639586	91639621	protein_coding	Gart	exon	ENSMUSG00000022962	ProperStrand	200	chr2	166890562	166890582	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-5.1886
chr6	140540278	140542115	protein_coding	Plekha5	exon	ENSMUSG00000030231	ProperStrand	33	chr7	52382753	52382774	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	2	-12.7117
chr9	120038552	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	chr8	34802396	34802414	snoRNA	ENSMUSG00000088856_SNORA48	.	ENSMUSG00000088856	ProperStrand	236	2	-1.8374
chr8	71634657	71634747	antisense	Gm15717	.	ENSMUSG00000090108	ProperStrand	1	chr8	71634310	71634400	protein_coding	Atp6v1b2	intron	ENSMUSG00000006273	ProperStrand	29	1	-inf
chr16	17899601	17899617	protein_coding	Tssk2	exon	ENSMUSG00000045521	ProperStrand	1	chr17	35299565	35299629	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-inf
chr6	8186051	8186068	protein_coding	Mios	utr3	ENSMUSG00000042447	NonProperStrand	40	chr11	6428089	6428155	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.9420
chr19	11271200	11271217	protein_coding	Ms4a13	utr5	ENSMUSG00000057240	ProperStrand	59	chr7	117190015	117190045	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.3631
chr9	24549540	24549605	protein_coding	Tbx20	intron	ENSMUSG00000031965	NonProperStrand	110	chr19	8963079	8963195	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-2.5435
chr3	95038243	95038280	protein_coding	Cdc42se1	utr3	ENSMUSG00000046722	ProperStrand	12	chr10	110918549	110918640	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	7	-inf
chr12	4295790	4295808	protein_coding	Ncoa1	exon	ENSMUSG00000020647	ProperStrand	38	chr2	155075669	155075728	protein_coding	Pigu	intron	ENSMUSG00000038383	ProperStrand	14	1	-17.3558
chr3	55772264	55787679	protein_coding	Nbea	utr5	ENSMUSG00000027799	ProperStrand	53	chr2	130103751	130103801	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-8.7203
chr4	43505723	43505795	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr4	138576794	138576810	protein_coding	Tmco4	exon	ENSMUSG00000041143	ProperStrand	47	1	-3.5151
chr4	133742939	133742956	protein_coding	Ccdc21	utr5	ENSMUSG00000037443	ProperStrand	112	chr1	39425024	39425081	protein_coding	Rpl31	exon	ENSMUSG00000073702	ProperStrand	41	1	-12.8302
chr17	39979940	39980007	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr11	58682475	58682491	protein_coding	2810021J22Rik	utr5	ENSMUSG00000020491	ProperStrand	162	1	-5.2700
chr17	88036678	88036766	protein_coding	Epcam	intron	ENSMUSG00000045394	ProperStrand	43	chr9	15118331	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-4.0886
chr7	133908929	133908971	protein_coding	Mapk3	utr3	ENSMUSG00000063065	ProperStrand	9	chr19	8963027	8963078	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-9.7258
chrX	19683228	19683244	protein_coding	Slc9a7	exon	ENSMUSG00000037341	NonProperStrand	136	chr1	162965530	162965588	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.8777
chr11	3164798	3164824	protein_coding	Drg1	exon	ENSMUSG00000020457	ProperStrand	19	chr15	79908954	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-7.7665
chr5	64715753	64715843	protein_coding	Tbc1d1	exon	ENSMUSG00000029174	ProperStrand	44	chr1	129271716	129271796	snoRNA	ENSMUSG00000065687_snoU6-53	.	ENSMUSG00000065687	ProperStrand	78	1	-13.4151
chr8	80041484	80041501	protein_coding	Arhgap10	intron	ENSMUSG00000037148	ProperStrand	58	chr1	162965980	162965999	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-3.6661
mmu-miR-6240	1	25	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr16	92808636	92808654	protein_coding	Runx1	intron	ENSMUSG00000022952	NonProperStrand	17	1	-8.4333
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	43430202	43430220	protein_coding	Rusc2	intron	ENSMUSG00000035969	ProperStrand	22	1	-6.4314
chr5	31176971	31177021	protein_coding	Tmem214	exon	ENSMUSG00000038828	ProperStrand	9	chr2	130101987	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	4	-18.8785
chr9	83678799	83681879	protein_coding	Elovl4	exon	ENSMUSG00000032262	ProperStrand	159	chr4	131865446	131865493	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-2.2622
chr4	137096591	137096691	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	chr7	52381972	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	2	-3.4368
chr15	98350144	98350253	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	chr1	9932550	9932618	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	2	-0.9361
chr3	126248224	126248242	LINE	Lx4A	L1	chr3Lx4A126247690	ProperStrand	1	chr16	23110828	23110906	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr17	29769470	29769516	protein_coding	Ftsjd2	intron	ENSMUSG00000024019	ProperStrand	31	chr15	98350146	98350186	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	2	-9.8640
chr1	136485514	136525190	protein_coding	Kdm5b	utr5	ENSMUSG00000042207	ProperStrand	223	chr4	131865869	131865986	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	6	-3.8058
chr14	61648824	61648841	protein_coding	Tnfrsf19	intron	ENSMUSG00000060548	ProperStrand	34	chr4	116828379	116828453	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-9.5250
chr11	6523906	6523922	protein_coding	Tbrg4	exon	ENSMUSG00000000384	NonProperStrand	56	chr11	115128414	115128431	protein_coding	Grin2c	utr5	ENSMUSG00000020734	ProperStrand	12	1	-16.7620
chr5	22080666	22080744	lincRNA	6030443J06Rik	intron	ENSMUSG00000087558	ProperStrand	19	chr12	17552950	17553040	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-7.3736
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr1	46145701	46145721	protein_coding	Dnahc7b	intron	ENSMUSG00000041144	ProperStrand	8	1	-11.9238
chr18	37911790	37911806	protein_coding	Pcdhga9	intron	ENSMUSG00000023036	ProperStrand	245	chr9	15118322	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-1.1723
chr2	29003744	29003760	protein_coding	Setx	exon	ENSMUSG00000043535	NonProperStrand	2	chr13	51743642	51743703	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	2	-inf
chr1	174127267	174128753	protein_coding	Pea15a	utr3	ENSMUSG00000013698	ProperStrand	15	chr16	23110861	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-13.8679
chr17	35088907	35089020	processed_transcript	1110038B12Rik	.	ENSMUSG00000092203	ProperStrand	126	chr2	145076804	145209253	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-6.2528
chr17	29850008	29850108	protein_coding	1110021J02Rik	intron	ENSMUSG00000024018	ProperStrand	7	chr3	82816757	82816774	protein_coding	Fgg	exon	ENSMUSG00000033860	NonProperStrand	321	1	-14.3766
chr9	77957920	77958000	protein_coding	Ick	intron	ENSMUSG00000009828	NonProperStrand	4	chr9	70330554	70330644	protein_coding	Rnf111	intron	ENSMUSG00000032217	NonProperStrand	13	1	-19.7889
chr6	128385740	128385830	protein_coding	Fkbp4	exon	ENSMUSG00000030357	ProperStrand	114	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-7.6448
chr1	58478062	58478078	protein_coding	Clk1	exon	ENSMUSG00000026034	NonProperStrand	3	chr7	67125761	67125830	snoRNA	ENSMUSG00000089375_Snord107	.	ENSMUSG00000089375	ProperStrand	451	1	-15.6616
chr7	16833753	16833770	protein_coding	C5ar1	exon	ENSMUSG00000049130	NonProperStrand	1	chr2	158185580	158185653	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-inf
chr6	29108186	29108866	protein_coding	Rbm28	exon	ENSMUSG00000029701	ProperStrand	24	chr16	23110964	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-5.9609
chr8	4523849	4523940	protein_coding	Lass4	utr3	ENSMUSG00000008206	ProperStrand	6	chr1	63225578	63225658	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-11.4075
chr4	86500749	86500831	protein_coding	Rps6	exon	ENSMUSG00000028495	ProperStrand	263	chr6	71832593	71832683	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-2.8386
chr2	181116853	181116904	protein_coding	Lime1	utr5	ENSMUSG00000090077	ProperStrand	7	chr5	74489564	74489654	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	2	-13.1177
chr9	78023109	78023144	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr3	89237487	89237534	protein_coding	Pygo2	utr3	ENSMUSG00000047824	ProperStrand	7	2	-16.4225
chr2	91734648	91734728	protein_coding	Ambra1	intron	ENSMUSG00000040506	NonProperStrand	6	chr1	52905697	52905787	protein_coding	Hibch	intron	ENSMUSG00000041426	ProperStrand	9	1	-18.9485
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chrX	152009278	152009294	protein_coding	Ptchd1	exon	ENSMUSG00000041552	NonProperStrand	294	1	-1.6734
chr11	97889699	97890725	protein_coding	Rpl19	exon	ENSMUSG00000017404	ProperStrand	120	chr1	162965991	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	3	-6.3090
chr11	4072623	4072727	protein_coding	Sf3a1	intron	ENSMUSG00000002129	ProperStrand	78	chr1	94756329	94756349	protein_coding	Gpc1	utr3	ENSMUSG00000034220	ProperStrand	30	4	-inf
chr4	125842765	125842813	protein_coding	Thrap3	exon	ENSMUSG00000043962	ProperStrand	84	chr16	23111733	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-5.8809
chr6	143429777	143429793	LINE	L1MA4	L1	chr6L1MA4143429728	ProperStrand	39	chr13	18307095	18307132	protein_coding	Pou6f2	intron	ENSMUSG00000009734	ProperStrand	4	1	-18.5776
chr13	108869240	108869334	protein_coding	Ndufaf2	intron	ENSMUSG00000068184	ProperStrand	11	chrX	34622906	34622942	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-10.5919
chr9	114679451	114679468	protein_coding	Cmtm7	intron	ENSMUSG00000032436	ProperStrand	13	chr19	8800420	8800461	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-6.5148
chr7	67123693	67123737	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	chr3	88497863	88497979	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-3.8039
chr7	112782969	112782985	protein_coding	Arfip2	utr3	ENSMUSG00000030881	ProperStrand	191	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-8.1121
chr13	97705760	97705781	protein_coding	Gcnt4	intron	ENSMUSG00000091387	ProperStrand	4	chr10	90581084	90581174	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-10.4109
chr7	31895791	31899711	protein_coding	Hpn	utr5	ENSMUSG00000001249	ProperStrand	126	chr6	28778824	28778841	protein_coding	Lrrc4	utr3	ENSMUSG00000049939	ProperStrand	9	1	-15.6969
chr12	16946854	16946921	snoRNA	ENSMUSG00000064620_SNORA32	.	ENSMUSG00000064620	ProperStrand	165	chr4	116827120	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-5.0559
chr7	87460878	87460978	protein_coding	Prc1	utr3	ENSMUSG00000038943	ProperStrand	35	chr7	118219575	118219622	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-5.2089
chr16	4114850	4114940	protein_coding	Crebbp	exon	ENSMUSG00000022521	ProperStrand	56	chr16	23111404	23111484	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.3551
chr11	62416575	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	chr15	98350180	98350286	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	13	-3.1042
chr11	115446400	115446453	protein_coding	Gga3	utr3	ENSMUSG00000020740	ProperStrand	44	chr11	69481364	69481464	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.7716
chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	chr12	88778723	88778768	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-1.7683
chr6	35239916	35251726	protein_coding	Slc13a4	exon	ENSMUSG00000029843	ProperStrand	19	chr11	116704532	116704551	protein_coding	Jmjd6	utr5	ENSMUSG00000056962	ProperStrand	92	1	-14.7974
chr9	21543998	21544135	protein_coding	Ldlr	exon	ENSMUSG00000032193	ProperStrand	60	chr18	35716697	35716787	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-8.1357
chr3	132335020	132335110	protein_coding	Aimp1	exon	ENSMUSG00000028029	ProperStrand	4	chr8	98269982	98270062	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-11.1714
chr4	6320198	6320236	protein_coding	Sdcbp	exon	ENSMUSG00000028249	ProperStrand	10	chr17	35087894	35087946	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	3	-20.0320
chr16	92742203	92742221	protein_coding	Runx1	intron	ENSMUSG00000022952	NonProperStrand	17	chr17	6232006	6232022	protein_coding	Tulp4	exon	ENSMUSG00000034377	NonProperStrand	265	1	-12.8971
chr11	116153837	116155324	protein_coding	Exoc7	exon	ENSMUSG00000020792	ProperStrand	24	chr17	66468411	66468427	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	1	-11.7100
chr2	158185574	158185666	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chrX	34622906	34623034	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	15	-3.0735
chr9	43005872	43005890	protein_coding	Pou2f3	intron	ENSMUSG00000032015	ProperStrand	12	chr9	78327782	78327877	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-9.5907
chr1	10141947	10143475	protein_coding	Arfgef1	exon	ENSMUSG00000067851	NonProperStrand	27	chr7	4981821	4981852	protein_coding	Zfp865	exon	ENSMUSG00000074405	ProperStrand	15	1	-17.7972
chr2	23366846	23366863	protein_coding	Spopl	exon	ENSMUSG00000026771	ProperStrand	5	chr1	42754186	42754319	protein_coding	Pou3f3	exon	ENSMUSG00000045515	NonProperStrand	117	1	-17.0699
chr5	123622050	123622066	protein_coding	Hpd	exon	ENSMUSG00000029445	ProperStrand	254	chr2	26494709	26494761	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-1.7649
chr9	61257106	61257206	protein_coding	Tle3	exon	ENSMUSG00000032280	ProperStrand	88	chr2	166890522	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-6.7963
chr4	84113752	84113804	protein_coding	Bnc2	intron	ENSMUSG00000028487	ProperStrand	76	chr4	131866155	131866245	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	4	-10.9770
chr19	8963203	8963224	miRNA	Mir5136	.	ENSMUSG00000093314	ProperStrand	45	chr4	131908809	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-3.0502
chr10	79173100	79173387	protein_coding	Bsg	exon	ENSMUSG00000023175	ProperStrand	107	chr12	112779159	112779223	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-3.6819
chr16	45627798	45627817	protein_coding	BC016579	utr3	ENSMUSG00000033187	ProperStrand	13	chr16	23110829	23110889	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-4.2316
chr19	47327689	47327705	protein_coding	Neurl1a	exon	ENSMUSG00000006435	NonProperStrand	5	chr3	5573143	5573251	protein_coding	Pxmp3	intron	ENSMUSG00000040374	ProperStrand	1	1	-inf
chr18	12352675	12352785	protein_coding	Npc1	exon	ENSMUSG00000024413	ProperStrand	14	chr16	23110829	23110874	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.2008
chr2	89368462	89368481	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	chr3	123210853	123210983	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	5	-2.8989
chr5	136611800	136611816	protein_coding	Lrwd1	exon	ENSMUSG00000029703	NonProperStrand	51	chr1	91441810	91441829	protein_coding	Agap1	intron	ENSMUSG00000055013	NonProperStrand	32	1	-14.9224
chr13	53428320	53428345	protein_coding	Sptlc1	utr3	ENSMUSG00000021468	ProperStrand	33	chr7	116663634	116663694	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.5837
chr17	28958222	28958239	protein_coding	Brpf3	exon	ENSMUSG00000063952	ProperStrand	32	chr4	57706987	57707003	protein_coding	Palm2	intron	ENSMUSG00000090053	NonProperStrand	187	1	-12.3037
chr18	10052128	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr2	158185597	158185655	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-2.2756
chr9	57253860	57253877	SINE	B1_Mm	Alu	chr9B1_Mm57253847	ProperStrand	39	chr19	4861477	4861602	protein_coding	Actn3	exon	ENSMUSG00000006457	ProperStrand	2	1	-20.0516
chr7	29137249	29137608	protein_coding	Rps16	exon	ENSMUSG00000037563	ProperStrand	191	chr8	73419654	73419754	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-2.4065
chr14	55236662	55236685	protein_coding	Psmb5	utr5	ENSMUSG00000022193	ProperStrand	14	chr7	26115744	26115760	protein_coding	Megf8	exon	ENSMUSG00000045039	ProperStrand	100	1	-15.2784
chr5	148113281	148113297	protein_coding	Cdx2	utr3	ENSMUSG00000029646	ProperStrand	276	chr15	79908929	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	2	-4.5987
chr4	43505699	43505779	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr14	69867371	69867461	protein_coding	Slc25a37	intron	ENSMUSG00000034248	ProperStrand	37	1	-3.9620
chr11	78313939	78313956	protein_coding	Vtn	exon	ENSMUSG00000017344	ProperStrand	188	chr18	33954816	33954915	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-1.5752
chr9	107851629	107851648	protein_coding	Camkv	utr3	ENSMUSG00000032936	NonProperStrand	2	chr4	87988203	87990552	protein_coding	BC057079	exon	ENSMUSG00000038368	ProperStrand	52	1	-21.4697
chr14	20582923	20583033	protein_coding	Nid2	exon	ENSMUSG00000021806	ProperStrand	372	chr9	121308905	121308923	protein_coding	Trak1	intron	ENSMUSG00000032536	ProperStrand	152	4	-inf
chr17	33955113	33955129	protein_coding	Kank3	exon	ENSMUSG00000042099	ProperStrand	64	chr9	15118245	15118303	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.3484
chr7	145589153	145589170	protein_coding	Tcerg1l	exon	ENSMUSG00000091002	NonProperStrand	3	chr11	68886972	68887032	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-10.4040
chr4	131399490	131399506	protein_coding	Mecr	exon	ENSMUSG00000028910	NonProperStrand	109	chr2	26493361	26493479	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-4.6613
chr4	33276377	33276393	protein_coding	Pm20d2	utr5	ENSMUSG00000054659	ProperStrand	19	chr16	23111447	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-5.4620
chr11	69870769	69870785	protein_coding	Asgr1	exon	ENSMUSG00000020884	NonProperStrand	145	chr18	73693165	73693187	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-3.8359
chr5	37359718	37359808	protein_coding	Wfs1	exon	ENSMUSG00000039474	ProperStrand	23	chr7	29136525	29136599	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	4	-13.4986
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr16	38548549	38548568	protein_coding	Poglut1	exon	ENSMUSG00000034064	ProperStrand	8	1	-8.5166
chr15	57755224	57755262	protein_coding	Wdr67	intron	ENSMUSG00000022364	ProperStrand	11	chr9	15119647	15119704	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.8656
chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	chr15	98356819	98356913	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	3	-2.2788
chr11	69571675	69571765	protein_coding	Polr2a	utr5	ENSMUSG00000005198	ProperStrand	200	chr11	98878374	98878454	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-3.9615
chr2	26493421	26493521	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr12	81492599	81492652	snoRNA	ENSMUSG00000088158_Scarna3b	.	ENSMUSG00000088158	ProperStrand	147	1	-4.4554
chr6	121609392	121609938	protein_coding	A2m	exon	ENSMUSG00000030111	ProperStrand	17	chr7	108971290	108971306	protein_coding	Inppl1	utr3	ENSMUSG00000032737	ProperStrand	272	1	-12.8465
chr4	133163864	133163903	protein_coding	Zdhhc18	utr3	ENSMUSG00000037553	ProperStrand	51	chr14	33005038	33005079	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-4.3012
chr5	120889875	120889892	protein_coding	Lhx5	intron	ENSMUSG00000029595	NonProperStrand	106	chr1	162965531	162965554	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.2816
chr7	17040701	17040717	protein_coding	Tmem160	exon	ENSMUSG00000019158	ProperStrand	55	chr9	15118244	15118270	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.6272
chr11	100284517	100284533	protein_coding	Fkbp10	exon	ENSMUSG00000001555	ProperStrand	3	chr11	62416598	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-11.4760
chrX	140776959	140777218	protein_coding-noncoding	Alg13	utr3	ENSMUSG00000041718	ProperStrand	87	chr6	72738179	72738196	protein_coding	Tcf7l1	intron	ENSMUSG00000055799	ProperStrand	61	1	-12.5336
chr2	71738899	71738950	protein_coding	Pdk1	utr3	ENSMUSG00000006494	ProperStrand	37	chr18	35716829	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-5.2115
chr2	79843543	79843559	protein_coding	Pde1a	intron	ENSMUSG00000059173	NonProperStrand	275	chr9	15118323	15118343	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-1.0229
chr16	36034857	36034898	protein_coding	Kpna1	utr3	ENSMUSG00000022905	ProperStrand	38	chr3	96528194	96528294	snoRNA	ENSMUSG00000065669_SNORA5	.	ENSMUSG00000065669	ProperStrand	180	7	-inf
chr7	133938948	133942611	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	chr16	23111369	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	25	-7.4443
chr7	52382234	52382315	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	chr6	124665351	124665473	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	2	-3.9549
chr5	147646719	147646844	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	chr1	89673511	89673706	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	5	-1.2248
chr10	23505149	23505222	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	chr7	88674753	88674831	snoRNA	ENSMUSG00000093107_AC167122.1	.	ENSMUSG00000093107	ProperStrand	110	6	-5.5849
chr9	123763783	123763799	protein_coding	Xcr1	utr3	ENSMUSG00000060509	NonProperStrand	40	chr11	106362638	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-8.2160
chr17	59135251	59135268	LTR	ORR1A2	MaLR	chr17ORR1A259135069	NonProperStrand	12	chr11	75568235	75568303	protein_coding	Ywhae	intron	ENSMUSG00000020849	ProperStrand	176	1	-14.4389
chr7	19622087	19622116	protein_coding	Sympk	exon	ENSMUSG00000023118	ProperStrand	43	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-7.6477
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr18	89038872	89038906	protein_coding	Socs6	exon	ENSMUSG00000056153	ProperStrand	12	1	-12.1199
chr10	79879959	79880062	protein_coding	Tcf3	exon	ENSMUSG00000020167	NonProperStrand	24	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	1	-8.8687
chr6	120432385	120432401	protein_coding	Il17ra	exon	ENSMUSG00000002897	ProperStrand	61	chr7	134279519	134279543	protein_coding	Spn	utr3	ENSMUSG00000051457	ProperStrand	9	1	-17.0548
chr13	98263109	98263174	lincRNA	Gm11019	intron	ENSMUSG00000078952	ProperStrand	113	chr6	115905151	115905185	protein_coding	Plxnd1	utr3	ENSMUSG00000030123	ProperStrand	10	2	-22.8456
chr5	60972527	60972607	LINE	Lx3A	L1	chr5Lx3A60972538	ProperStrand	1	chr5	60972210	60972300	LINE	Lx8	L1	chr5Lx860971909	NonProperStrand	1	1	-inf
chr2	32543004	32543180	protein_coding	Fpgs	exon	ENSMUSG00000009566	ProperStrand	8	chr16	23111423	23111503	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.8232
chr8	49014621	49014642	protein_coding	Wwc2	intron	ENSMUSG00000031563	ProperStrand	37	chr17	26360446	26360514	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	1	-11.0037
chr10	40191835	40191899	protein_coding	Cdk19	intron	ENSMUSG00000038481	ProperStrand	34	chr9	15118323	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-4.5374
chr5	20400642	20400661	protein_coding	Rsbn1l	utr3	ENSMUSG00000039968	ProperStrand	17	chr9	120039546	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-5.7441
chr5	17389504	17389520	protein_coding	Cd36	intron	ENSMUSG00000002944	NonProperStrand	2	chr18	35714172	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-10.7439
chr16	4886395	4886411	protein_coding	Mgrn1	exon	ENSMUSG00000022517	NonProperStrand	157	chr6	85415984	85416016	protein_coding	Cct7	exon	ENSMUSG00000030007	ProperStrand	173	1	-9.2602
chr9	119336623	119336678	protein_coding	Acvr2b	exon	ENSMUSG00000061393	ProperStrand	21	chr1	162966832	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	3	-19.1814
chr13	45002100	45002905	protein_coding	Jarid2	exon	ENSMUSG00000038518	ProperStrand	372	chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	1	-4.5318
chr6	131330481	131330571	protein_coding	Csda	intron	ENSMUSG00000030189	ProperStrand	86	chr10	110918547	110918633	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-2.8017
chr7	17434192	17434393	protein_coding	Prkd2	exon	ENSMUSG00000041187	ProperStrand	9	chr7	52381759	52381792	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-11.4508
chr17	68170964	68171026	protein_coding	Lama1	exon	ENSMUSG00000032796	ProperStrand	168	chr3	153575089	153575109	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	2	-10.4235
chr6	70794803	70794819	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	1	-7.6063
chr12	110889662	110889681	snoRNA	ENSMUSG00000064496_SNORD113	.	ENSMUSG00000064496	ProperStrand	37	chr16	23110827	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.7935
chr12	110899361	110899443	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr11	97641452	97641502	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	1	-3.3679
chr5	115695943	115722357	protein_coding	Rnf10	exon	ENSMUSG00000041740	ProperStrand	95	chr16	23111374	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-3.6365
chrX	91435146	91435182	protein_coding	Eif2s3x	utr3	ENSMUSG00000035150	NonProperStrand	83	chr7	116664800	116664927	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	4	-7.6517
chr13	88569462	88569482	LTR	RMER6D	ERVK	chr13RMER6D88569354	ProperStrand	42	chr11	97642952	97643061	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	4	-10.7062
chr5	65210079	65210095	protein_coding	Klf3	intron	ENSMUSG00000029178	ProperStrand	56	chr7	117190017	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.4587
chr1	62686775	62686791	protein_coding	Pard3b	utr3	ENSMUSG00000046526	ProperStrand	31	chr3	96132449	96132514	snRNA	ENSMUSG00000075978_U1	.	ENSMUSG00000075978	ProperStrand	132	1	-13.0644
chr12	29318657	29319110	protein_coding	Rps7	exon	ENSMUSG00000061477	ProperStrand	129	chr5	147646786	147646811	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	2	-10.4095
chr10	90432659	90432677	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	chr8	73419649	73419743	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-1.0138
chr12	74210230	74210252	protein_coding	Six4	exon	ENSMUSG00000034460	ProperStrand	33	chr16	23111777	23111828	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.9163
chr6	28824903	28824964	protein_coding	Snd1	exon	ENSMUSG00000001424	NonProperStrand	14	chr9	120038610	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	NonProperStrand	28	1	-17.7830
chr13	55445466	55445546	protein_coding	Lman2	utr3	ENSMUSG00000021484	ProperStrand	26	chr2	144087324	144087414	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-8.2197
chr1	87804236	87804305	protein_coding	Itm2c	utr3	ENSMUSG00000026223	ProperStrand	21	chr18	73693169	73693187	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-7.6156
chr11	50069685	50069775	protein_coding	Maml1	utr3	ENSMUSG00000050567	ProperStrand	29	chr19	8963030	8963110	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.5658
chrX	37318100	37318122	processed_transcript	Gm14643	.	ENSMUSG00000086157	ProperStrand	3	chr2	91436227	91436335	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-13.8627
chr2	41199970	41199989	protein_coding	Lrp1b	exon	ENSMUSG00000049252	ProperStrand	376	chr4	131865855	131865978	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	9	-3.8901
chr2	152104978	152106130	protein_coding	Csnk2a1	utr3	ENSMUSG00000074698	ProperStrand	91	chr17	24857721	24857817	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	46	-19.8607
chr18	35714180	35714270	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	chr7	89110592	89110629	snoRNA	ENSMUSG00000089111_SNORA74	.	ENSMUSG00000089111	ProperStrand	7	1	-7.7147
chr8	125014755	125014813	protein_coding	Fam38a	exon	ENSMUSG00000014444	ProperStrand	132	chr2	26494708	26494759	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.7777
chr17	35299507	35299561	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	chr1	162968214	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	8	-4.5477
chr16	8660114	8660214	protein_coding	Carhsp1	utr3	ENSMUSG00000008393	NonProperStrand	4	chr8	73419657	73419709	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-8.6136
chr8	125731536	125731552	protein_coding	Gm20388	intron	ENSMUSG00000092329	ProperStrand	295	chr18	73693168	73693187	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-2.5621
chr5	114193184	114193269	protein_coding	Sart3	exon	ENSMUSG00000018974	ProperStrand	50	chr6	50249425	50250927	protein_coding	Osbpl3	exon	ENSMUSG00000029822	ProperStrand	34	1	-14.8135
chr1	190267301	190267317	protein_coding	Ush2a	exon	ENSMUSG00000026609	NonProperStrand	60	chr4	131908811	131908868	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.2237
chr9	62992379	62992395	protein_coding	Skor1	exon	ENSMUSG00000022245	NonProperStrand	70	chr2	179992146	179992368	protein_coding	Rps21	utr5	ENSMUSG00000039001	ProperStrand	46	1	-13.5427
chr5	122110870	122110886	protein_coding	Brap	utr5	ENSMUSG00000029458	ProperStrand	36	chr16	23110902	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-2.8301
chr4	134095289	134095311	protein_coding	Sepn1	utr3	ENSMUSG00000050989	ProperStrand	1	chr5	108334194	108334322	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-inf
chr13	58227685	58227765	protein_coding	Hnrnpa0	utr3	ENSMUSG00000007836	ProperStrand	110	chr14	61374229	61374319	protein_coding	Spata13	intron	ENSMUSG00000021990	ProperStrand	28	1	-13.6379
chr11	12153399	12239176	protein_coding	Cobl	intron	ENSMUSG00000020173	ProperStrand	133	chr16	23110838	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	13	-6.7226
chr10	79750982	79751072	protein_coding	Dazap1	utr3	ENSMUSG00000069565	ProperStrand	57	chr18	35714144	35714224	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-3.5373
chr9	40611106	40611175	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr2	130103469	130103502	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	3	-7.7808
chr13	112505785	112505811	protein_coding	Mier3	utr3	ENSMUSG00000032727	ProperStrand	11	chr16	23110550	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.6740
chr12	37556518	37556536	LINE	L2	L2	chr12L237554709	NonProperStrand	3	chr18	73693165	73693187	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-11.8459
chr4	43505658	43505930	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chrX	71517822	71517961	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	12	-1.4798
chr16	91227718	91227735	protein_coding	Olig2	utr3	ENSMUSG00000039830	NonProperStrand	78	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-7.6352
chr1	183853915	183860832	protein_coding	Enah	exon	ENSMUSG00000022995	ProperStrand	196	chr4	131866157	131866247	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-1.6428
chr4	106112082	106112132	protein_coding	Usp24	utr3	ENSMUSG00000028514	ProperStrand	74	chr15	34370545	34370645	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-3.1665
chr14	76372305	76372395	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	chr18	35714166	35714256	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	4	-2.3293
chr8	87223594	87223612	protein_coding	Trmt1	exon	ENSMUSG00000001909	NonProperStrand	60	chr2	26493361	26493451	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-6.3325
chr15	79362330	79366435	protein_coding	Ddx17	exon	ENSMUSG00000055065	ProperStrand	140	chr6	115758050	115758120	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-3.8514
chr13	36209855	36209871	protein_coding	Fars2	utr5	ENSMUSG00000021420	ProperStrand	19	chr17	36097663	36097764	protein_coding	Abcf1	exon	ENSMUSG00000038762	ProperStrand	206	1	-13.1741
chr7	52381973	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	chr11	116938652	116938752	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	4	-3.2506
chr11	96630468	96630565	protein_coding	Snx11	exon	ENSMUSG00000020876	ProperStrand	8	chr7	108440949	108440967	protein_coding	Atg16l2	intron	ENSMUSG00000047767	ProperStrand	121	1	-15.9940
chr17	24665420	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	chr9	120037898	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	11	-1.3344
chr19	5796913	5796981	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr14	124353869	124353886	protein_coding	Itgbl1	exon	ENSMUSG00000032925	ProperStrand	159	1	-5.6212
chr13	38077846	38079391	protein_coding	Ssr1	exon	ENSMUSG00000021427	ProperStrand	65	chr12	60235076	60235166	snoRNA	ENSMUSG00000077505_SNORA26	.	ENSMUSG00000077505	ProperStrand	82	3	-19.8945
chr11	106113768	106113858	protein_coding	Ftsj3	exon	ENSMUSG00000020706	NonProperStrand	3	chr16	57391626	57391716	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	2	-inf
chr1	173332298	173332314	protein_coding	Arhgap30	exon	ENSMUSG00000048865	NonProperStrand	15	chr3	123210921	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-4.5915
chr7	29410070	29410087	protein_coding	C330005M16Rik	intron	ENSMUSG00000037469	ProperStrand	23	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-8.4374
chr4	115670137	115670153	protein_coding	Faah	utr3	ENSMUSG00000034171	ProperStrand	26	chr1	175297744	175297760	protein_coding	Aim2	intron	ENSMUSG00000037860	ProperStrand	16	1	-17.6606
chr12	31985079	31985095	protein_coding	Lamb1	exon	ENSMUSG00000002900	NonProperStrand	45	chr17	45704136	45704155	protein_coding	Slc35b2	exon	ENSMUSG00000037089	ProperStrand	55	1	-14.0663
chr11	50117999	50121005	protein_coding	Canx	exon	ENSMUSG00000020368	ProperStrand	296	chr12	106269289	106269389	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	3	-4.1639
chr7	28146782	28146798	protein_coding	Spnb4	exon	ENSMUSG00000011751	NonProperStrand	84	chr1	59539683	59539700	protein_coding	Fzd7	utr5	ENSMUSG00000041075	ProperStrand	373	1	-8.9783
chr5	110587914	110587931	lincRNA	Gm15787	intron	ENSMUSG00000086247	ProperStrand	5	chr10	127521220	127521269	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	1	-13.9625
chr2	125389949	125389966	protein_coding	Cep152	exon	ENSMUSG00000068394	ProperStrand	60	chr9	15118245	15118305	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.4666
chr17	27157859	27157879	protein_coding	Bak1	utr3	ENSMUSG00000057789	ProperStrand	17	chr12	17552949	17553039	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	5	-20.3192
chr18	44555634	44555651	protein_coding	Dcp2	exon	ENSMUSG00000024472	ProperStrand	44	chr4	131908689	131908771	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-3.1061
chr2	105012751	105012769	protein_coding	Wt1	utr3	ENSMUSG00000016458	NonProperStrand	338	chr7	123475936	123476486	protein_coding	Rps13	exon	ENSMUSG00000090862	ProperStrand	36	1	-10.8800
chr9	122075466	122075482	protein_coding	Snrk	exon	ENSMUSG00000038145	NonProperStrand	97	chr4	21606097	21606114	protein_coding	Prdm13	exon	ENSMUSG00000040478	ProperStrand	51	1	-12.6785
chr6	22609298	22609388	LINE	L1Md_T	L1	chr6L1Md_T22609321	NonProperStrand	1	chr14	80261027	80261117	protein_coding	Gm10845	utr3	ENSMUSG00000075496	ProperStrand	5	1	-inf
chr12	17552976	17552996	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr12	110923174	110923213	snoRNA	ENSMUSG00000084487_SNORD113	.	ENSMUSG00000084487	ProperStrand	183	1	-3.0034
chr8	72702793	72702893	protein_coding	Tmem161a	exon	ENSMUSG00000002342	ProperStrand	42	chr7	150717297	150717348	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	2	-10.0856
chr5	52546355	52546374	protein_coding	Dhx15	intron	ENSMUSG00000029169	ProperStrand	53	chr7	116663649	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-7.1031
chr5	124857121	124858500	protein_coding	Sbno1	exon	ENSMUSG00000038095	ProperStrand	134	chr5	130300470	130300550	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	4	-5.4345
chr8	109941986	109942014	protein_coding	Nob1	exon	ENSMUSG00000003848	ProperStrand	28	chr15	102812274	102812290	protein_coding	Hoxc9	exon	ENSMUSG00000036139	NonProperStrand	2	1	-inf
chr1	123464442	123464468	protein_coding	Ddx18	utr5	ENSMUSG00000001674	ProperStrand	41	chr16	23110852	23110942	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.4411
chr4	130328582	130328599	protein_coding	Pum1	exon	ENSMUSG00000028580	ProperStrand	131	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-7.0375
chr4	135608548	135609286	protein_coding	Rpl11	utr5	ENSMUSG00000059291	ProperStrand	152	chr4	131908236	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-0.8527
chr1	87975363	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	chr12	17552948	17553076	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	3	-3.1810
chr8	96696738	96697038	protein_coding	Mt2	utr5	ENSMUSG00000031762	ProperStrand	71	chr7	76096978	76097039	snoRNA	ENSMUSG00000065940_SNORA21	.	ENSMUSG00000065940	ProperStrand	5	3	-20.2066
chr5	56708446	56708536	LINE	Lx5	L1	chr5Lx556708255	NonProperStrand	1	chr7	54442454	54442534	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	1	-inf
chr17	44238108	44238125	protein_coding	Enpp4	intron	ENSMUSG00000023961	NonProperStrand	11	chr19	8963025	8963084	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.4574
chr5	137801716	137802378	protein_coding	Ephb4	exon	ENSMUSG00000029710	ProperStrand	49	chr16	23111701	23111740	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-3.9967
chr8	87578628	87578645	protein_coding	Tnpo2	exon	ENSMUSG00000031691	ProperStrand	92	chr10	127560220	127560339	protein_coding	Baz2a	exon	ENSMUSG00000040054	ProperStrand	274	1	-9.4112
chr3	104603636	104603683	protein_coding	Mov10	exon	ENSMUSG00000002227	ProperStrand	96	chr15	101754849	101754865	protein_coding	Krt4	exon	ENSMUSG00000059668	ProperStrand	45	1	-12.9499
chr12	15257552	15257642	LINE	Lx9	L1	chr12Lx915257299	NonProperStrand	1	chr18	3378109	3378189	LINE	Lx9	L1	chr18Lx93378088	NonProperStrand	1	1	-inf
chr11	117152149	117152180	protein_coding	Sept9	exon	ENSMUSG00000059248	ProperStrand	60	chr4	131865932	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.7679
chr17	85176308	85176365	protein_coding	Lrpprc	exon	ENSMUSG00000024120	ProperStrand	98	chr1	24621238	24621283	protein_coding	Gm10925	utr3	ENSMUSG00000090378	ProperStrand	320	1	-8.9753
chr11	82692475	82692491	protein_coding	Rad51l3	exon	ENSMUSG00000018841	ProperStrand	112	chr11	69483135	69483191	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.4601
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr4	133140437	133140501	protein_coding	Gpn2	exon	ENSMUSG00000028848	ProperStrand	6	1	-12.7286
chr1	155073643	155074660	protein_coding	Lamc1	exon	ENSMUSG00000026478	ProperStrand	239	chr10	5992323	5992423	protein_coding	Akap12	exon	ENSMUSG00000038587	ProperStrand	1008	4	-15.3975
chr1	164604688	164640809	protein_coding	Prrc2c	exon	ENSMUSG00000040225	ProperStrand	413	chr11	68887042	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	9	-13.6482
chr15	79054905	79054922	antisense	Gm10863	.	ENSMUSG00000075555	NonProperStrand	2	chr4	131908356	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-8.3123
chr9	103226738	103226786	protein_coding	Topbp1	exon	ENSMUSG00000032555	ProperStrand	81	chr1	162965531	162965588	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-7.1083
chr11	75203732	75203750	protein_coding	Smyd4	exon	ENSMUSG00000018809	ProperStrand	11	chr6	5013996	5027480	protein_coding	Ppp1r9a	exon	ENSMUSG00000032827	ProperStrand	50	1	-17.1246
chr4	126559848	126566767	protein_coding	Zmym4	exon	ENSMUSG00000042446	ProperStrand	94	chr2	26768572	26768724	protein_coding	Rpl7a	exon	ENSMUSG00000062647	ProperStrand	234	1	-9.6831
chr11	58778683	58778755	protein_coding	Trim17	exon	ENSMUSG00000036964	ProperStrand	5	chr16	23111772	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-6.6731
chr3	51054293	51054320	protein_coding	Ccrn4l	exon	ENSMUSG00000023087	ProperStrand	8	chr3	123210878	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-9.7482
chr16	23111810	23111837	protein_coding	Eif4a2	intron	ENSMUSG00000022884	ProperStrand	356	chr14	33005038	33005090	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-1.0571
chr14	47930694	47930714	protein_coding	Mapk1ip1l	exon	ENSMUSG00000021840	ProperStrand	34	chr11	6519830	6519944	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-9.0838
chr2	90235290	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	31565995	31566012	protein_coding	Ift172	exon	ENSMUSG00000038564	NonProperStrand	2	1	-11.8388
chr18	21168515	21168605	protein_coding	Rnf138	intron	ENSMUSG00000024317	ProperStrand	12	chr11	6428039	6428119	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	4	-19.0316
chr14	56258575	56258607	protein_coding	Tm9sf1	intron	ENSMUSG00000002320	ProperStrand	3	chr1	162965536	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-15.8367
chr3	32419102	32419118	protein_coding	Zfp639	exon	ENSMUSG00000027667	NonProperStrand	1	chr17	35089211	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-inf
chr1	164639137	164639208	protein_coding	Prrc2c	exon	ENSMUSG00000040225	ProperStrand	413	chr15	82725599	82725636	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	3	-11.1906
chr4	131866224	131866304	lincRNA	Snhg12	exon	ENSMUSG00000086290	ProperStrand	178	chr19	8799858	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-2.9215
chr18	6112348	6112428	protein_coding	Arhgap12	utr5	ENSMUSG00000041225	ProperStrand	25	chr16	23110916	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.2939
chr1	162966813	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	chr17	35089182	35089232	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	4	-1.4667
chr2	91510968	91511025	protein_coding	Arhgap1	exon	ENSMUSG00000027247	ProperStrand	13	chr11	68887040	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	3	-16.4628
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr7	52382234	52382311	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	3	-7.5480
chr4	128637163	128638658	protein_coding	Adc	exon	ENSMUSG00000028789	ProperStrand	10	chr7	29136537	29136617	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.7572
chr7	142892031	142892131	protein_coding	Mki67	exon	ENSMUSG00000031004	ProperStrand	286	chr9	15119630	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	20	-inf
chr9	53441850	53441884	protein_coding	Cul5	exon	ENSMUSG00000032030	ProperStrand	87	chr2	26768415	26768433	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-4.8797
chr19	5797691	5797732	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr4	122970425	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	2	-3.6228
chrX	99334178	99334200	pseudogene	Gm16471	.	ENSMUSG00000081969	NonProperStrand	1	chr8	73419657	73419757	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-inf
chr9	58305384	58305484	lincRNA	4930461G14Rik	intron	ENSMUSG00000086516	ProperStrand	9	chr3	153573528	153573575	snoRNA	ENSMUSG00000064731_Snord45b	.	ENSMUSG00000064731	ProperStrand	205	1	-14.7387
chr9	120866663	120866770	protein_coding	Ctnnb1	exon	ENSMUSG00000006932	ProperStrand	214	chr1	181067485	181067503	protein_coding	Smyd3	intron	ENSMUSG00000055067	NonProperStrand	190	2	-13.4433
chr17	46861595	46861611	protein_coding	Pex6	exon	ENSMUSG00000002763	ProperStrand	292	chr11	107547822	107547876	protein_coding	Helz	exon	ENSMUSG00000020721	ProperStrand	60	1	-10.1418
chrX	72951958	72952030	LTR	MMERVK10C-int	ERVK	chrXMMERVK10C-int72951575	ProperStrand	6	chr16	23110826	23110874	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-inf
chr11	94871395	94871411	protein_coding	Samd14	utr5	ENSMUSG00000047181	ProperStrand	1	chr15	82980089	82980189	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-inf
chr9	110544350	110544366	protein_coding	Nbeal2	exon	ENSMUSG00000056724	ProperStrand	161	chr17	24665420	24665441	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-3.0942
mmu-miR-1949	2	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr5	130295414	130295552	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	3	-2.8937
chr10	42254659	42254702	protein_coding	Snx3	utr3	ENSMUSG00000019804	ProperStrand	19	chr7	116664872	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-4.6802
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr18	37911790	37911806	protein_coding	Pcdhga9	intron	ENSMUSG00000023036	ProperStrand	245	1	-10.3314
chr17	12879671	12881285	protein_coding	Igf2r	exon	ENSMUSG00000023830	ProperStrand	151	chr17	35647049	35647074	protein_coding	Pou5f1	exon	ENSMUSG00000024406	ProperStrand	104	1	-10.3563
chr19	40523221	40523237	protein_coding	Sorbs1	intron	ENSMUSG00000025006	ProperStrand	25	chr6	71832629	71832685	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-7.3516
chr7	73215411	73215448	protein_coding-noncoding	Snrpa1	utr5	ENSMUSG00000030512	ProperStrand	4	chr3	123210854	123210923	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	4	-inf
chr5	141090405	141090422	protein_coding	Lfng	exon	ENSMUSG00000029570	NonProperStrand	92	chr4	131908256	131908414	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-1.7400
chr19	11015616	11015632	protein_coding	Gpr44	exon	ENSMUSG00000034117	NonProperStrand	118	chr15	79910890	79910917	protein_coding	Rpl3	exon	ENSMUSG00000060036	ProperStrand	8342	1	-2.3917
chr7	36529839	36529856	protein_coding	Dpy19l3	intron	ENSMUSG00000043671	ProperStrand	9	chr12	109460710	109460726	protein_coding	Ccdc85c	intron	ENSMUSG00000084883	ProperStrand	157	1	-15.2702
chr5	77713554	77713601	protein_coding	Rest	utr3	ENSMUSG00000029249	ProperStrand	136	chr18	35716832	35716879	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-1.9328
chr4	41146614	41146858	protein_coding	Ubap2	exon	ENSMUSG00000028433	ProperStrand	292	chr2	144087427	144087451	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	2	-5.9532
chr18	35102289	35102342	protein_coding	Hspa9	intron	ENSMUSG00000024359	ProperStrand	166	chr4	131865403	131865503	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-2.1910
chr9	106592642	106592700	protein_coding	Rad54l2	utr3	ENSMUSG00000040661	ProperStrand	51	chr7	28365593	28365611	protein_coding	2310022A10Rik	exon	ENSMUSG00000049643	ProperStrand	10	1	-17.3736
chr14	80262508	80262525	lincRNA	Gm6999	intron	ENSMUSG00000075495	ProperStrand	265	chr1	162968442	162968512	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-3.2517
chr11	102429293	102429373	SINE	PB1	Alu	chr11PB1102429271	ProperStrand	9	chr2	172178282	172178372	protein_coding	2010011I20Rik	utr3	ENSMUSG00000027495	ProperStrand	3	1	-inf
chr8	40681587	40681603	protein_coding	Msr1	intron	ENSMUSG00000025044	ProperStrand	138	chr13	30633208	30636926	protein_coding	Uqcrfs1	exon	ENSMUSG00000038462	ProperStrand	24	1	-13.4983
chr14	99479039	99479085	protein_coding	Dis3	exon	ENSMUSG00000033166	ProperStrand	17	chr11	120134685	120134701	protein_coding	Bahcc1	exon	ENSMUSG00000039741	ProperStrand	118	1	-14.5183
chr2	79132657	79132674	protein_coding-noncoding	Itga4	utr5	ENSMUSG00000027009	NonProperStrand	118	chr7	116663715	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.4373
mmu-miR-6240	3	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr4	154266635	154266653	protein_coding	Mmel1	intron	ENSMUSG00000058183	ProperStrand	6	1	-10.6285
chr19	5690813	5690871	protein_coding	Map3k11	exon	ENSMUSG00000004054	ProperStrand	12	chr7	118219574	118219601	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-11.9211
chr4	41160816	41160855	protein_coding	Ubap2	utr5	ENSMUSG00000028433	ProperStrand	292	chr1	88252852	88252905	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	2	-6.0885
chr1	59762472	59762501	protein_coding	Nop58	exon	ENSMUSG00000026020	ProperStrand	104	chr6	140603604	140603704	protein_coding	Aebp2	utr3	ENSMUSG00000030232	ProperStrand	34	1	-13.3565
chr11	119207004	119207020	protein_coding	Sgsh	utr3	ENSMUSG00000005043	ProperStrand	67	chr7	88489767	88489820	protein_coding	Rps17	exon	ENSMUSG00000061787	ProperStrand	105	1	-11.9673
chr8	74490911	74490996	protein_coding	Zfp961	intron	ENSMUSG00000052446	ProperStrand	35	chr7	67125763	67125825	snoRNA	ENSMUSG00000089375_Snord107	.	ENSMUSG00000089375	ProperStrand	451	1	-10.3608
chr11	62147620	62187115	protein_coding	Ncor1	exon	ENSMUSG00000018501	ProperStrand	132	chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	3	-16.1697
chr10	90432659	90432679	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	chr11	77996576	77996611	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-3.5212
chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr8	73933196	73933214	protein_coding	Ankle1	exon	ENSMUSG00000046295	ProperStrand	3	1	-12.7981
chr9	59328493	59328573	protein_coding	Arih1	intron	ENSMUSG00000025234	ProperStrand	75	chr4	116862573	116862663	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	1	-8.3963
chr6	92104375	92104391	protein_coding	Nr2c2	exon	ENSMUSG00000005893	ProperStrand	101	chr16	4943177	4943202	protein_coding	Anks3	exon	ENSMUSG00000022515	ProperStrand	4	1	-18.0702
chr18	60937530	60938088	protein_coding	Rps14	exon	ENSMUSG00000024608	ProperStrand	154	chr17	24857716	24857747	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-1.8335
chr11	69002198	69002214	protein_coding	Alox8	exon	ENSMUSG00000020891	NonProperStrand	31	chr16	23111722	23111754	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.0285
chr14	21533585	21533601	protein_coding	2310021P13Rik	utr5	ENSMUSG00000021819	ProperStrand	11	chr17	35087911	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-8.6121
chr18	40365677	40365742	protein_coding	Yipf5	utr3	ENSMUSG00000024487	ProperStrand	8	chr1	40053934	40053951	protein_coding	Map4k4	exon	ENSMUSG00000026074	ProperStrand	348	1	-13.9243
chrX	65963902	65963979	protein_coding	Fmr1	intron	ENSMUSG00000000838	ProperStrand	18	chr9	63868722	63868738	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	3	-18.8271
chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr11	6428067	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	6	-1.5027
chr13	9833564	9833653	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr1	155287297	155287353	snoRNA	ENSMUSG00000064435_SNORA4	.	ENSMUSG00000064435	ProperStrand	263	2	-4.0165
chr9	15120987	15121087	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	chr3	88715215	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-3.7490
chr15	34370602	34370692	protein_coding-noncoding	Rpl30	utr3	ENSMUSG00000058600	ProperStrand	30	chr6	71832629	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-6.9850
chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	1	-6.1681
chr11	102237932	102237983	antisense	Gm11616	.	ENSMUSG00000087330	NonProperStrand	1	chr7	13846528	13846544	protein_coding	6330408A02Rik	utr3	ENSMUSG00000070814	NonProperStrand	5	1	-inf
chr7	16788535	16788556	protein_coding	Dhx34	exon	ENSMUSG00000006019	ProperStrand	11	chr4	131908231	131908287	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-7.4568
chr2	164650271	164650361	protein_coding	Zswim1	utr5	ENSMUSG00000017764	ProperStrand	68	chr4	86232400	86232490	snoRNA	ENSMUSG00000088958_Scarna8	.	ENSMUSG00000088958	ProperStrand	366	1	-9.4395
chr4	3090873	3090890	Simple_repeat	(CTGGGG)n	Simple_repeat	chr4(CTGGGG)n3090699	NonProperStrand	1	chr15	82007909	82007969	protein_coding	Srebf2	exon	ENSMUSG00000022463	ProperStrand	592	1	-inf
chr12	106899217	106899295	protein_coding	Atg2b	exon	ENSMUSG00000041341	ProperStrand	67	chr18	35716848	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-3.6049
chr5	144174175	144174226	protein_coding	Kdelr2	exon	ENSMUSG00000079111	ProperStrand	25	chr11	69483136	69483244	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.0393
chr10	127556696	127556769	protein_coding	Baz2a	exon	ENSMUSG00000040054	ProperStrand	274	chr16	3856861	3856878	protein_coding	Zfp174	utr3	ENSMUSG00000054939	NonProperStrand	166	2	-13.1089
chr11	77499723	77499766	protein_coding	Nufip2	utr5	ENSMUSG00000037857	ProperStrand	36	chr7	116664818	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.4622
chr17	45552614	45552639	protein_coding	Cdc5l	exon	ENSMUSG00000023932	ProperStrand	59	chr1	172993122	172993139	protein_coding	Fcgr3	intron	ENSMUSG00000059498	ProperStrand	44	1	-13.9736
chr5	77390254	77390423	protein_coding	Paics	exon	ENSMUSG00000029247	ProperStrand	78	chr19	5492702	5492758	protein_coding	Cfl1	exon	ENSMUSG00000056201	ProperStrand	88	2	-18.3320
chr10	40599918	40599934	protein_coding	Cdc40	intron	ENSMUSG00000038446	ProperStrand	34	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-10.0709
chr4	131399490	131399506	protein_coding	Mecr	exon	ENSMUSG00000028910	NonProperStrand	109	chr19	8799358	8799406	snoRNA	ENSMUSG00000065280_SNORD28	.	ENSMUSG00000065280	ProperStrand	269	1	-9.1086
chr5	140611938	140615254	protein_coding	Mad1l1	intron	ENSMUSG00000029554	ProperStrand	69	chr16	23110895	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-1.1561
chrX	130496426	130496668	protein_coding	Sytl4	exon	ENSMUSG00000031255	ProperStrand	169	chr17	25967605	25967626	protein_coding	Stub1	utr3	ENSMUSG00000039615	ProperStrand	24	1	-13.0907
chr11	94491189	94491205	protein_coding	Lrrc59	utr5	ENSMUSG00000020869	ProperStrand	115	chr7	116664812	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-2.8191
chr17	31664910	31665010	protein_coding	Ndufv3	exon	ENSMUSG00000024038	ProperStrand	9	chr17	35089183	35089233	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-9.3268
chr11	3649570	3649587	protein_coding	Osbp2	intron	ENSMUSG00000020435	ProperStrand	60	chr13	112219188	112219248	protein_coding	Gpbp1	intron	ENSMUSG00000032745	ProperStrand	85	1	-12.6136
chr1	72760136	72760174	protein_coding	Rpl37a	utr3	ENSMUSG00000046330	ProperStrand	94	chr1	162966190	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	2	-10.7833
chr2	121028411	121028428	protein_coding	Trp53bp1	exon	ENSMUSG00000043909	NonProperStrand	2	chr9	64024528	64024567	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	1	-15.8216
chr18	35399044	35399106	protein_coding	Ctnna1	exon	ENSMUSG00000037815	ProperStrand	115	chr16	38158114	38158204	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	1	-7.3525
chr19	46497171	46497187	protein_coding	Sufu	intron	ENSMUSG00000025231	ProperStrand	6	chr5	108334207	108334273	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-9.5107
chr17	33273890	33273906	protein_coding	Morc2b	exon	ENSMUSG00000048602	NonProperStrand	14	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-14.6536
chr17	24665417	24665483	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	chr12	44844128	44844156	snoRNA	ENSMUSG00000065004_SNORA33	.	ENSMUSG00000065004	ProperStrand	111	3	-9.2518
chr11	23186744	23186798	protein_coding	Xpo1	exon	ENSMUSG00000020290	ProperStrand	123	chr10	110918637	110918693	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-3.9166
chr18	24665508	24665619	protein_coding	Rprd1a	exon	ENSMUSG00000040446	ProperStrand	21	chr3	123210906	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-6.6806
chr8	91343853	91343870	DNA	Charlie10	MER1_type	chr8Charlie1091343828	ProperStrand	23	chr2	167836657	167836685	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	3	-19.5956
chr9	20467725	20467795	protein_coding	Pin1	utr3	ENSMUSG00000032171	ProperStrand	17	chr13	99585193	99585209	protein_coding	Fcho2	utr5	ENSMUSG00000041685	ProperStrand	10	1	-19.2790
chr7	36366045	36366062	protein_coding	Rgs9bp	utr3	ENSMUSG00000056043	ProperStrand	12	chr3	123210854	123210972	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	4	-16.2801
chr2	158182180	158182279	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	chr14	52829459	52829477	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-0.7671
chr9	20713716	20714223	protein_coding	Dnmt1	exon	ENSMUSG00000004099	ProperStrand	91	chr6	145564547	145564563	protein_coding	Tuba3b	utr5	ENSMUSG00000067338	ProperStrand	152	1	-10.6107
chr8	96535641	96535731	protein_coding	Amfr	intron	ENSMUSG00000031751	ProperStrand	26	chr15	80709667	80709751	protein_coding	Tnrc6b	exon	ENSMUSG00000047888	ProperStrand	59	4	-20.5595
chr4	43505907	43505931	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr7	119934402	119934484	protein_coding	Tead1	intron	ENSMUSG00000055320	ProperStrand	217	1	-1.0448
chr15	44960441	44960460	LINE	Lx7	L1	chr15Lx744959896	NonProperStrand	1	chr17	25296587	25296603	protein_coding	Clcn7	exon	ENSMUSG00000036636	ProperStrand	94	1	-inf
chr15	84101747	84103941	protein_coding	Parvb	exon	ENSMUSG00000022438	ProperStrand	127	chr11	57870840	57872087	protein_coding	Larp1	exon	ENSMUSG00000037331	ProperStrand	201	1	-9.3845
chr8	89409021	89409037	protein_coding	N4bp1	utr5	ENSMUSG00000031652	ProperStrand	98	chr9	113562325	113562341	protein_coding	Pdcd6ip	utr3	ENSMUSG00000032504	ProperStrand	53	1	-12.5775
chr18	32245997	32246016	protein_coding	Iws1	exon	ENSMUSG00000024384	ProperStrand	72	chr2	24719404	24733058	protein_coding	Ehmt1	exon	ENSMUSG00000036893	ProperStrand	45	4	-inf
chr6	85415939	85415969	protein_coding	Cct7	exon	ENSMUSG00000030007	ProperStrand	173	chr17	24857801	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-0.7812
chr11	69218804	69218871	protein_coding	Kdm6b	exon	ENSMUSG00000018476	ProperStrand	76	chr3	55987230	55987246	protein_coding	Nbea	utr5	ENSMUSG00000027799	NonProperStrand	115	2	-18.0042
chr11	29445932	29445971	protein_coding	Rps27a	exon	ENSMUSG00000020460	ProperStrand	47	chr5	121655104	121655128	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.2071
chr11	55296257	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	chr17	71990228	71990296	snoRNA	ENSMUSG00000092887_Snord53	.	ENSMUSG00000092887	ProperStrand	53	1	-6.4252
chr2	163912645	163912661	protein_coding	Stk4	intron	ENSMUSG00000018209	ProperStrand	20	chr4	116835209	116835239	protein_coding	Kif2c	exon	ENSMUSG00000028678	ProperStrand	32	1	-16.7842
chr8	73419657	73419757	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	chr16	43886793	43886850	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	7	-2.4060
chr14	45437701	45437719	LTR	MYSERV6-int	ERVK	chr14MYSERV6-int45437622	ProperStrand	1	chr10	23505169	23505240	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-inf
chr17	12884088	12884124	protein_coding	Igf2r	exon	ENSMUSG00000023830	ProperStrand	151	chr19	8963086	8963182	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-0.9237
chr13	107737212	107737228	protein_coding	Dimt1	utr5	ENSMUSG00000021692	ProperStrand	185	chr4	131865855	131865925	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-0.9090
chr7	133691178	133691297	protein_coding	Eif3c	exon	ENSMUSG00000030738	ProperStrand	92	chr10	23505152	23505235	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-0.7103
chr5	116059283	116059498	protein_coding	Gcn1l1	exon	ENSMUSG00000041638	ProperStrand	408	chr19	8799831	8799897	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	2	-2.9033
chr8	96697078	96697269	protein_coding	Mt2	exon	ENSMUSG00000031762	ProperStrand	71	chr18	35714196	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-3.1368
chr2	84530865	84531297	protein_coding	Zdhhc5	exon	ENSMUSG00000034075	NonProperStrand	144	chr5	121655101	121655127	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.2000
chr15	89387814	89387893	protein_coding	Shank3	intron	ENSMUSG00000022623	ProperStrand	19	chr7	16534823	16534839	protein_coding	Ehd2	utr3	ENSMUSG00000074364	NonProperStrand	197	1	-13.2630
chr11	32642553	32642610	protein_coding	Fbxw11	exon	ENSMUSG00000020271	ProperStrand	36	chr16	23110971	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.6986
chr9	108387876	108388457	protein_coding	Lamb2	exon	ENSMUSG00000052911	ProperStrand	35	chr3	123210881	123210981	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	6	-16.6060
chr8	3439719	3444892	protein_coding	Arhgef18	exon	ENSMUSG00000004568	ProperStrand	26	chr14	76247766	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-5.7966
chr2	121854581	121866915	protein_coding	Eif3j	exon	ENSMUSG00000027236	ProperStrand	15	chr2	155802215	155804880	protein_coding	Cep250	exon	ENSMUSG00000038241	ProperStrand	8	1	-19.9036
chr7	52382061	52382151	protein_coding-noncoding	Rpl13a	utr3	ENSMUSG00000074129	ProperStrand	106	chr18	73693112	73693138	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	2	-7.3642
chr18	73693111	73693137	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr18	75161130	75161172	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	2	-3.0762
chr17	13176332	13178803	protein_coding	Wtap	exon	ENSMUSG00000060475	ProperStrand	119	chr8	34802316	34802406	snoRNA	ENSMUSG00000088856_SNORA48	.	ENSMUSG00000088856	ProperStrand	236	1	-9.1941
chr11	119207004	119207020	protein_coding	Sgsh	utr3	ENSMUSG00000005043	ProperStrand	67	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-8.7055
chr14	31989872	31989972	protein_coding	Nisch	exon	ENSMUSG00000021910	ProperStrand	125	chr3	123210854	123210929	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-0.9995
chr14	52655379	52655395	protein_coding	Olfr221	exon	ENSMUSG00000044286	NonProperStrand	2	chr7	117190015	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-10.6222
chr17	79733667	79733708	protein_coding	Cdc42ep3	utr3	ENSMUSG00000036533	ProperStrand	9	chr4	131908236	131908335	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	5	-19.5882
chr7	13610255	13610355	protein_coding	Trim28	exon	ENSMUSG00000005566	ProperStrand	296	chr1	187066847	187066917	snoRNA	ENSMUSG00000077571_Snora36b	.	ENSMUSG00000077571	ProperStrand	244	1	-7.3148
chr17	25084535	25084558	protein_coding	Hn1l	intron	ENSMUSG00000024165	ProperStrand	45	chr4	148335372	148335469	protein_coding	Pex14	utr3	ENSMUSG00000028975	ProperStrand	16	1	-16.6088
chr4	86459681	86459715	protein_coding	Dennd4c	exon	ENSMUSG00000038024	ProperStrand	42	chr18	76297633	76297649	protein_coding	Zbtb7c	exon	ENSMUSG00000044646	ProperStrand	64	1	-13.9027
chr2	158184119	158184209	snoRNA	ENSMUSG00000064995_SNORA71	.	ENSMUSG00000064995	ProperStrand	430	chr5	74489594	74489676	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-0.7008
chr14	99701116	99701203	protein_coding	Klf5	exon	ENSMUSG00000005148	ProperStrand	39	chr7	117166722	117166812	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	2	-9.2534
chr19	44188367	44188406	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr15	102313674	102314652	protein_coding	Pcbp2	exon	ENSMUSG00000056851	ProperStrand	164	17	-19.6661
chr2	115500471	115500506	protein_coding	BC052040	exon	ENSMUSG00000040282	ProperStrand	20	chr8	73419657	73419715	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-12.3818
chr5	151755614	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr18	63109676	63109692	protein_coding	Apcdd1	exon	ENSMUSG00000071847	NonProperStrand	254	2	-8.0854
chr11	6302809	6302840	protein_coding	Zmiz2	exon	ENSMUSG00000041164	ProperStrand	69	chr11	106874217	106874252	tRNA	tRNA945-ArgCCG	.	1111002	ProperStrand	133	1	-11.4341
chr8	83085661	83085741	LINE	L1_Mur3	L1	chr8L1_Mur383085266	ProperStrand	1	chr8	83085883	83085973	LTR	RLTR9A2	ERVK	chr8RLTR9A283085790	ProperStrand	1	1	-inf
chr16	11088337	11088395	protein_coding	Txndc11	exon	ENSMUSG00000022498	ProperStrand	11	chr12	88778631	88778723	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-9.9385
chr17	34089438	34089516	protein_coding	Rps18	exon	ENSMUSG00000008668	ProperStrand	111	chr16	23110489	23110579	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.4833
chr4	21606097	21606114	protein_coding	Prdm13	exon	ENSMUSG00000040478	ProperStrand	51	chr3	157729109	157729125	protein_coding	Lrrc40	exon	ENSMUSG00000063052	NonProperStrand	26	1	-15.3339
chr18	63157767	63157783	protein_coding	Napg	utr3	ENSMUSG00000024581	ProperStrand	17	chr9	120037964	120038054	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-7.2046
chr13	35006314	35006447	protein_coding	1700026J04Rik	exon	ENSMUSG00000021414	NonProperStrand	1	chr15	55012907	55012962	protein_coding	Deptor	intron	ENSMUSG00000022419	ProperStrand	17	1	-inf
chr4	141029997	141030081	protein_coding	Spen	exon	ENSMUSG00000040761	ProperStrand	161	chr18	73693162	73693182	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-3.6420
chr11	97914542	97914573	protein_coding	Stac2	utr5	ENSMUSG00000017400	NonProperStrand	4	chr15	34370545	34370639	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	NonProperStrand	21	1	-19.5361
chr9	61260675	61260741	protein_coding	Tle3	exon	ENSMUSG00000032280	ProperStrand	88	chr2	26768688	26768736	protein_coding	Rpl7a	exon	ENSMUSG00000062647	ProperStrand	234	2	-15.5002
chr7	151765212	151765228	antisense	Gm10574	.	ENSMUSG00000073778	ProperStrand	357	chr17	24665466	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-1.7590
chr6	30329144	30329171	rRNA	n-R5s161	.	ENSMUSG00000065662	ProperStrand	7	chr11	97642961	97643006	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-10.9359
chr8	86096587	86096764	protein_coding	Tecr	exon	ENSMUSG00000031708	ProperStrand	100	chr19	8798741	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-3.8318
chr12	88488443	88496424	protein_coding	Pomt2	exon	ENSMUSG00000034126	NonProperStrand	331	chr1	63225588	63225611	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-3.3921
chr11	51415253	51415343	protein_coding	Hnrnpab	exon	ENSMUSG00000020358	ProperStrand	124	chr4	131865381	131865461	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-2.6844
chr11	5867007	5867044	protein_coding	Ykt6	utr3	ENSMUSG00000002741	ProperStrand	46	chr8	125626932	125626983	snoRNA	ENSMUSG00000064450_Snord68	.	ENSMUSG00000064450	ProperStrand	181	1	-11.6344
chr2	32818804	32818951	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	chr3	123210854	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	33	-0.9873
chr8	74844036	74844126	protein_coding	Klf2	exon	ENSMUSG00000055148	ProperStrand	82	chr9	15119676	15119766	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.1035
chr7	88169871	88169888	protein_coding	Zfp592	exon	ENSMUSG00000005621	NonProperStrand	32	chr11	106362618	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-8.6656
chrX	83547356	83547372	protein_coding	Mageb4	intron	ENSMUSG00000035427	NonProperStrand	191	chr1	136729069	136729087	protein_coding	Ppp1r12b	intron	ENSMUSG00000073557	NonProperStrand	12	1	-14.2740
chr13	96372987	96373034	protein_coding	F2r	utr3	ENSMUSG00000048376	ProperStrand	9	chr16	23111770	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.4225
chr4	43505757	43505847	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr15	8104943	8104972	protein_coding	Nup155	exon	ENSMUSG00000022142	ProperStrand	91	1	-2.3455
chr17	34174144	34174180	protein_coding	Rxrb	exon	ENSMUSG00000039656	ProperStrand	34	chr5	121655016	121655098	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	3	-11.5010
chr12	74452873	74453075	protein_coding	Slc38a6	exon	ENSMUSG00000044712	ProperStrand	4	chr15	98350146	98350283	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-10.3620
chr18	57400307	57400324	protein_coding	Megf10	exon	ENSMUSG00000024593	ProperStrand	143	chr18	73693171	73693189	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-3.8617
chr4	131908686	131908710	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr17	29398763	29400819	protein_coding	Ppil1	exon	ENSMUSG00000024007	ProperStrand	17	1	-9.8072
chr14	20627270	20629206	protein_coding	Nid2	exon	ENSMUSG00000021806	ProperStrand	372	chr5	148332850	148332869	protein_coding	Pan3	intron	ENSMUSG00000029647	ProperStrand	57	2	-15.4014
chr19	24172802	24173987	protein_coding	Tjp2	exon	ENSMUSG00000024812	ProperStrand	63	chr5	112865459	112865475	protein_coding	Sez6l	exon	ENSMUSG00000058153	ProperStrand	81	1	-12.6136
chr2	25105521	25107254	protein_coding	Ndor1	exon	ENSMUSG00000006471	NonProperStrand	84	chr5	145532359	145532393	protein_coding	Trrap	intron	ENSMUSG00000045482	ProperStrand	399	1	-8.8441
chr18	32062127	32062321	protein_coding	Wdr33	exon	ENSMUSG00000024400	ProperStrand	48	chr1	89681370	89681396	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-5.8786
chr19	4306134	4306153	protein_coding	Adrbk1	utr5	ENSMUSG00000024858	ProperStrand	37	chr1	162965531	162965562	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.1770
chr9	103401280	103401296	protein_coding	Tmem108	exon	ENSMUSG00000042757	NonProperStrand	323	chr17	35089239	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-2.3745
chr9	21823257	21823273	protein_coding	Elavl3	exon	ENSMUSG00000003410	NonProperStrand	137	chr7	116663433	116663503	protein_coding	Rpl27a	exon	ENSMUSG00000046364	ProperStrand	149	1	-9.8310
chr6	89268664	89268726	protein_coding	Plxna1	utr3	ENSMUSG00000030084	ProperStrand	233	chr9	54060294	54060311	protein_coding	Cyp19a1	intron	ENSMUSG00000032274	NonProperStrand	2	2	-inf
chr5	130487358	130487376	protein_coding	Asl	utr3	ENSMUSG00000025533	NonProperStrand	4	chr7	150717298	150717425	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-11.1357
chr15	81110991	81111009	SINE	ID4	ID	chr15ID481110956	ProperStrand	272	chr11	120648138	120648369	protein_coding	Gps1	exon	ENSMUSG00000025156	ProperStrand	22	1	-12.3158
chr11	3032739	3033329	protein_coding-noncoding	Sfi1	utr3	ENSMUSG00000023764	ProperStrand	3	chr11	3032900	3033078	protein_coding	Sfi1	utr3	ENSMUSG00000023764	ProperStrand	17	2	-inf
chr15	81645482	81645597	protein_coding	Tef	exon	ENSMUSG00000022389	ProperStrand	12	chr5	75473198	75473215	protein_coding	Gsx2	utr3	ENSMUSG00000035946	ProperStrand	307	1	-13.3260
chr17	33954875	33954935	protein_coding	Kank3	exon	ENSMUSG00000042099	ProperStrand	64	chr16	23111777	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.8017
chr5	115940316	115940406	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	chr10	90581034	90581130	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	2	-1.9058
chr11	115916196	115916270	protein_coding	Unk	exon	ENSMUSG00000020770	ProperStrand	21	chr4	3762227	3762252	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	4	-19.2430
chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	chr9	108464180	108464520	protein_coding	Impdh2	exon	ENSMUSG00000062867	ProperStrand	74	1	-9.0244
chr8	125099334	125099393	protein_coding	Aprt	exon	ENSMUSG00000006589	ProperStrand	20	chr11	97641445	97641536	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	1	-10.0758
chr13	68759738	68764669	protein_coding	Adcy2	exon	ENSMUSG00000021536	ProperStrand	237	chr4	118809028	118809106	protein_coding	Slc2a1	utr3	ENSMUSG00000028645	ProperStrand	361	1	-6.9800
chr3	88787051	88787067	protein_coding	Ash1l	exon	ENSMUSG00000028053	NonProperStrand	50	chr11	120207380	120207511	protein_coding	Actg1	utr3	ENSMUSG00000062825	ProperStrand	178	1	-11.4985
chr2	90235292	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	58283229	58283246	antisense	Gm16277	.	ENSMUSG00000087002	NonProperStrand	2	1	-11.8388
chr16	94651024	94651118	protein_coding	Ttc3	exon	ENSMUSG00000040785	ProperStrand	47	chr7	116664793	116664849	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.9773
chr11	69266814	69266830	protein_coding	Dnahc2	exon	ENSMUSG00000005237	ProperStrand	95	chr15	76005537	76005553	protein_coding	Plec	exon	ENSMUSG00000022565	ProperStrand	186	1	-10.1207
chr6	39610933	39612007	protein_coding	Braf	exon	ENSMUSG00000002413	ProperStrand	7	chr4	131908689	131908739	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.0493
chr17	28466286	28466326	protein_coding-noncoding	Rpl10a	utr5	ENSMUSG00000037805	ProperStrand	14	chr9	64022854	64022922	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	5	-20.0290
chrX	10296480	10296497	protein_coding	Mid1ip1	utr3	ENSMUSG00000008035	ProperStrand	27	chr7	150717298	150717383	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	3	-16.1232
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr8	73419683	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	5	-2.4866
chr17	57162744	57162805	protein_coding	Khsrp	exon	ENSMUSG00000007670	ProperStrand	353	chr5	130300500	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	4	-1.9086
chr2	152771639	152771657	protein_coding	Dusp15	intron	ENSMUSG00000042662	ProperStrand	17	chr16	23110892	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.8783
chr10	23770362	23770378	protein_coding	Taar7f	exon	ENSMUSG00000060825	NonProperStrand	40	chr16	23110828	23110860	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.7072
chr19	38791592	38791609	protein_coding	Plce1	exon	ENSMUSG00000024998	NonProperStrand	11	chr10	80640932	80641444	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-9.5329
chr17	28467579	28467790	protein_coding	Rpl10a	exon	ENSMUSG00000037805	ProperStrand	121	chr19	8963108	8963198	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.2065
chr16	22382875	22436536	protein_coding	Etv5	utr3	ENSMUSG00000013089	ProperStrand	88	chr4	131908251	131908449	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-1.8312
chr10	80641699	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	chr9	120037898	120037991	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	2	-0.7606
chr8	75071970	75071987	protein_coding	Med26	utr5	ENSMUSG00000045248	ProperStrand	45	chr8	32260408	32260428	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	2	-8.5384
chr8	3537362	3537466	protein_coding	Pnpla6	exon	ENSMUSG00000004565	ProperStrand	60	chr12	112779177	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	6	-19.2214
chr4	137109642	137109660	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	chr6	85537833	85537877	protein_coding	Alms1	exon	ENSMUSG00000063810	ProperStrand	37	1	-9.0755
chr16	91227718	91227735	protein_coding	Olig2	utr3	ENSMUSG00000039830	NonProperStrand	78	chr19	8799581	8799645	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	3	-14.3096
chr18	51673663	51673752	LTR	MTC	MaLR	chr18MTC51673362	NonProperStrand	1	chr18	51673931	51674021	LTR	RLTR15	ERVK	chr18RLTR1551673943	ProperStrand	1	1	-inf
chr12	33523318	33524052	protein_coding	Nampt	exon	ENSMUSG00000020572	ProperStrand	15	chr16	23110980	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.0842
chr15	76013843	76013996	protein_coding	Plec	exon	ENSMUSG00000022565	ProperStrand	186	chr1	134889783	134889848	protein_coding	Mdm4	intron	ENSMUSG00000054387	ProperStrand	95	4	-24.2457
chr4	131865498	131865520	lincRNA	Snhg12	intron	ENSMUSG00000086290	ProperStrand	178	chr9	15118322	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-3.0083
chr19	12040358	12040397	protein_coding	Osbp	utr5	ENSMUSG00000024687	ProperStrand	19	chr8	126620109	126620129	protein_coding	Gm20388	intron	ENSMUSG00000092329	ProperStrand	295	1	-12.4541
chr9	85584230	85584247	protein_coding	Ibtk	intron	ENSMUSG00000035941	ProperStrand	14	chr7	29136525	29136575	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.0758
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chrX	34622906	34622990	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	4	-4.3682
chr10	43232844	43232870	protein_coding	Bend3	utr3	ENSMUSG00000038214	ProperStrand	27	chr18	74938044	74938089	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	ProperStrand	1022	1	-9.2548
chr7	108971290	108971306	protein_coding	Inppl1	utr3	ENSMUSG00000032737	ProperStrand	272	chr2	160792206	160792225	protein_coding	Chd6	exon	ENSMUSG00000057133	ProperStrand	104	1	-9.1805
chr19	27837820	27837836	protein_coding	Rfx3	utr3	ENSMUSG00000040929	ProperStrand	92	chr5	121655032	121655096	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.9688
chr3	141973129	141973161	protein_coding	Pdlim5	intron	ENSMUSG00000028273	ProperStrand	17	chr5	130300420	130300510	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.8548
chr18	12927133	12929860	protein_coding	Osbpl1a	exon	ENSMUSG00000044252	ProperStrand	39	chr11	6428077	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-9.7660
chr8	108049248	108049338	protein_coding	Atp6v0d1	exon	ENSMUSG00000013160	ProperStrand	35	chr4	131908361	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.2627
chr7	109149271	109149287	protein_coding	Numa1	exon	ENSMUSG00000066306	NonProperStrand	171	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.4613
chr5	109012103	109012156	protein_coding	Gak	exon	ENSMUSG00000062234	ProperStrand	33	chr10	23505189	23505279	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.1417
chr11	97607301	97607317	protein_coding	Cwc25	utr3	ENSMUSG00000018541	NonProperStrand	1	chr4	131865855	131865922	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr10	67589468	67591575	protein_coding	Arid5b	exon	ENSMUSG00000019947	ProperStrand	43	chr11	69481332	69481421	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.8146
chr9	43950112	43950162	protein_coding	Mcam	utr3	ENSMUSG00000032135	ProperStrand	27	chr5	121828827	121828843	protein_coding	Trafd1	exon	ENSMUSG00000042726	ProperStrand	81	1	-14.3305
chr2	164311966	164311983	protein_coding	Dbndd2	utr5	ENSMUSG00000017734	ProperStrand	53	chr17	71990941	71990999	snoRNA	ENSMUSG00000092713_CT010429.1	.	ENSMUSG00000092713	ProperStrand	182	1	-11.3369
chr13	76193665	76193681	protein_coding	Gpr150	exon	ENSMUSG00000045509	NonProperStrand	63	chr4	131865868	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.6928
chr9	15118322	15118378	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	chr1	162967139	162967178	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	3	-1.1865
chr15	97575701	97575719	protein_coding	Rapgef3	utr3	ENSMUSG00000022469	NonProperStrand	3	chr4	131865394	131865493	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-10.2531
chr5	37204514	37204532	protein_coding	Man2b2	exon	ENSMUSG00000029119	ProperStrand	33	chr18	33954887	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-4.6356
chr7	26472435	26472451	protein_coding	Tgfb1	utr5	ENSMUSG00000002603	NonProperStrand	154	chr1	182824882	182824931	protein_coding	Lefty2	exon	ENSMUSG00000066652	ProperStrand	48	1	-11.8714
chr19	29176243	29176273	protein_coding	Rcl1	intron	ENSMUSG00000024785	NonProperStrand	4	chr17	24857764	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	NonProperStrand	27	1	-21.1740
chr2	166888989	166889037	snoRNA	ENSMUSG00000077515_SNORD12	.	ENSMUSG00000077515	ProperStrand	191	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-3.0294
chr6	122680071	122680095	protein_coding	Slc2a3	exon	ENSMUSG00000003153	ProperStrand	682	chr19	43579103	43579291	protein_coding	Got1	exon	ENSMUSG00000025190	ProperStrand	32	1	-9.7167
chr1	188528544	188528560	protein_coding	Tgfb2	exon	ENSMUSG00000039239	ProperStrand	6	chr5	72931848	72932117	protein_coding	Nfxl1	exon	ENSMUSG00000072889	ProperStrand	17	1	-19.9795
chr7	4964298	4964335	protein_coding	Fiz1	exon	ENSMUSG00000061374	ProperStrand	37	chr10	39978408	39978483	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	3	-14.6929
chr13	13581353	13603363	protein_coding	Nid1	exon	ENSMUSG00000005397	ProperStrand	112	chr5	130300420	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-4.4083
chr11	116077990	116078170	polymorphic_pseudogene	Cdk3-ps	.	ENSMUSG00000092300	ProperStrand	2	chr8	98269959	98270035	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-12.9619
chr4	106104223	106104276	protein_coding	Usp24	exon	ENSMUSG00000028514	ProperStrand	74	chr1	162966203	162966256	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	2	-11.5021
chr1	169286803	169286844	protein_coding	Aldh9a1	exon	ENSMUSG00000026687	ProperStrand	58	chr10	23505187	23505277	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-2.4578
chrX	147087417	147087671	protein_coding	Tro	exon	ENSMUSG00000025272	ProperStrand	13	chr4	131866178	131866268	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-6.6596
chr9	41804331	41808344	protein_coding	Sorl1	exon	ENSMUSG00000049313	ProperStrand	112	chr4	131865856	131865936	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.8146
chr11	106110828	106110868	protein_coding	Ftsj3	exon	ENSMUSG00000020706	ProperStrand	64	chr1	162967490	162967541	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	3	-8.4135
mmu-miR-6937-5p	2	19	miRNA	mmu-miR-6937-5p	.	mmu-miR-6937-5p	ProperStrand	1	chr4	46508040	46508117	snoRNA	ENSMUSG00000064410_SNORA36	.	ENSMUSG00000064410	ProperStrand	133	1	-inf
chr4	120234112	120235465	protein_coding	Ctps	exon	ENSMUSG00000028633	ProperStrand	19	chr16	23110913	23110993	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-3.1937
chr7	116663438	116665162	protein_coding	Rpl27a	exon	ENSMUSG00000046364	ProperStrand	149	chr16	23110902	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	10	-3.1208
chr9	61761257	61761296	protein_coding	Rplp1	exon	ENSMUSG00000007892	ProperStrand	116	chr4	97812275	97812291	protein_coding	Nfia	intron	ENSMUSG00000028565	NonProperStrand	74	1	-11.5678
chr2	179928555	179928713	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr12	110918191	110918221	snoRNA	ENSMUSG00000065749_AF357428	.	ENSMUSG00000065749	ProperStrand	218	2	-11.4381
chr4	43505818	43505898	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr8	74151494	74151584	protein_coding	Unc13a	utr3	ENSMUSG00000034799	ProperStrand	13	1	-6.0161
chr10	107800720	107800810	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	chr14	33005038	33005093	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	3	-1.1434
chr6	52589227	52589315	snoRNA	ENSMUSG00000064792_SNORA32	.	ENSMUSG00000064792	ProperStrand	151	chr7	116663635	116663725	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.0996
chr2	109854075	109854165	protein_coding	Lgr4	utr3	ENSMUSG00000050199	ProperStrand	27	chr16	23110477	23110557	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.9061
chr5	111126328	111126378	protein_coding	Ep400	exon	ENSMUSG00000029505	ProperStrand	176	chr9	122075466	122075482	protein_coding	Snrk	exon	ENSMUSG00000038145	NonProperStrand	97	1	-10.1894
chr5	110754162	110754188	protein_coding	Pole	exon	ENSMUSG00000007080	ProperStrand	125	chr7	148634759	148634835	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	3	-6.9107
chr5	77738902	77738918	protein_coding	Noa1	exon	ENSMUSG00000036285	ProperStrand	147	chr5	108334195	108334241	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-3.1446
chr17	24857637	24857737	protein_coding-noncoding	Rps2	utr5	ENSMUSG00000044533	ProperStrand	29	chr7	52382755	52382828	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-8.2073
chr5	74489265	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr17	35294969	35294996	protein_coding	Prrc2a	exon	ENSMUSG00000024393	ProperStrand	315	1	-2.5360
chr7	75775558	75775638	LINE	L1Md_F2	L1	chr7L1Md_F275775111	NonProperStrand	1	chr6	130153299	130153389	protein_coding	Klra9	intron	ENSMUSG00000033024	NonProperStrand	5	1	-inf
chr6	129533251	129534178	protein_coding	Klre1	exon	ENSMUSG00000050241	NonProperStrand	20	chr10	110918547	110918633	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-5.5586
chr16	4886395	4886411	protein_coding	Mgrn1	exon	ENSMUSG00000022517	NonProperStrand	157	chr16	38369597	38369614	protein_coding	Popdc2	exon	ENSMUSG00000022803	ProperStrand	19	1	-13.7192
chr7	35013997	35014373	protein_coding	Gpi1	exon	ENSMUSG00000036427	ProperStrand	288	chr8	5639956	5640046	protein_coding	Gm1840	exon	ENSMUSG00000043192	ProperStrand	2	1	-17.7684
chr4	106061147	106061164	protein_coding	Usp24	exon	ENSMUSG00000028514	ProperStrand	74	chr17	24857805	24857856	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.9536
chr3	133150443	133150533	protein_coding	Tet2	exon	ENSMUSG00000040943	ProperStrand	192	chr7	116664811	116664891	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	4	-4.0703
chrX	97701279	97701309	protein_coding	Igbp1	exon	ENSMUSG00000031221	ProperStrand	33	chr18	35716791	35716834	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.2115
chr5	128076288	128076304	protein_coding	Slc15a4	utr3	ENSMUSG00000029416	ProperStrand	49	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.0906
chr5	66651465	66651481	protein_coding	Nsun7	utr5	ENSMUSG00000029206	NonProperStrand	73	chr3	123210874	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.7553
chr17	24857717	24857820	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	chr4	132394348	132394438	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	9	-4.3628
chr7	139833256	139834171	protein_coding	Lhpp	exon	ENSMUSG00000030946	ProperStrand	35	chr5	112865459	112865475	protein_coding	Sez6l	exon	ENSMUSG00000058153	ProperStrand	81	1	-13.8015
chr17	23955820	23955839	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-3.6055
chr11	68864411	68864454	protein_coding	Aurkb	exon	ENSMUSG00000020897	ProperStrand	11	chr5	93013441	93013458	protein_coding	Fam47e	intron	ENSMUSG00000057068	NonProperStrand	2	1	-inf
chr17	6440374	6440390	protein_coding	Tmem181b-ps	utr3	ENSMUSG00000079733	ProperStrand	9	chr4	131908689	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-19.0595
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr14	68296071	68298285	protein_coding	Cdca2	exon	ENSMUSG00000048922	ProperStrand	50	1	-6.7304
chr11	63732007	63732107	protein_coding	Hs3st3b1	intron	ENSMUSG00000070407	ProperStrand	10	chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-11.5171
chr5	74489214	74489233	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr3	101385986	101386072	protein_coding	Atp1a1	exon	ENSMUSG00000033161	ProperStrand	316	2	-4.4415
chr9	3454549	3454567	protein_coding	Cwf19l2	exon	ENSMUSG00000025898	ProperStrand	21	chr4	131908689	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-5.1004
chr2	29555277	29555350	protein_coding	Rapgef1	exon	ENSMUSG00000039844	ProperStrand	58	chr7	117189957	117190047	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.3943
chr14	15572351	15572371	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr5	130300434	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-0.9856
chr1	163765205	163765305	protein_coding	AI848100	exon	ENSMUSG00000040297	ProperStrand	12	chr4	131908689	131908739	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.9639
chr2	153050783	153050799	protein_coding	Tspyl3	exon	ENSMUSG00000074671	ProperStrand	228	chr10	39978308	39978371	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-2.9527
chr2	26966112	26966128	protein_coding	Fam163b	utr3	ENSMUSG00000009216	NonProperStrand	2	chr4	131908236	131908319	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-8.3123
chr8	96829273	96829966	protein_coding	Nup93	exon	ENSMUSG00000032939	ProperStrand	43	chr7	52382753	52382802	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-7.4156
chr5	145532201	145532393	protein_coding	Trrap	intron	ENSMUSG00000045482	ProperStrand	399	chr11	6428035	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	8	-7.9527
chr9	120864340	120864484	protein_coding	Ctnnb1	exon	ENSMUSG00000006932	ProperStrand	214	chr17	24856620	24856682	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-3.9706
chr10	80992362	80992379	protein_coding	Gna11	utr3	ENSMUSG00000034781	ProperStrand	23	chr4	131908688	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-7.2528
chr19	10268219	10268495	protein_coding	Fads1	exon	ENSMUSG00000010663	ProperStrand	21	chr3	123210854	123210926	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.9390
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr7	52381719	52381799	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-2.3043
chr11	118351261	118351277	protein_coding	Rbfox3	utr3	ENSMUSG00000025576	NonProperStrand	16	chr4	122968617	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	2	-14.2587
chr7	26076126	26076171	protein_coding	Cic	exon	ENSMUSG00000005442	ProperStrand	80	chr7	29136627	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-3.4491
chr2	121897923	121897975	protein_coding	Spg11	exon	ENSMUSG00000033396	ProperStrand	32	chr15	79908963	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	2	-10.8608
chr9	15130703	15131007	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	chr16	23111374	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	8	-0.8433
chr7	116663634	116663728	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	chr2	166888978	166889056	snoRNA	ENSMUSG00000077515_SNORD12	.	ENSMUSG00000077515	ProperStrand	191	5	-5.4531
chr19	4759706	4759795	protein_coding	Rbm4b	intron	ENSMUSG00000033760	NonProperStrand	7	chr16	23111770	23111803	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-14.3771
chrX	101176432	101176532	protein_coding	Rlim	utr5	ENSMUSG00000056537	ProperStrand	38	chr11	69481433	69481473	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-4.0476
chr17	4082195	4082285	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr2	97567255	97567345	LINE	L1Md_A	L1	chr2L1Md_A97567194	ProperStrand	1	1	-inf
chrX	93359200	93360744	protein_coding	Msn	exon	ENSMUSG00000031207	ProperStrand	71	chr18	74938198	74938288	snoRNA	ENSMUSG00000089235_SCARNA17	.	ENSMUSG00000089235	ProperStrand	1128	1	-7.1179
chr13	9833559	9833654	LINE	L1Md_T	L1	chr13L1Md_T9831266	NonProperStrand	15	chr8	129468812	129468837	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	NonProperStrand	22	1	-18.3168
chr16	4482299	4482340	protein_coding	Srl	utr3	ENSMUSG00000022519	ProperStrand	8	chr16	23111703	23111793	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.6662
chr2	155965533	155967862	protein_coding	Nfs1	exon	ENSMUSG00000027618	ProperStrand	5	chr11	6428089	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-13.4048
chr2	179773505	179773524	protein_coding	Psma7	exon	ENSMUSG00000027566	NonProperStrand	4	chrX	9789948	9789969	protein_coding	Rpgr	intron	ENSMUSG00000031174	NonProperStrand	2	1	-inf
chr6	125112691	125112925	protein_coding	Gapdh	exon	ENSMUSG00000057666	ProperStrand	356	chr18	73693166	73693190	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-2.2458
chr18	67476010	67476038	protein_coding	Impa2	intron	ENSMUSG00000024525	ProperStrand	31	chr4	130305569	130305620	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	2	-17.4497
chr10	98464018	98464118	protein_coding	Atp2b1	exon	ENSMUSG00000019943	ProperStrand	31	chr17	24859368	24859429	protein_coding	Ndufb10	exon	ENSMUSG00000040048	ProperStrand	6	1	-18.6658
chr9	28898250	28898323	protein_coding	Ntm	intron	ENSMUSG00000059974	NonProperStrand	27	chr4	131908300	131908355	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-7.1402
chr2	63936035	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr16	18240846	18240936	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	6	-18.5069
chr4	14830374	14830474	protein_coding	Tmem55a	intron	ENSMUSG00000028221	ProperStrand	28	chr16	23110909	23110989	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-5.2588
chr8	87370678	87370729	protein_coding	Calr	utr5	ENSMUSG00000003814	ProperStrand	232	chr6	52165758	52165774	protein_coding	Hoxa7	exon	ENSMUSG00000038236	ProperStrand	28	1	-12.1421
chr8	23763839	23763856	protein_coding	Polb	utr5	ENSMUSG00000031536	ProperStrand	23	chr10	80642707	80642772	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-8.0160
chr7	116663649	116663739	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	chr11	69482351	69482400	snoRNA	ENSMUSG00000089542_snoU6-77	.	ENSMUSG00000089542	ProperStrand	138	1	-1.2188
chr13	46862888	46862988	snoRNA	ENSMUSG00000064558_SNORA55	.	ENSMUSG00000064558	ProperStrand	187	chr19	8798740	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	6	-15.0589
chr12	5091256	5091274	protein_coding	Klhl29	exon	ENSMUSG00000020627	ProperStrand	9	chr13	62944660	62944677	protein_coding	Fbp2	intron	ENSMUSG00000021456	ProperStrand	100	1	-16.2001
chr9	54613868	54613887	protein_coding	Crabp1	intron	ENSMUSG00000032291	ProperStrand	8	chr17	35299566	35299590	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-8.8452
chr8	96590141	96590231	protein_coding	Ogfod1	utr3	ENSMUSG00000033009	ProperStrand	18	chr3	68889046	68889126	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-5.5631
chr10	126611936	126612109	protein_coding	Slc26a10	utr3	ENSMUSG00000040441	ProperStrand	5	chr16	23111374	23111454	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-5.8178
chr9	40611956	40613242	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr11	97642952	97643072	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	8	-1.6167
chr12	94536400	94536490	LINE	L1Md_T	L1	chr12L1Md_T94535415	ProperStrand	1	chr7	110699256	110699346	protein_coding	Olfr613	utr5	ENSMUSG00000078624	NonProperStrand	13	1	-inf
chr19	36956170	36960144	protein_coding	Tnks2	intron	ENSMUSG00000024811	ProperStrand	133	chr11	97642952	97643078	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-2.3755
chr12	68767303	68767374	LTR	MTA_Mm	MaLR	chr12MTA_Mm68767132	NonProperStrand	3	chr8	87194607	87194661	protein_coding	Nacc1	utr3	ENSMUSG00000001910	ProperStrand	130	1	-18.1333
chr6	115757992	115758101	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr3	95980283	95980322	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	2	-0.8289
chr6	93765818	93862891	protein_coding	Magi1	intron	ENSMUSG00000045095	NonProperStrand	47	chr9	15119967	15120018	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-7.7407
chr12	75102613	75102632	protein_coding	Syt16	intron	ENSMUSG00000044912	NonProperStrand	6	chr2	29668419	29668496	protein_coding	Slc27a4	intron	ENSMUSG00000059316	ProperStrand	24	1	-18.6952
chr11	68849886	68849922	protein_coding	1500010J02Rik	utr3	ENSMUSG00000020898	ProperStrand	38	chr2	26494708	26494807	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.9500
chr17	47834225	47834288	protein_coding	Frs3	utr5	ENSMUSG00000023266	ProperStrand	11	chr11	77996569	77996605	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	4	-19.7799
chr2	148697538	148697580	protein_coding	Cst3	utr3	ENSMUSG00000027447	ProperStrand	13	chr16	23111372	23111445	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-6.6036
chr13	81962989	81963008	SINE	B1F2	Alu	chr13B1F281962960	ProperStrand	15	chr16	23110911	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-3.8284
chr7	30026273	30026289	protein_coding	Yif1b	intron	ENSMUSG00000030588	ProperStrand	154	chr5	108334194	108334241	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-3.0614
chr19	11015616	11015632	protein_coding	Gpr44	exon	ENSMUSG00000034117	NonProperStrand	118	chr8	73419657	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-1.9744
chr8	113447141	113447170	protein_coding	St3gal2	intron	ENSMUSG00000031749	ProperStrand	206	chr6	115757992	115758092	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-3.1449
chr2	27954905	27954923	lincRNA	F730016J06Rik	intron	ENSMUSG00000086425	NonProperStrand	21	mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	1	-8.0023
chr19	23332023	23332040	protein_coding	Smc5	exon	ENSMUSG00000024943	ProperStrand	146	chr4	154533898	154533950	protein_coding	Ski	exon	ENSMUSG00000029050	ProperStrand	28	1	-13.0705
chr2	26766835	26766854	snoRNA	ENSMUSG00000065258_SNORD24	.	ENSMUSG00000065258	ProperStrand	130	chr1	162966813	162966852	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-4.7525
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr3	126547274	126547291	protein_coding	Camk2d	utr3	ENSMUSG00000053819	NonProperStrand	20	1	-11.1509
chr9	3537512	3537592	protein_coding	Gucy1a2	intron	ENSMUSG00000041624	NonProperStrand	3	chr14	118100620	118100710	protein_coding	Gpc6	intron	ENSMUSG00000058571	NonProperStrand	31	1	-inf
chr18	9879099	9879189	LTR	RLTR9C	ERVK	chr18RLTR9C9878897	ProperStrand	1	chr18	9961523	9961603	protein_coding	Thoc1	intron	ENSMUSG00000024287	NonProperStrand	5	1	-inf
chr4	59771075	59771175	protein_coding	E130308A19Rik	utr3	ENSMUSG00000045071	ProperStrand	41	chr2	26493362	26493411	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-4.4627
chr8	109603589	109603679	protein_coding-noncoding	Terf2	utr3	ENSMUSG00000031921	ProperStrand	1	chr8	109603848	109603928	protein_coding	Terf2	intron	ENSMUSG00000031921	ProperStrand	34	1	-inf
chr17	56423631	56423721	protein_coding	Plin3	exon	ENSMUSG00000024197	ProperStrand	23	chr8	129468783	129468863	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-6.2916
chr5	109124122	109132306	protein_coding	Fgfrl1	exon	ENSMUSG00000008090	ProperStrand	111	chr2	162905434	162906462	protein_coding	Mybl2	exon	ENSMUSG00000017861	ProperStrand	230	1	-9.3847
chr17	31640574	31640590	protein_coding	Wdr4	exon	ENSMUSG00000024037	NonProperStrand	18	chr7	148634704	148634836	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-6.3384
chr11	119994105	119996099	protein_coding	Slc38a10	exon	ENSMUSG00000061306	ProperStrand	91	chr19	8963027	8963052	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.6128
chr11	68716763	68717908	protein_coding	Rpl26	exon	ENSMUSG00000060938	ProperStrand	130	chr19	8800458	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-2.1742
chr8	118230284	118230303	protein_coding	Maf	exon	ENSMUSG00000055435	ProperStrand	4	chr7	116663634	116663767	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-7.9103
chr8	13885747	13885804	protein_coding	2410022L05Rik	exon	ENSMUSG00000031458	ProperStrand	3	chr18	73693166	73693183	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-11.8459
chr7	118214718	118214818	protein_coding	Eif4g2	utr3	ENSMUSG00000005610	ProperStrand	134	chr8	46123614	46123645	protein_coding	Fat1	exon	ENSMUSG00000070047	ProperStrand	306	1	-8.4397
chr5	121061523	121061590	protein_coding	1110008J03Rik	exon	ENSMUSG00000029600	ProperStrand	2	chr11	68886949	68887039	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-11.5005
chr3	34549359	34549449	protein_coding	Sox2	exon	ENSMUSG00000074637	ProperStrand	299	chr4	131865420	131865500	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-1.2949
chr14	71062292	71062315	protein_coding	Xpo7	utr3	ENSMUSG00000022100	ProperStrand	109	chr1	107605031	107605076	protein_coding	2310035C23Rik	intron	ENSMUSG00000026319	ProperStrand	14	2	-23.1715
chr1	181027187	181027205	protein_coding	Smyd3	intron	ENSMUSG00000055067	ProperStrand	231	chr1	162967516	162967566	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-1.2573
chr4	124408655	124409433	protein_coding	Sf3a3	exon	ENSMUSG00000028902	ProperStrand	11	chr14	76247707	76247787	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-7.5418
chr15	25294464	25294482	protein_coding	Basp1	exon	ENSMUSG00000045763	ProperStrand	10	chr10	23505155	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-14.6690
chr13	100193270	100193321	protein_coding	Mtap1b	utr3	ENSMUSG00000052727	ProperStrand	76	chr16	23111391	23111481	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.9513
chr3	145312332	145312348	protein_coding	Cyr61	exon	ENSMUSG00000028195	ProperStrand	13	chr8	75177456	75180961	protein_coding	Nwd1	exon	ENSMUSG00000048148	ProperStrand	46	1	-17.0458
chr6	131337993	131338009	protein_coding	Csda	intron	ENSMUSG00000030189	ProperStrand	86	chr11	62418013	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-4.8582
chr2	125565274	125565295	protein_coding	Secisbp2l	utr3	ENSMUSG00000035093	ProperStrand	26	chr1	162968214	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	4	-inf
chr7	108079563	108079610	protein_coding	Arhgef17	exon	ENSMUSG00000032875	ProperStrand	33	chr14	76247786	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	3	-12.5128
chr2	28535677	28536762	protein_coding	Tsc1	exon	ENSMUSG00000026812	ProperStrand	29	chr4	116826700	116826766	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-8.2371
chr2	130617594	130617684	protein_coding	4930402H24Rik	exon	ENSMUSG00000027309	ProperStrand	16	chr2	22444205	22444285	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-10.4532
chr4	139572479	139572497	LTR	MERVL_2A-int	ERVL	chr4MERVL_2A-int139571531	ProperStrand	39	chr7	116663633	116663708	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.2756
chr5	24754676	24754762	protein_coding	Galnt11	exon	ENSMUSG00000038072	ProperStrand	8	chr10	127895517	127895568	tRNA	tRNA688-SerCGA	.	668725	ProperStrand	71	1	-17.0237
chr10	13354618	13354698	LINE	Lx7	L1	chr10Lx713354198	NonProperStrand	1	chr10	13354105	13354195	LTR	RLTR10A	ERVK	chr10RLTR10A13353954	NonProperStrand	1	1	-inf
chr7	52661677	52661693	protein_coding	Kcna7	utr5	ENSMUSG00000038201	ProperStrand	10	chr11	120209396	120209781	protein_coding	Actg1	utr5	ENSMUSG00000062825	ProperStrand	178	1	-14.7910
chr10	88412381	88412399	protein_coding	Ano4	utr3	ENSMUSG00000035189	ProperStrand	21	chr18	35714143	35714205	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-5.4554
chr12	105932852	105932882	protein_coding	Dicer1	exon	ENSMUSG00000041415	ProperStrand	61	chr19	47970971	47970987	protein_coding	Itprip	utr3	ENSMUSG00000079254	ProperStrand	75	1	-12.8324
chr14	31953025	31953118	protein_coding	Stab1	exon	ENSMUSG00000042286	NonProperStrand	127	chr7	52382014	52382037	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-5.2407
chr17	27248506	27248641	protein_coding	Itpr3	exon	ENSMUSG00000042644	ProperStrand	137	chr10	23505151	23505255	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-2.2981
chr9	44598074	44598095	protein_coding	Ift46	intron	ENSMUSG00000002031	NonProperStrand	28	chr16	23111735	23111825	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-5.5476
chr4	106588302	106682330	protein_coding	Ssbp3	exon	ENSMUSG00000061887	ProperStrand	36	chr1	162967540	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.4356
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr18	33954816	33954954	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	5	-1.3609
chr4	132850153	132850182	protein_coding	Wdtc1	exon	ENSMUSG00000037622	ProperStrand	81	chr2	31924012	31924028	protein_coding	Fam78a	utr3	ENSMUSG00000050592	NonProperStrand	340	1	-9.2357
chr7	29171540	29171558	protein_coding	Med29	utr3	ENSMUSG00000003444	NonProperStrand	134	chr11	77996560	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-4.5322
chr17	46155021	46155044	protein_coding	Vegfa	utr3	ENSMUSG00000023951	ProperStrand	43	chr7	116663689	116663763	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	5	-13.7050
chr2	90235315	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr18	60936087	60938088	protein_coding	Rps14	exon	ENSMUSG00000024608	ProperStrand	154	2	-4.7593
chr2	32801076	32801425	protein_coding	Lrsam1	exon	ENSMUSG00000026792	ProperStrand	80	chr9	44142863	44142953	protein_coding	H2afx	exon	ENSMUSG00000049932	ProperStrand	137	1	-11.0775
chr7	36424095	36424163	protein_coding	Ankrd27	utr3	ENSMUSG00000034867	ProperStrand	132	chr7	29136535	29136625	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.1623
chr17	27649644	27649660	protein_coding	Grm4	intron	ENSMUSG00000063239	ProperStrand	147	chr1	162967490	162967536	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-1.9269
chr11	97698683	97698773	protein_coding	Lasp1	utr3	ENSMUSG00000038366	ProperStrand	65	chr9	15119632	15119712	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-4.3971
chr1	79807295	79807315	protein_coding	Serpine2	exon	ENSMUSG00000026249	ProperStrand	11	chr19	8798775	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-8.1994
chr5	152445535	152445619	protein_coding	Rfc3	exon	ENSMUSG00000033970	ProperStrand	38	chr1	162967490	162967513	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.3319
chr9	32065078	32065178	protein_coding	Arhgap32	exon	ENSMUSG00000041444	ProperStrand	37	chr5	145576880	145576896	protein_coding	Trrap	exon	ENSMUSG00000045482	ProperStrand	399	1	-10.4927
chr8	73303579	73303628	protein_coding	Mast3	exon	ENSMUSG00000031833	ProperStrand	23	chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	1	-11.4287
chr11	87471339	87471355	protein_coding	Hsf5	utr3	ENSMUSG00000070345	ProperStrand	3	chr11	69481366	69481433	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-9.3812
chr9	78005613	78005713	protein_coding	Ick	exon	ENSMUSG00000009828	ProperStrand	6	chr9	53209398	53209436	protein_coding	Kdelc2	utr3	ENSMUSG00000034487	ProperStrand	3	2	-inf
chr8	107888513	107888612	protein_coding	Slc9a5	intron	ENSMUSG00000014786	ProperStrand	26	chr11	96998764	96998782	protein_coding	Tbkbp1	utr3	ENSMUSG00000038517	ProperStrand	10	5	-19.7028
chr2	51940654	51944186	protein_coding	Rif1	exon	ENSMUSG00000036202	ProperStrand	201	chr17	35299566	35299637	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	7	-17.3331
chr5	53174402	53174420	protein_coding	Zcchc4	exon	ENSMUSG00000029179	ProperStrand	15	chr4	131908379	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.7937
chr4	134898399	134898457	protein_coding	Srrm1	exon	ENSMUSG00000028809	ProperStrand	142	chr17	71990923	71990999	snoRNA	ENSMUSG00000092713_CT010429.1	.	ENSMUSG00000092713	ProperStrand	182	1	-9.3596
chr1	89122785	89124412	protein_coding	Eif4e2	exon	ENSMUSG00000026254	ProperStrand	26	chr1	89673687	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-4.8439
chr1	162968213	162968289	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	chr3	153574606	153574654	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	1	-3.3317
chr4	128895850	128895882	protein_coding	Yars	utr3	ENSMUSG00000028811	ProperStrand	131	chr9	78326382	78326445	protein_coding	Eef1a1	utr3	ENSMUSG00000037742	ProperStrand	1990	1	-4.8113
chr13	9833561	9833680	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	mmu-miR-1949	0	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	8	-9.8052
chr11	75131918	75132018	protein_coding	Rpa1	exon	ENSMUSG00000000751	ProperStrand	37	chr5	130300476	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.3697
chr2	20441507	20451587	protein_coding	Etl4	utr5	ENSMUSG00000036617	ProperStrand	86	chr9	63042015	63042031	protein_coding	Map2k5	exon	ENSMUSG00000058444	ProperStrand	193	1	-10.2465
chr16	22010005	22010025	protein_coding	Senp2	intron	ENSMUSG00000022855	ProperStrand	13	chr8	94881826	94881843	protein_coding	Irx5	utr5	ENSMUSG00000031737	NonProperStrand	9	1	-19.9343
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr2	32818889	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-1.4579
chr19	8963027	8963118	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	chr8	113366286	113366353	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	4	-0.8536
chr6	88040175	88040239	protein_coding	Rpn1	exon	ENSMUSG00000030062	ProperStrand	58	chr4	88367873	88367889	protein_coding	Klhl9	exon	ENSMUSG00000070923	ProperStrand	7	2	-inf
chr8	119903555	119903572	protein_coding	4933407C03Rik	intron	ENSMUSG00000034390	NonProperStrand	32	chr11	106362640	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-8.6656
chr1	162965509	162965564	non_coding	Gas5	.	ENSMUSG00000053332	ProperStrand	144	chr1	162965564	162965602	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-3.2730
chrX	71589886	71589907	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr2	158184092	158184208	snoRNA	ENSMUSG00000064995_SNORA71	.	ENSMUSG00000064995	ProperStrand	430	1	-6.2318
chr2	122357065	122357083	SINE	RSINE1	B4	chr2RSINE1122356927	NonProperStrand	1	chr5	138609131	138609192	protein_coding	Mcm7	exon	ENSMUSG00000029730	ProperStrand	258	1	-inf
chr2	32087004	32087123	protein_coding	Prrc2b	utr3	ENSMUSG00000039262	ProperStrand	344	chr11	62416633	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-2.0010
mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr6	115757992	115758077	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	5	-1.5824
chr8	39436369	39436386	protein_coding	Sgcz	intron	ENSMUSG00000039539	ProperStrand	46	chr2	26493413	26493487	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-4.2428
chr4	117910571	117921505	protein_coding	Ptprf	exon	ENSMUSG00000033295	ProperStrand	337	chr2	138188029	138188045	protein_coding	Btbd3	intron	ENSMUSG00000062098	NonProperStrand	121	1	-8.4512
chr11	119136228	119136244	protein_coding	Gaa	exon	ENSMUSG00000025579	NonProperStrand	201	chr5	111238605	111238650	protein_coding	Ulk1	intron	ENSMUSG00000029512	ProperStrand	92	1	-10.0299
chr7	31353901	31353936	protein_coding	Wbp7	utr3	ENSMUSG00000006307	ProperStrand	180	chr11	86570774	86570804	protein_coding	Cltc	utr5	ENSMUSG00000047126	ProperStrand	319	1	-7.7697
chr2	179238519	179630616	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr16	23110895	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	7	-0.9048
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chrX	84483703	84483750	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-3.0968
chr4	137100358	137100522	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	chr13	51743572	51743662	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	3	-5.5062
chr4	131908356	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	chr7	29158087	29158117	tRNA	tRNA156-IleTAT	.	1469297	ProperStrand	4	1	-6.5415
chr4	26205373	26205463	LTR	RMER19B	ERVK	chr4RMER19B26204950	NonProperStrand	1	chr7	54443175	54443265	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	1	-inf
chr13	12307789	12307807	protein_coding	Mtr	exon	ENSMUSG00000021311	ProperStrand	22	chr2	158185571	158185653	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	3	-18.7247
chr16	87484252	87484289	protein_coding	Cct8	exon	ENSMUSG00000025613	ProperStrand	65	chr7	116664797	116664887	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	4	-8.7946
chr6	143010315	143010361	protein_coding	5730419I09Rik	exon	ENSMUSG00000030279	ProperStrand	81	chr12	72411179	72411195	protein_coding	Dact1	exon	ENSMUSG00000044548	ProperStrand	11	1	-16.1466
chr2	29535272	29594094	protein_coding	Rapgef1	exon	ENSMUSG00000039844	ProperStrand	58	chr7	116663647	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-4.5219
chrX	19683228	19683244	protein_coding	Slc9a7	exon	ENSMUSG00000037341	NonProperStrand	136	chr14	76247752	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-2.6809
chr14	14951468	14951558	protein_coding	Psmd6	intron	ENSMUSG00000021737	ProperStrand	10	chr12	60141322	60141402	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-10.4750
chr5	107596660	107596682	protein_coding	Tgfbr3	intron	ENSMUSG00000029287	ProperStrand	27	chr5	28403536	28403667	protein_coding	Insig1	utr3	ENSMUSG00000045294	ProperStrand	35	1	-16.0264
chr18	12172461	12172477	protein_coding	6030446N20Rik	intron	ENSMUSG00000049411	ProperStrand	235	chr3	123210853	123210972	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-0.8335
chr3	89744696	89744730	protein_coding	Atp8b2	utr3	ENSMUSG00000060671	ProperStrand	140	chr12	81492598	81492713	snoRNA	ENSMUSG00000088158_Scarna3b	.	ENSMUSG00000088158	ProperStrand	147	4	-20.1300
chr11	77412263	77412283	protein_coding	Taok1	intron	ENSMUSG00000017291	ProperStrand	41	chr10	69255565	69255581	protein_coding	Ank3	intron	ENSMUSG00000069601	ProperStrand	76	1	-13.6116
chr1	187178171	187178190	protein_coding	Bpnt1	intron	ENSMUSG00000026617	NonProperStrand	3	chr18	35716842	35716873	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-8.1910
chr11	100581379	100581396	protein_coding	Rab5c	utr5	ENSMUSG00000019173	ProperStrand	76	chr13	45002890	45002919	protein_coding	Jarid2	exon	ENSMUSG00000038518	ProperStrand	372	1	-9.1841
chrX	99380958	99380982	protein_coding	Rps4x	exon	ENSMUSG00000031320	ProperStrand	139	chr11	96689109	96689229	protein_coding	Nfe2l1	utr5	ENSMUSG00000038615	ProperStrand	118	1	-10.2687
chr7	133637276	133637316	protein_coding	Atxn2l	exon	ENSMUSG00000032637	ProperStrand	219	chr7	29136576	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-2.1147
chr1	141319671	141319687	protein_coding	Zbtb41	utr5	ENSMUSG00000033964	NonProperStrand	145	chr11	68853906	68853960	tRNA	tRNA396-ProCGG	.	1859846	ProperStrand	48	1	-11.9914
chr7	71063793	71063814	protein_coding	Klf13	intron	ENSMUSG00000052040	ProperStrand	28	chr7	116663630	116663719	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.8921
chr14	33005139	33005236	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	chr2	37255621	37255660	snoRNA	ENSMUSG00000077756_Snord90	.	ENSMUSG00000077756	ProperStrand	167	1	-2.1736
chr9	64023233	64023329	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	chr12	110874224	110874291	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	8	-18.9716
chr4	118951643	118966842	protein_coding	Ybx1	exon	ENSMUSG00000028639	ProperStrand	171	chr16	23110827	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	7	-0.9048
chr11	98753475	98753500	protein_coding	Wipf2	exon	ENSMUSG00000038013	ProperStrand	30	chr17	35088971	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-7.2453
chr2	129627539	129627602	protein_coding	Stk35	exon	ENSMUSG00000037885	ProperStrand	28	chr2	3415447	3416539	protein_coding	Hspa14	exon	ENSMUSG00000051396	ProperStrand	23	1	-16.6849
chr5	121204666	121206048	protein_coding	Oas3	exon	ENSMUSG00000032661	ProperStrand	8	chr5	111121108	111121198	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	3	-19.8755
chrX	98900794	98900894	Low_complexity	GA-rich	Low_complexity	chrXGA-rich98900774	ProperStrand	2	chr16	11196379	11196397	protein_coding	Rsl1d1	exon	ENSMUSG00000005846	ProperStrand	65	1	-inf
chr11	59146317	59146418	protein_coding	Wnt9a	utr3	ENSMUSG00000000126	ProperStrand	19	chr1	162967523	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	19	-inf
chr1	135530366	135530382	protein_coding	Zc3h11a	exon	ENSMUSG00000026464	NonProperStrand	8	chr7	51505506	51505591	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	1	-12.9167
chr17	74988992	74989072	protein_coding	Birc6	exon	ENSMUSG00000024073	ProperStrand	110	chr19	5382975	5383065	protein_coding	Sart1	exon	ENSMUSG00000039148	ProperStrand	32	1	-13.3664
chr19	44375808	44375853	protein_coding	Scd2	exon	ENSMUSG00000025203	ProperStrand	219	chr10	110918595	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	3	-3.9337
chr2	90235314	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	14975976	14977551	protein_coding	Arhgef10	exon	ENSMUSG00000071176	ProperStrand	22	1	-6.4314
mmu-miR-5100	5	20	miRNA	mmu-miR-5100	.	mmu-miR-5100	ProperStrand	132	chr10	90581061	90581161	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-3.3269
chr2	24825186	24827046	protein_coding	Wdr85	exon	ENSMUSG00000026975	ProperStrand	323	chr6	71832629	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-2.4839
chr8	9791740	9791820	LINE	Lx5	L1	chr8Lx59791457	NonProperStrand	1	chr18	72020785	72020875	protein_coding	Dcc	intron	ENSMUSG00000060534	ProperStrand	12	1	-inf
chr19	61300644	61300660	protein_coding	Csf2ra	utr3	ENSMUSG00000059326	NonProperStrand	2	chr14	31827477	31827516	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-14.4005
chr17	36032861	36032933	protein_coding	2310061I04Rik	exon	ENSMUSG00000050705	ProperStrand	8	chr5	130300519	130300556	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-6.3882
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr8	32260335	32260400	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-0.9647
chr11	107340855	107340912	protein_coding	Psmd12	utr5	ENSMUSG00000020720	ProperStrand	31	chr19	10684828	10684898	protein_coding	Ddb1	intron	ENSMUSG00000024740	ProperStrand	304	1	-11.3947
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr4	116826536	116826947	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	1	-2.2654
chr11	62416578	62416642	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	NonProperStrand	13	chr7	29136561	29136600	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	NonProperStrand	27	1	-17.9269
chrX	103214926	103214957	protein_coding	Cox7b	exon	ENSMUSG00000031231	ProperStrand	16	chr5	130300458	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	8	-inf
chrX	70237450	70237471	miRNA	Mir2137	.	ENSMUSG00000089357	ProperStrand	50	chr16	23110899	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.0847
chrX	140785843	140785894	protein_coding-noncoding	Alg13	utr3	ENSMUSG00000041718	ProperStrand	87	chr15	79908929	79908986	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-4.7525
chrX	71517874	71517903	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	chr11	6520321	6520425	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	1	-1.4721
chr14	36831465	36831545	LINE	Lx7	L1	chr14Lx736831476	ProperStrand	1	chr14	36831353	36831443	LTR	RMER17B	ERVK	chr14RMER17B36830455	ProperStrand	1	1	-inf
chr11	106852068	106852145	protein_coding	Kpna2	exon	ENSMUSG00000018362	ProperStrand	70	chr17	24857794	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.0429
chr12	82051096	82051127	protein_coding	Srsf5	utr3	ENSMUSG00000021134	ProperStrand	68	chr10	23505161	23505251	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-3.3885
chr1	135608312	135611650	protein_coding	Atp2b4	exon	ENSMUSG00000026463	ProperStrand	42	chr7	118219603	118219636	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-4.8539
chr11	74658308	74658336	protein_coding	Mnt	utr3	ENSMUSG00000000282	ProperStrand	56	chr5	77738902	77738918	protein_coding	Noa1	exon	ENSMUSG00000036285	ProperStrand	147	1	-11.6538
chr10	77451497	77451674	protein_coding	Pfkl	exon	ENSMUSG00000020277	ProperStrand	179	chr11	91438238	91438254	protein_coding	Kif2b	exon	ENSMUSG00000046755	NonProperStrand	5	4	-19.0516
chr3	94820057	94820182	lincRNA	4930481B07Rik	exon	ENSMUSG00000085956	NonProperStrand	2	chrX	54180183	54180201	protein_coding	Gpr112	intron	ENSMUSG00000053852	NonProperStrand	5	1	-21.6030
chr18	10052132	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr12	104663677	104663695	protein_coding	Ddx24	intron	ENSMUSG00000041645	NonProperStrand	23	1	-10.7388
chr2	72094558	72094574	protein_coding	Rapgef4	utr3	ENSMUSG00000049044	NonProperStrand	11	chr11	6428076	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-6.4917
chr14	76926611	76926627	LINE	L1MB3	L1	chr14L1MB376926376	ProperStrand	61	chr6	40316763	40318616	protein_coding	Agk	exon	ENSMUSG00000029916	ProperStrand	6	1	-17.8701
chr10	50636155	50636245	protein_coding	Sim1	intron	ENSMUSG00000019913	NonProperStrand	2	chr1	169705867	169705957	protein_coding	Lmx1a	intron	ENSMUSG00000026686	NonProperStrand	7	1	-inf
chr8	85276549	85276566	LTR	IAP-d-int	ERVK	chr8IAP-d-int85276155	ProperStrand	26	chr8	73419657	73419775	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.7022
chr13	23663618	23663718	protein_coding	Hist1h2bg	utr3	ENSMUSG00000058385	ProperStrand	29	chr16	23111768	23111824	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	10	-inf
chr11	106536473	106558563	protein_coding	Pecam1	intron	ENSMUSG00000020717	ProperStrand	56	chr4	131908236	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	10	-19.4674
chr5	100855944	100855974	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr10	23505145	23505184	protein_coding	Rps12	intron	ENSMUSG00000061983	ProperStrand	309	2	-5.9258
chr8	12757419	12757437	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr3	19528533	19528550	protein_coding	1700064H15Rik	exon	ENSMUSG00000082766	NonProperStrand	78	1	-8.0683
chr7	74215566	74215584	protein_coding	Adamts17	exon	ENSMUSG00000058145	ProperStrand	44	chr7	148634698	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-7.6130
chr7	30116327	30116384	protein_coding	Sipa1l3	exon	ENSMUSG00000030583	ProperStrand	559	chr12	17552950	17553030	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-1.2217
chr4	55363276	55395480	protein_coding	Rad23b	exon	ENSMUSG00000028426	ProperStrand	86	chr16	23111373	23111478	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-1.6479
chr8	98257003	98257074	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	chr5	130300460	130300550	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-1.4370
chr6	11911402	11911419	protein_coding	Phf14	intron	ENSMUSG00000029629	ProperStrand	26	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-7.5077
chr2	91460107	91460125	protein_coding	Ckap5	intron	ENSMUSG00000040549	NonProperStrand	3	chr4	131865856	131865922	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.6896
chr2	71085921	71085937	protein_coding	Dync1i2	exon	ENSMUSG00000027012	NonProperStrand	58	chr3	57378820	57378838	protein_coding	Wwtr1	exon	ENSMUSG00000027803	ProperStrand	7	1	-17.9852
chr8	86782815	86784198	protein_coding	Ccdc130	exon	ENSMUSG00000004994	ProperStrand	29	chr10	75322172	75322204	protein_coding	Mif	utr3	ENSMUSG00000033307	ProperStrand	146	1	-13.0013
chr9	15118543	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	chr17	35089182	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-1.8865
chr7	87658162	87658262	protein_coding	Blm	exon	ENSMUSG00000030528	ProperStrand	35	chr7	52378401	52378465	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	1	-9.5887
chr11	7067186	7069426	protein_coding	Adcy1	exon	ENSMUSG00000020431	ProperStrand	183	chr15	93376367	93376414	protein_coding	Prickle1	intron	ENSMUSG00000036158	ProperStrand	11	1	-14.5382
chr4	115164807	115164823	protein_coding	Cyp4a14	exon	ENSMUSG00000028715	ProperStrand	14	chr3	95978342	95978449	protein_coding	Sf3b4	exon	ENSMUSG00000068856	ProperStrand	40	1	-17.1956
chr12	107065253	107075393	protein_coding	Papola	exon	ENSMUSG00000021111	ProperStrand	67	chr9	120039533	120039667	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	5	-13.6611
chr4	155562119	155562209	protein_coding	Agrn	intron	ENSMUSG00000041936	ProperStrand	175	chr4	131865409	131865489	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-2.1047
chr2	120433965	120433982	protein_coding	Lrrc57	intron	ENSMUSG00000027286	NonProperStrand	1	chr13	44965328	44965392	protein_coding	Jarid2	intron	ENSMUSG00000038518	ProperStrand	372	1	-inf
chr16	91818789	91818806	protein_coding	Atp5o	intron	ENSMUSG00000022956	ProperStrand	37	chr10	39978333	39978484	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	8	-19.8680
chr11	7067186	7069426	protein_coding	Adcy1	exon	ENSMUSG00000020431	ProperStrand	183	chr3	68889072	68889145	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-1.4154
chr13	55749111	55751833	protein_coding	Ddx46	exon	ENSMUSG00000021500	ProperStrand	87	chr19	8798744	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-4.0927
chr11	7067186	7069426	protein_coding	Adcy1	exon	ENSMUSG00000020431	ProperStrand	183	chr11	101304833	101304866	protein_coding	Rpl27	exon	ENSMUSG00000063316	ProperStrand	96	1	-10.1322
chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	chr3	153575148	153575168	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	1	-4.3355
chr12	41268522	41268620	protein_coding	Dock4	intron	ENSMUSG00000035954	ProperStrand	41	chr17	35088957	35089014	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-6.6208
chr7	140955174	140955198	protein_coding	Dhx32	intron	ENSMUSG00000030986	ProperStrand	100	chr2	26494788	26494829	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.2224
chr14	63760582	63760638	protein_coding	Ctsb	exon	ENSMUSG00000021939	ProperStrand	48	chr16	23111436	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-6.4872
chr14	124353869	124353886	protein_coding	Itgbl1	exon	ENSMUSG00000032925	ProperStrand	159	chr2	26748050	26748085	protein_coding	Surf6	exon	ENSMUSG00000036160	ProperStrand	7	1	-15.7910
chr10	79322394	79322457	protein_coding	Ptbp1	exon	ENSMUSG00000006498	ProperStrand	129	chr7	52715078	52715168	protein_coding	Ftl1	utr5	ENSMUSG00000050708	ProperStrand	807	1	-6.5957
chr8	13416897	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr8	81895828	81895948	protein_coding	Smad1	exon	ENSMUSG00000031681	ProperStrand	45	1	-7.0257
chr7	117189866	117189933	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr10	41635953	41635988	protein_coding	Armc2	utr3	ENSMUSG00000071324	ProperStrand	281	5	-14.0000
chr17	45722683	45723058	protein_coding	Slc29a1	exon	ENSMUSG00000023942	ProperStrand	95	chr11	67167096	67167112	protein_coding	Myh13	exon	ENSMUSG00000060180	ProperStrand	145	1	-10.6188
chr1	162968441	162968498	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	chr10	90581034	90581282	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	13	-7.1314
chr12	17552972	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr9	64024485	64024565	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	1	-0.9135
chr4	126114666	126114696	protein_coding	Eif2c1	utr3	ENSMUSG00000041530	ProperStrand	30	chr3	123210853	123210892	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.2714
chr1	134195368	134195386	protein_coding	Klhdc8a	utr5	ENSMUSG00000042115	ProperStrand	1	chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-inf
chr11	100987353	100987371	protein_coding	Tubg1	exon	ENSMUSG00000035198	NonProperStrand	3	chr7	52382754	52382832	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-13.1003
chrX	148292441	148364701	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	chr16	23110829	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	24	-1.6818
chr10	128243646	128243726	protein_coding	Dnajc14	exon	ENSMUSG00000025354	ProperStrand	11	chr7	116663669	116663759	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-9.4787
chr5	111224061	111224082	protein_coding	Ulk1	intron	ENSMUSG00000029512	NonProperStrand	11	chr9	15118245	15118322	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	3	-15.7810
chr14	47729643	47729661	antisense	Gm10371	.	ENSMUSG00000072589	ProperStrand	3	chr3	121161061	121161102	protein_coding	Cnn3	utr3	ENSMUSG00000053931	ProperStrand	77	2	-inf
chr3	108189447	108189514	protein_coding	Psrc1	exon	ENSMUSG00000068744	ProperStrand	38	chr1	162965562	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.1263
chr11	14961829	14961849	LINE	Lx	L1	chr11Lx14961726	ProperStrand	93	chr11	106362303	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-4.9886
chr11	4896251	4896341	protein_coding	Ap1b1	intron	ENSMUSG00000009090	ProperStrand	43	chr12	106269475	106269555	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-4.7776
chr19	30177475	30206194	protein_coding	Gldc	exon	ENSMUSG00000024827	ProperStrand	175	chr7	29136548	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-1.6570
chr17	35292545	35292594	protein_coding	Prrc2a	exon	ENSMUSG00000024393	ProperStrand	315	chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	1	-5.5477
chr3	88715212	88715229	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr5	115939468	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-2.1258
chr3	105762123	105762143	protein_coding	Atp5f1	utr5	ENSMUSG00000000563	ProperStrand	28	chr2	31659686	31659703	protein_coding	Abl1	utr3	ENSMUSG00000026842	ProperStrand	131	1	-13.2861
chr15	102111366	102111389	protein_coding	Mfsd5	exon	ENSMUSG00000045665	ProperStrand	26	chr5	130300448	130300538	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.0304
chr1	74680632	74680648	protein_coding	Stk36	exon	ENSMUSG00000033276	NonProperStrand	4	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-8.7752
chr12	88488443	88496424	protein_coding	Pomt2	exon	ENSMUSG00000034126	NonProperStrand	331	chr1	162966812	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-3.0179
chr14	37934742	37934760	protein_coding	Ghitm	utr3	ENSMUSG00000041028	NonProperStrand	11	chr9	15119631	15119746	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-9.6817
chr13	62944660	62944677	protein_coding	Fbp2	intron	ENSMUSG00000021456	ProperStrand	100	chr4	116827119	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-6.0308
chr2	71664633	71664826	protein_coding	Itga6	exon	ENSMUSG00000027111	ProperStrand	54	chr10	120415013	120415069	protein_coding	Lemd3	exon	ENSMUSG00000048661	ProperStrand	32	1	-14.7914
chr7	35216701	35216718	LINE	L1M4b	L1	chr7L1M4b35216550	ProperStrand	31	chr4	116827121	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-8.3632
chr13	9833549	9833676	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	5	-6.4739
chr16	35156665	35156682	protein_coding	Adcy5	exon	ENSMUSG00000022840	ProperStrand	5	chr16	23111448	23111500	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-5.8178
chr7	118218891	118219136	protein_coding	Eif4g2	exon	ENSMUSG00000005610	ProperStrand	134	chr1	162967544	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	14	-20.1326
chr4	46554810	46554826	protein_coding	Coro2a	exon	ENSMUSG00000028337	NonProperStrand	24	chr16	23110454	23110521	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.1305
chr2	118649451	118654713	protein_coding	D2Ertd750e	exon	ENSMUSG00000027331	ProperStrand	26	chr7	117189980	117190024	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	6	-inf
chr5	111814542	111814609	protein_coding	Pitpnb	utr3	ENSMUSG00000050017	ProperStrand	137	chr17	35299540	35299630	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-3.2313
chr10	68803236	68803297	protein_coding	Cdk1	exon	ENSMUSG00000019942	ProperStrand	42	chr7	52382766	52382832	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	3	-16.7472
chr11	115851147	115851341	protein_coding	Itgb4	exon	ENSMUSG00000020758	ProperStrand	8	chr4	131865426	131865453	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-8.0307
chr6	47738067	47738092	misc_RNA	Y_RNA	.	ENSMUSG00000065701	ProperStrand	129	chr19	8799829	8799886	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	2	-5.9499
chr8	86464051	86464116	protein_coding	Lphn1	utr3	ENSMUSG00000013033	ProperStrand	221	chr2	26768408	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-3.1384
chr2	165140294	165140376	protein_coding	Elmo2	intron	ENSMUSG00000017670	ProperStrand	14	chr14	31827478	31827500	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-9.8897
chr13	23636712	23636774	protein_coding	Hist1h3f	utr3	ENSMUSG00000059309	ProperStrand	26	chr19	8798743	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	2	-10.4657
chr9	65044376	65044476	snRNA	ENSMUSG00000075763_U5	.	ENSMUSG00000075763	ProperStrand	216	chr7	29136575	29136655	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	15	-19.2639
chr10	70649553	70649574	LTR	MTEb-int	MaLR	chr10MTEb-int70649328	NonProperStrand	3	chr11	69481335	69481457	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-9.3812
chr2	73434618	73434634	antisense	Gm13704	.	ENSMUSG00000086544	NonProperStrand	53	chr7	29137222	29137281	protein_coding	Rps16	exon	ENSMUSG00000037563	ProperStrand	191	1	-11.2404
chr10	20868636	20868653	lincRNA	Gm16786	intron	ENSMUSG00000084914	ProperStrand	2	chr5	130295415	130295548	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	2	-inf
chr14	62177341	62177367	SINE	MIRc	MIR	chr14MIRc62177320	NonProperStrand	1	chr9	36587362	36587418	protein_coding	Ei24	utr3	ENSMUSG00000062762	ProperStrand	25	1	-inf
chr4	46343435	46343454	antisense	Gm12446	.	ENSMUSG00000087383	NonProperStrand	2	chr3	101182107	101182170	protein_coding	Igsf3	utr5	ENSMUSG00000042035	ProperStrand	73	1	-21.4012
chr4	35151369	35151387	protein_coding	3110043O21Rik	intron	ENSMUSG00000028300	ProperStrand	4	chr7	116663634	116663708	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-inf
chr1	71673845	71674644	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr6	71832550	71832572	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	3	-2.9757
chr4	131908434	131908461	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr5	115939533	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-2.1467
chr14	33194605	33194622	protein_coding	1700024G13Rik	intron	ENSMUSG00000072473	NonProperStrand	4	chr12	60141443	60141499	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-12.4879
chr17	27162831	27165374	protein_coding	Bak1	utr5	ENSMUSG00000057789	ProperStrand	17	chrX	34622958	34623022	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	3	-13.1691
chr1	155754236	155754464	protein_coding	Glul	exon	ENSMUSG00000026473	ProperStrand	54	chr19	8800378	8800458	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	23	-inf
chr13	23622206	23622230	lincRNA	Gm11335	intron	ENSMUSG00000085016	ProperStrand	20	chr4	131908689	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-7.8128
chr2	26493364	26493503	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr16	23111694	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	87	-0.7110
chr9	102588929	102589019	LINE	L1M5	L1	chr9L1M5102588831	ProperStrand	1	chr9	102589080	102589170	SINE	B1_Mur2	Alu	chr9B1_Mur2102589038	ProperStrand	1	1	-inf
chr13	73463407	73463423	protein_coding	Ndufs6	intron	ENSMUSG00000021606	NonProperStrand	52	chr4	131908821	131908903	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-2.6981
chr15	81654691	81654781	protein_coding	Tef	utr3	ENSMUSG00000022389	ProperStrand	12	chr10	23505186	23505266	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-10.0058
chr13	51743571	51743707	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	chr3	123210853	123210987	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	17	-1.1801
chr12	24334659	24334749	DNA	MER63C	AcHobo	chr12MER63C24334431	NonProperStrand	7	chr4	56910567	56910629	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	4	-inf
chr17	30180328	30180344	protein_coding	Zfand3	intron	ENSMUSG00000044477	ProperStrand	20	chr17	26360446	26360503	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	1	-12.2563
chr5	115939505	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr2	130103451	130103500	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	9	-19.5880
chr17	73863006	73863024	protein_coding	Galnt14	intron	ENSMUSG00000024064	NonProperStrand	5	chr18	35714187	35714262	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-8.4504
chr18	34804126	34804152	protein_coding	Cdc23	intron	ENSMUSG00000024370	ProperStrand	48	chr1	162967490	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-3.8891
chr2	90235298	90235345	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr16	8750108	8750125	protein_coding	Usp7	intron	ENSMUSG00000022710	NonProperStrand	11	1	-7.8469
chr14	54992718	54993560	protein_coding	Slc7a7	exon	ENSMUSG00000000958	ProperStrand	44	chr4	131865411	131865491	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-4.5926
chr4	118954767	118954819	protein_coding	Ybx1	exon	ENSMUSG00000028639	ProperStrand	171	chrX	160347488	160347504	protein_coding	Ap1s2	intron	ENSMUSG00000031367	ProperStrand	52	1	-11.5001
chr14	82106496	82106514	LINE	Lx5	L1	chr14Lx582106496	NonProperStrand	1	chr9	59526614	59526714	protein_coding	Pkm2	utr3	ENSMUSG00000032294	ProperStrand	1296	1	-inf
chr10	40367179	40367196	protein_coding	Ddo	intron	ENSMUSG00000063428	NonProperStrand	9	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-11.0757
chr16	23111691	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	chr2	144087324	144087462	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	24	-1.7478
chr4	43435213	43435303	protein_coding-noncoding	Rusc2	utr5	ENSMUSG00000035969	ProperStrand	1	chr4	43434782	43434862	protein_coding	Rusc2	exon	ENSMUSG00000035969	ProperStrand	22	1	-inf
chr6	70794802	70794819	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chr4	122968617	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	5	-17.6728
chr8	40681587	40681603	protein_coding	Msr1	intron	ENSMUSG00000025044	ProperStrand	138	chr5	108336377	108336408	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-3.3159
chr2	164595893	164596826	protein_coding	Ube2c	exon	ENSMUSG00000001403	ProperStrand	40	chr1	162967515	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	3	-10.2655
chr1	88247768	88247868	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	chr7	52381722	52381772	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	10	-11.5288
chr4	59052373	59052390	protein_coding	Gm20503	intron	ENSMUSG00000092345	NonProperStrand	1	chr11	6428108	6428156	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-inf
chr14	37934742	37934760	protein_coding	Ghitm	utr3	ENSMUSG00000041028	NonProperStrand	11	chr2	158182215	158182279	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-8.4080
chrX	7502007	7502068	protein_coding	Eras	exon	ENSMUSG00000031160	ProperStrand	2	chr9	15119718	15119764	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-9.8289
chr10	79756565	79756617	protein_coding	Rps15	exon	ENSMUSG00000063457	ProperStrand	119	chr4	131865879	131865979	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.8323
chr5	100855905	100855943	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr5	136610599	136611822	protein_coding	Lrwd1	utr5	ENSMUSG00000029703	ProperStrand	27	1	-8.2366
chr2	11394283	11394373	protein_coding	Pfkfb3	utr3	ENSMUSG00000026773	ProperStrand	27	chr4	131908715	131908795	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	6	-14.7435
chr17	36137075	36137165	antisense	A930015D03Rik	.	ENSMUSG00000092368	NonProperStrand	2	chr5	111811343	111811423	protein_coding	Pitpnb	intron	ENSMUSG00000050017	NonProperStrand	2	1	-inf
chr4	135981396	135981423	protein_coding	Htr1d	intron	ENSMUSG00000070687	NonProperStrand	21	chr17	35089180	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	2	-12.1823
chrX	71032520	71032594	protein_coding	Ssr4	utr5	ENSMUSG00000002014	ProperStrand	2	chr8	13876112	13876202	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-14.6016
chr19	45081288	45081304	protein_coding	Peo1	utr5	ENSMUSG00000025209	ProperStrand	8	chr19	8963027	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-6.1145
chr2	4829164	4829180	protein_coding	Sephs1	utr3	ENSMUSG00000026662	NonProperStrand	271	chr9	120039533	120039586	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-0.9406
chr11	4828767	4828867	protein_coding	Thoc5	utr3	ENSMUSG00000034274	ProperStrand	325	chr16	23110530	23110584	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	7	-5.2046
chr3	90280162	90281244	protein_coding	Ilf2	exon	ENSMUSG00000001016	ProperStrand	28	chr4	131865393	131865458	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-5.4736
chr13	98265281	98265305	lincRNA	Gm11019	exon	ENSMUSG00000078952	ProperStrand	113	chr5	113515930	113515946	protein_coding	2900026A02Rik	utr3	ENSMUSG00000051339	NonProperStrand	29	1	-13.5155
chr2	130101983	130102087	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	chr15	34370545	34370661	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	21	-3.2999
chr6	134400870	134400914	protein_coding	Lrp6	exon	ENSMUSG00000030201	ProperStrand	42	chr9	63868722	63868739	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	1	-9.3035
chr5	115918246	115918287	protein_coding	Pla2g1b	intron	ENSMUSG00000029522	ProperStrand	11	chr17	13112450	13112540	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-7.9692
chr9	64023290	64023334	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	chr15	71624775	71624798	snoRNA	ENSMUSG00000088895_SNORA81	.	ENSMUSG00000088895	ProperStrand	348	1	-4.9824
chr14	8650576	8650635	protein_coding	Flnb	utr5	ENSMUSG00000025278	ProperStrand	124	chr7	29136584	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.2463
chr3	123210870	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	chr14	52829460	52829562	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	8	-0.9184
chr2	90235292	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	88252836	88252865	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	4	-0.7282
chr10	25976379	25976395	protein_coding	Samd3	intron	ENSMUSG00000051354	NonProperStrand	11	chr1	162965980	162966035	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-11.2983
chr16	96391523	96391613	protein_coding	Lca5l	intron	ENSMUSG00000045275	NonProperStrand	210	chr4	131865426	131865506	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-1.8147
chr6	87840195	87840245	protein_coding	Copg	exon	ENSMUSG00000030058	ProperStrand	68	chr2	26493390	26493490	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-5.9744
chr13	23665806	23665906	protein_coding	Hist1h2bf	exon	ENSMUSG00000069268	ProperStrand	5	chr10	23505152	23505187	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-5.7809
chr11	62416575	62416593	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr2	125499562	125499579	protein_coding	Eid1	utr3	ENSMUSG00000091337	ProperStrand	60	1	-8.9716
chr11	3426340	3426430	protein_coding	Smtn	exon	ENSMUSG00000020439	ProperStrand	222	chr7	148634723	148634803	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-1.7158
chr2	121137008	121137109	protein_coding	Ppip5k1	utr3	ENSMUSG00000033526	ProperStrand	85	chr4	131865860	131865915	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.2579
chr4	123059673	123059865	protein_coding	Macf1	exon	ENSMUSG00000028649	ProperStrand	320	chr7	148634768	148634837	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-1.1910
chr9	15069885	15069901	protein_coding	Med17	exon	ENSMUSG00000031935	ProperStrand	135	chr17	24857738	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	5	-6.5515
chr6	122576723	122576823	protein_coding	Dppa3	intron	ENSMUSG00000046323	ProperStrand	2	chr11	62416630	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-12.5746
chr7	149562437	149562477	protein_coding	Ctsd	utr3	ENSMUSG00000007891	ProperStrand	60	chr4	131908236	131908300	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-2.6858
chrX	152009278	152009294	protein_coding	Ptchd1	exon	ENSMUSG00000041552	NonProperStrand	294	chr11	6428102	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-0.7650
chr16	23110564	23110583	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr17	24665420	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	3	-3.7373
chr6	115742094	115742110	protein_coding	Cand2	exon	ENSMUSG00000030319	NonProperStrand	21	chr2	26494778	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.0955
chr9	110076435	110077561	protein_coding	Smarcc1	exon	ENSMUSG00000032481	ProperStrand	108	chr7	117189928	117190008	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.3020
chr18	44555634	44555651	protein_coding	Dcp2	exon	ENSMUSG00000024472	ProperStrand	44	chr2	167433951	167433968	protein_coding	Gm20431	utr3	ENSMUSG00000089739	NonProperStrand	18	1	-16.3716
chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	chr1	72895774	72895833	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	1	-5.9606
chr14	61825602	61825657	protein_coding	Sacs	exon	ENSMUSG00000048279	ProperStrand	65	chr11	16307999	16308016	protein_coding	Vstm2a	intron	ENSMUSG00000048834	NonProperStrand	13	1	-16.2588
chr16	31455131	31455184	protein_coding	Bdh1	exon	ENSMUSG00000046598	ProperStrand	17	chr2	153056135	153056187	protein_coding	Plagl2	utr3	ENSMUSG00000051413	ProperStrand	7	3	-inf
chr12	114296271	114296361	protein_coding	Pacs2	intron	ENSMUSG00000021143	ProperStrand	14	chr12	114363543	114363633	protein_coding	Mta1	intron	ENSMUSG00000021144	NonProperStrand	11	1	-20.0608
chr4	131908643	131908747	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr2	35949551	35949567	protein_coding	Lhx6	intron	ENSMUSG00000026890	NonProperStrand	17	1	-9.8072
chr10	6063958	6063977	protein_coding	Akap12	intron	ENSMUSG00000038587	ProperStrand	1008	chr2	91436228	91436336	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	2	-3.8998
chr4	59488560	59488622	protein_coding	Rod1	utr3	ENSMUSG00000028382	ProperStrand	52	chr3	123210890	123210980	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-6.1972
chr19	6982595	6983963	protein_coding	Prdx5	exon	ENSMUSG00000024953	ProperStrand	24	chr1	168239525	168239541	protein_coding	Ildr2	exon	ENSMUSG00000040612	ProperStrand	103	1	-14.0855
chr2	30291143	30293114	protein_coding	Ppp2r4	exon	ENSMUSG00000039515	ProperStrand	76	chr10	90581104	90581194	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	2	-7.2616
chr19	10700391	10700416	protein_coding	Ddb1	exon	ENSMUSG00000024740	ProperStrand	304	chr10	120709244	120712786	protein_coding	Tbc1d30	exon	ENSMUSG00000052302	ProperStrand	233	1	-7.3534
chr9	63868722	63868738	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	chr17	24665420	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-0.9546
chr4	139021351	139023141	protein_coding	Ubr4	exon	ENSMUSG00000066036	ProperStrand	304	chr11	69481386	69481448	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-0.7335
chr2	130109497	130109513	protein_coding	Idh3b	exon	ENSMUSG00000027406	ProperStrand	146	chr2	130101973	130102087	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-3.6634
chr13	84486215	84486236	Low_complexity	GA-rich	Low_complexity	chr13GA-rich84486170	NonProperStrand	1	chr18	35716684	35716761	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-inf
chr6	47876672	47876693	protein_coding	Zfp212	exon	ENSMUSG00000052763	ProperStrand	20	chr8	13876132	13876232	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-9.3574
chr15	85244471	85244492	protein_coding	Atxn10	intron	ENSMUSG00000016541	NonProperStrand	3	chrX	97821660	97821760	protein_coding	Kif4	utr5	ENSMUSG00000034311	ProperStrand	24	1	-inf
chr8	104510035	104510052	LINE	L1_Rod	L1	chr8L1_Rod104509928	NonProperStrand	26	chr16	23110828	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.2392
chr1	32435389	32435462	protein_coding	Khdrbs2	intron	ENSMUSG00000026058	NonProperStrand	4	chr7	29410070	29410087	protein_coding	C330005M16Rik	intron	ENSMUSG00000037469	ProperStrand	23	1	-18.9843
chr11	119304215	119304279	protein_coding	Rnf213	exon	ENSMUSG00000070327	ProperStrand	20	chr11	74718936	74719010	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	1	-11.2502
chr12	77404899	77408239	protein_coding	Mthfd1	exon	ENSMUSG00000021048	ProperStrand	71	chr9	15119649	15119703	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.3421
chr11	97023949	97024727	protein_coding	Kpnb1	exon	ENSMUSG00000001440	ProperStrand	197	chr9	36341688	36341705	protein_coding	Gm5615	utr3	ENSMUSG00000074448	ProperStrand	1	1	-inf
chr4	131908381	131908469	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr4	21922274	21922291	protein_coding-noncoding	6230409E13Rik	utr5	ENSMUSG00000028246	ProperStrand	18	1	-9.6898
chr12	106269284	106269384	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	chr4	41158541	41158579	snoRNA	ENSMUSG00000089308_SNORD121A	.	ENSMUSG00000089308	ProperStrand	209	1	-1.9378
chr2	35301422	35301464	protein_coding	Ggta1	intron	ENSMUSG00000035778	ProperStrand	5	chr7	116664794	116664884	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-7.4478
chr13	9833563	9833670	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr16	30315665	30315698	protein_coding	Atp13a3	utr3	ENSMUSG00000022533	ProperStrand	45	2	-9.0352
chr15	98924269	98924291	protein_coding	Dnajc22	intron	ENSMUSG00000038009	NonProperStrand	10	chr2	158182207	158182280	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	3	-19.3290
chr11	44370850	44370939	protein_coding	Rnf145	exon	ENSMUSG00000019189	ProperStrand	46	chr10	86154394	86154452	protein_coding	Hsp90b1	exon	ENSMUSG00000020048	ProperStrand	396	5	-19.4439
chr6	146552284	146552354	protein_coding	Tm7sf3	exon	ENSMUSG00000040234	ProperStrand	43	chr7	29136631	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-5.1124
chr4	43505803	43505893	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr10	41902538	41902616	protein_coding	Foxo3	utr3	ENSMUSG00000048756	ProperStrand	59	1	-3.1005
chr16	22572859	22572876	protein_coding	Dgkg	intron	ENSMUSG00000022861	NonProperStrand	39	chr8	73419713	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.9253
chr11	106939055	106972249	protein_coding	Bptf	exon	ENSMUSG00000040481	ProperStrand	70	chr7	116664794	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	9	-inf
chr9	70960076	70960093	protein_coding	Aqp9	exon	ENSMUSG00000032204	NonProperStrand	118	chr5	130717173	130717273	protein_coding	0610007L01Rik	utr3	ENSMUSG00000053094	ProperStrand	39	1	-12.8226
chr3	77205707	77205724	LINE	L1Md_F2	L1	chr3L1Md_F277205360	ProperStrand	9	chr6	125136588	125136663	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	1	-10.3039
chr16	84977574	84977590	protein_coding	App	intron	ENSMUSG00000022892	NonProperStrand	101	chr12	60141442	60141480	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-5.8024
chr2	90235287	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	4	-4.7013
chr2	129997641	129998371	protein_coding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	21	chr3	40755217	40755233	protein_coding	Larp1b	intron	ENSMUSG00000037814	ProperStrand	29	1	-16.9636
chr5	124909784	124909819	protein_coding	Setd8	exon	ENSMUSG00000049327	ProperStrand	71	chr3	123210854	123210912	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-5.0728
chr19	43579408	43579425	protein_coding	Got1	intron	ENSMUSG00000025190	NonProperStrand	147	chr7	29136525	29136575	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-2.0164
chr2	32415667	32418946	protein_coding	Fam102a	exon	ENSMUSG00000039157	NonProperStrand	3	chr2	113673021	113673131	protein_coding	Arhgap11a	utr3	ENSMUSG00000041219	ProperStrand	47	1	-inf
chr11	6299884	6300810	protein_coding	Zmiz2	exon	ENSMUSG00000041164	ProperStrand	69	chr11	97642980	97643060	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-3.9945
chr12	110918156	110918221	snoRNA	ENSMUSG00000065749_AF357428	.	ENSMUSG00000065749	ProperStrand	218	chr7	52381719	52381736	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-5.0386
chr3	142351261	142351279	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-1.5634
chr11	108286651	108294071	protein_coding	Ccdc46	utr5	ENSMUSG00000020728	NonProperStrand	10	chr7	29136525	29136579	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.7572
chr6	112689098	112689322	protein_coding	Srgap3	exon	ENSMUSG00000030257	NonProperStrand	208	chr11	106362556	106362635	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	2	-8.1761
chr17	39979984	39980005	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr5	116069808	116070167	protein_coding	Gcn1l1	exon	ENSMUSG00000041638	NonProperStrand	3	1	-13.5799
mmu-miR-290a-5p	1	22	miRNA	mmu-miR-290a-5p	.	mmu-miR-290a-5p	ProperStrand	22	chr7	148634701	148634801	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-5.9356
chr9	15119996	15120076	protein_coding	Taf1d	intron	ENSMUSG00000031939	NonProperStrand	3	chr1	39605594	39605684	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	NonProperStrand	4	2	-inf
chr8	13416896	13416912	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr4	153410349	153410365	protein_coding	Ccdc27	exon	ENSMUSG00000039492	ProperStrand	94	1	-5.5718
chr3	93146491	93146510	LTR	RLTR12B	ERVK	chr3RLTR12B93146284	ProperStrand	1	chr5	108336362	108336428	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-inf
chr7	4745114	4745141	protein_coding	Rpl28	exon	ENSMUSG00000030432	ProperStrand	220	chr8	129468746	129468816	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	3	-5.6765
chr19	42195424	42195514	protein_coding	Pi4k2a	utr3	ENSMUSG00000025178	ProperStrand	23	chr4	149615199	149616260	protein_coding	Eno1	exon	ENSMUSG00000063524	ProperStrand	432	1	-11.2999
chr12	4249228	4249312	protein_coding	Ncoa1	utr3	ENSMUSG00000020647	ProperStrand	38	chr3	68889046	68889136	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-4.1061
chr5	122022153	122022737	protein_coding	Aldh2	exon	ENSMUSG00000029455	ProperStrand	108	chr1	145626106	145626186	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-7.6551
chrX	85999041	85999121	SINE	RSINE1	B4	chrXRSINE185999048	ProperStrand	1	chrX	85999198	85999288	SINE	RSINE1	B4	chrXRSINE185999135	ProperStrand	1	1	-inf
chr18	75528958	75528974	protein_coding	Smad7	exon	ENSMUSG00000025880	ProperStrand	83	chr11	68886928	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-3.5382
chr18	75389747	75389780	protein_coding	Dym	exon	ENSMUSG00000035765	ProperStrand	22	chr14	76247711	76247752	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-10.0008
chr7	56838239	56839423	protein_coding	Nav2	utr3	ENSMUSG00000052512	ProperStrand	106	chr2	26768395	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-4.5012
chr3	153575090	153575175	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	chr4	131865856	131865987	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	12	-2.5710
chr9	78023108	78023220	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chrX	71517822	71517961	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	6	-4.6691
chr11	69805629	69805645	protein_coding-noncoding	Gabarap	utr5	ENSMUSG00000018567	ProperStrand	1	chr17	33665808	33665825	protein_coding	Adamts10	exon	ENSMUSG00000024299	NonProperStrand	1	1	-inf
chr9	48809660	48850047	protein_coding	Usp28	utr3	ENSMUSG00000032267	ProperStrand	63	chr4	131908236	131908318	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	5	-7.6671
chr2	26493366	26493478	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr17	24856619	24856750	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	8	-1.0889
chr19	31005116	31005133	protein_coding	Prkg1	intron	ENSMUSG00000052920	ProperStrand	32	chr11	62416951	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-7.2933
chr19	9052141	9052465	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	chr4	116883455	116883535	snRNA	ENSMUSG00000070237_U5	.	ENSMUSG00000070237	ProperStrand	154	1	-7.5820
chr13	56188684	56188745	protein_coding	H2afy	intron	ENSMUSG00000015937	ProperStrand	103	chr7	150717298	150717364	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-4.4632
chrX	149828130	149828146	protein_coding	Klf8	utr3	ENSMUSG00000041649	NonProperStrand	107	chr5	140918160	140918308	protein_coding	Eif3b	exon	ENSMUSG00000056076	ProperStrand	66	1	-11.9596
chr9	44657353	44657443	protein_coding	Mll1	exon	ENSMUSG00000002028	ProperStrand	151	chr18	35716765	35716845	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-0.8483
chr2	138188029	138188045	protein_coding	Btbd3	intron	ENSMUSG00000062098	NonProperStrand	121	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-4.5085
chr14	15572353	15572371	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr9	110124618	110137430	protein_coding	Smarcc1	exon	ENSMUSG00000032481	ProperStrand	108	1	-10.1031
chr3	153575089	153575167	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	chr2	145076803	145209249	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-3.0921
chr5	141090405	141090422	protein_coding	Lfng	exon	ENSMUSG00000029570	NonProperStrand	92	chr9	59526554	59526584	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	1	-6.3319
chr8	109187860	109188113	protein_coding	Cdh1	exon	ENSMUSG00000000303	ProperStrand	283	chr7	29136603	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-1.4860
chr4	132530098	132530116	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	chr10	110918600	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-1.3388
chr5	74489201	74489291	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr10	75180358	75180377	protein_coding	Cabin1	exon	ENSMUSG00000020196	ProperStrand	62	1	-5.5577
chr8	108228551	108228568	protein_coding	E130303B06Rik	exon	ENSMUSG00000013155	NonProperStrand	6	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-6.1051
chr8	125626949	125627005	snoRNA	ENSMUSG00000064450_Snord68	.	ENSMUSG00000064450	ProperStrand	181	chr17	35089181	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-3.3909
chr15	66800397	66800414	protein_coding	Ndrg1	intron	ENSMUSG00000005125	ProperStrand	35	chr3	108357255	108357310	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-5.5876
chr19	23332023	23332040	protein_coding	Smc5	exon	ENSMUSG00000024943	ProperStrand	146	chr4	86232430	86232488	snoRNA	ENSMUSG00000088958_Scarna8	.	ENSMUSG00000088958	ProperStrand	366	1	-7.9131
chr8	121070498	121070517	protein_coding	Cdh13	intron	ENSMUSG00000031841	ProperStrand	60	chr17	35089181	35089225	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-5.4852
chr19	5104985	5105108	protein_coding	Rab1b	intron	ENSMUSG00000024870	ProperStrand	133	chr16	23110874	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	7	-1.7048
chr4	120234108	120235413	protein_coding	Ctps	exon	ENSMUSG00000028633	ProperStrand	19	chr11	97642949	97643039	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-11.1238
chr6	39355609	39355720	protein_coding	Mkrn1	utr3	ENSMUSG00000029922	ProperStrand	177	chr2	145077955	145209255	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	5	-24.5763
chr4	126559848	126566767	protein_coding	Zmym4	exon	ENSMUSG00000042446	ProperStrand	94	chr17	24857727	24857777	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.5840
chr4	143748332	143749010	protein_coding	Oog3	exon	ENSMUSG00000050810	NonProperStrand	78	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.3778
chr17	71824483	71824507	protein_coding	Smchd1	utr5	ENSMUSG00000024054	ProperStrand	79	chr4	131908689	131908806	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.8739
chr12	74209825	74209915	protein_coding	Six4	exon	ENSMUSG00000034460	ProperStrand	33	chr7	118219659	118219739	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-5.3243
chr19	46385239	46385264	protein_coding	Nfkb2	exon	ENSMUSG00000025225	ProperStrand	12	chr8	73419657	73419712	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-10.2408
chr6	83059830	83059847	protein_coding	Mrpl53	utr3	ENSMUSG00000030037	ProperStrand	13	chr2	158182191	158182281	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	2	-12.9634
chr7	74904050	74904140	protein_coding	Synm	exon	ENSMUSG00000030554	ProperStrand	15	chr8	98269985	98270065	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-8.3205
chr6	115755584	115757184	protein_coding	Rpl32	exon	ENSMUSG00000057841	ProperStrand	137	chr6	71832550	71832628	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	2	-6.7514
chr13	23673676	23673776	protein_coding	Hist1h4d	exon	ENSMUSG00000061482	ProperStrand	57	chr1	162965570	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.3697
chr3	94247301	94247325	protein_coding	Mrpl9	exon	ENSMUSG00000028140	ProperStrand	4	chr5	99443584	99443601	protein_coding	Prkg2	intron	ENSMUSG00000029334	NonProperStrand	57	1	-18.7243
chr5	93600376	93600466	protein_coding	Sept11	utr3	ENSMUSG00000058013	ProperStrand	79	chr15	34370545	34370625	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-3.0491
chr8	75782974	75782992	protein_coding	Large	intron	ENSMUSG00000004383	ProperStrand	48	chr15	79908931	79908984	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-5.9105
chr2	119627454	119627496	protein_coding	Tyro3	intron	ENSMUSG00000027298	ProperStrand	35	chr4	134926614	134927796	protein_coding	A330049M08Rik	exon	ENSMUSG00000043924	ProperStrand	130	2	-19.7912
chr1	40053934	40053951	protein_coding	Map4k4	exon	ENSMUSG00000026074	ProperStrand	348	chr6	86222498	86222531	protein_coding	Tgfa	utr3	ENSMUSG00000029999	ProperStrand	5	1	-14.9387
chr16	17354146	17354212	protein_coding	Pi4ka	exon	ENSMUSG00000041720	ProperStrand	39	chr16	23110964	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-3.8618
chr5	122691914	122691930	protein_coding	Hvcn1	utr3	ENSMUSG00000064267	ProperStrand	182	chr8	73419713	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-1.3238
chr11	95820564	95820620	protein_coding	Igf2bp1	utr3	ENSMUSG00000013415	ProperStrand	140	chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	1	-6.4272
chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	chr8	107139980	107139996	protein_coding	Cdh16	exon	ENSMUSG00000031881	NonProperStrand	8	1	-13.3446
chr2	148969367	148969384	LINE	Lx3_Mus	L1	chr2Lx3_Mus148968627	ProperStrand	8	chr10	62228338	62228388	snoRNA	ENSMUSG00000080469_Snord98	.	ENSMUSG00000080469	ProperStrand	124	1	-16.0008
chr10	120288388	120288407	protein_coding	Msrb3	intron	ENSMUSG00000051236	ProperStrand	24	chrX	84483699	84483721	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-10.0981
chr11	63587593	63587612	LTR	RMER15	ERVL	chr11RMER1563587532	NonProperStrand	1	chr6	29539099	29539124	protein_coding	Tnpo3	exon	ENSMUSG00000012535	ProperStrand	58	1	-inf
chr8	98399752	98401680	protein_coding	Got2	exon	ENSMUSG00000031672	ProperStrand	85	chr19	9047581	9051830	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	1	-8.7663
chrX	11635848	11635865	protein_coding	Bcor	exon	ENSMUSG00000040363	NonProperStrand	293	chr1	87983948	87983971	snoRNA	ENSMUSG00000077274_SNORA26	.	ENSMUSG00000077274	ProperStrand	361	1	-6.5618
chr12	114290175	114290191	protein_coding	Pacs2	intron	ENSMUSG00000021143	NonProperStrand	302	chr11	106362605	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	2	-7.0944
chr7	29136522	29136655	protein_coding	Rps16	intron	ENSMUSG00000037563	ProperStrand	191	chr19	8963038	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-1.3867
chr4	25724874	25724892	protein_coding-noncoding	Fut9	utr3	ENSMUSG00000055373	ProperStrand	2	chr3	123210907	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-9.1566
chr5	100855944	100855974	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr4	126559848	126566767	protein_coding	Zmym4	exon	ENSMUSG00000042446	ProperStrand	94	2	-9.3787
chr3	32857771	32891914	protein_coding	Pex5l	exon	ENSMUSG00000027674	ProperStrand	52	chr11	77996560	77996606	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-6.3747
chr1	191697044	191697093	protein_coding	Ptpn14	utr3	ENSMUSG00000026604	ProperStrand	74	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-6.5671
chr7	54584534	54584614	LINE	L1Md_F2	L1	chr7L1Md_F254581361	ProperStrand	2	chr17	35299507	35299597	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	2	-inf
chr1	152231432	152231449	protein_coding-noncoding	BC003331	utr3	ENSMUSG00000006010	NonProperStrand	6	chr7	150717368	150717425	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-10.2214
chr1	88247240	88247455	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chr10	62273845	62273888	protein_coding	Tet1	utr3	ENSMUSG00000047146	ProperStrand	286	1	-4.3112
chr2	29594752	29594842	protein_coding	Rapgef1	utr3	ENSMUSG00000039844	ProperStrand	58	chr5	108334191	108334271	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	2	-8.0743
chr13	94211421	94211521	protein_coding	Jmy	exon	ENSMUSG00000021690	ProperStrand	16	chr18	35716831	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.5854
chr14	12288161	12288251	LINE	L1_Mur2	L1	chr14L1_Mur212288135	NonProperStrand	1	chr14	12287790	12287880	LTR	RLTR25B	ERVK	chr14RLTR25B12287172	ProperStrand	1	1	-inf
chr4	75094306	75094322	LINE	Lx9	L1	chr4Lx975094037	ProperStrand	41	chr11	62416579	62416630	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-5.9124
chr7	52309977	52309993	protein_coding	Prrg2	exon	ENSMUSG00000007837	NonProperStrand	281	chr7	104548739	104548770	protein_coding	Ndufc2	exon	ENSMUSG00000030647	ProperStrand	10	1	-13.8832
chr11	57857445	57874957	protein_coding	Larp1	utr3	ENSMUSG00000037331	ProperStrand	201	chr4	131908686	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	9	-5.5718
chr18	42389781	42389862	protein_coding	Lars	intron	ENSMUSG00000024493	ProperStrand	69	chr5	130300483	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	5	-10.8900
chr7	51750231	51750247	protein_coding	2310044H10Rik	exon	ENSMUSG00000008140	ProperStrand	14	chr1	80575190	80575206	protein_coding	Dock10	utr3	ENSMUSG00000038608	ProperStrand	6	1	-20.8732
chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr12	17552948	17553087	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	6	-2.5880
chr11	102294588	102294613	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr11	69483136	69483264	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	9	-4.1618
chr4	139204177	139204271	protein_coding	Aldh4a1	utr3	ENSMUSG00000028737	ProperStrand	20	chr16	23110988	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.6223
chr8	98244224	98267120	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	chr18	35714162	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	3	-2.8021
chr2	130103751	130103812	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	chr7	29136540	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	9	-2.6711
chr11	60013564	60013608	protein_coding	Srebf1	exon	ENSMUSG00000020538	ProperStrand	24	chr5	121655063	121655153	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-9.0624
chr9	111063909	111063999	protein_coding	Lrrfip2	intron	ENSMUSG00000032497	ProperStrand	28	chr3	68889060	68889140	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-4.6927
chr6	82229938	82230028	LTR	MTB	MaLR	chr6MTB82229831	ProperStrand	1	chr10	122313613	122313693	protein_coding	Ppm1h	intron	ENSMUSG00000034613	ProperStrand	51	1	-inf
chr7	53687407	53687423	protein_coding	Kcnc1	utr3	ENSMUSG00000058975	NonProperStrand	14	chr16	23110840	23110948	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-11.4341
chrX	71560598	71560644	protein_coding-noncoding	Fam50a	utr5	ENSMUSG00000001962	ProperStrand	1	chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	1	-inf
chr7	6090776	6090866	protein_coding	Zfp787	intron	ENSMUSG00000046792	ProperStrand	16	chr1	39605615	39605695	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-10.0172
chr2	90235294	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	4299367	4302483	protein_coding	Aasdhppt	exon	ENSMUSG00000025894	ProperStrand	121	1	-3.1584
chr17	65962575	65962592	protein_coding	Vapa	exon	ENSMUSG00000024091	NonProperStrand	7	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-12.1558
chr1	59749357	59749429	snoRNA	ENSMUSG00000077358_SNORD70	.	ENSMUSG00000077358	ProperStrand	63	chr12	106269289	106269437	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	2	-6.7986
chr6	85416056	85416650	protein_coding	Cct7	exon	ENSMUSG00000030007	ProperStrand	173	chr9	120039581	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.5465
chr9	44156211	44156305	protein_coding	Vps11	utr3	ENSMUSG00000032127	ProperStrand	19	chr15	79908957	79909021	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	2	-12.4786
chr9	63648284	63648374	Other	RMER1B	Other	chr9RMER1B63647834	NonProperStrand	1	chr17	71533171	71533187	protein_coding	Lpin2	intron	ENSMUSG00000024052	ProperStrand	18	1	-inf
chr19	8963082	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	chr12	92811905	92812014	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	12	-5.0199
chr7	16858044	16858061	protein_coding	Prr24	utr3	ENSMUSG00000091811	ProperStrand	8	chr16	38158146	38158227	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	1	-12.7845
chr4	151368118	151369942	protein_coding	Phf13	exon	ENSMUSG00000047777	ProperStrand	38	chr16	23111751	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.6668
chr17	22274461	22274480	LTR	RLTR1B-int	ERV1	chr17RLTR1B-int22274032	NonProperStrand	9	chr17	24207416	24207548	protein_coding	Kctd5	intron	ENSMUSG00000016946	ProperStrand	17	2	-20.4620
chr8	126491969	126491989	protein_coding	Gm20388	intron	ENSMUSG00000092329	ProperStrand	295	chr15	98350146	98350246	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	2	-3.4624
chr4	132089295	132089431	protein_coding	Atpif1	exon	ENSMUSG00000054428	ProperStrand	15	chr17	24857728	24857801	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-8.1155
chr5	5557290	5557346	protein_coding	Gtpbp10	exon	ENSMUSG00000040464	ProperStrand	6	chr1	59749369	59749428	snoRNA	ENSMUSG00000077358_SNORD70	.	ENSMUSG00000077358	ProperStrand	63	2	-19.7911
chr15	78259253	78259269	protein_coding	Kctd17	exon	ENSMUSG00000033287	NonProperStrand	26	chr8	64017612	64028375	protein_coding	Palld	exon	ENSMUSG00000058056	NonProperStrand	125	1	-13.5299
chr19	61070964	61070981	protein_coding	Grk5	intron	ENSMUSG00000003228	ProperStrand	12	chr10	127562579	127562629	protein_coding	Baz2a	exon	ENSMUSG00000040054	ProperStrand	274	1	-13.5512
chr2	32970749	32970766	protein_coding	Garnl3	intron	ENSMUSG00000038860	NonProperStrand	54	chr2	158185530	158185622	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-6.6948
chr10	79499319	79499540	protein_coding	Polr2e	exon	ENSMUSG00000004667	NonProperStrand	1	chr16	23111373	23111473	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	NonProperStrand	38	1	-inf
chr17	17975208	17975225	protein_coding	Ncrna00085	intron	ENSMUSG00000080316	ProperStrand	2	chr13	96100553	96100595	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	1	-15.5348
chr16	23111413	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	NonProperStrand	38	chr2	26768049	26768097	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	NonProperStrand	4	1	-20.3224
chr8	74069725	74069818	protein_coding	Fam125a	intron	ENSMUSG00000031813	ProperStrand	14	chr15	79913288	79913306	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	3	-14.9511
chr5	29895932	29895951	protein_coding	Ube3c	utr5	ENSMUSG00000039000	ProperStrand	48	chrX	138159145	138159161	protein_coding	Irs4	exon	ENSMUSG00000054667	NonProperStrand	98	1	-12.7771
chr15	31226074	31226090	protein_coding	Ankrd33b	utr3	ENSMUSG00000022237	ProperStrand	55	chr2	22149142	22149159	protein_coding	Myo3a	utr5	ENSMUSG00000025716	ProperStrand	30	1	-14.8973
chr8	69413066	69413117	protein_coding	Naf1	exon	ENSMUSG00000014907	ProperStrand	104	chr10	23505190	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-1.2547
chrX	148358031	148358131	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	chrX	71517910	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-2.5498
chr16	18283302	18283319	protein_coding	Dgcr8	exon	ENSMUSG00000022718	ProperStrand	67	chr1	91358413	91358430	protein_coding	Agap1	intron	ENSMUSG00000055013	ProperStrand	229	1	-10.4056
chr1	78667604	78667643	protein_coding	Acsl3	intron	ENSMUSG00000032883	ProperStrand	8	chr1	162967506	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-7.4644
chr18	20123591	20123608	protein_coding	Dsc3	intron	ENSMUSG00000059898	ProperStrand	31	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.8751
chr3	9603146	9603236	protein_coding	Zfp704	intron	ENSMUSG00000040209	NonProperStrand	8	chr18	33954855	33954935	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-7.4981
chr4	75636628	75636645	protein_coding	Ptprd	intron	ENSMUSG00000028399	NonProperStrand	29	chr6	39349278	39349330	protein_coding	Mkrn1	exon	ENSMUSG00000029922	ProperStrand	177	1	-12.6142
chr5	115939521	115939614	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr19	8963027	8963178	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	15	-4.5271
chr2	90235290	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	121332493	121332510	protein_coding	Wdr76	utr5	ENSMUSG00000027242	NonProperStrand	2	1	-11.8388
chr6	122683086	122683125	protein_coding-noncoding	Slc2a3	utr3	ENSMUSG00000003153	ProperStrand	5	chr4	131908801	131908891	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-14.4653
chr5	112865457	112865476	protein_coding	Sez6l	exon	ENSMUSG00000058153	ProperStrand	81	chr4	131865883	131865981	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.3246
chr5	138607191	138607281	protein_coding	Mcm7	exon	ENSMUSG00000029730	ProperStrand	258	chr14	33005156	33005236	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	3	-4.3606
chr10	126736350	126736440	protein_coding	Mars	exon	ENSMUSG00000040354	ProperStrand	38	chr11	55296215	55296295	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-7.0872
chr8	18132734	18132824	LTR	ORR1E	MaLR	chr8ORR1E18132685	ProperStrand	1	chr8	18133010	18133090	Simple_repeat	(GGA)n	Simple_repeat	chr8(GGA)n18132959	NonProperStrand	1	1	-inf
chr1	183949812	183949902	protein_coding	Enah	utr5	ENSMUSG00000022995	ProperStrand	196	chr2	130454356	130455716	protein_coding	Ubox5	utr5	ENSMUSG00000027300	ProperStrand	5	1	-16.1175
chr1	160866418	160866435	protein_coding	Pappa2	exon	ENSMUSG00000073530	NonProperStrand	4	chr16	23111448	23111503	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-6.3168
chr3	85942714	85942730	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	chr18	33954843	33954943	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-0.7295
chr7	129311144	129311220	protein_coding	Plk1	exon	ENSMUSG00000030867	ProperStrand	146	chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	1	-8.0536
chr9	21562079	21562192	protein_coding	Spc24	intron	ENSMUSG00000074476	ProperStrand	19	chr4	131865957	131865988	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	6	-20.5720
chr14	52816779	52816795	protein_coding	Supt16h	exon	ENSMUSG00000035726	ProperStrand	193	chr12	110874223	110874276	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	1	-7.6438
chr8	109189405	109190132	protein_coding	Cdh1	exon	ENSMUSG00000000303	ProperStrand	283	chr14	52856919	52857010	protein_coding	Chd8	exon	ENSMUSG00000053754	ProperStrand	167	1	-8.1566
chr8	108247046	108247136	protein_coding	Gfod2	intron	ENSMUSG00000013150	NonProperStrand	3	chr8	108413304	108413394	protein_coding	Edc4	exon	ENSMUSG00000036270	NonProperStrand	1	1	-inf
chr2	130107504	130107607	protein_coding	Idh3b	exon	ENSMUSG00000027406	ProperStrand	146	chr4	48231061	48232297	protein_coding	Erp44	exon	ENSMUSG00000028343	ProperStrand	2	1	-inf
chr7	117189863	117189938	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr1	172975116	172975189	tRNA	tRNA699-GlyGCC	.	522526	ProperStrand	660	1	-1.8190
chrX	45721612	45721669	protein_coding	Bcorl1	exon	ENSMUSG00000036959	ProperStrand	36	chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	1	-9.7913
chr11	30049933	30049978	protein_coding	Spnb2	exon	ENSMUSG00000020315	ProperStrand	103	chr2	26493366	26493473	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-2.7649
chr16	3627753	3627770	LTR	IAPEY3-int	ERVK	chr16IAPEY3-int3625351	ProperStrand	8	chr1	63225253	63225322	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	1	-12.9723
chr14	68742061	68742077	protein_coding	Nefm	exon	ENSMUSG00000022054	ProperStrand	10	chr5	108336363	108336412	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-8.4814
chr2	90235312	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	106040860	106040877	protein_coding	Lrrc8c	utr3	ENSMUSG00000054720	NonProperStrand	12	1	-7.6663
chrX	68675503	68675598	protein_coding	Cd99l2	utr3	ENSMUSG00000035776	ProperStrand	16	chr2	22444274	22444305	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-10.4532
chr11	53213315	53213415	protein_coding	Aff4	exon	ENSMUSG00000049470	ProperStrand	94	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-4.1085
chr15	77597977	77605073	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr16	23110454	23110563	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	4	-0.7132
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr2	180465836	180465891	protein_coding	Slc17a9	intron	ENSMUSG00000023393	ProperStrand	7	1	-12.7375
chr6	97095258	97095275	protein_coding	A130022J15Rik	exon	ENSMUSG00000035245	ProperStrand	4	chr7	148634765	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-9.5448
chr15	76019380	76019398	protein_coding	Plec	exon	ENSMUSG00000022565	ProperStrand	186	chr17	23945117	23945410	protein_coding	Srrm2	utr5	ENSMUSG00000039218	ProperStrand	521	5	-inf
chr7	26131732	26132343	protein_coding	Megf8	exon	ENSMUSG00000045039	ProperStrand	100	chr2	26494747	26494827	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.2224
chr2	157614748	157614838	protein_coding	Ctnnbl1	exon	ENSMUSG00000027649	ProperStrand	26	chr13	51743567	51743647	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-8.5373
chr19	44380310	44380373	protein_coding	Scd2	utr3	ENSMUSG00000025203	ProperStrand	219	chr4	139295481	139295497	protein_coding	Pax7	utr3	ENSMUSG00000028736	ProperStrand	23	1	-12.6578
chr11	102294590	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr3	153575089	153575167	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	2	-6.9711
chr11	99076449	99076465	protein_coding	Smarce1	exon	ENSMUSG00000037935	NonProperStrand	8	chr4	126197549	126203253	protein_coding	Eif2c4	exon	ENSMUSG00000042500	ProperStrand	2	1	-26.0014
chr2	90235292	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chrX	7752870	7752886	protein_coding	Tbc1d25	exon	ENSMUSG00000039201	ProperStrand	126	4	-10.5531
chr9	78023109	78023179	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr5	108336363	108336457	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	10	-3.7736
chr4	135846171	135846187	protein_coding	Zfp46	exon	ENSMUSG00000051351	NonProperStrand	85	chr3	123210929	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-2.8546
chr15	102260581	102261239	protein_coding	Sp1	exon	ENSMUSG00000001280	ProperStrand	124	chr2	26494711	26494791	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.8752
chr16	95924165	95924181	protein_coding	Ets2	utr5	ENSMUSG00000022895	NonProperStrand	1	chr19	8798484	8798550	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-inf
chr14	80261855	80261923	lincRNA	Gm6999	intron	ENSMUSG00000075495	ProperStrand	265	chr18	35714145	35714235	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-1.0533
chr7	55423413	55423513	protein_coding	Mrgprb5	exon	ENSMUSG00000070551	NonProperStrand	1	chr15	90060156	90060173	protein_coding	Alg10b	utr3	ENSMUSG00000075470	ProperStrand	15	1	-inf
chr5	32366238	32366257	protein_coding	Bre	intron	ENSMUSG00000052139	ProperStrand	33	chr3	68889135	68889216	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-4.3755
chr1	157405605	157472033	protein_coding	Acbd6	utr5	ENSMUSG00000033701	ProperStrand	10	chr16	23111381	23111461	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-10.9079
chr9	44918660	44918676	protein_coding	Gm10684	utr5	ENSMUSG00000074385	ProperStrand	17	chr12	110887828	110887892	snoRNA	ENSMUSG00000084549_SNORD113	.	ENSMUSG00000084549	ProperStrand	196	1	-13.5052
chr7	29524945	29524992	protein_coding	Mrps12	exon	ENSMUSG00000045948	ProperStrand	2	chr16	23111741	23111775	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-8.9529
chr2	153050783	153050799	protein_coding	Tspyl3	exon	ENSMUSG00000074671	ProperStrand	228	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-3.3282
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr17	27110157	27110173	protein_coding	Zbtb9	utr5	ENSMUSG00000079605	ProperStrand	16	1	-10.4162
chr4	126708597	126708646	protein_coding	Sfpq	intron	ENSMUSG00000028820	ProperStrand	340	chr11	97642965	97643074	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	5	-2.8312
chr16	20683975	20684114	protein_coding	Eif4g1	exon	ENSMUSG00000045983	ProperStrand	199	chr1	162966002	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-2.9183
chr9	96979170	96979189	protein_coding	Slc25a36	utr3	ENSMUSG00000032449	ProperStrand	159	chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	1	-7.2441
chr2	75501664	75501692	protein_coding	Hnrnpa3	exon	ENSMUSG00000059005	ProperStrand	289	chr11	67182895	67184426	protein_coding	Myh13	exon	ENSMUSG00000060180	ProperStrand	145	1	-8.3961
chr2	68583602	68583619	protein_coding	4932414N04Rik	exon	ENSMUSG00000079324	ProperStrand	7	chr9	15118259	15118283	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-7.7405
chr2	125389949	125389966	protein_coding	Cep152	exon	ENSMUSG00000068394	ProperStrand	60	chr9	120037898	120037985	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-4.7058
chr9	120039584	120039684	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	chrX	143918835	143918902	snoRNA	ENSMUSG00000084421_SNORA35	.	ENSMUSG00000084421	ProperStrand	293	1	-0.8481
chr9	20756337	20756355	protein_coding	Dnmt1	intron	ENSMUSG00000004099	ProperStrand	91	chr7	4379326	4382001	protein_coding	Rdh13	exon	ENSMUSG00000008435	ProperStrand	5	1	-17.5402
chr9	120039571	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	chr3	153574574	153574654	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	4	-3.2544
chr7	19941793	19941834	protein_coding	Ercc1	utr3	ENSMUSG00000003549	ProperStrand	2	chr7	118219574	118219690	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-11.5289
chr19	41948234	41948281	protein_coding	Rrp12	exon	ENSMUSG00000035049	ProperStrand	106	chr6	71832629	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	3	-10.7687
chr7	88895801	88895881	LINE	Lx9	L1	chr7Lx988895193	NonProperStrand	1	chr7	88895508	88895598	LINE	Lx9	L1	chr7Lx988895193	ProperStrand	1	1	-inf
chr15	76734771	76734851	protein_coding	Rpl8	exon	ENSMUSG00000003970	ProperStrand	191	chr11	69483136	69483226	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-0.7724
chr2	103606231	103606254	protein_coding	Caprin1	utr3	ENSMUSG00000027184	ProperStrand	145	chr9	15118326	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-1.9419
chrX	72214248	72214264	protein_coding-noncoding	Gab3	utr3	ENSMUSG00000032750	ProperStrand	420	chr17	24665465	24665491	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-1.5152
chr1	36161856	36161942	protein_coding	Hs6st1	utr3	ENSMUSG00000045216	ProperStrand	63	chr2	26494762	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	5	-13.3542
chr2	32818883	32818934	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	chr11	106362673	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	2	-1.2745
chr2	60072751	60072801	protein_coding	March7	exon	ENSMUSG00000026977	ProperStrand	8	chr9	78326866	78326971	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	4	-20.1862
chr2	179322379	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr1	39605591	39605696	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-5.2832
chr9	109987503	109987694	protein_coding	Dhx30	exon	ENSMUSG00000032480	ProperStrand	29	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.9774
chr4	117780297	117807024	protein_coding	St3gal3	utr5	ENSMUSG00000028538	NonProperStrand	6	chr4	140121137	140121153	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	1	-16.3503
chr13	74464456	74464700	protein_coding	Sdha	exon	ENSMUSG00000021577	ProperStrand	70	chr2	130101972	130102052	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	4	-15.6933
chr5	65665655	65666656	protein_coding	Rfc1	exon	ENSMUSG00000029191	ProperStrand	53	chr5	74489594	74489674	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	5	-16.5300
chr7	107954217	107954307	protein_coding	Fam168a	intron	ENSMUSG00000029461	ProperStrand	14	chr7	107792521	107792611	protein_coding	Plekhb1	utr3	ENSMUSG00000030701	NonProperStrand	3	1	-inf
chr13	54653936	54654036	protein_coding	4833439L19Rik	utr3	ENSMUSG00000025871	ProperStrand	14	chr11	62416635	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-8.0774
chr19	5796770	5796811	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	1	-3.2405
chr17	46384630	46384710	protein_coding-noncoding	Polr1c	utr3	ENSMUSG00000067148	NonProperStrand	1	chr17	46384939	46385029	protein_coding	Polr1c	utr5	ENSMUSG00000067148	NonProperStrand	1	1	-inf
chr12	17552938	17553092	protein_coding	Odc1	intron	ENSMUSG00000011179	ProperStrand	173	chr2	26768392	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	2	-6.0727
chr1	84724862	84727142	protein_coding	Trip12	exon	ENSMUSG00000026219	ProperStrand	248	chr15	98350187	98350253	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	3	-5.8956
chr10	62021961	62022061	protein_coding	2510003E04Rik	exon	ENSMUSG00000036955	ProperStrand	8	chr1	162967532	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-7.4644
chr15	58768997	58770866	protein_coding	Ndufb9	exon	ENSMUSG00000022354	ProperStrand	13	chr18	35714252	35714290	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	4	-inf
chr2	90235285	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	103950068	103950086	protein_coding	Uba5	intron	ENSMUSG00000032557	ProperStrand	111	2	-5.6640
chr17	25041749	25041852	protein_coding	Mapk8ip3	exon	ENSMUSG00000024163	NonProperStrand	6	chr4	131865867	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-6.1051
chr9	78023109	78023162	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr1	20552543	20552559	protein_coding	Pkhd1	exon	ENSMUSG00000043760	NonProperStrand	49	1	-6.2773
chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	chr5	108336379	108336409	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-1.3077
chr13	76522485	76522501	protein_coding	Mctp1	exon	ENSMUSG00000021596	NonProperStrand	13	chr18	73693107	73693137	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-8.5978
chr4	131865855	131865930	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr12	60235133	60235180	snoRNA	ENSMUSG00000077505_SNORA26	.	ENSMUSG00000077505	ProperStrand	82	3	-3.9498
chr18	32953962	32953978	lincRNA	4930455D15Rik	intron	ENSMUSG00000085056	NonProperStrand	3	chr4	129662259	129662276	protein_coding	Bai2	utr5	ENSMUSG00000028782	ProperStrand	119	1	-18.6125
chr11	95910558	95910613	protein_coding	Ube2z	utr3	ENSMUSG00000014349	ProperStrand	41	chr16	57391761	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	1	-8.5564
chr14	73995332	73995422	protein_coding	Sucla2	utr3	ENSMUSG00000022110	ProperStrand	20	chr11	97642976	97643085	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	4	-14.5693
chrX	23163178	23163268	LINE	L1Md_A	L1	chrXL1Md_A23159738	ProperStrand	1	chr7	54443522	54443612	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-inf
chr2	120996749	120996766	protein_coding	Tubgcp4	intron	ENSMUSG00000027263	ProperStrand	30	chr7	116663710	116663758	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-6.3873
chr9	58884070	58884086	protein_coding	Neo1	utr5	ENSMUSG00000032340	ProperStrand	35	chr11	55296195	55296277	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-7.2518
chr9	119536351	119539207	protein_coding	Scn10a	exon	ENSMUSG00000034533	ProperStrand	37	chr19	8799022	8799052	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-6.7899
chr1	71656147	71656223	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr5	118343940	118345856	protein_coding	Nos1	exon	ENSMUSG00000029361	ProperStrand	11	1	-11.2887
chr5	124189683	124190701	protein_coding	Rsrc2	exon	ENSMUSG00000029422	ProperStrand	17	chr2	158182201	158182291	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-7.5108
chr17	88079154	88079214	protein_coding	Msh2	exon	ENSMUSG00000024151	ProperStrand	124	chrX	34622930	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-1.9316
chr5	31099390	31099490	protein_coding	Dpysl5	utr3	ENSMUSG00000029168	ProperStrand	27	chr1	172975137	172975189	tRNA	tRNA699-GlyGCC	.	36679	ProperStrand	660	11	-inf
chr12	83071144	83071161	protein_coding	Pcnx	intron	ENSMUSG00000021140	ProperStrand	32	chr17	39985296	39985337	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-7.1810
chr16	91636319	91636386	protein_coding	Gart	exon	ENSMUSG00000022962	ProperStrand	200	chr11	55296238	55296328	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-3.8621
chr3	88684243	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr18	35716685	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	16	-2.2209
chr10	117127384	117127474	protein_coding	Mdm2	exon	ENSMUSG00000020184	ProperStrand	17	chr10	23505154	23505234	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.3129
chr8	122129036	122129052	protein_coding	Taf1c	utr5	ENSMUSG00000031832	ProperStrand	26	chr1	42936992	42937010	protein_coding	Mrps9	intron	ENSMUSG00000060679	ProperStrand	26	1	-16.6563
chr9	46735235	46735251	SINE	ID_B1	B4	chr9ID_B146735180	NonProperStrand	1	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr12	53072271	53072287	protein_coding	Heatr5a	utr5	ENSMUSG00000035181	NonProperStrand	22	chr11	62418013	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-7.5551
chr16	15624441	15624460	protein_coding	Mcm4	utr3	ENSMUSG00000022673	ProperStrand	51	chr6	29326103	29326203	protein_coding	Calu	utr3	ENSMUSG00000029767	ProperStrand	47	1	-14.1433
chr19	59064715	59064732	protein_coding	4930506M07Rik	exon	ENSMUSG00000041362	ProperStrand	36	chr8	129468800	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-5.4030
chr6	116084380	116088217	protein_coding	Tmcc1	utr5	ENSMUSG00000030126	NonProperStrand	6	chr16	23110980	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	NonProperStrand	93	1	-17.0255
chr18	10052131	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chrX	34622926	34623010	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	3	-0.9876
chr13	75747131	75747221	LINE	L1Md_F	L1	chr13L1Md_F75745611	NonProperStrand	1	chr4	71652693	71652773	lincRNA	Gm11234	intron	ENSMUSG00000086696	ProperStrand	2	1	-inf
chr13	8890505	8890595	protein_coding	Idi1	utr3	ENSMUSG00000058258	ProperStrand	21	chr2	53554556	53554636	pseudogene	Gm13502	.	ENSMUSG00000083287	ProperStrand	2	2	-inf
chr18	73693110	73693146	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr8	113362430	113362494	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	4	-7.1627
chr17	48531212	48531256	protein_coding	Nfya	exon	ENSMUSG00000023994	ProperStrand	4	chr1	162966007	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-9.1328
chr12	17798449	17798549	protein_coding	Hpcal1	utr3	ENSMUSG00000071379	ProperStrand	51	chr10	23505152	23505218	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.4625
chr7	52425590	52425616	protein_coding	Slc17a7	exon	ENSMUSG00000070570	ProperStrand	3	chr16	23110909	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-9.5778
chr6	117857401	117857441	protein_coding	Hnrnpf	intron	ENSMUSG00000042079	ProperStrand	147	chr18	35102297	35102324	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-4.8394
chr8	108160538	108167423	protein_coding	Ctcf	utr5	ENSMUSG00000005698	ProperStrand	75	chr19	8800364	8800444	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-3.1235
chr17	23958405	23958505	protein_coding	Srrm2	utr3	ENSMUSG00000039218	ProperStrand	521	chr17	35089181	35089237	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	2	-2.9853
chr11	69483136	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	chr4	132394364	132394454	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	7	-3.0619
chr6	72548579	72548596	protein_coding	Retsat	utr5	ENSMUSG00000056666	ProperStrand	12	chr18	35714142	35714232	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-6.5851
chr11	106242122	106242138	protein_coding	Icam2	exon	ENSMUSG00000001029	NonProperStrand	1	chr9	15118518	15118586	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	1	-inf
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr9	15119968	15120042	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-2.7599
chr15	34370543	34370562	protein_coding-noncoding	Rpl30	utr3	ENSMUSG00000058600	ProperStrand	30	chr6	122681612	122682463	protein_coding	Slc2a3	exon	ENSMUSG00000003153	ProperStrand	682	1	-9.8475
chr7	148333005	148333026	protein_coding	Ptdss2	exon	ENSMUSG00000025495	ProperStrand	29	chr13	30338190	30338207	protein_coding	Mboat1	utr3	ENSMUSG00000038732	NonProperStrand	148	1	-12.9716
chr11	69481804	69481954	protein_coding	Eif4a1	exon	ENSMUSG00000059796	ProperStrand	108	chr12	44844126	44844156	snoRNA	ENSMUSG00000065004_SNORA33	.	ENSMUSG00000065004	ProperStrand	111	1	-10.8970
chr3	88497865	88497955	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	chr17	35088971	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-0.8488
chr4	131908356	131908476	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr7	149170854	149171339	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	2	-8.5879
chr8	115602806	115602896	LINE	Lx5	L1	chr8Lx5115602753	ProperStrand	1	chr8	115602358	115602438	LTR	ORR1B1-int	MaLR	chr8ORR1B1-int115601609	NonProperStrand	1	1	-inf
chr19	44481932	44482022	protein_coding	Scd1	utr5	ENSMUSG00000037071	ProperStrand	32	chr11	78149127	78150260	protein_coding	Pigs	exon	ENSMUSG00000041958	ProperStrand	31	6	-18.8819
chr2	25300351	25300408	protein_coding	Abca2	exon	ENSMUSG00000026944	ProperStrand	57	chr4	131866155	131866245	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-3.7605
chr18	41356147	41356185	miRNA	Mir5097	dead	ENSMUSG00000093361	ProperStrand	221	chr3	88155225	88155263	protein_coding	Smg5	exon	ENSMUSG00000001415	ProperStrand	70	2	-16.3551
chr5	87765652	87765669	protein_coding	Ugt2a3	exon	ENSMUSG00000035780	NonProperStrand	4	chr8	73419657	73419731	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-8.6136
chr2	174156209	174156226	protein_coding	AL593857.1	intron	ENSMUSG00000090625	ProperStrand	13	chr1	162968441	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-9.1648
chr17	75011426	75011469	protein_coding	Birc6	exon	ENSMUSG00000024073	ProperStrand	110	chr14	63287588	63287614	protein_coding	Serpine3	intron	ENSMUSG00000091155	ProperStrand	210	1	-9.5845
chr9	61761173	61761232	protein_coding	Rplp1	exon	ENSMUSG00000007892	ProperStrand	116	chr4	131865884	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-2.8645
chr4	42997435	43003729	protein_coding	Vcp	exon	ENSMUSG00000028452	ProperStrand	108	chr1	162965539	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-6.0470
chr4	57958066	57958082	protein_coding	Txn1	exon	ENSMUSG00000028367	ProperStrand	31	chr19	8799022	8799079	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-7.1438
chr15	73416617	73416633	protein_coding	Slc45a4	exon	ENSMUSG00000079020	ProperStrand	127	chr9	15119287	15119353	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-3.6845
chr15	98781636	98781716	protein_coding	Tuba1a	exon	ENSMUSG00000072235	ProperStrand	17	chr2	144087332	144087422	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	2	-14.4715
chr13	74858643	74862295	protein_coding	Cast	exon	ENSMUSG00000021585	ProperStrand	7	chr9	4299367	4302483	protein_coding	Aasdhppt	exon	ENSMUSG00000025894	ProperStrand	121	1	-16.2999
chr3	105758903	105758926	protein_coding	Atp5f1	exon	ENSMUSG00000000563	ProperStrand	28	chr11	97642952	97643089	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.8483
chr8	13771311	13771411	protein_coding	Cdc16	exon	ENSMUSG00000038416	ProperStrand	28	chr7	116664796	116664874	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	5	-16.4748
chr4	125853554	125855159	protein_coding	Thrap3	exon	ENSMUSG00000043962	ProperStrand	84	chr19	8798514	8798553	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-4.5626
chr4	83102371	83102409	protein_coding	Psip1	utr3	ENSMUSG00000028484	ProperStrand	104	chr2	26493404	26493484	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	3	-7.1132
chr6	33394324	33394400	protein_coding	Exoc4	intron	ENSMUSG00000029763	ProperStrand	120	chr7	116663638	116663676	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.4132
chr7	121776087	121778055	protein_coding	Calca	exon	ENSMUSG00000030669	ProperStrand	1	chr4	131908689	131908754	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-inf
chr11	119134220	119134262	protein_coding	Gaa	exon	ENSMUSG00000025579	ProperStrand	149	chr11	68876541	68876574	tRNA	tRNA1821-SerGCT	.	953386	ProperStrand	39	1	-12.3568
chr6	29493306	29493342	protein_coding	Tnpo3	exon	ENSMUSG00000012535	ProperStrand	58	chr13	24566888	24566946	protein_coding	Cmah	utr3	ENSMUSG00000016756	NonProperStrand	53	1	-13.6341
chr13	73953569	73953624	protein_coding	Slc12a7	utr3	ENSMUSG00000017756	ProperStrand	80	chr18	35102297	35102367	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-6.0223
chr4	155366536	155366553	protein_coding	B3galt6	exon	ENSMUSG00000050796	ProperStrand	40	chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	2	-13.6155
chr17	24856760	24856790	antisense	Snhg9	.	ENSMUSG00000090101	ProperStrand	218	chr8	13876097	13876157	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-4.6219
chr16	90001792	90001808	protein_coding	Tiam1	intron	ENSMUSG00000002489	ProperStrand	80	chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	1	-11.9881
chr2	130109497	130109513	protein_coding	Idh3b	exon	ENSMUSG00000027406	ProperStrand	146	chr7	13516147	13516202	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	1	-6.8959
chr11	120148960	120148976	protein_coding	Bahcc1	exon	ENSMUSG00000039741	NonProperStrand	268	chr16	90386836	90386853	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	1	-9.2100
chr3	101387668	101387716	protein_coding	Atp1a1	exon	ENSMUSG00000033161	ProperStrand	316	chr1	162967513	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-1.7337
chr11	97698100	97698117	protein_coding	Lasp1	utr3	ENSMUSG00000038366	NonProperStrand	11	chr7	118219622	118219703	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-7.5402
chr4	122970393	122970483	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	chr1	145626134	145626191	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-3.1133
chr4	6917955	6917974	protein_coding	Tox	intron	ENSMUSG00000041272	NonProperStrand	4	chr7	29136529	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-7.7378
chr6	119429927	119430027	protein_coding	Fbxl14	exon	ENSMUSG00000030019	ProperStrand	17	chr7	52302597	52302614	protein_coding	Prr12	exon	ENSMUSG00000046574	ProperStrand	86	1	-15.1568
chr17	57163719	57163819	protein_coding	Khsrp	exon	ENSMUSG00000007670	ProperStrand	353	chr10	110932430	110933117	protein_coding	Nap1l1	exon	ENSMUSG00000058799	ProperStrand	185	1	-7.5146
chrX	72214248	72214264	protein_coding-noncoding	Gab3	utr3	ENSMUSG00000032750	ProperStrand	420	chr3	94778661	94778677	protein_coding	Pi4kb	utr5	ENSMUSG00000038861	NonProperStrand	18	1	-11.8581
chr5	21214138	21214156	LTR	ORR1B1-int	MaLR	chr5ORR1B1-int21213986	NonProperStrand	1	chr4	116136698	116136764	protein_coding	Mast2	utr5	ENSMUSG00000003810	ProperStrand	37	1	-inf
chr9	78215595	78215684	protein_coding	Dppa5a	exon	ENSMUSG00000060461	ProperStrand	79	chr1	89673720	89673784	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-2.7722
chr19	8798483	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	chr1	162968216	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	7	-4.7620
chr8	74490999	74491045	protein_coding	Zfp961	intron	ENSMUSG00000052446	ProperStrand	35	chr1	88247768	88247876	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-6.1551
chr17	56597630	56597708	protein_coding	Ptprs	utr5	ENSMUSG00000013236	ProperStrand	152	chr1	89673606	89673696	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-1.6946
chr11	115657042	115657089	protein_coding	2310067B10Rik	exon	ENSMUSG00000020747	ProperStrand	74	chr1	158579069	158579159	protein_coding	Abl2	utr3	ENSMUSG00000026596	ProperStrand	37	1	-13.8710
chr10	79454843	79454860	protein_coding	Cnn2	intron	ENSMUSG00000004665	NonProperStrand	3	chr17	36066752	36067011	protein_coding	Ppp1r10	exon	ENSMUSG00000039220	ProperStrand	45	1	-inf
chr6	94163156	94163173	protein_coding	Magi1	intron	ENSMUSG00000045095	ProperStrand	106	chr4	56910527	56910615	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	3	-11.7590
chr8	107783509	107783527	protein_coding	Tradd	exon	ENSMUSG00000031887	ProperStrand	23	chr19	8963058	8963148	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.0031
chr15	81110991	81111009	SINE	ID4	ID	chr15ID481110956	ProperStrand	272	chr11	62416992	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-3.1718
chr2	90235285	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr3	88667519	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	3	-0.8234
chr3	95634762	95634786	protein_coding	Prpf3	exon	ENSMUSG00000015748	ProperStrand	29	chr4	106472505	106472522	protein_coding	Acot11	intron	ENSMUSG00000034853	ProperStrand	61	1	-14.7471
chr15	79749238	79751807	protein_coding	Cbx7	exon	ENSMUSG00000053411	ProperStrand	62	chr15	98356776	98356814	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	2	-12.3025
chr1	134018692	134018903	protein_coding	Cdk18	exon	ENSMUSG00000026437	ProperStrand	51	chr15	82956550	82956612	protein_coding	Poldip3	utr3	ENSMUSG00000041815	ProperStrand	57	1	-13.7444
chr4	141641625	141641641	lincRNA	Gm10565	exon	ENSMUSG00000073728	NonProperStrand	2	chr16	57391589	57391674	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	1	-17.8932
chr17	65060196	65061632	protein_coding	Man2a1	exon	ENSMUSG00000024085	ProperStrand	20	chr11	77995191	77995221	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-8.3851
chrX	148705760	148705857	protein_coding	Kdm5c	exon	ENSMUSG00000025332	ProperStrand	139	chr9	120038650	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.6408
chr1	157925559	157925577	protein_coding	Fam163a	utr3	ENSMUSG00000015484	ProperStrand	1	chr8	24283831	24283883	protein_coding	Agpat6	utr3	ENSMUSG00000031545	ProperStrand	11	1	-inf
chr17	45707979	45708035	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	NonProperStrand	4	chr2	154386882	154386899	protein_coding	E2f1	exon	ENSMUSG00000027490	NonProperStrand	2	1	-inf
chr13	59858044	59858088	protein_coding	Isca1	utr3	ENSMUSG00000044792	ProperStrand	5	chr11	6428060	6428088	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-13.4048
chr10	10673954	10673971	protein_coding	Grm1	intron	ENSMUSG00000019828	ProperStrand	38	chr9	43945145	43945307	protein_coding	Mcam	exon	ENSMUSG00000032135	ProperStrand	27	1	-15.8567
chr11	76120421	76120441	protein_coding	Nxn	intron	ENSMUSG00000020844	ProperStrand	20	chr1	162965986	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-5.7229
mmu-miR-1949	6	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr15	76735452	76736372	protein_coding	Rpl8	exon	ENSMUSG00000003970	ProperStrand	191	3	-13.4868
chr13	74460609	74461353	protein_coding	Sdha	exon	ENSMUSG00000021577	ProperStrand	70	chr10	90581039	90581129	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-4.5113
chr5	123252170	123252192	protein_coding	Anapc5	exon	ENSMUSG00000029472	ProperStrand	92	chr9	120038613	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.2979
chr16	35933119	35933203	protein_coding	Dtx3l	exon	ENSMUSG00000049502	ProperStrand	152	chr7	148634776	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-2.3228
chr15	77793720	77794514	protein_coding	Eif3d	exon	ENSMUSG00000016554	ProperStrand	69	chr17	13115738	13115782	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	1	-7.2551
chr2	181272905	181272931	protein_coding	Dnajc5	intron	ENSMUSG00000000826	ProperStrand	14	chr1	162966818	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	2	-14.6637
chr19	8798484	8798543	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	NonProperStrand	4	chr15	98350186	98350286	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	NonProperStrand	9	1	-19.8837
chr1	53264515	53264849	protein_coding	Pms1	exon	ENSMUSG00000026098	ProperStrand	16	chr16	23110951	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.9771
chr12	8928882	8928943	protein_coding	Laptm4a	exon	ENSMUSG00000020585	ProperStrand	15	chr11	55296276	55296332	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	4	-21.9160
chr4	40208061	40208077	protein_coding	Topors	exon	ENSMUSG00000036822	NonProperStrand	1	chr14	76247710	76247763	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	NonProperStrand	16	1	-inf
chr10	13562823	13562840	protein_coding	Aig1	intron	ENSMUSG00000019806	ProperStrand	49	chrX	12738569	12738629	protein_coding	Usp9x	exon	ENSMUSG00000031010	ProperStrand	174	1	-11.5855
chr10	21719086	21719138	protein_coding	Sgk1	utr3	ENSMUSG00000019970	ProperStrand	55	chr1	93320500	93320517	protein_coding	Per2	exon	ENSMUSG00000055866	NonProperStrand	44	1	-14.1120
chr7	150429747	150429763	protein_coding	Kcnq1	intron	ENSMUSG00000009545	NonProperStrand	133	chr16	23111775	23111808	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-0.8043
chr11	62416580	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	chr1	162967489	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	17	-0.9333
chr10	77362851	77362881	protein_coding	Lrrc3	utr3	ENSMUSG00000051652	ProperStrand	6	chr15	79913287	79913334	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-13.3721
chr13	100894856	100896567	protein_coding	Smn1	exon	ENSMUSG00000021645	ProperStrand	22	chr1	95319887	95320359	protein_coding	Hdlbp	exon	ENSMUSG00000034088	ProperStrand	97	1	-14.3881
chr6	30388749	30388779	protein_coding	Klhdc10	intron	ENSMUSG00000029775	ProperStrand	14	chr12	112779242	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-7.6743
chr4	46472793	46472810	protein_coding	Anp32b	intron	ENSMUSG00000028333	ProperStrand	229	chr16	32369472	32369490	protein_coding	Ubxn7	exon	ENSMUSG00000053774	NonProperStrand	8	2	-19.9503
chr13	9833577	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr19	8800313	8800731	lincRNA	Snhg1	exon	ENSMUSG00000090867	ProperStrand	100	2	-6.6871
chr2	37433376	37433392	protein_coding	Strbp	utr3	ENSMUSG00000026915	NonProperStrand	4	chr16	57391693	57391757	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	1	-15.9672
chr7	149562136	149562173	protein_coding	Ctsd	utr3	ENSMUSG00000007891	ProperStrand	60	chr9	26908998	26909104	protein_coding	Jam3	intron	ENSMUSG00000031990	ProperStrand	30	3	-inf
chr11	75482531	75482577	protein_coding	Myo1c	exon	ENSMUSG00000017774	ProperStrand	38	chr12	110874223	110874292	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	1	-10.8987
chr16	91227718	91227735	protein_coding	Olig2	utr3	ENSMUSG00000039830	NonProperStrand	78	chr2	164969240	164969259	protein_coding	Cdh22	exon	ENSMUSG00000053166	ProperStrand	7	1	-17.3282
chr13	40823795	40823812	protein_coding	Tfap2a	exon	ENSMUSG00000021359	ProperStrand	49	chr1	162965531	162965590	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-6.1940
chr3	86724654	86724684	protein_coding	Dclk2	utr5	ENSMUSG00000028078	ProperStrand	50	chr4	56910555	56910618	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	2	-10.4697
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr8	3642156	3642172	protein_coding	Stxbp2	intron	ENSMUSG00000004626	NonProperStrand	73	1	-12.7583
chr17	6232006	6232022	protein_coding	Tulp4	exon	ENSMUSG00000034377	NonProperStrand	265	chr18	54022214	54022230	protein_coding	Csnk1g3	utr5	ENSMUSG00000073563	ProperStrand	13	1	-13.4528
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr2	26203131	26203147	protein_coding	Gpsm1	utr3	ENSMUSG00000026930	ProperStrand	93	1	-5.0489
chr11	102167863	102167963	protein_coding	Ubtf	utr3	ENSMUSG00000020923	ProperStrand	66	chr10	110918551	110918627	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-5.6118
chr11	95911255	95911345	protein_coding	Ube2z	utr3	ENSMUSG00000014349	ProperStrand	41	chr7	88674760	88674840	snoRNA	ENSMUSG00000093107_AC167122.1	.	ENSMUSG00000093107	ProperStrand	110	1	-12.8667
chr13	99079950	99079981	protein_coding	Btf3	utr3	ENSMUSG00000021660	ProperStrand	64	chr3	123210854	123210893	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.9622
chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	chr11	106362586	106362643	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-3.6652
chr9	104082551	104082567	protein_coding	Dnajc13	exon	ENSMUSG00000032560	NonProperStrand	9	chr19	8799832	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	4	-19.6162
chr9	78039805	78046095	protein_coding	Gsta4	utr5	ENSMUSG00000032348	ProperStrand	82	chr6	71832550	71832593	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-5.0032
chr10	60566073	60567228	protein_coding	Sgpl1	exon	ENSMUSG00000020097	ProperStrand	34	chr7	118219574	118219602	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	3	-12.3879
chr5	114871077	114871094	protein_coding	Ube3b	utr3	ENSMUSG00000029577	NonProperStrand	2	chr7	54213768	54213791	protein_coding	Uevld	exon	ENSMUSG00000043262	ProperStrand	23	1	-20.4378
chr5	121593018	121593035	protein_coding	Ptpn11	exon	ENSMUSG00000043733	ProperStrand	25	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.9342
chr10	78530720	78531402	protein_coding	2610008E11Rik	exon	ENSMUSG00000060301	ProperStrand	1	chr10	23506278	23506320	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-inf
chr17	35985296	35985320	protein_coding	Mdc1	exon	ENSMUSG00000061607	ProperStrand	85	chr16	23111776	23111816	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.3785
chr1	88253711	88253741	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chr1	158372524	158372574	protein_coding	Soat1	exon	ENSMUSG00000026600	ProperStrand	21	1	-9.4730
chr5	66182218	66182237	protein_coding	N4bp2	exon	ENSMUSG00000037795	ProperStrand	30	chr2	144087323	144087447	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	2	-12.6933
chr5	143874599	143874615	protein_coding	Rnf216	utr5	ENSMUSG00000045078	ProperStrand	38	chr2	158205279	158205405	snoRNA	ENSMUSG00000064585_SNORA71	.	ENSMUSG00000064585	NonProperStrand	3	1	-inf
chr14	76174941	76176810	protein_coding	Slc25a30	exon	ENSMUSG00000022003	ProperStrand	6	chr3	153575150	153575169	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	1	-13.2527
chr2	75500603	75503477	protein_coding	Hnrnpa3	utr3	ENSMUSG00000059005	ProperStrand	289	chr4	131908689	131908797	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	6	-1.3196
chr11	106362303	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	chr7	51505227	51505308	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	1	-1.2746
chr5	19076678	19076758	protein_coding	Magi2	intron	ENSMUSG00000040003	ProperStrand	49	chr2	69521897	69521987	protein_coding	Kbtbd10	utr3	ENSMUSG00000075307	ProperStrand	2	1	-inf
chr12	74685881	74685950	protein_coding	Prkch	utr5	ENSMUSG00000021108	ProperStrand	9	chr2	38012954	38012970	protein_coding	Dennd1a	intron	ENSMUSG00000035392	NonProperStrand	128	1	-15.6566
chr11	68716817	68717906	protein_coding	Rpl26	exon	ENSMUSG00000060938	ProperStrand	130	chr11	97642952	97643008	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.2682
chr4	64785559	64785575	protein_coding	Pappa	utr5	ENSMUSG00000028370	ProperStrand	65	chr9	15130867	15131005	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	1	-9.0528
chr16	36931669	36931927	protein_coding	Golgb1	exon	ENSMUSG00000034243	ProperStrand	92	chr9	7934663	7934700	protein_coding	Yap1	exon	ENSMUSG00000053110	ProperStrand	68	1	-12.2025
chr14	27448185	27448212	protein_coding	Fam116a	exon	ENSMUSG00000040818	ProperStrand	23	chr15	34370579	34370679	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-5.3878
chr7	97030203	97030220	protein_coding	Ccdc81	exon	ENSMUSG00000039391	ProperStrand	2	chr17	24367330	24368299	protein_coding	Ccnf	exon	ENSMUSG00000072082	ProperStrand	149	1	-19.2554
chr2	29927722	29927812	protein_coding	Set	utr3	ENSMUSG00000054766	ProperStrand	167	chr11	97642962	97643042	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-0.9436
chr14	35124147	35149733	protein_coding	Glud1	exon	ENSMUSG00000021794	ProperStrand	72	chr18	35716707	35716879	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	9	-20.0297
chr9	60719914	60719930	protein_coding	Uaca	exon	ENSMUSG00000034485	ProperStrand	109	chr5	138075151	138075191	protein_coding	Lrch4	exon	ENSMUSG00000093445	ProperStrand	16	1	-14.8049
chr16	8688960	8688977	protein_coding	Usp7	utr3	ENSMUSG00000022710	NonProperStrand	11	chr7	29136525	29136615	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.5623
chr3	85888662	85930592	protein_coding	Sh3d19	exon	ENSMUSG00000028082	ProperStrand	58	chr16	23110965	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-1.5384
chr3	101963388	101963407	protein_coding	Vangl1	intron	ENSMUSG00000027860	ProperStrand	25	chr7	117166748	117166859	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	2	-10.6096
chr6	55409137	55409154	protein_coding	Adcyap1r1	intron	ENSMUSG00000029778	NonProperStrand	12	chr9	15118283	15118321	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-6.6107
chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-6.5812
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr12	92811884	92811974	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	1	-3.1750
chr7	38354919	38354935	protein_coding	Zfp536	exon	ENSMUSG00000043456	NonProperStrand	236	chr3	123210910	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-0.8273
chr8	86618974	86619041	protein_coding	Rfx1	exon	ENSMUSG00000031706	ProperStrand	20	chr9	120038599	120038673	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	4	-16.1646
chr17	45708120	45708445	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr19	44188468	44188548	snoRNA	ENSMUSG00000077391_SNORA12	.	ENSMUSG00000077391	ProperStrand	506	9	-19.8792
chr4	147301221	147302574	protein_coding	Plod1	exon	ENSMUSG00000019055	NonProperStrand	2	chr4	131865389	131865479	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-11.3495
chr18	75161108	75161172	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	chr7	148634799	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	4	-3.3765
chr10	80643775	80643799	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr17	26360446	26360536	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	2	-5.1639
chr5	100855903	100855942	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr10	17775846	17809278	protein_coding	Reps1	exon	ENSMUSG00000019854	ProperStrand	60	1	-6.6378
chr10	116499962	116499979	protein_coding	Cct2	intron	ENSMUSG00000034024	NonProperStrand	5	chr7	52382237	52382314	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-13.4414
chr14	52911708	52911808	protein_coding	Tox4	exon	ENSMUSG00000016831	ProperStrand	16	chr19	8798523	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-7.8497
chr13	28653437	28700391	lincRNA	2610307P16Rik	exon	ENSMUSG00000085936	ProperStrand	154	chr2	147011593	147011610	protein_coding	Nkx2-2	exon	ENSMUSG00000027434	ProperStrand	47	1	-11.9148
chr5	122691914	122691930	protein_coding	Hvcn1	utr3	ENSMUSG00000064267	ProperStrand	182	chr17	35089238	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-3.3809
chr6	64088283	64088301	protein_coding	Grid2	intron	ENSMUSG00000071424	NonProperStrand	76	chr4	131865460	131865515	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-3.5618
chr11	97889775	97890791	protein_coding	Rpl19	exon	ENSMUSG00000017404	ProperStrand	120	chr7	29136567	29136647	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.2914
chr6	89285129	89285184	protein_coding	Plxna1	exon	ENSMUSG00000030084	ProperStrand	233	chr9	15118323	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-2.3764
chr13	9833552	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr4	130309965	130310065	protein_coding	Pum1	exon	ENSMUSG00000028580	ProperStrand	131	2	-5.9175
chr12	100626727	100626743	protein_coding	Foxn3	exon	ENSMUSG00000033713	ProperStrand	74	chr15	79908929	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-5.0646
chr12	74652513	74652613	LTR	RLTRETN_Mm	ERVK	chr12RLTRETN_Mm74652322	ProperStrand	9	chr19	8798740	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-8.6202
chr3	37916990	37917011	LTR	RLTR11A2	ERVK	chr3RLTR11A237916948	NonProperStrand	1	chr4	3849626	3849726	protein_coding	Plag1	intron	ENSMUSG00000003282	ProperStrand	8	1	-inf
chr5	137405728	137405815	lincRNA	4933404O12Rik	intron	ENSMUSG00000085062	ProperStrand	5	chr2	158182156	158182192	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-10.1046
chr16	42539763	42539780	LINE	L2a	L2	chr16L2a42539730	NonProperStrand	11	chr5	121655088	121655151	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-7.0917
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr3	145142817	145142833	protein_coding	Col24a1	exon	ENSMUSG00000028197	ProperStrand	33	1	-7.0904
chr4	41153195	41153297	protein_coding	Ubap2	exon	ENSMUSG00000028433	ProperStrand	292	chr5	130295493	130295547	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-2.3388
chr1	132742959	132742975	protein_coding	Pigr	exon	ENSMUSG00000026417	NonProperStrand	48	chr5	74489589	74489679	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	2	-7.0346
chr5	122906472	122906562	protein_coding	Atp2a2	utr3	ENSMUSG00000029467	ProperStrand	166	chr1	162966189	162966269	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	2	-9.0923
chr4	24555746	24555767	protein_coding	Klhl32	intron	ENSMUSG00000040387	ProperStrand	67	chr4	131908236	131908340	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.2634
chr6	143291897	143291987	LTR	MTD	MaLR	chr6MTD143291754	ProperStrand	1	chr6	143291474	143291564	LTR	RMER19C	ERVK	chr6RMER19C143291185	ProperStrand	1	1	-inf
chr3	88603790	88603866	pseudogene	5830417I10Rik	.	ENSMUSG00000078684	ProperStrand	68	chr7	116663711	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.2997
chr16	90243350	90243372	protein_coding	Scaf4	exon	ENSMUSG00000022983	ProperStrand	44	chr11	69483136	69483224	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.9921
chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	chr9	89992265	89992717	protein_coding	Morf4l1	exon	ENSMUSG00000062270	ProperStrand	33	1	-8.9280
chr18	68170108	68170198	protein_coding	D18Ertd653e	intron	ENSMUSG00000024544	ProperStrand	16	chr11	116938557	116938637	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-8.8178
chr15	60661082	60661098	lincRNA	9930014A18Rik	exon	ENSMUSG00000044513	ProperStrand	54	chr7	116664869	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-4.7759
chrY	352677	352733	protein_coding-noncoding	Eif2s3y	utr5	ENSMUSG00000069049	ProperStrand	1	chr18	35716793	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-inf
chr3	96515751	96527914	protein_coding	Polr3c	utr3	ENSMUSG00000028099	ProperStrand	16	chr4	131908688	131908748	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-5.8984
chr6	7667027	7667068	LTR	RLTR23	ERV1	chr6RLTR237666790	ProperStrand	4	chr13	112539222	112540655	protein_coding	Map3k1	exon	ENSMUSG00000021754	ProperStrand	113	3	-inf
chr4	132971296	132978844	protein_coding	Slc9a1	exon	ENSMUSG00000028854	ProperStrand	28	chr4	131908688	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	8	-20.4231
chr4	43505827	43505907	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr5	65928574	65928664	protein_coding	Ube2k	utr5	ENSMUSG00000029203	ProperStrand	289	11	-15.6538
chr12	92908136	92908153	protein_coding	Ston2	intron	ENSMUSG00000020961	ProperStrand	9	chr9	15118283	15118322	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-7.2077
chr9	87608336	87608353	protein_coding	Tbx18	exon	ENSMUSG00000032419	ProperStrand	19	chr15	82980102	82980200	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	5	-inf
chr8	80041484	80041501	protein_coding	Arhgap10	intron	ENSMUSG00000037148	ProperStrand	58	chr5	108336362	108336408	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-4.9465
mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr11	104047670	104047687	protein_coding	4933407P14Rik	utr5	ENSMUSG00000049506	ProperStrand	1	1	-inf
chr19	34311709	34311728	protein_coding	Stambpl1	intron	ENSMUSG00000024776	NonProperStrand	1	chr5	23946330	23946347	protein_coding	Fastk	intron	ENSMUSG00000028959	ProperStrand	13	1	-inf
chr12	111862393	111862487	protein_coding	Dync1h1	intron	ENSMUSG00000018707	ProperStrand	648	chr3	38353202	38353221	protein_coding	Ankrd50	exon	ENSMUSG00000044864	ProperStrand	36	1	-9.5805
chr11	8379592	8379610	protein_coding	Tns3	exon	ENSMUSG00000020422	ProperStrand	81	chr12	55797769	55797859	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	3	-16.0127
chr11	70207508	70207552	protein_coding	Pelp1	exon	ENSMUSG00000018921	ProperStrand	64	chr4	131865868	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-3.0914
chr6	122678706	122678796	protein_coding	Slc2a3	utr3	ENSMUSG00000003153	ProperStrand	682	chr17	13109375	13109441	protein_coding	Tcp1	utr5	ENSMUSG00000068039	ProperStrand	116	4	-18.8328
chr11	84722944	84722961	protein_coding	Myo19	exon	ENSMUSG00000020527	ProperStrand	82	chr9	71564227	71564244	protein_coding	Cgnl1	exon	ENSMUSG00000032232	ProperStrand	46	1	-13.2227
chr4	74843493	74843509	LINE	Lx9	L1	chr4Lx974843264	NonProperStrand	30	chr18	73693114	73693139	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-6.8967
chr2	35419880	35419897	protein_coding	Dab2ip	intron	ENSMUSG00000026883	NonProperStrand	58	chr17	35994446	35994504	protein_coding	Mdc1	exon	ENSMUSG00000061607	ProperStrand	85	1	-12.6829
chr2	120361353	120365058	protein_coding	Zfp106	exon	ENSMUSG00000027288	ProperStrand	199	chr13	8766291	8766307	protein_coding	Adarb2	utr3	ENSMUSG00000052551	ProperStrand	292	1	-7.7459
chr7	135379713	135379783	protein_coding	9130023H24Rik	utr3	ENSMUSG00000062944	ProperStrand	1	chr3	123210889	123210979	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-inf
chr14	51427117	51427219	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr17	35822057	35822257	protein_coding	Ddr1	exon	ENSMUSG00000003534	ProperStrand	129	2	-9.2926
chr10	80809668	80809684	protein_coding	Hmg20b	exon	ENSMUSG00000020232	ProperStrand	157	chr11	48614367	48614415	snoRNA	ENSMUSG00000064500_SNORD95	.	ENSMUSG00000064500	ProperStrand	100	1	-10.3569
chr6	37382296	37382313	protein_coding	Creb3l2	intron	ENSMUSG00000038648	NonProperStrand	5	chr19	8798740	8798809	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-9.8951
chr11	3547564	3547588	lincRNA	Tug1	intron	ENSMUSG00000056579	ProperStrand	15	chr16	23111402	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-6.1656
chr10	87785923	87785940	protein_coding	Dram1	utr3	ENSMUSG00000020057	ProperStrand	24	chr4	116875227	116875249	snRNA	ENSMUSG00000070228_U5	.	ENSMUSG00000070228	ProperStrand	131	1	-13.5994
chr11	67167096	67167112	protein_coding	Myh13	exon	ENSMUSG00000060180	ProperStrand	145	chr5	121655032	121655062	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.1886
chr17	39980073	39980115	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr11	98190871	98190888	protein_coding	Neurod2	utr5	ENSMUSG00000038255	ProperStrand	15	1	-10.0286
chr7	31349807	31350119	antisense	Gm17104	.	ENSMUSG00000091271	ProperStrand	11	chr7	29136526	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.5623
chr19	53320040	53320056	protein_coding	Add3	utr3	ENSMUSG00000025026	NonProperStrand	13	chr10	23505259	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.8218
chr16	17928124	17928142	protein_coding	Slc25a1	exon	ENSMUSG00000003528	ProperStrand	23	chr11	69483136	69483192	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-7.0710
chr6	119058701	119058721	protein_coding	Cacna1c	intron	ENSMUSG00000051331	ProperStrand	46	chr5	121655127	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.2480
chr13	13560562	13560662	protein_coding	Nid1	exon	ENSMUSG00000005397	ProperStrand	112	chr1	88247598	88247974	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	1	-6.1219
chr16	23111421	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	NonProperStrand	38	chr1	162965981	162966033	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	NonProperStrand	8	1	-18.0902
chr12	101759078	101759095	Low_complexity	GC_rich	Low_complexity	chr12GC_rich101758901	ProperStrand	34	chr4	131908380	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.3115
chr14	75727458	75727548	protein_coding	Zc3h13	exon	ENSMUSG00000022000	ProperStrand	42	chr15	82980103	82980183	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-7.8518
chr14	121865204	121865433	protein_coding	Slc15a1	exon	ENSMUSG00000025557	ProperStrand	14	chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-8.7702
chr12	60173450	60173550	protein_coding	Pnn	exon	ENSMUSG00000020994	ProperStrand	42	chr19	44379512	44379546	protein_coding	Scd2	utr3	ENSMUSG00000025203	ProperStrand	219	1	-11.4361
chr17	25708771	25708789	lincRNA	2810468N07Rik	intron	ENSMUSG00000091475	NonProperStrand	2	chr16	11144176	11144277	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	1	-18.1559
chr14	21365643	21365661	antisense	1810062O18Rik	.	ENSMUSG00000084925	ProperStrand	4	chr17	13112450	13112511	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-10.1729
chr15	51794895	51794963	protein_coding	Rad21	utr3	ENSMUSG00000022314	ProperStrand	85	chr6	71832550	71832574	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	2	-8.1398
chr10	74524205	74524221	protein_coding	Bcr	exon	ENSMUSG00000009681	NonProperStrand	23	chr1	74410963	74411124	protein_coding	Gm216	exon	ENSMUSG00000073650	ProperStrand	33	1	-16.3962
chr2	173505995	173506085	protein_coding	Rab22a	intron	ENSMUSG00000027519	ProperStrand	9	chr16	23110828	23110890	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-11.2656
chr19	55401096	55401113	protein_coding	Vti1a	intron	ENSMUSG00000024983	NonProperStrand	62	chr4	116827118	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	2	-11.2290
chr1	14300061	14300077	protein_coding	Eya1	utr5	ENSMUSG00000025932	ProperStrand	4	chr1	162965531	162965554	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-8.7752
chrX	91781271	91785357	protein_coding	Maged1	exon	ENSMUSG00000025151	ProperStrand	43	chr16	23110852	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	13	-23.9658
chr11	50024070	50024101	protein_coding	Sqstm1	exon	ENSMUSG00000015837	ProperStrand	36	chr4	53873596	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	1	-10.0739
chr17	9142526	9142543	protein_coding	Pde10a	intron	ENSMUSG00000023868	NonProperStrand	78	chr14	76247741	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-3.6804
chr11	62416575	62416603	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr12	87860841	87860884	protein_coding	Esrrb	utr3	ENSMUSG00000021255	ProperStrand	254	2	-9.9048
chr6	28476130	28476915	protein_coding	Snd1	exon	ENSMUSG00000001424	ProperStrand	210	chr7	116663635	116663715	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-0.7089
chr8	13416895	13416912	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr4	116826700	116826750	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	2	-1.6254
chr7	28327137	28327170	protein_coding	Pld3	utr5	ENSMUSG00000003363	ProperStrand	8	chr5	115939508	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-11.9945
chr19	46451419	46451439	protein_coding	Actr1a	utr3	ENSMUSG00000025228	ProperStrand	27	chr1	38164480	38164531	protein_coding	Rev1	exon	ENSMUSG00000026082	ProperStrand	48	2	-19.9429
chr6	125131068	125131133	protein_coding	Ncapd2	exon	ENSMUSG00000038252	ProperStrand	170	chr2	26493384	26493474	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-1.9274
chr1	70167990	70168007	protein_coding	Spag16	intron	ENSMUSG00000053153	NonProperStrand	34	chr14	76247711	76247785	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-5.2673
chr6	124881546	124881563	protein_coding	Mlf2	utr5	ENSMUSG00000030120	ProperStrand	80	chr1	71341491	71341508	protein_coding	Abca12	exon	ENSMUSG00000050296	NonProperStrand	143	1	-10.9916
chr2	179322378	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr2	26494706	26494800	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-2.6313
chr8	96829322	96830005	protein_coding	Nup93	exon	ENSMUSG00000032939	ProperStrand	43	chr10	23505165	23505245	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-4.9273
chr10	93342824	93349742	protein_coding	Metap2	exon	ENSMUSG00000036112	ProperStrand	78	chr2	57034794	57034863	tRNA	tRNA1747-GlyGCC	.	334101	ProperStrand	2	1	-inf
chr14	21380168	21395908	protein_coding	Usp54	exon	ENSMUSG00000034235	ProperStrand	20	chr9	15119630	15119728	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	4	-15.0079
chr6	40427953	40427969	protein_coding	Ssbp1	exon	ENSMUSG00000029911	ProperStrand	5	chr7	116664819	116664909	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-7.4478
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr7	116664794	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	5	-1.1625
chr2	129998658	129998709	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr7	133520561	133520661	protein_coding	Spns1	utr5	ENSMUSG00000030741	ProperStrand	9	1	-11.9908
chr5	127687076	127687156	LTR	ORR1A2	MaLR	chr5ORR1A2127687047	NonProperStrand	1	chr5	127686944	127687034	LTR	ORR1B1	MaLR	chr5ORR1B1127686875	ProperStrand	1	1	-inf
chr7	146083577	146083617	protein_coding	Bnip3	utr3	ENSMUSG00000078566	ProperStrand	20	chr6	71832605	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-7.8035
chr7	118213037	118219887	protein_coding	Eif4g2	exon	ENSMUSG00000005610	ProperStrand	134	chr16	23111694	23111784	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-1.6269
chr4	116862619	116862662	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	chr8	129468746	129468765	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-0.7824
chr2	90235286	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	88419023	88419041	SINE	B4	B4	chr9B488418988	ProperStrand	75	1	-4.0395
chr11	115200753	115200770	protein_coding	Otop3	exon	ENSMUSG00000018862	ProperStrand	59	chr3	130429889	130429968	protein_coding	Rpl34	intron	ENSMUSG00000062006	ProperStrand	51	4	-19.6620
chr7	34987322	34987383	protein_coding	Gpi1	utr3	ENSMUSG00000036427	ProperStrand	288	chr12	109460710	109460726	protein_coding	Ccdc85c	intron	ENSMUSG00000084883	ProperStrand	157	1	-8.2447
chr3	113332821	113332879	protein_coding	Rnpc3	exon	ENSMUSG00000027981	ProperStrand	9	chr16	23109052	23109090	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-11.1555
chr8	31436465	31436482	LINE	Lx7	L1	chr8Lx731436390	ProperStrand	23	chr7	133941222	133941259	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	1	-10.2767
chr6	88836033	88836956	protein_coding	Mcm2	exon	ENSMUSG00000002870	ProperStrand	83	chr9	59518425	59518444	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	3	-14.8780
chr17	32469014	32469032	protein_coding	Akap8l	intron	ENSMUSG00000002625	ProperStrand	10	chr4	131908380	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.5892
chr1	58342533	58344543	antisense	Gm15759	.	ENSMUSG00000089822	ProperStrand	2	chr17	24665444	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-12.3390
chr18	78020602	78020662	protein_coding	Atp5a1	exon	ENSMUSG00000025428	ProperStrand	254	chr14	57204539	57204555	protein_coding	Parp4	exon	ENSMUSG00000054509	NonProperStrand	113	1	-9.1510
chr6	38542710	38542736	protein_coding	Luc7l2	exon	ENSMUSG00000029823	ProperStrand	85	chr9	120039598	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	3	-7.0143
chr9	102622480	102622570	protein_coding	Amotl2	exon	ENSMUSG00000032531	ProperStrand	54	chr8	32260339	32260419	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-4.8328
chr5	127737478	127737494	antisense	1700085B03Rik	.	ENSMUSG00000087104	ProperStrand	55	chr7	133436119	133436175	protein_coding	Sbk1	utr3	ENSMUSG00000042978	ProperStrand	24	1	-15.3219
chr17	35822057	35822257	protein_coding	Ddr1	exon	ENSMUSG00000003534	ProperStrand	129	chr17	31722744	31722760	protein_coding	Pknox1	intron	ENSMUSG00000006705	ProperStrand	110	1	-10.5591
chr14	45949538	45949554	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-2.1160
chr12	4214022	4214112	protein_coding	Cenpo	utr3	ENSMUSG00000020652	ProperStrand	6	chr16	23110921	23111001	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.7876
chr7	150717298	150717350	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	chr5	147646744	147646844	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	1	-0.9267
chr2	157614834	157625219	protein_coding	Ctnnbl1	exon	ENSMUSG00000027649	ProperStrand	26	chr6	115758040	115758120	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-7.1310
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr15	79585216	79585232	lincRNA	Gm16576	exon	ENSMUSG00000087543	NonProperStrand	55	2	-7.6871
chr5	135852249	135852294	protein_coding	Pom121	utr3	ENSMUSG00000053293	ProperStrand	127	chr19	8799043	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	2	-7.2964
chr10	95005291	95005391	protein_coding	Ube2n	utr3	ENSMUSG00000074781	ProperStrand	10	chr9	120038613	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-10.6868
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr7	148634702	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	5	-1.2964
chr17	84633610	84633643	protein_coding	Thada	intron	ENSMUSG00000024251	ProperStrand	47	chr18	35716788	35716835	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.5824
chr6	38461895	38461912	protein_coding	Ubn2	utr3	ENSMUSG00000038538	ProperStrand	86	chr16	23111372	23111415	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-2.7308
chr2	181357012	181366227	protein_coding	Prpf6	exon	ENSMUSG00000002455	ProperStrand	54	chr11	94618130	94618170	pseudogene	Gm11545	.	ENSMUSG00000075611	ProperStrand	1	1	-inf
chr8	86096582	86096606	protein_coding	Tecr	exon	ENSMUSG00000031708	ProperStrand	100	chr18	53633345	53633362	protein_coding	Prdm6	exon	ENSMUSG00000069378	ProperStrand	7	1	-16.7419
chr10	127521035	127521069	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr10	127684285	127684302	protein_coding	Timeless	exon	ENSMUSG00000039994	NonProperStrand	4	1	-14.3432
chr5	72692917	72694043	protein_coding	Corin	exon	ENSMUSG00000005220	NonProperStrand	11	chr9	14397578	14397594	protein_coding	Amotl1	exon	ENSMUSG00000013076	ProperStrand	72	1	-16.4521
chr11	107517557	107522419	protein_coding	Helz	exon	ENSMUSG00000020721	ProperStrand	60	chr17	39985662	39985725	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	2	-9.6573
chr6	34587123	34587140	protein_coding	Cald1	intron	ENSMUSG00000029761	ProperStrand	19	chr4	131866608	131866674	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	1	-11.4351
chr2	150296998	150297043	protein_coding	Zfp345	utr3	ENSMUSG00000074731	ProperStrand	1	chr5	130295414	130295504	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-inf
chr8	109585722	109587590	protein_coding	Tmed6	exon	ENSMUSG00000031919	ProperStrand	4	chr11	106362330	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-11.4809
chr1	93308510	93308526	protein_coding	Hes6	utr3	ENSMUSG00000067071	NonProperStrand	2	chr7	52381737	52381758	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	2	-inf
chr6	67221237	67233958	protein_coding	Serbp1	exon	ENSMUSG00000036371	ProperStrand	261	chr9	15119698	15119968	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	4	-3.1073
chr16	32426288	32426316	protein_coding-noncoding	Tctex1d2	utr5	ENSMUSG00000014075	ProperStrand	5	chr2	26494708	26494801	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	5	-inf
chr3	96654255	96654271	protein_coding	Pdzk1	exon	ENSMUSG00000038298	ProperStrand	101	chr11	114533105	114533131	protein_coding	Rpl38	exon	ENSMUSG00000057322	ProperStrand	29	1	-13.7447
chr6	34839290	34841425	protein_coding	Wdr91	exon	ENSMUSG00000058486	ProperStrand	15	chr17	39985586	39985676	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-8.7194
chr19	44079677	44079693	protein_coding	Cyp2c44	utr3	ENSMUSG00000025197	NonProperStrand	21	chr16	23110963	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.5481
chr19	24552582	24552600	protein_coding	Pip5k1b	intron	ENSMUSG00000024867	NonProperStrand	40	chr4	131865868	131865907	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.4299
chr13	60797712	60797782	protein_coding	Dapk1	exon	ENSMUSG00000021559	ProperStrand	109	chr1	162967489	162967518	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-2.4174
chr7	52382617	52382634	protein_coding	Rpl13a	exon	ENSMUSG00000074129	ProperStrand	269	chr15	34370545	34370619	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-1.1088
chr2	181526191	181526271	protein_coding	Myt1	intron	ENSMUSG00000010505	NonProperStrand	2	chr4	77029246	77029336	protein_coding	Ptprd	intron	ENSMUSG00000028399	ProperStrand	198	1	-18.5779
chr16	33617252	33617285	protein_coding	Slc12a8	exon	ENSMUSG00000035506	ProperStrand	52	chr18	33954817	33954907	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-3.7708
chr8	11427556	11427572	protein_coding	Col4a2	exon	ENSMUSG00000031503	ProperStrand	74	chr9	15119631	15119695	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.2728
chr10	74524205	74524221	protein_coding	Bcr	exon	ENSMUSG00000009681	NonProperStrand	23	chr18	35714196	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-5.2752
chr7	52382232	52382285	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	chr10	107800754	107800854	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	1	-3.2147
chr11	54706374	54706454	SINE	B3	B2	chr11B354706339	ProperStrand	1	chr11	54706101	54706191	SINE	B3A	B2	chr11B3A54705988	ProperStrand	1	1	-inf
chr9	119394518	119394535	protein_coding	Scn5a	utr3	ENSMUSG00000032511	ProperStrand	19	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.4761
chr1	181707881	181709750	protein_coding	Ahctf1	exon	ENSMUSG00000026491	ProperStrand	39	chr15	79913288	79913326	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.4040
chr6	85388876	85389659	protein_coding	Smyd5	exon	ENSMUSG00000033706	ProperStrand	107	chr18	62695821	62695859	protein_coding	Fbxo38	exon	ENSMUSG00000042211	ProperStrand	18	1	-14.5982
chr9	78023182	78023244	misc_RNA	7SK	.	ENSMUSG00000065037	NonProperStrand	6	chr13	59230539	59230555	protein_coding	Ntrk2	utr3	ENSMUSG00000055254	NonProperStrand	9	1	-18.9485
chr4	122970450	122970526	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	chr17	24856619	24856719	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-1.1762
chr1	182523040	182524200	protein_coding	Parp1	exon	ENSMUSG00000026496	ProperStrand	227	chr2	158182156	158182189	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	2	-4.4719
chr2	131072884	131072901	protein_coding	Mavs	utr3	ENSMUSG00000037523	NonProperStrand	7	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.7768
chr11	119136228	119136244	protein_coding	Gaa	exon	ENSMUSG00000025579	NonProperStrand	201	chr2	158457348	158457364	protein_coding	Actr5	exon	ENSMUSG00000037761	NonProperStrand	94	1	-9.9867
chrX	147419503	147419537	protein_coding	Gnl3l	utr3	ENSMUSG00000025266	ProperStrand	52	chr2	26493407	26493497	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	9	-21.0196
chrX	165278001	165278091	protein_coding	Arhgap6	intron	ENSMUSG00000031355	NonProperStrand	6	chr8	81643637	81643717	protein_coding	Zfp827	intron	ENSMUSG00000071064	NonProperStrand	28	1	-18.9950
chr8	24785706	24785724	protein_coding	Zmat4	intron	ENSMUSG00000037492	ProperStrand	18	chr7	116663710	116663729	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.7447
chr16	22254566	22254610	protein_coding	Tra2b	exon	ENSMUSG00000022858	ProperStrand	32	chr2	24825186	24827046	protein_coding	Wdr85	exon	ENSMUSG00000026975	ProperStrand	323	1	-11.2094
chr19	15979977	15979995	protein_coding	Psat1	utr3	ENSMUSG00000024640	ProperStrand	33	chr2	26493366	26493420	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-4.8821
chr7	52958453	52958469	protein_coding	Car11	exon	ENSMUSG00000003273	NonProperStrand	250	chr11	117617299	117617350	protein_coding	Tnrc6c	exon	ENSMUSG00000025571	ProperStrand	51	1	-10.7793
chr13	98265218	98265318	lincRNA	Gm11019	exon	ENSMUSG00000078952	ProperStrand	113	chr4	122968662	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-5.0436
chr4	116827143	116827187	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	chr2	166890552	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-1.7256
chr15	45866190	45866206	SINE	B3	B2	chr15B345866047	NonProperStrand	1	chr18	74938044	74938085	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	ProperStrand	1022	1	-inf
chr9	121374780	121374843	protein_coding	Trak1	intron	ENSMUSG00000032536	ProperStrand	152	chr9	15119337	15119428	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	4	-11.2548
chr11	69731606	69731686	protein_coding-noncoding	Eif5a	utr3	ENSMUSG00000078812	NonProperStrand	1	chr11	69731731	69731821	protein_coding	Eif5a	intron	ENSMUSG00000078812	NonProperStrand	1	1	-inf
chr13	13530135	13530179	protein_coding	Nid1	exon	ENSMUSG00000005397	ProperStrand	112	chr8	121184144	121184160	protein_coding	Cdh13	intron	ENSMUSG00000031841	NonProperStrand	17	1	-14.6253
chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr12	82825859	82826720	protein_coding	Map3k9	exon	ENSMUSG00000042724	ProperStrand	92	2	-9.1679
chr6	88051973	88051990	protein_coding	Rpn1	exon	ENSMUSG00000030062	ProperStrand	58	chr7	29136576	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.4223
chr11	120207775	120209106	protein_coding	Actg1	exon	ENSMUSG00000062825	ProperStrand	178	chr1	162967488	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	13	-19.4558
chr12	27128528	27128545	protein_coding	Rsad2	utr3	ENSMUSG00000020641	ProperStrand	1	chr10	23505152	23505259	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-inf
chr8	111359766	111359834	protein_coding	Zfhx3	intron	ENSMUSG00000038872	ProperStrand	65	chr18	33954920	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-3.3587
chr10	122003053	122003133	LINE	L1Md_F2	L1	chr10L1Md_F2122002095	ProperStrand	17	chr2	112066556	112066646	LINE	L1Md_F3	L1	chr2L1Md_F3112066478	ProperStrand	1	1	-inf
chr9	46003342	46026879	protein_coding	Sik3	exon	ENSMUSG00000034135	ProperStrand	49	chr4	131865871	131865978	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-3.7721
chr4	43505725	43505825	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr2	155543055	155543074	protein_coding	Edem2	intron	ENSMUSG00000038312	NonProperStrand	2	1	-10.3311
chr12	50485931	50485947	protein_coding	Foxg1	exon	ENSMUSG00000020950	NonProperStrand	26	chr7	133940888	133940970	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	1	-10.0270
chr9	63868722	63868738	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	chr4	135606219	135606272	protein_coding	Rpl11	exon	ENSMUSG00000059291	ProperStrand	152	2	-10.8580
chr13	32894558	32894648	protein_coding	Wrnip1	exon	ENSMUSG00000021400	ProperStrand	16	chr11	69481393	69481473	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.7383
chr5	145532371	145532393	protein_coding	Trrap	intron	ENSMUSG00000045482	ProperStrand	399	chr7	116663633	116663769	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-0.9583
chr17	28850750	28852329	protein_coding	Mapk14	utr5	ENSMUSG00000053436	ProperStrand	40	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-4.3669
chr12	112779145	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	chr2	130101241	130101279	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	9	-4.8548
chr18	54582045	54582061	lincRNA	9430076G02Rik	exon	ENSMUSG00000084814	ProperStrand	30	chr2	26493366	26493419	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-5.0680
chr9	44142881	44142971	protein_coding	H2afx	exon	ENSMUSG00000049932	ProperStrand	137	chr7	117189957	117190037	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	8	-17.1850
chr11	12151111	12239102	protein_coding	Cobl	intron	ENSMUSG00000020173	ProperStrand	133	chr16	23111389	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-1.5775
chr4	151413674	151413690	protein_coding	Nol9	exon	ENSMUSG00000028948	ProperStrand	93	chr3	37542803	37542876	protein_coding	Spry1	utr3	ENSMUSG00000037211	ProperStrand	5	1	-17.4840
chr2	153227195	153227295	protein_coding	Asxl1	exon	ENSMUSG00000042548	ProperStrand	76	chr1	162966818	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-5.7938
chr7	13516166	13516208	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr9	15119658	15119968	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	6	-1.7887
chr18	36447700	36447790	protein_coding	Pura	utr3	ENSMUSG00000043991	ProperStrand	20	chr10	23505154	23505234	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.0137
chr2	24740081	24740127	protein_coding	Ehmt1	exon	ENSMUSG00000036893	ProperStrand	45	chr10	23505152	23505246	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.6487
chr8	122465369	122465397	protein_coding	Usp10	exon	ENSMUSG00000031826	ProperStrand	98	chr15	103103338	103119599	protein_coding	Copz1	exon	ENSMUSG00000060992	ProperStrand	45	1	-12.9086
chr8	125418803	125418819	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	chr14	122307436	122372849	protein_coding	Ubac2	exon	ENSMUSG00000041765	ProperStrand	25	1	-11.3865
chr10	33903809	33903871	protein_coding	Dse	exon	ENSMUSG00000039497	ProperStrand	4	chr7	148634765	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-9.5448
chr4	147315830	147315930	protein_coding	2510039O18Rik	exon	ENSMUSG00000044496	ProperStrand	28	chr1	24621495	24621545	protein_coding	Gm10925	utr5	ENSMUSG00000090378	ProperStrand	320	1	-11.4993
chr7	4746076	4746113	protein_coding	Rpl28	utr3	ENSMUSG00000030432	ProperStrand	220	chr8	84191060	84191080	protein_coding	Inpp4b	intron	ENSMUSG00000037940	ProperStrand	6	1	-15.4688
chr4	137024691	137024781	protein_coding	Hspg2	utr5	ENSMUSG00000028763	ProperStrand	812	chr2	120102812	120102833	protein_coding	Pla2g4d	exon	ENSMUSG00000070719	NonProperStrand	1	1	-inf
mmu-miR-191-5p	2	23	miRNA	mmu-miR-191-5p	.	mmu-miR-191-5p	ProperStrand	1	chr3	58221210	58221242	protein_coding	Tsc22d2	exon	ENSMUSG00000027806	ProperStrand	7	1	-inf
chr2	144087421	144087463	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	chr4	116828379	116828441	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-1.9825
chr9	103234327	103234356	protein_coding	Topbp1	intron	ENSMUSG00000032555	ProperStrand	81	chr18	33954816	33954906	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	3	-7.5758
chr5	74489202	74489231	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr1	173200741	173200759	protein_coding	B4galt3	utr5	ENSMUSG00000052423	ProperStrand	14	1	-8.5448
chr11	102294588	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chrX	103392229	103393209	protein_coding	Pgk1	exon	ENSMUSG00000062070	ProperStrand	484	3	-11.2990
chr12	16946866	16946894	snoRNA	ENSMUSG00000064620_SNORA32	.	ENSMUSG00000064620	ProperStrand	165	chr7	116663661	116663763	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-0.9872
chr14	48149110	48149189	protein_coding	Fbxo34	exon	ENSMUSG00000037536	ProperStrand	11	chr11	78150285	78150301	protein_coding	Pigs	exon	ENSMUSG00000041958	NonProperStrand	138	1	-15.1111
chr15	81735269	81736313	protein_coding	Aco2	exon	ENSMUSG00000022477	ProperStrand	237	chr11	116938557	116938647	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-3.5291
chr8	108774261	108774345	protein_coding	Prmt7	exon	ENSMUSG00000060098	ProperStrand	43	chr11	116938557	116938647	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-6.8196
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr7	118219649	118219739	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-2.4228
chr18	76253518	76253536	protein_coding	Zbtb7c	intron	ENSMUSG00000044646	ProperStrand	64	chr2	130101258	130101308	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-6.4634
chr3	65786237	65786317	LTR	RLTR27	ERVK	chr3RLTR2765786160	ProperStrand	1	chr3	65785800	65785891	SINE	B1_Mm	Alu	chr3B1_Mm65785818	ProperStrand	1	1	-inf
chr3	89160411	89160428	protein_coding	Dcst1	intron	ENSMUSG00000042672	ProperStrand	4	chr1	182742057	182743653	protein_coding	H3f3a	utr5	ENSMUSG00000060743	ProperStrand	46	1	-19.8408
chr4	126924292	126924346	protein_coding	BC003266	exon	ENSMUSG00000042380	ProperStrand	6	chr4	131865856	131865981	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	6	-inf
chr17	32453268	32453285	protein_coding	Akap8	exon	ENSMUSG00000024045	ProperStrand	339	chr4	123066500	123066545	protein_coding	Macf1	exon	ENSMUSG00000028649	ProperStrand	320	4	-19.2925
chrX	148326381	148326462	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	chr11	62416572	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-1.4297
chr7	140190602	140190884	protein_coding	Ctbp2	exon	ENSMUSG00000030970	ProperStrand	89	chr10	80641600	80641859	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	9	-inf
chr13	88471982	88472002	LINE	L1Md_F2	L1	chr13L1Md_F288470405	ProperStrand	1	chr3	123210853	123210874	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-inf
chr1	63225577	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	chr4	122970467	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	2	-2.5443
chr2	131762554	131762644	protein_coding	Prnp	exon	ENSMUSG00000079037	ProperStrand	6	chr7	116663649	116663729	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-7.0045
chr1	74622408	74622424	protein_coding	Zfp142	exon	ENSMUSG00000026135	ProperStrand	22	chr11	69483229	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.2846
chr2	26767737	26767781	protein_coding-noncoding	Rpl7a	utr5	ENSMUSG00000062647	ProperStrand	53	chr1	167329869	167329935	protein_coding	Dcaf6	exon	ENSMUSG00000026571	ProperStrand	12	1	-16.8520
chr18	48207421	48207472	protein_coding	Gm5506	exon	ENSMUSG00000059040	ProperStrand	105	chr11	97642949	97643039	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.5737
chr7	127986473	127986547	protein_coding	Eef2k	utr5	ENSMUSG00000035064	ProperStrand	27	chr1	120847238	120847300	protein_coding	Gli2	intron	ENSMUSG00000048402	ProperStrand	148	1	-13.1178
chr8	80810205	80810222	protein_coding	Ttc29	intron	ENSMUSG00000037101	ProperStrand	22	chrX	148457333	148457353	protein_coding	Smc1a	exon	ENSMUSG00000041133	ProperStrand	104	1	-14.2503
chr7	5022094	5026338	protein_coding	U2af2	exon	ENSMUSG00000030435	ProperStrand	103	chr4	131865854	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	7	-9.9717
chrX	84483703	84483721	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr5	22252568	22252584	protein_coding	Lhfpl3	intron	ENSMUSG00000058361	ProperStrand	14	1	-11.2053
chr15	88916553	88916575	protein_coding	Trabd	utr3	ENSMUSG00000015363	ProperStrand	12	chr13	113342177	113342193	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	1	-12.0422
chr1	183853759	183873022	protein_coding	Enah	exon	ENSMUSG00000022995	ProperStrand	196	chr16	23111374	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-1.3378
chr7	119722543	119722560	protein_coding	Parva	intron	ENSMUSG00000030770	NonProperStrand	5	chr1	129271706	129271757	snoRNA	ENSMUSG00000065687_snoU6-53	.	ENSMUSG00000065687	ProperStrand	78	1	-17.9570
chr8	108222641	108222657	protein_coding	Acd	exon	ENSMUSG00000038000	NonProperStrand	8	chr19	8798740	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	7	-19.4501
chr12	108871922	108871938	SINE	B4A	B4	chr12B4A108871776	ProperStrand	43	chr4	106031681	106031731	protein_coding	Usp24	exon	ENSMUSG00000028514	ProperStrand	74	1	-13.5697
chr2	27141209	27141247	protein_coding	Vav2	exon	ENSMUSG00000009621	ProperStrand	14	chr19	44188442	44188532	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	1	-10.7481
chr11	45949876	45949893	protein_coding	Adam19	exon	ENSMUSG00000011256	ProperStrand	134	chr4	122968679	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-4.7158
chr7	35013187	35015201	protein_coding	Gpi1	intron	ENSMUSG00000036427	ProperStrand	288	chr18	33954816	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-1.9599
chr11	77851555	77851573	protein_coding	Flot2	utr5	ENSMUSG00000061981	ProperStrand	108	chr17	47278315	47278800	protein_coding	Trerf1	intron	ENSMUSG00000064043	ProperStrand	56	1	-12.2716
chr10	123167260	123167276	protein_coding	Fam19a2	intron	ENSMUSG00000044071	ProperStrand	9	chr10	23505166	23505202	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.5477
chr6	119884347	119898004	protein_coding	Wnk1	exon	ENSMUSG00000045962	ProperStrand	221	chr10	23505152	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	9	-4.9669
chr15	8585533	8585551	protein_coding	Slc1a3	utr3	ENSMUSG00000005360	NonProperStrand	5	chr18	74938067	74938135	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	ProperStrand	1022	1	-12.8043
chr16	11144194	11144294	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr18	35102299	35102343	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	NonProperStrand	4	1	-16.1306
chr6	115758049	115758120	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr11	62590603	62590631	snoRNA	ENSMUSG00000064692_SNORA67	.	ENSMUSG00000064692	ProperStrand	185	1	-3.3388
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr17	35088957	35089018	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-1.8507
chr8	115645679	115645701	LINE	Lx8	L1	chr8Lx8115645323	ProperStrand	3	chr2	130103750	130103823	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	3	-inf
chr10	79827056	79827844	protein_coding	Plk5	exon	ENSMUSG00000035486	ProperStrand	4	chr11	62416605	62416657	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-10.7841
chr2	158203989	158204069	snoRNA	ENSMUSG00000065840_SNORA71	.	ENSMUSG00000065840	ProperStrand	107	chr11	69481376	69481466	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-2.1967
chr8	3247447	3247472	protein_coding	Insr	intron	ENSMUSG00000005534	ProperStrand	25	chr5	111121067	111121200	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-8.1868
chr7	29188924	29188958	protein_coding	Samd4b	exon	ENSMUSG00000037513	ProperStrand	72	chr10	23505150	23505236	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-4.6558
chr16	37522905	37522924	protein_coding	Gtf2e1	exon	ENSMUSG00000022828	ProperStrand	16	chr4	131865885	131865987	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-6.9631
chr2	26494780	26494827	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	chr1	59761636	59761669	snoRNA	ENSMUSG00000089093_Snord11	.	ENSMUSG00000089093	ProperStrand	193	1	-1.2254
chrX	148701220	148701398	protein_coding	Kdm5c	exon	ENSMUSG00000025332	ProperStrand	139	chr5	130300478	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.2073
chr6	122662719	122663191	protein_coding	Nanog	exon	ENSMUSG00000012396	ProperStrand	66	chr1	162966191	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-7.3860
chr1	164907210	164907227	protein_coding	Fmo3	intron	ENSMUSG00000026691	ProperStrand	3	chr11	62416599	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-11.4760
chr13	101603224	101603240	protein_coding	Slc30a5	utr5	ENSMUSG00000021629	ProperStrand	12	chr8	73419657	73419769	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-14.6303
chr19	8799581	8799644	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	chr7	29136525	29136656	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	14	-0.9242
chr5	114268993	114269009	protein_coding	Selplg	utr3	ENSMUSG00000048163	NonProperStrand	11	chr11	69483194	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-13.4850
chr5	134417230	134417310	LTR	MTD	MaLR	chr5MTD134417193	NonProperStrand	1	chr5	134173018	134173108	LTR	ORR1C2	MaLR	chr5ORR1C2134172903	ProperStrand	1	1	-inf
chr12	56593401	56593484	protein_coding	Nfkbia	exon	ENSMUSG00000021025	ProperStrand	11	chr16	23110541	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.1830
chr12	110168093	110168111	protein_coding	Wdr25	intron	ENSMUSG00000040877	NonProperStrand	10	chr5	108336372	108336490	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	8	-21.5069
chr7	73967631	73967649	protein_coding	Lass3	utr3	ENSMUSG00000030510	NonProperStrand	6	chr10	23505152	23505217	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-5.3874
chr12	110918175	110918221	snoRNA	ENSMUSG00000065749_AF357428	.	ENSMUSG00000065749	ProperStrand	218	chr3	88497852	88497942	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-4.9278
mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr1	24619424	24619511	protein_coding	Gm10222	exon	ENSMUSG00000067736	ProperStrand	42	1	-6.6090
chr1	63224439	63225063	protein_coding	Eef1b2	exon	ENSMUSG00000025967	ProperStrand	106	chr11	97642987	97643077	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.5596
mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr6	114260511	114260527	protein_coding	Slc6a1	exon	ENSMUSG00000030310	NonProperStrand	147	1	-4.1744
chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	chr5	115746067	115746083	protein_coding	Coq5	utr3	ENSMUSG00000041733	NonProperStrand	2	1	-18.7816
chr1	88247742	88247865	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	chr1	9932550	9932625	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	8	-8.7759
chr17	32357133	32357199	protein_coding	Brd4	exon	ENSMUSG00000024002	ProperStrand	121	chr7	116664808	116664898	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.4325
chr7	52084635	52084735	protein_coding	Nup62	exon	ENSMUSG00000043858	ProperStrand	47	chr5	138635954	138636025	protein_coding	Mblac1	exon	ENSMUSG00000049285	ProperStrand	1	1	-inf
chr8	59992129	59992950	protein_coding	Hmgb2	utr3	ENSMUSG00000054717	ProperStrand	184	chr18	35716764	35716883	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	5	-4.6739
chr15	81937523	81937539	protein_coding	Mei1	exon	ENSMUSG00000068117	ProperStrand	53	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-5.4420
chr7	19939771	19940466	protein_coding	Ercc1	exon	ENSMUSG00000003549	ProperStrand	2	chr13	112278554	112278570	protein_coding	Gpbp1	utr5	ENSMUSG00000032745	ProperStrand	85	1	-inf
chr8	125618476	125618529	protein_coding	Spg7	exon	ENSMUSG00000000738	ProperStrand	40	chr5	140901379	140901401	protein_coding	Eif3b	exon	ENSMUSG00000056076	ProperStrand	66	1	-13.9426
chr11	118203518	118203598	protein_coding	Timp2	intron	ENSMUSG00000017466	NonProperStrand	6	chr11	118203682	118203772	protein_coding	BC100451	utr5	ENSMUSG00000076433	NonProperStrand	1	1	-inf
chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	chr11	106362640	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-4.2535
chr14	43803194	43803221	LTR	RLTR1B-int	ERV1	chr14RLTR1B-int43803102	ProperStrand	3	chr7	133726521	133726538	protein_coding	Cln3	exon	ENSMUSG00000030720	ProperStrand	87	1	-18.9272
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	113366285	113366324	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	3	-3.2175
chr6	97095258	97095275	protein_coding	A130022J15Rik	exon	ENSMUSG00000035245	ProperStrand	4	chr16	23110909	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.6489
chr4	131908687	131908746	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	chr5	108333610	108333677	snoRNA	ENSMUSG00000064453_Snord21	.	ENSMUSG00000064453	ProperStrand	201	3	-0.7129
chr19	56862359	56862449	protein_coding	A630007B06Rik	utr3	ENSMUSG00000035173	ProperStrand	11	chr7	150717335	150717415	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	3	-inf
chr4	131826030	131826125	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	chr11	97642952	97643079	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	6	-2.4764
chr9	37297149	37297169	protein_coding	BC024479	exon	ENSMUSG00000042138	NonProperStrand	3	chr19	8799370	8799433	snoRNA	ENSMUSG00000065280_SNORD28	.	ENSMUSG00000065280	ProperStrand	269	3	-inf
chr9	108415456	108415635	protein_coding	Qars	exon	ENSMUSG00000032604	ProperStrand	16	chr12	88778642	88778722	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-9.1615
chr11	106852636	106852798	protein_coding	Kpna2	exon	ENSMUSG00000018362	ProperStrand	70	chr7	116663634	116663724	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	8	-19.9085
chr4	106427575	106427602	protein_coding	Acot11	intron	ENSMUSG00000034853	ProperStrand	61	chr11	99846724	99846740	protein_coding	Gm11570	exon	ENSMUSG00000078253	NonProperStrand	3	1	-21.4093
chr11	69483136	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	chr7	67125742	67125830	snoRNA	ENSMUSG00000089375_Snord107	.	ENSMUSG00000089375	ProperStrand	451	7	-3.3946
chr5	31375628	31375865	protein_coding	Cad	exon	ENSMUSG00000013629	ProperStrand	260	chr12	102321078	102321168	protein_coding	Smek1	utr5	ENSMUSG00000041846	ProperStrand	66	1	-10.1821
chrX	148457676	148457693	protein_coding	Smc1a	exon	ENSMUSG00000041133	ProperStrand	104	chr10	39978431	39978466	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-4.3986
chr9	15120913	15121109	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	chr9	15120927	15121026	snoRNA	ENSMUSG00000065265_SNORA32	.	ENSMUSG00000065265	ProperStrand	101	16	-inf
chr7	3159521	3161263	protein_coding	AU018091	exon	ENSMUSG00000054753	ProperStrand	42	chr5	149862317	149864546	protein_coding	Hmgb1	utr5	ENSMUSG00000066551	ProperStrand	99	1	-13.0278
chr4	129843091	129843107	protein_coding	Tinagl1	utr3	ENSMUSG00000028776	NonProperStrand	2	chr1	162965981	162966044	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-10.9191
chr1	90598741	90598757	protein_coding	Arl4c	utr5	ENSMUSG00000049866	ProperStrand	25	chr18	33954820	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	4	-16.1834
chr13	9833552	9833660	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr18	35102297	35102368	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	5	-1.8343
chr17	59135251	59135268	LTR	ORR1A2	MaLR	chr17ORR1A259135069	NonProperStrand	12	chr9	25059948	25059964	protein_coding	Sept7	intron	ENSMUSG00000001833	ProperStrand	101	1	-15.5382
chr19	8963051	8963151	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	chr13	23528223	23528284	tRNA	tRNA103-LysCTT	.	1402882	ProperStrand	180	1	-0.7232
chr8	95505795	95505812	protein_coding	Slc6a2	exon	ENSMUSG00000055368	NonProperStrand	21	chr19	4739318	4739336	protein_coding	Spnb3	intron	ENSMUSG00000067889	ProperStrand	19	1	-17.6481
chr8	97173593	97173610	protein_coding	Rspry1	intron	ENSMUSG00000050079	ProperStrand	27	chr9	15119713	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.0899
chr9	15118245	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	chr14	52829459	52829571	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	3	-0.7481
chr4	149026816	149026832	protein_coding	Pik3cd	exon	ENSMUSG00000039936	ProperStrand	151	chr9	120038466	120038536	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.5178
chr11	96656082	96656108	protein_coding	Cbx1	intron	ENSMUSG00000018666	ProperStrand	14	chr9	102755789	102755812	protein_coding	Ryk	intron	ENSMUSG00000032547	NonProperStrand	3	1	-inf
chr11	70477613	70477636	protein_coding	Spag7	exon	ENSMUSG00000018287	ProperStrand	6	chr16	23110911	23111010	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-10.1290
chr2	90235291	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	196843720	196843736	lincRNA	A330023F24Rik	exon	ENSMUSG00000073474	ProperStrand	6	1	-9.1372
chr2	179913972	179914077	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr17	35088957	35088999	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-2.5000
chr17	88384505	88384565	protein_coding	Msh6	exon	ENSMUSG00000005370	ProperStrand	150	chr2	130103432	130103503	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-6.2460
chr19	32786638	32786655	protein_coding	Atad1	intron	ENSMUSG00000013662	ProperStrand	14	chr18	35716731	35716831	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.8493
chr4	124751129	124751156	protein_coding	Snip1	utr3	ENSMUSG00000050213	ProperStrand	6	chr7	116663634	116663724	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-7.0045
chr4	43505656	43505721	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr14	34206134	34206151	protein_coding	Mapk8	exon	ENSMUSG00000021936	NonProperStrand	8	1	-7.0216
chr2	90235314	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	57041565	57041581	protein_coding	Prmt3	exon	ENSMUSG00000030505	ProperStrand	89	1	-3.7197
chr3	141746434	141746450	protein_coding	Bmpr1b	intron	ENSMUSG00000052430	NonProperStrand	12	chr4	131908748	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-6.7788
chr2	173603587	173603677	protein_coding	Vapb	exon	ENSMUSG00000054455	ProperStrand	29	chr5	130300468	130300548	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.8234
chr1	143225988	143226078	LINE	L1Md_F2	L1	chr1L1Md_F2143225790	NonProperStrand	1	chr1	12658166	12658246	lincRNA	Gm17644	exon	ENSMUSG00000066918	ProperStrand	10	1	-inf
chrX	103395566	103396006	protein_coding	Pgk1	intron	ENSMUSG00000062070	ProperStrand	484	chr11	69483136	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	4	-1.0199
chr11	88001574	88002304	protein_coding	Cuedc1	exon	ENSMUSG00000018378	ProperStrand	7	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-12.5780
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr11	106362327	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-1.0379
chr11	50538917	50539007	antisense	Gm12200	.	ENSMUSG00000085902	ProperStrand	1	chr11	50539089	50539179	protein_coding	Adamts2	intron	ENSMUSG00000036545	NonProperStrand	5	1	-inf
chr10	106266059	106266075	protein_coding	Ppfia2	exon	ENSMUSG00000053825	ProperStrand	20	chr15	98356814	98356856	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	1	-9.9723
chr9	64023701	64023746	snoRNA	ENSMUSG00000064918_SNORD18	.	ENSMUSG00000064918	ProperStrand	370	chr2	32818834	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	2	-3.8231
chr14	35772787	35772804	protein_coding	Grid1	intron	ENSMUSG00000041078	ProperStrand	12	chr9	120039533	120039657	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-10.5507
chr7	133633082	133633128	protein_coding	Tufm	exon	ENSMUSG00000073838	ProperStrand	28	chr7	148634760	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	3	-12.8047
chr7	52309977	52309993	protein_coding	Prrg2	exon	ENSMUSG00000007837	NonProperStrand	281	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-0.8157
chr11	32500864	32503675	protein_coding	Stk10	exon	ENSMUSG00000020272	NonProperStrand	73	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	2	-8.9372
chr10	23505149	23505239	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	chr3	96267891	96267936	tRNA	tRNA749-HisGTG	.	681846	ProperStrand	8	2	-8.1135
chr8	32260343	32260423	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	chr1	145626118	145626175	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-0.9055
chr13	96100627	96100727	protein_coding	Zbed3	intron	ENSMUSG00000041995	ProperStrand	33	chr16	23111778	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.9163
chr15	72532220	72532240	protein_coding	Trappc9	intron	ENSMUSG00000047921	ProperStrand	44	chr18	20844412	20844488	protein_coding	B4galt6	utr3	ENSMUSG00000056124	NonProperStrand	3	1	-inf
chr17	34783153	34783242	protein_coding	Fkbpl	exon	ENSMUSG00000033739	ProperStrand	2	chr16	23110896	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-inf
chr11	94523681	94523704	SINE	B1_Mus1	Alu	chr11B1_Mus194523649	NonProperStrand	2	chr3	34549945	34550068	protein_coding	Sox2	exon	ENSMUSG00000074637	ProperStrand	299	1	-17.4797
chr14	45949522	45949553	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	chr12	13238983	13239000	protein_coding	Ddx1	intron	ENSMUSG00000037149	ProperStrand	47	1	-10.4137
chr14	15572351	15572367	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr17	43766565	43766581	protein_coding	Tdrd6	exon	ENSMUSG00000040140	NonProperStrand	15	1	-14.1039
chr7	13516143	13516209	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr17	6232006	6232022	protein_coding	Tulp4	exon	ENSMUSG00000034377	NonProperStrand	265	1	-5.7253
chr17	29194540	29194625	lincRNA	Gm16197	exon	ENSMUSG00000085912	ProperStrand	3	chr14	76247825	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-17.2696
chr4	133276512	133276556	protein_coding	Arid1a	exon	ENSMUSG00000007880	ProperStrand	465	chr1	162967513	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-1.0308
chr2	32542082	32542287	protein_coding	Fpgs	exon	ENSMUSG00000009566	ProperStrand	8	chr15	79913288	79913331	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-7.5918
chr2	26493466	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr2	31924012	31924028	protein_coding	Fam78a	utr3	ENSMUSG00000050592	NonProperStrand	340	1	-2.9124
chr16	91639594	91639673	protein_coding	Gart	exon	ENSMUSG00000022962	ProperStrand	200	chr4	131865414	131865504	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	4	-7.2740
chr2	130264090	130264156	protein_coding	Vps16	exon	ENSMUSG00000027411	ProperStrand	25	chr4	131908236	131908291	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-4.9856
chr12	32611713	32611744	protein_coding	Hbp1	utr3	ENSMUSG00000002996	ProperStrand	26	chr11	6428058	6428158	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-11.4158
chr11	118270192	118272176	protein_coding	Cant1	exon	ENSMUSG00000025575	ProperStrand	22	chr16	23110912	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.4786
chr16	23110993	23111010	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr11	98878372	98878458	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	4	-8.3477
chr4	115484059	115484086	protein_coding	Atpaf1	utr3	ENSMUSG00000028710	ProperStrand	202	chrX	153882505	153882611	protein_coding	Sms	utr3	ENSMUSG00000071708	ProperStrand	9	1	-14.7612
chr3	148500193	148500211	protein_coding	Lphn2	intron	ENSMUSG00000028184	ProperStrand	20	chr5	74489590	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-5.9076
chr9	63569111	63569130	protein_coding	Smad3	intron	ENSMUSG00000032402	ProperStrand	12	chr9	39358287	39358304	protein_coding	Olfr958	exon	ENSMUSG00000050853	NonProperStrand	266	1	-13.6135
chr11	19977331	19980082	protein_coding	Actr2	exon	ENSMUSG00000020152	ProperStrand	72	chr16	23110914	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-2.5849
chr13	104533726	104533743	protein_coding	Srek1	exon	ENSMUSG00000032621	ProperStrand	41	chr7	35000745	35000786	protein_coding	Gpi1	intron	ENSMUSG00000036427	ProperStrand	288	1	-10.9370
chr17	24185568	24185584	protein_coding	Kctd5	utr3	ENSMUSG00000016946	NonProperStrand	2	chr9	120039626	120039657	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-10.6072
chr12	17899636	17899680	LINE	L1_Mur3	L1	chr12L1_Mur317899343	NonProperStrand	2	chr15	79913288	79913347	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-inf
chr8	119098500	119098600	protein_coding	Cdyl2	utr3	ENSMUSG00000031758	ProperStrand	35	chr19	8799870	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-6.0025
chr10	86158248	86158450	protein_coding	Hsp90b1	exon	ENSMUSG00000020048	ProperStrand	396	chrX	147428287	147428310	protein_coding	Gnl3l	exon	ENSMUSG00000025266	ProperStrand	52	1	-9.8213
chr4	34552915	34554419	protein_coding	Orc3	exon	ENSMUSG00000040044	ProperStrand	10	chr1	89681233	89681287	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	5	-inf
chr16	14618620	14618637	protein_coding	A630010A05Rik	exon	ENSMUSG00000075395	ProperStrand	6	chr11	69483136	69483251	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-11.4504
chr2	90235314	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	56556420	56556436	protein_coding	Nav2	intron	ENSMUSG00000052512	ProperStrand	106	1	-3.3981
chr5	121655015	121655155	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	chr16	23109051	23109090	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	13	-7.6124
chr1	39605613	39605678	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	chr11	116938719	116938743	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-0.9562
chr8	81678781	81678801	protein_coding	Zfp827	intron	ENSMUSG00000071064	NonProperStrand	28	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-7.3584
chr6	86474972	86475000	protein_coding	Pcbp1	exon	ENSMUSG00000051695	ProperStrand	108	chr7	116664841	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-2.9706
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr11	98857013	98857235	protein_coding	Top2a	exon	ENSMUSG00000020914	ProperStrand	324	1	-5.3828
chr15	88695333	88695358	protein_coding	Pim3	utr3	ENSMUSG00000035828	ProperStrand	66	chr2	29869066	29869210	protein_coding	Spna2	exon	ENSMUSG00000057738	NonProperStrand	6	1	-17.6625
chr17	46727087	46727221	protein_coding	Ptk7	exon	ENSMUSG00000023972	ProperStrand	101	chr13	34436854	34436870	protein_coding	Slc22a23	utr5	ENSMUSG00000038267	ProperStrand	95	1	-11.3435
chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	chr7	86500371	86500388	protein_coding	Abhd2	intron	ENSMUSG00000039202	NonProperStrand	12	1	-14.0506
chr12	33638595	33638614	lincRNA	4933406C10Rik	exon	ENSMUSG00000086543	ProperStrand	52	chr16	23110839	23110999	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	7	-6.7196
chr19	44188400	44188489	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr15	93241204	93250720	protein_coding	Pphln1	exon	ENSMUSG00000036167	ProperStrand	20	3	-19.4391
chr11	4956158	4956174	protein_coding	Gas2l1	utr3	ENSMUSG00000034201	ProperStrand	33	chr8	108534481	108534548	protein_coding	Ddx28	exon	ENSMUSG00000045538	ProperStrand	3	1	-20.0264
chr5	125077278	125077294	protein_coding	Tctn2	utr3	ENSMUSG00000029386	NonProperStrand	22	chr7	132627128	132627174	protein_coding	Nsmce1	intron	ENSMUSG00000030750	ProperStrand	5	1	-19.2616
chr4	53873599	53873644	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	chr2	166890501	166890553	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-3.4392
chr9	110544350	110544366	protein_coding	Nbeal2	exon	ENSMUSG00000056724	ProperStrand	161	chr17	24856625	24856753	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-4.5074
chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	chr17	39985196	39985658	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	3	-6.3026
chr2	90235287	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chrX	99380385	99380428	protein_coding	Rps4x	exon	ENSMUSG00000031320	ProperStrand	139	1	-2.9113
chr1	64782319	64782350	protein_coding	Fzd5	exon	ENSMUSG00000045005	ProperStrand	175	chr7	150717295	150717348	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-3.4726
chr8	24169016	24169033	protein_coding	Ank1	utr5	ENSMUSG00000031543	ProperStrand	47	chr7	116664811	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-7.6425
chr5	31273680	31273770	protein_coding	Tcf23	intron	ENSMUSG00000006642	ProperStrand	3	chr6	86052744	86052824	protein_coding	Add2	intron	ENSMUSG00000030000	ProperStrand	1	1	-inf
chr4	119941547	119941564	protein_coding	Foxo6	exon	ENSMUSG00000052135	ProperStrand	31	chr5	130300443	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-9.1914
chr10	79221888	79221920	protein_coding	Rnf126	exon	ENSMUSG00000035890	ProperStrand	30	chr11	6428059	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.4908
chr2	119006703	119009653	protein_coding	Dnajc17	exon	ENSMUSG00000034278	ProperStrand	6	chr3	123210854	123210889	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-10.7622
chrX	11660698	11660766	protein_coding	Bcor	intron	ENSMUSG00000040363	NonProperStrand	293	chr15	34370545	34370591	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-1.0001
chr2	172825857	172825875	protein_coding	Rae1	utr5	ENSMUSG00000027509	NonProperStrand	44	chr7	13516146	13516205	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	1	-9.2896
chr3	55011723	55012850	protein_coding	Sohlh2	exon	ENSMUSG00000027794	ProperStrand	11	chr6	115758003	115758083	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-8.8917
chr2	32563527	32563544	protein_coding	Cdk9	exon	ENSMUSG00000009555	NonProperStrand	49	chr4	46416996	46417017	protein_coding	Hemgn	utr5	ENSMUSG00000028332	ProperStrand	1	1	-inf
chr4	99577397	99577413	protein_coding	Itgb3bp	intron	ENSMUSG00000028549	ProperStrand	55	chr17	35299507	35299642	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-4.9453
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr9	122075466	122075482	protein_coding	Snrk	exon	ENSMUSG00000038145	NonProperStrand	97	1	-10.4052
chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	chr7	118219582	118219701	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-0.8447
chr19	7349339	7349375	protein_coding	Rcor2	utr3	ENSMUSG00000024968	ProperStrand	120	chr16	23111779	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-0.9245
chr2	69193622	69193677	LINE	L1Md_F2	L1	chr2L1Md_F269191897	ProperStrand	54	chr12	90551837	90551858	protein_coding	Nrxn3	intron	ENSMUSG00000066392	ProperStrand	17	1	-16.0883
chr17	59168050	59168073	LINE	Lx8	L1	chr17Lx859167638	ProperStrand	2	chr16	23111775	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-8.9529
chr8	80082954	80084742	protein_coding	Prmt10	exon	ENSMUSG00000037134	ProperStrand	14	chr10	23505152	23505202	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.6795
chr10	120709244	120712786	protein_coding	Tbc1d30	exon	ENSMUSG00000052302	ProperStrand	233	chr7	117190015	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-2.2122
chrX	34622906	34622956	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	chr4	3762227	3762293	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	2	-0.9842
chr9	21209178	21209261	protein_coding	Ilf3	exon	ENSMUSG00000032178	ProperStrand	164	chr17	13112450	13112528	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-2.7292
chr9	26440743	26440759	DNA	MER5A	MER1_type	chr9MER5A26440741	ProperStrand	108	chr2	26768367	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-4.4656
chr17	31984077	31984133	protein_coding	Sik1	exon	ENSMUSG00000024042	ProperStrand	55	chr11	55296295	55296332	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	4	-18.4977
chr12	100034774	100034791	protein_coding	Eml5	exon	ENSMUSG00000051166	ProperStrand	26	chr7	117190017	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.9171
chr4	131908686	131908893	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	chr9	40612830	40612921	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	15	-5.9981
chr2	29925990	29926099	protein_coding	Set	exon	ENSMUSG00000054766	ProperStrand	167	chr16	23111374	23111464	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	6	-3.5442
chr9	120038467	120038557	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	chr5	23358027	23358078	snoRNA	ENSMUSG00000093321_Snord93	.	ENSMUSG00000093321	ProperStrand	218	1	-1.0169
chr17	45706455	45706531	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr1	107743297	107743313	protein_coding	Tnfrsf11a	utr3	ENSMUSG00000026321	NonProperStrand	100	5	-inf
chr2	29933258	29933289	protein_coding	Pkn3	utr5	ENSMUSG00000026785	ProperStrand	3	chr8	73419663	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-9.3031
chr16	38558845	38564233	protein_coding	Tmem39a	utr5	ENSMUSG00000002845	ProperStrand	9	chr1	89673603	89673703	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-6.9863
chr1	120733841	120733889	protein_coding	Gli2	exon	ENSMUSG00000048402	ProperStrand	148	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-7.1791
chr5	42136455	42136473	Low_complexity	GA-rich	Low_complexity	chr5GA-rich42136449	NonProperStrand	106	chr1	180266278	180267204	protein_coding	Hnrnpu	exon	ENSMUSG00000039630	ProperStrand	286	1	-9.0423
mmu-miR-1912-5p	0	17	miRNA	mmu-miR-1912-5p	.	mmu-miR-1912-5p	NonProperStrand	36	chr18	35716763	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-5.2889
chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	chr15	71624614	71624640	snoRNA	ENSMUSG00000088895_SNORA81	.	ENSMUSG00000088895	ProperStrand	348	2	-9.1133
chr1	84745826	84745895	protein_coding	Trip12	exon	ENSMUSG00000026219	ProperStrand	248	chr8	73419680	73419770	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	5	-5.8876
chr3	103797775	103797792	protein_coding	Phtf1	exon	ENSMUSG00000058388	ProperStrand	19	chr7	51505224	51505309	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	2	-16.5059
chr8	127385020	127385054	protein_coding	2810004N23Rik	exon	ENSMUSG00000031984	ProperStrand	22	chr11	69481388	69481462	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	3	-12.1314
chr12	86353847	86353937	protein_coding	Ylpm1	exon	ENSMUSG00000021244	ProperStrand	100	chr14	76247736	76247816	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	8	-23.6626
chr5	135857995	135858011	protein_coding	Pom121	exon	ENSMUSG00000053293	NonProperStrand	94	chr1	162965530	162965565	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.4840
chr4	43505795	43505875	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr3	94996590	94996680	protein_coding	Gabpb2	intron	ENSMUSG00000038766	ProperStrand	39	1	-3.8628
chr7	28146782	28146798	protein_coding	Spnb4	exon	ENSMUSG00000011751	NonProperStrand	84	chr17	24857741	24857831	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-3.2247
chr17	23957972	23958026	protein_coding	Srrm2	utr3	ENSMUSG00000039218	ProperStrand	521	chr9	78215572	78215595	protein_coding	Dppa5a	exon	ENSMUSG00000060461	ProperStrand	79	1	-8.4360
chr13	75845790	75845807	protein_coding	Ell2	intron	ENSMUSG00000001542	ProperStrand	110	chr1	88426730	88426748	protein_coding	Ptma	utr3	ENSMUSG00000026238	ProperStrand	385	1	-8.3765
chr14	82746675	82746755	LINE	L1_Mur1	L1	chr14L1_Mur182744800	ProperStrand	1	chr14	82746824	82746913	LINE	L1_Mur1	L1	chr14L1_Mur182746841	ProperStrand	1	1	-inf
chr11	103200907	103200933	protein_coding	Arhgap27	exon	ENSMUSG00000034255	ProperStrand	21	chr2	79843543	79843559	protein_coding	Pde1a	intron	ENSMUSG00000059173	NonProperStrand	275	1	-12.3901
chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr3	96528186	96528273	snoRNA	ENSMUSG00000065669_SNORA5	.	ENSMUSG00000065669	ProperStrand	180	1	-1.4545
chr7	25095448	25095465	protein_coding	Zfp94	intron	ENSMUSG00000074282	NonProperStrand	2	chr10	90581089	90581153	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-12.1998
chr18	35383225	35399039	protein_coding	Ctnna1	exon	ENSMUSG00000037815	ProperStrand	115	chr11	97642952	97643011	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.4406
chr7	86630007	86630055	LTR	MERVL_2A-int	ERVL	chr7MERVL_2A-int86629881	NonProperStrand	1	chr8	107165492	107165508	protein_coding	Fam96b	exon	ENSMUSG00000031879	ProperStrand	21	1	-inf
chr14	119693352	119693368	protein_coding	Hs6st3	intron	ENSMUSG00000053465	NonProperStrand	134	chr14	33005038	33005092	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-2.5428
chr11	64906604	64906621	protein_coding	Arhgap44	intron	ENSMUSG00000033389	ProperStrand	28	chr16	23111447	23111497	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.4504
chr4	106034781	106034956	protein_coding	Usp24	exon	ENSMUSG00000028514	ProperStrand	74	chr12	17552950	17553030	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-4.6845
chr9	98479438	98479498	protein_coding	Copb2	exon	ENSMUSG00000032458	ProperStrand	33	chr9	78327855	78327890	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-7.5256
chr16	91729701	91729722	protein_coding	Itsn1	utr5	ENSMUSG00000022957	ProperStrand	172	chr8	87525221	87525238	protein_coding	Hook2	exon	ENSMUSG00000052566	ProperStrand	204	1	-8.7493
chr12	70260035	70260074	protein_coding	Rps29	utr5	ENSMUSG00000034892	ProperStrand	124	chr11	97642952	97643055	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	4	-5.6706
chr9	26440743	26440759	DNA	MER5A	MER1_type	chr9MER5A26440741	ProperStrand	108	chr16	23110827	23110875	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-1.2589
chr11	87240292	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	chr12	55835615	55835704	snRNA	ENSMUSG00000075960_U1	.	ENSMUSG00000075960	ProperStrand	210	2	-13.4869
chr7	142889521	142889621	protein_coding	Mki67	exon	ENSMUSG00000031004	ProperStrand	286	chr4	131866224	131866291	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-1.1111
chr16	18912176	18912223	protein_coding	Hira	exon	ENSMUSG00000022702	ProperStrand	28	chr10	23505176	23505266	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.4185
chr4	126709724	126709785	protein_coding	Sfpq	intron	ENSMUSG00000028820	ProperStrand	340	chr9	15118332	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-0.7718
chr19	10620923	10620950	protein_coding	Cpsf7	utr3	ENSMUSG00000034820	ProperStrand	66	chr7	116664794	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.3863
chr16	23111466	23111509	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr1	63225577	63225654	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-2.6127
chr10	39524835	39525488	protein_coding	Rev3l	exon	ENSMUSG00000019841	ProperStrand	39	chr13	101425896	101425913	protein_coding	Taf9	utr3	ENSMUSG00000078941	ProperStrand	15	3	-19.9840
chr11	82692475	82692491	protein_coding	Rad51l3	exon	ENSMUSG00000018841	ProperStrand	112	chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-5.2311
chr11	93816909	93817191	protein_coding	Nme2	utr5	ENSMUSG00000020857	ProperStrand	8	chr7	118219574	118219602	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-13.2774
chr19	5801223	5801323	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr4	116828379	116828419	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-2.8321
chr14	33005038	33005090	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	chr8	34802317	34802417	snoRNA	ENSMUSG00000088856_SNORA48	.	ENSMUSG00000088856	ProperStrand	236	1	-1.6294
chr17	12912722	12912813	protein_coding	Igf2r	exon	ENSMUSG00000023830	NonProperStrand	8	chr7	29136599	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	NonProperStrand	27	2	-19.1506
chrX	45723908	45723988	protein_coding	Bcorl1	exon	ENSMUSG00000036959	ProperStrand	36	chr6	71832550	71832640	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-6.6205
chr2	25148560	25148595	protein_coding	Grin1	intron	ENSMUSG00000026959	ProperStrand	9	chr13	51740762	51740779	protein_coding	Cks2	utr5	ENSMUSG00000062248	NonProperStrand	4	1	-19.7249
chr15	102300983	102301073	lincRNA	Gm17403	intron	ENSMUSG00000090630	NonProperStrand	10	chr15	82980108	82980188	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-10.7890
chr7	16523200	16523524	protein_coding	Gltscr2	utr3	ENSMUSG00000041560	ProperStrand	127	chr1	63225591	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	2	-8.5341
chr14	20622276	20622320	protein_coding	Nid2	exon	ENSMUSG00000021806	ProperStrand	372	chr8	32260335	32260422	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	3	-4.2609
chr11	11867679	11870432	protein_coding	Grb10	exon	ENSMUSG00000020176	NonProperStrand	159	chr5	130300419	130300493	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.0319
chr19	45126942	45128167	protein_coding	Sfxn3	exon	ENSMUSG00000025212	NonProperStrand	22	chr9	15119967	15119990	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-9.2732
chr11	78150285	78150301	protein_coding	Pigs	exon	ENSMUSG00000041958	NonProperStrand	138	chr4	131865855	131865968	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.4053
chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr7	67125763	67125797	snoRNA	ENSMUSG00000089375_Snord107	.	ENSMUSG00000089375	ProperStrand	451	1	-2.6505
chr16	22255185	22265824	protein_coding	Tra2b	exon	ENSMUSG00000022858	NonProperStrand	6	chr10	23505534	23505601	protein_coding	Rps12	intron	ENSMUSG00000061983	ProperStrand	309	2	-20.7241
chr5	122691914	122691930	protein_coding	Hvcn1	utr3	ENSMUSG00000064267	ProperStrand	182	chr4	131865394	131865424	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-2.0412
chr4	74843493	74843509	LINE	Lx9	L1	chr4Lx974843264	NonProperStrand	30	chr5	108336363	108336406	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-6.2415
chr1	59539683	59539700	protein_coding	Fzd7	utr5	ENSMUSG00000041075	ProperStrand	373	chr14	76247711	76247821	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-1.1197
chr1	173393213	173393304	protein_coding	F11r	utr3	ENSMUSG00000038235	ProperStrand	9	chr4	131908688	131908768	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-15.2972
chr12	86369834	86369882	protein_coding	Ylpm1	exon	ENSMUSG00000021244	ProperStrand	100	chr8	64014578	64017497	protein_coding	Palld	exon	ENSMUSG00000058056	ProperStrand	39	1	-13.1573
chr2	91436231	91436336	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	chr7	118219574	118219639	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	6	-2.7813
chr5	34974520	34974620	protein_coding	Add1	utr3	ENSMUSG00000029106	ProperStrand	88	chr4	131908689	131908807	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	10	-14.3593
chr14	19102462	19102490	protein_coding	Rpl15	exon	ENSMUSG00000012405	ProperStrand	145	chr19	8800355	8800461	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-1.9970
chr2	119635213	119635267	protein_coding	Tyro3	exon	ENSMUSG00000027298	ProperStrand	35	chr5	108334195	108334285	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	3	-13.6143
chr2	130102783	130102834	protein_coding	Nop56	exon	ENSMUSG00000027405	ProperStrand	125	chr2	26493394	26493484	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-2.4318
chr2	27391844	27391938	protein_coding	Wdr5	utr3	ENSMUSG00000026917	ProperStrand	81	chr16	23109056	23109090	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-6.6860
chr3	138590003	138590071	protein_coding	Rap1gds1	utr3	ENSMUSG00000028149	ProperStrand	16	chr3	108357265	108357355	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-7.1561
chr1	58614168	58614871	protein_coding	Fam126b	exon	ENSMUSG00000038174	ProperStrand	9	chr15	98356827	98356875	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	1	-11.6318
chr5	115940291	115940406	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	chr4	122970487	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-3.0300
chr5	86561520	86561705	protein_coding	Uba6	exon	ENSMUSG00000035898	ProperStrand	17	chr2	158182202	158182230	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-7.5108
chr17	28465968	28467938	protein_coding	Rpl10a	exon	ENSMUSG00000037805	ProperStrand	121	chr7	116664801	116664924	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	5	-7.8903
chr2	9985901	9985917	protein_coding	Atp5c1	exon	ENSMUSG00000025781	ProperStrand	138	chr7	118219597	118219620	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-2.6542
chr8	126442770	126442815	protein_coding	Nup133	exon	ENSMUSG00000039509	ProperStrand	59	chr7	35129764	35129824	protein_coding	Lsm14a	utr3	ENSMUSG00000066568	ProperStrand	31	6	-18.8511
chr9	77305922	77316368	protein_coding	Lrrc1	exon	ENSMUSG00000032352	NonProperStrand	8	chr11	6428060	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	4	-inf
chr11	102294587	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr9	120037992	120038056	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-0.9933
chr11	72591966	72591984	protein_coding	Cyb5d2	utr3	ENSMUSG00000057778	ProperStrand	5	chr17	13112511	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	3	-19.6897
chr4	130305550	130305620	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	chr7	116664804	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-1.3983
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr8	97601821	97601837	protein_coding	Ccdc135	exon	ENSMUSG00000031786	ProperStrand	4	1	-17.0390
chr1	66521957	66521973	protein_coding	Unc80	intron	ENSMUSG00000055567	NonProperStrand	212	chr1	9932576	9932625	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-5.2435
chr2	129592008	129592029	LINE	L1MC1	L1	chr2L1MC1129591760	NonProperStrand	1	chr3	153575089	153575168	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	1	-inf
chr18	70668570	70683009	protein_coding	Poli	exon	ENSMUSG00000038425	ProperStrand	7	chr16	23110890	23110970	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-6.1472
chr17	24665467	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	chr6	124665407	124665521	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	3	-0.9985
chr6	7625396	7625413	protein_coding	Asns	exon	ENSMUSG00000029752	ProperStrand	59	chr5	139705061	139705149	protein_coding	Sun1	intron	ENSMUSG00000036817	ProperStrand	108	2	-18.4318
chr16	27452910	27452990	LTR	MTD	MaLR	chr16MTD27452883	ProperStrand	1	chr16	27453466	27453556	LTR	RLTR20B3	ERVK	chr16RLTR20B327453446	NonProperStrand	1	1	-inf
chr8	90496819	90496909	DNA	URR1B	MER1_type	chr8URR1B90496821	ProperStrand	1	chr12	55629647	55629727	LTR	MLT1A0	MaLR	chr12MLT1A055629633	ProperStrand	1	1	-inf
chr5	52584654	52584670	lincRNA	9230114K14Rik	exon	ENSMUSG00000087676	ProperStrand	3	chr16	23111773	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-7.8619
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr2	130101236	130101308	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-1.6988
chr5	35041818	35041857	protein_coding	Grk4	utr3	ENSMUSG00000052783	ProperStrand	15	chr16	23110909	23110999	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-3.8284
chr9	24578240	24578256	protein_coding	Tbx20	exon	ENSMUSG00000031965	NonProperStrand	110	chr16	32385020	32385046	protein_coding	Ubxn7	utr3	ENSMUSG00000053774	ProperStrand	30	1	-13.5031
chr12	110918155	110918221	snoRNA	ENSMUSG00000065749_AF357428	.	ENSMUSG00000065749	ProperStrand	218	chr10	23505152	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-1.6207
chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr17	26360447	26360489	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	3	-2.5943
chr18	42473662	42473750	protein_coding	Rbm27	exon	ENSMUSG00000024491	ProperStrand	38	chr10	30530980	30531020	tRNA	tRNA81-GluCTC	.	287309	ProperStrand	154	1	-12.3439
chr2	90781981	90782005	protein_coding	Celf1	intron	ENSMUSG00000005506	ProperStrand	61	chr10	58833770	58833807	protein_coding	P4ha1	exon	ENSMUSG00000019916	ProperStrand	50	1	-13.6465
chr1	162966189	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	chr17	35299510	35299610	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	2	-0.8335
chr11	100232569	100243062	protein_coding	Jup	exon	ENSMUSG00000001552	ProperStrand	123	chr16	23110829	23110945	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	7	-2.0073
chr12	68766434	68766514	LINE	L1_Mus2	L1	chr12L1_Mus268766146	ProperStrand	12	chr5	21964015	21964105	LINE	L1Md_T	L1	chr5L1Md_T21962107	ProperStrand	1	1	-inf
chr2	179773500	179773533	protein_coding	Psma7	exon	ENSMUSG00000027566	ProperStrand	45	chr10	23505152	23505205	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-3.0673
chr8	46115526	46115567	protein_coding	Fat1	exon	ENSMUSG00000070047	ProperStrand	306	chr14	76247716	76247806	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-2.6218
chr10	18576309	18576379	protein_coding	Perp	utr3	ENSMUSG00000019851	ProperStrand	2	chr9	120037705	120037722	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	1	-17.0193
chr2	156973336	156973392	protein_coding	Rbl1	exon	ENSMUSG00000027641	ProperStrand	5	chr7	38354919	38354935	protein_coding	Zfp536	exon	ENSMUSG00000043456	NonProperStrand	236	1	-15.6977
chr17	34255898	34255978	protein_coding	Brd2	utr5	ENSMUSG00000024335	ProperStrand	69	chr2	173902687	173902777	protein_coding	Stx16	utr5	ENSMUSG00000027522	ProperStrand	18	1	-15.4716
chr5	74938040	74938130	protein_coding	Fip1l1	exon	ENSMUSG00000029227	ProperStrand	102	chr10	90581060	90581140	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	45	-21.1921
chr15	79913288	79913352	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr2	89368462	89368479	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	1	-1.1743
chr6	85416067	85416682	protein_coding	Cct7	exon	ENSMUSG00000030007	ProperStrand	173	chr11	6428123	6428156	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	6	-9.9826
chr2	35949552	35949568	protein_coding	Lhx6	intron	ENSMUSG00000026890	NonProperStrand	17	chr10	23505149	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-5.7373
chr1	182824323	182824413	protein_coding	Lefty2	exon	ENSMUSG00000066652	ProperStrand	48	chrX	34622941	34623021	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-3.5794
chr16	23109029	23109090	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	chr17	35088971	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	2	-1.5363
chr4	100449419	100449436	protein_coding	Cachd1	utr5	ENSMUSG00000028532	NonProperStrand	18	chr16	23109027	23109091	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-9.7124
chr19	8946577	8946599	protein_coding	Ubxn1	exon	ENSMUSG00000071655	ProperStrand	68	chr13	90238619	90238719	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	2	-13.3615
chr7	146684406	146684425	protein_coding	Inpp5a	intron	ENSMUSG00000025477	ProperStrand	166	chr1	55145236	55145895	protein_coding	Hspe1	utr5	ENSMUSG00000073676	ProperStrand	31	2	-19.1148
chr2	26447688	26447704	protein_coding	Egfl7	exon	ENSMUSG00000026921	NonProperStrand	7	chrX	71517891	71517961	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-10.9474
chr4	40160911	40163403	protein_coding	Ddx58	exon	ENSMUSG00000040296	ProperStrand	18	chr4	131865855	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-6.6051
chr3	138561304	138565399	protein_coding	Tspan5	exon	ENSMUSG00000028152	ProperStrand	19	chr11	77995188	77995239	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-8.4897
chr1	134997451	134997954	protein_coding	Pik3c2b	exon	ENSMUSG00000026447	ProperStrand	24	chr5	130300528	130300551	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.1835
chr1	182530691	182530771	protein_coding	Parp1	utr3	ENSMUSG00000026496	ProperStrand	227	chr15	34370545	34370635	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-1.3379
chr8	73118885	73118903	protein_coding	Isyna1	intron	ENSMUSG00000019139	NonProperStrand	3	chr9	121823892	121823908	protein_coding	Cyp8b1	exon	ENSMUSG00000050445	NonProperStrand	101	1	-18.5718
chr4	149017445	149019525	protein_coding	Clstn1	exon	ENSMUSG00000039953	ProperStrand	173	chr16	23110847	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	8	-1.2656
chr11	83314691	83316288	protein_coding	Taf15	exon	ENSMUSG00000020680	ProperStrand	60	chr4	131865855	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-5.0143
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	5277244	5277264	protein_coding	Arid1b	intron	ENSMUSG00000069729	ProperStrand	28	1	-5.9497
chr12	80175642	80176452	protein_coding	Plekhh1	exon	ENSMUSG00000060716	ProperStrand	24	chr7	117189996	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-8.3983
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr10	83056921	83057011	protein_coding	A230046K03Rik	utr3	ENSMUSG00000034560	ProperStrand	41	3	-16.1427
chr5	74489457	74489510	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr10	76015733	76015779	protein_coding	Lss	exon	ENSMUSG00000033105	ProperStrand	56	2	-9.3948
chr2	165885277	165886302	protein_coding	Ncoa3	exon	ENSMUSG00000027678	ProperStrand	58	chr17	13115667	13115748	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	1	-7.6012
chr4	153410349	153410365	protein_coding	Ccdc27	exon	ENSMUSG00000039492	ProperStrand	94	chr11	69481394	69481432	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-2.4130
chr7	51099076	51099092	protein_coding	Klk5	intron	ENSMUSG00000074155	ProperStrand	29	chr9	15119646	15119711	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-6.6828
chr19	47173199	47173289	protein_coding	Pdcd11	exon	ENSMUSG00000025047	ProperStrand	137	chr18	35714142	35714220	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	7	-14.9706
chr2	28615596	28665188	protein_coding	Ak8	exon	ENSMUSG00000026807	NonProperStrand	21	chr11	97642952	97643014	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.3990
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr15	27819079	27819095	protein_coding	Trio	exon	ENSMUSG00000022263	NonProperStrand	20	1	-11.0144
chr2	180646452	180646552	protein_coding	Ythdf1	exon	ENSMUSG00000038848	ProperStrand	59	chr7	150717302	150717367	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-5.5396
chr2	158203993	158204093	snoRNA	ENSMUSG00000065840_SNORA71	.	ENSMUSG00000065840	ProperStrand	107	chr7	29136636	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-2.7340
chr8	83312760	83312860	protein_coding	Gab1	exon	ENSMUSG00000031714	ProperStrand	72	chr16	23111764	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-6.5604
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	112689098	112689322	protein_coding	Srgap3	exon	ENSMUSG00000030257	NonProperStrand	208	2	-3.9587
chr6	82684890	82684946	protein_coding	Hk2	exon	ENSMUSG00000000628	ProperStrand	88	chr9	120038470	120038529	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	4	-8.6570
chr14	57004675	57004705	protein_coding	Atp12a	exon	ENSMUSG00000022229	ProperStrand	7	chr16	23111376	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-12.6567
chr4	102782155	102782190	protein_coding	Wdr78	intron	ENSMUSG00000035126	ProperStrand	3	chr17	35088957	35089015	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-12.1990
chr5	116747984	116748006	LINE	L1MEc	L1	chr5L1MEc116747892	NonProperStrand	1	chr3	95463016	95463097	protein_coding	Mcl1	exon	ENSMUSG00000038612	ProperStrand	75	1	-inf
chr5	124573599	124573617	protein_coding	Pitpnm2	exon	ENSMUSG00000029406	NonProperStrand	15	chr16	23110873	23110904	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.0842
chr11	62416559	62418034	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr4	131908682	131908867	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	20	-7.2443
chr2	32818885	32818941	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	chr11	62416957	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	4	-1.1802
chr15	77158148	77158165	SINE	RSINE1	B4	chr15RSINE177158114	NonProperStrand	2	chr11	69483194	69483237	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-9.6187
chr1	162967537	162967578	non_coding	Gas5	.	ENSMUSG00000053332	ProperStrand	144	chr17	29103941	29104010	protein_coding	Kctd20	utr3	ENSMUSG00000005936	ProperStrand	21	4	-19.6976
chr11	102721343	102723926	protein_coding	Eftud2	exon	ENSMUSG00000020929	ProperStrand	86	chr1	71689558	71689580	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	1	-7.1163
chr8	72816933	72817009	protein_coding	Homer3	exon	ENSMUSG00000003573	ProperStrand	45	chr9	27130879	27130898	protein_coding	Igsf9b	exon	ENSMUSG00000034275	ProperStrand	18	1	-16.2882
chr7	109281296	109281342	protein_coding	Nup98	exon	ENSMUSG00000063550	ProperStrand	100	chr4	122970455	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	4	-19.9090
chr12	58331566	58331582	protein_coding	Mipol1	utr5	ENSMUSG00000047022	ProperStrand	40	chr7	52382153	52382429	protein_coding	Rpl13a	exon	ENSMUSG00000074129	ProperStrand	269	1	-11.1232
chr1	88423476	88426988	protein_coding	Ptma	utr3	ENSMUSG00000026238	ProperStrand	385	chrX	34622906	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-1.0655
chr7	107647824	107647914	protein_coding	Ucp2	utr3	ENSMUSG00000033685	ProperStrand	54	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	2	-15.1497
chr7	13510949	13511110	protein_coding	Rps5	exon	ENSMUSG00000012848	ProperStrand	108	chr2	57900146	57900162	protein_coding	Ermn	utr3	ENSMUSG00000026830	ProperStrand	27	1	-13.7470
chr4	131399490	131399506	protein_coding	Mecr	exon	ENSMUSG00000028910	NonProperStrand	109	chr10	23505152	23505236	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-2.0235
chr8	113495721	113495738	protein_coding	St3gal2	utr3	ENSMUSG00000031749	NonProperStrand	9	chr1	162965531	162965587	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-7.0004
chrX	99382713	99383172	protein_coding	Rps4x	exon	ENSMUSG00000031320	ProperStrand	139	chr4	131866155	131866235	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-2.1848
chr7	150743819	150745066	protein_coding	Cars	exon	ENSMUSG00000010755	ProperStrand	62	chr18	31840262	31840293	protein_coding	Sap130	exon	ENSMUSG00000024260	ProperStrand	32	1	-14.5258
chrX	6951555	6951571	protein_coding	Usp27x	exon	ENSMUSG00000046269	NonProperStrand	36	chr4	116828379	116828452	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-9.4096
chr4	131908232	131908257	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr6	124665423	124665523	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	1	-1.4231
chr5	68158282	68158298	protein_coding	Atp8a1	exon	ENSMUSG00000037685	ProperStrand	20	chr9	15119630	15119674	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.6697
chr11	102918757	102918847	protein_coding	Nmt1	exon	ENSMUSG00000020936	ProperStrand	43	chr19	45122253	45122285	protein_coding	Sfxn3	utr5	ENSMUSG00000025212	ProperStrand	14	5	-inf
chr17	24856626	24856735	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	chr3	68889170	68889246	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	19	-5.9547
chr10	79468448	79468511	protein_coding	Abca7	exon	ENSMUSG00000035722	ProperStrand	12	chr11	69483190	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-5.4834
chr5	120935303	120935405	protein_coding	Plbd2	utr3	ENSMUSG00000029598	ProperStrand	22	chr8	13416897	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	2	-13.5193
chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	chr19	8798484	8798514	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-1.4634
chr5	111800396	111809298	protein_coding	Pitpnb	exon	ENSMUSG00000050017	ProperStrand	137	chr9	15119722	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.3232
chr2	24850906	24851682	protein_coding	Pnpla7	exon	ENSMUSG00000036833	ProperStrand	13	chr4	131908357	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.0703
chr9	31228464	31228481	protein_coding	Nfrkb	utr3	ENSMUSG00000042185	NonProperStrand	8	chr6	71832633	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	2	-15.5190
chrX	123743876	123743893	LTR	LTRIS2	ERV1	chrXLTRIS2123743504	NonProperStrand	7	chr7	5062341	5062361	protein_coding	Rfpl4	exon	ENSMUSG00000035191	NonProperStrand	27	1	-20.1338
chr15	99003862	99003891	protein_coding	Spats2	exon	ENSMUSG00000051934	ProperStrand	71	chr1	162968231	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-6.4831
chr15	79376958	79376981	protein_coding	Ddx17	utr5	ENSMUSG00000055065	ProperStrand	140	chr3	123210854	123210926	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	4	-4.1829
chr19	40194270	40194357	LINE	Lx2	L1	chr19Lx240189486	ProperStrand	24	chr1	84741312	84741693	protein_coding	Trip12	exon	ENSMUSG00000026219	ProperStrand	248	5	-19.6533
chr18	73693164	73693191	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr2	158185530	158185666	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	8	-5.9186
chr16	32843355	32843456	protein_coding	1700021K19Rik	exon	ENSMUSG00000035629	ProperStrand	7	chr16	23110986	23111005	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.4785
chr2	30840849	30840867	protein_coding	Usp20	intron	ENSMUSG00000026854	ProperStrand	11	chr14	37946860	37946912	protein_coding	Ghitm	exon	ENSMUSG00000041028	ProperStrand	26	1	-18.3032
chr11	100414998	100415014	protein_coding	Ttc25	exon	ENSMUSG00000006784	NonProperStrand	119	chr11	6428088	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.0161
chr5	121656696	121656777	protein_coding	Rpl6	exon	ENSMUSG00000029614	ProperStrand	332	chr7	106628507	106630230	protein_coding	Rps3	exon	ENSMUSG00000030744	ProperStrand	159	1	-7.9370
chr1	39605589	39605656	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	chr8	113362464	113362512	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	1	-3.4441
chr1	173934303	173934322	protein_coding	Vangl2	utr3	ENSMUSG00000026556	ProperStrand	37	chr9	100745529	100756222	protein_coding	Stag1	exon	ENSMUSG00000037286	ProperStrand	10	1	-17.6667
chr18	36841950	36841981	protein_coding	Slc35a4	exon	ENSMUSG00000033272	ProperStrand	10	chr4	131908356	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-7.7635
chr10	61758630	61758829	protein_coding	Hk1	exon	ENSMUSG00000037012	ProperStrand	84	chr11	97643011	97643091	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	6	-12.0651
chr16	90754043	90754133	protein_coding	Urb1	exon	ENSMUSG00000039929	ProperStrand	71	chr4	131908267	131908347	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.1847
chrX	149934825	149934915	protein_coding	Ubqln2	utr3	ENSMUSG00000050148	ProperStrand	12	chr4	131908238	131908318	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.2270
chr10	79850032	79850068	protein_coding	Mex3d	utr5	ENSMUSG00000048696	ProperStrand	14	chr3	68889149	68889215	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-6.0690
chr8	4301749	4301784	protein_coding	Elavl1	exon	ENSMUSG00000040028	ProperStrand	39	chr16	23111453	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.9006
chr17	28736464	28736583	protein_coding	Srpk1	exon	ENSMUSG00000004865	ProperStrand	61	chr1	40053934	40053951	protein_coding	Map4k4	exon	ENSMUSG00000026074	ProperStrand	348	1	-9.7582
chr5	115940311	115940407	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	chr4	131865856	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	39	-inf
chr2	83693562	83693578	protein_coding	Fam171b	exon	ENSMUSG00000048388	NonProperStrand	175	chr9	64023228	64023286	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	1	-6.3200
chr8	58442298	58442388	protein_coding	Glra3	intron	ENSMUSG00000038257	ProperStrand	9	chr7	110699288	110699378	protein_coding	Olfr613	utr5	ENSMUSG00000078624	ProperStrand	16	1	-19.4429
chr13	6602351	6602679	protein_coding	Pfkp	exon	ENSMUSG00000021196	ProperStrand	197	chr16	42282955	42282971	protein_coding	Gap43	intron	ENSMUSG00000047261	NonProperStrand	25	1	-12.7007
chr11	45958895	45958995	protein_coding	Adam19	utr3	ENSMUSG00000011256	ProperStrand	134	chr9	78326918	78326947	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-4.7679
chr9	86679732	86679749	protein_coding	Snap91	intron	ENSMUSG00000033419	ProperStrand	17	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.6984
chr7	52302265	52302308	protein_coding	Prr12	exon	ENSMUSG00000046574	ProperStrand	86	chr7	116664814	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	5	-9.7632
chr15	73412085	73412143	protein_coding	Slc45a4	utr3	ENSMUSG00000079020	ProperStrand	127	chr7	116663738	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.3331
chr19	60849849	60849908	protein_coding	Eif3a	exon	ENSMUSG00000024991	ProperStrand	287	chr19	8799046	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-2.8849
chr2	26493412	26493512	lincRNA	Snhg7	exon	ENSMUSG00000091299	NonProperStrand	10	chr8	73419657	73419728	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	NonProperStrand	53	2	-19.8240
chr10	41644311	41644329	protein_coding	Armc2	exon	ENSMUSG00000071324	ProperStrand	281	chr2	26494758	26494829	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-0.7624
chr1	120229470	120229497	protein_coding	Mki67ip	exon	ENSMUSG00000026377	ProperStrand	1	chr17	24856626	24856737	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-inf
chr2	129998643	129998664	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr9	59513160	59513701	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	1	-2.2816
chr7	151703548	151703648	protein_coding	Ppfia1	exon	ENSMUSG00000037519	ProperStrand	32	chr16	96391557	96391613	protein_coding	Lca5l	intron	ENSMUSG00000045275	NonProperStrand	210	1	-12.0710
chr8	34059990	34060008	lincRNA	Gm3985	intron	ENSMUSG00000079070	ProperStrand	1	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-inf
chr19	53079306	53080707	protein_coding	Xpnpep1	exon	ENSMUSG00000025027	ProperStrand	49	chr1	88247743	88247779	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-5.4917
chr10	14016039	14016129	LINE	L1MEc	L1	chr10L1MEc14016005	NonProperStrand	1	chr10	14015880	14015970	LINE	L1Md_F3	L1	chr10L1Md_F314015774	NonProperStrand	1	1	-inf
chr5	138565509	138565563	protein_coding	Zscan21	intron	ENSMUSG00000037017	ProperStrand	11	chr19	17900101	17900117	snoRNA	ENSMUSG00000089540_snoU13	.	ENSMUSG00000089540	ProperStrand	99	1	-15.7557
chr15	16410384	16410464	LINE	Lx3B	L1	chr15Lx3B16410089	NonProperStrand	1	chr15	16410663	16410753	LINE	Lx3B	L1	chr15Lx3B16410621	ProperStrand	1	1	-inf
chr4	9804113	9804129	LINE	Lx5	L1	chr4Lx59803263	NonProperStrand	1	chr3	88715214	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-inf
chr11	116535920	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr11	75322802	75322902	protein_coding	Prpf8	utr3	ENSMUSG00000020850	ProperStrand	255	1	-3.1661
mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr14	45949538	45949554	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	1	-2.7258
chr14	55057856	55057872	protein_coding	Mmp14	exon	ENSMUSG00000000957	ProperStrand	61	chr8	112078887	112078925	protein_coding	Dhx38	exon	ENSMUSG00000037993	ProperStrand	27	1	-14.8914
chr1	137993699	137993949	protein_coding	Cacna1s	exon	ENSMUSG00000026407	ProperStrand	7	chr17	24857788	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-6.4221
chr18	46746449	46746507	protein_coding-noncoding	Tmed7	utr3	ENSMUSG00000033184	ProperStrand	5	chr2	4701867	4701884	protein_coding	Bend7	intron	ENSMUSG00000048186	ProperStrand	15	1	-20.1544
chr15	89254790	89254808	protein_coding	Cpt1b	exon	ENSMUSG00000078937	ProperStrand	5	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-6.5022
chr9	119410902	119421263	protein_coding	Scn5a	exon	ENSMUSG00000032511	ProperStrand	19	chr15	79913324	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-5.8137
chr14	31821840	31821891	protein_coding	Glt8d1	exon	ENSMUSG00000021916	ProperStrand	4	chr15	98356830	98356851	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	1	-13.4201
chr19	5719336	5719352	protein_coding	Ehbp1l1	exon	ENSMUSG00000024937	ProperStrand	75	chr6	87837919	87837949	protein_coding	Copg	utr5	ENSMUSG00000030058	ProperStrand	68	1	-12.6135
chr4	131908236	131908344	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	chr4	132394418	132394461	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	7	-0.7217
chr14	31371958	31378748	protein_coding	Tkt	exon	ENSMUSG00000021957	ProperStrand	160	chr17	24857716	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-1.7553
chr4	43505712	43505792	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr13	49480362	49480452	protein_coding	Bicd2	utr3	ENSMUSG00000037933	ProperStrand	18	1	-5.3613
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr1	20552542	20552558	protein_coding	Pkhd1	exon	ENSMUSG00000043760	NonProperStrand	49	1	-8.3800
chr11	42440243	42440259	protein_coding	Gabrb2	exon	ENSMUSG00000007653	ProperStrand	248	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-3.2429
chr6	87276494	87276574	protein_coding	Antxr1	intron	ENSMUSG00000033420	NonProperStrand	1	chr19	37185382	37185471	protein_coding	Cpeb3	intron	ENSMUSG00000039652	ProperStrand	8	1	-inf
chr12	4976205	4980830	protein_coding	Atad2b	exon	ENSMUSG00000052812	NonProperStrand	4	chr11	97642973	97643022	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	NonProperStrand	10	1	-19.3291
chr12	88488443	88496424	protein_coding	Pomt2	exon	ENSMUSG00000034126	NonProperStrand	331	chr7	52382627	52382920	protein_coding	Rpl13a	exon	ENSMUSG00000074129	ProperStrand	269	1	-6.9011
chrX	65963902	65963979	protein_coding	Fmr1	intron	ENSMUSG00000000838	ProperStrand	18	chr18	35716772	35716862	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.3552
chr19	10620687	10620703	protein_coding	Cpsf7	utr3	ENSMUSG00000034820	ProperStrand	66	chr7	25782397	25782413	protein_coding	Atp1a3	exon	ENSMUSG00000040907	NonProperStrand	4	1	-18.4376
chr3	96527940	96527956	protein_coding	Polr3c	exon	ENSMUSG00000028099	NonProperStrand	75	chr1	88247816	88247865	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-4.6663
chr10	126718756	126718780	protein_coding	Dctn2	utr3	ENSMUSG00000025410	ProperStrand	42	chr11	48616665	48616706	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	1	-10.0643
chr9	19462406	19462496	LINE	L1Md_A	L1	chr9L1Md_A19461964	NonProperStrand	28	chr14	119638927	119639007	protein_coding	Hs6st3	intron	ENSMUSG00000053465	ProperStrand	15	1	-17.5143
chr17	34020628	34020688	protein_coding	Kifc1	exon	ENSMUSG00000079553	ProperStrand	47	chr5	130300443	130300533	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-5.0980
chr9	65049532	65049597	snRNA	ENSMUSG00000075930_U5	.	ENSMUSG00000075930	ProperStrand	175	chr7	52382753	52382833	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-4.6627
chr9	44598075	44598093	protein_coding	Ift46	intron	ENSMUSG00000002031	NonProperStrand	28	chr12	72000394	72000411	protein_coding	Frmd6	exon	ENSMUSG00000048285	NonProperStrand	3	1	-inf
chr11	48617710	48617790	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	chr17	6946824	6947119	protein_coding	Ezr	exon	ENSMUSG00000052397	ProperStrand	126	17	-19.7942
chr2	90858212	90858286	protein_coding	Celf1	utr3	ENSMUSG00000005506	ProperStrand	61	chr12	81620138	81620155	protein_coding	Galntl1	exon	ENSMUSG00000021130	NonProperStrand	4	1	-18.6662
chr19	5666668	5666684	protein_coding	Pcnxl3	exon	ENSMUSG00000054874	ProperStrand	96	chr11	6428108	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.3697
chr15	82980110	82980225	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr5	130295416	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	3	-1.5494
chr2	31596978	31640082	protein_coding	Abl1	exon	ENSMUSG00000026842	ProperStrand	131	chr4	131908687	131908794	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-1.5530
chr2	163268043	163268061	protein_coding	Gdap1l1	intron	ENSMUSG00000017943	NonProperStrand	30	chr11	98878344	98878371	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-7.6672
chr11	55296215	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	chr17	35088970	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	4	-1.8920
chr12	60145272	60149148	protein_coding	Trappc6b	exon	ENSMUSG00000020993	ProperStrand	6	chr10	80641704	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	1	-12.2982
chr9	78023109	78023165	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr7	16677708	16678201	protein_coding	Zfp541	exon	ENSMUSG00000078796	ProperStrand	33	1	-7.0643
chr17	45706260	45706326	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr4	122968644	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	2	-1.4075
chr18	52638860	52638950	protein_coding	Srfbp1	intron	ENSMUSG00000024528	ProperStrand	9	chr5	130300441	130300521	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-10.1381
chr1	129472961	129472982	protein_coding	Tmem163	intron	ENSMUSG00000026347	NonProperStrand	6	chr2	130102061	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-10.0667
chr7	87458409	87458512	protein_coding	Prc1	utr3	ENSMUSG00000038943	ProperStrand	35	chr1	162967520	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.4897
chr5	130295494	130295537	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	chr7	52382234	52382302	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	2	-1.9095
chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	chr5	115939534	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	8	-18.9815
chr17	35385938	35388291	protein_coding	Ddx39b	exon	ENSMUSG00000019432	ProperStrand	119	chr16	23111373	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	8	-8.2177
chr4	21797544	21798593	protein_coding	Sfrs18	exon	ENSMUSG00000028248	NonProperStrand	26	chr7	74189892	74189909	protein_coding	Adamts17	intron	ENSMUSG00000058145	NonProperStrand	73	1	-14.6075
chr12	101441876	101443860	protein_coding	Calm1	exon	ENSMUSG00000001175	ProperStrand	23	chr4	131826047	131826127	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	1	-11.1569
chr14	99090051	99090071	SINE	ID_B1	B4	chr14ID_B199089986	ProperStrand	12	chr17	35089183	35089229	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-8.7239
chr9	108514079	108516144	protein_coding	Arih2	exon	ENSMUSG00000064145	ProperStrand	9	chr7	88674779	88674859	snoRNA	ENSMUSG00000093107_AC167122.1	.	ENSMUSG00000093107	ProperStrand	110	1	-15.9999
chr7	17040701	17040717	protein_coding	Tmem160	exon	ENSMUSG00000019158	ProperStrand	55	chr10	127997316	127997765	protein_coding	Pa2g4	exon	ENSMUSG00000025364	ProperStrand	72	1	-13.1213
chr17	26644593	26644612	protein_coding	Dusp1	exon	ENSMUSG00000024190	ProperStrand	16	chr8	24556961	24557073	protein_coding	Sfrp1	utr3	ENSMUSG00000031548	ProperStrand	22	4	-20.5867
chr16	23110466	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	chr2	144091712	144091812	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	ProperStrand	549	7	-2.5101
chr8	109942283	109942608	protein_coding	Nob1	exon	ENSMUSG00000003848	ProperStrand	28	chr16	23111372	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-4.3609
chr4	101331221	101331298	protein_coding	Leprot	utr3	ENSMUSG00000035212	ProperStrand	22	chr11	69483134	69483208	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.2846
chr7	134380161	134380261	protein_coding	Zfp553	exon	ENSMUSG00000045598	ProperStrand	7	chr16	23111464	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-5.0992
chr10	62271814	62271886	protein_coding	Tet1	utr3	ENSMUSG00000047146	ProperStrand	286	chr12	17552949	17552993	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	3	-5.9958
chr5	108333615	108333656	snoRNA	ENSMUSG00000064453_Snord21	.	ENSMUSG00000064453	NonProperStrand	1	chr13	22107658	22107696	tRNA	tRNA974-ValAAC	.	1007865	NonProperStrand	1	1	-inf
chr3	89400254	89400272	protein_coding	Kcnn3	intron	ENSMUSG00000000794	ProperStrand	7	chr9	40610156	40610172	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	1	-12.5599
chr17	95160908	95218242	protein_coding	2610044O15Rik	exon	ENSMUSG00000066057	NonProperStrand	70	chr19	8800355	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-5.5696
chr18	10052131	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr17	24856620	24856735	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	5	-10.5908
chr8	42703277	42703367	LINE	L1Md_A	L1	chr8L1Md_A42702591	NonProperStrand	1	chr9	19461986	19462066	LINE	L1Md_A	L1	chr9L1Md_A19461964	NonProperStrand	28	1	-inf
chr4	131908552	131908571	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr2	130103432	130103502	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-2.3111
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr1	153330964	153347925	protein_coding	Rnf2	utr5	ENSMUSG00000026484	ProperStrand	13	3	-19.9254
chr4	131865855	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr1	59761640	59761714	snoRNA	ENSMUSG00000089093_Snord11	.	ENSMUSG00000089093	ProperStrand	193	3	-1.5182
chr2	133378813	133378830	protein_coding	Bmp2	utr5	ENSMUSG00000027358	NonProperStrand	17	chrX	34622906	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-5.5847
chr15	36705265	36706031	protein_coding	Ywhaz	exon	ENSMUSG00000022285	ProperStrand	73	chr11	84634446	84634462	protein_coding	Dhrs11	utr3	ENSMUSG00000034449	NonProperStrand	1	1	-inf
chr1	137993698	137993949	protein_coding	Cacna1s	exon	ENSMUSG00000026407	ProperStrand	7	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-7.8886
chr3	90291659	90291708	protein_coding	Ilf2	utr3	ENSMUSG00000001016	NonProperStrand	2	chr11	69481335	69481434	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	NonProperStrand	24	1	-inf
chr2	117160930	117160983	protein_coding	Rasgrp1	intron	ENSMUSG00000027347	ProperStrand	10	chr10	90581177	90581217	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-8.4049
chr8	74008400	74008417	protein_coding	Ano8	exon	ENSMUSG00000034863	NonProperStrand	171	chr8	73419657	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-2.6616
chr2	165112886	165112940	protein_coding	Slc35c2	intron	ENSMUSG00000017664	ProperStrand	39	chr4	131865911	131865981	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.4732
chr7	38354919	38354935	protein_coding	Zfp536	exon	ENSMUSG00000043456	NonProperStrand	236	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-1.3164
chr8	60437139	60437156	protein_coding	Galntl6	exon	ENSMUSG00000061864	ProperStrand	44	chr9	15119651	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.1801
chr4	131399490	131399506	protein_coding	Mecr	exon	ENSMUSG00000028910	NonProperStrand	109	chr14	76247774	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-5.2885
chr5	122018993	122020646	protein_coding	Aldh2	exon	ENSMUSG00000029455	ProperStrand	108	chr7	118219576	118219656	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-3.0857
chr7	148788253	148790889	protein_coding	Ap2a2	exon	ENSMUSG00000002957	ProperStrand	76	chr3	123210903	123210983	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	6	-11.1631
chr1	43155716	43155732	protein_coding	AI597479	intron	ENSMUSG00000010290	ProperStrand	36	chr10	23506278	23506347	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-7.9685
chr9	50816824	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	chr10	23505152	23505254	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-0.9238
chr1	136214425	136214464	protein_coding	Ppfia4	exon	ENSMUSG00000026458	ProperStrand	45	chr17	68135370	68135428	protein_coding	Lama1	exon	ENSMUSG00000032796	ProperStrand	168	3	-inf
chr10	75400131	75400182	protein_coding	Chchd10	exon	ENSMUSG00000049422	ProperStrand	140	chr3	95980284	95980314	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-5.1947
chr10	23505419	23505463	protein_coding	Rps12	exon	ENSMUSG00000061983	ProperStrand	309	chr10	39978347	39978437	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-2.4268
chr15	78521926	78522006	protein_coding	Elfn2	intron	ENSMUSG00000043460	NonProperStrand	20	chr3	58687933	58688023	protein_coding	Clrn1	intron	ENSMUSG00000043850	ProperStrand	2	2	-inf
chr15	99232045	99232079	protein_coding	Tmbim6	exon	ENSMUSG00000023010	ProperStrand	64	chr8	48633147	48633188	protein_coding	Rwdd4a	exon	ENSMUSG00000031568	ProperStrand	1	1	-inf
chr12	60575476	60575494	LINE	L1_Mus4	L1	chr12L1_Mus460575423	ProperStrand	33	chr11	62418037	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-6.7396
chr4	116883487	116883566	snRNA	ENSMUSG00000070237_U5	.	ENSMUSG00000070237	ProperStrand	154	chr4	131908233	131908295	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-1.5006
chr5	115169677	115169694	protein_coding	Tchp	exon	ENSMUSG00000002486	ProperStrand	19	chr19	8963027	8963085	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.3710
chr5	74489211	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr1	58514677	58514701	protein_coding	Nif3l1	exon	ENSMUSG00000026036	ProperStrand	5	1	-10.7442
chr5	74489217	74489307	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr6	34105109	34105195	protein_coding	Slc35b4	utr3	ENSMUSG00000018999	ProperStrand	11	1	-9.0454
chr11	48617731	48619078	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	chr3	96672353	96672375	protein_coding	Gpr89	utr3	ENSMUSG00000028096	ProperStrand	20	1	-12.0244
chr4	3761707	3761754	protein_coding	Rps20	exon	ENSMUSG00000028234	ProperStrand	71	chr12	106269284	106269384	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	2	-6.4534
chr8	8676902	8676969	protein_coding	Arglu1	intron	ENSMUSG00000040459	ProperStrand	20	chr13	49779749	49779802	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-9.2260
chr18	45020079	45020162	protein_coding	Ythdc2	exon	ENSMUSG00000034653	ProperStrand	9	chr1	162965573	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-7.0004
chr5	120133111	120133157	protein_coding	Tbx3	utr3	ENSMUSG00000018604	ProperStrand	87	chr11	98878371	98878456	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-5.5550
chr2	27381243	27381343	protein_coding	Wdr5	intron	ENSMUSG00000026917	ProperStrand	81	chr4	131908296	131908707	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.8446
chr5	66546245	66546266	lincRNA	Gm16885	intron	ENSMUSG00000086102	ProperStrand	1	chr13	55643075	55643998	protein_coding	Fam193b	exon	ENSMUSG00000021495	ProperStrand	51	1	-inf
chr5	67818385	67818401	protein_coding	Bend4	exon	ENSMUSG00000092060	NonProperStrand	1	chr9	120039546	120039604	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-inf
chr8	72287172	72287188	protein_coding	Zfp866	utr3	ENSMUSG00000043090	NonProperStrand	134	chr4	131908689	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	7	-5.7741
chr17	56847307	56847344	protein_coding	Ranbp3	exon	ENSMUSG00000002372	ProperStrand	34	chr3	123210853	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-7.8151
chr2	24205199	24205215	protein_coding	Il1rn	utr3	ENSMUSG00000026981	ProperStrand	45	chr4	131865855	131865910	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.2312
chr2	73689028	73691923	protein_coding	Atf2	exon	ENSMUSG00000027104	ProperStrand	37	chr10	23505152	23505196	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.9550
chr10	110918551	110918631	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	chr13	96100602	96100693	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	14	-11.3968
chr15	76137566	76137599	protein_coding	Oplah	intron	ENSMUSG00000022562	ProperStrand	20	chr19	8799411	8799433	snoRNA	ENSMUSG00000065280_SNORD28	.	ENSMUSG00000065280	ProperStrand	269	1	-12.5335
chr4	43458235	43458442	protein_coding	Tesk1	exon	ENSMUSG00000028458	ProperStrand	5	chr18	35716845	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-6.9999
chr10	101587054	101587074	protein_coding	Mgat4c	intron	ENSMUSG00000019888	NonProperStrand	3	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	1	-13.3845
chr2	84883131	84884524	protein_coding	Ssrp1	exon	ENSMUSG00000027067	ProperStrand	118	chrX	34622906	34622944	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-2.0108
chr8	40681587	40681603	protein_coding	Msr1	intron	ENSMUSG00000025044	ProperStrand	138	chr6	83303084	83308158	protein_coding	Bola3	exon	ENSMUSG00000045160	ProperStrand	3	1	-18.2665
chr2	33875938	33875956	lincRNA	C230014O12Rik	exon	ENSMUSG00000087461	NonProperStrand	9	chr6	128010926	128010944	protein_coding	Tspan9	intron	ENSMUSG00000030352	ProperStrand	67	1	-16.8976
chr5	124803711	124803811	protein_coding	Cdk2ap1	intron	ENSMUSG00000029394	ProperStrand	22	chr7	98707765	98707782	protein_coding	Dlg2	intron	ENSMUSG00000052572	NonProperStrand	26	1	-17.0169
chr8	73419738	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	chr1	129228390	129228480	snoRNA	ENSMUSG00000093146_AC131793.1	.	ENSMUSG00000093146	ProperStrand	119	1	-1.9609
chr19	54901561	54901577	LTR	ORR1E	MaLR	chr19ORR1E54901466	ProperStrand	1	chr5	120989221	120989280	protein_coding	Tpcn1	exon	ENSMUSG00000032741	ProperStrand	15	1	-inf
chr10	18393547	18393563	protein_coding	D10Bwg1379e	intron	ENSMUSG00000019852	NonProperStrand	120	chr19	42023957	42024012	protein_coding	Mms19	exon	ENSMUSG00000025159	ProperStrand	52	1	-12.2102
chr7	15320561	15320578	LTR	IAPEY3-int	ERVK	chr7IAPEY3-int15320324	ProperStrand	4	chrX	84483699	84483717	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-13.9235
chr1	187153040	187153130	protein_coding	Iars2	exon	ENSMUSG00000026618	ProperStrand	68	chr7	116664815	116664895	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.3360
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr8	107794917	107794933	protein_coding	Hsf4	exon	ENSMUSG00000033249	ProperStrand	11	1	-10.4755
chr2	167836656	167836680	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	chr2	74582202	74582218	protein_coding	Hoxd3	exon	ENSMUSG00000079277	NonProperStrand	14	1	-15.1122
chr10	23505548	23505618	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	chr1	162966813	162966830	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	4	-5.0769
mmu-miR-6240	3	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr4	126704656	126704756	protein_coding	Sfpq	exon	ENSMUSG00000028820	ProperStrand	340	1	-2.6530
chr10	90634047	90634071	protein_coding	Tmpo	utr5	ENSMUSG00000019961	ProperStrand	57	chr4	118954929	118955039	protein_coding	Ybx1	exon	ENSMUSG00000028639	ProperStrand	171	2	-17.4470
chr14	76247980	76248020	protein_coding	Tpt1	utr3	ENSMUSG00000060126	ProperStrand	236	chr19	8799372	8799412	snoRNA	ENSMUSG00000065280_SNORD28	.	ENSMUSG00000065280	ProperStrand	269	1	-7.5703
chr5	86402917	86403007	LINE	L1_Mus1	L1	chr5L1_Mus186398779	NonProperStrand	1	chr16	57284520	57284600	protein_coding	Tmem30c	intron	ENSMUSG00000022753	ProperStrand	1	1	-inf
chr9	62992379	62992395	protein_coding	Skor1	exon	ENSMUSG00000022245	NonProperStrand	70	chr7	52381737	52381758	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-7.2671
chr1	92689614	92689630	protein_coding	Col6a3	exon	ENSMUSG00000048126	ProperStrand	79	chr5	115940337	115940356	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	1	-8.1855
chr2	26283753	26283853	protein_coding	Sec16a	exon	ENSMUSG00000026924	ProperStrand	86	chr7	34918238	34918254	protein_coding	Wtip	utr5	ENSMUSG00000036459	NonProperStrand	9	1	-16.4811
chr4	147385125	147385141	protein_coding	Clcn6	exon	ENSMUSG00000029016	ProperStrand	120	chr4	131865855	131865893	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.8227
chr4	11099797	11099831	protein_coding	Trp53inp1	utr3	ENSMUSG00000028211	ProperStrand	35	chr8	32260335	32260423	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	3	-13.2229
chr7	13516174	13516203	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr10	122467348	122468111	protein_coding	Mon2	exon	ENSMUSG00000034602	NonProperStrand	5	1	-13.8275
chr9	30235085	30235102	protein_coding	Snx19	exon	ENSMUSG00000031993	ProperStrand	353	chr15	98356819	98356901	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	1	-4.2918
chr9	120039253	120039272	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	chr5	108336363	108336460	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-1.5485
chr17	36097994	36098050	protein_coding	Abcf1	exon	ENSMUSG00000038762	ProperStrand	206	chr9	103401280	103401296	protein_coding	Tmem108	exon	ENSMUSG00000042757	NonProperStrand	323	1	-7.4773
chr17	56924087	56924177	protein_coding	Rfx2	exon	ENSMUSG00000024206	ProperStrand	32	chr12	106269367	106269447	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-5.3536
chr3	129527992	129528010	protein_coding	Gar1	utr3	ENSMUSG00000028010	ProperStrand	10	chr2	149657371	149657391	protein_coding	Tmem90b	intron	ENSMUSG00000074736	ProperStrand	5	1	-19.5370
chr2	121886789	121913945	protein_coding	Spg11	exon	ENSMUSG00000033396	ProperStrand	32	chr16	23110833	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.9468
chr8	72613823	72613839	protein_coding	Hapln4	utr3	ENSMUSG00000007594	NonProperStrand	85	chr2	147009105	147009122	protein_coding	Nkx2-2	utr3	ENSMUSG00000027434	NonProperStrand	84	1	-11.9371
chr10	121187426	121187443	protein_coding	BC048403	exon	ENSMUSG00000053684	NonProperStrand	7	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-7.5326
chr3	113827103	113827119	protein_coding	Col11a1	utr3	ENSMUSG00000027966	NonProperStrand	139	chr11	97643012	97643037	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.1776
chr18	75161569	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	chr17	35089181	35089236	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	2	-1.1123
chr19	46726844	46726924	protein_coding	D19Wsu162e	intron	ENSMUSG00000047731	ProperStrand	16	chr17	39985212	39985301	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	2	-13.7292
chr5	8723352	8723414	protein_coding	Abcb1a	intron	ENSMUSG00000040584	ProperStrand	12	chr7	54442972	54443063	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	7	-23.2628
chr1	157040852	157040930	protein_coding	Stx6	intron	ENSMUSG00000026470	ProperStrand	11	chr9	40612858	40612921	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	1	-13.0085
chr17	24858019	24858058	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr5	108334221	108334311	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-1.5974
chr5	24074894	24074968	protein_coding	Abcf2	exon	ENSMUSG00000028953	ProperStrand	50	chr16	23111372	23111462	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.5189
chr5	100855944	100855975	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr14	31829399	31829436	snoRNA	ENSMUSG00000077797_Snord19	.	ENSMUSG00000077797	ProperStrand	62	1	-6.5729
chr1	174492230	174492246	protein_coding	Vsig8	exon	ENSMUSG00000049598	ProperStrand	27	chr16	23110873	23110960	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.1875
chr1	56693389	56693405	protein_coding	Hsfy2	exon	ENSMUSG00000045336	NonProperStrand	1	chr12	112779147	112779204	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-inf
chr18	36925580	36925658	protein_coding	Dnd1	exon	ENSMUSG00000044595	ProperStrand	14	chr18	35102297	35102338	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	7	-inf
chr7	117166722	117166760	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	chr9	15118544	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	1	-1.3682
chr6	86965597	86969360	protein_coding	Nfu1	exon	ENSMUSG00000029993	ProperStrand	12	chr15	79913288	79913341	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-6.7458
chr10	85517996	85518012	protein_coding	Syn3	utr3	ENSMUSG00000059602	NonProperStrand	40	chr13	90238585	90238644	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	1	-9.4622
chr6	118379976	118379994	protein_coding	Zfp248	exon	ENSMUSG00000030145	ProperStrand	19	chr5	121655112	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.9783
chr6	56710944	56711013	protein_coding	Avl9	utr3	ENSMUSG00000029787	ProperStrand	21	chr16	23110455	23110545	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.3878
chr2	90235286	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	82256916	82256932	protein_coding	Tmem132e	exon	ENSMUSG00000020701	ProperStrand	21	1	-6.5250
chr10	14375501	14375532	protein_coding	Vta1	utr3	ENSMUSG00000019868	ProperStrand	12	chr8	74103487	74103503	protein_coding	Slc27a1	exon	ENSMUSG00000031808	NonProperStrand	2	1	-inf
chr2	32563527	32563545	protein_coding	Cdk9	exon	ENSMUSG00000009555	NonProperStrand	49	chr1	162965547	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.6485
chr9	42455513	42455530	protein_coding	Grik4	intron	ENSMUSG00000032017	ProperStrand	32	chr11	106362639	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-8.6656
chr12	68766478	68766510	LINE	L1_Mus2	L1	chr12L1_Mus268766146	ProperStrand	12	chr15	85168450	85168479	protein_coding	Atxn10	intron	ENSMUSG00000016541	ProperStrand	96	1	-15.6517
chrX	39167800	39175629	protein_coding	Thoc2	exon	ENSMUSG00000037475	ProperStrand	30	chr6	125136566	125136646	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	1	-7.8258
chr8	108379202	108379219	protein_coding	Thap11	utr5	ENSMUSG00000036442	ProperStrand	34	chr3	123210893	123210983	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.0438
chr2	125412736	125412762	protein_coding	Cep152	intron	ENSMUSG00000068394	ProperStrand	60	chr14	31827476	31827517	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-6.9447
chr5	149113021	149113038	protein_coding	Mtus2	exon	ENSMUSG00000029651	ProperStrand	114	chr4	131865394	131865439	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-2.8311
chr7	134341340	134341357	protein_coding	Tbc1d10b	utr3	ENSMUSG00000042492	ProperStrand	187	chr4	131865855	131865965	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-0.8927
chr8	129458904	129460942	protein_coding	Tomm20	utr3	ENSMUSG00000058779	ProperStrand	55	chr10	63070812	63070829	protein_coding	Ctnna3	intron	ENSMUSG00000060843	ProperStrand	66	1	-13.2980
chr11	68596726	68596785	protein_coding	Myh10	exon	ENSMUSG00000020900	ProperStrand	91	chr2	4974190	4974207	protein_coding	Optn	exon	ENSMUSG00000026672	ProperStrand	451	1	-8.4403
chr9	110296303	110296331	protein_coding	Ptpn23	exon	ENSMUSG00000036057	ProperStrand	34	chr10	23505152	23505213	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-8.0156
chr11	45723144	45723160	protein_coding	Clint1	utr3	ENSMUSG00000006169	NonProperStrand	273	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	3	-3.4802
chr16	93685339	93690583	protein_coding	Cbr3	exon	ENSMUSG00000022947	ProperStrand	5	chr10	23505150	23505212	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-9.7958
chr13	93125645	93127932	protein_coding	Dhfr	exon	ENSMUSG00000021707	ProperStrand	5	chr2	134897228	134897248	protein_coding	Plcb1	intron	ENSMUSG00000051177	ProperStrand	13	1	-19.9979
chr7	17040701	17040717	protein_coding	Tmem160	exon	ENSMUSG00000019158	ProperStrand	55	chr7	29136525	29136560	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.5130
chr4	155543136	155543176	protein_coding	Agrn	exon	ENSMUSG00000041936	ProperStrand	175	chr16	23111776	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-1.1372
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr8	124066021	124066038	protein_coding	Gm20388	intron	ENSMUSG00000092329	NonProperStrand	203	1	-6.5032
chr12	33802675	33802692	lincRNA	Gm16267	intron	ENSMUSG00000084979	ProperStrand	2	chr4	133276814	133278754	protein_coding	Arid1a	exon	ENSMUSG00000007880	ProperStrand	465	1	-16.6377
chr7	38767965	38768065	protein_coding	C80913	intron	ENSMUSG00000030421	ProperStrand	25	chr1	173041609	173041649	tRNA	tRNA710-ValCAC	.	42360	ProperStrand	206	3	-20.0931
chr11	106927322	106927373	protein_coding	Bptf	exon	ENSMUSG00000040481	ProperStrand	70	chr11	97642979	97643069	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.2124
chr4	101136244	101136375	protein_coding	Ak4	utr3	ENSMUSG00000028527	ProperStrand	20	chr17	71990271	71990296	snoRNA	ENSMUSG00000092887_Snord53	.	ENSMUSG00000092887	ProperStrand	53	1	-15.7761
chr2	118356396	118356486	protein_coding	Bmf	utr3	ENSMUSG00000040093	ProperStrand	53	chr9	15119631	15119712	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-4.9553
chr9	121823892	121823908	protein_coding	Cyp8b1	exon	ENSMUSG00000050445	NonProperStrand	101	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-6.2033
chr11	69753569	69753585	protein_coding	Ybx2	exon	ENSMUSG00000018554	NonProperStrand	1	chr16	11144177	11144277	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	1	-inf
chr6	43422880	43422897	protein_coding	Tpk1	intron	ENSMUSG00000029735	NonProperStrand	4	chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	1	-14.8554
chr4	63389602	63389618	protein_coding	Tnfsf15	utr3	ENSMUSG00000050395	NonProperStrand	121	chr11	106362556	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	2	-9.7734
chr11	120681937	120681995	protein_coding	Fasn	exon	ENSMUSG00000025153	ProperStrand	298	chr7	134671387	134671477	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-4.7266
chr17	13112534	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	chr2	144087414	144087466	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	4	-0.7525
chr10	79325766	79326863	protein_coding	Ptbp1	utr3	ENSMUSG00000006498	ProperStrand	129	chr17	24857719	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	6	-8.6510
chr11	6299552	6300821	protein_coding	Zmiz2	exon	ENSMUSG00000041164	ProperStrand	69	chr9	15119701	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-4.2367
chr1	33828651	33828669	protein_coding	Zfp451	intron	ENSMUSG00000042197	NonProperStrand	393	chr2	145076803	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-4.0611
chr13	8766500	8766600	protein_coding	Adarb2	utr3	ENSMUSG00000052551	NonProperStrand	61	chr11	97642952	97643000	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.4435
chrX	103397793	103397883	protein_coding	Pgk1	exon	ENSMUSG00000062070	ProperStrand	484	chr2	26768393	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	2	-3.3129
chr4	115616754	115616774	Low_complexity	GC_rich	Low_complexity	chr4GC_rich115616747	ProperStrand	1	chrX	19683228	19683244	protein_coding	Slc9a7	exon	ENSMUSG00000037341	NonProperStrand	136	1	-inf
chr5	93384378	93384394	protein_coding	Shroom3	exon	ENSMUSG00000029381	ProperStrand	52	chr8	73419675	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	4	-11.4412
chr19	47588400	47590608	protein_coding	Obfc1	exon	ENSMUSG00000042694	NonProperStrand	8	chr16	23110966	23111010	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	NonProperStrand	93	3	-18.9092
chr11	120486262	120486278	protein_coding	Sirt7	exon	ENSMUSG00000025138	ProperStrand	1	chr1	82685752	82685772	protein_coding	Col4a3	exon	ENSMUSG00000079465	NonProperStrand	1	1	-inf
chr11	74718931	74718962	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	chr18	35714154	35714244	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	7	-5.7958
chr13	9833573	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr7	29692032	29697300	protein_coding	Actn4	exon	ENSMUSG00000054808	ProperStrand	120	1	-3.6415
chr8	113362430	113362490	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	chr5	130300419	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-0.7380
chr17	46861595	46861611	protein_coding	Pex6	exon	ENSMUSG00000002763	ProperStrand	292	chr4	116827412	116827667	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	1	-7.2009
chr10	128010525	128011426	protein_coding	Erbb3	exon	ENSMUSG00000018166	ProperStrand	49	chr13	113368541	113368563	protein_coding	Il31ra	intron	ENSMUSG00000050377	ProperStrand	583	5	-inf
chr5	115940307	115940407	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	chr7	52382753	52382800	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-2.4473
chr1	71675932	71675994	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr7	4745142	4745210	protein_coding	Rpl28	exon	ENSMUSG00000030432	ProperStrand	220	3	-12.3041
chr2	20719593	20719627	protein_coding	Etl4	exon	ENSMUSG00000036617	ProperStrand	86	chr17	13112532	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-3.8978
chr4	130490465	130490481	protein_coding	Laptm5	utr3	ENSMUSG00000028581	NonProperStrand	8	chr16	23111703	23111827	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-17.9752
chr11	51413286	51417903	protein_coding	Hnrnpab	exon	ENSMUSG00000020358	ProperStrand	124	chr7	116663633	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	8	-14.1471
chr16	35768924	35768942	protein_coding	Dirc2	intron	ENSMUSG00000022848	ProperStrand	17	chr4	131908410	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.5556
chr1	121458185	121458202	protein_coding	Epb4.1l5	intron	ENSMUSG00000026383	NonProperStrand	28	chr3	123210913	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.3984
chr18	73693110	73693189	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr9	64143736	64143826	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	4	-4.0304
chr5	109124122	109132306	protein_coding	Fgfrl1	exon	ENSMUSG00000008090	ProperStrand	111	chr10	80640500	80640528	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-4.8997
chr10	104351987	104352007	Other	RMER1A	Other	chr10RMER1A104351322	ProperStrand	15	chr14	33005095	33005138	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-6.7159
chr10	77494632	77497151	protein_coding	Aire	exon	ENSMUSG00000000731	ProperStrand	8	chr10	84849621	84849637	protein_coding	Btbd11	utr5	ENSMUSG00000020042	NonProperStrand	8	1	-18.6452
chr6	38768809	38768865	protein_coding	Hipk2	exon	ENSMUSG00000061436	NonProperStrand	4	chr3	123210854	123210897	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	NonProperStrand	45	1	-18.7780
chr11	99885311	99885327	protein_coding	Krt33b	exon	ENSMUSG00000057723	NonProperStrand	352	chr11	83107805	83107884	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	1	-5.3392
chr10	89282305	89282321	protein_coding	Uhrf1bp1l	utr3	ENSMUSG00000019951	NonProperStrand	55	chr5	121655016	121655128	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	3	-9.5717
chr8	24367265	24367494	protein_coding	Golga7	utr5	ENSMUSG00000015341	ProperStrand	36	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-8.7524
chr11	6519821	6519921	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	chr11	62418037	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-0.9484
chr16	11144186	11144276	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr19	8963022	8963195	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	5	-19.9684
chr12	17552059	17552159	protein_coding	Odc1	intron	ENSMUSG00000011179	ProperStrand	173	chr9	15119733	15119768	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.0139
chr8	13479055	13483693	protein_coding	Gas6	exon	ENSMUSG00000031451	ProperStrand	27	chr1	162965981	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	3	-12.1440
chrX	101491182	101491198	protein_coding	Abcb7	exon	ENSMUSG00000031333	ProperStrand	22	chr1	88252835	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-8.6544
chr16	72737721	72933997	protein_coding	Robo1	intron	ENSMUSG00000022883	ProperStrand	47	chr16	23111697	23111788	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	9	-inf
chr18	61748094	61748139	protein_coding	Csnk1a1	utr3	ENSMUSG00000024576	ProperStrand	64	chr7	112629988	112630005	protein_coding	Prkcdbp	intron	ENSMUSG00000037060	NonProperStrand	43	1	-13.8561
chr7	117166723	117166858	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	chr17	35299502	35299600	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	14	-2.5424
chr2	179908652	179908700	protein_coding	Adrm1	exon	ENSMUSG00000039041	ProperStrand	27	chr16	23110474	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.9061
chr9	49373055	49373089	protein_coding	Ncam1	exon	ENSMUSG00000039542	ProperStrand	18	chr14	76245449	76246017	protein_coding	Tpt1	exon	ENSMUSG00000060126	ProperStrand	236	1	-13.0105
chr7	108440949	108440967	protein_coding	Atg16l2	intron	ENSMUSG00000047767	ProperStrand	121	chr19	8800375	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	4	-8.4167
chr3	48852393	48852473	LINE	L1Md_F2	L1	chr3L1Md_F248852315	ProperStrand	1	chr7	54443928	54444018	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-inf
chr19	25484358	25484374	protein_coding	Kank1	exon	ENSMUSG00000032702	ProperStrand	218	chr16	23111689	23111811	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-1.4379
chrX	147520757	147521121	protein_coding	Fgd1	exon	ENSMUSG00000025265	ProperStrand	96	chr2	158185530	158185579	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-5.5621
chr17	39979953	39980013	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr5	142459850	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	1	-4.5963
chr1	65205790	65205830	protein_coding	Idh1	utr3	ENSMUSG00000025950	ProperStrand	17	chr19	8798739	8798795	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-7.3031
chr9	70960076	70960093	protein_coding	Aqp9	exon	ENSMUSG00000032204	NonProperStrand	118	chr2	26494708	26494781	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.9536
chr11	77350931	77350960	protein_coding	Taok1	utr3	ENSMUSG00000017291	ProperStrand	41	chr4	131865381	131865471	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	13	-inf
chr2	173910102	173910192	protein_coding	Stx16	utr5	ENSMUSG00000027522	ProperStrand	18	chr4	131908332	131908412	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.4481
chr11	71856746	71856763	protein_coding	Fam64a	exon	ENSMUSG00000020808	NonProperStrand	19	chr14	33005085	33005139	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-6.2373
chr5	67066830	67066846	antisense	Gm16832	.	ENSMUSG00000087601	ProperStrand	8	chr15	79908957	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-9.5642
chr3	105754541	105754574	protein_coding	Atp5f1	exon	ENSMUSG00000000563	ProperStrand	28	chr16	23110530	23110578	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	4	-12.7417
chr2	162905412	162905431	protein_coding	Mybl2	exon	ENSMUSG00000017861	ProperStrand	230	chr8	73419729	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-1.0138
chr4	131865856	131865936	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr6	125071789	125071879	snoRNA	ENSMUSG00000088208_SCARNA11	.	ENSMUSG00000088208	ProperStrand	113	1	-0.8928
chr19	37415594	37415619	SINE	ID_B1	B4	chr19ID_B137415477	ProperStrand	3	chr17	24858084	24858150	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	3	-inf
chr8	87393111	87393146	protein_coding	Farsa	utr3	ENSMUSG00000003808	ProperStrand	21	chr9	15119684	15119731	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.5745
chr16	39609963	39610053	LINE	Lx5	L1	chr16Lx539609571	ProperStrand	1	chr9	39523502	39523582	LINE	Lx5	L1	chr9Lx539523501	ProperStrand	1	1	-inf
chr16	14458023	14458039	protein_coding	Abcc1	utr5	ENSMUSG00000023088	ProperStrand	35	chr15	34370588	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-4.5674
chr2	90235294	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	54379743	54379760	lincRNA	9130019P16Rik	exon	ENSMUSG00000073067	ProperStrand	255	2	-3.4366
chr19	44188368	44188458	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr6	57638553	57638569	protein_coding	Pigy	utr3	ENSMUSG00000043162	NonProperStrand	18	3	-19.4633
chr7	25397593	25397611	protein_coding	Phldb3	exon	ENSMUSG00000074277	ProperStrand	25	chr16	23110828	23110866	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.2939
chr4	138984007	138984060	protein_coding	Ubr4	exon	ENSMUSG00000066036	ProperStrand	304	chr6	125136423	125136523	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	2	-5.6925
chr14	76907312	76907373	protein_coding	Tsc22d1	utr3	ENSMUSG00000022010	ProperStrand	86	chr2	26767764	26767793	snoRNA	ENSMUSG00000064829_SNORD36	.	ENSMUSG00000064829	ProperStrand	98	1	-11.6040
chr2	70927899	70927915	protein_coding	Dcaf17	exon	ENSMUSG00000041966	NonProperStrand	89	chr19	8963032	8963048	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-9.3643
chr2	27391830	27391877	protein_coding	Wdr5	utr3	ENSMUSG00000026917	ProperStrand	81	chr4	45298354	45298417	protein_coding	Frmpd1	exon	ENSMUSG00000035615	ProperStrand	4	1	-18.5569
chr4	131908231	131908269	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr1	138008563	138009492	protein_coding	Cacna1s	exon	ENSMUSG00000026407	ProperStrand	7	1	-11.6713
chr19	44380966	44381066	protein_coding	Scd2	utr3	ENSMUSG00000025203	ProperStrand	219	chr15	98350146	98350173	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-2.3961
chr13	6585754	6585812	protein_coding	Pfkp	exon	ENSMUSG00000021196	ProperStrand	197	chr12	17552969	17553069	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-2.8731
chr13	113693653	113693695	protein_coding	Skiv2l2	exon	ENSMUSG00000016018	ProperStrand	55	chr4	131908688	131908867	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	6	-9.7474
chr7	3657394	3657482	protein_coding	Rps9	exon	ENSMUSG00000006333	ProperStrand	87	chr12	112779251	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-4.0681
chr2	26493456	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr1	40053934	40053950	protein_coding	Map4k4	exon	ENSMUSG00000026074	ProperStrand	348	1	-2.8715
chr19	30622120	30622139	protein_coding	Dkk1	exon	ENSMUSG00000024868	NonProperStrand	3	chr7	116663659	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-inf
chr6	124761238	124761314	protein_coding	Tpi1	utr3	ENSMUSG00000023456	ProperStrand	94	chr9	15119665	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.8844
chrX	71589885	71589904	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr1	92698923	92698940	protein_coding	Col6a3	exon	ENSMUSG00000048126	NonProperStrand	44	1	-10.7736
chr13	54764868	54764948	protein_coding	Faf2	utr3	ENSMUSG00000025873	ProperStrand	90	chr5	121655036	121655126	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.0079
chr5	74489202	74489267	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr15	10965488	10965504	protein_coding	Rxfp3	utr3	ENSMUSG00000060735	ProperStrand	37	1	-6.5769
chr13	74468891	74469561	protein_coding	Sdha	exon	ENSMUSG00000021577	ProperStrand	70	chr17	35087894	35087946	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-4.9015
chr6	120959097	120959118	protein_coding	Mical3	exon	ENSMUSG00000003178	ProperStrand	9	chr4	82579833	82579850	protein_coding	Frem1	intron	ENSMUSG00000059049	ProperStrand	11	1	-19.2632
chr7	133938919	133940853	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	chr1	162967489	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	8	-5.0110
chr11	97642949	97643073	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	chr3	85942714	85942780	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	4	-1.7815
chr9	78023109	78023189	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr2	157109397	157109425	protein_coding	Rpn2	exon	ENSMUSG00000027642	ProperStrand	363	1	-2.5181
chr8	106942360	106942376	protein_coding	Dync1li2	utr3	ENSMUSG00000035770	ProperStrand	75	chr12	17552964	17553030	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-4.6587
chr5	136707644	136707662	protein_coding	Sh2b2	exon	ENSMUSG00000005057	NonProperStrand	101	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-5.9545
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr7	116663634	116663767	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	8	-8.3873
chr11	5441763	5441781	protein_coding	Ccdc117	intron	ENSMUSG00000020482	NonProperStrand	20	chr18	33954877	33954939	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-9.2370
chr19	3602406	3622568	protein_coding	Lrp5	exon	ENSMUSG00000024913	ProperStrand	145	chr3	123210854	123210979	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-1.6720
chr13	23831056	23831077	protein_coding	Hist1h1c	exon	ENSMUSG00000036181	ProperStrand	99	chr16	18240811	18240890	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	1	-8.1236
chr8	72613929	72613951	protein_coding	Hapln4	utr3	ENSMUSG00000007594	ProperStrand	5	chr4	131908722	131908812	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.7672
chr5	108334195	108334241	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	chr7	51505507	51505591	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	1	-0.9967
chr15	93177115	93177133	LTR	RMER15	ERVL	chr15RMER1593176995	ProperStrand	2	chr12	17552949	17553033	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	2	-inf
chr16	90958069	90958103	protein_coding	Synj1	intron	ENSMUSG00000022973	ProperStrand	16	chr1	71698146	71698207	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	2	-16.6472
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr4	137024778	137115015	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	3	-4.6463
chr17	56452308	56452388	protein_coding	Uhrf1	exon	ENSMUSG00000001228	ProperStrand	229	chr13	29417914	29418004	protein_coding	Cdkal1	exon	ENSMUSG00000006191	ProperStrand	43	1	-11.2994
chr5	151755616	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr10	110918564	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	6	-1.7662
chr16	75761550	75765200	protein_coding	Hspa13	exon	ENSMUSG00000032932	NonProperStrand	57	chr7	52378398	52378448	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	1	-8.6070
chr15	45130789	45130810	LINE	L1_Mus2	L1	chr15L1_Mus245129537	NonProperStrand	17	chr12	54828630	54828647	protein_coding	Npas3	intron	ENSMUSG00000021010	NonProperStrand	29	1	-17.4290
chr8	86535304	86535320	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	chr16	23111372	23111491	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-1.2654
chr14	35157018	35157118	protein_coding	Glud1	utr3	ENSMUSG00000021794	ProperStrand	72	chr7	116663689	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.2046
chr6	34708001	34708081	protein_coding	Cald1	exon	ENSMUSG00000029761	ProperStrand	19	chr10	110918592	110918682	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-5.6609
chr11	50108591	50139067	protein_coding	Canx	exon	ENSMUSG00000020368	ProperStrand	296	chr16	23110828	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	12	-0.8161
chr11	99076449	99076465	protein_coding	Smarce1	exon	ENSMUSG00000037935	NonProperStrand	8	chr6	71832629	71832667	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-9.7064
chr19	5274912	5274928	protein_coding	Sf3b2	exon	ENSMUSG00000024853	ProperStrand	102	chr2	91436228	91436305	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-6.4449
chr9	24549624	24549658	protein_coding	Tbx20	intron	ENSMUSG00000031965	NonProperStrand	110	chr19	8798756	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	2	-6.1876
chr10	20080841	20080859	protein_coding	Fam54a	utr3	ENSMUSG00000019992	ProperStrand	232	chr8	87543709	87548092	protein_coding	Asna1	exon	ENSMUSG00000052456	ProperStrand	25	1	-12.3726
chr5	145532202	145532378	protein_coding	Trrap	intron	ENSMUSG00000045482	ProperStrand	399	chrX	34622906	34623001	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-1.0078
chr12	88778632	88778722	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	chr19	8799581	8799644	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-0.8151
chr4	141094180	141094196	protein_coding	Spen	utr5	ENSMUSG00000040761	ProperStrand	161	chr6	115758006	115758132	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-3.5927
chr19	8799835	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	chr11	69482354	69482405	snoRNA	ENSMUSG00000089542_snoU6-77	.	ENSMUSG00000089542	ProperStrand	138	4	-11.3197
chr7	24713726	24713742	protein_coding	Vmn1r179	exon	ENSMUSG00000046924	NonProperStrand	69	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-8.6466
chr9	48609015	48609036	protein_coding	Zbtb16	intron	ENSMUSG00000066687	NonProperStrand	4	chr17	35087895	35087946	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-10.8192
chr4	83938091	83938107	protein_coding	Bnc2	exon	ENSMUSG00000028487	ProperStrand	76	chrX	71194696	71194756	protein_coding	Hcfc1	exon	ENSMUSG00000031386	ProperStrand	424	1	-8.9234
chr9	37350308	37351600	protein_coding	Vsig2	exon	ENSMUSG00000001943	NonProperStrand	1	chrX	147501615	147501715	protein_coding	Fgd1	exon	ENSMUSG00000025265	NonProperStrand	9	1	-inf
chr12	101654830	101654920	protein_coding	Ttc7b	intron	ENSMUSG00000033530	ProperStrand	49	chr11	97643011	97643091	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.8235
chr11	96146302	96146318	protein_coding	Hoxb7	utr5	ENSMUSG00000038721	NonProperStrand	7	chr14	33005139	33005226	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-8.3069
chr1	134401815	134401915	protein_coding	Rbbp5	utr3	ENSMUSG00000026439	ProperStrand	22	chr16	23110911	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.4786
chr11	35640041	35640918	protein_coding	Rars	exon	ENSMUSG00000018848	ProperStrand	18	chr3	136428529	136428546	protein_coding	Ppp3ca	intron	ENSMUSG00000028161	NonProperStrand	120	1	-14.3643
chr5	135096009	135096076	protein_coding	Eif4h	utr3	ENSMUSG00000040731	ProperStrand	46	chr16	23111697	23111787	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.3385
chr19	6348067	6348147	protein_coding	Map4k2	intron	ENSMUSG00000024948	NonProperStrand	2	chr5	139723437	139723527	protein_coding	Sun1	intron	ENSMUSG00000036817	ProperStrand	108	1	-19.1058
chr11	32635308	32635326	protein_coding	Fbxw11	exon	ENSMUSG00000020271	NonProperStrand	31	chr18	35714143	35714262	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	6	-20.5346
chr17	45529993	45530093	protein_coding	Cdc5l	exon	ENSMUSG00000023932	ProperStrand	59	chr11	120824445	120824469	protein_coding	Csnk1d	utr3	ENSMUSG00000025162	ProperStrand	37	5	-19.4694
chr13	99625138	99625309	protein_coding	Tnpo1	exon	ENSMUSG00000009470	ProperStrand	56	chr12	88778642	88778722	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-6.6344
chrX	45977205	45977221	protein_coding	Slc25a14	utr5	ENSMUSG00000031105	NonProperStrand	3	chr11	101304818	101304879	protein_coding	Rpl27	exon	ENSMUSG00000063316	ProperStrand	96	1	-18.7103
chr17	56753369	56753459	protein_coding	Rpl36	exon	ENSMUSG00000057863	ProperStrand	62	chr10	110918579	110918659	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-3.3886
chr2	119642778	119643781	protein_coding	Tyro3	utr3	ENSMUSG00000027298	ProperStrand	35	chr4	131908236	131908426	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-4.0554
chr5	151593192	151594712	protein_coding	Pds5b	exon	ENSMUSG00000034021	ProperStrand	21	chr11	69481334	69481378	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.1963
chr19	8798740	8798776	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	chr5	92485086	92485159	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	1	-0.9592
chr1	183751566	183751646	protein_coding	Lbr	exon	ENSMUSG00000004880	ProperStrand	97	chr2	26493383	26493473	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-2.8703
chr11	102294588	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr10	110918549	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-0.7683
chrX	162824185	162824201	protein_coding	Gpm6b	utr3	ENSMUSG00000031342	ProperStrand	4	chr11	69483195	69483268	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-7.8378
chr11	111221962	111221981	SINE	B3A	B2	chr11B3A111221895	NonProperStrand	1	chr8	126493276	126493363	protein_coding	Abcb10	intron	ENSMUSG00000031974	ProperStrand	13	1	-inf
chr4	132102468	132102550	protein_coding	Dnajc8	intron	ENSMUSG00000054405	ProperStrand	22	chr18	35716830	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.9687
chr14	87659491	87659512	LTR	MTEa	MaLR	chr14MTEa87659331	NonProperStrand	83	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-8.2772
chr4	149119018	149119035	protein_coding	Slc25a33	exon	ENSMUSG00000028982	ProperStrand	7	chr2	26493374	26493421	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-8.0386
chr6	28473789	28824977	protein_coding	Snd1	exon	ENSMUSG00000001424	ProperStrand	210	chr19	8963040	8963174	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-1.2168
chr17	26751702	26751792	protein_coding	Ergic1	intron	ENSMUSG00000001576	ProperStrand	114	chr1	145998775	145998865	protein_coding	Rgs13	intron	ENSMUSG00000051079	ProperStrand	2	1	-20.8143
chrX	136242613	136242631	protein_coding	Tbc1d8b	intron	ENSMUSG00000042473	NonProperStrand	27	chr11	62416598	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-10.9130
chr15	98675165	98675255	protein_coding	Mll2	exon	ENSMUSG00000048154	ProperStrand	170	chr11	69481335	69481415	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-1.4765
chr7	135020868	135020932	protein_coding	Zfp646	intron	ENSMUSG00000049739	ProperStrand	29	chr11	62416621	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-6.6005
chr9	21599346	21599436	protein_coding	Kank2	exon	ENSMUSG00000032194	ProperStrand	196	chr5	130300417	130300497	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-0.7827
chr11	120674822	120675005	protein_coding	Fasn	exon	ENSMUSG00000025153	ProperStrand	298	chr7	150717298	150717364	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-2.5296
chr16	96264654	96264672	protein_coding	Brwd1	exon	ENSMUSG00000022914	ProperStrand	77	chr5	81663451	81663474	protein_coding	Lphn3	intron	ENSMUSG00000037605	NonProperStrand	39	1	-13.6788
chr2	156500660	156500747	protein_coding	Dlgap4	intron	ENSMUSG00000061689	ProperStrand	80	chr7	29136526	29136600	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.8942
chr2	75503091	75503144	protein_coding	Hnrnpa3	exon	ENSMUSG00000059005	ProperStrand	289	chr2	130102028	130102088	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	3	-6.4563
chr3	136526736	136526753	protein_coding	Ppp3ca	intron	ENSMUSG00000028161	NonProperStrand	120	chr5	121655099	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.5058
chr11	106109359	106109397	protein_coding	Ddx42	exon	ENSMUSG00000020705	NonProperStrand	5	chr15	99016488	99029686	protein_coding	Spats2	exon	ENSMUSG00000051934	ProperStrand	71	4	-21.2326
chr9	44935390	44935480	protein_coding	Scn2b	utr3	ENSMUSG00000070304	ProperStrand	2	chr2	26493417	26493497	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-11.0703
chr15	81749709	81749770	protein_coding	Polr3h	intron	ENSMUSG00000022476	ProperStrand	11	chr11	97641500	97641590	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	1	-11.3126
chr8	59991939	59992162	protein_coding	Hmgb2	exon	ENSMUSG00000054717	ProperStrand	184	chr13	96100555	96100692	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	23	-20.7253
chr2	90235314	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	116550458	116550474	protein_coding	Zswim5	exon	ENSMUSG00000033948	ProperStrand	10	1	-8.0457
chr16	85280907	85280924	LINE	L1M5	L1	chr16L1M585280779	NonProperStrand	30	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.4908
chr8	108233712	108233730	protein_coding	4933405L10Rik	exon	ENSMUSG00000013158	ProperStrand	94	chr10	86221857	86221873	protein_coding	BC030307	exon	ENSMUSG00000044937	ProperStrand	77	1	-11.9097
chr1	34219869	34219969	protein_coding	Dst	exon	ENSMUSG00000026131	ProperStrand	461	chr3	152450608	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	1	-4.7893
chr18	52854064	52854081	protein_coding	Gykl1	exon	ENSMUSG00000053624	ProperStrand	18	chrX	34622906	34622997	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	5	-19.5677
chr11	51813898	51813915	protein_coding	Ube2b	utr5	ENSMUSG00000020390	ProperStrand	57	chr2	125499562	125499579	protein_coding	Eid1	utr3	ENSMUSG00000091337	ProperStrand	60	1	-13.4194
chr5	14252800	14252816	protein_coding	Sema3e	utr3	ENSMUSG00000063531	ProperStrand	125	chr3	123210907	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-0.9995
chr2	180451743	180452568	protein_coding	2310003C23Rik	exon	ENSMUSG00000027573	ProperStrand	25	chr7	148634701	148634791	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-5.6811
chr14	56389353	56390228	protein_coding	Adcy4	exon	ENSMUSG00000022220	ProperStrand	29	chr5	115939530	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-9.3280
chr14	47948933	47948949	LTR	RMER17A2	ERVK	chr14RMER17A247948307	NonProperStrand	43	chr15	79912979	79913000	protein_coding	Rpl3	exon	ENSMUSG00000060036	ProperStrand	8342	1	-4.2175
chr15	75726288	75726694	protein_coding	Eef1d	exon	ENSMUSG00000055762	ProperStrand	99	chr7	148634702	148634782	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-3.0659
chr15	68769294	68769312	protein_coding	Khdrbs3	intron	ENSMUSG00000022332	NonProperStrand	5	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-11.7344
chr7	130324898	130324935	protein_coding	Tnrc6a	exon	ENSMUSG00000052707	ProperStrand	37	chr5	108336363	108336409	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-9.5122
chrX	130496426	130496668	protein_coding	Sytl4	exon	ENSMUSG00000031255	ProperStrand	169	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-4.5737
chr6	82688297	82688353	protein_coding	Hk2	exon	ENSMUSG00000000628	ProperStrand	88	chr13	78220877	78220894	protein_coding	Fam172a	intron	ENSMUSG00000064138	NonProperStrand	9	1	-16.3943
chr8	72810032	72810053	protein_coding-noncoding	Homer3	utr5	ENSMUSG00000003573	ProperStrand	1	chr2	130102056	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-inf
chr19	56612797	56612851	protein_coding	Dclre1a	exon	ENSMUSG00000025077	ProperStrand	3	chr19	8799022	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-12.1627
chr3	8866786	8866805	protein_coding	Mrps28	intron	ENSMUSG00000040269	NonProperStrand	11	chr6	30688895	30688957	protein_coding	Mest	intron	ENSMUSG00000051855	ProperStrand	11	1	-19.3304
chr2	90235297	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	75406590	75406606	protein_coding	Speg	exon	ENSMUSG00000026207	NonProperStrand	11	1	-7.8469
chr15	103023473	103023556	protein_coding	Cbx5	utr3	ENSMUSG00000009575	ProperStrand	98	chr11	116535950	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	1	-4.9547
chr2	22444407	22444459	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	chr7	86611350	86611377	tRNA	tRNA387-ArgTCG	.	796731	ProperStrand	77	1	-7.2794
chr2	157119950	157120991	protein_coding	Rpn2	exon	ENSMUSG00000027642	ProperStrand	363	chr1	89263875	89263901	protein_coding	Gigyf2	intron	ENSMUSG00000048000	ProperStrand	128	1	-8.1913
chr6	89058029	89058079	protein_coding	4933427D06Rik	exon	ENSMUSG00000055403	ProperStrand	12	chr19	8800423	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	3	-15.5115
chr9	64034033	64034123	protein_coding	Map2k1	utr3	ENSMUSG00000004936	ProperStrand	36	chr2	26493369	26493449	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-4.7133
chr8	119098856	119098886	protein_coding	Cdyl2	utr3	ENSMUSG00000031758	ProperStrand	35	chr11	69483195	69483249	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.4080
chr10	127520966	127527147	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr5	108334221	108336490	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	2	-1.8473
chr18	10458667	10458720	protein_coding	Greb1l	exon	ENSMUSG00000042942	ProperStrand	23	chr2	26494708	26494808	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.9167
chr2	90235294	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr3	121162518	121162535	protein_coding	Slc44a3	utr3	ENSMUSG00000039865	NonProperStrand	5	1	-9.5409
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr14	87659491	87659512	LTR	MTEa	MaLR	chr14MTEa87659331	NonProperStrand	83	2	-6.4896
chr4	155323737	155323807	protein_coding	Ube2j2	intron	ENSMUSG00000023286	ProperStrand	35	chr8	97384379	97385613	protein_coding	Polr2c	exon	ENSMUSG00000031783	ProperStrand	16	4	-20.7607
chr13	8766291	8766308	protein_coding	Adarb2	utr3	ENSMUSG00000052551	ProperStrand	292	chr1	162965528	162965564	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-0.8250
chr13	73799267	73799357	protein_coding	Slc6a18	utr3	ENSMUSG00000021612	ProperStrand	4	chr11	117923702	117923782	protein_coding	Dnahc17	intron	ENSMUSG00000033987	NonProperStrand	20	1	-19.5488
chr12	101444398	101444621	protein_coding	Calm1	exon	ENSMUSG00000001175	ProperStrand	23	chr4	131908235	131908335	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-5.2237
chr1	136997516	136997573	protein_coding	Lgr6	intron	ENSMUSG00000042793	ProperStrand	5	chr1	162965984	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-8.6249
chr6	113065062	113065590	protein_coding	Setd5	exon	ENSMUSG00000034269	ProperStrand	162	chr13	51743598	51743688	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-4.9157
chr7	119196850	119196912	protein_coding	Usp47	exon	ENSMUSG00000059263	ProperStrand	40	chr7	150717298	150717366	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	4	-20.1001
chr2	130103751	130103811	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	chr11	69483136	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	25	-20.5893
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr2	38012954	38012970	protein_coding	Dennd1a	intron	ENSMUSG00000035392	NonProperStrand	128	1	-6.2928
chr16	49183076	49183094	protein_coding	Myh15	exon	ENSMUSG00000092009	NonProperStrand	7	chr14	33005138	33005235	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	6	-19.5735
chr15	85637805	85637821	protein_coding	2210021J22Rik	utr3	ENSMUSG00000064284	ProperStrand	16	chr3	108357334	108357424	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	15	-20.4168
chr6	142912168	142912259	protein_coding	St8sia1	exon	ENSMUSG00000030283	ProperStrand	42	chr9	15119715	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	5	-14.2411
chr9	39358287	39358304	protein_coding	Olfr958	exon	ENSMUSG00000050853	NonProperStrand	266	chr7	16524110	16524219	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	1	-6.7522
chr2	170322357	170322374	protein_coding	Pfdn4	intron	ENSMUSG00000052033	ProperStrand	55	chr5	108336377	108336408	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-5.0494
chr19	5733729	5733747	SINE	B3	B2	chr19B35733606	ProperStrand	1	chr7	116663712	116663758	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-inf
chr9	15119967	15120039	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	chr2	26768390	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	3	-2.1412
chr9	26896111	26896136	protein_coding	Ncapd3	exon	ENSMUSG00000035024	ProperStrand	16	chr2	31924012	31924028	protein_coding	Fam78a	utr3	ENSMUSG00000050592	NonProperStrand	340	1	-12.5242
chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr1	63225577	63225669	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	5	-5.0797
chr11	101436534	101436598	protein_coding	Nbr1	exon	ENSMUSG00000017119	ProperStrand	91	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-8.1460
chr11	97642952	97643009	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	chr4	86232361	86232487	snoRNA	ENSMUSG00000088958_Scarna8	.	ENSMUSG00000088958	ProperStrand	366	4	-1.7430
chr8	108479374	108479563	protein_coding	Slc12a4	exon	ENSMUSG00000017765	ProperStrand	25	chrX	98600442	98600532	protein_coding	Zmym3	utr3	ENSMUSG00000031310	ProperStrand	17	1	-17.6183
chr4	122968662	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	chr11	116533822	116533890	snoRNA	ENSMUSG00000065640_Snord1c	.	ENSMUSG00000065640	ProperStrand	373	1	-2.8270
chr9	67182089	67186074	protein_coding	Tln2	exon	ENSMUSG00000052698	ProperStrand	79	chr4	131908809	131908896	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-1.7676
chr17	85125895	85125961	protein_coding	Lrpprc	exon	ENSMUSG00000024120	ProperStrand	98	chr5	108998805	108998840	protein_coding	Gak	utr3	ENSMUSG00000062234	ProperStrand	33	3	-19.3186
chr1	194571836	194571878	snRNA	ENSMUSG00000064881_U5	.	ENSMUSG00000064881	ProperStrand	187	chr11	74718981	74719007	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	1	-6.7626
chr18	10644903	10644993	protein_coding	Abhd3	utr3	ENSMUSG00000002475	ProperStrand	6	chr4	131865417	131865497	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-8.6503
chr5	108514955	108514972	protein_coding	Mtf2	intron	ENSMUSG00000029267	NonProperStrand	1	chr7	135883660	135883687	protein_coding	Mcmbp	exon	ENSMUSG00000048170	ProperStrand	87	1	-inf
chr8	125074922	125075012	protein_coding	Fam38a	utr5	ENSMUSG00000014444	ProperStrand	132	chr17	35299553	35299633	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-3.2986
chr11	97023157	97023188	protein_coding	Kpnb1	utr3	ENSMUSG00000001440	ProperStrand	197	chr4	131865381	131865471	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-1.9148
chr7	129308943	129308983	protein_coding	Plk1	intron	ENSMUSG00000030867	ProperStrand	146	chr1	3661500	3661517	protein_coding	Xkr4	utr5	ENSMUSG00000051951	ProperStrand	59	1	-11.5623
chr17	24839130	24839220	protein_coding	Tbl3	exon	ENSMUSG00000040688	ProperStrand	42	chr7	29136575	29136655	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.9861
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr14	47434424	47434440	protein_coding	Gmfb	intron	ENSMUSG00000062014	NonProperStrand	1	1	-inf
chr11	80056917	80056942	protein_coding	Rhot1	exon	ENSMUSG00000017686	ProperStrand	40	chr18	35714145	35714290	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	8	-inf
chr16	13668171	13668242	protein_coding	Parn	utr5	ENSMUSG00000022685	ProperStrand	30	chr4	131908236	131908298	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-4.4753
chr1	155287312	155287354	snoRNA	ENSMUSG00000064435_SNORA4	.	ENSMUSG00000064435	ProperStrand	263	chr2	91436236	91436336	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-4.6046
chr8	41590820	41590908	protein_coding	Cnot7	intron	ENSMUSG00000031601	ProperStrand	19	chr3	123210854	123210892	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	13	-22.4878
chr5	74489201	74489328	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr7	149170854	149171340	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	2	-6.1850
chr14	61398407	61398423	protein_coding	C1qtnf9	exon	ENSMUSG00000071347	ProperStrand	187	chr18	35714204	35714253	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-1.5325
chr2	90235315	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	121828827	121828843	protein_coding	Trafd1	exon	ENSMUSG00000042726	ProperStrand	81	1	-3.8951
chr18	80155339	80155429	LINE	Lx5	L1	chr18Lx580154388	NonProperStrand	1	chr2	28877488	28877568	protein_coding	1700101E01Rik	intron	ENSMUSG00000079502	NonProperStrand	4	1	-inf
chr17	35294879	35294941	protein_coding	Prrc2a	exon	ENSMUSG00000024393	ProperStrand	315	chr10	39978386	39978486	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-2.3944
chr1	130242474	130242561	protein_coding	Mcm6	exon	ENSMUSG00000026355	ProperStrand	69	chr6	100184032	100184050	protein_coding	Rybp	intron	ENSMUSG00000072872	NonProperStrand	7	1	-17.5140
chr5	140251368	140251424	protein_coding	Ints1	utr5	ENSMUSG00000029547	ProperStrand	45	chr11	69483136	69483194	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.9519
chr6	88040143	88040243	protein_coding	Rpn1	exon	ENSMUSG00000030062	ProperStrand	58	chrX	34622981	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-3.2325
chr6	134397826	134491890	protein_coding	Lrp6	exon	ENSMUSG00000030201	ProperStrand	42	chr10	23505151	23505243	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-3.2403
chr11	48615883	48619098	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	chr18	35716705	35716883	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	7	-3.8794
chr4	140924201	140924219	protein_coding	Fam131c	utr5	ENSMUSG00000006218	NonProperStrand	6	chr2	26494706	26494826	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-12.5732
chr2	172825858	172825875	protein_coding	Rae1	utr5	ENSMUSG00000027509	NonProperStrand	44	chr9	15119735	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-5.4768
chr10	87785923	87785940	protein_coding	Dram1	utr3	ENSMUSG00000020057	ProperStrand	24	chr7	26094673	26094689	protein_coding	Tmem145	exon	ENSMUSG00000043843	ProperStrand	24	1	-17.0397
chr7	133940150	133940217	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-2.9683
chr8	14831641	14831721	protein_coding-noncoding	Dlgap2	utr5	ENSMUSG00000047495	NonProperStrand	1	chr8	14831387	14831477	protein_coding	Dlgap2	exon	ENSMUSG00000047495	NonProperStrand	23	1	-inf
chr8	87525135	87525238	protein_coding	Hook2	exon	ENSMUSG00000052566	ProperStrand	204	chr15	79913288	79913354	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-1.5245
chr4	131908236	131908342	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	chr11	74718930	74719009	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	9	-1.2617
chr10	126629957	126630047	protein_coding	Dtx3	exon	ENSMUSG00000040415	ProperStrand	5	chr11	97642962	97643042	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-7.3581
chr17	25283313	25283329	protein_coding	Clcn7	exon	ENSMUSG00000036636	NonProperStrand	34	chr14	33005142	33005169	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-5.0835
chr2	109738395	109738424	protein_coding	Lin7c	utr3	ENSMUSG00000027162	ProperStrand	15	chr2	26494708	26494826	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.7664
chr17	24895517	24895534	protein_coding	Hs3st6	utr3	ENSMUSG00000039628	ProperStrand	6	chr16	23110455	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-16.5279
chr4	43001621	43003692	protein_coding	Vcp	exon	ENSMUSG00000028452	ProperStrand	108	chr18	33954824	33954904	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-4.3417
chr3	153575134	153575168	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	chr7	52378398	52378459	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	4	-12.4107
chr11	50109818	50110567	protein_coding	Canx	exon	ENSMUSG00000020368	ProperStrand	296	chr1	24621136	24621181	protein_coding	Gm10925	utr3	ENSMUSG00000090378	ProperStrand	320	2	-10.9184
chr2	90235296	90235345	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	16525141	16527689	protein_coding	Gltscr2	exon	ENSMUSG00000041560	ProperStrand	127	3	-7.7890
chr11	97038586	97038642	protein_coding	Kpnb1	exon	ENSMUSG00000001440	ProperStrand	197	chr3	82816757	82816778	protein_coding	Fgg	exon	ENSMUSG00000033860	NonProperStrand	321	1	-7.5782
chr15	98356819	98356912	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	chr5	130300415	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	7	-0.7044
chr14	35138746	35142483	protein_coding	Glud1	exon	ENSMUSG00000021794	ProperStrand	72	chrX	130496426	130496668	protein_coding	Sytl4	exon	ENSMUSG00000031255	ProperStrand	169	1	-10.8689
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr7	116663634	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	7	-2.6885
chr12	104663677	104663695	protein_coding	Ddx24	intron	ENSMUSG00000041645	NonProperStrand	23	chrX	84483697	84483727	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-10.1849
chr18	39551588	39551607	LTR	MLT1C	MaLR	chr18MLT1C39551314	NonProperStrand	1	chr17	46861595	46861611	protein_coding	Pex6	exon	ENSMUSG00000002763	ProperStrand	292	1	-inf
chr13	68759738	68764669	protein_coding	Adcy2	exon	ENSMUSG00000021536	ProperStrand	237	chr11	60967075	60967123	protein_coding	Usp22	utr3	ENSMUSG00000042506	ProperStrand	75	1	-10.1104
chr7	20526640	20526657	protein_coding	2210010C17Rik	intron	ENSMUSG00000040498	NonProperStrand	18	chr1	20552542	20552558	protein_coding	Pkhd1	exon	ENSMUSG00000043760	NonProperStrand	49	1	-16.2045
chr1	63630995	63641654	protein_coding	Adam23	utr3	ENSMUSG00000025964	ProperStrand	59	chr18	35714143	35714248	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	6	-17.9417
chr15	96524029	96525483	protein_coding	Slc38a2	exon	ENSMUSG00000022462	ProperStrand	133	chr3	123210884	123210974	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	6	-7.6285
chr13	107737212	107737228	protein_coding	Dimt1	utr5	ENSMUSG00000021692	ProperStrand	185	chr9	50816824	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	1	-9.5501
chr19	8798738	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	chr16	38158126	38158227	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	8	-11.1355
chr6	115561817	115561917	protein_coding	Mkrn2	exon	ENSMUSG00000000439	ProperStrand	60	chr4	131865945	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-3.2523
chr10	20553641	20553731	LINE	Lx9	L1	chr10Lx920553666	ProperStrand	1	chr10	20553449	20553529	Simple_repeat	(TG)n	Simple_repeat	chr10(TG)n20553133	ProperStrand	1	1	-inf
chr12	52472722	52473417	protein_coding	G2e3	exon	ENSMUSG00000035293	ProperStrand	53	chr7	52381719	52381760	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-7.8220
chr4	116991019	116991036	protein_coding	Rnf220	intron	ENSMUSG00000028677	ProperStrand	131	chr1	107920290	107920311	protein_coding	Zcchc2	exon	ENSMUSG00000038866	ProperStrand	15	1	-14.5633
chr10	80267091	80267165	protein_coding	Sf3a2	exon	ENSMUSG00000020211	ProperStrand	50	chr4	131908356	131908440	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.6894
chr15	58261743	58262277	protein_coding	D15Ertd621e	exon	ENSMUSG00000037119	ProperStrand	26	chr1	89673608	89673688	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-4.8439
chr10	79707811	79707827	SINE	B2_Mm1t	B2	chr10B2_Mm1t79707814	NonProperStrand	14	chr7	88489781	88489816	protein_coding	Rps17	exon	ENSMUSG00000061787	ProperStrand	105	1	-15.1617
chr17	66468411	66468427	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	chr6	85294207	85294296	protein_coding	Rab11fip5	intron	ENSMUSG00000051343	ProperStrand	16	3	-20.1523
chr13	9833579	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr3	90197173	90197671	protein_coding	Ints3	exon	ENSMUSG00000027933	ProperStrand	87	1	-4.2430
chr6	115757991	115758132	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr14	76247711	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	39	-22.1303
chr18	52491922	52491938	protein_coding	Ftmt	exon	ENSMUSG00000024510	ProperStrand	7	chr2	158185536	158185653	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	2	-17.2579
chr17	27699568	27699621	protein_coding	Hmga1	utr3	ENSMUSG00000046711	ProperStrand	180	chr12	110887829	110887852	snoRNA	ENSMUSG00000084549_SNORD113	.	ENSMUSG00000084549	ProperStrand	196	1	-8.7384
chr2	70927899	70927915	protein_coding	Dcaf17	exon	ENSMUSG00000041966	NonProperStrand	89	chr4	131908719	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-3.7879
chr1	173219333	173219677	protein_coding	Ufc1	exon	ENSMUSG00000062963	ProperStrand	8	chr4	131865389	131865479	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	6	-21.6599
chrX	54848113	54848203	LINE	L1Md_F2	L1	chrXL1Md_F254842593	ProperStrand	1	chrX	54848260	54848340	LINE	L1VL1	L1	chrXL1VL154848251	ProperStrand	1	1	-inf
chr11	78134889	78135696	protein_coding	Spag5	exon	ENSMUSG00000002055	ProperStrand	49	chr16	23111389	23111479	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-4.5341
chr9	63995202	63995302	protein_coding	Zwilch	intron	ENSMUSG00000032400	ProperStrand	29	chr1	162965984	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-4.9889
chr2	90235291	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	151765212	151765228	antisense	Gm10574	.	ENSMUSG00000073778	ProperStrand	357	3	-4.1076
chr16	5256015	5256031	protein_coding	Fam86	utr5	ENSMUSG00000022544	ProperStrand	231	chr4	116875202	116875249	snRNA	ENSMUSG00000070228_U5	.	ENSMUSG00000070228	ProperStrand	131	1	-9.0449
chr5	124911887	124911987	protein_coding	Setd8	utr3	ENSMUSG00000049327	ProperStrand	71	chr5	147646781	147646848	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	1	-7.6224
chrX	71589886	71589904	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr1	39605591	39605656	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-4.2657
chr2	147011592	147011610	protein_coding	Nkx2-2	exon	ENSMUSG00000027434	ProperStrand	47	chr2	174172090	174172121	protein_coding	Gnas	utr3	ENSMUSG00000027523	ProperStrand	41	2	-inf
chr9	87414755	87414845	DNA	Tigger7	MER2_type	chr9Tigger787414534	ProperStrand	1	chr9	87414867	87414947	DNA	Tigger7	MER2_type	chr9Tigger787414864	ProperStrand	1	1	-inf
chr5	143722257	143729189	protein_coding	Fscn1	intron	ENSMUSG00000029581	ProperStrand	200	chr18	35716787	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-2.0455
chr4	141720713	141720730	protein_coding	Kazn	intron	ENSMUSG00000040606	ProperStrand	123	chr17	35087910	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-3.8316
chr19	6531460	6531478	protein_coding	Nrxn2	exon	ENSMUSG00000033768	ProperStrand	19	chr4	131865867	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.7782
chr11	117884730	117884830	protein_coding	Pgs1	utr3	ENSMUSG00000017715	ProperStrand	25	chr9	15119993	15120034	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	2	-14.3381
chr19	29441983	29446946	protein_coding	Cd274	utr5	ENSMUSG00000016496	NonProperStrand	2	chr9	15119647	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-inf
chr9	61775256	61775432	protein_coding	Kif23	exon	ENSMUSG00000032254	ProperStrand	41	chr10	23505193	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.7922
chr4	116875138	116875216	snRNA	ENSMUSG00000070228_U5	.	ENSMUSG00000070228	ProperStrand	131	chr9	120037912	120037932	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	4	-10.9716
chr11	30710998	30711028	protein_coding	Psme4	exon	ENSMUSG00000040850	ProperStrand	40	chr1	59761693	59761716	snoRNA	ENSMUSG00000089093_Snord11	.	ENSMUSG00000089093	ProperStrand	193	2	-18.7378
chr6	149093187	149093238	protein_coding	4833442J19Rik	utr3	ENSMUSG00000039958	ProperStrand	2	chr2	91436238	91436338	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-14.9566
chr9	95768043	95770329	protein_coding	Atr	utr3	ENSMUSG00000032409	ProperStrand	44	chr2	32818815	32818883	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	4	-18.6987
chr6	39349045	39349135	protein_coding	Mkrn1	utr3	ENSMUSG00000029922	ProperStrand	177	chr6	18801724	18803641	protein_coding	Naa38	exon	ENSMUSG00000044155	ProperStrand	5	1	-16.2990
chr19	59064715	59064732	protein_coding	4930506M07Rik	exon	ENSMUSG00000041362	ProperStrand	36	chr1	162965551	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.2292
chr7	19590197	19590214	protein_coding	Irf2bp1	exon	ENSMUSG00000044030	NonProperStrand	81	chr15	79913288	79913353	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-3.0462
chr13	114397350	114397366	protein_coding	Snx18	intron	ENSMUSG00000042364	NonProperStrand	7	chr11	62416575	62416632	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-9.5351
chr5	115983444	115983460	protein_coding	Pxn	intron	ENSMUSG00000029528	ProperStrand	171	chr2	155517880	155517910	protein_coding	Trpc4ap	exon	ENSMUSG00000038324	ProperStrand	38	1	-12.1338
chrX	71478648	71482642	protein_coding	Flna	intron	ENSMUSG00000031328	ProperStrand	134	chr18	33954816	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	14	-20.6742
chr3	116209767	116209816	protein_coding	Rtcd1	exon	ENSMUSG00000000339	ProperStrand	6	chr1	88252838	88252876	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	2	-17.8345
chr12	113067327	113067417	protein_coding	Ppp1r13b	utr3	ENSMUSG00000021285	ProperStrand	8	chr1	187066789	187066869	snoRNA	ENSMUSG00000077571_Snora36b	.	ENSMUSG00000077571	ProperStrand	244	1	-14.6403
chr7	108971290	108971306	protein_coding	Inppl1	utr3	ENSMUSG00000032737	ProperStrand	272	chr5	108336377	108336411	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-2.1409
chr12	12612853	12612933	LTR	ORR1E	MaLR	chr12ORR1E12612731	NonProperStrand	1	chr17	29625317	29625407	lincRNA	Gm16912	intron	ENSMUSG00000087551	NonProperStrand	1	1	-inf
chr10	75388406	75389156	protein_coding	Mmp11	exon	ENSMUSG00000000901	ProperStrand	24	chr11	69481416	69481434	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-4.9335
chr12	60145272	60149148	protein_coding	Trappc6b	exon	ENSMUSG00000020993	ProperStrand	6	chrX	34622906	34622982	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-7.7498
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	1	-1.1669
chr5	23907914	23907930	protein_coding	Abcb8	exon	ENSMUSG00000028973	NonProperStrand	49	chr14	76372292	76372392	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	1	-9.3977
chr2	162760385	162760409	protein_coding	Srsf6	exon	ENSMUSG00000016921	ProperStrand	30	chr12	53230775	53230877	protein_coding	Nubpl	intron	ENSMUSG00000035142	ProperStrand	16	1	-17.4052
chr2	41199972	41199989	protein_coding	Lrp1b	exon	ENSMUSG00000049252	ProperStrand	376	chr2	158185553	158185666	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	2	-5.1660
chrX	34622700	34622716	protein_coding	Rpl39	exon	ENSMUSG00000079641	ProperStrand	37	chr16	23110534	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.3186
chr11	51433329	51433384	protein_coding	Nhp2	exon	ENSMUSG00000001056	ProperStrand	32	chr7	118219574	118219614	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-5.3847
chr16	64851346	64851368	Simple_repeat	(CCG)n	Simple_repeat	chr16(CCG)n64851329	NonProperStrand	15	chr4	131866155	131866282	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-6.3678
chr11	97642973	97643058	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	chr17	71990923	71990999	snoRNA	ENSMUSG00000092713_CT010429.1	.	ENSMUSG00000092713	ProperStrand	182	1	-0.8417
chr5	148687221	148687276	protein_coding	Pomp	utr3	ENSMUSG00000029649	ProperStrand	14	chr16	23110829	23110874	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.2008
chr4	116828142	116828196	protein_coding-noncoding	Rps8	utr3	ENSMUSG00000047675	ProperStrand	14	chr1	93263065	93263082	protein_coding	Fam132b	exon	ENSMUSG00000047443	NonProperStrand	98	1	-15.2988
chr15	95334440	95334463	protein_coding	Nell2	intron	ENSMUSG00000022454	NonProperStrand	9	chr16	23110455	23110504	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-6.0870
chr7	67149978	67149998	protein_coding	Snrpn	utr5	ENSMUSG00000000948	ProperStrand	32	chr4	111928995	111929011	protein_coding	Skint3	intron	ENSMUSG00000070868	NonProperStrand	48	1	-15.0243
chr15	81305967	81305984	protein_coding	Rbx1	utr3	ENSMUSG00000022400	ProperStrand	78	chr10	23505193	23505254	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-0.8973
chr14	31867350	31867368	protein_coding	Pbrm1	exon	ENSMUSG00000042323	ProperStrand	87	chr2	22444976	22444999	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-7.0369
chr7	29603739	29603778	protein_coding	Hnrnpl	exon	ENSMUSG00000015165	ProperStrand	150	chr13	38124272	38124290	protein_coding	Cage1	exon	ENSMUSG00000044566	NonProperStrand	1	1	-inf
chr8	86450001	86450063	protein_coding	Lphn1	intron	ENSMUSG00000013033	ProperStrand	221	chr5	74489562	74489652	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-1.5548
chr5	31363523	31363640	protein_coding	Cad	exon	ENSMUSG00000013629	ProperStrand	260	chr7	88558798	88558826	protein_coding	Cpeb1	intron	ENSMUSG00000025586	ProperStrand	6	1	-15.1321
chr4	115484059	115484075	protein_coding	Atpaf1	utr3	ENSMUSG00000028710	ProperStrand	202	chr2	26493364	26493467	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	3	-4.7326
chrX	101160641	101176463	protein_coding	Rlim	utr5	ENSMUSG00000056537	ProperStrand	38	chr4	131865855	131865945	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	6	-14.7269
chr7	13516158	13516186	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr12	88488443	88496424	protein_coding	Pomt2	exon	ENSMUSG00000034126	NonProperStrand	331	1	-5.2934
chr11	102166146	102166162	protein_coding	Ubtf	utr3	ENSMUSG00000020923	ProperStrand	66	chr7	117189991	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	7	-20.2833
chr18	50024576	50024635	protein_coding	Dmxl1	exon	ENSMUSG00000037416	ProperStrand	27	chr4	131865380	131865457	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-5.5455
chr1	78736637	78736653	LINE	Lx8	L1	chr1Lx878736589	ProperStrand	10	chr9	120039533	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-6.8270
chr19	38869531	38869547	protein_coding	Noc3l	exon	ENSMUSG00000024999	NonProperStrand	149	chr4	86502128	86502147	protein_coding	Rps6	exon	ENSMUSG00000028495	ProperStrand	263	1	-8.5295
chr6	121423179	121423195	protein_coding	Iqsec3	utr5	ENSMUSG00000040797	NonProperStrand	139	chr11	106362553	106362643	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-5.7457
chr11	96921526	96921543	protein_coding	Osbpl7	exon	ENSMUSG00000038534	ProperStrand	15	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-11.7436
chr12	55627280	55627370	LINE	Lx7	L1	chr12Lx755627278	ProperStrand	1	chr4	154528300	154528390	protein_coding	Ski	utr3	ENSMUSG00000029050	ProperStrand	28	1	-inf
chr5	125509096	125509112	protein_coding	Ncor2	exon	ENSMUSG00000029478	NonProperStrand	20	chr15	79084215	79084232	protein_coding	Slc16a8	exon	ENSMUSG00000032988	ProperStrand	3	1	-inf
chr10	89131349	89131369	protein_coding-noncoding	Scyl2	utr3	ENSMUSG00000069539	ProperStrand	1	chr8	124641048	124641065	protein_coding	Gm20388	intron	ENSMUSG00000092329	ProperStrand	295	1	-inf
chr17	46790029	46798887	protein_coding	Cul7	exon	ENSMUSG00000038545	ProperStrand	38	chr16	23110843	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.5894
chr13	46797019	46797065	protein_coding	Nup153	exon	ENSMUSG00000021374	ProperStrand	69	chr4	131908299	131908354	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.2232
chr4	134770637	134770713	protein_coding	Clic4	utr3	ENSMUSG00000037242	ProperStrand	84	chrX	71517865	71517955	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	2	-9.5751
chr5	108333572	108333662	snoRNA	ENSMUSG00000064453_Snord21	.	ENSMUSG00000064453	ProperStrand	201	chr10	23505152	23505252	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	7	-3.5310
chr3	94976089	94976189	protein_coding	Sema6c	intron	ENSMUSG00000038777	ProperStrand	30	chr8	73419655	73419729	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.4253
chr13	24054678	24054694	protein_coding	Scgn	exon	ENSMUSG00000021337	ProperStrand	16	chr11	97372833	97372849	protein_coding	Srcin1	utr3	ENSMUSG00000038453	NonProperStrand	21	1	-18.0482
chr6	94776845	94776882	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	chr3	123210870	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	9	-3.4098
chr8	73114446	73114620	protein_coding	Ell	exon	ENSMUSG00000070002	ProperStrand	32	chr3	108357255	108357351	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-5.7644
chr17	12375349	12375459	protein_coding	Agpat4	intron	ENSMUSG00000023827	ProperStrand	15	chr18	73693171	73693189	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	4	-25.8293
chr10	107800728	107800796	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	chr17	35088970	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	5	-7.0928
chr4	116297520	116297543	protein_coding	Nasp	intron	ENSMUSG00000028693	ProperStrand	64	chr16	23110519	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.3523
chr19	7497715	7497731	protein_coding	2700081O15Rik	utr3	ENSMUSG00000053080	NonProperStrand	3	chr15	34370619	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-9.7644
chr11	102059098	102060165	protein_coding	Hdac5	exon	ENSMUSG00000008855	ProperStrand	45	chr3	123210910	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.5489
chr3	88629886	88629921	pseudogene	5830417I10Rik	.	ENSMUSG00000078684	ProperStrand	68	chr9	120037900	120037990	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-4.4660
chr7	13610295	13610354	protein_coding	Trim28	exon	ENSMUSG00000005566	ProperStrand	296	chr11	69730334	69730424	protein_coding	Eif5a	utr3	ENSMUSG00000078812	ProperStrand	164	2	-12.9165
chr1	18974608	18974624	LTR	LTR84a	ERVL	chr1LTR84a18974334	NonProperStrand	22	chr11	62418045	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-7.5551
chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	chr5	134790415	134790432	protein_coding	Gtf2i	utr5	ENSMUSG00000060261	NonProperStrand	7	2	-21.3028
chr7	127802736	127802763	protein_coding	Uqcrc2	utr3	ENSMUSG00000030884	ProperStrand	26	chr1	162965980	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-5.2030
chr7	29681189	29681924	protein_coding	Actn4	exon	ENSMUSG00000054808	ProperStrand	120	chr4	122968677	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-4.9277
chr11	70795819	70796313	protein_coding	C1qbp	exon	ENSMUSG00000018446	ProperStrand	46	chr10	110918592	110918672	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-3.9429
chr11	106684003	106684019	protein_coding	Smurf2	exon	ENSMUSG00000018363	ProperStrand	79	chr4	131908835	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.8739
chr16	23948534	23948555	LTR	MTD	MaLR	chr16MTD23948389	NonProperStrand	1	chr4	131866154	131866179	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-inf
chr1	88254709	88255781	protein_coding	Ncl	exon	ENSMUSG00000026234	NonProperStrand	5	chr11	62416593	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	NonProperStrand	13	2	-20.2198
chr2	90235292	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chrX	98472113	98472185	protein_coding	Med12	exon	ENSMUSG00000079487	ProperStrand	79	1	-3.9419
chr10	27412579	27412659	LINE	L1_Mus3	L1	chr10L1_Mus327409605	NonProperStrand	1	chr16	42689294	42689385	LINE	L1_Mus4	L1	chr16L1_Mus442689155	NonProperStrand	1	1	-inf
chr7	52714459	52714549	protein_coding	Ftl1	exon	ENSMUSG00000050708	ProperStrand	807	chr17	39985431	39985483	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-1.3138
chr8	87494212	87494238	protein_coding	Prdx2	exon	ENSMUSG00000005161	ProperStrand	20	chr10	23505149	23505212	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.0137
chr10	79322623	79322874	protein_coding	Ptbp1	exon	ENSMUSG00000006498	ProperStrand	129	chr11	55296207	55296287	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-4.6904
chr17	13184994	13185014	protein_coding	Wtap	utr5	ENSMUSG00000060475	ProperStrand	119	chr11	97643000	97643090	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.3917
chr17	14011003	14011037	protein_coding	Mllt4	intron	ENSMUSG00000068036	ProperStrand	156	chr7	116663644	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	4	-4.8095
chr7	61818716	61818737	LINE	Lx	L1	chr7Lx61817116	NonProperStrand	1	chr7	29564203	29564223	protein_coding	Sirt2	intron	ENSMUSG00000015149	NonProperStrand	1	1	-inf
chr6	137688311	137689858	protein_coding	Strap	exon	ENSMUSG00000030224	ProperStrand	27	chr10	79518787	79518973	protein_coding	Gpx4	exon	ENSMUSG00000075706	ProperStrand	55	1	-15.1013
chr10	117227045	117227061	protein_coding	Nup107	exon	ENSMUSG00000052798	NonProperStrand	66	chr11	106362326	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-5.6555
chr18	61743359	61743382	protein_coding-noncoding	Csnk1a1	utr5	ENSMUSG00000024576	ProperStrand	5	chr9	120039599	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	3	-18.6821
chr12	92237299	92505275	protein_coding	4930534B04Rik	exon	ENSMUSG00000061533	ProperStrand	14	chr4	131865855	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-7.3753
chr2	92440278	92440296	protein_coding	Chst1	utr5	ENSMUSG00000027221	ProperStrand	17	chr9	15119647	15119737	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.9895
chr4	128405091	128420617	protein_coding	Phc2	utr5	ENSMUSG00000028796	ProperStrand	14	chr16	18240811	18240854	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	3	-21.4094
chr8	42359500	42359560	protein_coding	Pcm1	exon	ENSMUSG00000031592	ProperStrand	57	chr18	45447944	45447967	protein_coding	Kcnn2	intron	ENSMUSG00000054477	ProperStrand	26	1	-15.1060
chr8	87223594	87223610	protein_coding	Trmt1	exon	ENSMUSG00000001909	NonProperStrand	60	chr16	18249767	18249783	protein_coding	Trmt2a	exon	ENSMUSG00000022721	NonProperStrand	4	1	-19.2310
chr16	13690867	13690967	protein_coding	Bfar	intron	ENSMUSG00000022684	ProperStrand	20	chr9	15119371	15119424	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	16	-20.8192
chr17	26923289	26923307	protein_coding	Bnip1	intron	ENSMUSG00000024191	NonProperStrand	4	chr9	15130745	15130809	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	1	-14.8896
chr8	58565909	58565926	protein_coding	Glra3	intron	ENSMUSG00000038257	ProperStrand	9	chr18	83173405	83173471	protein_coding	Zfp516	utr3	ENSMUSG00000058881	ProperStrand	25	1	-18.8861
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr8	3568023	3568039	protein_coding	C330021F23Rik	utr5	ENSMUSG00000065952	NonProperStrand	85	1	-5.2231
chr10	107690419	107690455	protein_coding	Ppp1r12a	exon	ENSMUSG00000019907	ProperStrand	65	chr9	98300443	98300463	protein_coding	Nmnat3	intron	ENSMUSG00000032456	NonProperStrand	19	1	-15.4692
chr3	90906518	90906598	LINE	L1Md_A	L1	chr3L1Md_A90902858	ProperStrand	18	chr8	73419662	73419752	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	11	-21.7990
chr19	6058566	6059187	protein_coding	Fau	exon	ENSMUSG00000038274	ProperStrand	64	chr19	9018593	9020258	protein_coding	Mta2	exon	ENSMUSG00000071646	ProperStrand	70	1	-12.8739
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr14	21934475	21934491	protein_coding	Adk	intron	ENSMUSG00000039197	ProperStrand	32	1	-9.9823
chr2	120872244	120872260	protein_coding	Tgm5	exon	ENSMUSG00000053675	NonProperStrand	163	chr2	26494806	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.4619
chr6	83689115	83689141	LTR	MTEb-int	MaLR	chr6MTEb-int83689064	ProperStrand	1	chr16	23110899	23110999	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	NonProperStrand	93	1	-inf
chr12	68766482	68766504	LINE	L1_Mus2	L1	chr12L1_Mus268766146	ProperStrand	12	chrX	65964806	65964840	protein_coding	Fmr1	intron	ENSMUSG00000000838	ProperStrand	18	1	-18.4539
chr19	5796591	5796668	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr9	15069885	15069901	protein_coding	Med17	exon	ENSMUSG00000031935	ProperStrand	135	1	-5.9408
chr11	115999916	115999932	protein_coding	Mrpl38	exon	ENSMUSG00000020775	NonProperStrand	65	chr12	85293812	85293842	protein_coding	2410016O06Rik	utr3	ENSMUSG00000046791	ProperStrand	27	1	-14.7644
chr5	140248608	140248696	protein_coding	Ints1	exon	ENSMUSG00000029547	ProperStrand	45	chr8	73115775	73115791	protein_coding	Ell	utr3	ENSMUSG00000070002	NonProperStrand	134	1	-12.2809
chr2	93041214	93041314	protein_coding	Trp53i11	utr3	ENSMUSG00000068735	ProperStrand	46	chr7	148634803	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-4.4908
chr6	70763602	70763621	SINE	B1_Mur2	Alu	chr6B1_Mur270763597	NonProperStrand	1	chr15	99610976	99611041	protein_coding	Lima1	exon	ENSMUSG00000023022	ProperStrand	159	1	-inf
mmu-miR-1949	3	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr11	83107805	83107895	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	1	-3.7943
chr11	103511201	103511217	protein_coding	Rprml	exon	ENSMUSG00000046215	ProperStrand	16	chr4	86232392	86232484	snoRNA	ENSMUSG00000088958_Scarna8	.	ENSMUSG00000088958	ProperStrand	366	1	-12.3769
chr11	120208104	120208273	protein_coding	Actg1	exon	ENSMUSG00000062825	ProperStrand	178	chr10	90581038	90581072	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	2	-4.8547
chr8	126108519	126108543	rRNA	n-R5s127	.	ENSMUSG00000075856	ProperStrand	7	chr9	15118332	15118375	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-7.7405
chr9	44598074	44598095	protein_coding	Ift46	intron	ENSMUSG00000002031	NonProperStrand	28	chr5	135421515	135421549	protein_coding	Cldn4	utr3	ENSMUSG00000047501	ProperStrand	12	1	-18.0050
chr1	173341933	173341949	protein_coding	Usf1	utr5	ENSMUSG00000026641	NonProperStrand	144	chr15	79908929	79908955	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-3.7996
chr15	77793644	77793713	protein_coding	Eif3d	exon	ENSMUSG00000016554	ProperStrand	69	chr16	23111708	23111798	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.6857
chr16	57391673	57391760	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr9	15119966	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	NonProperStrand	2	1	-18.0561
chr7	152049668	152049712	protein_coding	Fgf4	utr3	ENSMUSG00000050917	ProperStrand	66	chr9	120037998	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-4.5230
chr1	44159536	44159555	protein_coding	Kdelc1	intron	ENSMUSG00000026047	ProperStrand	22	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.5019
chr4	153642050	153642067	protein_coding	Megf6	exon	ENSMUSG00000057751	ProperStrand	23	chr4	131865391	131865515	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-5.8638
chr5	74489202	74489231	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr14	87912387	87912403	protein_coding	Tdrd3	utr3	ENSMUSG00000022019	NonProperStrand	46	1	-6.1448
chr12	110149579	110149604	protein_coding	Wdr25	intron	ENSMUSG00000040877	ProperStrand	14	chr7	116664794	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-5.2856
chr2	35419880	35419897	protein_coding	Dab2ip	intron	ENSMUSG00000026883	NonProperStrand	58	chr15	98350216	98350271	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-4.8259
chr10	87892264	87892282	protein_coding	Gnptab	exon	ENSMUSG00000035311	ProperStrand	65	chr2	32818886	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-5.3146
chr11	97898205	97905089	protein_coding	Stac2	utr3	ENSMUSG00000017400	ProperStrand	10	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-5.0079
chr1	193445388	193445479	protein_coding	Ints7	utr3	ENSMUSG00000037461	ProperStrand	108	chr16	23110466	23110523	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.5234
chr11	88797226	88816617	protein_coding	Scpep1	exon	ENSMUSG00000000278	ProperStrand	54	chr16	23111689	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-5.6941
chr7	31887572	31887652	protein_coding	Hpn	exon	ENSMUSG00000001249	ProperStrand	126	chr8	90690914	90691004	protein_coding	Heatr3	exon	ENSMUSG00000031657	ProperStrand	24	1	-13.6773
chr10	5953916	5954004	SINE	B3	B2	chr10B35953928	NonProperStrand	1	chr6	71832595	71832685	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-inf
chr6	122266518	122266561	protein_coding	M6pr	utr3	ENSMUSG00000007458	ProperStrand	56	chr17	26102201	26102301	protein_coding	Solh	exon	ENSMUSG00000037326	ProperStrand	53	1	-13.7032
chr17	34089399	34089440	protein_coding	Rps18	exon	ENSMUSG00000008668	ProperStrand	111	chr11	6428035	6428073	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.1289
chr11	120148960	120148976	protein_coding	Bahcc1	exon	ENSMUSG00000039741	NonProperStrand	268	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-5.9582
chr17	30873093	30874222	protein_coding	Dnahc8	exon	ENSMUSG00000033826	ProperStrand	246	chr17	24856652	24856742	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-3.7117
chr9	83678799	83681879	protein_coding	Elovl4	exon	ENSMUSG00000032262	ProperStrand	159	chr7	144313225	144313295	protein_coding	Mgmt	exon	ENSMUSG00000054612	ProperStrand	14	1	-14.3245
chr13	45011804	45011858	protein_coding	Jarid2	exon	ENSMUSG00000038518	ProperStrand	372	chr1	53924798	53924815	protein_coding	Hecw2	intron	ENSMUSG00000042807	ProperStrand	39	1	-10.5263
chr8	122901350	124218890	protein_coding	Gm20388	intron	ENSMUSG00000092329	ProperStrand	295	chr1	162965531	162965592	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-2.7269
chr10	76530382	76532184	protein_coding	Col18a1	exon	ENSMUSG00000001435	ProperStrand	287	chr18	35102297	35102340	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-3.5802
chr7	38468013	38468033	protein_coding	Zfp536	intron	ENSMUSG00000043456	ProperStrand	57	chr11	62416952	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-6.1443
chr9	48809624	48811102	protein_coding	Usp28	exon	ENSMUSG00000032267	ProperStrand	63	chr7	29136526	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-4.0699
chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	chr1	162967512	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-1.0103
chr15	65684591	65684641	protein_coding	Efr3a	exon	ENSMUSG00000015002	ProperStrand	8	chr2	130103782	130103798	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-12.6045
chr6	142456396	142456434	protein_coding	Ldhb	utr5	ENSMUSG00000030246	ProperStrand	224	chr5	74489640	74489680	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-1.5350
chr18	10652358	10658798	protein_coding	Abhd3	exon	ENSMUSG00000002475	ProperStrand	6	chr4	131888868	131888896	protein_coding	Rcc1	exon	ENSMUSG00000028896	ProperStrand	55	1	-17.9747
chr19	31990503	31990520	protein_coding	A1cf	intron	ENSMUSG00000052595	NonProperStrand	8	chr18	35716763	35716788	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-5.9895
chr19	18999166	18999183	LINE	Lx7	L1	chr19Lx718998792	ProperStrand	2	chr5	45884701	45886408	protein_coding	Lap3	exon	ENSMUSG00000039682	ProperStrand	87	1	-19.5639
chr10	76498629	76498731	protein_coding	Slc19a1	intron	ENSMUSG00000001436	ProperStrand	11	chr16	23110973	23111010	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-4.7202
chr13	8766291	8766308	protein_coding	Adarb2	utr3	ENSMUSG00000052551	ProperStrand	292	chr17	24856652	24856752	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-3.3974
chr11	84090083	84091309	protein_coding	Acaca	exon	ENSMUSG00000020532	ProperStrand	100	chr7	29136578	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-2.8959
chr15	76736614	76736647	protein_coding	Rpl8	exon	ENSMUSG00000003970	ProperStrand	191	chr9	15119713	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-0.8932
chr5	147890422	147890532	protein_coding	Polr1d	utr3	ENSMUSG00000029642	ProperStrand	23	chr16	23110959	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.4133
chr15	82210572	82210588	protein_coding	Cyp2d22	utr5	ENSMUSG00000061740	NonProperStrand	18	chr18	35716763	35716817	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.3552
chr7	5018812	5019167	protein_coding	U2af2	exon	ENSMUSG00000030435	ProperStrand	103	chr14	33005146	33005236	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	7	-19.1151
chr5	115534927	115538318	protein_coding	Sppl3	exon	ENSMUSG00000029550	ProperStrand	33	chr17	13112550	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-5.7443
chr2	127043698	127044125	protein_coding	Snrnp200	exon	ENSMUSG00000003660	ProperStrand	203	chr17	12585979	12585995	protein_coding	Plg	exon	ENSMUSG00000059481	ProperStrand	86	2	-16.0014
chr17	29230601	29230620	protein_coding	Cdkn1a	intron	ENSMUSG00000023067	NonProperStrand	11	chr4	114261858	114261874	protein_coding	Gm12824	intron	ENSMUSG00000070867	ProperStrand	4	1	-20.1343
chrX	11633918	11637318	protein_coding	Bcor	exon	ENSMUSG00000040363	ProperStrand	20	chr5	121655017	121655097	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-9.6247
chr18	38924215	38924233	protein_coding	Arhgap26	intron	ENSMUSG00000036452	NonProperStrand	29	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0921
chr2	113131726	113131745	protein_coding	Tmco5b	intron	ENSMUSG00000041255	ProperStrand	1	chr10	23505152	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-inf
chr13	98265219	98265275	lincRNA	Gm11019	exon	ENSMUSG00000078952	ProperStrand	113	chr11	3426352	3426368	protein_coding	Smtn	exon	ENSMUSG00000020439	ProperStrand	222	1	-9.4196
chr7	19548850	19548867	lincRNA	Gm17370	exon	ENSMUSG00000092034	ProperStrand	8	chr16	23110940	23110957	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.2180
chr19	31867067	31867095	Low_complexity	GA-rich	Low_complexity	chr19GA-rich31867072	NonProperStrand	4	chr19	8800400	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	4	-inf
chr5	121160501	121160518	protein_coding	Dtx1	utr5	ENSMUSG00000029603	NonProperStrand	33	chr7	87369617	87369656	protein_coding	Sema4b	exon	ENSMUSG00000030539	ProperStrand	54	1	-14.7364
chr1	173996736	173996836	protein_coding	Ncstn	utr3	ENSMUSG00000003458	ProperStrand	20	chr11	106362340	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-8.0393
chr5	130717465	130717555	protein_coding	0610007L01Rik	utr3	ENSMUSG00000053094	ProperStrand	39	chr5	130295421	130295501	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-6.0944
chr13	54753205	54753285	protein_coding-noncoding	Faf2	utr5	ENSMUSG00000025873	ProperStrand	1	chr13	54753411	54753501	protein_coding	Faf2	exon	ENSMUSG00000025873	ProperStrand	90	1	-inf
chr19	5898100	5898149	protein_coding	Dpf2	utr3	ENSMUSG00000024826	ProperStrand	38	chr11	69483136	69483226	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-8.2498
chr11	103724582	103724633	protein_coding	Nsf	exon	ENSMUSG00000034187	ProperStrand	20	chr4	131908809	131908892	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.0012
chr8	112073791	112075474	protein_coding	Dhx38	exon	ENSMUSG00000037993	ProperStrand	27	chr1	162965560	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.7840
chr7	52713375	52715075	protein_coding	Ftl1	utr5	ENSMUSG00000050708	ProperStrand	807	chr7	116663635	116663767	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	6	-0.8005
chr11	62416575	62416600	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr1	162967137	162967177	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	1	-4.4222
chr11	6519816	6519916	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	chr1	172975138	172975189	tRNA	tRNA699-GlyGCC	.	1169571	ProperStrand	660	1	-3.3096
chr19	36662110	36662159	protein_coding-noncoding	Hectd2	utr5	ENSMUSG00000041180	ProperStrand	2	chr16	23110964	23111003	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr5	40528123	40528140	LINE	L1MC1	L1	chr5L1MC140528064	ProperStrand	1	chr17	35291991	35292317	protein_coding	Prrc2a	exon	ENSMUSG00000024393	ProperStrand	315	1	-inf
chr2	32615081	32615161	protein_coding	Tor2a	exon	ENSMUSG00000009563	ProperStrand	8	chr16	23110833	23110923	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-5.7082
chr9	44614223	44614273	protein_coding	Mll1	utr3	ENSMUSG00000002028	ProperStrand	151	chr2	104492503	104492519	protein_coding	Cstf3	intron	ENSMUSG00000027176	NonProperStrand	3	1	-18.0132
chr13	49799970	49800070	protein_coding	Iars	intron	ENSMUSG00000037851	ProperStrand	95	chr1	63225693	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	4	-17.4362
chr4	154931324	154931625	protein_coding	Gnb1	utr3	ENSMUSG00000029064	ProperStrand	69	chr15	98356821	98356859	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	1	-7.4751
chr8	72624839	72624929	protein_coding	Ncan	intron	ENSMUSG00000002341	NonProperStrand	6	chr16	32300175	32300265	protein_coding	Rnf168	utr3	ENSMUSG00000014074	ProperStrand	7	1	-19.6825
chr5	74489234	74489314	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr8	91552357	91552447	protein_coding	Sall1	exon	ENSMUSG00000031665	ProperStrand	96	1	-4.7105
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr15	79908951	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	2	-1.8270
chr13	99079942	99080030	protein_coding	Btf3	utr3	ENSMUSG00000021660	ProperStrand	64	chr1	162966021	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-3.4843
chr16	24984504	24984521	protein_coding	Lpp	utr3	ENSMUSG00000033306	NonProperStrand	189	chr1	162965530	162965593	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.3848
chr19	59335933	59337435	protein_coding	Slc18a2	exon	ENSMUSG00000025094	ProperStrand	11	chr5	130300470	130300560	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-13.6248
chr6	5750887	5855118	protein_coding	Dync1i1	exon	ENSMUSG00000029757	ProperStrand	10	chr16	23111457	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.3721
chr11	94200631	94200655	protein_coding	Ankrd40	utr3	ENSMUSG00000020864	ProperStrand	11	chr11	97642952	97643013	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-5.6855
chr4	151707187	151707230	protein_coding	Rpl22	utr3	ENSMUSG00000028936	ProperStrand	112	chr19	8963086	8963162	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-2.5018
chr4	108578113	108578193	protein_coding	Rab3b	intron	ENSMUSG00000003411	ProperStrand	5	chr4	109196628	109196718	protein_coding	4930522H14Rik	intron	ENSMUSG00000060491	ProperStrand	12	1	-19.5840
chr8	125093938	125094120	protein_coding	Cdt1	exon	ENSMUSG00000006585	ProperStrand	47	chr7	116663650	116663730	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.9388
chr7	52777709	52777725	protein_coding	Tulp2	exon	ENSMUSG00000023467	ProperStrand	24	chr13	55423235	55423281	protein_coding	Rab24	utr5	ENSMUSG00000034789	ProperStrand	5	1	-19.0819
chr16	96381814	96381838	protein_coding	Lca5l	intron	ENSMUSG00000045275	NonProperStrand	210	chr10	115891610	115891628	protein_coding	Kcnmb4	intron	ENSMUSG00000054934	NonProperStrand	11	1	-14.2663
chr1	162968213	162968289	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	chr12	44844107	44844152	snoRNA	ENSMUSG00000065004_SNORA33	.	ENSMUSG00000065004	ProperStrand	111	2	-9.1526
chr1	102076758	102076791	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	chr11	77996559	77996624	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	2	-4.3503
chr17	6138911	6138928	protein_coding	Tulp4	exon	ENSMUSG00000034377	ProperStrand	164	chr2	26494775	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.4531
chr11	119207004	119207020	protein_coding	Sgsh	utr3	ENSMUSG00000005043	ProperStrand	67	chr4	131908815	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.0774
chr11	87895146	87895165	protein_coding	Vezf1	exon	ENSMUSG00000018377	NonProperStrand	17	chr18	33954817	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-5.9445
chr7	82600670	82600686	protein_coding	Akap13	intron	ENSMUSG00000066406	ProperStrand	80	chr15	79908930	79908989	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-4.9140
chr9	120866272	120866334	protein_coding	Ctnnb1	exon	ENSMUSG00000006932	ProperStrand	214	chr10	90581049	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-2.4763
chr15	84123233	84123323	protein_coding	Parvb	exon	ENSMUSG00000022438	ProperStrand	127	chr7	116663653	116663733	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.3331
chr8	112833096	112836065	protein_coding	Hydin	exon	ENSMUSG00000059854	NonProperStrand	42	chr12	60141383	60141473	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-7.5404
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr10	42254882	42254949	protein_coding	Snx3	utr3	ENSMUSG00000019804	ProperStrand	19	1	-8.6788
chr1	119700392	119700482	LTR	RMER13B	ERVK	chr1RMER13B119700239	ProperStrand	1	chr1	119700595	119700675	LTR	RMER13B	ERVK	chr1RMER13B119700511	ProperStrand	1	1	-inf
chr9	108215185	108215228	protein_coding	Rhoa	intron	ENSMUSG00000007815	ProperStrand	45	chr11	6428089	6428155	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-6.3078
chr11	116535914	116535982	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	3	-5.2233
chr7	108259328	108287703	protein_coding	Fchsd2	exon	ENSMUSG00000030691	ProperStrand	8	chr13	24776253	24776272	protein_coding	Fam65b	intron	ENSMUSG00000036006	NonProperStrand	8	1	-18.6452
chr7	38986711	38986730	SINE	B3	B2	chr7B338986685	ProperStrand	1	chr1	89673658	89673758	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-inf
chr9	103401280	103401296	protein_coding	Tmem108	exon	ENSMUSG00000042757	NonProperStrand	323	chrX	84483702	84483720	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-4.9360
chr11	77316863	77316880	protein_coding	Git1	exon	ENSMUSG00000011877	ProperStrand	95	chr7	148446999	148447175	protein_coding	Phrf1	exon	ENSMUSG00000038611	ProperStrand	86	1	-11.6662
chr17	35972474	35972564	protein_coding	Tubb5	exon	ENSMUSG00000001525	ProperStrand	624	chr7	118199569	118199641	protein_coding	Ctr9	utr3	ENSMUSG00000005609	ProperStrand	21	1	-10.7511
chr4	151432594	151432652	protein_coding	Nol9	utr3	ENSMUSG00000028948	ProperStrand	93	chrX	19683228	19683244	protein_coding	Slc9a7	exon	ENSMUSG00000037341	NonProperStrand	136	1	-10.7898
chr6	67231765	67231806	protein_coding	Serbp1	exon	ENSMUSG00000036371	ProperStrand	261	chr19	8799830	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-2.2652
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr8	98244320	98244545	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	1	-3.8180
chr2	103619680	103623163	protein_coding	Caprin1	exon	ENSMUSG00000027184	ProperStrand	145	chr11	69483136	69483183	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.1050
chr4	150463031	150463090	protein_coding	Camta1	exon	ENSMUSG00000014592	ProperStrand	170	chr11	69483195	69483232	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-0.9066
chr4	108278918	108278934	protein_coding	Orc1	exon	ENSMUSG00000028587	ProperStrand	161	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-7.3995
chr19	46782663	46783498	protein_coding	As3mt	exon	ENSMUSG00000003559	ProperStrand	10	chr18	35714145	35714245	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-6.9619
chr17	29230601	29230620	protein_coding	Cdkn1a	intron	ENSMUSG00000023067	NonProperStrand	11	chr11	5180669	5180685	protein_coding	Znrf3	utr3	ENSMUSG00000041961	NonProperStrand	210	1	-14.2683
chr3	36898971	36901519	protein_coding	4932438A13Rik	exon	ENSMUSG00000037270	ProperStrand	96	chr15	98350146	98350279	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	15	-24.9580
chr11	72922396	72922413	protein_coding	Itgae	intron	ENSMUSG00000005947	ProperStrand	16	chr14	52701370	52701403	protein_coding	Hnrnpc	intron	ENSMUSG00000060373	ProperStrand	75	1	-15.5598
chr5	28398236	28400087	protein_coding	Insig1	exon	ENSMUSG00000045294	ProperStrand	35	chr9	64024954	64024998	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	1	-10.2279
chr4	13017356	13017446	lincRNA	Gm11820	intron	ENSMUSG00000086227	ProperStrand	1	chr2	5128899	5128979	protein_coding	Ccdc3	intron	ENSMUSG00000026676	ProperStrand	6	1	-inf
chr5	147646576	147646666	protein_coding	Rpl21	exon	ENSMUSG00000041453	ProperStrand	112	chr8	129468781	129468861	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-3.2514
chr19	53080651	53080741	protein_coding	Xpnpep1	exon	ENSMUSG00000025027	ProperStrand	49	chr10	110918552	110918632	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-3.8243
chr2	58819897	58819916	protein_coding	Ccdc148	intron	ENSMUSG00000036641	NonProperStrand	7	chr3	108357360	108357460	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	NonProperStrand	17	1	-20.3967
chr13	101555737	101555806	protein_coding	Ccnb1	exon	ENSMUSG00000041431	ProperStrand	39	chr16	23111753	23111834	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-6.9061
chr14	27353820	27353870	protein_coding	Slmap	utr5	ENSMUSG00000021870	ProperStrand	9	chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	1	-12.4764
chr6	122832844	122832908	protein_coding	Necap1	exon	ENSMUSG00000030327	ProperStrand	12	chr14	77424372	77424388	protein_coding	9030625A04Rik	utr3	ENSMUSG00000044350	NonProperStrand	152	1	-14.7323
chr2	165904622	165904638	protein_coding	Sulf2	exon	ENSMUSG00000006800	ProperStrand	171	chr11	97639676	97642660	protein_coding	Rpl23	exon	ENSMUSG00000071415	ProperStrand	920	1	-5.7858
chr11	62416575	62416605	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr5	121655017	121655107	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-1.0750
chr14	41720122	41720212	protein_coding	Tspan14	utr3	ENSMUSG00000037824	ProperStrand	31	chr7	52382234	52382269	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	8	-19.3667
chr11	98552236	98552262	protein_coding	Psmd3	exon	ENSMUSG00000017221	ProperStrand	51	chr4	131908254	131908344	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-4.7811
chr11	120440239	120440343	protein_coding	Arhgdia	utr3	ENSMUSG00000025132	ProperStrand	39	chr17	24665453	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-5.7824
chr6	30694359	30694867	protein_coding	Mest	exon	ENSMUSG00000051855	ProperStrand	11	chr4	131908688	131908785	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-7.0530
chrX	152009278	152009294	protein_coding	Ptchd1	exon	ENSMUSG00000041552	NonProperStrand	294	chr11	62416600	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-4.0123
chr19	6372100	6372190	protein_coding	Sf1	exon	ENSMUSG00000024949	ProperStrand	251	chr6	71832603	71832683	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	2	-5.0495
chr15	22578450	22578467	protein_coding	Cdh18	intron	ENSMUSG00000040420	NonProperStrand	26	chr7	29136525	29136575	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.8707
chr19	43579329	43579352	protein_coding	Got1	exon	ENSMUSG00000025190	ProperStrand	32	chr10	23505152	23505248	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-3.9487
chr14	22491128	22491148	protein_coding	Myst4	utr3	ENSMUSG00000021767	ProperStrand	151	chr4	116828379	116828442	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	2	-10.5726
chr5	151755614	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr2	144087323	144087447	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	2	-2.7815
chr17	69624550	69624591	protein_coding	Epb4.1l3	intron	ENSMUSG00000024044	NonProperStrand	6	chr1	162965984	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-13.3910
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr2	144087324	144087440	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-2.4320
chr15	77950311	77950330	protein_coding	Cacng2	utr5	ENSMUSG00000019146	ProperStrand	11	chr16	23110969	23110997	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.6241
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr4	116827121	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	2	-4.5245
chr11	120209159	120209342	protein_coding	Actg1	exon	ENSMUSG00000062825	ProperStrand	178	chr8	32260340	32260425	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	3	-6.8540
chr18	84889628	84889646	lincRNA	D030046N08Rik	exon	ENSMUSG00000089760	ProperStrand	10	chr5	92873167	92873232	protein_coding	Scarb2	utr3	ENSMUSG00000029426	ProperStrand	30	1	-18.5490
chrX	71589885	71589904	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr19	8800377	8800467	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-0.9956
chr8	126532102	126532118	protein_coding	Taf5l	exon	ENSMUSG00000038697	ProperStrand	23	chr16	23110841	23110867	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.4133
chr12	55797770	55797850	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	chr2	144087331	144087421	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-1.4576
chr4	122970392	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	chr7	29136525	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	13	-2.0833
chr18	67663139	67663168	protein_coding	Spire1	exon	ENSMUSG00000024533	ProperStrand	14	chr4	96412508	96412526	protein_coding	Gm12695	intron	ENSMUSG00000078639	ProperStrand	110	1	-15.0739
chr1	102076758	102076791	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	chr1	88247743	88247865	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	7	-13.1337
chr2	9970056	9970075	protein_coding	Taf3	utr5	ENSMUSG00000025782	ProperStrand	62	chr15	76499192	76499210	protein_coding	Foxh1	exon	ENSMUSG00000033837	NonProperStrand	1	1	-inf
chr5	88932072	88932088	protein_coding	Enam	exon	ENSMUSG00000029286	ProperStrand	11	chr8	73223158	73223244	protein_coding	Jund	exon	ENSMUSG00000071076	ProperStrand	50	1	-17.1246
chr6	124761568	124761935	protein_coding	Tpi1	exon	ENSMUSG00000023456	ProperStrand	94	chr9	120039585	120039665	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.5240
chr9	61220643	61220733	protein_coding	Tle3	utr5	ENSMUSG00000032280	ProperStrand	88	chr4	131865913	131865983	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.2107
chr18	60937530	60938088	protein_coding	Rps14	exon	ENSMUSG00000024608	ProperStrand	154	chr1	145626057	145626147	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-6.9515
chr6	45494576	45494594	protein_coding	Cntnap2	intron	ENSMUSG00000039419	NonProperStrand	283	chr11	6428077	6428157	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-0.8076
chr11	76859446	76859536	protein_coding	Ccdc55	exon	ENSMUSG00000037958	ProperStrand	4	chr10	23505157	23505237	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-6.2798
chr2	103588152	103588174	protein_coding	Nat10	exon	ENSMUSG00000027185	ProperStrand	124	chr7	148634747	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-4.6645
chr2	166661929	166668246	protein_coding	Arfgef2	exon	ENSMUSG00000074582	ProperStrand	32	chr16	23110456	23110536	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.5869
chr11	60974127	60974879	protein_coding	Usp22	exon	ENSMUSG00000042506	ProperStrand	75	chr2	130101274	130101310	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	2	-9.9818
chr9	15124258	15124284	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	NonProperStrand	100	chr2	153050783	153050799	protein_coding	Tspyl3	exon	ENSMUSG00000074671	ProperStrand	228	1	-9.6111
chr4	153665296	153665386	protein_coding	Arhgef16	exon	ENSMUSG00000029032	ProperStrand	12	chr4	131865856	131865936	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.6729
chr2	119599936	119600759	protein_coding	Rpap1	exon	ENSMUSG00000034032	ProperStrand	96	chr7	29136525	29136559	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.6132
chr2	174155898	174159775	protein_coding	Gnas	utr3	ENSMUSG00000027523	ProperStrand	41	chr5	111121064	111121133	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-7.1916
chr16	75761550	75765200	protein_coding	Hspa13	exon	ENSMUSG00000032932	NonProperStrand	57	chr11	101466257	101466350	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	1	-8.9747
chr2	90235313	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	14831119	14831136	protein_coding	Thbs2	utr5	ENSMUSG00000023885	ProperStrand	5	1	-9.5409
chr9	20692662	20692678	protein_coding	Ppan	utr5	ENSMUSG00000004100	NonProperStrand	2	chr7	117189932	117189990	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-10.6222
chr11	59476404	59509671	protein_coding	Mprip	utr5	ENSMUSG00000005417	ProperStrand	58	chr3	40872400	40872467	protein_coding	Pgrmc2	utr3	ENSMUSG00000049940	ProperStrand	22	13	-inf
chr19	8799019	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	chr13	22006779	22006805	tRNA	tRNA85-LeuCAA	.	96971	ProperStrand	54	7	-inf
chr2	168845004	168845104	LTR	RMER17C	ERVK	chr2RMER17C168844970	ProperStrand	3	chr2	128500476	128501421	protein_coding	Anapc1	exon	ENSMUSG00000014355	ProperStrand	38	1	-20.2606
chr5	74489262	74489324	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr7	4880035	4880051	protein_coding	A430110N23Rik	exon	ENSMUSG00000035279	ProperStrand	4	1	-11.2543
chr1	63226090	63226174	protein_coding	Eef1b2	exon	ENSMUSG00000025967	ProperStrand	106	chr7	52378438	52378482	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	1	-7.3691
chr6	90986402	90986451	protein_coding	Nup210	exon	ENSMUSG00000030091	ProperStrand	140	chr4	131866203	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-2.1731
chr2	131363354	131363444	SINE	B1_Mus1	Alu	chr2B1_Mus1131363341	ProperStrand	1	chr2	131363112	131363192	SINE	ID4	ID	chr2ID4131363111	NonProperStrand	1	1	-inf
chr19	26785161	26790606	protein_coding	Smarca2	exon	ENSMUSG00000024921	ProperStrand	38	chr10	79798122	79798139	protein_coding	Reep6	utr3	ENSMUSG00000035504	ProperStrand	3	1	-inf
chr10	127797125	127798039	protein_coding	Cs	exon	ENSMUSG00000005683	ProperStrand	63	chr11	6428049	6428091	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	19	-inf
chr10	117227045	117227061	protein_coding	Nup107	exon	ENSMUSG00000052798	NonProperStrand	66	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	2	-12.0919
chrX	70237450	70237471	miRNA	Mir2137	.	ENSMUSG00000089357	ProperStrand	50	chr5	130300507	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.8268
chr14	20631244	20631336	protein_coding	2700060E02Rik	utr3	ENSMUSG00000021807	ProperStrand	43	chr8	37635913	37637019	protein_coding	Dlc1	exon	ENSMUSG00000031523	ProperStrand	89	1	-13.1983
chr4	116826707	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	NonProperStrand	2	chr19	8798753	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	NonProperStrand	2	1	-inf
chr15	32851059	32946871	protein_coding	Sdc2	exon	ENSMUSG00000022261	NonProperStrand	3	chr12	106269353	106269443	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-10.4002
chr6	72388906	72388922	protein_coding	Mat2a	intron	ENSMUSG00000053907	ProperStrand	51	chr17	24857748	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-4.5304
chr14	47808007	47808061	protein_coding	Gch1	intron	ENSMUSG00000037580	ProperStrand	5	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-7.3377
chr5	51849353	51849370	protein_coding	Ppargc1a	utr3	ENSMUSG00000029167	ProperStrand	1	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-inf
chr15	64638368	64638390	protein_coding	Adcy8	intron	ENSMUSG00000022376	ProperStrand	19	chr9	120038571	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.2199
chr1	92689614	92689630	protein_coding	Col6a3	exon	ENSMUSG00000048126	ProperStrand	79	chr10	23505221	23505238	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-0.8821
chr10	20080843	20080860	protein_coding	Fam54a	utr3	ENSMUSG00000019992	ProperStrand	232	chr15	5068407	5068484	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-3.4820
chr13	21872164	21872192	protein_coding	Hist1h1b	exon	ENSMUSG00000058773	ProperStrand	65	chr18	35714145	35714235	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	5	-14.2375
chr2	89368462	89368480	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	chr5	74489543	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	4	-5.5755
chr1	164756428	164756455	LINE	L1Md_T	L1	chr1L1Md_T164755447	ProperStrand	1	chr2	179322379	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	1	-inf
chr2	90235312	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	27730588	27730605	protein_coding	Dpp6	intron	ENSMUSG00000061576	ProperStrand	35	1	-5.5085
chr6	96322858	96322874	protein_coding	Fam19a1	intron	ENSMUSG00000059187	NonProperStrand	60	chr14	52829460	52829569	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-8.2022
chr8	113423133	113423346	protein_coding	Fuk	exon	ENSMUSG00000033703	ProperStrand	18	chr11	69481387	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.5024
chr13	54781860	54781960	protein_coding	Rnf44	utr3	ENSMUSG00000034928	NonProperStrand	5	chr4	116828379	116828409	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	NonProperStrand	1	1	-inf
chr2	91436228	91436336	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	chr4	41158541	41158579	snoRNA	ENSMUSG00000089308_SNORD121A	.	ENSMUSG00000089308	ProperStrand	209	11	-19.9881
chr11	96112970	96112987	protein_coding	Gm53	exon	ENSMUSG00000078706	NonProperStrand	16	chr5	121655098	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-6.3246
chr13	98266867	98266946	lincRNA	Gm11019	exon	ENSMUSG00000078952	ProperStrand	113	chr3	123210854	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	7	-10.6233
chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	chr4	131908236	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-3.0313
chr2	112174635	112176000	protein_coding	Slc12a6	exon	ENSMUSG00000027130	ProperStrand	35	chr1	89673626	89673706	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-4.2696
chr2	24825186	24827046	protein_coding	Wdr85	exon	ENSMUSG00000026975	ProperStrand	323	chr2	139504270	139504288	protein_coding	Ism1	utr5	ENSMUSG00000074766	ProperStrand	8	1	-14.0822
chr7	125252695	125253524	protein_coding	Rps15a	exon	ENSMUSG00000008683	ProperStrand	28	chr1	34247773	34247812	protein_coding	Dst	utr5	ENSMUSG00000026131	ProperStrand	461	5	-19.3189
chr14	45949538	45949554	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	chr5	54389950	54389967	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	1	-7.4021
chr9	54448897	54448961	protein_coding	Idh3a	exon	ENSMUSG00000032279	ProperStrand	8	chr9	120037905	120038005	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-8.7708
chr7	51505867	51505891	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	chr11	6519853	6519943	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-3.3997
chr2	181283536	181283992	protein_coding	Dnajc5	intron	ENSMUSG00000000826	ProperStrand	14	chr15	82980136	82980190	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-10.0866
chr4	151730301	151730737	protein_coding	Chd5	exon	ENSMUSG00000005045	NonProperStrand	147	chr1	88247816	88247863	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-3.4048
chr5	19606526	19606606	protein_coding	Magi2	intron	ENSMUSG00000040003	ProperStrand	49	chr14	21473351	21473441	protein_coding	Myoz1	intron	ENSMUSG00000068697	NonProperStrand	1	1	-inf
chr3	96073760	96074112	protein_coding	Hist2h2bb	exon	ENSMUSG00000050936	ProperStrand	57	chr16	23110827	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-1.5795
chr17	13201178	13203411	protein_coding	Sod2	exon	ENSMUSG00000006818	ProperStrand	17	chr11	97642952	97642973	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.8122
chr7	117166782	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	chr11	77995222	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	5	-1.0521
chr10	21167733	21167749	SINE	B3A	B2	chr10B3A21167723	ProperStrand	1	chr3	130936539	130936555	protein_coding	Hadh	utr3	ENSMUSG00000027984	ProperStrand	35	1	-inf
chr8	86187819	86187835	protein_coding	Gipc1	exon	ENSMUSG00000019433	ProperStrand	60	chr11	62416599	62416628	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-5.1663
chr7	52161211	52161453	protein_coding	Ap2a1	exon	ENSMUSG00000060279	ProperStrand	193	chr14	52829458	52829568	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	3	-13.5548
chr16	57391759	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr1	162967120	162967162	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	1	-3.3217
chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-4.7667
chrX	104493472	104493491	LTR	RLTR13B2	ERVK	chrXRLTR13B2104492964	NonProperStrand	1	chr11	62418065	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-inf
chr7	109149271	109149287	protein_coding	Numa1	exon	ENSMUSG00000066306	NonProperStrand	171	chr11	62416599	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-5.4775
chr15	89145569	89145628	protein_coding	Sbf1	utr5	ENSMUSG00000036529	ProperStrand	85	chr6	71832550	71832577	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-4.9339
chr16	30314202	30314237	protein_coding	Atp13a3	utr3	ENSMUSG00000022533	ProperStrand	45	chr5	116053148	116053164	protein_coding	Gcn1l1	intron	ENSMUSG00000041638	ProperStrand	408	1	-10.0530
chr11	97963102	97963179	protein_coding	Fbxl20	intron	ENSMUSG00000020883	ProperStrand	23	chr1	162965579	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.0979
chr4	43271762	43272354	protein_coding	Unc13b	exon	ENSMUSG00000028456	ProperStrand	29	chr5	121655056	121655146	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.1397
chr8	109573006	109574046	protein_coding	Cog8	exon	ENSMUSG00000031916	ProperStrand	7	chr10	127521229	127521270	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	1	-13.2178
chr5	73698961	73699051	protein_coding	Ociad1	utr3	ENSMUSG00000029152	ProperStrand	51	chr4	131908688	131908768	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.4523
chr1	102076757	102076792	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	chr1	63225287	63225322	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	1	-5.0168
chr2	103573904	103573978	protein_coding	Nat10	exon	ENSMUSG00000027185	ProperStrand	124	chrX	103174760	103174818	protein_coding	Magt1	exon	ENSMUSG00000031232	ProperStrand	12	2	-inf
chr11	58682398	58682415	protein_coding	2810021J22Rik	utr5	ENSMUSG00000020491	ProperStrand	162	chr2	145076805	145209255	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-5.7604
chr8	12757419	12757437	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr16	20179623	20179639	protein_coding	Yeats2	exon	ENSMUSG00000041215	NonProperStrand	23	1	-10.5301
chr2	121061897	121061945	protein_coding	Trp53bp1	exon	ENSMUSG00000043909	ProperStrand	45	chr17	13112450	13112528	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	2	-8.4614
chr5	123321666	123321695	protein_coding	Kdm2b	utr3	ENSMUSG00000029475	ProperStrand	30	chr10	23505232	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.3011
chr14	32549962	32556446	protein_coding	Ankrd28	exon	ENSMUSG00000014496	ProperStrand	39	chr11	115133300	115133504	protein_coding	Fdxr	exon	ENSMUSG00000018861	NonProperStrand	6	1	-18.2987
chr8	125759637	125759655	protein_coding	Spata2l	exon	ENSMUSG00000033594	ProperStrand	1	chr16	23110827	23110851	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr7	133939311	133941017	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	chr11	116938557	116938750	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	19	-inf
chr4	115410557	115410578	protein_coding	4732418C07Rik	utr5	ENSMUSG00000034210	ProperStrand	16	chr15	37313435	37313452	protein_coding	Ncald	intron	ENSMUSG00000051359	ProperStrand	28	1	-17.3623
chr7	3607510	3607542	protein_coding	Cnot3	exon	ENSMUSG00000035632	ProperStrand	55	chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	1	-9.3626
chr11	115944847	115944906	protein_coding-noncoding	Wbp2	utr3	ENSMUSG00000034341	ProperStrand	3	chr5	130300534	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-inf
chr12	17552949	17553063	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr1	63225606	63225710	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	9	-6.2428
chr1	106585705	106585785	LINE	L1MA4	L1	chr1L1MA4106585625	NonProperStrand	1	chr1	106585226	106585316	LINE	Lx5	L1	chr1Lx5106585234	NonProperStrand	1	1	-inf
chr6	47876670	47876720	protein_coding	Zfp212	exon	ENSMUSG00000052763	ProperStrand	20	chr16	23110958	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-3.0614
chrX	20276233	20276333	protein_coding	Cdk16	utr3	ENSMUSG00000031065	ProperStrand	30	chr7	52382755	52382823	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-8.1388
chr17	45705984	45706197	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr6	87886583	87886600	protein_coding	8430410A17Rik	utr3	ENSMUSG00000030060	ProperStrand	22	9	-20.7657
chr17	37147369	37147404	protein_coding	Zfp57	exon	ENSMUSG00000036036	ProperStrand	39	chr19	8800086	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	2	-13.4905
chr15	89560587	89560603	Other	RMER1B	Other	chr15RMER1B89560285	NonProperStrand	1	chr19	38199482	38199498	protein_coding	Rbp4	exon	ENSMUSG00000024990	ProperStrand	2	1	-inf
chr19	43741412	43741428	protein_coding	Slc25a28	exon	ENSMUSG00000040414	NonProperStrand	1	chr11	48670540	48670562	tRNA	tRNA2021-LeuAAG	.	1864380	ProperStrand	13	1	-inf
chr1	185857228	185857244	protein_coding	1700056E22Rik	exon	ENSMUSG00000044854	ProperStrand	173	chr11	6428090	6428154	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.4446
chr11	48615894	48616964	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	chr17	25119916	25119933	protein_coding	Cramp1l	exon	ENSMUSG00000038002	ProperStrand	22	1	-11.8294
chr3	108235999	108236067	protein_coding	Sars	exon	ENSMUSG00000068739	ProperStrand	45	chr18	35714262	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-3.9783
chr5	137971483	137971501	protein_coding	Gnb2	exon	ENSMUSG00000029713	ProperStrand	23	chr18	35716763	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.8840
chr4	140374497	140374514	protein_coding	Padi1	intron	ENSMUSG00000025329	ProperStrand	11	chr5	3693225	3693242	protein_coding	Ankib1	exon	ENSMUSG00000040351	NonProperStrand	98	1	-15.8017
chr11	6519863	6519943	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	chr9	64143758	64143848	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	16	-inf
chr9	64024956	64024998	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	chr2	130101986	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-1.6306
chr5	19284183	19284199	protein_coding	Magi2	intron	ENSMUSG00000040003	ProperStrand	49	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	2	-12.9957
chr6	70794803	70794820	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chr9	110392362	110392379	protein_coding	Kif9	exon	ENSMUSG00000032489	NonProperStrand	1	1	-inf
chr15	41620675	41620692	protein_coding	Oxr1	exon	ENSMUSG00000022307	ProperStrand	21	chr12	17552949	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-7.1708
chr5	136386386	136386865	protein_coding	Ywhag	utr3	ENSMUSG00000051391	ProperStrand	142	chr9	15119646	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-2.4355
chr6	100227254	100227344	protein_coding	Rybp	intron	ENSMUSG00000072872	ProperStrand	51	chr12	60141350	60141430	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-7.1526
chr9	72586859	72586917	protein_coding	Nedd4	exon	ENSMUSG00000032216	ProperStrand	308	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-4.9599
chr7	107780352	107783159	protein_coding	Rab6a	exon	ENSMUSG00000030704	ProperStrand	23	chr1	74902715	74902731	protein_coding	Cdk5r2	exon	ENSMUSG00000090071	NonProperStrand	49	1	-15.6720
chr10	16844327	16844346	LINE	L1_Mur1	L1	chr10L1_Mur116843303	ProperStrand	76	chr1	162968442	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	3	-13.0305
chr4	3762662	3762695	protein_coding	Rps20	utr5	ENSMUSG00000028234	ProperStrand	71	chr1	162965984	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-3.2945
chr19	41970608	41970624	protein_coding	Rrp12	utr5	ENSMUSG00000035049	ProperStrand	106	chr5	151755616	151755632	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-6.6093
chr8	86097317	86097798	protein_coding	Tecr	exon	ENSMUSG00000031708	ProperStrand	100	chrX	84483701	84483737	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-7.2309
chr6	122678423	122678523	protein_coding	Slc2a3	utr3	ENSMUSG00000003153	ProperStrand	682	chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-3.1765
chr18	67829332	67829348	protein_coding	Ptpn2	intron	ENSMUSG00000024539	ProperStrand	35	chr16	23110962	23110999	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.8578
chr15	10504979	10504995	protein_coding	Rai14	exon	ENSMUSG00000022246	ProperStrand	180	chr17	35089181	35089237	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-3.4010
chr7	79347218	79347276	protein_coding	Mctp2	exon	ENSMUSG00000032776	ProperStrand	9	chr5	121655026	121655116	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-7.5103
chr8	27062446	27062463	protein_coding	Hgsnat	exon	ENSMUSG00000037260	ProperStrand	41	chr11	51551312	51551425	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	1	-8.4624
chr11	103235551	103235592	protein_coding	Plekhm1	intron	ENSMUSG00000034247	ProperStrand	23	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-8.5144
chr3	88714246	88714555	protein_coding	Msto1	exon	ENSMUSG00000068922	ProperStrand	36	chr16	23111775	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.7618
chr6	71540471	71540656	protein_coding	Kdm3a	exon	ENSMUSG00000053470	ProperStrand	41	chr7	117166789	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-5.5574
chr18	38416334	38416354	protein_coding	0610009O20Rik	intron	ENSMUSG00000024442	ProperStrand	25	chr14	65372842	65372889	snoRNA	ENSMUSG00000064442_SNORA36	.	ENSMUSG00000064442	ProperStrand	296	1	-11.8859
chr13	63612936	63612952	protein_coding	Ptch1	exon	ENSMUSG00000021466	NonProperStrand	118	chr17	45798189	45798213	protein_coding	Tmem63b	exon	ENSMUSG00000036026	ProperStrand	93	1	-11.0742
chr1	132586214	132586258	protein_coding	Pfkfb2	utr3	ENSMUSG00000026409	ProperStrand	8	chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	1	-12.2412
chr1	137180565	137180585	protein_coding	Rnpep	exon	ENSMUSG00000041926	ProperStrand	2	chrX	10081311	10081329	protein_coding	Tspan7	intron	ENSMUSG00000058254	NonProperStrand	3	1	-inf
chr15	81541919	81542103	protein_coding	Rangap1	exon	ENSMUSG00000022391	ProperStrand	69	chr18	35102297	35102342	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-6.3136
chr2	129025657	129025747	protein_coding	Slc20a1	exon	ENSMUSG00000027397	ProperStrand	81	chr4	131908266	131908346	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.0135
chr6	135093017	135093074	protein_coding	Hebp1	intron	ENSMUSG00000042770	ProperStrand	7	chr11	51551300	51551400	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	1	-12.1154
chr4	148800259	148800292	protein_coding	Ube4b	utr5	ENSMUSG00000028960	ProperStrand	66	chr3	89750435	89750451	protein_coding	Atp8b2	exon	ENSMUSG00000060671	ProperStrand	140	1	-11.4204
chr13	70752627	70752645	protein_coding	BC018507	intron	ENSMUSG00000034525	ProperStrand	43	chr5	92485085	92485185	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	1	-9.4089
chr11	30012880	30013924	protein_coding	Spnb2	exon	ENSMUSG00000020315	ProperStrand	103	chr10	23505152	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	14	-inf
chr2	154386841	154386874	protein_coding	E2f1	exon	ENSMUSG00000027490	ProperStrand	28	chr4	131865456	131865495	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-5.4736
chr1	90123798	90124639	protein_coding	Heatr7b1	utr5	ENSMUSG00000079429	ProperStrand	147	chr15	34370617	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	3	-5.4746
chr2	24910034	24910050	protein_coding	Nelf	utr5	ENSMUSG00000006476	NonProperStrand	20	chr19	8799597	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-8.9766
chr18	60936590	60936669	protein_coding	Rps14	exon	ENSMUSG00000024608	ProperStrand	154	chr19	14529419	14529437	protein_coding	Tle4	exon	ENSMUSG00000024642	NonProperStrand	4	3	-inf
chrX	71589886	71589903	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr4	122968653	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-3.2686
chr4	125640757	125640847	LINE	L1MEc	L1	chr4L1MEc125640687	NonProperStrand	1	chr4	125640610	125640700	LTR	ORR1E	MaLR	chr4ORR1E125640515	NonProperStrand	1	1	-inf
chr3	88899542	88899558	protein_coding	Fdps	exon	ENSMUSG00000059743	NonProperStrand	17	chr16	23110525	23110567	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.8009
chr10	80643990	80644079	protein_coding	Eef2	exon	ENSMUSG00000034994	NonProperStrand	20	chr18	15221607	15221623	protein_coding	Kctd1	exon	ENSMUSG00000036225	ProperStrand	16	1	-18.0974
chr15	94416715	94416736	protein_coding	Twf1	intron	ENSMUSG00000022451	ProperStrand	32	chr19	8963129	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.3834
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr11	45723144	45723160	protein_coding	Clint1	utr3	ENSMUSG00000006169	NonProperStrand	273	1	-3.0377
chr17	66198426	66198517	protein_coding	Ralbp1	utr3	ENSMUSG00000024096	ProperStrand	39	chr19	8963113	8963170	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-7.7565
chr4	43505656	43505721	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr1	166388264	166388349	protein_coding	Atp1b1	utr5	ENSMUSG00000026576	ProperStrand	67	2	-4.9916
chr6	115757145	115757822	protein_coding	Rpl32	exon	ENSMUSG00000057841	ProperStrand	137	chr4	131865856	131865946	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.4188
chr19	8798507	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	chr1	145626090	145626190	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	2	-2.4671
chr4	149024202	149024292	protein_coding	Pik3cd	utr3	ENSMUSG00000039936	ProperStrand	151	chr16	11239083	11239133	protein_coding	Gspt1	exon	ENSMUSG00000062203	ProperStrand	49	1	-11.8699
chr15	83207890	83207936	protein_coding	Pacsin2	utr3	ENSMUSG00000016664	ProperStrand	30	chr16	23110986	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0481
chr19	23291477	23291501	protein_coding	Smc5	intron	ENSMUSG00000024943	ProperStrand	146	chr18	35716715	35716835	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-4.2643
chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	chr18	54022213	54022230	protein_coding	Csnk1g3	utr5	ENSMUSG00000073563	ProperStrand	13	1	-11.7046
chr8	11312929	11312945	protein_coding	Col4a2	utr5	ENSMUSG00000031503	NonProperStrand	3	chr2	30199420	30199438	protein_coding	Nup188	utr3	ENSMUSG00000052533	ProperStrand	96	1	-18.7103
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr12	33505369	33505400	protein_coding	Nampt	utr5	ENSMUSG00000020572	ProperStrand	15	1	-9.1639
chr4	154532176	154532276	protein_coding	Ski	exon	ENSMUSG00000029050	ProperStrand	28	chr17	24857740	24857812	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.6557
chr9	75263845	75263863	lincRNA	4933433G15Rik	intron	ENSMUSG00000086295	ProperStrand	2	chr16	23110909	23110962	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-inf
chr15	63969559	63969575	protein_coding	Asap1	exon	ENSMUSG00000022377	NonProperStrand	47	chr7	116663632	116663679	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.9388
chr7	29762910	29762973	protein_coding	Eif3k	exon	ENSMUSG00000053565	ProperStrand	31	chr4	131865887	131865987	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.8751
chr6	29166237	29166253	protein_coding	Impdh1	exon	ENSMUSG00000003500	NonProperStrand	22	chr7	4469944	4470044	protein_coding	Tnni3	utr3	ENSMUSG00000035458	ProperStrand	5	1	-19.2616
chr1	152268927	152269668	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	chr13	58495962	58496010	protein_coding	Hnrnpk	exon	ENSMUSG00000021546	ProperStrand	117	1	-7.5748
chr11	120148960	120148976	protein_coding	Bahcc1	exon	ENSMUSG00000039741	NonProperStrand	268	chr1	162968442	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-3.2314
chr1	47526975	47527065	LINE	Lx4A	L1	chr1Lx4A47526487	ProperStrand	1	chr1	47527279	47527359	LINE	Lx4A	L1	chr1Lx4A47527263	NonProperStrand	1	1	-inf
chr11	116535921	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr2	93838654	93838700	protein_coding	Alkbh3	intron	ENSMUSG00000040174	ProperStrand	4	4	-inf
chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	2	-6.2083
chr1	136329291	136329310	protein_coding	Adipor1	utr3	ENSMUSG00000026457	ProperStrand	48	chr3	68889026	68889126	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-3.6671
chr1	120920052	120920086	protein_coding	Gli2	intron	ENSMUSG00000048402	ProperStrand	148	chr4	148649065	148649107	protein_coding	Kif1b	exon	ENSMUSG00000063077	ProperStrand	60	1	-11.5013
chr14	70843345	70843363	miRNA	Mir320	.	ENSMUSG00000065528	ProperStrand	6	chr3	157197294	157197311	protein_coding	Zranb2	utr5	ENSMUSG00000028180	ProperStrand	43	1	-18.2794
chr6	112760003	112760021	protein_coding	Srgap3	intron	ENSMUSG00000030257	ProperStrand	9	chr10	75322225	75322446	protein_coding	Mif	exon	ENSMUSG00000033307	ProperStrand	146	1	-15.4091
chr5	110715373	110715390	protein_coding	Pole	utr5	ENSMUSG00000007080	ProperStrand	125	chr2	166890840	166890858	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	1	-8.9104
chr9	21602970	21602986	protein_coding	Kank2	utr5	ENSMUSG00000032194	ProperStrand	196	chr1	162965980	162966035	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-1.5925
chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	chr13	51743580	51743664	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	2	-6.8819
chr10	86158252	86158430	protein_coding	Hsp90b1	exon	ENSMUSG00000020048	ProperStrand	396	chr17	13112491	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	4	-5.6240
chr2	172957825	172957841	antisense	1300015D01Rik	.	ENSMUSG00000087382	ProperStrand	34	chr2	144087382	144087463	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	2	-12.3076
chr8	70381004	70381020	protein_coding	Psd3	intron	ENSMUSG00000030465	ProperStrand	19	chr16	23111777	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.9396
chr10	80949474	80949539	protein_coding	Ncln	utr3	ENSMUSG00000020238	ProperStrand	18	chr1	162965530	162965553	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-9.1933
chr1	44159536	44159555	protein_coding	Kdelc1	intron	ENSMUSG00000026047	ProperStrand	22	chr4	122970482	122970526	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-9.4361
chr2	24534450	24534540	protein_coding	Cacna1b	exon	ENSMUSG00000004113	ProperStrand	83	chr5	130300460	130300540	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.9711
chr4	57868543	57868584	protein_coding	Gm20459	exon	ENSMUSG00000089945	ProperStrand	31	chr5	130300419	130300478	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-9.1914
chr2	51954433	51954451	protein_coding	Rif1	exon	ENSMUSG00000036202	ProperStrand	201	chr14	76245444	76246046	protein_coding	Tpt1	exon	ENSMUSG00000060126	ProperStrand	236	13	-19.0816
chr17	39979941	39980031	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr19	5798907	5798958	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	2	-3.3786
chr9	14397578	14397594	protein_coding	Amotl1	exon	ENSMUSG00000013076	ProperStrand	72	chr8	42374522	42374541	protein_coding	Pcm1	intron	ENSMUSG00000031592	ProperStrand	57	1	-13.0494
chr7	52309977	52309993	protein_coding	Prrg2	exon	ENSMUSG00000007837	NonProperStrand	281	chrX	141939470	141939530	protein_coding	Amot	utr5	ENSMUSG00000041688	ProperStrand	4	1	-15.9054
chr11	99885311	99885327	protein_coding	Krt33b	exon	ENSMUSG00000057723	NonProperStrand	352	chr5	115939543	115939613	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-4.4034
chrX	148352133	148352930	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	chr8	32260335	32260401	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-1.0513
chr7	127801092	127801183	protein_coding	Uqcrc2	exon	ENSMUSG00000030884	ProperStrand	26	chr2	120286264	120286281	protein_coding	Ganc	utr3	ENSMUSG00000062646	ProperStrand	4	1	-19.7365
chr15	33123961	33123981	protein_coding	Pgcp	intron	ENSMUSG00000039007	ProperStrand	9	chr8	73419683	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-6.8403
chr14	61398407	61398423	protein_coding	C1qtnf9	exon	ENSMUSG00000071347	ProperStrand	187	chr8	125565955	125566007	protein_coding	Gm20388	intron	ENSMUSG00000092329	NonProperStrand	203	1	-8.5924
chr1	132640340	132640357	protein_coding	AA986860	exon	ENSMUSG00000042510	NonProperStrand	8	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-11.8681
chr2	90235300	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chrX	83547356	83547372	protein_coding	Mageb4	intron	ENSMUSG00000035427	NonProperStrand	191	2	-4.1824
chr3	89400254	89400272	protein_coding	Kcnn3	intron	ENSMUSG00000000794	ProperStrand	7	chr16	23110455	23110475	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-6.6152
chr5	147022962	147023052	protein_coding	Rnf6	exon	ENSMUSG00000029634	ProperStrand	6	chr2	41199972	41199989	protein_coding	Lrp1b	exon	ENSMUSG00000049252	ProperStrand	376	1	-14.3931
chr9	70256541	70256639	protein_coding	Ccnb2	intron	ENSMUSG00000032218	ProperStrand	54	chr4	131908689	131908730	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.3702
chr11	5441912	5441948	protein_coding	Ccdc117	exon	ENSMUSG00000020482	ProperStrand	13	chr4	86232389	86232489	snoRNA	ENSMUSG00000088958_Scarna8	.	ENSMUSG00000088958	ProperStrand	366	2	-19.4751
chr19	41348803	41348819	protein_coding	Pik3ap1	exon	ENSMUSG00000025017	NonProperStrand	26	chr9	15118322	15118381	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-8.3706
chr2	116978749	116978849	protein_coding	Spred1	exon	ENSMUSG00000027351	ProperStrand	36	chr9	15119646	15119724	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-6.0511
chr9	78023111	78023150	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr5	27928709	27928827	protein_coding	Dpp6	intron	ENSMUSG00000061576	ProperStrand	35	1	-6.9466
chr17	56107026	56107044	protein_coding	Ccdc94	exon	ENSMUSG00000003208	ProperStrand	14	chr4	131866239	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-6.5082
chr14	55264486	55264521	protein_coding	Acin1	exon	ENSMUSG00000022185	ProperStrand	67	chr13	72100991	72101008	protein_coding	Irx1	utr5	ENSMUSG00000060969	NonProperStrand	15	1	-15.9040
chr6	70794802	70794820	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chr17	24857782	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-0.9159
chr15	77229293	77229315	LTR	MT2B	ERVL	chr15MT2B77229256	NonProperStrand	1	chr10	77052396	77052425	protein_coding	Pttg1ip	exon	ENSMUSG00000009291	ProperStrand	28	1	-inf
chr2	127358629	127358646	protein_coding	Prom2	intron	ENSMUSG00000027376	NonProperStrand	10	chr2	144091738	144091830	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	NonProperStrand	4	1	-19.9092
chr6	71832554	71832644	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	chr2	103880834	103880924	snoRNA	ENSMUSG00000087739_SCARNA21	.	ENSMUSG00000087739	ProperStrand	50	1	-5.9693
chr13	55233855	55233948	protein_coding	Zfp346	utr3	ENSMUSG00000021481	ProperStrand	22	chr16	23110986	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.4786
chr6	126743580	126743598	SINE	MIRb	MIR	chr6MIRb126743454	ProperStrand	18	chr11	62416951	62416969	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-8.4584
chr9	15119689	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	NonProperStrand	21	chr19	8963086	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-12.2840
chr8	73840349	73878428	protein_coding	Myo9b	intron	ENSMUSG00000004677	ProperStrand	78	chr18	35716701	35716843	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-3.2194
chr17	46658280	46658297	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr7	53089954	53089976	protein_coding	Grin2d	intron	ENSMUSG00000002771	NonProperStrand	31	1	-10.5626
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr7	120019728	120019745	protein_coding	Tead1	exon	ENSMUSG00000055320	NonProperStrand	41	1	-11.1728
chr19	7289972	7291938	protein_coding	Cox8a	exon	ENSMUSG00000035885	ProperStrand	32	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-9.4439
chr6	29833703	29833729	protein_coding	Ahcyl2	exon	ENSMUSG00000029772	ProperStrand	10	chr12	17553011	17553091	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-8.6970
chr4	137172455	137172480	protein_coding	Usp48	intron	ENSMUSG00000043411	ProperStrand	135	chr17	24857796	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.0797
chr8	90014292	90014354	lincRNA	C230036H16Rik	intron	ENSMUSG00000091862	ProperStrand	8	chr8	73419657	73419713	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-11.5924
chr1	75207814	75207834	protein_coding	Stk16	utr5	ENSMUSG00000026201	ProperStrand	17	chr11	87240285	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	1	-13.5561
chr1	13579711	13579801	protein_coding	Tram1	exon	ENSMUSG00000025935	ProperStrand	28	chr5	121655101	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.2085
chr19	27408788	27408805	protein_coding	Kcnv2	utr3	ENSMUSG00000047298	ProperStrand	3	chr7	116664841	116664924	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-8.6415
chrX	83547356	83547372	protein_coding	Mageb4	intron	ENSMUSG00000035427	NonProperStrand	191	chr9	78328373	78328417	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-4.0951
chr2	165904622	165904638	protein_coding	Sulf2	exon	ENSMUSG00000006800	ProperStrand	171	chr19	8799598	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-4.7212
chr4	149370130	149370160	protein_coding	H6pd	exon	ENSMUSG00000028980	ProperStrand	14	chr12	112779230	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	3	-17.4173
chr11	118900007	118900023	protein_coding	Cbx8	exon	ENSMUSG00000025578	ProperStrand	95	chr11	55296229	55296334	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	6	-21.4169
chr15	52900118	53177365	protein_coding	Ext1	utr3	ENSMUSG00000061731	ProperStrand	24	chr4	131908717	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-12.5699
chr19	53406810	53406826	protein_coding	Mxi1	intron	ENSMUSG00000025025	ProperStrand	51	chr3	144122343	144122368	protein_coding	Hs2st1	intron	ENSMUSG00000040151	ProperStrand	18	1	-16.0779
chr3	41459523	41459540	protein_coding	Sclt1	intron	ENSMUSG00000059834	NonProperStrand	6	chr4	131865461	131865493	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-8.6503
chr12	17931680	17931701	protein_coding	B430203G13Rik	utr3	ENSMUSG00000067356	ProperStrand	4	chr11	69481385	69481475	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	4	-inf
chr17	15613029	15613084	protein_coding	Psmb1	exon	ENSMUSG00000014769	ProperStrand	19	chr19	8963091	8963185	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-10.6673
chr13	104840853	104840869	protein_coding	Nln	exon	ENSMUSG00000021710	ProperStrand	47	chr4	131908752	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-2.9428
chrX	98008727	98009565	protein_coding	Dlg3	exon	ENSMUSG00000000881	ProperStrand	7	chr17	24857816	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	3	-15.3364
chrX	6734264	6734354	protein_coding	Clcn5	utr3	ENSMUSG00000004317	ProperStrand	7	chr16	23110911	23110991	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.4785
chr11	79871360	79871376	protein_coding	Crlf3	exon	ENSMUSG00000017561	ProperStrand	47	chr1	162968443	162968481	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-6.5621
chr16	24984504	24984521	protein_coding	Lpp	utr3	ENSMUSG00000033306	ProperStrand	38	chr18	35714144	35714252	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	NonProperStrand	47	1	-14.7481
chr13	99288615	99288633	SINE	PB1	Alu	chr13PB199288602	ProperStrand	1	chr14	76906575	76906637	protein_coding	Tsc22d1	utr3	ENSMUSG00000022010	ProperStrand	86	1	-inf
chr13	51743539	51743622	protein_coding	Cks2	intron	ENSMUSG00000062248	ProperStrand	26	chr2	130101988	130102078	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-7.0135
chr4	122968582	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	chr4	131866159	131866279	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	16	-5.1331
chr11	6248744	6249125	protein_coding	Ogdh	exon	ENSMUSG00000020456	NonProperStrand	9	chr11	97641498	97641588	protein_coding	Rpl23	intron	ENSMUSG00000071415	NonProperStrand	4	3	-19.7677
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr1	181027187	181027205	protein_coding	Smyd3	intron	ENSMUSG00000055067	ProperStrand	231	1	-3.3378
chr2	179936691	179936764	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr18	68001296	68001396	protein_coding	Cep192	exon	ENSMUSG00000024542	ProperStrand	59	1	-9.7300
chr15	76734813	76734862	protein_coding	Rpl8	exon	ENSMUSG00000003970	ProperStrand	191	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.3047
chr19	10823569	10823587	protein_coding	A430093F15Rik	intron	ENSMUSG00000067577	NonProperStrand	34	chr5	121655099	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.8293
chr9	120038289	120038311	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-4.4702
chr12	61862794	61862874	LINE	L1Md_A	L1	chr12L1Md_A61862795	NonProperStrand	1	chr5	127866547	127866637	protein_coding	Tmem132c	intron	ENSMUSG00000034324	NonProperStrand	6	1	-inf
chr15	79746911	79746941	protein_coding	Cbx7	utr3	ENSMUSG00000053411	ProperStrand	62	chr7	118219574	118219633	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	3	-9.9715
chr4	116826571	116826972	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-2.4894
chr14	15572355	15572371	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr8	96829953	96830019	protein_coding	Nup93	exon	ENSMUSG00000032939	ProperStrand	43	1	-11.9559
chr11	69483610	69483700	protein_coding-noncoding	Eif4a1	utr3	ENSMUSG00000059796	NonProperStrand	1	chr4	131908236	131908277	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-inf
chr7	129305941	129307574	protein_coding	Plk1	exon	ENSMUSG00000030867	ProperStrand	146	chr1	154685173	154685209	protein_coding	Smg7	utr3	ENSMUSG00000042772	ProperStrand	88	1	-10.7585
chr13	73952719	73952736	protein_coding	Slc12a7	utr3	ENSMUSG00000017756	ProperStrand	80	chr18	35714144	35714260	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	5	-13.0054
chr11	72265646	72265701	protein_coding	Spns2	utr3	ENSMUSG00000040447	ProperStrand	20	chr12	88778631	88778722	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-8.7045
chr3	94976207	94976297	protein_coding	Sema6c	exon	ENSMUSG00000038777	ProperStrand	30	chr4	131865393	131865473	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-5.3377
chr8	129468746	129468780	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	chr11	116938651	116938751	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	13	-5.6353
mmu-miR-6240	3	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr2	25105896	25107254	protein_coding	Ndor1	exon	ENSMUSG00000006471	NonProperStrand	84	1	-5.2460
chr7	130324928	130324957	protein_coding	Tnrc6a	exon	ENSMUSG00000052707	ProperStrand	37	chr12	81492645	81492735	snoRNA	ENSMUSG00000088158_Scarna3b	.	ENSMUSG00000088158	ProperStrand	147	1	-12.4907
chr13	54692270	54692337	protein_coding	Higd2a	utr3	ENSMUSG00000025868	ProperStrand	5	chr10	110918549	110918639	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-8.4568
chr9	64023726	64023746	snoRNA	ENSMUSG00000064918_SNORD18	.	ENSMUSG00000064918	ProperStrand	370	chr5	108336377	108336490	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-1.6572
chr3	89263277	89263332	protein_coding	Pmvk	utr5	ENSMUSG00000027952	ProperStrand	9	chr5	74489599	74489679	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	3	-17.3606
chr7	16760821	16760837	protein_coding	Meis3	utr5	ENSMUSG00000041420	NonProperStrand	1	chr7	116663715	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-inf
chr3	38361854	38361944	protein_coding	Ankrd50	exon	ENSMUSG00000044864	ProperStrand	36	chr5	130300461	130300541	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.4201
chr3	144748059	144749264	protein_coding	Clca5	exon	ENSMUSG00000036960	ProperStrand	86	chr17	35299506	35299554	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-4.0911
chr11	120339001	120339018	protein_coding	Hgs	intron	ENSMUSG00000025793	ProperStrand	20	chr7	134669386	134671932	protein_coding	Srcap	exon	ENSMUSG00000053877	ProperStrand	69	1	-15.2544
chr15	12200935	12201025	protein_coding	Mtmr12	utr3	ENSMUSG00000039458	ProperStrand	16	chr16	23110907	23110987	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-3.6512
chr10	76521914	76522040	protein_coding	Col18a1	exon	ENSMUSG00000001435	ProperStrand	287	chr1	162966826	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	3	-8.1952
chr6	129533251	129534179	protein_coding	Klre1	exon	ENSMUSG00000050241	NonProperStrand	20	chr17	39985351	39985451	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	4	-20.5268
chr5	8073313	8073360	protein_coding	Adam22	utr3	ENSMUSG00000040537	ProperStrand	16	chr2	22444552	22444602	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	3	-19.5871
chr1	137366373	137366393	protein_coding	Nav1	exon	ENSMUSG00000009418	ProperStrand	38	chr4	130305566	130305620	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	1	-10.8305
chrX	14816748	14816828	LINE	MusHAL1	L1	chrXMusHAL114816696	NonProperStrand	1	chrX	14816561	14816651	Simple_repeat	(TTTTG)n	Simple_repeat	chrX(TTTTG)n14816576	NonProperStrand	1	1	-inf
chr7	54107306	54107322	protein_coding	Ldha	exon	ENSMUSG00000063229	ProperStrand	280	chr7	116664819	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-1.0076
chr17	25080829	25080929	protein_coding	Hn1l	utr3	ENSMUSG00000024165	ProperStrand	45	chr16	32230673	32230691	protein_coding	Fbxo45	utr3	ENSMUSG00000035764	NonProperStrand	10	1	-17.6220
chr12	48719823	48719903	LTR	RMER6-int	ERVK	chr12RMER6-int48719820	ProperStrand	1	chr12	48720068	48720158	LTR	RMER6-int	ERVK	chr12RMER6-int48720068	ProperStrand	1	1	-inf
chr9	46038498	46038515	protein_coding	Apoa1	utr3	ENSMUSG00000032083	NonProperStrand	1	chr16	23110911	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr2	64943054	64943074	protein_coding	Cobll1	intron	ENSMUSG00000034903	NonProperStrand	4	chr9	15118518	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	1	-15.0196
chr18	57412089	57412107	protein_coding	Megf10	intron	ENSMUSG00000024593	NonProperStrand	25	chr4	116827121	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-8.7986
chr2	105012751	105012769	protein_coding	Wt1	utr3	ENSMUSG00000016458	NonProperStrand	338	chr9	64022854	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-4.6338
chr8	53445557	53445608	LTR	RLTR10D	ERVK	chr8RLTR10D53445552	ProperStrand	3	chr16	23111383	23111505	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-inf
chr5	145509891	145509908	protein_coding	Tmem130	intron	ENSMUSG00000043388	ProperStrand	26	chr11	116938718	116938751	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-7.8289
chr16	31805731	31812764	protein_coding	Dlg1	exon	ENSMUSG00000022770	ProperStrand	69	chr11	6428033	6428104	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.9417
chr4	132752240	132752322	protein_coding	Wasf2	utr3	ENSMUSG00000028868	ProperStrand	56	chr4	131908718	131908808	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.3189
chr10	77996382	77996472	LINE	L1_Mur2	L1	chr10L1_Mur277996365	ProperStrand	1	chr1	143157882	143157962	LINE	L1_Mm	L1	chr1L1_Mm143157298	ProperStrand	1	1	-inf
chr15	58258193	58258224	protein_coding	D15Ertd621e	exon	ENSMUSG00000037119	ProperStrand	26	chr4	131865933	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.1929
chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	chr6	115758060	115758117	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-1.9926
chr2	26767620	26767677	protein_coding	Rpl7a	exon	ENSMUSG00000062647	ProperStrand	234	chr7	117189863	117189944	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	4	-11.8791
chr7	140951254	140951270	protein_coding	Dhx32	exon	ENSMUSG00000030986	ProperStrand	100	chr1	162965531	162965598	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.3792
chr12	13386801	13386818	protein_coding	Nbas	intron	ENSMUSG00000020576	NonProperStrand	23	chr9	44189441	44189931	protein_coding	Hyou1	exon	ENSMUSG00000032115	ProperStrand	145	1	-13.4830
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr19	8798740	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	2	-1.7648
chr16	12360074	12360092	LTR	IAPLTR2b	ERVK	chr16IAPLTR2b12359785	NonProperStrand	28	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-9.2727
chr6	125263436	125263453	protein_coding	Ltbr	exon	ENSMUSG00000030339	NonProperStrand	1	chr7	116663634	116663724	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-inf
chr3	95994288	95994305	protein_coding	Sv2a	exon	ENSMUSG00000038486	NonProperStrand	3	chr1	145626057	145626137	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-15.2101
chr1	124298935	124298951	LINE	Lx3_Mus	L1	chr1Lx3_Mus124298684	ProperStrand	10	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	2	-inf
chr8	13159388	13159405	protein_coding	Lamp1	exon	ENSMUSG00000031447	ProperStrand	92	chr1	184271700	184271716	protein_coding	Fbxo28	exon	ENSMUSG00000047539	ProperStrand	27	1	-14.0719
chr19	5799758	5802156	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr2	26494708	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	6	-0.9218
chr16	8858012	8858032	protein_coding	1810013L24Rik	utr3	ENSMUSG00000022507	ProperStrand	20	chr7	116663688	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	6	-20.3431
chr2	164143353	164143369	protein_coding	Svs6	utr3	ENSMUSG00000017000	ProperStrand	11	chr10	95019439	95019503	protein_coding	Nudt4	intron	ENSMUSG00000020029	ProperStrand	32	1	-17.7768
chr1	55054015	55058375	protein_coding	Sf3b1	exon	ENSMUSG00000025982	ProperStrand	158	chr4	131865390	131865503	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	8	-18.9255
chr5	31551944	31552044	protein_coding	Nrbp1	exon	ENSMUSG00000029148	ProperStrand	10	chr7	67123693	67123737	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	1	-13.2059
chr4	106082240	106082330	protein_coding	Usp24	exon	ENSMUSG00000028514	ProperStrand	74	chr9	120037946	120038026	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-4.3050
chr11	78214290	78214306	antisense	Gm11194	.	ENSMUSG00000085747	ProperStrand	35	chr2	77753577	77753595	protein_coding	Cwc22	exon	ENSMUSG00000027014	NonProperStrand	6	1	-18.4708
chr11	78088657	78088675	protein_coding	2610507B11Rik	exon	ENSMUSG00000010277	ProperStrand	246	chr13	51743653	51743703	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-4.1213
chr4	136876784	136876813	protein_coding	Cdc42	utr3	ENSMUSG00000006699	ProperStrand	38	chr1	164648896	164648986	protein_coding	Prrc2c	exon	ENSMUSG00000040225	ProperStrand	413	1	-10.3702
chr17	86339609	86339626	SINE	ID	ID	chr17ID86339609	NonProperStrand	9	chr13	96100565	96100691	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	1	-11.9486
chr1	30952366	30952384	LTR	MTE2b	MaLR	chr1MTE2b30952320	NonProperStrand	1	chr10	127560171	127560230	protein_coding	Baz2a	exon	ENSMUSG00000040054	ProperStrand	274	1	-inf
chr9	30235085	30235102	protein_coding	Snx19	exon	ENSMUSG00000031993	ProperStrand	353	chr2	144087411	144087463	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-3.1635
chr19	8782456	8782556	protein_coding	Slc3a2	exon	ENSMUSG00000010095	ProperStrand	63	chr12	110874233	110874291	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	1	-9.8796
chr4	155544278	155544452	protein_coding	Agrn	exon	ENSMUSG00000041936	ProperStrand	175	chr11	97642971	97643051	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	5	-5.7658
chr11	120681582	120681631	protein_coding	Fasn	exon	ENSMUSG00000025153	NonProperStrand	5	chr16	23111388	23111500	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	NonProperStrand	38	1	-18.4585
chr12	66176667	66176765	protein_coding	Fancm	utr5	ENSMUSG00000055884	ProperStrand	16	chr19	8798767	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	2	-11.9840
chrX	20435878	20435999	protein_coding	Araf	exon	ENSMUSG00000001127	ProperStrand	23	chr1	162966007	162966041	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-5.4450
chr2	168024862	168024899	processed_transcript	RP23-391M18.7	.	ENSMUSG00000093752	ProperStrand	14	chr2	158182179	158182298	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	4	-inf
chr1	162286088	162286104	protein_coding	Rabgap1l	intron	ENSMUSG00000026721	ProperStrand	44	chr17	35089181	35089230	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-6.0949
chr12	110889662	110889681	snoRNA	ENSMUSG00000064496_SNORD113	.	ENSMUSG00000064496	ProperStrand	37	chr8	73419657	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.0248
chr1	180262442	180263140	protein_coding	Hnrnpu	exon	ENSMUSG00000039630	ProperStrand	286	chr7	148634750	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-1.3447
chr11	100285419	100285489	protein_coding	Fkbp10	utr3	ENSMUSG00000001555	ProperStrand	3	chr5	89663839	89663855	protein_coding	Slc4a4	exon	ENSMUSG00000060961	NonProperStrand	195	1	-17.4939
chr13	21871839	21871929	protein_coding	Hist1h1b	exon	ENSMUSG00000058773	ProperStrand	65	chr14	76247754	76247834	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-4.0209
chr1	91689038	91689105	protein_coding	Agap1	intron	ENSMUSG00000055013	ProperStrand	229	chr14	76246047	76246068	protein_coding	Tpt1	exon	ENSMUSG00000060126	ProperStrand	236	2	-12.5917
chr4	128867196	128867212	protein_coding	Yars	exon	ENSMUSG00000028811	ProperStrand	131	chr11	106362659	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-5.8615
chr2	110456965	110456981	protein_coding	Slc5a12	exon	ENSMUSG00000041644	ProperStrand	5	chr16	23110959	23110990	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-7.3377
chr5	117542475	117542565	protein_coding	Suds3	utr3	ENSMUSG00000066900	ProperStrand	22	chr2	26493405	26493485	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-5.6800
chr17	46716256	46716308	protein_coding	Ptk7	exon	ENSMUSG00000023972	ProperStrand	101	chr3	19528533	19528550	protein_coding	1700064H15Rik	exon	ENSMUSG00000082766	NonProperStrand	78	1	-11.7401
chr2	26494708	26494808	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	chr2	18508668	18508717	tRNA	tRNA1947-AsnGTT	.	1807717	ProperStrand	179	1	-1.3289
chr19	5845362	5845384	non_coding	Neat1	.	ENSMUSG00000092274	ProperStrand	63	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	2	-11.0949
chr4	64785558	64785574	protein_coding	Pappa	utr5	ENSMUSG00000028370	ProperStrand	65	chr16	23111721	23111811	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.7776
chr9	56266647	56266665	protein_coding	Hmg20a	utr5	ENSMUSG00000032329	ProperStrand	87	chr8	96805213	96810443	protein_coding	Nup93	exon	ENSMUSG00000032939	ProperStrand	43	1	-13.2411
chr2	119430543	119430633	lincRNA	1700020I14Rik	exon	ENSMUSG00000085438	ProperStrand	15	chr16	23111393	23111473	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.5828
chr17	35089182	35089199	processed_transcript	1110038B12Rik	.	ENSMUSG00000092203	ProperStrand	126	chrX	71517838	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-5.0928
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	185857228	185857244	protein_coding	1700056E22Rik	exon	ENSMUSG00000044854	ProperStrand	173	2	-4.4456
chr2	32819264	32819311	protein_coding	Rpl12	exon	ENSMUSG00000038900	ProperStrand	167	chr14	119693352	119693368	protein_coding	Hs6st3	intron	ENSMUSG00000053465	NonProperStrand	134	1	-9.6473
chr3	85942714	85942778	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	chr19	8799581	8799622	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	4	-11.1519
chr14	31829529	31829566	protein_coding	Gnl3	exon	ENSMUSG00000042354	ProperStrand	53	chr7	116664813	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-7.1834
chr1	133141546	133141562	protein_coding	Rassf5	exon	ENSMUSG00000026430	ProperStrand	73	chr4	131399490	131399506	protein_coding	Mecr	exon	ENSMUSG00000028910	NonProperStrand	109	1	-11.7198
chr11	101385952	101386042	protein_coding	Brca1	exon	ENSMUSG00000017146	ProperStrand	51	chr4	131908264	131908344	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.6592
chr5	135637399	135637469	protein_coding	Tbl2	utr3	ENSMUSG00000005374	ProperStrand	28	chr9	15118332	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-4.9141
chr11	68615188	68615656	protein_coding	Myh10	exon	ENSMUSG00000020900	ProperStrand	91	chrX	34622924	34623004	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-2.4403
chr9	55054024	55054065	protein_coding	Ube2q2	utr3	ENSMUSG00000032307	ProperStrand	17	chr9	116875139	116875158	protein_coding	Rbms3	intron	ENSMUSG00000039607	NonProperStrand	54	1	-16.1044
chr7	140833058	140835718	protein_coding	2700050L05Rik	exon	ENSMUSG00000039990	ProperStrand	14	chr16	23110931	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-6.1935
chr5	137813739	137814768	protein_coding	Ephb4	exon	ENSMUSG00000029710	ProperStrand	49	chr17	35089182	35089210	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	3	-13.5982
chr17	25283313	25283329	protein_coding	Clcn7	exon	ENSMUSG00000036636	NonProperStrand	34	chr18	35716787	35716806	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.1571
chr1	138382212	138382230	protein_coding	Kif14	intron	ENSMUSG00000041498	NonProperStrand	36	chr17	35299505	35299613	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	6	-20.0781
chr3	30870587	30870604	LTR	MTC-int	MaLR	chr3MTC-int30869993	ProperStrand	3	chr9	83678799	83681878	protein_coding	Elovl4	exon	ENSMUSG00000032262	ProperStrand	159	1	-17.8426
chr7	146684406	146684425	protein_coding	Inpp5a	intron	ENSMUSG00000025477	ProperStrand	166	chr2	26494708	26494760	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-2.7009
chr19	29099023	29099075	protein_coding	Ak3	intron	ENSMUSG00000024782	ProperStrand	7	chr10	90581034	90581136	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-9.1626
chr10	41239518	41239618	protein_coding	Cd164	intron	ENSMUSG00000019818	ProperStrand	38	chr17	24665481	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-5.8336
chr10	127152705	127152721	protein_coding	Myo1a	exon	ENSMUSG00000025401	ProperStrand	93	chr7	73170482	73176644	protein_coding	Pcsk6	exon	ENSMUSG00000030513	ProperStrand	32	1	-13.7039
chrX	132806397	132806424	protein_coding	Ngfrap1	utr3	ENSMUSG00000046432	ProperStrand	28	chr12	112779190	112779283	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	5	-19.1308
chr7	34904214	34910525	protein_coding	Wtip	exon	ENSMUSG00000036459	ProperStrand	19	chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	1	-11.0918
chr2	62510485	62517231	protein_coding	Gca	exon	ENSMUSG00000026893	ProperStrand	8	chr9	15119733	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-6.5261
chr8	13876100	13876190	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	chr18	35714143	35714278	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	8	-1.7977
mmu-miR-2137	0	19	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	chr16	91785592	91793863	protein_coding	Itsn1	exon	ENSMUSG00000022957	ProperStrand	172	1	-9.4444
chr8	11217915	11218015	protein_coding	Col4a1	exon	ENSMUSG00000031502	ProperStrand	64	chr11	97642952	97642999	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.3622
chr12	77066968	77066984	protein_coding	Syne2	exon	ENSMUSG00000063450	ProperStrand	63	chr4	131908356	131908450	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.3492
chr10	85512442	85512459	protein_coding	Fbxo7	utr3	ENSMUSG00000001786	ProperStrand	13	chr2	25915656	25915672	protein_coding	Nacc2	exon	ENSMUSG00000026932	ProperStrand	98	1	-15.4527
chr6	67236301	67236391	protein_coding	Serbp1	utr3	ENSMUSG00000036371	ProperStrand	261	chr4	131866153	131866233	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	4	-5.3370
chr19	53692594	53692974	protein_coding	Smc3	exon	ENSMUSG00000024974	ProperStrand	61	chr11	69483157	69483247	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-4.2886
chr17	34251566	34251653	protein_coding	Brd2	intron	ENSMUSG00000024335	ProperStrand	69	chr1	162965539	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.0243
chr14	51427289	51427379	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr18	33954817	33954930	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	8	-2.0759
chr9	57493103	57493183	protein_coding	Csk	utr5	ENSMUSG00000032312	ProperStrand	17	chr2	26493381	26493471	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-6.1967
chr5	143665619	143665818	protein_coding	Actb	exon	ENSMUSG00000029580	ProperStrand	446	chr7	116663715	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-0.7653
chr13	49218439	49218455	protein_coding	Wnk2	intron	ENSMUSG00000037989	NonProperStrand	67	chr4	131865867	131865980	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.5997
chr4	43505652	43505723	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr5	77738129	77738177	protein_coding	Noa1	exon	ENSMUSG00000036285	ProperStrand	147	5	-8.4201
chr11	117516262	117516362	protein_coding	Tnrc6c	utr5	ENSMUSG00000025571	ProperStrand	51	chr10	90581034	90581087	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-5.1219
chr19	9047495	9047518	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	chr9	15119972	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	3	-8.7521
chr5	97523455	97523545	protein_coding	Paqr3	intron	ENSMUSG00000055725	ProperStrand	10	chr8	129468778	129468858	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-7.9945
chr2	22445656	22445717	pseudogene	Gm13339	.	ENSMUSG00000082884	ProperStrand	24	chr16	23110829	23110873	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.3518
chr11	105186830	105186930	protein_coding	Mrc2	exon	ENSMUSG00000020695	ProperStrand	12	chr9	120039626	120039683	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-6.4506
chr4	82869769	82869859	protein_coding	Ttc39b	utr3	ENSMUSG00000038172	ProperStrand	78	chr19	8963096	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	20	-inf
chr4	131865855	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr1	173041632	173041649	tRNA	tRNA710-ValCAC	.	1238333	ProperStrand	206	2	-0.7529
chr16	20683642	20687457	protein_coding	Eif4g1	exon	ENSMUSG00000045983	ProperStrand	199	chr11	69483136	69483278	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-1.5048
chr17	8720218	8720234	protein_coding	Pde10a	intron	ENSMUSG00000023868	ProperStrand	25	chr15	79913308	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-5.2686
chr6	112667978	112668068	protein_coding	Srgap3	utr3	ENSMUSG00000030257	ProperStrand	9	chr3	123210902	123210982	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-9.3504
chr4	125816910	125817006	protein_coding	Stk40	utr3	ENSMUSG00000042608	ProperStrand	32	chr16	23111372	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	10	-19.0684
chr10	41239366	41239466	protein_coding	Cd164	exon	ENSMUSG00000019818	ProperStrand	38	chr3	123210854	123210907	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.8448
chr17	85106509	85107453	protein_coding	Lrpprc	exon	ENSMUSG00000024120	ProperStrand	98	chr18	35714245	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-2.5693
chr11	3649570	3649587	protein_coding	Osbp2	intron	ENSMUSG00000020435	ProperStrand	60	chr16	23111689	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.9032
chr9	122965553	122965570	protein_coding	Tgm4	exon	ENSMUSG00000025787	NonProperStrand	11	chr17	24665446	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-8.3441
chr2	4827762	4827839	protein_coding	Sephs1	exon	ENSMUSG00000026662	ProperStrand	20	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-9.1951
chr4	43505703	43505783	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr8	86186196	86186286	protein_coding	Gipc1	exon	ENSMUSG00000019433	ProperStrand	60	1	-3.0703
chr12	112909982	112910082	protein_coding	Ckb	exon	ENSMUSG00000001270	ProperStrand	28	chr1	136930495	136930513	protein_coding	Lgr6	intron	ENSMUSG00000042793	ProperStrand	5	1	-19.5654
chr4	148608847	148608864	protein_coding	Kif1b	utr3	ENSMUSG00000063077	NonProperStrand	19	chr11	62416599	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-7.4528
chr2	72243878	72243894	protein_coding	B230120H23Rik	utr3	ENSMUSG00000004085	NonProperStrand	26	chr13	54763335	54763390	protein_coding	Faf2	utr3	ENSMUSG00000025873	ProperStrand	90	1	-14.1932
chr9	123760677	123760693	protein_coding	Fyco1	utr5	ENSMUSG00000025241	ProperStrand	31	chr9	59523483	59525892	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	2	-13.5496
chr7	52378855	52378919	protein_coding	Rps11	exon	ENSMUSG00000003429	ProperStrand	49	chr15	79249334	79249423	protein_coding	Csnk1e	utr3	ENSMUSG00000022433	ProperStrand	59	2	-21.2157
chr11	106362325	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	chr11	98878383	98878453	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	3	-1.2673
chr4	131888081	131888151	protein_coding	Rcc1	utr3	ENSMUSG00000028896	ProperStrand	55	chr8	73419657	73419727	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.2879
chr18	61715369	61715386	protein_coding	Csnk1a1	utr5	ENSMUSG00000024576	NonProperStrand	35	chr2	138188029	138188045	protein_coding	Btbd3	intron	ENSMUSG00000062098	NonProperStrand	121	1	-12.9933
chr19	47343190	47343207	protein_coding	Sh3pxd2a	exon	ENSMUSG00000053617	ProperStrand	57	chr4	131865392	131865458	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	3	-9.9576
chr4	43597827	43597843	protein_coding	Rgp1	utr3	ENSMUSG00000028468	ProperStrand	22	chr17	13115659	13115783	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	1	-9.5558
chr9	65049532	65049622	snRNA	ENSMUSG00000075930_U5	.	ENSMUSG00000075930	ProperStrand	175	chr10	90581048	90581128	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-2.8235
chr5	113692673	113692763	protein_coding	Sgsm1	exon	ENSMUSG00000042216	ProperStrand	20	chr16	23111373	23111453	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.0472
chr3	144375621	144375662	protein_coding	Sh3glb1	exon	ENSMUSG00000037062	ProperStrand	9	chr19	8800355	8800444	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-7.2762
chr17	85152527	85152830	protein_coding	Lrpprc	exon	ENSMUSG00000024120	NonProperStrand	2	chr19	41313258	41313303	protein_coding	Tm9sf3	exon	ENSMUSG00000025016	NonProperStrand	3	1	-inf
chr2	151561279	151561331	protein_coding	Psmf1	exon	ENSMUSG00000032869	ProperStrand	11	chr16	23111777	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.0138
chr2	4829164	4829180	protein_coding	Sephs1	utr3	ENSMUSG00000026662	NonProperStrand	271	chrX	71589890	71589908	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	1	-7.1409
chr3	116588056	116588139	protein_coding	Frrs1	exon	ENSMUSG00000033386	ProperStrand	27	chr9	120038552	120038642	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.5315
chr16	32663986	32668316	protein_coding	Tnk2	exon	ENSMUSG00000022791	ProperStrand	86	chr15	79913288	79913343	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.9395
chrX	70237450	70237471	miRNA	Mir2137	.	ENSMUSG00000089357	ProperStrand	50	chr2	22812547	22812564	protein_coding	Abi1	exon	ENSMUSG00000058835	NonProperStrand	2	1	-inf
chr11	102014428	102014509	protein_coding	Tmem101	utr3	ENSMUSG00000020921	ProperStrand	34	chr8	109207051	109207104	protein_coding	Tmco7	utr5	ENSMUSG00000041949	ProperStrand	30	7	-inf
chr16	18960881	18960918	protein_coding	Hira	intron	ENSMUSG00000022702	ProperStrand	28	chr4	131908688	131908808	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.4067
chr2	95994183	95994273	LTR	ORR1A4-int	MaLR	chr2ORR1A4-int95993758	ProperStrand	1	chr19	47757782	47757872	protein_coding	Col17a1	intron	ENSMUSG00000025064	NonProperStrand	4	1	-inf
chr9	56961772	56961804	protein_coding	Sin3a	intron	ENSMUSG00000042557	ProperStrand	108	chr5	74489595	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	4	-9.5734
chr2	148437191	148437271	LINE	Lx5	L1	chr2Lx5148436312	ProperStrand	1	chr2	148437617	148437707	LINE	Lx5	L1	chr2Lx5148437438	ProperStrand	1	1	-inf
chr15	98356842	98356899	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	chr8	32260335	32260419	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	6	-4.4990
chr2	76512750	76512768	SINE	RSINE1	B4	chr2RSINE176512727	NonProperStrand	4	chr11	69483136	69483239	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-18.8087
chr9	64022775	64023053	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	chr8	8689983	8690073	protein_coding	Arglu1	exon	ENSMUSG00000040459	ProperStrand	20	1	-10.9027
chr6	94776842	94776877	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	chr18	35716685	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	6	-1.6064
chr2	3697598	3697614	protein_coding	Fam107b	utr3	ENSMUSG00000026655	NonProperStrand	15	chr14	39426970	39426991	protein_coding	Nrg3	intron	ENSMUSG00000041014	ProperStrand	9	1	-19.8655
chr6	35211289	35211376	lincRNA	1810058I24Rik	exon	ENSMUSG00000073155	ProperStrand	2	chr2	158182156	158182213	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-12.4042
chr9	103401280	103401296	protein_coding	Tmem108	exon	ENSMUSG00000042757	NonProperStrand	323	chr4	15193454	15193493	protein_coding	Tmem64	exon	ENSMUSG00000043252	ProperStrand	32	1	-11.2094
chr1	53409486	53409502	protein_coding	Asnsd1	utr5	ENSMUSG00000026095	NonProperStrand	105	chr7	30074413	30074429	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-9.3057
chr15	96825926	96825950	protein_coding	Slc38a4	utr3	ENSMUSG00000022464	ProperStrand	139	chr11	6428060	6428154	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-3.2456
chr13	65393318	65393334	protein_coding	Zfp369	exon	ENSMUSG00000021514	NonProperStrand	5	chr15	82980134	82980189	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-12.2905
chr15	96262257	96262797	protein_coding	Scaf11	exon	ENSMUSG00000033228	ProperStrand	37	chr8	129468744	129468780	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-5.3493
chr1	64778132	64778168	protein_coding	Fzd5	utr3	ENSMUSG00000045005	ProperStrand	175	chr7	117166764	117166859	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	8	-19.7718
chr17	88972093	88974554	protein_coding	Klraq1	exon	ENSMUSG00000034709	ProperStrand	6	chr8	129468746	129468836	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-9.0857
chr7	87245670	87245711	protein_coding	Idh2	exon	ENSMUSG00000030541	ProperStrand	21	chr7	116663635	116663710	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.4437
chr8	122429887	122429903	SINE	B1_Mur4	Alu	chr8B1_Mur4122429833	NonProperStrand	12	chr13	63612936	63612952	protein_coding	Ptch1	exon	ENSMUSG00000021466	NonProperStrand	118	1	-15.2500
chr16	19811914	19811935	LINE	Lx5	L1	chr16Lx519811611	ProperStrand	1	chr16	23110907	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr17	25099413	25099430	protein_coding	Cramp1l	utr3	ENSMUSG00000038002	ProperStrand	22	chr19	8799042	8799092	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-7.8356
chr12	25743668	25743758	protein_coding	Kidins220	utr3	ENSMUSG00000036333	ProperStrand	26	chr11	101466286	101466366	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	1	-10.5602
chr2	34635024	34635045	protein_coding	Rabepk	exon	ENSMUSG00000070953	ProperStrand	5	chr4	131908804	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.7672
chr4	131866228	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	chr7	106628074	106628102	snoRNA	ENSMUSG00000064966_Snord15b	.	ENSMUSG00000064966	ProperStrand	74	1	-3.2801
chr16	23111372	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	chr15	98356771	98356908	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	17	-0.8282
chr19	46146700	46146800	protein_coding	Pprc1	exon	ENSMUSG00000055491	ProperStrand	143	chr1	88247778	88247804	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-3.4551
chrX	147418736	147418752	protein_coding	Gnl3l	utr3	ENSMUSG00000025266	ProperStrand	52	chr9	120039569	120039622	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.5815
chr5	24214673	24214830	protein_coding	Nub1	exon	ENSMUSG00000028954	ProperStrand	32	chr3	123210854	123210891	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.1535
chr5	122304435	122304453	protein_coding	Fam109a	utr3	ENSMUSG00000044134	ProperStrand	12	chr16	23110456	23110511	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.4970
chr6	125127405	125127453	protein_coding	Ncapd2	exon	ENSMUSG00000038252	ProperStrand	170	chr11	69483136	69483191	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-1.8169
chr9	22044541	22044641	protein_coding	Zfp809	intron	ENSMUSG00000057982	ProperStrand	10	chr11	62416612	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-8.7767
chr19	5801205	5801265	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr3	95578265	95580493	protein_coding	Rprd2	exon	ENSMUSG00000028106	ProperStrand	12	1	-10.8161
chr10	79517519	79517732	protein_coding	Gpx4	exon	ENSMUSG00000075706	ProperStrand	55	chr10	110918580	110918660	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-3.6092
chr7	97113354	97116246	protein_coding	Eed	exon	ENSMUSG00000030619	ProperStrand	13	chr15	79913288	79913354	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-6.5816
chr13	7973274	7973291	LINE	Lx	L1	chr13Lx7973131	ProperStrand	1	chr4	131865930	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr9	106099666	106099756	protein_coding	Ppm1m	intron	ENSMUSG00000020253	ProperStrand	2	chr4	131865395	131865475	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-11.3495
chr15	72926658	72926748	antisense	Eif2c2	.	ENSMUSG00000093631	ProperStrand	28	chr2	91103074	91103269	protein_coding	Pacsin3	exon	ENSMUSG00000027257	ProperStrand	5	2	-20.5479
chr4	140723745	140723761	protein_coding	Fbxo42	exon	ENSMUSG00000028920	ProperStrand	91	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.1658
chr17	8653055	8653072	LTR	RLTR11B	ERVK	chr17RLTR11B8652838	ProperStrand	1	chr4	118954794	118954815	protein_coding	Ybx1	exon	ENSMUSG00000028639	ProperStrand	171	1	-inf
chr6	149498891	149498907	protein_coding	Bicd1	exon	ENSMUSG00000003452	NonProperStrand	6	chr4	131865392	131865460	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-8.6503
chr9	30235085	30235102	protein_coding	Snx19	exon	ENSMUSG00000031993	ProperStrand	353	chr1	88247800	88247875	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-1.9029
chr3	156224612	156224628	lincRNA	4930570G19Rik	exon	ENSMUSG00000085084	ProperStrand	326	chr14	76247711	76247792	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-2.4758
chr15	62022396	62022442	lincRNA	Pvt1	intron	ENSMUSG00000072566	ProperStrand	51	chr4	137063717	137063803	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	1	-8.4300
chr5	24010571	24010598	protein_coding	Gbx1	exon	ENSMUSG00000067724	ProperStrand	15	chr19	59375591	59375679	protein_coding	Pdzd8	exon	ENSMUSG00000074746	ProperStrand	42	4	-inf
chr3	22590283	22590373	LINE	L1Md_F2	L1	chr3L1Md_F222588803	NonProperStrand	1	chr3	22576754	22576834	SINE	B3	B2	chr3B322576750	NonProperStrand	1	1	-inf
chr9	21071237	21071253	protein_coding	Atg4d	exon	ENSMUSG00000002820	ProperStrand	9	chr5	125090383	125090489	protein_coding	Atp6v0a2	intron	ENSMUSG00000038023	ProperStrand	31	4	-18.7636
chr10	62210141	62210192	protein_coding	Ccar1	exon	ENSMUSG00000020074	ProperStrand	13	chr7	116664820	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-12.9541
chr7	54110527	54110570	protein_coding	Ldha	utr3	ENSMUSG00000063229	ProperStrand	280	chr11	69481335	69481433	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	4	-4.0370
chr15	79797750	79797768	protein_coding	Cbx7	intron	ENSMUSG00000053411	ProperStrand	62	chr2	158185603	158185652	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-6.4211
chr6	124884661	124884711	protein_coding	Mlf2	exon	ENSMUSG00000030120	ProperStrand	80	chr15	79908960	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-4.9140
mmu-miR-6238	1	18	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr13	8766402	8766463	protein_coding	Adarb2	utr3	ENSMUSG00000052551	NonProperStrand	61	1	-10.5003
chr13	100197233	100197323	protein_coding	Mtap1b	exon	ENSMUSG00000052727	ProperStrand	76	chr3	123210877	123210957	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.6934
chr14	49700751	49700768	protein_coding	Mudeng	exon	ENSMUSG00000036291	NonProperStrand	1	chr14	33005039	33005089	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-inf
chr3	113827103	113827119	protein_coding	Col11a1	utr3	ENSMUSG00000027966	NonProperStrand	139	chr7	52171774	52184656	protein_coding	Ap2a1	exon	ENSMUSG00000060279	ProperStrand	193	1	-9.2851
chr17	24607375	24607393	Simple_repeat	(CGG)n	Simple_repeat	chr17(CGG)n24607354	ProperStrand	8	chr15	79913292	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-7.5918
chr19	59534008	59534026	protein_coding	Emx2	exon	ENSMUSG00000043969	NonProperStrand	87	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-5.1175
chr19	5286266	5286356	protein_coding	Sf3b2	exon	ENSMUSG00000024853	ProperStrand	102	chr14	33005048	33005128	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-3.0198
chr7	29366692	29366772	protein_coding	Pak4	intron	ENSMUSG00000030602	NonProperStrand	4	chr8	124692855	124692945	protein_coding	Gm20388	intron	ENSMUSG00000092329	NonProperStrand	203	1	-16.5836
chr1	145626089	145626192	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	2	-3.2722
chr9	14849455	14849545	protein_coding	Panx1	utr5	ENSMUSG00000031934	ProperStrand	5	chr2	32818817	32818897	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-10.5887
chr1	89107213	89107230	protein_coding	Chrng	exon	ENSMUSG00000026253	ProperStrand	6	chr11	62416601	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-9.8702
chr17	45574523	45574592	lincRNA	B230354K17Rik	intron	ENSMUSG00000073393	ProperStrand	11	chr7	117189933	117190023	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-10.8572
chr13	51777440	51777819	protein_coding	Secisbp2	exon	ENSMUSG00000035139	ProperStrand	19	chr16	23110909	23110991	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	7	-14.7068
chr13	44998360	44998460	protein_coding	Jarid2	exon	ENSMUSG00000038518	ProperStrand	372	chr11	98878371	98878445	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-2.8351
chr16	56039039	56039056	LTR	MuRRS-int	ERV1	chr16MuRRS-int56039037	NonProperStrand	1	chr17	75045959	75045976	protein_coding	Birc6	exon	ENSMUSG00000024073	NonProperStrand	36	1	-inf
chr1	55069110	55073233	protein_coding	Sf3b1	exon	ENSMUSG00000025982	ProperStrand	158	chr11	97642952	97643003	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.0119
chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	chr11	106362619	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-3.5081
chr5	74489202	74489327	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr2	32818841	32818941	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	10	-4.9344
chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	chr7	17022738	17022786	protein_coding	Zc3h4	utr3	ENSMUSG00000059273	ProperStrand	95	1	-8.9521
chr5	33994614	33994632	protein_coding	Slbp	exon	ENSMUSG00000004642	ProperStrand	2	chr11	33102625	33102643	protein_coding	Tlx3	exon	ENSMUSG00000040610	ProperStrand	1	1	-inf
chr8	26824953	26824970	protein_coding	Whsc1l1	utr3	ENSMUSG00000054823	ProperStrand	36	chr17	13112450	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-5.5727
chr15	12279321	12279366	protein_coding	Golph3	exon	ENSMUSG00000022200	ProperStrand	35	chr16	23110958	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.7567
chr6	97141215	97141582	protein_coding	Uba3	exon	ENSMUSG00000030061	ProperStrand	37	chr3	108357264	108357344	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-5.4783
chr7	52958453	52958469	protein_coding	Car11	exon	ENSMUSG00000003273	NonProperStrand	250	chr2	144087382	144087447	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-3.7932
chr15	77793616	77793706	protein_coding	Eif3d	exon	ENSMUSG00000016554	ProperStrand	69	chr18	33954840	33954920	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	5	-14.0772
chr4	144529306	144529386	LTR	ORR1B2	MaLR	chr4ORR1B2144529307	NonProperStrand	1	chr4	144529179	144529269	SINE	B4A	B4	chr4B4A144529103	NonProperStrand	1	1	-inf
chr15	10965488	10965504	protein_coding	Rxfp3	utr3	ENSMUSG00000060735	ProperStrand	37	chr11	6428108	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.0895
chr2	57221443	57221500	protein_coding	Gpd2	utr3	ENSMUSG00000026827	ProperStrand	93	chr7	148634737	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-3.1781
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr17	47604805	47604821	protein_coding	AI661453	exon	ENSMUSG00000034382	NonProperStrand	38	1	-9.5117
chr5	34198375	34203738	protein_coding	Whsc1	exon	ENSMUSG00000057406	ProperStrand	409	chr9	15119631	15119714	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	5	-2.4846
chr8	109190094	109190182	protein_coding	Cdh1	exon	ENSMUSG00000000303	ProperStrand	283	chr17	24856620	24856653	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	3	-8.5724
chr12	32013718	32013765	protein_coding	Lamb1	intron	ENSMUSG00000002900	NonProperStrand	45	chr2	18006072	18006173	protein_coding	Mllt10	intron	ENSMUSG00000026743	ProperStrand	30	17	-inf
chr11	83254019	83254035	protein_coding	1700020L24Rik	exon	ENSMUSG00000035085	NonProperStrand	88	chr8	129468745	129468799	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-3.6930
chr5	130163357	130163374	protein_coding	Zfp11	exon	ENSMUSG00000051034	ProperStrand	3	chr7	116663715	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-14.5479
chr6	124951870	124951914	protein_coding	C530028O21Rik	intron	ENSMUSG00000030329	ProperStrand	12	chr1	87983916	87983998	snoRNA	ENSMUSG00000077274_SNORA26	.	ENSMUSG00000077274	ProperStrand	361	2	-21.0606
chr13	114113333	114113350	protein_coding	BC067074	exon	ENSMUSG00000021763	NonProperStrand	62	chr10	126416028	126416077	protein_coding	Ctdsp2	utr5	ENSMUSG00000078429	ProperStrand	74	1	-12.8276
chr18	12845494	12845510	protein_coding	Ttc39c	exon	ENSMUSG00000024424	ProperStrand	10	chr11	6428099	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-6.6888
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr3	65184572	65184601	protein_coding	Ssr3	utr3	ENSMUSG00000027828	ProperStrand	24	1	-10.7560
chrX	34622906	34622991	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	chr4	116828389	116828453	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	6	-2.3932
chr19	43749124	43749142	protein_coding	Slc25a28	exon	ENSMUSG00000040414	ProperStrand	8	chr18	35716829	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-5.9895
chr14	79756246	79756279	protein_coding	Naa16	exon	ENSMUSG00000022020	ProperStrand	19	chr18	35714144	35714232	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-5.6546
chr2	130104012	130104634	protein_coding	Nop56	exon	ENSMUSG00000027405	ProperStrand	125	chr7	147336316	147336369	protein_coding	Mtg1	utr3	ENSMUSG00000039018	ProperStrand	7	1	-16.2965
chr1	111713367	111713383	LINE	Lx8	L1	chr1Lx8111713333	NonProperStrand	4	chr7	52381737	52381758	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-13.2407
chr4	49127249	49127269	protein_coding	E130309F12Rik	intron	ENSMUSG00000063446	ProperStrand	10	chr4	131908693	131908753	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.3231
chr4	111181632	111181650	protein_coding	Agbl4	intron	ENSMUSG00000061298	ProperStrand	14	chr4	131865855	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.3681
chr2	63936034	63936053	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr13	49779711	49779803	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	2	-3.5130
chr1	195125728	195125745	LINE	L2a	L2	chr1L2a195125465	NonProperStrand	28	chr15	79913287	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-5.0460
chr19	41813685	41813758	protein_coding	Slit1	intron	ENSMUSG00000025020	NonProperStrand	3	chr16	23111777	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-13.4294
chr8	125418802	125418818	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	chr9	15118245	15118321	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	3	-2.3107
chr5	130049618	130049646	protein_coding	Sfswap	intron	ENSMUSG00000029439	ProperStrand	34	chr3	68889026	68889126	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-4.3182
chr19	9947053	9947070	protein_coding	Incenp	utr3	ENSMUSG00000024660	ProperStrand	111	chr12	106269284	106269384	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-3.0082
chr4	128637162	128638634	protein_coding	Adc	exon	ENSMUSG00000028789	ProperStrand	10	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-11.3825
chr11	97641456	97641546	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	chr15	79908937	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-0.8454
chr18	34759747	34759788	protein_coding	Brd8	utr3	ENSMUSG00000003778	ProperStrand	27	chr1	72272906	72272935	snRNA	ENSMUSG00000075752_U2	.	ENSMUSG00000075752	ProperStrand	535	1	-10.5460
chr4	116844399	116844945	protein_coding	Kif2c	exon	ENSMUSG00000028678	ProperStrand	32	chr8	129468849	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	2	-9.2306
chr19	38028956	38030939	protein_coding	Myof	exon	ENSMUSG00000048612	ProperStrand	37	chr7	118219574	118219648	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-5.1004
chr18	41356147	41356185	miRNA	Mir5097	dead	ENSMUSG00000093361	ProperStrand	221	chr3	130432033	130432151	protein_coding	Rpl34	exon	ENSMUSG00000062006	ProperStrand	51	3	-inf
chr4	123064474	123064528	protein_coding	Macf1	exon	ENSMUSG00000028649	ProperStrand	320	chr5	125531369	125531385	protein_coding	Ncor2	exon	ENSMUSG00000029478	ProperStrand	377	1	-6.3034
chr13	74468816	74468887	protein_coding	Sdha	exon	ENSMUSG00000021577	ProperStrand	70	chr6	83111671	83111687	protein_coding	1700003E16Rik	exon	ENSMUSG00000030030	ProperStrand	352	1	-9.4592
chr6	72178971	72178988	protein_coding	Atoh8	intron	ENSMUSG00000037621	NonProperStrand	61	chr17	35960302	35960319	protein_coding	Flot1	utr5	ENSMUSG00000059714	ProperStrand	8	1	-17.2497
chr9	107467772	107467788	lincRNA	Gm9917	intron	ENSMUSG00000053666	ProperStrand	5	chr11	77995188	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	2	-17.9876
chr15	97872135	97872225	protein_coding	Senp1	utr3	ENSMUSG00000033075	ProperStrand	24	chr12	88778642	88778722	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-8.3336
chr16	91227718	91227735	protein_coding	Olig2	utr3	ENSMUSG00000039830	NonProperStrand	78	chr14	55476645	55476661	protein_coding	Homez	exon	ENSMUSG00000057156	NonProperStrand	127	1	-11.2804
chr3	13445577	13445594	LINE	Lx2	L1	chr3Lx213444945	ProperStrand	7	chr3	95980311	95980410	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	5	-22.3296
chr4	129305903	129305984	protein_coding	Txlna	utr3	ENSMUSG00000053841	ProperStrand	37	chr9	120039587	120039677	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-4.2212
chr2	121259366	121259425	protein_coding	Pdia3	exon	ENSMUSG00000027248	ProperStrand	74	chr7	52381719	52381756	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	2	-11.4987
chr9	100605670	100612904	protein_coding	Stag1	exon	ENSMUSG00000037286	ProperStrand	10	chr1	155287326	155287354	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	1	-12.6421
chr7	97337166	97337234	protein_coding	Picalm	intron	ENSMUSG00000039361	ProperStrand	23	chr1	162965981	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-5.4450
chr10	80375107	80375125	protein_coding	Lmnb2	intron	ENSMUSG00000062075	NonProperStrand	7	chr8	129468801	129468876	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-8.7511
chr19	7289818	7289905	protein_coding	Cox8a	utr3	ENSMUSG00000035885	ProperStrand	32	chr7	150717298	150717347	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-6.7499
chr12	25686438	25743961	protein_coding	Kidins220	utr3	ENSMUSG00000036333	ProperStrand	26	chr16	23110899	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-7.5200
chr7	107641888	107641905	protein_coding	Ucp2	utr5	ENSMUSG00000033685	NonProperStrand	2	chr8	32260358	32260422	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-12.0137
chr11	74473918	74474182	protein_coding	1300001I01Rik	exon	ENSMUSG00000020741	ProperStrand	76	chr7	116664842	116664872	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.1512
chr15	79191628	79191675	protein_coding	Tmem184b	utr3	ENSMUSG00000009035	ProperStrand	37	chr16	23111694	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	7	-18.3744
chr15	31525423	31525497	protein_coding	Cct5	exon	ENSMUSG00000022234	ProperStrand	116	chr5	75473198	75473215	protein_coding	Gsx2	utr3	ENSMUSG00000035946	ProperStrand	307	1	-8.7210
chr14	99486698	99486982	protein_coding	Dis3	exon	ENSMUSG00000033166	ProperStrand	17	chr1	162965560	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.6984
chr2	132134476	132134566	protein_coding	Cds2	utr3	ENSMUSG00000058793	ProperStrand	47	chr17	24857763	24857843	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.7154
chr17	26418599	26418617	protein_coding	Luc7l	exon	ENSMUSG00000024188	ProperStrand	15	chr19	59299960	59299976	protein_coding	Kcnk18	exon	ENSMUSG00000040901	ProperStrand	12	1	-19.6590
chr11	23326650	23389210	protein_coding	Usp34	exon	ENSMUSG00000056342	ProperStrand	68	chr16	23110968	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-1.1862
chr2	152209659	152209739	LTR	ORR1A4-int	MaLR	chr2ORR1A4-int152207907	NonProperStrand	1	chr2	152209971	152210061	LTR	ORR1A4	MaLR	chr2ORR1A4152209834	NonProperStrand	1	1	-inf
chr3	144585926	144585942	protein_coding	AI747448	exon	ENSMUSG00000074195	ProperStrand	3	chr17	13112528	13112574	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	2	-17.7635
chr2	154931559	154931579	SINE	ID_B1	B4	chr2ID_B1154931545	ProperStrand	1	chr8	107829063	107829116	protein_coding	E2f4	utr3	ENSMUSG00000014859	ProperStrand	32	1	-inf
chr19	8799617	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	chr13	90238585	90238665	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	2	-4.2114
chr2	120359604	120359625	protein_coding	Zfp106	exon	ENSMUSG00000027288	ProperStrand	199	chr9	120039539	120039678	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.3452
chr4	128261697	128261774	protein_coding	Zscan20	utr3	ENSMUSG00000061894	ProperStrand	6	chr14	76372336	76372426	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	1	-13.7499
chr5	89027893	89027948	protein_coding	Rufy3	intron	ENSMUSG00000029291	ProperStrand	10	chr5	31179670	31179760	protein_coding	Tmem214	utr3	ENSMUSG00000038828	ProperStrand	9	1	-19.9862
chr1	95422942	95422961	protein_coding	Farp2	intron	ENSMUSG00000034066	NonProperStrand	8	chr4	131866154	131866203	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-7.6704
chr17	23958306	23958406	protein_coding	Srrm2	utr3	ENSMUSG00000039218	ProperStrand	521	chr13	23492662	23492698	tRNA	tRNA966-AlaAGC	.	908302	ProperStrand	20	1	-11.2112
chr8	98270009	98270089	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	chr13	90238633	90238723	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	1	-1.4068
chr11	62416575	62416597	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr9	120039630	120039680	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-0.7239
chr8	106771425	106771456	protein_coding	Tk2	intron	ENSMUSG00000035824	ProperStrand	3	chr16	23110829	23110873	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr1	182682188	182682266	protein_coding	Acbd3	intron	ENSMUSG00000026499	ProperStrand	67	chr19	5651213	5651233	protein_coding	Sipa1	utr3	ENSMUSG00000056917	ProperStrand	14	6	-inf
chr3	88384918	88384967	protein_coding	Ssr2	exon	ENSMUSG00000041355	ProperStrand	22	chr8	32260358	32260422	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-6.6044
chr7	88529496	88529520	protein_coding	Cpeb1	intron	ENSMUSG00000025586	NonProperStrand	29	chr9	15130705	15130795	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	3	-20.2147
chr11	116535914	116535982	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr4	119299077	119299177	protein_coding	Foxj3	utr3	ENSMUSG00000032998	ProperStrand	9	1	-9.7629
chr4	107596083	107596100	protein_coding	Cpt2	utr5	ENSMUSG00000028607	NonProperStrand	106	chr11	97643007	97643060	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.5596
chr4	34030856	34030872	protein_coding	Cnr1	exon	ENSMUSG00000044288	ProperStrand	8	chr17	24856652	24856673	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-10.5400
chr7	52577740	52582010	protein_coding	Trpm4	exon	ENSMUSG00000038260	ProperStrand	161	chr7	116664817	116664897	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-2.0532
chr2	71175642	71175658	protein_coding	Slc25a12	intron	ENSMUSG00000027010	NonProperStrand	7	chr12	17553062	17553090	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-9.4553
chr7	26170299	26170315	protein_coding	4732471J01Rik	exon	ENSMUSG00000053714	ProperStrand	1	chr9	120038552	120038587	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-inf
chr11	88698344	88698444	protein_coding	Akap1	exon	ENSMUSG00000018428	ProperStrand	45	chr1	162965562	162965596	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-6.4399
chr4	6055817	6055838	LINE	L1M2	L1	chr4L1M26055768	ProperStrand	1	chr16	23111371	23111447	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-inf
chr15	27586725	27586741	protein_coding	Fam105a	exon	ENSMUSG00000056069	ProperStrand	29	chr7	91032040	91032168	protein_coding	Mesdc1	utr5	ENSMUSG00000070462	ProperStrand	19	2	-inf
chr3	26999763	26999812	protein_coding	Ect2	exon	ENSMUSG00000027699	ProperStrand	17	chr2	93676188	93676204	protein_coding	Accs	exon	ENSMUSG00000040272	ProperStrand	1	1	-inf
chr3	96132424	96132514	snRNA	ENSMUSG00000075978_U1	.	ENSMUSG00000075978	ProperStrand	132	chr4	131865381	131865462	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-2.5765
chr17	39979941	39980025	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr2	61892317	61892334	protein_coding	Slc4a10	intron	ENSMUSG00000026904	ProperStrand	40	1	-8.0340
chr2	73434618	73434634	antisense	Gm13704	.	ENSMUSG00000086544	NonProperStrand	53	chr15	79908958	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	2	-9.3335
chr8	91552355	91552404	protein_coding	Sall1	exon	ENSMUSG00000031665	ProperStrand	96	chr5	130300460	130300556	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.7427
chr17	63409072	63409089	protein_coding	Fbxl17	utr3	ENSMUSG00000023965	NonProperStrand	9	chr16	23111388	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.5836
chr7	26472435	26472451	protein_coding	Tgfb1	utr5	ENSMUSG00000002603	NonProperStrand	154	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-8.8744
chr6	24684480	24684497	protein_coding	Hyal6	exon	ENSMUSG00000029679	NonProperStrand	114	chr9	44523834	44523943	protein_coding	Phldb1	exon	ENSMUSG00000048537	ProperStrand	17	5	-22.1579
chr7	117189866	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	chr4	132394299	132394449	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	4	-2.3708
chr5	125342445	125342545	protein_coding	Ccdc92	utr5	ENSMUSG00000037979	ProperStrand	45	chr9	15119734	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	7	-19.6584
chr11	15212155	15212171	LINE	Lx	L1	chr11Lx15211662	ProperStrand	54	chr7	116664791	116664870	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.7317
chr6	47731647	47731707	misc_RNA	Y_RNA	.	ENSMUSG00000064945	ProperStrand	93	chr5	74489622	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	10	-20.5075
chr15	36528029	36528763	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr3	138106108	138108259	protein_coding	Adh5	utr5	ENSMUSG00000028138	ProperStrand	16	1	-10.5604
chr2	130101975	130102057	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	chr8	13876107	13876226	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	2	-0.9572
chr17	84204636	84204652	protein_coding	Mta3	utr3	ENSMUSG00000055817	NonProperStrand	6	chr4	131908300	131908355	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-5.6461
chr5	34090898	34090916	protein_coding	Letm1	exon	ENSMUSG00000005299	ProperStrand	21	chr7	116664811	116664901	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-10.8778
chr10	20080842	20080858	protein_coding	Fam54a	utr3	ENSMUSG00000019992	ProperStrand	232	chr10	126433111	126433211	protein_coding	Ctdsp2	exon	ENSMUSG00000078429	ProperStrand	74	2	-16.0383
chr4	82889824	82889956	protein_coding	Ttc39b	exon	ENSMUSG00000038172	ProperStrand	78	chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	1	-8.9627
chr12	60774072	60774112	snoRNA	ENSMUSG00000077603_SNORA3	.	ENSMUSG00000077603	ProperStrand	185	chr3	68889086	68889186	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	2	-2.6416
chr5	114203668	114203707	protein_coding	Sart3	exon	ENSMUSG00000018974	ProperStrand	50	chr13	32894381	32894399	protein_coding	Wrnip1	exon	ENSMUSG00000021400	ProperStrand	16	1	-16.3845
chr2	130698687	130698767	protein_coding	4930402H24Rik	intron	ENSMUSG00000027309	ProperStrand	16	chr16	15922247	15922337	protein_coding	2310008H04Rik	intron	ENSMUSG00000041974	ProperStrand	30	1	-17.4765
chr4	138867205	138867223	protein_coding	Akr7a5	intron	ENSMUSG00000028743	ProperStrand	22	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-12.4607
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-2.3561
chr5	116886808	116886898	SINE	MIRb	MIR	chr5MIRb116886830	NonProperStrand	2	chr3	99003137	99003159	protein_coding	Wars2	intron	ENSMUSG00000004233	NonProperStrand	48	1	-21.5483
chr5	143874599	143874615	protein_coding	Rnf216	utr5	ENSMUSG00000045078	NonProperStrand	29	chr16	23111451	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.3903
chr14	51427290	51427389	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr11	97565250	97568134	protein_coding	Psmb3	exon	ENSMUSG00000069744	ProperStrand	26	6	-19.9348
chr4	43505657	43505793	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr7	30074410	30074429	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	3	-2.8410
chr13	56353448	56353465	protein_coding	Neurog1	utr5	ENSMUSG00000048904	ProperStrand	105	chr19	30969167	30969185	protein_coding	Prkg1	exon	ENSMUSG00000052920	NonProperStrand	41	1	-12.9584
chr4	43505734	43505824	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr14	22444224	22444265	protein_coding	Myst4	exon	ENSMUSG00000021767	ProperStrand	151	1	-1.5436
chr19	8946513	8946591	protein_coding	Ubxn1	exon	ENSMUSG00000071655	ProperStrand	68	chr17	35088957	35089012	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	2	-9.1863
chr11	69809637	69809659	protein_coding	Phf23	intron	ENSMUSG00000018572	ProperStrand	25	chr3	108357255	108357351	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	3	-14.4378
chr1	78459458	78459488	protein_coding	Farsb	exon	ENSMUSG00000026245	ProperStrand	40	chr4	131908689	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-7.2125
chr6	85297848	85297882	protein_coding	Rab11fip5	exon	ENSMUSG00000051343	ProperStrand	16	chr7	116663658	116663758	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-8.2861
chr1	22682980	22682997	protein_coding	Rims1	intron	ENSMUSG00000041670	ProperStrand	21	chr11	6428100	6428156	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.1873
chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	chr6	87844138	87845700	protein_coding	Copg	exon	ENSMUSG00000030058	ProperStrand	68	1	-9.0188
chr3	138464102	138464130	protein_coding	Tspan5	intron	ENSMUSG00000028152	ProperStrand	19	chr5	130300460	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-7.7517
chr9	71327025	71327042	protein_coding	Polr2m	utr3	ENSMUSG00000032199	ProperStrand	83	chr18	35714154	35714254	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-2.8586
chr2	26278415	26278518	protein_coding	Sec16a	intron	ENSMUSG00000026924	ProperStrand	86	chr7	110114018	110114034	protein_coding	Olfr576	exon	ENSMUSG00000073962	NonProperStrand	79	1	-12.0375
chr4	131908357	131908517	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr14	63287574	63287615	protein_coding	Serpine3	intron	ENSMUSG00000091155	ProperStrand	210	30	-inf
chr1	26891615	26891705	LINE	L1Md_F2	L1	chr1L1Md_F226889056	NonProperStrand	1	chr1	88726686	88726776	protein_coding	Dis3l2	intron	ENSMUSG00000053333	NonProperStrand	7	1	-inf
chr11	105913078	105913140	protein_coding	Dcaf7	exon	ENSMUSG00000049354	ProperStrand	30	chr17	35089182	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-6.8572
chr2	130101972	130102062	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	chr4	132394424	132394462	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	1	-1.6275
chr15	98481769	98481928	protein_coding	Ddx23	exon	ENSMUSG00000003360	ProperStrand	63	chr16	23110533	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.3788
chr11	6428038	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr11	77995186	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	15	-2.1276
chr12	112779227	112779282	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	chr7	88674740	88674814	snoRNA	ENSMUSG00000093107_AC167122.1	.	ENSMUSG00000093107	ProperStrand	110	1	-3.6308
chr18	10052132	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr8	129458344	129458394	protein_coding	Tomm20	utr3	ENSMUSG00000058779	ProperStrand	55	1	-8.9755
chr5	74489216	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr1	40738899	40738915	protein_coding	Slc9a2	exon	ENSMUSG00000026062	ProperStrand	13	1	-8.6980
chr6	60981827	60981847	LTR	RMER5	ERV1	chr6RMER560981643	NonProperStrand	5	mmu-miR-6240	1	23	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	1	-11.0330
chr11	59778161	59778177	protein_coding	Rasd1	exon	ENSMUSG00000049892	NonProperStrand	49	chr2	29927604	29927701	protein_coding	Set	utr3	ENSMUSG00000054766	ProperStrand	167	1	-11.6679
chr14	33153227	33153832	protein_coding	Ogdhl	exon	ENSMUSG00000021913	ProperStrand	182	chr9	64022856	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-5.8298
chr4	136211125	136211152	protein_coding	Ephb2	utr3	ENSMUSG00000028664	ProperStrand	21	chr11	69483136	69483234	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.3745
chr4	131399490	131399506	protein_coding	Mecr	exon	ENSMUSG00000028910	NonProperStrand	109	chr8	73419666	73419756	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.1023
chr5	34234244	34234262	protein_coding	Whsc1	utr5	ENSMUSG00000057406	ProperStrand	409	chr5	121655016	121655098	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-1.5189
chr3	96362037	96362103	protein_coding	Txnip	utr5	ENSMUSG00000038393	ProperStrand	172	chr8	73419657	73419674	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	4	-5.8654
chr9	40609411	40613170	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr8	73419657	73419757	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	6	-1.8540
chr10	126773531	126773587	protein_coding	Gli1	exon	ENSMUSG00000025407	ProperStrand	48	chr15	79913288	79913321	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.0091
chr4	132867673	132867753	protein_coding	Wdtc1	intron	ENSMUSG00000037622	ProperStrand	81	chrX	139271749	139271839	protein_coding	Tmem164	utr3	ENSMUSG00000047045	ProperStrand	13	1	-15.8432
chr15	43114171	43114221	protein_coding	Eif3e	exon	ENSMUSG00000022336	ProperStrand	17	chr16	23110965	23110995	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.8783
chr1	64778980	64779014	protein_coding	Fzd5	utr3	ENSMUSG00000045005	ProperStrand	175	chr5	121655100	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-1.8859
chr9	49465446	49465542	protein_coding	Ncam1	intron	ENSMUSG00000039542	ProperStrand	18	chr2	144087324	144087364	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-8.9682
chr2	90235294	90235327	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	136652368	136652384	protein_coding	Ppp1r12b	utr3	ENSMUSG00000073557	NonProperStrand	12	1	-7.6663
chr11	78409240	78409261	protein_coding	Nlk	intron	ENSMUSG00000017376	NonProperStrand	3	chr3	90017717	90017734	protein_coding	Rab13	utr5	ENSMUSG00000027935	NonProperStrand	18	1	-22.0931
chr1	173433178	173433255	protein_coding	B930036N10Rik	utr3	ENSMUSG00000091993	ProperStrand	150	chr19	8963082	8963172	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-0.9317
chr1	71683923	71685084	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr6	108438588	108439810	protein_coding	Itpr1	exon	ENSMUSG00000030102	NonProperStrand	15	1	-10.6436
chrX	34667269	34667285	protein_coding	Nkap	exon	ENSMUSG00000016409	NonProperStrand	133	chr5	116010836	116010927	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	1	-8.5546
chr2	154690228	154690328	protein_coding	Raly	intron	ENSMUSG00000027593	ProperStrand	116	chr7	116664807	116664868	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.4935
chr6	128386083	128386099	protein_coding	Fkbp4	intron	ENSMUSG00000030357	NonProperStrand	42	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.3470
chr3	49336280	49336300	LINE	L1_Mus2	L1	chr3L1_Mus249336241	ProperStrand	4	chr17	35087941	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-10.8192
chr16	64851346	64851369	Simple_repeat	(CCG)n	Simple_repeat	chr16(CCG)n64851329	NonProperStrand	15	chr11	34135846	34135863	protein_coding	Dock2	intron	ENSMUSG00000020143	NonProperStrand	31	1	-17.3237
chr1	133824665	133824702	protein_coding	Nucks1	exon	ENSMUSG00000026434	ProperStrand	59	chr16	23111450	23111505	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-2.4612
chr8	73115896	73115986	protein_coding	Ell	utr3	ENSMUSG00000070002	ProperStrand	32	chr18	35714200	35714280	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.6297
chr6	124653090	124653144	protein_coding	Lpcat3	exon	ENSMUSG00000004270	ProperStrand	19	chr11	62416952	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	3	-18.8258
chrX	34337760	34337825	protein_coding	Slc25a5	exon	ENSMUSG00000016319	ProperStrand	55	chr10	110918591	110918617	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-6.1303
chr4	53873597	53873644	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	chr4	131865392	131865482	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	2	-1.3768
chr1	75144077	75144115	protein_coding	Fam134a	utr3	ENSMUSG00000049339	ProperStrand	7	chr7	52381722	52381799	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	2	-18.9673
chr16	37384897	37384913	protein_coding	Stxbp5l	utr5	ENSMUSG00000022829	ProperStrand	332	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-8.2627
mmu-miR-2137	0	21	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	chr17	39985219	39985301	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-4.2408
chr12	85500937	85500966	protein_coding	C130039O16Rik	exon	ENSMUSG00000042507	ProperStrand	75	chr18	35716809	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.8113
chr11	58690266	58692321	protein_coding	2810021J22Rik	exon	ENSMUSG00000020491	ProperStrand	162	chr11	116535914	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	17	-19.7680
chr1	167998114	167998132	LTR	ORR1A2-int	MaLR	chr1ORR1A2-int167997409	ProperStrand	4	chr11	77995222	77995254	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	2	-19.3715
chr5	118376503	118376519	protein_coding	Nos1	exon	ENSMUSG00000029361	NonProperStrand	237	chr5	147647180	147647229	protein_coding	Rpl21	exon	ENSMUSG00000041453	ProperStrand	112	1	-9.3070
chr16	94915666	94915756	protein_coding	Dyrk1a	utr3	ENSMUSG00000022897	ProperStrand	17	chr10	23505200	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.3129
chr5	100855902	100855943	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr2	152157784	152157853	protein_coding	Rbck1	utr5	ENSMUSG00000027466	ProperStrand	30	1	-8.0238
chr11	98834798	98834874	protein_coding	Rara	exon	ENSMUSG00000037992	ProperStrand	37	chr8	32260335	32260411	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	10	-19.3273
chr5	147646410	147646464	snoRNA	ENSMUSG00000077185_SNORD102	.	ENSMUSG00000077185	ProperStrand	142	chr2	26494708	26494802	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-3.0761
chr11	50108940	50108982	protein_coding	Canx	utr3	ENSMUSG00000020368	ProperStrand	296	chr17	35299563	35299641	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	2	-3.4759
chr10	62044957	62045020	protein_coding	Ddx21	utr3	ENSMUSG00000020075	ProperStrand	137	chr11	74469998	74470025	protein_coding	1300001I01Rik	exon	ENSMUSG00000020741	ProperStrand	76	3	-inf
chr8	12757419	12757437	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr6	145564547	145564563	protein_coding	Tuba3b	utr5	ENSMUSG00000067338	ProperStrand	152	1	-6.7436
chr19	8949818	8950095	protein_coding	Ubxn1	utr3	ENSMUSG00000071655	ProperStrand	68	chr16	23111722	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	8	-16.2318
chr3	14886765	14887902	protein_coding	Car2	exon	ENSMUSG00000027562	ProperStrand	14	chr4	136210886	136210934	protein_coding	Ephb2	utr3	ENSMUSG00000028664	ProperStrand	21	2	-20.8285
chr16	23111372	23111505	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	chr17	13112450	13112585	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	116	-7.0113
chr15	72638705	72638722	protein_coding	Trappc9	intron	ENSMUSG00000047921	NonProperStrand	53	chr7	50076896	50076996	protein_coding	Gm2381	intron	ENSMUSG00000092225	ProperStrand	9	1	-17.3515
chr1	130283738	130287851	protein_coding	Dars	exon	ENSMUSG00000026356	ProperStrand	28	chr9	15118334	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-4.9141
chr17	34480944	34480961	pseudogene	H2-Ea-ps	.	ENSMUSG00000036322	NonProperStrand	1	chr5	130295414	130295489	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-inf
chr5	73059432	73059448	protein_coding	Nipal1	exon	ENSMUSG00000067219	NonProperStrand	1	chr6	71832629	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-inf
chr2	28368856	28368876	protein_coding	Ralgds	utr5	ENSMUSG00000026821	NonProperStrand	60	chr12	112779226	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-4.7759
chr19	9967771	9967858	protein_coding	Incenp	exon	ENSMUSG00000024660	ProperStrand	111	chr16	23110545	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.4833
chr15	25729922	25730909	protein_coding	Myo10	exon	ENSMUSG00000022272	ProperStrand	168	chr1	162967490	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-1.7190
chrX	72214248	72214264	protein_coding-noncoding	Gab3	utr3	ENSMUSG00000032750	ProperStrand	420	chr7	150717323	150717348	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-1.9632
chr17	66468411	66468427	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	chr15	79908972	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-2.2928
chr4	134900609	134900653	protein_coding-noncoding	Srrm1	utr3	ENSMUSG00000028809	ProperStrand	1	chr12	112779177	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-inf
chr10	79173119	79173434	protein_coding	Bsg	exon	ENSMUSG00000023175	ProperStrand	107	chr16	23110466	23110556	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.5370
chr7	112782969	112782985	protein_coding	Arfip2	utr3	ENSMUSG00000030881	ProperStrand	191	chr4	116827120	116827187	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-4.7746
chr7	52305578	52305658	protein_coding	Prr12	exon	ENSMUSG00000046574	ProperStrand	86	chr5	92485086	92485176	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	1	-8.0194
chr12	13226132	13226222	protein_coding	Ddx1	utr3	ENSMUSG00000037149	ProperStrand	47	chr5	130300445	130300525	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.9365
chr18	77279354	77279399	protein_coding	Katnal2	intron	ENSMUSG00000025420	NonProperStrand	9	chr17	24857807	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	4	-18.2025
chr9	63868722	63868738	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	chr3	127265777	127265877	protein_coding	4930422G04Rik	exon	ENSMUSG00000051278	ProperStrand	10	1	-12.2474
chr13	38042295	38042363	protein_coding	Rreb1	utr3	ENSMUSG00000039087	ProperStrand	33	chr3	123210854	123210870	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.0977
chr4	128885217	128886935	protein_coding	Yars	exon	ENSMUSG00000028811	ProperStrand	131	chr11	77995191	77995236	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-4.6636
chr1	88253928	88253952	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chr8	23534859	23534875	protein_coding	Mrps31	exon	ENSMUSG00000031533	ProperStrand	3	1	-13.7147
chr1	130197573	130197589	protein_coding	Lct	exon	ENSMUSG00000026354	NonProperStrand	9	chr5	108077402	108077419	protein_coding	Rpap2	intron	ENSMUSG00000033773	ProperStrand	12	1	-20.0762
chr11	102925178	102925239	protein_coding	Nmt1	exon	ENSMUSG00000020936	ProperStrand	43	chr16	23111735	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	5	-11.5971
chr5	120135336	120135353	lincRNA	Gm16065	exon	ENSMUSG00000086847	NonProperStrand	1	chr19	8963086	8963186	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-inf
chr8	4254296	4254345	protein_coding	Snapc2	exon	ENSMUSG00000011837	ProperStrand	3	chr15	57807528	57807574	tRNA	tRNA913-MetCAT	.	1472667	ProperStrand	48	1	-19.6041
chr17	56401181	56401281	protein_coding	Fem1a	utr3	ENSMUSG00000043683	ProperStrand	11	chr18	35716834	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-5.3336
chr8	123099128	123099200	protein_coding	Gse1	exon	ENSMUSG00000031822	ProperStrand	97	chr7	116664869	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.7622
chr7	51034365	51034435	protein_coding	Klk11	utr3	ENSMUSG00000067616	ProperStrand	2	chr9	15119649	15119739	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-9.8289
chr8	72846532	72846549	protein_coding	Lass1	exon	ENSMUSG00000087408	NonProperStrand	8	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-11.6954
chr17	24856729	24856759	antisense	Snhg9	.	ENSMUSG00000090101	ProperStrand	218	chr5	74489595	74489677	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-1.5751
chr3	108357254	108357313	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	chr7	67125759	67125830	snoRNA	ENSMUSG00000089375_Snord107	.	ENSMUSG00000089375	ProperStrand	451	1	-1.1258
chr15	89201365	89201565	protein_coding	Ncaph2	exon	ENSMUSG00000008690	ProperStrand	65	chr1	88248582	88248600	snoRNA	ENSMUSG00000064696_SNORD20	.	ENSMUSG00000064696	ProperStrand	89	7	-inf
chr8	121222299	121222316	protein_coding	Cdh13	intron	ENSMUSG00000031841	ProperStrand	60	chr17	39985198	39985243	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-5.9321
chr2	32881629	32881645	protein_coding	Garnl3	exon	ENSMUSG00000038860	NonProperStrand	54	chr4	116828379	116828453	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-8.5935
chr2	170515809	170515909	LTR	RLTR9A	ERVK	chr2RLTR9A170515685	ProperStrand	5	chr7	118219574	118219637	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	5	-inf
chr17	27559700	27559717	protein_coding	Grm4	utr3	ENSMUSG00000063239	ProperStrand	147	chr19	8799835	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-3.2635
chr7	140179646	140179698	protein_coding	Ctbp2	utr3	ENSMUSG00000030970	ProperStrand	89	chr10	39978361	39978451	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-4.6960
chr5	100855902	100855944	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr2	165960501	165960597	protein_coding	Sulf2	intron	ENSMUSG00000006800	ProperStrand	171	1	-4.5964
chr17	19519576	19530627	protein_coding	Vmn2r99	exon	ENSMUSG00000090304	ProperStrand	10	chr2	130102004	130102085	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	2	-14.3684
chr3	127301656	127301731	protein_coding	4930422G04Rik	exon	ENSMUSG00000051278	ProperStrand	10	chr18	63109676	63109692	protein_coding	Apcdd1	exon	ENSMUSG00000071847	NonProperStrand	254	1	-14.0846
chr10	127485084	127485121	protein_coding	Naca	exon	ENSMUSG00000061315	ProperStrand	50	chr4	131865855	131865908	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-5.6670
chr17	25296587	25296603	protein_coding	Clcn7	exon	ENSMUSG00000036636	ProperStrand	94	chr18	6992354	6992834	protein_coding	Mkx	exon	ENSMUSG00000061013	ProperStrand	6	1	-16.9986
chr12	17552962	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr7	51505234	51505308	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	3	-2.6588
chr2	118611946	118611962	protein_coding	Disp2	exon	ENSMUSG00000040035	NonProperStrand	204	chr15	78237232	78237248	protein_coding	Mpst	utr5	ENSMUSG00000071711	ProperStrand	7	1	-15.2966
chr7	116665144	116665219	protein_coding	Rpl27a	exon	ENSMUSG00000046364	ProperStrand	149	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-2.0174
chr13	55105923	55105939	protein_coding	Unc5a	exon	ENSMUSG00000025876	NonProperStrand	96	chr2	32818883	32818933	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-4.5621
chr5	4081761	4081790	protein_coding	Cyp51	utr3	ENSMUSG00000001467	ProperStrand	13	chr5	130295417	130295470	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	2	-13.3443
chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	chr18	75161108	75161173	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	1	-5.1596
chr2	31374294	31375914	protein_coding	Ass1	exon	ENSMUSG00000076441	ProperStrand	29	chr17	24857716	24857806	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.5901
chr10	23506672	23506837	protein_coding	Rps12	utr5	ENSMUSG00000061983	ProperStrand	309	chr17	35299566	35299600	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	2	-3.3680
chr5	37338389	37338405	protein_coding	Ppp2r2c	exon	ENSMUSG00000029120	ProperStrand	19	chr2	26494762	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.2936
chr6	120856056	120856166	protein_coding	Bid	intron	ENSMUSG00000004446	ProperStrand	6	chr5	115939535	115939555	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-12.6166
chr11	55296260	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	chr13	49779668	49779758	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-0.7738
chr7	112782969	112782985	protein_coding	Arfip2	utr3	ENSMUSG00000030881	ProperStrand	191	chr19	8799021	8799051	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-3.6188
chr13	109650394	109822670	protein_coding	Pde4d	exon	ENSMUSG00000021699	NonProperStrand	36	chr9	120038467	120038551	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.9810
chr9	103705466	103705556	LINE	L1Md_A	L1	chr9L1Md_A103704548	ProperStrand	1	chr9	19462431	19462511	LINE	L1Md_A	L1	chr9L1Md_A19461964	ProperStrand	81	1	-inf
chr17	29849969	29850059	protein_coding-noncoding	1110021J02Rik	utr3	ENSMUSG00000024018	ProperStrand	1	chr17	29850040	29850120	protein_coding	1110021J02Rik	intron	ENSMUSG00000024018	ProperStrand	7	1	-inf
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr7	17040701	17040717	protein_coding	Tmem160	exon	ENSMUSG00000019158	ProperStrand	55	1	-6.0749
chr8	74979414	74979459	protein_coding	1700030K09Rik	exon	ENSMUSG00000052794	ProperStrand	6	chr18	33954817	33954907	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-8.1162
chr19	34392966	34392986	protein_coding	Fas	intron	ENSMUSG00000024778	ProperStrand	11	chr7	52382754	52382832	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-10.1964
chr14	76372292	76372392	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	chr1	162965980	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	14	-18.4257
chr9	44688281	44688298	protein_coding	Mll1	intron	ENSMUSG00000002028	NonProperStrand	26	chr11	68887035	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-5.7674
chr11	117716776	117716827	protein_coding	Birc5	utr3	ENSMUSG00000017716	ProperStrand	16	chr2	26494780	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-9.2847
chr14	56163323	56163730	protein_coding	Pck2	exon	ENSMUSG00000040618	ProperStrand	18	chr4	131865948	131865987	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-9.6730
chr4	56910494	56910629	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	chr3	123210853	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	60	-20.5463
chr15	31525430	31525530	protein_coding	Cct5	exon	ENSMUSG00000022234	ProperStrand	116	chr13	65259664	65259716	snoRNA	ENSMUSG00000089161_SNORA48	.	ENSMUSG00000089161	ProperStrand	28	1	-13.5310
chrX	110155702	110155739	protein_coding	Chm	utr3	ENSMUSG00000025531	ProperStrand	9	chr2	152119846	152119862	protein_coding	Tbc1d20	intron	ENSMUSG00000027465	ProperStrand	27	2	-19.2734
chr4	131908230	131908475	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr11	106362588	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	6	-11.3210
chrX	69467519	69467536	protein_coding	Magea4	exon	ENSMUSG00000033343	NonProperStrand	8	chr9	15118322	15118354	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-7.4559
chr2	153050783	153050799	protein_coding	Tspyl3	exon	ENSMUSG00000074671	ProperStrand	228	chr15	79908958	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-2.9647
chr17	28725694	28725774	protein_coding	Srpk1	utr3	ENSMUSG00000004865	ProperStrand	61	chr14	76372287	76372377	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	1	-8.9575
chr2	29759541	29759579	protein_coding	Odf2	exon	ENSMUSG00000026790	ProperStrand	58	chr15	79908962	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	6	-22.2148
chr11	121303847	121303863	protein_coding	Fn3k	utr3	ENSMUSG00000025175	ProperStrand	1	chr4	131908810	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-inf
chr4	118809563	118809592	protein_coding	Slc2a1	utr3	ENSMUSG00000028645	ProperStrand	361	chr4	129192185	129192279	protein_coding	Marcksl1	exon	ENSMUSG00000047945	ProperStrand	52	1	-10.0061
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr1	88247738	88247824	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	7	-7.2170
chr15	103029551	103029582	protein_coding	Cbx5	utr3	ENSMUSG00000009575	ProperStrand	98	chr2	158182156	158182213	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-4.0654
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr12	110271945	110271962	protein_coding	Begain	exon	ENSMUSG00000040867	NonProperStrand	9	1	-12.4764
chr2	26246664	26246726	protein_coding	Pmpca	intron	ENSMUSG00000026926	ProperStrand	45	chr2	26494710	26494800	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.6333
chr16	14461263	14461280	protein_coding	Abcc1	utr5	ENSMUSG00000023088	ProperStrand	35	chr4	131865855	131865915	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.6607
chr3	107559585	107559601	protein_coding	Csf1	exon	ENSMUSG00000014599	ProperStrand	5	chr16	23110911	23111005	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr1	36318117	36318207	LINE	L1MA6	L1	chr1L1MA636317979	ProperStrand	1	chr1	36318260	36318350	LINE	L1MA6	L1	chr1L1MA636318225	ProperStrand	1	1	-inf
chr17	89392145	89392235	protein_coding	Fshr	intron	ENSMUSG00000032937	ProperStrand	3	chr17	35521394	35521474	protein_coding	H2-Q4	utr3	ENSMUSG00000035929	NonProperStrand	10	1	-inf
chr8	108201137	108201205	protein_coding	Ctcf	exon	ENSMUSG00000005698	ProperStrand	75	chr4	131908702	131908792	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.9361
chr17	35088971	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	chr13	21351673	21351710	tRNA	tRNA71-AlaAGC	.	713224	ProperStrand	13	1	-8.9493
chr8	125626567	125626657	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	chr2	166890503	166890583	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-4.9109
chr17	28537389	28537405	protein_coding	Fkbp5	utr3	ENSMUSG00000024222	NonProperStrand	6	chr11	6428060	6428088	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-7.7732
chr19	4619999	4620161	protein_coding	Pcx	exon	ENSMUSG00000024892	ProperStrand	70	chr4	116826700	116826766	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	2	-10.4745
chr7	17147079	17147104	protein_coding	Grlf1	exon	ENSMUSG00000058230	ProperStrand	38	chr19	8800384	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-7.3344
chr14	25064525	25064542	protein_coding	Dlg5	exon	ENSMUSG00000021782	ProperStrand	46	chr16	23110470	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.9251
chr7	52382752	52382811	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	chr16	18240811	18240911	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	2	-4.8341
chr1	138178661	138178677	protein_coding	Camsap2	exon	ENSMUSG00000041570	NonProperStrand	116	chr2	26494773	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.9809
chr11	96635806	96638294	protein_coding	Snx11	utr5	ENSMUSG00000020876	NonProperStrand	24	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.0142
chr18	75161562	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	chr9	64023228	64023288	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	1	-2.5878
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	27892625	27892644	protein_coding	Ptprk	intron	ENSMUSG00000019889	NonProperStrand	24	1	-6.2570
chr2	144087360	144087452	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	chr12	106269284	106269557	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	6	-1.0637
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-3.2078
chr15	79554966	79555024	protein_coding	Sun2	utr3	ENSMUSG00000042524	ProperStrand	13	chrX	34622906	34622957	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	4	-19.0707
chr2	130103448	130103502	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	chr17	35089182	35089233	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-0.9774
chr2	154360979	154361069	protein_coding	Cbfa2t2	utr3	ENSMUSG00000038533	ProperStrand	99	chrX	34622940	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-2.2985
chr11	69717655	69717924	protein_coding	Neurl4	exon	ENSMUSG00000047284	ProperStrand	28	chr5	130300507	130300545	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.8897
chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	chr11	62416951	62417019	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-2.3984
chr11	69870769	69870785	protein_coding	Asgr1	exon	ENSMUSG00000020884	NonProperStrand	145	chr5	108336363	108336423	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-3.2264
chr11	57297473	57297525	protein_coding	Fam114a2	utr3	ENSMUSG00000020523	ProperStrand	25	chr15	101754849	101754865	protein_coding	Krt4	exon	ENSMUSG00000059668	ProperStrand	45	1	-15.6518
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr1	90123798	90124639	protein_coding	Heatr7b1	utr5	ENSMUSG00000079429	ProperStrand	147	1	-6.0211
chr1	77503571	77503661	protein_coding	Epha4	exon	ENSMUSG00000026235	ProperStrand	57	chr18	35716685	35716765	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.2546
chr5	147831696	147835972	protein_coding	Lnx2	exon	ENSMUSG00000016520	ProperStrand	4	chr11	94529110	94529394	protein_coding	Xylt2	exon	ENSMUSG00000020868	ProperStrand	65	2	-inf
chr17	35299565	35299642	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	chr14	76372328	76372418	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	1	-1.1025
chr2	42398548	42398564	protein_coding	Lrp1b	intron	ENSMUSG00000049252	NonProperStrand	39	chr2	32818840	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-6.3193
chr2	164590661	164593215	protein_coding	Dnttip1	exon	ENSMUSG00000017299	ProperStrand	3	chr11	69483187	69483277	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-14.4332
chr7	118222048	118222822	protein_coding	Eif4g2	exon	ENSMUSG00000005610	ProperStrand	134	chr11	6428077	6428157	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-3.3370
chr7	20365102	20366168	protein_coding	Cblc	utr3	ENSMUSG00000040525	ProperStrand	3	chr17	24857722	24857802	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-8.3442
chr13	116296104	116296194	LTR	RMER6C	ERVK	chr13RMER6C116295851	ProperStrand	1	chr13	116296402	116296482	LTR	RMER6C	ERVK	chr13RMER6C116296315	ProperStrand	1	1	-inf
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr5	108334194	108334306	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	3	-0.9697
chr12	111891595	111891629	protein_coding	Dync1h1	intron	ENSMUSG00000018707	ProperStrand	648	chr5	120935628	120935699	protein_coding	Plbd2	utr3	ENSMUSG00000029598	ProperStrand	22	5	-20.5360
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr11	5180669	5180685	protein_coding	Znrf3	utr3	ENSMUSG00000041961	NonProperStrand	210	1	-8.8609
chr16	20657555	20662802	protein_coding	Psmd2	exon	ENSMUSG00000006998	ProperStrand	99	chr9	15119631	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	4	-7.0590
chr12	110892838	110892903	snoRNA	ENSMUSG00000064621_AF357355	.	ENSMUSG00000064621	ProperStrand	60	chr2	26494748	26494838	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.1070
chr11	51087019	51087059	protein_coding	Clk4	utr5	ENSMUSG00000020385	ProperStrand	4	chr18	66143866	66147442	protein_coding	Lman1	exon	ENSMUSG00000041891	ProperStrand	36	1	-19.2632
chr11	69037669	69037685	protein_coding	Gucy2e	exon	ENSMUSG00000020890	NonProperStrand	99	chr12	55755139	55755157	protein_coding	1110002B05Rik	intron	ENSMUSG00000044408	ProperStrand	4	1	-18.0334
chr8	108623029	108624850	protein_coding	Nfatc3	exon	ENSMUSG00000031902	ProperStrand	75	chr11	62416579	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	3	-11.2427
chr15	81110991	81111009	SINE	ID4	ID	chr15ID481110956	ProperStrand	272	chr11	106852065	106852122	protein_coding	Kpna2	exon	ENSMUSG00000018362	ProperStrand	70	1	-9.9738
chr19	57731794	57731884	protein_coding	Atrnl1	intron	ENSMUSG00000054843	ProperStrand	22	chr17	24857747	24857827	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.1130
chr2	90235297	90235337	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	121276634	121276734	protein_coding	Serf2	utr3	ENSMUSG00000074884	ProperStrand	22	2	-10.4561
chr16	84977574	84977590	protein_coding	App	intron	ENSMUSG00000022892	NonProperStrand	101	chr7	29136525	29136586	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.5377
chr10	6342811	6342828	protein_coding	Mthfd1l	intron	ENSMUSG00000040675	NonProperStrand	14	chr4	122970459	122970528	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	3	-inf
chr7	13516168	13516205	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr1	162966189	162966246	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	2	-5.3444
chr3	136425113	136425130	protein_coding	Ppp3ca	intron	ENSMUSG00000028161	ProperStrand	45	chr16	23111772	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.3757
chr18	10052128	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr7	116663658	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	12	-7.1921
chr10	62048306	62048328	protein_coding	Ddx21	exon	ENSMUSG00000020075	ProperStrand	137	chr11	6519836	6519926	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-6.3049
chr3	87905196	87905238	protein_coding	Iqgap3	intron	ENSMUSG00000028068	ProperStrand	16	chr1	162968461	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-8.7363
chrX	7484585	7484601	protein_coding	Timm17b	utr3	ENSMUSG00000031158	ProperStrand	36	chr7	116664806	116664868	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.4622
chr7	151765212	151765228	antisense	Gm10574	.	ENSMUSG00000073778	ProperStrand	357	chr3	108357355	108357391	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	2	-2.7156
chr1	84748246	84748500	protein_coding	Trip12	intron	ENSMUSG00000026219	ProperStrand	248	chr11	62418015	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-2.8931
mmu-miR-6238	1	22	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr16	23110879	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	12	-1.6567
chr19	57685453	57685475	Low_complexity	GC_rich	Low_complexity	chr19GC_rich57685453	ProperStrand	13	chr19	8963027	8963085	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.1201
chr3	89827479	89827529	protein_coding	Ubap2l	exon	ENSMUSG00000042520	ProperStrand	88	chr12	77153153	77153244	protein_coding	Syne2	exon	ENSMUSG00000063450	ProperStrand	63	2	-19.1003
chr4	131908418	131908463	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr13	55589253	55589269	protein_coding	Dbn1	exon	ENSMUSG00000034675	ProperStrand	43	1	-7.9252
chr13	97955555	97955609	protein_coding	Hexb	exon	ENSMUSG00000021665	ProperStrand	22	chr19	8800369	8800459	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-5.4555
chr15	76175313	76175383	protein_coding	Cyc1	exon	ENSMUSG00000022551	ProperStrand	47	chr7	117189957	117190049	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	14	-inf
chr13	9833564	9833653	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr11	58115972	58116007	tRNA	tRNA1911-LeuCAA	.	18013	ProperStrand	165	2	-5.2727
chr11	100181428	100181985	protein_coding	Eif1	utr5	ENSMUSG00000035530	ProperStrand	115	chr15	34370587	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-2.3957
chr13	9833560	9833659	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chrX	103395943	103396005	protein_coding	Pgk1	intron	ENSMUSG00000062070	ProperStrand	484	1	-1.3231
chr10	79174523	79174574	protein_coding	Bsg	utr3	ENSMUSG00000023175	ProperStrand	107	chr7	148634705	148634795	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-2.9277
chr11	50140636	50140717	LTR	RLTR42-int	ERVK	chr11RLTR42-int50140651	NonProperStrand	1	chr4	131908710	131908783	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-inf
chr12	92876486	92876532	Simple_repeat	(CA)n	Simple_repeat	chr12(CA)n92876488	NonProperStrand	1	chr5	130300460	130300550	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-inf
chr15	97214880	97214925	protein_coding	Fam113b	exon	ENSMUSG00000044250	ProperStrand	10	chr18	35716762	35716852	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-5.5279
chr5	71143282	71143298	protein_coding	Gabrg1	utr3	ENSMUSG00000001260	ProperStrand	1	chr2	179911675	179911813	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	1	-inf
chr9	39358287	39358304	protein_coding	Olfr958	exon	ENSMUSG00000050853	NonProperStrand	266	chr5	121655015	121655126	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-1.2675
chr6	124867832	124867878	protein_coding	Ptms	utr5	ENSMUSG00000030122	ProperStrand	21	chr18	82773672	82773688	protein_coding	Zfp236	exon	ENSMUSG00000041258	NonProperStrand	117	1	-14.0986
chr18	35333963	35403726	protein_coding	Ctnna1	exon	ENSMUSG00000037815	ProperStrand	115	chr4	131908236	131908396	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	9	-11.1158
chr17	50821783	50821866	protein_coding	Plcl2	intron	ENSMUSG00000038910	ProperStrand	10	chr5	74489598	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-7.3223
chr1	93263063	93263079	protein_coding	Fam132b	exon	ENSMUSG00000047443	NonProperStrand	98	chr16	23111760	23111817	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-2.2876
chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr7	148634768	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	3	-0.9347
chr6	88843445	88847318	protein_coding	Mcm2	exon	ENSMUSG00000002870	ProperStrand	83	chr8	113366286	113366328	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	4	-20.0503
chr10	43666907	43666924	protein_coding	Rtn4ip1	utr3	ENSMUSG00000019864	NonProperStrand	3	chr16	23110841	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-inf
chr9	64111281	64111371	Other	RMER1B	Other	chr9RMER1B64111057	ProperStrand	1	chr9	64110622	64110712	SINE	RSINE1	B4	chr9RSINE164110554	ProperStrand	1	1	-inf
chrX	148315093	148315193	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	chr2	145076805	145209255	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-3.6105
chr8	113208756	113208772	protein_coding	Vac14	intron	ENSMUSG00000010936	NonProperStrand	23	chrX	135868453	135868501	protein_coding	Trap1a	utr5	ENSMUSG00000051257	ProperStrand	66	1	-15.0523
chr12	12777979	12777996	LTR	LTR33A_	ERVL	chr12LTR33A_12777861	ProperStrand	10	chr4	43505879	43505931	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	1	-6.5547
chr2	26768048	26768119	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	chr17	24857715	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	13	-5.2898
chr5	50370337	50370353	protein_coding	Gpr125	exon	ENSMUSG00000029090	ProperStrand	29	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.9774
chr7	28108261	28109162	protein_coding	Ltbp4	exon	ENSMUSG00000040488	ProperStrand	91	chr19	8799021	8799086	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-5.0208
chr1	54490984	54491074	protein_coding	Gtf3c3	exon	ENSMUSG00000041303	ProperStrand	11	chr16	23111383	23111415	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	7	-20.5805
chr15	12843784	12845132	protein_coding	Drosha	exon	ENSMUSG00000022191	ProperStrand	163	chr11	51551331	51551424	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	5	-19.9350
chr2	37431984	37432001	protein_coding	Strbp	utr3	ENSMUSG00000026915	ProperStrand	90	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-7.7830
chr9	103234274	103234305	protein_coding	Topbp1	intron	ENSMUSG00000032555	ProperStrand	81	chr9	15118328	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-2.9246
chr6	88460026	88460068	protein_coding	Sec61a1	intron	ENSMUSG00000030082	ProperStrand	46	chr4	117809839	117809855	protein_coding	Kdm4a	utr3	ENSMUSG00000033326	ProperStrand	81	1	-13.2472
chr11	13412981	13413061	LTR	MTD-int	MaLR	chr11MTD-int13412931	NonProperStrand	1	chr11	13413173	13413263	LTR	MTD-int	MaLR	chr11MTD-int13413116	NonProperStrand	1	1	-inf
chr3	153575089	153575107	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	chr15	101926775	101926838	protein_coding	Eif4b	utr3	ENSMUSG00000058655	ProperStrand	484	3	-10.5201
chr15	98680805	98680846	protein_coding	Mll2	exon	ENSMUSG00000048154	ProperStrand	170	chr2	32818886	32818946	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-3.4917
mmu-miR-6238	1	20	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr3	123210854	123210904	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-1.4504
chr5	120133608	120133649	protein_coding	Tbx3	utr3	ENSMUSG00000018604	ProperStrand	87	chr9	120037927	120037979	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	2	-6.7179
chr5	34894211	34894227	protein_coding	Sh3bp2	utr5	ENSMUSG00000054520	ProperStrand	43	chr10	23505193	23505234	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.7183
chr11	3077949	3078039	protein_coding	Sfi1	intron	ENSMUSG00000023764	NonProperStrand	20	chr5	84704033	84704123	protein_coding	Epha5	intron	ENSMUSG00000029245	ProperStrand	3	1	-inf
chr17	31722744	31722760	protein_coding	Pknox1	intron	ENSMUSG00000006705	ProperStrand	110	chr8	108233712	108233729	protein_coding	4933405L10Rik	exon	ENSMUSG00000013158	ProperStrand	94	1	-11.1934
chr8	72416310	72416410	SINE	B1_Mur3	Alu	chr8B1_Mur372416260	NonProperStrand	1	chr16	23110937	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr5	137323473	137358733	protein_coding	Emid2	exon	ENSMUSG00000004415	NonProperStrand	38	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.1263
chr12	36818836	36818862	protein_coding	Bzw2	utr3	ENSMUSG00000020547	ProperStrand	29	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-5.2074
chr7	52382755	52382832	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	chr17	24856620	24856735	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	7	-8.4098
chr6	41636403	41636419	protein_coding	Kel	utr3	ENSMUSG00000029866	NonProperStrand	10	chr9	15119631	15119696	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-14.3442
chr14	63287586	63287614	protein_coding	Serpine3	intron	ENSMUSG00000091155	ProperStrand	210	chr11	6428100	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.1759
chr1	89681109	89681189	protein_coding	Atg16l1	intron	ENSMUSG00000026289	ProperStrand	41	chr1	89681259	89681349	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	2	-10.0584
chr15	82724068	82725637	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	chr5	121655016	121655156	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	3	-1.3410
chr17	24857229	24857319	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr17	13115655	13115735	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	1	-3.9796
chr5	106337347	106337437	protein_coding	Zfp326	intron	ENSMUSG00000029290	ProperStrand	29	chr7	30231511	30231591	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	1	-10.3132
chr9	48814616	48814705	protein_coding	Usp28	intron	ENSMUSG00000032267	ProperStrand	63	chr9	15118334	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.3772
chr13	13529975	13530030	protein_coding	Nid1	exon	ENSMUSG00000005397	ProperStrand	112	chr3	136526736	136526753	protein_coding	Ppp3ca	intron	ENSMUSG00000028161	NonProperStrand	120	1	-10.6679
chr2	154689555	154689596	protein_coding	Raly	exon	ENSMUSG00000027593	ProperStrand	116	chr4	116828379	116828451	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-7.0691
chr9	59523499	59523520	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr4	129306277	129306341	protein_coding	Txlna	exon	ENSMUSG00000053841	ProperStrand	37	3	-18.3097
chr2	80297373	80297389	LINE	L1MB8	L1	chr2L1MB880297262	ProperStrand	53	chr16	48311806	48314021	protein_coding	Dppa2	exon	ENSMUSG00000072419	ProperStrand	9	1	-17.3515
chr19	44040708	44040744	protein_coding	Cpn1	exon	ENSMUSG00000025196	ProperStrand	11	chr11	77995189	77995255	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	2	-15.3288
chr10	20861834	20861850	protein_coding	Myb	exon	ENSMUSG00000019982	NonProperStrand	9	chr4	131826087	131826110	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	1	-13.1024
chr7	137766640	137766656	protein_coding	Tacc2	exon	ENSMUSG00000030852	ProperStrand	95	chr5	108334195	108334307	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-3.9459
chr19	3904234	3904250	protein_coding	Tcirg1	exon	ENSMUSG00000001750	ProperStrand	77	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-8.4271
chr19	8799581	8799646	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	chr17	26360446	26360536	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	1	-3.6093
chr11	103792096	103815298	protein_coding	Nsf	utr5	ENSMUSG00000034187	ProperStrand	20	chr8	124103119	124103142	protein_coding	Gm20388	intron	ENSMUSG00000092329	NonProperStrand	203	2	-19.9983
chr16	4040050	4040126	protein_coding	Trap1	utr3	ENSMUSG00000005981	ProperStrand	25	chr14	47930741	47930757	protein_coding	Mapk1ip1l	exon	ENSMUSG00000021840	ProperStrand	34	2	-19.9457
chr10	59461876	59461893	protein_coding	Anapc16	intron	ENSMUSG00000020107	NonProperStrand	2	chr19	46139005	46139100	protein_coding	Pprc1	exon	ENSMUSG00000055491	ProperStrand	143	1	-19.1036
chr1	127297681	127297771	protein_coding	Actr3	intron	ENSMUSG00000026341	ProperStrand	45	chr12	106269362	106269442	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	2	-7.7850
chr9	22011678	22011694	LTR	RLTR6-int	ERV1	chr9RLTR6-int22011405	NonProperStrand	1	chr4	117317816	117317928	protein_coding	Eri3	intron	ENSMUSG00000033423	ProperStrand	246	1	-inf
chr2	43110993	43111010	LINE	Lx6	L1	chr2Lx643110257	ProperStrand	35	chr1	88252836	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-7.7158
chrX	11635848	11635865	protein_coding	Bcor	exon	ENSMUSG00000040363	NonProperStrand	293	chr11	62416575	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-4.0212
chr2	158451026	158451043	protein_coding	Actr5	exon	ENSMUSG00000037761	NonProperStrand	94	chr2	79843543	79843559	protein_coding	Pde1a	intron	ENSMUSG00000059173	NonProperStrand	275	1	-9.3609
chr4	147992840	147993338	protein_coding	Tardbp	exon	ENSMUSG00000041459	ProperStrand	120	chr11	116938636	116938689	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-4.8087
chr2	104656946	104656969	Low_complexity	G-rich	Low_complexity	chr2G-rich104656917	NonProperStrand	2	chr1	40053934	40053951	protein_coding	Map4k4	exon	ENSMUSG00000026074	ProperStrand	348	1	-17.1994
chr8	96880910	96880927	protein_coding	Slc12a3	exon	ENSMUSG00000031766	ProperStrand	16	chr19	8798484	8798550	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-7.8497
chr11	15212155	15212171	LINE	Lx	L1	chr11Lx15211662	ProperStrand	54	chr19	45100629	45100720	protein_coding	Lzts2	exon	ENSMUSG00000035342	ProperStrand	14	1	-16.5633
chr18	56890727	56892888	protein_coding	Lmnb1	exon	ENSMUSG00000024590	ProperStrand	176	chr9	120038553	120038633	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.2994
chr11	116535503	116535534	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr7	52382776	52382832	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	3	-1.8964
chr10	79316213	79316230	lincRNA	E130317F20Rik	exon	ENSMUSG00000091994	NonProperStrand	97	chr2	158185597	158185653	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	2	-9.0584
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr12	70413651	70415416	protein_coding	Nemf	exon	ENSMUSG00000020982	ProperStrand	77	2	-6.7057
chr7	112959354	112959371	protein_coding	Mrpl17	exon	ENSMUSG00000030879	ProperStrand	9	chr7	29136525	29136570	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.9747
chr8	107892146	107892226	protein_coding	Slc9a5	exon	ENSMUSG00000014786	ProperStrand	26	chr1	84736125	84736172	protein_coding	Trip12	exon	ENSMUSG00000026219	ProperStrand	248	1	-12.1597
chr17	13115655	13115783	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	chr14	76247731	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	7	-3.7862
chr10	75173271	75173293	protein_coding	Cabin1	intron	ENSMUSG00000020196	ProperStrand	62	chr4	53873613	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	1	-8.9793
chr4	130045547	130055338	protein_coding	Snrnp40	exon	ENSMUSG00000074088	ProperStrand	12	chr16	23111787	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.8390
chrX	39029534	39029551	protein_coding	Gria3	utr3	ENSMUSG00000001986	ProperStrand	32	chr16	38158134	38158226	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	2	-15.6609
chr2	180380291	180380371	LINE	L1MD	L1	chr2L1MD180380290	NonProperStrand	1	chr2	177263680	177263770	LTR	ORR1A0	MaLR	chr2ORR1A0177263609	ProperStrand	1	1	-inf
chr10	39243513	39243529	protein_coding	Fyn	intron	ENSMUSG00000019843	NonProperStrand	17	chr14	76247753	76247816	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-6.6490
chr18	57400307	57400324	protein_coding	Megf10	exon	ENSMUSG00000024593	ProperStrand	143	chr11	106362556	106362585	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-5.6903
chr16	96343215	96343248	protein_coding	Hmgn1	utr3	ENSMUSG00000040681	ProperStrand	38	chr17	13115656	13115722	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	1	-8.4488
chr6	72077723	72077741	protein_coding	St3gal5	intron	ENSMUSG00000056091	NonProperStrand	11	chr19	8963027	8963083	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.4574
chr5	145865706	145867914	protein_coding	Arpc1a	exon	ENSMUSG00000029621	ProperStrand	19	chr16	23111766	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.9396
chr11	102861129	102861548	protein_coding	Dcakd	exon	ENSMUSG00000020935	ProperStrand	61	chr1	185857228	185857244	protein_coding	1700056E22Rik	exon	ENSMUSG00000044854	ProperStrand	173	1	-11.1553
chrX	62422091	62422110	LINE	L1_Mus2	L1	chrXL1_Mus262422095	ProperStrand	1	chr17	31722744	31722760	protein_coding	Pknox1	intron	ENSMUSG00000006705	ProperStrand	110	1	-inf
chr6	30373300	30373362	protein_coding	Klhdc10	intron	ENSMUSG00000029775	ProperStrand	14	chr4	122970413	122970513	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	2	-16.4245
chr4	134772458	134772484	protein_coding	Clic4	utr3	ENSMUSG00000037242	ProperStrand	84	chr11	77996578	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-5.4326
chr5	148290977	148291077	protein_coding	Pan3	intron	ENSMUSG00000029647	ProperStrand	57	chr17	24857389	24857512	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	1	-9.7561
chr5	31093938	31093956	protein_coding	Dpysl5	exon	ENSMUSG00000029168	NonProperStrand	38	chr7	19850105	19856866	protein_coding	Vasp	exon	ENSMUSG00000030403	ProperStrand	28	1	-15.7827
chr10	80642165	80643002	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr2	130103464	130103503	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	5	-7.6850
chr10	119286688	119286704	protein_coding	Grip1	intron	ENSMUSG00000034813	ProperStrand	38	chr8	107817430	107817446	protein_coding	Exoc3l	exon	ENSMUSG00000043251	ProperStrand	5	1	-18.6660
chr19	24175345	24176427	protein_coding	Tjp2	exon	ENSMUSG00000024812	ProperStrand	63	chr5	130295479	130295551	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-5.1536
chr9	15120048	15120076	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	chr11	23312340	23314737	protein_coding	Usp34	exon	ENSMUSG00000056342	ProperStrand	68	1	-9.4559
chr14	34776834	34776850	protein_coding	Rbp3	utr3	ENSMUSG00000041534	NonProperStrand	41	chr18	35714186	35714212	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.1545
chr18	63238393	63238412	protein_coding	Fam38b	exon	ENSMUSG00000041482	NonProperStrand	50	chr16	23111696	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-3.9432
chr4	118805192	118805705	protein_coding	Slc2a1	exon	ENSMUSG00000028645	ProperStrand	361	chr4	122968662	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-2.8843
chr8	73419657	73419773	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	chr14	52829460	52829570	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	9	-4.4166
chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	chr12	29320319	29320485	protein_coding	Rps7	exon	ENSMUSG00000061477	ProperStrand	129	1	-8.3414
chr19	41990160	41990247	protein_coding	Pgam1	exon	ENSMUSG00000011752	ProperStrand	124	chr7	148634716	148634806	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-2.6694
chr9	95524996	95525037	antisense	Gm16126	.	ENSMUSG00000086585	NonProperStrand	229	chr11	55296214	55296314	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	9	-inf
chr12	56480304	56480394	protein_coding	1110008L16Rik	exon	ENSMUSG00000021023	NonProperStrand	10	chr9	29531284	29531302	protein_coding	Ntm	intron	ENSMUSG00000059974	ProperStrand	49	1	-17.5865
chr15	57860319	57860419	protein_coding	9130401M01Rik	exon	ENSMUSG00000022362	ProperStrand	4	chr5	130300521	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-7.9077
chr5	110838356	110838446	protein_coding	Fbrsl1	intron	ENSMUSG00000043323	ProperStrand	131	chr15	79913295	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.2173
chr1	91516664	91516716	protein_coding	Agap1	intron	ENSMUSG00000055013	ProperStrand	229	chr11	69481335	69481435	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-1.0689
chr8	125626987	125627005	snoRNA	ENSMUSG00000064450_Snord68	.	ENSMUSG00000064450	ProperStrand	181	chr16	23110455	23110508	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-2.8032
chr6	122286992	122289623	protein_coding	Phc1	utr5	ENSMUSG00000040669	ProperStrand	158	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-5.3292
chr8	108632724	108632824	protein_coding	Nfatc3	exon	ENSMUSG00000031902	ProperStrand	75	chr4	131865948	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.4339
chr2	102142948	102143034	protein_coding	Trim44	utr3	ENSMUSG00000027189	ProperStrand	26	chr19	57685703	57685721	protein_coding	Atrnl1	utr5	ENSMUSG00000054843	ProperStrand	22	5	-inf
chrX	96245892	96245908	protein_coding	Stard8	intron	ENSMUSG00000031216	ProperStrand	142	chr7	117166721	117166781	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-3.2031
chr7	29605335	29605363	protein_coding-noncoding	Hnrnpl	utr5	ENSMUSG00000015165	ProperStrand	23	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	7	-inf
chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	chr2	32049500	32049937	protein_coding	Prrc2b	exon	ENSMUSG00000039262	ProperStrand	344	1	-5.6067
chr6	4645627	4645644	protein_coding	Sgce	intron	ENSMUSG00000004631	ProperStrand	2	chr2	126931606	126931920	protein_coding	Ncaph	exon	ENSMUSG00000034906	ProperStrand	43	1	-inf
chr14	56167546	56167611	protein_coding	Pck2	utr3	ENSMUSG00000040618	ProperStrand	18	chr16	23110987	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-3.3354
chr2	90235316	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	146708677	146708693	protein_coding	Stk38l	exon	ENSMUSG00000001630	ProperStrand	60	1	-4.4627
chr5	137411848	137411879	lincRNA	4933404O12Rik	exon	ENSMUSG00000085062	ProperStrand	5	chr4	123342267	123342285	protein_coding	Macf1	intron	ENSMUSG00000028649	ProperStrand	320	1	-15.1177
chr16	17525555	17525825	protein_coding	Lztr1	exon	ENSMUSG00000022761	ProperStrand	5	chr8	32260352	32260374	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-9.7163
chr10	126736415	126747296	protein_coding	Mars	exon	ENSMUSG00000040354	ProperStrand	38	chr10	23505152	23505270	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-9.8039
chr8	127942082	127942099	protein_coding	Sipa1l2	utr3	ENSMUSG00000001995	ProperStrand	37	chr4	131865855	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.5639
chr6	91706788	91706812	protein_coding	Slc6a6	utr3	ENSMUSG00000030096	ProperStrand	206	chr2	102290960	102290977	protein_coding	Fjx1	exon	ENSMUSG00000075012	ProperStrand	13	1	-13.9581
chr4	43505781	43505872	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr14	3928386	3930648	protein_coding	Gm3002	intron	ENSMUSG00000079399	ProperStrand	26	2	-7.7316
chr9	72816966	72816982	protein_coding	Dyx1c1	exon	ENSMUSG00000092192	ProperStrand	34	chr16	23111701	23111753	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.8630
chr3	93106477	93106494	LINE	Lx8	L1	chr3Lx893106404	ProperStrand	1	chr16	43886794	43886850	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	1	-inf
chr2	90235297	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	103401280	103401296	protein_coding	Tmem108	exon	ENSMUSG00000042757	NonProperStrand	323	4	-6.2319
chr17	43843088	43843104	protein_coding	Cyp39a1	intron	ENSMUSG00000023963	NonProperStrand	81	chr3	123210912	123210985	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.5972
chr9	45198928	45199653	protein_coding	Fxyd6	exon	ENSMUSG00000066705	NonProperStrand	108	chr2	89368462	89368479	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	1	-9.1796
chr9	112045859	112045877	protein_coding	Arpp21	exon	ENSMUSG00000032503	ProperStrand	3	chr2	26493366	26493473	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-9.9740
chr1	55135152	55141420	protein_coding	Hspd1	exon	ENSMUSG00000025980	ProperStrand	140	chr7	116663633	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-3.6796
chr13	56175323	56175406	protein_coding	H2afy	utr3	ENSMUSG00000015937	ProperStrand	103	chr7	116663715	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.6376
chr11	98851333	98851353	SINE	B3	B2	chr11B398851263	ProperStrand	2	chr9	120037980	120038027	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	2	-inf
chr4	53513908	53513989	protein_coding	Slc44a1	intron	ENSMUSG00000028412	ProperStrand	38	chr11	69483194	69483228	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.2572
chr10	87892266	87892282	protein_coding	Gnptab	exon	ENSMUSG00000035311	ProperStrand	65	chr4	153410349	153410365	protein_coding	Ccdc27	exon	ENSMUSG00000039492	ProperStrand	94	1	-12.2498
chr12	88488443	88496424	protein_coding	Pomt2	exon	ENSMUSG00000034126	NonProperStrand	331	chr2	30177739	30177769	protein_coding	Nup188	exon	ENSMUSG00000052533	ProperStrand	96	1	-8.9492
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr4	56910496	56910610	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-2.0447
chr9	15119967	15120037	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	chr14	52829460	52829519	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-2.4229
chr8	120133054	120133133	protein_coding	Plcg2	exon	ENSMUSG00000034330	ProperStrand	57	chr10	23505156	23505246	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-7.5171
chr7	123531399	123531563	protein_coding	Pik3c2a	exon	ENSMUSG00000030660	ProperStrand	2	chr1	162966004	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-10.9191
chr5	145603426	145603509	protein_coding	Trrap	exon	ENSMUSG00000045482	ProperStrand	399	chr2	106223034	106223053	protein_coding	Dcdc5	intron	ENSMUSG00000074981	NonProperStrand	7	2	-21.9164
chr1	30888306	30888367	protein_coding	Phf3	exon	ENSMUSG00000048874	ProperStrand	102	chr10	39978350	39978440	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-4.4356
chr2	90235307	90235338	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	86119840	86119857	SINE	B3A	B2	chr17B3A86119758	NonProperStrand	18	1	-6.8363
chr19	4612157	4612207	protein_coding	Lrfn4	exon	ENSMUSG00000045045	ProperStrand	19	chr7	72016892	72016908	protein_coding	Ndnl2	utr3	ENSMUSG00000070520	ProperStrand	10	1	-18.8818
mmu-miR-2137	0	21	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	chr1	84790333	84790446	protein_coding	Trip12	exon	ENSMUSG00000026219	ProperStrand	248	1	-8.7145
chr19	8800355	8800482	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	chr15	79908928	79909021	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	26	-6.9712
chr18	75160712	75160776	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	chr16	18240832	18240932	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	1	-5.0574
chr5	140817103	140817193	protein_coding	Snx8	utr3	ENSMUSG00000029560	ProperStrand	106	chr17	24857763	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	10	-18.7866
chr4	151426740	151430168	protein_coding	Nol9	exon	ENSMUSG00000028948	ProperStrand	93	chr19	8963044	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	11	-21.7072
chr18	35743391	35743457	protein_coding	Matr3	intron	ENSMUSG00000037236	ProperStrand	90	chr9	120038557	120038647	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.3347
chr2	164311966	164311983	protein_coding	Dbndd2	utr5	ENSMUSG00000017734	ProperStrand	53	chr12	58643588	58643606	protein_coding	Foxa1	exon	ENSMUSG00000035451	ProperStrand	25	1	-15.3258
chr4	46499767	46499784	SINE	ID_B1	B4	chr4ID_B146499735	ProperStrand	33	chr16	23111720	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.9163
chr8	32239595	32239611	protein_coding	Rnf122	utr3	ENSMUSG00000039328	NonProperStrand	42	chr18	35716795	35716880	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-7.2332
chr18	37911790	37911806	protein_coding	Pcdhga9	intron	ENSMUSG00000023036	ProperStrand	245	chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	1	-8.8675
chr1	162965531	162965595	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr13	21259940	21259978	tRNA	tRNA1000-LysTTT	.	553416	ProperStrand	86	1	-2.6368
chr4	149044037	149044056	protein_coding	Pik3cd	intron	ENSMUSG00000039936	NonProperStrand	17	chr18	35716811	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.4666
chr7	51503524	51503548	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	chr6	70805436	70805548	snoRNA	ENSMUSG00000065750_SNORA5	.	ENSMUSG00000065750	ProperStrand	165	1	-6.6036
chr5	17152087	17152106	protein_coding	Sema3c	intron	ENSMUSG00000028780	NonProperStrand	7	chr2	158185576	158185653	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	3	-19.7798
chr4	110630646	110630663	protein_coding	Agbl4	intron	ENSMUSG00000061298	NonProperStrand	33	chr7	52382237	52382275	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-9.4862
chr9	98254738	98254818	protein_coding-noncoding	Nmnat3	utr5	ENSMUSG00000032456	NonProperStrand	1	chr9	98254574	98254664	protein_coding	Nmnat3	utr5	ENSMUSG00000032456	NonProperStrand	19	1	-inf
chr5	76613360	76628375	protein_coding	Tmem165	exon	ENSMUSG00000029234	ProperStrand	22	chr17	72304252	72304268	protein_coding	Alk	intron	ENSMUSG00000055471	NonProperStrand	17	1	-18.1142
chr13	9633989	9634073	protein_coding	Dip2c	exon	ENSMUSG00000048264	ProperStrand	27	chr11	62417006	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	2	-12.2555
chr12	110892840	110892905	snoRNA	ENSMUSG00000064621_AF357355	.	ENSMUSG00000064621	ProperStrand	60	chr1	162965994	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-3.6033
chr9	65127126	65127142	protein_coding	Cilp	exon	ENSMUSG00000042254	ProperStrand	212	chr19	8798521	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-2.8554
chr19	46449531	46449547	protein_coding	Tmem180	utr3	ENSMUSG00000025227	NonProperStrand	3	chr2	26494771	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-9.2771
chr15	82034864	82034946	protein_coding	Srebf2	utr3	ENSMUSG00000022463	ProperStrand	592	chr2	38436999	38437089	protein_coding	Nek6	intron	ENSMUSG00000026749	ProperStrand	10	1	-12.3934
chr15	99239223	99239274	protein_coding	Tmbim6	utr3	ENSMUSG00000023010	ProperStrand	64	chr17	36097663	36097764	protein_coding	Abcf1	exon	ENSMUSG00000038762	ProperStrand	206	1	-10.7095
chr4	125852583	125852609	protein_coding	Thrap3	exon	ENSMUSG00000043962	ProperStrand	84	chr13	51743595	51743706	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	5	-inf
chr7	86600975	86601351	protein_coding	Polg	exon	ENSMUSG00000039176	ProperStrand	93	chr17	13115704	13115784	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	1	-6.6632
chr11	23180403	23180438	protein_coding	Xpo1	exon	ENSMUSG00000020290	ProperStrand	123	chr1	162968463	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-4.6831
chr5	120935177	120935646	protein_coding	Plbd2	utr3	ENSMUSG00000029598	ProperStrand	22	chr7	117189971	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	4	-16.4088
chr9	24549590	24549614	protein_coding	Tbx20	intron	ENSMUSG00000031965	NonProperStrand	110	chr8	77742558	77742574	protein_coding	Rasd2	exon	ENSMUSG00000034472	NonProperStrand	237	1	-9.3430
chr11	104987835	104987851	protein_coding	Mettl2	exon	ENSMUSG00000020691	ProperStrand	21	chr16	23110897	23110919	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.5481
chr15	84194361	84194451	LTR	ORR1A4	MaLR	chr15ORR1A484194296	ProperStrand	1	chr2	98801278	98801368	LTR	MTA_Mm	MaLR	chr2MTA_Mm98801260	ProperStrand	1	1	-inf
chr11	61332221	61332258	protein_coding	Epn2	utr3	ENSMUSG00000001036	ProperStrand	16	chr3	123210854	123210887	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-4.4647
chr17	53823680	53823746	protein_coding	Sgol1	intron	ENSMUSG00000023940	ProperStrand	17	chr14	76247754	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	9	-inf
chr4	43505656	43505731	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr12	83271340	83271396	protein_coding	Sipa1l1	utr5	ENSMUSG00000042700	ProperStrand	84	6	-14.3171
chr2	178217044	178217061	protein_coding	Cdh26	intron	ENSMUSG00000039155	NonProperStrand	77	chr4	131908300	131908450	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.0780
chr11	62676241	62681100	protein_coding	Trim16	utr3	ENSMUSG00000047821	ProperStrand	1	chr10	39978350	39978430	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-inf
chr17	6947177	6959173	protein_coding	Ezr	exon	ENSMUSG00000052397	ProperStrand	126	chr9	15119706	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-2.7132
chr5	151357081	151359508	protein_coding	Brca2	exon	ENSMUSG00000041147	ProperStrand	75	chr7	116664811	116664901	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.1729
chr7	116663667	116663767	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	chr7	67125787	67125819	snoRNA	ENSMUSG00000089375_Snord107	.	ENSMUSG00000089375	ProperStrand	451	3	-0.7472
chr2	164651993	164652022	protein_coding	Zswim1	utr3	ENSMUSG00000017764	ProperStrand	68	chrX	34622905	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-2.9468
chr7	4745701	4746036	protein_coding	Rpl28	exon	ENSMUSG00000030432	ProperStrand	220	chr17	24665446	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-2.5477
chr15	98479079	98479119	protein_coding	Ddx23	exon	ENSMUSG00000003360	ProperStrand	63	chr8	73419703	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.0427
chr9	118835586	118835605	protein_coding	Ctdspl	utr5	ENSMUSG00000047409	NonProperStrand	9	chr16	23110454	23110517	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-6.0870
chr17	65892495	65892575	LINE	Lx7	L1	chr17Lx765892479	NonProperStrand	1	chr17	65892612	65892702	SINE	B2_Mm2	B2	chr17B2_Mm265892586	ProperStrand	1	1	-inf
chr4	85016349	85016365	protein_coding	Sh3gl2	intron	ENSMUSG00000028488	NonProperStrand	313	chr1	88252856	88252902	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-3.4681
chr16	13793076	13796104	protein_coding	Rrn3	exon	ENSMUSG00000022682	ProperStrand	58	chr4	131866153	131866233	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-3.7281
chr10	75214317	75214334	protein_coding	Cabin1	exon	ENSMUSG00000020196	ProperStrand	62	chr1	89673511	89673587	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	2	-5.5040
chr2	24816009	24816098	protein_coding	Zmynd19	utr3	ENSMUSG00000026974	ProperStrand	18	chr4	126001456	126001475	protein_coding	Tekt2	intron	ENSMUSG00000028845	ProperStrand	31	1	-16.9000
chr10	10673954	10673971	protein_coding	Grm1	intron	ENSMUSG00000019828	ProperStrand	38	chr4	131908835	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.9012
chr9	46006743	46006759	protein_coding	Sik3	exon	ENSMUSG00000034135	NonProperStrand	21	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.5891
chr14	46089028	46092478	protein_coding	Fermt2	exon	ENSMUSG00000037712	ProperStrand	23	chr3	153574599	153574655	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	1	-11.6145
chr9	106363681	106364403	protein_coding	Pcbp4	exon	ENSMUSG00000023495	NonProperStrand	2	chr15	88993001	88993022	protein_coding	Plxnb2	exon	ENSMUSG00000036606	NonProperStrand	11	1	-21.3789
chr4	43505657	43505721	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr15	82178568	82178628	protein_coding	1500032L24Rik	intron	ENSMUSG00000022452	ProperStrand	4	1	-8.5468
chr2	160722885	160722967	protein_coding	Lpin3	exon	ENSMUSG00000027412	ProperStrand	31	chr11	78150285	78150301	protein_coding	Pigs	exon	ENSMUSG00000041958	NonProperStrand	138	1	-12.9758
chr15	7985840	7992766	protein_coding	Wdr70	exon	ENSMUSG00000039828	ProperStrand	16	chr16	23111777	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.2713
chr9	120039999	120040118	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	chr10	93032370	93032387	protein_coding	Ccdc38	intron	ENSMUSG00000036168	NonProperStrand	7	1	-13.9563
chr9	79915104	79915120	protein_coding	Senp6	utr5	ENSMUSG00000034252	ProperStrand	110	chr3	108357378	108357406	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-3.4046
chr19	36920215	36923835	protein_coding	Tnks2	exon	ENSMUSG00000024811	ProperStrand	133	chr7	30231511	30231591	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	1	-7.2593
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr4	149620863	149621659	protein_coding	Eno1	exon	ENSMUSG00000063524	ProperStrand	432	1	-4.4452
chr10	60638775	60638796	protein_coding	Tbata	intron	ENSMUSG00000020096	NonProperStrand	1	chr18	35716697	35716821	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-inf
chr9	64023265	64023285	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	chr1	39605591	39605691	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-2.7106
chr17	24301670	24301708	protein_coding	Atp6v0c	exon	ENSMUSG00000024121	ProperStrand	75	chrX	40944841	40944857	protein_coding	Gm362	exon	ENSMUSG00000078320	ProperStrand	129	1	-11.3278
chr5	111688409	111688499	lincRNA	Ttc28	intron	ENSMUSG00000033209	NonProperStrand	36	chr13	83717688	83717778	protein_coding	Mef2c	intron	ENSMUSG00000005583	ProperStrand	4	1	-19.8943
chr4	144834746	144834764	protein_coding	Tnfrsf1b	intron	ENSMUSG00000028599	ProperStrand	13	chr15	79908958	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-8.5451
chr11	97642951	97643080	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	chr10	23506276	23506348	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	12	-0.9347
chr5	74489206	74489286	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr7	106628072	106628162	snoRNA	ENSMUSG00000064966_Snord15b	.	ENSMUSG00000064966	ProperStrand	74	1	-5.2128
chr2	4974190	4974207	protein_coding	Optn	exon	ENSMUSG00000026672	ProperStrand	451	chr19	8963027	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	4	-0.9494
chr5	108333604	108333662	snoRNA	ENSMUSG00000064453_Snord21	.	ENSMUSG00000064453	ProperStrand	201	chr16	23110503	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-0.7242
chr6	94576497	94577960	protein_coding	Lrig1	exon	ENSMUSG00000030029	ProperStrand	26	chr7	116663633	116663712	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.0328
chr2	90235294	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	87525135	87525238	protein_coding	Hook2	exon	ENSMUSG00000052566	ProperStrand	204	2	-4.0094
chr7	150757492	150760508	protein_coding	Cars	exon	ENSMUSG00000010755	ProperStrand	62	chr9	120038613	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	12	-inf
chr3	53349352	53349369	protein_coding	Frem2	exon	ENSMUSG00000037016	NonProperStrand	11	chr11	69483212	69483286	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-5.6603
chr7	52378442	52378481	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	chr15	98350195	98350285	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	6	-6.9068
chr10	100000179	100000226	protein_coding	Cep290	utr5	ENSMUSG00000019971	ProperStrand	12	chr16	23110968	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-4.4633
chr17	71990923	71990981	snoRNA	ENSMUSG00000092713_CT010429.1	.	ENSMUSG00000092713	ProperStrand	182	chr5	74489567	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	8	-16.7312
chr16	57391760	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr2	26494708	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	5	-0.8226
chr18	64328476	64328492	antisense	1700091E21Rik	.	ENSMUSG00000086128	NonProperStrand	35	chr1	135029557	135029604	protein_coding	Ppp1r15b	exon	ENSMUSG00000046062	ProperStrand	46	1	-14.9451
chr6	124761129	124761191	protein_coding	Tpi1	utr3	ENSMUSG00000023456	ProperStrand	94	chr8	73419657	73419686	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.3472
chr9	83287697	83287800	protein_coding	Lca5	utr3	ENSMUSG00000032258	ProperStrand	13	chr16	23111777	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.6795
chr16	23110456	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	chr8	112363235	112363274	snoRNA	ENSMUSG00000077549_Snord71	.	ENSMUSG00000077549	ProperStrand	196	1	-0.7516
chr14	56282677	56282743	protein_coding	Nedd8	intron	ENSMUSG00000010376	ProperStrand	27	chr4	131908265	131908355	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	5	-12.6217
chr4	111928995	111929011	protein_coding	Skint3	intron	ENSMUSG00000070868	NonProperStrand	48	chr3	123210958	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.4382
chr7	13516170	13516207	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr4	149611353	149611423	protein_coding	Eno1	utr5	ENSMUSG00000063524	ProperStrand	432	1	-4.7809
chr15	102541852	102541919	protein_coding	Calcoco1	exon	ENSMUSG00000023055	ProperStrand	29	chr11	68886928	68887018	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-5.5512
chr2	179937133	179941440	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr8	13876097	13876177	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-3.6544
chr4	116827118	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	chr10	23505151	23505264	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	28	-1.4872
chr4	95262136	95262152	protein_coding	Fggy	intron	ENSMUSG00000028573	ProperStrand	44	chr18	73693166	73693186	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-6.1341
chr13	74498393	74498483	protein_coding	Ccdc127	utr3	ENSMUSG00000021578	ProperStrand	12	chr16	23110898	23110978	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.4686
chr4	41064970	41070331	protein_coding	Nol6	exon	ENSMUSG00000028430	ProperStrand	98	chr16	23110828	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	9	-4.9474
chr2	130109497	130109513	protein_coding	Idh3b	exon	ENSMUSG00000027406	ProperStrand	146	chr11	101466285	101466351	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	1	-7.0995
chr11	101293489	101293552	protein_coding	Rundc1	intron	ENSMUSG00000035007	ProperStrand	6	chr4	53873618	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	1	-13.8012
chr4	131399490	131399506	protein_coding	Mecr	exon	ENSMUSG00000028910	NonProperStrand	109	chr7	116664809	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-4.5774
chrX	70952410	70952459	protein_coding	Bcap31	exon	ENSMUSG00000002015	ProperStrand	21	chr8	32260335	32260417	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	2	-10.8614
chr11	95910323	95910352	protein_coding	Ube2z	utr3	ENSMUSG00000014349	ProperStrand	41	chr9	39358287	39358304	protein_coding	Olfr958	exon	ENSMUSG00000050853	NonProperStrand	266	1	-11.0961
chr6	120432385	120432401	protein_coding	Il17ra	exon	ENSMUSG00000002897	ProperStrand	61	chr11	62416951	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-6.0106
chr11	3426352	3426368	protein_coding	Smtn	exon	ENSMUSG00000020439	ProperStrand	222	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-6.3273
chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	chr11	6428141	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-0.8488
chr7	132806527	132806940	protein_coding	Gtf3c1	exon	ENSMUSG00000032777	ProperStrand	161	chr7	117190018	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-3.0738
chr3	113328497	113328587	protein_coding	Rnpc3	intron	ENSMUSG00000027981	ProperStrand	9	chr7	148634702	148634782	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-7.7646
chr19	5801182	5801259	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr9	64022854	64022914	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-2.5217
chr5	115147170	115147242	LTR	MTE2a	MaLR	chr5MTE2a115147064	NonProperStrand	1	chr4	149611389	149611428	protein_coding	Eno1	utr5	ENSMUSG00000063524	ProperStrand	432	1	-inf
chr16	22382066	22382160	protein_coding	Etv5	utr3	ENSMUSG00000013089	ProperStrand	88	chr9	15118327	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-2.7786
chr5	130924898	130924915	protein_coding	Caln1	utr5	ENSMUSG00000060371	ProperStrand	32	chr2	130103751	130103794	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-9.7372
chr11	69481387	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	chr2	166888978	166888999	snoRNA	ENSMUSG00000077515_SNORD12	.	ENSMUSG00000077515	ProperStrand	191	2	-2.4956
chr10	74644406	74644467	protein_coding	Bcr	exon	ENSMUSG00000009681	ProperStrand	19	chr18	33954815	33954905	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-5.7214
chr2	24246131	24246232	protein_coding	Psd4	intron	ENSMUSG00000026979	ProperStrand	7	chr9	61264576	61264611	protein_coding	Tle3	utr3	ENSMUSG00000032280	ProperStrand	88	1	-16.9089
chr5	114228201	114228226	protein_coding	Iscu	utr3	ENSMUSG00000025825	ProperStrand	15	chr11	6519810	6519867	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-10.7539
chr7	52309977	52309993	protein_coding	Prrg2	exon	ENSMUSG00000007837	NonProperStrand	281	chr10	126621116	126621155	protein_coding	Arhgef25	exon	ENSMUSG00000019467	ProperStrand	12	1	-13.5040
chr2	178194847	178194864	protein_coding	Cdh26	exon	ENSMUSG00000039155	NonProperStrand	77	chr5	28535820	28535923	protein_coding	Cnpy1	utr5	ENSMUSG00000044681	ProperStrand	15	1	-15.6295
chr11	69265883	69265900	antisense	6030455H03Rik	.	ENSMUSG00000086591	ProperStrand	6	chr11	102294588	102294611	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	1	-13.6547
chr7	112884940	112885030	protein_coding	Rrp8	utr5	ENSMUSG00000030888	ProperStrand	8	chr3	68889147	68889226	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	3	-16.7986
chr9	78326826	78326870	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr9	110544350	110544366	protein_coding	Nbeal2	exon	ENSMUSG00000056724	ProperStrand	161	1	-4.4177
chr16	14448623	14458017	protein_coding	Abcc1	utr5	ENSMUSG00000023088	ProperStrand	35	chr16	23111413	23111493	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.0755
chr9	26836984	26837022	protein_coding	Vps26b	exon	ENSMUSG00000031988	ProperStrand	9	chr16	23110966	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-8.1007
chr5	136488069	136488109	protein_coding	Dtx2	exon	ENSMUSG00000004947	ProperStrand	10	chr16	23110456	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.8693
chr2	9985901	9985917	protein_coding	Atp5c1	exon	ENSMUSG00000025781	ProperStrand	138	chr14	33005095	33005138	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-2.4926
chr11	103592175	103592192	protein_coding	Wnt9b	exon	ENSMUSG00000018486	ProperStrand	2	chr19	8799581	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-14.2184
chr2	118862897	118862933	protein_coding	Rpusd2	exon	ENSMUSG00000027324	ProperStrand	11	chr16	23110971	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.6241
chr3	126436336	126436353	protein_coding	Camk2d	intron	ENSMUSG00000053819	NonProperStrand	20	chr19	8799581	8799644	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-8.9766
chr15	84027464	84027481	protein_coding	Samm50	exon	ENSMUSG00000022437	ProperStrand	51	chr18	35716762	35716829	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.4421
chr10	79879893	79880080	protein_coding	Tcf3	exon	ENSMUSG00000020167	ProperStrand	73	chr5	74489645	74489680	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	2	-5.8267
chr2	128438558	128438591	protein_coding	Anapc1	utr3	ENSMUSG00000014355	ProperStrand	38	chr9	15118330	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-4.3239
chr8	117111822	117111842	protein_coding	Wwox	intron	ENSMUSG00000004637	ProperStrand	41	chr10	120362190	120362315	protein_coding	Lemd3	utr3	ENSMUSG00000048661	ProperStrand	32	1	-15.3579
chr1	72760136	72760157	protein_coding	Rpl37a	utr3	ENSMUSG00000046330	ProperStrand	94	chr16	23109029	23109091	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-6.3920
chr16	59554443	59554459	protein_coding	Crybg3	exon	ENSMUSG00000022723	NonProperStrand	3	chr5	108334195	108334330	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-11.1157
chr13	35069920	35070535	protein_coding	Eci2	exon	ENSMUSG00000021417	ProperStrand	6	chr4	131908357	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-5.6461
chr4	116991019	116991036	protein_coding	Rnf220	intron	ENSMUSG00000028677	ProperStrand	131	chr11	106362303	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-4.3331
chr17	75790277	75790293	protein_coding	Ltbp1	utr3	ENSMUSG00000001870	NonProperStrand	66	chr7	29136525	29136600	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.2056
chr6	61130054	61130715	protein_coding	Fam190a	intron	ENSMUSG00000039578	ProperStrand	28	chr7	24713726	24713742	protein_coding	Vmn1r179	exon	ENSMUSG00000046924	NonProperStrand	69	1	-14.5703
chr4	127033190	127033211	protein_coding	Gjb5	exon	ENSMUSG00000042357	ProperStrand	9	chr2	26493366	26493474	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	3	-17.2533
chr16	57391496	57391755	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr2	130101255	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	NonProperStrand	4	1	-15.9781
chr11	116468563	116468640	protein_coding	Rhbdf2	exon	ENSMUSG00000020806	ProperStrand	20	chr4	85016349	85016365	protein_coding	Sh3gl2	intron	ENSMUSG00000028488	NonProperStrand	313	1	-12.2312
chr7	149027742	149028130	protein_coding	Muc5b	exon	ENSMUSG00000066108	NonProperStrand	5	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-6.5022
chr13	73463407	73463423	protein_coding	Ndufs6	intron	ENSMUSG00000021606	NonProperStrand	52	chrX	131341994	131342041	protein_coding	Armcx2	utr5	ENSMUSG00000033436	ProperStrand	12	1	-16.9374
mmu-miR-6240	3	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr11	115104844	115104861	protein_coding	Tmem104	exon	ENSMUSG00000045980	NonProperStrand	21	1	-8.0023
chr18	35102921	35105621	protein_coding	Hspa9	exon	ENSMUSG00000024359	ProperStrand	166	chr19	8799058	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-3.8786
chr16	22246921	22247317	protein_coding	Tra2b	exon	ENSMUSG00000022858	ProperStrand	32	chr11	98878378	98878468	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	6	-19.7644
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	73270052	73270069	protein_coding	Wipf1	utr3	ENSMUSG00000075284	ProperStrand	6	1	-9.1372
chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	chr1	162967490	162967508	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-0.9133
chr13	95213672	95213762	protein_coding	Ap3b1	intron	ENSMUSG00000021686	ProperStrand	96	chr1	89673604	89673684	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-2.4362
chr13	23647596	23647654	protein_coding	Hist1h1d	utr3	ENSMUSG00000052565	ProperStrand	78	chr7	52382755	52382799	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	4	-18.4715
chr10	127996301	127996369	protein_coding	Pa2g4	exon	ENSMUSG00000025364	ProperStrand	72	chrX	93136011	93136027	protein_coding	Las1l	exon	ENSMUSG00000057421	ProperStrand	248	1	-10.1017
chr1	95242816	95246953	protein_coding	Ppp1r7	exon	ENSMUSG00000026275	ProperStrand	44	chr3	123210854	123210877	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.5877
chr5	74489215	74489305	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr7	52715069	52715089	protein_coding	Ftl1	utr5	ENSMUSG00000050708	ProperStrand	807	1	-1.1003
chr8	71636879	71636979	protein_coding	Atp6v1b2	utr3	ENSMUSG00000006273	ProperStrand	29	chr16	23110852	23110916	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0921
chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr5	138086627	138086644	protein_coding	Irs3	exon	ENSMUSG00000047182	ProperStrand	2	1	-13.8986
chr1	94919522	94919563	protein_coding	Kif1a	exon	ENSMUSG00000014602	ProperStrand	18	chr3	123210854	123210889	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-4.2354
chr1	23422790	23422808	LINE	Lx9	L1	chr1Lx923422640	ProperStrand	2	chr2	91436228	91436302	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-14.9566
chr15	78859568	78859648	pseudogene	H1f0	.	ENSMUSG00000048769	ProperStrand	6	chr7	116663668	116663758	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-11.5593
chr13	9833571	9833660	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr8	125985569	125985637	protein_coding	Def8	utr3	ENSMUSG00000001482	ProperStrand	19	3	-16.4619
chr15	83188795	83188895	protein_coding	1700001L05Rik	utr5	ENSMUSG00000075511	ProperStrand	14	chr11	62416623	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-8.0774
chr9	103255939	103255966	protein_coding	Cdv3	utr3	ENSMUSG00000032803	ProperStrand	68	chr5	130300420	130300519	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.2975
chr4	130264414	130264514	protein_coding	Pum1	intron	ENSMUSG00000028580	ProperStrand	131	chr7	116664794	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	7	-11.6015
chr7	52382237	52382314	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	chr10	110918549	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	11	-8.3623
chr12	11098613	11098629	protein_coding	Kcns3	exon	ENSMUSG00000043673	ProperStrand	19	chr16	23111449	23111496	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.1411
chr9	61779706	61779884	protein_coding	Kif23	exon	ENSMUSG00000032254	ProperStrand	41	chr11	6428065	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.8955
chr18	10354222	10354238	protein_coding	Greb1l	intron	ENSMUSG00000042942	ProperStrand	23	chr15	102310038	102310083	protein_coding	Pcbp2	intron	ENSMUSG00000056851	ProperStrand	164	1	-13.2371
chr11	113231172	113325324	protein_coding	Slc39a11	exon	ENSMUSG00000041654	ProperStrand	25	chr5	147646793	147646848	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	1	-9.7229
chr6	55018077	55019343	protein_coding	Gars	exon	ENSMUSG00000029777	ProperStrand	71	chr12	112779227	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-4.4532
chr11	54272901	54272920	protein_coding	Fnip1	intron	ENSMUSG00000035992	NonProperStrand	2	chr19	8963030	8963085	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-inf
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr2	83693562	83693578	protein_coding	Fam171b	exon	ENSMUSG00000048388	NonProperStrand	175	1	-11.0044
chr14	61113419	61113436	LINE	L1MB3	L1	chr14L1MB361113375	NonProperStrand	72	chr8	73419748	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.8058
chr2	93040341	93040384	protein_coding	Trp53i11	utr3	ENSMUSG00000068735	ProperStrand	46	chr7	29136554	29136654	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.8242
chr5	65952377	65959127	protein_coding	Ube2k	intron	ENSMUSG00000029203	ProperStrand	289	chr2	26494710	26494824	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-1.5108
chr4	151342614	151342642	protein_coding	Dnajc11	exon	ENSMUSG00000039768	ProperStrand	15	chr5	145532325	145532393	protein_coding	Trrap	intron	ENSMUSG00000045482	ProperStrand	399	2	-18.7561
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr17	88036169	88039252	protein_coding	Epcam	exon	ENSMUSG00000045394	ProperStrand	43	2	-11.3240
chr3	123337342	123337359	protein_coding	Ndst3	intron	ENSMUSG00000027977	NonProperStrand	16	chrX	84483706	84483753	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-10.9290
chr19	6261807	6261824	protein_coding	Atg2a	exon	ENSMUSG00000024773	ProperStrand	97	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-4.2887
chr2	125106653	125106672	SINE	B1_Mus1	Alu	chr2B1_Mus1125106645	NonProperStrand	1	chr5	119171783	119171877	protein_coding	Med13l	utr5	ENSMUSG00000018076	ProperStrand	226	1	-inf
chr5	8424457	8424510	protein_coding	Slc25a40	intron	ENSMUSG00000054099	ProperStrand	5	chr16	23110891	23110981	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr12	74210301	74210329	protein_coding	Six4	exon	ENSMUSG00000034460	ProperStrand	33	chr5	115940325	115940406	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	15	-19.2389
chr14	26408798	26408815	protein_coding	Zmiz1	intron	ENSMUSG00000007817	ProperStrand	34	chr7	29136525	29136575	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.3698
chr10	29066765	29066814	protein_coding	Rnf146	exon	ENSMUSG00000038876	ProperStrand	4	chr16	23110530	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-13.0671
chr19	34048069	34050969	protein_coding	Lipf	exon	ENSMUSG00000024768	NonProperStrand	1	chr11	106362638	106362698	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-inf
chr11	29421332	29421349	SINE	B3A	B2	chr11B3A29421267	NonProperStrand	21	chr17	35087945	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-7.2845
chr2	27319515	27319615	protein_coding	Brd3	exon	ENSMUSG00000026918	ProperStrand	85	chr19	25016725	25016785	snoRNA	ENSMUSG00000064896_SNORA19	.	ENSMUSG00000064896	ProperStrand	88	1	-11.8427
chr7	148634701	148634791	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	NonProperStrand	18	chr7	116663668	116663748	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	NonProperStrand	51	1	-16.0942
chr12	55835612	55835702	snRNA	ENSMUSG00000075960_U1	.	ENSMUSG00000075960	ProperStrand	210	chr11	62416594	62416624	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-2.8310
chr11	97489600	97489617	protein_coding	E130012A19Rik	exon	ENSMUSG00000043439	NonProperStrand	110	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.2201
chr6	47880909	47880999	protein_coding	Zfp212	exon	ENSMUSG00000052763	ProperStrand	20	chr4	131865411	131865491	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-6.1433
chr17	24752429	24752512	protein_coding	Tsc2	exon	ENSMUSG00000002496	ProperStrand	27	chr8	129468745	129468780	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	4	-18.1727
chr9	78326572	78326766	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr2	5635374	5635390	protein_coding	Camk1d	utr5	ENSMUSG00000039145	NonProperStrand	15	3	-22.6167
chr4	43505656	43505896	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr4	132394349	132394464	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	3	-1.2085
chr15	98885868	98885885	protein_coding	Prph	exon	ENSMUSG00000023484	NonProperStrand	5	chr9	59523471	59523528	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	1	-12.3304
chr1	36125140	36125156	Simple_repeat	(CGGGG)n	Simple_repeat	chr1(CGGGG)n36125104	ProperStrand	2	chr19	8963024	8963081	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-9.4105
chr10	95725529	95725545	DNA	URR1A	MER1_type	chr10URR1A95725393	ProperStrand	4	chr7	117190016	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-8.8371
chr19	7352794	7357371	protein_coding	Mark2	intron	ENSMUSG00000024969	ProperStrand	75	chr4	131908236	131908345	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-2.1737
chr11	6428035	6428169	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr9	15119287	15119427	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	22	-1.2962
chr9	50816824	50816841	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	chr16	17210492	17210512	protein_coding	Rimbp3	exon	ENSMUSG00000071636	ProperStrand	67	2	-17.9857
chr11	50069599	50069675	protein_coding	Maml1	utr3	ENSMUSG00000050567	ProperStrand	29	chr10	90581049	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-6.2336
chr16	37384897	37384913	protein_coding	Stxbp5l	utr5	ENSMUSG00000022829	ProperStrand	332	chr11	62416578	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-3.6979
chrX	55437636	55437653	pseudogene	Gm14649	.	ENSMUSG00000081837	NonProperStrand	5	chr5	115939536	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-13.0219
chr10	25079694	25079784	protein_coding	Epb4.1l2	utr5	ENSMUSG00000019978	ProperStrand	105	chr7	116664841	116664921	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.6413
chr8	125614047	125614103	protein_coding	Spg7	exon	ENSMUSG00000000738	ProperStrand	40	chr4	131908236	131908350	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-7.8408
chr11	90507532	90507601	protein_coding	Tom1l1	utr3	ENSMUSG00000020541	ProperStrand	7	chrX	57529958	57530561	protein_coding	Atp11c	exon	ENSMUSG00000062949	ProperStrand	12	1	-21.2490
chr2	69587833	69587912	protein_coding	Ppig	exon	ENSMUSG00000042133	ProperStrand	13	chr4	131865908	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-7.6072
chr3	55841178	55841194	protein_coding	Nbea	utr5	ENSMUSG00000027799	NonProperStrand	115	chr17	66706414	66706487	protein_coding	1110012J17Rik	intron	ENSMUSG00000052105	ProperStrand	60	1	-12.0075
chr16	54679541	54679559	LTR	MYSERV16_I-int	ERVK	chr16MYSERV16_I-int54679027	NonProperStrand	31	chr11	50115339	50117848	protein_coding	Canx	exon	ENSMUSG00000020368	ProperStrand	296	1	-11.4478
chr11	94502578	94502647	protein_coding	Lrrc59	exon	ENSMUSG00000020869	ProperStrand	115	chr12	100023566	100023894	protein_coding	Zc3h14	exon	ENSMUSG00000021012	ProperStrand	27	1	-13.6195
chr14	51427119	51427219	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr11	68876541	68876574	tRNA	tRNA1821-SerGCT	.	442905	ProperStrand	39	1	-8.0708
chr16	91729701	91729723	protein_coding	Itsn1	utr5	ENSMUSG00000022957	ProperStrand	172	chr14	28272978	28272994	protein_coding	D14Abb1e	exon	ENSMUSG00000040651	ProperStrand	49	1	-11.6085
chr18	68001289	68001379	protein_coding	Cep192	exon	ENSMUSG00000024542	ProperStrand	59	chr11	116938557	116938637	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-6.1923
chrX	152278281	152278361	protein_coding-noncoding	Gm15155	utr5	ENSMUSG00000055109	ProperStrand	1	chrX	152278406	152278496	protein_coding	Gm15155	intron	ENSMUSG00000055109	ProperStrand	9	1	-inf
chr9	78328087	78328161	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr2	181604928	181604946	protein_coding	Polr3k	utr3	ENSMUSG00000038628	NonProperStrand	2	1	-13.7788
chr6	138547947	138547968	SINE	RSINE1	B4	chr6RSINE1138547881	NonProperStrand	3	chr17	24857780	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	3	-inf
chr3	89354340	89354357	protein_coding	Kcnn3	intron	ENSMUSG00000000794	NonProperStrand	38	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.5179
chr8	112833096	113036797	protein_coding	Hydin	exon	ENSMUSG00000059854	NonProperStrand	42	chr4	131908234	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	7	-15.1361
chr14	15572352	15572371	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr19	6228207	6228225	protein_coding	Ppp2r5b	utr3	ENSMUSG00000024777	ProperStrand	4	1	-16.8880
chr16	18404008	18404582	protein_coding	Arvcf	exon	ENSMUSG00000000325	ProperStrand	28	chr5	108334243	108336491	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-6.3166
chr14	35148503	35148603	protein_coding	Glud1	exon	ENSMUSG00000021794	ProperStrand	72	chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	1	-8.3979
chr9	81949792	81949813	protein_coding	Mei4	intron	ENSMUSG00000043289	NonProperStrand	42	chr1	162966828	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-6.9669
chr4	43505655	43505735	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr17	71990911	71991001	protein_coding	Wdr43	intron	ENSMUSG00000041057	ProperStrand	70	12	-23.7304
chr10	127799396	127799459	protein_coding	Cs	utr3	ENSMUSG00000005683	ProperStrand	63	chr10	60692417	60692433	protein_coding	Adamts14	exon	ENSMUSG00000059901	NonProperStrand	127	1	-11.7103
chr11	116535952	116535982	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr7	111380996	111381040	protein_coding	Trim6	exon	ENSMUSG00000072244	ProperStrand	40	1	-6.7133
chr5	74489202	74489282	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chrX	159207785	159208990	protein_coding	Rbbp7	exon	ENSMUSG00000031353	ProperStrand	48	1	-6.0607
chr11	106362672	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	chr1	145626114	145626194	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-3.1040
chr4	11092172	11092262	protein_coding	Trp53inp1	intron	ENSMUSG00000028211	ProperStrand	35	chr5	145947822	145947902	protein_coding	Atp5j2	intron	ENSMUSG00000038690	ProperStrand	10	1	-18.0352
chr8	109582008	109582024	protein_coding	Nip7	exon	ENSMUSG00000031917	ProperStrand	18	chr18	35716716	35716881	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-10.6484
chr10	17443079	17443097	protein_coding	Cited2	utr5	ENSMUSG00000039910	ProperStrand	64	chr5	121655016	121655095	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.6277
chrX	7118436	7118453	DNA	URR1A	MER1_type	chrXURR1A7118261	ProperStrand	1	chr11	97642990	97643007	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-inf
chrX	159216388	159216463	protein_coding	Rbbp7	utr3	ENSMUSG00000031353	ProperStrand	48	chr5	145564921	145565021	protein_coding	Trrap	exon	ENSMUSG00000045482	ProperStrand	399	1	-9.9674
chr19	4116150	4118089	protein_coding	Aip	exon	ENSMUSG00000024847	ProperStrand	5	chr7	116663651	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-7.4047
chr6	142442650	142444090	protein_coding	Ldhb	exon	ENSMUSG00000030246	ProperStrand	224	chr17	24342579	24342596	protein_coding	Ntn3	utr3	ENSMUSG00000079662	ProperStrand	237	7	-24.5305
chr9	123488130	123491420	protein_coding	Sacm1l	exon	ENSMUSG00000025240	ProperStrand	12	chr17	24857720	24857800	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-5.3067
chrX	100517086	100517102	protein_coding	Cdx4	exon	ENSMUSG00000031326	NonProperStrand	30	chr15	79913288	79913334	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.9112
chr5	148113281	148113297	protein_coding	Cdx2	utr3	ENSMUSG00000029646	ProperStrand	276	chr9	120038554	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-1.5261
chr8	125417829	125419522	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	chr5	121655016	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	3	-2.7379
chr17	45590177	45590199	protein_coding	Spats1	intron	ENSMUSG00000023935	NonProperStrand	9	chr1	162967132	162967178	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	1	-12.5634
chr7	150717397	150717425	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	chr1	172975132	172975189	tRNA	tRNA699-GlyGCC	.	400510	ProperStrand	660	1	-1.2897
chr10	127152705	127152721	protein_coding	Myo1a	exon	ENSMUSG00000025401	ProperStrand	93	chr4	131908355	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.8464
chr4	133097099	133097123	protein_coding	Nudc	exon	ENSMUSG00000028851	ProperStrand	80	chr12	21274407	21274423	protein_coding	Asap2	utr3	ENSMUSG00000052632	ProperStrand	45	1	-13.3173
chr3	44973840	44973860	LINE	L1MC	L1	chr3L1MC44973792	NonProperStrand	4	chr5	130300460	130300550	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	4	-inf
chr11	50641182	50641200	protein_coding	Zfp354c	utr5	ENSMUSG00000044807	ProperStrand	21	chr3	123210914	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.9390
chr11	78331629	78331695	protein_coding	Poldip2	exon	ENSMUSG00000001100	ProperStrand	10	chr7	108971290	108971306	protein_coding	Inppl1	utr3	ENSMUSG00000032737	ProperStrand	272	1	-13.9508
chr5	117092038	117092054	LTR	ORR1B1	MaLR	chr5ORR1B1117091781	NonProperStrand	12	chr15	88650438	88650975	protein_coding	Creld2	exon	ENSMUSG00000023272	ProperStrand	8	1	-19.1875
chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	chr1	92689614	92689630	protein_coding	Col6a3	exon	ENSMUSG00000048126	ProperStrand	79	1	-10.0660
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr17	24869755	24869771	protein_coding	Rpl3l	utr5	ENSMUSG00000002500	NonProperStrand	56	1	-8.8542
chr1	162965981	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	chr5	23358027	23358061	snoRNA	ENSMUSG00000093321_Snord93	.	ENSMUSG00000093321	ProperStrand	218	4	-5.9572
chr10	93498941	93498958	protein_coding	Fgd6	utr5	ENSMUSG00000020021	ProperStrand	15	chr14	52781203	52781256	protein_coding	Supt16h	utr3	ENSMUSG00000035726	ProperStrand	193	1	-13.7962
chr9	107440674	107440762	protein_coding	Tmem115	utr3	ENSMUSG00000010045	ProperStrand	13	chrX	71517910	71517939	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	6	-inf
chr19	38869531	38869547	protein_coding	Noc3l	exon	ENSMUSG00000024999	NonProperStrand	149	chr1	174437371	174437416	protein_coding	Tagln2	utr3	ENSMUSG00000026547	ProperStrand	39	1	-12.3568
chr15	12775882	12775935	protein_coding	Drosha	exon	ENSMUSG00000022191	ProperStrand	163	chr2	35547852	35547868	protein_coding	Dab2ip	utr5	ENSMUSG00000026883	NonProperStrand	58	1	-11.3761
chr17	7505754	7505844	protein_coding	Rps6ka2	utr3	ENSMUSG00000023809	ProperStrand	47	chr3	123210896	123210976	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.4742
chr16	96343365	96343437	protein_coding	Hmgn1	utr3	ENSMUSG00000040681	ProperStrand	38	chr3	68889053	68889143	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-4.1061
chr19	39585387	39585404	protein_coding	Cyp2c39	exon	ENSMUSG00000025003	NonProperStrand	1	chr19	8799831	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-inf
chr11	119136228	119136244	protein_coding	Gaa	exon	ENSMUSG00000025579	NonProperStrand	201	chr11	97643008	97643060	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-0.7306
chr17	34747537	34747555	protein_coding	Agpat1	exon	ENSMUSG00000034254	NonProperStrand	39	chr4	155366536	155366553	protein_coding	B3galt6	exon	ENSMUSG00000050796	ProperStrand	40	1	-14.9922
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr11	68922008	68922593	protein_coding	Per1	exon	ENSMUSG00000020893	ProperStrand	46	1	-8.3272
chr8	112576416	112576432	LINE	L1_Mus3	L1	chr8L1_Mus3112576213	ProperStrand	24	chr7	117189976	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-5.0740
chr19	5869742	5869758	protein_coding	Frmd8	exon	ENSMUSG00000024816	NonProperStrand	1	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-inf
chr14	8725390	8725480	protein_coding	Flnb	exon	ENSMUSG00000025278	ProperStrand	124	chr11	97642994	97643074	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.3336
chr11	81804205	81804295	SINE	B4A	B4	chr11B4A81804225	NonProperStrand	1	chr11	81804037	81804117	Simple_repeat	(CA)n	Simple_repeat	chr11(CA)n81804009	ProperStrand	1	1	-inf
chr7	117189863	117189932	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr9	15118286	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	10	-0.9607
chr15	51794189	51803756	protein_coding	Rad21	exon	ENSMUSG00000022314	ProperStrand	85	chr9	120038553	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-4.2971
chr17	39979939	39979984	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr7	52715006	52715050	protein_coding	Ftl1	utr5	ENSMUSG00000050708	ProperStrand	807	2	-4.1181
chr6	143155026	143155101	protein_coding	Etnk1	utr3	ENSMUSG00000030275	ProperStrand	61	chr11	69481404	69481479	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	3	-8.0291
chr5	138039428	138039465	protein_coding	Mospd3	intron	ENSMUSG00000037221	ProperStrand	2	chr6	80281772	80281791	protein_coding	Lrrtm4	intron	ENSMUSG00000052581	ProperStrand	17	1	-inf
chrX	91435155	91435177	protein_coding	Eif2s3x	utr3	ENSMUSG00000035150	NonProperStrand	83	chr16	23110831	23110933	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-1.3664
chr2	102240809	102240827	protein_coding	Trim44	exon	ENSMUSG00000027189	ProperStrand	26	chr10	80642631	80642655	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-7.7679
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	110769139	110769239	protein_coding	Tmie	utr3	ENSMUSG00000049555	ProperStrand	3	2	-17.9085
chr4	104836469	104836559	protein_coding	Ppap2b	intron	ENSMUSG00000028517	NonProperStrand	3	chr4	104836415	104836505	protein_coding	Ppap2b	intron	ENSMUSG00000028517	ProperStrand	8	1	-20.4785
chr19	8798740	8798763	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	chr17	26360446	26360536	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	1	-1.8701
chr19	4199138	4199157	protein_coding	Rad9	intron	ENSMUSG00000024824	ProperStrand	14	chr9	120038610	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.8314
chr12	110881079	110881115	lincRNA	Rian	intron	ENSMUSG00000091793	ProperStrand	612	chr8	26877676	26877776	protein_coding	Bag4	utr3	ENSMUSG00000037316	ProperStrand	10	1	-12.3278
chrX	140784827	140784865	protein_coding-noncoding	Alg13	utr3	ENSMUSG00000041718	ProperStrand	87	chr15	10504979	10504995	protein_coding	Rai14	exon	ENSMUSG00000022246	ProperStrand	180	2	-16.2932
chr4	115742565	115747536	protein_coding	Uqcrh	exon	ENSMUSG00000063882	ProperStrand	6	chr16	23110985	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.7876
chr5	100465642	100465952	protein_coding	Hnrpdl	exon	ENSMUSG00000029328	ProperStrand	39	chr18	75160709	75160776	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	1	-10.0551
chr11	101439276	101441913	protein_coding	Nbr1	exon	ENSMUSG00000017119	ProperStrand	91	chr4	131865902	131865982	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.1658
chr16	87486748	87487794	protein_coding	Cct8	exon	ENSMUSG00000025613	ProperStrand	65	chr15	34370545	34370623	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-3.4021
chr11	62416619	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	NonProperStrand	13	chr19	8963086	8963182	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	2	-inf
chr17	32166319	32166409	protein_coding	Hsf2bp	intron	ENSMUSG00000002076	NonProperStrand	6	chr17	32166027	32166107	protein_coding	Hsf2bp	intron	ENSMUSG00000002076	ProperStrand	17	1	-19.9795
chrX	102569259	102569275	lincRNA	5330434G04Rik	exon	ENSMUSG00000087620	ProperStrand	29	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-10.0587
chr1	36160503	36160560	protein_coding	Hs6st1	exon	ENSMUSG00000045216	ProperStrand	63	chr11	97643013	97643077	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.3888
chr7	19831457	19831473	protein_coding	Opa3	utr3	ENSMUSG00000052214	ProperStrand	6	chr12	109460710	109460726	protein_coding	Ccdc85c	intron	ENSMUSG00000084883	ProperStrand	157	1	-16.1351
chr17	15894708	15895291	protein_coding	Chd1	exon	ENSMUSG00000023852	ProperStrand	82	chr10	41644311	41644329	protein_coding	Armc2	exon	ENSMUSG00000071324	ProperStrand	281	1	-9.5914
chr8	125626984	125627005	snoRNA	ENSMUSG00000064450_Snord68	.	ENSMUSG00000064450	ProperStrand	181	chr2	158182180	158182279	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-2.9431
chr5	122022832	122023494	protein_coding	Aldh2	exon	ENSMUSG00000029455	ProperStrand	108	chr2	26494762	26494825	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.0962
chr14	71107107	71107195	protein_coding	Xpo7	exon	ENSMUSG00000022100	ProperStrand	109	chr17	35087895	35087946	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-4.0575
chr15	96840550	96840569	protein_coding	Slc38a4	exon	ENSMUSG00000022464	ProperStrand	139	chr10	110918571	110918622	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-1.9936
chr9	20875511	20875549	protein_coding	Fdx1l	intron	ENSMUSG00000079677	ProperStrand	5	chr6	115757992	115758092	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-10.5899
chr1	128107787	128107804	protein_coding	Nckap5	intron	ENSMUSG00000049690	ProperStrand	11	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-8.6239
chr18	74378303	74378397	protein_coding	Cxxc1	exon	ENSMUSG00000024560	NonProperStrand	19	chr10	110918548	110918579	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-5.6609
chr4	144900562	144900581	protein_coding	Tnfrsf8	intron	ENSMUSG00000028602	ProperStrand	7	chr7	52382754	52382832	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-11.1570
chr2	158185527	158185564	lincRNA	9430008C03Rik	exon	ENSMUSG00000085385	ProperStrand	1039	chr8	98269961	98270084	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	4	-3.7653
chr18	33954817	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	chr1	9932574	9932626	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	7	-2.5463
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr1	162965980	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-1.2825
chr4	116230385	116230401	protein_coding	Gpbp1l1	utr5	ENSMUSG00000034042	NonProperStrand	106	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-10.5422
chr3	137849424	137849440	protein_coding	4930579F01Rik	utr5	ENSMUSG00000012042	NonProperStrand	156	chr11	62416601	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-3.3621
chr19	3620255	3622533	protein_coding	Lrp5	exon	ENSMUSG00000024913	ProperStrand	145	chr5	147646768	147646848	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	1	-6.2090
chr9	78023109	78023193	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr5	65779832	65779852	protein_coding	Rpl9	exon	ENSMUSG00000047215	ProperStrand	113	2	-7.7032
chr7	36597873	36597963	LTR	MTA_Mm	MaLR	chr7MTA_Mm36597815	NonProperStrand	1	chr7	36597627	36597707	SINE	B3	B2	chr7B336597618	ProperStrand	1	1	-inf
chr11	121453974	121455621	protein_coding	Tbcd	exon	ENSMUSG00000039230	ProperStrand	34	chr19	12086441	12086495	tRNA	tRNA109-ValTAC	.	659785	ProperStrand	96	1	-13.5165
chr18	42805538	42805554	protein_coding	Ppp2r2b	exon	ENSMUSG00000024500	NonProperStrand	95	chr16	23111776	23111808	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.2241
chrX	42108612	42108634	LINE	Lx2	L1	chrXLx242108559	ProperStrand	1	chr2	26494798	26494825	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-inf
chr8	97971248	97971264	protein_coding	Csnk2a2	utr3	ENSMUSG00000046707	NonProperStrand	10	chr11	120208981	120209041	protein_coding	Actg1	exon	ENSMUSG00000062825	ProperStrand	178	1	-14.7910
chr11	75578668	75578689	protein_coding	Ywhae	utr3	ENSMUSG00000020849	ProperStrand	176	chr5	130300448	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-0.9071
chr17	84162750	84162787	protein_coding	Mta3	intron	ENSMUSG00000055817	ProperStrand	9	chr17	13112513	13112585	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-8.3896
chr10	127152705	127152721	protein_coding	Myo1a	exon	ENSMUSG00000025401	ProperStrand	93	chr5	120646427	120646450	protein_coding	Rbm19	intron	ENSMUSG00000029594	ProperStrand	40	1	-13.2518
chr18	60934326	60936126	protein_coding	Rps14	utr5	ENSMUSG00000024608	ProperStrand	154	chr12	112779229	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-3.0205
chr12	104014395	104014495	protein_coding	Ubr7	utr3	ENSMUSG00000041712	ProperStrand	46	chr1	162967514	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-3.9691
chr7	125329601	125332587	protein_coding	Smg1	exon	ENSMUSG00000030655	ProperStrand	70	chr17	35299561	35299641	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-4.4815
chrX	130496426	130496668	protein_coding	Sytl4	exon	ENSMUSG00000031255	ProperStrand	169	chr18	35714144	35714216	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-1.6837
chr1	52224721	52224740	protein_coding	Gls	intron	ENSMUSG00000026103	NonProperStrand	7	chr10	39978374	39978464	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	NonProperStrand	27	1	-20.1338
chr2	164264746	164264790	protein_coding	Sdc4	intron	ENSMUSG00000017009	ProperStrand	177	chr9	95524997	95525035	snoRNA	ENSMUSG00000065346_SNORA4	.	ENSMUSG00000065346	ProperStrand	142	1	-9.4152
chr2	118611946	118611962	protein_coding	Disp2	exon	ENSMUSG00000040035	NonProperStrand	204	chr12	92811920	92811942	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	1	-6.1432
chr2	34630131	34630153	protein_coding	Hspa5	exon	ENSMUSG00000026864	ProperStrand	181	chr7	52382755	52382802	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	2	-7.6217
chr7	35024104	35024202	protein_coding	4931406P16Rik	exon	ENSMUSG00000066571	ProperStrand	75	chr1	155287312	155287354	snoRNA	ENSMUSG00000064435_SNORA4	.	ENSMUSG00000064435	ProperStrand	263	1	-9.9025
chr4	140121137	140121153	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	chr11	87240282	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	2	-14.7816
chr10	75359822	75360194	protein_coding	Smarcb1	exon	ENSMUSG00000000902	ProperStrand	109	chr11	62416599	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-4.0247
chr11	23187442	23189764	protein_coding	Xpo1	exon	ENSMUSG00000020290	NonProperStrand	8	chr17	35299507	35299633	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	2	-14.2303
chr13	75905621	75905651	protein_coding	Ell2	intron	ENSMUSG00000001542	ProperStrand	110	chr18	35716778	35716877	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.2494
chr1	156572928	156572945	protein_coding	Cacna1e	exon	ENSMUSG00000004110	NonProperStrand	3	chr5	122952055	122952125	protein_coding	Atp2a2	utr5	ENSMUSG00000029467	ProperStrand	166	1	-17.6890
chr15	98356840	98356909	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	chr10	110918550	110918640	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	4	-0.7642
chr8	72322386	72326320	protein_coding	Atp13a1	intron	ENSMUSG00000031862	ProperStrand	75	chr4	131908689	131908893	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	6	-7.7795
chr2	119208673	119209112	protein_coding	Ino80	exon	ENSMUSG00000034154	ProperStrand	54	chr6	115757989	115758044	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	4	-17.1614
chr7	17381296	17381402	protein_coding	Slc1a5	exon	ENSMUSG00000001918	ProperStrand	19	chr7	117190018	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-9.1164
chr15	102768618	102768708	protein_coding	Hoxc12	intron	ENSMUSG00000050328	ProperStrand	7	chr12	60141411	60141491	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	7	-inf
chr5	74489202	74489326	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr1	162968212	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	2	-0.9125
chr2	165914838	165919055	protein_coding	Sulf2	exon	ENSMUSG00000006800	ProperStrand	171	chr11	68887041	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	2	-4.0311
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr17	24857635	24857972	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	1	-2.9059
chr10	84582284	84582300	protein_coding	Mterfd3	utr3	ENSMUSG00000049038	NonProperStrand	13	chr12	17552960	17553047	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-8.1509
chr15	64143850	64143867	protein_coding	Asap1	intron	ENSMUSG00000022377	ProperStrand	29	chr7	104654623	104656261	protein_coding	Ints4	exon	ENSMUSG00000025133	ProperStrand	19	1	-17.1724
chrX	165695583	165695599	protein_coding	Arhgap6	exon	ENSMUSG00000031355	ProperStrand	74	chr15	83630589	83630607	protein_coding	Mpped1	exon	ENSMUSG00000041708	ProperStrand	6	1	-17.5939
chr6	70794802	70794820	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chr5	122580412	122584741	protein_coding	Ccdc63	utr5	ENSMUSG00000043036	ProperStrand	120	1	-10.0302
chr17	6232006	6232022	protein_coding	Tulp4	exon	ENSMUSG00000034377	NonProperStrand	265	chr1	162968442	162968464	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-3.2517
chrX	101017112	101017128	protein_coding	Slc16a2	exon	ENSMUSG00000033965	ProperStrand	35	chr17	39985150	39985172	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-7.0015
chr1	55141425	55141515	protein_coding	Hspd1	exon	ENSMUSG00000025980	ProperStrand	140	chr2	158185576	158185655	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-4.8317
chr14	55195914	55195960	protein_coding	Jub	exon	ENSMUSG00000022178	ProperStrand	25	chr2	32818840	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-7.2088
chr8	87223594	87223612	protein_coding	Trmt1	exon	ENSMUSG00000001909	NonProperStrand	60	chr16	23110512	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-6.5294
chr10	62274762	62342389	protein_coding	Tet1	utr3	ENSMUSG00000047146	ProperStrand	286	chr4	131908687	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	6	-1.3508
chr9	44560457	44560475	protein_coding	Arcn1	intron	ENSMUSG00000032096	ProperStrand	35	chr17	39985561	39985618	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-7.0015
chr8	112196366	112196383	protein_coding	2400003C14Rik	exon	ENSMUSG00000031729	ProperStrand	30	chr11	22735323	22735372	protein_coding	Commd1	utr3	ENSMUSG00000051355	ProperStrand	36	2	-inf
chr19	24169928	24170019	protein_coding	Tjp2	exon	ENSMUSG00000024812	ProperStrand	63	chr16	23110986	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-1.3499
chr4	107596083	107596100	protein_coding	Cpt2	utr5	ENSMUSG00000028607	NonProperStrand	106	chr7	29136525	29136610	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-4.3092
chr9	110842580	110842613	protein_coding	Tdgf1	utr3	ENSMUSG00000032494	ProperStrand	218	chr2	26493409	26493473	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-2.8802
chr18	82662186	82662202	protein_coding	Mbp	intron	ENSMUSG00000041607	NonProperStrand	185	chr3	123210915	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-1.2165
chr6	142705308	142705324	protein_coding	Cmas	exon	ENSMUSG00000030282	NonProperStrand	1	chr16	23110909	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr1	135147552	135147568	protein_coding	Plekha6	intron	ENSMUSG00000041757	NonProperStrand	40	chr2	145076804	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-8.5361
chr11	72261371	72261534	protein_coding	Mybbp1a	exon	ENSMUSG00000040463	ProperStrand	279	chr1	88247786	88247866	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	2	-4.0552
chr11	51459707	51459724	protein_coding	N4bp3	exon	ENSMUSG00000001053	NonProperStrand	41	chr4	131865891	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-6.4005
chr9	100966289	100966307	SINE	B4A	B4	chr9B4A100966214	ProperStrand	51	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-9.6961
chr8	112248141	112248185	protein_coding	Zfp821	exon	ENSMUSG00000031728	ProperStrand	5	chr11	97642952	97642978	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-12.1765
chr18	33954827	33954942	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	chr1	173041632	173041649	tRNA	tRNA710-ValCAC	.	520454	ProperStrand	206	3	-4.2358
chr5	115956842	115983460	protein_coding	Pxn	intron	ENSMUSG00000029528	ProperStrand	171	chr4	131865854	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-2.7647
chr8	119785789	119785852	protein_coding	4933407C03Rik	intron	ENSMUSG00000034390	ProperStrand	48	chr17	36000485	36000501	protein_coding	Nrm	exon	ENSMUSG00000059791	ProperStrand	253	1	-10.8776
chr16	17158961	17158992	protein_coding-noncoding	Ube2l3	utr3	ENSMUSG00000038965	ProperStrand	3	chr7	116664809	116664924	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-14.6076
chr6	28638064	28825008	protein_coding	Snd1	intron	ENSMUSG00000001424	ProperStrand	210	chr7	29136525	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-1.3120
chr8	26857368	26859032	protein_coding	Ddhd2	exon	ENSMUSG00000061313	ProperStrand	5	chr11	69481334	69481424	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-8.1843
chr10	63070812	63070829	protein_coding	Ctnna3	intron	ENSMUSG00000060843	ProperStrand	66	chr16	23111775	23111822	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.7539
chr19	44640265	44640365	protein_coding	Hif1an	intron	ENSMUSG00000036450	ProperStrand	16	chr12	106269284	106269337	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-6.7388
chr9	120038552	120038620	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	NonProperStrand	28	chr7	116663681	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	NonProperStrand	51	1	-15.1799
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr10	23505150	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	10	-0.9660
chr2	71085921	71085937	protein_coding	Dync1i2	exon	ENSMUSG00000027012	NonProperStrand	58	chr6	146499155	146499201	protein_coding	4933424B01Rik	exon	ENSMUSG00000040250	ProperStrand	11	1	-16.8528
chr11	68813759	68813827	protein_coding	Pfas	exon	ENSMUSG00000020899	ProperStrand	53	chr17	79250756	79250787	pseudogene	Gm6548	.	ENSMUSG00000091549	ProperStrand	33	1	-14.7587
chr9	120038472	120038528	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	chr2	26766780	26766803	snoRNA	ENSMUSG00000065258_SNORD24	.	ENSMUSG00000065258	ProperStrand	130	1	-1.7426
chr11	101495144	101495177	protein_coding	Rdm1	exon	ENSMUSG00000010362	ProperStrand	28	chr8	98269962	98270084	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	6	-19.8385
chr17	45706696	45706727	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr4	131399490	131399506	protein_coding	Mecr	exon	ENSMUSG00000028910	NonProperStrand	109	1	-5.5555
chr5	122909509	122910096	protein_coding	Atp2a2	exon	ENSMUSG00000029467	ProperStrand	166	chrX	34622906	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	4	-6.1155
chr10	93563161	93563177	protein_coding	Fgd6	exon	ENSMUSG00000020021	ProperStrand	15	chr17	35299504	35299598	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	2	-12.1527
chrX	11635848	11635865	protein_coding	Bcor	exon	ENSMUSG00000040363	NonProperStrand	293	chr11	6428089	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-0.7687
chr5	34112182	34112206	protein_coding	Letm1	exon	ENSMUSG00000005299	ProperStrand	21	chr9	80204234	80204250	protein_coding	Impg1	intron	ENSMUSG00000032343	ProperStrand	7	1	-21.4650
chr19	5799955	5800035	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr1	141319997	141320087	protein_coding	Zbtb41	exon	ENSMUSG00000033964	ProperStrand	3	2	-inf
chr19	8799015	8799033	lincRNA	Snhg1	exon	ENSMUSG00000090867	ProperStrand	100	chrX	103382576	103387362	protein_coding	Pgk1	utr5	ENSMUSG00000062070	ProperStrand	484	2	-12.9303
chr5	134876359	134876376	protein_coding	Gtf2ird1	intron	ENSMUSG00000023079	NonProperStrand	8	chr3	35984440	35986688	protein_coding	Acad9	exon	ENSMUSG00000027710	ProperStrand	11	1	-18.8752
mmu-miR-1949	6	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr8	47293810	47293857	protein_coding	Slc25a4	exon	ENSMUSG00000031633	ProperStrand	53	1	-8.3974
chr6	67222868	67222922	protein_coding	Serbp1	exon	ENSMUSG00000036371	ProperStrand	261	chrX	149828130	149828146	protein_coding	Klf8	utr3	ENSMUSG00000041649	NonProperStrand	107	1	-9.2059
chr8	108167465	108167508	protein_coding	Ctcf	utr5	ENSMUSG00000005698	ProperStrand	75	chr9	15118566	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	1	-8.8943
chr7	67123693	67123758	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	chr1	162966814	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-2.7077
chr4	155261617	155261720	protein_coding	Cpsf3l	exon	ENSMUSG00000029034	ProperStrand	15	chr2	31924012	31924028	protein_coding	Fam78a	utr3	ENSMUSG00000050592	NonProperStrand	340	2	-19.6416
chr4	118805139	118808418	protein_coding	Slc2a1	exon	ENSMUSG00000028645	ProperStrand	361	chr4	131908236	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	5	-0.6961
chr11	6246517	6246617	protein_coding	Ogdh	exon	ENSMUSG00000020456	ProperStrand	42	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.9630
chr11	46067534	46068067	protein_coding	Cyfip2	exon	ENSMUSG00000020340	ProperStrand	28	chr11	65017827	65017843	protein_coding	Myocd	exon	ENSMUSG00000020542	ProperStrand	5	2	-20.5479
chr13	64254038	64254055	protein_coding	Zfp367	exon	ENSMUSG00000044934	NonProperStrand	6	chr4	53717740	53717784	protein_coding	Fsd1l	utr3	ENSMUSG00000054752	ProperStrand	3	1	-inf
mmu-miR-2137	0	19	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	chr18	35716684	35716762	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-0.9042
chr8	72819016	72819093	protein_coding	Ddx49	intron	ENSMUSG00000057788	ProperStrand	68	chr19	8799831	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-4.7055
chr19	4601681	4601729	protein_coding	Pcx	exon	ENSMUSG00000024892	ProperStrand	70	chr3	68889026	68889125	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	4	-10.3167
chr16	5256015	5256031	protein_coding	Fam86	utr5	ENSMUSG00000022544	ProperStrand	231	chr6	115757991	115758091	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-2.9410
chr1	154486996	154487012	protein_coding	Rgl1	intron	ENSMUSG00000026482	NonProperStrand	12	chr7	116663710	116663762	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-5.5543
chr13	19069019	19069035	protein_coding	Amph	intron	ENSMUSG00000021314	ProperStrand	35	chr1	162965980	162965996	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-4.6236
chr3	85904477	85904567	snoRNA	ENSMUSG00000065847_SNORA32	.	ENSMUSG00000065847	ProperStrand	40	chr16	23110912	23110992	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.7072
chr17	39985361	39985429	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr7	52381719	52381757	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-0.9566
chr3	89158143	89158169	protein_coding	Dcst1	intron	ENSMUSG00000042672	ProperStrand	4	chr2	26494777	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-8.5876
chr4	129687504	129687521	protein_coding	Bai2	exon	ENSMUSG00000028782	ProperStrand	119	chr9	15119647	15119719	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-2.8493
chr2	9986252	9986303	protein_coding	Atp5c1	intron	ENSMUSG00000025781	ProperStrand	138	chr9	120038493	120038583	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-3.0533
chr9	81949791	81949813	protein_coding	Mei4	intron	ENSMUSG00000043289	NonProperStrand	42	chr11	69483136	69483269	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	4	-10.6447
chr11	78214290	78214307	antisense	Gm11194	.	ENSMUSG00000085747	ProperStrand	35	chr5	130295415	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	6	-inf
chr15	99329237	99329253	protein_coding	Faim2	utr3	ENSMUSG00000023011	ProperStrand	45	chr4	134479863	134479969	protein_coding	D4Wsu53e	exon	ENSMUSG00000037266	ProperStrand	15	1	-16.7279
chr10	70509994	70510018	protein_coding	Bicc1	intron	ENSMUSG00000014329	NonProperStrand	13	chr17	24856673	24856753	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-9.5187
chr8	122364297	122364314	protein_coding	Cotl1	utr5	ENSMUSG00000031827	NonProperStrand	5	chr16	23110828	23110882	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr12	106269284	106269543	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	9	-2.5088
chr11	106516382	106528826	protein_coding	Pecam1	utr3	ENSMUSG00000020717	ProperStrand	56	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	2	-11.4502
chr7	148588678	148588778	protein_coding	Taldo1	utr3	ENSMUSG00000025503	ProperStrand	28	chr13	21261553	21261587	tRNA	tRNA999-MetCAT	.	265541	ProperStrand	63	3	-20.3155
chr3	102073299	102073389	LTR	MLT1F	MaLR	chr3MLT1F102073226	ProperStrand	1	chr3	102073508	102073598	LTR	MLT1F1	MaLR	chr3MLT1F1102073491	ProperStrand	1	1	-inf
chr7	104474017	104474115	antisense	Usp35	.	ENSMUSG00000035713	ProperStrand	7	chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	1	-13.6128
chr1	71665183	71665211	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr11	69730589	69730704	protein_coding	Eif5a	utr3	ENSMUSG00000078812	ProperStrand	164	1	-5.8443
chr6	66986487	66986552	protein_coding-noncoding	Gadd45a	utr3	ENSMUSG00000036390	ProperStrand	1	chr16	23110963	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr13	20564016	20564034	protein_coding	Elmo1	intron	ENSMUSG00000041112	NonProperStrand	34	chr12	11098804	11098821	protein_coding	Kcns3	exon	ENSMUSG00000043673	NonProperStrand	7	1	-18.3677
chr9	116018758	116018776	protein_coding	Tgfbr2	exon	ENSMUSG00000032440	ProperStrand	3	chr17	25298496	25298588	protein_coding	Clcn7	utr3	ENSMUSG00000036636	ProperStrand	94	2	-19.5244
chr11	68886928	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	chr18	35714142	35714292	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	72	-inf
chr5	54389948	54389966	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	chr14	76247713	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	3	-5.3577
chr3	130951385	130951415	protein_coding	Hadh	exon	ENSMUSG00000027984	ProperStrand	35	chr4	131865860	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.6607
chr1	167527339	167527429	protein_coding	Mpzl1	intron	ENSMUSG00000026566	ProperStrand	27	chr19	8963030	8963110	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	6	-19.3591
chr9	64563743	64563817	protein_coding	Rab11a	utr3	ENSMUSG00000004771	ProperStrand	27	chr5	130300461	130300551	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.9586
chr3	117540162	117540178	protein_coding	Snx7	exon	ENSMUSG00000028007	ProperStrand	5	chr17	35088970	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	2	-17.4726
chr2	20781526	20781562	protein_coding	Arhgap21	exon	ENSMUSG00000036591	ProperStrand	49	chr1	187066851	187066917	snoRNA	ENSMUSG00000077571_Snora36b	.	ENSMUSG00000077571	ProperStrand	244	2	-17.2531
chr13	48975049	48975149	protein_coding	Fam120a	utr3	ENSMUSG00000038014	ProperStrand	76	chr7	148634786	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-3.5460
chr4	155366536	155366553	protein_coding	B3galt6	exon	ENSMUSG00000050796	ProperStrand	40	chrX	58225380	58225396	pseudogene	Rpl7l1-ps1	.	ENSMUSG00000081323	ProperStrand	46	1	-14.6718
chr2	90235286	90235338	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	143704410	143704427	SINE	ID_B1	B4	chr6ID_B1143704348	NonProperStrand	8	1	-8.5166
chr11	103545150	103547899	protein_coding	Gosr2	exon	ENSMUSG00000020946	ProperStrand	8	chr16	23110550	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-6.3329
chr19	23332023	23332040	protein_coding	Smc5	exon	ENSMUSG00000024943	ProperStrand	146	chr2	145077954	145209253	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-5.9637
chr4	147454583	147454610	protein_coding	Agtrap	utr3	ENSMUSG00000029007	ProperStrand	18	chr11	69483136	69483190	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.6750
chrX	147476948	147476965	SINE	RSINE1	B4	chrXRSINE1147476844	NonProperStrand	20	chr16	23111384	23111447	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.0472
chr6	120702701	120704546	protein_coding	Cecr2	exon	ENSMUSG00000071226	ProperStrand	39	chr6	115758039	115758119	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-6.3206
chr6	121607415	121607500	protein_coding	A2m	exon	ENSMUSG00000030111	ProperStrand	17	chr19	8800361	8800451	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-5.9706
chr1	182509360	182515977	protein_coding	Parp1	exon	ENSMUSG00000026496	ProperStrand	227	chr11	97642978	97643091	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-1.2858
chr7	28289565	28289753	antisense	Gm15541	.	ENSMUSG00000087371	ProperStrand	1	chr18	33954894	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	NonProperStrand	24	1	-inf
mmu-miR-1839-3p	7	23	miRNA	mmu-miR-1839-3p	.	mmu-miR-1839-3p	ProperStrand	2	chr10	86155149	86156155	protein_coding	Hsp90b1	exon	ENSMUSG00000020048	ProperStrand	396	1	-16.9174
chr8	108410314	108410740	protein_coding	Edc4	exon	ENSMUSG00000036270	ProperStrand	34	chr10	23505152	23505218	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.0925
chr11	52181742	52181822	protein_coding	Vdac1	intron	ENSMUSG00000020402	ProperStrand	107	chr6	148881655	148894888	protein_coding	Fam60a	utr5	ENSMUSG00000039985	ProperStrand	68	1	-11.8999
chr5	30092185	30092906	protein_coding	Dnajb6	exon	ENSMUSG00000029131	ProperStrand	81	chr7	117189933	117190014	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.7950
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr7	135148242	135148260	protein_coding	Trim72	exon	ENSMUSG00000042828	ProperStrand	24	1	-12.2829
chr11	63789924	63789958	protein_coding	Cox10	exon	ENSMUSG00000042148	ProperStrand	21	chr8	73115775	73115791	protein_coding	Ell	utr3	ENSMUSG00000070002	NonProperStrand	134	1	-13.8271
chr17	35822057	35822256	protein_coding	Ddr1	exon	ENSMUSG00000003534	ProperStrand	129	chr4	151730301	151730737	protein_coding	Chd5	exon	ENSMUSG00000005045	NonProperStrand	147	1	-9.9784
chr10	41902880	41902960	protein_coding	Foxo3	utr3	ENSMUSG00000048756	ProperStrand	59	chr15	82980102	82980192	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-7.1727
chr4	130299687	130337394	protein_coding	Pum1	utr3	ENSMUSG00000028580	ProperStrand	131	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-3.6170
chr9	78023109	78023245	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr2	158185544	158185673	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	2	-0.8578
chr6	113419923	113419940	protein_coding	Il17re	exon	ENSMUSG00000043088	NonProperStrand	12	chr16	23110830	23110896	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.4686
chr3	119460385	119460468	protein_coding	Ptbp2	intron	ENSMUSG00000028134	ProperStrand	3	chr4	141673026	141673042	protein_coding	Kazn	exon	ENSMUSG00000040606	ProperStrand	123	1	-18.5707
chr19	47712155	47712235	protein_coding	Slk	exon	ENSMUSG00000025060	ProperStrand	27	chr3	68889026	68889116	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-4.7634
chr5	123192146	123192235	protein_coding	Camkk2	exon	ENSMUSG00000029471	ProperStrand	35	chr13	76341035	76341055	protein_coding	Fam81b	intron	ENSMUSG00000078966	NonProperStrand	220	1	-11.7961
chr13	101472053	101472075	protein_coding	Cdk7	utr3	ENSMUSG00000069089	ProperStrand	12	chr11	62418030	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-8.7978
chr8	129468745	129468867	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	chr13	49779671	49779800	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	10	-6.1007
chr4	131908301	131908443	lincRNA	Gm17300	exon	ENSMUSG00000091021	ProperStrand	109	chr11	113762908	113762926	protein_coding	Sdk2	intron	ENSMUSG00000041592	ProperStrand	17	1	-14.6772
chr16	37532932	37532994	protein_coding-noncoding	Gtf2e1	utr3	ENSMUSG00000022828	ProperStrand	1	chr16	37526422	37526484	protein_coding	Gtf2e1	intron	ENSMUSG00000022828	ProperStrand	16	1	-inf
chr3	107499104	107499194	protein_coding	Ahcyl1	exon	ENSMUSG00000027893	ProperStrand	81	chr2	166890780	166890835	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	2	-15.4310
chr11	53519866	53519887	protein_coding	Rad50	intron	ENSMUSG00000020380	ProperStrand	61	chr11	98878344	98878411	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-6.2520
chr12	74385883	74385919	protein_coding	Trmt5	exon	ENSMUSG00000034442	ProperStrand	4	chr4	131908233	131908319	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-6.5415
chr12	117787710	117787726	protein_coding	Ptprn2	intron	ENSMUSG00000056553	NonProperStrand	38	chr9	15118322	15118356	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-4.3239
chr7	4703423	4703513	protein_coding	Cox6b2	utr3	ENSMUSG00000051811	ProperStrand	4	chr3	123210886	123210966	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-7.3786
chr17	50872537	50872553	protein_coding	Tbc1d5	utr3	ENSMUSG00000023923	NonProperStrand	51	chr11	106362644	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-7.7290
chr5	149860322	149860422	protein_coding	Hmgb1	exon	ENSMUSG00000066551	ProperStrand	99	chr10	23505152	23505215	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-1.3434
chr15	48623472	48623489	protein_coding	Csmd3	utr5	ENSMUSG00000022311	ProperStrand	23	chr7	29136526	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.1043
chr1	173210283	173210320	protein_coding	Ppox	exon	ENSMUSG00000062729	ProperStrand	3	chr16	23110829	23110919	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr8	96576064	96578523	protein_coding	Ogfod1	exon	ENSMUSG00000033009	ProperStrand	18	chr16	23110913	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-3.3354
chr13	6579065	6579155	protein_coding	Pitrm1	utr3	ENSMUSG00000021193	ProperStrand	28	chr1	129271856	129271936	protein_coding	Mgat5	intron	ENSMUSG00000036155	ProperStrand	33	1	-16.0347
chr19	59534008	59534026	protein_coding	Emx2	exon	ENSMUSG00000043969	NonProperStrand	87	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-7.0002
chr4	41137849	41137949	protein_coding	Ube2r2	utr3	ENSMUSG00000036241	ProperStrand	19	chr1	162967512	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-5.6883
chr7	26472435	26472451	protein_coding	Tgfb1	utr5	ENSMUSG00000002603	NonProperStrand	154	chr11	62418014	62418070	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-3.7557
chr4	117811168	117811476	protein_coding	Kdm4a	exon	ENSMUSG00000033326	ProperStrand	81	chr9	15119632	15119696	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.1235
chr17	38290745	38290764	LTR	MurERV4-int	ERVK	chr17MurERV4-int38290059	ProperStrand	21	chr2	48760556	48760572	protein_coding	Orc4	utr3	ENSMUSG00000026761	ProperStrand	95	1	-14.5171
chr5	108334223	108336491	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	chr16	32243795	32243830	snoRNA	ENSMUSG00000080440_SNORA79	.	ENSMUSG00000080440	ProperStrand	140	4	-10.9350
chr9	64023999	64024785	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	chr2	32818888	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-1.3783
chr1	182516037	182517407	protein_coding	Parp1	exon	ENSMUSG00000026496	ProperStrand	227	chr16	23110456	23110584	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	9	-10.8128
chr4	91977512	91977602	LINE	L1_Mus2	L1	chr4L1_Mus291976496	NonProperStrand	1	chr9	56366020	56366100	LINE	L1_Mus1	L1	chr9L1_Mus156365823	NonProperStrand	1	1	-inf
chr15	77949855	77949872	protein_coding	Cacng2	utr5	ENSMUSG00000019146	ProperStrand	11	chr12	72411179	72411196	protein_coding	Dact1	exon	ENSMUSG00000044548	ProperStrand	11	1	-19.3304
chr1	52242688	52242707	protein_coding	Gls	utr3	ENSMUSG00000026103	ProperStrand	56	chr7	29136532	29136622	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	6	-14.4162
chr1	133252371	133252451	protein_coding	Srgap2	intron	ENSMUSG00000026425	ProperStrand	299	chr1	20806821	20807374	protein_coding	Mcm3	exon	ENSMUSG00000041859	ProperStrand	142	5	-21.9278
chr14	76247937	76247957	protein_coding	Tpt1	utr3	ENSMUSG00000060126	ProperStrand	236	chr13	49779707	49779802	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	2	-7.2362
chr7	13516174	13516196	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr16	23109050	23109093	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	3	-7.3007
chr6	85909245	85911479	protein_coding	Dusp11	exon	ENSMUSG00000030002	ProperStrand	37	chr13	49779671	49779745	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	4	-19.5301
chr13	15918454	15918470	LTR	MLT1A0	MaLR	chr13MLT1A015918367	NonProperStrand	1	chr9	120039583	120039683	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-inf
chr10	53032355	53032371	protein_coding	Gm9766	exon	ENSMUSG00000038594	ProperStrand	3	chr6	38000525	38000629	protein_coding	Atp6v0a4	exon	ENSMUSG00000038600	ProperStrand	14	1	-inf
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr12	27155100	27155118	protein_coding	Cmpk2	intron	ENSMUSG00000020638	ProperStrand	1	1	-inf
chr12	99497602	99497618	protein_coding	Galc	utr5	ENSMUSG00000021003	NonProperStrand	65	chr19	8799022	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-5.6755
chr15	98350212	98350302	protein_coding	2310037I24Rik	intron	ENSMUSG00000022992	ProperStrand	91	chr16	23111706	23111758	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.2830
chr16	38025491	38025581	DNA	URR1B	MER1_type	chr16URR1B38025410	ProperStrand	1	chr16	38025131	38025221	LINE	Lx	L1	chr16Lx38023333	ProperStrand	1	1	-inf
chr1	167522853	167522927	protein_coding	Mpzl1	utr3	ENSMUSG00000026566	ProperStrand	27	chr3	123210892	123210982	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.4658
chr8	89367092	89367140	protein_coding	N4bp1	utr3	ENSMUSG00000031652	ProperStrand	98	chr6	122267813	122267840	protein_coding	Phc1	utr3	ENSMUSG00000040669	ProperStrand	158	1	-10.3845
chr17	39985564	39985653	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr17	13115690	13115770	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	2	-1.8551
chr15	44979522	44979602	LINE	Lx	L1	chr15Lx44979517	NonProperStrand	1	chr6	21846847	21846937	LINE	Lx	L1	chr6Lx21846549	NonProperStrand	1	1	-inf
chr6	81992905	81992922	protein_coding	Fam176a	intron	ENSMUSG00000035104	ProperStrand	64	chr19	8963028	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.1678
chr6	64088282	64088301	protein_coding	Grid2	intron	ENSMUSG00000071424	NonProperStrand	76	chr1	162967514	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-3.0456
chr2	25563070	25563086	antisense	A230005M16Rik	.	ENSMUSG00000087612	ProperStrand	103	chr5	121655031	121655051	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.7697
chr5	19772056	19772073	protein_coding	Magi2	intron	ENSMUSG00000040003	NonProperStrand	24	chr11	106362641	106362693	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-9.2486
chr7	50968531	50968551	protein_coding	Klk13	intron	ENSMUSG00000054046	ProperStrand	5	chr7	52378398	52378421	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	1	-13.6678
chr9	120039247	120039289	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	chr1	66521957	66521973	protein_coding	Unc80	intron	ENSMUSG00000055567	NonProperStrand	212	1	-7.0076
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr9	22136752	22136811	protein_coding	Anln	utr3	ENSMUSG00000036777	ProperStrand	133	1	-5.4610
chr19	52115597	52115687	LINE	Lx	L1	chr19Lx52115043	ProperStrand	1	chr3	73425267	73425347	LINE	L1_Mus1	L1	chr3L1_Mus173425044	ProperStrand	1	1	-inf
chr6	119521623	119521639	protein_coding	Erc1	utr3	ENSMUSG00000030172	ProperStrand	69	chr11	109334394	109334464	protein_coding	Slc16a6	utr5	ENSMUSG00000041920	ProperStrand	15	1	-15.8346
chr5	119178182	119178272	protein_coding	Med13l	exon	ENSMUSG00000018076	ProperStrand	226	chr11	6520358	6520438	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	2	-8.3941
chr1	120579995	120580049	protein_coding	Tfcp2l1	utr3	ENSMUSG00000026380	ProperStrand	158	chr18	35714187	35714288	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-1.7868
chr13	76029493	76029509	protein_coding	Rhobtb3	intron	ENSMUSG00000021589	ProperStrand	4	chr16	23111447	23111505	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-6.3168
chrX	71553142	71553496	protein_coding	Gdi1	exon	ENSMUSG00000015291	ProperStrand	24	chr4	131865435	131865459	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	4	-17.8500
chr9	64143771	64143871	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	chr18	33954843	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	8	-3.4511
chr5	140925162	140925242	LINE	Lx4A	L1	chr5Lx4A140925053	NonProperStrand	1	chr2	154264183	154264273	protein_coding	Cbfa2t2	intron	ENSMUSG00000038533	NonProperStrand	4	1	-inf
chr12	81322478	81322577	protein_coding	Actn1	intron	ENSMUSG00000015143	ProperStrand	128	chr5	134790403	134790421	protein_coding	Gtf2i	utr5	ENSMUSG00000060261	ProperStrand	41	3	-inf
chr9	40028998	40029051	LINE	L1M5	L1	chr9L1M540028907	ProperStrand	1	chr17	24857740	24857830	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-inf
chr11	98579253	98579343	protein_coding	Med24	exon	ENSMUSG00000017210	ProperStrand	28	chr8	32260341	32260421	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-6.1217
chr18	35716697	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	chr1	39605591	39605699	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	12	-1.0048
chr6	54839998	54840063	protein_coding	Znrf2	utr3	ENSMUSG00000058446	ProperStrand	13	chr7	117190029	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-10.3145
chr11	48616666	48616706	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	chr2	26768391	26768414	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-1.9851
chr9	120483247	120483341	protein_coding	Rpl14	exon	ENSMUSG00000025794	ProperStrand	123	chr15	5068429	5068480	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	7	-inf
chr14	88439913	88440003	LTR	IAPEz-int	ERVK	chr14IAPEz-int88433878	NonProperStrand	1	chr14	80261837	80261917	lincRNA	Gm6999	intron	ENSMUSG00000075495	ProperStrand	265	1	-inf
chr3	30813462	30815530	protein_coding	Phc3	exon	ENSMUSG00000037652	NonProperStrand	4	chr14	76247749	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	3	-19.6872
chr1	66761174	66761264	protein_coding	Rpe	exon	ENSMUSG00000026005	ProperStrand	18	chr18	35716685	35716765	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.3552
chr15	79363981	79364052	protein_coding	Ddx17	intron	ENSMUSG00000055065	ProperStrand	140	chr15	34370549	34370649	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-2.0704
chr16	5014702	5014762	protein_coding	Glyr1	utr3	ENSMUSG00000022536	ProperStrand	60	chr1	63225632	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-6.6681
chr2	90235314	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	42311161	42311179	protein_coding	Ostm1	intron	ENSMUSG00000038280	ProperStrand	14	1	-7.3487
chr1	93743979	93743995	protein_coding	Twist2	utr3	ENSMUSG00000007805	ProperStrand	21	chr16	23110959	23110980	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.5481
chr6	119901747	119987396	protein_coding	Wnk1	exon	ENSMUSG00000045962	ProperStrand	221	chr15	79913288	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-2.6552
chr17	39979972	39979994	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr4	131866608	131866676	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	1	-3.1881
chr11	116535468	116535531	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr8	26830671	26831072	protein_coding	Ppapdc1b	exon	ENSMUSG00000031570	ProperStrand	5	5	-inf
chr19	36189750	36189768	protein_coding	Ankrd1	exon	ENSMUSG00000024803	ProperStrand	11	chr10	43198946	43198994	protein_coding	Bend3	utr5	ENSMUSG00000038214	ProperStrand	27	1	-18.1357
chr16	49069583	49069599	protein_coding	Myh15	exon	ENSMUSG00000092009	ProperStrand	9	chr15	98356818	98356913	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	1	-11.6318
chr9	30970995	30972153	protein_coding	Aplp2	exon	ENSMUSG00000031996	ProperStrand	172	chr11	105308860	105308876	protein_coding	March10	intron	ENSMUSG00000078627	NonProperStrand	3	1	-17.7048
chr8	87230667	87230683	protein_coding	Nfix	utr3	ENSMUSG00000001911	ProperStrand	12	chr9	65044377	65044422	snRNA	ENSMUSG00000075763_U5	.	ENSMUSG00000075763	ProperStrand	216	1	-14.0268
chr2	22826647	22826711	protein_coding	Abi1	exon	ENSMUSG00000058835	ProperStrand	24	chr16	23110491	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.1305
mmu-miR-3963	3	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr7	140855061	140855118	protein_coding	2700050L05Rik	utr3	ENSMUSG00000039990	ProperStrand	14	1	-9.3063
chr15	101120860	101120897	protein_coding	9430023L20Rik	exon	ENSMUSG00000037204	ProperStrand	11	chr4	131865913	131865986	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.8470
chr2	90235295	90235346	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	58108077	58108141	protein_coding	Stoml1	exon	ENSMUSG00000032333	ProperStrand	9	3	-19.6206
chr5	145890825	145890858	protein_coding	Pdap1	utr3	ENSMUSG00000029623	ProperStrand	112	chr14	76247708	76247754	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-5.2133
chr2	154357028	154357084	protein_coding	Cbfa2t2	exon	ENSMUSG00000038533	ProperStrand	99	chr16	23111374	23111464	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-2.3312
chr11	62416575	62416596	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr5	125866368	125866458	protein_coding	Ubc	utr3	ENSMUSG00000008348	ProperStrand	13	7	-19.5139
chrX	20256757	20256813	protein_coding	Uba1	exon	ENSMUSG00000001924	ProperStrand	156	chr2	166890556	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	2	-9.2482
chr17	24857750	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	chr10	30530987	30531020	tRNA	tRNA81-GluCTC	.	433819	ProperStrand	154	2	-1.8335
chr2	30008725	30008745	LINE	L1M2	L1	chr2L1M230008578	ProperStrand	3	chr10	23505152	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-inf
chr5	123271230	123271246	protein_coding	Anapc5	utr5	ENSMUSG00000029472	ProperStrand	92	chr16	90788435	90789205	protein_coding	Urb1	exon	ENSMUSG00000039929	ProperStrand	71	1	-12.1167
chr8	109188256	109188296	protein_coding	Cdh1	exon	ENSMUSG00000000303	ProperStrand	283	chr7	4698505	4698615	protein_coding	Suv420h2	utr3	ENSMUSG00000059851	ProperStrand	60	3	-20.5253
chr10	42298355	42298372	protein_coding	Nr2e1	intron	ENSMUSG00000019803	ProperStrand	32	chr7	116663633	116663691	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.6411
chr10	127021391	127021409	protein_coding	Lrp1	exon	ENSMUSG00000040249	ProperStrand	151	chr5	74489563	74489597	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-2.1491
chr7	130255674	130255697	LINE	L1MB7	L1	chr7L1MB7130254785	ProperStrand	2	chr5	108336369	108336469	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-12.2768
chr14	33005093	33005232	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	chr3	88497854	88497984	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	7	-3.1295
chr9	64333076	64333098	protein_coding	Megf11	intron	ENSMUSG00000036466	NonProperStrand	64	chr11	62416575	62416621	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-5.0411
chr2	179992143	179992359	protein_coding	Rps21	utr5	ENSMUSG00000039001	ProperStrand	46	chr16	23111373	23111463	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-6.6808
chr3	33424472	33424489	LTR	RLTR20B3	ERVK	chr3RLTR20B333424062	ProperStrand	3	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-9.8232
chr1	162138541	162138569	protein_coding	Cacybp	exon	ENSMUSG00000014226	ProperStrand	39	chr17	24857718	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	13	-19.0595
chr6	131326079	131326154	protein_coding	Csda	exon	ENSMUSG00000030189	ProperStrand	86	chr2	32818804	32818894	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-4.7729
chr6	91037894	91037949	protein_coding	Nup210	exon	ENSMUSG00000030091	ProperStrand	140	chr18	13056777	13056794	protein_coding	Osbpl1a	exon	ENSMUSG00000044252	ProperStrand	39	2	-18.5964
chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr1	63225577	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	22	-10.4417
chr3	55987230	55987247	protein_coding	Nbea	utr5	ENSMUSG00000027799	NonProperStrand	115	chr5	123809086	123809154	protein_coding	Bcl7a	utr3	ENSMUSG00000029438	ProperStrand	27	2	-18.9313
chr2	26493385	26493485	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr1	187066850	187066919	snoRNA	ENSMUSG00000077571_Snora36b	.	ENSMUSG00000077571	ProperStrand	244	1	-1.3839
chr15	39673474	39673491	protein_coding	Dpys	exon	ENSMUSG00000022304	ProperStrand	27	chr17	35089195	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-7.0686
chr16	58671016	58671034	protein_coding	Cpox	exon	ENSMUSG00000022742	ProperStrand	7	chr5	68022807	68038940	protein_coding	Atp8a1	exon	ENSMUSG00000037685	ProperStrand	20	1	-19.1455
chr1	173433176	173433256	protein_coding	B930036N10Rik	utr3	ENSMUSG00000091993	ProperStrand	150	chr18	35716789	35716879	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-0.8561
chr17	68131392	68131482	protein_coding	Lama1	exon	ENSMUSG00000032796	ProperStrand	168	chr4	131865411	131865491	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-2.1714
chr12	88458349	88458376	protein_coding	Pomt2	exon	ENSMUSG00000034126	ProperStrand	15	chr9	15119968	15120040	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	2	-15.9789
chr17	66468410	66468427	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	chr5	115707131	115710202	protein_coding	Rnf10	exon	ENSMUSG00000041740	ProperStrand	95	2	-14.1693
chr6	126075509	126075526	protein_coding	Ntf3	intron	ENSMUSG00000049107	NonProperStrand	38	chr5	108336363	108336406	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-5.7729
chrX	70957792	70960139	protein_coding	Bcap31	exon	ENSMUSG00000002015	ProperStrand	21	chr10	23505152	23505215	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.9252
chr4	86232407	86232487	snoRNA	ENSMUSG00000088958_Scarna8	.	ENSMUSG00000088958	ProperStrand	366	chr18	33954852	33954942	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-1.4802
chr7	13615708	13615854	protein_coding	Trim28	exon	ENSMUSG00000005566	ProperStrand	296	chr9	63868722	63868738	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	2	-8.8839
chr2	72323319	72323784	protein_coding	Cdca7	exon	ENSMUSG00000055612	ProperStrand	22	chr10	23505152	23505231	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-7.4556
chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	2	-1.9752
chr6	122678392	122678492	protein_coding	Slc2a3	utr3	ENSMUSG00000003153	ProperStrand	682	chr1	88247743	88247766	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-0.9705
chr5	151359772	151359802	protein_coding	Brca2	exon	ENSMUSG00000041147	ProperStrand	75	chr15	98350146	98350268	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	6	-19.9723
chr7	125306727	125306814	protein_coding	Smg1	exon	ENSMUSG00000030655	ProperStrand	70	chr1	162967141	162967178	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	1	-8.3708
chr8	73201938	73201992	protein_coding	Lsm4	exon	ENSMUSG00000031848	ProperStrand	19	chr18	12172461	12172477	protein_coding	6030446N20Rik	intron	ENSMUSG00000049411	ProperStrand	235	1	-12.9103
chr11	75281814	75281831	protein_coding	Tlcd2	exon	ENSMUSG00000038217	ProperStrand	23	chr18	35716818	35716865	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.8840
chr17	31347400	31347430	protein_coding	Ubash3a	intron	ENSMUSG00000042345	NonProperStrand	4	chr19	8800354	8800460	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	4	-inf
chr3	87719745	87719806	protein_coding	Hdgf	utr3	ENSMUSG00000004897	ProperStrand	117	chr11	68886941	68887033	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-2.9182
chr9	89988631	89989193	protein_coding	Morf4l1	exon	ENSMUSG00000062270	ProperStrand	33	chr2	130101985	130102085	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-6.5360
chr11	5768786	5768802	protein_coding	Aebp1	exon	ENSMUSG00000020473	ProperStrand	4	chr15	34370583	34370664	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-9.0741
chr13	97562582	97562639	LINE	Lx9	L1	chr13Lx997561997	NonProperStrand	2	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-inf
chr8	108743876	108743966	protein_coding	Prmt7	exon	ENSMUSG00000060098	ProperStrand	43	chr5	115939528	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-8.5331
chr8	26677438	26677528	protein_coding-noncoding	Fgfr1	utr5	ENSMUSG00000031565	ProperStrand	2	chr10	90581059	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-12.1998
chr6	124691242	124691296	protein_coding	Grcc10	utr5	ENSMUSG00000072772	ProperStrand	88	chr1	39605604	39605694	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-6.5838
chr10	90581033	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	chr11	77995202	77995224	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	12	-6.5351
chr18	84728254	84728270	protein_coding	Zfp407	exon	ENSMUSG00000048410	ProperStrand	34	chr15	79913288	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.6681
chr4	137214103	137214193	protein_coding	Usp48	utr3	ENSMUSG00000043411	ProperStrand	135	chr11	69481347	69481427	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-1.8237
chr15	99329179	99329195	protein_coding	Faim2	utr3	ENSMUSG00000023011	ProperStrand	45	chr10	23505152	23505218	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-3.0673
chr13	76156115	76156132	protein_coding	Rfesd	utr5	ENSMUSG00000043190	ProperStrand	30	chr16	23110827	23110872	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0481
chr5	67796671	67796728	protein_coding	Bend4	exon	ENSMUSG00000092060	ProperStrand	56	chr7	29136527	29136617	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.4821
chr5	120889875	120889892	protein_coding	Lhx5	intron	ENSMUSG00000029595	NonProperStrand	106	chr7	52382754	52382834	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-5.6315
chr19	41986462	41986480	protein_coding	Pgam1	utr5	ENSMUSG00000011752	ProperStrand	124	chr10	80644040	80644140	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	2	-7.7600
chr8	125019656	125019685	protein_coding	Fam38a	exon	ENSMUSG00000014444	ProperStrand	132	chr11	62418045	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-4.0432
chr4	154529448	154529487	protein_coding	Ski	utr3	ENSMUSG00000029050	ProperStrand	28	chr10	23505180	23505270	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.4185
chr7	116674908	116674926	protein_coding	St5	intron	ENSMUSG00000031024	ProperStrand	42	chr2	144087414	144087463	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-7.2552
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr5	115722583	115722623	protein_coding	Rnf10	utr5	ENSMUSG00000041740	ProperStrand	95	1	-7.0594
chr2	119851031	119851085	protein_coding	Mapkbp1	utr3	ENSMUSG00000033902	ProperStrand	6	chr19	8963032	8963048	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-14.9133
chr6	48389426	48389445	protein_coding	Zfp467	exon	ENSMUSG00000068551	NonProperStrand	1	chr10	23505579	23505626	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-inf
chr2	30112119	30112209	protein_coding	Lrrc8a	exon	ENSMUSG00000007476	ProperStrand	17	chr4	131908717	131908797	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.3002
chr8	71347634	71347741	protein_coding	Ints10	intron	ENSMUSG00000031864	ProperStrand	28	chr5	122311315	122311331	protein_coding	Cux2	exon	ENSMUSG00000042589	ProperStrand	8	1	-18.2452
chr7	26416736	26416757	protein_coding	Bckdha	exon	ENSMUSG00000060376	ProperStrand	14	chr4	131908689	131908748	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.6665
chr11	97695416	97695472	protein_coding	Lasp1	exon	ENSMUSG00000038366	ProperStrand	65	chr8	23179931	23179949	protein_coding	Alg11	utr3	ENSMUSG00000063362	ProperStrand	5	1	-18.0233
chr8	60015584	60016968	protein_coding	Galnt7	exon	ENSMUSG00000031608	ProperStrand	12	chr16	23111770	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.8390
chr11	102060738	102060754	protein_coding	Hdac5	exon	ENSMUSG00000008855	NonProperStrand	39	chr1	155094500	155094558	protein_coding	Lamc1	exon	ENSMUSG00000026478	ProperStrand	239	1	-11.4109
chr7	109789611	109789627	protein_coding	Olfr554	exon	ENSMUSG00000073971	NonProperStrand	66	chr17	35089182	35089226	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-5.2993
chr8	124927059	124936950	protein_coding	Zc3h18	exon	ENSMUSG00000017478	ProperStrand	55	chr18	35716703	35716883	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	13	-19.9689
chr13	49300631	49300658	protein_coding	1110007C09Rik	utr5	ENSMUSG00000037960	ProperStrand	5	chr9	15119358	15119426	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-10.2148
chr12	57633743	57633843	protein_coding	Nkx2-1	utr3	ENSMUSG00000001496	NonProperStrand	5	chr10	62061566	62061595	protein_coding	Ddx21	exon	ENSMUSG00000020075	NonProperStrand	1	1	-inf
chr8	54689161	54689251	protein_coding	Neil3	intron	ENSMUSG00000039396	NonProperStrand	1	chr8	54677764	54677854	protein_coding	Neil3	intron	ENSMUSG00000039396	ProperStrand	14	1	-inf
chr1	55146011	55147582	protein_coding	Hspe1	exon	ENSMUSG00000073676	ProperStrand	31	chr11	62418014	62418036	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-6.8646
chr7	19818280	19818380	protein_coding	Opa3	intron	ENSMUSG00000052214	ProperStrand	6	chr10	23505152	23505218	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-5.3874
chr9	103945063	103945079	protein_coding	Nphp3	utr3	ENSMUSG00000032558	NonProperStrand	5	chr10	23506325	23506347	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-12.0954
chr6	89270724	89270866	protein_coding	Plxna1	exon	ENSMUSG00000030084	ProperStrand	233	chr10	80641608	80641896	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-3.5040
chr9	61761257	61761288	protein_coding	Rplp1	exon	ENSMUSG00000007892	ProperStrand	116	chr17	30772308	30772324	protein_coding	Dnahc8	utr5	ENSMUSG00000033826	ProperStrand	246	1	-9.1624
chr6	83999446	83999466	protein_coding	Dysf	intron	ENSMUSG00000033788	ProperStrand	26	chr16	11144150	11144250	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	1	-12.1517
chr4	53046062	53046136	protein_coding	Abca1	utr3	ENSMUSG00000015243	ProperStrand	15	chr4	123188413	123188440	protein_coding	Macf1	exon	ENSMUSG00000028649	ProperStrand	320	1	-12.7779
chr1	183747395	183747508	protein_coding	Lbr	exon	ENSMUSG00000004880	ProperStrand	97	chr1	52864576	52864593	protein_coding	Inpp1	intron	ENSMUSG00000026102	NonProperStrand	3	1	-19.1544
chr3	129692618	129692702	protein_coding	Sec24b	exon	ENSMUSG00000001052	ProperStrand	26	chr5	130295417	130295507	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	2	-11.1555
chr18	38362551	38362620	protein_coding	Pcdh1	exon	ENSMUSG00000051375	ProperStrand	19	chr17	23687227	23687264	tRNA	tRNA994-ArgCCG	.	295617	ProperStrand	60	3	-21.1514
chr5	137963430	137963674	protein_coding	Gigyf1	exon	ENSMUSG00000029714	ProperStrand	49	chr4	131908265	131908345	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.7204
chrX	98604632	98604975	protein_coding	Zmym3	exon	ENSMUSG00000031310	NonProperStrand	2	chr8	73419657	73419773	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-10.3981
chr8	47296314	47296360	protein_coding	Slc25a4	utr5	ENSMUSG00000031633	ProperStrand	53	chr17	35089181	35089234	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-5.7282
chr11	83776047	83776104	protein_coding	Ddx52	utr3	ENSMUSG00000020677	ProperStrand	9	chr11	83107812	83107903	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	4	-inf
chr9	15118245	15118381	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	chr2	26494706	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	54	-1.3627
chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	chr5	108336363	108336490	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	4	-6.3946
chr14	31386639	31386786	protein_coding	Tkt	utr3	ENSMUSG00000021957	ProperStrand	160	chr4	131866155	131866252	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	25	-20.1279
chr2	167974116	167974134	lincRNA	Gm14235	intron	ENSMUSG00000085267	NonProperStrand	1	chr5	130300507	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-inf
chr10	24975070	24975086	protein_coding	Akap7	intron	ENSMUSG00000039166	ProperStrand	11	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-10.6842
chr18	63109676	63109692	protein_coding	Apcdd1	exon	ENSMUSG00000071847	NonProperStrand	254	chr11	48670541	48670560	tRNA	tRNA2021-LeuAAG	.	1789843	ProperStrand	13	1	-13.5363
chr4	43505657	43505721	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr1	182867882	182867941	protein_coding	Lefty1	exon	ENSMUSG00000038793	ProperStrand	28	3	-10.8448
chr15	79913288	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr16	66842819	66842835	protein_coding	Cadm2	intron	ENSMUSG00000064115	NonProperStrand	21	1	-5.6139
chr8	72588894	72588984	protein_coding	Sugp1	exon	ENSMUSG00000011306	ProperStrand	20	chr5	130295415	130295495	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-7.4328
chr12	21397102	21397155	protein_coding	Ywhaq	utr3	ENSMUSG00000076432	ProperStrand	70	chr12	106269284	106269384	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-3.8505
chr7	19666477	19666535	protein_coding	Dmwd	exon	ENSMUSG00000030410	ProperStrand	41	chr9	120038613	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	3	-9.2382
chr8	3642156	3642172	protein_coding	Stxbp2	intron	ENSMUSG00000004626	NonProperStrand	73	chr12	17552959	17552990	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-4.7106
chr13	6547419	6547436	protein_coding	Pitrm1	exon	ENSMUSG00000021193	ProperStrand	28	chr5	122017969	122018012	protein_coding	Aldh2	utr3	ENSMUSG00000029455	ProperStrand	108	1	-13.6739
chr13	9833574	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr4	86502100	86502166	protein_coding	Rps6	exon	ENSMUSG00000028495	ProperStrand	263	1	-2.2591
chr8	37676827	37676952	protein_coding	Dlc1	utr5	ENSMUSG00000031523	ProperStrand	89	chr12	70474308	70474334	protein_coding	Arf6	utr3	ENSMUSG00000044147	ProperStrand	32	3	-inf
chr3	97817679	97902129	protein_coding	Notch2	exon	ENSMUSG00000027878	ProperStrand	86	chr10	23505152	23505269	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-1.6109
chr2	90235294	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	32050469	32054602	protein_coding	Prrc2b	exon	ENSMUSG00000039262	ProperStrand	344	2	-2.7072
chr8	48796851	48796868	protein_coding	Cdkn2aip	exon	ENSMUSG00000038069	NonProperStrand	2	chr15	80042587	80042642	protein_coding	Mgat3	exon	ENSMUSG00000042428	ProperStrand	14	1	-inf
chr5	130295414	130295543	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	chr11	77995187	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	6	-2.3657
chrX	131122541	131122561	protein_coding	Rpl36a	utr3	ENSMUSG00000079435	ProperStrand	53	chr10	39978385	39978485	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-5.7024
chr7	133636260	133636317	protein_coding	Atxn2l	exon	ENSMUSG00000032637	ProperStrand	219	chr11	16404813	16406381	protein_coding	Sec61g	exon	ENSMUSG00000078974	ProperStrand	10	2	-19.9476
chr9	108397443	108397475	protein_coding	Usp19	exon	ENSMUSG00000006676	ProperStrand	57	chr11	77996571	77996605	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-6.1932
chr9	70434986	70436778	protein_coding	Sltm	exon	ENSMUSG00000032212	ProperStrand	13	chr17	47735699	47735789	protein_coding	Ccnd3	utr3	ENSMUSG00000034165	ProperStrand	58	2	-inf
chr2	167836656	167836680	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	chr9	65756911	65756928	protein_coding	Csnk1g1	utr5	ENSMUSG00000032384	ProperStrand	31	2	-19.6167
chr12	60171373	60171432	protein_coding	Pnn	exon	ENSMUSG00000020994	ProperStrand	42	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	3	-10.3186
chr15	81110991	81111009	SINE	ID4	ID	chr15ID481110956	ProperStrand	272	chr8	86514374	86514446	protein_coding	Prkaca	exon	ENSMUSG00000005469	ProperStrand	17	1	-12.8458
chr2	127204583	127204600	SINE	MIRc	MIR	chr2MIRc127204518	NonProperStrand	7	chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	1	-13.3277
chr17	34767794	34767810	protein_coding	Prrt1	exon	ENSMUSG00000015476	ProperStrand	2	chr16	37384897	37384913	protein_coding	Stxbp5l	utr5	ENSMUSG00000022829	ProperStrand	332	1	-17.3925
chr1	102076760	102076820	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	chrX	34622905	34623035	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	6	-4.8170
chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	chr7	52382432	52382462	protein_coding	Rpl13a	exon	ENSMUSG00000074129	ProperStrand	269	1	-6.2882
chr19	5492632	5492650	protein_coding	Cfl1	exon	ENSMUSG00000056201	ProperStrand	88	chr17	35088971	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-5.1204
chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-2.3249
chr4	133243495	133243556	protein_coding	Arid1a	exon	ENSMUSG00000007880	ProperStrand	465	chr9	120038613	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	4	-1.9887
chr16	35279320	35279337	protein_coding	Adcy5	exon	ENSMUSG00000022840	ProperStrand	5	chr11	97642952	97643093	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-7.3581
chr12	3484563	3484580	protein_coding	Asxl2	exon	ENSMUSG00000037486	NonProperStrand	12	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-6.4045
chr2	22445201	22445237	protein_coding	Myo3a	intron	ENSMUSG00000025716	ProperStrand	30	chr10	80644784	80644866	protein_coding	Eef2	utr3	ENSMUSG00000034994	ProperStrand	2244	5	-20.1082
chr1	188562659	188562759	protein_coding-noncoding	Rrp15	utr3	ENSMUSG00000001305	ProperStrand	3	chr16	23109047	23109093	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-13.6377
chr17	32340492	32340532	protein_coding	Brd4	intron	ENSMUSG00000024002	ProperStrand	121	chr16	23111392	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-1.0297
chrX	71517823	71517937	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	chr8	18933070	18933093	snoRNA	ENSMUSG00000088420_SNORA70	.	ENSMUSG00000088420	ProperStrand	12	1	-9.8054
chr13	34436854	34436870	protein_coding	Slc22a23	utr5	ENSMUSG00000038267	ProperStrand	95	chr9	53037341	53042007	protein_coding	Ddx10	exon	ENSMUSG00000053289	ProperStrand	40	1	-13.2094
chr17	21093731	21093814	protein_coding	Ppp2r1a	exon	ENSMUSG00000007564	ProperStrand	57	chr7	28146782	28146798	protein_coding	Spnb4	exon	ENSMUSG00000011751	NonProperStrand	84	1	-12.7418
chr14	36525626	36525705	LINE	L1Md_A	L1	chr14L1Md_A36522337	ProperStrand	1	chr1	24621217	24621307	protein_coding	Gm10925	utr3	ENSMUSG00000090378	ProperStrand	320	1	-inf
chr8	93457587	93457675	protein_coding	Chd9	exon	ENSMUSG00000056608	ProperStrand	35	chr11	62590594	62590631	snoRNA	ENSMUSG00000064692_SNORA67	.	ENSMUSG00000064692	ProperStrand	185	1	-12.1425
chr11	48614367	48614427	snoRNA	ENSMUSG00000064500_SNORD95	.	ENSMUSG00000064500	ProperStrand	100	chr11	68887020	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	3	-8.0629
chr6	51414540	51415191	protein_coding	Hnrnpa2b1	exon	ENSMUSG00000004980	ProperStrand	166	chr18	63908609	63908625	protein_coding	Wdr7	intron	ENSMUSG00000040560	NonProperStrand	180	1	-9.0697
chr4	153410349	153410365	protein_coding	Ccdc27	exon	ENSMUSG00000039492	ProperStrand	94	chr4	131908358	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.8340
chr7	34992644	34992739	protein_coding	Gpi1	exon	ENSMUSG00000036427	ProperStrand	288	chr19	8800356	8800404	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-1.9881
chr8	112387973	112387989	antisense	Gm17344	.	ENSMUSG00000078143	NonProperStrand	100	chr9	40612830	40612920	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	1	-8.5207
chr4	106323865	106323883	protein_coding	Pars2	intron	ENSMUSG00000043572	NonProperStrand	13	chr11	6428121	6428154	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-6.1494
chr2	154363237	154363327	protein_coding	Cbfa2t2	utr3	ENSMUSG00000038533	ProperStrand	99	chr8	73419695	73419775	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.2606
chr19	12793320	12793339	protein_coding	Keg1	exon	ENSMUSG00000024694	ProperStrand	7	chr16	23111694	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.9463
chr9	70243526	70243618	protein_coding	Myo1e	intron	ENSMUSG00000032220	ProperStrand	36	chr4	131865920	131865967	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.6115
chr17	75938033	75938049	protein_coding	Fam98a	exon	ENSMUSG00000002017	ProperStrand	22	chr19	8963117	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.0882
chr18	10792989	10794480	protein_coding	Mib1	exon	ENSMUSG00000024294	ProperStrand	27	chr16	23111374	23111464	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.5132
chr5	93371786	93371808	protein_coding	Shroom3	exon	ENSMUSG00000029381	ProperStrand	52	chr2	26494773	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.3667
chr14	15572352	15572371	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr8	75071970	75071987	protein_coding	Med26	utr5	ENSMUSG00000045248	ProperStrand	45	1	-11.8631
chr13	107770188	107770242	protein_coding-noncoding	Kif2a	utr3	ENSMUSG00000021693	ProperStrand	1	chr5	108333648	108333666	snoRNA	ENSMUSG00000064453_Snord21	.	ENSMUSG00000064453	ProperStrand	201	1	-inf
chr14	66450156	66450197	protein_coding	Esco2	exon	ENSMUSG00000022034	ProperStrand	12	chr16	23110874	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-6.8317
chr15	10499405	10499426	protein_coding	Rai14	utr3	ENSMUSG00000022246	ProperStrand	180	chr16	23110509	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-0.8476
chr19	23332023	23332040	protein_coding	Smc5	exon	ENSMUSG00000024943	ProperStrand	146	chr3	108190269	108190524	protein_coding	Psrc1	exon	ENSMUSG00000068744	ProperStrand	38	1	-12.4509
chr1	184209596	184209649	protein_coding	Degs1	exon	ENSMUSG00000038633	ProperStrand	19	chr16	23110524	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.5826
chr7	20281787	20281887	protein_coding	Apoe	exon	ENSMUSG00000002985	ProperStrand	231	chr1	172669103	172669125	protein_coding	Atf6	intron	ENSMUSG00000026663	ProperStrand	35	1	-11.6988
chr8	87579314	87579451	protein_coding	Tnpo2	utr3	ENSMUSG00000031691	ProperStrand	92	chr1	162966830	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	3	-12.6271
chr17	39980028	39980074	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr11	42440243	42440259	protein_coding	Gabrb2	exon	ENSMUSG00000007653	ProperStrand	248	1	-4.4530
chr17	26072040	26073797	protein_coding	Pigq	exon	ENSMUSG00000025728	ProperStrand	26	chr18	73693111	73693139	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	7	-20.9587
mmu-miR-6240	3	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr19	25484358	25484374	protein_coding	Kank1	exon	ENSMUSG00000032702	ProperStrand	218	1	-3.4432
chr7	36388906	36389233	protein_coding	Ankrd27	exon	ENSMUSG00000034867	ProperStrand	132	chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-6.1774
chr5	120984352	120984406	protein_coding	Tpcn1	utr3	ENSMUSG00000032741	ProperStrand	15	chr7	51505231	51505308	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	1	-10.9640
chr2	92105662	92105742	protein_coding	Phf21a	intron	ENSMUSG00000058318	ProperStrand	25	chr12	106269344	106269434	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-5.8416
chr4	43505836	43505916	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr14	56514501	56514591	protein_coding	Khnyn	utr3	ENSMUSG00000047153	ProperStrand	25	1	-4.7144
chr11	71856746	71856763	protein_coding	Fam64a	exon	ENSMUSG00000020808	NonProperStrand	19	chr8	13416897	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-8.7651
chr12	34122681	34122771	protein_coding	Twistnb	exon	ENSMUSG00000020561	ProperStrand	6	chr9	15119303	15119383	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-9.8106
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr1	72290908	72290987	snRNA	ENSMUSG00000093111_AC120136.1	.	ENSMUSG00000093111	ProperStrand	137	2	-9.1516
chr11	97576994	97577084	protein_coding	Pip4k2b	utr3	ENSMUSG00000018547	ProperStrand	46	chr14	33005095	33005139	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	2	-7.4933
chr2	90235292	90235345	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	8798740	8798816	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	13	-1.2178
chr4	86303218	86303283	protein_coding	Plin2	exon	ENSMUSG00000028494	NonProperStrand	2	chr9	120038550	120038650	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	NonProperStrand	28	1	-20.1779
chr10	127015747	127018824	protein_coding	Lrp1	exon	ENSMUSG00000040249	ProperStrand	151	chr5	44617757	44617773	protein_coding	Tapt1	exon	ENSMUSG00000046985	ProperStrand	5	1	-16.6018
chr7	99890655	99890735	protein_coding	Rab30	intron	ENSMUSG00000030643	ProperStrand	2	chr10	23505152	23505242	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-8.0476
chr15	60661083	60661099	lincRNA	9930014A18Rik	exon	ENSMUSG00000044513	ProperStrand	54	chr4	131908689	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.3702
chr13	64863287	64863304	protein_coding	Cntnap3	exon	ENSMUSG00000033063	ProperStrand	87	chr15	98350140	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	9	-19.2559
chr5	144324219	144324309	protein_coding	2810453I06Rik	exon	ENSMUSG00000048910	ProperStrand	22	chr17	13112470	13112550	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-6.5526
chr5	14226340	14226357	protein_coding-noncoding	Sema3e	utr5	ENSMUSG00000063531	NonProperStrand	11	chr11	69481389	69481432	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-6.5008
chr15	98782014	98782104	protein_coding	Tuba1a	exon	ENSMUSG00000072235	ProperStrand	17	chr16	23111376	23111456	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.3471
chr18	74380211	74380274	protein_coding	Cxxc1	intron	ENSMUSG00000024560	ProperStrand	44	chr11	69481383	69481473	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.7716
chr7	29404721	29404738	protein_coding	C330005M16Rik	intron	ENSMUSG00000037469	ProperStrand	23	chr19	8799581	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-8.6918
chr17	23955821	23955839	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	chr16	23110524	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-2.0959
chr5	89383967	89457318	protein_coding	Slc4a4	exon	ENSMUSG00000060961	NonProperStrand	195	chr7	52382753	52382832	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-4.4565
chr5	125366102	125366182	protein_coding	Zfp664	exon	ENSMUSG00000079215	ProperStrand	47	chr18	35716691	35716781	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.5824
chr7	28133394	28133419	protein_coding	Shkbp1	exon	ENSMUSG00000089832	ProperStrand	7	chr16	23110866	23110956	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-9.3151
chr15	82725614	82725636	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	chr4	131865380	131865467	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	2	-0.9338
chr13	9833549	9833679	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr5	8397886	8397903	protein_coding	Dbf4	exon	ENSMUSG00000002297	ProperStrand	38	2	-9.5443
chr5	23982921	23983021	protein_coding	Agap3	exon	ENSMUSG00000023353	ProperStrand	39	chrX	99445995	99446012	protein_coding	Cited1	utr5	ENSMUSG00000051159	ProperStrand	72	1	-13.8162
chr11	68802604	68802656	protein_coding	Pfas	intron	ENSMUSG00000020899	NonProperStrand	9	chr18	35716810	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-5.7446
chr1	175264622	175264638	protein_coding	Cadm3	utr3	ENSMUSG00000005338	NonProperStrand	3	chr5	45358243	45358262	protein_coding	4930431F12Rik	exon	ENSMUSG00000062496	NonProperStrand	3	1	-inf
chr6	140108145	140108235	SINE	B4A	B4	chr6B4A140108069	NonProperStrand	1	chr6	148997349	148997439	protein_coding	Dennd5b	intron	ENSMUSG00000030313	ProperStrand	7	1	-inf
chr13	9833544	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr7	17007730	17007830	protein_coding	Zc3h4	exon	ENSMUSG00000059273	ProperStrand	95	1	-4.0770
chr1	162968214	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	chr13	49779667	49779746	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-1.1695
chr8	13416895	13416912	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr12	110923175	110923231	snoRNA	ENSMUSG00000084487_SNORD113	.	ENSMUSG00000084487	ProperStrand	183	2	-7.1534
chr13	24565737	24565791	protein_coding	Cmah	utr3	ENSMUSG00000016756	NonProperStrand	53	chr9	15118284	15118374	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-6.2644
chr11	105098484	105098584	protein_coding	Tlk2	intron	ENSMUSG00000020694	ProperStrand	19	chr16	23110909	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-9.4108
chr11	104197639	104197870	protein_coding	1700081L11Rik	exon	ENSMUSG00000018412	ProperStrand	73	chr11	97643021	97643091	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.1433
chr12	17552950	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr8	98269959	98270076	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	9	-2.6643
chr11	47433679	47433698	protein_coding	Sgcd	intron	ENSMUSG00000020354	NonProperStrand	8	chr4	131865855	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.4974
chr4	118933234	118933314	protein_coding	Cldn19	utr3	ENSMUSG00000066058	ProperStrand	1	chr16	23110850	23110940	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr7	151765212	151765228	antisense	Gm10574	.	ENSMUSG00000073778	ProperStrand	357	chr17	7160308	7160432	protein_coding	Tagap1	exon	ENSMUSG00000052031	ProperStrand	1	1	-inf
chr3	108714523	108714585	protein_coding	Prpf38b	utr5	ENSMUSG00000027881	ProperStrand	23	chr14	33005093	33005171	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	5	-18.8904
chr14	71005182	71005236	protein_coding	Epb4.9	intron	ENSMUSG00000022099	ProperStrand	48	chr16	23111468	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.5796
chr4	108278918	108278934	protein_coding	Orc1	exon	ENSMUSG00000028587	ProperStrand	161	chr10	110918591	110918631	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-1.7628
chr7	53666732	53666749	protein_coding	Kcnc1	intron	ENSMUSG00000058975	NonProperStrand	14	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-6.4303
chr12	29316621	29319090	protein_coding	Rps7	exon	ENSMUSG00000061477	ProperStrand	129	chr2	130101259	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	11	-inf
chr4	64860839	64860858	protein_coding	Pappa	intron	ENSMUSG00000028370	ProperStrand	65	chr16	23111372	23111429	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.1508
chr18	35112388	35113899	protein_coding	Hspa9	exon	ENSMUSG00000024359	ProperStrand	166	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	2	-10.6047
chr2	26493391	26493518	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr2	153226014	153226030	protein_coding	Asxl1	exon	ENSMUSG00000042548	NonProperStrand	13	3	-19.6002
chr17	36324407	36324487	protein_coding-noncoding	H2-T3	utr3	ENSMUSG00000054128	ProperStrand	1	chr17	36324285	36324375	protein_coding	H2-T3	exon	ENSMUSG00000054128	ProperStrand	1	1	-inf
chr1	36609590	36609607	protein_coding	Sema4c	exon	ENSMUSG00000026121	NonProperStrand	5	chr11	97643009	97643091	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-7.3581
chr2	63936035	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr17	35299565	35299642	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	4	-2.7955
chr8	125655598	125655678	protein_coding-noncoding	Cpne7	utr5	ENSMUSG00000034796	ProperStrand	1	chr8	125655824	125655915	protein_coding	Cpne7	intron	ENSMUSG00000034796	ProperStrand	4	1	-inf
chr14	55127733	55128155	protein_coding	Prmt5	exon	ENSMUSG00000023110	ProperStrand	72	chr17	35299561	35299641	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-4.4278
chr2	110012657	110012722	protein_coding	Ccdc34	utr3	ENSMUSG00000027160	ProperStrand	4	chr7	90746954	90746970	protein_coding	Tmc3	exon	ENSMUSG00000038540	ProperStrand	10	1	-19.3291
chr8	98270086	98270118	protein_coding	Cnot1	intron	ENSMUSG00000036550	ProperStrand	315	chr8	98269957	98270083	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	7	-16.8015
chrX	156315498	156315519	protein_coding	Sh3kbp1	intron	ENSMUSG00000040990	ProperStrand	67	chr7	116663720	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.3245
chr3	54905098	54905178	LTR	RLTR13D1	ERVK	chr3RLTR13D154904888	NonProperStrand	1	chr19	44787918	44788008	SINE	RSINE1	B4	chr19RSINE144787927	ProperStrand	1	1	-inf
chr12	88488443	88496424	protein_coding	Pomt2	exon	ENSMUSG00000034126	NonProperStrand	331	chr7	52382752	52382832	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-3.4696
chr13	101387723	101387813	protein_coding	Rad17	exon	ENSMUSG00000021635	ProperStrand	8	chr5	74489585	74489665	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-7.7916
chr10	61255017	61255035	LTR	RodERV21-int	ERV1	chr10RodERV21-int61254379	ProperStrand	1	chr7	133939467	133939512	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	1	-inf
chr6	93791458	93791490	protein_coding	Magi1	intron	ENSMUSG00000045095	ProperStrand	106	chr7	117190029	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.3333
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr13	58495722	58495961	protein_coding	Hnrnpk	exon	ENSMUSG00000021546	ProperStrand	117	1	-5.0630
chr12	110881072	110881115	lincRNA	Rian	intron	ENSMUSG00000091793	ProperStrand	612	chr9	15119287	15119376	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	4	-4.9615
chr15	99610282	99610325	protein_coding	Lima1	utr3	ENSMUSG00000023022	ProperStrand	159	chr6	136764635	136764674	protein_coding	Wbp11	exon	ENSMUSG00000030216	ProperStrand	87	2	-16.6651
chr7	128028236	128028950	protein_coding	Eef2k	exon	ENSMUSG00000035064	ProperStrand	27	chr17	24858212	24858570	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	1	-11.2668
chr15	82052774	82052803	protein_coding	Tnfrsf13c	utr3	ENSMUSG00000068105	NonProperStrand	4	chr4	131865856	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.0048
chr2	26316976	26317004	protein_coding	Notch1	intron	ENSMUSG00000026923	NonProperStrand	8	chr1	88247780	88247834	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-9.1768
chr17	47684132	47684149	protein_coding	Ccnd3	intron	ENSMUSG00000034165	NonProperStrand	17	chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	1	-13.1804
chr11	101306546	101306596	protein_coding	Rpl27	exon	ENSMUSG00000063316	ProperStrand	96	chr11	62416600	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	3	-10.2683
chr19	3889053	3889963	protein_coding	Chka	exon	ENSMUSG00000024843	ProperStrand	17	chr9	15118357	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	6	-inf
chr6	113515230	113516857	protein_coding	Fancd2	exon	ENSMUSG00000034023	ProperStrand	65	chr19	8963073	8963153	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.1423
chr7	51503468	51503548	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	chr4	131866177	131866268	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	10	-9.4604
chr8	8618746	8618790	protein_coding	Efnb2	utr3	ENSMUSG00000001300	ProperStrand	9	chr13	68759738	68764669	protein_coding	Adcy2	exon	ENSMUSG00000021536	ProperStrand	237	1	-14.4450
chr3	19528533	19528550	protein_coding	1700064H15Rik	exon	ENSMUSG00000082766	NonProperStrand	78	chr17	35089181	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-4.9753
chr14	56159296	56159314	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	chr2	130103751	130103808	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-6.1235
chr9	30235085	30235102	protein_coding	Snx19	exon	ENSMUSG00000031993	ProperStrand	353	chr9	40612831	40612853	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	1	-6.0247
chr2	181405343	181405359	protein_coding	Sox18	exon	ENSMUSG00000046470	ProperStrand	96	chr14	52694241	52694283	protein_coding	Hnrnpc	utr3	ENSMUSG00000060373	ProperStrand	75	1	-11.9209
chr8	11556766	11556866	protein_coding	Ing1	utr5	ENSMUSG00000045969	ProperStrand	38	chr11	68887039	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	3	-11.8788
chr19	44471261	44471338	protein_coding	Scd1	utr3	ENSMUSG00000037071	ProperStrand	32	chr1	162967540	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.6627
chr13	9833564	9833660	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr7	52381972	52382020	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	3	-0.8112
chr4	46508037	46508113	snoRNA	ENSMUSG00000064410_SNORA36	.	ENSMUSG00000064410	ProperStrand	133	chr17	26360448	26360538	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	1	-8.4352
chr7	149562939	149563029	protein_coding	Ctsd	exon	ENSMUSG00000007891	ProperStrand	60	chr5	130300448	130300528	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.5095
chr11	60599265	60599365	protein_coding	Smcr8	utr3	ENSMUSG00000049323	ProperStrand	46	chr11	116533823	116533893	snoRNA	ENSMUSG00000065640_Snord1c	.	ENSMUSG00000065640	ProperStrand	373	1	-10.1878
chr11	121062270	121062289	protein_coding	1110031I02Rik	exon	ENSMUSG00000025169	NonProperStrand	7	chr7	29136525	29136642	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-6.5022
chr3	144141680	144141697	protein_coding	Hs2st1	intron	ENSMUSG00000040151	NonProperStrand	31	chr11	68886975	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-5.4198
chr4	116741282	116741362	protein_coding-noncoding	Eif2b3	utr5	ENSMUSG00000028683	ProperStrand	6	chr18	33954837	33954927	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	5	-19.3474
chr4	137818054	137818072	protein_coding	Kif17	intron	ENSMUSG00000028758	NonProperStrand	15	chr11	60000854	60000912	protein_coding	Rai1	exon	ENSMUSG00000062115	ProperStrand	25	1	-17.7812
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr12	71347267	71386247	protein_coding	Trim9	intron	ENSMUSG00000021071	NonProperStrand	75	2	-6.7817
chr7	3296797	3296897	protein_coding	Myadm	exon	ENSMUSG00000068566	ProperStrand	31	chr1	162968447	162968510	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-7.3933
chr2	94267695	94267715	protein_coding	Api5	exon	ENSMUSG00000027193	ProperStrand	51	chrX	100903479	100903496	protein_coding	Slc16a2	exon	ENSMUSG00000033965	NonProperStrand	5	1	-18.7776
chr11	75578914	75578945	protein_coding	Ywhae	utr3	ENSMUSG00000020849	ProperStrand	176	chr19	5031598	5031669	protein_coding	Slc29a2	utr3	ENSMUSG00000024891	ProperStrand	7	1	-15.5972
chr16	23110858	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	chr11	115274340	115274367	tRNA	tRNA1022-ArgCCT	.	1638215	ProperStrand	28	1	-1.1386
chr4	43505722	43505782	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr3	104880588	104880702	protein_coding	4930564D02Rik	utr5	ENSMUSG00000051788	ProperStrand	28	1	-4.4946
chr10	82418134	82418157	LTR	MT2B2	ERVL	chr10MT2B282418137	NonProperStrand	12	chr5	145908726	145908818	protein_coding	Bud31	utr3	ENSMUSG00000038722	ProperStrand	12	4	-inf
chr5	64485819	64485836	protein_coding	Pgm1	intron	ENSMUSG00000029171	NonProperStrand	20	chr4	70021848	70021897	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	1	-10.3302
chr15	83073622	83073642	protein_coding	A4galt	intron	ENSMUSG00000047878	ProperStrand	21	chr10	110918549	110918639	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	5	-21.2248
chr10	58831988	58832029	protein_coding	P4ha1	exon	ENSMUSG00000019916	ProperStrand	50	chr4	131908236	131908286	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.6894
chr6	57712505	57712521	protein_coding	Vopp1	exon	ENSMUSG00000037788	NonProperStrand	21	chr7	117190015	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-8.8072
chr7	118218391	118225134	protein_coding	Eif4g2	utr5	ENSMUSG00000005610	ProperStrand	134	chr16	23110910	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	9	-2.9931
chr17	38290745	38290764	LTR	MurERV4-int	ERVK	chr17MurERV4-int38290059	ProperStrand	21	chr18	71502399	71502416	protein_coding	Dcc	exon	ENSMUSG00000060534	NonProperStrand	29	1	-16.9636
chr8	59992827	59992917	protein_coding	Hmgb2	exon	ENSMUSG00000054717	ProperStrand	184	chr11	97643011	97643091	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-0.8291
chr12	111891499	111891589	protein_coding	Dync1h1	intron	ENSMUSG00000018707	ProperStrand	648	chr18	35102297	35102349	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-2.1574
chr11	3102648	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr7	52120948	52122193	protein_coding	Ptov1	exon	ENSMUSG00000038502	ProperStrand	26	1	-10.4787
chr19	23216519	23216619	protein_coding	Klf9	exon	ENSMUSG00000033863	ProperStrand	83	chr1	63225279	63225322	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	1	-8.1868
chr13	37918022	37918038	protein_coding	Rreb1	utr5	ENSMUSG00000039087	NonProperStrand	8	chr7	116663633	116663767	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-15.1552
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr2	130979139	130979156	protein_coding	1700037H04Rik	intron	ENSMUSG00000027327	NonProperStrand	26	1	-7.5698
chr14	10879945	10879963	protein_coding	Fhit	intron	ENSMUSG00000060579	NonProperStrand	51	chr11	48616643	48616706	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	2	-15.2945
chr9	100893239	100893329	protein_coding	Pccb	intron	ENSMUSG00000032527	NonProperStrand	2	chr9	100890159	100890239	protein_coding	Pccb	intron	ENSMUSG00000032527	ProperStrand	4	1	-inf
chr3	152052798	152055194	protein_coding	Usp33	exon	ENSMUSG00000025437	ProperStrand	11	chr17	35089181	35089220	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-8.9052
chr7	82830193	82832112	protein_coding	Akap13	exon	ENSMUSG00000066406	NonProperStrand	9	chr9	15119631	15119746	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-14.8450
chr2	126470543	126470643	protein_coding	Gabpb1	intron	ENSMUSG00000027361	ProperStrand	54	chr11	77500519	77500536	protein_coding	Nufip2	intron	ENSMUSG00000037857	NonProperStrand	4	1	-18.8381
chr6	128316038	128316086	protein_coding	Foxm1	exon	ENSMUSG00000001517	ProperStrand	31	chr1	134018692	134018903	protein_coding	Cdk18	exon	ENSMUSG00000026437	ProperStrand	51	1	-14.9765
chr11	60370927	60370943	protein_coding	Alkbh5	utr3	ENSMUSG00000042650	ProperStrand	203	chr9	15118322	15118357	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-1.4322
chr6	54379732	54379760	lincRNA	9130019P16Rik	exon	ENSMUSG00000073067	ProperStrand	255	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-2.3274
chr2	72931729	72931745	protein_coding	Ola1	exon	ENSMUSG00000027108	ProperStrand	17	chr10	23505152	23505234	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.3129
chr8	67209512	67209612	protein_coding	Sc4mol	utr5	ENSMUSG00000031604	ProperStrand	24	chr16	23111770	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-5.9954
chr15	75916790	75916890	protein_coding	Nrbp2	utr3	ENSMUSG00000075590	ProperStrand	1	chr5	130300528	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-inf
chr9	22156662	22176636	protein_coding	Anln	exon	ENSMUSG00000036777	ProperStrand	133	chr11	69483136	69483232	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	5	-7.0900
chr15	71224763	71224780	LTR	RLTR11B	ERVK	chr15RLTR11B71224614	ProperStrand	1	chr8	86185024	86185055	protein_coding	Gipc1	exon	ENSMUSG00000019433	ProperStrand	60	1	-inf
chr18	48207210	48207285	protein_coding	Gm5506	exon	ENSMUSG00000059040	ProperStrand	105	chr2	26494717	26494807	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.1422
chr15	98781121	98781221	protein_coding	Tuba1a	exon	ENSMUSG00000072235	ProperStrand	17	chr11	77996560	77996597	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-8.6251
chr4	137305508	137308482	protein_coding	Alpl	exon	ENSMUSG00000028766	ProperStrand	80	chr4	131865956	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.3420
chr11	69037669	69037685	protein_coding	Gucy2e	exon	ENSMUSG00000020890	NonProperStrand	99	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-7.9256
chr4	117317857	117317929	protein_coding	Eri3	intron	ENSMUSG00000033423	ProperStrand	246	chr4	20047232	20047248	protein_coding	Nkain3	utr3	ENSMUSG00000055761	ProperStrand	34	1	-11.6307
chrX	152009278	152009294	protein_coding	Ptchd1	exon	ENSMUSG00000041552	NonProperStrand	294	chr15	98356852	98356913	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	1	-4.6389
chr11	102266230	102266378	protein_coding	Slc25a39	exon	ENSMUSG00000018677	ProperStrand	35	chr5	65653918	65653935	protein_coding	Rfc1	utr3	ENSMUSG00000029191	ProperStrand	53	1	-14.6534
chr10	127558221	127558253	protein_coding	Baz2a	exon	ENSMUSG00000040054	ProperStrand	274	chr9	120038466	120038528	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-0.7482
chrX	56474201	56474218	protein_coding	Fgf13	intron	ENSMUSG00000031137	NonProperStrand	10	chr10	79755560	79756429	protein_coding	Rps15	exon	ENSMUSG00000063457	ProperStrand	119	1	-15.6056
chr5	143666039	143666139	protein_coding	Actb	exon	ENSMUSG00000029580	ProperStrand	446	chr2	130103781	130103825	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-4.5333
chr10	4822137	4822153	protein_coding	Syne1	intron	ENSMUSG00000019769	ProperStrand	49	chr13	104814923	104814962	protein_coding	Nln	utr3	ENSMUSG00000021710	ProperStrand	47	1	-14.2248
chr9	102627053	102627143	protein_coding	Amotl2	exon	ENSMUSG00000032531	ProperStrand	54	chr4	56910508	56910588	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	16	-20.1897
chr11	97642952	97643008	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	chr7	86611350	86611375	tRNA	tRNA387-ArgTCG	.	195560	ProperStrand	77	1	-2.0563
chr2	24462616	24463049	protein_coding	Cacna1b	exon	ENSMUSG00000004113	ProperStrand	83	chr1	162965531	162965572	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.6984
chr16	72742503	72742551	protein_coding	Robo1	exon	ENSMUSG00000022883	ProperStrand	47	chr5	31190882	31190922	tRNA	tRNA110-AlaAGC	.	373406	ProperStrand	16	2	-inf
chr16	33813743	33813763	protein_coding	Muc13	intron	ENSMUSG00000022824	ProperStrand	4	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-8.7752
chr11	20125145	20125224	protein_coding	Rab1	utr3	ENSMUSG00000020149	ProperStrand	32	chr11	51551334	51551424	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	1	-8.9620
chr8	11427556	11427572	protein_coding	Col4a2	exon	ENSMUSG00000031503	ProperStrand	74	chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	1	-10.1972
chr6	123089131	123089269	protein_coding	Clec4a2	exon	ENSMUSG00000030148	ProperStrand	44	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.8495
chr17	47625556	47625585	protein_coding	Taf8	utr3	ENSMUSG00000023980	ProperStrand	25	chr7	29136613	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-6.6779
chr18	79799781	79799861	LINE	L1Md_F2	L1	chr18L1Md_F279799002	NonProperStrand	1	chr18	82057735	82057825	LTR	RMER5	ERV1	chr18RMER582057755	ProperStrand	1	1	-inf
chr11	48617735	48617788	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	chr9	15118332	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-0.7493
chr3	33957001	33957149	protein_coding	Fxr1	exon	ENSMUSG00000027680	ProperStrand	58	chr4	131908687	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.2702
chr16	89809765	89809782	protein_coding	Tiam1	intron	ENSMUSG00000002489	NonProperStrand	26	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-12.1205
mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	NonProperStrand	8	chr18	10151041	10151141	snRNA	ENSMUSG00000065941_U1	.	ENSMUSG00000065941	NonProperStrand	3	2	-22.1601
chr16	90230461	90255085	protein_coding	Scaf4	intron	ENSMUSG00000022983	ProperStrand	44	chr16	23110909	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.3090
chr1	36764781	36764861	protein_coding	Actr1b	intron	ENSMUSG00000037351	ProperStrand	14	chr1	30860795	30860885	protein_coding	Phf3	exon	ENSMUSG00000048874	ProperStrand	102	1	-15.2171
chr11	98858117	98859150	protein_coding	Top2a	exon	ENSMUSG00000020914	ProperStrand	324	chr10	60886167	60886257	protein_coding	Nodal	exon	ENSMUSG00000037171	ProperStrand	30	1	-11.3345
chr5	116011011	116011195	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	chr7	51505512	51505592	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	1	-5.6542
chr3	101408467	101408485	protein_coding	Atp1a1	utr5	ENSMUSG00000033161	NonProperStrand	5	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr19	8799581	8799644	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	chr6	71832550	71832688	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	5	-3.4028
chr7	4704107	4704197	protein_coding	Cox6b2	intron	ENSMUSG00000051811	ProperStrand	4	chr4	131908362	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-6.5415
chr4	118954216	118954809	protein_coding	Ybx1	exon	ENSMUSG00000028639	ProperStrand	171	chr4	122968666	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-4.2521
chr11	101324410	101327101	protein_coding	Vat1	exon	ENSMUSG00000034993	ProperStrand	69	chr7	38128314	38128331	protein_coding	Zfp536	intron	ENSMUSG00000043456	NonProperStrand	236	1	-10.2862
chr11	98312763	98312985	protein_coding	Grb7	exon	ENSMUSG00000019312	ProperStrand	10	chr19	4918037	4918117	protein_coding	Dpp3	exon	ENSMUSG00000063904	ProperStrand	36	1	-17.9292
chr11	48619073	48619148	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	chr18	33954919	33954951	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-0.7728
chr2	38280200	38280225	lincRNA	Gm13589	intron	ENSMUSG00000085950	NonProperStrand	31	chrX	138763646	138763741	protein_coding	Acsl4	intron	ENSMUSG00000031278	ProperStrand	31	1	-15.9237
chrX	151772839	151772856	protein_coding	Prdx4	exon	ENSMUSG00000025289	ProperStrand	29	chr4	141175331	141175360	protein_coding	Slc25a34	utr3	ENSMUSG00000040740	ProperStrand	15	2	-20.7276
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr8	129468739	129468829	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	3	-1.3178
chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	chr7	52382237	52382288	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-2.4493
chr17	56840904	56842215	protein_coding	Ranbp3	exon	ENSMUSG00000002372	ProperStrand	34	chr9	15119289	15119369	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-6.2247
chr1	71341491	71341508	protein_coding	Abca12	exon	ENSMUSG00000050296	NonProperStrand	143	chr9	40612852	40612921	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	1	-7.8081
chr7	52377852	52378200	protein_coding	Rps11	exon	ENSMUSG00000003429	ProperStrand	49	chr4	131908270	131908360	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.7204
chr2	121370419	121370441	protein_coding	Wdr76	utr3	ENSMUSG00000027242	ProperStrand	25	chr14	56159294	56159311	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	1	-12.7117
chr2	121949511	121949527	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	chr4	137837376	137842357	protein_coding	Kif17	exon	ENSMUSG00000028758	ProperStrand	15	1	-13.1189
chr9	56266647	56266665	protein_coding	Hmg20a	utr5	ENSMUSG00000032329	ProperStrand	87	chr14	33005110	33005138	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-3.3060
chr11	42440243	42440259	protein_coding	Gabrb2	exon	ENSMUSG00000007653	ProperStrand	248	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-0.9948
chr9	37318271	37318331	protein_coding	BC024479	intron	ENSMUSG00000042138	ProperStrand	17	chr5	130295524	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-7.7636
chr8	114527197	114527257	protein_coding	Kars	exon	ENSMUSG00000031948	ProperStrand	89	chr15	34370545	34370621	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	6	-15.6744
chr10	79589463	79589806	protein_coding	Stk11	exon	ENSMUSG00000003068	ProperStrand	24	chr14	76246050	76246140	protein_coding	Tpt1	exon	ENSMUSG00000060126	ProperStrand	236	1	-12.4217
chr16	17040353	17040419	protein_coding	Mapk1	intron	ENSMUSG00000063358	ProperStrand	67	chr1	162968443	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-5.8620
chr7	29174731	29174829	protein_coding	Med29	intron	ENSMUSG00000003444	ProperStrand	6	chr14	31504452	31504474	protein_coding	Rft1	utr3	ENSMUSG00000052395	NonProperStrand	7	3	-19.7429
chr4	140723745	140723761	protein_coding	Fbxo42	exon	ENSMUSG00000028920	ProperStrand	91	chr6	56828316	56828368	protein_coding	Fkbp9	utr3	ENSMUSG00000029781	ProperStrand	39	1	-13.3461
chr13	14145475	14145491	protein_coding	Ggps1	utr3	ENSMUSG00000021302	NonProperStrand	1	chr7	118219586	118219633	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-inf
chr17	35299566	35299595	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	chrX	54644624	54644661	snoRNA	ENSMUSG00000065110_Snord61	.	ENSMUSG00000065110	ProperStrand	40	4	-17.0407
chr4	149191838	149191884	rRNA	n-R5s193	.	ENSMUSG00000064798	ProperStrand	17	chr19	8963087	8963165	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-7.6887
chrX	49750332	49967094	protein_coding	Gpc3	exon	ENSMUSG00000055653	ProperStrand	43	chr7	116663675	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-5.3514
chr5	147646411	147646440	snoRNA	ENSMUSG00000077185_SNORD102	.	ENSMUSG00000077185	ProperStrand	142	chr5	130300436	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-2.2781
mmu-miR-6240	3	25	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr17	66468410	66468428	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	1	-2.6683
chr9	120039532	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	chr4	131865378	131865859	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	54	-8.0380
chr13	9833551	9833675	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr2	168426897	168426915	protein_coding	Nfatc2	intron	ENSMUSG00000027544	NonProperStrand	49	1	-5.3482
chr10	4999647	4999663	protein_coding	Syne1	exon	ENSMUSG00000019769	ProperStrand	49	chr2	109825165	109825265	protein_coding	Lgr4	intron	ENSMUSG00000050199	ProperStrand	27	1	-15.3485
chr14	124353869	124353886	protein_coding	Itgbl1	exon	ENSMUSG00000032925	ProperStrand	159	chr2	32818886	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-3.6145
chr7	54110633	54110697	protein_coding	Ldha	utr3	ENSMUSG00000063229	ProperStrand	280	chr7	117189957	117190047	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-0.9104
chr13	9833562	9833615	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr10	79747996	79748029	protein_coding	Dazap1	exon	ENSMUSG00000069565	ProperStrand	57	1	-5.0538
chr4	53873572	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	chr11	6428035	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	6	-3.9012
chr1	16092006	16093365	protein_coding	Rpl7	exon	ENSMUSG00000043716	ProperStrand	93	chr16	23111433	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-1.4952
chr10	60896186	60896219	protein_coding	Eif4ebp2	utr3	ENSMUSG00000020091	ProperStrand	39	chr16	23111389	23111448	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.9006
chr7	29570833	29570889	protein_coding	Sirt2	exon	ENSMUSG00000015149	ProperStrand	4	chr6	115757992	115758092	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-11.0996
chr17	86339609	86339626	SINE	ID	ID	chr17ID86339609	NonProperStrand	9	chr11	6428060	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-6.9084
chr1	36613733	36613751	protein_coding	Sema4c	utr5	ENSMUSG00000026121	NonProperStrand	5	chr3	123210854	123210919	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-11.4476
chr15	77949855	77949872	protein_coding	Cacng2	utr5	ENSMUSG00000019146	ProperStrand	11	chr5	121655016	121655085	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-7.0917
chr11	44278885	44278924	protein_coding	Ublcp1	exon	ENSMUSG00000041231	ProperStrand	13	chr4	131865381	131865458	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	12	-inf
chr16	11144136	11144227	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr17	33788885	33788923	protein_coding	Hnrnpm	intron	ENSMUSG00000059208	NonProperStrand	8	5	-18.8625
chr12	74263376	74263397	protein_coding	Mnat1	intron	ENSMUSG00000021103	NonProperStrand	5	chr2	26768049	26768112	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	2	-18.9732
chr4	116991019	116991036	protein_coding	Rnf220	intron	ENSMUSG00000028677	ProperStrand	131	chr4	131866186	131866276	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-2.2829
chr17	46814084	46814100	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr4	137867814	137867831	protein_coding	Ddost	exon	ENSMUSG00000028757	NonProperStrand	2	1	-16.7962
chr4	131865855	131865927	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr9	104310992	104311014	tRNA	tRNA961-GluTTC	.	469666	ProperStrand	5	1	-6.5022
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	52378398	52378460	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	2	-1.3271
chr7	29079585	29079608	protein_coding	Dll3	exon	ENSMUSG00000003436	ProperStrand	2	chr14	47395863	47395896	protein_coding	Cnih	utr3	ENSMUSG00000015759	ProperStrand	10	1	-inf
chr5	121897249	121902203	protein_coding	Erp29	exon	ENSMUSG00000029616	ProperStrand	33	chr5	121655016	121655039	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.8873
chr9	21075222	21075290	protein_coding	Atg4d	exon	ENSMUSG00000002820	ProperStrand	9	chr2	26494773	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-6.8145
chr10	126428613	126428629	protein_coding	Ctdsp2	exon	ENSMUSG00000078429	NonProperStrand	4	chr2	26768368	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	3	-19.6483
chr2	25312429	25313191	protein_coding	Clic3	exon	ENSMUSG00000015093	ProperStrand	79	chr9	15119631	15119692	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.1645
chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	chr8	98269959	98270060	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	5	-0.7782
chr4	149991075	149991128	protein_coding	Rere	exon	ENSMUSG00000039852	ProperStrand	76	chr19	8946035	8946142	protein_coding	Ubxn1	utr5	ENSMUSG00000071655	ProperStrand	68	1	-12.5866
chr3	53309443	53309460	protein_coding	Stoml3	exon	ENSMUSG00000027744	ProperStrand	1	chr1	162966812	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-inf
chr8	129468746	129468832	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	chr10	30530999	30531020	tRNA	tRNA81-GluCTC	.	210296	ProperStrand	154	3	-6.9719
chr16	96303424	96303441	protein_coding	Brwd1	exon	ENSMUSG00000022914	ProperStrand	77	chr17	23961925	23964492	protein_coding	Tceb2	exon	ENSMUSG00000055839	ProperStrand	12	1	-16.0853
chr14	80262508	80262525	lincRNA	Gm6999	intron	ENSMUSG00000075495	ProperStrand	265	chr2	26494706	26494829	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	3	-2.7656
chr8	86243724	86243814	protein_coding	Ddx39	exon	ENSMUSG00000005481	ProperStrand	24	chr10	23505154	23505234	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.6868
chr5	114403438	114403528	protein_coding	Ssh1	intron	ENSMUSG00000042121	ProperStrand	8	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-9.2836
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr16	93903141	93903158	protein_coding	Chaf1b	intron	ENSMUSG00000022945	NonProperStrand	5	1	-9.5409
chr7	81084834	81084850	protein_coding	St8sia2	utr3	ENSMUSG00000025789	NonProperStrand	6	chr4	153534526	153534542	protein_coding	Tprgl	exon	ENSMUSG00000029030	ProperStrand	50	1	-18.0434
chr12	110888864	110888885	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr8	83138737	83138753	protein_coding	Frem3	exon	ENSMUSG00000042353	NonProperStrand	53	1	-8.9153
chr17	39985423	39985540	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr1	89681244	89681334	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	20	-inf
chr13	38071223	38071273	protein_coding	Ssr1	utr3	ENSMUSG00000021427	ProperStrand	65	chr14	76247765	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-4.0209
chr19	29669300	29669390	protein_coding	C030046E11Rik	exon	ENSMUSG00000038658	ProperStrand	104	chr16	23111741	23111821	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.1039
chr13	60837017	60837037	protein_coding	Dapk1	intron	ENSMUSG00000021559	ProperStrand	109	chr12	11098800	11098818	protein_coding	Kcns3	exon	ENSMUSG00000043673	NonProperStrand	7	1	-16.5497
chr4	118299718	118299818	protein_coding	Ebna1bp2	utr3	ENSMUSG00000028729	ProperStrand	18	chr1	162966815	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-8.6776
chr15	99433436	99433452	protein_coding	Aqp6	exon	ENSMUSG00000043144	NonProperStrand	45	chr18	35716752	35716842	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-6.9701
chrX	71027568	71027612	protein_coding-noncoding	Idh3g	utr3	ENSMUSG00000002010	ProperStrand	1	chr4	131908719	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-inf
chr2	26493393	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr13	64863287	64863304	protein_coding	Cntnap3	exon	ENSMUSG00000033063	ProperStrand	87	1	-5.4658
chr9	75473767	75473783	protein_coding	Lysmd2	exon	ENSMUSG00000032184	NonProperStrand	20	chr11	6519893	6519944	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-10.1623
chr13	75509884	75509964	LINE	L1VL1	L1	chr13L1VL175506252	NonProperStrand	1	chr15	49420975	49421065	LINE	L1_Mus3	L1	chr15L1_Mus349420955	NonProperStrand	1	1	-inf
chr1	88253254	88253569	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chr15	5068440	5068478	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	7	-9.2385
chr5	144917843	144925557	protein_coding	Lmtk2	exon	ENSMUSG00000038970	ProperStrand	60	chr2	145077957	145209258	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-7.7234
chr16	23111373	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	chr2	130103751	130103825	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	22	-6.0397
chr4	118804754	118809022	protein_coding	Slc2a1	exon	ENSMUSG00000028645	ProperStrand	361	chr18	35716684	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	10	-7.0051
chr9	120039533	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	chr11	98878344	98878468	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	13	-1.9225
chr15	27784789	27785890	protein_coding	Trio	exon	ENSMUSG00000022263	ProperStrand	108	chr17	13112529	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-3.4762
chr2	163842447	163842537	protein_coding	Ywhab	utr3	ENSMUSG00000018326	ProperStrand	33	chr8	98269967	98270047	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-6.7237
chr7	30980122	30983798	protein_coding	Capns1	utr5	ENSMUSG00000001794	ProperStrand	35	chrX	34622905	34622995	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-4.1730
chr18	67449096	67461855	protein_coding	Impa2	exon	ENSMUSG00000024525	ProperStrand	31	chr16	23111695	23111775	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.0285
chr7	72488610	72499733	protein_coding	Tjp1	exon	ENSMUSG00000030516	ProperStrand	78	chr1	89673629	89673719	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	2	-4.8657
chr5	108068197	108068287	protein_coding	Rpap2	intron	ENSMUSG00000033773	ProperStrand	12	chr7	51505507	51505587	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	3	-inf
chr1	187193532	187235650	protein_coding	Eprs	exon	ENSMUSG00000026615	ProperStrand	149	chr5	130300512	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-2.1716
chr19	11857619	11859888	protein_coding	Stx3	exon	ENSMUSG00000041488	ProperStrand	37	chr4	131908236	131908298	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-5.9391
chr7	51503457	51503527	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	chrX	113862531	113862571	snoRNA	ENSMUSG00000088518_SNORA9	.	ENSMUSG00000088518	ProperStrand	280	3	-12.9000
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr2	153050783	153050799	protein_coding	Tspyl3	exon	ENSMUSG00000074671	ProperStrand	228	1	-7.7603
chr14	65694450	65694498	protein_coding	Extl3	exon	ENSMUSG00000021978	ProperStrand	36	chr2	158185566	158185656	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-7.5039
chr11	68603801	68603820	protein_coding	Myh10	intron	ENSMUSG00000020900	ProperStrand	91	chr1	162966189	162966242	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-6.7484
chr18	80408375	80408462	protein_coding	Gm16286	exon	ENSMUSG00000024571	ProperStrand	15	chr1	162966853	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-9.0520
chr3	95059198	95061966	protein_coding	Prune	exon	ENSMUSG00000015711	ProperStrand	21	chr16	23110828	23110994	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.9373
chr6	146570497	146572165	protein_coding	Tm7sf3	exon	ENSMUSG00000040234	ProperStrand	43	chr1	88252837	88252879	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-7.3033
chr15	81110991	81111009	SINE	ID4	ID	chr15ID481110956	ProperStrand	272	chr7	117166721	117166760	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-2.0858
chr7	106590641	106590659	protein_coding	Gdpd5	intron	ENSMUSG00000035314	NonProperStrand	14	chr7	148634731	148634840	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-6.8488
chr1	80273091	80273954	protein_coding	Cul3	exon	ENSMUSG00000004364	ProperStrand	15	chr16	23110909	23110962	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.0842
chr1	174436349	174436386	protein_coding	Tagln2	exon	ENSMUSG00000026547	ProperStrand	39	chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	1	-10.9430
chr1	162967734	162967797	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	chr17	24857716	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	5	-3.2308
chr6	134218268	134218293	protein_coding	Etv6	utr3	ENSMUSG00000030199	ProperStrand	46	chr1	155272659	155272676	protein_coding	1700012A16Rik	exon	ENSMUSG00000042708	ProperStrand	523	1	-9.5133
chr14	26279027	26322142	lincRNA	D930049A15Rik	exon	ENSMUSG00000087535	ProperStrand	13	chr1	162965531	162965587	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-6.2408
chr1	39424757	39425000	protein_coding	Rpl31	utr5	ENSMUSG00000073702	ProperStrand	41	chr18	35714143	35714254	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.1545
chr17	47748060	47748109	protein_coding	Bysl	exon	ENSMUSG00000023988	ProperStrand	48	chr10	23505205	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-2.9082
chr7	117189863	117189944	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr18	35714145	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	23	-9.3006
chr14	76132739	76132773	protein_coding	Cog3	exon	ENSMUSG00000034893	ProperStrand	37	chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	3	-15.4819
chr4	107596083	107596100	protein_coding	Cpt2	utr5	ENSMUSG00000028607	NonProperStrand	106	chr15	101926711	101926736	protein_coding	Eif4b	utr3	ENSMUSG00000058655	ProperStrand	484	1	-7.9957
chr11	106923964	106924054	protein_coding	Bptf	exon	ENSMUSG00000040481	ProperStrand	70	chr16	23110902	23110995	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-1.8309
chr3	131025771	131025788	protein_coding	Sgms2	utr3	ENSMUSG00000050931	ProperStrand	4	chr2	158204033	158204087	snoRNA	ENSMUSG00000065840_SNORA71	.	ENSMUSG00000065840	ProperStrand	107	1	-17.8438
chr17	35822284	35822362	protein_coding	Ddr1	exon	ENSMUSG00000003534	ProperStrand	129	chr17	13112529	13112565	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-3.1539
chr1	162967490	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	chr4	86232354	86232474	snoRNA	ENSMUSG00000088958_Scarna8	.	ENSMUSG00000088958	ProperStrand	366	7	-8.0169
chr1	162967537	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	chr13	65259659	65259716	snoRNA	ENSMUSG00000089161_SNORA48	.	ENSMUSG00000089161	ProperStrand	28	1	-4.9223
chr3	36902684	36902716	protein_coding	4932438A13Rik	exon	ENSMUSG00000037270	ProperStrand	96	chr16	23111373	23111463	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	5	-4.9511
chr4	114741487	114741504	protein_coding	Tal1	utr3	ENSMUSG00000028717	NonProperStrand	69	chr17	39985146	39985229	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	3	-13.1217
chr1	37891200	37891296	protein_coding-noncoding	Tsga10	utr3	ENSMUSG00000060771	ProperStrand	1	chr17	35087894	35087945	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-inf
chr2	90235298	90235330	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	26058291	26058377	protein_coding	Cic	exon	ENSMUSG00000005442	ProperStrand	80	2	-6.5955
chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	chr11	106362568	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	2	-6.8054
chr14	35225561	35225651	protein_coding	Bmpr1a	utr3	ENSMUSG00000021796	ProperStrand	21	chr16	23110902	23110982	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.5481
chr17	71343868	71343889	protein_coding	Myl12a	utr3	ENSMUSG00000024048	ProperStrand	29	chr5	74489542	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-5.1714
chr11	30018430	30019401	protein_coding	Spnb2	exon	ENSMUSG00000020315	ProperStrand	103	chr7	116664791	116664871	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.6704
chr6	143750562	143750580	LTR	ORR1A2-int	MaLR	chr6ORR1A2-int143750295	NonProperStrand	2	chr16	23110844	23110907	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr10	128139609	128140792	protein_coding	Cdk2	exon	ENSMUSG00000025358	ProperStrand	19	chr11	69481333	69481413	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	7	-21.0358
chr6	115573523	115576324	protein_coding	Raf1	exon	ENSMUSG00000000441	ProperStrand	30	chr16	23110988	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.0885
chr5	33369489	33369587	protein_coding	Ywhah	exon	ENSMUSG00000018965	ProperStrand	81	chr8	129468746	129468777	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-3.8471
chr3	88117195	88117279	protein_coding	Cct3	exon	ENSMUSG00000001416	ProperStrand	82	chr2	132135772	132135798	protein_coding	Cds2	utr3	ENSMUSG00000058793	ProperStrand	47	1	-13.1807
chr17	6008090	6008180	protein_coding	Synj2	intron	ENSMUSG00000023805	ProperStrand	41	chr4	131865856	131865936	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.3878
chr9	113564028	113564118	protein_coding	Pdcd6ip	utr3	ENSMUSG00000032504	ProperStrand	53	chr5	74489595	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-4.0106
chr4	86502120	86502210	protein_coding	Rps6	exon	ENSMUSG00000028495	ProperStrand	263	chrX	71517821	71517908	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-3.6994
chr3	121476977	121477076	protein_coding	Abcd3	exon	ENSMUSG00000028127	ProperStrand	10	chr17	24857777	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-9.4148
chr6	14538543	14538633	LINE	Lx7	L1	chr6Lx714538041	NonProperStrand	1	chr6	14538881	14538971	LTR	BGLII	ERVK	chr6BGLII14538686	ProperStrand	1	1	-inf
chr9	118468104	118468194	protein_coding	Golga4	exon	ENSMUSG00000038708	ProperStrand	95	chr19	8800377	8800463	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	12	-inf
chr4	149988690	149988760	protein_coding	Rere	exon	ENSMUSG00000039852	ProperStrand	76	chr14	31827477	31827545	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	2	-10.4732
chr10	90518742	90518758	protein_coding	Apaf1	exon	ENSMUSG00000019979	ProperStrand	27	chr7	103376959	103377005	protein_coding	Odz4	intron	ENSMUSG00000048078	ProperStrand	93	1	-14.0492
chr1	89673728	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	chr1	145626100	145626200	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	3	-1.1128
chr2	90235286	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	66798457	66798473	protein_coding	1110012J17Rik	exon	ENSMUSG00000052105	NonProperStrand	38	2	-8.7876
chr2	48927391	48927407	protein_coding	Mbd5	intron	ENSMUSG00000036792	NonProperStrand	25	chr1	192612307	192612365	protein_coding	Rps6kc1	intron	ENSMUSG00000089872	ProperStrand	241	1	-12.2975
chr13	101541068	101541087	protein_coding	Cenph	intron	ENSMUSG00000045273	NonProperStrand	45	chr11	97643007	97643092	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.9748
chr9	40612905	40612926	protein_coding-noncoding	Hspa8	utr5	ENSMUSG00000015656	ProperStrand	7	chr3	87862387	87862414	protein_coding	Apoa1bp	utr5	ENSMUSG00000028070	ProperStrand	4	1	-inf
chr16	90259262	90259362	protein_coding	Scaf4	intron	ENSMUSG00000022983	ProperStrand	44	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.1738
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	1	-6.9635
chr2	90235293	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	3	-3.7005
chr18	76297633	76297649	protein_coding	Zbtb7c	exon	ENSMUSG00000044646	ProperStrand	64	chr2	63936035	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-7.7321
chr4	135492849	135492932	protein_coding	Fuca1	exon	ENSMUSG00000028673	ProperStrand	16	chr5	114811602	114811618	protein_coding	Myo1h	intron	ENSMUSG00000066952	ProperStrand	4	1	-inf
chr9	78497167	78497184	protein_coding	Cd109	intron	ENSMUSG00000046186	NonProperStrand	36	chr8	13876096	13876126	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-8.1660
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	ProperStrand	10	chr13	96100551	96100692	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	NonProperStrand	8	2	-20.0801
chr11	31772549	31772615	protein_coding	Cpeb4	exon	ENSMUSG00000020300	ProperStrand	4	chr3	108357255	108357308	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-10.1312
chr13	3537371	3537424	protein_coding	Gdi2	utr5	ENSMUSG00000021218	ProperStrand	49	chr18	73693118	73693139	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-5.9216
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr9	45198928	45199653	protein_coding	Fxyd6	exon	ENSMUSG00000066705	NonProperStrand	108	1	-6.5724
chr7	106675887	106675987	SINE	B3	B2	chr7B3106675857	NonProperStrand	1	chr17	24857779	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-inf
chr2	98174031	98174048	LTR	IAPLTR3-int	ERVK	chr2IAPLTR3-int98170118	ProperStrand	37	chr8	13416897	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-7.4170
chr11	78313939	78313956	protein_coding	Vtn	exon	ENSMUSG00000017344	ProperStrand	188	chr5	67389993	67390010	protein_coding	Limch1	exon	ENSMUSG00000037736	ProperStrand	20	1	-13.2510
chr7	6229114	6233072	protein_coding	Gm6792	exon	ENSMUSG00000053367	ProperStrand	5	chr18	35716835	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-11.6367
chr11	69617286	69617312	protein_coding	Tmem102	exon	ENSMUSG00000089876	ProperStrand	4	chr9	120037933	120038023	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-10.3050
chr1	30998527	30998617	protein_coding	Ptp4a1	utr3	ENSMUSG00000026064	ProperStrand	26	chr4	131908812	131908892	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.5345
chr1	63225322	63225397	protein_coding	Eef1b2	intron	ENSMUSG00000025967	ProperStrand	106	chr3	123210893	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-3.7208
chr3	108187818	108187835	protein_coding	Psrc1	utr5	ENSMUSG00000068744	NonProperStrand	12	chr2	26493398	26493473	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-6.9066
chr5	38937089	38938258	protein_coding	Wdr1	exon	ENSMUSG00000005103	ProperStrand	16	chr4	131908689	131908779	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.4136
chr6	85411549	85417715	protein_coding	Cct7	exon	ENSMUSG00000030007	ProperStrand	173	chr19	8799830	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	8	-inf
chr3	89549873	89550536	protein_coding	Adar	exon	ENSMUSG00000027951	ProperStrand	52	chr13	49779681	49779762	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-7.2985
chr2	34628262	34628705	protein_coding	Hspa5	exon	ENSMUSG00000026864	ProperStrand	181	chr16	23110457	23110557	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	4	-4.1022
chr8	112065767	112066296	protein_coding	Pmfbp1	exon	ENSMUSG00000031727	NonProperStrand	17	chr4	138918103	138918119	protein_coding	C230096C10Rik	exon	ENSMUSG00000078517	ProperStrand	69	1	-15.5934
chr2	90235298	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	166890781	166890858	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	3	-5.1930
chr5	100855929	100855974	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr15	101641996	101642012	protein_coding	Krt2	exon	ENSMUSG00000064201	ProperStrand	4	1	-12.2924
chr7	30231491	30231593	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	chr4	131908687	131908794	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	10	-0.8544
chr1	72871402	72871502	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	chr1	162967137	162967178	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	1	-4.9125
chr11	101255363	101255453	SINE	B1_Mus2	Alu	chr11B1_Mus2101255368	NonProperStrand	1	chr13	89721303	89721393	protein_coding	Hapln1	intron	ENSMUSG00000021613	NonProperStrand	1	1	-inf
chr2	90235312	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	37384310	37384327	LTR	ORR1E	MaLR	chr7ORR1E37384234	NonProperStrand	30	1	-5.8128
chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	chr2	49307125	49307198	protein_coding	Epc2	utr5	ENSMUSG00000069495	ProperStrand	15	1	-9.7858
chr13	40823795	40823812	protein_coding	Tfap2a	exon	ENSMUSG00000021359	ProperStrand	49	chr10	127956518	127956569	protein_coding	Esyt1	exon	ENSMUSG00000025366	ProperStrand	31	1	-15.0524
chr2	130101266	130101308	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	chr1	9932565	9932606	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-1.5147
chr16	96343986	96346351	protein_coding	Hmgn1	exon	ENSMUSG00000040681	ProperStrand	38	chr2	158182156	158182194	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-5.8964
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr10	126769539	126769556	protein_coding	Gli1	exon	ENSMUSG00000025407	NonProperStrand	4	1	-13.4632
chr18	68015020	68015889	protein_coding	Cep192	exon	ENSMUSG00000024542	ProperStrand	59	chr3	152450610	152450627	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	4	-19.6524
chr3	96218394	96218474	misc_RNA	Telomerase-vert	.	ENSMUSG00000064796	ProperStrand	443	chr7	148279214	148279700	protein_coding	Sigirr	exon	ENSMUSG00000025494	ProperStrand	30	27	-inf
chr8	41570003	41570019	protein_coding	Zdhhc2	utr3	ENSMUSG00000039470	NonProperStrand	85	chr17	35089182	35089227	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-4.8096
chr7	16534823	16534839	protein_coding	Ehd2	utr3	ENSMUSG00000074364	NonProperStrand	197	chr1	89673513	89673634	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-1.3166
chr16	23110829	23111005	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	chr7	127979028	127979074	tRNA	tRNA861-LeuTAG	.	924423	ProperStrand	49	3	-1.9572
chrX	106040564	106040581	lincRNA	2810403D21Rik	intron	ENSMUSG00000086629	NonProperStrand	4	chr4	116826700	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-12.4381
chr4	151706623	151706674	protein_coding	Rpl22	utr3	ENSMUSG00000028936	ProperStrand	112	chr2	26768368	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	2	-7.3193
chr5	111082719	111082737	protein_coding	Ddx51	exon	ENSMUSG00000029504	ProperStrand	54	chr1	89681215	89681288	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-5.6471
chr19	17297005	17297092	protein_coding	Prune2	utr3	ENSMUSG00000039126	ProperStrand	49	chr16	23110469	23110524	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.8132
mmu-miR-1839-3p	6	23	miRNA	mmu-miR-1839-3p	.	mmu-miR-1839-3p	ProperStrand	2	chr7	88674740	88674793	snoRNA	ENSMUSG00000093107_AC167122.1	.	ENSMUSG00000093107	ProperStrand	110	1	-inf
chr13	23647188	23647258	protein_coding	Hist1h1d	exon	ENSMUSG00000052565	ProperStrand	78	chr1	89673567	89673657	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	2	-4.8657
chr14	96988125	96988181	snoRNA	ENSMUSG00000064581_SNORA30	.	ENSMUSG00000064581	ProperStrand	146	chr3	108357255	108357355	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-2.8963
chr5	108334228	108334329	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	chr1	172975146	172975189	tRNA	tRNA699-GlyGCC	.	11996	ProperStrand	660	3	-2.7838
chr11	30040537	30040617	protein_coding	Spnb2	exon	ENSMUSG00000020315	ProperStrand	103	chr7	134176169	134176259	protein_coding	Kif22	exon	ENSMUSG00000030677	ProperStrand	63	1	-12.1301
chr2	49716995	49717013	protein_coding	Lypd6b	intron	ENSMUSG00000026765	ProperStrand	6	chr5	108334195	108334254	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-9.5107
chr13	54723202	54723218	protein_coding	Faf2	exon	ENSMUSG00000025873	ProperStrand	90	chr5	35369604	35371207	protein_coding	Rgs12	exon	ENSMUSG00000029101	ProperStrand	13	1	-15.6116
chr17	69737986	69738002	protein_coding	Zfp161	utr3	ENSMUSG00000049672	NonProperStrand	45	chr5	121655101	121655154	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.2899
chr7	112721563	112721581	protein_coding	Apbb1	intron	ENSMUSG00000037032	ProperStrand	9	chr2	32818883	32818921	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-9.3121
chr16	13836527	13836543	protein_coding	Pdxdc1	exon	ENSMUSG00000022680	ProperStrand	26	chr15	34370568	34370618	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-5.1461
chr7	16530679	16531254	protein_coding	Gltscr2	exon	ENSMUSG00000041560	ProperStrand	127	chr16	43886792	43886847	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	1	-6.5855
chr9	75315101	75315191	LTR	RLTR31_Mur	ERVK	chr9RLTR31_Mur75314775	NonProperStrand	1	chr8	73419703	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-inf
chr2	166297729	166297819	LTR	MLT2B3	ERVL	chr2MLT2B3166297706	NonProperStrand	1	chr2	166297619	166297709	Low_complexity	GA-rich	Low_complexity	chr2GA-rich166297586	ProperStrand	1	1	-inf
chr4	58083059	58083077	protein_coding	Svep1	exon	ENSMUSG00000028369	ProperStrand	54	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	4	-16.6178
chr14	47891103	47891145	protein_coding	Wdhd1	intron	ENSMUSG00000037572	ProperStrand	35	chr7	117189991	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-7.2652
chr11	95692883	95692899	protein_coding	Phospho1	utr3	ENSMUSG00000050860	ProperStrand	2	chr18	35716833	35716872	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-inf
chr7	30231503	30231593	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	chr11	6428077	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-1.0533
chr1	36748438	36749059	protein_coding	Cox5b	exon	ENSMUSG00000061518	ProperStrand	43	chr16	23109050	23109093	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-7.9477
chr8	73437112	73437195	protein_coding	Mtap1s	exon	ENSMUSG00000019261	ProperStrand	60	chr9	120037983	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-4.7058
mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr2	91470139	91470156	protein_coding	F2	exon	ENSMUSG00000027249	ProperStrand	3	1	-12.2357
chr6	51419792	51419874	protein_coding	Hnrnpa2b1	utr5	ENSMUSG00000004980	ProperStrand	166	chr8	73419657	73419723	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-2.7315
chr1	74576059	74576095	protein_coding	Rqcd1	utr3	ENSMUSG00000026174	ProperStrand	16	chr16	23110977	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.9771
chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	chr14	31952147	31952196	protein_coding	Nt5dc2	exon	ENSMUSG00000071547	ProperStrand	22	1	-11.5196
chr14	80262508	80262524	lincRNA	Gm6999	intron	ENSMUSG00000075495	ProperStrand	265	chr10	92944345	92944382	protein_coding	Lta4h	intron	ENSMUSG00000015889	ProperStrand	12	1	-13.6188
chr11	83579441	83579478	protein_coding	Heatr6	exon	ENSMUSG00000000976	ProperStrand	67	chr16	23111373	23111463	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-3.4940
chr19	5844007	5844043	non_coding	Neat1	.	ENSMUSG00000092274	ProperStrand	63	chr7	54442443	54442476	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-9.6313
chr2	156373371	156373388	protein_coding	0610011L14Rik	utr5	ENSMUSG00000027628	NonProperStrand	9	chr9	120039533	120039553	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-7.0468
chrX	110226224	110229674	protein_coding	Chm	exon	ENSMUSG00000025531	ProperStrand	9	chrX	34622906	34622966	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-6.8852
chr19	47343030	47343074	protein_coding	Sh3pxd2a	exon	ENSMUSG00000053617	ProperStrand	57	chr3	108357493	108357567	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	4	-14.6591
chr4	141696825	141696866	protein_coding	Kazn	utr3	ENSMUSG00000040606	ProperStrand	123	chr7	116664867	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-2.6597
chr13	104559434	104559524	protein_coding	Srek1	exon	ENSMUSG00000032621	ProperStrand	41	chr10	23505205	23505285	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.7922
chrX	93362092	93362146	protein_coding	Msn	utr3	ENSMUSG00000031207	ProperStrand	71	chr1	153785914	153785930	protein_coding	1700025G04Rik	intron	ENSMUSG00000032666	NonProperStrand	35	1	-14.0672
chr2	34630243	34630283	protein_coding	Hspa5	exon	ENSMUSG00000026864	ProperStrand	181	chr16	23109046	23109090	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-5.1127
chr11	20012671	20012689	protein_coding	Actr2	intron	ENSMUSG00000020152	NonProperStrand	17	chr7	29136558	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.6910
chr2	122572624	122572681	protein_coding	Pldn	utr3	ENSMUSG00000005804	ProperStrand	49	chr11	102294590	102294607	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	2	-14.7469
chr4	56910495	56910632	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	chr18	35714144	35714291	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	21	-6.8307
chr11	98868570	98870591	protein_coding	Top2a	exon	ENSMUSG00000020914	ProperStrand	324	chr4	132530100	132530117	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	1	-6.2481
chr18	68421489	68421519	protein_coding	4933403F05Rik	utr3	ENSMUSG00000038121	ProperStrand	2	chr10	80641696	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	1	-15.0012
chr12	73092726	73092743	protein_coding	Daam1	utr3	ENSMUSG00000034574	ProperStrand	13	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-12.0405
chr11	101466253	101466333	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	chr15	57978199	57978289	snoRNA	ENSMUSG00000080461_SNORA11	.	ENSMUSG00000080461	ProperStrand	171	12	-19.0649
chr4	87450323	87450413	protein_coding	Mllt3	intron	ENSMUSG00000028496	ProperStrand	2	chr4	87810686	87810776	protein_coding	BC057079	intron	ENSMUSG00000038368	NonProperStrand	6	1	-inf
chr4	135524654	135524671	protein_coding	Lypla2	utr3	ENSMUSG00000028670	ProperStrand	9	chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-10.3167
chr2	121949511	121949527	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	chr11	69483136	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	8	-7.7376
chrX	7536930	7536951	protein_coding	Gata1	exon	ENSMUSG00000031162	NonProperStrand	6	chr10	23505152	23505259	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-5.3874
chr6	124665146	124665611	protein_coding	Phb2	utr3	ENSMUSG00000004264	ProperStrand	43	chr2	26494708	26494753	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	5	-15.6581
chr15	10651783	10651819	lincRNA	4930556M19Rik	exon	ENSMUSG00000092044	NonProperStrand	1	chr2	130101985	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-inf
chr4	147833113	147836897	protein_coding	Mtor	exon	ENSMUSG00000028991	ProperStrand	65	chr4	131908275	131908355	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.3054
chr5	35195504	35195529	protein_coding	Htt	exon	ENSMUSG00000029104	ProperStrand	73	chr5	149859351	149859396	protein_coding	Hmgb1	utr3	ENSMUSG00000066551	ProperStrand	99	3	-inf
chr11	115935746	115937022	protein_coding	Unc13d	exon	ENSMUSG00000057948	ProperStrand	89	chr11	77995189	77995257	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-5.4098
chr10	75374386	75377811	protein_coding	Smarcb1	exon	ENSMUSG00000000902	ProperStrand	109	chr14	76247752	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-5.2885
chrX	12664787	12664821	protein_coding	Usp9x	intron	ENSMUSG00000031010	ProperStrand	174	chr15	79913288	79913333	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-1.7638
chr6	70794801	70794819	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chr9	65127126	65127142	protein_coding	Cilp	exon	ENSMUSG00000042254	ProperStrand	212	1	-8.8931
chr11	6523906	6523922	protein_coding	Tbrg4	exon	ENSMUSG00000000384	NonProperStrand	56	chr8	113680203	113680286	protein_coding	Glg1	utr3	ENSMUSG00000003316	ProperStrand	83	2	-19.8423
chr18	10052133	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr11	79950546	79950563	protein_coding	1110002N22Rik	utr3	ENSMUSG00000046909	ProperStrand	45	1	-9.3790
chr5	115572889	115572912	protein_coding	Unc119b	utr3	ENSMUSG00000046562	ProperStrand	20	chr2	76814107	76814133	protein_coding	Ttn	intron	ENSMUSG00000051747	ProperStrand	66	1	-15.3411
chr17	23952722	23952738	protein_coding	Srrm2	exon	ENSMUSG00000039218	ProperStrand	521	chr7	117166721	117166833	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	4	-4.9979
chr16	97990161	97990250	LINE	L1MB5	L1	chr16L1MB597990113	ProperStrand	1	chr16	97990010	97990100	SINE	B1_Mur4	Alu	chr16B1_Mur497989971	ProperStrand	1	1	-inf
chr4	55431651	55431669	lincRNA	Gm12505	exon	ENSMUSG00000087070	ProperStrand	447	chr11	49682783	49686306	protein_coding	Mapk9	exon	ENSMUSG00000020366	ProperStrand	20	1	-11.5171
chr14	30792736	30792826	protein_coding	Actr8	intron	ENSMUSG00000015971	ProperStrand	7	chr5	141212956	141213046	protein_coding	Amz1	intron	ENSMUSG00000050022	NonProperStrand	5	1	-19.9473
chr19	16214600	16214643	protein_coding	Gnaq	intron	ENSMUSG00000024639	ProperStrand	38	chr11	97642987	97643090	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	8	-inf
chr7	4584168	4584671	protein_coding	Ppp6r1	exon	ENSMUSG00000052296	ProperStrand	20	chrX	93136011	93136027	protein_coding	Las1l	exon	ENSMUSG00000057421	ProperStrand	248	1	-12.6959
chr18	39572265	39572281	protein_coding	Nr3c1	utr3	ENSMUSG00000024431	NonProperStrand	3	chr4	64785646	64785664	protein_coding	Pappa	exon	ENSMUSG00000028370	ProperStrand	65	1	-inf
chr12	114355240	114355256	protein_coding	Mta1	exon	ENSMUSG00000021144	ProperStrand	74	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-10.0068
chr9	62221456	62222528	protein_coding	Anp32a	exon	ENSMUSG00000032249	ProperStrand	75	chr10	110918593	110918683	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-5.2535
chr7	152049103	152049174	protein_coding	Fgf4	utr3	ENSMUSG00000050917	ProperStrand	66	chr9	15119646	15119736	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.4657
chr8	27267628	27267698	SINE	B3	B2	chr8B327267603	ProperStrand	1	chr13	112540780	112541440	protein_coding	Map3k1	exon	ENSMUSG00000021754	ProperStrand	113	1	-inf
chr15	77597977	77597993	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr17	12897567	12897667	protein_coding	Igf2r	exon	ENSMUSG00000023830	ProperStrand	151	1	-6.9695
chrX	90827379	90827395	protein_coding	Pola1	exon	ENSMUSG00000006678	ProperStrand	83	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-7.9443
chrX	103387387	103389780	protein_coding	Pgk1	exon	ENSMUSG00000062070	ProperStrand	484	chr11	69732703	69732730	protein_coding	Eif5a	exon	ENSMUSG00000078812	ProperStrand	164	3	-16.0498
chr6	91996608	91996629	protein_coding	Fgd5	intron	ENSMUSG00000034037	ProperStrand	38	chr3	123210853	123210929	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-4.9629
chr16	23111383	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	chr3	85942712	85942779	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	10	-2.8742
chr5	116296362	116296455	protein_coding	Cit	utr5	ENSMUSG00000029516	ProperStrand	45	chr7	86524012	86524034	protein_coding	Rlbp1	intron	ENSMUSG00000039194	NonProperStrand	1	1	-inf
chr7	116744912	116745002	protein_coding	St5	intron	ENSMUSG00000031024	NonProperStrand	6	chr7	116630188	116630278	protein_coding	Trim66	intron	ENSMUSG00000031026	ProperStrand	7	1	-19.6825
chr2	84512528	84512559	protein_coding	Tmx2	utr3	ENSMUSG00000050043	ProperStrand	31	chr1	145626057	145626172	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-10.1600
chr2	90235299	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	83226729	83226745	protein_coding	4930473A06Rik	exon	ENSMUSG00000052407	ProperStrand	19	2	-10.9135
chr5	117736251	117737509	protein_coding	Pebp1	exon	ENSMUSG00000032959	ProperStrand	54	chr13	29043776	29043792	protein_coding	Sox4	exon	ENSMUSG00000076431	ProperStrand	73	1	-13.1313
chr4	128757770	128760057	protein_coding	Rnf19b	exon	ENSMUSG00000028793	ProperStrand	7	chr10	23505156	23505236	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-5.0629
chr12	104678307	104678323	protein_coding	Ifi27l1	exon	ENSMUSG00000064215	ProperStrand	32	chr19	8963027	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.3834
chr9	63042015	63042031	protein_coding	Map2k5	exon	ENSMUSG00000058444	ProperStrand	193	chr5	74489552	74489658	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-1.7591
chrX	71517847	71517947	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	chr19	8799599	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-0.8429
chr14	35226428	35226447	protein_coding	Bmpr1a	utr3	ENSMUSG00000021796	ProperStrand	21	chr10	23505152	23505279	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-5.1197
chr18	48207132	48207177	protein_coding	Gm5506	exon	ENSMUSG00000059040	ProperStrand	105	chr4	131865856	131865946	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.9494
mmu-miR-1291	0	16	miRNA	mmu-miR-1291	.	mmu-miR-1291	ProperStrand	103	chr5	136438942	136438960	protein_coding	Srcrb4d	exon	ENSMUSG00000029699	NonProperStrand	1	1	-inf
chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr17	24343586	24343602	protein_coding	Ntn3	exon	ENSMUSG00000079662	ProperStrand	237	1	-3.8062
chr4	43505826	43505931	protein_coding	Ccdc107	intron	ENSMUSG00000028461	ProperStrand	69	chr1	195000945	195000961	protein_coding	A130010J15Rik	exon	ENSMUSG00000079144	NonProperStrand	2	2	-inf
chr2	144084829	144084887	protein_coding	Snx5	exon	ENSMUSG00000027423	ProperStrand	64	chr11	68715883	68715899	protein_coding	Rpl26	exon	ENSMUSG00000060938	ProperStrand	130	1	-11.6308
chr4	150538028	150538044	protein_coding	Camta1	exon	ENSMUSG00000014592	ProperStrand	170	chr7	119955710	119955747	protein_coding	Tead1	intron	ENSMUSG00000055320	ProperStrand	217	1	-8.6495
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr14	64829132	64829149	protein_coding	Msra	intron	ENSMUSG00000054733	NonProperStrand	84	1	-8.6952
chr12	19723413	19723432	LTR	MURVY-int	ERV1	chr12MURVY-int19718193	NonProperStrand	8	chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	1	-13.5357
chr3	21971603	21971676	SINE	ID_B1	B4	chr3ID_B121971495	ProperStrand	1	chr3	136526736	136526753	protein_coding	Ppp3ca	intron	ENSMUSG00000028161	NonProperStrand	120	1	-inf
chr5	140448406	140448423	protein_coding	Elfn1	exon	ENSMUSG00000048988	NonProperStrand	8	chr7	74189892	74189909	protein_coding	Adamts17	intron	ENSMUSG00000058145	NonProperStrand	73	1	-16.9681
chr11	6523906	6523922	protein_coding	Tbrg4	exon	ENSMUSG00000000384	NonProperStrand	56	chr4	131865855	131865895	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.8759
chr13	83720245	83720264	protein_coding	Mef2c	intron	ENSMUSG00000005583	NonProperStrand	3	chr7	52382274	52382315	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-14.6476
chr16	46569917	46570007	Other	RMER1C	Other	chr16RMER1C46569855	ProperStrand	1	chr16	46569707	46569797	SINE	B1_Mus1	Alu	chr16B1_Mus146569706	ProperStrand	1	1	-inf
chr10	68800774	68800864	protein_coding	Cdk1	utr3	ENSMUSG00000019942	ProperStrand	42	chr4	131865415	131865495	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-4.6822
chr11	116205106	116205148	protein_coding	Rnf157	intron	ENSMUSG00000052949	ProperStrand	32	chr7	52071775	52071795	protein_coding	Il4i1	utr5	ENSMUSG00000074141	ProperStrand	12	1	-17.6993
chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	2	-6.3079
chr4	117905783	117905805	protein_coding	Ptprf	intron	ENSMUSG00000033295	ProperStrand	337	chr1	43132316	43132332	protein_coding	Tgfbrap1	exon	ENSMUSG00000070939	ProperStrand	29	1	-11.3248
chr9	108400252	108400333	protein_coding	Usp19	exon	ENSMUSG00000006676	ProperStrand	57	chr7	51505822	51505854	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	1	-8.7179
chr1	162965892	162965914	non_coding	Gas5	.	ENSMUSG00000053332	ProperStrand	144	chr16	23110456	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.1231
chr1	129812289	129816157	protein_coding	Rab3gap1	exon	ENSMUSG00000036104	ProperStrand	19	chr16	23111737	23111817	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.9396
chr1	102076729	102076898	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	chr5	74489564	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	9	-11.8736
chr10	79325504	79325562	protein_coding	Ptbp1	exon	ENSMUSG00000006498	ProperStrand	129	chr11	99885311	99885327	protein_coding	Krt33b	exon	ENSMUSG00000057723	NonProperStrand	352	1	-8.2370
chr9	99484418	99484518	protein_coding	Dbr1	utr3	ENSMUSG00000032469	ProperStrand	162	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-1.8749
chr10	75970251	75971082	protein_coding	Mcm3ap	exon	ENSMUSG00000001150	ProperStrand	95	chr18	73693111	73693138	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	2	-7.6836
chr7	75371248	75371355	protein_coding	Igf1r	utr3	ENSMUSG00000005533	ProperStrand	121	chr13	51515015	51515032	protein_coding	S1pr3	exon	ENSMUSG00000067586	NonProperStrand	6	1	-16.5548
chr5	140908910	140908974	protein_coding	Eif3b	exon	ENSMUSG00000056076	ProperStrand	66	chr3	123210891	123210981	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.9131
chr7	29136530	29136568	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	chr1	59761635	59761699	snoRNA	ENSMUSG00000089093_Snord11	.	ENSMUSG00000089093	ProperStrand	193	1	-0.7063
chr3	99961887	99961953	protein_coding	Wdr3	intron	ENSMUSG00000033285	ProperStrand	30	chr4	131865856	131865946	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.9337
chr19	6060750	6060840	SINE	B1_Mur2	Alu	chr19B1_Mur26060763	ProperStrand	19	chr4	131865381	131865494	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	19	-inf
chr4	115826467	115826718	protein_coding	Pomgnt1	exon	ENSMUSG00000028700	ProperStrand	6	chr1	162965565	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-7.8657
chr11	69805217	69805269	protein_coding	Gabarap	exon	ENSMUSG00000018567	ProperStrand	24	chr10	23505581	23505606	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-9.3952
chr2	90235298	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	ProperStrand	24	chr16	11144154	11144254	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	1	-12.3152
chr15	54858828	54859959	protein_coding	Taf2	exon	ENSMUSG00000037343	ProperStrand	18	chr17	24857748	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	5	-18.2032
chr4	152998880	152998914	LINE	Lx5	L1	chr4Lx5152997729	ProperStrand	1	chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	1	-inf
chr6	35144446	35144487	protein_coding	Nup205	exon	ENSMUSG00000038759	ProperStrand	56	chr14	33005139	33005236	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	7	-19.2573
chr7	134177071	134177124	protein_coding	Kif22	exon	ENSMUSG00000030677	ProperStrand	63	chr10	23505150	23505205	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.1674
chr2	90235298	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	106335493	106335510	protein_coding	Acy1	exon	ENSMUSG00000023262	ProperStrand	9	1	-8.2671
chr17	56450134	56450181	protein_coding	Uhrf1	exon	ENSMUSG00000001228	ProperStrand	229	chr15	79249253	79249358	protein_coding	Csnk1e	utr3	ENSMUSG00000022433	ProperStrand	59	1	-10.6612
chr7	26057526	26057543	protein_coding	Cic	exon	ENSMUSG00000005442	ProperStrand	80	chr11	35622778	35623152	protein_coding	Rars	exon	ENSMUSG00000018848	ProperStrand	18	1	-15.1757
chr17	57196015	57196068	protein_coding	Slc25a23	exon	ENSMUSG00000046329	ProperStrand	6	chr1	192712615	192712631	protein_coding	Rps6kc1	exon	ENSMUSG00000089872	ProperStrand	241	1	-15.2792
chr10	80107050	80107393	protein_coding	Btbd2	exon	ENSMUSG00000003344	ProperStrand	68	chr7	134671398	134671478	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-7.6220
chr7	30231511	30231591	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	chr3	116496600	116496690	protein_coding	Agl	exon	ENSMUSG00000033400	ProperStrand	18	1	-11.2868
chr5	137403323	137403344	lincRNA	4933404O12Rik	intron	ENSMUSG00000085062	NonProperStrand	11	chr7	29136525	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-13.2861
chr2	174125966	174125982	protein_coding	Gnas	exon	ENSMUSG00000027523	ProperStrand	41	chr2	63936034	63936053	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-8.6245
chr18	33157688	33157705	protein_coding	Camk4	intron	ENSMUSG00000038128	NonProperStrand	42	chr18	73693112	73693137	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-6.2262
chrX	132673816	132673833	protein_coding	Bex4	intron	ENSMUSG00000047844	NonProperStrand	70	chr18	35716839	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.9199
chr12	86019686	86019704	protein_coding	Tmem90a	exon	ENSMUSG00000071234	ProperStrand	13	chr11	69164015	69164116	snoRNA	ENSMUSG00000087881_SCARNA21	.	ENSMUSG00000087881	ProperStrand	261	1	-13.4845
mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr2	24618093	24618110	protein_coding	Cacna1b	intron	ENSMUSG00000004113	ProperStrand	83	1	-5.2693
chr8	74490915	74490995	protein_coding	Zfp961	intron	ENSMUSG00000052446	ProperStrand	35	chr6	125071788	125071879	snoRNA	ENSMUSG00000088208_SCARNA11	.	ENSMUSG00000088208	ProperStrand	113	9	-inf
chr15	12306102	12306119	protein_coding	Pdzd2	exon	ENSMUSG00000022197	ProperStrand	21	chr5	130300460	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.4412
chr15	102266060	102266076	protein_coding	Sp1	utr3	ENSMUSG00000001280	ProperStrand	124	chr1	162965531	162965584	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.0247
chr2	33026516	33026534	protein_coding	Ralgps1	intron	ENSMUSG00000038831	ProperStrand	75	chr11	68886964	68887038	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-3.7255
chr5	115848210	115848227	antisense	Gm13832	.	ENSMUSG00000087292	ProperStrand	47	chr2	130103432	130103502	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-8.5528
chr4	126425862	126425934	protein_coding	Ncdn	exon	ENSMUSG00000028833	ProperStrand	35	chrX	54751845	54751861	protein_coding	Gpr101	utr3	ENSMUSG00000036357	ProperStrand	24	1	-16.2740
chr13	74494656	74494674	protein_coding	Ccdc127	utr3	ENSMUSG00000021578	NonProperStrand	54	chr9	120039581	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.5118
chr10	87816411	87816430	protein_coding	Dram1	intron	ENSMUSG00000020057	ProperStrand	24	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-10.7783
chr11	11894813	11894903	protein_coding	Grb10	intron	ENSMUSG00000020176	NonProperStrand	159	chr6	52146738	52146818	protein_coding	RP23-103L13.8	intron	ENSMUSG00000093412	ProperStrand	2	1	-19.5395
chr7	16524606	16524882	protein_coding	Gltscr2	exon	ENSMUSG00000041560	ProperStrand	127	chr17	24857720	24857810	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.1595
chr4	53863378	53867194	protein_coding	Tmem38b	exon	ENSMUSG00000028420	ProperStrand	22	chr3	123210887	123210977	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.8504
chr17	35296088	35296132	protein_coding	Prrc2a	exon	ENSMUSG00000024393	ProperStrand	315	chrY	581857	581874	protein_coding	Uty	exon	ENSMUSG00000068457	ProperStrand	26	1	-11.6812
chr9	12326022	12326112	LTR	RLTR13B1	ERVK	chr9RLTR13B112325199	NonProperStrand	1	chr9	12326140	12326220	LTR	RLTR1D	ERV1	chr9RLTR1D12326089	ProperStrand	1	1	-inf
chr13	48987273	48987383	protein_coding	Fam120a	exon	ENSMUSG00000038014	ProperStrand	76	chr13	49779721	49779746	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-6.5448
chr4	122968585	122968685	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	chr19	8799603	8799645	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-0.6940
chr3	83981673	83981689	protein_coding	Trim2	exon	ENSMUSG00000027993	ProperStrand	10	chr4	63076592	63076643	protein_coding	Whrn	exon	ENSMUSG00000039137	ProperStrand	20	1	-18.7347
chr1	163243773	163243799	LTR	RLTR1B-int	ERV1	chr1RLTR1B-int163243771	NonProperStrand	1	chr16	23110962	23110985	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr4	65114818	65114834	protein_coding	Astn2	intron	ENSMUSG00000028373	ProperStrand	18	chr9	41854683	41854734	protein_coding	Sorl1	exon	ENSMUSG00000049313	ProperStrand	112	1	-14.5129
chr11	51800293	51800309	protein_coding	Ube2b	exon	ENSMUSG00000020390	ProperStrand	57	chr1	162965531	162965587	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.3697
chr7	88529497	88529520	protein_coding	Cpeb1	intron	ENSMUSG00000025586	NonProperStrand	29	chr9	120039616	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-7.8041
chr9	108877417	108877433	protein_coding	Col7a1	exon	ENSMUSG00000025650	NonProperStrand	7	chr17	35299507	35299642	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-9.1314
chr5	115848210	115848227	antisense	Gm13832	.	ENSMUSG00000087292	ProperStrand	47	chr11	106362640	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-7.8924
chr13	28237769	28237786	protein_coding	Prl5a1	intron	ENSMUSG00000017064	NonProperStrand	1	chr16	30274442	30274474	protein_coding	Lrrc15	exon	ENSMUSG00000052316	ProperStrand	2	1	-inf
chr12	86561162	86561178	protein_coding	Eif2b2	exon	ENSMUSG00000004788	ProperStrand	15	chr8	73032283	73032342	protein_coding	2810422J05Rik	exon	ENSMUSG00000055553	ProperStrand	171	1	-14.0284
chr2	71665988	71671769	protein_coding	Itga6	exon	ENSMUSG00000027111	ProperStrand	54	chr5	74489597	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-3.9754
chr5	105908895	105908938	protein_coding	Lrrc8b	exon	ENSMUSG00000070639	ProperStrand	4	chr11	62418053	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-11.1873
chr1	162966203	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-0.9023
chr4	115164807	115164823	protein_coding	Cyp4a14	exon	ENSMUSG00000028715	ProperStrand	14	chr13	23646968	23647004	protein_coding	Hist1h1d	exon	ENSMUSG00000052565	ProperStrand	78	1	-15.7586
chr11	50194126	50194182	protein_coding-noncoding	Hnrnph1	utr5	ENSMUSG00000007850	ProperStrand	13	chr12	88778631	88778720	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	3	-20.9731
chr18	58105378	58105417	protein_coding	Slc12a2	utr3	ENSMUSG00000024597	ProperStrand	20	chr16	23110923	23110941	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-3.0614
chr9	7184842	7186817	protein_coding	Dcun1d5	exon	ENSMUSG00000032002	ProperStrand	3	chr12	60141409	60141489	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	2	-inf
chr6	92104375	92104391	protein_coding	Nr2c2	exon	ENSMUSG00000005893	ProperStrand	101	chr12	17552964	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-4.0931
chr14	55504791	55504841	protein_coding	Bcl2l2	utr3	ENSMUSG00000089682	ProperStrand	17	chr4	131908688	131908749	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-8.4805
chr17	46861595	46861611	protein_coding	Pex6	exon	ENSMUSG00000002763	ProperStrand	292	chr11	62418013	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-2.6089
chr2	26767622	26767918	protein_coding	Rpl7a	exon	ENSMUSG00000062647	ProperStrand	234	chr11	69481393	69481473	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-1.0414
chr8	28142433	28142760	protein_coding	Erlin2	exon	ENSMUSG00000031483	ProperStrand	14	chr4	131908254	131908344	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.9265
chr11	95823823	95823913	protein_coding	Igf2bp1	utr3	ENSMUSG00000013415	ProperStrand	140	chr16	18240842	18240922	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	1	-7.4344
chr7	80864200	80864222	LINE	Lx6	L1	chr7Lx680864157	NonProperStrand	8	chr7	148140831	148140906	protein_coding	Ifitm2	utr3	ENSMUSG00000060591	ProperStrand	25	2	-19.7102
chr5	73931317	73931407	protein_coding	Dcun1d4	intron	ENSMUSG00000051674	ProperStrand	5	chr3	108357409	108357489	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-9.6221
chr3	146902784	146902864	LINE	Lx3_Mus	L1	chr3Lx3_Mus146902679	NonProperStrand	2	chr11	30649823	30649913	LTR	BGLII_B	ERVK	chr11BGLII_B30649776	ProperStrand	1	1	-inf
chr8	86452335	86452408	protein_coding	Lphn1	intron	ENSMUSG00000013033	ProperStrand	221	chr18	35714149	35714239	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	3	-3.8939
chr5	92497514	92502193	protein_coding	G3bp2	exon	ENSMUSG00000029405	ProperStrand	78	chr1	162965559	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.8070
chr15	77597977	77597993	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr1	88247816	88247876	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-1.2009
chr6	54541422	54541440	protein_coding	Fkbp14	intron	ENSMUSG00000038074	ProperStrand	3	chr11	106362637	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-13.7636
chr15	51809619	51809719	protein_coding	Rad21	exon	ENSMUSG00000022314	ProperStrand	85	chr16	87419190	87419268	snoRNA	ENSMUSG00000065647_SNORA2	.	ENSMUSG00000065647	ProperStrand	123	1	-11.1718
chr7	51141050	51141067	protein_coding	Klk4	utr3	ENSMUSG00000006948	NonProperStrand	3	chr3	123210949	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-8.0648
chr15	28012576	28012666	LTR	ORR1E	MaLR	chr15ORR1E28012517	NonProperStrand	1	chr15	28012782	28012872	Simple_repeat	(TTCC)n	Simple_repeat	chr15(TTCC)n28012722	NonProperStrand	1	1	-inf
chr10	80641506	80641606	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr10	43325728	43325745	protein_coding	F930017D23Rik	intron	ENSMUSG00000075184	NonProperStrand	4	1	-11.7428
chr15	76371908	76371925	protein_coding	Slc52a2	utr3	ENSMUSG00000022560	NonProperStrand	25	chr15	102318695	102319214	protein_coding	Pcbp2	exon	ENSMUSG00000056851	ProperStrand	164	1	-13.0687
chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	chr8	32260335	32260406	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	2	-5.3614
chr5	77710327	77710371	protein_coding	Rest	exon	ENSMUSG00000029249	ProperStrand	136	chr10	80641714	80641752	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	2	-9.6407
chr2	91769871	91769912	protein_coding	Chrm4	utr3	ENSMUSG00000040495	ProperStrand	6	chr11	69483189	69483279	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-6.9324
chr2	32817340	32818096	protein_coding	Rpl12	exon	ENSMUSG00000038900	ProperStrand	167	chr19	8963027	8963065	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-0.8060
chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	chr2	144087380	144087463	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-2.6558
chr1	120575336	120575426	protein_coding	Tfcp2l1	utr3	ENSMUSG00000026380	ProperStrand	158	chr7	116663634	116663714	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.0416
chr2	158185586	158185666	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr4	132394365	132394455	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	1	-2.5605
chr12	72087915	72089451	protein_coding	Psma3	exon	ENSMUSG00000060073	ProperStrand	20	chr16	87419196	87419295	snoRNA	ENSMUSG00000065647_SNORA2	.	ENSMUSG00000065647	ProperStrand	123	1	-14.1041
chr9	63868722	63868739	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	chr11	120488421	120488487	protein_coding	Mafg	utr3	ENSMUSG00000051510	ProperStrand	23	1	-10.5239
chr10	127521221	127521271	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	chr9	40612898	40612921	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	1	-5.0807
chr7	137812904	137812921	protein_coding	Tacc2	intron	ENSMUSG00000030852	ProperStrand	95	chr5	121655099	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.9119
chr4	155013928	155014018	protein_coding	Cdk11b	exon	ENSMUSG00000029062	ProperStrand	92	chr19	8963042	8963084	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.5964
chr12	85942265	85942345	SINE	B1_Mur1	Alu	chr12B1_Mur185942265	ProperStrand	1	chr12	85942455	85942545	SINE	B1_Mus1	Alu	chr12B1_Mus185942428	ProperStrand	1	1	-inf
chr2	29728434	29728479	protein_coding	Cercam	exon	ENSMUSG00000039787	ProperStrand	4	chr18	35102298	35102366	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	2	-19.1993
chr13	21536172	21536281	protein_coding	Zfp187	utr3	ENSMUSG00000022228	ProperStrand	7	chr7	118219574	118219673	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	5	-inf
chr15	76734812	76734861	protein_coding	Rpl8	exon	ENSMUSG00000003970	ProperStrand	191	chr19	43579408	43579425	protein_coding	Got1	intron	ENSMUSG00000025190	NonProperStrand	147	1	-9.1941
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr5	108334240	108336490	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	2	-2.6232
chr15	36526319	36526720	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr17	28465927	28465950	protein_coding	Rpl10a	exon	ENSMUSG00000037805	ProperStrand	121	1	-6.4902
chr12	74652492	74652512	LTR	RLTRETN_Mm	ERVK	chr12RLTRETN_Mm74652322	ProperStrand	9	chr2	121949510	121949527	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	1	-14.1884
chr1	182824866	182824956	protein_coding	Lefty2	exon	ENSMUSG00000066652	ProperStrand	48	chr4	131866155	131866235	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-4.0833
chr17	75790277	75790293	protein_coding	Ltbp1	utr3	ENSMUSG00000001870	NonProperStrand	66	chrX	7499317	7499340	protein_coding	Pcsk1n	exon	ENSMUSG00000039278	ProperStrand	3	1	-20.1561
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	7	-7.8594
chr1	36125588	36125688	protein_coding	Hs6st1	exon	ENSMUSG00000045216	ProperStrand	63	chr11	62416964	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-5.9471
chr3	135268102	135268121	protein_coding	Nfkb1	exon	ENSMUSG00000028163	ProperStrand	55	chr18	89387605	89387621	protein_coding	Cd226	intron	ENSMUSG00000034028	ProperStrand	47	1	-13.9854
chr1	140440919	140458327	protein_coding	Nek7	exon	ENSMUSG00000026393	ProperStrand	10	chr12	88778723	88778766	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	2	-16.1056
chr4	128855566	128857438	protein_coding	S100pbp	exon	ENSMUSG00000040928	NonProperStrand	13	chr18	33954881	33954948	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-10.5963
chr9	96976765	96976865	protein_coding	Slc25a36	utr3	ENSMUSG00000032449	ProperStrand	159	chr10	90644839	90644876	tRNA	tRNA856-AspGTC	.	829080	ProperStrand	65	1	-11.1965
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr9	15120987	15121087	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	1	-2.9539
chr19	44646046	44646073	protein_coding	Hif1an	utr3	ENSMUSG00000036450	ProperStrand	16	chr18	35714245	35714276	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-5.9996
chr1	188792918	188792982	protein_coding	D1Pas1	exon	ENSMUSG00000039224	ProperStrand	5	chr8	113362428	113362492	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	2	-19.3209
chr12	113895191	113895283	protein_coding	Akt1	exon	ENSMUSG00000001729	ProperStrand	9	chr15	79908956	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-9.3140
chr7	133317757	133343446	protein_coding	Xpo6	utr5	ENSMUSG00000000131	ProperStrand	36	chr2	166890503	166890560	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	2	-13.6667
chr17	24293010	24293545	protein_coding	Amdhd2	exon	ENSMUSG00000036820	ProperStrand	11	chr1	162965981	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	4	-inf
chr7	148507011	148507861	protein_coding	Deaf1	exon	ENSMUSG00000058886	ProperStrand	23	chr1	162967516	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-5.3087
chr6	38459161	38459225	protein_coding	Ubn2	utr3	ENSMUSG00000038538	ProperStrand	86	chr15	79908931	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-4.7747
chr15	35423357	35423459	protein_coding	Vps13b	intron	ENSMUSG00000037646	ProperStrand	56	chr1	162967495	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	5	-15.2262
chr1	155329885	155329965	protein_coding	Dhx9	exon	ENSMUSG00000042699	ProperStrand	98	chr2	26493383	26493473	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-2.8522
chr1	89603485	89603514	protein_coding	Inpp5d	intron	ENSMUSG00000026288	ProperStrand	75	chr4	131908236	131908284	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.1121
mmu-miR-6240	4	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr18	80403573	80403589	protein_coding	Txnl4a	utr5	ENSMUSG00000057130	ProperStrand	44	1	-6.5166
chr1	74680632	74680648	protein_coding	Stk36	exon	ENSMUSG00000033276	NonProperStrand	4	chr19	32022964	32022984	protein_coding	A1cf	utr3	ENSMUSG00000052595	NonProperStrand	8	1	-19.3161
chr17	27890491	27890524	protein_coding	D17Wsu92e	utr3	ENSMUSG00000056692	ProperStrand	61	chr11	69483136	69483228	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.4217
chr5	33715261	33715351	protein_coding	Maea	utr3	ENSMUSG00000079562	ProperStrand	32	chr5	121655017	121655097	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	3	-11.7493
chr6	113067496	113067576	protein_coding	Setd5	exon	ENSMUSG00000034269	ProperStrand	162	chr3	123210876	123210966	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-0.6999
chr17	71901663	71901680	pseudogene	Mettl4-ps1	.	ENSMUSG00000079356	ProperStrand	1	chr5	135529857	135529957	snoRNA	ENSMUSG00000088008_SCARNA20	.	ENSMUSG00000088008	ProperStrand	139	1	-inf
chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	chr7	117189863	117189884	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-1.5470
chr14	58458571	58458610	protein_coding	Zdhhc20	intron	ENSMUSG00000021969	ProperStrand	10	chr3	123210854	123210877	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.4047
chr12	93071614	93080096	protein_coding	Sel1l	exon	ENSMUSG00000020964	ProperStrand	27	chr9	59526799	59526844	protein_coding	Pkm2	utr3	ENSMUSG00000032294	ProperStrand	1296	1	-8.7819
chr5	136386948	136387038	protein_coding	Ywhag	exon	ENSMUSG00000051391	ProperStrand	142	chr10	110918550	110918630	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-1.9595
chr7	148378859	148379744	protein_coding	Hras1	utr5	ENSMUSG00000025499	ProperStrand	17	chr4	131908804	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.3002
chr19	59055978	59056078	protein_coding	4930506M07Rik	intron	ENSMUSG00000041362	ProperStrand	36	chr7	29136636	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.2650
chr3	96528184	96528274	snoRNA	ENSMUSG00000065669_SNORA5	.	ENSMUSG00000065669	ProperStrand	180	chr3	108357364	108357444	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-2.5328
chr6	125112079	125112236	protein_coding	Gapdh	exon	ENSMUSG00000057666	ProperStrand	356	chr17	24665451	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-1.7633
chr9	70960077	70960093	protein_coding	Aqp9	exon	ENSMUSG00000032204	NonProperStrand	118	chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	1	-7.2446
chr2	156113677	156113713	protein_coding	Phf20	exon	ENSMUSG00000038116	ProperStrand	60	chr11	51551280	51551333	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	1	-7.6994
chr9	120330178	120330199	protein_coding	Myrip	intron	ENSMUSG00000041794	ProperStrand	25	chr4	131908689	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-6.9248
chr2	80421266	80421355	protein_coding	Nckap1	utr5	ENSMUSG00000027002	ProperStrand	21	chr14	47808947	47808963	protein_coding	Gch1	utr5	ENSMUSG00000037580	NonProperStrand	31	1	-16.6937
chr6	92758314	92758345	protein_coding	Adamts9	intron	ENSMUSG00000030022	ProperStrand	27	chr16	23111738	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-11.2925
chr6	88446488	88446540	protein_coding	Ruvbl1	intron	ENSMUSG00000030079	ProperStrand	24	chr7	26452939	26452991	protein_coding	Exosc5	utr3	ENSMUSG00000061286	ProperStrand	16	3	-20.5615
chr7	139833256	139834171	protein_coding	Lhpp	exon	ENSMUSG00000030946	ProperStrand	35	chr2	26494780	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.1058
chr5	32418425	32418443	LINE	L1MC4	L1	chr5L1MC432418424	ProperStrand	1	chr4	127007838	127007909	protein_coding	Gjb3	utr5	ENSMUSG00000042367	ProperStrand	4	1	-inf
chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	chr8	86535304	86535320	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	1	-8.4024
chr9	65049532	65049622	snRNA	ENSMUSG00000075930_U5	.	ENSMUSG00000075930	ProperStrand	175	chr9	15119668	15119748	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-0.9996
chr14	70076654	70076734	protein_coding	Loxl2	intron	ENSMUSG00000034205	ProperStrand	28	chr17	13112504	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	6	-19.3957
chr14	61984938	61985028	protein_coding	Kpna3	utr3	ENSMUSG00000021929	ProperStrand	14	chr9	120038468	120038548	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-9.5947
chr10	127521400	127525447	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr4	131908236	131908453	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	9	-0.7127
chr11	69483232	69484337	protein_coding-noncoding	Eif4a1	utr3	ENSMUSG00000059796	ProperStrand	68	chr4	131908689	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	12	-20.0751
chrX	70500564	70500646	protein_coding	Xlr3c	utr3	ENSMUSG00000058147	ProperStrand	1	chr18	73693161	73693191	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-inf
chr5	144519350	144519366	lincRNA	D130017N08Rik	exon	ENSMUSG00000087189	ProperStrand	2	chr7	116663633	116663723	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-inf
chr13	30338191	30338207	protein_coding	Mboat1	utr3	ENSMUSG00000038732	NonProperStrand	148	chr2	130103751	130103804	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-6.6760
chr5	123318320	123318336	protein_coding	Rnf34	utr3	ENSMUSG00000029474	ProperStrand	15	chr1	162965533	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-9.7660
chr5	34828601	34828687	protein_coding	Fam193a	utr3	ENSMUSG00000037210	ProperStrand	41	chr5	121655030	121655120	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.4679
chr2	121282863	121282879	protein_coding	2310003F16Rik	exon	ENSMUSG00000027245	ProperStrand	40	chr9	120038466	120038519	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.7827
chr2	90235315	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr16	21546912	21546929	protein_coding	Vps8	intron	ENSMUSG00000033653	ProperStrand	27	1	-6.0220
chr11	22856637	22882113	protein_coding	Commd1	exon	ENSMUSG00000051355	ProperStrand	36	chr7	116663673	116663753	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.4225
chr18	35716855	35716886	lincRNA	Snhg4	intron	ENSMUSG00000090430	ProperStrand	270	chr15	98356819	98356913	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	1	-4.8016
chr16	18399223	18399750	protein_coding	Arvcf	exon	ENSMUSG00000000325	ProperStrand	28	chr5	121655127	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.2085
chr2	160774791	160774858	protein_coding	Chd6	utr3	ENSMUSG00000057133	ProperStrand	104	chr17	24857719	24857809	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	4	-5.9867
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	148113281	148113297	protein_coding	Cdx2	utr3	ENSMUSG00000029646	ProperStrand	276	2	-3.2390
chr9	110844930	110845090	protein_coding	Tdgf1	exon	ENSMUSG00000032494	ProperStrand	218	chr2	167475429	167475467	protein_coding	Gm20431	intron	ENSMUSG00000089739	ProperStrand	81	2	-15.9714
chr10	62802344	62802360	protein_coding	Sirt1	intron	ENSMUSG00000020063	NonProperStrand	116	chr17	23953085	23953135	protein_coding	Srrm2	exon	ENSMUSG00000039218	ProperStrand	521	1	-7.6702
chrX	156315497	156315519	protein_coding	Sh3kbp1	intron	ENSMUSG00000040990	ProperStrand	67	chr19	8798487	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-4.9975
chr6	69657216	69657233	LTR	IAPEz-int	ERVK	chr6IAPEz-int69657165	NonProperStrand	42	chr2	26494788	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.7619
chr8	69227956	69227974	protein_coding	Npy1r	exon	ENSMUSG00000036437	ProperStrand	13	chr11	69483237	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-5.3217
chr4	76614453	76614470	protein_coding	Ptprd	intron	ENSMUSG00000028399	ProperStrand	198	chr9	15119651	15119699	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-0.8510
chr2	52956316	52956332	protein_coding	Fmnl2	exon	ENSMUSG00000036053	ProperStrand	35	chr5	105948463	105948481	protein_coding	Lrrc8c	utr5	ENSMUSG00000054720	ProperStrand	5	1	-18.8685
chr4	74760121	74760138	LTR	RLTR12B	ERVK	chr4RLTR12B74759916	ProperStrand	5	chr15	102151187	102152791	protein_coding	Espl1	exon	ENSMUSG00000058290	ProperStrand	172	1	-16.3034
chr15	34371034	34371071	protein_coding	Rpl30	exon	ENSMUSG00000058600	ProperStrand	65	chr4	116826700	116826753	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-6.6228
chr8	87340233	87340249	protein_coding	Dand5	exon	ENSMUSG00000053226	ProperStrand	34	chr11	106362568	106362635	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-8.5432
chr2	101741381	101741471	protein_coding	Commd9	utr3	ENSMUSG00000027163	ProperStrand	4	chr4	122970400	122970480	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-13.0811
chr10	126628050	126628066	protein_coding	Dtx3	exon	ENSMUSG00000040415	ProperStrand	5	chr2	26768368	26768420	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-10.7233
chr12	56404814	56404830	protein_coding	1110008L16Rik	utr5	ENSMUSG00000021023	NonProperStrand	10	chr16	23110827	23110860	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.7978
chr12	3467464	3467544	protein_coding	Asxl2	intron	ENSMUSG00000037486	NonProperStrand	12	chr12	3467523	3467613	protein_coding	Asxl2	intron	ENSMUSG00000037486	ProperStrand	21	1	-18.6634
chr19	40646050	40646090	protein_coding	Aldh18a1	intron	ENSMUSG00000025007	ProperStrand	19	chr11	68886932	68887022	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-6.3948
chr1	108496590	108496607	protein_coding	Bcl2	intron	ENSMUSG00000057329	NonProperStrand	9	chr11	77995229	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-10.0406
chr19	10934228	10934686	protein_coding	Tmem132a	exon	ENSMUSG00000024736	ProperStrand	26	chr16	23110914	23110994	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.2392
chr14	34907593	34907918	protein_coding	Anxa8	exon	ENSMUSG00000021950	ProperStrand	26	chr1	162968442	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-7.7477
chr9	64023005	64025567	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	chr4	131865856	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	11	-2.5222
chr18	10052129	10052153	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr2	25915656	25915672	protein_coding	Nacc2	exon	ENSMUSG00000026932	ProperStrand	98	1	-7.8205
chr14	20960082	20960208	protein_coding	Kcnk5	utr3	ENSMUSG00000023243	ProperStrand	29	chr7	20310054	20310070	protein_coding	Pvrl2	exon	ENSMUSG00000062300	ProperStrand	110	1	-13.5727
chr13	28653437	28700391	lincRNA	2610307P16Rik	exon	ENSMUSG00000085936	ProperStrand	154	chr11	62418008	62418044	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	1	-7.0929
chr8	88364701	88364791	protein_coding	Itfg1	utr5	ENSMUSG00000031703	ProperStrand	38	chr2	158182191	158182271	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	14	-inf
chr19	8799829	8799897	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	chr8	73419656	73419783	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	50	-15.7963
chr2	121131858	121131879	protein_coding	Mtap1a	exon	ENSMUSG00000027254	ProperStrand	17	chr2	154171683	154171700	protein_coding	Cdk5rap1	exon	ENSMUSG00000027487	ProperStrand	75	1	-15.4327
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr10	23505150	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	28	-2.2503
chr17	36065196	36065215	protein_coding	Ppp1r10	exon	ENSMUSG00000039220	ProperStrand	45	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-9.1974
chr1	53219102	53219119	protein_coding	1700019A02Rik	intron	ENSMUSG00000060715	ProperStrand	23	chr4	131908809	131908896	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.7500
chr5	77343920	77343969	protein_coding	Ppat	utr3	ENSMUSG00000029246	ProperStrand	55	chr15	79908952	79908993	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-5.6429
chr2	34228440	34228456	protein_coding	Pbx3	intron	ENSMUSG00000038718	ProperStrand	8	chr7	29136525	29136579	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-6.2203
chr11	6520341	6520441	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	NonProperStrand	6	chr3	123210892	123210979	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	NonProperStrand	45	1	-18.1260
chrX	161886235	161886253	LTR	RLTR27	ERVK	chrXRLTR27161886238	NonProperStrand	1	chr11	69481393	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-inf
chr19	60950361	60950394	protein_coding	Prdx3	utr5	ENSMUSG00000024997	ProperStrand	4	chr4	131865952	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.0048
chr11	48614367	48614420	snoRNA	ENSMUSG00000064500_SNORD95	.	ENSMUSG00000064500	ProperStrand	100	chr1	63225680	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-5.6625
chr11	115712203	115712391	protein_coding	Llgl2	exon	ENSMUSG00000020782	ProperStrand	62	chr11	62416974	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-5.9786
chr11	60001911	60001927	protein_coding	Rai1	exon	ENSMUSG00000062115	NonProperStrand	81	chr14	33005138	33005238	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-3.4363
chr5	65191385	65191411	LTR	ORR1D2-int	MaLR	chr5ORR1D2-int65191086	ProperStrand	1	chr1	75484537	75484553	protein_coding	Obsl1	exon	ENSMUSG00000026211	NonProperStrand	192	1	-inf
chr9	44626617	44626633	protein_coding	Mll1	exon	ENSMUSG00000002028	ProperStrand	151	chr15	34370545	34370639	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-1.9490
chr17	28303989	28304017	protein_coding	Scube3	exon	ENSMUSG00000038677	ProperStrand	13	chr8	73419682	73419772	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-6.0818
mmu-miR-6240	8	25	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr7	150755314	150755389	protein_coding	Cars	exon	ENSMUSG00000010755	ProperStrand	62	3	-13.4949
chr1	155077931	155077977	protein_coding	Lamc1	exon	ENSMUSG00000026478	ProperStrand	239	chr4	153410349	153410365	protein_coding	Ccdc27	exon	ENSMUSG00000039492	ProperStrand	94	1	-9.6408
chr11	79509119	79509180	protein_coding	Rab11fip4	utr3	ENSMUSG00000017639	ProperStrand	30	chr2	79857441	79857458	protein_coding	Pde1a	intron	ENSMUSG00000059173	ProperStrand	5	1	-19.3173
chr15	76174063	76174108	protein_coding	Cyc1	exon	ENSMUSG00000022551	ProperStrand	47	chr18	33954846	33954948	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-3.9604
chr3	55059936	55059952	protein_coding	Dclk1	exon	ENSMUSG00000027797	ProperStrand	6	chr11	6428108	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-7.7732
chr14	55262798	55262888	protein_coding	Acin1	exon	ENSMUSG00000022185	ProperStrand	67	chr4	131908717	131908797	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.0774
mmu-miR-1949	0	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr2	152102686	152102758	protein_coding	Csnk2a1	exon	ENSMUSG00000074698	ProperStrand	91	1	-7.3186
chr4	116291571	116295418	protein_coding	Nasp	exon	ENSMUSG00000028693	ProperStrand	64	chr4	131908810	131908867	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-3.5594
chr11	78038118	78038812	protein_coding	Supt6h	exon	ENSMUSG00000002052	ProperStrand	119	chr18	60936180	60936588	protein_coding	Rps14	exon	ENSMUSG00000024608	ProperStrand	154	2	-15.8351
chr4	76614453	76614470	protein_coding	Ptprd	intron	ENSMUSG00000028399	ProperStrand	198	chr7	52382753	52382832	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-4.4275
chr19	5940778	5940858	protein_coding	Pola2	utr3	ENSMUSG00000024833	ProperStrand	29	chr6	71832592	71832682	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-7.0530
chr11	97583694	97605330	protein_coding	Pip4k2b	intron	ENSMUSG00000018547	ProperStrand	46	chr4	131908689	131908767	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-2.9958
chr1	88423322	88423408	protein_coding	Ptma	utr5	ENSMUSG00000026238	ProperStrand	385	chr11	83107806	83107864	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	1	-5.1660
chr2	90235294	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr18	67884132	67884148	protein_coding	Ptpn2	exon	ENSMUSG00000024539	ProperStrand	35	1	-5.5085
chr9	59411768	59412691	protein_coding	Hexa	exon	ENSMUSG00000025232	ProperStrand	12	chr1	162965530	162965584	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-10.4811
chr11	70539695	70539795	protein_coding	Kif1c	exon	ENSMUSG00000020821	ProperStrand	26	chr9	30235085	30235102	protein_coding	Snx19	exon	ENSMUSG00000031993	ProperStrand	353	1	-11.4540
chr4	151391241	151391349	protein_coding	Klhl21	utr3	ENSMUSG00000073700	ProperStrand	16	chr12	60774072	60774112	snoRNA	ENSMUSG00000077603_SNORA3	.	ENSMUSG00000077603	ProperStrand	185	1	-13.7424
chr10	54606107	54606126	LTR	RMER6B	ERVK	chr10RMER6B54606016	NonProperStrand	1	chr16	23111734	23111825	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	NonProperStrand	47	1	-inf
chr12	109427366	109427404	protein_coding	Ccnk	exon	ENSMUSG00000021258	ProperStrand	31	chr4	131908252	131908342	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.4690
chr7	117189954	117190044	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	NonProperStrand	17	chr9	120039534	120039614	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	NonProperStrand	24	2	-19.8695
chr1	133141328	133141345	protein_coding	Rassf5	exon	ENSMUSG00000026430	ProperStrand	73	chr5	74489587	74489677	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-3.4156
chr17	35971894	35971994	protein_coding	Tubb5	utr3	ENSMUSG00000001525	ProperStrand	624	chr11	6428035	6428118	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	11	-8.6550
chrX	11657023	11657039	protein_coding	Bcor	utr5	ENSMUSG00000040363	NonProperStrand	293	chr16	23111754	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-0.8503
chr7	28146782	28146798	protein_coding	Spnb4	exon	ENSMUSG00000011751	NonProperStrand	84	chr7	117189865	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	12	-inf
chr8	87787237	87787327	protein_coding	Vps35	exon	ENSMUSG00000031696	ProperStrand	27	chr16	23110914	23110994	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.1875
chr11	101024121	101024167	protein_coding	Plekhh3	utr3	ENSMUSG00000035172	ProperStrand	2	chr1	89681248	89681348	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-12.8594
chr11	76800117	76800187	protein_coding	Blmh	utr3	ENSMUSG00000020840	ProperStrand	70	chr9	15119665	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.3660
chr14	32479927	32479943	protein_coding	Btd	exon	ENSMUSG00000021900	NonProperStrand	74	chr15	34370614	34370665	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-3.1665
chr11	51781346	51781386	protein_coding	Cdkn2aipnl	exon	ENSMUSG00000020392	ProperStrand	18	chr12	36748865	36748883	protein_coding	Tspan13	intron	ENSMUSG00000020577	NonProperStrand	7	1	-20.3004
chr5	123243535	123264572	protein_coding	Anapc5	exon	ENSMUSG00000029472	ProperStrand	92	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	8	-4.3094
chr9	44184928	44185008	SINE	B2_Mm2	B2	chr9B2_Mm244184816	ProperStrand	1	chr9	44185374	44185464	SINE	B2_Mm2	B2	chr9B2_Mm244185297	ProperStrand	1	1	-inf
chr8	127998772	127998872	protein_coding	Sipa1l2	exon	ENSMUSG00000001995	ProperStrand	37	chr18	49883855	49888080	protein_coding	Dtwd2	exon	ENSMUSG00000024505	ProperStrand	11	1	-17.6760
chr10	112365815	112365847	protein_coding	Atxn7l3b	utr5	ENSMUSG00000074748	ProperStrand	18	chr16	23111777	23111816	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.0433
chr14	108986504	108986521	LTR	MTE-int	MaLR	chr14MTE-int108986408	ProperStrand	32	chr6	71832629	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-6.8557
chr5	111292294	111292365	protein_coding	Chek2	exon	ENSMUSG00000029521	ProperStrand	4	chr19	8799054	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	2	-18.3151
chr2	17963331	17963347	protein_coding	2810030E01Rik	intron	ENSMUSG00000054074	ProperStrand	15	chr4	131908700	131908751	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.5353
chr17	24615989	24616006	protein_coding	Mlst8	utr5	ENSMUSG00000024142	NonProperStrand	40	chr17	57032737	57032798	protein_coding	Mllt1	utr3	ENSMUSG00000024212	ProperStrand	19	1	-16.4981
chr3	65184216	65184306	protein_coding	Ssr3	utr3	ENSMUSG00000027828	ProperStrand	24	chr11	97642994	97643074	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.1417
chr6	87795233	87795251	protein_coding	Cnbp	exon	ENSMUSG00000030057	ProperStrand	46	chr12	112779192	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-5.2914
chr7	13613254	13613354	protein_coding-noncoding	Trim28	utr5	ENSMUSG00000005566	ProperStrand	16	chr16	23110456	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	13	-19.3871
chr17	17531390	17531406	lincRNA	Gm16957	intron	ENSMUSG00000087696	ProperStrand	1	chr16	23110940	23110957	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr11	69726676	69726729	protein_coding	Neurl4	exon	ENSMUSG00000047284	ProperStrand	28	chr2	113038488	113038504	protein_coding	Ryr3	intron	ENSMUSG00000057378	NonProperStrand	24	1	-16.6767
chr7	133592210	133592226	protein_coding	Atp2a1	exon	ENSMUSG00000030730	ProperStrand	49	chr5	108336363	108336406	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-5.2741
chr17	34324656	34324673	protein_coding	Psmb9	utr5	ENSMUSG00000024337	ProperStrand	60	chr10	23505603	23505626	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-7.5501
chr16	90934241	90934262	protein_coding	1110004E09Rik	intron	ENSMUSG00000022972	ProperStrand	8	chr9	15119288	15119385	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	3	-19.2623
chr11	6520321	6520411	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	chr16	43886794	43886874	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	1	-2.7149
chr2	90235313	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	41311241	41311268	protein_coding	Tm9sf3	intron	ENSMUSG00000025016	NonProperStrand	3	1	-10.7414
chr10	80607755	80607834	protein_coding	Zbtb7a	exon	ENSMUSG00000035011	ProperStrand	39	chr4	96412508	96412526	protein_coding	Gm12695	intron	ENSMUSG00000078639	ProperStrand	110	1	-12.9657
chr3	138405311	138405328	protein_coding	Tspan5	utr5	ENSMUSG00000028152	NonProperStrand	5	chr16	11753769	11753786	protein_coding	Snx29	intron	ENSMUSG00000071669	NonProperStrand	38	1	-18.4585
chr10	12642385	12642401	lincRNA	B230208H11Rik	exon	ENSMUSG00000085233	ProperStrand	21	chr10	23505150	23505199	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.9252
chr4	85016349	85016365	protein_coding	Sh3gl2	intron	ENSMUSG00000028488	NonProperStrand	313	chr9	119176286	119176333	protein_coding	Oxsr1	exon	ENSMUSG00000036737	ProperStrand	33	1	-11.2096
chr2	168426891	168426911	protein_coding	Nfatc2	intron	ENSMUSG00000027544	NonProperStrand	49	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-3.9702
chr19	8800105	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	chr3	153574613	153574655	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	1	-4.0701
chr7	108243710	108243800	LTR	ORR1A2	MaLR	chr7ORR1A2108243624	NonProperStrand	1	chr9	20315781	20315861	protein_coding	Zfp266	intron	ENSMUSG00000060510	ProperStrand	20	1	-inf
chr10	98462522	98462582	protein_coding	Atp2b1	exon	ENSMUSG00000019943	ProperStrand	31	chr11	69870769	69870785	protein_coding	Asgr1	exon	ENSMUSG00000020884	NonProperStrand	145	1	-12.8761
chr1	99666559	99666605	protein_coding	Ppip5k2	utr5	ENSMUSG00000040648	ProperStrand	35	chr4	131865935	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-4.6795
chr17	42827689	42827705	protein_coding	Gpr115	intron	ENSMUSG00000023918	ProperStrand	6	chrX	141939470	141939530	protein_coding	Amot	utr5	ENSMUSG00000041688	ProperStrand	4	1	-19.3129
chr5	109063677	109063694	protein_coding	Tmem175	intron	ENSMUSG00000013495	ProperStrand	31	chr4	131866609	131866673	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	1	-10.4367
chr3	153575089	153575168	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	chr16	23110476	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	6	-1.2107
chr1	20552541	20552558	protein_coding	Pkhd1	exon	ENSMUSG00000043760	NonProperStrand	49	chr4	22414139	22414155	protein_coding	Pou3f2	exon	ENSMUSG00000052621	NonProperStrand	90	1	-12.9100
chr2	101795084	101795191	protein_coding	Ldlrad3	exon	ENSMUSG00000048058	ProperStrand	53	chr16	23110957	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-1.7568
chr4	137714340	137714359	protein_coding	Eif4g3	exon	ENSMUSG00000028760	NonProperStrand	28	chr19	8798484	8798523	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-6.7168
chr11	6428035	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr17	35088957	35089025	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	14	-0.9834
chr7	13516173	13516193	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr12	31275591	31275608	protein_coding	Tmem18	utr3	ENSMUSG00000043061	ProperStrand	7	2	-inf
chr2	163843421	163843525	protein_coding	Ywhab	utr3	ENSMUSG00000018326	ProperStrand	33	chr16	23111372	23111428	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.1725
chr11	60599601	60599703	protein_coding	Smcr8	utr3	ENSMUSG00000049323	ProperStrand	46	chr7	116664872	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.0158
chr14	62006273	62006331	protein_coding	Kpna3	exon	ENSMUSG00000021929	ProperStrand	14	chr7	52382809	52382831	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	2	-15.4156
chr9	60697269	60697992	protein_coding	Uaca	exon	ENSMUSG00000034485	ProperStrand	109	chr2	146125210	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	2	-15.5769
chr13	9833551	9833686	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr11	19963440	19963461	protein_coding	Actr2	utr3	ENSMUSG00000020152	ProperStrand	72	2	-7.6412
chr3	87718526	87718837	protein_coding	Hdgf	exon	ENSMUSG00000004897	ProperStrand	117	chr17	24856620	24856679	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-5.1200
chr5	140240057	140240190	protein_coding	Ints1	exon	ENSMUSG00000029547	ProperStrand	45	chr14	31953025	31953118	protein_coding	Stab1	exon	ENSMUSG00000042286	NonProperStrand	127	1	-12.3892
chr10	81056885	81056902	protein_coding	Tle6	exon	ENSMUSG00000034758	ProperStrand	10	chr16	23111389	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	5	-18.9178
chr14	47395727	47395805	protein_coding	Cnih	utr3	ENSMUSG00000015759	ProperStrand	10	chr13	23775695	23775785	protein_coding	Hist1h2ac	exon	ENSMUSG00000069270	ProperStrand	22	1	-19.2301
chr15	63788215	63788315	protein_coding	Fam49b	utr5	ENSMUSG00000022378	ProperStrand	33	chr11	6428035	6428102	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	4	-13.9139
chrX	34622906	34622981	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	chr16	87419233	87419298	snoRNA	ENSMUSG00000065647_SNORA2	.	ENSMUSG00000065647	ProperStrand	123	4	-7.4459
chr18	16933117	16966848	protein_coding	Cdh2	exon	ENSMUSG00000024304	ProperStrand	71	chr8	75274492	75277084	protein_coding	Sin3b	exon	ENSMUSG00000031622	ProperStrand	66	1	-12.7835
chr8	24043076	24043176	protein_coding	Myst3	exon	ENSMUSG00000031540	ProperStrand	111	chr8	73419657	73419705	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	6	-12.6478
chr6	86731276	86731292	protein_coding	Anxa4	intron	ENSMUSG00000029994	ProperStrand	47	chr8	113362490	113362512	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	1	-9.7566
chr11	84722945	84722961	protein_coding	Myo19	exon	ENSMUSG00000020527	ProperStrand	82	chr6	63900464	63900481	protein_coding	Grid2	intron	ENSMUSG00000071424	ProperStrand	20	1	-14.9137
chr1	152270735	152270753	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	chr9	21199312	21199840	protein_coding	Ilf3	exon	ENSMUSG00000032178	ProperStrand	164	1	-6.9056
chr8	119464843	119464859	protein_coding	Cenpn	utr3	ENSMUSG00000031756	ProperStrand	15	chr4	131865381	131865471	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	2	-10.9347
chr4	151757043	151757061	protein_coding	Chd5	exon	ENSMUSG00000005045	ProperStrand	51	chr2	59192266	59192312	protein_coding	Pkp4	utr3	ENSMUSG00000026991	ProperStrand	33	2	-18.9290
chr10	80734141	80734231	protein_coding	Apba3	exon	ENSMUSG00000004931	ProperStrand	46	chr9	120039543	120039650	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	44	-inf
chr10	12341173	12353752	protein_coding	Utrn	exon	ENSMUSG00000019820	ProperStrand	69	chr5	99987915	99987931	protein_coding	A930011G23Rik	exon	ENSMUSG00000089809	NonProperStrand	43	1	-13.7062
chr6	114267189	114267207	protein_coding	Slc6a1	utr3	ENSMUSG00000030310	NonProperStrand	147	chr16	74119320	74119337	protein_coding	Robo2	intron	ENSMUSG00000052516	NonProperStrand	28	1	-13.0572
chr18	11836187	11851607	protein_coding	Rbbp8	exon	ENSMUSG00000041238	ProperStrand	7	chr4	131908688	131908748	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.0493
chr18	36177807	36177872	protein_coding	Nrg2	exon	ENSMUSG00000060275	ProperStrand	16	chrX	34622958	34623023	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-5.7063
chr9	64023527	64023934	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	chr14	96988071	96988179	snoRNA	ENSMUSG00000064581_SNORA30	.	ENSMUSG00000064581	ProperStrand	146	4	-19.7627
chr12	88438877	88438895	protein_coding	Ngb	utr3	ENSMUSG00000021032	NonProperStrand	1	chr17	46912308	46912328	protein_coding	Rpl7l1	utr3	ENSMUSG00000063888	ProperStrand	37	1	-inf
chrX	20258570	20259038	protein_coding	Uba1	exon	ENSMUSG00000001924	ProperStrand	156	chr9	15118285	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-1.8268
chr11	68837757	68837773	protein_coding	1500010J02Rik	exon	ENSMUSG00000020898	NonProperStrand	5	chr18	33954855	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-8.5187
mmu-miR-3535	0	23	miRNA	mmu-miR-3535	.	mmu-miR-3535	ProperStrand	15	chr7	29136601	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-8.2342
chr8	44391357	44391457	protein_coding	Zfp42	intron	ENSMUSG00000051176	ProperStrand	127	chr16	20684316	20684387	snoRNA	ENSMUSG00000077239_Snord66	.	ENSMUSG00000077239	ProperStrand	159	1	-9.8527
chr16	23110911	23111001	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	chr6	38007972	38008005	snoRNA	ENSMUSG00000088263_snoU13	.	ENSMUSG00000088263	ProperStrand	13	1	-2.3283
chr7	7089290	7089306	protein_coding	Zfp773	exon	ENSMUSG00000063535	ProperStrand	16	chr1	162966812	162966843	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-8.9191
chr13	21872170	21872288	protein_coding	Hist1h1b	exon	ENSMUSG00000058773	ProperStrand	65	chr4	131866244	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-3.5172
chr4	139295481	139295497	protein_coding	Pax7	utr3	ENSMUSG00000028736	ProperStrand	23	chrX	34622975	34623024	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-4.9855
chr3	152450608	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	chr2	160775101	160775156	protein_coding	Chd6	exon	ENSMUSG00000057133	ProperStrand	104	1	-7.7057
chr6	28681881	28681902	protein_coding	Lrrc4	intron	ENSMUSG00000049939	ProperStrand	9	chr1	88247809	88247880	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-8.9268
mmu-miR-2137	0	19	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	chr4	43505727	43505817	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	4	-6.4928
chr14	116765577	116765593	protein_coding	Gpc5	intron	ENSMUSG00000022112	ProperStrand	21	chr7	52382252	52382315	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-10.4051
chr6	119876647	119876686	protein_coding	Wnk1	exon	ENSMUSG00000045962	ProperStrand	221	chr19	8798740	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-2.4164
mmu-miR-5121	4	21	miRNA	mmu-miR-5121	.	mmu-miR-5121	ProperStrand	4	chr19	47735620	47736839	protein_coding	Col17a1	exon	ENSMUSG00000025064	ProperStrand	10	1	-19.3291
chr1	88426653	88426705	protein_coding	Ptma	utr3	ENSMUSG00000026238	ProperStrand	385	chr1	120355721	120355798	snRNA	ENSMUSG00000080542_U4atac	.	ENSMUSG00000080542	ProperStrand	73	7	-inf
chr18	36961592	36961658	misc_RNA	Vault	.	ENSMUSG00000065145	ProperStrand	177	chr1	162965530	162965587	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-4.3234
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr11	46148412	46148429	protein_coding	Itk	exon	ENSMUSG00000020395	NonProperStrand	3	1	-12.2357
chr12	52454669	52454817	protein_coding	G2e3	exon	ENSMUSG00000035293	ProperStrand	53	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.4846
chr11	69558467	69559091	protein_coding	Polr2a	exon	ENSMUSG00000005198	ProperStrand	200	chr18	73693166	73693184	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	3	-8.1438
chr7	146412095	146412145	protein_coding	Lrrc27	exon	ENSMUSG00000015980	ProperStrand	2	chr19	43689736	43689753	protein_coding	Nkx2-3	exon	ENSMUSG00000044220	NonProperStrand	1	1	-inf
chr14	60158036	60165906	protein_coding	Cab39l	exon	ENSMUSG00000021981	NonProperStrand	7	chr15	34370580	34370660	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-7.8301
chr2	113337481	113337501	protein_coding	Fmn1	intron	ENSMUSG00000044042	ProperStrand	17	chr1	162965550	162965571	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.6984
chrX	91783040	91783358	protein_coding	Maged1	exon	ENSMUSG00000025151	ProperStrand	43	chr3	123210854	123210907	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.6276
chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	chr17	39985499	39985540	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-1.3578
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr8	26827320	26827337	protein_coding	Whsc1l1	utr3	ENSMUSG00000054823	NonProperStrand	17	1	-11.3976
chr4	131865855	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr3	85942714	85942780	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	6	-1.8032
chr19	45079512	45079617	protein_coding	Mrpl43	utr3	ENSMUSG00000025208	ProperStrand	2	chr16	23110829	23110875	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr16	57391762	57391792	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr5	136614841	136615335	protein_coding	Alkbh4	utr5	ENSMUSG00000039754	ProperStrand	40	1	-8.6061
chr10	80005035	80005135	protein_coding	Rexo1	utr3	ENSMUSG00000047417	ProperStrand	46	chr7	29136543	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	10	-20.0365
chr2	129998643	129998709	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-2.3285
chr7	20349443	20349505	protein_coding	Bcam	exon	ENSMUSG00000002980	ProperStrand	43	chr7	116663664	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	5	-13.7050
chr15	76926631	76926648	lincRNA	1700109K24Rik	exon	ENSMUSG00000087126	ProperStrand	16	chr9	15118245	15118322	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-6.0250
chr12	114290175	114290191	protein_coding	Pacs2	intron	ENSMUSG00000021143	NonProperStrand	302	chr4	116945674	116945867	protein_coding	Rnf220	exon	ENSMUSG00000028677	ProperStrand	131	1	-8.5110
chr14	79980170	79980186	protein_coding	Elf1	exon	ENSMUSG00000036461	NonProperStrand	17	chr18	35716700	35716800	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-14.5781
chr3	22030931	22031031	protein_coding	Tbl1xr1	intron	ENSMUSG00000027630	ProperStrand	44	chr9	15119745	15119968	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.1801
chr5	124909883	124909973	protein_coding	Setd8	exon	ENSMUSG00000049327	ProperStrand	71	chr7	116664816	116664910	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	9	-inf
chr4	116283555	116283641	protein_coding	Nasp	exon	ENSMUSG00000028693	ProperStrand	64	chr3	152451117	152451135	protein_coding	Pigk	utr3	ENSMUSG00000039047	NonProperStrand	2	1	-inf
chr2	9985901	9985917	protein_coding	Atp5c1	exon	ENSMUSG00000025781	ProperStrand	138	chr16	23111689	23111753	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-0.7630
chr7	133534007	133534179	protein_coding	Nfatc2ip	exon	ENSMUSG00000030722	ProperStrand	26	chr7	52381973	52382006	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	3	-18.6795
chr11	61283362	61283379	LTR	RLTR20B3	ERVK	chr11RLTR20B361283341	ProperStrand	10	chr13	23663287	23663312	protein_coding	Hist1h2bg	utr5	ENSMUSG00000058385	ProperStrand	29	1	-19.3025
chr5	30002210	30002241	protein_coding	Ube3c	utr3	ENSMUSG00000039000	ProperStrand	48	chr11	69483183	69483273	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-4.9433
chr1	155287316	155287354	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	chr11	77996557	77996607	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-2.0931
chr5	120580758	120580794	protein_coding	Rbm19	exon	ENSMUSG00000029594	ProperStrand	40	chr11	69481335	69481456	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	3	-9.6828
chr10	127981390	127981480	protein_coding	Zc3h10	exon	ENSMUSG00000039810	ProperStrand	9	chr15	98356832	98356912	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	1	-11.6318
chr15	78724443	78724505	protein_coding	Gga1	utr3	ENSMUSG00000033128	ProperStrand	15	chr14	76247753	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	4	-19.4668
chr10	99976630	99977101	protein_coding	Cep290	utr5	ENSMUSG00000019971	ProperStrand	12	chr5	103854542	103854558	protein_coding	Ptpn13	utr5	ENSMUSG00000034573	NonProperStrand	74	1	-16.1639
chr5	120570293	120572906	protein_coding	Rbm19	exon	ENSMUSG00000029594	ProperStrand	40	chr10	80641718	80641761	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	2	-13.3263
chr13	76341035	76341055	protein_coding	Fam81b	intron	ENSMUSG00000078966	NonProperStrand	220	chr5	108334194	108334240	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-2.4407
chr15	88560860	88560940	protein_coding	Brd1	exon	ENSMUSG00000022387	ProperStrand	70	chr7	116663674	116663764	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	6	-13.4519
chrX	72214248	72214264	protein_coding-noncoding	Gab3	utr3	ENSMUSG00000032750	ProperStrand	420	chr4	116826699	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-3.0671
chr11	85630401	85630426	protein_coding	Bcas3	intron	ENSMUSG00000059439	ProperStrand	20	chr18	33954848	33954938	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-9.2370
chrX	71533839	71534003	protein_coding	Taz	exon	ENSMUSG00000009995	ProperStrand	59	chr16	23110916	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-0.8243
chr17	31722744	31722760	protein_coding	Pknox1	intron	ENSMUSG00000006705	ProperStrand	110	chr4	131865855	131865922	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.8518
chrX	98643218	98643241	protein_coding	Nono	utr3	ENSMUSG00000031311	ProperStrand	102	chr8	73419746	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.2112
chr15	10524776	10525629	protein_coding	Rai14	exon	ENSMUSG00000022246	ProperStrand	180	chr6	125071642	125071959	protein_coding	Chd4	exon	ENSMUSG00000063870	ProperStrand	303	6	-19.3155
chr16	17905186	17905273	protein_coding	Dgcr14	intron	ENSMUSG00000003527	ProperStrand	5	chr15	5068419	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-11.2001
chr17	81344133	81344150	protein_coding	Tmem178	exon	ENSMUSG00000024245	ProperStrand	67	chr10	90581241	90581283	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-4.5951
chr11	79845629	79845678	protein_coding	Suz12	exon	ENSMUSG00000017548	ProperStrand	53	chr11	77996588	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	2	-10.2714
chr10	110930035	110930450	protein_coding	Nap1l1	exon	ENSMUSG00000058799	ProperStrand	185	chrX	34622906	34622930	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	6	-9.4877
chr6	142211245	142214830	protein_coding	Slco1a5	exon	ENSMUSG00000063975	NonProperStrand	38	chr2	130103781	130103799	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-9.3899
chrX	138157436	138157452	protein_coding	Irs4	exon	ENSMUSG00000054667	ProperStrand	24	chr17	24857749	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-6.6830
chr4	59912024	59915652	protein_coding	Snx30	utr3	ENSMUSG00000028385	ProperStrand	8	chr4	131908689	131908800	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-8.0930
chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	chr7	28061792	28061809	protein_coding	Numbl	exon	ENSMUSG00000063160	NonProperStrand	9	1	-10.8534
chr14	51460336	51460654	protein_coding	Tep1	exon	ENSMUSG00000006281	ProperStrand	37	chr2	26493366	26493400	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-7.7475
chr9	116715150	116715169	protein_coding	Rbms3	intron	ENSMUSG00000039607	NonProperStrand	54	chr17	35089182	35089234	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-5.6915
chr4	41154085	41156402	protein_coding	Ubap2	exon	ENSMUSG00000028433	ProperStrand	292	chr14	31827478	31827513	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-3.8810
mmu-miR-5121	0	21	miRNA	mmu-miR-5121	.	mmu-miR-5121	ProperStrand	4	chr7	52382097	52382161	protein_coding	Rpl13a	exon	ENSMUSG00000074129	ProperStrand	269	1	-15.9672
chr8	113568895	113577145	protein_coding	Aars	exon	ENSMUSG00000031960	ProperStrand	355	chr5	130300460	130300547	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	5	-2.7510
chr16	20522422	20522512	protein_coding-noncoding	Dvl3	utr5	ENSMUSG00000003233	ProperStrand	1	chr16	20522166	20522246	protein_coding	Dvl3	intron	ENSMUSG00000003233	ProperStrand	6	1	-inf
chr1	173332298	173332314	protein_coding	Arhgap30	exon	ENSMUSG00000048865	NonProperStrand	15	chr4	131865858	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-7.1614
chr4	140562709	140562905	protein_coding	Atp13a2	exon	ENSMUSG00000036622	ProperStrand	39	chr16	23110971	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-5.3244
chr5	54389949	54389967	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	chr13	9329733	9329751	protein_coding	Dip2c	intron	ENSMUSG00000048264	ProperStrand	27	1	-12.3964
chr12	70462392	70462472	misc_RNA	AC157822.1	.	ENSMUSG00000092773	ProperStrand	18	chr7	117190030	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	4	-17.5830
chr17	35386010	35386105	protein_coding-noncoding	Ddx39b	utr5	ENSMUSG00000019432	ProperStrand	7	chr16	23110990	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.4785
chr9	105946597	105950049	protein_coding	Col6a4	exon	ENSMUSG00000032572	ProperStrand	22	chr19	8963153	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.0882
chr10	20080843	20080860	protein_coding	Fam54a	utr3	ENSMUSG00000019992	ProperStrand	232	chr3	68889146	68889247	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-1.0923
chr10	77517731	77519609	protein_coding	Dnmt3l	exon	ENSMUSG00000000730	ProperStrand	37	chr15	68012619	68012635	protein_coding	Zfat	exon	ENSMUSG00000022335	NonProperStrand	25	1	-16.0265
chr17	71744214	71747921	protein_coding	Smchd1	exon	ENSMUSG00000024054	ProperStrand	79	chr17	24857784	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	15	-22.3416
chr11	58083592	58083672	LTR	RLTR25A	ERVK	chr11RLTR25A58083521	NonProperStrand	1	chr11	58083693	58083783	LTR	RLTR25A	ERVK	chr11RLTR25A58083709	NonProperStrand	1	1	-inf
chr6	125413743	125413759	protein_coding	Cd9	exon	ENSMUSG00000030342	NonProperStrand	6	chr7	29136525	29136566	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-6.8330
chr16	78545303	78545383	protein_coding	D16Ertd472e	utr3	ENSMUSG00000022864	ProperStrand	1	chr4	131908689	131908779	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-inf
chr10	119531289	119531321	protein_coding	Helb	exon	ENSMUSG00000020228	ProperStrand	41	chr9	120037933	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	4	-16.7197
chr9	30235085	30235101	protein_coding	Snx19	exon	ENSMUSG00000031993	ProperStrand	353	chr15	82980085	82980168	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	3	-9.1042
chr14	65431165	65431267	protein_coding	Hmbox1	utr3	ENSMUSG00000021972	NonProperStrand	17	chr17	66468402	66468427	protein_coding	ORF19	exon	ENSMUSG00000024101	NonProperStrand	3	1	-inf
chr4	41160815	41160842	protein_coding	Ubap2	exon	ENSMUSG00000028433	ProperStrand	292	chr3	68889191	68889266	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	11	-16.6464
chr10	18393547	18393563	protein_coding	D10Bwg1379e	intron	ENSMUSG00000019852	NonProperStrand	120	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.8227
chr11	78313939	78313956	protein_coding	Vtn	exon	ENSMUSG00000017344	ProperStrand	188	chr5	119171884	119171929	protein_coding	Med13l	utr5	ENSMUSG00000018076	ProperStrand	226	1	-8.3681
chr4	154628436	154628521	protein_coding	2610002J02Rik	intron	ENSMUSG00000073684	ProperStrand	18	chr19	8798743	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-7.1868
chr10	65141494	65141562	LINE	L1Md_F3	L1	chr10L1Md_F365136844	ProperStrand	1	chr8	32260335	32260371	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-inf
chr2	136921230	136921246	protein_coding	Jag1	exon	ENSMUSG00000027276	ProperStrand	15	chr5	130300419	130300485	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-5.1031
chr13	23775379	23775410	protein_coding	Hist1h2ac	utr3	ENSMUSG00000069270	ProperStrand	22	chr16	23111754	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.6613
chr11	50019588	50020766	protein_coding	Sqstm1	exon	ENSMUSG00000015837	ProperStrand	36	chr13	93446548	93446565	protein_coding	Serinc5	intron	ENSMUSG00000021703	ProperStrand	57	1	-14.4484
chr5	74489263	74489319	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr11	45697874	45697896	protein_coding	Clint1	exon	ENSMUSG00000006169	ProperStrand	19	2	-12.7083
chr3	15926781	15926871	LINE	L1_Mm	L1	chr3L1_Mm15926266	ProperStrand	1	chr3	15927062	15927142	LINE	L1_Mm	L1	chr3L1_Mm15926984	ProperStrand	1	1	-inf
chr6	85191383	85191473	protein_coding	Sfxn5	intron	ENSMUSG00000033720	NonProperStrand	10	chr11	96570674	96570754	protein_coding	Skap1	intron	ENSMUSG00000057058	NonProperStrand	7	2	-inf
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr9	102631857	102631906	protein_coding	Amotl2	exon	ENSMUSG00000032531	ProperStrand	54	2	-14.0067
chr16	42506105	42506185	LINE	L1MC3	L1	chr16L1MC342506092	ProperStrand	1	chr16	42506322	42506412	LTR	MLT1A0	MaLR	chr16MLT1A042506319	NonProperStrand	1	1	-inf
chr1	130171495	130173547	protein_coding	Ubxn4	exon	ENSMUSG00000026353	ProperStrand	19	chr11	62416583	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	9	-inf
chr17	47460537	47461552	protein_coding	Trerf1	exon	ENSMUSG00000064043	ProperStrand	56	chr1	72272833	72272913	snRNA	ENSMUSG00000075752_U2	.	ENSMUSG00000075752	ProperStrand	535	1	-9.0726
chr11	109827453	109827471	protein_coding	Abca8b	intron	ENSMUSG00000020620	ProperStrand	8	chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-11.8681
chr6	85580111	85580128	protein_coding	Alms1	intron	ENSMUSG00000063810	ProperStrand	37	chr19	8963086	8963165	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.1181
chr2	30979354	30979444	protein_coding	Fnbp1	intron	ENSMUSG00000075415	ProperStrand	53	chr12	112779177	112779257	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-5.0158
chr10	76551682	76558775	protein_coding	Col18a1	exon	ENSMUSG00000001435	ProperStrand	287	chr7	88038147	88038544	protein_coding	Wdr73	exon	ENSMUSG00000025722	ProperStrand	6	1	-14.9335
chr8	73877953	73877979	protein_coding	Myo9b	exon	ENSMUSG00000004677	ProperStrand	78	chr19	10677290	10677359	protein_coding	Dak	intron	ENSMUSG00000034371	ProperStrand	12	1	-16.0758
chr6	134385248	134385338	protein_coding	Bcl2l14	intron	ENSMUSG00000030200	ProperStrand	5	chr3	108357276	108357356	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-9.6221
chr16	4087800	4087886	protein_coding	Crebbp	exon	ENSMUSG00000022521	ProperStrand	56	chr19	8800356	8800446	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-3.6576
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chrX	54499648	54502153	protein_coding	Arhgef6	exon	ENSMUSG00000031133	ProperStrand	20	1	-6.6233
chr1	38089164	38089946	protein_coding	Eif5b	exon	ENSMUSG00000026083	ProperStrand	118	chr9	120038589	120038669	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	8	-17.0669
chr5	115236810	115239325	protein_coding	Ankrd13a	exon	ENSMUSG00000041870	NonProperStrand	11	chr19	8963092	8963182	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.4574
chr2	90235314	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr15	103030188	103030210	protein_coding	Cbx5	exon	ENSMUSG00000009575	ProperStrand	98	1	-3.5418
chr1	119375947	119376037	LINE	L1M4	L1	chr1L1M4119375936	ProperStrand	1	chr6	13592906	13592986	protein_coding	B630005N14Rik	intron	ENSMUSG00000042742	NonProperStrand	2	1	-inf
chr4	43505822	43505901	protein_coding	Ccdc107	intron	ENSMUSG00000028461	ProperStrand	69	chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	NonProperStrand	14	1	-16.0483
chr3	85945233	85945267	protein_coding	Rps3a	exon	ENSMUSG00000028081	ProperStrand	177	chrX	138768381	138768423	protein_coding	Acsl4	intron	ENSMUSG00000031278	ProperStrand	31	1	-12.4775
chr9	49278220	49278310	protein_coding	Ttc12	intron	ENSMUSG00000040219	ProperStrand	5	chr7	148634747	148634827	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-9.0363
chr17	13115666	13115766	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	chr11	51551273	51551334	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	2	-3.9783
chr7	7089290	7089306	protein_coding	Zfp773	exon	ENSMUSG00000063535	ProperStrand	16	chr7	28641640	28641656	protein_coding	Zfp59	utr3	ENSMUSG00000078779	ProperStrand	7	1	-inf
chr13	21539680	21539749	protein_coding	Zfp187	exon	ENSMUSG00000022228	ProperStrand	7	chr2	26768392	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-9.9835
chr4	43569603	43575049	protein_coding	Tln1	utr5	ENSMUSG00000028465	ProperStrand	101	chr8	113564232	113564259	protein_coding	Aars	intron	ENSMUSG00000031960	ProperStrand	355	2	-13.8311
chr11	4539812	4539861	protein_coding	Ascc2	intron	ENSMUSG00000020412	ProperStrand	27	chr11	97642966	97643056	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	7	-inf
chr11	74236218	74236235	protein_coding	Rap1gap2	intron	ENSMUSG00000038807	NonProperStrand	7	chr16	23110828	23110874	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.4785
chr16	11144154	11144244	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr17	48409079	48409096	protein_coding	Treml4	exon	ENSMUSG00000051682	NonProperStrand	1	1	-inf
chr13	58400751	58400770	protein_coding	Kif27	intron	ENSMUSG00000060176	ProperStrand	75	chr11	106362557	106362638	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-6.9607
chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	chr17	35087894	35087962	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	3	-4.6080
chr15	99962363	99962449	protein_coding	Dip2b	exon	ENSMUSG00000023026	ProperStrand	48	chr18	35716808	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.5460
chr8	96556341	96560681	protein_coding	Nudt21	exon	ENSMUSG00000031754	ProperStrand	33	chr17	35087894	35087940	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-6.3771
chr12	86337554	86337592	protein_coding	Ylpm1	exon	ENSMUSG00000021244	ProperStrand	100	chr5	130295449	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-4.2670
chr2	32818886	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	chr8	113362430	113362478	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	1	-1.8152
chr10	80809668	80809684	protein_coding	Hmg20b	exon	ENSMUSG00000020232	ProperStrand	157	chr5	111214691	111214715	protein_coding	Ulk1	utr3	ENSMUSG00000029512	ProperStrand	92	1	-10.5242
chr8	74013109	74013125	protein_coding	Gtpbp3	exon	ENSMUSG00000007610	ProperStrand	21	chr15	25711244	25711286	protein_coding	Myo10	exon	ENSMUSG00000022272	ProperStrand	168	1	-13.3763
chr17	83906316	83906406	protein_coding	Cox7a2l	intron	ENSMUSG00000024248	NonProperStrand	1	chr7	125794932	125795012	protein_coding	Tmc5	intron	ENSMUSG00000030650	NonProperStrand	1	1	-inf
chrX	83547356	83547372	protein_coding	Mageb4	intron	ENSMUSG00000035427	NonProperStrand	191	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-3.6281
chr1	46078109	46078128	protein_coding	Gm4776	utr3	ENSMUSG00000044457	NonProperStrand	24	chr4	131908236	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-5.1018
chr4	59034864	59034885	protein_coding	Dnajc25	intron	ENSMUSG00000070972	NonProperStrand	4	chr7	116663679	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-13.1590
chr12	110837865	110837882	protein_coding	Rtl1	intron	ENSMUSG00000085925	ProperStrand	5	chr5	108336375	108336432	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-9.9783
chr12	111933567	111933584	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr17	27236036	27236052	protein_coding	Itpr3	exon	ENSMUSG00000042644	ProperStrand	137	1	-6.6185
chr10	98728752	98728800	protein_coding	Dusp6	exon	ENSMUSG00000019960	ProperStrand	116	chr12	60141326	60141406	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	7	-inf
chr19	12017393	12017825	protein_coding	Patl1	exon	ENSMUSG00000046139	ProperStrand	49	chr16	23111774	23111798	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-3.9967
chr18	35554083	35554173	protein_coding	Sil1	intron	ENSMUSG00000024357	ProperStrand	31	chr3	68889085	68889175	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	NonProperStrand	26	1	-16.3128
chr2	101792123	101792186	protein_coding	Ldlrad3	utr3	ENSMUSG00000048058	ProperStrand	53	chr4	131908717	131908807	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.3969
chr13	107737212	107737228	protein_coding	Dimt1	utr5	ENSMUSG00000021692	ProperStrand	185	chr5	143874599	143874615	protein_coding	Rnf216	utr5	ENSMUSG00000045078	NonProperStrand	29	1	-12.5251
chr7	108440949	108440967	protein_coding	Atg16l2	intron	ENSMUSG00000047767	ProperStrand	121	chr2	144087324	144087357	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-5.1711
chr16	36886302	36887328	antisense	4930565N06Rik	.	ENSMUSG00000084834	ProperStrand	27	chr11	101836138	101836187	protein_coding	Dusp3	exon	ENSMUSG00000003518	ProperStrand	4	1	-inf
chr5	33369477	33369578	protein_coding	Ywhah	exon	ENSMUSG00000018965	ProperStrand	81	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-5.2358
chr9	119349398	119349478	lincRNA	Gm16707	exon	ENSMUSG00000086780	NonProperStrand	17	chr9	119336577	119336667	protein_coding	Acvr2b	exon	ENSMUSG00000061393	ProperStrand	21	9	-19.5420
chr14	122870816	122870832	lincRNA	2610035F20Rik	exon	ENSMUSG00000085555	ProperStrand	29	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-7.3135
chr4	139482849	139482865	lincRNA	4933427I22Rik	exon	ENSMUSG00000085928	ProperStrand	62	chr11	97643007	97643060	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.4159
chr10	109988872	109988889	LTR	RMER13A	ERVK	chr10RMER13A109988484	ProperStrand	15	chr4	131908357	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.7937
chr4	145189888	145189915	protein_coding	Gm13212	intron	ENSMUSG00000078502	ProperStrand	4	chr19	8800355	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	3	-inf
chr2	167131319	167132152	protein_coding	B4galt5	exon	ENSMUSG00000017929	ProperStrand	22	chrX	34622940	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-5.0729
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr11	75321836	75321914	protein_coding	Prpf8	utr3	ENSMUSG00000020850	ProperStrand	255	2	-5.4188
chr13	21845681	21845698	protein_coding	Hist1h2ak	utr5	ENSMUSG00000063021	ProperStrand	30	chr2	144087322	144087449	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	3	-17.7053
chr10	36721345	36721396	protein_coding	Hdac2	utr3	ENSMUSG00000019777	ProperStrand	36	chr5	130300518	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-5.8541
chr4	135846171	135846187	protein_coding	Zfp46	exon	ENSMUSG00000051351	NonProperStrand	85	chr16	34549713	34549731	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-10.9850
chr8	3946106	3946131	protein_coding	Cd209c	utr5	ENSMUSG00000040165	ProperStrand	10	chr10	23770362	23770378	protein_coding	Taar7f	exon	ENSMUSG00000060825	NonProperStrand	40	1	-17.9020
chr6	14033738	14033828	LINE	L1_Mus4	L1	chr6L1_Mus414033493	NonProperStrand	1	chr11	37010545	37010625	protein_coding	Odz2	intron	ENSMUSG00000049336	ProperStrand	106	1	-inf
chr11	115999916	115999932	protein_coding	Mrpl38	exon	ENSMUSG00000020775	NonProperStrand	65	chr1	72896223	72898621	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	1	-9.3232
chr16	36886302	36887328	antisense	4930565N06Rik	.	ENSMUSG00000084834	ProperStrand	27	chr5	74489201	74489234	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	1	-7.2076
mmu-miR-6240	3	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr10	76533722	76534373	protein_coding	Col18a1	exon	ENSMUSG00000001435	ProperStrand	287	2	-5.0928
chr12	111930935	111930964	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr7	117166717	117166807	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-0.6933
chr16	20686965	20686983	protein_coding	Eif4g1	exon	ENSMUSG00000045983	ProperStrand	199	chr18	35714187	35714250	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-2.7103
chr2	164251663	164251728	protein_coding	Sdc4	exon	ENSMUSG00000017009	ProperStrand	177	chr18	35716686	35716786	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-3.5291
chr18	57400307	57400324	protein_coding	Megf10	exon	ENSMUSG00000024593	ProperStrand	143	chr7	29136525	29136576	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.0581
chr16	43876838	43876956	protein_coding	Qtrtd1	exon	ENSMUSG00000022704	ProperStrand	11	chr18	82773672	82773688	protein_coding	Zfp236	exon	ENSMUSG00000041258	NonProperStrand	117	1	-15.4296
chr12	7984504	7984521	protein_coding	Apob	utr5	ENSMUSG00000020609	ProperStrand	10	chr7	116663654	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	6	-inf
chr15	36527805	36527863	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr5	144651694	144651794	protein_coding	Eif2ak1	intron	ENSMUSG00000029613	ProperStrand	37	1	-8.8531
chr13	12313781	12314423	protein_coding	Mtr	exon	ENSMUSG00000021311	ProperStrand	22	chr18	35716762	35716862	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.9687
chr10	128715074	128715090	LINE	L1Md_T	L1	chr10L1Md_T128709783	ProperStrand	1	chr5	138179192	138179221	protein_coding	6430598A04Rik	exon	ENSMUSG00000045348	ProperStrand	7	1	-inf
chr2	32644379	32644469	protein_coding	Stxbp1	utr3	ENSMUSG00000026797	ProperStrand	33	chr19	8963096	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	10	-20.2241
chr6	89285314	89285417	protein_coding	Plxna1	exon	ENSMUSG00000030084	ProperStrand	233	chr15	82980125	82980225	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-4.4909
chr2	26493430	26493510	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr15	81542153	81542523	protein_coding	Rangap1	exon	ENSMUSG00000022391	ProperStrand	69	1	-5.9194
chr2	179630599	179630616	protein_coding	Cdh4	exon	ENSMUSG00000000305	ProperStrand	171	chr10	17838757	17838800	protein_coding	Reps1	exon	ENSMUSG00000019854	ProperStrand	60	1	-11.2118
chr8	38048958	38049048	SINE	B1_Mus2	Alu	chr8B1_Mus238048950	ProperStrand	1	chr11	72975655	72975745	protein_coding	P2rx5	intron	ENSMUSG00000005950	ProperStrand	3	1	-inf
chr15	98359846	98361815	protein_coding	2310037I24Rik	exon	ENSMUSG00000022992	ProperStrand	91	chr1	162967491	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-4.7588
chr7	150717296	150717424	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	chr15	34370545	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	20	-3.4752
chr9	103945063	103945079	protein_coding	Nphp3	utr3	ENSMUSG00000032558	NonProperStrand	5	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-8.2678
chr11	98694066	98694088	protein_coding	Casc3	utr3	ENSMUSG00000078676	ProperStrand	33	chr16	23111770	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-5.0797
chr9	104084392	104084418	protein_coding	Dnajc13	exon	ENSMUSG00000032560	ProperStrand	60	chr14	33005138	33005235	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-3.9936
chr19	5493627	5493699	protein_coding	Cfl1	utr3	ENSMUSG00000056201	ProperStrand	88	chr11	69481368	69481458	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-2.5253
chr2	129243393	129243484	LTR	RLTR14	ERV1	chr2RLTR14129243362	ProperStrand	1	chr2	146657337	146657417	antisense	Gm14114	.	ENSMUSG00000087618	ProperStrand	1	1	-inf
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr2	24205199	24205215	protein_coding	Il1rn	utr3	ENSMUSG00000026981	ProperStrand	45	1	-6.4720
chr6	47731681	47731706	misc_RNA	Y_RNA	.	ENSMUSG00000064945	ProperStrand	93	chr1	182529749	182529781	protein_coding	Parp1	exon	ENSMUSG00000026496	ProperStrand	227	1	-9.7652
chr19	29326595	29336675	protein_coding	Jak2	utr5	ENSMUSG00000024789	NonProperStrand	2	chr19	8989931	8989988	protein_coding	Ganab	exon	ENSMUSG00000071650	ProperStrand	145	1	-19.0826
chr9	15121038	15121088	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	chr5	125316615	125316632	protein_coding	Ccdc92	exon	ENSMUSG00000037979	ProperStrand	45	1	-10.2864
chr8	109898440	109898540	protein_coding	Nfat5	utr3	ENSMUSG00000003847	ProperStrand	29	chr2	166890557	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-9.0185
chr17	32348122	32348157	protein_coding	Brd4	exon	ENSMUSG00000024002	ProperStrand	121	chr12	88778631	88778665	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	3	-12.0147
chr11	119129514	119131416	protein_coding	Gaa	utr5	ENSMUSG00000025579	ProperStrand	149	chr9	15118330	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-1.8988
chr3	82816757	82816774	protein_coding	Fgg	exon	ENSMUSG00000033860	NonProperStrand	321	chr1	89673512	89673593	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	3	-2.4674
chr19	17078304	17081117	protein_coding	Prune2	exon	ENSMUSG00000039126	ProperStrand	49	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.0906
chr2	158184118	158184208	snoRNA	ENSMUSG00000064995_SNORA71	.	ENSMUSG00000064995	ProperStrand	430	chr9	120037898	120037962	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	2	-2.4858
chr3	107416884	107416974	protein_coding	Fam40a	intron	ENSMUSG00000014601	ProperStrand	18	chr9	120039533	120039618	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-5.6296
chr4	108278918	108278934	protein_coding	Orc1	exon	ENSMUSG00000028587	ProperStrand	161	chr11	86538711	86539757	protein_coding	Cltc	exon	ENSMUSG00000047126	ProperStrand	319	1	-7.9915
chr7	133702197	133702412	protein_coding	Eif3c	exon	ENSMUSG00000030738	ProperStrand	92	chr7	29136570	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-3.0993
chr5	124212329	124212409	protein_coding	Kntc1	intron	ENSMUSG00000029414	NonProperStrand	2	chr5	124269569	124269659	protein_coding	Kntc1	intron	ENSMUSG00000029414	ProperStrand	27	1	-21.0126
chr5	122891409	122893815	protein_coding	Anapc7	exon	ENSMUSG00000029466	ProperStrand	11	chr18	82662186	82662202	protein_coding	Mbp	intron	ENSMUSG00000041607	NonProperStrand	185	1	-14.5135
chr9	7799961	7800061	LTR	MMETn-int	ERVK	chr9MMETn-int7799284	ProperStrand	1	chr16	23111763	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-inf
chr14	70132006	70132040	protein_coding	Chmp7	exon	ENSMUSG00000034190	ProperStrand	6	chr16	23111449	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-9.1716
chr7	52378320	52378567	protein_coding	Rps11	exon	ENSMUSG00000003429	ProperStrand	49	chr2	144415191	144415211	protein_coding	Sec23b	intron	ENSMUSG00000027429	NonProperStrand	2	1	-inf
chr19	9949326	9949588	protein_coding	Incenp	exon	ENSMUSG00000024660	ProperStrand	111	chr4	131865426	131865855	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-2.8780
chr3	106909227	106909243	protein_coding	Kcna2	utr3	ENSMUSG00000040724	ProperStrand	17	chr4	131865380	131865444	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-6.4708
chr1	178915089	178915157	protein_coding	Sdccag8	intron	ENSMUSG00000026504	ProperStrand	54	chr7	52713406	52713489	protein_coding	Ftl1	utr3	ENSMUSG00000050708	ProperStrand	807	1	-8.3277
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr19	31157628	31157644	protein_coding	Cstf2t	exon	ENSMUSG00000053536	ProperStrand	48	1	-13.5996
chr11	59661803	59661819	protein_coding	Nt5m	exon	ENSMUSG00000032615	ProperStrand	17	chr19	8963087	8963180	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.5881
chr7	29939533	29939703	protein_coding	Fam98c	exon	ENSMUSG00000030590	ProperStrand	9	chr19	8800357	8800437	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	3	-16.8823
chr14	32896199	32896216	protein_coding	Dph3	utr3	ENSMUSG00000021905	ProperStrand	1	chr2	103573928	103573944	protein_coding	Nat10	exon	ENSMUSG00000027185	NonProperStrand	64	1	-inf
chr4	137121289	137121307	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	chr14	66011953	66012046	protein_coding	Zfp395	exon	ENSMUSG00000034522	ProperStrand	15	1	-10.9168
chr11	96669048	96669098	protein_coding-noncoding	Cbx1	utr5	ENSMUSG00000018666	ProperStrand	17	chr15	79913287	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-6.0370
chr2	165124128	165124149	protein_coding	Elmo2	exon	ENSMUSG00000017670	ProperStrand	14	chr2	153050783	153050799	protein_coding	Tspyl3	exon	ENSMUSG00000074671	ProperStrand	228	1	-13.6018
chrX	148341853	148341877	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	chr8	3568023	3568039	protein_coding	C330021F23Rik	utr5	ENSMUSG00000065952	NonProperStrand	85	1	-8.3675
chr13	72765623	72765640	antisense	Gm20554	.	ENSMUSG00000093587	NonProperStrand	40	chr8	127413448	127413530	protein_coding	Gnpat	utr3	ENSMUSG00000031985	ProperStrand	20	1	-16.3558
chr7	52949041	52949141	protein_coding	Ntn5	intron	ENSMUSG00000070564	ProperStrand	2	chr4	131865930	131865969	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-8.7800
chr1	52257855	52257882	protein_coding	Gls	intron	ENSMUSG00000026103	ProperStrand	56	chr7	116663634	116663767	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	4	-9.4071
chr5	100855902	100855931	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr16	14138610	14138680	protein_coding	4921513D23Rik	intron	ENSMUSG00000060657	ProperStrand	47	2	-11.4607
chr8	86782815	86784198	protein_coding	Ccdc130	exon	ENSMUSG00000004994	ProperStrand	29	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-10.0587
chr2	71085911	71086866	protein_coding	Dync1i2	exon	ENSMUSG00000027012	ProperStrand	35	chr14	31827477	31827498	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-8.0225
chr1	162968442	162968510	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	chr1	162966812	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	2	-0.8392
chr11	69492153	69494005	protein_coding	Senp3	exon	ENSMUSG00000005204	ProperStrand	65	chr15	34370545	34370667	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	21	-inf
chrX	99445995	99446012	protein_coding	Cited1	utr5	ENSMUSG00000051159	ProperStrand	72	chr19	8963027	8963083	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.9763
chr11	68864903	68864935	protein_coding	Aurkb	utr3	ENSMUSG00000020897	NonProperStrand	2	chr2	157762126	157762144	protein_coding	Vstm2l	intron	ENSMUSG00000037843	NonProperStrand	4	1	-inf
chr11	97565248	97565284	protein_coding	Psmb3	exon	ENSMUSG00000069744	ProperStrand	26	chr17	35201168	35201184	protein_coding	AU023871	utr3	ENSMUSG00000073414	ProperStrand	1	1	-inf
chr5	100855902	100855943	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr7	13516158	13516206	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	1	-2.2917
chrX	139272554	139272654	protein_coding	Tmem164	utr3	ENSMUSG00000047045	ProperStrand	13	chr17	35088957	35089021	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-8.9493
chr6	118363802	118363863	protein_coding	Bms1	exon	ENSMUSG00000030138	ProperStrand	107	chr11	69481334	69481434	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-2.1967
chr16	57391628	57391724	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr3	123210896	123210986	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	NonProperStrand	45	2	-17.0774
chr2	75499992	75500023	protein_coding	Hnrnpa3	exon	ENSMUSG00000059005	ProperStrand	289	chr17	35299562	35299597	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-1.9561
chr9	65127126	65127142	protein_coding	Cilp	exon	ENSMUSG00000042254	ProperStrand	212	chr7	116664870	116664916	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-0.7220
chr12	104330679	104330695	protein_coding	Unc79	intron	ENSMUSG00000021198	NonProperStrand	25	chr2	158182222	158182291	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-6.7305
chr11	116535507	116535533	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr17	75088475	75088554	protein_coding	Birc6	intron	ENSMUSG00000024073	ProperStrand	110	3	-11.2213
chr11	33258845	33258864	protein_coding	Ranbp17	intron	ENSMUSG00000040594	NonProperStrand	29	chr2	22444380	22444400	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-9.2387
chr5	24257580	24257597	protein_coding	Crygn	intron	ENSMUSG00000038135	NonProperStrand	2	chr4	131908744	131908807	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-inf
chr8	106520792	106520882	LTR	MER70A	ERVL	chr8MER70A106520701	NonProperStrand	1	chr8	106520428	106520508	SINE	RSINE1	B4	chr8RSINE1106520434	NonProperStrand	1	1	-inf
chr14	121327761	121328578	protein_coding	Ipo5	exon	ENSMUSG00000030662	ProperStrand	135	chr18	35716847	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-0.9826
chr4	116827120	116827187	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	chr5	23358027	23358060	snoRNA	ENSMUSG00000093321_Snord93	.	ENSMUSG00000093321	ProperStrand	218	3	-10.7752
chr7	51503494	51503528	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	chr5	108334228	108334328	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	5	-5.7616
chr7	52974909	52976151	protein_coding	Rpl18	exon	ENSMUSG00000059070	ProperStrand	116	chr9	15119646	15119726	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	5	-8.3655
chr3	89543128	89543218	protein_coding	Adar	exon	ENSMUSG00000027951	ProperStrand	52	chr11	68886932	68887012	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-4.4160
chr5	29769902	29769920	protein_coding	Nom1	exon	ENSMUSG00000001569	ProperStrand	11	chr6	71832629	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-9.0343
chr13	67034190	67034270	protein_coding	Ptdss1	utr5	ENSMUSG00000021518	ProperStrand	10	chr1	136528537	136528627	protein_coding	Kdm5b	utr3	ENSMUSG00000042207	ProperStrand	223	1	-14.3479
chr16	20709246	20709278	protein_coding	Clcn2	exon	ENSMUSG00000022843	ProperStrand	7	chr16	23111754	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.9463
chr19	45409728	45409747	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chrX	132420520	132420615	protein_coding	Bhlhb9	utr5	ENSMUSG00000072964	ProperStrand	11	1	-12.1770
chr10	82456766	82456784	protein_coding	Chst11	intron	ENSMUSG00000034612	ProperStrand	170	chr11	33056041	33056668	protein_coding	Npm1	exon	ENSMUSG00000057113	ProperStrand	352	1	-7.6880
chr16	90386835	90386853	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	chr19	8798742	8798812	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-3.7589
chr17	46327675	46331174	protein_coding	Polh	exon	ENSMUSG00000023953	ProperStrand	6	chr3	68889126	68889216	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-7.8444
chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr5	122580412	122584741	protein_coding	Ccdc63	utr5	ENSMUSG00000043036	ProperStrand	120	1	-5.0976
chr2	118611946	118611962	protein_coding	Disp2	exon	ENSMUSG00000040035	NonProperStrand	204	chr7	19720978	19721045	protein_coding	Fbxo46	exon	ENSMUSG00000050428	ProperStrand	2	1	-18.9971
chr9	44432573	44432623	protein_coding	Ddx6	exon	ENSMUSG00000032097	ProperStrand	59	chr9	15119735	15119767	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.6588
chr4	133166355	133166387	protein_coding	Zdhhc18	exon	ENSMUSG00000037553	ProperStrand	51	chr2	103880930	103880964	snoRNA	ENSMUSG00000087739_SCARNA21	.	ENSMUSG00000087739	ProperStrand	50	1	-14.0074
chr4	125732651	125732716	protein_coding	Mrps15	exon	ENSMUSG00000028861	ProperStrand	3	chr1	16635852	16635879	protein_coding	Tceb1	exon	ENSMUSG00000079658	ProperStrand	6	1	-inf
chr17	27262115	27262161	protein_coding	2900010M23Rik	exon	ENSMUSG00000024208	ProperStrand	13	chr15	34370545	34370607	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-10.6671
chr10	96325861	96325878	SINE	MIRb	MIR	chr10MIRb96325849	ProperStrand	15	chr4	131908833	131908871	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.5353
chr5	143550022	143550098	protein_coding	Tnrc18	exon	ENSMUSG00000039477	ProperStrand	39	chr15	98350203	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	4	-17.1296
chr13	70776149	70776165	protein_coding	BC018507	intron	ENSMUSG00000034525	NonProperStrand	7	chr9	120038466	120038519	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-7.2707
chr8	13416896	13416912	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr6	70805453	70805573	snoRNA	ENSMUSG00000065750_SNORA5	.	ENSMUSG00000065750	ProperStrand	165	2	-7.4530
chr8	126186190	126186254	protein_coding	Rhou	utr3	ENSMUSG00000039960	ProperStrand	3	chr8	73115775	73115791	protein_coding	Ell	utr3	ENSMUSG00000070002	NonProperStrand	134	2	-inf
chr11	69163957	69164023	protein_coding	Chd3	intron	ENSMUSG00000018474	ProperStrand	438	chr17	45705020	45705190	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	1	-2.9463
chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	chr11	69483135	69483278	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	15	-2.7375
mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr8	3642156	3642172	protein_coding	Stxbp2	intron	ENSMUSG00000004626	NonProperStrand	73	1	-5.5193
chr13	22919446	22919463	protein_coding	Vmn1r210	exon	ENSMUSG00000061296	ProperStrand	1	chr3	68889026	68889101	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-inf
chr13	23776425	23776500	protein_coding	Hist1h2bc	utr3	ENSMUSG00000018102	ProperStrand	3	chr18	35716787	35716877	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-8.1910
chr14	76906478	76906568	protein_coding	Tsc22d1	utr3	ENSMUSG00000022010	ProperStrand	86	chr9	120039567	120039647	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.6773
chr15	96519544	96520341	protein_coding	Slc38a2	utr3	ENSMUSG00000022462	ProperStrand	133	chr16	23111388	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-2.4527
chr10	5987712	5987841	protein_coding	Akap12	utr3	ENSMUSG00000038587	NonProperStrand	3	chr19	29674392	29674408	protein_coding	C030046E11Rik	exon	ENSMUSG00000038658	ProperStrand	104	1	-19.4396
chr15	76541224	76541240	protein_coding	Lrrc14	utr5	ENSMUSG00000033728	ProperStrand	52	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-6.1243
chr18	67585646	67588664	protein_coding	Afg3l2	exon	ENSMUSG00000024527	ProperStrand	43	chr2	28985799	28985838	protein_coding	Setx	exon	ENSMUSG00000043535	ProperStrand	187	3	-inf
chr4	116827663	116828196	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	chr14	76956323	76956339	protein_coding	Serp2	utr5	ENSMUSG00000052584	NonProperStrand	41	1	-11.1264
chr3	95149518	95150550	protein_coding	Setdb1	exon	ENSMUSG00000015697	NonProperStrand	4	chr6	71832637	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-11.2428
chr9	26440743	26440759	DNA	MER5A	MER1_type	chr9MER5A26440741	ProperStrand	108	chr7	106627966	106628428	protein_coding	Rps3	exon	ENSMUSG00000030744	ProperStrand	159	1	-10.1772
chr8	126012147	126012222	protein_coding	Afg3l1	exon	ENSMUSG00000031967	ProperStrand	29	chr19	8799846	8799882	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-6.3764
chr19	5801072	5801140	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr16	37777390	37777408	protein_coding	Fstl1	exon	ENSMUSG00000022816	ProperStrand	179	1	-5.3908
chr2	24910034	24910050	protein_coding	Nelf	utr5	ENSMUSG00000006476	NonProperStrand	20	chr19	8963116	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.2716
chr3	88715213	88715230	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr12	16946835	16946922	snoRNA	ENSMUSG00000064620_SNORA32	.	ENSMUSG00000064620	ProperStrand	165	3	-12.2521
chr15	85697925	85698015	protein_coding	Gtse1	exon	ENSMUSG00000022385	ProperStrand	74	chr4	131865855	131865935	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.4533
chr13	79659338	79659354	LTR	RodERV21-int	ERV1	chr13RodERV21-int79658190	ProperStrand	43	chr7	52713404	52713457	protein_coding	Ftl1	utr3	ENSMUSG00000050708	ProperStrand	807	1	-8.7851
chr14	45949538	45949554	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	chr16	33057243	33057484	protein_coding	Rpl35a	utr5	ENSMUSG00000060636	ProperStrand	33	1	-11.1284
chr10	60562556	60562606	protein_coding	Sgpl1	utr3	ENSMUSG00000020097	ProperStrand	34	chr2	158185529	158185596	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	6	-18.7606
chr1	158860392	158860434	protein_coding	Ralgps2	intron	ENSMUSG00000026594	ProperStrand	16	chr2	22444692	22444796	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	4	-19.6214
chr2	28368986	28369003	protein_coding	Ralgds	utr5	ENSMUSG00000026821	NonProperStrand	60	chr11	62416575	62416644	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-5.1663
chr4	155124288	155124338	protein_coding	Atad3a	exon	ENSMUSG00000029036	ProperStrand	28	chr2	26493393	26493449	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-8.5846
chr4	116875171	116875249	snRNA	ENSMUSG00000070228_U5	.	ENSMUSG00000070228	ProperStrand	131	chr9	15118319	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-3.7782
chr8	88360331	88362857	protein_coding	Itfg1	exon	ENSMUSG00000031703	ProperStrand	38	chr4	131908361	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	12	-inf
chr8	127993731	127993748	protein_coding	Sipa1l2	exon	ENSMUSG00000001995	NonProperStrand	8	chr3	68889048	68889108	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-7.2271
chr11	95823875	95823975	protein_coding	Igf2bp1	utr3	ENSMUSG00000013415	ProperStrand	140	chr1	162965548	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.8323
chr7	109149271	109149287	protein_coding	Numa1	exon	ENSMUSG00000066306	NonProperStrand	171	chr12	92811953	92812003	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	1	-6.4899
chrX	39029535	39029552	protein_coding	Gria3	utr3	ENSMUSG00000001986	ProperStrand	32	chr2	26494763	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.2767
chr10	52101856	52101872	protein_coding	Gopc	utr5	ENSMUSG00000019861	ProperStrand	4	chr19	8799601	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-12.4240
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chrX	70922065	70922096	protein_coding	Slc6a8	exon	ENSMUSG00000019558	ProperStrand	47	1	-9.0960
chr13	59737820	59737846	protein_coding	Golm1	utr3	ENSMUSG00000021556	ProperStrand	27	chr8	129468745	129468835	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	5	-21.0726
chr13	25354120	25354136	protein_coding	Nrsn1	exon	ENSMUSG00000048978	ProperStrand	24	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-13.5421
chr5	31505185	31505285	protein_coding	Ppm1g	utr3	ENSMUSG00000029147	ProperStrand	69	chr3	123210854	123210919	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.8430
chr2	31039146	31040368	protein_coding	Gpr107	exon	ENSMUSG00000000194	ProperStrand	99	chr6	115757992	115758082	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-4.5046
chr9	65507833	65507873	protein_coding	Rbpms2	utr3	ENSMUSG00000032387	ProperStrand	85	chr9	15118323	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	4	-9.9241
chr16	35871309	35871326	protein_coding	Parp14	exon	ENSMUSG00000034422	ProperStrand	7	chr18	35716762	35716829	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-6.2708
chr17	95160908	95218242	protein_coding	2610044O15Rik	exon	ENSMUSG00000066057	NonProperStrand	70	chr7	116664794	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-6.1452
chr5	116012537	116012569	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	chr19	8798754	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	4	-7.4723
chr14	102311284	102312463	protein_coding	Lmo7	exon	ENSMUSG00000033060	ProperStrand	16	chr15	5068425	5068480	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-8.7240
chr16	15736748	15736766	protein_coding	Prkdc	intron	ENSMUSG00000022672	NonProperStrand	24	chr8	119562011	119562029	protein_coding	Pkd1l2	exon	ENSMUSG00000034416	ProperStrand	5	1	-19.0819
chr10	62750649	62750693	protein_coding	Herc4	exon	ENSMUSG00000020064	ProperStrand	14	chr15	98356819	98356847	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	1	-10.7065
chr14	56244800	56244827	protein_coding	Ipo4	exon	ENSMUSG00000002319	ProperStrand	62	chr19	7100797	7100858	protein_coding	Stip1	exon	ENSMUSG00000024966	ProperStrand	100	1	-12.2224
chr4	129322666	129322701	protein_coding	Kpna6	utr3	ENSMUSG00000003731	ProperStrand	39	chr8	129468785	129468875	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-5.2462
chr9	59525936	59525953	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr2	118611946	118611962	protein_coding	Disp2	exon	ENSMUSG00000040035	NonProperStrand	204	1	-4.7824
chr17	80600914	80600941	protein_coding	Srsf7	exon	ENSMUSG00000024097	ProperStrand	31	chr19	8963027	8963059	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.4420
chr2	90235290	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr15	100416584	100416600	protein_coding	Pou6f1	intron	ENSMUSG00000009739	ProperStrand	44	1	-5.0608
chr11	118900007	118900023	protein_coding	Cbx8	exon	ENSMUSG00000025578	ProperStrand	95	chr17	24857750	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.5682
chr6	3997492	3997510	LTR	MTE2b	MaLR	chr6MTE2b3997304	ProperStrand	1	chr2	25150532	25150672	protein_coding	Grin1	intron	ENSMUSG00000026959	ProperStrand	9	1	-inf
chr1	88252716	88253006	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chr11	106362672	106362693	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-1.8539
chr2	26493411	26495644	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr11	62416600	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	8	-3.8863
chr16	89833298	89833412	protein_coding	Tiam1	exon	ENSMUSG00000002489	NonProperStrand	26	chr11	55296289	55296332	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	NonProperStrand	5	1	-19.8893
chr9	58547119	58547136	protein_coding	2410076I21Rik	intron	ENSMUSG00000074269	ProperStrand	91	chr3	68889187	68889216	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-2.5212
chr11	97551779	97551869	protein_coding	Pcgf2	intron	ENSMUSG00000018537	ProperStrand	31	chr6	115758052	115758132	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-6.7781
chr2	26768367	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	chr5	108336362	108336495	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	11	-3.6439
chr12	112559188	112559288	protein_coding	Cdc42bpb	exon	ENSMUSG00000021279	ProperStrand	128	chr5	121655132	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.3963
chr13	21845481	21845581	protein_coding	Hist1h2ak	exon	ENSMUSG00000063021	ProperStrand	30	chr1	162965537	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.5795
chr9	20896220	20896255	protein_coding	Raver1	exon	ENSMUSG00000010205	ProperStrand	69	chr8	73419649	73419712	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-7.4124
chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	chr10	39978408	39978485	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-2.2003
chr2	158182156	158182182	lincRNA	9430008C03Rik	intron	ENSMUSG00000085385	NonProperStrand	4	chr11	97643008	97643061	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	NonProperStrand	10	1	-19.3291
mmu-miR-6240	2	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr1	66521957	66521973	protein_coding	Unc80	intron	ENSMUSG00000055567	NonProperStrand	212	1	-3.4941
chr9	20600289	20600403	protein_coding	Col5a3	exon	ENSMUSG00000004098	NonProperStrand	14	chr2	26494708	26494802	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	4	-18.4384
chr10	75965433	75965501	protein_coding	Mcm3ap	exon	ENSMUSG00000001150	ProperStrand	95	chr15	5068407	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	4	-15.9901
chr1	89614569	89614657	protein_coding	Inpp5d	exon	ENSMUSG00000026288	ProperStrand	75	chr5	111121083	111121173	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	2	-9.7463
chr9	58388575	58388665	protein_coding	Cd276	utr5	ENSMUSG00000035914	ProperStrand	19	chr15	38008367	38008385	protein_coding	Ubr5	utr5	ENSMUSG00000037487	ProperStrand	258	2	-20.1561
chr1	88423346	88423436	protein_coding	Ptma	utr5	ENSMUSG00000026238	ProperStrand	385	chr15	57978182	57978262	snoRNA	ENSMUSG00000080461_SNORA11	.	ENSMUSG00000080461	ProperStrand	171	1	-7.4988
chr2	26493364	26493481	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr12	92811921	92812014	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	6	-4.2042
chr5	111213711	111213756	protein_coding	Ulk1	utr3	ENSMUSG00000029512	ProperStrand	92	chr1	88247740	88247770	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-4.2768
chr10	107846596	107846639	protein_coding	Pawr	exon	ENSMUSG00000035873	ProperStrand	39	chr19	47970971	47970987	protein_coding	Itprip	utr3	ENSMUSG00000079254	ProperStrand	75	1	-13.7350
chr12	13247433	13247680	protein_coding	Ddx1	exon	ENSMUSG00000037149	ProperStrand	47	chr4	149026816	149026832	protein_coding	Pik3cd	exon	ENSMUSG00000039936	ProperStrand	151	1	-11.9540
chr14	31382312	31383188	protein_coding	Tkt	exon	ENSMUSG00000021957	ProperStrand	160	chr16	30514154	30514171	protein_coding	Tmem44	utr3	ENSMUSG00000022537	ProperStrand	217	1	-8.7704
chr5	136210991	136211099	protein_coding	Por	utr3	ENSMUSG00000005514	ProperStrand	42	chr4	131865938	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-6.3102
chr5	86946760	86946782	protein_coding	Tmprss11g	intron	ENSMUSG00000079451	NonProperStrand	1	chr18	35714196	35714286	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-inf
chrX	159257017	159257080	protein_coding	Txlng	intron	ENSMUSG00000038344	ProperStrand	45	chr1	89681378	89681396	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	7	-inf
chr4	137813144	137813162	protein_coding	Sh2d5	exon	ENSMUSG00000045349	NonProperStrand	31	chr16	23110900	23110972	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0062
chr11	94003041	94003129	lincRNA	B230206L02Rik	intron	ENSMUSG00000086003	ProperStrand	13	chr4	132530098	132530117	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	2	-inf
chr4	115742574	115747534	protein_coding	Uqcrh	exon	ENSMUSG00000063882	ProperStrand	6	chr6	87982782	87982842	protein_coding	Rab7	intron	ENSMUSG00000079477	ProperStrand	33	1	-18.5509
chr2	60087031	60087103	protein_coding	March7	utr3	ENSMUSG00000026977	ProperStrand	8	chr10	23505258	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.7871
chr7	117190029	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	chr5	108333643	108333665	snoRNA	ENSMUSG00000064453_Snord21	.	ENSMUSG00000064453	ProperStrand	201	2	-2.5457
chr6	77195102	77195119	protein_coding	Lrrtm1	exon	ENSMUSG00000060780	ProperStrand	19	chr3	123210912	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-6.9819
chr10	7639999	7640029	protein_coding	Tab2	exon	ENSMUSG00000015755	ProperStrand	41	chr5	130300492	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.1822
chr19	10939999	10940037	protein_coding	Tmem132a	exon	ENSMUSG00000024736	ProperStrand	26	chr10	23506278	23506334	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	2	-13.7434
chr14	8799019	8799036	protein_coding	Dnase1l3	utr3	ENSMUSG00000025279	NonProperStrand	4	chr9	120038552	120038607	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-8.5118
chr11	96180923	96180944	protein_coding	Hoxb4	intron	ENSMUSG00000038692	ProperStrand	2	chr11	6428088	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-10.4671
chr13	8766376	8766399	protein_coding	Adarb2	utr3	ENSMUSG00000052551	NonProperStrand	61	chr4	122970404	122970480	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	2	-11.8418
chr17	17130820	17130900	LINE	L1_Mur2	L1	chr17L1_Mur217130724	ProperStrand	1	chr17	17131271	17131361	SINE	B2_Mm2	B2	chr17B2_Mm217131170	ProperStrand	1	1	-inf
chr11	29460641	29460739	protein_coding	1700034F02Rik	exon	ENSMUSG00000020461	NonProperStrand	3	chr9	120037980	120038027	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-10.9964
chr16	30571434	30571486	protein_coding	Lsg1	exon	ENSMUSG00000022538	ProperStrand	25	chr15	79908930	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-7.2107
chr19	8798737	8798759	lincRNA	Snhg1	exon	ENSMUSG00000090867	ProperStrand	100	chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	1	-7.8188
chr10	79895054	79895134	protein_coding	Tcf3	intron	ENSMUSG00000020167	ProperStrand	73	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	4	-7.7549
chr9	67788295	67788330	protein_coding	Vps13c	exon	ENSMUSG00000035284	ProperStrand	69	chr17	35089181	35089210	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-5.2128
chr8	3803251	3803331	misc_RNA	RNaseP_nuc	.	ENSMUSG00000088025	ProperStrand	328	chr1	38076140	38076230	protein_coding	Eif5b	exon	ENSMUSG00000026083	ProperStrand	118	1	-8.5551
chr9	108465799	108465965	protein_coding	Impdh2	exon	ENSMUSG00000062867	ProperStrand	74	chr9	120038609	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.6690
chr2	62528098	62528498	protein_coding	Gca	exon	ENSMUSG00000026893	ProperStrand	8	chr5	76728832	76728848	protein_coding	Clock	intron	ENSMUSG00000029238	NonProperStrand	64	1	-17.1469
chr16	20559803	20560001	protein_coding	Abcf3	exon	ENSMUSG00000003234	NonProperStrand	2	chr5	108336363	108336459	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-12.2768
chr9	43047660	43047678	protein_coding	Oaf	utr5	ENSMUSG00000032014	NonProperStrand	11	chr6	71832550	71832577	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	3	-19.3880
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	10401231	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	6	-5.0958
chr9	78023109	78023148	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr5	143754410	143754479	protein_coding	Rnf216	exon	ENSMUSG00000045078	ProperStrand	38	1	-6.7824
chr10	79608407	79608499	protein_coding	Atp5d	utr3	ENSMUSG00000003072	ProperStrand	44	chr17	13112516	13112545	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	2	-8.5286
chr6	67233906	67233996	protein_coding	Serbp1	utr3	ENSMUSG00000036371	ProperStrand	261	chr7	51505507	51505587	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	2	-9.5406
chr3	96218384	96218474	misc_RNA	Telomerase-vert	.	ENSMUSG00000064796	ProperStrand	443	chr7	20318511	20323363	protein_coding	Pvrl2	exon	ENSMUSG00000062300	ProperStrand	110	1	-8.0976
chr12	87865704	87865722	SINE	RSINE1	B4	chr12RSINE187865630	ProperStrand	36	chr2	26494708	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.0523
chr9	15119292	15119369	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	chr12	81492598	81492642	snoRNA	ENSMUSG00000088158_Scarna3b	.	ENSMUSG00000088158	ProperStrand	147	3	-8.5041
chr9	120482887	120483263	protein_coding	Rpl14	exon	ENSMUSG00000025794	ProperStrand	123	chr4	139189690	139189715	protein_coding	Aldh4a1	exon	ENSMUSG00000028737	ProperStrand	20	1	-14.1037
chr7	127517246	127517262	protein_coding	Abca15	utr3	ENSMUSG00000054746	NonProperStrand	2	chr16	23110918	23110972	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr7	125988118	125988182	protein_coding	2310008H09Rik	utr3	ENSMUSG00000030980	ProperStrand	42	chr15	98350161	98350251	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-5.4538
chr1	138382212	138382230	protein_coding	Kif14	intron	ENSMUSG00000041498	NonProperStrand	36	chr7	150717298	150717424	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-6.5149
chr19	8799581	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	chr11	62418030	62418089	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	3	-1.4820
chr15	88911203	88911234	protein_coding	Trabd	intron	ENSMUSG00000015363	ProperStrand	12	chr2	4974190	4974207	protein_coding	Optn	exon	ENSMUSG00000026672	ProperStrand	451	1	-12.5569
chr2	138188029	138188045	protein_coding	Btbd3	intron	ENSMUSG00000062098	NonProperStrand	121	chr3	123210926	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.0404
chr9	113580891	113580975	protein_coding	Pdcd6ip	exon	ENSMUSG00000032504	ProperStrand	53	chr16	23110524	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.6756
chr12	17552949	17553090	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr11	6428035	6428169	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	32	-5.2900
chr8	46855240	46855906	protein_coding	Sorbs2	exon	ENSMUSG00000031626	ProperStrand	50	chr9	70960077	70960093	protein_coding	Aqp9	exon	ENSMUSG00000032204	NonProperStrand	118	1	-12.3228
chr12	16946884	16946930	protein_coding	Rock2	intron	ENSMUSG00000020580	ProperStrand	27	chr7	67125755	67125830	snoRNA	ENSMUSG00000089375_Snord107	.	ENSMUSG00000089375	ProperStrand	451	5	-inf
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr4	130305568	130305620	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	1	-7.0169
chr11	53102624	53105808	protein_coding	Hspa4	exon	ENSMUSG00000020361	ProperStrand	69	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.1324
chrX	20510924	20510967	protein_coding	Elk1	utr3	ENSMUSG00000009406	ProperStrand	6	chr10	60692417	60692433	protein_coding	Adamts14	exon	ENSMUSG00000059901	NonProperStrand	127	1	-16.5464
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chrX	20258470	20258570	protein_coding	Uba1	exon	ENSMUSG00000001924	ProperStrand	156	1	-4.5113
chr16	90221098	90221143	protein_coding	Sod1	utr5	ENSMUSG00000022982	ProperStrand	75	chr19	9018593	9020258	protein_coding	Mta2	exon	ENSMUSG00000071646	ProperStrand	70	1	-12.5556
chr8	114536105	114536150	protein_coding	Terf2ip	intron	ENSMUSG00000033430	ProperStrand	4	chr1	33828651	33828669	protein_coding	Zfp451	intron	ENSMUSG00000042197	NonProperStrand	393	1	-15.2153
chr15	102147120	102147165	protein_coding	Espl1	exon	ENSMUSG00000058290	ProperStrand	172	chr12	106269340	106269403	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-2.2539
chr14	76920368	76920384	lincRNA	4930444M15Rik	exon	ENSMUSG00000085974	NonProperStrand	14	chr7	52085266	52085298	protein_coding	Nup62	exon	ENSMUSG00000043858	ProperStrand	47	1	-16.9316
chr5	65136119	65136136	LTR	ORR1D2-int	MaLR	chr5ORR1D2-int65135280	ProperStrand	30	chr11	120208655	120208996	protein_coding	Actg1	exon	ENSMUSG00000062825	ProperStrand	178	1	-12.5328
chr18	67476546	67476603	protein_coding	Impa2	exon	ENSMUSG00000024525	ProperStrand	31	chr8	73115775	73115791	protein_coding	Ell	utr3	ENSMUSG00000070002	NonProperStrand	134	1	-13.0351
chr4	81936716	81936732	protein_coding	Nfib	utr3	ENSMUSG00000008575	NonProperStrand	10	chr5	141090405	141090422	protein_coding	Lfng	exon	ENSMUSG00000029570	NonProperStrand	92	1	-16.1561
chr12	85655160	85655178	protein_coding	Ptgr2	utr3	ENSMUSG00000072946	ProperStrand	5	chr3	123210861	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-16.6642
chr7	117844168	117844248	DNA	URR1A	MER1_type	chr7URR1A117844081	NonProperStrand	1	chr4	128209782	128209872	protein_coding	Csmd2	intron	ENSMUSG00000028804	NonProperStrand	34	1	-inf
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr14	76247738	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	6	-0.8808
chr8	127407452	127407468	protein_coding	Gnpat	exon	ENSMUSG00000031985	NonProperStrand	13	chr7	29136525	29136548	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.2243
chr4	131865379	131865857	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	chr3	123210851	123210987	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	78	-2.1357
chr17	47075606	47075622	protein_coding	Ubr2	exon	ENSMUSG00000023977	ProperStrand	172	chr7	148633552	148633836	protein_coding	Rplp2	utr5	ENSMUSG00000025508	ProperStrand	106	1	-10.0575
chr16	91227718	91227735	protein_coding	Olig2	utr3	ENSMUSG00000039830	NonProperStrand	78	chr4	131908356	131908439	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.0614
chr11	3255891	3255981	protein_coding	Limk2	utr5	ENSMUSG00000020451	ProperStrand	100	chr5	130300473	130300553	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.6803
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chrX	71589886	71589908	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	1	-3.9655
chr7	50434411	50434511	SINE	B2_Mm1t	B2	chr7B2_Mm1t50434351	NonProperStrand	1	chr7	117166807	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-inf
chr18	56743964	56743981	protein_coding	Phax	exon	ENSMUSG00000008301	ProperStrand	22	chr7	134110716	134111233	protein_coding	Sez6l2	exon	ENSMUSG00000030683	ProperStrand	94	1	-14.4392
chr11	118635775	118635796	protein_coding	Rbfox3	intron	ENSMUSG00000025576	ProperStrand	19	chr10	23505168	23505279	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.1073
chr17	29631871	29631916	protein_coding	Pim1	utr3	ENSMUSG00000024014	ProperStrand	13	chr2	157089654	157089670	protein_coding	4922505G16Rik	intron	ENSMUSG00000074627	NonProperStrand	2	1	-inf
chr11	102858692	102858732	protein_coding	Dcakd	exon	ENSMUSG00000020935	ProperStrand	61	chr16	23110528	23110577	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.4335
chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	chr15	88926057	88926131	protein_coding	1300018J18Rik	exon	ENSMUSG00000035757	ProperStrand	7	4	-23.0885
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	170156918	170156935	protein_coding	Pbx1	intron	ENSMUSG00000052534	NonProperStrand	9	2	-13.3409
chr5	65859733	65883983	protein_coding	1110003E01Rik	utr5	ENSMUSG00000037822	ProperStrand	10	chr16	23110896	23110940	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.7978
mmu-miR-6240	3	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr5	81450860	81450881	protein_coding	Lphn3	utr5	ENSMUSG00000037605	ProperStrand	19	1	-8.2060
chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	chr9	120037897	120037933	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-1.5864
chr2	109516160	109516176	protein_coding	Bdnf	utr5	ENSMUSG00000048482	NonProperStrand	47	chr11	6428099	6428157	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.6401
chr19	8798483	8798553	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	chr8	73419654	73419778	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	19	-0.7124
chrX	84483699	84483730	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr1	53219102	53219119	protein_coding	1700019A02Rik	intron	ENSMUSG00000060715	ProperStrand	23	1	-10.1848
chr15	100358955	100358971	protein_coding	Tfcp2	exon	ENSMUSG00000009733	NonProperStrand	77	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-10.2617
chr2	120445465	120445486	protein_coding	Haus2	utr3	ENSMUSG00000027285	ProperStrand	7	chr16	23110880	23111001	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-6.1472
chr8	125626932	125626973	snoRNA	ENSMUSG00000064450_Snord68	.	ENSMUSG00000064450	NonProperStrand	2	chr16	23110505	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	NonProperStrand	16	1	-inf
chr15	81517712	81517729	protein_coding	L3mbtl2	utr3	ENSMUSG00000022394	ProperStrand	19	chr15	82000222	82000274	protein_coding	Srebf2	exon	ENSMUSG00000022463	ProperStrand	592	1	-11.0612
chr19	27837820	27837836	protein_coding	Rfx3	utr3	ENSMUSG00000040929	ProperStrand	92	chr3	88715213	88715230	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-6.3871
chr11	120148960	120148976	protein_coding	Bahcc1	exon	ENSMUSG00000039741	NonProperStrand	268	chr2	144087376	144087462	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-3.6647
chr18	38747066	38747098	protein_coding	Spry4	utr3	ENSMUSG00000024427	ProperStrand	24	chr16	23111772	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.4982
chr19	8800361	8800451	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	chr13	62644610	62644696	snoRNA	ENSMUSG00000075946_SNORA25	.	ENSMUSG00000075946	ProperStrand	11	1	-6.8583
chrX	98600247	98600264	protein_coding	Zmym3	utr3	ENSMUSG00000031310	ProperStrand	17	chr15	79908954	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-7.9934
chr8	13390068	13390084	protein_coding	Atp4b	exon	ENSMUSG00000031449	ProperStrand	2	chr8	73419657	73419757	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-inf
chr17	46814084	46937449	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr1	162966813	162966857	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	2	-4.3036
chr9	60400610	60400626	LTR	MTE2a	MaLR	chr9MTE2a60400524	NonProperStrand	2	chr6	85412078	85412149	protein_coding	Cct7	exon	ENSMUSG00000030007	ProperStrand	173	2	-inf
chr4	154961588	154961796	protein_coding	Nadk	exon	ENSMUSG00000029063	ProperStrand	25	chr4	56910496	56910588	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	2	-12.5909
chr8	73438251	73438331	protein_coding	Mtap1s	exon	ENSMUSG00000019261	ProperStrand	60	chr4	56819129	56819147	protein_coding	BC026590	utr3	ENSMUSG00000038827	NonProperStrand	50	1	-13.6785
chr1	151348424	151348442	LINE	Lx6	L1	chr1Lx6151347661	NonProperStrand	1	chr7	29137600	29137639	protein_coding	Rps16	exon	ENSMUSG00000037563	ProperStrand	191	1	-inf
chrX	49970851	49970867	antisense	A630012P03Rik	.	ENSMUSG00000055110	NonProperStrand	10	chr17	35841698	35841716	antisense	Gm4577	.	ENSMUSG00000086867	ProperStrand	1	1	-inf
chr9	42847748	42847765	protein_coding	Arhgef12	intron	ENSMUSG00000059495	ProperStrand	16	chr1	9932546	9932599	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-10.4060
chr3	87719343	87719369	protein_coding	Hdgf	utr3	ENSMUSG00000004897	ProperStrand	117	chr16	10583851	10583941	protein_coding	Clec16a	intron	ENSMUSG00000068663	ProperStrand	24	3	-19.4200
chr3	33709308	33709331	protein_coding	Ttc14	utr3	ENSMUSG00000027677	ProperStrand	25	chr2	32818836	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	6	-21.4427
chrX	72354480	72354570	protein_coding	Dkc1	utr3	ENSMUSG00000031403	ProperStrand	89	chr7	52632637	52632794	protein_coding	Snrnp70	utr5	ENSMUSG00000063511	ProperStrand	61	5	-19.1548
chr13	98259638	98259715	lincRNA	Gm11019	intron	ENSMUSG00000078952	ProperStrand	113	chr9	120039587	120039677	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.2143
chrX	93136011	93147390	protein_coding	Las1l	exon	ENSMUSG00000057421	ProperStrand	248	chr5	121655051	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-2.5826
chr17	56552474	56552537	protein_coding	Ptprs	utr3	ENSMUSG00000013236	ProperStrand	152	chr5	121655027	121655087	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.1115
chr14	8999250	8999350	protein_coding	Pdhb	exon	ENSMUSG00000021748	ProperStrand	28	chr14	63287571	63287607	snoRNA	ENSMUSG00000089531_SNORA73	.	ENSMUSG00000089531	ProperStrand	123	2	-19.8001
chr2	29926567	29926594	protein_coding	Set	utr3	ENSMUSG00000054766	ProperStrand	167	chr11	6428123	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.4957
chr16	23111806	23111833	protein_coding	Eif4a2	intron	ENSMUSG00000022884	ProperStrand	356	chr4	122968584	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-2.9089
chrX	98643418	98643478	protein_coding	Nono	utr3	ENSMUSG00000031311	ProperStrand	102	chr1	162965529	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	5	-11.0786
chr9	21158766	21158888	protein_coding	Slc44a2	utr3	ENSMUSG00000057193	ProperStrand	26	chr16	23110970	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.4162
chr4	108691566	108691591	protein_coding	Nrd1	exon	ENSMUSG00000053510	ProperStrand	76	chr11	69483136	69483262	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.0566
chr19	11861100	11862725	protein_coding	Stx3	exon	ENSMUSG00000041488	ProperStrand	37	chr11	69481352	69481432	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-4.0982
chr11	98878370	98878429	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	chr4	116827118	116827187	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-0.8497
chr6	134097815	134097831	protein_coding	Etv6	intron	ENSMUSG00000030199	NonProperStrand	77	chr7	123476682	123476706	snoRNA	ENSMUSG00000064741_Snord14a	.	ENSMUSG00000064741	ProperStrand	83	1	-12.1592
chr18	38016155	38063057	protein_coding	Diap1	exon	ENSMUSG00000024456	ProperStrand	77	chr18	35716702	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-5.0067
chr16	72800514	72800532	protein_coding	Robo1	intron	ENSMUSG00000022883	NonProperStrand	188	chr12	3504294	3504339	protein_coding	Asxl2	utr3	ENSMUSG00000037486	ProperStrand	21	1	-13.1498
chr8	44380942	44381067	protein_coding	Zfp42	exon	ENSMUSG00000051176	ProperStrand	127	chr1	59761682	59761716	snoRNA	ENSMUSG00000089093_Snord11	.	ENSMUSG00000089093	ProperStrand	193	5	-inf
chr2	84530865	84531297	protein_coding	Zdhhc5	exon	ENSMUSG00000034075	NonProperStrand	144	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-7.1812
chr7	148634800	148634846	protein_coding-noncoding	Rplp2	utr5	ENSMUSG00000025508	ProperStrand	11	chr10	62724659	62724760	protein_coding	Herc4	intron	ENSMUSG00000020064	ProperStrand	14	1	-inf
chr19	52519496	52519512	LINE	Lx8	L1	chr19Lx852519309	ProperStrand	1	chr18	73954123	73954169	protein_coding	Me2	exon	ENSMUSG00000024556	ProperStrand	22	1	-inf
chr1	136521592	136521692	protein_coding	Kdm5b	utr5	ENSMUSG00000042207	ProperStrand	223	chr7	19489304	19489329	protein_coding	Ccdc61	intron	ENSMUSG00000074358	ProperStrand	27	1	-12.2960
chr13	63635703	63640627	protein_coding	Ptch1	exon	ENSMUSG00000021466	ProperStrand	50	chr2	26493364	26493420	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-4.0847
chr6	24684480	24684497	protein_coding	Hyal6	exon	ENSMUSG00000029679	NonProperStrand	114	chr11	55296259	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	2	-8.1262
chr7	80116797	80116887	DNA	MER58B	MER1_type	chr7MER58B80116702	NonProperStrand	1	chr7	80116486	80116566	SINE	MIRb	MIR	chr7MIRb80116413	NonProperStrand	1	1	-inf
chr10	83200611	83200629	protein_coding	1500009L16Rik	intron	ENSMUSG00000087651	ProperStrand	13	chr4	122968646	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-9.3701
chr8	108873001	108873021	lincRNA	Gm17245	intron	ENSMUSG00000067626	ProperStrand	27	chr4	131865867	131865965	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.1241
chr13	55696841	55696931	protein_coding	Tmed9	exon	ENSMUSG00000058569	ProperStrand	35	chr11	69483153	69483233	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.4080
chr1	88423479	88426545	protein_coding	Ptma	utr5	ENSMUSG00000026238	ProperStrand	385	chr4	131866208	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	4	-3.7918
chr12	49954325	49954405	LTR	RLTR13B1	ERVK	chr12RLTR13B149954054	NonProperStrand	1	chr12	49953966	49954056	LTR	RMER20B	ERVK	chr12RMER20B49953892	ProperStrand	1	1	-inf
chr11	77996559	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	chr4	122970425	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	4	-4.4600
chr16	27278279	27278369	LINE	L2	L2	chr16L227278303	ProperStrand	1	chr16	27278427	27278517	LTR	RMER2	ERV1	chr16RMER227278411	ProperStrand	1	1	-inf
chr16	23110993	23111009	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr5	143667271	143667330	protein_coding	Actb	exon	ENSMUSG00000029580	ProperStrand	446	1	-5.0546
chr5	8807763	8807838	protein_coding	Abcb1b	intron	ENSMUSG00000028970	ProperStrand	7	chr1	162967506	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-12.6263
chr11	63094029	63094109	LTR	MTC	MaLR	chr11MTC63093845	NonProperStrand	1	chr11	63094148	63094238	SINE	B1_Mus1	Alu	chr11B1_Mus163094150	ProperStrand	1	1	-inf
chr8	125741087	125741105	protein_coding	4732415M23Rik	intron	ENSMUSG00000048478	ProperStrand	88	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-6.9775
chr13	12313758	12313814	protein_coding	Mtr	exon	ENSMUSG00000021311	ProperStrand	22	chr18	35102305	35102367	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-8.6037
chr12	77383918	77383967	protein_coding	Mthfd1	exon	ENSMUSG00000021048	ProperStrand	71	chr1	185857228	185857244	protein_coding	1700056E22Rik	exon	ENSMUSG00000044854	ProperStrand	173	1	-10.8502
chr5	115940292	115940406	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	chr12	112779189	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	2	-1.8719
chr15	4003824	4007674	protein_coding	Oxct1	exon	ENSMUSG00000022186	ProperStrand	48	chr3	88786398	88786417	protein_coding	Ash1l	exon	ENSMUSG00000028053	NonProperStrand	50	2	-19.4454
chr9	20947658	20954288	protein_coding	Cdc37	exon	ENSMUSG00000019471	ProperStrand	97	chr2	158203987	158204053	snoRNA	ENSMUSG00000065840_SNORA71	.	ENSMUSG00000065840	ProperStrand	107	1	-11.1860
chr2	83693562	83693578	protein_coding	Fam171b	exon	ENSMUSG00000048388	NonProperStrand	175	chr9	15119631	15119693	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-0.9996
chr7	148587822	148587870	protein_coding	Taldo1	exon	ENSMUSG00000025503	ProperStrand	28	chr16	23110831	23110872	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.2442
chr11	8479572	8479662	protein_coding	Tns3	intron	ENSMUSG00000020422	ProperStrand	81	chr13	63973596	63973676	protein_coding	0610007P08Rik	exon	ENSMUSG00000021470	ProperStrand	26	1	-14.3980
chr4	102649987	102656538	antisense	Gm12709	.	ENSMUSG00000085181	ProperStrand	10	chr8	98276534	98276596	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	2	-19.6746
chr3	11580450	11580467	LINE	Lx3A	L1	chr3Lx3A11580299	ProperStrand	53	chr3	153575112	153575168	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	1	-8.7440
chr17	6107131	6107149	protein_coding	Tulp4	intron	ENSMUSG00000034377	NonProperStrand	265	chr6	71832577	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-2.8253
chr19	6228071	6228161	protein_coding	Ppp2r5b	utr3	ENSMUSG00000024777	ProperStrand	4	chr4	131865873	131865953	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.0048
chr11	117516179	117516279	protein_coding	Tnrc6c	utr5	ENSMUSG00000025571	ProperStrand	51	chr2	26494708	26494732	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-5.8146
chr3	95465940	95465988	protein_coding	Mcl1	utr3	ENSMUSG00000038612	ProperStrand	75	chr10	41644311	41644329	protein_coding	Armc2	exon	ENSMUSG00000071324	ProperStrand	281	1	-9.7703
chr1	163758290	163758309	protein_coding	AI848100	exon	ENSMUSG00000040297	ProperStrand	12	chr11	69481333	69481473	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	3	-14.7772
chr5	45083103	45083119	protein_coding	Ldb2	intron	ENSMUSG00000039706	NonProperStrand	15	chr7	117189863	117189922	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-9.0015
chr16	33987639	33987656	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	chr17	39985356	39985498	pseudogene	AY036118	.	ENSMUSG00000045999	ProperStrand	57	1	-11.7883
chr2	26069651	26073204	protein_coding	Qsox2	exon	ENSMUSG00000036327	ProperStrand	24	chr16	23110852	23110932	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.3518
chr14	22267623	22267670	protein_coding	Adk	utr3	ENSMUSG00000039197	ProperStrand	32	chr9	15119632	15119722	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.7682
chr10	83990762	83990802	protein_coding	Ckap4	exon	ENSMUSG00000046841	ProperStrand	60	chr9	15118332	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.4666
chr15	25721727	25721827	protein_coding	Myo10	intron	ENSMUSG00000022272	ProperStrand	168	chr18	33954911	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-1.7450
chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	chr4	126600431	126600466	protein_coding	Zmym4	exon	ENSMUSG00000042446	ProperStrand	94	1	-7.9315
chr15	79913287	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr2	130103752	130103798	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	4	-1.7945
chr7	52071725	52071766	protein_coding	Nup62	utr5	ENSMUSG00000043858	ProperStrand	47	chr9	63042015	63042031	protein_coding	Map2k5	exon	ENSMUSG00000058444	ProperStrand	193	1	-11.4624
chr8	107783510	107783527	protein_coding	Tradd	exon	ENSMUSG00000031887	ProperStrand	23	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-9.6603
chr14	56159296	56159313	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	chr7	29136575	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-1.4386
chr11	6428054	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr14	76372286	76372426	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	12	-11.9434
chr13	23677438	23677528	protein_coding	Hist1h2be	utr3	ENSMUSG00000047246	ProperStrand	20	chr17	24857717	24857797	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	6	-19.4203
chr14	122026601	122026618	protein_coding	Dock9	exon	ENSMUSG00000025558	ProperStrand	38	chr16	23110963	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.5894
chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	3	-3.8503
chr2	179317854	179317870	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr11	62416606	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-3.1960
chr11	116535915	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr2	143780927	143782505	protein_coding	Rrbp1	exon	ENSMUSG00000027422	ProperStrand	76	3	-12.6898
chr14	55135025	55135380	protein_coding	Prmt5	exon	ENSMUSG00000023110	ProperStrand	72	chr4	149022419	149022436	protein_coding	Clstn1	utr3	ENSMUSG00000039953	NonProperStrand	4	2	-inf
chr7	25673415	25673458	protein_coding	Rps19	exon	ENSMUSG00000040952	ProperStrand	101	chr16	23111691	23111755	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.1422
chr7	106628073	106628173	snoRNA	ENSMUSG00000064966_Snord15b	.	ENSMUSG00000064966	ProperStrand	74	chr18	33954898	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-3.1238
chr5	84909223	84909239	LTR	RMER6C	ERVK	chr5RMER6C84908821	ProperStrand	1	chr4	134878232	134878322	protein_coding	Srrm1	exon	ENSMUSG00000028809	ProperStrand	142	1	-inf
chr15	78295593	78295612	protein_coding	Tmprss6	exon	ENSMUSG00000016942	NonProperStrand	6	chr2	145077954	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-12.4755
chr13	85352347	85352447	protein_coding	Ccnh	utr3	ENSMUSG00000021548	ProperStrand	2	chr15	74392750	74392768	protein_coding	Bai1	intron	ENSMUSG00000034730	NonProperStrand	56	1	-20.0935
chr19	8798735	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	chr19	8963027	8963183	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	48	-2.4918
chr11	55117140	55117156	protein_coding	Fat2	exon	ENSMUSG00000055333	NonProperStrand	11	chr11	69483195	69483282	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-13.4850
chr16	24984279	24984295	protein_coding	Lpp	utr3	ENSMUSG00000033306	ProperStrand	38	chr11	62418037	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	2	-10.4661
chr8	92871932	92871948	protein_coding	Tox3	utr5	ENSMUSG00000043668	ProperStrand	7	chr11	69483136	69483231	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-6.6014
chr8	91487251	91487268	SINE	B4	B4	chr8B491487097	ProperStrand	18	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-7.6092
chr18	34633327	34646680	protein_coding	Fam13b	exon	ENSMUSG00000036501	ProperStrand	30	chr11	69481335	69481425	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-4.4996
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr1	59539683	59539700	protein_coding	Fzd7	utr5	ENSMUSG00000041075	ProperStrand	373	1	-5.1106
chr10	17443077	17443095	protein_coding	Cited2	utr5	ENSMUSG00000039910	ProperStrand	64	chr1	63225260	63225322	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	3	-19.4324
chr2	172295284	172295344	protein_coding	2410001C21Rik	utr3	ENSMUSG00000027502	ProperStrand	8	chr4	131908688	131908722	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.7736
chr5	123616689	123616779	protein_coding	Setd1b	utr3	ENSMUSG00000038384	ProperStrand	11	chr4	122968593	122968673	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	2	-15.4656
chr15	36538349	36538474	protein_coding	Pabpc1	utr5	ENSMUSG00000022283	ProperStrand	908	chr16	37777391	37777408	protein_coding	Fstl1	exon	ENSMUSG00000022816	ProperStrand	179	2	-9.3246
chr3	97817679	97851651	protein_coding	Notch2	exon	ENSMUSG00000027878	ProperStrand	86	chr19	27837820	27837836	protein_coding	Rfx3	utr3	ENSMUSG00000040929	ProperStrand	92	1	-11.7316
chr6	87769189	87769558	protein_coding	Isy1	exon	ENSMUSG00000030056	ProperStrand	172	chr15	79912840	79912877	protein_coding	Rpl3	exon	ENSMUSG00000060036	ProperStrand	8342	1	-1.7816
chr15	6720161	6734127	protein_coding	Rictor	exon	ENSMUSG00000050310	ProperStrand	21	chr16	23110912	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-6.5949
chr2	143814118	143814180	protein_coding	Rrbp1	exon	ENSMUSG00000027422	ProperStrand	76	chr15	98350198	98350269	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	4	-13.7831
chr7	151667008	151667054	protein_coding	Ppfia1	exon	ENSMUSG00000037519	ProperStrand	32	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-7.9443
chr12	68766457	68766547	LINE	L1_Mus2	L1	chr12L1_Mus268766146	ProperStrand	12	chr18	35716764	35716846	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-8.5963
chr15	75879494	75879694	protein_coding	Scrib	exon	ENSMUSG00000022568	ProperStrand	154	chr11	97642952	97643014	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.0443
chr1	152240557	152240657	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	chr11	62590593	62590630	snoRNA	ENSMUSG00000064692_SNORA67	.	ENSMUSG00000064692	ProperStrand	185	1	-6.6678
chr15	96520502	96520557	protein_coding	Slc38a2	utr3	ENSMUSG00000022462	ProperStrand	133	chr9	63868722	63868738	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	1	-7.0013
chr13	56353448	56353465	protein_coding	Neurog1	utr5	ENSMUSG00000048904	ProperStrand	105	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-10.5612
chr4	140121137	140121153	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	chr19	8800377	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-2.1004
chr17	24762255	24763249	protein_coding	Tsc2	exon	ENSMUSG00000002496	ProperStrand	27	chr6	148869743	148869787	protein_coding	Fam60a	utr3	ENSMUSG00000039985	ProperStrand	68	4	-19.8262
chr7	147282923	147282992	protein_coding	1810014F10Rik	utr3	ENSMUSG00000025466	ProperStrand	1	chr12	102297023	102297040	protein_coding	Smek1	exon	ENSMUSG00000041846	ProperStrand	66	1	-inf
chr7	30977589	30977901	protein_coding	Capns1	exon	ENSMUSG00000001794	ProperStrand	35	chr4	131908300	131908357	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.2627
chr16	62641131	62641221	LINE	Lx8	L1	chr16Lx862640784	NonProperStrand	1	chr16	62641353	62641433	LTR	RMER17B	ERVK	chr16RMER17B62641222	ProperStrand	1	1	-inf
chr9	65086006	65086040	protein_coding	Parp16	utr3	ENSMUSG00000032392	ProperStrand	6	chr4	131908689	131908739	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.3738
chr6	50299740	50299757	protein_coding	Osbpl3	intron	ENSMUSG00000029822	ProperStrand	34	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.7115
chr14	78371462	78371483	protein_coding	Epsti1	intron	ENSMUSG00000022014	ProperStrand	2	chr11	62418013	62418054	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-12.9780
chr9	66410389	66410472	protein_coding	Usp3	exon	ENSMUSG00000032376	ProperStrand	18	chr4	131865935	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.8813
chr4	43505849	43505929	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr19	4153926	4154016	protein_coding	Coro1b	utr3	ENSMUSG00000024835	ProperStrand	13	1	-6.0161
chr2	68088827	68088845	protein_coding	Stk39	intron	ENSMUSG00000027030	NonProperStrand	9	chr4	131908753	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.5343
chr8	103289498	103289516	Simple_repeat	(CA)n	Simple_repeat	chr8(CA)n103289418	ProperStrand	10	chr7	150717298	150717348	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	3	-20.8273
chr7	135123679	135124713	protein_coding	Fus	exon	ENSMUSG00000030795	ProperStrand	162	chr7	117166747	117166827	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-2.9677
chr17	88045636	88045672	protein_coding	Epcam	exon	ENSMUSG00000045394	ProperStrand	43	chr19	8799359	8799403	snoRNA	ENSMUSG00000065280_SNORD28	.	ENSMUSG00000065280	ProperStrand	269	1	-10.9772
chr5	121655033	121655123	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	chr2	37255577	37255613	snoRNA	ENSMUSG00000077756_Snord90	.	ENSMUSG00000077756	ProperStrand	167	2	-3.5457
chr17	11718521	11718539	protein_coding	Park2	intron	ENSMUSG00000023826	NonProperStrand	26	chrX	7499539	7499558	protein_coding	Pcsk1n	exon	ENSMUSG00000039278	NonProperStrand	3	1	-inf
chr16	56375300	56375317	SINE	B1_Mur2	Alu	chr16B1_Mur256375253	NonProperStrand	2	chr5	108334195	108334249	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	2	-inf
chr16	23111374	23111466	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	chr9	40612110	40612152	snoRNA	ENSMUSG00000075924_Snord14d	.	ENSMUSG00000075924	ProperStrand	131	2	-0.9051
chr12	68766699	68766789	LINE	L1_Mus2	L1	chr12L1_Mus268766146	ProperStrand	12	chr4	79941956	79942046	LINE	L1Md_F2	L1	chr4L1Md_F279939992	ProperStrand	1	1	-inf
chr6	136768868	136768960	protein_coding-noncoding	Wbp11	utr3	ENSMUSG00000030216	ProperStrand	1	chr6	136769028	136769108	protein_coding	Wbp11	exon	ENSMUSG00000030216	ProperStrand	87	1	-inf
chr9	107483042	107483132	protein_coding	Nat6	utr5	ENSMUSG00000079334	ProperStrand	5	chr9	15119666	15119746	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-12.4515
chr11	60369520	60369568	protein_coding	Alkbh5	utr3	ENSMUSG00000042650	ProperStrand	203	chr8	73419685	73419775	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-3.6150
chr11	55215469	55215494	protein_coding	Sparc	exon	ENSMUSG00000018593	ProperStrand	48	chr2	53003875	53003891	protein_coding	Prpf40a	exon	ENSMUSG00000061136	ProperStrand	129	1	-12.2268
chr5	74931651	74931674	protein_coding	Fip1l1	utr5	ENSMUSG00000029227	ProperStrand	102	chr13	23830802	23830818	protein_coding	Hist1h1c	exon	ENSMUSG00000036181	NonProperStrand	6	1	-16.9302
chr7	116663721	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	chr3	96528191	96528291	snoRNA	ENSMUSG00000065669_SNORA5	.	ENSMUSG00000065669	ProperStrand	180	6	-7.3956
chr9	121823892	121823908	protein_coding	Cyp8b1	exon	ENSMUSG00000050445	NonProperStrand	101	chr4	131908355	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-1.5546
chr15	76521054	76521134	protein_coding	Ppp1r16a	utr5	ENSMUSG00000033819	ProperStrand	122	chr11	119978250	119989741	protein_coding	Slc38a10	exon	ENSMUSG00000061306	ProperStrand	91	1	-11.0511
chr7	106755098	106755198	protein_coding	Arrb1	utr3	ENSMUSG00000018909	ProperStrand	46	chr2	32781399	32781415	protein_coding	Lrsam1	utr3	ENSMUSG00000026792	ProperStrand	80	1	-13.2721
chr19	12793320	12793339	protein_coding	Keg1	exon	ENSMUSG00000024694	ProperStrand	7	chr9	15119632	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-11.2102
chr1	138841540	138841640	protein_coding	Nr5a2	exon	ENSMUSG00000026398	ProperStrand	43	chr15	5068446	5068480	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	5	-inf
chr8	122364297	122364314	protein_coding	Cotl1	utr5	ENSMUSG00000031827	NonProperStrand	5	chr2	144087414	144087449	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-11.6878
chr10	127428422	127428438	protein_coding	Hsd17b6	exon	ENSMUSG00000025396	NonProperStrand	68	chr1	58561147	58561174	protein_coding	Orc2	intron	ENSMUSG00000026037	ProperStrand	20	1	-15.2797
chr1	40053934	40053951	protein_coding	Map4k4	exon	ENSMUSG00000026074	ProperStrand	348	chr14	76247711	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-2.3281
chr15	5067322	5067621	protein_coding	Rpl37	exon	ENSMUSG00000041841	ProperStrand	69	chr9	15118332	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	3	-8.1077
chr15	9079263	9081294	protein_coding	Lmbrd2	exon	ENSMUSG00000039704	ProperStrand	8	chr1	162966834	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-10.3686
chr8	119481619	119481660	protein_coding	Atmin	exon	ENSMUSG00000047388	ProperStrand	26	chr2	32818838	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	3	-16.1972
chr4	132530099	132530116	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	chr12	106269284	106269384	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-1.0638
chr1	63225254	63225312	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	chr18	35102298	35102333	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-2.3935
chr12	56741617	56743320	protein_coding	Ralgapa1	exon	ENSMUSG00000021027	ProperStrand	9	chr17	24857747	24857827	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-5.8950
chr14	51427308	51427399	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr11	74470797	74470833	protein_coding	1300001I01Rik	exon	ENSMUSG00000020741	ProperStrand	76	5	-20.6063
chr17	66468411	66468427	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	chr11	6520321	6520421	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	1	-4.3447
chr4	43505827	43505907	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr5	24080054	24080144	protein_coding	Abcf2	exon	ENSMUSG00000028953	ProperStrand	50	1	-3.4012
chr3	88740119	88746698	protein_coding	Dap3	exon	ENSMUSG00000068921	ProperStrand	58	chr18	35102299	35102337	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	4	-19.4181
chr2	105814082	105814162	protein_coding-noncoding	Dnajc24	utr3	ENSMUSG00000027166	NonProperStrand	1	chr2	105814258	105814348	protein_coding	Dnajc24	intron	ENSMUSG00000027166	NonProperStrand	1	1	-inf
chr3	122852344	122852434	protein_coding	Synpo2	intron	ENSMUSG00000050315	ProperStrand	2	chr6	33979664	33979744	protein_coding	Lrguk	exon	ENSMUSG00000056215	ProperStrand	6	1	-inf
chr7	113825819	113825909	LINE	Lx8	L1	chr7Lx8113825788	ProperStrand	1	chr13	76530419	76530509	protein_coding	Mctp1	intron	ENSMUSG00000021596	NonProperStrand	13	1	-inf
chr2	76690968	76691221	protein_coding	Ttn	exon	ENSMUSG00000051747	NonProperStrand	27	chr7	133991456	133991472	protein_coding	Doc2a	utr5	ENSMUSG00000052301	NonProperStrand	4	1	-inf
chr12	29318661	29319086	protein_coding	Rps7	exon	ENSMUSG00000061477	ProperStrand	129	chr1	72272877	72272967	snRNA	ENSMUSG00000075752_U2	.	ENSMUSG00000075752	ProperStrand	535	1	-7.4067
chr17	75790277	75790293	protein_coding	Ltbp1	utr3	ENSMUSG00000001870	NonProperStrand	66	chr12	17552948	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-4.9047
chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	chr7	51505506	51505591	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	1	-4.7454
chr6	125121042	125121426	protein_coding	Ncapd2	exon	ENSMUSG00000038252	ProperStrand	170	chr11	68887040	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-2.2765
chrX	20257910	20257927	protein_coding	Uba1	exon	ENSMUSG00000001924	ProperStrand	156	chr1	102076757	102076790	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	1	-7.5276
chr7	117189866	117189956	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	chr3	85942718	85942780	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	3	-2.2504
chr10	18393547	18393563	protein_coding	D10Bwg1379e	intron	ENSMUSG00000019852	NonProperStrand	120	chr14	55214010	55214095	protein_coding	4931414P19Rik	exon	ENSMUSG00000022179	NonProperStrand	3	1	-18.3558
chr4	131908302	131908899	lincRNA	Gm17300	exon	ENSMUSG00000091021	ProperStrand	109	chr16	23111720	23111815	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	NonProperStrand	47	3	-inf
chr4	43505667	43505720	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr18	38760005	38760022	protein_coding	Spry4	intron	ENSMUSG00000024427	NonProperStrand	3	1	-9.2362
chr11	80245254	80285940	protein_coding	Psmd11	utr3	ENSMUSG00000017428	ProperStrand	34	chr16	23110829	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	7	-9.7871
chr11	5430944	5430962	protein_coding	Ccdc117	utr3	ENSMUSG00000020482	NonProperStrand	20	chr5	130300419	130300477	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.5361
chr10	80642133	80642191	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr5	147646460	147646480	snoRNA	ENSMUSG00000077185_SNORD102	.	ENSMUSG00000077185	ProperStrand	142	1	-4.4286
chr17	35954848	35954928	SINE	RSINE1	B4	chr17RSINE135954847	NonProperStrand	1	chr7	26694065	26694155	protein_coding	Cyp2b10	intron	ENSMUSG00000030483	ProperStrand	2	1	-inf
chr9	64026206	64026296	protein_coding	Rpl4	utr3	ENSMUSG00000032399	ProperStrand	608	chr4	131865379	131865459	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	4	-2.8055
chr5	139717236	139717327	protein_coding	Sun1	exon	ENSMUSG00000036817	ProperStrand	108	chr6	72738580	72738596	protein_coding	Tcf7l1	exon	ENSMUSG00000055799	NonProperStrand	8	1	-16.2304
chr2	165818154	165818171	protein_coding	Ncoa3	utr5	ENSMUSG00000027678	NonProperStrand	10	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-6.7807
chr12	88778628	88778768	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	chr3	123210854	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	20	-1.0911
chr4	116826700	116826749	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	chr19	8799581	8799622	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	2	-1.9479
chr11	14961829	14961849	LINE	Lx	L1	chr11Lx14961726	ProperStrand	93	chr9	15119268	15119296	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	1	-8.8288
chr17	30528407	30528428	protein_coding	Btbd9	intron	ENSMUSG00000062202	NonProperStrand	9	chr11	69483136	69483236	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-6.0733
chr14	55512976	55513012	protein_coding	Pabpn1	utr5	ENSMUSG00000022194	ProperStrand	22	chr11	6428083	6428156	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.0956
chr15	93090616	93090706	protein_coding	Gxylt1	intron	ENSMUSG00000036197	ProperStrand	12	chr14	65372754	65372834	snoRNA	ENSMUSG00000064442_SNORA36	.	ENSMUSG00000064442	ProperStrand	296	1	-13.3967
chr17	35299510	35299610	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	NonProperStrand	14	chr18	35716829	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	NonProperStrand	45	1	-16.9247
chr2	38280204	38280224	lincRNA	Gm13589	intron	ENSMUSG00000085950	NonProperStrand	31	chr2	79843543	79843559	protein_coding	Pde1a	intron	ENSMUSG00000059173	NonProperStrand	275	1	-11.5957
chr12	59155012	59155092	LINE	L1_Mm	L1	chr12L1_Mm59154957	NonProperStrand	1	chr12	59154793	59154883	LINE	L1_Mus1	L1	chr12L1_Mus159154579	ProperStrand	1	1	-inf
chr11	97699010	97699043	protein_coding	Lasp1	utr3	ENSMUSG00000038366	ProperStrand	65	chr5	121655063	121655153	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.5991
chr4	106164708	106164724	protein_coding	Bsnd	utr5	ENSMUSG00000025418	ProperStrand	22	chr9	53312082	53312149	protein_coding	Atm	exon	ENSMUSG00000034218	ProperStrand	17	1	-18.1142
chr5	73695915	73697827	protein_coding	Ociad1	exon	ENSMUSG00000029152	ProperStrand	51	chr16	23110453	23110526	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.7428
chr5	136259229	136259289	protein_coding	Mdh2	exon	ENSMUSG00000019179	ProperStrand	50	chr4	132394419	132394462	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	3	-inf
chr15	20083400	20083418	LINE	Lx	L1	chr15Lx20083212	NonProperStrand	14	chr7	116663646	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	4	-16.7487
chr2	147011593	147011610	protein_coding	Nkx2-2	exon	ENSMUSG00000027434	ProperStrand	47	chr7	116664819	116664924	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-7.6425
chr15	97685556	97685572	protein_coding	Vdr	utr3	ENSMUSG00000022479	ProperStrand	14	chr5	121655021	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	4	-inf
chr2	26494708	26494794	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	chr1	59748784	59748812	snoRNA	ENSMUSG00000077345_Snord70	.	ENSMUSG00000077345	ProperStrand	61	1	-3.0773
chr7	4744930	4744979	protein_coding	Rpl28	exon	ENSMUSG00000030432	ProperStrand	220	chr9	120038580	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.0055
chr3	95463007	95463097	protein_coding	Mcl1	exon	ENSMUSG00000038612	ProperStrand	75	chr10	23505170	23505250	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-1.8898
chr4	155135071	155135111	protein_coding	Atad3a	exon	ENSMUSG00000029036	ProperStrand	28	chr2	32818803	32818882	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-6.9808
chr9	115159955	115185920	protein_coding	Stt3b	exon	ENSMUSG00000032437	ProperStrand	66	chr10	23505152	23505279	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-6.7357
chrX	7701929	7701991	protein_coding	Wdr13	utr3	ENSMUSG00000031166	ProperStrand	8	chr11	69483190	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-6.3191
chr6	87769189	87769558	protein_coding	Isy1	exon	ENSMUSG00000030056	ProperStrand	172	chr11	6428087	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.4529
chr1	187238337	187239642	protein_coding	Eprs	exon	ENSMUSG00000026615	ProperStrand	149	chr2	165683392	165683445	protein_coding	Zmynd8	intron	ENSMUSG00000039671	ProperStrand	81	1	-10.8845
chr2	79843543	79843559	protein_coding	Pde1a	intron	ENSMUSG00000059173	NonProperStrand	275	chr11	77996560	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-3.1969
chr4	43505657	43505813	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr15	25709495	25721827	protein_coding	Myo10	exon	ENSMUSG00000022272	ProperStrand	168	4	-5.8238
chr5	144477447	144477649	protein_coding	Usp42	exon	ENSMUSG00000051306	ProperStrand	17	chr12	17553055	17553092	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-7.6001
chr5	20049432	20056028	protein_coding	Magi2	exon	ENSMUSG00000040003	NonProperStrand	24	chr10	39978411	39978485	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-7.2796
chr15	81782413	81788287	protein_coding	Pmm1	exon	ENSMUSG00000022474	ProperStrand	24	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-5.9609
chr14	31373000	31373773	protein_coding	Tkt	exon	ENSMUSG00000021957	ProperStrand	160	chr14	71295884	71301302	protein_coding	Gfra2	exon	ENSMUSG00000022103	ProperStrand	26	1	-13.0367
chr1	157627013	157627033	protein_coding	Qsox1	exon	ENSMUSG00000033684	ProperStrand	11	chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	1	-12.6504
chr10	40085902	40085963	protein_coding	Cdk19	intron	ENSMUSG00000038481	ProperStrand	34	chr10	110918555	110918645	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-7.5360
chr12	56954123	56954172	protein_coding	Brms1l	intron	ENSMUSG00000012076	ProperStrand	9	chr19	8800386	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-7.2762
chr4	133801679	133801695	lincRNA	E130218I03Rik	exon	ENSMUSG00000086322	NonProperStrand	43	chr7	134343900	134346708	protein_coding	Tbc1d10b	exon	ENSMUSG00000042492	ProperStrand	187	1	-11.7056
chr11	24067716	24067733	protein_coding	Bcl11a	utr3	ENSMUSG00000000861	ProperStrand	30	chr8	73419725	73419775	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.4253
chr5	115848210	115848227	antisense	Gm13832	.	ENSMUSG00000087292	ProperStrand	47	chr17	13112489	13112527	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-5.0512
chr10	80640593	80640809	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr14	31827478	31827511	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	2	-1.4374
chr17	31761975	31761991	protein_coding	Cbs	exon	ENSMUSG00000024039	ProperStrand	12	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-8.4427
chr6	87859788	87860048	protein_coding	Copg	exon	ENSMUSG00000030058	ProperStrand	68	chr16	23111374	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.0916
chr7	134018730	134018820	protein_coding	Taok2	intron	ENSMUSG00000059981	ProperStrand	47	chr11	69483193	69483273	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.8745
chr17	28352746	28352765	protein_coding	Def6	intron	ENSMUSG00000002257	NonProperStrand	2	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-8.7800
chr10	19886574	19886591	protein_coding	Mtap7	intron	ENSMUSG00000019996	NonProperStrand	16	chr9	75245549	75245568	protein_coding	Mapk6	exon	ENSMUSG00000042688	ProperStrand	25	1	-17.5947
chr1	191472728	191472828	protein_coding	Cenpf	exon	ENSMUSG00000026605	ProperStrand	44	chr11	97642952	97643006	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.0151
chr11	60016944	60016988	protein_coding	Srebf1	exon	ENSMUSG00000020538	ProperStrand	24	chr9	15119719	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.3157
chrX	106290968	106345261	protein_coding	Sh3bgrl	exon	ENSMUSG00000031246	ProperStrand	9	chr17	24857804	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-5.8950
chr4	40937865	40938844	protein_coding	Nfx1	exon	ENSMUSG00000028423	ProperStrand	39	chr5	130295523	130295552	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-6.0944
chr5	139470823	139470913	protein_coding	Pdgfa	utr5	ENSMUSG00000025856	ProperStrand	3	chr4	131865857	131865937	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.6896
chr10	119286688	119286704	protein_coding	Grip1	intron	ENSMUSG00000034813	ProperStrand	38	chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	1	-10.1077
chr13	68759738	68764669	protein_coding	Adcy2	exon	ENSMUSG00000021536	ProperStrand	237	chr1	94756555	94756582	protein_coding	Gpc1	utr3	ENSMUSG00000034220	ProperStrand	30	1	-11.9599
chr5	145638449	145638549	protein_coding	Smurf1	utr3	ENSMUSG00000038780	ProperStrand	45	chr9	64024528	64024569	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	18	-19.4720
chrX	70246779	70276763	protein_coding	Zfp185	utr3	ENSMUSG00000031351	ProperStrand	13	chr10	23505152	23505282	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	7	-inf
chr9	26440743	26440759	DNA	MER5A	MER1_type	chr9MER5A26440741	ProperStrand	108	chr11	50079865	50079882	protein_coding	Maml1	exon	ENSMUSG00000050567	ProperStrand	29	1	-13.6046
chr18	7446127	7446190	protein_coding	Mpp7	intron	ENSMUSG00000057440	ProperStrand	7	chr11	97643000	97643090	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-6.6269
chr16	78250022	78250045	Simple_repeat	(TCCCG)n	Simple_repeat	chr16(TCCCG)n78250013	NonProperStrand	6	chr7	116664807	116664924	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	4	-19.4535
chr6	125144180	125144216	protein_coding	Mrpl51	utr3	ENSMUSG00000030335	NonProperStrand	2	chr4	116827121	116827182	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	2	-inf
chr9	62641775	62641875	protein_coding	Fem1b	utr3	ENSMUSG00000032244	ProperStrand	111	chr4	132102598	132106342	protein_coding	Dnajc8	exon	ENSMUSG00000054405	ProperStrand	22	1	-14.1112
chr4	11190888	11190953	protein_coding	Dpy19l4	utr3	ENSMUSG00000045205	ProperStrand	13	chr11	62416952	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	7	-22.3414
chr9	63869769	63869786	protein_coding	Smad6	utr5	ENSMUSG00000036867	NonProperStrand	637	chr1	63225659	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	2	-4.0009
chr10	75322525	75322562	protein_coding	Mif	exon	ENSMUSG00000033307	ProperStrand	146	chr10	6450631	6450649	protein_coding	Plekhg1	intron	ENSMUSG00000040624	NonProperStrand	75	1	-11.0798
chr1	173338047	173338077	protein_coding	Arhgap30	exon	ENSMUSG00000048865	ProperStrand	6	chr11	6428060	6428098	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-12.7157
chr5	115940329	115940406	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	chr18	35714145	35714235	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	15	-17.2173
chr8	108233712	108233729	protein_coding	4933405L10Rik	exon	ENSMUSG00000013158	ProperStrand	94	chr17	56753010	56753036	protein_coding	Rpl36	exon	ENSMUSG00000057863	ProperStrand	62	1	-12.3457
chr13	9833553	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr7	52171791	52184650	protein_coding	Ap2a1	exon	ENSMUSG00000060279	ProperStrand	193	1	-2.7863
chr5	77390435	77390471	protein_coding	Paics	exon	ENSMUSG00000029247	ProperStrand	78	chr19	38146471	38146534	snoRNA	ENSMUSG00000064646_SNORA42	.	ENSMUSG00000064646	ProperStrand	37	2	-21.2194
chr3	75356209	75356299	protein_coding	Pdcd10	intron	ENSMUSG00000027835	ProperStrand	10	chr16	23110867	23110947	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	8	-19.7104
chr13	9833551	9833618	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr1	62863699	62863715	protein_coding	Nrp2	utr3	ENSMUSG00000025969	ProperStrand	35	1	-6.0102
chr9	35024339	35024429	protein_coding	Srpr	utr3	ENSMUSG00000032042	ProperStrand	54	chr17	13112491	13112571	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-4.7824
chr17	28726785	28726826	protein_coding	Srpk1	utr3	ENSMUSG00000004865	ProperStrand	61	chr2	26768392	26768433	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	2	-9.1086
chr14	66174230	66174265	protein_coding	Elp3	intron	ENSMUSG00000022031	ProperStrand	71	chr16	23111385	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	6	-8.2721
chr4	122971908	122971998	protein_coding	Pabpc4	exon	ENSMUSG00000011257	ProperStrand	85	chr5	108334190	108334270	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-4.1550
chr6	56818821	56823368	protein_coding	Fkbp9	exon	ENSMUSG00000029781	ProperStrand	39	chr3	68889050	68889140	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-4.0569
chr11	98034595	98041340	protein_coding	Med1	exon	ENSMUSG00000018160	ProperStrand	23	chr11	87895146	87895164	protein_coding	Vezf1	exon	ENSMUSG00000018377	NonProperStrand	17	2	-19.5400
chr2	34560870	34560889	protein_coding	Gapvd1	intron	ENSMUSG00000026867	NonProperStrand	3	chr1	162968450	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-12.4165
chr2	73746723	73746742	protein_coding	Atp5g3	exon	ENSMUSG00000018770	ProperStrand	41	chr5	92485086	92485183	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	1	-9.5049
chr7	87243679	87243759	protein_coding	Idh2	exon	ENSMUSG00000030541	ProperStrand	21	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.1775
chr14	76247751	76247842	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	chrX	143918883	143918963	snoRNA	ENSMUSG00000084421_SNORA35	.	ENSMUSG00000084421	ProperStrand	293	1	-1.4513
chr19	32586446	32586475	protein_coding	Minpp1	intron	ENSMUSG00000024896	ProperStrand	23	chr4	131865855	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.4190
chr17	67712818	67712835	LTR	ORR1E	MaLR	chr17ORR1E67712788	ProperStrand	39	chr18	3046577	3046673	LTR	IAPLTR4	ERVK	chr18IAPLTR43046506	ProperStrand	1	1	-inf
chr11	113523870	113523887	protein_coding	Cog1	utr3	ENSMUSG00000018661	ProperStrand	51	chr18	33954823	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	8	-inf
chr4	43505657	43505718	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr11	57459134	57459216	protein_coding	Galnt10	exon	ENSMUSG00000020520	ProperStrand	4	1	-8.5468
chr8	47039034	47039051	protein_coding	1700029J07Rik	utr3	ENSMUSG00000071103	ProperStrand	2	chr1	162966813	162966871	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-13.6983
chr13	34021903	34021999	protein_coding	Serpinb6a	exon	ENSMUSG00000060147	ProperStrand	24	chr1	88252837	88252864	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	3	-19.2366
chr9	102168558	102168575	protein_coding	Ephb1	intron	ENSMUSG00000032537	NonProperStrand	9	chr7	87496641	87496673	protein_coding	Man2a2	utr3	ENSMUSG00000038886	ProperStrand	18	1	-18.6028
chr12	60171208	60171379	protein_coding	Pnn	exon	ENSMUSG00000020994	ProperStrand	42	chr19	8963096	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.8907
chr10	80809668	80809684	protein_coding	Hmg20b	exon	ENSMUSG00000020232	ProperStrand	157	chr10	126434527	126434574	protein_coding	Ctdsp2	utr3	ENSMUSG00000078429	ProperStrand	74	1	-10.9613
chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr15	58577335	58577351	protein_coding	Fer1l6	intron	ENSMUSG00000037106	ProperStrand	54	1	-6.6630
chr9	25059948	25059964	protein_coding	Sept7	intron	ENSMUSG00000001833	ProperStrand	101	chr8	13416895	13416912	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-5.4319
chr4	139295481	139295497	protein_coding	Pax7	utr3	ENSMUSG00000028736	ProperStrand	23	chr10	30530958	30531020	tRNA	tRNA81-GluCTC	.	1843669	ProperStrand	154	1	-13.3638
chr11	6519810	6519880	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	chr9	64022885	64022910	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	3	-7.3412
chr11	106916322	106916344	protein_coding	Bptf	exon	ENSMUSG00000040481	ProperStrand	70	chr4	131908236	131908287	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.2038
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr4	5690428	5690446	protein_coding	Fam110b	intron	ENSMUSG00000049119	NonProperStrand	15	1	-13.2508
chr13	23830722	23830778	protein_coding	Hist1h1c	exon	ENSMUSG00000036181	ProperStrand	99	chr15	5068441	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-5.0890
chr9	78023187	78023247	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr2	79843543	79843559	protein_coding	Pde1a	intron	ENSMUSG00000059173	NonProperStrand	275	1	-3.0013
chr17	35281630	35281907	protein_coding	Bag6	exon	ENSMUSG00000024392	ProperStrand	181	chr11	48616641	48616706	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	1	-7.1447
chrX	113862541	113862576	LINE	L1VL4	L1	chrXL1VL4113861390	ProperStrand	23	chr11	6428054	6428169	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	10	-19.9618
chr4	106925977	106926004	protein_coding	Lrrc42	utr5	ENSMUSG00000028617	ProperStrand	28	chr10	105010980	105010997	protein_coding	Tmtc2	utr5	ENSMUSG00000036019	ProperStrand	72	1	-14.4865
chr1	24621542	24621567	protein_coding	Gm10925	utr5	ENSMUSG00000090378	ProperStrand	320	chr18	35714144	35714262	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-0.8254
chr7	31888561	31888577	protein_coding	Hpn	exon	ENSMUSG00000001249	NonProperStrand	20	chr10	79879959	79880062	protein_coding	Tcf3	exon	ENSMUSG00000020167	NonProperStrand	24	1	-17.2559
chr13	99083691	99086202	protein_coding	Btf3	exon	ENSMUSG00000021660	ProperStrand	64	chr10	61329160	61330213	protein_coding	Col13a1	exon	ENSMUSG00000058806	ProperStrand	120	1	-11.7915
chr2	90235297	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chrX	19868661	19868677	protein_coding	Slc9a7	exon	ENSMUSG00000037341	ProperStrand	17	1	-6.9523
chr7	130143109	130143183	protein_coding	Rbbp6	exon	ENSMUSG00000030779	ProperStrand	46	chr16	23111697	23111755	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	5	-11.1965
chr7	28443911	28443927	protein_coding	Map3k10	exon	ENSMUSG00000040390	NonProperStrand	21	chr4	131865855	131865910	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.5891
chr11	72255201	72255917	protein_coding	Mybbp1a	exon	ENSMUSG00000040463	ProperStrand	279	chr15	79908934	79909009	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-2.6123
chr8	38049667	38049683	LTR	MLT1A0	MaLR	chr8MLT1A038049422	NonProperStrand	91	mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	1	-5.0909
chr7	151765212	151765228	antisense	Gm10574	.	ENSMUSG00000073778	ProperStrand	357	chr4	116826699	116826769	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-3.3594
chr18	36700414	36700431	protein_coding	Slc4a9	exon	ENSMUSG00000024485	ProperStrand	13	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-6.9302
chr8	87407479	87409845	protein_coding	Syce2	exon	ENSMUSG00000003824	NonProperStrand	1	chr6	124665420	124665520	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	1	-inf
chr2	28324355	28324372	protein_coding	Mrps2	exon	ENSMUSG00000035772	NonProperStrand	47	chr4	131908380	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.7849
chr11	62416572	62416599	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr5	108334195	108334335	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	6	-8.4719
chrX	166133708	166133764	snoRNA	ENSMUSG00000065716_SNORA51	.	ENSMUSG00000065716	ProperStrand	1	chr17	24857717	24857807	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-inf
chr11	84090083	84091309	protein_coding	Acaca	exon	ENSMUSG00000020532	ProperStrand	100	chr9	44918660	44918676	protein_coding	Gm10684	utr5	ENSMUSG00000074385	ProperStrand	17	1	-14.8623
chr4	138927648	138927685	protein_coding	C230096C10Rik	exon	ENSMUSG00000078517	ProperStrand	69	chr16	18240811	18240911	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	1	-8.8451
chr1	16523859	16523939	LTR	RMER13A	ERVK	chr1RMER13A16523716	ProperStrand	1	chr13	113631428	113631518	protein_coding	Ppap2a	intron	ENSMUSG00000021759	NonProperStrand	1	1	-inf
chr2	113365766	113365856	protein_coding	Fmn1	exon	ENSMUSG00000044042	ProperStrand	17	chr15	98350173	98350253	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-7.2611
chr13	68212289	68212379	LTR	IAPEY2_LTR	ERVK	chr13IAPEY2_LTR68212113	NonProperStrand	1	chr13	68211988	68212068	LTR	IAPEy-int	ERVK	chr13IAPEy-int68211696	NonProperStrand	1	1	-inf
chr10	127947624	127947641	protein_coding	Esyt1	utr3	ENSMUSG00000025366	NonProperStrand	32	chr17	35299503	35299559	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-6.0072
chr7	112784852	112784964	protein_coding	Arfip2	intron	ENSMUSG00000030881	NonProperStrand	2	chr16	23110987	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr11	87396047	87396137	protein_coding	Sept4	intron	ENSMUSG00000020486	ProperStrand	2	chr14	8763427	8763615	protein_coding	Flnb	exon	ENSMUSG00000025278	ProperStrand	124	1	-20.8924
chr10	23505559	23505627	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	chr17	24856663	24856737	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	5	-7.2105
chr11	84186125	84186151	protein_coding	Acaca	exon	ENSMUSG00000020532	ProperStrand	100	chr8	35979852	35979970	protein_coding	Tnks	intron	ENSMUSG00000031529	ProperStrand	37	1	-13.2634
chr10	12446137	12447618	protein_coding	Utrn	exon	ENSMUSG00000019820	ProperStrand	69	chr11	106362348	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-5.5685
chr7	20283597	20284372	protein_coding	Apoe	utr5	ENSMUSG00000002985	ProperStrand	231	chr10	23505152	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-1.4505
chr5	76641696	76641769	protein_coding	Clock	utr3	ENSMUSG00000029238	ProperStrand	16	chr10	80641710	80641775	protein_coding	Eef2	intron	ENSMUSG00000034994	ProperStrand	2244	1	-8.7566
chr9	103247225	103247284	protein_coding	Topbp1	exon	ENSMUSG00000032555	ProperStrand	81	chr10	23505152	23505229	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-0.8528
chr19	5655699	5655715	protein_coding	Sipa1	exon	ENSMUSG00000056917	NonProperStrand	6	chr6	125073405	125073431	protein_coding	Chd4	exon	ENSMUSG00000063870	ProperStrand	303	1	-14.8129
chr4	43505656	43505745	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr16	43886792	43886929	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	12	-6.7711
chr16	11074197	11074239	protein_coding	Snn	utr3	ENSMUSG00000037972	ProperStrand	6	chr4	131908686	131908808	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-18.2013
chr2	90235286	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	118219574	118219706	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	17	-0.9642
chr9	44143185	44143265	protein_coding	H2afx	exon	ENSMUSG00000049932	ProperStrand	137	chr11	77996557	77996619	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-4.4900
chr13	113659232	113659312	protein_coding	Skiv2l2	exon	ENSMUSG00000016018	ProperStrand	55	chr8	73419656	73419748	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	29	-19.6925
chr6	31488057	31488073	protein_coding	Podxl	intron	ENSMUSG00000025608	ProperStrand	37	chr17	27693943	27694000	protein_coding	Hmga1	utr5	ENSMUSG00000046711	ProperStrand	180	1	-12.0853
chr10	60887357	60887400	protein_coding	Nodal	utr3	ENSMUSG00000037171	ProperStrand	30	chr2	166890523	166890562	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-8.9499
chr5	54389950	54389967	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	chr4	137212294	137212310	protein_coding	Usp48	utr3	ENSMUSG00000043411	ProperStrand	135	1	-9.1560
chr11	74537781	74537798	protein_coding	Pafah1b1	utr5	ENSMUSG00000020745	ProperStrand	20	chr8	106976637	106976653	protein_coding	Ccdc79	exon	ENSMUSG00000052616	NonProperStrand	57	1	-15.6257
chr15	88969728	88969776	protein_coding	Mapk12	intron	ENSMUSG00000022610	ProperStrand	8	chr10	23505190	23505282	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	7	-19.3140
chr2	98070567	98070587	LINE	L1Md_F3	L1	chr2L1Md_F398069504	NonProperStrand	1	chr7	134896003	134904806	protein_coding	Fbxl19	exon	ENSMUSG00000030811	ProperStrand	15	1	-inf
chr17	39985197	39985277	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr7	16524110	16524200	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	1	-2.5751
chr2	109739790	109739841	protein_coding	Lin7c	utr3	ENSMUSG00000027162	ProperStrand	15	chr2	179678005	179678067	protein_coding	Taf4a	intron	ENSMUSG00000039117	ProperStrand	15	1	-19.0472
chr9	65044377	65044467	snRNA	ENSMUSG00000075763_U5	.	ENSMUSG00000075763	ProperStrand	216	chr11	6428043	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	4	-5.0523
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-1.9386
chr11	45763804	45763885	protein_coding	Thg1l	intron	ENSMUSG00000011254	ProperStrand	19	chr16	23110969	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-5.0037
chr8	91045231	91045250	Low_complexity	GC_rich	Low_complexity	chr8GC_rich91045207	NonProperStrand	1	chr9	15119631	15119693	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-inf
chr3	90197173	90197671	protein_coding	Ints3	exon	ENSMUSG00000027933	ProperStrand	87	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-5.1175
chr14	51427120	51427220	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr10	21062333	21064923	protein_coding	Hbs1l	exon	ENSMUSG00000019977	ProperStrand	27	1	-8.8128
chr8	73223377	73223393	protein_coding	Jund	exon	ENSMUSG00000071076	ProperStrand	50	chr1	162965531	162965571	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.6110
chr9	79951550	79959128	protein_coding	Senp6	exon	ENSMUSG00000034252	ProperStrand	110	chr9	15118326	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-2.3948
chr2	25201064	25201112	protein_coding	Man1b1	exon	ENSMUSG00000036646	ProperStrand	57	chr4	57455800	57455817	protein_coding	Palm2	intron	ENSMUSG00000090053	ProperStrand	17	1	-15.9510
chr10	20080836	20080859	protein_coding	Fam54a	utr3	ENSMUSG00000019992	ProperStrand	232	chrX	166428168	166428268	protein_coding	Mid1	utr3	ENSMUSG00000035299	ProperStrand	209	1	-8.1053
chr15	99329179	99329195	protein_coding	Faim2	utr3	ENSMUSG00000023011	ProperStrand	45	chr11	69483136	69483205	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-7.5927
chr6	57638553	57638569	protein_coding	Pigy	utr3	ENSMUSG00000043162	NonProperStrand	18	chr11	69481332	69481472	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.5024
chr8	125415573	125415673	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	chr10	110918658	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-1.3530
chr17	55839385	55839401	protein_coding	Pot1b	exon	ENSMUSG00000024174	ProperStrand	5	chr19	44188369	44188466	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	2	-18.7147
chr17	46814084	46814100	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr3	96560441	96560501	protein_coding	Rnf115	intron	ENSMUSG00000028098	ProperStrand	46	1	-9.7651
chr11	71856746	71856763	protein_coding	Fam64a	exon	ENSMUSG00000020808	NonProperStrand	19	chr17	75239698	75239749	protein_coding	Ttc27	exon	ENSMUSG00000024078	ProperStrand	14	1	-19.9947
chr5	115940341	115940406	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	chr9	64024529	64024567	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	1	-3.9032
chr8	59992792	59992831	protein_coding	Hmgb2	exon	ENSMUSG00000054717	ProperStrand	184	chr10	110918582	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	3	-4.5100
chr2	113951690	113952734	protein_coding	Aqr	exon	ENSMUSG00000040383	ProperStrand	70	chr10	23505154	23505236	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	10	-16.9050
chr4	43505767	43505847	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr11	94199733	94199823	protein_coding	Ankrd40	exon	ENSMUSG00000020864	ProperStrand	11	1	-6.3578
chrX	143906103	143906172	protein_coding	Lrch2	utr3	ENSMUSG00000031290	ProperStrand	6	chr13	51743580	51743662	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	3	-19.2301
chr13	69751314	69751818	protein_coding	Nsun2	exon	ENSMUSG00000021595	ProperStrand	110	chr9	22309159	22309176	protein_coding	Bbs9	intron	ENSMUSG00000035919	ProperStrand	51	1	-12.4249
chr8	122436541	122436559	protein_coding	Usp10	intron	ENSMUSG00000031826	NonProperStrand	4	chr11	97642952	97643047	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-7.8635
chr7	29689654	29690280	protein_coding	Actn4	exon	ENSMUSG00000054808	ProperStrand	120	chr17	24857717	24857797	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.2356
chr2	37531371	37531428	protein_coding	Strbp	intron	ENSMUSG00000026915	ProperStrand	90	chr11	69483159	69483249	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.7883
chr5	31363887	31363987	protein_coding	Cad	exon	ENSMUSG00000013629	ProperStrand	260	chr19	8798756	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-2.1466
chr13	25823976	25824066	SINE	B1_Mus1	Alu	chr13B1_Mus125823979	NonProperStrand	1	chr13	25824221	25824301	Simple_repeat	(GAAA)n	Simple_repeat	chr13(GAAA)n25824131	NonProperStrand	1	1	-inf
chr4	137194128	137194156	protein_coding	Usp48	exon	ENSMUSG00000043411	NonProperStrand	10	chr3	68889067	68889167	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	NonProperStrand	26	1	-18.3337
chr18	10052131	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr3	46250662	46250678	protein_coding	Pabpc4l	exon	ENSMUSG00000090919	ProperStrand	137	1	-7.1552
chr9	69860389	69860405	protein_coding	Gtf2a2	utr5	ENSMUSG00000033543	ProperStrand	9	chr11	68886974	68887010	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-7.9318
chr10	79606892	79606908	protein_coding	Atp5d	intron	ENSMUSG00000003072	ProperStrand	44	chr9	120039533	120039576	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.8931
chr18	10052131	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	2	-7.8719
chr7	16534823	16534839	protein_coding	Ehd2	utr3	ENSMUSG00000074364	NonProperStrand	197	chr1	162968213	162968269	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-4.4995
chr13	9093221	9093282	protein_coding	Larp4b	utr5	ENSMUSG00000033499	ProperStrand	53	chr4	122968584	122968661	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-6.5263
chr9	65044378	65044425	snRNA	ENSMUSG00000075763_U5	.	ENSMUSG00000075763	ProperStrand	216	chr7	148634702	148634798	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-3.2209
chr18	36961594	36961661	misc_RNA	Vault	.	ENSMUSG00000065145	ProperStrand	177	chr14	72989685	72989741	protein_coding	Fndc3a	exon	ENSMUSG00000033487	ProperStrand	84	1	-10.4668
chr9	78055615	78055660	protein_coding	Gsta4	exon	ENSMUSG00000032348	ProperStrand	82	chr4	153410349	153410365	protein_coding	Ccdc27	exon	ENSMUSG00000039492	ProperStrand	94	1	-11.7828
chr7	13516166	13516207	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr10	80674669	80675224	protein_coding	Atcay	exon	ENSMUSG00000034958	ProperStrand	94	1	-7.7695
chr2	90235298	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	73051744	73051761	protein_coding	Fkbp8	utr5	ENSMUSG00000019428	ProperStrand	52	1	-4.7373
chr4	123059701	123149511	protein_coding	Macf1	exon	ENSMUSG00000028649	ProperStrand	320	chr18	35716732	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-0.9887
chr6	71832602	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	chr1	145626152	145626192	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-1.5919
chr10	79322681	79322932	protein_coding	Ptbp1	exon	ENSMUSG00000006498	NonProperStrand	2	chr10	79323584	79323664	protein_coding	BC005764	utr3	ENSMUSG00000035835	ProperStrand	3	2	-inf
chr18	33012235	33012561	protein_coding	Wdr36	exon	ENSMUSG00000038299	ProperStrand	28	chr5	54389948	54389966	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	1	-12.3223
chr4	146157666	146157756	protein_coding	Zfp600	intron	ENSMUSG00000066007	ProperStrand	2	chr17	24857731	24857811	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-9.4368
chr6	34254238	34260607	protein_coding	Akr1b3	utr3	ENSMUSG00000001642	ProperStrand	71	chr16	23110841	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-1.0983
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr18	75161108	75161172	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	1	-2.9371
chr13	14711658	14713048	protein_coding	Psma2	exon	ENSMUSG00000015671	ProperStrand	26	chr10	80641890	80641970	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-7.7679
chr13	44965313	44965393	protein_coding	Jarid2	intron	ENSMUSG00000038518	ProperStrand	372	chr17	24857724	24857814	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	NonProperStrand	27	1	-11.2723
chr18	12337659	12337730	protein_coding	3110002H16Rik	exon	ENSMUSG00000024410	ProperStrand	9	chr8	97855770	97855786	protein_coding	Zfp319	utr5	ENSMUSG00000046556	ProperStrand	2	1	-inf
chr7	25259367	25260349	protein_coding	Plaur	exon	ENSMUSG00000046223	ProperStrand	5	chr2	166890556	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-12.7126
chr15	79913288	79913346	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr1	59761635	59761691	snoRNA	ENSMUSG00000089093_Snord11	.	ENSMUSG00000089093	ProperStrand	193	1	-1.6065
chr9	30235085	30235101	protein_coding	Snx19	exon	ENSMUSG00000031993	ProperStrand	353	chr5	130295414	130295486	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-2.0278
chr6	53176437	53176453	LTR	MTE2b	MaLR	chr6MTE2b53176429	ProperStrand	5	chr7	52381341	52381360	protein_coding	Rpl13a	exon	ENSMUSG00000074129	ProperStrand	269	1	-15.4634
chrX	7344568	7344658	protein_coding	Tfe3	exon	ENSMUSG00000000134	ProperStrand	10	chr7	67123693	67123738	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	1	-13.2059
chr6	7798942	7799022	protein_coding	C1galt1	intron	ENSMUSG00000042460	ProperStrand	8	chr13	21845516	21845606	protein_coding	Hist1h2ak	exon	ENSMUSG00000063021	ProperStrand	30	1	-18.5653
chr11	101599557	101599592	protein_coding	Dhx8	exon	ENSMUSG00000034931	ProperStrand	48	chr8	73419696	73419786	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.5376
chr15	99232546	99234879	protein_coding	Tmbim6	exon	ENSMUSG00000023010	ProperStrand	64	chr10	30530963	30531020	tRNA	tRNA81-GluCTC	.	216052	ProperStrand	154	1	-11.2916
chr1	46892139	46892155	protein_coding	Slc39a10	exon	ENSMUSG00000025986	NonProperStrand	2	chr8	13876096	13876172	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-14.6016
chr12	70259659	70259995	protein_coding	Rps29	exon	ENSMUSG00000034892	ProperStrand	124	chr1	9932550	9932610	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-6.2902
chr15	66762248	66762267	protein_coding	Ndrg1	utr3	ENSMUSG00000005125	ProperStrand	35	chr4	96412508	96412526	protein_coding	Gm12695	intron	ENSMUSG00000078639	ProperStrand	110	1	-13.1872
chr18	81183665	81183682	Low_complexity	GC_rich	Low_complexity	chr18GC_rich81183667	ProperStrand	1	chr16	23111372	23111429	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-inf
chr5	145906660	145906687	protein_coding	Bud31	intron	ENSMUSG00000038722	NonProperStrand	6	chr19	8963086	8963173	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-16.0788
chr1	83112937	83113027	Simple_repeat	(GA)n	Simple_repeat	chr1(GA)n83112934	NonProperStrand	2	chr5	108336937	108337017	protein_coding	Rpl5	utr3	ENSMUSG00000058558	ProperStrand	235	2	-inf
chr4	43505826	43505906	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr8	77636562	77638100	protein_coding	Mcm5	exon	ENSMUSG00000005410	ProperStrand	199	1	-1.1570
chr12	71182057	71182076	protein_coding	Nin	intron	ENSMUSG00000021068	ProperStrand	95	chr19	44188492	44188595	snoRNA	ENSMUSG00000077391_SNORA12	.	ENSMUSG00000077391	ProperStrand	506	6	-19.7276
chr4	136389000	136389022	protein_coding	Ephb2	intron	ENSMUSG00000028664	NonProperStrand	9	chr17	46791117	46791426	protein_coding	Cul7	exon	ENSMUSG00000038545	ProperStrand	38	1	-17.7863
chr17	36000485	36000501	protein_coding	Nrm	exon	ENSMUSG00000059791	ProperStrand	253	chr11	55296195	55296258	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-3.4291
chr2	32077505	32082541	protein_coding	Prrc2b	exon	ENSMUSG00000039262	ProperStrand	344	chr9	15119704	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	26	-19.5259
chr17	26792364	26792603	protein_coding	Ergic1	utr3	ENSMUSG00000001576	ProperStrand	114	chr4	131865856	131865982	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.7782
chr7	31360891	31369052	protein_coding	Wbp7	exon	ENSMUSG00000006307	ProperStrand	180	chrX	34622906	34623036	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	3	-4.0759
chr4	135525914	135526377	protein_coding	Lypla2	exon	ENSMUSG00000028670	NonProperStrand	8	chr15	79913301	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-7.5918
chr4	108926996	108927036	protein_coding	Calr4	utr3	ENSMUSG00000028558	ProperStrand	1	chr4	131908687	131908710	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-inf
chr5	30092089	30092131	protein_coding	Dnajb6	exon	ENSMUSG00000029131	ProperStrand	81	chr19	29691145	29692343	protein_coding	Ermp1	exon	ENSMUSG00000046324	ProperStrand	103	1	-11.6246
chr7	112782969	112782985	protein_coding	Arfip2	utr3	ENSMUSG00000030881	ProperStrand	191	chr17	23943932	23944005	protein_coding	Srrm2	exon	ENSMUSG00000039218	ProperStrand	521	1	-6.6827
chr8	110104862	110104883	protein_coding	Psmd7	exon	ENSMUSG00000039067	ProperStrand	36	chr7	20310054	20310070	protein_coding	Pvrl2	exon	ENSMUSG00000062300	ProperStrand	110	1	-13.1294
chr17	27559700	27559717	protein_coding	Grm4	utr3	ENSMUSG00000063239	ProperStrand	147	chr16	23111739	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-0.6947
chr4	140864369	140864459	protein_coding	Epha2	exon	ENSMUSG00000006445	ProperStrand	148	chr17	35299519	35299599	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-3.0926
chr4	118951697	118951729	protein_coding	Ybx1	exon	ENSMUSG00000028639	ProperStrand	171	chr7	117189863	117189931	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	3	-10.0854
chr6	113241276	113241292	protein_coding	Cpne9	intron	ENSMUSG00000030270	ProperStrand	3	chr5	112865459	112865475	protein_coding	Sez6l	exon	ENSMUSG00000058153	ProperStrand	81	1	-19.0673
chr7	52958453	52958469	protein_coding	Car11	exon	ENSMUSG00000003273	NonProperStrand	250	chr8	74059721	74060305	protein_coding	Bst2	exon	ENSMUSG00000046718	ProperStrand	15	1	-13.2726
chr6	131330335	131330415	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	ProperStrand	408	chr7	134671429	134671519	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-4.1312
chr19	42264043	42264912	protein_coding	Zfyve27	exon	ENSMUSG00000018820	ProperStrand	23	chr4	131908814	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.7500
chr1	62684658	62684675	protein_coding	Pard3b	utr3	ENSMUSG00000052062	ProperStrand	11	chr2	91436228	91436299	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-10.9504
chr3	58380662	58380733	protein_coding	2810407C02Rik	exon	ENSMUSG00000075700	ProperStrand	8	chr5	130295419	130295451	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-9.3334
chr3	151900671	151900713	protein_coding	Nexn	exon	ENSMUSG00000039103	NonProperStrand	5	chr16	23110828	23110872	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	chr6	97112810	97112855	snoRNA	ENSMUSG00000065728_SNORA36	.	ENSMUSG00000065728	ProperStrand	158	3	-9.6697
chr1	89105750	89105766	protein_coding	Chrng	exon	ENSMUSG00000026253	NonProperStrand	130	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.7335
chr11	96146302	96146320	protein_coding	Hoxb7	utr5	ENSMUSG00000038721	NonProperStrand	7	chr7	116663671	116663748	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-6.6732
chr5	149113021	149113038	protein_coding	Mtus2	exon	ENSMUSG00000029651	ProperStrand	114	chr2	144087414	144087463	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-5.2866
chr6	91004676	91004692	protein_coding	Nup210	intron	ENSMUSG00000030091	NonProperStrand	22	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.1855
chr2	4829164	4829180	protein_coding	Sephs1	utr3	ENSMUSG00000026662	NonProperStrand	271	chr15	79913285	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-2.1925
chr16	23110481	23110571	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	chr13	21802443	21802523	tRNA	tRNA77-GlyGCC	.	971582	ProperStrand	5	1	-7.3464
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr10	80643990	80644064	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-1.3328
chr17	17097506	17097606	protein_coding	BC002059	intron	ENSMUSG00000060149	ProperStrand	10	chr17	24857799	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-5.6778
chr15	38227599	38230395	protein_coding	Klf10	utr5	ENSMUSG00000037465	ProperStrand	33	chr5	115939506	115939586	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-9.0665
chr13	51743569	51743691	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	chr7	116664795	116664921	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	19	-4.0953
chr5	130295414	130295490	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	chr15	98356776	98356912	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	2	-1.3855
chr5	33107512	33117045	protein_coding	RP23-118L1.1	exon	ENSMUSG00000093574	ProperStrand	9	chr6	115758027	115758117	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-9.3133
chr2	144116367	144116385	LTR	MLT2B2	ERVL	chr2MLT2B2144116217	NonProperStrand	17	chr3	88497853	88497980	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-10.0095
chr7	4745752	4746037	protein_coding	Rpl28	exon	ENSMUSG00000030432	ProperStrand	220	chr5	107303155	107303171	protein_coding	Hfm1	intron	ENSMUSG00000043410	ProperStrand	23	1	-12.6491
chr2	180320139	180320229	protein_coding	1600027N09Rik	utr3	ENSMUSG00000027569	ProperStrand	7	chrX	34622942	34623022	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-7.4170
chr4	56910496	56910628	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	chr7	29136525	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	22	-1.5278
chr13	62944660	62944677	protein_coding	Fbp2	intron	ENSMUSG00000021456	ProperStrand	100	chr8	74843686	74843710	protein_coding	Klf2	exon	ENSMUSG00000055148	ProperStrand	82	2	-18.3106
chr19	41289617	41291630	protein_coding	Tm9sf3	utr3	ENSMUSG00000025016	ProperStrand	21	chr19	8798521	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-11.7618
chr5	64648273	64648315	protein_coding	Tbc1d1	exon	ENSMUSG00000029174	ProperStrand	44	chr4	131908356	131908410	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.8887
chr13	64470414	64471576	protein_coding	Ctsl	utr5	ENSMUSG00000021477	ProperStrand	44	chr17	13115717	13115783	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	1	-8.1541
chr14	54416192	54416276	protein_coding-noncoding	B230359F08Rik	utr3	ENSMUSG00000087666	ProperStrand	2	chr10	110918591	110918633	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-inf
chr1	88423350	88423436	protein_coding	Ptma	utr5	ENSMUSG00000026238	ProperStrand	385	chr7	134671418	134671508	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-4.2403
chr8	113681631	113681686	protein_coding	Glg1	utr3	ENSMUSG00000003316	ProperStrand	83	chr4	80966366	80966382	protein_coding	Mpdz	exon	ENSMUSG00000028402	ProperStrand	21	1	-14.7691
chr19	46143562	46143651	protein_coding	Pprc1	exon	ENSMUSG00000055491	ProperStrand	143	chr16	23111374	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	16	-19.1026
chr11	113031588	113031688	lincRNA	2610035D17Rik	intron	ENSMUSG00000087259	ProperStrand	30	chr4	103235932	103236006	pseudogene	Gm12715	.	ENSMUSG00000059195	ProperStrand	1	1	-inf
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr15	10504965	10505038	protein_coding	Rai14	exon	ENSMUSG00000022246	ProperStrand	180	3	-6.4923
chr17	30731043	30749439	protein_coding	Glo1	exon	ENSMUSG00000024026	ProperStrand	75	chr16	23110964	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-2.4317
chr2	105233776	105233860	protein_coding	Rcn1	exon	ENSMUSG00000005973	ProperStrand	24	chr16	23110478	23110568	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.1305
chr7	123477423	123477448	protein_coding	Rps13	exon	ENSMUSG00000090862	ProperStrand	36	chr19	8798509	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	3	-14.3005
chr16	96268098	96268571	protein_coding	Brwd1	exon	ENSMUSG00000022914	ProperStrand	77	chr10	23505152	23505178	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-0.9127
chr11	69870769	69870785	protein_coding	Asgr1	exon	ENSMUSG00000020884	NonProperStrand	145	chr9	15121072	15121109	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	1	-7.9431
chrX	124061481	124061501	LTR	ETnERV2-int	ERVK	chrXETnERV2-int124060622	ProperStrand	1	chr5	108334195	108334269	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-inf
chr17	35822058	35822257	protein_coding	Ddr1	exon	ENSMUSG00000003534	ProperStrand	129	chr11	69481333	69481473	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	3	-5.2646
chr7	112789906	112789924	protein_coding	Fxc1	utr3	ENSMUSG00000089847	NonProperStrand	1	chr11	6428100	6428155	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-inf
chrX	130896770	130896799	protein_coding	Cenpi	utr3	ENSMUSG00000031262	ProperStrand	12	chr11	69483136	69483246	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-13.0838
chr7	17018140	17018175	protein_coding	Zc3h4	exon	ENSMUSG00000059273	ProperStrand	95	chr15	98356818	98356899	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	5	-19.9655
chr7	52563711	52563933	protein_coding	Trpm4	exon	ENSMUSG00000038260	ProperStrand	161	chr4	131865930	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.1320
chr5	76005431	76052159	protein_coding	Kit	utr3	ENSMUSG00000005672	ProperStrand	58	chr3	123210854	123210941	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-3.8170
chr19	42028176	42028244	protein_coding	Mms19	exon	ENSMUSG00000025159	ProperStrand	52	chr11	106362672	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-7.6901
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	119664282	119664299	protein_coding	Scn11a	exon	ENSMUSG00000034115	ProperStrand	55	1	-4.6294
chr9	64024929	64024998	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	chr10	110918574	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-0.9519
chr4	151389490	151389507	protein_coding	Klhl21	exon	ENSMUSG00000073700	ProperStrand	16	chr2	26494743	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.6366
chr9	15510296	15510313	LTR	RMER17B	ERVK	chr9RMER17B15509515	NonProperStrand	1	chr12	17553062	17553092	protein_coding	Odc1	intron	ENSMUSG00000011179	ProperStrand	173	1	-inf
chrX	133268632	133268708	protein_coding	Morf4l2	exon	ENSMUSG00000031422	ProperStrand	113	chr2	164286799	164286828	protein_coding	Sys1	utr5	ENSMUSG00000045503	ProperStrand	6	2	-inf
chr3	96218359	96218437	misc_RNA	Telomerase-vert	.	ENSMUSG00000064796	ProperStrand	443	chr7	135441311	135441328	protein_coding	BC017158	exon	ENSMUSG00000030780	ProperStrand	1	1	-inf
chr14	24989748	24991252	protein_coding	Dlg5	exon	ENSMUSG00000021782	ProperStrand	46	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	1	-7.5574
chr2	166721586	166721650	protein_coding	Arfgef2	utr3	ENSMUSG00000074582	ProperStrand	32	chr7	116663715	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-9.0691
chr6	71832545	71851959	protein_coding	Ptcd3	intron	ENSMUSG00000063884	ProperStrand	34	chr10	23505152	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-3.7873
chr4	140881151	140881241	protein_coding	Epha2	intron	ENSMUSG00000006445	ProperStrand	148	chr12	13247409	13247700	protein_coding	Ddx1	exon	ENSMUSG00000037149	ProperStrand	47	1	-11.9933
chr10	69617481	69617503	protein_coding	Ccdc6	exon	ENSMUSG00000048701	ProperStrand	72	chr2	26494708	26494800	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-4.8492
chrX	102993911	103026356	protein_coding	Atrx	utr3	ENSMUSG00000031229	ProperStrand	54	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-1.7104
chr2	27866775	27866791	protein_coding	Col5a1	exon	ENSMUSG00000026837	ProperStrand	35	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-6.9108
chr16	17777678	17777748	protein_coding-noncoding	Klhl22	utr5	ENSMUSG00000022750	ProperStrand	5	chr19	8837175	8837223	protein_coding	Nxf1	exon	ENSMUSG00000010097	ProperStrand	13	4	-20.2198
chr2	25312429	25313191	protein_coding	Clic3	exon	ENSMUSG00000015093	ProperStrand	79	chr16	23111372	23111503	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-1.8203
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr9	15119646	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-1.2569
chr17	25402066	25402097	protein_coding	Ube2i	exon	ENSMUSG00000015120	ProperStrand	20	chr4	131866163	131866253	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-9.4930
chr6	85396217	85396262	protein_coding	Smyd5	utr3	ENSMUSG00000033706	NonProperStrand	30	chr4	131865884	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	5	-13.3041
chr6	72388906	72388922	protein_coding	Mat2a	intron	ENSMUSG00000053907	ProperStrand	51	chr11	51551280	51551416	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	1	-8.0244
chr6	125078900	125078938	protein_coding	Chd4	exon	ENSMUSG00000063870	ProperStrand	303	chr5	74489595	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	4	-4.9720
chr16	22663900	22663919	Low_complexity	CT-rich	Low_complexity	chr16CT-rich22663883	NonProperStrand	1	chr11	120208576	120208595	protein_coding	Actg1	exon	ENSMUSG00000062825	ProperStrand	178	1	-inf
chr18	10052131	10052153	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr4	140723745	140723761	protein_coding	Fbxo42	exon	ENSMUSG00000028920	ProperStrand	91	1	-7.9682
chr5	142505665	142505681	protein_coding	Sdk1	intron	ENSMUSG00000039683	NonProperStrand	21	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-7.2962
chrX	20248896	20248921	protein_coding	Uba1	exon	ENSMUSG00000001924	ProperStrand	156	chr8	32260335	32260374	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	2	-4.9628
chr6	34996343	35001064	protein_coding	Cnot4	exon	ENSMUSG00000038784	ProperStrand	13	chr14	76372292	76372392	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	1	-12.1054
chr11	76212503	76212521	protein_coding	Nxn	exon	ENSMUSG00000020844	ProperStrand	20	chr4	155366536	155366553	protein_coding	B3galt6	exon	ENSMUSG00000050796	ProperStrand	40	1	-16.3729
chr5	92482152	92482172	lincRNA	Gm9793	exon	ENSMUSG00000092011	ProperStrand	3	chr16	23111445	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-6.9982
mmu-miR-1949	2	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr2	158185575	158185666	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	5	-8.9593
chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	chr17	24708943	24708996	protein_coding	Pkd1	exon	ENSMUSG00000032855	ProperStrand	61	1	-9.1759
chr8	41636290	41636306	protein_coding	Vps37a	utr3	ENSMUSG00000031600	NonProperStrand	1	chr1	162966813	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-inf
chr16	17354186	17354212	protein_coding	Pi4ka	exon	ENSMUSG00000041720	ProperStrand	39	chr7	150717296	150717316	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	2	-10.3103
chr2	90235292	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	122043475	122043509	protein_coding	Aldh2	utr5	ENSMUSG00000029455	ProperStrand	108	1	-3.3641
chr9	121657546	121657665	protein_coding	Nktr	exon	ENSMUSG00000032525	NonProperStrand	2	chr16	23110963	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	NonProperStrand	93	1	-20.0851
chr15	84038306	84038326	protein_coding	Samm50	exon	ENSMUSG00000022437	ProperStrand	51	chr7	116665164	116665260	protein_coding	Rpl27a	utr3	ENSMUSG00000046364	ProperStrand	149	1	-11.8156
chr17	24856728	24856754	antisense	Snhg9	.	ENSMUSG00000090101	ProperStrand	218	chr14	121663816	121663834	protein_coding	Farp1	intron	ENSMUSG00000025555	NonProperStrand	7	1	-15.1641
chr16	57391760	57391792	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr16	23110454	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	10	-1.8720
chr6	125112721	125112877	protein_coding	Gapdh	exon	ENSMUSG00000057666	ProperStrand	356	chr2	166890519	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-4.0895
chr10	90582438	90584680	protein_coding	Slc25a3	exon	ENSMUSG00000061904	ProperStrand	74	chr19	8800410	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-3.1477
chr16	3627753	3627770	LTR	IAPEY3-int	ERVK	chr16IAPEY3-int3625351	ProperStrand	8	chr4	131865854	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.4974
chr15	98860846	98864603	protein_coding	Tuba1c	exon	ENSMUSG00000043091	ProperStrand	28	chr4	41150098	41150134	snoRNA	ENSMUSG00000089265_SNORD121A	.	ENSMUSG00000089265	ProperStrand	370	2	-17.4016
chr11	6609374	6609454	LTR	MURVY-LTR	ERV1	chr11MURVY-LTR6609193	ProperStrand	1	chr11	6609095	6609185	LTR	MuRRS4-int	ERV1	chr11MuRRS4-int6608120	ProperStrand	1	1	-inf
chr2	144993787	145154172	protein_coding	Slc24a3	utr5	ENSMUSG00000063873	ProperStrand	9	chr16	23110483	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-10.0548
chr2	31529109	31529170	protein_coding	Exosc2	intron	ENSMUSG00000039356	ProperStrand	39	chr16	23111450	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-5.3425
chr2	103880898	103880964	snoRNA	ENSMUSG00000087739_SCARNA21	.	ENSMUSG00000087739	ProperStrand	50	chr16	23109027	23109049	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-7.6456
chr12	32003332	32003373	protein_coding	Lamb1	exon	ENSMUSG00000002900	ProperStrand	87	chr19	8800358	8800448	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-2.8593
chr3	101383536	101383557	protein_coding	Atp1a1	exon	ENSMUSG00000033161	ProperStrand	316	chr11	35853255	35853271	protein_coding	Odz2	exon	ENSMUSG00000049336	ProperStrand	106	1	-8.8435
chr5	123622050	123622066	protein_coding	Hpd	exon	ENSMUSG00000029445	ProperStrand	254	chr8	29870213	29870234	protein_coding	Unc5d	intron	ENSMUSG00000063626	ProperStrand	22	1	-12.4526
chrX	34355203	34355283	lincRNA	2310010G23Rik	exon	ENSMUSG00000090647	ProperStrand	1	chr9	15119304	15119394	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-inf
chr2	180922967	180923057	protein_coding	Ppdpf	utr3	ENSMUSG00000016344	ProperStrand	7	chr7	148634739	148634819	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-8.2990
chr10	126532147	126532163	protein_coding	Os9	utr3	ENSMUSG00000040462	NonProperStrand	28	chr4	131908689	131908808	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-11.6029
chr2	158182156	158182179	lincRNA	9430008C03Rik	intron	ENSMUSG00000085385	ProperStrand	1039	chr1	10199705	10199759	protein_coding	Arfgef1	exon	ENSMUSG00000067851	ProperStrand	54	5	-19.5591
chr16	23113179	23113234	protein_coding	Eif4a2	utr3	ENSMUSG00000022884	ProperStrand	356	chr19	8800354	8800444	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	5	-5.2010
chr10	90579837	90580004	protein_coding	Slc25a3	exon	ENSMUSG00000061904	ProperStrand	74	chr5	121655039	121655095	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.3609
chr3	107272367	107272383	protein_coding	Slc6a17	utr3	ENSMUSG00000027894	NonProperStrand	2	chr4	131865380	131865503	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	2	-inf
chr5	77738902	77738918	protein_coding	Noa1	exon	ENSMUSG00000036285	ProperStrand	147	chr11	69481432	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-1.6926
chr9	20724337	20724372	protein_coding	Dnmt1	exon	ENSMUSG00000004099	ProperStrand	91	chr6	108325059	108325102	protein_coding	Itpr1	intron	ENSMUSG00000030102	ProperStrand	94	1	-11.5738
chr14	56290666	56290687	protein_coding	Nedd8	utr5	ENSMUSG00000010376	ProperStrand	27	chr19	8800355	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	3	-11.9876
chr11	97642952	97643089	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	chr2	130103748	130103811	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	10	-3.7779
chr18	39543637	39543727	antisense	Gm15337	.	ENSMUSG00000085289	ProperStrand	2	chr7	133124539	133124629	protein_coding	Gsg1l	intron	ENSMUSG00000046182	ProperStrand	14	1	-inf
chr2	68583602	68583619	protein_coding	4932414N04Rik	exon	ENSMUSG00000079324	ProperStrand	7	chr15	34370585	34370666	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-7.8301
chr7	52068628	52068665	protein_coding	Atf5	exon	ENSMUSG00000038539	ProperStrand	11	chr3	123210859	123210961	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	4	-16.7925
chrX	45274516	45274606	protein_coding	Ocrl	intron	ENSMUSG00000001173	ProperStrand	9	chr11	62590593	62590631	snoRNA	ENSMUSG00000064692_SNORA67	.	ENSMUSG00000064692	ProperStrand	185	1	-14.9331
chr11	97466985	97467016	lincRNA	2410003L11Rik	intron	ENSMUSG00000085860	ProperStrand	9	chr11	6428089	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-6.9084
chr11	88916753	88916826	protein_coding	Dgke	exon	ENSMUSG00000000276	ProperStrand	8	chr16	23110931	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.2180
chr11	42440243	42440259	protein_coding	Gabrb2	exon	ENSMUSG00000007653	ProperStrand	248	chr1	34248713	34248776	protein_coding	Dst	utr5	ENSMUSG00000026131	ProperStrand	461	1	-6.4091
chr11	12286672	12286697	protein_coding	Cobl	exon	ENSMUSG00000020173	ProperStrand	133	chr17	24857716	24857777	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	3	-3.4418
chr3	32820061	32820078	protein_coding	Usp13	intron	ENSMUSG00000056900	ProperStrand	15	chr15	79913287	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-6.2900
chr14	20451772	20451789	LTR	IAPLTR3-int	ERVK	chr14IAPLTR3-int20447903	ProperStrand	44	chr16	23111432	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.7117
chr1	38076139	38076230	protein_coding	Eif5b	exon	ENSMUSG00000026083	ProperStrand	118	chr1	16092849	16092865	protein_coding	Rpl7	exon	ENSMUSG00000043716	ProperStrand	93	2	-17.2687
chr8	12757419	12757437	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr17	36000485	36000501	protein_coding	Nrm	exon	ENSMUSG00000059791	ProperStrand	253	1	-5.7437
chr3	135128521	135128542	protein_coding	Ube2d3	utr3	ENSMUSG00000078578	ProperStrand	34	chr19	8799043	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	3	-15.8023
chr4	140278487	140278616	protein_coding	Rcc2	utr3	ENSMUSG00000040945	ProperStrand	228	chr2	41199972	41199989	protein_coding	Lrp1b	exon	ENSMUSG00000049252	ProperStrand	376	4	-20.4385
chr6	83111671	83111687	protein_coding	1700003E16Rik	exon	ENSMUSG00000030030	ProperStrand	352	chr5	108336363	108336425	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-3.1788
chrX	132334769	132334872	protein_coding	Gprasp1	exon	ENSMUSG00000043384	ProperStrand	57	chr16	23111416	23111448	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.3302
chr7	138705873	138705905	protein_coding	Bub3	intron	ENSMUSG00000066979	ProperStrand	24	chr19	8798740	8798813	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	4	-19.9797
chr19	7349135	7349177	protein_coding	Rcor2	utr3	ENSMUSG00000024968	ProperStrand	120	chr1	162965980	162966044	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-2.3735
chrX	46059606	46062162	protein_coding	Rbmx2	exon	ENSMUSG00000031107	ProperStrand	7	chr1	9932550	9932578	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-12.1456
chr15	99831311	99831384	protein_coding	Larp4	exon	ENSMUSG00000023025	ProperStrand	41	chr8	129468758	129468848	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-5.1486
chr7	116663665	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	chr15	57807529	57807582	tRNA	tRNA913-MetCAT	.	690902	ProperStrand	48	1	-2.9014
chr11	105917726	105917747	protein_coding	Dcaf7	utr3	ENSMUSG00000049354	ProperStrand	30	chr6	124665354	124665454	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	1	-8.3223
chr3	88124407	88124441	protein_coding	Cct3	exon	ENSMUSG00000001416	ProperStrand	82	chr7	86871487	86871503	protein_coding	Plin1	exon	ENSMUSG00000030546	NonProperStrand	2	1	-20.6649
chr14	117682705	117682724	protein_coding	Gpc6	intron	ENSMUSG00000058571	ProperStrand	28	chr18	33954816	33954895	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-4.9550
chr9	21823257	21823273	protein_coding	Elavl3	exon	ENSMUSG00000003410	NonProperStrand	137	chr4	132927972	132928015	protein_coding	Slc9a1	intron	ENSMUSG00000028854	ProperStrand	28	1	-13.1985
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr5	136614841	136615335	protein_coding	Alkbh4	utr5	ENSMUSG00000039754	ProperStrand	40	1	-8.6081
chr5	122580412	122584741	protein_coding	Ccdc63	utr5	ENSMUSG00000043036	ProperStrand	120	chr1	88248582	88248600	snoRNA	ENSMUSG00000064696_SNORD20	.	ENSMUSG00000064696	ProperStrand	89	1	-11.1291
chr2	145076804	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	chr3	108357255	108357358	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	2	-0.7625
chrX	68675910	68677255	protein_coding	Cd99l2	exon	ENSMUSG00000035776	ProperStrand	16	chr2	26768415	26768433	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-8.2494
chr2	3428451	3428501	protein_coding	Hspa14	utr5	ENSMUSG00000079615	ProperStrand	14	chr17	24665481	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	7	-21.0897
chr9	45203609	45203699	protein_coding	Fxyd6	utr3	ENSMUSG00000066705	ProperStrand	30	chr4	131865902	131865982	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.9337
chr9	106114152	106114594	protein_coding	Twf2	exon	ENSMUSG00000023277	ProperStrand	10	chr16	23110914	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-5.0079
chr16	33625246	33646649	protein_coding	Slc12a8	exon	ENSMUSG00000035506	ProperStrand	52	chr4	96412508	96412526	protein_coding	Gm12695	intron	ENSMUSG00000078639	ProperStrand	110	1	-12.3856
chr4	141076801	141076901	protein_coding	Spen	intron	ENSMUSG00000040761	ProperStrand	161	chr10	23505559	23505594	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	10	-20.8062
chr1	20552541	20552558	protein_coding	Pkhd1	exon	ENSMUSG00000043760	NonProperStrand	49	chr11	5682123	5682139	pseudogene	2210015D19Rik	.	ENSMUSG00000083844	ProperStrand	24	1	-15.5864
chr8	94033766	94033785	protein_coding	Fto	intron	ENSMUSG00000055932	ProperStrand	34	chrX	71517852	71517962	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	5	-19.1913
chr3	103719029	103732306	protein_coding	Rsbn1	exon	ENSMUSG00000044098	ProperStrand	32	chr9	120037902	120037992	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-5.9342
chr1	157780228	157780244	protein_coding	Cep350	exon	ENSMUSG00000033671	ProperStrand	48	chr17	39985368	39985424	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-6.3727
chr19	9018504	9018570	protein_coding	Mta2	exon	ENSMUSG00000071646	ProperStrand	70	chr7	116663732	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	7	-16.2621
chr13	74461374	74464376	protein_coding	Sdha	exon	ENSMUSG00000021577	ProperStrand	70	chr15	79908929	79908957	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-5.1724
chr17	23952141	23952231	protein_coding	Srrm2	exon	ENSMUSG00000039218	ProperStrand	521	chr19	4907598	4907678	protein_coding	Dpp3	utr3	ENSMUSG00000063904	ProperStrand	36	1	-10.0156
chr4	66065356	66065373	protein_coding	Astn2	exon	ENSMUSG00000028373	ProperStrand	18	chr8	129468799	129468877	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-6.7854
chr13	74315801	74315875	protein_coding	Exoc3	intron	ENSMUSG00000034152	ProperStrand	9	chr11	69483146	69483236	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-6.0733
chr18	21054478	21054494	protein_coding	Trappc8	exon	ENSMUSG00000033382	ProperStrand	43	chr18	73693167	73693187	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-6.1796
chr8	74186553	74186623	protein_coding	Unc13a	intron	ENSMUSG00000034799	ProperStrand	13	chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	1	-11.7048
chr10	110944252	110944268	protein_coding	Phlda1	exon	ENSMUSG00000020205	NonProperStrand	1	chr5	108334207	108334245	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-inf
chr11	45742437	45742507	protein_coding	Lsm11	utr3	ENSMUSG00000044847	ProperStrand	2	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-14.4340
chr17	24858051	24858243	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr2	26494708	26494825	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	5	-3.9342
chr17	34092064	34092082	protein_coding	Rps18	exon	ENSMUSG00000008668	ProperStrand	111	chr15	99544198	99544298	protein_coding	Smarcd1	utr3	ENSMUSG00000023018	ProperStrand	43	1	-12.7507
chr7	19722633	19722649	protein_coding	Fbxo46	utr3	ENSMUSG00000050428	NonProperStrand	24	chr18	75161108	75161173	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	1	-10.8736
chr2	20890536	20890553	Low_complexity	GC_rich	Low_complexity	chr2GC_rich20890521	NonProperStrand	1	chr19	29722465	29722489	protein_coding	Ermp1	intron	ENSMUSG00000046324	NonProperStrand	7	1	-inf
chr3	30508798	30508878	protein_coding	Mynn	intron	ENSMUSG00000037730	ProperStrand	9	chr10	23505188	23505278	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.5477
chr4	144746168	144746187	protein_coding	Vps13d	exon	ENSMUSG00000020220	NonProperStrand	4	chr11	83107808	83107884	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	1	-14.5182
chr8	87196498	87196577	protein_coding	Nacc1	utr3	ENSMUSG00000001910	ProperStrand	130	chr18	35102297	35102337	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-5.0761
chr5	37506104	37506121	protein_coding	Jakmip1	intron	ENSMUSG00000063646	ProperStrand	21	chr11	68886975	68887024	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-6.1936
chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	chr11	6428060	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-1.0028
chr1	102076760	102076790	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	chr4	122970425	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-3.6659
chr15	89190837	89190875	protein_coding	Ncaph2	exon	ENSMUSG00000008690	ProperStrand	65	chr16	23111407	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-5.1582
chr13	52742450	52742466	protein_coding	Syk	utr3	ENSMUSG00000021457	NonProperStrand	125	chr5	34694643	34694685	protein_coding	Rnf4	utr3	ENSMUSG00000029110	ProperStrand	27	1	-13.4544
chr4	133560645	133560753	protein_coding	Lin28a	utr3	ENSMUSG00000050966	ProperStrand	55	chr18	73693109	73693150	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	2	-9.3006
chr17	46861595	46861611	protein_coding	Pex6	exon	ENSMUSG00000002763	ProperStrand	292	chr8	13171299	13171369	protein_coding	Lamp1	exon	ENSMUSG00000031447	ProperStrand	92	1	-9.2842
chr4	68423441	68423457	protein_coding	Dbc1	exon	ENSMUSG00000028351	ProperStrand	78	chr7	29136526	29136547	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.9343
chr6	83111671	83111687	protein_coding	1700003E16Rik	exon	ENSMUSG00000030030	ProperStrand	352	chr17	35299507	35299561	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-1.6507
chr15	99079928	99080373	protein_coding	Mcrs1	exon	ENSMUSG00000037570	ProperStrand	46	chr11	97642952	97642998	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.9356
chr15	81417048	81438740	protein_coding	Ep300	utr5	ENSMUSG00000055024	ProperStrand	118	chr16	23111771	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	14	-20.7093
chr11	59305657	59305699	protein_coding	Zkscan17	exon	ENSMUSG00000020472	ProperStrand	23	chr4	131908235	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-10.5928
chr11	118130364	118130431	protein_coding	Usp36	exon	ENSMUSG00000033909	ProperStrand	27	chr14	31953025	31953118	protein_coding	Stab1	exon	ENSMUSG00000042286	NonProperStrand	127	1	-13.4261
chr5	147646732	147646848	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	chr1	145626085	145626192	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	2	-6.1104
chr15	57947318	57947390	protein_coding	Atad2	exon	ENSMUSG00000022360	ProperStrand	47	chr7	29136572	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.7863
chrX	149828130	149828146	protein_coding	Klf8	utr3	ENSMUSG00000041649	NonProperStrand	107	chr7	29136525	29136610	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.4535
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr14	57287192	57287208	protein_coding	Mphosph8	exon	ENSMUSG00000079184	ProperStrand	29	2	-9.6062
chr15	81110991	81111009	SINE	ID4	ID	chr15ID481110956	ProperStrand	272	chr7	13516168	13516203	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	1	-5.6745
chr8	42411268	42412907	protein_coding	Pcm1	exon	ENSMUSG00000031592	ProperStrand	57	chr17	24857794	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.3832
chr10	5862164	5862184	snRNA	ENSMUSG00000065371_U1	.	ENSMUSG00000065371	ProperStrand	2	chr4	131865856	131865946	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-8.7800
chr10	82213069	82213163	protein_coding	Nfyb	utr3	ENSMUSG00000020248	ProperStrand	25	chr11	97643015	97643070	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.0636
chr9	3430499	3430555	protein_coding	Cwf19l2	exon	ENSMUSG00000025898	ProperStrand	21	chr8	113362430	113362455	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	1	-11.3908
chr12	114298370	114298938	protein_coding	Pacs2	exon	ENSMUSG00000021143	ProperStrand	14	chr8	73419657	73419707	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-5.9313
chr16	23110456	23110575	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	chr1	129228395	129228514	snoRNA	ENSMUSG00000093146_AC131793.1	.	ENSMUSG00000093146	ProperStrand	119	3	-4.1131
chr5	137161410	137161500	LTR	RLTR11A	ERVK	chr5RLTR11A137161088	NonProperStrand	1	chr5	137161674	137161764	SINE	B4	B4	chr5B4137161691	ProperStrand	1	1	-inf
chr2	120333443	120333470	protein_coding	Zfp106	utr3	ENSMUSG00000027288	ProperStrand	199	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-5.8065
chr4	44045443	44045463	protein_coding	Clta	utr3	ENSMUSG00000028478	ProperStrand	59	chr9	120037898	120037975	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	2	-7.8505
chr8	60045305	60045321	protein_coding	Galnt7	intron	ENSMUSG00000031608	NonProperStrand	16	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-10.4162
chr2	166408688	166408709	protein_coding	Prex1	exon	ENSMUSG00000039621	ProperStrand	20	chr4	131908357	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.2521
chr7	73206213	73206230	protein_coding	Snrpa1	intron	ENSMUSG00000030512	NonProperStrand	6	chr17	24856620	24856753	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	4	-18.9267
chr14	99498894	99498911	protein_coding	Pibf1	utr5	ENSMUSG00000022064	ProperStrand	32	chr9	120039544	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	12	-19.6791
chr2	11510580	11510651	protein_coding	Rbm17	exon	ENSMUSG00000037197	ProperStrand	50	chr5	121655017	121655107	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.0898
chr8	125626932	125626983	snoRNA	ENSMUSG00000064450_Snord68	.	ENSMUSG00000064450	ProperStrand	181	chr9	120039563	120039653	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	4	-6.0920
chr16	4974324	4974345	protein_coding	4930451G09Rik	intron	ENSMUSG00000022543	NonProperStrand	1	chr9	64022855	64022899	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-inf
chr4	117895906	117896333	protein_coding	Ptprf	exon	ENSMUSG00000033295	NonProperStrand	7	chr16	23111410	23111500	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	NonProperStrand	38	2	-22.5722
chr4	120459818	120459839	protein_coding	Nfyc	intron	ENSMUSG00000032897	NonProperStrand	3	chr2	26768393	26768433	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-11.9253
chr6	44892312	44892392	LINE	L1_Mus2	L1	chr6L1_Mus244892246	NonProperStrand	1	chr6	44892497	44892587	LINE	Lx7	L1	chr6Lx744892398	NonProperStrand	1	1	-inf
chr8	87366537	87366620	protein_coding	Calr	utr3	ENSMUSG00000003814	ProperStrand	232	chr1	173433204	173433256	protein_coding	B930036N10Rik	utr3	ENSMUSG00000091993	ProperStrand	150	2	-13.9144
chr5	121658857	121658900	protein_coding	Rpl6	exon	ENSMUSG00000029614	ProperStrand	332	chr17	46447172	46447331	protein_coding	Abcc10	exon	ENSMUSG00000032842	NonProperStrand	5	1	-15.0373
chr2	169934181	169934210	protein_coding	Zfp217	utr3	ENSMUSG00000052056	ProperStrand	79	chr9	120039581	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	14	-inf
chr7	25673378	25674817	protein_coding	Rps19	utr3	ENSMUSG00000040952	ProperStrand	101	chr16	23110831	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-0.9149
mmu-miR-1912-5p	0	17	miRNA	mmu-miR-1912-5p	.	mmu-miR-1912-5p	NonProperStrand	36	chr1	173433210	173433254	protein_coding	B930036N10Rik	utr3	ENSMUSG00000091993	ProperStrand	150	1	-12.5062
chr14	32292824	32292873	protein_coding	Mettl6	exon	ENSMUSG00000021891	ProperStrand	8	chr18	35716786	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-14.3467
chr4	150482469	150482569	protein_coding	Camta1	utr5	ENSMUSG00000014592	ProperStrand	170	chr7	150717298	150717350	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-3.5257
chr3	96218558	96218625	misc_RNA	Telomerase-vert	.	ENSMUSG00000064796	ProperStrand	443	chr17	35087894	35087946	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	2	-3.0217
chr10	18393547	18393563	protein_coding	D10Bwg1379e	intron	ENSMUSG00000019852	NonProperStrand	120	chr9	15119631	15119709	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.5126
chr9	103401280	103401296	protein_coding	Tmem108	exon	ENSMUSG00000042757	NonProperStrand	323	chr5	108336373	108336409	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-3.3923
chr9	110453877	110472297	protein_coding	Setd2	exon	ENSMUSG00000044791	ProperStrand	51	chr10	110918591	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-6.3475
chr17	46938272	46938343	protein_coding	BC032203	exon	ENSMUSG00000036568	ProperStrand	64	chr19	8799022	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	2	-9.3140
chrX	34335663	34335719	protein_coding	Slc25a5	utr5	ENSMUSG00000016319	ProperStrand	55	chr4	116827117	116827186	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	5	-19.3271
chr10	32343865	32343955	LINE	Lx3_Mus	L1	chr10Lx3_Mus32343763	NonProperStrand	1	chr17	24857716	24857779	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-inf
chr11	69266814	69266830	protein_coding	Dnahc2	exon	ENSMUSG00000005237	ProperStrand	95	chr5	89663839	89663855	protein_coding	Slc4a4	exon	ENSMUSG00000060961	NonProperStrand	195	1	-10.0262
chr9	39358287	39358304	protein_coding	Olfr958	exon	ENSMUSG00000050853	NonProperStrand	266	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-4.3010
chr11	106031691	106031721	protein_coding	Strada	intron	ENSMUSG00000069631	ProperStrand	7	chr1	89673646	89673736	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-7.5185
chr1	60536020	60536110	protein_coding	Abi2	utr3	ENSMUSG00000026782	ProperStrand	15	chr5	3960189	3960269	protein_coding	Akap9	exon	ENSMUSG00000040407	ProperStrand	28	1	-17.4793
chr7	112306167	112306184	protein_coding	Olfr684	exon	ENSMUSG00000047225	ProperStrand	2	chr17	35088963	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	2	-inf
chr8	11007589	11007689	protein_coding	Irs2	exon	ENSMUSG00000038894	ProperStrand	2	chr11	101466308	101466351	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	1	-16.3718
chr7	52256476	52256566	protein_coding-noncoding	Irf3	utr5	ENSMUSG00000003184	NonProperStrand	1	chr7	52257033	52257123	protein_coding	Irf3	exon	ENSMUSG00000003184	NonProperStrand	1	1	-inf
chr14	9340042	9340098	protein_coding	4930452B06Rik	intron	ENSMUSG00000021747	ProperStrand	8	chr7	116664791	116664881	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-6.4335
chr16	17642730	17642783	protein_coding	Smpd4	exon	ENSMUSG00000005899	ProperStrand	33	chr9	63042015	63042031	protein_coding	Map2k5	exon	ENSMUSG00000058444	ProperStrand	193	1	-12.1774
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr3	157729963	157729979	protein_coding	Lrrc40	utr3	ENSMUSG00000063052	ProperStrand	147	1	-7.1404
chr9	78327268	78327440	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr11	74718963	74719010	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	1	-2.3347
chr7	137690810	137690837	protein_coding	Nsmce4a	utr5	ENSMUSG00000040331	ProperStrand	14	chr16	23111434	23111505	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-6.3756
chr11	100747201	100747219	protein_coding	Stat3	utr3	ENSMUSG00000004040	NonProperStrand	4	chr12	17553062	17553082	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-10.7041
chr4	85016349	85016365	protein_coding	Sh3gl2	intron	ENSMUSG00000028488	NonProperStrand	313	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-1.5381
chr4	14753680	14753698	protein_coding	Otud6b	utr5	ENSMUSG00000040550	NonProperStrand	4	chr15	79913295	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-9.1208
chr1	16091922	16092881	protein_coding	Rpl7	exon	ENSMUSG00000043716	ProperStrand	93	chr16	23111690	23111780	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	6	-9.2178
chr11	102294590	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr14	65372864	65372889	snoRNA	ENSMUSG00000064442_SNORA36	.	ENSMUSG00000064442	ProperStrand	296	1	-5.7319
chr18	24162810	24162879	protein_coding	Zfp35	utr3	ENSMUSG00000063281	ProperStrand	3	chr4	131908689	131908736	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-6.9471
chr7	85880626	85880706	LINE	L1MD2	L1	chr7L1MD285880396	ProperStrand	1	chr7	85880988	85881078	LINE	L1MD2	L1	chr7L1MD285880855	ProperStrand	1	1	-inf
chr1	79723105	79723122	protein_coding	Wdfy1	exon	ENSMUSG00000073643	NonProperStrand	2	chr16	23111385	23111414	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-8.0851
chr19	5105012	5105102	protein_coding	Rab1b	intron	ENSMUSG00000024870	ProperStrand	133	chr2	26494733	26494813	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.7660
chr9	102237497	102237519	protein_coding	Ephb1	intron	ENSMUSG00000032537	ProperStrand	13	chr7	116663738	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-5.3924
chr10	127485169	127485194	protein_coding	Naca	intron	ENSMUSG00000061315	ProperStrand	50	chr16	23111718	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.1991
chr13	24844098	24845315	protein_coding	Gmnn	exon	ENSMUSG00000006715	ProperStrand	7	chr16	23110990	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.4785
chr7	140136033	140136123	protein_coding	Zranb1	intron	ENSMUSG00000030967	ProperStrand	13	chr11	6428077	6428157	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-10.0847
chr18	16933117	16966848	protein_coding	Cdh2	exon	ENSMUSG00000024304	ProperStrand	71	chr3	153575125	153575169	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	1	-8.1585
chr1	127302542	127303911	protein_coding	Actr3	exon	ENSMUSG00000026341	ProperStrand	45	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-7.5566
chr4	138952298	138952347	protein_coding	Ubr4	intron	ENSMUSG00000066036	ProperStrand	304	chr7	117189879	117189968	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-1.6554
chr5	65952377	65952395	protein_coding	Ube2k	intron	ENSMUSG00000029203	ProperStrand	289	chr5	111105684	111105897	protein_coding	Ep400	exon	ENSMUSG00000029505	ProperStrand	176	1	-8.0105
chr13	113789095	113789112	protein_coding	Gm6320	exon	ENSMUSG00000074651	ProperStrand	26	chr7	117189932	117189980	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.9171
chr18	82662186	82662202	protein_coding	Mbp	intron	ENSMUSG00000041607	NonProperStrand	185	chr7	19591412	19591428	protein_coding	Irf2bp1	exon	ENSMUSG00000044030	NonProperStrand	81	1	-10.4512
chr9	20890821	20890911	protein_coding	Raver1	exon	ENSMUSG00000010205	ProperStrand	69	chr17	24856672	24856752	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	9	-20.2328
chr4	129024117	129024134	protein_coding	Zbtb8os	exon	ENSMUSG00000057572	ProperStrand	15	chr9	15119640	15119725	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-8.6893
chr17	84857199	84857223	protein_coding	Thada	exon	ENSMUSG00000024251	ProperStrand	47	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-7.4697
chr2	92440278	92440296	protein_coding	Chst1	utr5	ENSMUSG00000027221	ProperStrand	17	chr15	34370545	34370625	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-5.9911
chr16	11144138	11144276	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr8	107671125	107671971	protein_coding	Ces4a	exon	ENSMUSG00000060560	ProperStrand	2	1	-18.2639
chr10	20080840	20080861	protein_coding	Fam54a	utr3	ENSMUSG00000019992	ProperStrand	232	chr18	35714144	35714253	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	4	-5.3257
chr19	10525980	10525997	protein_coding	Syt7	utr3	ENSMUSG00000024743	NonProperStrand	17	chr17	35299507	35299631	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	3	-16.5826
chr2	92189066	92189572	protein_coding	Phf21a	exon	ENSMUSG00000058318	ProperStrand	25	chr15	81937523	81937539	protein_coding	Mei1	exon	ENSMUSG00000068117	ProperStrand	53	1	-15.3284
chr4	141325881	141326823	protein_coding	Dnajc16	exon	ENSMUSG00000040697	ProperStrand	12	chr1	39605594	39605684	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-10.6135
chr5	100855944	100855974	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr16	37384897	37384913	protein_coding	Stxbp5l	utr5	ENSMUSG00000022829	ProperStrand	332	1	-3.3588
chr2	22444457	22444962	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	chr16	23111694	23111837	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	14	-1.9861
chr11	97023976	97024721	protein_coding	Kpnb1	exon	ENSMUSG00000001440	ProperStrand	197	chr2	145076804	145209249	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	2	-8.8061
chr17	56896715	56896805	protein_coding	Nrtn	utr5	ENSMUSG00000039481	ProperStrand	5	chr1	120457596	120457675	protein_coding	Clasp1	exon	ENSMUSG00000064302	ProperStrand	23	1	-18.8987
chr13	9833569	9833658	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr1	9932548	9932626	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	2	-1.0975
chr7	149170855	149171340	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	chrX	34622906	34622991	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-1.4699
chr11	102855417	102860974	protein_coding	Dcakd	utr3	ENSMUSG00000020935	ProperStrand	61	chr3	123210857	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-3.6856
chr13	59806183	59806263	protein_coding	Fam75d3	intron	ENSMUSG00000050876	ProperStrand	46	chr4	131865413	131865503	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-4.5072
chr11	68887042	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	chr2	26768049	26768119	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	2	-0.9506
chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	chr18	61310081	61310154	protein_coding	Hmgxb3	exon	ENSMUSG00000024622	ProperStrand	25	1	-10.9784
chrX	156241750	156315519	protein_coding	Sh3kbp1	intron	ENSMUSG00000040990	ProperStrand	67	chr16	23110829	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-2.8648
chr6	120909192	120909279	protein_coding	Mical3	exon	ENSMUSG00000051586	ProperStrand	104	chr15	98350147	98350237	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-3.7197
chr2	129036581	129036618	protein_coding	Slc20a1	utr3	ENSMUSG00000027397	ProperStrand	81	chr14	31827478	31827547	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-6.3505
chr5	15585977	15585995	protein_coding	Cacna2d1	intron	ENSMUSG00000040118	NonProperStrand	13	chr10	23506278	23506321	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	2	-15.9531
chr9	30235085	30235102	protein_coding	Snx19	exon	ENSMUSG00000031993	ProperStrand	353	chr2	26494762	26494829	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-1.1504
chr14	71004508	71004525	protein_coding	Epb4.9	utr3	ENSMUSG00000022099	NonProperStrand	2	chr6	61805711	61805728	protein_coding	Fam190a	intron	ENSMUSG00000039578	NonProperStrand	24	1	-inf
chr17	30162510	30162531	protein_coding	Zfand3	intron	ENSMUSG00000044477	ProperStrand	20	chr1	63225577	63225655	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-8.8769
chr10	79199175	79199346	protein_coding	Polrmt	exon	ENSMUSG00000020329	ProperStrand	11	chr16	49145257	49145274	protein_coding	Myh15	exon	ENSMUSG00000092009	ProperStrand	9	1	-19.9764
chr1	88253307	88253612	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chr9	78326455	78326535	protein_coding	Eef1a1	utr3	ENSMUSG00000037742	ProperStrand	1990	1	-1.0764
chr8	73310649	73310667	protein_coding	Mast3	exon	ENSMUSG00000031833	ProperStrand	23	chr5	108334195	108334247	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-6.7107
chr13	23409361	23409409	processed_transcript	4930586N03Rik	.	ENSMUSG00000087097	ProperStrand	6	chrX	156315498	156315519	protein_coding	Sh3kbp1	intron	ENSMUSG00000040990	ProperStrand	67	1	-17.5421
chr11	98865521	98865604	protein_coding	Top2a	exon	ENSMUSG00000020914	ProperStrand	324	chr9	120039544	120039634	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-0.7354
chr19	16695197	16710272	protein_coding	Vps13a	exon	ENSMUSG00000046230	NonProperStrand	8	chr17	24857752	24857852	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-6.1404
chr8	77647839	77648722	protein_coding	Mcm5	exon	ENSMUSG00000005410	ProperStrand	199	chr9	4299367	4302483	protein_coding	Aasdhppt	exon	ENSMUSG00000025894	ProperStrand	121	1	-9.5011
chr10	36226988	36227011	protein_coding	Hs3st5	utr5	ENSMUSG00000044499	ProperStrand	12	chr8	98269959	98270083	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-8.7817
chr15	36723291	36723328	protein_coding	Ywhaz	utr5	ENSMUSG00000022285	ProperStrand	73	chr4	85016349	85016365	protein_coding	Sh3gl2	intron	ENSMUSG00000028488	NonProperStrand	313	1	-9.6093
chr2	26493471	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr2	26203131	26203147	protein_coding	Gpsm1	utr3	ENSMUSG00000026930	ProperStrand	93	1	-5.3360
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr4	57706987	57707003	protein_coding	Palm2	intron	ENSMUSG00000090053	NonProperStrand	187	1	-5.5512
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr7	26122811	26122892	protein_coding	Megf8	exon	ENSMUSG00000045039	ProperStrand	100	2	-8.0993
chr10	62486295	62486313	protein_coding	Hnrnph3	intron	ENSMUSG00000020069	NonProperStrand	6	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-12.4916
chr15	93290134	93290151	protein_coding	Pphln1	exon	ENSMUSG00000036167	ProperStrand	20	chr8	73032326	73033207	protein_coding	2810422J05Rik	exon	ENSMUSG00000055553	ProperStrand	171	1	-13.4399
chr7	52299137	52301130	protein_coding	Prr12	exon	ENSMUSG00000046574	ProperStrand	86	chr8	73222036	73222053	protein_coding	Jund	utr5	ENSMUSG00000071076	ProperStrand	50	1	-12.9583
chr3	159213953	159213970	Other	RMER1A	Other	chr3RMER1A159212973	ProperStrand	1	chr18	24363855	24363872	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	1	-inf
chr1	45488603	45488620	protein_coding	Col5a2	intron	ENSMUSG00000026042	ProperStrand	184	chr19	8963118	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-0.6997
chr13	103895241	103895257	protein_coding	Mast4	intron	ENSMUSG00000034751	ProperStrand	150	chr10	127485132	127485305	protein_coding	Naca	exon	ENSMUSG00000061315	ProperStrand	50	1	-11.8420
chr19	5802057	5802147	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr11	98877458	98877538	protein_coding	Top2a	exon	ENSMUSG00000020914	ProperStrand	324	1	-4.2543
chr9	85220675	85220691	protein_coding	Fam46a	utr5	ENSMUSG00000032265	NonProperStrand	21	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-9.8582
chr5	130007785	130007885	protein_coding	Sfswap	intron	ENSMUSG00000029439	ProperStrand	34	chr2	130102008	130102083	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-6.4765
chr3	63823476	63823523	protein_coding	Gmps	utr3	ENSMUSG00000027823	ProperStrand	30	chr11	97642952	97642968	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.7184
chr11	69037669	69037685	protein_coding	Gucy2e	exon	ENSMUSG00000020890	NonProperStrand	99	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-6.7443
chr1	165883488	165883578	protein_coding	BC055324	intron	ENSMUSG00000041406	ProperStrand	35	chr12	106269360	106269440	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-5.1779
chr4	153534526	153534542	protein_coding	Tprgl	exon	ENSMUSG00000029030	ProperStrand	50	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.0577
chr2	25105521	25107254	protein_coding	Ndor1	exon	ENSMUSG00000006471	NonProperStrand	84	chr15	38008367	38008385	protein_coding	Ubr5	utr5	ENSMUSG00000037487	ProperStrand	258	1	-9.7136
chr1	173165460	173166503	protein_coding	Ndufs2	exon	ENSMUSG00000013593	ProperStrand	32	chr9	15119631	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-9.3323
chr5	76050617	76050636	protein_coding	Kit	utr3	ENSMUSG00000005672	ProperStrand	58	chr5	122919775	122921228	protein_coding	Atp2a2	exon	ENSMUSG00000029467	ProperStrand	166	1	-11.3398
chr2	121949511	121949527	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	chr13	96100558	96100648	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	3	-11.9622
chr5	115593473	115593515	protein_coding	Mlec	utr3	ENSMUSG00000048578	ProperStrand	47	chr5	108336439	108336494	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-5.3555
chr6	122378623	122378703	LINE	L1MA4A	L1	chr6L1MA4A122378612	ProperStrand	1	chr6	122378771	122378861	SINE	B3A	B2	chr6B3A122378718	ProperStrand	1	1	-inf
chr12	70838890	70838945	protein_coding	Atp5s	utr5	ENSMUSG00000054894	ProperStrand	3	chr11	62416575	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-11.4760
chr9	4299367	4302483	protein_coding	Aasdhppt	exon	ENSMUSG00000025894	ProperStrand	121	chr11	6428088	6428157	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-3.5953
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	52570390	52570407	protein_coding	Trpm4	exon	ENSMUSG00000038260	NonProperStrand	3	1	-10.7414
chr2	26494708	26494802	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	chr12	110887828	110887893	snoRNA	ENSMUSG00000084549_SNORD113	.	ENSMUSG00000084549	ProperStrand	196	1	-1.2046
chr4	123410088	123410171	Other	RMER1B	Other	chr4RMER1B123410031	NonProperStrand	1	chr2	75503502	75503592	protein_coding	Hnrnpa3	utr3	ENSMUSG00000059005	ProperStrand	289	1	-inf
chr11	83254019	83254035	protein_coding	1700020L24Rik	exon	ENSMUSG00000035085	NonProperStrand	88	chr8	73998854	73998919	protein_coding	Dda1	utr3	ENSMUSG00000074247	ProperStrand	11	2	-19.2186
chr9	15119967	15119993	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	chr11	106362341	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	2	-1.4840
chr4	122970435	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	chr14	76372346	76372426	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	1	-3.2591
chr2	180445437	180445497	protein_coding	2310003C23Rik	intron	ENSMUSG00000027573	ProperStrand	25	chr13	90238682	90238719	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	1	-10.4144
chr11	69492324	69492404	protein_coding	Senp3	exon	ENSMUSG00000005204	ProperStrand	65	chr14	60008186	60009742	protein_coding	Gm6907	exon	ENSMUSG00000091144	ProperStrand	1	1	-inf
chr18	35105640	35113883	protein_coding	Hspa9	exon	ENSMUSG00000024359	ProperStrand	166	chr10	110918549	110918639	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	8	-16.0759
chr10	122545495	122545511	SINE	B3A	B2	chr10B3A122545499	ProperStrand	1	chrX	147084049	147084066	protein_coding	Tro	exon	ENSMUSG00000025272	ProperStrand	13	1	-inf
chrX	103390004	103390094	protein_coding	Pgk1	exon	ENSMUSG00000062070	ProperStrand	484	chr2	130101972	130102052	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-1.6244
chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	chr15	79908932	79909019	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	2	-3.5384
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr9	15119646	15119736	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	4	-1.0225
chr1	184206796	184206860	protein_coding	Degs1	utr3	ENSMUSG00000038633	ProperStrand	19	chr17	24857762	24857852	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	4	-14.3323
chr8	62172308	62172398	LINE	L1_Mus4	L1	chr8L1_Mus462172221	ProperStrand	1	chr8	62172573	62172653	LTR	RMER17A2	ERVK	chr8RMER17A262172473	NonProperStrand	1	1	-inf
chr7	52382234	52382315	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	chr2	144087355	144087412	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-1.9037
chr6	37865195	37865212	protein_coding	Trim24	exon	ENSMUSG00000029833	ProperStrand	27	chr16	23110914	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.1875
chr15	79908931	79909010	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	chr15	71624758	71624797	snoRNA	ENSMUSG00000088895_SNORA81	.	ENSMUSG00000088895	ProperStrand	348	1	-2.2396
chr9	78326475	78326893	protein_coding	Eef1a1	utr3	ENSMUSG00000037742	ProperStrand	1990	chr1	162966830	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	8	-7.9736
chr7	35003327	35004105	protein_coding	Gpi1	exon	ENSMUSG00000036427	ProperStrand	288	chr4	122970400	122970480	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-4.3530
chrX	155935604	155935694	protein_coding	Mtap7d2	utr3	ENSMUSG00000041020	ProperStrand	10	chr5	74489588	74489668	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-7.3223
chr9	120038477	120038531	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	chr1	187066849	187066918	snoRNA	ENSMUSG00000077571_Snora36b	.	ENSMUSG00000077571	ProperStrand	244	4	-4.2222
chr2	129998671	129998713	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr1	123401462	123401479	protein_coding	Ccdc93	utr3	ENSMUSG00000026339	ProperStrand	14	1	-11.0650
chr13	3210142	3210222	LINE	L1Md_F2	L1	chr13L1Md_F23204641	NonProperStrand	1	chr6	130829482	130829572	LINE	L1Md_F	L1	chr6L1Md_F130827837	NonProperStrand	1	1	-inf
chr1	177622597	177622614	protein_coding	Opn3	exon	ENSMUSG00000026525	ProperStrand	31	chr5	74489543	74489680	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	2	-8.3331
chr17	24858602	24858636	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr18	35102297	35102349	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-3.1053
chr2	90235286	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	31093938	31093956	protein_coding	Dpysl5	exon	ENSMUSG00000029168	NonProperStrand	38	2	-8.7876
chr6	108566759	108566821	lincRNA	0610040F04Rik	intron	ENSMUSG00000087341	ProperStrand	13	chr5	74489218	74489318	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	1	-8.6980
chr9	64981512	64981529	protein_coding	Igdcc4	exon	ENSMUSG00000032816	NonProperStrand	36	chr12	112779225	112779285	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-5.7728
chr18	10052130	10052151	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr2	112202959	112202975	protein_coding	Slc12a6	utr3	ENSMUSG00000027130	NonProperStrand	72	1	-8.4358
chr11	113423607	113423624	protein_coding	Slc39a11	intron	ENSMUSG00000041654	NonProperStrand	39	chr4	131865866	131865964	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.4732
chr14	25274099	25274158	protein_coding	Polr3a	exon	ENSMUSG00000025280	ProperStrand	11	chr12	56921934	56921952	pseudogene	Gm9812	.	ENSMUSG00000046747	ProperStrand	2	1	-inf
chr7	107434195	107434212	protein_coding	P4ha3	utr5	ENSMUSG00000051048	ProperStrand	7	chr17	24665420	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-9.3014
chr11	6428029	6428129	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr14	96988123	96988178	snoRNA	ENSMUSG00000064581_SNORA30	.	ENSMUSG00000064581	ProperStrand	146	1	-1.6959
chr3	123446220	123446271	snRNA	ENSMUSG00000065132_U6	.	ENSMUSG00000065132	ProperStrand	1	chr7	29136527	29136617	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-inf
chr8	73122106	73122454	protein_coding	Ssbp4	exon	ENSMUSG00000070003	ProperStrand	39	chr8	72656420	72656520	protein_coding	Nr2c2ap	intron	ENSMUSG00000071078	ProperStrand	9	8	-19.6870
chr17	46154366	46154458	protein_coding	Vegfa	utr3	ENSMUSG00000023951	ProperStrand	43	chrX	34622906	34622923	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	4	-12.5039
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr8	113576018	113576069	protein_coding	Aars	intron	ENSMUSG00000031960	ProperStrand	355	3	-11.3768
chr11	98693757	98693774	protein_coding	Casc3	utr3	ENSMUSG00000078676	NonProperStrand	4	chr16	23110828	23110878	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	NonProperStrand	93	1	-17.9098
chr15	88693686	88693766	protein_coding	Pim3	exon	ENSMUSG00000035828	ProperStrand	66	chr4	131865856	131865987	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-6.5721
chr19	10696951	10697882	protein_coding	Ddb1	exon	ENSMUSG00000024740	ProperStrand	304	chr8	24169016	24169033	protein_coding	Ank1	utr5	ENSMUSG00000031543	ProperStrand	47	3	-inf
chr1	74149066	74149144	protein_coding	Tns1	intron	ENSMUSG00000055322	ProperStrand	63	chr4	131865932	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	5	-8.9112
chr11	116535923	116535982	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr17	25080393	25080493	protein_coding	Hn1l	utr3	ENSMUSG00000024165	ProperStrand	45	1	-6.4791
chr19	46731003	46731093	protein_coding	D19Wsu162e	utr3	ENSMUSG00000047731	ProperStrand	16	chr18	74938059	74938139	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	ProperStrand	1022	1	-10.3242
chr7	112782969	112782985	protein_coding	Arfip2	utr3	ENSMUSG00000030881	ProperStrand	191	chr4	130305550	130305620	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	1	-7.5968
chr11	62772269	62772289	protein_coding	Cdrt4	intron	ENSMUSG00000042200	ProperStrand	2	chr13	49779667	49779716	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-14.4661
chr14	32479927	32479943	protein_coding	Btd	exon	ENSMUSG00000021900	NonProperStrand	74	chr12	88778723	88778767	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-6.0838
chr5	34234246	34234262	protein_coding	Whsc1	utr5	ENSMUSG00000057406	ProperStrand	409	chr18	33954827	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	3	-2.1705
chr7	80501455	80501472	lincRNA	A730056A06Rik	intron	ENSMUSG00000092033	ProperStrand	12	chr4	131399490	131399506	protein_coding	Mecr	exon	ENSMUSG00000028910	NonProperStrand	109	1	-15.4008
chr9	78023109	78023149	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr5	104240110	104244035	protein_coding	Aff1	exon	ENSMUSG00000029313	ProperStrand	82	1	-5.2673
chr10	115874668	115874685	protein_coding	Kcnmb4	intron	ENSMUSG00000054934	NonProperStrand	11	chr7	117189863	117189943	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-9.6452
chr9	15120972	15121072	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	chr2	138109276	138109350	protein_coding	Btbd3	exon	ENSMUSG00000062098	ProperStrand	16	1	-12.3924
chr7	57041565	57041581	protein_coding	Prmt3	exon	ENSMUSG00000030505	ProperStrand	89	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-8.5796
chr3	88716663	88716832	protein_coding	Msto1	exon	ENSMUSG00000068922	ProperStrand	36	chr16	23111389	23111469	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-7.8267
chr11	32500864	32503675	protein_coding	Stk10	exon	ENSMUSG00000020272	NonProperStrand	73	chr1	172581034	172581056	protein_coding	Olfml2b	intron	ENSMUSG00000038463	ProperStrand	57	1	-13.0233
chrX	155823889	155823920	protein_coding	Eif1ax	utr3	ENSMUSG00000067194	ProperStrand	18	chr1	162967515	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-5.7965
chr5	122261826	122261848	protein_coding-noncoding	Atxn2	utr5	ENSMUSG00000042605	ProperStrand	1	chr18	33954826	33954946	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-inf
chr2	103592750	103592777	protein_coding	Nat10	exon	ENSMUSG00000027185	ProperStrand	124	chr6	115757992	115758117	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-4.0784
chr13	55449324	55449404	protein_coding	Lman2	intron	ENSMUSG00000021484	ProperStrand	26	chr3	146093926	146094016	protein_coding	Ssx2ip	exon	ENSMUSG00000036825	ProperStrand	19	1	-17.3157
chr9	118809731	118809747	protein_coding	Itga9	utr3	ENSMUSG00000039115	ProperStrand	27	chr14	31827478	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-8.5462
chr11	60530171	60530188	protein_coding	Flii	exon	ENSMUSG00000002812	ProperStrand	42	chr5	97427060	97427076	protein_coding	Bmp2k	exon	ENSMUSG00000034663	NonProperStrand	7	1	-18.3863
chr17	39979983	39980073	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	2	-3.6113
chr12	27874148	27874164	LTR	ORR1E	MaLR	chr12ORR1E27874117	NonProperStrand	27	chr7	13516174	13516193	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	1	-10.2774
chr4	131908368	131908821	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	chr7	86611343	86611379	tRNA	tRNA387-ArgTCG	.	630202	ProperStrand	77	1	-1.0780
chr19	43891398	43891414	protein_coding	Abcc2	exon	ENSMUSG00000025194	NonProperStrand	3	chr10	6450631	6450649	protein_coding	Plekhg1	intron	ENSMUSG00000040624	NonProperStrand	75	1	-20.1638
chr5	123622050	123622066	protein_coding	Hpd	exon	ENSMUSG00000029445	ProperStrand	254	chr11	106362556	106362636	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-4.5817
chr1	168239525	168239541	protein_coding	Ildr2	exon	ENSMUSG00000040612	ProperStrand	103	chr12	17553032	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	2	-6.8020
chr13	111188892	111188992	protein_coding	Plk2	exon	ENSMUSG00000021701	ProperStrand	14	chr11	62416991	62417021	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	2	-14.3332
chr6	122678164	122678224	protein_coding	Slc2a3	utr3	ENSMUSG00000003153	ProperStrand	682	chr5	42189293	42191164	protein_coding	Bod1l	exon	ENSMUSG00000061755	ProperStrand	43	1	-9.1201
chr6	90975222	90975248	protein_coding	Nup210	exon	ENSMUSG00000030091	ProperStrand	140	chr9	15118334	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-3.6074
chr9	114421709	114421809	protein_coding	Trim71	utr3	ENSMUSG00000079259	ProperStrand	162	chr3	153573528	153573571	snoRNA	ENSMUSG00000064731_Snord45b	.	ENSMUSG00000064731	ProperStrand	205	1	-8.8590
chr19	41841316	41841406	protein_coding	Arhgap19	utr3	ENSMUSG00000025154	ProperStrand	34	chr7	148634731	148634812	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-5.0758
chrX	50280302	50280341	protein_coding	Phf6	intron	ENSMUSG00000025626	ProperStrand	7	chr1	89673687	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-7.5185
chr9	107158592	107158609	protein_coding	Mapkapk3	exon	ENSMUSG00000032577	ProperStrand	16	chr16	23110940	23110966	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.9771
chr1	141367142	141377703	protein_coding	Aspm	exon	ENSMUSG00000033952	ProperStrand	64	chr4	131908236	131908453	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-4.0069
chr17	45705021	45705069	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr13	23855906	23855987	protein_coding	Hist1h1a	exon	ENSMUSG00000049539	ProperStrand	34	1	-7.8646
chr8	90782153	90782190	protein_coding	Papd5	utr3	ENSMUSG00000036779	ProperStrand	32	chr3	88497925	88497980	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-8.7214
chr10	40021196	40021226	protein_coding	Amd1	intron	ENSMUSG00000075232	ProperStrand	21	chr16	23110918	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-4.6345
chr4	43505657	43505719	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr1	178754159	178754175	protein_coding	Sdccag8	intron	ENSMUSG00000026504	ProperStrand	54	1	-3.2606
chr10	87892265	87892281	protein_coding	Gnptab	exon	ENSMUSG00000035311	ProperStrand	65	chr12	106269282	106269335	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-3.9894
chr9	40609428	40610019	protein_coding	Hspa8	utr5	ENSMUSG00000015656	ProperStrand	798	chr2	30675197	30675213	protein_coding	Mettl11a	exon	ENSMUSG00000026857	ProperStrand	51	2	-13.4769
chr2	144215039	144219049	protein_coding	Csrp2bp	exon	ENSMUSG00000027425	ProperStrand	32	chr16	23110539	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	4	-12.0510
chr12	3968611	3968627	protein_coding	Efr3b	exon	ENSMUSG00000020658	ProperStrand	142	chr19	60832438	60832454	protein_coding	Nanos1	exon	ENSMUSG00000072437	NonProperStrand	3	1	-18.3547
chrX	72214248	72214264	protein_coding-noncoding	Gab3	utr3	ENSMUSG00000032750	ProperStrand	420	chr19	41330798	41330815	protein_coding	Tm9sf3	exon	ENSMUSG00000025016	ProperStrand	21	1	-11.5421
chr16	97965556	97965622	protein_coding	Ripk4	exon	ENSMUSG00000005251	ProperStrand	28	chr7	116664794	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	10	-19.7942
chr15	79362356	79362446	protein_coding	Ddx17	intron	ENSMUSG00000055065	ProperStrand	140	chr11	97642997	97643077	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.1681
chr11	14047507	14047524	lincRNA	4930554G24Rik	exon	ENSMUSG00000085452	ProperStrand	23	chr5	108334195	108334254	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-6.7107
chr17	24814828	24814844	protein_coding	Zfp598	exon	ENSMUSG00000041130	ProperStrand	26	chr11	106362640	106362672	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	2	-14.4350
chr15	76736352	76736565	protein_coding	Rpl8	exon	ENSMUSG00000003970	ProperStrand	191	chr4	122968586	122968676	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-4.0440
chr9	64024764	64024827	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	chr9	15119360	15119428	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-1.1237
chr14	124243064	124243085	protein_coding	Itgbl1	exon	ENSMUSG00000032925	ProperStrand	159	chr17	23955819	23955838	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	1	-9.5199
chr10	7383389	7383405	protein_coding	Pcmt1	utr5	ENSMUSG00000019795	ProperStrand	55	chr15	99611594	99611639	protein_coding	Lima1	exon	ENSMUSG00000023022	ProperStrand	159	1	-11.5325
chr7	29171541	29171558	protein_coding	Med29	utr3	ENSMUSG00000003444	NonProperStrand	134	chrX	34622931	34622958	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-3.3077
chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	chr16	43886838	43886928	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	1	-0.8171
chr17	45705026	45705054	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr8	46467369	46467386	protein_coding	Fam149a	utr5	ENSMUSG00000070044	NonProperStrand	12	1	-9.9925
chr13	37997472	37997547	protein_coding	Rreb1	intron	ENSMUSG00000039087	ProperStrand	33	chr11	69481341	69481431	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-4.3164
chr5	140302175	140302226	protein_coding	Psmg3	exon	ENSMUSG00000029551	ProperStrand	5	chr14	33005143	33005233	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	4	-19.0592
chr16	57391758	57391792	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr11	118474719	118474737	protein_coding	Rbfox3	intron	ENSMUSG00000025576	ProperStrand	19	1	-10.1169
chr7	53089954	53089975	protein_coding	Grin2d	intron	ENSMUSG00000002771	NonProperStrand	31	chr7	117190023	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-7.6262
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr8	63789397	63789413	protein_coding	Sh3rf1	intron	ENSMUSG00000031642	ProperStrand	50	1	-8.9589
chr17	13117218	13117269	protein_coding	Tcp1	exon	ENSMUSG00000068039	ProperStrand	116	chr2	26768397	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-4.3299
chr16	45758254	45758270	protein_coding	Phldb2	exon	ENSMUSG00000033149	ProperStrand	9	chr5	108336363	108336464	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-8.7031
chr6	50299740	50299757	protein_coding	Osbpl3	intron	ENSMUSG00000029822	ProperStrand	34	chr11	55296275	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-7.3099
chr17	57396234	57396251	protein_coding	Trip10	intron	ENSMUSG00000019487	NonProperStrand	4	chr11	106362655	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-13.0688
chr11	98860578	98860599	protein_coding	Top2a	exon	ENSMUSG00000020914	ProperStrand	324	chr6	136758178	136758195	protein_coding	H2afj	utr3	ENSMUSG00000060032	ProperStrand	25	1	-11.7052
chr7	4745112	4745212	protein_coding	Rpl28	exon	ENSMUSG00000030432	ProperStrand	220	chr7	117190025	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	15	-inf
chr2	84532154	84532506	protein_coding	Zdhhc5	exon	ENSMUSG00000034075	ProperStrand	20	chr5	74489583	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-5.9076
chr10	16844327	16844346	LINE	L1_Mur1	L1	chr10L1_Mur116843303	ProperStrand	76	chr2	130101983	130102087	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	3	-11.5737
chr1	91040229	91040329	protein_coding	Sh3bp4	exon	ENSMUSG00000036206	ProperStrand	20	chr11	106874197	106874267	tRNA	tRNA945-ArgCCG	.	1590882	ProperStrand	133	1	-13.9437
chr11	55309697	55311192	protein_coding	G3bp1	exon	ENSMUSG00000018583	ProperStrand	106	chr5	108334238	108336486	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-3.7418
chr9	66255883	66255899	protein_coding	Herc1	exon	ENSMUSG00000038664	NonProperStrand	35	chr4	25554880	25554901	protein_coding	Fut9	intron	ENSMUSG00000055373	ProperStrand	10	1	-18.0352
chr10	79589006	79589034	protein_coding	Stk11	exon	ENSMUSG00000003068	ProperStrand	24	chr4	8793040	8793108	protein_coding	Chd7	exon	ENSMUSG00000041235	ProperStrand	80	1	-14.5825
chr2	73270299	73270316	protein_coding	Wipf1	utr3	ENSMUSG00000075284	ProperStrand	6	chr1	162965978	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-13.3910
chr4	81748400	81748420	lincRNA	Gm5860	exon	ENSMUSG00000085022	ProperStrand	9	chr9	64022894	64022944	protein_coding	Rpl4	intron	ENSMUSG00000032399	ProperStrand	608	1	-12.5634
chr17	31640574	31640590	protein_coding	Wdr4	exon	ENSMUSG00000024037	NonProperStrand	18	chr9	117080240	117080256	protein_coding	Rbms3	intron	ENSMUSG00000039607	NonProperStrand	54	1	-15.9655
chr7	39056044	39056066	protein_coding	Pop4	intron	ENSMUSG00000030423	ProperStrand	4	chr7	116663637	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-13.1590
chr14	20630795	20630891	protein_coding	Nid2	utr3	ENSMUSG00000021806	ProperStrand	372	chr4	137762046	137762062	protein_coding	Eif4g3	exon	ENSMUSG00000028760	ProperStrand	42	1	-10.3767
chr6	47882414	47882430	protein_coding	Zfp212	utr3	ENSMUSG00000052763	ProperStrand	20	chr17	13112514	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	4	-19.5077
chr7	73923301	73923320	protein_coding	Lass3	intron	ENSMUSG00000030510	ProperStrand	4	chr2	130102000	130102082	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-10.9807
chr6	115754804	115754821	protein_coding	Cand2	utr3	ENSMUSG00000030319	ProperStrand	40	chr16	23111382	23111449	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.8604
chr11	23794837	23794854	antisense	Gm12061	.	ENSMUSG00000084769	ProperStrand	18	chr2	41199971	41199989	protein_coding	Lrp1b	exon	ENSMUSG00000049252	ProperStrand	376	1	-12.0793
chr9	64026156	64026256	protein_coding	Rpl4	utr3	ENSMUSG00000032399	ProperStrand	608	chr11	62416635	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-1.1629
chr15	79360460	79360560	protein_coding	Ddx17	exon	ENSMUSG00000055065	ProperStrand	140	chr16	23110532	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.1602
chr19	7131603	7139958	protein_coding	Macrod1	exon	ENSMUSG00000036278	ProperStrand	9	chr10	127565029	127565129	protein_coding	Baz2a	utr3	ENSMUSG00000040054	ProperStrand	274	1	-14.1594
chr5	8964350	8964430	LINE	L1MA6	L1	chr5L1MA68964266	ProperStrand	1	chr5	8963786	8963876	LTR	RMER15	ERVL	chr5RMER158963703	NonProperStrand	1	1	-inf
chrX	12738577	12738645	protein_coding	Usp9x	exon	ENSMUSG00000031010	ProperStrand	174	chr5	34234244	34234262	protein_coding	Whsc1	utr5	ENSMUSG00000057406	ProperStrand	409	3	-16.5001
chr11	30035988	30036034	protein_coding	Spnb2	exon	ENSMUSG00000020315	ProperStrand	103	chr7	117189990	117190059	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.3815
chr13	12292498	12292582	protein_coding	Mtr	exon	ENSMUSG00000021311	ProperStrand	22	chr8	113366286	113366353	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	2	-17.7197
chr17	34069111	34069127	protein_coding	Rgl2	exon	ENSMUSG00000041354	NonProperStrand	5	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-13.3184
chr12	80276976	80276993	protein_coding	Rdh11	utr3	ENSMUSG00000066441	NonProperStrand	23	chr16	23110894	23110940	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.7108
chr5	50393256	50398001	protein_coding	Gpr125	exon	ENSMUSG00000029090	NonProperStrand	25	chr11	106362637	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-9.1656
chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	chr17	35299564	35299640	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-2.2102
chr5	122916850	122917718	protein_coding	Atp2a2	exon	ENSMUSG00000029467	ProperStrand	166	chr4	131908810	131908865	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-1.7067
chr14	71295884	71301302	protein_coding	Gfra2	exon	ENSMUSG00000022103	ProperStrand	26	chr7	38468013	38468033	protein_coding	Zfp536	intron	ENSMUSG00000043456	ProperStrand	57	1	-15.1072
chr11	99076441	99076531	protein_coding	Smarce1	exon	ENSMUSG00000037935	ProperStrand	38	chr18	33954820	33954900	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-4.3641
chr11	99194952	99194968	protein_coding	Krt26	exon	ENSMUSG00000075570	ProperStrand	8	chr9	120039624	120039669	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-7.2948
chr12	113955302	113955402	LTR	MTE-int	MaLR	chr12MTE-int113955166	NonProperStrand	1	chr16	23111772	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-inf
chr5	89383967	89457318	protein_coding	Slc4a4	exon	ENSMUSG00000060961	NonProperStrand	195	chr19	8800084	8800140	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-5.2869
chr9	78023109	78023144	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr14	35539106	35539164	protein_coding	Wapal	exon	ENSMUSG00000041408	ProperStrand	93	1	-5.0234
chr8	98269959	98270083	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	chr7	67123692	67123759	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	2	-3.7486
chr11	6519871	6519944	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	chr1	63225690	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-1.7340
chr2	25854260	25863364	protein_coding	Ubac1	exon	ENSMUSG00000036352	ProperStrand	25	chr16	23110962	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-4.0159
chr17	28031679	28031706	protein_coding	Uhrf1bp1	exon	ENSMUSG00000039512	ProperStrand	79	chr4	131826038	131826128	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	3	-19.5491
chr5	136451719	136451736	SINE	B3A	B2	chr5B3A136451702	NonProperStrand	23	chr5	33361710	33361774	protein_coding	Ywhah	utr5	ENSMUSG00000018965	ProperStrand	81	1	-14.6432
chr17	24856728	24856778	antisense	Snhg9	.	ENSMUSG00000090101	ProperStrand	218	chr12	35015748	35015765	protein_coding	Hdac9	intron	ENSMUSG00000004698	ProperStrand	41	1	-11.4942
chr2	95013420	95013510	LTR	MTB	MaLR	chr2MTB95013440	NonProperStrand	1	chr2	95013164	95013254	LTR	RMER19B	ERVK	chr2RMER19B95012976	ProperStrand	1	1	-inf
chr15	84101747	84103941	protein_coding	Parvb	exon	ENSMUSG00000022438	ProperStrand	127	chr15	79908929	79908956	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-4.0341
chr7	19935606	19936050	protein_coding	Ercc1	exon	ENSMUSG00000003549	NonProperStrand	35	chr17	27699643	27699664	protein_coding	Hmga1	utr3	ENSMUSG00000046711	ProperStrand	180	1	-12.1981
chr6	24684480	24684497	protein_coding	Hyal6	exon	ENSMUSG00000029679	NonProperStrand	114	chr8	73223405	73223511	protein_coding	Jund	exon	ENSMUSG00000071076	ProperStrand	50	1	-12.3913
chr15	12784627	12784687	protein_coding	Drosha	intron	ENSMUSG00000022191	ProperStrand	163	chr4	117156969	117156987	protein_coding	Rnf220	intron	ENSMUSG00000028677	ProperStrand	131	1	-9.7410
chr11	113523870	113523887	protein_coding	Cog1	utr3	ENSMUSG00000018661	ProperStrand	51	chr11	98878375	98878466	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-6.6064
chr19	36909029	36909098	protein_coding	Tnks2	exon	ENSMUSG00000024811	ProperStrand	133	chr4	131866155	131866245	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	4	-8.3147
chr1	168467514	168467604	LINE	L1Md_F3	L1	chr1L1Md_F3168465538	NonProperStrand	1	chr1	168464530	168464620	LINE	L1_Mm	L1	chr1L1_Mm168464309	ProperStrand	1	1	-inf
chr11	6498122	6498279	protein_coding	Nacad	exon	ENSMUSG00000041073	ProperStrand	3	chr11	87240282	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	1	-17.4178
chrX	7720824	7721010	protein_coding	Rbm3	exon	ENSMUSG00000031167	ProperStrand	17	chr5	130300460	130300540	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.8548
chr7	133263924	133267937	protein_coding	Xpo6	exon	ENSMUSG00000000131	ProperStrand	36	chr3	89254155	89254185	protein_coding	Pbxip1	utr3	ENSMUSG00000042613	ProperStrand	16	4	-inf
chr1	162965948	162966048	non_coding	Gas5	.	ENSMUSG00000053332	ProperStrand	144	chr7	29136613	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.0492
chr14	56159294	56159311	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	chr9	120037912	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-2.5358
chr18	35395329	35414319	protein_coding	Ctnna1	exon	ENSMUSG00000037815	ProperStrand	115	chr4	131908691	131908899	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-1.0707
chr12	86104531	86104610	protein_coding	Npc2	intron	ENSMUSG00000021242	ProperStrand	29	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0921
chr11	87240282	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	chr7	148634780	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-1.9502
chr3	157653554	157653570	protein_coding	Ankrd13c	intron	ENSMUSG00000039988	NonProperStrand	7	chr13	96102585	96102636	snoRNA	ENSMUSG00000077380_SNORA68	.	ENSMUSG00000077380	ProperStrand	51	1	-18.0807
chr5	124953657	124964532	protein_coding	Rilpl1	exon	ENSMUSG00000029392	ProperStrand	10	chr7	116663710	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-5.9268
chr14	24954494	24954560	protein_coding	Dlg5	utr3	ENSMUSG00000021782	ProperStrand	46	chr5	130300482	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.9749
chr1	133141328	133141345	protein_coding	Rassf5	exon	ENSMUSG00000026430	ProperStrand	73	chr4	116826699	116826753	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-6.3932
chr11	50196561	50196733	protein_coding	Hnrnph1	exon	ENSMUSG00000007850	ProperStrand	49	chr7	133991456	133991472	protein_coding	Doc2a	utr5	ENSMUSG00000052301	NonProperStrand	4	1	-20.7434
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr15	58577335	58577351	protein_coding	Fer1l6	intron	ENSMUSG00000037106	ProperStrand	54	1	-8.8043
chr2	98506590	98506670	Satellite	SYNREP_MM	Satellite	chr2SYNREP_MM98506361	ProperStrand	2	chr6	103599188	103599278	protein_coding	Chl1	intron	ENSMUSG00000030077	NonProperStrand	4	1	-inf
chr4	25034478	25034558	processed_transcript	Gm11906	.	ENSMUSG00000085885	NonProperStrand	5	chr4	24832019	24832109	protein_coding	Ndufaf4	utr3	ENSMUSG00000028261	ProperStrand	5	1	-19.0779
chr4	138948712	138948772	protein_coding	Ubr4	exon	ENSMUSG00000066036	ProperStrand	304	chr4	3762227	3762292	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	1	-6.2635
chr2	80297373	80297389	LINE	L1MB8	L1	chr2L1MB880297262	ProperStrand	53	chr11	6428131	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.4183
chr10	86156131	86156163	protein_coding	Hsp90b1	exon	ENSMUSG00000020048	ProperStrand	396	chr13	94957641	94957657	protein_coding	Lhfpl2	intron	ENSMUSG00000045312	ProperStrand	37	1	-10.5079
chr2	154348388	154348418	protein_coding	Cbfa2t2	intron	ENSMUSG00000038533	ProperStrand	99	chr9	120038477	120038528	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.1764
chr18	12411898	12411978	protein_coding	Ankrd29	utr3	ENSMUSG00000057766	ProperStrand	4	chr7	134671428	134671518	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-13.5395
chr11	113523872	113523889	protein_coding	Cog1	utr3	ENSMUSG00000018661	ProperStrand	51	chr1	162966817	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-6.5806
chrX	96992719	96992736	pseudogene	Pcna-ps1	.	ENSMUSG00000083682	ProperStrand	6	chr3	108357258	108357330	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-9.2183
chr16	57391758	57391792	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr13	51743581	51743703	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	6	-11.2831
chr18	63109676	63109692	protein_coding	Apcdd1	exon	ENSMUSG00000071847	NonProperStrand	254	chr18	73693112	73693138	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-2.8212
chr5	125083493	125083513	protein_coding	Atp6v0a2	exon	ENSMUSG00000038023	ProperStrand	31	chr7	117166723	117166858	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	3	-14.1026
chr5	30387206	30387310	protein_coding	Tyms	utr3	ENSMUSG00000025747	NonProperStrand	6	chr14	34780761	34781007	protein_coding	Zfp488	utr3	ENSMUSG00000044519	NonProperStrand	39	2	-18.6919
chr15	102239581	102239680	protein_coding	Sp1	exon	ENSMUSG00000001280	ProperStrand	124	chr17	13112514	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-3.2250
chr3	73930858	73930948	LINE	Lx2B	L1	chr3Lx2B73930620	ProperStrand	1	chr3	73931098	73931178	LTR	RMER6C	ERVK	chr3RMER6C73930988	NonProperStrand	1	1	-inf
chr19	8836180	8836283	protein_coding	Nxf1	intron	ENSMUSG00000010097	ProperStrand	13	chr2	24825186	24827046	protein_coding	Wdr85	exon	ENSMUSG00000026975	ProperStrand	323	1	-13.0597
chr13	7681444	7681463	LINE	L1_Mur3	L1	chr13L1_Mur37679122	ProperStrand	9	chr5	121655016	121655125	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	9	-inf
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr1	138044191	138044208	protein_coding	Kif21b	exon	ENSMUSG00000041642	NonProperStrand	5	1	-13.7539
chr8	47619889	47619974	protein_coding	Acsl1	utr3	ENSMUSG00000018796	ProperStrand	23	chr4	131908704	131908794	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.7500
chr2	164257636	164257652	protein_coding	Sdc4	intron	ENSMUSG00000017009	ProperStrand	177	chr7	52382754	52382832	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-4.6410
chr4	128874160	128874396	protein_coding	Yars	exon	ENSMUSG00000028811	ProperStrand	131	chr16	23110455	23110566	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-3.7993
chr4	131908420	131908464	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr3	152450609	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	1	-2.9518
chr9	15069885	15069901	protein_coding	Med17	exon	ENSMUSG00000031935	ProperStrand	135	chr4	131865867	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.4463
chr15	99614046	99624905	protein_coding	Lima1	exon	ENSMUSG00000023022	ProperStrand	159	chr7	129487243	129487260	protein_coding	Prkcb	intron	ENSMUSG00000052889	ProperStrand	16	1	-14.0490
chr5	143665433	143668359	protein_coding	Actb	utr5	ENSMUSG00000029580	ProperStrand	446	chr5	23825941	23825957	protein_coding	Kcnh2	exon	ENSMUSG00000038319	ProperStrand	242	2	-10.5311
chr6	37551623	37551713	LINE	L1MCa	L1	chr6L1MCa37551603	ProperStrand	1	chr6	37551359	37551449	SINE	RSINE1	B4	chr6RSINE137551319	NonProperStrand	1	1	-inf
chr6	135871873	135871892	protein_coding	Grin2b	intron	ENSMUSG00000030209	NonProperStrand	6	chr8	32260335	32260421	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-9.3125
chr15	77605544	77605570	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr9	44107078	44107163	protein_coding	Hinfp	intron	ENSMUSG00000032119	ProperStrand	11	5	-19.5750
chrX	131224287	131224367	protein_coding	Armcx4	exon	ENSMUSG00000049804	ProperStrand	15	chr17	24857717	24857807	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.8602
chr8	111469101	111470229	protein_coding	Zfhx3	exon	ENSMUSG00000038872	ProperStrand	65	chr5	112865458	112865476	protein_coding	Sez6l	exon	ENSMUSG00000058153	ProperStrand	81	1	-12.5494
chr3	104764495	104764511	protein_coding	Wnt2b	utr5	ENSMUSG00000027840	NonProperStrand	50	chr17	35087940	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-5.5561
chr3	57262893	57262927	protein_coding	Wwtr1	exon	ENSMUSG00000027803	ProperStrand	7	chr7	116664871	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-11.0704
chr4	43505653	43505681	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr7	134179296	134179348	protein_coding	Kif22	exon	ENSMUSG00000030677	ProperStrand	63	3	-7.6333
chr16	91630367	91630463	protein_coding	Gart	exon	ENSMUSG00000022962	ProperStrand	200	chr4	151348416	151351069	protein_coding	Dnajc11	exon	ENSMUSG00000039768	NonProperStrand	16	4	-inf
chr10	79579867	79579884	protein_coding	Stk11	intron	ENSMUSG00000003068	ProperStrand	24	chr9	120038552	120038663	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	NonProperStrand	28	1	-16.6724
chr2	31888792	31888892	protein_coding	Nup214	exon	ENSMUSG00000001855	ProperStrand	62	chr18	35065769	35067270	protein_coding	Etf1	exon	ENSMUSG00000024360	NonProperStrand	4	1	-19.4015
chr7	123301039	123301075	protein_coding	Plekha7	exon	ENSMUSG00000045659	ProperStrand	66	chr9	58547119	58547136	protein_coding	2410076I21Rik	intron	ENSMUSG00000074269	ProperStrand	91	1	-12.2839
chr5	45253818	45253834	LTR	MLT1D	MaLR	chr5MLT1D45253615	ProperStrand	26	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-7.5334
chr14	48320753	48320827	protein_coding	Ktn1	exon	ENSMUSG00000021843	ProperStrand	64	chr18	35102299	35102347	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-6.4622
chr14	118883580	118883596	protein_coding	Abcc4	exon	ENSMUSG00000032849	ProperStrand	137	chr5	130300494	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.2269
chr16	90853167	90853183	protein_coding	4931408A02Rik	intron	ENSMUSG00000039903	ProperStrand	14	chr11	77995189	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-9.1169
chr12	99497602	99497618	protein_coding	Galc	utr5	ENSMUSG00000021003	NonProperStrand	65	chr8	128195710	128195768	protein_coding	4933403G14Rik	exon	ENSMUSG00000050930	ProperStrand	4	1	-18.8598
chr2	166484322	166484343	protein_coding	Prex1	intron	ENSMUSG00000039621	NonProperStrand	9	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-13.2557
chr5	143722865	143734599	protein_coding	Fscn1	exon	ENSMUSG00000029581	ProperStrand	200	chr16	23110852	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	24	-13.9313
chr19	58929372	58929389	protein_coding	Hspa12a	intron	ENSMUSG00000025092	NonProperStrand	17	chr7	119903034	119903051	protein_coding	Tead1	exon	ENSMUSG00000055320	NonProperStrand	41	1	-16.6806
chr9	59191100	59191190	protein_coding	Bbs4	intron	ENSMUSG00000025235	ProperStrand	6	chr12	88852078	88852158	protein_coding	Gm2022	intron	ENSMUSG00000071217	ProperStrand	2	1	-inf
chr2	130102056	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	chr4	56910496	56910596	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	5	-1.7163
chr6	128322002	128322018	protein_coding	Foxm1	exon	ENSMUSG00000001517	NonProperStrand	66	chr8	73419732	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.9596
chr7	4880032	4880049	protein_coding	A430110N23Rik	exon	ENSMUSG00000035279	ProperStrand	4	chr11	69483136	69483192	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-7.8378
chr13	85607864	85607964	LINE	L1Md_A	L1	chr13L1Md_A85602613	ProperStrand	1	chr9	15130707	15130779	snoRNA	ENSMUSG00000077506_Scarna9	.	ENSMUSG00000077506	ProperStrand	148	1	-inf
chr12	99497602	99497618	protein_coding	Galc	utr5	ENSMUSG00000021003	NonProperStrand	65	chr1	162967734	162967786	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	1	-10.0864
chr18	34792187	34792248	protein_coding	Kif20a	exon	ENSMUSG00000003779	ProperStrand	50	chr11	4113669	4113717	protein_coding	Tbc1d10a	exon	ENSMUSG00000034412	ProperStrand	8	3	-18.9528
chr4	155023806	155023884	protein_coding	Cdk11b	exon	ENSMUSG00000029062	ProperStrand	92	chr4	131866158	131866248	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-5.0112
chr4	3762106	3762388	protein_coding	Rps20	exon	ENSMUSG00000028234	ProperStrand	71	chr2	26768050	26768119	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	1	-8.0569
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	4	-11.4452
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	137112874	137112891	protein_coding	Rerg	intron	ENSMUSG00000030222	ProperStrand	11	1	-7.8469
chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr1	3661500	3661517	protein_coding	Xkr4	utr5	ENSMUSG00000051951	ProperStrand	59	1	-6.4875
chr16	23111687	23111834	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	chr18	35716683	35716883	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	237	-2.9621
chr3	152343934	152343952	lincRNA	AI115009	exon	ENSMUSG00000085901	NonProperStrand	1	chr14	76247752	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-inf
chr2	158182156	158182180	lincRNA	9430008C03Rik	intron	ENSMUSG00000085385	ProperStrand	1039	chr4	137120813	137120913	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	1	-2.6515
chr11	121160076	121168722	protein_coding	Foxk2	exon	ENSMUSG00000039275	ProperStrand	38	chr10	23505148	23505238	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-5.3708
chr16	13414585	13414678	protein_coding	Mkl2	utr3	ENSMUSG00000009569	ProperStrand	55	chr16	23110941	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-0.9304
chr9	106835388	106835440	protein_coding	Dock3	exon	ENSMUSG00000039716	ProperStrand	24	chr5	125884616	125884654	tRNA	tRNA1317-AlaTGC	.	1573761	ProperStrand	149	1	-13.3428
chr11	75309962	75309984	protein_coding	Prpf8	utr3	ENSMUSG00000020850	ProperStrand	255	chr6	115758042	115758118	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-2.7675
chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	chr2	127284913	127284930	protein_coding	Kcnip3	intron	ENSMUSG00000079056	ProperStrand	14	1	-13.7300
chr10	66619018	66696174	protein_coding	Jmjd1c	intron	ENSMUSG00000037876	ProperStrand	110	chr16	23111387	23111488	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-1.1893
chr3	99950382	99950420	protein_coding	Wdr3	exon	ENSMUSG00000033285	ProperStrand	30	chr1	162967515	162967571	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-7.9510
chr9	108412662	108413515	protein_coding	Qars	exon	ENSMUSG00000032604	ProperStrand	16	chr16	23111697	23111787	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.2713
chrX	11635848	11635865	protein_coding	Bcor	exon	ENSMUSG00000040363	NonProperStrand	293	chr9	15118321	15118343	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-0.9446
chr10	70691441	70696153	protein_coding	Tfam	exon	ENSMUSG00000003923	ProperStrand	13	chr6	125136555	125136600	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	1	-9.5334
chr19	4801710	4801781	protein_coding	Rbm14	exon	ENSMUSG00000006456	ProperStrand	84	chr16	23111726	23111816	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	6	-9.8670
chr17	36000485	36000501	protein_coding	Nrm	exon	ENSMUSG00000059791	ProperStrand	253	chr19	9043854	9043928	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	1	-6.6003
chr2	91388930	91388956	protein_coding	Ckap5	exon	ENSMUSG00000040549	ProperStrand	53	chr16	23111694	23111784	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.1031
chr2	153050783	153050799	protein_coding	Tspyl3	exon	ENSMUSG00000074671	ProperStrand	228	chr4	132394333	132394463	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	1	-6.4829
chr7	138055759	138055849	protein_coding	Plekha1	utr3	ENSMUSG00000040268	ProperStrand	15	chr11	69481376	69481456	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.8683
chr3	87784035	87784135	protein_coding	Nes	utr3	ENSMUSG00000004891	ProperStrand	3	chr9	120038613	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-9.2011
chr19	53082307	53082324	protein_coding	Xpnpep1	intron	ENSMUSG00000025027	NonProperStrand	58	chr5	108336377	108336411	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-4.9465
chr3	85942713	85942773	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	chr10	90581241	90581270	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-1.6363
chr10	128257530	128257546	protein_coding	Ormdl2	utr5	ENSMUSG00000025353	ProperStrand	51	chr19	8799581	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-7.0898
chr10	58579395	58579414	protein_coding	Sh3rf3	intron	ENSMUSG00000037990	NonProperStrand	9	chr16	23110891	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-8.1007
chr15	99424741	99424841	protein_coding	Aqp5	utr3	ENSMUSG00000044217	ProperStrand	2	chr9	15119722	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-9.8289
chr15	75454213	75454322	protein_coding	Zfp41	utr3	ENSMUSG00000047003	ProperStrand	9	chr18	35716854	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-13.7700
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chrX	72214248	72214264	protein_coding-noncoding	Gab3	utr3	ENSMUSG00000032750	ProperStrand	420	2	-4.0711
chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	chr7	105241577	105241642	protein_coding	Myo7a	intron	ENSMUSG00000030761	NonProperStrand	33	1	-10.2699
chr5	131915722	131915742	protein_coding	Auts2	exon	ENSMUSG00000029673	ProperStrand	71	chr7	148634747	148634799	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-3.6717
chr17	12456787	12456887	protein_coding	Map3k4	exon	ENSMUSG00000014426	ProperStrand	36	chr19	8963027	8963085	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.1678
chr13	30338190	30338207	protein_coding	Mboat1	utr3	ENSMUSG00000038732	NonProperStrand	148	chr3	123210853	123210953	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-0.7988
chr17	24665419	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	chr8	73419655	73419786	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	32	-3.8149
chr18	21054478	21054494	protein_coding	Trappc8	exon	ENSMUSG00000033382	ProperStrand	43	chr5	130295413	130295475	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-5.9014
chr15	82980082	82980191	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr2	166890558	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-1.8027
chr13	74494656	74494673	protein_coding	Ccdc127	utr3	ENSMUSG00000021578	NonProperStrand	54	chr1	82679326	82679342	protein_coding	Col4a3	exon	ENSMUSG00000079465	ProperStrand	99	1	-12.5202
chr3	38348912	38348948	protein_coding	Ankrd50	utr3	ENSMUSG00000044864	ProperStrand	36	chr16	23111386	23111476	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.0295
chr2	11222402	11222419	protein_coding	Prkcq	utr3	ENSMUSG00000026778	NonProperStrand	6	chr4	116828379	116828432	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-13.1394
chr7	36561310	36561528	protein_coding	Zfp507	exon	ENSMUSG00000044452	ProperStrand	66	chr1	162966813	162966845	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	9	-19.4602
chr3	35738029	35738051	protein_coding	Atp11b	exon	ENSMUSG00000037400	ProperStrand	39	chr11	97642950	97643072	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.2331
mmu-miR-351-3p	0	18	miRNA	mmu-miR-351-3p	.	mmu-miR-351-3p	NonProperStrand	1	chr19	8963112	8963165	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-inf
chr5	65952377	65952395	protein_coding	Ube2k	intron	ENSMUSG00000029203	ProperStrand	289	chr18	35714187	35714253	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-0.9455
chr7	52713969	52714554	protein_coding	Ftl1	exon	ENSMUSG00000050708	ProperStrand	807	chr1	162965992	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	3	-0.7998
chr16	23108943	23109024	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr1	162968475	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	3	-5.7178
chr8	26879777	26879793	protein_coding	Gm17484	utr3	ENSMUSG00000091514	ProperStrand	68	chr2	144087420	144087448	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-6.2980
chr15	81625960	81626001	protein_coding	Zc3h7b	utr3	ENSMUSG00000022390	ProperStrand	35	chr19	8799833	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	2	-9.7818
chr15	29471226	29471243	LINE	Lx4B	L1	chr15Lx4B29471206	ProperStrand	16	chr4	131865855	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.1079
chr5	33369256	33369289	protein_coding	Ywhah	exon	ENSMUSG00000018965	ProperStrand	81	chr14	61648824	61648841	protein_coding	Tnfrsf19	intron	ENSMUSG00000060548	ProperStrand	34	1	-13.8569
chr4	106236961	106237061	protein_coding	Dhcr24	intron	ENSMUSG00000034926	ProperStrand	94	chr14	56159295	56159311	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	4	-19.8313
chr18	56890761	56892888	protein_coding	Lmnb1	exon	ENSMUSG00000024590	ProperStrand	176	chr5	111121060	111121150	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	7	-inf
chr2	104665347	104665396	SINE	B3	B2	chr2B3104665315	ProperStrand	1	chr8	125418803	125418819	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	1	-inf
chr17	72007985	72008002	protein_coding	Wdr43	utr3	ENSMUSG00000041057	ProperStrand	70	chr17	35299513	35299613	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-4.4815
chr2	90235286	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	127152705	127152721	protein_coding	Myo1a	exon	ENSMUSG00000025401	ProperStrand	93	1	-3.6383
chr3	157662672	157664082	protein_coding	Ankrd13c	exon	ENSMUSG00000039988	ProperStrand	14	chr9	120038562	120038652	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.8314
chrX	34390976	34391000	protein_coding	C330007P06Rik	utr3	ENSMUSG00000006423	ProperStrand	3	chr3	144733677	144733693	protein_coding	Clca5	utr3	ENSMUSG00000036960	NonProperStrand	8	1	-20.4785
chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	chrX	12264320	12266463	protein_coding	Med14	exon	ENSMUSG00000064127	NonProperStrand	22	1	-9.0007
chr11	50016000	50016319	protein_coding	Sqstm1	exon	ENSMUSG00000015837	ProperStrand	36	chr16	23110539	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.3689
chr12	85655189	85655205	protein_coding	Ptgr2	utr3	ENSMUSG00000072946	ProperStrand	5	chr1	162965531	162965584	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-8.2678
chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr7	150717297	150717425	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	28	-6.6291
chr17	35055245	35055416	protein_coding	Slc44a4	exon	ENSMUSG00000007034	ProperStrand	5	chr1	63225621	63225701	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-11.8128
chr9	44156098	44156114	SINE	B1_Mur1	Alu	chr9B1_Mur144156006	ProperStrand	1	mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	1	-inf
chr4	104904471	104904555	protein_coding	Ppap2b	utr3	ENSMUSG00000028517	ProperStrand	8	chr12	17552951	17553029	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-9.1689
chr11	69224464	69224480	protein_coding	Kdm6b	intron	ENSMUSG00000018476	ProperStrand	76	chr2	91613185	91613203	protein_coding	Ambra1	exon	ENSMUSG00000040506	ProperStrand	65	1	-12.6778
chr8	73032166	73032195	protein_coding	Uba52	utr3	ENSMUSG00000090137	ProperStrand	37	chr16	23111760	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.7135
chr19	3276893	3279581	protein_coding	Ighmbp2	exon	ENSMUSG00000024831	ProperStrand	4	chr7	150253624	150253682	protein_coding	Cd81	utr3	ENSMUSG00000037706	ProperStrand	88	1	-17.9349
chr19	10614181	10614197	protein_coding	Cpsf7	exon	ENSMUSG00000034820	ProperStrand	66	chr1	89673742	89673765	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-3.0912
chr18	35098003	35098293	protein_coding	Hspa9	exon	ENSMUSG00000024359	ProperStrand	166	chr2	26493366	26493384	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	3	-5.4133
chr4	133403989	133404005	protein_coding	Rps6ka1	exon	ENSMUSG00000003644	ProperStrand	68	chr2	153171922	153172011	protein_coding	Asxl1	utr5	ENSMUSG00000042548	ProperStrand	76	1	-12.5869
chr4	148647925	148649058	protein_coding	Kif1b	exon	ENSMUSG00000063077	ProperStrand	60	chr13	96100558	96100648	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	3	-17.8852
chr13	51745077	51745791	protein_coding	Cks2	utr3	ENSMUSG00000062248	ProperStrand	26	chr5	121655051	121655131	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.3544
chr18	37456851	37456868	protein_coding	Pcdhb2	exon	ENSMUSG00000051599	ProperStrand	7	chr1	9932548	9932605	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-12.1456
chr19	46110825	46113575	protein_coding	Ldb1	utr5	ENSMUSG00000025223	ProperStrand	42	chr3	127248967	127248985	protein_coding	Larp7	exon	ENSMUSG00000027968	ProperStrand	3	1	-inf
chr4	116827094	116827163	protein_coding-noncoding	Rps8	utr3	ENSMUSG00000047675	ProperStrand	14	chr4	116827169	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-9.9864
chr6	120355043	120355105	protein_coding	Kdm5a	exon	ENSMUSG00000030180	ProperStrand	57	chr3	153575089	153575107	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	2	-13.6703
chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	chr6	142977689	142977714	protein_coding	5730419I09Rik	exon	ENSMUSG00000030279	ProperStrand	81	1	-8.8434
chr14	118998604	118998694	protein_coding	Abcc4	exon	ENSMUSG00000032849	ProperStrand	137	chr3	68889136	68889216	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-1.8494
chr13	18043496	18043569	LINE	Lx8	L1	chr13Lx818043327	NonProperStrand	1	chr4	131908802	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-inf
chr10	77497565	77497665	protein_coding-noncoding	Aire	utr3	ENSMUSG00000000731	ProperStrand	5	chr6	119312003	119315280	protein_coding	Adipor2	exon	ENSMUSG00000030168	ProperStrand	79	1	-17.6685
chr3	57711053	57711133	LINE	L1_Mur3	L1	chr3L1_Mur357710938	ProperStrand	1	chr3	57711352	57711442	LINE	Lx6	L1	chr3Lx657711150	ProperStrand	1	1	-inf
chr1	84748246	84748490	protein_coding	Trip12	intron	ENSMUSG00000026219	ProperStrand	248	chr9	15130704	15130784	snoRNA	ENSMUSG00000077506_Scarna9	.	ENSMUSG00000077506	ProperStrand	148	1	-8.6598
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr2	26768369	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-2.8774
chr6	124653629	124653879	protein_coding	Lpcat3	utr3	ENSMUSG00000004270	ProperStrand	19	chr11	34135846	34135863	protein_coding	Dock2	intron	ENSMUSG00000020143	NonProperStrand	31	1	-16.9102
chr2	164715224	164716000	protein_coding	Pcif1	exon	ENSMUSG00000039849	ProperStrand	22	chr16	23110967	23111010	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.4786
chr16	11904341	11904412	protein_coding	Cpped1	intron	ENSMUSG00000065979	ProperStrand	13	chr1	63225285	63225322	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	3	-inf
chr18	13143790	13143808	protein_coding	Impact	exon	ENSMUSG00000024423	ProperStrand	32	chr16	23111374	23111505	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-6.0728
chr2	164257636	164257652	protein_coding	Sdc4	intron	ENSMUSG00000017009	ProperStrand	177	chr8	81033474	81033500	protein_coding	Slc10a7	exon	ENSMUSG00000031684	ProperStrand	55	1	-11.3181
chr9	61761158	61761248	protein_coding	Rplp1	exon	ENSMUSG00000007892	ProperStrand	116	chr18	35714149	35714229	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-2.2840
chr4	76614453	76614470	protein_coding	Ptprd	intron	ENSMUSG00000028399	ProperStrand	198	chr5	24079242	24079326	protein_coding	Abcf2	exon	ENSMUSG00000028953	ProperStrand	50	1	-11.2859
chr1	20794946	20796910	protein_coding	Mcm3	exon	ENSMUSG00000041859	ProperStrand	142	chr16	23110827	23111001	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	10	-3.4152
chr15	84101747	84103941	protein_coding	Parvb	exon	ENSMUSG00000022438	ProperStrand	127	chr1	88247835	88247876	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-3.6732
chr3	72282152	72282174	LTR	MT2A	ERVL	chr3MT2A72281783	ProperStrand	1	chr7	29136525	29136585	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-inf
chr11	62366077	62366177	protein_coding	Ubb	exon	ENSMUSG00000019505	ProperStrand	32	chr3	123210854	123210870	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.1535
chr4	140859356	140859372	protein_coding	Epha2	intron	ENSMUSG00000006445	NonProperStrand	3	chr19	8799022	8799051	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-12.1627
chr18	57412089	57412107	protein_coding	Megf10	intron	ENSMUSG00000024593	NonProperStrand	25	chr11	106362640	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-9.1656
chr19	24105191	24105212	protein_coding	Fam189a2	exon	ENSMUSG00000071604	NonProperStrand	2	chr19	8798745	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-12.1939
chr9	78046142	78047310	protein_coding	Gsta4	exon	ENSMUSG00000032348	ProperStrand	82	chr11	69483136	69483236	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.9346
chr2	90235315	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	109789611	109789627	protein_coding	Olfr554	exon	ENSMUSG00000073971	NonProperStrand	66	1	-4.2811
chr4	131781655	131781755	protein_coding	Gmeb1	utr3	ENSMUSG00000028901	ProperStrand	15	chr1	162967502	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-6.1639
chr2	121949511	121949527	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	chr13	51743567	51743662	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-3.9470
chr7	95266597	95266613	protein_coding	Grm5	intron	ENSMUSG00000049583	NonProperStrand	145	chr15	34370661	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-2.0138
chr7	140901048	140905906	protein_coding	Bccip	exon	ENSMUSG00000030983	ProperStrand	19	chr4	131908689	131908854	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-5.3903
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	153514067	153514083	protein_coding	Trp73	utr5	ENSMUSG00000029026	NonProperStrand	3	1	-10.7414
chr4	132278327	132278417	protein_coding	Eya3	utr3	ENSMUSG00000028886	ProperStrand	7	chr4	131908360	131908440	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-13.1071
chr11	96688773	96688873	protein_coding	Nfe2l1	exon	ENSMUSG00000038615	ProperStrand	118	chr5	130300495	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.4355
chr8	108402745	108402835	protein_coding	Nutf2	utr3	ENSMUSG00000008450	ProperStrand	39	chr15	98350199	98350279	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-5.5993
chr2	79132657	79132674	protein_coding-noncoding	Itga4	utr5	ENSMUSG00000027009	NonProperStrand	118	chr11	69481335	69481432	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-2.0371
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chrX	149828130	149828146	protein_coding	Klf8	utr3	ENSMUSG00000041649	NonProperStrand	107	1	-9.2445
chrX	71518353	71518403	protein_coding	Rpl10	exon	ENSMUSG00000008682	ProperStrand	71	chr2	145077958	145209255	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-7.3878
chr4	122968586	122968719	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	chr15	98356816	98356912	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	2	-2.4849
chr17	25856677	25856725	protein_coding	Chtf18	exon	ENSMUSG00000019214	ProperStrand	38	chr12	71146391	71146407	protein_coding	Nin	exon	ENSMUSG00000021068	ProperStrand	95	1	-13.3131
chr12	68768750	68768830	LINE	L1Md_F2	L1	chr12L1Md_F268768613	NonProperStrand	12	chrX	117990468	117990558	protein_coding	Pcdh11x	intron	ENSMUSG00000034755	ProperStrand	15	1	-19.3113
chr6	24684480	24684497	protein_coding	Hyal6	exon	ENSMUSG00000029679	NonProperStrand	114	chr1	145626057	145626172	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	6	-inf
chr16	6456240	6456257	Other	RMER1C	Other	chr16RMER1C6456169	ProperStrand	7	chr19	8963105	8963183	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-6.3961
chr14	15607802	15607852	protein_coding	Slc4a7	exon	ENSMUSG00000021733	ProperStrand	24	chr5	121655129	121655154	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	3	-12.9435
chr9	57385425	57385441	protein_coding	2310046O06Rik	utr5	ENSMUSG00000032305	ProperStrand	135	chr7	29136525	29136599	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.1326
chr14	25312676	25315027	protein_coding	Rps24	exon	ENSMUSG00000025290	ProperStrand	110	chr9	15119324	15119414	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-3.9518
chr5	74489200	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	5	-5.6345
chr4	136098887	136098912	protein_coding	Luzp1	exon	ENSMUSG00000001089	ProperStrand	35	chr1	137198502	137198558	protein_coding	Timm17a	exon	ENSMUSG00000062580	ProperStrand	6	1	-18.4708
chr17	25856650	25856821	protein_coding	Chtf18	exon	ENSMUSG00000019214	ProperStrand	38	chr5	74489544	74489624	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	3	-11.1129
chr12	8778248	8798222	protein_coding	Sdc1	utr5	ENSMUSG00000020592	ProperStrand	15	chr9	15119632	15119969	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	5	-inf
chr19	4734354	4734371	protein_coding	Spnb3	exon	ENSMUSG00000067889	ProperStrand	19	chr4	131908688	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.0948
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr2	24825186	24827046	protein_coding	Wdr85	exon	ENSMUSG00000026975	ProperStrand	323	1	-4.4994
chr11	115134561	115134579	protein_coding	Fdxr	intron	ENSMUSG00000018861	ProperStrand	5	chr13	90238585	90238723	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	1	-13.8055
chr11	97067812	97067862	protein_coding	Npepps	utr3	ENSMUSG00000001441	ProperStrand	30	chr5	114196656	114196756	protein_coding	Sart3	exon	ENSMUSG00000018974	ProperStrand	50	1	-15.0789
chr12	112779147	112779175	protein_coding	Eif5	intron	ENSMUSG00000021282	ProperStrand	125	chr18	75160709	75160777	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	2	-12.3411
chr7	51615498	51615515	protein_coding	1700008O03Rik	utr3	ENSMUSG00000008028	ProperStrand	4	chr16	23111702	23111753	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-7.1763
chr9	111125772	111125852	protein_coding	Lrrfip2	exon	ENSMUSG00000032497	ProperStrand	28	chr5	121655081	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.2085
chr17	38290745	38290764	LTR	MurERV4-int	ERVK	chr17MurERV4-int38290059	ProperStrand	21	chr2	26451868	26451884	protein_coding	Gm20532	intron	ENSMUSG00000092356	ProperStrand	46	1	-16.0002
chrX	152009278	152009294	protein_coding	Ptchd1	exon	ENSMUSG00000041552	NonProperStrand	294	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-8.5045
chr16	21297306	21297386	SINE	MIRb	MIR	chr16MIRb21297322	ProperStrand	1	chr16	21297192	21297282	Simple_repeat	(CA)n	Simple_repeat	chr16(CA)n21297192	NonProperStrand	1	1	-inf
chr6	53846427	53846444	protein_coding	Cpvl	exon	ENSMUSG00000052955	ProperStrand	5	chr12	92811981	92812014	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	1	-13.7310
chr14	25673634	25673651	DNA	MER63D	AcHobo	chr14MER63D25673510	NonProperStrand	65	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-7.5798
chr8	87368480	87368507	protein_coding	Calr	exon	ENSMUSG00000003814	ProperStrand	232	chr4	109148979	109148996	protein_coding	Rnf11	utr5	ENSMUSG00000028557	NonProperStrand	3	1	-16.9821
chr13	76566361	76566377	protein_coding	Mctp1	intron	ENSMUSG00000021596	ProperStrand	4	chr2	57090809	57090827	protein_coding	Gpd2	utr5	ENSMUSG00000026827	ProperStrand	93	1	-17.9098
chr13	49788995	49789113	protein_coding	Iars	intron	ENSMUSG00000037851	ProperStrand	95	chr2	166890543	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	8	-20.3027
chr17	27889440	27889468	protein_coding	D17Wsu92e	utr3	ENSMUSG00000056692	ProperStrand	61	chr16	23111771	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-5.2559
chr3	30708796	30708885	protein_coding	Sec62	exon	ENSMUSG00000027706	ProperStrand	12	chr19	8799036	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	2	-14.5040
chr10	126503268	126504007	protein_coding	Cdk4	exon	ENSMUSG00000006728	ProperStrand	47	chr11	77996558	77996621	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-6.5751
chr4	55022129	55022229	protein_coding	Zfp462	exon	ENSMUSG00000060206	ProperStrand	37	chr16	23110454	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.3186
chr18	53568961	53571224	protein_coding	Ppic	exon	ENSMUSG00000024538	ProperStrand	13	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-9.0805
chr11	116736833	116736923	protein_coding	Mfsd11	utr3	ENSMUSG00000020818	ProperStrand	9	chr5	132421775	132421855	protein_coding	Auts2	intron	ENSMUSG00000029673	NonProperStrand	37	1	-17.9125
chr3	55987231	55987247	protein_coding	Nbea	utr5	ENSMUSG00000027799	NonProperStrand	115	chr7	133929645	133929758	protein_coding	Ppp4c	utr3	ENSMUSG00000030697	ProperStrand	12	1	-15.2838
chr8	83632492	83632509	LINE	Lx7	L1	chr8Lx783631559	NonProperStrand	1	chrX	162900273	162917512	protein_coding	Rab9	utr5	ENSMUSG00000079316	ProperStrand	2	1	-inf
chr18	57400307	57400324	protein_coding	Megf10	exon	ENSMUSG00000024593	ProperStrand	143	chr5	123845040	123845107	protein_coding	Mlxip	exon	ENSMUSG00000038342	ProperStrand	21	1	-13.6954
chr16	44139951	44140041	protein_coding	Naa50	utr5	ENSMUSG00000022698	ProperStrand	56	chr4	131908357	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.5191
chr11	102294587	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr8	87574106	87574153	snoRNA	ENSMUSG00000077527_SNORD41	.	ENSMUSG00000077527	ProperStrand	29	2	-16.3851
chr2	158182156	158182181	lincRNA	9430008C03Rik	intron	ENSMUSG00000085385	ProperStrand	1039	chr5	130295414	130295529	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	3	-2.1440
chr11	68962170	68962187	protein_coding	Aloxe3	exon	ENSMUSG00000020892	NonProperStrand	1	chr5	74489610	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-inf
chr11	31245885	31245965	Simple_repeat	(CCCTAA)n	Simple_repeat	chr11(CCCTAA)n31245795	ProperStrand	1	chr11	31246005	31246095	Simple_repeat	(CCCTAA)n	Simple_repeat	chr11(CCCTAA)n31245984	ProperStrand	1	1	-inf
chr5	138612970	138612986	protein_coding	Mcm7	utr5	ENSMUSG00000029730	ProperStrand	258	chr14	76247711	76247756	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-1.6384
chr3	91960700	91960790	LTR	ORR1A4	MaLR	chr3ORR1A491960667	ProperStrand	1	chr3	91960484	91960564	LTR	RLTR24	ERV1	chr3RLTR2491960378	NonProperStrand	1	1	-inf
chr17	80615489	80615506	protein_coding	Ttc39d	exon	ENSMUSG00000046196	NonProperStrand	1	chr18	73693111	73693132	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-inf
chr19	15989430	15991591	protein_coding	Psat1	exon	ENSMUSG00000024640	ProperStrand	33	chr16	23110852	23110875	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.9284
chr6	122679782	122691785	protein_coding	Slc2a3	intron	ENSMUSG00000003153	ProperStrand	682	chr11	119136228	119136244	protein_coding	Gaa	exon	ENSMUSG00000025579	NonProperStrand	201	2	-9.8252
chr12	60235045	60235135	protein_coding	Ctage5	intron	ENSMUSG00000021000	ProperStrand	35	chr7	150717314	150717394	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-6.5710
chr5	123332170	123332212	protein_coding	Kdm2b	exon	ENSMUSG00000029475	ProperStrand	30	chr4	131865856	131865946	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.9337
chr13	30338191	30338207	protein_coding	Mboat1	utr3	ENSMUSG00000038732	NonProperStrand	148	chr9	15119631	15119764	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-3.7202
chr15	10965488	10965504	protein_coding	Rxfp3	utr3	ENSMUSG00000060735	ProperStrand	37	chr12	88778673	88778734	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-7.4608
chr3	95701012	95701102	protein_coding	Aph1a	utr3	ENSMUSG00000015750	ProperStrand	11	chr2	77742041	77742210	protein_coding	Cwc22	exon	ENSMUSG00000027014	ProperStrand	17	3	-inf
chr4	131908357	131908461	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr16	20332606	20332623	protein_coding	Abcc5	utr3	ENSMUSG00000022822	NonProperStrand	7	1	-11.6713
chr19	4195006	4195022	protein_coding	Ppp1ca	exon	ENSMUSG00000040385	ProperStrand	40	chr1	162965978	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-4.3669
chr4	122973243	122974954	protein_coding	Pabpc4	exon	ENSMUSG00000011257	ProperStrand	85	chr3	88715214	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-6.5433
chr5	137409990	137410007	lincRNA	4933404O12Rik	exon	ENSMUSG00000085062	NonProperStrand	11	chr5	130295437	130295537	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	2	-13.8900
chr18	57400307	57400324	protein_coding	Megf10	exon	ENSMUSG00000024593	ProperStrand	143	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-5.5229
chr2	84449140	84449230	protein_coding	Ctnnd1	exon	ENSMUSG00000034101	ProperStrand	26	chr5	130300460	130300540	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.0304
chr10	122568443	122570049	protein_coding	Usp15	exon	ENSMUSG00000020124	ProperStrand	24	chrX	34622906	34622957	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-8.1375
chr2	37436257	37436274	protein_coding	Strbp	utr3	ENSMUSG00000026915	NonProperStrand	4	chr1	162966189	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-13.2442
chr1	95223923	95223969	protein_coding	Pask	exon	ENSMUSG00000026274	ProperStrand	20	chr4	131866240	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-5.7884
chr12	18541791	18541816	SINE	B1_Mus1	Alu	chr12B1_Mus118541697	NonProperStrand	2	chr4	131908779	131908861	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-inf
chr11	77996604	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	chr6	97112810	97112887	snoRNA	ENSMUSG00000065728_SNORA36	.	ENSMUSG00000065728	ProperStrand	158	1	-4.2198
chrX	91435146	91435187	protein_coding	Eif2s3x	utr3	ENSMUSG00000035150	NonProperStrand	83	chr2	130103751	130103782	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-7.8232
chr7	73194651	73194674	protein_coding	Pcsk6	utr3	ENSMUSG00000030513	ProperStrand	32	chr19	8963026	8963110	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-8.5335
chr16	4614816	4614895	protein_coding	Glis2	utr3	ENSMUSG00000014303	ProperStrand	15	chr1	162965553	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.9503
chr8	84861521	84861540	protein_coding	Il15	intron	ENSMUSG00000031712	NonProperStrand	1	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chrX	72214248	72214264	protein_coding-noncoding	Gab3	utr3	ENSMUSG00000032750	ProperStrand	420	chr1	88995234	88995253	protein_coding	Alpi	exon	ENSMUSG00000079440	NonProperStrand	7	1	-13.8438
chr9	110843283	110844882	protein_coding	Tdgf1	exon	ENSMUSG00000032494	ProperStrand	218	chr11	69483184	69483264	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-2.2604
chr5	45401547	45401627	LINE	L1Md_F2	L1	chr5L1Md_F245401408	NonProperStrand	7	chr7	54442449	54442539	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	1	-16.0422
chr2	65376282	65376298	protein_coding	Scn3a	intron	ENSMUSG00000057182	ProperStrand	26	chr4	131865904	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.1929
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr11	87275974	87285028	snoRNA	ENSMUSG00000070168_U3	.	ENSMUSG00000070168	ProperStrand	3	1	-12.7131
chr3	126668028	126668044	protein_coding	Ank2	exon	ENSMUSG00000032826	ProperStrand	30	chr16	23111776	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.0878
chr11	116005210	116005228	protein_coding	Fbf1	intron	ENSMUSG00000020776	NonProperStrand	36	chr8	73419327	73419361	protein_coding	Rpl18a	exon	ENSMUSG00000045128	ProperStrand	394	1	-10.5736
chrX	76949087	76949178	LINE	L1Md_T	L1	chrXL1Md_T76949110	ProperStrand	1	chrX	76949234	76949324	LTR	RLTR13D1	ERVK	chrXRLTR13D176949224	NonProperStrand	1	1	-inf
chr12	111704832	111704922	protein_coding	Ppp2r5c	intron	ENSMUSG00000017843	NonProperStrand	16	chr3	27236736	27236816	protein_coding	Tnfsf10	utr3	ENSMUSG00000039304	NonProperStrand	4	1	-inf
chr5	93591219	93591284	protein_coding	Sept11	exon	ENSMUSG00000058013	ProperStrand	79	chr8	46123701	46125164	protein_coding	Fat1	exon	ENSMUSG00000070047	ProperStrand	306	4	-19.9180
chr5	111238686	111238740	protein_coding	Ulk1	exon	ENSMUSG00000029512	ProperStrand	92	chr4	131866155	131866245	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	12	-21.0695
chr9	71499122	71564244	protein_coding	Cgnl1	exon	ENSMUSG00000032232	ProperStrand	46	chr4	131908356	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-3.3401
chr13	45757574	45757593	protein_coding	Atxn1	intron	ENSMUSG00000046876	ProperStrand	28	chr17	24857769	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-6.2280
chr1	59761634	59761715	snoRNA	ENSMUSG00000089093_Snord11	.	ENSMUSG00000089093	ProperStrand	193	chr18	33954849	33954939	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	3	-4.4533
chr4	128899900	128899916	protein_coding	C77080	exon	ENSMUSG00000050390	NonProperStrand	28	chr7	29136544	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	7	-19.6173
chr17	25037498	25037559	protein_coding	Mapk8ip3	exon	ENSMUSG00000024163	ProperStrand	10	chr4	116828379	116828453	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-12.0420
chr2	162909474	162909526	protein_coding	Mybl2	utr3	ENSMUSG00000017861	ProperStrand	230	chr17	47533193	47533210	protein_coding	Guca1a	intron	ENSMUSG00000023982	ProperStrand	7	1	-15.0562
chr8	24031197	24031223	protein_coding	Myst3	intron	ENSMUSG00000031540	ProperStrand	111	chr16	23111394	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-1.1737
chr17	32620370	32623767	protein_coding	Cyp4f39	exon	ENSMUSG00000061126	ProperStrand	4	chr17	24857782	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-7.6570
chr7	29599288	29599360	protein_coding-noncoding	Hnrnpl	utr5	ENSMUSG00000015165	ProperStrand	23	chr3	123210881	123210971	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.7662
chr18	78018663	78018708	protein_coding	Atp5a1	exon	ENSMUSG00000025428	ProperStrand	254	chrX	34622906	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-0.9200
chr8	72338488	72339346	protein_coding	Gmip	exon	ENSMUSG00000036246	ProperStrand	102	chr18	35716834	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.3541
chr5	71516401	71516419	LINE	Lx5	L1	chr5Lx571515987	ProperStrand	3	chr7	29136576	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-inf
chr5	145712296	145712315	protein_coding	Smurf1	intron	ENSMUSG00000038780	ProperStrand	45	chr16	23111448	23111496	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.6772
chr14	55222259	55222278	protein_coding	4931414P19Rik	intron	ENSMUSG00000022179	ProperStrand	8	chr19	47970971	47970987	protein_coding	Itprip	utr3	ENSMUSG00000079254	ProperStrand	75	1	-17.0121
chr7	51503503	51503548	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	NonProperStrand	2	chr19	8963094	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-17.8653
chr17	75239659	75239704	protein_coding	Ttc27	exon	ENSMUSG00000024078	ProperStrand	14	chr7	109149271	109149287	protein_coding	Numa1	exon	ENSMUSG00000066306	NonProperStrand	171	1	-14.1765
chr13	8766326	8766420	protein_coding	Adarb2	utr3	ENSMUSG00000052551	NonProperStrand	61	chr15	79913288	79913353	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-3.5617
chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	chr5	147279818	147279866	protein_coding	Wasf3	exon	ENSMUSG00000029636	ProperStrand	32	1	-10.3323
chr1	173341933	173341949	protein_coding	Usf1	utr5	ENSMUSG00000026641	NonProperStrand	144	chr4	86500808	86500853	protein_coding	Rps6	exon	ENSMUSG00000028495	ProperStrand	263	1	-8.5976
chr14	64829132	64829149	protein_coding	Msra	intron	ENSMUSG00000054733	NonProperStrand	84	chr16	23111689	23111734	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.3953
chr11	120645352	120645368	protein_coding	Rfng	exon	ENSMUSG00000025158	NonProperStrand	13	chrX	34622906	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	3	-14.3548
chr8	125418802	125418819	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	chr1	72290908	72290972	snRNA	ENSMUSG00000093111_AC120136.1	.	ENSMUSG00000093111	ProperStrand	137	3	-17.7464
chr7	126862752	126864060	protein_coding	Thumpd1	exon	ENSMUSG00000030942	ProperStrand	14	chr1	88247739	88247777	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-8.0059
chr9	44143051	44143151	protein_coding	H2afx	exon	ENSMUSG00000049932	ProperStrand	137	chr5	74489622	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-2.3099
chr4	134362456	134362485	protein_coding	Tmem57	exon	ENSMUSG00000028826	ProperStrand	16	chr5	64203925	64203942	protein_coding	0610040J01Rik	intron	ENSMUSG00000060512	ProperStrand	36	1	-17.0346
chrX	40944841	40944857	protein_coding	Gm362	exon	ENSMUSG00000078320	ProperStrand	129	chr11	106362304	106362327	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-4.3623
chr6	18060435	18060452	LINE	L2b	L2	chr6L2b18060428	NonProperStrand	3	chr10	20685458	20685495	protein_coding	Ahi1	exon	ENSMUSG00000019986	ProperStrand	10	1	-inf
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr2	126946954	126947021	protein_coding	Ncaph	exon	ENSMUSG00000034906	ProperStrand	43	4	-23.0146
chr12	86457694	86457794	protein_coding	Dlst	intron	ENSMUSG00000004789	ProperStrand	52	chr10	110918637	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	4	-12.2865
chr5	122691914	122691930	protein_coding	Hvcn1	utr3	ENSMUSG00000064267	ProperStrand	182	chr11	106362639	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-5.2217
chrX	72214248	72214264	protein_coding-noncoding	Gab3	utr3	ENSMUSG00000032750	ProperStrand	420	chr11	62416575	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-3.1090
chr2	158185529	158185547	lincRNA	9430008C03Rik	exon	ENSMUSG00000085385	ProperStrand	1039	chr5	115939533	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	3	-6.4406
chr2	84902849	84902878	protein_coding	Tnks1bp1	exon	ENSMUSG00000033955	ProperStrand	23	chr4	131866160	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-5.5102
chr10	90586104	90586176	protein_coding-noncoding	Slc25a3	utr3	ENSMUSG00000061904	ProperStrand	13	chr11	50713094	50713112	protein_coding	Zfp2	utr3	ENSMUSG00000049321	ProperStrand	1	1	-inf
chr7	19257823	19257913	LTR	ORR1A2-int	MaLR	chr7ORR1A2-int19256896	ProperStrand	1	chr7	19310958	19311048	protein_coding	Psg22	intron	ENSMUSG00000044903	ProperStrand	1	1	-inf
chr5	124573980	124574070	protein_coding	Pitpnm2	exon	ENSMUSG00000029406	ProperStrand	12	chr17	39985651	39985731	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-9.1812
chr18	36961643	36961659	misc_RNA	Vault	.	ENSMUSG00000065145	ProperStrand	177	chr15	76433485	76433538	protein_coding	Cpsf1	exon	ENSMUSG00000034022	ProperStrand	127	1	-9.6384
chr19	42194678	42194694	protein_coding	Pi4k2a	utr3	ENSMUSG00000025178	ProperStrand	23	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-11.3090
chr11	119966345	119966397	protein_coding	Slc38a10	exon	ENSMUSG00000061306	ProperStrand	91	chr11	116938610	116938710	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-5.3433
chr4	56910515	56910605	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	chr5	147646723	147646803	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	1	-1.3272
chr11	51742206	51742223	LTR	ORR1E	MaLR	chr11ORR1E51741903	NonProperStrand	1	chr11	62416575	62416635	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-inf
chr17	94768315	94768333	LINE	L1_Mus3	L1	chr17L1_Mus394764195	ProperStrand	24	chr5	108336363	108336422	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-6.6878
chr19	60603144	60603225	protein_coding	2700078E11Rik	utr3	ENSMUSG00000033417	ProperStrand	12	chr17	35088957	35088976	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-9.1155
chr11	83107807	83107902	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	chr2	26494760	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	6	-3.1985
chr11	116720616	116720663	protein_coding	Mfsd11	exon	ENSMUSG00000020818	ProperStrand	9	chr19	8798741	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-8.6202
chr3	26220145	26220162	LINE	Lx4B	L1	chr3Lx4B26219849	NonProperStrand	13	chr5	74489212	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	4	-inf
chr19	11015616	11015632	protein_coding	Gpr44	exon	ENSMUSG00000034117	NonProperStrand	118	chr9	120038466	120038545	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-3.4427
chr13	64863287	64863304	protein_coding	Cntnap3	exon	ENSMUSG00000033063	ProperStrand	87	chr10	23505546	23505627	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	3	-15.4149
chr10	80644648	80644701	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr18	82803179	82806139	protein_coding	Zfp236	exon	ENSMUSG00000041258	ProperStrand	15	1	-8.8893
chr11	75471321	75471905	protein_coding	Myo1c	exon	ENSMUSG00000017774	ProperStrand	38	chr2	91436305	91436336	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	6	-22.5232
chr11	102264624	102264732	protein_coding	Slc25a39	utr3	ENSMUSG00000018677	ProperStrand	35	chr7	53256425	53257948	protein_coding	Abcc6	exon	ENSMUSG00000030834	NonProperStrand	5	1	-18.8685
chr14	21384370	21384389	antisense	1810062O18Rik	.	ENSMUSG00000084925	ProperStrand	4	chr4	131908244	131908297	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-6.5415
chrX	71517861	71517951	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	chr1	161270415	161270495	snoRNA	ENSMUSG00000089536_Scarna3a	.	ENSMUSG00000089536	ProperStrand	247	1	-3.8156
chr11	101466275	101466351	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	chr1	63225582	63225672	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-2.4908
chr4	43505766	43505866	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr6	93765818	93862891	protein_coding	Magi1	intron	ENSMUSG00000045095	NonProperStrand	47	5	-15.0190
chr5	35237022	35237039	protein_coding	Htt	exon	ENSMUSG00000029104	NonProperStrand	9	chr4	131865855	131865932	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.2544
chr4	140629635	140630915	protein_coding	Necap2	exon	ENSMUSG00000028923	ProperStrand	4	chr7	49865169	49865223	protein_coding	9830147E19Rik	utr3	ENSMUSG00000074158	ProperStrand	3	1	-inf
chr15	95050371	95050387	protein_coding	Nell2	utr3	ENSMUSG00000022454	ProperStrand	64	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-7.6108
chr8	86187819	86187835	protein_coding	Gipc1	exon	ENSMUSG00000019433	ProperStrand	60	chr2	26494708	26494762	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.1070
chr7	52678157	52679531	protein_coding	Ruvbl2	exon	ENSMUSG00000003868	ProperStrand	41	chr10	90581129	90581162	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	4	-17.0794
chr13	8987166	8988371	protein_coding	Gtpbp4	exon	ENSMUSG00000021149	ProperStrand	26	chr7	29136590	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.8707
chr5	115593797	115593828	protein_coding	Mlec	utr3	ENSMUSG00000048578	ProperStrand	47	chr11	69481387	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.6486
chrX	134573797	134573815	protein_coding	Il1rapl2	intron	ENSMUSG00000059203	ProperStrand	11	chr7	116663633	116663711	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-5.7314
chr9	78327846	78327932	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr4	41150098	41150136	snoRNA	ENSMUSG00000089265_SNORD121A	.	ENSMUSG00000089265	ProperStrand	370	4	-9.9935
chr16	34357475	34360911	protein_coding	Kalrn	exon	ENSMUSG00000061751	NonProperStrand	52	chr7	116663633	116663762	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.7600
chr15	103182043	103182095	protein_coding	Itga5	exon	ENSMUSG00000000555	ProperStrand	28	chr14	76247753	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-9.2600
chr11	87240292	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	chr9	120039567	120039647	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.4031
chr10	61273899	61273979	LINE	L1MEc	L1	chr10L1MEc61273909	NonProperStrand	1	chr10	61274041	61274131	Simple_repeat	(TG)n	Simple_repeat	chr10(TG)n61274012	ProperStrand	1	1	-inf
chr7	20158811	20158832	protein_coding	Gemin7	utr5	ENSMUSG00000044709	ProperStrand	4	chr7	135842910	135845761	protein_coding	Mcmbp	exon	ENSMUSG00000048170	ProperStrand	87	1	-18.0466
chr9	21602970	21602986	protein_coding	Kank2	utr5	ENSMUSG00000032194	ProperStrand	196	chr11	69398304	69398358	protein_coding	Trp53	intron	ENSMUSG00000059552	ProperStrand	47	1	-11.4315
chr4	31856733	31856750	LINE	Lx7	L1	chr4Lx731856435	NonProperStrand	14	chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	1	-10.7481
chr17	43843088	43843104	protein_coding	Cyp39a1	intron	ENSMUSG00000023963	NonProperStrand	81	chr12	17552962	17553046	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-4.5114
chr15	83921053	83922723	protein_coding	Sult4a1	exon	ENSMUSG00000018865	ProperStrand	8	chr2	71247117	71248283	protein_coding	Hat1	exon	ENSMUSG00000027018	ProperStrand	53	1	-17.5757
chr1	194994167	194994257	protein_coding	Irf6	intron	ENSMUSG00000026638	NonProperStrand	3	chr1	196562461	196562551	protein_coding	Plxna2	intron	ENSMUSG00000026640	ProperStrand	6	1	-inf
chr5	37729867	37729924	protein_coding	Evc2	exon	ENSMUSG00000050248	ProperStrand	8	chr8	26879777	26879793	protein_coding	Gm17484	utr3	ENSMUSG00000091514	ProperStrand	68	1	-17.0640
chr10	60206733	60206794	protein_coding	Slc29a3	intron	ENSMUSG00000020100	ProperStrand	23	chr16	23111705	23111753	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-12.1292
chr4	141697485	141697541	protein_coding	Kazn	utr3	ENSMUSG00000040606	ProperStrand	123	chr18	73693111	73693138	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-4.1439
chr2	90235299	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	28370923	28370939	protein_coding	Eif4ebp1	exon	ENSMUSG00000031490	NonProperStrand	35	1	-5.5085
chr17	24665421	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	chr16	18240811	18240911	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	2	-2.4860
chr1	55042755	55042800	protein_coding	Sf3b1	utr3	ENSMUSG00000025982	ProperStrand	158	chr11	63885336	63887052	protein_coding	Cox10	exon	ENSMUSG00000042148	NonProperStrand	187	1	-9.0922
chr3	102982442	102982532	protein_coding	Bcas2	utr3	ENSMUSG00000005687	ProperStrand	19	chr15	5068428	5068480	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-8.3722
chr10	77055610	77061248	protein_coding	Pttg1ip	exon	ENSMUSG00000009291	ProperStrand	28	chr16	23110889	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-3.6312
chr11	17121459	17121504	protein_coding	Wdr92	intron	ENSMUSG00000078970	ProperStrand	8	chr15	34370545	34370645	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-7.5453
chr16	15543128	15543153	LTR	RMER3D-int	ERVK	chr16RMER3D-int15543098	NonProperStrand	1	chr13	107767102	107767202	protein_coding	Kif2a	exon	ENSMUSG00000021693	ProperStrand	32	1	-inf
chr9	15069885	15069901	protein_coding	Med17	exon	ENSMUSG00000031935	ProperStrand	135	chr7	118219579	118219647	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-4.6992
chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	chr5	115939535	115939584	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-3.3090
chr16	19769665	19769727	protein_coding	B3gnt5	exon	ENSMUSG00000022686	ProperStrand	1	chr4	131865879	131865979	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr8	11054389	11054406	lincRNA	9530052E02Rik	exon	ENSMUSG00000085270	NonProperStrand	12	chr1	162967490	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-6.6191
chr8	90724319	90724335	protein_coding	Papd5	exon	ENSMUSG00000036779	NonProperStrand	8	chr2	66343068	66346581	protein_coding	Scn9a	exon	ENSMUSG00000075316	ProperStrand	58	1	-17.4640
chr7	52147231	52147479	protein_coding	Med25	utr5	ENSMUSG00000002968	ProperStrand	33	chr10	23505579	23505623	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	2	-13.9166
chr6	118346785	118348122	protein_coding	Bms1	exon	ENSMUSG00000030138	ProperStrand	107	chr10	80641700	80641762	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	2	-10.3543
chr5	112778320	112807111	protein_coding	Hps4	exon	ENSMUSG00000042328	ProperStrand	27	chr4	131908688	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	7	-17.9499
chr18	35714179	35714269	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	chr12	81492716	81492740	snoRNA	ENSMUSG00000088158_Scarna3b	.	ENSMUSG00000088158	ProperStrand	147	1	-1.8996
chr18	79306045	79306061	protein_coding	Setbp1	utr5	ENSMUSG00000024548	NonProperStrand	8	chr19	8963027	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-6.1145
chr7	148066734	148066783	protein_coding	Sirt3	intron	ENSMUSG00000025486	ProperStrand	33	chr9	120037897	120037933	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	2	-9.5893
chr16	95915687	95915707	LTR	MLT1C	MaLR	chr16MLT1C95915508	ProperStrand	1	chr11	98860601	98862121	protein_coding	Top2a	exon	ENSMUSG00000020914	ProperStrand	324	1	-inf
chr7	109376826	109376917	protein_coding	Pgap2	intron	ENSMUSG00000030990	ProperStrand	4	chr1	162967532	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	3	-19.8676
chr17	41095333	41095355	protein_coding	Mut	exon	ENSMUSG00000023921	ProperStrand	20	chr2	79843543	79843559	protein_coding	Pde1a	intron	ENSMUSG00000059173	NonProperStrand	275	1	-12.4901
chr7	29944810	29944910	protein_coding	Spred3	utr3	ENSMUSG00000037239	ProperStrand	10	chr4	131908251	131908288	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	8	-20.5244
chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	chr4	142698196	142698255	protein_coding	Prdm2	utr3	ENSMUSG00000057637	ProperStrand	46	1	-9.5991
chr17	39979944	39980019	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr9	103401280	103401296	protein_coding	Tmem108	exon	ENSMUSG00000042757	NonProperStrand	323	1	-3.9556
chr10	119802091	119802191	lincRNA	1700006J14Rik	intron	ENSMUSG00000034764	ProperStrand	12	chr18	35716813	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-5.1577
chr11	3245132	3245156	protein_coding	Limk2	utr3	ENSMUSG00000020451	ProperStrand	100	chr9	22054497	22054520	protein_coding	Zfp599	exon	ENSMUSG00000062794	ProperStrand	3	1	-19.1351
chr5	42211809	42211889	protein_coding	Bod1l	exon	ENSMUSG00000061755	ProperStrand	43	chr9	120039590	120039680	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.9364
chr2	5819680	5819733	protein_coding	Dhtkd1	utr3	ENSMUSG00000025815	ProperStrand	46	chr1	162965554	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.7662
chr4	11288346	11292184	protein_coding	Esrp1	exon	ENSMUSG00000040728	ProperStrand	12	chr10	110918549	110918629	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-6.5914
chr18	75528155	75528235	protein_coding	Smad7	utr5	ENSMUSG00000025880	ProperStrand	83	chr16	23111721	23111811	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.4124
chr2	131126626	131178622	protein_coding	Rnf24	utr3	ENSMUSG00000048911	ProperStrand	11	chr16	23110902	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-4.7202
chr12	111893026	111893106	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr17	85413200	85413290	protein_coding	Ppm1b	utr3	ENSMUSG00000061130	ProperStrand	36	6	-22.0745
chr6	22258311	22258365	protein_coding	Fam3c	utr3	ENSMUSG00000029672	ProperStrand	13	chr7	24713726	24713742	protein_coding	Vmn1r179	exon	ENSMUSG00000046924	NonProperStrand	69	1	-16.1553
chr14	76247758	76247820	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	chr9	40611668	40611723	snoRNA	ENSMUSG00000075876_Snord14c	.	ENSMUSG00000075876	ProperStrand	104	3	-7.9698
chr7	6371465	6371484	protein_coding	AC188461.4	intron	ENSMUSG00000093536	NonProperStrand	5	chr4	116875149	116875239	snRNA	ENSMUSG00000070228_U5	.	ENSMUSG00000070228	NonProperStrand	2	1	-inf
chr14	66484319	66484376	protein_coding	Ccdc25	utr3	ENSMUSG00000022035	ProperStrand	15	chr1	40081979	40082016	protein_coding	Map4k4	utr3	ENSMUSG00000026074	ProperStrand	348	1	-12.6104
chr1	72871189	72895858	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	chr8	32260335	32260424	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	2	-2.5263
chr12	71312110	71317588	protein_coding	Pygl	exon	ENSMUSG00000021069	ProperStrand	4	chr7	20489457	20489474	protein_coding	Pvr	utr3	ENSMUSG00000040511	ProperStrand	4	1	-inf
chr10	55162424	55162440	LINE	L1_Rod	L1	chr10L1_Rod55162299	ProperStrand	2	chr2	90235286	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	1	-11.8384
chr19	47181505	47181568	protein_coding	Pdcd11	exon	ENSMUSG00000025047	ProperStrand	137	chr16	23111742	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-0.7710
chrX	101608402	101608418	protein_coding	Abcb7	intron	ENSMUSG00000031333	NonProperStrand	4	chr11	97642952	97643063	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-7.8635
chr13	60837017	60837037	protein_coding	Dapk1	intron	ENSMUSG00000021559	ProperStrand	109	chr14	76247711	76247780	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-3.0707
chr8	12757419	12757438	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr6	12329478	12329496	protein_coding	Thsd7a	exon	ENSMUSG00000032625	ProperStrand	10	1	-12.2541
chr11	6523906	6523922	protein_coding	Tbrg4	exon	ENSMUSG00000000384	NonProperStrand	56	chr6	124665389	124665453	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	1	-7.0711
chr11	55313011	55313091	protein_coding	G3bp1	utr3	ENSMUSG00000018583	ProperStrand	106	chr17	25081263	25081353	protein_coding	Hn1l	utr3	ENSMUSG00000024165	ProperStrand	45	1	-12.7506
chrX	147063395	147069074	protein_coding	Pfkfb1	exon	ENSMUSG00000025271	ProperStrand	5	chr3	20238638	20238656	protein_coding	Agtr1b	intron	ENSMUSG00000054988	NonProperStrand	39	1	-18.1128
chr1	63223707	63223781	protein_coding	Eef1b2	utr5	ENSMUSG00000025967	ProperStrand	106	chr9	63868722	63868738	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	1	-7.4512
chr19	46022236	46022252	protein_coding	9130011E15Rik	intron	ENSMUSG00000039901	ProperStrand	129	chr2	26494708	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.8133
chr2	143038589	143038679	LTR	MTEa	MaLR	chr2MTEa143038402	NonProperStrand	1	chr2	143038819	143038899	SINE	B4	B4	chr2B4143038738	ProperStrand	1	1	-inf
chr8	125626945	125627005	snoRNA	ENSMUSG00000064450_Snord68	.	ENSMUSG00000064450	ProperStrand	181	chr2	26493389	26493476	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-1.8288
chr10	110052690	110052707	LINE	L2a	L2	chr10L2a110052646	NonProperStrand	9	chr9	20677419	20677440	protein_coding	A230050P20Rik	intron	ENSMUSG00000038884	ProperStrand	19	1	-19.1915
chr4	116826699	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	chr18	35102297	35102340	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	3	-2.8825
chr13	52718076	52718092	protein_coding	Syk	exon	ENSMUSG00000021457	NonProperStrand	125	chr11	6428076	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.9375
chr2	154692655	154692745	protein_coding	Raly	utr3	ENSMUSG00000027593	ProperStrand	116	chr11	6428088	6428156	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.0573
chr10	114857820	114857837	protein_coding	Zfc3h1	exon	ENSMUSG00000034163	ProperStrand	58	chr1	59539683	59539700	protein_coding	Fzd7	utr5	ENSMUSG00000041075	ProperStrand	373	2	-15.3549
chr3	56671216	56671306	LTR	MLT1B	MaLR	chr3MLT1B56671116	ProperStrand	1	chr3	56671510	56671590	SINE	B3	B2	chr3B356671432	ProperStrand	1	1	-inf
chr6	122685591	122686613	protein_coding	Slc2a3	exon	ENSMUSG00000003153	ProperStrand	682	chr2	84887169	84887189	protein_coding	Ssrp1	utr3	ENSMUSG00000027067	ProperStrand	118	1	-7.1035
chr12	107067349	107067366	protein_coding	Papola	exon	ENSMUSG00000021111	NonProperStrand	11	chr9	74923250	74923300	protein_coding	Myo5a	intron	ENSMUSG00000034593	ProperStrand	89	1	-15.9950
chr7	4744818	4744887	protein_coding	Rpl28	utr5	ENSMUSG00000030432	ProperStrand	220	chr12	60141322	60141412	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-4.3023
chr4	116875149	116875250	snRNA	ENSMUSG00000070228_U5	.	ENSMUSG00000070228	ProperStrand	131	chr16	23111372	23111459	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-1.6131
chr15	9043314	9043406	protein_coding	Skp2	utr3	ENSMUSG00000054115	ProperStrand	14	chr18	75161142	75161172	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	7	-20.3825
chr16	57391758	57391792	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr6	115757991	115758048	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	3	-2.7081
chr6	71524290	71529794	protein_coding	Chmp3	utr3	ENSMUSG00000053119	ProperStrand	16	chr16	23110890	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-3.6512
chr11	21466720	21471767	protein_coding	Mdh1	utr5	ENSMUSG00000020321	ProperStrand	16	chr2	26494708	26494802	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.6366
chr9	72587316	72589454	protein_coding	Nedd4	exon	ENSMUSG00000032216	ProperStrand	308	chr17	24665439	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-1.9904
chr13	55088673	55088737	protein_coding	Unc5a	intron	ENSMUSG00000025876	ProperStrand	19	chr1	93218763	93218779	protein_coding	Espnl	exon	ENSMUSG00000049515	ProperStrand	2	1	-inf
chr14	52780394	52780425	protein_coding	Supt16h	utr3	ENSMUSG00000035726	ProperStrand	193	chr2	125499562	125499579	protein_coding	Eid1	utr3	ENSMUSG00000091337	ProperStrand	60	1	-10.9700
chr9	60697267	60697994	protein_coding	Uaca	exon	ENSMUSG00000034485	ProperStrand	109	chr2	63936035	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	2	-10.7666
chr5	30922830	30922849	protein_coding	Kcnk3	intron	ENSMUSG00000049265	NonProperStrand	21	chr16	23111385	23111418	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.9586
chr7	133940372	133940880	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	chr9	78326897	78326987	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-1.7808
chr11	117152238	117152254	protein_coding	Sept9	exon	ENSMUSG00000059248	NonProperStrand	8	chr8	32260335	32260423	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	2	-13.9993
chr19	41970608	41970624	protein_coding	Rrp12	utr5	ENSMUSG00000035049	ProperStrand	106	chr1	36231850	36231922	protein_coding	Uggt1	exon	ENSMUSG00000037470	ProperStrand	67	1	-11.9477
chr15	12748013	12751216	protein_coding	6030458C11Rik	exon	ENSMUSG00000022195	ProperStrand	12	chr18	35716833	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-12.4231
chr18	36827212	36827255	protein_coding	Sra1	exon	ENSMUSG00000006050	ProperStrand	5	chrX	83437280	83437380	protein_coding	Nr0b1	exon	ENSMUSG00000025056	ProperStrand	37	1	-18.7245
chr9	70960077	70960093	protein_coding	Aqp9	exon	ENSMUSG00000032204	NonProperStrand	118	chr18	35714194	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-2.2556
chr17	35960303	35960320	protein_coding	Flot1	utr5	ENSMUSG00000059714	ProperStrand	8	chr7	116664854	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-6.4335
chr17	39979944	39980024	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr12	85513940	85514030	protein_coding	C130039O16Rik	exon	ENSMUSG00000042507	ProperStrand	75	1	-6.7800
chr15	50116649	50116729	LTR	RLTR20B3	ERVK	chr15RLTR20B350116424	NonProperStrand	1	chr15	50116347	50116437	SINE	ID4_	ID	chr15ID4_50116338	ProperStrand	1	1	-inf
chr9	21606177	21606193	protein_coding	Dock6	exon	ENSMUSG00000032198	NonProperStrand	30	chr6	122273482	122273631	protein_coding	Phc1	exon	ENSMUSG00000040669	ProperStrand	158	1	-12.7723
chr11	119204996	119205061	protein_coding	Sgsh	utr3	ENSMUSG00000005043	ProperStrand	67	chr11	68886973	68887034	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-3.9361
chr2	146660144	146660161	antisense	Gm14114	.	ENSMUSG00000087618	NonProperStrand	11	chrX	54499648	54502153	protein_coding	Arhgef6	exon	ENSMUSG00000031133	ProperStrand	20	1	-18.9599
chr4	132530098	132530117	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	chr2	130101973	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	10	-20.7696
chr13	47182537	47182627	protein_coding	Dek	intron	ENSMUSG00000021377	ProperStrand	36	chr16	23111374	23111454	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.0295
chr12	112779147	112779276	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	chr1	187066894	187066915	snoRNA	ENSMUSG00000077571_Snora36b	.	ENSMUSG00000077571	ProperStrand	244	1	-2.2293
chr12	114290175	114290191	protein_coding	Pacs2	intron	ENSMUSG00000021143	NonProperStrand	302	chr13	46862971	46863025	snoRNA	ENSMUSG00000064558_SNORA55	.	ENSMUSG00000064558	ProperStrand	187	1	-7.8026
chr8	112600476	112600496	LTR	ORR1A2	MaLR	chr8ORR1A2112600465	ProperStrand	2	chr17	39985173	39985295	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-13.3651
chr14	56159296	56159313	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	chr1	63225259	63225322	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	2	-10.4727
chr17	35299543	35299642	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	chr1	161270497	161270554	snoRNA	ENSMUSG00000089536_Scarna3a	.	ENSMUSG00000089536	ProperStrand	247	1	-2.2102
chrX	98276140	98276176	protein_coding	Slc7a3	exon	ENSMUSG00000031297	ProperStrand	8	chr17	35299548	35299638	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-8.8452
chr3	34550540	34550630	protein_coding	Sox2	utr3	ENSMUSG00000074637	ProperStrand	299	chr18	33954858	33954938	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-0.9459
chr2	71149567	71149606	protein_coding	Slc25a12	exon	ENSMUSG00000027010	ProperStrand	6	chr16	23110940	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-6.6757
chr8	109407962	109408010	protein_coding	Chtf8	utr3	ENSMUSG00000046691	ProperStrand	33	chr16	23111754	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-10.2707
chr5	100659340	100659357	pseudogene	Gm8091	.	ENSMUSG00000085915	NonProperStrand	4	chr9	120038611	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-8.5118
chr9	78326475	78326546	protein_coding	Eef1a1	utr3	ENSMUSG00000037742	ProperStrand	1990	chr7	121260960	121261055	protein_coding	Rras2	utr5	ENSMUSG00000055723	ProperStrand	26	1	-8.0061
chr10	116443734	116443750	protein_coding	Best3	intron	ENSMUSG00000020169	NonProperStrand	12	chr9	40612879	40612920	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	1	-12.8261
chr10	88272544	88272734	protein_coding	Utp20	exon	ENSMUSG00000004356	ProperStrand	45	chr7	117189942	117190032	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-6.5281
chr15	79736996	79737337	protein_coding	Apobec3	exon	ENSMUSG00000009585	ProperStrand	14	chr9	120038475	120038529	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.8314
chr5	38622143	38622525	protein_coding	Lyar	exon	ENSMUSG00000067367	ProperStrand	33	chr19	8798484	8798555	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-6.3887
chr3	110053654	110053754	protein_coding	Prmt6	exon	ENSMUSG00000049300	ProperStrand	4	chr10	23505150	23505196	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-6.2798
chr7	104056739	104056755	antisense	Gm15415	.	ENSMUSG00000087304	ProperStrand	8	chr3	108357255	108357355	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-8.5976
chr2	90235314	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	18277838	18277856	protein_coding	Zfp558	utr5	ENSMUSG00000074500	ProperStrand	1	1	-inf
chr11	88244115	88244132	protein_coding	Msi2	intron	ENSMUSG00000069769	ProperStrand	159	chr5	23358058	23358078	snoRNA	ENSMUSG00000093321_Snord93	.	ENSMUSG00000093321	ProperStrand	218	2	-13.9226
chr2	90235296	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	32113274	32113291	protein_coding	Rhbdf1	exon	ENSMUSG00000020282	ProperStrand	23	1	-6.3423
chr9	24549571	24549614	protein_coding	Tbx20	intron	ENSMUSG00000031965	NonProperStrand	110	chr2	153050783	153050799	protein_coding	Tspyl3	exon	ENSMUSG00000074671	ProperStrand	228	1	-9.4203
chr15	76340130	76340176	protein_coding	Dgat1	intron	ENSMUSG00000022555	ProperStrand	25	chr7	116664812	116664902	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	4	-13.5862
chr11	77994801	77994847	snoRNA	ENSMUSG00000064540_Snord42a	.	ENSMUSG00000064540	ProperStrand	142	chr11	97643006	97643076	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.1493
chr9	4578021	4578101	protein_coding	Gria4	intron	ENSMUSG00000025892	NonProperStrand	1	chr16	92059502	92059592	protein_coding	Mrps6	intron	ENSMUSG00000039680	NonProperStrand	5	1	-inf
chr4	43505725	43505826	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr6	28430563	28430593	protein_coding	Snd1	utr5	ENSMUSG00000001424	ProperStrand	210	15	-inf
chr8	38049667	38049683	LTR	MLT1A0	MaLR	chr8MLT1A038049422	NonProperStrand	91	chr2	156535457	156535508	protein_coding	Dlgap4	intron	ENSMUSG00000061689	ProperStrand	80	1	-11.8982
chr17	13115655	13115769	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	chr11	55296295	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-1.0898
mmu-miR-6240	2	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr17	63211482	63211498	protein_coding	Efna5	intron	ENSMUSG00000048915	NonProperStrand	32	1	-7.1521
chr5	115848210	115848227	antisense	Gm13832	.	ENSMUSG00000087292	ProperStrand	47	chr6	86476014	86476073	protein_coding	Pcbp1	utr5	ENSMUSG00000051695	ProperStrand	108	1	-12.6257
chr5	143144332	143144355	protein_coding	Wipi2	utr3	ENSMUSG00000029578	ProperStrand	49	chr5	130300420	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-4.9819
chr15	103333532	103333549	protein_coding	Pde1b	utr5	ENSMUSG00000022489	ProperStrand	19	chr16	91729699	91729723	protein_coding	Itsn1	utr5	ENSMUSG00000022957	ProperStrand	172	1	-13.5341
chr1	89681177	89681267	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	chr4	116828389	116828453	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-1.1531
chr8	125627096	125627186	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	chr7	149943490	149943570	pseudogene	Gm7290	.	ENSMUSG00000078192	ProperStrand	1	1	-inf
chr2	80300346	80300436	LINE	Lx5	L1	chr2Lx580300241	NonProperStrand	1	chr11	47014857	47014937	protein_coding	Sgcd	intron	ENSMUSG00000020354	ProperStrand	24	1	-inf
chr11	96689231	96689321	protein_coding	Nfe2l1	utr5	ENSMUSG00000038615	ProperStrand	118	chr19	8963096	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	17	-inf
chr16	58456214	58456231	protein_coding	Dcbld2	exon	ENSMUSG00000035107	NonProperStrand	8	chrX	34622931	34622958	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-7.1329
chr6	83757333	83757429	protein_coding	Paip2b	utr3	ENSMUSG00000045896	ProperStrand	19	chr4	131865964	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.7782
chr6	90181654	90181744	LINE	L1Md_F	L1	chr6L1Md_F90178856	ProperStrand	1	chr11	74712752	74712842	protein_coding	Tsr1	exon	ENSMUSG00000038335	NonProperStrand	1	1	-inf
chr5	115939529	115939595	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr1	162966815	162966860	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-1.3703
chr12	33930337	33930356	protein_coding	Atxn7l1	intron	ENSMUSG00000020564	NonProperStrand	4	chr7	116664811	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-7.9535
chr5	127737478	127737494	antisense	1700085B03Rik	.	ENSMUSG00000087104	ProperStrand	55	chr11	115869860	115869913	protein_coding	Galk1	utr3	ENSMUSG00000020766	ProperStrand	24	1	-15.3219
chr11	35853255	35853271	protein_coding	Odz2	exon	ENSMUSG00000049336	ProperStrand	106	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.9702
chrX	34667269	34667285	protein_coding	Nkap	exon	ENSMUSG00000016409	NonProperStrand	133	chr4	155022436	155022507	protein_coding	Cdk11b	exon	ENSMUSG00000029062	ProperStrand	92	1	-10.8563
chr17	34198427	34198443	protein_coding	Col11a2	exon	ENSMUSG00000024330	NonProperStrand	2	chr16	11144101	11144203	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	2	-inf
chr11	115994098	115994176	protein_coding	Mrpl38	exon	ENSMUSG00000020775	ProperStrand	25	chr7	116664818	116664908	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-4.1486
chr8	87361477	87361655	protein_coding	Rad23a	exon	ENSMUSG00000003813	ProperStrand	10	chr4	131908298	131908388	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.5892
chr12	102956633	102956650	protein_coding	Tc2n	utr5	ENSMUSG00000021187	ProperStrand	32	chr9	81949791	81949813	protein_coding	Mei4	intron	ENSMUSG00000043289	NonProperStrand	42	1	-15.2866
chr2	90235315	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	16534823	16534839	protein_coding	Ehd2	utr3	ENSMUSG00000074364	NonProperStrand	197	1	-2.3118
chr10	5990708	5990837	protein_coding	Akap12	utr3	ENSMUSG00000038587	ProperStrand	1008	chr19	22547289	22547310	protein_coding	Trpm3	intron	ENSMUSG00000052387	ProperStrand	54	1	-7.8862
chr2	28615595	28665187	protein_coding	Ak8	exon	ENSMUSG00000026807	NonProperStrand	21	chr18	33954878	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-5.5219
chr16	3856858	3856879	protein_coding	Zfp174	utr3	ENSMUSG00000054939	NonProperStrand	166	chr10	110918549	110918693	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	32	-inf
chr8	93508189	93508289	protein_coding	Chd9	exon	ENSMUSG00000056608	ProperStrand	35	chr9	64023264	64023329	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	1	-9.5295
chr5	104541258	104541275	lincRNA	Gm16990	intron	ENSMUSG00000087488	ProperStrand	1	chr10	33669020	33669120	protein_coding	Zufsp	exon	ENSMUSG00000039531	ProperStrand	9	1	-inf
chr5	100855944	100855975	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr19	8800111	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-1.4603
chr17	35384171	35384195	snoRNA	ENSMUSG00000065273_SNORD83	.	ENSMUSG00000065273	ProperStrand	244	chr8	73419680	73419741	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-3.0474
chr18	61225411	61225536	protein_coding	Pdgfrb	exon	ENSMUSG00000024620	ProperStrand	5	chr8	74239418	74239444	protein_coding	Fcho1	exon	ENSMUSG00000070000	ProperStrand	38	1	-18.4585
chrX	130496426	130496668	protein_coding	Sytl4	exon	ENSMUSG00000031255	ProperStrand	169	chr7	148634701	148634787	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-2.1475
chr10	40079395	40079412	protein_coding	Cdk19	intron	ENSMUSG00000038481	ProperStrand	34	chr7	117190045	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.3973
mmu-miR-6240	3	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr11	62418014	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	4	-1.1190
chr3	108009193	108009753	protein_coding	Atxn7l2	exon	ENSMUSG00000048997	ProperStrand	45	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-6.4104
chr9	15069885	15069901	protein_coding	Med17	exon	ENSMUSG00000031935	ProperStrand	135	chr2	130101983	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-3.8085
chr17	83901310	83901326	protein_coding	Cox7a2l	utr3	ENSMUSG00000024248	ProperStrand	8	chr1	162965539	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-11.8335
chr7	150875599	150875680	protein_coding	Osbpl5	utr3	ENSMUSG00000037606	ProperStrand	5	chr16	23111453	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-5.8178
chr11	87172190	87172206	protein_coding	Ppm1e	exon	ENSMUSG00000046442	ProperStrand	112	chr2	145076805	145209253	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-6.4847
chr9	120038467	120038552	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	chr14	63287574	63287612	snoRNA	ENSMUSG00000089531_SNORA73	.	ENSMUSG00000089531	ProperStrand	123	3	-5.1183
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr5	108334223	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	3	-1.8081
chr7	28112458	28112663	protein_coding	Ltbp4	exon	ENSMUSG00000040488	ProperStrand	91	chr7	117166753	117166843	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-4.0227
chr7	64675622	64675638	protein_coding	Gabra5	intron	ENSMUSG00000055078	NonProperStrand	2	chr1	162965980	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-inf
chr10	127995512	127995592	protein_coding	Pa2g4	utr3	ENSMUSG00000025364	ProperStrand	72	chr16	23111415	23111505	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.0185
chr11	106853256	106853350	protein_coding	Kpna2	exon	ENSMUSG00000018362	ProperStrand	70	chr19	8800461	8800478	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-3.2481
chr9	54451251	54451351	protein_coding	Idh3a	utr3	ENSMUSG00000032279	ProperStrand	8	chr11	62416586	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-9.2486
chr10	127152705	127152721	protein_coding	Myo1a	exon	ENSMUSG00000025401	ProperStrand	93	chr3	63501792	63501845	protein_coding	Plch1	exon	ENSMUSG00000036834	ProperStrand	6	1	-17.0413
chr5	69958952	69959042	protein_coding	Guf1	utr3	ENSMUSG00000029208	ProperStrand	12	chr10	90581044	90581124	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-8.0249
chr3	88711834	88715230	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr1	63225577	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	10	-17.4980
chr2	152771639	152771657	protein_coding	Dusp15	intron	ENSMUSG00000042662	ProperStrand	17	chr16	23111447	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.3471
chr2	90235286	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	5	-6.4630
chr6	57230840	57230930	LINE	Lx4A	L1	chr6Lx4A57229359	ProperStrand	2	chr6	57231173	57231263	LTR	RLTR44C	ERVK	chr6RLTR44C57230952	NonProperStrand	1	1	-inf
chr10	60692417	60692433	protein_coding	Adamts14	exon	ENSMUSG00000059901	NonProperStrand	127	chr11	69481395	69481433	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-1.9196
chr9	50670504	50670527	protein_coding	Ppp2r1b	exon	ENSMUSG00000032058	ProperStrand	22	chr16	23110965	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.8207
chr7	52381763	52381799	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	chr6	124665421	124665521	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	1	-1.6567
chr2	90235302	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	52595292	52595368	protein_coding	Ppfia3	utr3	ENSMUSG00000003863	ProperStrand	4	1	-10.0500
chr14	15572350	15572367	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr12	66067397	66067415	protein_coding	Fam179b	exon	ENSMUSG00000035614	ProperStrand	21	1	-13.4085
chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	chr8	32260333	32260372	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-0.7206
chr19	57685453	57685475	Low_complexity	GC_rich	Low_complexity	chr19GC_rich57685453	ProperStrand	13	chr17	35087894	35087960	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-8.2652
chr9	65026226	65026242	protein_coding	Igdcc3	exon	ENSMUSG00000032394	ProperStrand	17	chr11	6428089	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.6076
chr2	126578011	126578111	protein_coding	Usp8	exon	ENSMUSG00000027363	ProperStrand	40	chr16	23110527	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.1765
chr11	97863491	97863515	protein_coding	Cacnb1	utr3	ENSMUSG00000020882	ProperStrand	6	chr16	23110854	23110944	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-10.1290
chr2	28545007	28545038	protein_coding	Tsc1	utr3	ENSMUSG00000026812	ProperStrand	29	chr4	131865853	131865943	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.9946
chr1	120580959	120581049	protein_coding	Tfcp2l1	utr3	ENSMUSG00000026380	ProperStrand	158	chr15	73415754	73416465	protein_coding	Slc45a4	exon	ENSMUSG00000079020	ProperStrand	127	1	-9.8654
chr7	52382292	52382314	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	chr13	49779668	49779803	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	5	-10.7970
chr1	166192869	166193540	protein_coding	Slc19a2	exon	ENSMUSG00000040918	ProperStrand	22	chr4	122968648	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-8.2906
chr18	10052129	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr7	74189892	74189909	protein_coding	Adamts17	intron	ENSMUSG00000058145	NonProperStrand	73	1	-8.4082
chr10	68578220	68578241	LTR	MT2A	ERVL	chr10MT2A68577899	ProperStrand	21	chr9	15119647	15119968	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-7.6496
chr11	29378865	29378890	protein_coding	Ccdc88a	intron	ENSMUSG00000032740	ProperStrand	12	chr7	116663661	116663761	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-9.1969
chr15	75726305	75726719	protein_coding	Eef1d	exon	ENSMUSG00000055762	ProperStrand	99	chr17	24857717	24857765	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	4	-6.2016
chr15	10502146	10502233	protein_coding	Rai14	exon	ENSMUSG00000022246	ProperStrand	180	chr19	8799058	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-3.7283
chr10	39390642	39390660	lincRNA	E130307A14Rik	intron	ENSMUSG00000087177	ProperStrand	14	chr10	80641694	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	2	-16.6309
chr9	77316450	77320001	protein_coding	Lrrc1	exon	ENSMUSG00000032352	ProperStrand	10	chr4	131866155	131866246	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	4	-inf
chr9	121547719	121547736	protein_coding	Lyzl4	intron	ENSMUSG00000032530	NonProperStrand	10	chr7	117189865	117189920	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-9.8452
chr8	87574351	87574421	protein_coding	Tnpo2	exon	ENSMUSG00000031691	ProperStrand	92	chr1	89673601	89673691	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-2.5086
chr9	57639957	57640000	protein_coding	Arid3b	utr3	ENSMUSG00000004661	ProperStrand	39	chr11	74718982	74719009	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	2	-15.6219
chr6	115757999	115758131	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr8	73419657	73419783	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	17	-0.8089
chr14	119030317	119030363	protein_coding	Abcc4	exon	ENSMUSG00000032849	ProperStrand	137	chr3	108357389	108357479	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-3.0090
chr1	129969510	129969602	protein_coding	Zranb3	intron	ENSMUSG00000036086	ProperStrand	19	chr16	23111396	23111476	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.1411
chr10	10055839	10055855	protein_coding	9130014G24Rik	exon	ENSMUSG00000050994	ProperStrand	17	chr1	162967115	162967144	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	1	-11.2366
chr4	120726869	120726886	protein_coding	Col9a2	exon	ENSMUSG00000028626	ProperStrand	35	chr4	116827120	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-8.1186
chr7	112630313	112630330	protein_coding	Prkcdbp	exon	ENSMUSG00000037060	ProperStrand	8	chr14	76247754	76247844	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-13.2791
chr1	91358413	91791221	protein_coding	Agap1	intron	ENSMUSG00000055013	ProperStrand	229	chr19	8963036	8963169	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-1.0703
chr4	97874867	97874885	LTR	ORR1E	MaLR	chr4ORR1E97874755	NonProperStrand	2	chr15	96518637	96518737	protein_coding	Slc38a2	utr3	ENSMUSG00000022462	ProperStrand	133	1	-19.1147
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	150025157	150025173	protein_coding	Uspl1	exon	ENSMUSG00000041264	NonProperStrand	33	1	-5.6244
chr5	74489200	74489328	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr16	89789615	89994393	protein_coding	Tiam1	exon	ENSMUSG00000002489	ProperStrand	80	2	-8.3346
chr9	72590523	72591370	protein_coding	Nedd4	exon	ENSMUSG00000032216	ProperStrand	308	chr7	117189944	117190034	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-0.7997
chr2	140029360	140029386	protein_coding	2310003L22Rik	utr3	ENSMUSG00000027384	ProperStrand	8	chr7	29136576	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-6.2203
chr11	70497518	70497614	protein_coding	Camta2	exon	ENSMUSG00000040712	ProperStrand	16	chr19	8800356	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	NonProperStrand	18	1	-18.5490
chr16	20688707	20688887	protein_coding	Eif4g1	exon	ENSMUSG00000045983	ProperStrand	199	chr14	76247767	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-2.0431
chr1	26087665	26087681	LTR	RLTR13B4	ERVK	chr1RLTR13B426087538	ProperStrand	1	chr2	26494795	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-inf
chr17	32453268	32453285	protein_coding	Akap8	exon	ENSMUSG00000024045	ProperStrand	339	chr4	32822454	32822535	protein_coding	Mdn1	exon	ENSMUSG00000058006	ProperStrand	184	1	-7.6056
chr2	121250343	121260633	protein_coding	Pdia3	exon	ENSMUSG00000027248	ProperStrand	74	chr7	116663664	116663754	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	7	-15.8129
chr11	120819991	120820011	protein_coding	Slc16a3	utr3	ENSMUSG00000025161	ProperStrand	98	chr5	108336375	108336495	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-3.9471
chr14	17241822	17242343	protein_coding	Top2b	exon	ENSMUSG00000017485	ProperStrand	24	chr11	69481335	69481437	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-4.9335
chr2	69421147	69421165	protein_coding	Lrp2	intron	ENSMUSG00000027070	NonProperStrand	8	chr7	116663692	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-6.3908
chr10	127181751	127181767	protein_coding	Zbtb39	utr3	ENSMUSG00000044617	NonProperStrand	6	chr15	79913292	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-13.3721
chr11	80707576	80707593	protein_coding	Accn1	exon	ENSMUSG00000020704	ProperStrand	69	chr14	76247741	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	5	-16.1431
chr11	5006405	5006495	protein_coding	Emid1	utr3	ENSMUSG00000034164	ProperStrand	14	chr7	116664794	116664874	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-5.2856
chr18	85147984	85148043	protein_coding	Fbxo15	intron	ENSMUSG00000034391	ProperStrand	23	chr16	23110986	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.4133
chr11	30043125	30043142	protein_coding	Spnb2	exon	ENSMUSG00000020315	ProperStrand	103	chr12	60141409	60141509	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-5.7641
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr18	82773672	82773688	protein_coding	Zfp236	exon	ENSMUSG00000041258	NonProperStrand	117	2	-11.6493
chr7	29683429	29683491	protein_coding	Actn4	exon	ENSMUSG00000054808	ProperStrand	120	chr9	15119722	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.5126
chr1	115800685	115800722	lincRNA	9330185C12Rik	intron	ENSMUSG00000086520	ProperStrand	45	chr4	131908688	131908745	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.6382
chr12	110888803	110888903	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr17	24665480	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-1.0039
chr11	32635308	32635327	protein_coding	Fbxw11	exon	ENSMUSG00000020271	NonProperStrand	31	chr8	44387250	44387350	protein_coding	Zfp42	intron	ENSMUSG00000051176	ProperStrand	127	1	-13.1436
chr19	34999238	34999254	protein_coding	Kif20b	exon	ENSMUSG00000024795	NonProperStrand	28	chr9	120038610	120038669	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.4612
chr2	120835956	120836046	protein_coding-noncoding	Ccndbp1	utr5	ENSMUSG00000023572	ProperStrand	5	chr2	158182215	158182277	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	5	-inf
chr6	55013175	55019456	protein_coding	Gars	exon	ENSMUSG00000029777	ProperStrand	71	chr18	35716763	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-5.2927
chr11	119142028	119142098	protein_coding	Gaa	intron	ENSMUSG00000025579	ProperStrand	149	chr15	34370545	34370613	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-3.5630
chr2	127953343	127953361	protein_coding-noncoding	Bcl2l11	utr5	ENSMUSG00000027381	NonProperStrand	17	chr7	29136575	29136631	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.6910
chr5	74489202	74489292	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr8	109069039	109069079	protein_coding	Cdh3	exon	ENSMUSG00000061048	ProperStrand	62	6	-inf
chr2	26493487	26493518	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chrX	139271373	139271389	protein_coding	Tmem164	utr3	ENSMUSG00000047045	NonProperStrand	29	1	-7.6444
chr7	118204537	118204627	SINE	B1_Mus1	Alu	chr7B1_Mus1118204517	NonProperStrand	1	chr7	118204379	118204469	SINE	B3A	B2	chr7B3A118204323	NonProperStrand	1	1	-inf
chr4	128892545	128892617	protein_coding	Yars	exon	ENSMUSG00000028811	ProperStrand	131	chr1	162968212	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-5.2833
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	15514257	15514276	protein_coding	Slc36a4	exon	ENSMUSG00000043885	ProperStrand	94	2	-6.1339
chr14	68318252	68318361	protein_coding	Cdca2	exon	ENSMUSG00000048922	ProperStrand	50	chr9	15118332	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.8047
chrX	71553512	71554416	protein_coding	Gdi1	exon	ENSMUSG00000015291	ProperStrand	24	chr4	131908717	131908797	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.6746
chr7	150410741	150410820	protein_coding	Kcnq1	intron	ENSMUSG00000009545	ProperStrand	59	chr17	24857721	24857811	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.3250
chr4	120818865	120843365	protein_coding	Rlf	exon	ENSMUSG00000049878	ProperStrand	58	chr4	131866155	131866245	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-6.3113
chr11	51457952	51458677	protein_coding	N4bp3	exon	ENSMUSG00000001053	ProperStrand	45	chr9	120038632	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	4	-11.9180
chr16	23110708	23111200	protein_coding	Eif4a2	exon	ENSMUSG00000022884	ProperStrand	356	chr13	51743568	51743648	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	7	-20.3209
chr5	143666428	143666972	protein_coding	Actb	exon	ENSMUSG00000029580	NonProperStrand	7	chr11	6520370	6520460	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	NonProperStrand	6	3	-19.5001
chr9	5303766	5304194	protein_coding	Casp1	exon	ENSMUSG00000025888	ProperStrand	1	chr16	23111708	23111753	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-inf
chr1	36564290	36564319	protein_coding	Cnnm4	utr3	ENSMUSG00000037408	ProperStrand	12	chr1	74902715	74902731	protein_coding	Cdk5r2	exon	ENSMUSG00000090071	NonProperStrand	49	1	-17.1242
chr8	73862854	73872612	protein_coding	Myo9b	exon	ENSMUSG00000004677	ProperStrand	78	chr16	23110920	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-3.1879
chr11	77523788	77523873	protein_coding	Nufip2	utr3	ENSMUSG00000037857	ProperStrand	36	chr18	33954817	33954907	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-4.4678
chr8	106760521	106760596	protein_coding	Tk2	intron	ENSMUSG00000035824	ProperStrand	3	chr2	130102004	130102094	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-11.6725
chr7	13516165	13516190	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr9	15119387	15119425	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-1.1151
chr3	148500193	148500211	protein_coding	Lphn2	intron	ENSMUSG00000028184	ProperStrand	20	chr4	21737945	21737961	protein_coding	Usp45	exon	ENSMUSG00000040455	ProperStrand	40	1	-16.3729
chr5	102265178	102265227	protein_coding	Wdfy3	utr3	ENSMUSG00000043940	ProperStrand	45	chr15	82980193	82980227	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	2	-12.3500
chr4	83938956	83939046	protein_coding	Bnc2	exon	ENSMUSG00000028487	ProperStrand	76	chrX	34622910	34622990	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	7	-18.3994
chr11	95824055	95824155	protein_coding	Igf2bp1	utr3	ENSMUSG00000013415	ProperStrand	140	chr15	82980145	82980189	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-5.4710
chr15	86065168	86065953	protein_coding	Tbc1d22a	exon	ENSMUSG00000051864	ProperStrand	15	chr18	35716855	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.7126
chr1	117964328	117964353	protein_coding	Cntnap5a	intron	ENSMUSG00000070695	ProperStrand	11	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-4.7202
chr19	8626488	8626505	LTR	RLTR8	ERVK	chr19RLTR88626145	NonProperStrand	1	chr15	83763505	83763521	protein_coding	Efcab6	exon	ENSMUSG00000022441	NonProperStrand	5	1	-inf
chr7	117190017	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	NonProperStrand	17	chr16	23110454	23110508	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	NonProperStrand	16	1	-19.0665
chr11	96662139	96662200	protein_coding	Cbx1	exon	ENSMUSG00000018666	ProperStrand	14	chr16	23109051	23109085	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-10.2305
chr8	26933176	26933236	protein_coding	Ash2l	exon	ENSMUSG00000031575	ProperStrand	113	chr18	35714194	35714254	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-2.3277
chr12	60093114	60093179	protein_coding	Sec23a	exon	ENSMUSG00000020986	ProperStrand	16	chr2	120872244	120872260	protein_coding	Tgm5	exon	ENSMUSG00000053675	NonProperStrand	163	1	-13.9993
chr5	121655806	121657560	protein_coding	Rpl6	intron	ENSMUSG00000029614	ProperStrand	332	chr7	117189957	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	15	-20.2870
chr8	87366920	87367986	protein_coding	Calr	exon	ENSMUSG00000003814	ProperStrand	232	chr7	116664862	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-1.3277
chr2	102143520	102143620	protein_coding	Trim44	utr3	ENSMUSG00000027189	ProperStrand	26	chr1	39605591	39605631	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	2	-14.3546
chr9	67065676	67065694	protein_coding	Tln2	utr3	ENSMUSG00000052698	ProperStrand	79	chr18	35714217	35714262	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-5.1004
chr9	74101571	74101592	protein_coding	Wdr72	intron	ENSMUSG00000044976	NonProperStrand	12	chr19	8798484	8798531	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-13.5463
chr4	114732494	114732511	protein_coding	Tal1	intron	ENSMUSG00000028717	NonProperStrand	69	chr5	108333615	108333662	snoRNA	ENSMUSG00000064453_Snord21	.	ENSMUSG00000064453	ProperStrand	201	1	-10.6073
chr1	90162870	90162960	protein_coding	Hjurp	exon	ENSMUSG00000044783	ProperStrand	110	chr5	74489543	74489623	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-2.6837
chr2	75503162	75503307	protein_coding	Hnrnpa3	exon	ENSMUSG00000059005	ProperStrand	289	chr5	130300477	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	4	-2.5249
chr7	13511960	13512006	protein_coding	Rps5	utr3	ENSMUSG00000012848	ProperStrand	108	chr19	8800381	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-2.4844
chr17	35822058	35822257	protein_coding	Ddr1	exon	ENSMUSG00000003534	ProperStrand	129	chr8	87525135	87525238	protein_coding	Hook2	exon	ENSMUSG00000052566	ProperStrand	204	1	-9.3237
chr17	26347568	26347640	protein_coding	Rgs11	exon	ENSMUSG00000024186	ProperStrand	4	chr4	131865413	131865503	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	4	-inf
chr16	34549713	34549731	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	chr12	106269396	106269486	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	4	-9.4226
chr16	37384897	37384913	protein_coding	Stxbp5l	utr5	ENSMUSG00000022829	ProperStrand	332	chr1	88252837	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-3.3609
chr4	132530099	132530117	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	chr2	32818886	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-2.0813
chr11	120421738	120422097	protein_coding	P4hb	utr3	ENSMUSG00000025130	ProperStrand	83	chr17	13112531	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	2	-6.6650
chr5	67066830	67066846	antisense	Gm16832	.	ENSMUSG00000087601	ProperStrand	8	chr18	35714143	35714244	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-7.4301
chr10	5991315	5991387	protein_coding	Akap12	exon	ENSMUSG00000038587	ProperStrand	1008	chr19	8800085	8800110	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-2.2791
chr12	87865704	87865722	SINE	RSINE1	B4	chr12RSINE187865630	ProperStrand	36	chr7	116663632	116663759	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-5.8578
chr4	117811168	117811476	protein_coding	Kdm4a	exon	ENSMUSG00000033326	ProperStrand	81	chr10	82112944	82112991	protein_coding	Tdg	utr3	ENSMUSG00000034674	ProperStrand	42	1	-13.4286
chr18	9393982	9394000	protein_coding	Ccny	intron	ENSMUSG00000024286	NonProperStrand	7	chr2	166889032	166889056	snoRNA	ENSMUSG00000077515_SNORD12	.	ENSMUSG00000077515	ProperStrand	191	1	-15.4229
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	120288388	120288407	protein_coding	Msrb3	intron	ENSMUSG00000051236	ProperStrand	24	1	-6.2570
chr10	82456766	82456784	protein_coding	Chst11	intron	ENSMUSG00000034612	ProperStrand	170	chr5	54031304	54031426	protein_coding	Rbpj	intron	ENSMUSG00000039191	ProperStrand	96	1	-10.2795
chr13	9833551	9833651	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr14	49277599	49277624	protein_coding	Otx2	utr3	ENSMUSG00000021848	ProperStrand	19	1	-7.2350
chr4	43505656	43505681	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr8	83243689	83244626	protein_coding	Smarca5	exon	ENSMUSG00000031715	ProperStrand	115	1	-1.9620
chr13	112540780	112541440	protein_coding	Map3k1	exon	ENSMUSG00000021754	ProperStrand	113	chr6	57638553	57638569	protein_coding	Pigy	utr3	ENSMUSG00000043162	NonProperStrand	18	1	-14.4912
chr14	31953025	31953118	protein_coding	Stab1	exon	ENSMUSG00000042286	NonProperStrand	127	chr7	29136525	29136575	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.2139
chr16	4886395	4886411	protein_coding	Mgrn1	exon	ENSMUSG00000022517	NonProperStrand	157	chr9	78326836	78326892	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-4.4655
chr1	155287310	155287355	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	chr13	49779704	49779804	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	2	-4.9952
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr2	4974190	4974207	protein_coding	Optn	exon	ENSMUSG00000026672	ProperStrand	451	2	-3.8857
chr5	34986617	34986707	protein_coding	Nop14	exon	ENSMUSG00000036693	ProperStrand	35	chr3	108357338	108357418	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-5.5876
chr16	57391760	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr7	54110716	54110836	protein_coding	Ldha	utr3	ENSMUSG00000063229	ProperStrand	280	1	-4.7699
chr8	83312953	83312972	protein_coding	Gab1	exon	ENSMUSG00000031714	ProperStrand	72	chr1	59761635	59761702	snoRNA	ENSMUSG00000089093_Snord11	.	ENSMUSG00000089093	ProperStrand	193	1	-10.6031
chrX	5699762	5699781	LTR	RLTR18	ERVK	chrXRLTR185699653	NonProperStrand	1	chr15	76078356	76078388	protein_coding	Grina	exon	ENSMUSG00000022564	ProperStrand	18	1	-inf
chr5	118520520	118527593	protein_coding	Fbxw8	exon	ENSMUSG00000032867	ProperStrand	61	chr15	78939631	78939647	protein_coding	Micall1	utr5	ENSMUSG00000033039	ProperStrand	48	1	-13.7294
chr16	98168829	98168846	protein_coding	Zfp295	utr3	ENSMUSG00000046962	ProperStrand	63	chr9	120038467	120038530	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.9519
chr15	76010437	76010453	protein_coding	Plec	exon	ENSMUSG00000022565	ProperStrand	186	chr7	52715031	52715054	protein_coding	Ftl1	utr5	ENSMUSG00000050708	ProperStrand	807	1	-5.8771
chr8	14975976	14977551	protein_coding	Arhgef10	exon	ENSMUSG00000071176	ProperStrand	22	chr4	131908809	131908871	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.8292
chr9	15130911	15130981	snoRNA	ENSMUSG00000077394_snoU2_19	.	ENSMUSG00000077394	ProperStrand	96	chr3	68889052	68889142	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-2.4301
chr11	113513363	113513379	protein_coding	Cog1	exon	ENSMUSG00000018661	NonProperStrand	38	chr17	24856667	24856753	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-7.3363
chr17	5243068	5264046	protein_coding	Arid1b	exon	ENSMUSG00000069729	ProperStrand	28	chr11	69483136	69483254	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-9.4672
chr5	136363828	136363866	protein_coding	Hspb1	utr5	ENSMUSG00000004951	ProperStrand	25	chr10	79179603	79179621	protein_coding	Hcn2	exon	ENSMUSG00000020331	NonProperStrand	4	1	-19.5900
chr5	37503955	37504055	protein_coding	Jakmip1	intron	ENSMUSG00000063646	ProperStrand	21	chr9	120037988	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	2	-10.9794
chr9	95677131	95677175	protein_coding	Pls1	exon	ENSMUSG00000049493	ProperStrand	6	chr16	23111451	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-9.1716
chrX	74764640	74764704	protein_coding	Tbl1x	intron	ENSMUSG00000025246	ProperStrand	56	chr17	24857748	24857838	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	9	-19.3691
chr7	116681812	116681839	protein_coding	St5	exon	ENSMUSG00000031024	ProperStrand	42	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-2.3773
chr13	21845294	21845359	protein_coding	Hist1h2ak	utr3	ENSMUSG00000063021	ProperStrand	30	chr7	118219574	118219597	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-9.0478
chr19	8798523	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	chr13	90238584	90238666	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	3	-3.5986
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr5	121655016	121655153	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	5	-1.7456
chr17	35294110	35294364	protein_coding	Prrc2a	exon	ENSMUSG00000024393	ProperStrand	315	chr5	77390267	77390309	protein_coding	Paics	exon	ENSMUSG00000029247	ProperStrand	78	1	-9.4637
chr9	70350797	70350887	protein_coding	Rnf111	utr5	ENSMUSG00000032217	ProperStrand	33	chr7	29136526	29136606	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.4248
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr4	41673405	41673421	protein_coding	Il11ra1	intron	ENSMUSG00000073889	ProperStrand	128	1	-6.2928
chr7	149268596	149268613	protein_coding	Dusp8	exon	ENSMUSG00000037887	NonProperStrand	7	chr10	110918634	110918687	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-7.7211
chr8	125418802	125418818	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	chr15	98356806	98356900	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	2	-6.9404
chr2	127949373	127949389	protein_coding	Acoxl	utr3	ENSMUSG00000027380	ProperStrand	8	chr11	69483136	69483194	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-6.3191
chr9	118983609	118983763	protein_coding	Plcd1	exon	ENSMUSG00000010660	ProperStrand	15	chr7	107065549	107065565	protein_coding	Xrra1	exon	ENSMUSG00000035211	NonProperStrand	24	1	-18.1996
chr11	22896437	22897074	protein_coding	Cct4	exon	ENSMUSG00000007739	ProperStrand	81	chr11	69870769	69870785	protein_coding	Asgr1	exon	ENSMUSG00000020884	NonProperStrand	145	1	-10.9388
chr12	58691976	58691992	antisense	4921518K17Rik	.	ENSMUSG00000085851	ProperStrand	75	chr11	98878387	98878468	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-5.8454
chr4	99500513	99500549	protein_coding	Itgb3bp	intron	ENSMUSG00000028549	NonProperStrand	5	chr16	23110873	23110900	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-11.1940
chr19	10289286	10289376	protein_coding	Gm98	exon	ENSMUSG00000036098	ProperStrand	26	chr4	131865856	131865936	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	6	-17.5642
chr6	45494576	45494594	protein_coding	Cntnap2	intron	ENSMUSG00000039419	NonProperStrand	283	chr12	77176761	77176854	protein_coding	Syne2	exon	ENSMUSG00000063450	ProperStrand	63	1	-10.1062
chr4	120225612	120226561	protein_coding	Ctps	exon	ENSMUSG00000028633	NonProperStrand	24	chr5	108334195	108334285	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-6.6252
chr13	113342177	113342193	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	chr2	158204033	158204093	snoRNA	ENSMUSG00000065840_SNORA71	.	ENSMUSG00000065840	ProperStrand	107	1	-7.6080
chr5	32657192	32657208	protein_coding	Plb1	exon	ENSMUSG00000029134	ProperStrand	50	chr5	112865459	112865476	protein_coding	Sez6l	exon	ENSMUSG00000058153	ProperStrand	81	1	-13.0793
chr19	30249800	30249816	protein_coding	Gldc	utr5	ENSMUSG00000024827	ProperStrand	175	chr19	6058562	6059174	protein_coding	Fau	exon	ENSMUSG00000038274	ProperStrand	64	1	-11.0354
chr8	72818622	72818712	protein_coding-noncoding	Ddx49	utr3	ENSMUSG00000057788	ProperStrand	1	chr8	72818849	72818929	protein_coding	Ddx49	intron	ENSMUSG00000057788	ProperStrand	68	1	-inf
chr9	15121017	15121088	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	chr19	8798507	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-3.5302
chr3	87718042	87718087	protein_coding	Hdgf	exon	ENSMUSG00000004897	ProperStrand	117	chr9	15121001	15121062	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	5	-18.6843
chr17	31984059	31984139	protein_coding	Sik1	exon	ENSMUSG00000024042	ProperStrand	55	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-6.4489
chr1	88967799	88967889	LTR	ORR1A2	MaLR	chr1ORR1A288967636	NonProperStrand	1	chr1	88970959	88971039	SINE	B2_Mm2	B2	chr1B2_Mm288970972	ProperStrand	1	1	-inf
chr3	19131060	19201645	protein_coding	Pde7a	exon	ENSMUSG00000069094	ProperStrand	12	chr16	23110967	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-15.8439
chr10	75102686	75102786	protein_coding	Susd2	exon	ENSMUSG00000006342	ProperStrand	16	chr16	23111777	23111828	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-10.5086
chr1	136403642	136403659	protein_coding	Rabif	utr3	ENSMUSG00000042229	ProperStrand	20	chr7	116664794	116664869	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-7.6618
chr2	71248217	71248239	protein_coding	Hat1	exon	ENSMUSG00000027018	ProperStrand	53	chr4	116828379	116828451	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-8.6310
chr2	83493585	83497187	protein_coding	Zc3h15	exon	ENSMUSG00000027091	ProperStrand	37	chr15	79913288	79913313	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.5050
chr10	127525210	127525299	protein_coding-noncoding	Atp5b	utr5	ENSMUSG00000025393	ProperStrand	1	chr11	97642952	97643014	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-inf
chr1	106298024	106298114	LTR	MT-int	MaLR	chr1MT-int106297984	NonProperStrand	1	chr19	33620468	33620548	protein_coding	Lipo1	intron	ENSMUSG00000024766	ProperStrand	8	1	-inf
chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	chr1	89681145	89681165	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-1.0089
chr6	130520483	130520563	LINE	Lx	L1	chr6Lx130520457	NonProperStrand	1	chr6	130729017	130729107	LINE	Lx	L1	chr6Lx130728869	NonProperStrand	1	1	-inf
chr7	133263828	133263886	protein_coding-noncoding	Xpo6	utr3	ENSMUSG00000000131	ProperStrand	4	chr16	23110921	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.6489
chr6	70794802	70794820	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chr3	88497861	88497949	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-5.6004
chr13	64470336	64470380	protein_coding	Ctsl	exon	ENSMUSG00000021477	ProperStrand	44	chr6	117873877	117873947	protein_coding	Hnrnpf	exon	ENSMUSG00000042079	ProperStrand	147	2	-20.3318
chrX	98901421	98901458	SINE	B1_Mus1	Alu	chrXB1_Mus198901335	NonProperStrand	6	chr4	131865856	131865946	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-14.8674
chr14	118303940	118303958	protein_coding	Gpc6	intron	ENSMUSG00000058571	NonProperStrand	31	chr17	13112529	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-5.8680
chr11	51551344	51551424	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	chr3	68889026	68889116	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	5	-0.9007
chr4	131908686	131908708	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr19	8800084	8800144	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-1.9379
chr5	118376503	118376519	protein_coding	Nos1	exon	ENSMUSG00000029361	NonProperStrand	237	chr17	35089226	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-2.9077
chr8	125418803	125418819	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	chr6	38576959	38577033	protein_coding	Klrg2	utr3	ENSMUSG00000071537	ProperStrand	4	1	-15.2967
chr13	13601762	13602262	protein_coding	Nid1	exon	ENSMUSG00000005397	ProperStrand	112	chr11	102721393	102723952	protein_coding	Eftud2	exon	ENSMUSG00000020929	ProperStrand	86	7	-inf
chr17	35289693	35299168	protein_coding	Prrc2a	exon	ENSMUSG00000024393	ProperStrand	315	chr7	116663639	116663761	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-1.4399
chr11	63885336	63887052	protein_coding	Cox10	exon	ENSMUSG00000042148	NonProperStrand	187	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-1.6539
chr3	132754742	132754790	protein_coding	Gstcd	intron	ENSMUSG00000028018	ProperStrand	4	chr10	23505152	23505234	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-6.2798
chr10	30540750	30540768	LTR	IAPLTR1a_Mm	ERVK	chr10IAPLTR1a_Mm30540551	ProperStrand	1	chr5	108334210	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-inf
chr13	47193553	47193643	protein_coding	Dek	exon	ENSMUSG00000021377	ProperStrand	36	chr10	90581057	90581137	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-5.8046
chr4	12725576	12725592	DNA	MER103	DNA	chr4MER10312725508	NonProperStrand	2	chr2	121837355	121837371	protein_coding	Ctdspl2	utr3	ENSMUSG00000033411	NonProperStrand	3	1	-inf
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr13	20374830	20396994	protein_coding	Elmo1	exon	ENSMUSG00000041112	NonProperStrand	34	2	-9.1230
chr8	98269989	98270089	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	chr19	8800085	8800152	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	5	-5.1223
chr15	99161550	99161573	protein_coding	Fmnl3	intron	ENSMUSG00000023008	ProperStrand	13	chr1	134901272	134907649	protein_coding	Mdm4	exon	ENSMUSG00000054387	ProperStrand	95	3	-21.2625
chrX	110199427	110199517	protein_coding	Chm	intron	ENSMUSG00000025531	ProperStrand	9	chr19	8963083	8963163	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.8692
chr2	94246319	94246338	lincRNA	2810002D19Rik	exon	ENSMUSG00000045464	ProperStrand	2	chr10	90581034	90581138	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	2	-inf
chr11	98878386	98878466	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	chr9	64023238	64023328	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	1	-1.8232
mmu-miR-1291	0	26	miRNA	mmu-miR-1291	.	mmu-miR-1291	ProperStrand	103	chr15	98350145	98350267	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	72	-26.8794
chr16	38089975	38089992	protein_coding	Gsk3b	utr5	ENSMUSG00000022812	ProperStrand	80	chr11	51551280	51551338	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	1	-7.1266
chr12	71146391	71146407	protein_coding	Nin	exon	ENSMUSG00000021068	ProperStrand	95	chr5	108648228	108648257	protein_coding	Ccdc18	intron	ENSMUSG00000056531	ProperStrand	27	1	-14.0071
chr16	23110991	23111010	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr3	68889026	68889126	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	4	-2.0512
chr3	88715213	88715230	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr1	89681256	89681329	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	2	-1.1005
chr6	54955545	54955561	LINE	L1MB5	L1	chr6L1MB554955154	ProperStrand	1	chr4	131908831	131908896	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-inf
chr16	18794935	18795226	protein_coding	Cdc45	exon	ENSMUSG00000000028	ProperStrand	28	chr16	43886835	43886930	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	1	-9.6101
chr19	46433589	46433639	snoRNA	ENSMUSG00000065204_SNORA32	.	ENSMUSG00000065204	ProperStrand	20	chr2	130101987	130102087	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	4	-19.1354
chr19	47173345	47175554	protein_coding	Pdcd11	exon	ENSMUSG00000025047	ProperStrand	137	chr17	24665449	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	2	-5.7714
chr11	77889558	77889611	protein_coding	Eral1	intron	ENSMUSG00000020832	ProperStrand	8	chr6	115757993	115758093	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	4	-19.0953
chr2	166860040	166860191	protein_coding	Ddx27	utr3	ENSMUSG00000017999	ProperStrand	55	chr16	23111430	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-4.1403
chr6	3540204	3540221	protein_coding	Ccdc132	intron	ENSMUSG00000001376	NonProperStrand	5	chr8	124474559	124474576	protein_coding	Banp	intron	ENSMUSG00000025316	NonProperStrand	34	1	-18.9946
chr2	168575852	168575953	protein_coding	Sall4	exon	ENSMUSG00000027547	ProperStrand	82	chr11	86517489	86517617	protein_coding	Cltc	exon	ENSMUSG00000047126	ProperStrand	319	1	-9.3383
chr12	56404814	56404830	protein_coding	1110008L16Rik	utr5	ENSMUSG00000021023	NonProperStrand	10	chr4	140749731	140751147	protein_coding	Fbxo42	exon	ENSMUSG00000028920	ProperStrand	91	1	-16.1210
chr3	100743423	100743445	protein_coding	Ttf2	utr3	ENSMUSG00000033222	ProperStrand	50	chr10	23506278	23506312	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-7.3105
chr2	164664795	164664842	protein_coding	Ctsa	utr3	ENSMUSG00000017760	ProperStrand	36	chr7	52263666	52263682	protein_coding	Scaf1	exon	ENSMUSG00000038406	ProperStrand	81	1	-13.7470
chr7	52958453	52958469	protein_coding	Car11	exon	ENSMUSG00000003273	NonProperStrand	250	chr5	121655016	121655100	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-1.3535
chr2	10392676	10392742	protein_coding	Sfmbt2	intron	ENSMUSG00000061186	ProperStrand	17	chr16	23111417	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.3471
chr11	59888156	59888174	LTR	MLT1D	MaLR	chr11MLT1D59888103	NonProperStrand	1	chr7	116663633	116663657	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-inf
chr13	6604292	6604936	protein_coding	Pfkp	exon	ENSMUSG00000021196	ProperStrand	197	chr7	116663650	116663730	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-0.7785
chr5	135857463	135857557	protein_coding	Pom121	exon	ENSMUSG00000053293	ProperStrand	127	chr7	148634808	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	4	-9.3277
chr2	174259069	174259094	protein_coding	Ctsz	exon	ENSMUSG00000016256	ProperStrand	13	chr3	68889026	68889085	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-6.2197
chr1	138382212	138382230	protein_coding	Kif14	intron	ENSMUSG00000041498	NonProperStrand	36	chr11	97642952	97643089	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-5.7919
chr15	84101747	84103941	protein_coding	Parvb	exon	ENSMUSG00000022438	ProperStrand	127	chr6	4940091	4940107	protein_coding	Ppp1r9a	intron	ENSMUSG00000032827	ProperStrand	50	1	-12.1754
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr3	96654255	96654271	protein_coding	Pdzk1	exon	ENSMUSG00000038298	ProperStrand	101	1	-3.4865
chr16	22265863	22265879	protein_coding	Tra2b	utr5	ENSMUSG00000022858	ProperStrand	32	chr4	44025717	44025779	protein_coding	Clta	exon	ENSMUSG00000028478	ProperStrand	59	1	-14.6117
chr8	113513505	113514388	protein_coding	Ddx19a	exon	ENSMUSG00000015023	ProperStrand	21	chr16	23110896	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.5481
chr7	88489430	88489446	protein_coding	Rps17	intron	ENSMUSG00000061787	ProperStrand	105	chr7	29136525	29136610	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.4808
chr9	108199327	108199343	protein_coding	Amt	exon	ENSMUSG00000032607	NonProperStrand	1	chr4	131908809	131908871	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-inf
chr18	60988149	60988212	protein_coding	Tcof1	exon	ENSMUSG00000024613	ProperStrand	68	chr16	23110530	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	4	-8.3464
chr12	88778631	88778752	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	chr19	17900100	17900117	snoRNA	ENSMUSG00000089540_snoU13	.	ENSMUSG00000089540	ProperStrand	99	1	-5.5138
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	4	-6.9687
chr11	55208675	55208693	protein_coding	Sparc	utr3	ENSMUSG00000018593	ProperStrand	48	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-9.4276
chr18	36426302	36426320	SINE	B3	B2	chr18B336426278	ProperStrand	1	chr5	108334210	108334276	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-inf
chr4	147385125	147385141	protein_coding	Clcn6	exon	ENSMUSG00000029016	ProperStrand	120	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-10.2936
chr7	52844954	52844986	protein_coding	Bcat2	utr3	ENSMUSG00000030826	ProperStrand	24	chr16	23111429	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-4.7906
chr2	158451026	158451043	protein_coding	Actr5	exon	ENSMUSG00000037761	NonProperStrand	94	chr1	142378711	142378727	protein_coding	Kcnt2	intron	ENSMUSG00000052726	ProperStrand	4	1	-17.9446
chr19	43575013	43575103	protein_coding	Got1	intron	ENSMUSG00000025190	ProperStrand	32	chr15	34370550	34370630	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-4.7407
chr9	58372916	58372932	protein_coding	Cd276	utr3	ENSMUSG00000035914	ProperStrand	19	chr11	6428108	6428169	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.3857
chr3	62287487	62304783	protein_coding	Dhx36	exon	ENSMUSG00000027770	ProperStrand	16	chr4	131908234	131908355	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	8	-19.7139
chr9	15119665	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	chr10	30530983	30531020	tRNA	tRNA81-GluCTC	.	93642	ProperStrand	154	5	-6.8678
chr7	138735865	138735881	protein_coding	Fgfr2	intron	ENSMUSG00000030849	NonProperStrand	95	chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-5.5512
chrX	166421984	166422948	protein_coding	Mid1	exon	ENSMUSG00000035299	ProperStrand	209	chr8	73419657	73419718	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-2.2052
chr3	85944538	85944556	snoRNA	ENSMUSG00000064390_Rnu73b	.	ENSMUSG00000064390	ProperStrand	164	chr1	89673685	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-1.5804
chr12	114290175	114290191	protein_coding	Pacs2	intron	ENSMUSG00000021143	NonProperStrand	302	chr16	30982708	30982760	protein_coding	AI480653	intron	ENSMUSG00000047434	ProperStrand	29	1	-11.5444
chr1	141373476	141374019	protein_coding	Aspm	exon	ENSMUSG00000033952	ProperStrand	64	chr9	15119646	15119730	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	9	-19.1142
chr8	124066021	124066038	protein_coding	Gm20388	intron	ENSMUSG00000092329	NonProperStrand	203	chr2	158185590	158185652	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-4.1255
chr11	120440092	120440172	protein_coding	Arhgdia	utr3	ENSMUSG00000025132	ProperStrand	39	chr12	106269284	106269374	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-4.9669
chr14	56159295	56159311	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	chr16	94102129	94102147	protein_coding	Sim2	intron	ENSMUSG00000062713	NonProperStrand	3	1	-17.5951
chr7	125880423	125880440	protein_coding	6330503K22Rik	utr3	ENSMUSG00000033904	NonProperStrand	4	chr19	9047462	9047544	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	2	-inf
chr17	46758511	46758527	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr9	53475183	53475200	protein_coding	Cul5	utr5	ENSMUSG00000032030	ProperStrand	87	1	-8.4865
chr13	9833554	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chrX	148324223	148351417	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	2	-2.4330
chr2	90235297	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	125157590	125157607	protein_coding	Fbn1	intron	ENSMUSG00000027204	NonProperStrand	32	2	-9.3066
chr4	106472505	106472522	protein_coding	Acot11	intron	ENSMUSG00000034853	ProperStrand	61	chr3	123210947	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.0395
chr2	3121631	3121717	protein_coding	Fam171a1	intron	ENSMUSG00000050530	ProperStrand	12	chr10	23505150	23505209	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.9771
chr18	60936138	60936203	protein_coding	Rps14	exon	ENSMUSG00000024608	ProperStrand	154	chr11	48615577	48615609	snoRNA	ENSMUSG00000064725_Snord96a	.	ENSMUSG00000064725	ProperStrand	89	1	-10.6292
chr11	69466400	69466440	protein_coding	Fxr2	utr3	ENSMUSG00000018765	ProperStrand	40	chr1	189146165	189146198	protein_coding	Gpatch2	exon	ENSMUSG00000039210	ProperStrand	11	1	-17.5153
chrX	7752870	7752886	protein_coding	Tbc1d25	exon	ENSMUSG00000039201	ProperStrand	126	chr18	77912799	77912817	protein_coding	8030462N17Rik	exon	ENSMUSG00000047466	ProperStrand	17	1	-14.3901
chr11	51551280	51551333	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	chr4	132394364	132394464	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	6	-18.8339
chr5	128938781	128938798	protein_coding	Tmem132d	utr5	ENSMUSG00000034310	ProperStrand	20	chr9	15119744	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.6697
chr7	4475368	4475384	protein_coding	6030429G01Rik	exon	ENSMUSG00000055809	NonProperStrand	1	chr12	110923173	110923226	snoRNA	ENSMUSG00000084487_SNORD113	.	ENSMUSG00000084487	ProperStrand	183	1	-inf
chrX	20258584	20258608	protein_coding	Uba1	exon	ENSMUSG00000001924	ProperStrand	156	chr10	120709244	120712786	protein_coding	Tbc1d30	exon	ENSMUSG00000052302	ProperStrand	233	1	-8.6792
chr10	80118878	80118968	protein_coding	Btbd2	exon	ENSMUSG00000003344	ProperStrand	68	chr4	131865856	131865936	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.5775
chr16	86962953	86962970	LINE	Lx9	L1	chr16Lx986962556	ProperStrand	1	chr2	33587684	33587790	protein_coding	Fam125b	utr3	ENSMUSG00000038740	ProperStrand	28	1	-inf
chr1	93001847	93001864	protein_coding	Lrrfip1	exon	ENSMUSG00000026305	ProperStrand	26	chr3	151858165	151858191	protein_coding	Dnajb4	intron	ENSMUSG00000028035	ProperStrand	6	2	-19.8640
chr7	133939491	133939516	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	chr19	8799845	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	3	-2.7195
chr10	70033608	70033625	protein_coding	Phyhipl	exon	ENSMUSG00000037747	ProperStrand	8	chr9	120039569	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	3	-16.9057
chr1	168310422	168310512	protein_coding	Tada1	intron	ENSMUSG00000026563	ProperStrand	1	chr1	167361096	167361186	protein_coding	Dcaf6	intron	ENSMUSG00000026571	NonProperStrand	3	1	-inf
chr13	21872156	21872192	protein_coding	Hist1h1b	exon	ENSMUSG00000058773	ProperStrand	65	chr9	15119648	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.4918
chr8	27062446	27062463	protein_coding	Hgsnat	exon	ENSMUSG00000037260	ProperStrand	41	chr19	8800355	8800406	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-4.2442
chr18	32047746	32047821	protein_coding	Wdr33	exon	ENSMUSG00000024400	ProperStrand	48	chr7	88938413	88938430	protein_coding	Btbd1	utr3	ENSMUSG00000025103	ProperStrand	10	4	-19.3101
chr4	131865887	131865987	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr2	26766804	26766853	snoRNA	ENSMUSG00000065258_SNORD24	.	ENSMUSG00000065258	ProperStrand	130	2	-1.5180
chr4	88920670	88922610	protein_coding	Cdkn2a	utr3	ENSMUSG00000044303	ProperStrand	13	chr16	23110971	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.3283
chr3	134151041	134151057	lincRNA	Gm16742	intron	ENSMUSG00000084777	NonProperStrand	42	chr9	15118323	15118375	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-4.1332
chr11	115391712	115395878	protein_coding	Sumo2	exon	ENSMUSG00000020738	ProperStrand	24	chr7	116663698	116663759	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-7.0482
chr1	39448058	39448099	protein_coding	Tbc1d8	exon	ENSMUSG00000003134	ProperStrand	8	chr17	56752869	56753065	protein_coding	Rpl36	utr5	ENSMUSG00000057863	ProperStrand	62	3	-19.7986
chr8	113681817	113681896	protein_coding	Glg1	exon	ENSMUSG00000003316	ProperStrand	83	chr10	110918558	110918648	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-2.8642
chr9	78023109	78023148	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr10	119668248	119668348	protein_coding	Llph	exon	ENSMUSG00000020224	ProperStrand	9	1	-9.7293
chr16	84862276	84862305	protein_coding	Gabpa	utr3	ENSMUSG00000008976	ProperStrand	38	chr1	162968460	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	3	-15.8531
chr1	75484537	75484553	protein_coding	Obsl1	exon	ENSMUSG00000026211	NonProperStrand	192	chr19	8798484	8798553	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-3.0306
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr3	68889134	68889226	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	11	-5.4163
chr1	162965990	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	chr13	96100642	96100695	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	3	-0.7595
chr1	75212829	75212873	protein_coding	Tuba4a	exon	ENSMUSG00000026202	ProperStrand	20	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-5.7112
mmu-miR-1949	3	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr5	121582433	121582494	protein_coding	Ptpn11	utr3	ENSMUSG00000043733	ProperStrand	25	1	-9.9143
chr6	148874631	148877056	protein_coding	Fam60a	exon	ENSMUSG00000039985	ProperStrand	68	chr16	23110473	23110563	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.2508
chr12	84023953	84023971	protein_coding	Rgs6	intron	ENSMUSG00000021219	NonProperStrand	65	chr1	162967489	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-3.3279
chr13	110693373	110693391	protein_coding	Pde4d	utr5	ENSMUSG00000021699	NonProperStrand	36	chr5	23825941	23825957	protein_coding	Kcnh2	exon	ENSMUSG00000038319	ProperStrand	242	1	-11.5482
chr14	9003688	9003972	protein_coding	Pdhb	exon	ENSMUSG00000021748	ProperStrand	28	chr7	116664848	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.9326
chr6	128324512	128324529	protein_coding	Foxm1	utr3	ENSMUSG00000001517	NonProperStrand	66	chr13	45015261	45015314	protein_coding	Jarid2	exon	ENSMUSG00000038518	ProperStrand	372	1	-9.4670
chr3	58389169	58389185	protein_coding	2810407C02Rik	exon	ENSMUSG00000075700	ProperStrand	8	chrX	34622991	34623037	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-7.1329
chr4	134028858	134029250	protein_coding	Stmn1	exon	ENSMUSG00000028832	ProperStrand	54	chr4	131908704	131908794	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-4.1172
chr11	50109684	50109750	protein_coding	Canx	utr3	ENSMUSG00000020368	ProperStrand	296	chr16	23110505	23110579	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	4	-2.3581
chr4	21737943	21737961	protein_coding	Usp45	exon	ENSMUSG00000040455	ProperStrand	40	chr7	29136525	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.0737
chr12	60141417	60141509	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	chr2	158185583	158185651	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	4	-4.0879
chr16	84813758	84813848	protein_coding	Jam2	intron	ENSMUSG00000053062	ProperStrand	39	chr9	15119641	15119721	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	18	-18.9353
chr10	23560127	23560144	LINE	Lx8	L1	chr10Lx823560075	ProperStrand	3	chr16	23110828	23110913	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr12	111859837	111859859	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr18	75161537	75161598	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	2	-4.6743
chr7	30231468	30231593	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	chr7	116663634	116663768	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	10	-5.2152
chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	chr2	26768246	26768308	protein_coding	Rpl7a	exon	ENSMUSG00000062647	ProperStrand	234	1	-5.8961
chr4	126523645	126523661	protein_coding	AU040320	exon	ENSMUSG00000028830	NonProperStrand	12	chr13	107697902	107697923	protein_coding	Ipo11	intron	ENSMUSG00000042590	ProperStrand	120	1	-15.2190
chr2	144203357	144203414	protein_coding	Csrp2bp	intron	ENSMUSG00000027425	ProperStrand	32	chr4	40886206	40888581	protein_coding	Bag1	exon	ENSMUSG00000028416	ProperStrand	5	1	-19.1153
chr1	38234386	38234402	protein_coding	Aff3	utr3	ENSMUSG00000037138	NonProperStrand	11	chr9	65127126	65127142	protein_coding	Cilp	exon	ENSMUSG00000042254	ProperStrand	212	1	-14.2452
chr3	53323950	53324955	protein_coding	Frem2	exon	ENSMUSG00000037016	ProperStrand	28	chr12	106269324	106269404	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-5.6168
chr4	76614453	76614470	protein_coding	Ptprd	intron	ENSMUSG00000028399	ProperStrand	198	chr10	110918591	110918643	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-1.4540
chr16	11144073	11144202	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr4	4692402	4692418	protein_coding	Impad1	utr3	ENSMUSG00000066324	ProperStrand	23	1	-12.4014
chr10	80640616	80640850	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr19	29678580	29678596	protein_coding	C030046E11Rik	exon	ENSMUSG00000038658	ProperStrand	104	1	-5.0252
chr17	23810948	23811516	protein_coding	Hcfc1r1	utr5	ENSMUSG00000023904	ProperStrand	5	chrX	7457566	7457585	protein_coding	Pim2	intron	ENSMUSG00000031155	ProperStrand	5	2	-19.0881
chr7	48630097	48630113	protein_coding	AI987944	exon	ENSMUSG00000056383	ProperStrand	1	chr11	6428077	6428156	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-inf
chr16	23110990	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	NonProperStrand	93	chr1	89673626	89673716	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	NonProperStrand	27	1	-14.0469
chr10	90581021	90581111	protein_coding	Slc25a3	intron	ENSMUSG00000061904	ProperStrand	74	chr3	108357270	108357350	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-4.1411
chr2	57090809	57090827	protein_coding	Gpd2	utr5	ENSMUSG00000026827	ProperStrand	93	chr6	25638699	25638715	protein_coding	Gpr37	exon	ENSMUSG00000039904	ProperStrand	49	1	-12.8415
chr4	137734950	137734988	protein_coding	Eif4g3	intron	ENSMUSG00000028760	ProperStrand	42	chrX	71192346	71192553	protein_coding	Hcfc1	exon	ENSMUSG00000031386	ProperStrand	424	1	-10.1155
chr10	86157344	86158408	protein_coding	Hsp90b1	exon	ENSMUSG00000020048	ProperStrand	396	chr18	35714145	35714225	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-1.2732
chr5	106325542	106325559	protein_coding	Zfp326	exon	ENSMUSG00000029290	ProperStrand	29	chr3	96073959	96073997	protein_coding	Hist2h2bb	intron	ENSMUSG00000050936	ProperStrand	57	1	-14.8790
chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr12	110874221	110874292	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	3	-8.1944
chr9	61761189	61761263	protein_coding	Rplp1	exon	ENSMUSG00000007892	ProperStrand	116	chr10	20045577	20045791	protein_coding	Bclaf1	exon	ENSMUSG00000037608	ProperStrand	83	1	-11.3371
chr3	87673824	87673891	protein_coding	Prcc	exon	ENSMUSG00000004895	ProperStrand	38	chr1	172975151	172975189	tRNA	tRNA699-GlyGCC	.	241487	ProperStrand	660	2	-14.9459
chr1	133191792	133252449	protein_coding	Srgap2	intron	ENSMUSG00000026425	ProperStrand	299	chr16	23111402	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	6	-1.2949
chr17	24557150	24557184	protein_coding	Rnps1	exon	ENSMUSG00000034681	ProperStrand	40	chr19	10283671	10283774	protein_coding	Gm98	utr3	ENSMUSG00000036098	ProperStrand	26	1	-15.8293
chr5	147647220	147647476	protein_coding	Rpl21	exon	ENSMUSG00000041453	ProperStrand	112	chr11	74718963	74719010	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	1	-7.7784
chrX	70962862	70962878	protein_coding	Abcd1	exon	ENSMUSG00000031378	ProperStrand	12	chr2	66385173	66385189	protein_coding	Scn9a	exon	ENSMUSG00000075316	ProperStrand	58	1	-16.6443
chr4	154932398	154932498	protein_coding	Gnb1	utr3	ENSMUSG00000029064	ProperStrand	69	chr15	34370596	34370636	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-3.2931
chr7	51505857	51505883	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	chr15	82980098	82980189	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-2.6793
chr15	30242037	30242054	protein_coding	Ctnnd2	intron	ENSMUSG00000022240	NonProperStrand	12	chr1	194571820	194571880	snRNA	ENSMUSG00000064881_U5	.	ENSMUSG00000064881	ProperStrand	187	1	-14.3257
chr10	23506278	23506322	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	chr13	49779667	49779745	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	6	-9.0949
chr16	34549713	34549733	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	chr11	62416615	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-3.6268
chr17	27767566	27767626	protein_coding	Rps10	intron	ENSMUSG00000052146	ProperStrand	94	chr4	131908811	131908845	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-1.4264
chr2	157833119	157833177	protein_coding	Tti1	exon	ENSMUSG00000027650	ProperStrand	17	chr11	69483136	69483182	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-7.9917
chr13	3564242	3564277	protein_coding	Gdi2	exon	ENSMUSG00000021218	ProperStrand	49	chr7	116663637	116663727	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.8648
chr10	60202556	60202575	protein_coding	Slc29a3	intron	ENSMUSG00000020100	ProperStrand	23	chr1	180885279	180885295	protein_coding	Smyd3	utr3	ENSMUSG00000055067	NonProperStrand	190	1	-12.9426
chr19	45867552	45867568	protein_coding	Kcnip2	utr3	ENSMUSG00000025221	NonProperStrand	6	chr19	8963027	8963080	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-6.7266
chr8	47932132	47932149	protein_coding	Irf2	utr3	ENSMUSG00000031627	NonProperStrand	33	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.7641
chr11	83217169	83217217	protein_coding	Ap2b1	utr3	ENSMUSG00000035152	ProperStrand	60	chr5	86541339	86541439	protein_coding	Uba6	utr3	ENSMUSG00000035898	ProperStrand	17	1	-15.8829
chr2	38582517	38582546	protein_coding	Nr6a1	utr3	ENSMUSG00000063972	ProperStrand	52	chr5	108334208	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-5.0970
chr14	80262508	80262525	lincRNA	Gm6999	intron	ENSMUSG00000075495	ProperStrand	265	chr3	138589229	138589361	protein_coding	Rap1gds1	utr3	ENSMUSG00000028149	ProperStrand	16	1	-13.0226
chr13	107669512	107669581	protein_coding	Ipo11	intron	ENSMUSG00000042590	ProperStrand	120	chr1	162967542	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-2.2563
chr1	24619457	24619547	protein_coding	Gm10222	exon	ENSMUSG00000067736	NonProperStrand	11	chr10	23505173	23505253	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.1476
chr2	120415421	120415463	protein_coding	Snap23	intron	ENSMUSG00000027287	ProperStrand	2	chr16	23110880	23110941	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr10	16844327	16844346	LINE	L1_Mur1	L1	chr10L1_Mur116843303	ProperStrand	76	chr1	88247740	88247835	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	2	-7.6971
chr10	60677103	60677122	protein_coding	Adamts14	intron	ENSMUSG00000059901	ProperStrand	17	chr16	23111394	23111484	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.3471
chr4	153410349	153410365	protein_coding	Ccdc27	exon	ENSMUSG00000039492	ProperStrand	94	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	2	-8.1898
chr9	65049531	65049563	snRNA	ENSMUSG00000075930_U5	.	ENSMUSG00000075930	ProperStrand	175	chr19	8800366	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-3.1342
chr6	115757007	115757035	protein_coding	Rpl32	exon	ENSMUSG00000057841	ProperStrand	137	chr13	49779722	49779802	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-5.3896
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr10	77634723	77634745	protein_coding	Pwp2	exon	ENSMUSG00000032834	ProperStrand	7	1	-11.3322
chr13	41279154	41279170	protein_coding	Elovl2	utr3	ENSMUSG00000021364	NonProperStrand	7	chr15	34370545	34370665	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-7.8301
chr11	95435756	95439304	protein_coding	Ngfr	exon	ENSMUSG00000000120	ProperStrand	31	chr9	15118322	15118343	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-4.7160
chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	chr12	88778745	88778766	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-1.4444
chr11	115451723	115451739	protein_coding	Gga3	exon	ENSMUSG00000020740	NonProperStrand	50	chr6	119987900	119988000	protein_coding	Wnk1	utr5	ENSMUSG00000045962	ProperStrand	221	1	-11.0662
chr9	110844906	110845077	protein_coding	Tdgf1	exon	ENSMUSG00000032494	ProperStrand	218	chr2	158182180	158182270	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-2.6184
chr16	24984504	24984520	protein_coding	Lpp	utr3	ENSMUSG00000033306	NonProperStrand	189	chr6	131330343	131330412	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	ProperStrand	408	2	-11.5320
chrX	71518369	71518401	protein_coding	Rpl10	exon	ENSMUSG00000008682	ProperStrand	71	chr4	131908752	131908797	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-1.9914
chr17	28466322	28466412	protein_coding	Rpl10a	exon	ENSMUSG00000037805	ProperStrand	121	chr11	69483200	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-2.5628
chr2	145076805	145209253	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	chr19	8798743	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	2	-0.9642
chr13	76285227	76286195	protein_coding	Ttc37	exon	ENSMUSG00000033991	ProperStrand	28	chr19	8800445	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-8.2473
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	2	-7.2311
chr1	168095949	168096003	protein_coding	Gpa33	utr3	ENSMUSG00000000544	ProperStrand	33	chr14	33005107	33005138	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	2	-8.4831
chr8	124935625	124935657	protein_coding	Zc3h18	intron	ENSMUSG00000017478	ProperStrand	55	chr16	23111706	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.0428
chr11	72553974	72553993	protein_coding	Ankfy1	exon	ENSMUSG00000020790	NonProperStrand	8	chr4	131865912	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-17.7195
chr2	144087333	144087413	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	chr16	43886794	43886884	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	1	-1.7409
chr11	55296280	55296332	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	chr19	8799021	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	4	-1.8405
chr17	56349489	56349579	protein_coding	Dpp9	intron	ENSMUSG00000001229	ProperStrand	17	chr14	33005156	33005236	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-6.4617
chr13	95924119	95924137	protein_coding	Pde8b	intron	ENSMUSG00000021684	NonProperStrand	13	chr5	130077040	130077080	protein_coding	Sfswap	utr3	ENSMUSG00000029439	ProperStrand	34	1	-17.3582
chr11	83107805	83107903	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	chr3	123210854	123210923	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	8	-2.0469
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr11	48613992	48615176	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	1	-1.8139
chr8	95355006	95355022	protein_coding	Mmp2	intron	ENSMUSG00000031740	ProperStrand	42	chr17	27110943	27110979	protein_coding	Ggnbp1	utr5	ENSMUSG00000048731	ProperStrand	5	1	-18.4417
chr19	5283914	5284578	protein_coding	Sf3b2	exon	ENSMUSG00000024853	ProperStrand	102	chr15	79913288	79913321	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-4.6219
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	120148960	120148976	protein_coding	Bahcc1	exon	ENSMUSG00000039741	NonProperStrand	268	6	-11.5146
chrX	72214248	72214264	protein_coding-noncoding	Gab3	utr3	ENSMUSG00000032750	ProperStrand	420	chr2	26768049	26768106	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	1	-4.5730
chr9	63868722	63868739	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	chr4	116826698	116826727	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-2.3466
chr10	84159729	84159746	protein_coding	Polr3b	exon	ENSMUSG00000034453	ProperStrand	41	chr2	26494708	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	5	-15.9706
chr19	4322523	4322634	protein_coding	Kdm2a	utr3	ENSMUSG00000054611	ProperStrand	71	chr19	8798509	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	8	-inf
chr2	129004104	129004121	antisense	AI847159	.	ENSMUSG00000084826	NonProperStrand	63	chr3	113324833	113325317	protein_coding	Rnpc3	exon	ENSMUSG00000027981	ProperStrand	9	1	-17.1065
chr17	56157130	56157290	protein_coding	Sh3gl1	exon	ENSMUSG00000003200	ProperStrand	6	chr7	116664803	116664893	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-7.0474
chr8	113447073	113447163	snoRNA	ENSMUSG00000065100_SNORA57	.	ENSMUSG00000065100	ProperStrand	81	chr17	24857717	24857797	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.8110
chr13	36071425	36071476	protein_coding	Lyrm4	utr3	ENSMUSG00000046573	ProperStrand	8	chr7	118219574	118219650	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-8.2090
chr7	54443684	54443735	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	chr11	69483172	69483262	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	4	-1.7609
chr19	3357184	3357274	protein_coding	Cpt1a	intron	ENSMUSG00000024900	ProperStrand	48	chr17	24857732	24857812	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.6786
chr11	78284914	78284931	protein_coding	Slc46a1	utr3	ENSMUSG00000020829	NonProperStrand	1	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr8	74008400	74008417	protein_coding	Ano8	exon	ENSMUSG00000034863	NonProperStrand	171	chr10	79281863	79281980	protein_coding	Palm	exon	ENSMUSG00000035863	ProperStrand	58	2	-17.6322
chr6	17573297	17573387	LTR	ORR1A2	MaLR	chr6ORR1A217573186	ProperStrand	1	chr2	11181358	11181438	protein_coding	Prkcq	intron	ENSMUSG00000026778	NonProperStrand	6	1	-inf
chr1	187112022	187113295	protein_coding	Iars2	exon	ENSMUSG00000026618	ProperStrand	68	chr7	29136620	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.1563
chr11	96112970	96112987	protein_coding	Gm53	exon	ENSMUSG00000078706	NonProperStrand	16	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.8202
chr2	120872244	120872260	protein_coding	Tgm5	exon	ENSMUSG00000053675	NonProperStrand	163	chr17	24342578	24342596	protein_coding	Ntn3	utr3	ENSMUSG00000079662	ProperStrand	237	1	-8.5577
chr8	32271244	32272241	protein_coding	Mak16	exon	ENSMUSG00000031578	ProperStrand	26	chr9	120038635	120038672	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.6046
chr13	54692337	54692435	protein_coding	Higd2a	utr3	ENSMUSG00000025868	ProperStrand	5	chr7	29136526	29136553	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-7.2327
chr3	88787051	88787067	protein_coding	Ash1l	exon	ENSMUSG00000028053	NonProperStrand	50	chr1	153759643	153759664	protein_coding	1700025G04Rik	intron	ENSMUSG00000032666	NonProperStrand	35	1	-14.7790
chr2	120872244	120872260	protein_coding	Tgm5	exon	ENSMUSG00000053675	NonProperStrand	163	chr15	79913322	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-1.8653
chr12	101372695	101375868	protein_coding	BC002230	exon	ENSMUSG00000021179	ProperStrand	37	chr1	168239525	168239541	protein_coding	Ildr2	exon	ENSMUSG00000040612	ProperStrand	103	1	-13.2062
chr17	34790501	34790704	protein_coding	Atf6b	exon	ENSMUSG00000015461	ProperStrand	11	chr10	23505165	23505255	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	7	-20.9383
chr4	125371277	125371357	protein_coding	Grik3	exon	ENSMUSG00000001985	ProperStrand	126	chr18	38610988	38611078	protein_coding	Ndfip1	intron	ENSMUSG00000024425	ProperStrand	42	8	-19.4600
chr4	43505656	43505792	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr17	46727278	46727301	protein_coding	Ptk7	exon	ENSMUSG00000023972	ProperStrand	101	2	-3.8873
chr17	28466416	28466467	protein_coding	Rpl10a	exon	ENSMUSG00000037805	ProperStrand	121	chr16	38158104	38158171	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	1	-7.2516
chr9	70626645	70626661	protein_coding	Adam10	utr3	ENSMUSG00000054693	ProperStrand	12	chr6	94776848	94776873	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	1	-12.3819
chr10	117146530	117146556	protein_coding	Mdm2	intron	ENSMUSG00000020184	ProperStrand	17	chr16	23111771	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.1536
chr11	61283362	61283379	LTR	RLTR20B3	ERVK	chr11RLTR20B361283341	ProperStrand	10	chr17	57162369	57162495	protein_coding	Khsrp	exon	ENSMUSG00000007670	ProperStrand	353	1	-13.4326
chr7	51505890	51505910	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	chr11	69481335	69481433	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	3	-0.8496
chr2	179322378	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr18	37911790	37911806	protein_coding	Pcdhga9	intron	ENSMUSG00000023036	ProperStrand	245	1	-8.3962
chr7	139951838	139963266	protein_coding	Fam53b	exon	ENSMUSG00000030956	ProperStrand	8	chr8	73419657	73419777	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-7.0879
chr7	20264173	20264263	protein_coding	Apoc2	intron	ENSMUSG00000002992	NonProperStrand	4	chr7	20263984	20264064	protein_coding	Apoc4	exon	ENSMUSG00000074336	NonProperStrand	1	1	-inf
chr12	55797765	55797874	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	chr2	26493388	26493482	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	5	-1.5877
chrX	84483704	84483741	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr15	79908931	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	6	-8.3163
chr5	151585618	151590890	protein_coding	Pds5b	exon	ENSMUSG00000034021	ProperStrand	21	chr16	23110902	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.9373
chr16	35658696	35659824	protein_coding	Sema5b	exon	ENSMUSG00000052133	ProperStrand	9	chr16	23110511	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-6.0870
chr5	115722644	115722744	protein_coding	Rnf10	utr5	ENSMUSG00000041740	ProperStrand	95	chr13	35832649	35832667	protein_coding	Cdyl	intron	ENSMUSG00000059288	ProperStrand	18	1	-14.8213
chr10	20395589	20395606	protein_coding	Pde7b	intron	ENSMUSG00000019990	NonProperStrand	17	chr7	117189865	117189943	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	2	-13.9550
chr11	100750051	100750794	protein_coding	Stat3	utr3	ENSMUSG00000004040	ProperStrand	20	chr7	31409588	31411095	protein_coding	Cox6b1	utr5	ENSMUSG00000036751	ProperStrand	23	2	-18.7086
chr10	61120940	61120958	protein_coding	Ppa1	intron	ENSMUSG00000020089	NonProperStrand	5	chr15	34370545	34370651	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	5	-inf
chr3	24426816	24426832	LINE	Lx9	L1	chr3Lx924426687	NonProperStrand	2	chr3	123210876	123210972	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-9.1566
chr18	82662186	82662202	protein_coding	Mbp	intron	ENSMUSG00000041607	NonProperStrand	185	chr6	125112703	125112892	protein_coding	Gapdh	exon	ENSMUSG00000057666	ProperStrand	356	1	-7.4978
chr19	41297585	41297618	protein_coding	Tm9sf3	utr3	ENSMUSG00000025016	ProperStrand	21	chr14	31867350	31867368	protein_coding	Pbrm1	exon	ENSMUSG00000042323	ProperStrand	87	1	-14.6923
chr2	153594136	153594236	protein_coding	Mapre1	utr3	ENSMUSG00000027479	ProperStrand	19	chrX	143918924	143918963	snoRNA	ENSMUSG00000084421_SNORA35	.	ENSMUSG00000084421	ProperStrand	293	1	-12.4676
chr6	47738068	47738104	misc_RNA	Y_RNA	.	ENSMUSG00000065701	ProperStrand	129	chr1	162965575	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.9614
chr2	179322380	179322401	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr11	69405046	69405132	protein_coding	Trp53	utr3	ENSMUSG00000059552	ProperStrand	47	2	-18.4138
chr6	29150581	29150689	protein_coding	Impdh1	utr3	ENSMUSG00000003500	ProperStrand	20	chr5	136333035	136333053	protein_coding	Srrm3	utr3	ENSMUSG00000039860	ProperStrand	41	4	-inf
chr15	79070025	79070069	protein_coding	Pick1	exon	ENSMUSG00000068206	ProperStrand	21	chr16	23110959	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.9373
chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	chr19	8963024	8963127	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	8	-2.4469
chr10	82456766	82456785	protein_coding	Chst11	intron	ENSMUSG00000034612	ProperStrand	170	chr8	73419657	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	4	-5.9156
chr11	101645784	101645807	protein_coding-noncoding	Etv4	utr3	ENSMUSG00000017724	NonProperStrand	9	chr18	62149501	62149518	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	1	-13.0720
chr15	5068442	5068480	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	chr3	88497863	88497980	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-0.9704
chr8	88506907	88506933	protein_coding	Phkb	intron	ENSMUSG00000036879	ProperStrand	25	chr4	131908689	131908797	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.6029
chr2	92070840	92201671	protein_coding	Phf21a	exon	ENSMUSG00000058318	ProperStrand	25	chr16	23110533	23110584	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-9.9563
chr6	124661932	124662009	protein_coding	Emg1	exon	ENSMUSG00000004268	ProperStrand	12	chr7	117166823	117166852	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	2	-12.9338
chr19	41634955	41635055	protein_coding	Lcor	utr3	ENSMUSG00000025019	ProperStrand	17	chr13	90238664	90238722	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	2	-17.6159
chr14	63287574	63287614	protein_coding	Serpine3	intron	ENSMUSG00000091155	ProperStrand	210	chr19	8963027	8963082	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-1.2168
chr15	99609316	99609350	protein_coding	Lima1	utr3	ENSMUSG00000023022	ProperStrand	159	chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	1	-6.8884
chr15	99329179	99329195	protein_coding	Faim2	utr3	ENSMUSG00000023011	ProperStrand	45	chr18	32413742	32413759	protein_coding	Ercc3	exon	ENSMUSG00000024382	ProperStrand	280	1	-10.8054
chr8	90688845	90690909	protein_coding	Heatr3	exon	ENSMUSG00000031657	ProperStrand	24	chr4	131865907	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.3401
chr2	113927117	113960485	protein_coding	Aqr	exon	ENSMUSG00000040383	ProperStrand	70	chr16	23110917	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-1.8309
chr3	101398151	101398937	protein_coding	Atp1a1	exon	ENSMUSG00000033161	ProperStrand	316	chr4	131865443	131865513	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	3	-3.7143
chr13	9833580	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr8	124407540	124407640	protein_coding	Slc7a5	exon	ENSMUSG00000040010	ProperStrand	166	1	-3.0524
chr16	44160440	44160479	protein_coding	Naa50	utr3	ENSMUSG00000022698	ProperStrand	56	chr9	15118336	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.5938
chr11	50109730	50109773	protein_coding	Canx	utr3	ENSMUSG00000020368	ProperStrand	296	chr10	23505559	23505624	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-4.4305
chr6	49195524	49195608	protein_coding	Tra2a	exon	ENSMUSG00000029817	ProperStrand	54	chr5	108931694	108931712	protein_coding	Pcgf3	utr3	ENSMUSG00000033623	ProperStrand	17	1	-16.0883
chr4	101138045	101138127	protein_coding	Ak4	utr3	ENSMUSG00000028527	ProperStrand	20	chr14	33005146	33005236	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-6.1342
chr15	102300983	102301064	lincRNA	Gm17403	intron	ENSMUSG00000090630	NonProperStrand	10	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-11.8174
chr9	21079732	21079822	protein_coding	Kri1	exon	ENSMUSG00000035047	NonProperStrand	1	chr16	23111388	23111468	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-inf
chr2	92070859	92160453	protein_coding	Phf21a	exon	ENSMUSG00000058318	ProperStrand	25	chr5	121655018	121655098	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-8.9375
chrX	34456268	34456302	protein_coding	Sept6	utr3	ENSMUSG00000050379	ProperStrand	29	chr6	38577350	38577366	protein_coding	Klrg2	utr3	ENSMUSG00000071537	NonProperStrand	37	1	-15.7748
chr16	4084533	4084623	protein_coding	Crebbp	exon	ENSMUSG00000022521	ProperStrand	56	chr16	23111694	23111774	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.0136
chr12	82881655	82881705	protein_coding	Map3k9	exon	ENSMUSG00000042724	NonProperStrand	8	chr16	23111389	23111489	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	NonProperStrand	38	1	-18.0100
chr3	89354340	89354357	protein_coding	Kcnn3	intron	ENSMUSG00000000794	NonProperStrand	38	chr2	130102034	130102080	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	2	-10.1599
chr5	122919707	122919729	protein_coding	Atp2a2	exon	ENSMUSG00000029467	ProperStrand	166	chr9	34978825	34983360	protein_coding	Dcps	exon	ENSMUSG00000032040	ProperStrand	38	1	-12.1932
chr10	23505780	23506629	protein_coding	Rps12	exon	ENSMUSG00000061983	ProperStrand	309	chr10	110918573	110918653	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-0.8695
chr4	131908357	131908464	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr11	75578595	75578619	protein_coding	Ywhae	utr3	ENSMUSG00000020849	ProperStrand	176	2	-8.4514
chr11	93811323	93811355	protein_coding	Gm20390	exon	ENSMUSG00000091228	ProperStrand	33	chr10	23505203	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.1417
chr12	83541816	83541916	protein_coding	Sipa1l1	exon	ENSMUSG00000042700	ProperStrand	84	chr6	71832550	71832576	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-4.9567
chr5	138623137	138623189	protein_coding	Taf6	exon	ENSMUSG00000036980	ProperStrand	11	chr7	117189923	117190013	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-6.6445
mmu-miR-1291	0	26	miRNA	mmu-miR-1291	.	mmu-miR-1291	ProperStrand	103	chr1	162968442	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-5.0243
chr18	82764043	82764059	protein_coding	Zfp236	utr3	ENSMUSG00000041258	ProperStrand	15	chr7	117189863	117189920	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-9.0015
chr7	134400469	134400549	protein_coding	Dctpp1	utr3	ENSMUSG00000042462	ProperStrand	14	chr9	15119675	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.3767
chr2	116736541	116736557	lincRNA	D330050G23Rik	exon	ENSMUSG00000085316	NonProperStrand	7	chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	1	-16.0904
chr11	34934861	34934880	protein_coding	Slit3	utr5	ENSMUSG00000056427	NonProperStrand	45	chr7	148634735	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-7.5466
chr6	131326184	131330959	protein_coding	Csda	exon	ENSMUSG00000030189	ProperStrand	86	chr16	23111701	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	8	-14.2207
chr4	43505797	43505897	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr13	38437929	38437946	protein_coding	Bmp6	utr5	ENSMUSG00000039004	ProperStrand	21	1	-5.0559
chr19	47097872	47097937	protein_coding	Ina	exon	ENSMUSG00000034336	ProperStrand	27	chrX	71517835	71517925	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-8.1433
chr2	90235289	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr16	23111689	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	62	-1.0662
chr7	51788774	51798762	protein_coding	Pold1	exon	ENSMUSG00000038644	ProperStrand	50	chr16	23110911	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	9	-10.3849
chr9	122978120	122978189	protein_coding-noncoding	Zdhhc3	utr3	ENSMUSG00000025786	ProperStrand	9	chr18	35716853	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-5.7446
chr5	136607995	136609211	protein_coding	Lrwd1	exon	ENSMUSG00000029703	ProperStrand	27	chr4	131908688	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-4.3923
chr11	23346466	23346648	protein_coding	Usp34	exon	ENSMUSG00000056342	ProperStrand	68	chr1	63225682	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	12	-20.1547
chr17	25227922	25229234	protein_coding	Ift140	exon	ENSMUSG00000024169	ProperStrand	25	chr11	97642952	97643056	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	9	-inf
chr11	43248430	43248520	protein_coding	Slu7	intron	ENSMUSG00000020409	ProperStrand	7	chr11	69481335	69481415	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-7.4495
chr12	37542834	37542867	miRNA	Mir5099	.	ENSMUSG00000092998	ProperStrand	13	chr4	43505656	43505721	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	1	-6.0161
chr9	83678799	83681879	protein_coding	Elovl4	exon	ENSMUSG00000032262	ProperStrand	159	chr15	79913288	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	3	-5.2803
chr6	28479000	28481431	protein_coding	Snd1	exon	ENSMUSG00000001424	ProperStrand	210	chrX	152009278	152009294	protein_coding	Ptchd1	exon	ENSMUSG00000041552	NonProperStrand	294	1	-7.6256
chr2	35570862	35570914	protein_coding	Dab2ip	exon	ENSMUSG00000026883	ProperStrand	93	chr7	29136597	29136638	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-3.0727
chr16	58424875	58433460	protein_coding	Dcbld2	exon	ENSMUSG00000035107	ProperStrand	56	chr19	8798740	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	2	-8.1495
chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	chr7	52382011	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-3.7867
chr11	9033282	9033314	protein_coding	Upp1	exon	ENSMUSG00000020407	ProperStrand	73	chr7	28244631	28247596	protein_coding	Blvrb	exon	ENSMUSG00000040466	ProperStrand	11	4	-19.2270
chrX	156315499	156315519	protein_coding	Sh3kbp1	intron	ENSMUSG00000040990	ProperStrand	67	chr5	130300493	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.3223
chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	chr1	92698923	92698940	protein_coding	Col6a3	exon	ENSMUSG00000048126	NonProperStrand	44	1	-13.1936
chr10	107800736	107800854	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	chr18	33954816	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	6	-2.5008
chr5	149163806	149163857	protein_coding	Slc7a1	exon	ENSMUSG00000041313	ProperStrand	65	chr10	23505152	23505201	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.1260
chr16	4153706	4153728	protein_coding	Crebbp	intron	ENSMUSG00000022521	NonProperStrand	5	chr5	145891035	145891095	protein_coding	Pdap1	utr3	ENSMUSG00000029623	ProperStrand	112	2	-inf
chr2	26493405	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr11	71856746	71856763	protein_coding	Fam64a	exon	ENSMUSG00000020808	NonProperStrand	19	1	-8.5018
chr13	104861891	104861961	protein_coding	Nln	intron	ENSMUSG00000021710	ProperStrand	47	chr11	97642966	97643056	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-7.4739
chr15	79501628	79502365	protein_coding	Tomm22	exon	ENSMUSG00000022427	ProperStrand	7	chr5	130300470	130300496	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-6.6707
chr1	132742958	132742975	protein_coding	Pigr	exon	ENSMUSG00000026417	NonProperStrand	48	chr2	26494762	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.5138
chr7	35070624	35070671	protein_coding	4931406P16Rik	utr5	ENSMUSG00000066571	ProperStrand	75	chr2	130103752	130103825	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	4	-19.6682
chr8	87369935	87370219	protein_coding	Calr	exon	ENSMUSG00000003814	ProperStrand	232	chr11	100985253	100985331	protein_coding	Tubg1	exon	ENSMUSG00000035198	ProperStrand	8	2	-19.0556
chr19	21853064	21853081	protein_coding	Tmem2	utr5	ENSMUSG00000024754	ProperStrand	133	chr1	162967490	162967546	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-2.0874
chr10	95010371	95010390	protein_coding	Nudt4	utr3	ENSMUSG00000020029	ProperStrand	32	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	6	-18.0574
chr18	66810049	66810139	LTR	MTD	MaLR	chr18MTD66809950	ProperStrand	1	chr5	100510407	100510487	antisense	5830403M04Rik	.	ENSMUSG00000086259	ProperStrand	1	1	-inf
chr7	136800631	136800649	SINE	RSINE1	B4	chr7RSINE1136800606	ProperStrand	216	chr4	35166076	35166093	protein_coding	3110043O21Rik	exon	ENSMUSG00000028300	NonProperStrand	1	1	-inf
chr4	45412738	45412838	protein_coding	Mcart1	exon	ENSMUSG00000045973	ProperStrand	5	chr1	162967547	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-8.4848
chr7	137885575	137885645	protein_coding	Tacc2	intron	ENSMUSG00000030852	ProperStrand	95	chr7	118219575	118219616	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-5.6704
chr4	117556964	117557054	protein_coding	Atp6v0b	utr3	ENSMUSG00000033379	ProperStrand	13	chr1	72895810	72896141	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	1	-12.5988
chr1	77460831	77460909	protein_coding	Epha4	intron	ENSMUSG00000026235	ProperStrand	57	chr1	9932550	9932621	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-7.8319
chr8	83309034	83312417	protein_coding	Gab1	exon	ENSMUSG00000031714	ProperStrand	72	chr17	39985366	39985456	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-5.5746
chr13	107689047	107690844	protein_coding	Ipo11	exon	ENSMUSG00000042590	ProperStrand	120	chr6	71832605	71832685	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	35	-23.0470
chr2	5412955	5412972	protein_coding	Camk1d	intron	ENSMUSG00000039145	ProperStrand	50	chr17	35087895	35087939	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-5.5561
chr19	9047581	9052082	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	chr9	120038466	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	8	-7.1553
chr9	57396400	57396465	protein_coding	Mpi	exon	ENSMUSG00000032306	ProperStrand	8	chr16	23110959	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.2180
chr4	41160816	41160838	protein_coding	Ubap2	exon	ENSMUSG00000028433	ProperStrand	292	chr17	39985196	39985291	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	4	-10.1458
chr10	90628745	90633813	protein_coding	Tmpo	exon	ENSMUSG00000019961	ProperStrand	57	chr16	23111453	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.3302
chr17	23955822	23955839	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	chr11	69483136	69483191	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.0613
chr6	70794802	70794819	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chr5	121655016	121655150	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-3.7532
chr11	99885311	99885327	protein_coding	Krt33b	exon	ENSMUSG00000057723	NonProperStrand	352	chr5	92485098	92485183	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	3	-12.2431
chr15	74789693	74789726	protein_coding	Ly6e	utr3	ENSMUSG00000022587	ProperStrand	21	chrX	100998202	100998218	protein_coding	Slc16a2	intron	ENSMUSG00000033965	NonProperStrand	5	1	-19.3637
chr13	28843546	28843562	lincRNA	2610307P16Rik	intron	ENSMUSG00000085936	ProperStrand	154	chr2	144087385	144087462	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-4.7070
chr4	136106575	136106665	protein_coding	Kdm1a	utr3	ENSMUSG00000036940	ProperStrand	83	chr19	8800355	8800434	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-2.9425
chr10	33650004	33650020	protein_coding	Zufsp	utr3	ENSMUSG00000039531	ProperStrand	9	chr10	110918549	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-7.1883
chr7	75097749	75097765	protein_coding	Igf1r	exon	ENSMUSG00000005533	ProperStrand	121	chr6	115758072	115758117	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-4.1244
chr6	142439080	142439096	protein_coding	Ldhb	exon	ENSMUSG00000030246	NonProperStrand	63	chr16	23111755	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-3.3449
chr10	56108276	56108338	protein_coding	Gja1	exon	ENSMUSG00000050953	ProperStrand	70	chr6	115757991	115758043	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-5.1717
chr7	13516163	13516200	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr14	76247731	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-1.1997
chr16	22248553	22249123	protein_coding	Tra2b	exon	ENSMUSG00000022858	ProperStrand	32	chr3	123210867	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	4	-10.9101
chr15	37921902	38008385	protein_coding	Ubr5	exon	ENSMUSG00000037487	ProperStrand	258	chr9	15119631	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	6	-5.7327
chr6	91641789	91641806	protein_coding	Slc6a6	intron	ENSMUSG00000030096	ProperStrand	206	chr1	162965551	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.2648
chr11	97489600	97489617	protein_coding	E130012A19Rik	exon	ENSMUSG00000043439	NonProperStrand	110	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-4.0514
chr8	77634111	77634228	protein_coding	Mcm5	exon	ENSMUSG00000005410	ProperStrand	199	chr11	97642952	97643014	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-0.7415
chr13	55391546	55391563	protein_coding	Nsd1	exon	ENSMUSG00000021488	ProperStrand	186	chr10	79281863	79281980	protein_coding	Palm	exon	ENSMUSG00000035863	ProperStrand	58	1	-11.1121
chr3	112730315	112730395	SINE	B4	B4	chr3B4112730233	ProperStrand	1	chr3	112730436	112730526	SINE	B4A	B4	chr3B4A112730420	ProperStrand	1	1	-inf
chr19	36953799	36953899	protein_coding	Tnks2	exon	ENSMUSG00000024811	ProperStrand	133	chr9	120037947	120037979	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-3.2176
chr7	52304814	52304844	protein_coding	Prr12	exon	ENSMUSG00000046574	ProperStrand	86	chr14	34145913	34145956	protein_coding	Arhgap22	intron	ENSMUSG00000063506	ProperStrand	11	2	-20.0042
chr8	89279838	89279928	SINE	ID4_	ID	chr8ID4_89279841	NonProperStrand	1	chr17	24857717	24857797	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-inf
chr8	127557641	127557741	protein_coding	Tsnax	utr3	ENSMUSG00000056820	ProperStrand	5	chr9	15119733	15119768	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-7.5411
chr18	36961529	36961619	misc_RNA	Vault	.	ENSMUSG00000065145	ProperStrand	177	chr7	52380983	52381030	protein_coding	Rpl13a	utr3	ENSMUSG00000074129	ProperStrand	269	1	-8.1417
chr7	34918238	34918254	protein_coding	Wtip	utr5	ENSMUSG00000036459	NonProperStrand	9	chr2	26494708	26494797	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-6.8145
chr10	53696872	53696889	protein_coding	Man1a	exon	ENSMUSG00000003746	NonProperStrand	8	chrX	34622905	34623022	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	3	-16.6399
chr8	87553206	87553306	protein_coding	2310036O22Rik	intron	ENSMUSG00000041203	ProperStrand	4	chr11	6428035	6428088	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-8.6824
chr4	14813744	14813802	protein_coding	Tmem55a	exon	ENSMUSG00000028221	ProperStrand	28	chr7	116664793	116664924	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	8	-19.7940
chr12	113337239	113337259	LINE	L1MB2	L1	chr12L1MB2113337179	NonProperStrand	1	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-inf
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr12	110918156	110918221	snoRNA	ENSMUSG00000065749_AF357428	.	ENSMUSG00000065749	ProperStrand	218	1	-3.8810
chr13	9833560	9833661	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr10	80641717	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	3	-1.6762
chr19	9026317	9026343	protein_coding	Mta2	utr3	ENSMUSG00000071646	ProperStrand	70	chr19	8800093	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-7.3009
chr11	52189938	52189993	protein_coding	Vdac1	exon	ENSMUSG00000020402	ProperStrand	107	chr10	127845600	127845756	protein_coding	Obfc2b	exon	ENSMUSG00000025374	ProperStrand	2	1	-inf
chr7	133941158	133941225	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	chr3	152450609	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	4	-12.7631
chr15	101919784	101919845	protein_coding	Eif4b	intron	ENSMUSG00000058655	ProperStrand	484	chr11	48616641	48616709	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	1	-5.2187
chr11	4956158	4956174	protein_coding	Gas2l1	utr3	ENSMUSG00000034201	ProperStrand	33	chr3	123210878	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.0977
chr14	63757221	63757311	protein_coding	Ctsb	exon	ENSMUSG00000021939	ProperStrand	48	chr13	21872405	21872485	protein_coding	Hist1h1b	utr5	ENSMUSG00000058773	ProperStrand	65	1	-13.6005
chr4	128893923	128893975	protein_coding	Yars	exon	ENSMUSG00000028811	ProperStrand	131	chr19	8799831	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	3	-8.6260
chr8	108766559	108766668	protein_coding-noncoding	Prmt7	utr5	ENSMUSG00000060098	ProperStrand	6	chr17	27730946	27730981	protein_coding	Nudt3	intron	ENSMUSG00000024213	ProperStrand	26	6	-inf
chr13	23448373	23448445	protein_coding	Zfp322a	exon	ENSMUSG00000046351	ProperStrand	4	chr4	131908710	131908800	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-6.2660
chr1	194571787	194571853	snRNA	ENSMUSG00000064881_U5	.	ENSMUSG00000064881	ProperStrand	187	chr19	17900101	17900117	snoRNA	ENSMUSG00000089540_snoU13	.	ENSMUSG00000089540	ProperStrand	99	1	-10.0272
chr19	31737966	31737983	protein_coding	Prkg1	intron	ENSMUSG00000052920	ProperStrand	32	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.8186
chrX	68673656	68673756	protein_coding	Cd99l2	utr3	ENSMUSG00000035776	ProperStrand	16	chr14	76247712	76247754	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-10.9982
chr11	106127284	106127927	protein_coding	Smarcd2	exon	ENSMUSG00000078619	ProperStrand	17	chr4	131908358	131908438	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.5556
chr10	12902322	12902670	protein_coding	Ltv1	exon	ENSMUSG00000019814	ProperStrand	76	chr19	8799582	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-6.2990
chr4	43505771	43505861	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr7	88529498	88529520	protein_coding	Cpeb1	intron	ENSMUSG00000025586	NonProperStrand	29	1	-4.4269
chr11	4802399	4802418	protein_coding	Thoc5	exon	ENSMUSG00000034274	ProperStrand	325	chr14	35504886	35504976	protein_coding	Wapal	exon	ENSMUSG00000041408	ProperStrand	93	1	-9.0491
chr1	29025575	29025592	LTR	RLTR18	ERVK	chr1RLTR1829025400	ProperStrand	6	chr2	83564891	83564943	protein_coding	Itgav	exon	ENSMUSG00000027087	ProperStrand	59	1	-17.7551
chr9	78023109	78023150	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr4	32805391	32806174	protein_coding	Mdn1	exon	ENSMUSG00000058006	ProperStrand	184	4	-12.2295
chr15	11317049	11317073	protein_coding	Tars	exon	ENSMUSG00000022241	ProperStrand	121	chr11	69483136	69483195	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.3499
chr14	51460950	51460966	protein_coding	Tep1	exon	ENSMUSG00000006281	ProperStrand	37	chr11	62416602	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-6.1154
chrX	71589885	71589908	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr19	8799584	8799646	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	2	-6.2794
chr17	46884450	46884466	protein_coding	Cnpy3	exon	ENSMUSG00000023973	ProperStrand	85	chr9	120037898	120037925	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-4.0431
chr10	107294045	107294061	protein_coding	Otogl	exon	ENSMUSG00000091455	NonProperStrand	8	chr7	116663633	116663749	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-6.3908
chr15	63376628	63376647	LINE	L2a	L2	chr15L2a63376632	NonProperStrand	1	chr4	116663037	116663894	protein_coding	Urod	exon	ENSMUSG00000028684	ProperStrand	14	1	-inf
chr19	57082323	57082340	protein_coding	Afap1l2	intron	ENSMUSG00000025083	ProperStrand	8	chr6	112689098	112689322	protein_coding	Srgap3	exon	ENSMUSG00000030257	NonProperStrand	208	1	-14.9424
chr6	47738069	47738105	misc_RNA	Y_RNA	.	ENSMUSG00000065701	ProperStrand	129	chr4	131865393	131865493	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-2.6160
chr11	60526176	60526194	protein_coding	Llgl1	exon	ENSMUSG00000020536	ProperStrand	20	chr17	25520052	25520069	protein_coding	Cacna1h	exon	ENSMUSG00000024112	ProperStrand	30	1	-16.9998
chr1	138122170	138122187	protein_coding	5730559C18Rik	intron	ENSMUSG00000041605	NonProperStrand	22	chr11	62416602	62416627	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-7.1558
chr19	37296058	37296158	protein_coding	March5	utr3	ENSMUSG00000023307	ProperStrand	17	chr1	63225604	63225654	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-9.2096
chr9	65049529	65049622	snRNA	ENSMUSG00000075930_U5	.	ENSMUSG00000075930	ProperStrand	175	chr9	120038552	120038672	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	10	-18.2039
chr7	20344355	20344378	protein_coding	Bcam	exon	ENSMUSG00000002980	ProperStrand	43	chr4	57727889	57727906	protein_coding	Gm20459	intron	ENSMUSG00000089945	NonProperStrand	34	1	-15.1377
chr9	4299367	4302483	protein_coding	Aasdhppt	exon	ENSMUSG00000025894	ProperStrand	121	chr2	144087414	144087461	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-5.1711
chr4	117814999	117817066	protein_coding	Kdm4a	exon	ENSMUSG00000033326	ProperStrand	81	chr16	23111394	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-2.9079
chr19	7280734	7280751	protein_coding	Otub1	utr5	ENSMUSG00000024767	ProperStrand	9	chr7	13516163	13516213	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	1	-12.5500
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr18	12172461	12172477	protein_coding	6030446N20Rik	intron	ENSMUSG00000049411	ProperStrand	235	1	-5.8878
chr11	97891133	97891187	protein_coding	Rpl19	exon	ENSMUSG00000017404	ProperStrand	120	chr9	103401280	103401296	protein_coding	Tmem108	exon	ENSMUSG00000042757	NonProperStrand	323	1	-8.5522
chr14	31384368	31384418	protein_coding	Tkt	exon	ENSMUSG00000021957	ProperStrand	160	chr7	130411131	130411148	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	1	-10.5983
chr10	86161077	86161130	protein_coding	Hsp90b1	exon	ENSMUSG00000020048	ProperStrand	396	chr9	15118322	15118378	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	3	-2.1999
chr11	75578746	75578836	protein_coding	Ywhae	utr3	ENSMUSG00000020849	ProperStrand	176	chr8	98270029	98270096	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	2	-5.9372
chr2	71096256	71098941	protein_coding	Dync1i2	exon	ENSMUSG00000027012	ProperStrand	35	chr10	39978396	39978486	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-6.5232
chr19	58514680	58514700	protein_coding	Gfra1	intron	ENSMUSG00000025089	ProperStrand	5	chr19	8963088	8963181	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-7.1260
chr7	133690814	133695625	protein_coding	Eif3c	exon	ENSMUSG00000030738	ProperStrand	92	chr7	117189948	117190054	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-4.5191
chr17	39985211	39985300	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr9	15120949	15121029	snoRNA	ENSMUSG00000065265_SNORA32	.	ENSMUSG00000065265	ProperStrand	101	1	-4.9177
chr17	29109591	29109607	protein_coding	Stk38	exon	ENSMUSG00000024006	ProperStrand	57	chr4	131908773	131908873	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.2943
chr16	57130458	57130479	protein_coding	Tomm70a	intron	ENSMUSG00000022752	ProperStrand	82	chr10	23505151	23505203	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-0.8385
chr6	71832632	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	chr13	49779702	49779720	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	2	-1.0609
chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	chr5	77709973	77710092	protein_coding	Rest	exon	ENSMUSG00000029249	ProperStrand	136	1	-8.8366
chr5	135140066	135140121	protein_coding	Limk1	exon	ENSMUSG00000029674	ProperStrand	10	chr11	77994800	77994835	snoRNA	ENSMUSG00000064540_Snord42a	.	ENSMUSG00000064540	ProperStrand	142	1	-15.2601
chr11	57874939	57874957	protein_coding	Larp1	utr3	ENSMUSG00000037331	ProperStrand	201	chr15	5068429	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	5	-15.5331
chr8	106875502	106875592	protein_coding	Gm9853	utr3	ENSMUSG00000051554	ProperStrand	25	chr14	76247726	76247806	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-5.8745
chr13	35922426	35922451	protein_coding	Cdyl	intron	ENSMUSG00000059288	ProperStrand	18	chr7	118219574	118219641	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-10.6242
chr7	144256326	144256360	protein_coding	Mgmt	intron	ENSMUSG00000054612	ProperStrand	14	chr9	15118323	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-6.2956
chr13	72763667	72763684	antisense	Gm20554	.	ENSMUSG00000093587	NonProperStrand	40	chr7	130144916	130144967	protein_coding	Rbbp6	exon	ENSMUSG00000030779	ProperStrand	46	1	-14.6718
chr1	89095707	89095723	protein_coding	Chrnd	utr3	ENSMUSG00000026251	NonProperStrand	8	chr2	22444358	22444458	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-11.9052
chrX	103392237	103393275	protein_coding	Pgk1	exon	ENSMUSG00000062070	ProperStrand	484	chr14	76247720	76247834	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-1.6331
chr17	35089343	35089402	processed_transcript	1110038B12Rik	.	ENSMUSG00000092203	ProperStrand	126	chr5	143142883	143142917	protein_coding	Wipi2	exon	ENSMUSG00000029578	ProperStrand	49	2	-20.6946
chr2	164332039	164332192	protein_coding	Pigt	exon	ENSMUSG00000017721	ProperStrand	45	chr11	59653407	59653424	protein_coding	Nt5m	intron	ENSMUSG00000032615	NonProperStrand	9	1	-17.7210
chr8	74989120	74989208	protein_coding	Cherp	intron	ENSMUSG00000052488	ProperStrand	43	chr7	116663692	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.0984
chr9	79964501	79964542	protein_coding	Senp6	exon	ENSMUSG00000034252	ProperStrand	110	chr15	98350202	98350251	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	2	-6.1277
chr3	90196219	90196243	protein_coding	Ints3	exon	ENSMUSG00000027933	ProperStrand	87	chr8	73419657	73419775	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.4781
chr7	26472435	26472451	protein_coding	Tgfb1	utr5	ENSMUSG00000002603	NonProperStrand	154	chr7	52378433	52378480	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	2	-10.6958
chr10	55734811	55734827	protein_coding	D630037F22Rik	utr3	ENSMUSG00000038122	ProperStrand	4	chr7	116664794	116664854	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-7.9535
chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	chr1	145626057	145626120	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-3.7508
chr9	108959637	108959737	protein_coding	Shisa5	utr3	ENSMUSG00000025647	ProperStrand	43	chr1	162968258	162968294	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-7.4806
chr4	131865855	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr4	10801278	10801295	tRNA	tRNA16-SerAGA	.	159006	ProperStrand	7	4	-19.0491
chr1	88247799	88247871	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	chr11	98878395	98878455	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	6	-2.2634
chr4	43505652	43505683	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr8	24050459	24050559	protein_coding	Myst3	exon	ENSMUSG00000031540	ProperStrand	111	1	-2.0187
chr14	51460950	51460966	protein_coding	Tep1	exon	ENSMUSG00000006281	ProperStrand	37	chr3	89219873	89220254	protein_coding	Cks1b	exon	ENSMUSG00000028044	ProperStrand	10	1	-17.6667
chr15	98478021	98478962	protein_coding	Ddx23	exon	ENSMUSG00000003360	ProperStrand	63	chr7	117166726	117166816	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	3	-11.2263
chr6	64033340	64033358	protein_coding	Grid2	intron	ENSMUSG00000071424	ProperStrand	20	chr16	23111382	23111445	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.0472
chr4	140581348	140581428	protein_coding	Crocc	exon	ENSMUSG00000040860	ProperStrand	44	chr9	120037992	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-5.3073
chr5	143665111	143665156	protein_coding	Actb	utr3	ENSMUSG00000029580	NonProperStrand	7	chr3	123210854	123210934	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	NonProperStrand	45	1	-18.2535
chr6	39601744	39610942	protein_coding	Braf	exon	ENSMUSG00000002413	ProperStrand	7	chr7	29136541	29136621	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-6.5022
chr14	33005110	33005210	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	chr4	3762227	3762291	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	1	-0.8984
chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	chr11	62590601	62590631	snoRNA	ENSMUSG00000064692_SNORA67	.	ENSMUSG00000064692	ProperStrand	185	1	-5.9490
chr2	57873768	57873785	protein_coding	Galnt5	intron	ENSMUSG00000026828	NonProperStrand	9	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-12.4764
chr11	59025695	59025785	protein_coding	Arf1	utr3	ENSMUSG00000048076	ProperStrand	52	chr1	162965531	162965554	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.5385
chr17	36392904	36392994	protein_coding	Rpp21	exon	ENSMUSG00000024446	ProperStrand	2	chr4	131908814	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-8.0336
chr10	82347740	82347770	protein_coding	Txnrd1	exon	ENSMUSG00000020250	ProperStrand	47	chr4	131908280	131908344	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.7849
chr14	24593646	24593662	protein_coding	Kcnma1	intron	ENSMUSG00000063142	NonProperStrand	104	chr9	15119967	15119993	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-6.1645
chr10	87892264	87892280	protein_coding	Gnptab	exon	ENSMUSG00000035311	ProperStrand	65	chr10	23505148	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.1260
chr7	146684406	146684425	protein_coding	Inpp5a	intron	ENSMUSG00000025477	ProperStrand	166	chr5	108336363	108336426	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-2.9844
chr18	84255175	84255195	protein_coding	Tshz1	utr5	ENSMUSG00000046982	NonProperStrand	3	chr11	74718968	74719010	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	1	-15.4233
chr19	47343306	47343344	protein_coding	Sh3pxd2a	exon	ENSMUSG00000053617	ProperStrand	57	chr6	115758011	115758122	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-5.5723
chr9	57575097	57575176	protein_coding	Edc3	exon	ENSMUSG00000038957	ProperStrand	19	chr4	131908709	131908799	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.0948
chr8	121199042	121199058	protein_coding	Cdh13	exon	ENSMUSG00000031841	ProperStrand	60	chr3	123210877	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-3.7286
chr3	157729230	157729320	protein_coding	Lrrc40	utr3	ENSMUSG00000063052	ProperStrand	147	chr3	95980321	95980401	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-5.1004
chr18	69843468	69843556	protein_coding	Tcf4	utr3	ENSMUSG00000053477	ProperStrand	13	chr11	97642957	97643047	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-5.3468
chr5	115692431	115692531	protein_coding	Rnf10	exon	ENSMUSG00000041740	ProperStrand	95	chr11	69481335	69481397	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-2.3951
chr13	9833580	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr8	55606092	55606151	antisense	Spcs3	.	ENSMUSG00000054408	ProperStrand	30	1	-6.3165
chr19	3610151	3612200	protein_coding	Lrp5	exon	ENSMUSG00000024913	ProperStrand	145	chr16	23111374	23111461	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-1.3813
chr6	66980991	66981007	SINE	MIR	MIR	chr6MIR66980942	ProperStrand	1	chr17	34089208	34089239	protein_coding	Rps18	exon	ENSMUSG00000008668	ProperStrand	111	1	-inf
chr17	34089214	34089423	protein_coding	Rps18	exon	ENSMUSG00000008668	ProperStrand	111	chr16	23111373	23111477	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-1.1737
chr5	57452012	57452029	LINE	Lx6	L1	chr5Lx657451381	ProperStrand	1	chr4	148318965	148318996	protein_coding	Casz1	utr3	ENSMUSG00000028977	ProperStrand	27	1	-inf
chr1	184206871	184206971	protein_coding	Degs1	utr3	ENSMUSG00000038633	ProperStrand	19	chr7	117166827	117166862	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-8.5167
chr18	64660053	64660119	protein_coding	Nars	utr3	ENSMUSG00000024587	ProperStrand	97	chr3	68889257	68889287	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-2.4126
chr7	109141741	109141793	protein_coding	Numa1	exon	ENSMUSG00000066306	ProperStrand	148	chr7	116663665	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-2.1893
chr5	130295411	130295505	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	chr2	166890780	166890857	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	2	-4.4595
chr18	61725438	61725538	protein_coding	Csnk1a1	intron	ENSMUSG00000024576	ProperStrand	64	chr19	8799834	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-4.8222
chr9	66316827	66316883	protein_coding	Herc1	exon	ENSMUSG00000038664	ProperStrand	81	chr18	75161559	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-6.6076
chr1	24620987	24621035	protein_coding	Gm10925	utr3	ENSMUSG00000090378	ProperStrand	320	chr12	106269467	106269557	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-1.3030
chr5	20867566	20867595	protein_coding	Ccdc146	intron	ENSMUSG00000064280	NonProperStrand	4	chr4	131866174	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-9.1999
chr4	43505656	43505720	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr17	47626554	47626570	protein_coding	Taf8	utr3	ENSMUSG00000023980	ProperStrand	25	2	-7.8499
chr9	95377884	95379687	protein_coding	2610101N10Rik	exon	ENSMUSG00000032407	ProperStrand	56	chr19	56546303	56546319	protein_coding	9930023K05Rik	exon	ENSMUSG00000035818	NonProperStrand	9	1	-17.2770
chr10	96067564	96067581	LTR	RMER19B	ERVK	chr10RMER19B96067159	ProperStrand	12	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.6729
chr3	108377047	108377066	protein_coding	Taf13	intron	ENSMUSG00000048100	ProperStrand	3	chr16	23110841	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr1	182836813	182836972	protein_coding	Pycr2	exon	ENSMUSG00000026520	ProperStrand	89	chr6	45965480	46120177	protein_coding	Cntnap2	exon	ENSMUSG00000039419	NonProperStrand	283	1	-9.4131
chr9	7933125	7933225	protein_coding	Yap1	utr3	ENSMUSG00000053110	ProperStrand	68	chr13	65259666	65259716	snoRNA	ENSMUSG00000089161_SNORA48	.	ENSMUSG00000089161	ProperStrand	28	1	-14.5957
chr2	145732304	145732404	protein_coding	Naa20	intron	ENSMUSG00000002728	ProperStrand	9	chr15	79091672	79091688	protein_coding	Baiap2l2	exon	ENSMUSG00000018126	NonProperStrand	6	6	-inf
chr8	52025126	52025216	LINE	L1Md_F2	L1	chr8L1Md_F252025151	ProperStrand	1	chr8	52024892	52024972	LINE	L1_Mur1	L1	chr8L1_Mur152024660	NonProperStrand	1	1	-inf
chr4	116827023	116827257	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	chrX	51079024	51079041	protein_coding	Zfp36l3	exon	ENSMUSG00000059334	ProperStrand	13	1	-13.4750
chr1	16092825	16092899	protein_coding	Rpl7	exon	ENSMUSG00000043716	ProperStrand	93	chr16	23110515	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.7484
chrX	7682905	7682921	processed_transcript	Gm6787	.	ENSMUSG00000086404	NonProperStrand	2	chr6	71832577	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-13.0331
chr16	21222715	21222787	protein_coding	Ephb3	utr3	ENSMUSG00000005958	ProperStrand	23	chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	1	-11.5194
chr6	118473210	118473310	protein_coding	Ankrd26	utr3	ENSMUSG00000007827	ProperStrand	8	chr12	83441778	83441847	protein_coding	Sipa1l1	utr5	ENSMUSG00000042700	ProperStrand	84	1	-16.7694
chr9	64024964	64024998	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	chr7	52382014	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-2.7624
chr1	108171213	108171293	protein_coding	Phlpp1	intron	ENSMUSG00000044340	ProperStrand	67	chr2	158182178	158182268	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-4.7894
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr11	116938705	116938751	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-0.8896
chr7	53959410	53959426	protein_coding	Saal1	exon	ENSMUSG00000006763	ProperStrand	6	chr3	88497850	88497913	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-12.2092
chr7	142888333	142888513	protein_coding	Mki67	exon	ENSMUSG00000031004	ProperStrand	286	chr7	29136525	29136655	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	11	-11.6221
chr7	135116228	135117918	protein_coding	Fus	exon	ENSMUSG00000030795	ProperStrand	162	chr4	22415358	22415374	protein_coding	Pou3f2	utr5	ENSMUSG00000052621	ProperStrand	13	1	-14.4407
chr17	36029645	36029673	protein_coding	2310061I04Rik	utr3	ENSMUSG00000050705	ProperStrand	8	chr16	43886790	43886845	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	1	-12.2058
chr6	124691242	124691283	protein_coding	Grcc10	utr5	ENSMUSG00000072772	ProperStrand	88	chr10	23505155	23505204	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-0.7587
chr10	117129686	117129776	protein_coding	Mdm2	exon	ENSMUSG00000020184	ProperStrand	17	chr6	71832586	71832666	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-8.1349
chr9	64023471	64023499	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	chrX	152009278	152009294	protein_coding	Ptchd1	exon	ENSMUSG00000041552	NonProperStrand	294	1	-5.5359
chr4	61946184	61946205	protein_coding	Slc31a2	intron	ENSMUSG00000066152	ProperStrand	2	chr1	162965980	162966033	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-10.9191
chr18	67994545	67994577	protein_coding	Cep192	exon	ENSMUSG00000024542	ProperStrand	59	chr16	23111733	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-5.3748
chr8	3642156	3642172	protein_coding	Stxbp2	intron	ENSMUSG00000004626	NonProperStrand	73	chr3	94996909	94996962	protein_coding	Gabpb2	intron	ENSMUSG00000038766	ProperStrand	39	1	-13.7856
chr2	147011593	147011610	protein_coding	Nkx2-2	exon	ENSMUSG00000027434	ProperStrand	47	chr3	123210854	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-6.5739
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr4	116827660	116828219	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	4	-17.4841
chr19	14619296	14619327	protein_coding	Tle4	exon	ENSMUSG00000024642	ProperStrand	23	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	1	-8.9552
chr1	145497018	145497035	protein_coding	Cdc73	intron	ENSMUSG00000026361	ProperStrand	22	chr7	116664812	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-4.3947
chr6	88862152	88862184	protein_coding	Tpra1	utr3	ENSMUSG00000002871	ProperStrand	5	chr5	108336363	108336406	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-16.1165
chr1	165178293	165178309	protein_coding	Prrx1	utr3	ENSMUSG00000026586	NonProperStrand	28	chr14	34776834	34776850	protein_coding	Rbp3	utr3	ENSMUSG00000041534	NonProperStrand	41	1	-15.6376
chrX	132674594	132674661	protein_coding	Bex4	exon	ENSMUSG00000047844	ProperStrand	13	chr17	26360456	26360546	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	1	-13.1474
chr9	120297446	120326268	protein_coding	Myrip	exon	ENSMUSG00000041794	ProperStrand	25	chr6	71832629	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-7.3516
chr18	43144721	43144737	protein_coding	Ppp2r2b	intron	ENSMUSG00000024500	NonProperStrand	95	chr8	32260335	32260422	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-3.7612
chr9	110518867	110518957	protein_coding	Setd2	intron	ENSMUSG00000044791	ProperStrand	51	chr16	36985753	36985843	protein_coding	Fbxo40	intron	ENSMUSG00000047746	ProperStrand	1	1	-inf
chr6	142441025	142441053	protein_coding	Ldhb	exon	ENSMUSG00000030246	ProperStrand	224	chr9	120039533	120039623	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	5	-6.9208
chr16	7246573	7246593	protein_coding	Rbfox1	intron	ENSMUSG00000008658	NonProperStrand	7	chr15	77597977	77597993	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	1	-13.2329
chr5	116039119	116039246	protein_coding	Gcn1l1	exon	ENSMUSG00000041638	ProperStrand	408	chr19	8799022	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	4	-8.3496
chr9	65756911	65756928	protein_coding	Csnk1g1	utr5	ENSMUSG00000032384	ProperStrand	31	chr19	8800413	8800438	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-4.7823
chr12	86148855	86148945	protein_coding-noncoding	Ltbp2	utr3	ENSMUSG00000002020	NonProperStrand	1	chr12	86148655	86148735	protein_coding	Ltbp2	intron	ENSMUSG00000002020	NonProperStrand	4	1	-inf
chr2	31866584	31866745	protein_coding	Nup214	exon	ENSMUSG00000001855	ProperStrand	62	chr16	23111741	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-3.3854
chr9	37457641	37457731	protein_coding	Tbrg1	exon	ENSMUSG00000011114	ProperStrand	56	chr17	24857717	24857797	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.4132
chr15	5067418	5067638	protein_coding	Rpl37	exon	ENSMUSG00000041841	ProperStrand	69	chr16	23111695	23111785	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	7	-13.5811
chr11	50044320	50044342	protein_coding	Mgat4b	exon	ENSMUSG00000036620	ProperStrand	10	chr5	143755203	143755219	protein_coding	Rnf216	exon	ENSMUSG00000045078	ProperStrand	38	1	-17.9793
chr11	87913128	87913145	processed_transcript	2210416O15Rik	.	ENSMUSG00000087498	ProperStrand	76	chr1	59761674	59761714	snoRNA	ENSMUSG00000089093_Snord11	.	ENSMUSG00000089093	ProperStrand	193	1	-10.4945
chr5	59760480	59760570	LINE	L1_Mus4	L1	chr5L1_Mus459759581	ProperStrand	1	chrX	39737786	39737866	LINE	L1_Mus3	L1	chrXL1_Mus339736683	ProperStrand	1	1	-inf
chr16	85802546	85802563	protein_coding	Adamts1	exon	ENSMUSG00000022893	ProperStrand	102	chr11	6428077	6428169	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-4.0386
chr14	72961399	72961489	protein_coding	Fndc3a	exon	ENSMUSG00000033487	ProperStrand	84	chr5	121655017	121655097	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.1314
chr14	67691091	67691156	protein_coding	Ppp2r2a	utr5	ENSMUSG00000022052	ProperStrand	45	chr17	13112531	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-5.1358
chr16	48289445	48291170	protein_coding	Dppa4	exon	ENSMUSG00000058550	ProperStrand	13	chr2	32818804	32818884	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-8.5431
chr10	121242090	121244926	protein_coding	Srgap1	exon	ENSMUSG00000020121	NonProperStrand	80	chr8	13159389	13159405	protein_coding	Lamp1	exon	ENSMUSG00000031447	ProperStrand	92	1	-11.8768
mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr16	59555214	59555230	protein_coding	Crybg3	utr5	ENSMUSG00000022723	ProperStrand	18	1	-8.3164
chrX	93136011	93136027	protein_coding	Las1l	exon	ENSMUSG00000057421	ProperStrand	248	chr2	63936035	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-5.0687
chr11	108204937	108204953	protein_coding	Prkca	exon	ENSMUSG00000050965	ProperStrand	48	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-6.2825
chr16	33865607	33865695	protein_coding	Itgb5	exon	ENSMUSG00000022817	ProperStrand	49	chr9	120038608	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.4063
chr6	97497429	97497501	snoRNA	ENSMUSG00000064724_SNORA63	.	ENSMUSG00000064724	ProperStrand	35	chr8	73419669	73419769	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.1302
chr9	78215823	78215913	protein_coding	Dppa5a	utr5	ENSMUSG00000060461	ProperStrand	79	chr18	35716760	35716840	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.7309
chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	chr19	8798484	8798536	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-1.5535
chr11	80415108	80415125	protein_coding	Myo1d	exon	ENSMUSG00000035441	ProperStrand	144	chr9	78327842	78327894	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-4.6302
chr12	111863737	111891632	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr1	72896161	72898625	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	4	-14.9461
chr4	86500776	86500827	protein_coding	Rps6	exon	ENSMUSG00000028495	ProperStrand	263	chr10	127982585	127983890	protein_coding	Zc3h10	utr5	ENSMUSG00000039810	NonProperStrand	3	1	-16.7535
chr8	13174617	13174670	protein_coding	Lamp1	utr3	ENSMUSG00000031447	ProperStrand	92	chr16	23110539	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.7651
chr2	111323707	111323723	protein_coding	Olfr1289	exon	ENSMUSG00000061195	NonProperStrand	3	chr17	24857800	24857848	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-14.1521
chr17	46285129	46285145	protein_coding	Mad2l1bp	exon	ENSMUSG00000034509	NonProperStrand	67	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-7.5194
chr2	29786685	29786761	protein_coding	Odf2	utr3	ENSMUSG00000026790	ProperStrand	58	chr9	15119646	15119736	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-4.7069
chr9	49311675	49311692	protein_coding	Ncam1	utr3	ENSMUSG00000039542	ProperStrand	18	chr4	131908368	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-5.9403
chr3	123039527	123045973	protein_coding	Sec24d	exon	ENSMUSG00000039234	ProperStrand	22	chr11	62416578	62416642	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-7.1558
chr17	35299563	35299639	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	chr11	106362619	106362635	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	2	-0.7125
chr15	96522122	96522222	protein_coding	Slc38a2	exon	ENSMUSG00000022462	ProperStrand	133	chr9	120038649	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.7077
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr15	82980145	82980225	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	3	-3.0868
chr18	34987111	34987211	protein_coding	Kdm3b	exon	ENSMUSG00000038773	ProperStrand	80	chr18	35716844	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.7116
chr9	62947471	62947551	LINE	L1MB5	L1	chr9L1MB562947469	NonProperStrand	1	chr9	62947199	62947289	SINE	B3A	B2	chr9B3A62947215	NonProperStrand	1	1	-inf
chr5	54509841	54509857	protein_coding	Stim2	exon	ENSMUSG00000039156	NonProperStrand	22	chr13	51743579	51743662	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-8.8767
chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	chr13	97420642	97420672	protein_coding	Hmgcr	intron	ENSMUSG00000021670	ProperStrand	56	1	-10.0122
chr7	139116952	139117001	protein_coding	Fgfr2	intron	ENSMUSG00000030849	ProperStrand	100	chr7	118219575	118219608	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-3.2241
chr13	59818795	59818811	protein_coding	Gm4934	exon	ENSMUSG00000091311	ProperStrand	4	chr16	23111690	23111714	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-7.1763
chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	chr16	23111375	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	7	-3.3098
chr4	129662257	129662278	protein_coding	Bai2	utr5	ENSMUSG00000028782	ProperStrand	119	chr3	123210865	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	4	-4.8341
chr6	44909108	44909127	LINE	Lx5	L1	chr6Lx544908649	ProperStrand	2	chr17	39985563	39985615	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	2	-inf
chr5	134570738	134570818	DNA	MER33	MER1_type	chr5MER33134570657	NonProperStrand	1	chr5	134571045	134571135	Satellite	ZP3AR	Satellite	chr5ZP3AR134571043	ProperStrand	1	1	-inf
chr18	33987797	33988406	protein_coding	Epb4.1l4a	exon	ENSMUSG00000024376	ProperStrand	16	chr4	131908236	131908300	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.6705
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr6	134668555	134668655	protein_coding	Dusp16	exon	ENSMUSG00000030203	ProperStrand	27	1	-7.9650
chr11	72785942	72786026	protein_coding	Atp2a3	exon	ENSMUSG00000020788	NonProperStrand	2	chr12	17552948	17553048	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	NonProperStrand	16	1	-inf
chr10	79171447	79171464	protein_coding	Bsg	exon	ENSMUSG00000023175	NonProperStrand	3	chr17	27699935	27699968	protein_coding	Hmga1	utr3	ENSMUSG00000046711	ProperStrand	180	1	-17.6080
chr17	43843088	43843104	protein_coding	Cyp39a1	intron	ENSMUSG00000023963	NonProperStrand	81	chr9	120039623	120039675	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.7818
chr7	4960188	4960278	protein_coding	Fiz1	exon	ENSMUSG00000061374	ProperStrand	37	chr16	23111394	23111474	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.9851
chr9	44582245	44582345	protein_coding	Ift46	utr5	ENSMUSG00000002031	ProperStrand	28	chr3	85934093	85934116	protein_coding	Sh3d19	utr3	ENSMUSG00000028082	NonProperStrand	5	4	-20.5479
chr11	69214349	69214509	protein_coding	Kdm6b	exon	ENSMUSG00000018476	NonProperStrand	5	chr5	108334195	108334332	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	2	-15.9930
chr4	155546921	155546957	protein_coding	Agrn	exon	ENSMUSG00000041936	ProperStrand	175	chr2	32134645	32136249	protein_coding	Swi5	exon	ENSMUSG00000044627	ProperStrand	16	1	-13.8536
chr19	41969765	41969826	protein_coding	Rrp12	exon	ENSMUSG00000035049	ProperStrand	106	chr7	38354919	38354935	protein_coding	Zfp536	exon	ENSMUSG00000043456	NonProperStrand	236	1	-9.4255
chr18	75161534	75161596	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	chr4	86232356	86232456	snoRNA	ENSMUSG00000088958_Scarna8	.	ENSMUSG00000088958	ProperStrand	366	1	-3.7047
chr1	9715327	9715396	protein_coding	Vcpip1	exon	ENSMUSG00000045210	ProperStrand	34	chrX	143918832	143918922	snoRNA	ENSMUSG00000084421_SNORA35	.	ENSMUSG00000084421	ProperStrand	293	3	-18.8114
chr16	45095879	45095895	protein_coding	Ccdc80	exon	ENSMUSG00000022665	ProperStrand	15	chr16	23110527	23110563	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.0488
chr14	31827477	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	chr5	130300442	130300547	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	12	-1.0074
chr14	51460950	51460966	protein_coding	Tep1	exon	ENSMUSG00000006281	ProperStrand	37	chr1	162967510	162967566	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.3830
chr7	117166722	117166831	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	chr11	106362673	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	3	-1.3475
chrX	71589885	71589908	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr11	69483136	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	10	-10.2754
chr18	73749732	73749751	protein_coding	Mex3c	exon	ENSMUSG00000037253	ProperStrand	17	chr7	67125763	67125818	snoRNA	ENSMUSG00000089375_Snord107	.	ENSMUSG00000089375	ProperStrand	451	2	-19.1121
chr9	56747249	56747265	protein_coding	Cspg4	utr3	ENSMUSG00000032911	NonProperStrand	3	chr17	35089183	35089228	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-11.8056
chr9	78326341	78326494	protein_coding	Eef1a1	utr3	ENSMUSG00000037742	ProperStrand	1990	chr6	8056654	8077290	protein_coding	Col28a1	exon	ENSMUSG00000068794	ProperStrand	23	3	-18.1786
chr17	39985501	39985665	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr19	8799830	8799898	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	11	-5.0801
chr16	32231011	32231027	protein_coding	Fbxo45	utr3	ENSMUSG00000035764	ProperStrand	19	chr18	35716701	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-13.9609
chr2	158185586	158185666	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr5	135529901	135529991	snoRNA	ENSMUSG00000088008_SCARNA20	.	ENSMUSG00000088008	ProperStrand	139	1	-4.8455
chr3	144141680	144141697	protein_coding	Hs2st1	intron	ENSMUSG00000040151	NonProperStrand	31	chr8	73419722	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.3622
chr5	74489283	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr5	143010383	143010441	protein_coding	Radil	intron	ENSMUSG00000029576	NonProperStrand	1	1	-inf
chr1	88247768	88247877	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	chr2	26768383	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	7	-1.6037
chr18	38888535	38888625	protein_coding	Arhgap26	intron	ENSMUSG00000036452	ProperStrand	46	chr13	67393400	67393490	protein_coding	Zfp457	utr3	ENSMUSG00000055341	NonProperStrand	2	1	-inf
chr17	37348183	37348201	protein_coding	Olfr95	exon	ENSMUSG00000049561	NonProperStrand	1	chr10	23505221	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-inf
chr9	120615424	120615441	LTR	MLT1H	MaLR	chr9MLT1H120615297	ProperStrand	8	mmu-miR-6240	2	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	1	-10.0060
chr11	97489600	97489617	protein_coding	E130012A19Rik	exon	ENSMUSG00000043439	NonProperStrand	110	chr17	71990940	71990999	snoRNA	ENSMUSG00000092713_CT010429.1	.	ENSMUSG00000092713	ProperStrand	182	1	-9.8704
chr15	60661082	60661099	lincRNA	9930014A18Rik	exon	ENSMUSG00000044513	ProperStrand	54	chr4	114637522	114637621	protein_coding	Cmpk1	exon	ENSMUSG00000028719	ProperStrand	1	1	-inf
chr4	140759060	140759080	protein_coding	Fbxo42	utr3	ENSMUSG00000028920	NonProperStrand	4	chr17	13112471	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-10.1729
chrX	124438267	124438290	LTR	RLTR40	ERVK	chrXRLTR40124437886	ProperStrand	1	chr4	131866180	131866270	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-inf
chr11	102294590	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr15	98670769	98671010	protein_coding	Mll2	exon	ENSMUSG00000048154	ProperStrand	170	3	-15.4400
chr2	155404164	155404264	protein_coding	Acss2	intron	ENSMUSG00000027605	ProperStrand	11	chr16	23111453	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.1830
chr8	123193234	123196652	protein_coding	Cox4i1	exon	ENSMUSG00000031818	ProperStrand	31	chr5	130300482	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.6980
chr11	98878339	98878376	protein_coding-noncoding	Top2a	utr3	ENSMUSG00000020914	ProperStrand	18	chr4	149622663	149622763	protein_coding	Eno1	utr3	ENSMUSG00000063524	ProperStrand	432	1	-11.8022
chr8	13170084	13170174	protein_coding	Lamp1	intron	ENSMUSG00000031447	ProperStrand	92	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-8.0717
chr13	59932957	59932973	LINE	L1_Mur3	L1	chr13L1_Mur359932072	ProperStrand	32	chr7	29136525	29136575	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.4817
chr7	135115632	135115690	protein_coding	Fus	exon	ENSMUSG00000030795	ProperStrand	162	chr14	76247711	76247801	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-4.2127
chr9	22393633	22393723	protein_coding	Bbs9	intron	ENSMUSG00000035919	NonProperStrand	9	chr11	82776068	82776158	protein_coding	Slfn5	utr3	ENSMUSG00000054404	ProperStrand	2	1	-inf
chr18	42805538	42805554	protein_coding	Ppp2r2b	exon	ENSMUSG00000024500	NonProperStrand	95	chr4	155033655	155033803	protein_coding	Mib2	exon	ENSMUSG00000029060	ProperStrand	21	1	-14.5164
chr17	23897171	23897236	protein_coding	Flywch1	exon	ENSMUSG00000040097	ProperStrand	15	chr4	131908350	131908440	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	7	-21.7450
chr4	133709727	133709827	protein_coding	Ccdc21	exon	ENSMUSG00000037443	ProperStrand	112	chr1	46078109	46078129	protein_coding	Gm4776	utr3	ENSMUSG00000044457	NonProperStrand	24	1	-13.9178
chrX	135510687	135510704	protein_coding	Nrk	exon	ENSMUSG00000052854	ProperStrand	24	chrX	34622913	34623025	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-4.9020
chr1	182590008	182590025	protein_coding	Lin9	intron	ENSMUSG00000058729	NonProperStrand	1	chr2	26494780	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-inf
chr9	20745901	20745968	protein_coding	Dnmt1	exon	ENSMUSG00000004099	ProperStrand	91	chr7	116664802	116664892	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.8616
chr4	76614453	76614470	protein_coding	Ptprd	intron	ENSMUSG00000028399	ProperStrand	198	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-5.3857
chr18	21184881	21184928	protein_coding	Rnf138	utr3	ENSMUSG00000024317	ProperStrand	12	chr11	62416995	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	3	-21.6247
chr3	131026075	131026162	protein_coding	Sgms2	exon	ENSMUSG00000050931	ProperStrand	4	chrX	34622946	34623036	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-14.2816
chr5	143666042	143666078	protein_coding	Actb	exon	ENSMUSG00000029580	ProperStrand	446	chr2	69820290	69820307	protein_coding	Ubr3	intron	ENSMUSG00000044308	NonProperStrand	12	1	-12.5784
chr2	139986129	139986183	protein_coding	Esf1	exon	ENSMUSG00000045624	ProperStrand	16	chr1	162966214	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	4	-inf
chr1	112029275	112029293	protein_coding	Cdh7	intron	ENSMUSG00000026312	NonProperStrand	3	chr6	13580628	13580702	protein_coding	B630005N14Rik	exon	ENSMUSG00000042742	ProperStrand	7	1	-inf
chr7	63234732	63234748	protein_coding	Nipa1	utr3	ENSMUSG00000047037	ProperStrand	16	chr2	26768049	26768093	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	1	-11.0740
chr14	64522239	64522259	protein_coding	Pinx1	intron	ENSMUSG00000021958	ProperStrand	17	chr17	71200284	71200306	protein_coding	Tgif1	utr5	ENSMUSG00000047407	ProperStrand	64	1	-15.7376
chr19	5671616	5671716	protein_coding	Pcnxl3	exon	ENSMUSG00000054874	ProperStrand	96	chr10	79756764	79756809	protein_coding	Rps15	exon	ENSMUSG00000063457	ProperStrand	119	1	-10.9937
chr12	111874594	111891633	protein_coding	Dync1h1	intron	ENSMUSG00000018707	ProperStrand	648	chr5	108336363	108336461	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	5	-5.7635
chr16	92392546	92392612	protein_coding	Rcan1	utr3	ENSMUSG00000022951	ProperStrand	9	chr5	130300465	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-6.1422
chr4	43505835	43505925	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr12	113010708	113010769	protein_coding	Klc1	exon	ENSMUSG00000021288	ProperStrand	35	1	-4.0672
chr5	151356867	151356912	protein_coding	Brca2	exon	ENSMUSG00000041147	ProperStrand	75	chr10	127521200	127521270	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	1	-8.3473
chr12	75033370	75033386	lincRNA	Gm15283	exon	ENSMUSG00000087700	ProperStrand	30	chr5	108336363	108336422	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-6.2415
chr1	72636014	72636077	protein_coding	Smarcal1	intron	ENSMUSG00000039354	ProperStrand	23	chr11	63721365	63721382	protein_coding	Hs3st3b1	intron	ENSMUSG00000070407	ProperStrand	10	1	-18.7819
chr12	50485930	50485947	protein_coding	Foxg1	exon	ENSMUSG00000020950	NonProperStrand	26	chr14	68295426	68295531	protein_coding	Cdca2	exon	ENSMUSG00000048922	ProperStrand	50	1	-15.3661
chr6	72070683	72070705	protein_coding	St3gal5	intron	ENSMUSG00000056091	NonProperStrand	11	chr7	148634754	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	4	-inf
chr7	28294249	28294271	protein_coding	Prx	intron	ENSMUSG00000053198	NonProperStrand	4	chr1	162967489	162967555	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-14.7797
chr6	114260511	114260527	protein_coding	Slc6a1	exon	ENSMUSG00000030310	NonProperStrand	147	chr5	121655016	121655062	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.1661
chr4	151390041	151390058	protein_coding	Klhl21	utr3	ENSMUSG00000073700	ProperStrand	16	chr2	91436228	91436334	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	2	-16.1299
chr7	30231479	30231592	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	chr4	122968678	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	2	-3.8288
chr8	73996011	73996104	protein_coding	Dda1	exon	ENSMUSG00000074247	NonProperStrand	10	chr16	23110894	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.7978
chr6	29559651	29559680	protein_coding	Tnpo3	utr5	ENSMUSG00000012535	ProperStrand	58	chr11	103256283	103256364	protein_coding	Plekhm1	exon	ENSMUSG00000034247	ProperStrand	23	1	-15.3178
chrX	101017112	101017128	protein_coding	Slc16a2	exon	ENSMUSG00000033965	ProperStrand	35	chr4	88826901	88826931	protein_coding	Mtap	utr3	ENSMUSG00000062937	ProperStrand	10	1	-18.0352
chr15	99842439	99842499	protein_coding	Larp4	exon	ENSMUSG00000023025	ProperStrand	41	chr2	155642598	155642614	protein_coding	Mmp24	utr3	ENSMUSG00000027612	ProperStrand	3	1	-inf
chr9	112088269	112088423	protein_coding-noncoding	Arpp21	utr3	ENSMUSG00000032503	ProperStrand	28	chr3	123210930	123210985	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.3984
chr12	32396184	32396229	protein_coding	Cog5	intron	ENSMUSG00000035933	ProperStrand	16	chr10	23505151	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.4264
chr9	61264824	61264932	protein_coding	Tle3	utr3	ENSMUSG00000032280	ProperStrand	88	chr17	24730865	24730881	protein_coding	Pkd1	exon	ENSMUSG00000032855	ProperStrand	61	1	-12.5098
chr11	120129841	120145435	protein_coding	Bahcc1	exon	ENSMUSG00000039741	ProperStrand	118	chr16	23110828	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	14	-9.1626
chr4	134876906	134876967	protein_coding	Srrm1	utr3	ENSMUSG00000028809	ProperStrand	142	chr1	93263063	93263079	protein_coding	Fam132b	exon	ENSMUSG00000047443	NonProperStrand	98	1	-10.5984
chr13	95223812	95223828	protein_coding	Ap3b1	intron	ENSMUSG00000021686	NonProperStrand	24	chr5	151755616	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-9.5860
chr9	65542262	65642467	protein_coding	Zfp609	exon	ENSMUSG00000040524	ProperStrand	87	chr4	131908687	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	22	-19.3814
chrX	35918270	35925604	protein_coding	Cul4b	utr5	ENSMUSG00000031095	ProperStrand	31	chr17	13112529	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	2	-9.5845
chr9	122741724	122741755	protein_coding	D9Ertd402e	intron	ENSMUSG00000046603	ProperStrand	3	chr5	111121066	111121126	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	3	-inf
chr9	43921925	43921942	lincRNA	Gm3906	intron	ENSMUSG00000092003	NonProperStrand	41	chr7	54106300	54106382	protein_coding	Ldha	exon	ENSMUSG00000063229	ProperStrand	280	1	-10.9936
chr7	117189863	117189922	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chrX	5684086	5684132	rRNA	n-R5s2	.	ENSMUSG00000075918	ProperStrand	25	1	-7.9590
chr13	97420584	97420660	protein_coding	Hmgcr	intron	ENSMUSG00000021670	ProperStrand	56	chr9	120038613	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.1631
chr17	35089181	35089207	processed_transcript	1110038B12Rik	.	ENSMUSG00000092203	ProperStrand	126	chr2	29760730	29760784	protein_coding	Odf2	intron	ENSMUSG00000026790	ProperStrand	58	2	-18.3904
chr2	167296972	167297030	protein_coding	Slc9a8	exon	ENSMUSG00000039463	ProperStrand	26	chr8	73419657	73419675	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.7022
chr16	23110469	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	NonProperStrand	16	chr9	15118283	15118312	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	NonProperStrand	11	1	-18.9924
chr9	48148721	48148737	protein_coding	Fam55b	utr5	ENSMUSG00000032028	ProperStrand	25	chr4	131865855	131865927	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.2649
chr4	138996735	138997194	protein_coding	Ubr4	exon	ENSMUSG00000066036	ProperStrand	304	chr18	33954843	33954923	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-0.9258
chr6	83318070	83318086	protein_coding	Tet3	exon	ENSMUSG00000034832	NonProperStrand	93	chr11	97643179	97643665	protein_coding	Rpl23	exon	ENSMUSG00000071415	ProperStrand	920	1	-6.9845
chr13	48964909	48965009	protein_coding	Phf2	intron	ENSMUSG00000038025	ProperStrand	5	chr10	23505151	23505215	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-5.7809
chr3	88730225	88730952	protein_coding	Dap3	exon	ENSMUSG00000068921	ProperStrand	58	chr7	116663714	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.5700
chr7	106628179	106628217	snoRNA	ENSMUSG00000064966_Snord15b	.	ENSMUSG00000064966	ProperStrand	74	chr11	69483189	69483279	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.0999
chr9	63966633	63966649	protein_coding	Lctl	exon	ENSMUSG00000032401	NonProperStrand	3	chr16	23110828	23110892	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-9.5778
chr18	41356149	41356185	miRNA	Mir5097	dead	ENSMUSG00000093361	ProperStrand	221	chr4	138748909	138794873	protein_coding	Capzb	exon	ENSMUSG00000028745	ProperStrand	44	1	-11.3242
chr15	38226652	38226742	protein_coding	Klf10	exon	ENSMUSG00000037465	ProperStrand	33	chr12	106269402	106269482	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-5.2932
chr1	157819877	157819896	protein_coding	Cep350	intron	ENSMUSG00000033671	NonProperStrand	6	chr11	6428060	6428161	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-7.7732
chr13	44827265	44918779	protein_coding	Jarid2	exon	ENSMUSG00000038518	ProperStrand	372	chr2	144087350	144087440	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-3.0698
chrX	164877781	164877799	protein_coding	Frmpd4	intron	ENSMUSG00000049176	NonProperStrand	11	chr16	23111777	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.0138
chr11	42440243	42440259	protein_coding	Gabrb2	exon	ENSMUSG00000007653	ProperStrand	248	chr15	79908970	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-2.8167
chr9	21648711	21648794	protein_coding	Dock6	exon	ENSMUSG00000032198	ProperStrand	155	chr2	179658685	179658775	protein_coding	Taf4a	exon	ENSMUSG00000039117	ProperStrand	15	1	-14.2344
chr3	55435951	55435967	protein_coding	Nbea	exon	ENSMUSG00000027799	NonProperStrand	115	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-6.4486
chr11	120456377	120456440	protein_coding	Alyref	exon	ENSMUSG00000025134	ProperStrand	53	chr10	70867923	70867940	protein_coding	Ipmk	intron	ENSMUSG00000060733	NonProperStrand	6	1	-18.1770
chr10	60235042	60235097	protein_coding	Unc5b	exon	ENSMUSG00000020099	ProperStrand	25	chr11	6428141	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-8.0479
chr5	112758435	112758451	protein_coding	Tfip11	exon	ENSMUSG00000029345	ProperStrand	111	chr1	162966813	162966852	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-5.0566
chr5	64792049	64792070	LTR	MLT1H	MaLR	chr5MLT1H64791748	NonProperStrand	30	chr7	129312699	129312757	protein_coding	Plk1	exon	ENSMUSG00000030867	ProperStrand	146	1	-12.9310
chr11	22799986	22856419	protein_coding	Commd1	exon	ENSMUSG00000051355	ProperStrand	36	chr3	68889032	68889122	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-4.2090
chr2	79294703	79294746	protein_coding	Neurod1	exon	ENSMUSG00000034701	ProperStrand	7	chr4	122968659	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	2	-17.0578
chr3	88952697	88952713	protein_coding	Hcn3	exon	ENSMUSG00000028051	ProperStrand	40	chr15	79908972	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-6.2710
chrX	151648020	151648067	protein_coding	Sat1	utr3	ENSMUSG00000025283	ProperStrand	4	chr14	61398407	61398423	protein_coding	C1qtnf9	exon	ENSMUSG00000071347	ProperStrand	187	1	-16.7742
chr6	122841613	122841703	LTR	RLTR14	ERV1	chr6RLTR14122841417	ProperStrand	1	chr6	122841836	122841926	SINE	B4A	B4	chr6B4A122841761	ProperStrand	1	1	-inf
chr7	30525052	30525068	LTR	RLTR6-int	ERV1	chr7RLTR6-int30524190	NonProperStrand	3	chr8	72287171	72287187	protein_coding	Zfp866	utr3	ENSMUSG00000043090	NonProperStrand	134	1	-18.0816
chr7	20223575	20224287	protein_coding	Clptm1	exon	ENSMUSG00000002981	ProperStrand	109	chr17	83878034	83878134	protein_coding	Eml4	utr3	ENSMUSG00000032624	ProperStrand	50	1	-12.4813
chr6	115755704	115758010	protein_coding	Rpl32	intron	ENSMUSG00000057841	ProperStrand	137	chr16	23110462	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-2.2956
chr11	32112879	32112914	protein_coding	Rhbdf1	exon	ENSMUSG00000020282	ProperStrand	23	chr11	69481333	69481433	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.0170
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr14	8734494	8737037	protein_coding	Flnb	exon	ENSMUSG00000025278	ProperStrand	124	1	-7.2682
chr10	6063958	6063976	protein_coding	Akap12	intron	ENSMUSG00000038587	ProperStrand	1008	chr4	125842759	125844180	protein_coding	Thrap3	exon	ENSMUSG00000043962	ProperStrand	84	4	-inf
chr6	114260511	114260527	protein_coding	Slc6a1	exon	ENSMUSG00000030310	NonProperStrand	147	chr11	62416600	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-3.4704
chr7	71031382	71031417	protein_coding	Klf13	utr3	ENSMUSG00000052040	ProperStrand	28	chr17	24856620	24856739	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-7.9503
chr8	115228043	115228084	protein_coding	Cntnap4	intron	ENSMUSG00000031772	ProperStrand	8	chr7	29136523	29136575	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-10.2840
chr11	95911247	95911312	protein_coding	Ube2z	utr3	ENSMUSG00000014349	ProperStrand	41	chr8	129468800	129468873	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	4	-16.0247
chr2	180610252	180610270	lincRNA	Gm14342	intron	ENSMUSG00000086166	NonProperStrand	18	chr8	73419716	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-5.4264
chr1	94811729	94811746	protein_coding	Rnpepl1	utr5	ENSMUSG00000026269	NonProperStrand	3	chr4	68423440	68423456	protein_coding	Dbc1	exon	ENSMUSG00000028351	ProperStrand	78	1	-19.7305
chr4	123287983	123288055	protein_coding	Macf1	intron	ENSMUSG00000028649	ProperStrand	320	chr5	111121107	111121197	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-3.2383
chr9	78023109	78023144	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr4	147942790	147944575	protein_coding	Exosc10	exon	ENSMUSG00000017264	ProperStrand	20	1	-8.0753
chr17	35278407	35278507	protein_coding	Bag6	exon	ENSMUSG00000024392	ProperStrand	181	chr2	103897377	103897402	protein_coding	Fbxo3	utr3	ENSMUSG00000027180	ProperStrand	12	8	-inf
chr19	43269721	43269737	protein_coding	Hpse2	intron	ENSMUSG00000074852	NonProperStrand	48	chr19	8800084	8800129	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-8.0543
chr19	38869531	38869547	protein_coding	Noc3l	exon	ENSMUSG00000024999	NonProperStrand	149	chr11	62416601	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-3.4457
chr6	97133897	97133913	protein_coding	Uba3	utr3	ENSMUSG00000030061	NonProperStrand	1	chr1	88247746	88247780	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-inf
chr9	24549588	24549631	protein_coding	Tbx20	intron	ENSMUSG00000031965	NonProperStrand	110	chr7	116663696	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-4.4735
chr9	13649872	13649890	protein_coding	Fam76b	utr3	ENSMUSG00000037808	ProperStrand	23	chr15	82980074	82980164	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	16	-19.5154
chr2	124868781	124868801	Simple_repeat	(TATG)n	Simple_repeat	chr2(TATG)n124868743	NonProperStrand	2	chr15	37952137	37952155	protein_coding	Ubr5	exon	ENSMUSG00000037487	NonProperStrand	8	1	-19.9311
chr7	90771223	90771323	protein_coding	Tmc3	exon	ENSMUSG00000038540	ProperStrand	10	chr10	23505152	23505215	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-7.3782
chr15	77356785	77356801	protein_coding	Apol7c	exon	ENSMUSG00000044309	ProperStrand	197	chr11	106362313	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-3.5712
chr11	69380635	69380722	protein_coding	Wrap53	intron	ENSMUSG00000041346	ProperStrand	14	chr18	35716836	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.8493
chr10	23506278	23506317	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	chr13	90238584	90238667	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	1	-2.5399
chr10	79518830	79518983	protein_coding	Gpx4	utr3	ENSMUSG00000075706	ProperStrand	55	chr9	15118519	15118541	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	3	-19.7144
chrX	156573656	156573707	protein_coding	Pdha1	intron	ENSMUSG00000031299	ProperStrand	27	chr7	20370720	20371567	protein_coding	Cblc	exon	ENSMUSG00000040525	ProperStrand	3	1	-inf
chr3	17955155	17955172	protein_coding	Bhlhe22	exon	ENSMUSG00000025128	NonProperStrand	4	chr1	88252838	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-12.2943
chr2	179992144	179992501	protein_coding	Rps21	utr5	ENSMUSG00000039001	ProperStrand	46	chr5	130300521	130300551	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.9749
chr6	117867588	117869119	protein_coding	Hnrnpf	utr5	ENSMUSG00000042079	ProperStrand	147	chr11	62416576	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	3	-8.6173
chr9	95871872	95871972	protein_coding	Xrn1	intron	ENSMUSG00000032410	ProperStrand	12	chr2	26768368	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-8.8433
chr2	25296056	25296156	protein_coding	Abca2	exon	ENSMUSG00000026944	ProperStrand	57	chr7	52381973	52382010	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-6.8137
chr14	45949538	45949554	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	chr18	21054478	21054494	protein_coding	Trappc8	exon	ENSMUSG00000033382	ProperStrand	43	1	-10.5932
chr1	187090901	187090917	protein_coding	Rab3gap2	exon	ENSMUSG00000039318	ProperStrand	41	chr17	13112453	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	6	-21.4287
chr11	8334385	8334486	protein_coding	Tns3	utr3	ENSMUSG00000020422	ProperStrand	81	chr9	120038561	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	3	-6.6234
chr11	120148960	120148976	protein_coding	Bahcc1	exon	ENSMUSG00000039741	NonProperStrand	268	chr5	121655016	121655153	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	3	-3.8048
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr17	27559700	27559717	protein_coding	Grm4	utr3	ENSMUSG00000063239	ProperStrand	147	1	-6.8221
chr3	30950646	30950724	protein_coding	Prkci	utr3	ENSMUSG00000037643	ProperStrand	39	chr2	130101982	130102072	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	2	-10.0810
chr12	25393174	25393195	protein_coding	Rrm2	utr5	ENSMUSG00000020649	ProperStrand	65	chr4	131908356	131908416	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.3054
chr5	19754253	19754272	protein_coding	Magi2	intron	ENSMUSG00000040003	NonProperStrand	24	chr15	79913325	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-5.3491
chr4	56910571	56910629	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	chr13	21262123	21262159	tRNA	tRNA63-LeuAAG	.	1918591	ProperStrand	21	1	-8.2087
chr16	96290178	96290219	protein_coding	Brwd1	exon	ENSMUSG00000022914	ProperStrand	77	chr11	69483188	69483278	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-3.6747
chr4	57154472	57154489	protein_coding	Epb4.1l4b	intron	ENSMUSG00000028434	NonProperStrand	54	chr8	107165559	107165595	protein_coding	Fam96b	utr5	ENSMUSG00000031879	ProperStrand	21	1	-15.6375
chr17	23955820	23955838	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	chr7	80547651	80547667	protein_coding	Rgma	intron	ENSMUSG00000070509	ProperStrand	46	1	-12.0104
chr12	45013530	45013550	LINE	Lx8	L1	chr12Lx845013348	ProperStrand	2	chr2	37255620	37255660	snoRNA	ENSMUSG00000077756_Snord90	.	ENSMUSG00000077756	ProperStrand	167	1	-18.6768
chr4	43505657	43505721	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr2	131148492	131148514	protein_coding	Rnf24	intron	ENSMUSG00000048911	ProperStrand	11	1	-6.3578
chr4	131908321	131908342	lincRNA	Gm17300	exon	ENSMUSG00000091021	ProperStrand	109	chr7	25702003	25702103	protein_coding	Arhgef1	intron	ENSMUSG00000040940	NonProperStrand	6	3	-19.5911
chr10	20080835	20080859	protein_coding	Fam54a	utr3	ENSMUSG00000019992	ProperStrand	232	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-2.6981
chr8	90663848	90665587	protein_coding	Heatr3	exon	ENSMUSG00000031657	ProperStrand	24	chr17	34026359	34026459	protein_coding	Kifc1	intron	ENSMUSG00000079553	ProperStrand	47	1	-15.6865
chr6	122266514	122266564	protein_coding	M6pr	utr3	ENSMUSG00000007458	ProperStrand	56	chr4	116827133	116827183	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	4	-19.6444
chr14	33159736	33159953	protein_coding	Ogdhl	exon	ENSMUSG00000021913	ProperStrand	182	chr17	35299531	35299621	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	16	-19.8539
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr11	115999916	115999932	protein_coding	Mrpl38	exon	ENSMUSG00000020775	NonProperStrand	65	1	-7.6354
mmu-miR-2137	0	19	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	chr7	57041565	57041581	protein_coding	Prmt3	exon	ENSMUSG00000030505	ProperStrand	89	1	-10.7636
chr9	90639216	90639296	LTR	ORR1A4	MaLR	chr9ORR1A490639060	NonProperStrand	1	chr11	85916924	85917014	protein_coding	Brip1	intron	ENSMUSG00000034329	ProperStrand	16	1	-inf
chr5	115333788	115333878	SINE	B1_Mus1	Alu	chr5B1_Mus1115333765	ProperStrand	1	chr13	96017626	96017706	protein_coding	Pde8b	intron	ENSMUSG00000021684	NonProperStrand	13	1	-inf
mmu-miR-2137	1	20	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	chr7	125252679	125253481	protein_coding	Rps15a	exon	ENSMUSG00000008683	ProperStrand	28	1	-13.0974
chr2	26768368	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	chr11	69481333	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	24	-4.2416
chr5	116048839	116049135	protein_coding	Gcn1l1	exon	ENSMUSG00000041638	ProperStrand	408	chr1	37898095	37898111	protein_coding	Tsga10	exon	ENSMUSG00000060771	ProperStrand	79	1	-8.9225
chr8	83262831	83262848	protein_coding	Smarca5	exon	ENSMUSG00000031715	ProperStrand	115	chr11	63885336	63887052	protein_coding	Cox10	exon	ENSMUSG00000042148	NonProperStrand	187	1	-9.7272
chr5	23008537	23008593	protein_coding	Mll5	exon	ENSMUSG00000029004	ProperStrand	21	chr5	74489595	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-5.8101
chr15	79192636	79192726	protein_coding	Tmem184b	utr3	ENSMUSG00000009035	ProperStrand	37	chr11	69483151	69483231	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.3059
chr9	78023183	78023253	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr18	82806354	82808774	protein_coding	Zfp236	exon	ENSMUSG00000041258	ProperStrand	15	2	-13.8485
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr10	110918569	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	3	-1.2038
chr2	57900146	57900162	protein_coding	Ermn	utr3	ENSMUSG00000026830	ProperStrand	27	chr2	166888978	166889031	snoRNA	ENSMUSG00000077515_SNORD12	.	ENSMUSG00000077515	ProperStrand	191	1	-12.6062
chr1	15630549	15630566	protein_coding	Kcnb2	intron	ENSMUSG00000092083	NonProperStrand	10	chr7	116663633	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-5.9268
chr2	90235285	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	12086444	12086494	tRNA	tRNA109-ValTAC	.	459365	ProperStrand	96	2	-6.0740
chr14	51427142	51427445	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr8	32260334	32260422	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	4	-1.5667
chr8	108577295	108577375	protein_coding	Dus2l	exon	ENSMUSG00000031901	ProperStrand	7	chr17	56754454	56754702	protein_coding	Lonp1	exon	ENSMUSG00000041168	ProperStrand	83	1	-17.0448
chr17	80645132	80680724	protein_coding	Dhx57	exon	ENSMUSG00000035051	ProperStrand	20	chr4	131908688	131908778	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-13.7520
chr16	57391758	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr11	69482355	69482386	snoRNA	ENSMUSG00000089542_snoU6-77	.	ENSMUSG00000089542	ProperStrand	138	2	-9.9622
chr2	84979459	84979476	protein_coding	Aplnr	utr3	ENSMUSG00000044338	ProperStrand	13	chr18	35716684	35716761	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.9970
chr11	79247804	79247866	protein_coding	Nf1	intron	ENSMUSG00000020716	ProperStrand	42	chr9	120038468	120038531	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-6.2648
chr8	96767580	96767624	protein_coding	Nup93	exon	ENSMUSG00000032939	ProperStrand	43	chr16	23110456	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.0458
chr10	76543918	76548034	protein_coding	Col18a1	exon	ENSMUSG00000001435	ProperStrand	287	chr5	65213431	65213483	protein_coding	Klf3	exon	ENSMUSG00000029178	ProperStrand	56	1	-10.3151
chr8	27091218	27091234	protein_coding	4930444A02Rik	utr3	ENSMUSG00000037251	NonProperStrand	57	chr19	8799357	8799381	snoRNA	ENSMUSG00000065280_SNORD28	.	ENSMUSG00000065280	ProperStrand	269	1	-10.4088
chr10	20080842	20080858	protein_coding	Fam54a	utr3	ENSMUSG00000019992	ProperStrand	232	chr9	98488630	98488671	protein_coding	Copb2	utr3	ENSMUSG00000032458	ProperStrand	33	1	-11.8084
chr7	116663618	116663645	protein_coding-noncoding	Rpl27a	utr5	ENSMUSG00000046364	ProperStrand	57	chr16	30514154	30514171	protein_coding	Tmem44	utr3	ENSMUSG00000022537	ProperStrand	217	1	-10.8385
chr1	72301657	72301703	snRNA	ENSMUSG00000093333_AC120136.3	.	ENSMUSG00000093333	ProperStrand	68	chr4	131908688	131908739	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-2.0847
chr5	29581148	29584602	protein_coding	Lmbr1	exon	ENSMUSG00000010721	NonProperStrand	4	chr11	69483172	69483237	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-7.8378
chr5	135721873	135721903	protein_coding	Baz1b	utr3	ENSMUSG00000002748	ProperStrand	83	chr4	74926520	74926567	snoRNA	ENSMUSG00000065884_SNORA63	.	ENSMUSG00000065884	ProperStrand	12	2	-19.7518
chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	chr4	123028385	123029133	protein_coding	Macf1	exon	ENSMUSG00000028649	ProperStrand	320	1	-6.5413
chr16	87730006	87730096	protein_coding	Bach1	exon	ENSMUSG00000025612	ProperStrand	32	chr4	131865885	131865965	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.8186
chr11	98878376	98878458	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	chr11	106362673	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-1.0747
chr19	30188229	30188297	protein_coding	Gldc	exon	ENSMUSG00000024827	ProperStrand	175	chrX	71517844	71517934	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-4.4632
chr6	38542781	38542854	protein_coding	Luc7l2	intron	ENSMUSG00000029823	ProperStrand	85	chr4	131865856	131865946	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	8	-13.6161
chr10	127749949	127750032	protein_coding	Pan2	exon	ENSMUSG00000005682	ProperStrand	53	chr7	116663634	116663724	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.7266
chr11	116535914	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr4	133686408	133686508	protein_coding	Ccdc21	utr3	ENSMUSG00000037443	ProperStrand	112	1	-4.6981
chr15	99433433	99433452	protein_coding	Aqp6	exon	ENSMUSG00000043144	NonProperStrand	45	chr11	6428087	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-6.3078
chr8	86608526	86608545	protein_coding	Rfx1	intron	ENSMUSG00000031706	NonProperStrand	5	chr4	131908236	131908344	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-6.0411
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr10	80645170	80645218	protein_coding	Eef2	utr3	ENSMUSG00000034994	ProperStrand	2244	1	-0.7362
chr2	83644877	83644894	protein_coding	Itgav	utr3	ENSMUSG00000027087	NonProperStrand	33	chr1	36211949	36212000	protein_coding	Uggt1	exon	ENSMUSG00000037470	ProperStrand	67	2	-18.7995
chr3	35865168	35865235	protein_coding-noncoding	Mccc1	utr3	ENSMUSG00000027709	ProperStrand	5	chr9	15119646	15119736	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	4	-20.1757
chr9	120039544	120039624	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	chr7	106628078	106628168	snoRNA	ENSMUSG00000064966_Snord15b	.	ENSMUSG00000064966	ProperStrand	74	2	-5.0943
chr17	62956666	62956683	protein_coding	Efna5	utr3	ENSMUSG00000048915	NonProperStrand	32	chr3	123210929	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.1535
chr2	128654802	128654859	protein_coding	Tmem87b	intron	ENSMUSG00000014353	ProperStrand	10	chr2	26494708	26494781	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-10.7999
chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	chr6	115758050	115758095	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-3.9192
chr13	96374713	96374729	protein_coding	F2r	exon	ENSMUSG00000048376	NonProperStrand	88	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-6.9775
chr11	109363979	109363998	protein_coding	Arsg	intron	ENSMUSG00000020604	NonProperStrand	1	chr3	123210913	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-inf
chr1	155287310	155287354	snoRNA	ENSMUSG00000064435_SNORA4	.	ENSMUSG00000064435	ProperStrand	263	chr13	49779704	49779804	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-4.1417
chr17	31120939	31120955	protein_coding	Umodl1	exon	ENSMUSG00000054134	ProperStrand	24	chr16	23111690	23111718	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.4982
chr9	65541152	65541252	protein_coding	Zfp609	utr3	ENSMUSG00000040524	ProperStrand	87	chr16	23111770	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.3456
chr11	4820972	4820990	protein_coding	Thoc5	intron	ENSMUSG00000034274	ProperStrand	325	chr13	96100553	96100582	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	1	-4.7498
chr5	147578415	147578435	protein_coding	Usp12	intron	ENSMUSG00000029640	NonProperStrand	8	chr7	31402059	31402159	protein_coding	Cox6b1	utr3	ENSMUSG00000036751	ProperStrand	23	8	-inf
chrX	132780973	132781073	protein_coding	Wbp5	exon	ENSMUSG00000042712	ProperStrand	3	chr7	148634712	148634781	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-10.2358
chr1	74622447	74622472	protein_coding	Zfp142	exon	ENSMUSG00000026135	ProperStrand	22	chr9	120037992	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	2	-10.8347
chr1	130071459	130071501	protein_coding	R3hdm1	intron	ENSMUSG00000056211	ProperStrand	43	chr3	123210853	123210875	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-4.6204
chr7	85472461	85472477	protein_coding	Ntrk3	intron	ENSMUSG00000059146	ProperStrand	8	chr17	35087894	35087934	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-9.2836
chr19	6325568	6325584	protein_coding	Cdc42bpg	utr3	ENSMUSG00000024769	NonProperStrand	9	chr7	52234278	52234761	protein_coding	Prmt1	exon	ENSMUSG00000052429	ProperStrand	21	1	-18.4683
chr5	32657192	32657208	protein_coding	Plb1	exon	ENSMUSG00000029134	ProperStrand	50	chr14	76247711	76247737	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-4.5194
chr7	31339842	31339932	protein_coding	Hspb6	utr3	ENSMUSG00000036854	ProperStrand	4	chr4	131866176	131866256	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-9.1999
chr9	98480575	98480761	protein_coding	Copb2	exon	ENSMUSG00000032458	ProperStrand	33	chr14	76372302	76372364	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	4	-23.1591
chr6	85418319	85418342	protein_coding	Cct7	utr3	ENSMUSG00000030007	ProperStrand	173	chr10	110419171	110423008	protein_coding	Zdhhc17	exon	ENSMUSG00000035798	ProperStrand	11	1	-14.6550
chr12	111929495	111932783	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	8	-4.1169
chr7	26181911	26202421	protein_coding	Lipe	intron	ENSMUSG00000003123	NonProperStrand	63	chr10	79756711	79756779	protein_coding	Rps15	exon	ENSMUSG00000063457	ProperStrand	119	2	-18.6653
chr13	114113333	114113350	protein_coding	BC067074	exon	ENSMUSG00000021763	NonProperStrand	62	chr5	108336395	108336495	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-4.8177
chr15	82072052	82072152	protein_coding	Cenpm	intron	ENSMUSG00000068101	ProperStrand	6	chr16	23110940	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.7876
chr1	162965531	162965554	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr12	16946823	16946895	snoRNA	ENSMUSG00000064620_SNORA32	.	ENSMUSG00000064620	ProperStrand	165	2	-2.9390
chr14	77424372	77424388	protein_coding	9030625A04Rik	utr3	ENSMUSG00000044350	NonProperStrand	152	chr17	35089184	35089256	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-3.7113
chr1	71341491	71341508	protein_coding	Abca12	exon	ENSMUSG00000050296	NonProperStrand	143	chr7	117189864	117189920	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-4.5222
chr4	137352026	137352116	protein_coding-noncoding	Alpl	utr3	ENSMUSG00000028766	ProperStrand	2	chr16	43886793	43886873	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	1	-15.5216
chr16	87419193	87419247	snoRNA	ENSMUSG00000065647_SNORA2	.	ENSMUSG00000065647	ProperStrand	123	chr2	144087332	144087375	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-5.1394
chr16	23111375	23111505	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	chr3	153574574	153574654	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	9	-2.1309
chr1	113757902	113757918	protein_coding	Dsel	exon	ENSMUSG00000038702	ProperStrand	2	chr7	117189963	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-10.6222
chr16	32811969	32811986	LTR	MLT1L	MaLR	chr16MLT1L32811964	ProperStrand	1	chr2	32818883	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-inf
chr3	156224612	156224628	lincRNA	4930570G19Rik	exon	ENSMUSG00000085084	ProperStrand	326	chr17	35089182	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-2.3590
chr2	29842300	29842378	protein_coding	Spna2	exon	ENSMUSG00000057738	ProperStrand	222	chr1	162965548	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.1640
chr5	42136455	42136473	Low_complexity	GA-rich	Low_complexity	chr5GA-rich42136449	NonProperStrand	106	chr2	61892317	61892334	protein_coding	Slc4a10	intron	ENSMUSG00000026904	ProperStrand	40	1	-12.9889
chr11	98187998	98188014	protein_coding	Neurod2	utr3	ENSMUSG00000038255	NonProperStrand	7	chr5	151755615	151755631	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-12.1558
chr17	34342157	34342247	protein_coding	Tap2	utr5	ENSMUSG00000024339	ProperStrand	6	chr17	35299559	35299639	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-9.4663
chr6	91705698	91705787	protein_coding	Slc6a6	utr3	ENSMUSG00000030096	ProperStrand	206	chr11	69481332	69481391	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	4	-5.2675
chr11	33060356	33061550	protein_coding	Npm1	exon	ENSMUSG00000057113	ProperStrand	352	chr5	121655031	121655132	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-1.8160
chr9	65044377	65044425	snRNA	ENSMUSG00000075763_U5	.	ENSMUSG00000075763	ProperStrand	216	chr4	131908236	131908318	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	9	-6.0379
chr7	20288204	20288267	protein_coding	Tomm40	exon	ENSMUSG00000002984	ProperStrand	57	chr9	15119289	15119379	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-5.2084
chrX	148348795	148348818	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	chr13	51745905	51746003	protein_coding	Cks2	utr3	ENSMUSG00000062248	ProperStrand	26	6	-20.2764
chr7	140916114	140916204	protein_coding	Dhx32	exon	ENSMUSG00000030986	ProperStrand	100	chr1	88247742	88247802	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-4.1193
chr12	8755570	8755640	protein_coding	Pum2	exon	ENSMUSG00000020594	ProperStrand	39	chr10	23505152	23505235	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-7.3625
chr3	35725890	35725907	protein_coding	Atp11b	exon	ENSMUSG00000037400	NonProperStrand	18	chr1	187066844	187066916	snoRNA	ENSMUSG00000077571_Snora36b	.	ENSMUSG00000077571	ProperStrand	244	1	-12.9447
chr11	115652321	115652338	protein_coding	2310067B10Rik	exon	ENSMUSG00000020747	ProperStrand	74	chr2	158182155	158182279	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	5	-18.2433
chr1	83179871	83179890	protein_coding	Wdr69	exon	ENSMUSG00000053161	ProperStrand	4	chr2	130103751	130103808	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-14.1414
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr1	59539701	59539717	protein_coding	Fzd7	utr5	ENSMUSG00000041075	ProperStrand	373	1	-4.3977
chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	chr18	75162403	75162432	protein_coding	Rpl17	exon	ENSMUSG00000062328	ProperStrand	90	1	-8.4624
chr3	90303782	90303827	protein_coding	2500003M10Rik	utr3	ENSMUSG00000001017	ProperStrand	28	chr4	122968619	122968719	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-7.8023
chr5	102265157	102265214	protein_coding	Wdfy3	utr3	ENSMUSG00000043940	ProperStrand	45	chr1	162967136	162967178	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	2	-14.6715
chrX	84483704	84483742	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr9	110544350	110544366	protein_coding	Nbeal2	exon	ENSMUSG00000056724	ProperStrand	161	1	-6.2902
chr12	88488443	88496424	protein_coding	Pomt2	exon	ENSMUSG00000034126	NonProperStrand	331	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-1.4324
chr6	50148712	50148754	protein_coding	Dfna5	intron	ENSMUSG00000029821	NonProperStrand	8	chr4	53873614	53873646	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	1	-13.1813
chr14	9002921	9003805	protein_coding	Pdhb	exon	ENSMUSG00000021748	ProperStrand	28	chr18	35102298	35102336	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-8.1148
chr6	95079427	95079443	protein_coding	Kbtbd8	utr3	ENSMUSG00000030031	ProperStrand	26	chr17	24665467	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-6.5885
chr11	33056026	33059966	protein_coding	Npm1	exon	ENSMUSG00000057113	ProperStrand	352	chr8	129468760	129468850	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	3	-4.0695
chr8	68568554	68568575	protein_coding	March1	intron	ENSMUSG00000036469	NonProperStrand	14	chr2	32818866	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	2	-13.4508
chr2	22444513	22444575	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	chr16	23109048	23109090	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-2.0922
chr3	144375678	144382947	protein_coding	Sh3glb1	exon	ENSMUSG00000037062	ProperStrand	9	chr2	158185589	158185653	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	2	-16.4409
chr6	71502395	71502411	protein_coding	Chmp3	exon	ENSMUSG00000053119	ProperStrand	16	chr7	118219574	118219621	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-6.7705
chr9	78023109	78023171	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr10	127018867	127020456	protein_coding	Lrp1	exon	ENSMUSG00000040249	ProperStrand	151	1	-4.0991
chr16	90259082	90260461	protein_coding	Scaf4	exon	ENSMUSG00000022983	ProperStrand	44	chr7	29136554	29136574	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.9030
chr2	181286972	181286990	protein_coding	Dnajc5	utr3	ENSMUSG00000000826	ProperStrand	14	chr4	131908236	131908336	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.9265
chr14	87907943	87907960	protein_coding	Tdrd3	intron	ENSMUSG00000022019	ProperStrand	19	chr10	23505151	23505218	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.1073
chr7	29605569	29605670	protein_coding	Hnrnpl	exon	ENSMUSG00000015165	ProperStrand	150	chr2	26768405	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	5	-15.8642
chr17	66468411	66468427	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	chr2	130101242	130101305	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-3.2887
chr9	62768001	62768101	protein_coding	Pias1	intron	ENSMUSG00000032405	ProperStrand	13	chr10	127521237	127521269	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	1	-11.9072
chr6	124710301	124710317	protein_coding	Eno2	utr3	ENSMUSG00000004267	ProperStrand	3	chr11	69483215	69483268	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-8.5256
chr5	122621058	122621158	protein_coding	Ppp1cc	intron	ENSMUSG00000004455	ProperStrand	46	chr8	32260335	32260374	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-5.1438
chr3	34664272	34664361	LTR	MTE2b	MaLR	chr3MTE2b34664208	NonProperStrand	1	chr1	9932550	9932598	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-inf
chr11	86314368	86314404	protein_coding	Rps6kb1	utr3	ENSMUSG00000020516	ProperStrand	16	chr8	73419649	73419754	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-5.6620
chr15	81783158	81783229	protein_coding	Pmm1	exon	ENSMUSG00000022474	ProperStrand	24	chr7	29136526	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	5	-16.8544
chr15	81872486	81872556	protein_coding	Nhp2l1	utr3	ENSMUSG00000063480	ProperStrand	40	chr13	21292132	21292179	tRNA	tRNA65-LeuCAA	.	868831	ProperStrand	57	1	-14.2316
chr2	179322378	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr16	18283302	18283319	protein_coding	Dgcr8	exon	ENSMUSG00000022718	ProperStrand	67	1	-10.9896
chr12	110782459	110782516	lincRNA	Meg3	exon	ENSMUSG00000021268	ProperStrand	61	chr11	100414998	100415014	protein_coding	Ttc25	exon	ENSMUSG00000006784	NonProperStrand	119	1	-11.9049
chr9	99132388	99132478	SINE	B2_Mm2	B2	chr9B2_Mm299132412	ProperStrand	1	chr9	99132649	99132739	SINE	ID_B1	B4	chr9ID_B199132671	ProperStrand	1	1	-inf
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr15	5068407	5068480	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-3.3030
chr12	112865346	112865385	protein_coding	Mark3	exon	ENSMUSG00000007411	ProperStrand	37	chr11	68214007	68214057	protein_coding	Ntn1	utr5	ENSMUSG00000020902	ProperStrand	44	1	-14.9190
chr4	131825992	131826095	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	chr7	116664811	116664901	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	6	-2.6592
chr11	59251949	59263438	protein_coding	Snap47	utr5	ENSMUSG00000009894	ProperStrand	19	chr7	29136526	29136616	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.4734
chr11	80285874	80285907	protein_coding	Psmd11	utr3	ENSMUSG00000017428	ProperStrand	34	chr5	108336363	108336412	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-5.9928
chr2	158185530	158185567	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr4	116826699	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-0.8168
chrX	84483701	84483748	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr7	117189943	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	4	-1.1460
chrX	7408626	7408729	protein_coding	Kcnd1	exon	ENSMUSG00000009731	ProperStrand	19	chr11	62416574	62416627	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-7.4528
chr11	98878344	98878368	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	chr5	130295414	130295552	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	4	-1.2000
chr6	143007910	143007930	protein_coding	5730419I09Rik	intron	ENSMUSG00000030279	ProperStrand	81	chr17	39985543	39985656	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-5.3450
chr12	102942689	102942706	protein_coding	Tc2n	intron	ENSMUSG00000021187	ProperStrand	32	chr10	75503256	75503284	protein_coding	Zfp280b	utr3	ENSMUSG00000049764	ProperStrand	25	1	-16.3474
chr16	44160189	44160289	protein_coding	Naa50	utr3	ENSMUSG00000022698	ProperStrand	56	chr4	131866233	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-3.7936
chr13	59699448	59701131	protein_coding	Naa35	exon	ENSMUSG00000021555	ProperStrand	20	chr8	32260335	32260375	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-6.7965
chr1	164645549	164645584	protein_coding	Prrc2c	exon	ENSMUSG00000040225	ProperStrand	413	chr9	110544350	110544366	protein_coding	Nbeal2	exon	ENSMUSG00000056724	ProperStrand	161	1	-7.4793
chr2	26447690	26447707	protein_coding	Egfl7	exon	ENSMUSG00000026921	NonProperStrand	7	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	1	-11.4366
chr1	95308959	95334888	protein_coding	Hdlbp	exon	ENSMUSG00000034088	ProperStrand	97	chr16	23110912	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-1.5659
chr4	132619922	132619940	protein_coding	Ahdc1	exon	ENSMUSG00000037692	NonProperStrand	5	chrX	132279054	132279086	protein_coding	Gprasp1	utr5	ENSMUSG00000043384	ProperStrand	57	1	-17.9753
chr10	65682910	65682930	LINE	L1_Mus3	L1	chr10L1_Mus365682099	ProperStrand	2	chr17	32293707	32293725	protein_coding	Notch3	intron	ENSMUSG00000038146	ProperStrand	181	1	-19.7332
chr16	90074201	90074282	protein_coding	Tiam1	intron	ENSMUSG00000002489	ProperStrand	80	chr10	89254221	89257297	protein_coding	Uhrf1bp1l	exon	ENSMUSG00000019951	ProperStrand	28	1	-14.2760
chr10	76542008	76543454	protein_coding	Col18a1	exon	ENSMUSG00000001435	ProperStrand	287	chr4	127003634	127003690	protein_coding	Gjb3	exon	ENSMUSG00000042367	NonProperStrand	9	5	-20.2769
chr8	74008400	74008417	protein_coding	Ano8	exon	ENSMUSG00000034863	NonProperStrand	171	chr11	97642952	97643080	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	4	-4.3477
chr10	35961359	35961449	LINE	L1Md_F	L1	chr10L1Md_F35959309	NonProperStrand	1	chr10	35961470	35961550	LINE	L1_Mm	L1	chr10L1_Mm35961468	ProperStrand	1	1	-inf
chr6	127059529	127059545	protein_coding	9630033F20Rik	utr5	ENSMUSG00000038028	ProperStrand	10	chr13	46059234	46059329	protein_coding	Atxn1	intron	ENSMUSG00000046876	NonProperStrand	8	1	-19.7808
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr17	35087896	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-1.1371
chr10	82359955	82360009	protein_coding	Txnrd1	utr3	ENSMUSG00000020250	ProperStrand	47	chr13	103895241	103895257	protein_coding	Mast4	intron	ENSMUSG00000034751	ProperStrand	150	1	-11.9678
chr10	67599315	67599350	protein_coding	Arid5b	utr5	ENSMUSG00000019947	ProperStrand	43	chr3	68889272	68889349	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	5	-16.1600
chr12	68602873	68602899	LINE	Lx3C	L1	chr12Lx3C68602549	ProperStrand	1	chr18	35716697	35716761	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-inf
chr11	98308560	98312092	protein_coding	Grb7	utr5	ENSMUSG00000019312	NonProperStrand	3	chr9	120038562	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-9.2011
chr4	118955426	118955472	protein_coding	Ybx1	exon	ENSMUSG00000028639	ProperStrand	171	chr16	23111689	23111733	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-1.1765
chr19	45850621	45850651	protein_coding	Mgea5	exon	ENSMUSG00000025220	ProperStrand	53	chr1	165993210	165993226	protein_coding	Sell	exon	ENSMUSG00000026581	ProperStrand	12	1	-16.8520
chr15	34370545	34370603	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	chr4	116828390	116828453	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	4	-1.6069
chr8	24367267	24367497	protein_coding	Golga7	utr5	ENSMUSG00000015341	ProperStrand	36	chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	1	-11.3068
chr11	70415171	70415220	protein_coding	Mink1	exon	ENSMUSG00000020827	ProperStrand	113	chr4	44162085	44162103	protein_coding	Rnf38	exon	ENSMUSG00000035696	ProperStrand	66	1	-11.8510
chr12	110031944	110031960	protein_coding	Yy1	exon	ENSMUSG00000021264	ProperStrand	31	chr8	13416897	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-7.7724
chr4	141024418	141024458	protein_coding	Spen	utr3	ENSMUSG00000040761	ProperStrand	161	chr17	35089184	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	4	-11.9071
chr11	100414998	100415014	protein_coding	Ttc25	exon	ENSMUSG00000006784	NonProperStrand	119	chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-5.1138
chr2	120838113	120838472	protein_coding	Ccndbp1	exon	ENSMUSG00000023572	ProperStrand	3	chr7	116664811	116664891	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-8.6415
chr6	124829638	124829654	protein_coding	Cd4	exon	ENSMUSG00000023274	ProperStrand	9	chr1	162967734	162967806	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	1	-14.1356
chr9	110089366	110090420	protein_coding	Smarcc1	exon	ENSMUSG00000032481	ProperStrand	108	chr8	73419657	73419729	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.1174
chr13	63401068	63401086	protein_coding	2010111I01Rik	intron	ENSMUSG00000021458	NonProperStrand	8	chr10	127895517	127895568	tRNA	tRNA688-SerCGA	.	667982	ProperStrand	71	1	-17.0237
chr3	108228259	108228275	protein_coding	Sars	utr3	ENSMUSG00000068739	NonProperStrand	200	chr11	62416597	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-2.9168
chr1	55137188	55137932	protein_coding	Hspd1	exon	ENSMUSG00000025980	ProperStrand	140	chr1	71653289	71653374	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	3	-14.0935
chr1	88426697	88426750	protein_coding	Ptma	utr3	ENSMUSG00000026238	ProperStrand	385	chr18	80403573	80403589	protein_coding	Txnl4a	utr5	ENSMUSG00000057130	ProperStrand	44	1	-10.2143
chr2	164257636	164257652	protein_coding	Sdc4	intron	ENSMUSG00000017009	ProperStrand	177	chr2	91436228	91436261	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	2	-8.7866
chr16	57391758	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chrX	148339901	148340828	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	1	-3.6752
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr10	11147731	11147749	protein_coding	Epm2a	intron	ENSMUSG00000055493	NonProperStrand	8	4	-19.0170
chr1	71113741	71113821	protein_coding	Bard1	intron	ENSMUSG00000026196	ProperStrand	44	chr11	69483137	69483227	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-7.6794
chr11	58809803	58810353	protein_coding	Obscn	exon	ENSMUSG00000061462	ProperStrand	81	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-5.2561
chr4	32847656	32847719	protein_coding	Mdn1	exon	ENSMUSG00000058006	ProperStrand	184	chr4	116828379	116828451	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-6.1595
chr8	12757419	12757437	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr2	130101244	130101310	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-2.1916
chr7	26558394	26558484	protein_coding	Axl	exon	ENSMUSG00000002602	NonProperStrand	47	chr2	52902589	52902669	protein_coding	Fmnl2	intron	ENSMUSG00000036053	ProperStrand	35	1	-14.9096
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr11	69482450	69482497	snoRNA	ENSMUSG00000089542_snoU6-77	.	ENSMUSG00000089542	ProperStrand	138	1	-5.3893
chr5	16585465	16585545	LTR	RLTR25A	ERVK	chr5RLTR25A16585170	NonProperStrand	1	chr5	16585590	16585680	LTR	RLTR47_MM	ERV1	chr5RLTR47_MM16585576	NonProperStrand	1	1	-inf
chr4	131865380	131865507	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	chr15	79908928	79909019	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	15	-2.6125
chr19	9041668	9042717	protein_coding	Eef1g	utr5	ENSMUSG00000071644	ProperStrand	410	chr2	26493435	26493472	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	3	-2.5142
chr11	83254019	83254035	protein_coding	1700020L24Rik	exon	ENSMUSG00000035085	NonProperStrand	88	chr7	148634738	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-3.2780
chr10	127545978	127546014	protein_coding	Baz2a	exon	ENSMUSG00000040054	ProperStrand	274	chr10	62301661	62301759	protein_coding	Tet1	exon	ENSMUSG00000047146	ProperStrand	286	1	-7.1534
chr13	23844242	23844297	protein_coding	Hist1h3b	utr5	ENSMUSG00000069267	ProperStrand	25	chr9	15119631	15119711	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-10.3361
chr6	54379743	54379760	lincRNA	9130019P16Rik	exon	ENSMUSG00000073067	ProperStrand	255	chr4	116827117	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	2	-7.0521
chr6	82678797	82678843	protein_coding	Hk2	exon	ENSMUSG00000000628	ProperStrand	88	chr6	115737251	115737267	protein_coding	Cand2	exon	ENSMUSG00000030319	ProperStrand	40	1	-13.3630
chr4	117810204	117810262	protein_coding	Kdm4a	utr3	ENSMUSG00000033326	ProperStrand	81	chr19	8963111	8963183	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	4	-7.0378
chr9	78023113	78023193	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr11	51932803	51934521	protein_coding	Ppp2ca	exon	ENSMUSG00000020349	ProperStrand	22	1	-7.8816
chr17	12890307	12890332	protein_coding	Igf2r	exon	ENSMUSG00000023830	ProperStrand	151	chr4	116230385	116230401	protein_coding	Gpbp1l1	utr5	ENSMUSG00000034042	NonProperStrand	106	1	-10.3179
chr16	23110574	23111578	protein_coding	Eif4a2	exon	ENSMUSG00000022884	ProperStrand	356	chr16	23110460	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	9	-7.1726
chr3	157657620	157657666	protein_coding	Ankrd13c	exon	ENSMUSG00000039988	ProperStrand	14	chr6	8728377	8728394	protein_coding	Ica1	utr5	ENSMUSG00000062995	NonProperStrand	6	1	-20.8732
chrX	132673816	132673833	protein_coding	Bex4	intron	ENSMUSG00000047844	NonProperStrand	70	chr2	174156209	174156226	protein_coding	AL593857.1	intron	ENSMUSG00000090625	ProperStrand	13	1	-16.1554
chr11	115885089	115885211	protein_coding	H3f3b	exon	ENSMUSG00000016559	ProperStrand	76	chr6	113118507	113118525	protein_coding	Lhfpl4	utr3	ENSMUSG00000042873	ProperStrand	47	1	-13.3326
chr12	3968611	3968627	protein_coding	Efr3b	exon	ENSMUSG00000020658	ProperStrand	142	chr11	119559950	119560013	protein_coding	Rptor	intron	ENSMUSG00000025583	ProperStrand	76	1	-11.1088
chr3	30691926	30691942	protein_coding	Sec62	utr5	ENSMUSG00000027706	ProperStrand	12	chr16	23110828	23110894	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.4686
chr11	55296208	55296276	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	chrX	143918836	143918922	snoRNA	ENSMUSG00000084421_SNORA35	.	ENSMUSG00000084421	ProperStrand	293	1	-3.1637
chr17	56236255	56236344	protein_coding	Hdgfrp2	exon	ENSMUSG00000002833	ProperStrand	36	chr16	23111796	23111834	protein_coding	Eif4a2	intron	ENSMUSG00000022884	ProperStrand	356	1	-10.7762
chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	chr17	71990942	71990981	snoRNA	ENSMUSG00000092713_CT010429.1	.	ENSMUSG00000092713	ProperStrand	182	1	-0.7114
chr19	4803769	4803869	protein_coding	Rbm14	exon	ENSMUSG00000006456	ProperStrand	84	chr19	8798740	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	10	-23.5517
chrX	34414520	34414725	protein_coding	Ube2a	exon	ENSMUSG00000016308	ProperStrand	1	chr9	117080240	117080256	protein_coding	Rbms3	intron	ENSMUSG00000039607	NonProperStrand	54	1	-inf
chr18	80637717	80637776	protein_coding	Ctdp1	intron	ENSMUSG00000033323	ProperStrand	69	chr4	131908359	131908410	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-3.7598
chr13	46795030	46796375	protein_coding	Nup153	exon	ENSMUSG00000021374	ProperStrand	69	chr7	116663634	116663714	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.2753
chr7	109352441	109352531	protein_coding	Nup98	intron	ENSMUSG00000063550	ProperStrand	100	chr7	116664794	116664874	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.7154
chr13	39052301	39052388	protein_coding	Slc35b3	utr5	ENSMUSG00000021432	ProperStrand	27	chr6	71832629	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	2	-11.5952
chr6	29371032	29371122	protein_coding	Ccdc136	intron	ENSMUSG00000029769	ProperStrand	19	chr16	23110914	23110994	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7016
chr13	93446548	93446565	protein_coding	Serinc5	intron	ENSMUSG00000021703	ProperStrand	57	chr9	50816824	50816841	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	1	-11.9112
chr13	72100991	72101008	protein_coding	Irx1	utr5	ENSMUSG00000060969	NonProperStrand	15	chr2	26494775	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.7664
chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	chr2	119773686	119773723	protein_coding	Mga	exon	ENSMUSG00000033943	ProperStrand	180	1	-7.0843
chr5	121656751	121658436	protein_coding	Rpl6	exon	ENSMUSG00000029614	ProperStrand	332	chr19	8798483	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-3.7579
chr14	76106098	76106140	protein_coding	Cog3	intron	ENSMUSG00000034893	ProperStrand	37	chr18	35714166	35714256	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.3503
chr6	88245117	88245217	protein_coding	Eefsec	intron	ENSMUSG00000033216	ProperStrand	23	chr3	123210854	123210917	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.7662
chr5	9463020	9479197	protein_coding	9330182L06Rik	exon	ENSMUSG00000056004	ProperStrand	2	chr19	8963062	8963081	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-9.4105
chr15	73581640	73581730	protein_coding	Ptp4a3	utr5	ENSMUSG00000059895	ProperStrand	45	chr5	108334195	108334275	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	6	-21.9831
chr18	32405206	32405222	protein_coding	Ercc3	exon	ENSMUSG00000024382	ProperStrand	280	chr1	162965980	162965998	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-1.0950
chr5	122941755	122950777	protein_coding	Atp2a2	exon	ENSMUSG00000029467	ProperStrand	166	chr11	69483136	69483191	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-0.9352
chr6	115757992	115758119	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr6	71832550	71832673	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	6	-1.7203
chr1	155287316	155287355	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	chr11	6428060	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	10	-8.8092
chr7	110114018	110114034	protein_coding	Olfr576	exon	ENSMUSG00000073962	NonProperStrand	79	chr14	76247753	76247770	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-3.6568
mmu-miR-6240	4	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr6	113118507	113118525	protein_coding	Lhfpl4	utr3	ENSMUSG00000042873	ProperStrand	47	1	-6.3857
chr8	14328347	14328365	protein_coding	Dlgap2	intron	ENSMUSG00000047495	NonProperStrand	23	chr11	97642952	97643047	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	4	-13.8080
chr15	98570333	98570407	protein_coding	Arf3	utr3	ENSMUSG00000051853	ProperStrand	41	chr14	33005039	33005139	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-4.7199
chr2	78830020	78830110	LINE	L1_Mus1	L1	chr2L1_Mus178829860	ProperStrand	1	chr3	35991337	35991417	protein_coding	Acad9	utr3	ENSMUSG00000027710	ProperStrand	11	1	-inf
chr17	57163350	57163467	protein_coding	Khsrp	exon	ENSMUSG00000007670	ProperStrand	353	chr13	49779750	49779805	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-3.5946
chr2	26218397	26218487	protein_coding	Snapc4	utr3	ENSMUSG00000036281	ProperStrand	19	chr7	116663636	116663716	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.6387
chr11	119136228	119136244	protein_coding	Gaa	exon	ENSMUSG00000025579	NonProperStrand	201	chr4	118809108	118809168	protein_coding	Slc2a1	utr3	ENSMUSG00000028645	ProperStrand	361	1	-7.3058
chr18	62150131	62150148	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	NonProperStrand	3	chr1	162965531	162965554	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-9.4650
chr5	151755614	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr15	95803551	95803567	protein_coding	Ano6	utr3	ENSMUSG00000064210	NonProperStrand	11	1	-11.1945
chr11	40563138	40563156	protein_coding	Ccng1	utr3	ENSMUSG00000020326	ProperStrand	30	chr8	96697306	96697356	protein_coding	Mt2	utr3	ENSMUSG00000031762	ProperStrand	71	1	-14.3798
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr15	77356785	77356801	protein_coding	Apol7c	exon	ENSMUSG00000044309	ProperStrand	197	1	-5.4499
chr8	125003091	125003189	protein_coding	Ctu2	exon	ENSMUSG00000049482	ProperStrand	21	chr16	23111704	23111827	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.7491
chr18	34791712	34791980	protein_coding	Kif20a	exon	ENSMUSG00000003779	ProperStrand	50	chr6	115758029	115758119	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	4	-17.4557
chr6	91838220	91838237	protein_coding	C130022K22Rik	exon	ENSMUSG00000034083	NonProperStrand	1	chr6	71832629	71832687	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-inf
chr11	102855971	102856007	protein_coding	Dcakd	utr3	ENSMUSG00000020935	ProperStrand	61	chr15	98350184	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	2	-7.8352
chrX	45788962	45788979	protein_coding	Elf4	intron	ENSMUSG00000031103	NonProperStrand	49	chr9	15119648	15119726	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.9863
chr5	145642667	145643408	protein_coding	Smurf1	exon	ENSMUSG00000038780	ProperStrand	45	chrX	11635848	11635865	protein_coding	Bcor	exon	ENSMUSG00000040363	NonProperStrand	293	1	-10.7144
chr19	21352170	21354136	protein_coding	Zfand5	exon	ENSMUSG00000024750	ProperStrand	12	chr3	95980393	95980410	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	4	-19.9402
chr11	69170097	69170113	protein_coding	Chd3	exon	ENSMUSG00000018474	NonProperStrand	8	chr7	29136555	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-10.2840
chr6	51412104	51416972	protein_coding	Hnrnpa2b1	exon	ENSMUSG00000004980	ProperStrand	166	chr16	23110829	23110993	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	19	-10.9183
mmu-miR-6238	2	19	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr2	26493407	26493497	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-1.4074
chr8	103289497	103289516	Simple_repeat	(CA)n	Simple_repeat	chr8(CA)n103289418	ProperStrand	10	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-8.8233
chr13	97949144	97949162	protein_coding	Gfm2	utr3	ENSMUSG00000021666	ProperStrand	26	chr5	118520520	118527593	protein_coding	Fbxw8	exon	ENSMUSG00000032867	ProperStrand	61	1	-14.9701
chr4	122721737	122721771	protein_coding	Trit1	exon	ENSMUSG00000028653	ProperStrand	9	chr16	23111770	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.4225
chr12	77162805	77165098	protein_coding	Syne2	exon	ENSMUSG00000063450	ProperStrand	63	chr5	130300528	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-4.2951
chr11	98544169	98544185	protein_coding	Psmd3	exon	ENSMUSG00000017221	ProperStrand	51	chr5	121655016	121655097	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-6.8106
chr3	88691117	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr16	23110454	23110584	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	16	-3.4716
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr9	108478264	108478281	protein_coding	Wdr6	exon	ENSMUSG00000066357	ProperStrand	30	1	-10.2374
chr3	108357255	108357317	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	chr13	23399497	23399553	tRNA	tRNA98-ValCAC	.	54632	ProperStrand	17	1	-7.0327
chr11	68886996	68887059	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	chr9	64024535	64024567	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	2	-0.9289
chr5	109135781	109135896	protein_coding	Fgfrl1	utr3	ENSMUSG00000008090	ProperStrand	111	chr18	73693107	73693135	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-4.3379
chr8	74428111	74428201	LTR	RLTR27	ERVK	chr8RLTR2774428053	ProperStrand	1	chr8	74427874	74427964	LTR	RMER17A	ERVK	chr8RMER17A74427718	NonProperStrand	1	1	-inf
chr13	97419882	97419966	protein_coding	Hmgcr	utr3	ENSMUSG00000021670	ProperStrand	56	chr19	8800114	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-7.7458
chr5	75559567	75559587	protein_coding	Pdgfra	exon	ENSMUSG00000029231	ProperStrand	11	chr16	23111394	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-7.1274
chr9	108958958	108958996	protein_coding	Shisa5	exon	ENSMUSG00000025647	ProperStrand	43	chr7	117166782	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	3	-12.7646
chr17	34089013	34089039	protein_coding	Rps18	exon	ENSMUSG00000008668	ProperStrand	111	chr5	111162817	111162890	protein_coding	Ep400	exon	ENSMUSG00000029505	ProperStrand	176	2	-15.6375
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr17	39985196	39985295	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-1.4556
chr11	78321836	78322157	protein_coding	Tmem199	exon	ENSMUSG00000051232	ProperStrand	6	chr1	162965562	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-7.8657
chr2	23002131	23011344	protein_coding	Mastl	intron	ENSMUSG00000026779	ProperStrand	60	chr16	23110827	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-4.4819
chr16	32678748	32678838	protein_coding	Tnk2	intron	ENSMUSG00000022791	ProperStrand	86	chr8	73419657	73419747	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.4979
chr19	10703979	10704079	protein_coding	Ddb1	utr3	ENSMUSG00000024740	ProperStrand	304	chr8	129468745	129468816	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-1.5846
chr5	77736723	77738014	protein_coding	Noa1	exon	ENSMUSG00000036285	ProperStrand	147	chr1	155287331	155287355	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	1	-7.1926
chr3	137985976	137985992	protein_coding	Adh6a	exon	ENSMUSG00000053054	NonProperStrand	2	chr5	108336412	108336495	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-inf
chr11	118349195	118349214	protein_coding	Engase	utr3	ENSMUSG00000033857	ProperStrand	12	chr11	69483190	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	4	-17.3089
chr5	76050768	76050786	protein_coding	Kit	utr3	ENSMUSG00000005672	NonProperStrand	3	chr16	23110455	23110517	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-8.5395
chr7	6583142	6583189	LTR	RodERV21-int	ERV1	chr7RodERV21-int6583023	NonProperStrand	1	chr17	24857738	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-inf
chr11	7216595	7216685	SINE	PB1	Alu	chr11PB17216583	ProperStrand	1	chr11	65507979	65508059	protein_coding	Map2k4	intron	ENSMUSG00000033352	ProperStrand	10	1	-inf
chr7	116663634	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	chr12	110887862	110887894	snoRNA	ENSMUSG00000084549_SNORD113	.	ENSMUSG00000084549	ProperStrand	196	2	-1.6043
chr8	109177481	109177674	protein_coding	Cdh1	exon	ENSMUSG00000000303	ProperStrand	283	chr2	26493365	26493455	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-1.1801
chr5	136707644	136707662	protein_coding	Sh2b2	exon	ENSMUSG00000005057	NonProperStrand	101	chr4	134926614	134927796	protein_coding	A330049M08Rik	exon	ENSMUSG00000043924	ProperStrand	130	2	-16.7796
chr5	121655100	121655150	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	NonProperStrand	38	chr18	74938045	74938111	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	NonProperStrand	6	2	-19.2522
chr11	97038579	97038618	protein_coding	Kpnb1	exon	ENSMUSG00000001440	ProperStrand	197	chr9	15119303	15119393	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-2.8908
chr4	43505654	43505797	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr5	36471909	36504671	protein_coding	Sorcs2	intron	ENSMUSG00000029093	NonProperStrand	15	2	-9.4277
chr19	30213825	30213854	protein_coding	Gldc	exon	ENSMUSG00000024827	ProperStrand	175	chr19	27837820	27837836	protein_coding	Rfx3	utr3	ENSMUSG00000040929	ProperStrand	92	1	-10.3068
chr2	158205268	158205407	snoRNA	ENSMUSG00000064585_SNORA71	.	ENSMUSG00000064585	ProperStrand	418	chr16	23110828	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	35	-10.3805
chr18	35102297	35102333	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	chr6	124665480	124665518	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	1	-0.9709
chr16	37777391	37777408	protein_coding	Fstl1	exon	ENSMUSG00000022816	ProperStrand	179	chr9	15119992	15120039	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-5.1062
chr11	85651938	85651954	protein_coding	Tbx2	exon	ENSMUSG00000000093	NonProperStrand	14	chr1	185857228	185857244	protein_coding	1700056E22Rik	exon	ENSMUSG00000044854	ProperStrand	173	1	-14.1556
chr6	83926866	83926904	protein_coding	Zfml	exon	ENSMUSG00000030016	ProperStrand	45	chr17	35299507	35299595	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-5.3357
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr12	17552966	17553090	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	2	-1.2252
chr1	93743979	93743995	protein_coding	Twist2	utr3	ENSMUSG00000007805	ProperStrand	21	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-13.8144
chr8	97897353	97897432	protein_coding	Mmp15	utr3	ENSMUSG00000031790	ProperStrand	13	chr6	148725876	148725899	protein_coding	Ipo8	exon	ENSMUSG00000040029	ProperStrand	22	2	-23.1707
chr5	52543208	52545314	protein_coding	Dhx15	exon	ENSMUSG00000029169	ProperStrand	53	chr15	79910168	79910220	protein_coding	Rpl3	exon	ENSMUSG00000060036	ProperStrand	8342	2	-6.4588
chr19	5798613	5798640	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr6	54823060	54823150	protein_coding	Znrf2	intron	ENSMUSG00000058446	ProperStrand	13	2	-16.8532
chr5	100855904	100855940	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr2	179915599	179915679	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	1	-3.1877
chr6	144946031	144946047	protein_coding	Bcat1	utr3	ENSMUSG00000030268	ProperStrand	49	chr4	131908724	131908824	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.5109
chr9	15119631	15119767	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	chr12	88778624	88778745	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	13	-0.7437
chr4	115920327	115920344	protein_coding	Pik3r3	intron	ENSMUSG00000028698	ProperStrand	3	chr7	29136525	29136626	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-8.4253
chr8	48913736	48913783	protein_coding	Wwc2	utr3	ENSMUSG00000031563	ProperStrand	37	chr4	131866154	131866244	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-4.5804
chr3	104627946	104628017	protein_coding	Capza1	exon	ENSMUSG00000070372	ProperStrand	42	chr2	26768371	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-6.3045
chr7	3581337	3581353	protein_coding	Tfpt	utr5	ENSMUSG00000006335	ProperStrand	19	chr16	23111758	23111811	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.9396
chr4	94539735	94539769	protein_coding	Tek	exon	ENSMUSG00000006386	ProperStrand	10	chr16	23110871	23110961	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.7978
chr1	181027187	181027205	protein_coding	Smyd3	intron	ENSMUSG00000055067	ProperStrand	231	chr4	56910571	56910630	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-3.5271
chr7	28146782	28146798	protein_coding	Spnb4	exon	ENSMUSG00000011751	NonProperStrand	84	chr2	144097020	144097037	protein_coding	8430406I07Rik	utr5	ENSMUSG00000027424	ProperStrand	43	1	-13.3121
chr6	72283115	72286256	protein_coding	Usp39	exon	ENSMUSG00000056305	ProperStrand	16	chr19	8799607	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-9.4340
chr14	51427118	51427228	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chrX	84483702	84483732	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-2.4253
chr7	107463024	107463041	protein_coding	P4ha3	intron	ENSMUSG00000051048	NonProperStrand	29	chr7	117190015	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.7044
chr19	44217446	44217536	protein_coding	Bloc1s2	intron	ENSMUSG00000057506	ProperStrand	9	chr4	131908815	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.5343
chr7	5062341	5062360	protein_coding	Rfpl4	exon	ENSMUSG00000035191	NonProperStrand	27	chrX	19683228	19683244	protein_coding	Slc9a7	exon	ENSMUSG00000037341	NonProperStrand	136	1	-13.2873
chr8	4267337	4267649	protein_coding	Timm44	exon	ENSMUSG00000002949	ProperStrand	63	chr7	28146782	28146798	protein_coding	Spnb4	exon	ENSMUSG00000011751	NonProperStrand	84	1	-12.5407
chr15	10504979	10504995	protein_coding	Rai14	exon	ENSMUSG00000022246	ProperStrand	180	chr2	130101241	130101307	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-4.4537
chr4	116365513	116365536	protein_coding	Prdx1	exon	ENSMUSG00000028691	ProperStrand	41	chr9	110517307	110517387	protein_coding	Setd2	intron	ENSMUSG00000044791	ProperStrand	51	1	-14.4169
chr7	52382235	52382315	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	chr8	129468746	129468868	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	4	-2.8704
chr14	48313090	48313570	protein_coding	Ktn1	exon	ENSMUSG00000021843	ProperStrand	64	chr4	131866614	131866676	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	1	-8.9755
chr10	103853611	103853629	SINE	PB1D7	Alu	chr10PB1D7103853586	ProperStrand	1	chr1	89673593	89673677	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-inf
chr11	77994800	77994818	snoRNA	ENSMUSG00000064540_Snord42a	.	ENSMUSG00000064540	ProperStrand	142	chr1	162967513	162967548	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-1.9820
chr9	65914239	65914258	protein_coding	Ppib	utr3	ENSMUSG00000032383	ProperStrand	31	chr2	26494710	26494800	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.3375
chr9	106367075	106367092	protein_coding	Gpr62	exon	ENSMUSG00000091735	ProperStrand	5	chr11	106362639	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-12.5579
chr5	130300510	130300527	protein_coding	Cct6a	exon	ENSMUSG00000029447	ProperStrand	128	chr9	15119287	15119392	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	3	-9.0350
chr4	21751767	21751867	protein_coding	Usp45	exon	ENSMUSG00000040455	ProperStrand	40	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.7072
chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr5	113731301	113731317	protein_coding	Sgsm1	intron	ENSMUSG00000042216	NonProperStrand	2	1	-13.8986
chr5	42179262	42179352	protein_coding	Bod1l	utr3	ENSMUSG00000061755	ProperStrand	43	chr18	35714196	35714260	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.0642
chr7	133716050	133718522	protein_coding	Cln3	exon	ENSMUSG00000030720	ProperStrand	87	chr10	90581059	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-4.0987
chr11	101324328	101324379	protein_coding	Vat1	exon	ENSMUSG00000034993	ProperStrand	69	chr19	8963034	8963124	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.0449
chr13	75905621	75905650	protein_coding	Ell2	intron	ENSMUSG00000001542	ProperStrand	110	chr16	38158126	38158226	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	1	-7.4408
chr12	86588580	86588670	protein_coding	Mlh3	exon	ENSMUSG00000021245	ProperStrand	28	chr14	76247717	76247797	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-5.6497
chr11	6315899	6315933	protein_coding	Ppia	utr5	ENSMUSG00000071866	ProperStrand	127	chr11	77996560	77996612	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-4.6346
chr10	96080025	96080063	protein_coding	Btg1	exon	ENSMUSG00000036478	ProperStrand	21	chr4	131908688	131908720	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.9128
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr17	36051220	36051290	protein_coding-noncoding	Mrps18b	utr3	ENSMUSG00000024436	ProperStrand	4	4	-inf
chr4	43505786	43505876	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr13	68710000	68710083	protein_coding	Mtrr	exon	ENSMUSG00000034617	ProperStrand	14	1	-5.8657
chr19	5105023	5105081	protein_coding	Rab1b	intron	ENSMUSG00000024870	ProperStrand	133	chr6	38461893	38461909	protein_coding	Ubn2	utr3	ENSMUSG00000038538	ProperStrand	86	2	-17.2910
chr2	145077957	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	chr16	56035906	56035986	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	1	-3.5005
chr2	90235294	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	89681177	89681305	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	8	-0.7528
chr5	113302570	113302917	protein_coding	Myo18b	exon	ENSMUSG00000072720	ProperStrand	48	chr9	64023228	64023270	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	1	-8.8929
chr5	76050797	76050885	protein_coding	Kit	utr3	ENSMUSG00000005672	ProperStrand	58	chr15	98350189	98350279	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-4.8259
chr9	78023108	78023148	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr8	98389122	98390772	protein_coding	Got2	exon	ENSMUSG00000031672	ProperStrand	85	2	-8.5393
chr2	91613185	91613203	protein_coding	Ambra1	exon	ENSMUSG00000040506	ProperStrand	65	chr1	162967514	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-3.3279
chr11	86070710	86070756	protein_coding	Ints2	utr5	ENSMUSG00000018068	ProperStrand	17	chr11	115104844	115104861	protein_coding	Tmem104	exon	ENSMUSG00000045980	NonProperStrand	21	1	-17.8161
chr17	15869511	15869601	protein_coding	Chd1	exon	ENSMUSG00000023852	ProperStrand	82	chrX	34622941	34623021	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-2.6186
chr19	23140045	23140062	lincRNA	C330002G04Rik	intron	ENSMUSG00000087169	ProperStrand	34	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-10.0709
chr18	11605151	11605169	SINE	ID_B1	B4	chr18ID_B111605079	NonProperStrand	1	chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	1	-inf
chr9	3023515	3028855	lincRNA	Gm16869	intron	ENSMUSG00000087580	NonProperStrand	3	chr2	98507280	98507370	protein_coding	Gm10800	exon	ENSMUSG00000075014	ProperStrand	7	2	-inf
chr15	75906125	75906225	protein_coding	Puf60	intron	ENSMUSG00000002524	ProperStrand	18	chr5	130300497	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.7422
chr2	29200136	29200153	SINE	PB1D7	Alu	chr2PB1D729200042	ProperStrand	1	chr13	58500561	58501287	protein_coding	Hnrnpk	exon	ENSMUSG00000021546	ProperStrand	117	1	-inf
chr5	125342445	125342545	protein_coding	Ccdc92	utr5	ENSMUSG00000037979	ProperStrand	45	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-6.4359
chr17	75058684	75059728	protein_coding	Birc6	exon	ENSMUSG00000024073	NonProperStrand	36	chr4	64785906	64785924	protein_coding	Pappa	exon	ENSMUSG00000028370	NonProperStrand	32	1	-15.6287
chr17	31196051	31196073	protein_coding	Abcg1	intron	ENSMUSG00000024030	ProperStrand	36	chr14	33005038	33005093	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-4.9721
chr19	41986613	41990096	protein_coding	Pgam1	exon	ENSMUSG00000011752	ProperStrand	124	chr11	68347759	68349607	protein_coding	Pik3r6	exon	ENSMUSG00000046207	ProperStrand	5	2	-20.3015
chr4	98404066	98404129	protein_coding	L1td1	exon	ENSMUSG00000087166	ProperStrand	43	chr4	131908418	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.9253
chr9	122992710	122992726	protein_coding	Zdhhc3	exon	ENSMUSG00000025786	NonProperStrand	6	chr4	131865459	131865497	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-8.6503
chr3	14899206	14899296	protein_coding	Car2	intron	ENSMUSG00000027562	ProperStrand	14	chr16	23111704	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-14.8767
chr1	141319671	141319687	protein_coding	Zbtb41	utr5	ENSMUSG00000033964	NonProperStrand	145	chr2	153074271	153074323	protein_coding	Pofut1	exon	ENSMUSG00000046020	ProperStrand	17	1	-14.1068
chr10	79138266	79138282	protein_coding	Gm16517	exon	ENSMUSG00000020308	ProperStrand	43	chr8	126220367	126220384	protein_coding	Gm20388	intron	ENSMUSG00000092329	ProperStrand	295	1	-10.7927
chr8	31464422	31464440	LTR	MERVL_2A-int	ERVL	chr8MERVL_2A-int31464360	ProperStrand	6	chr10	80642628	80642658	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-10.8281
chr2	25079479	25079658	protein_coding	Tubb4b	exon	ENSMUSG00000036752	ProperStrand	58	chr16	23111765	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.9572
chr12	77447347	77447416	SINE	B3A	B2	chr12B3A77447321	NonProperStrand	1	chr9	53502717	53502735	protein_coding	Rab39	intron	ENSMUSG00000055069	ProperStrand	1	1	-inf
chr4	116235005	116235028	protein_coding	Gpbp1l1	intron	ENSMUSG00000034042	NonProperStrand	106	chr2	26493364	26493497	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	NonProperStrand	10	1	-15.8322
chr18	37153210	37153226	protein_coding	Pcdha4	intron	ENSMUSG00000007440	ProperStrand	8	chr15	89008369	89008394	protein_coding	Plxnb2	intron	ENSMUSG00000036606	ProperStrand	119	1	-16.0356
chr4	137184588	137184668	protein_coding	Usp48	intron	ENSMUSG00000043411	ProperStrand	135	chr11	69483701	69484133	protein_coding	Eif4a1	exon	ENSMUSG00000059796	ProperStrand	108	1	-10.5047
chr3	108357259	108357349	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	chr17	71990939	71990999	snoRNA	ENSMUSG00000092713_CT010429.1	.	ENSMUSG00000092713	ProperStrand	182	2	-4.4184
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	7944490	7944580	protein_coding	Yap1	intron	ENSMUSG00000053110	ProperStrand	68	5	-17.1664
chr8	87198994	87200018	protein_coding	Nacc1	exon	ENSMUSG00000001910	ProperStrand	130	chr17	13112490	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	3	-7.9314
chr4	58827448	58827465	protein_coding	AI314180	intron	ENSMUSG00000050812	NonProperStrand	5	chr10	23505187	23505278	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-9.7958
chr5	115939534	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr11	55296207	55296297	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-1.3140
chr5	140237322	140237392	protein_coding	Ints1	exon	ENSMUSG00000029547	ProperStrand	45	chr7	74189892	74189909	protein_coding	Adamts17	intron	ENSMUSG00000058145	NonProperStrand	73	1	-13.4998
chr4	139191367	139191437	protein_coding	Aldh4a1	exon	ENSMUSG00000028737	ProperStrand	20	chr7	116664794	116664884	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-4.5800
chr2	90607954	90608012	protein_coding-noncoding	Fnbp4	utr5	ENSMUSG00000008200	ProperStrand	5	chr16	94489387	94489477	protein_coding	Hlcs	exon	ENSMUSG00000040820	ProperStrand	22	4	-19.5561
chr7	116663669	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	chr16	38158126	38158231	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	5	-1.0279
chr2	83693562	83693578	protein_coding	Fam171b	exon	ENSMUSG00000048388	NonProperStrand	175	chr7	13846273	13846290	protein_coding	6330408A02Rik	utr3	ENSMUSG00000070814	ProperStrand	10	1	-14.8266
chr16	33056583	33057477	protein_coding	Rpl35a	utr5	ENSMUSG00000060636	ProperStrand	33	chr1	162965546	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-7.3503
chr14	80262508	80262525	lincRNA	Gm6999	intron	ENSMUSG00000075495	ProperStrand	265	chr3	107788167	107788200	protein_coding	Gstm2	exon	ENSMUSG00000040562	ProperStrand	2	1	-17.9922
chr10	17356773	17356790	SINE	B4A	B4	chr10B4A17356745	ProperStrand	4	chr3	79223176	79223193	protein_coding	Gm17359	intron	ENSMUSG00000091685	NonProperStrand	50	1	-18.8519
chr17	6434090	6434180	protein_coding	Dynlt1b	intron	ENSMUSG00000091454	ProperStrand	1	chr4	122968584	122968664	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-inf
chr8	74146698	74147045	protein_coding	Glt25d1	exon	ENSMUSG00000034807	ProperStrand	36	chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	1	-10.2171
chrX	160377262	160377280	protein_coding	Zrsr2	exon	ENSMUSG00000031370	ProperStrand	57	chr16	5050379	5050519	protein_coding	Ubn1	utr5	ENSMUSG00000039473	ProperStrand	35	1	-14.5039
chr9	44143154	44143986	protein_coding	H2afx	exon	ENSMUSG00000049932	ProperStrand	137	chr10	23505152	23505267	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-1.4663
chr11	59316552	59316595	protein_coding	Zkscan17	utr5	ENSMUSG00000020472	ProperStrand	23	chr9	15118338	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-5.3004
chr1	87983948	87983997	snoRNA	ENSMUSG00000077274_SNORA26	.	ENSMUSG00000077274	ProperStrand	361	chr17	35089002	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	2	-4.4226
chr2	150450772	150451520	protein_coding	Acss1	exon	ENSMUSG00000027452	ProperStrand	13	chr17	35087896	35087925	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-8.2652
chr15	34370545	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	chr11	116938556	116938749	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	10	-1.0238
chr2	26238708	26238798	protein_coding	Sdccag3	utr3	ENSMUSG00000026927	ProperStrand	10	chr4	131865413	131865493	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-7.5608
chr1	123457883	123457973	protein_coding	Ddx18	exon	ENSMUSG00000001674	ProperStrand	41	chr17	24857725	24857805	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.9570
chr3	147099971	147099990	LINE	Lx5	L1	chr3Lx5147099581	ProperStrand	1	chr9	15119665	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-inf
chr18	6213191	6213245	protein_coding	Kif5b	exon	ENSMUSG00000006740	ProperStrand	65	chr2	162905362	162905397	protein_coding	Mybl2	exon	ENSMUSG00000017861	ProperStrand	230	2	-16.4082
chr8	75411210	75411226	protein_coding	Large	intron	ENSMUSG00000004383	ProperStrand	48	chr15	34370631	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-3.9653
chr2	71085921	71085937	protein_coding	Dync1i2	exon	ENSMUSG00000027012	NonProperStrand	58	chr7	13516163	13516198	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	1	-8.7344
chr3	96218712	96218738	misc_RNA	Telomerase-vert	.	ENSMUSG00000064796	ProperStrand	443	chr1	89681260	89681350	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-1.8260
chr17	32290807	32290907	protein_coding	Notch3	exon	ENSMUSG00000038146	ProperStrand	181	chr12	110923175	110923215	snoRNA	ENSMUSG00000084487_SNORD113	.	ENSMUSG00000084487	ProperStrand	183	1	-8.8642
chr1	187028206	187028223	protein_coding	Rab3gap2	exon	ENSMUSG00000039318	ProperStrand	41	chr11	62416602	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-5.9124
chr13	62944660	62944677	protein_coding	Fbp2	intron	ENSMUSG00000021456	ProperStrand	100	chr7	52756967	52757023	protein_coding	Nucb1	exon	ENSMUSG00000030824	ProperStrand	49	1	-12.6971
chr2	160489133	160546677	protein_coding	Top1	exon	ENSMUSG00000070544	ProperStrand	14	chr16	23110909	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-4.0210
chr1	71077374	71077960	protein_coding	Bard1	exon	ENSMUSG00000026196	ProperStrand	44	chr19	8963082	8963172	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	8	-inf
chr2	155455150	155455168	protein_coding	Myh7b	exon	ENSMUSG00000074652	NonProperStrand	8	chr3	123210905	123210986	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.8655
chrX	99380375	99383215	protein_coding	Rps4x	exon	ENSMUSG00000031320	ProperStrand	139	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	11	-4.3892
chr17	38290745	38290764	LTR	MurERV4-int	ERVK	chr17MurERV4-int38290059	ProperStrand	21	chr12	86134585	86134601	protein_coding	Ltbp2	exon	ENSMUSG00000002020	ProperStrand	14	1	-18.6590
chr19	44188366	44188457	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr7	52381534	52381557	protein_coding	Rpl13a	exon	ENSMUSG00000074129	ProperStrand	269	7	-22.8018
chr5	145532249	145532339	protein_coding	Trrap	intron	ENSMUSG00000045482	ProperStrand	399	chr4	111289776	111289792	protein_coding	Agbl4	exon	ENSMUSG00000061298	NonProperStrand	33	1	-10.7243
chr8	125626932	125626979	snoRNA	ENSMUSG00000064450_Snord68	.	ENSMUSG00000064450	ProperStrand	181	chr11	69483136	69483226	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-1.6898
chr15	99843704	99843727	protein_coding	Larp4	utr3	ENSMUSG00000023025	ProperStrand	41	chr7	52381973	52382014	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-7.4707
chr15	100299084	100299100	lincRNA	5330439K02Rik	exon	ENSMUSG00000092050	NonProperStrand	36	chr8	86535304	86535320	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	1	-12.4660
chr17	25297655	25297712	protein_coding	Clcn7	utr3	ENSMUSG00000036636	ProperStrand	94	chr4	131908689	131908739	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-1.4264
chr3	88497951	88497985	protein_coding	2810403A07Rik	intron	ENSMUSG00000028060	ProperStrand	22	chr15	79908930	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-7.4689
chr2	129998643	129998694	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr11	69482355	69482374	snoRNA	ENSMUSG00000089542_snoU6-77	.	ENSMUSG00000089542	ProperStrand	138	2	-10.4338
chr16	31771877	31781883	protein_coding	Dlg1	exon	ENSMUSG00000022770	ProperStrand	69	chr3	108357255	108357345	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-4.2736
chr18	20629562	20629580	protein_coding	Dsg4	exon	ENSMUSG00000001804	ProperStrand	2	chr1	89673538	89673638	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	NonProperStrand	27	1	-21.0126
chr15	36528058	36528745	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr6	124803097	124803113	protein_coding	Leprel2	exon	ENSMUSG00000023191	NonProperStrand	1	1	-inf
chr3	108237119	108240429	protein_coding	Sars	exon	ENSMUSG00000068739	ProperStrand	45	chrX	34622911	34622991	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-3.6993
chr9	86360894	86373238	protein_coding	Dopey1	utr5	ENSMUSG00000034973	ProperStrand	10	chr19	8799581	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-10.4116
chr13	9833563	9833666	LINE	L1Md_T	L1	chr13L1Md_T9831266	NonProperStrand	15	chr6	87947223	87947253	protein_coding	Gm5577	intron	ENSMUSG00000084950	ProperStrand	6	1	-19.9831
chr2	130102051	130102128	protein_coding-noncoding	Nop56	utr5	ENSMUSG00000027405	ProperStrand	19	chr1	155329875	155329965	protein_coding	Dhx9	exon	ENSMUSG00000042699	ProperStrand	98	1	-14.6692
chr11	115279205	115279756	protein_coding	Atp5h	exon	ENSMUSG00000034566	ProperStrand	11	chr1	162966000	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-6.9371
chr2	29863385	29863704	protein_coding	Spna2	exon	ENSMUSG00000057738	ProperStrand	222	chr16	23110466	23110585	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-1.3151
chr18	10052128	10052151	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr5	116914520	116914599	antisense	2410137F16Rik	.	ENSMUSG00000086219	ProperStrand	7	1	-13.2261
chr6	54541288	54541323	protein_coding	Fkbp14	intron	ENSMUSG00000038074	ProperStrand	3	chr16	23111755	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-13.4294
chr5	130036433	130036476	protein_coding	Sfswap	intron	ENSMUSG00000029439	ProperStrand	34	chr11	6428077	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.2505
chr5	138738049	138738158	protein_coding-noncoding	Stag3	utr5	ENSMUSG00000036928	ProperStrand	1	chr8	95355006	95355022	protein_coding	Mmp2	intron	ENSMUSG00000031740	ProperStrand	42	1	-inf
chr7	38265482	38265498	protein_coding	Zfp536	exon	ENSMUSG00000043456	NonProperStrand	236	chr10	110918560	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-1.2092
chr14	87912387	87912403	protein_coding	Tdrd3	utr3	ENSMUSG00000022019	NonProperStrand	46	chr19	8798484	8798524	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-5.7313
chr1	10065120	10065136	protein_coding	Cspp1	intron	ENSMUSG00000056763	NonProperStrand	3	chr4	131865896	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.6896
chr10	28306864	28308790	protein_coding	Ptprk	exon	ENSMUSG00000019889	ProperStrand	45	chr7	29404721	29404738	protein_coding	C330005M16Rik	intron	ENSMUSG00000037469	ProperStrand	23	1	-15.8211
chr7	125270018	125270703	protein_coding	Arl6ip1	exon	ENSMUSG00000030654	ProperStrand	57	chr4	131865856	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	5	-9.4750
chr18	35741254	35741300	protein_coding	Matr3	exon	ENSMUSG00000037236	ProperStrand	90	chr11	69483190	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	4	-7.0231
chr8	74745424	74745524	protein_coding	Fam32a	intron	ENSMUSG00000003039	ProperStrand	11	chr1	88252838	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	4	-20.4575
chr3	89219694	89219745	protein_coding	Cks1b	utr3	ENSMUSG00000028044	ProperStrand	10	chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	1	-13.1528
chr8	74446729	74446745	protein_coding	Zfp617	intron	ENSMUSG00000066880	NonProperStrand	208	chr7	148634813	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-1.8162
chr1	167145870	167145916	protein_coding	Tiprl	exon	ENSMUSG00000040843	ProperStrand	5	chr15	79913289	79913341	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-14.0624
chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	chr5	122580412	122584741	protein_coding	Ccdc63	utr5	ENSMUSG00000043036	ProperStrand	120	1	-11.1747
chr2	93135030	93135120	protein_coding-noncoding	Tspan18	utr3	ENSMUSG00000027217	NonProperStrand	1	chr15	10428260	10428340	protein_coding	Rad1	utr3	ENSMUSG00000022248	NonProperStrand	2	1	-inf
chr11	93315153	93315169	protein_coding	Car10	intron	ENSMUSG00000056158	ProperStrand	25	chr15	82980190	82980225	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-8.8985
chr18	70624048	70624065	protein_coding	4930503L19Rik	intron	ENSMUSG00000044906	ProperStrand	1	chr11	106362641	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-inf
chr15	34012852	34066546	protein_coding	Mtdh	exon	ENSMUSG00000022255	ProperStrand	37	chr10	23505152	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-5.4680
chr11	78390172	78390252	protein_coding	Nlk	intron	ENSMUSG00000017376	ProperStrand	26	chr5	103854542	103891155	protein_coding	Ptpn13	utr5	ENSMUSG00000034573	NonProperStrand	74	2	-20.1808
mmu-miR-6240	1	23	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr5	140212129	140212146	protein_coding	Micall2	utr5	ENSMUSG00000036718	NonProperStrand	18	1	-8.3164
chr7	20036905	20036921	protein_coding	Mark4	exon	ENSMUSG00000030397	NonProperStrand	45	chr7	128178078	128178098	protein_coding	Mettl9	utr5	ENSMUSG00000030876	ProperStrand	20	1	-16.1027
chr12	109878487	109878509	protein_coding	Evl	intron	ENSMUSG00000021262	NonProperStrand	6	chr4	121870883	122132507	pseudogene	Gm12896	.	ENSMUSG00000083558	NonProperStrand	19	1	-19.0985
chr14	51427120	51427211	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr15	5068451	5068478	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-0.8203
chr10	127513751	127513837	protein_coding	Ptges3	utr3	ENSMUSG00000071072	ProperStrand	89	chr4	131908236	131908298	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-1.8079
chr14	49278933	49278994	protein_coding	Otx2	exon	ENSMUSG00000021848	ProperStrand	19	chr7	118219584	118219641	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	4	-19.4273
chr6	115552200	115552218	protein_coding	Mkrn2	intron	ENSMUSG00000000439	ProperStrand	60	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.2762
chr19	5801841	5801921	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr4	46481658	46482843	protein_coding	Anp32b	exon	ENSMUSG00000028333	ProperStrand	229	1	-4.9151
chr3	95793689	95793747	protein_coding	Plekho1	intron	ENSMUSG00000015745	NonProperStrand	1	chr1	181476147	181476163	protein_coding	Tfb2m	exon	ENSMUSG00000026492	ProperStrand	5	1	-inf
chr7	52958453	52958469	protein_coding	Car11	exon	ENSMUSG00000003273	NonProperStrand	250	chr5	108334195	108334242	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-2.2271
chr6	123089131	123089269	protein_coding	Clec4a2	exon	ENSMUSG00000030148	ProperStrand	44	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.2687
chr13	76341035	76341055	protein_coding	Fam81b	intron	ENSMUSG00000078966	NonProperStrand	220	chr11	6428042	6428089	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.1147
chr11	116533862	116533893	snoRNA	ENSMUSG00000065640_Snord1c	.	ENSMUSG00000065640	ProperStrand	373	chr17	35089181	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-2.1364
chr1	63225829	63225929	protein_coding	Eef1b2	exon	ENSMUSG00000025967	ProperStrand	106	chr16	23110524	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	9	-17.6367
chr15	5067624	5068577	protein_coding	Rpl37	exon	ENSMUSG00000041841	ProperStrand	69	chr16	23110453	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.2265
chr2	22444486	22444816	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	chr5	130300445	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	8	-1.0686
chr2	172203302	172203361	protein_coding	Cstf1	exon	ENSMUSG00000027498	NonProperStrand	3	chr16	57391708	57391757	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	1	-16.7106
chr4	134259226	134259243	protein_coding	Man1c1	exon	ENSMUSG00000037306	NonProperStrand	20	chr2	63936035	63936053	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-10.0801
chr3	99942712	99942748	protein_coding	Wdr3	exon	ENSMUSG00000033285	ProperStrand	30	chr11	62416578	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-10.5893
chr2	153058002	153058018	protein_coding	Plagl2	exon	ENSMUSG00000051413	NonProperStrand	2	chr7	29136525	29136599	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-9.5181
chr1	173210093	173210302	protein_coding	Ppox	exon	ENSMUSG00000062729	ProperStrand	3	chr8	13876176	13876226	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-13.4971
chr1	18204299	18204315	pseudogene	Defb44-ps	.	ENSMUSG00000070977	ProperStrand	37	chr19	8799597	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-7.7316
chr13	62846892	62846992	LTR	MTD	MaLR	chr13MTD62846912	ProperStrand	1	chr3	85944541	85944588	snoRNA	ENSMUSG00000064390_Rnu73b	.	ENSMUSG00000064390	ProperStrand	164	1	-inf
chr3	69121279	69121296	protein_coding	Ppm1l	utr5	ENSMUSG00000027784	NonProperStrand	29	chr5	5322630	5322646	protein_coding	Cdk14	intron	ENSMUSG00000028926	ProperStrand	20	1	-16.9402
chr18	84889628	84889646	lincRNA	D030046N08Rik	exon	ENSMUSG00000089760	ProperStrand	10	chr3	123210924	123210985	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.4047
chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-2.7575
chr10	120709244	120712786	protein_coding	Tbc1d30	exon	ENSMUSG00000052302	ProperStrand	233	chr15	98350209	98350255	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-2.2924
chr15	99611668	99613989	protein_coding	Lima1	exon	ENSMUSG00000023022	ProperStrand	159	chr2	5332851	5332872	protein_coding	Camk1d	intron	ENSMUSG00000039145	ProperStrand	50	2	-18.1675
chr18	30500946	30501047	protein_coding	Pik3c3	intron	ENSMUSG00000033628	ProperStrand	7	chr18	35716811	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-6.2708
chr19	60857911	60866427	protein_coding	Eif3a	utr5	ENSMUSG00000024991	ProperStrand	287	chr4	131908317	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-0.7592
chr12	73637493	73637509	protein_coding	1810048J11Rik	utr5	ENSMUSG00000034501	NonProperStrand	6	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-13.6880
chr6	87950153	87950233	protein_coding	Rab7	utr3	ENSMUSG00000079477	ProperStrand	33	chr7	116663675	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-6.1093
chr11	68864545	68864645	protein_coding	Aurkb	utr3	ENSMUSG00000020897	ProperStrand	11	chr1	162968445	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-9.5125
chr16	20684312	20684387	snoRNA	ENSMUSG00000077239_Snord66	.	ENSMUSG00000077239	ProperStrand	159	chr11	62418014	62418036	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	3	-9.0841
chr1	9662629	9662674	protein_coding	Mybl1	exon	ENSMUSG00000025912	ProperStrand	10	chr5	130295414	130295488	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-8.8613
chr17	37102070	37102107	protein_coding	Znrd1as	exon	ENSMUSG00000036214	ProperStrand	4	chr12	112779229	112779282	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	2	-16.7816
chr2	127421586	127421625	protein_coding	Mrps5	exon	ENSMUSG00000027374	ProperStrand	84	chr4	131908810	131908893	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-1.6437
chr5	75274800	75274880	SINE	B3	B2	chr5B375274795	ProperStrand	1	chr5	75275193	75275283	SINE	PB1D10	Alu	chr5PB1D1075275216	ProperStrand	1	1	-inf
chr5	137802523	137802623	protein_coding	Ephb4	exon	ENSMUSG00000029710	ProperStrand	49	chr7	116664849	116664924	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.9031
chr11	62327288	62327362	protein_coding	Pigl	utr3	ENSMUSG00000014245	ProperStrand	21	chr5	130295470	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	4	-21.4626
chr7	82820213	82820230	protein_coding	Akap13	intron	ENSMUSG00000066406	NonProperStrand	9	chr9	15118256	15118321	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-7.2077
chr11	67856021	67856091	protein_coding	Stx8	intron	ENSMUSG00000020903	ProperStrand	21	chr3	123210853	123210941	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-6.6806
chr19	12661801	12661817	protein_coding	Fam111a	exon	ENSMUSG00000024691	ProperStrand	2	chr4	155366536	155366553	protein_coding	B3galt6	exon	ENSMUSG00000050796	ProperStrand	40	1	-inf
chr4	33249935	33249952	protein_coding	Gabrr1	utr3	ENSMUSG00000028280	NonProperStrand	1	chr7	134671387	134671504	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-inf
chr10	4999647	4999663	protein_coding	Syne1	exon	ENSMUSG00000019769	ProperStrand	49	chr14	51546241	51546322	protein_coding	Apex1	exon	ENSMUSG00000035960	ProperStrand	6	1	-18.7927
chr2	90235300	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	137883760	137883778	protein_coding	Zan	intron	ENSMUSG00000079173	NonProperStrand	4	1	-10.0500
chr6	136560263	136560305	LTR	RMER13A	ERVK	chr6RMER13A136559891	ProperStrand	1	chr6	136555716	136555743	protein_coding	Atf7ip	utr3	ENSMUSG00000030213	ProperStrand	22	1	-inf
chr13	23647194	23647276	protein_coding	Hist1h1d	exon	ENSMUSG00000052565	ProperStrand	78	chr18	35716686	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-3.2194
chr4	151355459	151355476	protein_coding	Dnajc11	utr3	ENSMUSG00000039768	NonProperStrand	16	chr8	109537424	109537487	protein_coding	Sntb2	utr3	ENSMUSG00000041308	ProperStrand	41	1	-16.8745
chr16	31847000	31853965	protein_coding	Dlg1	exon	ENSMUSG00000022770	ProperStrand	69	chr2	26493366	26493388	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-3.4840
chrX	19868661	19868677	protein_coding	Slc9a7	exon	ENSMUSG00000037341	ProperStrand	17	chr17	68981655	68981678	protein_coding	L3mbtl4	intron	ENSMUSG00000041565	NonProperStrand	4	1	-inf
chr11	107353375	107353417	protein_coding	Psmd12	exon	ENSMUSG00000020720	ProperStrand	31	chr2	154171683	154171700	protein_coding	Cdk5rap1	exon	ENSMUSG00000027487	ProperStrand	75	1	-14.1993
chr12	103632702	103632718	protein_coding	Lgmn	utr3	ENSMUSG00000021190	ProperStrand	18	chr7	117189863	117189945	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-8.6272
chr2	71658087	71658159	protein_coding	Itga6	exon	ENSMUSG00000027111	ProperStrand	54	chr1	162967489	162967513	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-6.2227
chr3	106909227	106909243	protein_coding	Kcna2	utr3	ENSMUSG00000040724	ProperStrand	17	chr8	73419683	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-5.5405
chr7	99814355	99817959	protein_coding	Pcf11	exon	ENSMUSG00000041328	ProperStrand	27	chr1	162966813	162966852	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-7.8536
chr14	119225645	119225664	protein_coding	Cldn10	intron	ENSMUSG00000022132	NonProperStrand	2	chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	1	-18.0699
chr13	101299959	101300049	protein_coding	Ocln	intron	ENSMUSG00000021638	ProperStrand	3	chr18	33954817	33954897	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-9.7168
chr8	18882146	18882211	protein_coding	Agpat5	utr3	ENSMUSG00000031467	ProperStrand	7	chr9	15514257	15514276	protein_coding	Slc36a4	exon	ENSMUSG00000043885	ProperStrand	94	1	-16.7308
chr8	131234274	131234364	protein_coding	Itgb1	exon	ENSMUSG00000025809	ProperStrand	35	chr7	118219578	118219658	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	3	-12.2700
chr19	55144104	55144137	protein_coding	Gpam	utr3	ENSMUSG00000024978	ProperStrand	19	chr5	130300536	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.6362
chr4	57156387	57156407	Low_complexity	GC_rich	Low_complexity	chr4GC_rich57156357	NonProperStrand	5	chr4	131908689	131908774	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.7672
chrX	71549487	71549578	protein_coding	Atp6ap1	utr3	ENSMUSG00000019087	ProperStrand	11	chr16	23110909	23110991	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.6241
chr10	60881143	60886215	protein_coding	Nodal	exon	ENSMUSG00000037171	ProperStrand	30	chr4	131865855	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	5	-13.3041
chr6	117873735	117873818	protein_coding	Hnrnpf	utr5	ENSMUSG00000042079	ProperStrand	147	chr9	15119649	15119694	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-2.3570
chr19	46139247	46139301	protein_coding	Pprc1	exon	ENSMUSG00000055491	ProperStrand	143	chr9	120038565	120038612	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-2.9666
chr6	51414500	51417021	protein_coding	Hnrnpa2b1	exon	ENSMUSG00000004980	ProperStrand	166	chr7	29136526	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-1.7630
chr19	9052125	9052459	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	chr18	33954858	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	12	-16.4879
chr17	24856708	24856762	antisense	Snhg9	.	ENSMUSG00000090101	ProperStrand	218	chr11	99885311	99885327	protein_coding	Krt33b	exon	ENSMUSG00000057723	NonProperStrand	352	1	-7.1951
chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr7	13516132	13516200	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	5	-10.2926
chr2	13242810	13242832	lincRNA	Gm13270	intron	ENSMUSG00000086358	ProperStrand	4	chr9	120039582	120039682	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-8.8220
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	40923681	40923770	protein_coding	Nfx1	exon	ENSMUSG00000028423	ProperStrand	39	2	-8.7095
chr17	37139639	37139663	protein_coding	Zfp57	utr5	ENSMUSG00000036036	ProperStrand	39	chr11	6519819	6519919	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	2	-13.9986
chr7	26519740	26519813	protein_coding	Hnrnpul1	exon	ENSMUSG00000040725	ProperStrand	84	chr19	8963093	8963183	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.7343
chr11	98297305	98297321	protein_coding	Erbb2	exon	ENSMUSG00000062312	ProperStrand	24	chr10	110918549	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-5.1975
chr8	63408073	63408089	protein_coding	Clcn3	exon	ENSMUSG00000004319	ProperStrand	93	chr11	106362568	106362635	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-6.5349
chr4	140723745	140723761	protein_coding	Fbxo42	exon	ENSMUSG00000028920	ProperStrand	91	chr7	29136525	29136574	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.6941
chr17	28465784	28465818	protein_coding	Rpl10a	exon	ENSMUSG00000037805	ProperStrand	121	chr1	102076758	102076792	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	1	-8.0326
chr7	150748878	150750889	protein_coding	Cars	exon	ENSMUSG00000010755	ProperStrand	62	chr7	67123693	67123740	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	1	-9.4729
chr12	60232432	60232449	protein_coding	Ctage5	utr5	ENSMUSG00000021000	NonProperStrand	3	chr4	131865428	131865518	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-10.2531
chr1	129706342	129706432	LINE	Lx2	L1	chr1Lx2129706029	NonProperStrand	1	chr15	21097045	21097125	protein_coding	Cdh12	intron	ENSMUSG00000040452	ProperStrand	2	1	-inf
chr4	41150098	41150136	snoRNA	ENSMUSG00000089265_SNORD121A	.	ENSMUSG00000089265	ProperStrand	370	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-1.9131
chr7	52381719	52381736	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	chr15	5068408	5068474	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	4	-4.7294
chr9	19462003	19462083	LINE	L1Md_A	L1	chr9L1Md_A19461964	NonProperStrand	28	chr3	78484481	78484571	LTR	MTE2a	MaLR	chr3MTE2a78484322	ProperStrand	1	1	-inf
chr14	65372856	65372896	protein_coding	Kif13b	intron	ENSMUSG00000060012	ProperStrand	37	chr14	65372754	65372853	snoRNA	ENSMUSG00000064442_SNORA36	.	ENSMUSG00000064442	ProperStrand	296	8	-19.9786
chr3	135524303	135524319	protein_coding	Slc39a8	intron	ENSMUSG00000053897	ProperStrand	7	chr18	35716696	35716760	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-6.2708
chrX	150765543	150765559	LINE	L1_Mus2	L1	chrXL1_Mus2150765117	NonProperStrand	49	chr7	24779190	24779213	SINE	ID_B1	B4	chr7ID_B124779183	NonProperStrand	54	1	-13.9388
chr7	20011487	20011503	protein_coding	Mark4	exon	ENSMUSG00000030397	NonProperStrand	45	chr8	72287170	72287188	protein_coding	Zfp866	utr3	ENSMUSG00000043090	NonProperStrand	134	1	-12.2809
chr14	98738585	98738601	LINE	L1MEf	L1	chr14L1MEf98738356	ProperStrand	8	chr7	67123681	67123728	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	1	-13.6775
chr13	63273990	63274008	protein_coding	2010111I01Rik	intron	ENSMUSG00000021458	ProperStrand	32	chr8	86096940	86096992	protein_coding	Tecr	exon	ENSMUSG00000031708	ProperStrand	100	2	-inf
chr7	13516142	13516220	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr3	123210854	123210979	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	8	-1.6998
chr4	147279947	147279964	SINE	RSINE1	B4	chr4RSINE1147279843	NonProperStrand	2	chr16	64851346	64851368	Simple_repeat	(CCG)n	Simple_repeat	chr16(CCG)n64851329	NonProperStrand	15	1	-inf
chr18	61736876	61738390	protein_coding	Csnk1a1	exon	ENSMUSG00000024576	ProperStrand	64	chr17	13112533	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-4.4563
chr11	53351272	53351323	protein_coding	Sept8	exon	ENSMUSG00000018398	ProperStrand	10	chr10	110918552	110918642	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-6.9682
chr2	29922265	29926103	protein_coding	Set	exon	ENSMUSG00000054766	ProperStrand	167	chr1	162967491	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-3.1749
chr1	55210786	55210855	protein_coding	Mob4	utr3	ENSMUSG00000025979	ProperStrand	7	chr15	82686493	82686553	protein_coding	Tcf20	exon	ENSMUSG00000041852	ProperStrand	658	1	-12.9449
chr8	96703605	96703642	protein_coding	Mt1	intron	ENSMUSG00000031765	ProperStrand	92	chr7	117189864	117189933	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	4	-16.4788
chr1	40053934	40053951	protein_coding	Map4k4	exon	ENSMUSG00000026074	ProperStrand	348	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-4.3051
chr5	107583286	107583345	protein_coding	Tgfbr3	exon	ENSMUSG00000029287	ProperStrand	27	chr16	23110911	23111001	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.1875
chr14	65372765	65372814	snoRNA	ENSMUSG00000064442_SNORA36	.	ENSMUSG00000064442	ProperStrand	296	chr17	24857717	24857808	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	9	-7.8456
chr13	23790281	23790315	protein_coding	Hist1h4c	exon	ENSMUSG00000060678	ProperStrand	19	chr7	116663640	116663762	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.6387
chr17	91177463	91177480	protein_coding	Nrxn1	intron	ENSMUSG00000024109	NonProperStrand	22	chr5	77390177	77390228	protein_coding	Paics	exon	ENSMUSG00000029247	ProperStrand	78	1	-14.8176
chr12	110786299	110786399	lincRNA	Meg3	intron	ENSMUSG00000021268	ProperStrand	61	chr16	23111435	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.2363
chr2	90235305	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	28466345	28466387	protein_coding	Rpl10a	exon	ENSMUSG00000037805	ProperStrand	121	1	-3.1584
chr7	71349428	71349452	protein_coding	Trpm1	exon	ENSMUSG00000030523	ProperStrand	9	chr4	131865868	131865987	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-17.1106
chr4	134926614	134927796	protein_coding	A330049M08Rik	exon	ENSMUSG00000043924	ProperStrand	130	chr3	68889331	68889370	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-1.9321
chr2	109739296	109739340	protein_coding	Lin7c	utr3	ENSMUSG00000027162	ProperStrand	15	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-8.6280
chr13	58117952	58117968	protein_coding	Klhl3	intron	ENSMUSG00000014164	NonProperStrand	11	chr1	59748785	59748802	snoRNA	ENSMUSG00000077345_Snord70	.	ENSMUSG00000077345	ProperStrand	61	1	-16.6840
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr13	21262109	21262159	tRNA	tRNA63-LeuAAG	.	1934649	ProperStrand	21	1	-9.0365
chr2	132134227	132134284	protein_coding	Cds2	utr3	ENSMUSG00000058793	ProperStrand	47	chr2	130103751	130103795	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	2	-14.2207
chr6	83058987	83059007	protein_coding-noncoding	Ccdc142	utr3	ENSMUSG00000079511	ProperStrand	1	chr2	158182156	158182184	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-inf
chr13	73651919	73651960	protein_coding	Lpcat1	exon	ENSMUSG00000021608	ProperStrand	42	chr16	23111452	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.7838
chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-5.3776
chr11	82716532	82716580	protein_coding	Nle1	exon	ENSMUSG00000020692	ProperStrand	13	chr12	106269483	106269559	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	2	-11.6132
chr2	4912142	4912203	protein_coding	Mcm10	utr3	ENSMUSG00000026669	ProperStrand	21	chr3	123210884	123210974	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.9390
chr7	114711149	114711166	protein_coding	Olfml1	utr5	ENSMUSG00000051041	NonProperStrand	3	chr4	131908689	131908754	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-6.9471
chr8	129686084	129686114	protein_coding	Pard3	intron	ENSMUSG00000025812	ProperStrand	44	chr15	79913288	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-7.0005
chr1	173996496	173996596	protein_coding	Ncstn	utr3	ENSMUSG00000003458	ProperStrand	20	chr1	162967547	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-5.5860
chr5	108332833	108332880	protein_coding	Rpl5	exon	ENSMUSG00000058558	ProperStrand	235	chr5	130300474	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-2.1533
chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	chr10	110918638	110918676	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-0.7806
chr11	94189589	94189649	protein_coding	Ankrd40	exon	ENSMUSG00000020864	ProperStrand	11	chr11	69037669	69037685	protein_coding	Gucy2e	exon	ENSMUSG00000020890	NonProperStrand	99	1	-15.7557
chr18	70076544	70076561	LTR	RLTR16	ERVK	chr18RLTR1670076480	ProperStrand	1	chr7	52381973	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-inf
chr7	51747385	51747547	protein_coding	2310044H10Rik	exon	ENSMUSG00000008140	ProperStrand	14	chr19	23332023	23332040	protein_coding	Smc5	exon	ENSMUSG00000024943	ProperStrand	146	1	-14.4971
chr17	35822057	35822257	protein_coding	Ddr1	exon	ENSMUSG00000003534	ProperStrand	129	chr2	131005220	131005236	protein_coding	Cenpb	exon	ENSMUSG00000068267	NonProperStrand	38	1	-12.6989
chr2	38280204	38280224	lincRNA	Gm13589	intron	ENSMUSG00000085950	NonProperStrand	31	chr4	131908236	131908355	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-4.3850
chr5	121655016	121655126	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	chr2	103880882	103880956	snoRNA	ENSMUSG00000087739_SCARNA21	.	ENSMUSG00000087739	ProperStrand	50	4	-13.2713
chr7	134461666	134461730	protein_coding	Itgal	intron	ENSMUSG00000030830	ProperStrand	38	chr4	131865391	131865469	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	2	-8.0737
chr5	30441216	30441233	protein_coding	Fam59b	exon	ENSMUSG00000044576	NonProperStrand	20	chr16	23110909	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.6223
chr14	124353869	124353886	protein_coding	Itgbl1	exon	ENSMUSG00000032925	ProperStrand	159	chr1	162965981	162965999	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-1.9139
chr3	121160102	121160192	protein_coding	Cnn3	exon	ENSMUSG00000053931	ProperStrand	77	chr18	35716766	35716846	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.7704
chr6	120348998	120352546	protein_coding	Kdm5a	exon	ENSMUSG00000030180	ProperStrand	57	chr2	26768416	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	3	-13.2222
chr3	62281589	62283283	protein_coding	Dhx36	exon	ENSMUSG00000027770	ProperStrand	16	chr16	23110986	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-3.6512
chr7	134400774	134400831	protein_coding	Dctpp1	exon	ENSMUSG00000042462	ProperStrand	14	chr9	15119994	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-10.2015
chr12	89699698	89699714	protein_coding	Adck1	utr3	ENSMUSG00000021044	NonProperStrand	42	chr1	129228452	129228519	snoRNA	ENSMUSG00000093146_AC131793.1	.	ENSMUSG00000093146	ProperStrand	119	3	-21.2326
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr11	58866008	58866025	protein_coding	Obscn	exon	ENSMUSG00000061462	ProperStrand	81	1	-8.3259
chr1	152268927	152269668	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	chr16	44140168	44140212	protein_coding	Naa50	utr5	ENSMUSG00000022698	ProperStrand	56	1	-9.0466
chr11	57866137	57874957	protein_coding	Larp1	exon	ENSMUSG00000037331	ProperStrand	201	chr17	35299505	35299642	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	5	-11.7214
chr19	8799020	8799097	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	chr11	69483136	69483285	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	26	-2.1624
chr3	16104215	16104315	protein_coding	Ythdf3	exon	ENSMUSG00000047213	ProperStrand	22	chr7	148634776	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-5.9356
chr2	161946165	161946183	protein_coding	Ptprt	intron	ENSMUSG00000053141	ProperStrand	28	chr11	106362304	106362327	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-7.3584
chr1	88253773	88253815	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chr17	24368316	24368344	protein_coding	Ccnf	exon	ENSMUSG00000072082	ProperStrand	149	1	-5.5637
chr4	53551348	53554228	protein_coding	Slc44a1	exon	ENSMUSG00000028412	ProperStrand	38	chr16	23111741	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-4.6859
chr1	155316009	155316069	protein_coding	Dhx9	exon	ENSMUSG00000042699	ProperStrand	98	chr16	23111773	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.1823
chr19	5690423	5690439	protein_coding	Map3k11	exon	ENSMUSG00000004054	ProperStrand	12	chr8	129468746	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	4	-19.7100
chr1	133252362	133252452	protein_coding	Srgap2	intron	ENSMUSG00000026425	ProperStrand	299	chr11	54302790	54304332	protein_coding	Fnip1	exon	ENSMUSG00000035992	ProperStrand	16	1	-12.7815
chr2	121276791	121276807	protein_coding	Serinc4	intron	ENSMUSG00000046110	ProperStrand	13	chr14	79517726	79517748	protein_coding	1300010F03Rik	intron	ENSMUSG00000058997	NonProperStrand	10	1	-21.7531
chr3	89750435	89750451	protein_coding	Atp8b2	exon	ENSMUSG00000060671	ProperStrand	140	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.8323
chr11	119141978	119142058	protein_coding	Gaa	intron	ENSMUSG00000025579	ProperStrand	149	chr19	8963085	8963175	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-0.9398
chr9	95848711	95848801	protein_coding	Atr	intron	ENSMUSG00000032409	ProperStrand	44	chr4	131865891	131865971	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.2687
chr5	130295431	130295521	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	chr10	107800719	107800797	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	1	-0.8362
chr7	149170854	149171340	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	chr11	69483134	69483279	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	4	-4.3669
chr2	90235297	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	10111461	10111478	protein_coding	Itih5	intron	ENSMUSG00000025780	NonProperStrand	12	1	-7.6663
chr1	88247741	88247876	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	chr1	162968212	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	3	-1.0393
chr7	86509016	86509106	protein_coding	Abhd2	utr3	ENSMUSG00000039202	ProperStrand	47	chr12	60141423	60141503	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-7.3155
chr13	63612936	63612952	protein_coding	Ptch1	exon	ENSMUSG00000021466	NonProperStrand	118	chr4	155366536	155366553	protein_coding	B3galt6	exon	ENSMUSG00000050796	ProperStrand	40	1	-12.7747
chr7	140951254	140951270	protein_coding	Dhx32	exon	ENSMUSG00000030986	ProperStrand	100	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-6.7245
chr17	36029665	36029725	protein_coding	2310061I04Rik	utr3	ENSMUSG00000050705	ProperStrand	8	chr15	34370545	34370645	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-12.2805
chr2	52272210	52280203	protein_coding	Arl5a	utr5	ENSMUSG00000036093	ProperStrand	15	chr4	131866238	131866292	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-6.3678
chr13	19684241	19684257	protein_coding	Epdr1	utr3	ENSMUSG00000002808	ProperStrand	46	chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	1	-9.3629
chr7	13508330	13511103	protein_coding	Rps5	exon	ENSMUSG00000012848	ProperStrand	108	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-0.7825
chr11	32114939	32115039	protein_coding	Rhbdf1	exon	ENSMUSG00000020282	ProperStrand	23	chr18	35716824	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.8840
chr10	59205374	59205474	protein_coding-noncoding	Micu1	utr5	ENSMUSG00000020111	ProperStrand	1	chr2	130101262	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-inf
chr16	48931402	48933936	protein_coding	Dzip3	exon	ENSMUSG00000064061	ProperStrand	10	chr7	117189864	117189919	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	2	-15.6802
chr9	120039944	120039997	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	chr9	120037956	120038054	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-1.4158
chr5	116630863	116630879	protein_coding	Ccdc60	exon	ENSMUSG00000043913	NonProperStrand	4	chr3	88715213	88715230	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-12.8959
chr11	75401620	75401664	protein_coding	Pitpna	utr5	ENSMUSG00000017781	ProperStrand	12	chrX	117538177	117538194	protein_coding	Pcdh11x	intron	ENSMUSG00000034755	NonProperStrand	2	1	-inf
chr7	112532774	112532855	protein_coding	Fam160a2	exon	ENSMUSG00000044465	ProperStrand	85	chr2	63936036	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-7.1672
chrX	75224635	75224651	LTR	RLTR1D	ERV1	chrXRLTR1D75224032	ProperStrand	3	chr11	53426086	53426103	protein_coding	Il4	exon	ENSMUSG00000000869	NonProperStrand	11	3	-inf
chr17	88077661	88077677	protein_coding	Msh2	exon	ENSMUSG00000024151	ProperStrand	124	chr11	106362640	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-5.9690
chr12	73889758	73889849	protein_coding	Ppm1a	utr3	ENSMUSG00000021096	ProperStrand	53	chr2	152705935	152706804	protein_coding	Tpx2	exon	ENSMUSG00000027469	ProperStrand	111	25	-20.2296
chr11	71597436	71597458	protein_coding	Wscd1	intron	ENSMUSG00000020811	ProperStrand	3	chr4	131908689	131908784	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-6.9471
chr10	23506278	23506334	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	chr3	88497852	88497980	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	2	-2.9315
chr11	6428090	6428157	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr14	31829399	31829434	snoRNA	ENSMUSG00000077797_Snord19	.	ENSMUSG00000077797	ProperStrand	62	1	-3.1331
chr15	98865017	98867493	protein_coding	Tuba1c	exon	ENSMUSG00000043091	ProperStrand	28	chr7	148634724	148634836	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-8.9686
chr19	8800355	8800457	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	chr2	32818850	32818942	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	35	-14.8143
chr18	73863389	73863407	protein_coding	Smad4	utr5	ENSMUSG00000024515	NonProperStrand	4	chr1	102076758	102076790	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	1	-15.1060
chr6	125118222	125118312	protein_coding	Ncapd2	utr3	ENSMUSG00000038252	ProperStrand	170	chr5	121655027	121655107	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-1.9317
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr5	23358039	23358097	snoRNA	ENSMUSG00000093321_Snord93	.	ENSMUSG00000093321	ProperStrand	218	1	-7.8260
chr8	11516244	11517859	protein_coding	Cars2	exon	ENSMUSG00000056228	ProperStrand	17	chr18	33954820	33954910	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	4	-18.2872
chr7	112895514	112895530	protein_coding	Tpp1	exon	ENSMUSG00000030894	NonProperStrand	25	chr8	129468776	129468817	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-6.1249
chr11	31258350	31258369	protein_coding	Stc2	utr3	ENSMUSG00000020303	ProperStrand	18	chr18	35716729	35716829	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.3552
chr2	90235299	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	27091218	27091234	protein_coding	4930444A02Rik	utr3	ENSMUSG00000037251	NonProperStrand	57	1	-4.5608
chr2	84886581	84886804	protein_coding	Ssrp1	exon	ENSMUSG00000027067	ProperStrand	118	chr6	120702688	120702742	protein_coding	Cecr2	exon	ENSMUSG00000071226	ProperStrand	39	1	-12.8226
chr2	91115975	91116057	protein_coding	Arfgap2	utr3	ENSMUSG00000027255	ProperStrand	7	chr4	131908809	131908878	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.0493
chr3	85943111	85943149	protein_coding	Rps3a	exon	ENSMUSG00000028081	ProperStrand	177	chr5	145563801	145563838	protein_coding	Trrap	exon	ENSMUSG00000045482	ProperStrand	399	1	-7.3597
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr4	56910492	56910618	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	4	-2.5641
chr5	42212573	42212589	protein_coding	Bod1l	exon	ENSMUSG00000061755	NonProperStrand	8	chr4	131908359	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-5.0428
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	22483460	22483476	protein_coding	Lhfpl3	intron	ENSMUSG00000058361	ProperStrand	14	1	-7.3487
chr17	85393731	85393845	protein_coding	Ppm1b	exon	ENSMUSG00000061130	ProperStrand	36	chr16	23110981	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.8249
chr2	90235292	90235338	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	108768640	108771013	protein_coding	Prmt7	exon	ENSMUSG00000060098	ProperStrand	43	1	-5.1055
chr11	119759963	119759979	protein_coding	Rptor	utr3	ENSMUSG00000025583	ProperStrand	76	chr10	90432659	90432681	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	1	-10.1437
chr1	98933649	98933739	LINE	L1Md_F2	L1	chr1L1Md_F298933167	ProperStrand	1	chr7	54441952	54442042	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-inf
chr19	30266998	30267017	SINE	RSINE1	B4	chr19RSINE130266915	NonProperStrand	1	chr1	71659189	71661944	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	1	-inf
chr8	75006770	75006827	protein_coding	Slc35e1	utr3	ENSMUSG00000019731	ProperStrand	23	chr1	162966000	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-5.4450
chr2	29925850	29926052	protein_coding	Set	exon	ENSMUSG00000054766	ProperStrand	167	chr8	32260335	32260373	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-2.7435
chr4	145685235	145695965	protein_coding	Gm13247	utr5	ENSMUSG00000056300	ProperStrand	10	chr10	23505152	23505203	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	6	-inf
chrX	39175916	39175946	protein_coding	Thoc2	exon	ENSMUSG00000037475	ProperStrand	30	chr4	116862584	116862663	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	4	-20.6249
chr15	36538385	36538451	protein_coding	Pabpc1	utr5	ENSMUSG00000022283	ProperStrand	908	chr5	65952377	65952395	protein_coding	Ube2k	intron	ENSMUSG00000029203	ProperStrand	289	1	-4.7958
chr2	79132657	79132674	protein_coding-noncoding	Itga4	utr5	ENSMUSG00000027009	NonProperStrand	118	chr11	6428060	6428160	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-3.6597
chr8	129458839	129469542	protein_coding	Tomm20	utr3	ENSMUSG00000058779	ProperStrand	55	chr16	23110848	23110969	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-0.9304
chr19	8799675	8799775	lincRNA	Snhg1	exon	ENSMUSG00000090867	ProperStrand	100	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.7641
chr7	26472435	26472451	protein_coding	Tgfb1	utr5	ENSMUSG00000002603	NonProperStrand	154	chr5	54389948	54389967	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	1	-8.8931
chr2	120167765	120168994	protein_coding	Vps39	exon	ENSMUSG00000027291	ProperStrand	24	chr8	73419657	73419694	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.8583
chr2	90235315	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	ProperStrand	24	chr9	120010005	120010024	LTR	MTC	MaLR	chr9MTC120009964	ProperStrand	1	1	-inf
chr7	113010679	113010711	antisense	Gm15645	.	ENSMUSG00000086414	NonProperStrand	1	chr7	116664792	116664882	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-inf
chr9	19462219	19462299	LINE	L1Md_A	L1	chr9L1Md_A19461964	NonProperStrand	28	chr7	54442412	54442502	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-11.2692
chr11	69482235	69482649	protein_coding	Eif4a1	exon	ENSMUSG00000059796	ProperStrand	108	chr2	158205275	158205355	snoRNA	ENSMUSG00000064585_SNORA71	.	ENSMUSG00000064585	ProperStrand	418	1	-8.2496
chr8	74844065	74845013	protein_coding	Klf2	exon	ENSMUSG00000055148	ProperStrand	82	chr16	23111372	23111462	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-4.2057
chr14	105543420	105543490	protein_coding	Rbm26	exon	ENSMUSG00000022119	ProperStrand	60	chr7	29136534	29136624	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	4	-8.6746
chr19	47716513	47716579	protein_coding	Slk	exon	ENSMUSG00000025060	ProperStrand	27	chr1	173433204	173433273	protein_coding	B930036N10Rik	utr3	ENSMUSG00000091993	ProperStrand	150	1	-13.0914
chr4	133522680	133522735	protein_coding-noncoding	Hmgn2	utr3	ENSMUSG00000003038	ProperStrand	1	chr10	23505166	23505204	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-inf
chr7	29105072	29105127	protein_coding	Supt5h	exon	ENSMUSG00000003435	ProperStrand	123	chr16	23111743	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	6	-7.4980
chr12	109373433	109373533	protein_coding	Setd3	intron	ENSMUSG00000056770	ProperStrand	21	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-5.6139
chr10	75100830	75100922	protein_coding	Susd2	exon	ENSMUSG00000006342	ProperStrand	16	chr9	15119678	15119714	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.1098
chr15	80365066	80365083	protein_coding	Enthd1	exon	ENSMUSG00000050439	NonProperStrand	5	chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	1	-13.7543
chr12	60141418	60141509	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	chr2	91436228	91436261	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-1.5203
chr11	88880419	88880435	protein_coding	Trim25	utr3	ENSMUSG00000000275	NonProperStrand	1	chr7	27972053	27972160	protein_coding	Snrpa	utr3	ENSMUSG00000061479	ProperStrand	56	1	-inf
chr2	30172056	30172717	protein_coding	Nup188	exon	ENSMUSG00000052533	ProperStrand	96	chr10	127521219	127521271	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	5	-inf
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr7	52714021	52714495	protein_coding	Ftl1	exon	ENSMUSG00000050708	ProperStrand	807	1	-2.0769
chr5	121890380	121890470	protein_coding	Naa25	utr3	ENSMUSG00000042719	ProperStrand	95	chr7	116664841	116664921	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.7944
chr10	92924081	92924130	protein_coding	Lta4h	exon	ENSMUSG00000015889	ProperStrand	12	chr7	117190000	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-6.4655
chr17	31251087	31251187	protein_coding	Abcg1	exon	ENSMUSG00000024030	ProperStrand	36	chr18	33954918	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-4.4678
chr11	69482363	69482406	snoRNA	ENSMUSG00000089542_snoU6-77	.	ENSMUSG00000089542	ProperStrand	138	chr17	35089182	35089235	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-3.8908
chr17	45730333	45736463	protein_coding	Slc29a1	utr5	ENSMUSG00000023942	ProperStrand	95	chr9	120039559	120039639	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.5059
chr14	124026090	124026107	protein_coding	Nalcn	utr5	ENSMUSG00000000197	NonProperStrand	12	chr16	23111389	23111448	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-6.8529
chrX	7515049	7515080	protein_coding	Hdac6	exon	ENSMUSG00000031161	ProperStrand	42	chrX	108697519	108697537	protein_coding	Hdx	intron	ENSMUSG00000034551	ProperStrand	5	1	-18.4417
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr5	145532202	145532266	protein_coding	Trrap	intron	ENSMUSG00000045482	ProperStrand	399	2	-4.8415
chr17	31640574	31640590	protein_coding	Wdr4	exon	ENSMUSG00000024037	NonProperStrand	18	chr16	23111386	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.2408
chr17	88382824	88382924	protein_coding	Msh6	exon	ENSMUSG00000005370	ProperStrand	150	chr11	77995191	77995254	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-4.4056
chr4	136133098	136137984	protein_coding	Kdm1a	exon	ENSMUSG00000036940	ProperStrand	83	chr18	75819987	75820004	protein_coding	Ctif	intron	ENSMUSG00000052928	ProperStrand	41	2	-19.6397
chrX	148348746	148348836	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	chr10	39978376	39978456	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	2	-3.0481
chr7	29136088	29137234	protein_coding	Rps16	exon	ENSMUSG00000037563	ProperStrand	191	chr16	23111740	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	6	-5.0161
chr11	74133384	74133414	rRNA	n-R5s71	.	ENSMUSG00000070178	NonProperStrand	2	chr19	8800382	8800472	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	NonProperStrand	18	1	-21.6032
chr6	28836611	28838088	protein_coding	Snd1	exon	ENSMUSG00000001424	NonProperStrand	14	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-4.0210
chr11	76335908	76335924	protein_coding	Abr	intron	ENSMUSG00000017631	NonProperStrand	8	chr14	76247753	76247801	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-8.2107
chr15	11140180	11140198	protein_coding	Adamts12	intron	ENSMUSG00000047497	ProperStrand	3	chr16	23110913	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr8	125093981	125094163	protein_coding	Cdt1	exon	ENSMUSG00000006585	ProperStrand	47	chr17	14025856	14025936	protein_coding	Mllt4	exon	ENSMUSG00000068036	ProperStrand	156	1	-11.8888
chr1	60079464	60079481	protein_coding	Ica1l	exon	ENSMUSG00000026018	ProperStrand	2	chr19	8799026	8799051	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-13.2620
chr6	51416218	51416337	protein_coding	Hnrnpa2b1	exon	ENSMUSG00000004980	ProperStrand	166	chr10	30552177	30552194	protein_coding	Hey2	utr3	ENSMUSG00000019789	NonProperStrand	4	2	-inf
chr11	62416574	62416619	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr14	55305282	55305299	protein_coding	1700123O20Rik	utr5	ENSMUSG00000040822	ProperStrand	2	1	-16.4879
chr4	127925754	127925771	protein_coding	Csmd2	intron	ENSMUSG00000028804	NonProperStrand	34	chr6	115757992	115758120	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-6.5936
chr11	95824664	95824754	protein_coding	Igf2bp1	utr3	ENSMUSG00000013415	ProperStrand	140	chr9	120039585	120039665	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.8690
chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	chrX	34622958	34623023	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-1.8958
chr11	30037297	30037397	protein_coding	Spnb2	exon	ENSMUSG00000020315	ProperStrand	103	chr14	41807909	41811002	protein_coding	5730469M10Rik	exon	ENSMUSG00000021792	ProperStrand	4	1	-17.8669
chr4	149026816	149026832	protein_coding	Pik3cd	exon	ENSMUSG00000039936	ProperStrand	151	chr17	35089181	35089232	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-3.7236
chr11	43287811	43287829	protein_coding	C1qtnf2	exon	ENSMUSG00000046491	NonProperStrand	2	chr18	35716762	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-9.2832
chr1	162966812	162966871	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	chr18	35714144	35714290	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	20	-6.9604
chr15	82683646	82683710	protein_coding	Tcf20	exon	ENSMUSG00000041852	ProperStrand	658	chr4	124736325	124736344	protein_coding	Dnali1	exon	ENSMUSG00000042707	ProperStrand	45	1	-9.1000
mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr8	46439259	46439275	protein_coding	Fam149a	exon	ENSMUSG00000070044	ProperStrand	57	1	-6.0045
chr1	187028206	187028223	protein_coding	Rab3gap2	exon	ENSMUSG00000039318	ProperStrand	41	chr15	79908931	79908984	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-6.2220
chr17	34704602	34704622	protein_coding	Notch4	exon	ENSMUSG00000015468	ProperStrand	11	chr5	116013494	116013567	protein_coding	Rplp0	utr3	ENSMUSG00000067274	ProperStrand	291	1	-13.6144
chr10	126501127	126501232	protein_coding	Cdk4	utr5	ENSMUSG00000006728	ProperStrand	47	chr19	8800441	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-3.9853
chr19	12643491	12643581	protein_coding	Fam111a	intron	ENSMUSG00000024691	ProperStrand	2	chr1	21285729	21285819	protein_coding	Gm4956	intron	ENSMUSG00000025936	ProperStrand	1	1	-inf
chr14	32000888	32001889	protein_coding	Nisch	exon	ENSMUSG00000021910	ProperStrand	125	chr10	90581049	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	4	-11.4511
chr11	52666351	52666367	protein_coding	Fstl4	intron	ENSMUSG00000036264	ProperStrand	27	chr6	115755649	115755696	protein_coding	Rpl32	exon	ENSMUSG00000057841	ProperStrand	137	1	-13.2720
chr13	38039316	38039406	protein_coding	Rreb1	exon	ENSMUSG00000039087	ProperStrand	33	chr7	116664819	116664899	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.6237
chrX	71517861	71517951	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	chr3	95980313	95980407	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	4	-4.2603
chr8	121597319	121597337	protein_coding	Cdh13	intron	ENSMUSG00000031841	ProperStrand	60	chr3	68889071	68889131	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-3.2568
chr18	24760123	24761840	protein_coding	Slc39a6	utr5	ENSMUSG00000024270	ProperStrand	16	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-7.8380
chr6	122679795	122679880	protein_coding	Slc2a3	utr3	ENSMUSG00000003153	ProperStrand	682	chr1	162966830	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-1.8073
chr8	13416895	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr19	8963024	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	28	-5.3932
chr9	78215804	78215878	protein_coding	Dppa5a	exon	ENSMUSG00000060461	ProperStrand	79	chr7	116663731	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	7	-15.2931
chr7	13516168	13516204	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr4	63389602	63389618	protein_coding	Tnfsf15	utr3	ENSMUSG00000050395	NonProperStrand	121	1	-7.2677
chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	chr15	80711234	80711284	protein_coding	Tnrc6b	exon	ENSMUSG00000047888	ProperStrand	59	1	-10.5100
chr17	33820544	33820561	protein_coding	Hnrnpm	intron	ENSMUSG00000059208	ProperStrand	56	chr16	23111756	23111813	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.0136
chr8	112527416	112527496	LINE	L1MB8	L1	chr8L1MB8112527293	NonProperStrand	1	chr8	112526928	112527018	SINE	B3	B2	chr8B3112526930	NonProperStrand	1	1	-inf
chr2	105012751	105012769	protein_coding	Wt1	utr3	ENSMUSG00000016458	NonProperStrand	338	chr19	7096579	7096773	protein_coding	Stip1	exon	ENSMUSG00000024966	ProperStrand	100	1	-8.8259
chr12	60141322	60141402	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	chr12	88778631	88778721	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-0.8515
chr7	3658288	3658321	protein_coding	Rps9	exon	ENSMUSG00000006333	ProperStrand	87	chr11	97642996	97643086	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.8614
chr2	147009105	147009122	protein_coding	Nkx2-2	utr3	ENSMUSG00000027434	NonProperStrand	84	chr5	108336363	108336457	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-4.2373
chr2	90387163	90387181	protein_coding	Ptprj	intron	ENSMUSG00000025314	NonProperStrand	4	chr4	131865855	131865901	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.0048
chr2	152310907	152310924	SINE	PB1D10	Alu	chr2PB1D10152310876	NonProperStrand	1	chr11	6428108	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-inf
chr11	54331133	54331173	protein_coding	Fnip1	utr3	ENSMUSG00000035992	ProperStrand	16	chr16	23111704	23111811	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.2713
chr11	78214290	78214307	antisense	Gm11194	.	ENSMUSG00000085747	ProperStrand	35	chr9	120039585	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-4.3274
chr1	136489923	136490023	protein_coding	Kdm5b	utr5	ENSMUSG00000042207	ProperStrand	223	chr7	38973644	38973667	protein_coding	1600014C10Rik	exon	ENSMUSG00000054676	ProperStrand	635	3	-13.7544
chr7	74573832	74573851	LINE	L1M4	L1	chr7L1M474573720	NonProperStrand	1	chr2	172759405	172759424	protein_coding	Bmp7	intron	ENSMUSG00000008999	NonProperStrand	10	1	-inf
chr11	62418013	62418030	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr19	8798756	8798825	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-1.1062
chr14	99712256	99712315	protein_coding	Klf5	intron	ENSMUSG00000005148	ProperStrand	39	chr17	88077661	88077677	protein_coding	Msh2	exon	ENSMUSG00000024151	ProperStrand	124	1	-12.7252
chr7	105310561	105310577	protein_coding	Capn5	exon	ENSMUSG00000035547	ProperStrand	99	chr10	112365984	112366002	protein_coding	Atxn7l3b	utr5	ENSMUSG00000074748	ProperStrand	18	1	-14.7570
chr12	17552949	17553030	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr19	8799410	8799433	snoRNA	ENSMUSG00000065280_SNORD28	.	ENSMUSG00000065280	ProperStrand	269	2	-4.1406
chr2	52905462	52905481	protein_coding	Fmnl2	intron	ENSMUSG00000036053	NonProperStrand	4	chr17	66729041	66729099	protein_coding	1110012J17Rik	exon	ENSMUSG00000052105	ProperStrand	60	1	-19.5074
chr10	127521124	127521388	protein_coding	Atp5b	exon	ENSMUSG00000025393	NonProperStrand	9	chr16	23111688	23111788	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	NonProperStrand	47	2	-inf
chr16	36561883	36561901	protein_coding	Casr	intron	ENSMUSG00000051980	NonProperStrand	2	chr17	24665447	24665467	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-12.3390
chr7	64846601	64846619	protein_coding	Gabrb3	utr5	ENSMUSG00000033676	NonProperStrand	4	chr4	63211296	63211313	protein_coding	Atp6v1g1	utr3	ENSMUSG00000039105	NonProperStrand	24	1	-20.7136
chr2	90235296	90235346	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr15	88830463	88830548	protein_coding	Mov10l1	intron	ENSMUSG00000015365	ProperStrand	22	2	-10.4561
chr7	152050036	152050090	protein_coding	Fgf4	utr3	ENSMUSG00000050917	ProperStrand	66	chr3	95980313	95980341	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-6.6685
chr17	35643009	35643064	protein_coding	Pou5f1	utr5	ENSMUSG00000024406	ProperStrand	104	chr18	33954827	33954897	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-4.4429
chr6	149283952	149283969	protein_coding	2810474O19Rik	utr3	ENSMUSG00000032712	ProperStrand	70	chr2	22444876	22444945	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	5	-inf
chr1	120355715	120355799	snRNA	ENSMUSG00000080542_U4atac	.	ENSMUSG00000080542	ProperStrand	73	chr18	35714160	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-5.3200
chr4	41686237	41686327	protein_coding	Sigmar1	exon	ENSMUSG00000036078	ProperStrand	11	chr2	166395934	166395952	protein_coding	Prex1	exon	ENSMUSG00000039621	ProperStrand	20	1	-18.9599
chr5	106307787	106307806	protein_coding	Zfp326	exon	ENSMUSG00000029290	ProperStrand	29	chr4	126559848	126566767	protein_coding	Zmym4	exon	ENSMUSG00000042446	ProperStrand	94	1	-13.8781
chr1	173341933	173341949	protein_coding	Usf1	utr5	ENSMUSG00000026641	NonProperStrand	144	chr9	59519429	59519467	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	1	-5.4547
chr17	95160908	95218242	protein_coding	2610044O15Rik	exon	ENSMUSG00000066057	NonProperStrand	70	chr4	131908687	131908787	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-2.0219
chr12	81284431	81284531	protein_coding	Actn1	exon	ENSMUSG00000015143	ProperStrand	128	chr10	118645203	118645222	protein_coding	Cand1	exon	ENSMUSG00000020114	ProperStrand	76	1	-11.3166
chr17	27889681	27889727	protein_coding	D17Wsu92e	utr3	ENSMUSG00000056692	ProperStrand	61	chr7	148634702	148634792	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-3.9550
chr17	33682513	33682530	protein_coding	Adamts10	exon	ENSMUSG00000024299	ProperStrand	5	chr10	96081319	96081383	protein_coding	Btg1	utr3	ENSMUSG00000036478	ProperStrand	21	1	-18.9639
chr17	32280750	32281128	protein_coding	Notch3	exon	ENSMUSG00000038146	ProperStrand	181	chr11	69483136	69483231	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-2.7828
chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	chr9	103267781	103267862	protein_coding	Cdv3	utr5	ENSMUSG00000032803	ProperStrand	68	1	-9.0188
chr1	176764802	176764818	protein_coding	Grem2	utr3	ENSMUSG00000050069	ProperStrand	24	chr16	23111447	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-4.7906
chr10	80291078	80291246	protein_coding	Oaz1	exon	ENSMUSG00000035242	ProperStrand	49	chr7	116664794	116664926	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	10	-inf
chrX	132673816	132673833	protein_coding	Bex4	intron	ENSMUSG00000047844	NonProperStrand	70	chr5	108334191	108334281	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-4.5239
chr17	13811726	13811811	protein_coding	Tcte2	intron	ENSMUSG00000038347	ProperStrand	21	chr2	130103751	130103782	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-10.5941
chr8	69502675	69502755	LINE	Lx7	L1	chr8Lx769502521	ProperStrand	1	chr8	70403452	70403542	protein_coding	Psd3	intron	ENSMUSG00000030465	NonProperStrand	9	1	-inf
chr2	61892317	61892334	protein_coding	Slc4a10	intron	ENSMUSG00000026904	ProperStrand	40	chr6	70794801	70794819	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	2	-19.2759
chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	chrX	84483696	84483732	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	2	-6.8626
chrX	34622664	34622744	protein_coding	Rpl39	utr3	ENSMUSG00000079641	ProperStrand	37	chr18	35714155	35714245	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.3503
chr7	109118574	109118664	protein_coding	Numa1	intron	ENSMUSG00000066306	ProperStrand	148	chr3	123210861	123210941	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-0.7988
chr1	34246402	34246463	protein_coding	Dst	utr5	ENSMUSG00000026131	ProperStrand	461	chrX	71517869	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-2.6929
chr7	119785308	119785329	lincRNA	2310014F06Rik	intron	ENSMUSG00000085945	NonProperStrand	25	mmu-miR-6238	2	19	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	1	-12.3059
chr7	34992750	34992767	protein_coding	Gpi1	exon	ENSMUSG00000036427	NonProperStrand	40	chr6	71832629	71832687	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-6.4109
chr17	34808541	34808558	protein_coding	Tnxb	exon	ENSMUSG00000033327	ProperStrand	36	chr7	35014006	35014339	protein_coding	Gpi1	exon	ENSMUSG00000036427	ProperStrand	288	1	-11.2001
chr14	21320295	21320323	protein_coding	Ppp3cb	utr3	ENSMUSG00000021816	ProperStrand	17	chr10	25726587	25726603	protein_coding	Tmem200a	intron	ENSMUSG00000092001	ProperStrand	19	1	-18.1299
chr2	71247117	71248283	protein_coding	Hat1	exon	ENSMUSG00000027018	ProperStrand	53	chr11	97642992	97643082	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.6858
chr16	8645822	8645847	protein_coding	Pmm2	intron	ENSMUSG00000022711	ProperStrand	12	chr11	69481383	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-6.3220
chr7	148448525	148448556	protein_coding	Phrf1	utr3	ENSMUSG00000038611	ProperStrand	86	chr10	23505241	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-1.6109
chr5	115795888	115798596	protein_coding	Cox6a1	exon	ENSMUSG00000041697	ProperStrand	38	chr5	74489595	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	9	-20.8318
chr2	29917649	29917682	protein_coding	Set	utr5	ENSMUSG00000054766	ProperStrand	167	chr10	110918642	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-1.7067
chr7	130544017	130544033	protein_coding	Lcmt1	exon	ENSMUSG00000030763	ProperStrand	18	chr15	34370601	34370673	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-9.6350
chr19	29192806	29195775	protein_coding	Rcl1	exon	ENSMUSG00000024785	ProperStrand	14	chr16	23110829	23110884	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.2008
chr11	98868783	98868802	protein_coding	Top2a	intron	ENSMUSG00000020914	ProperStrand	324	chr2	145077957	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-4.4249
chr10	59754425	59754443	protein_coding	Psap	exon	ENSMUSG00000004207	ProperStrand	124	chr7	117189933	117190025	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-3.7306
chr4	122970456	122970526	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	chr2	130101241	130101264	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	5	-7.2879
chr17	38290745	38290764	LTR	MurERV4-int	ERVK	chr17MurERV4-int38290059	ProperStrand	21	chr7	57041565	57041581	protein_coding	Prmt3	exon	ENSMUSG00000030505	ProperStrand	89	1	-14.6496
chr11	86133185	86133202	protein_coding	Med13	exon	ENSMUSG00000034297	ProperStrand	23	chr5	108332396	108332731	protein_coding	Rpl5	exon	ENSMUSG00000058558	ProperStrand	235	1	-12.5167
chr10	5634068	5634084	protein_coding	Esr1	exon	ENSMUSG00000019768	NonProperStrand	24	chr4	131865867	131865904	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.3401
chr1	52276854	52276875	protein_coding	Gls	exon	ENSMUSG00000026103	ProperStrand	56	chr15	34370545	34370617	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-6.2337
chr9	30959949	30961065	protein_coding	Aplp2	exon	ENSMUSG00000031996	ProperStrand	172	chr11	69483188	69483278	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	6	-7.4519
chr11	119207004	119207020	protein_coding	Sgsh	utr3	ENSMUSG00000005043	ProperStrand	67	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.5997
chr15	78370653	78370670	protein_coding	Sstr3	exon	ENSMUSG00000044933	NonProperStrand	17	chr8	73419683	73419743	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-5.5405
chr10	80785490	80785506	protein_coding	2510012J08Rik	exon	ENSMUSG00000034889	ProperStrand	16	chr17	35088961	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-8.5211
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	4	-11.8106
chr8	124406208	124406254	protein_coding	Slc7a5	utr3	ENSMUSG00000040010	ProperStrand	166	chrX	34622906	34622934	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-1.4873
chr6	54593730	54593826	protein_coding	Plekha8	utr3	ENSMUSG00000005225	ProperStrand	21	chr18	35714240	35714290	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-5.4554
chr12	81275623	81275641	protein_coding	Actn1	intron	ENSMUSG00000015143	ProperStrand	128	chr8	13876125	13876215	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-5.6499
chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr9	40612846	40612922	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	2	-1.1238
chr15	44504363	44504383	protein_coding	Sybu	exon	ENSMUSG00000022340	NonProperStrand	28	chr11	62416601	62416654	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-6.6707
chr15	95803540	95803630	protein_coding	Ano6	utr3	ENSMUSG00000064210	ProperStrand	39	chr4	131908691	131908771	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.8599
chr10	90324049	90324065	protein_coding	Anks1b	intron	ENSMUSG00000058589	NonProperStrand	230	chr8	13876096	13876173	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-4.5199
chr8	80082805	80082841	protein_coding	Prmt10	exon	ENSMUSG00000037134	ProperStrand	14	chr1	162966813	162966856	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	2	-14.6637
chr5	116010764	116010793	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	chr4	131866171	131866261	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-1.0887
chr6	118333628	118333707	protein_coding	Bms1	utr3	ENSMUSG00000030138	ProperStrand	107	chr3	89930456	89930534	snoRNA	ENSMUSG00000064930_SNORA41	.	ENSMUSG00000064930	ProperStrand	7	1	-16.6449
chrX	160738256	160738279	protein_coding	Pir	exon	ENSMUSG00000031379	ProperStrand	2	chr19	8963085	8963175	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-9.4105
chr4	132751850	132751901	protein_coding	Wasf2	utr3	ENSMUSG00000028868	ProperStrand	56	chrX	158274965	158274981	protein_coding	Nhs	exon	ENSMUSG00000059493	NonProperStrand	50	1	-13.8186
chr5	23913253	23914428	protein_coding	Abcb8	exon	ENSMUSG00000028973	ProperStrand	4	chr5	108334226	108334316	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-10.4241
chr10	10439853	10439870	protein_coding	Grm1	exon	ENSMUSG00000019828	NonProperStrand	17	chr4	131908356	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.5556
chrX	72214248	72214264	protein_coding-noncoding	Gab3	utr3	ENSMUSG00000032750	ProperStrand	420	chrX	84483704	84483732	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-4.4348
chr7	52713907	52713960	protein_coding	Ftl1	exon	ENSMUSG00000050708	ProperStrand	807	chr13	76341035	76341055	protein_coding	Fam81b	intron	ENSMUSG00000078966	NonProperStrand	220	1	-5.5498
chr9	64024467	64024549	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	chr4	122970440	122970529	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-2.7032
chr6	34110516	34111718	protein_coding	Slc35b4	exon	ENSMUSG00000018999	ProperStrand	11	chr16	23110949	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.6241
chr13	104613417	104613433	protein_coding	Erbb2ip	exon	ENSMUSG00000021709	ProperStrand	21	chr3	27235065	27235093	protein_coding	Tnfsf10	utr3	ENSMUSG00000039304	ProperStrand	18	2	-20.8725
chr17	45656704	45656760	protein_coding	Aars2	exon	ENSMUSG00000023938	ProperStrand	14	chr16	23110530	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.1866
chr7	52958453	52958469	protein_coding	Car11	exon	ENSMUSG00000003273	NonProperStrand	250	chr1	89673512	89673591	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-1.0021
chr17	29475697	29476782	protein_coding	Mtch1	exon	ENSMUSG00000024012	ProperStrand	13	chr1	88247743	88247766	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-8.1588
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr10	110918549	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	4	-2.9675
chr7	74189892	74189909	protein_coding	Adamts17	intron	ENSMUSG00000058145	NonProperStrand	73	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-6.2036
chr2	156122464	156124270	protein_coding	Phf20	exon	ENSMUSG00000038116	ProperStrand	60	chr19	8800429	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-3.5299
chrX	98743722	98743789	protein_coding	Taf1	exon	ENSMUSG00000031314	ProperStrand	61	chr1	39605591	39605633	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	3	-16.4620
chr8	125416827	125416844	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	chr3	144748059	144749264	protein_coding	Clca5	exon	ENSMUSG00000036960	ProperStrand	86	1	-8.8942
chr10	62801657	62801755	protein_coding	Sirt1	utr5	ENSMUSG00000020063	ProperStrand	7	chr7	88226819	88226853	protein_coding	Alpk3	intron	ENSMUSG00000038763	ProperStrand	17	1	-20.3967
chr19	3873978	3874058	protein_coding	Chka	intron	ENSMUSG00000024843	ProperStrand	17	chr1	187073816	187074819	protein_coding	Rab3gap2	exon	ENSMUSG00000039318	ProperStrand	41	1	-16.6806
chr7	146684407	146684425	protein_coding	Inpp5a	intron	ENSMUSG00000025477	ProperStrand	166	chr11	69483194	69483237	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-0.9352
chr6	33238906	33238934	protein_coding	Exoc4	intron	ENSMUSG00000029763	ProperStrand	120	chr11	86114207	86114250	protein_coding	Med13	exon	ENSMUSG00000034297	ProperStrand	23	2	-19.6199
chr2	33286308	33286343	protein_coding	Zbtb34	intron	ENSMUSG00000068966	ProperStrand	9	chrX	34622906	34622964	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-6.8852
chr9	70626645	70626661	protein_coding	Adam10	utr3	ENSMUSG00000054693	ProperStrand	12	chr16	23110960	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-4.4633
chr14	21512385	21512892	protein_coding	Sec24c	exon	ENSMUSG00000039367	ProperStrand	60	chr14	76247740	76247820	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-4.1720
chr2	125586105	125586131	protein_coding	Secisbp2l	exon	ENSMUSG00000035093	ProperStrand	26	chr19	8798490	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-11.0987
chr15	12808543	12811401	protein_coding	Drosha	exon	ENSMUSG00000022191	ProperStrand	163	chr10	110918615	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	5	-8.9815
chr4	83241429	83241447	protein_coding	4930473A06Rik	intron	ENSMUSG00000052407	ProperStrand	19	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.7782
chr11	119960316	119960332	protein_coding	1810043H04Rik	exon	ENSMUSG00000078572	ProperStrand	12	chr15	79908932	79908955	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-8.7110
chr14	81889479	81889497	LINE	Lx2B	L1	chr14Lx2B81887200	ProperStrand	1	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr18	65315336	65317522	protein_coding	Nedd4l	exon	ENSMUSG00000024589	ProperStrand	44	chr16	38158132	38158212	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	2	-14.7053
chr18	10743320	10743344	protein_coding	Mib1	exon	ENSMUSG00000024294	ProperStrand	27	chr11	101466286	101466348	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	1	-10.4836
chr18	42492918	42493008	protein_coding	Rbm27	exon	ENSMUSG00000024491	ProperStrand	38	chr16	23111418	23111498	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.9421
chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-7.3356
chr11	72224921	72225021	protein_coding	Smtnl2	exon	ENSMUSG00000045667	ProperStrand	30	chr4	131908689	131908748	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-11.1789
chr17	24856731	24856775	antisense	Snhg9	.	ENSMUSG00000090101	ProperStrand	218	chr16	20684360	20684384	snoRNA	ENSMUSG00000077239_Snord66	.	ENSMUSG00000077239	ProperStrand	159	2	-13.9227
chr5	141234981	141235081	protein_coding	Gna12	utr3	ENSMUSG00000000149	ProperStrand	54	chr7	29136628	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.5445
chr2	29666756	29666856	protein_coding	Slc27a4	exon	ENSMUSG00000059316	ProperStrand	24	chr11	62416606	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-6.9803
chr11	5029055	5029432	protein_coding	Emid1	exon	ENSMUSG00000034164	ProperStrand	14	chr8	27093114	27093214	protein_coding	4930444A02Rik	utr3	ENSMUSG00000037251	ProperStrand	4	1	-inf
chr7	54044977	54045057	protein_coding	Hps5	intron	ENSMUSG00000014418	ProperStrand	3	chr1	164345933	164346023	protein_coding	Dnm3	intron	ENSMUSG00000040265	ProperStrand	11	1	-20.0073
chr12	71347267	71347283	protein_coding	Trim9	utr3	ENSMUSG00000021071	NonProperStrand	75	chr4	131865855	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.4339
chr11	78313939	78313956	protein_coding	Vtn	exon	ENSMUSG00000017344	ProperStrand	188	chr10	87938133	87938149	protein_coding	Chpt1	utr3	ENSMUSG00000060002	ProperStrand	15	1	-13.8435
chr7	143781768	143781784	LINE	Lx9	L1	chr7Lx9143781715	ProperStrand	23	chr1	34275333	34275408	protein_coding	Dst	utr5	ENSMUSG00000026131	ProperStrand	461	1	-11.1700
chr5	64203925	64203942	protein_coding	0610040J01Rik	intron	ENSMUSG00000060512	ProperStrand	36	chr19	8799581	8799640	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-7.7866
chr2	72243878	72243894	protein_coding	B230120H23Rik	utr3	ENSMUSG00000004085	NonProperStrand	26	chr13	38437929	38437946	protein_coding	Bmp6	utr5	ENSMUSG00000039004	ProperStrand	21	1	-16.9793
chr11	97698382	97698472	protein_coding	Lasp1	utr3	ENSMUSG00000038366	ProperStrand	65	chr15	34370597	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-3.4021
chr7	36388906	36389233	protein_coding	Ankrd27	exon	ENSMUSG00000034867	ProperStrand	132	chr10	90581241	90581269	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-3.3269
chr9	78023119	78023149	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr4	43594484	43595735	protein_coding	Rgp1	exon	ENSMUSG00000028468	ProperStrand	22	1	-7.8816
chr8	108194196	108194248	protein_coding	Ctcf	exon	ENSMUSG00000005698	ProperStrand	75	chr1	162966817	162966869	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	2	-9.4827
chr4	99659446	99659475	protein_coding	Pgm2	utr3	ENSMUSG00000025791	ProperStrand	43	chr19	8799054	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-6.4907
chr4	131788001	131788029	protein_coding	Gmeb1	exon	ENSMUSG00000028901	ProperStrand	15	chr9	120039538	120039628	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-5.9962
chr4	107596083	107596100	protein_coding	Cpt2	utr5	ENSMUSG00000028607	NonProperStrand	106	chr9	70298116	70298188	protein_coding	Rnf111	exon	ENSMUSG00000032217	ProperStrand	33	1	-13.3783
chr12	103242498	103242550	protein_coding	Cpsf2	utr3	ENSMUSG00000041781	ProperStrand	9	chr9	120039622	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	3	-16.3486
chr4	143006184	143006274	protein_coding	Pramef8	intron	ENSMUSG00000046862	ProperStrand	7	chr16	23110920	23111000	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.4785
chr1	71119368	71119388	protein_coding	Bard1	intron	ENSMUSG00000026196	ProperStrand	44	chr1	162965984	162966041	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-4.1851
chr1	88426323	88426547	protein_coding	Ptma	exon	ENSMUSG00000026238	ProperStrand	385	chr1	153636009	153636030	protein_coding	Edem3	intron	ENSMUSG00000043019	ProperStrand	84	1	-8.9153
chr4	43505651	43505713	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr5	100392816	100393023	protein_coding	Hnrnpd	exon	ENSMUSG00000000568	ProperStrand	33	2	-7.0202
chr4	138125348	138125364	protein_coding	Vwa5b1	exon	ENSMUSG00000028753	NonProperStrand	16	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-10.4162
chr10	87609724	87609814	protein_coding	Nup37	utr5	ENSMUSG00000035351	NonProperStrand	1	chr10	87609369	87609459	protein_coding	4930547N16Rik	utr5	ENSMUSG00000035365	ProperStrand	4	1	-inf
chr17	50329626	50329643	protein_coding	Rftn1	utr5	ENSMUSG00000039316	NonProperStrand	5	chr16	23111757	23111811	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-6.6731
chr17	35273061	35273135	protein_coding	Bag6	utr5	ENSMUSG00000024392	ProperStrand	181	chr2	91436235	91436259	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-5.3231
chr12	60774054	60774110	snoRNA	ENSMUSG00000077603_SNORA3	.	ENSMUSG00000077603	ProperStrand	185	chr10	110918551	110918641	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	3	-4.4917
chr7	144654673	144656111	protein_coding	Glrx3	exon	ENSMUSG00000031068	ProperStrand	35	chr10	23505162	23505252	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.0450
chr7	29678433	29692082	protein_coding	Actn4	utr3	ENSMUSG00000054808	ProperStrand	120	chr16	23111694	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-3.0194
chr9	123281098	123281182	protein_coding	Lars2	exon	ENSMUSG00000035202	ProperStrand	11	chr15	79913288	79913346	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-6.9253
chr9	78435767	78435784	protein_coding	Slc17a5	utr5	ENSMUSG00000049624	ProperStrand	6	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-6.1051
chr2	118572125	118572141	antisense	5430417L22Rik	.	ENSMUSG00000074918	NonProperStrand	4	chr2	75732196	75732245	protein_coding	Agps	utr3	ENSMUSG00000042410	ProperStrand	22	3	-21.8690
chr10	82111890	82111960	protein_coding	Tdg	utr3	ENSMUSG00000034674	ProperStrand	42	chr15	79913288	79913315	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.2623
chr16	23111376	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	chr19	12085581	12085606	tRNA	tRNA638-LeuTAA	.	19055	ProperStrand	9	1	-4.5836
chr11	19981539	19981573	protein_coding	Actr2	intron	ENSMUSG00000020152	ProperStrand	72	chr18	22965958	22965975	protein_coding	Nol4	intron	ENSMUSG00000041923	ProperStrand	17	1	-15.5058
chr2	30828495	30828512	protein_coding	BC005624	utr3	ENSMUSG00000026851	NonProperStrand	8	chr19	8963026	8963126	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	8	-inf
chr12	109726562	109740621	protein_coding	Eml1	exon	ENSMUSG00000058070	ProperStrand	10	chr11	97642989	97643069	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-5.8808
chr2	38859673	38859698	protein_coding	Rpl35	exon	ENSMUSG00000062997	ProperStrand	68	chr4	130305581	130305620	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	1	-9.6582
chr13	64465423	64465475	protein_coding	Ctsl	exon	ENSMUSG00000021477	ProperStrand	44	chr13	104902156	104902176	protein_coding	Sgtb	intron	ENSMUSG00000042743	ProperStrand	60	1	-13.9416
chr10	126963041	126963141	protein_coding	Nxph4	utr3	ENSMUSG00000040258	ProperStrand	8	chr1	63225677	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-10.7847
chr5	55101775	55101865	LINE	L1MB8	L1	chr5L1MB855101701	NonProperStrand	1	chr5	55101238	55101318	SINE	B3	B2	chr5B355101253	ProperStrand	1	1	-inf
chr19	8799022	8799092	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	chr11	62416951	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	4	-1.6466
chr8	41393567	41393586	protein_coding	Efha2	exon	ENSMUSG00000039478	ProperStrand	5	chr5	121655096	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-8.7807
chr11	69493878	69493946	protein_coding	Senp3	utr5	ENSMUSG00000005204	ProperStrand	65	chr16	23110556	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.3262
chr5	102281249	102281303	protein_coding	Wdfy3	utr3	ENSMUSG00000043940	ProperStrand	45	chr18	35716765	35716855	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.6579
chr17	29400959	29400976	protein_coding	Ppil1	utr5	ENSMUSG00000024007	ProperStrand	17	chr14	100374081	100374157	protein_coding	Klf12	intron	ENSMUSG00000072294	ProperStrand	14	1	-22.5166
chr6	106734419	106740846	protein_coding	Crbn	exon	ENSMUSG00000005362	ProperStrand	7	chr7	120039798	120039852	protein_coding	Tead1	intron	ENSMUSG00000055320	ProperStrand	217	1	-15.1644
chr16	57391626	57391774	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr18	73693110	73693191	rRNA	n-R5-8s1	.	ENSMUSG00000065922	NonProperStrand	5	2	-20.2441
chr6	30687388	30687407	protein_coding	Mest	intron	ENSMUSG00000051855	ProperStrand	11	chr2	63936034	63936052	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-11.3168
chr9	15119979	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	chr11	77995190	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-0.9153
chr11	77996558	77996609	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	chr16	18240876	18240937	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	1	-2.2129
chr1	182824356	182824456	protein_coding	Lefty2	exon	ENSMUSG00000066652	ProperStrand	48	chr11	97642972	97643013	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.8600
chr3	156224612	156224628	lincRNA	4930570G19Rik	exon	ENSMUSG00000085084	ProperStrand	326	chr11	83755782	83755799	protein_coding	Ddx52	intron	ENSMUSG00000020677	NonProperStrand	5	1	-15.0976
chr6	51413439	51413455	protein_coding	Hnrnpa2b1	exon	ENSMUSG00000004980	ProperStrand	166	chr7	109789611	109789627	protein_coding	Olfr554	exon	ENSMUSG00000073971	NonProperStrand	66	1	-11.0797
chr1	45448521	45488620	protein_coding	Col5a2	exon	ENSMUSG00000026042	ProperStrand	184	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-4.1946
chr1	187115271	187115298	protein_coding	Iars2	exon	ENSMUSG00000026618	ProperStrand	68	chr6	115757992	115758119	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-5.2280
chr2	90235307	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr13	55105923	55105939	protein_coding	Unc5a	exon	ENSMUSG00000025876	NonProperStrand	96	1	-3.5798
chr2	65376282	65376298	protein_coding	Scn3a	intron	ENSMUSG00000057182	ProperStrand	26	chr7	17148528	17148594	protein_coding	Grlf1	exon	ENSMUSG00000058230	ProperStrand	38	1	-15.9392
chr1	95400055	95402126	protein_coding	Sept2	exon	ENSMUSG00000026276	ProperStrand	136	chr11	69481333	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	5	-9.2341
chr12	84145060	84145079	protein_coding	Rgs6	intron	ENSMUSG00000021219	ProperStrand	15	chr2	167434012	167434112	protein_coding	Gm20431	utr3	ENSMUSG00000089739	ProperStrand	81	1	-15.5399
chr19	23338241	23343254	protein_coding	Smc5	exon	ENSMUSG00000024943	ProperStrand	146	chr14	76247740	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	7	-17.4326
chrX	34335718	34335742	protein_coding	Slc25a5	utr5	ENSMUSG00000016319	ProperStrand	55	chr13	51743666	51743703	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-7.0331
chr18	80637783	80637820	protein_coding	Ctdp1	intron	ENSMUSG00000033323	ProperStrand	69	chr16	23110909	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-1.1561
chr1	183282762	183282779	protein_coding	Cnih3	utr5	ENSMUSG00000026514	NonProperStrand	32	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.4550
mmu-miR-6240	3	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr14	52817950	52818034	protein_coding	Chd8	utr3	ENSMUSG00000053754	ProperStrand	167	3	-9.5756
chr2	167293257	167294513	protein_coding	Slc9a8	exon	ENSMUSG00000039463	ProperStrand	26	chr1	162967488	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-8.3830
chr16	92129319	92129399	LINE	L1MD2	L1	chr16L1MD292129307	NonProperStrand	1	chr16	92129112	92129202	LTR	MTC	MaLR	chr16MTC92129083	NonProperStrand	1	1	-inf
chr15	98782014	98783886	protein_coding	Tuba1a	exon	ENSMUSG00000072235	ProperStrand	17	chr16	23110902	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-3.4874
chr7	4744674	4745744	protein_coding	Rpl28	exon	ENSMUSG00000030432	ProperStrand	220	chr16	23110896	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	10	-1.2186
chr5	149113021	149113038	protein_coding	Mtus2	exon	ENSMUSG00000029651	ProperStrand	114	chr3	96073856	96073885	protein_coding	Hist2h2bb	exon	ENSMUSG00000050936	ProperStrand	57	1	-12.1274
chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	chr15	83188497	83188514	protein_coding	1700001L05Rik	utr3	ENSMUSG00000075511	ProperStrand	14	1	-12.2313
chr6	67221912	67221959	protein_coding	Serbp1	exon	ENSMUSG00000036371	ProperStrand	261	chr4	132394293	132394327	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	1	-6.2174
chr3	145311608	145311694	protein_coding	Cyr61	exon	ENSMUSG00000028195	ProperStrand	13	chr4	131865856	131865946	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.5141
chr8	74008400	74008417	protein_coding	Ano8	exon	ENSMUSG00000034863	NonProperStrand	171	chr4	122968584	122968660	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	2	-7.0953
chr7	24779190	24779213	SINE	ID_B1	B4	chr7ID_B124779183	NonProperStrand	54	chr13	54564913	54564929	protein_coding	Thoc3	exon	ENSMUSG00000025872	ProperStrand	24	1	-15.3777
chr7	109830472	109830488	protein_coding	Trim68	intron	ENSMUSG00000073968	ProperStrand	23	chr16	23110526	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.2122
chr10	70845059	70845149	protein_coding	Ipmk	utr3	ENSMUSG00000060733	ProperStrand	22	chr1	89681277	89681357	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-7.4365
chr19	54104436	54104462	protein_coding	Shoc2	exon	ENSMUSG00000024976	ProperStrand	5	chr15	81510803	81510821	protein_coding	Chadl	intron	ENSMUSG00000063765	ProperStrand	28	1	-19.2492
mmu-miR-1912-5p	0	17	miRNA	mmu-miR-1912-5p	.	mmu-miR-1912-5p	NonProperStrand	36	chr1	120574268	120574329	protein_coding	Tfcp2l1	utr3	ENSMUSG00000026380	ProperStrand	158	2	-19.1110
chr4	43505656	43505721	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr13	38593465	38593510	protein_coding	Txndc5	exon	ENSMUSG00000038991	ProperStrand	48	3	-8.6841
chr9	65887843	65887897	protein_coding	Csnk1g1	utr3	ENSMUSG00000032384	ProperStrand	31	chr4	131865868	131865958	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.8751
chr10	79322213	79322382	protein_coding	Ptbp1	exon	ENSMUSG00000006498	ProperStrand	129	chr9	15119646	15119726	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.4080
chr7	142364631	142364647	protein_coding	Dock1	utr3	ENSMUSG00000058325	NonProperStrand	18	chr17	35089182	35089234	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-7.8895
chr17	48012840	48014147	protein_coding	Foxp4	exon	ENSMUSG00000023991	ProperStrand	27	chr4	131908267	131908347	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	8	-20.2627
chr2	4974190	4974207	protein_coding	Optn	exon	ENSMUSG00000026672	ProperStrand	451	chr15	101914696	101914763	protein_coding	Eif4b	exon	ENSMUSG00000058655	ProperStrand	484	1	-5.1490
chr9	64022854	64022923	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	chr5	108334204	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	4	-3.1581
chr2	146125208	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	chr15	79913288	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-1.6784
chr1	108676605	108676637	protein_coding	Vps4b	exon	ENSMUSG00000009907	ProperStrand	29	chr9	61772793	61772834	protein_coding	Kif23	exon	ENSMUSG00000032254	ProperStrand	41	1	-15.5697
chrX	7310582	7310619	protein_coding	Ccdc120	exon	ENSMUSG00000031150	ProperStrand	9	chr2	18508668	18508696	tRNA	tRNA1947-AsnGTT	.	615519	ProperStrand	179	1	-15.0005
chr15	81749772	81749823	protein_coding	Polr3h	intron	ENSMUSG00000022476	ProperStrand	11	chr11	72259404	72259457	protein_coding	Mybbp1a	exon	ENSMUSG00000040463	ProperStrand	279	1	-13.6946
chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	chr2	152101227	152101247	protein_coding	Csnk2a1	exon	ENSMUSG00000074698	ProperStrand	91	1	-6.1592
chr4	94574354	94574370	protein_coding	4930579C15Rik	exon	ENSMUSG00000028575	ProperStrand	5	chr7	133436462	133436514	protein_coding	Sbk1	utr3	ENSMUSG00000042978	ProperStrand	24	1	-18.9154
chr2	181437623	181437645	LINE	Lx7	L1	chr2Lx7181437209	ProperStrand	1	chr4	131908356	131908418	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-inf
chr4	11180581	11180608	protein_coding	Ints8	intron	ENSMUSG00000040738	ProperStrand	3	chr3	88497915	88497980	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	2	-inf
chr14	35168545	35168564	protein_coding	Fam25c	utr5	ENSMUSG00000043681	NonProperStrand	29	chr14	33005080	33005238	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	20	-inf
chr17	29800165	29800230	protein_coding	Ftsjd2	exon	ENSMUSG00000024019	ProperStrand	31	chr9	120039605	120039626	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	3	-10.9651
chr11	78086787	78086944	protein_coding	2610507B11Rik	exon	ENSMUSG00000010277	ProperStrand	246	chr11	68886975	68887025	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-1.6878
chr5	115795700	115795765	protein_coding	Cox6a1	utr3	ENSMUSG00000041697	ProperStrand	38	chr10	23505152	23505197	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.9123
chr11	70904705	70904785	protein_coding	Nlrp1a	utr3	ENSMUSG00000069830	ProperStrand	3	chr4	131865891	131865981	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.6896
chr7	109149271	109149287	protein_coding	Numa1	exon	ENSMUSG00000066306	NonProperStrand	171	chr13	108836693	108837640	protein_coding	2810008M24Rik	utr5	ENSMUSG00000071180	ProperStrand	3	1	-17.6500
chr2	31634062	31634142	protein_coding	Abl1	intron	ENSMUSG00000026842	ProperStrand	131	chr8	73419668	73419758	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-1.8096
chr10	79457334	79457398	protein_coding	Cnn2	utr3	ENSMUSG00000004665	ProperStrand	12	chr16	23110973	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.4686
chr5	111097653	111097698	protein_coding	Ep400	exon	ENSMUSG00000029505	ProperStrand	176	chr7	116664794	116664884	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-0.9348
chr19	55282215	55282233	protein_coding	Gucy2g	intron	ENSMUSG00000055523	NonProperStrand	2	chr1	88247819	88247835	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-12.5019
chr7	152118581	152125731	protein_coding	Ccnd1	utr5	ENSMUSG00000070348	ProperStrand	93	chr4	131908236	131908417	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-1.7181
chr14	52609527	52609726	protein_coding	Arhgef40	exon	ENSMUSG00000004562	ProperStrand	5	chr16	23111695	23111775	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-6.6731
chr15	89306280	89306402	protein_coding	Arsa	utr5	ENSMUSG00000022620	ProperStrand	5	chr1	141141577	141141594	protein_coding	Crb1	intron	ENSMUSG00000063681	ProperStrand	3	1	-inf
chr10	14583900	14583917	LTR	ETnERV-int	ERVK	chr10ETnERV-int14583675	NonProperStrand	2	chr17	47738288	47738388	protein_coding	Bysl	utr3	ENSMUSG00000023988	ProperStrand	48	2	-inf
chr10	93799505	93799525	protein_coding	Tmcc3	intron	ENSMUSG00000020023	ProperStrand	23	chr5	148113281	148113297	protein_coding	Cdx2	utr3	ENSMUSG00000029646	ProperStrand	276	1	-12.1959
chr5	76659330	76659347	protein_coding	Clock	exon	ENSMUSG00000029238	NonProperStrand	64	chr11	69481434	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-5.3186
chr15	96444476	96444566	protein_coding	Slc38a1	intron	ENSMUSG00000023169	ProperStrand	69	chr9	15119288	15119368	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-4.8384
chr2	90235319	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	5182465	5183343	protein_coding	Znrf3	exon	ENSMUSG00000041961	ProperStrand	63	1	-4.3696
chr14	87659491	87659512	LTR	MTEa	MaLR	chr14MTEa87659331	NonProperStrand	83	chr7	129245263	129245325	protein_coding	Ndufab1	exon	ENSMUSG00000030869	ProperStrand	11	1	-16.1115
chr6	105456889	105456979	LTR	MTC-int	MaLR	chr6MTC-int105456858	ProperStrand	1	chr6	105456633	105456712	LTR	RMER13A	ERVK	chr6RMER13A105456037	ProperStrand	1	1	-inf
chr8	124337667	124344045	protein_coding	Klhdc4	exon	ENSMUSG00000040263	ProperStrand	13	chr7	117190021	117190055	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-6.3017
chr2	164793876	164793897	protein_coding	Slc12a5	utr5	ENSMUSG00000017740	NonProperStrand	40	chr16	23111416	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.8604
chr10	18315422	18315466	protein_coding	D10Bwg1379e	intron	ENSMUSG00000019852	NonProperStrand	120	chr16	23111754	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-0.9245
chr7	137812904	137812921	protein_coding	Tacc2	intron	ENSMUSG00000030852	ProperStrand	95	chr17	35089181	35089239	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-4.5963
chr11	55313306	55313360	protein_coding	G3bp1	utr3	ENSMUSG00000018583	ProperStrand	106	chr11	68886943	68887033	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	7	-19.1325
chr16	20711969	20712001	protein_coding	Clcn2	exon	ENSMUSG00000022843	ProperStrand	7	chr8	40681587	40681603	protein_coding	Msr1	intron	ENSMUSG00000025044	ProperStrand	138	1	-16.0895
chr15	58768997	58770866	protein_coding	Ndufb9	exon	ENSMUSG00000022354	ProperStrand	13	chr15	78914636	78914671	protein_coding	Eif3l	exon	ENSMUSG00000033047	ProperStrand	81	1	-15.8597
chr4	43505826	43505906	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr7	19830260	19830350	protein_coding	Opa3	exon	ENSMUSG00000052214	ProperStrand	6	1	-7.6381
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr15	76005537	76005553	protein_coding	Plec	exon	ENSMUSG00000022565	ProperStrand	186	1	-10.8828
chr10	114848282	114848350	protein_coding	Zfc3h1	exon	ENSMUSG00000034163	ProperStrand	58	chr17	66173695	66173795	protein_coding	Ppp4r1	exon	ENSMUSG00000061950	ProperStrand	46	1	-13.9185
chr11	29118541	29118557	protein_coding	Smek2	utr3	ENSMUSG00000020463	NonProperStrand	2	chr4	143027927	143028559	protein_coding	Oog4	exon	ENSMUSG00000047799	NonProperStrand	99	1	-19.9021
chr2	170337006	170337022	protein_coding	Pfdn4	utr5	ENSMUSG00000052033	ProperStrand	55	chr4	131865855	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.9045
chr16	20397193	20398977	protein_coding	Abcc5	exon	ENSMUSG00000022822	ProperStrand	30	chr19	10701106	10701160	protein_coding	Ddb1	exon	ENSMUSG00000024740	ProperStrand	304	1	-11.4618
chr10	12902322	12902670	protein_coding	Ltv1	exon	ENSMUSG00000019814	ProperStrand	76	chr12	82825546	82825588	protein_coding	Map3k9	exon	ENSMUSG00000042724	ProperStrand	92	1	-11.9794
chr1	135028901	135029005	protein_coding	Ppp1r15b	exon	ENSMUSG00000046062	ProperStrand	46	chr16	23110968	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-5.9621
chr6	139789664	139789681	protein_coding	Pik3c2g	intron	ENSMUSG00000030228	ProperStrand	14	chr7	116663634	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	5	-inf
chr2	24035217	24035307	pseudogene	Gm13410	.	ENSMUSG00000083116	ProperStrand	7	chr9	120039538	120039618	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	7	-inf
chr19	37982110	37982128	protein_coding	Myof	exon	ENSMUSG00000048612	ProperStrand	37	chr10	110918549	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	4	-14.0110
chr7	4745711	4745727	protein_coding	Rpl28	exon	ENSMUSG00000030432	ProperStrand	220	chr19	8799847	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	2	-4.4785
chr2	162777501	162777522	protein_coding	L3mbtl1	intron	ENSMUSG00000035576	NonProperStrand	4	chr4	131865855	131865952	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.0048
chr1	65101621	65101711	LINE	L1MA4	L1	chr1L1MA465101611	ProperStrand	1	chr5	24666798	24666888	SINE	B4A	B4	chr5B4A24666756	ProperStrand	1	1	-inf
chr19	46582953	46583053	protein_coding	Trim8	intron	ENSMUSG00000025034	ProperStrand	29	chr13	34010630	34010688	protein_coding	Serpinb6a	exon	ENSMUSG00000060147	ProperStrand	24	1	-16.6599
chr5	66818783	66818801	protein_coding	Apbb2	intron	ENSMUSG00000029207	NonProperStrand	14	chr9	113984577	113984607	protein_coding	Susd5	intron	ENSMUSG00000086596	ProperStrand	10	1	-20.4644
chr13	37919560	37919577	protein_coding	Rreb1	utr5	ENSMUSG00000039087	ProperStrand	33	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.7641
chr2	167340821	167340837	protein_coding	Rnf114	utr3	ENSMUSG00000006418	NonProperStrand	5	chr9	120037992	120038018	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	3	-19.3861
chr18	35099931	35100517	protein_coding	Hspa9	exon	ENSMUSG00000024359	ProperStrand	166	chr19	8800386	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	5	-9.1214
chr7	116663633	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	chr19	8799581	8799645	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	13	-0.9729
chr1	178754159	178754175	protein_coding	Sdccag8	intron	ENSMUSG00000026504	ProperStrand	54	chr4	131865855	131865910	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.9337
chr10	80291060	80291125	protein_coding	Oaz1	exon	ENSMUSG00000035242	ProperStrand	49	chr4	131908689	131908710	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.5109
chr5	138038057	138038144	protein_coding	Mospd3	utr3	ENSMUSG00000037221	ProperStrand	2	chr3	123210854	123210889	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-9.1566
chr5	115777408	115777498	protein_coding	Srsf9	exon	ENSMUSG00000029538	ProperStrand	19	chr16	23110466	23110546	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.5826
chr14	35123961	35124065	protein_coding	Glud1	utr5	ENSMUSG00000021794	ProperStrand	72	chr9	45193491	45193507	protein_coding	Fxyd6	intron	ENSMUSG00000066705	NonProperStrand	108	1	-11.7659
chr15	79913286	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr17	71990252	71990297	snoRNA	ENSMUSG00000092887_Snord53	.	ENSMUSG00000092887	ProperStrand	53	2	-6.4588
chr1	75484537	75484553	protein_coding	Obsl1	exon	ENSMUSG00000026211	NonProperStrand	192	chr1	120549547	120550346	protein_coding	Tfcp2l1	exon	ENSMUSG00000026380	ProperStrand	158	1	-9.0396
chr18	35732064	35732138	protein_coding	Matr3	exon	ENSMUSG00000037236	ProperStrand	90	chr11	97642952	97642988	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.8083
chr5	104869416	104869494	protein_coding	Spp1	exon	ENSMUSG00000029304	ProperStrand	52	chr8	98269959	98270036	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	5	-21.6709
chr6	87801047	87801065	protein_coding	Cnbp	utr5	ENSMUSG00000030057	ProperStrand	46	chr17	39985355	39985458	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-6.4571
chr18	61748571	61749446	protein_coding	Csnk1a1	utr3	ENSMUSG00000024576	ProperStrand	64	chr16	23110902	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-2.1004
chr7	52958453	52958469	protein_coding	Car11	exon	ENSMUSG00000003273	NonProperStrand	250	chr1	59761674	59761695	snoRNA	ENSMUSG00000089093_Snord11	.	ENSMUSG00000089093	ProperStrand	193	1	-8.1151
chrX	103395862	103395952	protein_coding	Pgk1	intron	ENSMUSG00000062070	ProperStrand	484	chr4	56910549	56910629	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-2.2322
chr13	9833713	9833768	miRNA	mmu-mir-2134-4	.	ENSMUSG00000088609	ProperStrand	2	chr4	76614453	76614470	protein_coding	Ptprd	intron	ENSMUSG00000028399	ProperStrand	198	1	-18.5779
chr11	102558874	102558964	protein_coding	Ccdc43	exon	ENSMUSG00000020925	ProperStrand	26	chr11	6428095	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	6	-21.7652
chr15	96063288	96063304	lincRNA	4833422M21Rik	exon	ENSMUSG00000085460	NonProperStrand	37	chr6	31473043	31473140	protein_coding	Podxl	exon	ENSMUSG00000025608	ProperStrand	37	3	-19.2912
chr3	55987451	55987470	protein_coding	Nbea	utr5	ENSMUSG00000027799	ProperStrand	53	chr7	4745709	4745758	protein_coding	Rpl28	exon	ENSMUSG00000030432	ProperStrand	220	1	-10.9576
chr1	82882757	82882984	protein_coding	Agfg1	exon	ENSMUSG00000026159	ProperStrand	25	chr9	121823892	121823908	protein_coding	Cyp8b1	exon	ENSMUSG00000050445	NonProperStrand	101	1	-14.0418
chr5	50945908	50945988	LINE	L1Md_F2	L1	chr5L1Md_F250945815	NonProperStrand	1	chr5	50945722	50945812	SINE	B4	B4	chr5B450945692	NonProperStrand	1	1	-inf
chr10	13628210	13628228	LINE	Lx8	L1	chr10Lx813627463	ProperStrand	1	chr11	79391926	79391993	protein_coding	Nf1	utr3	ENSMUSG00000020716	ProperStrand	42	1	-inf
chr8	30983696	30983786	LTR	MTD-int	MaLR	chr8MTD-int30983170	ProperStrand	1	chr8	30983902	30983992	LTR	MTD-int	MaLR	chr8MTD-int30983848	ProperStrand	1	1	-inf
chr18	60981366	60982486	protein_coding	Tcof1	utr3	ENSMUSG00000024613	ProperStrand	68	chr17	24857742	24857780	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.0900
chr7	88529497	88529520	protein_coding	Cpeb1	intron	ENSMUSG00000025586	NonProperStrand	29	chr3	156978201	156978217	protein_coding	Negr1	utr3	ENSMUSG00000040037	NonProperStrand	25	1	-16.5525
chr17	28467858	28467908	protein_coding	Rpl10a	exon	ENSMUSG00000037805	ProperStrand	121	chr9	15118332	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-3.9849
chr11	102297205	102297376	protein_coding	Grn	exon	ENSMUSG00000034708	ProperStrand	43	chr1	162968214	162968294	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-7.4806
chr2	119791725	119791815	protein_coding	Mga	utr3	ENSMUSG00000033943	ProperStrand	180	chr7	117166748	117166828	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-2.7823
chr10	20672496	20672513	protein_coding	Ahi1	utr5	ENSMUSG00000019986	NonProperStrand	10	chr10	110918547	110918591	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-6.9682
chr18	73693114	73693138	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr1	59761635	59761716	snoRNA	ENSMUSG00000089093_Snord11	.	ENSMUSG00000089093	ProperStrand	193	3	-8.2789
chr6	47731682	47731722	misc_RNA	Y_RNA	.	ENSMUSG00000064945	ProperStrand	93	chr5	115939522	115939584	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	2	-11.2484
chr14	69861577	69861593	protein_coding	Slc25a37	utr3	ENSMUSG00000034248	ProperStrand	37	chr9	120038466	120038550	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.9292
chr16	30514154	30514171	protein_coding	Tmem44	utr3	ENSMUSG00000022537	ProperStrand	217	chr11	107073991	107074045	protein_coding	Pitpnc1	intron	ENSMUSG00000040430	ProperStrand	46	1	-11.2709
chr16	57391625	57391707	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr15	5068436	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	NonProperStrand	3	1	-16.7351
chrX	103764860	103764950	LINE	Lx9	L1	chrXLx9103764882	NonProperStrand	1	chrX	103764705	103764785	LTR	ORR1D1	MaLR	chrXORR1D1103764704	ProperStrand	1	1	-inf
chr8	113362430	113362485	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	chr7	118219704	118219740	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-0.8776
chr7	13614017	13614041	protein_coding	Trim28	exon	ENSMUSG00000005566	ProperStrand	296	chr16	43886832	43886917	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	2	-8.1316
chr7	135585982	135586082	protein_coding	Tial1	utr3	ENSMUSG00000030846	ProperStrand	25	chr19	8798743	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-6.5239
chr7	31895791	31899711	protein_coding	Hpn	utr5	ENSMUSG00000001249	ProperStrand	126	chr3	22088861	22089846	protein_coding	Tbl1xr1	exon	ENSMUSG00000027630	ProperStrand	44	1	-12.4499
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	103073641	103073658	protein_coding	Rab6b	intron	ENSMUSG00000032549	ProperStrand	4	1	-10.0500
chr11	97808773	97808853	protein_coding	Plxdc1	intron	ENSMUSG00000017417	ProperStrand	20	chr2	26494708	26494798	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	3	-12.3293
chr9	63042015	63042031	protein_coding	Map2k5	exon	ENSMUSG00000058444	ProperStrand	193	chr2	26494708	26494759	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.2254
chr10	126501413	126501444	protein_coding	Cdk4	exon	ENSMUSG00000006728	ProperStrand	47	chr1	162966009	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-4.0601
chr8	127556417	127556438	protein_coding	Tsnax	exon	ENSMUSG00000056820	ProperStrand	5	chr8	32260335	32260439	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-9.7163
chr2	90235285	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	120019728	120019745	protein_coding	Tead1	exon	ENSMUSG00000055320	NonProperStrand	41	3	-12.2316
chr4	136098885	136098907	protein_coding	Luzp1	exon	ENSMUSG00000001089	ProperStrand	35	chr19	26785161	26790606	protein_coding	Smarca2	exon	ENSMUSG00000024921	ProperStrand	38	1	-15.3243
chr9	25113748	25113848	protein_coding	Sept7	exon	ENSMUSG00000001833	ProperStrand	101	chr2	79843543	79843559	protein_coding	Pde1a	intron	ENSMUSG00000059173	NonProperStrand	275	1	-9.2171
chr14	119693352	119693368	protein_coding	Hs6st3	intron	ENSMUSG00000053465	NonProperStrand	134	chr5	121655016	121655097	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.3195
chr10	82418136	82418159	LTR	MT2B2	ERVL	chr10MT2B282418137	NonProperStrand	12	chr7	52645207	52645317	protein_coding	Snrnp70	intron	ENSMUSG00000063511	ProperStrand	61	1	-16.5056
chr11	102294588	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr3	85942712	85942776	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	1	-5.3462
chr17	34351749	34352357	protein_coding	Tap2	exon	ENSMUSG00000024339	ProperStrand	6	chr9	110280867	110281083	protein_coding	Scap	exon	ENSMUSG00000032485	ProperStrand	37	3	-18.6899
chr4	116550458	116550474	protein_coding	Zswim5	exon	ENSMUSG00000033948	ProperStrand	10	chr10	23505261	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.3364
chr9	30898035	30898932	protein_coding	St14	exon	ENSMUSG00000031995	ProperStrand	90	chr11	74718963	74719010	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	1	-8.2141
chr2	158182180	158182292	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	chr5	92485086	92485115	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	1	-1.0911
chrX	130830178	130830195	protein_coding	Tmem35	intron	ENSMUSG00000033578	ProperStrand	16	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.8202
chr5	130339152	130339252	protein_coding	Sumf2	utr3	ENSMUSG00000025538	ProperStrand	20	chr7	148634776	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-6.1264
chr16	13685313	13685403	protein_coding	Bfar	exon	ENSMUSG00000022684	ProperStrand	20	chr16	23110841	23110921	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.6223
chr7	29100373	29100457	protein_coding	Supt5h	exon	ENSMUSG00000003435	ProperStrand	123	chr16	15684310	15684331	protein_coding	Prkdc	exon	ENSMUSG00000022672	ProperStrand	22	3	-inf
chr12	88778709	88778767	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	chr1	162966823	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	2	-1.1776
chr7	28146782	28146798	protein_coding	Spnb4	exon	ENSMUSG00000011751	NonProperStrand	84	chr17	32839985	32840001	protein_coding	Cyp4f15	utr3	ENSMUSG00000073424	ProperStrand	1	1	-inf
chr14	66349405	66349421	protein_coding	Scara5	exon	ENSMUSG00000022032	NonProperStrand	5	chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	1	-15.7413
chr14	32124918	32124934	protein_coding	Dnahc1	utr5	ENSMUSG00000019027	ProperStrand	7	chr15	34370620	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-7.8301
chr2	153085493	153086988	protein_coding	Pofut1	exon	ENSMUSG00000046020	ProperStrand	17	chr7	116663668	116663748	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.8573
chr11	70821031	70821049	protein_coding	Derl2	utr3	ENSMUSG00000018442	NonProperStrand	5	chr8	73419657	73419773	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-8.1065
chr1	58652685	58652737	protein_coding	Ndufb3	utr3	ENSMUSG00000026032	ProperStrand	14	chr7	149170855	149171340	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	1	-14.2181
chr11	32960856	32960874	Other	RMER1A	Other	chr11RMER1A32960103	ProperStrand	2	chr7	116664809	116664900	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-9.7350
chr10	126988075	126988782	protein_coding	Lrp1	exon	ENSMUSG00000040249	ProperStrand	151	chr18	35714219	35714262	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-1.8574
chr10	110918549	110918639	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	chr15	71624756	71624798	snoRNA	ENSMUSG00000088895_SNORA81	.	ENSMUSG00000088895	ProperStrand	348	1	-0.7355
chr17	27988620	27988682	protein_coding	Snrpc	exon	ENSMUSG00000024217	ProperStrand	9	chr8	126039595	126039612	protein_coding	Gm20388	intron	ENSMUSG00000092329	ProperStrand	295	1	-14.0061
chr15	102844825	102844841	protein_coding	Hoxc5	exon	ENSMUSG00000022485	ProperStrand	40	chr4	131865867	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.4299
chr18	46767298	46767398	protein_coding	Eif1a	utr5	ENSMUSG00000057561	ProperStrand	44	chr17	24665450	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-5.5451
chr17	12875509	12875599	protein_coding	Igf2r	utr3	ENSMUSG00000023830	ProperStrand	151	chr7	116664794	116664874	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.1280
chr17	27700443	27700533	protein_coding	Hmga1	utr3	ENSMUSG00000046711	ProperStrand	180	chr4	131865384	131865464	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-2.0591
chr14	58200385	58232605	protein_coding	Xpo4	utr3	ENSMUSG00000021952	ProperStrand	39	chr4	131908236	131908399	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-3.7675
chr2	167836659	167836680	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	chr15	80722794	80722894	protein_coding	Tnrc6b	intron	ENSMUSG00000047888	ProperStrand	59	1	-12.1664
chr18	74378303	74378397	protein_coding	Cxxc1	exon	ENSMUSG00000024560	NonProperStrand	19	chr11	68886974	68886996	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-6.3948
chr19	57435752	57435769	protein_coding	Fam160b1	utr5	ENSMUSG00000033478	ProperStrand	49	chrX	84483701	84483743	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-8.6550
chr17	13162428	13185013	protein_coding	Wtap	intron	ENSMUSG00000060475	ProperStrand	119	chr7	117166722	117166822	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	2	-5.9864
chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	chr7	133939784	133940149	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	1	-4.3872
chr17	56257328	56257344	LTR	RLTR25B	ERVK	chr17RLTR25B56257276	NonProperStrand	75	chr11	106362641	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-6.9607
chr14	20451772	20451789	LTR	IAPLTR3-int	ERVK	chr14IAPLTR3-int20447903	ProperStrand	44	chr9	64024929	64024998	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	1	-9.7657
chr11	70792015	70792197	protein_coding	C1qbp	exon	ENSMUSG00000018446	ProperStrand	46	chr7	116664794	116664884	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.0158
chr9	108399239	108401032	protein_coding	Usp19	exon	ENSMUSG00000006676	ProperStrand	57	chr16	23110966	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-4.7551
chr5	122009145	122009161	LTR	RMER10B	ERVL	chr5RMER10B122008981	NonProperStrand	44	chr5	108334195	108334254	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-5.4229
chr16	29651853	29651874	protein_coding	Opa1	utr3	ENSMUSG00000038084	ProperStrand	33	chr11	101466293	101466350	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	1	-10.0762
chrX	148771874	148771964	protein_coding	Tspyl2	utr3	ENSMUSG00000041096	ProperStrand	23	chr5	147646732	147646812	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	1	-9.8928
chr1	34268045	34268135	protein_coding	Dst	utr5	ENSMUSG00000026131	ProperStrand	461	chrX	34622910	34622990	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	4	-2.2375
chr15	63775909	63781564	protein_coding	Fam49b	exon	ENSMUSG00000022378	ProperStrand	33	chr7	140955175	140955198	protein_coding	Dhx32	intron	ENSMUSG00000030986	ProperStrand	100	1	-13.4959
chr8	72287172	72287189	protein_coding	Zfp866	utr3	ENSMUSG00000043090	NonProperStrand	134	chr7	29136541	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	4	-5.0814
chr16	23110454	23110524	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	chrX	143918835	143918910	snoRNA	ENSMUSG00000084421_SNORA35	.	ENSMUSG00000084421	ProperStrand	293	2	-0.8594
chr17	33665860	33665921	protein_coding	Adamts10	exon	ENSMUSG00000024299	ProperStrand	5	chr1	192604864	192604964	protein_coding	Rps6kc1	intron	ENSMUSG00000089872	ProperStrand	241	1	-15.6891
chr18	10052133	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr3	40755217	40755233	protein_coding	Larp1b	intron	ENSMUSG00000037814	ProperStrand	29	1	-10.2673
chr16	33625643	33625662	protein_coding	Slc12a8	intron	ENSMUSG00000035506	ProperStrand	52	chrX	34622991	34623037	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-3.4318
chr1	108675801	108675839	protein_coding	Vps4b	intron	ENSMUSG00000009907	ProperStrand	29	chr19	8798483	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-6.6466
chr2	129111551	129111570	protein_coding	Ckap2l	exon	ENSMUSG00000048327	ProperStrand	16	chr7	150717363	150717425	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-8.1524
chr8	126031641	126031721	protein_coding	Dbndd1	intron	ENSMUSG00000031970	ProperStrand	2	chr5	151153622	151153712	protein_coding	Fry	intron	ENSMUSG00000056602	NonProperStrand	11	1	-21.3789
chr8	64017611	64028377	protein_coding	Palld	exon	ENSMUSG00000058056	NonProperStrand	125	chr16	23111732	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-4.2319
chr1	44067353	44067443	protein_coding-noncoding	A530098C11Rik	utr3	ENSMUSG00000047343	NonProperStrand	1	chr1	44067071	44067151	protein_coding	A530098C11Rik	intron	ENSMUSG00000047343	NonProperStrand	1	1	-inf
chr9	82764779	82764795	protein_coding	Phip	utr3	ENSMUSG00000032253	ProperStrand	43	chr16	23111758	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.4531
chr3	33713610	33713626	protein_coding	Ccdc39	exon	ENSMUSG00000027676	ProperStrand	106	chr8	32260373	32260426	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-3.5587
chr19	28909784	28953544	protein_coding	Slc1a1	exon	ENSMUSG00000024935	ProperStrand	2	chr14	52829473	52829563	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-15.6648
chr5	8329983	8330016	protein_coding	Adam22	exon	ENSMUSG00000040537	ProperStrand	16	chr9	15118303	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	4	-18.8938
chr7	52382616	52382915	protein_coding	Rpl13a	exon	ENSMUSG00000074129	ProperStrand	269	chr11	6519810	6519876	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-4.9913
chr4	137867787	137867846	protein_coding	Ddost	exon	ENSMUSG00000028757	ProperStrand	49	chr1	74902715	74902731	protein_coding	Cdk5r2	exon	ENSMUSG00000090071	NonProperStrand	49	1	-14.1407
chr7	52715007	52715108	protein_coding	Ftl1	utr5	ENSMUSG00000050708	ProperStrand	807	chr11	106362349	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	7	-11.1093
chr8	89365316	89365392	protein_coding	N4bp1	utr3	ENSMUSG00000031652	ProperStrand	98	chr5	54048233	54048323	protein_coding	Rbpj	utr3	ENSMUSG00000039191	ProperStrand	96	1	-11.3829
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr2	166890519	166890572	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-1.6368
chr4	79650420	79650445	pseudogene	Gm11410	.	ENSMUSG00000083219	ProperStrand	47	chr4	116826699	116826764	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	2	-11.6773
chr1	121317546	121317562	protein_coding	Inhbb	exon	ENSMUSG00000037035	ProperStrand	10	chr1	93342189	93345290	protein_coding	Per2	exon	ENSMUSG00000055866	ProperStrand	114	1	-15.6876
chrX	105903316	105903336	LINE	Lx7	L1	chrXLx7105902781	NonProperStrand	1	chr2	57090809	57090826	protein_coding	Gpd2	utr5	ENSMUSG00000026827	ProperStrand	93	1	-inf
chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	chr11	6519819	6519919	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-4.2978
chr2	84309170	84309188	protein_coding	Tfpi	intron	ENSMUSG00000027082	ProperStrand	9	chr9	40612842	40612921	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	3	-19.8571
chr14	35170125	35170187	SINE	B4	B4	chr14B435170079	ProperStrand	11	chr11	69483136	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	7	-inf
chr4	149191891	149191931	rRNA	n-R5s193	.	ENSMUSG00000064798	ProperStrand	17	chr10	107800720	107800810	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	3	-inf
chr8	73032360	73033207	protein_coding	2810422J05Rik	exon	ENSMUSG00000055553	ProperStrand	171	chr16	23110468	23110558	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-1.8192
chr7	31895791	31899711	protein_coding	Hpn	utr5	ENSMUSG00000001249	ProperStrand	126	chr2	26494800	26494824	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.8501
chr8	73033228	73033256	protein_coding	2810422J05Rik	exon	ENSMUSG00000055553	ProperStrand	171	chrX	34622905	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	4	-5.9873
chr3	153933541	153933558	protein_coding	Slc44a5	utr3	ENSMUSG00000028360	NonProperStrand	33	chr5	111121066	111121126	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-7.6266
chr1	154681024	154681041	protein_coding	Ncf2	exon	ENSMUSG00000026480	ProperStrand	12	chr11	116938695	116938749	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-9.4127
chr8	90661911	90663871	protein_coding	Heatr3	exon	ENSMUSG00000031657	ProperStrand	24	chr7	116663634	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-7.0482
chr5	119212811	119212856	protein_coding	Med13l	utr3	ENSMUSG00000018076	ProperStrand	226	chr3	121235245	121235261	protein_coding	Slc44a3	utr5	ENSMUSG00000039865	ProperStrand	8	1	-14.7796
chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	chr6	119987228	119987283	protein_coding	Wnk1	exon	ENSMUSG00000045962	ProperStrand	221	1	-7.6713
chrX	35899956	35899973	protein_coding	Cul4b	exon	ENSMUSG00000031095	NonProperStrand	89	chrX	34622906	34623021	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	63	-inf
chr7	106631348	106631438	snoRNA	ENSMUSG00000065822_Snord15a	.	ENSMUSG00000065822	ProperStrand	128	chr17	24856672	24856752	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-4.9466
chr10	62486473	62486528	protein_coding	Hnrnph3	utr5	ENSMUSG00000020069	ProperStrand	17	chr4	129295259	129295276	protein_coding	2510006D16Rik	intron	ENSMUSG00000028797	ProperStrand	2	1	-inf
chr3	153575089	153575168	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	chr1	89673596	89673788	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	3	-0.8064
chr19	38477345	38477380	protein_coding	Tmem20	exon	ENSMUSG00000044026	ProperStrand	4	chr16	23111443	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-6.3168
chr4	144222475	144222565	LINE	Lx3_Mus	L1	chr4Lx3_Mus144221860	NonProperStrand	1	chr2	155712334	155712414	protein_coding	Uqcc	intron	ENSMUSG00000005882	ProperStrand	13	1	-inf
chr5	119178380	119178444	protein_coding	Med13l	exon	ENSMUSG00000018076	ProperStrand	226	chr11	70813424	70813441	protein_coding	Dhx33	exon	ENSMUSG00000040620	ProperStrand	41	1	-11.4221
chr9	88419023	88419041	SINE	B4	B4	chr9B488418988	ProperStrand	75	chr11	116704533	116704549	protein_coding	Jmjd6	utr5	ENSMUSG00000056962	ProperStrand	92	1	-12.0062
chr7	30231470	30231593	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	chr6	131330290	131330315	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	ProperStrand	408	1	-5.0645
chr1	10085989	10086069	protein_coding	Cspp1	exon	ENSMUSG00000056763	ProperStrand	37	chr9	15119716	15119970	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	4	-11.7832
chr19	10344418	10344435	protein_coding	Dagla	intron	ENSMUSG00000035735	ProperStrand	23	chr2	91436311	91436334	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-9.4287
chr11	62416574	62418033	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr7	29136553	29136653	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	9	-4.0947
chr11	5152120	5152164	protein_coding	Kremen1	intron	ENSMUSG00000020393	ProperStrand	33	chr16	23110909	23111005	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.9284
chr16	37384897	37384913	protein_coding	Stxbp5l	utr5	ENSMUSG00000022829	ProperStrand	332	chr8	98270016	98270096	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-2.3771
chr6	82715420	82715440	lincRNA	Gm17034	exon	ENSMUSG00000090293	ProperStrand	1	chr16	23110828	23110894	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr5	34112034	34112050	protein_coding	Letm1	exon	ENSMUSG00000005299	NonProperStrand	145	chr8	13907805	13914960	protein_coding	Fbxo25	utr5	ENSMUSG00000038365	ProperStrand	7	2	-inf
chr8	13171215	13171285	protein_coding	Lamp1	exon	ENSMUSG00000031447	ProperStrand	92	chr2	180510920	180510937	protein_coding	Bhlhe23	exon	ENSMUSG00000045493	NonProperStrand	28	1	-13.9960
chr11	80415108	80415125	protein_coding	Myo1d	exon	ENSMUSG00000035441	ProperStrand	144	chr10	80375111	80375129	protein_coding	Lmnb2	intron	ENSMUSG00000062075	NonProperStrand	7	1	-15.9824
chr4	21797544	21798593	protein_coding	Sfrs18	exon	ENSMUSG00000028248	NonProperStrand	26	chr17	47684132	47684149	protein_coding	Ccnd3	intron	ENSMUSG00000034165	NonProperStrand	17	1	-17.4427
chr7	134171586	134171645	protein_coding	Kif22	exon	ENSMUSG00000030677	ProperStrand	63	chr1	88247802	88247876	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-5.0023
chr2	90235301	90235338	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr18	42696600	42697683	protein_coding	Tcerg1	exon	ENSMUSG00000024498	ProperStrand	210	1	-2.2059
chr6	85412052	85412123	protein_coding	Cct7	exon	ENSMUSG00000030007	ProperStrand	173	chr18	35714246	35714290	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	3	-4.7082
chr6	79892031	79892121	antisense	Gm4409	.	ENSMUSG00000086739	NonProperStrand	1	chr6	106493804	106493884	protein_coding	Cntn4	intron	ENSMUSG00000064293	NonProperStrand	14	1	-inf
chr11	68805560	68805610	protein_coding	Pfas	intron	ENSMUSG00000020899	ProperStrand	53	chr7	117190025	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.5602
chr7	131732977	131732995	LINE	Lx4A	L1	chr7Lx4A131732484	ProperStrand	3	chr2	26494708	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-9.2771
chr18	18118998	18119088	LINE	L1_Mus2	L1	chr18L1_Mus218118515	ProperStrand	1	chr13	67807707	67807797	protein_coding	Zfp71-rs1	utr3	ENSMUSG00000071281	ProperStrand	2	1	-inf
chr7	134671401	134671504	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	chr17	35089181	35089217	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	3	-2.8427
chr2	91736693	91736749	protein_coding	Ambra1	intron	ENSMUSG00000040506	ProperStrand	65	chr4	131865853	131865953	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.6453
chrX	150765543	150765559	LINE	L1_Mus2	L1	chrXL1_Mus2150765117	NonProperStrand	49	chr7	52381737	52381761	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-7.9791
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr16	38158107	38158218	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	2	-3.6907
chr4	131865966	131865989	lincRNA	Snhg12	exon	ENSMUSG00000086290	ProperStrand	178	chr17	39985198	39985291	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-3.8435
chr1	182836766	182836812	protein_coding	Pycr2	exon	ENSMUSG00000026520	ProperStrand	89	chr7	117166761	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-4.0645
chr9	54560627	54560643	protein_coding	Dnaja4	intron	ENSMUSG00000032285	ProperStrand	8	chr14	33005065	33005138	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-8.0215
chr11	95934349	95934453	protein_coding	Atp5g1	utr3	ENSMUSG00000006057	ProperStrand	9	chr10	80375107	80375125	protein_coding	Lmnb2	intron	ENSMUSG00000062075	NonProperStrand	7	1	-20.3522
chr14	31838696	31838719	protein_coding	Pbrm1	exon	ENSMUSG00000042323	ProperStrand	87	chr5	130300452	130300542	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.8963
chr2	158182156	158185564	lincRNA	9430008C03Rik	intron	ENSMUSG00000085385	ProperStrand	1039	chr4	131865380	131865492	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	5	-1.8914
chr8	122046425	122046441	protein_coding	Mbtps1	exon	ENSMUSG00000031835	NonProperStrand	16	chr15	98350146	98350263	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-7.3848
chr16	20509093	20509117	protein_coding	Eif2b5	utr3	ENSMUSG00000003235	ProperStrand	38	chr16	23111727	23111827	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	10	-21.1381
chrX	71517904	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	chr15	98356840	98356900	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	1	-1.4988
chr11	83038072	83038088	lincRNA	AI662270	exon	ENSMUSG00000087107	NonProperStrand	1	chr1	155590979	155591020	protein_coding	Rgs16	utr3	ENSMUSG00000026475	ProperStrand	1	1	-inf
chr19	3897538	3897554	protein_coding	Tcirg1	exon	ENSMUSG00000001750	NonProperStrand	15	chr16	23110873	23110904	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.0842
chr4	137068136	137068323	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	chr6	71832550	71832577	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	4	-4.8656
chr12	111930988	111931068	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr12	88778631	88778721	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-1.8467
chr15	35861744	35861787	protein_coding	Cox6c	utr3	ENSMUSG00000014313	ProperStrand	10	chr15	36702383	36702418	protein_coding	Ywhaz	utr3	ENSMUSG00000022285	ProperStrand	73	1	-16.6241
chr7	36369654	36369670	protein_coding	Rgs9bp	exon	ENSMUSG00000056043	ProperStrand	12	chr7	29136525	29136606	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.3856
chr2	158182156	158182180	lincRNA	9430008C03Rik	intron	ENSMUSG00000085385	ProperStrand	1039	chr11	116938618	116938718	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-1.1299
chr12	64904387	64904406	SINE	RSINE1	B4	chr12RSINE164904306	NonProperStrand	7	chr7	52382236	52382314	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-12.7031
chr5	106141049	106141075	protein_coding	Lrrc8d	intron	ENSMUSG00000046079	ProperStrand	40	chr11	69481387	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	8	-inf
chr5	143633862	143633886	protein_coding	Fbxl18	utr3	ENSMUSG00000066640	ProperStrand	64	chr2	26768369	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	3	-12.7555
chr10	126984011	126985427	protein_coding	Lrp1	exon	ENSMUSG00000040249	ProperStrand	151	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-5.1711
chr5	114401353	114401429	protein_coding	Ssh1	intron	ENSMUSG00000042121	ProperStrand	8	chr16	23111735	23111825	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-13.6893
chr11	42440243	42440259	protein_coding	Gabrb2	exon	ENSMUSG00000007653	ProperStrand	248	chr15	34370580	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-1.2164
chr10	120825223	120827744	protein_coding	Gns	exon	ENSMUSG00000034707	ProperStrand	19	chr19	8799836	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	5	-20.4064
chr15	55087985	55088020	protein_coding	Deptor	utr3	ENSMUSG00000022419	ProperStrand	17	chr7	148634706	148634796	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-6.4539
chr10	127575009	127575067	protein_coding	Rbms2	exon	ENSMUSG00000040043	ProperStrand	26	chr4	131908264	131908354	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.7765
chr7	107238162	107238240	protein_coding	Pold3	exon	ENSMUSG00000030726	ProperStrand	14	chr16	23110542	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.1866
chr2	147011594	147011610	protein_coding	Nkx2-2	exon	ENSMUSG00000027434	ProperStrand	47	chr9	53657504	53658716	protein_coding	Slc35f2	exon	ENSMUSG00000042195	ProperStrand	65	2	-inf
chr14	64081497	64081513	protein_coding	Fam167a	utr3	ENSMUSG00000035095	ProperStrand	80	chr7	29136525	29136612	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-3.4491
chr4	149026816	149026832	protein_coding	Pik3cd	exon	ENSMUSG00000039936	ProperStrand	151	chr7	52381719	52381761	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-5.7510
chr5	77418392	77418427	protein_coding	Srp72	exon	ENSMUSG00000036323	ProperStrand	41	chr5	108336372	108336462	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-5.6233
chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	chr2	91436261	91436318	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-4.5336
chr2	24825186	24827046	protein_coding	Wdr85	exon	ENSMUSG00000026975	ProperStrand	323	chr17	39985500	39985757	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	2	-4.8103
chr7	29252400	29252490	protein_coding	Lrfn1	exon	ENSMUSG00000030600	ProperStrand	19	chr7	116664843	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-4.6802
chr4	58083061	58083077	protein_coding	Svep1	exon	ENSMUSG00000028369	ProperStrand	54	chr2	146167747	146167854	protein_coding	Ralgapa2	exon	ENSMUSG00000037110	ProperStrand	35	1	-14.6156
chr10	79148216	79148316	protein_coding	Cdc34	intron	ENSMUSG00000020307	ProperStrand	30	chr15	79913288	79913352	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-8.1382
chr19	28761342	28761361	lincRNA	D930032P07Rik	intron	ENSMUSG00000086457	ProperStrand	10	chr12	77415431	77415483	protein_coding	Mthfd1	exon	ENSMUSG00000021048	ProperStrand	71	1	-16.6757
chr6	124760783	124760832	protein_coding	Tpi1	utr3	ENSMUSG00000023456	ProperStrand	94	chr11	69481334	69481401	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-2.4130
chr8	13159389	13159405	protein_coding	Lamp1	exon	ENSMUSG00000031447	ProperStrand	92	chr3	67161283	67161299	protein_coding	Rsrc1	utr3	ENSMUSG00000034544	NonProperStrand	71	1	-12.1167
chr9	78023109	78023180	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr9	44445842	44445880	protein_coding	Ddx6	utr3	ENSMUSG00000032097	ProperStrand	59	3	-13.6393
chr11	121692343	121692360	protein_coding	Ptchd3	exon	ENSMUSG00000039198	NonProperStrand	1	chr5	151755616	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-inf
chr2	38012954	38012970	protein_coding	Dennd1a	intron	ENSMUSG00000035392	NonProperStrand	128	chr4	131865460	131865515	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-2.6294
chr11	7067186	7069426	protein_coding	Adcy1	exon	ENSMUSG00000020431	ProperStrand	183	chr12	85780557	85780594	protein_coding	Aldh6a1	exon	ENSMUSG00000021238	ProperStrand	6	1	-15.8143
chr6	131315171	131315261	protein_coding	Csda	utr3	ENSMUSG00000030189	ProperStrand	86	chr19	8963096	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-3.1338
chr9	71327091	71327182	protein_coding	Polr2m	utr3	ENSMUSG00000032199	ProperStrand	83	chr9	71327214	71327294	protein_coding	Gcom1	exon	ENSMUSG00000092137	ProperStrand	55	47	-18.8722
chr2	128948851	128948908	protein_coding	Polr1b	exon	ENSMUSG00000027395	ProperStrand	27	chr19	8800377	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	5	-inf
chr2	155841347	155841438	protein_coding	Ergic3	intron	ENSMUSG00000005881	NonProperStrand	1	chr8	129468779	129468869	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	NonProperStrand	22	1	-inf
chr18	90561702	90561722	LTR	MER67D	ERV1	chr18MER67D90561477	NonProperStrand	1	chr13	101506031	101506088	protein_coding	Mrps36	utr3	ENSMUSG00000061474	ProperStrand	5	1	-inf
chr9	15130707	15131005	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	chr16	23111692	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	7	-1.8074
chr2	162898543	162898643	protein_coding	Mybl2	exon	ENSMUSG00000017861	ProperStrand	230	chr1	162967539	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-1.2632
chr7	134703998	134704484	protein_coding	Srcap	utr3	ENSMUSG00000090663	ProperStrand	28	chr16	23110964	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.2442
chr2	162900468	162909385	protein_coding	Mybl2	utr3	ENSMUSG00000017861	ProperStrand	230	chr2	26494708	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-1.9705
chr11	77316863	77316880	protein_coding	Git1	exon	ENSMUSG00000011877	ProperStrand	95	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.4660
chr15	98860842	98864572	protein_coding	Tuba1c	exon	ENSMUSG00000043091	ProperStrand	28	chr5	130300460	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-9.6022
chr2	135820133	135824418	protein_coding	Plcb4	exon	ENSMUSG00000039943	NonProperStrand	57	chr2	91436236	91436336	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-7.5997
chr15	102316433	102316459	protein_coding	Pcbp2	exon	ENSMUSG00000056851	ProperStrand	164	chr18	33954856	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-3.2618
chr5	118641433	118641479	protein_coding	Rnft2	utr3	ENSMUSG00000032850	ProperStrand	3	chr16	23110914	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr4	116826700	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	chr1	87983873	87983963	snoRNA	ENSMUSG00000077274_SNORA26	.	ENSMUSG00000077274	ProperStrand	361	1	-3.3392
chrX	59163563	59163653	LTR	IAPEY3_LTR	ERVK	chrXIAPEY3_LTR59163472	ProperStrand	1	chrX	59163743	59163823	LTR	IAPEz-int	ERVK	chrXIAPEz-int59163694	NonProperStrand	1	1	-inf
chr12	70259746	70260060	protein_coding	Rps29	utr5	ENSMUSG00000034892	ProperStrand	124	chr8	109079159	109079195	protein_coding	Cdh3	exon	ENSMUSG00000061048	ProperStrand	62	4	-inf
mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr9	45198928	45199653	protein_coding	Fxyd6	exon	ENSMUSG00000066705	NonProperStrand	108	1	-4.7609
chr8	26751780	26751796	protein_coding	Whsc1l1	exon	ENSMUSG00000054823	ProperStrand	36	chr8	73419725	73419775	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.0767
chr12	34643152	34643168	protein_coding	Twist1	exon	ENSMUSG00000035799	ProperStrand	3	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-15.3235
chr15	96523731	96523764	protein_coding	Slc38a2	exon	ENSMUSG00000022462	ProperStrand	133	chr18	33954817	33954907	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	5	-10.2765
chr13	3885850	3885950	protein_coding	Net1	exon	ENSMUSG00000021215	ProperStrand	32	chr2	26768405	26768433	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-6.8462
chr16	55967217	55967251	protein_coding	Rpl24	exon	ENSMUSG00000022601	ProperStrand	149	chr1	162966007	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-3.6379
chr17	15638595	15638645	protein_coding	Tbp	intron	ENSMUSG00000014767	ProperStrand	8	chr10	23505187	23505277	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.7871
chr2	127416744	127416825	protein_coding	Mrps5	intron	ENSMUSG00000027374	ProperStrand	84	chr15	34370545	34370607	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	5	-13.0529
chr5	5694090	5694114	protein_coding	Steap2	intron	ENSMUSG00000015653	NonProperStrand	11	chr3	68889027	68889129	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-6.5623
chr2	90235298	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	93027468	93027485	protein_coding	Ccdc38	intron	ENSMUSG00000036168	ProperStrand	12	1	-7.6663
chr10	79702715	79703139	protein_coding	Mum1	exon	ENSMUSG00000020156	ProperStrand	19	chr16	23111453	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-8.1189
chr12	57368398	57368417	DNA	MER5A	MER1_type	chr12MER5A57368332	NonProperStrand	5	chr12	112565198	112565215	protein_coding	Cdc42bpb	intron	ENSMUSG00000021279	ProperStrand	128	1	-16.8791
chr10	128006587	128006605	protein_coding	Erbb3	exon	ENSMUSG00000018166	ProperStrand	49	chr8	73419657	73419757	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.4996
chr2	145076804	145209255	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	chr8	13876097	13876197	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	2	-3.5043
chr4	74843493	74843509	LINE	Lx9	L1	chr4Lx974843264	NonProperStrand	30	chr11	120145851	120146114	protein_coding	Bahcc1	exon	ENSMUSG00000039741	ProperStrand	118	1	-13.3600
chr5	31969664	31969680	protein_coding	Rbks	intron	ENSMUSG00000029136	ProperStrand	3	chr2	129626737	129626760	protein_coding	Stk35	intron	ENSMUSG00000037885	NonProperStrand	10	1	-inf
chr15	51852872	51852952	LTR	RLTR13B4	ERVK	chr15RLTR13B451852838	ProperStrand	1	chr15	51852733	51852823	SINE	B4A	B4	chr15B4A51852666	NonProperStrand	1	1	-inf
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr18	84697627	84697645	protein_coding	Zfp407	intron	ENSMUSG00000048410	NonProperStrand	16	1	-10.4721
chr4	151730301	151730737	protein_coding	Chd5	exon	ENSMUSG00000005045	NonProperStrand	147	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-5.9669
chr13	95856366	95856384	protein_coding	Pde8b	intron	ENSMUSG00000021684	ProperStrand	43	chr16	23111776	23111808	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.4531
chr8	86204988	86205086	protein_coding	Pkn1	exon	ENSMUSG00000057672	NonProperStrand	8	chr8	129468746	129468842	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	2	-13.6615
chr13	23831257	23831330	protein_coding	Hist1h1c	exon	ENSMUSG00000036181	ProperStrand	99	chr8	113366285	113366310	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	2	-13.0327
chr13	113287950	113288050	protein_coding	Il6st	exon	ENSMUSG00000021756	ProperStrand	34	chr1	63225627	63225675	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-7.8022
chr2	129998661	129998715	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr10	90581034	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	5	-4.5356
chr3	90310290	90310367	protein_coding	2500003M10Rik	utr5	ENSMUSG00000001017	ProperStrand	28	chr4	131865868	131865958	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.0580
chr7	19935606	19941818	protein_coding	Ercc1	exon	ENSMUSG00000003549	NonProperStrand	35	chr4	131865854	131865935	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-7.0012
chr6	97122776	97122792	protein_coding	Tmf1	intron	ENSMUSG00000030059	ProperStrand	33	chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-8.9402
chr15	76282479	76282526	protein_coding	Heatr7a	exon	ENSMUSG00000022558	ProperStrand	48	chr5	128076288	128076304	protein_coding	Slc15a4	utr3	ENSMUSG00000029416	ProperStrand	49	1	-14.1744
chr15	81785023	81785043	protein_coding	Pmm1	intron	ENSMUSG00000022474	ProperStrand	24	chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	1	-11.6110
chr17	56552264	56552331	protein_coding	Ptprs	utr3	ENSMUSG00000013236	ProperStrand	152	chr11	116535464	116535532	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	1	-4.1183
chrX	71197101	71197324	protein_coding	Hcfc1	exon	ENSMUSG00000031386	ProperStrand	424	chr15	79908957	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-1.9203
chr17	95160909	95218242	protein_coding	2610044O15Rik	exon	ENSMUSG00000066057	NonProperStrand	70	chr11	116533841	116533893	snoRNA	ENSMUSG00000065640_Snord1c	.	ENSMUSG00000065640	ProperStrand	373	1	-9.3436
chr13	112391959	112391976	processed_transcript	Gm15286	.	ENSMUSG00000086649	NonProperStrand	16	chr15	98763578	98764768	protein_coding	Tuba1b	exon	ENSMUSG00000023004	ProperStrand	32	1	-17.2974
chr9	66896006	66896022	protein_coding	Tpm1	exon	ENSMUSG00000032366	ProperStrand	23	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-11.3090
chr9	63994858	63994902	protein_coding	Zwilch	intron	ENSMUSG00000032400	ProperStrand	29	chr8	32260335	32260363	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	2	-9.8657
chr7	116664793	116664876	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	chr12	60774056	60774107	snoRNA	ENSMUSG00000077603_SNORA3	.	ENSMUSG00000077603	ProperStrand	185	3	-2.8884
chr6	52184166	52184185	protein_coding	Hoxa10	exon	ENSMUSG00000000938	ProperStrand	2	chr8	73419657	73419784	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-10.3981
chr5	129491601	129491624	protein_coding	Stx2	utr3	ENSMUSG00000029428	ProperStrand	3	chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	1	-14.9660
chr6	54379743	54379760	lincRNA	9130019P16Rik	exon	ENSMUSG00000073067	ProperStrand	255	chr17	35089181	35089229	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-2.7794
chr15	66577192	66577214	protein_coding	Tg	intron	ENSMUSG00000053469	ProperStrand	4	chr2	130101257	130101311	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-12.2451
chr2	26250590	26252441	protein_coding	Pmpca	utr3	ENSMUSG00000026926	ProperStrand	45	chr16	23111420	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-3.1133
chr2	26493363	26493390	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr15	25729871	25729971	protein_coding	Myo10	exon	ENSMUSG00000022272	ProperStrand	168	1	-4.2026
chr13	69637345	69637363	protein_coding	Papd7	utr3	ENSMUSG00000034575	ProperStrand	10	chr9	40612836	40612869	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	1	-13.2074
chr5	23907915	23907931	protein_coding	Abcb8	exon	ENSMUSG00000028973	NonProperStrand	49	chr2	158182156	158182277	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-5.3966
chr6	145564547	145564563	protein_coding	Tuba3b	utr5	ENSMUSG00000067338	ProperStrand	152	chr4	131865854	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-2.1074
chr4	108507284	108507302	protein_coding	Txndc12	utr5	ENSMUSG00000028567	ProperStrand	23	chr15	34370619	34370676	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-5.3878
chr1	162967491	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	chr1	162967115	162967162	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	6	-3.7660
chr4	147914209	147914468	protein_coding	Mtor	exon	ENSMUSG00000028991	ProperStrand	65	chr1	89681177	89681257	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-5.2849
chr2	24843454	24843483	protein_coding	Pnpla7	intron	ENSMUSG00000036833	ProperStrand	13	chr1	162965984	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	3	-15.3055
chr19	6054864	6054954	protein_coding	Mrpl49	exon	ENSMUSG00000007338	NonProperStrand	1	chr19	6055836	6055926	protein_coding	Mrpl49	intron	ENSMUSG00000007338	ProperStrand	2	1	-inf
chr14	31953025	31953118	protein_coding	Stab1	exon	ENSMUSG00000042286	NonProperStrand	127	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.9123
chr9	65913363	65913453	protein_coding	Ppib	exon	ENSMUSG00000032383	ProperStrand	31	chr16	23111373	23111429	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-8.5508
chr15	81416649	81416749	protein_coding	Ep300	utr5	ENSMUSG00000055024	ProperStrand	118	chr7	148634727	148634763	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-2.7557
chr1	191695376	191695476	protein_coding	Ptpn14	utr3	ENSMUSG00000026604	ProperStrand	74	chr10	110918639	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-3.0683
chr12	78000547	78000565	protein_coding	Fntb	intron	ENSMUSG00000033373	ProperStrand	176	chr7	117190014	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-1.5324
chr4	115484059	115484075	protein_coding	Atpaf1	utr3	ENSMUSG00000028710	ProperStrand	202	chrX	71517835	71517954	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	6	-19.5134
chr3	137529012	137529062	protein_coding	H2afz	exon	ENSMUSG00000037894	ProperStrand	72	chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	3	-12.7713
chr15	79913289	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr3	88603799	88603899	pseudogene	5830417I10Rik	.	ENSMUSG00000078684	ProperStrand	68	1	-3.3623
chr2	26493426	26493518	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr13	49167407	49167884	protein_coding	Wnk2	exon	ENSMUSG00000037989	ProperStrand	20	1	-8.3972
chr12	106455760	106455850	protein_coding	Tcl1	utr3	ENSMUSG00000041359	ProperStrand	27	chr16	23110889	23110969	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.1875
chr11	101614579	101616071	protein_coding	Dhx8	exon	ENSMUSG00000034931	ProperStrand	48	chr14	33005156	33005236	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-4.4169
chr4	143748332	143749010	protein_coding	Oog3	exon	ENSMUSG00000050810	NonProperStrand	78	chr15	34370545	34370622	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-3.0719
chr1	36161622	36161728	protein_coding	Hs6st1	utr3	ENSMUSG00000045216	ProperStrand	63	chr3	95980364	95980410	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-6.7607
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr19	9043861	9043931	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	1	-4.5445
chr5	9132601	9136070	protein_coding	Dmtf1	exon	ENSMUSG00000042508	NonProperStrand	8	chr17	13115690	13115780	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	7	-19.2363
chr13	49788533	49797231	protein_coding	Iars	exon	ENSMUSG00000037851	ProperStrand	95	chr4	131908236	131908344	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	5	-5.5411
chr12	110892839	110892882	snoRNA	ENSMUSG00000064621_AF357355	.	ENSMUSG00000064621	ProperStrand	60	chr16	23111778	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-7.3889
chr8	86184898	86184939	protein_coding	Gipc1	exon	ENSMUSG00000019433	ProperStrand	60	chr16	23110960	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-0.7998
chrX	84483699	84483716	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr2	32818822	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	3	-3.3914
chr4	116827859	116827892	snoRNA	ENSMUSG00000064751_SNORD46	.	ENSMUSG00000064751	ProperStrand	132	chr19	8963020	8963129	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.0917
chr7	72488508	72488540	protein_coding	Tjp1	exon	ENSMUSG00000030516	ProperStrand	78	chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	1	-8.0683
chr19	25016725	25016792	snoRNA	ENSMUSG00000064896_SNORA19	.	ENSMUSG00000064896	ProperStrand	88	chr12	106269338	106269428	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-3.4273
chr1	136213769	136225778	protein_coding	Ppfia4	exon	ENSMUSG00000026458	ProperStrand	45	chr16	23111716	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-4.2245
chr3	134151041	134151057	lincRNA	Gm16742	intron	ENSMUSG00000084777	NonProperStrand	42	chr14	19101591	19101617	protein_coding	Rpl15	exon	ENSMUSG00000012405	NonProperStrand	3	1	-inf
chrX	94530800	94530890	protein_coding	Eda2r	utr3	ENSMUSG00000034457	ProperStrand	7	chr8	98276574	98276660	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	2	-20.0407
chr12	110888779	110888869	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr1	16430499	16453155	protein_coding	Stau2	utr5	ENSMUSG00000025920	ProperStrand	7	1	-13.0901
chr11	115999916	115999932	protein_coding	Mrpl38	exon	ENSMUSG00000020775	NonProperStrand	65	chr15	36527806	36527856	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	1	-7.7229
chr19	44110735	44110835	protein_coding	Erlin1	utr3	ENSMUSG00000025198	ProperStrand	9	chr1	88247755	88247789	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-8.9268
chr8	113645130	113658732	protein_coding	Pdpr	exon	ENSMUSG00000033624	ProperStrand	49	chr16	23111371	23111451	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	8	-15.5696
chr7	51505840	51505884	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	chr16	38158127	38158227	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	5	-16.4791
chr4	91012543	91012564	protein_coding	Elavl2	intron	ENSMUSG00000008489	ProperStrand	52	chr7	13516153	13516193	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	1	-8.9536
chr9	22167288	22168436	protein_coding	Anln	exon	ENSMUSG00000036777	ProperStrand	133	chr17	39985189	39985279	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-4.3913
chr1	120503775	120503804	protein_coding	Clasp1	utr3	ENSMUSG00000064302	ProperStrand	23	chr16	23110953	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.4133
chr3	156978201	156978217	protein_coding	Negr1	utr3	ENSMUSG00000040037	NonProperStrand	25	chr2	26494795	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-7.9096
chr12	68768909	68768989	LINE	L1Md_F2	L1	chr12L1Md_F268768613	NonProperStrand	12	chr6	22380839	22380929	LINE	L1Md_F3	L1	chr6L1Md_F322380457	NonProperStrand	1	1	-inf
chr8	73419648	73419738	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	chr7	128061066	128061123	tRNA	tRNA559-LeuAAG	.	131394	ProperStrand	7	1	-7.3719
chr11	6428054	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr9	64023696	64023746	snoRNA	ENSMUSG00000064918_SNORD18	.	ENSMUSG00000064918	ProperStrand	370	3	-1.9827
chr17	39979952	39979983	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr3	95980349	95980410	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-1.3425
chr13	81962989	81963009	SINE	B1F2	Alu	chr13B1F281962960	ProperStrand	15	chr4	149026816	149026832	protein_coding	Pik3cd	exon	ENSMUSG00000039936	ProperStrand	151	1	-14.2820
chr8	72353372	72353472	protein_coding	Lpar2	utr3	ENSMUSG00000031861	ProperStrand	44	chr11	97642952	97642968	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-7.7277
chr8	113578492	113578967	protein_coding	Aars	exon	ENSMUSG00000031960	ProperStrand	355	chr10	90581049	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-1.6615
chr14	103488882	103488905	protein_coding-noncoding	Fbxl3	utr3	ENSMUSG00000022124	ProperStrand	17	chr19	44188368	44188431	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	1	-10.3472
chr8	12757419	12757437	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr9	15119281	15119425	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	2	-2.0861
chr2	26317704	26317879	protein_coding	Notch1	exon	ENSMUSG00000026923	ProperStrand	145	chr16	23111708	23111798	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-1.4744
chr9	65049531	65049631	snRNA	ENSMUSG00000075930_U5	.	ENSMUSG00000075930	ProperStrand	175	chr16	23110870	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	15	-6.0027
chr4	51241827	51241847	protein_coding	Cylc2	intron	ENSMUSG00000039555	NonProperStrand	1	chr2	26494708	26494840	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-inf
chr17	35196098	35196145	protein_coding	Ddah2	utr5	ENSMUSG00000007039	ProperStrand	23	chr16	23111416	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.7951
chr17	24301807	24306188	protein_coding	Atp6v0c	exon	ENSMUSG00000024121	ProperStrand	75	chr11	69481359	69481449	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	18	-20.7490
chr16	32243855	32243943	snoRNA	ENSMUSG00000080440_SNORA79	.	ENSMUSG00000080440	ProperStrand	140	chr1	161270439	161270517	snoRNA	ENSMUSG00000089536_Scarna3a	.	ENSMUSG00000089536	ProperStrand	247	3	-19.3176
chr9	70089134	70089151	protein_coding	Myo1e	intron	ENSMUSG00000032220	NonProperStrand	8	chr7	118219694	118219740	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-8.2090
chr17	88385861	88385890	protein_coding	Msh6	exon	ENSMUSG00000005370	ProperStrand	150	chr9	45525530	45525546	protein_coding	Dscaml1	exon	ENSMUSG00000032087	ProperStrand	23	1	-13.4152
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr5	121655032	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-0.9306
chr11	45722531	45722565	protein_coding	Clint1	exon	ENSMUSG00000006169	ProperStrand	19	chr8	26787228	26787244	protein_coding	Whsc1l1	exon	ENSMUSG00000054823	ProperStrand	36	1	-16.7287
chr8	3211687	3258431	protein_coding	Insr	exon	ENSMUSG00000005534	ProperStrand	25	chr19	8963085	8963175	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.8447
chr11	116463518	116463605	protein_coding	Rhbdf2	exon	ENSMUSG00000020806	ProperStrand	20	chr1	162965535	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.3741
chr8	32276999	32277099	protein_coding	Mak16	exon	ENSMUSG00000031578	ProperStrand	26	chr5	74489618	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-5.3862
chrX	117423351	117423368	protein_coding	Pcdh11x	intron	ENSMUSG00000034755	ProperStrand	15	chr11	97643032	97643080	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-5.0602
chr5	138631560	138631746	protein_coding	Cnpy4	exon	ENSMUSG00000036968	ProperStrand	6	chr4	131865856	131865936	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-6.1051
chr11	104204946	104211811	protein_coding	1700081L11Rik	exon	ENSMUSG00000018412	ProperStrand	73	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-6.5940
chr19	12066899	12066933	protein_coding	Osbp	utr3	ENSMUSG00000024687	ProperStrand	19	chr14	54882506	54882553	protein_coding	Abhd4	exon	ENSMUSG00000040997	ProperStrand	21	1	-17.6106
chr19	11857619	11859888	protein_coding	Stx3	exon	ENSMUSG00000041488	ProperStrand	37	chr13	54626067	54626084	protein_coding	4732471D19Rik	exon	ENSMUSG00000043183	NonProperStrand	18	1	-16.7190
chr7	59599534	59599624	LINE	Lx3_Mus	L1	chr7Lx3_Mus59599306	ProperStrand	1	chr7	59599703	59599783	LINE	Lx3_Mus	L1	chr7Lx3_Mus59599645	NonProperStrand	1	1	-inf
chr3	142454818	142454865	protein_coding	Pkn2	utr3	ENSMUSG00000004591	ProperStrand	28	chr2	57900146	57900162	protein_coding	Ermn	utr3	ENSMUSG00000026830	ProperStrand	27	1	-16.4796
chr9	63868722	63868739	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	chrX	98991151	98991223	protein_coding	8030474K03Rik	exon	ENSMUSG00000046774	ProperStrand	8	4	-19.4234
chr4	122968617	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	chr9	15120015	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	18	-20.2265
chr16	19883897	19884019	protein_coding	A930003A15Rik	exon	ENSMUSG00000075330	ProperStrand	93	chr9	15118245	15118320	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-2.6822
chr10	62486473	62486559	protein_coding	Hnrnph3	utr5	ENSMUSG00000020069	ProperStrand	17	chr4	131865395	131865485	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-6.4708
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr3	20238638	20238656	protein_coding	Agtr1b	intron	ENSMUSG00000054988	NonProperStrand	39	1	-10.2370
chr2	72243878	72243894	protein_coding	B230120H23Rik	utr3	ENSMUSG00000004085	NonProperStrand	26	chr1	162967489	162967572	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-5.0673
chr6	115666567	115666657	LTR	RMER17C	ERVK	chr6RMER17C115666480	NonProperStrand	1	chr12	112839212	112839302	protein_coding	Mark3	intron	ENSMUSG00000007411	ProperStrand	37	1	-inf
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr17	33961611	33966613	protein_coding	Ndufa7	exon	ENSMUSG00000041881	ProperStrand	64	1	-8.5865
chr13	67002411	67002500	protein_coding	Uqcrb	exon	ENSMUSG00000021520	ProperStrand	5	chr8	73419729	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-8.1065
chr8	112576416	112576432	LINE	L1_Mus3	L1	chr8L1_Mus3112576213	ProperStrand	24	chr8	73419531	73419565	protein_coding	Rpl18a	exon	ENSMUSG00000045128	ProperStrand	394	1	-11.3969
chr2	9837539	9837610	protein_coding	Taf3	utr3	ENSMUSG00000025782	ProperStrand	62	chr4	130305549	130305619	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	1	-9.8438
chr7	146069406	146069496	protein_coding	Ppp2r2d	intron	ENSMUSG00000041769	ProperStrand	62	chr5	108336378	108336458	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	5	-18.8469
chr14	31380220	31381423	protein_coding	Tkt	exon	ENSMUSG00000021957	ProperStrand	160	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.6279
chr7	26509163	26509253	protein_coding	Hnrnpul1	intron	ENSMUSG00000040725	ProperStrand	84	chr3	68889162	68889244	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-2.6590
chr8	108734812	108734828	protein_coding	Slc7a6os	utr5	ENSMUSG00000033106	NonProperStrand	29	chr4	131908419	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.5844
chrX	70927543	70927601	protein_coding	Slc6a8	utr3	ENSMUSG00000019558	ProperStrand	47	chr9	15119674	15119713	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.0610
chr10	77673589	77673620	protein_coding	Trappc10	exon	ENSMUSG00000000374	ProperStrand	11	chr9	120039587	120039622	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-10.8347
chr16	91227718	91227735	protein_coding	Olig2	utr3	ENSMUSG00000039830	NonProperStrand	78	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-6.4631
chr4	99654635	99656632	protein_coding	Pgm2	exon	ENSMUSG00000025791	ProperStrand	43	chr9	15119733	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	5	-14.1008
chr14	56389353	56390228	protein_coding	Adcy4	exon	ENSMUSG00000022220	ProperStrand	29	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-13.1568
chr17	45705487	45705840	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr7	30231502	30231592	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	8	-20.3871
chr2	178148094	178148112	protein_coding	Ppp1r3d	exon	ENSMUSG00000049999	ProperStrand	6	chr2	91436275	91436336	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-12.2475
chr10	57933396	57933456	protein_coding	Ranbp2	exon	ENSMUSG00000003226	ProperStrand	52	chr11	77995189	77995252	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-6.4657
chr11	71973005	71973079	protein_coding	4933427D14Rik	intron	ENSMUSG00000020807	ProperStrand	13	chr16	23110852	23110942	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.3283
chr2	24825186	24827046	protein_coding	Wdr85	exon	ENSMUSG00000026975	ProperStrand	323	chr2	127259863	127259939	protein_coding	Gpat2	exon	ENSMUSG00000046338	ProperStrand	19	1	-12.2734
chr6	120809706	120809796	protein_coding	Bcl2l13	intron	ENSMUSG00000009112	ProperStrand	18	chr5	108336363	108336443	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-7.2692
chr4	106682526	106682626	protein_coding-noncoding	Ssbp3	utr5	ENSMUSG00000061887	ProperStrand	21	chr3	123210854	123210938	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	19	-20.7853
chrX	139771951	139771969	protein_coding	Chrdl1	intron	ENSMUSG00000031283	NonProperStrand	2	chr9	40611684	40611748	snoRNA	ENSMUSG00000075876_Snord14c	.	ENSMUSG00000075876	ProperStrand	104	1	-inf
chr2	90235314	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr3	153575089	153575133	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	2	-1.3190
chr17	39985191	39985286	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr2	26767759	26767807	snoRNA	ENSMUSG00000064829_SNORD36	.	ENSMUSG00000064829	ProperStrand	98	6	-21.3220
chr8	123191783	123191862	protein_coding	Cox4nb	exon	ENSMUSG00000031819	ProperStrand	21	chr17	24857750	24857840	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.2024
chr4	116862585	116862663	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	chr5	111121110	111121200	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-2.2673
chr3	102932526	102932555	protein_coding	Dennd2c	intron	ENSMUSG00000007379	ProperStrand	19	chr2	150402275	150402292	protein_coding	Cst7	intron	ENSMUSG00000068129	ProperStrand	2	1	-inf
chr19	10973555	10973591	protein_coding	Prpf19	exon	ENSMUSG00000024735	ProperStrand	75	chr2	22444880	22444909	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-7.3317
chr2	119070969	119071011	protein_coding	Spint1	exon	ENSMUSG00000027315	ProperStrand	17	chr11	36140937	36140955	protein_coding	Odz2	intron	ENSMUSG00000049336	ProperStrand	106	1	-14.7293
chr17	56397392	56402228	protein_coding	Fem1a	exon	ENSMUSG00000043683	ProperStrand	11	chr16	23110911	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-10.0359
chr11	115653173	115656086	protein_coding	2310067B10Rik	exon	ENSMUSG00000020747	ProperStrand	74	chr16	23110874	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-1.6723
chr13	103526364	103895257	protein_coding	Mast4	exon	ENSMUSG00000034751	ProperStrand	150	chr19	8963028	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-3.0322
chr19	41990103	41990181	protein_coding	Pgam1	exon	ENSMUSG00000011752	ProperStrand	124	chr7	133726521	133726538	protein_coding	Cln3	exon	ENSMUSG00000030720	ProperStrand	87	1	-11.1087
chr17	71323779	71324801	protein_coding	Myl12b	exon	ENSMUSG00000034868	ProperStrand	35	chr16	23110564	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.4208
chr19	27900638	27905112	protein_coding	Rfx3	exon	ENSMUSG00000040929	ProperStrand	92	chr10	90432659	90432681	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	1	-9.7606
chr6	115549429	115549519	LTR	ORR1A2-int	MaLR	chr6ORR1A2-int115549441	NonProperStrand	1	chr6	115549304	115549394	SINE	B1_Mus1	Alu	chr6B1_Mus1115549300	ProperStrand	1	1	-inf
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr18	36276586	36276603	protein_coding	Nrg2	intron	ENSMUSG00000060275	ProperStrand	16	1	-8.5577
chr4	138840843	138840862	protein_coding	Capzb	intron	ENSMUSG00000028745	ProperStrand	44	chr7	148634701	148634800	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-4.5761
chr19	32464273	32464289	lincRNA	2700046G09Rik	exon	ENSMUSG00000024893	ProperStrand	59	chr2	158182175	158182213	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-5.0350
chr6	125581151	125581172	protein_coding	Vwf	exon	ENSMUSG00000001930	ProperStrand	20	chr10	106266059	106266075	protein_coding	Ppfia2	exon	ENSMUSG00000053825	ProperStrand	20	1	-17.5916
chr1	88247799	88247876	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	chr2	130103435	130103503	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	2	-1.5307
chr6	146974769	146974800	protein_coding	Ppfibp1	exon	ENSMUSG00000016487	ProperStrand	11	chr17	24857717	24857807	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-5.4831
chr5	31505409	31505486	protein_coding	Ppm1g	utr3	ENSMUSG00000029147	ProperStrand	69	chr15	79913288	79913332	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	7	-19.8667
chr7	52147231	52147479	protein_coding	Med25	utr5	ENSMUSG00000002968	ProperStrand	33	chr1	162965532	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.3958
chr5	114848852	114849850	protein_coding	Ube3b	exon	ENSMUSG00000029577	ProperStrand	26	chr4	131908356	131908412	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.7765
chr4	128999120	128999221	protein_coding	Rbbp4	exon	ENSMUSG00000057236	ProperStrand	22	chr16	23110550	23110577	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.2978
chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr18	33954817	33954954	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	5	-1.2849
chrX	47931199	47933793	lincRNA	6720401G13Rik	intron	ENSMUSG00000085396	ProperStrand	34	chr16	23110961	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.8174
chr4	128867196	128867212	protein_coding	Yars	exon	ENSMUSG00000028811	ProperStrand	131	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-6.1923
chr2	30751605	30751623	protein_coding	Ptges	intron	ENSMUSG00000050737	NonProperStrand	10	chr18	75161533	75161566	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-10.8532
chr7	150755310	150755389	protein_coding	Cars	exon	ENSMUSG00000010755	ProperStrand	62	chr18	35714263	35714290	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-5.7796
chr4	116311550	116311579	protein_coding	Akr1a1	intron	ENSMUSG00000028692	ProperStrand	35	chr4	131908236	131908285	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.2627
chr3	8930838	8930892	protein_coding	Tpd52	utr3	ENSMUSG00000027506	ProperStrand	37	chr9	120039594	120039626	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-7.0793
chr14	66705876	66708369	protein_coding	Ephx2	exon	ENSMUSG00000022040	ProperStrand	6	chr4	131866236	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-13.4907
chr17	28850729	28865364	protein_coding	Mapk14	utr5	ENSMUSG00000053436	ProperStrand	40	chr3	123210854	123210940	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	15	-inf
chr17	95160908	95218243	protein_coding	2610044O15Rik	exon	ENSMUSG00000066057	NonProperStrand	70	chr4	131866154	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-3.3813
chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	chr16	43959359	43959426	protein_coding	2610015P09Rik	exon	ENSMUSG00000022701	ProperStrand	12	1	-12.7273
chr2	130109497	130109513	protein_coding	Idh3b	exon	ENSMUSG00000027406	ProperStrand	146	chr11	6428054	6428087	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.6959
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr5	118677942	118677958	protein_coding	Rnft2	intron	ENSMUSG00000032850	NonProperStrand	3	1	-14.9656
chr7	52338636	52338686	protein_coding	Rcn3	exon	ENSMUSG00000019539	ProperStrand	6	chr7	52560178	52560194	protein_coding	Trpm4	utr3	ENSMUSG00000038260	ProperStrand	161	1	-16.0647
chr11	84042523	84045163	protein_coding	Acaca	exon	ENSMUSG00000020532	ProperStrand	100	chr11	62416600	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-4.1869
chr9	75293200	75293276	protein_coding	Leo1	exon	ENSMUSG00000042487	ProperStrand	5	chr6	93765818	93862891	protein_coding	Magi1	intron	ENSMUSG00000045095	NonProperStrand	47	1	-19.2340
chr7	34942293	34942373	protein_coding	Uba2	exon	ENSMUSG00000052997	ProperStrand	165	chr7	117189975	117190065	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-1.6282
chr1	63224435	63225045	protein_coding	Eef1b2	exon	ENSMUSG00000025967	ProperStrand	106	chr19	8800361	8800451	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-2.5163
chr11	107510592	107517376	protein_coding	Helz	exon	ENSMUSG00000020721	ProperStrand	60	chr13	40982775	40982791	protein_coding	Gcnt2	exon	ENSMUSG00000021360	ProperStrand	31	1	-14.6401
chr4	131839454	131839470	protein_coding	Taf12	intron	ENSMUSG00000028899	ProperStrand	18	chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-10.1739
chr7	35435785	35435818	protein_coding	Kctd15	exon	ENSMUSG00000030499	ProperStrand	6	chr3	68889025	68889144	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-7.8444
chr19	10267460	10268213	protein_coding	Fads1	exon	ENSMUSG00000010663	ProperStrand	21	chr11	74718931	74718962	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	1	-11.1504
chr7	151676170	151676260	protein_coding	Ppfia1	intron	ENSMUSG00000037519	ProperStrand	32	chr4	131865899	131865979	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.8186
chr1	168082875	168087683	protein_coding	Gpa33	exon	ENSMUSG00000000544	ProperStrand	33	chr8	73419656	73419746	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	6	-inf
chr3	37007456	37007546	pseudogene	Gm12583	.	ENSMUSG00000082878	ProperStrand	1	chr9	120039542	120039622	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-inf
chr5	130295414	130295487	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	chr19	17900099	17900117	snoRNA	ENSMUSG00000089540_snoU13	.	ENSMUSG00000089540	ProperStrand	99	2	-7.1530
chr16	35658221	35658311	protein_coding-noncoding	Sema5b	utr5	ENSMUSG00000052133	NonProperStrand	1	chr16	35658474	35658564	protein_coding	Sema5b	intron	ENSMUSG00000052133	NonProperStrand	6	1	-inf
chr5	35251883	35251923	protein_coding	Htt	utr3	ENSMUSG00000029104	ProperStrand	73	chr4	131908809	131908891	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	14	-inf
chr12	3907662	3907762	protein_coding	Dnmt3a	utr3	ENSMUSG00000020661	ProperStrand	40	chr16	23110909	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.7072
chr3	88715213	88715230	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr6	52589226	52589260	snoRNA	ENSMUSG00000064792_SNORA32	.	ENSMUSG00000064792	ProperStrand	151	1	-5.4171
chr15	97685556	97685573	protein_coding	Vdr	utr3	ENSMUSG00000022479	ProperStrand	14	chr8	87340233	87340249	protein_coding	Dand5	exon	ENSMUSG00000053226	ProperStrand	34	1	-17.4416
chr16	83314281	83314301	LINE	Lx9	L1	chr16Lx983314103	NonProperStrand	1	chr1	135523655	135523701	protein_coding	Zc3h11a	exon	ENSMUSG00000026464	ProperStrand	102	1	-inf
chr2	26766544	26766582	protein_coding	Rpl7a	exon	ENSMUSG00000062647	ProperStrand	234	chr17	71990941	71990999	snoRNA	ENSMUSG00000092713_CT010429.1	.	ENSMUSG00000092713	ProperStrand	182	3	-18.8297
chr12	56156290	56156390	protein_coding-noncoding	2700097O09Rik	utr3	ENSMUSG00000062198	ProperStrand	1	chr9	95525001	95525032	snoRNA	ENSMUSG00000065346_SNORA4	.	ENSMUSG00000065346	ProperStrand	142	1	-inf
chr6	91685194	91689892	protein_coding	Slc6a6	exon	ENSMUSG00000030096	ProperStrand	206	chrX	34622906	34622949	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-1.1859
chr4	116826715	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	chr4	3762227	3762295	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	3	-7.8966
chrX	166427246	166427282	protein_coding	Mid1	utr3	ENSMUSG00000035299	ProperStrand	209	chr10	39978328	39978418	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-3.1075
chr14	76247756	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	chr13	49779702	49779803	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	4	-0.7934
chr2	104561644	104561674	SINE	B2_Mm2	B2	chr2B2_Mm2104561622	ProperStrand	1	chr19	44079677	44079693	protein_coding	Cyp2c44	utr3	ENSMUSG00000025197	NonProperStrand	21	1	-inf
chr9	122856351	122856367	protein_coding	1110059G10Rik	utr3	ENSMUSG00000032551	NonProperStrand	1	chr9	15119631	15119766	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-inf
chr2	76730586	76730604	protein_coding	Ttn	exon	ENSMUSG00000051747	ProperStrand	66	chr19	8799021	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-5.6456
chr3	40564296	40564312	protein_coding	Hspa4l	exon	ENSMUSG00000025757	NonProperStrand	10	chr19	8963106	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.6521
chr16	23110987	23111010	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr17	35299857	35299885	protein_coding	Prrc2a	exon	ENSMUSG00000024393	ProperStrand	315	2	-9.3313
chr17	57400829	57401094	protein_coding	Trip10	exon	ENSMUSG00000019487	ProperStrand	8	chr16	23110904	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.2180
chr17	46158701	46169314	protein_coding	Vegfa	intron	ENSMUSG00000023951	ProperStrand	43	chr1	162967512	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	4	-13.3143
chr17	35972397	35972452	protein_coding	Tubb5	exon	ENSMUSG00000001525	ProperStrand	624	chr11	11867679	11870432	protein_coding	Grb10	exon	ENSMUSG00000020176	NonProperStrand	159	1	-6.6892
chr11	68512892	68512944	protein_coding	Myh10	exon	ENSMUSG00000020900	ProperStrand	91	chr17	33954409	33954509	protein_coding	Kank3	exon	ENSMUSG00000042099	ProperStrand	64	1	-12.3462
chr2	19314954	19314972	protein_coding	Msrb2	exon	ENSMUSG00000023094	ProperStrand	4	chr14	76247724	76247825	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	NonProperStrand	16	1	-21.9369
chr11	74991832	74992433	protein_coding	Dph1	utr3	ENSMUSG00000078789	ProperStrand	6	chr10	23505165	23505255	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-5.3874
chr8	64017610	64028375	protein_coding	Palld	exon	ENSMUSG00000058056	NonProperStrand	125	chr1	162967515	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	5	-10.5314
chr17	6232006	6232022	protein_coding	Tulp4	exon	ENSMUSG00000034377	NonProperStrand	265	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-3.0422
chrX	160396313	160396329	protein_coding	Zrsr2	utr5	ENSMUSG00000031370	ProperStrand	57	chr17	39985628	39985661	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-6.0331
chr4	118809476	118809564	protein_coding	Slc2a1	utr3	ENSMUSG00000028645	ProperStrand	361	chr9	120037975	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-1.5574
chr4	21737937	21737961	protein_coding	Usp45	exon	ENSMUSG00000040455	ProperStrand	40	chr4	131866158	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	3	-10.6682
chr5	24101588	24101630	protein_coding	Smarcd3	exon	ENSMUSG00000028949	ProperStrand	3	chr16	23111456	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-12.1275
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr12	110889635	110889667	snoRNA	ENSMUSG00000064496_SNORD113	.	ENSMUSG00000064496	ProperStrand	37	1	-9.7635
chr7	112787526	112787589	protein_coding	Arfip2	exon	ENSMUSG00000030881	ProperStrand	191	chr9	15119731	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-0.8932
chr4	108689256	108689278	protein_coding	Nrd1	exon	ENSMUSG00000053510	ProperStrand	76	chr2	52549551	52549584	protein_coding	Stam2	utr3	ENSMUSG00000055371	ProperStrand	9	1	-16.7354
chr12	113042295	113042330	protein_coding	Klc1	intron	ENSMUSG00000021288	ProperStrand	35	chr2	166890504	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-8.6385
chr2	140081091	140082721	protein_coding	Sel1l2	exon	ENSMUSG00000074764	NonProperStrand	52	chr9	15119287	15119365	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	2	-8.8378
chrX	84483704	84483730	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-0.9192
chr17	41075733	41075799	protein_coding	Mut	exon	ENSMUSG00000023921	ProperStrand	20	chr19	8800375	8800465	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	4	-17.5595
chrX	132748867	132748909	protein_coding	Bex1	exon	ENSMUSG00000050071	ProperStrand	11	chr9	15119721	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-9.6817
chrX	20258535	20258609	protein_coding	Uba1	exon	ENSMUSG00000001924	ProperStrand	156	chr2	158182156	158182256	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-3.2084
chr11	93749513	93749546	protein_coding	Mbtd1	intron	ENSMUSG00000059474	ProperStrand	36	chr16	23111474	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.0295
chr6	124779681	124779771	protein_coding	Cdca3	utr5	ENSMUSG00000023505	NonProperStrand	2	chr6	124779336	124779426	protein_coding	Usp5	utr5	ENSMUSG00000038429	ProperStrand	35	1	-inf
chr11	52088410	52088428	protein_coding	Tcf7	intron	ENSMUSG00000000782	ProperStrand	24	chr1	88247751	88247778	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-6.9092
chr1	24621421	24621446	protein_coding	Gm10925	intron	ENSMUSG00000090378	ProperStrand	320	chr11	48616656	48616706	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	2	-9.7770
chr4	130377339	130377358	protein_coding	Sdc3	exon	ENSMUSG00000025743	ProperStrand	7	chr19	48027696	48027713	protein_coding	Ccdc147	intron	ENSMUSG00000046585	ProperStrand	15	1	-21.2664
chr11	68716753	68716769	protein_coding	Rpl26	exon	ENSMUSG00000060938	ProperStrand	130	chr9	15119288	15119397	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	6	-18.2038
chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	chr17	35087914	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-1.4549
chr4	107430049	107430066	lincRNA	1700047F07Rik	intron	ENSMUSG00000085549	ProperStrand	7	chr10	23505193	23505232	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-5.0629
chr16	90243438	90244505	protein_coding	Scaf4	exon	ENSMUSG00000022983	ProperStrand	44	chr3	68889088	68889188	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-3.8295
chr1	174002275	174002375	protein_coding	Ncstn	exon	ENSMUSG00000003458	ProperStrand	20	chr9	15118337	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-9.1745
chr3	57800985	57801075	LINE	L1_Mm	L1	chr3L1_Mm57800960	NonProperStrand	1	chr7	150717344	150717424	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-inf
chr8	10924953	10924969	protein_coding	3930402G23Rik	utr3	ENSMUSG00000038917	ProperStrand	13	chr7	116663667	116663767	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-5.3924
chr17	26360444	26360463	protein_coding	Itfg3	intron	ENSMUSG00000024187	NonProperStrand	4	chr11	6428105	6428154	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-8.6824
chr7	117425067	117425116	protein_coding	Swap70	utr3	ENSMUSG00000031015	ProperStrand	47	chr17	24857278	24857319	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	1	-10.1446
chr11	48615252	48615311	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	chr18	75161143	75161173	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	1	-5.5476
chr1	65217778	65217800	protein_coding	Idh1	exon	ENSMUSG00000025950	ProperStrand	17	chr11	51551332	51551422	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	2	-16.2002
chr11	62416574	62416602	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr7	116663636	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	7	-2.8417
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr18	34969001	34969101	protein_coding	Kdm3b	exon	ENSMUSG00000038773	ProperStrand	80	1	-4.4022
chr13	60416443	60416523	LTR	RMER12	ERVK	chr13RMER1260416351	NonProperStrand	1	chr6	146104856	146104946	protein_coding	Itpr2	intron	ENSMUSG00000030287	ProperStrand	20	1	-inf
chr15	37936225	37936242	protein_coding	Ubr5	exon	ENSMUSG00000037487	ProperStrand	258	chr18	82662186	82662202	protein_coding	Mbp	intron	ENSMUSG00000041607	NonProperStrand	185	1	-8.1367
chr4	140757657	140757679	protein_coding	Fbxo42	utr3	ENSMUSG00000028920	NonProperStrand	4	chr17	24702752	24702805	protein_coding	Pkd1	exon	ENSMUSG00000032855	ProperStrand	61	1	-18.4825
chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	chr9	114498742	114498782	protein_coding	Cnot10	intron	ENSMUSG00000056167	ProperStrand	16	1	-13.1643
chr1	65156667	65156711	protein_coding	D630023F18Rik	intron	ENSMUSG00000044816	ProperStrand	6	chr16	23110911	23111005	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.7876
chr4	132805923	132805940	protein_coding	Map3k6	exon	ENSMUSG00000028862	ProperStrand	3	chr12	55797813	55797928	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	1	-14.0652
chr17	60144534	60144551	LTR	ORR1D1-int	MaLR	chr17ORR1D1-int60144145	ProperStrand	1	chr7	52382755	52382830	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-inf
chr9	108748137	108748248	protein_coding	Celsr3	exon	ENSMUSG00000023473	ProperStrand	31	chr18	35714145	35714235	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.6912
chr1	133141328	133141345	protein_coding	Rassf5	exon	ENSMUSG00000026430	ProperStrand	73	chr17	24856618	24856736	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	3	-13.8913
chr4	133088458	133088558	protein_coding	Nudc	utr3	ENSMUSG00000028851	ProperStrand	80	chr9	15118533	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	1	-8.7652
chr18	39309751	39387053	protein_coding	Arhgap26	exon	ENSMUSG00000036452	ProperStrand	46	chr19	8963096	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.7301
chr14	122078083	122078101	protein_coding	Dock9	intron	ENSMUSG00000025558	ProperStrand	38	chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-7.3636
chr11	115935746	115937022	protein_coding	Unc13d	exon	ENSMUSG00000057948	ProperStrand	89	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.1955
chr1	162967490	162967550	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	chr17	71980664	71980680	snoRNA	ENSMUSG00000093289_Snord92	.	ENSMUSG00000093289	ProperStrand	56	2	-6.1184
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr8	77651145	77651186	protein_coding	Mcm5	exon	ENSMUSG00000005410	ProperStrand	199	1	-2.7330
chr4	21606097	21606114	protein_coding	Prdm13	exon	ENSMUSG00000040478	ProperStrand	51	chr16	23111433	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-4.3965
mmu-miR-5100	5	20	miRNA	mmu-miR-5100	.	mmu-miR-5100	ProperStrand	132	chr18	35716684	35716806	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.0106
chr16	30660363	30660453	LTR	MLT1G3	MaLR	chr16MLT1G330660293	NonProperStrand	1	chr16	30659978	30660068	LTR	ORR1B2	MaLR	chr16ORR1B230659915	ProperStrand	1	1	-inf
chr6	144948398	144948437	protein_coding	Bcat1	utr3	ENSMUSG00000030268	ProperStrand	49	chr4	131865858	131865948	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.0906
chr7	48780516	48780533	LTR	RMER13A	ERVK	chr7RMER13A48780447	ProperStrand	15	chr5	121655100	121655154	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-6.4555
chr15	81110991	81111009	SINE	ID4	ID	chr15ID481110956	ProperStrand	272	chr14	76247711	76247753	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-1.5597
chr5	114814808	114814859	protein_coding	Kctd10	utr3	ENSMUSG00000001098	ProperStrand	3	chr19	8963073	8963163	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-8.3179
chr8	11427556	11427572	protein_coding	Col4a2	exon	ENSMUSG00000031503	ProperStrand	74	chr5	117724240	117724261	protein_coding	Taok3	utr3	ENSMUSG00000061288	ProperStrand	28	1	-14.4364
chr13	9833551	9833620	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr9	107517347	107522381	protein_coding	Gnai2	utr3	ENSMUSG00000032562	ProperStrand	29	3	-14.6758
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	4332817	4332834	protein_coding	Kdm2a	intron	ENSMUSG00000054611	NonProperStrand	5	1	-9.5409
chr11	119136228	119136244	protein_coding	Gaa	exon	ENSMUSG00000025579	NonProperStrand	201	chr15	71624756	71624797	snoRNA	ENSMUSG00000088895_SNORA81	.	ENSMUSG00000088895	ProperStrand	348	1	-7.3784
chr6	124791245	124791261	protein_coding	Leprel2	utr3	ENSMUSG00000023191	ProperStrand	44	chr8	73419654	73419741	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.6992
chr18	48207224	48207271	protein_coding	Gm5506	exon	ENSMUSG00000059040	ProperStrand	105	chr11	116938707	116938747	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	3	-11.9015
chr1	92689614	92689630	protein_coding	Col6a3	exon	ENSMUSG00000048126	ProperStrand	79	chr12	17553062	17553089	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-4.5592
chr14	20974074	20974104	protein_coding	Kcnk5	intron	ENSMUSG00000023243	ProperStrand	29	chr9	4299367	4302483	protein_coding	Aasdhppt	exon	ENSMUSG00000025894	ProperStrand	121	1	-13.3740
chr16	24984504	24984520	protein_coding	Lpp	utr3	ENSMUSG00000033306	NonProperStrand	189	chr8	98269970	98270084	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	2	-5.7370
chr6	29373134	29373234	protein_coding	Ccdc136	intron	ENSMUSG00000029769	ProperStrand	19	chr16	23111453	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.1411
chr18	73693113	73693146	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr7	52382275	52382314	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-1.1441
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr11	94462966	94463042	protein_coding	Acsf2	exon	ENSMUSG00000076435	ProperStrand	34	1	-7.5008
chr2	90235315	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	137621039	137621056	lincRNA	Gm14064	intron	ENSMUSG00000085640	ProperStrand	10	1	-8.0457
chr2	30299219	30299309	protein_coding	Ppp2r4	intron	ENSMUSG00000039515	ProperStrand	76	chr18	35714167	35714247	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-3.0149
chr7	85936545	85936605	protein_coding	Mrps11	intron	ENSMUSG00000030611	ProperStrand	2	chr19	8963074	8963164	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-9.4105
chr1	181027187	181027205	protein_coding	Smyd3	intron	ENSMUSG00000055067	ProperStrand	231	chr12	17552949	17553030	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	2	-4.5455
chr6	115757992	115758083	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	NonProperStrand	4	chr4	131865855	131865917	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	NonProperStrand	39	1	-18.3828
chr2	31529065	31529090	protein_coding	Exosc2	intron	ENSMUSG00000039356	ProperStrand	39	chr18	35714146	35714236	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.2497
chr7	152049192	152049249	protein_coding	Fgf4	utr3	ENSMUSG00000050917	ProperStrand	66	chr5	122691914	122691930	protein_coding	Hvcn1	utr3	ENSMUSG00000064267	ProperStrand	182	1	-10.8955
chr17	56257328	56257344	LTR	RLTR25B	ERVK	chr17RLTR25B56257276	NonProperStrand	75	chr7	148634701	148634760	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-3.5704
chr10	90581034	90581124	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	chr5	108334196	108334276	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	15	-3.2195
chr17	57160857	57160895	protein_coding	Khsrp	utr3	ENSMUSG00000007670	ProperStrand	353	chr15	84101747	84103941	protein_coding	Parvb	exon	ENSMUSG00000022438	ProperStrand	127	1	-8.2625
chr4	137813143	137813162	protein_coding	Sh2d5	exon	ENSMUSG00000045349	NonProperStrand	31	chr10	110918552	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-7.8118
chr17	35822057	35822257	protein_coding	Ddr1	exon	ENSMUSG00000003534	ProperStrand	129	chr14	76247762	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-2.7728
chr18	68003569	68003587	protein_coding	Cep192	intron	ENSMUSG00000024542	NonProperStrand	16	chr5	147922396	147922435	protein_coding	Polr1d	exon	ENSMUSG00000029642	ProperStrand	23	1	-17.9219
chr17	45704136	45704154	protein_coding	Slc35b2	exon	ENSMUSG00000037089	ProperStrand	55	chr17	62956666	62956683	protein_coding	Efna5	utr3	ENSMUSG00000048915	NonProperStrand	32	1	-14.7563
chr11	4983443	4983537	protein_coding	Ewsr1	exon	ENSMUSG00000009079	ProperStrand	248	chr3	107416338	107417513	protein_coding	Fam40a	exon	ENSMUSG00000014601	ProperStrand	18	9	-19.0196
chr4	131908357	131908464	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr7	112895514	112895530	protein_coding	Tpp1	exon	ENSMUSG00000030894	NonProperStrand	25	1	-9.0195
chr10	5489610	5489626	protein_coding	Esr1	exon	ENSMUSG00000019768	ProperStrand	18	chr8	73419657	73419723	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-5.4264
chr13	117250854	117250872	SINE	ID_B1	B4	chr13ID_B1117250703	ProperStrand	4	chr15	5067381	5067628	protein_coding	Rpl37	exon	ENSMUSG00000041841	ProperStrand	69	1	-18.5572
chr11	95823835	95823932	protein_coding	Igf2bp1	utr3	ENSMUSG00000013415	ProperStrand	140	chr19	8799869	8799893	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-3.3520
chr11	49699417	49699435	protein_coding	Mapk9	utr3	ENSMUSG00000020366	ProperStrand	20	chr10	39978417	39978485	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	2	-12.2963
chr16	20661643	20661702	protein_coding	Psmd2	exon	ENSMUSG00000006998	ProperStrand	99	chr1	162967544	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-2.5815
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr8	93648054	93648105	protein_coding	Aktip	utr3	ENSMUSG00000031667	ProperStrand	13	1	-11.0825
mmu-miR-2137	1	20	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	chr10	80809668	80809684	protein_coding	Hmg20b	exon	ENSMUSG00000020232	ProperStrand	157	1	-9.6268
chr8	44263121	44263170	LINE	Lx2	L1	chr8Lx244262934	NonProperStrand	1	chr10	110918596	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-inf
chr7	5062341	5062360	protein_coding	Rfpl4	exon	ENSMUSG00000035191	NonProperStrand	27	chr11	69481331	69481422	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-7.8290
chr2	158185564	158185654	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr11	55296215	55296332	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	8	-8.2399
chr10	14480344	14480361	protein_coding	Nmbr	exon	ENSMUSG00000019865	ProperStrand	2	chr8	98395793	98395854	protein_coding	Got2	exon	ENSMUSG00000031672	ProperStrand	85	1	-inf
chr5	118459830	118459920	protein_coding	Fbxo21	utr3	ENSMUSG00000032898	ProperStrand	34	chr2	26494756	26494836	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.1609
chr2	72319920	72319970	protein_coding	Cdca7	exon	ENSMUSG00000055612	ProperStrand	22	chr1	63225596	63225686	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-8.6827
chr2	90235296	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	45488603	45488620	protein_coding	Col5a2	intron	ENSMUSG00000026042	ProperStrand	184	2	-4.2813
chr1	137338157	137338182	protein_coding	Nav1	utr3	ENSMUSG00000009418	ProperStrand	38	chr10	23505202	23505279	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.9123
chr17	45707468	45707625	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr18	73693122	73693148	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	2	-0.7750
chr15	36530370	36530420	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-1.9357
chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	3	-12.5476
chr1	94753674	94753826	protein_coding	Gpc1	exon	ENSMUSG00000034220	ProperStrand	30	chr4	131908806	131908896	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.2894
chr6	57599745	57599762	protein_coding	Herc6	intron	ENSMUSG00000029798	ProperStrand	7	chr11	62416600	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-9.5351
chr13	23790022	23790073	protein_coding	Hist1h4c	exon	ENSMUSG00000060678	ProperStrand	19	chr19	12086442	12086496	tRNA	tRNA109-ValTAC	.	1543532	ProperStrand	96	1	-14.7067
chr6	91122257	91123052	protein_coding	Hdac11	exon	ENSMUSG00000034245	ProperStrand	3	chr1	88247748	88247828	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-11.4044
chr16	57391626	57391787	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr10	23505151	23505235	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	NonProperStrand	45	6	-20.2915
chr4	148494379	148494397	protein_coding	Dffa	utr3	ENSMUSG00000028974	ProperStrand	55	chr15	98350140	98350253	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	6	-19.4132
chr7	139528173	139528190	protein_coding	Fgfr2	intron	ENSMUSG00000030849	ProperStrand	100	chr2	20706877	20706993	protein_coding	Etl4	exon	ENSMUSG00000036617	ProperStrand	86	1	-11.5634
chr9	26440743	26440759	DNA	MER5A	MER1_type	chr9MER5A26440741	ProperStrand	108	chr6	140475368	140475391	protein_coding	Plekha5	intron	ENSMUSG00000030231	NonProperStrand	2	1	-19.8743
chr9	96101487	96101544	protein_coding	Tfdp2	intron	ENSMUSG00000032411	ProperStrand	95	chr17	39985369	39985398	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	2	-8.2926
chr1	89607547	89607582	protein_coding	Inpp5d	intron	ENSMUSG00000026288	ProperStrand	75	chr7	104054544	104054560	protein_coding	Odz4	exon	ENSMUSG00000048078	ProperStrand	93	1	-11.9840
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr15	76174850	76174893	protein_coding	Cyc1	exon	ENSMUSG00000022551	ProperStrand	47	1	-9.2812
chr5	124252101	124252269	protein_coding	Kntc1	exon	ENSMUSG00000029414	ProperStrand	27	chr8	13933760	13933777	protein_coding	Fbxo25	intron	ENSMUSG00000038365	ProperStrand	7	1	-inf
chr19	8799022	8799086	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	chr9	64024489	64024567	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	1	-1.4182
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr7	116664807	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-2.0205
chr8	87426786	87426804	protein_coding	Klf1	exon	ENSMUSG00000054191	NonProperStrand	70	chr7	117189863	117189975	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.0537
chr16	37384897	37384913	protein_coding	Stxbp5l	utr5	ENSMUSG00000022829	ProperStrand	332	chr15	79908957	79908984	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-2.3177
chr5	109124122	109132306	protein_coding	Fgfrl1	exon	ENSMUSG00000008090	ProperStrand	111	chr11	120844637	120852260	protein_coding	Csnk1d	exon	ENSMUSG00000025162	ProperStrand	37	1	-13.0553
chr1	136305007	136306182	protein_coding	Cyb5r1	exon	ENSMUSG00000026456	ProperStrand	12	chr1	82653436	82653452	protein_coding	Col4a3	exon	ENSMUSG00000079465	ProperStrand	99	1	-15.5950
chr6	131330290	131330425	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	ProperStrand	408	chr9	15118259	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-1.2436
chr19	18687745	18687789	protein_coding	Ostf1	intron	ENSMUSG00000024725	ProperStrand	8	chr1	34258074	34258155	protein_coding	Dst	utr5	ENSMUSG00000026131	ProperStrand	461	5	-19.3920
chr8	58589363	58589379	protein_coding	Glra3	exon	ENSMUSG00000038257	ProperStrand	9	chr7	109300838	109300860	protein_coding	Nup98	exon	ENSMUSG00000063550	ProperStrand	100	1	-16.2001
chr2	173936843	173936975	protein_coding	Npepl1	intron	ENSMUSG00000039263	ProperStrand	5	chr7	52382082	52382102	protein_coding	Rpl13a	exon	ENSMUSG00000074129	ProperStrand	269	1	-15.4634
chr15	103028216	103028296	protein_coding	Cbx5	utr3	ENSMUSG00000009575	ProperStrand	98	chr8	73419657	73419747	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	7	-16.2530
chr1	88255782	88255798	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chr2	158184092	158184199	snoRNA	ENSMUSG00000064995_SNORA71	.	ENSMUSG00000064995	ProperStrand	430	7	-19.2513
chr9	42251088	42251122	protein_coding	Tbcel	exon	ENSMUSG00000037287	ProperStrand	15	chr16	23111690	23111760	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.3973
chr2	79132657	79132674	protein_coding-noncoding	Itga4	utr5	ENSMUSG00000027009	NonProperStrand	118	chr3	95144097	95144113	protein_coding	Setdb1	exon	ENSMUSG00000015697	NonProperStrand	4	1	-17.6699
chr1	82679326	82679342	protein_coding	Col4a3	exon	ENSMUSG00000079465	ProperStrand	99	chrX	34622991	34623037	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-4.0865
chr10	80134559	80134725	protein_coding	Mknk2	utr5	ENSMUSG00000020190	ProperStrand	18	chr4	131908239	131908297	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.4481
chr7	142888403	142888462	protein_coding	Mki67	exon	ENSMUSG00000031004	ProperStrand	286	chr16	23111421	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	7	-2.0128
chr11	69483194	69483237	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	chr11	98572310	98572363	snoRNA	ENSMUSG00000088169_SNORD124	.	ENSMUSG00000088169	ProperStrand	62	1	-2.3941
chr9	117956581	117956630	protein_coding	Azi2	exon	ENSMUSG00000039285	ProperStrand	12	chr16	23109027	23109043	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	3	-20.1864
chr2	179317854	179317870	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr9	15119631	15119693	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.0285
chr18	89278704	89280091	protein_coding	Rttn	exon	ENSMUSG00000023066	ProperStrand	19	chr7	148634807	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	4	-inf
chr5	15510862	15510878	protein_coding	Cacna2d1	intron	ENSMUSG00000040118	NonProperStrand	13	chr4	131865916	131865977	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.5141
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr18	35102297	35102368	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	5	-1.1063
chr7	29583602	29583654	protein_coding	Rinl	utr3	ENSMUSG00000051735	ProperStrand	10	chr15	34370577	34370667	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-7.0767
chr15	81744112	81744236	protein_coding	Aco2	exon	ENSMUSG00000022477	ProperStrand	237	chr16	98079249	98079266	protein_coding	C2cd2	utr3	ENSMUSG00000045975	ProperStrand	9	1	-14.4452
chrX	58225380	58225396	pseudogene	Rpl7l1-ps1	.	ENSMUSG00000081323	ProperStrand	46	chr6	71832577	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-6.1339
chr10	81023469	81023528	protein_coding	Aes	intron	ENSMUSG00000054452	ProperStrand	34	chr17	6491833	6491850	protein_coding	Gm2792	intron	ENSMUSG00000079735	ProperStrand	12	1	-17.5675
chr13	100200481	100200574	protein_coding	Mtap1b	exon	ENSMUSG00000052727	ProperStrand	76	chr11	69483136	69483190	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.0566
chrX	156315497	156315519	protein_coding	Sh3kbp1	intron	ENSMUSG00000040990	ProperStrand	67	chr10	23505152	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-3.4353
chr12	31975135	31975152	protein_coding	Lamb1	intron	ENSMUSG00000002900	NonProperStrand	45	chr16	23111382	23111466	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.6772
chr12	60141423	60141508	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	chr19	8799829	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	4	-1.4961
chr17	53646403	53646466	protein_coding	Rab5a	utr3	ENSMUSG00000017831	ProperStrand	44	chr7	116663634	116663696	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	4	-10.5868
chr18	6202470	6202533	protein_coding	Kif5b	utr3	ENSMUSG00000006740	ProperStrand	65	chr16	23111694	23111784	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.7776
chr4	149430424	149430456	lincRNA	Gm13067	intron	ENSMUSG00000086665	ProperStrand	8	chr7	118219574	118219691	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	4	-19.3347
chr2	179910066	179910308	protein_coding	Adrm1	exon	ENSMUSG00000039041	ProperStrand	27	chr7	148634774	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-9.0794
chrX	12675717	12746812	protein_coding	Usp9x	utr3	ENSMUSG00000031010	ProperStrand	174	chr4	131908238	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	5	-2.8580
chr19	27473459	27473484	protein_coding	D19Bwg1357e	exon	ENSMUSG00000041360	ProperStrand	110	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-5.7873
chr12	70782772	70782847	protein_coding	Sos2	utr5	ENSMUSG00000034801	ProperStrand	11	chr7	110114018	110114034	protein_coding	Olfr576	exon	ENSMUSG00000073962	NonProperStrand	79	1	-16.2237
chr9	78023109	78023148	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr10	59762534	59762634	protein_coding	Psap	exon	ENSMUSG00000004207	ProperStrand	124	1	-4.4717
chr17	29230601	29230620	protein_coding	Cdkn1a	intron	ENSMUSG00000023067	NonProperStrand	11	chr16	57045217	57045234	protein_coding	2310005G13Rik	intron	ENSMUSG00000046748	NonProperStrand	5	1	-19.4286
chr8	122429885	122429903	SINE	B1_Mur4	Alu	chr8B1_Mur4122429833	NonProperStrand	12	chr15	58577335	58577351	protein_coding	Fer1l6	intron	ENSMUSG00000037106	ProperStrand	54	1	-16.8494
chr11	104150228	104150277	protein_coding	Mapt	intron	ENSMUSG00000018411	NonProperStrand	11	chr2	26493395	26493485	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-7.0863
chr4	152856778	152856794	protein_coding	Ajap1	utr5	ENSMUSG00000039546	ProperStrand	51	chr19	8963032	8963048	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-10.4828
chr11	119936983	119937012	protein_coding	Azi1	exon	ENSMUSG00000039781	ProperStrand	24	chr12	17552960	17553031	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	3	-15.7374
chr7	52382138	52382368	protein_coding	Rpl13a	exon	ENSMUSG00000074129	ProperStrand	269	chr13	23528224	23528284	tRNA	tRNA103-LysCTT	.	676315	ProperStrand	180	1	-8.1083
chr10	110372312	110374832	protein_coding	Csrp2	exon	ENSMUSG00000020186	ProperStrand	24	chr11	97642952	97642992	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.1417
chr19	15979977	15979995	protein_coding	Psat1	utr3	ENSMUSG00000024640	ProperStrand	33	chr9	15119287	15119375	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-6.2841
chr2	162900046	162900146	protein_coding	Mybl2	intron	ENSMUSG00000017861	ProperStrand	230	chr5	65952377	65952395	protein_coding	Ube2k	intron	ENSMUSG00000029203	ProperStrand	289	7	-19.1200
chr15	75901215	75901297	protein_coding	Puf60	exon	ENSMUSG00000002524	ProperStrand	18	chr1	60041080	60041155	protein_coding	Fam117b	utr3	ENSMUSG00000041040	ProperStrand	31	6	-18.6104
chr14	68294919	68294959	protein_coding	Cdca2	exon	ENSMUSG00000048922	ProperStrand	50	chr11	62416592	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-5.5221
chr6	47738107	47738130	misc_RNA	Y_RNA	.	ENSMUSG00000065701	ProperStrand	129	chr9	15118332	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-2.1302
chr2	30163139	30163219	protein_coding	Nup188	exon	ENSMUSG00000052533	ProperStrand	96	chr15	79908929	79909019	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-4.5640
chr7	148634720	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	chr11	6520321	6520444	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	3	-0.8085
chr4	135605904	135606257	protein_coding	Rpl11	exon	ENSMUSG00000059291	ProperStrand	152	chr2	130101994	130102074	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-3.5892
chr19	32897598	32897620	protein_coding	Pten	utr3	ENSMUSG00000013663	ProperStrand	20	chr11	74718931	74718959	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	1	-11.2502
chr16	37384897	37384913	protein_coding	Stxbp5l	utr5	ENSMUSG00000022829	ProperStrand	332	chr4	131399490	131399506	protein_coding	Mecr	exon	ENSMUSG00000028910	NonProperStrand	109	1	-8.6894
chr2	91613185	91613203	protein_coding	Ambra1	exon	ENSMUSG00000040506	ProperStrand	65	chr10	23506278	23506343	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-6.7885
chr4	3762671	3762741	protein_coding	Rps20	utr5	ENSMUSG00000028234	ProperStrand	71	chr10	23505194	23505284	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.0125
chr15	103333532	103333549	protein_coding	Pde1b	utr5	ENSMUSG00000022489	ProperStrand	19	chr2	180410031	180418522	protein_coding	Dido1	exon	ENSMUSG00000038914	ProperStrand	81	1	-15.0453
chr2	104500818	104503523	protein_coding	Cstf3	exon	ENSMUSG00000027176	ProperStrand	19	chr9	120038024	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-6.9787
chr7	148072627	148072700	protein_coding-noncoding	Psmd13	utr5	ENSMUSG00000025487	ProperStrand	5	chr7	116664816	116664909	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	5	-inf
chrX	34337262	34337307	protein_coding	Slc25a5	exon	ENSMUSG00000016319	ProperStrand	55	chr11	6519839	6519929	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-8.1167
chr3	85448965	85456213	protein_coding	Pet112l	exon	ENSMUSG00000028085	ProperStrand	81	chr17	35089181	35089231	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-4.9025
chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr9	66346490	66346546	protein_coding	Herc1	exon	ENSMUSG00000038664	ProperStrand	81	3	-13.5255
chr17	27717739	27717823	protein_coding	Nudt3	exon	ENSMUSG00000024213	ProperStrand	26	chr8	13416896	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	3	-18.1288
chr17	83402943	83403033	LTR	RMER13A	ERVK	chr17RMER13A83402383	ProperStrand	1	chr14	104216230	104216320	protein_coding	Ednrb	utr3	ENSMUSG00000022122	NonProperStrand	2	1	-inf
chr18	63263590	63263607	protein_coding	Fam38b	intron	ENSMUSG00000041482	NonProperStrand	50	chr17	13112530	13112549	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-4.9312
chr3	108357254	108357379	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	chr4	3762227	3762260	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	1	-1.2698
chr10	68113804	68113820	SINE	PB1D10	Alu	chr10PB1D1068113752	NonProperStrand	1	chr11	116939005	116939100	lincRNA	2810008D09Rik	intron	ENSMUSG00000086859	ProperStrand	6	1	-inf
chr4	58866584	58866600	protein_coding	AI314180	exon	ENSMUSG00000050812	ProperStrand	19	chr19	8800085	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-9.9305
chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	chr4	131865394	131865441	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-0.7323
chr4	40692577	40695609	protein_coding	Smu1	exon	ENSMUSG00000028409	ProperStrand	23	chr4	131908236	131908299	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.9964
chr5	74489543	74489563	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr3	137849424	137849440	protein_coding	4930579F01Rik	utr5	ENSMUSG00000012042	NonProperStrand	156	1	-3.7933
chr8	87568799	87568927	protein_coding	Tnpo2	exon	ENSMUSG00000031691	ProperStrand	92	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.6774
chr8	125627218	125627252	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	chr4	122970453	122970526	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-4.7729
chr12	110888878	110888912	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr9	78023109	78023150	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	4	-6.6355
chr18	80326988	80327029	protein_coding	Adnp2	exon	ENSMUSG00000053950	ProperStrand	36	chr16	43886799	43886879	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	2	-14.4404
chr16	18283302	18283319	protein_coding	Dgcr8	exon	ENSMUSG00000022718	ProperStrand	67	chr10	23505560	23505626	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-7.3301
chr6	52965701	52965718	protein_coding	Jazf1	intron	ENSMUSG00000063568	ProperStrand	43	chr2	22444750	22444773	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-8.4439
chr1	65118230	65118247	protein_coding	Crygc	exon	ENSMUSG00000025952	ProperStrand	12	chr7	133938964	133939023	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	2	-18.4124
chr8	87433290	87433370	protein_coding-noncoding	Dnase2a	utr5	ENSMUSG00000003812	ProperStrand	4	chr8	87433413	87433503	protein_coding	Dnase2a	exon	ENSMUSG00000003812	ProperStrand	8	1	-19.3161
chr10	66494185	66494275	protein_coding	Reep3	intron	ENSMUSG00000019873	ProperStrand	11	chr18	35716789	35716869	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-5.3336
chr7	20243919	20244009	protein_coding	Clptm1	intron	ENSMUSG00000002981	ProperStrand	109	chr10	23505200	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-1.1727
chr1	92013977	92013994	protein_coding	Iqca	intron	ENSMUSG00000026301	NonProperStrand	2	chr10	62342779	62342869	protein_coding	Tet1	utr5	ENSMUSG00000047146	ProperStrand	286	1	-17.8029
chr18	86652679	86652696	protein_coding	Neto1	intron	ENSMUSG00000050321	NonProperStrand	8	chr7	52713391	52713434	protein_coding	Ftl1	utr3	ENSMUSG00000050708	ProperStrand	807	1	-12.2480
chr10	83106775	83106865	protein_coding	Appl2	intron	ENSMUSG00000020263	ProperStrand	15	chr12	106269345	106269425	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-6.8702
chr8	87370698	87370724	protein_coding	Calr	utr5	ENSMUSG00000003814	ProperStrand	232	chr10	62802344	62802360	protein_coding	Sirt1	intron	ENSMUSG00000020063	NonProperStrand	116	1	-9.2793
chr7	13516163	13516209	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr1	162965551	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	4	-1.5884
chr4	46554809	46554826	protein_coding	Coro2a	exon	ENSMUSG00000028337	NonProperStrand	24	chr4	131865875	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.3401
chr2	164776206	164776224	protein_coding-noncoding	Mmp9	utr5	ENSMUSG00000017737	NonProperStrand	9	chr7	150717306	150717424	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-9.3491
chr14	60998023	60998039	protein_coding	Fam123a	exon	ENSMUSG00000021986	ProperStrand	13	chr12	60141443	60141509	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-9.9265
chr5	117706010	117713602	protein_coding	Taok3	exon	ENSMUSG00000061288	ProperStrand	28	chr4	131908814	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.4067
chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr11	106362671	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-1.1877
chr11	97642978	97643078	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	chr9	85366456	85366479	snoRNA	ENSMUSG00000065274_SNORA42	.	ENSMUSG00000065274	ProperStrand	6	1	-6.9580
chr4	148312885	148312901	protein_coding	Casz1	exon	ENSMUSG00000028977	ProperStrand	27	chr1	36759404	36763722	protein_coding	Actr1b	exon	ENSMUSG00000037351	ProperStrand	14	1	-18.0026
chr5	123689426	123689450	protein_coding	Psmd9	intron	ENSMUSG00000029440	ProperStrand	2	chr11	33055147	33055216	protein_coding	Npm1	utr3	ENSMUSG00000057113	ProperStrand	352	1	-17.3153
chr13	23714050	23714152	protein_coding	Hist1h1e	exon	ENSMUSG00000051627	ProperStrand	41	chr17	24665464	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-5.6838
chr1	154106900	154106919	LTR	MLT1H1	MaLR	chr1MLT1H1154106888	NonProperStrand	4	chr14	76247754	76247843	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	4	-inf
chr8	98269959	98270076	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	chr3	88497889	88497979	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	2	-1.3909
chr5	108336372	108336490	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	chr13	23392005	23392024	tRNA	tRNA97-ValCAC	.	476141	ProperStrand	52	1	-5.1583
chr9	111108317	111116646	protein_coding	Lrrfip2	exon	ENSMUSG00000032497	ProperStrand	28	chr18	35716764	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	9	-20.3107
chr17	13115655	13115767	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	chr2	130101257	130101310	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	7	-11.7336
chr2	79132657	79132674	protein_coding-noncoding	Itga4	utr5	ENSMUSG00000027009	NonProperStrand	118	chr15	79912896	79912956	protein_coding	Rpl3	exon	ENSMUSG00000060036	ProperStrand	8342	1	-2.3917
chr9	66305355	66306011	protein_coding	Herc1	exon	ENSMUSG00000038664	ProperStrand	81	chr5	121655017	121655125	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.1969
chr5	115940291	115940407	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	chr3	123210853	123210981	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	17	-9.7473
chr10	79173537	79173596	protein_coding	Bsg	exon	ENSMUSG00000023175	ProperStrand	107	chr3	84995363	84995380	protein_coding	Arfip1	intron	ENSMUSG00000074513	NonProperStrand	56	1	-12.2909
chr8	3505921	3507183	protein_coding	Mcoln1	exon	ENSMUSG00000004567	ProperStrand	15	chr12	114267820	114267836	protein_coding	Pacs2	intron	ENSMUSG00000021143	NonProperStrand	302	1	-12.8962
chr19	38869531	38869547	protein_coding	Noc3l	exon	ENSMUSG00000024999	NonProperStrand	149	chr18	35714219	35714246	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-1.8783
chr4	107596083	107596100	protein_coding	Cpt2	utr5	ENSMUSG00000028607	NonProperStrand	106	chr9	120038466	120038526	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.0648
chr12	68768931	68769011	LINE	L1Md_F2	L1	chr12L1Md_F268768613	NonProperStrand	12	chr16	61882932	61883022	LINE	L1Md_F3	L1	chr16L1Md_F361882425	NonProperStrand	1	1	-inf
chr6	128193485	128196837	protein_coding	Tead4	exon	ENSMUSG00000030353	ProperStrand	14	chr8	73419657	73419698	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-5.9313
chr11	60591674	60591735	protein_coding	Smcr8	exon	ENSMUSG00000049323	ProperStrand	46	chr4	122968679	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-6.8076
chr19	5652097	5652738	protein_coding	Sipa1	exon	ENSMUSG00000056917	ProperStrand	14	chr16	23110473	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-12.4219
chr13	100194172	100194205	protein_coding	Mtap1b	utr3	ENSMUSG00000052727	ProperStrand	76	chr9	15119665	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-6.0135
chr1	64782256	64782356	protein_coding	Fzd5	exon	ENSMUSG00000045005	ProperStrand	175	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-6.0379
chr11	48615261	48615325	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	chr15	34370545	34370618	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	5	-5.3723
chr5	143755234	143777376	protein_coding	Rnf216	exon	ENSMUSG00000045078	ProperStrand	38	chr8	129468784	129468864	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-5.2970
chr10	127178640	127178730	protein_coding	Zbtb39	exon	ENSMUSG00000044617	ProperStrand	9	chr17	24857721	24857801	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-5.8950
chr16	5256015	5256031	protein_coding	Fam86	utr5	ENSMUSG00000022544	ProperStrand	231	chr17	46806859	46806958	protein_coding	Rrp36	exon	ENSMUSG00000023971	ProperStrand	4	1	-16.3004
chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	chr8	129468746	129468798	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-1.0375
chr11	62416575	62416602	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr14	51427290	51427336	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	2	-5.2562
chr13	23852872	23852962	protein_coding	Hist1h4a	exon	ENSMUSG00000060093	ProperStrand	12	chr18	35716755	35716835	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-5.1577
chr1	162967491	162967529	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	chr1	87983939	87983997	snoRNA	ENSMUSG00000077274_SNORA26	.	ENSMUSG00000077274	ProperStrand	361	2	-1.4741
chr4	22414139	22414155	protein_coding	Pou3f2	exon	ENSMUSG00000052621	NonProperStrand	90	chr15	79908955	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	3	-11.1367
chr16	35478049	35478139	protein_coding	Pdia5	intron	ENSMUSG00000022844	ProperStrand	26	chr4	137214062	137214142	protein_coding	Usp48	utr3	ENSMUSG00000043411	ProperStrand	135	1	-13.3784
chr3	107271068	107271086	protein_coding	Slc6a17	utr3	ENSMUSG00000027894	ProperStrand	16	chr1	88252836	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-9.3059
chr8	46855240	46855906	protein_coding	Sorbs2	exon	ENSMUSG00000031626	ProperStrand	50	chr10	126675866	126675916	protein_coding	Kif5a	exon	ENSMUSG00000074657	ProperStrand	18	1	-16.1119
chr8	86096190	86096450	protein_coding	Tecr	exon	ENSMUSG00000031708	ProperStrand	100	chr10	23505178	23505268	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-4.6720
chrX	97624723	97624740	protein_coding	Otud6a	exon	ENSMUSG00000051582	ProperStrand	3	chr9	120037898	120037967	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-10.9964
chr2	26493425	26493515	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr12	81439704	81439775	protein_coding	Dcaf5	exon	ENSMUSG00000049106	ProperStrand	23	1	-8.1130
chr7	28961032	28962180	protein_coding	Fbl	exon	ENSMUSG00000046865	ProperStrand	52	chr2	144087322	144087369	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-6.8294
chr13	9833561	9833669	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr10	80641905	80643893	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	5	-1.1241
chr6	51416202	51416337	protein_coding	Hnrnpa2b1	exon	ENSMUSG00000004980	ProperStrand	166	chr1	89673610	89673720	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	7	-12.7834
chr8	44381551	44381595	protein_coding	Zfp42	exon	ENSMUSG00000051176	ProperStrand	127	chr10	39978350	39978440	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-4.0214
chr4	107736569	107743877	protein_coding	Scp2	exon	ENSMUSG00000028603	ProperStrand	23	chr10	23505190	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-4.8598
chr6	29161967	29161985	protein_coding	Impdh1	intron	ENSMUSG00000003500	NonProperStrand	22	chr7	54101237	54102973	protein_coding	Ldha	utr5	ENSMUSG00000063229	ProperStrand	280	1	-12.2583
chr12	112774669	112774703	SINE	B1F1	Alu	chr12B1F1112774616	NonProperStrand	1	chr8	32260335	32260424	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-inf
chr4	118966906	118967006	protein_coding	Ybx1	utr5	ENSMUSG00000028639	ProperStrand	171	chr18	35716832	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-0.7098
chr17	46701894	46701944	protein_coding	Ptk7	utr3	ENSMUSG00000023972	ProperStrand	101	chr10	107800720	107800810	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	1	-7.0337
chr5	35363051	35363850	protein_coding	Rgs12	exon	ENSMUSG00000029101	ProperStrand	13	chr4	131908714	131908794	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.8088
chr10	82418136	82418154	LTR	MT2B2	ERVL	chr10MT2B282418137	NonProperStrand	12	chr4	131865956	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.6729
chr10	62966789	62966805	protein_coding	Ctnna3	exon	ENSMUSG00000060843	NonProperStrand	22	chr2	145076803	145209253	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-9.7470
chr4	21737939	21737962	protein_coding	Usp45	exon	ENSMUSG00000040455	ProperStrand	40	chr8	13876097	13876170	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-7.9542
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	90169069	90169092	protein_coding	Hjurp	intron	ENSMUSG00000044783	ProperStrand	110	1	-3.3307
chr11	101387007	101387039	protein_coding	Brca1	exon	ENSMUSG00000017146	ProperStrand	51	chr11	96683451	96683551	protein_coding	Nfe2l1	utr5	ENSMUSG00000038615	ProperStrand	118	1	-12.2830
chr4	118049034	118049101	protein_coding	Szt2	exon	ENSMUSG00000033253	ProperStrand	23	chrX	103389975	103390075	protein_coding	Pgk1	exon	ENSMUSG00000062070	ProperStrand	484	1	-11.0727
chr7	112782969	112782985	protein_coding	Arfip2	utr3	ENSMUSG00000030881	ProperStrand	191	chr14	68323688	68323734	protein_coding	Cdca2	exon	ENSMUSG00000048922	ProperStrand	50	1	-11.3576
chr1	137316010	137316635	protein_coding	Ipo9	exon	ENSMUSG00000041879	ProperStrand	53	chr10	23505177	23505267	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.4069
chr10	80641699	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	chr17	24856620	24856720	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	2	-2.4185
chr1	137049415	137050814	protein_coding	Arl8a	exon	ENSMUSG00000026426	ProperStrand	12	chr8	98269995	98270075	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-8.7817
chr8	90642723	90643684	protein_coding	Tmem188	utr5	ENSMUSG00000036810	ProperStrand	14	chr11	69483136	69483189	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-5.1730
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr9	64022855	64022900	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-2.0870
chr17	27771040	27771120	protein_coding	Rps10	exon	ENSMUSG00000052146	ProperStrand	94	chr4	86232365	86232455	snoRNA	ENSMUSG00000088958_Scarna8	.	ENSMUSG00000088958	ProperStrand	366	1	-8.7911
chr16	91634196	91634286	protein_coding	Gart	exon	ENSMUSG00000022962	ProperStrand	200	chr5	130295417	130295497	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-2.9920
chr8	56163618	56163638	LINE	Lx	L1	chr8Lx56163470	ProperStrand	7	chr16	23111447	23111492	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-5.0992
chr17	80797927	80797956	protein_coding	Sos1	exon	ENSMUSG00000024241	ProperStrand	10	chr6	5334336	5334352	protein_coding	Asb4	intron	ENSMUSG00000042607	NonProperStrand	6	1	-19.4901
chrX	20252841	20253016	protein_coding	Uba1	exon	ENSMUSG00000001924	ProperStrand	156	chr1	181027187	181027205	protein_coding	Smyd3	intron	ENSMUSG00000055067	ProperStrand	231	1	-8.6964
chr3	82707847	82707863	antisense	4930564K09Rik	.	ENSMUSG00000086273	ProperStrand	48	chr7	20165318	20165338	protein_coding	Zfp296	exon	ENSMUSG00000011267	ProperStrand	8	1	-17.6833
chr4	129321639	129321729	protein_coding	Kpna6	utr3	ENSMUSG00000003731	ProperStrand	39	chr7	116663632	116663712	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.2756
chr16	34549713	34549733	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	chr8	124755189	124755206	protein_coding	Gm20388	intron	ENSMUSG00000092329	ProperStrand	295	1	-8.4977
chr5	122890370	122890450	protein_coding-noncoding	Anapc7	utr5	ENSMUSG00000029466	NonProperStrand	1	chr5	122890087	122890177	protein_coding	Anapc7	exon	ENSMUSG00000029466	NonProperStrand	1	1	-inf
chr2	90235286	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr18	82662186	82662202	protein_coding	Mbp	intron	ENSMUSG00000041607	NonProperStrand	185	5	-11.2663
chr4	43505656	43505683	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr8	37642321	37642417	protein_coding	Dlc1	exon	ENSMUSG00000031523	ProperStrand	89	2	-4.2208
chr7	96107833	96107849	LTR	RLTR23	ERV1	chr7RLTR2396107462	ProperStrand	11	chr9	82723543	82723559	protein_coding	Irak1bp1	utr5	ENSMUSG00000032251	NonProperStrand	16	1	-19.2002
chr5	108336362	108336404	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	chr1	172975151	172975189	tRNA	tRNA699-GlyGCC	.	67	ProperStrand	660	2	-1.7582
chr7	132462345	132462376	protein_coding	4930533L02Rik	utr3	ENSMUSG00000051614	NonProperStrand	1	chr7	150717315	150717414	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-inf
mmu-miR-6240	3	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr1	63225854	63225905	protein_coding	Eef1b2	exon	ENSMUSG00000025967	ProperStrand	106	2	-7.9284
chr1	33828651	33828669	protein_coding	Zfp451	intron	ENSMUSG00000042197	NonProperStrand	393	chr18	75161533	75161596	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-3.5737
chr7	112767613	112767680	protein_coding	Trim3	exon	ENSMUSG00000036989	ProperStrand	11	chr3	144381843	144381860	protein_coding	Sh3glb1	intron	ENSMUSG00000037062	NonProperStrand	7	1	-inf
chr19	18745446	18745489	protein_coding	2410127L17Rik	utr5	ENSMUSG00000024726	ProperStrand	43	chr9	15119639	15119712	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.2218
chr4	122970435	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	chr7	51505224	51505304	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	13	-20.5482
chr7	106630824	106631129	protein_coding	Rps3	exon	ENSMUSG00000030744	ProperStrand	159	chr3	95980311	95980391	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-4.9491
chr4	43505879	43505930	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr5	146051975	146051991	protein_coding	Zfp498	exon	ENSMUSG00000070420	NonProperStrand	6	1	-7.6381
chr11	100819132	100819187	protein_coding	Ptrf	utr3	ENSMUSG00000004044	ProperStrand	14	chr18	42690367	42690466	protein_coding	Tcerg1	exon	ENSMUSG00000024498	ProperStrand	210	1	-13.7678
chr3	90073208	90073290	protein_coding	Dennd4b	exon	ENSMUSG00000042404	ProperStrand	13	chr16	23110890	23110980	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.3283
chr8	109193206	109193264	protein_coding	Cdh1	utr3	ENSMUSG00000000303	ProperStrand	283	chr6	52589227	52589300	snoRNA	ENSMUSG00000064792_SNORA32	.	ENSMUSG00000064792	ProperStrand	151	1	-8.3571
chr4	34295805	34295822	LTR	MMERGLN-int	ERV1	chr4MMERGLN-int34288837	ProperStrand	1	chr16	23110843	23110860	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr13	33241484	33241500	protein_coding	Serpinb9c	utr3	ENSMUSG00000021404	NonProperStrand	1	chr16	23111374	23111464	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-inf
chr14	63752172	63752221	protein_coding	Ctsb	utr5	ENSMUSG00000021939	ProperStrand	48	chr16	88156864	88156880	protein_coding	Grik1	intron	ENSMUSG00000022935	NonProperStrand	20	1	-15.9800
chr8	72588894	72588984	protein_coding	Sugp1	exon	ENSMUSG00000011306	ProperStrand	20	chr9	15119288	15119368	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-7.2896
chr2	61892317	61892334	protein_coding	Slc4a10	intron	ENSMUSG00000026904	ProperStrand	40	chr5	146051961	146052007	protein_coding	Zfp498	exon	ENSMUSG00000070420	ProperStrand	10	1	-17.8218
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr7	120031707	120031810	protein_coding	Tead1	intron	ENSMUSG00000055320	ProperStrand	217	1	-3.4515
chr17	45705058	45705215	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr7	16524110	16524219	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	14	-inf
chr1	120528848	120528938	protein_coding	Tfcp2l1	exon	ENSMUSG00000026380	ProperStrand	158	chr11	69481399	69481479	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	4	-6.4013
chr6	72516005	72516021	protein_coding	Elmod3	utr3	ENSMUSG00000056698	NonProperStrand	1	chr5	108334194	108334240	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-inf
chr10	41644311	41644329	protein_coding	Armc2	exon	ENSMUSG00000071324	ProperStrand	281	chr3	85942714	85942782	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	1	-6.6441
chr13	9833561	9833660	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr17	23947388	23947709	protein_coding	Srrm2	utr5	ENSMUSG00000039218	ProperStrand	521	2	-2.3447
chr7	3656311	3657509	protein_coding	Rps9	exon	ENSMUSG00000006333	ProperStrand	87	chr16	23110454	23110526	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	7	-14.3015
chr2	84881668	84881758	protein_coding	Ssrp1	exon	ENSMUSG00000027067	ProperStrand	118	chr7	148634753	148634833	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-2.7557
chr6	142439080	142439096	protein_coding	Ldhb	exon	ENSMUSG00000030246	NonProperStrand	63	chr2	11517048	11518272	protein_coding	Rbm17	exon	ENSMUSG00000037197	ProperStrand	50	1	-13.5811
chr4	82873057	82873120	protein_coding	Ttc39b	exon	ENSMUSG00000038172	ProperStrand	78	chr19	8799830	8799897	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	4	-14.1241
chr9	69846974	69847008	protein_coding	Bnip2	exon	ENSMUSG00000011958	ProperStrand	2	chr2	153050783	153050799	protein_coding	Tspyl3	exon	ENSMUSG00000074671	ProperStrand	228	1	-18.3799
chr11	62419064	62419082	protein_coding	BC046404	utr3	ENSMUSG00000046417	NonProperStrand	5	chr17	35087894	35087954	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	2	-16.5710
chr8	77563127	77563179	protein_coding	Tom1	intron	ENSMUSG00000042870	ProperStrand	30	chr11	96123855	96123877	protein_coding	Gm53	utr3	ENSMUSG00000078706	NonProperStrand	16	1	-17.4052
chr14	21275781	21281836	protein_coding	Anxa7	exon	ENSMUSG00000021814	ProperStrand	20	chr10	23505152	23505253	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-13.7931
chr11	120645349	120645365	protein_coding	Rfng	exon	ENSMUSG00000025158	NonProperStrand	13	chr15	88977274	88977290	protein_coding	Mapk11	intron	ENSMUSG00000053137	NonProperStrand	29	1	-18.0645
chr2	29270363	29270453	protein_coding	Med27	intron	ENSMUSG00000026799	ProperStrand	7	chr19	59064715	59064732	protein_coding	4930506M07Rik	exon	ENSMUSG00000041362	ProperStrand	36	1	-18.3494
chr11	107417605	107417623	protein_coding	Helz	intron	ENSMUSG00000020721	ProperStrand	60	chr5	108336362	108336409	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-8.0667
chr13	40823795	40823812	protein_coding	Tfap2a	exon	ENSMUSG00000021359	ProperStrand	49	chr19	8963027	8963087	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.6199
chr15	99548653	99548669	protein_coding	Gpd1	exon	ENSMUSG00000023019	ProperStrand	40	chr11	77996560	77996611	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-6.8961
chr13	15254568	15254648	LINE	L1Md_F2	L1	chr13L1Md_F215254552	ProperStrand	1	chr13	15254446	15254536	LINE	L1_Rod	L1	chr13L1_Rod15253991	ProperStrand	1	1	-inf
chr13	49299089	49299152	protein_coding	1110007C09Rik	exon	ENSMUSG00000037960	ProperStrand	5	chr9	58547119	58547136	protein_coding	2410076I21Rik	intron	ENSMUSG00000074269	ProperStrand	91	1	-17.4757
chr1	155316048	155316064	protein_coding	Dhx9	exon	ENSMUSG00000042699	ProperStrand	98	chr16	23110456	23110491	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.6684
chr19	39028828	39028890	protein_coding	Hells	intron	ENSMUSG00000025001	ProperStrand	23	chr11	77996594	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-8.0090
chr16	91658596	91658624	protein_coding	Son	exon	ENSMUSG00000022961	ProperStrand	59	chr4	116230385	116230401	protein_coding	Gpbp1l1	utr5	ENSMUSG00000034042	NonProperStrand	106	1	-12.2043
chr4	153386119	153386209	protein_coding	Lrrc47	exon	ENSMUSG00000029028	ProperStrand	30	chrX	34622940	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-4.4685
mmu-miR-5099	0	16	miRNA	mmu-miR-5099	.	mmu-miR-5099	ProperStrand	5	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr18	32405206	32405222	protein_coding	Ercc3	exon	ENSMUSG00000024382	ProperStrand	280	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-6.3074
chr6	125113054	125113203	protein_coding	Gapdh	exon	ENSMUSG00000057666	ProperStrand	356	chr18	33954899	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-0.7446
chr5	25355729	25355820	protein_coding	Actr3b	utr3	ENSMUSG00000056367	ProperStrand	32	chr11	116938557	116938640	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	19	-20.3060
chr6	146708677	146708693	protein_coding	Stk38l	exon	ENSMUSG00000001630	ProperStrand	60	chr7	4691730	4691749	protein_coding	Suv420h2	utr5	ENSMUSG00000059851	NonProperStrand	70	1	-13.0057
chr2	26493398	26493488	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr2	130101241	130101312	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	7	-0.9546
chr2	126478143	126479303	protein_coding	Gabpb1	exon	ENSMUSG00000027361	ProperStrand	54	chr18	35714194	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	3	-9.0090
chr8	91102970	91102989	protein_coding	Nkd1	intron	ENSMUSG00000031661	NonProperStrand	6	chr3	108357359	108357459	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	NonProperStrand	17	1	-19.9795
mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr7	52714586	52715084	protein_coding	Ftl1	utr5	ENSMUSG00000050708	ProperStrand	807	3	-3.8826
chr2	93542704	93542770	protein_coding	Ext2	intron	ENSMUSG00000027198	ProperStrand	49	chr6	4466432	4466902	protein_coding	Col1a2	exon	ENSMUSG00000029661	ProperStrand	3	1	-inf
chr7	50976935	50976953	lincRNA	2310002F09Rik	intron	ENSMUSG00000085370	ProperStrand	9	chr16	23110841	23110889	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.9939
chr3	30713162	30713252	protein_coding	Sec62	exon	ENSMUSG00000027706	NonProperStrand	2	chr18	33954856	33954936	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	NonProperStrand	24	2	-inf
chr8	98270045	98270096	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	NonProperStrand	11	chr18	35716763	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	NonProperStrand	45	2	-21.5749
chr7	117166721	117166811	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	chr2	91436269	91436321	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	2	-0.8054
chr7	135125439	135125493	protein_coding	Fus	utr3	ENSMUSG00000030795	ProperStrand	162	chr15	34370545	34370577	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	4	-7.1320
chr13	41107704	41107735	protein_coding	Pak1ip1	exon	ENSMUSG00000038683	ProperStrand	49	chr2	130103751	130103811	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	2	-14.0949
chr17	4082102	4082237	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr17	24857731	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	6	-3.6565
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr1	172975151	172975189	tRNA	tRNA699-GlyGCC	.	1146178	ProperStrand	660	1	-2.6764
chr19	15979735	15979835	protein_coding	Psat1	utr3	ENSMUSG00000024640	ProperStrand	33	chr11	97642952	97643014	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.5405
chr2	32134654	32134744	protein_coding	Swi5	intron	ENSMUSG00000044627	ProperStrand	16	chr7	117189957	117190037	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-5.8807
chr10	20072716	20080860	protein_coding	Fam54a	exon	ENSMUSG00000019992	ProperStrand	232	chr19	8963049	8963166	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-1.0491
chr1	12658071	12658131	lincRNA	Gm17644	exon	ENSMUSG00000066918	NonProperStrand	37	chr4	131865886	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-6.7887
chr9	103950068	103950086	protein_coding	Uba5	intron	ENSMUSG00000032557	ProperStrand	111	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-9.1946
chr17	6232006	6232022	protein_coding	Tulp4	exon	ENSMUSG00000034377	NonProperStrand	265	chr17	71202521	71202576	protein_coding	Tgif1	intron	ENSMUSG00000047407	ProperStrand	64	2	-16.0477
chr11	120647116	120647224	protein_coding-noncoding	Gps1	utr5	ENSMUSG00000025156	ProperStrand	1	chr4	131865885	131865918	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr6	146121879	146121897	protein_coding	Itpr2	exon	ENSMUSG00000030287	ProperStrand	20	chr11	69481343	69481433	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.2928
chr16	20297753	20298241	protein_coding	Parl	exon	ENSMUSG00000033918	ProperStrand	19	chr18	37803000	37803016	protein_coding	Taf7	exon	ENSMUSG00000051316	NonProperStrand	5	5	-inf
chr1	46865254	46865354	protein_coding	Slc39a10	utr3	ENSMUSG00000025986	ProperStrand	95	chr6	115758051	115758117	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	9	-19.6891
chr12	70260494	70260584	misc_RNA	AC099934.1	.	ENSMUSG00000092665	ProperStrand	45	chr10	110918554	110918634	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-3.9843
chr4	149005907	149022928	protein_coding	Clstn1	utr3	ENSMUSG00000039953	ProperStrand	173	chr4	131908236	131908350	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	8	-6.3374
chr16	62794633	62794649	protein_coding	Arl13b	utr3	ENSMUSG00000022911	ProperStrand	4	chr1	162965986	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-9.1328
chr17	34333662	34333678	protein_coding	Tap1	exon	ENSMUSG00000037321	ProperStrand	6	chr11	69481335	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-7.7824
chr7	5047891	5047981	protein_coding	Epn1	intron	ENSMUSG00000035203	ProperStrand	15	chr5	130300423	130300553	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-8.4841
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	55269532	55269551	protein_coding	Fam188b	utr3	ENSMUSG00000038022	ProperStrand	7	1	-8.8025
chr18	80637717	80637759	protein_coding	Ctdp1	intron	ENSMUSG00000033323	ProperStrand	69	chr15	82980085	82980168	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	2	-11.0560
chr11	69222278	69227047	protein_coding	Kdm6b	utr5	ENSMUSG00000018476	ProperStrand	76	chr3	123210913	123210985	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.6934
chr16	17651648	17651686	protein_coding	Med15	utr3	ENSMUSG00000012114	ProperStrand	24	chr7	118219704	118219740	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-5.9542
chr3	108228259	108228275	protein_coding	Sars	utr3	ENSMUSG00000068739	NonProperStrand	200	chr6	71832579	71832687	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-3.3271
chr7	133939317	133939500	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	chr12	112779247	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	5	-4.9949
chr9	99483993	99484009	protein_coding	Dbr1	exon	ENSMUSG00000032469	ProperStrand	162	chr11	62416575	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-3.2936
chr11	6519811	6519943	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	chr8	129468851	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	10	-9.9878
chr17	35087896	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	chr11	106874189	106874254	tRNA	tRNA945-ArgCCG	.	228036	ProperStrand	133	10	-inf
chr8	35782897	35782914	LINE	Lx8	L1	chr8Lx835782461	ProperStrand	25	chr14	31827478	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-8.7022
chr15	26472289	26472305	SINE	MIR	MIR	chr15MIR26472217	ProperStrand	5	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-12.8963
chr10	75885902	75889651	protein_coding	Pcnt	exon	ENSMUSG00000001151	ProperStrand	127	chr9	120038491	120038571	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.7786
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr6	37998891	37998976	protein_coding	Atp6v0a4	utr3	ENSMUSG00000038600	ProperStrand	14	2	-14.1173
chr4	43505657	43505737	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr4	63211296	63211314	protein_coding	Atp6v1g1	utr3	ENSMUSG00000039105	NonProperStrand	24	2	-7.9735
chr11	4632548	4632638	protein_coding	Zmat5	intron	ENSMUSG00000009076	ProperStrand	9	chr10	23505200	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	6	-21.0545
chr7	107520270	107520350	protein_coding	Ppme1	utr5	ENSMUSG00000030718	ProperStrand	38	chr9	67810942	67811901	protein_coding	Vps13c	exon	ENSMUSG00000035284	ProperStrand	69	1	-13.9562
chr1	136510500	136527949	protein_coding	Kdm5b	utr5	ENSMUSG00000042207	ProperStrand	223	chr11	97642952	97643080	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-1.3176
chr11	116535465	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr2	158185576	158185655	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	5	-3.4483
chr4	147992530	147992630	protein_coding	Tardbp	exon	ENSMUSG00000041459	ProperStrand	120	chr9	120038613	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-3.4003
chr2	70521084	70522114	protein_coding	Gorasp2	exon	ENSMUSG00000014959	ProperStrand	21	chr16	23111416	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-5.1714
chr8	117320447	117320464	protein_coding	Wwox	intron	ENSMUSG00000004637	NonProperStrand	16	chr9	15119631	15119701	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-8.4872
chr4	62353635	62353651	protein_coding	Rgs3	intron	ENSMUSG00000059810	ProperStrand	40	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.4299
chr15	84101672	84101734	protein_coding	Parvb	exon	ENSMUSG00000022438	ProperStrand	127	chr11	116938557	116938647	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-4.7000
chr13	23312577	23312595	LINE	L1MB2	L1	chr13L1MB223312569	NonProperStrand	4	chr6	3415338	3415355	protein_coding	Hepacam2	intron	ENSMUSG00000044156	NonProperStrand	1	1	-inf
chr18	73693168	73693189	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr8	53422363	53422428	snRNA	ENSMUSG00000064682_U2	.	ENSMUSG00000064682	ProperStrand	55	1	-5.6945
chr1	90168361	90168451	protein_coding	Hjurp	intron	ENSMUSG00000044783	ProperStrand	110	chr7	29136547	29136627	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.4137
chr9	15800370	15800387	protein_coding	Fat3	exon	ENSMUSG00000074505	ProperStrand	14	chr16	23110960	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.2008
chr4	136101981	136101997	protein_coding	Luzp1	utr3	ENSMUSG00000001089	NonProperStrand	47	chr11	68886975	68887039	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-4.6098
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr4	133403989	133404005	protein_coding	Rps6ka1	exon	ENSMUSG00000003644	ProperStrand	68	1	-7.5454
chr10	74731827	74731906	protein_coding	Specc1l	intron	ENSMUSG00000033444	ProperStrand	36	chr12	112779229	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-5.7728
chr18	43013056	43013075	protein_coding	Ppp2r2b	intron	ENSMUSG00000024500	ProperStrand	25	chr7	116663640	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	7	-20.3969
chr16	57391760	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr2	26447990	26448087	protein_coding	Egfl7	utr3	ENSMUSG00000026921	ProperStrand	44	1	-8.4144
chr3	96218358	96218547	misc_RNA	Telomerase-vert	.	ENSMUSG00000064796	ProperStrand	443	chr5	74489202	74489327	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	2	-3.5613
chr6	67221210	67221264	protein_coding	Serbp1	exon	ENSMUSG00000036371	ProperStrand	261	chr17	24857815	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-0.8856
chr11	62416575	62416599	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr10	30530955	30531027	tRNA	tRNA81-GluCTC	.	204948	ProperStrand	154	2	-11.3938
chr7	52381534	52382424	protein_coding	Rpl13a	exon	ENSMUSG00000074129	ProperStrand	269	chr11	69481335	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	6	-7.3164
chr17	49634997	49635019	protein_coding	Daam2	intron	ENSMUSG00000040260	ProperStrand	4	chr6	125047120	125047164	protein_coding	Chd4	utr5	ENSMUSG00000063870	ProperStrand	303	1	-15.7379
chr1	152301580	152301597	protein_coding	Prg4	exon	ENSMUSG00000006014	ProperStrand	4	chr8	73419713	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-8.6136
chr8	35224406	35228227	protein_coding	Tmem66	exon	ENSMUSG00000031532	ProperStrand	8	chr9	59820021	59820039	protein_coding	Thsd4	utr3	ENSMUSG00000032289	ProperStrand	20	1	-18.8046
chr2	90235286	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	134743859	134743909	protein_coding	Rnf40	exon	ENSMUSG00000030816	ProperStrand	12	2	-12.3824
chr7	148633887	148633915	protein_coding	Rplp2	exon	ENSMUSG00000025508	ProperStrand	106	chr19	8963087	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.3898
chr18	35931547	35931585	protein_coding	Ube2d2	utr5	ENSMUSG00000091896	ProperStrand	20	chr4	131908810	131908891	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-5.2412
chr15	102146562	102146994	protein_coding	Espl1	exon	ENSMUSG00000058290	ProperStrand	172	chr12	88778672	88778752	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-4.4499
chrX	72214248	72214264	protein_coding-noncoding	Gab3	utr3	ENSMUSG00000032750	ProperStrand	420	chr9	64024930	64024956	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	1	-5.2945
chr4	134733397	134733415	protein_coding	Runx3	utr3	ENSMUSG00000070691	ProperStrand	17	chr18	35714144	35714240	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-5.8775
chr15	76432214	76432356	protein_coding	Cpsf1	exon	ENSMUSG00000034022	ProperStrand	127	chr11	97642959	97643049	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.3004
chr6	84099891	84099941	protein_coding	Dysf	exon	ENSMUSG00000033788	ProperStrand	26	chr16	23111777	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-5.7618
chr8	70196882	70196962	LINE	Lx7	L1	chr8Lx770196675	NonProperStrand	1	chr8	69975453	69975543	SINE	B3	B2	chr8B369975332	ProperStrand	1	1	-inf
chr8	124083981	124084315	protein_coding	Fbxo31	exon	ENSMUSG00000031811	ProperStrand	9	chr18	35716811	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-9.5374
chr5	100821564	100821624	protein_coding	Sec31a	exon	ENSMUSG00000035325	ProperStrand	61	chr11	62590610	62590630	snoRNA	ENSMUSG00000064692_SNORA67	.	ENSMUSG00000064692	ProperStrand	185	1	-11.0210
chr11	77995191	77995254	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	chr6	125136376	125136421	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	2	-1.0650
chr1	152446709	152446726	protein_coding	Hmcn1	exon	ENSMUSG00000066842	ProperStrand	5	chr14	76372336	76372426	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	3	-inf
chr5	144268293	144268980	protein_coding	Rac1	exon	ENSMUSG00000001847	ProperStrand	32	chr16	23111725	23111825	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.9714
chr2	40072892	40072909	LINE	Lx2A1	L1	chr2Lx2A140072580	NonProperStrand	1	chr4	131908381	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-inf
chr8	113366274	113366298	protein_coding	Sf3b3	intron	ENSMUSG00000033732	ProperStrand	181	chr8	113366336	113366354	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	1	-6.9793
chr16	36886302	36887328	antisense	4930565N06Rik	.	ENSMUSG00000084834	ProperStrand	27	chr2	179322377	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	1	-12.8272
chr14	64111661	64112656	protein_coding	Tdh	exon	ENSMUSG00000021953	ProperStrand	67	chr2	63936037	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-7.6407
chr19	25484358	25484374	protein_coding	Kank1	exon	ENSMUSG00000032702	ProperStrand	218	chr1	20552541	20552557	protein_coding	Pkhd1	exon	ENSMUSG00000043760	NonProperStrand	49	1	-11.1343
chr14	52703807	52703849	protein_coding	Hnrnpc	exon	ENSMUSG00000060373	ProperStrand	75	chr16	23111377	23111467	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-1.9291
chrX	93136011	93136027	protein_coding	Las1l	exon	ENSMUSG00000057421	ProperStrand	248	chr16	23110453	23110514	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	4	-2.9446
chr4	155124263	155124353	protein_coding	Atad3a	exon	ENSMUSG00000029036	ProperStrand	28	chr8	98269975	98270055	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-7.0528
chr3	97817679	97851651	protein_coding	Notch2	exon	ENSMUSG00000027878	ProperStrand	86	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	1	-6.3148
chrX	71516340	71518458	protein_coding	Rpl10	exon	ENSMUSG00000008682	ProperStrand	71	chr16	23110898	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	8	-6.0031
chr2	127183258	127183275	protein_coding	Astl	utr3	ENSMUSG00000050468	NonProperStrand	10	chr4	131908395	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-7.7635
chr15	98604924	98606960	protein_coding	Wnt10b	exon	ENSMUSG00000022996	NonProperStrand	189	chr1	162965531	162965559	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.3848
chr4	138125348	138125364	protein_coding	Vwa5b1	exon	ENSMUSG00000028753	NonProperStrand	16	chr8	26827320	26827337	protein_coding	Whsc1l1	utr3	ENSMUSG00000054823	NonProperStrand	17	1	-19.0364
chr7	128180668	128180703	protein_coding	Mettl9	intron	ENSMUSG00000030876	ProperStrand	20	chr11	97698327	97698375	protein_coding	Lasp1	utr3	ENSMUSG00000038366	ProperStrand	65	1	-15.3910
chrX	98613387	98613477	protein_coding	Zmym3	intron	ENSMUSG00000031310	ProperStrand	17	chr10	110918561	110918641	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-9.6520
chr8	72705188	72705347	protein_coding	Tmem161a	exon	ENSMUSG00000002342	ProperStrand	42	chr19	8963074	8963164	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	5	-13.0386
chr1	71081573	71081620	protein_coding	Bard1	intron	ENSMUSG00000026196	ProperStrand	44	chr7	82644562	82644628	protein_coding	Akap13	intron	ENSMUSG00000066406	ProperStrand	80	2	-20.2750
chr2	157119950	157120991	protein_coding	Rpn2	exon	ENSMUSG00000027642	ProperStrand	363	chr11	106362640	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-3.9087
chr3	97561499	97561519	protein_coding	Pde4dip	exon	ENSMUSG00000038170	NonProperStrand	15	chr15	75828058	75828074	protein_coding	Mapk15	exon	ENSMUSG00000063704	NonProperStrand	14	1	-19.9522
chr18	26188514	26188594	LINE	Lx	L1	chr18Lx26186564	NonProperStrand	1	chr13	71412172	71412262	LTR	RLTR24	ERV1	chr13RLTR2471411860	NonProperStrand	1	1	-inf
chr11	95435756	95439304	protein_coding	Ngfr	exon	ENSMUSG00000000120	ProperStrand	31	chr4	137120327	137120371	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	1	-9.4331
chr12	13445536	13445626	protein_coding	Nbas	intron	ENSMUSG00000020576	NonProperStrand	23	chr12	13410676	13410756	protein_coding	Nbas	intron	ENSMUSG00000020576	ProperStrand	35	1	-16.3151
chrX	11635848	11635865	protein_coding	Bcor	exon	ENSMUSG00000040363	NonProperStrand	293	chr7	117189863	117189941	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-3.1906
chr3	127255878	127255937	protein_coding	Larp7	intron	ENSMUSG00000027968	ProperStrand	3	chr4	129662259	129662276	protein_coding	Bai2	utr5	ENSMUSG00000028782	ProperStrand	119	1	-18.6125
chr1	59539683	59539700	protein_coding	Fzd7	utr5	ENSMUSG00000041075	ProperStrand	373	chr5	145596975	145598034	protein_coding	Trrap	exon	ENSMUSG00000045482	ProperStrand	399	1	-5.8924
chr3	101398984	101408337	protein_coding	Atp1a1	exon	ENSMUSG00000033161	ProperStrand	316	chr5	130300473	130300516	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-0.7907
chr4	116274391	116274779	protein_coding	Nasp	exon	ENSMUSG00000028693	ProperStrand	64	chr7	116663636	116663716	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.4017
chr1	88202854	88202919	protein_coding	B3gnt7	utr3	ENSMUSG00000079445	ProperStrand	13	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.1201
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr11	14047507	14047524	lincRNA	4930554G24Rik	exon	ENSMUSG00000085452	ProperStrand	23	1	-10.6535
chr1	182509320	182509410	protein_coding	Parp1	exon	ENSMUSG00000026496	ProperStrand	227	chr10	39978291	39978371	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-2.9605
chr3	108147811	108148679	protein_coding	Sort1	exon	ENSMUSG00000068747	ProperStrand	32	chr16	23110982	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.9664
chr1	181067485	181067503	protein_coding	Smyd3	intron	ENSMUSG00000055067	NonProperStrand	190	chr4	131865855	131865988	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-1.5543
chr5	124183627	124186584	protein_coding	Rsrc2	exon	ENSMUSG00000029422	ProperStrand	17	chr10	90581034	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	7	-inf
chr19	10260265	10260355	protein_coding	Fads1	exon	ENSMUSG00000010663	ProperStrand	21	chr11	117617276	117617301	protein_coding	Tnrc6c	exon	ENSMUSG00000025571	ProperStrand	51	1	-15.7793
chr6	35197377	35197459	protein_coding	Nup205	utr3	ENSMUSG00000038759	ProperStrand	56	chr4	131908356	131908421	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.5191
chr7	109334393	109334493	protein_coding	Nup98	utr5	ENSMUSG00000063550	ProperStrand	100	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-4.5057
chr3	89138221	89138237	protein_coding	Efna4	exon	ENSMUSG00000028040	NonProperStrand	7	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.7768
chr4	64963757	64963774	protein_coding	Pappa	intron	ENSMUSG00000028370	NonProperStrand	32	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-9.8591
chr4	46554810	46554826	protein_coding	Coro2a	exon	ENSMUSG00000028337	NonProperStrand	24	chr11	74718931	74719010	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	1	-10.8775
chr4	131866202	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	chr8	113366323	113366353	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	2	-1.1749
chr5	76754297	76754345	protein_coding	Pdcl2	intron	ENSMUSG00000029235	ProperStrand	6	chr7	148634776	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-8.6331
chr11	117584425	117584514	protein_coding	Tnrc6c	exon	ENSMUSG00000025571	ProperStrand	51	chr9	72810282	72810300	protein_coding	Dyx1c1	intron	ENSMUSG00000092192	ProperStrand	34	2	-21.7972
chr2	32818887	32818942	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	chr11	83107810	83107903	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	1	-1.4909
chr1	59539683	59539700	protein_coding	Fzd7	utr5	ENSMUSG00000041075	ProperStrand	373	chr11	97301671	97301764	protein_coding	Arhgap23	intron	ENSMUSG00000049807	ProperStrand	80	1	-9.0760
chr2	4644150	4699378	protein_coding	Bend7	intron	ENSMUSG00000048186	ProperStrand	15	chr16	23110899	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	11	-19.6396
chr11	12350634	12350667	protein_coding	Cobl	intron	ENSMUSG00000020173	ProperStrand	133	chr5	111121066	111121180	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	5	-19.0318
chr16	31949011	31949101	protein_coding	Ncbp2	intron	ENSMUSG00000022774	NonProperStrand	28	chr4	137906438	137906518	protein_coding	Cda	intron	ENSMUSG00000028755	NonProperStrand	1	1	-inf
chr4	147318154	147318182	protein_coding	2510039O18Rik	intron	ENSMUSG00000044496	ProperStrand	28	chr5	130300460	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-6.5864
chr8	112387973	112387989	antisense	Gm17344	.	ENSMUSG00000078143	NonProperStrand	100	chr17	27559700	27559717	protein_coding	Grm4	utr3	ENSMUSG00000063239	ProperStrand	147	1	-10.4886
chr11	95371545	95371561	protein_coding	Nxph3	utr3	ENSMUSG00000046719	NonProperStrand	1	chr15	102129255	102129271	protein_coding	Espl1	exon	ENSMUSG00000058290	NonProperStrand	4	1	-inf
chr9	21393549	21393591	protein_coding	Carm1	utr3	ENSMUSG00000032185	ProperStrand	82	chr4	116826700	116826763	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	5	-19.7611
chr15	92908024	92908076	Low_complexity	CT-rich	Low_complexity	chr15CT-rich92907999	ProperStrand	2	chr19	42223475	42223493	protein_coding	Marveld1	utr3	ENSMUSG00000044345	ProperStrand	3	2	-inf
chr9	108458830	108458886	protein_coding	Qrich1	exon	ENSMUSG00000006673	ProperStrand	30	chr18	73693166	73693184	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-6.8967
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr3	145601279	145601864	protein_coding	2410004B18Rik	exon	ENSMUSG00000036873	ProperStrand	10	1	-10.5714
chr17	13941082	13944317	protein_coding	Mllt4	exon	ENSMUSG00000068036	ProperStrand	156	chr7	29136540	29136620	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-0.9495
chr2	129004104	129004121	antisense	AI847159	.	ENSMUSG00000084826	NonProperStrand	63	chr7	129305091	129305163	protein_coding	Plk1	exon	ENSMUSG00000030867	ProperStrand	146	1	-11.4306
chr6	29704749	29704787	protein_coding	Smo	exon	ENSMUSG00000001761	ProperStrand	10	chr10	23505152	23505211	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.3364
chr1	95523606	95523638	protein_coding	Stk25	exon	ENSMUSG00000026277	ProperStrand	6	chr18	35716766	35716824	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-6.6008
chr5	100855902	100855973	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr14	31827517	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	4	-4.6191
chr5	100855902	100855972	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr11	106993236	106993336	protein_coding	Bptf	utr5	ENSMUSG00000040481	ProperStrand	70	1	-6.3329
chr11	98299096	98299196	protein_coding	1810046J19Rik	utr3	ENSMUSG00000002580	ProperStrand	1	chr19	8799851	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-inf
chr16	21903994	21905191	protein_coding	Map3k13	exon	ENSMUSG00000033618	NonProperStrand	16	chr16	23111372	23111430	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.4608
chr7	104056739	104056755	antisense	Gm15415	.	ENSMUSG00000087304	ProperStrand	8	chr6	86388429	86388445	protein_coding	C87436	utr5	ENSMUSG00000046679	ProperStrand	18	1	-18.6388
chr2	31924012	31924028	protein_coding	Fam78a	utr3	ENSMUSG00000050592	NonProperStrand	340	chrX	49966867	49966892	protein_coding	Gpc3	exon	ENSMUSG00000055653	ProperStrand	43	1	-10.5090
chr10	121904750	121904830	LINE	Lx2	L1	chr10Lx2121904451	ProperStrand	1	chr2	54410497	54410587	protein_coding	Galnt13	intron	ENSMUSG00000060988	ProperStrand	45	1	-inf
chr17	84052910	84052990	SINE	B1_Mur1	Alu	chr17B1_Mur184052921	ProperStrand	1	chr17	84053075	84053165	SINE	B1_Mur2	Alu	chr17B1_Mur284053013	ProperStrand	1	1	-inf
chr5	137741545	137743379	protein_coding	Srrt	exon	ENSMUSG00000037364	ProperStrand	31	chr10	25976379	25976395	protein_coding	Samd3	intron	ENSMUSG00000051354	NonProperStrand	11	4	-19.1827
chr12	81275488	81275577	protein_coding	Actn1	exon	ENSMUSG00000015143	ProperStrand	128	chr9	15118255	15118321	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-2.1429
chr1	141413026	141413042	protein_coding	F13b	exon	ENSMUSG00000026368	ProperStrand	2	chr7	150717364	150717425	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-12.9258
chr11	115104844	115104861	protein_coding	Tmem104	exon	ENSMUSG00000045980	NonProperStrand	21	chr16	23110843	23110889	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.5481
chr7	150253250	150253350	protein_coding	Cd81	utr3	ENSMUSG00000037706	ProperStrand	88	chr9	120038564	120038589	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.3725
chr14	52694758	52694942	protein_coding	Hnrnpc	exon	ENSMUSG00000060373	ProperStrand	75	chr7	117189978	117190058	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.9308
chr7	134341340	134341357	protein_coding	Tbc1d10b	utr3	ENSMUSG00000042492	ProperStrand	187	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-3.9893
chr3	16083589	16083606	protein_coding	Ythdf3	intron	ENSMUSG00000047213	NonProperStrand	18	chr11	6428099	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.4934
chr8	36532162	36532178	protein_coding	Eri1	utr3	ENSMUSG00000031527	ProperStrand	6	chr4	117567257	117567433	protein_coding	Ipo13	exon	ENSMUSG00000033365	ProperStrand	48	1	-18.0543
chr9	106082839	106082940	protein_coding	Wdr82	intron	ENSMUSG00000020257	ProperStrand	34	chr1	162967512	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.5455
chr1	78736637	78736653	LINE	Lx8	L1	chr1Lx878736589	ProperStrand	10	chr9	75236635	75236652	protein_coding	Mapk6	exon	ENSMUSG00000042688	ProperStrand	25	1	-18.4982
chr2	90235296	90235327	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr3	85944541	85944562	snoRNA	ENSMUSG00000064390_Rnu73b	.	ENSMUSG00000064390	ProperStrand	164	3	-6.8340
chr19	10347070	10347093	protein_coding	Dagla	intron	ENSMUSG00000035735	ProperStrand	23	chr2	26768050	26768118	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	2	-16.2372
chr1	58003870	58003889	protein_coding	Spats2l	utr3	ENSMUSG00000038305	NonProperStrand	9	chr16	23110902	23111002	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.9939
chr8	77742558	77742574	protein_coding	Rasd2	exon	ENSMUSG00000034472	NonProperStrand	237	chr9	64023255	64023290	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	1	-5.7264
chr9	119351939	119351957	lincRNA	Gm16707	intron	ENSMUSG00000086780	NonProperStrand	17	chr6	115757992	115758092	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-7.9927
chr1	172993122	172993139	protein_coding	Fcgr3	intron	ENSMUSG00000059498	ProperStrand	44	chr19	8798740	8798759	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-5.4038
chr3	101399020	101408370	protein_coding	Atp1a1	utr5	ENSMUSG00000033161	ProperStrand	316	chr7	117189957	117189992	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-0.7711
chr2	90235313	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	131111716	131111733	protein_coding	Caln1	intron	ENSMUSG00000060371	NonProperStrand	15	1	-7.2074
chr11	82692475	82692491	protein_coding	Rad51l3	exon	ENSMUSG00000018841	ProperStrand	112	chr3	159158478	159158511	protein_coding	Depdc1a	utr5	ENSMUSG00000028175	ProperStrand	2	1	-inf
chr2	71279287	71279317	protein_coding	Hat1	exon	ENSMUSG00000027018	ProperStrand	53	chr18	33954879	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	3	-9.2133
chr8	76188500	76188590	LINE	L1Md_F	L1	chr8L1Md_F76188337	ProperStrand	1	chr8	76188272	76188362	LINE	Lx	L1	chr8Lx76186856	ProperStrand	1	1	-inf
chrX	105190993	105191010	LTR	RLTR9E	ERVK	chrXRLTR9E105190921	NonProperStrand	20	chr4	151887777	151887845	protein_coding	Nphp4	intron	ENSMUSG00000039577	ProperStrand	33	1	-16.6813
chr9	83491070	83491121	protein_coding	Sh3bgrl2	utr3	ENSMUSG00000032261	ProperStrand	21	chr10	6063958	6063976	protein_coding	Akap12	intron	ENSMUSG00000038587	ProperStrand	1008	1	-9.7939
chr8	127212779	127212879	protein_coding	Ttc13	exon	ENSMUSG00000037300	ProperStrand	20	chr17	35089181	35089221	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-7.6750
chrX	46850717	46850918	protein_coding	Arhgap36	exon	ENSMUSG00000036198	ProperStrand	1	chr7	4960751	4964323	protein_coding	Fiz1	exon	ENSMUSG00000061374	NonProperStrand	1	1	-inf
chr17	75690723	75690739	protein_coding	Ltbp1	exon	ENSMUSG00000001870	ProperStrand	136	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-6.9634
chr18	52725028	52725118	DNA	URR1A	MER1_type	chr18URR1A52724912	ProperStrand	1	chr2	130637651	130637731	protein_coding	4930402H24Rik	intron	ENSMUSG00000027309	ProperStrand	16	1	-inf
chr10	82456766	82456784	protein_coding	Chst11	intron	ENSMUSG00000034612	ProperStrand	170	chr5	130295497	130295548	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-3.2832
chr9	20724286	20724368	protein_coding	Dnmt1	exon	ENSMUSG00000004099	NonProperStrand	12	chr12	112544671	112544736	protein_coding	Cdc42bpb	exon	ENSMUSG00000021279	NonProperStrand	3	2	-inf
chr3	97817679	97851652	protein_coding	Notch2	exon	ENSMUSG00000027878	ProperStrand	86	chrX	101491182	101491198	protein_coding	Abcb7	exon	ENSMUSG00000031333	ProperStrand	22	1	-14.6291
chr11	51456896	51456985	protein_coding	N4bp3	utr3	ENSMUSG00000001053	ProperStrand	45	chr3	95980284	95980321	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-7.4307
chr13	99609909	99609942	protein_coding	Tnpo1	utr3	ENSMUSG00000009470	ProperStrand	56	chr3	97523553	97523569	protein_coding	Pde4dip	utr3	ENSMUSG00000038170	ProperStrand	25	1	-15.2160
chr17	75790277	75790293	protein_coding	Ltbp1	utr3	ENSMUSG00000001870	NonProperStrand	66	chr2	32563527	32563545	protein_coding	Cdk9	exon	ENSMUSG00000009555	NonProperStrand	49	1	-13.5337
chr3	35742094	35742139	protein_coding	Atp11b	intron	ENSMUSG00000037400	ProperStrand	39	chr7	134341340	134341357	protein_coding	Tbc1d10b	utr3	ENSMUSG00000042492	ProperStrand	187	1	-11.9022
chr4	125841962	125842055	protein_coding	Thrap3	utr3	ENSMUSG00000043962	ProperStrand	84	chr1	162965977	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-2.9920
chr9	54730187	54730260	protein_coding	Ireb2	exon	ENSMUSG00000032293	ProperStrand	45	chr17	13112491	13112581	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-5.1358
chr7	20310054	20310070	protein_coding	Pvrl2	exon	ENSMUSG00000062300	ProperStrand	110	chr18	73693111	73693139	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-4.3551
chr17	35142281	35142422	protein_coding	Vars	exon	ENSMUSG00000007029	ProperStrand	121	chr2	26494771	26494842	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.9138
chr7	138518617	138518707	protein_coding	Fgfr2	intron	ENSMUSG00000030849	ProperStrand	100	chr7	54441631	54441721	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-8.7059
chr2	158451027	158451043	protein_coding	Actr5	exon	ENSMUSG00000037761	NonProperStrand	94	chr10	23505152	23505270	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-3.6067
chr8	27109826	27109916	protein_coding	Fnta	utr3	ENSMUSG00000015994	ProperStrand	2	chr7	150717317	150717397	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-12.9258
chr14	21843417	21848401	protein_coding	Vcl	utr5	ENSMUSG00000021823	ProperStrand	48	chr3	123210854	123210876	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.4382
chr4	131908408	131908466	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr5	96500178	96500195	protein_coding	Cnot6l	utr3	ENSMUSG00000034724	NonProperStrand	15	1	-10.0651
chr9	21548752	21548768	protein_coding	Ldlr	exon	ENSMUSG00000032193	NonProperStrand	39	chr7	38468013	38468033	protein_coding	Zfp536	intron	ENSMUSG00000043456	ProperStrand	57	1	-14.2776
chr19	21037680	21037770	LINE	L1M2	L1	chr19L1M221037607	ProperStrand	1	chr19	21037502	21037582	SINE	B1_Mur1	Alu	chr19B1_Mur121037481	NonProperStrand	1	1	-inf
chr13	63444454	63444514	protein_coding	Fancc	intron	ENSMUSG00000021461	ProperStrand	11	chr7	52713924	52713956	protein_coding	Ftl1	exon	ENSMUSG00000050708	ProperStrand	807	1	-11.5743
chrX	16443758	16443776	LINE	L1_Mus3	L1	chrXL1_Mus316440645	ProperStrand	1	chr16	23110454	23110508	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-inf
chr5	130555369	130555388	protein_coding	Tpst1	utr5	ENSMUSG00000034118	ProperStrand	22	chr8	120133067	120133102	protein_coding	Plcg2	exon	ENSMUSG00000034330	ProperStrand	57	1	-15.4256
chr7	106535125	106535143	protein_coding	Gdpd5	intron	ENSMUSG00000035314	NonProperStrand	14	chr5	54389950	54389966	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	1	-13.7456
chr2	22444769	22444829	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	chr5	108334222	108334312	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	3	-1.7850
chr7	86604432	86604465	protein_coding	Polg	exon	ENSMUSG00000039176	ProperStrand	93	chr1	52990262	52990366	protein_coding	1700019D03Rik	intron	ENSMUSG00000043629	ProperStrand	39	23	-19.4421
chr3	142271083	142271138	protein_coding	Gbp1	exon	ENSMUSG00000028269	ProperStrand	1	chr17	13112498	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-inf
chr13	105596807	105597836	protein_coding	Cwc27	exon	ENSMUSG00000021715	ProperStrand	14	chr9	15119660	15119740	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.3767
chr15	32495431	32495511	protein_coding	Sema5a	intron	ENSMUSG00000022231	NonProperStrand	7	chr13	81396646	81396736	protein_coding	Gpr98	intron	ENSMUSG00000069170	NonProperStrand	22	1	-19.3146
chr9	65226551	65226631	protein_coding	Gm514	intron	ENSMUSG00000086228	ProperStrand	8	chr11	6428076	6428166	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-16.7091
chr1	88024749	88024849	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	chr9	65049532	65049605	snRNA	ENSMUSG00000075930_U5	.	ENSMUSG00000075930	ProperStrand	175	1	-6.3782
chr1	24621377	24621394	protein_coding	Gm10925	exon	ENSMUSG00000090378	NonProperStrand	70	chr9	15119654	15119711	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.3660
chr2	154238053	154238162	SINE	RSINE1	B4	chr2RSINE1154238060	NonProperStrand	1	chr16	23110991	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr4	32334807	32334897	protein_coding-noncoding	Bach2	utr5	ENSMUSG00000040270	ProperStrand	1	chr4	32334506	32334586	protein_coding	Bach2	intron	ENSMUSG00000040270	ProperStrand	14	1	-inf
chr1	34224768	34224834	protein_coding	Dst	exon	ENSMUSG00000026131	ProperStrand	461	chr7	51505242	51505308	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	1	-4.1663
chr11	113688380	113688396	protein_coding	Sdk2	exon	ENSMUSG00000041592	ProperStrand	17	chr5	108336363	108336422	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-7.3855
chr18	34787446	34787489	protein_coding	Kif20a	exon	ENSMUSG00000003779	ProperStrand	50	chr11	69560613	69560654	protein_coding	Polr2a	exon	ENSMUSG00000005198	ProperStrand	200	2	-17.6561
chr3	96363028	96364144	protein_coding	Txnip	exon	ENSMUSG00000038393	ProperStrand	172	chr2	158182156	158182263	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	2	-5.2266
chr11	84722945	84722961	protein_coding	Myo19	exon	ENSMUSG00000020527	ProperStrand	82	chr13	51743568	51743628	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-6.2422
chr11	48614368	48614426	snoRNA	ENSMUSG00000064500_SNORD95	.	ENSMUSG00000064500	ProperStrand	100	chr3	88497879	88497979	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-6.4469
chr10	116797912	116797962	protein_coding	Cpsf6	exon	ENSMUSG00000055531	ProperStrand	86	chr9	120038467	120038549	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	4	-8.7651
chr11	116535950	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr9	64022854	64022923	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	2	-2.3666
chr11	106852013	106852042	protein_coding	Kpna2	exon	ENSMUSG00000018362	ProperStrand	70	chr7	116664830	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-4.0747
chr8	36529522	36529538	protein_coding	Eri1	utr3	ENSMUSG00000031527	NonProperStrand	97	chr17	24857716	24857775	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.5374
chr5	143665183	143666132	protein_coding	Actb	exon	ENSMUSG00000029580	ProperStrand	446	chr11	62418046	62418089	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	2	-3.4603
chr11	116535507	116535531	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr1	129228451	129228520	snoRNA	ENSMUSG00000093146_AC131793.1	.	ENSMUSG00000093146	ProperStrand	119	1	-4.5822
chrX	147500880	147501325	protein_coding	Fgd1	utr5	ENSMUSG00000025265	ProperStrand	96	chr19	8963096	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	5	-8.2797
chr17	36027956	36028003	protein_coding	Dhx16	exon	ENSMUSG00000024422	ProperStrand	28	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-4.6667
chr5	127737478	127737494	antisense	1700085B03Rik	.	ENSMUSG00000087104	ProperStrand	55	chr6	47738067	47738106	misc_RNA	Y_RNA	.	ENSMUSG00000065701	ProperStrand	129	1	-11.9517
chr12	111932326	111932426	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr11	62416578	62416656	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-0.8976
chr3	32237591	32237679	protein_coding	Zmat3	utr3	ENSMUSG00000027663	ProperStrand	62	chr9	63485639	63485719	protein_coding	Aagab	intron	ENSMUSG00000037257	ProperStrand	8	1	-17.2554
chr2	26207544	26207560	protein_coding	Dnlz	utr5	ENSMUSG00000075467	ProperStrand	6	chr17	35087919	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-9.9053
chr2	26493383	26493518	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr10	128257530	128257546	protein_coding	Ormdl2	utr5	ENSMUSG00000025353	ProperStrand	51	1	-6.5161
chr10	75322195	75322262	protein_coding	Mif	utr3	ENSMUSG00000033307	ProperStrand	146	chr5	130300416	130300516	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	4	-5.0761
chr17	27559700	27559717	protein_coding	Grm4	utr3	ENSMUSG00000063239	ProperStrand	147	chr9	64143736	64143873	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	5	-inf
chr7	148587897	148588101	protein_coding	Taldo1	exon	ENSMUSG00000025503	ProperStrand	28	chr3	123210904	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.3984
chr2	133379151	133379169	protein_coding	Bmp2	intron	ENSMUSG00000027358	ProperStrand	2	chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-13.8971
chr12	87861937	87862478	protein_coding	Esrrb	utr3	ENSMUSG00000021255	ProperStrand	254	chr19	8963062	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-0.9067
chr1	93342189	93345290	protein_coding	Per2	exon	ENSMUSG00000055866	ProperStrand	114	chr19	8798740	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-3.5891
chr13	113694987	113695077	protein_coding	Skiv2l2	intron	ENSMUSG00000016018	ProperStrand	55	chr18	35714169	35714249	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	3	-8.9372
chr8	115224096	115224186	protein_coding	Cntnap4	intron	ENSMUSG00000031772	ProperStrand	8	chr4	56910510	56910590	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-10.2137
chr1	133807259	133815613	protein_coding	Nucks1	utr5	ENSMUSG00000026434	ProperStrand	59	chrX	12264318	12266461	protein_coding	Med14	exon	ENSMUSG00000064127	NonProperStrand	22	1	-15.3757
chr19	44188388	44188457	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr13	23713832	23713921	protein_coding	Hist1h1e	exon	ENSMUSG00000051627	ProperStrand	41	3	-19.2286
chr11	116535492	116535531	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr14	57312843	57312971	protein_coding	Mphosph8	intron	ENSMUSG00000079184	NonProperStrand	27	1	-7.5009
chr3	52388277	52388294	SINE	B4A	B4	chr3B4A52388218	ProperStrand	169	chr19	8798484	8798514	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-3.2594
chr9	121382506	121382522	protein_coding	Trak1	utr3	ENSMUSG00000032536	NonProperStrand	19	chr11	114619077	114619093	protein_coding	Dnaic2	utr3	ENSMUSG00000034706	ProperStrand	10	1	-18.8818
chr11	102537179	102537211	protein_coding	Gm1564	exon	ENSMUSG00000051455	ProperStrand	3	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-14.0854
chr1	33828651	33828669	protein_coding	Zfp451	intron	ENSMUSG00000042197	NonProperStrand	393	chr9	120037898	120037918	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-1.4339
chr13	50116851	50116931	LINE	L1Md_A	L1	chr13L1Md_A50110523	ProperStrand	3	chr17	4082143	4082235	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	2	-inf
chr8	72856347	72856528	protein_coding	Upf1	utr3	ENSMUSG00000058301	ProperStrand	90	chr18	35716785	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-2.8683
chr1	95206779	95227075	protein_coding	Pask	intron	ENSMUSG00000026274	ProperStrand	20	chr5	130300449	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	5	-18.7217
chr8	87525135	87525238	protein_coding	Hook2	exon	ENSMUSG00000052566	ProperStrand	204	chr8	73419735	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-1.1686
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr7	116665190	116665241	protein_coding	Rpl27a	exon	ENSMUSG00000046364	ProperStrand	149	2	-10.5133
chr10	7626409	7626480	protein_coding	Tab2	utr3	ENSMUSG00000015755	ProperStrand	41	chr4	70018457	70018495	protein_coding	Cdk5rap2	intron	ENSMUSG00000039298	ProperStrand	810	1	-8.8736
chr5	123622050	123622066	protein_coding	Hpd	exon	ENSMUSG00000029445	ProperStrand	254	chr3	145601279	145601865	protein_coding	2410004B18Rik	exon	ENSMUSG00000036873	ProperStrand	10	1	-14.0836
chr7	117166824	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	chr2	130103751	130103798	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-0.8099
chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	chr1	88247800	88247876	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	2	-2.3329
chr12	86136022	86136038	protein_coding	Ltbp2	exon	ENSMUSG00000002020	ProperStrand	14	chr1	162965530	162965571	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-9.9854
chr9	78008292	78008495	protein_coding	Ick	exon	ENSMUSG00000009828	ProperStrand	6	chr7	29136628	29136651	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-6.8330
chr18	75539246	75539344	protein_coding	Smad7	intron	ENSMUSG00000025880	ProperStrand	83	chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	1	-8.7471
chr4	155232504	155232594	protein_coding	Dvl1	utr3	ENSMUSG00000029071	ProperStrand	21	chr19	8963096	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.1775
chr12	102206209	102206237	protein_coding	Ccdc88c	intron	ENSMUSG00000021182	ProperStrand	151	chr3	88497852	88497980	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-5.6387
chr9	105830520	105830539	protein_coding	Col6a5	exon	ENSMUSG00000091345	NonProperStrand	6	chr1	88247740	88247804	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	3	-19.9875
chr11	101323722	101323762	protein_coding	Vat1	exon	ENSMUSG00000034993	ProperStrand	69	chr3	123210854	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-3.3699
chr4	131908357	131908456	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr4	86232430	86232488	snoRNA	ENSMUSG00000088958_Scarna8	.	ENSMUSG00000088958	ProperStrand	366	1	-3.7574
chr9	59516860	59516883	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr9	64022894	64022923	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-2.2117
mmu-miR-6240	1	23	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr3	152381956	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	2	-3.2871
chr5	76569529	76569545	protein_coding	Srd5a3	exon	ENSMUSG00000029233	ProperStrand	11	chr7	149170855	149171340	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	1	-14.7208
chr4	24448437	24448492	protein_coding	Mms22l	intron	ENSMUSG00000045751	ProperStrand	21	chr10	110918641	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-8.9950
chr5	92859870	92859958	protein_coding	Nup54	exon	ENSMUSG00000034826	ProperStrand	16	chr10	23505578	23505620	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-10.2251
chr9	15130702	15130802	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	chr8	32260335	32260370	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-1.1477
mmu-miR-6240	2	23	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr9	15121198	15121260	snoRNA	ENSMUSG00000065663_SNORA25	.	ENSMUSG00000065663	ProperStrand	2	2	-inf
chr5	31093938	31093956	protein_coding	Dpysl5	exon	ENSMUSG00000029168	NonProperStrand	38	chr10	23505187	23505213	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.9123
chr1	65118230	65118247	protein_coding	Crygc	exon	ENSMUSG00000025952	ProperStrand	12	chr3	88715213	88715230	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-10.5024
chr11	29210944	29211024	LTR	ORR1D2	MaLR	chr11ORR1D229210664	ProperStrand	1	chr11	29211146	29211236	SINE	B4	B4	chr11B429211049	ProperStrand	1	1	-inf
chr13	100214218	100278109	protein_coding	Mtap1b	exon	ENSMUSG00000052727	ProperStrand	76	chr14	33005038	33005093	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	6	-18.2217
chr16	91655806	91655892	protein_coding	Son	exon	ENSMUSG00000022961	ProperStrand	59	chr10	23505156	23505246	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.2562
chr4	122264167	122264184	pseudogene	Gm12877	.	ENSMUSG00000081377	NonProperStrand	16	chr11	106362568	106362642	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-10.0783
chr15	57496012	57496032	LTR	RMER15	ERVL	chr15RMER1557495890	NonProperStrand	10	chr7	25288633	25288656	protein_coding	Cadm4	utr3	ENSMUSG00000054793	ProperStrand	6	1	-19.4901
chr4	123594913	123597094	protein_coding	Rragc	exon	ENSMUSG00000028646	ProperStrand	6	chr10	23505169	23505219	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-18.1125
chr10	119498369	119498387	protein_coding	Grip1	intron	ENSMUSG00000034813	NonProperStrand	28	chr2	5219721	5219795	protein_coding	Camk1d	utr3	ENSMUSG00000039145	ProperStrand	50	1	-15.2098
chr5	143577092	143579018	protein_coding	Tnrc18	utr5	ENSMUSG00000039477	ProperStrand	39	chr18	73693164	73693187	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-6.3732
chr1	33828651	33828669	protein_coding	Zfp451	intron	ENSMUSG00000042197	NonProperStrand	393	chr11	69734821	69734871	protein_coding	Eif5a	utr5	ENSMUSG00000078812	ProperStrand	164	1	-7.5410
chr11	62416574	62416599	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr2	158182156	158182201	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	2	-2.3837
chr9	19180011	19180028	protein_coding	Olfr847	exon	ENSMUSG00000059821	NonProperStrand	2	chr5	121655016	121655154	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-inf
chr2	156949096	156949112	protein_coding	Samhd1	exon	ENSMUSG00000027639	NonProperStrand	1	chr6	115758011	115758111	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-inf
chr9	15130904	15130994	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	chr14	76247740	76247820	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	7	-8.9171
chr11	59982057	59982143	protein_coding	Rai1	intron	ENSMUSG00000062115	ProperStrand	25	chr5	130300492	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.1053
chr12	3910890	3910990	protein_coding	Dnmt3a	utr3	ENSMUSG00000020661	ProperStrand	40	chr10	80641696	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	9	-20.7481
chr9	63868722	63868738	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	chr6	71832550	71832687	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	4	-5.8731
chr11	3426352	3426368	protein_coding	Smtn	exon	ENSMUSG00000020439	ProperStrand	222	chr10	127520959	127520999	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	1	-6.0712
chr5	123823893	123823993	protein_coding	Bcl7a	utr3	ENSMUSG00000029438	ProperStrand	27	chr9	120038564	120038588	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.5315
chr16	23111465	23111511	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr1	135555729	135555790	protein_coding	Zc3h11a	intron	ENSMUSG00000026464	ProperStrand	102	2	-12.6918
chr5	122199227	122222740	protein_coding	Atxn2	utr5	ENSMUSG00000042605	ProperStrand	83	chr9	64022879	64022921	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	2	-11.8295
chr10	7482609	7482625	protein_coding	Katna1	utr3	ENSMUSG00000019794	ProperStrand	14	chr16	23110962	23110999	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.2008
chr7	51794324	51794496	protein_coding	Pold1	exon	ENSMUSG00000038644	ProperStrand	50	chr19	8799833	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-5.3011
chr14	72961501	72963322	protein_coding	Fndc3a	exon	ENSMUSG00000033487	ProperStrand	84	chr2	41199972	41199989	protein_coding	Lrp1b	exon	ENSMUSG00000049252	ProperStrand	376	2	-14.2176
chr18	36927846	36929740	protein_coding	Hars	exon	ENSMUSG00000001380	ProperStrand	23	chr4	131908379	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.9964
chr14	70186026	70186050	protein_coding	Rhobtb2	utr3	ENSMUSG00000022075	ProperStrand	22	chr3	123210854	123210897	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.8504
chr4	149026816	149026832	protein_coding	Pik3cd	exon	ENSMUSG00000039936	ProperStrand	151	chr11	98878344	98878370	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-4.4916
chr18	42848251	42848269	protein_coding	Ppp2r2b	intron	ENSMUSG00000024500	NonProperStrand	95	chr11	6428035	6428087	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.3874
chr9	83678799	83681879	protein_coding	Elovl4	exon	ENSMUSG00000032262	ProperStrand	159	chr5	130300473	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	5	-6.3524
chr15	82320288	82320368	LINE	L1Md_F3	L1	chr15L1Md_F382318627	NonProperStrand	1	chr7	54443189	54443279	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	1	-inf
chr9	63042015	63042031	protein_coding	Map2k5	exon	ENSMUSG00000058444	ProperStrand	193	chr1	162967734	162967806	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	1	-7.9114
chr17	23952839	23952859	protein_coding	Srrm2	exon	ENSMUSG00000039218	ProperStrand	521	chr1	62686775	62686791	protein_coding	Pard3b	utr3	ENSMUSG00000046526	ProperStrand	31	1	-10.3183
chr18	10052131	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr3	19915612	19915628	protein_coding-noncoding	Hps3	utr3	ENSMUSG00000027615	ProperStrand	1	1	-inf
chr1	63224438	63225055	protein_coding	Eef1b2	exon	ENSMUSG00000025967	ProperStrand	106	chr2	26494725	26494815	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.1267
chr4	55431651	55431705	lincRNA	Gm12505	exon	ENSMUSG00000087070	ProperStrand	447	chr1	88247801	88247875	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	2	-2.8713
chr14	65372803	65372882	snoRNA	ENSMUSG00000064442_SNORA36	.	ENSMUSG00000064442	ProperStrand	296	chr9	15118285	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	5	-5.9256
chr3	55987230	55987246	protein_coding	Nbea	utr5	ENSMUSG00000027799	NonProperStrand	115	chr2	26493366	26493466	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-4.5165
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr19	59376129	59376157	protein_coding	Pdzd8	exon	ENSMUSG00000074746	ProperStrand	42	1	-8.6897
chr15	36700831	36700931	protein_coding	Ywhaz	utr3	ENSMUSG00000022285	ProperStrand	73	chr9	120039637	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.9654
chr11	48615818	48615834	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	chr5	74489595	74489674	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-0.9448
chr1	56941648	56941707	protein_coding	Satb2	intron	ENSMUSG00000038331	ProperStrand	5	chr5	115939501	115939591	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	2	-18.8879
chr11	79243377	79243395	protein_coding-noncoding	Nf1	utr5	ENSMUSG00000020716	NonProperStrand	1	chr10	23506278	23506347	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-inf
chr6	28695230	28695320	protein_coding	Snd1	exon	ENSMUSG00000001424	ProperStrand	210	chr18	33954845	33954925	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	13	-inf
chr14	61398407	61398423	protein_coding	C1qtnf9	exon	ENSMUSG00000071347	ProperStrand	187	chr7	29136554	29136574	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-0.7403
chr10	86156209	86156682	protein_coding	Hsp90b1	exon	ENSMUSG00000020048	ProperStrand	396	chr10	23505152	23505211	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	7	-0.8826
chr19	44378176	44378276	protein_coding	Scd2	utr3	ENSMUSG00000025203	ProperStrand	219	chr19	8799588	8799644	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	7	-inf
chr11	87240282	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	chr1	162965527	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-2.5922
chr8	109896153	109896243	protein_coding	Nfat5	utr3	ENSMUSG00000003847	ProperStrand	29	chr11	6428078	6428158	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.5563
chr8	119984375	119984440	protein_coding	4933407C03Rik	utr3	ENSMUSG00000034390	ProperStrand	48	chr17	13112450	13112526	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	4	-15.6204
chr11	68864627	68864681	protein_coding	Aurkb	utr3	ENSMUSG00000020897	ProperStrand	11	chr15	75828058	75828074	protein_coding	Mapk15	exon	ENSMUSG00000063704	NonProperStrand	14	1	-inf
chr14	15572353	15572371	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr19	29678580	29678596	protein_coding	C030046E11Rik	exon	ENSMUSG00000038658	ProperStrand	104	1	-10.1789
chrX	106029272	106029494	protein_coding	Brwd3	utr5	ENSMUSG00000063663	ProperStrand	16	chr4	131865855	131865935	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.1079
chr11	120679322	120679358	protein_coding	Fasn	exon	ENSMUSG00000025153	ProperStrand	298	chr17	35299504	35299560	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-1.9075
chr18	73693121	73693147	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr1	194571766	194571810	snRNA	ENSMUSG00000064881_U5	.	ENSMUSG00000064881	ProperStrand	187	1	-3.3680
chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	chr6	115757992	115758132	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	2	-0.9235
chr7	108971290	108971306	protein_coding	Inppl1	utr3	ENSMUSG00000032737	ProperStrand	272	chr1	162965531	162965598	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-1.8169
chr5	142459852	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	chr12	83538584	83538700	protein_coding	Sipa1l1	intron	ENSMUSG00000042700	ProperStrand	84	3	-inf
chr14	67618426	67618508	protein_coding	Bnip3l	exon	ENSMUSG00000022051	ProperStrand	30	chr18	35716759	35716849	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.3863
chr16	36079545	36079626	protein_coding	Ccdc58	intron	ENSMUSG00000075229	ProperStrand	18	chr16	23111393	23111483	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.2408
mmu-miR-5100	5	20	miRNA	mmu-miR-5100	.	mmu-miR-5100	ProperStrand	132	chr4	132394375	132394462	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	3	-16.9341
chrX	156315499	156315519	protein_coding	Sh3kbp1	intron	ENSMUSG00000040990	ProperStrand	67	chr8	98270015	98270095	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-5.3261
chr15	12789149	12791457	protein_coding	Drosha	exon	ENSMUSG00000022191	ProperStrand	163	chr5	108334235	108334325	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-2.9604
chrX	71589890	71589908	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr9	15119646	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	8	-7.9478
chr1	175297744	175297760	protein_coding	Aim2	intron	ENSMUSG00000037860	ProperStrand	16	chr4	131908689	131908737	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.4136
chr7	31370565	31370622	protein_coding	Wbp7	exon	ENSMUSG00000006307	ProperStrand	180	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-4.7761
chr2	30982094	30982111	protein_coding	Fnbp1	intron	ENSMUSG00000075415	ProperStrand	53	chr18	35716683	35716761	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.3768
chr4	43505771	43505861	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr15	59194872	59197724	protein_coding	E430025E21Rik	exon	ENSMUSG00000022350	ProperStrand	18	1	-5.3613
chr1	162965548	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr13	49779667	49779805	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	7	-0.8500
chr11	116535952	116535982	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr13	52741517	52741560	protein_coding	Syk	utr3	ENSMUSG00000021457	ProperStrand	20	1	-8.1087
chr3	67161283	67161299	protein_coding	Rsrc1	utr3	ENSMUSG00000034544	NonProperStrand	71	chr9	110294560	110295021	protein_coding	Ptpn23	exon	ENSMUSG00000036057	ProperStrand	34	1	-14.1211
chr12	110874223	110874291	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	chr7	118219574	118219617	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-1.3384
chr9	24549583	24549618	protein_coding	Tbx20	intron	ENSMUSG00000031965	NonProperStrand	110	chr16	23110911	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	10	-5.1694
chr14	45949538	45949554	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	chr15	79908958	79909019	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-2.3482
chr16	91227718	91227735	protein_coding	Olig2	utr3	ENSMUSG00000039830	NonProperStrand	78	chr12	16946852	16946921	snoRNA	ENSMUSG00000064620_SNORA32	.	ENSMUSG00000064620	ProperStrand	165	3	-19.2086
chr3	67161283	67161299	protein_coding	Rsrc1	utr3	ENSMUSG00000034544	NonProperStrand	71	chr16	17259213	17259253	protein_coding	Hic2	exon	ENSMUSG00000050240	ProperStrand	36	1	-14.0064
chr7	24713726	24713742	protein_coding	Vmn1r179	exon	ENSMUSG00000046924	NonProperStrand	69	chr16	23111689	23111753	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.6857
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr5	145314304	145314351	protein_coding	Nptx2	exon	ENSMUSG00000059991	ProperStrand	15	1	-14.1888
chr1	89673598	89673715	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	chr1	173041610	173041649	tRNA	tRNA710-ValCAC	.	634665	ProperStrand	206	2	-2.4024
chrX	148461148	148461228	protein_coding	Smc1a	exon	ENSMUSG00000041133	ProperStrand	104	chr4	147131858	147135340	protein_coding	Gm13157	exon	ENSMUSG00000078495	ProperStrand	13	7	-inf
chr11	78075363	78086997	protein_coding	2610507B11Rik	exon	ENSMUSG00000010277	ProperStrand	246	chr19	8963027	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	6	-4.8785
chr17	61486675	61486696	LINE	Lx2	L1	chr17Lx261486018	ProperStrand	3	chr11	68886928	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-10.4040
chr9	78326468	78327292	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	15	-2.9378
chr8	86621106	86621157	protein_coding	Dcaf15	utr3	ENSMUSG00000037103	ProperStrand	32	chr15	34370545	34370623	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-4.7407
chr15	81195548	81195628	protein_coding	St13	utr3	ENSMUSG00000022403	ProperStrand	59	chr5	121655065	121655155	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.7789
chr15	98350140	98350184	protein_coding	2310037I24Rik	intron	ENSMUSG00000022992	ProperStrand	91	chr15	98350191	98350287	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	8	-inf
chr14	77424372	77424388	protein_coding	9030625A04Rik	utr3	ENSMUSG00000044350	NonProperStrand	152	chr2	91436231	91436260	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-5.6625
chr6	54379743	54379760	lincRNA	9130019P16Rik	exon	ENSMUSG00000073067	ProperStrand	255	chr13	96372675	96372764	protein_coding	F2r	utr3	ENSMUSG00000048376	ProperStrand	9	1	-14.3023
chr15	82958134	82958224	protein_coding	Poldip3	utr3	ENSMUSG00000041815	ProperStrand	57	chr15	34370578	34370658	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-3.6440
chr11	77995191	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	chr1	172975127	172975189	tRNA	tRNA699-GlyGCC	.	350684	ProperStrand	660	1	-1.7979
chr8	61858707	61858726	LTR	RMER13B	ERVK	chr8RMER13B61858589	NonProperStrand	22	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-7.1904
chr4	147514736	147514753	protein_coding	Mad2l2	utr5	ENSMUSG00000029003	ProperStrand	17	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-11.1499
chr11	69218338	69218410	protein_coding	Kdm6b	exon	ENSMUSG00000018476	ProperStrand	76	chr3	95980295	95980385	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-6.3895
chr7	136800631	136800649	SINE	RSINE1	B4	chr7RSINE1136800606	ProperStrand	216	chr4	122970393	122970449	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-4.9016
chr11	6428054	6428176	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr4	131866154	131866285	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	53	-2.9239
chr6	108616080	108616129	protein_coding	Bhlhe40	utr3	ENSMUSG00000030103	ProperStrand	11	chr7	116664872	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-5.7738
chr16	23110993	23111010	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr19	8799829	8799895	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-1.2351
chr12	88778782	88778827	protein_coding	Alkbh1	intron	ENSMUSG00000079036	ProperStrand	70	chr14	76372292	76372395	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	1	-8.6818
chr1	74617325	74617384	protein_coding	Zfp142	exon	ENSMUSG00000026135	ProperStrand	22	chr12	109460710	109460726	protein_coding	Ccdc85c	intron	ENSMUSG00000084883	ProperStrand	157	1	-13.4195
chr11	87240282	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	chr4	131865869	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	8	-7.2524
chr2	119595690	119595753	protein_coding	Rpap1	exon	ENSMUSG00000034032	ProperStrand	96	chr7	116663648	116663712	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.7447
chr4	57156388	57156407	Low_complexity	GC_rich	Low_complexity	chr4GC_rich57156357	NonProperStrand	5	chr7	116664811	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-7.4478
chr19	57958634	57958655	protein_coding	Atrnl1	intron	ENSMUSG00000054843	NonProperStrand	11	chr7	148634714	148634774	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-7.3454
chr10	62320141	62341869	protein_coding	Tet1	exon	ENSMUSG00000047146	ProperStrand	286	chr9	15119646	15119736	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-1.0491
chr1	78447202	78447245	protein_coding	Farsb	intron	ENSMUSG00000026245	ProperStrand	40	chr16	23110476	23110576	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.1765
chr12	88778626	88778679	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	chr7	51505506	51505531	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	2	-4.0286
chr4	130305586	130305620	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	chr11	77996576	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	2	-4.9907
chr11	6428035	6428088	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr7	67123693	67123758	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	5	-3.8913
chr15	94602149	94602167	protein_coding	Tmem117	intron	ENSMUSG00000063296	NonProperStrand	31	chr17	35089181	35089232	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-6.7915
chr2	90235296	90235341	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr15	96127832	96127848	protein_coding	Arid2	intron	ENSMUSG00000033237	NonProperStrand	13	1	-7.5011
chr7	123280884	123283872	protein_coding	Plekha7	exon	ENSMUSG00000045659	ProperStrand	66	chrX	34622991	34623037	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-5.1875
chr14	51463983	51463999	protein_coding	Tep1	exon	ENSMUSG00000006281	NonProperStrand	73	chr4	59233282	59233311	protein_coding	Ugcg	utr3	ENSMUSG00000028381	ProperStrand	19	1	-15.2502
chr2	93633270	93633286	protein_coding	Ext2	intron	ENSMUSG00000027198	ProperStrand	49	chrX	84483704	84483727	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-8.6550
mmu-miR-6240	1	23	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr7	52309977	52309993	protein_coding	Prrg2	exon	ENSMUSG00000007837	NonProperStrand	281	1	-2.9864
chr2	90235291	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	34918678	34918694	protein_coding	Pank1	intron	ENSMUSG00000033610	ProperStrand	6	1	-9.1372
chr11	94072931	94073021	protein_coding	Tob1	utr5	ENSMUSG00000037573	ProperStrand	4	chr15	34370569	34370649	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-9.0741
chr7	116663563	116663637	protein_coding-noncoding	Rpl27a	utr5	ENSMUSG00000046364	ProperStrand	57	chr1	93263065	93263081	protein_coding	Fam132b	exon	ENSMUSG00000047443	NonProperStrand	98	2	-18.6270
chr17	33966627	33966727	protein_coding	Ndufa7	exon	ENSMUSG00000041881	ProperStrand	64	chr1	162966245	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-7.4473
chr10	80771806	80771823	protein_coding	Pip5k1c	exon	ENSMUSG00000034902	NonProperStrand	6	chr11	106362640	106362694	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-12.1528
chr3	82816757	82816774	protein_coding	Fgg	exon	ENSMUSG00000033860	NonProperStrand	321	chr7	30066635	30066770	protein_coding	Spint2	utr5	ENSMUSG00000074227	ProperStrand	82	1	-9.3258
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr8	13876174	13876226	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-1.3338
chr2	37431985	37502742	protein_coding	Strbp	utr5	ENSMUSG00000026915	ProperStrand	90	chr19	8963027	8963165	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-3.0219
chr8	86195619	86195674	protein_coding	Pkn1	exon	ENSMUSG00000057672	ProperStrand	36	chr4	131908689	131908739	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.9880
chr5	52562059	52562126	protein_coding	Dhx15	intron	ENSMUSG00000029169	ProperStrand	53	chr9	15119675	15119712	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	4	-9.9963
chr11	98190871	98190888	protein_coding	Neurod2	utr5	ENSMUSG00000038255	ProperStrand	15	chr5	121655016	121655098	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-6.4555
chr13	55739458	55739537	protein_coding	Ddx46	exon	ENSMUSG00000021500	ProperStrand	87	chr16	23111464	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-3.9734
chr10	25191437	25198820	protein_coding	Epb4.1l2	utr5	ENSMUSG00000019978	ProperStrand	105	chr1	88252850	88252901	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-5.5397
chr15	88695819	88695852	protein_coding	Pim3	utr3	ENSMUSG00000035828	ProperStrand	66	chr5	130300495	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.3476
chr9	15120982	15121072	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	chr14	76372346	76372426	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	1	-5.4300
chr13	9833564	9833682	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr18	31741293	31741312	protein_coding	Slc25a46	utr3	ENSMUSG00000024259	ProperStrand	5	1	-10.0546
chr17	56257328	56257344	LTR	RLTR25B	ERVK	chr17RLTR25B56257276	NonProperStrand	75	chrX	155815462	155815483	protein_coding	Eif1ax	exon	ENSMUSG00000067194	ProperStrand	18	1	-15.3060
chr2	60131868	60131924	protein_coding	Ly75	exon	ENSMUSG00000026980	ProperStrand	59	chr2	130103438	130103502	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-8.0970
chr14	22441145	22441210	protein_coding	Myst4	intron	ENSMUSG00000021767	ProperStrand	151	chr18	75160711	75160759	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	2	-11.7756
chr11	78086743	78086784	protein_coding	2610507B11Rik	exon	ENSMUSG00000010277	NonProperStrand	2	chr7	116663633	116663733	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	NonProperStrand	51	2	-inf
chr12	103160903	103161006	protein_coding	Atxn3	utr3	ENSMUSG00000021189	ProperStrand	20	chr2	130103451	130103501	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	9	-21.9909
chr17	8735100	8735117	protein_coding	Pde10a	intron	ENSMUSG00000023868	NonProperStrand	78	chr9	78326479	78326540	protein_coding	Eef1a1	utr3	ENSMUSG00000037742	ProperStrand	1990	1	-5.8178
chr9	103401280	103401296	protein_coding	Tmem108	exon	ENSMUSG00000042757	NonProperStrand	323	chr5	121655016	121655096	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-1.0129
chr1	177622593	177622614	protein_coding	Opn3	exon	ENSMUSG00000026525	ProperStrand	31	chr19	8799012	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-7.1438
chr2	26233013	26233111	protein_coding	Snapc4	intron	ENSMUSG00000036281	ProperStrand	19	chr5	143648093	143648130	protein_coding	Fbxl18	exon	ENSMUSG00000066640	ProperStrand	64	5	-inf
chr8	13416895	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr7	118219574	118219740	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	15	-7.8415
chr11	77995191	77995226	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	chr13	90238585	90238665	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	2	-3.4459
chr5	31822475	31822575	protein_coding	Supt7l	exon	ENSMUSG00000053134	ProperStrand	7	chr11	77996558	77996619	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-10.4853
chr5	42136455	42136473	Low_complexity	GA-rich	Low_complexity	chr5GA-rich42136449	NonProperStrand	106	chr2	158043261	158043311	protein_coding	D630003M21Rik	exon	ENSMUSG00000037813	ProperStrand	2	2	-inf
chr10	110934364	110934435	protein_coding	Nap1l1	utr3	ENSMUSG00000058799	ProperStrand	185	chr17	35088957	35088976	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	3	-9.1107
chr5	3693225	3693241	protein_coding	Ankib1	exon	ENSMUSG00000040351	NonProperStrand	98	chr2	130484597	130484613	protein_coding	Ddrgk1	intron	ENSMUSG00000068290	ProperStrand	43	1	-13.0009
chr1	183838473	183841768	protein_coding	Enah	intron	ENSMUSG00000022995	ProperStrand	196	chr2	127307887	127307904	protein_coding	Kcnip3	utr5	ENSMUSG00000079056	ProperStrand	14	1	-13.9075
chr11	116462655	116462684	protein_coding	Rhbdf2	exon	ENSMUSG00000020806	ProperStrand	20	chr4	131908689	131908746	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.0012
chr2	164311966	164311983	protein_coding	Dbndd2	utr5	ENSMUSG00000017734	ProperStrand	53	chr9	78057071	78057125	protein_coding	Gsta4	utr3	ENSMUSG00000032348	ProperStrand	82	1	-12.9355
chr7	13516169	13516208	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr13	21351673	21351710	tRNA	tRNA71-AlaAGC	.	1286210	ProperStrand	13	1	-11.7783
chr5	108336257	108336295	protein_coding	Rpl5	exon	ENSMUSG00000058558	ProperStrand	235	chr18	35714187	35714216	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	3	-3.6967
chr5	130476359	130476639	protein_coding	Gusb	exon	ENSMUSG00000025534	ProperStrand	16	chr10	107800794	107800854	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	1	-10.7495
chrX	34335747	34335823	protein_coding	Slc25a5	exon	ENSMUSG00000016319	ProperStrand	55	chr7	116664841	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	6	-15.2641
chr19	12910228	12910245	LTR	RMER20B	ERVK	chr19RMER20B12910189	NonProperStrand	5	chr17	56575882	56575912	protein_coding	Ptprs	intron	ENSMUSG00000013236	ProperStrand	152	1	-16.5383
chr19	38030975	38031019	protein_coding	Myof	exon	ENSMUSG00000048612	ProperStrand	37	chr10	23505152	23505214	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-3.5654
chr3	144748059	144749264	protein_coding	Clca5	exon	ENSMUSG00000036960	ProperStrand	86	chr4	131865855	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-2.3883
chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-1.0787
chr5	121828827	121828843	protein_coding	Trafd1	exon	ENSMUSG00000042726	ProperStrand	81	chr2	22445637	22445675	pseudogene	Gm13339	.	ENSMUSG00000082884	ProperStrand	24	1	-14.5669
chr1	16093358	16093623	protein_coding	Rpl7	exon	ENSMUSG00000043716	ProperStrand	93	chr19	8800386	8800466	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-2.7423
chr7	136800631	136800649	SINE	RSINE1	B4	chr7RSINE1136800606	ProperStrand	216	chr11	100357236	100357260	protein_coding	Acly	exon	ENSMUSG00000020917	ProperStrand	183	1	-8.5119
chr8	86201898	86214979	protein_coding	Pkn1	exon	ENSMUSG00000057672	ProperStrand	36	chr17	35089181	35089237	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	3	-14.8514
chr11	97023988	97024707	protein_coding	Kpnb1	exon	ENSMUSG00000001440	ProperStrand	197	chr9	15119731	15119760	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-1.7305
chr11	102265433	102265834	protein_coding	Slc25a39	exon	ENSMUSG00000018677	ProperStrand	35	chr9	15119350	15119430	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-6.1671
chr15	81238095	81238111	protein_coding	Xpnpep3	intron	ENSMUSG00000022401	ProperStrand	3	chr5	108334195	108334256	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-11.1157
chr13	107737212	107737228	protein_coding	Dimt1	utr5	ENSMUSG00000021692	ProperStrand	185	chr2	57090809	57090826	protein_coding	Gpd2	utr5	ENSMUSG00000026827	ProperStrand	93	1	-10.1740
chr6	134097815	134097831	protein_coding	Etv6	intron	ENSMUSG00000030199	NonProperStrand	77	chr16	23111385	23111434	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.9354
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr13	46862888	46862961	snoRNA	ENSMUSG00000064558_SNORA55	.	ENSMUSG00000064558	ProperStrand	187	2	-8.9834
chr17	69691910	69691927	LINE	L1MB3	L1	chr17L1MB369691730	ProperStrand	2	chr10	107599656	107635914	protein_coding	Ppp1r12a	exon	ENSMUSG00000019907	ProperStrand	65	1	-inf
chr7	138647641	138647731	protein_coding	Fgfr2	intron	ENSMUSG00000030849	ProperStrand	100	chr8	73419709	73419789	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.2440
chr16	5256015	5256031	protein_coding	Fam86	utr5	ENSMUSG00000022544	ProperStrand	231	chr2	75503601	75503664	protein_coding	Hnrnpa3	utr3	ENSMUSG00000059005	ProperStrand	289	1	-7.4706
chr7	53450891	53450907	protein_coding	Ush1c	utr3	ENSMUSG00000030838	ProperStrand	5	chr16	23110844	23110944	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr5	145638019	145638082	protein_coding	Smurf1	utr3	ENSMUSG00000038780	ProperStrand	45	chr8	126693300	126693318	protein_coding	Gm20388	intron	ENSMUSG00000092329	NonProperStrand	203	1	-11.4488
chr6	113465697	113465748	protein_coding	Tmem111	utr3	ENSMUSG00000030286	ProperStrand	10	chr2	158182156	158182197	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-8.6074
chr4	117546488	117546578	protein_coding	B4galt2	exon	ENSMUSG00000028541	ProperStrand	11	chr16	23110911	23110991	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.6241
chr7	93378766	93378785	protein_coding	Vmn2r76	exon	ENSMUSG00000091239	ProperStrand	1	chr16	23110891	23110940	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr11	95823723	95823775	protein_coding	Igf2bp1	utr3	ENSMUSG00000013415	ProperStrand	140	chr9	15119646	15119736	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.2931
chr7	28832042	28832075	protein_coding	Psmc4	exon	ENSMUSG00000030603	ProperStrand	1	chrX	93136011	93136027	protein_coding	Las1l	exon	ENSMUSG00000057421	ProperStrand	248	1	-inf
chr5	121007865	121007936	protein_coding	Tpcn1	exon	ENSMUSG00000032741	ProperStrand	15	chr3	153574606	153574654	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	1	-12.4927
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr14	68295464	68295495	protein_coding	Cdca2	exon	ENSMUSG00000048922	ProperStrand	50	1	-7.2876
chr6	125090466	125090546	protein_coding	Nop2	intron	ENSMUSG00000038279	ProperStrand	39	chr8	98269962	98270052	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-6.3909
chr3	121496789	121496834	protein_coding	Abcd3	intron	ENSMUSG00000028127	ProperStrand	10	chr18	35716812	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-13.2665
chr7	5435730	5437922	protein_coding	Vmn2r28	exon	ENSMUSG00000066820	ProperStrand	2	chr14	33005065	33005094	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-11.3397
chrX	84483699	84483750	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr8	81699701	81699718	protein_coding	Zfp827	intron	ENSMUSG00000071064	NonProperStrand	28	1	-9.7846
chr11	70412523	70412555	protein_coding	Mink1	exon	ENSMUSG00000020827	ProperStrand	113	chr18	53845651	53857249	protein_coding	Cep120	exon	ENSMUSG00000048799	ProperStrand	91	1	-11.2048
chr16	87485913	87485933	protein_coding	Cct8	exon	ENSMUSG00000025613	ProperStrand	65	chr5	77738902	77738918	protein_coding	Noa1	exon	ENSMUSG00000036285	ProperStrand	147	1	-11.3540
chr18	35339389	35410907	protein_coding	Ctnna1	exon	ENSMUSG00000037815	ProperStrand	115	chr17	24856620	24856737	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	2	-8.4680
chr1	183131570	183131617	protein_coding	Wdr26	intron	ENSMUSG00000038733	ProperStrand	9	chr7	116663682	116663772	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-6.1447
chr4	21922274	21922291	protein_coding-noncoding	6230409E13Rik	utr5	ENSMUSG00000028246	ProperStrand	18	chr12	17552961	17553030	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-7.4836
chr7	26070799	26074087	protein_coding	Cic	exon	ENSMUSG00000005442	ProperStrand	80	chr4	131865381	131865474	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	6	-18.2778
chr15	29997059	29997149	LINE	L1Md_F2	L1	chr15L1Md_F229996597	NonProperStrand	1	chr15	29997476	29997556	LTR	ETnERV2-int	ERVK	chr15ETnERV2-int29997181	NonProperStrand	1	1	-inf
chr1	36284332	36284418	protein_coding	Uggt1	exon	ENSMUSG00000037470	ProperStrand	67	chr3	123210854	123210889	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.8893
chr14	20622381	20624540	protein_coding	Nid2	exon	ENSMUSG00000021806	ProperStrand	372	chr13	90238602	90238692	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	1	-5.0492
chr11	78214287	78214304	antisense	Gm11194	.	ENSMUSG00000085747	ProperStrand	35	chr19	24336029	24336129	protein_coding	Fxn	utr3	ENSMUSG00000059363	ProperStrand	1	1	-inf
chr14	27436402	27438804	protein_coding	Fam116a	exon	ENSMUSG00000040818	ProperStrand	23	chr3	123210894	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.7662
chr13	64863287	64863304	protein_coding	Cntnap3	exon	ENSMUSG00000033063	ProperStrand	87	chr15	34370563	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	18	-19.4410
chr13	97948986	97949086	protein_coding	Gfm2	utr3	ENSMUSG00000021666	ProperStrand	26	chr16	23111381	23111449	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.5788
chr6	12543894	12543911	protein_coding	Thsd7a	intron	ENSMUSG00000032625	NonProperStrand	6	chr7	148634701	148634759	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-14.0110
chr15	103024657	103024731	protein_coding	Cbx5	utr3	ENSMUSG00000009575	ProperStrand	98	chr9	15514257	15514276	protein_coding	Slc36a4	exon	ENSMUSG00000043885	ProperStrand	94	1	-11.4248
chr5	74489202	74489254	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr8	109535233	109535297	protein_coding	Sntb2	utr3	ENSMUSG00000041308	ProperStrand	41	2	-10.3342
chr3	32607705	32607773	protein_coding	Actl6a	utr5	ENSMUSG00000027671	ProperStrand	31	chr1	89681322	89681398	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	2	-10.9099
chr18	46748230	46748260	protein_coding	Tmed7	exon	ENSMUSG00000033184	ProperStrand	15	chr11	83107867	83107902	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	1	-11.6529
chr19	5719336	5719352	protein_coding	Ehbp1l1	exon	ENSMUSG00000024937	ProperStrand	75	chr9	120039533	120039603	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.9174
chr8	75016109	75016127	protein_coding	Slc35e1	utr5	ENSMUSG00000019731	ProperStrand	23	chr4	131908809	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.7500
chr4	74051076	74051113	protein_coding	Kdm4c	utr3	ENSMUSG00000028397	ProperStrand	36	chr19	8963086	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.1678
chr18	32369404	32369421	protein_coding	Map3k2	exon	ENSMUSG00000024383	ProperStrand	9	chr11	69483172	69483272	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-6.0733
chr2	12941437	12941454	LTR	MTE2a	MaLR	chr2MTE2a12941159	NonProperStrand	42	chr17	26360446	26360514	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	1	-10.7477
chr11	102856417	102856440	protein_coding	Dcakd	exon	ENSMUSG00000020935	ProperStrand	61	chr9	85637591	85637607	protein_coding	Ibtk	utr5	ENSMUSG00000035941	NonProperStrand	22	1	-15.3194
chr7	120693572	120694591	protein_coding	Far1	exon	ENSMUSG00000030759	ProperStrand	72	chr4	131908267	131908347	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-3.6222
chr9	15119288	15119426	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	chr7	16524124	16524219	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	2	-3.4100
chr2	180468477	180468577	protein_coding	Slc17a9	intron	ENSMUSG00000023393	ProperStrand	7	chr17	66468411	66468427	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	1	-14.2903
chr1	34809912	34809958	protein_coding	Arhgef4	intron	ENSMUSG00000037509	ProperStrand	6	chr18	35716830	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-6.6008
chr13	19684241	19684258	protein_coding	Epdr1	utr3	ENSMUSG00000002808	ProperStrand	46	chr13	99513401	99513417	protein_coding	Fcho2	exon	ENSMUSG00000041685	NonProperStrand	11	1	-17.3541
chr11	102662205	102662285	protein_coding	Gjc1	exon	ENSMUSG00000034520	ProperStrand	15	chr14	33005140	33005230	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-6.7159
chr8	82224525	82224562	protein_coding	Abce1	exon	ENSMUSG00000058355	ProperStrand	66	chr11	68886928	68887018	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-3.9643
chr1	155754988	155755005	protein_coding	Glul	exon	ENSMUSG00000026473	ProperStrand	54	chr16	23111690	23111757	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.0726
chr5	124927861	124927877	protein_coding	Rilpl2	exon	ENSMUSG00000029401	ProperStrand	6	chr7	112630313	112630330	protein_coding	Prkcdbp	exon	ENSMUSG00000037060	ProperStrand	8	1	-18.4474
chr11	75316850	75316950	protein_coding	Prpf8	utr3	ENSMUSG00000020850	ProperStrand	255	chr1	162965986	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-1.2186
chr9	56785757	56785783	protein_coding	Imp3	exon	ENSMUSG00000032288	ProperStrand	3	chr11	69481335	69481380	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-9.3812
chr7	65389449	65389465	LINE	L1Md_F2	L1	chr7L1Md_F265388572	ProperStrand	4	chr11	62416951	62416976	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-11.6858
chrX	84483704	84483742	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr12	60141367	60141457	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	2	-3.7729
chr2	24825186	24827046	protein_coding	Wdr85	exon	ENSMUSG00000026975	ProperStrand	323	chr11	30672080	30672129	protein_coding	Psme4	exon	ENSMUSG00000040850	ProperStrand	40	1	-10.7578
chr15	102767411	102767427	protein_coding	Hoxc12	exon	ENSMUSG00000050328	NonProperStrand	3	chr19	8799831	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	2	-18.6824
chr8	27091218	27091234	protein_coding	4930444A02Rik	utr3	ENSMUSG00000037251	NonProperStrand	57	chr15	98356771	98356815	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	1	-7.8563
chr2	130109497	130109513	protein_coding	Idh3b	exon	ENSMUSG00000027406	ProperStrand	146	chr4	148539210	148539226	protein_coding	Pgd	exon	ENSMUSG00000028961	ProperStrand	34	1	-12.6757
chr18	35413886	35413989	protein_coding	Ctnna1	utr3	ENSMUSG00000037815	ProperStrand	115	chr13	90238587	90238609	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	1	-7.3493
chr15	79913288	79913341	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr4	130169384	130169441	protein_coding	Nkain1	utr3	ENSMUSG00000078532	ProperStrand	45	1	-4.1312
chr1	30862585	30887129	protein_coding	Phf3	exon	ENSMUSG00000048874	ProperStrand	102	chr17	24857716	24857853	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	3	-4.3033
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr9	64022854	64022944	protein_coding	Rpl4	intron	ENSMUSG00000032399	ProperStrand	608	1	-4.0639
chr1	88247741	88247876	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	chr19	8963025	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	66	-14.9721
chr11	95910028	95910089	protein_coding	Ube2z	utr3	ENSMUSG00000014349	ProperStrand	41	chr4	131865866	131865956	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.3878
chr16	57391760	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr11	68886964	68887025	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	4	-1.6695
chr5	108334195	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	13	-3.4369
chr19	6373633	6373708	protein_coding	Sf1	exon	ENSMUSG00000024949	ProperStrand	251	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-5.3352
chr17	12162496	12162515	protein_coding	Park2	intron	ENSMUSG00000023826	NonProperStrand	26	chr2	144087324	144087447	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-8.2197
chr7	106627435	106627857	protein_coding	Rps3	utr3	ENSMUSG00000030744	ProperStrand	159	chr7	116664793	116664869	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.0612
chr11	68884384	68884430	protein_coding	Tmem107	utr5	ENSMUSG00000020895	ProperStrand	5	chr16	23110912	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr9	54800580	54800596	protein_coding	Psma4	exon	ENSMUSG00000032301	ProperStrand	14	chr2	26768049	26768117	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	1	-11.3501
chr7	87858098	87858161	protein_coding	Iqgap1	utr3	ENSMUSG00000030536	ProperStrand	43	chr17	13112457	13112549	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-5.2244
chr13	104840853	104840869	protein_coding	Nln	exon	ENSMUSG00000021710	NonProperStrand	4	chr17	39985570	39985683	pseudogene	AY036118	.	ENSMUSG00000045999	ProperStrand	57	1	-18.7243
chr1	60535584	60535617	protein_coding	Abi2	utr3	ENSMUSG00000026782	ProperStrand	15	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-9.7858
chr6	101069047	101069137	LTR	ORR1E	MaLR	chr6ORR1E101068807	NonProperStrand	1	chr6	101069265	101069345	Simple_repeat	(CACAG)n	Simple_repeat	chr6(CACAG)n101069252	NonProperStrand	1	1	-inf
chr9	110293757	110294289	protein_coding	Ptpn23	exon	ENSMUSG00000036057	ProperStrand	34	chr16	23110455	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-5.9399
chr1	89377777	89377793	protein_coding	Ngef	exon	ENSMUSG00000026259	NonProperStrand	41	chr15	34370545	34370614	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-4.2640
chr5	92387014	92391663	protein_coding	Rchy1	exon	ENSMUSG00000029397	NonProperStrand	12	chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	1	-14.9682
chr9	50816824	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	chr2	161350192	161350209	protein_coding	Ptprt	utr3	ENSMUSG00000053141	NonProperStrand	46	1	-12.3440
chr8	123090861	123090877	protein_coding	Gse1	exon	ENSMUSG00000031822	ProperStrand	97	chr11	6428121	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.3523
chr3	90017136	90017173	protein_coding	Rps27	exon	ENSMUSG00000090733	ProperStrand	40	chr11	62590601	62590631	snoRNA	ENSMUSG00000064692_SNORA67	.	ENSMUSG00000064692	ProperStrand	185	1	-11.8725
chr8	73174554	73174654	protein_coding	Pgpep1	exon	ENSMUSG00000056204	ProperStrand	12	chr1	162965566	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	4	-19.0784
chr7	52378398	52378457	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	chr9	15119968	15120010	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-2.6825
chr1	120528840	120578776	protein_coding	Tfcp2l1	utr3	ENSMUSG00000026380	ProperStrand	158	chr16	23111374	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	9	-7.5491
chr7	36417995	36418040	protein_coding	Ankrd27	exon	ENSMUSG00000034867	ProperStrand	132	chr5	121655099	121655156	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-4.1558
chr4	131430171	131430219	protein_coding	Srsf4	intron	ENSMUSG00000028911	ProperStrand	101	chr6	39349876	39350409	protein_coding	Mkrn1	exon	ENSMUSG00000029922	ProperStrand	177	1	-10.0971
chr4	41250206	41250223	protein_coding	Dcaf12	intron	ENSMUSG00000028436	ProperStrand	33	chr8	32260372	32260425	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-5.7957
chr10	17667484	17667552	protein_coding	Heca	exon	ENSMUSG00000039879	ProperStrand	13	chr10	23505152	23505214	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.8218
chr10	127800715	127800815	protein_coding	Coq10a	exon	ENSMUSG00000039914	ProperStrand	4	chr10	23505152	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-6.2798
chr9	44630431	44630463	protein_coding	Mll1	exon	ENSMUSG00000002028	ProperStrand	151	chr11	68887040	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-2.4757
chr6	39351268	39351359	protein_coding	Mkrn1	exon	ENSMUSG00000029922	ProperStrand	177	chr19	8963027	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-0.7414
chr5	115699132	115699458	protein_coding	Rnf10	exon	ENSMUSG00000041740	ProperStrand	95	chr2	26768052	26768119	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	1	-7.4767
chr9	55102523	55102539	protein_coding	Nrg4	intron	ENSMUSG00000032311	NonProperStrand	1	chr5	121655100	121655129	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-inf
chr9	27141165	27141265	protein_coding	Igsf9b	exon	ENSMUSG00000034275	ProperStrand	18	chr18	35716830	35716883	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.3552
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr9	45668611	45668627	protein_coding	Bace1	utr3	ENSMUSG00000032086	NonProperStrand	11	1	-12.0538
chr11	106942544	106942579	protein_coding	Bptf	exon	ENSMUSG00000040481	ProperStrand	70	chr18	35716703	35716793	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.9199
chr15	70117627	70117650	SINE	B3A	B2	chr15B3A70117491	NonProperStrand	5	chr10	110918552	110918642	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	5	-inf
chr18	10052129	10052153	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr4	41673405	41673421	protein_coding	Il11ra1	intron	ENSMUSG00000073889	ProperStrand	128	1	-7.2898
chr15	82725590	82725612	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	chr8	126088269	126088303	rRNA	n-R5s115	.	ENSMUSG00000075862	ProperStrand	31	1	-9.8524
chr13	90238585	90238660	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	chr17	35088957	35089015	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	2	-3.0478
chr6	88453761	88453851	protein_coding	Sec61a1	utr3	ENSMUSG00000030082	ProperStrand	46	chr9	15130898	15130978	snoRNA	ENSMUSG00000077394_snoU2_19	.	ENSMUSG00000077394	ProperStrand	96	1	-12.9048
chr10	48338779	48338797	LINE	Lx5	L1	chr10Lx548337987	ProperStrand	6	chr11	62418017	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	2	-16.3851
chr10	30338036	30338053	protein_coding	Hint3	exon	ENSMUSG00000019791	ProperStrand	10	chr4	127033498	127033533	protein_coding	Gjb5	exon	ENSMUSG00000042357	ProperStrand	9	1	-19.9862
chr2	178194847	178194864	protein_coding	Cdh26	exon	ENSMUSG00000039155	NonProperStrand	77	chr7	52382238	52382314	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	3	-17.3070
chr13	31936257	31936280	protein_coding	Gmds	intron	ENSMUSG00000038372	ProperStrand	27	chr11	68886929	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	4	-17.5514
chr13	12524208	12524900	protein_coding	Heatr1	exon	ENSMUSG00000050244	ProperStrand	74	chr19	8800377	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	6	-16.9277
chr15	103073397	103073498	protein_coding	Hnrnpa1	exon	ENSMUSG00000046434	ProperStrand	68	chr18	35716809	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.9662
chr13	56828947	56829891	protein_coding	Smad5	exon	ENSMUSG00000021540	ProperStrand	47	chr6	88455240	88456171	protein_coding	Sec61a1	exon	ENSMUSG00000030082	ProperStrand	46	1	-14.3531
chr3	57450646	57450662	protein_coding	Commd2	exon	ENSMUSG00000036513	ProperStrand	23	chr19	8963157	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.0031
chr7	29136565	29136655	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	chr7	67125760	67125825	snoRNA	ENSMUSG00000089375_Snord107	.	ENSMUSG00000089375	ProperStrand	451	5	-1.6417
chr6	115757990	115758098	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr10	90581115	90581225	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	7	-0.9334
chr9	85965908	85965988	LTR	RMER4A	ERVK	chr9RMER4A85965910	ProperStrand	1	chr9	85965432	85965522	SINE	B3A	B2	chr9B3A85965425	NonProperStrand	1	1	-inf
chr17	75690723	75690739	protein_coding	Ltbp1	exon	ENSMUSG00000001870	ProperStrand	136	chr4	131930888	131930948	protein_coding	Phactr4	intron	ENSMUSG00000066043	ProperStrand	29	1	-13.1431
chr13	64294105	64294140	protein_coding	Cdc14b	utr3	ENSMUSG00000033102	ProperStrand	9	chr16	23110966	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.9939
chr9	37320517	37320536	protein_coding	BC024479	intron	ENSMUSG00000042138	ProperStrand	17	chr16	56035872	56035989	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	1	-11.5036
chr5	76033412	76035024	protein_coding	Kit	exon	ENSMUSG00000005672	ProperStrand	58	chr11	116938577	116938667	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-6.2261
chr2	79132657	79132674	protein_coding-noncoding	Itga4	utr5	ENSMUSG00000027009	NonProperStrand	118	chrX	22938314	22938331	protein_coding	Klhl13	intron	ENSMUSG00000036782	NonProperStrand	3	1	-18.9990
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr2	22444520	22444576	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-3.2281
chr5	23928893	23928910	protein_coding	Cdk5	intron	ENSMUSG00000028969	NonProperStrand	11	chr8	129468749	129468799	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-7.7956
chr2	26493412	26493517	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr5	112730558	112730623	protein_coding	Tpst2	intron	ENSMUSG00000029344	ProperStrand	34	1	-7.3247
chr19	43579408	43579425	protein_coding	Got1	intron	ENSMUSG00000025190	NonProperStrand	147	chr14	33005038	33005091	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-2.3856
chr4	86256493	86256579	protein_coding	Haus6	intron	ENSMUSG00000038047	ProperStrand	21	chr2	145076802	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-9.8419
chr6	92104375	92104391	protein_coding	Nr2c2	exon	ENSMUSG00000005893	ProperStrand	101	chr7	117189852	117189943	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-5.1904
chr2	164717689	164717781	protein_coding	Pcif1	utr3	ENSMUSG00000039849	ProperStrand	22	chr11	62418045	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-7.5551
chr4	116827504	116827600	protein_coding-noncoding	Rps8	utr3	ENSMUSG00000047675	ProperStrand	14	chr5	75473198	75473215	protein_coding	Gsx2	utr3	ENSMUSG00000035946	ProperStrand	307	1	-13.0070
chr10	87908798	87908897	protein_coding	Gnptab	utr3	ENSMUSG00000035311	ProperStrand	65	chr19	8798767	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	7	-19.2842
chr17	85439634	85439714	protein_coding	Slc3a1	intron	ENSMUSG00000024131	NonProperStrand	3	chr17	56493520	56493610	protein_coding	Kdm4b	intron	ENSMUSG00000024201	NonProperStrand	6	1	-inf
chr1	36849486	36849556	protein_coding	Tmem131	utr3	ENSMUSG00000026116	ProperStrand	129	chr4	131865856	131865946	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.7419
chr8	125423628	125423889	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	chr7	134671415	134671495	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-4.2650
chr12	55863963	55864063	protein_coding	Snx6	intron	ENSMUSG00000005656	ProperStrand	9	chr17	35384136	35384195	snoRNA	ENSMUSG00000065273_SNORD83	.	ENSMUSG00000065273	ProperStrand	244	1	-14.3896
chr9	59518282	59518372	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr12	60141330	60141410	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-1.2912
chr7	117189865	117189919	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chrX	120217488	120217504	protein_coding	3110007F17Rik	intron	ENSMUSG00000079450	NonProperStrand	18	1	-8.6272
chr11	115916321	115917349	protein_coding	Unk	exon	ENSMUSG00000020770	ProperStrand	21	chr7	148634701	148634791	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-6.0286
chr13	97425594	97425819	protein_coding	Hmgcr	exon	ENSMUSG00000021670	ProperStrand	56	chr16	23111389	23111479	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.3551
chr8	90434013	90434029	protein_coding	Zfp423	intron	ENSMUSG00000045333	ProperStrand	33	chr11	62416578	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-6.3427
chr7	13516127	13516164	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr6	125113405	125115314	protein_coding	Gapdh	exon	ENSMUSG00000057666	ProperStrand	356	1	-5.1527
chr6	86597205	86597221	protein_coding	Mxd1	utr3	ENSMUSG00000001156	NonProperStrand	40	chr6	122663577	122663641	protein_coding	Nanog	utr3	ENSMUSG00000012396	ProperStrand	66	1	-13.9426
chr10	79756791	79756828	protein_coding	Rps15	exon	ENSMUSG00000063457	ProperStrand	119	chr15	98350183	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	2	-5.9050
chr11	69571941	69572032	protein_coding	Polr2a	utr5	ENSMUSG00000005198	ProperStrand	200	chr10	127525478	127525502	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	5	-19.6139
chr8	73132091	73132191	protein_coding	Ssbp4	utr5	ENSMUSG00000070003	ProperStrand	39	chr2	158182156	158182189	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-5.8451
chr7	29606235	29606281	protein_coding	Hnrnpl	exon	ENSMUSG00000015165	ProperStrand	150	chr12	114375097	114375197	protein_coding	Mta1	utr3	ENSMUSG00000021144	ProperStrand	74	1	-11.0526
chr11	62326583	62326663	protein_coding	Pigl	utr3	ENSMUSG00000014245	ProperStrand	21	chr4	131865377	131865467	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-6.0455
chr11	62417938	62418160	lincRNA	2410006H16Rik	exon	ENSMUSG00000086841	ProperStrand	525	chr15	44779692	44779728	snoRNA	ENSMUSG00000089589_SNORA48	.	ENSMUSG00000089589	ProperStrand	1	1	-inf
chr10	7359842	7359869	protein_coding	Pcmt1	exon	ENSMUSG00000019795	ProperStrand	55	chr5	92844639	92844686	protein_coding	Nup54	utr3	ENSMUSG00000034826	ProperStrand	16	1	-16.1464
chr18	64084502	64084546	protein_coding	Wdr7	exon	ENSMUSG00000040560	ProperStrand	28	chr11	69481333	69481401	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-4.6331
chr7	143781768	143781784	LINE	Lx9	L1	chr7Lx9143781715	ProperStrand	23	chr2	32563527	32563545	protein_coding	Cdk9	exon	ENSMUSG00000009555	NonProperStrand	49	1	-15.6720
chr5	100662735	100662753	pseudogene	Gm8091	.	ENSMUSG00000085915	ProperStrand	5	chr16	23111382	23111442	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-9.8515
chr8	39436369	39436386	protein_coding	Sgcz	intron	ENSMUSG00000039539	ProperStrand	46	chr10	23505227	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.6154
chr8	13416895	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr15	79127420	79136826	protein_coding	Pla2g6	exon	ENSMUSG00000042632	ProperStrand	32	2	-12.3550
chr2	138106109	138106138	protein_coding	Btbd3	exon	ENSMUSG00000062098	ProperStrand	16	chr1	162967491	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-6.0334
chr4	128741800	128741868	protein_coding	Rnf19b	intron	ENSMUSG00000028793	NonProperStrand	3	chr19	8800380	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-16.2874
chr5	108336423	108336495	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	6	-2.4334
chr9	41774559	41774621	protein_coding	Sorl1	utr3	ENSMUSG00000049313	ProperStrand	112	chr2	26494708	26494797	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.0373
chr4	122970509	122975003	protein_coding	Pabpc4	exon	ENSMUSG00000011257	ProperStrand	85	chr4	131908687	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-1.6203
chr4	126252044	126253098	protein_coding	Clspn	exon	ENSMUSG00000042489	ProperStrand	89	chr4	131865431	131865511	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-3.2731
chr2	12941437	12941454	LTR	MTE2a	MaLR	chr2MTE2a12941159	NonProperStrand	42	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-5.8990
chrX	107345077	107345096	LTR	RLTR10-int	ERVK	chrXRLTR10-int107344965	NonProperStrand	1	chr7	29136525	29136578	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-inf
chr18	25362428	25362445	protein_coding	AW554918	exon	ENSMUSG00000033632	ProperStrand	23	chr1	173059710	173059756	protein_coding	Sdhc	utr3	ENSMUSG00000058076	ProperStrand	12	1	-18.3296
chr9	30914368	30914398	protein_coding	St14	exon	ENSMUSG00000031995	ProperStrand	90	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-4.4197
chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	chr14	33005119	33005207	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	2	-1.5852
chr9	58078269	58078359	protein_coding-noncoding	Pml	utr3	ENSMUSG00000036986	ProperStrand	1	chr9	58078311	58078391	protein_coding	Pml	exon	ENSMUSG00000036986	ProperStrand	45	1	-inf
chr12	109913736	109913762	protein_coding	Evl	exon	ENSMUSG00000021262	ProperStrand	9	chr11	69730267	69730367	protein_coding	Eif5a	utr3	ENSMUSG00000078812	ProperStrand	164	1	-15.1767
chr7	109168372	109168449	protein_coding	Rnf121	utr3	ENSMUSG00000070426	ProperStrand	14	chr4	131908804	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-12.6196
chr13	58500495	58500533	protein_coding	Hnrnpk	intron	ENSMUSG00000021546	ProperStrand	117	chr6	37154653	37154722	protein_coding	Dgki	intron	ENSMUSG00000038665	ProperStrand	22	4	-22.3596
chr9	114318533	114318623	protein_coding	Glb1	intron	ENSMUSG00000045594	ProperStrand	67	chr9	43920147	43920227	protein_coding	Rnf26	exon	ENSMUSG00000053128	ProperStrand	30	1	-14.4936
chr13	58345172	58345188	protein_coding	Gkap1	exon	ENSMUSG00000021552	NonProperStrand	4	chr4	131908358	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-11.0940
chr18	67953036	67953061	protein_coding	Seh1l	utr3	ENSMUSG00000079614	ProperStrand	19	chr9	15119723	15119764	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-11.4837
chr9	26440743	26440759	DNA	MER5A	MER1_type	chr9MER5A26440741	ProperStrand	108	chr12	85350481	85350499	protein_coding	Acot1	utr5	ENSMUSG00000072949	ProperStrand	72	1	-11.7661
chr4	131908713	131908813	lincRNA	Gm17300	intron	ENSMUSG00000091021	ProperStrand	109	chr9	120038467	120038518	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	NonProperStrand	28	2	-18.8956
chr15	102035377	102035431	protein_coding	Zfp740	utr5	ENSMUSG00000046897	ProperStrand	34	chr16	23111710	23111763	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-7.4340
chr15	79913286	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr5	125365083	125365337	protein_coding	Zfp664	utr5	ENSMUSG00000079215	ProperStrand	47	1	-4.0488
chr17	25296587	25296604	protein_coding	Clcn7	exon	ENSMUSG00000036636	ProperStrand	94	chr1	162965980	162966035	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-2.7932
chr13	28653437	28700391	lincRNA	2610307P16Rik	exon	ENSMUSG00000085936	ProperStrand	154	chr7	117055435	117055451	protein_coding	Dennd5a	exon	ENSMUSG00000035901	NonProperStrand	1	1	-inf
chr5	23151876	23151893	protein_coding	Srpk2	intron	ENSMUSG00000062604	NonProperStrand	38	chr3	85904465	85904536	snoRNA	ENSMUSG00000065847_SNORA32	.	ENSMUSG00000065847	ProperStrand	40	1	-15.0642
chr14	71065339	71065355	protein_coding	Xpo7	utr3	ENSMUSG00000022100	ProperStrand	109	chr7	4691730	4691754	protein_coding	Suv420h2	utr5	ENSMUSG00000059851	NonProperStrand	70	1	-11.8044
chr1	127331910	127331926	protein_coding	Actr3	utr5	ENSMUSG00000026341	ProperStrand	45	chr5	121655015	121655064	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-7.1766
chr4	46508072	46508111	snoRNA	ENSMUSG00000064410_SNORA36	.	ENSMUSG00000064410	ProperStrand	133	chr7	116663640	116663736	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.2691
chr2	145076805	145209255	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	chr19	46079316	46079332	protein_coding	Hps6	exon	ENSMUSG00000074811	ProperStrand	56	1	-7.8612
chr1	71645947	71651591	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	6	-2.2415
chr10	5992726	5992816	protein_coding	Akap12	exon	ENSMUSG00000038587	ProperStrand	1008	chr2	131005426	131005506	protein_coding	Cenpb	exon	ENSMUSG00000068267	ProperStrand	26	5	-20.2366
chr17	46574854	46574943	protein_coding	Slc22a7	intron	ENSMUSG00000067144	NonProperStrand	5	chr16	23110894	23110960	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr7	29171541	29171558	protein_coding	Med29	utr3	ENSMUSG00000003444	NonProperStrand	134	chr3	32236134	32236223	protein_coding	Zmat3	utr3	ENSMUSG00000027663	ProperStrand	62	1	-11.6345
chr15	81547044	81549175	protein_coding	Rangap1	exon	ENSMUSG00000022391	ProperStrand	69	chr11	97642954	97643034	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.2363
chr11	87240282	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	chr17	23687226	23687256	tRNA	tRNA994-ArgCCG	.	428379	ProperStrand	60	3	-inf
chr5	129256973	129256989	protein_coding	Piwil1	exon	ENSMUSG00000029423	NonProperStrand	1	chr10	127552080	127552129	protein_coding	Baz2a	exon	ENSMUSG00000040054	ProperStrand	274	1	-inf
chr6	142983668	142984756	protein_coding	5730419I09Rik	exon	ENSMUSG00000030279	ProperStrand	81	chr17	35087940	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-4.6209
chr4	116826448	116826504	protein_coding	Rps8	utr3	ENSMUSG00000047675	ProperStrand	262	chr9	15119647	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	4	-3.0938
mmu-miR-292a-5p	3	21	miRNA	mmu-miR-292a-5p	.	mmu-miR-292a-5p	ProperStrand	20	chr12	16994194	16994241	protein_coding	Rock2	utr3	ENSMUSG00000020580	ProperStrand	27	1	-17.0283
chr17	26126614	26126667	protein_coding	Rab11fip3	utr3	ENSMUSG00000037098	ProperStrand	32	chr2	26494762	26494800	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.2767
chr7	134671391	134671504	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	chr6	71832550	71832685	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	8	-11.3419
chr13	54723202	54723218	protein_coding	Faf2	exon	ENSMUSG00000025873	ProperStrand	90	chr2	26768367	26768417	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-4.8145
chr1	63225682	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	chr7	134671405	134671505	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-1.6797
chr5	119188812	119188871	protein_coding	Med13l	exon	ENSMUSG00000018076	ProperStrand	226	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-1.1829
chr3	20238638	20238656	protein_coding	Agtr1b	intron	ENSMUSG00000054988	NonProperStrand	39	chr9	120039623	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-4.1210
chr15	89258921	89259001	protein_coding-noncoding	Chkb	utr3	ENSMUSG00000022617	ProperStrand	4	chr7	29136562	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-7.7378
chr10	82342585	82342603	protein_coding	Txnrd1	exon	ENSMUSG00000020250	ProperStrand	47	chr11	69483190	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.8745
chr5	125509095	125509112	protein_coding	Ncor2	exon	ENSMUSG00000029478	NonProperStrand	20	chr6	126688422	126688438	protein_coding	Kcna6	exon	ENSMUSG00000038077	ProperStrand	3	1	-inf
chr15	81680821	81680881	protein_coding	Tob2	utr3	ENSMUSG00000048546	ProperStrand	7	chr4	131865908	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.7768
chr2	153035360	153035460	protein_coding	Tm9sf4	utr3	ENSMUSG00000068040	ProperStrand	27	chr1	162967489	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	4	-15.7267
chr9	69616998	69617017	lincRNA	B230323A14Rik	intron	ENSMUSG00000087375	NonProperStrand	2	chr2	26494765	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-10.3719
chr5	115308543	115308643	protein_coding	Gm9936	utr5	ENSMUSG00000054123	ProperStrand	1	chr6	125072146	125072184	protein_coding	Chd4	exon	ENSMUSG00000063870	ProperStrand	303	1	-inf
chr7	13870713	13896551	protein_coding	Lig1	exon	ENSMUSG00000056394	ProperStrand	89	chr17	24857717	24857810	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	4	-6.6726
chr5	53998903	53998986	protein_coding	Rbpj	intron	ENSMUSG00000039191	ProperStrand	96	chr19	8798517	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	3	-10.3589
chr9	72582935	72582987	protein_coding	Nedd4	exon	ENSMUSG00000032216	ProperStrand	308	chr2	32818804	32818894	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	6	-14.0125
chr14	122022090	122022158	protein_coding	Dock9	exon	ENSMUSG00000025558	ProperStrand	38	chr19	8798739	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-5.6917
chr6	128289871	128289915	protein_coding	Tulp3	intron	ENSMUSG00000001521	ProperStrand	18	chr13	113973588	113973605	protein_coding	Gzmk	intron	ENSMUSG00000042385	ProperStrand	14	1	-19.1501
chr1	153759644	153759664	protein_coding	1700025G04Rik	intron	ENSMUSG00000032666	NonProperStrand	35	chr11	120148960	120148976	protein_coding	Bahcc1	exon	ENSMUSG00000039741	NonProperStrand	268	1	-11.4011
chr4	120225613	120226562	protein_coding	Ctps	exon	ENSMUSG00000028633	NonProperStrand	24	chr1	162967502	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-8.6266
chr2	129998643	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr1	63225658	63225711	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	7	-14.1424
chr2	77767108	77767176	protein_coding	Cwc22	intron	ENSMUSG00000027014	ProperStrand	17	chr16	23111451	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.3471
chr8	86462469	86462493	protein_coding	Gm10644	intron	ENSMUSG00000074219	ProperStrand	18	chr4	131865855	131865924	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-6.6051
chr2	130801798	130805709	protein_coding	Atrn	exon	ENSMUSG00000027312	ProperStrand	16	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.6705
chr1	59539683	59539700	protein_coding	Fzd7	utr5	ENSMUSG00000041075	ProperStrand	373	chr11	62416951	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	3	-6.8088
chr4	43526330	43526362	protein_coding	Car9	utr3	ENSMUSG00000028463	NonProperStrand	35	chr9	120038554	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	5	-16.7510
chr5	128097560	128097627	protein_coding	Slc15a4	exon	ENSMUSG00000029416	ProperStrand	49	chr18	74938044	74938134	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	ProperStrand	1022	3	-18.0014
chr14	77256115	77256131	DNA	Kanga1a	Tc2	chr14Kanga1a77256001	NonProperStrand	1	chr17	24857713	24857774	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-inf
chr15	81745205	81745305	protein_coding	Aco2	utr3	ENSMUSG00000022477	ProperStrand	237	chr10	126956248	126956452	protein_coding	Shmt2	exon	ENSMUSG00000025403	ProperStrand	94	1	-9.6576
chr11	62155771	62162976	protein_coding	Ncor1	intron	ENSMUSG00000018501	ProperStrand	132	chr7	117189980	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	3	-5.4384
chr4	61934166	61934196	protein_coding	Slc31a2	intron	ENSMUSG00000066152	NonProperStrand	2	chr17	24857815	24857852	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-9.4368
chr5	134652354	134652444	protein_coding	Wbscr16	exon	ENSMUSG00000061979	ProperStrand	13	chr5	149860322	149860385	protein_coding	Hmgb1	exon	ENSMUSG00000066551	ProperStrand	99	1	-15.4249
chr4	108278918	108278934	protein_coding	Orc1	exon	ENSMUSG00000028587	ProperStrand	161	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.6185
chr1	59761694	59761716	snoRNA	ENSMUSG00000089093_Snord11	.	ENSMUSG00000089093	ProperStrand	193	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-3.0109
chr17	26793139	26793159	protein_coding	Ergic1	utr3	ENSMUSG00000001576	ProperStrand	114	chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	1	-7.3130
chr13	46862921	46863011	snoRNA	ENSMUSG00000064558_SNORA55	.	ENSMUSG00000064558	ProperStrand	187	chr9	64024466	64024524	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	1	-6.1113
chr4	86483381	86483418	protein_coding	Dennd4c	exon	ENSMUSG00000038024	ProperStrand	42	chr9	15118325	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-4.1332
chr1	182924625	182924682	protein_coding	Ephx1	intron	ENSMUSG00000038776	ProperStrand	26	chr10	127521215	127521272	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	1	-10.4823
chr18	60872806	60872825	protein_coding	Ndst1	exon	ENSMUSG00000054008	ProperStrand	38	chr11	6520341	6520431	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	1	-8.6333
chr10	122477413	122477486	protein_coding	Mon2	intron	ENSMUSG00000034602	ProperStrand	28	chr19	18788016	18788052	protein_coding	D030056L22Rik	exon	ENSMUSG00000047044	ProperStrand	5	1	-19.5654
mmu-miR-6240	3	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr17	88384155	88384264	protein_coding	Msh6	exon	ENSMUSG00000005370	ProperStrand	150	1	-4.1364
chr1	93252080	93252096	protein_coding	Klhl30	exon	ENSMUSG00000026308	ProperStrand	27	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.1241
chr5	139948292	139948308	protein_coding	Zfand2a	utr3	ENSMUSG00000053581	NonProperStrand	2	chr11	6428108	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-10.4671
chr7	25988604	25988621	protein_coding	Dedd2	exon	ENSMUSG00000054499	NonProperStrand	2	chr2	158182258	158182277	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-12.4042
chr2	156773981	156774091	protein_coding	Ndrg3	exon	ENSMUSG00000027634	ProperStrand	16	chr5	151755616	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	9	-21.6079
chr9	120860095	120860160	protein_coding	Ctnnb1	exon	ENSMUSG00000006932	ProperStrand	214	chr1	17087852	17087868	protein_coding	Jph1	utr5	ENSMUSG00000042686	ProperStrand	39	1	-11.6319
chr3	83726265	83726315	protein_coding	D930015E06Rik	exon	ENSMUSG00000033767	ProperStrand	17	chr12	109460710	109460727	protein_coding	Ccdc85c	intron	ENSMUSG00000084883	ProperStrand	157	1	-13.9498
chr10	59757473	59757723	protein_coding	Psap	exon	ENSMUSG00000004207	ProperStrand	124	chr8	23201841	23201898	protein_coding	Nek5	intron	ENSMUSG00000037738	ProperStrand	3	1	-18.4586
chr11	30008134	30008150	protein_coding	Spnb2	utr3	ENSMUSG00000020315	NonProperStrand	3	chr16	23110861	23110882	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr10	58629134	58629214	protein_coding	Sept10	intron	ENSMUSG00000019917	ProperStrand	34	chr3	123210884	123210974	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.0438
chr2	165203163	165203180	protein_coding	Zfp334	utr3	ENSMUSG00000017667	NonProperStrand	33	chrX	34623019	34623037	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-4.2854
chr16	4886395	4886411	protein_coding	Mgrn1	exon	ENSMUSG00000022517	NonProperStrand	157	chr2	32818884	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-3.6378
chrX	7250920	7250938	protein_coding-noncoding	Magix	utr3	ENSMUSG00000031147	NonProperStrand	5	chr16	23110455	23110517	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-7.3464
chr6	70794801	70794819	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chr11	97642952	97643052	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	7	-10.1141
chr12	60172526	60172542	protein_coding	Pnn	exon	ENSMUSG00000020994	ProperStrand	42	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.9369
chr2	90235315	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr16	87419153	87419300	snoRNA	ENSMUSG00000065647_SNORA2	.	ENSMUSG00000065647	ProperStrand	123	3	-7.9101
chr8	108751071	108751110	protein_coding	Prmt7	intron	ENSMUSG00000060098	ProperStrand	43	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-7.2540
chrX	140791401	140791491	protein_coding-noncoding	Alg13	utr3	ENSMUSG00000041718	ProperStrand	87	chr9	120860027	120860098	protein_coding	Ctnnb1	exon	ENSMUSG00000006932	ProperStrand	214	1	-10.0166
chr7	149170855	149171340	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	chr16	23110504	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-0.9292
chr11	83755782	83755799	protein_coding	Ddx52	intron	ENSMUSG00000020677	NonProperStrand	5	chr4	131908357	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-10.1894
chr2	144087323	144087463	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	chr8	73419649	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	17	-4.3894
chr11	117674757	117674873	protein_coding	Syngr2	utr3	ENSMUSG00000048277	ProperStrand	15	chr10	80641724	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	1	-10.3564
chr16	91659256	91659356	protein_coding	Son	exon	ENSMUSG00000022961	ProperStrand	59	chr8	46037578	46037597	protein_coding	Fat1	exon	ENSMUSG00000070047	ProperStrand	306	1	-10.0820
chr10	23505149	23505282	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	chr2	166890780	166890837	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	11	-5.9010
chr9	15130900	15130990	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	chr12	112779243	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-1.2501
chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	chr10	10876946	10877018	protein_coding	Shprh	exon	ENSMUSG00000090112	ProperStrand	52	1	-9.0502
chr14	57312831	57312858	protein_coding	Mphosph8	intron	ENSMUSG00000079184	NonProperStrand	27	chr9	15119649	15119740	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-10.0204
chr4	55363179	55363279	protein_coding	Rad23b	utr5	ENSMUSG00000028426	ProperStrand	86	chr11	77994801	77994863	snoRNA	ENSMUSG00000064540_Snord42a	.	ENSMUSG00000064540	ProperStrand	142	1	-10.8605
chr5	38622054	38622080	protein_coding	Lyar	exon	ENSMUSG00000067367	ProperStrand	33	chr4	131908688	131908794	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-3.8484
chr15	79358621	79358721	protein_coding	Ddx17	utr3	ENSMUSG00000055065	ProperStrand	140	chr17	24665424	24665499	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-3.3462
chr3	53282877	53282967	protein_coding	2810046L04Rik	utr3	ENSMUSG00000049504	ProperStrand	15	chr9	120038576	120038656	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.6922
chr2	159312313	159312393	SINE	B1_Mur2	Alu	chr2B1_Mur2159312305	NonProperStrand	1	chr2	159311943	159312033	SINE	B3	B2	chr2B3159311875	ProperStrand	1	1	-inf
chr12	114047889	114047956	protein_coding	BC022687	exon	ENSMUSG00000037594	ProperStrand	2	chr1	162966189	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-15.0517
chr15	101754849	101754865	protein_coding	Krt4	exon	ENSMUSG00000059668	ProperStrand	45	chr4	116828390	116828428	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-8.9597
chr5	31361462	31374734	protein_coding	Cad	exon	ENSMUSG00000013629	ProperStrand	260	chr10	23505150	23505278	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-1.1321
chr14	31790263	31790279	protein_coding	Nek4	intron	ENSMUSG00000021918	NonProperStrand	4	chr1	162966189	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-13.2442
chr1	155316048	155316064	protein_coding	Dhx9	exon	ENSMUSG00000042699	ProperStrand	98	chr1	162965531	162965592	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.4133
chr12	70269862	70269878	protein_coding	Lrr1	exon	ENSMUSG00000034883	ProperStrand	26	chr7	29136556	29136646	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.8707
chr2	90235287	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	45198928	45199653	protein_coding	Fxyd6	exon	ENSMUSG00000066705	NonProperStrand	108	2	-5.7410
chr7	131242938	131242957	protein_coding	Hs3st4	intron	ENSMUSG00000078591	NonProperStrand	10	chr9	15119631	15119758	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-6.0614
chr5	65952377	65952395	protein_coding	Ube2k	intron	ENSMUSG00000029203	ProperStrand	289	chr7	117189912	117190012	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-1.7566
chr16	16346235	16358911	protein_coding	Dnm1l	exon	ENSMUSG00000022789	ProperStrand	29	chr9	64022886	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	2	-15.0306
chr17	47881185	47881275	protein_coding	Tfeb	intron	ENSMUSG00000023990	ProperStrand	78	chr1	92997158	92997795	protein_coding	Lrrfip1	exon	ENSMUSG00000026305	ProperStrand	26	1	-14.4698
chr13	14703716	14703763	protein_coding	Mrpl32	exon	ENSMUSG00000015672	ProperStrand	7	chr7	117189933	117190023	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-7.5942
chr18	32405206	32405222	protein_coding	Ercc3	exon	ENSMUSG00000024382	ProperStrand	280	chr9	64022856	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-4.9944
chr19	24171119	24171135	protein_coding	Tjp2	exon	ENSMUSG00000024812	NonProperStrand	3	chr7	16524120	16524219	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	NonProperStrand	1	1	-inf
chr12	82286981	82287011	protein_coding	Smoc1	utr3	ENSMUSG00000021136	ProperStrand	7	chr1	162965547	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-7.5326
chr10	30320342	30320359	protein_coding	Trmt11	intron	ENSMUSG00000019792	NonProperStrand	26	chr16	23110839	23110871	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.2392
chr7	19737846	19737933	protein_coding	Snrpd2	exon	ENSMUSG00000040824	ProperStrand	23	chr7	95266597	95266613	protein_coding	Grm5	intron	ENSMUSG00000049583	NonProperStrand	145	1	-13.4830
chr5	73189869	73189885	protein_coding	Tec	intron	ENSMUSG00000029217	NonProperStrand	23	chr18	35716684	35716745	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.8840
chr18	6240801	6240818	protein_coding	Kif5b	intron	ENSMUSG00000006740	ProperStrand	65	chr16	91729698	91729723	protein_coding	Itsn1	utr5	ENSMUSG00000022957	ProperStrand	172	1	-11.0392
chr13	24824232	24824248	protein_coding	Fam65b	utr3	ENSMUSG00000036006	ProperStrand	51	chr10	90432659	90432678	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	1	-10.9460
chr17	39985129	39985152	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr7	52378417	52378481	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	1	-1.5943
chr2	150652967	150654198	protein_coding	Pygb	exon	ENSMUSG00000033059	ProperStrand	6	chr10	23505151	23505196	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-5.3874
chr9	58547119	58547136	protein_coding	2410076I21Rik	intron	ENSMUSG00000074269	ProperStrand	91	chr2	26493364	26493477	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-2.9834
chr1	187146707	187146771	protein_coding	Iars2	exon	ENSMUSG00000026618	ProperStrand	68	chr3	123210876	123210933	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-5.2252
chr5	140234463	140235099	protein_coding	Ints1	exon	ENSMUSG00000029547	ProperStrand	45	chrX	71517865	71517945	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	2	-11.4526
chr13	98264549	98264593	lincRNA	Gm11019	exon	ENSMUSG00000078952	ProperStrand	113	chr5	135858340	135858949	protein_coding	Pom121	exon	ENSMUSG00000053293	ProperStrand	127	1	-10.5366
chr2	48204305	48204323	lincRNA	Gm13481	intron	ENSMUSG00000086353	NonProperStrand	36	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-9.6209
chr1	82679326	82679342	protein_coding	Col4a3	exon	ENSMUSG00000079465	ProperStrand	99	chr9	15118322	15118343	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-2.5742
chr9	42948064	42948082	protein_coding	Pou2f3	exon	ENSMUSG00000032015	ProperStrand	12	chr7	52382275	52382314	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-11.5601
chr5	136451719	136451736	SINE	B3A	B2	chr5B3A136451702	NonProperStrand	23	chr1	162968443	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-7.9958
chr14	37690886	37690976	protein_coding	Gcap14	utr3	ENSMUSG00000058690	ProperStrand	10	chr19	8800361	8800441	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-7.0560
chr8	126066106	126066195	rRNA	n-R5s102	.	ENSMUSG00000075740	ProperStrand	2	chr8	32260343	32260425	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	2	-inf
chr4	154344284	154344569	protein_coding	Pank4	exon	ENSMUSG00000029056	ProperStrand	15	chr15	79908972	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-8.2499
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr17	35088957	35089021	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	3	-2.0635
chr8	31864785	31864803	LTR	MTC	MaLR	chr8MTC31864656	NonProperStrand	1	chr16	23110899	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr7	56556420	56556436	protein_coding	Nav2	intron	ENSMUSG00000052512	ProperStrand	106	1	-10.2273
chr11	115184093	115184173	protein_coding-noncoding	Otop2	utr5	ENSMUSG00000050201	NonProperStrand	1	chr11	115183969	115184059	protein_coding	Otop2	intron	ENSMUSG00000050201	NonProperStrand	1	1	-inf
chr10	127152705	127152721	protein_coding	Myo1a	exon	ENSMUSG00000025401	ProperStrand	93	chr1	162967489	162967535	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-2.6896
chr13	49218439	49218455	protein_coding	Wnk2	intron	ENSMUSG00000037989	NonProperStrand	67	chr9	40113929	40113961	protein_coding	Gramd1b	exon	ENSMUSG00000040111	ProperStrand	40	1	-13.9093
chr1	75484537	75484553	protein_coding	Obsl1	exon	ENSMUSG00000026211	NonProperStrand	192	chr9	102923932	102923950	protein_coding	Slco2a1	intron	ENSMUSG00000032548	ProperStrand	3	1	-17.4138
chr3	90198015	90198031	protein_coding	Ints3	exon	ENSMUSG00000027933	NonProperStrand	7	chrX	34622930	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	4	-inf
chr7	124649441	124649460	protein_coding	Xylt1	intron	ENSMUSG00000030657	NonProperStrand	8	chr2	181405343	181405359	protein_coding	Sox18	exon	ENSMUSG00000046470	ProperStrand	96	1	-16.4090
chr13	73605025	73605044	protein_coding	Lpcat1	intron	ENSMUSG00000021608	NonProperStrand	2	chr16	23110965	23110993	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr2	156350958	156350975	protein_coding	Epb4.1l1	utr5	ENSMUSG00000027624	ProperStrand	27	chr18	75161108	75161171	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	1	-10.6337
chr13	23647331	23647421	protein_coding	Hist1h1d	exon	ENSMUSG00000052565	ProperStrand	78	chr10	23505173	23505253	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-0.8973
chr2	105233877	105234863	protein_coding	Rcn1	exon	ENSMUSG00000005973	ProperStrand	24	chr9	15119736	15119767	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.3157
chr11	109258523	109258539	protein_coding	Gna13	utr3	ENSMUSG00000020611	NonProperStrand	1	chr17	24665420	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-inf
chr8	26783960	26784021	protein_coding-noncoding	Whsc1l1	utr5	ENSMUSG00000054823	ProperStrand	3	chr2	129033423	129033523	protein_coding	Slc20a1	exon	ENSMUSG00000027397	ProperStrand	81	2	-22.8684
chr9	56994434	56994495	protein_coding	Neil1	exon	ENSMUSG00000032298	ProperStrand	7	chr18	35716829	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-15.0288
chr9	61761313	61761769	protein_coding	Rplp1	exon	ENSMUSG00000007892	ProperStrand	116	chr16	23111718	23111798	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-3.1220
chr10	7482609	7482626	protein_coding	Katna1	utr3	ENSMUSG00000019794	ProperStrand	14	chr11	62416582	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-8.0774
chr3	113827103	113827119	protein_coding	Col11a1	utr3	ENSMUSG00000027966	NonProperStrand	139	chr17	24857716	24857775	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.0424
chr9	103247214	103247269	protein_coding	Topbp1	exon	ENSMUSG00000032555	ProperStrand	81	chr16	23111694	23111784	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-6.0394
chr10	60565976	60566054	protein_coding	Sgpl1	exon	ENSMUSG00000020097	ProperStrand	34	chr14	33005040	33005091	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	3	-12.0177
chr1	63225626	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	chr2	91436228	91436260	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	3	-4.1336
chr15	38756261	38756281	lincRNA	Gm17265	intron	ENSMUSG00000091397	ProperStrand	3	chr15	76427878	76427925	protein_coding	Cpsf1	exon	ENSMUSG00000034022	ProperStrand	127	1	-18.9391
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr19	8800357	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	11	-11.7424
chr1	162968212	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	chr11	77996557	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	3	-2.2212
chrX	162877997	162878021	protein_coding	Ofd1	exon	ENSMUSG00000040586	ProperStrand	8	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-11.8556
chr15	82122149	82122174	protein_coding	Sept3	utr3	ENSMUSG00000022456	ProperStrand	8	chr13	70776149	70776165	protein_coding	BC018507	intron	ENSMUSG00000034525	NonProperStrand	7	1	-19.5782
chr2	152221194	152221274	protein_coding	Sox12	utr3	ENSMUSG00000051817	ProperStrand	31	chr5	121655062	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.0092
chr4	132849333	132849363	protein_coding	Wdtc1	utr3	ENSMUSG00000037622	ProperStrand	81	chr6	115757999	115758087	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-4.8894
chr8	28930467	28930530	SINE	B2_Mm2	B2	chr8B2_Mm228930395	ProperStrand	4	chr17	46861595	46861611	protein_coding	Pex6	exon	ENSMUSG00000002763	ProperStrand	292	1	-15.7941
chrX	12296767	12296783	protein_coding	Med14	exon	ENSMUSG00000064127	ProperStrand	4	chr11	101466251	101466341	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	1	-14.5446
chr3	88117227	88117498	protein_coding	Cct3	exon	ENSMUSG00000001416	ProperStrand	82	chr11	69481373	69481453	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-2.6469
chr2	103294798	103294888	protein_coding	Cat	utr3	ENSMUSG00000027187	ProperStrand	10	chr9	120038478	120038558	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-6.5201
chr1	51071916	51071936	protein_coding	Tmeff2	intron	ENSMUSG00000026109	ProperStrand	1	chr11	69483212	69483282	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-inf
chrX	7450865	7451052	protein_coding	Otud5	exon	ENSMUSG00000031154	ProperStrand	79	chr19	5046674	5046718	protein_coding	Brms1	exon	ENSMUSG00000080268	ProperStrand	3	1	-21.1366
mmu-miR-6239	1	18	miRNA	mmu-miR-6239	.	mmu-miR-6239	ProperStrand	31	chr13	98015898	98016007	protein_coding	Enc1	exon	ENSMUSG00000041773	ProperStrand	24	1	-16.5039
chrX	103395874	103395939	protein_coding	Pgk1	intron	ENSMUSG00000062070	ProperStrand	484	chr18	74938041	74938105	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	ProperStrand	1022	1	-3.6044
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr17	34324656	34324673	protein_coding	Psmb9	utr5	ENSMUSG00000024337	ProperStrand	60	1	-8.7158
chr2	24205199	24205215	protein_coding	Il1rn	utr3	ENSMUSG00000026981	ProperStrand	45	chr16	23111447	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.6772
chr9	103083100	103083180	protein_coding	Rab6b	intron	ENSMUSG00000032549	ProperStrand	4	chr9	64852998	64853088	protein_coding	Ptplad1	intron	ENSMUSG00000033629	ProperStrand	13	1	-19.7889
chr14	57489234	57489324	LTR	ETnERV2-int	ERVK	chr14ETnERV2-int57487994	NonProperStrand	1	chr14	57489396	57489476	LTR	RLTR13D2	ERVK	chr14RLTR13D257489360	NonProperStrand	1	1	-inf
chr1	36231010	36231785	protein_coding	Uggt1	exon	ENSMUSG00000037470	ProperStrand	67	chr4	131826045	131826127	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	1	-8.9963
chr1	39605599	39605679	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	chr7	29136552	29136642	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	NonProperStrand	27	1	-8.9483
chr15	102495512	102495612	protein_coding	Atp5g2	exon	ENSMUSG00000062683	ProperStrand	32	chr11	77995191	77995220	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-7.4344
chr8	47617228	47618752	protein_coding	Acsl1	exon	ENSMUSG00000018796	ProperStrand	23	chr16	23110828	23110875	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.4133
chr13	59901339	59901439	protein_coding	Zcchc6	exon	ENSMUSG00000035248	ProperStrand	23	chr16	23111777	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.5778
chr12	8349549	8349565	protein_coding	Hs1bp3	utr3	ENSMUSG00000020605	ProperStrand	35	chr6	114811474	114811564	protein_coding	Vgll4	utr3	ENSMUSG00000030315	NonProperStrand	5	2	-19.5429
chr11	21764659	21764678	protein_coding	Wdpcp	intron	ENSMUSG00000020319	NonProperStrand	6	chr9	120038466	120038493	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-7.6033
chr6	24684480	24684497	protein_coding	Hyal6	exon	ENSMUSG00000029679	NonProperStrand	114	chr2	156536880	156536967	protein_coding	Dlgap4	exon	ENSMUSG00000061689	ProperStrand	80	5	-19.2416
chr7	30231512	30231592	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	chr2	26493389	26493479	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-0.9701
chr8	108469036	108469053	protein_coding	Slc12a4	exon	ENSMUSG00000017765	ProperStrand	25	chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	1	-10.6080
chr10	95464167	95464198	protein_coding	Eea1	intron	ENSMUSG00000036499	ProperStrand	82	chr1	182829063	182829109	protein_coding	Lefty2	utr3	ENSMUSG00000066652	ProperStrand	48	1	-13.1367
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chrX	159351220	159359135	protein_coding	Ctps2	exon	ENSMUSG00000031360	ProperStrand	11	1	-11.4311
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr4	108012493	108012593	protein_coding	2010305A19Rik	utr3	ENSMUSG00000048351	ProperStrand	8	1	-10.4808
chr17	34069111	34069127	protein_coding	Rgl2	exon	ENSMUSG00000041354	NonProperStrand	5	chr11	78150285	78150301	protein_coding	Pigs	exon	ENSMUSG00000041958	NonProperStrand	138	1	-16.8317
chr6	149466145	149466161	protein_coding	Bicd1	intron	ENSMUSG00000003452	NonProperStrand	6	chr11	69483136	69483187	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-6.9324
chr5	68513392	68513410	protein_coding	Grxcr1	intron	ENSMUSG00000068082	NonProperStrand	7	chr4	131865940	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-9.6520
chr16	56050884	56050900	LTR	MuRRS-int	ERV1	chr16MuRRS-int56048649	ProperStrand	1	chr5	112865460	112865478	protein_coding	Sez6l	exon	ENSMUSG00000058153	ProperStrand	81	1	-inf
chr18	10052128	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr10	93342357	93349742	protein_coding	Metap2	exon	ENSMUSG00000036112	ProperStrand	78	1	-8.2758
chr11	65502788	65502867	protein_coding	Map2k4	utr3	ENSMUSG00000033352	ProperStrand	10	chr16	23110959	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.7978
chr11	42440243	42440259	protein_coding	Gabrb2	exon	ENSMUSG00000007653	ProperStrand	248	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	2	-6.4810
chr2	8265715	8265795	LINE	L1_Mus1	L1	chr2L1_Mus18265626	NonProperStrand	1	chr2	8265479	8265569	LTR	MTEa	MaLR	chr2MTEa8265474	NonProperStrand	1	1	-inf
chr11	57874141	57874231	protein_coding	Larp1	utr3	ENSMUSG00000037331	ProperStrand	201	chr5	108334198	108334278	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-2.5947
chr7	35023072	35023172	protein_coding	4931406P16Rik	utr3	ENSMUSG00000066571	ProperStrand	75	chr17	13115734	13115786	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	9	-19.6342
chr4	79648822	79648889	pseudogene	Gm11407	.	ENSMUSG00000082179	ProperStrand	26	chr2	26494759	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.6773
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr6	88468561	88468620	protein_coding-noncoding	Sec61a1	utr3	ENSMUSG00000030082	ProperStrand	1	1	-inf
chr4	43505664	43505754	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr5	125504537	125504601	protein_coding	Ncor2	exon	ENSMUSG00000029478	ProperStrand	377	4	-2.7040
chr4	131865382	131865515	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	chr2	32818807	32818942	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	10	-0.7014
chr15	85889272	85889291	protein_coding	Gramd4	utr5	ENSMUSG00000035900	ProperStrand	39	chr16	23111389	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.9006
chr7	52560178	52565905	protein_coding	Trpm4	exon	ENSMUSG00000038260	ProperStrand	161	chr17	24857715	24857853	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-1.7427
chr18	63908609	63908625	protein_coding	Wdr7	intron	ENSMUSG00000040560	NonProperStrand	180	chr18	73693113	73693133	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-3.4374
chr1	74484986	74485076	protein_coding	Usp37	utr3	ENSMUSG00000033364	ProperStrand	47	chr4	4692072	4692137	protein_coding	Impad1	utr3	ENSMUSG00000066324	ProperStrand	23	1	-15.7386
chr2	90235294	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	119131741	119131759	protein_coding	Gaa	exon	ENSMUSG00000025579	ProperStrand	149	1	-2.7892
chr9	54768317	54768333	protein_coding	Agphd1	exon	ENSMUSG00000035878	NonProperStrand	19	chr12	56666634	56666651	protein_coding	Aldoart2	exon	ENSMUSG00000063129	ProperStrand	2	1	-inf
chr11	108783076	108783093	protein_coding	Axin2	utr5	ENSMUSG00000000142	NonProperStrand	81	chrX	84483699	84483720	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-7.6498
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr1	180267103	180267156	protein_coding	Hnrnpu	exon	ENSMUSG00000039630	ProperStrand	286	1	-3.9979
chr1	89702084	89702100	protein_coding	Sag	intron	ENSMUSG00000056055	ProperStrand	5	chr2	26494802	26494845	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-8.0805
chr12	11261975	11262008	protein_coding	Gen1	exon	ENSMUSG00000051235	ProperStrand	12	chr7	116663681	116663767	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	7	-inf
chr15	8008306	8008323	protein_coding	Wdr70	intron	ENSMUSG00000039828	NonProperStrand	7	chr16	90386835	90386853	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	1	-16.7194
chr2	152656290	152656306	protein_coding	Bcl2l1	utr5	ENSMUSG00000007659	NonProperStrand	29	chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-7.9068
chr14	103690285	103690507	protein_coding	Mycbp2	exon	ENSMUSG00000033004	ProperStrand	129	chr1	89673594	89673674	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-1.9500
chr17	38290745	38290764	LTR	MurERV4-int	ERVK	chr17MurERV4-int38290059	ProperStrand	21	chr9	57938243	57938272	protein_coding	Stra6	intron	ENSMUSG00000032327	ProperStrand	1	1	-inf
chr14	28272978	28272994	protein_coding	D14Abb1e	exon	ENSMUSG00000040651	ProperStrand	49	chr5	111121151	111121200	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-6.8362
chr11	118900007	118900024	protein_coding	Cbx8	exon	ENSMUSG00000025578	ProperStrand	95	chr7	116664794	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.7944
chr2	164333309	164333344	protein_coding	Pigt	utr3	ENSMUSG00000017721	ProperStrand	45	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.8074
chr9	21934462	21934478	protein_coding	Acp5	exon	ENSMUSG00000001348	ProperStrand	66	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-8.4022
chr10	75359822	75360194	protein_coding	Smarcb1	exon	ENSMUSG00000000902	ProperStrand	109	chr15	75894917	75894958	protein_coding	Scrib	exon	ENSMUSG00000022568	ProperStrand	154	1	-10.2227
chr13	25082534	25082592	protein_coding	Gpld1	utr3	ENSMUSG00000021340	NonProperStrand	1	chr17	13112455	13112545	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-inf
chr7	36388906	36389233	protein_coding	Ankrd27	exon	ENSMUSG00000034867	ProperStrand	132	chr9	65542429	65542468	protein_coding	Zfp609	utr3	ENSMUSG00000040524	ProperStrand	87	1	-10.9833
chrX	130896631	130896926	protein_coding	Cenpi	utr3	ENSMUSG00000031262	ProperStrand	12	chr16	23111374	23111481	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-6.8529
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr15	76220552	76222821	protein_coding	Heatr7a	utr5	ENSMUSG00000022558	ProperStrand	48	1	-6.3440
chr3	129330457	129330540	protein_coding	Elovl6	intron	ENSMUSG00000041220	ProperStrand	59	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-8.1926
chr7	134927593	134928368	protein_coding	Setd1a	exon	ENSMUSG00000042308	ProperStrand	58	chr4	131908689	131908719	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.2702
chr9	78023108	78023164	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr9	59523519	59525888	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	1	-0.6969
chr3	159502831	159502850	protein_coding	Wls	utr5	ENSMUSG00000028173	NonProperStrand	35	chr10	39978373	39978473	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	2	-10.5671
chr1	157912219	157912562	protein_coding	Tor1aip2	exon	ENSMUSG00000050565	ProperStrand	31	chr16	23110925	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-3.2978
chr4	55024016	55024055	protein_coding	Zfp462	exon	ENSMUSG00000060206	ProperStrand	37	chr7	116664804	116664873	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.4116
chr5	117559799	117559818	protein_coding	Suds3	exon	ENSMUSG00000066900	NonProperStrand	8	chr1	162965981	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-7.6037
chr15	84145664	84145714	protein_coding	Parvb	utr3	ENSMUSG00000022438	ProperStrand	127	chr1	162967540	162967566	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-3.8697
chr2	129998650	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr19	46433576	46433635	snoRNA	ENSMUSG00000065204_SNORA32	.	ENSMUSG00000065204	ProperStrand	20	1	-10.3301
chr10	127574747	127574763	protein_coding	Rbms2	exon	ENSMUSG00000040043	NonProperStrand	7	chr16	23110874	23110939	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.4785
chr12	88488443	88496424	protein_coding	Pomt2	exon	ENSMUSG00000034126	NonProperStrand	331	chr11	62416601	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-2.0629
chr8	3803251	3803331	misc_RNA	RNaseP_nuc	.	ENSMUSG00000088025	ProperStrand	328	chr9	120039588	120039678	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-0.7221
chr10	31328217	31328236	protein_coding	Rnf217	exon	ENSMUSG00000063760	ProperStrand	33	chr7	117190275	117190306	protein_coding	Ipo7	exon	ENSMUSG00000066232	ProperStrand	2121	1	-7.3994
chr1	37204963	37204981	LTR	RLTR11A	ERVK	chr1RLTR11A37204762	ProperStrand	1	chr10	23506322	23506348	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-inf
chr18	16933117	16966848	protein_coding	Cdh2	exon	ENSMUSG00000024304	ProperStrand	71	chr6	83299497	83301286	protein_coding	Bola3	exon	ENSMUSG00000045160	ProperStrand	3	1	-19.6105
chr10	82456766	82456784	protein_coding	Chst11	intron	ENSMUSG00000034612	ProperStrand	170	chr17	24856620	24856753	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-4.4041
chr6	122680102	122680133	protein_coding	Slc2a3	exon	ENSMUSG00000003153	ProperStrand	682	chr11	19964185	19964295	protein_coding	Actr2	utr3	ENSMUSG00000020152	ProperStrand	72	12	-19.9253
chr9	123082946	123082962	protein_coding	Cdcp1	exon	ENSMUSG00000035498	ProperStrand	2	chr2	166890501	166890556	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-15.0209
chr9	37036938	37036954	protein_coding	Slc37a2	utr3	ENSMUSG00000032122	NonProperStrand	13	chr16	43886850	43886929	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	1	-11.1839
chr4	126547539	126547629	protein_coding-noncoding	Zmym4	utr3	ENSMUSG00000042446	ProperStrand	5	chr16	23111450	23111494	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	5	-inf
chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	chr1	162967734	162967787	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	1	-5.5673
chr2	126568179	126568279	protein_coding	Usp8	exon	ENSMUSG00000027363	ProperStrand	40	chr4	131908236	131908286	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.0419
chr6	39349054	39349112	protein_coding	Mkrn1	utr3	ENSMUSG00000029922	ProperStrand	177	chr11	97631139	97631177	tRNA	tRNA1444-CysGCA	.	335633	ProperStrand	91	3	-inf
chr10	68805416	68805440	protein_coding	Cdk1	exon	ENSMUSG00000019942	ProperStrand	42	chr18	33954899	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-4.1732
chr3	138122475	138122506	protein_coding	Metap1	utr3	ENSMUSG00000005813	ProperStrand	9	chr15	5068442	5068480	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	2	-15.8187
chr6	124654538	124654555	protein_coding	Emg1	utr3	ENSMUSG00000004268	ProperStrand	12	chr10	23505152	23505241	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-6.7989
chr19	42225881	42225897	protein_coding	Marveld1	utr3	ENSMUSG00000044345	NonProperStrand	112	chr9	120038552	120038607	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.9763
chr12	17552949	17553030	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr18	75161534	75161598	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	4	-2.2458
chr8	81873568	81873645	protein_coding	Smad1	exon	ENSMUSG00000031681	ProperStrand	45	chr14	31827478	31827532	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-7.5183
chr2	26451868	26451884	protein_coding	Gm20532	intron	ENSMUSG00000092356	ProperStrand	46	chr1	89673511	89673538	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-3.7530
chr13	23790229	23790309	protein_coding	Hist1h4c	exon	ENSMUSG00000060678	ProperStrand	19	chr16	23110872	23110962	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7016
mmu-miR-1949	0	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	NonProperStrand	1	chr18	35714144	35714260	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	NonProperStrand	47	1	-inf
chr5	112643452	112643487	lincRNA	Miat	exon	ENSMUSG00000086878	ProperStrand	2	chr11	29147227	29147245	protein_coding	Ccdc104	utr5	ENSMUSG00000020462	ProperStrand	20	1	-22.5839
chr13	64253513	64253593	protein_coding	Zfp367	intron	ENSMUSG00000044934	ProperStrand	34	chr3	68889050	68889143	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	26	-19.0579
chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	chr7	86283052	86283105	protein_coding	Mfge8	intron	ENSMUSG00000030605	ProperStrand	73	1	-9.6807
chr2	90235286	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	30026273	30026289	protein_coding	Yif1b	intron	ENSMUSG00000030588	ProperStrand	154	1	-2.7317
chr1	84779427	84779445	protein_coding	Trip12	exon	ENSMUSG00000026219	ProperStrand	248	chr1	141319671	141319687	protein_coding	Zbtb41	utr5	ENSMUSG00000033964	NonProperStrand	145	1	-8.7007
chr4	41688085	41688161	protein_coding	Sigmar1	utr5	ENSMUSG00000036078	ProperStrand	11	chr12	17552999	17553089	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-8.4977
chr8	37642301	37642349	protein_coding	Dlc1	exon	ENSMUSG00000031523	ProperStrand	89	chr18	59490475	59490492	protein_coding	Chsy3	intron	ENSMUSG00000058152	ProperStrand	35	1	-13.6117
chr8	80082843	80082882	protein_coding	Prmt10	exon	ENSMUSG00000037134	ProperStrand	14	chr4	131908237	131908295	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.9265
chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	chr2	26066902	26066951	protein_coding	Qsox2	exon	ENSMUSG00000036327	ProperStrand	24	1	-10.3544
chr12	77450634	77450675	protein_coding	Zbtb25	exon	ENSMUSG00000056459	ProperStrand	3	chr7	116663713	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-8.5982
chr7	134894433	134894533	protein_coding	Fbxl19	exon	ENSMUSG00000030811	ProperStrand	15	chr7	29136584	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.9384
chr4	41250206	41250223	protein_coding	Dcaf12	intron	ENSMUSG00000028436	ProperStrand	33	chr5	108336363	108336422	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-6.0520
chr1	166278000	166310803	protein_coding	Nme7	exon	ENSMUSG00000026575	ProperStrand	3	chr5	23877780	23877947	protein_coding	Nos3	exon	ENSMUSG00000028978	ProperStrand	13	1	-inf
chr19	6314706	6314777	protein_coding	Cdc42bpg	exon	ENSMUSG00000024769	ProperStrand	90	chr7	117166795	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-4.0435
chr1	46880011	46880037	protein_coding	Slc39a10	intron	ENSMUSG00000025986	ProperStrand	95	chr18	35716839	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.4556
chr4	106246441	106246541	protein_coding	Dhcr24	exon	ENSMUSG00000034926	ProperStrand	94	chr5	130295493	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-4.3844
chr4	45330664	45332426	protein_coding	Exosc3	exon	ENSMUSG00000028322	ProperStrand	8	chr11	62416598	62416640	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-14.8395
chr6	4705887	4705948	protein_coding	Peg10	exon	ENSMUSG00000092035	ProperStrand	102	chr9	15119668	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.7571
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr11	55296262	55296333	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	4	-4.2782
chr3	108228259	108228275	protein_coding	Sars	utr3	ENSMUSG00000068739	NonProperStrand	200	chr9	15118283	15118320	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-1.4536
chr9	78326855	78326928	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chrX	139116321	139116339	protein_coding	Tmem164	utr5	ENSMUSG00000047045	ProperStrand	13	2	-15.0061
chr6	146887450	146887480	protein_coding	Ppfibp1	utr5	ENSMUSG00000016487	ProperStrand	11	chr10	110918629	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-11.0474
chr16	30514154	30514171	protein_coding	Tmem44	utr3	ENSMUSG00000022537	ProperStrand	217	chr8	72433764	72433788	protein_coding	Gatad2a	exon	ENSMUSG00000036180	ProperStrand	112	1	-9.4829
chr6	124791245	124791261	protein_coding	Leprel2	utr3	ENSMUSG00000023191	ProperStrand	44	chr6	146558372	146558396	protein_coding	Tm7sf3	exon	ENSMUSG00000040234	ProperStrand	43	1	-14.6277
chr12	60407634	60407651	LINE	L1_Rod	L1	chr12L1_Rod60407508	ProperStrand	2	chr11	115447404	115447504	protein_coding	Gga3	exon	ENSMUSG00000020740	ProperStrand	44	1	-inf
chr4	11109364	11109386	LTR	MMERGLN-int	ERV1	chr4MMERGLN-int11103616	ProperStrand	3	chr11	62416952	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	3	-inf
chr15	76735454	76736353	protein_coding	Rpl8	exon	ENSMUSG00000003970	ProperStrand	191	chr3	16104593	16104683	protein_coding	Ythdf3	exon	ENSMUSG00000047213	ProperStrand	22	2	-19.7308
chr4	43505656	43505687	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr7	130336831	130336931	protein_coding	Tnrc6a	utr3	ENSMUSG00000052707	ProperStrand	37	1	-3.9620
chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr5	130924898	130924915	protein_coding	Caln1	utr5	ENSMUSG00000060371	ProperStrand	32	2	-12.3550
chr1	56843758	56843848	LINE	Lx	L1	chr1Lx56843422	NonProperStrand	1	chr7	54442428	54442508	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	1	-inf
chr15	36705298	36706004	protein_coding	Ywhaz	exon	ENSMUSG00000022285	ProperStrand	73	chr16	23111373	23111463	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-1.9867
chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	chr19	8799581	8799620	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-3.2001
chr2	90703789	90703812	protein_coding	Mtch2	exon	ENSMUSG00000027282	ProperStrand	12	chr7	29136525	29136614	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.3856
chr9	55057284	55061717	protein_coding	Fbxo22	exon	ENSMUSG00000032309	ProperStrand	79	chr4	131908357	131908444	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.0451
chr19	48091836	48091855	protein_coding	Ccdc147	intron	ENSMUSG00000046585	ProperStrand	15	chr2	53003875	53003891	protein_coding	Prpf40a	exon	ENSMUSG00000061136	ProperStrand	129	1	-14.6080
chr3	135268101	135268120	protein_coding	Nfkb1	exon	ENSMUSG00000028163	ProperStrand	55	chr10	23505147	23505268	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.3541
chr17	3516620	3516636	protein_coding	Tiam2	exon	ENSMUSG00000023800	ProperStrand	6	chr4	131908320	131908355	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-5.6461
chr6	34259043	34259632	protein_coding	Akr1b3	exon	ENSMUSG00000001642	ProperStrand	71	chr4	131865866	131865956	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-6.2467
chr14	32321863	32321910	protein_coding	Eaf1	utr3	ENSMUSG00000021890	ProperStrand	10	chr14	16271120	16271137	protein_coding	Lrrc3b	utr5	ENSMUSG00000045201	ProperStrand	10	1	-20.3924
chr2	5468232	5468332	protein_coding	Camk1d	intron	ENSMUSG00000039145	ProperStrand	50	chr11	69483136	69483189	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.7653
chr9	103589854	103589906	protein_coding	Tmem108	intron	ENSMUSG00000042757	ProperStrand	6	chr17	24857717	24857807	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	3	-16.1174
chr14	52703790	52703806	protein_coding	Hnrnpc	exon	ENSMUSG00000060373	ProperStrand	75	chr1	102076759	102076793	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	1	-8.9879
chr5	59830942	59830959	LTR	IAPLTR1a_Mm	ERVK	chr5IAPLTR1a_Mm59830823	NonProperStrand	1	chr9	120038497	120038548	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-inf
chr15	59175531	59175549	protein_coding	E430025E21Rik	intron	ENSMUSG00000022350	NonProperStrand	10	chr3	95462994	95463094	protein_coding	Mcl1	exon	ENSMUSG00000038612	ProperStrand	75	1	-16.5813
chr12	3469496	3469512	protein_coding	Asxl2	exon	ENSMUSG00000037486	NonProperStrand	12	chr9	15119358	15119427	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	3	-18.8832
chr4	32781638	32782342	protein_coding	Mdn1	exon	ENSMUSG00000058006	ProperStrand	184	chr11	62418015	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	2	-5.8348
chr11	53939278	53939907	protein_coding	P4ha2	exon	ENSMUSG00000018906	ProperStrand	8	chr7	118219574	118219648	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-8.2090
chrX	93136011	93136027	protein_coding	Las1l	exon	ENSMUSG00000057421	ProperStrand	248	chr12	88778746	88778767	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-3.7631
chr5	74489296	74489321	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr13	63612936	63612952	protein_coding	Ptch1	exon	ENSMUSG00000021466	NonProperStrand	118	1	-4.3171
chr3	153573578	153573597	snoRNA	ENSMUSG00000064731_Snord45b	.	ENSMUSG00000064731	ProperStrand	205	chr1	39605591	39605672	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	2	-8.1293
chr5	24323587	24323647	protein_coding	Rheb	exon	ENSMUSG00000028945	ProperStrand	8	chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	1	-13.6221
chr7	34904214	34910525	protein_coding	Wtip	exon	ENSMUSG00000036459	ProperStrand	19	chr16	23110478	23110568	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	4	-14.8125
chr18	66623033	66623082	protein_coding	Pmaip1	utr3	ENSMUSG00000024521	ProperStrand	3	chr15	71624755	71624799	snoRNA	ENSMUSG00000088895_SNORA81	.	ENSMUSG00000088895	ProperStrand	348	1	-16.1584
chr1	134401005	134401021	protein_coding	Rbbp5	utr3	ENSMUSG00000026439	NonProperStrand	33	chr17	24857746	24857842	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.3507
chr18	60739035	60739052	protein_coding	Myoz3	exon	ENSMUSG00000049173	NonProperStrand	2	chr2	26493449	26493474	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-11.0703
chr11	72694863	72697917	protein_coding	Zzef1	exon	ENSMUSG00000055670	ProperStrand	48	chr6	115757992	115758072	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	3	-13.6530
chr11	3207679	3207769	protein_coding	Patz1	exon	ENSMUSG00000020453	ProperStrand	14	chr7	116664794	116664874	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-5.2856
chr12	86567007	86567107	protein_coding	Eif2b2	exon	ENSMUSG00000004788	ProperStrand	15	chr7	134110716	134111233	protein_coding	Sez6l2	exon	ENSMUSG00000030683	ProperStrand	94	1	-15.2263
chrX	131340951	131341020	protein_coding	Armcx2	exon	ENSMUSG00000033436	ProperStrand	12	chr2	130101240	130101264	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-9.8516
chr18	62149500	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	chr15	79913294	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-1.1152
chr10	80641732	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	chr11	51551381	51551424	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	1	-2.2489
chr5	66008420	66088019	protein_coding	Pds5a	intron	ENSMUSG00000029202	ProperStrand	62	chr16	23110828	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-2.1998
chr16	32891395	32891495	protein_coding	Fyttd1	exon	ENSMUSG00000022800	ProperStrand	31	chr17	35088957	35089006	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-7.1795
chr17	13115655	13115784	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	chr4	131908236	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	19	-1.3479
chr10	27020826	27020847	protein_coding	Lama2	intron	ENSMUSG00000019899	NonProperStrand	36	chr18	35714190	35714290	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.4028
chr11	119684318	119704996	antisense	A430071A18Rik	.	ENSMUSG00000085081	ProperStrand	8	chr7	52381857	52381884	protein_coding	Rpl13a	exon	ENSMUSG00000074129	ProperStrand	269	2	-18.8207
chr19	45409733	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr8	73419657	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	4	-1.4420
chr14	65672665	65672755	protein_coding	Extl3	utr3	ENSMUSG00000021978	ProperStrand	36	chr16	23111374	23111454	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.0295
chr19	5800645	5800695	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr4	49543841	49543857	protein_coding	Zfp189	utr3	ENSMUSG00000039634	ProperStrand	18	1	-9.9774
chr9	78023109	78023162	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr3	153574613	153574654	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	4	-8.9192
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr18	50006286	50008366	protein_coding	Dmxl1	exon	ENSMUSG00000037416	ProperStrand	27	3	-19.4226
chr6	88275880	88288357	protein_coding	Eefsec	intron	ENSMUSG00000033216	ProperStrand	23	chr16	23110941	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-4.3078
chr15	3533337	3533358	protein_coding-noncoding	Ghr	utr3	ENSMUSG00000055737	NonProperStrand	1	chr8	87525135	87525238	protein_coding	Hook2	exon	ENSMUSG00000052566	ProperStrand	204	1	-inf
chrX	31247831	31635729	LINE	L1Md_F2	L1	chrXL1Md_F231247653	NonProperStrand	11	chr9	120039533	120039620	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	3	-15.4383
chr5	31093938	31093956	protein_coding	Dpysl5	exon	ENSMUSG00000029168	NonProperStrand	38	chr11	69483188	69483268	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.2572
chr12	52849618	52849634	protein_coding	Hectd1	exon	ENSMUSG00000035247	NonProperStrand	43	chr2	18508668	18508710	tRNA	tRNA1947-AsnGTT	.	1730840	ProperStrand	179	1	-11.7928
chr15	8109562	8109652	protein_coding	Nup155	utr3	ENSMUSG00000022142	ProperStrand	91	chr9	75504692	75504772	protein_coding	Scg3	intron	ENSMUSG00000032181	ProperStrand	3	1	-20.8182
chr2	56682384	56682401	DNA	RCHARR1	MER1_type	chr2RCHARR156682082	ProperStrand	4	chr10	23505558	23505626	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	4	-inf
chr11	77994462	77995091	protein_coding	Rpl23a	exon	ENSMUSG00000058546	ProperStrand	121	chr16	23111373	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	9	-9.7255
chr4	116862572	116862662	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	chr18	35714154	35714280	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	4	-2.1012
chr1	173433177	173433293	protein_coding	B930036N10Rik	utr3	ENSMUSG00000091993	ProperStrand	150	chr11	97643009	97643089	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-2.1087
chr19	3851699	3851716	processed_transcript	Gm16066	.	ENSMUSG00000082848	NonProperStrand	11	chr5	121655016	121655073	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-7.0917
chr1	37954640	37954993	protein_coding	Mrpl30	exon	ENSMUSG00000026087	ProperStrand	3	chr9	15119737	15119767	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-8.7352
chr13	100182365	100182381	protein_coding	Mrps27	intron	ENSMUSG00000041632	ProperStrand	21	chr1	162967511	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-5.4889
chr9	26440743	26440759	DNA	MER5A	MER1_type	chr9MER5A26440741	ProperStrand	108	chr2	26494775	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.0962
chr12	84040062	84040078	protein_coding	Rgs6	intron	ENSMUSG00000021219	NonProperStrand	65	chr2	130101257	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-6.4327
chr11	96133152	96133171	protein_coding	Hoxb9	exon	ENSMUSG00000020875	NonProperStrand	22	chr9	120039551	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-8.6421
chr17	35286976	35287024	protein_coding	Prrc2a	exon	ENSMUSG00000024393	ProperStrand	315	chr10	110918549	110918639	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	3	-2.8114
chr2	38436999	38437079	protein_coding	Nek6	intron	ENSMUSG00000026749	ProperStrand	10	chr9	15119675	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-6.0614
chr15	98362297	98364006	protein_coding	2310037I24Rik	exon	ENSMUSG00000022992	ProperStrand	91	chr19	8946201	8946389	protein_coding	Ubxn1	exon	ENSMUSG00000071655	ProperStrand	68	1	-12.2246
chr10	60806404	60806494	protein_coding	X99384	exon	ENSMUSG00000020092	ProperStrand	60	chr2	26494720	26494800	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.1070
chr4	148703835	148704340	protein_coding	Ube4b	exon	ENSMUSG00000028960	ProperStrand	66	chr4	131908300	131908357	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-2.4625
chr14	55513043	55513133	protein_coding	Pabpn1	exon	ENSMUSG00000022194	ProperStrand	22	chr19	8963093	8963165	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.0882
chr13	23627681	23627724	protein_coding	Hist1h3g	exon	ENSMUSG00000062417	ProperStrand	25	chr4	138966135	138966334	protein_coding	Ubr4	exon	ENSMUSG00000066036	ProperStrand	304	1	-11.8326
chr17	24857694	24857774	protein_coding-noncoding	Rps2	utr5	ENSMUSG00000044533	ProperStrand	29	chr12	106269353	106269443	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-5.5475
chr8	13416893	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr9	59513013	59519469	protein_coding	Pkm2	utr5	ENSMUSG00000032294	ProperStrand	1296	8	-11.9757
chr2	90235319	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	120390901	120390991	protein_coding	Arntl	intron	ENSMUSG00000055116	NonProperStrand	3	1	-10.7414
chr6	136535571	136535663	protein_coding	Atf7ip	exon	ENSMUSG00000030213	ProperStrand	22	chr11	68886974	68887038	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-6.1004
chr5	37667536	37667552	protein_coding	Crmp1	exon	ENSMUSG00000029121	ProperStrand	85	chr17	24856651	24856753	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-5.7417
chr10	80643034	80643092	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr1	88248600	88248662	snoRNA	ENSMUSG00000064696_SNORD20	.	ENSMUSG00000064696	ProperStrand	89	1	-5.3270
chr6	60710797	60710814	protein_coding	Snca	intron	ENSMUSG00000025889	ProperStrand	1	chr18	35714162	35714262	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-inf
chr9	78326375	78326441	protein_coding	Eef1a1	utr3	ENSMUSG00000037742	ProperStrand	1990	chr9	15119287	15119368	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	10	-6.2369
chr11	69482250	69482691	protein_coding	Eif4a1	exon	ENSMUSG00000059796	ProperStrand	108	chr5	74489643	74489676	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	2	-4.7380
chr6	120711975	120712010	protein_coding	Cecr2	exon	ENSMUSG00000071226	ProperStrand	39	chr10	23505151	23505219	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.8710
chr7	29171541	29171558	protein_coding	Med29	utr3	ENSMUSG00000003444	NonProperStrand	134	chr11	116535920	116535982	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	1	-4.3563
chr19	9026203	9026248	protein_coding	Mta2	utr3	ENSMUSG00000071646	ProperStrand	70	chr1	89673673	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-2.9859
chr1	74326695	74326739	protein_coding	Aamp	utr3	ENSMUSG00000006299	ProperStrand	16	chr11	60523196	60523539	protein_coding	Llgl1	exon	ENSMUSG00000020536	ProperStrand	20	1	-18.0295
chr8	127363575	127363628	protein_coding	2810004N23Rik	utr3	ENSMUSG00000031984	ProperStrand	22	chr1	155287326	155287354	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	3	-19.6910
chr14	31998225	31998502	protein_coding	Nisch	exon	ENSMUSG00000021910	ProperStrand	125	chr13	23662870	23662937	protein_coding	Hist1h2ae	exon	ENSMUSG00000069272	ProperStrand	51	1	-12.1674
chr16	16323855	16324068	protein_coding	Dnm1l	exon	ENSMUSG00000022789	NonProperStrand	38	chr7	74189892	74189909	protein_coding	Adamts17	intron	ENSMUSG00000058145	NonProperStrand	73	1	-13.8441
chr3	58349500	58349531	protein_coding	Eif2a	exon	ENSMUSG00000027810	ProperStrand	11	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-10.3714
chr10	110065093	110065183	LINE	L1Md_A	L1	chr10L1Md_A110064508	ProperStrand	1	chr17	4082150	4082230	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	1	-inf
chr15	96291106	96291124	protein_coding	Scaf11	utr5	ENSMUSG00000033228	NonProperStrand	1	chr2	164015899	164015916	protein_coding	Wfdc12	exon	ENSMUSG00000042845	ProperStrand	2	1	-inf
chr7	53082427	53082512	protein_coding	Grwd1	intron	ENSMUSG00000053801	ProperStrand	7	chr4	131908725	131908771	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.0493
chr11	60370927	60370943	protein_coding	Alkbh5	utr3	ENSMUSG00000042650	ProperStrand	203	chr1	20552542	20552558	protein_coding	Pkhd1	exon	ENSMUSG00000043760	NonProperStrand	49	1	-11.2771
chr12	104317206	104317223	protein_coding	Unc79	exon	ENSMUSG00000021198	ProperStrand	99	chr16	23110456	23110520	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.6530
chr7	151765212	151765228	antisense	Gm10574	.	ENSMUSG00000073778	ProperStrand	357	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-5.0762
chr5	92715767	92715795	protein_coding	Sdad1	utr3	ENSMUSG00000029415	ProperStrand	63	chr14	76247712	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	4	-13.2118
chr4	129725306	129725324	protein_coding	Col16a1	utr5	ENSMUSG00000040690	ProperStrand	21	chr4	131908689	131908789	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.9128
chr13	67023867	67029107	protein_coding	Mterfd1	exon	ENSMUSG00000021519	ProperStrand	1	chr5	74489594	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-inf
chr9	121273008	121273026	protein_coding	Trak1	intron	ENSMUSG00000032536	ProperStrand	152	chr11	97643002	97643076	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.0609
chr17	66468411	66468427	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	chr9	120039578	120039678	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-1.4426
chr14	75730379	75730446	protein_coding	Zc3h13	exon	ENSMUSG00000022000	ProperStrand	42	chr1	33828651	33828669	protein_coding	Zfp451	intron	ENSMUSG00000042197	NonProperStrand	393	1	-10.2672
chr5	123622050	123622066	protein_coding	Hpd	exon	ENSMUSG00000029445	ProperStrand	254	chr7	133520549	133520566	protein_coding	Spns1	exon	ENSMUSG00000030741	NonProperStrand	16	1	-13.1076
chrX	138661347	138661446	protein_coding	Nxt2	utr5	ENSMUSG00000042271	ProperStrand	20	chr16	23111389	23111431	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	6	-17.1348
chr4	135420046	135420136	protein_coding	Srsf10	utr3	ENSMUSG00000028676	ProperStrand	31	chr3	123210905	123210985	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.2114
chr19	5801003	5801039	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr7	109149271	109149287	protein_coding	Numa1	exon	ENSMUSG00000066306	NonProperStrand	171	1	-5.4796
chr11	97258516	97258542	protein_coding	Socs7	utr3	ENSMUSG00000038485	ProperStrand	12	chr18	35716704	35716761	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-8.5963
chr17	24869755	24869771	protein_coding	Rpl3l	utr5	ENSMUSG00000002500	NonProperStrand	56	chr19	8798740	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-4.9343
chr17	35822057	35822256	protein_coding	Ddr1	exon	ENSMUSG00000003534	ProperStrand	129	chr19	8798740	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	2	-5.7371
chr11	117611067	117611109	protein_coding	Tnrc6c	exon	ENSMUSG00000025571	ProperStrand	51	chr7	29136554	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.6434
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	1	-4.8643
chr12	68766434	68766514	LINE	L1_Mus2	L1	chr12L1_Mus268766146	ProperStrand	12	chr14	82762800	82762890	LINE	L1Md_A	L1	chr14L1Md_A82758223	ProperStrand	1	1	-inf
chr9	78023196	78023262	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr5	116174721	116174738	protein_coding	Ccdc64	exon	ENSMUSG00000041609	ProperStrand	51	1	-6.1981
chr15	45130790	45130809	LINE	L1_Mus2	L1	chr15L1_Mus245129537	NonProperStrand	17	chrX	93136011	93136027	protein_coding	Las1l	exon	ENSMUSG00000057421	ProperStrand	248	1	-13.0296
chr11	86533104	86533819	protein_coding	Cltc	exon	ENSMUSG00000047126	ProperStrand	319	chr8	87426787	87426805	protein_coding	Klf1	exon	ENSMUSG00000054191	NonProperStrand	70	1	-9.6556
chr5	99305586	99305607	protein_coding	Bmp3	intron	ENSMUSG00000029335	ProperStrand	1	chr7	150717298	150717415	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-inf
chr4	125385266	125385356	protein_coding	Grik3	utr3	ENSMUSG00000001985	ProperStrand	126	chr11	98858117	98859150	protein_coding	Top2a	exon	ENSMUSG00000020914	ProperStrand	324	1	-8.4487
chr2	84466336	84466359	protein_coding	Ctnnd1	intron	ENSMUSG00000034101	ProperStrand	26	chr18	33954899	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-5.1001
chr6	108773313	108773341	protein_coding	Arl8b	utr3	ENSMUSG00000030105	ProperStrand	28	chr7	116663715	116663767	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-9.6073
chr13	47342211	47342228	protein_coding	Rnf144b	utr3	ENSMUSG00000038068	ProperStrand	3	chr7	52382014	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-13.0603
chr15	81110991	81111009	SINE	ID4	ID	chr15ID481110956	ProperStrand	272	chr1	162966189	162966210	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-4.6162
chr6	87138823	87154416	protein_coding	Antxr1	exon	ENSMUSG00000033420	ProperStrand	70	chrX	84483702	84483742	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-7.9408
chr14	8778231	8778285	protein_coding	Flnb	intron	ENSMUSG00000025278	ProperStrand	124	chr1	162965981	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-2.3186
chr7	13516148	13516203	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr1	39634128	39634144	protein_coding	Rnf149	utr5	ENSMUSG00000048234	NonProperStrand	20	1	-10.8896
chr17	85482653	85489599	protein_coding	Prepl	utr5	ENSMUSG00000024127	ProperStrand	106	chrX	34622959	34623036	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-2.1852
chr15	77998363	78004244	protein_coding	Ift27	exon	ENSMUSG00000016637	ProperStrand	3	chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	2	-21.3419
chr7	86583133	86583223	protein_coding	Fanci	exon	ENSMUSG00000039187	ProperStrand	25	chr5	130300463	130300543	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	9	-inf
chr7	120694764	120694787	protein_coding	Far1	exon	ENSMUSG00000030759	ProperStrand	72	chr18	33954874	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-5.4534
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr5	127737478	127737494	antisense	1700085B03Rik	.	ENSMUSG00000087104	ProperStrand	55	1	-8.8903
chr16	91641572	91641879	protein_coding	Gart	exon	ENSMUSG00000022962	ProperStrand	200	chr17	35089184	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	2	-5.4983
chr10	120471427	120471505	protein_coding	Wif1	exon	ENSMUSG00000020218	ProperStrand	3	chr3	51192977	51192995	protein_coding	4930583H14Rik	exon	ENSMUSG00000037161	ProperStrand	14	1	-inf
chr7	52958453	52958469	protein_coding	Car11	exon	ENSMUSG00000003273	NonProperStrand	250	chr3	68889026	68889072	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-0.9976
chr11	117729369	117729386	protein_coding	Tha1	utr3	ENSMUSG00000017713	NonProperStrand	56	chr16	23111689	23111719	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-3.6464
chr1	20552542	20552559	protein_coding	Pkhd1	exon	ENSMUSG00000043760	NonProperStrand	49	chr19	8963038	8963175	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-6.8820
chr2	28368858	28368877	protein_coding	Ralgds	utr5	ENSMUSG00000026821	NonProperStrand	60	chrX	136242613	136242631	protein_coding	Tbc1d8b	intron	ENSMUSG00000042473	NonProperStrand	27	1	-14.9329
chr7	30231503	30231593	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	chr1	63225619	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	10	-23.3449
chr9	120038467	120038672	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	chr9	15119287	15119426	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	24	-1.3220
chr12	77415430	77415452	protein_coding	Mthfd1	exon	ENSMUSG00000021048	ProperStrand	71	chr5	108334224	108334332	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-4.4968
chr4	131908524	131908613	protein_coding	Rcc1	utr5	ENSMUSG00000028896	ProperStrand	55	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-2.5927
chr6	24684480	24684497	protein_coding	Hyal6	exon	ENSMUSG00000029679	NonProperStrand	114	chr4	131865855	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	5	-5.7751
chr15	38008367	38008385	protein_coding	Ubr5	utr5	ENSMUSG00000037487	ProperStrand	258	chr13	8766423	8766513	protein_coding	Adarb2	utr3	ENSMUSG00000052551	NonProperStrand	61	1	-10.3559
chr9	11812497	11812519	LTR	RLTR6_Mm	ERV1	chr9RLTR6_Mm11812047	NonProperStrand	2	chr4	140273552	140274292	protein_coding	Rcc2	exon	ENSMUSG00000040945	ProperStrand	228	1	-18.3799
chr1	60154439	60154529	protein_coding	Wdr12	utr5	ENSMUSG00000026019	ProperStrand	36	chr4	131908810	131908890	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.9880
chr2	173592438	173592468	protein_coding	Vapb	intron	ENSMUSG00000054455	ProperStrand	29	chr7	148634776	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-5.3877
chr2	32818840	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	chr1	161270526	161270554	snoRNA	ENSMUSG00000089536_Scarna3a	.	ENSMUSG00000089536	ProperStrand	247	1	-2.8221
chr18	34792190	34792214	protein_coding	Kif20a	exon	ENSMUSG00000003779	ProperStrand	50	chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	1	-8.9589
chr17	6102606	6102625	LTR	ORR1D2	MaLR	chr17ORR1D26102460	NonProperStrand	10	chr7	117166722	117166850	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	10	-inf
chr5	77739619	77742239	protein_coding	Polr2b	exon	ENSMUSG00000029250	ProperStrand	68	chr9	120038622	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.8168
chr1	154686110	154692667	protein_coding	Smg7	exon	ENSMUSG00000042772	ProperStrand	88	chr16	23111373	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	5	-5.3704
chr4	149989467	149989507	protein_coding	Rere	exon	ENSMUSG00000039852	ProperStrand	76	chr4	41707315	41707332	protein_coding	Il11ra1	utr5	ENSMUSG00000073889	ProperStrand	128	1	-11.3164
chr15	100299084	100299100	lincRNA	5330439K02Rik	exon	ENSMUSG00000092050	NonProperStrand	36	mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	1	-6.9163
chr13	68759738	68764669	protein_coding	Adcy2	exon	ENSMUSG00000021536	ProperStrand	237	chr7	51789289	51789337	protein_coding	Pold1	exon	ENSMUSG00000038644	ProperStrand	50	1	-10.9259
chr11	55212128	55212731	protein_coding	Sparc	exon	ENSMUSG00000018593	ProperStrand	48	chr7	51505836	51505885	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	2	-14.3692
mmu-miR-6240	3	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr14	32479927	32479943	protein_coding	Btd	exon	ENSMUSG00000021900	NonProperStrand	74	1	-5.4927
chr4	128899901	128899924	protein_coding	C77080	exon	ENSMUSG00000050390	ProperStrand	48	chr11	97642952	97643047	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-4.9786
chr1	187230995	187231372	protein_coding	Eprs	exon	ENSMUSG00000026615	ProperStrand	149	chr18	35714210	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	4	-7.2494
chr2	180646155	180646180	protein_coding	Ythdf1	exon	ENSMUSG00000038848	ProperStrand	59	chr10	23505150	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.2562
chr15	82725599	82725637	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	chr11	62416575	62416641	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	3	-3.3307
chr5	115940299	115940405	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	chr14	76247720	76247821	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-1.2605
chr2	138188029	138188045	protein_coding	Btbd3	intron	ENSMUSG00000062098	NonProperStrand	121	chr11	106362304	106362378	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-4.4839
chr11	98878344	98878456	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	chr5	108336363	108336491	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	9	-4.2087
chr3	96132414	96132514	snRNA	ENSMUSG00000075978_U1	.	ENSMUSG00000075978	ProperStrand	132	chr19	8799831	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-3.4592
chr7	26472435	26472451	protein_coding	Tgfb1	utr5	ENSMUSG00000002603	NonProperStrand	154	chr2	174248898	174248955	protein_coding	Th1l	exon	ENSMUSG00000016253	ProperStrand	40	1	-12.2402
chr1	164529064	164529080	protein_coding	Vamp4	utr3	ENSMUSG00000026696	NonProperStrand	8	chr4	131908688	131908800	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.7736
chr7	53089954	53089976	protein_coding	Grin2d	intron	ENSMUSG00000002771	NonProperStrand	31	chr8	46855240	46855906	protein_coding	Sorbs2	exon	ENSMUSG00000031626	ProperStrand	50	1	-15.0039
chr4	34751576	34751666	protein_coding	Zfp292	utr3	ENSMUSG00000039967	ProperStrand	45	chr12	17552950	17553030	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-5.6510
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr5	108334193	108334288	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	2	-1.7848
chr3	90197173	90197671	protein_coding	Ints3	exon	ENSMUSG00000027933	ProperStrand	87	chr7	53435093	53435110	protein_coding	Abcc8	intron	ENSMUSG00000040136	ProperStrand	15	1	-15.3892
chr4	116826464	116826537	protein_coding	Rps8	utr3	ENSMUSG00000047675	ProperStrand	262	chr11	116704532	116704549	protein_coding	Jmjd6	utr5	ENSMUSG00000056962	ProperStrand	92	1	-9.5006
chr6	142442431	142442476	protein_coding	Ldhb	intron	ENSMUSG00000030246	ProperStrand	224	chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	2	-5.6926
chr15	99988311	99988327	protein_coding	Dip2b	exon	ENSMUSG00000023026	ProperStrand	48	chr4	122968643	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	2	-10.8564
chr13	51743580	51743659	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	chr1	187066802	187066892	snoRNA	ENSMUSG00000077571_Snora36b	.	ENSMUSG00000077571	ProperStrand	244	1	-4.1366
chr4	123352891	123352957	protein_coding	Macf1	intron	ENSMUSG00000028649	NonProperStrand	17	chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	1	-12.3934
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr4	139035370	139035401	protein_coding	Ubr4	exon	ENSMUSG00000066036	ProperStrand	304	1	-3.7872
chr4	114730412	114730430	protein_coding	Tal1	utr5	ENSMUSG00000028717	NonProperStrand	69	chr10	39978451	39978471	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-5.1873
chr19	23281189	23281253	SINE	B3	B2	chr19B323281090	NonProperStrand	3	chr15	82725617	82725636	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	3	-inf
chr2	112202959	112202975	protein_coding	Slc12a6	utr3	ENSMUSG00000027130	NonProperStrand	72	chr4	131865866	131865977	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-2.8042
chr8	124405872	124405942	protein_coding	Slc7a5	utr3	ENSMUSG00000040010	ProperStrand	166	chr18	75161534	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	9	-19.5298
chr13	52742087	52742125	protein_coding	Syk	utr3	ENSMUSG00000021457	ProperStrand	20	chr1	162967521	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-9.1870
chr19	27837820	27837836	protein_coding	Rfx3	utr3	ENSMUSG00000040929	ProperStrand	92	chr5	90729005	90729034	protein_coding	Ankrd17	intron	ENSMUSG00000055204	ProperStrand	77	1	-11.9530
mmu-miR-6240	4	25	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr10	83989627	83989643	protein_coding	Ckap4	utr3	ENSMUSG00000046841	ProperStrand	60	1	-5.9036
chr10	83996201	83996277	protein_coding	Ckap4	exon	ENSMUSG00000046841	ProperStrand	60	chr5	130300531	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.5095
chr15	10504478	10504506	protein_coding	Rai14	exon	ENSMUSG00000022246	ProperStrand	180	chr18	7920193	7921468	protein_coding	Wac	exon	ENSMUSG00000024283	ProperStrand	38	1	-12.0311
chr12	3968611	3968627	protein_coding	Efr3b	exon	ENSMUSG00000020658	ProperStrand	142	chr7	150717363	150717425	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-3.8582
chr17	32442620	32453285	protein_coding	Akap8	exon	ENSMUSG00000024045	ProperStrand	339	chr18	35716685	35716870	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	5	-2.1856
chr11	43937121	43937139	lincRNA	Gm12153	intron	ENSMUSG00000087172	NonProperStrand	1	chr16	23111371	23111442	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-inf
chr12	52711095	52742711	protein_coding	Strn3	utr3	ENSMUSG00000020954	ProperStrand	10	chr16	23110941	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-7.6230
chr2	83693562	83693578	protein_coding	Fam171b	exon	ENSMUSG00000048388	NonProperStrand	175	chr19	8963060	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-0.7538
chr10	94151579	94151595	protein_coding	Ccdc41	utr5	ENSMUSG00000020024	NonProperStrand	34	chr1	55146009	55146051	protein_coding	Hspe1	exon	ENSMUSG00000073676	ProperStrand	31	1	-15.7472
chr4	115484063	115484080	protein_coding	Atpaf1	utr3	ENSMUSG00000028710	ProperStrand	202	chr16	23111373	23111505	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-1.2643
chr12	72038960	72039000	protein_coding	Actr10	exon	ENSMUSG00000021076	ProperStrand	21	chr7	117190037	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-5.3375
chr10	41185105	41185122	protein_coding	Zbtb24	utr3	ENSMUSG00000019826	ProperStrand	17	chr9	15119634	15119758	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.9895
chrX	72661761	72661778	protein_coding	Mtcp1	utr5	ENSMUSG00000090110	ProperStrand	19	chr5	121655016	121655136	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-9.7842
chr2	180422274	180422364	protein_coding	Dido1	exon	ENSMUSG00000038914	ProperStrand	81	chr7	116664826	116664906	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.0473
chr16	90386835	90386853	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	chr14	76372292	76372409	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	1	-7.8913
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr13	58400751	58400770	protein_coding	Kif27	intron	ENSMUSG00000060176	ProperStrand	75	1	-7.2949
chr9	78326996	78328471	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr10	39978331	39978425	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	9	-6.3975
chr15	99079223	99079801	protein_coding	Mcrs1	exon	ENSMUSG00000037570	ProperStrand	46	chr1	187066884	187066917	snoRNA	ENSMUSG00000077571_Snora36b	.	ENSMUSG00000077571	ProperStrand	244	5	-21.7618
chr17	75053857	75054524	protein_coding	Birc6	exon	ENSMUSG00000024073	NonProperStrand	36	chr3	123210853	123210930	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-7.5922
chr14	58425772	58425807	protein_coding	F630043A04Rik	utr3	ENSMUSG00000021965	ProperStrand	24	chr4	131908302	131908355	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.9196
chr12	3968611	3968627	protein_coding	Efr3b	exon	ENSMUSG00000020658	ProperStrand	142	chr5	121655099	121655129	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.2231
chr11	120207176	120209397	protein_coding	Actg1	exon	ENSMUSG00000062825	ProperStrand	178	chr4	131865912	131865986	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-1.7086
chr11	94098976	94098992	protein_coding	Wfikkn2	exon	ENSMUSG00000044177	ProperStrand	19	chr1	162965531	162965594	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.4761
chr19	8963026	8963190	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	chr1	162967115	162967178	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	8	-2.2562
chr18	58721207	58721225	protein_coding	Slc27a6	intron	ENSMUSG00000024600	ProperStrand	13	chr12	17552949	17553032	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	2	-13.0988
chr13	31936257	32289282	protein_coding	Gmds	intron	ENSMUSG00000038372	ProperStrand	27	chr7	116664794	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	5	-16.7750
chr13	40982774	40982791	protein_coding	Gcnt2	exon	ENSMUSG00000021360	ProperStrand	31	chr19	8798749	8798813	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-6.0946
chr4	18504637	18504657	processed_transcript	Gm11867	.	ENSMUSG00000087402	NonProperStrand	5	chr16	23110454	23110557	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-7.3464
chr13	98257216	98266946	lincRNA	Gm11019	exon	ENSMUSG00000078952	ProperStrand	113	chr16	23110829	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	10	-4.9701
chr2	32818117	32818155	protein_coding	Rpl12	exon	ENSMUSG00000038900	ProperStrand	167	chr9	15118246	15118303	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-1.7216
chr8	60437146	60437162	protein_coding	Galntl6	exon	ENSMUSG00000061864	ProperStrand	44	chr4	131908236	131908286	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.8887
chr11	69483136	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	chr9	15118523	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	3	-0.7430
chr5	34112034	34112050	protein_coding	Letm1	exon	ENSMUSG00000005299	NonProperStrand	145	chr19	8963027	8963082	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-0.9731
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr19	10823569	10823587	protein_coding	A430093F15Rik	intron	ENSMUSG00000067577	NonProperStrand	34	1	-8.8799
chr10	25221923	25222013	protein_coding	Epb4.1l2	utr3	ENSMUSG00000019978	ProperStrand	105	chr11	97643006	97643086	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.5737
chr19	6058485	6059146	protein_coding	Fau	exon	ENSMUSG00000038274	ProperStrand	64	chr10	23505197	23505277	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.1465
chr1	162965563	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr4	131866614	131866675	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	2	-0.7839
chr2	26872646	26872669	protein_coding	5930434B04Rik	utr3	ENSMUSG00000015488	ProperStrand	1	chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	1	-inf
chr6	56800715	56801411	protein_coding	Fkbp9	exon	ENSMUSG00000029781	ProperStrand	39	chr2	29926357	29926377	protein_coding	Set	intron	ENSMUSG00000054766	ProperStrand	167	1	-12.1282
chr18	31858381	31858481	protein_coding	Sap130	exon	ENSMUSG00000024260	ProperStrand	32	chr10	116499190	116499888	protein_coding	Cct2	exon	ENSMUSG00000034024	ProperStrand	100	1	-13.5619
chr8	19985083	19985173	pseudogene	2610005L07Rik	.	ENSMUSG00000071793	ProperStrand	40	chr7	29136553	29136649	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	7	-20.2291
chr12	88488443	88496424	protein_coding	Pomt2	exon	ENSMUSG00000034126	NonProperStrand	331	chr11	106904992	106905055	protein_coding	Bptf	exon	ENSMUSG00000040481	ProperStrand	70	1	-9.5819
chr1	88426317	88426577	protein_coding	Ptma	exon	ENSMUSG00000026238	ProperStrand	385	chr8	98269959	98270014	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-2.1321
chr2	76701452	76701468	protein_coding	Ttn	exon	ENSMUSG00000051747	ProperStrand	66	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-5.0266
chr14	27199812	27199828	antisense	4933413J09Rik	.	ENSMUSG00000021874	ProperStrand	51	chr4	24515456	24515485	protein_coding	Mms22l	exon	ENSMUSG00000045751	ProperStrand	21	1	-15.7625
chr15	77597977	77597993	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr4	116827128	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-2.7604
chr19	11015616	11015632	protein_coding	Gpr44	exon	ENSMUSG00000034117	NonProperStrand	118	chr13	22127738	22127788	protein_coding	Hist1h2bk	utr5	ENSMUSG00000062727	ProperStrand	16	1	-14.6439
chr3	107467591	107467622	protein_coding	Ahcyl1	utr3	ENSMUSG00000027893	ProperStrand	81	chr2	144087321	144087357	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	3	-13.7103
chr5	123622050	123622066	protein_coding	Hpd	exon	ENSMUSG00000029445	ProperStrand	254	chr5	114217346	114217384	protein_coding	Gm3511	utr3	ENSMUSG00000069196	ProperStrand	2	1	-17.9446
chr7	35706516	35706627	protein_coding	Pepd	intron	ENSMUSG00000063931	ProperStrand	12	chr10	110918551	110918590	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-6.5914
chr4	138670918	138670957	protein_coding	Minos1	intron	ENSMUSG00000050608	ProperStrand	11	chr1	162965976	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-11.2983
chr18	24777632	24777920	protein_coding	Elp2	exon	ENSMUSG00000024271	ProperStrand	46	chr11	62416986	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	4	-19.9677
chr4	129192045	129192135	protein_coding	Marcksl1	exon	ENSMUSG00000047945	ProperStrand	52	chr11	69483200	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.6966
chr5	23958288	23958305	protein_coding	Agap3	exon	ENSMUSG00000023353	ProperStrand	39	chr19	8798484	8798516	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-6.0570
chr1	182791293	182791337	protein_coding	BC031781	exon	ENSMUSG00000038806	ProperStrand	64	chr12	92811869	92811959	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	1	-8.4420
chr16	96377773	96377863	protein_coding	Wrb	utr3	ENSMUSG00000023147	ProperStrand	30	chr16	23110911	23110991	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0481
chr4	98474639	98474729	protein_coding	Kank4	intron	ENSMUSG00000035407	ProperStrand	35	chr10	23505154	23505234	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.0450
chr10	62869950	62871022	protein_coding	Dnajc12	exon	ENSMUSG00000036764	ProperStrand	4	chr16	23110472	23110552	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-7.8518
chr15	98687061	98687123	protein_coding	Mll2	exon	ENSMUSG00000048154	ProperStrand	170	chr1	162967515	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-1.7010
chr2	23050890	23052422	protein_coding	Yme1l1	exon	ENSMUSG00000026775	ProperStrand	20	chr3	95998262	95998298	protein_coding	Sv2a	utr3	ENSMUSG00000038486	ProperStrand	2	2	-inf
chr2	30479348	30479364	LINE	L1M5	L1	chr2L1M530479194	ProperStrand	10	chr7	28090448	28090502	protein_coding	Ltbp4	exon	ENSMUSG00000040488	ProperStrand	91	1	-16.1210
chr3	141975432	141975490	protein_coding	Pdlim5	exon	ENSMUSG00000028273	ProperStrand	17	chr8	74008400	74008417	protein_coding	Ano8	exon	ENSMUSG00000034863	NonProperStrand	171	1	-13.7741
chr18	60937530	60938088	protein_coding	Rps14	exon	ENSMUSG00000024608	ProperStrand	154	chr19	8963027	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-0.9001
chr6	71859193	71862891	protein_coding	Polr1a	exon	ENSMUSG00000049553	ProperStrand	109	chr7	29136575	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.4268
chr5	29895932	29895951	protein_coding	Ube3c	utr5	ENSMUSG00000039000	ProperStrand	48	chr7	88489430	88489446	protein_coding	Rps17	intron	ENSMUSG00000061787	ProperStrand	105	1	-12.6392
chr2	91770174	91770243	protein_coding	Mdk	utr3	ENSMUSG00000027239	ProperStrand	56	chr16	23111777	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-7.7089
chr7	94444401	94445980	protein_coding	Nox4	exon	ENSMUSG00000030562	ProperStrand	4	chr10	23505152	23505255	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-6.2798
chr11	113059709	113059726	lincRNA	2610035D17Rik	intron	ENSMUSG00000087259	NonProperStrand	38	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-9.5117
chr11	48616632	48616714	protein_coding-noncoding	Gnb2l1	utr5	ENSMUSG00000020372	ProperStrand	21	chr5	111219476	111219894	protein_coding	Ulk1	exon	ENSMUSG00000029512	ProperStrand	92	1	-14.5804
chr9	14521224	14521241	protein_coding	Piwil4	intron	ENSMUSG00000036912	ProperStrand	24	chr10	23505168	23505234	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.6868
chr8	37159657	37159676	protein_coding	D8Ertd82e	intron	ENSMUSG00000050271	NonProperStrand	3	chr19	8798754	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-11.0963
chr17	35822057	35822257	protein_coding	Ddr1	exon	ENSMUSG00000003534	ProperStrand	129	chr17	24857750	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	7	-10.6539
chr7	17014584	17014674	protein_coding	Zc3h4	exon	ENSMUSG00000059273	ProperStrand	95	chr18	33954824	33954904	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-2.6821
chr11	100275659	100275677	protein_coding	Leprel4	exon	ENSMUSG00000006931	ProperStrand	32	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-9.8591
chr6	58258558	58258648	LINE	L1_Mus3	L1	chr6L1_Mus358258426	NonProperStrand	1	chr7	116663662	116663742	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-inf
chr1	136859251	136859298	protein_coding	Ube2t	utr5	ENSMUSG00000026429	ProperStrand	12	chr2	26494777	26494825	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-10.2021
chr4	151730301	151730737	protein_coding	Chd5	exon	ENSMUSG00000005045	NonProperStrand	147	chr8	113521616	113521702	protein_coding	Ddx19a	utr5	ENSMUSG00000015023	ProperStrand	21	1	-13.6422
chr15	76266534	76267744	protein_coding	Heatr7a	exon	ENSMUSG00000022558	ProperStrand	48	chr16	23111373	23111453	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.5796
chr17	4082092	4082257	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr7	29136525	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	4	-1.9554
chr8	120139175	120139201	protein_coding	Plcg2	exon	ENSMUSG00000034330	ProperStrand	57	chr9	120039542	120039632	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	10	-19.6921
chr15	51801543	51801643	protein_coding	Rad21	exon	ENSMUSG00000022314	ProperStrand	85	chr14	76372292	76372365	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	1	-8.2935
chr4	43505805	43505933	protein_coding	Ccdc107	intron	ENSMUSG00000028461	ProperStrand	69	chr16	96343283	96343305	protein_coding	Hmgn1	utr3	ENSMUSG00000040681	NonProperStrand	4	2	-20.3785
chr2	49365263	49365316	protein_coding	Epc2	intron	ENSMUSG00000069495	ProperStrand	15	chr11	98878346	98878446	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-9.0781
chr13	51743581	51743703	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	chr6	71832595	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	2	-0.9377
chr10	90432659	90432677	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	chr3	19528533	19528550	protein_coding	1700064H15Rik	exon	ENSMUSG00000082766	NonProperStrand	78	1	-10.0916
chr19	53676012	53689602	protein_coding	Smc3	exon	ENSMUSG00000024974	ProperStrand	61	chr5	130300420	130300510	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.4812
chr15	82725599	82725636	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	chr13	23654004	23654104	protein_coding	Hist1h3e	exon	ENSMUSG00000069273	ProperStrand	30	1	-9.9190
chr2	25915656	25915672	protein_coding	Nacc2	exon	ENSMUSG00000026932	ProperStrand	98	chr1	162966813	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-5.2978
chr18	85150581	85150671	protein_coding	Fbxo15	exon	ENSMUSG00000034391	ProperStrand	23	chr8	73419706	73419786	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.9417
chr2	167836657	167836685	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	chr15	71624754	71624796	snoRNA	ENSMUSG00000088895_SNORA81	.	ENSMUSG00000088895	ProperStrand	348	1	-8.6141
chr18	36915130	36915357	protein_coding	Ik	exon	ENSMUSG00000024474	ProperStrand	60	chr1	155287317	155287355	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	1	-8.9792
chr7	28146782	28146798	protein_coding	Spnb4	exon	ENSMUSG00000011751	NonProperStrand	84	chr19	8799830	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-4.3020
chr9	113650749	113824324	protein_coding	Clasp2	exon	ENSMUSG00000033392	ProperStrand	30	chr16	23110852	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.0885
chr11	117729369	117729386	protein_coding	Tha1	utr3	ENSMUSG00000017713	NonProperStrand	56	chr10	70061927	70061983	protein_coding	Phyhipl	utr5	ENSMUSG00000037747	ProperStrand	8	1	-17.4684
chr15	84101747	84103941	protein_coding	Parvb	exon	ENSMUSG00000022438	ProperStrand	127	chr1	122123732	122123748	protein_coding	Steap3	utr3	ENSMUSG00000026389	ProperStrand	9	1	-15.7086
chr19	5731528	5731544	protein_coding	Sssca1	exon	ENSMUSG00000079478	ProperStrand	3	chr4	131865860	131865883	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.6896
chr14	64081493	64081513	protein_coding	Fam167a	utr3	ENSMUSG00000035095	ProperStrand	80	chr16	23111723	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.4655
chr11	102294589	102294607	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr10	39978349	39978484	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-1.5246
chr10	12341172	12353751	protein_coding	Utrn	exon	ENSMUSG00000019820	ProperStrand	69	chr7	116664811	116664901	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.3115
chr1	92507589	92508767	protein_coding	Cops8	exon	ENSMUSG00000034432	ProperStrand	9	chr19	8963027	8963061	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.8692
chr6	67222160	67222895	protein_coding	Serbp1	exon	ENSMUSG00000036371	ProperStrand	261	chr12	88778631	88778709	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-3.6687
chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	chr14	26466469	26469199	protein_coding	Zmiz1	exon	ENSMUSG00000007817	ProperStrand	34	1	-10.4149
chr10	77337661	77337677	protein_coding	C330046G03Rik	exon	ENSMUSG00000069581	ProperStrand	4	chr12	17552973	17553092	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	3	-20.0398
chr8	87445161	87445180	protein_coding	Dnase2a	intron	ENSMUSG00000003812	ProperStrand	8	chr4	131865856	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.4974
chr1	6204786	6204850	protein_coding	Rb1cc1	utr5	ENSMUSG00000025907	ProperStrand	13	chr5	130295470	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-8.3148
chr13	23830970	23831019	protein_coding	Hist1h1c	exon	ENSMUSG00000036181	ProperStrand	99	chr13	25354120	25354136	protein_coding	Nrsn1	exon	ENSMUSG00000048978	ProperStrand	24	1	-14.1632
chr8	53422351	53422441	snRNA	ENSMUSG00000064682_U2	.	ENSMUSG00000064682	ProperStrand	55	chr9	120038466	120038551	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.1957
chr5	23825941	23825957	protein_coding	Kcnh2	exon	ENSMUSG00000038319	ProperStrand	242	chr2	158182233	158182297	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-2.4402
chr4	137078010	137078403	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	3	-6.1797
chr8	108233712	108233729	protein_coding	4933405L10Rik	exon	ENSMUSG00000013158	ProperStrand	94	chr3	108357255	108357348	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-3.6936
chr8	126343264	126343281	protein_coding	Rab4a	intron	ENSMUSG00000019478	NonProperStrand	15	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.2332
chr8	130883246	130883262	protein_coding	Nrp1	utr5	ENSMUSG00000025810	ProperStrand	10	chr4	116827119	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-10.6886
chr2	158185529	158185667	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr10	110918549	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	26	-14.9604
chr14	56159294	56159314	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	chr11	6428076	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	5	-7.2521
chr17	66468411	66468427	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	chr8	98270026	98270083	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	3	-6.2439
chr4	116883497	116883520	snRNA	ENSMUSG00000070237_U5	.	ENSMUSG00000070237	ProperStrand	154	chr10	23506297	23506348	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-5.0984
chr2	121368472	121368572	protein_coding	Wdr76	utr3	ENSMUSG00000027242	ProperStrand	25	chr18	35714252	35714283	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-5.1110
chr5	74489226	74489326	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr9	15118527	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	1	-1.9980
chr3	90303295	90303320	protein_coding	2500003M10Rik	utr3	ENSMUSG00000001017	ProperStrand	28	chr8	32260335	32260436	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	2	-9.9730
chr19	3969861	3969877	protein_coding	1700055N04Rik	exon	ENSMUSG00000037263	ProperStrand	6	chr5	130300470	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-16.6440
chr11	71856663	71856763	protein_coding	Fam64a	exon	ENSMUSG00000020808	ProperStrand	7	chr16	24984504	24984520	protein_coding	Lpp	utr3	ENSMUSG00000033306	NonProperStrand	189	2	-20.9496
chr7	135115491	135115705	protein_coding	Fus	exon	ENSMUSG00000030795	ProperStrand	162	chr18	74938045	74938135	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	ProperStrand	1022	1	-5.6867
chr7	52085019	52085073	protein_coding	Nup62	exon	ENSMUSG00000043858	ProperStrand	47	chr3	123210892	123210982	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.4742
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	1	-4.6632
chr2	90235285	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	110918549	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	28	-1.6568
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr2	31529530	31529560	protein_coding	Exosc2	intron	ENSMUSG00000039356	ProperStrand	39	1	-7.8883
chr9	119296099	119296199	protein_coding	Xylb	intron	ENSMUSG00000035769	NonProperStrand	11	chr11	69483136	69483199	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-5.6603
chr10	84102509	84102538	protein_coding	Polr3b	exon	ENSMUSG00000034453	ProperStrand	41	chrX	34622906	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	3	-9.5214
chr4	43505657	43505930	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr11	62416949	62417020	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	15	-1.3763
chr19	10693613	10693773	protein_coding	Ddb1	exon	ENSMUSG00000024740	ProperStrand	304	chr17	24665479	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	5	-9.8776
chr8	73436912	73436950	protein_coding	Mtap1s	exon	ENSMUSG00000019261	ProperStrand	60	chr7	116663634	116663724	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-6.6366
chr6	136762873	136762946	protein_coding	Wbp11	exon	ENSMUSG00000030216	ProperStrand	87	chr17	35087894	35087944	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	4	-14.2200
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr10	90581034	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	3	-5.8690
chr6	45965480	46120177	protein_coding	Cntnap2	exon	ENSMUSG00000039419	NonProperStrand	283	chr1	162966189	162966269	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-4.5407
chrX	155990018	155990098	protein_coding	A830080D01Rik	exon	ENSMUSG00000044150	ProperStrand	102	chr5	39063722	39063812	protein_coding	Zfp518b	exon	ENSMUSG00000046572	ProperStrand	95	73	-19.9791
chr15	18774742	18774758	protein_coding	Cdh10	intron	ENSMUSG00000022321	NonProperStrand	9	chr8	11728537	11728554	protein_coding	Arhgef7	intron	ENSMUSG00000031511	ProperStrand	38	1	-17.7863
chr16	36088343	36088424	protein_coding	Ccdc58	intron	ENSMUSG00000075229	ProperStrand	18	chr4	131908256	131908346	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.4481
chr7	134176525	134176594	protein_coding	Kif22	intron	ENSMUSG00000030677	ProperStrand	63	chr3	68889026	68889126	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-3.1685
chr16	20680839	20681027	protein_coding	Eif4g1	exon	ENSMUSG00000045983	ProperStrand	199	chr2	144087324	144087376	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-4.2199
chr17	26070069	26070185	protein_coding	Pigq	intron	ENSMUSG00000025728	ProperStrand	26	chr7	117190023	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	5	-19.7893
chr18	10052129	10052153	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr11	62416593	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-1.2448
chr8	86777954	86777971	protein_coding	Mri1	exon	ENSMUSG00000004996	ProperStrand	9	chr16	23110454	23110518	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-6.0870
chr5	57047032	57047053	LINE	Lx6	L1	chr5Lx657046946	ProperStrand	1	chr1	88247745	88247835	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-inf
chr15	77356785	77356801	protein_coding	Apol7c	exon	ENSMUSG00000044309	ProperStrand	197	chr9	15119647	15119682	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-0.8569
chr10	74707891	74707953	protein_coding	Specc1l	exon	ENSMUSG00000033444	ProperStrand	36	chr18	35716803	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.0537
chr1	155287326	155287354	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	chr10	41994731	41994831	protein_coding	Foxo3	exon	ENSMUSG00000048756	ProperStrand	59	1	-9.0129
chr13	95241702	95241729	protein_coding	Ap3b1	exon	ENSMUSG00000021686	ProperStrand	96	chr4	140755894	140755988	protein_coding	Fbxo42	exon	ENSMUSG00000028920	ProperStrand	91	1	-11.5316
chr11	6519810	6519900	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	chrX	71517823	71517903	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-1.6396
chr8	64017614	64028377	protein_coding	Palld	exon	ENSMUSG00000058056	NonProperStrand	125	chr19	8800361	8800451	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-2.2388
chr10	76721512	76721528	protein_coding	Gm10941	utr3	ENSMUSG00000078444	ProperStrand	8	chr11	69481427	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-7.1653
chr1	123203835	123203855	protein_coding	Insig2	exon	ENSMUSG00000003721	ProperStrand	4	chr8	84531362	84531379	protein_coding	Inpp4b	intron	ENSMUSG00000037940	NonProperStrand	33	1	-19.0852
chr17	75690723	75690739	protein_coding	Ltbp1	exon	ENSMUSG00000001870	ProperStrand	136	chr1	78663659	78663676	protein_coding	Utp14b	utr3	ENSMUSG00000079470	ProperStrand	8	1	-15.7878
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chrX	71268736	71268752	protein_coding	Irak1	exon	ENSMUSG00000031392	NonProperStrand	18	1	-8.3164
chr4	34554381	34554398	protein_coding	Orc3	exon	ENSMUSG00000040044	ProperStrand	10	chr1	162967489	162967556	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	3	-16.2257
chr11	74650072	74650189	protein_coding	Mnt	exon	ENSMUSG00000000282	ProperStrand	56	chr11	6520321	6520364	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	1	-7.8552
chr9	78023109	78023166	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr17	46963048	46966886	protein_coding	BC032203	exon	ENSMUSG00000036568	ProperStrand	64	1	-5.7511
chr6	24531435	24531457	LTR	ORR1B1-int	MaLR	chr6ORR1B1-int24531329	NonProperStrand	2	chr1	64778695	64778795	protein_coding	Fzd5	utr3	ENSMUSG00000045005	ProperStrand	175	1	-18.4314
chr10	127999883	127999973	protein_coding	Pa2g4	exon	ENSMUSG00000025364	ProperStrand	72	chr12	60141367	60141447	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-6.4681
chr8	73120170	73120218	protein_coding	Isyna1	exon	ENSMUSG00000019139	ProperStrand	15	chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	1	-11.3190
chr5	116032293	116032383	protein_coding	Gcn1l1	exon	ENSMUSG00000041638	ProperStrand	408	chr1	145626114	145626194	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-5.0473
chr9	44221694	44225221	protein_coding	Ccdc84	exon	ENSMUSG00000043923	ProperStrand	3	chr2	26768387	26768418	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-11.9253
mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr7	25082713	25082730	protein_coding	Zfp61	utr5	ENSMUSG00000050605	ProperStrand	6	1	-10.6285
chr7	135587348	135587405	protein_coding	Tial1	exon	ENSMUSG00000030846	ProperStrand	25	chr15	34370545	34370619	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-5.2232
chr16	4085150	4085248	protein_coding	Crebbp	exon	ENSMUSG00000022521	ProperStrand	56	chr12	110894596	110894623	snoRNA	ENSMUSG00000064417_SNORD113	.	ENSMUSG00000064417	ProperStrand	16	3	-20.5641
chr11	97641452	97641483	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	chr12	85350690	85350758	protein_coding	Acot1	utr5	ENSMUSG00000072949	ProperStrand	72	3	-16.7811
chr19	7453103	7453163	protein_coding	AI846148	intron	ENSMUSG00000024970	ProperStrand	17	chr9	120038589	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.4412
chr10	62407675	62407712	protein_coding	Slc25a16	utr3	ENSMUSG00000071253	ProperStrand	1	chr1	162965996	162966041	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-inf
chr5	109124122	109132306	protein_coding	Fgfrl1	exon	ENSMUSG00000008090	ProperStrand	111	chr13	59553587	59553618	protein_coding	Agtpbp1	intron	ENSMUSG00000021557	ProperStrand	35	1	-13.1665
chr11	22896419	22897045	protein_coding	Cct4	exon	ENSMUSG00000007739	ProperStrand	81	chr4	64785646	64785662	protein_coding	Pappa	exon	ENSMUSG00000028370	ProperStrand	65	1	-12.5493
chr10	82322042	82323329	protein_coding	Txnrd1	utr5	ENSMUSG00000020250	ProperStrand	47	chr16	4886395	4886411	protein_coding	Mgrn1	exon	ENSMUSG00000022517	NonProperStrand	157	1	-11.8759
chr7	117918545	117918561	protein_coding	Ampd3	intron	ENSMUSG00000005686	NonProperStrand	6	chr7	105851792	105851867	protein_coding	Prkrir	utr5	ENSMUSG00000030753	ProperStrand	12	1	-20.1124
chr14	102333763	102333796	protein_coding	Lmo7	utr3	ENSMUSG00000033060	ProperStrand	16	chr2	5332847	5332870	protein_coding	Camk1d	intron	ENSMUSG00000039145	ProperStrand	50	1	-16.3661
chr10	62228322	62228388	snoRNA	ENSMUSG00000080469_Snord98	.	ENSMUSG00000080469	ProperStrand	124	chr8	32260335	32260422	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	6	-17.2020
chr7	103398056	103398146	protein_coding	Odz4	intron	ENSMUSG00000048078	ProperStrand	93	chr11	69483237	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-3.1961
chr9	120038002	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	chr16	38158126	38158226	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	1	-0.8468
chr7	91258331	91258347	protein_coding	Fam108c	utr3	ENSMUSG00000038459	NonProperStrand	65	chr5	108334206	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-4.6659
chr12	92812019	92812069	protein_coding	Gtf2a1	intron	ENSMUSG00000020962	ProperStrand	61	chr5	108334247	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-4.7881
chrX	96331533	96331549	protein_coding	Efnb1	utr5	ENSMUSG00000031217	ProperStrand	1	chr5	108336363	108336406	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-inf
chr13	23647404	23647458	protein_coding	Hist1h1d	exon	ENSMUSG00000052565	ProperStrand	78	chr5	111121085	111121185	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	2	-9.6293
chr1	152270735	152270753	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	chr2	145077958	145209256	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-3.4665
chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	chr18	73693113	73693134	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-1.7027
chr18	24363855	24363872	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr3	153991597	153991614	protein_coding	Lhx8	utr5	ENSMUSG00000093486	NonProperStrand	47	1	-11.8630
chr10	60226905	60226964	protein_coding	Unc5b	utr3	ENSMUSG00000020099	ProperStrand	25	chr11	76073902	76073921	protein_coding	Nxn	intron	ENSMUSG00000020844	ProperStrand	20	1	-17.2448
chr11	7067186	7069426	protein_coding	Adcy1	exon	ENSMUSG00000020431	ProperStrand	183	chr2	22444694	22444814	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-5.5749
chr8	74008400	74008417	protein_coding	Ano8	exon	ENSMUSG00000034863	NonProperStrand	171	chr11	68886975	68887059	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-2.2668
chr15	82980098	82980225	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr2	26768370	26768433	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	2	-1.1588
chr2	163550672	163550728	protein_coding	Pkig	intron	ENSMUSG00000035268	NonProperStrand	4	chr18	35716810	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-12.5455
chr5	136611800	136611816	protein_coding	Lrwd1	exon	ENSMUSG00000029703	NonProperStrand	51	chr9	120039623	120039641	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.6175
chr6	38541377	38541417	protein_coding	Luc7l2	exon	ENSMUSG00000029823	ProperStrand	85	chr8	98269958	98270077	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	2	-8.0357
chr16	32247670	32247688	protein_coding-noncoding	Wdr53	utr5	ENSMUSG00000022787	NonProperStrand	2	chr19	8798740	8798783	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-12.1939
chr15	10504979	10504995	protein_coding	Rai14	exon	ENSMUSG00000022246	ProperStrand	180	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-8.2302
chr13	78303763	78303794	protein_coding	Fam172a	utr3	ENSMUSG00000064138	ProperStrand	17	chr7	118219574	118219641	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-10.8042
chr5	123622050	123622066	protein_coding	Hpd	exon	ENSMUSG00000029445	ProperStrand	254	chr16	90386836	90386853	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	1	-9.3170
chrX	71517859	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	chr16	20684353	20684387	snoRNA	ENSMUSG00000077239_Snord66	.	ENSMUSG00000077239	ProperStrand	159	1	-4.6459
chr11	53185921	53186011	protein_coding	Aff4	exon	ENSMUSG00000049470	ProperStrand	94	chr17	24857740	24857820	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	11	-18.8136
chr9	64906101	64906124	protein_coding	Dpp8	intron	ENSMUSG00000032393	ProperStrand	31	chr2	32059824	32061901	protein_coding	Prrc2b	exon	ENSMUSG00000039262	ProperStrand	344	1	-11.1474
chr14	49278581	49278631	protein_coding	Otx2	exon	ENSMUSG00000021848	ProperStrand	19	chr11	69481336	69481426	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.3947
chr17	24665421	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	chr4	131865383	131865504	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	14	-0.8466
chr12	113040289	113040389	protein_coding	Klc1	intron	ENSMUSG00000021288	ProperStrand	35	chr11	100325033	100325102	protein_coding	Klhl11	exon	ENSMUSG00000048732	ProperStrand	8	1	-17.9876
chr6	115742094	115742110	protein_coding	Cand2	exon	ENSMUSG00000030319	NonProperStrand	21	chr19	8798484	8798524	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-7.2962
chrX	71194691	71211545	protein_coding	Hcfc1	utr5	ENSMUSG00000031386	ProperStrand	424	chr9	120038558	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	8	-6.9217
chr5	87246165	87246239	protein_coding	Ythdc1	exon	ENSMUSG00000035851	ProperStrand	45	chr17	24665416	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-5.5010
chr5	152212108	152212126	lincRNA	1700028E10Rik	intron	ENSMUSG00000087548	ProperStrand	53	chr4	131865940	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.9636
chr15	78982035	78982051	protein_coding	Polr2f	exon	ENSMUSG00000033020	NonProperStrand	71	chr2	26494792	26494825	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.8075
chr6	100184037	100184055	protein_coding	Rybp	intron	ENSMUSG00000072872	NonProperStrand	7	chr4	131908709	131908802	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.0493
chr15	98604924	98606960	protein_coding	Wnt10b	exon	ENSMUSG00000022996	NonProperStrand	189	chr1	64777568	64777600	protein_coding	Fzd5	utr3	ENSMUSG00000045005	ProperStrand	175	1	-8.8671
chr11	68032058	68032148	protein_coding	Ntn1	intron	ENSMUSG00000020902	ProperStrand	44	chr17	35299560	35299640	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	6	-inf
chr12	13226132	13226222	protein_coding	Ddx1	utr3	ENSMUSG00000037149	ProperStrand	47	chr9	15119336	15119416	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-5.5853
chr4	41082996	41083086	protein_coding	Ube2r2	utr5	ENSMUSG00000036241	ProperStrand	19	chr8	73419703	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-5.3188
chr5	87354839	87354855	protein_coding	Ugt2b1	exon	ENSMUSG00000035836	ProperStrand	26	chr2	103880824	103880900	snoRNA	ENSMUSG00000087739_SCARNA21	.	ENSMUSG00000087739	ProperStrand	50	1	-15.3661
chr19	10702306	10702349	protein_coding	Ddb1	utr3	ENSMUSG00000024740	ProperStrand	304	chr7	25670177	25670523	protein_coding	Rps19	exon	ENSMUSG00000040952	ProperStrand	101	1	-9.0172
chr1	165983749	165983765	protein_coding	Sele	exon	ENSMUSG00000026582	NonProperStrand	31	chr16	23110530	23110559	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.6461
chr17	78957530	78957610	protein_coding	Vit	intron	ENSMUSG00000024076	ProperStrand	4	chr1	11856173	11856263	protein_coding	A830018L16Rik	intron	ENSMUSG00000057715	ProperStrand	7	1	-inf
chr6	96322858	96322874	protein_coding	Fam19a1	intron	ENSMUSG00000059187	NonProperStrand	60	chr1	102370779	102370801	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	ProperStrand	5	1	-18.2404
chr18	31951622	31954962	protein_coding	Polr2d	exon	ENSMUSG00000024258	ProperStrand	8	chr4	131865452	131865493	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	4	-21.5947
chr7	150251915	150252176	protein_coding	Cd81	exon	ENSMUSG00000037706	ProperStrand	88	chr19	8963027	8963080	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.6633
chr2	102926980	102926997	protein_coding	Apip	intron	ENSMUSG00000010911	NonProperStrand	26	chr7	150717369	150717426	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-7.1665
chr5	53225473	53225528	protein_coding	Anapc4	utr5	ENSMUSG00000029176	ProperStrand	11	chr10	87892264	87892280	protein_coding	Gnptab	exon	ENSMUSG00000035311	ProperStrand	65	1	-16.6257
chr2	27281841	27281857	protein_coding	Vav2	exon	ENSMUSG00000009621	NonProperStrand	31	chr11	62418015	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-6.8646
chr16	44160648	44160731	protein_coding	Naa50	utr3	ENSMUSG00000022698	ProperStrand	56	chr7	52382755	52382789	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	4	-18.8959
chr17	85116044	85122041	protein_coding	Lrpprc	exon	ENSMUSG00000024120	ProperStrand	98	chr2	31924012	31924028	protein_coding	Fam78a	utr3	ENSMUSG00000050592	NonProperStrand	340	1	-8.8545
chr8	32270220	32270252	protein_coding	Mak16	utr3	ENSMUSG00000031578	ProperStrand	26	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-8.5710
chr16	95695324	95695345	protein_coding	Erg	intron	ENSMUSG00000040732	NonProperStrand	5	chr17	24665421	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-10.0405
chr19	46789845	46789935	protein_coding	As3mt	intron	ENSMUSG00000003559	ProperStrand	10	chr17	24857735	24857815	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-5.6778
chr9	95553119	95553137	protein_coding	Pcolce2	intron	ENSMUSG00000015354	NonProperStrand	9	chr10	90432659	90432677	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	1	-14.4973
chr11	97639402	97639446	protein_coding	Rpl23	exon	ENSMUSG00000071415	ProperStrand	920	chr2	26768098	26768118	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	1	-3.1208
chr11	119708218	119708236	protein_coding	Rptor	exon	ENSMUSG00000025583	ProperStrand	76	chr1	162965980	162966003	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-3.1713
chr16	16323855	16324068	protein_coding	Dnm1l	exon	ENSMUSG00000022789	NonProperStrand	38	chr15	34370545	34370667	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	4	-14.1470
chr4	135846171	135846187	protein_coding	Zfp46	exon	ENSMUSG00000051351	NonProperStrand	85	chr4	131865381	131865456	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-3.3567
chr7	117189864	117189944	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chrX	71517861	71517951	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	4	-3.0431
chr10	104915081	104915097	protein_coding	Tmtc2	intron	ENSMUSG00000036019	ProperStrand	72	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-8.5614
chr11	57857547	57872877	protein_coding	Larp1	exon	ENSMUSG00000037331	ProperStrand	201	chr11	6428065	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-2.3690
chr19	8800486	8800555	lincRNA	Snhg1	exon	ENSMUSG00000090867	ProperStrand	100	chr10	90581049	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	5	-15.8830
chr2	28325035	28325105	protein_coding	Mrps2	exon	ENSMUSG00000035772	ProperStrand	8	chr9	106332335	106332665	protein_coding	Rpl29	exon	ENSMUSG00000048758	ProperStrand	45	1	-17.8233
chrX	72214248	72214264	protein_coding-noncoding	Gab3	utr3	ENSMUSG00000032750	ProperStrand	420	chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	3	-9.5990
chr11	70796246	70796319	protein_coding	C1qbp	exon	ENSMUSG00000018446	ProperStrand	46	chr2	26493366	26493449	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-4.2428
chr15	74419643	74419685	protein_coding	Bai1	utr3	ENSMUSG00000034730	ProperStrand	22	chr4	56910531	56910628	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	2	-12.9891
chr16	34986602	34986619	protein_coding	Mylk	exon	ENSMUSG00000022836	NonProperStrand	56	chr12	13226212	13226342	protein_coding	Ddx1	utr3	ENSMUSG00000037149	ProperStrand	47	2	-inf
chr5	77697510	77697530	protein_coding	Rest	exon	ENSMUSG00000029249	ProperStrand	136	chr10	112365767	112365847	protein_coding	Atxn7l3b	utr5	ENSMUSG00000074748	ProperStrand	18	1	-14.1114
chr14	87659491	87659512	LTR	MTEa	MaLR	chr14MTEa87659331	NonProperStrand	83	chr19	8799581	8799600	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-6.1254
chr14	80262508	80262524	lincRNA	Gm6999	intron	ENSMUSG00000075495	ProperStrand	265	chr3	86930706	86966090	protein_coding	Kirrel	intron	ENSMUSG00000041734	ProperStrand	22	8	-21.5674
chr18	42805538	42805554	protein_coding	Ppp2r2b	exon	ENSMUSG00000024500	NonProperStrand	95	chr11	53213632	53213701	protein_coding	Aff4	exon	ENSMUSG00000049470	ProperStrand	94	1	-11.4874
chr1	108496590	108496607	protein_coding	Bcl2	intron	ENSMUSG00000057329	NonProperStrand	9	chr8	98269989	98270085	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-9.3848
chr6	136758178	136758195	protein_coding	H2afj	utr3	ENSMUSG00000060032	ProperStrand	25	chr11	62418014	62418041	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-7.2968
chrX	100517086	100517102	protein_coding	Cdx4	exon	ENSMUSG00000031326	NonProperStrand	30	chr18	35716830	35716865	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.3863
chr7	105024198	105024222	protein_coding	Pak1	intron	ENSMUSG00000030774	ProperStrand	13	chr1	172975161	172975189	tRNA	tRNA699-GlyGCC	.	1467129	ProperStrand	660	2	-18.8145
chr11	83223225	83223246	protein_coding	Rasl10b	utr5	ENSMUSG00000020684	ProperStrand	6	chrX	67617971	67618008	protein_coding	Ids	exon	ENSMUSG00000035847	ProperStrand	1	1	-inf
chr8	112350500	112350553	protein_coding	Ap1g1	exon	ENSMUSG00000031731	ProperStrand	22	chr18	73693167	73693191	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-7.5214
chr2	26493366	26493490	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr17	35089181	35089258	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	12	-0.8219
chr6	39730884	39730902	SINE	PB1D7	Alu	chr6PB1D739730824	ProperStrand	1	mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	1	-inf
chr4	131826016	131826099	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	chr2	26493365	26493483	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	4	-3.2606
chr1	88199936	88200007	protein_coding	B3gnt7	utr5	ENSMUSG00000079445	ProperStrand	13	chr16	23110548	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.3353
chr14	63190654	63200722	protein_coding	Fam124a	intron	ENSMUSG00000035184	ProperStrand	14	chr2	26494767	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-9.7071
chr15	99822169	99822240	protein_coding	Larp4	exon	ENSMUSG00000023025	ProperStrand	41	chr7	133726521	133726538	protein_coding	Cln3	exon	ENSMUSG00000030720	ProperStrand	87	1	-13.3360
chr2	43110993	43111010	LINE	Lx6	L1	chr2Lx643110257	ProperStrand	35	chr8	11550595	11550640	protein_coding	Cars2	exon	ENSMUSG00000056228	ProperStrand	17	1	-16.9834
chr3	107991704	107991720	protein_coding	Amigo1	utr3	ENSMUSG00000050947	ProperStrand	22	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-9.7632
chr10	85487452	85491808	protein_coding	Fbxo7	exon	ENSMUSG00000001786	ProperStrand	13	chr3	96654255	96654271	protein_coding	Pdzk1	exon	ENSMUSG00000038298	ProperStrand	101	1	-15.3990
chr15	79783703	79783793	protein_coding	Cbx7	intron	ENSMUSG00000053411	ProperStrand	62	chr4	131908805	131908885	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.1795
chr8	81230225	81230266	protein_coding	Slc10a7	intron	ENSMUSG00000031684	ProperStrand	55	chr10	41644311	41644329	protein_coding	Armc2	exon	ENSMUSG00000071324	ProperStrand	281	1	-10.3936
chr11	115940191	115940237	protein_coding	Wbp2	utr3	ENSMUSG00000034341	ProperStrand	39	chr14	13338419	13338435	protein_coding	Cadps	exon	ENSMUSG00000054423	ProperStrand	32	1	-15.4348
chr3	90684732	90684822	LINE	L1Md_F2	L1	chr3L1Md_F290684683	NonProperStrand	1	chr3	90684590	90684680	LINE	L1_Mur1	L1	chr3L1_Mur190683698	NonProperStrand	1	1	-inf
chr7	54110466	54110556	protein_coding	Ldha	utr3	ENSMUSG00000063229	ProperStrand	280	chr13	51743578	51743658	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-3.8792
chr11	97031315	97032846	protein_coding	Kpnb1	exon	ENSMUSG00000001440	ProperStrand	197	chr4	132394296	132394325	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	1	-6.7708
chr1	106562687	106562777	LINE	L1Md_F2	L1	chr1L1Md_F2106561316	NonProperStrand	1	chr1	49597625	49597705	LINE	L1_Mus2	L1	chr1L1_Mus249597193	NonProperStrand	1	1	-inf
chr7	125986529	125986619	protein_coding	2310008H09Rik	utr3	ENSMUSG00000030980	ProperStrand	42	chr10	90581069	90581149	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-5.5012
chr5	100855944	100855974	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr1	162968447	162968512	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	2	-1.1427
chr14	76372336	76372426	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	chr1	9932549	9932625	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-3.5479
chr11	102149127	102149406	protein_coding	Tmub2	exon	ENSMUSG00000034757	ProperStrand	9	chrX	34622932	34623022	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	5	-inf
chr6	89287230	89287246	protein_coding	Plxna1	exon	ENSMUSG00000030084	NonProperStrand	19	chr2	158182201	158182278	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	3	-16.5703
chr4	123170494	123171189	protein_coding	Macf1	exon	ENSMUSG00000028649	ProperStrand	320	chr18	73693171	73693187	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-2.4239
chr7	30972314	30972374	protein_coding	Capns1	utr3	ENSMUSG00000001794	ProperStrand	35	chr7	38354919	38354935	protein_coding	Zfp536	exon	ENSMUSG00000043456	NonProperStrand	236	1	-11.6553
chr15	88930447	88930465	protein_coding	1300018J18Rik	utr3	ENSMUSG00000035757	ProperStrand	7	chr18	33954888	33954948	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-7.7828
chr2	90235313	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr12	82825859	82826720	protein_coding	Map3k9	exon	ENSMUSG00000042724	ProperStrand	92	1	-3.6583
chr4	136501868	136501885	protein_coding	Epha8	exon	ENSMUSG00000028661	ProperStrand	13	chr5	123622050	123622066	protein_coding	Hpd	exon	ENSMUSG00000029445	ProperStrand	254	1	-13.5368
chr12	73909512	73909602	LTR	ORR1B1	MaLR	chr12ORR1B173909475	ProperStrand	1	chr12	73909814	73909904	LTR	RMER6C	ERVK	chr12RMER6C73909756	NonProperStrand	1	1	-inf
chr15	98918002	98918081	protein_coding	C1ql4	exon	ENSMUSG00000001076	ProperStrand	2	chr2	132077435	132077457	protein_coding	Pcna	exon	ENSMUSG00000027342	ProperStrand	25	2	-inf
chr4	82114659	82114675	protein_coding	Nfib	intron	ENSMUSG00000008575	ProperStrand	50	chr16	23111734	23111755	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.1991
chr1	63225275	63225318	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	chr19	8963032	8963048	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-5.7155
chr13	13582403	13591930	protein_coding	Nid1	exon	ENSMUSG00000005397	ProperStrand	112	chr17	79115052	79115070	protein_coding	Strn	intron	ENSMUSG00000024077	ProperStrand	8	1	-16.1713
chr17	24555453	24555514	protein_coding	Rnps1	exon	ENSMUSG00000034681	ProperStrand	40	chr6	125136375	125136442	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	3	-16.3165
chr11	51415354	51416147	protein_coding	Hnrnpab	exon	ENSMUSG00000020358	ProperStrand	124	chr4	131865919	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.7856
chr2	26767737	26767769	protein_coding-noncoding	Rpl7a	utr5	ENSMUSG00000062647	ProperStrand	53	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	3	-9.3944
chr11	97489600	97489617	protein_coding	E130012A19Rik	exon	ENSMUSG00000043439	NonProperStrand	110	chr7	118219704	118219740	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-3.0529
chr6	82021320	82021339	protein_coding	Fam176a	intron	ENSMUSG00000035104	ProperStrand	64	chr10	127552098	127553167	protein_coding	Baz2a	exon	ENSMUSG00000040054	ProperStrand	274	1	-10.1391
chr3	98118212	98118302	protein_coding	Phgdh	exon	ENSMUSG00000053398	ProperStrand	46	chr10	23505156	23505270	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	8	-16.0158
chr9	78327264	78328372	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chrX	99445995	99446012	protein_coding	Cited1	utr5	ENSMUSG00000051159	ProperStrand	72	2	-9.7178
chr5	36449301	36449319	protein_coding	Sorcs2	intron	ENSMUSG00000029093	ProperStrand	21	chr18	35714179	35714269	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-5.4554
chr5	108258984	108259059	protein_coding	Evi5	intron	ENSMUSG00000011831	ProperStrand	18	chr10	6063958	6063977	protein_coding	Akap12	intron	ENSMUSG00000038587	ProperStrand	1008	3	-19.4436
chr13	32934969	32934993	protein_coding	Serpinb1a	exon	ENSMUSG00000044734	ProperStrand	4	chr14	76247716	76247842	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	4	-inf
chr16	23110455	23110526	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	chr5	23358051	23358097	snoRNA	ENSMUSG00000093321_Snord93	.	ENSMUSG00000093321	ProperStrand	218	3	-2.2793
chr5	74489211	74489563	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr9	120039533	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	20	-2.8996
chr8	4243756	4243846	protein_coding	Map2k7	exon	ENSMUSG00000002948	ProperStrand	32	chr7	148634708	148634788	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-5.1944
chr15	76257952	76257984	protein_coding	Heatr7a	exon	ENSMUSG00000022558	ProperStrand	48	chr7	117190023	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.7442
chrX	34589398	34589415	protein_coding	Sowahd	exon	ENSMUSG00000044400	ProperStrand	26	chr4	116826699	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-8.4580
chr7	109059673	109059753	protein_coding	2400001E08Rik	intron	ENSMUSG00000030842	ProperStrand	18	chr16	23111738	23111828	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.0433
chr16	23110543	23110590	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr12	52515854	52515870	protein_coding	Scfd1	utr3	ENSMUSG00000020952	ProperStrand	10	1	-12.6762
chr8	13416896	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr4	36354419	36354439	protein_coding	Lingo2	intron	ENSMUSG00000045083	ProperStrand	17	1	-8.9928
chr13	17973053	17973111	protein_coding	Rala	utr3	ENSMUSG00000008859	ProperStrand	15	chr16	23110852	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	7	-16.9604
chr10	56107717	56108334	protein_coding	Gja1	exon	ENSMUSG00000050953	ProperStrand	70	chr1	39605591	39605656	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	20	-inf
chr4	107850316	107850384	protein_coding	Echdc2	intron	ENSMUSG00000028601	NonProperStrand	12	chr16	23111777	23111834	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	6	-inf
chr11	17121461	17121504	protein_coding	Wdr92	intron	ENSMUSG00000078970	ProperStrand	8	chr1	162967489	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	4	-19.0212
chr17	85025843	85025865	protein_coding	Dync2li1	utr5	ENSMUSG00000024253	ProperStrand	2	chr4	131908236	131908336	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-inf
chr2	26768566	26768753	protein_coding	Rpl7a	exon	ENSMUSG00000062647	ProperStrand	234	chr4	131865377	131865467	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-1.6491
chr1	88246054	88246086	protein_coding	Ncl	utr3	ENSMUSG00000026234	ProperStrand	1184	chr6	94776857	94776876	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	1	-3.3064
chr16	65089940	65089959	protein_coding	Htr1f	intron	ENSMUSG00000050783	NonProperStrand	10	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-11.3948
chr15	102058029	102062294	protein_coding	Itgb7	utr5	ENSMUSG00000001281	NonProperStrand	9	chr4	131865867	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.2544
chr14	71070966	71070986	protein_coding	Xpo7	exon	ENSMUSG00000022100	ProperStrand	109	chr8	13876160	13876226	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	2	-9.6947
chr7	30798893	30807845	protein_coding	Zfp568	exon	ENSMUSG00000074221	ProperStrand	110	chr16	23110920	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	11	-6.2503
chr19	46728484	46728574	protein_coding	D19Wsu162e	exon	ENSMUSG00000047731	ProperStrand	16	chr7	52381762	52381805	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-10.2494
chr8	87223594	87223610	protein_coding	Trmt1	exon	ENSMUSG00000001909	NonProperStrand	60	chr11	97642952	97643077	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.4717
chr1	89673653	89673753	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	chr1	161270527	161270554	snoRNA	ENSMUSG00000089536_Scarna3a	.	ENSMUSG00000089536	ProperStrand	247	1	-1.0172
chr13	40982775	40982792	protein_coding	Gcnt2	exon	ENSMUSG00000021360	ProperStrand	31	chr4	118898975	118899037	protein_coding	AU022252	exon	ENSMUSG00000078584	ProperStrand	6	1	-18.6658
chr11	55296234	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	chr4	122970485	122970526	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-1.0136
chr9	96233399	96233489	protein_coding	Atp1b3	utr3	ENSMUSG00000032412	ProperStrand	20	chr16	23111373	23111453	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.0472
chr3	82816757	82816774	protein_coding	Fgg	exon	ENSMUSG00000033860	NonProperStrand	321	chr17	35299510	35299642	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-1.7914
chr12	110888870	110888907	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr9	15118268	15118358	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	3	-1.1732
chr10	90076969	90076990	protein_coding	Anks1b	intron	ENSMUSG00000058589	NonProperStrand	230	chr11	69482352	69482399	snoRNA	ENSMUSG00000089542_snoU6-77	.	ENSMUSG00000089542	ProperStrand	138	1	-8.9496
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr17	84586050	84586067	protein_coding	Zfp36l2	exon	ENSMUSG00000045817	ProperStrand	16	1	-11.2746
chr10	51865578	51865594	protein_coding	Ros1	exon	ENSMUSG00000019893	NonProperStrand	15	chr18	35714191	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	3	-14.3148
chr7	115258029	115258046	LINE	L1_Mus2	L1	chr7L1_Mus2115256645	ProperStrand	12	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-6.3129
chr14	71026645	71026682	protein_coding	Epb4.9	utr5	ENSMUSG00000022099	ProperStrand	48	chr16	23110828	23110872	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-3.0713
chr11	48615203	48615252	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	2	-8.4271
chr2	167307494	167307584	protein_coding	Spata2	utr3	ENSMUSG00000047030	NonProperStrand	6	chr19	60288550	60288602	protein_coding	D19Ertd737e	intron	ENSMUSG00000057858	ProperStrand	3	1	-inf
chr6	91441292	91442270	protein_coding	Xpc	exon	ENSMUSG00000030094	ProperStrand	19	chr16	23111389	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.1411
chr2	120796304	120796321	protein_coding	Ubr1	exon	ENSMUSG00000027272	ProperStrand	16	chrX	153988860	153988906	protein_coding	Mbtps2	exon	ENSMUSG00000046873	ProperStrand	7	1	-inf
chr9	41852100	41927871	protein_coding	Sorl1	exon	ENSMUSG00000049313	ProperStrand	112	chr2	158182200	158182291	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	4	-12.4753
chr9	106114189	106114602	protein_coding	Twf2	exon	ENSMUSG00000023277	ProperStrand	10	chr4	53873618	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	1	-12.7076
chr7	99889464	99889554	lincRNA	4632427E13Rik	exon	ENSMUSG00000074024	ProperStrand	5	chr17	47881192	47881272	protein_coding	Tfeb	intron	ENSMUSG00000023990	ProperStrand	78	1	-17.9570
chr4	117884341	117884431	protein_coding	Ptprf	exon	ENSMUSG00000033295	ProperStrand	337	chr17	71980621	71980701	snoRNA	ENSMUSG00000093289_Snord92	.	ENSMUSG00000093289	ProperStrand	56	1	-9.9943
chr11	118900007	118900023	protein_coding	Cbx8	exon	ENSMUSG00000025578	ProperStrand	95	chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	1	-7.9210
chr14	31362528	31362547	protein_coding	Tkt	exon	ENSMUSG00000021957	ProperStrand	160	chr4	140723745	140723761	protein_coding	Fbxo42	exon	ENSMUSG00000028920	ProperStrand	91	1	-10.5082
chr6	87041084	87041161	protein_coding	Gfpt1	utr3	ENSMUSG00000029992	ProperStrand	22	chr2	22444575	22444595	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	2	-15.5084
chr1	173433177	173433267	protein_coding	B930036N10Rik	utr3	ENSMUSG00000091993	ProperStrand	150	chr10	107800720	107800800	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	4	-19.2085
chr11	118305719	118305735	protein_coding	C1qtnf1	intron	ENSMUSG00000017446	ProperStrand	52	chr16	23111448	23111487	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.4615
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	4	-9.7879
chr11	62198326	62203220	protein_coding	Ncor1	exon	ENSMUSG00000018501	ProperStrand	132	chr2	145076803	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-6.1614
chr10	90555986	90558613	protein_coding	Ikbip	exon	ENSMUSG00000019975	ProperStrand	12	chr7	116663732	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-5.5543
chr13	19462123	19462143	protein_coding	Stard3nl	exon	ENSMUSG00000003062	ProperStrand	8	chr15	34370581	34370681	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-7.5453
chr7	36578739	36578829	protein_coding	Zfp507	exon	ENSMUSG00000044452	ProperStrand	66	chr4	131908715	131908795	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.0969
chr10	77079401	77079419	protein_coding	Sumo3	exon	ENSMUSG00000020265	ProperStrand	31	chr19	8798485	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	4	-18.5484
chr15	77356785	77356801	protein_coding	Apol7c	exon	ENSMUSG00000044309	ProperStrand	197	chr15	79908929	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-3.2258
chr1	88423336	88423436	protein_coding	Ptma	utr5	ENSMUSG00000026238	ProperStrand	385	chr6	71832634	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-2.1906
chr8	127317792	127317808	protein_coding	Trim67	utr5	ENSMUSG00000036913	ProperStrand	43	chr19	9044409	9044456	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	1	-10.1351
chr19	34901901	34901918	protein_coding	Pank1	intron	ENSMUSG00000033610	NonProperStrand	12	chr11	69730717	69730748	protein_coding	Eif5a	utr3	ENSMUSG00000078812	ProperStrand	164	1	-14.5827
chr2	163454889	163454950	protein_coding	Serinc3	exon	ENSMUSG00000017707	ProperStrand	28	chr9	120038590	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-7.4583
chr6	87863894	87863912	lincRNA	Gm16723	intron	ENSMUSG00000085703	ProperStrand	13	chr1	152268927	152269668	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	1	-12.0215
chr2	125499562	125499578	protein_coding	Eid1	utr3	ENSMUSG00000091337	ProperStrand	60	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.2762
chr15	5067670	5068623	protein_coding	Rpl37	exon	ENSMUSG00000041841	ProperStrand	69	chr19	8963096	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.0449
chr16	23110527	23110580	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	chr11	68937794	68937820	tRNA	tRNA401-LeuTAG	.	1308628	ProperStrand	8	2	-10.4541
chr6	83643413	83643433	antisense	Vax2os2	.	ENSMUSG00000092177	NonProperStrand	2	chr17	13112457	13112507	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-11.9614
chr19	46080183	46080199	protein_coding	Hps6	exon	ENSMUSG00000074811	NonProperStrand	45	chr17	35087894	35087919	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-5.7630
chr3	91866487	91866567	LINE	L1MA4	L1	chr3L1MA491866485	ProperStrand	1	chr3	91866759	91866849	SINE	B3	B2	chr3B391866771	ProperStrand	1	1	-inf
chr3	89838087	89842333	protein_coding	Ubap2l	exon	ENSMUSG00000042520	ProperStrand	88	chr8	129468746	129468798	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-3.6930
chr9	21823257	21823273	protein_coding	Elavl3	exon	ENSMUSG00000003410	NonProperStrand	137	chr19	8798483	8798553	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-3.6428
chr8	23763839	23763856	protein_coding	Polb	utr5	ENSMUSG00000031536	ProperStrand	23	chr4	147993444	147994740	protein_coding	Tardbp	exon	ENSMUSG00000041459	ProperStrand	120	1	-13.8651
chr19	31157712	31157802	protein_coding	Cstf2t	exon	ENSMUSG00000053536	ProperStrand	48	chr10	110918560	110918640	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-6.5229
chr9	57476547	57476674	protein_coding	Csk	exon	ENSMUSG00000032312	ProperStrand	17	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.8783
chr4	137194138	137194156	protein_coding	Usp48	exon	ENSMUSG00000043411	ProperStrand	135	chr3	68889067	68889167	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-1.8725
chr9	40612879	40612922	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	chr2	158182156	158182207	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-1.6578
chr8	109583778	109583832	protein_coding	Nip7	utr3	ENSMUSG00000031917	ProperStrand	18	chr9	39358287	39358304	protein_coding	Olfr958	exon	ENSMUSG00000050853	NonProperStrand	266	2	-19.4546
chr1	63356464	63356488	protein_coding	Zdbf2	exon	ENSMUSG00000027520	ProperStrand	72	chr8	73419657	73419729	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-7.2515
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr4	56910496	56910618	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-1.5863
chr8	113565482	113565539	protein_coding	Aars	exon	ENSMUSG00000031960	ProperStrand	355	chr12	112779245	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-1.6370
chr16	91729702	91729723	protein_coding	Itsn1	utr5	ENSMUSG00000022957	ProperStrand	172	chr14	61398407	61398423	protein_coding	C1qtnf9	exon	ENSMUSG00000071347	ProperStrand	187	1	-8.9228
chr12	8755569	8756573	protein_coding	Pum2	utr3	ENSMUSG00000020594	ProperStrand	39	chr16	23110902	23110982	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-2.5911
chr2	73689035	73701266	protein_coding	Atf2	exon	ENSMUSG00000027104	ProperStrand	37	chr18	35716831	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-10.4801
chr8	120031739	120031757	protein_coding	Plcg2	intron	ENSMUSG00000034330	ProperStrand	57	chr4	131865855	131865910	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.8480
chr8	65171733	65171823	SINE	B4	B4	chr8B465171756	ProperStrand	1	chr8	65171406	65171496	SINE	B4A	B4	chr8B4A65171255	ProperStrand	1	1	-inf
chr1	74483198	74483234	protein_coding	Usp37	utr3	ENSMUSG00000033364	ProperStrand	47	chr3	123210876	123210976	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.4742
chr19	60847580	60847998	protein_coding	Eif3a	exon	ENSMUSG00000024991	ProperStrand	287	chr8	122605208	122605243	protein_coding	Zdhhc7	utr3	ENSMUSG00000031823	ProperStrand	12	1	-13.4611
chr1	158555596	158555696	protein_coding	Abl2	exon	ENSMUSG00000026596	ProperStrand	37	chr5	130300520	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.3697
chr12	89699698	89699714	protein_coding	Adck1	utr3	ENSMUSG00000021044	NonProperStrand	42	chr17	24615989	24616006	protein_coding	Mlst8	utr5	ENSMUSG00000024142	NonProperStrand	40	1	-14.8578
chr14	8737955	8781070	protein_coding	Flnb	exon	ENSMUSG00000025278	ProperStrand	124	chr7	116663640	116663764	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-2.5902
chr3	14601887	14601977	protein_coding	E2f5	intron	ENSMUSG00000027552	ProperStrand	10	chr3	13894650	13894730	protein_coding	Ralyl	intron	ENSMUSG00000039717	ProperStrand	2	1	-inf
chr6	122269443	122273828	protein_coding	Phc1	exon	ENSMUSG00000040669	ProperStrand	158	chr16	23111383	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-1.9206
chr7	27466699	27466715	protein_coding	Cyp2b23	exon	ENSMUSG00000040650	ProperStrand	39	chr7	116663645	116663750	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-8.2855
chr8	87223594	87223612	protein_coding	Trmt1	exon	ENSMUSG00000001909	NonProperStrand	60	chr13	46789429	46792052	protein_coding	Nup153	exon	ENSMUSG00000021374	ProperStrand	69	1	-13.0331
chr2	27302561	27302613	protein_coding	Brd3	utr3	ENSMUSG00000026918	ProperStrand	85	chr7	117189862	117189943	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	2	-9.0360
chr5	74489266	74489331	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr14	52787683	52787715	protein_coding	Supt16h	intron	ENSMUSG00000035726	ProperStrand	193	2	-5.7937
chr12	106005330	106005347	protein_coding	Clmn	utr3	ENSMUSG00000021097	NonProperStrand	30	chr2	26494708	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	4	-14.1772
chr5	66996662	66996729	protein_coding	Apbb2	intron	ENSMUSG00000029207	ProperStrand	25	chr10	61329160	61330213	protein_coding	Col13a1	exon	ENSMUSG00000058806	ProperStrand	120	1	-13.6950
chr5	129528661	129528693	protein_coding	Ran	exon	ENSMUSG00000029430	ProperStrand	82	chr9	15119631	15119693	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-5.7383
chr11	34311292	34311309	protein_coding	Dock2	intron	ENSMUSG00000020143	ProperStrand	18	chr11	6428091	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-9.0563
chr4	15968139	15968155	LTR	RMER17B	ERVK	chr4RMER17B15967870	ProperStrand	3	chr4	131865869	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-inf
chr2	83039791	83039881	LINE	L1Md_T	L1	chr2L1Md_T83037823	ProperStrand	1	chr7	54442592	54442682	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-inf
chr19	10696860	10696878	protein_coding	Ddb1	exon	ENSMUSG00000024740	ProperStrand	304	chr1	30861273	30861386	protein_coding	Phf3	exon	ENSMUSG00000048874	ProperStrand	102	1	-8.9975
chr4	40753970	40754070	protein_coding	B4galt1	utr3	ENSMUSG00000028413	ProperStrand	25	chr2	158182156	158182200	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	5	-20.8107
chr6	148759241	148779915	protein_coding	Ipo8	exon	ENSMUSG00000040029	ProperStrand	22	chr19	8963027	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	13	-inf
chr16	32493706	32493725	LINE	Lx5	L1	chr16Lx532493210	ProperStrand	1	chr2	90235312	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	1	-inf
chr7	38354919	38354935	protein_coding	Zfp536	exon	ENSMUSG00000043456	NonProperStrand	236	chr1	88247812	88247835	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-2.5664
chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	chr10	119286688	119286704	protein_coding	Grip1	intron	ENSMUSG00000034813	ProperStrand	38	1	-10.7943
chr2	41199972	41199989	protein_coding	Lrp1b	exon	ENSMUSG00000049252	ProperStrand	376	chr17	13112450	13112548	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-1.4027
chr14	70205241	70205258	protein_coding	Rhobtb2	utr5	ENSMUSG00000022075	ProperStrand	22	chr17	39985306	39985337	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-7.9368
chr11	23264437	23267353	protein_coding	Usp34	exon	ENSMUSG00000056342	ProperStrand	68	chr16	23111735	23111815	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.7080
chr12	112117926	112117967	protein_coding	Cinp	exon	ENSMUSG00000021276	ProperStrand	18	chr2	26494708	26494802	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.4011
chr10	127556489	127565304	protein_coding	Baz2a	utr3	ENSMUSG00000040054	ProperStrand	274	chr10	23505152	23505268	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	6	-1.5052
chr3	66100724	66100740	protein_coding	Veph1	utr5	ENSMUSG00000027831	NonProperStrand	92	chr10	80643719	80643739	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-5.2626
chr17	39985356	39985417	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr18	75160711	75160776	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	1	-2.1303
chr2	129998643	129998713	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr15	74392750	74392768	protein_coding	Bai1	intron	ENSMUSG00000034730	NonProperStrand	56	2	-13.1467
chr11	104505053	104505114	protein_coding	Itgb3	exon	ENSMUSG00000020689	ProperStrand	6	chr5	111121108	111121198	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-11.1699
chr16	90220999	90221079	protein_coding	Sod1	utr5	ENSMUSG00000022982	ProperStrand	75	chr19	8963027	8963117	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.9113
chr4	131908689	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	chr17	71990218	71990280	snoRNA	ENSMUSG00000092887_Snord53	.	ENSMUSG00000092887	ProperStrand	53	2	-2.6528
chr8	13174605	13174643	protein_coding	Lamp1	utr3	ENSMUSG00000031447	ProperStrand	92	chr4	139035417	139036583	protein_coding	Ubr4	exon	ENSMUSG00000066036	ProperStrand	304	1	-9.2040
chr4	151730301	151730737	protein_coding	Chd5	exon	ENSMUSG00000005045	NonProperStrand	147	chr3	134924674	134927324	protein_coding	Cenpe	exon	ENSMUSG00000045328	ProperStrand	71	1	-11.1763
chr5	109111803	109111893	protein_coding-noncoding	Idua	utr5	ENSMUSG00000033540	NonProperStrand	1	chr5	109112087	109112167	protein_coding	Idua	exon	ENSMUSG00000033540	NonProperStrand	1	1	-inf
chr4	32783238	32783269	protein_coding	Mdn1	exon	ENSMUSG00000058006	ProperStrand	184	chr10	23505152	23505255	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-0.8717
chr2	167301852	167301871	protein_coding	Slc9a8	utr3	ENSMUSG00000039463	NonProperStrand	4	chr17	66093857	66093874	protein_coding	Rab31	intron	ENSMUSG00000056515	NonProperStrand	14	1	-inf
chr4	132746085	132748030	protein_coding	Wasf2	exon	ENSMUSG00000028868	ProperStrand	56	chr2	158185530	158185580	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-6.6226
chr13	63612936	63612952	protein_coding	Ptch1	exon	ENSMUSG00000021466	NonProperStrand	118	chr17	45707262	45707279	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	1	-5.4011
chr16	58435561	58466277	protein_coding	Dcbld2	utr3	ENSMUSG00000035107	ProperStrand	56	chr16	23110828	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-0.9026
chr9	26440743	26440759	DNA	MER5A	MER1_type	chr9MER5A26440741	ProperStrand	108	chr17	35088953	35089010	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-4.7258
chrX	98504138	98504155	protein_coding	Nlgn3	exon	ENSMUSG00000031302	ProperStrand	6	chr9	120039588	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-7.9123
chr10	128002889	128002916	protein_coding	Pa2g4	utr5	ENSMUSG00000025364	ProperStrand	72	chr19	9042778	9042840	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	1	-9.0986
chr3	144817605	144817621	LINE	Lx9	L1	chr3Lx9144817450	ProperStrand	30	chr2	130103451	130103505	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-9.4583
chr7	29105259	29105330	protein_coding	Supt5h	exon	ENSMUSG00000003435	ProperStrand	123	chr17	24857720	24857810	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.2022
chr9	40613094	40613184	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr15	79908929	79909009	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-1.0167
chr1	137641899	137641997	protein_coding	Csrp1	exon	ENSMUSG00000026421	NonProperStrand	5	chr2	68109809	68109830	protein_coding	Stk39	intron	ENSMUSG00000027030	NonProperStrand	9	1	-18.9379
chr14	56159295	56159312	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	chr6	125115313	125115622	protein_coding	Gapdh	utr5	ENSMUSG00000057666	ProperStrand	356	4	-inf
chr17	39985565	39985655	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr8	113366285	113366354	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	1	-2.1235
chr7	134729005	134729845	protein_coding	Gm166	exon	ENSMUSG00000057176	ProperStrand	22	chr7	29136623	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.1896
chr8	114009031	114009244	protein_coding	Wdr59	exon	ENSMUSG00000031959	ProperStrand	18	chr4	131908813	131908893	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.1942
chr8	72287172	72287188	protein_coding	Zfp866	utr3	ENSMUSG00000043090	NonProperStrand	134	chr10	23505150	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	8	-7.2157
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr5	130295419	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	8	-7.5356
chr5	110598201	110598230	protein_coding	Chfr	exon	ENSMUSG00000014668	ProperStrand	6	chr19	8799849	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-9.6428
chr14	120878033	120878053	protein_coding	Rap2a	exon	ENSMUSG00000051615	ProperStrand	8	chrX	131122483	131122573	protein_coding	Rpl36a	utr3	ENSMUSG00000079435	ProperStrand	53	2	-19.6406
chr5	108333647	108333665	snoRNA	ENSMUSG00000064453_Snord21	.	ENSMUSG00000064453	ProperStrand	201	chr11	69483136	69483236	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-1.4858
chr9	72594991	72595029	protein_coding	Nedd4	exon	ENSMUSG00000032216	ProperStrand	308	chr18	33954814	33954904	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-0.9101
chr16	23111373	23111463	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	chr11	69482351	69482386	snoRNA	ENSMUSG00000089542_snoU6-77	.	ENSMUSG00000089542	ProperStrand	138	3	-1.4923
chr13	102786946	102786963	LINE	Lx8	L1	chr13Lx8102786451	ProperStrand	6	chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	1	-16.0855
chr11	94075130	94075186	protein_coding	Tob1	exon	ENSMUSG00000037573	ProperStrand	4	chr10	23505256	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-6.2798
chr17	57164260	57164292	protein_coding	Khsrp	exon	ENSMUSG00000007670	ProperStrand	353	chr8	32260335	32260374	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	2	-2.8541
chr19	45067069	45067121	protein_coding	Sema4g	exon	ENSMUSG00000025207	ProperStrand	58	chr15	5068442	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-6.1338
chr5	129526636	129526769	protein_coding	Ran	exon	ENSMUSG00000029430	ProperStrand	82	chr15	98356776	98356814	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	2	-11.4592
chr5	140776179	140776279	protein_coding	Mad1l1	exon	ENSMUSG00000029554	ProperStrand	69	chr11	62418017	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-5.2845
chr2	90235314	90235345	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	122032342	122032432	protein_coding	Mbtps1	utr3	ENSMUSG00000031835	ProperStrand	81	2	-6.5597
chr1	177361660	177361677	protein_coding	Rgs7	intron	ENSMUSG00000026527	NonProperStrand	12	chr9	50675038	50675474	protein_coding	Ppp2r1b	exon	ENSMUSG00000032058	ProperStrand	22	2	-inf
chr10	90463844	90522340	protein_coding	Apaf1	exon	ENSMUSG00000019979	ProperStrand	27	chr16	23111377	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-4.4613
chr10	72141589	72141607	LTR	MTD-int	MaLR	chr10MTD-int72141538	NonProperStrand	1	chr4	131865380	131865493	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-inf
chr8	73290465	73290529	protein_coding	Ifi30	exon	ENSMUSG00000031838	ProperStrand	40	chr18	35714189	35714279	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.2014
chr2	169007905	169007922	LTR	MTD	MaLR	chr2MTD169007598	NonProperStrand	1	chr9	120038467	120038535	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-inf
chr3	101618554	101618644	protein_coding	Mab21l3	utr3	ENSMUSG00000044313	ProperStrand	11	chr4	131865866	131865946	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.8470
chr9	64043164	64043264	protein_coding	Map2k1	intron	ENSMUSG00000004936	ProperStrand	36	chr4	131866609	131866673	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	1	-10.1340
chr19	41990202	41992485	protein_coding	Pgam1	utr3	ENSMUSG00000011752	ProperStrand	124	chr9	120038467	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-3.3179
chr13	12519128	12519172	protein_coding	Heatr1	exon	ENSMUSG00000050244	ProperStrand	74	chr9	120038558	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.6690
chr17	86455991	86456014	protein_coding	Srbd1	intron	ENSMUSG00000024135	ProperStrand	16	chr10	23505152	23505248	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.4264
chr2	158182156	158182180	lincRNA	9430008C03Rik	intron	ENSMUSG00000085385	ProperStrand	1039	chr7	117166747	117166847	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	3	-1.5866
chr11	74477665	74477755	protein_coding-noncoding	1300001I01Rik	utr5	ENSMUSG00000020741	ProperStrand	1	chr11	74477482	74477562	protein_coding	1300001I01Rik	intron	ENSMUSG00000020741	ProperStrand	76	1	-inf
chr11	102294587	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr14	31827478	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-2.7510
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr3	68889121	68889211	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	9	-2.1141
chr4	21922274	21922291	protein_coding-noncoding	6230409E13Rik	utr5	ENSMUSG00000028246	ProperStrand	18	chr12	110874223	110874257	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	1	-12.4201
chr8	88066306	88066396	protein_coding	Dnaja2	intron	ENSMUSG00000031701	ProperStrand	39	chr3	51261782	51261872	protein_coding	Naa15	intron	ENSMUSG00000063273	NonProperStrand	3	1	-20.0818
chr10	79608033	79608248	protein_coding	Atp5d	exon	ENSMUSG00000003072	ProperStrand	44	chr8	113366285	113366310	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	1	-9.8034
chr2	135820133	135824416	protein_coding	Plcb4	exon	ENSMUSG00000039943	NonProperStrand	57	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.2853
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr2	121276791	121276807	protein_coding	Serinc4	intron	ENSMUSG00000046110	ProperStrand	13	1	-10.9018
chr16	91925813	91925846	protein_coding	Atp5o	exon	ENSMUSG00000022956	ProperStrand	37	chr17	24857717	24857807	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-5.4240
chr1	34328220	34328327	protein_coding	Dst	exon	ENSMUSG00000026131	ProperStrand	461	chr1	120577179	120577226	protein_coding	Tfcp2l1	utr3	ENSMUSG00000026380	ProperStrand	158	1	-7.2990
chr11	48614367	48614434	snoRNA	ENSMUSG00000064500_SNORD95	.	ENSMUSG00000064500	ProperStrand	100	chr2	158182187	158182277	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-4.0274
chr4	133928014	133928114	protein_coding	Extl1	utr5	ENSMUSG00000028838	ProperStrand	14	chr16	23110904	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.2008
chr12	74652527	74652617	LTR	RLTRETN_Mm	ERVK	chr12RLTRETN_Mm74652322	ProperStrand	9	chr9	83993764	83993844	protein_coding	Bckdhb	intron	ENSMUSG00000032263	NonProperStrand	4	1	-19.7249
chr7	100007240	100007283	protein_coding	4632434I11Rik	exon	ENSMUSG00000030641	ProperStrand	1	chr3	123210912	123210937	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-inf
chr16	11144113	11144203	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr10	39978349	39978439	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	NonProperStrand	27	1	-12.0747
chr16	93591218	93591318	protein_coding	Setd4	exon	ENSMUSG00000022948	ProperStrand	2	chr4	131908688	131908753	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-8.0336
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr4	85016349	85016365	protein_coding	Sh3gl2	intron	ENSMUSG00000028488	NonProperStrand	313	1	-5.4498
chr11	72264650	72264674	protein_coding	Mybbp1a	exon	ENSMUSG00000040463	ProperStrand	279	chr5	103023383	103023402	protein_coding	Arhgap24	intron	ENSMUSG00000057315	NonProperStrand	21	1	-12.3591
chr12	60319880	60320343	protein_coding	Fbxo33	exon	ENSMUSG00000035329	ProperStrand	5	chr4	131865856	131865946	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-10.8861
chrX	156315499	156315519	protein_coding	Sh3kbp1	intron	ENSMUSG00000040990	ProperStrand	67	chr1	162965579	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.0769
chrX	131121105	131122038	protein_coding	Rpl36a	exon	ENSMUSG00000079435	ProperStrand	53	chr18	73693110	73693138	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-5.7672
chr7	63163830	63163881	protein_coding	Cyfip1	exon	ENSMUSG00000030447	ProperStrand	23	chrX	71517888	71517904	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-8.4683
chr3	68889097	68889147	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	chr6	38483963	38484004	tRNA	tRNA107-ArgCCT	.	283662	ProperStrand	63	1	-3.1685
chr12	110888903	110888957	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr1	161270493	161270548	snoRNA	ENSMUSG00000089536_Scarna3a	.	ENSMUSG00000089536	ProperStrand	247	3	-13.4966
chr13	35079367	35079384	protein_coding	Eci2	exon	ENSMUSG00000021417	ProperStrand	6	chr2	130101257	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-11.3294
chr7	30184955	30185055	protein_coding	Sipa1l3	utr5	ENSMUSG00000030583	ProperStrand	559	chr1	162968445	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-1.9755
chr6	47738067	47738113	misc_RNA	Y_RNA	.	ENSMUSG00000065701	ProperStrand	129	chr11	97642952	97643011	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.2788
chr7	99792660	99806968	protein_coding	Pcf11	exon	ENSMUSG00000041328	ProperStrand	27	chr17	24857732	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	3	-9.2654
chr19	8798726	8798809	lincRNA	Snhg1	exon	ENSMUSG00000090867	ProperStrand	100	chr5	74489639	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-2.8503
chr13	23627334	23627389	protein_coding	Hist1h3g	exon	ENSMUSG00000062417	ProperStrand	25	chr9	120039533	120039622	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	3	-11.8528
mmu-miR-1949	8	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr8	113569436	113569537	protein_coding	Aars	exon	ENSMUSG00000031960	ProperStrand	355	10	-19.3494
chr8	74492034	74492053	protein_coding	Zfp961	exon	ENSMUSG00000052446	ProperStrand	35	chr9	120039578	120039678	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-4.3274
chr2	160529401	160530579	protein_coding	Top1	exon	ENSMUSG00000070544	ProperStrand	14	chr10	90581059	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-7.7067
chrX	35886134	35886166	protein_coding	Cul4b	utr3	ENSMUSG00000031095	ProperStrand	31	chr8	125418802	125418818	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	1	-10.9488
chr4	118151885	118151902	protein_coding-noncoding	Tie1	utr3	ENSMUSG00000033191	ProperStrand	3	chr17	39985175	39985244	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-12.2652
chr13	53437794	53454256	protein_coding	Sptlc1	exon	ENSMUSG00000021468	ProperStrand	33	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	5	-17.7743
chr9	103401280	103401296	protein_coding	Tmem108	exon	ENSMUSG00000042757	NonProperStrand	323	chr15	34370620	34370676	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-0.8820
chr4	3487746	3487790	protein_coding	Tmem68	exon	ENSMUSG00000028232	ProperStrand	4	chr16	23111773	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-7.1763
chr1	88426773	88426812	protein_coding	Ptma	utr3	ENSMUSG00000026238	ProperStrand	385	chr19	8800423	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-1.4105
chr4	109349455	109349545	protein_coding	Faf1	utr5	ENSMUSG00000010517	ProperStrand	29	chr1	162967515	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.8538
chr5	74489216	74489306	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr2	168008522	168008546	protein_coding	Adnp	exon	ENSMUSG00000051149	ProperStrand	48	4	-18.4415
chr14	61083764	61083854	LTR	ORR1D1	MaLR	chr14ORR1D161083534	NonProperStrand	1	chr14	60794935	60795015	protein_coding	Atp8a2	intron	ENSMUSG00000021983	ProperStrand	14	1	-inf
chr15	3227191	3227207	protein_coding	Sepp1	exon	ENSMUSG00000064373	NonProperStrand	4	chr5	115940329	115940407	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	1	-14.4082
chr11	60054980	60054997	antisense	Gm12265	.	ENSMUSG00000085132	ProperStrand	5	chr16	23110853	23110943	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-11.1940
chr17	31986506	31986553	protein_coding	Sik1	exon	ENSMUSG00000024042	ProperStrand	55	chr8	75281100	75281117	protein_coding	Sin3b	exon	ENSMUSG00000031622	ProperStrand	66	1	-13.2980
chr19	7030778	7032128	protein_coding	Plcb3	exon	ENSMUSG00000024960	ProperStrand	111	chr5	140247853	140248048	protein_coding	Ints1	exon	ENSMUSG00000029547	ProperStrand	45	1	-12.6581
chr4	136099351	136099431	protein_coding	Luzp1	exon	ENSMUSG00000001089	ProperStrand	35	chr2	128501581	128501881	protein_coding	Anapc1	exon	ENSMUSG00000014355	ProperStrand	38	2	-20.8037
chr10	23505535	23505602	protein_coding	Rps12	intron	ENSMUSG00000061983	ProperStrand	309	chr5	121655125	121655155	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-1.0690
chr1	163171885	163173710	protein_coding	Prdx6	exon	ENSMUSG00000026701	ProperStrand	23	chr11	69483136	69483192	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	4	-13.7432
chr18	78033399	78033415	lincRNA	F830208F22Rik	exon	ENSMUSG00000073529	ProperStrand	16	chr16	23110827	23110852	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.9771
chr7	68147977	68147993	LINE	Lx3_Mus	L1	chr7Lx3_Mus68146918	ProperStrand	9	chr1	138523266	138523282	protein_coding	Zfp281	exon	ENSMUSG00000041483	ProperStrand	18	1	-18.6028
chr11	94434480	94463004	protein_coding	Acsf2	exon	ENSMUSG00000076435	ProperStrand	34	chr16	23110945	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-6.0361
chr3	157729963	157729979	protein_coding	Lrrc40	utr3	ENSMUSG00000063052	ProperStrand	147	chr4	131866154	131866183	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-2.0934
chr1	177829590	177829680	protein_coding	Exo1	exon	ENSMUSG00000039748	ProperStrand	27	chrX	34622940	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-4.6723
chr1	34359784	34359807	protein_coding	Dst	exon	ENSMUSG00000026131	ProperStrand	461	chr10	116374576	116374633	protein_coding	Rab3ip	exon	ENSMUSG00000064181	ProperStrand	18	1	-11.6716
chr1	59748785	59748814	snoRNA	ENSMUSG00000077345_Snord70	.	ENSMUSG00000077345	ProperStrand	61	chr9	64143736	64143826	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-7.7393
mmu-miR-6238	1	20	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr4	130305551	130305619	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	4	-19.4953
chr9	98898289	98898379	protein_coding	Faim	intron	ENSMUSG00000032463	ProperStrand	2	chr16	23111378	23111458	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-8.0851
chr19	43579408	43579425	protein_coding	Got1	intron	ENSMUSG00000025190	NonProperStrand	147	chr6	71832602	71832687	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-3.8936
chr8	112065767	112066296	protein_coding	Pmfbp1	exon	ENSMUSG00000031727	NonProperStrand	17	chr18	73693085	73693107	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-8.0460
chr17	24557266	24558717	protein_coding	Rnps1	exon	ENSMUSG00000034681	ProperStrand	40	chr7	52382752	52382775	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-7.5604
chr3	96654255	96654271	protein_coding	Pdzk1	exon	ENSMUSG00000038298	ProperStrand	101	chr11	106362557	106362609	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-6.3722
chr16	78770373	78770393	LTR	RMER20A	ERVK	chr16RMER20A78770046	NonProperStrand	1	chr16	23110828	23110893	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr2	90235315	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	77633699	77633716	protein_coding	Mcm5	exon	ENSMUSG00000005410	ProperStrand	199	1	-2.2949
chr13	107737212	107737228	protein_coding	Dimt1	utr5	ENSMUSG00000021692	ProperStrand	185	chr7	117190013	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-1.4597
chr17	57476096	57476176	SINE	B1_Mus1	Alu	chr17B1_Mus157476093	NonProperStrand	1	chr17	57475770	57475860	SINE	B4A	B4	chr17B4A57475730	ProperStrand	1	1	-inf
chr17	32453268	32453285	protein_coding	Akap8	exon	ENSMUSG00000024045	ProperStrand	339	chr1	162966813	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-2.9756
chr5	64792049	64792070	LTR	MLT1H	MaLR	chr5MLT1H64791748	NonProperStrand	30	chr10	77746958	77746996	protein_coding	Agpat3	exon	ENSMUSG00000001211	ProperStrand	22	1	-16.7695
chr9	120040240	120040259	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	chr10	90581034	90581087	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	2	-2.7891
chr15	96839437	96839460	protein_coding	Slc38a4	exon	ENSMUSG00000022464	ProperStrand	139	chr5	121655037	121655127	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.2584
chr19	56671913	56671932	protein_coding	Nhlrc2	exon	ENSMUSG00000025078	ProperStrand	38	chr4	116826699	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-7.6930
chr5	100855902	100855943	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr11	75305049	75305126	protein_coding	Prpf8	exon	ENSMUSG00000020850	ProperStrand	255	11	-inf
chr15	98742034	98742596	protein_coding	Lmbr1l	exon	ENSMUSG00000022999	ProperStrand	8	chr17	35020833	35020855	protein_coding	C2	intron	ENSMUSG00000024371	ProperStrand	4	1	-19.5686
chr5	72895173	72895191	protein_coding	Corin	exon	ENSMUSG00000005220	NonProperStrand	11	chr5	121655017	121655153	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	6	-19.9367
chr11	53407458	53407524	protein_coding	Kif3a	exon	ENSMUSG00000018395	ProperStrand	23	chr15	58777669	58777761	protein_coding	Mtss1	intron	ENSMUSG00000022353	ProperStrand	68	1	-14.9903
chr3	14565746	14565762	protein_coding	Lrrcc1	exon	ENSMUSG00000027550	NonProperStrand	1	chr1	93827263	93827353	protein_coding	Hdac4	utr5	ENSMUSG00000073617	NonProperStrand	2	1	-inf
chr7	13516177	13516204	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr2	76398741	76398758	protein_coding	Osbpl6	intron	ENSMUSG00000042359	ProperStrand	19	1	-10.9946
chr15	73411208	73411251	protein_coding	Slc45a4	utr3	ENSMUSG00000079020	ProperStrand	127	chr16	23111389	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-0.9528
chr16	55969701	55969717	protein_coding	Rpl24	exon	ENSMUSG00000022601	ProperStrand	149	chr9	40612830	40612920	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	2	-12.3483
chr4	123059946	123060428	protein_coding	Macf1	exon	ENSMUSG00000028649	ProperStrand	320	chr8	127256262	127256342	protein_coding	Arv1	intron	ENSMUSG00000031982	ProperStrand	13	1	-13.0756
chr9	59516480	59516759	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr17	6232006	6232022	protein_coding	Tulp4	exon	ENSMUSG00000034377	NonProperStrand	265	1	-4.2847
chr7	26472435	26472451	protein_coding	Tgfb1	utr5	ENSMUSG00000002603	NonProperStrand	154	chr14	58439378	58440912	protein_coding	F630043A04Rik	exon	ENSMUSG00000021965	ProperStrand	24	1	-13.2793
chr11	20012671	20012691	protein_coding	Actr2	intron	ENSMUSG00000020152	NonProperStrand	17	chr2	181405343	181405359	protein_coding	Sox18	exon	ENSMUSG00000046470	ProperStrand	96	1	-14.9246
chr13	64466535	64466584	protein_coding	Ctsl	exon	ENSMUSG00000021477	ProperStrand	44	chr13	49779746	49779805	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	2	-12.2281
chr2	90235292	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	135524654	135524671	protein_coding	Lypla2	utr3	ENSMUSG00000028670	ProperStrand	9	1	-8.2671
chr13	100761211	100761227	protein_coding	Mccc2	exon	ENSMUSG00000021646	ProperStrand	29	chr5	54389949	54389965	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	1	-12.2516
chr8	74842996	74843412	protein_coding	Klf2	exon	ENSMUSG00000055148	ProperStrand	82	chr7	117189985	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-4.8321
chr4	43505704	43505794	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr10	77460348	77462605	protein_coding	Pfkl	exon	ENSMUSG00000020277	ProperStrand	179	4	-5.5542
chr1	108675370	108675440	protein_coding	Vps4b	intron	ENSMUSG00000009907	ProperStrand	29	chr15	71624755	71624799	snoRNA	ENSMUSG00000088895_SNORA81	.	ENSMUSG00000088895	ProperStrand	348	5	-19.2501
chr16	29651165	29651255	protein_coding	Opa1	intron	ENSMUSG00000038084	ProperStrand	33	chr15	34370545	34370625	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-4.6811
chr2	138188029	138188045	protein_coding	Btbd3	intron	ENSMUSG00000062098	NonProperStrand	121	chr1	162966812	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-4.8903
chr9	72159492	72159548	protein_coding	Zfp280d	intron	ENSMUSG00000038535	ProperStrand	11	chr4	131908687	131908724	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-14.0384
chr4	151730301	151730737	protein_coding	Chd5	exon	ENSMUSG00000005045	NonProperStrand	147	chr15	100228237	100229904	protein_coding	Slc11a2	exon	ENSMUSG00000023030	ProperStrand	12	1	-14.8043
chr2	138188029	138188045	protein_coding	Btbd3	intron	ENSMUSG00000062098	NonProperStrand	121	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.0642
chr3	105762083	105762116	protein_coding	Atp5f1	utr5	ENSMUSG00000000563	ProperStrand	28	chr17	24857732	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-6.2280
chr17	57161846	57161936	protein_coding	Khsrp	utr3	ENSMUSG00000007670	ProperStrand	353	chr10	110918549	110918629	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-0.7201
chr15	41691218	41691235	protein_coding	Oxr1	utr3	ENSMUSG00000022307	ProperStrand	21	chr17	71702756	71702810	protein_coding	Smchd1	exon	ENSMUSG00000024054	ProperStrand	79	1	-14.8867
chr2	90235292	90235341	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr16	38347274	38347290	protein_coding	Cox17	exon	ENSMUSG00000046516	ProperStrand	5	1	-9.5409
chr19	46948871	46948895	protein_coding	Cnnm2	intron	ENSMUSG00000064105	ProperStrand	18	chr10	23505148	23505259	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-5.5683
chr4	131888193	131888244	protein_coding	Rcc1	utr3	ENSMUSG00000028896	ProperStrand	55	chr16	32243858	32243934	snoRNA	ENSMUSG00000080440_SNORA79	.	ENSMUSG00000080440	ProperStrand	140	5	-18.4729
chr19	59048864	59064732	protein_coding	4930506M07Rik	utr3	ENSMUSG00000041362	ProperStrand	36	chr16	23110907	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-5.7356
chr8	88062729	88072554	protein_coding	Dnaja2	exon	ENSMUSG00000031701	ProperStrand	39	chr5	130300473	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-5.6248
chr13	90238282	90238344	protein_coding	Tmem167	intron	ENSMUSG00000012422	ProperStrand	11	chr4	131908356	131908414	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-7.4568
chr11	116014039	116014058	protein_coding	Fbf1	exon	ENSMUSG00000020776	NonProperStrand	36	chr6	145564547	145564563	protein_coding	Tuba3b	utr5	ENSMUSG00000067338	ProperStrand	152	1	-12.4802
chr10	80097119	80103154	protein_coding	Csnk1g2	utr5	ENSMUSG00000003345	ProperStrand	28	chr16	23110913	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.2442
chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	chr4	123049655	123049713	protein_coding	Macf1	exon	ENSMUSG00000028649	ProperStrand	320	2	-9.6638
chr11	60602493	60615046	protein_coding	Shmt1	utr3	ENSMUSG00000020534	ProperStrand	60	chr9	120039533	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-5.6817
chr11	87003631	87010382	protein_coding	Trim37	exon	ENSMUSG00000018548	ProperStrand	17	chr5	123061106	123064452	protein_coding	Ift81	utr5	ENSMUSG00000029469	NonProperStrand	3	1	-inf
chr1	188563679	188563741	protein_coding	Rrp15	exon	ENSMUSG00000001305	ProperStrand	16	chr7	118219574	118219606	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-6.7705
chr2	162901258	162901374	protein_coding-noncoding	Mybl2	utr5	ENSMUSG00000017861	ProperStrand	2	chr3	152450610	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	1	-16.2578
chr10	76515736	76521861	protein_coding	Col18a1	utr3	ENSMUSG00000001435	ProperStrand	287	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	6	-8.1996
chr16	91657109	91657197	protein_coding	Son	exon	ENSMUSG00000022961	ProperStrand	59	chr11	55065871	55065887	protein_coding	Fat2	exon	ENSMUSG00000055333	NonProperStrand	11	1	-16.7218
chr10	128159165	128159255	protein_coding	Dgka	intron	ENSMUSG00000025357	ProperStrand	10	chr2	26494760	26494840	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-6.5951
chr9	79607394	79607412	protein_coding	Cox7a2	intron	ENSMUSG00000032330	ProperStrand	10	chr1	162967516	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-6.9960
chr6	34723234	34723254	protein_coding	Cald1	utr3	ENSMUSG00000029761	ProperStrand	19	chr4	108224095	108224112	protein_coding	Zcchc11	intron	ENSMUSG00000034610	NonProperStrand	9	1	-19.6683
chr13	99080141	99080981	protein_coding	Btf3	exon	ENSMUSG00000021660	ProperStrand	64	chr4	131866238	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-3.5458
chr16	11144176	11144276	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr8	125418802	125418819	protein_coding	Gm20388	intron	ENSMUSG00000092329	ProperStrand	295	1	-7.2813
chr7	123306958	123307048	protein_coding	Plekha7	intron	ENSMUSG00000045659	ProperStrand	66	chr9	40612830	40612861	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	5	-20.5934
chr17	87057107	87057197	protein_coding	Prkce	utr3	ENSMUSG00000045038	ProperStrand	19	chr16	23110884	23110991	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-5.0037
chr7	26472435	26472451	protein_coding	Tgfb1	utr5	ENSMUSG00000002603	NonProperStrand	154	chr15	81201952	81202000	protein_coding	St13	exon	ENSMUSG00000022403	ProperStrand	59	1	-11.4554
chr13	9833554	9833660	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr16	23109046	23109093	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	3	-1.3694
chr18	34766804	34766855	protein_coding	Brd8	exon	ENSMUSG00000003778	ProperStrand	27	chr7	58851580	58851597	protein_coding	Ano5	utr3	ENSMUSG00000055489	ProperStrand	13	1	-17.9550
chr8	82196780	82196832	protein_coding	Otud4	exon	ENSMUSG00000036990	ProperStrand	45	chr5	74489641	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	4	-13.8830
chr6	91673310	91689030	protein_coding	Slc6a6	exon	ENSMUSG00000030096	ProperStrand	206	chr15	34370570	34370671	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	4	-6.0749
chr16	20502865	20504757	protein_coding	Eif2b5	exon	ENSMUSG00000003235	ProperStrand	38	chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-7.3636
chr10	80809668	80809684	protein_coding	Hmg20b	exon	ENSMUSG00000020232	ProperStrand	157	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-6.6798
chr11	78150285	78150301	protein_coding	Pigs	exon	ENSMUSG00000041958	NonProperStrand	138	chr11	97643007	97643060	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.1873
chr9	108208075	108208123	protein_coding	Tcta	exon	ENSMUSG00000039461	ProperStrand	3	chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	1	-15.8658
chr11	97258710	97258734	protein_coding	Socs7	utr3	ENSMUSG00000038485	ProperStrand	12	chr3	90082238	90082255	protein_coding	Dennd4b	exon	ENSMUSG00000042404	ProperStrand	13	1	-19.4752
chr6	134666376	134666396	protein_coding	Dusp16	utr3	ENSMUSG00000030203	ProperStrand	27	chr9	21309943	21310001	protein_coding	Dnm2	exon	ENSMUSG00000033335	ProperStrand	48	1	-15.3729
chr14	63757196	63757212	protein_coding	Ctsb	exon	ENSMUSG00000021939	ProperStrand	48	chr9	64023228	64023325	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	1	-8.8929
chr11	75306491	75306550	protein_coding	Prpf8	exon	ENSMUSG00000020850	ProperStrand	255	chr17	24665444	24665500	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	3	-6.1318
chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	chr5	116012497	116012562	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	1	-6.7283
chr10	21555501	21555517	lincRNA	Gm6846	intron	ENSMUSG00000085422	ProperStrand	43	chr8	73419658	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-6.3415
chr11	83298538	83298561	protein_coding	Taf15	exon	ENSMUSG00000020680	ProperStrand	60	chr4	131908809	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.2237
chr7	134671388	134671463	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	chr5	92485099	92485189	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	1	-3.4483
chr2	26780040	26781140	protein_coding	Surf4	exon	ENSMUSG00000014867	ProperStrand	16	chr1	155668580	155668598	protein_coding	Rgsl1	utr3	ENSMUSG00000042641	ProperStrand	4	1	-inf
chr4	133522904	133523713	protein_coding	Hmgn2	exon	ENSMUSG00000003038	ProperStrand	20	chr18	33954816	33954896	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-5.6191
chr12	85196467	85217626	protein_coding	Numb	utr5	ENSMUSG00000021224	ProperStrand	81	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-7.6826
chr10	79532036	79532056	protein_coding	Sbno2	exon	ENSMUSG00000035673	ProperStrand	23	chr4	56910496	56910627	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-8.0240
chr11	82611837	82611854	protein_coding	Lig3	exon	ENSMUSG00000020697	NonProperStrand	9	chr9	78327789	78327817	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-10.1948
chr2	90235315	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	32960188	32960206	Other	RMER1A	Other	chr11RMER1A32960103	ProperStrand	2	1	-11.8388
chr9	96082742	96082832	protein_coding	Gk5	utr3	ENSMUSG00000041440	ProperStrand	7	chr17	24857717	24857797	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-10.6268
chr16	77148412	77148502	LTR	ORR1D1	MaLR	chr16ORR1D177148394	NonProperStrand	1	chr8	101542860	101542952	antisense	Gm15679	.	ENSMUSG00000089819	NonProperStrand	1	1	-inf
chr11	107356017	107356067	protein_coding	Psmd12	exon	ENSMUSG00000020720	ProperStrand	31	chr14	63300958	63301017	protein_coding	Ints6	intron	ENSMUSG00000035161	ProperStrand	11	7	-19.1827
chr11	67693409	67693426	protein_coding	Usp43	exon	ENSMUSG00000020905	ProperStrand	3	chr11	97642952	97643080	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-8.5513
chr11	30737473	30738946	protein_coding	Psme4	exon	ENSMUSG00000040850	ProperStrand	40	chr5	134714684	134715378	protein_coding	Gtf2i	utr3	ENSMUSG00000060261	ProperStrand	41	1	-14.9142
chr17	74783995	74784012	protein_coding	Spast	intron	ENSMUSG00000024068	ProperStrand	13	chr5	121655016	121655096	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-6.7475
chr6	7635265	7635355	protein_coding	Asns	exon	ENSMUSG00000029752	ProperStrand	59	chr5	108336407	108336487	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-4.9134
chr13	55755831	55755847	protein_coding	Ddx46	intron	ENSMUSG00000021500	ProperStrand	87	chr18	80419007	80419032	protein_coding	Txnl4a	exon	ENSMUSG00000057130	ProperStrand	44	1	-13.1936
chr5	112758435	112758451	protein_coding	Tfip11	exon	ENSMUSG00000029345	ProperStrand	111	chr5	125509095	125509112	protein_coding	Ncor2	exon	ENSMUSG00000029478	NonProperStrand	20	1	-14.3054
chr6	83010842	83010939	protein_coding	Dqx1	exon	ENSMUSG00000009145	ProperStrand	2	chr9	64022855	64022877	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-15.4791
chr15	72968539	72976814	protein_coding	Eif2c2	exon	ENSMUSG00000036698	ProperStrand	154	chr7	117189865	117189945	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	2	-7.2930
chr4	149618419	149619249	protein_coding	Eno1	exon	ENSMUSG00000063524	ProperStrand	432	chr9	120039537	120039617	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	4	-2.7094
chr16	23109046	23111512	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr11	6428054	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	4	-1.9456
chr18	19282966	19283046	LTR	ETnERV3-int	ERVK	chr18ETnERV3-int19282909	NonProperStrand	1	chr18	19283462	19283552	LTR	IAPEY2_LTR	ERVK	chr18IAPEY2_LTR19283247	ProperStrand	1	1	-inf
chr2	83693562	83693578	protein_coding	Fam171b	exon	ENSMUSG00000048388	NonProperStrand	175	chr9	15118245	15118304	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-1.6506
chr5	74489215	74489305	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr2	153178049	153178108	protein_coding	Asxl1	intron	ENSMUSG00000042548	ProperStrand	76	1	-5.1611
chr7	6135374	6135464	protein_coding	Zfp444	utr5	ENSMUSG00000044876	ProperStrand	8	chr5	130300458	130300538	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-6.3882
chr7	148022729	148023512	protein_coding	1190003J15Rik	exon	ENSMUSG00000025481	ProperStrand	2	chr3	20238638	20238656	protein_coding	Agtr1b	intron	ENSMUSG00000054988	NonProperStrand	39	1	-19.0965
chr2	13501646	13501670	protein_coding	Vim	exon	ENSMUSG00000026728	ProperStrand	33	chr2	166775775	166775793	protein_coding	Stau1	exon	ENSMUSG00000039536	NonProperStrand	1	1	-inf
chr5	149143030	149143124	protein_coding	Slc7a1	utr3	ENSMUSG00000041313	ProperStrand	65	chr12	112779228	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	4	-14.5997
chr6	136766550	136769078	protein_coding	Wbp11	exon	ENSMUSG00000030216	ProperStrand	87	chr1	63225263	63225322	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	1	-8.0928
chr11	71856746	71856763	protein_coding	Fam64a	exon	ENSMUSG00000020808	NonProperStrand	19	chr5	147646607	147647164	protein_coding	Rpl21	exon	ENSMUSG00000041453	ProperStrand	112	1	-14.4021
chr13	9833551	9833652	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr1	164635587	164640831	protein_coding	Prrc2c	exon	ENSMUSG00000040225	ProperStrand	413	4	-6.2782
chr3	66895559	66895586	protein_coding	Rsrc1	intron	ENSMUSG00000034544	ProperStrand	8	chr19	8800448	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-12.2493
chr15	89201095	89201215	protein_coding	Ncaph2	exon	ENSMUSG00000008690	ProperStrand	65	chr17	39985399	39985499	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	2	-9.4179
chr19	43577491	43579062	protein_coding	Got1	exon	ENSMUSG00000025190	ProperStrand	32	chr11	116938644	116938663	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-7.4106
chr5	23907914	23907930	protein_coding	Abcb8	exon	ENSMUSG00000028973	NonProperStrand	49	chr12	17552949	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-5.4840
chr9	59518458	59519384	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr19	8800085	8800148	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	2	-3.4022
chr12	64709092	64709110	LTR	MTD	MaLR	chr12MTD64708791	NonProperStrand	1	chr18	74938318	74938336	snoRNA	ENSMUSG00000089235_SCARNA17	.	ENSMUSG00000089235	ProperStrand	1128	1	-inf
chr11	43236403	43238235	protein_coding	Pttg1	exon	ENSMUSG00000020415	ProperStrand	6	chr10	23505152	23505215	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-5.3874
chr14	45949538	45949554	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	chr19	23216116	23216169	protein_coding	Klf9	utr5	ENSMUSG00000033863	ProperStrand	83	1	-9.2707
chr10	80830061	80830131	protein_coding	Fzr1	utr3	ENSMUSG00000020235	ProperStrand	26	chr6	52965701	52965718	protein_coding	Jazf1	intron	ENSMUSG00000063568	ProperStrand	43	1	-15.6927
chr11	78101729	78102464	protein_coding	2610507B11Rik	exon	ENSMUSG00000010277	ProperStrand	246	chr18	9315066	9315146	protein_coding	Ccny	utr3	ENSMUSG00000024286	ProperStrand	23	14	-19.1601
chr6	120841173	120841301	protein_coding	Bcl2l13	utr3	ENSMUSG00000009112	ProperStrand	18	chr11	62418070	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-7.9631
chr4	45829234	45829250	protein_coding	Igfbpl1	exon	ENSMUSG00000035551	NonProperStrand	15	chr2	26493365	26493485	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-6.4501
chr16	57391626	57391671	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr9	15118532	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	NonProperStrand	1	1	-inf
mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr14	103553187	103553205	protein_coding	Mycbp2	exon	ENSMUSG00000033004	ProperStrand	129	1	-4.4216
chr16	17325246	17325493	protein_coding	Pi4ka	exon	ENSMUSG00000041720	ProperStrand	39	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.4040
chr7	142887842	142887879	protein_coding	Mki67	exon	ENSMUSG00000031004	ProperStrand	286	chr2	144087324	144087375	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	3	-8.7608
chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	chr2	26207497	26207558	protein_coding	Dnlz	utr5	ENSMUSG00000075467	ProperStrand	6	1	-13.8268
chr17	24665467	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	chr6	97112903	97112941	snoRNA	ENSMUSG00000065728_SNORA36	.	ENSMUSG00000065728	ProperStrand	158	1	-3.1279
chr17	24856620	24856676	protein_coding	Rps2	intron	ENSMUSG00000044533	ProperStrand	373	chr16	23111732	23111822	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	NonProperStrand	47	1	-10.1446
chr11	62416582	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	chr10	110918549	110918657	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	19	-1.4011
chr11	102294589	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr8	32260335	32260385	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-0.9445
chr11	100345053	100345116	protein_coding	Acly	exon	ENSMUSG00000020917	ProperStrand	183	chr6	124864145	124864200	protein_coding	Ptms	utr3	ENSMUSG00000030122	ProperStrand	21	1	-13.2026
chr1	107600564	107600618	protein_coding	2310035C23Rik	exon	ENSMUSG00000026319	ProperStrand	14	chr18	33954816	33954912	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-6.3373
chr11	6428076	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr2	26768061	26768119	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	6	-2.4620
chr10	95499367	95499383	protein_coding	Eea1	utr3	ENSMUSG00000036499	ProperStrand	82	chr11	62416950	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-5.4311
chr5	73189869	73189885	protein_coding	Tec	intron	ENSMUSG00000029217	NonProperStrand	23	chr1	174492230	174492246	protein_coding	Vsig8	exon	ENSMUSG00000049598	ProperStrand	27	1	-16.8123
chr1	72290900	72290987	snRNA	ENSMUSG00000093111_AC120136.1	.	ENSMUSG00000093111	ProperStrand	137	chr15	34370545	34370563	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-2.1055
chr3	87947243	87947296	protein_coding	Mef2d	intron	ENSMUSG00000001419	ProperStrand	15	chr11	106362659	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	2	-16.1818
chr4	137067276	137067842	protein_coding	Hspg2	exon	ENSMUSG00000028763	NonProperStrand	18	chr18	33954909	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	NonProperStrand	24	2	-19.6087
chr2	93873231	93873293	protein_coding	Hsd17b12	utr3	ENSMUSG00000027195	ProperStrand	28	chr16	23110852	23110908	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.2442
chr13	54782808	54785322	protein_coding	Rnf44	exon	ENSMUSG00000034928	ProperStrand	90	chr10	23505152	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-1.5223
chr10	79197842	79197865	protein_coding	Hcn2	exon	ENSMUSG00000020331	ProperStrand	17	chr1	162967498	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-5.9112
chr7	13516162	13516200	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr4	116826707	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	3	-6.3727
chr14	113155433	113155451	LINE	Lx9	L1	chr14Lx9113155330	ProperStrand	1	chr17	24857794	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-inf
chr12	110888922	110888948	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr9	120037898	120037979	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-0.8562
chr4	116826698	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	chr5	108336363	108336468	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	5	-2.0255
chr7	30231502	30231592	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	chr15	80086866	80086947	protein_coding	Atf4	exon	ENSMUSG00000042406	ProperStrand	6	1	-13.6050
chr14	3929698	3929798	protein_coding	Gm3002	intron	ENSMUSG00000079399	ProperStrand	26	chr1	162968447	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-7.7477
chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	chr18	35714145	35714235	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-2.5409
chr2	112184065	112184298	protein_coding	Slc12a6	exon	ENSMUSG00000027130	ProperStrand	35	chr7	29136613	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.3165
chr19	56464462	56464479	protein_coding	Nrap	utr5	ENSMUSG00000049134	ProperStrand	32	chr4	116828377	116828453	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-9.6477
chr5	130258757	130258832	protein_coding-noncoding	Gbas	utr5	ENSMUSG00000029432	ProperStrand	1	chr11	77995188	77995239	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-inf
chrX	102569259	102569275	lincRNA	5330434G04Rik	exon	ENSMUSG00000087620	ProperStrand	29	chr14	70092176	70092856	protein_coding	Loxl2	exon	ENSMUSG00000034205	ProperStrand	28	1	-16.3391
chr4	137069123	137069200	protein_coding	Hspg2	intron	ENSMUSG00000028763	ProperStrand	812	chr17	12585979	12585995	protein_coding	Plg	exon	ENSMUSG00000059481	ProperStrand	86	1	-7.3865
chr3	104607220	104607300	protein_coding	Mov10	exon	ENSMUSG00000002227	ProperStrand	96	chr16	23110467	23110557	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.6998
chr1	173932011	173939938	protein_coding	Vangl2	exon	ENSMUSG00000026556	ProperStrand	37	chr16	23110891	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.6429
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr5	143665076	143665155	protein_coding	Actb	utr3	ENSMUSG00000029580	ProperStrand	446	1	-4.9491
chr6	52790773	52790790	protein_coding	Jazf1	intron	ENSMUSG00000063568	NonProperStrand	6	chr3	123210929	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-6.4760
chr7	54210955	54210971	protein_coding-noncoding	Uevld	utr3	ENSMUSG00000043262	NonProperStrand	2	chr15	76238851	76239340	protein_coding	Heatr7a	exon	ENSMUSG00000022558	ProperStrand	48	2	-inf
chr4	131441140	131441181	protein_coding	Srsf4	utr5	ENSMUSG00000028911	ProperStrand	101	chr5	130300470	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.6652
chr18	61569742	61569832	LTR	ORR1A4	MaLR	chr18ORR1A461569734	ProperStrand	1	chr8	83268228	83268308	LTR	ORR1B1	MaLR	chr8ORR1B183268136	ProperStrand	1	1	-inf
chr17	53827376	53828539	protein_coding	Sgol1	utr5	ENSMUSG00000023940	ProperStrand	17	chr16	23110911	23111001	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.8783
chr15	50653802	50653892	protein_coding	Trps1	exon	ENSMUSG00000038679	ProperStrand	14	chr1	89673707	89673787	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-6.0761
chr4	59639224	59639294	protein_coding	E130308A19Rik	utr5	ENSMUSG00000045071	ProperStrand	41	chr19	8800446	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-4.2442
chr4	129750095	129750112	protein_coding	Col16a1	exon	ENSMUSG00000040690	NonProperStrand	4	chr4	131908687	131908744	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-6.2660
chr8	11427556	11427572	protein_coding	Col4a2	exon	ENSMUSG00000031503	ProperStrand	74	chr11	106362638	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-6.9873
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr5	116064945	116065426	protein_coding	Gcn1l1	exon	ENSMUSG00000041638	ProperStrand	408	4	-6.3309
chr5	144936089	144936148	protein_coding	Lmtk2	exon	ENSMUSG00000038970	ProperStrand	60	chr16	23110491	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-4.3517
chr3	83570923	83570939	protein_coding	Sfrp2	exon	ENSMUSG00000027996	NonProperStrand	32	chr5	130295414	130295500	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	2	-10.5176
chr2	91771603	91771797	protein_coding	Mdk	utr5	ENSMUSG00000027239	ProperStrand	56	chr3	130399378	130406236	protein_coding	Ostc	exon	ENSMUSG00000041084	ProperStrand	10	1	-17.1015
chr6	71545619	71546711	protein_coding	Kdm3a	exon	ENSMUSG00000053470	ProperStrand	41	chr16	23111392	23111472	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.8215
chr13	117656999	117657256	protein_coding	Parp8	exon	ENSMUSG00000021725	NonProperStrand	3	chr19	8799036	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-12.1627
chr11	115024802	115024902	protein_coding	Slc9a3r1	utr5	ENSMUSG00000020733	ProperStrand	7	chr11	70049558	70049581	protein_coding	0610010K14Rik	exon	ENSMUSG00000020831	ProperStrand	16	1	-inf
chr4	152845353	152845370	protein_coding	Ajap1	intron	ENSMUSG00000039546	ProperStrand	51	chr8	124431187	124431250	protein_coding	Slc7a5	exon	ENSMUSG00000040010	ProperStrand	166	1	-11.5991
chr17	35379624	35379693	protein_coding	Ddx39b	utr5	ENSMUSG00000019432	ProperStrand	119	chr7	29136602	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.3029
chr1	105713457	105713476	LINE	Lx3_Mus	L1	chr1Lx3_Mus105713263	ProperStrand	1	chr16	23110527	23110563	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-inf
chr10	51865578	51865594	protein_coding	Ros1	exon	ENSMUSG00000019893	NonProperStrand	15	chr5	92679580	92679596	protein_coding	Ppef2	exon	ENSMUSG00000029410	ProperStrand	2	1	-inf
chr2	126949062	126949152	protein_coding	Ncaph	intron	ENSMUSG00000034906	NonProperStrand	1	chr1	154803974	154804064	protein_coding	Nmnat2	intron	ENSMUSG00000042751	ProperStrand	39	1	-inf
chrX	103395907	103398979	protein_coding	Pgk1	intron	ENSMUSG00000062070	ProperStrand	484	chr8	73419657	73419742	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	5	-2.9180
chr17	88386013	88386113	protein_coding	Msh6	exon	ENSMUSG00000005370	ProperStrand	150	chr1	152296871	152296887	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	6	-inf
chr2	71357969	71357999	protein_coding	Metap1d	intron	ENSMUSG00000041921	ProperStrand	21	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.5481
chr7	125988856	125988956	protein_coding	2310008H09Rik	utr3	ENSMUSG00000030980	ProperStrand	42	chr1	162965536	162965591	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-9.6497
chr13	54627389	54627489	protein_coding	4732471D19Rik	exon	ENSMUSG00000043183	ProperStrand	2	chr19	8798754	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-12.1939
chr9	63868722	63868739	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	chr5	121655016	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	7	-5.4675
chr12	110054335	110054359	protein_coding	Yy1	utr3	ENSMUSG00000021264	ProperStrand	31	chr10	23505152	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.2459
chr18	80389353	80389369	protein_coding	Rbfa	exon	ENSMUSG00000024570	ProperStrand	9	chr19	8799581	8799637	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-10.6341
chr4	148612358	148612458	protein_coding	Kif1b	exon	ENSMUSG00000063077	ProperStrand	60	chr7	29136525	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-6.3214
chr4	154865630	154901536	protein_coding	Gnb1	utr5	ENSMUSG00000029064	ProperStrand	69	chr10	23505193	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.0487
chr13	58495081	58495446	protein_coding	Hnrnpk	exon	ENSMUSG00000021546	ProperStrand	117	chr2	158182156	158182246	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	7	-20.1224
chr7	129142431	129143656	protein_coding	Gga2	exon	ENSMUSG00000030872	ProperStrand	65	chr19	8963097	8963182	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.1423
chr10	75322459	75322480	protein_coding	Mif	exon	ENSMUSG00000033307	ProperStrand	146	chr4	131866159	131866291	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-2.1045
chr8	112386849	112386884	antisense	Gm17344	.	ENSMUSG00000078143	ProperStrand	2	chr2	26768368	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	NonProperStrand	6	2	-inf
chr15	5193092	5193109	protein_coding	Ptger4	exon	ENSMUSG00000039942	NonProperStrand	8	chr17	35089181	35089233	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-9.5771
chr2	16278709	16278787	protein_coding	Plxdc2	utr5	ENSMUSG00000026748	ProperStrand	9	chr11	72257011	72257079	protein_coding	Mybbp1a	exon	ENSMUSG00000040463	ProperStrand	279	2	-18.8845
chr14	22489450	22489540	protein_coding	Myst4	exon	ENSMUSG00000021767	ProperStrand	151	chr11	69481345	69481425	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-1.6519
chr7	26472435	26472451	protein_coding	Tgfb1	utr5	ENSMUSG00000002603	NonProperStrand	154	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-8.5409
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr16	38522580	38522598	protein_coding	4930455C21Rik	exon	ENSMUSG00000002846	NonProperStrand	11	1	-7.8469
chr19	9004433	9005295	protein_coding	Eml3	exon	ENSMUSG00000071647	ProperStrand	19	chr10	23505190	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.1073
chr11	51912503	51912593	lincRNA	Gm16953	intron	ENSMUSG00000087101	ProperStrand	20	chr2	153091548	153091565	protein_coding	Pofut1	exon	ENSMUSG00000046020	NonProperStrand	10	3	-19.6702
chr16	97965468	97965580	protein_coding	Ripk4	exon	ENSMUSG00000005251	ProperStrand	28	chr19	8799844	8799899	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-6.4465
chr17	71144712	71144729	protein_coding	Dlgap1	intron	ENSMUSG00000003279	NonProperStrand	36	chr3	123210876	123210909	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.9411
chr5	116459721	116459811	antisense	Gm14508	.	ENSMUSG00000085376	ProperStrand	2	chr16	16487299	16487389	protein_coding-noncoding	Fgd4	utr3	ENSMUSG00000022788	NonProperStrand	1	1	-inf
chr11	77996560	77996612	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	chr11	62416951	62417024	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	3	-1.2766
chr10	79616423	79616619	protein_coding	Midn	exon	ENSMUSG00000035621	ProperStrand	36	chr16	23110986	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.8249
chr6	122273482	122273572	protein_coding	Phc1	exon	ENSMUSG00000040669	ProperStrand	158	chr9	120037933	120038013	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-2.9102
chr2	86138158	86138174	protein_coding	Olfr1052	exon	ENSMUSG00000047149	NonProperStrand	119	chr9	15119635	15119759	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.5249
chr1	52547489	52547506	protein_coding	Nab1	exon	ENSMUSG00000002881	NonProperStrand	1	chr1	88252852	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-inf
chrX	57376480	57377958	protein_coding	Mcf2	exon	ENSMUSG00000031139	ProperStrand	5	chr3	123210854	123210888	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-6.8746
chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	chr18	73693110	73693138	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-1.9623
chr6	88835979	88836055	protein_coding	Mcm2	exon	ENSMUSG00000002870	ProperStrand	83	chr18	35714154	35714244	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-2.8586
chr3	128920951	128921016	protein_coding	Pitx2	intron	ENSMUSG00000028023	ProperStrand	8	chr15	5068430	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	3	-19.4225
chr19	36966579	36966595	protein_coding	Tnks2	utr3	ENSMUSG00000024811	ProperStrand	133	chr9	40612873	40612921	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	2	-12.6881
chr16	58435561	58435578	protein_coding	Dcbld2	intron	ENSMUSG00000035107	ProperStrand	56	chr17	27698410	27700193	protein_coding	Hmga1	exon	ENSMUSG00000046711	ProperStrand	180	2	-17.7369
chr2	91460539	91460561	protein_coding	Ckap5	utr3	ENSMUSG00000040549	ProperStrand	53	chr4	131865460	131865518	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	3	-10.2460
chr11	99885311	99885327	protein_coding	Krt33b	exon	ENSMUSG00000057723	NonProperStrand	352	chr19	8799829	8799894	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	2	-3.2635
chr6	145198421	145198485	protein_coding	Kras	intron	ENSMUSG00000030265	ProperStrand	3	chr9	65221007	65221097	protein_coding	Gm514	intron	ENSMUSG00000086228	ProperStrand	8	1	-20.4785
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	13610190	13610280	protein_coding	Trim28	exon	ENSMUSG00000005566	ProperStrand	296	2	-3.0671
chr17	24858108	24858208	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr9	15118520	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	1	-5.7195
chr14	55789351	55789431	LTR	MLT2B3	ERVL	chr14MLT2B355789337	NonProperStrand	1	chr14	55789496	55789586	LTR	RLTR13D3	ERVK	chr14RLTR13D355789506	NonProperStrand	1	1	-inf
chr17	27767407	27768180	protein_coding	Rps10	utr3	ENSMUSG00000052146	ProperStrand	94	chr3	123210857	123210947	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.3802
chr10	69653798	69653841	protein_coding	Ccdc6	utr3	ENSMUSG00000048701	ProperStrand	72	chr14	76247778	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-3.8292
chr5	93600597	93600687	protein_coding	Sept11	utr3	ENSMUSG00000058013	ProperStrand	79	chr8	73419707	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	25	-inf
chr13	100090092	100090159	protein_coding	Ptcd2	utr3	ENSMUSG00000021650	ProperStrand	5	chr5	130300473	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-7.4021
chr10	98726553	98726570	protein_coding	Dusp6	exon	ENSMUSG00000019960	ProperStrand	116	chr1	59761694	59761715	snoRNA	ENSMUSG00000089093_Snord11	.	ENSMUSG00000089093	ProperStrand	193	1	-9.6468
chr9	78327852	78327915	protein_coding	Eef1a1	exon	ENSMUSG00000037742	NonProperStrand	16	chr12	55797797	55797897	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	NonProperStrand	1	1	-inf
chr9	65540681	65540775	protein_coding	Zfp609	utr3	ENSMUSG00000040524	ProperStrand	87	chr16	23111469	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.7924
chr18	75161123	75161173	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	chr11	77996585	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	3	-5.7551
chr9	115155342	115157636	protein_coding	Stt3b	exon	ENSMUSG00000032437	ProperStrand	66	chr17	35088957	35089005	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-5.6807
chr16	93764187	93764215	protein_coding	Dopey2	exon	ENSMUSG00000022946	ProperStrand	22	chr8	59991402	59991476	protein_coding	Hmgb2	exon	ENSMUSG00000054717	ProperStrand	184	1	-13.1001
chr2	157018872	157018932	protein_coding	Rbl1	exon	ENSMUSG00000027641	ProperStrand	5	chr9	121823892	121823908	protein_coding	Cyp8b1	exon	ENSMUSG00000050445	NonProperStrand	101	1	-17.3784
chr1	180885279	180885295	protein_coding	Smyd3	utr3	ENSMUSG00000055067	NonProperStrand	190	chr11	6428089	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.3120
chr1	163174398	163174419	protein_coding	Prdx6	exon	ENSMUSG00000026701	ProperStrand	23	chr10	31328217	31328236	protein_coding	Rnf217	exon	ENSMUSG00000063760	ProperStrand	33	1	-16.3962
chr13	74494656	74494673	protein_coding	Ccdc127	utr3	ENSMUSG00000021578	NonProperStrand	54	chr18	33954838	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-6.2708
chr11	87895145	87895163	protein_coding	Vezf1	exon	ENSMUSG00000018377	NonProperStrand	17	chr16	23111696	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-7.0267
chr2	146125209	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	chr5	130300498	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-0.8547
chr6	125091410	125091451	protein_coding	Nop2	exon	ENSMUSG00000038279	ProperStrand	39	chr14	31827478	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-7.8050
chr2	90235294	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	116938557	116938749	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	8	-1.9864
chr16	33243331	33243371	protein_coding	Osbpl11	utr3	ENSMUSG00000022807	ProperStrand	31	chr10	110918549	110918639	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	6	-19.8178
chr13	9168179	9168238	protein_coding	Larp4b	exon	ENSMUSG00000033499	ProperStrand	53	chr11	62418048	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-5.8005
chr17	46450621	46450707	protein_coding	Abcc10	exon	ENSMUSG00000032842	ProperStrand	20	chrX	55291889	55291912	protein_coding	Zic3	intron	ENSMUSG00000067860	NonProperStrand	7	2	-inf
chr7	136743951	136743987	protein_coding	Wdr11	exon	ENSMUSG00000042055	ProperStrand	24	chr2	77024926	77024946	protein_coding	Sestd1	utr3	ENSMUSG00000042272	NonProperStrand	10	1	-19.2433
chr11	115439889	115439932	protein_coding	Nup85	exon	ENSMUSG00000020739	ProperStrand	33	chr16	87553604	87553621	protein_coding	ORF63	utr5	ENSMUSG00000025610	ProperStrand	7	1	-18.6093
chr7	20099881	20100410	protein_coding	Trappc6a	exon	ENSMUSG00000002043	ProperStrand	3	chr3	123210852	123210952	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-8.0648
chr10	51865578	51865594	protein_coding	Ros1	exon	ENSMUSG00000019893	NonProperStrand	15	chr11	69483136	69483188	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-5.0353
chr4	144834746	144834764	protein_coding	Tnfrsf1b	intron	ENSMUSG00000028599	ProperStrand	13	chr18	35716684	35716761	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.9970
chr4	108563136	108596586	protein_coding	Rab3b	exon	ENSMUSG00000003411	ProperStrand	5	chr18	51449511	51449527	protein_coding	Prr16	intron	ENSMUSG00000073565	ProperStrand	16	1	-19.8777
chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	chr11	62418036	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-2.0277
chr5	141090405	141090422	protein_coding	Lfng	exon	ENSMUSG00000029570	NonProperStrand	92	chr11	106362304	106362372	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-5.0094
chr15	103175661	103175678	protein_coding	Itga5	utr3	ENSMUSG00000000555	NonProperStrand	8	chr9	68952416	68952433	protein_coding	Rora	intron	ENSMUSG00000032238	NonProperStrand	30	1	-18.5653
chr8	13416895	13416912	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr17	27226288	27226562	protein_coding	Itpr3	exon	ENSMUSG00000042644	ProperStrand	137	1	-4.8424
chr17	35299506	35299607	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	chr19	8798740	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	10	-0.8768
chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	chrX	84483699	84483724	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	2	-8.6235
chr18	45718263	45718280	protein_coding	Kcnn2	intron	ENSMUSG00000054477	ProperStrand	26	chr4	56899070	56901411	protein_coding	D730040F13Rik	exon	ENSMUSG00000055296	ProperStrand	48	1	-15.4359
chr17	24858769	24858822	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr2	144087324	144087449	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	5	-13.3499
chr2	83644877	83644894	protein_coding	Itgav	utr3	ENSMUSG00000027087	NonProperStrand	33	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-7.0541
chr16	90386834	90386853	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	chr7	29136602	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.4948
chr12	70286106	70286168	protein_coding	Mgat2	exon	ENSMUSG00000043998	ProperStrand	10	chr2	26768368	26768392	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-9.2243
chr6	53348772	53348788	protein_coding	9430076C15Rik	intron	ENSMUSG00000090982	NonProperStrand	1	chr17	35087942	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-inf
chr7	150255127	150255207	protein_coding	Trpm5	utr3	ENSMUSG00000009246	NonProperStrand	2	chr9	15119675	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-9.8289
chr7	6696758	6696776	SINE	B4A	B4	chr7B4A6696597	NonProperStrand	1	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr2	134897228	134897248	protein_coding	Plcb1	intron	ENSMUSG00000051177	ProperStrand	13	chr17	35089227	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-8.5579
chr11	62034378	62034468	protein_coding	Specc1	utr3	ENSMUSG00000042331	ProperStrand	11	chr16	23111374	23111454	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.1830
chr4	128899900	128899916	protein_coding	C77080	exon	ENSMUSG00000050390	NonProperStrand	28	chr10	23505152	23505246	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.4185
chr18	12172461	12172477	protein_coding	6030446N20Rik	intron	ENSMUSG00000049411	ProperStrand	235	chr17	13112531	13112581	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-2.1225
chr5	115031406	115031425	protein_coding	BC057022	intron	ENSMUSG00000041930	ProperStrand	4	chr9	15130814	15130895	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	2	-21.0704
chr17	49754656	49754675	protein_coding	Kif6	intron	ENSMUSG00000023999	ProperStrand	8	chr8	73419698	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-7.0879
chr10	57945832	57945921	protein_coding	Ranbp2	exon	ENSMUSG00000003226	ProperStrand	52	chr7	148634804	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-4.2567
chr4	134876935	134876995	protein_coding	Srrm1	utr3	ENSMUSG00000028809	ProperStrand	142	chr18	35716745	35716835	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-0.9209
chr1	162966188	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	chr5	108336362	108336497	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-0.9138
chr16	23111451	23111512	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chrX	35899956	35899973	protein_coding	Cul4b	exon	ENSMUSG00000031095	NonProperStrand	89	1	-8.2248
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr7	117945584	117945600	protein_coding	Ampd3	intron	ENSMUSG00000005686	NonProperStrand	6	1	-12.5473
chr10	122574869	122574886	protein_coding	Usp15	intron	ENSMUSG00000020124	NonProperStrand	18	chr5	151755616	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-10.1739
chr8	125731536	125731552	protein_coding	Gm20388	intron	ENSMUSG00000092329	ProperStrand	295	chr11	6428109	6428165	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-0.7612
chr19	40194227	40194250	LINE	Lx2	L1	chr19Lx240189486	ProperStrand	24	chr11	74631284	74631309	protein_coding	Mettl16	utr3	ENSMUSG00000010554	ProperStrand	13	1	-18.3007
chr5	36122930	36122946	protein_coding	Ablim2	intron	ENSMUSG00000029095	ProperStrand	36	chr19	8800357	8800447	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-4.4932
chr7	140075228	140075308	protein_coding	Fam175b	utr3	ENSMUSG00000030965	ProperStrand	4	chr12	17552972	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-10.7041
chr2	120872244	120872260	protein_coding	Tgm5	exon	ENSMUSG00000053675	NonProperStrand	163	chr8	95505795	95505812	protein_coding	Slc6a2	exon	ENSMUSG00000055368	NonProperStrand	21	1	-13.4344
chr13	65431470	65431529	LINE	L1_Mur3	L1	chr13L1_Mur365431405	NonProperStrand	3	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-inf
chr17	36066928	36067018	protein_coding	Ppp1r10	intron	ENSMUSG00000039220	ProperStrand	45	chr17	36088178	36088258	pseudogene	Gm8801	.	ENSMUSG00000092284	ProperStrand	20	13	-19.8224
chr17	33802463	33802553	protein_coding	Hnrnpm	exon	ENSMUSG00000059208	ProperStrand	56	chr8	32260337	32260417	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-4.7627
chr5	3641418	3641464	protein_coding	Gatad1	exon	ENSMUSG00000007415	ProperStrand	7	chr5	23825941	23825957	protein_coding	Kcnh2	exon	ENSMUSG00000038319	ProperStrand	242	1	-14.9455
chr16	20543772	20543838	protein_coding	Ap2m1	utr3	ENSMUSG00000022841	ProperStrand	23	chr6	115758011	115758082	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-7.3783
chr7	50976935	50976953	lincRNA	2310002F09Rik	intron	ENSMUSG00000085370	ProperStrand	9	chr7	52381737	52381758	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-11.4508
chrX	7452026	7452076	protein_coding	Otud5	utr3	ENSMUSG00000031154	ProperStrand	79	chr7	117189864	117189909	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	2	-9.2535
chr10	98478278	98478294	protein_coding	Atp2b1	exon	ENSMUSG00000019943	NonProperStrand	5	chr5	21270693	21270709	protein_coding	Dnajc2	intron	ENSMUSG00000029014	NonProperStrand	5	1	-19.0779
chr4	20818522	20818559	LTR	MTEa	MaLR	chr4MTEa20818434	ProperStrand	2	chr15	98350146	98350201	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	2	-inf
chr11	21048174	21048190	protein_coding	Peli1	exon	ENSMUSG00000020134	ProperStrand	69	chr3	95980318	95980410	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	4	-18.8856
chr11	78156034	78156056	protein_coding	Pigs	utr3	ENSMUSG00000041958	ProperStrand	31	chr18	35716789	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.3259
chr12	77893702	77893786	protein_coding	Gpx2	exon	ENSMUSG00000042808	ProperStrand	3	chr4	131908356	131908396	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-inf
chr3	153573527	153573571	snoRNA	ENSMUSG00000064731_Snord45b	.	ENSMUSG00000064731	ProperStrand	205	chr19	8963027	8963113	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-1.2590
chr2	144087380	144087463	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	chr3	95980293	95980383	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-0.8968
chr6	49200911	49200927	protein_coding	Tra2a	exon	ENSMUSG00000029817	ProperStrand	54	chr19	8798484	8798535	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-5.4169
chr6	125080124	125080225	protein_coding	Chd4	utr3	ENSMUSG00000063870	ProperStrand	303	chr18	35714255	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	7	-9.1753
chr17	27559700	27559717	protein_coding	Grm4	utr3	ENSMUSG00000063239	ProperStrand	147	chr4	131865457	131865516	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-2.3934
chr7	114212986	114213012	LINE	Lx4A	L1	chr7Lx4A114212851	NonProperStrand	2	chr3	108357291	108357381	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-11.9197
chr13	3550259	3550288	protein_coding	Gdi2	exon	ENSMUSG00000021218	ProperStrand	49	chr4	131865856	131865960	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-7.9432
chr2	90235294	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr15	91610351	91610368	protein_coding	Lrrk2	exon	ENSMUSG00000036273	NonProperStrand	9	1	-8.2671
chr5	115120009	115120029	protein_coding	Gltp	utr3	ENSMUSG00000011884	ProperStrand	10	chr7	148634768	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	3	-17.3624
chr10	82110707	82110741	protein_coding	Tdg	exon	ENSMUSG00000034674	ProperStrand	42	chr11	69483194	69483250	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.0756
chr8	114292485	114292510	protein_coding	Cfdp1	utr3	ENSMUSG00000031954	ProperStrand	32	chr11	6428087	6428156	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.3666
chr2	180716452	180716542	protein_coding	Arfgap1	utr3	ENSMUSG00000027575	ProperStrand	18	chr7	116663712	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	4	-15.2475
chr17	88079400	88081895	protein_coding	Msh2	exon	ENSMUSG00000024151	ProperStrand	124	chr17	66798457	66798473	protein_coding	1110012J17Rik	exon	ENSMUSG00000052105	NonProperStrand	38	1	-12.7789
chr14	31990135	31990208	protein_coding	Nisch	exon	ENSMUSG00000021910	ProperStrand	125	chr18	71515822	71515839	protein_coding	Dcc	intron	ENSMUSG00000060534	NonProperStrand	29	1	-13.3111
chr4	131865866	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr7	127979023	127979046	tRNA	tRNA861-LeuTAG	.	1239306	ProperStrand	49	1	-2.0906
chr5	38651670	38651686	protein_coding	Tmem128	exon	ENSMUSG00000067365	ProperStrand	4	chr8	32260373	32260426	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-10.2255
chr17	84461112	84461202	LTR	MLT1G1	MaLR	chr17MLT1G184461023	ProperStrand	1	chr17	84460887	84460977	LTR	ORR1A2	MaLR	chr17ORR1A284460700	NonProperStrand	1	1	-inf
chr7	13516151	13516190	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr4	32749937	32749979	protein_coding	Mdn1	exon	ENSMUSG00000058006	ProperStrand	184	2	-10.4077
chr1	182745764	182745781	antisense	Gm16067	.	ENSMUSG00000073485	ProperStrand	25	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.9342
chr4	141171220	141171300	protein_coding-noncoding	Tmem82	utr3	ENSMUSG00000043085	ProperStrand	2	chr12	106269284	106269374	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-11.4969
chr5	30975684	30975719	protein_coding	Cenpa	exon	ENSMUSG00000029177	ProperStrand	18	chr2	26494708	26494775	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.4011
chr2	156596265	156596281	LINE	Lx6	L1	chr2Lx6156595723	NonProperStrand	1	chr5	124396401	124396417	protein_coding	Ccdc62	exon	ENSMUSG00000061882	ProperStrand	5	1	-inf
chr16	84833681	84833771	protein_coding	Atp5j	intron	ENSMUSG00000022890	ProperStrand	4	chr7	116664838	116664918	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-7.9535
chr1	192777775	192777792	protein_coding	Vash2	intron	ENSMUSG00000037568	ProperStrand	34	chr15	79910853	79910899	protein_coding	Rpl3	exon	ENSMUSG00000060036	ProperStrand	8342	1	-4.6681
chr1	187203498	187203529	protein_coding	Eprs	exon	ENSMUSG00000026615	ProperStrand	149	chr7	117189955	117190045	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-1.7837
chr1	155287328	155287354	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	chr4	122968595	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-2.2509
chr9	65550538	65550628	protein_coding	Zfp609	exon	ENSMUSG00000040524	ProperStrand	87	chr13	23837308	23837388	protein_coding	Hist1h3c	utr5	ENSMUSG00000069310	ProperStrand	26	1	-14.2496
chr4	151368477	151368495	protein_coding	Phf13	intron	ENSMUSG00000047777	ProperStrand	38	chr19	8799022	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-6.7367
chr2	93638348	93638412	protein_coding	Ext2	exon	ENSMUSG00000027198	ProperStrand	49	chr19	59047869	59047886	protein_coding	4930506M07Rik	utr3	ENSMUSG00000041362	NonProperStrand	21	1	-15.8419
mmu-miR-6516-5p	6	22	miRNA	mmu-miR-6516-5p	.	mmu-miR-6516-5p	ProperStrand	2	chr11	116938703	116938752	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-13.5975
chr14	47888432	47889829	protein_coding	Wdhd1	exon	ENSMUSG00000037572	ProperStrand	35	chr14	61398407	61398423	protein_coding	C1qtnf9	exon	ENSMUSG00000071347	ProperStrand	187	1	-12.1223
chr8	3605132	3605224	protein_coding	Camsap3	intron	ENSMUSG00000044433	ProperStrand	86	chr10	23505150	23505236	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	9	-12.5832
chr10	122574869	122574886	protein_coding	Usp15	intron	ENSMUSG00000020124	NonProperStrand	18	chr7	30042849	30042909	protein_coding	Spint2	intron	ENSMUSG00000074227	ProperStrand	82	1	-15.1197
chr15	34061033	34064139	protein_coding	Mtdh	exon	ENSMUSG00000022255	ProperStrand	37	chr11	69481335	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	6	-19.8644
chr7	133996292	133996383	protein_coding	Ino80e	exon	ENSMUSG00000030689	ProperStrand	7	chr11	97642952	97643008	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-6.6269
chr2	179915842	179915909	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr8	13837567	13837583	protein_coding	AF366264	exon	ENSMUSG00000057116	ProperStrand	7	1	-14.1262
chr6	113419923	113419940	protein_coding	Il17re	exon	ENSMUSG00000043088	NonProperStrand	12	chr5	130300461	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	5	-20.3502
chr17	35152303	35152360	protein_coding	Vars	exon	ENSMUSG00000007029	ProperStrand	121	chr17	35087895	35087964	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-3.8621
chr2	119635271	119635728	protein_coding	Tyro3	exon	ENSMUSG00000027298	ProperStrand	35	chr18	35716863	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.1046
chrX	103170686	103170786	protein_coding	Magt1	intron	ENSMUSG00000031232	ProperStrand	12	chr16	23110981	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.4686
chr11	78313939	78313956	protein_coding	Vtn	exon	ENSMUSG00000017344	ProperStrand	188	chr17	11032985	11033001	protein_coding	Pacrg	utr5	ENSMUSG00000037196	NonProperStrand	6	1	-15.7579
chr15	100406472	100406489	protein_coding	Pou6f1	utr3	ENSMUSG00000009739	NonProperStrand	4	chr17	84683258	84683274	protein_coding	Thada	intron	ENSMUSG00000024251	ProperStrand	47	1	-20.2887
chr14	51427116	51427194	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr15	76489692	76489780	protein_coding	Cyhr1	utr5	ENSMUSG00000053929	ProperStrand	16	1	-9.8813
chr7	123706977	123707067	LTR	RLTR19-int	ERVK	chr7RLTR19-int123706713	ProperStrand	1	chr7	123707633	123707723	LTR	RMER12	ERVK	chr7RMER12123707403	NonProperStrand	1	1	-inf
chr4	71861429	71861446	protein_coding	Tle1	utr5	ENSMUSG00000008305	ProperStrand	16	chr16	23110914	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.9771
chr17	20504247	20504264	protein_coding	Vmn2r107	intron	ENSMUSG00000056910	NonProperStrand	7	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-6.1472
chr5	34234244	34234262	protein_coding	Whsc1	utr5	ENSMUSG00000057406	ProperStrand	409	chr18	35714144	35714261	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-1.2166
chr4	32792124	32792167	protein_coding	Mdn1	intron	ENSMUSG00000058006	ProperStrand	184	chr10	39978282	39978372	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-3.3370
chr18	12692470	12692487	protein_coding	Lama3	exon	ENSMUSG00000024421	ProperStrand	20	chr16	23110913	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-3.0614
chr5	137323473	137358733	protein_coding	Emid2	exon	ENSMUSG00000004415	NonProperStrand	38	chr1	88253217	88253238	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	1	-8.2716
chr13	9833577	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr8	97991980	97991996	protein_coding	Csnk2a2	intron	ENSMUSG00000046707	ProperStrand	21	1	-7.0324
chr8	113159341	113159360	protein_coding	Vac14	exon	ENSMUSG00000010936	NonProperStrand	23	chr11	68886962	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	9	-19.5226
chr11	69548937	69549027	protein_coding	Polr2a	exon	ENSMUSG00000005198	ProperStrand	200	chr9	15119646	15119726	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-0.8394
chr10	62302085	62355433	protein_coding	Tet1	exon	ENSMUSG00000047146	ProperStrand	286	chr7	116664794	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	4	-2.6346
chr7	118219575	118219610	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	chr13	22006719	22006760	tRNA	tRNA85-LeuCAA	.	1563847	ProperStrand	54	1	-4.3707
chr4	43703838	43703855	protein_coding	Tmem8b	utr3	ENSMUSG00000078716	NonProperStrand	3	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-15.8367
chr10	127428422	127428438	protein_coding	Hsd17b6	exon	ENSMUSG00000025396	NonProperStrand	68	chr11	116938556	116938686	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-5.9128
chr17	45707318	45707396	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr17	66468411	66468427	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	1	-3.4166
chr3	136526736	136526753	protein_coding	Ppp3ca	intron	ENSMUSG00000028161	NonProperStrand	120	chr5	151755614	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-6.3648
chr4	108237864	108240070	protein_coding	Prpf38a	exon	ENSMUSG00000063800	ProperStrand	10	chr16	23111758	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	6	-20.4744
chr10	79316213	79316230	lincRNA	E130317F20Rik	exon	ENSMUSG00000091994	NonProperStrand	97	chr10	118650747	118650847	protein_coding	Cand1	exon	ENSMUSG00000020114	ProperStrand	76	1	-11.8729
chr6	49195505	49213791	protein_coding	Tra2a	intron	ENSMUSG00000029817	ProperStrand	54	chr16	23110827	23110992	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-1.7104
chr14	56357942	56358008	protein_coding	Dhrs1	utr3	ENSMUSG00000002332	ProperStrand	14	chr15	98350146	98350182	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-7.6583
chr16	28427797	28427817	protein_coding	Fgf12	intron	ENSMUSG00000022523	ProperStrand	14	chr4	117317816	117317906	protein_coding	Eri3	intron	ENSMUSG00000033423	ProperStrand	246	11	-22.2856
chr1	193362039	193362126	protein_coding	Dtl	utr3	ENSMUSG00000037474	ProperStrand	27	chr19	8963022	8963090	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-6.2973
chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	chr2	153092150	153092207	protein_coding	Pofut1	utr3	ENSMUSG00000046020	ProperStrand	17	1	-11.7474
chr2	32489905	32489963	protein_coding	Ak1	utr3	ENSMUSG00000026817	ProperStrand	33	chr10	23505152	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.1417
chr1	58651578	58651635	protein_coding	Ndufb3	intron	ENSMUSG00000026032	ProperStrand	14	chr16	23110524	23110575	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.1866
chr2	90235299	90235346	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	148844628	148844683	protein_coding	Caprin2	utr5	ENSMUSG00000030309	ProperStrand	12	2	-12.3824
chr5	8088036	8088053	protein_coding	Adam22	exon	ENSMUSG00000040537	ProperStrand	16	chr16	23111777	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-10.5086
chr1	71646913	71698132	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr16	23110454	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	15	-5.3731
chr5	135132158	135132202	protein_coding	Limk1	utr3	ENSMUSG00000029674	ProperStrand	10	chr9	120038562	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-6.5201
chr14	51427119	51427219	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr11	62416577	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	4	-2.3807
chr2	32615106	32615199	protein_coding	Tor2a	exon	ENSMUSG00000009563	ProperStrand	8	chr12	86974397	86974416	protein_coding	Jdp2	intron	ENSMUSG00000034271	ProperStrand	19	1	-18.7527
chr7	99806646	99806736	protein_coding	Pcf11	exon	ENSMUSG00000041328	ProperStrand	27	chr16	23110911	23110991	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.1875
chr5	128076288	128076304	protein_coding	Slc15a4	utr3	ENSMUSG00000029416	ProperStrand	49	chr3	123210921	123210972	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.4031
chr7	31371177	31371238	protein_coding	Wbp7	exon	ENSMUSG00000006307	ProperStrand	180	chr9	20316598	20316682	protein_coding	Zfp266	intron	ENSMUSG00000060510	ProperStrand	20	1	-13.3375
chr10	128675332	128675349	protein_coding	Olfr774	exon	ENSMUSG00000072403	NonProperStrand	3	chr4	131908356	131908410	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-12.4687
chr4	43505840	43505930	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr12	81272780	81272856	protein_coding	Actn1	exon	ENSMUSG00000015143	ProperStrand	128	1	-1.7936
chr2	118611946	118611962	protein_coding	Disp2	exon	ENSMUSG00000040035	NonProperStrand	204	chr1	72758259	72758278	protein_coding	Rpl37a	exon	ENSMUSG00000046330	ProperStrand	94	2	-15.6813
chr16	58729756	58729778	protein_coding	Cldn25	exon	ENSMUSG00000022744	ProperStrand	4	chr16	23111689	23111791	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-7.1763
chr1	102076739	102076766	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	chr9	64022860	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-4.2401
chr17	47110965	47112739	protein_coding	Ubr2	exon	ENSMUSG00000023977	ProperStrand	172	chr7	29136556	29136646	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-2.7856
chr8	87611186	87612512	protein_coding	Man2b1	exon	ENSMUSG00000005142	ProperStrand	27	chr18	35716697	35716777	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.5820
chr9	58137559	58137639	protein_coding	Loxl1	intron	ENSMUSG00000032334	NonProperStrand	13	chr9	78198305	78198395	protein_coding	Gsta2	intron	ENSMUSG00000057933	ProperStrand	3	1	-inf
chr5	143137045	143139074	protein_coding	Wipi2	exon	ENSMUSG00000029578	ProperStrand	49	chr15	34370547	34370637	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-3.9265
chr19	5105062	5105103	protein_coding	Rab1b	intron	ENSMUSG00000024870	ProperStrand	133	chr19	8799835	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	4	-11.4985
chr2	38280204	38280222	lincRNA	Gm13589	intron	ENSMUSG00000085950	NonProperStrand	31	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-9.0544
chr1	183853750	183853767	protein_coding	Enah	exon	ENSMUSG00000022995	NonProperStrand	33	chr4	131908809	131908869	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.1302
chrX	39029535	39029551	protein_coding	Gria3	utr3	ENSMUSG00000001986	ProperStrand	32	chr10	23505151	23505248	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-8.3093
chr2	130104563	130104636	protein_coding	Nop56	utr3	ENSMUSG00000027405	ProperStrand	125	chr5	115593972	115594062	protein_coding	Mlec	utr3	ENSMUSG00000048578	ProperStrand	47	1	-12.3332
chr1	45871529	45873336	protein_coding	Wdr75	exon	ENSMUSG00000025995	ProperStrand	24	chr3	123210854	123210886	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.6860
chr3	90063891	90064075	protein_coding	Crtc2	exon	ENSMUSG00000027936	ProperStrand	8	chr11	62418015	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-9.6511
chr9	15120983	15121083	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	chr5	130300435	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	26	-inf
chr11	42440243	42440259	protein_coding	Gabrb2	exon	ENSMUSG00000007653	ProperStrand	248	chr1	162968441	162968511	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-3.3717
chr4	153386425	153386488	protein_coding	Lrrc47	exon	ENSMUSG00000029028	ProperStrand	30	chr4	53873626	53873644	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	1	-10.4433
mmu-miR-6238	1	22	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	4	-5.5484
chr18	61244316	61244392	protein_coding	Pdgfrb	utr3	ENSMUSG00000024620	ProperStrand	5	chr6	24569549	24569639	protein_coding	Wasl	exon	ENSMUSG00000029684	ProperStrand	25	1	-18.7681
mmu-miR-677-3p	0	25	miRNA	mmu-miR-677-3p	.	mmu-miR-677-3p	ProperStrand	5	chr5	93600389	93600489	protein_coding	Sept11	utr3	ENSMUSG00000058013	ProperStrand	79	1	-17.6685
chr19	8989040	8989056	protein_coding	Ganab	exon	ENSMUSG00000071650	NonProperStrand	2	chr12	88778688	88778739	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-13.9398
chr19	55816842	55816858	protein_coding	Tcf7l2	exon	ENSMUSG00000024985	ProperStrand	103	chr7	151622134	151622182	protein_coding	Cttn	utr3	ENSMUSG00000031078	ProperStrand	33	1	-13.4353
chr15	77647801	77647825	protein_coding	Myh9	intron	ENSMUSG00000022443	ProperStrand	570	chr6	121363027	121363043	protein_coding	Iqsec3	exon	ENSMUSG00000040797	NonProperStrand	139	1	-7.1334
chr5	100855903	100855946	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr1	174492230	174492246	protein_coding	Vsig8	exon	ENSMUSG00000049598	ProperStrand	27	1	-8.2366
chr4	33335321	33335354	protein_coding	Pnrc1	exon	ENSMUSG00000040128	ProperStrand	27	chr8	32260348	32260438	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-6.1942
chr1	194571800	194571879	snRNA	ENSMUSG00000064881_U5	.	ENSMUSG00000064881	ProperStrand	187	chr14	31827477	31827516	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-4.7226
chr2	34629445	34629561	protein_coding	Hspa5	exon	ENSMUSG00000026864	ProperStrand	181	chr7	116663715	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-0.8755
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	1	-4.0725
chr4	122968584	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	chr14	76247711	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	12	-4.2469
chr2	9978429	9980650	protein_coding	Atp5c1	exon	ENSMUSG00000025781	ProperStrand	138	chr16	23110541	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-2.2793
chr13	114113333	114113350	protein_coding	BC067074	exon	ENSMUSG00000021763	NonProperStrand	62	chr18	35716696	35716761	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.1157
chr4	114741487	114741504	protein_coding	Tal1	utr3	ENSMUSG00000028717	NonProperStrand	69	chr4	131908689	131908751	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.0398
chr14	56183570	56183588	protein_coding	Dcaf11	exon	ENSMUSG00000022214	ProperStrand	1	chr19	8963024	8963124	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-inf
chr4	123074530	123074562	protein_coding	Macf1	exon	ENSMUSG00000028649	ProperStrand	320	chr9	120037897	120037974	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	3	-4.9020
chr2	26489318	26489379	protein_coding	Fam69b	intron	ENSMUSG00000036186	ProperStrand	8	chr18	35716806	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-14.3467
chr4	147865594	147898641	protein_coding	Mtor	exon	ENSMUSG00000028991	ProperStrand	65	chr7	148634776	148634839	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-6.4737
chr10	93311223	93311239	protein_coding	Usp44	utr3	ENSMUSG00000020020	NonProperStrand	2	chr7	116663645	116663749	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-9.6916
chr8	72287172	72287188	protein_coding	Zfp866	utr3	ENSMUSG00000043090	NonProperStrand	134	chr15	34370545	34370605	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-2.1417
chr2	26968465	26968532	protein_coding	Fam163b	intron	ENSMUSG00000009216	ProperStrand	7	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-12.1432
chr2	76582623	76582705	protein_coding	Ttn	exon	ENSMUSG00000051747	ProperStrand	66	chr1	89673606	89673696	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	5	-13.5732
chr17	4082507	4082529	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr13	38069343	38069423	protein_coding	Ssr1	utr3	ENSMUSG00000021427	ProperStrand	65	4	-20.2754
chr13	84319718	84319735	LINE	L1M5	L1	chr13L1M584319629	ProperStrand	1	chr5	37742412	37754757	protein_coding	Evc2	exon	ENSMUSG00000050248	NonProperStrand	2	1	-inf
chr16	38498983	38499026	protein_coding	4930455C21Rik	utr3	ENSMUSG00000002846	ProperStrand	1	chr2	153594480	153594497	protein_coding	Mapre1	utr3	ENSMUSG00000027479	NonProperStrand	2	1	-inf
chr18	14811402	14811482	protein_coding	Ss18	intron	ENSMUSG00000037013	ProperStrand	24	chr2	144087324	144087365	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-8.3819
chr11	99885311	99885327	protein_coding	Krt33b	exon	ENSMUSG00000057723	NonProperStrand	352	chr7	116663692	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-1.2020
chr10	61188798	61189124	protein_coding	Aifm2	exon	ENSMUSG00000020085	NonProperStrand	2	chr1	74722201	74722265	protein_coding	Ttll4	intron	ENSMUSG00000033257	ProperStrand	24	1	-inf
chr7	135116094	135116122	protein_coding	Fus	exon	ENSMUSG00000030795	ProperStrand	162	chr17	35001519	35001535	protein_coding	Gm20547	exon	ENSMUSG00000092511	ProperStrand	9	1	-15.2109
chr4	117885439	117886077	protein_coding	Ptprf	exon	ENSMUSG00000033295	ProperStrand	337	chr1	181027187	181027205	protein_coding	Smyd3	intron	ENSMUSG00000055067	ProperStrand	231	1	-7.1666
chr13	76341035	76341054	protein_coding	Fam81b	intron	ENSMUSG00000078966	NonProperStrand	220	chr4	116862619	116862662	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	1	-6.2628
chr10	114943477	114943494	protein_coding	Lgr5	intron	ENSMUSG00000020140	NonProperStrand	13	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.5141
chr9	48801946	48801972	protein_coding	Usp28	intron	ENSMUSG00000032267	ProperStrand	63	chr19	8798484	8798553	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	3	-12.0301
chr17	88116911	88116971	protein_coding	Msh2	exon	ENSMUSG00000024151	ProperStrand	124	chr11	68886980	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	2	-4.8924
chr8	72287172	72287188	protein_coding	Zfp866	utr3	ENSMUSG00000043090	NonProperStrand	134	chr1	91358413	91358430	protein_coding	Agap1	intron	ENSMUSG00000055013	ProperStrand	229	1	-9.0171
chr19	7060328	7060803	protein_coding	Vegfb	exon	ENSMUSG00000024962	ProperStrand	24	chr16	23111738	23111769	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.4982
chr18	22124504	22124521	protein_coding	4921528I01Rik	intron	ENSMUSG00000024306	ProperStrand	5	chr4	130305550	130305619	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	1	-15.0658
chr2	129998665	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr15	73419990	73435915	protein_coding	Slc45a4	exon	ENSMUSG00000079020	ProperStrand	127	1	-6.6192
chr2	77417938	77417956	protein_coding	Zfp385b	intron	ENSMUSG00000027016	ProperStrand	15	chr8	113263317	113263365	protein_coding	Mtss1l	utr3	ENSMUSG00000033763	ProperStrand	12	1	-19.6590
chr15	102495514	102496196	protein_coding	Atp5g2	exon	ENSMUSG00000062683	ProperStrand	32	chr4	131908688	131908896	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-10.7870
chr11	88870493	88870541	protein_coding	Trim25	exon	ENSMUSG00000000275	ProperStrand	50	chr16	23111448	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-4.4645
chr14	56371463	56371677	protein_coding	2610027L16Rik	exon	ENSMUSG00000019297	ProperStrand	43	chr13	49736675	49742942	protein_coding	Cenpp	exon	ENSMUSG00000021391	ProperStrand	3	1	-inf
chr17	34975327	34975529	protein_coding	Dom3z	exon	ENSMUSG00000040482	ProperStrand	4	chr7	118219575	118219616	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-9.7412
chr8	72566913	72566931	protein_coding	Sugp1	utr5	ENSMUSG00000011306	NonProperStrand	5	chr19	8799581	8799635	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-11.9129
chr1	4879588	4879643	protein_coding	Tcea1	exon	ENSMUSG00000033813	ProperStrand	24	chr11	68886934	68887024	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-5.9266
chr6	35489597	35489671	protein_coding	Mtpn	utr5	ENSMUSG00000029840	ProperStrand	18	chr8	35882652	35882668	protein_coding	Dusp4	utr3	ENSMUSG00000031530	NonProperStrand	3	1	-inf
chr18	35339342	35339414	protein_coding	Ctnna1	exon	ENSMUSG00000037815	ProperStrand	115	chr4	131865381	131865471	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-2.8158
chr5	76329505	76329521	protein_coding	Kdr	utr3	ENSMUSG00000062960	NonProperStrand	9	chr1	162965531	162965587	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-7.0004
chr4	116875149	116875249	snRNA	ENSMUSG00000070228_U5	.	ENSMUSG00000070228	ProperStrand	131	chr14	76247767	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-2.7460
chr12	78021944	78022035	protein_coding	Fntb	utr3	ENSMUSG00000033373	ProperStrand	176	chr5	74489618	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	3	-5.2747
chrX	71041531	71041785	protein_coding	Pdzd4	exon	ENSMUSG00000002006	ProperStrand	20	chr15	98356833	98356913	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	1	-9.9723
chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	chr7	29136619	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-0.9733
chr3	95003719	95003809	protein_coding-noncoding	Gabpb2	utr3	ENSMUSG00000038766	NonProperStrand	2	chr3	95004087	95004177	protein_coding	Gabpb2	exon	ENSMUSG00000038766	NonProperStrand	1	1	-inf
chr3	95142950	95143927	protein_coding	Setdb1	exon	ENSMUSG00000015697	ProperStrand	23	chr10	80644019	80644068	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-8.0160
chr11	102565613	102565664	SINE	B3A	B2	chr11B3A102565549	NonProperStrand	1	chr5	23151876	23151893	protein_coding	Srpk2	intron	ENSMUSG00000062604	NonProperStrand	38	1	-inf
chr11	72785659	72785675	protein_coding	Atp2a3	exon	ENSMUSG00000020788	ProperStrand	29	chr15	79908929	79908956	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-6.9123
chr8	86431058	86431108	protein_coding	Lphn1	intron	ENSMUSG00000013033	ProperStrand	221	chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	1	-6.5937
chr2	73661304	73661363	protein_coding	Atf2	exon	ENSMUSG00000027104	ProperStrand	37	chr1	162965571	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.1770
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr8	87525135	87525238	protein_coding	Hook2	exon	ENSMUSG00000052566	ProperStrand	204	1	-3.5646
chr12	60141363	60141414	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	chr9	15119280	15119383	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	3	-1.0635
mmu-miR-1949	5	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr6	115758010	115758141	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	2	-2.0099
chr2	103588240	103588355	protein_coding	Nat10	exon	ENSMUSG00000027185	NonProperStrand	64	chr11	6428059	6428088	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.0760
chr11	62366457	62366504	protein_coding	Ubb	exon	ENSMUSG00000019505	ProperStrand	32	chr2	166890531	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-8.8194
chr5	58949706	58949724	LINE	Lx5	L1	chr5Lx558949410	ProperStrand	14	chr1	63629043	63629098	protein_coding	Adam23	intron	ENSMUSG00000025964	ProperStrand	59	1	-16.3036
chr18	60963611	60963628	protein_coding	Cd74	exon	ENSMUSG00000024610	ProperStrand	2	chr11	55296195	55296330	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-13.6189
chr19	47202451	47202551	protein_coding	Pdcd11	exon	ENSMUSG00000025047	ProperStrand	137	chr1	162965576	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	5	-9.4212
chr1	162967117	162967178	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	chr15	79908956	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	5	-7.6287
chr16	84723423	84723523	protein_coding	Mrpl39	intron	ENSMUSG00000022889	ProperStrand	32	chr7	116664858	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.6812
chr10	36858468	36858485	protein_coding	Marcks	utr5	ENSMUSG00000069662	NonProperStrand	2	chr5	121655100	121655129	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-11.0755
chr1	103870870	103870902	LINE	Lx3_Mus	L1	chr1Lx3_Mus103870803	ProperStrand	3	chr11	69481335	69481425	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	3	-inf
chr11	83106764	83106812	processed_transcript	RP23-381B19.7	.	ENSMUSG00000093483	ProperStrand	2	chr17	34747537	34747555	protein_coding	Agpat1	exon	ENSMUSG00000034254	NonProperStrand	39	2	-inf
chr7	106986529	106986545	SINE	B4A	B4	chr7B4A106986446	NonProperStrand	2	chr18	33954876	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-inf
chr19	43881629	43881741	protein_coding	Abcc2	exon	ENSMUSG00000025194	ProperStrand	3	chr2	32818904	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-11.7908
chr1	155067273	155094550	protein_coding	Lamc1	utr3	ENSMUSG00000026478	ProperStrand	239	chr11	6428070	6428155	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-1.9897
chr10	60294076	60294092	protein_coding	Unc5b	utr5	ENSMUSG00000020099	NonProperStrand	2	chr16	23110529	23110558	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-9.6327
chr2	90235340	90235360	LINE	L1Md_F3	L1	chr2L1Md_F390234647	ProperStrand	24	chr8	32260335	32260426	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-6.4297
chr16	21926518	21926543	protein_coding	Map3k13	exon	ENSMUSG00000033618	ProperStrand	16	chr7	29136628	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-11.6124
chr6	128313071	128313087	protein_coding	Foxm1	utr5	ENSMUSG00000001517	NonProperStrand	66	chr4	131865392	131865503	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	4	-12.5423
chr10	107698082	107698370	protein_coding	Ppp1r12a	exon	ENSMUSG00000019907	ProperStrand	65	chr15	5067406	5067692	protein_coding	Rpl37	exon	ENSMUSG00000041841	ProperStrand	69	1	-12.8721
chr6	39546558	39546575	protein_coding	Ndufb2	exon	ENSMUSG00000002416	ProperStrand	1	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-inf
chr18	46757092	46757109	protein_coding	Tmed7	utr5	ENSMUSG00000033184	ProperStrand	15	chr11	97642952	97643042	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-5.0602
chr5	136265087	136265123	protein_coding	Mdh2	exon	ENSMUSG00000019179	ProperStrand	50	chrX	7182489	7182506	protein_coding	Ccdc22	utr5	ENSMUSG00000031143	NonProperStrand	51	1	-14.0102
chr1	155287316	155287354	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	chr9	64023228	64023287	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	1	-4.2070
chr8	111509625	111509715	LINE	L1M4c	L1	chr8L1M4c111509113	NonProperStrand	1	chr8	111509877	111509967	SINE	B4A	B4	chr8B4A111509764	NonProperStrand	1	1	-inf
chr3	14603729	14603795	protein_coding	E2f5	exon	ENSMUSG00000027552	ProperStrand	10	chr4	131908713	131908797	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.3231
chr15	82008002	82009174	protein_coding	Srebf2	exon	ENSMUSG00000022463	ProperStrand	592	chr17	13112532	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	2	-1.6606
chr11	51932683	51932716	protein_coding	Ppp2ca	exon	ENSMUSG00000020349	ProperStrand	22	chr2	158185530	158185644	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-8.4984
chr2	126929746	126929823	protein_coding	Ncaph	utr3	ENSMUSG00000034906	ProperStrand	43	chr14	55329702	55330293	protein_coding	Cebpe	exon	ENSMUSG00000052435	NonProperStrand	14	1	-17.1673
chr15	10504979	10504995	protein_coding	Rai14	exon	ENSMUSG00000022246	ProperStrand	180	chr9	15119631	15119726	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-0.9647
chr8	64017614	64028377	protein_coding	Palld	exon	ENSMUSG00000058056	NonProperStrand	125	chr16	23111397	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	5	-3.7524
chr8	96474250	96474329	protein_coding	Gnao1	exon	ENSMUSG00000031748	ProperStrand	7	chr11	87172190	87172206	protein_coding	Ppm1e	exon	ENSMUSG00000046442	ProperStrand	112	1	-16.5302
chr17	74694358	74694382	Low_complexity	GC_rich	Low_complexity	chr17GC_rich74694344	NonProperStrand	3	chr1	162966002	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-16.4175
chr1	181027187	181027205	protein_coding	Smyd3	intron	ENSMUSG00000055067	ProperStrand	231	chr17	26360445	26360562	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	1	-7.3381
chr15	36528991	36529032	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr3	113827103	113827119	protein_coding	Col11a1	utr3	ENSMUSG00000027966	NonProperStrand	139	1	-6.2173
chrX	84483699	84483715	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr19	9043691	9043929	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	1	-4.4805
chr15	74392750	74392768	protein_coding	Bai1	intron	ENSMUSG00000034730	NonProperStrand	56	chr12	17552960	17553029	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-5.2233
chr7	148195607	148195623	protein_coding	Ifitm3	utr3	ENSMUSG00000025492	NonProperStrand	20	chr11	77996558	77996622	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-8.2930
chr6	122677978	122678058	protein_coding	Slc2a3	utr3	ENSMUSG00000003153	ProperStrand	682	chr11	62416994	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	3	-4.6740
chr2	180376785	180376838	protein_coding	Tcfl5	exon	ENSMUSG00000038932	ProperStrand	11	chr7	52382752	52382791	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	2	-16.1879
chr7	29947112	29947172	protein_coding	Spred3	exon	ENSMUSG00000037239	ProperStrand	10	chr9	64143745	64143830	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-11.4282
chr13	46796982	46797082	protein_coding	Nup153	exon	ENSMUSG00000021374	ProperStrand	69	chr4	155115222	155115269	protein_coding	Atad3a	utr3	ENSMUSG00000029036	ProperStrand	28	1	-14.5670
chr12	111854808	111854993	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr9	66566867	66566890	protein_coding	Car12	intron	ENSMUSG00000032373	ProperStrand	20	1	-10.7755
chr5	76659331	76659347	protein_coding	Clock	exon	ENSMUSG00000029238	NonProperStrand	64	chr16	23110454	23110557	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-4.1786
chr2	25289589	25289897	protein_coding	Abca2	exon	ENSMUSG00000026944	ProperStrand	57	chr10	117227045	117227061	protein_coding	Nup107	exon	ENSMUSG00000052798	NonProperStrand	66	1	-13.2240
chr12	13227181	13227255	protein_coding	Ddx1	exon	ENSMUSG00000037149	ProperStrand	47	chr2	75499967	75500067	protein_coding	Hnrnpa3	exon	ENSMUSG00000059005	ProperStrand	289	1	-10.6544
chr2	26493390	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr19	44111411	44111430	protein_coding	Erlin1	utr3	ENSMUSG00000025198	ProperStrand	9	2	-16.0022
chr7	91047501	91047598	protein_coding	Mesdc2	utr3	ENSMUSG00000038503	ProperStrand	19	chr4	131908236	131908296	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-11.6032
chr10	39541032	39541083	protein_coding	Rev3l	exon	ENSMUSG00000019841	ProperStrand	39	chr7	117166745	117166835	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	2	-9.2534
chr5	144948507	144948524	protein_coding	Lmtk2	utr3	ENSMUSG00000038970	NonProperStrand	10	chr9	15119967	15120023	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-10.9040
chr9	24549588	24549632	protein_coding	Tbx20	intron	ENSMUSG00000031965	NonProperStrand	110	chr9	78328448	78328471	protein_coding	Eef1a1	utr5	ENSMUSG00000037742	ProperStrand	1990	1	-5.1481
chr5	118376503	118376519	protein_coding	Nos1	exon	ENSMUSG00000029361	NonProperStrand	237	chr11	6428099	6428155	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.0195
chr16	18561671	18561761	protein_coding	Gnb1l	intron	ENSMUSG00000000884	ProperStrand	25	chr5	108334199	108334279	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-6.5433
chr1	24620839	24620879	protein_coding	Gm10925	utr3	ENSMUSG00000090378	ProperStrand	320	chr14	96988079	96988179	snoRNA	ENSMUSG00000064581_SNORA30	.	ENSMUSG00000064581	ProperStrand	146	1	-8.1798
chr2	144087324	144087462	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	chr17	24857728	24857849	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	19	-1.6944
chr18	10052134	10052153	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr4	56910524	56910573	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-1.9615
chr11	51839973	51840000	protein_coding	Cdkl3	intron	ENSMUSG00000020389	ProperStrand	14	chr3	86724697	86724782	protein_coding	Dclk2	utr5	ENSMUSG00000028078	ProperStrand	50	1	-16.6748
chr11	69559503	69559603	protein_coding	Polr2a	exon	ENSMUSG00000005198	ProperStrand	200	chr17	24665468	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-2.7119
chr19	5719336	5719352	protein_coding	Ehbp1l1	exon	ENSMUSG00000024937	ProperStrand	75	chr2	30225857	30225879	protein_coding	Fam73b	exon	ENSMUSG00000026858	ProperStrand	6	1	-17.5256
chr13	97422682	97422737	protein_coding	Hmgcr	exon	ENSMUSG00000021670	ProperStrand	56	chr16	23110534	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.5801
chr6	125399469	125399486	Simple_repeat	(TCTCC)n	Simple_repeat	chr6(TCTCC)n125399468	NonProperStrand	16	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-10.4162
chr9	22616828	22616928	protein_coding	Bbs9	exon	ENSMUSG00000035919	ProperStrand	51	chr16	23110518	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.7428
chr9	107949169	107949219	protein_coding	Ip6k1	utr3	ENSMUSG00000032594	ProperStrand	61	chr2	26494712	26494802	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.0773
chr10	82112482	82112539	protein_coding	Tdg	utr3	ENSMUSG00000034674	ProperStrand	42	chr19	8963026	8963096	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	9	-inf
chr2	90235318	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	28326170	28326234	protein_coding	Pld3	exon	ENSMUSG00000003363	ProperStrand	8	2	-13.7415
chr13	115556139	115556156	LTR	RLTR20B2	ERVK	chr13RLTR20B2115555841	NonProperStrand	1	chr19	8963088	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-inf
chr1	163510065	163510082	SINE	B4A	B4	chr1B4A163510032	NonProperStrand	3	chr1	24621429	24621486	protein_coding	Gm10925	intron	ENSMUSG00000090378	NonProperStrand	70	1	-20.0448
chr8	109074875	109074914	protein_coding	Cdh3	intron	ENSMUSG00000061048	ProperStrand	62	chr9	15118333	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.4065
chr6	28164503	28164593	LTR	LTR16B	ERVL	chr6LTR16B28164500	ProperStrand	1	chr2	22444717	22444797	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-inf
chr2	181316563	181316579	protein_coding	Uckl1	exon	ENSMUSG00000089917	ProperStrand	142	chr19	8799581	8799644	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-5.0784
chr14	67422971	67423071	protein_coding	Dpysl2	utr3	ENSMUSG00000022048	ProperStrand	36	chr3	96303443	96303511	tRNA	tRNA748-LysCTT	.	913943	ProperStrand	15	1	-17.1846
chr16	37882963	37882980	protein_coding	Lrrc58	utr3	ENSMUSG00000034158	NonProperStrand	45	chr7	54103057	54104371	protein_coding	Ldha	exon	ENSMUSG00000063229	ProperStrand	280	1	-10.8054
chr3	85925078	85927087	protein_coding	Sh3d19	exon	ENSMUSG00000028082	ProperStrand	58	chr10	110918549	110918639	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	17	-inf
chr15	72934887	72934905	protein_coding	Eif2c2	utr3	ENSMUSG00000036698	ProperStrand	154	chr2	26493364	26493508	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-3.7462
chr6	113284585	113284601	protein_coding	Camk1	exon	ENSMUSG00000030272	ProperStrand	13	chr6	113647054	113647071	protein_coding	Tatdn2	utr5	ENSMUSG00000056952	ProperStrand	24	1	-18.3408
chr10	117146804	117147055	protein_coding	Mdm2	utr5	ENSMUSG00000020184	NonProperStrand	2	chr6	148870509	148870589	protein_coding	Fam60a	utr3	ENSMUSG00000039985	NonProperStrand	3	2	-inf
chr7	80635500	80635540	protein_coding	Chd2	exon	ENSMUSG00000078671	ProperStrand	69	chr7	116663749	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-4.0559
chr17	35972876	35972976	protein_coding	Tubb5	exon	ENSMUSG00000001525	ProperStrand	624	chr9	20912466	20913267	protein_coding	Tyk2	exon	ENSMUSG00000032175	ProperStrand	29	1	-10.0937
chr10	18393547	18393563	protein_coding	D10Bwg1379e	intron	ENSMUSG00000019852	NonProperStrand	120	chr7	133920511	133920541	protein_coding	Ypel3	utr5	ENSMUSG00000042675	ProperStrand	2	1	-inf
chr4	153394431	153394464	protein_coding	Lrrc47	utr3	ENSMUSG00000029028	ProperStrand	30	chr17	34749889	34749963	protein_coding	Agpat1	utr3	ENSMUSG00000034254	ProperStrand	28	5	-19.5783
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr9	64143757	64143877	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	2	-5.9533
chr3	88667391	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr7	118219574	118219627	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	7	-3.0349
chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr2	26493363	26493485	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	9	-5.4945
chr8	113560885	113564043	protein_coding	Aars	exon	ENSMUSG00000031960	ProperStrand	355	chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	2	-12.5798
chr2	32881629	32881645	protein_coding	Garnl3	exon	ENSMUSG00000038860	NonProperStrand	54	chr2	63936035	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-8.0717
chr2	130505406	130505484	protein_coding	Itpa	intron	ENSMUSG00000074797	ProperStrand	6	chr16	23110973	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.7876
chr10	20080841	20080858	protein_coding	Fam54a	utr3	ENSMUSG00000019992	ProperStrand	232	chr16	23111690	23111787	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-1.3019
chr6	148874557	148874628	protein_coding	Fam60a	exon	ENSMUSG00000039985	ProperStrand	68	chr7	117166761	117166851	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-4.5754
chr4	131908357	131908464	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr4	53873622	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	2	-5.4280
chr2	167836656	167836678	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	chr7	51505228	51505308	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	1	-6.9813
chr10	80069181	80069199	protein_coding	Adat3	exon	ENSMUSG00000035370	NonProperStrand	2	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-9.4105
chr11	59251618	59251670	protein_coding	Snap47	exon	ENSMUSG00000009894	ProperStrand	19	chr12	88062992	88063012	protein_coding	Angel1	exon	ENSMUSG00000021257	ProperStrand	12	1	-19.6418
chr11	6519810	6519906	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	chr4	131865411	131865496	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	12	-11.0121
chr17	85169726	85169773	protein_coding	Lrpprc	exon	ENSMUSG00000024120	ProperStrand	98	chr19	44188367	44188406	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	2	-10.9863
chr1	128336923	128336940	protein_coding	Nckap5	intron	ENSMUSG00000049690	NonProperStrand	22	chr5	108336363	108336409	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-6.8629
chr15	46715523	46715539	LINE	L1_Mur1	L1	chr15L1_Mur146715423	NonProperStrand	1	chr12	70260534	70260584	misc_RNA	AC099934.1	.	ENSMUSG00000092665	ProperStrand	45	1	-inf
chr10	126964004	126971453	protein_coding	Nxph4	exon	ENSMUSG00000040258	ProperStrand	8	chr14	31827478	31827515	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-11.0652
chr14	55130039	55130223	protein_coding	Prmt5	exon	ENSMUSG00000023110	ProperStrand	72	chr4	131908689	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-1.9615
chr4	116875149	116875249	snRNA	ENSMUSG00000070228_U5	.	ENSMUSG00000070228	ProperStrand	131	chr4	131908688	131908890	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-0.8663
chr16	16924220	16924278	protein_coding	Ppm1f	utr3	ENSMUSG00000026181	ProperStrand	37	chr2	23011328	23011344	protein_coding	Mastl	exon	ENSMUSG00000026779	ProperStrand	60	1	-14.2898
chr17	35299542	35299632	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	NonProperStrand	14	chr19	8963087	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-13.1197
chr4	44045387	44045479	protein_coding	Clta	utr3	ENSMUSG00000028478	ProperStrand	59	chr8	32260335	32260385	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-4.6622
chr5	100855902	100855938	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr9	104115222	104116152	protein_coding	Dnajc13	exon	ENSMUSG00000032560	ProperStrand	60	1	-6.6378
chr8	87368011	87368041	protein_coding	Calr	exon	ENSMUSG00000003814	ProperStrand	232	chr4	57706987	57707003	protein_coding	Palm2	intron	ENSMUSG00000090053	NonProperStrand	187	1	-8.3266
chr6	125112672	125112884	protein_coding	Gapdh	exon	ENSMUSG00000057666	ProperStrand	356	chr17	35089182	35089210	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	3	-5.9427
chr5	114571713	114571729	protein_coding	Usp30	exon	ENSMUSG00000029592	NonProperStrand	3	chr5	3693225	3693241	protein_coding	Ankib1	exon	ENSMUSG00000040351	NonProperStrand	98	1	-18.7694
chr10	61329160	61330213	protein_coding	Col13a1	exon	ENSMUSG00000058806	ProperStrand	120	chr2	26493385	26493438	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-2.5011
chr4	118056033	118056054	protein_coding	Szt2	exon	ENSMUSG00000033253	ProperStrand	23	chr13	51743567	51743660	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	2	-13.9923
chr4	115783231	115783250	protein_coding	Rad54l	intron	ENSMUSG00000028702	ProperStrand	19	chr9	64024466	64024524	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	1	-10.6924
chr18	35965812	35965902	protein_coding	Ube2d2	utr3	ENSMUSG00000091896	ProperStrand	20	chr2	26494717	26494797	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.1919
chr6	31472048	31472094	protein_coding	Podxl	utr3	ENSMUSG00000025608	ProperStrand	37	chr14	93575981	93575998	protein_coding	Pcdh9	intron	ENSMUSG00000055421	ProperStrand	59	1	-14.3192
chr17	46658280	46658297	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr2	26768049	26768106	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	1	-4.3962
chr13	21845526	21845616	protein_coding	Hist1h2ak	exon	ENSMUSG00000063021	ProperStrand	30	chr1	145626058	145626138	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-10.2267
chrX	83547356	83547372	protein_coding	Mageb4	intron	ENSMUSG00000035427	NonProperStrand	191	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-2.5922
chr1	36837821	36837859	protein_coding	Zap70	exon	ENSMUSG00000026117	ProperStrand	5	chr9	15119666	15119766	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-7.5411
chr8	12757419	12757437	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr13	46862887	46862944	snoRNA	ENSMUSG00000064558_SNORA55	.	ENSMUSG00000064558	ProperStrand	187	1	-6.3355
chr10	58685067	58685083	pseudogene	Sowahc	.	ENSMUSG00000071286	ProperStrand	3	chr11	62416951	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	2	-inf
chr1	14288085	14288101	protein_coding	Eya1	intron	ENSMUSG00000025932	ProperStrand	4	chr16	23110918	23110940	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.6489
chr5	138610503	138610663	protein_coding	Mcm7	exon	ENSMUSG00000029730	ProperStrand	258	chr3	34549966	34550046	protein_coding	Sox2	exon	ENSMUSG00000074637	ProperStrand	299	1	-7.1845
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr2	152052864	152052906	protein_coding	Csnk2a1	intron	ENSMUSG00000074698	ProperStrand	91	1	-7.7735
chr12	109460710	109460726	protein_coding	Ccdc85c	intron	ENSMUSG00000084883	ProperStrand	157	chr12	17552948	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-3.2781
chr11	51390402	51390587	protein_coding	Col23a1	exon	ENSMUSG00000063564	ProperStrand	16	chr17	24856681	24856753	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-9.0899
chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	chr15	88991407	88991433	protein_coding	Plxnb2	exon	ENSMUSG00000036606	ProperStrand	119	1	-8.3865
chr13	104902156	104902176	protein_coding	Sgtb	intron	ENSMUSG00000042743	ProperStrand	60	chr14	52628207	52628281	protein_coding	Zfp219	exon	ENSMUSG00000049295	ProperStrand	27	1	-14.9329
chr2	104176607	104176687	protein_coding	D430041D05Rik	intron	ENSMUSG00000068373	NonProperStrand	6	chr2	104070669	104070759	protein_coding	D430041D05Rik	intron	ENSMUSG00000068373	ProperStrand	12	1	-20.1124
chr6	144981391	144983093	protein_coding	Bcat1	exon	ENSMUSG00000030268	ProperStrand	49	chr14	64829132	64829149	protein_coding	Msra	intron	ENSMUSG00000054733	NonProperStrand	84	1	-13.0491
chr2	32563420	32563448	protein_coding	Cdk9	utr3	ENSMUSG00000009555	ProperStrand	12	chr3	123210853	123210974	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-12.1748
chr2	118355662	118355723	protein_coding	Bmf	utr3	ENSMUSG00000040093	ProperStrand	53	chr11	77995218	77995239	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	2	-10.4087
chr8	87223594	87223610	protein_coding	Trmt1	exon	ENSMUSG00000001909	NonProperStrand	60	chr16	23111689	23111753	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.9032
chr2	90616272	90616323	protein_coding	Fnbp4	exon	ENSMUSG00000008200	ProperStrand	45	chrX	17740226	17740244	protein_coding	Kdm6a	exon	ENSMUSG00000037369	ProperStrand	19	1	-16.2377
chr12	110918156	110918221	snoRNA	ENSMUSG00000065749_AF357428	.	ENSMUSG00000065749	ProperStrand	218	chr6	124665366	124665466	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	1	-4.4200
chr16	19883898	19884021	protein_coding	A930003A15Rik	exon	ENSMUSG00000075330	ProperStrand	93	chr1	88247814	88247835	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-4.2563
chr3	97008934	97009005	protein_coding	Bcl9	exon	ENSMUSG00000038256	ProperStrand	94	chr11	69483194	69483284	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	7	-13.6614
chr17	71990911	71991001	protein_coding	Wdr43	intron	ENSMUSG00000041057	ProperStrand	70	chr2	144087337	144087417	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-6.2409
chr17	47731845	47734393	protein_coding	Ccnd3	exon	ENSMUSG00000034165	ProperStrand	58	chr4	131908248	131908338	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.4677
chr10	99923613	99923629	protein_coding	Tmtc3	exon	ENSMUSG00000036676	NonProperStrand	9	chr19	7054884	7054901	protein_coding	Fkbp2	utr5	ENSMUSG00000056629	ProperStrand	18	1	-18.6028
chr7	4745140	4745212	protein_coding	Rpl28	exon	ENSMUSG00000030432	ProperStrand	220	chr11	97641499	97641589	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	1	-5.2959
chr17	29484568	29484586	protein_coding	Mtch1	exon	ENSMUSG00000024012	NonProperStrand	2	chr16	23110911	23111001	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-inf
chr14	64111498	64116209	protein_coding	Tdh	utr3	ENSMUSG00000021953	ProperStrand	67	chr16	23110914	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-1.2172
mmu-miR-6239	1	18	miRNA	mmu-miR-6239	.	mmu-miR-6239	ProperStrand	31	chr2	25854207	25854289	protein_coding	Ubac1	utr3	ENSMUSG00000036352	ProperStrand	25	4	-19.4874
chr5	23832423	23832440	protein_coding	Kcnh2	exon	ENSMUSG00000038319	NonProperStrand	1	chr7	116663645	116663764	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-inf
chr2	3375211	3375286	protein_coding	Suv39h2	utr3	ENSMUSG00000026646	ProperStrand	6	chr7	134160331	134160347	protein_coding	2900092E17Rik	exon	ENSMUSG00000030680	ProperStrand	11	1	-18.8087
chr11	62366426	62366507	protein_coding	Ubb	exon	ENSMUSG00000019505	ProperStrand	32	chr11	21040584	21040600	protein_coding	Peli1	exon	ENSMUSG00000020134	ProperStrand	69	1	-14.3005
chr12	104313226	104313243	protein_coding	Unc79	intron	ENSMUSG00000021198	ProperStrand	99	chr2	130074454	130074470	protein_coding	Tmc2	exon	ENSMUSG00000060332	NonProperStrand	1	1	-inf
chr2	70927899	70927915	protein_coding	Dcaf17	exon	ENSMUSG00000041966	NonProperStrand	89	chr15	79912134	79912194	protein_coding	Rpl3	exon	ENSMUSG00000060036	ProperStrand	8342	3	-7.3958
chr19	6336815	6336920	protein_coding	Men1	exon	ENSMUSG00000024947	ProperStrand	24	chr11	6315954	6318124	protein_coding	Ppia	exon	ENSMUSG00000071866	ProperStrand	127	2	-inf
chr1	93717657	93717677	protein_coding	Twist2	intron	ENSMUSG00000007805	ProperStrand	21	chr9	54768317	54768334	protein_coding	Agphd1	exon	ENSMUSG00000035878	NonProperStrand	19	1	-17.6481
chr6	131315408	131317819	protein_coding	Csda	utr3	ENSMUSG00000030189	ProperStrand	86	chr17	35088971	35089021	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	3	-12.1107
chr2	32818804	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	chr11	77995189	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	13	-11.1875
chr9	40611854	40611993	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr9	30235085	30235101	protein_coding	Snx19	exon	ENSMUSG00000031993	ProperStrand	353	1	-4.6600
chr14	60208315	60208368	protein_coding	Cdadc1	intron	ENSMUSG00000021982	ProperStrand	5	chr7	52381973	52382012	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	2	-19.0218
chr19	10975198	10975245	protein_coding	Prpf19	exon	ENSMUSG00000024735	ProperStrand	75	chr1	162965530	162965578	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-7.3981
chr13	114636991	114637048	protein_coding	Arl15	intron	ENSMUSG00000042348	ProperStrand	51	chr15	98350146	98350237	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	4	-15.8175
chr3	95129787	95129871	protein_coding	Setdb1	intron	ENSMUSG00000015697	ProperStrand	23	chr17	35089184	35089210	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-7.3918
chr11	70485549	70487508	protein_coding	Camta2	exon	ENSMUSG00000040712	ProperStrand	16	chr6	120467088	120468467	protein_coding	Cecr5	exon	ENSMUSG00000058979	ProperStrand	97	1	-15.0369
chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	1	-6.3015
chr1	182733380	182733413	protein_coding	H3f3a	intron	ENSMUSG00000060743	ProperStrand	46	chr14	76247808	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-4.6797
chr16	34986602	34986618	protein_coding	Mylk	exon	ENSMUSG00000022836	NonProperStrand	56	chr4	131866157	131866292	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	4	-12.4849
chr17	50415453	50415543	LTR	RLTR14-int	ERV1	chr17RLTR14-int50415417	ProperStrand	1	chr6	24481120	24481210	protein_coding	Asb15	intron	ENSMUSG00000029685	ProperStrand	3	1	-inf
chr4	111928995	111929011	protein_coding	Skint3	intron	ENSMUSG00000070868	NonProperStrand	48	chr16	23110454	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.8496
chr16	57391619	57391746	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr17	35299510	35299644	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	NonProperStrand	14	3	-inf
chr17	36124743	36125068	protein_coding	Gnl1	exon	ENSMUSG00000024429	ProperStrand	70	chr1	162967530	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-3.1934
chr5	34012191	34012291	protein_coding	Tacc3	exon	ENSMUSG00000037313	ProperStrand	26	chr15	34370545	34370599	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-5.1461
chr4	62978525	62978541	protein_coding	Col27a1	exon	ENSMUSG00000045672	ProperStrand	32	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.4550
chr11	120423536	120423723	protein_coding	P4hb	exon	ENSMUSG00000025130	ProperStrand	83	chr9	78327223	78327256	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	3	-13.1891
chr7	52378551	52378583	protein_coding	Rps11	exon	ENSMUSG00000003429	ProperStrand	49	chr2	26494710	26494801	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.4758
chr1	133832108	133832158	protein_coding	Nucks1	utr3	ENSMUSG00000026434	ProperStrand	59	chr1	89673603	89673693	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-3.2939
chr8	11831513	11831915	protein_coding	Arhgef7	exon	ENSMUSG00000031511	ProperStrand	38	chr4	131908236	131908273	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.1259
chr10	11147731	11147749	protein_coding	Epm2a	intron	ENSMUSG00000055493	NonProperStrand	8	chr16	23111371	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-16.1819
chr6	125111994	125115591	protein_coding	Gapdh	utr3	ENSMUSG00000057666	ProperStrand	356	chr4	131908264	131908429	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	8	-2.2012
chr18	35716684	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	chr14	31827477	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	20	-3.0159
chr19	44188436	44188526	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	2	-4.3789
chr1	139976731	139976747	protein_coding	Ptprc	exon	ENSMUSG00000026395	ProperStrand	27	chr7	129067648	129067682	protein_coding	Cog7	intron	ENSMUSG00000034951	ProperStrand	29	1	-16.4574
chr9	120860727	120860774	protein_coding	Ctnnb1	exon	ENSMUSG00000006932	ProperStrand	214	chr19	8963031	8963111	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-1.1842
chr4	10808997	10809013	protein_coding	2610301B20Rik	exon	ENSMUSG00000059482	ProperStrand	3	chr7	117189863	117189897	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-12.5479
chr9	78023110	78023148	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr1	130234697	130234780	protein_coding	Mcm6	exon	ENSMUSG00000026355	ProperStrand	69	3	-13.0114
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr3	96654255	96654271	protein_coding	Pdzk1	exon	ENSMUSG00000038298	ProperStrand	101	1	-7.5535
chr7	135845877	135845904	protein_coding	Mcmbp	exon	ENSMUSG00000048170	ProperStrand	87	chr8	73419671	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.4781
chr4	147257814	147259613	protein_coding	Mfn2	exon	ENSMUSG00000029020	ProperStrand	8	chr19	8963027	8963083	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-6.1145
chr17	57164812	57164985	protein_coding	Khsrp	exon	ENSMUSG00000007670	ProperStrand	353	chr6	83059830	83059848	protein_coding	Mrpl53	utr3	ENSMUSG00000030037	ProperStrand	13	4	-inf
chr12	89699698	89699714	protein_coding	Adck1	utr3	ENSMUSG00000021044	NonProperStrand	42	chr5	111121066	111121182	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-7.1434
chr7	134168975	134169075	protein_coding	Maz	utr5	ENSMUSG00000030678	ProperStrand	42	chr4	3762227	3762247	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	2	-16.0820
chr19	40648822	40652091	protein_coding	Aldh18a1	exon	ENSMUSG00000025007	ProperStrand	19	chr5	137970843	137970878	protein_coding	Gnb2	exon	ENSMUSG00000029713	ProperStrand	23	1	-17.4393
chr8	124927314	124931306	protein_coding	Zc3h18	exon	ENSMUSG00000017478	ProperStrand	55	chr2	27391876	27391966	protein_coding	Wdr5	utr3	ENSMUSG00000026917	ProperStrand	81	1	-12.8859
chr2	23050089	23050270	protein_coding	Yme1l1	exon	ENSMUSG00000026775	ProperStrand	20	chr1	89673606	89673686	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-5.3603
chr11	97392650	97392671	protein_coding	Srcin1	intron	ENSMUSG00000038453	ProperStrand	29	chr18	35716833	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.4490
chr2	102926980	102926997	protein_coding	Apip	intron	ENSMUSG00000010911	NonProperStrand	26	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-9.4232
chr17	46814084	46814100	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr11	62416578	62416599	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-1.5505
chr3	87719406	87719506	protein_coding	Hdgf	utr3	ENSMUSG00000004897	ProperStrand	117	chr3	153573529	153573597	snoRNA	ENSMUSG00000064731_Snord45b	.	ENSMUSG00000064731	ProperStrand	205	1	-9.5091
chr4	45529398	45529416	protein_coding	Shb	intron	ENSMUSG00000044813	ProperStrand	32	chr5	145532312	145532374	protein_coding	Trrap	intron	ENSMUSG00000045482	ProperStrand	399	1	-10.7866
chrX	91435208	91435226	protein_coding	Eif2s3x	utr3	ENSMUSG00000035150	NonProperStrand	83	chr2	144087385	144087463	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	2	-9.6107
chr9	65497227	65498413	protein_coding	Rbpms2	exon	ENSMUSG00000032387	ProperStrand	85	chr8	98270015	98270095	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	6	-19.6522
chr17	32453268	32453285	protein_coding	Akap8	exon	ENSMUSG00000024045	ProperStrand	339	chr5	121655016	121655126	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	3	-3.0741
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr13	51743566	51743658	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-2.6861
chr1	74283334	74283384	protein_coding	Arpc2	utr5	ENSMUSG00000006304	ProperStrand	16	chr8	41570003	41570019	protein_coding	Zdhhc2	utr3	ENSMUSG00000039470	NonProperStrand	85	1	-15.2915
chr3	96527940	96527956	protein_coding	Polr3c	exon	ENSMUSG00000028099	NonProperStrand	75	chr1	162965980	162966024	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-3.1952
chr8	75059668	75059696	protein_coding	Med26	intron	ENSMUSG00000045248	ProperStrand	45	chr13	51743521	51743621	protein_coding	Cks2	intron	ENSMUSG00000062248	ProperStrand	26	1	-15.5721
chr8	122129036	122129052	protein_coding	Taf1c	utr5	ENSMUSG00000031832	ProperStrand	26	chr13	12488807	12488892	protein_coding	Heatr1	exon	ENSMUSG00000050244	ProperStrand	74	3	-20.2636
chr19	29686827	29686856	protein_coding	Ermp1	utr3	ENSMUSG00000046324	ProperStrand	103	chr5	121655017	121655107	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.7697
chr16	4621676	4621695	protein_coding	Pam16	intron	ENSMUSG00000014301	ProperStrand	5	chr11	97642952	97643015	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-7.3581
chr4	120231473	120234101	protein_coding	Ctps	exon	ENSMUSG00000028633	ProperStrand	19	chr10	23505190	23505232	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.1073
chr6	148941089	148941107	protein_coding	Dennd5b	utr3	ENSMUSG00000030313	NonProperStrand	9	chr17	13112490	13112576	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	3	-18.4614
chr5	92485116	92485206	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	chr17	35087894	35087940	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-1.2265
chr5	46116859	46116875	protein_coding	Lcorl	intron	ENSMUSG00000015882	ProperStrand	15	chr15	79913300	79913345	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-6.2900
chr11	60370927	60370943	protein_coding	Alkbh5	utr3	ENSMUSG00000042650	ProperStrand	203	chr1	88252837	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	2	-7.1260
chr13	98245189	98245279	lincRNA	Gm11019	intron	ENSMUSG00000078952	NonProperStrand	10	chr15	98356818	98356900	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	1	-11.4092
chr8	107037108	107037255	protein_coding	Nae1	exon	ENSMUSG00000031878	ProperStrand	13	chr12	21274407	21274423	protein_coding	Asap2	utr3	ENSMUSG00000052632	ProperStrand	45	1	-16.9696
chr11	68804193	68804273	protein_coding	Pfas	exon	ENSMUSG00000020899	ProperStrand	53	chr6	115757990	115758080	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	2	-9.3325
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr6	8185634	8186068	protein_coding	Mios	utr3	ENSMUSG00000042447	NonProperStrand	40	2	-10.8375
chr2	91412616	91412672	protein_coding	Ckap5	exon	ENSMUSG00000040549	ProperStrand	53	chr4	131908688	131908753	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.3969
chrX	138159145	138159161	protein_coding	Irs4	exon	ENSMUSG00000054667	NonProperStrand	98	chr15	79908929	79908960	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-4.5246
chr13	112540780	112541440	protein_coding	Map3k1	exon	ENSMUSG00000021754	ProperStrand	113	chr3	123210913	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.1287
chr9	35020458	35020737	protein_coding	Srpr	exon	ENSMUSG00000032042	ProperStrand	54	chr10	23505190	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.3802
chr11	62416635	62416657	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr11	77351177	77351211	protein_coding	Taok1	utr3	ENSMUSG00000017291	ProperStrand	41	1	-9.7377
chr2	90235290	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	98851092	98851109	lincRNA	Foxl2os	exon	ENSMUSG00000074122	NonProperStrand	6	1	-9.1372
chr10	76521859	76521901	protein_coding	Col18a1	exon	ENSMUSG00000001435	ProperStrand	287	chr8	73419657	73419774	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-0.7535
chr6	149283422	149283494	protein_coding	2810474O19Rik	utr3	ENSMUSG00000032712	ProperStrand	70	chr4	131865930	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.5345
chr2	14532519	14532536	protein_coding	Cacnb2	intron	ENSMUSG00000057914	NonProperStrand	11	chr11	69481333	69481459	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-6.5008
chr8	28284934	28285024	protein_coding	Rab11fip1	exon	ENSMUSG00000031488	ProperStrand	8	chr4	131865891	131865971	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.4974
chr11	120672096	120677725	protein_coding	Fasn	exon	ENSMUSG00000025153	ProperStrand	298	chr4	131908689	131908896	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-0.8013
chr13	9833552	9833661	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr19	38864117	38864140	protein_coding	Noc3l	exon	ENSMUSG00000024999	ProperStrand	11	2	-13.4338
chr18	65846150	65846227	protein_coding	Zfp532	intron	ENSMUSG00000042439	ProperStrand	24	chr11	106362336	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	2	-12.3147
chr8	60437139	60437164	protein_coding	Galntl6	exon	ENSMUSG00000061864	ProperStrand	44	chr16	23110840	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.3090
chr17	94233675	94233692	LINE	L1_Mm	L1	chr17L1_Mm94233177	ProperStrand	1	chr5	121655029	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-inf
chr3	8930034	8930165	protein_coding	Tpd52	utr3	ENSMUSG00000027506	ProperStrand	37	chr11	102294587	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	1	-9.8668
chr3	11580450	11580467	LINE	Lx3A	L1	chr3Lx3A11580299	ProperStrand	53	chr9	20744954	20744975	protein_coding	Dnmt1	exon	ENSMUSG00000004099	ProperStrand	91	1	-12.7269
chr11	119353268	119360854	protein_coding	A730011L01Rik	exon	ENSMUSG00000039850	ProperStrand	25	chr16	23110828	23110871	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.2939
chr12	71146391	71146407	protein_coding	Nin	exon	ENSMUSG00000021068	ProperStrand	95	chr10	126532147	126532163	protein_coding	Os9	utr3	ENSMUSG00000040462	NonProperStrand	28	1	-13.9287
chr17	35293243	35293333	protein_coding	Prrc2a	exon	ENSMUSG00000024393	ProperStrand	315	chr5	130295437	130295517	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	9	-19.0477
chr8	95569475	95569492	protein_coding	Ces1a	intron	ENSMUSG00000071047	ProperStrand	5	chr15	98350146	98350221	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-9.8528
chr6	120362451	120365256	protein_coding	Kdm5a	exon	ENSMUSG00000030180	ProperStrand	57	chr19	8800356	8800416	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-3.6247
chr11	78090593	78090661	protein_coding	2610507B11Rik	exon	ENSMUSG00000010277	ProperStrand	246	chr7	148064654	148064701	protein_coding	Sirt3	intron	ENSMUSG00000025486	ProperStrand	33	4	-19.5701
chr2	121937629	121938835	protein_coding	Spg11	exon	ENSMUSG00000033396	ProperStrand	32	chr7	52382755	52382789	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-8.0087
chr11	97490450	97490550	protein_coding	E130012A19Rik	exon	ENSMUSG00000043439	ProperStrand	83	chr1	162965536	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.6984
chr5	125934760	125934850	protein_coding	Bri3bp	exon	ENSMUSG00000037905	ProperStrand	43	chr16	23110465	23110545	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-7.7945
chr7	80363713	80363793	LINE	L1Md_T	L1	chr7L1Md_T80362880	NonProperStrand	1	chr5	30387212	30387302	protein_coding	Tyms	utr3	ENSMUSG00000025747	ProperStrand	8	1	-inf
chr6	12329478	12329496	protein_coding	Thsd7a	exon	ENSMUSG00000032625	ProperStrand	10	chr1	181320403	181320424	protein_coding	Smyd3	intron	ENSMUSG00000055067	NonProperStrand	190	1	-14.6664
chr11	102343123	102343223	protein_coding	Gpatch8	exon	ENSMUSG00000034621	ProperStrand	49	chr19	8799848	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-5.3405
chr10	81028234	81028324	protein_coding	Aes	exon	ENSMUSG00000054452	ProperStrand	34	chr16	23111711	23111791	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.8630
chr2	93873383	93873415	protein_coding	Hsd17b12	utr3	ENSMUSG00000027195	ProperStrand	28	chr7	148634714	148634814	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-8.9686
chr5	124566336	124566353	protein_coding	Arl6ip4	utr5	ENSMUSG00000029404	ProperStrand	29	chr8	127472549	127472603	protein_coding	Egln1	exon	ENSMUSG00000031987	ProperStrand	13	1	-17.9054
chr13	9833553	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr13	104676409	104679349	protein_coding	Erbb2ip	utr5	ENSMUSG00000021709	ProperStrand	21	2	-11.3651
chr11	3417959	3418059	protein_coding	Smtn	intron	ENSMUSG00000020439	ProperStrand	222	chr9	120038614	120038673	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	23	-19.6295
chr10	60809857	60810226	protein_coding	X99384	exon	ENSMUSG00000020092	ProperStrand	60	chr4	45529398	45529416	protein_coding	Shb	intron	ENSMUSG00000044813	ProperStrand	32	1	-14.5811
chr16	72800514	72800532	protein_coding	Robo1	intron	ENSMUSG00000022883	NonProperStrand	188	chr6	70794803	70794819	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	1	-9.1328
chr8	123956257	123956276	protein_coding	Gm20388	intron	ENSMUSG00000092329	NonProperStrand	203	chr4	116828379	116828453	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	2	-9.6938
chr15	98350146	98350237	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	chr6	38483976	38484003	tRNA	tRNA107-ArgCCT	.	1517248	ProperStrand	63	1	-4.6667
chr2	180731188	180731462	protein_coding	Col20a1	exon	ENSMUSG00000016356	ProperStrand	17	chr15	79913288	79913346	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-6.0370
chr9	30235085	30235102	protein_coding	Snx19	exon	ENSMUSG00000031993	ProperStrand	353	chr11	106362556	106362643	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-3.9608
chr2	145069343	145069360	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	chr11	77996582	77996606	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-1.1562
chr7	13516168	13516208	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr2	91436240	91436336	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	6	-16.2875
chr2	31924012	31924028	protein_coding	Fam78a	utr3	ENSMUSG00000050592	NonProperStrand	340	chr6	127540608	127540626	protein_coding	Efcab4b	intron	ENSMUSG00000061414	ProperStrand	4	1	-15.5367
chr14	31998225	31998502	protein_coding	Nisch	exon	ENSMUSG00000021910	ProperStrand	125	chr2	146125208	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	1	-9.5926
chr11	104196281	104196370	protein_coding	1700081L11Rik	utr3	ENSMUSG00000018412	ProperStrand	73	chr5	121655021	121655101	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.3857
chr9	123760677	123760693	protein_coding	Fyco1	utr5	ENSMUSG00000025241	ProperStrand	31	chr12	60774058	60774110	snoRNA	ENSMUSG00000077603_SNORA3	.	ENSMUSG00000077603	ProperStrand	185	1	-12.3885
chr6	136771413	136772852	protein_coding	Wbp11	exon	ENSMUSG00000030216	ProperStrand	87	chr4	3762227	3762293	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	1	-8.7442
chr18	35073759	35091242	protein_coding	Etf1	exon	ENSMUSG00000024360	ProperStrand	74	chr17	13112492	13112572	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-4.1804
chr2	130268364	130268412	protein_coding	Vps16	exon	ENSMUSG00000027411	ProperStrand	25	chr16	23111696	23111786	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.4223
chr3	146166303	146166352	protein_coding	Gng5	utr3	ENSMUSG00000068523	ProperStrand	13	chr18	33954917	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	4	-19.5371
chr5	74489237	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr7	52378417	52378481	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	1	-1.3638
chr3	156224612	156224628	lincRNA	4930570G19Rik	exon	ENSMUSG00000085084	ProperStrand	326	chr9	64023228	64023303	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	1	-5.1081
chr2	90235299	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	101515391	101515410	Simple_repeat	(TA)n	Simple_repeat	chr7(TA)n101515316	NonProperStrand	1	1	-inf
chr11	72998458	72998538	protein_coding	Ctns	exon	ENSMUSG00000005949	ProperStrand	28	chr2	144087324	144087414	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	23	-19.7116
chr11	63885336	63887052	protein_coding	Cox10	exon	ENSMUSG00000042148	NonProperStrand	187	chr2	141757462	141757480	protein_coding	Macrod2	intron	ENSMUSG00000068205	ProperStrand	18	1	-13.4774
chr5	107175273	107175363	LINE	L1ME1	L1	chr5L1ME1107175125	NonProperStrand	1	chr5	107175574	107175664	LTR	LTR40a	ERVL	chr5LTR40a107175442	NonProperStrand	1	1	-inf
chr7	54441671	54441761	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	chr1	85210170	85210250	protein_coding	C130026I21Rik	intron	ENSMUSG00000052477	ProperStrand	6	1	-16.3202
chr6	70805441	70805521	snoRNA	ENSMUSG00000065750_SNORA5	.	ENSMUSG00000065750	ProperStrand	165	chr18	35714198	35714288	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-1.7202
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr2	157119950	157120991	protein_coding	Rpn2	exon	ENSMUSG00000027642	ProperStrand	363	1	-5.1630
chr4	131908709	131908809	lincRNA	Gm17300	intron	ENSMUSG00000091021	ProperStrand	109	chr9	59523499	59525885	protein_coding	Pkm2	exon	ENSMUSG00000032294	NonProperStrand	18	1	-14.5489
chr13	55765159	55765176	protein_coding	Ddx46	exon	ENSMUSG00000021500	ProperStrand	87	chr16	23110563	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.8521
chr8	87196084	87196141	protein_coding	Nacc1	utr3	ENSMUSG00000001910	ProperStrand	130	chr11	60361129	60361219	protein_coding	Alkbh5	intron	ENSMUSG00000042650	ProperStrand	203	1	-9.3180
chr7	3218934	3218956	miRNA	Mir291a	.	ENSMUSG00000078008	ProperStrand	1	chr2	26494724	26494842	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-inf
chr2	179322379	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	2	-8.1934
chr3	100369431	100369447	protein_coding	Man1a2	utr3	ENSMUSG00000008763	NonProperStrand	28	chr19	8800411	8800460	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-4.9806
chr11	102466072	102466093	protein_coding	Fzd2	exon	ENSMUSG00000050288	ProperStrand	15	chr8	124001847	124001863	protein_coding	Gm20388	intron	ENSMUSG00000092329	NonProperStrand	203	1	-13.6896
chr10	49845171	49845188	LINE	L1VL4	L1	chr10L1VL449844774	NonProperStrand	17	chr6	70794802	70794820	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	1	-13.9888
chr5	135852296	135852323	protein_coding	Nsun5	utr3	ENSMUSG00000000916	ProperStrand	4	chr10	23505152	23505232	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-16.0846
chr11	87240282	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	chr19	8798507	8798553	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	5	-13.2941
chr10	80640616	80640811	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr7	106628067	106631342	snoRNA	ENSMUSG00000065822_Snord15a	.	ENSMUSG00000065822	ProperStrand	128	2	-7.6674
chr8	4325711	4325728	protein_coding	Ccl25	intron	ENSMUSG00000023235	ProperStrand	10	chr5	108336363	108336411	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-8.4814
chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	chr2	91436231	91436304	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-3.3240
chr4	40128491	40128529	protein_coding	Aco1	exon	ENSMUSG00000028405	ProperStrand	25	chr7	148634773	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-9.3145
chr2	163909011	163909060	protein_coding	Stk4	intron	ENSMUSG00000018209	ProperStrand	20	chr16	23110891	23110981	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-3.0614
chr7	29546870	29546900	protein_coding	Nfkbib	exon	ENSMUSG00000030595	ProperStrand	8	chr1	162966203	162966269	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	2	-18.5889
chr3	96654255	96654271	protein_coding	Pdzk1	exon	ENSMUSG00000038298	ProperStrand	101	chr10	90432659	90432679	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	1	-9.5737
chr2	25077781	25077805	protein_coding	Tubb4b	utr3	ENSMUSG00000036752	ProperStrand	58	chr2	180424160	180424260	protein_coding	Dido1	exon	ENSMUSG00000038914	ProperStrand	81	1	-12.7810
chr10	43594505	43596305	protein_coding	Qrsl1	exon	ENSMUSG00000019863	ProperStrand	2	chr4	131908689	131908746	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-8.0336
chr6	122685521	122685621	protein_coding	Slc2a3	exon	ENSMUSG00000003153	ProperStrand	682	chr16	43886794	43886854	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	1	-3.3713
chr14	22659787	22659877	protein_coding	Vdac2	intron	ENSMUSG00000021771	ProperStrand	18	chr11	6520369	6520449	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	1	-10.1515
chr2	26493428	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr15	98350165	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	11	-5.3611
chr19	56929823	56929840	protein_coding	Tdrd1	exon	ENSMUSG00000025081	NonProperStrand	1	chr7	117190015	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-inf
chr11	69730636	69732700	protein_coding	Eif5a	utr3	ENSMUSG00000078812	ProperStrand	164	chr15	98350172	98350283	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	4	-10.0316
chr5	148391880	148391896	protein_coding	Flt1	exon	ENSMUSG00000029648	ProperStrand	10	chr10	23505152	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-7.3782
chr4	147432308	147432324	protein_coding	Mthfr	utr3	ENSMUSG00000029009	ProperStrand	19	chr15	34370644	34370663	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-5.7679
mmu-miR-1949	2	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr1	181682454	181682511	protein_coding	Ahctf1	exon	ENSMUSG00000026491	ProperStrand	39	1	-9.0140
chr11	80965641	80965658	protein_coding	Accn1	exon	ENSMUSG00000020704	NonProperStrand	228	chr17	35089182	35089231	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-2.9762
chr18	33362825	33362864	protein_coding	Stard4	utr3	ENSMUSG00000024378	ProperStrand	21	chr19	8963027	8963104	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.1775
chr11	98113471	98113488	protein_coding	Cdk12	intron	ENSMUSG00000003119	ProperStrand	50	chr1	162966189	162966256	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-7.9405
chr16	18623106	18623209	protein_coding	Sept5	utr3	ENSMUSG00000072214	NonProperStrand	2	chr7	52382752	52382828	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	2	-inf
chr18	33134448	33134468	protein_coding	Camk4	intron	ENSMUSG00000038128	NonProperStrand	42	chr17	13115655	13115700	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	1	-8.2475
chr17	66881463	66881553	LTR	LTR78	ERV1	chr17LTR7866881454	ProperStrand	1	chr17	66881685	66881775	SINE	B4A	B4	chr17B4A66881643	ProperStrand	1	1	-inf
chr19	45832404	45841986	protein_coding	Mgea5	exon	ENSMUSG00000025220	ProperStrand	53	chr2	158182156	158182280	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	2	-8.6194
chr2	75499827	75499989	protein_coding	Hnrnpa3	exon	ENSMUSG00000059005	ProperStrand	289	chr6	117121583	117121600	protein_coding	Cxcl12	exon	ENSMUSG00000061353	NonProperStrand	6	1	-14.9155
chr5	130338544	130338631	protein_coding	Sumf2	utr3	ENSMUSG00000025538	ProperStrand	20	chr9	64024932	64024998	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	1	-11.3670
chr18	75160712	75160776	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	chr7	118219669	118219739	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-0.8324
chr8	114354864	114364296	protein_coding	Cfdp1	exon	ENSMUSG00000031954	ProperStrand	32	chr17	24857717	24857807	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	3	-8.5836
chr14	21843496	21848470	protein_coding	Vcl	utr5	ENSMUSG00000021823	ProperStrand	48	chr18	35716701	35716781	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.5460
chr2	130101986	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	chr1	187066848	187066917	snoRNA	ENSMUSG00000077571_Snora36b	.	ENSMUSG00000077571	ProperStrand	244	1	-2.7407
chr11	88816617	88816687	protein_coding	Scpep1	utr5	ENSMUSG00000000278	ProperStrand	54	chr4	116828432	116828449	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-8.5935
chr10	121189243	121189306	protein_coding	BC048403	utr3	ENSMUSG00000053684	ProperStrand	8	chr6	111353971	111353991	protein_coding	Grm7	intron	ENSMUSG00000056755	ProperStrand	13	1	-19.2024
chr2	32077028	32077044	protein_coding	Prrc2b	exon	ENSMUSG00000039262	NonProperStrand	8	chr2	26494748	26494826	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-7.0621
chr2	180419953	180444387	protein_coding	Dido1	intron	ENSMUSG00000038914	ProperStrand	81	chr16	23110828	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	9	-6.3307
chr7	118214190	118214207	protein_coding	Eif4g2	utr3	ENSMUSG00000005610	NonProperStrand	30	chr4	131908835	131908884	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.2894
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr2	130103751	130103811	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-4.1614
chr2	164521970	164521987	SINE	B4A	B4	chr2B4A164521909	ProperStrand	41	chr13	21988824	21988844	miRNA	Mir1983	.	ENSMUSG00000088148	ProperStrand	23	1	-16.0298
mmu-miR-6240	4	25	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr2	181316563	181316579	protein_coding	Uckl1	exon	ENSMUSG00000089917	ProperStrand	142	1	-4.2397
chr3	88290772	88290817	protein_coding	Lmna	exon	ENSMUSG00000028063	ProperStrand	25	chr3	85943002	85943089	protein_coding	Rps3a	exon	ENSMUSG00000028081	ProperStrand	177	5	-inf
chr11	6416277	6416293	protein_coding	Myo1g	exon	ENSMUSG00000020437	ProperStrand	18	chr4	131908298	131908355	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.4481
chr9	78023109	78023155	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr19	40625435	40625453	protein_coding	Aldh18a1	utr3	ENSMUSG00000025007	ProperStrand	19	1	-8.1798
chr8	114437838	114437901	protein_coding	Tmem231	exon	ENSMUSG00000031951	ProperStrand	17	chr7	51505225	51505308	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	6	-19.2194
chr1	173341933	173341949	protein_coding	Usf1	utr5	ENSMUSG00000026641	NonProperStrand	144	chr4	131866218	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-2.1270
chr9	99483993	99484009	protein_coding	Dbr1	exon	ENSMUSG00000032469	ProperStrand	162	chr7	29136525	29136553	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-0.9040
chr4	108278918	108278934	protein_coding	Orc1	exon	ENSMUSG00000028587	ProperStrand	161	chr11	69481433	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-1.5562
chr1	183282762	183282779	protein_coding	Cnih3	utr5	ENSMUSG00000026514	NonProperStrand	32	chr18	73693171	73693187	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-6.7675
chr8	91554973	91556748	protein_coding	Sall1	exon	ENSMUSG00000031665	ProperStrand	96	chr1	162965536	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-4.3221
chr14	29932324	29932341	protein_coding	Cacna2d3	intron	ENSMUSG00000021991	NonProperStrand	26	chr9	21086172	21086263	protein_coding	Kri1	exon	ENSMUSG00000035047	ProperStrand	10	1	-18.3738
chr14	121337804	121337894	protein_coding	Ipo5	exon	ENSMUSG00000030662	ProperStrand	135	chr19	8800375	8800455	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-2.1124
chr18	35102297	35102367	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	chr19	8963027	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	25	-4.5042
chr2	170173292	170173349	protein_coding	Bcas1	utr3	ENSMUSG00000013523	ProperStrand	15	chr1	88247768	88247868	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	11	-inf
chr7	105649054	105649070	protein_coding	Lrrc32	utr3	ENSMUSG00000090958	NonProperStrand	3	chr4	131908809	131908873	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-12.0505
chr11	5773414	5773514	protein_coding	Pold2	exon	ENSMUSG00000020471	ProperStrand	58	chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-6.5213
chr14	52628087	52628171	protein_coding	Zfp219	exon	ENSMUSG00000049295	ProperStrand	27	chr12	110918201	110918221	snoRNA	ENSMUSG00000065749_AF357428	.	ENSMUSG00000065749	ProperStrand	218	5	-inf
chr11	115445109	115445140	protein_coding	Nup85	utr3	ENSMUSG00000020739	ProperStrand	33	chr11	77996560	77996611	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-7.2809
chr10	60915201	60915291	protein_coding	Eif4ebp2	exon	ENSMUSG00000020091	ProperStrand	39	chr11	51551334	51551414	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	1	-8.5630
chr1	137925367	137925385	protein_coding	Tmem9	intron	ENSMUSG00000026411	ProperStrand	14	chr2	4544718	4544735	protein_coding	Prpf18	utr3	ENSMUSG00000039449	NonProperStrand	66	1	-16.0997
chr14	58199845	58199913	protein_coding	Xpo4	utr3	ENSMUSG00000021952	ProperStrand	39	chr8	11209637	11210763	protein_coding	Col4a1	exon	ENSMUSG00000031502	NonProperStrand	10	2	-18.8367
chr15	99080399	99080912	protein_coding	Mcrs1	utr5	ENSMUSG00000037570	ProperStrand	46	chr4	131908417	131908445	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-5.1457
chr18	61297248	61297272	protein_coding	Hmgxb3	exon	ENSMUSG00000024622	ProperStrand	25	chr1	63225577	63225711	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-8.4230
chr6	24568334	24569429	protein_coding	Wasl	exon	ENSMUSG00000029684	ProperStrand	25	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	4	-12.7972
chr1	27426765	27426845	LINE	L1Md_F3	L1	chr1L1Md_F327426595	ProperStrand	1	chr6	8959218	8959308	protein_coding	Nxph1	intron	ENSMUSG00000046178	ProperStrand	16	1	-inf
chr9	110085540	110137457	protein_coding	Smarcc1	exon	ENSMUSG00000032481	ProperStrand	108	chr10	23505152	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-4.3178
chr1	20552542	20552558	protein_coding	Pkhd1	exon	ENSMUSG00000043760	NonProperStrand	49	chr10	23505151	23505209	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.5211
chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	chr7	52262386	52262462	protein_coding	Scaf1	exon	ENSMUSG00000038406	ProperStrand	81	1	-9.1553
chr9	104978029	104978047	protein_coding	Mrpl3	utr3	ENSMUSG00000032563	ProperStrand	13	chr4	131908757	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.8088
chr18	10052132	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-2.6527
chr1	59539683	59539700	protein_coding	Fzd7	utr5	ENSMUSG00000041075	ProperStrand	373	chr6	71832629	71832683	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-2.2427
chr6	51482566	51482655	protein_coding	Snx10	intron	ENSMUSG00000038301	ProperStrand	9	chr7	52378398	52378457	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	1	-12.3879
chr14	15572354	15572371	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr5	121655020	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-3.5764
chr15	36538165	36538255	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr2	80155842	80155859	protein_coding	Dnajc10	utr5	ENSMUSG00000027006	NonProperStrand	2	1	-15.3718
chr18	77641436	77641454	protein_coding	Loxhd1	intron	ENSMUSG00000032818	NonProperStrand	5	chr10	23505193	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-5.7809
chr1	178754159	178754175	protein_coding	Sdccag8	intron	ENSMUSG00000026504	ProperStrand	54	chr2	145076805	145209255	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-7.9340
chr11	121189614	121189704	protein_coding	Wdr45l	utr3	ENSMUSG00000025173	ProperStrand	8	chr7	116664819	116664899	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-6.4335
chr2	179992344	179992506	protein_coding	Rps21	exon	ENSMUSG00000039001	ProperStrand	46	chr9	64022899	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	2	-13.6158
chr5	100392885	100393081	protein_coding	Hnrnpd	exon	ENSMUSG00000000568	ProperStrand	33	chr4	131908268	131908348	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.3621
chr14	68347420	68347705	protein_coding	Kctd9	utr5	ENSMUSG00000034327	ProperStrand	38	chr16	23111374	23111454	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-3.5439
chr15	62078508	62078563	lincRNA	Pvt1	intron	ENSMUSG00000072566	ProperStrand	51	chr9	15118323	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	3	-9.2832
chr6	92324246	92324308	protein_coding	Prickle2	utr3	ENSMUSG00000030020	ProperStrand	13	chr1	162968244	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-9.9137
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr8	41682651	41682670	protein_coding	Mtmr7	exon	ENSMUSG00000039431	ProperStrand	40	1	-7.7339
chr13	36209855	36209871	protein_coding	Fars2	utr5	ENSMUSG00000021420	ProperStrand	19	chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	1	-11.1690
chr2	164645207	164645297	protein_coding	Zswim3	intron	ENSMUSG00000045822	ProperStrand	9	chr16	23110913	23110993	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.9939
chr5	121655016	121655116	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	NonProperStrand	38	chr5	111121066	111121130	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	NonProperStrand	8	3	-19.4574
chr9	75051527	75051599	protein_coding	Myo5a	exon	ENSMUSG00000034593	ProperStrand	89	chr2	158182153	158182243	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	10	-inf
chr5	53034051	53034141	protein_coding	Sepsecs	utr3	ENSMUSG00000029173	ProperStrand	7	chr18	35716784	35716864	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-10.3984
chr11	87998206	88000565	protein_coding	Cuedc1	exon	ENSMUSG00000018378	NonProperStrand	20	chr17	13972317	13972340	protein_coding	Mllt4	exon	ENSMUSG00000068036	ProperStrand	156	1	-13.6251
chr1	34246974	34247054	protein_coding	Dst	utr5	ENSMUSG00000026131	ProperStrand	461	chr4	41170489	41174263	protein_coding	Ubap2	exon	ENSMUSG00000028433	ProperStrand	292	1	-6.0888
chr5	136606094	136606194	protein_coding	Lrwd1	exon	ENSMUSG00000029703	ProperStrand	27	chr18	35716829	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.5820
chr18	48625574	48625592	LINE	Lx9	L1	chr18Lx948625524	ProperStrand	1	chr18	33954882	33954909	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-inf
chr18	82662186	82662202	protein_coding	Mbp	intron	ENSMUSG00000041607	NonProperStrand	185	chr7	52382804	52382832	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-4.5567
chr18	35098280	35113900	protein_coding	Hspa9	exon	ENSMUSG00000024359	ProperStrand	166	chr4	131908728	131908890	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-1.0486
chr3	68298683	68298765	protein_coding	Schip1	exon	ENSMUSG00000027777	ProperStrand	70	chr1	193364788	193364853	protein_coding	Dtl	exon	ENSMUSG00000037474	ProperStrand	27	10	-20.3097
chr18	42447778	42447801	protein_coding	Rbm27	exon	ENSMUSG00000024491	ProperStrand	38	chr4	131865919	131865986	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-4.4532
chr1	133252341	133252401	protein_coding	Srgap2	intron	ENSMUSG00000026425	ProperStrand	299	chr15	79913288	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-1.0041
chr11	88706400	88706461	protein_coding	Akap1	exon	ENSMUSG00000018428	ProperStrand	45	chr11	116533862	116533893	snoRNA	ENSMUSG00000065640_Snord1c	.	ENSMUSG00000065640	ProperStrand	373	1	-10.2321
chr3	35713028	35713076	protein_coding	Atp11b	exon	ENSMUSG00000037400	ProperStrand	39	chr19	8963027	8963127	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.0232
chr6	56051505	56051521	protein_coding	Pde1c	utr3	ENSMUSG00000004347	ProperStrand	31	chr1	162967490	162967551	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.7242
chr1	79974025	79974044	LINE	Lx8	L1	chr1Lx879973642	NonProperStrand	1	chr15	68012619	68012635	protein_coding	Zfat	exon	ENSMUSG00000022335	NonProperStrand	25	1	-inf
chr18	60937530	60938088	protein_coding	Rps14	exon	ENSMUSG00000024608	ProperStrand	154	chr18	35716763	35716787	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-0.8257
chr18	46664337	46664404	protein_coding	Fem1c	utr3	ENSMUSG00000033319	ProperStrand	11	chr8	32260373	32260420	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	2	-12.9293
chr4	151730301	151730737	protein_coding	Chd5	exon	ENSMUSG00000005045	NonProperStrand	147	chr19	45853524	45853557	protein_coding	Mgea5	exon	ENSMUSG00000025220	ProperStrand	53	1	-11.7648
chr6	13534147	13534164	protein_coding	Tmem168	intron	ENSMUSG00000029569	ProperStrand	17	chr3	132554382	132554398	protein_coding	Npnt	exon	ENSMUSG00000040998	ProperStrand	14	1	-22.5166
chr9	120039526	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	chr8	32260333	32260432	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	35	-4.4365
chr2	24915691	24915707	protein_coding	Nelf	exon	ENSMUSG00000006476	ProperStrand	40	chr1	194571819	194571880	snRNA	ENSMUSG00000064881_U5	.	ENSMUSG00000064881	ProperStrand	187	1	-11.8515
chr16	22895434	22895499	protein_coding	Ahsg	intron	ENSMUSG00000022868	ProperStrand	1	chr11	98878342	98878432	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-inf
chr6	6906062	6906078	protein_coding	Acn9	exon	ENSMUSG00000042505	ProperStrand	1	chr4	131865855	131865892	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr12	29316621	29319080	protein_coding	Rps7	exon	ENSMUSG00000061477	ProperStrand	129	chr11	97642990	97643070	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.2788
chr5	58340513	58340532	protein_coding	Pcdh7	intron	ENSMUSG00000029108	ProperStrand	8	chrX	12748628	12748645	protein_coding	Usp9x	utr3	ENSMUSG00000031010	NonProperStrand	8	3	-18.6983
chr1	134294487	134294506	LTR	ORR1A3	MaLR	chr1ORR1A3134294467	ProperStrand	1	chr9	120038026	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-inf
chr5	122134437	122135191	protein_coding	Brap	exon	ENSMUSG00000029458	ProperStrand	36	chr11	77995188	77995242	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-7.1982
chr11	53589898	53589937	protein_coding	Irf1	exon	ENSMUSG00000018899	ProperStrand	17	chr11	68886943	68887037	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	2	-10.7622
chr13	4325654	4325734	LINE	L1Md_F2	L1	chr13L1Md_F24322521	NonProperStrand	1	chr4	72018350	72018440	LINE	L1Md_T	L1	chr4L1Md_T72015602	NonProperStrand	1	1	-inf
chr16	5014455	5014510	protein_coding	Glyr1	utr3	ENSMUSG00000022536	ProperStrand	60	chr4	131908810	131908852	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-2.3640
chr2	166890554	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	chr2	144091716	144091816	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	ProperStrand	549	1	-3.2912
chr10	34018013	34018040	protein_coding	Tspyl4	exon	ENSMUSG00000039485	ProperStrand	5	chr8	73419713	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-19.1326
chr4	55024038	55024129	protein_coding	Zfp462	exon	ENSMUSG00000060206	ProperStrand	37	chr2	91436317	91436335	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-8.4661
chr14	30851615	30851631	protein_coding	Chdh	utr3	ENSMUSG00000015970	ProperStrand	50	chr2	130101259	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-6.9532
chr2	98174031	98174048	LTR	IAPLTR3-int	ERVK	chr2IAPLTR3-int98170118	ProperStrand	37	chr2	3245427	3245511	protein_coding	Nmt2	utr3	ENSMUSG00000026643	ProperStrand	21	1	-16.3542
chr8	129468886	129468976	protein_coding	Tomm20	intron	ENSMUSG00000058779	ProperStrand	55	chr7	117166733	117166813	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-4.9842
chr3	134894403	134895862	protein_coding	Cenpe	exon	ENSMUSG00000045328	NonProperStrand	1	chr11	6428098	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	NonProperStrand	91	1	-inf
chr16	30514154	30514171	protein_coding	Tmem44	utr3	ENSMUSG00000022537	ProperStrand	217	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-6.0436
chr3	153575088	153575168	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	chr11	97642952	97643077	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	11	-4.7173
chr11	85153278	85159148	protein_coding	Ppm1d	exon	ENSMUSG00000020525	ProperStrand	3	chr9	15118323	15118365	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-16.2372
chr16	11144103	11144204	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr15	26473161	26473179	protein_coding	Fbxl7	exon	ENSMUSG00000043556	NonProperStrand	3	1	-16.8984
chr9	99286597	99286653	protein_coding	Mras	utr3	ENSMUSG00000032470	ProperStrand	10	chr5	141000554	141000570	protein_coding	Chst12	exon	ENSMUSG00000036599	NonProperStrand	42	2	-20.4051
chr19	7289785	7289895	protein_coding	Cox8a	utr3	ENSMUSG00000035885	ProperStrand	32	chr16	23111373	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-8.3955
chr1	37639996	37640076	LTR	MLT1A0	MaLR	chr1MLT1A037639864	NonProperStrand	1	chr1	37640117	37640207	LTR	RMER12	ERVK	chr1RMER1237640079	NonProperStrand	1	1	-inf
chr2	90235295	90235347	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	60719914	60719930	protein_coding	Uaca	exon	ENSMUSG00000034485	ProperStrand	109	1	-3.3473
chr12	21306074	21307362	protein_coding	Cpsf3	exon	ENSMUSG00000054309	ProperStrand	24	chr2	32818817	32818897	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-7.2911
chr19	29678580	29678596	protein_coding	C030046E11Rik	exon	ENSMUSG00000038658	ProperStrand	104	chr11	97643009	97643061	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.5879
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr5	113515815	113515831	protein_coding	2900026A02Rik	utr3	ENSMUSG00000051339	NonProperStrand	29	1	-10.0587
chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	chr18	63109676	63109692	protein_coding	Apcdd1	exon	ENSMUSG00000071847	NonProperStrand	254	1	-7.8783
chr11	116016096	116016113	protein_coding	Fbf1	exon	ENSMUSG00000020776	NonProperStrand	36	chr7	29136525	29136600	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.2650
chr13	49801207	49802100	protein_coding	Iars	exon	ENSMUSG00000037851	ProperStrand	95	chr19	8799855	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-4.0696
chr17	56597756	56615804	protein_coding	Ptprs	utr5	ENSMUSG00000013236	ProperStrand	152	chr5	131173516	131173533	protein_coding	Caln1	intron	ENSMUSG00000060371	NonProperStrand	15	1	-14.2697
chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr16	43886793	43886929	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	4	-0.8928
chr10	42941622	42941638	protein_coding	Pdss2	exon	ENSMUSG00000038240	NonProperStrand	12	chr12	85350481	85350499	protein_coding	Acot1	utr5	ENSMUSG00000072949	ProperStrand	72	1	-16.2026
chr19	53082307	53082324	protein_coding	Xpnpep1	intron	ENSMUSG00000025027	NonProperStrand	58	chr11	6428060	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-5.5824
chr5	77391482	77393503	protein_coding	Paics	exon	ENSMUSG00000029247	ProperStrand	78	chr3	123210857	123210878	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	5	-8.7385
chr3	101390236	101390822	protein_coding	Atp1a1	exon	ENSMUSG00000033161	ProperStrand	316	chr7	150717345	150717425	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-2.4301
chr2	90235293	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	69825557	69825574	protein_coding	Acadvl	intron	ENSMUSG00000018574	ProperStrand	19	3	-15.4613
chr17	45733492	45733550	protein_coding	Slc29a1	intron	ENSMUSG00000023942	ProperStrand	95	chr2	26493395	26493485	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-2.9071
chr9	59160038	59160128	protein_coding	Adpgk	intron	ENSMUSG00000025236	ProperStrand	19	chr11	97642981	97643061	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.5938
chr9	44143614	44143700	protein_coding	H2afx	utr3	ENSMUSG00000049932	ProperStrand	137	chr4	131865966	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.4188
chr5	21602104	21602126	protein_coding	Reln	intron	ENSMUSG00000042453	NonProperStrand	7	chr16	23110828	23110890	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.4785
chr11	9031673	9031719	protein_coding	Upp1	exon	ENSMUSG00000020407	ProperStrand	73	chr11	63885336	63887052	protein_coding	Cox10	exon	ENSMUSG00000042148	NonProperStrand	187	1	-10.6386
chr1	129271728	129271816	snoRNA	ENSMUSG00000065687_snoU6-53	.	ENSMUSG00000065687	ProperStrand	78	chr17	35087921	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-4.6932
chr8	109172999	109173064	protein_coding	Cdh1	exon	ENSMUSG00000000303	ProperStrand	283	chr9	35584331	35584692	protein_coding	Gm17727	exon	ENSMUSG00000090738	NonProperStrand	7	2	-19.9058
chr7	19843327	19843417	protein_coding-noncoding	Vasp	utr3	ENSMUSG00000030403	ProperStrand	1	chr7	19843713	19843803	protein_coding	Vasp	intron	ENSMUSG00000030403	ProperStrand	28	1	-inf
chr14	72301755	72301771	SINE	B4	B4	chr14B472301692	NonProperStrand	99	chr6	148881527	148881543	protein_coding	Fam60a	exon	ENSMUSG00000039985	ProperStrand	68	1	-12.0556
chr5	74489202	74489326	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr13	75905623	75905650	protein_coding	Ell2	intron	ENSMUSG00000001542	ProperStrand	110	3	-10.6450
chr8	59991434	59991450	protein_coding	Hmgb2	exon	ENSMUSG00000054717	NonProperStrand	96	chr11	97642979	97643008	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.7088
chr15	99602718	99602736	protein_coding	Lass5	exon	ENSMUSG00000023021	ProperStrand	27	chr8	34944807	34944897	protein_coding	Rbpms	exon	ENSMUSG00000031586	ProperStrand	58	2	-inf
chr10	121221598	121221623	protein_coding	Srgap1	utr3	ENSMUSG00000020121	ProperStrand	33	chr11	11867679	11870432	protein_coding	Grb10	exon	ENSMUSG00000020176	NonProperStrand	159	1	-12.5643
chr1	136517514	136517546	protein_coding	Kdm5b	utr5	ENSMUSG00000042207	ProperStrand	223	chr9	15119659	15119759	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-1.4880
chr11	97888591	97888608	protein_coding	Rpl19	intron	ENSMUSG00000017404	NonProperStrand	9	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-14.6575
chr4	129198692	129199634	protein_coding	Hdac1	exon	ENSMUSG00000028800	ProperStrand	49	chr19	8963088	8963168	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-4.6043
chr8	86780199	86780222	protein_coding	Mri1	exon	ENSMUSG00000004996	ProperStrand	9	chr11	6428060	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-6.9084
chr4	99659444	99659483	protein_coding	Pgm2	utr3	ENSMUSG00000025791	ProperStrand	43	chr2	26493366	26493465	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-4.3715
chr10	26451475	26451555	LTR	IAPEz-int	ERVK	chr10IAPEz-int26451011	NonProperStrand	1	chr14	80261274	80261364	lincRNA	Gm6999	intron	ENSMUSG00000075495	ProperStrand	265	1	-inf
chr11	97549689	97549706	protein_coding	Cisd3	exon	ENSMUSG00000078695	ProperStrand	4	chr4	131908809	131908897	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-6.2660
chr16	19883898	19884021	protein_coding	A930003A15Rik	exon	ENSMUSG00000075330	ProperStrand	93	chr4	116828379	116828428	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-7.5077
chr3	134151041	134151057	lincRNA	Gm16742	intron	ENSMUSG00000084777	NonProperStrand	42	chr11	106362640	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-8.1180
chr1	89095706	89095724	protein_coding	Chrnd	utr3	ENSMUSG00000026251	NonProperStrand	8	chr18	33954877	33954948	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-12.2094
chr14	32042378	32042394	protein_coding	Sema3g	utr3	ENSMUSG00000021904	NonProperStrand	47	chr18	35716831	35716858	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.5824
chr11	102294589	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr14	120902873	120902934	protein_coding	Rap2a	exon	ENSMUSG00000051615	ProperStrand	8	1	-13.0308
chr10	31274315	31274335	protein_coding	Rnf217	intron	ENSMUSG00000063760	ProperStrand	33	chr1	162967525	162967566	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.6031
chr7	4745113	4745213	protein_coding	Rpl28	exon	ENSMUSG00000030432	ProperStrand	220	chr7	148140934	148140972	protein_coding	Ifitm2	exon	ENSMUSG00000060591	ProperStrand	25	1	-12.4802
chr2	157147481	157147500	protein_coding	Rpn2	exon	ENSMUSG00000027642	ProperStrand	363	chr4	130224865	130224965	protein_coding	Pum1	exon	ENSMUSG00000028580	ProperStrand	131	3	-17.8279
chr11	69214344	69214504	protein_coding	Kdm6b	exon	ENSMUSG00000018476	NonProperStrand	5	chrX	148033877	148033912	protein_coding	Phf8	exon	ENSMUSG00000041229	ProperStrand	17	1	-19.6626
chr3	148500602	148500637	protein_coding	Lphn2	exon	ENSMUSG00000028184	ProperStrand	20	chr16	23110966	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-3.0614
chr17	35282091	35282153	protein_coding	Bag6	exon	ENSMUSG00000024392	ProperStrand	181	chr3	123210854	123210883	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-2.1419
chr2	129874275	129874365	protein_coding	Tgm3	utr3	ENSMUSG00000027401	ProperStrand	4	chr7	117189957	117190037	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-8.8371
chr2	172780153	172780233	LTR	MTC	MaLR	chr2MTC172780096	ProperStrand	1	chr10	53774475	53774565	protein_coding	Man1a	intron	ENSMUSG00000003746	NonProperStrand	8	1	-inf
chr7	151765212	151765228	antisense	Gm10574	.	ENSMUSG00000073778	ProperStrand	357	chr1	162965531	162965596	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-1.2944
chr7	134341340	134341357	protein_coding	Tbc1d10b	utr3	ENSMUSG00000042492	ProperStrand	187	chr6	71832629	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-3.4494
chrX	7327654	7327671	protein_coding	Ccdc120	intron	ENSMUSG00000031150	NonProperStrand	10	chr1	162965981	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-7.1350
chr3	94977703	94977720	protein_coding	Sema6c	utr3	ENSMUSG00000038777	ProperStrand	30	chr13	59803286	59803302	protein_coding	Fam75d3	exon	ENSMUSG00000050876	ProperStrand	46	1	-15.2642
mmu-miR-6240	1	26	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	5	-7.4694
chr17	13112450	13112528	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	NonProperStrand	11	chr3	123210854	123210925	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	NonProperStrand	45	2	-21.5749
chr10	23386146	23386165	LTR	RLTR44E	ERVK	chr10RLTR44E23385784	ProperStrand	2	chr8	73419657	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-10.3981
chr11	57735914	57735930	SINE	ID_B1	B4	chr11ID_B157735837	NonProperStrand	2	mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	1	-13.3333
chr8	87426786	87426804	protein_coding	Klf1	exon	ENSMUSG00000054191	NonProperStrand	70	chr15	79908939	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-5.1724
chr1	71074474	71074564	protein_coding	Bard1	utr3	ENSMUSG00000026196	ProperStrand	44	chr16	23111376	23111456	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.7117
chr14	55058807	55059217	protein_coding	Mmp14	exon	ENSMUSG00000000957	ProperStrand	61	chr7	117189923	117190035	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	17	-20.5132
chr1	55064422	55064470	protein_coding	Sf3b1	exon	ENSMUSG00000025982	ProperStrand	158	chr4	41673405	41673421	protein_coding	Il11ra1	intron	ENSMUSG00000073889	ProperStrand	128	1	-9.8496
chr8	74013333	74013364	protein_coding	Gtpbp3	exon	ENSMUSG00000007610	ProperStrand	21	chr2	130101245	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	2	-13.8714
chr15	76368396	76368436	protein_coding	Fbxl6	exon	ENSMUSG00000022559	ProperStrand	5	chr11	69481338	69481425	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-13.4175
chr19	34455352	34455369	LTR	MTE2b	MaLR	chr19MTE2b34455309	NonProperStrand	10	chr2	120339453	120339470	protein_coding	Zfp106	intron	ENSMUSG00000027288	NonProperStrand	9	1	-19.9862
chr17	46911880	46911916	protein_coding	Rpl7l1	utr3	ENSMUSG00000063888	ProperStrand	37	chr8	32260334	32260433	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-5.5700
chr4	129687505	129687521	protein_coding	Bai2	exon	ENSMUSG00000028782	ProperStrand	119	chr10	127511325	127513161	protein_coding	Ptges3	utr3	ENSMUSG00000071072	ProperStrand	89	1	-11.1460
chr1	38161609	38161665	protein_coding	Rev1	intron	ENSMUSG00000026082	ProperStrand	48	chr1	138178661	138178677	protein_coding	Camsap2	exon	ENSMUSG00000041570	NonProperStrand	116	1	-12.4388
chr13	25084929	25085004	protein_coding	Mrs2	utr3	ENSMUSG00000021339	ProperStrand	4	chr2	26494708	26494736	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-14.1680
chr15	77597977	77597993	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr2	119596938	119596965	protein_coding	Rpap1	exon	ENSMUSG00000034032	ProperStrand	96	1	-7.8686
chr2	26493391	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr14	100342836	100342853	protein_coding	Klf12	intron	ENSMUSG00000072294	ProperStrand	14	1	-9.1290
chr8	112387973	112387989	antisense	Gm17344	.	ENSMUSG00000078143	NonProperStrand	100	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	2	-9.1253
chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	chr3	94564160	94564184	protein_coding	Cgn	utr3	ENSMUSG00000068876	ProperStrand	14	1	-12.1494
chr2	90235316	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	117227045	117227061	protein_coding	Nup107	exon	ENSMUSG00000052798	NonProperStrand	66	1	-4.2811
chr3	94167315	94167331	protein_coding	C2cd4d	utr5	ENSMUSG00000091648	ProperStrand	30	chr11	6520321	6520443	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	1	-9.1107
chr17	32333762	32333810	protein_coding	Brd4	utr3	ENSMUSG00000024002	ProperStrand	121	chr5	130295478	130295550	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	3	-9.5293
chr9	59518376	59518469	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr4	149611348	149611387	protein_coding	Eno1	utr5	ENSMUSG00000063524	ProperStrand	432	1	-3.3784
chr9	58308688	58308762	lincRNA	4930461G14Rik	intron	ENSMUSG00000086516	ProperStrand	9	chr8	124982774	124982824	protein_coding	Snai3	intron	ENSMUSG00000006587	ProperStrand	9	4	-20.3845
chr4	87677801	87677819	protein_coding	Mllt3	intron	ENSMUSG00000028496	NonProperStrand	10	chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	1	-12.8501
chr1	120552527	120552587	protein_coding	Tfcp2l1	intron	ENSMUSG00000026380	ProperStrand	158	chr5	74489627	74489679	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-2.0753
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	NonProperStrand	8	chr11	69481335	69481425	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	NonProperStrand	24	1	-18.7360
chr17	4082479	4082579	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr1	162966026	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-0.9320
chr13	49008404	49010281	protein_coding	Fam120a	exon	ENSMUSG00000038014	ProperStrand	76	chr6	119875020	119875043	protein_coding	Wnk1	utr3	ENSMUSG00000045962	ProperStrand	221	1	-10.2236
chr15	89201058	89201213	protein_coding	Ncaph2	exon	ENSMUSG00000008690	ProperStrand	65	chr1	72757863	72758251	protein_coding	Rpl37a	utr5	ENSMUSG00000046330	ProperStrand	94	3	-19.0807
chr17	46702353	46702407	protein_coding	Ptk7	exon	ENSMUSG00000023972	ProperStrand	101	chr4	147315085	147315118	protein_coding	2510039O18Rik	utr5	ENSMUSG00000044496	ProperStrand	28	1	-13.8087
chr7	117166741	117166845	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	chr17	24856620	24856743	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	9	-4.4517
chr10	5862164	5862184	snRNA	ENSMUSG00000065371_U1	.	ENSMUSG00000065371	ProperStrand	2	chr16	23110894	23110960	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr19	5802051	5802096	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr5	147647153	147647253	protein_coding	Rpl21	exon	ENSMUSG00000041453	ProperStrand	112	6	-inf
chr8	98923273	98923363	LINE	L1Md_F3	L1	chr8L1Md_F398923118	ProperStrand	1	chr7	54441678	54441758	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-inf
chr12	112779264	112779282	protein_coding	Eif5	intron	ENSMUSG00000021282	ProperStrand	125	chr3	68889082	68889202	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-1.9946
chr1	120575747	120575814	protein_coding	Tfcp2l1	utr3	ENSMUSG00000026380	ProperStrand	158	chr15	79913288	79913321	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-1.9143
chr6	146901973	146901989	protein_coding	1700034J05Rik	exon	ENSMUSG00000040163	ProperStrand	2	chr16	23110843	23110933	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-inf
chr7	52165178	52171290	protein_coding	Ap2a1	exon	ENSMUSG00000060279	ProperStrand	193	chr5	130300486	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-0.8000
chr3	41295471	41295561	lincRNA	C430002E04Rik	intron	ENSMUSG00000091878	ProperStrand	5	chr19	8963089	8963169	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-7.1260
chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	chr2	84903126	84903226	protein_coding	Tnks1bp1	exon	ENSMUSG00000033955	ProperStrand	23	1	-11.6975
chr1	181027187	181027205	protein_coding	Smyd3	intron	ENSMUSG00000055067	ProperStrand	231	chr11	62416597	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-2.6651
chr7	151765212	151765228	antisense	Gm10574	.	ENSMUSG00000073778	ProperStrand	357	chr2	158182229	158182297	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-1.8086
chr17	4082185	4082202	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr19	3904233	3904250	protein_coding	Tcirg1	exon	ENSMUSG00000001750	ProperStrand	77	1	-9.4644
chr7	134671387	134671457	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	chr16	23109054	23109093	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-2.1705
chr1	153602594	153602610	protein_coding	Edem3	utr5	ENSMUSG00000043019	ProperStrand	84	chr11	62416597	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-7.5085
chr7	106628074	106628133	snoRNA	ENSMUSG00000064966_Snord15b	.	ENSMUSG00000064966	ProperStrand	74	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-4.7944
chrX	147476948	147476965	SINE	RSINE1	B4	chrXRSINE1147476844	NonProperStrand	20	chr7	34994813	34994849	protein_coding-noncoding	Gpi1	utr3	ENSMUSG00000036427	ProperStrand	19	1	-17.9676
chr4	136151394	136151411	protein_coding	Kdm1a	intron	ENSMUSG00000036940	ProperStrand	83	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.2907
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr5	115939528	115939613	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-3.0589
chr11	102848783	102848801	lincRNA	Gm17536	intron	ENSMUSG00000091056	NonProperStrand	3	chr7	52715002	52715038	protein_coding	Ftl1	utr5	ENSMUSG00000050708	ProperStrand	807	1	-14.4786
chr11	75473735	75473835	protein_coding	Myo1c	exon	ENSMUSG00000017774	ProperStrand	38	chr16	23110986	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.7634
chr17	13115665	13115755	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	chr11	77996576	77996626	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-1.0325
chr10	107714437	107714484	protein_coding	Ppp1r12a	utr3	ENSMUSG00000019907	ProperStrand	65	chr12	88778723	88778767	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	3	-14.4986
chr5	104255037	104257440	protein_coding	Aff1	exon	ENSMUSG00000029313	ProperStrand	82	chr11	99885311	99885327	protein_coding	Krt33b	exon	ENSMUSG00000057723	NonProperStrand	352	1	-9.1420
chr4	140719536	140719561	protein_coding	Fbxo42	intron	ENSMUSG00000028920	ProperStrand	91	chr15	98350186	98350286	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-3.9686
chr6	99009819	99009838	protein_coding	Foxp1	intron	ENSMUSG00000030067	ProperStrand	16	chr13	49779679	49779742	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-9.6836
chr8	32239595	32239611	protein_coding	Rnf122	utr3	ENSMUSG00000039328	NonProperStrand	42	chr9	15119736	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.2646
chr3	96654255	96654271	protein_coding	Pdzk1	exon	ENSMUSG00000038298	ProperStrand	101	chr3	123210892	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.2797
chr2	130102004	130102050	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	chr2	130103432	130103503	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-0.8972
chr5	145336226	145336316	LTR	ORR1A4	MaLR	chr5ORR1A4145336245	ProperStrand	1	chr5	145336420	145336500	Unknown	YREP_Mm	Unknown	chr5YREP_Mm145336414	ProperStrand	1	1	-inf
chr15	74394262	74394279	miRNA	AC117657.1	.	ENSMUSG00000093340	ProperStrand	10	chr11	62416606	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-8.7767
chr11	68886931	68887021	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	chr1	162967734	162967780	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	3	-4.3902
chrX	90827379	90827395	protein_coding	Pola1	exon	ENSMUSG00000006678	ProperStrand	83	chr7	51505821	51505866	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	1	-7.9663
chr2	72134872	72134889	protein_coding	B230120H23Rik	intron	ENSMUSG00000004085	NonProperStrand	26	chr17	35089181	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-7.1445
chr2	161362602	161362619	protein_coding	Ptprt	intron	ENSMUSG00000053141	NonProperStrand	46	chr7	116663662	116663691	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.9772
chr12	63772896	63772986	LTR	MT2B	ERVL	chr12MT2B63772591	ProperStrand	1	chr12	63773105	63773185	LTR	MTD	MaLR	chr12MTD63773115	ProperStrand	1	1	-inf
chr4	131908701	131908801	lincRNA	Gm17300	intron	ENSMUSG00000091021	ProperStrand	109	chr1	55064485	55064537	protein_coding	Sf3b1	exon	ENSMUSG00000025982	NonProperStrand	4	1	-17.5737
chr8	13781689	13781721	protein_coding	Cdc16	utr3	ENSMUSG00000038416	ProperStrand	28	chr7	46794779	46794796	protein_coding	Zfp619	utr3	ENSMUSG00000068959	ProperStrand	9	1	-18.5572
chr19	44079677	44079693	protein_coding	Cyp2c44	utr3	ENSMUSG00000025197	NonProperStrand	21	chr4	86500820	86500847	protein_coding	Rps6	exon	ENSMUSG00000028495	ProperStrand	263	1	-12.4785
chr13	75907062	75907104	protein_coding	Ell2	exon	ENSMUSG00000001542	ProperStrand	110	chr9	120038564	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.0051
chr11	69484134	69484175	protein_coding	Eif4a1	exon	ENSMUSG00000059796	ProperStrand	108	chr5	121655016	121655117	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.6871
chr13	9833571	9833660	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr19	5801825	5801908	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	2	-0.9481
chr5	77738902	77738918	protein_coding	Noa1	exon	ENSMUSG00000036285	ProperStrand	147	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-3.5024
chr16	4084280	4084380	protein_coding	Crebbp	exon	ENSMUSG00000022521	ProperStrand	56	chr19	8963026	8963042	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.3909
chr11	94924454	94924503	protein_coding	Itga3	exon	ENSMUSG00000001507	ProperStrand	21	chr18	35714144	35714235	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-5.4554
chr9	15069885	15069901	protein_coding	Med17	exon	ENSMUSG00000031935	ProperStrand	135	chr14	76247725	76247817	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-2.6937
chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	chr3	95980334	95980360	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-3.0091
chr6	93127321	93127338	lincRNA	9530026P05Rik	intron	ENSMUSG00000087573	ProperStrand	51	chr17	28038677	28038716	protein_coding	Taf11	exon	ENSMUSG00000024218	ProperStrand	3	1	-inf
chr13	17810667	17810695	protein_coding	Cdk13	exon	ENSMUSG00000041297	ProperStrand	29	chr15	98350184	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-6.1858
chr19	55401096	55401113	protein_coding	Vti1a	intron	ENSMUSG00000024983	NonProperStrand	62	chr7	56863924	56863955	protein_coding	Nav2	utr3	ENSMUSG00000052512	ProperStrand	106	1	-12.1045
chr18	10052129	10052153	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr13	17031204	17031224	protein_coding	5033411D12Rik	intron	ENSMUSG00000055137	NonProperStrand	23	1	-10.7388
chr8	46035999	46036034	protein_coding	Fat1	exon	ENSMUSG00000070047	ProperStrand	306	chr6	64088282	64088301	protein_coding	Grid2	intron	ENSMUSG00000071424	NonProperStrand	76	1	-9.5736
chr4	108733395	108733546	protein_coding	Nrd1	exon	ENSMUSG00000053510	ProperStrand	76	chr16	23111390	23111480	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.9513
chr3	107427610	107428649	protein_coding	Fam40a	exon	ENSMUSG00000014601	ProperStrand	18	chr16	23110911	23110991	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7867
chr2	120542514	120542530	protein_coding	Stard9	intron	ENSMUSG00000033705	ProperStrand	42	chr14	76247772	76247836	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-4.8555
chr7	28053919	28059066	protein_coding	Numbl	exon	ENSMUSG00000063160	ProperStrand	35	chr1	88247813	88247835	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-6.1551
chr19	9043651	9051878	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	chr16	23111710	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	30	-19.5720
chr11	102059022	102060123	protein_coding	Hdac5	exon	ENSMUSG00000008855	ProperStrand	45	chr5	130300460	130300540	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.0143
chr1	39902173	39902514	LINE	L2b	L2	chr1L2b39902159	NonProperStrand	28	chr14	47808943	47808960	protein_coding	Gch1	utr5	ENSMUSG00000037580	NonProperStrand	31	1	-16.1545
chr11	98878371	98878467	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	chr13	49779768	49779804	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-0.8341
chrX	67458741	67458757	LINE	Lx8	L1	chrXLx867458264	NonProperStrand	35	chr16	23110454	23110509	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.4208
chr10	79605272	79605320	protein_coding	Atp5d	exon	ENSMUSG00000003072	ProperStrand	44	chr3	32820061	32820078	protein_coding	Usp13	intron	ENSMUSG00000056900	ProperStrand	15	1	-16.8652
chr2	103608563	103608604	protein_coding	Caprin1	exon	ENSMUSG00000027184	ProperStrand	145	chr2	131882473	131882503	protein_coding	Slc23a2	exon	ENSMUSG00000027340	ProperStrand	44	1	-12.1681
chr7	120697733	120697823	antisense	1700006P19Rik	.	ENSMUSG00000084984	ProperStrand	1	chr7	103597772	103597852	protein_coding	Odz4	intron	ENSMUSG00000048078	NonProperStrand	15	1	-inf
chr19	3717095	3717111	protein_coding	1810055G02Rik	exon	ENSMUSG00000035372	NonProperStrand	15	chr7	29136525	29136609	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.9384
chr9	15130930	15131005	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	chr15	34370546	34370636	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	8	-8.2578
chr11	69414236	69414314	protein_coding	Atp1b2	utr3	ENSMUSG00000041329	ProperStrand	28	chr16	23110829	23110875	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.2442
chr4	147391159	147391259	protein_coding	Clcn6	intron	ENSMUSG00000029016	ProperStrand	120	chr16	23111374	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-1.0432
chr2	27936467	27938439	protein_coding	Fcnb	exon	ENSMUSG00000026835	ProperStrand	11	chr6	33010051	33010067	protein_coding	Chchd3	exon	ENSMUSG00000053768	ProperStrand	6	1	-19.1881
chr2	90235298	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr18	74379602	74379620	protein_coding	Cxxc1	exon	ENSMUSG00000024560	NonProperStrand	19	1	-6.7268
chr2	90235286	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	4099334	4099381	protein_coding	Leng8	utr3	ENSMUSG00000035545	ProperStrand	49	1	-4.8520
chr13	49255160	49255250	LTR	MLT1K	MaLR	chr13MLT1K49255104	ProperStrand	1	chr13	49139904	49139994	protein_coding	Wnk2	intron	ENSMUSG00000037989	NonProperStrand	67	1	-inf
chr16	72800514	72800532	protein_coding	Robo1	intron	ENSMUSG00000022883	NonProperStrand	188	chr11	106362567	106362635	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	2	-8.4721
chr1	36838670	36838686	protein_coding	Zap70	intron	ENSMUSG00000026117	ProperStrand	5	chr5	121655016	121655100	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-8.7807
chr17	31743215	31743232	protein_coding	Pknox1	utr3	ENSMUSG00000006705	NonProperStrand	5	chr11	69481333	69481436	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	3	-18.6946
chr16	70537136	70537153	protein_coding	Gbe1	intron	ENSMUSG00000022707	NonProperStrand	17	chr7	30074412	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-12.9912
chr15	7092785	7092889	protein_coding	Lifr	intron	ENSMUSG00000054263	ProperStrand	64	chr9	15118325	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.3484
chr8	35232302	35232320	protein_coding	Tmem66	intron	ENSMUSG00000031532	NonProperStrand	1	chr8	32260404	32260424	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-inf
chr9	57217029	57217046	LINE	Lx4A	L1	chr9Lx4A57216705	ProperStrand	16	chr11	97642952	97643055	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-11.8605
chr15	81195769	81195786	protein_coding	St13	utr3	ENSMUSG00000022403	ProperStrand	59	chr9	15118244	15118321	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.4975
chr16	90386836	90386853	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	chr15	79913288	79913341	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-4.5694
chrX	13957983	13958073	LINE	L1Md_F2	L1	chrXL1Md_F213956773	NonProperStrand	1	chrX	15589100	15589180	LINE	L1_Mus3	L1	chrXL1_Mus315587253	NonProperStrand	1	1	-inf
chr2	90235305	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chrX	158855487	158855503	protein_coding	Reps2	exon	ENSMUSG00000040855	NonProperStrand	5	1	-9.5409
chr2	73200537	73200553	protein_coding	Gpr155	exon	ENSMUSG00000041762	ProperStrand	33	chr11	106362589	106362671	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	2	-13.6983
chr7	125895622	125895665	protein_coding	9030624J02Rik	intron	ENSMUSG00000030982	ProperStrand	18	chr4	131865863	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	8	-20.0704
mmu-miR-291a-3p	0	21	miRNA	mmu-miR-291a-3p	.	mmu-miR-291a-3p	ProperStrand	19	chr8	73419619	73419719	protein_coding	Rpl18a	intron	ENSMUSG00000045128	ProperStrand	394	1	-11.8750
chr13	65398666	65398682	protein_coding	Zfp369	exon	ENSMUSG00000021514	NonProperStrand	5	chr17	24857716	24857775	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-11.8657
chr3	37603824	37603914	LINE	Lx6	L1	chr3Lx637603568	ProperStrand	1	chr3	65061772	65061852	protein_coding	Kcnab1	intron	ENSMUSG00000027827	ProperStrand	5	1	-inf
chr16	57391626	57391723	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr11	68717870	68717927	protein_coding	Rpl26	exon	ENSMUSG00000060938	NonProperStrand	2	1	-18.0561
chr15	99569133	99569223	protein_coding	Lass5	exon	ENSMUSG00000023021	ProperStrand	27	chr11	69483163	69483243	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-9.6149
chr11	119136228	119136244	protein_coding	Gaa	exon	ENSMUSG00000025579	NonProperStrand	201	chr9	103114185	103114236	protein_coding	Trf	exon	ENSMUSG00000032554	ProperStrand	1	1	-inf
chr17	45722675	45723076	protein_coding	Slc29a1	exon	ENSMUSG00000023942	ProperStrand	95	chr16	23111741	23111821	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.2241
chr6	148874594	148874663	protein_coding	Fam60a	exon	ENSMUSG00000039985	ProperStrand	68	chr7	116663696	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.2997
chr8	72337846	72337947	protein_coding	Gmip	exon	ENSMUSG00000036246	ProperStrand	102	chr11	77995189	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-5.1452
chr15	84030306	84030800	protein_coding	Samm50	exon	ENSMUSG00000022437	ProperStrand	51	chr4	131865385	131865475	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-4.3099
chr5	143647006	143647022	protein_coding-noncoding	Fbxl18	utr3	ENSMUSG00000066640	ProperStrand	1	chr11	6523906	6523922	protein_coding	Tbrg4	exon	ENSMUSG00000000384	NonProperStrand	56	1	-inf
chrX	70931805	70931848	protein_coding	Bcap31	utr3	ENSMUSG00000002015	ProperStrand	21	chr3	137849424	137849440	protein_coding	4930579F01Rik	utr5	ENSMUSG00000012042	NonProperStrand	156	1	-13.5252
chr2	154503138	154515364	protein_coding	Chmp4b	exon	ENSMUSG00000038467	ProperStrand	21	chr16	23110827	23110875	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	11	-19.5512
chr17	34089394	34089467	protein_coding	Rps18	exon	ENSMUSG00000008668	ProperStrand	111	chr10	61329160	61330213	protein_coding	Col13a1	exon	ENSMUSG00000058806	ProperStrand	120	1	-10.6857
chr19	39042249	39042275	protein_coding	Hells	exon	ENSMUSG00000025001	ProperStrand	23	chr14	76247711	76247787	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-6.0408
chr2	143780710	143780744	protein_coding	Rrbp1	exon	ENSMUSG00000027422	ProperStrand	76	chr15	34370545	34370604	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	3	-7.9072
chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	chr2	167777380	167777399	protein_coding	Ptpn1	intron	ENSMUSG00000027540	ProperStrand	10	1	-12.8735
chr3	35754053	35754120	protein_coding	Atp11b	utr3	ENSMUSG00000037400	ProperStrand	39	chr1	33828651	33828669	protein_coding	Zfp451	intron	ENSMUSG00000042197	NonProperStrand	393	1	-10.4167
chr1	138425829	138425886	protein_coding	Kif14	utr3	ENSMUSG00000041498	ProperStrand	13	chr12	16946848	16946921	snoRNA	ENSMUSG00000064620_SNORA32	.	ENSMUSG00000064620	ProperStrand	165	1	-14.4049
chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-2.3023
chr1	194571837	194571880	snRNA	ENSMUSG00000064881_U5	.	ENSMUSG00000064881	ProperStrand	187	chr18	35714165	35714265	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-1.5325
chr16	13872577	13876085	protein_coding	Pdxdc1	exon	ENSMUSG00000022680	ProperStrand	26	chr9	15119733	15119762	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.1620
chr7	118069894	118069910	protein_coding	Mrvi1	exon	ENSMUSG00000005611	NonProperStrand	11	chr10	23505559	23505625	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-11.0033
chr17	4082516	4082591	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr3	96527940	96527956	protein_coding	Polr3c	exon	ENSMUSG00000028099	NonProperStrand	75	1	-9.5172
chr8	125626932	125626980	snoRNA	ENSMUSG00000064450_Snord68	.	ENSMUSG00000064450	ProperStrand	181	chr7	116663634	116663758	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-1.7630
chr6	122556321	122556343	protein_coding	Gdf3	utr3	ENSMUSG00000030117	ProperStrand	20	chr6	115757998	115758133	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-7.6615
chr18	68390501	68390517	protein_coding	D18Ertd653e	intron	ENSMUSG00000024544	ProperStrand	16	chr9	120038552	120038587	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.5625
chr11	20012670	20012691	protein_coding	Actr2	intron	ENSMUSG00000020152	NonProperStrand	17	chr18	42805538	42805554	protein_coding	Ppp2r2b	exon	ENSMUSG00000024500	NonProperStrand	95	1	-14.9508
chr3	97817679	97851651	protein_coding	Notch2	exon	ENSMUSG00000027878	ProperStrand	86	chr14	22019327	22019344	protein_coding	Adk	intron	ENSMUSG00000039197	ProperStrand	32	1	-13.8619
chr9	108600734	108600762	protein_coding	Prkar2a	intron	ENSMUSG00000032601	ProperStrand	43	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-10.0399
chr13	32141690	32141711	protein_coding	Gmds	intron	ENSMUSG00000038372	NonProperStrand	8	chr3	123210883	123210962	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.8655
chr6	57712505	57712521	protein_coding	Vopp1	exon	ENSMUSG00000037788	NonProperStrand	21	chr11	106362556	106362605	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-9.5207
mmu-miR-1291	0	16	miRNA	mmu-miR-1291	.	mmu-miR-1291	ProperStrand	103	chrX	34622905	34622991	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-2.2326
chr3	90207011	90207076	protein_coding	Ints3	exon	ENSMUSG00000027933	ProperStrand	87	chr7	29136532	29136622	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-3.2379
chr3	97817680	97851652	protein_coding	Notch2	exon	ENSMUSG00000027878	ProperStrand	86	chr9	102490600	102490656	protein_coding	Cep63	intron	ENSMUSG00000032534	ProperStrand	23	1	-14.5323
chr15	41620675	41620692	protein_coding	Oxr1	exon	ENSMUSG00000022307	ProperStrand	21	chr15	79913296	79913343	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-5.6139
chr2	158185529	158185653	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr19	8798743	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	4	-0.9171
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	84886581	84886804	protein_coding	Ssrp1	exon	ENSMUSG00000027067	ProperStrand	118	1	-3.2036
chr9	20451113	20451181	protein_coding	Ubl5	utr3	ENSMUSG00000084786	ProperStrand	11	chr4	56910496	56910547	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	4	-24.7374
chr15	12739134	12739224	protein_coding	6030458C11Rik	utr3	ENSMUSG00000022195	ProperStrand	12	chr10	23505200	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-6.7989
chr2	146125209	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	chr4	131865413	131865517	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	6	-12.3908
chr9	15514257	15514276	protein_coding	Slc36a4	exon	ENSMUSG00000043885	ProperStrand	94	chr4	131908380	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.8340
chr16	23111296	23111587	protein_coding	Eif4a2	exon	ENSMUSG00000022884	ProperStrand	356	chr7	117166719	117166809	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-1.6642
chr11	53082017	53082044	protein_coding	Hspa4	exon	ENSMUSG00000020361	ProperStrand	69	chr9	105946597	105950049	protein_coding	Col6a4	exon	ENSMUSG00000032572	ProperStrand	22	1	-15.0646
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr2	61549756	61549772	protein_coding	Psmd14	utr5	ENSMUSG00000090649	ProperStrand	7	1	-13.0163
chrX	20255890	20256586	protein_coding	Uba1	exon	ENSMUSG00000001924	ProperStrand	156	chr9	120037912	120037992	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-2.9327
chr2	136890072	136890139	protein_coding	2210009G21Rik	intron	ENSMUSG00000027281	ProperStrand	2	chr18	33954823	33954913	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-10.8123
chr4	132055014	132055199	protein_coding	Sesn2	exon	ENSMUSG00000028893	ProperStrand	75	chr4	131866155	131866235	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-3.2557
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr11	78313939	78313956	protein_coding	Vtn	exon	ENSMUSG00000017344	ProperStrand	188	1	-9.0815
chr15	36526355	36538600	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr10	110918549	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	16	-13.1282
chr2	104653240	104653330	protein_coding	Qser1	intron	ENSMUSG00000074994	ProperStrand	22	chr4	131908814	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.8292
chr13	81032877	81032922	protein_coding	Arrdc3	utr3	ENSMUSG00000074794	ProperStrand	6	chr2	32818904	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	3	-19.5637
chr14	58430462	58430488	protein_coding	F630043A04Rik	exon	ENSMUSG00000021965	ProperStrand	24	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-10.8312
chr5	13364492	13364512	protein_coding	Sema3a	intron	ENSMUSG00000028883	NonProperStrand	10	chr16	23110455	23110526	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.8693
chr7	149170854	149171339	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	chr2	91436261	91436337	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-5.4677
chr11	48617731	48619059	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	chr15	31388749	31388839	protein_coding	March6	utr3	ENSMUSG00000039100	ProperStrand	94	1	-8.8972
chrX	148325381	148325591	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	chr1	88247743	88247799	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	26	-inf
chr3	89891395	89904773	protein_coding	Tpm3	utr3	ENSMUSG00000027940	ProperStrand	55	chr16	23110828	23111010	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	10	-11.2883
chr4	33589517	33589535	protein_coding	Rngtt	utr3	ENSMUSG00000028274	ProperStrand	26	chr7	149170854	149171340	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	1	-12.9402
chr7	127794385	127794720	protein_coding	Uqcrc2	exon	ENSMUSG00000030884	ProperStrand	26	chr10	23505149	23505239	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-4.5156
chr6	136765638	136765683	protein_coding	Wbp11	exon	ENSMUSG00000030216	ProperStrand	87	chr10	90075788	90075806	protein_coding	Anks1b	intron	ENSMUSG00000058589	NonProperStrand	230	1	-9.8725
chr16	23111485	23111507	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr15	98350146	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-1.1062
chr11	97642992	97643082	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	chr4	116828379	116828453	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	7	-1.5472
chr2	130480056	130480960	protein_coding	Ddrgk1	exon	ENSMUSG00000068290	ProperStrand	43	chr12	112779147	112779231	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	9	-inf
chr9	15112186	15112969	protein_coding	Taf1d	utr5	ENSMUSG00000031939	ProperStrand	363	chr11	6520321	6520411	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	1	-4.2044
chr7	125262656	125262682	protein_coding	Arl6ip1	utr3	ENSMUSG00000030654	ProperStrand	57	chr5	74489607	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	5	-16.0708
chr5	116042080	116042125	protein_coding	Gcn1l1	exon	ENSMUSG00000041638	ProperStrand	408	chr2	158184118	158184208	snoRNA	ENSMUSG00000064995_SNORA71	.	ENSMUSG00000064995	ProperStrand	430	1	-5.5720
chrX	132336688	132336768	protein_coding	Gprasp1	exon	ENSMUSG00000043384	ProperStrand	57	chr2	26493380	26493470	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-3.8382
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr11	6428077	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-1.8460
chr18	78019781	78019980	protein_coding	Atp5a1	exon	ENSMUSG00000025428	ProperStrand	254	chr2	32818850	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-2.7732
chr7	125278845	125278925	protein_coding	Smg1	utr3	ENSMUSG00000030655	ProperStrand	70	chr11	69483136	69483206	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.1911
chr17	3654462	3654478	protein_coding	Nox3	intron	ENSMUSG00000023802	ProperStrand	3	chr11	6428076	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-inf
chr9	21602970	21602986	protein_coding	Kank2	utr5	ENSMUSG00000032194	ProperStrand	196	chr4	129305587	129305616	protein_coding	Txlna	utr3	ENSMUSG00000053841	ProperStrand	37	1	-11.9149
chr18	24646947	24647015	protein_coding	Rprd1a	intron	ENSMUSG00000040446	ProperStrand	21	chr6	71832602	71832689	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-7.7044
chr18	49532462	49532542	LINE	L1Md_F2	L1	chr18L1Md_F249530705	NonProperStrand	1	chr1	129639796	129639886	protein_coding	Acmsd	intron	ENSMUSG00000026348	NonProperStrand	2	1	-inf
chr18	67562255	67562295	protein_coding	Tubb6	utr3	ENSMUSG00000001473	ProperStrand	10	chr9	15119722	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-9.9946
chr8	87452417	87452435	protein_coding	Mast1	intron	ENSMUSG00000053693	NonProperStrand	1	chr17	39985663	39985763	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-inf
chr8	89368533	89368613	protein_coding	N4bp1	utr3	ENSMUSG00000031652	ProperStrand	98	chr5	108336367	108336457	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-3.9471
chr11	107086560	107086645	protein_coding	Pitpnc1	intron	ENSMUSG00000040430	ProperStrand	46	chr16	23110908	23111001	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.2288
chr10	62802344	62802362	protein_coding	Sirt1	intron	ENSMUSG00000020063	NonProperStrand	116	chr5	35253473	35253541	protein_coding	Htt	utr3	ENSMUSG00000029104	ProperStrand	73	1	-11.5949
chr13	103895241	103895257	protein_coding	Mast4	intron	ENSMUSG00000034751	ProperStrand	150	chr9	120038467	120038551	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.5275
chr11	120681942	120682022	protein_coding	Fasn	exon	ENSMUSG00000025153	ProperStrand	298	chr15	79908929	79909019	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-2.4997
chr10	23505152	23505193	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	chr2	103880852	103880956	snoRNA	ENSMUSG00000087739_SCARNA21	.	ENSMUSG00000087739	ProperStrand	50	5	-8.2366
chr5	66089040	66089079	protein_coding	Pds5a	utr5	ENSMUSG00000029202	ProperStrand	62	chr1	162966007	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-3.5427
chr7	105762795	105762895	protein_coding	2210018M11Rik	intron	ENSMUSG00000035401	ProperStrand	24	chr1	173041632	173041649	tRNA	tRNA710-ValCAC	.	499847	ProperStrand	206	1	-12.6959
chr8	109894549	109895122	protein_coding	Nfat5	utr3	ENSMUSG00000003847	ProperStrand	29	chr8	129468743	129468799	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	4	-17.9864
chr2	22444728	22444818	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	chr2	130101972	130102052	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-0.7332
chr14	122506651	122522948	protein_coding	Tm9sf2	exon	ENSMUSG00000025544	ProperStrand	12	chr1	162967519	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	4	-19.7487
chr15	25737850	25737886	protein_coding	Myo10	exon	ENSMUSG00000022272	ProperStrand	168	chr9	120039583	120039622	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.5900
chr19	45090700	45101122	protein_coding	Lzts2	utr3	ENSMUSG00000035342	ProperStrand	14	chr16	23110829	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-4.0210
chr2	26493382	26493482	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr12	110887828	110887893	snoRNA	ENSMUSG00000084549_SNORD113	.	ENSMUSG00000084549	ProperStrand	196	1	-1.7062
chr9	114628979	114629709	protein_coding	Dync1li1	exon	ENSMUSG00000032435	ProperStrand	33	chr9	15118329	15118378	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	5	-18.5555
chr15	79191801	79191901	protein_coding	Tmem184b	utr3	ENSMUSG00000009035	ProperStrand	37	chr6	94776857	94776877	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	4	-21.5830
chr9	115135820	115135846	protein_coding	Osbpl10	exon	ENSMUSG00000040875	ProperStrand	6	chr3	84995363	84995380	protein_coding	Arfip1	intron	ENSMUSG00000074513	NonProperStrand	56	1	-17.8126
chr15	79619572	79619672	protein_coding	Cbx6	utr3	ENSMUSG00000089715	ProperStrand	16	chr1	162967514	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-6.0334
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr11	70475920	70475937	protein_coding	Eno3	utr3	ENSMUSG00000060600	ProperStrand	3	1	-14.1554
chrX	140781239	140782529	protein_coding-noncoding	Alg13	utr3	ENSMUSG00000041718	ProperStrand	87	chr4	136113570	136114414	protein_coding	Kdm1a	exon	ENSMUSG00000036940	ProperStrand	83	10	-19.3535
chr14	17462100	17462180	protein_coding	Rarb	intron	ENSMUSG00000017491	NonProperStrand	9	chr14	78266939	78267029	protein_coding	Dnajc15	intron	ENSMUSG00000022013	NonProperStrand	3	1	-inf
chr4	147836943	147837024	protein_coding	Mtor	exon	ENSMUSG00000028991	ProperStrand	65	chr1	162966813	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-6.1010
chr3	121160270	121160297	protein_coding	Cnn3	exon	ENSMUSG00000053931	ProperStrand	77	chr11	69481363	69481407	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-2.7564
chr8	89408874	89408890	protein_coding	N4bp1	utr5	ENSMUSG00000031652	ProperStrand	98	chr3	88737532	88737580	protein_coding	Dap3	exon	ENSMUSG00000068921	ProperStrand	58	1	-12.3964
chr19	5800061	5801790	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr19	8799830	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	2	-0.9420
chr14	72301755	72301771	SINE	B4	B4	chr14B472301692	NonProperStrand	99	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-7.9256
mmu-miR-7033-5p	2	19	miRNA	mmu-miR-7033-5p	.	mmu-miR-7033-5p	ProperStrand	25	chr2	26493365	26493484	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	3	-12.7613
chr4	40670724	40670804	protein_coding	Dnaja1	utr5	ENSMUSG00000028410	ProperStrand	20	chr4	41144147	41144237	protein_coding	Ubap2	intron	ENSMUSG00000028433	ProperStrand	292	1	-12.3683
chr11	33061172	33061223	protein_coding	Npm1	exon	ENSMUSG00000057113	ProperStrand	352	chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	1	-6.3133
chr5	123622050	123622066	protein_coding	Hpd	exon	ENSMUSG00000029445	ProperStrand	254	chr17	24665421	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-2.3051
chr2	27384084	27384102	protein_coding	Wdr5	intron	ENSMUSG00000026917	NonProperStrand	2	chr14	31827478	31827542	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-14.4005
chr17	88077661	88077677	protein_coding	Msh2	exon	ENSMUSG00000024151	ProperStrand	124	chr4	129306211	129306277	protein_coding	Txlna	exon	ENSMUSG00000053841	ProperStrand	37	1	-12.8325
chr10	41644311	41644329	protein_coding	Armc2	exon	ENSMUSG00000071324	ProperStrand	281	chr11	6428102	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-0.8157
chr7	108839221	108839311	protein_coding	Clpb	intron	ENSMUSG00000001829	ProperStrand	44	chr7	116663633	116663712	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.0569
chr4	123301924	123301958	protein_coding	Macf1	intron	ENSMUSG00000028649	ProperStrand	320	chr5	27919298	27919315	protein_coding	Dpp6	intron	ENSMUSG00000061576	NonProperStrand	32	1	-11.2280
chrX	103382604	103398906	protein_coding	Pgk1	exon	ENSMUSG00000062070	ProperStrand	484	chr9	15118255	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	8	-7.6465
chr1	33828651	33828669	protein_coding	Zfp451	intron	ENSMUSG00000042197	NonProperStrand	393	chr2	166888977	166889028	snoRNA	ENSMUSG00000077515_SNORD12	.	ENSMUSG00000077515	ProperStrand	191	1	-7.2389
chr5	32660353	32660369	protein_coding	Plb1	intron	ENSMUSG00000029134	NonProperStrand	10	chrX	91445159	91446230	protein_coding	Eif2s3x	exon	ENSMUSG00000035150	ProperStrand	55	1	-17.1103
chr11	116535477	116535531	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr5	143874599	143874615	protein_coding	Rnf216	utr5	ENSMUSG00000045078	NonProperStrand	29	1	-7.3570
chr14	15589930	15592845	protein_coding	Slc4a7	exon	ENSMUSG00000021733	ProperStrand	24	chr18	75161568	75161598	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	2	-14.3738
chr4	57867857	57867930	protein_coding	Gm20459	exon	ENSMUSG00000089945	ProperStrand	31	chr1	88247755	88247818	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-6.3965
chr7	19722633	19722649	protein_coding	Fbxo46	utr3	ENSMUSG00000050428	NonProperStrand	24	chr7	116663719	116663770	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-7.0482
chr2	38012954	38012970	protein_coding	Dennd1a	intron	ENSMUSG00000035392	NonProperStrand	128	chr2	144087348	144087375	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-5.0624
chr15	98350146	98350264	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	chr12	92811870	92811910	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	1	-0.8340
chr3	156224612	156224628	lincRNA	4930570G19Rik	exon	ENSMUSG00000085084	ProperStrand	326	chr19	6325158	6325214	protein_coding	Cdc42bpg	utr3	ENSMUSG00000024769	ProperStrand	90	1	-9.1087
chr3	86031232	86031295	protein_coding	Lrba	intron	ENSMUSG00000028080	ProperStrand	39	chr10	110918580	110918670	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-4.2557
chr1	53409486	53409502	protein_coding	Asnsd1	utr5	ENSMUSG00000026095	NonProperStrand	105	chr4	63155725	63155782	protein_coding	Whrn	exon	ENSMUSG00000039137	ProperStrand	20	1	-14.4179
chr5	30111576	30111666	protein_coding	Dnajb6	utr3	ENSMUSG00000029131	ProperStrand	81	chr10	82773768	82773821	protein_coding	Slc41a2	intron	ENSMUSG00000034591	ProperStrand	26	25	-19.3250
chr14	77424372	77424388	protein_coding	9030625A04Rik	utr3	ENSMUSG00000044350	NonProperStrand	152	chr13	97900986	97901031	protein_coding	Nsa2	utr3	ENSMUSG00000060739	ProperStrand	9	1	-15.3319
chr3	108357502	108357628	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	chr4	86232430	86232464	snoRNA	ENSMUSG00000088958_Scarna8	.	ENSMUSG00000088958	ProperStrand	366	1	-1.4113
chr2	125453980	125453996	protein_coding	Shc4	utr3	ENSMUSG00000035109	NonProperStrand	6	chr4	131908709	131908783	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.3738
chr4	131888810	131888881	protein_coding	Rcc1	exon	ENSMUSG00000028896	ProperStrand	55	chr5	92485086	92485106	pseudogene	Gm15710	.	ENSMUSG00000084111	ProperStrand	28	2	-19.5923
chr4	124185593	124185612	LINE	L2	L2	chr4L2124185347	ProperStrand	4	chr2	158182202	158182279	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	3	-19.8076
chr13	84420969	84421059	protein_coding	Tmem161b	intron	ENSMUSG00000035762	ProperStrand	22	chr16	23111385	23111465	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.8747
chr15	85054813	85057431	protein_coding	Fbln1	exon	ENSMUSG00000006369	ProperStrand	32	chr11	69483136	69483236	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	4	-12.0178
chr7	130317692	130317727	protein_coding	Tnrc6a	exon	ENSMUSG00000052707	ProperStrand	37	chr18	35102297	35102337	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-7.5537
chr5	44447735	44447815	protein_coding	Prom1	intron	ENSMUSG00000029086	NonProperStrand	1	chr5	44419128	44419218	protein_coding	Prom1	intron	ENSMUSG00000029086	ProperStrand	12	1	-inf
chr12	110826817	110826871	miRNA	Mir3070b	.	ENSMUSG00000093209	ProperStrand	3	chr16	23110894	23110984	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-inf
chr4	35077682	35077700	protein_coding	Mob3b	intron	ENSMUSG00000073910	ProperStrand	13	chr18	35714218	35714257	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-6.4211
chr7	52226628	52226645	protein_coding	Cpt1c	exon	ENSMUSG00000007783	NonProperStrand	11	chr4	137212917	137212954	protein_coding	Usp48	utr3	ENSMUSG00000043411	ProperStrand	135	1	-15.1455
chr2	26493456	26493507	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr3	113827103	113827119	protein_coding	Col11a1	utr3	ENSMUSG00000027966	NonProperStrand	139	1	-4.5620
chr17	83878019	83878109	protein_coding	Eml4	utr3	ENSMUSG00000032624	ProperStrand	50	chr19	8800352	8800432	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	8	-22.2482
chr9	108230051	108230068	protein_coding	Rhoa	exon	ENSMUSG00000007815	ProperStrand	45	chr18	35714144	35714258	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-6.7013
chr7	51505505	51505582	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	NonProperStrand	2	chr16	23110965	23111005	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	NonProperStrand	93	2	-inf
chr12	86685245	86685262	protein_coding	Tmed10	exon	ENSMUSG00000021248	ProperStrand	34	chr16	23110827	23110872	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.8923
chr17	39980044	39980124	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr6	71832550	71832640	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	2	-1.2403
chr10	120709244	120712786	protein_coding	Tbc1d30	exon	ENSMUSG00000052302	ProperStrand	233	chr9	120038493	120038552	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-0.9349
chr11	58998822	58999513	protein_coding	Guk1	exon	ENSMUSG00000020444	ProperStrand	18	chr17	35087894	35087962	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-7.5975
chr10	90059578	90432676	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	chr16	23111374	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-0.9716
chr14	13176784	13176874	protein_coding	Fezf2	intron	ENSMUSG00000021743	ProperStrand	1	chr15	94490625	94490705	protein_coding	Tmem117	intron	ENSMUSG00000063296	ProperStrand	10	1	-inf
chr8	77643211	77644695	protein_coding	Mcm5	exon	ENSMUSG00000005410	ProperStrand	199	chr13	90238598	90238688	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	1	-6.2665
chr11	116471739	116485537	protein_coding	Rhbdf2	utr5	ENSMUSG00000020806	ProperStrand	20	chr19	8799833	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-7.1233
chr5	115782138	115782155	protein_coding	Srsf9	exon	ENSMUSG00000029538	ProperStrand	19	chr3	123210892	123210982	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-6.9819
chr19	10971434	10971513	protein_coding	Prpf19	intron	ENSMUSG00000024735	ProperStrand	75	chr5	130300460	130300550	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.1352
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr11	77523842	77523942	protein_coding	Nufip2	utr3	ENSMUSG00000037857	ProperStrand	36	1	-7.3861
chr6	71832545	71832830	protein_coding	Ptcd3	intron	ENSMUSG00000063884	ProperStrand	34	chr6	71832548	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	3	-15.3353
chr9	105355107	105355881	protein_coding	Atp2c1	exon	ENSMUSG00000032570	ProperStrand	21	chr16	23110912	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.5481
chr17	57162208	57162267	protein_coding	Khsrp	exon	ENSMUSG00000007670	ProperStrand	353	chr7	29135839	29136079	protein_coding	Rps16	exon	ENSMUSG00000037563	ProperStrand	191	1	-7.4513
chr10	128119881	128119971	protein_coding	Rab5b	exon	ENSMUSG00000000711	ProperStrand	14	chr9	15118284	15118364	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-6.2956
chr2	90235284	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	52381972	52382039	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	21	-20.0469
chr2	164796661	164796679	protein_coding	Slc12a5	intron	ENSMUSG00000017740	NonProperStrand	40	chr12	111930994	111931040	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	1	-9.0739
chr6	124867915	124867947	protein_coding	Ptms	utr5	ENSMUSG00000030122	ProperStrand	21	chr15	8952097	8956101	protein_coding	Ranbp3l	exon	ENSMUSG00000048424	ProperStrand	45	1	-16.0240
chr1	130240077	130240910	protein_coding	Mcm6	exon	ENSMUSG00000026355	ProperStrand	69	chr11	69481344	69481434	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-2.9499
chr7	52382011	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	chr10	23505559	23505621	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	3	-4.2946
chr10	87803530	87803550	protein_coding	Dram1	intron	ENSMUSG00000020057	ProperStrand	24	chr18	57514476	57514496	protein_coding	Prrc1	utr5	ENSMUSG00000024594	NonProperStrand	22	1	-17.1730
chr8	87267469	87267494	protein_coding	Nfix	intron	ENSMUSG00000001911	NonProperStrand	6	chr15	78733332	78733513	protein_coding	Sh3bp1	exon	ENSMUSG00000022436	ProperStrand	2	2	-inf
chr7	134176146	134185936	protein_coding	Kif22	exon	ENSMUSG00000030677	ProperStrand	63	chr16	23110857	23110990	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-2.1495
chr16	23110797	23110851	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr4	131866187	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-1.0368
chr8	37646656	37646736	protein_coding	Dlc1	exon	ENSMUSG00000031523	ProperStrand	89	chr6	85291631	85291721	protein_coding	Rab11fip5	exon	ENSMUSG00000051343	ProperStrand	16	1	-15.2188
chr4	28740417	28740433	protein_coding	Epha7	utr5	ENSMUSG00000028289	ProperStrand	6	chr11	69480651	69480670	protein_coding	Eif4a1	utr3	ENSMUSG00000059796	ProperStrand	108	1	-16.8204
chr8	83289194	83312707	protein_coding	Gab1	exon	ENSMUSG00000031714	ProperStrand	72	chr7	116664819	116664910	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-4.0002
chr4	21922274	21922291	protein_coding-noncoding	6230409E13Rik	utr5	ENSMUSG00000028246	ProperStrand	18	chr4	131908356	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.4481
chr2	164645669	164645706	protein_coding	Zswim3	exon	ENSMUSG00000045822	ProperStrand	9	chr17	31120939	31120955	protein_coding	Umodl1	exon	ENSMUSG00000054134	ProperStrand	24	1	-19.0204
chr14	54988012	54988112	protein_coding	Oxa1l	exon	ENSMUSG00000000959	ProperStrand	31	chr11	101466313	101466351	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	1	-10.2030
chr13	34975741	34975821	protein_coding	Prpf4b	exon	ENSMUSG00000021413	ProperStrand	50	chr11	120331426	120332804	protein_coding	Hgs	exon	ENSMUSG00000025793	ProperStrand	20	1	-15.8821
chr14	13134698	13134750	protein_coding	3830406C13Rik	utr3	ENSMUSG00000033111	ProperStrand	1	chr16	23110919	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr11	113626000	113626090	LTR	MTE2a	MaLR	chr11MTE2a113625945	NonProperStrand	1	chr11	113626211	113626291	SINE	B3	B2	chr11B3113626124	NonProperStrand	1	1	-inf
chr19	8798484	8798550	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	chr16	20684360	20684386	snoRNA	ENSMUSG00000077239_Snord66	.	ENSMUSG00000077239	ProperStrand	159	1	-3.3700
chr4	24830343	24830408	protein_coding	Ndufaf4	utr3	ENSMUSG00000028261	ProperStrand	5	chr8	73419704	73419774	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-8.1065
mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr5	92481940	92482000	protein_coding	G3bp2	utr3	ENSMUSG00000029405	ProperStrand	78	2	-8.8324
chr4	153396216	153396232	lincRNA	1190007F08Rik	exon	ENSMUSG00000078350	NonProperStrand	1	chr19	9043975	9044336	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	1	-inf
chr3	153573527	153573562	snoRNA	ENSMUSG00000064731_Snord45b	.	ENSMUSG00000064731	ProperStrand	205	chr9	40611669	40611736	snoRNA	ENSMUSG00000075876_Snord14c	.	ENSMUSG00000075876	ProperStrand	104	1	-9.7449
chr9	65127126	65127142	protein_coding	Cilp	exon	ENSMUSG00000042254	ProperStrand	212	chr11	62416602	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-2.8144
chr17	47928467	47928485	protein_coding	Tfeb	exon	ENSMUSG00000023990	ProperStrand	78	chr2	109516160	109516176	protein_coding	Bdnf	utr5	ENSMUSG00000048482	NonProperStrand	47	1	-13.2828
chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	chr2	130103751	130103808	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-3.4212
chr18	38488491	38488581	protein_coding	Gnpda1	utr3	ENSMUSG00000052102	ProperStrand	16	chr11	97643006	97643090	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.9320
chr11	77995188	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	chr16	23109052	23109093	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	2	-1.8569
chr11	84692048	84692083	protein_coding	Pigw	intron	ENSMUSG00000045140	ProperStrand	1	chr11	62416971	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-inf
chr3	134151041	134151057	lincRNA	Gm16742	intron	ENSMUSG00000084777	NonProperStrand	42	chr9	120038467	120038545	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.6915
chr17	33960237	33961440	protein_coding	Rps28	utr5	ENSMUSG00000067288	ProperStrand	52	chr7	116663675	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	4	-9.7661
chr11	117191705	117191755	protein_coding	Sept9	intron	ENSMUSG00000059248	ProperStrand	60	chr11	97643001	97643091	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.4717
chr5	74489543	74489592	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr9	59513074	59513114	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	3	-2.0698
chr10	75994406	75994662	protein_coding	Lss	exon	ENSMUSG00000033105	ProperStrand	56	chr11	77995191	77995236	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-6.3190
chr6	39349262	39349325	protein_coding	Mkrn1	exon	ENSMUSG00000029922	ProperStrand	177	chr10	110918547	110918637	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-1.6188
chr11	33103307	33103325	protein_coding	Tlx3	exon	ENSMUSG00000040610	NonProperStrand	2	chr16	23110911	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-inf
chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	chr2	27281841	27281857	protein_coding	Vav2	exon	ENSMUSG00000009621	NonProperStrand	31	1	-11.2065
chr1	90123798	90124639	protein_coding	Heatr7b1	utr5	ENSMUSG00000079429	ProperStrand	147	chr1	162965531	162965588	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-3.2218
chr7	125297903	125354340	protein_coding	Smg1	exon	ENSMUSG00000030655	ProperStrand	70	chr5	130300460	130300551	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-4.0145
chr19	8799030	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	chr19	8799830	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	5	-0.8031
chr4	128422344	128423102	protein_coding	Phc2	exon	ENSMUSG00000028796	ProperStrand	14	chr19	8798743	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-7.7004
chr13	8834610	8834663	protein_coding	Wdr37	exon	ENSMUSG00000021147	ProperStrand	8	chr7	29136611	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-14.8002
chr5	100855902	100855942	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr2	34631368	34631468	protein_coding	Hspa5	exon	ENSMUSG00000026864	ProperStrand	181	2	-7.4543
chr19	8800374	8800478	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	chr4	122970435	122970526	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	13	-7.1286
chr11	116535913	116535982	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr19	57538881	57547193	protein_coding	Trub1	exon	ENSMUSG00000025086	ProperStrand	19	1	-8.2132
chr7	134606140	134606240	protein_coding	Prr14	intron	ENSMUSG00000030822	ProperStrand	6	chr4	122970451	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-12.1637
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr4	116826696	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	3	-0.8717
chr3	35754573	35754651	protein_coding	Atp11b	utr3	ENSMUSG00000037400	ProperStrand	39	chr4	131908303	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.0833
chr12	46793839	46793919	LINE	Lx	L1	chr12Lx46793690	NonProperStrand	2	chr9	13733832	13733922	LINE	L1_Mus3	L1	chr9L1_Mus313733485	NonProperStrand	1	1	-inf
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr11	62416951	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-0.7056
chr4	141741651	141741751	protein_coding	Kazn	intron	ENSMUSG00000040606	ProperStrand	123	chr19	8799024	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-4.4431
chr6	122657742	122661572	protein_coding	Nanog	utr5	ENSMUSG00000012396	ProperStrand	66	chr18	35716685	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-7.6910
chr9	15130758	15130819	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	chr1	74410963	74411124	protein_coding	Gm216	exon	ENSMUSG00000073650	ProperStrand	33	1	-10.4186
chr7	148634742	148634842	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	NonProperStrand	18	chr11	62416949	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	NonProperStrand	3	1	-inf
chr11	74718959	74719009	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	chr6	124665423	124665523	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	1	-2.8571
chr16	8987287	8987304	LTR	ORR1B1-int	MaLR	chr16ORR1B1-int8986967	ProperStrand	7	chr11	6428105	6428170	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-7.4403
chr4	43505805	43505895	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr16	76292808	76292851	protein_coding	Nrip1	exon	ENSMUSG00000048490	ProperStrand	50	2	-5.8135
chr10	80788483	80788563	protein_coding	2510012J08Rik	exon	ENSMUSG00000034889	ProperStrand	16	chr8	98269964	98270054	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-8.1880
chr4	91012543	91012564	protein_coding	Elavl2	intron	ENSMUSG00000008489	ProperStrand	52	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-10.7164
chr6	38384298	38384314	protein_coding	Ubn2	exon	ENSMUSG00000038538	NonProperStrand	4	chr2	74582202	74582218	protein_coding	Hoxd3	exon	ENSMUSG00000079277	NonProperStrand	14	1	-inf
chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	chr5	145317439	145317471	protein_coding	Nptx2	utr3	ENSMUSG00000059991	ProperStrand	15	1	-9.7858
chr4	43505721	43505811	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr16	87419199	87419279	snoRNA	ENSMUSG00000065647_SNORA2	.	ENSMUSG00000065647	ProperStrand	123	1	-1.8557
chr7	34994888	34994953	protein_coding-noncoding	Gpi1	utr3	ENSMUSG00000036427	ProperStrand	19	chr9	15119646	15119736	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.7702
chr4	88005240	88005797	protein_coding	BC057079	exon	ENSMUSG00000038368	ProperStrand	52	chr4	41150098	41150143	snoRNA	ENSMUSG00000089265_SNORD121A	.	ENSMUSG00000089265	ProperStrand	370	1	-9.9569
chr15	99610688	99610774	protein_coding	Lima1	utr3	ENSMUSG00000023022	ProperStrand	159	chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	3	-15.4411
chr1	77488309	77488347	protein_coding	Epha4	intron	ENSMUSG00000026235	ProperStrand	57	chr16	23110828	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-0.8756
chr17	66468411	66468427	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	chr1	72301655	72301769	snRNA	ENSMUSG00000093333_AC120136.3	.	ENSMUSG00000093333	ProperStrand	68	1	-9.6042
chr9	65127126	65127142	protein_coding	Cilp	exon	ENSMUSG00000042254	ProperStrand	212	chr5	130300466	130300498	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-0.6974
chr14	66253968	66253985	protein_coding	Gm600	exon	ENSMUSG00000061356	NonProperStrand	1	chr7	116663711	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-inf
chr1	183853750	183853767	protein_coding	Enah	exon	ENSMUSG00000022995	NonProperStrand	33	chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	1	-9.7077
chrX	103398233	103398272	protein_coding	Pgk1	exon	ENSMUSG00000062070	ProperStrand	484	chr1	162965548	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-1.4499
chr4	122966314	122967498	protein_coding	Pabpc4	exon	ENSMUSG00000011257	ProperStrand	85	chr8	32260371	32260414	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	4	-12.8932
chr17	57162517	57162638	protein_coding	Khsrp	exon	ENSMUSG00000007670	ProperStrand	353	chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	1	-4.6316
chr2	32196450	32196470	protein_coding	Dnm1	intron	ENSMUSG00000026825	NonProperStrand	8	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-12.3107
chr6	83105563	83105580	protein_coding-noncoding	Wdr54	utr3	ENSMUSG00000030032	NonProperStrand	10	chr4	137116343	137116396	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	1	-11.7625
chr3	96654255	96654271	protein_coding	Pdzk1	exon	ENSMUSG00000038298	ProperStrand	101	chr1	162965531	162965564	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.3625
chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	chr14	76247711	76247778	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-0.9872
chr10	79578617	79578651	protein_coding	Stk11	utr5	ENSMUSG00000003068	ProperStrand	24	chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	1	-10.6417
chr1	34252816	34313398	protein_coding	Dst	utr5	ENSMUSG00000026131	ProperStrand	461	chr1	162965534	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	12	-13.7415
chr2	11522267	11522298	protein_coding	Rbm17	exon	ENSMUSG00000037197	ProperStrand	50	chr11	97642951	97643006	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.7879
chr7	109147588	109161749	protein_coding	Numa1	exon	ENSMUSG00000066306	ProperStrand	148	chr4	131908689	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-0.6944
chr1	193604185	193604275	protein_coding	Lpgat1	utr3	ENSMUSG00000026623	ProperStrand	31	chr16	23111694	23111774	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.0285
chr9	39358287	39358304	protein_coding	Olfr958	exon	ENSMUSG00000050853	NonProperStrand	266	chr2	26493442	26493499	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-1.2638
chr4	154351039	154351076	protein_coding	Pank4	intron	ENSMUSG00000029056	ProperStrand	15	chr7	116664871	116664924	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-5.1476
chr4	140758375	140758431	protein_coding	Fbxo42	utr3	ENSMUSG00000028920	ProperStrand	91	chr4	96412508	96412526	protein_coding	Gm12695	intron	ENSMUSG00000078639	ProperStrand	110	1	-11.2591
chr5	31507447	31508415	protein_coding	Ppm1g	exon	ENSMUSG00000029147	NonProperStrand	2	chr16	57391579	57391673	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	2	-inf
chr12	110784639	110784739	lincRNA	Meg3	exon	ENSMUSG00000021268	ProperStrand	61	chrX	34622906	34622923	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-3.1413
chr10	34020247	34020265	protein_coding	Tspyl4	utr3	ENSMUSG00000039485	ProperStrand	5	chr10	23505204	23505254	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-5.7809
chr12	17557683	17557708	protein_coding	Odc1	utr3	ENSMUSG00000011179	ProperStrand	173	chr1	162965999	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-1.7819
chr2	167836657	167836679	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	chrX	66025308	66056787	protein_coding	Fmr1nb	exon	ENSMUSG00000062170	ProperStrand	7	1	-16.5963
chr17	35822057	35822257	protein_coding	Ddr1	exon	ENSMUSG00000003534	ProperStrand	129	chr1	88247742	88247862	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	2	-6.1694
chr6	134819651	134819738	protein_coding	Gpr19	exon	ENSMUSG00000032641	ProperStrand	27	chr3	10348838	10348860	protein_coding	Zfand1	intron	ENSMUSG00000039795	ProperStrand	8	1	-18.5476
chr4	41666900	41666921	protein_coding	Dctn3	exon	ENSMUSG00000028447	ProperStrand	4	chr7	148634771	148634834	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-9.5448
chr2	152709934	152709995	protein_coding	Tpx2	exon	ENSMUSG00000027469	ProperStrand	111	chr5	130295416	130295507	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	14	-19.8184
chr13	55414103	55414145	protein_coding	Nsd1	exon	ENSMUSG00000021488	ProperStrand	186	chr17	36000485	36000501	protein_coding	Nrm	exon	ENSMUSG00000059791	ProperStrand	253	1	-8.1649
chr5	110735902	110737955	protein_coding	Pole	exon	ENSMUSG00000007080	ProperStrand	125	chr15	34370545	34370635	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	4	-8.3138
chr12	72085508	72085525	protein_coding	Psma3	exon	ENSMUSG00000060073	NonProperStrand	2	chr10	41644311	41644329	protein_coding	Armc2	exon	ENSMUSG00000071324	ProperStrand	281	1	-17.9150
chrX	156315499	156315519	protein_coding	Sh3kbp1	intron	ENSMUSG00000040990	ProperStrand	67	chr17	35087894	35087946	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-4.9861
chr13	51743565	51743662	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	chr3	108357255	108357376	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	6	-2.2710
chr2	35568490	35568679	protein_coding	Dab2ip	exon	ENSMUSG00000026883	ProperStrand	93	chr9	104955815	104955833	protein_coding	Mrpl3	exon	ENSMUSG00000032563	ProperStrand	13	2	-19.8796
chr18	57596135	57596226	lincRNA	4930511M06Rik	intron	ENSMUSG00000086607	NonProperStrand	2	chr12	75339915	75339995	protein_coding	Syt16	intron	ENSMUSG00000044912	ProperStrand	5	1	-21.6030
chr7	13639915	13639934	protein_coding	Mzf1	utr5	ENSMUSG00000030380	NonProperStrand	14	chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-10.8145
chr15	103022330	103027139	protein_coding	Cbx5	utr3	ENSMUSG00000009575	ProperStrand	98	chr4	131908236	131908338	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	11	-16.7396
chr8	90665913	90665933	protein_coding	Heatr3	intron	ENSMUSG00000031657	ProperStrand	24	chr19	45009586	45009611	protein_coding	Fam178a	exon	ENSMUSG00000036097	ProperStrand	29	1	-16.6952
chr15	98688266	98688304	protein_coding	Mll2	exon	ENSMUSG00000048154	ProperStrand	170	chr2	112836736	112836752	protein_coding	Ryr3	exon	ENSMUSG00000057378	ProperStrand	15	1	-14.0468
chr19	9090323	9090413	protein_coding	Ahnak	exon	ENSMUSG00000069833	ProperStrand	103	chr7	51505223	51505309	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	1	-7.0753
chrX	84483719	84483741	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr7	52237221	52238871	protein_coding	Prmt1	exon	ENSMUSG00000052429	ProperStrand	21	1	-10.3705
chr14	119301651	119301667	protein_coding	Dzip1	intron	ENSMUSG00000042156	NonProperStrand	5	chr11	6428089	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-8.1751
chr8	25656321	25656338	protein_coding	Ido2	intron	ENSMUSG00000031549	NonProperStrand	29	chr8	73419713	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.4906
chr6	32121684	32121701	protein_coding	Plxna4	intron	ENSMUSG00000029765	NonProperStrand	15	chr11	62416575	62416653	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-7.9356
chr9	62643759	62643778	protein_coding	Fem1b	utr3	ENSMUSG00000032244	ProperStrand	111	chr1	129820987	129821003	protein_coding	Rab3gap1	intron	ENSMUSG00000036104	NonProperStrand	20	1	-14.3054
chr2	151368472	151386371	protein_coding	Fkbp1a	utr3	ENSMUSG00000032966	ProperStrand	36	chr16	23110915	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.6986
chr14	64147095	64147113	protein_coding	Mtmr9	exon	ENSMUSG00000035078	ProperStrand	14	chrX	7752870	7752886	protein_coding	Tbc1d25	exon	ENSMUSG00000039201	ProperStrand	126	1	-14.7944
chr8	74906578	74906594	protein_coding	Eps15l1	exon	ENSMUSG00000006276	NonProperStrand	42	chr5	122691914	122691930	protein_coding	Hvcn1	utr3	ENSMUSG00000064267	ProperStrand	182	1	-11.8066
chr14	76244709	76244725	antisense	Gm4285	.	ENSMUSG00000085829	ProperStrand	2	chr19	8798741	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	2	-inf
chr2	158182162	158182193	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	chr7	51505511	51505591	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	1	-1.1177
chr6	83111671	83111687	protein_coding	1700003E16Rik	exon	ENSMUSG00000030030	ProperStrand	352	chr9	44134947	44134994	protein_coding	Dpagt1	utr5	ENSMUSG00000032123	NonProperStrand	3	1	-16.1406
chr8	74446729	74446745	protein_coding	Zfp617	intron	ENSMUSG00000066880	NonProperStrand	208	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-3.4954
chr2	119207683	119208648	protein_coding	Ino80	exon	ENSMUSG00000034154	ProperStrand	54	chr16	23110533	23110574	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.6430
chr2	84518052	84518123	protein_coding	Tmx2	exon	ENSMUSG00000050043	ProperStrand	31	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.8473
chr1	193178908	193180258	protein_coding	Ppp2r5a	exon	ENSMUSG00000026626	ProperStrand	16	chr5	147646737	147646817	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	1	-10.6367
chr10	85755300	85755316	protein_coding	Syn3	utr3	ENSMUSG00000059602	ProperStrand	17	chr2	26494715	26494826	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.5152
chr11	116535914	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr6	92847515	92847534	protein_coding	Adamts9	intron	ENSMUSG00000030022	NonProperStrand	5	3	-19.8665
chr1	16091837	16091883	protein_coding	Rpl7	exon	ENSMUSG00000043716	ProperStrand	93	chr5	135857995	135858011	protein_coding	Pom121	exon	ENSMUSG00000053293	NonProperStrand	94	1	-11.5297
chr10	7521720	7524806	protein_coding	Ppil4	exon	ENSMUSG00000015757	ProperStrand	18	chr16	23111451	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.2408
chr6	82465509	82465531	protein_coding	Tacr1	intron	ENSMUSG00000030043	ProperStrand	2	chr18	35714158	35714241	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-10.7439
chr5	149043397	149047843	protein_coding	Mtus2	exon	ENSMUSG00000029651	NonProperStrand	13	chr5	108336363	108336409	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-7.9357
mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr13	51743579	51743663	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	3	-2.0265
chr9	37458897	37458972	protein_coding	Tbrg1	exon	ENSMUSG00000011114	ProperStrand	56	chr15	98350163	98350253	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-4.8936
chr11	120796894	120796984	LTR	MLT1B	MaLR	chr11MLT1B120796719	NonProperStrand	1	chr11	120796411	120796501	SINE	B1_Mus1	Alu	chr11B1_Mus1120796404	ProperStrand	1	1	-inf
chr12	111933285	111933307	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr2	130417491	130417591	protein_coding	Ubox5	utr3	ENSMUSG00000027300	ProperStrand	5	1	-13.4216
chr9	65010536	65010552	protein_coding	Igdcc3	intron	ENSMUSG00000032394	ProperStrand	17	chr19	8798484	8798508	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-7.7258
chr9	54743191	54743281	protein_coding	Ireb2	exon	ENSMUSG00000032293	ProperStrand	45	chr1	89673512	89673592	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-3.7941
chr2	74523573	74523589	protein_coding	Hoxd11	utr3	ENSMUSG00000042499	ProperStrand	5	chr16	23110913	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr6	62176935	62176954	protein_coding	Fam190a	intron	ENSMUSG00000039578	NonProperStrand	24	chr11	55296277	55296334	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-8.0119
chr19	4195334	4195399	protein_coding	Ppp1ca	utr3	ENSMUSG00000040385	ProperStrand	40	chr4	131865933	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-4.3134
chr9	95766103	95766203	protein_coding	Atr	exon	ENSMUSG00000032409	ProperStrand	44	chr16	23111458	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.7117
chr16	90221063	90221153	protein_coding	Sod1	utr5	ENSMUSG00000022982	ProperStrand	75	chr4	131865856	131865936	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.4339
chr1	46132856	46132937	protein_coding	Dnahc7b	intron	ENSMUSG00000041144	NonProperStrand	57	chr10	23505150	23505255	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-3.9596
chr6	27219105	27219123	LINE	Lx4B	L1	chr6Lx4B27218181	ProperStrand	2	chr1	193426159	193426237	protein_coding	Ints7	exon	ENSMUSG00000037461	ProperStrand	108	1	-19.1058
chr5	121655017	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	18	-2.1370
chr16	18795271	18795361	protein_coding	Cdc45	intron	ENSMUSG00000000028	ProperStrand	28	chr16	23111372	23111496	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	26	-19.8416
chr5	143664871	143667096	protein_coding	Actb	utr3	ENSMUSG00000029580	ProperStrand	446	chr16	23110896	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	31	-6.2759
chr5	74489231	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr13	38620190	38620206	protein_coding	Txndc5	utr5	ENSMUSG00000038991	NonProperStrand	2	2	-inf
chr1	187147635	187147663	protein_coding	Iars2	exon	ENSMUSG00000026618	ProperStrand	68	chr15	34370545	34370625	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	5	-14.3005
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr13	60837017	60837037	protein_coding	Dapk1	intron	ENSMUSG00000021559	ProperStrand	109	1	-6.6094
chr2	121949511	121949527	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	chr2	144087324	144087402	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	2	-6.1741
chr3	156224612	156224628	lincRNA	4930570G19Rik	exon	ENSMUSG00000085084	ProperStrand	326	chr11	98878344	98878371	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-3.0683
chr3	88124979	88125038	protein_coding	Cct3	exon	ENSMUSG00000001416	ProperStrand	82	chr4	131908236	131908355	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	9	-14.1992
chr11	59026889	59026939	protein_coding	Arf1	exon	ENSMUSG00000048076	ProperStrand	52	chr2	32818900	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-5.7511
chr5	134560433	134560523	Low_complexity	CT-rich	Low_complexity	chr5CT-rich134560445	ProperStrand	1	chr5	134560157	134560237	SINE	RSINE1	B4	chr5RSINE1134560098	ProperStrand	1	1	-inf
chr8	121070498	121070517	protein_coding	Cdh13	intron	ENSMUSG00000031841	ProperStrand	60	chr8	73419683	73419727	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.1303
chr2	18087863	18087914	protein_coding	Mllt10	intron	ENSMUSG00000026743	ProperStrand	30	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-8.3717
chr6	97061404	97061439	protein_coding	A130022J15Rik	utr3	ENSMUSG00000035245	NonProperStrand	2	chr3	123210854	123210933	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-9.1566
chr15	94472542	94472560	protein_coding	Tmem117	intron	ENSMUSG00000063296	NonProperStrand	31	chr16	23111440	23111486	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	NonProperStrand	38	1	-15.5613
chr2	29035330	29035347	protein_coding	Setx	exon	ENSMUSG00000043535	ProperStrand	187	chr11	69482388	69482443	snoRNA	ENSMUSG00000089542_snoU6-77	.	ENSMUSG00000089542	ProperStrand	138	1	-9.3626
chr19	25022588	25023699	protein_coding	Cbwd1	exon	ENSMUSG00000024878	ProperStrand	14	chr11	48616647	48616706	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	1	-12.3075
chr17	66468409	66468428	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	chr1	89673592	89673729	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	5	-4.7757
chr13	56962396	56962412	protein_coding	Trpc7	exon	ENSMUSG00000021541	ProperStrand	50	chr7	116664819	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	7	-19.3123
chr10	18393547	18393563	protein_coding	D10Bwg1379e	intron	ENSMUSG00000019852	NonProperStrand	120	chr8	26827320	26827337	protein_coding	Whsc1l1	utr3	ENSMUSG00000054823	NonProperStrand	17	1	-14.4832
chr11	88908403	88908433	protein_coding	Dgke	intron	ENSMUSG00000000276	ProperStrand	8	chr19	8963087	8963185	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-6.1145
chr19	30219717	30219742	protein_coding	Gldc	exon	ENSMUSG00000024827	ProperStrand	175	chr1	40053934	40053951	protein_coding	Map4k4	exon	ENSMUSG00000026074	ProperStrand	348	1	-7.6531
chr12	111932472	111932789	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr9	53424614	53424676	protein_coding	Cul5	utr3	ENSMUSG00000032030	ProperStrand	87	1	-7.5181
chr3	88372715	88372804	protein_coding	Ubqln4	utr3	ENSMUSG00000008604	ProperStrand	49	chr16	23110962	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-1.9572
chr8	28333855	28333927	LTR	RLTR23	ERV1	chr8RLTR2328333666	NonProperStrand	3	chr8	28324992	28325067	SINE	B3	B2	chr8B328324947	ProperStrand	3	3	-inf
chr7	114365770	114365850	LINE	L1_Mus3	L1	chr7L1_Mus3114365494	NonProperStrand	1	chr19	8800388	8800478	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-inf
chr1	157025059	157025123	protein_coding	Stx6	intron	ENSMUSG00000026470	ProperStrand	11	chr2	145076805	145209256	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	2	-17.6664
chr1	89105750	89105766	protein_coding	Chrng	exon	ENSMUSG00000026253	NonProperStrand	130	chr14	64081493	64081512	protein_coding	Fam167a	utr3	ENSMUSG00000035095	ProperStrand	80	1	-11.1821
chr6	120382119	120382173	protein_coding	Kdm5a	exon	ENSMUSG00000030180	ProperStrand	57	chr7	29136582	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.4519
chr8	3637251	3639520	protein_coding	Stxbp2	exon	ENSMUSG00000004626	ProperStrand	19	chr3	35725890	35725907	protein_coding	Atp11b	exon	ENSMUSG00000037400	NonProperStrand	18	1	-17.9854
mmu-miR-5100	5	20	miRNA	mmu-miR-5100	.	mmu-miR-5100	ProperStrand	132	chr2	130102052	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-3.8503
chr9	15120969	15121069	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	chrX	84483698	84483714	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-4.7124
chr9	71704221	71704237	protein_coding	Tcf12	exon	ENSMUSG00000032228	ProperStrand	26	chr1	192906741	192906761	protein_coding	Nsl1	utr3	ENSMUSG00000062510	ProperStrand	4	1	-19.7365
chr7	72451257	72451347	protein_coding	Tjp1	exon	ENSMUSG00000030516	ProperStrand	78	chr4	131908812	131908892	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-2.9447
chr11	33052774	33061140	protein_coding	Npm1	utr3	ENSMUSG00000057113	ProperStrand	352	chr7	150717298	150717425	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	9	-19.2785
chr2	180060199	180060216	protein_coding	Gata5	utr3	ENSMUSG00000015627	ProperStrand	8	chr8	73419662	73419743	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	4	-20.2528
chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	chr8	13876120	13876220	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-3.5469
chr1	45448521	45448537	protein_coding	Col5a2	exon	ENSMUSG00000026042	ProperStrand	184	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-1.6784
chr2	81169108	81169131	DNA	MER20	MER1_type	chr2MER2081168992	ProperStrand	1	chr10	23505222	23505278	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-inf
chr10	127152705	127152721	protein_coding	Myo1a	exon	ENSMUSG00000025401	ProperStrand	93	chr2	144087377	144087407	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-5.6830
chr14	71235415	71235440	LTR	MLT1A0	MaLR	chr14MLT1A071235349	NonProperStrand	1	chr6	72310453	72310553	protein_coding	Rnf181	utr3	ENSMUSG00000055850	ProperStrand	12	1	-inf
chr2	71694339	71694428	protein_coding	Itga6	utr3	ENSMUSG00000027111	ProperStrand	54	chr11	69481379	69481459	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.3924
chr14	99706260	99706360	protein_coding	Klf5	intron	ENSMUSG00000005148	ProperStrand	39	chr1	162965979	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-4.4154
chr17	35667722	35667765	protein_coding	Cchcr1	exon	ENSMUSG00000040312	ProperStrand	14	chr4	131865866	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.3681
chr15	81823657	81823686	protein_coding	Pppde2	utr3	ENSMUSG00000022472	ProperStrand	12	chr4	57154472	57154489	protein_coding	Epb4.1l4b	intron	ENSMUSG00000028434	NonProperStrand	54	1	-16.8494
chr2	129998672	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr2	22444295	22444322	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-2.7965
chr8	108765021	108765111	protein_coding	Prmt7	intron	ENSMUSG00000060098	ProperStrand	43	chr9	15119652	15119732	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.2218
chr6	48013766	48013866	protein_coding	Zfp746	utr3	ENSMUSG00000057691	ProperStrand	23	chr15	98350146	98350201	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-6.6496
chr13	45042392	45042413	protein_coding	Dtnbp1	intron	ENSMUSG00000057531	ProperStrand	17	chr11	69483136	69483227	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-11.5478
chr10	80827249	80827349	protein_coding	Mfsd12	utr3	ENSMUSG00000034854	ProperStrand	7	chr9	120038613	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-7.2707
chr9	55357515	55357563	protein_coding	Etfa	intron	ENSMUSG00000032314	ProperStrand	20	chr10	23505151	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-13.7931
chr5	77380137	77380188	protein_coding	Ppat	utr5	ENSMUSG00000029246	ProperStrand	55	chr7	118219575	118219626	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-7.2404
chr11	78101484	78101511	protein_coding	2610507B11Rik	exon	ENSMUSG00000010277	ProperStrand	246	chr11	51551280	51551336	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	1	-4.9275
chr1	33828651	33828669	protein_coding	Zfp451	intron	ENSMUSG00000042197	NonProperStrand	393	chr3	34549868	34549932	protein_coding	Sox2	exon	ENSMUSG00000074637	ProperStrand	299	1	-6.3551
chr15	92195995	92196012	lincRNA	Gm16629	intron	ENSMUSG00000085294	NonProperStrand	1	chr5	108336363	108336408	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-inf
chr9	110282038	110283988	protein_coding	Scap	exon	ENSMUSG00000032485	ProperStrand	37	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.6429
chr2	121361276	121362852	protein_coding	Wdr76	exon	ENSMUSG00000027242	ProperStrand	25	chr2	26768408	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-7.3420
chr10	75719833	75719849	protein_coding	S100b	exon	ENSMUSG00000033208	ProperStrand	20	chr11	68886975	68887033	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-6.2916
chr4	131908370	131908482	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr15	79908929	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	4	-2.9891
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr11	78313939	78313956	protein_coding	Vtn	exon	ENSMUSG00000017344	ProperStrand	188	1	-10.8612
chrX	71589885	71589907	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr2	166890555	166890581	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-4.4699
chr4	43505844	43505934	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr2	89368462	89368479	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	6	-7.0500
chr18	43555792	43555811	protein_coding	Dpysl3	intron	ENSMUSG00000024501	NonProperStrand	4	chr8	77525163	77525218	protein_coding	Hmgxb4	exon	ENSMUSG00000034518	ProperStrand	25	1	-19.1451
chr2	93041640	93041726	protein_coding	Trp53i11	utr3	ENSMUSG00000068735	ProperStrand	46	chr3	108357313	108357403	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	2	-8.3349
chr11	87913128	87913145	processed_transcript	2210416O15Rik	.	ENSMUSG00000087498	ProperStrand	76	chr19	8800084	8800117	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-7.1374
chr5	138608507	138608597	protein_coding	Mcm7	exon	ENSMUSG00000029730	ProperStrand	258	chr5	74489596	74489676	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-1.3325
chr11	98027655	98028049	protein_coding	Med1	exon	ENSMUSG00000018160	ProperStrand	23	chr12	53000152	53000169	protein_coding	Heatr5a	exon	ENSMUSG00000035181	NonProperStrand	22	1	-17.2278
chr5	93367512	93367528	protein_coding	Shroom3	intron	ENSMUSG00000029381	ProperStrand	52	chr5	138625095	138625134	protein_coding	Taf6	exon	ENSMUSG00000036980	ProperStrand	11	1	-16.9912
chr5	30493207	30495066	protein_coding	Hadhb	exon	ENSMUSG00000059447	ProperStrand	7	chr16	23110557	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-6.6152
chr11	6520321	6520453	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	chr11	62416951	62416976	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	6	-8.4633
chr16	93757414	93757430	protein_coding	Dopey2	exon	ENSMUSG00000022946	ProperStrand	22	chr8	73419657	73419775	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-5.0290
chr7	134928414	134928430	protein_coding	Setd1a	exon	ENSMUSG00000042308	NonProperStrand	5	chr11	6428121	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-8.1751
chr19	21892490	21898289	protein_coding	Tmem2	exon	ENSMUSG00000024754	ProperStrand	133	chr5	120889875	120889892	protein_coding	Lhx5	intron	ENSMUSG00000029595	NonProperStrand	106	1	-10.5720
chr11	8392488	8392578	protein_coding	Tns3	exon	ENSMUSG00000020422	ProperStrand	81	chr5	111121111	111121191	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-5.8433
chr13	70743334	70743434	protein_coding	BC018507	exon	ENSMUSG00000034525	ProperStrand	43	chr17	35089181	35089231	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-6.1404
chr11	96668021	96668058	protein_coding	Cbx1	exon	ENSMUSG00000018666	ProperStrand	14	chr7	116664819	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	7	-inf
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr4	151730301	151730737	protein_coding	Chd5	exon	ENSMUSG00000005045	NonProperStrand	147	1	-4.1744
chr11	49447754	49447770	protein_coding	Flt4	exon	ENSMUSG00000020357	ProperStrand	37	chr16	23110940	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.7935
chr16	10088452	10088469	LTR	RMER10B	ERVL	chr16RMER10B10088331	NonProperStrand	14	chr2	26494789	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.9058
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr9	47608249	47608266	protein_coding	Cadm1	intron	ENSMUSG00000032076	ProperStrand	77	1	-8.0941
chr15	29157258	29157274	LINE	Lx8	L1	chr15Lx829156540	ProperStrand	19	chr3	10440013	10440030	protein_coding	Snx16	utr5	ENSMUSG00000027534	ProperStrand	4	1	-inf
chrX	117423351	117423368	protein_coding	Pcdh11x	intron	ENSMUSG00000034755	ProperStrand	15	chr7	116663633	116663708	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-5.1056
chr17	24647332	24647388	protein_coding	Traf7	intron	ENSMUSG00000052752	ProperStrand	28	chr12	88778631	88778688	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	3	-17.8129
chr4	116862584	116862662	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	chr7	52381973	52382011	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-2.5042
chr18	34380822	34380896	protein_coding	Apc	exon	ENSMUSG00000005871	ProperStrand	64	chr12	88488443	88496424	protein_coding	Pomt2	exon	ENSMUSG00000034126	NonProperStrand	331	1	-9.7617
chr17	34089249	34089405	protein_coding	Rps18	exon	ENSMUSG00000008668	ProperStrand	111	chr6	52193945	52193961	protein_coding	Hoxa11	intron	ENSMUSG00000038210	NonProperStrand	2	1	-19.4740
chr4	151851217	151851234	protein_coding	Nphp4	intron	ENSMUSG00000039577	ProperStrand	33	chr4	131865867	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.7641
chr12	78096288	78096311	LINE	HAL1-3A_ME	L1	chr12HAL1-3A_ME78096216	ProperStrand	3	chr2	130103782	130103824	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	3	-inf
chr11	6301105	6301201	protein_coding	Zmiz2	exon	ENSMUSG00000041164	ProperStrand	69	chr16	23110546	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-3.9791
chr3	87719816	87719862	protein_coding	Hdgf	utr3	ENSMUSG00000004897	ProperStrand	117	chr14	22487733	22487771	protein_coding	Myst4	exon	ENSMUSG00000021767	ProperStrand	151	3	-20.1214
chr3	48173730	48173810	LINE	L1_Mus2	L1	chr3L1_Mus248172217	ProperStrand	1	chr7	130300920	130301010	protein_coding	Tnrc6a	intron	ENSMUSG00000052707	NonProperStrand	6	1	-inf
chr8	36529522	36529538	protein_coding	Eri1	utr3	ENSMUSG00000031527	NonProperStrand	97	chr1	162966189	162966254	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-6.6222
chr6	71071870	71071889	LINE	L1MA8	L1	chr6L1MA871071845	ProperStrand	3	chr10	23505149	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-12.0722
chr4	3762155	3762427	protein_coding	Rps20	exon	ENSMUSG00000028234	ProperStrand	71	chr16	56035947	56036001	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	4	-19.9816
chr11	115740902	115740918	protein_coding	Myo15b	exon	ENSMUSG00000034427	NonProperStrand	9	chr7	29136535	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.9747
chr13	44964960	44965050	protein_coding	Jarid2	intron	ENSMUSG00000038518	ProperStrand	372	chr16	23111700	23111790	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	NonProperStrand	47	1	-10.1499
chr11	76241349	76241439	protein_coding	Abr	intron	ENSMUSG00000017631	ProperStrand	33	chr11	69481353	69481433	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-4.3164
chr8	124936905	124936962	protein_coding	Zc3h18	exon	ENSMUSG00000017478	ProperStrand	55	chr1	162965563	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.4352
chr13	99611326	99611396	protein_coding	Tnpo1	utr3	ENSMUSG00000009470	ProperStrand	56	chr14	76247711	76247753	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	3	-10.3775
chr7	136750033	136750075	protein_coding	Wdr11	exon	ENSMUSG00000042055	ProperStrand	24	chr18	75160712	75160776	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	3	-20.0126
chr3	89141894	89141941	protein_coding	Efna4	utr5	ENSMUSG00000028040	ProperStrand	8	chr6	115758029	115758119	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	7	-19.0954
chr18	60731722	60731744	protein_coding	Rbm22	utr3	ENSMUSG00000024604	ProperStrand	9	chr8	123652036	123652052	pseudogene	Foxl1	.	ENSMUSG00000043867	ProperStrand	17	1	-19.3679
chr9	78023109	78023182	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr17	39985195	39985307	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	6	-3.1802
chr2	90235299	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	35054391	35054409	protein_coding	Grk4	exon	ENSMUSG00000052783	ProperStrand	15	1	-7.2074
chr2	90235300	90235339	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr15	88518823	88518853	protein_coding	Brd1	exon	ENSMUSG00000022387	ProperStrand	70	1	-4.1696
chr7	25397593	25397611	protein_coding	Phldb3	exon	ENSMUSG00000074277	ProperStrand	25	chr9	15119967	15120030	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-9.0132
chr17	34077025	34077059	protein_coding	H2-Ke2	utr5	ENSMUSG00000024309	ProperStrand	8	chr11	60370927	60370943	protein_coding	Alkbh5	utr3	ENSMUSG00000042650	ProperStrand	203	1	-14.9934
chr6	115757992	115758119	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr7	52381973	52382007	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	2	-0.7255
chr1	191472935	191478825	protein_coding	Cenpf	exon	ENSMUSG00000026605	ProperStrand	44	chr10	23505149	23505217	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-3.1233
chr1	30999024	30999054	protein_coding	Ptp4a1	utr3	ENSMUSG00000026064	ProperStrand	26	chr16	23110909	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.4162
chr17	26321210	26324689	protein_coding	Axin1	exon	ENSMUSG00000024182	ProperStrand	28	chr6	115757994	115758074	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-6.9821
chr1	37529442	37529459	protein_coding	Mgat4a	intron	ENSMUSG00000026110	ProperStrand	16	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-14.3742
chr16	14185825	14185882	protein_coding	Nde1	exon	ENSMUSG00000022678	ProperStrand	23	chr1	40053934	40053950	protein_coding	Map4k4	exon	ENSMUSG00000026074	ProperStrand	348	1	-11.7320
chrX	71484717	71485011	protein_coding	Flna	exon	ENSMUSG00000031328	ProperStrand	134	chr14	76247753	76247833	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-2.7066
chr16	38545943	38545962	protein_coding	Poglut1	exon	ENSMUSG00000034064	ProperStrand	8	chr6	120467088	120468467	protein_coding	Cecr5	exon	ENSMUSG00000058979	ProperStrand	97	1	-16.4874
chr17	66468411	66468427	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	chr12	112779147	112779273	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	5	-8.8493
chr9	21158202	21158292	protein_coding	Slc44a2	utr3	ENSMUSG00000057193	ProperStrand	26	chr11	97643001	97643081	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	4	-13.1598
chr11	70795676	70795743	protein_coding	C1qbp	exon	ENSMUSG00000018446	ProperStrand	46	chr8	125626954	125627005	snoRNA	ENSMUSG00000064450_Snord68	.	ENSMUSG00000064450	ProperStrand	181	3	-inf
chr11	51858673	51858690	protein_coding	Cdkl3	intron	ENSMUSG00000020389	ProperStrand	14	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.3681
chr2	125157590	125157607	protein_coding	Fbn1	intron	ENSMUSG00000027204	NonProperStrand	32	chr1	162965530	162965588	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.4550
chr1	157854371	157854461	protein_coding	Tor1aip1	exon	ENSMUSG00000026466	ProperStrand	7	chr12	112779177	112779257	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-9.1300
chr10	80797342	80797358	protein_coding	Tbxa2r	exon	ENSMUSG00000034881	NonProperStrand	40	chr7	52382251	52382315	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	2	-14.4397
chr6	70794801	70794819	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chr11	108204937	108204953	protein_coding	Prkca	exon	ENSMUSG00000050965	ProperStrand	48	1	-11.8714
chr1	66741087	66741103	protein_coding	Unc80	exon	ENSMUSG00000055567	NonProperStrand	212	chr4	131865392	131865456	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-1.8000
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr7	133941051	133941195	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	1	-3.0180
chr12	58643589	58643606	protein_coding	Foxa1	exon	ENSMUSG00000035451	ProperStrand	25	chr11	69481341	69481460	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-4.8537
chrX	34667269	34667285	protein_coding	Nkap	exon	ENSMUSG00000016409	NonProperStrand	133	chr9	114422534	114422553	protein_coding	Trim71	exon	ENSMUSG00000079259	ProperStrand	162	1	-9.7231
chr2	154185686	154185703	protein_coding	Cdk5rap1	intron	ENSMUSG00000027487	NonProperStrand	3	chr9	41854626	41854645	protein_coding	Sorl1	exon	ENSMUSG00000049313	ProperStrand	112	1	-19.2971
chr2	104521996	104522069	protein_coding	Tcp11l1	exon	ENSMUSG00000027175	ProperStrand	5	chr2	32086148	32086188	protein_coding	Prrc2b	utr3	ENSMUSG00000039262	ProperStrand	344	1	-14.9714
chr8	37648949	37648996	protein_coding	Dlc1	intron	ENSMUSG00000031523	ProperStrand	89	chr15	79913300	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	3	-7.3958
chr7	52714021	52714496	protein_coding	Ftl1	exon	ENSMUSG00000050708	ProperStrand	807	chr3	68889026	68889076	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	4	-0.9132
chr3	32244500	32259923	protein_coding	Zmat3	exon	ENSMUSG00000027663	ProperStrand	62	chr7	3228538	3228554	protein_coding	Nlrp12	exon	ENSMUSG00000078817	ProperStrand	1	1	-inf
chr6	114258054	114258070	protein_coding	Slc6a1	exon	ENSMUSG00000030310	NonProperStrand	147	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-5.9543
chr14	50144888	50144905	protein_coding	Slc35f4	intron	ENSMUSG00000021852	ProperStrand	11	chr11	6428077	6428165	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-6.4917
chr11	80005751	80005838	protein_coding	Rnf135	intron	ENSMUSG00000020707	ProperStrand	2	chr16	23111464	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-8.0851
chr8	75071970	75071987	protein_coding	Med26	utr5	ENSMUSG00000045248	ProperStrand	45	chr1	93049128	93049173	protein_coding	Rbm44	exon	ENSMUSG00000070732	ProperStrand	4	1	-18.8960
chr6	77999226	77999246	LINE	Lx8	L1	chr6Lx877998852	ProperStrand	1	chr18	69656471	69656536	protein_coding	Tcf4	intron	ENSMUSG00000053477	ProperStrand	13	1	-inf
chr13	59737399	59737443	protein_coding	Golm1	utr3	ENSMUSG00000021556	ProperStrand	27	chr4	32891994	32892027	protein_coding	Ankrd6	utr3	ENSMUSG00000040183	ProperStrand	15	1	-17.7972
chr16	96391526	96391613	protein_coding	Lca5l	intron	ENSMUSG00000045275	NonProperStrand	210	chr7	52382010	52382039	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	4	-13.6458
chr2	30666852	30666902	protein_coding	Mettl11a	intron	ENSMUSG00000026857	ProperStrand	51	chr12	60774056	60774107	snoRNA	ENSMUSG00000077603_SNORA3	.	ENSMUSG00000077603	ProperStrand	185	1	-11.3821
chr9	78326781	78326881	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr17	13115707	13115784	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	1	-1.1931
chr3	41385149	41392909	protein_coding	Phf17	exon	ENSMUSG00000025764	ProperStrand	101	chr9	98345026	98345046	protein_coding	Rbp1	exon	ENSMUSG00000046402	ProperStrand	3	2	-inf
chr2	166888977	166889056	snoRNA	ENSMUSG00000077515_SNORD12	.	ENSMUSG00000077515	ProperStrand	191	chr7	29136525	29136611	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	8	-9.9545
chr11	101426070	101427037	protein_coding	Nbr1	exon	ENSMUSG00000017119	ProperStrand	91	chr1	133252361	133252441	protein_coding	Srgap2	intron	ENSMUSG00000026425	ProperStrand	299	1	-9.2589
chr14	55692201	55692286	protein_coding	Zfhx2	exon	ENSMUSG00000040721	ProperStrand	18	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-11.4194
chr6	71363327	71364861	protein_coding	Rmnd5a	exon	ENSMUSG00000002222	ProperStrand	38	chr6	51538968	51539016	protein_coding	Snx10	utr3	ENSMUSG00000038301	ProperStrand	9	1	-17.9268
chr11	103662029	103662046	protein_coding	Wnt3	intron	ENSMUSG00000000125	NonProperStrand	22	chr11	115105734	115105793	protein_coding	Tmem104	utr3	ENSMUSG00000045980	ProperStrand	4	1	-21.1342
chr7	63174899	63174925	protein_coding	Cyfip1	exon	ENSMUSG00000030447	ProperStrand	23	chr9	120037919	120038009	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-6.5933
chr17	39985560	39985654	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr12	60235136	60235180	snoRNA	ENSMUSG00000077505_SNORA26	.	ENSMUSG00000077505	ProperStrand	82	1	-5.3211
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr4	147996140	147996175	protein_coding	Tardbp	exon	ENSMUSG00000041459	ProperStrand	120	1	-5.6613
chr2	25206577	25206596	protein_coding	Man1b1	utr3	ENSMUSG00000036646	ProperStrand	57	chr11	69483136	69483194	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.5375
chr7	133726521	133726538	protein_coding	Cln3	exon	ENSMUSG00000030720	ProperStrand	87	chr18	75161108	75161171	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	1	-8.2779
chr1	63989647	63989664	LINE	L1MDa	L1	chr1L1MDa63989040	ProperStrand	4	chr9	45763206	45763265	protein_coding	Sidt2	utr5	ENSMUSG00000034908	ProperStrand	10	1	-19.3291
chr11	118306371	118306387	protein_coding	C1qtnf1	intron	ENSMUSG00000017446	ProperStrand	52	chr10	90432660	90432683	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	1	-10.9068
chr17	31985596	31985621	protein_coding	Sik1	exon	ENSMUSG00000024042	ProperStrand	55	chr17	24858602	24858752	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	2	-15.5147
chr2	76471638	76471695	protein_coding	Prkra	exon	ENSMUSG00000002731	ProperStrand	3	chr4	131908236	131908291	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-7.2242
chr1	71673828	71673899	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr4	131866155	131866245	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	6	-2.3710
chr5	14252800	14252816	protein_coding	Sema3e	utr3	ENSMUSG00000063531	ProperStrand	125	chr1	89673591	89673628	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-2.0003
chr2	118587121	118587385	protein_coding	A430105I19Rik	exon	ENSMUSG00000045838	ProperStrand	37	chr1	162965981	162966035	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-4.5165
chr16	18533277	18533322	protein_coding	Gnb1l	intron	ENSMUSG00000000884	NonProperStrand	7	chr4	131908706	131908796	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.0493
chr15	88916261	88916317	protein_coding	Trabd	exon	ENSMUSG00000015363	ProperStrand	12	chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	1	-12.7698
chr2	181316563	181316579	protein_coding	Uckl1	exon	ENSMUSG00000089917	ProperStrand	142	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-4.1807
chr4	116826560	116826961	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	chr11	68886928	68887008	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-1.5931
chr15	12251612	12251628	protein_coding	Golph3	exon	ENSMUSG00000022200	ProperStrand	35	chr10	110918557	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-4.4630
chr1	72898573	72898663	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	chr17	39985622	39985702	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-2.3759
chr7	29136058	29137218	protein_coding	Rps16	exon	ENSMUSG00000037563	ProperStrand	191	chr10	23505148	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-1.3555
chr9	109834340	109834391	protein_coding	Mtap4	utr5	ENSMUSG00000032479	ProperStrand	188	chr6	38621479	38621495	protein_coding	Clec2l	intron	ENSMUSG00000079598	ProperStrand	2	1	-18.9839
chr8	86446903	86446970	protein_coding	Lphn1	exon	ENSMUSG00000013033	ProperStrand	221	chr17	79451474	79451490	protein_coding	Qpct	utr5	ENSMUSG00000024084	ProperStrand	17	1	-13.2607
chr5	109124122	109132306	protein_coding	Fgfrl1	exon	ENSMUSG00000008090	ProperStrand	111	chr15	34370618	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-2.4556
chrX	84483702	84483744	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr13	96100611	96100692	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	1	-3.1813
chr11	116535953	116535982	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr17	24368324	24368400	protein_coding	Ccnf	exon	ENSMUSG00000072082	ProperStrand	149	1	-4.1558
chr6	72384205	72388923	protein_coding	Mat2a	utr3	ENSMUSG00000053907	ProperStrand	51	chr16	23111374	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-6.2143
chr8	31436465	31436482	LINE	Lx7	L1	chr8Lx731436390	ProperStrand	23	chr16	23110897	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.4133
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr9	37192069	37192086	protein_coding	Hepacam	intron	ENSMUSG00000046240	NonProperStrand	29	1	-9.2575
chr4	107532600	107532617	protein_coding	Lrp8	exon	ENSMUSG00000028613	NonProperStrand	7	chr4	116828378	116828453	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-12.8045
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr4	56910512	56910628	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-2.0626
chr13	58496626	58496964	protein_coding	Hnrnpk	exon	ENSMUSG00000021546	ProperStrand	117	chr14	76247817	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-2.9446
chr3	8666738	8666760	protein_coding	Hey1	intron	ENSMUSG00000040289	ProperStrand	26	chr16	23110529	23110558	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.9778
chr15	12802780	12802870	protein_coding	Drosha	intron	ENSMUSG00000022191	ProperStrand	163	chr8	129468756	129468836	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-2.5889
chr8	91556548	91556591	protein_coding	Sall1	exon	ENSMUSG00000031665	ProperStrand	96	chr10	69449146	69449230	protein_coding	Ank3	intron	ENSMUSG00000069601	NonProperStrand	19	4	-inf
chr2	146125208	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	chr11	98878344	98878455	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-4.1177
chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	chr5	115686318	115686335	protein_coding	Pop5	intron	ENSMUSG00000060152	NonProperStrand	2	1	-18.7816
chr17	15613036	15613059	protein_coding	Psmb1	exon	ENSMUSG00000014769	ProperStrand	19	chr11	6428123	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.3857
chr2	180510920	180510937	protein_coding	Bhlhe23	exon	ENSMUSG00000045493	NonProperStrand	28	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.7132
chr11	6428076	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr5	92485086	92485217	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	3	-0.9522
chr2	164250479	164250496	protein_coding	Sdc4	utr3	ENSMUSG00000017009	ProperStrand	177	chr8	39398814	39398837	protein_coding	Sgcz	intron	ENSMUSG00000039539	ProperStrand	46	1	-11.6789
chr3	21992714	21992731	protein_coding	Tbl1xr1	intron	ENSMUSG00000027630	ProperStrand	44	chr12	88778635	88778735	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	NonProperStrand	1	1	-inf
chr9	65049529	65049629	snRNA	ENSMUSG00000075930_U5	.	ENSMUSG00000075930	ProperStrand	175	chr1	162965978	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-3.2325
chr15	10525646	10529520	protein_coding	Rai14	exon	ENSMUSG00000022246	ProperStrand	180	chr7	29136553	29136631	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	5	-5.3253
chr6	86475119	86475200	protein_coding	Pcbp1	exon	ENSMUSG00000051695	ProperStrand	108	chr11	69481383	69481473	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-2.1814
chr16	17277564	17277602	protein_coding	Tmem191c	utr5	ENSMUSG00000055692	ProperStrand	16	chr11	69483136	69483236	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.9072
chr1	152268927	152269668	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	chr9	50423596	50423656	protein_coding	AU019823	exon	ENSMUSG00000059820	ProperStrand	5	1	-14.0745
chr12	114176648	114176746	protein_coding	Nudt14	exon	ENSMUSG00000002804	ProperStrand	3	chr16	23110968	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr8	108233712	108233729	protein_coding	4933405L10Rik	exon	ENSMUSG00000013158	ProperStrand	94	chr17	23685733	23685774	tRNA	tRNA995-ArgCCT	.	615959	ProperStrand	18	1	-14.8401
chr13	80636125	80636144	LINE	Lx8	L1	chr13Lx880635645	ProperStrand	20	chr11	117713990	117714029	protein_coding	Birc5	exon	ENSMUSG00000017716	ProperStrand	16	1	-18.0974
chr4	53873608	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	chr15	82980086	82980192	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	4	-10.4411
chr15	7823226	7834288	protein_coding	Wdr70	exon	ENSMUSG00000039828	ProperStrand	16	chr7	29136525	29136562	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.8105
chr3	89051041	89053003	protein_coding	Krtcap2	exon	ENSMUSG00000042747	ProperStrand	17	chr6	115757996	115758120	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-7.9927
chr11	77996560	77996589	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	chr4	132394417	132394462	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	1	-2.2231
chr11	98864926	98864951	protein_coding	Top2a	exon	ENSMUSG00000020914	ProperStrand	324	chr14	33005138	33005180	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	2	-2.2755
chr5	143722257	143722347	protein_coding	Fscn1	exon	ENSMUSG00000029581	ProperStrand	200	chr5	74489595	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-1.7046
chr6	113445919	113445936	protein_coding	Prrt3	exon	ENSMUSG00000045009	NonProperStrand	1	chr16	23110937	23110953	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr11	97607710	97607781	protein_coding	Cwc25	utr3	ENSMUSG00000018541	ProperStrand	4	chr19	8963088	8963178	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-7.6308
chr3	88124498	88124588	protein_coding	Cct3	exon	ENSMUSG00000001416	ProperStrand	82	chr19	8800375	8800455	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-2.9640
chr11	119131914	119131952	protein_coding	Gaa	exon	ENSMUSG00000025579	ProperStrand	149	chr2	127317007	127317024	protein_coding	Kcnip3	intron	ENSMUSG00000079056	NonProperStrand	18	1	-13.9310
chr15	77621539	77622169	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr4	116826468	116826568	protein_coding	Rps8	utr3	ENSMUSG00000047675	ProperStrand	262	1	-5.8860
chr17	34160073	34160271	protein_coding	Ring1	exon	ENSMUSG00000024325	ProperStrand	4	chr17	35088957	35089009	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-11.5063
chr11	100181927	100182027	protein_coding-noncoding	Eif1	utr5	ENSMUSG00000035530	ProperStrand	4	chr19	8798741	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	4	-inf
chr18	15392323	15392413	LTR	RMER17A2	ERVK	chr18RMER17A215391549	NonProperStrand	1	chr3	64935884	64935964	protein_coding	Kcnab1	intron	ENSMUSG00000027827	ProperStrand	5	1	-inf
chr2	103619548	103619629	protein_coding	Caprin1	exon	ENSMUSG00000027184	ProperStrand	145	chr2	103880826	103880916	snoRNA	ENSMUSG00000087739_SCARNA21	.	ENSMUSG00000087739	ProperStrand	50	1	-11.9091
chr15	103029790	103029843	protein_coding	Cbx5	utr3	ENSMUSG00000009575	ProperStrand	98	chr1	88247800	88247876	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-4.1574
chr8	48575791	48575881	protein_coding	D030016E14Rik	utr3	ENSMUSG00000038102	ProperStrand	15	chr4	131865868	131865948	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.2332
chr16	92808636	92808654	protein_coding	Runx1	intron	ENSMUSG00000022952	NonProperStrand	17	chr2	139504270	139504288	protein_coding	Ism1	utr5	ENSMUSG00000074766	ProperStrand	8	1	-19.2248
chr14	55264544	55264575	protein_coding	Acin1	exon	ENSMUSG00000022185	ProperStrand	67	chr1	187230919	187230949	protein_coding	Eprs	exon	ENSMUSG00000026615	ProperStrand	149	1	-11.2656
chr16	16316474	16316722	protein_coding	Dnm1l	exon	ENSMUSG00000022789	ProperStrand	29	chr4	131908767	131908810	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.3468
chr18	35716684	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	chr10	23505552	23505627	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	11	-1.0671
chr6	125123904	125124303	protein_coding	Ncapd2	exon	ENSMUSG00000038252	ProperStrand	170	chr9	120037987	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	7	-18.1436
chr1	177823041	177823057	protein_coding	Exo1	exon	ENSMUSG00000039748	ProperStrand	27	chr4	21606097	21606114	protein_coding	Prdm13	exon	ENSMUSG00000040478	ProperStrand	51	1	-15.2683
chr7	123248116	123248146	protein_coding	1110004F10Rik	utr3	ENSMUSG00000030663	ProperStrand	15	chr12	88778632	88778722	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-9.2944
chr2	90758153	90758170	protein_coding	Ptpmt1	exon	ENSMUSG00000063235	NonProperStrand	6	chr16	23111704	23111737	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-6.2752
chr1	189048118	189048136	protein_coding	Gpatch2	intron	ENSMUSG00000039210	ProperStrand	11	chr17	35088971	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-9.2969
chr5	110836550	110836623	protein_coding	Fbrsl1	intron	ENSMUSG00000043323	ProperStrand	131	chr1	162967491	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-2.1121
chr1	42755254	42755270	protein_coding	Pou3f3	exon	ENSMUSG00000045515	NonProperStrand	117	chr10	75398689	75399000	protein_coding	Chchd10	utr5	ENSMUSG00000049422	ProperStrand	140	1	-10.2714
chr11	115024802	115024902	protein_coding	Slc9a3r1	utr5	ENSMUSG00000020733	ProperStrand	7	chr12	110918201	110918221	snoRNA	ENSMUSG00000065749_AF357428	.	ENSMUSG00000065749	ProperStrand	218	1	-15.1565
chr10	80644331	80644691	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr8	74446729	74446745	protein_coding	Zfp617	intron	ENSMUSG00000066880	NonProperStrand	208	1	-3.7127
chr2	90235301	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	180404508	180404525	protein_coding	Dido1	intron	ENSMUSG00000038914	NonProperStrand	4	1	-10.0500
chr4	3762120	3762152	protein_coding	Rps20	exon	ENSMUSG00000028234	ProperStrand	71	chr14	65372817	65372889	snoRNA	ENSMUSG00000064442_SNORA36	.	ENSMUSG00000064442	ProperStrand	296	3	-20.8196
chr16	57391761	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr8	13876126	13876226	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-1.9934
chr2	26493433	26493518	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr11	80302329	80302348	protein_coding	Myo1d	intron	ENSMUSG00000035441	NonProperStrand	24	1	-8.0267
chr15	102301184	102316459	protein_coding	Pcbp2	utr5	ENSMUSG00000056851	ProperStrand	164	chr8	129468758	129468839	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	2	-4.5199
chr5	121828827	121828843	protein_coding	Trafd1	exon	ENSMUSG00000042726	ProperStrand	81	chr19	8798737	8798771	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-4.2276
chr16	31297573	31297619	protein_coding	Apod	exon	ENSMUSG00000022548	ProperStrand	10	chr16	23110470	23110529	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.8693
chr2	90850592	90859344	protein_coding	Celf1	utr3	ENSMUSG00000005506	ProperStrand	61	chr10	23505148	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-7.1524
chr8	129468743	129468896	protein_coding	Tomm20	intron	ENSMUSG00000058779	ProperStrand	55	chr8	129468743	129468869	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	5	-18.0311
chr15	100299084	100299101	lincRNA	5330439K02Rik	exon	ENSMUSG00000092050	NonProperStrand	36	chr17	24857755	24857803	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.1916
chr4	64785559	64785575	protein_coding	Pappa	utr5	ENSMUSG00000028370	ProperStrand	65	chr6	114704976	114705085	protein_coding	Atg7	intron	ENSMUSG00000030314	ProperStrand	26	5	-19.5927
chr6	47738069	47738123	misc_RNA	Y_RNA	.	ENSMUSG00000065701	ProperStrand	129	chr10	80641703	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	1	-6.0335
chr4	107729810	107729880	protein_coding	Scp2	intron	ENSMUSG00000028603	ProperStrand	23	chr6	118117988	118118005	protein_coding	Ret	exon	ENSMUSG00000030110	ProperStrand	3	1	-inf
chrX	67458741	67458757	LINE	Lx8	L1	chrXLx867458264	NonProperStrand	35	chr9	58402946	58402966	protein_coding	Gm10657	exon	ENSMUSG00000074273	NonProperStrand	1	1	-inf
chr3	153573528	153573573	snoRNA	ENSMUSG00000064731_Snord45b	.	ENSMUSG00000064731	ProperStrand	205	chr2	26493373	26493473	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-1.6382
chr4	143759094	143759174	LTR	RLTR19-int	ERVK	chr4RLTR19-int143759098	ProperStrand	1	chr4	143758849	143758939	LTR	RLTR20C	ERVK	chr4RLTR20C143758853	ProperStrand	1	1	-inf
chr1	72758328	72758349	protein_coding	Rpl37a	exon	ENSMUSG00000046330	ProperStrand	94	chr5	90727587	90727677	protein_coding	Ankrd17	exon	ENSMUSG00000055204	ProperStrand	77	1	-11.9097
chr2	165878309	165878347	protein_coding	Ncoa3	exon	ENSMUSG00000027678	ProperStrand	58	chr11	97642952	97643070	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-6.6774
chr19	5492651	5492675	protein_coding	Cfl1	exon	ENSMUSG00000056201	ProperStrand	88	chr19	8963116	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-3.0771
chr2	121250294	121258027	protein_coding	Pdia3	exon	ENSMUSG00000027248	ProperStrand	74	chr16	23110911	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-1.0172
chr3	11580450	11580466	LINE	Lx3A	L1	chr3Lx3A11580299	ProperStrand	53	chr13	8890424	8890473	protein_coding	Idi1	utr3	ENSMUSG00000058258	ProperStrand	21	1	-15.6623
chr1	31000084	31000142	protein_coding	Ptp4a1	exon	ENSMUSG00000026064	ProperStrand	26	chr16	23110464	23110523	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.9778
chr7	129059283	129060041	protein_coding	Scnn1b	exon	ENSMUSG00000030873	ProperStrand	26	chr7	29136577	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.8707
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr10	43670480	43670497	protein_coding	Aim1	utr3	ENSMUSG00000019866	NonProperStrand	16	1	-15.8432
chr1	174421856	174422054	protein_coding	Igsf9	exon	ENSMUSG00000037995	ProperStrand	13	chr2	26493403	26493483	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-6.7422
chr16	23111474	23111507	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr1	136787360	136788755	protein_coding	Ppp1r12b	exon	ENSMUSG00000073557	ProperStrand	21	2	-17.2866
chr1	39634128	39634144	protein_coding	Rnf149	utr5	ENSMUSG00000048234	NonProperStrand	20	chr2	130103448	130103503	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-10.2837
chr15	77772219	77772274	protein_coding	Foxred2	utr3	ENSMUSG00000016552	ProperStrand	8	chr16	23110913	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.2180
chr19	6306555	6306571	protein_coding	Cdc42bpg	utr5	ENSMUSG00000024769	ProperStrand	90	chr9	15119968	15120042	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-6.4492
chr1	59539683	59539700	protein_coding	Fzd7	utr5	ENSMUSG00000041075	ProperStrand	373	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-3.6698
chr5	115580501	115580517	protein_coding	Unc119b	exon	ENSMUSG00000046562	ProperStrand	20	chr16	23110828	23110961	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-6.8326
chr12	73885505	73895642	protein_coding	Ppm1a	exon	ENSMUSG00000021096	ProperStrand	53	chr16	23110909	23110999	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-0.9890
chr4	131908812	131908871	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	chr5	135529896	135529986	snoRNA	ENSMUSG00000088008_SCARNA20	.	ENSMUSG00000088008	ProperStrand	139	7	-5.5514
chr13	9833575	9833620	LINE	L1Md_T	L1	chr13L1Md_T9831266	NonProperStrand	15	chr16	23110470	23110570	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	NonProperStrand	16	1	-19.4575
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr4	116828379	116828452	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	2	-6.8242
chr5	89383967	89457318	protein_coding	Slc4a4	exon	ENSMUSG00000060961	NonProperStrand	195	chr7	29136525	29136579	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-0.6954
chr15	79585216	79585232	lincRNA	Gm16576	exon	ENSMUSG00000087543	NonProperStrand	55	chr17	24856635	24856686	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-6.5995
chr19	24552582	24552600	protein_coding	Pip5k1b	intron	ENSMUSG00000024867	NonProperStrand	40	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-8.0137
chr2	32818566	32819086	protein_coding	Rpl12	exon	ENSMUSG00000038900	ProperStrand	167	chr11	68886962	68887039	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-2.3061
chr2	129025554	129025644	protein_coding	Slc20a1	exon	ENSMUSG00000027397	ProperStrand	81	chr18	6112348	6112428	protein_coding	Arhgap12	utr5	ENSMUSG00000041225	ProperStrand	25	1	-14.4804
chr2	28398465	28399116	protein_coding	Ralgds	exon	ENSMUSG00000026821	ProperStrand	14	chr13	96374713	96374729	protein_coding	F2r	exon	ENSMUSG00000048376	NonProperStrand	88	1	-15.5139
chr5	34977723	34978029	protein_coding	Mfsd10	exon	ENSMUSG00000001082	ProperStrand	38	chr12	56086767	56086784	protein_coding	Baz1a	utr5	ENSMUSG00000035021	NonProperStrand	6	1	-18.4297
chr1	140860556	140860574	protein_coding	Dennd1b	intron	ENSMUSG00000056268	ProperStrand	23	chr17	24857719	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	8	-19.7194
chr11	116535920	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr8	98281271	98281371	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	1	-2.7919
chr2	73613164	73613182	protein_coding	Chn1	utr5	ENSMUSG00000056486	ProperStrand	9	chr17	24857717	24857807	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-5.8950
chr4	137864241	137865512	protein_coding	Ddost	exon	ENSMUSG00000028757	ProperStrand	49	chr10	62282246	62282288	protein_coding	Tet1	exon	ENSMUSG00000047146	ProperStrand	286	1	-10.5912
chr4	79650677	79650852	pseudogene	Gm11410	.	ENSMUSG00000083219	ProperStrand	47	chr19	8800356	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	6	-inf
chr9	44413215	44413234	protein_coding	Ddx6	intron	ENSMUSG00000032097	ProperStrand	59	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-7.7731
chr17	35272362	35273085	protein_coding	Bag6	utr5	ENSMUSG00000024392	ProperStrand	181	chr19	7289669	7289759	protein_coding	Cox8a	utr3	ENSMUSG00000035885	ProperStrand	32	1	-12.3693
chr13	99529044	99529116	protein_coding	Fcho2	intron	ENSMUSG00000041685	ProperStrand	10	chr9	15119648	15119738	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-6.0614
chr16	54467554	54467644	LINE	L1Md_A	L1	chr16L1Md_A54464778	ProperStrand	1	chr7	54443398	54443478	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-inf
chr6	120467088	120468467	protein_coding	Cecr5	exon	ENSMUSG00000058979	ProperStrand	97	chr7	118219582	118219640	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-3.2792
chr9	78023109	78023166	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr2	63936035	63936053	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-1.1036
chr11	95818795	95818864	protein_coding	Igf2bp1	utr3	ENSMUSG00000013415	ProperStrand	140	chr12	88778654	88778744	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-4.8432
chr17	31640574	31640590	protein_coding	Wdr4	exon	ENSMUSG00000024037	NonProperStrand	18	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-3.3354
chr10	80641588	80644037	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr19	8799017	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	7	-4.5089
chr13	113112821	113112840	protein_coding	Ankrd55	intron	ENSMUSG00000049985	NonProperStrand	3	chr10	23505204	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-6.9610
chr16	11144111	11144276	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr9	120038558	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	NonProperStrand	28	3	-19.0019
chr4	53776928	53776965	protein_coding	Fktn	utr3	ENSMUSG00000028414	ProperStrand	37	chr7	130336522	130336589	protein_coding	Tnrc6a	utr3	ENSMUSG00000052707	ProperStrand	37	1	-15.2518
chr4	125220888	125220988	protein_coding	Grik3	intron	ENSMUSG00000001985	ProperStrand	126	chr4	41150098	41150136	snoRNA	ENSMUSG00000089265_SNORD121A	.	ENSMUSG00000089265	ProperStrand	370	1	-8.1847
chr2	127416746	127416783	protein_coding	Mrps5	intron	ENSMUSG00000027374	ProperStrand	84	chr3	88497855	88497980	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	7	-20.7264
chr6	144947830	144947880	protein_coding	Bcat1	utr3	ENSMUSG00000030268	ProperStrand	49	chr9	63042015	63042031	protein_coding	Map2k5	exon	ENSMUSG00000058444	ProperStrand	193	1	-11.3782
chr2	90235292	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	8800355	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	34	-4.3468
chr5	34234244	34234262	protein_coding	Whsc1	utr5	ENSMUSG00000057406	ProperStrand	409	chr12	88778637	88778714	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-2.8591
chr3	65750512	65750561	protein_coding	Ccnl1	utr3	ENSMUSG00000027829	ProperStrand	29	chr14	76247742	76247842	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-5.5803
chr2	154198513	154198529	protein_coding	Cdk5rap1	utr5	ENSMUSG00000027487	ProperStrand	75	chr8	13416897	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-6.0141
chrX	131120650	131120703	protein_coding	Rpl36a	exon	ENSMUSG00000079435	ProperStrand	53	chr17	13112492	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	2	-7.9752
chr10	95018569	95018621	protein_coding	Nudt4	intron	ENSMUSG00000020029	NonProperStrand	5	chr11	69481433	69481479	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	NonProperStrand	24	2	-19.1878
chr11	68715790	68717966	protein_coding	Rpl26	exon	ENSMUSG00000060938	ProperStrand	130	chr10	23505152	23505282	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-2.4663
chr14	22483816	22483906	protein_coding	Myst4	exon	ENSMUSG00000021767	ProperStrand	151	chr18	35714205	35714285	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-1.8574
chr7	148634700	148634802	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	chr2	130103755	130103799	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	7	-5.8839
chr2	86138158	86138174	protein_coding	Olfr1052	exon	ENSMUSG00000047149	NonProperStrand	119	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-7.5595
chr4	21310517	21310607	LINE	L1Md_A	L1	chr4L1Md_A21308489	ProperStrand	2	chr7	116664811	116664891	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-9.7350
chr11	116535480	116535534	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr17	71990923	71990981	snoRNA	ENSMUSG00000092713_CT010429.1	.	ENSMUSG00000092713	ProperStrand	182	2	-6.3769
chr11	116938560	116938707	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	chr17	35087894	35087946	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	5	-1.5538
chr5	121658438	121658942	protein_coding	Rpl6	exon	ENSMUSG00000029614	ProperStrand	332	chr19	8800377	8800478	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	8	-10.7242
chr9	19462210	19462290	LINE	L1Md_A	L1	chr9L1Md_A19461964	ProperStrand	81	chr3	68889072	68889162	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	38	-19.4286
chr7	16912601	16912688	protein_coding	Sae1	utr3	ENSMUSG00000052833	ProperStrand	29	chr7	134671464	134671518	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-9.3346
chr16	75761550	75765200	protein_coding	Hspa13	exon	ENSMUSG00000032932	NonProperStrand	57	chr4	131908751	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.2943
chr17	46302099	46302409	protein_coding	Gtpbp2	exon	ENSMUSG00000023952	ProperStrand	21	chr5	130300531	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.4412
chr13	38283430	38283447	protein_coding	Dsp	exon	ENSMUSG00000054889	NonProperStrand	4	chr5	108334224	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-10.4241
chr13	97424784	97424814	protein_coding	Hmgcr	exon	ENSMUSG00000021670	ProperStrand	56	chr1	71642266	71642304	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	1	-7.9711
chr14	8321354	8321412	protein_coding	Gm3752	intron	ENSMUSG00000091617	NonProperStrand	1	chr10	23505166	23505256	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-inf
chr11	62418013	62418032	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr9	4733289	4733307	protein_coding	Gria4	intron	ENSMUSG00000025892	ProperStrand	20	1	-11.1961
chr2	90730314	90730330	protein_coding	C1qtnf4	exon	ENSMUSG00000040794	ProperStrand	7	chr9	120039533	120039573	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-7.5792
chr4	75094306	75094322	LINE	Lx9	L1	chr4Lx975094037	ProperStrand	41	chr18	75161533	75161595	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-7.9642
chr11	106362304	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	chr17	35087892	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	7	-2.2846
chr17	88974562	88974578	protein_coding	Klraq1	exon	ENSMUSG00000034709	ProperStrand	6	chr14	76247711	76247749	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-8.8306
chr5	149859436	149859453	protein_coding	Hmgb1	utr3	ENSMUSG00000066551	NonProperStrand	16	chr1	162966813	162966859	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-8.9191
chr7	82463250	82463330	lincRNA	1500012K07Rik	intron	ENSMUSG00000086403	NonProperStrand	2	chr7	82464218	82464308	lincRNA	1500012K07Rik	intron	ENSMUSG00000086403	ProperStrand	1	1	-inf
chr11	23181384	23181403	protein_coding	Xpo1	exon	ENSMUSG00000020290	ProperStrand	123	chr19	8800423	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-4.0322
chr16	31720002	31720092	protein_coding	Dlg1	intron	ENSMUSG00000022770	ProperStrand	69	chr16	23111703	23111783	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.6857
chr1	34265473	34268049	protein_coding	Dst	utr5	ENSMUSG00000026131	ProperStrand	461	chr7	118219575	118219616	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-0.8572
chr4	21606097	21606114	protein_coding	Prdm13	exon	ENSMUSG00000040478	ProperStrand	51	chr1	93342189	93345290	protein_coding	Per2	exon	ENSMUSG00000055866	ProperStrand	114	1	-12.3530
chr11	100182693	100182738	protein_coding	Eif1	utr3	ENSMUSG00000035530	ProperStrand	115	chr1	162966018	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-2.4454
chr8	126932795	126932833	protein_coding	Pgbd5	intron	ENSMUSG00000050751	ProperStrand	20	chr10	110918597	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-5.5586
chr4	132440163	132440211	protein_coding	Stx12	exon	ENSMUSG00000028879	ProperStrand	5	chr3	108228259	108228275	protein_coding	Sars	utr3	ENSMUSG00000068739	NonProperStrand	200	1	-16.0289
chr2	90433697	90433787	LINE	L1_Mur3	L1	chr2L1_Mur390433709	ProperStrand	1	chr5	54007290	54007380	protein_coding	Rbpj	intron	ENSMUSG00000039191	ProperStrand	96	1	-inf
chr7	29605709	29605756	protein_coding	Hnrnpl	exon	ENSMUSG00000015165	ProperStrand	150	chr11	69483136	69483211	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.0613
chr11	50276057	50276137	LTR	ORR1A2	MaLR	chr11ORR1A250275983	ProperStrand	1	chr4	135489019	135489109	protein_coding	Fuca1	intron	ENSMUSG00000028673	NonProperStrand	1	1	-inf
chr19	8798479	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	chr9	15119297	15119426	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	9	-1.9060
chr8	14027872	14027897	protein_coding	Erich1	utr3	ENSMUSG00000051978	ProperStrand	12	chr18	35714146	35714258	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-10.7536
chr1	155287312	155287355	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	chr12	109345603	109345703	protein_coding	Setd3	exon	ENSMUSG00000056770	ProperStrand	21	1	-11.1037
chr15	65089909	65089925	LINE	Lx7	L1	chr15Lx765089731	NonProperStrand	1	chr1	162966189	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-inf
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr10	23506278	23506346	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	2	-3.2760
chr4	107649438	107649454	protein_coding	Slc1a7	intron	ENSMUSG00000008932	ProperStrand	4	chr11	3649570	3649587	protein_coding	Osbp2	intron	ENSMUSG00000020435	ProperStrand	60	1	-19.5074
chrX	34622915	34623005	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	chr17	71990218	71990280	snoRNA	ENSMUSG00000092887_Snord53	.	ENSMUSG00000092887	ProperStrand	53	1	-3.3968
chr12	73165244	73165334	LTR	ORR1A2	MaLR	chr12ORR1A273165263	NonProperStrand	1	chr7	120727975	120728065	LTR	ORR1A0	MaLR	chr7ORR1A0120727904	NonProperStrand	1	1	-inf
chr7	148624327	148624396	protein_coding	Lrdd	utr3	ENSMUSG00000025507	ProperStrand	14	chr7	116663683	116663711	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-5.2435
chrX	148323068	148336105	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	chr3	123210881	123210983	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	5	-0.8919
chr8	97619857	97619907	protein_coding	Katnb1	exon	ENSMUSG00000031787	ProperStrand	8	chr18	33954816	33954906	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-7.4981
chr8	37209562	37209579	protein_coding	D8Ertd82e	exon	ENSMUSG00000050271	NonProperStrand	3	chrX	34622906	34623004	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-9.3485
chr13	47201411	47201431	protein_coding	Dek	intron	ENSMUSG00000021377	NonProperStrand	7	chr18	35714144	35714209	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-7.7147
chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	chrX	84483701	84483738	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-4.2183
chr5	24072430	24073031	protein_coding	Abcf2	exon	ENSMUSG00000028953	ProperStrand	50	chr13	51743663	51743703	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	8	-21.0619
chr2	72168617	72168717	protein_coding	B230120H23Rik	intron	ENSMUSG00000004085	ProperStrand	34	chr7	117190028	117190059	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	3	-10.6185
chr3	156224612	156224628	lincRNA	4930570G19Rik	exon	ENSMUSG00000085084	ProperStrand	326	chr12	17553062	17553091	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-2.0231
chr1	182352403	182352419	protein_coding	Itpkb	utr3	ENSMUSG00000038855	NonProperStrand	27	chr15	34370620	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-5.0720
chr6	87844680	87844755	protein_coding-noncoding	Copg	utr5	ENSMUSG00000030058	ProperStrand	4	chr18	35714258	35714290	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	4	-inf
chr12	92811862	92811904	protein_coding	Gtf2a1	intron	ENSMUSG00000020962	ProperStrand	61	chr5	121655016	121655096	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.7168
chr11	69483136	69483232	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	chr7	88674740	88674848	snoRNA	ENSMUSG00000093107_AC167122.1	.	ENSMUSG00000093107	ProperStrand	110	3	-4.3519
chr7	26443672	26443715	protein_coding	Bckdha	exon	ENSMUSG00000060376	ProperStrand	14	chr18	35714198	35714292	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-6.2700
chr10	93334241	93334259	protein_coding	Metap2	exon	ENSMUSG00000036112	ProperStrand	78	chr18	35716788	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-4.9616
chr11	55313031	55313092	protein_coding	G3bp1	utr3	ENSMUSG00000018583	ProperStrand	106	chr2	4974190	4974207	protein_coding	Optn	exon	ENSMUSG00000026672	ProperStrand	451	1	-8.1359
chr10	74721859	74724572	protein_coding	Specc1l	exon	ENSMUSG00000033444	ProperStrand	36	chr17	24665453	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	4	-18.2752
chr9	15056947	15056988	protein_coding	2200002K05Rik	intron	ENSMUSG00000031937	ProperStrand	22	chr6	125136372	125136416	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	2	-13.4985
chr5	116590097	116590187	protein_coding	Ccdc60	intron	ENSMUSG00000043913	NonProperStrand	4	chr5	116588258	116588348	protein_coding	Ccdc60	intron	ENSMUSG00000043913	ProperStrand	8	1	-19.3161
chr3	137849424	137849440	protein_coding	4930579F01Rik	utr5	ENSMUSG00000012042	NonProperStrand	156	chr4	137075601	137075646	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	1	-6.2096
chr1	181027187	181027205	protein_coding	Smyd3	intron	ENSMUSG00000055067	ProperStrand	231	chr17	24856683	24856754	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-3.8282
chr15	76010297	76010313	protein_coding	Plec	exon	ENSMUSG00000022565	ProperStrand	186	chr2	26768368	26768404	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-3.4503
chr7	27974447	27974537	protein_coding	Snrpa	exon	ENSMUSG00000061479	ProperStrand	56	chr4	131908727	131908807	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.3189
chr12	104317206	104317223	protein_coding	Unc79	exon	ENSMUSG00000021198	ProperStrand	99	chr9	59526557	59526658	protein_coding	Pkm2	utr3	ENSMUSG00000032294	ProperStrand	1296	1	-6.1875
chr17	74989061	74989125	protein_coding	Birc6	exon	ENSMUSG00000024073	ProperStrand	110	chrX	34622907	34622938	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-3.8107
chr1	88252848	88252883	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	chr11	116938556	116938679	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	4	-3.1218
chr9	61761198	61761290	protein_coding	Rplp1	exon	ENSMUSG00000007892	ProperStrand	116	chr17	35088957	35089016	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	2	-7.6118
chrX	34622940	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	chr1	129228421	129228512	snoRNA	ENSMUSG00000093146_AC131793.1	.	ENSMUSG00000093146	ProperStrand	119	26	-21.9067
chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	chrX	71198242	71198317	protein_coding	Hcfc1	exon	ENSMUSG00000031386	ProperStrand	424	1	-5.5709
chr5	29761623	29761703	protein_coding	Nom1	exon	ENSMUSG00000001569	ProperStrand	11	chr1	177544973	177546678	protein_coding	Fh1	exon	ENSMUSG00000026526	ProperStrand	37	1	-17.7495
chr2	154518953	154518970	protein_coding	Chmp4b	intron	ENSMUSG00000038467	ProperStrand	21	chr18	35716705	35716795	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.0576
chr9	78056894	78056942	protein_coding	Gsta4	exon	ENSMUSG00000032348	ProperStrand	82	chr11	97642952	97642987	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.9551
chr7	134165670	134165726	protein_coding	Maz	utr3	ENSMUSG00000030678	ProperStrand	42	chr1	141319671	141319687	protein_coding	Zbtb41	utr5	ENSMUSG00000033964	NonProperStrand	145	1	-12.2615
chr12	55962613	55962663	protein_coding	Cfl2	exon	ENSMUSG00000062929	ProperStrand	4	chr16	23111770	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-12.0512
chr4	130237348	130237381	protein_coding	Pum1	intron	ENSMUSG00000028580	ProperStrand	131	chr7	30074412	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-8.8635
chr9	24241505	24241564	protein_coding	Dpy19l1	intron	ENSMUSG00000043067	ProperStrand	24	chr5	74489564	74489654	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-5.5445
chr6	72275736	72278545	protein_coding	Usp39	exon	ENSMUSG00000056305	ProperStrand	16	chr4	131908356	131908446	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.6705
chr11	97888591	97888608	protein_coding	Rpl19	intron	ENSMUSG00000017404	NonProperStrand	9	chr1	162968213	162968259	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-10.6846
chr13	55390799	55390889	protein_coding	Nsd1	intron	ENSMUSG00000021488	NonProperStrand	4	chr19	7015933	7016023	protein_coding	Gpr137	utr5	ENSMUSG00000024958	NonProperStrand	2	1	-inf
chr6	47731683	47731707	misc_RNA	Y_RNA	.	ENSMUSG00000064945	ProperStrand	93	chr11	69483136	69483194	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.7376
chr11	76412318	76412408	protein_coding	Abr	intron	ENSMUSG00000017631	ProperStrand	33	chr7	116663634	116663714	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.5837
chr7	53854055	53854076	protein_coding	Sergef	intron	ENSMUSG00000030839	ProperStrand	7	chr7	116665207	116665224	protein_coding	Rpl27a	exon	ENSMUSG00000046364	ProperStrand	149	1	-15.9186
chr10	5990471	5990571	protein_coding	Akap12	utr3	ENSMUSG00000038587	ProperStrand	1008	chr11	5180669	5180685	protein_coding	Znrf3	utr3	ENSMUSG00000041961	NonProperStrand	210	1	-5.2094
chr2	71100727	71100814	protein_coding	Dync1i2	exon	ENSMUSG00000027012	ProperStrand	35	chr5	65781684	65781983	protein_coding	Rpl9	exon	ENSMUSG00000047215	ProperStrand	113	1	-13.1352
chr10	126990544	126990763	protein_coding	Lrp1	exon	ENSMUSG00000040249	ProperStrand	151	chr15	79913288	79913346	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-3.5885
chr15	36538491	36538541	protein_coding	Pabpc1	utr5	ENSMUSG00000022283	ProperStrand	908	chr5	73563222	73563238	protein_coding	Fryl	intron	ENSMUSG00000070733	ProperStrand	173	1	-5.7887
chr5	145532203	145532262	protein_coding	Trrap	intron	ENSMUSG00000045482	ProperStrand	399	chr4	116826699	116826766	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-3.1588
chr6	113317091	113320222	protein_coding	Tada3	exon	ENSMUSG00000048930	ProperStrand	13	chr4	131908275	131908355	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.0703
chr12	114391682	114391709	protein_coding	Crip1	exon	ENSMUSG00000006360	ProperStrand	8	chr11	106362332	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-9.9436
chrX	37826869	37826888	processed_transcript	Gm14643	.	ENSMUSG00000086157	ProperStrand	3	chr8	13416896	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-12.7981
chr9	78023109	78023184	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr13	74055968	74055985	protein_coding	Trip13	exon	ENSMUSG00000021569	NonProperStrand	1	1	-inf
chr17	47457119	47457197	protein_coding	Trerf1	intron	ENSMUSG00000064043	ProperStrand	56	chr16	23110530	23110581	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	4	-9.2700
chr14	24251850	24251866	protein_coding	Kcnma1	intron	ENSMUSG00000063142	NonProperStrand	104	chr4	116826700	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-5.6980
chr1	179377850	179377922	protein_coding	Zfp238	exon	ENSMUSG00000063659	ProperStrand	2	chr4	131908704	131908794	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-8.0336
chr14	60441857	60441874	protein_coding	Atp8a2	intron	ENSMUSG00000021983	ProperStrand	14	chr2	167434348	167434396	protein_coding	Gm20431	utr3	ENSMUSG00000089739	ProperStrand	81	1	-15.6926
chr14	108986504	108986521	LTR	MTE-int	MaLR	chr14MTE-int108986408	ProperStrand	32	chr17	45704997	45705188	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	1	-7.9866
chr5	54389949	54389966	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	chr17	72647021	72647040	protein_coding	Alk	intron	ENSMUSG00000055471	ProperStrand	21	1	-12.9087
chr1	90161207	90161271	protein_coding	Hjurp	utr3	ENSMUSG00000044783	ProperStrand	110	chr2	145076804	145209249	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	3	-14.8524
chr1	36563257	36563340	protein_coding	Cnnm4	exon	ENSMUSG00000037408	ProperStrand	12	chr4	131908689	131908717	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.9639
chr6	54379743	54379760	lincRNA	9130019P16Rik	exon	ENSMUSG00000073067	ProperStrand	255	chr1	162966813	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-3.4882
chr1	88247814	88247876	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	chr19	44188459	44188549	snoRNA	ENSMUSG00000077391_SNORA12	.	ENSMUSG00000077391	ProperStrand	506	1	-1.3645
chr19	15983831	15983917	protein_coding	Psat1	exon	ENSMUSG00000024640	ProperStrand	33	chr16	23111375	23111465	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.1725
chr9	21392535	21392613	protein_coding	Carm1	exon	ENSMUSG00000032185	ProperStrand	82	chr18	33954818	33954909	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	6	-16.0679
chr1	18974608	18974624	LTR	LTR84a	ERVL	chr1LTR84a18974334	NonProperStrand	22	chr4	131865381	131865449	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-5.9525
chr2	59683214	59683282	protein_coding	Tanc1	utr3	ENSMUSG00000035168	ProperStrand	80	chr5	144319499	144319520	protein_coding	2810453I06Rik	intron	ENSMUSG00000048910	NonProperStrand	2	1	-inf
chr18	67978450	67978476	protein_coding	Cep192	exon	ENSMUSG00000024542	ProperStrand	59	chrX	55287566	55287624	protein_coding	Zic3	exon	ENSMUSG00000067860	ProperStrand	21	1	-15.4543
chr1	182509365	182509455	protein_coding	Parp1	exon	ENSMUSG00000026496	ProperStrand	227	chr5	130300430	130300548	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	13	-20.1120
chr2	104414669	104414749	SINE	B1F	Alu	chr2B1F104414632	NonProperStrand	1	chr2	104414505	104414595	SINE	B1_Mus2	Alu	chr2B1_Mus2104414526	NonProperStrand	1	1	-inf
chr5	121068629	121068716	protein_coding	Ddx54	exon	ENSMUSG00000029599	ProperStrand	104	chr1	188791856	188791872	protein_coding	D1Pas1	exon	ENSMUSG00000039224	ProperStrand	5	1	-17.4646
chr7	29095918	29095949	protein_coding	Timm50	exon	ENSMUSG00000003438	ProperStrand	6	chr3	85448965	85456213	protein_coding	Pet112l	exon	ENSMUSG00000028085	ProperStrand	81	1	-17.4391
chr14	103930758	104002528	protein_coding	Scel	utr3	ENSMUSG00000022123	ProperStrand	4	chr16	23111704	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-12.0512
chr6	120990505	120990595	protein_coding	Mical3	utr5	ENSMUSG00000003178	ProperStrand	9	chr16	23111750	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.4225
chr6	125094153	125094233	protein_coding	Nop2	exon	ENSMUSG00000038279	ProperStrand	39	chr4	131865914	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	5	-11.6935
chr8	11427556	11427572	protein_coding	Col4a2	exon	ENSMUSG00000031503	ProperStrand	74	chr9	64022852	64022875	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-7.6068
chr1	182745764	182745781	antisense	Gm16067	.	ENSMUSG00000073485	ProperStrand	25	chr4	131865855	131865902	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.2649
chr17	39985170	39985423	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr2	26493366	26493496	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	11	-1.3344
chr13	6580485	6580575	protein_coding	Pfkp	utr3	ENSMUSG00000021196	ProperStrand	197	chr14	76247754	76247834	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-2.0594
mmu-miR-1291	0	25	miRNA	mmu-miR-1291	.	mmu-miR-1291	ProperStrand	103	chr11	97642952	97643086	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	6	-10.7219
chr2	179678664	179678731	protein_coding	Taf4a	intron	ENSMUSG00000039117	ProperStrand	15	chr11	77996576	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-8.8822
chr2	26493426	26493516	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr2	130103751	130103797	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	2	-3.2411
chr7	67123705	67123723	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	chr6	71832550	71832650	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-2.1486
chr16	58673500	58673516	protein_coding	Cpox	exon	ENSMUSG00000022742	NonProperStrand	4	chr5	68121105	68121121	protein_coding	Atp8a1	exon	ENSMUSG00000037685	ProperStrand	20	1	-19.5488
chr4	58083061	58083077	protein_coding	Svep1	exon	ENSMUSG00000028369	ProperStrand	54	chr4	131908363	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-4.5824
chr7	148587947	148588142	protein_coding	Taldo1	exon	ENSMUSG00000025503	ProperStrand	28	chr9	27140945	27140961	protein_coding	Igsf9b	exon	ENSMUSG00000034275	ProperStrand	18	1	-17.1454
chr10	79003327	79003353	protein_coding	Mier2	utr3	ENSMUSG00000042570	ProperStrand	10	chr5	130300518	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-5.9242
chr11	98116593	98116611	protein_coding	Cdk12	intron	ENSMUSG00000003119	ProperStrand	50	chr2	26767599	26767677	protein_coding	Rpl7a	exon	ENSMUSG00000062647	ProperStrand	234	1	-10.9516
chr4	128899900	128899916	protein_coding	C77080	exon	ENSMUSG00000050390	NonProperStrand	28	chr16	23110899	23110989	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.1386
chr3	156224612	156224628	lincRNA	4930570G19Rik	exon	ENSMUSG00000085084	ProperStrand	326	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	4	-3.6203
chr9	120163167	120163186	LTR	MTD	MaLR	chr9MTD120163025	NonProperStrand	1	chr11	68886975	68887036	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-inf
chr12	99756958	99756975	protein_coding	Kcnk10	exon	ENSMUSG00000033854	NonProperStrand	37	chr13	44997948	44998041	protein_coding	Jarid2	exon	ENSMUSG00000038518	ProperStrand	372	1	-10.6328
chr2	31529797	31529818	protein_coding	Exosc2	intron	ENSMUSG00000039356	ProperStrand	39	chr3	68889053	68889143	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-4.0569
chr2	179908658	179908715	protein_coding	Adrm1	exon	ENSMUSG00000039041	ProperStrand	27	chr13	53073980	53073997	protein_coding	Nfil3	intron	ENSMUSG00000056749	NonProperStrand	66	1	-14.7430
chr1	158697575	158697591	LTR	ORR1A4	MaLR	chr1ORR1A4158697469	NonProperStrand	9	chr3	41367461	41367480	protein_coding	Phf17	utr5	ENSMUSG00000025764	ProperStrand	101	1	-16.1234
chr10	39544104	39544144	protein_coding	Rev3l	exon	ENSMUSG00000019841	ProperStrand	39	chr15	79913288	79913341	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-7.3555
chr10	80643104	80643124	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr17	24300045	24300061	protein_coding	Amdhd2	exon	ENSMUSG00000036820	ProperStrand	11	1	-9.5329
chr4	80362159	80362177	LINE	Lx3C	L1	chr4Lx3C80361384	ProperStrand	4	chr16	23111447	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-6.3168
chr19	10701175	10701638	protein_coding	Ddb1	exon	ENSMUSG00000024740	ProperStrand	304	chr9	110797846	110798281	protein_coding	Als2cl	exon	ENSMUSG00000044037	ProperStrand	10	1	-13.7282
chr17	32261232	32261287	protein_coding	Notch3	exon	ENSMUSG00000038146	ProperStrand	181	chr6	121423179	121423195	protein_coding	Iqsec3	utr5	ENSMUSG00000040797	NonProperStrand	139	1	-9.4132
chr12	88607782	88609105	protein_coding	Ahsa1	utr5	ENSMUSG00000021037	ProperStrand	58	chr1	89673606	89673686	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-3.3250
chr9	63994647	63994713	protein_coding	Zwilch	exon	ENSMUSG00000032400	ProperStrand	29	chr5	121655057	121655147	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-8.4864
chr16	91729698	91729723	protein_coding	Itsn1	utr5	ENSMUSG00000022957	ProperStrand	172	chr18	33954874	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-3.1440
chr6	30102946	30103046	protein_coding	Nrf1	utr3	ENSMUSG00000058440	ProperStrand	22	chr12	112779225	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-6.7549
chr15	58616393	58616411	protein_coding	Tmem65	utr3	ENSMUSG00000062373	ProperStrand	7	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-12.9875
chr16	17642651	17642741	protein_coding	Smpd4	exon	ENSMUSG00000005899	ProperStrand	33	chr5	130295414	130295494	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-6.4262
chr5	135858262	135858292	protein_coding	Pom121	exon	ENSMUSG00000053293	ProperStrand	127	chr10	80641705	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	3	-13.9187
chr3	35203140	35203230	LINE	Lx7	L1	chr3Lx735202713	NonProperStrand	1	chr18	32564286	32564366	protein_coding	Bin1	intron	ENSMUSG00000024381	NonProperStrand	1	1	-inf
chr6	29324435	29324535	protein_coding	Calu	utr3	ENSMUSG00000029767	ProperStrand	47	chr1	162967513	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-3.9287
chr3	14137605	14137624	protein_coding	Ralyl	intron	ENSMUSG00000039717	ProperStrand	2	chr6	71832605	71832687	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-13.0331
chr4	116862547	116862668	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	chr2	37255594	37255620	snoRNA	ENSMUSG00000077756_Snord90	.	ENSMUSG00000077756	ProperStrand	167	7	-22.3901
chr11	48617726	48617787	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	chr12	17552998	17553087	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	3	-5.3113
chr9	78328074	78328174	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr8	109408022	109408085	protein_coding	Chtf8	utr3	ENSMUSG00000046691	ProperStrand	33	2	-12.0783
chr11	68067261	68067277	protein_coding	Ntn1	intron	ENSMUSG00000020902	NonProperStrand	194	chr11	62416600	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-2.9707
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr13	100761210	100761226	protein_coding	Mccc2	exon	ENSMUSG00000021646	ProperStrand	29	1	-9.2575
chr12	63334213	63334230	LTR	RLTR9E	ERVK	chr12RLTR9E63333890	NonProperStrand	15	chr9	120039533	120039605	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-5.9962
chr4	84174026	84174076	protein_coding	Bnc2	intron	ENSMUSG00000028487	ProperStrand	76	chr19	8963027	8963063	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.8903
chr11	6319582	6319615	protein_coding	Ppia	utr3	ENSMUSG00000071866	ProperStrand	127	chr16	23111794	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-0.8573
chr3	121154866	121154903	protein_coding	Cnn3	exon	ENSMUSG00000053931	ProperStrand	77	chr16	23110530	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.0467
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr8	3614249	3614265	protein_coding	Xab2	exon	ENSMUSG00000019470	ProperStrand	52	1	-6.1857
chr8	94022943	94022985	protein_coding	Fto	intron	ENSMUSG00000055932	ProperStrand	34	chr9	15119631	15119721	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	4	-12.2134
chrX	7649555	7649594	protein_coding	Suv39h1	exon	ENSMUSG00000039231	ProperStrand	24	chr2	144087325	144087425	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-8.3819
chr4	116366450	116371821	protein_coding	Prdx1	exon	ENSMUSG00000028691	ProperStrand	41	chr1	162965996	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	3	-10.4387
chr18	35404372	35410643	protein_coding	Ctnna1	exon	ENSMUSG00000037815	ProperStrand	115	chr9	15118324	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-4.1187
chr2	172825855	172825871	protein_coding	Rae1	utr5	ENSMUSG00000027509	NonProperStrand	44	chr5	130300437	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	4	-10.5806
chr5	125502278	125502327	protein_coding	Ncor2	intron	ENSMUSG00000029478	ProperStrand	377	chr6	87138823	87154416	protein_coding	Antxr1	exon	ENSMUSG00000033420	ProperStrand	70	1	-9.3224
chr6	48581680	48581696	lincRNA	AI854703	exon	ENSMUSG00000053297	ProperStrand	11	chr12	106269465	106269558	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-7.5084
chr8	72334599	72334615	protein_coding	Gmip	exon	ENSMUSG00000036246	ProperStrand	102	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-6.6853
chr17	45814943	45816197	protein_coding	Tmem63b	exon	ENSMUSG00000036026	ProperStrand	93	chr2	120872244	120872260	protein_coding	Tgm5	exon	ENSMUSG00000053675	NonProperStrand	163	1	-10.4272
chr2	28700590	28700783	protein_coding	Ddx31	exon	ENSMUSG00000026806	ProperStrand	8	chr18	35716782	35716862	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-5.9895
chr4	68423441	68423457	protein_coding	Dbc1	exon	ENSMUSG00000028351	ProperStrand	78	chr11	97642952	97643072	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.0354
chr4	68423441	68423457	protein_coding	Dbc1	exon	ENSMUSG00000028351	ProperStrand	78	chr3	123210878	123210980	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-3.0638
chr2	93542736	93542754	protein_coding	Ext2	intron	ENSMUSG00000027198	NonProperStrand	21	chr2	26494782	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.0955
chr19	8702139	8702155	protein_coding	Slc22a6	utr3	ENSMUSG00000024650	NonProperStrand	1	chr3	153574604	153574656	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	1	-inf
chr17	4082124	4082154	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr9	44689280	44689302	protein_coding	Mll1	exon	ENSMUSG00000002028	NonProperStrand	26	1	-11.6563
chr8	127256186	127256240	protein_coding	Arv1	intron	ENSMUSG00000031982	ProperStrand	13	chr11	62418014	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	5	-inf
chr4	21874828	21874908	protein_coding	6230409E13Rik	intron	ENSMUSG00000028246	ProperStrand	3	chr4	82617804	82617894	protein_coding	Frem1	intron	ENSMUSG00000059049	NonProperStrand	14	1	-inf
chr4	140864358	140864755	protein_coding	Epha2	exon	ENSMUSG00000006445	ProperStrand	148	chr4	131908689	131908868	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-1.2814
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr10	80641694	80641726	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	1	-2.4812
chr8	71632206	71633788	protein_coding	Atp6v1b2	exon	ENSMUSG00000006273	ProperStrand	29	chr16	23111393	23111473	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.3903
chrX	98790674	98790714	protein_coding	Taf1	exon	ENSMUSG00000031314	ProperStrand	61	chr1	88247737	88247804	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-5.0648
chr4	154272607	154272647	protein_coding	2810405K02Rik	exon	ENSMUSG00000029059	ProperStrand	1	chr7	116663716	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-inf
chr14	19101530	19101630	protein_coding	Rpl15	exon	ENSMUSG00000012405	ProperStrand	145	chr14	78910575	78910600	protein_coding	Akap11	exon	ENSMUSG00000022016	ProperStrand	44	1	-12.1681
chr13	80174936	80175016	LINE	Lx9	L1	chr13Lx980174942	NonProperStrand	1	chr13	80174603	80174693	LTR	RMER20B	ERVK	chr13RMER20B80174305	NonProperStrand	1	1	-inf
chr16	38396504	38396557	protein_coding	Pla1a	utr3	ENSMUSG00000002847	ProperStrand	32	chr1	9932550	9932595	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-8.9922
chr9	22136375	22136475	protein_coding	Anln	utr3	ENSMUSG00000036777	ProperStrand	133	chr18	35716817	35716883	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	14	-20.3749
chr3	46250662	46250678	protein_coding	Pabpc4l	exon	ENSMUSG00000090919	ProperStrand	137	chr4	116827128	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-5.4159
chr18	75161140	75161172	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	chr2	32818815	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	3	-4.6510
chr5	23091225	23091258	protein_coding	Srpk2	intron	ENSMUSG00000062604	ProperStrand	51	chr2	144087414	144087452	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-6.8681
chr1	88248838	88248868	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chr4	138867205	138867223	protein_coding	Akr7a5	intron	ENSMUSG00000028743	ProperStrand	22	1	-9.3781
chr7	109160404	109160484	protein_coding	Numa1	exon	ENSMUSG00000066306	ProperStrand	148	chr18	35716789	35716879	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-0.8718
chr10	5989287	5989339	protein_coding	Akap12	utr3	ENSMUSG00000038587	ProperStrand	1008	chr8	98269959	98270059	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-0.7821
chr9	108868492	108868514	protein_coding	Col7a1	exon	ENSMUSG00000025650	ProperStrand	33	chr2	160785955	160786055	protein_coding	Chd6	exon	ENSMUSG00000057133	ProperStrand	104	10	-21.3252
chr19	47694637	47694737	protein_coding	Slk	exon	ENSMUSG00000025060	ProperStrand	27	chr16	23110538	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.9061
chr16	74119320	74119337	protein_coding	Robo2	intron	ENSMUSG00000052516	NonProperStrand	28	chr5	74489543	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-5.2403
chr13	23556126	23556144	protein_coding	Btn1a1	exon	ENSMUSG00000000706	ProperStrand	1	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-inf
chr18	34968533	34988680	protein_coding	Kdm3b	exon	ENSMUSG00000038773	ProperStrand	80	chr17	24857718	24857819	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	4	-7.1527
chr9	57376869	57378074	protein_coding	Cox5a	exon	ENSMUSG00000000088	ProperStrand	26	chr7	29136526	29136616	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-6.5617
chr2	25563070	25563086	antisense	A230005M16Rik	.	ENSMUSG00000087612	ProperStrand	103	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-7.8467
chr15	10504979	10504995	protein_coding	Rai14	exon	ENSMUSG00000022246	ProperStrand	180	chr3	96132454	96132514	snRNA	ENSMUSG00000075978_U1	.	ENSMUSG00000075978	ProperStrand	132	1	-9.5276
chr4	19448721	19448748	protein_coding	Cpne3	utr3	ENSMUSG00000028228	ProperStrand	7	chr11	6428034	6428119	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-7.4403
chr17	24856681	24856835	antisense	Snhg9	.	ENSMUSG00000090101	ProperStrand	218	chr17	24856613	24856746	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	119	-inf
chr15	55089356	55089433	protein_coding	Deptor	utr3	ENSMUSG00000022419	ProperStrand	17	chr7	52382583	52382904	protein_coding	Rpl13a	exon	ENSMUSG00000074129	ProperStrand	269	1	-12.8666
chr2	90235293	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	19094649	19094669	protein_coding	Tfap2d	exon	ENSMUSG00000042596	ProperStrand	3	2	-17.9085
chr11	102294590	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr3	88497910	88497982	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-3.2124
chr16	84972883	84972899	protein_coding	App	intron	ENSMUSG00000022892	NonProperStrand	101	chr5	121655017	121655095	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.8040
chr3	102020851	102020941	SINE	B2_Mm2	B2	chr3B2_Mm2102020756	ProperStrand	1	chr3	102021034	102021124	SINE	ID_B1	B4	chr3ID_B1102021016	NonProperStrand	1	1	-inf
chr2	75706403	75706454	protein_coding	Agps	exon	ENSMUSG00000042410	ProperStrand	22	chr16	23111777	23111836	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-6.2517
chr9	95889330	95889418	protein_coding	Xrn1	exon	ENSMUSG00000032410	ProperStrand	12	chr16	23111374	23111464	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.0123
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr13	64465386	64465476	protein_coding	Ctsl	utr3	ENSMUSG00000021477	ProperStrand	44	1	-8.4165
chr5	145901252	145901269	protein_coding	Bud31	utr5	ENSMUSG00000038722	NonProperStrand	6	chr2	158185597	158185666	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	2	-17.7757
chr3	93630080	93630096	protein_coding	Tdpoz3	exon	ENSMUSG00000058005	ProperStrand	2	chr4	131908271	131908357	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-8.3123
chr10	60692417	60692433	protein_coding	Adamts14	exon	ENSMUSG00000059901	NonProperStrand	127	chr19	8963045	8963084	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.1421
chr17	45705242	45705298	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr7	52381719	52381759	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	2	-2.8059
chr4	151413896	151415224	protein_coding	Nol9	exon	ENSMUSG00000028948	ProperStrand	93	chr2	32818853	32818875	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-4.6228
chr4	151730301	151730737	protein_coding	Chd5	exon	ENSMUSG00000005045	NonProperStrand	147	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.2901
chr3	100726559	100726577	protein_coding	Trim45	utr5	ENSMUSG00000033233	ProperStrand	59	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-7.2365
chr7	107115328	107115348	protein_coding	Rnf169	intron	ENSMUSG00000058761	ProperStrand	31	chr5	121655055	121655145	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.0092
chr12	34172145	34172235	LINE	L1MC2	L1	chr12L1MC234171883	ProperStrand	1	chr12	34172590	34172670	LINE	L1VL4	L1	chr12L1VL434172529	NonProperStrand	1	1	-inf
chr11	83230788	83230810	protein_coding	Rasl10b	intron	ENSMUSG00000020684	ProperStrand	6	chr14	76247754	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-8.8306
chr11	106681958	106681975	protein_coding	Smurf2	utr3	ENSMUSG00000018363	ProperStrand	79	chr11	97642952	97642992	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.0149
chr8	42053459	42053539	protein_coding	Pdgfrl	intron	ENSMUSG00000031595	NonProperStrand	4	chr8	42085987	42086077	protein_coding	Mtus1	intron	ENSMUSG00000045636	ProperStrand	12	1	-21.0614
chr1	188562659	188562759	protein_coding-noncoding	Rrp15	utr3	ENSMUSG00000001305	ProperStrand	3	chr8	73419657	73419733	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-9.3031
chr11	76336853	76336871	protein_coding	Abr	intron	ENSMUSG00000017631	ProperStrand	33	chr4	121870889	122132511	pseudogene	Gm12896	.	ENSMUSG00000083558	NonProperStrand	19	1	-16.7928
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr14	33808467	33808483	protein_coding	Lrrc18	utr5	ENSMUSG00000041673	ProperStrand	5	1	-13.7539
chr5	33711527	33711617	protein_coding	Maea	intron	ENSMUSG00000079562	ProperStrand	32	chr8	32260351	32260431	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-5.8566
chr16	18513364	18513464	protein_coding	Gnb1l	intron	ENSMUSG00000000884	ProperStrand	25	chr11	116533823	116533893	snoRNA	ENSMUSG00000065640_Snord1c	.	ENSMUSG00000065640	ProperStrand	373	7	-19.9050
chr2	119550626	119552482	protein_coding	Rtf1	exon	ENSMUSG00000027304	ProperStrand	12	chr4	151433407	151433423	protein_coding	Nol9	utr3	ENSMUSG00000028948	ProperStrand	93	1	-15.7126
chr11	62416602	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	chr2	166888977	166888998	snoRNA	ENSMUSG00000077515_SNORD12	.	ENSMUSG00000077515	ProperStrand	191	1	-2.9983
chr4	43505806	43505896	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr9	37300434	37300512	protein_coding	BC024479	intron	ENSMUSG00000042138	ProperStrand	17	1	-5.4753
chr1	134014277	134014361	protein_coding	Cdk18	intron	ENSMUSG00000026437	ProperStrand	51	chr2	130103808	130103824	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-8.7975
chr7	119586929	119586946	protein_coding	Parva	intron	ENSMUSG00000030770	ProperStrand	3	chr4	131908753	131908808	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-6.9471
chr19	23332134	23334221	protein_coding	Smc5	exon	ENSMUSG00000024943	ProperStrand	146	chr8	129468763	129468843	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-2.7798
chr15	75584985	75585085	protein_coding	Zc3h3	utr3	ENSMUSG00000075600	ProperStrand	14	chr6	71832550	71832579	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-8.5338
chr7	104830212	104830250	protein_coding	Rsf1	exon	ENSMUSG00000035623	ProperStrand	48	chr9	119255011	119255047	protein_coding	Acaa1a	intron	ENSMUSG00000036138	ProperStrand	15	3	-20.0297
chr11	120814114	120814182	protein_coding	Slc16a3	intron	ENSMUSG00000025161	ProperStrand	98	chr10	39978353	39978443	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-4.5118
chr11	6428076	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr11	62590598	62590630	snoRNA	ENSMUSG00000064692_SNORA67	.	ENSMUSG00000064692	ProperStrand	185	3	-4.0244
chr2	158182180	158182270	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	chr13	90238639	90238719	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	1	-1.0320
chr4	122968618	122968718	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	chr1	161270497	161270554	snoRNA	ENSMUSG00000089536_Scarna3a	.	ENSMUSG00000089536	ProperStrand	247	1	-3.5670
chr2	26493426	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr14	31827478	31827501	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	2	-1.5295
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	27110157	27110173	protein_coding	Zbtb9	utr5	ENSMUSG00000079605	ProperStrand	16	1	-7.0757
chr7	149170854	149171340	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	chr2	144087323	144087443	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	13	-20.2728
chr17	24316907	24316925	protein_coding	Tbc1d24	utr3	ENSMUSG00000036473	ProperStrand	5	chr2	26493456	26493500	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-8.7753
chr10	107800719	107800799	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	chr10	39978438	39978485	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	2	-1.9132
chr2	16278620	16278638	protein_coding	Plxdc2	utr5	ENSMUSG00000026748	NonProperStrand	44	chr4	116826700	116826766	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-7.3993
chr4	116311747	116314503	protein_coding	Akr1a1	exon	ENSMUSG00000028692	ProperStrand	35	chr3	123210854	123210980	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	4	-10.4583
chr13	68759738	68764669	protein_coding	Adcy2	exon	ENSMUSG00000021536	ProperStrand	237	chr8	9988035	9988107	protein_coding	Abhd13	exon	ENSMUSG00000040396	ProperStrand	7	1	-14.9852
chr11	20124755	20124856	protein_coding	Rab1	utr3	ENSMUSG00000020149	ProperStrand	32	chr17	35087895	35087946	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-6.4384
chr11	33052607	33061602	protein_coding	Npm1	exon	ENSMUSG00000057113	ProperStrand	352	chr4	131865853	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	9	-4.2983
chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	chr17	39985543	39985560	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-2.1303
chr14	20963939	20963991	protein_coding	Kcnk5	exon	ENSMUSG00000023243	ProperStrand	29	chr14	25309978	25311023	protein_coding	Rps24	exon	ENSMUSG00000025290	ProperStrand	110	5	-inf
chr19	17407695	17407739	protein_coding	Gcnt1	utr5	ENSMUSG00000038843	ProperStrand	11	chr10	23505165	23505222	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.1476
chr6	52111825	52111897	antisense	Gm15051	.	ENSMUSG00000087658	ProperStrand	1	chr5	134790403	134790422	protein_coding	Gtf2i	utr5	ENSMUSG00000060261	ProperStrand	41	1	-inf
chr11	78085250	78085309	protein_coding	2610507B11Rik	exon	ENSMUSG00000010277	ProperStrand	246	chr2	158185527	158185622	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	3	-9.2218
chr8	107794917	107794933	protein_coding	Hsf4	exon	ENSMUSG00000033249	ProperStrand	11	chr10	23505150	23505237	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-10.3969
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chrX	7182489	7182506	protein_coding	Ccdc22	utr5	ENSMUSG00000031143	NonProperStrand	51	1	-8.1203
chr3	66790039	66790055	protein_coding	Rsrc1	utr5	ENSMUSG00000034544	NonProperStrand	71	chr9	120038466	120038526	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.7411
chr17	88386000	88386100	protein_coding	Msh6	exon	ENSMUSG00000005370	ProperStrand	150	chr1	88252837	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-4.8495
chr4	41673405	41673421	protein_coding	Il11ra1	intron	ENSMUSG00000073889	ProperStrand	128	chr16	23110524	23110557	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.2814
chr11	102294589	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr9	78328194	78328376	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	2	-3.9602
chrX	99380940	99381739	protein_coding	Rps4x	exon	ENSMUSG00000031320	ProperStrand	139	chr11	69481355	69481445	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-3.2571
chr3	60433452	60433542	protein_coding	Mbnl1	utr3	ENSMUSG00000027763	ProperStrand	9	chr3	108357277	108357357	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-8.3481
chr5	60273056	60273146	LINE	L1Md_F3	L1	chr5L1Md_F360272958	NonProperStrand	1	chr5	60272641	60272731	LINE	Lx3_Mus	L1	chr5Lx3_Mus60272483	ProperStrand	1	1	-inf
chr9	64022864	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	chr1	89681352	89681395	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-0.9264
chrX	148471947	148471983	protein_coding	Smc1a	exon	ENSMUSG00000041133	ProperStrand	104	chr16	23111759	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-2.1557
chr18	76297633	76297649	protein_coding	Zbtb7c	exon	ENSMUSG00000044646	ProperStrand	64	chr12	85350481	85350499	protein_coding	Acot1	utr5	ENSMUSG00000072949	ProperStrand	72	1	-12.8178
chr17	45706430	45706500	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr9	106761308	106761326	protein_coding	Manf	intron	ENSMUSG00000032575	ProperStrand	63	1	-6.6333
chr2	3336354	3336371	protein_coding	Meig1	utr5	ENSMUSG00000026650	ProperStrand	18	chr14	21513799	21513829	protein_coding	Sec24c	utr3	ENSMUSG00000039367	ProperStrand	60	1	-15.7554
chr7	50784355	50784372	protein_coding	Cd33	exon	ENSMUSG00000004609	ProperStrand	23	chr10	110918634	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-5.2814
chrX	76972642	76972661	LINE	Lx5	L1	chrXLx576972306	NonProperStrand	1	chr3	123210914	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-inf
chr3	95961567	95961584	protein_coding	Otud7b	utr3	ENSMUSG00000038495	NonProperStrand	4	chr12	88778746	88778767	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-12.1495
chr7	133941249	133942617	protein_coding	Aldoa	utr5	ENSMUSG00000030695	ProperStrand	721	chr10	80641558	80641623	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-1.5988
chr17	35973139	35973573	protein_coding	Tubb5	exon	ENSMUSG00000001525	ProperStrand	624	chr1	34247370	34247460	protein_coding	Dst	utr5	ENSMUSG00000026131	ProperStrand	461	15	-19.4151
chrX	71517852	71517952	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	chr19	8800085	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-1.3931
chr7	80625091	80625125	protein_coding	Chd2	intron	ENSMUSG00000078671	ProperStrand	69	chr4	131908816	131908890	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.0398
chr2	90235302	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	ProperStrand	24	chr7	116663633	116663733	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	NonProperStrand	51	1	-15.5074
chr13	110693373	110693391	protein_coding	Pde4d	utr5	ENSMUSG00000021699	NonProperStrand	36	chr12	82317769	82317785	protein_coding	Slc8a3	exon	ENSMUSG00000079055	ProperStrand	126	1	-12.8557
chr1	38076169	38076269	protein_coding	Eif5b	exon	ENSMUSG00000026083	ProperStrand	118	chr1	162965556	162965598	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.1050
chr14	51427119	51427391	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr3	88497915	88497980	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	2	-3.2549
chr6	31170504	31194107	lincRNA	2210408F21Rik	exon	ENSMUSG00000087380	NonProperStrand	4	chr10	23505152	23505237	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-6.2798
chr2	70927899	70927917	protein_coding	Dcaf17	exon	ENSMUSG00000041966	NonProperStrand	89	chr10	110918558	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-2.7417
chr11	98019157	98019247	protein_coding	Med1	exon	ENSMUSG00000018160	ProperStrand	23	chr2	26494720	26494800	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.9167
chr16	23110455	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	chr15	98356818	98356913	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	8	-0.9524
chr4	15076574	15076591	protein_coding	Necab1	intron	ENSMUSG00000040536	ProperStrand	4	chr5	151755616	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-13.4061
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr3	89750435	89750451	protein_coding	Atp8b2	exon	ENSMUSG00000060671	ProperStrand	140	1	-7.6769
chr13	29042739	29042843	protein_coding	Sox4	utr3	ENSMUSG00000076431	ProperStrand	73	chr16	23111399	23111447	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-4.6746
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	3	-2.1661
mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr11	51371953	51373511	protein_coding	Col23a1	exon	ENSMUSG00000063564	ProperStrand	16	1	-8.5577
chr8	87525135	87525238	protein_coding	Hook2	exon	ENSMUSG00000052566	ProperStrand	204	chr9	120039533	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-2.4942
chr13	9833562	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr3	98118212	98118314	protein_coding	Phgdh	exon	ENSMUSG00000053398	ProperStrand	46	1	-5.4718
chr15	103026360	103026438	protein_coding	Cbx5	utr3	ENSMUSG00000009575	ProperStrand	98	chr1	162965570	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.4133
chr15	88650388	88650979	protein_coding	Creld2	exon	ENSMUSG00000023272	ProperStrand	8	chr15	34370602	34370676	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-7.5453
chr17	35149307	35149496	protein_coding	Vars	exon	ENSMUSG00000007029	ProperStrand	121	chr14	52801229	52801281	protein_coding	Supt16h	exon	ENSMUSG00000035726	ProperStrand	193	1	-9.5623
chr10	86158233	86158419	protein_coding	Hsp90b1	exon	ENSMUSG00000020048	ProperStrand	396	chr4	131866181	131866271	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-0.7235
chr13	83826055	83826135	LINE	L1Md_F2	L1	chr13L1Md_F283825908	NonProperStrand	1	chr13	83825818	83825908	LTR	RMER17D2	ERVK	chr13RMER17D283825726	NonProperStrand	1	1	-inf
chr7	30660015	30660031	protein_coding	Zfp420	exon	ENSMUSG00000058402	ProperStrand	11	chr16	23111452	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.1830
chr17	23955820	23955839	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	chr11	35853255	35853271	protein_coding	Odz2	exon	ENSMUSG00000049336	ProperStrand	106	1	-10.3313
chr10	127931440	127931457	protein_coding	Myl6b	utr3	ENSMUSG00000039824	NonProperStrand	4	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.0048
chr5	136385882	136385936	protein_coding	Ywhag	utr3	ENSMUSG00000051391	ProperStrand	142	chr10	107800730	107800820	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	3	-14.5266
chr5	109124122	109132306	protein_coding	Fgfrl1	exon	ENSMUSG00000008090	ProperStrand	111	chr11	97642952	97643078	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.4919
chr2	132133999	132134037	protein_coding	Cds2	utr3	ENSMUSG00000058793	ProperStrand	47	chr16	23111470	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.6112
chr4	122968617	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	chr13	51743571	51743662	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	4	-3.7514
chr5	119205552	119205652	protein_coding	Med13l	exon	ENSMUSG00000018076	ProperStrand	226	chr1	162965548	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.1404
chr7	150778371	150778461	protein_coding	Cars	exon	ENSMUSG00000010755	ProperStrand	62	chr11	69483200	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.3941
chr5	42136455	42136473	Low_complexity	GA-rich	Low_complexity	chr5GA-rich42136449	NonProperStrand	106	chrX	148275346	148275419	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	1	-7.9272
chr2	93044455	93044471	protein_coding	Tspan18	utr3	ENSMUSG00000027217	NonProperStrand	14	chr16	23111372	23111418	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.7143
chr3	88451180	88451280	protein_coding	Arhgef2	utr3	ENSMUSG00000028059	ProperStrand	13	chr10	23505149	23505201	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.8218
chr8	89158729	89158794	protein_coding	Lonp2	exon	ENSMUSG00000047866	ProperStrand	13	chr15	34370545	34370633	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-6.5354
chr19	5798905	5798959	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr7	25455606	25455623	protein_coding	Tex101	exon	ENSMUSG00000062773	NonProperStrand	3	1	-13.9097
chr16	37384897	37384913	protein_coding	Stxbp5l	utr5	ENSMUSG00000022829	ProperStrand	332	chr7	3597096	3597150	protein_coding	Cnot3	utr5	ENSMUSG00000035632	ProperStrand	55	1	-10.0604
chr11	70220262	70220321	protein_coding	Pelp1	intron	ENSMUSG00000018921	ProperStrand	64	chr3	123210891	123210981	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.9622
chr3	88117244	88117479	protein_coding	Cct3	exon	ENSMUSG00000001416	ProperStrand	82	chr9	25059948	25059964	protein_coding	Sept7	intron	ENSMUSG00000001833	ProperStrand	101	2	-18.2465
chr17	24837876	24838715	protein_coding	Tbl3	exon	ENSMUSG00000040688	ProperStrand	42	chr5	121655017	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-7.3798
chr4	137101451	137101531	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	chr6	115757992	115758082	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-0.9946
chr1	87983881	87983971	snoRNA	ENSMUSG00000077274_SNORA26	.	ENSMUSG00000077274	ProperStrand	361	chr11	69483194	69483278	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	12	-11.3641
chr11	62416949	62416992	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	chr11	106362557	106362605	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-0.9216
chr12	81032317	81037174	SINE	B1_Mus2	Alu	chr12B1_Mus281032289	NonProperStrand	1	chr5	134713781	134713866	protein_coding	Gtf2i	utr3	ENSMUSG00000060261	ProperStrand	41	1	-inf
chr18	75979994	75980012	protein_coding	Zbtb7c	utr5	ENSMUSG00000044646	ProperStrand	64	chr5	130300490	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.3995
chr5	136451719	136451736	SINE	B3A	B2	chr5B3A136451702	NonProperStrand	23	chr8	12757419	12757437	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-10.5302
chr3	121157902	121157928	protein_coding	Cnn3	exon	ENSMUSG00000053931	ProperStrand	77	chr1	162967490	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	6	-16.3770
chr10	75882993	75883083	protein_coding	Pcnt	exon	ENSMUSG00000001151	ProperStrand	127	chr17	35299541	35299621	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-3.3687
chr6	83111671	83111687	protein_coding	1700003E16Rik	exon	ENSMUSG00000030030	ProperStrand	352	chr6	113419922	113419940	protein_coding	Il17re	exon	ENSMUSG00000043088	NonProperStrand	12	1	-13.0518
chr4	133249690	133249720	protein_coding	Arid1a	exon	ENSMUSG00000007880	ProperStrand	465	chr3	123210884	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	5	-1.0650
chr11	58767849	58767939	pseudogene	Hist3h2bb-ps	.	ENSMUSG00000080712	ProperStrand	1	chr8	98269979	98270059	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-inf
chr5	103275232	103275249	protein_coding	Arhgap24	intron	ENSMUSG00000057315	ProperStrand	8	chr11	106362642	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-11.5300
chr9	22136780	22136811	protein_coding	Anln	utr3	ENSMUSG00000036777	ProperStrand	133	chr12	112779247	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-3.2837
chr11	68649814	68653455	protein_coding	Ndel1	exon	ENSMUSG00000018736	ProperStrand	30	chr11	77996558	77996607	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	6	-inf
chr15	77597977	77597993	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr17	39985458	39985499	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-1.8265
chr7	26057527	26057544	protein_coding	Cic	exon	ENSMUSG00000005442	ProperStrand	80	chr5	121655016	121655134	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	3	-8.1158
chr19	41659155	41659255	protein_coding	Gm340	exon	ENSMUSG00000090673	ProperStrand	19	chr10	23505151	23505215	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.1073
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr1	162968262	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-1.6929
chr14	19101590	19101665	protein_coding	Rpl15	exon	ENSMUSG00000012405	ProperStrand	145	chr10	79223624	79223806	protein_coding	Rnf126	exon	ENSMUSG00000035890	ProperStrand	30	1	-12.9460
chr13	62944660	62944677	protein_coding	Fbp2	intron	ENSMUSG00000021456	ProperStrand	100	chr6	52589227	52589265	snoRNA	ENSMUSG00000064792_SNORA32	.	ENSMUSG00000064792	ProperStrand	151	1	-10.4349
chrX	147429554	147429584	protein_coding	Gnl3l	exon	ENSMUSG00000025266	ProperStrand	52	chrX	34622906	34623033	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-3.4318
chr7	72459877	72462954	protein_coding	Tjp1	exon	ENSMUSG00000030516	ProperStrand	78	chr7	29136602	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.9343
chr11	98878370	98878454	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	chr2	158182156	158182291	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	5	-1.4429
chr6	101485357	101485378	LTR	MTEa	MaLR	chr6MTEa101485361	ProperStrand	45	chr4	131865866	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.2312
chr2	157614738	157614838	protein_coding	Ctnnbl1	exon	ENSMUSG00000027649	ProperStrand	26	chr16	23110962	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.2392
chr16	23111389	23111479	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	NonProperStrand	38	chr3	123210855	123210935	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	NonProperStrand	45	1	-14.8270
chr3	89930456	89930533	snoRNA	ENSMUSG00000064930_SNORA41	.	ENSMUSG00000064930	ProperStrand	7	chr4	131908265	131908355	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-5.3201
chr8	127992075	127992165	protein_coding	Sipa1l2	exon	ENSMUSG00000001995	ProperStrand	37	chr16	23111694	23111774	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.7135
chr10	75102134	75102185	protein_coding	Susd2	exon	ENSMUSG00000006342	ProperStrand	16	chr4	131865415	131865458	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	2	-10.7297
chr7	13511113	13511147	protein_coding	Rps5	exon	ENSMUSG00000012848	ProperStrand	108	chr4	131866241	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-2.6101
chr7	104686486	104686504	protein_coding	Ints4	exon	ENSMUSG00000025133	ProperStrand	19	chr16	23110891	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7016
chr13	62619266	62619376	protein_coding	Zfp934	exon	ENSMUSG00000074865	ProperStrand	1	chr2	158185530	158185610	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-inf
chr10	79191822	79193647	protein_coding	Hcn2	exon	ENSMUSG00000020331	ProperStrand	17	chr1	63225583	63225663	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-9.2096
chr9	103401280	103401296	protein_coding	Tmem108	exon	ENSMUSG00000042757	NonProperStrand	323	chr7	117189863	117189943	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-3.0164
chr3	121154415	121154807	protein_coding	Cnn3	exon	ENSMUSG00000053931	ProperStrand	77	chr17	24665419	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-4.4615
chr14	124026090	124026107	protein_coding	Nalcn	utr5	ENSMUSG00000000197	NonProperStrand	12	chr10	23505152	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.9771
chr8	127407452	127407468	protein_coding	Gnpat	exon	ENSMUSG00000031985	NonProperStrand	13	chr11	6428103	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-6.1494
chr15	81110991	81111009	SINE	ID4	ID	chr15ID481110956	ProperStrand	272	chr3	94251934	94251988	protein_coding	Mrpl9	utr3	ENSMUSG00000028140	ProperStrand	4	1	-15.9439
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr19	44480990	44481059	protein_coding	Scd1	exon	ENSMUSG00000037071	ProperStrand	32	1	-9.5811
chr17	39979943	39980011	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	1	-2.2067
chr8	96556215	96556295	protein_coding	Nudt21	exon	ENSMUSG00000031754	ProperStrand	33	chr3	123210854	123210894	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.0977
chr11	42440243	42440259	protein_coding	Gabrb2	exon	ENSMUSG00000007653	ProperStrand	248	chr11	107510641	107510677	protein_coding	Helz	intron	ENSMUSG00000020721	ProperStrand	60	1	-10.4681
chr12	76976012	76976035	protein_coding	Syne2	intron	ENSMUSG00000063450	NonProperStrand	17	chr5	74489596	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	5	-21.6997
chr18	35716661	35716761	lincRNA	Snhg4	intron	ENSMUSG00000090430	ProperStrand	270	chr15	98350145	98350183	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	4	-7.7152
chr8	63583002	63583020	protein_coding	Nek1	exon	ENSMUSG00000031644	ProperStrand	23	chr7	116663634	116663767	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-10.4142
chr1	43157647	43167863	protein_coding	AI597479	exon	ENSMUSG00000010290	ProperStrand	36	chr7	118219574	118219633	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-5.1539
chr7	150687624	150687714	protein_coding	Phlda2	utr3	ENSMUSG00000010760	ProperStrand	8	chr14	76247739	76247821	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-8.2107
chr2	60159946	60161884	protein_coding	Ly75	exon	ENSMUSG00000026980	ProperStrand	59	chr4	116826700	116826766	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-6.8148
chr12	93058532	93061997	protein_coding	Sel1l	exon	ENSMUSG00000020964	ProperStrand	27	chr15	79913292	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-5.1173
chr13	43233301	43233319	protein_coding	Phactr1	utr3	ENSMUSG00000054728	NonProperStrand	10	chr16	23111401	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.3721
chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	chr9	62695427	62696973	protein_coding	Cln6	exon	ENSMUSG00000032245	ProperStrand	34	1	-10.7249
chr16	4886395	4886411	protein_coding	Mgrn1	exon	ENSMUSG00000022517	NonProperStrand	157	chr15	102305031	102305076	protein_coding	Pcbp2	exon	ENSMUSG00000056851	ProperStrand	164	1	-9.3670
chr10	28311834	28315645	protein_coding	Ptprk	exon	ENSMUSG00000019889	ProperStrand	45	chr11	69483136	69483263	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-5.1232
chr16	18255642	18256783	protein_coding	Dgcr8	exon	ENSMUSG00000022718	ProperStrand	67	chr9	107191483	107191583	protein_coding	Mapkapk3	exon	ENSMUSG00000032577	ProperStrand	16	3	-inf
chr19	37084619	37084669	protein_coding	Btaf1	exon	ENSMUSG00000040565	ProperStrand	23	chr19	8800359	8800449	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-5.3675
chr4	106261080	106261148	protein_coding	Dhcr24	utr3	ENSMUSG00000034926	ProperStrand	94	chr4	131865920	131865989	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-2.1888
chrX	19683228	19683244	protein_coding	Slc9a7	exon	ENSMUSG00000037341	NonProperStrand	136	chr17	27559700	27559717	protein_coding	Grm4	utr3	ENSMUSG00000063239	ProperStrand	147	1	-9.8727
chr2	41199972	41199989	protein_coding	Lrp1b	exon	ENSMUSG00000049252	ProperStrand	376	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-1.8878
chr7	52309977	52309993	protein_coding	Prrg2	exon	ENSMUSG00000007837	NonProperStrand	281	chr10	75322188	75322228	protein_coding	Mif	utr3	ENSMUSG00000033307	ProperStrand	146	1	-8.4383
chr7	53179701	53179737	protein_coding	Ccdc114	utr5	ENSMUSG00000040189	ProperStrand	2	chr7	116664848	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-9.7350
chrX	101491182	101491198	protein_coding	Abcb7	exon	ENSMUSG00000031333	ProperStrand	22	chr1	162965981	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-5.5331
chr9	110844832	110848615	protein_coding	Tdgf1	exon	ENSMUSG00000032494	ProperStrand	218	chr7	29136565	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-1.2455
chr2	90235312	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	120467088	120468467	protein_coding	Cecr5	exon	ENSMUSG00000058979	ProperStrand	97	1	-3.5607
chr2	158182156	158182179	lincRNA	9430008C03Rik	intron	ENSMUSG00000085385	ProperStrand	1039	chr11	115510194	115510259	protein_coding	Grb2	intron	ENSMUSG00000059923	ProperStrand	12	2	-17.1008
chr2	26494830	26494899	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr1	162966222	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	5	-6.6741
chr17	30763561	30763600	protein_coding	Dnahc8	intron	ENSMUSG00000033826	NonProperStrand	40	chr14	57205095	57205112	protein_coding	Parp4	intron	ENSMUSG00000054509	NonProperStrand	113	1	-12.8630
chr15	79910819	79913355	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr5	121655016	121655154	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	40	-2.3779
chr13	34980041	34980137	protein_coding	Prpf4b	exon	ENSMUSG00000021413	ProperStrand	50	chr18	35716833	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.4759
chr10	114731855	114731945	protein_coding	Rab21	intron	ENSMUSG00000020132	ProperStrand	8	chr7	116663634	116663714	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-6.3908
chr18	62567495	62567511	protein_coding	Htr4	intron	ENSMUSG00000026322	ProperStrand	18	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-6.6051
chr6	95079427	95079443	protein_coding	Kbtbd8	utr3	ENSMUSG00000030031	ProperStrand	26	chr3	123210943	123210985	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.5360
chr14	70744699	70744717	protein_coding	Slc39a14	intron	ENSMUSG00000022094	NonProperStrand	2	chr19	44079677	44079693	protein_coding	Cyp2c44	utr3	ENSMUSG00000025197	NonProperStrand	21	1	-inf
chr1	40519305	40519321	protein_coding	Il1rl1	utr3	ENSMUSG00000026069	ProperStrand	1	chr1	145626057	145626173	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-inf
chr16	11144205	11144278	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr1	69972492	69972509	protein_coding	Spag16	utr3	ENSMUSG00000053153	ProperStrand	16	1	-13.1474
chr9	120038470	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	chr7	52382234	52382314	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	7	-2.6405
chr8	13876119	13876209	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	chr12	92811896	92811976	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	3	-6.8670
chr19	8798490	8798553	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	chr5	92485118	92485218	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	1	-1.2345
chr11	45699037	45723160	protein_coding	Clint1	intron	ENSMUSG00000006169	NonProperStrand	273	chr11	6428060	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-2.8170
chr19	4114582	4114623	protein_coding	Aip	utr3	ENSMUSG00000024847	ProperStrand	5	chr17	24857718	24857808	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-7.1522
chr16	38445931	38446031	protein_coding	Adprh	exon	ENSMUSG00000002844	ProperStrand	30	chr1	162966853	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	3	-17.2546
chr14	37692432	37692452	protein_coding	Gcap14	exon	ENSMUSG00000058690	ProperStrand	10	chr7	116663689	116663767	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-9.7913
chr11	107534044	107534068	protein_coding	Helz	exon	ENSMUSG00000020721	ProperStrand	60	chr18	35716788	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-3.8920
chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	chr16	90386836	90386853	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	1	-7.0143
chr10	41172658	41172712	protein_coding	Zbtb24	intron	ENSMUSG00000019826	ProperStrand	17	chr16	23110966	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.8783
chr9	39358287	39358304	protein_coding	Olfr958	exon	ENSMUSG00000050853	NonProperStrand	266	chr2	130103751	130103825	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-5.5275
chr4	46550250	46550330	protein_coding	Coro2a	utr3	ENSMUSG00000028337	ProperStrand	3	chrX	71517861	71517951	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-12.8913
chr15	79910136	79910241	protein_coding	Rpl3	exon	ENSMUSG00000060036	ProperStrand	8342	chr7	109148988	109149009	protein_coding	Numa1	exon	ENSMUSG00000066306	ProperStrand	148	1	-2.0185
chr7	139230178	139230198	protein_coding	Fgfr2	intron	ENSMUSG00000030849	ProperStrand	100	chr7	89823017	89823063	protein_coding	Eftud1	exon	ENSMUSG00000038563	ProperStrand	12	1	-15.5792
chr15	54944092	54944147	protein_coding	Deptor	exon	ENSMUSG00000022419	ProperStrand	17	chr19	8800377	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-5.9706
chr2	90235314	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	148790907	148795763	protein_coding	Ap2a2	exon	ENSMUSG00000002957	ProperStrand	76	1	-4.0146
chr9	70256559	70256639	protein_coding	Ccnb2	intron	ENSMUSG00000032218	ProperStrand	54	chr11	6428060	6428150	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.3840
chr18	42404510	42404526	protein_coding	Lars	exon	ENSMUSG00000024493	ProperStrand	69	chr1	88247756	88247863	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	4	-15.1167
chr17	43153801	43153837	protein_coding	Tnfrsf21	utr5	ENSMUSG00000023915	ProperStrand	36	chr10	90076970	90076990	protein_coding	Anks1b	intron	ENSMUSG00000058589	NonProperStrand	230	1	-11.6498
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr7	129311263	129312092	protein_coding	Plk1	exon	ENSMUSG00000030867	ProperStrand	146	1	-4.1873
chr12	112907801	112907825	protein_coding	Ckb	exon	ENSMUSG00000001270	ProperStrand	28	chr16	23110913	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.1386
chr5	30074922	30105372	protein_coding	Dnajb6	exon	ENSMUSG00000029131	ProperStrand	81	chr16	23110890	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-1.4289
chr17	24665469	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	chr11	116533861	116533881	snoRNA	ENSMUSG00000065640_Snord1c	.	ENSMUSG00000065640	ProperStrand	373	2	-3.1129
chr11	95819098	95819189	protein_coding	Igf2bp1	utr3	ENSMUSG00000013415	ProperStrand	140	chr9	72587984	72589437	protein_coding	Nedd4	exon	ENSMUSG00000032216	ProperStrand	308	1	-8.3394
chr15	100004940	100005700	protein_coding	Dip2b	exon	ENSMUSG00000023026	ProperStrand	48	chr5	111121066	111121098	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-6.8772
chr11	69491710	69492156	protein_coding	Senp3	exon	ENSMUSG00000005204	ProperStrand	65	chr10	18393547	18393563	protein_coding	D10Bwg1379e	intron	ENSMUSG00000019852	NonProperStrand	120	1	-11.7607
chr1	108676541	108676588	protein_coding	Vps4b	exon	ENSMUSG00000009907	ProperStrand	29	chr7	148634716	148634806	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-8.8620
chr19	42199431	42199447	protein_coding	Avpi1	exon	ENSMUSG00000018821	NonProperStrand	9	chr4	102414551	102414569	protein_coding	Sgip1	intron	ENSMUSG00000028524	NonProperStrand	5	1	-18.8319
chr6	37110293	37110309	protein_coding	Dgki	intron	ENSMUSG00000038665	NonProperStrand	16	chr17	24857716	24857775	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-7.9145
chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	chr7	118219592	118219635	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-0.9569
chr3	33975699	33975779	protein_coding	Dnajc19	intron	ENSMUSG00000027679	NonProperStrand	4	chr4	131908707	131908797	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-6.2660
chr7	20116458	20116483	protein_coding	Ppp1r37	utr3	ENSMUSG00000051403	ProperStrand	34	chr11	68886941	68887025	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	4	-16.2334
chr17	24857760	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	chr13	21998976	21999056	tRNA	tRNA82-MetCAT	.	917228	ProperStrand	44	2	-4.9370
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr2	181405343	181405359	protein_coding	Sox18	exon	ENSMUSG00000046470	ProperStrand	96	1	-8.4283
chr16	78038887	78038905	LTR	MLT1A0	MaLR	chr16MLT1A078038834	ProperStrand	1	chr4	131908816	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-inf
chr8	104510035	104510052	LINE	L1_Rod	L1	chr8L1_Rod104509928	NonProperStrand	26	chr8	96704078	96704154	protein_coding	Mt1	utr3	ENSMUSG00000031765	ProperStrand	92	2	-inf
chr2	19314954	19314972	protein_coding	Msrb2	exon	ENSMUSG00000023094	ProperStrand	4	chr16	11144201	11144301	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	1	-16.1302
chr7	53176201	53176217	protein_coding	Emp3	utr5	ENSMUSG00000040212	ProperStrand	6	chr16	23110453	23110508	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-6.9463
chr8	107775606	107775696	protein_coding	D230025D16Rik	utr3	ENSMUSG00000031889	ProperStrand	20	chr2	26768368	26768392	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-7.7939
chr9	21208571	21209146	protein_coding	Ilf3	exon	ENSMUSG00000032178	ProperStrand	164	chr11	69481387	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-1.5290
chrX	99341624	99341697	protein_coding	Ercc6l	exon	ENSMUSG00000051220	ProperStrand	3	chr7	116664817	116664907	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-8.6415
chr17	39980044	39980130	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr1	88252837	88252894	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-1.1916
mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr5	147646795	147646848	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	2	-2.2831
chr11	69870769	69870785	protein_coding	Asgr1	exon	ENSMUSG00000020884	NonProperStrand	145	chr11	6428108	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.7064
chr13	9833565	9833672	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr15	81977912	82000211	protein_coding	Srebf2	exon	ENSMUSG00000022463	ProperStrand	592	2	-2.0645
chr10	76558910	76558965	protein_coding	Col18a1	exon	ENSMUSG00000001435	ProperStrand	287	chr7	118219574	118219609	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-2.7703
chr1	89596278	89597753	protein_coding	Inpp5d	exon	ENSMUSG00000026288	ProperStrand	75	chrX	34622906	34622923	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-2.7739
chr2	170342119	170342156	protein_coding	Pfdn4	exon	ENSMUSG00000052033	ProperStrand	55	chr11	69481335	69481432	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	3	-8.4292
chr10	48338780	48338797	LINE	Lx5	L1	chr10Lx548337987	ProperStrand	6	chr16	23111690	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-6.2752
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr7	88471252	88472915	protein_coding	Pde8a	exon	ENSMUSG00000025584	ProperStrand	25	1	-7.6490
chr13	95335924	95336004	protein_coding	Ap3b1	utr3	ENSMUSG00000021686	ProperStrand	96	chr2	26493391	26493481	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-2.8886
chr17	35278417	35278507	protein_coding	Bag6	exon	ENSMUSG00000024392	ProperStrand	181	chr8	87518802	87518882	protein_coding	Hook2	exon	ENSMUSG00000052566	ProperStrand	204	1	-8.6477
chr2	90235314	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	123170494	123171189	protein_coding	Macf1	exon	ENSMUSG00000028649	ProperStrand	320	1	-1.5469
chr5	125531369	125531385	protein_coding	Ncor2	exon	ENSMUSG00000029478	ProperStrand	377	chr15	79908931	79908956	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-2.1085
chr10	127180950	127181040	protein_coding	Zbtb39	utr3	ENSMUSG00000044617	ProperStrand	9	chr7	148634705	148634785	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-7.7646
chr6	142351666	142351683	protein_coding	Golt1b	utr3	ENSMUSG00000030245	NonProperStrand	4	chr1	162968442	162968470	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-11.7228
chrX	148696858	148701137	protein_coding	Kdm5c	exon	ENSMUSG00000025332	ProperStrand	139	chr14	76247726	76247816	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-2.6431
chr13	15569895	15569913	protein_coding	Gli3	exon	ENSMUSG00000021318	ProperStrand	54	chr9	120037897	120037922	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-4.9091
chr9	15119287	15119408	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	chr5	130300417	130300556	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	81	-inf
chr17	34762602	34762644	protein_coding	Ppt2	exon	ENSMUSG00000015474	ProperStrand	17	chr8	32260335	32260424	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-7.1260
chr18	32070967	32070983	protein_coding	Sft2d3	utr5	ENSMUSG00000044982	ProperStrand	10	chr11	62418044	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-9.1787
chr7	71034626	71034657	protein_coding	Klf13	utr3	ENSMUSG00000052040	ProperStrand	28	chr16	23111772	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.2134
chr11	6519810	6519944	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	chr3	123210853	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	16	-4.4878
chr5	114053094	114053111	SINE	ID_B1	B4	chr5ID_B1114052954	NonProperStrand	3	chr4	120566167	120566214	protein_coding	Rims3	utr3	ENSMUSG00000032890	ProperStrand	18	1	-22.0931
chr5	136611800	136611816	protein_coding	Lrwd1	exon	ENSMUSG00000029703	NonProperStrand	51	chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-6.7765
chr7	96487122	96487212	protein_coding	Tmem135	utr5	ENSMUSG00000039428	ProperStrand	18	chr11	77996563	77996624	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	9	-20.0522
chr19	5274328	5274401	protein_coding	Sf3b2	utr3	ENSMUSG00000024853	ProperStrand	102	chr8	74008400	74008417	protein_coding	Ano8	exon	ENSMUSG00000034863	NonProperStrand	171	2	-15.9467
mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr10	34024406	34024423	protein_coding	Nt5dc1	utr3	ENSMUSG00000039480	ProperStrand	16	1	-8.5577
chr14	76247708	76247842	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	chr15	98350142	98350283	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	37	-16.3145
chr2	90235293	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	119759963	119759979	protein_coding	Rptor	utr3	ENSMUSG00000025583	ProperStrand	76	1	-4.0146
chr6	71137063	71137143	LINE	Lx2	L1	chr6Lx271136997	NonProperStrand	1	chr6	71136927	71137017	LTR	MTC	MaLR	chr6MTC71136714	NonProperStrand	1	1	-inf
chr4	62157484	62157549	protein_coding	Bspry	exon	ENSMUSG00000028392	ProperStrand	7	chr11	69483134	69483188	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-6.6014
chr9	120037993	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	chr1	162967781	162967806	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	4	-7.4712
chr10	126889074	126889748	protein_coding	R3hdm2	exon	ENSMUSG00000025404	NonProperStrand	6	chr6	124665248	124665285	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	1	-11.6766
chr10	120709244	120712786	protein_coding	Tbc1d30	exon	ENSMUSG00000052302	ProperStrand	233	chr2	32818890	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-2.9246
chr13	68759738	68764669	protein_coding	Adcy2	exon	ENSMUSG00000021536	ProperStrand	237	chr4	132394423	132394452	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	1	-6.4068
chr2	32563527	32563544	protein_coding	Cdk9	exon	ENSMUSG00000009555	NonProperStrand	49	chrX	96245892	96245908	protein_coding	Stard8	intron	ENSMUSG00000031216	ProperStrand	142	1	-11.9934
chr9	122926799	122927187	protein_coding	Kif15	exon	ENSMUSG00000036768	ProperStrand	46	chr7	117189944	117189981	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	3	-9.4078
chr16	57391634	57391724	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr10	39978367	39978457	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	NonProperStrand	27	1	-11.9204
chr2	15003054	15003127	protein_coding	Arl5b	utr3	ENSMUSG00000017418	ProperStrand	55	chr19	4563491	4563581	protein_coding	Pcx	intron	ENSMUSG00000024892	ProperStrand	70	9	-20.2969
chr8	109189400	109190163	protein_coding	Cdh1	exon	ENSMUSG00000000303	ProperStrand	283	chr1	138382212	138382230	protein_coding	Kif14	intron	ENSMUSG00000041498	NonProperStrand	36	1	-11.2349
chr11	102543488	102543532	protein_coding	Gm1564	utr3	ENSMUSG00000051455	ProperStrand	3	chr4	131908233	131908272	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-7.2242
mmu-miR-6240	2	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr2	38589184	38589201	protein_coding	Nr6a1	intron	ENSMUSG00000063972	ProperStrand	52	1	-6.1857
chr11	113423607	113423624	protein_coding	Slc39a11	intron	ENSMUSG00000041654	NonProperStrand	39	chr13	46765433	46765517	protein_coding	C78339	exon	ENSMUSG00000069237	ProperStrand	8	1	-17.6839
chr10	77890222	77890312	protein_coding	Cstb	utr3	ENSMUSG00000005054	ProperStrand	10	chr12	81492627	81492707	snoRNA	ENSMUSG00000088158_Scarna3b	.	ENSMUSG00000088158	ProperStrand	147	1	-15.1747
chr17	83765916	83765932	protein_coding	Eml4	intron	ENSMUSG00000032624	NonProperStrand	2	chr5	108336431	108336487	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-12.2768
chr11	94420883	94422570	protein_coding	Acsf2	exon	ENSMUSG00000076435	ProperStrand	34	chr7	116664848	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	4	-11.9873
chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	chr5	151755616	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	2	-5.8007
chr7	17502047	17502163	protein_coding	Calm3	utr3	ENSMUSG00000019370	ProperStrand	28	chr1	63225672	63225708	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	3	-18.1924
chrX	17731267	17731284	SINE	B4	B4	chrXB417731137	ProperStrand	1	chr10	80642379	80642465	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-inf
chr13	69756913	69756956	protein_coding	Nsun2	intron	ENSMUSG00000021595	ProperStrand	110	chr1	166369470	166371656	protein_coding	Atp1b1	exon	ENSMUSG00000026576	ProperStrand	67	5	-20.4462
chr2	94265774	94265794	protein_coding	Api5	exon	ENSMUSG00000027193	ProperStrand	51	chr4	131908706	131908796	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.4523
chrX	83547356	83547372	protein_coding	Mageb4	intron	ENSMUSG00000035427	NonProperStrand	191	chr4	131865855	131865944	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-1.5421
chr10	41249338	41249414	protein_coding	Cd164	utr3	ENSMUSG00000019818	ProperStrand	38	chr16	23111779	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-4.6859
chr7	35442153	35442224	antisense	Gm12781	.	ENSMUSG00000085923	ProperStrand	2	chr19	8800355	8800445	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-inf
chr19	6298249	6298349	protein_coding	Ehd1	exon	ENSMUSG00000024772	ProperStrand	30	chr14	76247795	76247843	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-5.5134
chr19	45832840	45832894	protein_coding	Mgea5	exon	ENSMUSG00000025220	ProperStrand	53	chrX	156083137	156083154	protein_coding	Sh3kbp1	intron	ENSMUSG00000040990	NonProperStrand	6	1	-18.1770
chr17	30730177	30730203	protein_coding	Glo1	utr3	ENSMUSG00000024026	ProperStrand	75	chr4	116827159	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-6.5977
chr2	90235305	90235340	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr15	82052772	82052807	protein_coding	Tnfrsf13c	utr3	ENSMUSG00000068105	NonProperStrand	4	1	-10.0500
chr14	66186637	66186743	protein_coding	Elp3	intron	ENSMUSG00000022031	ProperStrand	71	chr18	20123591	20123608	protein_coding	Dsc3	intron	ENSMUSG00000059898	ProperStrand	31	1	-14.3074
chr17	84617875	84683274	protein_coding	Thada	intron	ENSMUSG00000024251	ProperStrand	47	chr4	131908264	131908355	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-3.2856
chr1	91358413	91358430	protein_coding	Agap1	intron	ENSMUSG00000055013	ProperStrand	229	chr3	34548949	34549049	protein_coding	Sox2	utr5	ENSMUSG00000074637	ProperStrand	299	1	-7.4205
chr17	24858774	24858838	protein_coding	Rps2	utr3	ENSMUSG00000044533	ProperStrand	373	chr2	63936035	63936053	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	3	-10.2935
chr2	90525181	90540332	protein_coding	Nup160	exon	ENSMUSG00000051329	ProperStrand	49	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-6.1940
chr1	194571767	194571852	snRNA	ENSMUSG00000064881_U5	.	ENSMUSG00000064881	ProperStrand	187	chr9	15119719	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-0.9184
chr11	69369755	69370226	protein_coding	Efnb3	exon	ENSMUSG00000003934	ProperStrand	2	chr8	98269959	98270059	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-12.9619
chr11	30054244	30054340	protein_coding	Spnb2	exon	ENSMUSG00000020315	ProperStrand	103	chr18	82662186	82662202	protein_coding	Mbp	intron	ENSMUSG00000041607	NonProperStrand	185	1	-9.9693
chr13	52742450	52742466	protein_coding	Syk	utr3	ENSMUSG00000021457	NonProperStrand	125	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.2951
chr3	153575089	153575111	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	chr1	162967489	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	3	-1.0133
chr10	62869940	62871022	protein_coding	Dnajc12	exon	ENSMUSG00000036764	ProperStrand	4	chr19	8799022	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-11.4702
chr5	137230123	137230175	protein_coding	Emid2	exon	ENSMUSG00000004415	ProperStrand	8	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	1	-11.1493
chr15	94409599	94409700	protein_coding	Twf1	utr3	ENSMUSG00000022451	ProperStrand	32	chr19	8798507	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-6.4500
chr9	99484658	99484680	protein_coding	Dbr1	utr3	ENSMUSG00000032469	ProperStrand	162	chr11	6428089	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.5402
chr2	180574008	180574026	lincRNA	Gm14342	intron	ENSMUSG00000086166	ProperStrand	1	chr4	131933295	131933363	protein_coding	Phactr4	exon	ENSMUSG00000066043	ProperStrand	29	1	-inf
chr8	73360866	73360907	protein_coding	Arrdc2	exon	ENSMUSG00000002910	ProperStrand	13	chr10	126433993	126434083	protein_coding	Ctdsp2	utr3	ENSMUSG00000078429	ProperStrand	74	8	-inf
chr9	31218970	31221654	protein_coding	Nfrkb	exon	ENSMUSG00000042185	ProperStrand	34	chr4	122968595	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	6	-19.3912
chr5	14977911	14977927	protein_coding	Gm10354	intron	ENSMUSG00000072188	ProperStrand	16	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.7293
chr16	75761550	75765200	protein_coding	Hspa13	exon	ENSMUSG00000032932	NonProperStrand	57	chr9	15119631	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-4.7546
chr11	100181344	100181444	protein_coding	Eif1	utr5	ENSMUSG00000035530	ProperStrand	115	chr2	26493364	26493393	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-2.5740
chr11	43495516	43495534	protein_coding	Pwwp2a	utr5	ENSMUSG00000044950	NonProperStrand	18	chr16	23110828	23110871	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7867
chr14	51463983	51463999	protein_coding	Tep1	exon	ENSMUSG00000006281	NonProperStrand	73	chr3	97950243	97950265	protein_coding	Notch2	exon	ENSMUSG00000027878	ProperStrand	86	1	-12.1960
chr8	95355006	95355022	protein_coding	Mmp2	intron	ENSMUSG00000031740	ProperStrand	42	chr18	73693170	73693186	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-6.2262
chr10	79452924	79452942	protein_coding	Cnn2	intron	ENSMUSG00000004665	ProperStrand	12	chr5	54389949	54389966	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	1	-14.0613
chr4	96167871	96167888	protein_coding	Cyp2j8	exon	ENSMUSG00000082932	NonProperStrand	6	chr11	62418034	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-10.2731
chr7	29136535	29136576	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	chr3	90279766	90279859	tRNA	tRNA792-MetCAT	.	539119	ProperStrand	42	1	-2.9861
chr19	55998429	55998445	protein_coding	Tcf7l2	utr3	ENSMUSG00000024985	ProperStrand	103	chr17	35089181	35089232	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-4.4421
chr18	12233710	12233727	protein_coding	6030446N20Rik	intron	ENSMUSG00000049411	NonProperStrand	3	chr1	89673600	89673690	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-9.4507
chr9	104020168	104020185	protein_coding	Acad11	intron	ENSMUSG00000090150	ProperStrand	17	chr11	62416599	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-7.6793
chr7	140141746	140141838	protein_coding	Zranb1	exon	ENSMUSG00000030967	ProperStrand	13	chr14	64081495	64081513	protein_coding	Fam167a	utr3	ENSMUSG00000035095	ProperStrand	80	1	-15.8578
chr9	120213232	120213250	protein_coding	Myrip	utr5	ENSMUSG00000041794	NonProperStrand	5	chr4	131908689	131908720	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.7672
chr7	148049226	148049244	protein_coding	Ric8	utr3	ENSMUSG00000025485	ProperStrand	5	chr1	95646948	95647018	protein_coding	Thap4	exon	ENSMUSG00000026279	ProperStrand	10	1	-19.1587
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr17	35087895	35087939	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-1.3562
chr14	49693710	49693731	protein_coding	Mudeng	exon	ENSMUSG00000036291	ProperStrand	4	chr9	15130745	15130831	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	1	-14.8896
chr11	42440243	42440259	protein_coding	Gabrb2	exon	ENSMUSG00000007653	ProperStrand	248	chr9	15118245	15118271	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-1.1561
chr5	34084633	34084649	protein_coding	Letm1	utr3	ENSMUSG00000005299	NonProperStrand	145	chr6	70794802	70794820	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	1	-9.6515
chr7	29171540	29171558	protein_coding	Med29	utr3	ENSMUSG00000003444	NonProperStrand	134	chr10	23505151	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-3.3796
chr9	21309964	21310027	protein_coding	Dnm2	exon	ENSMUSG00000033335	ProperStrand	48	chr3	123210889	123210979	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	4	-8.9061
chr13	56737975	56738509	protein_coding	Tgfbi	exon	ENSMUSG00000035493	ProperStrand	9	chr15	34370547	34370647	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-7.2969
chr9	105320421	105320893	protein_coding	Atp2c1	exon	ENSMUSG00000032570	ProperStrand	21	chrX	34622906	34622923	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-8.5453
chr11	116106543	116133269	protein_coding	Srp68	utr3	ENSMUSG00000020780	ProperStrand	42	chr10	23505152	23505282	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-3.2403
chr15	99070172	99070188	protein_coding	Kcnh3	exon	ENSMUSG00000037579	NonProperStrand	44	chr11	69483205	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.9921
chr9	72969069	72969089	protein_coding	Rsl24d1	exon	ENSMUSG00000032215	ProperStrand	8	chr9	15118246	15118321	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-7.4559
chr2	57900146	57900162	protein_coding	Ermn	utr3	ENSMUSG00000026830	ProperStrand	27	chr18	20859280	20859319	protein_coding	B4galt6	exon	ENSMUSG00000056124	ProperStrand	31	1	-16.2120
chr7	118222834	118225107	protein_coding	Eif4g2	exon	ENSMUSG00000005610	ProperStrand	134	chrX	34622917	34623007	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-3.3077
chr9	108109933	108109953	protein_coding	Dag1	exon	ENSMUSG00000039952	ProperStrand	54	chr2	130101996	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	5	-18.9457
chr7	107065549	107065565	protein_coding	Xrra1	exon	ENSMUSG00000035211	NonProperStrand	24	chr15	79908930	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-7.2930
chr1	89848879	89848898	protein_coding	Usp40	intron	ENSMUSG00000005501	NonProperStrand	4	chr6	97112810	97112832	snoRNA	ENSMUSG00000065728_SNORA36	.	ENSMUSG00000065728	ProperStrand	158	1	-17.0228
chr9	15118245	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	chr3	96528187	96528287	snoRNA	ENSMUSG00000065669_SNORA5	.	ENSMUSG00000065669	ProperStrand	180	6	-10.6798
chr1	153210565	153210608	protein_coding	Ivns1abp	utr3	ENSMUSG00000023150	ProperStrand	51	chr2	127427137	127428181	protein_coding	Mrps5	exon	ENSMUSG00000027374	ProperStrand	84	1	-12.9672
chr2	26493427	26493517	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr2	109740207	109740268	protein_coding	Lin7c	utr3	ENSMUSG00000027162	ProperStrand	15	4	-inf
chr2	29926946	29927003	protein_coding	Set	utr3	ENSMUSG00000054766	ProperStrand	167	chr9	15119335	15119425	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	12	-22.2356
chr16	37777391	37777408	protein_coding	Fstl1	exon	ENSMUSG00000022816	ProperStrand	179	chr7	24713726	24713742	protein_coding	Vmn1r179	exon	ENSMUSG00000046924	NonProperStrand	69	1	-10.8393
chr2	38280204	38280224	lincRNA	Gm13589	intron	ENSMUSG00000085950	NonProperStrand	31	chr10	127521199	127521270	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	1	-10.1250
chr4	131908729	131908891	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	chr7	16524109	16524200	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	6	-0.7455
chrX	115443369	115443385	LINE	Lx3A	L1	chrXLx3A115443230	NonProperStrand	12	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-11.0125
chr14	87886023	87886103	protein_coding	Tdrd3	exon	ENSMUSG00000022019	ProperStrand	19	chr3	123210890	123210980	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-10.1742
chr7	126929655	126929698	protein_coding	Eri2	exon	ENSMUSG00000030929	ProperStrand	6	chr4	131908719	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.3738
chr11	48613953	48619071	protein_coding	Gnb2l1	utr5	ENSMUSG00000020372	ProperStrand	347	chr4	131908236	131908396	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	10	-3.7934
chr16	36967401	36967481	protein_coding	Fbxo40	intron	ENSMUSG00000047746	NonProperStrand	1	chr17	35995792	35995882	protein_coding	Mdc1	utr3	ENSMUSG00000061607	NonProperStrand	11	1	-inf
chr14	57385604	57385684	protein_coding	Pspc1	intron	ENSMUSG00000021938	ProperStrand	11	chr5	115940316	115940406	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	1	-12.1969
chr8	113579055	113579094	protein_coding	Aars	exon	ENSMUSG00000031960	ProperStrand	355	chrX	71517910	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	4	-10.6976
chr1	71645007	71645792	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr2	152771639	152771657	protein_coding	Dusp15	intron	ENSMUSG00000042662	ProperStrand	17	1	-10.3855
chr14	76247712	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	chr18	35102292	35102367	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	11	-4.5555
chr11	22874445	22874534	protein_coding	Zrsr1	utr3	ENSMUSG00000044068	ProperStrand	8	chr16	23111774	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	6	-19.0638
chr19	8899600	8899810	protein_coding	Hnrnpul2	exon	ENSMUSG00000071659	ProperStrand	93	chr9	71329289	71329320	protein_coding	Gcom1	exon	ENSMUSG00000092137	ProperStrand	55	2	-19.4186
chr1	141319671	141319687	protein_coding	Zbtb41	utr5	ENSMUSG00000033964	NonProperStrand	145	chr7	29136525	29136586	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.0404
chr15	96249896	96249986	protein_coding	Scaf11	exon	ENSMUSG00000033228	ProperStrand	37	chr16	23110455	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.3186
chr1	72290908	72290988	snRNA	ENSMUSG00000093111_AC120136.1	.	ENSMUSG00000093111	ProperStrand	137	chr12	106269353	106269443	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-2.6391
chr11	75307748	75307954	protein_coding	Prpf8	exon	ENSMUSG00000020850	ProperStrand	255	chr13	46862888	46862978	snoRNA	ENSMUSG00000064558_SNORA55	.	ENSMUSG00000064558	ProperStrand	187	13	-inf
chr13	12493727	12493817	protein_coding	Heatr1	exon	ENSMUSG00000050244	ProperStrand	74	chr7	150717345	150717425	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-5.0985
chr11	6520321	6520419	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	chr6	70805448	70805549	snoRNA	ENSMUSG00000065750_SNORA5	.	ENSMUSG00000065750	ProperStrand	165	3	-13.2116
chr1	133186224	133186283	protein_coding	Srgap2	exon	ENSMUSG00000026425	ProperStrand	299	chr10	83989627	83989643	protein_coding	Ckap4	utr3	ENSMUSG00000046841	ProperStrand	60	1	-10.0945
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr3	33713610	33713626	protein_coding	Ccdc39	exon	ENSMUSG00000027676	ProperStrand	106	1	-10.2273
chr19	46333652	46333668	protein_coding	Gbf1	exon	ENSMUSG00000025224	NonProperStrand	7	chr1	120578393	120578427	protein_coding	Tfcp2l1	utr3	ENSMUSG00000026380	ProperStrand	158	1	-15.8032
chr5	31379062	31379135	protein_coding	Cad	exon	ENSMUSG00000013629	ProperStrand	260	chr10	23505535	23505605	protein_coding	Rps12	intron	ENSMUSG00000061983	ProperStrand	309	1	-7.1042
chr7	31663114	31664217	protein_coding	Cd22	utr5	ENSMUSG00000030577	NonProperStrand	128	chr9	15119649	15119694	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.4192
chrX	7762918	7763828	protein_coding	Ebp	exon	ENSMUSG00000031168	ProperStrand	4	chr9	15119723	15119968	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-8.0470
chr7	87360523	87360577	protein_coding	Sema4b	exon	ENSMUSG00000030539	ProperStrand	54	chr13	96374713	96374729	protein_coding	F2r	exon	ENSMUSG00000048376	NonProperStrand	88	1	-12.7549
chr18	61630221	61630238	SINE	B3	B2	chr18B361630100	NonProperStrand	6	chr7	116663712	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-7.0045
chr2	90235294	90235326	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	149017785	149017816	protein_coding	Clstn1	exon	ENSMUSG00000039953	ProperStrand	173	2	-4.4456
chr16	4886395	4886411	protein_coding	Mgrn1	exon	ENSMUSG00000022517	NonProperStrand	157	chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-4.5816
chr11	117828808	117828868	protein_coding	Socs3	utr3	ENSMUSG00000053113	ProperStrand	137	chr3	95980325	95980410	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	7	-inf
chr2	90235297	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	39917317	39917333	protein_coding	Cyp2c69	utr3	ENSMUSG00000092008	NonProperStrand	83	1	-3.8496
chr8	86251808	86251998	protein_coding	Cd97	exon	ENSMUSG00000002885	ProperStrand	37	chr16	6881944	6881960	protein_coding	Rbfox1	intron	ENSMUSG00000008658	ProperStrand	29	1	-15.7828
chr5	130536499	130536516	protein_coding	Crcp	utr3	ENSMUSG00000025532	ProperStrand	6	chr9	110544350	110544366	protein_coding	Nbeal2	exon	ENSMUSG00000056724	ProperStrand	161	1	-16.0647
chr8	80041277	80041293	protein_coding	Arhgap10	intron	ENSMUSG00000037148	NonProperStrand	15	chr4	131908687	131908748	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-6.0926
chr2	26494706	26494799	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	chr13	96100554	96100694	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	4	-0.7090
chr3	89237275	89237365	protein_coding	Pygo2	exon	ENSMUSG00000047824	ProperStrand	7	chr10	23505165	23505245	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-5.0629
chr2	89368462	89368479	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	chr19	8799843	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	2	-4.0161
chr1	16092843	16092866	protein_coding	Rpl7	exon	ENSMUSG00000043716	ProperStrand	93	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.1370
chr1	130272840	130275366	protein_coding	Dars	exon	ENSMUSG00000026356	ProperStrand	28	chr15	31399374	31399421	protein_coding	March6	exon	ENSMUSG00000039100	ProperStrand	94	5	-19.1020
chr11	120424623	120424653	protein_coding	P4hb	exon	ENSMUSG00000025130	ProperStrand	83	chr1	55069059	55071340	protein_coding	Sf3b1	exon	ENSMUSG00000025982	ProperStrand	158	1	-10.7178
chr19	9052125	9052459	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	chr4	116827120	116827186	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-3.3462
chr18	75708056	75708073	protein_coding	Ctif	intron	ENSMUSG00000052928	ProperStrand	41	chr17	24857794	24857831	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.9570
chr3	145682870	145682917	protein_coding	Syde2	exon	ENSMUSG00000036863	ProperStrand	5	chr10	23505152	23505240	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-9.7958
chr4	32072692	32072782	protein_coding	Map3k7	exon	ENSMUSG00000028284	ProperStrand	16	chr16	23111416	23111496	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.4608
chr9	59516789	59516855	protein_coding	Pkm2	exon	ENSMUSG00000032294	NonProperStrand	18	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-10.5959
chr2	27742646	27742663	protein_coding	Col5a1	intron	ENSMUSG00000026837	NonProperStrand	4	chr3	108357255	108357391	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-10.1312
chrX	20246275	20246386	protein_coding	Uba1	exon	ENSMUSG00000001924	ProperStrand	156	chr3	123210854	123210906	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	9	-12.0461
chr4	126241214	126242178	protein_coding	Clspn	exon	ENSMUSG00000042489	ProperStrand	89	chr7	116663697	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-3.3969
chr1	72871219	72896171	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	chr2	26494708	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	11	-12.3360
chr9	105546700	105546717	protein_coding	Pik3r4	exon	ENSMUSG00000032571	ProperStrand	49	chr17	13112468	13112528	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	2	-8.2079
chr4	148319028	148319128	protein_coding	Casz1	utr3	ENSMUSG00000028977	ProperStrand	27	chr3	123210854	123210875	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.4658
chr12	107067273	107067331	protein_coding	Papola	exon	ENSMUSG00000021111	ProperStrand	67	chr19	8798753	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-4.5890
chr8	41570003	41570019	protein_coding	Zdhhc2	utr3	ENSMUSG00000039470	NonProperStrand	85	chr18	20904520	20904573	protein_coding	B4galt6	utr5	ENSMUSG00000056124	ProperStrand	31	1	-13.9432
chr14	56372138	56372493	protein_coding	2610027L16Rik	exon	ENSMUSG00000019297	ProperStrand	43	chr3	68889086	68889176	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-3.8727
chr5	33369568	33369603	protein_coding	Ywhah	exon	ENSMUSG00000018965	ProperStrand	81	chr10	23505185	23505275	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-0.8528
chr8	74906621	74906700	protein_coding	Eps15l1	exon	ENSMUSG00000006276	ProperStrand	42	chr4	131865855	131865945	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.3470
chr10	62050847	62051480	protein_coding	Ddx21	exon	ENSMUSG00000020075	ProperStrand	137	chr17	13112531	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-3.0462
chr8	83288830	83288952	protein_coding	Gab1	utr3	ENSMUSG00000031714	ProperStrand	72	chr7	118219574	118219610	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-3.8277
chrX	19683228	19683244	protein_coding	Slc9a7	exon	ENSMUSG00000037341	NonProperStrand	136	chr15	73584192	73584254	protein_coding	Ptp4a3	exon	ENSMUSG00000059895	ProperStrand	45	1	-12.2501
chr19	8798514	8798604	lincRNA	Snhg1	exon	ENSMUSG00000090867	ProperStrand	100	chr17	46447008	46447088	protein_coding	Abcc10	exon	ENSMUSG00000032842	ProperStrand	20	2	-20.4784
chr7	46821406	46821429	Unknown	MurSatRep1	Unknown	chr7MurSatRep146820040	ProperStrand	2	chr1	88252836	88252898	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	2	-inf
chr5	68022807	68038940	protein_coding	Atp8a1	exon	ENSMUSG00000037685	ProperStrand	20	chr16	23110529	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-7.5136
chr17	25296587	25296603	protein_coding	Clcn7	exon	ENSMUSG00000036636	ProperStrand	94	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-2.1888
chr2	163441434	163441450	protein_coding	Ttpal	utr3	ENSMUSG00000017679	ProperStrand	5	chr16	23110828	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-inf
chr7	30693578	30693594	protein_coding	Zfp420	intron	ENSMUSG00000058402	ProperStrand	11	chr7	86611350	86611379	tRNA	tRNA387-ArgTCG	.	1769234	ProperStrand	77	1	-16.2914
chr1	152268927	152269668	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	chrX	84483699	84483715	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-3.9552
chr13	8766291	8766307	protein_coding	Adarb2	utr3	ENSMUSG00000052551	ProperStrand	292	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-4.0914
chr7	86600978	86601349	protein_coding	Polg	exon	ENSMUSG00000039176	ProperStrand	93	chr5	130300493	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.7918
chr11	115128415	115128432	protein_coding	Grin2c	utr5	ENSMUSG00000020734	ProperStrand	12	chr3	132554382	132554398	protein_coding	Npnt	exon	ENSMUSG00000040998	ProperStrand	14	1	-inf
chr11	95625040	95625081	protein_coding	Zfp652	exon	ENSMUSG00000075595	ProperStrand	48	chr10	23505150	23505213	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-2.9082
chr11	42440243	42440259	protein_coding	Gabrb2	exon	ENSMUSG00000007653	ProperStrand	248	chr4	116826700	116826766	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-4.0314
chr12	78058599	78058699	protein_coding	Max	intron	ENSMUSG00000059436	ProperStrand	7	chrX	34622906	34622930	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-7.4170
chr11	117716645	117716717	protein_coding	Birc5	utr3	ENSMUSG00000017716	ProperStrand	16	chr12	112111628	112111718	protein_coding	Cinp	utr3	ENSMUSG00000021276	ProperStrand	18	5	-inf
chr17	45593764	45593854	protein_coding	Spats1	intron	ENSMUSG00000023935	NonProperStrand	9	chr17	24857717	24857797	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	7	-19.0187
chr4	99408267	99408284	protein_coding	Alg6	exon	ENSMUSG00000073792	NonProperStrand	3	chr5	108336363	108336409	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-11.1796
chr5	31378606	31378625	protein_coding	Cad	exon	ENSMUSG00000013629	ProperStrand	260	chr18	12172461	12172477	protein_coding	6030446N20Rik	intron	ENSMUSG00000049411	ProperStrand	235	1	-7.6462
chr5	59568147	59568237	LINE	L1_Mur1	L1	chr5L1_Mur159567900	NonProperStrand	1	chr5	59567645	59567725	LINE	L1_Mus2	L1	chr5L1_Mus259567453	ProperStrand	1	1	-inf
chr2	34993225	34993241	protein_coding	Cep110	exon	ENSMUSG00000057110	ProperStrand	20	chr4	131865930	131865981	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.6810
chr18	5766620	5766720	protein_coding	Zeb1	exon	ENSMUSG00000024238	ProperStrand	24	chr9	15118323	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-5.2164
chr18	77997276	77997293	protein_coding	Haus1	intron	ENSMUSG00000041840	NonProperStrand	4	chr4	131908689	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-6.2660
chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	chr2	32818802	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	2	-0.9225
chrX	132749001	132749020	protein_coding	Bex1	exon	ENSMUSG00000050071	ProperStrand	11	chr1	162965530	162965577	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-6.5834
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr9	120038564	120039538	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	4	-2.2248
chr1	139959861	139959877	protein_coding	Ptprc	utr3	ENSMUSG00000026395	ProperStrand	27	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-9.3465
chr1	182827704	182827794	protein_coding	Lefty2	exon	ENSMUSG00000066652	ProperStrand	48	chr9	120039545	120039625	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.7302
chr9	40611432	40611522	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr10	39978273	39978353	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-1.0083
chr6	83111671	83111687	protein_coding	1700003E16Rik	exon	ENSMUSG00000030030	ProperStrand	352	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	2	-6.4105
chr8	87366667	87368506	protein_coding	Calr	exon	ENSMUSG00000003814	ProperStrand	232	chr4	131908236	131908355	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-0.7067
chr16	33625643	33625662	protein_coding	Slc12a8	intron	ENSMUSG00000035506	ProperStrand	52	chr9	120038467	120038529	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.2976
chr9	78550961	78550977	protein_coding	Cd109	exon	ENSMUSG00000046186	NonProperStrand	36	chr19	8800394	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-7.4946
chr2	31924012	31924028	protein_coding	Fam78a	utr3	ENSMUSG00000050592	NonProperStrand	340	chr7	52382234	52382315	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-4.8709
chr4	79649111	79649152	pseudogene	Gm11407	.	ENSMUSG00000082179	ProperStrand	26	chr16	23111733	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	6	-18.1020
chr4	86500797	86501776	protein_coding	Rps6	exon	ENSMUSG00000028495	ProperStrand	263	chrX	143918833	143918885	snoRNA	ENSMUSG00000084421_SNORA35	.	ENSMUSG00000084421	ProperStrand	293	4	-19.4240
chr11	118900005	118900026	protein_coding	Cbx8	exon	ENSMUSG00000025578	ProperStrand	95	chr3	123210913	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-2.5907
chr1	162286088	162286104	protein_coding	Rabgap1l	intron	ENSMUSG00000026721	ProperStrand	44	chr4	117903425	117903468	protein_coding	Ptprf	exon	ENSMUSG00000033295	ProperStrand	337	1	-10.4804
chr1	122239202	122239220	protein_coding	C1ql2	utr3	ENSMUSG00000036907	ProperStrand	2	chr16	23110454	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-9.6327
chr1	162968458	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	chr10	23505559	23505627	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	2	-2.0301
chr9	78215860	78215950	protein_coding	Dppa5a	utr5	ENSMUSG00000060461	ProperStrand	79	chr9	95524997	95525035	snoRNA	ENSMUSG00000065346_SNORA4	.	ENSMUSG00000065346	ProperStrand	142	4	-inf
chr10	62044697	62061116	protein_coding	Ddx21	utr3	ENSMUSG00000020075	ProperStrand	137	chr4	131865855	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	5	-4.8880
chr9	59516359	59516896	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr17	24856620	24856752	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	3	-3.2361
chr3	8999064	8999134	protein_coding	Tpd52	intron	ENSMUSG00000027506	ProperStrand	37	chr11	106362624	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-8.3728
chr2	154617462	154617481	protein_coding-noncoding	Raly	utr5	ENSMUSG00000027593	NonProperStrand	1	chr17	86508593	86508610	protein_coding	Srbd1	exon	ENSMUSG00000024135	NonProperStrand	12	1	-inf
chr6	128384441	128384821	protein_coding	Fkbp4	exon	ENSMUSG00000030357	ProperStrand	114	chr10	110918549	110918629	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-2.3183
chr11	77995035	77996390	protein_coding	Rpl23a	exon	ENSMUSG00000058546	ProperStrand	121	chr9	15118322	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-3.9849
chr4	56850711	56851864	protein_coding	Ctnnal1	exon	ENSMUSG00000038816	ProperStrand	18	chr16	23111696	23111776	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.0433
chr10	13562823	13562840	protein_coding	Aig1	intron	ENSMUSG00000019806	ProperStrand	49	chr3	123210911	123210972	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.4031
chr6	49163752	49163768	protein_coding	Igf2bp3	intron	ENSMUSG00000029814	NonProperStrand	4	chr3	88603786	88603866	pseudogene	5830417I10Rik	.	ENSMUSG00000078684	ProperStrand	68	1	-18.3982
chr15	89186321	89186348	protein_coding	Ncaph2	exon	ENSMUSG00000008690	ProperStrand	65	chr12	109460710	109460726	protein_coding	Ccdc85c	intron	ENSMUSG00000084883	ProperStrand	157	1	-11.2222
chr11	67182895	67184426	protein_coding	Myh13	exon	ENSMUSG00000060180	ProperStrand	145	chr7	52382014	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-4.9846
chr1	136223393	136223473	protein_coding	Ppfia4	exon	ENSMUSG00000026458	ProperStrand	45	chr7	29136555	29136645	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.8631
chr15	103023169	103023241	protein_coding	Cbx5	utr3	ENSMUSG00000009575	ProperStrand	98	chr2	166692829	166692852	protein_coding	Arfgef2	exon	ENSMUSG00000074582	ProperStrand	32	1	-13.5998
chr5	123244479	123249421	protein_coding	Anapc5	exon	ENSMUSG00000029472	ProperStrand	92	chr3	108357601	108357664	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	4	-12.2763
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	31924012	31939594	protein_coding	Fam78a	intron	ENSMUSG00000050592	NonProperStrand	340	4	-6.0111
chr8	98237767	98237873	protein_coding	Ndrg4	utr3	ENSMUSG00000036564	ProperStrand	22	chr7	150717298	150717318	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	7	-inf
chr17	65962575	65962592	protein_coding	Vapa	exon	ENSMUSG00000024091	NonProperStrand	7	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.7768
chr11	29447705	29447861	protein_coding	Rps27a	utr5	ENSMUSG00000020460	ProperStrand	47	chr19	8963027	8963165	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-7.0399
chr19	56006450	56006466	protein_coding	Tcf7l2	utr3	ENSMUSG00000024985	NonProperStrand	22	chr9	120039533	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-5.2308
chr18	13149770	13149840	protein_coding	Impact	utr3	ENSMUSG00000024423	ProperStrand	32	chr4	131908804	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.1812
chrX	12868402	12868612	protein_coding	Ddx3x	exon	ENSMUSG00000000787	ProperStrand	67	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-3.3893
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr7	73072734	73072844	protein_coding	Pcsk6	exon	ENSMUSG00000030513	ProperStrand	32	2	-12.2268
chr14	30851615	30851631	protein_coding	Chdh	utr3	ENSMUSG00000015970	ProperStrand	50	chr2	32818884	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-5.8282
chr18	35102322	35102366	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	chr10	23506278	23506342	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	3	-3.1326
chr10	60818620	60818720	protein_coding	X99384	exon	ENSMUSG00000020092	ProperStrand	60	chr16	23111380	23111431	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	9	-16.1631
chr11	84722945	84722961	protein_coding	Myo19	exon	ENSMUSG00000020527	ProperStrand	82	chr2	170337006	170337022	protein_coding	Pfdn4	utr5	ENSMUSG00000052033	ProperStrand	55	1	-12.8604
chr11	94272403	94272420	protein_coding	Cacna1g	exon	ENSMUSG00000020866	ProperStrand	35	chr14	76247711	76247818	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-8.5844
chr4	11435215	11435315	protein_coding	1110037F02Rik	exon	ENSMUSG00000040720	ProperStrand	32	chr16	23110530	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.5869
chr16	33726533	33726550	protein_coding	Heg1	exon	ENSMUSG00000075254	NonProperStrand	37	chr4	131908689	131908893	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-7.5796
chr7	116078281	116078297	protein_coding	Eif3f	exon	ENSMUSG00000031029	NonProperStrand	20	chr4	131908688	131908795	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.0012
chr5	121655016	121655096	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	NonProperStrand	38	chr19	8799851	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	NonProperStrand	3	1	-inf
chr11	80183929	80187185	protein_coding	5730455P16Rik	exon	ENSMUSG00000057181	ProperStrand	28	chr8	32260335	32260422	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	8	-19.7729
chr11	102024211	102024308	protein_coding	Lsm12	utr3	ENSMUSG00000020922	ProperStrand	28	chr1	162965548	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.7132
chr7	106751016	106751087	protein_coding	Arrb1	utr3	ENSMUSG00000018909	ProperStrand	46	chr9	15118324	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	4	-12.9529
chr7	20309530	20309614	protein_coding	Pvrl2	utr3	ENSMUSG00000062300	ProperStrand	110	chr5	74489618	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	7	-18.1562
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr9	60717893	60717942	protein_coding	Uaca	exon	ENSMUSG00000034485	ProperStrand	109	2	-10.6680
chr8	121070498	121070517	protein_coding	Cdh13	intron	ENSMUSG00000031841	ProperStrand	60	chr1	162965531	162965564	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.2762
mmu-miR-6238	1	22	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr4	131908687	131908808	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-1.3241
chr4	134772139	134772812	protein_coding	Clic4	utr3	ENSMUSG00000037242	ProperStrand	84	chr19	8800377	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-5.0611
chr19	29690320	29691088	protein_coding	Ermp1	exon	ENSMUSG00000046324	ProperStrand	103	chr17	35299532	35299561	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-3.7538
chr16	96381307	96381323	protein_coding	Lca5l	exon	ENSMUSG00000045275	ProperStrand	2	chr2	26494761	26494802	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-10.3719
chr9	50816824	50816841	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	chr12	106269381	106269558	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	2	-4.8219
chr11	84808068	84819398	protein_coding	Usp32	exon	ENSMUSG00000000804	ProperStrand	45	chr19	8963085	8963124	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.7687
chr2	87802622	87802639	protein_coding	Olfr1157	exon	ENSMUSG00000075143	NonProperStrand	49	chr9	15119693	15119714	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-5.1738
chr5	108174820	108174850	protein_coding	Evi5	utr3	ENSMUSG00000011831	ProperStrand	18	chr8	24295047	24301198	protein_coding	Agpat6	exon	ENSMUSG00000031545	ProperStrand	11	2	-19.1093
chr16	34357475	34360910	protein_coding	Kalrn	exon	ENSMUSG00000061751	NonProperStrand	52	chr13	49779749	49779805	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-7.2985
chr6	33227263	33227298	protein_coding	Exoc4	exon	ENSMUSG00000029763	ProperStrand	120	chr1	63225597	63225705	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	6	-inf
chr4	43505757	43505847	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr5	93596706	93600429	protein_coding	Sept11	utr3	ENSMUSG00000058013	ProperStrand	79	9	-inf
chr8	73310100	73310118	protein_coding	Mast3	exon	ENSMUSG00000031833	ProperStrand	23	chr4	131908687	131908782	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.7500
chr10	127564468	127564568	protein_coding	Baz2a	utr3	ENSMUSG00000040054	ProperStrand	274	chr9	15119350	15119425	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-2.3242
chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	chr9	70960076	70960093	protein_coding	Aqp9	exon	ENSMUSG00000032204	NonProperStrand	118	1	-7.9223
chr9	21934462	21934478	protein_coding	Acp5	exon	ENSMUSG00000001348	ProperStrand	66	chrX	34401163	34401217	protein_coding	C330007P06Rik	intron	ENSMUSG00000006423	ProperStrand	3	1	-20.1561
chr10	127428422	127428438	protein_coding	Hsd17b6	exon	ENSMUSG00000025396	NonProperStrand	68	chr7	150717305	150717414	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	2	-8.6423
chr2	91335070	91335088	protein_coding	Lrp4	exon	ENSMUSG00000027253	NonProperStrand	5	chr7	52382757	52382809	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-11.8971
chr4	21685478	21685495	protein_coding	Ccnc	intron	ENSMUSG00000028252	ProperStrand	9	chr7	112782969	112782985	protein_coding	Arfip2	utr3	ENSMUSG00000030881	ProperStrand	191	1	-14.8772
chr2	181423761	181423782	protein_coding	Rgs19	utr3	ENSMUSG00000002458	NonProperStrand	10	chr6	125123174	125123478	protein_coding	Ncapd2	exon	ENSMUSG00000038252	ProperStrand	170	4	-inf
chr18	42388343	42388376	protein_coding	Lars	exon	ENSMUSG00000024493	ProperStrand	69	chr6	29119929	29119945	protein_coding	Prrt4	exon	ENSMUSG00000079654	NonProperStrand	18	1	-15.4716
chr3	97557099	97558119	protein_coding	Pde4dip	exon	ENSMUSG00000038170	ProperStrand	25	chr13	49779670	49779750	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-8.7716
chr7	20341807	20341903	protein_coding	Bcam	utr3	ENSMUSG00000002980	ProperStrand	43	chr2	79843543	79843559	protein_coding	Pde1a	intron	ENSMUSG00000059173	NonProperStrand	275	1	-10.9332
chr9	65120741	65120757	protein_coding	Cilp	exon	ENSMUSG00000042254	ProperStrand	212	chr19	8798740	8798759	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-2.4868
chrX	71517838	71517961	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	chr19	8799071	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	6	-4.5519
chr8	109184728	109184804	protein_coding	Cdh1	exon	ENSMUSG00000000303	ProperStrand	283	chr2	130103449	130103502	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-5.0106
chr10	23505419	23505610	protein_coding	Rps12	intron	ENSMUSG00000061983	ProperStrand	309	chr1	162967489	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	9	-13.0511
chr4	73386189	73386205	protein_coding	Rasef	exon	ENSMUSG00000043003	NonProperStrand	8	chr3	89765055	89767133	protein_coding	Atp8b2	utr5	ENSMUSG00000060671	ProperStrand	140	1	-15.7366
chr8	13416896	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr8	123029790	123029807	protein_coding	Gse1	intron	ENSMUSG00000031822	ProperStrand	97	1	-5.5106
chr2	94182399	94182440	protein_coding	Ttc17	intron	ENSMUSG00000027194	ProperStrand	13	chr7	116663635	116663725	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-8.9404
chr1	32601051	32601068	protein_coding	Khdrbs2	intron	ENSMUSG00000026058	ProperStrand	10	chr9	15118245	15118321	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-11.3916
chr10	82897769	82897859	LTR	MERVK26-int	ERVK	chr10MERVK26-int82897637	NonProperStrand	1	chr9	40612830	40612855	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	1	-inf
chr15	98481248	98481359	protein_coding	Ddx23	exon	ENSMUSG00000003360	ProperStrand	63	chr18	35714143	35714247	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	3	-8.4091
chr17	29839415	29839515	protein_coding	Ftsjd2	utr3	ENSMUSG00000024019	ProperStrand	31	chr11	69483135	69483194	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.6332
chr2	70522103	70526443	protein_coding	Gorasp2	exon	ENSMUSG00000014959	ProperStrand	21	chrX	143918835	143918885	snoRNA	ENSMUSG00000084421_SNORA35	.	ENSMUSG00000084421	ProperStrand	293	1	-12.2624
chr1	123455862	123455898	protein_coding	Ddx18	exon	ENSMUSG00000001674	ProperStrand	41	chr14	65370850	65370890	protein_coding	Kif13b	exon	ENSMUSG00000060012	ProperStrand	37	1	-15.0639
chr13	44964976	44965392	protein_coding	Jarid2	intron	ENSMUSG00000038518	ProperStrand	372	chr4	131865387	131865515	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	NonProperStrand	15	2	-20.8172
chr5	110535957	110536092	protein_coding	Gtpbp6	exon	ENSMUSG00000033434	ProperStrand	9	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-7.0004
chr7	13945985	13946001	protein_coding	Pla2g4c	utr3	ENSMUSG00000033847	NonProperStrand	1	chr10	90581034	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-inf
chr14	25312606	25312706	protein_coding	Rps24	exon	ENSMUSG00000025290	ProperStrand	110	chr18	33954874	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-2.4306
chr14	51463983	51463999	protein_coding	Tep1	exon	ENSMUSG00000006281	NonProperStrand	73	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-7.3487
chr16	75761550	75765200	protein_coding	Hspa13	exon	ENSMUSG00000032932	NonProperStrand	57	chr17	35299507	35299559	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-4.8762
chr17	27236036	27236052	protein_coding	Itpr3	exon	ENSMUSG00000042644	ProperStrand	137	chr7	52381717	52381760	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-5.9412
chr6	33538401	33538425	protein_coding	Exoc4	intron	ENSMUSG00000029763	NonProperStrand	10	chr16	23111696	23111786	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-8.7017
chr2	129025662	129025732	protein_coding	Slc20a1	exon	ENSMUSG00000027397	ProperStrand	81	chr16	23111756	23111794	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.4475
chr8	126853647	126853693	protein_coding	Gm20388	exon	ENSMUSG00000092329	ProperStrand	295	chr2	22444550	22444602	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	5	-18.2219
chr2	163842967	163843001	protein_coding	Ywhab	utr3	ENSMUSG00000018326	ProperStrand	33	chr17	87835206	87846133	protein_coding	Calm2	exon	ENSMUSG00000036438	ProperStrand	59	1	-14.5450
chr16	17641003	17641064	protein_coding	Smpd4	exon	ENSMUSG00000005899	ProperStrand	33	chr10	63552101	63552119	protein_coding	Lrrtm3	exon	ENSMUSG00000042846	ProperStrand	63	1	-14.4209
chrX	158274965	158274981	protein_coding	Nhs	exon	ENSMUSG00000059493	NonProperStrand	50	chr19	8963027	8963083	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.5849
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr13	21872301	21872378	protein_coding	Hist1h1b	exon	ENSMUSG00000058773	ProperStrand	65	1	-8.6792
chr17	24665420	24665457	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	chr9	64023696	64023746	snoRNA	ENSMUSG00000064918_SNORD18	.	ENSMUSG00000064918	ProperStrand	370	2	-3.1327
chr3	51275444	51276572	protein_coding	Naa15	exon	ENSMUSG00000063273	ProperStrand	34	chr8	32260364	32260400	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-5.7367
chr15	68012619	68012635	protein_coding	Zfat	exon	ENSMUSG00000022335	NonProperStrand	25	chr18	35714185	35714275	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-8.4517
chr12	89699698	89699714	protein_coding	Adck1	utr3	ENSMUSG00000021044	NonProperStrand	42	chr10	23505151	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.7547
chr1	24621131	24621231	protein_coding	Gm10925	utr3	ENSMUSG00000090378	ProperStrand	320	chr11	77995188	77995244	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	3	-7.6402
chr6	45494576	45494594	protein_coding	Cntnap2	intron	ENSMUSG00000039419	NonProperStrand	283	chr7	29136525	29136601	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-0.8263
chr8	77742558	77742574	protein_coding	Rasd2	exon	ENSMUSG00000034472	NonProperStrand	237	chr7	52382237	52382277	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-5.5681
chr16	11254156	11254193	protein_coding	Gspt1	utr5	ENSMUSG00000062203	ProperStrand	49	chr5	74489596	74489680	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-4.1589
chr16	23111692	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	chr3	88497865	88497980	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	23	-5.7885
chr7	48816507	48816590	protein_coding	Gm6871	intron	ENSMUSG00000090744	NonProperStrand	2	chr7	29136600	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-9.5181
chr7	138704284	138704374	protein_coding	Bub3	exon	ENSMUSG00000066979	ProperStrand	24	chrX	34622956	34623036	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-4.9020
chr16	38369597	38369614	protein_coding	Popdc2	exon	ENSMUSG00000022803	ProperStrand	19	chr11	116938559	116938649	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-8.4659
chr3	85945208	85945298	protein_coding	Rps3a	exon	ENSMUSG00000028081	ProperStrand	177	chr2	130102006	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-3.3112
chr6	48691370	48691386	protein_coding	Gimap1	utr5	ENSMUSG00000090019	ProperStrand	4	chr17	35089181	35089232	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-11.1133
chr1	89673651	89673731	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	chr1	59761626	59761717	snoRNA	ENSMUSG00000089093_Snord11	.	ENSMUSG00000089093	ProperStrand	193	1	-1.3452
chr2	172957825	172957841	antisense	1300015D01Rik	.	ENSMUSG00000087382	ProperStrand	34	chr12	106269284	106269384	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	3	-12.3250
chr17	87834501	87834990	protein_coding	Calm2	exon	ENSMUSG00000036438	ProperStrand	59	chr11	77996558	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	23	-19.4975
chr13	49685588	49685605	protein_coding	Omd	exon	ENSMUSG00000048368	ProperStrand	3	chr10	23505152	23505258	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-inf
chr12	70413651	70415416	protein_coding	Nemf	exon	ENSMUSG00000020982	ProperStrand	77	chr14	52829462	52829479	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-7.7040
chr8	112363199	112363225	snoRNA	ENSMUSG00000077549_Snord71	.	ENSMUSG00000077549	ProperStrand	196	chr7	118219632	118219722	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	5	-10.0844
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr17	68164289	68164308	protein_coding	Lama1	intron	ENSMUSG00000032796	ProperStrand	168	3	-7.6965
chr7	52960593	52960668	protein_coding	Dbp	utr5	ENSMUSG00000059824	ProperStrand	3	chr7	116663634	116663724	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-14.5479
chr18	35063403	35063430	protein_coding	Etf1	utr3	ENSMUSG00000024360	ProperStrand	74	chr10	23505152	23505208	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-0.9610
chr11	78189697	78189716	protein_coding	Foxn1	intron	ENSMUSG00000002057	ProperStrand	1	chr4	138807691	138807709	protein_coding	Capzb	intron	ENSMUSG00000028745	NonProperStrand	21	1	-inf
chr18	35716684	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	chr7	52381719	52381799	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	15	-2.8772
chr11	69812094	69812194	protein_coding	Phf23	exon	ENSMUSG00000018572	ProperStrand	25	chr1	162965984	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	3	-12.4641
chr3	88125503	88125554	protein_coding	Cct3	utr3	ENSMUSG00000001416	ProperStrand	82	chr3	123210854	123210885	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-2.9415
chr17	35379642	35389714	protein_coding	Ddx39b	utr5	ENSMUSG00000019432	ProperStrand	119	chr4	131865868	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-2.7893
chr11	75444696	75446655	protein_coding	Inpp5k	exon	ENSMUSG00000006127	ProperStrand	6	chr5	111079111	111079369	protein_coding	Noc4l	exon	ENSMUSG00000033294	ProperStrand	8	5	-18.4704
chr15	102152761	102152851	protein_coding	Espl1	exon	ENSMUSG00000058290	ProperStrand	172	chr10	110918549	110918629	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-1.6619
chr8	107887275	107888611	protein_coding	Slc9a5	exon	ENSMUSG00000014786	ProperStrand	26	chr1	162966000	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	6	-inf
chr5	145532346	145532381	protein_coding	Trrap	intron	ENSMUSG00000045482	ProperStrand	399	chr1	181027187	181027205	protein_coding	Smyd3	intron	ENSMUSG00000055067	ProperStrand	231	1	-6.8332
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr8	97386718	97387354	protein_coding	Polr2c	exon	ENSMUSG00000031783	ProperStrand	16	1	-9.6978
chr3	9435789	9435879	protein_coding	Zfp704	utr3	ENSMUSG00000040209	ProperStrand	67	chr9	120039540	120039620	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.1188
chr15	12066328	12066352	protein_coding	Zfr	exon	ENSMUSG00000022201	ProperStrand	48	chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	1	-9.5133
chr16	20655337	20655393	protein_coding	Psmd2	exon	ENSMUSG00000006998	ProperStrand	99	chr16	19883898	19883914	protein_coding	A930003A15Rik	exon	ENSMUSG00000075330	ProperStrand	93	1	-11.4263
chr11	102060738	102060754	protein_coding	Hdac5	exon	ENSMUSG00000008855	NonProperStrand	39	chr2	130101971	130102034	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-6.2038
chr9	42680428	42680508	protein_coding	Grik4	intron	ENSMUSG00000032017	NonProperStrand	14	chr17	68717425	68717515	protein_coding	L3mbtl4	intron	ENSMUSG00000041565	NonProperStrand	4	1	-inf
chr11	103511201	103511218	protein_coding	Rprml	exon	ENSMUSG00000046215	ProperStrand	16	chr16	23110874	23110938	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.9771
chr16	17499557	17499622	protein_coding	Aifm3	intron	ENSMUSG00000022763	ProperStrand	10	chr17	36097663	36097764	protein_coding	Abcf1	exon	ENSMUSG00000038762	ProperStrand	206	1	-14.5117
chr8	95701420	95701510	protein_coding	Ces1d	intron	ENSMUSG00000056973	NonProperStrand	2	chr4	113616240	113616330	protein_coding	Skint5	intron	ENSMUSG00000078598	NonProperStrand	4	1	-inf
chr2	105660946	105661036	protein_coding	Elp4	intron	ENSMUSG00000027167	ProperStrand	11	chr11	97642994	97643074	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-5.6855
chr3	60433442	60433542	protein_coding	Mbnl1	utr3	ENSMUSG00000027763	ProperStrand	9	chr16	23111389	23111466	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.5836
chr2	155998622	155998712	protein_coding	Rbm39	exon	ENSMUSG00000027620	ProperStrand	38	chr5	130300473	130300553	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	4	-11.3134
chr7	87439400	87439440	protein_coding	Prc1	utr5	ENSMUSG00000038943	ProperStrand	35	chr12	86261046	86261079	protein_coding	1110018G07Rik	utr3	ENSMUSG00000042350	ProperStrand	13	1	-17.5535
chr2	143373719	143373736	protein_coding	Pcsk2	intron	ENSMUSG00000027419	ProperStrand	16	chr3	135268102	135268121	protein_coding	Nfkb1	exon	ENSMUSG00000028163	ProperStrand	55	1	-16.1588
chr1	89611880	89614346	protein_coding	Inpp5d	exon	ENSMUSG00000026288	ProperStrand	75	chr14	31827476	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-6.5025
chr19	4286520	4286596	protein_coding	Adrbk1	utr3	ENSMUSG00000024858	ProperStrand	37	chr16	49018625	49018680	protein_coding	C330027C09Rik	utr3	ENSMUSG00000033031	ProperStrand	30	3	-inf
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr15	98350253	98350270	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-0.8540
chr12	21326440	21326521	protein_coding	Iah1	intron	ENSMUSG00000062054	ProperStrand	6	chr4	131908236	131908286	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-13.9358
chr15	77599717	77599968	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr3	133031676	133031720	protein_coding	Ppa2	intron	ENSMUSG00000028013	ProperStrand	11	1	-12.2691
chr6	47748389	47748479	protein_coding	Pdia4	exon	ENSMUSG00000025823	ProperStrand	41	chr2	153067392	153069384	protein_coding	Pofut1	exon	ENSMUSG00000046020	ProperStrand	17	1	-16.6640
chr4	155033312	155033518	protein_coding	Mib2	exon	ENSMUSG00000029060	ProperStrand	21	chr8	87548208	87549077	protein_coding	Asna1	exon	ENSMUSG00000052456	ProperStrand	25	1	-17.1101
chr12	85075760	85075810	protein_coding	Psen1	utr3	ENSMUSG00000019969	ProperStrand	20	chr7	116664811	116664901	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-4.5800
chr11	25155567	25155585	LINE	Lx9	L1	chr11Lx925155282	ProperStrand	1	chr5	116457214	116457242	protein_coding	Cit	utr3	ENSMUSG00000029516	ProperStrand	45	1	-inf
chr7	52717138	52717169	protein_coding	Bax	utr3	ENSMUSG00000003873	ProperStrand	24	chr3	96527779	96527847	protein_coding	Polr3c	exon	ENSMUSG00000028099	ProperStrand	16	2	-20.5607
chr2	167308789	167308851	protein_coding	Spata2	utr3	ENSMUSG00000047030	ProperStrand	9	chr7	117189961	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-7.0617
chr1	155086430	155086459	protein_coding	Lamc1	exon	ENSMUSG00000026478	ProperStrand	239	chr11	5180669	5180685	protein_coding	Znrf3	utr3	ENSMUSG00000041961	NonProperStrand	210	1	-8.0367
chr2	118611946	118611962	protein_coding	Disp2	exon	ENSMUSG00000040035	NonProperStrand	204	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-3.5072
chr1	36758698	36758929	protein_coding	Actr1b	exon	ENSMUSG00000037351	ProperStrand	14	chr10	23505152	23505259	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-9.3303
chr6	72388906	72388923	protein_coding	Mat2a	intron	ENSMUSG00000053907	ProperStrand	51	chr7	116663634	116663705	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.7941
chr11	69481335	69481433	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	chr5	147646720	147646848	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	5	-1.1357
chr2	26774764	26774865	protein_coding	Surf2	exon	ENSMUSG00000014873	ProperStrand	12	chr8	73419707	73419767	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	6	-inf
chr16	30514154	30514171	protein_coding	Tmem44	utr3	ENSMUSG00000022537	ProperStrand	217	chr11	6428089	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.1326
chr15	99542591	99542681	protein_coding	Smarcd1	exon	ENSMUSG00000023018	ProperStrand	43	chr1	129292052	129292132	protein_coding	Mgat5	intron	ENSMUSG00000036155	ProperStrand	33	1	-15.1950
chr1	136322544	136322578	protein_coding	Adipor1	exon	ENSMUSG00000026457	ProperStrand	48	chr11	77995189	77995240	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	2	-10.7079
chr12	17552961	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr17	24856620	24856716	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	6	-2.5324
chr12	110881637	110881703	lincRNA	Rian	intron	ENSMUSG00000091793	ProperStrand	612	chr11	80965641	80965658	protein_coding	Accn1	exon	ENSMUSG00000020704	NonProperStrand	228	1	-6.0190
chr9	57435425	57435441	protein_coding	Scamp2	utr3	ENSMUSG00000040188	NonProperStrand	16	chr7	52382014	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-9.3785
chr2	94182399	94182440	protein_coding	Ttc17	intron	ENSMUSG00000027194	ProperStrand	13	chr4	131866187	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	3	-15.4258
chr1	182827674	182827774	protein_coding	Lefty2	exon	ENSMUSG00000066652	ProperStrand	48	chr17	13112470	13112528	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-5.0103
chr5	32657192	32657208	protein_coding	Plb1	exon	ENSMUSG00000029134	ProperStrand	50	chr17	24857716	24857795	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.6076
chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	chr8	125627175	125627206	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	1	-6.5876
chr12	110888803	110888903	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr9	63868722	63868739	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	1	-4.0457
chr2	121361495	121361585	protein_coding	Wdr76	intron	ENSMUSG00000027242	ProperStrand	25	chr11	69481393	69481473	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-4.8537
chr14	87912387	87912403	protein_coding	Tdrd3	utr3	ENSMUSG00000022019	NonProperStrand	46	chr7	29136525	29136586	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.8242
chr2	26767043	26767580	protein_coding	Rpl7a	exon	ENSMUSG00000062647	ProperStrand	234	chr2	26494716	26494796	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-0.9762
chr13	70742128	70742218	protein_coding	BC018507	exon	ENSMUSG00000034525	ProperStrand	43	chr4	131865904	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.3073
chr2	28422366	28422382	protein_coding	Gtf3c5	utr3	ENSMUSG00000026816	ProperStrand	11	chr15	79913286	79913345	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	3	-16.0454
chr18	35716707	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	chr8	113362430	113362512	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	5	-1.2938
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	69002198	69002214	protein_coding	Alox8	exon	ENSMUSG00000020891	NonProperStrand	31	2	-9.4030
chr13	21871882	21871982	protein_coding	Hist1h1b	exon	ENSMUSG00000058773	ProperStrand	65	chr1	162966010	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-5.8908
chr3	130432215	130433247	protein_coding	Rpl34	utr5	ENSMUSG00000062006	ProperStrand	51	chr7	116663711	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.7941
chr9	21602970	21602986	protein_coding	Kank2	utr5	ENSMUSG00000032194	ProperStrand	196	chr17	39985501	39985522	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-3.6651
chr15	99538341	99539721	protein_coding	Smarcd1	exon	ENSMUSG00000023018	ProperStrand	43	chr1	162965996	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-7.0852
chr17	27891464	27891558	protein_coding	D17Wsu92e	intron	ENSMUSG00000056692	ProperStrand	61	chr18	59490475	59490492	protein_coding	Chsy3	intron	ENSMUSG00000058152	ProperStrand	35	2	-20.1683
chr4	112929378	112929396	protein_coding	Skint6	intron	ENSMUSG00000087194	NonProperStrand	35	chr19	8798484	8798537	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-6.2716
chr15	77597977	77597993	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr8	72287172	72287188	protein_coding	Zfp866	utr3	ENSMUSG00000043090	NonProperStrand	134	1	-7.2060
chr10	122588196	122588249	protein_coding	Usp15	intron	ENSMUSG00000020124	ProperStrand	24	chr4	131908689	131908750	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.6746
chr11	69483231	69483369	protein_coding-noncoding	Eif4a1	utr3	ENSMUSG00000059796	ProperStrand	68	chr11	69483141	69483284	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	12	-21.0415
chr3	99003133	99003155	protein_coding	Wars2	intron	ENSMUSG00000004233	NonProperStrand	48	chr8	32260334	32260424	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	5	-18.9370
chr10	87716461	87716541	LINE	Lx7	L1	chr10Lx787715987	ProperStrand	1	chr10	86169669	86169759	protein_coding	BC030307	intron	ENSMUSG00000044937	ProperStrand	77	1	-inf
chr4	120493039	120493094	protein_coding	Nfyc	intron	ENSMUSG00000032897	ProperStrand	4	chr9	15119733	15119969	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-8.0470
chr9	120037898	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	chr11	62418014	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	13	-4.3598
chr6	134780323	134780339	protein_coding	Crebl2	utr5	ENSMUSG00000032652	ProperStrand	41	chr5	145532342	145532393	protein_coding	Trrap	intron	ENSMUSG00000045482	ProperStrand	399	1	-10.2854
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr11	88834148	88834165	protein_coding	Coil	utr5	ENSMUSG00000033983	ProperStrand	9	1	-11.6738
chr16	32473797	32473897	protein_coding	Pcyt1a	utr3	ENSMUSG00000005615	ProperStrand	7	chr15	34370544	34370576	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-7.8301
chr10	127683154	127688885	protein_coding	Timeless	exon	ENSMUSG00000039994	ProperStrand	53	chr11	6428068	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	6	-17.9257
chr11	79767138	79769169	protein_coding	Utp6	exon	ENSMUSG00000035575	ProperStrand	28	chr7	116664851	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.9326
chr13	38597660	38597740	protein_coding-noncoding	Txndc5	utr3	ENSMUSG00000038991	ProperStrand	1	chr4	131865427	131865856	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-inf
chr7	20350741	20350785	protein_coding	Bcam	exon	ENSMUSG00000002980	ProperStrand	43	chr4	124477057	124477075	protein_coding	Inpp5b	exon	ENSMUSG00000028894	ProperStrand	9	1	-17.9984
chr2	105767586	105767672	protein_coding	Immp1l	intron	ENSMUSG00000042670	ProperStrand	3	chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	3	-inf
chr2	144649688	144649768	protein_coding	1700010M22Rik	exon	ENSMUSG00000027431	ProperStrand	1	chr5	17856674	17856765	protein_coding	Gnai1	intron	ENSMUSG00000057614	NonProperStrand	1	1	-inf
chr8	123157806	123157824	protein_coding	1190005I06Rik	intron	ENSMUSG00000043687	ProperStrand	3	chr17	36000485	36000501	protein_coding	Nrm	exon	ENSMUSG00000059791	ProperStrand	253	1	-16.8120
chr17	83878316	83878403	protein_coding	Eml4	utr3	ENSMUSG00000032624	ProperStrand	50	chr17	24857802	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-4.5845
chr2	4532901	4532981	protein_coding	Frmd4a	utr3	ENSMUSG00000026657	ProperStrand	44	chr9	78327829	78327882	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	8	-inf
chr8	13189650	13189666	protein_coding	Grtp1	exon	ENSMUSG00000038515	NonProperStrand	12	chr4	86232356	86232479	snoRNA	ENSMUSG00000088958_Scarna8	.	ENSMUSG00000088958	ProperStrand	366	3	-19.8923
chr13	62644617	62644697	snoRNA	ENSMUSG00000075946_SNORA25	.	ENSMUSG00000075946	ProperStrand	11	chr16	23110829	23110919	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.6241
chr14	71101541	71101589	protein_coding	Xpo7	exon	ENSMUSG00000022100	ProperStrand	109	chr15	79913288	79913334	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.5265
mmu-miR-291a-3p	1	22	miRNA	mmu-miR-291a-3p	.	mmu-miR-291a-3p	ProperStrand	19	chr17	24321453	24321512	protein_coding	Tbc1d24	intron	ENSMUSG00000036473	ProperStrand	5	2	-19.9496
chr10	127521215	127521268	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	chr8	113362431	113362488	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	1	-4.8128
chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	chr5	108334195	108334316	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	3	-3.8498
chr12	114310548	114311501	protein_coding	Pacs2	utr3	ENSMUSG00000021143	ProperStrand	14	chr16	23110861	23110940	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-4.0210
chr14	61412014	61412033	protein_coding	Mipep	intron	ENSMUSG00000021993	NonProperStrand	7	chr16	11144204	11144304	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	1	-14.8847
chr16	38158076	38158192	protein_coding	Gsk3b	intron	ENSMUSG00000022812	ProperStrand	80	chr2	91436310	91436334	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-6.9252
chr11	115659905	115659956	protein_coding	2310067B10Rik	utr3	ENSMUSG00000020747	ProperStrand	74	chr16	23111771	23111836	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-6.4382
chr7	117934846	117934893	protein_coding	Ampd3	intron	ENSMUSG00000005686	ProperStrand	5	chr7	123477283	123477425	protein_coding	Rps13	exon	ENSMUSG00000090862	ProperStrand	36	1	-18.5702
chr4	148761253	148772736	protein_coding	Ube4b	exon	ENSMUSG00000028960	ProperStrand	66	chr2	146125209	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	9	-inf
chr12	117520085	117556303	protein_coding	Esyt2	exon	ENSMUSG00000021171	ProperStrand	19	chr16	23111450	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.1411
chr4	107704452	107704473	protein_coding	Podn	intron	ENSMUSG00000028600	ProperStrand	2	chr2	144087325	144087392	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-13.9887
chr5	93601089	93601156	protein_coding	Sept11	utr3	ENSMUSG00000058013	ProperStrand	79	chr4	131866172	131866217	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-3.1618
chr2	4858761	4858826	protein_coding	Phyh	exon	ENSMUSG00000026664	ProperStrand	8	chr9	78328416	78328471	protein_coding	Eef1a1	utr5	ENSMUSG00000037742	ProperStrand	1990	5	-20.1862
chr2	156653521	156653554	LTR	MMERGLN-int	ERV1	chr2MMERGLN-int156652907	ProperStrand	6	chr2	156657737	156657833	LTR	MMERGLN-int	ERV1	chr2MMERGLN-int156656863	ProperStrand	5	5	-inf
chr10	79617881	79617918	protein_coding	Midn	exon	ENSMUSG00000035621	ProperStrand	36	chr3	123210887	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.9411
chr7	48054381	48054473	Simple_repeat	(GA)n	Simple_repeat	chr7(GA)n48054344	NonProperStrand	2	chr5	108336937	108337017	protein_coding	Rpl5	utr3	ENSMUSG00000058558	ProperStrand	235	2	-inf
chr4	153410349	153410365	protein_coding	Ccdc27	exon	ENSMUSG00000039492	ProperStrand	94	chr19	46836213	46836229	protein_coding	Cnnm2	utr5	ENSMUSG00000064105	NonProperStrand	19	1	-14.7305
chr10	76797236	76797253	protein_coding	Adarb1	intron	ENSMUSG00000020262	ProperStrand	15	chr3	123210915	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-4.5915
chr4	117907621	117907695	protein_coding	Ptprf	exon	ENSMUSG00000033295	ProperStrand	337	chr13	23647397	23647478	protein_coding	Hist1h1d	exon	ENSMUSG00000052565	ProperStrand	78	1	-9.3291
chr2	90235318	90235341	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	24825186	24827046	protein_coding	Wdr85	exon	ENSMUSG00000026975	ProperStrand	323	1	-1.5332
chr11	72262640	72262816	protein_coding	Mybbp1a	exon	ENSMUSG00000040463	NonProperStrand	5	chr4	131866174	131866264	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	NonProperStrand	19	1	-19.2987
chr18	10052130	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr3	88737530	88737568	protein_coding	Dap3	exon	ENSMUSG00000068921	ProperStrand	58	1	-8.8689
chr4	58677514	58677604	LINE	L2b	L2	chr4L2b58677406	ProperStrand	1	chr4	58677298	58677378	SINE	ID_B1	B4	chr4ID_B158677257	NonProperStrand	1	1	-inf
chr8	108054772	108054830	protein_coding	Atp6v0d1	exon	ENSMUSG00000013160	ProperStrand	35	chr5	149100499	149100516	protein_coding	Mtus2	exon	ENSMUSG00000029651	ProperStrand	114	1	-13.1135
chr7	52381536	52382457	protein_coding	Rpl13a	exon	ENSMUSG00000074129	ProperStrand	269	chr10	110918549	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-2.0390
chr6	113118507	113118525	protein_coding	Lhfpl4	utr3	ENSMUSG00000042873	ProperStrand	47	chr7	67125789	67125830	snoRNA	ENSMUSG00000089375_Snord107	.	ENSMUSG00000089375	ProperStrand	451	1	-9.7655
chr18	5063207	5063226	protein_coding	Svil	exon	ENSMUSG00000024236	ProperStrand	19	chr10	23505152	23505267	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-14.1394
chr14	49119709	49119726	protein_coding	6720456H20Rik	exon	ENSMUSG00000036339	NonProperStrand	8	chr4	131865875	131865965	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.4974
chr4	83938840	83938912	protein_coding	Bnc2	exon	ENSMUSG00000028487	ProperStrand	76	chr8	34802316	34802406	snoRNA	ENSMUSG00000088856_SNORA48	.	ENSMUSG00000088856	ProperStrand	236	1	-10.0922
chr19	43575033	43577473	protein_coding	Got1	exon	ENSMUSG00000025190	ProperStrand	32	chr9	15119646	15119726	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.7682
chr18	13149261	13149292	protein_coding	Impact	utr3	ENSMUSG00000024423	ProperStrand	32	chr16	23111763	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-5.1666
chr17	56151759	56151905	protein_coding	Mpnd	exon	ENSMUSG00000003199	ProperStrand	71	chr18	37975151	37975168	protein_coding	Pcdhga9	utr5	ENSMUSG00000023036	ProperStrand	245	1	-10.1541
chr17	39980028	39980118	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr7	52283797	52283813	protein_coding	Prr12	utr3	ENSMUSG00000046574	ProperStrand	86	2	-10.5207
chr18	60976095	60976131	protein_coding	Tcof1	utr3	ENSMUSG00000024613	ProperStrand	68	chr12	118005366	118005382	protein_coding	Ptprn2	intron	ENSMUSG00000056553	NonProperStrand	38	1	-13.9833
chr15	88693864	88693964	protein_coding	Pim3	exon	ENSMUSG00000035828	ProperStrand	66	chr8	73419657	73419682	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.9596
chr2	90235285	90235346	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	8963025	8963204	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	49	-0.9929
chr15	36528046	36528744	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr11	62418012	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-0.9121
chr1	134465558	134465574	protein_coding	Nfasc	utr3	ENSMUSG00000026442	NonProperStrand	48	chr5	134760403	134760455	protein_coding	Gtf2i	intron	ENSMUSG00000060261	ProperStrand	41	1	-14.5338
chr15	61895528	61895618	lincRNA	Pvt1	intron	ENSMUSG00000072566	NonProperStrand	9	chr2	166279112	166279202	lincRNA	5031425F14Rik	intron	ENSMUSG00000085129	NonProperStrand	1	1	-inf
chr15	88653886	88653905	protein_coding	Creld2	intron	ENSMUSG00000023272	ProperStrand	8	chr4	131865866	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.4974
chr7	109149271	109149287	protein_coding	Numa1	exon	ENSMUSG00000066306	NonProperStrand	171	chr11	55296276	55296335	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-4.1553
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr1	193801431	193801447	protein_coding	Rd3	utr5	ENSMUSG00000049353	ProperStrand	5	1	-13.7539
chr11	40563230	40563322	protein_coding	Ccng1	utr3	ENSMUSG00000020326	ProperStrand	30	chr11	48616643	48616689	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	3	-inf
chr18	35834421	35834521	protein_coding	Dnajc18	utr3	ENSMUSG00000024350	ProperStrand	4	chr1	162966828	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-11.9060
chr16	33959142	33959232	protein_coding	Umps	exon	ENSMUSG00000022814	ProperStrand	20	chr7	117189975	117190055	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-5.4343
chr2	160191558	160191574	protein_coding	Mafb	exon	ENSMUSG00000074622	ProperStrand	31	chr11	69483136	69483264	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.6332
chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	chr4	149353999	149354066	protein_coding	H6pd	utr3	ENSMUSG00000028980	ProperStrand	14	1	-11.4623
chr1	16595423	16595523	protein_coding	Ube2w	intron	ENSMUSG00000025939	ProperStrand	6	chr1	162967494	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-8.0824
chr2	128492359	128492375	protein_coding	Anapc1	exon	ENSMUSG00000014355	ProperStrand	38	chr10	110918550	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-4.3053
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	4	-3.1698
chr12	111874577	111874667	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr7	89110591	89110671	snoRNA	ENSMUSG00000089111_SNORA74	.	ENSMUSG00000089111	ProperStrand	7	1	-12.9746
chr13	58277689	58277715	protein_coding	Ubqln1	utr3	ENSMUSG00000005312	ProperStrand	49	chr9	120039540	120039630	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.6918
chr7	4095687	4098890	protein_coding	Leng8	utr3	ENSMUSG00000035545	ProperStrand	49	chr16	23110988	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.1188
chr2	32087522	32087612	protein_coding	Prrc2b	utr3	ENSMUSG00000039262	ProperStrand	344	chr17	35299554	35299634	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-1.6855
chr1	165884304	165884404	protein_coding	BC055324	exon	ENSMUSG00000041406	ProperStrand	35	chr19	8799831	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-6.0025
chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	chr3	108357368	108357426	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-1.2698
chr2	90235286	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	38012954	38012970	protein_coding	Dennd1a	intron	ENSMUSG00000035392	NonProperStrand	128	2	-5.2666
chr19	46836213	46836229	protein_coding	Cnnm2	utr5	ENSMUSG00000064105	NonProperStrand	19	chr9	120038531	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-8.6373
chr18	57514443	57514498	protein_coding	Prrc1	utr5	ENSMUSG00000024594	NonProperStrand	22	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-8.5734
chr7	52381972	52382034	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	chr3	88497854	88497945	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	11	-20.4841
chr4	134479844	134479860	protein_coding	D4Wsu53e	exon	ENSMUSG00000037266	NonProperStrand	50	chr6	52589226	52589266	snoRNA	ENSMUSG00000064792_SNORA32	.	ENSMUSG00000064792	ProperStrand	151	2	-18.4202
chr6	7627306	7627949	protein_coding	Asns	exon	ENSMUSG00000029752	ProperStrand	59	chr11	69481335	69481412	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-5.5471
chr1	127491938	127491955	protein_coding	Slc35f5	utr3	ENSMUSG00000026342	ProperStrand	70	chrX	40944841	40944857	protein_coding	Gm362	exon	ENSMUSG00000078320	ProperStrand	129	1	-11.4670
chr10	79167278	79171443	protein_coding	Bsg	exon	ENSMUSG00000023175	ProperStrand	107	chr16	23111734	23111824	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.0672
chr15	100236193	100236767	protein_coding	Slc11a2	exon	ENSMUSG00000023030	ProperStrand	12	chr1	162967546	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	4	-19.7487
chr17	79320979	79321058	protein_coding	Cebpz	exon	ENSMUSG00000024081	ProperStrand	14	chr1	162966253	162966269	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-10.5275
chr9	45203599	45203699	protein_coding	Fxyd6	utr3	ENSMUSG00000066705	ProperStrand	30	chr19	8963105	8963175	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.5028
chr18	55137233	55137250	protein_coding	Zfp608	intron	ENSMUSG00000052713	ProperStrand	6	chr1	88247803	88247840	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-9.7984
chr3	101181111	101181730	protein_coding	Igsf3	utr5	ENSMUSG00000042035	ProperStrand	73	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-4.8206
chr1	15809607	15809649	protein_coding	Terf1	intron	ENSMUSG00000025925	ProperStrand	19	chr18	35714194	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	4	-17.6128
chr15	10504979	10504995	protein_coding	Rai14	exon	ENSMUSG00000022246	ProperStrand	180	chr8	32260335	32260424	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-2.6137
chr8	109536097	109536189	protein_coding	Sntb2	utr3	ENSMUSG00000041308	ProperStrand	41	chr19	8798773	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-5.5423
chr17	24856747	24856793	antisense	Snhg9	.	ENSMUSG00000090101	ProperStrand	218	chr14	56340696	56340712	protein_coding	Rabggta	utr5	ENSMUSG00000040472	NonProperStrand	4	1	-16.4436
chr3	10316134	10316180	protein_coding	Impa1	exon	ENSMUSG00000027531	ProperStrand	11	chr3	123210924	123210970	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.2109
chrX	34667269	34667285	protein_coding	Nkap	exon	ENSMUSG00000016409	NonProperStrand	133	chr7	52381749	52381805	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-5.9992
chr19	43579408	43579425	protein_coding	Got1	intron	ENSMUSG00000025190	NonProperStrand	147	chr15	80770084	80770103	protein_coding	Tnrc6b	utr3	ENSMUSG00000047888	ProperStrand	59	1	-11.5486
chr16	55843474	55843492	protein_coding	Fam55c	utr3	ENSMUSG00000075033	ProperStrand	5	chr10	110918597	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-8.4568
chr16	32278132	32278148	protein_coding	Rnf168	utr5	ENSMUSG00000014074	ProperStrand	7	chr1	162965531	162965547	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-7.5326
chr17	35651423	35651475	protein_coding	Tcf19	exon	ENSMUSG00000050410	NonProperStrand	17	chr16	23110901	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.8783
chr7	28146782	28146798	protein_coding	Spnb4	exon	ENSMUSG00000011751	NonProperStrand	84	chr19	8800360	8800450	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-2.9213
chr7	11311317	11314912	protein_coding	Nlrp4b	exon	ENSMUSG00000034087	ProperStrand	14	chr5	130300460	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-12.5332
chr17	39985128	39985153	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr3	85942723	85942780	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	1	-2.5751
chr7	52975731	52975820	protein_coding	Rpl18	exon	ENSMUSG00000059070	ProperStrand	116	chr4	131865913	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-4.1894
chr5	74489542	74489563	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr12	81492597	81492659	snoRNA	ENSMUSG00000088158_Scarna3b	.	ENSMUSG00000088158	ProperStrand	147	3	-9.5143
chr4	133088487	133089215	protein_coding	Nudc	utr3	ENSMUSG00000028851	ProperStrand	80	chr16	23111764	23111837	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	11	-19.4001
chr4	131908410	131908467	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr8	32260350	32260440	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	6	-3.3103
chr15	84771442	84771526	protein_coding	Nup50	utr3	ENSMUSG00000016619	ProperStrand	39	chr11	97642978	97643068	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.2331
chr4	118108169	118108221	protein_coding	Cdc20	exon	ENSMUSG00000006398	ProperStrand	43	chr3	123210858	123210948	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-4.6204
chr5	114221351	114221451	protein_coding	Sart3	exon	ENSMUSG00000018974	ProperStrand	50	chr1	162967491	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-3.8126
chr4	128782868	128782885	protein_coding	Tmem54	utr5	ENSMUSG00000028786	ProperStrand	2	chr4	132978855	132978914	protein_coding	Slc9a1	utr3	ENSMUSG00000028854	ProperStrand	28	2	-inf
chr3	93250306	93250322	protein_coding	Tchh	exon	ENSMUSG00000052415	ProperStrand	26	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-7.5077
chr1	74299683	74299773	protein_coding	Arpc2	intron	ENSMUSG00000006304	ProperStrand	16	chr3	31105259	31105339	protein_coding	Slc7a14	utr3	ENSMUSG00000069072	NonProperStrand	7	1	-inf
chr7	20287038	20287098	protein_coding	Tomm40	utr3	ENSMUSG00000002984	ProperStrand	57	chr6	125111936	125112023	protein_coding	Gapdh	utr3	ENSMUSG00000057666	ProperStrand	356	1	-9.8492
chr8	73119738	73119849	protein_coding	Isyna1	exon	ENSMUSG00000019139	ProperStrand	15	chr7	116663633	116663710	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-5.1056
chr1	7140866	7140925	protein_coding	Pcmtd1	intron	ENSMUSG00000051285	ProperStrand	19	chr1	168931786	168931803	protein_coding	Fam78b	exon	ENSMUSG00000060568	ProperStrand	8	1	-18.8166
chr7	4746076	4746124	protein_coding	Rpl28	utr3	ENSMUSG00000030432	ProperStrand	220	chr8	13876097	13876187	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	7	-inf
chr11	100414998	100415014	protein_coding	Ttc25	exon	ENSMUSG00000006784	NonProperStrand	119	chr14	76245193	76245232	protein_coding	Tpt1	utr5	ENSMUSG00000060126	ProperStrand	236	1	-9.1941
chr5	112865459	112865476	protein_coding	Sez6l	exon	ENSMUSG00000058153	ProperStrand	81	chr19	8963052	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.7905
chr5	65952377	65952395	protein_coding	Ube2k	intron	ENSMUSG00000029203	ProperStrand	289	chr15	79908931	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-2.5520
chr8	24169016	24169032	protein_coding	Ank1	utr5	ENSMUSG00000031543	ProperStrand	47	chr5	111121065	111121151	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	2	-11.1528
chr9	106385288	106385311	protein_coding	Rrp9	exon	ENSMUSG00000041506	ProperStrand	32	chr16	23110964	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.9664
chr15	102301401	102301418	lincRNA	Gm17403	intron	ENSMUSG00000090630	ProperStrand	1	chr13	95223812	95223828	protein_coding	Ap3b1	intron	ENSMUSG00000021686	NonProperStrand	24	1	-inf
chr19	56464462	56464479	protein_coding	Nrap	utr5	ENSMUSG00000049134	ProperStrand	32	chr15	82980115	82980174	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-8.3988
chr2	90235314	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	4564728	4564744	protein_coding	Prpf18	exon	ENSMUSG00000039449	ProperStrand	16	1	-7.0757
chr4	11440193	11461456	protein_coding	1110037F02Rik	exon	ENSMUSG00000040720	ProperStrand	32	chr16	23111390	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	7	-16.4715
chr12	88609165	88609208	protein_coding	Ahsa1	exon	ENSMUSG00000021037	ProperStrand	58	chr5	130300456	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.5677
chr17	34054513	34054613	protein_coding	Zbtb22	exon	ENSMUSG00000051390	ProperStrand	7	chr19	8798741	8798813	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-9.1562
chr17	34472788	34472804	protein_coding	H2-Eb2	exon	ENSMUSG00000067341	NonProperStrand	17	chr3	123210910	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-4.3464
chr7	36366044	36366061	protein_coding	Rgs9bp	utr3	ENSMUSG00000056043	ProperStrand	12	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-9.8516
chr9	78550960	78550977	protein_coding	Cd109	exon	ENSMUSG00000046186	NonProperStrand	36	chr3	108357255	108357350	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	2	-9.0699
chr9	62659085	62659185	protein_coding	Fem1b	utr5	ENSMUSG00000032244	ProperStrand	111	chr1	162968226	162968289	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-5.6055
chr4	155323707	155323807	protein_coding	Ube2j2	intron	ENSMUSG00000023286	ProperStrand	35	chr9	15130702	15130737	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	1	-10.2995
chr12	17372056	17372146	protein_coding	Nol10	intron	ENSMUSG00000061458	ProperStrand	31	chr16	23111777	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-5.2566
chr19	9018593	9020258	protein_coding	Mta2	exon	ENSMUSG00000071646	ProperStrand	70	chr11	6428101	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.9161
chr10	40791279	40791295	protein_coding	Gpr6	exon	ENSMUSG00000046922	ProperStrand	26	chr4	131865855	131865922	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-5.5201
chr15	99236587	99237054	protein_coding	Tmbim6	exon	ENSMUSG00000023010	ProperStrand	64	chr2	26768051	26768076	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	1	-8.2644
chr2	157817643	157834045	protein_coding	Tti1	intron	ENSMUSG00000027650	ProperStrand	17	chr7	29136614	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-7.8453
chr7	35015149	35015239	protein_coding	Gpi1	utr5	ENSMUSG00000036427	ProperStrand	288	chr9	15119646	15119726	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	5	-3.8837
chr6	146554676	146554694	protein_coding	Tm7sf3	exon	ENSMUSG00000040234	ProperStrand	43	chr5	108336363	108336412	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-5.5297
chr18	62713613	62713633	protein_coding	Spink10	intron	ENSMUSG00000044176	ProperStrand	5	chr11	6428076	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	NonProperStrand	91	2	-19.2994
chr19	32832264	32832329	protein_coding	Pten	utr5	ENSMUSG00000013663	ProperStrand	20	chr19	8963053	8963153	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.2716
chr11	62418013	62418034	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr19	8800088	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-3.4186
chr7	128095444	128095534	LINE	L1M3e	L1	chr7L1M3e128095323	ProperStrand	1	chr7	128095208	128095298	SINE	B3	B2	chr7B3128095130	ProperStrand	1	1	-inf
chr3	27405578	27405658	protein_coding	Fndc3b	intron	ENSMUSG00000039286	ProperStrand	31	chr16	23110868	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	7	-10.5105
chr19	9081279	9085328	protein_coding	Ahnak	exon	ENSMUSG00000069833	ProperStrand	103	chr8	73419649	73419747	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-3.9231
chr10	88225598	88225661	protein_coding	Utp20	exon	ENSMUSG00000004356	ProperStrand	45	chr9	64022854	64022878	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-8.6021
chr13	14047045	14047064	protein_coding	B3galnt2	utr5	ENSMUSG00000039242	ProperStrand	6	chr19	41660375	41660520	protein_coding	Gm340	exon	ENSMUSG00000090673	ProperStrand	19	2	-19.4080
chr5	33322105	33322166	protein_coding	Depdc5	exon	ENSMUSG00000037426	ProperStrand	26	chr7	52382753	52382817	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-8.4281
chr8	71425152	71426236	protein_coding	Lpl	exon	ENSMUSG00000015568	ProperStrand	11	chr17	24342577	24342596	protein_coding	Ntn3	utr3	ENSMUSG00000079662	ProperStrand	237	1	-14.0271
chr5	137254473	137254491	protein_coding	Emid2	intron	ENSMUSG00000004415	NonProperStrand	38	chr11	106362639	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-8.3192
chr2	32817607	32819540	protein_coding	Rpl12	exon	ENSMUSG00000038900	ProperStrand	167	chr8	98269958	98270076	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	2	-6.0854
chr5	34560357	34577028	protein_coding	Zfyve28	exon	ENSMUSG00000037224	ProperStrand	3	chr16	23111693	23111789	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-13.4294
chr17	35196845	35196885	protein_coding	Ddah2	utr5	ENSMUSG00000007039	ProperStrand	23	chr16	4614816	4614906	protein_coding	Glis2	utr3	ENSMUSG00000014303	ProperStrand	15	1	-17.8830
chr4	122973053	122973143	protein_coding	Pabpc4	intron	ENSMUSG00000011257	ProperStrand	85	chr17	32491438	32491477	protein_coding	Wiz	utr3	ENSMUSG00000024050	ProperStrand	26	6	-19.3324
chr2	52991803	52991859	protein_coding	Fmnl2	utr3	ENSMUSG00000036053	ProperStrand	35	chr9	120039568	120039658	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-4.3274
chr3	19925900	19929001	protein_coding	Hps3	exon	ENSMUSG00000027615	ProperStrand	4	chr10	23505165	23505255	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-inf
chr8	125418803	125418819	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	chr3	96132450	96132514	snRNA	ENSMUSG00000075978_U1	.	ENSMUSG00000075978	ProperStrand	132	1	-8.0391
chr2	180519152	180519242	LINE	L1MEg	L1	chr2L1MEg180519142	ProperStrand	1	chr2	180519021	180519111	SINE	B1_Mur4	Alu	chr2B1_Mur4180518998	ProperStrand	1	1	-inf
chr13	49218439	49218455	protein_coding	Wnk2	intron	ENSMUSG00000037989	NonProperStrand	67	chrX	135771752	135771769	protein_coding	Mum1l1	utr3	ENSMUSG00000042515	ProperStrand	21	1	-15.2069
chrX	71196643	71198856	protein_coding	Hcfc1	exon	ENSMUSG00000031386	ProperStrand	424	chrX	34622906	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	13	-15.8934
chr14	117774481	117774498	protein_coding	Gpc6	intron	ENSMUSG00000058571	NonProperStrand	31	chr11	98878342	98878467	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	2	-12.1949
chr2	167306708	167306724	protein_coding	Spata2	utr3	ENSMUSG00000047030	NonProperStrand	6	chr8	98269956	98270073	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	2	-16.3791
chr4	56850711	56851874	protein_coding	Ctnnal1	exon	ENSMUSG00000038816	ProperStrand	18	chr19	8963027	8963080	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	4	-14.5687
chr14	27199812	27199828	antisense	4933413J09Rik	.	ENSMUSG00000021874	ProperStrand	51	chr10	23505236	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.4625
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr2	164630656	164630674	protein_coding	Zswim3	utr5	ENSMUSG00000045822	NonProperStrand	16	1	-8.5577
chr14	19102827	19102853	protein_coding	Rpl15	exon	ENSMUSG00000012405	ProperStrand	145	chr3	97030969	97030986	protein_coding	Bcl9	intron	ENSMUSG00000038256	ProperStrand	94	1	-10.6398
chr11	100569926	100569944	protein_coding	Kat2a	exon	ENSMUSG00000020918	ProperStrand	68	chr6	38099590	38099680	protein_coding	D630045J12Rik	exon	ENSMUSG00000063455	ProperStrand	22	4	-19.7894
chr18	75127227	75127244	LINE	L2b	L2	chr18L2b75127181	ProperStrand	19	chr4	130305550	130305603	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	1	-12.2414
chr14	71088067	71090818	protein_coding	Xpo7	exon	ENSMUSG00000022100	ProperStrand	109	chr10	39978339	39978419	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-4.3095
chr12	92811869	92811909	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	chr5	74489599	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	5	-3.2011
chr6	119304190	119304256	protein_coding	Adipor2	utr3	ENSMUSG00000030168	ProperStrand	79	chr13	21262113	21262159	tRNA	tRNA63-LeuAAG	.	1007094	ProperStrand	21	3	-19.8669
chr2	70927899	70927915	protein_coding	Dcaf17	exon	ENSMUSG00000041966	NonProperStrand	89	chr15	57978221	57978258	snoRNA	ENSMUSG00000080461_SNORA11	.	ENSMUSG00000080461	ProperStrand	171	1	-10.4195
chr6	122685444	122685460	protein_coding	Slc2a3	exon	ENSMUSG00000003153	ProperStrand	682	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	1	-2.4416
chr4	53015201	53015217	SINE	B1F1	Alu	chr4B1F153015138	ProperStrand	102	chr16	90221013	90221054	protein_coding	Sod1	utr5	ENSMUSG00000022982	ProperStrand	75	1	-11.7987
chr5	74489202	74489262	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr2	63021443	63021459	protein_coding	Kcnh7	intron	ENSMUSG00000059742	NonProperStrand	5	1	-10.7442
chr16	37777391	37777408	protein_coding	Fstl1	exon	ENSMUSG00000022816	ProperStrand	179	chr5	24079412	24079502	protein_coding	Abcf2	exon	ENSMUSG00000028953	ProperStrand	50	1	-11.4875
chrX	103281723	103281795	protein_coding	Atp7a	exon	ENSMUSG00000033792	ProperStrand	3	chr19	8800424	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-9.7434
chr19	44188368	44188458	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr1	182733315	182740306	protein_coding	H3f3a	exon	ENSMUSG00000060743	ProperStrand	46	1	-8.3272
chr2	172383889	172383907	protein_coding	Tfap2c	utr3	ENSMUSG00000028640	ProperStrand	13	chr6	125112699	125112948	protein_coding	Gapdh	exon	ENSMUSG00000057666	ProperStrand	356	1	-12.8629
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr11	120347051	120349421	protein_coding	Mrpl12	exon	ENSMUSG00000039640	ProperStrand	49	1	-6.3032
chr7	123476695	123476771	snoRNA	ENSMUSG00000064741_Snord14a	.	ENSMUSG00000064741	ProperStrand	83	chr8	32260335	32260382	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-4.0135
mmu-miR-1949	6	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr2	119643638	119643670	protein_coding	Tyro3	utr3	ENSMUSG00000027298	ProperStrand	35	4	-19.8031
chr1	194681451	194681470	protein_coding	Sertad4	intron	ENSMUSG00000016262	ProperStrand	3	chr7	52378410	52378481	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	1	-14.8736
chr7	29137611	29137639	protein_coding	Rps16	exon	ENSMUSG00000037563	ProperStrand	191	chr4	56910500	56910590	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-3.8784
chr11	96976083	96976100	protein_coding	Tbx21	exon	ENSMUSG00000001444	ProperStrand	3	chr7	135123408	135123427	protein_coding	Fus	exon	ENSMUSG00000030795	ProperStrand	162	1	-17.9149
chr10	80642299	80642354	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr11	120294405	120294422	protein_coding	Nploc4	exon	ENSMUSG00000039703	ProperStrand	44	1	-6.7132
chr4	132049385	132049466	protein_coding	Sesn2	utr3	ENSMUSG00000028893	ProperStrand	75	chr13	96100551	96100651	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	1	-7.6227
chr16	32278132	32278148	protein_coding	Rnf168	utr5	ENSMUSG00000014074	ProperStrand	7	chr19	8799581	8799636	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-11.1722
chr11	4942271	4942312	protein_coding	Ap1b1	utr3	ENSMUSG00000009090	ProperStrand	43	chr3	68889030	68889130	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-3.8727
chr1	65291647	65291716	protein_coding	Pikfyve	intron	ENSMUSG00000025949	ProperStrand	59	chr2	26767770	26767807	snoRNA	ENSMUSG00000064829_SNORD36	.	ENSMUSG00000064829	ProperStrand	98	7	-18.9976
chr15	76736326	76736347	protein_coding	Rpl8	exon	ENSMUSG00000003970	ProperStrand	191	chr5	123622050	123622066	protein_coding	Hpd	exon	ENSMUSG00000029445	ProperStrand	254	1	-8.1043
chr11	68635312	68635333	protein_coding	Ndel1	utr3	ENSMUSG00000018736	NonProperStrand	3	chr15	34370544	34370644	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-9.7644
chr11	32635307	32635324	protein_coding	Fbxw11	exon	ENSMUSG00000020271	NonProperStrand	31	chr8	129468746	129468875	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	4	-17.3595
chr9	117974454	117984273	protein_coding	Cmc1	exon	ENSMUSG00000039163	ProperStrand	5	chr9	120039567	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-8.3145
chr9	21817529	21817582	protein_coding	Prkcsh	exon	ENSMUSG00000003402	ProperStrand	58	chr7	134343802	134343902	protein_coding	Tbc1d10b	exon	ENSMUSG00000042492	ProperStrand	187	2	-17.5853
chr4	21797544	21798593	protein_coding	Sfrs18	exon	ENSMUSG00000028248	NonProperStrand	26	chr11	69483136	69483229	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-6.7053
chr8	28231728	28231747	protein_coding	Gpr124	exon	ENSMUSG00000031486	ProperStrand	21	chr2	130101985	130102075	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	NonProperStrand	12	1	-19.1087
chr18	36957577	36957594	protein_coding	Zmat2	exon	ENSMUSG00000001383	ProperStrand	25	chr17	33767377	33767400	protein_coding	Zfp414	exon	ENSMUSG00000073423	ProperStrand	12	1	-18.4657
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr5	108336363	108336457	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	4	-3.1796
chr16	23113888	23113942	protein_coding	Eif4a2	utr3	ENSMUSG00000022884	ProperStrand	356	chr3	108357255	108357308	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	2	-2.7222
chr7	142896039	142896230	protein_coding	Mki67	exon	ENSMUSG00000031004	ProperStrand	286	chr9	64022879	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-4.9536
chr19	5797502	5797579	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr7	138706995	138709792	protein_coding	Bub3	exon	ENSMUSG00000066979	ProperStrand	24	1	-9.3897
chrX	98493314	98493330	protein_coding-noncoding	Nlgn3	utr5	ENSMUSG00000031302	NonProperStrand	1	chr16	23110939	23111001	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr14	76247711	76247843	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	chr8	73419649	73419791	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	67	-15.9632
chr10	126987291	126987307	protein_coding	Lrp1	exon	ENSMUSG00000040249	ProperStrand	151	chr15	34370545	34370674	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-3.5291
chr9	64024768	64025232	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	chr7	29136524	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	9	-3.2314
chr4	130039910	130040000	protein_coding	Snrnp40	exon	ENSMUSG00000074088	ProperStrand	12	chr11	97643016	97643096	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-5.5085
chr2	90235316	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	36760626	36760642	lincRNA	1500017E21Rik	intron	ENSMUSG00000087579	ProperStrand	11	1	-7.8469
chr17	56257328	56257346	LTR	RLTR25B	ERVK	chr17RLTR25B56257276	NonProperStrand	75	chr15	44211649	44211712	protein_coding	Nudcd1	exon	ENSMUSG00000038736	ProperStrand	10	1	-16.5507
chr9	110848516	110848547	protein_coding	Tdgf1	utr5	ENSMUSG00000032494	ProperStrand	218	chr2	130103433	130103501	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-5.5153
chrX	6951555	6951571	protein_coding	Usp27x	exon	ENSMUSG00000046269	NonProperStrand	36	chr14	33005038	33005089	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-4.9721
chr10	108131405	108131424	protein_coding	Syt1	intron	ENSMUSG00000035864	NonProperStrand	9	chr11	6428077	6428156	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-6.9084
chr11	120440464	120440501	protein_coding	Arhgdia	utr3	ENSMUSG00000025132	ProperStrand	39	chrX	34622906	34622943	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-3.9678
chr6	142840610	142840647	protein_coding	St8sia1	intron	ENSMUSG00000030283	ProperStrand	42	chr18	35714218	35714275	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.1088
chr18	36968519	36968607	SINE	B4A	B4	chr18B4A36968530	ProperStrand	1	chr18	37253638	37253718	protein_coding	Pcdha4	intron	ENSMUSG00000007440	NonProperStrand	11	1	-inf
chr7	133939534	133939581	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	chr7	123476594	123477246	protein_coding	Rps13	exon	ENSMUSG00000090862	ProperStrand	36	3	-20.7287
chr7	87225989	87226047	protein_coding	Zfp710	exon	ENSMUSG00000048897	ProperStrand	229	chr8	32260345	32260424	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	3	-5.9374
chr10	79326016	79326116	protein_coding	Ptbp1	utr3	ENSMUSG00000006498	ProperStrand	129	chr18	62053339	62053362	protein_coding	Ablim3	intron	ENSMUSG00000032735	NonProperStrand	4	1	-17.4555
chr7	6084052	6084152	protein_coding	Zfp787	exon	ENSMUSG00000046792	ProperStrand	16	chr10	23505204	23505257	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.4264
chr6	30451858	30451931	protein_coding	Tmem209	intron	ENSMUSG00000029782	ProperStrand	36	chr4	131865913	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-9.4307
chr13	114007733	114007749	protein_coding	Gzmk	intron	ENSMUSG00000042385	ProperStrand	14	chr16	23110828	23110882	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.2008
chr14	35124481	35133070	protein_coding	Glud1	exon	ENSMUSG00000021794	ProperStrand	72	chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	1	-8.1395
chr4	116862584	116862663	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	chr17	26360447	26360537	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	2	-9.1359
chr9	78327111	78328468	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr4	131908233	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	33	-1.1119
chr18	38461405	38461433	protein_coding	Rnf14	exon	ENSMUSG00000060450	ProperStrand	9	chr4	131908688	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.5343
chr11	96721909	96721926	protein_coding	Copz2	intron	ENSMUSG00000018672	ProperStrand	11	chr9	120038564	120038634	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-6.3233
chr8	83312873	83312942	protein_coding	Gab1	exon	ENSMUSG00000031714	ProperStrand	72	chr5	130300470	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.2024
chr16	18240811	18240911	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	chr3	123210854	123210891	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	6	-1.4442
chr18	38413976	38414012	protein_coding	0610009O20Rik	exon	ENSMUSG00000024442	ProperStrand	25	chr16	23110961	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.2939
chr2	48792295	48792349	protein_coding	Orc4	exon	ENSMUSG00000026761	ProperStrand	95	chr2	130103750	130103825	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-7.5543
chr13	80063475	80063491	SINE	B1_Mm	Alu	chr13B1_Mm80063450	ProperStrand	8	chr11	79997493	79997511	protein_coding	Rnf135	exon	ENSMUSG00000020707	NonProperStrand	18	1	-18.6388
chr13	74714991	74715091	LTR	ORR1A4-int	MaLR	chr13ORR1A4-int74714027	ProperStrand	1	chr18	35716823	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-inf
chr1	63617508	63617581	protein_coding	Adam23	exon	ENSMUSG00000025964	ProperStrand	59	chr4	63389602	63389618	protein_coding	Tnfsf15	utr3	ENSMUSG00000050395	NonProperStrand	121	1	-11.9383
chr7	117945584	117945600	protein_coding	Ampd3	intron	ENSMUSG00000005686	NonProperStrand	6	chr6	88034466	88034482	protein_coding	Rpn1	utr5	ENSMUSG00000030062	NonProperStrand	2	1	-inf
chr7	88738690	88738790	protein_coding	Whamm	exon	ENSMUSG00000045795	ProperStrand	7	chr15	79913288	79913346	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-7.8767
chr14	54988025	54988115	protein_coding	Oxa1l	exon	ENSMUSG00000000959	ProperStrand	31	chr5	108336382	108336462	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-6.1762
chr14	51427119	51427208	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	2	-9.1581
chr1	80286740	80286764	protein_coding	Cul3	exon	ENSMUSG00000004364	ProperStrand	15	chr12	106269289	106269389	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	4	-22.1689
chrX	39029534	39029551	protein_coding	Gria3	utr3	ENSMUSG00000001986	ProperStrand	32	chr11	69481332	69481433	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-4.3754
chr11	74743947	74744006	protein_coding	Smg6	exon	ENSMUSG00000038290	ProperStrand	29	chr13	51743603	51743703	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-8.3164
chr2	52285434	52285450	protein_coding	Cacnb4	utr3	ENSMUSG00000017412	ProperStrand	14	chr17	39985356	39985407	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-8.8617
chr15	37926515	37926695	protein_coding	Ubr5	exon	ENSMUSG00000037487	ProperStrand	258	chr2	144091829	144091952	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	ProperStrand	549	1	-5.9894
chr7	13511763	13511780	protein_coding	Rps5	exon	ENSMUSG00000012848	ProperStrand	108	chr5	116013316	116013369	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	1	-8.9704
chr2	34584334	34584434	protein_coding	Gapvd1	exon	ENSMUSG00000026867	ProperStrand	31	chr4	131908357	131908410	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.4690
chr2	26447688	26447704	protein_coding	Egfl7	exon	ENSMUSG00000026921	NonProperStrand	7	chr9	82736320	82736370	protein_coding	Irak1bp1	intron	ENSMUSG00000032251	ProperStrand	2	1	-inf
chr1	153770028	153770045	protein_coding	1700025G04Rik	intron	ENSMUSG00000032666	ProperStrand	25	chr16	33056581	33057232	protein_coding	Rpl35a	utr5	ENSMUSG00000060636	ProperStrand	33	1	-16.2280
chr4	133236079	133236179	protein_coding	Arid1a	utr3	ENSMUSG00000007880	ProperStrand	465	chr14	79980170	79980186	protein_coding	Elf1	exon	ENSMUSG00000036461	NonProperStrand	17	1	-11.7725
chr8	11221307	11221407	protein_coding	Col4a1	exon	ENSMUSG00000031502	ProperStrand	64	chr8	113362433	113362490	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	1	-9.1360
chr10	13705413	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr7	116662969	116663033	protein_coding-noncoding	Rpl27a	utr5	ENSMUSG00000046364	ProperStrand	57	1	-8.7084
chr9	109796226	109796306	protein_coding	Cdc25a	utr3	ENSMUSG00000032477	ProperStrand	27	chr7	116663668	116663758	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.9611
chr10	79619567	79619657	protein_coding	Midn	utr3	ENSMUSG00000035621	ProperStrand	36	chr18	33954824	33954904	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-4.4678
chr2	139519127	139519144	protein_coding	Ism1	intron	ENSMUSG00000074766	NonProperStrand	10	chr11	6428103	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-6.6888
chr11	69870769	69870785	protein_coding	Asgr1	exon	ENSMUSG00000020884	NonProperStrand	145	chr7	116663633	116663711	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.1527
chr4	8679760	8679836	protein_coding	Chd7	exon	ENSMUSG00000041235	ProperStrand	80	chr9	15118323	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	5	-13.0809
chr5	28070373	28070463	protein_coding	Paxip1	intron	ENSMUSG00000002221	ProperStrand	34	chr17	13112492	13112572	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-5.6854
chr7	116663655	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	chr9	15119287	15119428	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	66	-inf
chr7	134339399	134339415	protein_coding	Cd2bp2	intron	ENSMUSG00000042502	NonProperStrand	5	chr18	35714178	35714291	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-8.4504
chr1	90598740	90598758	protein_coding	Arl4c	utr5	ENSMUSG00000049866	ProperStrand	25	chr5	147646768	147646849	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	1	-9.7229
chr8	4328052	4328093	protein_coding	Ccl25	intron	ENSMUSG00000023235	ProperStrand	10	chr5	136611800	136611816	protein_coding	Lrwd1	exon	ENSMUSG00000029703	NonProperStrand	51	1	-17.4450
chr6	115742094	115742110	protein_coding	Cand2	exon	ENSMUSG00000030319	NonProperStrand	21	chr2	26493424	26493476	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-5.7727
chr11	14961829	14961849	LINE	Lx	L1	chr11Lx14961726	ProperStrand	93	chr7	25782317	25782379	protein_coding	Atp1a3	exon	ENSMUSG00000040907	ProperStrand	66	1	-12.2410
chr5	140238291	140238391	protein_coding	Ints1	exon	ENSMUSG00000029547	ProperStrand	45	chr13	49779768	49779802	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-7.5873
chr7	30105914	30231599	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	chr5	74489585	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	9	-9.3868
chr10	110376380	110376401	protein_coding	Csrp2	utr3	ENSMUSG00000020186	ProperStrand	24	chr2	30248324	30248340	protein_coding	Dolpp1	intron	ENSMUSG00000026856	ProperStrand	13	1	-18.3007
chr13	69765958	69766013	protein_coding	Nsun2	exon	ENSMUSG00000021595	ProperStrand	110	chr2	121949510	121949526	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	2	-14.3902
chr11	100230829	100230846	protein_coding-noncoding	Jup	utr3	ENSMUSG00000001552	ProperStrand	1	chr7	117166762	117166862	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-inf
chr10	51865578	51865594	protein_coding	Ros1	exon	ENSMUSG00000019893	NonProperStrand	15	chr12	112779229	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	3	-17.1152
chr9	57217029	57217046	LINE	Lx4A	L1	chr9Lx4A57216705	ProperStrand	16	chr16	23111386	23111505	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-8.8328
chr11	102294588	102294607	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr17	35089181	35089210	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	2	-2.8727
chr1	56907122	56907139	protein_coding	Satb2	exon	ENSMUSG00000038331	NonProperStrand	24	chr5	121655016	121655129	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.5126
chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-6.4512
chr16	23110454	23110579	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	chr13	23528224	23528284	tRNA	tRNA103-LysCTT	.	618186	ProperStrand	180	2	-1.7149
chr2	26768395	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	chr1	89681174	89681274	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	8	-3.0216
chr15	83058330	83080525	protein_coding	A4galt	intron	ENSMUSG00000047878	ProperStrand	21	chr16	23110861	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-4.6345
chr9	83678798	83681878	protein_coding	Elovl4	exon	ENSMUSG00000032262	ProperStrand	159	chr12	106269286	106269336	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	6	-13.8402
chr12	101759078	101759095	Low_complexity	GC_rich	Low_complexity	chr12GC_rich101758901	ProperStrand	34	chr8	13416895	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-7.5866
chr5	137738717	137739102	protein_coding	Srrt	exon	ENSMUSG00000037364	ProperStrand	31	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.5406
chr2	26493365	26493474	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr16	23109051	23109090	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	7	-2.1361
chr9	69315139	69315186	protein_coding	Anxa2	exon	ENSMUSG00000032231	ProperStrand	43	chr1	63225679	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	2	-11.7772
chr5	100855902	100855973	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr12	111896958	111897149	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	1	-2.1973
chr9	108238754	108238795	protein_coding	Rhoa	intron	ENSMUSG00000007815	ProperStrand	45	chr14	76247753	76247778	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-4.7221
chr14	51427119	51427219	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr18	61918347	61918363	protein_coding	Afap1l1	exon	ENSMUSG00000033032	NonProperStrand	7	1	-11.6202
chr12	86221861	86221951	DNA	URR1B	MER1_type	chr12URR1B86221691	ProperStrand	2	chr15	36535555	36535645	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	1	-15.3600
chr16	57391759	57391792	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-1.8184
chr16	10960839	10960947	protein_coding	Litaf	utr3	ENSMUSG00000022500	ProperStrand	25	chr16	23110563	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.0525
chr17	21862635	21862652	LTR	RLTR9A	ERVK	chr17RLTR9A21862625	NonProperStrand	3	chr2	160586902	160587128	protein_coding	Plcg1	exon	ENSMUSG00000016933	ProperStrand	65	1	-inf
chr5	76709689	76709779	protein_coding	Clock	intron	ENSMUSG00000029238	ProperStrand	16	chr9	34682632	34682722	protein_coding	Kirrel3	intron	ENSMUSG00000032036	NonProperStrand	24	1	-17.7741
chr4	135521534	135521550	protein_coding	Gale	exon	ENSMUSG00000028671	ProperStrand	61	chr5	121655099	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.7168
chr17	66468411	66468427	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	chr5	121658442	121658570	protein_coding	Rpl6	exon	ENSMUSG00000029614	ProperStrand	332	1	-6.4513
chr11	86054420	86054520	protein_coding	Ints2	intron	ENSMUSG00000018068	ProperStrand	17	chr9	120038613	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.4412
chr19	42167495	42167585	protein_coding	Pi4k2a	intron	ENSMUSG00000025178	ProperStrand	23	chr3	123210887	123210967	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.7662
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	92949256	92949273	protein_coding	Lrrfip1	intron	ENSMUSG00000026305	NonProperStrand	8	1	-8.5166
chr7	4691730	4691750	protein_coding	Suv420h2	utr5	ENSMUSG00000059851	NonProperStrand	70	chr10	62892223	62892272	tRNA	tRNA1095-SerTGA	.	1014897	ProperStrand	11	1	-16.4658
chr11	80571453	80571470	protein_coding	Myo1d	intron	ENSMUSG00000035441	NonProperStrand	24	chr17	35089181	35089229	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-7.3058
chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	chr7	148414686	148414704	protein_coding	Phrf1	utr5	ENSMUSG00000038611	NonProperStrand	4	1	-14.5061
chr11	97889735	97889778	protein_coding	Rpl19	exon	ENSMUSG00000017404	ProperStrand	120	chr4	155004377	155004477	protein_coding	Cdk11b	intron	ENSMUSG00000029062	ProperStrand	92	1	-11.0626
chr14	31827477	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	chr10	110918550	110918694	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	13	-4.6556
chr4	21606097	21606114	protein_coding	Prdm13	exon	ENSMUSG00000040478	ProperStrand	51	chr15	73559007	73559023	protein_coding	Ptp4a3	intron	ENSMUSG00000059895	ProperStrand	45	1	-14.2233
chr8	87204218	87204257	protein_coding	Nacc1	intron	ENSMUSG00000001910	ProperStrand	130	chr14	118513552	118514341	protein_coding	Tgds	exon	ENSMUSG00000022130	ProperStrand	5	3	-18.8889
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr11	119960316	119960332	protein_coding	1810043H04Rik	exon	ENSMUSG00000078572	ProperStrand	12	1	-12.2070
chr9	25059948	25059964	protein_coding	Sept7	intron	ENSMUSG00000001833	ProperStrand	101	chr19	8963118	8963180	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-2.7438
chr19	4860522	4860622	protein_coding	Ctsf	utr3	ENSMUSG00000083282	ProperStrand	6	chr18	33954911	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-8.1162
chr1	140852714	140852731	LINE	L2b	L2	chr1L2b140852678	NonProperStrand	5	chr2	90235303	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	1	-9.5408
chr19	46156804	46157012	protein_coding	Nolc1	exon	ENSMUSG00000015176	ProperStrand	53	chr15	79913288	79913329	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-6.4588
chr8	84220524	84557086	protein_coding	Inpp4b	intron	ENSMUSG00000037940	NonProperStrand	33	chr16	23110828	23110955	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-4.5464
chr17	59922062	59922142	LINE	L1_Mm	L1	chr17L1_Mm59922020	NonProperStrand	1	chr16	43149710	43149800	protein_coding	Zbtb20	intron	ENSMUSG00000022708	ProperStrand	28	1	-inf
chr12	74204340	74204390	protein_coding	Six4	utr3	ENSMUSG00000034460	ProperStrand	33	chr5	130300494	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.5813
chr11	59615828	59617290	protein_coding	Flcn	exon	ENSMUSG00000032633	ProperStrand	52	chr10	90581049	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-5.0842
chr1	34248410	34248538	protein_coding	Dst	utr5	ENSMUSG00000026131	ProperStrand	461	chr4	57154472	57154489	protein_coding	Epb4.1l4b	intron	ENSMUSG00000028434	NonProperStrand	54	1	-9.4423
chr17	24665420	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	chr4	130305592	130305620	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	2	-3.4318
chr3	85448965	85456213	protein_coding	Pet112l	exon	ENSMUSG00000028085	ProperStrand	81	chr11	106362638	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-6.8081
chr16	31963253	31963269	protein_coding	Senp5	utr3	ENSMUSG00000022772	NonProperStrand	5	chr15	34370544	34370625	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-8.5662
chr4	62046603	62046658	protein_coding	Slc31a1	exon	ENSMUSG00000066150	ProperStrand	45	chr18	35714145	35714235	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	14	-19.9658
chrX	6993024	6993043	lincRNA	2010204K13Rik	intron	ENSMUSG00000063018	NonProperStrand	3	chr4	131908749	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-6.9471
chr2	155645810	155645842	protein_coding	Eif6	utr3	ENSMUSG00000027613	ProperStrand	42	chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	1	-10.2070
chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	chr17	35089239	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-2.0035
chr7	20288626	20288726	protein_coding	Tomm40	exon	ENSMUSG00000002984	ProperStrand	57	chr9	120038609	120038672	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.1312
chr17	94768315	94768333	LINE	L1_Mus3	L1	chr17L1_Mus394764195	ProperStrand	24	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-10.4435
chr14	19101593	19101663	protein_coding	Rpl15	exon	ENSMUSG00000012405	ProperStrand	145	chr9	30235085	30235102	protein_coding	Snx19	exon	ENSMUSG00000031993	ProperStrand	353	4	-inf
chr1	90162027	90162077	protein_coding	Hjurp	exon	ENSMUSG00000044783	ProperStrand	110	chr2	26493365	26493473	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-2.6506
chr11	120824872	120824889	protein_coding	Csnk1d	utr3	ENSMUSG00000025162	NonProperStrand	10	chr8	129468773	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-7.9945
chr16	5100103	5100119	protein_coding	Ppl	exon	ENSMUSG00000039457	ProperStrand	37	chr2	154697322	154697373	protein_coding	Eif2s2	utr3	ENSMUSG00000074656	ProperStrand	96	1	-13.3449
chr2	130103454	130103502	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	chr15	34370587	34370667	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	4	-1.2044
chr3	113857069	113857088	protein_coding	Col11a1	intron	ENSMUSG00000027966	NonProperStrand	139	chr9	119664282	119664299	protein_coding	Scn11a	exon	ENSMUSG00000034115	ProperStrand	55	1	-11.8016
chr1	162966812	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	chr18	33954816	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	22	-9.2205
chr16	26504951	26504967	protein_coding	Tmem207	exon	ENSMUSG00000091972	NonProperStrand	34	chr7	117166721	117166760	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-5.9266
chr11	67478893	67484114	protein_coding	Gas7	exon	ENSMUSG00000033066	ProperStrand	9	chr12	106269396	106269476	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-7.9279
chr3	152450608	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	chr3	95980321	95980410	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-2.5972
chr4	147043337	147043427	lincRNA	Gm16211	exon	ENSMUSG00000086130	ProperStrand	1	chr7	148634705	148634785	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-inf
chr1	82892247	82892338	protein_coding	Agfg1	utr3	ENSMUSG00000026159	ProperStrand	25	chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	3	-20.3847
chr17	35299502	35299643	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	chr16	23110453	23110584	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	40	-1.5177
chr11	88705726	88705787	protein_coding	Akap1	exon	ENSMUSG00000018428	ProperStrand	45	chr17	24857768	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	3	-7.2543
chr5	124837528	124837544	protein_coding	Sbno1	exon	ENSMUSG00000038095	ProperStrand	134	chr5	108334219	108334322	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	2	-5.6579
chr3	27038500	27038552	protein_coding	Ect2	exon	ENSMUSG00000027699	ProperStrand	17	chr4	131908809	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.3002
chr4	45863078	45863158	protein_coding	1300002K09Rik	intron	ENSMUSG00000028327	ProperStrand	2	chr12	80371133	80371223	protein_coding	Zfyve26	intron	ENSMUSG00000066440	ProperStrand	44	1	-inf
chr9	111592583	111592601	protein_coding	Stac	exon	ENSMUSG00000032502	ProperStrand	22	chr5	117559800	117559818	protein_coding	Suds3	exon	ENSMUSG00000066900	NonProperStrand	8	1	-18.6015
chr2	145077955	145209256	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	chr19	8800085	8800103	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-2.3192
chr6	116358877	116358955	protein_coding	March8	utr3	ENSMUSG00000025702	ProperStrand	6	chr7	16534823	16534839	protein_coding	Ehd2	utr3	ENSMUSG00000074364	NonProperStrand	197	1	-15.6665
chr17	25322235	25322291	pseudogene	BC003965	.	ENSMUSG00000067722	ProperStrand	6	chr16	23110911	23110957	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-10.1290
chr17	45704850	45708041	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr5	74489543	74489677	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	10	-2.8859
chr7	38773320	38773359	protein_coding	C80913	intron	ENSMUSG00000030421	ProperStrand	25	chr16	91714531	91714572	protein_coding	Cryzl1	intron	ENSMUSG00000058240	ProperStrand	4	1	-19.5900
chr2	53076430	53076450	protein_coding	Arl6ip6	utr3	ENSMUSG00000026960	ProperStrand	8	chr4	131908689	131908806	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.7736
chr19	3904233	3904250	protein_coding	Tcirg1	exon	ENSMUSG00000001750	ProperStrand	77	chr17	35089181	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-5.0002
chr7	106755021	106755121	protein_coding	Arrb1	utr3	ENSMUSG00000018909	ProperStrand	46	chr16	23110839	23110990	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	19	-19.9750
chr12	88488443	88496423	protein_coding	Pomt2	exon	ENSMUSG00000034126	NonProperStrand	331	chr14	31827478	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-3.6489
chr2	99908739	99908819	LINE	L1_Mus4	L1	chr2L1_Mus499908609	ProperStrand	1	chr2	99908396	99908486	LINE	Lx4B	L1	chr2Lx4B99907910	NonProperStrand	1	1	-inf
chr11	98877809	98877832	protein_coding	Top2a	exon	ENSMUSG00000020914	ProperStrand	324	chr17	7486174	7487106	protein_coding	Rps6ka2	exon	ENSMUSG00000023809	ProperStrand	47	1	-10.4260
chr9	42063828	42064237	protein_coding	Sc5d	exon	ENSMUSG00000032018	ProperStrand	19	chr16	23110829	23110871	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-9.4108
chr5	3693225	3693242	protein_coding	Ankib1	exon	ENSMUSG00000040351	NonProperStrand	98	chr17	24857765	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.5223
chr17	12420937	12422423	protein_coding	Map3k4	utr3	ENSMUSG00000014426	ProperStrand	36	chr4	131908751	131908831	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.9880
chr7	13614232	13614439	protein_coding	Trim28	exon	ENSMUSG00000005566	ProperStrand	296	chr16	34986602	34986619	protein_coding	Mylk	exon	ENSMUSG00000022836	NonProperStrand	56	2	-16.1539
chr17	31242476	31242577	protein_coding	Abcg1	exon	ENSMUSG00000024030	ProperStrand	36	chr8	73419657	73419726	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.0767
chr8	125626821	125627117	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	chr11	69730435	69730451	protein_coding	Eif5a	utr3	ENSMUSG00000078812	ProperStrand	164	1	-8.5966
chr9	114657111	114657168	protein_coding	Cmtm6	utr3	ENSMUSG00000032434	ProperStrand	24	chr19	8963054	8963154	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	4	-13.0125
chr16	23110993	23111010	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr2	48771901	48771991	protein_coding	Orc4	intron	ENSMUSG00000026761	ProperStrand	95	1	-8.0946
chr10	76517667	76518354	protein_coding	Col18a1	exon	ENSMUSG00000001435	ProperStrand	287	chr18	33954816	33954896	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	11	-18.3141
chr16	55918665	55918692	protein_coding	Cep97	exon	ENSMUSG00000022604	ProperStrand	22	chr4	131866173	131866291	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	5	-20.0515
chr12	56700673	56700691	protein_coding	Insm2	exon	ENSMUSG00000045440	NonProperStrand	22	chr4	131865929	131865977	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.5019
chr19	8799628	8799659	lincRNA	Snhg1	exon	ENSMUSG00000090867	ProperStrand	100	chr19	8799581	8799624	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	2	-9.3876
chr6	128272466	128272555	protein_coding	Tulp3	utr3	ENSMUSG00000001521	ProperStrand	18	chr18	35716852	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-10.6484
chr14	79312001	79312072	protein_coding	1300010F03Rik	exon	ENSMUSG00000058997	ProperStrand	29	chr5	108334195	108334264	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-6.2466
chr4	33051766	33051818	pseudogene	Gm11942	.	ENSMUSG00000059634	ProperStrand	27	chr18	35716831	35716876	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.5820
chr17	34089206	34089366	protein_coding	Rps18	exon	ENSMUSG00000008668	ProperStrand	111	chr9	120039626	120039682	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.2439
chrX	70237450	70237472	miRNA	Mir2137	.	ENSMUSG00000089357	ProperStrand	50	chr12	12944235	12944251	protein_coding	Mycn	exon	ENSMUSG00000037169	NonProperStrand	109	1	-12.4815
chr14	35170125	35170187	SINE	B4	B4	chr14B435170079	ProperStrand	11	chr10	110918549	110918667	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	3	-15.7424
chr15	89138136	89138152	protein_coding	Sbf1	exon	ENSMUSG00000036529	NonProperStrand	4	chr12	88778746	88778765	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-12.1495
chr6	122678194	122685389	protein_coding	Slc2a3	utr3	ENSMUSG00000003153	ProperStrand	682	chr18	35716707	35716884	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	9	-2.0542
chr12	71260419	71260439	protein_coding	Abhd12b	exon	ENSMUSG00000090121	NonProperStrand	2	chr4	131908689	131908768	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-8.0336
chr7	52133013	52133113	DNA	Charlie8	MER1_type	chr7Charlie852133001	ProperStrand	2	chr15	5068422	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-13.5040
chr1	174427115	174427131	protein_coding	Igsf9	utr3	ENSMUSG00000037995	NonProperStrand	7	chr6	125087099	125087153	protein_coding	Nop2	exon	ENSMUSG00000038279	ProperStrand	39	1	-18.1033
chr7	130363533	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	chr9	57948985	57949003	protein_coding	Ccdc33	intron	ENSMUSG00000037716	ProperStrand	4	2	-19.7869
chr1	58228679	58228696	protein_coding	Aox3	exon	ENSMUSG00000064294	ProperStrand	39	chr1	162965531	162965601	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.0770
chr7	24779190	24779213	SINE	ID_B1	B4	chr7ID_B124779183	NonProperStrand	54	chr1	39707543	39707559	protein_coding	Creg2	exon	ENSMUSG00000050967	ProperStrand	6	1	-18.0672
chr8	86254084	86254120	protein_coding	Cd97	exon	ENSMUSG00000002885	ProperStrand	37	chr11	62416578	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	4	-18.4835
chr17	45704136	45704155	protein_coding	Slc35b2	exon	ENSMUSG00000037089	ProperStrand	55	chr16	23111373	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-5.8793
chr2	37206166	37206256	protein_coding	Pdcl	utr3	ENSMUSG00000009030	ProperStrand	32	chr18	35073794	35091267	protein_coding	Etf1	exon	ENSMUSG00000024360	ProperStrand	74	2	-20.5474
chr2	21568083	21750336	protein_coding	Gpr158	intron	ENSMUSG00000045967	ProperStrand	11	chr16	23110829	23110919	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-4.7202
chr8	91554006	91554096	protein_coding	Sall1	exon	ENSMUSG00000031665	ProperStrand	96	chr5	108334207	108334260	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-3.9264
chr17	87832826	87832874	protein_coding	Calm2	utr3	ENSMUSG00000036438	ProperStrand	59	chr4	131908263	131908353	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-2.7259
chr9	65889685	65889775	protein_coding	Csnk1g1	utr3	ENSMUSG00000032384	ProperStrand	31	chr18	35714145	35714225	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.6912
chr2	26247403	26247424	protein_coding	Pmpca	exon	ENSMUSG00000026926	ProperStrand	45	chr9	65044376	65044421	snRNA	ENSMUSG00000075763_U5	.	ENSMUSG00000075763	ProperStrand	216	1	-11.3243
chr9	118981398	118981420	protein_coding	Plcd1	exon	ENSMUSG00000010660	ProperStrand	15	chr2	158185571	158185655	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	5	-inf
chr10	59489369	59489459	protein_coding	Ascc1	intron	ENSMUSG00000044475	ProperStrand	18	chr7	116663649	116663729	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.7447
chr16	57164420	57166285	protein_coding	Nit2	exon	ENSMUSG00000022751	ProperStrand	6	chr2	158205268	158205358	snoRNA	ENSMUSG00000064585_SNORA71	.	ENSMUSG00000064585	ProperStrand	418	1	-14.1868
chr10	79584314	79584414	protein_coding	Stk11	intron	ENSMUSG00000003068	ProperStrand	24	chr18	33954912	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-5.2576
chr5	65952377	65952395	protein_coding	Ube2k	intron	ENSMUSG00000029203	ProperStrand	289	chr11	6428088	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-1.6025
chrX	70237450	70237472	miRNA	Mir2137	.	ENSMUSG00000089357	ProperStrand	50	chr4	131908356	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	6	-11.2644
chr6	88462497	88462577	protein_coding	Sec61a1	exon	ENSMUSG00000030082	ProperStrand	46	chr19	8963097	8963187	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.7301
chr4	131399490	131399506	protein_coding	Mecr	exon	ENSMUSG00000028910	NonProperStrand	109	chr7	134341513	134341555	protein_coding	Tbc1d10b	utr3	ENSMUSG00000042492	ProperStrand	187	1	-9.8345
chr2	26493442	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr16	11154532	11154551	protein_coding-noncoding	Zc3h7a	utr3	ENSMUSG00000037965	ProperStrand	7	1	-10.5903
chr6	85411157	85412063	protein_coding	Cct7	exon	ENSMUSG00000030007	ProperStrand	173	chr6	115757990	115758041	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	4	-11.5267
chr4	68463648	68463664	protein_coding	Dbc1	intron	ENSMUSG00000028351	ProperStrand	78	chr17	35089181	35089232	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-4.9753
chr16	11144162	11144278	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr5	121655013	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	NonProperStrand	38	3	-20.4710
chr1	57416040	57416120	LTR	MLT1N2	MaLR	chr1MLT1N257416027	NonProperStrand	1	chr1	57416170	57416260	lincRNA	4930558J18Rik	exon	ENSMUSG00000084958	NonProperStrand	28	1	-inf
chr2	4805494	4805586	protein_coding	Sephs1	exon	ENSMUSG00000026662	ProperStrand	20	chr16	23111454	23111505	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.0472
chr11	55814362	55814380	antisense	Gm12239	.	ENSMUSG00000086020	ProperStrand	5	chr19	8800365	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-13.9604
chr10	85363760	85363809	protein_coding	Prdm4	exon	ENSMUSG00000035529	ProperStrand	11	chr19	8895022	8895060	protein_coding	Hnrnpul2	exon	ENSMUSG00000071659	ProperStrand	93	1	-15.8614
chr10	126899274	126902062	protein_coding	R3hdm2	exon	ENSMUSG00000025404	ProperStrand	33	chr17	35299551	35299631	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-5.9462
chr4	43505693	43505773	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr8	109603362	109605075	protein_coding	Terf2	exon	ENSMUSG00000031921	ProperStrand	34	2	-6.9321
chr8	74743894	74745829	protein_coding	Fam32a	exon	ENSMUSG00000003039	ProperStrand	11	chr5	108336378	108336458	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-8.2822
chr18	32263317	32263333	protein_coding	Iws1	utr3	ENSMUSG00000024384	ProperStrand	72	chr1	182823287	182823401	protein_coding	Lefty2	utr5	ENSMUSG00000066652	ProperStrand	48	1	-13.3966
chr8	11448205	11448305	protein_coding	Col4a2	exon	ENSMUSG00000031503	ProperStrand	74	chr12	60141469	60141508	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	2	-10.3799
chr5	74489287	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr3	89892300	89892334	protein_coding-noncoding	Tpm3	utr5	ENSMUSG00000027940	ProperStrand	40	1	-6.4218
chr15	79913282	79913372	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr12	55835615	55835695	snRNA	ENSMUSG00000075960_U1	.	ENSMUSG00000075960	ProperStrand	210	10	-19.6620
chr8	11561875	11561965	protein_coding	Ing1	exon	ENSMUSG00000045969	ProperStrand	38	chr16	23111374	23111454	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.9421
chr13	9833567	9833656	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr11	120440265	120440351	protein_coding	Arhgdia	utr3	ENSMUSG00000025132	ProperStrand	39	1	-5.7963
chr19	44188377	44188477	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr1	172975151	172975189	tRNA	tRNA699-GlyGCC	.	1000	ProperStrand	660	1	-3.1757
chr17	36061813	36063346	protein_coding	Ppp1r10	exon	ENSMUSG00000039220	ProperStrand	45	chr1	93263060	93263076	protein_coding	Fam132b	exon	ENSMUSG00000047443	NonProperStrand	98	2	-20.4248
chr12	82836202	82844804	protein_coding	Map3k9	exon	ENSMUSG00000042724	ProperStrand	92	chr7	150717298	150717415	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	5	-18.4466
chr17	35152769	35152829	protein_coding	Vars	exon	ENSMUSG00000007029	ProperStrand	121	chr1	88247785	88247875	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-3.7628
chr4	52110265	52110355	LTR	MTA_Mm	MaLR	chr4MTA_Mm52110152	NonProperStrand	1	chr2	44717030	44717110	protein_coding	Gtdc1	utr5	ENSMUSG00000036890	NonProperStrand	13	1	-inf
chr3	123210854	123210897	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	chr11	58115972	58116007	tRNA	tRNA1911-LeuCAA	.	749913	ProperStrand	165	2	-1.4228
chr5	8827745	8827835	protein_coding	Abcb1b	exon	ENSMUSG00000028970	ProperStrand	7	chr19	8800377	8800457	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-7.8093
chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	chr11	95934852	95934925	protein_coding	Atp5g1	exon	ENSMUSG00000006057	ProperStrand	9	2	-20.2725
chr2	166890504	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	chr17	35088971	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	2	-1.8121
chr17	91341893	91341910	protein_coding	Nrxn1	intron	ENSMUSG00000024109	ProperStrand	34	chr4	99634133	99634187	protein_coding	Pgm2	exon	ENSMUSG00000025791	ProperStrand	43	1	-15.1312
chr15	76911277	76911320	protein_coding	Rbfox2	utr3	ENSMUSG00000033565	ProperStrand	55	chr4	131908689	131908748	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.3443
chr6	128910895	128910912	antisense	Gm15987	.	ENSMUSG00000085786	ProperStrand	5	chr7	52382014	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-11.8573
chr17	80429672	80429749	protein_coding	Hnrpll	utr3	ENSMUSG00000024095	ProperStrand	27	chr1	162967502	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.9934
chr7	51828028	51828044	protein_coding	Napsa	exon	ENSMUSG00000002204	ProperStrand	88	chr11	115871242	115871294	protein_coding	Galk1	exon	ENSMUSG00000020766	ProperStrand	24	1	-14.3970
chr15	98604924	98606960	protein_coding	Wnt10b	exon	ENSMUSG00000022996	NonProperStrand	189	chr7	30186008	30186090	protein_coding	Sipa1l3	utr5	ENSMUSG00000030583	ProperStrand	559	1	-6.5649
chr6	90963967	90963983	protein_coding	Nup210	utr3	ENSMUSG00000030091	NonProperStrand	22	chr9	15119300	15119390	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-7.0967
chr10	80616734	80616801	protein_coding	Pias4	utr3	ENSMUSG00000004934	ProperStrand	43	chr8	32260343	32260361	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-5.2753
chr2	90235320	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr14	29319237	29319253	protein_coding	Wnt5a	utr5	ENSMUSG00000021994	NonProperStrand	26	1	-6.0972
chr4	43505656	43505721	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr1	120807439	120807508	protein_coding	Gli2	intron	ENSMUSG00000048402	ProperStrand	148	1	-1.5733
chr4	35099712	35099728	protein_coding	Mob3b	intron	ENSMUSG00000073910	ProperStrand	13	chr11	116938629	116938719	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	NonProperStrand	2	1	-inf
chr1	63225254	63225274	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	chr4	56910496	56910589	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	5	-9.7888
chr15	83770046	83770063	protein_coding	Efcab6	intron	ENSMUSG00000022441	ProperStrand	60	chr6	124761084	124761128	protein_coding	Tpi1	utr3	ENSMUSG00000023456	ProperStrand	94	1	-12.4108
chr9	93684772	93684862	LINE	L1_Mur3	L1	chr9L1_Mur393684300	ProperStrand	1	chr9	93685270	93685350	LTR	MTC	MaLR	chr9MTC93684963	ProperStrand	1	1	-inf
chr9	108958591	108958884	protein_coding	Shisa5	exon	ENSMUSG00000025647	ProperStrand	43	chr9	120038605	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.6477
chr2	150068099	150068189	LINE	L1Md_F3	L1	chr2L1Md_F3150067916	ProperStrand	40	chr2	20015084	20015164	protein_coding	Etl4	intron	ENSMUSG00000036617	NonProperStrand	23	1	-16.0424
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr10	17547610	17547626	protein_coding	Txlnb	exon	ENSMUSG00000039891	ProperStrand	70	1	-8.2845
chr9	61242488	61249720	protein_coding	Tle3	exon	ENSMUSG00000032280	ProperStrand	88	chr2	151698919	151698936	protein_coding	Rspo4	utr3	ENSMUSG00000032852	NonProperStrand	2	1	-inf
chr9	21573142	21573209	protein_coding	Kank2	utr3	ENSMUSG00000032194	ProperStrand	196	chr17	35299507	35299526	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-2.5997
chr2	181686076	181686100	LTR	RMER4A	ERVK	chr2RMER4A181685986	NonProperStrand	4	chr11	48615541	48615641	protein_coding-noncoding	Gnb2l1	utr5	ENSMUSG00000020372	ProperStrand	21	1	-19.5361
chr11	8333832	8333932	protein_coding	Tns3	utr3	ENSMUSG00000020422	ProperStrand	81	chr5	74489606	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-3.2265
chr15	57707464	57707522	protein_coding	Derl1	intron	ENSMUSG00000022365	ProperStrand	7	chr8	74490958	74491048	protein_coding	Zfp961	intron	ENSMUSG00000052446	ProperStrand	35	1	-18.9384
chr7	52748648	52748738	protein_coding	Nucb1	utr3	ENSMUSG00000030824	ProperStrand	49	chr11	69481354	69481434	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.5713
chr9	78046112	78046170	protein_coding	Gsta4	exon	ENSMUSG00000032348	ProperStrand	82	chr17	27226288	27226562	protein_coding	Itpr3	exon	ENSMUSG00000042644	ProperStrand	137	1	-11.0279
chr5	135079019	135079036	protein_coding	Lat2	exon	ENSMUSG00000040751	ProperStrand	2	chr1	162967515	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-10.7784
chr4	108297584	108298056	protein_coding	Cc2d1b	exon	ENSMUSG00000028582	ProperStrand	13	chr4	131865427	131865456	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	2	-11.3941
chr5	141090405	141090422	protein_coding	Lfng	exon	ENSMUSG00000029570	NonProperStrand	92	chr15	72737569	72737589	protein_coding	Trappc9	intron	ENSMUSG00000047921	NonProperStrand	53	1	-12.7051
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr10	90581105	90581195	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-0.8751
chr1	74641165	74641230	protein_coding	Rnf25	exon	ENSMUSG00000026171	ProperStrand	3	chr11	6428058	6428158	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-9.3720
chr11	106858651	106858691	protein_coding	Kpna2	intron	ENSMUSG00000018362	ProperStrand	70	chr4	86501791	86501820	protein_coding	Rps6	exon	ENSMUSG00000028495	ProperStrand	263	1	-10.0411
chr9	21552962	21553052	protein_coding	Ldlr	utr3	ENSMUSG00000032193	ProperStrand	60	chr5	108336375	108336428	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-4.8809
chr11	75309869	75309928	protein_coding	Prpf8	utr3	ENSMUSG00000020850	ProperStrand	255	chr18	35714184	35714274	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-1.1027
chr5	114870376	114870413	protein_coding	Ube3b	utr3	ENSMUSG00000029577	ProperStrand	26	chr2	79843543	79843559	protein_coding	Pde1a	intron	ENSMUSG00000059173	NonProperStrand	275	2	-18.7785
chr11	97891698	97891763	protein_coding	Rpl19	utr3	ENSMUSG00000017404	ProperStrand	120	chr9	15119646	15119736	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	4	-6.2052
chr17	24306221	24306319	protein_coding	Atp6v0c	utr5	ENSMUSG00000024121	ProperStrand	75	chr6	115757991	115758010	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	2	-8.3000
chr11	69870769	69870785	protein_coding	Asgr1	exon	ENSMUSG00000020884	NonProperStrand	145	chr9	120039569	120039622	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.8141
chr3	19034064	19034154	protein_coding	Armc1	exon	ENSMUSG00000027599	ProperStrand	2	chr11	69481353	69481433	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-10.4764
chr5	127737478	127737494	antisense	1700085B03Rik	.	ENSMUSG00000087104	ProperStrand	55	chr4	147931408	147931505	protein_coding	Mtor	utr3	ENSMUSG00000028991	ProperStrand	65	1	-13.3276
chr19	47205280	47205296	protein_coding	Pdcd11	exon	ENSMUSG00000025047	ProperStrand	137	chr16	23110454	23110508	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.1891
chr8	125418803	125418819	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	chr12	17552949	17553031	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-1.7817
chr11	33056713	33057036	protein_coding	Npm1	exon	ENSMUSG00000057113	ProperStrand	352	chr2	18508667	18508688	tRNA	tRNA1947-AsnGTT	.	111998	ProperStrand	179	3	-16.8520
chr11	80707576	80707593	protein_coding	Accn1	exon	ENSMUSG00000020704	ProperStrand	69	chr10	90581032	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	2	-7.5439
chr17	35806259	35806275	protein_coding	Gtf2h4	exon	ENSMUSG00000001524	ProperStrand	9	chr4	116828379	116828453	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-12.2656
chr11	77994781	77994823	protein_coding	Rpl23a	intron	ENSMUSG00000058546	ProperStrand	121	chr11	69483165	69483265	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.3499
chr11	3579770	3579940	protein_coding	Morc2a	exon	ENSMUSG00000034543	ProperStrand	62	chr2	26493389	26493479	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-3.6816
chr3	96528262	96528324	snoRNA	ENSMUSG00000065669_SNORA5	.	ENSMUSG00000065669	ProperStrand	180	chr17	24857740	24857840	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	4	-3.7514
chr12	102191562	102192382	protein_coding	Ccdc88c	exon	ENSMUSG00000021182	ProperStrand	151	chr10	23505152	23505182	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-1.2537
chr18	10052129	10052153	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	ProperStrand	1	chr16	23110908	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	NonProperStrand	93	1	-inf
chr12	110925010	110925044	snoRNA	ENSMUSG00000064726_SNORD113	.	ENSMUSG00000064726	ProperStrand	42	chr19	8800355	8800444	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-4.1983
chr6	30162058	30214834	protein_coding	Ube2h	intron	ENSMUSG00000039159	ProperStrand	96	chr4	131865855	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-2.1425
chr5	27198618	27198636	protein_coding	Dpp6	intron	ENSMUSG00000061576	NonProperStrand	32	chr4	131865408	131865498	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-5.2110
chr1	174419680	174419696	protein_coding	Igsf9	exon	ENSMUSG00000037995	ProperStrand	13	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-8.2769
chr2	29926940	29927845	protein_coding	Set	utr3	ENSMUSG00000054766	ProperStrand	167	chr10	23505152	23505215	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-1.7094
chr2	167273529	167273609	protein_coding	Slc9a8	intron	ENSMUSG00000039463	ProperStrand	26	chr15	34370545	34370635	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-5.1461
chr12	112565198	112565215	protein_coding	Cdc42bpb	intron	ENSMUSG00000021279	ProperStrand	128	chr4	107747047	107757791	protein_coding	Scp2	exon	ENSMUSG00000028603	ProperStrand	23	1	-13.7324
chr11	113517663	113517684	protein_coding	Cog1	exon	ENSMUSG00000018661	ProperStrand	51	chr17	46915391	46916245	protein_coding	Rpl7l1	exon	ENSMUSG00000063888	ProperStrand	37	1	-14.6213
chr14	31989865	31989965	protein_coding	Nisch	exon	ENSMUSG00000021910	ProperStrand	125	chr15	79913288	79913341	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.2951
chr15	76734512	76734528	protein_coding	Rpl8	utr5	ENSMUSG00000003970	NonProperStrand	7	chr1	89673731	89673784	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-7.5185
chr2	167800910	167801939	protein_coding	Ptpn1	exon	ENSMUSG00000027540	ProperStrand	10	chr16	37882963	37882979	protein_coding	Lrrc58	utr3	ENSMUSG00000034158	NonProperStrand	45	3	-inf
chr9	102809285	102809313	protein_coding	Ryk	utr3	ENSMUSG00000032547	ProperStrand	25	chr1	162967513	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-8.5022
chr6	83318070	83318086	protein_coding	Tet3	exon	ENSMUSG00000034832	NonProperStrand	93	chr7	117189863	117189916	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-5.3506
chr15	47163665	47163683	SINE	RSINE1	B4	chr15RSINE147163642	ProperStrand	1	chr4	116827153	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-inf
chr2	109516160	109516176	protein_coding	Bdnf	utr5	ENSMUSG00000048482	NonProperStrand	47	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-6.3242
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	104987835	104987851	protein_coding	Mettl2	exon	ENSMUSG00000020691	ProperStrand	21	1	-6.5250
chr9	64022855	64022923	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	chr10	90581049	90581193	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	2	-1.2204
chr14	52919598	52919661	protein_coding	Mettl3	exon	ENSMUSG00000022160	ProperStrand	54	chr9	120039585	120039674	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.5118
chr5	10236885	10236985	protein_coding	Gm10482	exon	ENSMUSG00000073226	ProperStrand	1	chr4	116826700	116826766	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-inf
chr9	120037990	120038070	protein_coding	Rpsa	intron	ENSMUSG00000032518	NonProperStrand	2	chr9	120037906	120037996	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	NonProperStrand	19	1	-inf
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr11	62418013	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	3	-3.6356
chr11	95926525	95926542	protein_coding	Ube2z	exon	ENSMUSG00000014349	ProperStrand	41	chr2	38860251	38860384	protein_coding	Rpl35	exon	ENSMUSG00000062997	ProperStrand	68	1	-13.8329
chr16	17842701	17842730	protein_coding	Dgcr2	exon	ENSMUSG00000003166	ProperStrand	45	chr9	24118266	24118283	protein_coding	Npsr1	utr3	ENSMUSG00000043659	ProperStrand	1	1	-inf
chr10	112070758	112070776	LINE	L1MA6	L1	chr10L1MA6112070502	ProperStrand	1	chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	1	-inf
chr11	120440629	120440693	protein_coding	Arhgdia	exon	ENSMUSG00000025132	ProperStrand	39	chr1	181027187	181027205	protein_coding	Smyd3	intron	ENSMUSG00000055067	ProperStrand	231	1	-11.4794
chr8	32260910	32260933	protein_coding	Tti2	utr5	ENSMUSG00000031577	ProperStrand	13	chr4	131865856	131865946	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.5141
chr5	34112034	34112050	protein_coding	Letm1	exon	ENSMUSG00000005299	NonProperStrand	145	chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	1	-8.8508
chr18	83156768	83156784	protein_coding	Zfp516	exon	ENSMUSG00000058881	NonProperStrand	15	chr2	145077956	145209255	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-10.5332
chr18	10617890	10623634	protein_coding	Snrpd1	utr5	ENSMUSG00000002477	ProperStrand	6	chr11	6428034	6428087	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-7.7732
chr17	50872537	50872553	protein_coding	Tbc1d5	utr3	ENSMUSG00000023923	NonProperStrand	51	chr5	150421993	150422034	protein_coding	Hsph1	intron	ENSMUSG00000029657	ProperStrand	16	2	-inf
chr10	127999955	128000191	protein_coding	Pa2g4	exon	ENSMUSG00000025364	ProperStrand	72	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-6.8718
chr19	8798484	8798554	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	chr11	106874217	106874254	tRNA	tRNA945-ArgCCG	.	179514	ProperStrand	133	1	-3.6975
chr15	100299885	100299975	protein_coding	Letmd1	intron	ENSMUSG00000037353	NonProperStrand	1	chr4	131908357	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-inf
chr11	98878344	98878457	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	chr5	108334194	108336492	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	7	-2.4045
chr9	78326455	78326535	protein_coding	Eef1a1	utr3	ENSMUSG00000037742	ProperStrand	1990	chr12	110271975	110272065	protein_coding	Begain	exon	ENSMUSG00000040867	ProperStrand	2	1	-13.7788
chr7	38468013	38468033	protein_coding	Zfp536	intron	ENSMUSG00000043456	ProperStrand	57	chr18	12172461	12172477	protein_coding	6030446N20Rik	intron	ENSMUSG00000049411	ProperStrand	235	1	-10.6791
chr11	102067225	102067742	protein_coding	Hdac5	exon	ENSMUSG00000008855	ProperStrand	45	chr9	120038529	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	3	-8.8705
chr8	75006938	75006993	protein_coding	Slc35e1	utr3	ENSMUSG00000019731	ProperStrand	23	chr7	52382752	52382770	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	2	-13.8262
chr3	108232204	108232294	protein_coding	Sars	exon	ENSMUSG00000068739	ProperStrand	45	chr19	8963096	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.7687
chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr17	35089181	35089238	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	4	-1.7319
chr14	85930769	85930786	LTR	MMERVK10C-int	ERVK	chr14MMERVK10C-int85928638	ProperStrand	2	chr18	74938044	74938113	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	ProperStrand	1022	1	-15.1037
chr12	57433878	57433944	protein_coding	Mbip	intron	ENSMUSG00000021028	ProperStrand	15	chr7	116663634	116663734	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-8.4879
chr2	10345746	10345774	protein_coding	Sfmbt2	intron	ENSMUSG00000061186	ProperStrand	17	chr10	23505152	23505277	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.3129
chr10	87892265	87908897	protein_coding	Gnptab	exon	ENSMUSG00000035311	ProperStrand	65	chr16	23111701	23111819	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-5.0312
chr15	76926398	76926436	protein_coding	Rbfox2	intron	ENSMUSG00000033565	ProperStrand	55	chr10	23505152	23505209	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-2.5816
chr7	87873850	87873902	protein_coding	Iqgap1	exon	ENSMUSG00000030536	ProperStrand	43	chr19	8798484	8798522	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-5.8641
chr6	94776857	94776879	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	chr10	39978328	39978418	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-1.6797
chr8	18882711	18882728	protein_coding	Agpat5	utr3	ENSMUSG00000031467	ProperStrand	7	chr15	79913288	79913346	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-12.8181
chr11	45723144	45723160	protein_coding	Clint1	utr3	ENSMUSG00000006169	NonProperStrand	273	chr11	101386637	101386692	protein_coding	Brca1	exon	ENSMUSG00000017146	ProperStrand	51	1	-10.6035
chr16	64770795	64770813	protein_coding	4930453N24Rik	utr5	ENSMUSG00000059920	ProperStrand	39	chr3	123210919	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.7988
chr2	83693562	83693578	protein_coding	Fam171b	exon	ENSMUSG00000048388	NonProperStrand	175	chr11	48615536	48615599	snoRNA	ENSMUSG00000064725_Snord96a	.	ENSMUSG00000064725	ProperStrand	89	1	-10.3733
chr18	73950818	73951319	protein_coding	Me2	exon	ENSMUSG00000024556	ProperStrand	22	chrX	34622940	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-5.0729
chr5	63483109	63483199	LINE	L1Md_A	L1	chr5L1Md_A63479057	ProperStrand	1	chr19	8800355	8800435	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-inf
chr16	53805359	53805379	LTR	RMER17A	ERVK	chr16RMER17A53805156	ProperStrand	1	chr19	8963027	8963166	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-inf
chr12	112534737	112534753	protein_coding	Cdc42bpb	intron	ENSMUSG00000021279	ProperStrand	128	chr5	138227091	138227146	protein_coding	Mepce	exon	ENSMUSG00000029726	ProperStrand	18	1	-14.2322
chr8	48761804	48761821	protein_coding	AA386476	utr3	ENSMUSG00000074357	ProperStrand	4	chr7	29136525	29136599	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-12.8965
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr3	137849424	137849440	protein_coding	4930579F01Rik	utr5	ENSMUSG00000012042	NonProperStrand	156	1	-5.9048
chr3	96654255	96654271	protein_coding	Pdzk1	exon	ENSMUSG00000038298	ProperStrand	101	chr19	27472548	27472631	protein_coding	D19Bwg1357e	intron	ENSMUSG00000041360	ProperStrand	110	1	-11.0497
chr12	102070667	102107184	protein_coding	9030617O03Rik	intron	ENSMUSG00000021185	ProperStrand	12	chr16	23111428	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-13.6410
chr17	36097663	36097764	protein_coding	Abcf1	exon	ENSMUSG00000038762	ProperStrand	206	chr16	18240813	18240937	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	1	-6.6705
chr13	23855552	23855642	protein_coding	Hist1h1a	utr5	ENSMUSG00000049539	ProperStrand	34	chr10	23505156	23505236	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.0925
chr12	47618073	47618163	LTR	RMER6C	ERVK	chr12RMER6C47618091	ProperStrand	1	chr12	47875687	47875777	protein_coding	Nova1	intron	ENSMUSG00000021047	NonProperStrand	3	1	-inf
chr7	87657840	87657872	protein_coding	Blm	exon	ENSMUSG00000030528	ProperStrand	35	chr4	131908689	131908794	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-7.8445
chr4	43505688	43505788	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chrX	113862534	113862572	snoRNA	ENSMUSG00000088518_SNORA9	.	ENSMUSG00000088518	ProperStrand	280	1	-0.7438
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr2	136910405	136910422	protein_coding	Jag1	exon	ENSMUSG00000027276	ProperStrand	15	1	-8.6903
chr14	65338062	65338078	protein_coding	Kif13b	intron	ENSMUSG00000060012	NonProperStrand	6	chr18	35716685	35716759	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-6.6008
chr2	130101986	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	chr2	166890797	166890836	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	1	-2.6374
chr7	4744786	4744810	protein_coding	Rpl28	utr5	ENSMUSG00000030432	ProperStrand	220	chr7	107128612	107128628	protein_coding	Rnf169	exon	ENSMUSG00000058761	ProperStrand	31	1	-12.0422
chr2	155036245	155036276	protein_coding	Itch	exon	ENSMUSG00000027598	ProperStrand	9	chr18	35714195	35714292	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-7.1819
chr17	39985590	39985680	pseudogene	AY036118	.	ENSMUSG00000045999	ProperStrand	57	chr11	69481337	69481417	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.2937
chr6	87930586	87930686	protein_coding	H1fx	utr3	ENSMUSG00000044927	ProperStrand	13	chr19	8798507	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-8.2769
chrX	47934635	47934688	lincRNA	6720401G13Rik	intron	ENSMUSG00000085396	ProperStrand	34	chr4	126559848	126566767	protein_coding	Zmym4	exon	ENSMUSG00000042446	ProperStrand	94	1	-13.5536
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr17	24666750	24666863	protein_coding	Rab26	exon	ENSMUSG00000079657	ProperStrand	11	1	-12.0538
chr15	82034126	82034216	protein_coding	Srebf2	exon	ENSMUSG00000022463	ProperStrand	592	chr2	169945434	169945460	protein_coding	Zfp217	exon	ENSMUSG00000052056	ProperStrand	79	3	-17.9589
chr3	9425821	9425839	lincRNA	C030034L19Rik	intron	ENSMUSG00000085362	ProperStrand	3	chr11	77995215	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-12.5216
chr2	26493361	26493405	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr3	96218374	96218474	misc_RNA	Telomerase-vert	.	ENSMUSG00000064796	ProperStrand	443	1	-2.4550
chr12	83020338	83097281	protein_coding	Pcnx	intron	ENSMUSG00000021140	ProperStrand	32	chr17	24857717	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	4	-11.5803
chr17	71193699	71193758	protein_coding	Tgif1	utr3	ENSMUSG00000047407	ProperStrand	64	chr14	52829459	52829542	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-8.0731
chr18	90712382	90712400	protein_coding	Tmx3	utr3	ENSMUSG00000024614	ProperStrand	10	chr2	158182206	158182277	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	4	-21.3410
chr17	66335501	66335519	protein_coding	Ankrd12	exon	ENSMUSG00000034647	NonProperStrand	2	chr11	101327162	101327262	protein_coding	Vat1	exon	ENSMUSG00000034993	ProperStrand	69	1	-inf
chr11	52197382	52197492	protein_coding	Vdac1	exon	ENSMUSG00000020402	ProperStrand	107	chr4	53873600	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	5	-inf
chr4	138592850	138592891	protein_coding	Tmco4	intron	ENSMUSG00000041143	ProperStrand	47	chr9	103401280	103401296	protein_coding	Tmem108	exon	ENSMUSG00000042757	NonProperStrand	323	1	-10.4322
chr15	97953148	97953325	protein_coding	Pfkm	exon	ENSMUSG00000033065	ProperStrand	8	chr11	97643006	97643034	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	4	-19.5782
chr1	135534159	135534262	protein_coding	Zc3h11a	intron	ENSMUSG00000026464	NonProperStrand	8	chr18	59205898	59205917	protein_coding	Adamts19	intron	ENSMUSG00000053441	NonProperStrand	3	1	-21.9894
chr1	168239525	168239541	protein_coding	Ildr2	exon	ENSMUSG00000040612	ProperStrand	103	chr5	121655017	121655039	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.7697
chr1	34489982	34489999	miRNA	Mir5103	.	ENSMUSG00000092852	NonProperStrand	24	chr13	90238585	90238722	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	1	-10.4977
chr10	6063958	6063977	protein_coding	Akap12	intron	ENSMUSG00000038587	ProperStrand	1008	chr9	15119287	15119397	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	7	-7.0504
chr3	96448481	96448538	protein_coding	Pex11b	utr3	ENSMUSG00000028102	ProperStrand	1	chr4	44162085	44162103	protein_coding	Rnf38	exon	ENSMUSG00000035696	ProperStrand	66	1	-inf
chr9	64004975	64005051	protein_coding	Zwilch	intron	ENSMUSG00000032400	ProperStrand	29	chr11	51551334	51551424	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	6	-20.3833
chr9	42063804	42063855	protein_coding	Sc5d	exon	ENSMUSG00000032018	ProperStrand	19	chr10	23505190	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.1073
chr15	76079452	76079542	protein_coding	Grina	exon	ENSMUSG00000022564	ProperStrand	18	chr18	35714259	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-5.7628
chr12	13476790	13476847	protein_coding	Nbas	exon	ENSMUSG00000020576	ProperStrand	35	chr18	35714160	35714260	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	18	-inf
chr10	80642125	80642192	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr2	113679956	113679972	protein_coding	Arhgap11a	exon	ENSMUSG00000041219	ProperStrand	47	2	-10.6449
chr16	21214960	21215050	protein_coding	Ephb3	exon	ENSMUSG00000005958	ProperStrand	23	chr10	110918549	110918629	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-5.2814
chr5	74489211	74489291	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr5	147647256	147647495	protein_coding	Rpl21	exon	ENSMUSG00000041453	ProperStrand	112	3	-10.5741
chr8	12757418	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr15	79913288	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	3	-1.2381
chr13	9833569	9833658	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr19	44188501	44188581	snoRNA	ENSMUSG00000077391_SNORA12	.	ENSMUSG00000077391	ProperStrand	506	5	-7.1936
chr2	165880065	165897935	protein_coding	Ncoa3	utr3	ENSMUSG00000027678	ProperStrand	58	chr4	131908266	131908353	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-2.7668
chr5	135097032	135097049	protein_coding	Eif4h	utr3	ENSMUSG00000040731	NonProperStrand	3	chr16	23110966	23110983	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chrX	71517823	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	chrX	34622924	34623024	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	11	-1.3343
chr11	6428060	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr11	116533824	116533892	snoRNA	ENSMUSG00000065640_Snord1c	.	ENSMUSG00000065640	ProperStrand	373	4	-2.9710
chr3	10437966	10437982	protein_coding	Snx16	exon	ENSMUSG00000027534	NonProperStrand	3	chr17	13115655	13115736	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	1	-13.8927
chr2	130462030	130462070	protein_coding	Prosapip1	exon	ENSMUSG00000037703	ProperStrand	11	chr16	23110909	23111010	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.6241
chr6	51416343	51416388	protein_coding	Hnrnpa2b1	exon	ENSMUSG00000004980	ProperStrand	166	chr12	85515169	85515269	protein_coding	C130039O16Rik	utr5	ENSMUSG00000042507	ProperStrand	75	1	-10.8227
chr13	113591291	113591320	protein_coding	Ppap2a	utr5	ENSMUSG00000021759	ProperStrand	4	chr3	89577795	89577895	protein_coding	Ube2q1	exon	ENSMUSG00000042572	ProperStrand	32	1	-19.2592
chr14	63287575	63287615	protein_coding	Serpine3	intron	ENSMUSG00000091155	ProperStrand	210	chr9	64143748	64143848	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-5.3037
chr10	10673954	10673971	protein_coding	Grm1	intron	ENSMUSG00000019828	ProperStrand	38	chrX	84483704	84483737	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-9.1667
chr6	142438821	142438841	protein_coding	Ldhb	utr3	ENSMUSG00000030246	ProperStrand	224	chr1	162967515	162967566	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-2.4756
chr5	143874599	143874615	protein_coding	Rnf216	utr5	ENSMUSG00000045078	NonProperStrand	29	chr4	131865913	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.9946
chr1	45488603	45488620	protein_coding	Col5a2	intron	ENSMUSG00000026042	ProperStrand	184	chr9	20699542	20699598	protein_coding	Eif3g	exon	ENSMUSG00000070319	ProperStrand	38	1	-11.9877
chr2	32162200	32162216	protein_coding	Golga2	utr3	ENSMUSG00000002546	NonProperStrand	35	chr8	125961732	125961749	protein_coding	Gm20388	intron	ENSMUSG00000092329	ProperStrand	295	1	-11.2088
chr13	46765144	46765160	protein_coding	C78339	exon	ENSMUSG00000069237	NonProperStrand	104	chr7	116663696	116663758	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.6231
chr11	94189249	94189271	Low_complexity	GC_rich	Low_complexity	chr11GC_rich94189251	ProperStrand	5	chr4	56910496	56910615	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	5	-inf
chr7	54443263	54443353	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	chr1	79603793	79603873	protein_coding	Ap1s3	utr3	ENSMUSG00000054702	ProperStrand	4	1	-15.4130
chr5	116013320	116013392	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	chr8	73419657	73419741	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-0.7384
chr3	8509555	8541845	protein_coding	Stmn2	utr5	ENSMUSG00000027500	ProperStrand	16	chr4	88005241	88005788	protein_coding	BC057079	exon	ENSMUSG00000038368	ProperStrand	52	2	-23.5183
chr4	83651782	83651872	LINE	L1M2	L1	chr4L1M283651627	ProperStrand	1	chr4	83651964	83652054	SINE	ID	ID	chr4ID83651985	ProperStrand	1	1	-inf
chr17	85482653	85489599	protein_coding	Prepl	utr5	ENSMUSG00000024127	ProperStrand	106	chr19	8963082	8963113	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-2.6298
chr9	63066908	63066926	protein_coding	Map2k5	intron	ENSMUSG00000058444	NonProperStrand	79	chr7	4691730	4691754	protein_coding	Suv420h2	utr5	ENSMUSG00000059851	NonProperStrand	70	1	-12.4512
chr4	11098087	11098187	protein_coding	Trp53inp1	utr3	ENSMUSG00000028211	ProperStrand	35	chr8	74008400	74008417	protein_coding	Ano8	exon	ENSMUSG00000034863	NonProperStrand	171	1	-12.3001
chr9	30235085	30235101	protein_coding	Snx19	exon	ENSMUSG00000031993	ProperStrand	353	chr5	145564038	145564129	protein_coding	Trrap	exon	ENSMUSG00000045482	ProperStrand	399	1	-6.0001
chr7	51828028	51828044	protein_coding	Napsa	exon	ENSMUSG00000002204	ProperStrand	88	chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-5.7007
chr3	130431984	130432003	protein_coding	Rpl34	exon	ENSMUSG00000062006	ProperStrand	51	chr11	69483137	69483274	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-4.7757
chr10	92152411	92152433	protein_coding	Nedd1	exon	ENSMUSG00000019988	ProperStrand	7	chr8	109675201	109675287	protein_coding	Cyb5b	intron	ENSMUSG00000031924	ProperStrand	39	1	-18.1033
chr4	155002908	155002932	protein_coding	Cdk11b	exon	ENSMUSG00000029062	ProperStrand	92	chr3	95980313	95980410	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-6.0133
chr11	119207004	119207020	protein_coding	Sgsh	utr3	ENSMUSG00000005043	ProperStrand	67	chr18	35716788	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.9899
chr2	147009105	147009122	protein_coding	Nkx2-2	utr3	ENSMUSG00000027434	NonProperStrand	84	chr10	56108426	56108516	protein_coding	Gja1	utr3	ENSMUSG00000050953	ProperStrand	70	1	-12.3282
chrX	71589886	71589903	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr10	23505559	23505621	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	3	-10.6501
chr15	89133465	89133522	protein_coding	Sbf1	exon	ENSMUSG00000036529	ProperStrand	85	chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	1	-7.4147
chr1	45488603	45488620	protein_coding	Col5a2	intron	ENSMUSG00000026042	ProperStrand	184	chr17	71990923	71990999	snoRNA	ENSMUSG00000092713_CT010429.1	.	ENSMUSG00000092713	ProperStrand	182	1	-8.8423
chr9	120037599	120037657	protein_coding	Rpsa	utr5	ENSMUSG00000032518	ProperStrand	398	chr13	23853909	23853951	protein_coding	Hist1h3a	exon	ENSMUSG00000069265	ProperStrand	12	2	-20.8536
chr11	87794313	87794403	protein_coding	Dynll2	utr3	ENSMUSG00000020483	ProperStrand	22	chr5	130300438	130300518	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.3511
chr17	25296587	25296603	protein_coding	Clcn7	exon	ENSMUSG00000036636	ProperStrand	94	chr11	6428108	6428169	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.4052
chr11	67167096	67167112	protein_coding	Myh13	exon	ENSMUSG00000060180	ProperStrand	145	chr12	106269425	106269445	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-2.5415
chr9	30235085	30235102	protein_coding	Snx19	exon	ENSMUSG00000031993	ProperStrand	353	chr2	169940034	169940131	protein_coding	Zfp217	exon	ENSMUSG00000052056	ProperStrand	79	1	-9.2111
chr11	83107827	83107903	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	chr2	166890502	166890547	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-3.2490
chr1	36373059	36373076	protein_coding	Arid5a	exon	ENSMUSG00000037447	ProperStrand	3	chr5	74489543	74489633	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-10.0122
chr2	22444639	22445135	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	chr19	8800377	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	6	-1.9874
chr17	75790277	75790293	protein_coding	Ltbp1	utr3	ENSMUSG00000001870	NonProperStrand	66	chr8	73419561	73419599	protein_coding	Rpl18a	exon	ENSMUSG00000045128	ProperStrand	394	1	-9.3524
chr2	90235298	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	136614841	136615335	protein_coding	Alkbh4	utr5	ENSMUSG00000039754	ProperStrand	40	1	-5.2466
chr10	127496314	127505732	protein_coding	Ptges3	utr5	ENSMUSG00000071072	ProperStrand	89	chr12	106269289	106269389	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-3.4067
chr5	29963799	29963817	protein_coding	Ube3c	intron	ENSMUSG00000039000	ProperStrand	48	chr3	68889067	68889214	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	NonProperStrand	26	1	-15.4308
chr7	108440949	108440967	protein_coding	Atg16l2	intron	ENSMUSG00000047767	ProperStrand	121	chr6	40123350	40123367	protein_coding	Gm5567	intron	ENSMUSG00000057716	ProperStrand	25	1	-13.6727
chr2	32818179	32818535	protein_coding	Rpl12	exon	ENSMUSG00000038900	ProperStrand	167	chr1	162967510	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-1.7282
chr15	36538315	36538384	protein_coding	Pabpc1	utr5	ENSMUSG00000022283	ProperStrand	908	chr5	44136592	44136682	protein_coding	Fbxl5	intron	ENSMUSG00000039753	ProperStrand	18	1	-10.3179
chr7	123451598	123451769	protein_coding	Plekha7	exon	ENSMUSG00000045659	ProperStrand	66	chr16	23110539	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-6.1770
chr17	6947134	6947161	protein_coding	Ezr	exon	ENSMUSG00000052397	ProperStrand	126	chr9	15118246	15118322	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-2.1687
chr1	179675533	179675613	protein_coding	1700016C15Rik	intron	ENSMUSG00000015962	NonProperStrand	15	chr10	23505155	23505245	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	10	-inf
chr17	57162082	57162162	protein_coding	Khsrp	utr3	ENSMUSG00000007670	ProperStrand	353	chr6	149134379	149134469	protein_coding	Amn1	intron	ENSMUSG00000068250	ProperStrand	10	1	-13.4306
mmu-miR-6240	1	25	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr2	10392503	10392555	protein_coding	Sfmbt2	intron	ENSMUSG00000061186	ProperStrand	17	1	-8.4333
chr16	23110986	23111010	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr2	155121155	155121204	protein_coding	Pigu	intron	ENSMUSG00000038383	ProperStrand	14	1	-11.9738
chr13	49300631	49300658	protein_coding	1110007C09Rik	utr5	ENSMUSG00000037960	ProperStrand	5	chr17	13112533	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-9.6638
chr17	68152281	68152337	protein_coding	Lama1	exon	ENSMUSG00000032796	ProperStrand	168	chr14	64081493	64081511	protein_coding	Fam167a	utr3	ENSMUSG00000035095	ProperStrand	80	1	-10.6691
chr12	113843063	113843647	protein_coding	Inf2	exon	ENSMUSG00000037679	ProperStrand	12	chr3	123210852	123210952	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.0354
chr6	86368874	86369099	protein_coding	Tia1	exon	ENSMUSG00000071337	ProperStrand	5	chr7	118219575	118219613	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-9.2324
chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr2	150095904	150095920	protein_coding	Gm14124	utr3	ENSMUSG00000079008	NonProperStrand	18	1	-5.9221
chrX	82414501	82414591	protein_coding	Dmd	intron	ENSMUSG00000045103	ProperStrand	38	chr11	69483136	69483189	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	8	-inf
chrX	34622906	34622924	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	chr13	90238622	90238722	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	4	-1.4120
chr3	104453308	104453366	protein_coding	Slc16a1	exon	ENSMUSG00000032902	ProperStrand	48	chr10	23505152	23505178	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-2.9082
chr11	54435886	54435905	protein_coding	Rapgef6	exon	ENSMUSG00000037533	ProperStrand	27	chr7	116664836	116664926	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-4.0017
chr15	78259253	78259269	protein_coding	Kctd17	exon	ENSMUSG00000033287	NonProperStrand	26	chr2	145076805	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-9.4069
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr7	103885924	103885940	protein_coding	Odz4	exon	ENSMUSG00000048078	NonProperStrand	15	1	-11.4082
chr2	5820986	5853584	protein_coding	Dhtkd1	exon	ENSMUSG00000025815	ProperStrand	46	chr4	131865385	131865502	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	4	-14.3635
chr7	52890958	52891041	protein_coding	Rasip1	intron	ENSMUSG00000044562	ProperStrand	14	chr19	8963087	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.9719
chr6	119987215	119987296	protein_coding	Wnk1	exon	ENSMUSG00000045962	ProperStrand	221	chr11	6428035	6428076	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.1088
chr13	8766516	8766606	protein_coding	Adarb2	utr3	ENSMUSG00000052551	NonProperStrand	61	chr9	120038471	120038551	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.0095
chr9	63868722	63868738	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	chr1	59761124	59761155	snoRNA	ENSMUSG00000089512_SNORD11	.	ENSMUSG00000089512	ProperStrand	43	1	-9.2561
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr5	151755616	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	5	-9.0469
chr4	131908356	131908461	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr9	22228797	22228813	protein_coding	Rp9	intron	ENSMUSG00000032239	ProperStrand	7	3	-inf
chr17	46861595	46861611	protein_coding	Pex6	exon	ENSMUSG00000002763	ProperStrand	292	chr18	36720529	36720595	protein_coding	Ankhd1	utr5	ENSMUSG00000024483	ProperStrand	56	1	-10.2806
chr6	143153680	143153724	protein_coding	Etnk1	utr3	ENSMUSG00000030275	ProperStrand	61	chr8	73419657	73419757	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	5	-13.6227
chr1	58978623	58980372	protein_coding	Trak2	exon	ENSMUSG00000026028	ProperStrand	13	chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	4	-inf
chr11	55296272	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	chr2	130103781	130103808	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-1.7611
chr8	4295365	4295447	protein_coding	Elavl1	exon	ENSMUSG00000040028	ProperStrand	39	chr11	62416593	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-6.0112
chr14	15572352	15572370	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-5.0000
chr14	118283449	118283465	protein_coding	Gpc6	intron	ENSMUSG00000058571	NonProperStrand	31	chr4	131865933	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.8751
chr2	90235307	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	148600770	148600786	LTR	MTC	MaLR	chr5MTC148600759	ProperStrand	1	1	-inf
chr9	44123303	44123448	protein_coding	C2cd2l	exon	ENSMUSG00000032120	ProperStrand	8	chr17	28292259	28292276	protein_coding	Scube3	intron	ENSMUSG00000038677	ProperStrand	13	1	-19.2024
chrX	54046219	54046306	protein_coding	Fhl1	utr3	ENSMUSG00000023092	ProperStrand	6	chr3	123210872	123210962	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-6.4760
chr8	123029790	123029807	protein_coding	Gse1	intron	ENSMUSG00000031822	ProperStrand	97	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-4.9074
chr11	6299822	6299845	protein_coding	Zmiz2	exon	ENSMUSG00000041164	ProperStrand	69	chr4	131908688	131908810	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.0398
chr5	24377323	24377340	protein_coding	Prkag2	exon	ENSMUSG00000028944	ProperStrand	6	chr16	23111430	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-5.4240
chr8	13416897	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr6	125111938	125112038	protein_coding	Gapdh	utr3	ENSMUSG00000057666	ProperStrand	356	1	-3.0654
chr3	107938746	107938764	protein_coding	Gnai3	intron	ENSMUSG00000000001	ProperStrand	48	chr16	23110455	23110538	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.8496
chr1	182868186	182868219	protein_coding	Lefty1	utr3	ENSMUSG00000038793	ProperStrand	28	chr7	117166786	117166857	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-6.3125
mmu-miR-6240	4	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr11	75578755	75578819	protein_coding	Ywhae	utr3	ENSMUSG00000020849	ProperStrand	176	1	-3.8374
chr11	96680251	96680341	protein_coding	Nfe2l1	utr3	ENSMUSG00000038615	ProperStrand	118	chr15	79908937	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-4.1723
chr13	46845444	46845504	protein_coding	Kif13a	utr3	ENSMUSG00000021375	ProperStrand	466	chr5	115939526	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-3.8767
mmu-miR-709	0	19	miRNA	mmu-miR-709	.	mmu-miR-709	ProperStrand	20	chr10	128141782	128141798	protein_coding	Cdk2	exon	ENSMUSG00000025358	ProperStrand	19	1	-17.9676
chr12	55796767	55796784	protein_coding	Eapp	utr5	ENSMUSG00000054302	NonProperStrand	62	chr18	75161533	75161560	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-7.1378
chr11	98865243	98865494	protein_coding	Top2a	exon	ENSMUSG00000020914	ProperStrand	324	chr5	130300533	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	6	-4.1843
chr7	52309977	52309993	protein_coding	Prrg2	exon	ENSMUSG00000007837	NonProperStrand	281	chr6	115758011	115758047	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-2.5995
chr3	82816757	82816774	protein_coding	Fgg	exon	ENSMUSG00000033860	NonProperStrand	321	chr18	35714143	35714258	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-0.8218
chr4	129662259	129662276	protein_coding	Bai2	utr5	ENSMUSG00000028782	ProperStrand	119	chr4	116826717	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-5.4353
chr2	90235287	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	118602039	118602057	protein_coding	Cacna1c	exon	ENSMUSG00000051331	NonProperStrand	49	1	-4.8520
chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	chr9	110541349	110541812	protein_coding	Nbeal2	exon	ENSMUSG00000056724	ProperStrand	161	1	-5.0473
chr7	13610253	13610366	protein_coding	Trim28	exon	ENSMUSG00000005566	ProperStrand	296	chr7	146684406	146684425	protein_coding	Inpp5a	intron	ENSMUSG00000025477	ProperStrand	166	1	-8.0793
chr5	103854542	103891155	protein_coding	Ptpn13	utr5	ENSMUSG00000034573	NonProperStrand	74	chr4	131865458	131865493	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-3.6110
chr7	27466699	27466715	protein_coding	Cyp2b23	exon	ENSMUSG00000040650	ProperStrand	39	chr15	34370545	34370645	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-4.3595
chr7	52256115	52256155	protein_coding	Irf3	exon	ENSMUSG00000003184	ProperStrand	1	chr19	8963116	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-inf
chrX	149827752	149827825	protein_coding	Klf8	utr3	ENSMUSG00000041649	ProperStrand	7	chr11	62416631	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-9.5351
chr19	37975774	37975848	protein_coding	Myof	exon	ENSMUSG00000048612	ProperStrand	37	chr9	64023265	64023285	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	1	-9.4173
chr17	56402273	56402325	protein_coding	Fem1a	utr3	ENSMUSG00000043683	ProperStrand	11	chr10	23505152	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-7.0732
chr10	86221857	86221873	protein_coding	BC030307	exon	ENSMUSG00000044937	ProperStrand	77	chr17	35089182	35089258	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-5.0002
chr15	98481418	98481695	protein_coding	Ddx23	exon	ENSMUSG00000003360	ProperStrand	63	chr1	187234094	187235095	protein_coding	Eprs	exon	ENSMUSG00000026615	ProperStrand	149	1	-11.3899
chr14	15572352	15572371	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr9	15118247	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	5	-8.9677
chr3	88714287	88714305	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-2.0234
chr1	134896748	134896849	protein_coding	Mdm4	intron	ENSMUSG00000054387	ProperStrand	95	chr7	29136614	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-3.0205
chr7	135586138	135587330	protein_coding	Tial1	exon	ENSMUSG00000030846	ProperStrand	25	chr17	37146523	37146591	protein_coding	Zfp57	exon	ENSMUSG00000036036	ProperStrand	39	1	-15.9312
chr17	56107026	56107044	protein_coding	Ccdc94	exon	ENSMUSG00000003208	ProperStrand	14	chr4	140592609	140592643	protein_coding	Crocc	exon	ENSMUSG00000040860	ProperStrand	44	1	-16.9493
chr18	73693113	73693148	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr9	15119993	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	2	-1.1889
chr17	56257328	56257344	LTR	RLTR25B	ERVK	chr17RLTR25B56257276	NonProperStrand	75	chr17	35822057	35822257	protein_coding	Ddr1	exon	ENSMUSG00000003534	ProperStrand	129	1	-11.3278
chr6	29155057	29155105	protein_coding	Impdh1	exon	ENSMUSG00000003500	ProperStrand	20	chr18	35714148	35714238	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-5.5524
chr16	19478879	19478969	LINE	Lx2	L1	chr16Lx219478895	ProperStrand	1	chr4	29403941	29404021	LTR	RMER13A	ERVK	chr4RMER13A29403714	ProperStrand	1	1	-inf
chr16	90230478	90242816	protein_coding	Scaf4	exon	ENSMUSG00000022983	ProperStrand	44	chr1	162968213	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-7.4346
chr15	57926750	57926803	protein_coding	Atad2	utr3	ENSMUSG00000022360	ProperStrand	47	chr18	35714194	35714216	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	4	-12.7800
chrX	92639492	92639514	protein_coding	Fam123b	intron	ENSMUSG00000050332	ProperStrand	57	chr11	103043025	103043042	protein_coding	Fmnl1	exon	ENSMUSG00000055805	ProperStrand	26	2	-20.0181
chr11	87236511	87236536	protein_coding	Tex14	intron	ENSMUSG00000010342	ProperStrand	41	chr19	8963086	8963194	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.9336
chr14	28272978	28272994	protein_coding	D14Abb1e	exon	ENSMUSG00000040651	ProperStrand	49	chr9	120038467	120038530	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.4063
chr19	36116704	36116721	protein_coding	Htr7	intron	ENSMUSG00000024798	NonProperStrand	3	chr5	121655016	121655065	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-9.9796
mmu-miR-6240	1	25	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr18	6490808	6490825	protein_coding	Epc1	utr5	ENSMUSG00000024240	ProperStrand	9	1	-9.7556
chr5	137403322	137403344	lincRNA	4933404O12Rik	intron	ENSMUSG00000085062	NonProperStrand	11	chr5	121655016	121655095	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-7.0917
chr10	116508069	116515921	protein_coding	Frs2	utr3	ENSMUSG00000020170	ProperStrand	10	chr4	131908236	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-7.7635
chr1	93342189	93345290	protein_coding	Per2	exon	ENSMUSG00000055866	ProperStrand	114	chr11	62416598	62416627	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-6.6243
chr11	55296243	55296365	protein_coding	G3bp1	intron	ENSMUSG00000018583	ProperStrand	106	chr17	34606118	34606134	protein_coding	Btnl4	exon	ENSMUSG00000058435	ProperStrand	1	1	-inf
chr9	78023107	78023159	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr3	67393827	67396493	protein_coding	Mfsd1	exon	ENSMUSG00000027775	ProperStrand	15	1	-8.6640
chr13	96374713	96374729	protein_coding	F2r	exon	ENSMUSG00000048376	NonProperStrand	88	chr19	8799579	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-6.0105
chr5	77739640	77744880	protein_coding	Polr2b	exon	ENSMUSG00000029250	ProperStrand	68	chr16	23110553	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.2508
chr13	98265554	98265634	lincRNA	Gm11019	exon	ENSMUSG00000078952	ProperStrand	113	chr9	64024477	64024567	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	3	-15.9813
chr13	9608270	9608297	protein_coding	Dip2c	exon	ENSMUSG00000048264	ProperStrand	27	chr4	131866177	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-5.1937
chr1	52182350	52182375	protein_coding	Stat1	intron	ENSMUSG00000026104	ProperStrand	5	chr17	24857727	24857779	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-11.8657
chr9	53199801	53199817	protein_coding	Kdelc2	intron	ENSMUSG00000034487	ProperStrand	3	chr2	26494708	26494762	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-9.2771
chr2	49602859	49602876	protein_coding	Kif5c	intron	ENSMUSG00000026764	NonProperStrand	4	chr4	3762661	3762712	protein_coding	Rps20	utr5	ENSMUSG00000028234	ProperStrand	71	1	-18.7270
chr19	9038618	9038842	protein_coding	Tut1	exon	ENSMUSG00000071645	ProperStrand	12	chr16	23110828	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-6.8317
chr11	21040584	21040600	protein_coding	Peli1	exon	ENSMUSG00000020134	ProperStrand	69	chr17	27559700	27559717	protein_coding	Grm4	utr3	ENSMUSG00000063239	ProperStrand	147	1	-11.2337
chr1	173433171	173433271	protein_coding	B930036N10Rik	utr3	ENSMUSG00000091993	ProperStrand	150	chr1	63225259	63225322	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	3	-15.8755
chr4	148532179	148534207	protein_coding	Pgd	exon	ENSMUSG00000028961	ProperStrand	34	chr19	8799855	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	3	-13.9915
chr16	5087987	5088067	protein_coding	Ppl	exon	ENSMUSG00000039457	ProperStrand	37	chr3	68889026	68889116	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-4.1568
chrX	40944841	40944857	protein_coding	Gm362	exon	ENSMUSG00000078320	ProperStrand	129	chr2	22444457	22444504	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-6.2590
chr15	76220509	76220556	protein_coding	Heatr7a	utr5	ENSMUSG00000022558	ProperStrand	48	chr15	79913288	79913328	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.0091
chr1	46133009	46133028	protein_coding	Dnahc7b	intron	ENSMUSG00000041144	NonProperStrand	57	chr12	17552996	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	3	-12.1824
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	1	-4.5456
chr3	89658989	89659007	protein_coding	She	utr3	ENSMUSG00000046280	ProperStrand	3	chr2	130102020	130102087	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-11.6725
chr5	74489202	74489292	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr2	26493390	26493468	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	16	-2.6939
chr11	67120023	67120100	protein_coding	Myh8	intron	ENSMUSG00000055775	NonProperStrand	4	chr10	90582437	90584752	protein_coding	Slc25a3	exon	ENSMUSG00000061904	ProperStrand	74	1	-18.5265
chr7	108971290	108971306	protein_coding	Inppl1	utr3	ENSMUSG00000032737	ProperStrand	272	chr8	72287172	72287188	protein_coding	Zfp866	utr3	ENSMUSG00000043090	NonProperStrand	134	1	-8.6741
chr13	107737212	107737228	protein_coding	Dimt1	utr5	ENSMUSG00000021692	ProperStrand	185	chr1	94840342	94840372	protein_coding	Capn10	exon	ENSMUSG00000026270	ProperStrand	32	1	-12.3245
chr17	12884023	12884123	protein_coding	Igf2r	exon	ENSMUSG00000023830	ProperStrand	151	chr7	29136554	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	10	-16.1282
chr1	17082131	17087389	protein_coding	Jph1	exon	ENSMUSG00000042686	ProperStrand	39	chr11	98878377	98878457	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-7.1408
chr2	24950603	24950620	protein_coding	Noxa1	utr5	ENSMUSG00000036805	NonProperStrand	1	chr15	98350179	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-inf
chr7	52238909	52241677	protein_coding	Prmt1	exon	ENSMUSG00000052429	ProperStrand	21	chr16	23110970	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.9373
chr11	102060738	102060754	protein_coding	Hdac5	exon	ENSMUSG00000008855	NonProperStrand	39	chr7	150717368	150717425	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-6.3557
chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-5.4163
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr2	59712316	59712378	protein_coding	Wdsub1	exon	ENSMUSG00000026988	ProperStrand	3	1	-14.3413
chr2	141476891	141476971	protein_coding	Macrod2	intron	ENSMUSG00000068205	NonProperStrand	20	chr2	76005256	76005346	protein_coding	Pde11a	intron	ENSMUSG00000075270	ProperStrand	11	1	-18.9447
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr7	4745137	4745189	protein_coding	Rpl28	exon	ENSMUSG00000030432	ProperStrand	220	1	-4.3936
chr3	22112075	22112097	protein_coding	Tbl1xr1	utr3	ENSMUSG00000027630	ProperStrand	44	chr19	8963086	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	4	-9.9225
chr11	102467206	102467298	protein_coding	Fzd2	exon	ENSMUSG00000050288	ProperStrand	15	chr1	162965999	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-6.3018
chr16	34028191	34028756	protein_coding	Kalrn	exon	ENSMUSG00000061751	ProperStrand	135	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-3.6699
chr13	25002679	25002738	protein_coding	Aldh5a1	utr3	ENSMUSG00000035936	ProperStrand	13	chr9	120038553	120038643	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	3	-14.0636
chr3	103084279	103084359	protein_coding	Trim33	exon	ENSMUSG00000033014	ProperStrand	55	chr4	131865894	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.9045
chr19	5799766	5799831	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr9	64024469	64024559	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	1	-2.8173
chr5	8723235	8726781	protein_coding	Abcb1a	exon	ENSMUSG00000040584	ProperStrand	12	chr7	118219594	118219627	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-7.3600
chr11	78313939	78313956	protein_coding	Vtn	exon	ENSMUSG00000017344	ProperStrand	188	chr5	121655029	121655050	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-1.7742
chr8	130676173	130676263	LINE	L1M2	L1	chr8L1M2130675942	NonProperStrand	1	chr8	130676597	130676677	LINE	L1_Rod	L1	chr8L1_Rod130676253	NonProperStrand	1	1	-inf
chr2	104504974	104504990	protein_coding	Cstf3	exon	ENSMUSG00000027176	ProperStrand	19	chr2	130102051	130102102	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-7.6478
chr2	89368462	89368479	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	chr7	117189884	117190015	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	6	-7.9000
chr1	187149531	187149595	protein_coding	Iars2	intron	ENSMUSG00000026618	ProperStrand	68	chr11	55296255	55296275	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-5.9335
chr19	42108437	42108498	protein_coding	Ubtd1	utr3	ENSMUSG00000025171	ProperStrand	14	chr11	62418050	62418091	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	3	-19.0674
chr19	4151474	4151640	protein_coding	Coro1b	exon	ENSMUSG00000024835	ProperStrand	13	chr11	69481339	69481410	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-6.1585
chr16	11417565	11417665	protein_coding	Snx29	intron	ENSMUSG00000071669	ProperStrand	10	chr14	31827479	31827545	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-10.5919
chr12	54415353	54415369	protein_coding	Npas3	intron	ENSMUSG00000021010	ProperStrand	15	chr4	133090164	133090228	protein_coding	Nudc	exon	ENSMUSG00000028851	ProperStrand	80	1	-15.5539
chr2	24718824	24718914	protein_coding	Ehmt1	exon	ENSMUSG00000036893	ProperStrand	45	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.2312
chr9	53000106	53000129	protein_coding	Ddx10	intron	ENSMUSG00000053289	NonProperStrand	5	chr4	116828379	116828421	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-13.5419
chr12	84438709	84438728	protein_coding	Dpf3	intron	ENSMUSG00000021221	NonProperStrand	4	chr9	96124978	96125099	protein_coding	Tfdp2	intron	ENSMUSG00000032411	ProperStrand	95	1	-17.8524
chr12	3968611	3968627	protein_coding	Efr3b	exon	ENSMUSG00000020658	ProperStrand	142	chr16	23110455	23110509	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.1415
chr4	103385960	103385976	protein_coding	Dab1	intron	ENSMUSG00000028519	ProperStrand	19	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.4761
chr8	22083474	22083492	protein_coding	AY761185	utr3	ENSMUSG00000079120	ProperStrand	1	chr7	52378398	52378457	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	1	-inf
chr7	87856702	87856749	protein_coding	Iqgap1	utr3	ENSMUSG00000030536	ProperStrand	43	chr9	15118332	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-6.8713
chr5	123256264	123256298	protein_coding	Anapc5	exon	ENSMUSG00000029472	ProperStrand	92	chr8	13466832	13466848	protein_coding	Gas6	exon	ENSMUSG00000031451	ProperStrand	27	1	-14.0719
chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	chr1	162968441	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-2.1522
chr16	91636334	91636385	protein_coding	Gart	exon	ENSMUSG00000022962	ProperStrand	200	chr7	134671464	134671517	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	3	-12.7559
chr16	93884808	93885604	protein_coding	Chaf1b	exon	ENSMUSG00000022945	ProperStrand	28	chr16	76290355	76290372	protein_coding	Nrip1	utr3	ENSMUSG00000048490	NonProperStrand	9	2	-20.2824
chr7	13516149	13516206	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr11	80415108	80415125	protein_coding	Myo1d	exon	ENSMUSG00000035441	ProperStrand	144	1	-6.9231
chr15	34167939	34167955	protein_coding	Laptm4b	utr5	ENSMUSG00000022257	ProperStrand	24	chr15	82980074	82980134	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-8.9814
chr12	39557786	39557802	protein_coding	Etv1	exon	ENSMUSG00000004151	NonProperStrand	13	chr13	23663564	23663664	protein_coding	Hist1h2bg	exon	ENSMUSG00000058385	ProperStrand	29	1	-18.0645
chr5	111082719	111082736	protein_coding	Ddx51	exon	ENSMUSG00000029504	ProperStrand	54	chr7	137933828	137933844	protein_coding	Fgfr2	intron	ENSMUSG00000030849	ProperStrand	100	1	-12.5006
chr12	99997958	99998048	protein_coding	Zc3h14	exon	ENSMUSG00000021012	ProperStrand	27	chr16	23110874	23110954	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.1875
chr4	86501843	86501917	protein_coding	Rps6	exon	ENSMUSG00000028495	ProperStrand	263	chr6	85396316	85396348	protein_coding	Smyd5	utr3	ENSMUSG00000033706	ProperStrand	107	5	-20.2960
chr9	11220007	11220087	LINE	L1_Mur3	L1	chr9L1_Mur311219808	ProperStrand	1	chr9	40140744	40140834	lincRNA	1700110K17Rik	intron	ENSMUSG00000087047	ProperStrand	1	1	-inf
chr3	6423585	6423675	LINE	L1_Mus1	L1	chr3L1_Mus16423421	ProperStrand	1	chr3	6423845	6423935	LINE	Lx	L1	chr3Lx6423869	ProperStrand	1	1	-inf
chr7	150475995	150476012	protein_coding	Kcnq1	intron	ENSMUSG00000009545	ProperStrand	59	chr6	115758011	115758132	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-5.5048
chr19	10344418	10344435	protein_coding	Dagla	intron	ENSMUSG00000035735	ProperStrand	23	chr1	24621182	24621223	protein_coding	Gm10925	utr3	ENSMUSG00000090378	ProperStrand	320	1	-11.8997
chr5	143135578	143139016	protein_coding	Wipi2	exon	ENSMUSG00000029578	ProperStrand	49	chr9	15119657	15119726	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.9863
chr19	5843355	5843397	non_coding	Neat1	.	ENSMUSG00000092274	ProperStrand	63	chr5	74489543	74489633	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-3.6872
chr16	17652264	17652313	protein_coding	Med15	exon	ENSMUSG00000012114	ProperStrand	24	chrX	54318874	54318891	protein_coding	Htatsf1	exon	ENSMUSG00000067873	NonProperStrand	9	1	-19.3656
chr2	90235299	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	117821501	117821517	protein_coding	Zfp239	exon	ENSMUSG00000042097	ProperStrand	6	1	-9.1372
chr2	71725353	71725433	protein_coding	Pdk1	intron	ENSMUSG00000006494	ProperStrand	37	chr9	120038498	120038588	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.9292
chr8	34911964	34912042	protein_coding	Rbpms	intron	ENSMUSG00000031586	ProperStrand	58	chr10	23505190	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.2798
chr18	74377453	74377519	protein_coding	Cxxc1	exon	ENSMUSG00000024560	ProperStrand	44	chr7	116664840	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.0957
chr4	131865853	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr11	106362619	106362694	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	52	-inf
chr5	147546795	147546835	protein_coding	Usp12	utr3	ENSMUSG00000029640	ProperStrand	39	chr7	52650171	52650908	protein_coding	Snrnp70	utr5	ENSMUSG00000063511	ProperStrand	61	1	-14.1418
chr1	162966189	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	chr1	162966812	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	2	-2.2580
chr5	35440839	35440892	protein_coding	Lrpap1	exon	ENSMUSG00000029103	ProperStrand	43	chr7	118219575	118219604	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-7.9666
chr12	17552942	17552997	protein_coding	Odc1	intron	ENSMUSG00000011179	ProperStrand	173	chr6	124665469	124665499	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	1	-4.8613
chr1	89136620	89136638	protein_coding	Eif4e2	utr3	ENSMUSG00000026254	ProperStrand	26	chr2	130101987	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	4	-19.7536
chr9	64023228	64023286	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	chr17	35089181	35089210	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-1.2258
chr18	68397890	68397910	protein_coding	D18Ertd653e	intron	ENSMUSG00000024544	ProperStrand	16	chr7	29136552	29136599	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.8105
chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr3	108218325	108218341	protein_coding	Celsr2	exon	ENSMUSG00000068740	NonProperStrand	20	1	-8.6604
chr11	94897578	94897646	protein_coding	Pdk2	intron	ENSMUSG00000038967	ProperStrand	2	chr7	117166750	117166850	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-12.2088
chr5	110758682	110759957	protein_coding	Pole	exon	ENSMUSG00000007080	ProperStrand	125	chr4	62185795	62185861	protein_coding	Pole3	exon	ENSMUSG00000028394	ProperStrand	18	1	-14.2811
chr4	43505657	43505719	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr2	29927010	29927067	protein_coding	Set	utr3	ENSMUSG00000054766	ProperStrand	167	1	-1.3977
chr8	77742558	77742574	protein_coding	Rasd2	exon	ENSMUSG00000034472	NonProperStrand	237	chr17	35089211	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-2.9077
chr7	93946639	93946655	protein_coding	Vmn2r77	intron	ENSMUSG00000090949	NonProperStrand	1	chr2	26493454	26493498	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-inf
chr4	124736325	124736344	protein_coding	Dnali1	exon	ENSMUSG00000042707	ProperStrand	45	chr14	76247711	76247793	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-4.7221
chr12	112779170	112779270	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	chr5	147646458	147646477	snoRNA	ENSMUSG00000077185_SNORD102	.	ENSMUSG00000077185	ProperStrand	142	1	-3.1656
chr2	178194847	178194864	protein_coding	Cdh26	exon	ENSMUSG00000039155	NonProperStrand	77	chr6	71832550	71832685	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	7	-inf
chr19	9078745	9078825	protein_coding	Ahnak	exon	ENSMUSG00000069833	ProperStrand	103	chr2	166888763	166889191	protein_coding	1500012F01Rik	utr5	ENSMUSG00000074578	ProperStrand	14	3	-inf
chr2	90235316	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	49534111	49534128	protein_coding	Zfp189	utr5	ENSMUSG00000039634	ProperStrand	18	1	-6.8363
chr3	100699222	100699240	protein_coding	Vtcn1	utr3	ENSMUSG00000051076	ProperStrand	4	chr2	26493413	26493484	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-9.2834
chr11	103662029	103662046	protein_coding	Wnt3	intron	ENSMUSG00000000125	NonProperStrand	22	chr12	114153558	114153722	protein_coding	Jag2	exon	ENSMUSG00000002799	ProperStrand	28	1	-16.8477
chr2	158184119	158184209	snoRNA	ENSMUSG00000064995_SNORA71	.	ENSMUSG00000064995	ProperStrand	430	chr2	130103751	130103809	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	2	-7.6251
chr11	97028903	97038604	protein_coding	Kpnb1	exon	ENSMUSG00000001440	ProperStrand	197	chr5	130300460	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	6	-6.8608
chr19	11998381	11998492	protein_coding	Patl1	exon	ENSMUSG00000046139	ProperStrand	49	chr1	162967519	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	4	-12.6533
chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	chr9	64022855	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-3.0174
chr9	67154336	67156679	protein_coding	Tln2	exon	ENSMUSG00000052698	ProperStrand	79	chr2	26768367	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	2	-8.3414
chr17	4082234	4082284	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr4	56910496	56910590	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-2.9459
chr14	27912854	27912872	protein_coding	Il17rd	exon	ENSMUSG00000040717	ProperStrand	24	chr19	5039314	5039361	protein_coding	B3gnt1	exon	ENSMUSG00000047379	ProperStrand	6	1	-18.9230
chr8	112468269	112468285	protein_coding	Phlpp2	utr3	ENSMUSG00000031732	NonProperStrand	2	chr8	96703127	96703144	protein_coding	Mt1	utr5	ENSMUSG00000031765	NonProperStrand	2	1	-inf
chr9	44569030	44569068	protein_coding	Arcn1	intron	ENSMUSG00000032096	ProperStrand	35	chr11	77996559	77996624	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	5	-19.7075
chr12	88472755	88474383	protein_coding	Pomt2	exon	ENSMUSG00000034126	ProperStrand	15	chr7	116663634	116663691	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-5.1056
chr17	33856212	33856230	SINE	MIRb	MIR	chr17MIRb33856102	ProperStrand	2	chr1	88252852	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	2	-inf
chr11	3221517	3221546	lincRNA	Gm12592	intron	ENSMUSG00000053263	NonProperStrand	3	chr2	130101985	130102052	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	3	-inf
chr7	19863580	19863621	protein_coding	Ppm1n	intron	ENSMUSG00000030402	ProperStrand	6	chr3	123210854	123210886	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-6.4760
chr11	97007813	97007830	protein_coding	Tbkbp1	exon	ENSMUSG00000038517	ProperStrand	10	chr18	35716684	35716701	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-5.5279
chr16	13949288	13949378	protein_coding	Mpv17l	utr3	ENSMUSG00000022679	NonProperStrand	2	chr16	35846620	35846710	protein_coding	Parp14	intron	ENSMUSG00000034422	NonProperStrand	2	1	-inf
chr9	98726931	98727021	LINE	Lx8	L1	chr9Lx898726896	ProperStrand	1	chr9	98726789	98726869	SINE	B1_Mur3	Alu	chr9B1_Mur398726755	ProperStrand	1	1	-inf
chr18	34532877	34532977	protein_coding	Reep5	utr5	ENSMUSG00000005873	ProperStrand	19	chr10	23505571	23505617	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-9.8721
chrX	152338637	152338656	protein_coding	Gm15155	intron	ENSMUSG00000055109	ProperStrand	9	chr14	33005095	33005138	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-7.7725
chr2	28368859	28368877	protein_coding	Ralgds	utr5	ENSMUSG00000026821	NonProperStrand	60	chr15	82979481	82979497	protein_coding	Poldip3	intron	ENSMUSG00000041815	NonProperStrand	3	1	-20.1674
chr16	31133624	31133684	protein_coding	Acap2	exon	ENSMUSG00000049076	ProperStrand	17	chr5	130300460	130300550	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.8548
chr1	45448521	45448537	protein_coding	Col5a2	exon	ENSMUSG00000026042	ProperStrand	184	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-5.5282
chr11	78214288	78214305	antisense	Gm11194	.	ENSMUSG00000085747	ProperStrand	35	chr2	119761049	119761170	protein_coding	Mga	exon	ENSMUSG00000033943	ProperStrand	180	1	-12.1981
chr5	116082194	116090118	protein_coding	Rab35	exon	ENSMUSG00000029518	ProperStrand	17	chr16	23111374	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	10	-20.5643
chr15	100462916	100462932	protein_coding	Smagp	intron	ENSMUSG00000053559	NonProperStrand	2	chr9	120038466	120038516	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-inf
chr19	44188368	44188545	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr19	8799831	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	2	-1.1464
chr9	53452730	53454784	protein_coding	Cul5	exon	ENSMUSG00000032030	NonProperStrand	4	chr2	158182201	158182241	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-10.6141
chr14	56159295	56159313	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	chr7	148634700	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	4	-7.3262
chr18	75161131	75161172	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	chr1	88252875	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-2.5950
chr2	32819050	32819090	protein_coding	Rpl12	exon	ENSMUSG00000038900	ProperStrand	167	chr6	83198879	83198896	protein_coding	Slc4a5	intron	ENSMUSG00000068323	NonProperStrand	11	1	-14.7311
chr8	13416897	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr19	42225881	42225897	protein_coding	Marveld1	utr3	ENSMUSG00000044345	NonProperStrand	112	1	-5.2311
chr5	35954692	35955035	protein_coding	Acox3	exon	ENSMUSG00000029098	ProperStrand	12	chr4	131866155	131866257	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	3	-15.7700
chr11	97048919	97048999	protein_coding	Kpnb1	utr5	ENSMUSG00000001440	ProperStrand	197	chr1	187279003	187279093	protein_coding	Slc30a10	exon	ENSMUSG00000026614	ProperStrand	2	1	-19.0333
chr6	52965701	52965718	protein_coding	Jazf1	intron	ENSMUSG00000063568	ProperStrand	43	chr11	62418037	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	2	-10.0914
chr5	125507572	125509066	protein_coding	Ncor2	exon	ENSMUSG00000029478	ProperStrand	377	chr12	55796422	55796439	protein_coding	Eapp	intron	ENSMUSG00000054302	NonProperStrand	62	1	-9.5660
chr15	99610627	99610727	protein_coding	Lima1	utr3	ENSMUSG00000023022	ProperStrand	159	chr19	30161726	30161767	protein_coding	Uhrf2	exon	ENSMUSG00000024817	ProperStrand	40	1	-12.1767
chr4	116224238	116224276	protein_coding	Tmem69	utr3	ENSMUSG00000055900	ProperStrand	3	chr7	118219575	118219636	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-17.3852
chr2	31924012	31924028	protein_coding	Fam78a	utr3	ENSMUSG00000050592	NonProperStrand	340	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-0.8495
chr13	49480544	49480584	protein_coding	Bicd2	utr3	ENSMUSG00000037933	ProperStrand	18	chr1	89673601	89673688	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-5.5701
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	3	-4.6955
chr10	6063958	6063976	protein_coding	Akap12	intron	ENSMUSG00000038587	ProperStrand	1008	chr10	81028098	81028307	protein_coding	Aes	exon	ENSMUSG00000054452	ProperStrand	34	2	-14.0135
chr17	12934311	12934330	antisense	Airn	.	ENSMUSG00000078247	ProperStrand	5	chr1	13165048	13165065	protein_coding	Ncoa2	exon	ENSMUSG00000005886	NonProperStrand	9	1	-18.9379
chr3	151937411	151937443	protein_coding	Fam73a	utr3	ENSMUSG00000054942	ProperStrand	34	chr16	23110912	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.8923
chr8	113642020	113645098	protein_coding	Pdpr	exon	ENSMUSG00000033624	ProperStrand	49	chr7	116664814	116664894	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.9031
chr5	34787478	34787537	protein_coding	Fam193a	exon	ENSMUSG00000037210	ProperStrand	41	chr7	28111576	28111593	protein_coding	Ltbp4	exon	ENSMUSG00000040488	ProperStrand	91	1	-13.2478
chr2	147009105	147009122	protein_coding	Nkx2-2	utr3	ENSMUSG00000027434	NonProperStrand	84	chr11	57873764	57873780	protein_coding	Larp1	utr3	ENSMUSG00000037331	ProperStrand	201	1	-10.2124
chr11	88791570	88791618	protein_coding	Scpep1	exon	ENSMUSG00000000278	ProperStrand	54	chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	1	-10.0854
chr15	85411906	85411924	protein_coding	Wnt7b	utr5	ENSMUSG00000022382	ProperStrand	21	chr14	31826494	31826510	protein_coding	Gnl3	exon	ENSMUSG00000042354	NonProperStrand	59	1	-15.4599
chr5	134762905	134765212	protein_coding	Gtf2i	exon	ENSMUSG00000060261	ProperStrand	41	chr13	62644617	62644696	snoRNA	ENSMUSG00000075946_SNORA25	.	ENSMUSG00000075946	ProperStrand	11	1	-17.5653
chr6	87795510	87795698	protein_coding	Cnbp	exon	ENSMUSG00000030057	ProperStrand	46	chr10	23505182	23505262	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.6154
chr13	112790641	112790660	LTR	MLT1B	MaLR	chr13MLT1B112790458	NonProperStrand	1	chr17	36025072	36025125	protein_coding	Dhx16	exon	ENSMUSG00000024422	ProperStrand	28	1	-inf
chr7	28108261	28109137	protein_coding	Ltbp4	exon	ENSMUSG00000040488	ProperStrand	91	chr19	8963036	8963126	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.6128
chr15	103176437	103177016	protein_coding	Itga5	exon	ENSMUSG00000000555	ProperStrand	28	chr3	68889026	68889046	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	2	-7.8102
chr6	61714065	61714155	protein_coding	Fam190a	intron	ENSMUSG00000039578	NonProperStrand	24	chr6	61715392	61715472	protein_coding	Fam190a	intron	ENSMUSG00000039578	ProperStrand	28	1	-16.6724
chr2	35583638	35583695	protein_coding	Dab2ip	exon	ENSMUSG00000026883	ProperStrand	93	chr17	35089182	35089234	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	4	-14.5881
chr15	85970516	85970532	protein_coding	Cerk	utr3	ENSMUSG00000035891	ProperStrand	3	chr16	23111372	23111435	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-6.9982
chr15	68085063	68085111	protein_coding	Zfat	intron	ENSMUSG00000022335	ProperStrand	6	chr10	23505149	23505213	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-9.1162
mmu-miR-690	0	16	miRNA	mmu-miR-690	.	mmu-miR-690	ProperStrand	63	chr4	131865855	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.6928
chr7	75359906	75363359	protein_coding	Igf1r	exon	ENSMUSG00000005533	ProperStrand	121	chr9	15119647	15119671	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.5005
chr12	83498333	83498392	protein_coding	Sipa1l1	exon	ENSMUSG00000042700	ProperStrand	84	chr4	131908750	131908797	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-4.0114
chr2	27028300	27028318	protein_coding	Dbh	exon	ENSMUSG00000000889	NonProperStrand	4	chr7	29136581	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-18.6525
chr19	29040566	29040618	protein_coding	Ppapdc2	utr3	ENSMUSG00000040105	ProperStrand	14	chr7	118219574	118219592	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-11.4223
chr4	56893379	56893479	protein_coding	D730040F13Rik	intron	ENSMUSG00000055296	ProperStrand	48	chr14	31827479	31827525	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-7.3893
chr11	69266814	69266830	protein_coding	Dnahc2	exon	ENSMUSG00000005237	ProperStrand	95	chr4	147475493	147475509	protein_coding	2610109H07Rik	utr3	ENSMUSG00000029005	NonProperStrand	46	1	-12.9272
chr15	79913288	79913313	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr10	79517744	79517813	protein_coding	Gpx4	exon	ENSMUSG00000075706	ProperStrand	55	2	-6.3520
chr9	95383537	95383572	protein_coding	2610101N10Rik	intron	ENSMUSG00000032407	ProperStrand	56	chr8	98270001	98270091	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-5.6766
chr1	59539683	59539700	protein_coding	Fzd7	utr5	ENSMUSG00000041075	ProperStrand	373	chr1	88247814	88247862	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-1.8167
chr1	94753892	94754079	protein_coding	Gpc1	exon	ENSMUSG00000034220	ProperStrand	30	chr10	23505152	23505196	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-6.2486
chr8	88242825	88246628	protein_coding	Itfg1	exon	ENSMUSG00000031703	ProperStrand	38	chr16	23110562	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.2698
chr4	122968680	122968731	protein_coding	Pabpc4	intron	ENSMUSG00000011257	ProperStrand	85	chr9	15119632	15119677	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-5.6092
chr9	14812090	14812180	protein_coding	Panx1	exon	ENSMUSG00000031934	ProperStrand	5	chr10	39978273	39978353	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-10.5770
chr12	119301895	119301912	protein_coding	Dnahc11	intron	ENSMUSG00000018581	ProperStrand	65	chr19	8800084	8800113	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-7.4484
chr11	62416635	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	chr9	64023228	64023278	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	3	-3.2122
chr4	131908198	131908298	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr4	131908577	131908631	protein_coding	Rcc1	utr5	ENSMUSG00000028896	ProperStrand	55	2	-11.9207
chr11	102294588	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr15	79908929	79908955	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-1.5345
chr12	60171222	60171403	protein_coding	Pnn	exon	ENSMUSG00000020994	ProperStrand	42	chr17	24665444	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-5.6364
chr4	43505903	43505931	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr19	23332023	23332040	protein_coding	Smc5	exon	ENSMUSG00000024943	ProperStrand	146	1	-1.5935
chrX	104988982	105003135	protein_coding	2610002M06Rik	exon	ENSMUSG00000031242	ProperStrand	3	chr9	15119712	15119760	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-8.7352
chr8	73419657	73419747	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	chr15	57978172	57978252	snoRNA	ENSMUSG00000080461_SNORA11	.	ENSMUSG00000080461	ProperStrand	171	6	-9.8412
chr9	92437258	92437290	protein_coding	Plod2	utr5	ENSMUSG00000032374	ProperStrand	52	chr14	76247741	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-4.4443
chr14	57341984	57342001	protein_coding	Pspc1	exon	ENSMUSG00000021938	ProperStrand	11	chr17	39985579	39985620	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-9.3627
chr8	67881439	67881456	LTR	MTEa-int	MaLR	chr8MTEa-int67880462	ProperStrand	39	chr10	23505221	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.8710
chr5	137511011	137511107	protein_coding	Ap1s1	utr3	ENSMUSG00000004849	ProperStrand	16	chr18	35716855	35716878	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.5854
chr11	102260719	102260945	protein_coding	Rundc3a	exon	ENSMUSG00000006575	ProperStrand	13	chr1	162968228	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	8	-22.9484
chr5	143665411	143665501	protein_coding	Actb	utr3	ENSMUSG00000029580	ProperStrand	446	chr7	83017687	83017705	protein_coding	Klhl25	utr3	ENSMUSG00000055652	ProperStrand	4	1	-14.9774
chr5	135630188	135630292	protein_coding	Tbl2	exon	ENSMUSG00000005374	ProperStrand	28	chr1	155316786	155316827	protein_coding	Dhx9	exon	ENSMUSG00000042699	ProperStrand	98	1	-13.8697
chr14	61398407	61398423	protein_coding	C1qtnf9	exon	ENSMUSG00000071347	ProperStrand	187	chr5	121655105	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-1.7825
chr6	120841068	120841110	protein_coding	Bcl2l13	utr3	ENSMUSG00000009112	ProperStrand	18	chr19	8798754	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-7.1868
chr19	32874557	32899519	protein_coding	Pten	utr3	ENSMUSG00000013663	ProperStrand	20	chr10	23505149	23505236	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-13.7931
chr11	33059991	33060411	protein_coding	Npm1	exon	ENSMUSG00000057113	ProperStrand	352	chr2	166890780	166890828	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	4	-19.3385
chr9	61220332	61220349	protein_coding	Tle3	utr5	ENSMUSG00000032280	ProperStrand	88	chr4	131908689	131908751	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.7510
chr19	5493899	5493934	protein_coding	Cfl1	utr3	ENSMUSG00000056201	ProperStrand	88	chr5	130295426	130295502	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	2	-7.4956
chr7	118318359	118318377	SINE	MIRb	MIR	chr7MIRb118318200	NonProperStrand	1	chr16	23110938	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr1	93880957	93881047	protein_coding	Hdac4	exon	ENSMUSG00000026313	ProperStrand	27	chr16	23110829	23110909	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.1875
chr17	23955820	23955839	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	chr11	120294405	120294422	protein_coding	Nploc4	exon	ENSMUSG00000039703	ProperStrand	44	1	-12.1006
chr5	23471113	23471129	protein_coding	Fam126a	exon	ENSMUSG00000028995	NonProperStrand	2	chr7	116664817	116664907	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-9.7350
chr2	9985901	9985917	protein_coding	Atp5c1	exon	ENSMUSG00000025781	ProperStrand	138	chr5	130300419	130300509	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-2.3421
chr3	107427316	107427392	protein_coding	Fam40a	exon	ENSMUSG00000014601	ProperStrand	18	chr8	40681587	40681603	protein_coding	Msr1	intron	ENSMUSG00000025044	ProperStrand	138	1	-14.0876
chr19	7352794	7352894	protein_coding	Mark2	intron	ENSMUSG00000024969	ProperStrand	75	chr4	131908689	131908805	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-6.0412
chr7	134671388	134671463	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	chr16	43886794	43886850	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	9	-19.6182
chr1	58504530	58504556	protein_coding	Nif3l1	exon	ENSMUSG00000026036	ProperStrand	5	chr11	69481333	69481413	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-8.1843
chr8	77547202	77547911	protein_coding	Hmgxb4	exon	ENSMUSG00000034518	NonProperStrand	4	chr1	145626057	145626176	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	3	-inf
chrX	156001410	156001473	protein_coding	A830080D01Rik	intron	ENSMUSG00000044150	ProperStrand	102	chr11	97642952	97643000	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-3.0003
chr17	35971992	35972019	protein_coding	Tubb5	exon	ENSMUSG00000001525	ProperStrand	624	chr10	61325507	61325796	protein_coding	Col13a1	exon	ENSMUSG00000058806	ProperStrand	120	1	-7.2458
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chrX	103389812	103389981	protein_coding	Pgk1	exon	ENSMUSG00000062070	ProperStrand	484	1	-4.5060
chr9	40612258	40612351	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr5	8429685	8429704	protein_coding	Slc25a40	intron	ENSMUSG00000054099	NonProperStrand	12	1	-11.4149
chr11	96879389	96879406	protein_coding	Sp6	intron	ENSMUSG00000038560	ProperStrand	2	chr5	140895537	140895610	protein_coding	Eif3b	exon	ENSMUSG00000056076	ProperStrand	66	1	-inf
chr18	74094667	74094767	protein_coding	Mapk4	exon	ENSMUSG00000024558	ProperStrand	34	chr11	62418062	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	8	-19.5018
chr4	134470813	134470867	protein_coding	Tmem50a	utr5	ENSMUSG00000028822	ProperStrand	8	chr9	21548752	21548768	protein_coding	Ldlr	exon	ENSMUSG00000032193	NonProperStrand	39	1	-17.6405
chr8	18632634	18641637	protein_coding	Mcph1	exon	ENSMUSG00000039842	ProperStrand	34	chr5	130300460	130300553	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	5	-15.1337
chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	chr4	129662259	129662275	protein_coding	Bai2	utr5	ENSMUSG00000028782	ProperStrand	119	1	-7.1396
chrX	34453509	34453571	protein_coding	Sept6	utr3	ENSMUSG00000050379	ProperStrand	29	chr12	17552962	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	2	-10.5747
chr17	23940773	23940789	protein_coding	Srrm2	intron	ENSMUSG00000039218	NonProperStrand	150	chr13	21872294	21872346	protein_coding	Hist1h1b	exon	ENSMUSG00000058773	ProperStrand	65	1	-11.3135
chr14	119693352	119693368	protein_coding	Hs6st3	intron	ENSMUSG00000053465	NonProperStrand	134	chr9	15119631	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-2.5690
chr7	129237166	129237197	protein_coding	Ndufab1	exon	ENSMUSG00000030869	ProperStrand	11	chr16	23110557	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.6740
chr17	34750169	34750193	protein_coding	Agpat1	utr3	ENSMUSG00000034254	ProperStrand	28	chr15	98350186	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-6.2557
chr5	111088175	111088226	protein_coding	Ddx51	utr3	ENSMUSG00000029504	ProperStrand	54	chr1	162967514	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-3.6691
chr16	22929163	22929246	protein_coding	Fetub	exon	ENSMUSG00000022871	ProperStrand	1	chr16	23111382	23111472	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-inf
chr15	51630904	51674102	protein_coding	Eif3h	exon	ENSMUSG00000022312	ProperStrand	45	chr2	158185594	158185655	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-7.0576
chr12	110888817	110888947	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr5	108334221	108334328	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	2	-1.8473
mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr3	96528274	96528364	protein_coding	Polr3c	intron	ENSMUSG00000028099	ProperStrand	16	1	-8.5577
chr8	38049667	38049683	LTR	MLT1A0	MaLR	chr8MLT1A038049422	NonProperStrand	91	chr17	35089181	35089226	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-4.6787
chr12	34736908	34736925	protein_coding	Hdac9	utr3	ENSMUSG00000004698	NonProperStrand	25	chr9	78327829	78327910	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	2	-12.9377
chr4	5726558	5726577	protein_coding	Fam110b	exon	ENSMUSG00000049119	ProperStrand	25	chr4	131908236	131908346	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-7.4427
chr8	87436301	87436337	protein_coding	Mast1	exon	ENSMUSG00000053693	ProperStrand	16	chr14	33005136	33005238	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-6.5846
chr13	64469448	64469538	protein_coding	Ctsl	exon	ENSMUSG00000021477	ProperStrand	44	chr1	183050607	183054044	protein_coding	Nvl	exon	ENSMUSG00000026516	ProperStrand	89	1	-13.1500
chr13	55802844	55802889	protein_coding	B230219D22Rik	utr3	ENSMUSG00000045767	ProperStrand	19	chr7	117166761	117166851	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	5	-20.5006
chr1	157175756	157175791	protein_coding	Xpr1	exon	ENSMUSG00000026469	ProperStrand	15	chr2	83693562	83693578	protein_coding	Fam171b	exon	ENSMUSG00000048388	NonProperStrand	175	1	-13.9855
chr16	11219671	11254084	protein_coding	Gspt1	utr3	ENSMUSG00000062203	ProperStrand	49	chr7	29136526	29136637	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	6	-15.3697
chr13	58495085	58495470	protein_coding	Hnrnpk	exon	ENSMUSG00000021546	ProperStrand	117	chr4	131865485	131865511	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-2.7856
chr7	29171541	29171558	protein_coding	Med29	utr3	ENSMUSG00000003444	NonProperStrand	134	chr15	76262617	76262700	protein_coding	Heatr7a	exon	ENSMUSG00000022558	ProperStrand	48	1	-12.1502
chr17	23818280	23818370	protein_coding	Cldn6	exon	ENSMUSG00000023906	ProperStrand	74	chr9	15119631	15119711	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.2728
chr14	87659491	87659512	LTR	MTEa	MaLR	chr14MTEa87659331	NonProperStrand	83	chr15	9110035	9110092	protein_coding	Lmbrd2	intron	ENSMUSG00000039704	ProperStrand	8	1	-16.6770
chr2	79132657	79132674	protein_coding-noncoding	Itga4	utr5	ENSMUSG00000027009	NonProperStrand	118	chr8	73419662	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	4	-7.5326
chr8	86094789	86094872	protein_coding	Ndufb7	exon	ENSMUSG00000033938	ProperStrand	7	chr7	117189957	117190047	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-12.3930
chr2	31924012	31924028	protein_coding	Fam78a	utr3	ENSMUSG00000050592	NonProperStrand	340	chr5	108336363	108336406	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-1.7862
mmu-miR-6238	1	22	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr7	27220261	27220906	protein_coding	Nlrp4a	utr5	ENSMUSG00000040601	ProperStrand	2	1	-18.2407
chr7	25764346	25764405	protein_coding	Atp1a3	exon	ENSMUSG00000040907	ProperStrand	66	chr4	122264167	122264184	pseudogene	Gm12877	.	ENSMUSG00000081377	NonProperStrand	16	1	-15.8013
chr13	29098491	29098508	SINE	MIRc	MIR	chr13MIRc29098494	ProperStrand	2	chr11	6428076	6428169	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-inf
chr12	103221445	103221462	protein_coding	Cpsf2	exon	ENSMUSG00000041781	NonProperStrand	1	chr5	108336363	108336422	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-inf
chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	chr8	73419329	73419822	protein_coding	Rpl18a	exon	ENSMUSG00000045128	ProperStrand	394	2	-7.3513
chr18	36925195	36925620	protein_coding	Dnd1	exon	ENSMUSG00000044595	ProperStrand	14	chr7	116664819	116664899	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-5.2856
chr7	106627433	106627793	protein_coding	Rps3	utr3	ENSMUSG00000030744	ProperStrand	159	chr4	131908356	131908440	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-0.7876
chr5	137967425	137967500	protein_coding	Gigyf1	utr3	ENSMUSG00000029714	ProperStrand	49	chr10	23505152	23505204	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.5211
chr2	72123795	72243224	protein_coding	B230120H23Rik	utr3	ENSMUSG00000004085	ProperStrand	34	chr16	23110961	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.8174
chr4	42993452	42993506	protein_coding	Vcp	exon	ENSMUSG00000028452	ProperStrand	108	chr18	86652679	86652696	protein_coding	Neto1	intron	ENSMUSG00000050321	NonProperStrand	8	1	-16.2304
chr2	163485034	163485051	protein_coding	Pkig	intron	ENSMUSG00000035268	ProperStrand	13	chr18	73693113	73693147	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-8.5978
chr10	76371872	76371888	protein_coding	Pcbp3	intron	ENSMUSG00000001120	ProperStrand	12	chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-9.7127
chr2	18076749	18076766	protein_coding	Mllt10	intron	ENSMUSG00000026743	NonProperStrand	4	chr16	23110842	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.6489
chr15	54676049	54676066	protein_coding	Enpp2	exon	ENSMUSG00000022425	ProperStrand	31	chr6	125118222	125118328	protein_coding	Ncapd2	utr3	ENSMUSG00000038252	ProperStrand	170	1	-12.5584
chrX	132673816	132673833	protein_coding	Bex4	intron	ENSMUSG00000047844	NonProperStrand	70	chr1	89673606	89673710	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	5	-13.2287
chr9	57606519	57608636	protein_coding	Clk3	exon	ENSMUSG00000032316	NonProperStrand	15	chr4	116826707	116826766	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-9.5820
chr1	117080586	117080666	LINE	L1_Mus2	L1	chr1L1_Mus2117079955	ProperStrand	1	chr7	54443072	54443162	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-inf
chr8	125837214	125840263	protein_coding	Fanca	exon	ENSMUSG00000032815	ProperStrand	32	chr7	150717335	150717425	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	6	-20.3753
chr8	59991434	59991450	protein_coding	Hmgb2	exon	ENSMUSG00000054717	NonProperStrand	96	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-6.8052
chr16	61934046	61934126	LINE	L1Md_F2	L1	chr16L1Md_F261932290	ProperStrand	1	chr16	61934195	61934285	LINE	L1Md_F2	L1	chr16L1Md_F261934053	ProperStrand	1	1	-inf
chr4	108690443	108691580	protein_coding	Nrd1	exon	ENSMUSG00000053510	ProperStrand	76	chr1	88252836	88252889	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	4	-18.3728
chr4	116875189	116875249	snRNA	ENSMUSG00000070228_U5	.	ENSMUSG00000070228	ProperStrand	131	chr11	97642970	97643070	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.2577
chr10	47957963	47958043	LINE	L1Md_T	L1	chr10L1Md_T47956954	NonProperStrand	1	chr1	85210187	85210277	protein_coding	C130026I21Rik	intron	ENSMUSG00000052477	ProperStrand	6	1	-inf
chr2	71085921	71085937	protein_coding	Dync1i2	exon	ENSMUSG00000027012	NonProperStrand	58	chrX	84483703	84483726	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-8.3169
chr14	103554063	103687865	protein_coding	Mycbp2	exon	ENSMUSG00000033004	ProperStrand	129	chr16	23111451	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-1.6496
chr10	60895531	60895603	protein_coding	Eif4ebp2	utr3	ENSMUSG00000020091	ProperStrand	39	chr5	74489597	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-4.5953
chr8	73120649	73120696	protein_coding	Isyna1	exon	ENSMUSG00000019139	ProperStrand	15	chr17	66728875	66728975	protein_coding	1110012J17Rik	exon	ENSMUSG00000052105	ProperStrand	60	1	-16.1548
chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	chr7	52381745	52381805	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-4.2252
chr7	104727817	104727886	protein_coding	1810020D17Rik	utr5	ENSMUSG00000035642	ProperStrand	2	chr18	35716701	35716791	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-9.2832
chr4	74843493	74843509	LINE	Lx9	L1	chr4Lx974843264	NonProperStrand	30	chr4	132850153	132850182	protein_coding	Wdtc1	exon	ENSMUSG00000037622	ProperStrand	81	1	-14.1163
chr7	26058566	26058582	protein_coding	Cic	exon	ENSMUSG00000005442	NonProperStrand	6	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-13.3499
chr2	84511480	84511496	protein_coding	Tmx2	utr3	ENSMUSG00000050043	ProperStrand	31	chr4	131908718	131908808	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.2342
chr7	145734475	145734565	Simple_repeat	(TGGA)n	Simple_repeat	chr7(TGGA)n145734472	NonProperStrand	1	chr7	145734702	145734782	Simple_repeat	(TGGA)n	Simple_repeat	chr7(TGGA)n145734714	NonProperStrand	1	1	-inf
chr5	31782731	31782748	protein_coding	Zfp512	utr3	ENSMUSG00000062761	ProperStrand	44	chr5	74489620	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-4.3638
chr15	51796562	51798137	protein_coding	Rad21	exon	ENSMUSG00000022314	ProperStrand	85	chr4	131908805	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-2.6906
chr9	49371489	49371579	protein_coding	Ncam1	intron	ENSMUSG00000039542	NonProperStrand	8	chr9	49370580	49370660	protein_coding	Gm11149	utr3	ENSMUSG00000079564	ProperStrand	1	1	-inf
chr13	76322579	76322595	protein_coding	Ttc37	exon	ENSMUSG00000033991	NonProperStrand	2	chr14	29195979	29196000	protein_coding	Erc2	intron	ENSMUSG00000040640	NonProperStrand	10	1	-inf
chr9	46043634	46043652	protein_coding	Apoc3	utr5	ENSMUSG00000032081	NonProperStrand	1	chr1	24621377	24621394	protein_coding	Gm10925	exon	ENSMUSG00000090378	NonProperStrand	70	1	-inf
chr8	109428144	109428244	protein_coding	Cirh1a	exon	ENSMUSG00000041438	ProperStrand	40	chrX	34622906	34622981	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-3.9200
chr18	38409775	38409791	lincRNA	1700086O06Rik	exon	ENSMUSG00000086988	NonProperStrand	28	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.0580
chr11	108228044	108228135	protein_coding	Apoh	intron	ENSMUSG00000000049	ProperStrand	2	chr9	79933860	79933940	protein_coding	Senp6	intron	ENSMUSG00000034252	ProperStrand	110	1	-inf
chr15	37951418	37952200	protein_coding	Ubr5	exon	ENSMUSG00000037487	ProperStrand	258	chr11	63885336	63887052	protein_coding	Cox10	exon	ENSMUSG00000042148	NonProperStrand	187	1	-8.1154
chr12	70260526	70260584	misc_RNA	AC099934.1	.	ENSMUSG00000092665	ProperStrand	45	chr4	131908362	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-3.3962
chr3	90017539	90017569	protein_coding	Rps27	utr5	ENSMUSG00000090733	ProperStrand	40	chr16	23111391	23111491	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-3.4115
chr10	128135986	128136021	protein_coding	Cdk2	utr3	ENSMUSG00000025358	ProperStrand	19	chr3	69357823	69357839	protein_coding	Ppm1l	utr3	ENSMUSG00000027784	NonProperStrand	29	1	-17.2367
chr17	46812044	46812061	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr2	25920077	25920093	protein_coding	Nacc2	exon	ENSMUSG00000026932	NonProperStrand	15	1	-12.0485
chr14	52626664	52626687	protein_coding	Zfp219	exon	ENSMUSG00000049295	ProperStrand	27	chr10	23505152	23505205	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.4811
chr5	104428401	104428436	protein_coding	Hsd17b11	intron	ENSMUSG00000029311	ProperStrand	3	chr10	23505152	23505183	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-6.9610
chrX	45788962	45788979	protein_coding	Elf4	intron	ENSMUSG00000031103	NonProperStrand	49	chr19	8963056	8963083	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.6199
chr1	102076759	102076791	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	chr1	162967137	162967178	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	1	-4.8658
chr3	152450608	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	chr7	54110569	54110668	protein_coding	Ldha	utr3	ENSMUSG00000063229	ProperStrand	280	1	-5.7530
chr15	103180672	103180689	protein_coding	Itga5	exon	ENSMUSG00000000555	NonProperStrand	8	chr7	20281651	20281735	protein_coding	Apoe	utr3	ENSMUSG00000002985	ProperStrand	231	1	-14.7499
chr7	3155740	3155797	protein_coding	AU018091	utr3	ENSMUSG00000054753	ProperStrand	42	chr11	62418033	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-6.2597
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr7	105310561	105310577	protein_coding	Capn5	exon	ENSMUSG00000035547	ProperStrand	99	1	-6.7996
chr2	153500688	153500723	protein_coding	Dnmt3b	exon	ENSMUSG00000027478	ProperStrand	19	chr15	79913314	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-5.8137
chr5	77711030	77711086	protein_coding	Rest	exon	ENSMUSG00000029249	ProperStrand	136	chr19	8798740	8798812	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-3.2670
chr16	11753769	11753786	protein_coding	Snx29	intron	ENSMUSG00000071669	NonProperStrand	38	chr16	23110961	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.7634
chr7	31928840	31935920	protein_coding	Gramd1a	exon	ENSMUSG00000001248	ProperStrand	24	chr6	146708677	146708693	protein_coding	Stk38l	exon	ENSMUSG00000001630	ProperStrand	60	1	-15.1651
chr11	14961829	14961849	LINE	Lx	L1	chr11Lx14961726	ProperStrand	93	chr16	23110515	23110572	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.7484
chr14	76906790	76906850	protein_coding	Tsc22d1	utr3	ENSMUSG00000022010	ProperStrand	86	chr18	75161533	75161562	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	2	-10.4904
chr17	45710141	45710205	protein_coding	Hsp90ab1	utr5	ENSMUSG00000023944	ProperStrand	1627	chr9	39358287	39358304	protein_coding	Olfr958	exon	ENSMUSG00000050853	NonProperStrand	266	1	-3.8519
chr5	143665261	143665302	protein_coding	Actb	utr3	ENSMUSG00000029580	ProperStrand	446	chr3	85944541	85944606	snoRNA	ENSMUSG00000064390_Rnu73b	.	ENSMUSG00000064390	ProperStrand	164	1	-7.2906
chr9	72596774	72596872	protein_coding	Nedd4	utr3	ENSMUSG00000032216	ProperStrand	308	chr10	23506278	23506301	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-3.7845
chr17	34987610	34987862	protein_coding	Rdbp	utr5	ENSMUSG00000024369	ProperStrand	7	chr2	130102070	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-9.7314
chrX	103392228	103393223	protein_coding	Pgk1	exon	ENSMUSG00000062070	ProperStrand	484	chr17	24856620	24856690	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-2.5060
chr18	71801414	71801434	protein_coding	Dcc	intron	ENSMUSG00000060534	ProperStrand	12	chr9	15118257	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-6.6107
chr19	8799021	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	chr11	77996558	77996619	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	5	-2.5137
chr4	106754718	106754765	protein_coding	Cyb5rl	intron	ENSMUSG00000028621	ProperStrand	2	chr3	123210854	123210937	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-9.1566
chr16	23110787	23111244	protein_coding	Eif4a2	exon	ENSMUSG00000022884	ProperStrand	356	chr10	110918638	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-0.7111
chr8	127317792	127317808	protein_coding	Trim67	utr5	ENSMUSG00000036913	ProperStrand	43	chr9	15118244	15118283	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-4.0886
chr2	70560115	70562108	protein_coding	Tlk1	exon	ENSMUSG00000041997	ProperStrand	18	chr16	23110989	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7867
chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	chr2	167309992	167310009	protein_coding	Spata2	exon	ENSMUSG00000047030	NonProperStrand	6	1	-14.2028
chr8	74212518	74212571	protein_coding	Jak3	intron	ENSMUSG00000031805	ProperStrand	24	chr16	23110939	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-5.9609
chr7	52141253	52141563	protein_coding	Med25	exon	ENSMUSG00000002968	ProperStrand	33	chr11	69483173	69483263	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.5168
chr18	10052132	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr12	111889710	111889727	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	2	-6.9205
chr1	82679326	82679342	protein_coding	Col4a3	exon	ENSMUSG00000079465	ProperStrand	99	chr15	79908958	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-4.5053
chr4	137099782	137099834	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	chr19	7496997	7497072	protein_coding	2700081O15Rik	intron	ENSMUSG00000053080	ProperStrand	9	2	-18.6980
chr7	16922103	16922131	protein_coding	Sae1	exon	ENSMUSG00000052833	ProperStrand	29	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-10.4461
chr4	118806095	118809755	protein_coding	Slc2a1	exon	ENSMUSG00000028645	ProperStrand	361	chr2	26494761	26494842	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-1.1127
chr17	24858022	24858192	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr19	8798740	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	7	-12.8113
chr11	45723144	45723160	protein_coding	Clint1	utr3	ENSMUSG00000006169	NonProperStrand	273	chr5	151755616	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-4.7667
chr8	44686609	44686625	LINE	L1Md_F3	L1	chr8L1Md_F344682792	NonProperStrand	1	chr11	83107805	83107844	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	1	-inf
chr2	165633104	165633130	protein_coding	Zmynd8	exon	ENSMUSG00000039671	ProperStrand	81	chr4	116826700	116826755	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	2	-10.0374
chr11	53080480	53113647	protein_coding	Hspa4	exon	ENSMUSG00000020361	ProperStrand	69	chr7	51503468	51505908	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	2	-13.2720
chr7	110270487	110270503	protein_coding	Olfr586	exon	ENSMUSG00000066268	NonProperStrand	6	chr16	23110896	23110951	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.7876
chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	chr2	130103751	130103811	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-4.7171
chr19	40254949	40254965	protein_coding	Cyp2c70	exon	ENSMUSG00000060613	ProperStrand	5	chr2	119876752	119876802	protein_coding	Spnb5	intron	ENSMUSG00000074899	ProperStrand	5	1	-19.0779
chr3	51127178	51127237	protein_coding	Elf2	utr5	ENSMUSG00000037174	ProperStrand	21	chr4	116827119	116827158	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-9.1534
chr2	151822354	151822370	protein_coding	Slc52a3	utr5	ENSMUSG00000027463	NonProperStrand	2	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-13.2951
chr11	82692475	82692491	protein_coding	Rad51l3	exon	ENSMUSG00000018841	ProperStrand	112	chr7	67123708	67123759	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	1	-8.2896
chr1	162968213	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	chr3	123210870	123210985	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	21	-2.4325
chr10	82344677	82346732	protein_coding	Txnrd1	exon	ENSMUSG00000020250	ProperStrand	47	chr3	87894066	87894125	protein_coding	Iqgap3	exon	ENSMUSG00000028068	ProperStrand	16	1	-16.5268
chr16	20358086	20358109	protein_coding	Abcc5	intron	ENSMUSG00000022822	ProperStrand	30	chr4	41150094	41150143	snoRNA	ENSMUSG00000089265_SNORD121A	.	ENSMUSG00000089265	ProperStrand	370	3	-19.6574
chr13	29717534	29783498	protein_coding	Cdkal1	exon	ENSMUSG00000006191	ProperStrand	43	chr19	8800385	8800465	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-4.1536
chr13	51654819	51654836	protein_coding	Shc3	intron	ENSMUSG00000021448	ProperStrand	50	chr4	58368841	58368860	protein_coding	Musk	intron	ENSMUSG00000057280	ProperStrand	9	1	-17.5746
chr5	143665042	143665115	protein_coding	Actb	utr3	ENSMUSG00000029580	ProperStrand	446	chr2	158182155	158182200	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	2	-2.7602
chr1	162968212	162968259	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	chr4	116827121	116827176	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	3	-3.6328
chr7	66053268	66058847	protein_coding	Atp10a	exon	ENSMUSG00000025324	ProperStrand	37	chr11	6428088	6428156	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.0895
chr6	51413432	51414108	protein_coding	Hnrnpa2b1	exon	ENSMUSG00000004980	ProperStrand	166	chr4	144754462	144754540	protein_coding	Vps13d	exon	ENSMUSG00000020220	ProperStrand	59	20	-19.8602
chr4	43505651	43505825	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	4	-1.6020
chr2	129998665	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr7	150717298	150717357	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	2	-2.0056
chr7	52401087	52401146	protein_coding	Aldh16a1	exon	ENSMUSG00000007833	ProperStrand	27	chr16	23111388	23111478	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.5132
chr4	43505656	43505684	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr12	88791656	88791845	protein_coding	Snw1	exon	ENSMUSG00000021039	ProperStrand	36	3	-9.8245
chr17	66468409	66468427	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	chr8	73419657	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-1.2529
chr15	58289031	58289079	protein_coding	D15Ertd621e	utr3	ENSMUSG00000037119	ProperStrand	26	chr12	112779212	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-6.4195
chr2	130103448	130103502	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	chr2	26768052	26768119	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	1	-3.3080
chr2	26493437	26493517	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr7	4745748	4746073	protein_coding	Rpl28	exon	ENSMUSG00000030432	ProperStrand	220	2	-6.2491
chr7	88286953	88286976	protein_coding	Slc28a1	intron	ENSMUSG00000025726	ProperStrand	8	chr9	102041540	102041562	protein_coding	Ephb1	intron	ENSMUSG00000032537	ProperStrand	13	1	-19.2024
chrX	107396011	107396027	LTR	RMER17A	ERVK	chrXRMER17A107395334	NonProperStrand	27	chrX	54644643	54644698	snoRNA	ENSMUSG00000065110_Snord61	.	ENSMUSG00000065110	ProperStrand	40	1	-15.7757
chr17	24856708	24856768	antisense	Snhg9	.	ENSMUSG00000090101	ProperStrand	218	chr11	97642983	97643073	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-2.2953
chrX	35899956	35899973	protein_coding	Cul4b	exon	ENSMUSG00000031095	NonProperStrand	89	chr7	116663658	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-3.3969
chr19	8963081	8963199	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	chr5	135529873	135529914	snoRNA	ENSMUSG00000088008_SCARNA20	.	ENSMUSG00000088008	ProperStrand	139	1	-1.0257
chr6	34260967	34261990	protein_coding	Akr1b3	exon	ENSMUSG00000001642	ProperStrand	71	chr10	23505152	23505204	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.0125
chr1	108644401	108649804	protein_coding	Kdsr	exon	ENSMUSG00000009905	ProperStrand	17	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-3.4874
chr13	55800860	55800925	protein_coding	B230219D22Rik	exon	ENSMUSG00000045767	ProperStrand	19	chr2	26768408	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-7.8982
chr16	57178009	57178059	protein_coding	Tbc1d23	intron	ENSMUSG00000022749	ProperStrand	6	chr7	116663715	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-7.0045
chr15	99578612	99578667	protein_coding	Lass5	intron	ENSMUSG00000023021	ProperStrand	27	chr16	23110986	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.3280
chr2	130103752	130103795	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	chr11	77996560	77996591	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-1.6925
chr10	44191458	44191488	protein_coding	Prdm1	intron	ENSMUSG00000038151	ProperStrand	9	chr17	24857779	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-5.8950
chr12	105930637	105932727	protein_coding	Dicer1	exon	ENSMUSG00000041415	ProperStrand	61	chr16	23110480	23110570	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.4335
chr14	13427774	13427791	protein_coding	Cadps	intron	ENSMUSG00000054423	NonProperStrand	28	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.7132
chr4	115677338	115677417	protein_coding-noncoding	Faah	utr3	ENSMUSG00000034171	ProperStrand	5	chr5	124573599	124573617	protein_coding	Pitpnm2	exon	ENSMUSG00000029406	NonProperStrand	15	1	-20.1544
chr3	52388277	52388294	SINE	B4A	B4	chr3B4A52388218	ProperStrand	169	chr12	88778746	88778768	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-4.4834
chr6	122262325	122262369	protein_coding	M6pr	exon	ENSMUSG00000007458	ProperStrand	56	chr13	51743672	51743703	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	2	-11.2649
chrX	83547356	83547372	protein_coding	Mageb4	intron	ENSMUSG00000035427	NonProperStrand	191	chr11	62416575	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-5.1713
chr18	10052132	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr2	24915691	24915707	protein_coding	Nelf	exon	ENSMUSG00000006476	ProperStrand	40	1	-9.6165
chr15	16897197	16897303	LINE	Lx3C	L1	chr15Lx3C16897056	ProperStrand	1	chr4	131908689	131908739	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-inf
chr2	70514534	70514572	protein_coding	Gorasp2	exon	ENSMUSG00000014959	ProperStrand	21	chr11	120835195	120835237	protein_coding	Csnk1d	exon	ENSMUSG00000025162	ProperStrand	37	1	-16.3783
chr11	19972492	19972560	protein_coding	Actr2	exon	ENSMUSG00000020152	ProperStrand	72	chr19	8799833	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	4	-14.5236
chr7	25766791	25766871	protein_coding	Atp1a3	exon	ENSMUSG00000040907	ProperStrand	66	chr5	115691946	115692036	protein_coding	Rnf10	utr3	ENSMUSG00000041740	ProperStrand	95	1	-12.1981
chrX	131226513	131226553	protein_coding	Armcx4	exon	ENSMUSG00000049804	ProperStrand	15	chr16	23110926	23110963	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-3.8284
chr10	18397639	18397655	protein_coding	D10Bwg1379e	exon	ENSMUSG00000019852	ProperStrand	7	chr4	44180542	44180559	protein_coding	Rnf38	utr5	ENSMUSG00000035696	ProperStrand	66	1	-17.5048
chr7	26029872	26029962	protein_coding	Erf	exon	ENSMUSG00000040857	NonProperStrand	3	chr4	131865853	131865943	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	NonProperStrand	39	1	-19.3826
chr9	78023109	78023170	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr9	15068052	15068081	protein_coding	Med17	exon	ENSMUSG00000031935	ProperStrand	135	1	-4.3104
chr11	76026670	76026779	protein_coding	Glod4	utr3	ENSMUSG00000017286	ProperStrand	23	chr15	98350146	98350170	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-6.6496
chr12	36818778	36818802	protein_coding	Bzw2	utr3	ENSMUSG00000020547	ProperStrand	29	chr7	29136574	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.6651
chrX	84483698	84483750	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr17	24856658	24856748	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-1.7827
chr12	41318988	41319033	protein_coding	Dock4	intron	ENSMUSG00000035954	ProperStrand	41	chr10	110918548	110918639	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-4.1605
chr15	34372533	34372806	protein_coding	Rpl30	utr5	ENSMUSG00000058600	ProperStrand	65	chr1	39605591	39605687	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	12	-20.7375
chr5	125199662	125199742	protein_coding	Atp6v0a2	intron	ENSMUSG00000038023	ProperStrand	31	chr3	68889071	68889161	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-4.4957
chr9	64023263	64023329	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	chr6	71832647	71832687	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-1.3146
chr3	108161661	108161761	protein_coding	Sort1	utr3	ENSMUSG00000068747	ProperStrand	32	chr17	24665432	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	2	-10.0450
chr9	108962839	108962855	protein_coding	Atrip	exon	ENSMUSG00000025646	NonProperStrand	1	chr9	15119631	15119705	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-inf
chr2	164297691	164297781	protein_coding-noncoding	Sys1	utr3	ENSMUSG00000045503	ProperStrand	1	chr11	97643006	97643086	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-inf
chr8	73779415	73779453	protein_coding	Haus8	exon	ENSMUSG00000035439	ProperStrand	12	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-11.0003
chr4	125386156	125386176	protein_coding	Grik3	utr3	ENSMUSG00000001985	ProperStrand	126	chr10	63552101	63552119	protein_coding	Lrrtm3	exon	ENSMUSG00000042846	ProperStrand	63	1	-11.7256
chr12	82050713	82050787	protein_coding	Srsf5	exon	ENSMUSG00000021134	ProperStrand	68	chr7	52381969	52382012	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	3	-14.7535
chr9	15130706	15130806	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	chr1	162965534	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-1.5407
chr6	115755557	115755647	protein_coding	Rpl32	utr3	ENSMUSG00000057841	ProperStrand	137	chr11	69481364	69481444	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-1.8008
chr11	102170252	102171848	protein_coding	Ubtf	exon	ENSMUSG00000020923	ProperStrand	66	chr11	69483136	69483230	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	4	-8.4548
chr9	63868722	63868739	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	chr15	79913294	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	3	-1.2316
chr12	111929750	111933736	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr11	69483134	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	8	-1.8026
chr12	73571042	73571060	protein_coding	Lrrc9	intron	ENSMUSG00000021090	ProperStrand	3	chr2	26493456	26493499	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-9.9740
chrX	70237450	70237471	miRNA	Mir2137	.	ENSMUSG00000089357	ProperStrand	50	chr7	34992750	34992767	protein_coding	Gpi1	exon	ENSMUSG00000036427	NonProperStrand	40	1	-14.5019
chr9	15119733	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	chr12	110887819	110887899	snoRNA	ENSMUSG00000084549_SNORD113	.	ENSMUSG00000084549	ProperStrand	196	1	-0.8628
chr16	34721882	34721934	protein_coding	Ccdc14	exon	ENSMUSG00000022833	ProperStrand	22	chr3	133129425	133129445	protein_coding	Tet2	utr3	ENSMUSG00000040943	ProperStrand	192	2	-21.3302
chr1	162966217	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	chr16	23109027	23109087	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-1.9303
chr1	53409486	53409502	protein_coding	Asnsd1	utr5	ENSMUSG00000026095	NonProperStrand	105	chr5	73446035	73446081	protein_coding	Fryl	exon	ENSMUSG00000070733	ProperStrand	173	1	-10.0649
chr4	134881143	134883044	protein_coding	Srrm1	exon	ENSMUSG00000028809	ProperStrand	142	chr19	8963027	8963085	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-0.9990
chr1	74725930	74726445	protein_coding	Ttll4	exon	ENSMUSG00000033257	ProperStrand	24	chr9	15119631	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-7.2461
chr19	9078570	9078689	protein_coding	Ahnak	exon	ENSMUSG00000069833	ProperStrand	103	chr7	16524109	16524137	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	1	-8.6358
chr18	66795634	66795651	Simple_repeat	(CGAGG)n	Simple_repeat	chr18(CGAGG)n66795546	ProperStrand	4	chr17	23893567	23893655	protein_coding	Flywch1	exon	ENSMUSG00000040097	ProperStrand	15	1	-21.2797
chr13	74497433	74497452	protein_coding	Ccdc127	utr3	ENSMUSG00000021578	ProperStrand	12	chr19	8800093	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	2	-17.0485
chr5	116662823	116662839	protein_coding	Ccdc60	intron	ENSMUSG00000043913	NonProperStrand	4	chr1	162965979	162966008	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-9.1328
chr5	74489202	74489261	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr18	36885433	36885449	protein_coding	Cd14	exon	ENSMUSG00000051439	ProperStrand	65	1	-5.4653
chr7	134461638	134461658	protein_coding	Itgal	intron	ENSMUSG00000030830	ProperStrand	38	chr16	23110906	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.7634
chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	chr1	174210708	174210726	protein_coding	Igsf8	intron	ENSMUSG00000038034	ProperStrand	25	1	-10.9784
chr6	8177970	8178077	protein_coding	Mios	exon	ENSMUSG00000042447	ProperStrand	4	chr10	40368475	40368492	protein_coding	Ddo	utr3	ENSMUSG00000063428	NonProperStrand	9	1	-19.8837
chr5	34211950	34212036	protein_coding	Whsc1	utr3	ENSMUSG00000057406	ProperStrand	409	chr17	13112514	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-1.2850
chr9	6646961	6646984	SINE	ID_B1	B4	chr9ID_B16646850	ProperStrand	1	chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	1	-inf
chr15	78173664	78173681	protein_coding	Csf2rb	intron	ENSMUSG00000071713	ProperStrand	16	chr11	83107805	83107903	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	1	-11.5192
chr19	61301464	61301481	protein_coding	Csf2ra	exon	ENSMUSG00000059326	ProperStrand	17	chr10	90581217	90581282	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-7.3094
chr4	131866240	131866292	lincRNA	Snhg12	exon	ENSMUSG00000086290	ProperStrand	178	chr7	3296850	3296913	protein_coding	Myadm	exon	ENSMUSG00000068566	ProperStrand	31	1	-12.4649
chr5	101237349	101237372	protein_coding	Fam175a	intron	ENSMUSG00000035234	NonProperStrand	7	chr9	15119716	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-6.8089
chr12	110887828	110887894	snoRNA	ENSMUSG00000084549_SNORD113	.	ENSMUSG00000084549	ProperStrand	196	chr12	106269284	106269323	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-2.0404
chr4	43505656	43505684	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr8	129468723	129468823	protein_coding	Tomm20	intron	ENSMUSG00000058779	ProperStrand	55	1	-3.2273
chr8	96697235	96697267	protein_coding	Mt2	exon	ENSMUSG00000031762	ProperStrand	71	chr2	144087421	144087464	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-6.2129
chr6	17414095	17414142	protein_coding	Met	utr5	ENSMUSG00000009376	ProperStrand	32	chr15	55449225	55449242	protein_coding	Mtbp	exon	ENSMUSG00000022369	ProperStrand	12	1	-17.6993
chr4	45108392	45108413	LINE	Lx6	L1	chr4Lx645106017	ProperStrand	4	chr18	35716762	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-inf
chr10	127521233	127521269	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	chr11	62418013	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-1.5251
chr11	4583718	4583833	protein_coding	Ascc2	utr3	ENSMUSG00000020412	ProperStrand	27	chr12	112779252	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-6.3441
mmu-miR-6240	1	23	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	6	-13.6604
chr16	23110454	23110578	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	chr12	81492645	81492735	snoRNA	ENSMUSG00000088158_Scarna3b	.	ENSMUSG00000088158	ProperStrand	147	22	-inf
chr19	8798740	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	chr16	18240811	18240911	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	1	-1.2081
chrX	71589885	71589905	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr10	23505151	23505268	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	8	-2.5207
chr18	10052128	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr12	106269284	106269553	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	5	-4.5226
chr2	90235304	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	127828233	127828292	protein_coding	Ankrd52	utr3	ENSMUSG00000014498	ProperStrand	26	1	-6.0972
chr11	11867676	11870430	protein_coding	Grb10	exon	ENSMUSG00000020176	ProperStrand	11	chr14	118998733	119003383	protein_coding	Abcc4	exon	ENSMUSG00000032849	ProperStrand	137	1	-15.1325
chrX	98988704	98988765	Simple_repeat	(CAG)n	Simple_repeat	chrX(CAG)n98988592	NonProperStrand	1	chr7	114886563	114886579	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	1	-inf
chr19	8799011	8799053	lincRNA	Snhg1	exon	ENSMUSG00000090867	ProperStrand	100	chr19	8799053	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	2	-7.9934
chr9	44142814	44142881	protein_coding	H2afx	utr5	ENSMUSG00000049932	ProperStrand	137	chr11	51551290	51551380	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	1	-6.0647
chr2	179322378	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	2	-11.0921
chr9	56804981	56810866	protein_coding	Snupn	exon	ENSMUSG00000055334	ProperStrand	16	chr7	29136621	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.8105
chr15	34372462	34372488	protein_coding	Rpl30	exon	ENSMUSG00000058600	ProperStrand	65	chr7	150717370	150717416	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	2	-8.7762
chr1	183853750	183853767	protein_coding	Enah	exon	ENSMUSG00000022995	NonProperStrand	33	chr2	144087324	144087446	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-7.7387
chr3	130936927	130936954	protein_coding	Hadh	utr3	ENSMUSG00000027984	ProperStrand	35	chr15	98350145	98350255	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	6	-inf
chr14	32322236	32322326	protein_coding	Eaf1	utr3	ENSMUSG00000021890	ProperStrand	10	chr10	90581059	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-8.4049
chr2	158185574	158185665	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr7	52382775	52382838	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	10	-14.3126
chr5	112865459	112865475	protein_coding	Sez6l	exon	ENSMUSG00000058153	ProperStrand	81	chr17	39985543	39985677	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-5.3450
chr14	54862421	54862460	protein_coding	Dad1	exon	ENSMUSG00000022174	ProperStrand	11	chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	1	-12.6504
chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	chr9	120037933	120037992	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-1.8281
chr4	126559848	126566767	protein_coding	Zmym4	exon	ENSMUSG00000042446	ProperStrand	94	chr2	26768382	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-4.7310
chr19	30173205	30173305	protein_coding	Gldc	utr3	ENSMUSG00000024827	ProperStrand	175	chr1	162967538	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-1.6570
chr12	71386230	71386247	protein_coding	Trim9	intron	ENSMUSG00000021071	NonProperStrand	75	chr11	119842623	119842708	protein_coding	Baiap2	intron	ENSMUSG00000025372	ProperStrand	9	1	-16.6880
chr5	114221454	114221544	protein_coding	Sart3	exon	ENSMUSG00000018974	ProperStrand	50	chr3	68889027	68889107	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-3.5913
chr11	42440243	42440259	protein_coding	Gabrb2	exon	ENSMUSG00000007653	ProperStrand	248	chr17	35089183	35089229	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-2.8280
chr10	126741829	126741845	protein_coding	Mars	intron	ENSMUSG00000040354	NonProperStrand	3	chr2	158185625	158185653	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-12.8309
chr1	78964580	78964661	protein_coding	Gm5830	exon	ENSMUSG00000072978	ProperStrand	1	chr2	167443401	167457453	protein_coding	Gm20431	exon	ENSMUSG00000089739	ProperStrand	81	1	-inf
chr2	155649098	155649694	protein_coding	Eif6	exon	ENSMUSG00000027613	ProperStrand	42	chr9	15119740	15119970	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.2646
chr13	52378447	52378474	Low_complexity	GC_rich	Low_complexity	chr13GC_rich52378446	NonProperStrand	1	chrX	34622919	34623010	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-inf
chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	chr1	162968212	162968237	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-3.4070
chr14	11994525	11994543	protein_coding	Fhit	utr5	ENSMUSG00000060579	NonProperStrand	51	chr11	62418024	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	3	-13.5837
chr4	43505840	43505930	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr6	124401475	124406899	protein_coding	Clstn3	exon	ENSMUSG00000008153	ProperStrand	10	1	-6.5547
chr19	59037361	59037377	protein_coding	Eno4	exon	ENSMUSG00000048029	NonProperStrand	14	chr17	35089181	35089232	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-8.4048
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr13	54763278	54763334	protein_coding	Faf2	utr3	ENSMUSG00000025873	ProperStrand	90	1	-3.6990
chr15	103072878	103073122	protein_coding	Hnrnpa1	exon	ENSMUSG00000046434	ProperStrand	68	chr5	108336363	108336406	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-4.6400
chr2	174171046	174171232	protein_coding	Gnas	utr3	ENSMUSG00000027523	ProperStrand	41	chr1	129228487	129228518	snoRNA	ENSMUSG00000093146_AC131793.1	.	ENSMUSG00000093146	ProperStrand	119	1	-12.7073
chr8	72287172	72287188	protein_coding	Zfp866	utr3	ENSMUSG00000043090	NonProperStrand	134	chr10	21325688	21325704	protein_coding	1700020N01Rik	intron	ENSMUSG00000050844	ProperStrand	12	1	-14.9838
chr13	114947292	114947311	protein_coding	Arl15	utr3	ENSMUSG00000042348	ProperStrand	51	chr17	39985351	39985406	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-6.2527
chr7	20036905	20036921	protein_coding	Mark4	exon	ENSMUSG00000030397	NonProperStrand	45	chr17	35089181	35089229	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	2	-9.8443
chr4	116826699	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	chr8	32260332	32260427	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	10	-6.0698
chr11	97642952	97643039	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	chr11	106874224	106874254	tRNA	tRNA945-ArgCCG	.	482371	ProperStrand	133	2	-2.3755
chr14	33379569	33379996	protein_coding	Ercc6	exon	ENSMUSG00000054051	ProperStrand	19	chr2	166890558	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-9.8795
chr18	36907874	36908301	protein_coding	Ik	exon	ENSMUSG00000024474	ProperStrand	60	chr10	23505152	23505258	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	8	-13.6242
chr2	153225604	153225682	protein_coding	Asxl1	exon	ENSMUSG00000042548	ProperStrand	76	chr17	24665422	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	15	-19.4183
chr2	26493362	26493484	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr7	134671394	134671504	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	6	-2.6159
chr17	56567467	56567484	protein_coding	Ptprs	exon	ENSMUSG00000013236	NonProperStrand	4	chr4	131866176	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-9.1999
chr11	69481335	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	chr2	91436233	91436336	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	6	-0.9923
chr19	37494997	37495726	protein_coding	Kif11	utr3	ENSMUSG00000012443	ProperStrand	29	chr16	23110965	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-5.1035
chr7	31746347	31746385	protein_coding-noncoding	Lsr	utr3	ENSMUSG00000001247	ProperStrand	3	chr13	38605012	38610921	protein_coding	Txndc5	exon	ENSMUSG00000038991	ProperStrand	48	1	-19.6041
chrX	11635848	11635865	protein_coding	Bcor	exon	ENSMUSG00000040363	NonProperStrand	293	chr15	79908930	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	2	-4.4385
chr15	77591660	77591760	protein_coding	Myh9	utr3	ENSMUSG00000022443	ProperStrand	570	chr5	74489620	74489674	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	10	-10.8692
chr18	80909719	80909738	protein_coding	Nfatc1	utr5	ENSMUSG00000033016	ProperStrand	35	chr3	68889148	68889266	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	3	-10.3395
chr10	28074572	28103291	protein_coding	Ptprk	exon	ENSMUSG00000019889	ProperStrand	45	chr1	155287312	155287355	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	2	-15.1100
chrX	66045890	66045982	protein_coding	Fmr1nb	intron	ENSMUSG00000062170	ProperStrand	7	chr1	173433177	173433202	protein_coding	B930036N10Rik	utr3	ENSMUSG00000091993	ProperStrand	150	3	-20.1837
chr4	132530097	132530117	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	chr4	138965607	138966021	protein_coding	Ubr4	exon	ENSMUSG00000066036	ProperStrand	304	1	-6.3731
chr11	117604367	117610560	protein_coding	Tnrc6c	exon	ENSMUSG00000025571	ProperStrand	51	chr8	97855793	97855810	protein_coding	Zfp319	utr5	ENSMUSG00000046556	ProperStrand	2	1	-inf
chr15	35867009	35867883	protein_coding	Cox6c	utr5	ENSMUSG00000014313	ProperStrand	10	chr16	23111403	23111503	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.3721
chr9	62699596	62699619	protein_coding	Cln6	utr3	ENSMUSG00000032245	ProperStrand	34	chr7	148634711	148634801	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-5.0758
chr10	79086780	79086797	protein_coding	Shc2	intron	ENSMUSG00000020312	NonProperStrand	5	chr18	73693113	73693138	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-10.6437
chr9	114781387	114781403	SINE	B4A	B4	chr9B4A114781356	ProperStrand	3	chr7	116663640	116663758	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-8.5982
chr11	62416578	62416647	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	chr11	106362603	106362640	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	2	-1.0098
chr8	73654402	73654492	LINE	Lx4A	L1	chr8Lx4A73654305	NonProperStrand	1	chr8	73654174	73654264	LTR	RMER13B	ERVK	chr8RMER13B73653970	NonProperStrand	1	1	-inf
chr11	119660763	119673282	protein_coding	Rptor	exon	ENSMUSG00000025583	ProperStrand	76	chr19	8799581	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-6.2990
chr4	118808466	118809590	protein_coding	Slc2a1	utr3	ENSMUSG00000028645	ProperStrand	361	chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	3	-11.8560
chr12	110892840	110892904	snoRNA	ENSMUSG00000064621_AF357355	.	ENSMUSG00000064621	ProperStrand	60	chr1	162966237	162966269	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-7.5760
chr4	135423725	135423790	protein_coding	Srsf10	utr3	ENSMUSG00000028676	ProperStrand	31	chr10	110918599	110918634	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	3	-11.2439
chr2	115594580	115594599	protein_coding	BC052040	intron	ENSMUSG00000040282	ProperStrand	20	chr19	27837820	27837836	protein_coding	Rfx3	utr3	ENSMUSG00000040929	ProperStrand	92	1	-14.6857
chr18	24443494	24443518	protein_coding	Galnt1	utr3	ENSMUSG00000000420	ProperStrand	158	chr19	7532308	7532324	protein_coding	Rtn3	exon	ENSMUSG00000024758	ProperStrand	35	1	-12.4585
chr14	27199812	27199828	antisense	4933413J09Rik	.	ENSMUSG00000021874	ProperStrand	51	chr11	60132374	60132413	protein_coding	Tom1l2	intron	ENSMUSG00000000538	ProperStrand	3	1	-inf
chr11	60231328	60238308	protein_coding	4933439F18Rik	exon	ENSMUSG00000018415	ProperStrand	26	chr5	121655031	121655094	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.3544
chr14	41569097	41569177	LINE	Lx5	L1	chr14Lx541568925	NonProperStrand	1	chr11	77130866	77130956	protein_coding	Ssh2	intron	ENSMUSG00000037926	ProperStrand	18	1	-inf
chr9	15130909	15130989	snoRNA	ENSMUSG00000077394_snoU2_19	.	ENSMUSG00000077394	ProperStrand	96	chr6	71832579	71832669	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	2	-7.7827
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr3	107994146	107994186	protein_coding	Amigo1	utr3	ENSMUSG00000050947	ProperStrand	22	1	-8.9418
chr11	69002198	69002214	protein_coding	Alox8	exon	ENSMUSG00000020891	NonProperStrand	31	chr17	45705336	45705395	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	1	-8.0506
chr4	118805131	118809606	protein_coding	Slc2a1	utr3	ENSMUSG00000028645	ProperStrand	361	chrX	34622960	34623021	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	6	-5.5659
chr13	69765939	69765971	protein_coding	Nsun2	exon	ENSMUSG00000021595	ProperStrand	110	chr11	6374930	6374946	protein_coding	Purb	exon	ENSMUSG00000091207	ProperStrand	16	2	-inf
chr5	64670642	64673148	protein_coding	Tbc1d1	exon	ENSMUSG00000029174	ProperStrand	44	chr1	162967514	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-6.8163
chr17	34472788	34472804	protein_coding	H2-Eb2	exon	ENSMUSG00000067341	NonProperStrand	17	chr9	120038495	120038554	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.4412
chr5	31378392	31378466	protein_coding	Cad	exon	ENSMUSG00000013629	ProperStrand	260	chr7	148634789	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-1.4806
chr6	52589223	52589253	protein_coding	Hibadh	intron	ENSMUSG00000029776	ProperStrand	33	chrX	97689753	97689850	protein_coding	Igbp1	exon	ENSMUSG00000031221	ProperStrand	33	3	-19.0599
chr8	73032371	73033252	protein_coding	2810422J05Rik	exon	ENSMUSG00000055553	ProperStrand	171	chr15	79913288	79913346	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-3.2750
chr11	102060738	102060754	protein_coding	Hdac5	exon	ENSMUSG00000008855	NonProperStrand	39	chr14	76247754	76247842	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-4.9994
chr3	82863814	82864986	protein_coding	Plrg1	exon	ENSMUSG00000027998	ProperStrand	16	chr16	23111385	23111475	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	5	-15.4086
chr18	10052131	10052153	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr1	192777775	192777792	protein_coding	Vash2	intron	ENSMUSG00000037568	ProperStrand	34	1	-9.9448
chr10	80854754	80854844	SINE	B1_Mur4	Alu	chr10B1_Mur480854712	NonProperStrand	1	chr10	79046423	79046503	protein_coding	Theg	intron	ENSMUSG00000020317	NonProperStrand	1	1	-inf
chr5	30111576	30111656	protein_coding	Dnajb6	utr3	ENSMUSG00000029131	ProperStrand	81	chr9	15130707	15130797	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	1	-8.6121
chr2	26493463	26493518	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr15	75756082	75756228	protein_coding	Tsta3	exon	ENSMUSG00000022570	ProperStrand	38	1	-7.1020
chr14	8075850	8075940	protein_coding	Gm3715	intron	ENSMUSG00000072731	NonProperStrand	1	chr14	4214703	4214793	protein_coding	Gm8108	intron	ENSMUSG00000091563	NonProperStrand	1	1	-inf
chr9	53287714	53287731	protein_coding	Atm	exon	ENSMUSG00000034218	NonProperStrand	7	chr2	91436228	91436333	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-11.9119
chrX	93152102	93152192	protein_coding	Las1l	utr5	ENSMUSG00000057421	ProperStrand	248	chr11	97641510	97641590	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	1	-5.0645
chr5	140913356	140915897	protein_coding	Eif3b	exon	ENSMUSG00000056076	ProperStrand	66	chr18	35102297	35102342	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	2	-10.3631
chr9	108849914	108850617	protein_coding	Uqcrc1	exon	ENSMUSG00000025651	ProperStrand	43	chr19	8963027	8963044	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.8490
chr3	100735459	100735476	protein_coding	Trim45	exon	ENSMUSG00000033233	ProperStrand	59	chr18	84731566	84731628	protein_coding	Zfp407	exon	ENSMUSG00000048410	ProperStrand	34	1	-14.4902
chr4	154530771	154530788	protein_coding	Ski	utr3	ENSMUSG00000029050	ProperStrand	28	chr11	97642952	97643059	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.8483
chr4	138660976	138661773	protein_coding	Minos1	exon	ENSMUSG00000050608	ProperStrand	11	chr15	98356817	98356913	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	8	-19.3192
chr6	83453194	83453261	protein_coding	Dguok	intron	ENSMUSG00000014554	ProperStrand	10	chr7	29136574	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.7572
chr8	26630484	26630568	protein_coding	Fgfr1	intron	ENSMUSG00000091895	ProperStrand	16	chr16	23110961	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-5.6614
chr4	43505776	43505876	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr19	38599508	38599524	protein_coding	Plce1	exon	ENSMUSG00000024998	ProperStrand	20	2	-8.5305
chr6	125051980	125052017	protein_coding	Chd4	exon	ENSMUSG00000063870	ProperStrand	303	chr6	131330313	131330362	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	ProperStrand	408	2	-10.1279
chr11	116535953	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr2	166890780	166890834	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	1	-3.1382
chr7	25711377	25711449	protein_coding	Arhgef1	utr3	ENSMUSG00000040940	ProperStrand	13	chr15	79908957	79908985	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-8.5451
chr19	11857619	11859888	protein_coding	Stx3	exon	ENSMUSG00000041488	ProperStrand	37	chr9	64024951	64024998	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	2	-15.9331
chr11	116722402	116722851	protein_coding	Mfsd11	exon	ENSMUSG00000020818	ProperStrand	9	chr9	103950068	103950086	protein_coding	Uba5	intron	ENSMUSG00000032557	ProperStrand	111	1	-15.9573
chr2	121949510	121949528	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	chr6	115758011	115758115	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-2.6683
chr2	168608055	168608145	SINE	B3	B2	chr2B3168608047	ProperStrand	1	chr2	168608302	168608392	SINE	RSINE1	B4	chr2RSINE1168608308	ProperStrand	1	1	-inf
chr7	13516165	13516190	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr14	31827478	31827545	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-2.5542
chr7	126860387	126860444	protein_coding	Thumpd1	exon	ENSMUSG00000030942	ProperStrand	14	chr8	74844875	74844975	protein_coding	Klf2	utr3	ENSMUSG00000055148	ProperStrand	82	2	-inf
chr10	90581038	90581147	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	chr15	79908929	79909020	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	18	-9.0887
chr11	20125682	20125703	protein_coding	Rab1	utr3	ENSMUSG00000020149	ProperStrand	32	chr9	120038576	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	3	-10.2319
chr16	96224249	96224339	protein_coding	Brwd1	exon	ENSMUSG00000022914	ProperStrand	77	chr5	122907293	122907345	protein_coding	Atp2a2	exon	ENSMUSG00000029467	ProperStrand	166	1	-10.7697
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr8	13876099	13876226	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	2	-5.0728
chr16	96346408	96346432	protein_coding	Hmgn1	exon	ENSMUSG00000040681	ProperStrand	38	chr15	71624760	71624799	snoRNA	ENSMUSG00000088895_SNORA81	.	ENSMUSG00000088895	ProperStrand	348	1	-10.7122
chr19	42637764	42637794	protein_coding	D19Ertd386e	exon	ENSMUSG00000025184	ProperStrand	4	chr2	130101243	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	2	-20.3992
chr2	162915296	162915315	LTR	RLTR11B	ERVK	chr2RLTR11B162915116	ProperStrand	29	chr11	96818793	96818893	protein_coding	Sp2	exon	ENSMUSG00000018678	ProperStrand	11	1	-18.1094
chr10	24316299	24316546	protein_coding	Ctgf	exon	ENSMUSG00000019997	ProperStrand	2	chr9	15118348	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-10.7700
chr11	62418013	62418039	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr11	48616656	48616706	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	4	-15.6260
chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr5	66542126	66542142	protein_coding	Rbm47	utr5	ENSMUSG00000070780	NonProperStrand	4	2	-14.9731
chr2	35834932	35834950	protein_coding	Ttll11	utr5	ENSMUSG00000026885	NonProperStrand	9	chr7	35549700	35549794	protein_coding	Chst8	intron	ENSMUSG00000060402	ProperStrand	4	1	-19.7249
chr14	6152968	6153058	protein_coding	Gm8206	intron	ENSMUSG00000091568	ProperStrand	8	chr4	131908814	131908897	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	8	-inf
chr6	3794653	3794670	SINE	B4A	B4	chr6B4A3794525	NonProperStrand	26	chr4	131908255	131908344	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.7765
chr4	34602180	34603420	protein_coding	Rars2	exon	ENSMUSG00000028292	ProperStrand	9	chr7	150717360	150717425	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	3	-inf
chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	chr5	130295414	130295500	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	5	-7.2477
chr1	34246878	34246958	protein_coding	Dst	utr5	ENSMUSG00000026131	ProperStrand	461	chr17	35299510	35299600	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	2	-2.4123
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr11	6519827	6519917	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-5.0867
chr2	161033786	161033803	lincRNA	Gm14243	intron	ENSMUSG00000067745	NonProperStrand	1	chr9	64022854	64022906	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-inf
chr1	165069831	165069847	LINE	Lx8	L1	chr1Lx8165069770	ProperStrand	5	chr8	87366539	87366599	protein_coding	Calr	utr3	ENSMUSG00000003814	ProperStrand	232	1	-15.7744
chr17	87832957	87832981	protein_coding	Calm2	utr3	ENSMUSG00000036438	ProperStrand	59	chr14	76247737	76247834	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	5	-16.9901
chr5	65213363	65213402	protein_coding	Klf3	exon	ENSMUSG00000029178	ProperStrand	56	chr19	8800373	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	3	-9.0484
chr7	95266597	95266613	protein_coding	Grm5	intron	ENSMUSG00000049583	NonProperStrand	145	chr6	71832629	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-3.9191
chr10	122002854	122002944	LINE	L1Md_F2	L1	chr10L1Md_F2122002095	ProperStrand	17	chrX	155778375	155778455	protein_coding	Rps6ka3	intron	ENSMUSG00000031309	NonProperStrand	7	1	-inf
chr9	48808531	48809700	protein_coding	Usp28	exon	ENSMUSG00000032267	ProperStrand	63	chr5	130300460	130300540	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-4.2951
chr16	35812584	35824864	protein_coding	Hspbap1	intron	ENSMUSG00000022849	ProperStrand	48	chr16	23110862	23110955	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.1542
chr5	103854542	103854558	protein_coding	Ptpn13	utr5	ENSMUSG00000034573	NonProperStrand	74	chr3	68889149	68889228	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-2.8809
chr2	25312429	25313191	protein_coding	Clic3	exon	ENSMUSG00000015093	ProperStrand	79	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-10.2103
chrX	103300564	103300580	protein_coding	Atp7a	exon	ENSMUSG00000033792	NonProperStrand	2	chr10	23505152	23505204	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-8.0476
chr11	88790571	88791531	protein_coding	Scpep1	exon	ENSMUSG00000000278	ProperStrand	54	chr6	115757989	115758079	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-5.6783
chr7	151563564	151563644	antisense	Gm14372	.	ENSMUSG00000085745	ProperStrand	3	chr3	152982688	152982778	protein_coding	St6galnac3	intron	ENSMUSG00000052544	ProperStrand	19	1	-inf
chr2	37452270	37452359	protein_coding	Strbp	exon	ENSMUSG00000026915	ProperStrand	90	chr10	80641693	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	1	-6.7426
chr4	135494992	135495008	protein_coding	Fuca1	exon	ENSMUSG00000028673	ProperStrand	16	chr19	8799030	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	2	-13.5765
chr6	74749723	74749813	LINE	L1Md_F2	L1	chr6L1Md_F274749351	NonProperStrand	1	chr6	74749833	74749923	LINE	L1Md_F2	L1	chr6L1Md_F274749740	NonProperStrand	1	1	-inf
chr9	114317099	114317181	protein_coding	Glb1	intron	ENSMUSG00000045594	ProperStrand	67	chr2	158185530	158185618	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-6.2679
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr14	76245206	76245242	protein_coding	Tpt1	utr5	ENSMUSG00000060126	ProperStrand	236	1	-4.3594
chr18	61236827	61236844	protein_coding	Pdgfrb	intron	ENSMUSG00000024620	NonProperStrand	37	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.5639
chr2	152934308	152934324	protein_coding	Hck	utr5	ENSMUSG00000003283	NonProperStrand	2	chr5	121655016	121655126	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-11.0755
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	1	-4.0201
chr4	132722512	132722529	protein_coding	Wasf2	intron	ENSMUSG00000028868	ProperStrand	56	chr18	75979993	75980011	protein_coding	Zbtb7c	utr5	ENSMUSG00000044646	ProperStrand	64	1	-13.3219
chr7	19725278	19725368	SINE	B1F1	Alu	chr7B1F119725252	ProperStrand	1	chr7	19725111	19725191	SINE	B1_Mur4	Alu	chr7B1_Mur419725057	NonProperStrand	1	1	-inf
chr4	153393985	153394085	protein_coding	Lrrc47	utr3	ENSMUSG00000029028	ProperStrand	30	chr13	113342172	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	4	-inf
chr1	173314866	173314882	protein_coding	Pvrl4	exon	ENSMUSG00000006411	NonProperStrand	1	chr17	24665420	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-inf
chr8	121426001	121426018	protein_coding	Cdh13	intron	ENSMUSG00000031841	ProperStrand	60	chr11	6428123	6428154	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.1922
chr5	116052463	116052563	protein_coding	Gcn1l1	exon	ENSMUSG00000041638	ProperStrand	408	chr16	23109047	23109090	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-3.5781
chr2	28615596	28665188	protein_coding	Ak8	exon	ENSMUSG00000026807	NonProperStrand	21	chr4	131908809	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.9128
chr7	29574015	29575352	protein_coding	Rinl	utr5	ENSMUSG00000051735	ProperStrand	10	chr3	68889049	68889145	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-6.7595
chr18	36700414	36700431	protein_coding	Slc4a9	exon	ENSMUSG00000024485	ProperStrand	13	chr1	141319671	141319687	protein_coding	Zbtb41	utr5	ENSMUSG00000033964	NonProperStrand	145	1	-14.6624
chr16	13332970	13332986	protein_coding	Mkl2	utr3	ENSMUSG00000009569	ProperStrand	55	chr2	22444766	22444823	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	2	-12.6982
chr6	115560549	115560640	protein_coding	Mkrn2	exon	ENSMUSG00000000439	ProperStrand	60	chr11	98878377	98878457	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	46	-19.4092
chr12	87485833	87485913	protein_coding	1700019E19Rik	intron	ENSMUSG00000007867	ProperStrand	1	chr15	98356816	98356906	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	1	-inf
chr7	4876388	4876405	protein_coding	Nat14	utr3	ENSMUSG00000035285	ProperStrand	3	chr5	54033375	54033396	protein_coding	Rbpj	exon	ENSMUSG00000039191	ProperStrand	96	1	-18.7103
chr18	71434371	71434390	protein_coding	Dcc	intron	ENSMUSG00000060534	NonProperStrand	29	chr9	120038553	120038673	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.3936
chr2	26493382	26493470	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr17	71990221	71990297	snoRNA	ENSMUSG00000092887_Snord53	.	ENSMUSG00000092887	ProperStrand	53	3	-9.7074
chrX	55437636	55437653	pseudogene	Gm14649	.	ENSMUSG00000081837	NonProperStrand	5	chr2	130101241	130101308	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-11.7344
chr11	6428091	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr4	41158542	41158579	snoRNA	ENSMUSG00000089308_SNORD121A	.	ENSMUSG00000089308	ProperStrand	209	3	-3.6315
chr4	32891137	32891212	protein_coding	Ankrd6	utr3	ENSMUSG00000040183	ProperStrand	15	chr8	129468746	129468814	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	7	-inf
chr5	74489252	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	NonProperStrand	6	chr10	5987569	5987659	protein_coding	Akap12	utr3	ENSMUSG00000038587	NonProperStrand	3	1	-inf
chr1	95523506	95523596	protein_coding-noncoding	Stk25	utr3	ENSMUSG00000026277	ProperStrand	1	chr1	133252371	133252451	protein_coding	Srgap2	intron	ENSMUSG00000026425	ProperStrand	299	1	-inf
chr8	125979375	125979465	protein_coding	Def8	exon	ENSMUSG00000001482	ProperStrand	19	chr4	131866155	131866235	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-5.8910
chr6	29490986	29491037	protein_coding	Tnpo3	utr3	ENSMUSG00000012535	ProperStrand	58	chr1	71688629	71689557	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	1	-7.9009
chr19	6084059	6084368	protein_coding	Zfpl1	exon	ENSMUSG00000024792	NonProperStrand	1	chr4	131908409	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-inf
chr10	80644723	80644781	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr13	46765144	46765160	protein_coding	C78339	exon	ENSMUSG00000069237	NonProperStrand	104	1	-5.0252
chr8	125408213	125418224	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	chr7	117189957	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	5	-4.4019
chr2	38279549	38279639	lincRNA	Gm13589	exon	ENSMUSG00000085950	NonProperStrand	31	chr3	123210899	123210979	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.2114
chr1	152270735	152270753	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	chr2	179917109	179917158	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	2	-8.7423
chr11	115940181	115940228	protein_coding	Wbp2	utr3	ENSMUSG00000034341	ProperStrand	39	chr4	131908357	131908439	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.0833
chr7	59610557	59610573	LTR	LTR16C	ERVL	chr7LTR16C59610508	ProperStrand	1	chr1	71650402	71650489	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	1	-inf
chr7	5018063	5031476	protein_coding	U2af2	utr3	ENSMUSG00000030435	ProperStrand	103	chr5	74489598	74489678	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	2	-4.8674
chr17	39985127	39985154	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr10	23505559	23505627	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	4	-4.4074
chr16	17258731	17258781	protein_coding	Hic2	exon	ENSMUSG00000050240	ProperStrand	36	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	4	-11.1773
chr9	63066908	63066926	protein_coding	Map2k5	intron	ENSMUSG00000058444	NonProperStrand	79	chr1	162965531	162965554	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.7847
chr6	128206687	128206743	protein_coding	Tead4	intron	ENSMUSG00000030353	ProperStrand	14	chr16	23110828	23110873	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-6.1935
chr1	34259164	34259193	protein_coding	Dst	intron	ENSMUSG00000026131	ProperStrand	461	chr8	3568023	3568039	protein_coding	C330021F23Rik	utr5	ENSMUSG00000065952	NonProperStrand	85	1	-8.5329
chrX	12869281	12869297	protein_coding	Ddx3x	utr3	ENSMUSG00000000787	NonProperStrand	2	chr2	57090809	57090826	protein_coding	Gpd2	utr5	ENSMUSG00000026827	ProperStrand	93	2	-inf
chr1	162968443	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	chr2	26768054	26768094	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	1	-1.6234
chr3	95749778	95749808	protein_coding	Anp32e	utr3	ENSMUSG00000015749	ProperStrand	25	chr11	62416575	62416654	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	3	-15.7231
chr14	58452092	58452126	protein_coding	Zdhhc20	utr3	ENSMUSG00000021969	ProperStrand	10	chr4	131908686	131908751	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-10.8073
chr15	5067382	5067678	protein_coding	Rpl37	exon	ENSMUSG00000041841	ProperStrand	69	chr18	35716699	35716761	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.9428
chr2	150068133	150068213	LINE	L1Md_F3	L1	chr2L1Md_F3150067916	NonProperStrand	2	chr3	23849333	23849423	LINE	L1Md_F3	L1	chr3L1Md_F323848809	NonProperStrand	1	1	-inf
chr1	174220823	174220847	protein_coding	Atp1a2	exon	ENSMUSG00000007097	ProperStrand	12	chr4	131908689	131908807	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-9.9787
chr11	5501487	5501506	protein_coding	Ankrd36	intron	ENSMUSG00000020481	NonProperStrand	1	chr3	97817679	97851652	protein_coding	Notch2	exon	ENSMUSG00000027878	ProperStrand	86	1	-inf
chr11	120693630	120693648	protein_coding	Ccdc57	intron	ENSMUSG00000048445	ProperStrand	12	chr18	35714144	35714213	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-6.5851
chrX	132193650	132193666	protein_coding	1700008I05Rik	exon	ENSMUSG00000058252	ProperStrand	4	chr15	79908932	79908987	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-11.1005
chr5	32438961	32438979	protein_coding	Fosl2	utr5	ENSMUSG00000029135	ProperStrand	5	chr4	131865861	131865951	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-6.5022
chr3	14603674	14603690	protein_coding	E2f5	exon	ENSMUSG00000027552	ProperStrand	10	chr1	89673675	89673775	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-6.7666
chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr4	56910496	56910618	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	2	-2.4060
chr1	191667861	191667886	protein_coding	Ptpn14	intron	ENSMUSG00000026604	ProperStrand	74	chr16	23110455	23110553	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-5.7602
chr17	56560741	56561555	protein_coding	Ptprs	exon	ENSMUSG00000013236	ProperStrand	152	chr9	64022873	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-6.1826
chr5	108336363	108336497	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	chr7	116664794	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	47	-5.1611
chr1	127291712	127293754	protein_coding	Actr3	exon	ENSMUSG00000026341	ProperStrand	45	chr10	23505149	23505204	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-4.7670
chr9	15130707	15130744	snoRNA	ENSMUSG00000077506_Scarna9	.	ENSMUSG00000077506	ProperStrand	148	chr17	24857740	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-0.9641
chr19	46836213	46836229	protein_coding	Cnnm2	utr5	ENSMUSG00000064105	NonProperStrand	19	chr12	55835615	55835705	snRNA	ENSMUSG00000075960_U1	.	ENSMUSG00000075960	ProperStrand	210	1	-13.1360
chr6	28824972	28830209	protein_coding	Snd1	exon	ENSMUSG00000001424	ProperStrand	210	chr5	114027226	114027306	protein_coding	Wscd2	exon	ENSMUSG00000063430	ProperStrand	8	1	-14.9346
chr2	34681581	34681599	protein_coding	Fbxw2	utr5	ENSMUSG00000035949	NonProperStrand	6	chr16	23110827	23110851	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.7876
chr4	43505657	43505719	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr19	43739081	43740309	protein_coding	Slc25a28	exon	ENSMUSG00000040414	ProperStrand	8	1	-7.0216
chr2	29756734	29757757	protein_coding	Odf2	exon	ENSMUSG00000026790	ProperStrand	58	chr2	91436230	91436310	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-7.5650
chr17	33787219	33787262	protein_coding	Hnrnpm	exon	ENSMUSG00000059208	ProperStrand	56	chr7	52382755	52382832	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-6.8889
chr4	41150098	41150128	snoRNA	ENSMUSG00000089265_SNORD121A	.	ENSMUSG00000089265	ProperStrand	370	chr17	35088971	35089022	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	3	-6.5111
chr3	153574605	153574655	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	chr10	23505177	23505267	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	6	-0.7134
chr16	91663091	91663146	protein_coding	Son	utr3	ENSMUSG00000022961	ProperStrand	59	chr4	131865494	131865516	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	4	-13.1018
chr3	99003137	99003161	protein_coding	Wars2	intron	ENSMUSG00000004233	NonProperStrand	48	chr11	6428035	6428091	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-6.1217
chr15	82971462	82971479	protein_coding	Poldip3	intron	ENSMUSG00000041815	ProperStrand	57	chr7	123320422	123323917	protein_coding	Plekha7	utr5	ENSMUSG00000045659	ProperStrand	66	1	-13.2240
chr10	110470585	110470675	LTR	ORR1D1-int	MaLR	chr10ORR1D1-int110470573	NonProperStrand	1	chr10	110470477	110470567	LTR	ORR1D1	MaLR	chr10ORR1D1110470299	NonProperStrand	1	1	-inf
chr2	152239909	152239995	protein_coding	Zcchc3	exon	ENSMUSG00000074682	ProperStrand	11	chr15	34370546	34370624	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-6.8789
chr14	106223320	106223337	LINE	L2	L2	chr14L2106223252	NonProperStrand	1	chr19	7044286	7044304	Low_complexity	GC_rich	Low_complexity	chr19GC_rich7044286	ProperStrand	1	1	-inf
chr6	41020952	41021032	SINE	RSINE1	B4	chr6RSINE141020895	NonProperStrand	1	chr6	40279800	40279890	protein_coding	Agk	intron	ENSMUSG00000029916	ProperStrand	6	1	-inf
chr9	44216868	44216899	protein_coding	Rps25	exon	ENSMUSG00000009927	ProperStrand	42	chr8	112363228	112363275	snoRNA	ENSMUSG00000077549_Snord71	.	ENSMUSG00000077549	ProperStrand	196	1	-11.6583
chr2	131018415	131018860	protein_coding	Cdc25b	exon	ENSMUSG00000027330	ProperStrand	20	chr5	108336384	108336474	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	7	-21.9295
chrX	133268688	133268788	protein_coding	Morf4l2	exon	ENSMUSG00000031422	ProperStrand	113	chr17	24857803	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	5	-7.4756
chr6	85388876	85389659	protein_coding	Smyd5	exon	ENSMUSG00000033706	ProperStrand	107	chr12	104014414	104014472	protein_coding	Ubr7	utr3	ENSMUSG00000041712	ProperStrand	46	1	-12.6887
chr7	29171540	29171558	protein_coding	Med29	utr3	ENSMUSG00000003444	NonProperStrand	134	chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	1	-7.6046
chr4	43505733	43505823	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr11	75314291	75314333	protein_coding	Prpf8	utr3	ENSMUSG00000020850	ProperStrand	255	1	-0.8489
chr6	28376401	28376426	protein_coding	Arf5	utr3	ENSMUSG00000020440	ProperStrand	19	chr18	35716685	35716775	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-10.4198
chr19	26785149	26785165	protein_coding	Smarca2	exon	ENSMUSG00000024921	ProperStrand	38	chr4	121870880	122132511	pseudogene	Gm12896	.	ENSMUSG00000083558	NonProperStrand	19	1	-16.6149
chr8	87230667	87230683	protein_coding	Nfix	utr3	ENSMUSG00000001911	ProperStrand	12	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-10.5024
chr5	114027273	114027289	protein_coding	Wscd2	exon	ENSMUSG00000063430	ProperStrand	8	chr10	23506275	23506347	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	2	-17.4460
chr7	129364056	129364181	protein_coding	2010110P09Rik	exon	ENSMUSG00000030865	NonProperStrand	26	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.1929
chr4	43505683	43505783	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr8	127394715	127394741	protein_coding	Gnpat	exon	ENSMUSG00000031985	ProperStrand	20	1	-5.1523
chr6	128384184	128384204	protein_coding	Fkbp4	intron	ENSMUSG00000030357	NonProperStrand	42	chr1	162965535	162965551	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.9369
chr2	158203982	158204032	snoRNA	ENSMUSG00000065840_SNORA71	.	ENSMUSG00000065840	ProperStrand	107	chr4	132394330	132394430	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	1	-7.9811
chr16	13813231	13813321	protein_coding	Rrn3	exon	ENSMUSG00000022682	ProperStrand	58	chr7	150717344	150717424	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-5.5731
chr13	100831030	100831075	protein_coding	Bdp1	exon	ENSMUSG00000049658	ProperStrand	159	chr1	162965535	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.6373
chr11	6519810	6519941	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	chr5	108336389	108336497	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	9	-10.4319
chr2	102187125	102197594	protein_coding	Trim44	exon	ENSMUSG00000027189	ProperStrand	26	chr2	26493366	26493485	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-5.3491
chr5	100855944	100855975	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr11	6519810	6519931	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	6	-11.0453
chr18	35097312	35111017	protein_coding	Hspa9	exon	ENSMUSG00000024359	ProperStrand	166	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	9	-1.9174
chr11	68902940	68903030	protein_coding-noncoding	Vamp2	utr5	ENSMUSG00000020894	ProperStrand	1	chr11	68903259	68903349	protein_coding	Vamp2	exon	ENSMUSG00000020894	ProperStrand	8	1	-inf
chr15	91285486	91285503	protein_coding	Slc2a13	intron	ENSMUSG00000036298	NonProperStrand	3	chr15	79908957	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-11.7928
chr5	115939554	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr12	92811866	92811938	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	4	-11.0503
chr2	150451548	150451963	protein_coding	Acss1	exon	ENSMUSG00000027452	ProperStrand	13	chr3	82816757	82816774	protein_coding	Fgg	exon	ENSMUSG00000033860	NonProperStrand	321	5	-19.6468
chr18	74938044	74938135	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	ProperStrand	1022	chr1	89681188	89681317	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	7	-8.0722
chr7	26472435	26472451	protein_coding	Tgfb1	utr5	ENSMUSG00000002603	NonProperStrand	154	chr1	162965980	162966006	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-1.9646
chr13	9833563	9833669	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr7	106627938	106627958	protein_coding	Rps3	exon	ENSMUSG00000030744	ProperStrand	159	1	-3.1294
chr11	69804977	69804994	protein_coding	Gabarap	utr5	ENSMUSG00000018567	ProperStrand	24	chr14	33005090	33005135	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-5.7700
chr18	37463370	37463387	protein_coding	Pcdhb3	utr3	ENSMUSG00000045498	ProperStrand	1	chr10	23505150	23505237	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	NonProperStrand	45	1	-inf
chr7	121375755	121375803	protein_coding	Copb1	exon	ENSMUSG00000030754	ProperStrand	25	chr9	20919828	20919906	protein_coding	Tyk2	exon	ENSMUSG00000032175	ProperStrand	29	3	-inf
chr6	38577350	38577366	protein_coding	Klrg2	utr3	ENSMUSG00000071537	NonProperStrand	37	chr18	35714216	35714262	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-7.2759
chr4	43505651	43505847	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr7	117189863	117189945	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	13	-1.1085
chr1	121443567	121443657	protein_coding	Epb4.1l5	utr3	ENSMUSG00000026383	ProperStrand	22	chr4	131908814	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-10.1618
chr10	119665182	119668271	protein_coding	Llph	exon	ENSMUSG00000020224	ProperStrand	9	chr11	69483199	69483279	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-6.0733
chr7	147130765	147130820	protein_coding	Utf1	exon	ENSMUSG00000047751	ProperStrand	67	chr8	129468746	129468825	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-4.2039
chr6	92193744	92193831	protein_coding	Trh	exon	ENSMUSG00000005892	ProperStrand	87	chr3	20238638	20238656	protein_coding	Agtr1b	intron	ENSMUSG00000054988	NonProperStrand	39	1	-13.4334
chr8	3598715	3599030	protein_coding	Camsap3	exon	ENSMUSG00000044433	ProperStrand	86	chr4	131908236	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-1.8791
chr14	55539357	55539390	protein_coding	Efs	exon	ENSMUSG00000022203	ProperStrand	7	chr18	35716804	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-6.2708
chr2	22969777	22969827	protein_coding	Acbd5	utr3	ENSMUSG00000026781	ProperStrand	3	chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	1	-15.6616
chr6	122282557	122282649	protein_coding	Phc1	exon	ENSMUSG00000040669	ProperStrand	158	chrX	113862551	113862569	snoRNA	ENSMUSG00000088518_SNORA9	.	ENSMUSG00000088518	ProperStrand	280	4	-21.2257
chr4	43505820	43505910	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr11	52093449	52093540	protein_coding	Tcf7	intron	ENSMUSG00000000782	ProperStrand	24	1	-4.7940
chr19	46474487	46474504	protein_coding	Sufu	intron	ENSMUSG00000025231	NonProperStrand	10	chr19	17403237	17403337	protein_coding	Gcnt1	utr3	ENSMUSG00000038843	ProperStrand	11	1	-19.8944
chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	chr1	138178661	138178677	protein_coding	Camsap2	exon	ENSMUSG00000041570	NonProperStrand	116	1	-9.2966
chr9	44656668	44656685	protein_coding	Mll1	exon	ENSMUSG00000002028	NonProperStrand	26	chr7	28421172	28421284	protein_coding	Akt2	exon	ENSMUSG00000004056	ProperStrand	100	1	-13.9841
chrX	96259794	96260946	protein_coding	Stard8	exon	ENSMUSG00000031216	ProperStrand	142	chr11	62418014	62418091	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	7	-20.4378
chr15	76010437	76010453	protein_coding	Plec	exon	ENSMUSG00000022565	ProperStrand	186	chr11	106362638	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-5.1797
chr7	80870689	80870779	DNA	URR1B	MER1_type	chr7URR1B80870605	NonProperStrand	1	chr7	80870344	80870424	LINE	Lx7	L1	chr7Lx780869575	ProperStrand	1	1	-inf
chr10	19989306	19993087	protein_coding	Mtap7	exon	ENSMUSG00000019996	ProperStrand	43	chr7	118219647	118219727	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	4	-15.1570
chr16	3856858	3856877	protein_coding	Zfp174	utr3	ENSMUSG00000054939	NonProperStrand	166	chr18	35716830	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-1.5310
chr1	178754159	178754175	protein_coding	Sdccag8	intron	ENSMUSG00000026504	ProperStrand	54	chr9	103267904	103267962	protein_coding	Cdv3	utr5	ENSMUSG00000032803	ProperStrand	68	1	-13.2743
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr8	3803253	3803343	misc_RNA	RNaseP_nuc	.	ENSMUSG00000088025	ProperStrand	328	4	-14.1225
chr11	115852975	115852991	protein_coding	Itgb4	exon	ENSMUSG00000020758	ProperStrand	8	chr18	73693117	73693137	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-9.6171
chr4	147526063	147526080	protein_coding	Fbxo6	utr5	ENSMUSG00000055401	NonProperStrand	2	chr17	24857787	24857828	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-9.4368
chr4	155323716	155323806	protein_coding	Ube2j2	intron	ENSMUSG00000023286	ProperStrand	35	chr1	89673629	89673709	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-4.2696
chrX	147501272	147501361	protein_coding	Fgd1	utr5	ENSMUSG00000025265	ProperStrand	96	chr19	8798743	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-3.9080
chr8	72591888	72591935	protein_coding	Sugp1	intron	ENSMUSG00000011306	ProperStrand	20	chr10	110918659	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-9.1457
chr2	30952617	30952644	protein_coding	Fnbp1	utr5	ENSMUSG00000075415	ProperStrand	53	chr1	88247740	88247804	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-5.3383
chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr5	36056721	36056821	protein_coding	Sh3tc1	exon	ENSMUSG00000036553	ProperStrand	16	1	-9.1173
chr2	144087414	144087463	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	chr11	51551334	51551424	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	7	-12.1699
chr4	147992226	147992249	protein_coding	Tardbp	utr3	ENSMUSG00000041459	ProperStrand	120	chr16	23111456	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-1.0432
chr1	173275464	173275554	protein_coding	Nit1	utr5	ENSMUSG00000013997	ProperStrand	4	chr10	23505190	23505270	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-6.2798
chr15	55088552	55088568	protein_coding	Deptor	utr3	ENSMUSG00000022419	ProperStrand	17	chr5	144917793	144917828	protein_coding	Lmtk2	exon	ENSMUSG00000038970	ProperStrand	60	1	-15.8986
chr5	108742071	108742087	protein_coding	Pigg	exon	ENSMUSG00000029263	NonProperStrand	1	chr5	121655567	121655583	protein_coding	Rpl6	exon	ENSMUSG00000029614	ProperStrand	332	1	-inf
chr5	114017698	114017798	protein_coding	Wscd2	intron	ENSMUSG00000063430	ProperStrand	8	chr7	29136612	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-6.2203
chr5	151755616	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr2	130103751	130103808	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-3.0854
chr6	134218293	134218326	protein_coding	Etv6	utr3	ENSMUSG00000030199	ProperStrand	46	chr14	33005093	33005139	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	2	-7.4933
chr10	23505152	23505204	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	chr3	121995898	121995931	tRNA	tRNA628-ArgTCT	.	901834	ProperStrand	7	1	-5.0629
chr11	35965741	35965761	protein_coding	Odz2	intron	ENSMUSG00000049336	NonProperStrand	43	chr4	131865380	131865445	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-4.6368
chr2	93047999	93048017	protein_coding	Tspan18	intron	ENSMUSG00000027217	ProperStrand	4	chr4	131908356	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-6.5415
chr3	88153950	88153970	protein_coding	Smg5	exon	ENSMUSG00000001415	ProperStrand	70	chr6	71832605	71832688	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	2	-8.7134
chr14	31997949	31998039	protein_coding	Nisch	intron	ENSMUSG00000021910	ProperStrand	125	chr19	8963096	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.1631
chr4	131865856	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr15	98356776	98356913	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	18	-3.3008
chr2	119411185	119411265	protein_coding	1500003O03Rik	utr3	ENSMUSG00000014077	ProperStrand	22	chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	1	-11.4757
chr8	86464939	86465014	protein_coding	Lphn1	utr3	ENSMUSG00000013033	ProperStrand	221	chr17	35089182	35089237	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-3.0315
chr10	62273042	62273085	protein_coding	Tet1	utr3	ENSMUSG00000047146	ProperStrand	286	chr11	69483197	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	4	-2.4454
chr7	109830472	109830488	protein_coding	Trim68	intron	ENSMUSG00000073968	ProperStrand	23	chr10	23506278	23506336	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-8.8744
chr19	8963087	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	chr5	125885975	125886055	tRNA	tRNA1316-AspGTC	.	1285878	ProperStrand	8	1	-6.1145
chr7	29171540	29171558	protein_coding	Med29	utr3	ENSMUSG00000003444	NonProperStrand	134	chr2	158182201	158182291	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-3.4845
chr19	6375713	6375785	protein_coding	Sf1	exon	ENSMUSG00000024949	ProperStrand	251	chr19	11271200	11271217	protein_coding	Ms4a13	utr5	ENSMUSG00000057240	ProperStrand	59	1	-10.4778
chr5	119212751	119213484	protein_coding	Med13l	utr3	ENSMUSG00000018076	ProperStrand	226	chr11	116535941	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	10	-19.9108
chr2	127282531	127282633	protein_coding	Kcnip3	utr3	ENSMUSG00000079056	ProperStrand	14	chr7	117166775	117166833	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-7.7158
chr14	70105317	70105417	protein_coding	R3hcc1	exon	ENSMUSG00000034194	ProperStrand	12	chr5	130295484	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-8.4807
chr1	88253647	88253683	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chr11	51551334	51551424	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	3	-5.6732
chr2	179912206	179912275	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr7	29747217	29747262	protein_coding	Actn4	utr5	ENSMUSG00000054808	ProperStrand	120	9	-inf
chr7	13435392	13435435	protein_coding	Zfp110	utr3	ENSMUSG00000058638	ProperStrand	6	chr7	116663640	116663758	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-7.0045
chr9	78023109	78023150	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr15	76370221	76370321	protein_coding	Slc52a2	exon	ENSMUSG00000022560	ProperStrand	16	1	-8.5314
chr5	115939521	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr15	34370545	34370637	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	8	-3.8385
chr17	28190875	28190891	protein_coding	Anks1	exon	ENSMUSG00000024219	NonProperStrand	16	chr11	6428108	6428165	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-9.4247
chr3	104603930	104603957	protein_coding	Mov10	exon	ENSMUSG00000002227	ProperStrand	96	chr4	118105614	118105669	protein_coding	Cdc20	exon	ENSMUSG00000006398	ProperStrand	43	1	-13.0441
chr10	23505150	23505240	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	chr15	57978169	57978249	snoRNA	ENSMUSG00000080461_SNORA11	.	ENSMUSG00000080461	ProperStrand	171	7	-4.3905
chr15	73416674	73448636	protein_coding	Slc45a4	intron	ENSMUSG00000079020	ProperStrand	127	chrX	34622906	34623023	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	3	-5.2624
chr2	155460855	155461037	protein_coding	Trpc4ap	exon	ENSMUSG00000038324	ProperStrand	38	chr4	131908689	131908752	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.9012
chr16	23111482	23111506	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr8	32260339	32260422	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-1.0190
chr11	68936358	68936374	protein_coding	Hes7	exon	ENSMUSG00000023781	NonProperStrand	66	chr8	73419657	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.9596
chr12	105709750	105709766	protein_coding	Gsc	exon	ENSMUSG00000021095	NonProperStrand	12	chr16	23111690	23111759	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.8390
chr1	102076756	102076791	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	chr5	111121110	111121200	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-2.7731
chr2	166661704	166661784	protein_coding	Arfgef2	exon	ENSMUSG00000074582	ProperStrand	32	chr19	8963080	8963170	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.3834
chr4	107440276	107440293	lincRNA	Gm12907	intron	ENSMUSG00000087195	NonProperStrand	18	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-11.3672
chr8	123082868	123082958	protein_coding	Gse1	intron	ENSMUSG00000031822	ProperStrand	97	chr11	69481351	69481431	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-2.3600
chr11	119213484	119213501	protein_coding	Sgsh	intron	ENSMUSG00000005043	NonProperStrand	15	chr19	3935288	3935305	protein_coding	Unc93b1	exon	ENSMUSG00000036908	ProperStrand	5	1	-20.3414
chr9	77808852	77823627	protein_coding	Elovl5	exon	ENSMUSG00000032349	ProperStrand	32	chr14	64438056	64438075	protein_coding	Xkr6	exon	ENSMUSG00000035067	ProperStrand	10	1	-18.0596
chr14	22441212	22441245	protein_coding	Myst4	exon	ENSMUSG00000021767	ProperStrand	151	chr5	130300510	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-2.1424
chr2	90235291	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	7	-5.8963
chr15	79913288	79913346	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr3	96528293	96528311	snoRNA	ENSMUSG00000065669_SNORA5	.	ENSMUSG00000065669	ProperStrand	180	1	-1.7118
chr9	40610209	40611106	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr5	5782941	5783443	pseudogene	Gm15459	.	ENSMUSG00000083840	ProperStrand	22	17	-21.3402
chr4	43505781	43505861	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr4	149012413	149012503	protein_coding	Clstn1	exon	ENSMUSG00000039953	ProperStrand	173	2	-2.5567
chr3	142351261	142351279	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr17	46861595	46861611	protein_coding	Pex6	exon	ENSMUSG00000002763	ProperStrand	292	1	-4.6916
chr18	35714247	35714307	lincRNA	Snhg4	intron	ENSMUSG00000090430	ProperStrand	270	chr10	39978349	39978449	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-2.6572
chr6	33751931	33751948	protein_coding	Exoc4	intron	ENSMUSG00000029763	NonProperStrand	10	chr9	65044377	65044472	snRNA	ENSMUSG00000075763_U5	.	ENSMUSG00000075763	ProperStrand	216	1	-14.4124
chr5	31356419	31356676	protein_coding	0610007C21Rik	exon	ENSMUSG00000013622	ProperStrand	1	chr9	15119631	15119712	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-inf
chr6	70840199	70842392	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	ProperStrand	13	chr4	135607132	135607177	protein_coding	Rpl11	exon	ENSMUSG00000059291	ProperStrand	152	2	-inf
chr13	53024970	53024987	protein_coding	Auh	exon	ENSMUSG00000021460	ProperStrand	10	chr1	173934949	173936224	protein_coding	Vangl2	exon	ENSMUSG00000026556	ProperStrand	37	1	-17.7383
chr10	126732803	126732824	protein_coding	Ddit3	exon	ENSMUSG00000025408	ProperStrand	1	chr16	23110894	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr11	50193856	50193899	protein_coding-noncoding	Hnrnph1	utr5	ENSMUSG00000007850	ProperStrand	13	chr15	82980089	82980144	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	3	-inf
chr5	143666930	143667020	protein_coding	Actb	exon	ENSMUSG00000029580	ProperStrand	446	chr5	111121067	111121147	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-2.6523
chr7	117189863	117189933	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr14	76372336	76372426	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	1	-2.2002
chr15	101914777	101925732	protein_coding	Eif4b	exon	ENSMUSG00000058655	ProperStrand	484	chr16	23111770	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	7	-1.6604
chr10	121013361	121013381	protein_coding	Tbk1	exon	ENSMUSG00000020115	ProperStrand	14	chr1	162965562	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-6.0900
chr9	113765872	113765907	protein_coding	Clasp2	intron	ENSMUSG00000033392	ProperStrand	30	chr12	60141322	60141412	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-8.2169
chr13	3589508	3589525	protein_coding	BC016423	exon	ENSMUSG00000033799	NonProperStrand	4	chr4	131865380	131865457	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	2	-15.6581
chr1	88423515	88425754	protein_coding	Ptma	exon	ENSMUSG00000026238	ProperStrand	385	chr5	124821007	124821107	protein_coding	Sbno1	utr3	ENSMUSG00000038095	ProperStrand	134	2	-12.7353
chr2	105012751	105012769	protein_coding	Wt1	utr3	ENSMUSG00000016458	NonProperStrand	338	chr6	115757992	115758051	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-2.2874
chr17	45706427	45706453	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr5	108336412	108336490	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	7	-3.6113
chr4	129662259	129662276	protein_coding	Bai2	utr5	ENSMUSG00000028782	ProperStrand	119	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-4.5403
chr1	123462604	123462711	protein_coding	Ddx18	exon	ENSMUSG00000001674	ProperStrand	41	chr16	23111698	23111749	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	14	-inf
chr11	76435679	76435733	protein_coding	Abr	utr5	ENSMUSG00000017631	ProperStrand	33	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	2	-16.6238
chr4	65276669	65276710	protein_coding	Trim32	utr3	ENSMUSG00000051675	ProperStrand	42	chr16	23110891	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.3954
chr7	4745144	4745206	protein_coding	Rpl28	exon	ENSMUSG00000030432	ProperStrand	220	chr17	28215419	28215436	protein_coding	Tcp11	intron	ENSMUSG00000062859	NonProperStrand	11	1	-14.1718
chr6	29119929	29119945	protein_coding	Prrt4	exon	ENSMUSG00000079654	NonProperStrand	18	chr16	23110828	23110890	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7867
chr10	23505190	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	chr8	97227953	97227989	tRNA	tRNA1008-LeuCAG	.	146035	ProperStrand	18	8	-inf
chr11	76251939	76251979	protein_coding	Abr	intron	ENSMUSG00000017631	ProperStrand	33	chr10	110918599	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-7.6249
chrX	147418356	147418406	protein_coding	Gnl3l	utr3	ENSMUSG00000025266	ProperStrand	52	chr6	57712505	57712521	protein_coding	Vopp1	exon	ENSMUSG00000037788	NonProperStrand	21	1	-15.7115
chr1	174035338	174035355	protein_coding	Copa	exon	ENSMUSG00000026553	ProperStrand	33	chr4	85016349	85016365	protein_coding	Sh3gl2	intron	ENSMUSG00000028488	NonProperStrand	313	1	-11.2097
chr4	150450035	150450125	protein_coding	Camta1	intron	ENSMUSG00000014592	ProperStrand	170	chr11	6428089	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.4698
chr17	14006474	14006574	protein_coding	Mllt4	intron	ENSMUSG00000068036	ProperStrand	156	chr16	23110553	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.0205
chr1	192768858	192768983	protein_coding	Angel2	utr3	ENSMUSG00000026634	ProperStrand	23	chr5	116010829	116010851	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	10	-20.8238
chr11	101466261	101466351	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	chr8	129468767	129468847	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-0.7986
chr17	32881394	32881484	LINE	Lx8	L1	chr17Lx832881361	ProperStrand	1	chr6	56867433	56867513	protein_coding	Nt5c3	intron	ENSMUSG00000029780	NonProperStrand	1	1	-inf
chr9	95525014	95525035	antisense	Gm16126	.	ENSMUSG00000086585	NonProperStrand	229	chr3	27138545	27140147	protein_coding	Nceh1	exon	ENSMUSG00000027698	ProperStrand	13	5	-20.0765
chr9	35022493	35022557	protein_coding	Srpr	exon	ENSMUSG00000032042	ProperStrand	54	chr11	69483772	69484163	protein_coding	Eif4a1	exon	ENSMUSG00000059796	ProperStrand	108	1	-12.3452
chr13	99018400	99018465	protein_coding	Utp15	utr3	ENSMUSG00000041747	ProperStrand	19	chr11	97642987	97643086	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	10	-inf
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr5	124081004	124081094	protein_coding	Clip1	exon	ENSMUSG00000049550	ProperStrand	27	4	-20.2163
chr14	67670799	67670815	protein_coding	Ppp2r2a	intron	ENSMUSG00000022052	NonProperStrand	5	chr4	43505764	43505864	protein_coding	Ccdc107	intron	ENSMUSG00000028461	ProperStrand	69	2	-19.2100
chr1	136364360	136364425	protein_coding	Klhl12	exon	ENSMUSG00000026455	ProperStrand	6	chr7	116664819	116664909	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-7.0474
chr5	30111655	30111745	protein_coding	Dnajb6	utr3	ENSMUSG00000029131	ProperStrand	81	chrX	71517863	71517943	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-5.9537
chr1	33828651	33828669	protein_coding	Zfp451	intron	ENSMUSG00000042197	NonProperStrand	393	chr11	106362336	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	2	-4.1633
chr16	23111373	23111482	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	chr16	56035865	56035955	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	13	-2.4050
chr7	144645679	144645778	protein_coding	Glrx3	intron	ENSMUSG00000031068	ProperStrand	35	chr2	91419685	91419730	protein_coding	Ckap5	intron	ENSMUSG00000040549	ProperStrand	53	7	-20.8736
chr1	183747134	183747480	protein_coding	Lbr	exon	ENSMUSG00000004880	ProperStrand	97	chr17	24857785	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.5374
chr11	57930986	57931047	protein_coding	Cnot8	exon	ENSMUSG00000020515	ProperStrand	12	chr14	76247805	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-7.3616
chr8	124552133	124552149	protein_coding	Banp	utr3	ENSMUSG00000025316	NonProperStrand	34	chr10	23505162	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-3.7873
chr1	182066093	182066183	protein_coding	Cdc42bpa	intron	ENSMUSG00000026490	ProperStrand	24	chr11	69481353	69481433	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-4.9335
chr2	41199972	41199989	protein_coding	Lrp1b	exon	ENSMUSG00000049252	ProperStrand	376	chr11	51551350	51551424	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	1	-4.1213
chr11	103540416	103540516	protein_coding	Gosr2	utr3	ENSMUSG00000020946	ProperStrand	8	chrX	34622943	34623010	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	5	-20.7635
chr1	5593729	5593746	protein_coding	Oprk1	utr3	ENSMUSG00000025905	ProperStrand	6	chr8	13416895	13416911	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-11.1899
chr9	44218071	44218264	protein_coding	Rps25	utr3	ENSMUSG00000009927	ProperStrand	42	chr4	131908749	131908784	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.7439
chr11	119136228	119136244	protein_coding	Gaa	exon	ENSMUSG00000025579	NonProperStrand	201	chr7	5959876	5959892	protein_coding	Vmn1r65	exon	ENSMUSG00000066850	ProperStrand	1	1	-inf
chr2	179322378	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr5	116071701	116071718	protein_coding	Gcn1l1	exon	ENSMUSG00000041638	ProperStrand	408	1	-7.3839
chr5	141109572	141110753	protein_coding	Ttyh3	exon	ENSMUSG00000036565	ProperStrand	22	chr1	63225588	63225654	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-8.6827
chr9	83744114	83744204	protein_coding	Ttk	intron	ENSMUSG00000038379	ProperStrand	36	chr4	131908361	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	10	-inf
chr1	146562425	146562441	LTR	BGLII	ERVK	chr1BGLII146562400	ProperStrand	4	chr4	131865855	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.0048
chr14	67422971	67423071	protein_coding	Dpysl2	utr3	ENSMUSG00000022048	ProperStrand	36	chr8	129468746	129468797	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-5.4030
chr7	134177490	134177538	protein_coding	Kif22	exon	ENSMUSG00000030677	ProperStrand	63	chr14	118883461	118883566	protein_coding	Abcc4	utr3	ENSMUSG00000032849	ProperStrand	137	1	-11.5579
chr11	42440243	42440259	protein_coding	Gabrb2	exon	ENSMUSG00000007653	ProperStrand	248	chr16	23110455	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-1.1225
chr8	50153835	50153852	LTR	MLT1A1	MaLR	chr8MLT1A150153775	NonProperStrand	1	chr18	35716706	35716796	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-inf
chr14	51427137	51427159	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr11	43543727	43543806	protein_coding	Ttc1	utr3	ENSMUSG00000041278	ProperStrand	13	3	-22.4933
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr3	105265054	105265072	protein_coding	Kcnd3	intron	ENSMUSG00000040896	NonProperStrand	44	1	-9.2161
mmu-miR-1949	6	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr4	139007666	139007715	protein_coding	Ubr4	exon	ENSMUSG00000066036	ProperStrand	304	1	-4.9558
chr1	74341897	74341942	protein_coding	Tmbim1	exon	ENSMUSG00000006301	ProperStrand	13	chrX	6951555	6951571	protein_coding	Usp27x	exon	ENSMUSG00000046269	NonProperStrand	36	2	-19.7323
chr7	31743145	31743245	protein_coding	Lsr	exon	ENSMUSG00000001247	ProperStrand	8	chr15	34370626	34370680	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-7.5453
chr8	108734812	108734828	protein_coding	Slc7a6os	utr5	ENSMUSG00000033106	NonProperStrand	29	chr1	88247814	88247835	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-6.5297
chr2	125983022	125983042	protein_coding	Dtwd1	intron	ENSMUSG00000023330	NonProperStrand	1	chr14	63287578	63287609	snoRNA	ENSMUSG00000089531_SNORA73	.	ENSMUSG00000089531	ProperStrand	123	1	-inf
chr2	5819664	5819735	protein_coding	Dhtkd1	utr3	ENSMUSG00000025815	ProperStrand	46	chr2	26286682	26288855	protein_coding	Sec16a	exon	ENSMUSG00000026924	ProperStrand	86	1	-13.1288
chr6	89292436	89292606	protein_coding	Plxna1	exon	ENSMUSG00000030084	ProperStrand	233	chr6	117821501	117821517	protein_coding	Zfp239	exon	ENSMUSG00000042097	ProperStrand	6	1	-15.3413
chr2	31705511	31705591	LINE	L1Md_F2	L1	chr2L1Md_F231705029	NonProperStrand	1	chr14	34781291	34781381	protein_coding	Zfp488	utr3	ENSMUSG00000044519	ProperStrand	54	1	-inf
chr11	53213877	53213938	protein_coding	Aff4	exon	ENSMUSG00000049470	ProperStrand	94	chr7	4704247	4704269	protein_coding	Cox6b2	intron	ENSMUSG00000051811	ProperStrand	4	1	-17.9446
chr9	78023109	78023151	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr4	131908356	131908463	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	1	-0.7408
chr5	135096086	135096176	protein_coding	Eif4h	utr3	ENSMUSG00000040731	ProperStrand	46	chr3	123210890	123210970	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.5110
chr3	151751458	151751476	SINE	RSINE1	B4	chr3RSINE1151751222	ProperStrand	11	chr19	46836213	46836229	protein_coding	Cnnm2	utr5	ENSMUSG00000064105	NonProperStrand	19	1	-18.7445
chr19	7095656	7096157	protein_coding	Stip1	exon	ENSMUSG00000024966	ProperStrand	100	chr7	28960987	28962183	protein_coding	Fbl	exon	ENSMUSG00000046865	ProperStrand	52	4	-20.5443
chr11	115384878	115384951	protein_coding	Sumo2	utr3	ENSMUSG00000020738	ProperStrand	24	chr11	69483237	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	4	-13.5198
chr9	15119967	15120039	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	chr19	8963027	8963178	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	14	-1.7898
chr16	92843495	92843585	LTR	ORR1C1	MaLR	chr16ORR1C192843463	NonProperStrand	1	chr9	52990660	52990740	protein_coding	Ddx10	intron	ENSMUSG00000053289	NonProperStrand	5	1	-inf
chr9	79915104	79991661	protein_coding	Senp6	exon	ENSMUSG00000034252	ProperStrand	110	chr11	68887041	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	2	-5.2221
chr1	133141546	133141562	protein_coding	Rassf5	exon	ENSMUSG00000026430	ProperStrand	73	chr4	131908704	131908751	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.9692
chr8	12757014	12757104	protein_coding	Atp11a	utr5	ENSMUSG00000031441	ProperStrand	635	chr2	26768049	26768120	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	3	-9.2758
chr12	3968611	3968627	protein_coding	Efr3b	exon	ENSMUSG00000020658	ProperStrand	142	chr8	72287172	72287188	protein_coding	Zfp866	utr3	ENSMUSG00000043090	NonProperStrand	134	1	-9.9716
chr6	119150821	119150839	protein_coding-noncoding	Dcp1b	utr5	ENSMUSG00000041477	ProperStrand	1	chr10	110918547	110918657	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-inf
chr10	9488734	9488762	protein_coding	Stxbp5	exon	ENSMUSG00000019790	ProperStrand	2	chr7	116663656	116663746	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-9.6916
chr9	15120981	15121071	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	chr6	115758048	115758128	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-2.1697
chr10	79781933	79781949	protein_coding	2310011J03Rik	utr3	ENSMUSG00000020133	NonProperStrand	5	chr16	23110828	23110915	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr6	13577054	13577070	protein_coding	B630005N14Rik	utr3	ENSMUSG00000042742	ProperStrand	7	chr11	62416602	62416651	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-9.5351
chr10	110918525	110918605	protein_coding	Nap1l1	intron	ENSMUSG00000058799	ProperStrand	185	chr12	88778641	88778731	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	9	-19.8612
chr1	184385988	184388911	protein_coding	Trp53bp2	exon	ENSMUSG00000026510	ProperStrand	19	chr4	131865392	131865472	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-6.2464
chr18	33361212	33361228	protein_coding	Stard4	utr3	ENSMUSG00000024378	ProperStrand	21	chrX	40944841	40944857	protein_coding	Gm362	exon	ENSMUSG00000078320	ProperStrand	129	1	-13.9052
chr7	31895791	31899711	protein_coding	Hpn	utr5	ENSMUSG00000001249	ProperStrand	126	chr18	12295485	12295542	protein_coding	Riok3	exon	ENSMUSG00000024404	ProperStrand	38	1	-12.7458
chr6	85593216	85628010	protein_coding	Alms1	exon	ENSMUSG00000063810	ProperStrand	37	chr7	116664810	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	4	-11.5577
chr1	89270582	89270672	protein_coding	Gigyf2	exon	ENSMUSG00000048000	ProperStrand	128	chr1	88247802	88247835	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	3	-9.0116
chr12	72038891	72038907	protein_coding	Actr10	utr5	ENSMUSG00000021076	ProperStrand	21	chr4	52482703	52482812	protein_coding	Smc2	exon	ENSMUSG00000028312	ProperStrand	50	5	-19.4582
chr17	35822315	35822332	protein_coding	Ddr1	exon	ENSMUSG00000003534	NonProperStrand	5	chr7	116664797	116664887	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-7.4478
chr4	140535013	140535057	protein_coding	Sdhb	utr3	ENSMUSG00000009863	ProperStrand	14	chr11	6428077	6428157	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.9988
chr5	31374986	31375028	protein_coding	Cad	exon	ENSMUSG00000013629	ProperStrand	260	chr17	36097663	36097764	protein_coding	Abcf1	exon	ENSMUSG00000038762	ProperStrand	206	1	-7.9076
chr10	127927981	127928061	protein_coding	Myl6	utr3	ENSMUSG00000090841	NonProperStrand	1	chr12	17552972	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-inf
chr19	10621787	10621887	protein_coding	Cpsf7	utr3	ENSMUSG00000034820	ProperStrand	66	chr8	73419718	73419778	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.9596
chr19	59049689	59064783	protein_coding	4930506M07Rik	exon	ENSMUSG00000041362	ProperStrand	36	chr1	162965997	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-4.5692
chr2	90235312	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	24619305	24619345	protein_coding	Gm10222	exon	ENSMUSG00000067736	ProperStrand	42	1	-5.1514
chr2	160721184	160721200	protein_coding	Lpin3	exon	ENSMUSG00000027412	ProperStrand	31	chr4	131865855	131865920	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.8751
chr5	115939511	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	3	-3.4244
mmu-miR-1949	2	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr1	36856130	36858681	protein_coding	Tmem131	exon	ENSMUSG00000026116	ProperStrand	129	1	-6.6276
chr1	72871341	72895773	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	chr10	110918547	110918672	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-1.2350
chr2	126369571	126369587	lincRNA	Gm16762	exon	ENSMUSG00000085076	NonProperStrand	1	chr9	40612286	40612348	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	1	-inf
chr11	95821434	95821457	protein_coding	Igf2bp1	utr3	ENSMUSG00000013415	ProperStrand	140	chr8	32260335	32260392	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-3.0544
chr11	60519775	60519975	protein_coding	Llgl1	exon	ENSMUSG00000020536	ProperStrand	20	chr6	122273047	122273073	protein_coding	Phc1	exon	ENSMUSG00000040669	ProperStrand	158	1	-13.6007
chr2	171894358	171894375	LINE	Lx8	L1	chr2Lx8171894075	ProperStrand	5	chr11	97642955	97643007	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-12.1765
chr17	36097663	36097764	protein_coding	Abcf1	exon	ENSMUSG00000038762	ProperStrand	206	chr7	117190015	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-1.3075
chr2	130972680	130972938	protein_coding	1700037H04Rik	exon	ENSMUSG00000027327	ProperStrand	18	chr16	23111448	23111486	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-8.3413
chr4	149355573	149355673	protein_coding	H6pd	utr3	ENSMUSG00000028980	ProperStrand	14	chr14	76372292	76372349	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	1	-11.9516
chr11	75305299	75305482	protein_coding	Prpf8	exon	ENSMUSG00000020850	ProperStrand	255	chr4	46508135	46508157	snoRNA	ENSMUSG00000064410_SNORA36	.	ENSMUSG00000064410	ProperStrand	133	7	-20.2695
chr5	122943337	122943417	protein_coding	Atp2a2	intron	ENSMUSG00000029467	ProperStrand	166	chr17	89012744	89012834	protein_coding	Ston1	intron	ENSMUSG00000033855	NonProperStrand	5	1	-16.4421
chr8	91343853	91343870	DNA	Charlie10	MER1_type	chr8Charlie1091343828	ProperStrand	23	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.0081
chr10	80362940	80363004	protein_coding	Timm13	exon	ENSMUSG00000020219	ProperStrand	7	chr16	23111388	23111478	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-5.0992
chr6	118466969	118467059	protein_coding	Ankrd26	intron	ENSMUSG00000007827	ProperStrand	8	chr6	120679606	120679686	protein_coding	Cecr2	intron	ENSMUSG00000071226	NonProperStrand	6	1	-18.5855
chr6	83111671	83111687	protein_coding	1700003E16Rik	exon	ENSMUSG00000030030	ProperStrand	352	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-5.1034
chr1	180251281	180251326	processed_transcript	Gm16586	.	ENSMUSG00000089788	ProperStrand	7	chr6	112689098	112689322	protein_coding	Srgap3	exon	ENSMUSG00000030257	NonProperStrand	208	1	-15.2348
chr10	59757354	59757444	protein_coding	Psap	exon	ENSMUSG00000004207	ProperStrand	124	chr5	115701096	115701165	protein_coding	Rnf10	exon	ENSMUSG00000041740	ProperStrand	95	1	-10.9323
chr9	37464751	37464769	protein_coding	Tbrg1	utr5	ENSMUSG00000011114	ProperStrand	56	chr6	124665276	124665390	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	9	-19.2279
chr5	139047841	139047863	protein_coding	Zfp68	exon	ENSMUSG00000058291	ProperStrand	17	chr4	131865855	131865963	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-9.9145
chr7	52713419	52713505	protein_coding	Ftl1	utr3	ENSMUSG00000050708	ProperStrand	807	chr15	79908927	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-1.0027
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr19	8798513	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-1.2186
chr16	21526566	21527654	protein_coding	Vps8	exon	ENSMUSG00000033653	ProperStrand	27	chr4	131908687	131908720	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.4692
chr7	108026624	108026655	protein_coding	Arhgef17	exon	ENSMUSG00000032875	ProperStrand	33	chr11	69481333	69481433	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-4.3164
chr9	15119631	15119766	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	chr4	116827117	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	21	-7.0661
chr10	80641696	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	chr12	106269337	106269437	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	3	-0.8033
chr4	62918305	62918367	protein_coding	Col27a1	intron	ENSMUSG00000045672	ProperStrand	32	chr4	131865381	131865471	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-5.2110
chr8	9987656	9987684	protein_coding	Abhd13	exon	ENSMUSG00000040396	ProperStrand	7	chr14	76247711	76247752	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-8.4963
chr19	3876935	3876982	protein_coding-noncoding	Chka	utr5	ENSMUSG00000024843	ProperStrand	6	chr9	120039647	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-12.9240
chr16	85797049	85797969	protein_coding	Adamts1	exon	ENSMUSG00000022893	NonProperStrand	10	chr16	23110455	23110563	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	9	-inf
chr11	51414719	51414810	protein_coding	Hnrnpab	utr3	ENSMUSG00000020358	ProperStrand	124	chr18	77203949	77205905	protein_coding	Hdhd2	exon	ENSMUSG00000025421	ProperStrand	5	1	-16.9928
chr4	155366536	155366553	protein_coding	B3galt6	exon	ENSMUSG00000050796	ProperStrand	40	chr10	62383581	62383597	protein_coding	Slc25a16	exon	ENSMUSG00000071253	NonProperStrand	3	1	-21.1665
chr18	73693121	73693186	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr11	77995188	77995255	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	3	-0.8545
chr11	6428076	6428166	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	NonProperStrand	91	chr2	26494713	26494803	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	NonProperStrand	27	1	-14.0924
chr1	193555042	193555064	protein_coding	Lpgat1	intron	ENSMUSG00000026623	ProperStrand	31	chr17	13115702	13115785	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	2	-14.0853
chr15	78939631	78939648	protein_coding	Micall1	utr5	ENSMUSG00000033039	ProperStrand	48	chr14	76247740	76247840	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-4.5978
chr10	68883990	68884080	LINE	L1M2	L1	chr10L1M268883884	NonProperStrand	1	chr10	68883782	68883872	SINE	B2_Mm1t	B2	chr10B2_Mm1t68883706	NonProperStrand	1	1	-inf
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	97642948	97643091	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	58	-4.8462
chr8	46334013	46334106	protein_coding	F11	exon	ENSMUSG00000031645	ProperStrand	21	chr18	35716762	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-13.4149
chr6	85895881	85895897	protein_coding	Dusp11	utr3	ENSMUSG00000030002	ProperStrand	37	chr11	71933601	71933617	protein_coding	Pitpnm3	exon	ENSMUSG00000040543	ProperStrand	3	1	-21.0941
chrX	147749444	147749462	antisense	Gm15139	.	ENSMUSG00000084771	ProperStrand	11	chr11	80415108	80415125	protein_coding	Myo1d	exon	ENSMUSG00000035441	ProperStrand	144	1	-15.0170
chr16	35404112	35407749	protein_coding	Pdia5	exon	ENSMUSG00000022844	ProperStrand	26	chrX	34623013	34623037	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-4.7457
chr2	104841386	104841417	protein_coding	Ccdc73	intron	ENSMUSG00000045106	ProperStrand	13	chr10	80860700	80860717	protein_coding	Nfic	utr3	ENSMUSG00000055053	ProperStrand	69	1	-16.1553
chr17	35822057	35822257	protein_coding	Ddr1	exon	ENSMUSG00000003534	ProperStrand	129	chr1	192712615	192712631	protein_coding	Rps6kc1	exon	ENSMUSG00000089872	ProperStrand	241	1	-8.9912
chr18	73693165	73693187	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr16	87419153	87419202	snoRNA	ENSMUSG00000065647_SNORA2	.	ENSMUSG00000065647	ProperStrand	123	1	-4.1439
chr9	44182042	44182132	LTR	RLTR28	ERVL	chr9RLTR2844181720	NonProperStrand	1	chr16	91621812	91621892	protein_coding	Gart	exon	ENSMUSG00000022962	ProperStrand	200	1	-inf
chr2	76485226	76485316	protein_coding	Prkra	exon	ENSMUSG00000002731	ProperStrand	3	chr7	117189863	117189943	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-12.5479
chr17	34341455	34341472	protein_coding	Gm20496	intron	ENSMUSG00000092550	ProperStrand	1	chr18	35716733	35716823	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-inf
chr8	119983489	119983506	protein_coding	4933407C03Rik	utr3	ENSMUSG00000034390	NonProperStrand	32	chr19	9047557	9051866	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	1	-10.7327
chr15	9038778	9038805	protein_coding	1110020G09Rik	utr3	ENSMUSG00000022253	ProperStrand	15	chr9	120038611	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-9.3759
chrX	97875426	97884422	protein_coding	Kif4	exon	ENSMUSG00000034311	ProperStrand	24	chr10	23505559	23505621	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-9.3952
chr16	32243856	32243943	snoRNA	ENSMUSG00000080440_SNORA79	.	ENSMUSG00000080440	ProperStrand	140	chr16	23110902	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	11	-4.3366
chr18	32410990	32411006	protein_coding	Ercc3	intron	ENSMUSG00000024382	ProperStrand	280	chr9	78326383	78326436	protein_coding	Eef1a1	utr3	ENSMUSG00000037742	ProperStrand	1990	1	-3.3877
chr8	87195086	87195200	protein_coding	Nacc1	utr3	ENSMUSG00000001910	ProperStrand	130	chr15	34370545	34370581	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	11	-19.9326
chr6	125422515	125444607	protein_coding	Cd9	exon	ENSMUSG00000030342	ProperStrand	81	chr4	116883449	116883564	snRNA	ENSMUSG00000070237_U5	.	ENSMUSG00000070237	ProperStrand	154	1	-10.8182
chr12	36979862	36979878	protein_coding	1700108M19Rik	utr5	ENSMUSG00000020545	NonProperStrand	3	chr4	131908753	131908808	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-6.9471
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr7	117189863	117189932	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-2.0766
chr8	46129469	46129519	protein_coding	Fat1	utr5	ENSMUSG00000070047	ProperStrand	306	chr7	148634776	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-2.3946
chr7	106627451	106627874	protein_coding	Rps3	utr3	ENSMUSG00000030744	ProperStrand	159	chr11	97642952	97642978	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.0041
chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	chr15	38419507	38419543	protein_coding	Azin1	utr3	ENSMUSG00000037458	ProperStrand	13	1	-12.5126
chr2	24825186	24827046	protein_coding	Wdr85	exon	ENSMUSG00000026975	ProperStrand	323	chr1	162965531	162965562	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-1.4783
chr16	8858031	8858072	protein_coding	1810013L24Rik	utr3	ENSMUSG00000022507	ProperStrand	20	chr7	88529496	88529520	protein_coding	Cpeb1	intron	ENSMUSG00000025586	NonProperStrand	29	1	-16.9994
chr15	99463215	99466602	protein_coding	Racgap1	exon	ENSMUSG00000023015	ProperStrand	47	chr15	98350146	98350183	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-5.2339
chr1	37475690	37475723	protein_coding	6330578E17Rik	utr3	ENSMUSG00000026112	ProperStrand	14	chr13	51743568	51743661	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	2	-15.5719
chr1	184376797	184378551	protein_coding	Trp53bp2	exon	ENSMUSG00000026510	ProperStrand	19	chr1	88247803	88247829	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-7.3815
chr2	32563527	32563544	protein_coding	Cdk9	exon	ENSMUSG00000009555	NonProperStrand	49	chr10	23505152	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.5211
chr2	51968488	51971768	protein_coding	Rif1	exon	ENSMUSG00000036202	ProperStrand	201	chr1	180259499	180260059	protein_coding	Hnrnpu	exon	ENSMUSG00000039630	ProperStrand	286	1	-7.7673
chr6	31474332	31474432	protein_coding	Podxl	exon	ENSMUSG00000025608	ProperStrand	37	chr2	130101266	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-7.5549
chr4	42997503	42998043	protein_coding	Vcp	exon	ENSMUSG00000028452	ProperStrand	108	chr6	71832563	71832653	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-4.4748
chr8	72257971	72258043	LTR	RMER6A	ERVK	chr8RMER6A72257365	ProperStrand	4	chrX	34622906	34622983	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	4	-inf
chr4	135518096	135518142	protein_coding	Hmgcl	utr3	ENSMUSG00000028672	ProperStrand	8	chr4	137109642	137109660	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	1	-12.2353
chr10	41995244	41995263	protein_coding	Foxo3	utr5	ENSMUSG00000048756	ProperStrand	59	chr10	120709244	120712786	protein_coding	Tbc1d30	exon	ENSMUSG00000052302	ProperStrand	233	1	-10.6268
chr2	158185557	158185657	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	NonProperStrand	2	chr9	15119631	15119683	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	NonProperStrand	21	1	-inf
chr7	133641096	133641138	protein_coding	Atxn2l	exon	ENSMUSG00000032637	ProperStrand	219	chr15	34370584	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-1.3884
chr11	6305770	6305800	protein_coding	Zmiz2	utr3	ENSMUSG00000041164	ProperStrand	69	chr10	23505152	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-2.0680
chr2	165641276	165641322	protein_coding	Zmynd8	intron	ENSMUSG00000039671	NonProperStrand	23	chr10	23505190	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.7622
chr2	155984783	155998637	protein_coding	Rbm39	exon	ENSMUSG00000027620	ProperStrand	38	chr16	23110828	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-2.6677
chr11	87033747	87033788	protein_coding	Trim37	utr3	ENSMUSG00000018548	ProperStrand	17	chr1	162966009	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-9.9012
chr12	71146391	71146407	protein_coding	Nin	exon	ENSMUSG00000021068	ProperStrand	95	chr1	9932550	9932626	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-6.8158
chr12	34735983	34736000	protein_coding	Hdac9	utr3	ENSMUSG00000004698	ProperStrand	41	chr7	117189863	117189909	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-6.9650
chr4	55431652	55431668	lincRNA	Gm12505	exon	ENSMUSG00000087070	ProperStrand	447	chr5	115939508	115939588	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-3.9542
chr9	40611400	40611490	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr19	5105022	5105102	protein_coding	Rab1b	intron	ENSMUSG00000024870	ProperStrand	133	1	-6.5575
chr4	43505818	43505898	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr1	194571795	194571885	snRNA	ENSMUSG00000064881_U5	.	ENSMUSG00000064881	ProperStrand	187	1	-1.2404
chr11	72805895	72805995	protein_coding	Atp2a3	utr3	ENSMUSG00000020788	ProperStrand	29	chr9	15119360	15119425	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-6.5417
chr4	57706987	57707003	protein_coding	Palm2	intron	ENSMUSG00000090053	NonProperStrand	187	chr11	62418014	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-3.3989
chr5	74489241	74489331	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr15	75894113	75894913	protein_coding	Scrib	exon	ENSMUSG00000022568	ProperStrand	154	1	-3.8173
chr10	86164567	86164585	protein_coding	Hsp90b1	exon	ENSMUSG00000020048	ProperStrand	396	chr14	47863601	47864679	protein_coding	Wdhd1	exon	ENSMUSG00000037572	ProperStrand	35	1	-10.6203
chr15	81110991	81111009	SINE	ID4	ID	chr15ID481110956	ProperStrand	272	chr6	115757992	115758120	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-2.6555
chr5	144664031	144665495	protein_coding	Aimp2	exon	ENSMUSG00000029610	ProperStrand	10	chr11	6428087	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-10.9413
chr4	154984086	154984104	lincRNA	Gm16023	exon	ENSMUSG00000086682	ProperStrand	25	chr1	162965979	162965999	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-5.2802
chrX	103390003	103390057	protein_coding	Pgk1	exon	ENSMUSG00000062070	ProperStrand	484	chr8	32260335	32260421	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	4	-4.9024
chr9	15119967	15119995	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	chr16	23109048	23109090	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	2	-3.0881
chr5	116009525	116009814	protein_coding	Rplp0	utr5	ENSMUSG00000067274	ProperStrand	291	chr11	62416597	62416625	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-2.2738
chr2	24740186	24740203	protein_coding	Ehmt1	exon	ENSMUSG00000036893	NonProperStrand	16	chr17	24857714	24857794	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.7325
chr17	13115655	13115725	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	chr17	35089179	35089237	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	3	-2.3604
chr6	64088282	64088301	protein_coding	Grid2	intron	ENSMUSG00000071424	NonProperStrand	76	chr11	6428100	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.7712
chrX	129515605	129515623	LTR	RMER13B	ERVK	chrXRMER13B129515366	ProperStrand	1	chr16	23111372	23111446	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-inf
chr13	19684241	19684257	protein_coding	Epdr1	utr3	ENSMUSG00000002808	ProperStrand	46	chr1	137345619	137346480	protein_coding	Nav1	exon	ENSMUSG00000009418	NonProperStrand	60	1	-13.8534
chrX	71517609	71517709	protein_coding-noncoding	Rpl10	utr5	ENSMUSG00000008682	ProperStrand	4	chr7	150717362	150717428	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-11.1357
chr6	145161379	145161446	protein_coding	Lyrm5	intron	ENSMUSG00000040370	ProperStrand	4	chr16	23110913	23111003	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-inf
chr4	142163639	142163661	LINE	L2b	L2	chr4L2b142163586	ProperStrand	2	chr4	43505656	43505756	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	2	-inf
chr7	151765212	151765228	antisense	Gm10574	.	ENSMUSG00000073778	ProperStrand	357	chr6	71832629	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-2.3155
chr1	39605590	39605700	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	chr3	88497856	88497983	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	95	-20.0949
chr2	129998678	129998713	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chrX	83547356	83547372	protein_coding	Mageb4	intron	ENSMUSG00000035427	NonProperStrand	191	1	-5.8180
chr10	48338780	48338797	LINE	Lx5	L1	chr10Lx548337987	ProperStrand	6	chr17	13115763	13115782	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	1	-12.2830
chr10	75502561	75502651	protein_coding	Zfp280b	utr3	ENSMUSG00000049764	ProperStrand	25	chr9	15119650	15119730	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.2372
chr7	34992666	34999255	protein_coding	Gpi1	exon	ENSMUSG00000036427	ProperStrand	288	chr9	120038468	120038673	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	4	-3.5916
chr11	88050193	88050242	LTR	MLT1D	MaLR	chr11MLT1D88049920	ProperStrand	2	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-inf
chr7	151675914	151676003	protein_coding	Ppfia1	intron	ENSMUSG00000037519	ProperStrand	32	chr1	88247742	88247788	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-6.3333
chrX	90991960	90992060	protein_coding	Pcyt1b	utr3	ENSMUSG00000035246	ProperStrand	15	chr18	35714220	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-6.1300
chr15	76734979	76735034	protein_coding	Rpl8	exon	ENSMUSG00000003970	ProperStrand	191	chr1	89135785	89135802	protein_coding	Eif4e2	utr3	ENSMUSG00000026254	NonProperStrand	1	1	-inf
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr3	94583546	94583620	protein_coding	Cgn	exon	ENSMUSG00000068876	ProperStrand	14	4	-20.5944
mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr10	127522378	127522415	snoRNA	ENSMUSG00000093245_AC131120.1	.	ENSMUSG00000093245	ProperStrand	77	1	-5.4153
chr5	119192710	119195043	protein_coding	Med13l	exon	ENSMUSG00000018076	ProperStrand	226	chr7	118219574	118219650	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-1.8400
chr16	5256015	5256031	protein_coding	Fam86	utr5	ENSMUSG00000022544	ProperStrand	231	chr5	108334195	108334260	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-2.3586
chr16	37882962	37882980	protein_coding	Lrrc58	utr3	ENSMUSG00000034158	NonProperStrand	45	chr19	8963027	8963127	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-4.8387
chr6	72811763	72811781	protein_coding	Kcmf1	exon	ENSMUSG00000055239	NonProperStrand	3	chr3	123210863	123210963	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-8.0648
chr6	142344641	142344772	protein_coding	Golt1b	intron	ENSMUSG00000030245	ProperStrand	7	chrX	34622905	34622923	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-7.4170
chr14	124353869	124353886	protein_coding	Itgbl1	exon	ENSMUSG00000032925	ProperStrand	159	chr7	117190015	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-1.6841
chr12	111893772	111894515	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr3	123210858	123210982	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	18	-9.7032
chr9	30908072	30910552	protein_coding	St14	exon	ENSMUSG00000031995	ProperStrand	90	chr7	118219575	118219622	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	32	-21.6069
chr2	130103751	130103804	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	chr13	21367858	21367897	tRNA	tRNA73-ThrTGT	.	933714	ProperStrand	5	1	-13.6310
chr7	20282315	20282348	protein_coding	Apoe	exon	ENSMUSG00000002985	ProperStrand	231	chr9	99483993	99484009	protein_coding	Dbr1	exon	ENSMUSG00000032469	ProperStrand	162	1	-8.6211
chr2	79296778	79296822	protein_coding	Neurod1	utr5	ENSMUSG00000034701	ProperStrand	7	chr4	131908809	131908891	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.0493
chr3	104597108	104597189	protein_coding	Rhoc	utr3	ENSMUSG00000002233	ProperStrand	41	chr6	71832548	71832638	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	32	-inf
chr11	117217669	117223464	protein_coding	Sept9	exon	ENSMUSG00000059248	ProperStrand	60	chr5	130295431	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	2	-8.6236
chrX	148315090	148315172	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	chr5	123622050	123622066	protein_coding	Hpd	exon	ENSMUSG00000029445	ProperStrand	254	1	-6.1990
chr15	58577335	58577351	protein_coding	Fer1l6	intron	ENSMUSG00000037106	ProperStrand	54	chr6	113419923	113419940	protein_coding	Il17re	exon	ENSMUSG00000043088	NonProperStrand	12	1	-16.8471
chr4	155089610	155089652	protein_coding	Ssu72	exon	ENSMUSG00000029038	ProperStrand	7	chr15	98356826	98356898	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	1	-12.1702
chr12	109793137	109793155	lincRNA	Gm16596	intron	ENSMUSG00000087576	ProperStrand	1	chr4	131865857	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr17	30921111	30922017	protein_coding	Dnahc8	exon	ENSMUSG00000033826	ProperStrand	246	chr7	117189949	117190029	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-1.0707
chr11	75308751	75322904	protein_coding	Prpf8	exon	ENSMUSG00000020850	ProperStrand	255	chr16	38158134	38158226	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	2	-9.4169
chr14	52796288	52796365	protein_coding	Supt16h	exon	ENSMUSG00000035726	ProperStrand	193	chr19	8963027	8963178	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-1.3676
chr8	36529522	36529538	protein_coding	Eri1	utr3	ENSMUSG00000031527	NonProperStrand	97	chr19	8963027	8963174	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-2.8403
chr15	81734421	81735277	protein_coding	Aco2	exon	ENSMUSG00000022477	ProperStrand	237	chr11	59026073	59026137	protein_coding	Arf1	exon	ENSMUSG00000048076	ProperStrand	52	1	-10.8469
chr16	23111373	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	chr16	18240810	18240934	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	17	-5.8636
mmu-miR-2137	0	17	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	chr11	58795625	58795642	protein_coding	Trim11	exon	ENSMUSG00000020455	ProperStrand	43	1	-12.2280
mmu-miR-6412	2	22	miRNA	mmu-miR-6412	.	mmu-miR-6412	ProperStrand	3	chr18	35716786	35716883	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-8.1910
chr8	73223377	73223394	protein_coding	Jund	exon	ENSMUSG00000071076	ProperStrand	50	chr18	35714144	35714244	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-3.7805
chr4	116827121	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	chr11	62418014	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	3	-1.8090
chr5	31342782	31343065	protein_coding	Slc5a6	exon	ENSMUSG00000006641	ProperStrand	11	chr18	33954920	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	3	-15.8346
chrX	12741937	12742408	protein_coding	Usp9x	exon	ENSMUSG00000031010	ProperStrand	174	chr3	68889165	68889255	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-1.4881
chr1	138416292	138417787	protein_coding	Kif14	exon	ENSMUSG00000041498	ProperStrand	13	chr19	8963027	8963082	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.1201
chr10	76231439	76231539	protein_coding	Pcbp3	intron	ENSMUSG00000001120	ProperStrand	12	chr4	134878385	134878404	protein_coding	Srrm1	exon	ENSMUSG00000028809	NonProperStrand	25	5	-20.3151
chr1	136307509	136307579	protein_coding	Cyb5r1	exon	ENSMUSG00000026456	ProperStrand	12	chr19	59534008	59534026	protein_coding	Emx2	exon	ENSMUSG00000043969	NonProperStrand	87	1	-15.8247
chr8	113245625	113245641	protein_coding	Mtss1l	exon	ENSMUSG00000033763	ProperStrand	12	chr15	34370621	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-6.6995
chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	chr3	19210927	19210944	protein_coding	Pde7a	exon	ENSMUSG00000069094	NonProperStrand	1	1	-inf
chr11	96909821	96909864	protein_coding	Mrpl10	utr3	ENSMUSG00000001445	ProperStrand	43	chr10	128170648	128171173	protein_coding	Dgka	exon	ENSMUSG00000025357	ProperStrand	10	1	-17.7756
chr11	97698373	97698389	protein_coding	Lasp1	utr3	ENSMUSG00000038366	NonProperStrand	11	chr11	62416575	62416656	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-8.5772
chr19	5897809	5897826	protein_coding	Dpf2	utr3	ENSMUSG00000024826	NonProperStrand	7	chr9	15119287	15119361	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-9.4755
chrX	153899957	153899981	protein_coding	Sms	exon	ENSMUSG00000071708	ProperStrand	9	chr17	24665438	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	3	-19.8956
mmu-miR-706	1	18	miRNA	mmu-miR-706	.	mmu-miR-706	ProperStrand	6	chr19	8963027	8963117	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-6.7266
chr17	88381459	88382946	protein_coding	Msh6	exon	ENSMUSG00000005370	ProperStrand	150	chr8	73419657	73419715	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-2.9741
chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	chr3	88903288	88903356	protein_coding	Fdps	exon	ENSMUSG00000059743	ProperStrand	12	2	-19.1727
chr6	45965480	46120177	protein_coding	Cntnap2	exon	ENSMUSG00000039419	NonProperStrand	283	chr9	120039533	120039622	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-0.8887
chr7	3597128	3607554	protein_coding	Cnot3	utr5	ENSMUSG00000035632	ProperStrand	55	chr16	23110916	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-0.9304
chr1	36264825	36264877	protein_coding	Uggt1	exon	ENSMUSG00000037470	ProperStrand	67	chr16	23111377	23111482	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-5.0305
chr4	150517507	150517538	protein_coding	Camta1	intron	ENSMUSG00000014592	ProperStrand	170	chr9	44524606	44524622	protein_coding	Phldb1	exon	ENSMUSG00000048537	ProperStrand	17	1	-13.7849
chrX	71517007	71517171	protein_coding	Rpl10	exon	ENSMUSG00000008682	ProperStrand	71	chr16	23111695	23111785	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.6423
chr7	31895791	31899711	protein_coding	Hpn	utr5	ENSMUSG00000001249	ProperStrand	126	chr7	117190016	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.0488
chr13	23713828	23713918	protein_coding	Hist1h1e	exon	ENSMUSG00000051627	ProperStrand	41	chr10	23505199	23505279	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.7922
chr13	27380648	27380728	LTR	IAPEz-int	ERVK	chr13IAPEz-int27380576	NonProperStrand	1	chr14	80262211	80262301	lincRNA	Gm6999	intron	ENSMUSG00000075495	ProperStrand	265	1	-inf
chr8	125626932	125626970	protein_coding-noncoding	Rpl13	utr5	ENSMUSG00000000740	ProperStrand	9	chr7	116664841	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	4	-18.8391
chr9	20945541	20946506	protein_coding	Cdc37	exon	ENSMUSG00000019471	ProperStrand	97	chr10	110918566	110918646	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	3	-6.7851
chr5	135095925	135095959	protein_coding	Eif4h	utr3	ENSMUSG00000040731	ProperStrand	46	chr1	173433177	173433233	protein_coding	B930036N10Rik	utr3	ENSMUSG00000091993	ProperStrand	150	1	-12.0103
chr7	116663486	116664040	protein_coding	Rpl27a	exon	ENSMUSG00000046364	ProperStrand	149	chr19	8800384	8800474	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-1.9536
chr14	55268612	55268712	protein_coding-noncoding	Acin1	utr3	ENSMUSG00000022185	ProperStrand	15	chr16	23110962	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.0842
chr10	82829562	82829676	protein_coding	D10Wsu102e	utr3	ENSMUSG00000020255	ProperStrand	42	chr3	82816757	82816773	protein_coding	Fgg	exon	ENSMUSG00000033860	NonProperStrand	321	1	-10.6713
chrX	122777419	122777439	pseudogene	Gm14957	.	ENSMUSG00000083294	ProperStrand	2	chr9	15119632	15119692	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-inf
chr9	40610671	40613023	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr4	131865856	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	11	-1.2355
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr5	137957472	137957515	protein_coding	Epo	intron	ENSMUSG00000029711	NonProperStrand	4	1	-11.5429
chr1	37964250	37964270	protein_coding	Lyg2	utr3	ENSMUSG00000061584	ProperStrand	1	chr3	68889324	68889369	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-inf
chr15	98604924	98606960	protein_coding	Wnt10b	exon	ENSMUSG00000022996	NonProperStrand	189	chr4	3761805	3762110	protein_coding	Rps20	exon	ENSMUSG00000028234	ProperStrand	71	1	-10.6731
chr10	100910489	100910579	LINE	L1Md_A	L1	chr10L1Md_A100908312	NonProperStrand	1	chr7	54443434	54443524	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	1	-inf
chr11	69555358	69555422	protein_coding	Polr2a	exon	ENSMUSG00000005198	ProperStrand	200	chr9	15118245	15118335	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-1.4536
chr4	108291698	108291761	lincRNA	Gm12743	intron	ENSMUSG00000084968	ProperStrand	2	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-9.5181
chr5	111214878	111214959	protein_coding	Ulk1	utr3	ENSMUSG00000029512	ProperStrand	92	chr7	51505525	51505591	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	1	-7.9257
chr16	91044767	91044783	protein_coding	Gcfc1	utr5	ENSMUSG00000022974	ProperStrand	17	chr4	116827870	116827892	snoRNA	ENSMUSG00000064751_SNORD46	.	ENSMUSG00000064751	ProperStrand	132	1	-14.2922
chr18	67841178	67841194	protein_coding	Ptpn2	exon	ENSMUSG00000024539	ProperStrand	35	chr6	85409193	85409209	protein_coding	Cct7	exon	ENSMUSG00000030007	ProperStrand	173	1	-12.2783
chr14	3928947	3930298	protein_coding	Gm3002	intron	ENSMUSG00000079399	ProperStrand	26	chr10	23505152	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-4.5156
chr15	101039530	101039581	protein_coding	Acvr1b	exon	ENSMUSG00000000532	ProperStrand	259	chr5	116010780	116010829	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	1	-7.2304
chr15	93115854	93115871	protein_coding	Yaf2	exon	ENSMUSG00000022634	NonProperStrand	1	chr9	78327926	78327944	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-inf
chr1	72871150	72895851	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	chr4	131865856	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	7	-1.9972
chr17	25526309	25526355	protein_coding	Cacna1h	exon	ENSMUSG00000024112	ProperStrand	30	chr2	37255577	37255618	snoRNA	ENSMUSG00000077756_Snord90	.	ENSMUSG00000077756	ProperStrand	167	2	-20.4250
chr3	156224612	156224628	lincRNA	4930570G19Rik	exon	ENSMUSG00000085084	ProperStrand	326	chr2	32818886	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-2.3466
chr7	132624755	132624773	protein_coding	Nsmce1	intron	ENSMUSG00000030750	ProperStrand	5	chr5	124895563	124895651	protein_coding	Setd8	utr5	ENSMUSG00000049327	ProperStrand	71	1	-18.1063
chr10	90581059	90581195	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	chr3	68889026	68889116	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	39	-7.5664
chr9	119349474	119349584	lincRNA	Gm16707	exon	ENSMUSG00000086780	NonProperStrand	17	chr16	30514154	30514171	protein_coding	Tmem44	utr3	ENSMUSG00000022537	ProperStrand	217	1	-13.2978
chr18	41356147	41356184	miRNA	Mir5097	dead	ENSMUSG00000093361	ProperStrand	221	chr11	6428076	6428154	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.1088
chr16	35932620	35932636	protein_coding	Dtx3l	exon	ENSMUSG00000049502	ProperStrand	152	chr16	23110454	23110509	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.0534
chr9	62641762	62641862	protein_coding	Fem1b	utr3	ENSMUSG00000032244	ProperStrand	111	chr2	26768068	26768119	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	1	-7.1677
chr8	98227529	98227546	protein_coding	Ndrg4	intron	ENSMUSG00000036564	ProperStrand	22	chr5	143648356	143648373	protein_coding	Fbxl18	exon	ENSMUSG00000066640	ProperStrand	64	1	-15.2032
chr19	48871458	48871474	protein_coding	Sorcs3	intron	ENSMUSG00000063434	NonProperStrand	43	chr7	116663692	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.0984
chr7	117189864	117189944	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr8	113362431	113362490	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	3	-6.4091
chrX	71533839	71534003	protein_coding	Taz	exon	ENSMUSG00000009995	ProperStrand	59	chr15	96846562	96846606	protein_coding	Slc38a4	exon	ENSMUSG00000022464	ProperStrand	139	1	-11.6603
chr14	75156874	75156922	protein_coding	Lrch1	exon	ENSMUSG00000068015	ProperStrand	14	chr8	34802361	34802416	snoRNA	ENSMUSG00000088856_SNORA48	.	ENSMUSG00000088856	ProperStrand	236	1	-13.5315
chr15	103129734	103129766	protein_coding	Copz1	utr3	ENSMUSG00000060992	ProperStrand	45	chr18	35716794	35716884	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	6	-15.1769
chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	chr2	130101261	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-2.8793
chr6	94776854	94776877	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	chr12	17552939	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	4	-5.8275
chr11	78064662	78068375	protein_coding	Sdf2	exon	ENSMUSG00000002064	ProperStrand	5	chrX	34622906	34622930	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-8.1517
chr7	131222888	131222911	protein_coding	Hs3st4	intron	ENSMUSG00000078591	ProperStrand	5	chr16	23110530	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-7.3464
chr7	54051620	54057046	protein_coding	Gtf2h1	utr5	ENSMUSG00000006599	ProperStrand	9	chr5	64203925	64203942	protein_coding	0610040J01Rik	intron	ENSMUSG00000060512	ProperStrand	36	1	-18.0731
chrX	68682337	68691328	protein_coding	Cd99l2	exon	ENSMUSG00000035776	ProperStrand	16	chr4	131908389	131908440	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-6.2934
chr13	85940822	85940845	LINE	L1_Mus4	L1	chr13L1_Mus485940642	NonProperStrand	1	chr10	80992166	80992221	protein_coding	Gna11	utr3	ENSMUSG00000034781	ProperStrand	23	1	-inf
chr2	83504055	83504155	protein_coding	Zc3h15	exon	ENSMUSG00000027091	ProperStrand	37	chr16	23111459	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.9851
chrX	13269163	13269180	protein_coding	Cask	intron	ENSMUSG00000031012	ProperStrand	41	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-8.5027
chr13	34967612	34967636	protein_coding	Prpf4b	intron	ENSMUSG00000021413	ProperStrand	50	chr10	110918595	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	4	-12.4833
chr11	99885311	99885327	protein_coding	Krt33b	exon	ENSMUSG00000057723	NonProperStrand	352	chr15	79908937	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	3	-5.9600
chr14	56159294	56159312	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	chr4	131865856	131865946	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-1.4830
chr4	130508062	130508121	protein_coding	Matn1	exon	ENSMUSG00000040533	ProperStrand	2	chr6	115758029	115758119	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-12.8899
chr4	86434096	86434150	protein_coding	Dennd4c	intron	ENSMUSG00000038024	ProperStrand	42	chr6	71832550	71832577	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-6.3140
chr13	9833559	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr17	12890973	12891009	protein_coding	Igf2r	exon	ENSMUSG00000023830	ProperStrand	151	1	-3.2222
chr3	41417415	41417509	protein_coding	Phf17	exon	ENSMUSG00000025764	ProperStrand	101	chr5	111121066	111121095	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-5.4123
chr14	76247725	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	chr19	8799409	8799434	snoRNA	ENSMUSG00000065280_SNORD28	.	ENSMUSG00000065280	ProperStrand	269	1	-1.5761
chr2	90235290	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	162968442	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	11	-3.8140
chr11	101304972	101306612	protein_coding	Rpl27	exon	ENSMUSG00000063316	ProperStrand	96	chr15	98350144	98350201	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-3.8686
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr6	47225593	47225609	protein_coding	Cntnap2	intron	ENSMUSG00000039419	NonProperStrand	283	1	-8.2668
chr11	77996324	77996394	protein_coding	Rpl23a	exon	ENSMUSG00000058546	ProperStrand	121	chr8	113366283	113366323	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	1	-7.7778
chr2	121041602	121041702	protein_coding	Trp53bp1	exon	ENSMUSG00000043909	ProperStrand	45	chr7	29136576	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.8631
chr8	83229227	83229403	protein_coding	Smarca5	exon	ENSMUSG00000031715	ProperStrand	115	chr19	8800423	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-4.2098
chr11	97643033	97643080	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	chr5	101260412	101260433	snoRNA	ENSMUSG00000077354_SNORA42	.	ENSMUSG00000077354	ProperStrand	22	1	-4.3090
chr8	82217328	82217428	protein_coding	Abce1	exon	ENSMUSG00000058355	ProperStrand	66	chr11	77996557	77996619	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-5.9044
chr1	38110962	38111028	protein_coding	Rev1	exon	ENSMUSG00000026082	ProperStrand	48	chr4	86502059	86502149	protein_coding	Rps6	exon	ENSMUSG00000028495	ProperStrand	263	1	-10.8003
chr3	139516656	139516675	LINE	L1MC1	L1	chr3L1MC1139516418	NonProperStrand	8	chr18	35716763	35716812	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-5.9895
chr10	126771262	126771290	protein_coding	Gli1	exon	ENSMUSG00000025407	ProperStrand	48	chr7	86244450	86244468	protein_coding	Acan	exon	ENSMUSG00000030607	ProperStrand	38	1	-14.6805
chr8	46125950	46126011	protein_coding	Fat1	exon	ENSMUSG00000070047	ProperStrand	306	chr19	8798774	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-1.8854
chr18	85039195	85039216	protein_coding	Cyb5	intron	ENSMUSG00000024646	ProperStrand	12	chr5	108334197	108334322	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-8.0381
chrX	136751079	136751095	lincRNA	Gm15046	intron	ENSMUSG00000086441	ProperStrand	1	chr1	138074188	138074254	protein_coding	Kif21b	utr3	ENSMUSG00000041642	ProperStrand	77	1	-inf
chr6	72848823	72848840	protein_coding	Kcmf1	intron	ENSMUSG00000055239	ProperStrand	26	chr12	55835639	55835702	snRNA	ENSMUSG00000075960_U1	.	ENSMUSG00000075960	ProperStrand	210	2	-inf
chr3	94227664	94227683	protein_coding	Tdrkh	exon	ENSMUSG00000041912	NonProperStrand	2	chr7	116664841	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-9.7350
chr19	55573065	55573742	protein_coding	Vti1a	exon	ENSMUSG00000024983	ProperStrand	14	chr15	5068446	5068480	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-8.9991
chr11	97605767	97605814	protein_coding	Pip4k2b	exon	ENSMUSG00000018547	ProperStrand	46	chr17	35299507	35299563	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	3	-12.4114
chrX	82147343	82147360	protein_coding	Dmd	intron	ENSMUSG00000045103	ProperStrand	38	chr2	144087414	144087462	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-7.4555
chr5	74489543	74489563	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr1	173433177	173433253	protein_coding	B930036N10Rik	utr3	ENSMUSG00000091993	ProperStrand	150	3	-9.4362
chr1	183746821	183746870	protein_coding	Lbr	utr3	ENSMUSG00000004880	ProperStrand	97	chr9	120038576	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.2100
chr18	80325448	80325470	protein_coding	Adnp2	exon	ENSMUSG00000053950	ProperStrand	36	chr12	112779159	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	3	-13.4070
chr8	109065341	109067578	protein_coding	Cdh3	exon	ENSMUSG00000061048	ProperStrand	62	chr9	120039574	120039664	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.2590
chr10	20049161	20051952	protein_coding	Bclaf1	exon	ENSMUSG00000037608	ProperStrand	83	chr11	97642952	97643011	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.9358
chr7	95266597	95266613	protein_coding	Grm5	intron	ENSMUSG00000049583	NonProperStrand	145	chr5	108336377	108336414	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-3.2264
chr15	99327671	99327688	protein_coding	Faim2	utr3	ENSMUSG00000023011	ProperStrand	45	chr16	23111384	23111477	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.6772
chr1	71650402	71676011	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr5	108334243	108336491	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	7	-6.6062
chr8	124406546	124406636	protein_coding	Slc7a5	utr3	ENSMUSG00000040010	ProperStrand	166	chr12	55797798	55797878	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	1	-5.6873
chrX	131484916	131484932	protein_coding	Nxf2	exon	ENSMUSG00000009941	NonProperStrand	1	chr16	23111374	23111474	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	NonProperStrand	38	1	-inf
chr9	123501272	123501330	protein_coding	Sacm1l	utr3	ENSMUSG00000025240	ProperStrand	12	chr7	116663633	116663715	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	4	-17.7387
chr2	71258729	71258756	protein_coding	Hat1	exon	ENSMUSG00000027018	ProperStrand	53	chr16	3847573	3847589	protein_coding	Zfp174	utr5	ENSMUSG00000054939	NonProperStrand	166	1	-11.5214
chr15	41904064	41904082	LINE	L1Md_F3	L1	chr15L1Md_F341903698	NonProperStrand	1	chr11	78157170	78157255	protein_coding	Unc119	exon	ENSMUSG00000002058	ProperStrand	7	1	-inf
chr3	102981318	102982319	protein_coding	Bcas2	exon	ENSMUSG00000005687	ProperStrand	19	chr10	23505149	23505255	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	7	-inf
chr11	69037669	69037685	protein_coding	Gucy2e	exon	ENSMUSG00000020890	NonProperStrand	99	chr12	50485931	50485947	protein_coding	Foxg1	exon	ENSMUSG00000020950	NonProperStrand	26	1	-14.0026
chr4	149382350	149382427	protein_coding	H6pd	intron	ENSMUSG00000028980	ProperStrand	14	chr7	116663634	116663696	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-5.2435
chr2	104846953	104853012	protein_coding	Eif3m	exon	ENSMUSG00000027170	ProperStrand	14	chr3	123210854	123210889	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-7.9226
chr4	135423660	135423744	protein_coding	Srsf10	utr3	ENSMUSG00000028676	ProperStrand	31	chr16	38158200	38158226	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	2	-15.7528
chr6	125444653	125444698	protein_coding	Cd9	utr5	ENSMUSG00000030342	ProperStrand	81	chr10	23505190	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-1.7308
chr2	86196476	86196493	protein_coding	Olfr1056	exon	ENSMUSG00000075188	NonProperStrand	2	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-inf
chr11	93944105	93944195	protein_coding	Spag9	exon	ENSMUSG00000020859	ProperStrand	23	chr3	108357272	108357352	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	8	-20.2356
chr16	57122113	57122213	protein_coding	Tomm70a	exon	ENSMUSG00000022752	ProperStrand	82	chr6	115757992	115758010	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-4.8658
chr14	66093251	66093268	LTR	MLT1A1	MaLR	chr14MLT1A166093179	ProperStrand	31	chr12	106269350	106269445	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-5.4160
chr4	149615171	149616234	protein_coding	Eno1	exon	ENSMUSG00000063524	ProperStrand	432	chr3	108357255	108357311	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-1.1826
chr1	74024375	74149144	protein_coding	Tns1	intron	ENSMUSG00000055322	ProperStrand	63	chr16	23111374	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	11	-21.2709
chrX	100517086	100517102	protein_coding	Cdx4	exon	ENSMUSG00000031326	NonProperStrand	30	chr15	34370619	34370676	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-4.8662
chr5	122580412	122584741	protein_coding	Ccdc63	utr5	ENSMUSG00000043036	ProperStrand	120	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	2	-12.0738
chr5	39062082	39062214	protein_coding	Zfp518b	utr3	ENSMUSG00000046572	ProperStrand	95	chr11	35882979	35882995	protein_coding	Odz2	exon	ENSMUSG00000049336	ProperStrand	106	1	-11.2467
chr4	62051356	62051489	protein_coding	Slc31a1	utr3	ENSMUSG00000066150	ProperStrand	45	chr7	109236156	109236174	protein_coding	Trpc2	exon	ENSMUSG00000070425	NonProperStrand	26	1	-15.5721
chr8	125723583	125723848	protein_coding	Dpep1	exon	ENSMUSG00000019278	NonProperStrand	2	chr11	106362304	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-13.2734
chr19	5844630	5844654	non_coding	Neat1	.	ENSMUSG00000092274	ProperStrand	63	chr11	97490379	97490484	protein_coding	E130012A19Rik	exon	ENSMUSG00000043439	ProperStrand	83	1	-12.5631
chr2	166862235	166862335	protein_coding	Znfx1	exon	ENSMUSG00000039501	ProperStrand	32	chr4	131866223	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	19	-19.4168
chr14	94131457	94131473	protein_coding	Pcdh9	intron	ENSMUSG00000055421	ProperStrand	59	chr11	6428099	6428170	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.2227
chr7	20241119	20241148	protein_coding	Clptm1	exon	ENSMUSG00000002981	ProperStrand	109	chr13	90238600	90238690	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	1	-7.4557
chr10	127995749	127995849	protein_coding	Pa2g4	utr3	ENSMUSG00000025364	ProperStrand	72	chr14	76247783	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-3.8292
chr4	131399490	131399506	protein_coding	Mecr	exon	ENSMUSG00000028910	NonProperStrand	109	chr11	77996560	77996610	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-4.9279
chr2	22485575	22490461	protein_coding	Gad2	exon	ENSMUSG00000026787	NonProperStrand	7	chr2	121837355	121837371	protein_coding	Ctdspl2	utr3	ENSMUSG00000033411	NonProperStrand	3	1	-inf
chr4	41160815	41160853	protein_coding	Ubap2	utr5	ENSMUSG00000028433	ProperStrand	292	chr12	17552949	17553029	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	3	-5.9214
chr1	134401005	134401021	protein_coding	Rbbp5	utr3	ENSMUSG00000026439	NonProperStrand	33	chr17	13112450	13112528	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-5.7443
chr1	173847693	173847709	protein_coding	Slamf6	utr5	ENSMUSG00000015314	ProperStrand	17	chr11	69483137	69483237	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.7874
chr5	116457358	116457458	protein_coding	Cit	utr3	ENSMUSG00000029516	ProperStrand	45	chr19	8799610	8799644	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-7.3395
chr16	33956901	33956953	protein_coding	Umps	exon	ENSMUSG00000022814	ProperStrand	20	chr15	5068441	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	2	-13.2278
chr5	116038998	116039090	protein_coding	Gcn1l1	exon	ENSMUSG00000041638	ProperStrand	408	chr17	35087894	35087923	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-1.7608
chr5	116061109	116061209	protein_coding	Gcn1l1	exon	ENSMUSG00000041638	ProperStrand	408	chr18	35102297	35102337	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-2.9460
chr7	133691143	133691293	protein_coding	Eif3c	exon	ENSMUSG00000030738	ProperStrand	92	chr2	130101988	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	5	-17.9644
chr7	144651194	144651219	protein_coding	Glrx3	exon	ENSMUSG00000031068	ProperStrand	35	chr16	23110966	23111003	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.8578
chr9	107474638	107474728	protein_coding	Hyal2	exon	ENSMUSG00000010047	ProperStrand	20	chr4	131865860	131865940	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-12.4569
chr2	90235303	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	ProperStrand	24	chr4	131908793	131908895	lincRNA	Gm17300	exon	ENSMUSG00000091021	ProperStrand	109	1	-13.9683
chr4	43505657	43505723	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr14	15572354	15572371	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	1	-1.4149
chr11	79769113	79769148	protein_coding	Utp6	exon	ENSMUSG00000035575	ProperStrand	28	chr1	162965536	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.7132
chr11	120645349	120645365	protein_coding	Rfng	exon	ENSMUSG00000025158	NonProperStrand	13	chr11	69483151	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-8.8334
chr13	68759738	68764669	protein_coding	Adcy2	exon	ENSMUSG00000021536	ProperStrand	237	chr18	73693166	73693186	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-2.9431
chr8	75091408	75091439	protein_coding	9130011J15Rik	utr3	ENSMUSG00000044600	ProperStrand	9	chr9	15118342	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-7.2077
chr1	173934976	173936299	protein_coding	Vangl2	exon	ENSMUSG00000026556	ProperStrand	37	chr9	63868722	63868739	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	4	-19.5289
chr6	51413455	51414109	protein_coding	Hnrnpa2b1	exon	ENSMUSG00000004980	ProperStrand	166	chr16	23111696	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	6	-5.7731
chr7	13516175	13516191	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr5	130295428	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-1.2109
chr10	16844327	16844347	LINE	L1_Mur1	L1	chr10L1_Mur116843303	ProperStrand	76	chr10	23505193	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-1.8620
chr5	37667536	37667552	protein_coding	Crmp1	exon	ENSMUSG00000029121	ProperStrand	85	chr9	50816824	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	1	-11.1077
chr1	84692463	84692479	miRNA	Mir5126	.	ENSMUSG00000093254	ProperStrand	15	chr6	31429443	31429492	protein_coding	Mkln1	intron	ENSMUSG00000025609	ProperStrand	18	1	-18.6475
chr11	106123580	106123765	protein_coding	Psmc5	exon	ENSMUSG00000020708	ProperStrand	51	chr9	15119631	15119673	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.9150
chr4	132971255	132971355	protein_coding	Slc9a1	exon	ENSMUSG00000028854	ProperStrand	28	chr7	117189995	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.7726
chr11	57874139	57874232	protein_coding	Larp1	utr3	ENSMUSG00000037331	ProperStrand	201	chr1	162966003	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-1.5552
chr3	45780645	45780665	LINE	Lx2B	L1	chr3Lx2B45780445	ProperStrand	34	chr8	13416896	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-7.5866
chr16	22871145	22871784	protein_coding	Dnajb11	exon	ENSMUSG00000004460	ProperStrand	9	chr16	23110829	23110894	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-11.2656
chr14	87659491	87659512	LTR	MTEa	MaLR	chr14MTEa87659331	NonProperStrand	83	chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	1	-8.0668
chr9	64023526	64023938	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	chr17	34672918	34672958	protein_coding	Btnl7	intron	ENSMUSG00000061728	ProperStrand	3	1	-15.0544
chr10	41439381	41439452	protein_coding	Cep57l1	utr3	ENSMUSG00000019813	ProperStrand	36	chr6	124765373	124765432	protein_coding	Usp5	utr3	ENSMUSG00000038429	ProperStrand	35	1	-15.4465
chr19	5751171	5751271	protein_coding	Ltbp3	exon	ENSMUSG00000024940	ProperStrand	11	chr3	123210854	123210891	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	9	-20.9787
chr6	71348500	71349215	protein_coding	Rmnd5a	exon	ENSMUSG00000002222	ProperStrand	38	chr3	96494399	96494415	protein_coding	Ankrd35	intron	ENSMUSG00000038354	ProperStrand	5	1	-18.6660
chr14	76247751	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	chr18	74938208	74938298	snoRNA	ENSMUSG00000089235_SCARNA17	.	ENSMUSG00000089235	ProperStrand	1128	5	-1.9182
chr11	50044752	50045246	protein_coding	Mgat4b	exon	ENSMUSG00000036620	ProperStrand	10	chr6	115757990	115758080	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-9.0913
chr15	98350146	98350200	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	chr5	92485098	92485198	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	1	-0.9335
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr13	76341035	76341055	protein_coding	Fam81b	intron	ENSMUSG00000078966	NonProperStrand	220	1	-6.0168
chrX	156315496	156315519	protein_coding	Sh3kbp1	intron	ENSMUSG00000040990	ProperStrand	67	chr16	23111374	23111448	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-2.1734
chrX	117811343	117811361	protein_coding	Pcdh11x	intron	ENSMUSG00000034755	ProperStrand	15	chr10	80643112	80643327	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-8.8893
chr1	29625554	29625644	LINE	L1Md_F2	L1	chr1L1Md_F229624872	ProperStrand	1	chr6	68368044	68368124	LINE	L1Md_F2	L1	chr6L1Md_F268367974	ProperStrand	1	1	-inf
chr8	73282295	73282385	protein_coding	Rab3a	utr3	ENSMUSG00000031840	ProperStrand	7	chr11	68886949	68887029	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-8.4665
chr19	42175182	42175243	protein_coding	Pi4k2a	exon	ENSMUSG00000025178	ProperStrand	23	chr16	23110971	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.7108
chr2	129998664	129998713	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr10	6063958	6063977	protein_coding	Akap12	intron	ENSMUSG00000038587	ProperStrand	1008	1	-2.7081
chrX	98515371	98515388	protein_coding	Nlgn3	exon	ENSMUSG00000031302	ProperStrand	6	chr8	96543483	96543583	protein_coding	Nudt21	utr3	ENSMUSG00000031754	ProperStrand	33	1	-18.5509
chr14	72301755	72301771	SINE	B4	B4	chr14B472301692	NonProperStrand	99	chr12	113883221	113883281	protein_coding	Siva1	exon	ENSMUSG00000064326	ProperStrand	7	1	-16.7969
chr19	45126942	45128167	protein_coding	Sfxn3	exon	ENSMUSG00000025212	NonProperStrand	22	chr16	23110894	23110981	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.8207
chr11	102700881	102701431	protein_coding	Eftud2	exon	ENSMUSG00000020929	ProperStrand	86	chr3	123210854	123210929	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.5085
chr17	57161042	57161142	protein_coding	Khsrp	utr3	ENSMUSG00000007670	ProperStrand	353	chr12	112779227	112779253	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-1.6455
chr16	44140128	44140220	protein_coding	Naa50	utr5	ENSMUSG00000022698	ProperStrand	56	chr18	75160711	75160776	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	3	-19.0609
chr11	70791574	70791690	protein_coding	C1qbp	utr3	ENSMUSG00000018446	ProperStrand	46	chr7	140955174	140955198	protein_coding	Dhx32	intron	ENSMUSG00000030986	ProperStrand	100	1	-12.8243
chr11	90510686	90511138	protein_coding	Tom1l1	exon	ENSMUSG00000020541	ProperStrand	7	chr16	56035882	56035962	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	3	-19.9309
chr5	74489201	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr17	24856616	24856735	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	5	-2.7460
chr6	13555844	13555934	protein_coding-noncoding	Tmem168	utr3	ENSMUSG00000029569	ProperStrand	1	chr6	13555712	13555802	protein_coding	Tmem168	intron	ENSMUSG00000029569	ProperStrand	17	1	-inf
chr7	118224456	118224472	protein_coding	Eif4g2	exon	ENSMUSG00000005610	ProperStrand	134	chr2	22444741	22444797	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-6.1843
chr11	23251230	23251320	protein_coding	Usp34	intron	ENSMUSG00000056342	ProperStrand	68	chr9	15118245	15118319	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.2382
chr17	34752046	34752126	processed_transcript	Gm20460	.	ENSMUSG00000092176	NonProperStrand	15	chr17	34752147	34752238	protein_coding	Egfl8	utr5	ENSMUSG00000015467	NonProperStrand	14	14	-inf
chr7	140182809	140183252	protein_coding	Ctbp2	exon	ENSMUSG00000030970	ProperStrand	89	chr16	23111695	23111751	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.3138
chr1	162965531	162965588	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr3	153574575	153574654	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	3	-2.1100
chr3	46250241	46250282	protein_coding	Pabpc4l	exon	ENSMUSG00000090919	ProperStrand	137	chr10	80641695	80641759	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	6	-inf
chr19	44377594	44377684	protein_coding	Scd2	exon	ENSMUSG00000025203	ProperStrand	219	chr7	133938778	133938858	protein_coding	Aldoa	utr3	ENSMUSG00000030695	ProperStrand	721	1	-5.7778
chr14	32615609	32615681	protein_coding	Ankrd28	intron	ENSMUSG00000014496	ProperStrand	39	chr7	116664812	116664902	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.3149
chr15	36526758	36526826	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	1	-1.9716
chr14	31381360	31381413	protein_coding	Tkt	exon	ENSMUSG00000021957	ProperStrand	160	chr19	44375927	44377583	protein_coding	Scd2	exon	ENSMUSG00000025203	ProperStrand	219	1	-8.7521
mmu-miR-6240	3	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr5	144288790	144288857	protein_coding	Rac1	utr5	ENSMUSG00000001847	ProperStrand	32	2	-11.5190
chr12	99497602	99497618	protein_coding	Galc	utr5	ENSMUSG00000021003	NonProperStrand	65	chr4	41160829	41160879	protein_coding	Ubap2	utr5	ENSMUSG00000028433	ProperStrand	292	1	-9.9809
chrX	12867377	12867451	protein_coding	Ddx3x	exon	ENSMUSG00000000787	ProperStrand	67	chr9	47608249	47608266	protein_coding	Cadm1	intron	ENSMUSG00000032076	ProperStrand	77	1	-12.5906
chr19	4317019	4317039	protein_coding	Kdm2a	utr3	ENSMUSG00000054611	ProperStrand	71	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-7.8227
chr7	4909060	4909078	protein_coding	Sbk2	exon	ENSMUSG00000030433	ProperStrand	1	chr6	45965480	46120177	protein_coding	Cntnap2	exon	ENSMUSG00000039419	NonProperStrand	283	1	-inf
chr6	115758049	115758134	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr4	86232397	86232487	snoRNA	ENSMUSG00000088958_Scarna8	.	ENSMUSG00000088958	ProperStrand	366	1	-2.1562
chr4	41142384	41142484	protein_coding	Ubap2	exon	ENSMUSG00000028433	ProperStrand	292	chr5	108334194	108334235	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	2	-3.5667
chr5	78278338	78278428	LINE	L1Md_T	L1	chr5L1Md_T78272385	NonProperStrand	1	chr1	12658212	12658292	lincRNA	Gm17644	exon	ENSMUSG00000066918	ProperStrand	10	1	-inf
chr9	110357890	110357915	protein_coding	Klhl18	exon	ENSMUSG00000054792	ProperStrand	4	chr14	31827477	31827545	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	4	-inf
chr17	34089491	34092050	protein_coding	Rps18	exon	ENSMUSG00000008668	ProperStrand	111	chr11	113730275	113731050	protein_coding	Sdk2	exon	ENSMUSG00000041592	NonProperStrand	98	1	-11.0919
chr7	72456079	72457233	protein_coding	Tjp1	exon	ENSMUSG00000030516	ProperStrand	78	chr12	55797800	55797896	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	2	-11.5254
chr17	29712116	29712132	protein_coding	Tbc1d22b	exon	ENSMUSG00000042203	ProperStrand	21	chr4	131865855	131865979	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.5891
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr18	33954817	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	9	-10.3405
chr5	98904594	98904671	protein_coding	1700007G11Rik	intron	ENSMUSG00000057816	NonProperStrand	8	chr4	122968596	122968686	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-10.3910
chr19	6248245	6248262	protein_coding	Atg2a	exon	ENSMUSG00000024773	NonProperStrand	9	chrX	40944841	40944857	protein_coding	Gm362	exon	ENSMUSG00000078320	ProperStrand	129	1	-15.6638
chr8	59966247	59966347	protein_coding	Sap30	exon	ENSMUSG00000031609	ProperStrand	16	chr4	131908232	131908300	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.6705
chr8	89862849	89862939	SINE	B4A	B4	chr8B4A89862692	NonProperStrand	1	chr9	10234684	10234764	protein_coding	Cntn5	intron	ENSMUSG00000039488	NonProperStrand	10	1	-inf
chr2	142510825	142510843	protein_coding	Kif16b	intron	ENSMUSG00000038844	NonProperStrand	6	chr16	23110828	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.7876
chr9	48877878	48879712	protein_coding	Zw10	exon	ENSMUSG00000032264	ProperStrand	20	chr5	130300532	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	4	-14.6748
chr5	122624829	122624877	protein_coding	Ppp1cc	utr3	ENSMUSG00000004455	ProperStrand	46	chr1	13181815	13181832	protein_coding	Ncoa2	intron	ENSMUSG00000005886	ProperStrand	26	1	-15.5374
chr3	85942713	85942758	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	2	-3.5292
chr5	143074741	143074759	protein_coding	Mmd2	intron	ENSMUSG00000039533	ProperStrand	5	chr9	15119968	15120007	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-12.4056
chr14	80262508	80262525	lincRNA	Gm6999	intron	ENSMUSG00000075495	ProperStrand	265	chr18	35716684	35716761	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-0.7529
chr9	62642689	62642720	protein_coding	Fem1b	utr3	ENSMUSG00000032244	ProperStrand	111	chr4	131866614	131866676	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	2	-12.5744
chr19	24552582	24552600	protein_coding	Pip5k1b	intron	ENSMUSG00000024867	NonProperStrand	40	chr16	23111466	23111494	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.8604
chr5	20400605	20400695	protein_coding	Rsbn1l	utr3	ENSMUSG00000039968	ProperStrand	17	chr4	131908249	131908329	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.5556
chr4	41685639	41685706	protein_coding	Sigmar1	utr3	ENSMUSG00000036078	ProperStrand	11	chr8	73419657	73419675	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-6.4238
chr1	20922259	20922275	protein_coding	Paqr8	utr5	ENSMUSG00000025931	NonProperStrand	60	chr7	118219575	118219698	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-4.1705
chr17	56444602	56448788	protein_coding	Uhrf1	exon	ENSMUSG00000001228	ProperStrand	229	chr19	8798507	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-2.7207
chr12	17552962	17553071	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr12	88778630	88778722	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	6	-2.6783
chr5	123823683	123823773	protein_coding	Bcl7a	utr3	ENSMUSG00000029438	ProperStrand	27	chr16	23111696	23111776	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-5.6525
chr4	115550717	115550733	protein_coding	Mknk1	exon	ENSMUSG00000028708	ProperStrand	4	chr5	111082719	111082737	protein_coding	Ddx51	exon	ENSMUSG00000029504	ProperStrand	54	1	-18.9580
chr4	106434699	106435060	protein_coding	Acot11	exon	ENSMUSG00000034853	ProperStrand	61	chr10	110918550	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	5	-14.6313
chr11	95867113	95867213	protein_coding	Igf2bp1	utr5	ENSMUSG00000013415	ProperStrand	140	chr11	77995189	77995255	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-4.5368
chr5	108333742	108333829	protein_coding	Rpl5	exon	ENSMUSG00000058558	ProperStrand	235	chr4	122970466	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	3	-11.2189
chr7	52381369	52381398	protein_coding	Rpl13a	exon	ENSMUSG00000074129	ProperStrand	269	chr11	97643006	97643060	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-0.9994
chr9	26812745	26813156	protein_coding	Thyn1	exon	ENSMUSG00000035443	ProperStrand	13	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-10.8335
chr1	102076754	102076793	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	chr19	8799859	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-1.5339
chr9	95525016	95525035	antisense	Gm16126	.	ENSMUSG00000086585	NonProperStrand	229	chr10	23505548	23505627	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-4.9205
chr4	8878934	8878955	LINE	Lx6	L1	chr4Lx68878651	NonProperStrand	2	chr16	23110526	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-inf
chr2	30179082	30179143	protein_coding	Nup188	exon	ENSMUSG00000052533	ProperStrand	96	chr11	33061171	33061187	protein_coding	Npm1	exon	ENSMUSG00000057113	ProperStrand	352	2	-14.0085
chr1	138382212	138382230	protein_coding	Kif14	intron	ENSMUSG00000041498	NonProperStrand	36	chr8	112363204	112363275	snoRNA	ENSMUSG00000077549_Snord71	.	ENSMUSG00000077549	ProperStrand	196	1	-11.9710
chr1	39447975	39448026	protein_coding	Tbc1d8	exon	ENSMUSG00000003134	ProperStrand	8	chr10	4817688	4817704	protein_coding	Syne1	intron	ENSMUSG00000019769	ProperStrand	49	1	-17.9732
chr2	22444477	22444982	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	chr16	23110455	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	9	-1.3744
chr3	85944554	85944610	snoRNA	ENSMUSG00000064390_Rnu73b	.	ENSMUSG00000064390	ProperStrand	164	chr1	162967488	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-1.7560
chr11	68717899	68717933	protein_coding	Rpl26	exon	ENSMUSG00000060938	ProperStrand	130	chr1	162967527	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-2.1246
chr6	140962669	140962759	SINE	B1_Mm	Alu	chr6B1_Mm140962645	NonProperStrand	1	chr5	138080238	138080328	protein_coding	Lrch4	intron	ENSMUSG00000093445	ProperStrand	16	1	-inf
chr11	70403120	70403137	protein_coding	Mink1	intron	ENSMUSG00000020827	NonProperStrand	12	chr17	35089181	35089228	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-8.7239
chr9	41931915	41932015	protein_coding	Sorl1	exon	ENSMUSG00000049313	ProperStrand	112	chr3	95980384	95980410	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-5.6283
chrX	50393496	50393586	LINE	Lx2B	L1	chrXLx2B50393482	NonProperStrand	1	chrX	50393620	50393710	SINE	RSINE1	B4	chrXRSINE150393646	ProperStrand	1	1	-inf
chr10	79457244	79457310	protein_coding	Cnn2	exon	ENSMUSG00000004665	ProperStrand	12	chr11	62270322	62270339	protein_coding	Ncor1	intron	ENSMUSG00000018501	ProperStrand	132	1	-15.0155
chrX	20259685	20259785	protein_coding	Uba1	utr3	ENSMUSG00000001924	ProperStrand	156	chr9	120038501	120038528	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.4703
chr11	60591712	60591802	protein_coding	Smcr8	exon	ENSMUSG00000049323	ProperStrand	46	chr16	23111735	23111815	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.3385
chr7	30231467	30231557	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	chr10	39978300	39978380	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-1.4903
chr1	74990061	74990078	LINE	L2	L2	chr1L274989953	NonProperStrand	2	chr19	8798485	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-inf
chr7	86839763	86839779	protein_coding	5730590G19Rik	exon	ENSMUSG00000046591	NonProperStrand	14	chr4	56910496	56910629	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	2	-14.4315
chr7	108347075	108347092	protein_coding	Fchsd2	exon	ENSMUSG00000030691	NonProperStrand	28	chr3	123210860	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	4	-11.5932
chr9	40131582	40131686	protein_coding	Gramd1b	intron	ENSMUSG00000040111	ProperStrand	40	chr3	123210878	123210933	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.7541
chr2	121759226	121759252	protein_coding	Casc4	exon	ENSMUSG00000060227	ProperStrand	18	chr9	15119646	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.8766
chr7	51505821	51505889	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	chr9	121823892	121823908	protein_coding	Cyp8b1	exon	ENSMUSG00000050445	NonProperStrand	101	1	-7.5754
chr19	46714572	46714588	protein_coding	D19Wsu162e	intron	ENSMUSG00000047731	NonProperStrand	12	chr16	90386835	90386853	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	1	-15.5161
chr10	23505539	23505570	protein_coding	Rps12	intron	ENSMUSG00000061983	ProperStrand	309	chr3	108357255	108357355	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-1.6597
chr19	23795327	23795345	protein_coding	Ptar1	utr3	ENSMUSG00000074925	ProperStrand	13	chr16	23110885	23110913	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.3283
chr15	25901587	25901647	protein_coding	Fam134b	exon	ENSMUSG00000022270	ProperStrand	18	chr2	130103752	130103825	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	4	-19.2293
chrX	166426967	166428640	protein_coding	Mid1	exon	ENSMUSG00000035299	ProperStrand	209	chr18	35716697	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-2.9344
chr14	8716347	8745479	protein_coding	Flnb	exon	ENSMUSG00000025278	ProperStrand	124	chr10	23505152	23505264	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	11	-12.8346
chr13	8766290	8766308	protein_coding	Adarb2	utr3	ENSMUSG00000052551	ProperStrand	292	chr11	62416574	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-4.0301
chr17	79254008	79254054	protein_coding	Eif2ak2	utr3	ENSMUSG00000024079	ProperStrand	11	chr3	123210854	123210933	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.2109
chr12	29316583	29316620	protein_coding	Rps7	exon	ENSMUSG00000061477	ProperStrand	129	chr2	158185585	158185653	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	4	-15.4765
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr2	122060585	122060601	protein_coding	Sord	utr5	ENSMUSG00000027227	ProperStrand	8	1	-12.9758
chr16	23111776	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	chr11	98572363	98572392	snoRNA	ENSMUSG00000088169_SNORD124	.	ENSMUSG00000088169	ProperStrand	62	1	-1.8514
chr11	68067261	68067277	protein_coding	Ntn1	intron	ENSMUSG00000020902	NonProperStrand	194	chr1	36865002	36865050	protein_coding	Tmem131	exon	ENSMUSG00000026116	ProperStrand	129	1	-9.4240
chr7	52974965	52975300	protein_coding	Rpl18	exon	ENSMUSG00000059070	ProperStrand	116	chr9	15119344	15119425	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	5	-15.8935
chr17	56257328	56257344	LTR	RLTR25B	ERVK	chr17RLTR25B56257276	NonProperStrand	75	chr1	162968461	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-5.6409
chr5	80327014	80327104	LTR	MYSERV6-int	ERVK	chr5MYSERV6-int80326656	ProperStrand	1	chr5	80327204	80327284	LTR	RMER6C	ERVK	chr5RMER6C80327163	ProperStrand	1	1	-inf
chr7	52309977	52309993	protein_coding	Prrg2	exon	ENSMUSG00000007837	NonProperStrand	281	chr19	60656618	60656697	protein_coding	2700078E11Rik	utr5	ENSMUSG00000033417	ProperStrand	12	2	-inf
chr2	32110872	32110900	protein_coding	Uck1	utr3	ENSMUSG00000002550	ProperStrand	6	chr7	116664802	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-16.7110
chr19	3612045	3612069	protein_coding	Lrp5	intron	ENSMUSG00000024913	ProperStrand	145	chr18	35716697	35716788	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-0.8959
chr4	148494141	148494157	protein_coding	Dffa	utr3	ENSMUSG00000028974	ProperStrand	55	chr16	96391544	96391613	protein_coding	Lca5l	intron	ENSMUSG00000045275	NonProperStrand	210	2	-17.2040
chr7	117189944	117189980	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	chr3	96528233	96528323	snoRNA	ENSMUSG00000065669_SNORA5	.	ENSMUSG00000065669	ProperStrand	180	8	-14.8323
chr10	122217001	122217018	protein_coding	Ppm1h	intron	ENSMUSG00000034613	ProperStrand	51	chr18	35714144	35714205	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-3.7436
chr19	24552582	24552600	protein_coding	Pip5k1b	intron	ENSMUSG00000024867	NonProperStrand	40	chr8	13416895	13416912	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-7.2609
chr9	120482742	120483336	protein_coding	Rpl14	exon	ENSMUSG00000025794	ProperStrand	123	chr15	98350162	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	2	-5.8118
chr13	14111411	14111489	protein_coding	Tbce	intron	ENSMUSG00000039233	ProperStrand	6	chr16	23110455	23110527	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-11.4714
chr2	48760556	48760572	protein_coding	Orc4	utr3	ENSMUSG00000026761	ProperStrand	95	chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	2	-9.0727
chr3	105476600	105476618	protein_coding	Kcnd3	utr3	ENSMUSG00000040896	ProperStrand	12	chr18	36885433	36885449	protein_coding	Cd14	exon	ENSMUSG00000051439	ProperStrand	65	1	-16.4440
chr4	123110551	123110602	protein_coding	Macf1	exon	ENSMUSG00000028649	ProperStrand	320	chr4	56910496	56910596	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-2.9403
chr14	20608992	20609572	protein_coding	Nid2	exon	ENSMUSG00000021806	ProperStrand	372	chr5	108334204	108334286	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	7	-12.9027
chr17	34097110	34097200	protein_coding-noncoding	Vps52	utr5	ENSMUSG00000024319	ProperStrand	1	chr17	34096874	34096954	protein_coding	Vps52	intron	ENSMUSG00000024319	ProperStrand	9	1	-inf
chr3	79263066	79335679	protein_coding	Fnip2	intron	ENSMUSG00000061175	ProperStrand	45	chr16	23110828	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-3.3094
chr4	132853345	132853390	protein_coding	Wdtc1	exon	ENSMUSG00000037622	ProperStrand	81	chr10	23505152	23505215	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-2.8526
chr7	31376908	31376925	protein_coding	Zbtb32	utr5	ENSMUSG00000006310	NonProperStrand	20	chr19	8799581	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-8.9766
chr2	151807208	151807226	LINE	Lx8	L1	chr2Lx8151807061	NonProperStrand	1	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-inf
chr17	26063990	26064071	lincRNA	Gm16278	intron	ENSMUSG00000084862	ProperStrand	2	chr2	4170975	4170993	protein_coding	Frmd4a	intron	ENSMUSG00000026657	ProperStrand	44	1	-inf
chr2	29017327	29018508	protein_coding	Setx	exon	ENSMUSG00000043535	ProperStrand	187	chr5	74489595	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	4	-7.0402
chr3	88715213	88715230	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr6	124665351	124665441	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	1	-1.4049
chr9	57575083	57575101	protein_coding	Edc3	exon	ENSMUSG00000038957	ProperStrand	19	chr9	15119631	15119708	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.7702
chr3	75451432	75451532	LTR	ORR1B2	MaLR	chr3ORR1B275451314	ProperStrand	1	chrX	71517908	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-inf
chr8	3642156	3642172	protein_coding	Stxbp2	intron	ENSMUSG00000004626	NonProperStrand	73	chr14	31990818	31990873	protein_coding	Nisch	exon	ENSMUSG00000021910	ProperStrand	125	1	-11.4450
chr8	23500340	23500371	protein_coding	Slc25a15	exon	ENSMUSG00000031482	ProperStrand	13	chr1	162965555	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-6.2408
chr19	5768548	5768585	protein_coding	Scyl1	intron	ENSMUSG00000024941	ProperStrand	59	chr5	121655016	121655097	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-6.3886
chrX	148351431	148351489	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	chr14	31827478	31827545	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	3	-7.4107
chr4	147385913	147386003	protein_coding	Clcn6	intron	ENSMUSG00000029016	ProperStrand	120	chr9	15119646	15119726	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.5126
chr13	56175686	56175726	protein_coding	H2afy	exon	ENSMUSG00000015937	ProperStrand	103	chr16	50259597	50259613	protein_coding	Bbx	intron	ENSMUSG00000022641	ProperStrand	18	1	-14.6759
chr12	21397050	21397081	protein_coding	Ywhaq	utr3	ENSMUSG00000076432	ProperStrand	70	chr16	23109042	23109090	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-6.9753
chr1	74734388	74734423	protein_coding	Ttll4	exon	ENSMUSG00000033257	ProperStrand	24	chr5	23825941	23825957	protein_coding	Kcnh2	exon	ENSMUSG00000038319	ProperStrand	242	1	-12.3724
chr16	23111801	23113803	protein_coding	Eif4a2	intron	ENSMUSG00000022884	ProperStrand	356	chr2	130101984	130102087	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	2	-3.7710
chr13	97425869	97425901	protein_coding	Hmgcr	exon	ENSMUSG00000021670	ProperStrand	56	chr7	24713726	24713742	protein_coding	Vmn1r179	exon	ENSMUSG00000046924	NonProperStrand	69	2	-20.5027
chr7	38354919	38354935	protein_coding	Zfp536	exon	ENSMUSG00000043456	NonProperStrand	236	chr5	115940332	115940379	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	1	-6.0197
chr4	132530099	132530117	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	chr2	26493423	26493499	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-0.8066
chr6	144956218	144958601	protein_coding	Bcat1	exon	ENSMUSG00000030268	ProperStrand	49	chr17	24857751	24857831	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.6426
chr14	41817467	41826972	protein_coding	5730469M10Rik	utr5	ENSMUSG00000021792	ProperStrand	4	chr3	95980376	95980410	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-12.5151
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr9	29012576	29012593	protein_coding	Ntm	intron	ENSMUSG00000059974	NonProperStrand	27	1	-9.3465
chr6	42543791	42543807	protein_coding	Fam115e	exon	ENSMUSG00000018656	NonProperStrand	64	chr19	8963027	8963081	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.1678
chr3	85652490	85652506	protein_coding	Glt28d2	intron	ENSMUSG00000031286	ProperStrand	5	chr19	8963066	8963083	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-7.1260
chr2	90235313	90235341	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	25312429	25313191	protein_coding	Clic3	exon	ENSMUSG00000015093	ProperStrand	79	1	-3.9419
chr15	89200692	89200737	protein_coding	Ncaph2	exon	ENSMUSG00000008690	ProperStrand	65	chr18	35714248	35714290	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-3.2966
chr2	68709196	68709213	protein_coding	Lass6	intron	ENSMUSG00000027035	ProperStrand	32	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-7.8466
chrX	35899956	35928336	protein_coding	Cul4b	exon	ENSMUSG00000031095	NonProperStrand	89	chr16	23111374	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	7	-8.6230
chr11	23185215	23185812	protein_coding	Xpo1	exon	ENSMUSG00000020290	ProperStrand	123	chr2	26494708	26494759	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.8879
chr17	24858242	24858652	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr15	34370551	34370631	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-0.7200
chr1	162968458	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	chr3	88497880	88497980	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-0.9780
mmu-miR-709	0	19	miRNA	mmu-miR-709	.	mmu-miR-709	ProperStrand	20	chr3	88497853	88497980	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	4	-19.3108
chr13	21874922	21875003	protein_coding	Hist1h3i	exon	ENSMUSG00000075032	ProperStrand	12	chr18	35716833	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-8.5963
chr6	38384214	38384231	protein_coding	Ubn2	exon	ENSMUSG00000038538	ProperStrand	86	chr8	112833096	112836065	protein_coding	Hydin	exon	ENSMUSG00000059854	NonProperStrand	42	1	-13.3101
chr7	13613014	13613055	protein_coding	Trim28	exon	ENSMUSG00000005566	ProperStrand	296	chr6	124691243	124691289	protein_coding	Grcc10	utr5	ENSMUSG00000072772	ProperStrand	88	2	-14.7771
chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	chr15	88994524	88994670	protein_coding	Plxnb2	exon	ENSMUSG00000036606	ProperStrand	119	1	-8.7027
chr16	89865605	89867785	protein_coding	Tiam1	exon	ENSMUSG00000002489	ProperStrand	80	chr2	26494721	26494801	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.5997
chr6	115569331	115626313	protein_coding	Raf1	utr5	ENSMUSG00000000441	ProperStrand	30	chr4	131908687	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-4.1042
chr8	122429887	122429903	SINE	B1_Mur4	Alu	chr8B1_Mur4122429833	NonProperStrand	12	chr9	15118333	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-10.7922
chr11	68886928	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	chr5	108336363	108336495	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	13	-0.7565
chr11	118267950	118268025	protein_coding	Cant1	utr3	ENSMUSG00000025575	ProperStrand	22	chr4	131908810	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.8292
chr2	57034546	57034578	lincRNA	4930555B11Rik	intron	ENSMUSG00000086396	ProperStrand	9	chr6	125231154	125231197	protein_coding	Tuba3a	exon	ENSMUSG00000067702	ProperStrand	405	1	-13.3739
chr6	125410402	125410458	protein_coding	Cd9	utr3	ENSMUSG00000030342	ProperStrand	81	chr17	34472788	34472804	protein_coding	H2-Eb2	exon	ENSMUSG00000067341	NonProperStrand	17	1	-15.2788
chr14	25673634	25673651	DNA	MER63D	AcHobo	chr14MER63D25673510	NonProperStrand	65	chr1	88247803	88247876	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-4.9419
chr2	119431639	119431724	lincRNA	1700020I14Rik	exon	ENSMUSG00000085438	ProperStrand	15	chr14	52829470	52829560	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-11.0150
chr13	9833551	9833655	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr5	108334319	108336494	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	16	-4.7802
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr2	26077094	26077179	protein_coding	Qsox2	intron	ENSMUSG00000036327	ProperStrand	24	2	-16.4359
chr6	148874670	148877052	protein_coding	Fam60a	exon	ENSMUSG00000039985	ProperStrand	68	chr8	59990734	59991415	protein_coding	Hmgb2	utr5	ENSMUSG00000054717	ProperStrand	184	1	-10.8136
chr2	11602046	11603567	protein_coding	Il2ra	exon	ENSMUSG00000026770	ProperStrand	17	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-11.1499
chr13	110670821	110670839	protein_coding	Pde4d	intron	ENSMUSG00000021699	NonProperStrand	36	chr9	61249773	61249827	protein_coding	Tle3	exon	ENSMUSG00000032280	ProperStrand	88	1	-13.5742
chr14	56159294	56159312	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	chr17	24857715	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	5	-4.7341
chr2	130103751	130103792	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	chrX	143918835	143918909	snoRNA	ENSMUSG00000084421_SNORA35	.	ENSMUSG00000084421	ProperStrand	293	2	-8.7440
chr1	154963917	154964007	protein_coding	Nmnat2	utr3	ENSMUSG00000042751	ProperStrand	39	chr7	52382752	52382832	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-7.6111
chr18	60978567	60979099	protein_coding	Tcof1	utr3	ENSMUSG00000024613	ProperStrand	68	chr18	35716685	35716765	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	11	-19.8595
chr4	153655585	153655603	protein_coding	Arhgef16	intron	ENSMUSG00000029032	NonProperStrand	1	chr8	87356378	87356458	protein_coding	Gadd45gip1	exon	ENSMUSG00000033751	ProperStrand	45	1	-inf
chr1	36200711	36278120	protein_coding	Uggt1	exon	ENSMUSG00000037470	ProperStrand	67	chr11	97642952	97643090	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	4	-8.4432
chr19	8700726	8700742	protein_coding	Slc22a6	utr3	ENSMUSG00000024650	ProperStrand	4	chr9	78326458	78326604	protein_coding	Eef1a1	utr3	ENSMUSG00000037742	ProperStrand	1990	1	-11.9831
chr2	156113677	156113713	protein_coding	Phf20	exon	ENSMUSG00000038116	ProperStrand	60	chr2	26493366	26493390	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-3.7425
chr7	51845281	51845303	lincRNA	Gm15396	intron	ENSMUSG00000087560	ProperStrand	1	chr9	78023109	78023184	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	1	-inf
chr8	89993713	89993803	protein_coding	Cbln1	utr3	ENSMUSG00000031654	ProperStrand	8	chr7	116664794	116664874	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-6.4335
chr8	46116682	46116782	protein_coding	Fat1	exon	ENSMUSG00000070047	ProperStrand	306	chr19	8799611	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-3.6272
chr9	8077496	8077574	protein_coding	AK129341	intron	ENSMUSG00000040729	ProperStrand	2	chr17	24857742	24857832	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-9.4368
chr3	116335124	116335176	protein_coding	Hiat1	utr3	ENSMUSG00000089911	ProperStrand	20	chr16	23110941	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.6223
chr10	126987319	126987718	protein_coding	Lrp1	exon	ENSMUSG00000040249	ProperStrand	151	chr6	72580006	72581029	protein_coding	Tcf7l1	exon	ENSMUSG00000055799	ProperStrand	61	1	-11.4278
chr1	182081300	182081342	protein_coding	Cdc42bpa	exon	ENSMUSG00000026490	ProperStrand	24	chr10	23505149	23505246	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-7.1107
chr2	69499141	69499231	protein_coding	Bbs5	intron	ENSMUSG00000063145	ProperStrand	11	chr16	23110838	23110993	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	9	-20.4890
chr13	96283433	96283523	protein_coding	F2rl1	exon	ENSMUSG00000021678	ProperStrand	28	chr7	29136535	29136615	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.7309
chr17	56755810	56755865	protein_coding	Lonp1	exon	ENSMUSG00000041168	ProperStrand	83	chr4	131908707	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-2.7602
chrX	152009278	152009294	protein_coding	Ptchd1	exon	ENSMUSG00000041552	NonProperStrand	294	chr18	35714144	35714257	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-0.9248
chr11	40564979	40564995	protein_coding	Ccng1	exon	ENSMUSG00000020326	ProperStrand	30	chr7	19720898	19720914	protein_coding	Fbxo46	exon	ENSMUSG00000050428	NonProperStrand	24	1	-16.5799
chr2	104494395	104495848	protein_coding	Cstf3	exon	ENSMUSG00000027176	ProperStrand	19	chr16	18226811	18227197	protein_coding	Zdhhc8	exon	ENSMUSG00000060166	ProperStrand	11	1	-18.6852
chr9	50734775	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	chr4	131865884	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.5630
chrX	19683228	19683244	protein_coding	Slc9a7	exon	ENSMUSG00000037341	NonProperStrand	136	chr17	10511873	10511927	protein_coding	Qk	utr5	ENSMUSG00000062078	ProperStrand	63	1	-11.5728
chr4	126700951	126703150	protein_coding	Sfpq	exon	ENSMUSG00000028820	ProperStrand	340	chrX	143918833	143918868	snoRNA	ENSMUSG00000084421_SNORA35	.	ENSMUSG00000084421	ProperStrand	293	1	-6.6798
chr4	122971937	122972027	protein_coding	Pabpc4	exon	ENSMUSG00000011257	ProperStrand	85	chr5	108336364	108336444	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-4.2149
chr5	74489203	74489283	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr11	6520321	6520411	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	1	-0.8531
chr8	112065767	112066296	protein_coding	Pmfbp1	exon	ENSMUSG00000031727	NonProperStrand	17	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.6984
chr8	40069012	40069112	protein_coding	Tusc3	utr5	ENSMUSG00000039530	ProperStrand	15	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-8.6538
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr1	136502339	136514615	protein_coding	Kdm5b	utr5	ENSMUSG00000042207	ProperStrand	223	9	-inf
chr8	98287259	98287327	protein_coding	Cnot1	intron	ENSMUSG00000036550	ProperStrand	315	chr1	89673555	89673645	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-0.7327
chr15	95446121	95446137	LTR	RMER19B	ERVK	chr15RMER19B95445803	ProperStrand	7	chr9	15119287	15119386	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-9.4755
chr15	34167930	34167963	protein_coding	Laptm4b	utr5	ENSMUSG00000022257	ProperStrand	24	chr4	131865855	131865925	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.3401
chr11	116938736	116938826	lincRNA	2810008D09Rik	intron	ENSMUSG00000086859	ProperStrand	6	chr9	120039582	120039662	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-7.9123
chr4	40123023	40123593	protein_coding	Aco1	exon	ENSMUSG00000028405	ProperStrand	25	chr2	26768383	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-7.3420
chr8	77742558	77742574	protein_coding	Rasd2	exon	ENSMUSG00000034472	NonProperStrand	237	chr18	35102343	35102367	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-3.9345
chr4	120225613	120226562	protein_coding	Ctps	exon	ENSMUSG00000028633	NonProperStrand	24	chr16	23111383	23111431	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.7195
chr15	77597977	77597993	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr8	113579249	113579298	protein_coding	Aars	utr3	ENSMUSG00000031960	ProperStrand	355	1	-5.2954
chr2	158451026	158451043	protein_coding	Actr5	exon	ENSMUSG00000037761	NonProperStrand	94	chr2	158182200	158182280	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	2	-6.9370
chr17	45707982	45708032	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr18	12845494	12845510	protein_coding	Ttc39c	exon	ENSMUSG00000024424	ProperStrand	10	1	-10.3743
chr12	89699698	89699714	protein_coding	Adck1	utr3	ENSMUSG00000021044	NonProperStrand	42	chr10	107800719	107800801	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	1	-8.7861
chr7	52381719	52381735	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	chr7	52381975	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-1.4900
chrX	10296062	10296128	protein_coding	Mid1ip1	utr3	ENSMUSG00000008035	ProperStrand	27	chr8	122066808	122069899	protein_coding	Mbtps1	exon	ENSMUSG00000031835	ProperStrand	81	3	-inf
chr8	124125849	124125895	protein_coding	Zcchc14	utr3	ENSMUSG00000061410	ProperStrand	22	chr1	145626114	145626192	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-10.8581
chr15	53773475	53773565	LINE	Lx2	L1	chr15Lx253773263	ProperStrand	1	chr15	53773701	53773791	LINE	Lx7	L1	chr15Lx753773669	NonProperStrand	1	1	-inf
chr4	147988651	147988668	protein_coding	Tardbp	utr3	ENSMUSG00000041459	ProperStrand	120	chr2	130101987	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-4.0285
chr13	29906223	29906242	protein_coding	Cdkal1	intron	ENSMUSG00000006191	ProperStrand	43	chr1	162965531	162965571	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.8927
chr14	19101665	19101715	protein_coding	Rpl15	exon	ENSMUSG00000012405	ProperStrand	145	chr9	120038467	120038548	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.5776
chr4	132734134	132734181	protein_coding	Wasf2	intron	ENSMUSG00000028868	ProperStrand	56	chr7	116663712	116663762	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.6307
chr8	73296711	73296790	protein_coding	Pik3r2	exon	ENSMUSG00000031834	ProperStrand	22	chr10	23505152	23505204	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.8416
chr1	191622365	191622388	protein_coding	Ptpn14	intron	ENSMUSG00000026604	ProperStrand	74	chr13	107697795	107697923	protein_coding	Ipo11	intron	ENSMUSG00000042590	ProperStrand	120	2	-18.0799
chr6	124762672	124762705	protein_coding	Tpi1	exon	ENSMUSG00000023456	ProperStrand	94	chr9	119394518	119394535	protein_coding	Scn5a	utr3	ENSMUSG00000032511	ProperStrand	19	1	-14.7305
chr11	118900007	118900023	protein_coding	Cbx8	exon	ENSMUSG00000025578	ProperStrand	95	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-4.8154
chr2	153050783	153050799	protein_coding	Tspyl3	exon	ENSMUSG00000074671	ProperStrand	228	chr11	106362556	106362586	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-4.7879
chr17	34731462	34731527	protein_coding	Pbx2	intron	ENSMUSG00000034673	ProperStrand	19	chr7	118219574	118219610	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	5	-22.0105
chr10	83057333	83057370	protein_coding	A230046K03Rik	utr3	ENSMUSG00000034560	ProperStrand	41	chr10	23505152	23505256	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.7922
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr11	77996414	77996446	protein_coding	Rpl23a	exon	ENSMUSG00000058546	ProperStrand	121	1	-5.5437
chr4	118105600	118105716	protein_coding	Cdc20	exon	ENSMUSG00000006398	ProperStrand	43	chr3	152450610	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	3	-inf
chr5	21263225	21263597	protein_coding	Dnajc2	exon	ENSMUSG00000029014	ProperStrand	31	chr7	13516163	13516211	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	1	-9.9969
chr4	131456845	131456870	protein_coding	Srsf4	exon	ENSMUSG00000028911	ProperStrand	101	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-7.5535
chr4	134733397	134733415	protein_coding	Runx3	utr3	ENSMUSG00000070691	ProperStrand	17	chr6	115757992	115758119	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-7.9927
chr2	119444553	119444573	protein_coding	Nusap1	exon	ENSMUSG00000027306	ProperStrand	11	chr3	108357255	108357391	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-7.9277
chr7	142892342	142892432	protein_coding	Mki67	exon	ENSMUSG00000031004	ProperStrand	286	chr18	73693109	73693133	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	6	-14.6916
chr16	17894461	17894477	protein_coding	Tssk1	exon	ENSMUSG00000041566	NonProperStrand	62	chr4	131908810	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-2.2896
chr15	96836311	96838857	protein_coding	Slc38a4	exon	ENSMUSG00000022464	ProperStrand	139	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	5	-3.7791
chr1	88253292	88253597	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chr2	26768368	26768387	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	2	-1.3524
chr7	86244450	86244468	protein_coding	Acan	exon	ENSMUSG00000030607	ProperStrand	38	chr17	27559700	27559717	protein_coding	Grm4	utr3	ENSMUSG00000063239	ProperStrand	147	1	-12.4377
chr16	91682824	91683025	protein_coding	Donson	exon	ENSMUSG00000022960	ProperStrand	9	chr15	79908933	79908956	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	4	-19.5546
chr11	12154004	12154063	protein_coding	Cobl	exon	ENSMUSG00000020173	ProperStrand	133	chr2	32818808	32818898	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-3.9458
chr11	67167096	67167112	protein_coding	Myh13	exon	ENSMUSG00000060180	ProperStrand	145	chr7	117190015	117190038	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-1.8259
chr1	37465359	37465459	protein_coding	Inpp4a	utr3	ENSMUSG00000026113	ProperStrand	21	chr16	23111755	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-6.3898
chr2	158205305	158205405	snoRNA	ENSMUSG00000064585_SNORA71	.	ENSMUSG00000064585	ProperStrand	418	chr4	131866609	131866676	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	1	-5.2679
chr1	139432344	139432362	LINE	Lx5	L1	chr1Lx5139429768	ProperStrand	1	chr11	6428098	6428157	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-inf
chr8	129458901	129458929	protein_coding	Tomm20	utr3	ENSMUSG00000058779	ProperStrand	55	chr18	35714144	35714256	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-3.6033
chr18	10052129	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr7	108971290	108971306	protein_coding	Inppl1	utr3	ENSMUSG00000032737	ProperStrand	272	1	-5.8061
chr10	127428422	127428438	protein_coding	Hsd17b6	exon	ENSMUSG00000025396	NonProperStrand	68	chr7	67125777	67125830	snoRNA	ENSMUSG00000089375_Snord107	.	ENSMUSG00000089375	ProperStrand	451	1	-9.0232
chr12	102956633	102956650	protein_coding	Tc2n	utr5	ENSMUSG00000021187	ProperStrand	32	chr2	9981129	9981146	protein_coding	Atp5c1	exon	ENSMUSG00000025781	ProperStrand	138	1	-12.9127
chr9	96222022	96222084	protein_coding	Tfdp2	utr3	ENSMUSG00000032411	ProperStrand	95	chr11	6428035	6428117	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	8	-20.1069
chr19	11271200	11271217	protein_coding	Ms4a13	utr5	ENSMUSG00000057240	ProperStrand	59	chr11	62416973	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-6.0762
chr13	74811133	74811150	protein_coding	Erap1	exon	ENSMUSG00000021583	NonProperStrand	3	chr6	124665421	124665521	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	1	-13.2862
chr8	125011105	125011389	protein_coding	Fam38a	exon	ENSMUSG00000014444	ProperStrand	132	chr7	117190023	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-1.9741
chr1	137347391	137347481	protein_coding	Nav1	exon	ENSMUSG00000009418	ProperStrand	38	chr11	97695471	97697441	protein_coding	Lasp1	exon	ENSMUSG00000038366	ProperStrand	65	1	-14.0775
chr11	95822933	95822963	protein_coding	Igf2bp1	utr3	ENSMUSG00000013415	ProperStrand	140	chr18	35716812	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	7	-9.5361
chr9	15069885	15069901	protein_coding	Med17	exon	ENSMUSG00000031935	ProperStrand	135	chr10	23505559	23505627	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	2	-9.6653
chr7	16865988	16866046	protein_coding	Ccdc9	exon	ENSMUSG00000041375	ProperStrand	14	chr17	35087899	35087929	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	4	-inf
chr9	95656911	95657001	protein_coding	Pls1	intron	ENSMUSG00000049493	ProperStrand	6	chr4	131865394	131865456	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-8.6503
chr11	48615569	48615609	snoRNA	ENSMUSG00000064725_Snord96a	.	ENSMUSG00000064725	ProperStrand	89	chr18	35716762	35716854	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.5511
chr9	15130748	15130803	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	chr5	147646784	147646848	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	1	-3.9681
chr14	33005214	33005241	protein_coding	Timm23	intron	ENSMUSG00000013701	ProperStrand	24	chr14	33005139	33005192	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-5.7700
chr1	164627610	164646478	protein_coding	Prrc2c	exon	ENSMUSG00000040225	ProperStrand	413	chr16	23110909	23111453	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	22	-2.4189
chr15	68012619	68012635	protein_coding	Zfat	exon	ENSMUSG00000022335	NonProperStrand	25	chr18	33954841	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-8.5519
chr2	26768049	26768107	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	chr7	52381973	52381996	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-2.1280
chr10	79003875	79003937	protein_coding	Mier2	utr3	ENSMUSG00000042570	ProperStrand	10	chr17	24857738	24857828	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-9.4148
chr14	20570602	20570690	protein_coding	Nid2	exon	ENSMUSG00000021806	ProperStrand	372	chr18	75160711	75160777	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	4	-16.9528
chrX	71060583	71060673	protein_coding	Pdzd4	intron	ENSMUSG00000002006	ProperStrand	20	chr12	106269298	106269378	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	2	-10.2469
chr16	37777391	37777408	protein_coding	Fstl1	exon	ENSMUSG00000022816	ProperStrand	179	chr3	97523349	97523365	protein_coding	Pde4dip	utr3	ENSMUSG00000038170	NonProperStrand	15	1	-13.9402
chr9	48148720	48148737	protein_coding	Fam55b	utr5	ENSMUSG00000032028	ProperStrand	25	chr9	15119693	15119766	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.2372
chr9	103401280	103401296	protein_coding	Tmem108	exon	ENSMUSG00000042757	NonProperStrand	323	chr9	120039626	120039682	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-0.7387
chr11	22872645	22872661	protein_coding-noncoding	Commd1	utr3	ENSMUSG00000051355	ProperStrand	1	chr16	11144205	11144305	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	1	-inf
chr19	45071862	45071878	protein_coding	Sema4g	exon	ENSMUSG00000025207	ProperStrand	58	chr2	26493410	26493497	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-3.8057
chr19	53082307	53082324	protein_coding	Xpnpep1	intron	ENSMUSG00000025027	NonProperStrand	58	chr14	76247791	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-4.2363
chr10	76515265	76515312	protein_coding	Col18a1	utr3	ENSMUSG00000001435	ProperStrand	287	chr11	35853255	35853271	protein_coding	Odz2	exon	ENSMUSG00000049336	ProperStrand	106	1	-9.0353
chr9	44722799	44722878	protein_coding	Atp5l	exon	ENSMUSG00000038717	ProperStrand	10	chr4	131865497	131865517	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-7.5608
chr17	88385525	88385579	protein_coding	Msh6	exon	ENSMUSG00000005370	ProperStrand	150	chr5	109058660	109058676	protein_coding	Gak	utr5	ENSMUSG00000062234	NonProperStrand	2	1	-inf
chr6	54840495	54840535	protein_coding	Znrf2	utr3	ENSMUSG00000058446	ProperStrand	13	chr19	40258325	40258342	protein_coding	Cyp2c70	intron	ENSMUSG00000060613	ProperStrand	5	1	-21.0986
chr11	119131449	119131512	protein_coding	Gaa	exon	ENSMUSG00000025579	ProperStrand	149	chr9	120038541	120038631	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.5374
chr11	19922789	19922853	protein_coding	Spred2	utr3	ENSMUSG00000045671	ProperStrand	106	chr14	76247743	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-3.1207
chr2	168043291	168043331	processed_transcript	RP23-391M18.7	.	ENSMUSG00000093752	ProperStrand	14	chr12	56592203	56592258	protein_coding	Nfkbia	exon	ENSMUSG00000021025	ProperStrand	11	1	-20.0608
chr4	151704113	151706438	protein_coding	Rpl22	exon	ENSMUSG00000028936	ProperStrand	112	chr2	26494750	26494840	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.0373
chr1	36756564	36756615	protein_coding	Actr1b	utr3	ENSMUSG00000037351	ProperStrand	14	chr4	131908689	131908728	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.6665
chr2	120357626	120357666	protein_coding	Zfp106	exon	ENSMUSG00000027288	ProperStrand	199	chr7	70612904	70612975	protein_coding	Otud7a	intron	ENSMUSG00000033510	ProperStrand	16	1	-13.5946
chr2	130103433	130103506	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	chr5	108336388	108336492	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	4	-3.3393
chr9	15119284	15119374	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	chr15	98356786	98356815	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	2	-1.2554
chr11	93816927	93817189	protein_coding	Nme2	utr5	ENSMUSG00000020857	ProperStrand	8	chr16	23110903	23110993	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.2180
chr2	130101972	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	chr11	77996558	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	9	-5.1661
chr18	35835607	35835625	protein_coding	Dnajc18	intron	ENSMUSG00000024350	ProperStrand	4	chr14	76247711	76247753	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-9.7427
chr14	31990874	31993047	protein_coding	Nisch	exon	ENSMUSG00000021910	ProperStrand	125	chr9	120038616	120038672	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-3.2978
chr10	7482609	7482626	protein_coding	Katna1	utr3	ENSMUSG00000019794	ProperStrand	14	chr5	121655099	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-6.5960
chr4	151368477	151368495	protein_coding	Phf13	intron	ENSMUSG00000047777	ProperStrand	38	chr5	121655016	121655064	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.6141
chr5	137231693	137231783	protein_coding	Emid2	intron	ENSMUSG00000004415	ProperStrand	8	chr2	158182206	158182292	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-9.0791
chr19	45101214	45101230	protein_coding	Lzts2	utr3	ENSMUSG00000035342	NonProperStrand	2	chr4	131866608	131866676	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	1	-16.6434
chr4	140995717	140995733	LTR	MER21B	ERV1	chr4MER21B140995679	ProperStrand	1	chr9	78023196	78023246	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	1	-inf
chr10	127551528	127565128	protein_coding	Baz2a	exon	ENSMUSG00000040054	ProperStrand	274	chr15	79913288	79913341	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	3	-3.4688
chr3	89047734	89047772	protein_coding	Trim46	exon	ENSMUSG00000042766	ProperStrand	2	chr11	6428075	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-10.4671
chr10	80543312	80543778	protein_coding	Thop1	exon	ENSMUSG00000004929	ProperStrand	20	chr3	88660386	88661069	protein_coding	Gon4l	exon	ENSMUSG00000054199	ProperStrand	1260	2	-14.9941
chr7	110114018	110114034	protein_coding	Olfr576	exon	ENSMUSG00000073962	NonProperStrand	79	chr19	8799582	8799628	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-6.2227
chr7	34987286	34987376	protein_coding	Gpi1	utr3	ENSMUSG00000036427	ProperStrand	288	chr10	110918553	110918633	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-0.9536
chr19	41970608	41970624	protein_coding	Rrp12	utr5	ENSMUSG00000035049	ProperStrand	106	chr11	106362556	106362626	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-6.2770
chr14	51463983	51463999	protein_coding	Tep1	exon	ENSMUSG00000006281	NonProperStrand	73	chr4	131865855	131865902	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-2.7711
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	5	-4.5223
chr9	15119631	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	chr5	147646421	147646465	snoRNA	ENSMUSG00000077185_SNORD102	.	ENSMUSG00000077185	ProperStrand	142	3	-3.8535
chr15	98604924	98606960	protein_coding	Wnt10b	exon	ENSMUSG00000022996	NonProperStrand	189	chr11	6428108	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.3194
chr18	44555634	44555651	protein_coding	Dcp2	exon	ENSMUSG00000024472	ProperStrand	44	chr9	15119722	15119768	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.1801
chr17	35972963	35973110	protein_coding	Tubb5	exon	ENSMUSG00000001525	ProperStrand	624	chrX	7141370	7141470	protein_coding	Ppp1r3f	intron	ENSMUSG00000039556	ProperStrand	23	12	-19.3775
chr1	59635737	59635756	protein_coding	Gm973	intron	ENSMUSG00000047361	ProperStrand	8	chr5	130300456	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	6	-19.9857
chr13	23831035	23831112	protein_coding	Hist1h1c	exon	ENSMUSG00000036181	ProperStrand	99	chrX	19683228	19683244	protein_coding	Slc9a7	exon	ENSMUSG00000037341	NonProperStrand	136	1	-10.6644
chr4	117317844	117317929	protein_coding	Eri3	intron	ENSMUSG00000033423	ProperStrand	246	chr10	110918593	110918683	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-1.1539
chr6	45494575	45494594	protein_coding	Cntnap2	intron	ENSMUSG00000039419	NonProperStrand	283	chr1	72272872	72272962	snRNA	ENSMUSG00000075752_U2	.	ENSMUSG00000075752	ProperStrand	535	2	-9.5294
chr12	112779158	112779278	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	chr5	108336363	108336496	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	29	-16.2040
chr3	88117209	88117480	protein_coding	Cct3	exon	ENSMUSG00000001416	ProperStrand	82	chr17	24857740	24857820	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.7919
chr14	51427119	51427219	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr9	20947631	20954203	protein_coding	Cdc37	exon	ENSMUSG00000019471	ProperStrand	97	1	-6.2581
chr4	149008958	149009343	protein_coding	Clstn1	exon	ENSMUSG00000039953	ProperStrand	173	chr8	73419655	73419707	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-2.6344
chr19	10057291	10057338	protein_coding	Fth1	utr5	ENSMUSG00000024661	ProperStrand	75	chr4	108278918	108278934	protein_coding	Orc1	exon	ENSMUSG00000028587	ProperStrand	161	2	-17.1764
chr10	68801341	68803325	protein_coding	Cdk1	exon	ENSMUSG00000019942	ProperStrand	42	chr19	9015639	9015684	protein_coding	Eml3	exon	ENSMUSG00000071647	ProperStrand	19	1	-16.3890
chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	chr11	69483136	69483195	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	4	-3.1844
chr2	162899872	162899962	protein_coding	Mybl2	intron	ENSMUSG00000017861	ProperStrand	230	chr7	117189897	117189977	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-1.1582
chr10	80949932	80949948	protein_coding	Ncln	utr3	ENSMUSG00000020238	NonProperStrand	18	chr15	4853797	4853813	protein_coding	Heatr7b2	intron	ENSMUSG00000022155	ProperStrand	2	1	-inf
chr19	8783797	8783850	protein_coding	Slc3a2	exon	ENSMUSG00000010095	ProperStrand	63	chr4	131865890	131865980	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-4.8434
chr6	113009996	113013154	protein_coding	Thumpd3	exon	ENSMUSG00000030264	ProperStrand	11	chr7	149170855	149171339	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	1	-14.7208
chr8	129469382	129469482	protein_coding	Tomm20	intron	ENSMUSG00000058779	ProperStrand	55	chr17	13112529	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-4.7470
chr7	51790053	51790071	protein_coding	Pold1	exon	ENSMUSG00000038644	ProperStrand	50	chr16	23111775	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.1991
chr11	95719519	95719535	lincRNA	Gm11527	exon	ENSMUSG00000085578	ProperStrand	1	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-inf
chr2	30005565	30005607	protein_coding	Tbc1d13	utr3	ENSMUSG00000039678	ProperStrand	24	chr3	88497852	88497975	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-9.3045
chr1	137278932	137279967	protein_coding	Ipo9	utr3	ENSMUSG00000041879	ProperStrand	53	chr7	116663637	116663717	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-4.7685
chr5	100465642	100467787	protein_coding	Hnrpdl	exon	ENSMUSG00000029328	ProperStrand	39	chr7	118219574	118219609	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	3	-11.8281
chr3	102859409	102860275	protein_coding	Csde1	exon	ENSMUSG00000068823	ProperStrand	122	chr8	73419653	73419744	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-3.4870
chr8	112576416	112576432	LINE	L1_Mus3	L1	chr8L1_Mus3112576213	ProperStrand	24	chrX	84483703	84483751	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-10.0981
chr11	68886972	68887062	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	NonProperStrand	12	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	2	-19.8359
chr15	57947313	57948324	protein_coding	Atad2	exon	ENSMUSG00000022360	ProperStrand	47	chrX	66859080	66859128	pseudogene	Gm8172	.	ENSMUSG00000082926	ProperStrand	1	1	-inf
chr3	102856741	102856798	protein_coding	Csde1	exon	ENSMUSG00000068823	ProperStrand	122	chr10	110918549	110918639	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-3.9379
chr11	11867679	11870432	protein_coding	Grb10	exon	ENSMUSG00000020176	NonProperStrand	159	chr10	127521221	127521273	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	1	-6.8537
chr5	100855893	100855973	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr2	130101985	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	6	-3.5954
chr2	157119950	157120991	protein_coding	Rpn2	exon	ENSMUSG00000027642	ProperStrand	363	chr17	13115655	13115713	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	1	-4.0304
chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr9	58049384	58049401	protein_coding	Islr2	utr5	ENSMUSG00000051243	ProperStrand	14	1	-9.3927
chr1	182261147	182261165	protein_coding	Itpkb	intron	ENSMUSG00000038855	ProperStrand	9	chr9	15118322	15118356	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-7.2077
chr17	23957257	23957369	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	chr4	4719958	4719982	protein_coding	Impad1	exon	ENSMUSG00000066324	NonProperStrand	3	1	-18.1995
chrX	132806256	132806272	protein_coding	Ngfrap1	utr3	ENSMUSG00000046432	NonProperStrand	7	chr11	6428077	6428171	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-7.4403
chr15	58767890	58767910	protein_coding	Ndufb9	exon	ENSMUSG00000022354	ProperStrand	13	chr19	8963051	8963151	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.1201
chr9	59526708	59526764	protein_coding	Pkm2	utr3	ENSMUSG00000032294	ProperStrand	1296	chr16	23109047	23109092	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-1.6209
chr16	18411321	18411351	protein_coding	Comt	exon	ENSMUSG00000000326	ProperStrand	9	chr2	152119846	152119863	protein_coding	Tbc1d20	intron	ENSMUSG00000027465	ProperStrand	27	1	-18.3327
chr19	43579408	43579425	protein_coding	Got1	intron	ENSMUSG00000025190	NonProperStrand	147	chr7	72515812	72515880	protein_coding	Tjp1	utr5	ENSMUSG00000030516	ProperStrand	78	1	-10.9872
chr3	88715214	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr2	181316563	181316579	protein_coding	Uckl1	exon	ENSMUSG00000089917	ProperStrand	142	1	-5.5366
chr9	21304733	21304805	protein_coding	Dnm2	exon	ENSMUSG00000033335	ProperStrand	48	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-3.0713
chr1	34870221	34870253	protein_coding	Fam168b	utr3	ENSMUSG00000037503	ProperStrand	23	chr16	23111451	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-4.9111
chr7	29171540	29171558	protein_coding	Med29	utr3	ENSMUSG00000003444	NonProperStrand	134	chr4	132530099	132530116	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	2	-12.7511
chr5	37206681	37206771	protein_coding	Man2b2	exon	ENSMUSG00000029119	ProperStrand	33	chr11	97642984	97643064	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-6.0430
chr4	116875158	116875248	snRNA	ENSMUSG00000070228_U5	.	ENSMUSG00000070228	ProperStrand	131	chr11	68886947	68887027	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-2.7200
chr14	61583647	61583702	protein_coding	Tnfrsf19	utr3	ENSMUSG00000060548	ProperStrand	34	chr16	23110912	23111005	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.8174
chr17	35822057	35822256	protein_coding	Ddr1	exon	ENSMUSG00000003534	ProperStrand	129	chr18	33954815	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-2.1650
chr15	82064778	82064795	protein_coding	Cenpm	utr3	ENSMUSG00000068101	NonProperStrand	3	chr11	69481335	69481422	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-15.7180
chr11	113523870	113523887	protein_coding	Cog1	utr3	ENSMUSG00000018661	ProperStrand	51	chr10	42298355	42298372	protein_coding	Nr2e1	intron	ENSMUSG00000019803	ProperStrand	32	1	-14.9224
chr5	74489214	74489294	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr8	112071964	112072054	protein_coding	Dhx38	utr3	ENSMUSG00000037993	ProperStrand	27	1	-7.2076
chr4	123136545	123136613	protein_coding	Macf1	exon	ENSMUSG00000028649	ProperStrand	320	chr9	110544350	110544366	protein_coding	Nbeal2	exon	ENSMUSG00000056724	ProperStrand	161	1	-7.9852
chr13	99079941	99079979	protein_coding	Btf3	utr3	ENSMUSG00000021660	ProperStrand	64	chr11	62416952	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-5.9161
chr17	46301196	46301213	protein_coding	Gtpbp2	exon	ENSMUSG00000023952	ProperStrand	21	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-10.7161
chr7	121459121	121459138	lincRNA	4933406I18Rik	exon	ENSMUSG00000087475	ProperStrand	2	chr11	62416975	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-13.4790
chr13	9833553	9833679	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr5	9132600	9136069	protein_coding	Dmtf1	exon	ENSMUSG00000042508	NonProperStrand	8	1	-9.0292
chr4	132100585	132100602	protein_coding	Dnajc8	exon	ENSMUSG00000054405	ProperStrand	22	chr12	106269313	106269403	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	4	-18.3547
chr6	107738191	107738208	Other	RMER1B	Other	chr6RMER1B107738112	ProperStrand	29	chr10	80078436	80078454	protein_coding	Scamp4	utr3	ENSMUSG00000078441	NonProperStrand	20	1	-16.9402
chr4	24555742	24555770	protein_coding	Klhl32	intron	ENSMUSG00000040387	ProperStrand	67	chr4	131908687	131908807	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	9	-14.8644
chr5	130299523	130299578	protein_coding	Cct6a	exon	ENSMUSG00000029447	ProperStrand	128	chr17	13112530	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	7	-19.3737
chr5	88932072	88932088	protein_coding	Enam	exon	ENSMUSG00000029286	ProperStrand	11	chr14	52829519	52829570	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-11.6607
chr13	9833579	9833668	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr4	124596008	124596088	protein_coding	Cdca8	utr3	ENSMUSG00000028873	ProperStrand	41	1	-5.6977
chr9	59516480	59516826	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr12	110923197	110923231	snoRNA	ENSMUSG00000084487_SNORD113	.	ENSMUSG00000084487	ProperStrand	183	1	-4.9910
chr2	119325656	119325746	LTR	LTRIS_Mus	ERV1	chr2LTRIS_Mus119325644	ProperStrand	1	chr2	119325489	119325569	LTR	MERVL-int	ERVL	chr2MERVL-int119325414	NonProperStrand	1	1	-inf
chr5	117815957	117816057	protein_coding-noncoding	Wsb2	utr5	ENSMUSG00000029364	ProperStrand	1	chr3	121160349	121160408	protein_coding	Cnn3	utr3	ENSMUSG00000053931	ProperStrand	77	1	-inf
chrX	20564222	20564250	LTR	ORR1A1	MaLR	chrXORR1A120564180	NonProperStrand	1	chr2	4974190	4974207	protein_coding	Optn	exon	ENSMUSG00000026672	ProperStrand	451	1	-inf
chr5	33206679	33206808	protein_coding	Depdc5	utr5	ENSMUSG00000037426	ProperStrand	26	chr2	145076804	145209252	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-9.4069
chr5	106613978	106613994	LTR	RMER19C	ERVK	chr5RMER19C106613786	NonProperStrand	12	chr17	35089181	35089231	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-8.7239
chr13	80636125	80636144	LINE	Lx8	L1	chr13Lx880635645	ProperStrand	20	chr16	23110963	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.6223
chr6	138374201	138374220	protein_coding	Lmo3	intron	ENSMUSG00000030226	ProperStrand	8	chr1	162965531	162965589	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-11.8335
chr7	144656149	144656180	protein_coding	Glrx3	exon	ENSMUSG00000031068	ProperStrand	35	chr1	162965569	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.2830
chr14	20598044	20598105	protein_coding	Nid2	exon	ENSMUSG00000021806	ProperStrand	372	chr14	47540390	47540409	protein_coding	Samd4	intron	ENSMUSG00000021838	ProperStrand	7	1	-14.0861
chr13	64469178	64469196	protein_coding	Ctsl	exon	ENSMUSG00000021477	ProperStrand	44	chr5	74489595	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-4.3638
chr12	16946804	16946894	snoRNA	ENSMUSG00000064620_SNORA32	.	ENSMUSG00000064620	ProperStrand	165	chr4	122968596	122968676	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-4.3196
chr2	172957825	172957841	antisense	1300015D01Rik	.	ENSMUSG00000087382	NonProperStrand	4	chr10	39978385	39978475	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	NonProperStrand	27	2	-inf
chr2	90235290	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	144365069	144365085	protein_coding	Sox5	intron	ENSMUSG00000041540	ProperStrand	34	2	-9.1230
chr4	69884088	69884104	protein_coding	Cdk5rap2	utr3	ENSMUSG00000039298	ProperStrand	810	chr7	52171556	52171598	protein_coding	Ap2a1	exon	ENSMUSG00000060279	ProperStrand	193	1	-5.7977
chr17	29125047	29125136	protein_coding-noncoding	Stk38	utr3	ENSMUSG00000024006	ProperStrand	2	chr2	26493366	26493393	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-11.0703
chr4	117893152	117893174	protein_coding	Ptprf	exon	ENSMUSG00000033295	ProperStrand	337	chr10	110918549	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-1.5787
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr12	100028503	100028526	protein_coding	Eml5	utr3	ENSMUSG00000051166	ProperStrand	26	1	-8.7062
chr2	90235298	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr15	101373865	101375453	protein_coding	Krt82	exon	ENSMUSG00000049548	ProperStrand	1	1	-inf
chr2	90235304	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr12	85799823	85799840	protein_coding	Lin52	intron	ENSMUSG00000085793	NonProperStrand	2	1	-11.8388
chr4	122968658	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	chr11	77996606	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	4	-2.3951
chr4	47409438	47415731	protein_coding	Tgfbr1	exon	ENSMUSG00000007613	ProperStrand	22	chr7	52382755	52382782	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	2	-13.9686
chr11	75123730	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr4	131908236	131908345	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	6	-2.2057
chr3	129235373	129340304	protein_coding	Elovl6	utr5	ENSMUSG00000041220	ProperStrand	59	chr11	98878342	98878458	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	2	-10.2398
chr4	43943351	43943367	protein_coding	Reck	intron	ENSMUSG00000028476	NonProperStrand	36	chr19	8963052	8963083	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.1678
chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	chr9	21147658	21149338	protein_coding	Slc44a2	exon	ENSMUSG00000057193	ProperStrand	26	1	-10.4511
chr1	90598741	90598757	protein_coding	Arl4c	utr5	ENSMUSG00000049866	ProperStrand	25	chr7	117166721	117166811	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	2	-10.6096
chr12	31759332	31759348	protein_coding	Fam110c	exon	ENSMUSG00000036136	ProperStrand	10	chr4	21612484	21612500	protein_coding	Prdm13	intron	ENSMUSG00000040478	NonProperStrand	4	1	-19.9092
chr19	5492624	5492671	protein_coding	Cfl1	exon	ENSMUSG00000056201	ProperStrand	88	chr3	123210913	123210970	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-4.3338
chr1	162967740	162967766	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	chr3	68889026	68889126	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-0.8737
chr13	23663275	23663324	protein_coding	Hist1h2bg	utr5	ENSMUSG00000058385	ProperStrand	29	chr7	117189893	117189933	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.7044
chr7	110602993	110603011	LTR	RMER6C	ERVK	chr7RMER6C110602852	NonProperStrand	2	chr12	92811955	92812014	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	2	-inf
chr18	14981138	14981197	protein_coding	Taf4b	intron	ENSMUSG00000054321	ProperStrand	8	chr3	153991597	153991614	protein_coding	Lhx8	utr5	ENSMUSG00000093486	NonProperStrand	47	1	-18.1801
chr12	17553973	17554089	protein_coding	Odc1	utr5	ENSMUSG00000011179	ProperStrand	173	chr11	69481370	69481460	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	6	-10.0115
chr19	9967771	9967858	protein_coding	Incenp	exon	ENSMUSG00000024660	ProperStrand	111	chr1	162968458	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	6	-inf
chr8	12757419	12757437	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr19	46079316	46079332	protein_coding	Hps6	exon	ENSMUSG00000074811	ProperStrand	56	1	-8.7313
chr7	135852622	135852679	protein_coding	Mcmbp	exon	ENSMUSG00000048170	ProperStrand	87	chr15	71624775	71624798	snoRNA	ENSMUSG00000088895_SNORA81	.	ENSMUSG00000088895	ProperStrand	348	1	-9.0463
chr13	56353200	56353217	protein_coding	Neurog1	exon	ENSMUSG00000048904	NonProperStrand	3	chr16	23110886	23110940	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr11	100756403	100757653	protein_coding	Stat3	exon	ENSMUSG00000004040	ProperStrand	20	chr7	117189864	117189944	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-8.4121
chr3	14654685	14654703	protein_coding	Car13	intron	ENSMUSG00000027555	ProperStrand	4	chr5	117581619	117581636	protein_coding	Taok3	intron	ENSMUSG00000061288	NonProperStrand	13	1	-19.7889
chr6	91636803	91636890	protein_coding	Slc6a6	intron	ENSMUSG00000030096	ProperStrand	206	chr11	98878357	98878447	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-3.9064
chr16	23110483	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	chr12	60774056	60774110	snoRNA	ENSMUSG00000077603_SNORA3	.	ENSMUSG00000077603	ProperStrand	185	1	-0.8161
chr8	73280392	73280409	protein_coding	Rab3a	exon	ENSMUSG00000031840	ProperStrand	7	chr1	59970397	59970462	protein_coding	Fam117b	exon	ENSMUSG00000041040	ProperStrand	31	1	-18.3578
chr11	58795625	58795642	protein_coding	Trim11	exon	ENSMUSG00000020455	ProperStrand	43	chr17	47840162	47840233	protein_coding	Frs3	exon	ENSMUSG00000023266	ProperStrand	11	1	-17.5080
chr9	57369056	57369136	protein_coding	Cox5a	utr5	ENSMUSG00000000088	ProperStrand	26	chr9	65972513	65972603	protein_coding	Snx1	utr5	ENSMUSG00000032382	ProperStrand	7	1	-22.6056
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr17	47129974	47130015	protein_coding	Ubr2	exon	ENSMUSG00000023977	ProperStrand	172	1	-3.8802
chrX	148864510	148864527	LINE	L1_Mus4	L1	chrXL1_Mus4148863654	ProperStrand	6	chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-12.6127
chr7	53123759	53123776	protein_coding	Grin2d	intron	ENSMUSG00000002771	ProperStrand	3	chr17	56577330	56577346	protein_coding	Ptprs	exon	ENSMUSG00000013236	ProperStrand	152	1	-17.8714
chr6	113540112	113540143	protein_coding	Fancd2	intron	ENSMUSG00000034023	ProperStrand	65	chr17	39985367	39985405	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-5.7749
chr17	53827071	53827087	protein_coding	Sgol1	exon	ENSMUSG00000023940	ProperStrand	17	chr2	91436229	91436336	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	4	-inf
chr4	62908241	62908259	protein_coding	Col27a1	intron	ENSMUSG00000045672	ProperStrand	32	chrX	34622958	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-4.3443
chr10	80296269	80296286	protein_coding	Lingo3	utr3	ENSMUSG00000051067	NonProperStrand	4	chr7	52382262	52382314	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-13.9501
chr7	134703584	134703684	protein_coding	Srcap	exon	ENSMUSG00000090663	ProperStrand	28	chr18	33954883	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-4.9550
chr17	45708441	45708722	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr8	75226775	75226792	protein_coding	Nwd1	exon	ENSMUSG00000048148	ProperStrand	46	1	-7.2588
chr1	71678650	71678710	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr1	59748828	59748857	snoRNA	ENSMUSG00000077345_Snord70	.	ENSMUSG00000077345	ProperStrand	61	1	-7.8001
chr11	69870769	69870785	protein_coding	Asgr1	exon	ENSMUSG00000020884	NonProperStrand	145	chr18	33954816	33954879	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-1.9757
chr19	44380477	44380496	protein_coding	Scd2	utr3	ENSMUSG00000025203	ProperStrand	219	chr15	79908931	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-3.0362
chr9	79914812	79914841	protein_coding	Senp6	utr5	ENSMUSG00000034252	ProperStrand	110	chr6	121423179	121423195	protein_coding	Iqsec3	utr5	ENSMUSG00000040797	NonProperStrand	139	1	-10.4095
chr13	9833553	9833652	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr15	75893270	75893308	protein_coding	Scrib	exon	ENSMUSG00000022568	ProperStrand	154	1	-3.1867
chr11	94499870	94499892	protein_coding	Lrrc59	exon	ENSMUSG00000020869	ProperStrand	115	chr17	24857740	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.2940
chr11	29636431	29636479	protein_coding	Rtn4	exon	ENSMUSG00000020458	ProperStrand	117	chr2	158185529	158185622	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-5.1777
chr2	90235299	90235326	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	7067186	7069426	protein_coding	Adcy1	exon	ENSMUSG00000020431	ProperStrand	183	1	-2.4356
chr10	5992836	5992880	protein_coding	Akap12	exon	ENSMUSG00000038587	ProperStrand	1008	chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	1	-2.7081
chr8	98227529	98227546	protein_coding	Ndrg4	intron	ENSMUSG00000036564	ProperStrand	22	chr19	8963027	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.0882
chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	chr18	73693166	73693189	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-2.1090
chr17	24858085	24858170	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr18	33954915	33954948	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-0.6946
chr5	123904524	123904559	protein_coding	Mlxip	utr3	ENSMUSG00000038342	ProperStrand	21	chr4	131908251	131908330	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.1622
chr6	70794801	70794819	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chr19	8798740	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	3	-7.7254
chr9	106091660	106091760	protein_coding	Wdr82	utr3	ENSMUSG00000020257	ProperStrand	34	chr15	79913288	79913346	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.6681
chrX	7419321	7419342	protein_coding	Otud5	exon	ENSMUSG00000031154	ProperStrand	79	chr18	35716807	35716829	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.7309
chr2	32781399	32781416	protein_coding	Lrsam1	utr3	ENSMUSG00000026792	ProperStrand	80	chr6	71832615	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-5.0510
chr12	55796767	55796784	protein_coding	Eapp	utr5	ENSMUSG00000054302	NonProperStrand	62	chr15	98350210	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-4.6974
chr19	38145581	38145661	protein_coding	Cep55	intron	ENSMUSG00000024989	ProperStrand	29	chr4	117880856	117880946	protein_coding	Ptprf	utr3	ENSMUSG00000033295	ProperStrand	337	1	-11.3247
chr11	101928775	101928792	protein_coding	Mpp2	intron	ENSMUSG00000017314	ProperStrand	3	chr11	68886975	68887036	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-10.4040
chr11	67242670	67242750	LTR	MTE2b	MaLR	chr11MTE2b67242623	NonProperStrand	1	chr11	67242889	67242979	SINE	B3	B2	chr11B367242889	ProperStrand	1	1	-inf
chr11	69795073	69797926	protein_coding	Ctdnep1	exon	ENSMUSG00000018559	ProperStrand	3	chr16	23110456	23110536	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-8.5395
chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	chr12	17552964	17553028	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-1.7536
chr2	90235298	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	135857995	135858011	protein_coding	Pom121	exon	ENSMUSG00000053293	NonProperStrand	94	3	-8.9392
chr2	3693068	3697614	protein_coding	Fam107b	utr3	ENSMUSG00000026655	NonProperStrand	15	chr5	121655100	121655144	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-10.5285
chr10	80641691	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	chr17	13115680	13115780	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	1	-2.1117
chr1	152268927	152269668	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	chr3	34550025	34550069	protein_coding	Sox2	exon	ENSMUSG00000074637	ProperStrand	299	1	-5.7265
chr2	122865810	122865900	LTR	RLTR13D2	ERVK	chr2RLTR13D2122865830	NonProperStrand	1	chr2	122865562	122865642	LTR	RMER13A	ERVK	chr2RMER13A122865079	ProperStrand	1	1	-inf
chr6	52652377	52652394	LTR	MLT1C	MaLR	chr6MLT1C52652179	ProperStrand	6	chr17	26360445	26360514	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	1	-14.7914
chr16	90777651	90810509	protein_coding	Urb1	exon	ENSMUSG00000039929	ProperStrand	71	chr16	23110456	23110581	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	4	-8.1441
chr14	76247745	76247835	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	chr12	110874224	110874290	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	1	-1.3395
chr12	111932389	111932489	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr1	88247743	88247785	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-0.8553
chr9	15119968	15120058	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	chr2	26768416	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-2.2797
chr5	75421048	75421101	protein_coding	Chic2	intron	ENSMUSG00000029229	ProperStrand	5	chr9	121547719	121547736	protein_coding	Lyzl4	intron	ENSMUSG00000032530	NonProperStrand	10	1	-19.1587
chr7	117189863	117189955	protein_coding	Ipo7	intron	ENSMUSG00000066232	NonProperStrand	9	chr16	23110828	23110857	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	NonProperStrand	93	2	-19.9462
chr9	64024549	64024567	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	chr11	62418014	62418085	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-1.2218
chr13	90238017	90238067	protein_coding	Tmem167	exon	ENSMUSG00000012422	ProperStrand	11	chr1	162965562	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-6.5834
chr6	8206111	8206127	protein_coding	Rpa3	utr3	ENSMUSG00000012483	ProperStrand	13	chr4	140121137	140121153	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	1	-14.7873
chr2	32019138	32019208	protein_coding	Prrc2b	intron	ENSMUSG00000039262	ProperStrand	344	chr17	24837876	24837892	protein_coding	Tbl3	exon	ENSMUSG00000040688	ProperStrand	42	1	-10.5329
chr4	118037670	118037735	protein_coding	Szt2	exon	ENSMUSG00000033253	ProperStrand	23	chr4	131908363	131908411	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.9964
chr7	136800631	136800649	SINE	RSINE1	B4	chr7RSINE1136800606	ProperStrand	216	chr17	39985369	39985447	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-3.4866
chr2	31325849	31330237	protein_coding	Ass1	utr5	ENSMUSG00000076441	ProperStrand	29	chr9	120038552	120038608	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-7.3534
chr2	31314678	31314768	protein_coding	Hmcn2	intron	ENSMUSG00000055632	ProperStrand	20	chr10	110918549	110918629	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	5	-inf
chr8	126441405	126441421	protein_coding	Nup133	exon	ENSMUSG00000039509	ProperStrand	59	chr17	35089182	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-5.5180
chr10	122002983	122003073	LINE	L1Md_F2	L1	chr10L1Md_F2122002095	NonProperStrand	23	chr1	6115679	6115759	LINE	L1_Mus1	L1	chr1L1_Mus16114449	NonProperStrand	1	1	-inf
chr4	137299653	137299715	protein_coding	Alpl	exon	ENSMUSG00000028766	ProperStrand	80	chr19	8963094	8963194	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.8098
chr2	155636220	155637967	protein_coding	Mmp24	exon	ENSMUSG00000027612	ProperStrand	3	chr7	147130566	147130640	protein_coding	Utf1	exon	ENSMUSG00000047751	ProperStrand	67	2	-20.2141
chr2	104653637	104653655	protein_coding	Qser1	intron	ENSMUSG00000074994	ProperStrand	22	chr18	35714144	35714258	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	NonProperStrand	47	2	-inf
chr3	86894509	86896071	protein_coding	Kirrel	exon	ENSMUSG00000041734	ProperStrand	22	chr8	73419671	73419757	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-5.0290
chr12	104574177	104576293	protein_coding	Asb2	exon	ENSMUSG00000021200	ProperStrand	3	chr4	43459842	43459884	protein_coding	Tesk1	exon	ENSMUSG00000028458	ProperStrand	5	1	-inf
chr1	172080490	172080569	protein_coding	Uap1	exon	ENSMUSG00000026670	ProperStrand	18	chr4	122968661	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-8.6998
chr6	140586264	140590758	protein_coding	Aebp2	exon	ENSMUSG00000030232	ProperStrand	34	chr16	23110892	23110972	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.8923
chrX	72214248	72214264	protein_coding-noncoding	Gab3	utr3	ENSMUSG00000032750	ProperStrand	420	chr10	80078436	80078454	protein_coding	Scamp4	utr3	ENSMUSG00000078441	NonProperStrand	20	1	-11.6420
chr2	35037785	35037885	protein_coding	Rab14	utr3	ENSMUSG00000026878	ProperStrand	21	chr3	108357255	108357293	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-6.6051
chrX	71589885	71589904	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr4	131865380	131865472	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-1.3326
chr10	7638976	7639021	protein_coding	Tab2	exon	ENSMUSG00000015755	ProperStrand	41	chr19	9052140	9052464	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	1	-10.2313
chr2	163843466	163843509	protein_coding	Ywhab	utr3	ENSMUSG00000018326	ProperStrand	33	chr4	56910550	56910618	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-7.2959
chr1	187198028	187198068	protein_coding	Eprs	exon	ENSMUSG00000026615	ProperStrand	149	chr16	23110547	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.0789
chr11	3426352	3426368	protein_coding	Smtn	exon	ENSMUSG00000020439	ProperStrand	222	chr8	34802363	34802410	snoRNA	ENSMUSG00000088856_SNORA48	.	ENSMUSG00000088856	ProperStrand	236	1	-7.9514
chr3	113793173	113797448	protein_coding	Col11a1	exon	ENSMUSG00000027966	ProperStrand	7	chr15	5068426	5068477	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-10.4600
chr17	66468410	66468428	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	chr5	23358027	23358078	snoRNA	ENSMUSG00000093321_Snord93	.	ENSMUSG00000093321	ProperStrand	218	2	-11.6757
chr11	115885015	115885050	protein_coding	H3f3b	exon	ENSMUSG00000016559	ProperStrand	76	chr9	120039640	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.8940
chr17	24295467	24299965	protein_coding	Amdhd2	exon	ENSMUSG00000036820	NonProperStrand	1	chr2	130102054	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	NonProperStrand	12	1	-inf
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr2	25915656	25915672	protein_coding	Nacc2	exon	ENSMUSG00000026932	ProperStrand	98	1	-7.7357
chr12	70284116	70285013	protein_coding	Rpl36al	utr5	ENSMUSG00000049751	ProperStrand	10	chr18	33954861	33954951	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-7.0296
chr2	90235292	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	59534008	59534026	protein_coding	Emx2	exon	ENSMUSG00000043969	NonProperStrand	87	2	-6.3547
chr7	52309977	52309993	protein_coding	Prrg2	exon	ENSMUSG00000007837	NonProperStrand	281	chr1	137662800	137662833	protein_coding	Phlda3	utr5	ENSMUSG00000041801	ProperStrand	8	1	-14.3555
chr5	111184794	111184894	protein_coding	Ep400	exon	ENSMUSG00000029505	ProperStrand	176	chr16	23110470	23110526	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-0.8738
chr8	127957157	127957178	protein_coding	Sipa1l2	exon	ENSMUSG00000001995	ProperStrand	37	chr16	23110454	23110520	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.3186
chr2	90235293	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	145688487	145688503	protein_coding	Rin2	intron	ENSMUSG00000001768	NonProperStrand	4	1	-10.0500
chr14	124353869	124353886	protein_coding	Itgbl1	exon	ENSMUSG00000032925	ProperStrand	159	chr14	52793725	52793790	protein_coding	Supt16h	exon	ENSMUSG00000035726	ProperStrand	193	1	-9.0166
chr4	147828661	147828677	protein_coding	Mtor	exon	ENSMUSG00000028991	NonProperStrand	13	chr4	131865855	131865901	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.5141
chr12	112565198	112565215	protein_coding	Cdc42bpb	intron	ENSMUSG00000021279	ProperStrand	128	chr7	52382237	52382314	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-6.7763
chr1	95303735	95303780	protein_coding	Hdlbp	utr3	ENSMUSG00000034088	ProperStrand	97	chr7	52381975	52382013	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-5.7654
chr16	17928124	17928142	protein_coding	Slc25a1	exon	ENSMUSG00000003528	ProperStrand	23	chr10	23505152	23505215	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-4.8598
chr2	181438836	181438926	LTR	RLTR15	ERVK	chr2RLTR15181438817	NonProperStrand	1	chr2	181439040	181439130	SINE	B2_Mm1t	B2	chr2B2_Mm1t181438989	ProperStrand	1	1	-inf
chr3	103548288	103548332	protein_coding	Hipk1	exon	ENSMUSG00000008730	ProperStrand	23	chr6	23546143	23546163	protein_coding	Cadps2	intron	ENSMUSG00000017978	NonProperStrand	8	1	-18.6862
chr12	45578864	45578880	protein_coding	Nrcam	intron	ENSMUSG00000020598	NonProperStrand	11	chr16	23110455	23110477	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.6740
chr14	21000505	21000585	protein_coding	Kcnk5	exon	ENSMUSG00000023243	ProperStrand	29	chr9	44143023	44143113	protein_coding	H2afx	exon	ENSMUSG00000049932	ProperStrand	137	1	-13.1267
chr11	83908169	83908193	protein_coding	Tada2a	intron	ENSMUSG00000018651	ProperStrand	32	chr10	23505152	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.1928
chr17	46685933	46685951	protein_coding	Srf	utr3	ENSMUSG00000015605	ProperStrand	11	chr17	69733459	69733476	protein_coding	Zfp161	utr5	ENSMUSG00000049672	ProperStrand	15	1	-19.7864
chr16	32822092	32822192	protein_coding	1700021K19Rik	utr3	ENSMUSG00000035629	ProperStrand	7	chr1	162965555	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-7.5326
chr14	122517025	122517049	protein_coding	Tm9sf2	intron	ENSMUSG00000025544	ProperStrand	12	chr10	23506278	23506348	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-10.2126
chr1	59539529	59539546	protein_coding	Fzd7	utr5	ENSMUSG00000041075	NonProperStrand	2	chr11	69482361	69482405	snoRNA	ENSMUSG00000089542_snoU6-77	.	ENSMUSG00000089542	ProperStrand	138	1	-inf
chr7	4959026	4960542	protein_coding	Fiz1	utr3	ENSMUSG00000061374	ProperStrand	37	chr7	29136541	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-5.5370
chr18	63238393	63238409	protein_coding	Fam38b	exon	ENSMUSG00000041482	NonProperStrand	50	chr7	117166764	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	2	-8.5088
chr16	36912820	36912842	protein_coding	Golgb1	exon	ENSMUSG00000034243	ProperStrand	92	chr11	69481341	69481479	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-2.4495
chr5	137736108	137736124	protein_coding	Ufsp1	exon	ENSMUSG00000051502	NonProperStrand	2	chr5	121655068	121655125	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-11.0755
chr17	79321889	79322628	protein_coding	Cebpz	exon	ENSMUSG00000024081	ProperStrand	14	chr4	131908687	131908745	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.6665
chr3	68838042	68838322	protein_coding	Smc4	exon	ENSMUSG00000034349	ProperStrand	21	chr3	123210854	123210983	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.9390
chr12	56013567	56013606	protein_coding	Baz1a	exon	ENSMUSG00000035021	ProperStrand	24	chr16	23110965	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.6072
chr10	122002462	122002542	LINE	L1Md_F2	L1	chr10L1Md_F2122002095	NonProperStrand	23	chr14	103534207	103534297	protein_coding	Mycbp2	intron	ENSMUSG00000033004	NonProperStrand	19	1	-17.4536
chr17	35971988	35973654	protein_coding	Tubb5	exon	ENSMUSG00000001525	ProperStrand	624	chr3	123210854	123210977	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	7	-1.1593
chr6	91702388	91704934	protein_coding	Slc6a6	exon	ENSMUSG00000030096	ProperStrand	206	chr8	87569127	87569182	protein_coding	Tnpo2	exon	ENSMUSG00000031691	ProperStrand	92	1	-9.9808
chr11	87172190	87172206	protein_coding	Ppm1e	exon	ENSMUSG00000046442	ProperStrand	112	chr16	90386834	90386853	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	1	-10.9550
chr17	4082272	4082298	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr8	73419656	73419756	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-1.3511
chr1	66741087	66741103	protein_coding	Unc80	exon	ENSMUSG00000055567	NonProperStrand	212	chr1	88247814	88247876	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-2.7516
chr8	101695818	101695908	protein_coding	Cdh8	intron	ENSMUSG00000036510	ProperStrand	12	chr3	98232596	98232686	protein_coding	Zfp697	utr3	ENSMUSG00000050064	NonProperStrand	1	1	-inf
chr5	125522198	125578322	protein_coding	Ncor2	exon	ENSMUSG00000029478	ProperStrand	377	chr2	26493389	26493479	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-1.6721
chr3	87908616	87908660	protein_coding	Iqgap3	intron	ENSMUSG00000028068	ProperStrand	16	chr4	44038356	44038372	protein_coding	Clta	exon	ENSMUSG00000028478	ProperStrand	59	1	-16.0171
chr9	108730277	108730293	protein_coding	Celsr3	exon	ENSMUSG00000023473	ProperStrand	31	chr18	73693167	73693187	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-6.8310
chr11	75303570	75303592	protein_coding	Prpf8	exon	ENSMUSG00000020850	ProperStrand	255	chr5	130300468	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	10	-11.8140
chr17	34727760	34727777	protein_coding	Gpsm3	exon	ENSMUSG00000034786	ProperStrand	12	chr9	120038466	120038514	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-6.1449
chr7	54442302	54442392	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	chr19	8800355	8800455	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	16	-20.6593
chr11	48619085	48619119	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	chr2	32818904	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-2.2428
chr4	116875189	116875249	snRNA	ENSMUSG00000070228_U5	.	ENSMUSG00000070228	ProperStrand	131	chr11	6428077	6428157	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.8635
chr5	103854392	103965880	protein_coding	Ptpn13	exon	ENSMUSG00000034573	ProperStrand	23	chrX	34622906	34623021	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	3	-11.8802
chr11	50121083	50121164	protein_coding	Canx	exon	ENSMUSG00000020368	ProperStrand	296	chr15	98350192	98350283	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	9	-19.5501
chr11	34635770	34636072	protein_coding	Ccdc99	exon	ENSMUSG00000069910	ProperStrand	8	chr16	23110967	23110984	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.2180
chr11	103098864	103098880	protein_coding	Map3k14	exon	ENSMUSG00000020941	NonProperStrand	18	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-3.3354
chr5	122162028	122162045	protein_coding	Atxn2	utr5	ENSMUSG00000042605	NonProperStrand	4	chr12	17552965	17553029	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-10.7041
chr16	54679541	54679559	LTR	MYSERV16_I-int	ERVK	chr16MYSERV16_I-int54679027	NonProperStrand	31	chr12	85350481	85350499	protein_coding	Acot1	utr5	ENSMUSG00000072949	ProperStrand	72	1	-14.2795
chr3	22014783	22014883	protein_coding	Tbl1xr1	intron	ENSMUSG00000027630	ProperStrand	44	chr7	117166829	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-5.4189
chr6	125111979	125112059	protein_coding	Gapdh	utr3	ENSMUSG00000057666	ProperStrand	356	chr11	26687736	26687828	pseudogene	Gm12070	.	ENSMUSG00000069939	ProperStrand	18	16	-19.4456
chr12	112909994	112910094	protein_coding	Ckb	exon	ENSMUSG00000001270	ProperStrand	28	chr4	53873613	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	1	-10.5834
chr9	43779686	43779706	LINE	L2b	L2	chr9L2b43779684	NonProperStrand	1	chr12	110881051	110881115	lincRNA	Rian	intron	ENSMUSG00000091793	ProperStrand	612	1	-inf
chr2	138188029	138188045	protein_coding	Btbd3	intron	ENSMUSG00000062098	NonProperStrand	121	chr5	115940330	115940406	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	1	-7.3368
chr1	132742958	132742974	protein_coding	Pigr	exon	ENSMUSG00000026417	NonProperStrand	48	chr14	84848219	84848236	protein_coding	Pcdh17	exon	ENSMUSG00000035566	NonProperStrand	2	1	-inf
chr9	61761200	61761245	protein_coding	Rplp1	exon	ENSMUSG00000007892	ProperStrand	116	chr6	121423179	121423195	protein_coding	Iqsec3	utr5	ENSMUSG00000040797	NonProperStrand	139	1	-10.3029
chr5	114201224	114202225	protein_coding	Sart3	exon	ENSMUSG00000018974	ProperStrand	50	chr4	52463907	52464116	protein_coding	Smc2	exon	ENSMUSG00000028312	ProperStrand	50	1	-14.0456
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr8	114512718	114512734	protein_coding	Adat1	intron	ENSMUSG00000031949	ProperStrand	19	1	-15.4692
chr8	3587467	3587484	protein_coding	Camsap3	utr5	ENSMUSG00000044433	NonProperStrand	1	chr11	62416954	62416974	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-inf
chr7	28146782	28146798	protein_coding	Spnb4	exon	ENSMUSG00000011751	NonProperStrand	84	chr16	5100103	5100119	protein_coding	Ppl	exon	ENSMUSG00000039457	ProperStrand	37	1	-13.6182
chr1	11190032	11190049	protein_coding	Prex2	exon	ENSMUSG00000048960	NonProperStrand	15	chr4	131908236	131908298	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.7937
chr7	134443068	134443085	protein_coding	Itgal	exon	ENSMUSG00000030830	ProperStrand	38	chr18	73693169	73693188	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-6.4249
chr9	39358287	39358304	protein_coding	Olfr958	exon	ENSMUSG00000050853	NonProperStrand	266	chr7	29136525	29136631	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	5	-3.5641
chrX	71482461	71482523	protein_coding	Flna	exon	ENSMUSG00000031328	ProperStrand	134	chr2	3443316	3443386	protein_coding	Cdnf	utr3	ENSMUSG00000039496	ProperStrand	8	2	-18.8931
mmu-miR-290a-5p	1	22	miRNA	mmu-miR-290a-5p	.	mmu-miR-290a-5p	ProperStrand	22	chr8	98269962	98270031	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-7.5392
chr14	31828788	31828839	protein_coding	Gnl3	intron	ENSMUSG00000042354	ProperStrand	53	chr2	130102058	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-5.5991
chr4	137074306	137074323	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	chr1	63225253	63225290	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	1	-3.7528
chr9	32063631	32064302	protein_coding	Arhgap32	exon	ENSMUSG00000041444	NonProperStrand	3	chr11	62416949	62417003	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-12.3795
chr3	152450610	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	chr4	148552467	148552517	protein_coding	Kif1b	utr3	ENSMUSG00000063077	ProperStrand	60	2	-13.9789
chr9	55057284	55061717	protein_coding	Fbxo22	exon	ENSMUSG00000032309	ProperStrand	79	chr9	120038496	120038551	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.5560
chr8	98390811	98393391	protein_coding	Got2	exon	ENSMUSG00000031672	ProperStrand	85	chr5	74489585	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-3.1395
chr9	43950589	43950612	protein_coding	Mcam	utr3	ENSMUSG00000032135	ProperStrand	27	chr9	15119649	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.0899
chr12	114402319	114402365	protein_coding	4930427A07Rik	utr3	ENSMUSG00000037466	ProperStrand	8	chr10	23505152	23505218	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.7871
chr17	51059909	51059926	protein_coding	Tbc1d5	exon	ENSMUSG00000023923	NonProperStrand	51	chr4	131908687	131908719	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.4523
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr10	122217001	122217018	protein_coding	Ppm1h	intron	ENSMUSG00000034613	ProperStrand	51	1	-6.2240
chr4	86501846	86502224	protein_coding	Rps6	exon	ENSMUSG00000028495	ProperStrand	263	chr19	8963027	8963201	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	5	-3.3888
chr4	155366536	155366552	protein_coding	B3galt6	exon	ENSMUSG00000050796	ProperStrand	40	chr9	15118244	15118321	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-4.2260
chr4	135566289	135566320	protein_coding	Tceb3	exon	ENSMUSG00000028668	ProperStrand	17	chr4	132394351	132394449	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	1	-11.6969
chr4	122968662	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	chr9	64143803	64143874	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	2	-2.5062
chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	chr13	45008585	45008646	protein_coding	Jarid2	exon	ENSMUSG00000038518	ProperStrand	372	1	-4.9113
chr15	23390209	23390227	protein_coding	Cdh18	exon	ENSMUSG00000040420	ProperStrand	15	chr11	62416575	62416649	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	3	-18.0861
chr1	173200741	173200758	protein_coding	B4galt3	utr5	ENSMUSG00000052423	ProperStrand	14	chr4	131908809	131908896	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.6665
chr6	115757990	115758046	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr16	18240811	18240911	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	4	-6.7336
chr17	71990787	71990855	protein_coding	Wdr43	intron	ENSMUSG00000041057	ProperStrand	70	chrX	34622906	34622945	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-2.8954
chr7	52378438	52378482	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	chr11	55296259	55296328	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-1.7864
chr2	26493383	26493483	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr17	71990928	71990999	snoRNA	ENSMUSG00000092713_CT010429.1	.	ENSMUSG00000092713	ProperStrand	182	2	-3.3221
chr4	151730301	151730737	protein_coding	Chd5	exon	ENSMUSG00000005045	NonProperStrand	147	chr5	108336363	108336408	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-3.2017
chr18	57453642	57453660	protein_coding	Megf10	exon	ENSMUSG00000024593	ProperStrand	143	chr5	144063377	144063467	protein_coding	E130309D02Rik	utr3	ENSMUSG00000039244	ProperStrand	12	1	-14.8489
chr10	80797342	80797358	protein_coding	Tbxa2r	exon	ENSMUSG00000034881	NonProperStrand	40	chr19	8800084	8800110	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-8.4204
chr19	46137273	46137350	protein_coding	Pprc1	exon	ENSMUSG00000055491	ProperStrand	143	chr5	74489598	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-2.2386
chr19	60849447	60849547	protein_coding	Eif3a	exon	ENSMUSG00000024991	ProperStrand	287	chr17	35087895	35087951	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-2.3259
chr8	74147072	74147155	protein_coding	Glt25d1	exon	ENSMUSG00000034807	ProperStrand	36	chr15	77542748	77544783	protein_coding	Apol7e	exon	ENSMUSG00000071716	NonProperStrand	1	1	-inf
chr9	63066908	63066926	protein_coding	Map2k5	intron	ENSMUSG00000058444	NonProperStrand	79	chr9	64023228	64023286	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	1	-7.8954
chr17	12585979	12585995	protein_coding	Plg	exon	ENSMUSG00000059481	ProperStrand	86	chr17	35299567	35299619	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-4.0911
chr8	86535303	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	chr10	39978407	39978485	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	2	-6.2143
chr7	53943392	53943410	protein_coding	Saal1	utr3	ENSMUSG00000006763	NonProperStrand	6	chr15	27396780	27396836	protein_coding	Ank	exon	ENSMUSG00000022265	ProperStrand	37	1	-18.1658
chr10	79493927	79493949	protein_coding	Hmha1	utr3	ENSMUSG00000035697	ProperStrand	8	chr5	116012572	116013347	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	1	-14.2880
chr19	4098567	4098657	protein_coding	Cdk2ap2	utr3	ENSMUSG00000024856	ProperStrand	2	chr16	23110911	23110991	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr19	53940393	53940409	protein_coding	Rbm20	utr3	ENSMUSG00000043639	ProperStrand	25	chr16	23110967	23110997	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.2939
chr7	107645676	107645697	protein_coding	Ucp2	exon	ENSMUSG00000033685	ProperStrand	54	chr4	131908236	131908332	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-2.9400
chr13	59932957	59932973	LINE	L1_Mur3	L1	chr13L1_Mur359932072	ProperStrand	32	chr2	26494779	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.2767
chr7	51505516	51505592	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	chr8	113362448	113362511	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	3	-11.3350
chr17	39985546	39985666	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr13	51743579	51743703	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	8	-8.7024
chr18	80633058	80633144	protein_coding	Ctdp1	intron	ENSMUSG00000033323	ProperStrand	69	chr14	76372335	76372425	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	1	-8.7106
chr9	40610545	40610570	protein_coding	Hspa8	exon	ENSMUSG00000015656	NonProperStrand	3	chr5	130300535	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	NonProperStrand	11	1	-20.0073
chr14	48345908	48345938	protein_coding	Ktn1	exon	ENSMUSG00000021843	ProperStrand	64	chr2	121010525	121010542	protein_coding	Tubgcp4	exon	ENSMUSG00000027263	NonProperStrand	4	3	-21.6063
chr3	116210896	116210949	protein_coding	Rtcd1	utr5	ENSMUSG00000000339	ProperStrand	6	chr13	68759738	68764669	protein_coding	Adcy2	exon	ENSMUSG00000021536	ProperStrand	237	2	-18.7670
chr10	114929437	114929454	protein_coding	Lgr5	intron	ENSMUSG00000020140	NonProperStrand	13	chr17	24857795	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-5.1456
chr7	13434201	13434223	protein_coding	Zfp110	exon	ENSMUSG00000058638	ProperStrand	6	chr16	23111453	23111503	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-5.4240
chr8	97099536	97099553	protein_coding	Fam192a	exon	ENSMUSG00000031774	NonProperStrand	10	chr10	23505559	23505626	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-11.2038
chr13	38437929	38437946	protein_coding	Bmp6	utr5	ENSMUSG00000039004	ProperStrand	21	chr5	121655016	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.7781
chr2	84886581	84886804	protein_coding	Ssrp1	exon	ENSMUSG00000027067	ProperStrand	118	chr2	91436269	91436336	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-6.1581
chr9	114810929	114810956	protein_coding	Gpd1l	utr3	ENSMUSG00000050627	ProperStrand	7	chr11	69483190	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-6.6014
chr3	121154866	121154903	protein_coding	Cnn3	exon	ENSMUSG00000053931	ProperStrand	77	chr2	26768061	26768118	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	1	-7.8950
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr6	120718318	120718372	protein_coding	Cecr2	utr3	ENSMUSG00000071226	ProperStrand	39	1	-9.1813
chr8	123197236	123197934	protein_coding	Cox4i1	exon	ENSMUSG00000031818	ProperStrand	31	chr11	69483134	69483224	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-6.1882
chr2	160788323	160878190	protein_coding	Chd6	exon	ENSMUSG00000057133	ProperStrand	104	chr10	23505152	23505242	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-1.2547
chr3	123334548	123334566	protein_coding	Ndst3	intron	ENSMUSG00000027977	NonProperStrand	16	chr9	120038611	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.5625
chr17	84235056	84235074	protein_coding	Haao	intron	ENSMUSG00000000673	ProperStrand	2	chr11	69483136	69483237	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-inf
chr4	43505656	43505685	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr6	89306992	89307092	protein_coding	Plxna1	exon	ENSMUSG00000030084	ProperStrand	233	1	-0.9563
chr9	75235820	75235910	protein_coding	Mapk6	utr3	ENSMUSG00000042688	ProperStrand	25	chr4	116826699	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-8.5375
chr13	9833552	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr15	3932575	3932612	protein_coding	AW549877	utr3	ENSMUSG00000041935	ProperStrand	17	3	-16.9579
chr5	100855903	100855941	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr5	137740797	137740869	protein_coding	Srrt	exon	ENSMUSG00000037364	ProperStrand	31	2	-12.7317
chr9	89992289	89995335	protein_coding	Morf4l1	exon	ENSMUSG00000062270	ProperStrand	33	chr17	24857721	24857801	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.3507
chr9	61257833	61257850	protein_coding	Tle3	exon	ENSMUSG00000032280	NonProperStrand	10	chr17	35299514	35299562	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-8.3738
chr19	8800085	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	chr15	98350209	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	3	-1.5112
chr2	32003715	32003734	LTR	RMER4A	ERVK	chr2RMER4A32003485	NonProperStrand	1	chr2	130101971	130102051	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-inf
chr4	151482007	151482107	protein_coding-noncoding	Plekhg5	utr5	ENSMUSG00000039713	ProperStrand	1	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr4	137589474	137589564	protein_coding	Eif4g3	intron	ENSMUSG00000028760	ProperStrand	42	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-7.3011
chr17	94260389	94260479	LINE	L1VL1	L1	chr17L1VL194260248	NonProperStrand	1	chr17	94260149	94260239	SINE	ID_B1	B4	chr17ID_B194260132	NonProperStrand	1	1	-inf
mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr5	23608414	23608432	protein_coding	Klhl7	intron	ENSMUSG00000028986	ProperStrand	5	1	-11.0331
chr2	144087331	144087418	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	chr1	172975116	172975189	tRNA	tRNA699-GlyGCC	.	1283623	ProperStrand	660	1	-2.0908
chr11	80415108	80415125	protein_coding	Myo1d	exon	ENSMUSG00000035441	ProperStrand	144	chr1	88252844	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-4.9279
chr17	24342579	24342596	protein_coding	Ntn3	utr3	ENSMUSG00000079662	ProperStrand	237	chr5	147646749	147646848	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	6	-20.1893
chr11	69811309	69811861	protein_coding	Phf23	exon	ENSMUSG00000018572	ProperStrand	25	chr9	15119646	15119726	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.2372
chr2	84883131	84884524	protein_coding	Ssrp1	exon	ENSMUSG00000027067	ProperStrand	118	chr7	118219574	118219613	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-2.9281
chrX	133268194	133268221	protein_coding	Morf4l2	exon	ENSMUSG00000031422	ProperStrand	113	chr3	123210853	123210889	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.1287
chr7	137908119	137908176	protein_coding	Tacc2	utr3	ENSMUSG00000030852	ProperStrand	95	chr16	23111391	23111481	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.6962
chr5	137465051	137465476	protein_coding	Plod3	exon	ENSMUSG00000004846	NonProperStrand	8	chr4	41150095	41150158	snoRNA	ENSMUSG00000089265_SNORD121A	.	ENSMUSG00000089265	ProperStrand	370	1	-13.8026
chr8	28147402	28147440	protein_coding	Erlin2	utr3	ENSMUSG00000031483	ProperStrand	14	chr16	23110970	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.2008
chr11	115432822	115432912	protein_coding	Nup85	intron	ENSMUSG00000020739	ProperStrand	33	chr11	69483136	69483194	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	4	-11.8598
chr1	187071908	187073786	protein_coding	Rab3gap2	exon	ENSMUSG00000039318	ProperStrand	41	chr7	116663735	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-5.4861
chr2	172832331	172832390	protein_coding-noncoding	Rae1	utr5	ENSMUSG00000027509	ProperStrand	2	chr17	24857767	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-9.4368
chr15	96414860	96416055	protein_coding	Slc38a1	exon	ENSMUSG00000023169	ProperStrand	69	chr3	88789537	88789617	protein_coding	Ash1l	exon	ENSMUSG00000028053	ProperStrand	30	6	-22.4220
chr2	103636787	103636804	protein_coding-noncoding	Caprin1	utr3	ENSMUSG00000027184	ProperStrand	1	chr19	8963027	8963085	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-inf
chr5	65952377	65952395	protein_coding	Ube2k	intron	ENSMUSG00000029203	ProperStrand	289	chr12	92811917	92812014	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	1	-5.4637
chr16	23111729	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	chr10	62228325	62228388	snoRNA	ENSMUSG00000080469_Snord98	.	ENSMUSG00000080469	ProperStrand	124	1	-0.8854
chr1	88253928	88254008	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chr17	24857794	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	10	-0.7163
chr2	37282666	37282707	protein_coding	Zbtb6	utr3	ENSMUSG00000066798	ProperStrand	1	chr11	69483238	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-inf
chr9	65044377	65044473	snRNA	ENSMUSG00000075763_U5	.	ENSMUSG00000075763	ProperStrand	216	chr11	68887039	68887063	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-1.8888
chr10	107677164	107677853	protein_coding	Ppp1r12a	exon	ENSMUSG00000019907	ProperStrand	65	chr5	130300418	130300498	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.3733
chr1	89105750	89105766	protein_coding	Chrng	exon	ENSMUSG00000026253	NonProperStrand	130	chr1	91358413	91358430	protein_coding	Agap1	intron	ENSMUSG00000055013	ProperStrand	229	1	-9.0776
chr6	87854934	87855208	protein_coding	Copg	exon	ENSMUSG00000030058	ProperStrand	68	chr11	6428089	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.9676
chrX	7752870	7752886	protein_coding	Tbc1d25	exon	ENSMUSG00000039201	ProperStrand	126	chr11	106874225	106874254	tRNA	tRNA945-ArgCCG	.	1900443	ProperStrand	133	1	-10.2257
chr1	75484537	75484553	protein_coding	Obsl1	exon	ENSMUSG00000026211	NonProperStrand	192	chr8	113578026	113578043	protein_coding	Aars	exon	ENSMUSG00000031960	ProperStrand	355	1	-7.4298
chr2	155439789	155439805	protein_coding	Myh7b	exon	ENSMUSG00000074652	NonProperStrand	8	chr8	73419725	73419775	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-7.0879
chr15	98604924	98606960	protein_coding	Wnt10b	exon	ENSMUSG00000022996	NonProperStrand	189	chr12	17553062	17553081	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-2.9462
chr2	150066553	150066643	LINE	Lx4A	L1	chr2Lx4A150066279	ProperStrand	6	chr9	15119647	15119709	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	6	-inf
chr5	125309188	125309204	protein_coding	Dnahc10	exon	ENSMUSG00000038011	NonProperStrand	13	chr18	35716765	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-8.3412
chr4	141230486	141230576	SINE	B2_Mm2	B2	chr4B2_Mm2141230465	ProperStrand	1	chr4	141230311	141230401	SINE	ID_B1	B4	chr4ID_B1141230227	ProperStrand	1	1	-inf
chr19	44031033	44034482	protein_coding	Cpn1	exon	ENSMUSG00000025196	ProperStrand	11	chr11	62416952	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-9.4760
chr18	36807471	36807552	protein_coding	Ankhd1	utr3	ENSMUSG00000024483	ProperStrand	56	chr8	129468842	129468879	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	4	-14.4256
chr7	29136539	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	chr1	161270414	161270434	snoRNA	ENSMUSG00000089536_Scarna3a	.	ENSMUSG00000089536	ProperStrand	247	3	-1.8080
chr9	66255883	66255899	protein_coding	Herc1	exon	ENSMUSG00000038664	NonProperStrand	35	chr19	8963053	8963083	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.2191
chr4	116827794	116827885	snoRNA	ENSMUSG00000064751_SNORD46	.	ENSMUSG00000064751	ProperStrand	132	chr17	35299553	35299633	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-3.2986
chr2	90235300	90235346	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	9047050	9047098	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	1	-1.1980
chr11	7067186	7069426	protein_coding	Adcy1	exon	ENSMUSG00000020431	ProperStrand	183	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-4.2126
chr9	84523369	84523385	LTR	MT2A	ERVL	chr9MT2A84522996	ProperStrand	8	chr15	34370637	34370679	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-7.5453
chr17	68119491	68119548	protein_coding	Lama1	intron	ENSMUSG00000032796	ProperStrand	168	chr15	5068428	5068452	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-4.0802
chr16	24984504	24984520	protein_coding	Lpp	utr3	ENSMUSG00000033306	NonProperStrand	189	chr11	6428059	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	4	-5.6098
chr17	35299529	35299609	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	chr11	83107821	83107911	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	1	-1.0038
chr11	6428054	6428173	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr14	76247713	76247843	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	103	-inf
chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	chr2	160191558	160191575	protein_coding	Mafb	exon	ENSMUSG00000074622	ProperStrand	31	1	-9.5081
chr4	43505657	43505719	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr4	124718780	124718849	protein_coding	Gnl2	intron	ENSMUSG00000028869	ProperStrand	23	6	-19.4698
chr1	187231528	187231618	protein_coding	Eprs	exon	ENSMUSG00000026615	ProperStrand	149	chr11	68886930	68887010	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-2.4984
chr5	111121066	111121174	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	chr1	162965980	162966001	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	12	-2.7236
chr1	72871219	72871319	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	chr9	15119976	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-3.5604
chr10	127788310	127789767	protein_coding	Cs	exon	ENSMUSG00000005683	ProperStrand	63	chr4	131866228	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-6.0743
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr10	60692417	60692433	protein_coding	Adamts14	exon	ENSMUSG00000059901	NonProperStrand	127	1	-6.3082
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr2	34287943	34287960	protein_coding	Mapkap1	intron	ENSMUSG00000038696	ProperStrand	64	1	-8.4637
chr5	74489229	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr7	118067838	118067855	protein_coding	Mrvi1	exon	ENSMUSG00000005611	NonProperStrand	11	1	-9.0454
chrX	147632686	147632766	pseudogene	Wnk3-ps	.	ENSMUSG00000041245	ProperStrand	21	chr19	8963062	8963152	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.1775
chr12	106038727	106042827	protein_coding	Clmn	exon	ENSMUSG00000021097	ProperStrand	50	chr10	90581037	90581137	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-5.1604
chr11	88786011	88790539	protein_coding	Scpep1	exon	ENSMUSG00000000278	ProperStrand	54	chr10	23505192	23505282	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.3802
chr10	85625119	85625139	protein_coding	Syn3	intron	ENSMUSG00000059602	ProperStrand	17	chr16	23110938	23110957	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.8783
chr5	125486846	125486862	protein_coding	Fam101a	intron	ENSMUSG00000037962	ProperStrand	9	chr16	23111375	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.5836
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr11	79887158	79887175	protein_coding	Crlf3	intron	ENSMUSG00000017561	ProperStrand	47	1	-6.3857
chr11	109683485	109683575	protein_coding	1700012B07Rik	intron	ENSMUSG00000020617	ProperStrand	1	chr2	42447851	42447941	protein_coding	Lrp1b	intron	ENSMUSG00000049252	ProperStrand	376	1	-inf
chr11	52202613	52202672	protein_coding	Vdac1	utr3	ENSMUSG00000020402	ProperStrand	107	chr4	131865884	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.9587
chr19	53082307	53082324	protein_coding	Xpnpep1	intron	ENSMUSG00000025027	NonProperStrand	58	chr7	86752549	86752601	protein_coding	Rhcg	exon	ENSMUSG00000030549	ProperStrand	1	1	-inf
chr2	145077959	145209256	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	chr13	96100595	96100693	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	1	-2.7138
chr14	73023178	73023278	protein_coding	Fndc3a	intron	ENSMUSG00000033487	ProperStrand	84	chr1	162968212	162968288	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-6.1515
chr4	124725992	124729702	protein_coding	Gnl2	exon	ENSMUSG00000028869	ProperStrand	23	chr18	73693164	73693182	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-7.4314
chr4	135846170	135846187	protein_coding	Zfp46	exon	ENSMUSG00000051351	NonProperStrand	85	chr5	115939536	115939560	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-7.1715
chr18	40409608	40409698	LINE	Lx2	L1	chr18Lx240408970	ProperStrand	1	chr3	5940876	5940956	LINE	L1_Mus4	L1	chr3L1_Mus45940324	ProperStrand	1	1	-inf
chr12	85334263	85334315	protein_coding	Acot2	utr3	ENSMUSG00000021226	ProperStrand	5	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	1	-12.1777
chr7	87606099	87606145	protein_coding	Blm	intron	ENSMUSG00000030528	ProperStrand	35	chr12	80374408	80374425	protein_coding	Zfyve26	exon	ENSMUSG00000066440	ProperStrand	44	1	-15.0298
chr4	43505688	43505788	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr19	30173445	30173462	protein_coding	Gldc	utr3	ENSMUSG00000024827	NonProperStrand	1	1	-inf
chr17	56233016	56233075	protein_coding	Hdgfrp2	exon	ENSMUSG00000002833	ProperStrand	36	chrX	113862541	113862570	snoRNA	ENSMUSG00000088518_SNORA9	.	ENSMUSG00000088518	ProperStrand	280	1	-11.2565
chr4	131865867	131865978	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr6	97112810	97112835	snoRNA	ENSMUSG00000065728_SNORA36	.	ENSMUSG00000065728	ProperStrand	158	5	-4.2336
chr7	87463900	87463966	protein_coding-noncoding	Rccd1	utr3	ENSMUSG00000038930	ProperStrand	1	chr11	69481387	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-inf
chr13	105573513	105573603	protein_coding	Cwc27	intron	ENSMUSG00000021715	ProperStrand	14	chr1	89673529	89673609	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-6.0761
chr4	43505656	43505723	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chrX	20437176	20437276	protein_coding	Araf	utr3	ENSMUSG00000001127	ProperStrand	23	1	-4.8772
chr19	9046944	9047044	protein_coding-noncoding	Eef1g	utr5	ENSMUSG00000071644	ProperStrand	7	chr2	130101263	130101310	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-10.9937
chr14	70843344	70843363	miRNA	Mir320	.	ENSMUSG00000065528	ProperStrand	6	chr18	35716685	35716786	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-6.6008
chr4	40628568	40628648	LINE	Lx9	L1	chr4Lx940628554	NonProperStrand	37	chr4	40628437	40628527	SINE	RSINE1	B4	chr4RSINE140628447	ProperStrand	37	37	-inf
chr19	42405846	42405863	protein_coding	Crtac1	intron	ENSMUSG00000042401	NonProperStrand	17	chr11	62416992	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-8.5754
chr18	46407510	46407600	protein_coding	Pggt1b	intron	ENSMUSG00000024477	ProperStrand	3	chrX	34622908	34622988	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-9.3485
chr8	18933690	18933773	protein_coding	Xkr5	exon	ENSMUSG00000039814	ProperStrand	6	chr9	15119737	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-7.1405
chr11	6519815	6519915	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	chr1	162967117	162967178	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	1	-3.4586
chr11	79969248	79969266	protein_coding	Adap2	intron	ENSMUSG00000020709	ProperStrand	1	chr12	101622378	101622419	protein_coding	Ttc7b	exon	ENSMUSG00000033530	ProperStrand	49	1	-inf
chr15	101611400	101611416	protein_coding	Krt72-ps	exon	ENSMUSG00000056605	ProperStrand	1	chr11	6428098	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	NonProperStrand	91	1	-inf
chr2	90235285	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr14	51427115	51427392	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	7	-3.7331
chr6	119028204	119028221	protein_coding	Cacna1c	intron	ENSMUSG00000051331	NonProperStrand	49	chr10	39978344	39978364	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-5.8567
chr4	139482849	139482865	lincRNA	4933427I22Rik	exon	ENSMUSG00000085928	ProperStrand	62	chr7	118219695	118219740	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-4.1085
chr8	8997016	8997032	LTR	RLTR24	ERV1	chr8RLTR248996662	ProperStrand	1	chr14	19101790	19102427	protein_coding	Rpl15	exon	ENSMUSG00000012405	ProperStrand	145	1	-inf
chr11	115970986	115971003	protein_coding	Trim47	exon	ENSMUSG00000020773	ProperStrand	14	chr4	131908809	131908896	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.6665
chr19	9047433	9047523	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	chr5	130295414	130295494	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-1.7918
chr2	125195088	125195587	protein_coding	Fbn1	exon	ENSMUSG00000027204	ProperStrand	38	chr3	123210910	123210989	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.8448
chr18	31931559	31931630	protein_coding	Ammecr1l	exon	ENSMUSG00000041915	ProperStrand	3	chr18	33954844	33954934	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-9.7168
chr17	6138911	6138928	protein_coding	Tulp4	exon	ENSMUSG00000034377	ProperStrand	164	chr19	8799829	8799893	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	2	-5.2786
chr18	35775984	35776025	protein_coding	Paip2	utr3	ENSMUSG00000037058	ProperStrand	15	chr9	120038527	120038617	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	4	-17.8163
chr19	21872546	21872628	protein_coding	Tmem2	exon	ENSMUSG00000024754	ProperStrand	133	chr14	33005117	33005207	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-2.5556
chr8	77554659	77554759	protein_coding	Hmgxb4	utr3	ENSMUSG00000034518	ProperStrand	25	chr16	23111757	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-8.6516
chr17	34255770	34255860	protein_coding	Brd2	utr5	ENSMUSG00000024335	ProperStrand	69	chr17	24856645	24856725	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-6.1512
chr11	120581394	120581411	protein_coding	Lrrc45	exon	ENSMUSG00000025145	ProperStrand	3	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.6896
chr11	71948360	71948460	protein_coding	Pitpnm3	intron	ENSMUSG00000040543	NonProperStrand	4	chr17	24857717	24857786	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-7.6570
chr1	123487033	123487112	LINE	L1VL4	L1	chr1L1VL4123486489	NonProperStrand	1	chr1	123487712	123487802	LINE	L1VL4	L1	chr1L1VL4123487460	NonProperStrand	1	1	-inf
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr10	128014040	128014057	protein_coding	Erbb3	exon	ENSMUSG00000018166	NonProperStrand	12	1	-9.1521
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chrX	165695583	165695599	protein_coding	Arhgap6	exon	ENSMUSG00000031355	ProperStrand	74	2	-8.9886
chr18	77336055	77336116	protein_coding	Pias2	exon	ENSMUSG00000025423	ProperStrand	52	chr1	102076758	102076790	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	3	-20.9180
chr9	40612833	40612923	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	chr19	8800356	8800457	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	3	-2.3064
chr7	53089954	53089976	protein_coding	Grin2d	intron	ENSMUSG00000002771	NonProperStrand	31	chr6	96322858	96322874	protein_coding	Fam19a1	intron	ENSMUSG00000059187	NonProperStrand	60	1	-14.6472
chr1	153602594	153602610	protein_coding	Edem3	utr5	ENSMUSG00000043019	ProperStrand	84	chr4	131908687	131908750	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.8029
chr7	98518802	98518818	protein_coding	Dlg2	intron	ENSMUSG00000052572	ProperStrand	33	chr4	131908811	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.1302
chr16	4077726	4077779	protein_coding	Trap1	exon	ENSMUSG00000005981	ProperStrand	25	chr3	157823663	157823679	protein_coding	Lrrc7	exon	ENSMUSG00000028176	NonProperStrand	13	1	-17.9973
chr11	45723144	45723160	protein_coding	Clint1	utr3	ENSMUSG00000006169	NonProperStrand	273	chr12	81492657	81492737	snoRNA	ENSMUSG00000088158_Scarna3b	.	ENSMUSG00000088158	ProperStrand	147	1	-8.4822
chr2	27001901	27001981	antisense	Gm13399	.	ENSMUSG00000085008	NonProperStrand	8	chrX	134450906	134450996	protein_coding	Il1rapl2	intron	ENSMUSG00000059203	ProperStrand	11	1	-18.8752
chr2	90235292	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	164257636	164257652	protein_coding	Sdc4	intron	ENSMUSG00000017009	ProperStrand	177	2	-4.3845
chr11	119353268	119360854	protein_coding	A730011L01Rik	exon	ENSMUSG00000039850	ProperStrand	25	chr4	131908328	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.8464
chr6	128193516	128196373	protein_coding	Tead4	exon	ENSMUSG00000030353	ProperStrand	14	chr10	23770362	23770378	protein_coding	Taar7f	exon	ENSMUSG00000060825	NonProperStrand	40	1	-17.1956
chr12	60774057	60774113	snoRNA	ENSMUSG00000077603_SNORA3	.	ENSMUSG00000077603	ProperStrand	185	chr18	33954820	33954916	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-2.9661
chr9	21823257	21823273	protein_coding	Elavl3	exon	ENSMUSG00000003410	NonProperStrand	137	chr11	120421865	120421901	protein_coding	P4hb	utr3	ENSMUSG00000025130	ProperStrand	83	1	-11.0034
chr19	55987110	55991853	protein_coding	Tcf7l2	exon	ENSMUSG00000024985	ProperStrand	103	chr4	131908237	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.7317
chr3	88706935	88715231	protein_coding	Gon4l	exon	ENSMUSG00000054199	ProperStrand	1260	chr19	8963027	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	13	-1.3614
chr7	26472435	26472451	protein_coding	Tgfb1	utr5	ENSMUSG00000002603	NonProperStrand	154	chr11	6428142	6428165	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.6154
chr15	12079356	12079446	protein_coding	Zfr	exon	ENSMUSG00000022201	ProperStrand	48	chr7	116663688	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-7.4806
chr12	103833784	103833874	protein_coding	Itpk1	intron	ENSMUSG00000057963	ProperStrand	47	chr4	131865872	131865952	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.1591
chr5	74489201	74489281	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr4	109144281	109144371	protein_coding	Rnf11	intron	ENSMUSG00000028557	ProperStrand	9	3	-inf
chr9	58547119	58547136	protein_coding	2410076I21Rik	intron	ENSMUSG00000074269	ProperStrand	91	chr5	108334195	108334330	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-4.0266
chr12	114200779	114201623	protein_coding	Brf1	exon	ENSMUSG00000011158	ProperStrand	20	chr4	131865948	131865986	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	15	-inf
chr8	86192637	86192655	protein_coding	Ptger1	exon	ENSMUSG00000019464	ProperStrand	6	chr13	100202866	100202915	protein_coding	Mtap1b	exon	ENSMUSG00000052727	ProperStrand	76	1	-17.4572
chr13	51196739	51196785	protein_coding	Spin1	intron	ENSMUSG00000021395	ProperStrand	56	chr6	30323291	30323391	protein_coding	Zc3hc1	exon	ENSMUSG00000039130	ProperStrand	20	1	-15.6680
chr6	8029751	8030306	protein_coding	Col28a1	exon	ENSMUSG00000068794	ProperStrand	23	chr11	69483194	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-7.0710
chr18	60936684	60936713	protein_coding	Rps14	exon	ENSMUSG00000024608	ProperStrand	154	chr7	95152837	95152860	protein_coding	Grm5	intron	ENSMUSG00000049583	NonProperStrand	145	2	-15.2430
chr1	135570946	135571026	LTR	MTE2a	MaLR	chr1MTE2a135570949	ProperStrand	1	chr1	135571308	135571398	SINE	B1F	Alu	chr1B1F135571307	ProperStrand	1	1	-inf
chr8	86775506	86775523	protein_coding	Mri1	exon	ENSMUSG00000004996	ProperStrand	9	chr8	129468746	129468799	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-8.2158
chr16	96993308	96993398	protein_coding	Dscam	intron	ENSMUSG00000050272	ProperStrand	14	chr11	6428087	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.9988
chr3	96363604	96363694	protein_coding	Txnip	exon	ENSMUSG00000038393	ProperStrand	172	chr17	13112469	13112549	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-2.6467
chr16	3750371	3750461	protein_coding	Zfp263	utr3	ENSMUSG00000022529	ProperStrand	17	chr14	55571555	55571869	protein_coding	Myh6	exon	ENSMUSG00000040752	ProperStrand	7	1	-inf
chr13	9833564	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr7	132820858	132820925	protein_coding	Gtf3c1	exon	ENSMUSG00000032777	ProperStrand	161	1	-3.1070
chr3	136404916	136404933	protein_coding	Ppp3ca	intron	ENSMUSG00000028161	ProperStrand	45	chr19	8799022	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-6.4004
chr7	26064655	26064671	protein_coding	Cic	utr5	ENSMUSG00000005442	ProperStrand	80	chr16	91270624	91270640	protein_coding	Olig1	exon	ENSMUSG00000046160	NonProperStrand	32	1	-14.0053
chr18	36885433	36885449	protein_coding	Cd14	exon	ENSMUSG00000051439	ProperStrand	65	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.6453
chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	chr15	79908931	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	2	-3.3180
chr9	120038553	120038608	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	chr14	51684839	51684882	tRNA	tRNA704-ThrTGT	.	194614	ProperStrand	30	4	-13.9951
chr13	54839525	54839544	protein_coding	Gprin1	exon	ENSMUSG00000069227	NonProperStrand	5	chr5	121655031	121655129	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	4	-inf
chr8	77617554	77617666	protein_coding	Hmox1	utr5	ENSMUSG00000005413	ProperStrand	12	chr9	64022856	64022880	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	2	-17.5262
chr2	129998665	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr16	35091471	35091502	protein_coding	Ptplb	intron	ENSMUSG00000035376	ProperStrand	17	1	-10.6636
chr17	88042955	88045492	protein_coding	Epcam	exon	ENSMUSG00000045394	ProperStrand	43	chr11	69483136	69483236	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-5.2508
mmu-miR-6240	1	23	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	2	-2.3010
chr1	40053934	40053951	protein_coding	Map4k4	exon	ENSMUSG00000026074	ProperStrand	348	chrX	84483704	84483720	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-4.7931
chr11	6519810	6519943	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	chr11	69483136	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	11	-2.7930
chr18	78014559	78016302	protein_coding	Atp5a1	exon	ENSMUSG00000025428	ProperStrand	254	chr11	6428077	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-0.9342
chr11	53109984	53110033	protein_coding	Hspa4	intron	ENSMUSG00000020361	ProperStrand	69	chr1	89673716	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	4	-10.4035
chr4	32805345	32805401	protein_coding	Mdn1	exon	ENSMUSG00000058006	ProperStrand	184	chr9	120039583	120039683	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.4566
chr11	35400743	35400761	protein_coding	Slit3	intron	ENSMUSG00000056427	ProperStrand	61	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-8.1259
chr13	56212302	56212320	protein_coding	H2afy	intron	ENSMUSG00000015937	ProperStrand	103	chr9	120037953	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-3.6848
chr2	59629924	59631227	protein_coding	Tanc1	exon	ENSMUSG00000035168	ProperStrand	80	chr16	23111706	23111796	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.4655
chr1	45069850	45069940	LINE	L1Md_F2	L1	chr1L1Md_F245069202	NonProperStrand	2	chr9	19462391	19462471	LINE	L1Md_A	L1	chr9L1Md_A19461964	NonProperStrand	28	1	-20.1779
chr9	72596306	72596360	protein_coding	Nedd4	utr3	ENSMUSG00000032216	ProperStrand	308	chr8	26879777	26879793	protein_coding	Gm17484	utr3	ENSMUSG00000091514	ProperStrand	68	1	-9.7838
chr15	79913288	79913332	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr5	116010886	116012518	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	2	-2.0382
chr9	104139902	104139921	protein_coding	Dnajc13	exon	ENSMUSG00000032560	ProperStrand	60	chr9	15119647	15119710	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.6296
chr10	18320340	18320356	protein_coding	D10Bwg1379e	exon	ENSMUSG00000019852	NonProperStrand	120	chr7	112852031	112852049	protein_coding	Dnhd1	exon	ENSMUSG00000030882	NonProperStrand	6	1	-16.6460
chr8	95355006	95355022	protein_coding	Mmp2	intron	ENSMUSG00000031740	ProperStrand	42	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-8.4542
chr19	56003755	56003771	protein_coding	Tcf7l2	intron	ENSMUSG00000024985	ProperStrand	103	chr6	47526541	47526563	protein_coding	Ezh2	exon	ENSMUSG00000029687	ProperStrand	40	1	-13.0485
chr8	26671271	26672620	protein_coding	Fgfr1	exon	ENSMUSG00000031565	ProperStrand	10	chr4	131908236	131908275	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.5892
chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	chr11	97639452	97641591	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	2	-5.6346
chr12	104770828	104770844	protein_coding	Ppp4r4	utr5	ENSMUSG00000021209	NonProperStrand	4	chr17	35384119	35384174	snoRNA	ENSMUSG00000065273_SNORD83	.	ENSMUSG00000065273	ProperStrand	244	1	-16.2173
chr3	57171070	57171088	LTR	MTD	MaLR	chr3MTD57171011	NonProperStrand	1	chr11	120440435	120440537	protein_coding	Arhgdia	utr3	ENSMUSG00000025132	ProperStrand	39	1	-inf
chr16	84727744	84727800	protein_coding	Mrpl39	exon	ENSMUSG00000022889	ProperStrand	32	chr17	24857741	24857801	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.4074
chr18	25272140	25274218	protein_coding	Fhod3	utr3	ENSMUSG00000034295	ProperStrand	23	chr7	117189962	117190052	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-8.5282
chr8	125626932	125626972	snoRNA	ENSMUSG00000064450_Snord68	.	ENSMUSG00000064450	ProperStrand	181	chr8	73419657	73419682	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-1.3315
chr10	75386410	75386448	protein_coding	Mmp11	utr3	ENSMUSG00000000901	ProperStrand	24	chr17	29388114	29388148	protein_coding	Ppil1	utr3	ENSMUSG00000024007	ProperStrand	17	1	-17.6406
chr1	182664647	182666837	protein_coding	Acbd3	exon	ENSMUSG00000026499	ProperStrand	67	chr5	54389949	54389965	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	1	-10.5598
chr7	148634664	148636931	protein_coding	Rplp2	exon	ENSMUSG00000025508	ProperStrand	106	chr11	58115973	58116017	tRNA	tRNA1911-LeuCAA	.	1204320	ProperStrand	165	1	-10.1406
chr1	181067485	181067503	protein_coding	Smyd3	intron	ENSMUSG00000055067	NonProperStrand	190	chr9	15118244	15118306	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-1.5283
chr11	97784964	97784980	protein_coding	Plxdc1	utr3	ENSMUSG00000017417	NonProperStrand	2	chr7	116664872	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-9.7350
chr5	69964623	69964640	protein_coding-noncoding	Guf1	utr5	ENSMUSG00000029208	ProperStrand	11	chr10	23505191	23505269	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-7.0732
chr16	36666047	36666063	protein_coding	Cd86	utr5	ENSMUSG00000022901	NonProperStrand	4	chr1	89673651	89673751	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	3	-inf
chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	chr11	62416598	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-1.7452
chr1	95266482	95266582	protein_coding	Ppp1r7	utr3	ENSMUSG00000026275	ProperStrand	44	chr5	147646412	147646477	snoRNA	ENSMUSG00000077185_SNORD102	.	ENSMUSG00000077185	ProperStrand	142	1	-12.2102
chr10	36718297	36718373	protein_coding	Hdac2	exon	ENSMUSG00000019777	ProperStrand	36	chr9	15119731	15119968	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.5483
chr19	8800386	8800476	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	chr16	32243862	32243942	snoRNA	ENSMUSG00000080440_SNORA79	.	ENSMUSG00000080440	ProperStrand	140	2	-3.6957
chr2	90235285	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	37013923	37013939	protein_coding	Dgki	exon	ENSMUSG00000038665	NonProperStrand	16	1	-7.0757
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	114196664	114196682	protein_coding	Sart3	exon	ENSMUSG00000018974	ProperStrand	50	1	-4.8130
mmu-miR-2137	0	21	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	chr7	17047029	17047048	protein_coding	Npas1	intron	ENSMUSG00000001988	ProperStrand	88	1	-10.7861
chr7	133592210	133592226	protein_coding	Atp2a1	exon	ENSMUSG00000030730	ProperStrand	49	chr17	39985546	39985658	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-6.3318
chr10	116499086	116499142	protein_coding	Cct2	exon	ENSMUSG00000034024	ProperStrand	100	chr11	67182895	67184426	protein_coding	Myh13	exon	ENSMUSG00000060180	ProperStrand	145	1	-10.5160
chr12	49281316	49281396	LINE	Lx2	L1	chr12Lx249281334	NonProperStrand	1	chr12	49281473	49281563	LTR	MLT1C	MaLR	chr12MLT1C49281419	NonProperStrand	1	1	-inf
chr2	50029211	50044239	protein_coding	Lypd6	exon	ENSMUSG00000050447	NonProperStrand	14	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-10.1508
chr8	97000279	97000296	lincRNA	Nlrc5	exon	ENSMUSG00000074151	NonProperStrand	25	chr14	61398407	61398423	protein_coding	C1qtnf9	exon	ENSMUSG00000071347	ProperStrand	187	1	-12.8068
chr1	15833010	15833100	protein_coding	Terf1	exon	ENSMUSG00000025925	ProperStrand	19	chr7	29136525	29136547	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	4	-14.5305
chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	chr17	35089181	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-1.7829
chr1	40079556	40079656	protein_coding	Map4k4	exon	ENSMUSG00000026074	ProperStrand	348	chr9	64023285	64023330	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	1	-4.9824
chr9	97178948	97179011	LTR	RLTR44A	ERVK	chr9RLTR44A97178901	ProperStrand	1	chr3	123210854	123210929	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-inf
chr5	120133940	120133978	protein_coding	Tbx3	utr3	ENSMUSG00000018604	ProperStrand	87	chr18	33954880	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	3	-7.3060
chr4	43505780	43505931	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr4	116875132	116875249	snRNA	ENSMUSG00000070228_U5	.	ENSMUSG00000070228	ProperStrand	131	2	-3.2246
chr11	117898650	117898750	protein_coding	Dnahc17	intron	ENSMUSG00000033987	NonProperStrand	20	chr10	23505152	23505209	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	9	-21.0552
chr6	122267320	122267360	protein_coding	M6pr	utr3	ENSMUSG00000007458	ProperStrand	56	chr16	23111721	23111837	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	6	-12.5610
chr2	130101988	130102051	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	chr10	23506278	23506342	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	2	-0.8089
chr11	70423684	70423856	protein_coding	Mink1	exon	ENSMUSG00000020827	ProperStrand	113	chr2	26493405	26493493	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	102	-inf
chr15	34454048	34454148	protein_coding	Pop1	intron	ENSMUSG00000022325	ProperStrand	19	chr16	23110823	23110874	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7016
chr11	68717888	68717938	protein_coding	Rpl26	exon	ENSMUSG00000060938	NonProperStrand	2	chr11	69483136	69483232	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	NonProperStrand	35	1	-inf
chr11	97541907	97542007	protein_coding	Mllt6	exon	ENSMUSG00000038437	ProperStrand	110	chr11	70028066	70028082	protein_coding	Slc16a11	exon	ENSMUSG00000040938	ProperStrand	5	1	-17.3037
chr1	25089255	25089345	LTR	MLT1A0	MaLR	chr1MLT1A025089260	ProperStrand	1	chr1	25088910	25088990	LTR	MLT1J	MaLR	chr1MLT1J25088805	ProperStrand	1	1	-inf
chr10	26970126	26970144	protein_coding	Lama2	intron	ENSMUSG00000019899	NonProperStrand	36	chr19	8963032	8963174	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	2	-17.5479
chr2	90235315	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	135739984	135740001	protein_coding	Plcb4	intron	ENSMUSG00000039943	ProperStrand	50	1	-4.8130
chr7	34926040	34944837	protein_coding	Uba2	utr3	ENSMUSG00000052997	ProperStrand	165	chr4	131908688	131908892	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	17	-19.5418
chr7	149170855	149171340	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	chr5	130295443	130295552	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	2	-5.6450
chr4	148632051	148632106	protein_coding	Kif1b	exon	ENSMUSG00000063077	ProperStrand	60	chr12	60141481	60141509	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-6.8293
chr10	12341172	12353751	protein_coding	Utrn	exon	ENSMUSG00000019820	ProperStrand	69	chrX	138159145	138159161	protein_coding	Irs4	exon	ENSMUSG00000054667	NonProperStrand	98	1	-12.0466
chr2	26493479	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr19	39040683	39040761	protein_coding	Hells	intron	ENSMUSG00000025001	ProperStrand	23	1	-8.1130
chr7	151765212	151765228	antisense	Gm10574	.	ENSMUSG00000073778	ProperStrand	357	chr10	127521200	127521230	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	1	-5.2711
chr14	101598569	101598586	protein_coding	1700110M21Rik	utr5	ENSMUSG00000042888	ProperStrand	2	chr11	97643010	97643061	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-9.6446
chr11	97930678	97930746	LTR	MMERVK10C-int	ERVK	chr11MMERVK10C-int97929598	ProperStrand	4	chr4	131865899	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-inf
chr2	164650658	164650758	protein_coding	Zswim1	exon	ENSMUSG00000017764	ProperStrand	68	chr16	23110510	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.2508
chr10	67560638	67561197	protein_coding	Arid5b	exon	ENSMUSG00000019947	ProperStrand	43	chr5	108334196	108334286	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	3	-12.7740
chr19	5796147	5796248	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr15	5068450	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	2	-2.0111
chr9	58829930	58830006	protein_coding	Neo1	exon	ENSMUSG00000032340	ProperStrand	35	chr4	131908715	131908805	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.0337
chr10	60895428	60895446	protein_coding	Eif4ebp2	utr3	ENSMUSG00000020091	ProperStrand	39	chr4	131908234	131908344	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-5.7444
chr9	120866200	120866246	protein_coding-noncoding	Ctnnb1	utr5	ENSMUSG00000006932	ProperStrand	1	chr9	120866993	120867729	protein_coding	Ctnnb1	exon	ENSMUSG00000006932	ProperStrand	214	1	-inf
chr7	52382234	52382315	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	chr1	162965981	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	7	-4.1697
chr12	111789238	111789255	protein_coding	Ppp2r5c	intron	ENSMUSG00000017843	NonProperStrand	16	chr10	80642408	80642452	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-8.7566
chr2	160578225	160578264	protein_coding	Plcg1	exon	ENSMUSG00000016933	ProperStrand	65	chr4	131908688	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.1169
chr15	36903685	36903702	LTR	MLT1J	MaLR	chr15MLT1J36903613	ProperStrand	2	chr8	108379051	108379095	protein_coding	Thap11	utr5	ENSMUSG00000036442	ProperStrand	34	2	-inf
chr12	77384984	77385030	protein_coding	Mthfd1	exon	ENSMUSG00000021048	ProperStrand	71	chr17	24857721	24857742	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-3.6516
chr12	110892840	110892904	snoRNA	ENSMUSG00000064621_AF357355	.	ENSMUSG00000064621	ProperStrand	60	chr19	8799582	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-6.7666
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr12	86610078	86610094	protein_coding	Mlh3	exon	ENSMUSG00000021245	ProperStrand	28	1	-12.9101
chr15	91718587	91718603	protein_coding	Muc19	exon	ENSMUSG00000044021	ProperStrand	3	chr14	56215090	56215238	protein_coding	Rnf31	utr5	ENSMUSG00000047098	ProperStrand	17	1	-inf
chr15	79748408	79748459	protein_coding	Cbx7	utr3	ENSMUSG00000053411	ProperStrand	62	chr10	23505148	23505282	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-2.3053
chr6	29508810	29510147	protein_coding	Tnpo3	exon	ENSMUSG00000012535	ProperStrand	58	chr7	148634804	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-4.0499
chr13	81030440	81030803	protein_coding	Arrdc3	exon	ENSMUSG00000074794	ProperStrand	6	chr16	23110986	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.7876
chr4	43505770	43505860	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr2	49012341	49012363	protein_coding	Mbd5	intron	ENSMUSG00000036792	ProperStrand	15	2	-9.4277
chr19	10974722	10974812	protein_coding	Prpf19	intron	ENSMUSG00000024735	ProperStrand	75	chr4	131908362	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.1121
chr7	108835819	108835878	protein_coding	Clpb	utr5	ENSMUSG00000001829	ProperStrand	44	chr2	153050783	153050799	protein_coding	Tspyl3	exon	ENSMUSG00000074671	ProperStrand	228	1	-11.2618
chr6	131337993	131338009	protein_coding	Csda	intron	ENSMUSG00000030189	ProperStrand	86	chr16	23110465	23110491	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.8703
chr7	86609713	86609788	protein_coding	Polg	exon	ENSMUSG00000039176	NonProperStrand	3	chr18	33954875	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	NonProperStrand	24	1	-inf
chr12	85017061	85018835	protein_coding	Rbm25	exon	ENSMUSG00000010608	ProperStrand	42	chr11	116535914	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	1	-6.6162
chr16	5100103	5100119	protein_coding	Ppl	exon	ENSMUSG00000039457	ProperStrand	37	chr16	23110886	23110940	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.7935
chr4	137520854	137520945	protein_coding	Ece1	utr3	ENSMUSG00000057530	ProperStrand	982	chr11	74718962	74719009	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	1	-3.5780
chr5	118376503	118376519	protein_coding	Nos1	exon	ENSMUSG00000029361	NonProperStrand	237	chr9	120039565	120039584	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.1090
chr2	80701930	80701947	pseudogene	Gm13700	.	ENSMUSG00000084107	ProperStrand	1	chr9	15119631	15119714	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-inf
chr2	90235315	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	112202959	112202975	protein_coding	Slc12a6	utr3	ENSMUSG00000027130	NonProperStrand	72	1	-4.1164
chr3	141746434	141746450	protein_coding	Bmpr1b	intron	ENSMUSG00000052430	NonProperStrand	12	chr8	113447030	113447163	snoRNA	ENSMUSG00000065100_SNORA57	.	ENSMUSG00000065100	ProperStrand	81	3	-inf
chr3	40564296	40564312	protein_coding	Hspa4l	exon	ENSMUSG00000025757	NonProperStrand	10	chr17	35299507	35299599	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	3	-18.5019
chrX	120217486	120217503	protein_coding	3110007F17Rik	intron	ENSMUSG00000079450	NonProperStrand	18	chr1	89681332	89681396	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-7.8442
chr10	122513230	122513247	protein_coding	Mon2	utr5	ENSMUSG00000034602	ProperStrand	28	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-7.3840
chr1	31260593	31260609	protein_coding	Lgsn	exon	ENSMUSG00000050217	ProperStrand	20	chr17	24665420	24665466	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-7.1170
chr6	125431025	125431060	protein_coding	Cd9	intron	ENSMUSG00000030342	ProperStrand	81	chr10	110918551	110918641	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-5.0401
chr1	112972762	112972783	LTR	MTD	MaLR	chr1MTD112972591	NonProperStrand	1	chr16	23110955	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr1	24619387	24619456	protein_coding	Gm10222	exon	ENSMUSG00000067736	ProperStrand	42	chr5	74489595	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	4	-14.2373
chr17	34057342	34057432	protein_coding	Tapbp	exon	ENSMUSG00000024308	ProperStrand	14	chr19	8963096	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.9719
chr3	85448965	85456213	protein_coding	Pet112l	exon	ENSMUSG00000028085	ProperStrand	81	chr19	25392811	25392833	protein_coding	Kank1	utr5	ENSMUSG00000032702	ProperStrand	218	1	-10.1230
chr18	6201609	6201637	protein_coding	Kif5b	utr3	ENSMUSG00000006740	ProperStrand	65	chr2	32818837	32818927	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-5.3146
chr2	91436228	91436335	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	chr3	68889026	68889363	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	6	-1.0733
chr3	88117253	88117481	protein_coding	Cct3	exon	ENSMUSG00000001416	ProperStrand	82	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-6.3644
chr9	93516561	93516651	LINE	L1_Mus1	L1	chr9L1_Mus193515194	NonProperStrand	1	chr9	80130334	80130414	protein_coding	Myo6	intron	ENSMUSG00000033577	ProperStrand	29	1	-inf
chr16	45620182	45620198	protein_coding	Gcet2	exon	ENSMUSG00000022659	NonProperStrand	39	chr16	23110454	23110477	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.2225
chr10	42894035	42894051	protein_coding	Sobp	utr5	ENSMUSG00000038248	NonProperStrand	25	chr1	162965980	162965999	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-5.2802
chr13	59749530	59749548	protein_coding	Golm1	intron	ENSMUSG00000021556	ProperStrand	27	chr7	117166806	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-6.3852
chr11	60608389	60624567	protein_coding	Shmt1	exon	ENSMUSG00000020534	ProperStrand	60	chr16	23110857	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-0.7998
chr13	97253385	97253475	protein_coding	Polk	utr3	ENSMUSG00000021668	ProperStrand	16	chr5	36833528	36833608	protein_coding	Tbc1d14	utr3	ENSMUSG00000029192	ProperStrand	25	1	-17.5947
chr1	53313505	53313548	protein_coding	Pms1	exon	ENSMUSG00000026098	ProperStrand	16	chr4	131908236	131908313	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.6705
chr1	172248699	172248717	protein_coding	Nos1ap	exon	ENSMUSG00000038473	ProperStrand	5	chr2	30006636	30006667	protein_coding	Tbc1d13	utr3	ENSMUSG00000039678	ProperStrand	24	1	-18.9154
chr18	73693110	73693187	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr12	17552949	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	8	-1.9939
chr7	26018858	26018911	protein_coding	Gsk3a	exon	ENSMUSG00000057177	ProperStrand	14	chr17	35299543	35299633	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-7.6757
chr8	124406373	124406411	protein_coding	Slc7a5	utr3	ENSMUSG00000040010	ProperStrand	166	chr11	97642952	97643028	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-0.9509
chr3	104637030	104637652	protein_coding	Capza1	exon	ENSMUSG00000070372	ProperStrand	42	chr17	24857717	24857807	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.9140
chr19	44188531	44188613	snoRNA	ENSMUSG00000077391_SNORA12	.	ENSMUSG00000077391	ProperStrand	506	chr1	89673696	89673786	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	2	-0.7324
chrX	162847449	162847502	protein_coding	Ofd1	exon	ENSMUSG00000040586	ProperStrand	8	chr7	116663748	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-15.1552
chrX	68513818	68513834	protein_coding	Mtm1	utr3	ENSMUSG00000031337	NonProperStrand	10	chr9	114640457	114640477	protein_coding	Cmtm6	exon	ENSMUSG00000032434	ProperStrand	24	1	-19.3824
chr10	39974190	39974206	protein_coding	Gtf3c6	intron	ENSMUSG00000019837	ProperStrand	4	chr1	162966813	162966843	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-11.9060
chr18	53577519	53577535	protein_coding	Ppic	exon	ENSMUSG00000024538	NonProperStrand	4	chr11	62416578	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-10.7841
chrX	158279809	158279829	protein_coding	Nhs	exon	ENSMUSG00000059493	ProperStrand	16	chr4	131865929	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.1079
chr1	193730797	193730813	protein_coding	Slc30a1	utr5	ENSMUSG00000037434	ProperStrand	42	chr15	79908931	79908956	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-6.1743
chr5	112758435	112758451	protein_coding	Tfip11	exon	ENSMUSG00000029345	ProperStrand	111	chr9	120038610	120038642	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.9906
chr15	3722437	3722455	LINE	Lx4B	L1	chr15Lx4B3722405	ProperStrand	16	chr2	130101241	130101263	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-9.2562
chr11	116216788	116219997	protein_coding	Rnf157	exon	ENSMUSG00000052949	ProperStrand	32	chr19	8800377	8800467	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	7	-20.9051
chr11	70482720	70482753	protein_coding	Spag7	exon	ENSMUSG00000018287	ProperStrand	6	chr19	8798738	8798776	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-9.4911
chr16	91818789	91818807	protein_coding	Atp5o	intron	ENSMUSG00000022956	ProperStrand	37	chr5	74489541	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-4.6969
chr17	75578475	75578491	protein_coding	Ltbp1	exon	ENSMUSG00000001870	ProperStrand	136	chr14	33005038	33005091	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-2.5175
chr4	154624313	154624335	protein_coding	2610002J02Rik	utr5	ENSMUSG00000073684	ProperStrand	18	chrX	34622991	34623039	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-5.4705
chr7	129059283	129060041	protein_coding	Scnn1b	exon	ENSMUSG00000030873	ProperStrand	26	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-13.3784
chr13	23647192	23647272	protein_coding	Hist1h1d	exon	ENSMUSG00000052565	ProperStrand	78	chr7	109789611	109789627	protein_coding	Olfr554	exon	ENSMUSG00000073971	NonProperStrand	66	1	-12.5952
chr1	107743300	107743317	protein_coding	Tnfrsf11a	utr3	ENSMUSG00000026321	NonProperStrand	100	chr11	69481367	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	3	-6.1760
chr1	181733870	181733886	protein_coding	Gm10518	exon	ENSMUSG00000073486	NonProperStrand	5	chr1	88252879	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-11.7839
chrX	70237450	70237471	miRNA	Mir2137	.	ENSMUSG00000089357	ProperStrand	50	chr7	17040701	17040717	protein_coding	Tmem160	exon	ENSMUSG00000019158	ProperStrand	55	1	-13.8561
chr1	24039158	24039225	protein_coding	Fam135a	intron	ENSMUSG00000026153	ProperStrand	8	chr16	23111779	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.6662
chr5	34959384	34959411	protein_coding	Add1	exon	ENSMUSG00000029106	ProperStrand	88	chr4	112929378	112929396	protein_coding	Skint6	intron	ENSMUSG00000087194	NonProperStrand	35	1	-13.6325
chr8	48373253	48373269	protein_coding	Stox2	exon	ENSMUSG00000038143	NonProperStrand	10	chr11	97643000	97643090	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-5.8808
chr15	75758904	75758939	protein_coding	Tsta3	exon	ENSMUSG00000022570	ProperStrand	38	chr18	33954863	33954953	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-7.2959
chr2	166860281	166860366	protein_coding	Ddx27	utr3	ENSMUSG00000017999	ProperStrand	55	chr17	13112468	13112558	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-4.7470
chr9	58829930	58830006	protein_coding	Neo1	exon	ENSMUSG00000032340	ProperStrand	35	chr9	120038608	120038672	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.0343
chr5	34234244	34234262	protein_coding	Whsc1	utr5	ENSMUSG00000057406	ProperStrand	409	chr17	24856620	24856762	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	7	-18.4290
chr19	59335933	59337435	protein_coding	Slc18a2	exon	ENSMUSG00000025094	ProperStrand	11	chr9	15118325	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-6.7899
chr5	148113281	148113297	protein_coding	Cdx2	utr3	ENSMUSG00000029646	ProperStrand	276	chr11	106362556	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	2	-7.3540
chr2	126893464	126893554	protein_coding	Ap4e1	utr3	ENSMUSG00000001998	ProperStrand	7	chr7	29136058	29137221	protein_coding	Rps16	exon	ENSMUSG00000037563	ProperStrand	191	1	-15.4229
chr2	70517590	70520973	protein_coding	Gorasp2	exon	ENSMUSG00000014959	ProperStrand	21	chr14	19522019	19522039	protein_coding	Ube2e2	intron	ENSMUSG00000058317	ProperStrand	5	1	-19.3637
chr2	168055620	168055637	processed_transcript	RP23-391M18.7	.	ENSMUSG00000093752	ProperStrand	14	chr16	23110828	23110875	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.2008
chr11	5867376	5867393	protein_coding	Ykt6	utr3	ENSMUSG00000002741	NonProperStrand	1	chr4	11099002	11099029	protein_coding	Trp53inp1	utr3	ENSMUSG00000028211	ProperStrand	35	1	-inf
chr6	122680102	122680150	protein_coding	Slc2a3	exon	ENSMUSG00000003153	ProperStrand	682	chr2	150735319	150735339	protein_coding	Gins1	utr5	ENSMUSG00000027454	ProperStrand	51	1	-8.7770
chr11	110072973	110072991	protein_coding	Abca6	exon	ENSMUSG00000044749	NonProperStrand	3	chr7	116664819	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-8.6415
chr7	144806695	144806775	SINE	B4A	B4	chr7B4A144806648	NonProperStrand	1	chr7	144714703	144714792	SINE	RSINE1	B4	chr7RSINE1144714689	ProperStrand	1	1	-inf
chr8	73055128	73055450	protein_coding	Fkbp8	exon	ENSMUSG00000019428	ProperStrand	52	chr4	132530098	132530116	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	1	-9.8881
chr12	101623877	101623937	protein_coding	Ttc7b	intron	ENSMUSG00000033530	ProperStrand	49	chr19	8963087	8963183	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-4.6043
chr5	122020620	122020649	protein_coding	Aldh2	exon	ENSMUSG00000029455	ProperStrand	108	chr13	103895241	103895257	protein_coding	Mast4	intron	ENSMUSG00000034751	ProperStrand	150	1	-10.2938
chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr1	89346665	89346682	protein_coding	Gigyf2	utr3	ENSMUSG00000048000	NonProperStrand	4	1	-12.1048
chr2	75505212	75505246	protein_coding	Hnrnpa3	utr3	ENSMUSG00000059005	ProperStrand	289	chr2	144087324	144087440	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-3.5261
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	23506278	23506344	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	4	-1.0361
chr13	93279158	93279248	protein_coding-noncoding	Zfyve16	utr3	ENSMUSG00000021706	NonProperStrand	1	chr13	93278793	93278873	protein_coding	Zfyve16	intron	ENSMUSG00000021706	NonProperStrand	1	1	-inf
chr11	77996576	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	chr11	74718976	74719009	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	1	-2.1308
chr3	153991597	153991614	protein_coding	Lhx8	utr5	ENSMUSG00000093486	NonProperStrand	47	chr5	108336363	108336422	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-5.3555
chr9	15119650	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	chr9	15120930	15121034	snoRNA	ENSMUSG00000065265_SNORA32	.	ENSMUSG00000065265	ProperStrand	101	6	-11.4368
chr15	96063287	96063303	lincRNA	4833422M21Rik	exon	ENSMUSG00000085460	NonProperStrand	37	chr15	34370548	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-7.4436
chr11	102294643	102294844	protein_coding	Grn	exon	ENSMUSG00000034708	ProperStrand	43	chr15	5068442	5068478	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-6.7268
chr15	7131949	7131992	protein_coding	Lifr	exon	ENSMUSG00000054263	ProperStrand	64	chr11	6319526	6319575	protein_coding	Ppia	exon	ENSMUSG00000071866	ProperStrand	127	1	-11.6783
chr1	154699479	154699569	protein_coding	Smg7	intron	ENSMUSG00000042772	ProperStrand	88	chr4	131865891	131865971	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.2107
chr15	3929330	3929410	protein_coding	Fbxo4	exon	ENSMUSG00000022184	ProperStrand	1	chr8	73419695	73419785	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-inf
chr6	88429186	88429256	protein_coding	Ruvbl1	exon	ENSMUSG00000030079	ProperStrand	24	chrX	99380938	99380989	protein_coding	Rps4x	exon	ENSMUSG00000031320	ProperStrand	139	1	-13.4808
chr15	98684797	98684993	protein_coding	Mll2	exon	ENSMUSG00000048154	NonProperStrand	20	chr8	129468746	129468764	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	NonProperStrand	22	1	-17.5303
chr17	36100612	36100899	protein_coding	Abcf1	exon	ENSMUSG00000038762	ProperStrand	206	chr5	65780265	65780293	protein_coding	Rpl9	utr3	ENSMUSG00000047215	ProperStrand	113	1	-9.5691
chr10	80830045	80830129	protein_coding	Fzr1	utr3	ENSMUSG00000020235	ProperStrand	26	chr9	95765630	95765699	protein_coding	Atr	exon	ENSMUSG00000032409	ProperStrand	44	1	-15.6320
chr8	119480179	119480315	protein_coding	Atmin	exon	ENSMUSG00000047388	ProperStrand	26	chr16	23110989	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.4162
chr16	97782149	97782165	protein_coding	Mx2	exon	ENSMUSG00000023341	NonProperStrand	1	chr18	35714217	35714290	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-inf
chr10	82113849	82113865	protein_coding	Glt8d2	utr3	ENSMUSG00000020251	NonProperStrand	24	chr11	53088660	53094002	protein_coding	Hspa4	exon	ENSMUSG00000020361	ProperStrand	69	7	-inf
chr4	131908357	131908459	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr8	87525135	87525238	protein_coding	Hook2	exon	ENSMUSG00000052566	ProperStrand	204	1	-4.8608
chr11	8351260	8351361	protein_coding	Tns3	exon	ENSMUSG00000020422	ProperStrand	81	chr16	23111448	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.8748
chr2	38012954	38012970	protein_coding	Dennd1a	intron	ENSMUSG00000035392	NonProperStrand	128	chr2	26493382	26493422	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-2.3917
chr3	40613021	40614228	protein_coding	Plk4	exon	ENSMUSG00000025758	ProperStrand	15	chr11	68886951	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	3	-15.8301
chr19	25016725	25016793	snoRNA	ENSMUSG00000064896_SNORA19	.	ENSMUSG00000064896	ProperStrand	88	chr5	130295433	130295523	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-4.5100
chr3	152450607	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	chr2	158185576	158185666	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	6	-13.3500
chr17	30772308	30772324	protein_coding	Dnahc8	utr5	ENSMUSG00000033826	ProperStrand	246	chr18	75979994	75980011	protein_coding	Zbtb7c	utr5	ENSMUSG00000044646	ProperStrand	64	1	-10.3544
chr4	98642580	98642648	protein_coding	Dock7	exon	ENSMUSG00000028556	ProperStrand	20	chr16	23110959	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-11.5637
chr2	172825855	172825871	protein_coding	Rae1	utr5	ENSMUSG00000027509	NonProperStrand	44	chr9	21602970	21602986	protein_coding	Kank2	utr5	ENSMUSG00000032194	ProperStrand	196	1	-11.5648
chr7	17368938	17369038	protein_coding	Slc1a5	intron	ENSMUSG00000001918	ProperStrand	19	chr2	130972391	130972439	protein_coding	1700037H04Rik	utr3	ENSMUSG00000027327	ProperStrand	18	1	-17.9854
chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	chr9	15119706	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.3437
chr11	87913128	87913145	processed_transcript	2210416O15Rik	.	ENSMUSG00000087498	ProperStrand	76	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-8.1201
chr1	120355720	120355803	snRNA	ENSMUSG00000080542_U4atac	.	ENSMUSG00000080542	ProperStrand	73	chr16	23110907	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-2.5327
chr12	106870140	106870165	protein_coding	Atg2b	intron	ENSMUSG00000041341	ProperStrand	67	chr10	110918550	110918640	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	6	-17.2303
chr17	24776868	24776914	protein_coding	Slc9a3r2	utr3	ENSMUSG00000002504	ProperStrand	10	chr16	23111398	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.3721
chr7	117059768	117060928	protein_coding	Dennd5a	exon	ENSMUSG00000035901	ProperStrand	22	chr6	115757992	115758044	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	5	-19.0492
chr16	57391626	57391789	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr9	120038670	120039647	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	NonProperStrand	24	4	-20.9048
chr5	36750904	36750994	LINE	L1M4c	L1	chr5L1M4c36750521	NonProperStrand	1	chr5	36065970	36066050	protein_coding	Sh3tc1	intron	ENSMUSG00000036553	ProperStrand	16	1	-inf
chr17	13184994	13185015	protein_coding	Wtap	utr5	ENSMUSG00000060475	ProperStrand	119	chr2	158185535	158185635	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-5.1449
chr13	99629780	99629870	protein_coding	Tnpo1	exon	ENSMUSG00000009470	ProperStrand	56	chr8	73419701	73419781	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.2551
chr10	44878448	44878486	protein_coding	Prep	utr3	ENSMUSG00000019849	ProperStrand	21	chr7	29136563	29136641	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	6	-19.7529
chr2	113688509	113688552	protein_coding	Arhgap11a	utr5	ENSMUSG00000041219	ProperStrand	47	chr16	23111449	23111492	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.6112
chr4	43505766	43505846	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr9	14585434	14585524	protein_coding	Ankrd49	utr3	ENSMUSG00000031931	ProperStrand	2	1	-10.3311
chr14	33005035	33005234	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	chr5	74489544	74489677	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	43	-7.1720
chr8	125092129	125093034	protein_coding	Cdt1	exon	ENSMUSG00000006585	ProperStrand	47	chr9	15118243	15118321	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	3	-9.6060
chr13	104938293	104938309	protein_coding	2410002O22Rik	exon	ENSMUSG00000021711	NonProperStrand	1	chr4	131908809	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-inf
chr17	28467803	28467876	protein_coding	Rpl10a	exon	ENSMUSG00000037805	ProperStrand	121	chr8	32260371	32260423	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-3.3169
chrX	148297307	148321529	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	chr9	120038467	120038674	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	4	-1.7744
chr2	79132657	79132674	protein_coding-noncoding	Itga4	utr5	ENSMUSG00000027009	NonProperStrand	118	chr16	13144563	13147675	protein_coding	Ercc4	exon	ENSMUSG00000022545	ProperStrand	5	1	-17.0207
chrX	58687100	58687180	LTR	MTEa	MaLR	chrXMTEa58687117	ProperStrand	2	chr9	15119374	15119425	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-12.5137
chr10	80218193	80227360	protein_coding	Dot1l	utr5	ENSMUSG00000061589	NonProperStrand	4	chr18	33954814	33954904	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	NonProperStrand	24	1	-20.7136
chr11	72951404	72951439	protein_coding	Gsg2	exon	ENSMUSG00000050107	ProperStrand	9	chr4	131865945	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.2544
chr4	127666039	127893766	protein_coding	Csmd2	intron	ENSMUSG00000028804	NonProperStrand	34	chr16	23110843	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-3.0056
chr4	131825994	131826100	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	chr9	15119968	15119987	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	8	-inf
chr11	79806646	79806670	protein_coding	Suz12	utr5	ENSMUSG00000017548	ProperStrand	53	chr4	131866222	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-6.5715
chr10	39975690	39975759	protein_coding	Gtf3c6	intron	ENSMUSG00000019837	ProperStrand	4	chr11	83107884	83107903	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	2	-inf
chr10	127522230	127522247	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr5	124973695	124973775	protein_coding	Rilpl1	intron	ENSMUSG00000029392	ProperStrand	10	3	-20.5714
chr19	5655699	5655715	protein_coding	Sipa1	exon	ENSMUSG00000056917	NonProperStrand	6	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-8.2103
chr4	153534526	153534542	protein_coding	Tprgl	exon	ENSMUSG00000029030	ProperStrand	50	chr16	23111451	23111494	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.5189
chr9	19302097	19302114	protein_coding	Olfr851	exon	ENSMUSG00000052625	NonProperStrand	2	chr14	52829459	52829551	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-15.6648
chr5	45357439	45357503	LINE	L1Md_F2	L1	chr5L1Md_F245352183	ProperStrand	2	chr4	124532222	124532264	protein_coding	Yrdc	utr3	ENSMUSG00000028889	ProperStrand	13	2	-inf
chr11	106558420	106558494	protein_coding	Pecam1	exon	ENSMUSG00000020717	ProperStrand	56	chr5	3693225	3693241	protein_coding	Ankib1	exon	ENSMUSG00000040351	NonProperStrand	98	1	-12.4669
chr12	17285396	17285677	protein_coding	Pdia6	exon	ENSMUSG00000020571	ProperStrand	114	chr7	117189959	117190039	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.2123
chr9	64023021	64023072	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	chr11	88154143	88154162	protein_coding	Msi2	utr3	ENSMUSG00000069769	ProperStrand	159	1	-6.7403
chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	chr11	62416988	62417026	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-1.7475
chr10	110933134	110933827	protein_coding	Nap1l1	utr3	ENSMUSG00000058799	ProperStrand	185	chr11	68887032	68887066	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	2	-3.8261
chr4	41062305	41062360	protein_coding	Nol6	utr3	ENSMUSG00000028430	ProperStrand	98	chr7	150717298	150717348	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-4.5581
chr19	9681966	9682056	Satellite	MMSAT4	Satellite	chr19MMSAT49681870	ProperStrand	4	chr4	145039497	145039577	processed_transcript	Gm13227	.	ENSMUSG00000085101	ProperStrand	3	1	-inf
chr7	136800631	136800649	SINE	RSINE1	B4	chr7RSINE1136800606	ProperStrand	216	chr11	102416464	102416481	protein_coding	Gpatch8	intron	ENSMUSG00000034621	ProperStrand	49	1	-11.1527
chr1	176132642	176132665	protein_coding	Spna1	intron	ENSMUSG00000026532	ProperStrand	2	chr18	33954842	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-inf
chr1	194571787	194571880	snRNA	ENSMUSG00000064881_U5	.	ENSMUSG00000064881	ProperStrand	187	chr11	97642956	97643014	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-0.8106
chr1	88995234	88995252	protein_coding	Alpi	exon	ENSMUSG00000079440	NonProperStrand	7	chr19	8963037	8963127	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-10.5877
chr11	121314951	121320779	protein_coding	Tbcd	exon	ENSMUSG00000039230	ProperStrand	34	chr7	52381722	52381760	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-8.7138
chr13	40982775	40982792	protein_coding	Gcnt2	exon	ENSMUSG00000021360	ProperStrand	31	chr7	29136585	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-8.8650
chr11	95634339	95634357	protein_coding	Zfp652	intron	ENSMUSG00000075595	NonProperStrand	8	chr7	116663633	116663767	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-6.3908
chr1	134228111	134228200	protein_coding	Nuak2	exon	ENSMUSG00000009772	ProperStrand	11	chr19	8798744	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	4	-20.9585
chr3	82707847	82707863	antisense	4930564K09Rik	.	ENSMUSG00000086273	ProperStrand	48	chr11	6428089	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.6010
chr1	37898095	37898112	protein_coding	Tsga10	exon	ENSMUSG00000060771	ProperStrand	79	chr17	24665419	24665491	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	4	-14.0456
chr2	158182156	158182178	lincRNA	9430008C03Rik	intron	ENSMUSG00000085385	ProperStrand	1039	chr7	133941234	133942602	protein_coding	Aldoa	utr5	ENSMUSG00000030695	ProperStrand	721	1	-2.8582
chrX	119367454	119367474	LINE	L1MA4	L1	chrXL1MA4119367238	ProperStrand	3	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-15.7420
chr15	60661082	60661098	lincRNA	9930014A18Rik	exon	ENSMUSG00000044513	ProperStrand	54	chr5	130300476	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.6917
chr5	115940316	115940409	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	chr16	23110829	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	50	-14.0506
chr7	123476683	123476729	snoRNA	ENSMUSG00000064741_Snord14a	.	ENSMUSG00000064741	ProperStrand	83	chr17	35089181	35089227	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-4.8555
chr7	28421172	28421284	protein_coding	Akt2	exon	ENSMUSG00000004056	ProperStrand	100	chr17	27559700	27559717	protein_coding	Grm4	utr3	ENSMUSG00000063239	ProperStrand	147	1	-10.4886
chr2	129656755	129656793	protein_coding	Stk35	utr3	ENSMUSG00000037885	ProperStrand	28	chr4	56910496	56910613	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-7.6263
chr3	158043773	158043791	protein_coding	Lrrc7	intron	ENSMUSG00000028176	ProperStrand	10	chr10	23505152	23505200	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.3364
chr11	62416575	62416656	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr19	5796400	5799306	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	2	-5.7259
chr10	66998932	66998949	protein_coding	Egr2	intron	ENSMUSG00000037868	NonProperStrand	7	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-13.7938
chr17	65452916	65452938	LTR	MTC	MaLR	chr17MTC65452903	NonProperStrand	12	chr1	66741087	66741103	protein_coding	Unc80	exon	ENSMUSG00000055567	NonProperStrand	212	1	-14.0613
chr15	89200690	89200833	protein_coding	Ncaph2	exon	ENSMUSG00000008690	ProperStrand	65	chr9	83678799	83681879	protein_coding	Elovl4	exon	ENSMUSG00000032262	ProperStrand	159	1	-11.1965
chr7	31025316	31025373	protein_coding	Wdr62	exon	ENSMUSG00000037020	ProperStrand	16	chr10	23505152	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-8.7611
chr1	38267188	38267221	protein_coding	Aff3	exon	ENSMUSG00000037138	ProperStrand	20	chr17	24857762	24857852	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	3	-10.5025
chr19	59064715	59064732	protein_coding	4930506M07Rik	exon	ENSMUSG00000041362	ProperStrand	36	chr11	98878344	98878461	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	2	-11.7371
chr8	99194408	99194498	LINE	L1Md_F2	L1	chr8L1Md_F299193677	ProperStrand	1	chr7	54442593	54442683	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-inf
chr9	96978601	96978632	protein_coding	Slc25a36	utr3	ENSMUSG00000032449	ProperStrand	159	chr11	116938557	116938647	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	2	-7.1270
chr1	180259264	180259287	protein_coding	Hnrnpu	utr3	ENSMUSG00000039630	ProperStrand	286	chr7	117189958	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-0.8852
chr13	74841578	74841633	protein_coding	Cast	exon	ENSMUSG00000021585	ProperStrand	7	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-12.5984
chr8	38049667	38049683	LTR	MLT1A0	MaLR	chr8MLT1A038049422	NonProperStrand	91	chr5	108334195	108334266	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-4.0266
chr6	91937130	91937146	protein_coding	Fgd5	exon	ENSMUSG00000034037	ProperStrand	38	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.1263
chr11	29935988	29936068	LINE	L1Md_F	L1	chr11L1Md_F29933485	NonProperStrand	1	chr16	61713259	61713349	LINE	L1Md_A	L1	chr16L1Md_A61709700	NonProperStrand	1	1	-inf
chr18	24363855	24363872	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr19	8798743	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-2.9982
chr7	38352202	38352219	protein_coding	Zfp536	intron	ENSMUSG00000043456	ProperStrand	57	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-7.8420
chr17	4082101	4082171	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr7	97575691	97575707	protein_coding	Ccdc89	exon	ENSMUSG00000044362	ProperStrand	3	1	-16.3970
chr8	98269957	98270084	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	chr2	130101969	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	25	-19.5014
chr18	63109676	63109692	protein_coding	Apcdd1	exon	ENSMUSG00000071847	NonProperStrand	254	chr11	62418037	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-2.8511
chr11	50230494	50230557	protein_coding	Rufy1	intron	ENSMUSG00000020375	ProperStrand	3	chr4	41160815	41160853	protein_coding	Ubap2	utr5	ENSMUSG00000028433	ProperStrand	292	1	-16.4928
chr9	70960077	70960093	protein_coding	Aqp9	exon	ENSMUSG00000032204	NonProperStrand	118	chr5	74489584	74489678	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-2.5626
chr2	160775525	160775757	protein_coding	Chd6	exon	ENSMUSG00000057133	ProperStrand	104	chr18	35102297	35102341	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	2	-9.0075
chr3	135268101	135268119	protein_coding	Nfkb1	exon	ENSMUSG00000028163	ProperStrand	55	chr11	69483191	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-6.8292
chr15	36526809	36526835	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr7	52378398	52378438	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	1	-3.2442
chr18	35716773	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	chr15	98356816	98356913	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	12	-1.9000
chr11	62416977	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	chr16	38158092	38158170	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	7	-13.8023
chr7	144379548	144379566	LINE	L1MB8	L1	chr7L1MB8144379310	NonProperStrand	9	chr11	106362640	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-11.2794
chr12	88339190	88339208	SINE	B3A	B2	chr12B3A88339128	NonProperStrand	9	chr8	13014869	13014885	protein_coding	Mcf2l	exon	ENSMUSG00000031442	NonProperStrand	35	1	-18.0188
chr12	110888872	110888912	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr2	53010735	53010790	protein_coding	Prpf40a	exon	ENSMUSG00000061136	ProperStrand	129	2	-11.4673
chr17	75578474	75578490	protein_coding	Ltbp1	exon	ENSMUSG00000001870	ProperStrand	136	chr1	62686775	62686791	protein_coding	Pard3b	utr3	ENSMUSG00000046526	ProperStrand	31	1	-13.0036
chr2	107674217	107674307	LINE	Lx3_Mus	L1	chr2Lx3_Mus107674184	ProperStrand	1	chr2	107674102	107674182	LINE	Lx4A	L1	chr2Lx4A107671168	NonProperStrand	1	1	-inf
chr2	130101982	130102082	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	chr4	116828379	116828449	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-1.0963
chr8	113382523	113404857	protein_coding	Cog4	exon	ENSMUSG00000031753	ProperStrand	53	chr9	120039534	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	11	-19.2786
chr17	27957281	27957299	protein_coding	D17Wsu92e	utr5	ENSMUSG00000056692	NonProperStrand	11	chr4	119100402	119100450	protein_coding	Zmynd12	intron	ENSMUSG00000070806	ProperStrand	2	1	-inf
chr14	65438870	65438959	protein_coding	Hmbox1	intron	ENSMUSG00000021972	ProperStrand	35	chr7	150717298	150717345	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-6.5710
chr5	114293036	114293136	protein_coding	Coro1c	utr3	ENSMUSG00000004530	ProperStrand	44	chr9	15119646	15119675	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.1801
chr2	144365489	144365584	protein_coding	Polr3f	utr3	ENSMUSG00000027427	ProperStrand	3	chr10	23505181	23505209	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-6.9610
chr18	12172461	12172477	protein_coding	6030446N20Rik	intron	ENSMUSG00000049411	ProperStrand	235	chr18	73693085	73693188	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	3	-7.5370
chr14	65438838	65438938	protein_coding	Hmbox1	intron	ENSMUSG00000021972	ProperStrand	35	chr18	35716839	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.1046
chr5	117733466	117735751	protein_coding	Pebp1	exon	ENSMUSG00000032959	ProperStrand	54	chr2	160191182	160191200	protein_coding	Mafb	utr3	ENSMUSG00000074622	ProperStrand	31	1	-14.8566
chr11	117863760	117863776	protein_coding	Pgs1	exon	ENSMUSG00000017715	NonProperStrand	4	chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	1	-17.4456
chr9	65127126	65127142	protein_coding	Cilp	exon	ENSMUSG00000042254	ProperStrand	212	chr15	80758054	80758102	protein_coding	Tnrc6b	exon	ENSMUSG00000047888	ProperStrand	59	1	-10.8155
chr11	70211226	70211598	protein_coding	Pelp1	exon	ENSMUSG00000018921	ProperStrand	64	chr5	120935835	120936058	protein_coding	Plbd2	exon	ENSMUSG00000029598	ProperStrand	22	1	-15.2065
chr5	138607820	138607922	protein_coding	Mcm7	intron	ENSMUSG00000029730	ProperStrand	258	chr11	74718968	74719010	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	1	-6.1297
chr9	65541172	65541234	protein_coding	Zfp609	utr3	ENSMUSG00000040524	ProperStrand	87	chr18	35716703	35716803	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.5849
chr1	108924288	108924378	LINE	Lx3B	L1	chr1Lx3B108923443	NonProperStrand	2	chr8	9594232	9594312	protein_coding	Fam155a	intron	ENSMUSG00000079157	NonProperStrand	10	1	-inf
chrX	12865710	12865732	protein_coding	Ddx3x	exon	ENSMUSG00000000787	ProperStrand	67	chr8	73032220	73032300	protein_coding	2810422J05Rik	utr3	ENSMUSG00000055553	ProperStrand	171	2	-17.0329
chr7	108440949	108440967	protein_coding	Atg16l2	intron	ENSMUSG00000047767	ProperStrand	121	chr4	131865394	131865460	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-2.7269
chr2	166888978	166889011	snoRNA	ENSMUSG00000077515_SNORD12	.	ENSMUSG00000077515	ProperStrand	191	chr10	110918619	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	7	-12.4890
chr8	113679398	113679488	protein_coding	Glg1	utr3	ENSMUSG00000003316	ProperStrand	83	chr16	23111374	23111454	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.8462
chr14	25313394	25313414	protein_coding	Rps24	intron	ENSMUSG00000025290	ProperStrand	110	chr12	88778629	88778700	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	2	-8.7041
chr1	92507589	92508767	protein_coding	Cops8	exon	ENSMUSG00000034432	ProperStrand	9	chr7	116663689	116663758	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-6.1447
chr15	40891282	40891299	protein_coding	Zfpm2	intron	ENSMUSG00000022306	NonProperStrand	35	chr19	44137532	44142104	protein_coding	Erlin1	exon	ENSMUSG00000025198	ProperStrand	9	1	-18.0131
chr8	106918897	106918915	protein_coding	Cmtm4	intron	ENSMUSG00000051578	NonProperStrand	4	chr19	8799022	8799052	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-11.4702
chrX	148634295	148634311	protein_coding	Iqsec2	intron	ENSMUSG00000041115	NonProperStrand	10	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-9.4709
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chrX	84483704	84483720	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-2.1854
chrX	34622676	34622736	protein_coding	Rpl39	utr3	ENSMUSG00000079641	ProperStrand	37	chrX	34622917	34622942	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-4.0674
chr2	24825186	24827046	protein_coding	Wdr85	exon	ENSMUSG00000026975	ProperStrand	323	chr3	88715215	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-3.9659
chr4	62318890	62318908	protein_coding	Rgs3	utr3	ENSMUSG00000059810	ProperStrand	40	chr10	23505151	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.8310
chr5	115939535	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr17	13112566	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	5	-3.4876
chr3	104598144	104598244	protein_coding	Mov10	exon	ENSMUSG00000002227	ProperStrand	96	chr3	34549902	34550017	protein_coding	Sox2	exon	ENSMUSG00000074637	ProperStrand	299	1	-9.1518
chr4	68423441	68423457	protein_coding	Dbc1	exon	ENSMUSG00000028351	ProperStrand	78	chr10	6063958	6063975	protein_coding	Akap12	intron	ENSMUSG00000038587	ProperStrand	1008	1	-7.1532
chr17	31790660	31790712	protein_coding	U2af1	intron	ENSMUSG00000061613	ProperStrand	17	chr16	23111376	23111466	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.3471
chr11	75313447	75313479	protein_coding	Prpf8	utr3	ENSMUSG00000020850	ProperStrand	255	chr2	155456313	155456385	protein_coding	Myh7b	intron	ENSMUSG00000074652	ProperStrand	23	1	-12.3542
chr3	130432044	130432066	protein_coding	Rpl34	exon	ENSMUSG00000062006	ProperStrand	51	chr6	115758051	115758087	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-5.7905
chr5	115545912	115547202	protein_coding	Sppl3	exon	ENSMUSG00000029550	ProperStrand	33	chr10	116491949	116491980	protein_coding	Cct2	exon	ENSMUSG00000034024	ProperStrand	100	2	-20.2306
chr13	9833577	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr10	62048317	62048408	protein_coding	Ddx21	exon	ENSMUSG00000020075	ProperStrand	137	2	-5.7914
chr7	52780290	52780390	protein_coding	Ppp1r15a	exon	ENSMUSG00000040435	ProperStrand	9	chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-9.6932
chr15	82686528	82725637	protein_coding	Tcf20	exon	ENSMUSG00000041852	ProperStrand	658	chr1	162965530	162965595	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	4	-1.4009
chr5	100821639	100821942	protein_coding	Sec31a	exon	ENSMUSG00000035325	ProperStrand	61	chr10	110918658	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-3.4184
chr4	131825992	131826124	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	chr8	73419657	73419783	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-1.3643
chr10	80641716	80641765	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	chrX	71517859	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-1.3506
chr4	148581978	148582020	protein_coding	Kif1b	exon	ENSMUSG00000063077	ProperStrand	60	chr4	131908689	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-2.3640
chr10	77432751	77432769	protein_coding	Trpm2	intron	ENSMUSG00000009292	NonProperStrand	23	chr11	6428077	6428165	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.0081
chr3	30950942	30950970	protein_coding	Prkci	utr3	ENSMUSG00000037643	ProperStrand	39	chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	1	-10.7001
chr6	124864447	124864483	protein_coding	Ptms	exon	ENSMUSG00000030122	ProperStrand	21	chr5	108334246	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	2	-11.1566
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	3	-9.0992
chr19	59064715	59064732	protein_coding	4930506M07Rik	exon	ENSMUSG00000041362	ProperStrand	36	chr17	13112480	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-5.5727
chr3	96592580	96593804	protein_coding	Rnf115	exon	ENSMUSG00000028098	ProperStrand	46	chr2	26494783	26494829	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.5925
chr16	4940389	4940454	protein_coding	Nudt16l1	utr3	ENSMUSG00000022516	ProperStrand	7	chr10	80643336	80643397	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	3	-19.4671
chr15	101923472	101923571	protein_coding	Eif4b	exon	ENSMUSG00000058655	ProperStrand	484	chr18	73693116	73693139	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-1.7554
chr17	24857718	24857808	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	NonProperStrand	27	chr5	130300469	130300549	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	NonProperStrand	11	1	-18.1588
chr19	5049566	5049656	protein_coding	Brms1	utr3	ENSMUSG00000080268	ProperStrand	3	chr10	23505168	23505248	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-6.9610
chr10	128061666	128062326	protein_coding	Rps26	exon	ENSMUSG00000025362	ProperStrand	67	chr4	116828389	116828453	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-8.1615
chr8	64001187	64001287	protein_coding	Palld	intron	ENSMUSG00000058056	ProperStrand	39	chr15	79913288	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.4040
chr9	19462192	19462264	LINE	L1Md_A	L1	chr9L1Md_A19461964	NonProperStrand	28	chr5	108334233	108334333	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-6.3166
chr5	54389948	54389964	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	chr2	31924012	31924028	protein_coding	Fam78a	utr3	ENSMUSG00000050592	NonProperStrand	340	1	-7.3189
chr2	90235299	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	173332298	173332314	protein_coding	Arhgap30	exon	ENSMUSG00000048865	NonProperStrand	15	2	-11.6618
chrX	153988955	153988971	protein_coding	Mbtps2	exon	ENSMUSG00000046873	ProperStrand	7	chr11	106362640	106362690	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-11.8178
chr8	72816933	72817009	protein_coding	Homer3	exon	ENSMUSG00000003573	ProperStrand	45	chr3	123210854	123210880	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.5489
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr4	128028470	128028488	protein_coding	Csmd2	intron	ENSMUSG00000028804	ProperStrand	19	1	-11.0446
chr4	133628939	133628955	protein_coding	Aim1l	exon	ENSMUSG00000012123	ProperStrand	32	chr19	8799022	8799046	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-7.0802
chr5	145532285	145532385	protein_coding	Trrap	intron	ENSMUSG00000045482	ProperStrand	399	chr6	115758072	115758131	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-2.0165
chr14	50002919	50002936	protein_coding	Slc35f4	intron	ENSMUSG00000021852	NonProperStrand	4	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-13.4061
chr2	27385744	27385764	protein_coding	Wdr5	intron	ENSMUSG00000026917	NonProperStrand	2	chr17	24665420	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-12.3390
chr14	19102896	19102952	protein_coding	Rpl15	exon	ENSMUSG00000012405	ProperStrand	145	chr18	33954817	33954907	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-1.9757
chr5	34007371	34014636	protein_coding	Tacc3	exon	ENSMUSG00000037313	ProperStrand	26	chr9	15118322	15118378	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	13	-inf
chr18	62745454	62745471	protein_coding	Spink10	intron	ENSMUSG00000044176	NonProperStrand	7	chr2	145076803	145209256	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-12.1401
chr6	71364861	71379049	protein_coding	Rmnd5a	exon	ENSMUSG00000002222	ProperStrand	38	chr7	118219693	118219740	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-8.3353
chr6	83111671	83111687	protein_coding	1700003E16Rik	exon	ENSMUSG00000030030	ProperStrand	352	chr10	23505259	23505285	protein_coding	Rps12	intron	ENSMUSG00000061983	ProperStrand	309	1	-6.5069
chr17	26396990	26397011	protein_coding	Luc7l	intron	ENSMUSG00000024188	ProperStrand	15	chr8	125414719	125414786	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	1	-12.4356
chr2	79843543	79843559	protein_coding	Pde1a	intron	ENSMUSG00000059173	NonProperStrand	275	chr2	145076804	145209253	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-4.7371
chr12	87847407	87847440	protein_coding	Esrrb	exon	ENSMUSG00000021255	ProperStrand	254	chr4	116827119	116827155	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-4.2327
chr15	54844930	54845020	DNA	URR1B	MER1_type	chr15URR1B54844866	ProperStrand	1	chr18	67270693	67270773	protein_coding	Gnal	intron	ENSMUSG00000024524	NonProperStrand	3	1	-inf
chr9	75033729	75051620	protein_coding	Myo5a	exon	ENSMUSG00000034593	ProperStrand	89	chr16	23110893	23111010	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-1.8358
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr1	173332298	173332314	protein_coding	Arhgap30	exon	ENSMUSG00000048865	NonProperStrand	15	1	-15.9769
chr14	70187452	70187542	protein_coding	Rhobtb2	exon	ENSMUSG00000022075	ProperStrand	22	chr7	116663634	116663714	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.3535
chr9	70960077	70960093	protein_coding	Aqp9	exon	ENSMUSG00000032204	NonProperStrand	118	chr5	121828827	121828843	protein_coding	Trafd1	exon	ENSMUSG00000042726	ProperStrand	81	1	-11.3520
chr8	90723815	90723852	protein_coding	Papd5	utr5	ENSMUSG00000036779	ProperStrand	32	chr5	130300460	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-6.1950
chr17	13947517	13955157	protein_coding	Mllt4	exon	ENSMUSG00000068036	ProperStrand	156	chr7	134671400	134671480	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-5.9803
chr6	145564547	145564563	protein_coding	Tuba3b	utr5	ENSMUSG00000067338	ProperStrand	152	chr2	166890503	166890554	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-5.7216
chr2	142612151	142612175	protein_coding	Kif16b	intron	ENSMUSG00000038844	NonProperStrand	6	chr11	68886963	68887041	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	2	-14.2538
chr10	75510609	75510699	LTR	RMER17C	ERVK	chr10RMER17C75510596	ProperStrand	1	chr10	75510507	75510587	Simple_repeat	(TC)n	Simple_repeat	chr10(TC)n75510497	ProperStrand	1	1	-inf
chr13	18937205	18937758	protein_coding	Vps41	exon	ENSMUSG00000041236	ProperStrand	31	chr19	8963026	8963083	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.4420
chr8	87223593	87223610	protein_coding	Trmt1	exon	ENSMUSG00000001909	NonProperStrand	60	chr2	26494772	26494800	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.1070
chr11	55296197	55296287	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	chr13	96100553	96100633	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	1	-1.4585
chr6	14004159	14004239	LTR	RLTR13B4	ERVK	chr6RLTR13B414004010	ProperStrand	1	chr7	13157998	13158088	LTR	RLTR13B4	ERVK	chr7RLTR13B413157937	ProperStrand	1	1	-inf
chr16	23111373	23111503	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	chr4	130305550	130305620	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	6	-1.0372
chr11	58990701	58990717	protein_coding	Gjc2	exon	ENSMUSG00000043448	ProperStrand	8	chr5	121655127	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-7.7589
chr17	34252207	34252353	protein_coding	Brd2	exon	ENSMUSG00000024335	ProperStrand	69	chr2	166890804	166890858	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	1	-10.1005
chr2	121949511	121949528	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	chr15	79908929	79909012	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-2.6688
chr6	122679556	122679646	protein_coding	Slc2a3	utr3	ENSMUSG00000003153	ProperStrand	682	chr7	146070838	146070918	protein_coding	Ppp2r2d	intron	ENSMUSG00000041769	ProperStrand	62	1	-8.3854
chr8	86215048	86216536	protein_coding	Pkn1	exon	ENSMUSG00000057672	ProperStrand	36	chr11	98878345	98878401	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-7.3010
chr11	120488393	120488439	protein_coding	Mafg	utr3	ENSMUSG00000051510	ProperStrand	23	chr4	131865932	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.4190
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr13	96100554	96100693	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	2	-2.4069
chr7	146684406	146684425	protein_coding	Inpp5a	intron	ENSMUSG00000025477	ProperStrand	166	chrX	156315498	156315519	protein_coding	Sh3kbp1	intron	ENSMUSG00000040990	ProperStrand	67	1	-11.0493
chr10	127496106	127496122	protein_coding	Ptges3	utr5	ENSMUSG00000071072	NonProperStrand	11	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-10.6529
chr2	178194847	178194864	protein_coding	Cdh26	exon	ENSMUSG00000039155	NonProperStrand	77	chr7	117189864	117189934	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	2	-9.3298
chr9	59719466	59719556	protein_coding	Myo9a	exon	ENSMUSG00000039585	ProperStrand	27	chr5	108336364	108336444	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-6.4517
chr1	12658186	12658246	lincRNA	Gm17644	exon	ENSMUSG00000066918	NonProperStrand	37	chr8	73419657	73419757	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.0248
chr9	78328342	78328442	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr11	33059934	33059995	protein_coding	Npm1	exon	ENSMUSG00000057113	ProperStrand	352	9	-20.0319
chr16	16924659	16924678	protein_coding	Ppm1f	utr3	ENSMUSG00000026181	ProperStrand	37	chr2	118611946	118611962	protein_coding	Disp2	exon	ENSMUSG00000040035	NonProperStrand	204	1	-11.8350
chr2	126649746	126649836	protein_coding	Trpm7	exon	ENSMUSG00000027365	ProperStrand	34	chr17	24857717	24857797	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.2959
chr13	13592741	13592812	protein_coding	Nid1	exon	ENSMUSG00000005397	ProperStrand	112	chr15	34370545	34370624	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-2.4404
chr5	124801090	124801107	protein_coding	Cdk2ap1	intron	ENSMUSG00000029394	NonProperStrand	15	chr7	127344728	127345295	protein_coding	Crym	exon	ENSMUSG00000030905	ProperStrand	1	1	-inf
chr8	41570003	41570019	protein_coding	Zdhhc2	utr3	ENSMUSG00000039470	NonProperStrand	85	chr12	17553062	17553090	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-4.4195
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	110288024	110288041	protein_coding	Ptpn23	exon	ENSMUSG00000036057	NonProperStrand	6	1	-9.1372
chr4	151730301	151730737	protein_coding	Chd5	exon	ENSMUSG00000005045	NonProperStrand	147	chr9	15118322	15118378	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-1.9201
chr8	68305516	68305606	protein_coding	March1	intron	ENSMUSG00000036469	ProperStrand	13	chr5	108336937	108337017	protein_coding	Rpl5	utr3	ENSMUSG00000058558	ProperStrand	235	3	-inf
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chrX	100517086	100517102	protein_coding	Cdx4	exon	ENSMUSG00000031326	NonProperStrand	30	2	-9.5029
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr12	110923174	110923231	snoRNA	ENSMUSG00000084487_SNORD113	.	ENSMUSG00000084487	ProperStrand	183	1	-6.5730
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr1	130240041	130240912	protein_coding	Mcm6	exon	ENSMUSG00000026355	ProperStrand	69	2	-9.1968
chr1	51535212	51535240	protein_coding	Obfc2a	utr5	ENSMUSG00000026107	ProperStrand	9	chr3	51263970	51264006	protein_coding	Naa15	exon	ENSMUSG00000063273	ProperStrand	34	1	-17.7938
chr8	72334599	72334615	protein_coding	Gmip	exon	ENSMUSG00000036246	ProperStrand	102	chr2	145077954	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-6.6693
chr9	108730277	108730293	protein_coding	Celsr3	exon	ENSMUSG00000023473	ProperStrand	31	chr3	108357255	108357309	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	2	-9.5230
chr2	158185530	158185620	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr7	52381717	52381797	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-1.3265
chr11	83107805	83107902	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	chr7	116664795	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	14	-10.0541
chr15	34370659	34370699	protein_coding-noncoding	Rpl30	utr3	ENSMUSG00000058600	ProperStrand	30	chr11	69483136	69483245	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-6.2839
chr4	41148555	41149311	protein_coding	Ubap2	exon	ENSMUSG00000028433	ProperStrand	292	chr16	23111374	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	5	-0.9008
mmu-miR-6240	3	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr6	93742378	93742394	protein_coding	Magi1	exon	ENSMUSG00000045095	ProperStrand	106	1	-4.7968
chr13	21903636	21903700	protein_coding	Hist1h4m	utr5	ENSMUSG00000069306	ProperStrand	1	chr16	23110940	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr8	113037603	113037621	protein_coding	Hydin	intron	ENSMUSG00000059854	NonProperStrand	42	chr19	8798739	8798762	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-5.4950
chr7	122618907	122618925	protein_coding	Sox6	utr3	ENSMUSG00000051910	ProperStrand	18	chr7	29136523	29136648	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.5789
chr10	90584812	90584899	protein_coding-noncoding	Slc25a3	utr3	ENSMUSG00000061904	ProperStrand	13	chr10	23505150	23505203	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-9.6524
chr4	137860800	137860823	protein_coding	Ddost	exon	ENSMUSG00000028757	ProperStrand	49	chr18	33010059	33010149	protein_coding	Wdr36	exon	ENSMUSG00000038299	ProperStrand	28	3	-inf
chr18	57400307	57400324	protein_coding	Megf10	exon	ENSMUSG00000024593	ProperStrand	143	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-3.5530
chr8	108233712	108233729	protein_coding	4933405L10Rik	exon	ENSMUSG00000013158	ProperStrand	94	chr19	8963027	8963083	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.5644
chr4	131866610	131866673	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	chr11	69483136	69483277	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	4	-0.9894
chr9	40131582	40131686	protein_coding	Gramd1b	intron	ENSMUSG00000040111	ProperStrand	40	chr7	52381973	52382013	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	14	-inf
chr15	101927341	101927361	protein_coding	Eif4b	utr3	ENSMUSG00000058655	ProperStrand	484	chr7	117166746	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-1.2241
chr10	41644311	41644329	protein_coding	Armc2	exon	ENSMUSG00000071324	ProperStrand	281	chr10	110918591	110918623	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-0.9838
chr14	15572353	15572371	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr10	60676372	60676388	protein_coding	Adamts14	exon	ENSMUSG00000059901	NonProperStrand	127	1	-9.7788
chr14	57532859	57532959	protein_coding	Zmym2	exon	ENSMUSG00000021945	ProperStrand	9	chr11	69483136	69483187	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-10.0340
chr15	73060374	73062324	protein_coding	Ptk2	utr3	ENSMUSG00000022607	ProperStrand	31	chr2	26768386	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-6.9097
chr10	122002951	122003031	LINE	L1Md_F2	L1	chr10L1Md_F2122002095	ProperStrand	17	chr6	110343660	110343750	LINE	L1Md_A	L1	chr6L1Md_A110343299	ProperStrand	1	1	-inf
chr13	13917634	13917650	protein_coding	Gng4	utr3	ENSMUSG00000021303	NonProperStrand	7	chr19	8799597	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-11.1722
chr7	117958142	117958194	SINE	B3A	B2	chr7B3A117958088	ProperStrand	1	chr3	96527940	96527956	protein_coding	Polr3c	exon	ENSMUSG00000028099	NonProperStrand	75	1	-inf
chr13	96098342	96098442	protein_coding	Zbed3	intron	ENSMUSG00000041995	ProperStrand	33	chr4	131908240	131908292	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.3621
chr2	91460371	91460461	protein_coding	Ckap5	utr3	ENSMUSG00000040549	ProperStrand	53	chr8	129468778	129468858	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-4.6513
chr1	167796869	167799154	protein_coding	Pou2f1	utr3	ENSMUSG00000026565	ProperStrand	34	chr5	108333572	108333620	snoRNA	ENSMUSG00000064453_Snord21	.	ENSMUSG00000064453	ProperStrand	201	1	-12.0348
chr6	120167583	120167608	protein_coding	B4galnt3	intron	ENSMUSG00000041372	ProperStrand	36	chr4	131908356	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-3.9799
chr4	85016349	85016365	protein_coding	Sh3gl2	intron	ENSMUSG00000028488	NonProperStrand	313	chr11	6428088	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-0.6973
chr3	58352861	58356534	protein_coding	Eif2a	exon	ENSMUSG00000027810	ProperStrand	11	chr11	79950546	79950563	protein_coding	1110002N22Rik	utr3	ENSMUSG00000046909	ProperStrand	45	1	-17.3521
chr14	35349798	35355071	protein_coding	Ldb3	exon	ENSMUSG00000021798	ProperStrand	6	chr7	116664794	116664884	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-7.0474
chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	chr11	100181444	100181982	protein_coding	Eif1	exon	ENSMUSG00000035530	ProperStrand	115	2	-12.4087
chr7	150462299	150462316	protein_coding	Kcnq1	intron	ENSMUSG00000009545	ProperStrand	59	chr17	27236036	27236052	protein_coding	Itpr3	exon	ENSMUSG00000042644	ProperStrand	137	1	-11.6894
chr2	38012954	38012970	protein_coding	Dennd1a	intron	ENSMUSG00000035392	NonProperStrand	128	chrX	84483698	84483721	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	2	-10.8668
chr5	65952377	65952395	protein_coding	Ube2k	intron	ENSMUSG00000029203	ProperStrand	289	chr1	9932550	9932625	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-4.6481
chr7	13846274	13846290	protein_coding	6330408A02Rik	utr3	ENSMUSG00000070814	ProperStrand	10	chr9	15118329	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-6.9876
chr9	82800595	82802317	protein_coding	Phip	exon	ENSMUSG00000032253	ProperStrand	43	chr10	56108047	56108127	protein_coding	Gja1	exon	ENSMUSG00000050953	ProperStrand	70	1	-13.6773
chr6	123089131	123089269	protein_coding	Clec4a2	exon	ENSMUSG00000030148	ProperStrand	44	chr5	151755616	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-8.3608
chr5	110530359	110530376	protein_coding-noncoding	Plcxd1	utr5	ENSMUSG00000064247	ProperStrand	1	chr11	6428109	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-inf
chr16	24720867	24720909	protein_coding	Lpp	intron	ENSMUSG00000033306	ProperStrand	38	chr6	136758178	136758195	protein_coding	H2afj	utr3	ENSMUSG00000060032	ProperStrand	25	1	-15.9952
chr17	67712818	67712835	LTR	ORR1E	MaLR	chr17ORR1E67712788	ProperStrand	39	chr14	76247765	76247811	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-4.9994
chr13	91062787	91063221	protein_coding	Rps23	exon	ENSMUSG00000049517	ProperStrand	34	chr14	33005038	33005094	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-5.0835
chr6	87793897	87795751	protein_coding	Cnbp	exon	ENSMUSG00000030057	ProperStrand	46	chr4	131908688	131908796	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-6.5677
chrX	70237450	70237472	miRNA	Mir2137	.	ENSMUSG00000089357	ProperStrand	50	chr10	23505152	23505253	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-2.8089
chr5	121070696	121071640	protein_coding	Ddx54	exon	ENSMUSG00000029599	ProperStrand	104	chr2	26494724	26494814	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	7	-15.6929
chr6	126594905	126594921	protein_coding	Kcna1	utr5	ENSMUSG00000047976	NonProperStrand	2	chr16	23111766	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-8.9529
chr5	136385594	136385651	protein_coding	Ywhag	utr3	ENSMUSG00000051391	ProperStrand	142	chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	1	-6.8781
chr2	121949511	121949527	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	chr2	118616442	118616458	protein_coding	Disp2	exon	ENSMUSG00000040035	NonProperStrand	204	1	-7.8521
chr19	46082830	46082846	lincRNA	4930505N22Rik	intron	ENSMUSG00000090325	NonProperStrand	2	chr5	130300503	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-9.6890
chrX	12671248	12734825	protein_coding	Usp9x	exon	ENSMUSG00000031010	ProperStrand	174	chr10	110918549	110918639	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-3.0398
chr4	5568979	5568995	lincRNA	4930423M02Rik	exon	ENSMUSG00000086066	ProperStrand	7	mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	1	-10.2929
chr11	57938653	57938707	protein_coding	Gemin5	exon	ENSMUSG00000037275	ProperStrand	33	chr16	23110842	23110873	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.9284
chr12	77811472	77811488	protein_coding	Spnb1	utr5	ENSMUSG00000021061	NonProperStrand	37	chr7	54110750	54110778	protein_coding	Ldha	utr3	ENSMUSG00000063229	ProperStrand	280	1	-11.2011
chr9	122075466	122075482	protein_coding	Snrk	exon	ENSMUSG00000038145	NonProperStrand	97	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-4.2775
chr7	130555981	130556060	protein_coding	Lcmt1	intron	ENSMUSG00000030763	ProperStrand	18	chr11	69481383	69481473	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	6	-20.2599
chr18	67478335	67478360	protein_coding	Impa2	utr3	ENSMUSG00000024525	ProperStrand	31	chr9	15119697	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-9.4599
chr11	117582907	117582997	protein_coding	Tnrc6c	exon	ENSMUSG00000025571	ProperStrand	51	chr16	23110491	23110571	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.7428
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr5	76728832	76728848	protein_coding	Clock	intron	ENSMUSG00000029238	NonProperStrand	64	1	-8.5865
chr11	23156447	23156505	protein_coding	Xpo1	utr5	ENSMUSG00000020290	ProperStrand	123	chr3	123210854	123210889	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-2.0121
chr14	68295665	68295740	protein_coding	Cdca2	exon	ENSMUSG00000048922	ProperStrand	50	chr4	116826700	116826744	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	6	-19.5703
chr15	6514881	6514906	Low_complexity	AT_rich	Low_complexity	chr15AT_rich6514865	NonProperStrand	1	chr4	131908292	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-inf
chr18	13882264	13882281	protein_coding	Zfp521	intron	ENSMUSG00000024420	NonProperStrand	9	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-11.6174
chr4	47052550	47052567	protein_coding	Anks6	exon	ENSMUSG00000066191	NonProperStrand	10	chr16	23111374	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.3721
chr13	9833551	9833653	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr11	55296195	55296333	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	9	-4.1152
chr12	83088896	83088967	protein_coding	Pcnx	exon	ENSMUSG00000021140	ProperStrand	32	chr4	102699283	102699419	protein_coding	Insl5	utr5	ENSMUSG00000066090	ProperStrand	1	1	-inf
chr13	3555659	3555746	protein_coding	Gdi2	exon	ENSMUSG00000021218	ProperStrand	49	chr9	64024967	64024998	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	1	-9.5489
chr2	129627400	129627416	protein_coding	Stk35	exon	ENSMUSG00000037885	NonProperStrand	10	chr9	120037980	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	2	-13.3648
chr10	77452678	77452904	protein_coding	Pfkl	exon	ENSMUSG00000020277	ProperStrand	179	chr16	23111373	23111463	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-1.5713
chr2	33875938	33875956	lincRNA	C230014O12Rik	exon	ENSMUSG00000087461	NonProperStrand	9	chr19	7357616	7357632	protein_coding	Mark2	exon	ENSMUSG00000024969	ProperStrand	75	1	-16.6841
chr9	95525000	95525036	antisense	Gm16126	.	ENSMUSG00000086585	NonProperStrand	229	chr4	131908687	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	6	-2.1027
chr18	60937530	60938088	protein_coding	Rps14	exon	ENSMUSG00000024608	ProperStrand	154	chr14	121332481	121332531	protein_coding	Ipo5	exon	ENSMUSG00000030662	ProperStrand	135	1	-9.7945
chrX	84483697	84483757	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr19	8963027	8963183	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	8	-1.3924
chr3	99875998	99876014	protein_coding	Spag17	exon	ENSMUSG00000027867	ProperStrand	5	chr2	166889035	166889056	snoRNA	ENSMUSG00000077515_SNORD12	.	ENSMUSG00000077515	ProperStrand	191	1	-16.1139
chr7	51843270	51843308	lincRNA	Gm15396	intron	ENSMUSG00000087560	NonProperStrand	2	chr11	69482369	69482406	snoRNA	ENSMUSG00000089542_snoU6-77	.	ENSMUSG00000089542	ProperStrand	138	2	-inf
chr8	125414673	125418819	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	chr8	73419682	73419786	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-1.0497
chr12	110740177	110740198	SINE	RSINE1	B4	chr12RSINE1110740068	ProperStrand	4	chr11	97642952	97643032	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	4	-inf
chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	chr11	62416599	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-1.5797
chr5	140229433	140229523	protein_coding	Ints1	exon	ENSMUSG00000029547	ProperStrand	45	chr9	115023567	115023647	protein_coding	Osbpl10	intron	ENSMUSG00000040875	ProperStrand	6	1	-18.2134
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr15	100299084	100299100	lincRNA	5330439K02Rik	exon	ENSMUSG00000092050	NonProperStrand	36	2	-8.9504
chr18	77911662	77911723	protein_coding	8030462N17Rik	intron	ENSMUSG00000047466	ProperStrand	17	chr1	72290938	72290974	snRNA	ENSMUSG00000093111_AC120136.1	.	ENSMUSG00000093111	ProperStrand	137	2	-21.3726
chr4	43505837	43505927	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr15	102034389	102034410	protein_coding	Zfp740	intron	ENSMUSG00000046897	NonProperStrand	4	1	-8.5468
chr5	139711577	139711667	protein_coding	Sun1	exon	ENSMUSG00000036817	ProperStrand	108	chr1	184245988	184246044	protein_coding	Fbxo28	utr3	ENSMUSG00000047539	ProperStrand	27	1	-13.7470
chr5	21263225	21263597	protein_coding	Dnajc2	exon	ENSMUSG00000029014	ProperStrand	31	chr2	25078460	25078526	protein_coding	Tubb4b	exon	ENSMUSG00000036752	ProperStrand	58	1	-14.7108
chr10	95026514	95026616	protein_coding	Nudt4	utr5	ENSMUSG00000020029	NonProperStrand	5	chr6	8029700	8029716	protein_coding	Col28a1	exon	ENSMUSG00000068794	NonProperStrand	4	2	-20.9389
chr11	98297305	98297321	protein_coding	Erbb2	exon	ENSMUSG00000062312	ProperStrand	24	chr9	120039587	120039677	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-5.0594
chrX	71533839	71534003	protein_coding	Taz	exon	ENSMUSG00000009995	ProperStrand	59	chr10	82219486	82224590	protein_coding	Nfyb	exon	ENSMUSG00000020248	ProperStrand	25	1	-15.0985
chr8	83234493	83235575	protein_coding	Smarca5	exon	ENSMUSG00000031715	ProperStrand	115	chr9	108467700	108467727	protein_coding	Impdh2	exon	ENSMUSG00000062867	ProperStrand	74	1	-11.5849
chr10	92698279	92698786	protein_coding	Cdk17	exon	ENSMUSG00000020015	ProperStrand	21	chr3	68889051	68889133	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	5	-20.1052
chr18	78020038	78020054	protein_coding	Atp5a1	exon	ENSMUSG00000025428	ProperStrand	254	chr7	148634712	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-1.5146
chr2	158205158	158205217	protein_coding	Snhg11	intron	ENSMUSG00000044349	ProperStrand	8	chr16	23111486	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.8232
chr13	55589253	55589269	protein_coding	Dbn1	exon	ENSMUSG00000034675	ProperStrand	43	chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	1	-11.2905
chr15	79908921	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr15	79908930	79909019	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	14	-1.0481
chr13	28843546	28843562	lincRNA	2610307P16Rik	intron	ENSMUSG00000085936	ProperStrand	154	chr8	73419743	73419775	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-1.5640
chr6	83892933	83893013	protein_coding	Zfml	exon	ENSMUSG00000030016	ProperStrand	45	chr8	73419681	73419771	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.6573
chr15	12802770	12802870	protein_coding	Drosha	intron	ENSMUSG00000022191	ProperStrand	163	chr10	90581034	90581087	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-2.9487
chr9	36592022	36592066	protein_coding	Ei24	intron	ENSMUSG00000062762	ProperStrand	25	chr4	131908236	131908350	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.8464
chr12	82046769	82047566	protein_coding	Srsf5	utr5	ENSMUSG00000021134	ProperStrand	68	chr5	74489581	74489680	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-3.5459
chr2	32781399	32781415	protein_coding	Lrsam1	utr3	ENSMUSG00000026792	ProperStrand	80	chr4	56910496	56910590	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	6	-19.9968
chr3	94965441	94965458	protein_coding	Sema6c	intron	ENSMUSG00000038777	NonProperStrand	4	chr8	129468746	129468795	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-9.9983
chr8	97387662	97387683	protein_coding	Polr2c	utr3	ENSMUSG00000031783	ProperStrand	16	chr5	111121066	111121131	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	2	-14.4957
chr8	74013109	74013125	protein_coding	Gtpbp3	exon	ENSMUSG00000007610	ProperStrand	21	chr11	62416600	62416621	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-7.2498
chr1	162966855	162966883	non_coding	Gas5	.	ENSMUSG00000053332	ProperStrand	144	chr1	162966812	162966854	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	2	-7.5608
chrX	7408626	7408729	protein_coding	Kcnd1	exon	ENSMUSG00000009731	ProperStrand	19	chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	1	-14.8985
chr19	47332326	47332378	protein_coding	Neurl1a	utr3	ENSMUSG00000006435	ProperStrand	41	chr6	112670836	112670852	protein_coding	Srgap3	utr3	ENSMUSG00000030257	NonProperStrand	208	1	-11.5879
chr4	126241209	126250401	protein_coding	Clspn	exon	ENSMUSG00000042489	ProperStrand	89	chr4	131908298	131908409	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-1.8079
chr5	90679509	90681960	protein_coding	Ankrd17	exon	ENSMUSG00000055204	ProperStrand	77	chr7	117190018	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.8842
chr3	94688655	94688892	protein_coding	Psmb4	exon	ENSMUSG00000005779	ProperStrand	26	chr4	131865889	131865979	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.1929
chr8	109937056	109937078	protein_coding	Nob1	exon	ENSMUSG00000003848	ProperStrand	28	chrX	148647855	148647871	protein_coding	Iqsec2	exon	ENSMUSG00000041115	NonProperStrand	10	1	-18.1640
chr4	118804771	118804861	protein_coding	Slc2a1	exon	ENSMUSG00000028645	ProperStrand	361	chr2	166395935	166395952	protein_coding	Prex1	exon	ENSMUSG00000039621	ProperStrand	20	1	-11.9447
chr18	47459752	47463790	protein_coding	Sema6a	exon	ENSMUSG00000019647	ProperStrand	62	chr4	116827121	116827187	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	4	-19.3694
chr6	97497473	97497553	snoRNA	ENSMUSG00000064724_SNORA63	.	ENSMUSG00000064724	ProperStrand	35	chr15	34370544	34370634	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-4.5674
chr6	35239916	35251726	protein_coding	Slc13a4	exon	ENSMUSG00000029843	ProperStrand	19	chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	1	-14.0206
chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-2.5901
chr17	23965883	23965935	protein_coding	Tceb2	exon	ENSMUSG00000055839	ProperStrand	12	chr4	131866162	131866252	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-6.8239
chr1	24621423	24621459	protein_coding	Gm10925	intron	ENSMUSG00000090378	NonProperStrand	70	chr18	35716811	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.9199
chr4	108278918	108278934	protein_coding	Orc1	exon	ENSMUSG00000028587	ProperStrand	161	chr11	6315933	6318108	protein_coding	Ppia	exon	ENSMUSG00000071866	ProperStrand	127	1	-9.8278
chr17	39985308	39985727	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr13	49779668	49779805	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	2	-1.3446
chrX	132673816	132673833	protein_coding	Bex4	intron	ENSMUSG00000047844	NonProperStrand	70	chr14	63287574	63287613	protein_coding	Serpine3	intron	ENSMUSG00000091155	ProperStrand	210	1	-10.4909
chr9	44581841	44586653	protein_coding	Ift46	utr5	ENSMUSG00000002031	ProperStrand	28	chr16	23110844	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.2442
chr4	140341999	140342089	protein_coding	Padi3	utr3	ENSMUSG00000025328	ProperStrand	12	chr6	120167565	120167582	protein_coding	B4galnt3	exon	ENSMUSG00000041372	NonProperStrand	3	1	-inf
chr18	62745454	62745471	protein_coding	Spink10	intron	ENSMUSG00000044176	NonProperStrand	7	chr8	73419760	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-7.3719
chr2	128492399	128494718	protein_coding	Anapc1	exon	ENSMUSG00000014355	ProperStrand	38	chr17	24665420	24665459	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-5.8336
chr13	56197540	56205700	protein_coding	H2afy	exon	ENSMUSG00000015937	ProperStrand	103	chr5	130300460	130300540	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.6356
chr7	30231492	30231593	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	chr19	8963032	8963048	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-5.7259
chr10	44827606	44834891	protein_coding	Prep	exon	ENSMUSG00000019849	ProperStrand	21	chr8	32260335	32260411	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-6.6981
chr12	81735225	81735295	protein_coding	Erh	utr3	ENSMUSG00000021131	ProperStrand	20	chr7	52382754	52382816	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-8.9616
chr11	62366462	62366502	protein_coding	Ubb	exon	ENSMUSG00000019505	ProperStrand	32	chr4	122968599	122968662	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-7.5335
chr3	34550059	34550126	protein_coding	Sox2	exon	ENSMUSG00000074637	ProperStrand	299	chr1	162967540	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-0.9253
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr1	95303715	95303788	protein_coding	Hdlbp	utr3	ENSMUSG00000034088	ProperStrand	97	1	-6.0780
chr10	76515129	76515178	protein_coding	Col18a1	utr3	ENSMUSG00000001435	ProperStrand	287	chr4	131866155	131866245	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-2.1535
chr13	112540780	112541440	protein_coding	Map3k1	exon	ENSMUSG00000021754	ProperStrand	113	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.8928
chr5	54389949	54389967	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	2	-8.5964
chr9	62992379	62992395	protein_coding	Skor1	exon	ENSMUSG00000022245	NonProperStrand	70	chr12	104435212	104435230	protein_coding	Prima1	utr3	ENSMUSG00000041669	NonProperStrand	3	1	-21.3208
chr1	193916282	193916299	protein_coding	Traf5	utr5	ENSMUSG00000026637	ProperStrand	13	chr2	26225075	26225114	protein_coding	Snapc4	exon	ENSMUSG00000036281	ProperStrand	19	1	-18.8581
chr17	66198724	66198759	protein_coding	Ralbp1	utr3	ENSMUSG00000024096	ProperStrand	39	chr5	128757319	128757336	protein_coding	Tmem132d	intron	ENSMUSG00000034310	ProperStrand	20	1	-16.3721
chr6	83759909	83759999	protein_coding	Paip2b	exon	ENSMUSG00000045896	ProperStrand	19	chr8	32260352	32260432	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	8	-19.8300
chr4	131866181	131866271	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	NonProperStrand	19	chr8	73419682	73419772	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	NonProperStrand	53	1	-15.8908
chr17	75695615	75709527	protein_coding	Ltbp1	exon	ENSMUSG00000001870	ProperStrand	136	chr9	15119724	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.3334
chr15	79566020	79566037	protein_coding	Sun2	intron	ENSMUSG00000042524	NonProperStrand	3	chr16	23110454	23110578	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-8.5395
chr6	148877128	148879145	protein_coding	Fam60a	exon	ENSMUSG00000039985	ProperStrand	68	chr7	118219573	118219623	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-3.9346
chr15	98692965	98692982	protein_coding	Mll2	exon	ENSMUSG00000048154	NonProperStrand	20	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-9.9579
chr2	152238914	152238949	protein_coding	Zcchc3	utr3	ENSMUSG00000074682	ProperStrand	11	chr17	35089179	35089227	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-8.9052
chr10	80613049	80613117	protein_coding	Zbtb7a	utr3	ENSMUSG00000035011	ProperStrand	39	chr2	130101263	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-7.4494
chr15	40489833	40489850	protein_coding	Zfpm2	intron	ENSMUSG00000022306	ProperStrand	8	chr19	8799581	8799645	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-10.8847
chr11	55314156	55314210	protein_coding	G3bp1	utr3	ENSMUSG00000018583	ProperStrand	106	chr4	126703409	126703426	protein_coding	Sfpq	exon	ENSMUSG00000028820	ProperStrand	340	1	-8.6977
chr9	78023109	78023148	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr3	153572354	153572549	protein_coding	Rabggtb	exon	ENSMUSG00000038975	ProperStrand	667	1	-1.5465
chr2	164661988	164662503	protein_coding	Ctsa	exon	ENSMUSG00000017760	ProperStrand	36	chr10	23505152	23505185	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.9992
chr12	60141384	60141509	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	chr14	76247711	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	7	-2.1391
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr11	69483136	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	14	-4.3533
chr2	167836657	167836676	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	chr5	121655018	121655156	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.6871
chr4	131908357	131908461	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr19	8798499	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	7	-6.0737
chr13	55348018	55411996	protein_coding	Nsd1	intron	ENSMUSG00000021488	ProperStrand	186	chr18	35716740	35716859	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	6	-6.0472
chr16	5256015	5256031	protein_coding	Fam86	utr5	ENSMUSG00000022544	ProperStrand	231	chr13	49779667	49779716	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-4.3865
chr8	122129036	122129052	protein_coding	Taf1c	utr5	ENSMUSG00000031832	ProperStrand	26	chr4	57706987	57707003	protein_coding	Palm2	intron	ENSMUSG00000090053	NonProperStrand	187	1	-12.7265
chr13	34219242	34219332	protein_coding	Tubb2b	utr3	ENSMUSG00000045136	ProperStrand	49	chr7	134671398	134671478	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	6	-21.8113
chr8	48760335	48760352	protein_coding	Ing2	utr5	ENSMUSG00000063049	NonProperStrand	1	chr4	56910536	56910626	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-inf
chr15	17056818	17056838	LINE	Lx2	L1	chr15Lx217056492	ProperStrand	1	chr3	123210862	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	NonProperStrand	45	1	-inf
chr11	61304363	61304462	protein_coding	Mapk7	exon	ENSMUSG00000001034	ProperStrand	10	chr1	162966010	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-7.1350
chr2	90235294	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	71193955	71194001	protein_coding	Tgif1	utr3	ENSMUSG00000047407	ProperStrand	64	2	-7.2425
chr6	122687096	122687162	protein_coding	Slc2a3	exon	ENSMUSG00000003153	ProperStrand	682	chr13	96374713	96374729	protein_coding	F2r	exon	ENSMUSG00000048376	NonProperStrand	88	1	-7.6862
chr16	37532140	37532223	protein_coding	Gtf2e1	intron	ENSMUSG00000022828	ProperStrand	16	chr18	32257017	32257044	protein_coding	Iws1	utr3	ENSMUSG00000024384	ProperStrand	72	1	-15.6466
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr4	116991019	116991036	protein_coding	Rnf220	intron	ENSMUSG00000028677	ProperStrand	131	1	-4.3924
chr8	24169015	24169031	protein_coding	Ank1	utr5	ENSMUSG00000031543	ProperStrand	47	chr18	35714144	35714234	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	7	-inf
chr8	87368521	87368554	protein_coding	Calr	exon	ENSMUSG00000003814	ProperStrand	232	chr11	78150285	78150301	protein_coding	Pigs	exon	ENSMUSG00000041958	NonProperStrand	138	1	-8.9324
chr6	125112980	125115312	protein_coding	Gapdh	exon	ENSMUSG00000057666	ProperStrand	356	chr1	162965536	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	6	-5.9588
chr4	124523604	124523704	protein_coding	Mtf1	utr3	ENSMUSG00000028890	ProperStrand	8	chr19	8799834	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-9.0214
chr18	16967315	16967331	protein_coding	Cdh2	utr5	ENSMUSG00000024304	NonProperStrand	19	chr4	116826699	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-9.0964
chr9	56266647	56266665	protein_coding	Hmg20a	utr5	ENSMUSG00000032329	ProperStrand	87	chr16	23111447	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.7924
chr16	57391758	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr3	95980329	95980410	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-1.7659
chr4	32076911	32078708	protein_coding	Map3k7	exon	ENSMUSG00000028284	ProperStrand	16	chr4	131865966	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.1079
chr6	72739086	72739198	protein_coding	Tcf7l1	utr5	ENSMUSG00000055799	ProperStrand	61	chr14	76247796	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	6	-18.8548
chr17	71571467	71571483	protein_coding	Lpin2	exon	ENSMUSG00000024052	ProperStrand	18	chr8	129468746	129468797	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-6.7854
chr2	59537475	59562725	protein_coding	Tanc1	exon	ENSMUSG00000035168	ProperStrand	80	chr11	5180669	5180685	protein_coding	Znrf3	utr3	ENSMUSG00000041961	NonProperStrand	210	1	-10.2227
chr3	98023351	98023367	LINE	Lx9	L1	chr3Lx998023319	ProperStrand	23	chr19	8798484	8798513	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-7.1123
chr19	16800134	16800151	protein_coding	Vps13a	exon	ENSMUSG00000046230	NonProperStrand	8	chr19	8798748	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-8.8700
chr4	154531565	154532081	protein_coding	Ski	exon	ENSMUSG00000029050	ProperStrand	28	chr2	26494709	26494761	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.5336
chr3	8984080	9004601	protein_coding	Tpd52	intron	ENSMUSG00000027506	ProperStrand	37	chr3	123210852	123210979	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-7.4860
chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr4	138908553	138987560	protein_coding	Ubr4	exon	ENSMUSG00000066036	ProperStrand	304	2	-1.9455
chr9	107467912	107467962	protein_coding	Tusc2	utr3	ENSMUSG00000010054	ProperStrand	2	chr2	11400811	11400829	protein_coding	Pfkfb3	intron	ENSMUSG00000026773	ProperStrand	27	1	-21.0126
chr7	109305674	109309132	protein_coding	Nup98	utr5	ENSMUSG00000063550	ProperStrand	100	chr16	23111777	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-3.5844
chr17	25035346	25035419	protein_coding	Mapk8ip3	utr3	ENSMUSG00000024163	ProperStrand	10	chr4	131908812	131908890	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-10.8073
chr10	31328220	31328236	protein_coding	Rnf217	exon	ENSMUSG00000063760	ProperStrand	33	chr7	52382236	52382314	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-9.4862
chr7	67123693	67123759	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	chr11	74718963	74719010	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	1	-5.3002
chr5	112865460	112865478	protein_coding	Sez6l	exon	ENSMUSG00000058153	ProperStrand	81	chr5	74489596	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	2	-5.5335
chr10	127575025	127575198	protein_coding	Rbms2	exon	ENSMUSG00000040043	ProperStrand	26	chrX	143918841	143918931	snoRNA	ENSMUSG00000084421_SNORA35	.	ENSMUSG00000084421	ProperStrand	293	2	-18.3548
chr3	85943028	85943071	protein_coding	Rps3a	exon	ENSMUSG00000028081	ProperStrand	177	chr13	90238646	90238724	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	3	-14.7788
chr12	21312712	21313880	protein_coding	Cpsf3	exon	ENSMUSG00000054309	ProperStrand	24	chr19	8963027	8963124	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	6	-19.9912
chr7	133938944	133939132	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	chr5	149860448	149861341	protein_coding	Hmgb1	exon	ENSMUSG00000066551	ProperStrand	99	5	-19.8036
chr2	129998643	129998665	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr3	69400290	69400333	protein_coding	B3galnt1	intron	ENSMUSG00000043300	ProperStrand	3	1	-14.4862
chr2	90235304	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr14	60998023	60998039	protein_coding	Fam123a	exon	ENSMUSG00000021986	ProperStrand	13	1	-7.5011
chr18	74785354	74786835	protein_coding	Myo5b	exon	ENSMUSG00000025885	ProperStrand	28	chr16	23110829	23110860	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.1386
chr2	158182202	158182277	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	chr1	59748784	59748856	snoRNA	ENSMUSG00000077345_Snord70	.	ENSMUSG00000077345	ProperStrand	61	3	-11.7342
chr2	121923006	121923052	protein_coding	Spg11	exon	ENSMUSG00000033396	ProperStrand	32	chr17	24665424	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-6.1741
chrX	133606630	133606658	protein_coding	Fam199x	exon	ENSMUSG00000042595	ProperStrand	2	chr2	158182155	158182199	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	2	-inf
chr5	74489202	74489288	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr1	193152107	193152123	protein_coding	Tmem206	exon	ENSMUSG00000026627	ProperStrand	2	1	-13.0481
chr6	47738068	47738106	misc_RNA	Y_RNA	.	ENSMUSG00000065701	ProperStrand	129	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	4	-12.2786
chr6	28695290	28745936	protein_coding	Snd1	exon	ENSMUSG00000001424	ProperStrand	210	chr18	64757136	64757156	protein_coding	Atp8b1	intron	ENSMUSG00000039529	ProperStrand	782	1	-5.7015
chr11	68887028	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	NonProperStrand	12	chr18	35714192	35714282	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	NonProperStrand	47	1	-17.2326
chr4	140121137	140121153	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	chr7	150717298	150717352	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-3.9388
chr4	55431652	55431669	lincRNA	Gm12505	exon	ENSMUSG00000087070	ProperStrand	447	chr3	137754137	137755583	protein_coding	Mttp	exon	ENSMUSG00000028158	ProperStrand	13	4	-inf
chr17	4082213	4082261	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr4	116828379	116828436	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-5.0890
chr9	44447701	44447748	protein_coding	Ddx6	utr3	ENSMUSG00000032097	ProperStrand	59	chr17	35087897	35087965	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-5.2328
chr3	87718110	87718419	protein_coding	Hdgf	exon	ENSMUSG00000004897	ProperStrand	117	chr19	8799844	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-3.6810
chr17	39985543	39985727	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr17	35089181	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	9	-5.0628
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr1	192712615	192712631	protein_coding	Rps6kc1	exon	ENSMUSG00000089872	ProperStrand	241	1	-6.1661
chr16	13568008	13568100	protein_coding	Parn	intron	ENSMUSG00000022685	ProperStrand	30	chr2	166719081	166719114	protein_coding	Arfgef2	exon	ENSMUSG00000074582	ProperStrand	32	3	-20.4006
chr10	127020511	127020887	protein_coding	Lrp1	exon	ENSMUSG00000040249	NonProperStrand	24	chr14	31827501	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-8.7851
chr1	183766323	183766391	protein_coding	Lbr	exon	ENSMUSG00000004880	ProperStrand	97	chr2	126472468	126472484	protein_coding	Gabpb1	exon	ENSMUSG00000027361	ProperStrand	54	1	-12.5616
chr11	97102285	97103145	protein_coding	Npepps	exon	ENSMUSG00000001441	ProperStrand	30	chr16	37777391	37777408	protein_coding	Fstl1	exon	ENSMUSG00000022816	ProperStrand	179	1	-12.5217
chr4	61762922	61763012	SINE	B3A	B2	chr4B3A61762925	ProperStrand	1	chr5	117660450	117660540	protein_coding	Taok3	intron	ENSMUSG00000061288	ProperStrand	28	1	-inf
chr15	95446121	95446137	LTR	RMER19B	ERVK	chr15RMER19B95445803	ProperStrand	7	chrX	7245508	7245568	protein_coding	Plp2	utr3	ENSMUSG00000031146	ProperStrand	88	1	-16.9089
chr7	17423975	17423992	protein_coding	Strn4	exon	ENSMUSG00000030374	ProperStrand	12	chr16	23111770	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-8.1126
chr4	137160453	137160486	protein_coding	Usp48	exon	ENSMUSG00000043411	ProperStrand	135	chr2	26494708	26494768	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.7431
chr8	77593657	77593673	protein_coding	Tom1	utr3	ENSMUSG00000042870	ProperStrand	30	chr9	15119631	15119693	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.8898
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr5	115939496	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-1.4502
chr10	89122888	89122933	protein_coding	Scyl2	exon	ENSMUSG00000069539	ProperStrand	7	chr16	23110977	23111000	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-6.1472
chr15	22578450	22578467	protein_coding	Cdh18	intron	ENSMUSG00000040420	NonProperStrand	26	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-9.4232
chr8	83138165	83138182	protein_coding	Frem3	exon	ENSMUSG00000042353	NonProperStrand	53	chr19	8800084	8800128	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-7.8559
chr12	4826708	4826808	protein_coding	0610009D07Rik	intron	ENSMUSG00000037361	ProperStrand	3	chr7	29136617	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-8.4253
chrX	20257910	20257927	protein_coding	Uba1	exon	ENSMUSG00000001924	ProperStrand	156	chr19	8798484	8798516	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-3.4046
chr11	6428059	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr4	116827118	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	13	-3.9371
chr18	73818536	73822385	protein_coding	Smad4	exon	ENSMUSG00000024515	ProperStrand	51	chr8	129468784	129468864	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-4.7254
chr4	155206652	155206712	protein_coding	Aurkaip1	exon	ENSMUSG00000065990	ProperStrand	7	chr3	123210854	123210870	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-14.7830
chr6	57702584	57702635	protein_coding	Vopp1	utr3	ENSMUSG00000037788	ProperStrand	6	chr17	13112510	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	4	-18.9463
chr16	8660428	8660508	protein_coding	Carhsp1	utr3	ENSMUSG00000008393	ProperStrand	15	chr5	130300426	130300516	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-8.4841
chr14	79382053	79382143	protein_coding	1300010F03Rik	exon	ENSMUSG00000058997	ProperStrand	29	chr10	110918549	110918629	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-4.8269
chr11	102294588	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr9	15119631	15119969	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	10	-5.8929
chr16	32381736	32384874	protein_coding	Ubxn7	exon	ENSMUSG00000053774	ProperStrand	30	chr1	162967510	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	8	-inf
chr2	31907315	31907729	protein_coding	Nup214	utr3	ENSMUSG00000001855	ProperStrand	62	chr9	120037989	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	2	-7.7044
chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr1	58228679	58228696	protein_coding	Aox3	exon	ENSMUSG00000064294	ProperStrand	39	1	-7.3115
chr3	159218876	159218966	LINE	Lx6	L1	chr3Lx6159214747	ProperStrand	1	chr7	54443175	54443255	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-inf
chrX	156557553	156557609	protein_coding	Map3k15	exon	ENSMUSG00000031303	ProperStrand	26	chr8	98269966	98270066	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-7.2018
chr15	77597977	77597993	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr11	62416950	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-1.9155
chr11	70467574	70467593	protein_coding	Pfn1	intron	ENSMUSG00000018293	ProperStrand	55	chr11	115935746	115937022	protein_coding	Unc13d	exon	ENSMUSG00000057948	ProperStrand	89	1	-12.6973
chr5	130499719	130499799	protein_coding-noncoding	Asl	utr3	ENSMUSG00000025533	NonProperStrand	1	chr5	130499893	130499983	protein_coding	Asl	utr5	ENSMUSG00000025533	NonProperStrand	4	1	-inf
chr2	139986172	139986189	protein_coding	Esf1	exon	ENSMUSG00000045624	NonProperStrand	3	chr3	123210883	123210979	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-8.0648
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr17	35089181	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	3	-1.7034
chr6	148874557	148874628	protein_coding	Fam60a	exon	ENSMUSG00000039985	ProperStrand	68	chr18	33954853	33954899	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	3	-8.2439
chr4	43508586	43508605	protein_coding	Ccdc107	exon	ENSMUSG00000028461	ProperStrand	69	chr5	121655017	121655155	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.4890
chr6	117795659	117795676	protein_coding	Zfp637	exon	ENSMUSG00000059689	NonProperStrand	53	chr11	97643019	97643078	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.6858
chr4	32826946	32827361	protein_coding	Mdn1	exon	ENSMUSG00000058006	ProperStrand	184	chr1	63225596	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-4.4861
chr11	94158478	94159169	protein_coding	Luc7l3	exon	ENSMUSG00000020863	ProperStrand	38	chr4	129662259	129662276	protein_coding	Bai2	utr5	ENSMUSG00000028782	ProperStrand	119	1	-12.8603
chr16	32632098	32632196	protein_coding	Tfrc	utr3	ENSMUSG00000022797	ProperStrand	71	chr4	131866240	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-3.3554
chr3	105711408	105711424	protein_coding	Adora3	utr3	ENSMUSG00000000562	ProperStrand	2	chr16	23111706	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-8.9529
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr5	141096899	141096972	protein_coding	Ttyh3	utr3	ENSMUSG00000036565	ProperStrand	22	1	-10.6339
chr15	96247375	96249419	protein_coding	Scaf11	exon	ENSMUSG00000033228	ProperStrand	37	chr10	23505152	23505253	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-3.5654
chr13	107845717	107845737	DNA	MER115	Tip100	chr13MER115107845715	ProperStrand	1	chr17	13112465	13112528	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-inf
chr14	31378789	31378817	protein_coding	Tkt	exon	ENSMUSG00000021957	ProperStrand	160	chr3	108228259	108228275	protein_coding	Sars	utr3	ENSMUSG00000068739	NonProperStrand	200	1	-8.9331
chr19	58920546	58920564	protein_coding	Hspa12a	intron	ENSMUSG00000025092	NonProperStrand	17	chr11	97643042	97643091	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.8122
chr2	125573198	125573237	protein_coding	Secisbp2l	exon	ENSMUSG00000035093	ProperStrand	26	chr8	96057086	96057103	protein_coding	Ces5a	intron	ENSMUSG00000058019	ProperStrand	1	1	-inf
chr13	75905593	75905652	snoRNA	ENSMUSG00000077449_SNORA42	.	ENSMUSG00000077449	ProperStrand	26	chr17	24857724	24857814	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.7951
chr6	115755618	115755699	protein_coding	Rpl32	exon	ENSMUSG00000057841	ProperStrand	137	chr17	24857750	24857840	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.0609
chr7	134671438	134671518	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	chr7	52381973	52381998	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-1.7135
chr19	17273623	17273678	protein_coding	Prune2	exon	ENSMUSG00000039126	ProperStrand	49	chr15	98350163	98350253	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-5.1527
chr5	136259285	136259314	protein_coding	Mdh2	exon	ENSMUSG00000019179	ProperStrand	50	chr3	88715213	88715230	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-7.5979
chr19	21906535	21906619	protein_coding	Tmem2	exon	ENSMUSG00000024754	ProperStrand	133	chr3	123210912	123210929	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-0.9235
chr4	86703797	86703877	protein_coding	Slc24a2	intron	ENSMUSG00000037996	ProperStrand	1	chr5	74735252	74735342	protein_coding	Scfd2	intron	ENSMUSG00000062110	NonProperStrand	3	1	-inf
chr15	5068441	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	chr1	9932548	9932626	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	2	-2.2127
chr19	25748133	25748151	protein_coding	Dmrt2	exon	ENSMUSG00000048138	ProperStrand	2	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-14.6571
chr13	9833561	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr4	141765972	141766072	protein_coding	Kazn	exon	ENSMUSG00000040606	ProperStrand	123	1	-3.5960
chr3	113827103	113827119	protein_coding	Col11a1	utr3	ENSMUSG00000027966	NonProperStrand	139	chr7	117189863	117189917	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-4.5763
chr5	100464674	100464774	protein_coding	Hnrpdl	utr3	ENSMUSG00000029328	ProperStrand	39	chr13	23492662	23492698	tRNA	tRNA966-AlaAGC	.	1252087	ProperStrand	20	1	-16.3721
chr7	128061774	128061791	protein_coding	Polr3e	intron	ENSMUSG00000030880	ProperStrand	43	chr7	108034356	108038998	protein_coding	Arhgef17	exon	ENSMUSG00000032875	ProperStrand	33	1	-15.1950
chrX	102569259	102569275	lincRNA	5330434G04Rik	exon	ENSMUSG00000087620	ProperStrand	29	mmu-miR-6238	2	20	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	1	-12.0040
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr6	34830669	34830747	protein_coding	Wdr91	utr3	ENSMUSG00000058486	ProperStrand	15	1	-11.7433
chr2	113933513	113933531	protein_coding	Aqr	intron	ENSMUSG00000040383	ProperStrand	70	chr9	120039622	120039670	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.0403
chr9	63066908	63066926	protein_coding	Map2k5	intron	ENSMUSG00000058444	NonProperStrand	79	chr16	23110842	23110999	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-0.8955
chrX	71518296	71518349	protein_coding	Rpl10	exon	ENSMUSG00000008682	ProperStrand	71	chr17	13112468	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	7	-19.4731
chr4	108278918	108278934	protein_coding	Orc1	exon	ENSMUSG00000028587	ProperStrand	161	chr7	29136525	29136578	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-0.9114
chr2	157854273	157854289	protein_coding	Rprd1b	utr5	ENSMUSG00000027651	ProperStrand	33	chr19	8963087	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.3267
chr8	125006377	125021387	protein_coding	Fam38a	exon	ENSMUSG00000014444	ProperStrand	132	chr3	123210854	123210968	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-1.8632
chr5	136611800	136611816	protein_coding	Lrwd1	exon	ENSMUSG00000029703	NonProperStrand	51	chr9	83678800	83681879	protein_coding	Elovl4	exon	ENSMUSG00000032262	ProperStrand	159	1	-11.6851
chr1	10141947	10143475	protein_coding	Arfgef1	exon	ENSMUSG00000067851	NonProperStrand	27	chr7	150717348	150717425	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-7.0905
chr5	118530211	118530232	protein_coding	Fbxw8	intron	ENSMUSG00000032867	NonProperStrand	3	chr9	78326559	78326600	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-12.6763
chr2	94253760	94253850	protein_coding	Api5	utr3	ENSMUSG00000027193	ProperStrand	51	chr9	15119648	15119728	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.9150
chr3	9425821	9425839	lincRNA	C030034L19Rik	intron	ENSMUSG00000085362	ProperStrand	3	chr19	8963031	8963073	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-8.3179
chr3	88811703	88811720	protein_coding	Ash1l	exon	ENSMUSG00000028053	ProperStrand	30	chr1	162968492	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-7.4593
chr1	184206244	184206264	protein_coding	Degs1	utr3	ENSMUSG00000038633	ProperStrand	19	chr11	77996558	77996622	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	4	-19.9787
chrX	152009278	152009294	protein_coding	Ptchd1	exon	ENSMUSG00000041552	NonProperStrand	294	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-4.6251
chr2	91436227	91436336	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	chr7	29136525	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	20	-7.1778
chr4	76614453	76614470	protein_coding	Ptprd	intron	ENSMUSG00000028399	ProperStrand	198	chr11	69483212	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-0.7329
chr16	17427441	17427461	protein_coding	Snap29	intron	ENSMUSG00000022765	ProperStrand	2	chr19	8963031	8963085	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-9.4105
chr18	58286613	58286630	protein_coding	Fbn2	intron	ENSMUSG00000024598	NonProperStrand	12	chr13	44964940	44965030	protein_coding	Jarid2	intron	ENSMUSG00000038518	ProperStrand	372	1	-12.9403
chr17	23744094	23744202	protein_coding	Zscan10	exon	ENSMUSG00000023902	ProperStrand	9	chr8	13876179	13876226	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-11.0158
chr17	39980044	39980074	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr15	79129331	79129347	protein_coding	Pla2g6	intron	ENSMUSG00000042632	NonProperStrand	9	1	-11.0962
chr13	96374713	96374729	protein_coding	F2r	exon	ENSMUSG00000048376	NonProperStrand	88	chr2	130101241	130101308	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-5.8364
chr5	35190168	35190221	protein_coding	Htt	exon	ENSMUSG00000029104	ProperStrand	73	chr17	6138911	6138928	protein_coding	Tulp4	exon	ENSMUSG00000034377	ProperStrand	164	1	-10.9014
chr2	153143173	153143189	protein_coding	Kif3b	exon	ENSMUSG00000027475	NonProperStrand	24	chr4	56910496	56910591	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	2	-12.7168
chr9	64024477	64024557	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	chr12	92811866	92811956	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	3	-9.1798
chr2	26493427	26493517	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr15	88989990	88990070	protein_coding	Plxnb2	exon	ENSMUSG00000036606	ProperStrand	119	1	-4.8594
chr11	60966547	60966574	protein_coding	Usp22	utr3	ENSMUSG00000042506	ProperStrand	75	chrX	71517859	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-6.1049
chr13	114158531	114158560	protein_coding	BC067074	exon	ENSMUSG00000021763	ProperStrand	14	chr8	129468818	129468875	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	2	-11.8059
chr2	125177512	125177530	protein_coding	Fbn1	exon	ENSMUSG00000027204	ProperStrand	38	chrX	71517859	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	4	-21.9596
chr3	108228259	108228275	protein_coding	Sars	utr3	ENSMUSG00000068739	NonProperStrand	200	chr11	106362609	106362638	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-5.0397
chr19	5801220	5801295	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr2	32818904	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	4	-3.4978
chr11	115646767	115646808	protein_coding	2310067B10Rik	exon	ENSMUSG00000020747	ProperStrand	74	chr7	117166822	117166858	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-4.4139
chr11	100414998	100415014	protein_coding	Ttc25	exon	ENSMUSG00000006784	NonProperStrand	119	chr5	130300468	130300530	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.4233
chr14	120419873	120419889	protein_coding	Oxgr1	utr3	ENSMUSG00000044819	ProperStrand	8	chr10	36856214	36856342	protein_coding	Marcks	exon	ENSMUSG00000069662	ProperStrand	17	2	-19.8251
chr15	99232077	99240259	protein_coding	Tmbim6	utr3	ENSMUSG00000023010	ProperStrand	64	chr16	23110852	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	9	-8.2174
chr2	75504500	75504522	protein_coding	Hnrnpa3	utr3	ENSMUSG00000059005	ProperStrand	289	chr3	68889026	68889140	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	4	-4.0349
chr3	94684096	94684186	protein_coding	Pogz	exon	ENSMUSG00000038902	ProperStrand	65	chr8	129468783	129468863	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	17	-20.0965
chr11	98936474	98936490	protein_coding	Tns4	exon	ENSMUSG00000017607	NonProperStrand	4	chr4	131865929	131865966	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.0048
chr19	5761660	5761780	protein_coding	Scyl1	exon	ENSMUSG00000024941	ProperStrand	59	chr2	166890839	166890858	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	5	-19.0287
chr5	120889875	120889892	protein_coding	Lhx5	intron	ENSMUSG00000029595	NonProperStrand	106	chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	1	-9.4769
chr17	32453268	32453285	protein_coding	Akap8	exon	ENSMUSG00000024045	ProperStrand	339	chr2	155919192	155919331	protein_coding	Rbm12	utr3	ENSMUSG00000089824	ProperStrand	26	1	-11.5347
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr5	115777192	115777239	protein_coding	Srsf9	utr5	ENSMUSG00000029538	ProperStrand	19	1	-8.6788
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr11	70800375	70800391	protein_coding	Dhx33	utr3	ENSMUSG00000040620	NonProperStrand	14	1	-11.6747
chr10	12877497	12877516	protein_coding	Fam164b	intron	ENSMUSG00000019815	NonProperStrand	2	chr4	131908753	131908810	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-8.0336
chr11	78118269	78118285	protein_coding	Spag5	exon	ENSMUSG00000002055	ProperStrand	49	chr6	70794803	70794819	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	1	-11.8304
chr2	173604446	173604517	protein_coding	Vapb	utr3	ENSMUSG00000054455	ProperStrand	29	chr16	23110454	23110544	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.7712
chr15	81756270	81756385	protein_coding	Polr3h	utr5	ENSMUSG00000022476	ProperStrand	11	chr3	89750435	89750451	protein_coding	Atp8b2	exon	ENSMUSG00000060671	ProperStrand	140	1	-15.0676
chr9	103247235	103248095	protein_coding	Topbp1	exon	ENSMUSG00000032555	ProperStrand	81	chr4	131908264	131908431	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-3.2502
chr16	50732845	50732863	protein_coding	5330426P16Rik	utr5	ENSMUSG00000022639	NonProperStrand	1	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-inf
chr13	101541068	101541087	protein_coding	Cenph	intron	ENSMUSG00000045273	NonProperStrand	45	chr7	117189864	117189932	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-6.7795
chr16	37834071	37834096	protein_coding	Fstl1	utr3	ENSMUSG00000022816	ProperStrand	179	chr14	121319241	121319331	protein_coding	Ipo5	exon	ENSMUSG00000030662	ProperStrand	135	4	-19.8921
chr5	123610651	123610699	protein_coding	Setd1b	exon	ENSMUSG00000038384	ProperStrand	11	chr7	134671400	134671490	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-11.3278
chr15	55089240	55089308	protein_coding	Deptor	utr3	ENSMUSG00000022419	ProperStrand	17	chr1	157891377	157891407	protein_coding	Tor1aip2	intron	ENSMUSG00000050565	ProperStrand	31	1	-17.1598
chr7	149170854	149171340	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	chr14	76372330	76372420	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	1	-6.9397
chr2	91436262	91436335	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	chr15	79908939	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	5	-4.6991
chr7	140161198	140161298	protein_coding	Zranb1	intron	ENSMUSG00000030967	ProperStrand	13	chr7	117189993	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-6.3017
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr4	117898846	117898965	protein_coding	Ptprf	exon	ENSMUSG00000033295	ProperStrand	337	1	-5.4903
chr1	4859842	4859899	protein_coding	Lypla1	intron	ENSMUSG00000025903	ProperStrand	12	chr16	23110871	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.4686
chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	chr7	13516167	13516203	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	1	-5.6673
chr6	38508611	38508664	protein_coding	Luc7l2	intron	ENSMUSG00000029823	ProperStrand	85	chr1	87983873	87983963	snoRNA	ENSMUSG00000077274_SNORA26	.	ENSMUSG00000077274	ProperStrand	361	1	-9.0198
chr6	86619040	86619056	protein_coding	Mxd1	utr5	ENSMUSG00000001156	NonProperStrand	40	chr10	80255234	80255305	protein_coding	Dot1l	exon	ENSMUSG00000061589	ProperStrand	48	1	-14.5831
chr8	109818077	109818094	protein_coding	Nfat5	intron	ENSMUSG00000003847	ProperStrand	29	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.9946
chr15	81719752	81745102	protein_coding	Aco2	exon	ENSMUSG00000022477	ProperStrand	237	chr16	23110850	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	10	-0.9602
chr19	37419106	37419186	SINE	B1_Mur2	Alu	chr19B1_Mur237419019	ProperStrand	1	chr19	37419220	37419310	SINE	B2_Mm2	B2	chr19B2_Mm237419213	ProperStrand	1	1	-inf
chr3	138108322	138110113	protein_coding	Adh5	exon	ENSMUSG00000028138	ProperStrand	16	chr1	155287308	155287354	snoRNA	ENSMUSG00000064435_SNORA4	.	ENSMUSG00000064435	ProperStrand	263	1	-13.0391
chr11	49984640	49984656	protein_coding	Tbc1d9b	exon	ENSMUSG00000036644	ProperStrand	27	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-7.8155
chr6	112997457	112997557	protein_coding	Thumpd3	exon	ENSMUSG00000030264	ProperStrand	11	chr16	96391562	96391613	protein_coding	Lca5l	intron	ENSMUSG00000045275	NonProperStrand	210	1	-14.2683
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr11	68067261	68067277	protein_coding	Ntn1	intron	ENSMUSG00000020902	NonProperStrand	194	1	-5.4797
chr7	52974978	52976153	protein_coding	Rpl18	exon	ENSMUSG00000059070	ProperStrand	116	chr19	8963027	8963184	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-2.4214
chr8	41513347	41513419	protein_coding	Zdhhc2	intron	ENSMUSG00000039470	ProperStrand	5	chr6	115757995	115758085	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-10.5899
chr17	46680281	46680298	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chrX	54579516	54579532	protein_coding-noncoding	Arhgef6	utr3	ENSMUSG00000031133	NonProperStrand	2	1	-16.7962
chr6	124909879	124909940	protein_coding	Cops7a	exon	ENSMUSG00000030127	ProperStrand	16	chr8	98269959	98269980	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-8.1880
chr4	155236731	155236747	protein_coding	Tas1r3	exon	ENSMUSG00000029072	NonProperStrand	1	chr17	25321911	25321967	pseudogene	BC003965	.	ENSMUSG00000067722	ProperStrand	6	1	-inf
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr12	109460710	109460726	protein_coding	Ccdc85c	intron	ENSMUSG00000084883	ProperStrand	157	1	-6.8013
chr1	66521957	66521973	protein_coding	Unc80	intron	ENSMUSG00000055567	NonProperStrand	212	chr13	90238585	90238623	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	1	-6.1424
chr7	24779190	24779213	SINE	ID_B1	B4	chr7ID_B124779183	NonProperStrand	54	chr10	12902322	12902670	protein_coding	Ltv1	exon	ENSMUSG00000019814	ProperStrand	76	1	-13.0526
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr3	95980330	95980383	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-2.5853
chr11	98297305	98297321	protein_coding	Erbb2	exon	ENSMUSG00000062312	ProperStrand	24	chr16	23111759	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.4982
chr11	78313939	78313956	protein_coding	Vtn	exon	ENSMUSG00000017344	ProperStrand	188	chr17	45706762	45707248	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	1	-4.5049
chr6	124868151	124868167	protein_coding	A230083G16Rik	intron	ENSMUSG00000055818	NonProperStrand	1	chr19	8798741	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-inf
chr14	56159295	56159313	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	chr7	116663634	116663767	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	5	-5.3288
chr7	19591412	19591428	protein_coding	Irf2bp1	exon	ENSMUSG00000044030	NonProperStrand	81	chr1	89673727	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-2.7285
chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	chr4	129784888	129803014	protein_coding	Pef1	exon	ENSMUSG00000028779	ProperStrand	16	2	-18.4837
chr2	27866775	27866791	protein_coding	Col5a1	exon	ENSMUSG00000026837	ProperStrand	35	chr2	166890503	166890561	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-8.6385
chr17	56257328	56257344	LTR	RLTR25B	ERVK	chr17RLTR25B56257276	NonProperStrand	75	chr17	34982690	34982780	protein_coding	Skiv2l	exon	ENSMUSG00000040356	ProperStrand	8	1	-16.9858
chr1	164632509	164634504	protein_coding	Prrc2c	exon	ENSMUSG00000040225	ProperStrand	413	chr2	26493366	26493476	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-0.7234
chr4	117886078	117886146	protein_coding	Ptprf	exon	ENSMUSG00000033295	ProperStrand	337	chr7	117190023	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-1.4568
chr9	55057284	55061717	protein_coding	Fbxo22	exon	ENSMUSG00000032309	ProperStrand	79	chr7	29689668	29690286	protein_coding	Actn4	exon	ENSMUSG00000054808	ProperStrand	120	1	-11.3687
chr11	98773528	98782588	protein_coding	Cdc6	exon	ENSMUSG00000017499	ProperStrand	27	chr4	131908236	131908435	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-4.7684
chr7	57057063	57057149	protein_coding	Prmt3	intron	ENSMUSG00000030505	ProperStrand	89	chr17	24665449	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-4.1866
chr11	58745941	58745960	protein_coding	Rnf187	utr3	ENSMUSG00000020496	ProperStrand	26	chr4	131908815	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-6.7721
chr5	100855911	100855974	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr1	193730797	193730813	protein_coding	Slc30a1	utr5	ENSMUSG00000037434	ProperStrand	42	1	-7.3480
chr7	54103197	54103216	protein_coding-noncoding	Ldha	utr5	ENSMUSG00000063229	ProperStrand	4	chr9	120038562	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	4	-inf
chr11	116713275	116713351	protein_coding	Srsf2	utr3	ENSMUSG00000034120	ProperStrand	132	chr12	112779148	112779238	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-3.2974
chr17	24710438	24710512	protein_coding	Pkd1	exon	ENSMUSG00000032855	ProperStrand	61	chr17	24857717	24857807	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.2692
chr19	9092539	9092629	protein_coding	Ahnak	exon	ENSMUSG00000069833	ProperStrand	103	chr5	130300421	130300501	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.6356
chr2	22444360	22445128	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	chr11	69481334	69481473	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	8	-2.6123
chr17	27559700	27559717	protein_coding	Grm4	utr3	ENSMUSG00000063239	ProperStrand	147	chr4	131866153	131866292	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	4	-7.8544
chr2	164257636	164257652	protein_coding	Sdc4	intron	ENSMUSG00000017009	ProperStrand	177	chr19	6374191	6374220	protein_coding	Sf1	exon	ENSMUSG00000024949	ProperStrand	251	1	-8.2794
chr11	102664975	102665011	protein_coding-noncoding	Gjc1	utr3	ENSMUSG00000034520	ProperStrand	2	chr16	23109046	23109087	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-14.7417
chr11	113522987	113523010	protein_coding	D11Wsu99e	utr3	ENSMUSG00000041629	ProperStrand	28	chr8	87525135	87525238	protein_coding	Hook2	exon	ENSMUSG00000052566	ProperStrand	204	1	-12.4011
chr9	26440743	26440759	DNA	MER5A	MER1_type	chr9MER5A26440741	ProperStrand	108	chr2	32563527	32563545	protein_coding	Cdk9	exon	ENSMUSG00000009555	NonProperStrand	49	1	-12.5414
chr11	120818192	120818244	protein_coding	Slc16a3	exon	ENSMUSG00000025161	ProperStrand	98	chr11	97642955	97643014	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.6774
chr2	180836524	180836542	protein_coding	Kcnq2	intron	ENSMUSG00000016346	ProperStrand	5	chr4	131865866	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-6.5022
chr2	23011328	23011344	protein_coding	Mastl	exon	ENSMUSG00000026779	ProperStrand	60	chr11	6519867	6519913	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-7.9426
chr2	90235291	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr13	94957641	94957657	protein_coding	Lhfpl2	intron	ENSMUSG00000045312	ProperStrand	37	2	-8.8678
chr11	115451723	115451739	protein_coding	Gga3	exon	ENSMUSG00000020740	NonProperStrand	50	chr8	122044247	122044953	protein_coding	Mbtps1	exon	ENSMUSG00000031835	ProperStrand	81	1	-13.0793
chr14	22667332	22667495	protein_coding	Comtd1	exon	ENSMUSG00000021773	ProperStrand	3	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	1	-13.3845
chr6	21936829	21936845	lincRNA	Gm17429	exon	ENSMUSG00000090888	ProperStrand	4	chr11	106362638	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-13.0688
chr6	72310104	72310121	protein_coding	Rnf181	utr3	ENSMUSG00000055850	NonProperStrand	7	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-7.5326
chr7	127897734	127897758	protein_coding	Vwa3a	intron	ENSMUSG00000030889	NonProperStrand	4	chr4	131865939	131865982	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.0048
chr18	38011260	38013015	protein_coding	Diap1	exon	ENSMUSG00000024456	ProperStrand	77	chr5	92485102	92485182	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	1	-8.2400
chr12	3968611	3968627	protein_coding	Efr3b	exon	ENSMUSG00000020658	ProperStrand	142	chr14	55264536	55264554	protein_coding	Acin1	exon	ENSMUSG00000022185	ProperStrand	67	1	-11.3622
chr11	11867679	11870432	protein_coding	Grb10	exon	ENSMUSG00000020176	NonProperStrand	159	chr16	36898714	36898761	protein_coding	Golgb1	exon	ENSMUSG00000034243	ProperStrand	92	1	-10.4988
chr4	131399490	131399506	protein_coding	Mecr	exon	ENSMUSG00000028910	NonProperStrand	109	chr5	108336372	108336462	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-3.7488
chr17	34089172	34089213	protein_coding	Rps18	exon	ENSMUSG00000008668	ProperStrand	111	chr6	42626864	42626927	protein_coding	Fam115a	exon	ENSMUSG00000036667	ProperStrand	13	1	-15.1855
chr4	131865877	131865977	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr7	106631294	106631332	snoRNA	ENSMUSG00000065822_Snord15a	.	ENSMUSG00000065822	ProperStrand	128	2	-1.5478
chr4	68423441	68423457	protein_coding	Dbc1	exon	ENSMUSG00000028351	ProperStrand	78	chr9	120038552	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.5779
chrX	102435943	102435962	LINE	Lx8	L1	chrXLx8102435886	ProperStrand	1	chr13	55414393	55414455	protein_coding	Nsd1	exon	ENSMUSG00000021488	ProperStrand	186	1	-inf
chr7	29544988	29545004	protein_coding	Nfkbib	exon	ENSMUSG00000030595	NonProperStrand	1	chr9	120038461	120038552	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-inf
chr8	121685224	121685241	protein_coding	Cdh13	intron	ENSMUSG00000031841	NonProperStrand	17	chr5	130300419	130300465	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.8548
chr2	127984695	127984755	protein_coding	Bcl2l11	utr3	ENSMUSG00000027381	ProperStrand	5	chr5	112865460	112865478	protein_coding	Sez6l	exon	ENSMUSG00000058153	ProperStrand	81	1	-17.7110
chr12	3964977	3965067	protein_coding	Efr3b	utr3	ENSMUSG00000020658	ProperStrand	142	chr7	29136544	29136624	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	6	-8.3067
chr19	3904233	3904250	protein_coding	Tcirg1	exon	ENSMUSG00000001750	ProperStrand	77	chr4	116826699	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-6.2880
chr14	63287574	63287613	protein_coding	Serpine3	intron	ENSMUSG00000091155	ProperStrand	210	chr2	26494708	26494808	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	3	-3.4674
chr17	32335126	32335175	protein_coding	Brd4	exon	ENSMUSG00000024002	ProperStrand	121	chr7	148634702	148634792	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	4	-9.5565
chr19	42021530	42022216	protein_coding	Mms19	exon	ENSMUSG00000025159	ProperStrand	52	chr7	29136635	29136653	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.6097
chr15	66761599	66761653	protein_coding	Ndrg1	utr3	ENSMUSG00000005125	ProperStrand	35	chr12	80182517	80182537	protein_coding	Plekhh1	utr3	ENSMUSG00000060716	ProperStrand	24	1	-16.2740
chr3	138114431	138116755	protein_coding	Adh5	exon	ENSMUSG00000028138	ProperStrand	16	chr17	35088957	35088995	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-8.5211
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr19	9052460	9052522	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	3	-12.8879
chr17	79335379	79336286	protein_coding	Cebpz	exon	ENSMUSG00000024081	ProperStrand	14	chr16	23110556	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.1866
chr8	67206504	67206604	protein_coding	Sc4mol	exon	ENSMUSG00000031604	ProperStrand	24	chr4	129304602	129304642	protein_coding	Txlna	utr3	ENSMUSG00000053841	ProperStrand	37	1	-16.1573
chr14	52816779	52816795	protein_coding	Supt16h	exon	ENSMUSG00000035726	ProperStrand	193	chr2	22444604	22444653	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-5.4715
chr19	37975774	37975848	protein_coding	Myof	exon	ENSMUSG00000048612	ProperStrand	37	chr7	29136532	29136632	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.2150
chr17	30772308	30772324	protein_coding	Dnahc8	utr5	ENSMUSG00000033826	ProperStrand	246	chr7	117166722	117166780	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-2.2503
chr11	87172190	87172206	protein_coding	Ppm1e	exon	ENSMUSG00000046442	ProperStrand	112	chr2	158185576	158185613	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-5.2623
chr5	99443584	99443601	protein_coding	Prkg2	intron	ENSMUSG00000029334	NonProperStrand	57	chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-6.5558
chr13	23622970	23623042	protein_coding	Hist1h4h	utr5	ENSMUSG00000060981	ProperStrand	30	chr16	23111436	23111466	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.3326
chr7	34987262	34987303	protein_coding	Gpi1	utr3	ENSMUSG00000036427	ProperStrand	288	chr4	32673030	32673049	protein_coding	Bach2	utr3	ENSMUSG00000040270	NonProperStrand	16	1	-12.8561
chr10	126497183	126497200	protein_coding	March9	utr5	ENSMUSG00000040502	ProperStrand	25	chr18	35716684	35716761	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-9.2831
chr9	60719914	60719930	protein_coding	Uaca	exon	ENSMUSG00000034485	ProperStrand	109	chr5	116013320	116013374	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	1	-8.9519
chr11	70420867	70420906	protein_coding	Mink1	exon	ENSMUSG00000020827	ProperStrand	113	chr2	158182205	158182295	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-3.7991
chr3	63116100	63116190	protein_coding	Mme	intron	ENSMUSG00000027820	ProperStrand	10	chr11	69483201	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-5.8555
chr11	69730268	69730935	protein_coding	Eif5a	utr3	ENSMUSG00000078812	ProperStrand	164	chr18	35716809	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-1.5543
chr2	179659143	179659160	protein_coding	Taf4a	exon	ENSMUSG00000039117	NonProperStrand	8	chr1	24621275	24621329	protein_coding	Gm10925	utr3	ENSMUSG00000090378	ProperStrand	320	1	-14.0947
chr13	97896863	97896889	protein_coding	Fam169a	exon	ENSMUSG00000041817	ProperStrand	12	chr18	75160711	75160776	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	1	-12.4679
chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	chr14	57289744	57289791	protein_coding	Mphosph8	intron	ENSMUSG00000079184	ProperStrand	29	1	-9.6433
chr7	152494045	152494062	protein_coding	Mrgprf	exon	ENSMUSG00000031070	NonProperStrand	6	chr19	8800375	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	3	-18.8082
chr15	51674152	51696925	protein_coding	Eif3h	exon	ENSMUSG00000022312	ProperStrand	45	chr5	121655035	121655135	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.2899
chr2	83693562	83693578	protein_coding	Fam171b	exon	ENSMUSG00000048388	NonProperStrand	175	chr17	24665420	24665442	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-2.9459
chr1	87983862	87983952	protein_coding	Psmd1	intron	ENSMUSG00000026229	ProperStrand	664	chr11	120209302	120209382	protein_coding	Actg1	exon	ENSMUSG00000062825	ProperStrand	178	1	-6.3448
chr11	95136686	95136738	protein_coding	Myst2	utr3	ENSMUSG00000038909	ProperStrand	56	chr9	64023701	64023746	snoRNA	ENSMUSG00000064918_SNORD18	.	ENSMUSG00000064918	ProperStrand	370	2	-15.4714
chr17	34042580	34042596	lincRNA	BC033916	exon	ENSMUSG00000092349	ProperStrand	19	chr13	46765448	46765470	protein_coding	C78339	exon	ENSMUSG00000069237	ProperStrand	8	1	-18.8166
chr1	162968212	162968289	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	chr10	23505559	23505621	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	2	-2.8815
chr8	129468789	129468879	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	chr9	15118532	15118550	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	2	-2.1134
chr6	71935052	71935142	LTR	RMER17C	ERVK	chr6RMER17C71934971	ProperStrand	6	chr12	106269284	106269335	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	6	-inf
chr8	127992103	127992164	protein_coding	Sipa1l2	exon	ENSMUSG00000001995	ProperStrand	37	chr7	52116509	52116526	protein_coding	Pnkp	intron	ENSMUSG00000002963	NonProperStrand	7	1	-18.4270
chr14	49807504	49807540	protein_coding	Naa30	utr3	ENSMUSG00000036282	ProperStrand	13	chr18	35714256	35714290	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-6.4211
chr4	122975003	122975111	protein_coding	Pabpc4	exon	ENSMUSG00000011257	ProperStrand	85	chr10	26766750	26766771	protein_coding	Lama2	intron	ENSMUSG00000019899	NonProperStrand	36	1	-13.6463
chr8	98248542	98249950	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	chr18	36885433	36885449	protein_coding	Cd14	exon	ENSMUSG00000051439	ProperStrand	65	1	-9.8295
chr7	134671387	134671521	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	chr7	29136526	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	8	-0.9589
chr1	173996736	173996836	protein_coding	Ncstn	utr3	ENSMUSG00000003458	ProperStrand	20	chr10	23505551	23505618	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-9.7671
chr1	120355713	120355803	snRNA	ENSMUSG00000080542_U4atac	.	ENSMUSG00000080542	ProperStrand	73	chr1	63225608	63225688	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-6.2803
chr18	64663223	64664029	protein_coding	Nars	exon	ENSMUSG00000024587	ProperStrand	97	chr15	34370559	34370639	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-2.6872
chr13	74471842	74474860	protein_coding	Sdha	exon	ENSMUSG00000021577	ProperStrand	70	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	1	-6.7216
chr10	79325457	79325544	protein_coding	Ptbp1	exon	ENSMUSG00000006498	ProperStrand	129	chr6	86731276	86731292	protein_coding	Anxa4	intron	ENSMUSG00000029994	ProperStrand	47	1	-12.2700
chr10	72437415	72437431	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr17	35299507	35299631	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-0.7019
chr7	25706910	25706950	protein_coding	Arhgef1	exon	ENSMUSG00000040940	ProperStrand	13	chr4	131865933	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.5141
chr19	8904382	8905411	protein_coding	Hnrnpul2	exon	ENSMUSG00000071659	ProperStrand	93	chr15	82980192	82980225	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-6.2716
chr5	122009145	122009161	LTR	RMER10B	ERVL	chr5RMER10B122008981	NonProperStrand	44	chr9	120038472	120038551	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.6049
chr4	53530531	53541545	protein_coding	Slc44a1	exon	ENSMUSG00000028412	ProperStrand	38	chr15	98350187	98350273	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	7	-inf
chr13	55105923	55105939	protein_coding	Unc5a	exon	ENSMUSG00000025876	NonProperStrand	96	chr12	82817996	82818043	protein_coding	Map3k9	utr3	ENSMUSG00000042724	ProperStrand	92	1	-11.5103
chr2	119009693	119011449	protein_coding	Dnajc17	exon	ENSMUSG00000034278	ProperStrand	6	chr9	120038564	120038587	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-7.6033
chr18	10052132	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr5	123447391	123447407	lincRNA	A930024E05Rik	exon	ENSMUSG00000056735	ProperStrand	17	1	-11.3584
chr2	28942083	28942115	protein_coding	Ttf1	utr3	ENSMUSG00000026803	ProperStrand	15	chr7	117166764	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	4	-19.6781
chr15	52765874	52765894	LINE	Lx	L1	chr15Lx52765543	ProperStrand	1	chr9	15119649	15119746	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-inf
chr10	82456766	82456784	protein_coding	Chst11	intron	ENSMUSG00000034612	ProperStrand	170	chr7	109147533	109147618	protein_coding	Numa1	exon	ENSMUSG00000066306	ProperStrand	148	1	-9.4130
chr13	100204444	100204461	protein_coding	Mtap1b	utr3	ENSMUSG00000052727	NonProperStrand	20	chr8	73419678	73419778	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-5.2171
chrX	46051001	46051083	protein_coding	Rbmx2	intron	ENSMUSG00000031107	ProperStrand	7	chr7	148634702	148634792	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-8.2990
chr4	118781419	118809703	protein_coding	Slc2a1	utr3	ENSMUSG00000028645	ProperStrand	361	chr16	23110876	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	16	-1.1497
chr1	36380417	36380434	protein_coding	Arid5a	utr3	ENSMUSG00000037447	ProperStrand	3	chr16	23109050	23109090	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-13.6377
chr13	54280821	54280911	LTR	RLTR22_Mur	ERVK	chr13RLTR22_Mur54280842	NonProperStrand	1	chr13	54280578	54280658	SINE	B4A	B4	chr13B4A54280541	ProperStrand	1	1	-inf
chr2	90235315	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	105227394	105227410	protein_coding	Myo7a	exon	ENSMUSG00000030761	ProperStrand	14	1	-7.3487
chr8	73419656	73419785	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	chr8	32260335	32260431	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	26	-0.7215
chr1	187146395	187146485	protein_coding-noncoding	Iars2	utr3	ENSMUSG00000026618	ProperStrand	15	chr8	87580284	87580364	protein_coding	Tnpo2	utr3	ENSMUSG00000031691	ProperStrand	92	15	-inf
chrX	7182489	7182506	protein_coding	Ccdc22	utr5	ENSMUSG00000031143	NonProperStrand	51	chr7	116664870	116664914	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.8322
chr19	44188452	44188542	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr1	133141328	133141345	protein_coding	Rassf5	exon	ENSMUSG00000026430	ProperStrand	73	7	-19.7824
chr1	171900662	171900679	lincRNA	3110045C21Rik	exon	ENSMUSG00000085494	NonProperStrand	9	chr3	68889026	68889148	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	8	-19.5260
chr15	22578450	22578467	protein_coding	Cdh18	intron	ENSMUSG00000040420	NonProperStrand	26	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.1929
chr7	112767242	112767317	protein_coding	Trim3	exon	ENSMUSG00000036989	ProperStrand	11	chr17	13112514	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-7.9692
chr9	107949099	107949138	protein_coding	Ip6k1	utr3	ENSMUSG00000032594	ProperStrand	61	chr7	116662710	116663107	protein_coding	Rpl27a	utr5	ENSMUSG00000046364	ProperStrand	149	1	-11.4542
chr15	78939631	78939647	protein_coding	Micall1	utr5	ENSMUSG00000033039	ProperStrand	48	chr4	131908688	131908748	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.5413
chr8	86775589	86777820	protein_coding	Mri1	exon	ENSMUSG00000004996	ProperStrand	9	chr11	69481335	69481425	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-6.9176
chr5	103854542	103891155	protein_coding	Ptpn13	utr5	ENSMUSG00000034573	NonProperStrand	74	chr7	51505507	51505538	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	1	-8.3603
chr7	109789611	109789627	protein_coding	Olfr554	exon	ENSMUSG00000073971	NonProperStrand	66	chr6	115757992	115758117	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-5.2861
chr2	144412702	144412753	protein_coding	Sec23b	exon	ENSMUSG00000027429	ProperStrand	42	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.3954
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr6	125124243	125124338	protein_coding	Ncapd2	exon	ENSMUSG00000038252	ProperStrand	170	1	-5.7369
chr10	74466074	74466139	protein_coding	Gnaz	intron	ENSMUSG00000040009	ProperStrand	34	chr5	121655130	121655153	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.8293
chr11	45226362	45226382	lincRNA	Gm12162	intron	ENSMUSG00000085476	ProperStrand	2	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	NonProperStrand	91	1	-22.1974
chr9	61220986	61221086	protein_coding	Tle3	utr5	ENSMUSG00000032280	ProperStrand	88	chr11	62418025	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-4.8139
chr10	49338940	49338960	protein_coding	Grik2	intron	ENSMUSG00000056073	ProperStrand	8	chr14	55504369	55504416	protein_coding	Bcl2l2	utr3	ENSMUSG00000089682	NonProperStrand	1	1	-inf
chr15	72926504	72926567	antisense	Eif2c2	.	ENSMUSG00000093631	ProperStrand	28	chr7	109060036	109060084	protein_coding	2400001E08Rik	utr3	ENSMUSG00000030842	ProperStrand	18	3	-19.0504
chr8	113447069	113447164	lincRNA	Gm17642	intron	ENSMUSG00000091270	ProperStrand	2	chr15	48620548	48620565	protein_coding	Csmd3	intron	ENSMUSG00000022311	NonProperStrand	25	1	-20.8701
chr12	112830962	112830978	protein_coding	Mark3	exon	ENSMUSG00000007411	NonProperStrand	22	chrX	84483702	84483754	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-10.2755
chr2	90235303	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	94358891	94358908	SINE	MIRm	MIR	chr8MIRm94358786	ProperStrand	7	1	-8.8025
chr2	78709640	78709657	protein_coding	Ube2e3	intron	ENSMUSG00000027011	NonProperStrand	4	chr5	151755614	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-13.4061
chr19	5801976	5802126	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr9	72816966	72816982	protein_coding	Dyx1c1	exon	ENSMUSG00000092192	ProperStrand	34	1	-8.6840
chr12	93048392	93048452	protein_coding	Sel1l	exon	ENSMUSG00000020964	ProperStrand	27	chr4	131908260	131908350	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-7.1402
chr2	35576119	35576191	protein_coding	Dab2ip	exon	ENSMUSG00000026883	ProperStrand	93	chr4	14809036	14809053	protein_coding	Tmem55a	intron	ENSMUSG00000028221	ProperStrand	28	1	-13.9747
chr18	61146481	61146561	protein_coding	Camk2a	utr3	ENSMUSG00000024617	ProperStrand	3	chr4	131908689	131908779	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-12.0505
chr2	37212727	37212808	protein_coding	Pdcl	exon	ENSMUSG00000009030	ProperStrand	32	chr9	64024466	64024502	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	5	-19.1866
chr2	117996397	117996487	LTR	MTD	MaLR	chr2MTD117996187	ProperStrand	8	chr10	110918549	110918629	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-7.4365
chr13	8766291	8766308	protein_coding	Adarb2	utr3	ENSMUSG00000052551	ProperStrand	292	chr9	40612865	40612921	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	3	-14.5645
chr8	112350548	112350564	protein_coding	Ap1g1	exon	ENSMUSG00000031731	NonProperStrand	2	chr19	8963090	8963180	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-9.4105
chr3	95733358	95733442	protein_coding	Anp32e	utr5	ENSMUSG00000015749	ProperStrand	25	chr18	35716734	35716824	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.7263
chr11	54723160	54723224	protein_coding	Gpx3	utr3	ENSMUSG00000018339	ProperStrand	7	chr14	27294982	27295008	protein_coding	Slmap	intron	ENSMUSG00000021870	ProperStrand	9	1	-19.9681
chr7	137873268	137875045	protein_coding	Tacc2	exon	ENSMUSG00000030852	ProperStrand	95	chr10	110918592	110918682	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-2.6284
chr9	95525004	95525035	antisense	Gm16126	.	ENSMUSG00000086585	NonProperStrand	229	chr18	35716697	35716762	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-0.9682
chr5	77427220	77427247	protein_coding	Srp72	exon	ENSMUSG00000036323	ProperStrand	41	chr6	45965480	46120177	protein_coding	Cntnap2	exon	ENSMUSG00000039419	NonProperStrand	283	1	-10.9719
chr12	89699698	89699714	protein_coding	Adck1	utr3	ENSMUSG00000021044	NonProperStrand	42	chr9	120039581	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-6.7075
chr1	13146579	13150282	protein_coding	Ncoa2	exon	ENSMUSG00000005886	ProperStrand	26	chr2	26494710	26494800	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.6773
chr18	36961550	36961640	misc_RNA	Vault	.	ENSMUSG00000065145	ProperStrand	177	chr5	108333867	108333910	protein_coding	Rpl5	exon	ENSMUSG00000058558	ProperStrand	235	6	-19.6504
chr8	13416895	13416911	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr4	148608847	148608864	protein_coding	Kif1b	utr3	ENSMUSG00000063077	NonProperStrand	19	1	-8.7651
chr15	31522405	31522495	protein_coding	Cct5	exon	ENSMUSG00000022234	ProperStrand	116	chr16	23111692	23111772	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-0.9658
chr1	51871949	51872068	protein_coding	Myo1b	intron	ENSMUSG00000018417	ProperStrand	31	chr15	79908931	79908957	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-6.7787
chr19	45075667	45075757	protein_coding	Sema4g	exon	ENSMUSG00000025207	ProperStrand	58	chr16	23111695	23111775	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.9572
chr6	113383189	113383207	protein_coding	Cidec	exon	ENSMUSG00000030278	NonProperStrand	9	chr11	6428077	6428154	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-16.1145
chr8	72809415	72809835	protein_coding	Homer3	exon	ENSMUSG00000003573	ProperStrand	45	chr17	24857794	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	4	-9.8741
chr2	27391094	27391194	protein_coding	Wdr5	utr3	ENSMUSG00000026917	ProperStrand	81	chr16	91270623	91270640	protein_coding	Olig1	exon	ENSMUSG00000046160	NonProperStrand	32	11	-19.1613
chr4	139295481	139295497	protein_coding	Pax7	utr3	ENSMUSG00000028736	ProperStrand	23	chr16	23111447	23111494	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.7951
chr1	129820987	129821003	protein_coding	Rab3gap1	intron	ENSMUSG00000036104	NonProperStrand	20	chr11	97372833	97372849	protein_coding	Srcin1	utr3	ENSMUSG00000038453	NonProperStrand	21	1	-17.4428
chr19	23332023	23332040	protein_coding	Smc5	exon	ENSMUSG00000024943	ProperStrand	146	chr7	117189992	117190015	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-1.8152
chr3	158423925	158424015	LTR	RLTR42-int	ERVK	chr3RLTR42-int158423640	NonProperStrand	1	chr3	158424191	158424271	LTR	RLTR42-int	ERVK	chr3RLTR42-int158424191	NonProperStrand	1	1	-inf
chr10	121307271	121307293	protein_coding	Srgap1	intron	ENSMUSG00000020121	ProperStrand	33	chr18	24939489	24939515	protein_coding	Fhod3	intron	ENSMUSG00000034295	ProperStrand	23	1	-16.3950
chr7	152085648	152085689	protein_coding	Fgf15	exon	ENSMUSG00000031073	ProperStrand	5	chr4	131908356	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-6.0411
chr2	32563527	32563545	protein_coding	Cdk9	exon	ENSMUSG00000009555	NonProperStrand	49	chr5	34894211	34894227	protein_coding	Sh3bp2	utr5	ENSMUSG00000054520	ProperStrand	43	1	-14.4016
chr9	63042015	63042031	protein_coding	Map2k5	exon	ENSMUSG00000058444	ProperStrand	193	chr2	144087414	144087463	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-4.2777
chr1	191557170	191557194	protein_coding	Ptpn14	intron	ENSMUSG00000026604	ProperStrand	74	chr3	123210900	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.7343
chr5	31594916	31594932	protein_coding	Fndc4	utr3	ENSMUSG00000038552	NonProperStrand	3	chr7	117189863	117189884	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	2	-19.8343
chr9	103248160	103249040	protein_coding	Topbp1	exon	ENSMUSG00000032555	ProperStrand	81	chr5	74489650	74489671	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-3.2265
chr2	167433416	167433464	protein_coding	Gm20431	utr3	ENSMUSG00000089739	ProperStrand	81	chr4	131866160	131866250	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-5.3643
chr18	35381730	35383097	protein_coding	Ctnna1	exon	ENSMUSG00000037815	ProperStrand	115	chr1	162966812	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	10	-inf
chr17	46861595	46861611	protein_coding	Pex6	exon	ENSMUSG00000002763	ProperStrand	292	chr7	52381737	52381759	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-4.4794
chr4	131908643	131908674	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr4	116875200	116875250	snRNA	ENSMUSG00000070228_U5	.	ENSMUSG00000070228	ProperStrand	131	3	-13.2163
chr15	76721949	76722049	protein_coding	Zfp7	exon	ENSMUSG00000033669	ProperStrand	15	chr1	162967511	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-6.1639
chr11	5423623	5423662	protein_coding-noncoding	Xbp1	utr5	ENSMUSG00000020484	ProperStrand	1	chr5	108336392	108336492	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-inf
chr2	32563527	32563544	protein_coding	Cdk9	exon	ENSMUSG00000009555	NonProperStrand	49	chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	1	-9.8524
chr14	60179615	60179631	SINE	RSINE1	B4	chr14RSINE160179597	NonProperStrand	1	chr3	153574591	153574654	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	1	-inf
chr17	46861595	46861611	protein_coding	Pex6	exon	ENSMUSG00000002763	ProperStrand	292	chr19	44369429	44369448	protein_coding	Scd2	exon	ENSMUSG00000025203	ProperStrand	219	1	-7.5559
chr11	93954942	93958562	protein_coding	Spag9	exon	ENSMUSG00000020859	ProperStrand	23	chr14	33005138	33005213	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	3	-13.6390
chr14	72301755	72301771	SINE	B4	B4	chr14B472301692	NonProperStrand	99	chr9	14621333	14621398	protein_coding	Mre11a	exon	ENSMUSG00000031928	ProperStrand	20	1	-14.5377
chr7	52958453	52958469	protein_coding	Car11	exon	ENSMUSG00000003273	NonProperStrand	250	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-3.8362
chr4	107877264	107877321	protein_coding	Zyg11a	exon	ENSMUSG00000034645	ProperStrand	19	chr18	35714159	35714259	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-5.6546
chr19	4909946	4913798	protein_coding	Dpp3	exon	ENSMUSG00000063904	ProperStrand	36	chr11	69483181	69483271	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.3562
chr7	118214192	118214208	protein_coding	Eif4g2	utr3	ENSMUSG00000005610	NonProperStrand	30	chr8	73419684	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.4253
chr8	73419553	73419872	protein_coding	Rpl18a	exon	ENSMUSG00000045128	ProperStrand	394	chr5	130300475	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	6	-3.2638
chr7	52098389	52098405	protein_coding	Tbc1d17	exon	ENSMUSG00000038520	NonProperStrand	1	chr7	29136525	29136578	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-inf
chr2	170520528	170520545	Other	RMER1B	Other	chr2RMER1B170520441	ProperStrand	12	chr11	62416599	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-8.3961
chr4	137124478	137124724	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	chr5	36226512	36226528	protein_coding	Ablim2	utr3	ENSMUSG00000029095	ProperStrand	36	1	-9.1308
chr3	96218434	96218524	misc_RNA	Telomerase-vert	.	ENSMUSG00000064796	ProperStrand	443	chrX	103397808	103397866	protein_coding	Pgk1	exon	ENSMUSG00000062070	ProperStrand	484	1	-5.1835
chr4	148494710	148494727	protein_coding	Dffa	utr3	ENSMUSG00000028974	NonProperStrand	23	chr2	26768049	26768107	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	1	-10.3299
chr14	63287576	63287615	protein_coding	Serpine3	intron	ENSMUSG00000091155	ProperStrand	210	chr11	69481335	69481432	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	14	-inf
chr8	48968936	48972478	protein_coding	Wwc2	exon	ENSMUSG00000031563	ProperStrand	37	chr2	135820134	135824417	protein_coding	Plcb4	exon	ENSMUSG00000039943	NonProperStrand	57	3	-19.8985
chr2	26494708	26494842	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	chr17	35089181	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	24	-3.1042
chr10	53257743	53257772	protein_coding	Mcm9	exon	ENSMUSG00000058298	ProperStrand	24	chr17	35299507	35299595	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	2	-10.6759
chr3	32242562	32244405	protein_coding	Zmat3	exon	ENSMUSG00000027663	ProperStrand	62	chr6	91706079	91706126	protein_coding	Slc6a6	utr3	ENSMUSG00000030096	ProperStrand	206	3	-inf
chr14	62662009	62662026	LINE	L1MB7	L1	chr14L1MB762661582	NonProperStrand	1	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-inf
chr4	135420566	135420595	protein_coding	Srsf10	utr3	ENSMUSG00000028676	ProperStrand	31	chr19	8963032	8963048	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-11.4894
chr10	39978350	39978474	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	chr1	162966813	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	13	-11.5504
mmu-miR-2137	0	19	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	chr4	133742939	133742956	protein_coding	Ccdc21	utr5	ENSMUSG00000037443	ProperStrand	112	1	-10.3027
chr19	10057286	10057367	protein_coding	Fth1	utr5	ENSMUSG00000024661	ProperStrand	75	chr1	88247743	88247776	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	3	-11.1025
chr9	105579203	105580504	protein_coding	Pik3r4	exon	ENSMUSG00000032571	ProperStrand	49	chr17	35384166	35384195	snoRNA	ENSMUSG00000065273_SNORD83	.	ENSMUSG00000065273	ProperStrand	244	7	-inf
chr6	122269363	122269380	protein_coding	Phc1	exon	ENSMUSG00000040669	ProperStrand	158	chr11	6428103	6428155	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.5772
chr5	138608439	138608456	protein_coding	Mcm7	exon	ENSMUSG00000029730	NonProperStrand	10	chr9	120039533	120039618	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	3	-15.9040
chr11	119796295	119796312	LINE	L1M3	L1	chr11L1M3119796212	ProperStrand	14	chr7	29136553	29136575	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.0758
chr8	82223274	82223298	protein_coding	Abce1	exon	ENSMUSG00000058355	ProperStrand	66	chr11	51551338	51551412	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	2	-12.0316
chr14	106291518	106292374	protein_coding	Spry2	exon	ENSMUSG00000022114	ProperStrand	22	chr10	23505178	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-4.9863
chr7	133906919	133906970	protein_coding	Mapk3	exon	ENSMUSG00000063065	ProperStrand	9	chr16	13677843	13677859	protein_coding	3110001I22Rik	exon	ENSMUSG00000079737	NonProperStrand	2	1	-inf
chr9	15130933	15131005	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	chr17	35087895	35087916	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-1.5637
chr16	10413825	10419754	protein_coding	Nubp1	exon	ENSMUSG00000022503	ProperStrand	5	chr3	123210882	123210979	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-11.4476
chr14	37942502	37942536	protein_coding	Ghitm	intron	ENSMUSG00000041028	ProperStrand	26	chr10	80641692	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	1	-9.2307
chr4	44025810	44031694	protein_coding	Clta	exon	ENSMUSG00000028478	ProperStrand	59	chr13	96100719	96100809	protein_coding	Zbed3	intron	ENSMUSG00000041995	ProperStrand	33	1	-14.5439
chr18	60936721	60937467	protein_coding	Rps14	exon	ENSMUSG00000024608	ProperStrand	154	chr4	131865428	131865518	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-2.3154
chr4	135566975	135566998	protein_coding	Tceb3	exon	ENSMUSG00000028668	ProperStrand	17	chr6	115542305	115542322	protein_coding	2510049J12Rik	exon	ENSMUSG00000068011	NonProperStrand	4	1	-inf
chr8	87223593	87223609	protein_coding	Trmt1	exon	ENSMUSG00000001909	NonProperStrand	60	chr4	131908809	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-2.3640
chr13	58229661	58229720	protein_coding	Hnrnpa0	utr5	ENSMUSG00000007836	ProperStrand	110	chr3	33713610	33713626	protein_coding	Ccdc39	exon	ENSMUSG00000027676	ProperStrand	106	1	-10.9527
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr8	72459756	72459827	protein_coding	Gatad2a	exon	ENSMUSG00000036180	ProperStrand	112	1	-5.7961
chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	chr2	32089329	32089379	protein_coding	Prrc2b	utr3	ENSMUSG00000039262	ProperStrand	344	1	-5.3768
chr9	77503397	77503414	protein_coding	Klhl31	exon	ENSMUSG00000044938	NonProperStrand	2	chr17	35087895	35087942	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-12.6096
chr17	59184906	59184984	LINE	L1Md_A	L1	chr17L1Md_A59184296	ProperStrand	1	chr5	108334230	108334330	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-inf
chr9	120868819	120868927	protein_coding	Ctnnb1	utr3	ENSMUSG00000006932	ProperStrand	214	chr10	80641721	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	1	-5.0490
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr3	68889026	68889054	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-0.9828
chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	chr7	134336866	134336913	protein_coding	Cd2bp2	utr3	ENSMUSG00000042502	ProperStrand	73	1	-8.8767
chr18	76297633	76297649	protein_coding	Zbtb7c	exon	ENSMUSG00000044646	ProperStrand	64	chr1	182743653	182743687	protein_coding	H3f3a	utr5	ENSMUSG00000060743	ProperStrand	46	1	-13.7184
chr11	120619253	120619333	LTR	RLTR18	ERVK	chr11RLTR18120619130	ProperStrand	1	chr11	120619491	120619581	SINE	B3	B2	chr11B3120619461	ProperStrand	1	1	-inf
chr7	118226460	118226499	protein_coding	Eif4g2	utr5	ENSMUSG00000005610	ProperStrand	134	chr13	49779745	49779802	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	2	-8.8891
chr1	71644053	71644143	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr1	39605592	39605672	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-2.1899
chr17	81344133	81344150	protein_coding	Tmem178	exon	ENSMUSG00000024245	ProperStrand	67	chr11	120824841	120824940	protein_coding	Csnk1d	utr3	ENSMUSG00000025162	ProperStrand	37	1	-14.0613
chr5	3692184	3692200	protein_coding	Ankib1	utr3	ENSMUSG00000040351	NonProperStrand	98	chr19	8963026	8963126	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.5030
chr19	38470512	38470530	protein_coding	Tmem20	utr5	ENSMUSG00000044026	NonProperStrand	23	chr10	23505152	23505217	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.7622
chr11	3426352	3426368	protein_coding	Smtn	exon	ENSMUSG00000020439	ProperStrand	222	chr4	131825994	131826121	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	1	-6.6143
chr12	85350481	85350499	protein_coding	Acot1	utr5	ENSMUSG00000072949	ProperStrand	72	chr4	131908689	131908739	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.9862
chr2	26493422	26493518	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr7	52773316	52773334	protein_coding	Tulp2	exon	ENSMUSG00000023467	ProperStrand	24	4	-21.1367
chr2	26768049	26768108	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	chr8	73419657	73419770	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	9	-5.0432
chr16	26140778	26140868	LTR	MTC-int	MaLR	chr16MTC-int26140356	ProperStrand	1	chr16	26141155	26141245	LTR	ORR1C2	MaLR	chr16ORR1C226141029	ProperStrand	1	1	-inf
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr2	32818804	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	9	-15.9551
chr15	4962082	4962098	protein_coding	C7	utr3	ENSMUSG00000079105	ProperStrand	63	chr1	162968442	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-5.9830
chr7	3657460	3657513	protein_coding	Rps9	exon	ENSMUSG00000006333	ProperStrand	87	chr16	17914644	17914661	protein_coding	Gsc2	exon	ENSMUSG00000022738	ProperStrand	2	1	-20.1717
chr2	152240542	152240558	protein_coding	Zcchc3	utr5	ENSMUSG00000074682	NonProperStrand	4	chr1	9932549	9932607	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-13.3965
chr19	8799409	8799433	snoRNA	ENSMUSG00000065280_SNORD28	.	ENSMUSG00000065280	ProperStrand	269	chr5	108334195	108334273	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	2	-3.7765
chr17	45653544	45653805	protein_coding	Aars2	exon	ENSMUSG00000023938	ProperStrand	14	chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	1	-12.7946
chr7	87225975	87226044	protein_coding	Zfp710	exon	ENSMUSG00000048897	ProperStrand	229	chr10	110918594	110918684	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	4	-5.3934
chr6	122269451	122269537	protein_coding	Phc1	exon	ENSMUSG00000040669	ProperStrand	158	chr7	28359644	28359667	protein_coding	2310022A10Rik	exon	ENSMUSG00000049643	ProperStrand	10	1	-15.0302
chr9	15130915	15131005	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	chr10	90581059	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-1.2724
chr8	73033222	73033452	protein_coding	2810422J05Rik	exon	ENSMUSG00000055553	ProperStrand	171	chr1	155287312	155287354	snoRNA	ENSMUSG00000064435_SNORA4	.	ENSMUSG00000064435	ProperStrand	263	1	-8.2552
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr9	72816966	72816982	protein_coding	Dyx1c1	exon	ENSMUSG00000092192	ProperStrand	34	1	-8.8799
chr8	28200441	28200458	protein_coding	Gpr124	intron	ENSMUSG00000031486	ProperStrand	21	chr4	131865855	131865926	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-6.1443
chr1	155287313	155287355	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	chr1	162965531	162965593	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-0.6976
chr15	75833791	75833882	protein_coding	Fam83h	exon	ENSMUSG00000046761	ProperStrand	10	chr8	87533466	87533566	protein_coding	Best2	exon	ENSMUSG00000052819	ProperStrand	9	3	-20.5112
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr4	131908235	131908453	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	13	-2.9898
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr18	35714194	35714292	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-0.7715
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr13	76341035	76341055	protein_coding	Fam81b	intron	ENSMUSG00000078966	NonProperStrand	220	1	-10.5468
chr16	23110825	23110851	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	1	-5.1520
chr3	142351261	142351279	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr1	129228399	129228489	snoRNA	ENSMUSG00000093146_AC131793.1	.	ENSMUSG00000093146	ProperStrand	119	1	-6.4363
chr11	115359514	115359591	protein_coding	Hn1	exon	ENSMUSG00000020737	ProperStrand	18	chr9	65049532	65049632	snRNA	ENSMUSG00000075930_U5	.	ENSMUSG00000075930	ProperStrand	175	1	-13.6047
chr7	34999538	34999599	protein_coding	Gpi1	intron	ENSMUSG00000036427	ProperStrand	288	chr9	120039650	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-0.8681
chr11	106643340	106643430	protein_coding	Ddx5	exon	ENSMUSG00000020719	ProperStrand	181	chr9	15118297	15118377	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-2.9677
chr18	6026445	6026499	protein_coding	Arhgap12	utr3	ENSMUSG00000041225	ProperStrand	25	chr16	23111374	23111464	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.6475
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr3	108228259	108228275	protein_coding	Sars	utr3	ENSMUSG00000068739	NonProperStrand	200	1	-6.2035
chr10	9920803	9920826	LINE	Lx6	L1	chr10Lx69920385	ProperStrand	1	chr11	6375964	6375981	antisense	Gm11973	.	ENSMUSG00000086839	NonProperStrand	6	1	-inf
chr12	88488443	88496424	protein_coding	Pomt2	exon	ENSMUSG00000034126	NonProperStrand	331	chr5	151755616	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	4	-13.9451
chr1	133724844	133724861	protein_coding	Slc41a1	utr5	ENSMUSG00000013275	ProperStrand	19	chr15	79908958	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-7.7665
chr4	55431651	55431668	lincRNA	Gm12505	exon	ENSMUSG00000087070	ProperStrand	447	chr6	115757999	115758069	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-1.8369
chr18	37456851	37456868	protein_coding	Pcdhb2	exon	ENSMUSG00000051599	ProperStrand	7	chr2	63936035	63936053	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	2	-19.4130
chr11	102294589	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr6	71832605	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	3	-4.6775
chr7	119785308	119785329	lincRNA	2310014F06Rik	intron	ENSMUSG00000085945	NonProperStrand	25	chr19	8798740	8798768	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-6.5239
chr4	132753555	132753601	protein_coding	Wasf2	utr3	ENSMUSG00000028868	ProperStrand	56	chr15	76541224	76541240	protein_coding	Lrrc14	utr5	ENSMUSG00000033728	ProperStrand	52	1	-13.7404
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr17	36097663	36097764	protein_coding	Abcf1	exon	ENSMUSG00000038762	ProperStrand	206	2	-8.7808
chr4	107596083	107596100	protein_coding	Cpt2	utr5	ENSMUSG00000028607	NonProperStrand	106	chr11	106362304	106362380	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-4.7368
mmu-miR-6240	2	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr11	11867679	11870432	protein_coding	Grb10	exon	ENSMUSG00000020176	NonProperStrand	159	1	-4.0270
chr1	59268326	59272039	protein_coding	Als2	exon	ENSMUSG00000026024	ProperStrand	32	chrX	34622906	34622948	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-4.3443
chr9	107851361	107851397	protein_coding	Camkv	utr3	ENSMUSG00000032936	ProperStrand	14	chr4	131866162	131866252	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	7	-inf
chr5	115169677	115169694	protein_coding	Tchp	exon	ENSMUSG00000002486	ProperStrand	19	chr2	145077958	145209255	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-10.0467
chr2	90235285	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr18	16933117	16966848	protein_coding	Cdh2	exon	ENSMUSG00000024304	ProperStrand	71	2	-6.9404
chr9	83678799	83681879	protein_coding	Elovl4	exon	ENSMUSG00000032262	ProperStrand	159	chr9	61265020	61265059	protein_coding	Tle3	utr3	ENSMUSG00000032280	ProperStrand	88	1	-10.5878
mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr18	63908609	63908625	protein_coding	Wdr7	intron	ENSMUSG00000040560	NonProperStrand	180	1	-3.7956
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	193925421	193925437	protein_coding	Rcor3	intron	ENSMUSG00000037395	ProperStrand	25	3	-14.2791
chr13	45010193	45010233	protein_coding	Jarid2	exon	ENSMUSG00000038518	ProperStrand	372	chr19	8798743	8798810	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-1.5867
chr2	26494784	26494874	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr10	75719833	75719849	protein_coding	S100b	exon	ENSMUSG00000033208	ProperStrand	20	1	-8.3972
chr17	39979964	39980024	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr12	37542837	37542860	miRNA	Mir5099	.	ENSMUSG00000092998	ProperStrand	13	2	-16.3626
chr4	126697717	126697771	SINE	B1_Mm	Alu	chr4B1_Mm126697689	ProperStrand	5	chr4	131908689	131908797	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-inf
chr7	151765212	151765228	antisense	Gm10574	.	ENSMUSG00000073778	ProperStrand	357	chr12	88607781	88607853	protein_coding	Ahsa1	utr5	ENSMUSG00000021037	ProperStrand	58	1	-9.8087
chr10	89282305	89282322	protein_coding	Uhrf1bp1l	utr3	ENSMUSG00000019951	NonProperStrand	55	chr1	162286088	162286104	protein_coding	Rabgap1l	intron	ENSMUSG00000026721	ProperStrand	44	1	-14.1120
chr4	122970435	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	chr8	13876097	13876177	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-1.6957
chr2	90235303	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	82600670	82600686	protein_coding	Akap13	intron	ENSMUSG00000066406	ProperStrand	80	1	-3.9184
chr4	106434699	106435060	protein_coding	Acot11	exon	ENSMUSG00000034853	ProperStrand	61	chr10	104638814	104638830	protein_coding	Tmtc2	intron	ENSMUSG00000036019	NonProperStrand	14	1	-16.2608
chr2	36098338	36098438	protein_coding	Ptgs1	exon	ENSMUSG00000047250	ProperStrand	1	chr4	131908809	131908869	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-inf
chr5	22051582	22051600	protein_coding	Orc5	intron	ENSMUSG00000029012	ProperStrand	4	chr11	54330886	54330986	protein_coding	Fnip1	utr3	ENSMUSG00000035992	ProperStrand	16	2	-inf
chr14	51571952	51571978	protein_coding	Pnp	utr3	ENSMUSG00000021871	NonProperStrand	4	chr3	123210892	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-18.3087
chr2	90235313	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	181027187	181027205	protein_coding	Smyd3	intron	ENSMUSG00000055067	ProperStrand	231	1	-2.0506
chr2	29001741	29035080	protein_coding	Setx	exon	ENSMUSG00000043535	ProperStrand	187	chr4	131908255	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-1.0878
chr17	29042963	29042980	antisense	1700030A11Rik	.	ENSMUSG00000085333	ProperStrand	17	chr10	23505193	23505234	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.3129
chr8	127161409	127161482	protein_coding	2310022B05Rik	utr3	ENSMUSG00000031983	ProperStrand	10	chr4	131865855	131865946	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.0395
chr10	126993151	126993300	protein_coding	Lrp1	exon	ENSMUSG00000040249	ProperStrand	151	chr7	117189959	117190016	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-1.7631
chr13	13581353	13582342	protein_coding	Nid1	exon	ENSMUSG00000005397	ProperStrand	112	chr6	92193062	92193679	protein_coding	Trh	exon	ENSMUSG00000005892	ProperStrand	87	1	-11.3130
chr15	60661083	60661099	lincRNA	9930014A18Rik	exon	ENSMUSG00000044513	ProperStrand	54	chr12	88488443	88496424	protein_coding	Pomt2	exon	ENSMUSG00000034126	NonProperStrand	331	1	-10.1033
chr4	88369960	88369977	SINE	B3	B2	chr4B388369920	NonProperStrand	22	chr2	180646451	180646522	protein_coding	Ythdf1	exon	ENSMUSG00000038848	ProperStrand	59	1	-15.3724
chr11	53678881	53678898	protein_coding	Slc22a5	utr3	ENSMUSG00000018900	ProperStrand	9	chr17	24856620	24856720	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-10.2892
chr1	133252344	133252362	protein_coding	Srgap2	intron	ENSMUSG00000026425	ProperStrand	299	chr13	54781427	54781495	protein_coding	Rnf44	utr3	ENSMUSG00000034928	ProperStrand	90	2	-14.6875
chr8	72287172	72287188	protein_coding	Zfp866	utr3	ENSMUSG00000043090	NonProperStrand	134	chr18	35714173	35714291	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	6	-12.5196
chr6	96426014	96426031	protein_coding	Fam19a1	intron	ENSMUSG00000059187	NonProperStrand	60	chr4	131908689	131908790	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.2237
chrX	133268670	133268770	protein_coding	Morf4l2	exon	ENSMUSG00000031422	ProperStrand	113	chr4	116826699	116826761	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-5.5360
chr15	82001618	82001634	protein_coding	Srebf2	exon	ENSMUSG00000022463	ProperStrand	592	chr16	38158134	38158226	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	1	-4.1678
chr16	23109056	23109090	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	chr1	9932556	9932625	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-2.0539
chr4	117317872	117317929	protein_coding	Eri3	intron	ENSMUSG00000033423	ProperStrand	246	chr2	26768368	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	3	-7.5146
chr2	90235295	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	150735319	150735339	protein_coding	Gins1	utr5	ENSMUSG00000027454	ProperStrand	51	1	-4.7748
chrX	148277560	148277697	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	chr3	14654682	14654698	protein_coding	Car13	intron	ENSMUSG00000027555	ProperStrand	4	1	-14.7478
chrX	70237450	70237471	miRNA	Mir2137	.	ENSMUSG00000089357	ProperStrand	50	chr5	111121066	111121186	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-6.7960
chr18	60974743	60974764	protein_coding	Tcof1	intron	ENSMUSG00000024613	ProperStrand	68	chr19	8963031	8963085	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-3.7295
chr3	137849424	137849440	protein_coding	4930579F01Rik	utr5	ENSMUSG00000012042	NonProperStrand	156	chr17	56541949	56541999	protein_coding	Kdm4b	utr3	ENSMUSG00000024201	ProperStrand	45	1	-11.9761
chr13	86184601	86184652	snoRNA	ENSMUSG00000064917_snoZ39	.	ENSMUSG00000064917	ProperStrand	15	chr14	33005080	33005190	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	5	-20.1215
chr18	67807799	67807868	protein_coding	Psmg2	exon	ENSMUSG00000024537	ProperStrand	13	chr5	74489642	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-6.7799
chr19	3591763	3615746	protein_coding	Lrp5	exon	ENSMUSG00000024913	ProperStrand	145	chr10	80641498	80644722	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	2	-7.3051
chr12	17552948	17553089	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr2	158182156	158182292	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	12	-3.0373
chr16	22060831	22060921	protein_coding	Igf2bp2	utr3	ENSMUSG00000033581	ProperStrand	23	chr2	26493405	26493485	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-5.5917
chr3	138191589	138191626	protein_coding	Eif4e	intron	ENSMUSG00000028156	ProperStrand	25	chr16	23111451	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.6475
chr6	125060381	125063492	protein_coding	Chd4	exon	ENSMUSG00000063870	ProperStrand	303	chr12	81618888	81618907	snoRNA	ENSMUSG00000093141_AC163282.1	.	ENSMUSG00000093141	ProperStrand	39	1	-10.9363
chr6	85580111	85580128	protein_coding	Alms1	intron	ENSMUSG00000063810	ProperStrand	37	chr7	116663633	116663708	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.3721
chr10	77455240	77455257	protein_coding	Pfkl	exon	ENSMUSG00000020277	ProperStrand	179	chr6	124791245	124791261	protein_coding	Leprel2	utr3	ENSMUSG00000023191	ProperStrand	44	1	-11.7460
chr3	88684243	88684322	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr4	116862584	116862662	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	5	-13.0140
chr3	103718462	103766721	protein_coding	Rsbn1	utr3	ENSMUSG00000044098	NonProperStrand	17	chr4	131908260	131908451	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-12.2081
chr13	19777337	19777359	protein_coding	Txndc3	intron	ENSMUSG00000041138	NonProperStrand	5	chr15	34370551	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	4	-19.6661
chr15	101926828	101927185	protein_coding	Eif4b	utr3	ENSMUSG00000058655	ProperStrand	484	chr8	32260343	32260430	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	3	-3.4166
chr2	90235299	90235345	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	90355433	90356025	protein_coding	Ccdc37	exon	ENSMUSG00000048794	ProperStrand	6	1	-9.1372
chr2	90235293	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	151730301	151730737	protein_coding	Chd5	exon	ENSMUSG00000005045	NonProperStrand	147	1	-2.8129
chr17	56262827	56262844	protein_coding	Sema6b	utr3	ENSMUSG00000001227	NonProperStrand	1	chr16	23111779	23111803	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-inf
chr1	183768564	183768653	protein_coding	Lbr	exon	ENSMUSG00000004880	ProperStrand	97	chr3	88497853	88497933	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-6.5070
chr7	82895831	82895849	protein_coding	Akap13	utr3	ENSMUSG00000066406	ProperStrand	80	chr9	120038579	120038669	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.5344
chr11	67005924	67005940	protein_coding	Myh2	exon	ENSMUSG00000033196	ProperStrand	66	chr6	115758011	115758132	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-5.2861
chr11	35792299	35792399	protein_coding	Wwc1	intron	ENSMUSG00000018849	ProperStrand	52	chr18	35716763	35716788	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.4091
chr9	86732932	86732948	protein_coding	Snap91	exon	ENSMUSG00000033419	ProperStrand	17	chr10	23505240	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.3129
chr13	72765623	72765640	antisense	Gm20554	.	ENSMUSG00000093587	NonProperStrand	40	chr7	29136525	29136575	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.0737
chr1	63225611	63225701	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	chr17	13115655	13115724	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	1	-1.4283
chr14	15572351	15572370	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	1	-6.8257
chr12	88488443	88496424	protein_coding	Pomt2	exon	ENSMUSG00000034126	NonProperStrand	331	chr14	68545942	68545958	protein_coding	Dock5	intron	ENSMUSG00000044447	ProperStrand	12	1	-13.1745
chr16	33960341	33961675	protein_coding	Umps	exon	ENSMUSG00000022814	ProperStrand	20	chr16	23110874	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-6.8326
chr7	35025568	35025658	protein_coding	4931406P16Rik	exon	ENSMUSG00000066571	ProperStrand	75	chr1	88247790	88247870	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	39	-inf
chr4	115484059	115484086	protein_coding	Atpaf1	utr3	ENSMUSG00000028710	ProperStrand	202	chr7	116663707	116663754	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-0.7508
chr5	30446030	30446088	protein_coding	Hadha	utr3	ENSMUSG00000025745	ProperStrand	35	chr16	23110963	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-4.3005
chr8	87200991	87201081	protein_coding	Nacc1	exon	ENSMUSG00000001910	ProperStrand	130	chr1	93263065	93263082	protein_coding	Fam132b	exon	ENSMUSG00000047443	NonProperStrand	98	1	-10.7750
chr8	33124021	33124037	lincRNA	Gm17443	intron	ENSMUSG00000091819	ProperStrand	9	chr12	31569601	31569618	protein_coding	Fam150b	utr5	ENSMUSG00000054204	ProperStrand	12	1	-20.0762
chr2	130101276	130103303	protein_coding	Nop56	exon	ENSMUSG00000027405	ProperStrand	125	chr2	158182157	158182291	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	2	-6.1205
chr14	99461551	99461598	protein_coding	6720463M24Rik	exon	ENSMUSG00000022070	ProperStrand	23	chr17	39985664	39985763	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-7.8467
chr5	92485085	92485218	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	chr3	123210854	123210953	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	8	-1.8450
chr19	10792761	10792778	protein_coding	Cd5	utr3	ENSMUSG00000024669	NonProperStrand	2	chr11	6428123	6428154	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-10.4671
chr1	183853750	183853767	protein_coding	Enah	exon	ENSMUSG00000022995	NonProperStrand	33	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-10.1839
chr3	96218465	96218488	misc_RNA	Telomerase-vert	.	ENSMUSG00000064796	NonProperStrand	6	chr4	126117870	126117887	protein_coding	Eif2c1	intron	ENSMUSG00000041530	ProperStrand	30	1	-18.9879
chr17	27699502	27699592	protein_coding	Hmga1	utr3	ENSMUSG00000046711	ProperStrand	180	chr6	115758047	115758127	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-3.3886
chr5	135635277	135635294	protein_coding	Tbl2	exon	ENSMUSG00000005374	NonProperStrand	4	chr4	131908815	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-6.2660
chr4	86500718	86503230	protein_coding	Rps6	exon	ENSMUSG00000028495	ProperStrand	263	chr3	123210853	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-1.2520
chr12	110925010	110925048	snoRNA	ENSMUSG00000064726_SNORD113	.	ENSMUSG00000064726	ProperStrand	42	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.3954
chr7	109059864	109059954	protein_coding	2400001E08Rik	utr3	ENSMUSG00000030842	ProperStrand	18	chr7	117190020	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-5.6444
chr1	191058375	191058394	protein_coding	Kcnk2	intron	ENSMUSG00000037624	ProperStrand	56	chr11	6428060	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.3176
chr2	79843543	79843559	protein_coding	Pde1a	intron	ENSMUSG00000059173	NonProperStrand	275	chr11	62416950	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-3.1521
chr4	124796957	124796973	protein_coding	Zc3h12a	exon	ENSMUSG00000042677	ProperStrand	37	chr11	62418041	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-6.5114
chr16	98172060	98172078	protein_coding	Zfp295	exon	ENSMUSG00000046962	NonProperStrand	1	chr7	117189933	117189981	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-inf
chr14	35560521	35560555	protein_coding	Wapal	utr3	ENSMUSG00000041408	ProperStrand	93	chr8	73419696	73419786	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.3652
chr12	71297960	71297977	protein_coding	Pygl	exon	ENSMUSG00000021069	ProperStrand	4	chr7	52381973	52382041	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	2	-21.8976
chrX	147899869	147899886	protein_coding	Fam120c	exon	ENSMUSG00000025262	ProperStrand	6	chr10	90581244	90581282	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-9.4975
chr6	125058368	125058389	protein_coding	Chd4	exon	ENSMUSG00000063870	ProperStrand	303	chr18	73693109	73693135	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-2.5165
chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	chr5	31190509	31190546	tRNA	tRNA109-TyrGTA	.	21767	ProperStrand	64	1	-10.4889
chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	chr7	25413996	25414012	protein_coding	Phldb3	utr3	ENSMUSG00000074277	NonProperStrand	2	1	-15.6549
chr9	20918701	20918717	protein_coding	Tyk2	exon	ENSMUSG00000032175	ProperStrand	29	chr7	13516170	13516207	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	1	-10.1324
chr1	94962409	94962425	protein_coding	Kif1a	intron	ENSMUSG00000014602	ProperStrand	18	chr1	162965531	162965552	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.5840
chr11	102218543	102218559	protein_coding	Slc4a1	exon	ENSMUSG00000006574	NonProperStrand	2	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-8.7800
chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	chr6	71832627	71832685	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-1.9354
chr7	63407897	63407928	protein_coding	Herc2	exon	ENSMUSG00000030451	ProperStrand	66	chr4	131866171	131866292	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-5.9416
chr4	53015201	53015217	SINE	B1F1	Alu	chr4B1F153015138	ProperStrand	102	chr9	65044377	65044456	snRNA	ENSMUSG00000075763_U5	.	ENSMUSG00000075763	ProperStrand	216	1	-9.6793
chr11	69482604	69482650	protein_coding	Eif4a1	exon	ENSMUSG00000059796	ProperStrand	108	chr7	67123735	67123759	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	1	-8.3621
chr11	98878340	98878371	protein_coding-noncoding	Top2a	utr3	ENSMUSG00000020914	ProperStrand	18	chr4	131866156	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-5.9995
chr1	89673610	89673714	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	chr13	21292094	21292113	tRNA	tRNA65-LeuCAA	.	444563	ProperStrand	57	1	-3.3568
chr10	128006537	128006582	protein_coding	Erbb3	exon	ENSMUSG00000018166	ProperStrand	49	chr12	70970609	70970625	protein_coding	Map4k5	intron	ENSMUSG00000034761	NonProperStrand	5	1	-18.9422
chr7	51503508	51503548	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	chr9	120039580	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	5	-2.3396
chr11	42440243	42440259	protein_coding	Gabrb2	exon	ENSMUSG00000007653	ProperStrand	248	chr1	132742959	132742975	protein_coding	Pigr	exon	ENSMUSG00000026417	NonProperStrand	48	1	-10.9175
chr11	83318252	83318352	protein_coding	Taf15	exon	ENSMUSG00000020680	ProperStrand	60	chr7	116663709	116663767	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.5117
chr18	10052131	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr2	138188029	138188045	protein_coding	Btbd3	intron	ENSMUSG00000062098	NonProperStrand	121	1	-7.4014
chr5	31505180	31505250	protein_coding	Ppm1g	utr3	ENSMUSG00000029147	ProperStrand	69	chr7	29136575	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	4	-8.0167
chr4	123132293	123132309	protein_coding	Macf1	exon	ENSMUSG00000028649	ProperStrand	320	chr7	87513142	87513158	protein_coding	Man2a2	exon	ENSMUSG00000038886	NonProperStrand	4	1	-15.6276
chr2	129033418	129033489	protein_coding	Slc20a1	exon	ENSMUSG00000027397	ProperStrand	81	chr7	108440949	108440967	protein_coding	Atg16l2	intron	ENSMUSG00000047767	ProperStrand	121	1	-11.3013
chr10	128009824	128009861	protein_coding	Erbb3	exon	ENSMUSG00000018166	ProperStrand	49	chr9	120038614	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.4063
chr10	122002940	122003030	LINE	L1Md_F2	L1	chr10L1Md_F2122002095	NonProperStrand	23	chr5	45401439	45401519	LINE	L1Md_F2	L1	chr5L1Md_F245401408	NonProperStrand	7	1	-19.1569
chr10	18393547	18393563	protein_coding	D10Bwg1379e	intron	ENSMUSG00000019852	NonProperStrand	120	chr11	62416574	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-3.8450
chr5	138394580	138394670	LINE	L1MA8	L1	chr5L1MA8138394269	ProperStrand	1	chr5	138394900	138394990	LINE	Lx6	L1	chr5Lx6138394877	ProperStrand	1	1	-inf
chr2	143815573	143815621	protein_coding	Rrbp1	exon	ENSMUSG00000027422	ProperStrand	76	chr11	69414482	69414498	protein_coding	Atp1b2	utr3	ENSMUSG00000041329	ProperStrand	28	1	-14.3705
chr9	43612586	43612636	protein_coding	Pvrl1	utr3	ENSMUSG00000032012	ProperStrand	45	chr1	192712615	192712631	protein_coding	Rps6kc1	exon	ENSMUSG00000089872	ProperStrand	241	1	-11.1050
chr9	68901179	68901196	protein_coding	Rora	intron	ENSMUSG00000032238	NonProperStrand	30	chr19	8963048	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.5028
chr16	23111372	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	chr15	79908927	79909022	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	85	-10.2077
chr15	69334692	69334708	DNA	Tigger13a	MER2_type	chr15Tigger13a69334182	NonProperStrand	1	chr2	130101986	130102074	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	NonProperStrand	12	1	-inf
chr16	33625643	33625661	protein_coding	Slc12a8	intron	ENSMUSG00000035506	ProperStrand	52	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.9942
chr15	100029382	100029399	protein_coding	Dip2b	exon	ENSMUSG00000023026	ProperStrand	48	chr5	108336363	108336469	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-5.3144
chr3	144812026	144813970	protein_coding	Odf2l	exon	ENSMUSG00000028256	ProperStrand	10	chr7	52382234	52382298	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	4	-19.4007
chr15	79946472	79946562	protein_coding	Syngr1	utr3	ENSMUSG00000022415	ProperStrand	51	chr3	123210853	123210933	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.3354
chr11	86914983	86915016	protein_coding	Prr11	exon	ENSMUSG00000020493	ProperStrand	2	chr17	5305696	5305713	protein_coding	Arid1b	intron	ENSMUSG00000069729	NonProperStrand	22	1	-inf
chr12	77811472	77811488	protein_coding	Spnb1	utr5	ENSMUSG00000021061	NonProperStrand	37	chr18	35714143	35714205	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.3503
chr11	53496902	53497688	protein_coding	Rad50	exon	ENSMUSG00000020380	ProperStrand	61	chr4	10918481	10918498	protein_coding	Plekhf2	utr5	ENSMUSG00000049969	NonProperStrand	3	2	-inf
chr16	87419265	87419297	protein_coding	Ltn1	intron	ENSMUSG00000052299	ProperStrand	49	chr3	121160342	121160432	protein_coding	Cnn3	utr3	ENSMUSG00000053931	ProperStrand	77	1	-13.2233
chr19	17457196	17457216	SINE	ID4_	ID	chr19ID4_17457164	NonProperStrand	7	chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-10.8545
chr6	32468778	32468795	protein_coding	Plxna4	intron	ENSMUSG00000029765	ProperStrand	15	chr2	26494794	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.7664
chr9	95525015	95525035	antisense	Gm16126	.	ENSMUSG00000086585	NonProperStrand	229	chr12	106269339	106269402	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-1.7946
chr9	119766537	119766554	LTR	RLTR13D2	ERVK	chr9RLTR13D2119766412	ProperStrand	1	chr4	131865380	131865428	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-inf
chr13	30632547	30632617	protein_coding	Uqcrfs1	utr3	ENSMUSG00000038462	ProperStrand	24	chr16	23110911	23111001	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.3518
chr2	121283939	121283958	protein_coding	2310003F16Rik	exon	ENSMUSG00000027245	ProperStrand	40	chr8	32260359	32260423	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-5.4169
chr9	57378134	57378151	protein_coding	Cox5a	exon	ENSMUSG00000000088	ProperStrand	26	chr9	120038613	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.6046
chr9	44550634	44550734	protein_coding	Arcn1	utr3	ENSMUSG00000032096	ProperStrand	35	chr1	162967523	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	10	-19.8035
chrX	34622958	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	chr8	34802358	34802417	snoRNA	ENSMUSG00000088856_SNORA48	.	ENSMUSG00000088856	ProperStrand	236	1	-1.0101
chr3	100881007	100881064	protein_coding	Ptgfrn	exon	ENSMUSG00000027864	ProperStrand	67	chr16	23111474	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-2.1734
chr7	31895791	31899711	protein_coding	Hpn	utr5	ENSMUSG00000001249	ProperStrand	126	chrX	38831793	38831810	protein_coding	Gria3	exon	ENSMUSG00000001986	ProperStrand	32	1	-13.0943
chr19	5751171	5751271	protein_coding	Ltbp3	exon	ENSMUSG00000024940	ProperStrand	11	chr11	68887021	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	2	-12.1637
chr16	85795631	85795647	protein_coding	Adamts1	utr3	ENSMUSG00000022893	ProperStrand	102	chr4	131865856	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.0181
chr18	85596133	85596151	LINE	Lx8	L1	chr18Lx885596110	NonProperStrand	3	chr6	29719006	29719106	protein_coding	Ahcyl2	exon	ENSMUSG00000029772	ProperStrand	10	1	-inf
chr2	153143173	153143189	protein_coding	Kif3b	exon	ENSMUSG00000027475	NonProperStrand	24	chr11	69481333	69481433	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	4	-15.6265
chr13	56804912	56804929	protein_coding	Smad5	utr5	ENSMUSG00000021540	ProperStrand	47	chr11	69483136	69483243	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-7.4257
chr11	75123730	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr3	108357255	108357309	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-1.9512
chr9	70960076	70960093	protein_coding	Aqp9	exon	ENSMUSG00000032204	NonProperStrand	118	chr7	116663699	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-2.7065
chrX	99383669	99383698	protein_coding	Rps4x	exon	ENSMUSG00000031320	ProperStrand	139	chr3	123210854	123210981	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-1.7570
chr11	121569212	121569228	protein_coding	Metrnl	exon	ENSMUSG00000039208	NonProperStrand	11	chr4	116828379	116828452	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-11.8422
chr8	86453777	86453808	protein_coding	Lphn1	exon	ENSMUSG00000013033	ProperStrand	221	chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	1	-5.9207
chr1	59748169	59748215	protein_coding	Nop58	intron	ENSMUSG00000026020	ProperStrand	104	chr8	129468746	129468839	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-3.3859
mmu-miR-6240	2	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr1	162967753	162967806	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	1	-3.0119
chr4	131826089	131826112	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	chr4	131865384	131865509	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-0.7486
chr10	127995905	127995925	protein_coding	Pa2g4	utr3	ENSMUSG00000025364	ProperStrand	72	chr6	124665421	124665521	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	10	-20.9614
chr2	180394482	180394582	protein_coding	Dido1	exon	ENSMUSG00000038914	ProperStrand	81	chr11	62416985	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	4	-16.7299
chr8	13416897	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr2	130103751	130103825	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	2	-3.5724
chr9	58547119	58547136	protein_coding	2410076I21Rik	intron	ENSMUSG00000074269	ProperStrand	91	chr19	8798516	8798553	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-4.4099
chrX	11635848	11635865	protein_coding	Bcor	exon	ENSMUSG00000040363	NonProperStrand	293	chr16	23110525	23110579	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-0.8594
chr8	97261510	97261531	LINE	L1MB8	L1	chr8L1MB897260936	NonProperStrand	1	chr7	13516153	13516193	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	1	-inf
chr3	85904466	85904546	snoRNA	ENSMUSG00000065847_SNORA32	.	ENSMUSG00000065847	ProperStrand	40	chr16	18240811	18240902	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	1	-9.9415
chr10	68671305	68671321	protein_coding	Rhobtb1	utr5	ENSMUSG00000019944	ProperStrand	6	chr11	119870767	119870998	protein_coding	Aatk	exon	ENSMUSG00000025375	ProperStrand	4	1	-19.3129
chr8	125202944	125202961	protein_coding	Cbfa2t3	intron	ENSMUSG00000006362	ProperStrand	41	chr10	6979588	6979652	protein_coding	Ppp1r14c	exon	ENSMUSG00000040653	ProperStrand	5	2	-20.5014
chr1	95404306	95404397	protein_coding	Sept2	utr3	ENSMUSG00000026276	ProperStrand	136	chr17	24857767	24857800	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	87	-19.6472
chr17	33960236	33961381	protein_coding	Rps28	exon	ENSMUSG00000067288	ProperStrand	52	chr7	30042849	30042880	protein_coding	Spint2	intron	ENSMUSG00000074227	ProperStrand	82	1	-12.9744
chr14	61364545	61365567	protein_coding	Spata13	exon	ENSMUSG00000021990	ProperStrand	28	chr16	23110827	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.1386
chr8	77742558	77742574	protein_coding	Rasd2	exon	ENSMUSG00000034472	NonProperStrand	237	chr4	82970142	82970160	protein_coding	Ttc39b	utr5	ENSMUSG00000038172	NonProperStrand	12	1	-13.8430
chr5	74489229	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr8	113366288	113366349	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	1	-1.8691
chr5	28396622	28396642	lincRNA	Gm16719	intron	ENSMUSG00000085535	NonProperStrand	6	chr13	68759738	68764669	protein_coding	Adcy2	exon	ENSMUSG00000021536	ProperStrand	237	1	-15.2939
chr10	80809749	80809765	protein_coding	Hmg20b	exon	ENSMUSG00000020232	ProperStrand	157	chr5	121655127	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-3.7035
chr14	46079663	46081496	protein_coding	Fermt2	exon	ENSMUSG00000037712	ProperStrand	23	chr5	121655065	121655155	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.5970
chr1	37527453	37527543	protein_coding	Mgat4a	intron	ENSMUSG00000026110	ProperStrand	16	chrX	49966917	49966984	protein_coding	Gpc3	utr5	ENSMUSG00000055653	ProperStrand	43	1	-16.7441
chr10	127179893	127179953	protein_coding	Zbtb39	exon	ENSMUSG00000044617	ProperStrand	9	chr16	23110910	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.9939
chr8	70215951	70215967	protein_coding	Psd3	utr3	ENSMUSG00000030465	NonProperStrand	9	chr1	20552542	20552558	protein_coding	Pkhd1	exon	ENSMUSG00000043760	NonProperStrand	49	1	-17.5984
chr12	104317206	104317223	protein_coding	Unc79	exon	ENSMUSG00000021198	ProperStrand	99	chr11	69483190	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-4.7097
chr14	70737894	70737910	protein_coding	Slc39a14	intron	ENSMUSG00000022094	NonProperStrand	2	chr18	36823936	36824048	protein_coding	Ankhd1	intron	ENSMUSG00000024483	ProperStrand	56	1	-20.0935
chr5	148113281	148113297	protein_coding	Cdx2	utr3	ENSMUSG00000029646	ProperStrand	276	chr6	71832570	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-2.7543
chr11	6428040	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr10	62228320	62228387	snoRNA	ENSMUSG00000080469_Snord98	.	ENSMUSG00000080469	ProperStrand	124	17	-inf
chr19	3906682	3906698	protein_coding	Tcirg1	utr5	ENSMUSG00000001750	NonProperStrand	15	chr9	50816824	50816841	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	1	-14.6312
chr17	24651096	24653483	protein_coding	Traf7	exon	ENSMUSG00000052752	ProperStrand	28	chr11	62418045	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-7.0687
chr4	118109344	118109412	protein_coding	Cdc20	exon	ENSMUSG00000006398	ProperStrand	43	chr4	55363030	55363046	protein_coding	Rad23b	utr5	ENSMUSG00000028426	ProperStrand	86	1	-13.2647
chr9	30235085	30235102	protein_coding	Snx19	exon	ENSMUSG00000031993	ProperStrand	353	chr2	130101985	130102085	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	7	-15.3579
chr18	65304408	65304426	protein_coding	Nedd4l	intron	ENSMUSG00000024589	ProperStrand	44	chr4	120689561	120689591	protein_coding	Smap2	utr5	ENSMUSG00000032870	ProperStrand	13	1	-17.1660
chr5	21263225	21263597	protein_coding	Dnajc2	exon	ENSMUSG00000029014	ProperStrand	31	chr2	166932840	166932900	protein_coding	Kcnb1	intron	ENSMUSG00000050556	NonProperStrand	6	1	-18.6658
chr1	180264477	180264514	protein_coding-noncoding	Hnrnpu	utr3	ENSMUSG00000039630	ProperStrand	12	chr12	56405292	56405375	protein_coding	1110008L16Rik	exon	ENSMUSG00000021023	ProperStrand	20	1	-18.6218
chr1	82336897	82336997	protein_coding	Rhbdd1	utr5	ENSMUSG00000026142	ProperStrand	22	chr11	77996558	77996610	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-8.0992
chr5	136712940	136712956	protein_coding	Sh2b2	intron	ENSMUSG00000005057	NonProperStrand	101	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-8.3270
chr10	92916232	92916306	protein_coding	Lta4h	utr5	ENSMUSG00000015889	ProperStrand	12	chr13	15698210	15698229	protein_coding	Gli3	intron	ENSMUSG00000021318	ProperStrand	54	1	-16.8494
chr14	80262508	80262524	lincRNA	Gm6999	intron	ENSMUSG00000075495	ProperStrand	265	chr5	121655016	121655062	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-1.2727
mmu-miR-6240	1	25	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr4	131866154	131866292	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	45	-20.0298
chr18	67975629	67976424	protein_coding	Cep192	exon	ENSMUSG00000024542	ProperStrand	59	chr2	26494708	26494768	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.1372
chr9	120483422	120483472	protein_coding	Rpl14	exon	ENSMUSG00000025794	ProperStrand	123	chr1	162965986	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-2.3321
chr10	6450631	6450649	protein_coding	Plekhg1	intron	ENSMUSG00000040624	NonProperStrand	75	chr15	79910853	79910903	protein_coding	Rpl3	exon	ENSMUSG00000060036	ProperStrand	8342	1	-3.1844
chr2	91436234	91436336	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	chr11	77995188	77995238	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	6	-8.2243
chr7	30231467	30231583	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	chr4	131865856	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	11	-3.0113
chr12	111931265	111933265	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr18	73693110	73693186	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	4	-5.0011
chr1	7349365	7349401	lincRNA	Gm16899	intron	ENSMUSG00000086461	ProperStrand	5	chr3	123210854	123210947	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	5	-inf
chr19	53461017	53461034	protein_coding	Smndc1	intron	ENSMUSG00000025024	NonProperStrand	12	chr17	35089229	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-8.7239
chr7	131137445	131137518	protein_coding	Hs3st4	intron	ENSMUSG00000078591	ProperStrand	5	chr7	117189948	117190010	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	3	-18.9846
chr17	25996060	25996076	protein_coding	Wdr90	exon	ENSMUSG00000073434	ProperStrand	91	chr4	131865855	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-2.2609
chr9	53033697	53033735	protein_coding	Ddx10	exon	ENSMUSG00000053289	ProperStrand	40	chr16	23111398	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.8604
chr1	45448521	45448537	protein_coding	Col5a2	exon	ENSMUSG00000026042	ProperStrand	184	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-3.7209
chr19	27292699	27292716	protein_coding	Vldlr	intron	ENSMUSG00000024924	NonProperStrand	36	chr7	52381737	52381762	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-8.5985
chr17	24343586	24343602	protein_coding	Ntn3	exon	ENSMUSG00000079662	ProperStrand	237	chr17	35089235	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-2.9077
chr4	116875171	116875249	snRNA	ENSMUSG00000070228_U5	.	ENSMUSG00000070228	ProperStrand	131	chr19	8799610	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-5.2343
chr15	78266116	78266216	protein_coding-noncoding	Kctd17	utr5	ENSMUSG00000033287	ProperStrand	1	chr18	78014572	78016270	protein_coding	Atp5a1	exon	ENSMUSG00000025428	ProperStrand	254	1	-inf
chr8	95376758	95376848	protein_coding	Mmp2	utr3	ENSMUSG00000031740	ProperStrand	42	chr19	8800375	8800455	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-4.1983
chr8	25299876	25299895	LTR	LTR33	ERVL	chr8LTR3325299789	NonProperStrand	10	chr9	15130714	15130753	snoRNA	ENSMUSG00000077506_Scarna9	.	ENSMUSG00000077506	ProperStrand	148	1	-15.1664
chr8	96697069	96697244	protein_coding	Mt2	exon	ENSMUSG00000031762	ProperStrand	71	chr16	23109058	23109093	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-6.9471
chr11	102662460	102662476	protein_coding	Gjc1	exon	ENSMUSG00000034520	NonProperStrand	39	chr16	23111372	23111455	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-3.4767
chr2	147009944	147009961	lincRNA	Nkx2-2as	exon	ENSMUSG00000086509	ProperStrand	6	chr1	93263065	93263081	protein_coding	Fam132b	exon	ENSMUSG00000047443	NonProperStrand	98	1	-16.9225
chrX	163513688	163513706	SINE	ID_B1	B4	chrXID_B1163513671	ProperStrand	2	chr7	117166761	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-12.2088
chr13	74050571	74050597	protein_coding	Trip13	utr3	ENSMUSG00000021569	ProperStrand	6	chr4	131908236	131908355	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-5.6461
chr4	148494139	148494155	protein_coding	Dffa	utr3	ENSMUSG00000028974	ProperStrand	55	chr10	23505151	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.3541
chr12	73895563	73895619	protein_coding	Ppm1a	utr3	ENSMUSG00000021096	ProperStrand	53	chr10	110918549	110918639	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-3.6779
chr2	11602046	11603567	protein_coding	Il2ra	exon	ENSMUSG00000026770	ProperStrand	17	chr15	34370589	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-5.9911
chr17	74626329	74626416	protein_coding	Memo1	intron	ENSMUSG00000058704	ProperStrand	3	chr4	131865948	131865978	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.6896
chr8	8681423	8681523	protein_coding	Arglu1	intron	ENSMUSG00000040459	ProperStrand	20	chr1	59761640	59761716	snoRNA	ENSMUSG00000089093_Snord11	.	ENSMUSG00000089093	ProperStrand	193	1	-13.1997
chr11	82614857	82614915	protein_coding	Lig3	exon	ENSMUSG00000020697	ProperStrand	34	chr19	38869531	38869547	protein_coding	Noc3l	exon	ENSMUSG00000024999	NonProperStrand	149	1	-12.6345
chr1	58462194	58462241	protein_coding	Bzw1	utr3	ENSMUSG00000051223	ProperStrand	14	chr9	15119631	15119684	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.3767
chr15	101039636	101041208	protein_coding	Acvr1b	exon	ENSMUSG00000000532	ProperStrand	259	chr7	150717298	150717348	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	2	-4.8179
chr15	99454061	99454161	protein_coding	Racgap1	intron	ENSMUSG00000023015	ProperStrand	47	chr11	106362337	106362381	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-6.3242
chr4	143583129	143583145	protein_coding	Pramef17	exon	ENSMUSG00000078509	ProperStrand	1	chr1	162965531	162965584	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-inf
chr6	71832550	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	chr6	124665418	124665521	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	2	-0.9961
chr5	149163718	149163797	protein_coding	Slc7a1	exon	ENSMUSG00000041313	ProperStrand	65	chr18	35714164	35714254	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	3	-8.2884
chr10	79282488	79282540	protein_coding	Palm	utr3	ENSMUSG00000035863	ProperStrand	58	chr4	131866169	131866259	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	4	-12.3099
chr6	112689098	112689322	protein_coding	Srgap3	exon	ENSMUSG00000030257	NonProperStrand	208	chr2	145077957	145209256	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-5.2745
chr14	70787670	70787687	protein_coding	Piwil2	intron	ENSMUSG00000033644	ProperStrand	36	chr17	39985566	39985628	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-6.9452
chr1	95684547	95684563	protein_coding	Atg4b	utr3	ENSMUSG00000026280	NonProperStrand	1	chr15	82640026	82640126	protein_coding	Tcf20	utr3	ENSMUSG00000041852	ProperStrand	658	1	-inf
chr7	87455643	87455724	protein_coding	Prc1	exon	ENSMUSG00000038943	ProperStrand	35	chr10	127521229	127521270	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	2	-15.6295
chr9	40612310	40612346	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr11	6520336	6520459	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	1	-2.7706
chr7	26076274	26076481	protein_coding	Cic	exon	ENSMUSG00000005442	ProperStrand	80	chr5	130300489	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.0303
chr11	72204834	72204890	protein_coding	Smtnl2	exon	ENSMUSG00000045667	ProperStrand	30	chr16	23111373	23111479	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-4.1722
chr8	87830131	87830172	protein_coding	Orc6	exon	ENSMUSG00000031697	ProperStrand	23	chr12	16946855	16946923	snoRNA	ENSMUSG00000064620_SNORA32	.	ENSMUSG00000064620	ProperStrand	165	1	-13.2246
chr6	70918283	70918300	SINE	B1F1	Alu	chr6B1F170918156	NonProperStrand	7	chr19	4193816	4193864	protein_coding	Ppp1ca	exon	ENSMUSG00000040385	ProperStrand	40	1	-18.3383
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr5	77345070	77347128	protein_coding	Ppat	exon	ENSMUSG00000029246	ProperStrand	55	2	-10.5786
chr15	50037110	50037190	LINE	L1Md_F	L1	chr15L1Md_F50034441	NonProperStrand	1	chr7	54443632	54443722	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	1	-inf
chr14	14789962	14789996	protein_coding	Thoc7	intron	ENSMUSG00000053453	ProperStrand	22	chr3	123210854	123210914	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	4	-12.8581
chr11	68717963	68717996	protein_coding	Rpl26	utr3	ENSMUSG00000060938	ProperStrand	130	chr17	24368380	24368413	protein_coding	Ccnf	exon	ENSMUSG00000072082	ProperStrand	149	1	-9.9360
chr11	98568431	98568531	protein_coding	Med24	exon	ENSMUSG00000017210	ProperStrand	28	chr16	23110531	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	8	-20.8372
chr12	32622561	32622580	protein_coding	Hbp1	exon	ENSMUSG00000002996	ProperStrand	26	chr2	83693562	83693578	protein_coding	Fam171b	exon	ENSMUSG00000048388	NonProperStrand	175	1	-12.8573
chr1	71698118	71698194	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr10	60708780	60708796	protein_coding	Adamts14	exon	ENSMUSG00000059901	ProperStrand	17	1	-10.3855
chr2	131878295	131878311	protein_coding	Slc23a2	utr3	ENSMUSG00000027340	ProperStrand	44	chr10	90581032	90581122	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	4	-16.7375
chr2	90235304	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	36000485	36000501	protein_coding	Nrm	exon	ENSMUSG00000059791	ProperStrand	253	1	-1.9055
chr7	29304251	29304271	LINE	Lx8	L1	chr7Lx829303975	ProperStrand	1	chr1	162965531	162965588	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-inf
chr8	28273539	28273557	protein_coding	Rab11fip1	intron	ENSMUSG00000031488	NonProperStrand	9	chr16	23110915	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.9939
chr5	111203894	111203928	protein_coding	Pus1	exon	ENSMUSG00000029507	ProperStrand	10	chr11	51551341	51551425	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	3	-20.6442
chr7	72459822	72459871	protein_coding	Tjp1	exon	ENSMUSG00000030516	ProperStrand	78	chr4	131865384	131865474	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	2	-5.9765
chr10	7357817	7357871	protein_coding	Pcmt1	utr3	ENSMUSG00000019795	ProperStrand	55	chr4	131865966	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.9045
chr16	20508804	20508822	protein_coding	Eif2b5	exon	ENSMUSG00000003235	ProperStrand	38	chr8	73419656	73419683	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.9743
chr14	66472943	66475289	protein_coding	Ccdc25	exon	ENSMUSG00000022035	ProperStrand	15	chr5	111121066	111121132	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-9.2302
chr8	87359282	87359317	protein_coding	Rad23a	utr3	ENSMUSG00000003813	ProperStrand	10	chr7	29073210	29073330	protein_coding	BC089491	exon	ENSMUSG00000046750	ProperStrand	62	1	-16.9726
chr4	63389602	63389618	protein_coding	Tnfsf15	utr3	ENSMUSG00000050395	NonProperStrand	121	chr10	90581241	90581282	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-3.4856
chr17	32203719	32203799	LTR	RMER19A	ERVK	chr17RMER19A32203719	ProperStrand	1	chr17	32203579	32203669	SINE	B1_Mm	Alu	chr17B1_Mm32203512	NonProperStrand	1	1	-inf
chr10	120899463	120899526	protein_coding	Rassf3	intron	ENSMUSG00000025795	ProperStrand	26	chr17	35088971	35089025	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-7.5334
chr11	95630247	95630347	protein_coding	Zfp652	utr3	ENSMUSG00000075595	ProperStrand	48	chr4	131866237	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-4.0833
chr13	55671323	55671378	protein_coding	Fam193b	utr5	ENSMUSG00000021495	ProperStrand	51	chr11	97631139	97631158	tRNA	tRNA1444-CysGCA	.	415107	ProperStrand	91	1	-12.8038
chr1	87961584	87961603	protein_coding	Psmd1	intron	ENSMUSG00000026229	NonProperStrand	3	chr10	110918549	110918639	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-9.6547
chr9	50367389	50369345	protein_coding	Tex12	utr5	ENSMUSG00000032065	ProperStrand	4	chr16	90862192	90862208	protein_coding	4931408A02Rik	intron	ENSMUSG00000039903	ProperStrand	14	1	-inf
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr12	109512722	109512738	protein_coding	Ccdc85c	exon	ENSMUSG00000084883	ProperStrand	157	1	-6.6798
chr17	24858025	24858125	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr8	73419657	73419773	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	4	-2.8528
chr2	26771917	26771936	protein_coding	Surf2	utr5	ENSMUSG00000014873	ProperStrand	12	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.6729
chr5	135857805	135857900	protein_coding	Pom121	exon	ENSMUSG00000053293	ProperStrand	127	chr11	62418018	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-4.1157
chr9	22180733	22180790	protein_coding	Anln	exon	ENSMUSG00000036777	ProperStrand	133	chr17	35299541	35299631	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-3.2849
chr16	42539763	42539780	LINE	L2a	L2	chr16L2a42539730	NonProperStrand	11	chr19	8963042	8963078	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.4574
chr7	112630313	112630330	protein_coding	Prkcdbp	exon	ENSMUSG00000037060	ProperStrand	8	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-13.1128
chr15	99988398	99990961	protein_coding	Dip2b	exon	ENSMUSG00000023026	ProperStrand	48	chr5	147646766	147646846	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	1	-8.4054
chr7	29171541	29171558	protein_coding	Med29	utr3	ENSMUSG00000003444	NonProperStrand	134	chr17	56563520	56563610	protein_coding	Ptprs	exon	ENSMUSG00000013236	ProperStrand	152	1	-9.8354
chr17	95160908	95218242	protein_coding	2610044O15Rik	exon	ENSMUSG00000066057	NonProperStrand	70	chr7	29136553	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	5	-10.3332
chr5	31203947	31203989	protein_coding	Agbl5	intron	ENSMUSG00000029165	NonProperStrand	1	chr7	148634699	148634789	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-inf
chr14	121642743	121642759	protein_coding	Farp1	exon	ENSMUSG00000025555	ProperStrand	18	chr5	54389948	54389965	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	1	-13.2251
chr18	82773672	82773688	protein_coding	Zfp236	exon	ENSMUSG00000041258	NonProperStrand	117	chr11	98878343	98878371	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-4.9802
chr5	66182258	66182308	protein_coding	N4bp2	exon	ENSMUSG00000037795	ProperStrand	30	chr18	59336283	59336301	protein_coding	Chsy3	intron	ENSMUSG00000058152	NonProperStrand	3	1	-inf
chr1	162881210	162881760	protein_coding	Rc3h1	exon	ENSMUSG00000040423	ProperStrand	13	chr16	23111449	23111505	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.8569
chr17	25119727	25119795	protein_coding	Cramp1l	exon	ENSMUSG00000038002	ProperStrand	22	chr4	131866197	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-5.5985
chr11	33126786	33126804	protein_coding	Ranbp17	intron	ENSMUSG00000040594	ProperStrand	20	chr15	76346673	76346690	protein_coding	Scrt1	utr3	ENSMUSG00000048385	NonProperStrand	13	1	-18.8015
chr5	74489543	74489586	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chrX	11635848	11635865	protein_coding	Bcor	exon	ENSMUSG00000040363	NonProperStrand	293	1	-2.6603
chr12	73922987	73923004	LTR	RMER5	ERV1	chr12RMER573922948	NonProperStrand	24	chr1	190797976	190798031	protein_coding	Kctd3	exon	ENSMUSG00000026608	ProperStrand	28	1	-16.6724
chr10	127428422	127428438	protein_coding	Hsd17b6	exon	ENSMUSG00000025396	NonProperStrand	68	chr18	10013305	10013365	protein_coding	Usp14	intron	ENSMUSG00000047879	ProperStrand	13	1	-16.1572
chr10	39217942	39217959	protein_coding	Fyn	intron	ENSMUSG00000019843	NonProperStrand	17	chr8	26684395	26684444	protein_coding	Fgfr1	utr3	ENSMUSG00000031565	ProperStrand	10	1	-19.2790
chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	chr18	75161533	75161553	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-2.6388
chr4	116302398	116302488	SINE	B1_Mus1	Alu	chr4B1_Mus1116302407	NonProperStrand	1	chr3	116443382	116443462	protein_coding	Agl	utr3	ENSMUSG00000033400	NonProperStrand	6	1	-inf
chr16	36722463	36722563	protein_coding	Ildr1	exon	ENSMUSG00000022900	ProperStrand	17	chr9	64023725	64023746	snoRNA	ENSMUSG00000064918_SNORD18	.	ENSMUSG00000064918	ProperStrand	370	1	-12.2298
chr1	133252374	133252439	protein_coding	Srgap2	intron	ENSMUSG00000026425	ProperStrand	299	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-3.8729
chr11	95835478	95835516	protein_coding	Igf2bp1	exon	ENSMUSG00000013415	ProperStrand	140	chr9	15119394	15119429	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	2	-5.9549
chr7	134158737	134158810	protein_coding	2900092E17Rik	utr3	ENSMUSG00000030680	ProperStrand	11	chr7	52715007	52715076	protein_coding	Ftl1	utr5	ENSMUSG00000050708	ProperStrand	807	2	-18.0390
chr6	29665358	29665374	protein_coding	Tspan33	intron	ENSMUSG00000001763	NonProperStrand	4	chr5	135529856	135529988	snoRNA	ENSMUSG00000088008_SCARNA20	.	ENSMUSG00000088008	ProperStrand	139	1	-17.2117
chr1	162965977	162965999	non_coding	Gas5	.	ENSMUSG00000053332	ProperStrand	144	chr7	35983752	35983768	protein_coding	Slc7a10	exon	ENSMUSG00000030495	NonProperStrand	33	1	-12.7625
chr18	32405206	32405222	protein_coding	Ercc3	exon	ENSMUSG00000024382	ProperStrand	280	chr1	24621441	24621492	protein_coding	Gm10925	utr5	ENSMUSG00000090378	ProperStrand	320	1	-6.8887
chr3	95673705	95673721	protein_coding	Mrps21	intron	ENSMUSG00000054312	NonProperStrand	1	chr15	34370545	34370633	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-inf
chr1	145626057	145626177	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	chr5	130300434	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	6	-1.8293
chr4	131908722	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	chr6	73091476	73091502	snoRNA	ENSMUSG00000065072_SNORA73	.	ENSMUSG00000065072	ProperStrand	1	1	-inf
chr7	125987970	125988060	protein_coding	2310008H09Rik	utr3	ENSMUSG00000030980	ProperStrand	42	chr10	23505192	23505272	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.7547
chr4	149611348	149611384	protein_coding	Eno1	utr5	ENSMUSG00000063524	ProperStrand	432	chr17	13112449	13112528	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-1.2106
chr2	30328261	30328351	protein_coding	Ier5l	utr3	ENSMUSG00000089762	ProperStrand	4	chr16	23111374	23111454	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-6.3168
chrX	34454758	34454774	protein_coding	Sept6	utr3	ENSMUSG00000050379	ProperStrand	29	chr11	48670537	48670559	tRNA	tRNA2021-LeuAAG	.	1732479	ProperStrand	13	1	-17.9054
chr9	78023165	78023245	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr17	86846938	86846954	protein_coding	Prkce	intron	ENSMUSG00000045038	NonProperStrand	24	2	-12.3680
chr6	70794801	70794819	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chr5	89383967	89457318	protein_coding	Slc4a4	exon	ENSMUSG00000060961	NonProperStrand	195	1	-9.0599
chr16	23111654	23111897	protein_coding	Eif4a2	exon	ENSMUSG00000022884	ProperStrand	356	chr4	43271097	43271113	protein_coding	Unc13b	exon	ENSMUSG00000028456	NonProperStrand	11	1	-13.2113
chr3	142351261	142351282	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr15	77597977	77597993	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	1	-3.4407
chr2	119772052	119772142	protein_coding	Mga	exon	ENSMUSG00000033943	ProperStrand	180	chr5	74489543	74489623	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-1.8674
chr9	59527045	59527084	protein_coding	Pkm2	utr3	ENSMUSG00000032294	ProperStrand	1296	chr9	65435563	65435579	protein_coding	Pif1	utr5	ENSMUSG00000041064	NonProperStrand	18	3	-19.3518
chr15	36034267	36034292	protein_coding	Rgs22	exon	ENSMUSG00000037627	ProperStrand	5	chr4	131908689	131908789	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-14.4653
chr16	23110558	23111506	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr16	23110455	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	12	-7.9086
chr1	181067485	181067503	protein_coding	Smyd3	intron	ENSMUSG00000055067	NonProperStrand	190	chr18	35714144	35714251	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-1.5092
chr1	134349725	134349772	protein_coding	Dstyk	exon	ENSMUSG00000042046	ProperStrand	11	chr4	131908730	131908799	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-7.0530
chr12	75046905	75046976	protein_coding	Hif1a	utr3	ENSMUSG00000021109	ProperStrand	20	chr4	131865868	131865958	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	5	-15.9276
chr16	55980929	55982346	protein_coding	Rpl24	exon	ENSMUSG00000022601	ProperStrand	149	chr8	73419657	73419763	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	4	-6.4886
chr13	9833553	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr11	33061171	33061593	protein_coding	Npm1	exon	ENSMUSG00000057113	ProperStrand	352	1	-1.7917
chr15	84779614	84779670	protein_coding	5031439G07Rik	utr3	ENSMUSG00000036046	ProperStrand	3	chr18	35714200	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-9.6483
chr7	130143158	130143248	protein_coding	Rbbp6	exon	ENSMUSG00000030779	ProperStrand	46	chr12	60141413	60141493	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-7.3585
chr1	155750231	155751685	protein_coding	Glul	exon	ENSMUSG00000026473	ProperStrand	54	chr11	68887041	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-4.3440
chrX	7181340	7181430	protein_coding	Ccdc22	exon	ENSMUSG00000031143	ProperStrand	4	chr17	24857743	24857823	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-7.6570
chr19	41844468	41844558	protein_coding	Arhgap19	utr3	ENSMUSG00000025154	ProperStrand	34	chr4	131865895	131865975	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.7115
chr1	167810275	167810345	protein_coding	Pou2f1	exon	ENSMUSG00000026565	ProperStrand	34	chr4	131908810	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.0811
chr6	142449896	142453950	protein_coding	Ldhb	exon	ENSMUSG00000030246	ProperStrand	224	chrX	113862546	113862569	snoRNA	ENSMUSG00000088518_SNORA9	.	ENSMUSG00000088518	ProperStrand	280	1	-7.5943
chr11	102294588	102294611	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr11	68886928	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	10	-13.0871
chr17	35822057	35822257	protein_coding	Ddr1	exon	ENSMUSG00000003534	ProperStrand	129	chr11	116938688	116938749	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-4.6701
chr9	65442591	65442681	protein_coding	Pif1	utr3	ENSMUSG00000041064	ProperStrand	14	chr4	131908265	131908345	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.9265
chr18	31560068	31560158	LINE	L1Md_F2	L1	chr18L1Md_F231559666	ProperStrand	1	chr14	34780677	34780757	protein_coding	Zfp488	utr3	ENSMUSG00000044519	NonProperStrand	39	1	-inf
chr9	88419023	88419041	SINE	B4	B4	chr9B488418988	ProperStrand	75	chr5	136364194	136364239	protein_coding	Hspb1	exon	ENSMUSG00000004951	ProperStrand	25	2	-19.4892
chr19	23696961	23696979	protein_coding	1700028P14Rik	intron	ENSMUSG00000033053	ProperStrand	2	chr5	138749795	138749830	protein_coding	Stag3	exon	ENSMUSG00000036928	ProperStrand	53	1	-inf
chr11	82601307	82602322	protein_coding	Lig3	exon	ENSMUSG00000020697	ProperStrand	34	chr4	131908236	131908299	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.3115
chr2	180646462	180646532	protein_coding	Ythdf1	exon	ENSMUSG00000038848	ProperStrand	59	chr17	24857717	24857807	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.3250
chr10	53260875	53261344	protein_coding	Mcm9	exon	ENSMUSG00000058298	NonProperStrand	16	chr4	122968648	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-8.9414
chr11	88155153	88155227	protein_coding	Msi2	utr3	ENSMUSG00000069769	ProperStrand	159	chr1	89681161	89681251	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-3.5863
chr17	29797444	29797462	protein_coding	Ftsjd2	intron	ENSMUSG00000024019	NonProperStrand	13	chr1	24621447	24621474	protein_coding	Gm10925	exon	ENSMUSG00000090378	ProperStrand	320	1	-13.0760
chr9	94586847	94586864	protein_coding	Slc9a9	intron	ENSMUSG00000031129	ProperStrand	7	chr3	123210902	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-6.1463
chr1	93263065	93263081	protein_coding	Fam132b	exon	ENSMUSG00000047443	NonProperStrand	98	chr15	98356818	98356899	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	5	-20.0579
chr7	128086008	128088077	protein_coding	Polr3e	exon	ENSMUSG00000030880	ProperStrand	43	chr17	24857723	24857846	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	13	-inf
chr11	106916311	106916357	protein_coding	Bptf	exon	ENSMUSG00000040481	ProperStrand	70	chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	1	-8.4543
mmu-miR-6240	2	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr8	87599209	87599722	protein_coding	Wdr83	exon	ENSMUSG00000005150	ProperStrand	3	2	-20.6577
chr5	8399759	8403083	protein_coding	Dbf4	exon	ENSMUSG00000002297	ProperStrand	38	chr2	26493381	26493481	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-7.6682
chr15	88988882	88989068	protein_coding	Plxnb2	exon	ENSMUSG00000036606	ProperStrand	119	chr18	35716820	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-3.5518
chr2	76471660	76471676	protein_coding	Prkra	exon	ENSMUSG00000002731	NonProperStrand	65	chr19	8800085	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-7.4484
chr3	137849424	137849440	protein_coding	4930579F01Rik	utr5	ENSMUSG00000012042	NonProperStrand	156	chr16	30351092	30351144	protein_coding	Atp13a3	exon	ENSMUSG00000022533	ProperStrand	45	1	-11.9761
chr15	79496155	79496312	protein_coding	Cby1	exon	ENSMUSG00000022428	ProperStrand	7	chr10	39978274	39978364	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-9.8374
chr1	174210708	174210726	protein_coding	Igsf8	intron	ENSMUSG00000038034	ProperStrand	25	chr9	15514257	15514276	protein_coding	Slc36a4	exon	ENSMUSG00000043885	ProperStrand	94	1	-14.1791
chr6	119304047	119304065	protein_coding	Adipor2	utr3	ENSMUSG00000030168	ProperStrand	79	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-4.6801
chr5	74489202	74489262	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr7	31895791	31899711	protein_coding	Hpn	utr5	ENSMUSG00000001249	ProperStrand	126	1	-4.1931
chr13	23775374	23775395	protein_coding	Hist1h2ac	utr3	ENSMUSG00000069270	ProperStrand	22	chr17	35088957	35089023	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	3	-17.5931
chr8	4267337	4267649	protein_coding	Timm44	exon	ENSMUSG00000002949	ProperStrand	63	chr19	8798484	8798548	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-5.1168
chr2	28368859	28368877	protein_coding	Ralgds	utr5	ENSMUSG00000026821	NonProperStrand	60	chr14	76247725	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	6	-18.9468
chr12	92794852	92794966	protein_coding	Gtf2a1	utr3	ENSMUSG00000020962	ProperStrand	61	chr2	157388966	157388998	protein_coding	Blcap	intron	ENSMUSG00000067787	ProperStrand	13	7	-19.1562
chrX	20249979	20250026	protein_coding	Uba1	exon	ENSMUSG00000001924	ProperStrand	156	chr19	8798773	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	3	-7.6769
chr9	106760630	106760668	protein_coding	Vprbp	exon	ENSMUSG00000040325	ProperStrand	35	chr16	23110916	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.8578
chr4	19436980	19436997	protein_coding	Cngb3	utr3	ENSMUSG00000056494	NonProperStrand	3	chr16	23111457	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-6.9982
chr12	17552966	17553034	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr9	36980462	36980490	snoRNA	ENSMUSG00000077483_SNORA42	.	ENSMUSG00000077483	ProperStrand	1	1	-inf
chr1	31003153	31003250	protein_coding	Ptp4a1	utr5	ENSMUSG00000026064	ProperStrand	26	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.7765
chr19	45867552	45867568	protein_coding	Kcnip2	utr3	ENSMUSG00000025221	NonProperStrand	6	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-10.5918
chr18	32401597	32401687	protein_coding	Ercc3	intron	ENSMUSG00000024382	NonProperStrand	1	chr18	50336828	50336918	protein_coding	Hsd17b4	intron	ENSMUSG00000024507	NonProperStrand	3	1	-inf
chr1	162999305	163000218	protein_coding	Dars2	exon	ENSMUSG00000026709	ProperStrand	14	chr10	62285388	62285437	protein_coding	Tet1	exon	ENSMUSG00000047146	ProperStrand	286	1	-13.1476
chr19	7681629	7681645	protein_coding	Lgals12	utr5	ENSMUSG00000024972	ProperStrand	10	chr7	129432968	129434039	protein_coding	Prkcb	exon	ENSMUSG00000052889	ProperStrand	16	1	-19.9348
chr2	10156793	10160200	protein_coding	Itih5	exon	ENSMUSG00000025780	ProperStrand	15	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-11.7436
chr19	44188441	44188531	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr7	149057908	149057929	protein_coding	Muc5b	intron	ENSMUSG00000066108	ProperStrand	5	1	-12.9514
chr7	19942886	19942923	protein_coding	Cd3eap	exon	ENSMUSG00000047649	ProperStrand	4	chr3	95980284	95980322	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-12.5151
chr7	112554284	112554302	protein_coding	Cnga4	exon	ENSMUSG00000030897	NonProperStrand	1	chr19	8798484	8798548	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-inf
chr4	137857208	137857239	protein_coding	Kif17	utr3	ENSMUSG00000028758	ProperStrand	15	chr5	32657192	32657208	protein_coding	Plb1	exon	ENSMUSG00000029134	ProperStrand	50	1	-16.4860
chr17	34748763	34749239	protein_coding	Agpat1	exon	ENSMUSG00000034254	ProperStrand	28	chr7	117189955	117190035	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.7726
chr10	122590993	122591014	protein_coding	Usp15	intron	ENSMUSG00000020124	ProperStrand	24	chr18	35714186	35714286	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-5.1913
chr7	38804159	38804197	protein_coding	C80913	exon	ENSMUSG00000030421	ProperStrand	25	chr17	35089183	35089211	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-7.2235
chr10	42334108	42334125	protein_coding	Ostm1	intron	ENSMUSG00000038280	ProperStrand	14	chr14	76247711	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	3	-16.1421
chr11	70051882	70051924	protein_coding	Rnasek	exon	ENSMUSG00000040904	ProperStrand	7	chr17	35299507	35299599	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	4	-20.0787
chr9	53308781	53308808	protein_coding	Atm	exon	ENSMUSG00000034218	ProperStrand	17	chr7	29136525	29136600	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.6910
chr10	61130386	61133223	protein_coding	Ppa1	exon	ENSMUSG00000020089	ProperStrand	30	chr9	15119646	15119726	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-6.5829
chr9	120039567	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	chr11	74718931	74718957	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	11	-11.2063
chr14	33153227	33153832	protein_coding	Ogdhl	exon	ENSMUSG00000021913	ProperStrand	182	chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-5.5494
chr1	88250388	88251620	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chr19	44188521	44188611	snoRNA	ENSMUSG00000077391_SNORA12	.	ENSMUSG00000077391	ProperStrand	506	1	-3.2558
chr5	34112034	34112050	protein_coding	Letm1	exon	ENSMUSG00000005299	NonProperStrand	145	chr11	106362637	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-5.6632
chr5	21272447	21274268	protein_coding	Dnajc2	exon	ENSMUSG00000029014	ProperStrand	31	chr11	69483198	69483279	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	5	-15.5039
chr4	133261476	133261492	protein_coding	Arid1a	intron	ENSMUSG00000007880	NonProperStrand	7	chr5	115322978	115322994	protein_coding	4930519G04Rik	intron	ENSMUSG00000029564	ProperStrand	22	1	-19.3146
chr16	37777391	37777408	protein_coding	Fstl1	exon	ENSMUSG00000022816	ProperStrand	179	chr13	49810249	49811101	protein_coding	Iars	exon	ENSMUSG00000037851	ProperStrand	95	1	-10.1973
chr16	36915750	36915840	protein_coding	Golgb1	exon	ENSMUSG00000034243	ProperStrand	92	chr15	34370580	34370660	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-2.7794
chr8	74178854	74178909	protein_coding	Unc13a	exon	ENSMUSG00000034799	ProperStrand	13	chr16	23110968	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.3283
chr14	56159295	56159311	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	chr1	162967518	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-1.4891
chr11	46068104	46071059	protein_coding	Cyfip2	exon	ENSMUSG00000020340	ProperStrand	28	chr9	15119646	15119736	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.0206
chr13	38075341	38077147	protein_coding	Ssr1	exon	ENSMUSG00000021427	ProperStrand	65	chr9	15118285	15118375	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.3202
chr9	20694328	20695091	protein_coding	Ppan	exon	ENSMUSG00000004100	ProperStrand	65	chr7	116664794	116664884	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-6.4182
chr4	56819602	56819635	protein_coding	BC026590	utr3	ENSMUSG00000038827	ProperStrand	3	chr2	26494711	26494798	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-15.5516
chr15	36022621	36022638	protein_coding	Rgs22	exon	ENSMUSG00000037627	NonProperStrand	1	chr2	130102035	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-inf
chr4	43510628	43510694	protein_coding-noncoding	E130306D19Rik	utr3	ENSMUSG00000051517	ProperStrand	4	chr3	55890182	55890201	protein_coding	Nbea	utr5	ENSMUSG00000027799	NonProperStrand	115	1	-17.6227
chr2	35037525	35037558	protein_coding	Rab14	utr3	ENSMUSG00000026878	ProperStrand	21	chr8	129468746	129468836	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	2	-10.5241
chr10	61753020	61753055	protein_coding	Hk1	exon	ENSMUSG00000037012	ProperStrand	84	chr9	15119719	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.0643
chr3	90152590	90153294	protein_coding	Gatad2b	exon	ENSMUSG00000042390	ProperStrand	21	chr19	8800412	8800443	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	3	-13.0432
chr2	165514695	165514715	protein_coding	Eya2	intron	ENSMUSG00000017897	ProperStrand	6	chr3	97817679	97851651	protein_coding	Notch2	exon	ENSMUSG00000027878	ProperStrand	86	1	-17.2253
chr5	88931312	88931329	protein_coding	Enam	exon	ENSMUSG00000029286	NonProperStrand	1	chr9	44143449	44143539	protein_coding	H2afx	utr3	ENSMUSG00000049932	ProperStrand	137	1	-inf
chr16	72800514	72800532	protein_coding	Robo1	intron	ENSMUSG00000022883	NonProperStrand	188	chr9	15119967	15120012	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-5.0116
chrX	39539032	39539054	protein_coding	Stag2	intron	ENSMUSG00000025862	ProperStrand	10	chr14	57204539	57204555	protein_coding	Parp4	exon	ENSMUSG00000054509	NonProperStrand	113	1	-15.7275
chr14	61960031	61960131	protein_coding	Ebpl	exon	ENSMUSG00000021928	ProperStrand	3	chr16	23110970	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr2	163278122	163278165	protein_coding	Gdap1l1	intron	ENSMUSG00000017943	ProperStrand	3	chr3	89586431	89586471	protein_coding	Ube2q1	utr3	ENSMUSG00000042572	ProperStrand	32	2	-inf
chr15	99239695	99239794	protein_coding	Tmbim6	utr3	ENSMUSG00000023010	ProperStrand	64	chr7	117166794	117166827	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	4	-14.7795
chr6	135015780	135028566	protein_coding	Gprc5a	utr5	ENSMUSG00000046733	ProperStrand	7	chr11	68886963	68887032	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-8.4665
chr8	32229017	32229057	protein_coding	Rnf122	exon	ENSMUSG00000039328	ProperStrand	3	chr17	5347022	5347040	protein_coding	Arid1b	utr3	ENSMUSG00000069729	NonProperStrand	22	1	-inf
chr11	60716778	60716803	protein_coding	Gm16515	utr3	ENSMUSG00000018931	ProperStrand	5	chr18	35714145	35714262	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-8.4504
chr13	51743567	51743663	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	chr7	52382753	52382809	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	4	-4.6790
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr8	26883767	26883783	protein_coding	Bag4	intron	ENSMUSG00000037316	NonProperStrand	14	1	-11.5511
chr5	116011197	116011383	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	chr7	148634773	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-1.3205
chr2	69835730	69835771	protein_coding	Ubr3	intron	ENSMUSG00000044308	ProperStrand	62	chr4	131908690	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-2.2896
chr18	42374460	42376541	protein_coding	Lars	exon	ENSMUSG00000024493	ProperStrand	69	chr7	117190037	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.0795
chr6	39046627	39046645	protein_coding	Parp12	exon	ENSMUSG00000038507	ProperStrand	24	chr4	131908236	131908344	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-7.6045
chr3	101395332	101395367	protein_coding	Atp1a1	exon	ENSMUSG00000033161	ProperStrand	316	chrX	91368707	91368723	protein_coding	Zfx	utr5	ENSMUSG00000079509	ProperStrand	6	1	-14.7494
chr17	36323033	36323049	protein_coding	H2-T3	utr3	ENSMUSG00000054128	NonProperStrand	25	chr1	88247840	88247873	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-6.8271
chr17	36097663	36097764	protein_coding	Abcf1	exon	ENSMUSG00000038762	ProperStrand	206	chr15	75667110	75667128	protein_coding	Zc3h3	intron	ENSMUSG00000075600	NonProperStrand	3	1	-17.3166
chr13	8766517	8766607	protein_coding	Adarb2	utr3	ENSMUSG00000052551	NonProperStrand	61	chr11	116938557	116938637	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-6.1266
chr7	86609715	86609783	protein_coding	Polg	exon	ENSMUSG00000039176	ProperStrand	93	chr5	111121104	111121194	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-5.5731
chr6	82696700	82696739	protein_coding	Hk2	intron	ENSMUSG00000000628	ProperStrand	88	chr17	35087894	35087943	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-4.4625
chr2	103608586	103608603	protein_coding	Caprin1	exon	ENSMUSG00000027184	ProperStrand	145	chr11	80415108	80415125	protein_coding	Myo1d	exon	ENSMUSG00000035441	ProperStrand	144	1	-9.7858
chr11	69266813	69266829	protein_coding	Dnahc2	exon	ENSMUSG00000005237	ProperStrand	95	chr18	33954842	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-4.6875
chr1	162965529	162965601	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr5	108336363	108336495	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	26	-1.9930
chr4	19450377	19450436	protein_coding	Cpne3	exon	ENSMUSG00000028228	ProperStrand	7	chr7	52381972	52382010	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	4	-20.3635
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr7	54110438	54110528	protein_coding	Ldha	utr3	ENSMUSG00000063229	ProperStrand	280	2	-11.7491
chrX	130496426	130496668	protein_coding	Sytl4	exon	ENSMUSG00000031255	ProperStrand	169	chr1	162965530	162965598	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	4	-6.2887
chr12	100375451	100375471	LTR	MTE2a	MaLR	chr12MTE2a100375132	ProperStrand	1	chr19	8799581	8799623	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-inf
chr11	119951947	119952047	protein_coding	2410002I01Rik	utr3	ENSMUSG00000025377	ProperStrand	9	chr16	23111460	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-7.7762
chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	chr14	34776834	34776850	protein_coding	Rbp3	utr3	ENSMUSG00000041534	NonProperStrand	41	1	-11.3870
chr11	69002198	69002214	protein_coding	Alox8	exon	ENSMUSG00000020891	NonProperStrand	31	chr8	129468746	129468846	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-5.6976
chr19	11862722	11866278	protein_coding	Stx3	exon	ENSMUSG00000041488	ProperStrand	37	chr18	35716852	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.0044
chr5	75473198	75473215	protein_coding	Gsx2	utr3	ENSMUSG00000035946	ProperStrand	307	chr5	108334195	108334289	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-1.8958
chr10	127684279	127684450	protein_coding	Timeless	exon	ENSMUSG00000039994	ProperStrand	53	chr12	55797769	55797859	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	3	-17.6008
chr18	78220085	78220175	protein_coding	5430411K18Rik	exon	ENSMUSG00000039840	ProperStrand	17	chr4	131865376	131865456	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-6.4708
chr12	87858945	87861345	protein_coding	Esrrb	utr3	ENSMUSG00000021255	ProperStrand	254	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	4	-4.3988
chr9	22176655	22177586	protein_coding	Anln	exon	ENSMUSG00000036777	ProperStrand	133	chr14	57204539	57204555	protein_coding	Parp4	exon	ENSMUSG00000054509	NonProperStrand	113	2	-16.5017
chrX	97830657	97907281	protein_coding	Kif4	intron	ENSMUSG00000034311	ProperStrand	24	chr11	69481382	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-8.1853
chr3	68825261	68826176	protein_coding	Smc4	exon	ENSMUSG00000034349	ProperStrand	21	chr7	106631297	106631377	snoRNA	ENSMUSG00000065822_Snord15a	.	ENSMUSG00000065822	ProperStrand	128	1	-13.9189
chr2	79843543	79843559	protein_coding	Pde1a	intron	ENSMUSG00000059173	NonProperStrand	275	chr3	95980293	95980321	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-3.9103
chr5	122910718	122910770	protein_coding	Atp2a2	exon	ENSMUSG00000029467	ProperStrand	166	chr9	120037901	120037991	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	3	-7.2592
chr17	45571028	45571045	lincRNA	B230354K17Rik	exon	ENSMUSG00000073393	ProperStrand	11	chr1	162965531	162965575	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-6.5834
chr9	34978825	34983360	protein_coding	Dcps	exon	ENSMUSG00000032040	ProperStrand	38	chr11	6428130	6428165	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.0389
chr10	93328185	93331648	protein_coding	Metap2	exon	ENSMUSG00000036112	ProperStrand	78	chr1	162967519	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	3	-7.6555
chr3	37541619	37541656	protein_coding	Spry1	exon	ENSMUSG00000037211	ProperStrand	5	chr4	131908236	131908292	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-6.0411
chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	chr2	27395375	27395426	snRNA	ENSMUSG00000080538_U6atac	.	ENSMUSG00000080538	ProperStrand	8	1	-11.1039
chr13	9833569	9833617	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr9	59186330	59186348	protein_coding	Bbs4	intron	ENSMUSG00000025235	ProperStrand	6	1	-9.6506
chr3	96132424	96132514	snRNA	ENSMUSG00000075978_U1	.	ENSMUSG00000075978	ProperStrand	132	chr14	33005156	33005236	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-2.5685
chr3	133130953	133130977	protein_coding	Tet2	exon	ENSMUSG00000040943	ProperStrand	192	chr1	88247740	88247799	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	2	-5.0583
chr10	67371949	67372048	protein_coding	Zfp365	exon	ENSMUSG00000037855	ProperStrand	9	chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	3	-inf
mmu-miR-5100	5	20	miRNA	mmu-miR-5100	.	mmu-miR-5100	ProperStrand	132	chr13	45015184	45015255	protein_coding	Jarid2	exon	ENSMUSG00000038518	ProperStrand	372	1	-8.0814
chr6	4706040	4706170	protein_coding	Peg10	exon	ENSMUSG00000092035	ProperStrand	102	chr9	15118296	15118321	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	16	-20.1768
chr8	95364337	95364384	protein_coding	Mmp2	exon	ENSMUSG00000031740	ProperStrand	42	chr3	123210854	123210923	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-4.6851
chr14	17075040	17075095	protein_coding	Oxsm	exon	ENSMUSG00000021786	ProperStrand	15	chr3	68889050	68889140	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-5.9293
mmu-miR-6238	1	18	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr19	8800355	8800467	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	4	-5.3818
chr15	96825649	96825686	protein_coding	Slc38a4	utr3	ENSMUSG00000022464	ProperStrand	139	chr8	89368908	89369008	protein_coding	N4bp1	intron	ENSMUSG00000031652	ProperStrand	98	1	-10.6411
chr18	12962807	12962855	protein_coding	Osbpl1a	intron	ENSMUSG00000044252	ProperStrand	39	chr2	130484597	130484613	protein_coding	Ddrgk1	intron	ENSMUSG00000068290	ProperStrand	43	1	-14.8539
chr3	90303348	90303372	protein_coding	2500003M10Rik	utr3	ENSMUSG00000001017	NonProperStrand	2	chr6	71832604	71832685	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	NonProperStrand	5	1	-21.6030
chr4	91012543	91012564	protein_coding	Elavl2	intron	ENSMUSG00000008489	ProperStrand	52	chr1	162966189	162966208	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-7.8620
chr16	20542344	20542788	protein_coding	Ap2m1	exon	ENSMUSG00000022841	ProperStrand	23	chr9	120038607	120038672	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.8435
chr1	184367075	184367127	protein_coding	Trp53bp2	exon	ENSMUSG00000026510	ProperStrand	19	chr9	78328378	78328474	protein_coding	Eef1a1	utr5	ENSMUSG00000037742	ProperStrand	1990	1	-8.6435
chr10	6342811	6342828	protein_coding	Mthfd1l	intron	ENSMUSG00000040675	NonProperStrand	14	chr7	116664809	116664919	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-12.6245
chr18	34787303	34787476	protein_coding	Kif20a	exon	ENSMUSG00000003779	ProperStrand	50	chr9	120039569	120039659	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.6542
chr2	51967664	51967705	protein_coding	Rif1	exon	ENSMUSG00000036202	ProperStrand	201	chr11	62416967	62416985	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-3.7233
chr2	113927219	113927319	protein_coding	Aqr	exon	ENSMUSG00000040383	ProperStrand	70	chr11	6428035	6428092	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.9161
chr16	98173841	98173941	protein_coding	Zfp295	exon	ENSMUSG00000046962	ProperStrand	63	chr16	23111454	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.1926
chr2	158360481	158360498	protein_coding	Arhgap40	exon	ENSMUSG00000074625	ProperStrand	3	chr4	131865855	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.6896
chr8	26927899	26928080	protein_coding	Ash2l	exon	ENSMUSG00000031575	ProperStrand	113	chr11	68886950	68887040	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-2.9799
chr10	30256555	30256617	protein_coding	Trmt11	intron	ENSMUSG00000019792	ProperStrand	3	chr5	124566336	124566353	protein_coding	Arl6ip4	utr5	ENSMUSG00000029404	ProperStrand	29	1	-inf
chr17	13184992	13185015	protein_coding	Wtap	utr5	ENSMUSG00000060475	ProperStrand	119	chr4	56910551	56910618	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	3	-11.3021
chr7	30972512	30972705	protein_coding	Capns1	utr3	ENSMUSG00000001794	ProperStrand	35	chr11	69481352	69481442	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	3	-10.2186
chr10	56107904	56107994	protein_coding	Gja1	exon	ENSMUSG00000050953	ProperStrand	70	chr9	120039587	120039667	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	5	-13.4043
chr8	59991434	59991450	protein_coding	Hmgb2	exon	ENSMUSG00000054717	NonProperStrand	96	chr4	131865855	131865910	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.0955
chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr4	131865852	131865986	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	31	-14.9230
chr17	26360445	26360562	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	chr8	34802315	34802416	snoRNA	ENSMUSG00000088856_SNORA48	.	ENSMUSG00000088856	ProperStrand	236	14	-20.5105
chr12	106028874	106028890	protein_coding	Clmn	intron	ENSMUSG00000021097	ProperStrand	50	chr7	133709680	133709704	protein_coding	Eif3c	utr5	ENSMUSG00000030738	ProperStrand	92	1	-12.8223
chr1	155287307	155287354	snoRNA	ENSMUSG00000064435_SNORA4	.	ENSMUSG00000064435	ProperStrand	263	chr1	89673731	89673784	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	2	-1.8716
chr6	38859418	38859441	protein_coding	Tbxas1	intron	ENSMUSG00000029925	NonProperStrand	5	chr4	56910495	56910567	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-11.2409
chr4	141325881	141326823	protein_coding	Dnajc16	exon	ENSMUSG00000040697	ProperStrand	12	chr5	130300531	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-5.5517
chr4	52494670	52496930	protein_coding	Smc2	exon	ENSMUSG00000028312	ProperStrand	50	chr11	69483195	69483271	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.7653
chr7	51503475	51505909	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	chr2	26493387	26493491	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	5	-3.2128
chr1	22369612	22387540	protein_coding	Rims1	exon	ENSMUSG00000041670	NonProperStrand	13	chr16	23111391	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.8569
chr2	153594032	153594075	protein_coding	Mapre1	utr3	ENSMUSG00000027479	ProperStrand	19	chr14	123223816	123223839	protein_coding	Pcca	intron	ENSMUSG00000041650	ProperStrand	13	1	-18.8140
chr11	3293012	3309057	protein_coding	Limk2	exon	ENSMUSG00000020451	ProperStrand	100	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	2	-12.6224
chr14	31993046	31993065	protein_coding	Nisch	exon	ENSMUSG00000021910	ProperStrand	125	chr8	3568023	3568039	protein_coding	C330021F23Rik	utr5	ENSMUSG00000065952	NonProperStrand	85	1	-11.1390
chr18	38050481	38050504	protein_coding	Diap1	exon	ENSMUSG00000024456	ProperStrand	77	chr5	130295432	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-4.7658
chr5	31364936	31369091	protein_coding	Cad	exon	ENSMUSG00000013629	ProperStrand	260	chr18	35102297	35102336	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-3.7624
chr9	21541728	21542339	protein_coding	Ldlr	exon	ENSMUSG00000032193	ProperStrand	60	chr2	158182180	158182270	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	6	-19.7518
chr10	127496106	127496122	protein_coding	Ptges3	utr5	ENSMUSG00000071072	NonProperStrand	11	chr15	79908934	79908955	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-8.8923
chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	chr1	20922259	20922275	protein_coding	Paqr8	utr5	ENSMUSG00000025931	NonProperStrand	60	1	-9.2091
chr4	15210503	15210528	protein_coding	Tmem64	utr3	ENSMUSG00000043252	ProperStrand	32	chr2	152099897	152101143	protein_coding	Csnk2a1	exon	ENSMUSG00000074698	ProperStrand	91	1	-13.7444
chr7	52714530	52714929	protein_coding	Ftl1	exon	ENSMUSG00000050708	ProperStrand	807	chr14	52829448	52829477	protein_coding	Chd8	intron	ENSMUSG00000053754	ProperStrand	167	1	-6.0880
chr11	96635806	96638294	protein_coding	Snx11	utr5	ENSMUSG00000020876	NonProperStrand	24	chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	1	-12.4739
chr2	155672930	155673020	protein_coding	Uqcc	utr3	ENSMUSG00000005882	ProperStrand	13	chr16	23110913	23110993	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-11.9579
chr9	15119734	15119766	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	NonProperStrand	21	chr11	69481337	69481415	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	NonProperStrand	24	2	-20.3990
chr15	64309167	64309185	LINE	L1MB8	L1	chr15L1MB864308791	NonProperStrand	2	chr17	88039690	88039811	protein_coding	Epcam	exon	ENSMUSG00000045394	ProperStrand	43	1	-inf
chr11	78085685	78101216	protein_coding	2610507B11Rik	exon	ENSMUSG00000010277	ProperStrand	246	chr4	131866155	131866242	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-2.4985
chr2	181324769	181324803	protein_coding	Znf512b	exon	ENSMUSG00000000823	ProperStrand	17	chr9	120038000	120038049	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-7.2046
chr15	82007593	82007610	protein_coding	Srebf2	exon	ENSMUSG00000022463	ProperStrand	592	chr16	90386836	90386853	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	1	-7.6342
chr2	117945164	117945180	protein_coding	Thbs1	exon	ENSMUSG00000040152	ProperStrand	8	chr19	8798740	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	4	-19.4492
chr15	102058029	102062294	protein_coding	Itgb7	utr5	ENSMUSG00000001281	NonProperStrand	9	chr16	33057485	33057517	protein_coding	Rpl35a	exon	ENSMUSG00000060636	ProperStrand	33	1	-17.9352
chr4	42995921	42995952	protein_coding	Vcp	exon	ENSMUSG00000028452	ProperStrand	108	chr11	8870596	8870614	protein_coding	Pkd1l1	intron	ENSMUSG00000046634	NonProperStrand	15	1	-14.9506
chr10	85375601	85375701	protein_coding	Prdm4	exon	ENSMUSG00000035529	ProperStrand	11	chr4	132394292	132394349	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	1	-12.6016
chr11	100573547	100573612	protein_coding	Kat2a	exon	ENSMUSG00000020918	ProperStrand	68	chr1	162965980	162965999	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-3.3732
chr4	131865855	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr11	115275125	115275166	tRNA	tRNA1023-ArgTCG	.	208835	ProperStrand	15	3	-10.4506
chr11	98572091	98572146	protein_coding	Med24	exon	ENSMUSG00000017210	ProperStrand	28	chr4	131908689	131908788	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-4.2923
chr2	91408317	91408407	protein_coding	Ckap5	exon	ENSMUSG00000040549	ProperStrand	53	chr19	8963081	8963161	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.4846
chr6	134398754	134404849	protein_coding	Lrp6	utr3	ENSMUSG00000030201	ProperStrand	42	chr16	23111374	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-5.0758
chr7	52381216	52381309	protein_coding	Rpl13a	utr3	ENSMUSG00000074129	ProperStrand	269	chr4	131865460	131865511	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	8	-14.4571
chr6	31472597	31472639	protein_coding	Podxl	utr3	ENSMUSG00000025608	ProperStrand	37	chr3	108357427	108357500	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-5.4783
chr3	85448965	85456213	protein_coding	Pet112l	exon	ENSMUSG00000028085	ProperStrand	81	chr4	131865855	131865927	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.3246
chr2	101537208	101537298	protein_coding	Traf6	exon	ENSMUSG00000027164	ProperStrand	24	chr16	23111372	23111452	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.7195
chr15	96840389	96840550	protein_coding	Slc38a4	exon	ENSMUSG00000022464	ProperStrand	139	chr1	88247743	88247774	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-3.5071
chr15	72946782	72946814	protein_coding	Eif2c2	exon	ENSMUSG00000036698	ProperStrand	154	chr18	35716776	35716876	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-2.7669
chr7	26595400	26595474	protein_coding	Cyp2s1	intron	ENSMUSG00000040703	ProperStrand	18	chr1	162965979	162966031	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	8	-22.8352
chr9	15119350	15119425	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	chr6	38008000	38008060	snoRNA	ENSMUSG00000088263_snoU13	.	ENSMUSG00000088263	ProperStrand	13	1	-8.1710
chr13	59555121	59555186	protein_coding	Agtpbp1	intron	ENSMUSG00000021557	ProperStrand	35	chr16	23110871	23110961	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.8578
chr11	74867404	74867450	protein_coding	Smg6	exon	ENSMUSG00000038290	ProperStrand	29	chr15	79908974	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	4	-20.9552
chr5	100855947	100855974	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr8	86775579	86777820	protein_coding	Mri1	exon	ENSMUSG00000004996	ProperStrand	9	1	-10.5034
chr16	96224444	96224485	protein_coding	Brwd1	exon	ENSMUSG00000022914	ProperStrand	77	chr2	26493407	26493497	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	11	-inf
chr7	107070577	107070624	protein_coding	Rnf169	utr3	ENSMUSG00000058761	ProperStrand	31	chr11	51551280	51551372	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	1	-9.0262
chr16	17844120	17844165	protein_coding	Dgcr2	exon	ENSMUSG00000003166	ProperStrand	45	chr10	110918549	110918639	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-3.9843
chr9	114299419	114299465	protein_coding	Crtap	exon	ENSMUSG00000032431	ProperStrand	15	chr6	72310104	72310121	protein_coding	Rnf181	utr3	ENSMUSG00000055850	NonProperStrand	7	1	-inf
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr2	53003875	53003891	protein_coding	Prpf40a	exon	ENSMUSG00000061136	ProperStrand	129	1	-7.1899
chr1	132742958	132742975	protein_coding	Pigr	exon	ENSMUSG00000026417	NonProperStrand	48	chr15	85961103	85961120	protein_coding	Gramd4	intron	ENSMUSG00000035900	ProperStrand	39	1	-14.6266
chr13	46862945	46863025	snoRNA	ENSMUSG00000064558_SNORA55	.	ENSMUSG00000064558	ProperStrand	187	chr3	68889026	68889116	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-1.3846
chr4	129662259	129662276	protein_coding	Bai2	utr5	ENSMUSG00000028782	ProperStrand	119	chr12	81492603	81492703	snoRNA	ENSMUSG00000088158_Scarna3b	.	ENSMUSG00000088158	ProperStrand	147	1	-10.1400
chr18	46746279	46746305	protein_coding-noncoding	Tmed7	utr3	ENSMUSG00000033184	ProperStrand	5	chr3	123210854	123210894	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-6.8746
chr17	85482653	85489599	protein_coding	Prepl	utr5	ENSMUSG00000024127	ProperStrand	106	chr12	112071779	112071822	protein_coding	Stk30	intron	ENSMUSG00000056458	ProperStrand	2	1	-inf
chr2	144504965	144504991	protein_coding-noncoding	Dtd1	utr5	ENSMUSG00000027430	ProperStrand	1	chr11	120669286	120669415	protein_coding	Fasn	exon	ENSMUSG00000025153	ProperStrand	298	1	-inf
chr8	3803244	3803334	misc_RNA	RNaseP_nuc	.	ENSMUSG00000088025	NonProperStrand	14	chr16	57391652	57391729	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	1	-13.2708
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr1	63225279	63225322	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	1	-5.9589
chr6	65806012	65806095	protein_coding	Prdm5	exon	ENSMUSG00000029913	ProperStrand	50	chr7	118219575	118219630	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-4.5179
chr9	69972993	69973998	protein_coding	Fam81a	exon	ENSMUSG00000032224	ProperStrand	59	chr1	162965531	162965570	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.3068
chr11	76231152	76231177	protein_coding	Abr	utr3	ENSMUSG00000017631	ProperStrand	33	chr14	33005096	33005139	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-5.1419
chr5	28398292	28400133	protein_coding	Insig1	exon	ENSMUSG00000045294	ProperStrand	35	chr17	24857727	24857807	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.2429
chr2	73680434	73680475	protein_coding	Atf2	exon	ENSMUSG00000027104	ProperStrand	37	chr11	72257056	72257093	protein_coding	Mybbp1a	exon	ENSMUSG00000040463	ProperStrand	279	1	-11.2076
chr11	116713048	116713069	protein_coding-noncoding	Srsf2	utr3	ENSMUSG00000034120	ProperStrand	14	chr18	33954848	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	9	-inf
chr7	115258029	115258047	LINE	L1_Mus2	L1	chr7L1_Mus2115256645	ProperStrand	12	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-10.4710
chr5	136488205	136488285	protein_coding	Dtx2	exon	ENSMUSG00000004947	ProperStrand	10	chr16	23111401	23111491	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.3721
chr10	20080841	20080859	protein_coding	Fam54a	utr3	ENSMUSG00000019992	ProperStrand	232	chr15	79908930	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-2.9339
chr10	3219712	3219728	protein_coding	Cnksr3	exon	ENSMUSG00000015202	ProperStrand	22	chr3	123210904	123210987	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.8504
chr9	38897505	38897595	LINE	L1Md_F2	L1	chr9L1Md_F238893081	NonProperStrand	1	chr7	54443402	54443492	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	1	-inf
chr1	182104396	182104416	protein_coding	Adck3	exon	ENSMUSG00000026489	ProperStrand	17	chr4	131866191	131866292	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	3	-14.2390
chr12	32241954	32241970	protein_coding	Slc26a4	exon	ENSMUSG00000020651	NonProperStrand	4	chr1	20806842	20807448	protein_coding	Mcm3	exon	ENSMUSG00000041859	NonProperStrand	4	1	-inf
chr13	63981587	63981603	protein_coding	0610007P08Rik	intron	ENSMUSG00000021470	ProperStrand	26	chr1	162966813	162966860	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-7.9298
chr11	114530261	114533063	protein_coding	Rpl38	exon	ENSMUSG00000057322	ProperStrand	29	chr11	69483237	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.7582
chr5	30082889	30082919	protein_coding	Dnajb6	intron	ENSMUSG00000029131	ProperStrand	81	chr11	69481333	69481429	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-2.6681
chr6	47753861	47757081	protein_coding	Pdia4	exon	ENSMUSG00000025823	ProperStrand	41	chr16	23110839	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.4411
chr11	97641464	97641581	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	chr1	162965980	162966045	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	6	-2.2870
chr10	127995981	127996121	protein_coding	Pa2g4	exon	ENSMUSG00000025364	ProperStrand	72	chr4	56910496	56910596	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	8	-inf
chr2	90235313	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	108952869	108952886	protein_coding	Eps15	utr5	ENSMUSG00000028552	ProperStrand	15	1	-7.2074
chr19	25484358	25484374	protein_coding	Kank1	exon	ENSMUSG00000032702	ProperStrand	218	chr8	129468746	129468800	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-2.1025
chr14	51463983	51463999	protein_coding	Tep1	exon	ENSMUSG00000006281	NonProperStrand	73	chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-6.0672
chr2	148698658	148700909	protein_coding	Cst3	exon	ENSMUSG00000027447	ProperStrand	13	chr9	62644050	62644138	protein_coding	Fem1b	exon	ENSMUSG00000032244	ProperStrand	111	2	-20.7066
chr11	20208016	20208083	protein_coding	Slc1a4	exon	ENSMUSG00000020142	ProperStrand	8	chr7	148634786	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-12.9853
chr18	10052132	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr2	118611946	118611962	protein_coding	Disp2	exon	ENSMUSG00000040035	NonProperStrand	204	1	-6.3695
chr7	147233668	147233685	protein_coding	Msx3	utr3	ENSMUSG00000025469	NonProperStrand	3	chr7	29136554	29136598	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-8.4253
chr17	32338427	32339135	protein_coding	Brd4	exon	ENSMUSG00000024002	ProperStrand	121	chr9	120037998	120038030	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	2	-5.7780
chr8	74013109	74013125	protein_coding	Gtpbp3	exon	ENSMUSG00000007610	ProperStrand	21	chr17	35089181	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-7.5760
chr11	59661803	59661819	protein_coding	Nt5m	exon	ENSMUSG00000032615	ProperStrand	17	chr7	30810573	30810637	protein_coding	Zfp568	utr3	ENSMUSG00000074221	ProperStrand	110	1	-14.6652
chr14	122870816	122870832	lincRNA	2610035F20Rik	exon	ENSMUSG00000085555	ProperStrand	29	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-12.2336
chr2	103619525	103619615	protein_coding	Caprin1	exon	ENSMUSG00000027184	ProperStrand	145	chr18	33954815	33954895	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-1.9757
chr7	147292258	147294009	protein_coding	Echs1	exon	ENSMUSG00000025465	ProperStrand	10	chr18	23200093	23200109	protein_coding	Nol4	utr5	ENSMUSG00000041923	ProperStrand	17	1	-19.5107
chr9	61762186	61762237	protein_coding	Rplp1	utr5	ENSMUSG00000007892	ProperStrand	116	chr3	68889050	68889150	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-2.1154
chr4	43505656	43505894	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr2	144087332	144087462	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	10	-0.8149
chr17	39979943	39980002	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr16	96067553	96067570	lincRNA	1600002D24Rik	intron	ENSMUSG00000086899	NonProperStrand	5	1	-12.3744
chr11	43234636	43234685	protein_coding	Pttg1	exon	ENSMUSG00000020415	ProperStrand	6	chr16	23110912	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.7876
chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr12	110892840	110892905	snoRNA	ENSMUSG00000064621_AF357355	.	ENSMUSG00000064621	ProperStrand	60	5	-15.1815
chr11	116112158	116112175	protein_coding	Srp68	exon	ENSMUSG00000020780	ProperStrand	42	chr15	79913314	79913343	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.2623
chr17	35291147	35291465	protein_coding	Prrc2a	exon	ENSMUSG00000024393	ProperStrand	315	chr4	131866154	131866234	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-0.9886
chr12	17552949	17553046	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr19	8799054	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	5	-0.9652
chr6	145413903	145413920	protein_coding	Ifltd1	intron	ENSMUSG00000054966	NonProperStrand	4	chr4	131865935	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.0048
chr6	72388907	72388923	protein_coding	Mat2a	intron	ENSMUSG00000053907	ProperStrand	51	chr7	141399351	141399367	protein_coding	Adam12	intron	ENSMUSG00000054555	NonProperStrand	49	1	-14.0552
chr4	131399490	131399506	protein_coding	Mecr	exon	ENSMUSG00000028910	NonProperStrand	109	chr19	8799025	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	3	-11.1011
chr9	55057284	55061717	protein_coding	Fbxo22	exon	ENSMUSG00000032309	ProperStrand	79	chr7	52381973	52382013	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-6.1683
chr18	85126792	85127672	protein_coding	Fbxo15	exon	ENSMUSG00000034391	ProperStrand	23	chr10	110918553	110918643	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	3	-12.4819
chr5	122907345	122907379	protein_coding	Atp2a2	exon	ENSMUSG00000029467	ProperStrand	166	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	3	-8.2426
chr17	35119240	35119258	protein_coding	Lsm2	exon	ENSMUSG00000007050	NonProperStrand	2	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-12.6199
chr11	60969284	60969332	protein_coding	Usp22	exon	ENSMUSG00000042506	ProperStrand	75	chr3	108228259	108228275	protein_coding	Sars	utr3	ENSMUSG00000068739	NonProperStrand	200	1	-10.4497
chr7	52381862	52382080	protein_coding	Rpl13a	exon	ENSMUSG00000074129	ProperStrand	269	chr19	8799866	8799897	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-2.2153
chr3	51144272	51144292	protein_coding	Elf2	intron	ENSMUSG00000037174	NonProperStrand	9	chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	1	-12.4764
chr1	187066799	187066911	snoRNA	ENSMUSG00000077571_Snora36b	.	ENSMUSG00000077571	ProperStrand	244	chr17	35089182	35089207	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-2.8565
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	26768050	26768119	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	5	-4.3678
chr11	78118290	78118350	protein_coding	Spag5	exon	ENSMUSG00000002055	ProperStrand	49	chr3	157729109	157729126	protein_coding	Lrrc40	exon	ENSMUSG00000063052	NonProperStrand	26	2	-21.5700
chr12	82825859	82826720	protein_coding	Map3k9	exon	ENSMUSG00000042724	ProperStrand	92	chr2	32818815	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-4.6435
chr19	28762434	28762450	lincRNA	D930032P07Rik	intron	ENSMUSG00000086457	NonProperStrand	6	chr4	131865855	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-6.1051
chr2	132366081	132366118	protein_coding-noncoding	Gpcpd1	utr3	ENSMUSG00000027346	ProperStrand	1	chr16	23111397	23111497	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-inf
chr14	62980230	62980258	protein_coding	Rnaseh2b	exon	ENSMUSG00000021932	ProperStrand	4	chr18	35716763	35716853	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-7.5042
chr16	23111805	23111833	protein_coding	Eif4a2	intron	ENSMUSG00000022884	ProperStrand	356	chr2	91436228	91436335	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	6	-20.1051
chr16	96264657	96264677	protein_coding	Brwd1	exon	ENSMUSG00000022914	ProperStrand	77	chr8	97377062	97377085	protein_coding	Coq9	exon	ENSMUSG00000031782	ProperStrand	6	1	-17.5452
chr5	28068895	28068985	protein_coding	Paxip1	utr3	ENSMUSG00000002221	ProperStrand	34	chr16	23111383	23111463	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.1231
chr14	24251850	24251866	protein_coding	Kcnma1	intron	ENSMUSG00000063142	NonProperStrand	104	chr18	73693168	73693188	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-4.4617
chr1	158585354	158585428	protein_coding	Tor3a	utr3	ENSMUSG00000060519	ProperStrand	30	chr16	23111442	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	7	-17.0571
chr6	5996788	5996868	protein_coding	Slc25a13	intron	ENSMUSG00000015112	ProperStrand	78	chr8	129468754	129468844	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	3	-9.5657
chr4	46508135	46508157	snoRNA	ENSMUSG00000064410_SNORA36	.	ENSMUSG00000064410	ProperStrand	133	chr4	131865855	131865978	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.7090
chr8	114517509	114517586	protein_coding	Kars	exon	ENSMUSG00000031948	ProperStrand	89	chr3	101392852	101392930	protein_coding	Atp1a1	intron	ENSMUSG00000033161	ProperStrand	316	1	-9.1932
chr8	125603920	125614103	protein_coding	Spg7	exon	ENSMUSG00000000738	ProperStrand	40	chr16	23110458	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-5.4746
chr9	70616666	70616689	protein_coding	Adam10	exon	ENSMUSG00000054693	ProperStrand	12	chr16	23111389	23111497	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.0123
chr17	36005348	36005448	protein_coding	Ppp1r18	exon	ENSMUSG00000034595	ProperStrand	4	chr3	123210854	123210926	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-7.3786
chr8	126004267	126026924	protein_coding	Afg3l1	utr3	ENSMUSG00000031967	ProperStrand	29	chr10	23505151	23505270	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-8.7929
chr15	85411907	85411924	protein_coding	Wnt7b	utr5	ENSMUSG00000022382	ProperStrand	21	chr7	52715126	52715204	protein_coding	Ftl1	utr5	ENSMUSG00000050708	ProperStrand	807	2	-16.1641
chr15	37949199	37949289	protein_coding	Ubr5	exon	ENSMUSG00000037487	ProperStrand	258	chr7	117166747	117166827	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-2.1719
chr16	55904822	55904838	protein_coding	Cep97	utr3	ENSMUSG00000022604	ProperStrand	22	chr7	116663634	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.3535
chrX	71174914	71175014	protein_coding-noncoding	Renbp	utr3	ENSMUSG00000031387	ProperStrand	1	chr7	52381973	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-inf
chr2	73747923	73747953	protein_coding	Atp5g3	exon	ENSMUSG00000018770	ProperStrand	41	chr5	74489595	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	4	-14.3659
chr11	118900007	118900026	protein_coding	Cbx8	exon	ENSMUSG00000025578	ProperStrand	95	chr17	35299513	35299640	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-3.9044
chr12	109448066	109448121	protein_coding	Ccdc85c	intron	ENSMUSG00000084883	ProperStrand	157	chr1	162967513	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-1.8235
chr18	10067627	10067659	protein_coding	Rock1	exon	ENSMUSG00000024290	ProperStrand	21	chr11	6428076	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-12.3099
chr8	110104561	110104890	protein_coding	Psmd7	utr3	ENSMUSG00000039067	ProperStrand	36	chr9	120038552	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	8	-inf
chr6	48368988	48369005	protein_coding	Krba1	utr3	ENSMUSG00000042810	NonProperStrand	2	chr8	73419673	73419725	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-10.3981
chr13	81922248	81922338	lincRNA	Gm17259	intron	ENSMUSG00000091982	NonProperStrand	2	chr3	68889150	68889238	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-10.5388
chr2	118467163	118467263	protein_coding	Bub1b	utr3	ENSMUSG00000040084	ProperStrand	45	chr19	8798743	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-5.3598
chr4	131865381	131865471	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	chr1	59761672	59761714	snoRNA	ENSMUSG00000089093_Snord11	.	ENSMUSG00000089093	ProperStrand	193	14	-inf
chr5	125898856	125898879	protein_coding	Dhx37	exon	ENSMUSG00000029480	ProperStrand	15	chr16	23111772	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-7.4115
chr8	125031834	125031850	protein_coding	Gm20388	intron	ENSMUSG00000092329	ProperStrand	295	chr19	8800377	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-0.9787
chr8	108233712	108233729	protein_coding	4933405L10Rik	exon	ENSMUSG00000013158	ProperStrand	94	chr10	110918549	110918639	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-2.6467
chr14	45919541	45919578	protein_coding	Ero1l	exon	ENSMUSG00000021831	ProperStrand	18	chr16	23110459	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.6884
chr5	136707644	136707662	protein_coding	Sh2b2	exon	ENSMUSG00000005057	NonProperStrand	101	chr9	15118284	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-2.5399
chr10	80641855	80641879	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr2	153335497	153335515	protein_coding	8430427H17Rik	intron	ENSMUSG00000061411	ProperStrand	19	1	-8.4047
chr13	101425190	101425280	protein_coding	Taf9	exon	ENSMUSG00000078941	ProperStrand	15	chr16	23110881	23110961	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-5.9163
chr13	55698422	55698440	protein_coding	Tmed9	utr3	ENSMUSG00000058569	ProperStrand	35	chr8	73419657	73419775	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.1302
chr1	172612010	172612026	protein_coding	Olfml2b	exon	ENSMUSG00000038463	ProperStrand	57	chr9	64022855	64022875	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-8.1280
chr13	9833565	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr15	76619130	76619147	protein_coding	Arhgap39	intron	ENSMUSG00000033697	ProperStrand	29	1	-6.3842
chr17	25378741	25378787	protein_coding	0610007P22Rik	exon	ENSMUSG00000015126	ProperStrand	6	chr11	69481387	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	3	-17.8847
chr9	122589035	122589125	SINE	B4A	B4	chr9B4A122588937	ProperStrand	1	chr11	97674797	97674887	protein_coding	Lasp1	intron	ENSMUSG00000038366	NonProperStrand	11	1	-inf
chr17	4082262	4082338	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr10	66437046	66437063	SINE	B1_Mur3	Alu	chr10B1_Mur366437003	ProperStrand	10	1	-13.6306
chr17	46266429	46266529	protein_coding	Rsph9	intron	ENSMUSG00000023966	NonProperStrand	5	chr16	23110549	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-7.3464
chr2	25077924	25078022	protein_coding	Tubb4b	exon	ENSMUSG00000036752	ProperStrand	58	chr12	112779247	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-4.8413
chr17	32335157	32335329	protein_coding	Brd4	exon	ENSMUSG00000024002	ProperStrand	121	chr1	16092777	16092812	protein_coding	Rpl7	exon	ENSMUSG00000043716	ProperStrand	93	2	-17.1363
chr3	84995363	84995380	protein_coding	Arfip1	intron	ENSMUSG00000074513	NonProperStrand	56	chr11	97643007	97643092	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-4.5544
chr12	110855291	110855310	lincRNA	Rian	intron	ENSMUSG00000091793	NonProperStrand	1	chr8	32260367	32260423	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-inf
chr15	103072727	103072845	protein_coding	Hnrnpa1	exon	ENSMUSG00000046434	ProperStrand	68	chr4	131825994	131826061	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	1	-8.9666
chr17	25860180	25860369	protein_coding	Chtf18	exon	ENSMUSG00000019214	ProperStrand	38	chr14	31827477	31827545	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-7.8571
chr9	48845930	48847110	protein_coding	Usp28	exon	ENSMUSG00000032267	ProperStrand	63	chr4	131865857	131865937	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.6928
chr11	97553709	97553725	protein_coding	Pcgf2	exon	ENSMUSG00000018537	ProperStrand	31	chr6	125057636	125057666	protein_coding	Chd4	exon	ENSMUSG00000063870	ProperStrand	303	1	-11.4013
chr1	95488219	95488292	protein_coding	Farp2	intron	ENSMUSG00000034066	ProperStrand	5	chr9	120038615	120039539	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-8.0049
chr6	125410606	125410622	protein_coding	Cd9	utr3	ENSMUSG00000030342	NonProperStrand	6	chr16	23111383	23111434	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-5.4240
chr5	35041798	35041832	protein_coding	Grk4	utr3	ENSMUSG00000052783	ProperStrand	15	chr13	51743567	51743662	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-9.6615
chr13	23852954	23852978	protein_coding	Hist1h4a	exon	ENSMUSG00000060093	ProperStrand	12	chr19	8963086	8963165	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.2811
chr9	107517201	107526881	protein_coding	Gnai2	intron	ENSMUSG00000032562	ProperStrand	29	chr16	23110965	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-3.5149
chr2	135173806	135173822	antisense	9630028H03Rik	.	ENSMUSG00000085631	ProperStrand	1	chr7	148633884	148633902	protein_coding	Rplp2	exon	ENSMUSG00000025508	ProperStrand	106	1	-inf
chr5	77710455	77713853	protein_coding	Rest	utr3	ENSMUSG00000029249	ProperStrand	136	chr7	117189973	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	4	-7.3904
chr12	104317206	104317223	protein_coding	Unc79	exon	ENSMUSG00000021198	ProperStrand	99	chr14	33005038	33005115	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	2	-5.2935
chr13	90244333	90244413	protein_coding	Tmem167	utr3	ENSMUSG00000012422	ProperStrand	11	chr17	39985206	39985295	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-9.3627
chr7	88186459	88186475	protein_coding	Zfp592	exon	ENSMUSG00000005621	NonProperStrand	32	chr7	52382290	52382309	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-9.5485
chr10	127949009	127949201	protein_coding	Esyt1	exon	ENSMUSG00000025366	ProperStrand	31	chr7	117189991	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-7.6262
chr7	150717294	150717425	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	chr11	77996555	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	25	-19.0696
chr10	61147868	61148303	protein_coding	Sar1a	exon	ENSMUSG00000020088	ProperStrand	15	chr8	13876105	13876195	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	2	-15.7806
chr5	5649853	5657801	protein_coding	A330021E22Rik	exon	ENSMUSG00000040473	ProperStrand	5	chr19	9004433	9005295	protein_coding	Eml3	exon	ENSMUSG00000071647	ProperStrand	19	1	-19.2987
chr14	12832733	12832751	protein_coding	Ptprg	intron	ENSMUSG00000021745	NonProperStrand	8	chr4	56910496	56910618	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	2	-16.2678
chr5	108506293	108506383	protein_coding	Mtf2	intron	ENSMUSG00000029267	ProperStrand	39	chr7	148634704	148634784	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-4.8090
chr17	80249463	80249564	protein_coding	Atl2	utr3	ENSMUSG00000059811	ProperStrand	9	chr19	8799839	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-8.7715
chr19	40160323	40160344	LINE	Lx	L1	chr19Lx40156827	ProperStrand	1	chr15	34370562	34370676	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-inf
chr11	68067261	68067277	protein_coding	Ntn1	intron	ENSMUSG00000020902	NonProperStrand	194	chr11	95242686	95242734	protein_coding	Fam117a	utr3	ENSMUSG00000038893	ProperStrand	18	1	-13.4046
chr5	148113281	148113297	protein_coding	Cdx2	utr3	ENSMUSG00000029646	ProperStrand	276	chr7	134165757	134165821	protein_coding	Maz	utr3	ENSMUSG00000030678	ProperStrand	42	1	-10.9732
chr12	111932282	111932422	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr4	108278918	108278934	protein_coding	Orc1	exon	ENSMUSG00000028587	ProperStrand	161	1	-6.3006
chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	chr12	91558728	91558746	protein_coding	Nrxn3	intron	ENSMUSG00000066392	NonProperStrand	19	1	-14.0208
chr1	187127179	187127265	protein_coding	Iars2	exon	ENSMUSG00000026618	ProperStrand	68	chr1	63225259	63225280	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	3	-19.7315
chr8	13173678	13173854	protein_coding	Lamp1	exon	ENSMUSG00000031447	ProperStrand	92	chr2	20888945	20889025	protein_coding	Arhgap21	exon	ENSMUSG00000036591	ProperStrand	49	1	-12.8651
chr7	146684406	146684425	protein_coding	Inpp5a	intron	ENSMUSG00000025477	ProperStrand	166	chr5	115701190	115701286	protein_coding	Rnf10	exon	ENSMUSG00000041740	ProperStrand	95	1	-10.3481
chr5	119188853	119188891	protein_coding	Med13l	exon	ENSMUSG00000018076	ProperStrand	226	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-4.3427
chr18	75551325	75551367	protein_coding	Smad7	intron	ENSMUSG00000025880	ProperStrand	83	chr4	131908689	131908799	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.8165
chr3	117541760	117541850	protein_coding	Snx7	exon	ENSMUSG00000028007	ProperStrand	5	chr2	26493405	26493485	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-8.7753
chr11	115999916	115999932	protein_coding	Mrpl38	exon	ENSMUSG00000020775	NonProperStrand	65	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-8.7662
chr17	46663594	46663610	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr7	52974685	52974924	protein_coding	Rpl18	exon	ENSMUSG00000059070	ProperStrand	116	1	-7.9128
chr6	113118507	113118525	protein_coding	Lhfpl4	utr3	ENSMUSG00000042873	ProperStrand	47	chr2	32818884	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-5.9501
chr4	43505702	43505723	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr8	27091218	27091234	protein_coding	4930444A02Rik	utr3	ENSMUSG00000037251	NonProperStrand	57	1	-3.1627
chr2	28368857	28368876	protein_coding	Ralgds	utr5	ENSMUSG00000026821	NonProperStrand	60	chr12	60141396	60141508	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	3	-15.5069
chr3	95142612	95142656	protein_coding	Setdb1	exon	ENSMUSG00000015697	ProperStrand	23	chr11	77843160	77843260	protein_coding	Phf12	utr3	ENSMUSG00000037791	ProperStrand	21	1	-17.1449
chr6	124761245	124761262	protein_coding	Tpi1	utr3	ENSMUSG00000023456	NonProperStrand	7	chr2	22444191	22444249	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-12.1931
chr5	36226512	36226528	protein_coding	Ablim2	utr3	ENSMUSG00000029095	ProperStrand	36	chr9	21636326	21637307	protein_coding	Dock6	exon	ENSMUSG00000032198	ProperStrand	155	1	-12.4417
chr3	11580450	11580467	LINE	Lx3A	L1	chr3Lx3A11580299	ProperStrand	53	chr1	88247814	88247864	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-5.3383
chr12	67888584	67888674	protein_coding	Mdga2	intron	ENSMUSG00000034912	ProperStrand	9	chr7	54443897	54443987	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	1	-15.4594
chr4	45942459	45942478	protein_coding	E230008N13Rik	exon	ENSMUSG00000035539	ProperStrand	7	chr5	121655126	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-8.0440
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	1	-6.9905
chr5	144714593	144714611	protein_coding	Rsph10b2	intron	ENSMUSG00000075569	ProperStrand	1	chr9	120038466	120038536	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-inf
chr18	35714256	35714292	lincRNA	Snhg4	intron	ENSMUSG00000090430	ProperStrand	270	chr11	96681522	96681631	protein_coding	Nfe2l1	exon	ENSMUSG00000038615	ProperStrand	118	1	-8.9427
chr11	99076449	99076465	protein_coding	Smarce1	exon	ENSMUSG00000037935	NonProperStrand	8	chr4	131908247	131908296	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-5.0428
chr4	133243477	133243572	protein_coding	Arid1a	exon	ENSMUSG00000007880	ProperStrand	465	chr6	91968701	91968727	protein_coding	Fgd5	intron	ENSMUSG00000034037	ProperStrand	38	1	-10.1333
chr15	102260942	102260983	protein_coding	Sp1	intron	ENSMUSG00000001280	ProperStrand	124	chr7	118219575	118219634	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-2.8407
chr11	83254019	83254035	protein_coding	1700020L24Rik	exon	ENSMUSG00000035085	NonProperStrand	88	chr14	76247736	76247836	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-5.8886
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr9	51893242	51893289	protein_coding	Rdx	exon	ENSMUSG00000032050	ProperStrand	60	2	-10.3167
chrX	148235654	148235744	protein_coding	Huwe1	intron	ENSMUSG00000025261	ProperStrand	501	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-3.1618
chr4	118294131	118294747	protein_coding	Ebna1bp2	exon	ENSMUSG00000028729	ProperStrand	18	chr7	116663675	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.7447
chr11	29593218	29593234	protein_coding	Rtn4	exon	ENSMUSG00000020458	NonProperStrand	5	chr4	131865866	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-6.5022
chr10	68014267	68014286	SINE	B4A	B4	chr10B4A68014200	ProperStrand	1	chr16	23111689	23111753	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-inf
chr13	18903540	18906153	protein_coding	Vps41	exon	ENSMUSG00000041236	ProperStrand	31	chr17	35089183	35089239	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-6.7915
chr14	124243064	124243085	protein_coding	Itgbl1	exon	ENSMUSG00000032925	ProperStrand	159	chr12	110918156	110918221	snoRNA	ENSMUSG00000065749_AF357428	.	ENSMUSG00000065749	ProperStrand	218	1	-8.7737
chr8	93965625	93992236	protein_coding	Fto	exon	ENSMUSG00000055932	ProperStrand	34	chr16	23111453	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.1231
chr11	78313939	78313956	protein_coding	Vtn	exon	ENSMUSG00000017344	ProperStrand	188	chr6	39370154	39370194	protein_coding	Mkrn1	exon	ENSMUSG00000029922	ProperStrand	177	1	-8.8550
chr10	62802344	62802360	protein_coding	Sirt1	intron	ENSMUSG00000020063	NonProperStrand	116	chr16	91638251	91638989	protein_coding	Gart	exon	ENSMUSG00000022962	ProperStrand	200	1	-9.5756
chr19	46805445	46805461	protein_coding	As3mt	intron	ENSMUSG00000003559	ProperStrand	10	chr12	110887828	110887852	snoRNA	ENSMUSG00000084549_SNORD113	.	ENSMUSG00000084549	ProperStrand	196	1	-14.6136
chr7	88186588	88186689	protein_coding	Zfp592	exon	ENSMUSG00000005621	ProperStrand	26	chr18	35716842	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	7	-inf
chr12	119473833	119473867	protein_coding	Sp4	utr3	ENSMUSG00000025323	ProperStrand	6	chr18	35716848	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-6.6008
chr12	111930580	111930878	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr4	137951171	137951189	protein_coding	Fam43b	exon	ENSMUSG00000078235	ProperStrand	12	1	-11.5362
chr1	5187288	5187378	LINE	L1_Mus2	L1	chr1L1_Mus25186216	ProperStrand	1	chr1	5187435	5187525	LTR	RLTRETN_Mm	ERVK	chr1RLTRETN_Mm5187379	ProperStrand	1	1	-inf
chr14	51460950	51460966	protein_coding	Tep1	exon	ENSMUSG00000006281	ProperStrand	37	chr17	35299506	35299545	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-5.7200
chr16	57391758	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chrX	71517821	71517903	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	7	-12.5131
chr11	70050435	70050455	protein_coding	0610010K14Rik	exon	ENSMUSG00000020831	ProperStrand	16	chr9	95524994	95525035	snoRNA	ENSMUSG00000065346_SNORA4	.	ENSMUSG00000065346	ProperStrand	142	1	-14.2765
chr9	95839699	95841308	protein_coding	Atr	exon	ENSMUSG00000032409	ProperStrand	44	chr11	6428087	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.7630
chr15	76734809	76734831	protein_coding	Rpl8	exon	ENSMUSG00000003970	ProperStrand	191	chr2	181316563	181316579	protein_coding	Uckl1	exon	ENSMUSG00000089917	ProperStrand	142	1	-9.2632
chr9	64143804	64143877	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	chr19	12085593	12085609	tRNA	tRNA638-LeuTAA	.	349035	ProperStrand	9	1	-11.6508
chr11	7071166	7071261	protein_coding	Adcy1	utr3	ENSMUSG00000020431	ProperStrand	183	chr7	148195606	148195623	protein_coding	Ifitm3	utr3	ENSMUSG00000025492	NonProperStrand	20	2	-19.3712
chr13	34436854	34436870	protein_coding	Slc22a23	utr5	ENSMUSG00000038267	ProperStrand	95	chr15	34370624	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-2.7234
chrX	71517822	71517961	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	chr7	29136535	29136654	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	20	-2.3424
chr1	135557297	135557365	protein_coding	Zc3h11a	intron	ENSMUSG00000026464	ProperStrand	102	chr5	121593018	121593035	protein_coding	Ptpn11	exon	ENSMUSG00000043733	ProperStrand	25	1	-14.0155
chr13	112540780	112541440	protein_coding	Map3k1	exon	ENSMUSG00000021754	ProperStrand	113	chr8	86623002	86623042	protein_coding	Dcaf15	exon	ENSMUSG00000037103	ProperStrand	32	1	-13.3145
chrX	7182489	7182506	protein_coding	Ccdc22	utr5	ENSMUSG00000031143	NonProperStrand	51	chr6	122290331	122290362	protein_coding	Phc1	utr5	ENSMUSG00000040669	ProperStrand	158	1	-11.6980
chr15	76200668	76200785	protein_coding	Fam203a	exon	ENSMUSG00000022554	ProperStrand	13	chr15	98350145	98350235	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	5	-inf
chr6	73018237	73018255	protein_coding	Dnahc6	intron	ENSMUSG00000052861	ProperStrand	8	chr16	23110828	23110862	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.2180
chr8	109285204	109285223	protein_coding	Tmco7	intron	ENSMUSG00000041949	NonProperStrand	15	chr7	134416064	134416156	protein_coding	Sephs2	exon	ENSMUSG00000049091	ProperStrand	15	2	-inf
chr17	83869170	83869223	protein_coding	Eml4	intron	ENSMUSG00000032624	ProperStrand	50	chr4	131865384	131865460	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	2	-7.2614
chr5	14226340	14226357	protein_coding-noncoding	Sema3e	utr5	ENSMUSG00000063531	NonProperStrand	11	chr12	106269355	106269446	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-7.5084
chr2	120359493	120359515	protein_coding	Zfp106	exon	ENSMUSG00000027288	ProperStrand	199	chr19	8798749	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	2	-4.5444
chr5	99443584	99443601	protein_coding	Prkg2	intron	ENSMUSG00000029334	NonProperStrand	57	chr13	51743567	51743634	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	2	-11.2116
chr8	126343264	126343281	protein_coding	Rab4a	intron	ENSMUSG00000019478	NonProperStrand	15	chr16	23110965	23111000	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.0842
chr9	71945928	71945945	protein_coding	Tcf12	intron	ENSMUSG00000032228	ProperStrand	26	chr18	75161133	75161173	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	1	-10.7104
chr11	30854228	30854282	protein_coding-noncoding	Erlec1	utr3	ENSMUSG00000020311	ProperStrand	1	chr19	8799846	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-inf
chr8	28383820	28383932	protein_coding	Eif4ebp1	exon	ENSMUSG00000031490	ProperStrand	22	chr16	23111789	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-9.1722
chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	chr9	40612873	40612920	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	1	-6.0924
chr11	62130641	62130723	protein_coding	Ncor1	utr3	ENSMUSG00000018501	ProperStrand	132	chr6	115758050	115758125	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-3.9612
chr6	134198649	134198739	protein_coding	Etv6	exon	ENSMUSG00000030199	ProperStrand	46	chr18	33954849	33954929	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-4.0009
chr8	127161409	127161482	protein_coding	2310022B05Rik	utr3	ENSMUSG00000031983	ProperStrand	10	chr18	35714148	35714238	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	3	-16.1730
chr6	3794653	3794670	SINE	B4A	B4	chr6B4A3794525	NonProperStrand	26	chr16	23110928	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.4162
chr13	23831097	23831123	protein_coding	Hist1h1c	exon	ENSMUSG00000036181	ProperStrand	99	chr12	106269284	106269384	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-3.2133
chr17	23956893	23957031	protein_coding	Srrm2	utr3	ENSMUSG00000039218	ProperStrand	521	chr5	73467900	73467917	protein_coding	Fryl	exon	ENSMUSG00000070733	ProperStrand	173	1	-6.8780
chr4	131908356	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	chr6	70805455	70805545	snoRNA	ENSMUSG00000065750_SNORA5	.	ENSMUSG00000065750	ProperStrand	165	13	-14.6770
chr17	45897775	45897791	lincRNA	Gm16862	intron	ENSMUSG00000086615	NonProperStrand	1	chr7	116664794	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-inf
chr4	94745155	94745232	antisense	BC042782	.	ENSMUSG00000087366	ProperStrand	6	chr12	87059483	87059518	rRNA	n-R5s64	.	ENSMUSG00000075973	ProperStrand	3	3	-inf
chr18	77698395	77698485	protein_coding	Rnf165	utr3	ENSMUSG00000025427	ProperStrand	15	chr11	69483199	69483279	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-5.0353
chr13	23677466	23677556	protein_coding	Hist1h2be	exon	ENSMUSG00000047246	ProperStrand	20	chr5	111121119	111121199	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-8.6403
chr14	51690417	51690433	protein_coding	Olfr750	exon	ENSMUSG00000035932	NonProperStrand	16	chr10	110918592	110918620	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-6.0058
chr7	150422771	150422787	protein_coding	Kcnq1	intron	ENSMUSG00000009545	ProperStrand	59	chr1	132709788	132709804	protein_coding	Fcamr	exon	ENSMUSG00000026415	ProperStrand	8	1	-17.3582
chr15	77594843	77596130	protein_coding	Myh9	exon	ENSMUSG00000022443	NonProperStrand	6	chr1	162966185	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	NonProperStrand	4	2	-19.3245
chr3	116375361	116375378	protein_coding	Slc35a3	utr3	ENSMUSG00000027957	NonProperStrand	1	chr4	116827616	116828179	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	1	-inf
chrX	149828130	149828146	protein_coding	Klf8	utr3	ENSMUSG00000041649	NonProperStrand	107	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.9096
chr2	26494700	26494759	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr3	96364590	96364662	protein_coding	Txnip	utr3	ENSMUSG00000038393	ProperStrand	172	1	-4.1583
chr9	107537521	107537578	protein_coding	Gnai2	utr5	ENSMUSG00000032562	ProperStrand	29	chr2	25078241	25078341	protein_coding	Tubb4b	exon	ENSMUSG00000036752	ProperStrand	58	1	-14.8644
chr4	67021499	67021589	LINE	L1Md_A	L1	chr4L1Md_A67020022	ProperStrand	1	chr4	67021647	67021737	LINE	L1Md_A	L1	chr4L1Md_A67021622	ProperStrand	1	1	-inf
chr13	23830777	23830906	protein_coding	Hist1h1c	exon	ENSMUSG00000036181	ProperStrand	99	chr3	35754969	35754989	protein_coding	Atp11b	utr3	ENSMUSG00000037400	ProperStrand	39	1	-13.1758
chr9	64024930	64024963	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	chr2	32818836	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	6	-11.0939
chr11	86532802	86532994	protein_coding	Cltc	exon	ENSMUSG00000047126	ProperStrand	319	chr2	130103454	130103502	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-4.7808
mmu-miR-6238	1	19	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr11	105193292	105193309	protein_coding	Mrc2	exon	ENSMUSG00000020695	ProperStrand	12	1	-13.8207
chr10	107770087	107770123	protein_coding	Pawr	exon	ENSMUSG00000035873	ProperStrand	39	chr5	121655016	121655129	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	6	-20.0161
chr4	131866154	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	chr11	77995188	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	10	-1.2880
chr1	96413602	96413692	LINE	L1Md_F	L1	chr1L1Md_F96411803	ProperStrand	1	chrX	94769525	94769605	LINE	Lx2B	L1	chrXLx2B94768258	ProperStrand	1	1	-inf
chr4	118809713	118809763	antisense	Gm12868	.	ENSMUSG00000085505	ProperStrand	1	chr16	57391639	57391677	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	1	-inf
chr15	75726284	75726700	protein_coding	Eef1d	exon	ENSMUSG00000055762	ProperStrand	99	chr14	76372288	76372353	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	1	-7.9894
chr7	31251474	31251550	protein_coding	Nphs1	intron	ENSMUSG00000006649	ProperStrand	22	chr10	110918639	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-5.3693
chr11	118270121	118270156	protein_coding	Cant1	exon	ENSMUSG00000025575	ProperStrand	22	chr8	32260352	32260384	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-6.6044
chr15	78905713	78906232	protein_coding	Eif3l	exon	ENSMUSG00000033047	ProperStrand	81	chr4	32818219	32818236	protein_coding	Mdn1	exon	ENSMUSG00000058006	NonProperStrand	16	1	-15.3932
chr10	79256537	79256554	protein_coding	Palm	intron	ENSMUSG00000035863	ProperStrand	58	chr15	85889272	85889291	protein_coding	Gramd4	utr5	ENSMUSG00000035900	ProperStrand	39	1	-14.2470
chr11	62590591	62590630	snoRNA	ENSMUSG00000064692_SNORA67	.	ENSMUSG00000064692	ProperStrand	185	chr9	40612851	40612905	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	2	-11.7003
chr4	135531648	135531738	protein_coding	1110049F12Rik	utr3	ENSMUSG00000028669	ProperStrand	2	chr8	13876097	13876177	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-14.6016
chr7	86279141	86279180	protein_coding	Mfge8	utr3	ENSMUSG00000030605	ProperStrand	73	chr14	76247782	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-3.8035
chr5	114870297	114870336	protein_coding	Ube3b	utr3	ENSMUSG00000029577	ProperStrand	26	chr3	141167322	141167338	protein_coding	Unc5c	intron	ENSMUSG00000059921	NonProperStrand	19	1	-17.3157
chr15	101905825	101905844	protein_coding	Eif4b	intron	ENSMUSG00000058655	NonProperStrand	6	chr15	101927105	101927245	protein_coding	Eif4b	utr3	ENSMUSG00000058655	ProperStrand	484	1	-13.8898
chr16	5256015	5256031	protein_coding	Fam86	utr5	ENSMUSG00000022544	ProperStrand	231	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	2	-10.1193
chr4	117558847	117559221	protein_coding	Atp6v0b	intron	ENSMUSG00000033379	ProperStrand	13	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-6.4970
chr6	88435849	88435865	protein_coding	Ruvbl1	exon	ENSMUSG00000030079	NonProperStrand	54	chr17	27559700	27559717	protein_coding	Grm4	utr3	ENSMUSG00000063239	ProperStrand	147	1	-11.7273
chr8	69547374	69547453	LINE	Lx6	L1	chr8Lx669547192	ProperStrand	1	chr7	118219574	118219609	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-inf
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr7	116663634	116663770	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	9	-4.4950
chr11	87864527	87864543	protein_coding	Srsf1	utr3	ENSMUSG00000018379	ProperStrand	49	chr6	72311168	72311215	protein_coding	Rnf181	exon	ENSMUSG00000055850	ProperStrand	12	1	-17.1341
chr5	52545285	52545307	protein_coding	Dhx15	exon	ENSMUSG00000029169	ProperStrand	53	chr4	120430266	120430312	protein_coding	Nfyc	utr3	ENSMUSG00000032897	ProperStrand	4	1	-19.5516
chr4	155260931	155261031	protein_coding	Cpsf3l	exon	ENSMUSG00000029034	ProperStrand	15	chr19	8800114	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-10.4167
chr1	191114716	191114734	protein_coding	Kcnk2	intron	ENSMUSG00000037624	ProperStrand	56	chrX	34622948	34623023	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-3.2962
chr2	32781399	32781415	protein_coding	Lrsam1	utr3	ENSMUSG00000026792	ProperStrand	80	chr4	131908357	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.0291
chr9	21536236	21536303	protein_coding	Ldlr	exon	ENSMUSG00000032193	ProperStrand	60	chr10	39978350	39978440	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-5.4595
chr6	51412343	51412422	protein_coding	Hnrnpa2b1	utr3	ENSMUSG00000004980	ProperStrand	166	chr9	64143745	64143835	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-5.7609
chr7	51568096	51568112	protein_coding	Shank1	exon	ENSMUSG00000038738	ProperStrand	6	chr14	35058537	35062116	protein_coding	Fam35a	exon	ENSMUSG00000041471	ProperStrand	11	2	-18.8749
chrX	93362064	93362120	protein_coding	Msn	utr3	ENSMUSG00000031207	ProperStrand	71	chr4	131865885	131865975	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.5136
chr1	91731081	91731129	protein_coding	Agap1	exon	ENSMUSG00000055013	ProperStrand	229	chr11	6428089	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.0630
chr9	63496419	63496500	protein_coding	Smad3	utr3	ENSMUSG00000032402	ProperStrand	12	chr3	123210854	123210889	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-8.4108
chr11	61303843	61303866	protein_coding	Mapk7	exon	ENSMUSG00000001034	ProperStrand	10	chr17	47075606	47075622	protein_coding	Ubr2	exon	ENSMUSG00000023977	ProperStrand	172	1	-14.8642
chr6	91698421	91699777	protein_coding	Slc6a6	exon	ENSMUSG00000030096	ProperStrand	206	chr11	98289489	98289505	protein_coding	Erbb2	exon	ENSMUSG00000062312	NonProperStrand	6	1	-15.6009
chr2	180922423	180922550	protein_coding	Ppdpf	exon	ENSMUSG00000016344	ProperStrand	7	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-11.3913
chr18	80403700	80403716	protein_coding	Txnl4a	utr5	ENSMUSG00000057130	ProperStrand	44	chr1	162966813	162966867	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-6.8741
chr2	38280204	38280223	lincRNA	Gm13589	intron	ENSMUSG00000085950	NonProperStrand	31	chr11	95824697	95824779	protein_coding	Igf2bp1	utr3	ENSMUSG00000013415	ProperStrand	140	3	-19.2866
chr11	79845586	79845676	protein_coding	Suz12	exon	ENSMUSG00000017548	ProperStrand	53	chr5	74489595	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-4.0106
chr15	79360452	79369118	protein_coding	Ddx17	exon	ENSMUSG00000055065	ProperStrand	140	chr16	23111377	23111457	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-2.2885
chr1	89105750	89105766	protein_coding	Chrng	exon	ENSMUSG00000026253	NonProperStrand	130	chr4	140121137	140121153	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	1	-10.1185
chr7	80599215	80599275	protein_coding	Chd2	exon	ENSMUSG00000078671	ProperStrand	69	chr10	110918555	110918645	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-3.1941
chr4	122968584	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	chr19	17900101	17900117	snoRNA	ENSMUSG00000089540_snoU13	.	ENSMUSG00000089540	ProperStrand	99	1	-5.2997
chr19	36514536	36514626	protein_coding	Pcgf5	exon	ENSMUSG00000024805	ProperStrand	6	chr10	110918547	110918628	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-8.0545
chr18	89387605	89387621	protein_coding	Cd226	intron	ENSMUSG00000034028	ProperStrand	47	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-6.3497
chr11	97546405	97546421	protein_coding	Mllt6	utr3	ENSMUSG00000038437	ProperStrand	110	chr5	125884617	125884657	tRNA	tRNA1317-AlaTGC	.	1903544	ProperStrand	149	1	-10.2705
chr9	122170515	122170532	protein_coding	Ano10	exon	ENSMUSG00000037949	ProperStrand	16	chr17	35299507	35299642	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-7.4021
chr7	38468013	38468033	protein_coding	Zfp536	intron	ENSMUSG00000043456	ProperStrand	57	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	2	-11.3963
chr14	22612990	22613090	protein_coding	Samd8	utr3	ENSMUSG00000021770	ProperStrand	25	chr19	8799068	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-7.5768
chr18	78019751	78019822	protein_coding	Atp5a1	exon	ENSMUSG00000025428	ProperStrand	254	chr1	71341492	71341509	protein_coding	Abca12	exon	ENSMUSG00000050296	NonProperStrand	143	2	-13.7786
chr10	94780463	94780479	protein_coding	Cradd	intron	ENSMUSG00000045867	NonProperStrand	5	chr4	131865856	131865978	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-6.5022
chrX	39606917	39606934	protein_coding	Stag2	exon	ENSMUSG00000025862	NonProperStrand	1	chr3	123210913	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-inf
chr7	7156298	7156327	protein_coding	Zfp772	exon	ENSMUSG00000066838	ProperStrand	3	chr2	32818872	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-11.7908
chr9	23211250	23211267	protein_coding	Bmper	exon	ENSMUSG00000031963	ProperStrand	16	chr2	26493366	26493465	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-6.3192
chr19	46137889	46137962	protein_coding	Pprc1	exon	ENSMUSG00000055491	ProperStrand	143	chr7	118219575	118219611	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-2.5928
chr2	129998666	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr13	112540780	112541440	protein_coding	Map3k1	exon	ENSMUSG00000021754	ProperStrand	113	1	-6.8500
chr2	9985901	9985917	protein_coding	Atp5c1	exon	ENSMUSG00000025781	ProperStrand	138	chr12	17552963	17553033	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-3.5130
chr9	41841725	41843619	protein_coding	Sorl1	exon	ENSMUSG00000049313	ProperStrand	112	chr10	80641725	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	1	-6.3111
chr5	42136455	42136473	Low_complexity	GA-rich	Low_complexity	chr5GA-rich42136449	NonProperStrand	106	chr18	35714186	35714257	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	3	-6.4460
chr5	98614334	98614352	pseudogene	A730035I17Rik	.	ENSMUSG00000045238	ProperStrand	17	chr18	35716755	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-7.5039
chr1	72881931	72882034	protein_coding	Igfbp2	intron	ENSMUSG00000039323	ProperStrand	406	chr2	26768382	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-2.0960
chr8	126343264	126343281	protein_coding	Rab4a	intron	ENSMUSG00000019478	NonProperStrand	15	chr7	52382753	52382832	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-9.5520
chr5	108334268	108336495	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	chr3	123210851	123210989	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	113	-inf
chr11	116535929	116535982	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr8	46334013	46334106	protein_coding	F11	exon	ENSMUSG00000031645	ProperStrand	21	1	-8.0095
chr2	29032449	29033068	protein_coding	Setx	exon	ENSMUSG00000043535	ProperStrand	187	chr5	108336399	108336489	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	4	-9.7050
chr8	18882859	18882877	protein_coding	Agpat5	utr3	ENSMUSG00000031467	NonProperStrand	16	chr11	106362638	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-10.0783
chr2	127647514	127647689	protein_coding	Bub1	exon	ENSMUSG00000027379	ProperStrand	26	chr11	68886934	68887014	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-5.7674
chr15	76178367	76178538	protein_coding	Sharpin	exon	ENSMUSG00000022552	ProperStrand	5	chr4	40754825	40756746	protein_coding	B4galt1	exon	ENSMUSG00000028413	ProperStrand	25	1	-18.7681
chr3	84672937	84673017	protein_coding	Fbxw7	intron	ENSMUSG00000028086	ProperStrand	11	chr3	84473558	84473648	protein_coding	Arfip1	intron	ENSMUSG00000074513	ProperStrand	49	1	-17.2779
chr9	21815460	21815550	protein_coding	Prkcsh	intron	ENSMUSG00000003402	ProperStrand	58	chr5	108334195	108334267	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	2	-8.0743
chr7	54106402	54109367	protein_coding	Ldha	exon	ENSMUSG00000063229	ProperStrand	280	chr10	80641721	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	14	-20.6484
chr7	140955174	140955198	protein_coding	Dhx32	intron	ENSMUSG00000030986	ProperStrand	100	chr8	26878572	26878628	protein_coding	Bag4	exon	ENSMUSG00000037316	ProperStrand	10	1	-15.9368
chr12	56403834	56403850	protein_coding	1110008L16Rik	utr5	ENSMUSG00000021023	ProperStrand	20	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.6810
chr14	27199812	27199828	antisense	4933413J09Rik	.	ENSMUSG00000021874	ProperStrand	51	chr7	116663711	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-4.8746
chr16	18283302	18283319	protein_coding	Dgcr8	exon	ENSMUSG00000022718	ProperStrand	67	chr10	80247888	80247930	protein_coding	Dot1l	exon	ENSMUSG00000061589	ProperStrand	48	1	-13.5407
chr15	36538089	36538132	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr3	89009743	89009759	protein_coding	Gba	exon	ENSMUSG00000028048	NonProperStrand	88	1	-7.1200
chr14	33060966	33061002	protein_coding	Parg	intron	ENSMUSG00000021911	ProperStrand	33	chr6	48017352	48032245	protein_coding	Zfp746	exon	ENSMUSG00000057691	ProperStrand	23	11	-19.0288
chr18	35714261	35714292	lincRNA	Snhg4	intron	ENSMUSG00000090430	ProperStrand	270	chr9	15119287	15119378	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	5	-11.0203
chr4	95681565	95683661	protein_coding	Hook1	exon	ENSMUSG00000028572	ProperStrand	49	chr10	23505151	23505231	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.5211
chr11	102919555	102919580	protein_coding	Nmt1	exon	ENSMUSG00000020936	ProperStrand	43	chr9	15119704	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-8.1634
chr11	105001844	105001860	SINE	B1_Mm	Alu	chr11B1_Mm105001833	ProperStrand	2	chr8	73419675	73419776	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	NonProperStrand	53	1	-inf
chr2	156288148	156288232	protein_coding	Epb4.1l1	intron	ENSMUSG00000027624	ProperStrand	27	chr5	122915991	122916080	protein_coding	Atp2a2	exon	ENSMUSG00000029467	ProperStrand	166	1	-12.8867
chr7	34998454	34998515	protein_coding	Gpi1	intron	ENSMUSG00000036427	ProperStrand	288	chr17	35089181	35089233	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-2.5690
chr3	19033529	19033613	protein_coding	Armc1	utr3	ENSMUSG00000027599	ProperStrand	2	chr4	131908256	131908301	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-8.3123
chr15	76163393	76163483	protein_coding	Gpaa1	exon	ENSMUSG00000022561	ProperStrand	2	chr9	15119646	15119726	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-9.8289
chr5	136212686	136212857	protein_coding	Tmem120a	exon	ENSMUSG00000039886	ProperStrand	2	chr16	23110852	23110892	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr11	115104844	115104861	protein_coding	Tmem104	exon	ENSMUSG00000045980	NonProperStrand	21	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.5891
chr11	50111717	50112654	protein_coding	Canx	exon	ENSMUSG00000020368	ProperStrand	296	chr3	88497852	88497942	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-4.3444
chr6	24580446	24580536	protein_coding	Wasl	intron	ENSMUSG00000029684	ProperStrand	25	chr11	69481393	69481473	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-4.8537
chr10	5987300	5987400	protein_coding	Akap12	utr3	ENSMUSG00000038587	ProperStrand	1008	chr19	8799047	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-0.9568
chr1	180262352	180267915	protein_coding	Hnrnpu	exon	ENSMUSG00000039630	ProperStrand	286	chr18	33954817	33954952	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	7	-9.8099
chr14	79525712	79525729	protein_coding	1300010F03Rik	intron	ENSMUSG00000058997	NonProperStrand	10	chr17	5342361	5342415	protein_coding	Arid1b	exon	ENSMUSG00000069729	ProperStrand	28	2	-19.4305
chr14	21514198	21514250	lincRNA	6230400D17Rik	intron	ENSMUSG00000086351	ProperStrand	6	chr17	86567781	86567798	protein_coding	Prkce	utr5	ENSMUSG00000045038	ProperStrand	19	1	-19.0985
chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	chr4	131908250	131908437	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-0.7203
chr4	53873604	53873647	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	chr18	35716696	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	5	-1.0140
chr8	41569583	41569600	protein_coding	Zdhhc2	utr3	ENSMUSG00000039470	NonProperStrand	85	chr4	131908265	131908355	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.9537
chr2	167387803	167387883	processed_transcript	Gm11476	.	ENSMUSG00000085596	NonProperStrand	1	chr2	167252734	167252826	protein_coding	Slc9a8	intron	ENSMUSG00000039463	NonProperStrand	4	1	-inf
chr9	45198614	45198694	protein_coding	Fxyd6	intron	ENSMUSG00000066705	ProperStrand	30	chr11	6428077	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.4908
chrX	162877985	162878001	protein_coding	Ofd1	exon	ENSMUSG00000040586	ProperStrand	8	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.4974
chr10	58684406	58684423	protein_coding	Sept10	utr5	ENSMUSG00000019917	NonProperStrand	9	chr3	123210863	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.6210
chr13	6578726	6578906	protein_coding	Pitrm1	exon	ENSMUSG00000021193	ProperStrand	28	chr2	32608084	32608101	protein_coding	Sh2d3c	intron	ENSMUSG00000059013	NonProperStrand	8	1	-18.2452
chr8	109707699	109707744	protein_coding	Cyb5b	utr3	ENSMUSG00000031924	ProperStrand	39	chr19	8798504	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-6.0570
chr1	193719477	193719494	protein_coding-noncoding	1700034H15Rik	utr3	ENSMUSG00000055833	NonProperStrand	2	chr16	23110890	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr7	38585790	38585807	LINE	L1MC	L1	chr7L1MC38585450	NonProperStrand	2	chr16	23110841	23110883	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr12	80356309	80356326	protein_coding	Zfyve26	exon	ENSMUSG00000066440	ProperStrand	44	chr16	23111690	23111752	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.4139
chr13	36960348	36960365	protein_coding	F13a1	utr3	ENSMUSG00000039109	NonProperStrand	15	chr11	101466279	101466350	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	3	-inf
chr5	116071701	116071718	protein_coding	Gcn1l1	exon	ENSMUSG00000041638	ProperStrand	408	chr12	92811969	92812014	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	1	-4.7988
chr4	47062054	47062136	protein_coding	Anks6	exon	ENSMUSG00000066191	ProperStrand	3	chr16	23110966	23111010	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr1	78459519	78459848	protein_coding	Farsb	exon	ENSMUSG00000026245	ProperStrand	40	chr5	130300474	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.2271
chr17	23945365	23959626	protein_coding	Srrm2	utr5	ENSMUSG00000039218	ProperStrand	521	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	4	-2.6044
chr1	45862187	45879733	protein_coding	Wdr75	exon	ENSMUSG00000025995	ProperStrand	24	chr15	79908929	79908995	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	4	-20.6862
chr17	45705899	45705924	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-1.9529
chr17	33822308	33822326	protein_coding	Hnrnpm	utr5	ENSMUSG00000059208	ProperStrand	56	chr2	26493383	26493406	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-3.8714
chr4	96250720	96250737	protein_coding	Cyp2j9	exon	ENSMUSG00000015224	ProperStrand	10	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-6.7807
chr14	20962401	20962501	protein_coding	Kcnk5	intron	ENSMUSG00000023243	ProperStrand	29	chr17	24857380	24857544	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	3	-inf
chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	chr2	166890839	166890858	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	1	-5.9292
chr3	5897452	5897468	LINE	L1Md_F2	L1	chr3L1Md_F25897398	ProperStrand	1	chr7	134671387	134671463	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-inf
chr9	114423170	114424868	protein_coding	Trim71	exon	ENSMUSG00000079259	ProperStrand	162	chr18	33954918	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-1.8012
chr6	34254214	34254304	protein_coding	Akr1b3	utr3	ENSMUSG00000001642	ProperStrand	71	chr10	110918558	110918638	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-3.1426
chr11	116619032	116619057	antisense	BC018473	.	ENSMUSG00000056032	ProperStrand	48	chr4	131908360	131908467	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	1	-7.7048
chr4	155366536	155366553	protein_coding	B3galt6	exon	ENSMUSG00000050796	ProperStrand	40	chr9	120039585	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-6.8502
chr2	29760730	29760784	protein_coding	Odf2	intron	ENSMUSG00000026790	ProperStrand	58	chr17	35089181	35089233	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	2	-9.0830
chr14	52525919	52526188	protein_coding	Ndrg2	exon	ENSMUSG00000004558	ProperStrand	10	chr15	98350180	98350270	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-8.3564
chr5	111082719	111082737	protein_coding	Ddx51	exon	ENSMUSG00000029504	ProperStrand	54	chrX	96245892	96245908	protein_coding	Stard8	intron	ENSMUSG00000031216	ProperStrand	142	1	-11.7964
chr10	90581031	90581270	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	chr18	35714172	35714291	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	23	-1.4576
chr9	72584489	72584579	protein_coding	Nedd4	exon	ENSMUSG00000032216	ProperStrand	308	chr4	147651442	147651495	protein_coding	Ptchd2	intron	ENSMUSG00000041544	ProperStrand	10	8	-19.5544
chr12	111870910	111897436	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr2	26493366	26493485	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	5	-3.0879
chr3	130431729	130432028	protein_coding	Rpl34	exon	ENSMUSG00000062006	ProperStrand	51	chr4	131908236	131908352	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-3.0808
chr8	23588876	23588924	protein_coding	Slc20a2	intron	ENSMUSG00000037656	ProperStrand	63	chr8	125424535	125424552	protein_coding	Gm20388	intron	ENSMUSG00000092329	ProperStrand	295	1	-10.0233
chr3	132761505	132761521	protein_coding	Ints12	exon	ENSMUSG00000028016	ProperStrand	4	chr4	131865856	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-inf
chrX	140317282	140317318	protein_coding	Dcx	intron	ENSMUSG00000031285	ProperStrand	1	chr2	26494708	26494808	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-inf
chrX	98877853	98877914	protein_coding	Ogt	utr3	ENSMUSG00000034160	ProperStrand	49	chr4	131908689	131908751	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.5109
chr8	125423628	125423899	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	chr15	79913288	79913347	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-0.7252
chr8	64017614	64028377	protein_coding	Palld	exon	ENSMUSG00000058056	NonProperStrand	125	chr2	91436229	91436336	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	8	-inf
chr11	88861031	88870617	protein_coding	Trim25	exon	ENSMUSG00000000275	ProperStrand	50	chr16	23110904	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-1.9047
chr11	106015358	106015394	protein_coding	Map3k3	utr3	ENSMUSG00000020700	ProperStrand	36	chr4	134696749	134696770	protein_coding	Runx3	intron	ENSMUSG00000070691	NonProperStrand	3	1	-inf
chr16	30514154	30514171	protein_coding	Tmem44	utr3	ENSMUSG00000022537	ProperStrand	217	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	2	-8.5459
chr8	73920835	73920917	protein_coding	5430437P03Rik	utr5	ENSMUSG00000031820	ProperStrand	11	chr18	33954917	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-11.1395
chr2	90235313	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr13	13917634	13917650	protein_coding	Gng4	utr3	ENSMUSG00000021303	NonProperStrand	7	1	-8.8025
chrX	91620484	91620576	protein_coding	Apoo	intron	ENSMUSG00000079508	ProperStrand	1	chr9	64022900	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-inf
chr3	103157698	103157788	protein_coding	Trim33	exon	ENSMUSG00000033014	ProperStrand	55	chr16	23111385	23111465	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.3807
chrX	72625195	72625214	protein_coding	F8	utr5	ENSMUSG00000031196	NonProperStrand	3	chr4	131866155	131866257	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-9.8903
chr11	114951485	114951565	LINE	L1MCb	L1	chr11L1MCb114951499	NonProperStrand	1	chr11	114951310	114951400	SINE	B3A	B2	chr11B3A114951281	ProperStrand	1	1	-inf
chr10	80644029	80644083	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr7	109830472	109830488	protein_coding	Trim68	intron	ENSMUSG00000073968	ProperStrand	23	1	-8.0160
chr9	40106249	40106284	protein_coding	Gramd1b	intron	ENSMUSG00000040111	ProperStrand	40	chr12	106269284	106269384	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-4.9177
chr8	28983459	28983539	LTR	MLT2D	ERVL	chr8MLT2D28983398	ProperStrand	1	chr8	28983316	28983406	Simple_repeat	(CAGAGA)n	Simple_repeat	chr8(CAGAGA)n28983310	NonProperStrand	1	1	-inf
chr5	31754858	31754921	protein_coding	Zfp512	utr5	ENSMUSG00000062761	ProperStrand	44	chr18	73693122	73693146	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	3	-14.1204
chr9	78326456	78326556	protein_coding	Eef1a1	utr3	ENSMUSG00000037742	ProperStrand	1990	chr9	15118563	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	1	-2.6036
chr1	173783289	173783305	protein_coding	Cd84	utr3	ENSMUSG00000038147	ProperStrand	1	chr12	112779147	112779262	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	NonProperStrand	10	1	-inf
chr7	30807604	30807704	protein_coding	Zfp568	exon	ENSMUSG00000074221	ProperStrand	110	chr19	8799869	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-3.7954
chr1	145506238	145506255	protein_coding	Cdc73	intron	ENSMUSG00000026361	NonProperStrand	26	chr10	126462114	126462214	protein_coding	Tsfm	intron	ENSMUSG00000040521	ProperStrand	7	1	-22.6056
chr17	95214904	95214967	LTR	ORR1A4	MaLR	chr17ORR1A495214676	ProperStrand	2	chr7	117166784	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-12.2088
chr13	21272372	21272388	protein_coding	Trim27	exon	ENSMUSG00000021326	ProperStrand	28	chr7	116663649	116663770	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.8921
chr19	19886655	19886673	LINE	L1_Rod	L1	chr19L1_Rod19885913	ProperStrand	1	chr17	24857767	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-inf
chr11	119327257	119327357	protein_coding	Rnf213	exon	ENSMUSG00000070327	ProperStrand	20	chr19	8799587	8799642	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	2	-14.2931
chr15	76734986	76736713	protein_coding	Rpl8	utr3	ENSMUSG00000003970	ProperStrand	191	chr4	131908236	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-1.7029
chr5	33369238	33369280	protein_coding	Ywhah	exon	ENSMUSG00000018965	ProperStrand	81	chr10	110918549	110918639	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-2.9073
chr11	116535501	116535534	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr15	97897281	97906245	protein_coding	Senp1	exon	ENSMUSG00000033075	ProperStrand	24	1	-7.7387
chr11	118122859	118123307	protein_coding	Usp36	utr3	ENSMUSG00000033909	ProperStrand	27	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	2	-13.0894
chr14	61113419	61113436	LINE	L1MB3	L1	chr14L1MB361113375	NonProperStrand	72	chr19	8798740	8798769	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-4.4514
chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	chr19	8963087	8963181	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-0.7674
chr4	33276470	33276541	protein_coding	Pm20d2	utr5	ENSMUSG00000054659	ProperStrand	19	chr16	23110515	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-7.6701
chr2	6828367	6828386	protein_coding	Celf2	intron	ENSMUSG00000002107	NonProperStrand	26	chr9	120040185	120040236	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	1	-11.2138
chr7	120019728	120019745	protein_coding	Tead1	exon	ENSMUSG00000055320	NonProperStrand	41	chr1	162966190	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-8.3386
chr6	92104375	92104391	protein_coding	Nr2c2	exon	ENSMUSG00000005893	ProperStrand	101	chr1	162968441	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-5.0622
chr14	70986726	70986743	protein_coding	Fam160b2	exon	ENSMUSG00000022095	ProperStrand	24	chr10	75502831	75502880	protein_coding	Zfp280b	utr3	ENSMUSG00000049764	ProperStrand	25	1	-16.8481
chr1	89105750	89105766	protein_coding	Chrng	exon	ENSMUSG00000026253	NonProperStrand	130	chr4	153654395	153654958	protein_coding	Arhgef16	exon	ENSMUSG00000029032	ProperStrand	12	1	-15.0318
chr10	92447516	92447534	protein_coding	Gm872	intron	ENSMUSG00000020014	ProperStrand	14	chr4	131908240	131908297	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.9265
chr11	98603025	98603043	protein_coding	Thra	intron	ENSMUSG00000058756	ProperStrand	63	chr3	68889086	68889120	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-3.1685
chr13	99080019	99080052	protein_coding	Btf3	utr3	ENSMUSG00000021660	ProperStrand	64	chr16	38158127	38158227	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	1	-8.5209
chr6	139990782	139990798	protein_coding	Capza3	exon	ENSMUSG00000041791	ProperStrand	1	chr15	98350209	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-inf
chr7	93027537	93027627	LTR	MERVL-int	ERVL	chr7MERVL-int93026640	ProperStrand	2	chrX	87961057	87961137	LTR	MERVL-int	ERVL	chrXMERVL-int87957745	ProperStrand	1	1	-inf
chr2	90235313	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr15	8660067	8660084	protein_coding	Slc1a3	intron	ENSMUSG00000005360	ProperStrand	10	1	-8.0457
chr13	58495854	58495944	protein_coding	Hnrnpk	exon	ENSMUSG00000021546	ProperStrand	117	chr11	120208442	120208528	protein_coding	Actg1	exon	ENSMUSG00000062825	ProperStrand	178	1	-9.7911
chr19	4793874	4793948	protein_coding	Rbm14	utr5	ENSMUSG00000006456	ProperStrand	84	chr4	131865385	131865475	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	4	-11.3545
chr9	82820706	82820761	protein_coding	Phip	exon	ENSMUSG00000032253	ProperStrand	43	chr11	6428035	6428102	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.8060
chr6	129628834	129628851	protein_coding	Klrc1	exon	ENSMUSG00000030167	NonProperStrand	49	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-11.1716
chr8	13416893	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr16	15904328	15904344	protein_coding	2310008H04Rik	exon	ENSMUSG00000041974	ProperStrand	30	1	-7.8385
chr14	77424372	77424388	protein_coding	9030625A04Rik	utr3	ENSMUSG00000044350	NonProperStrand	152	chr19	8799581	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-4.9472
chr8	3803269	3803343	misc_RNA	RNaseP_nuc	.	ENSMUSG00000088025	ProperStrand	328	chr18	33954816	33954892	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-0.8364
chr6	146940991	146941020	protein_coding	Ppfibp1	exon	ENSMUSG00000016487	ProperStrand	11	chr2	125498911	125498928	protein_coding	Eid1	utr5	ENSMUSG00000091337	ProperStrand	60	1	-16.7896
chr4	138125348	138125364	protein_coding	Vwa5b1	exon	ENSMUSG00000028753	NonProperStrand	16	chr11	62416601	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-7.8033
chr11	29636448	29640981	protein_coding	Rtn4	exon	ENSMUSG00000020458	ProperStrand	117	chr13	51743579	51743630	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-5.5457
chr10	110918514	110918571	protein_coding	Nap1l1	intron	ENSMUSG00000058799	ProperStrand	185	chr5	108336412	108336490	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	3	-7.1939
chr10	116374652	116376259	protein_coding	Rab3ip	exon	ENSMUSG00000064181	ProperStrand	18	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	2	-12.2288
chr16	87062105	87062185	LTR	MTEa	MaLR	chr16MTEa87062122	NonProperStrand	1	chr16	87061921	87062011	Simple_repeat	(TG)n	Simple_repeat	chr16(TG)n87061921	NonProperStrand	1	1	-inf
chr11	80415108	80415125	protein_coding	Myo1d	exon	ENSMUSG00000035441	ProperStrand	144	chr18	75161533	75161585	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-5.4788
chr15	72376666	72376682	protein_coding	Kcnk9	exon	ENSMUSG00000036760	NonProperStrand	42	chr19	8798484	8798502	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-5.9105
chr2	130897117	130898333	protein_coding	Siglec1	exon	ENSMUSG00000027322	NonProperStrand	7	chr2	120133074	120133090	protein_coding	Pla2g4f	exon	ENSMUSG00000046971	ProperStrand	4	1	-inf
chr7	88170270	88170342	protein_coding	Zfp592	exon	ENSMUSG00000005621	ProperStrand	26	chr5	130300439	130300529	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.0304
chr2	129998665	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr10	94151578	94151595	protein_coding	Ccdc41	utr5	ENSMUSG00000020024	NonProperStrand	34	1	-9.2512
chr7	107249185	107255082	protein_coding	Pold3	exon	ENSMUSG00000030726	NonProperStrand	1	chr11	97642952	97643033	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-inf
chr2	163264261	163264278	protein_coding	Gdap1l1	utr5	ENSMUSG00000017943	NonProperStrand	30	chr16	23111777	23111803	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.0878
chr8	125020695	125020711	protein_coding	Fam38a	exon	ENSMUSG00000014444	ProperStrand	132	chr9	58746986	58750727	protein_coding	Neo1	exon	ENSMUSG00000032340	ProperStrand	35	1	-12.8188
chr4	63096447	63096537	protein_coding	Whrn	exon	ENSMUSG00000039137	ProperStrand	20	chr13	62644619	62644699	snoRNA	ENSMUSG00000075946_SNORA25	.	ENSMUSG00000075946	ProperStrand	11	1	-18.9447
chr19	10955756	10955772	protein_coding	Tmem109	intron	ENSMUSG00000034659	NonProperStrand	2	chr2	166889036	166889056	snoRNA	ENSMUSG00000077515_SNORD12	.	ENSMUSG00000077515	ProperStrand	191	1	-18.3692
chr7	17459688	17459706	lincRNA	9330104G04Rik	exon	ENSMUSG00000091869	NonProperStrand	1	chr11	6428102	6428154	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-inf
chr16	18834657	18834673	protein_coding	Ufd1l	utr3	ENSMUSG00000005262	ProperStrand	3	chr7	7089290	7089306	protein_coding	Zfp773	exon	ENSMUSG00000063535	ProperStrand	16	1	-inf
chr1	134902047	134902132	protein_coding	Mdm4	intron	ENSMUSG00000054387	ProperStrand	95	chr2	32818815	32818905	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-4.5821
chr3	113827103	113827119	protein_coding	Col11a1	utr3	ENSMUSG00000027966	NonProperStrand	139	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-7.2512
chr5	116917506	116917606	protein_coding	Srrm4	exon	ENSMUSG00000063919	NonProperStrand	9	chr10	110918549	110918605	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-7.1883
chr12	8681608	8681651	protein_coding	Pum2	utr5	ENSMUSG00000020594	ProperStrand	39	chr13	38079623	38081413	protein_coding	Ssr1	exon	ENSMUSG00000021427	ProperStrand	65	2	-18.7892
chr11	57643156	57643173	protein_coding	Hand1	exon	ENSMUSG00000037335	ProperStrand	1	chr17	24857795	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-inf
chr15	73937277	73937293	LTR	MER31A	ERV1	chr15MER31A73937233	NonProperStrand	18	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-11.0322
chr9	15118245	15118377	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	chr4	122970392	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	6	-1.2783
chr19	5801045	5801070	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	1	-1.7059
chr2	172825858	172825875	protein_coding	Rae1	utr5	ENSMUSG00000027509	NonProperStrand	44	chr16	23111375	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-3.1696
chr11	88176486	88176503	antisense	Gm15893	.	ENSMUSG00000085246	ProperStrand	1	chr9	120039533	120039573	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-inf
chr12	37040848	37040865	protein_coding	Sostdc1	utr5	ENSMUSG00000036169	NonProperStrand	13	chr16	23110902	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-4.2316
chr7	125897344	125897434	protein_coding	9030624J02Rik	exon	ENSMUSG00000030982	ProperStrand	18	chr2	130101991	130102071	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-7.7579
chr5	74489203	74489307	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr13	51743566	51743661	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	2	-0.9463
chr9	117949735	117949786	protein_coding	Azi2	utr5	ENSMUSG00000039285	ProperStrand	12	chr2	26493422	26493483	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	3	-15.9821
chr3	37750806	37750824	LINE	L1_Mus3	L1	chr3L1_Mus337750762	ProperStrand	38	chr6	71832629	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-6.5128
chr7	19935606	19936050	protein_coding	Ercc1	exon	ENSMUSG00000003549	NonProperStrand	35	chr3	153599268	153599291	protein_coding	Acadm	exon	ENSMUSG00000062908	ProperStrand	14	1	-17.4122
chr2	90235294	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	105278600	105278616	protein_coding	Ccdc59	exon	ENSMUSG00000019897	ProperStrand	21	1	-6.5250
chr2	80388993	80389093	protein_coding	Nckap1	exon	ENSMUSG00000027002	ProperStrand	21	chr7	52382752	52382826	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-8.8621
chr3	133207172	133207199	protein_coding	Tet2	utr5	ENSMUSG00000040943	ProperStrand	192	chr9	70574413	70574430	protein_coding	Adam10	intron	ENSMUSG00000054693	NonProperStrand	7	1	-15.4404
chr15	90799811	90799829	protein_coding	Kif21a	intron	ENSMUSG00000022629	ProperStrand	18	chr17	35293364	35293393	protein_coding	Prrc2a	exon	ENSMUSG00000024393	ProperStrand	315	1	-12.4333
chr1	88247778	88247878	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	chr17	24856620	24856684	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	8	-4.3604
chr8	37640153	37640243	protein_coding	Dlc1	exon	ENSMUSG00000031523	ProperStrand	89	chr3	95980313	95980393	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-6.0785
chr7	26454330	26454350	protein_coding	Tmem91	utr3	ENSMUSG00000061702	ProperStrand	4	chr5	121655017	121655153	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	4	-inf
chr16	20368586	20368640	protein_coding	Abcc5	exon	ENSMUSG00000022822	ProperStrand	30	chr14	31867350	31867368	protein_coding	Pbrm1	exon	ENSMUSG00000042323	ProperStrand	87	1	-13.9714
chr4	155194224	155194289	protein_coding-noncoding	Ccnl2	utr5	ENSMUSG00000029068	ProperStrand	5	chr14	65611935	65613840	protein_coding	Ints9	exon	ENSMUSG00000021975	ProperStrand	10	2	-19.2096
chr18	74378857	74378873	protein_coding	Cxxc1	exon	ENSMUSG00000024560	NonProperStrand	19	chr9	15119968	15120029	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-9.5727
chr9	103115583	103115601	protein_coding	Gm20425	intron	ENSMUSG00000090639	ProperStrand	22	chr1	162968267	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-8.8327
chr16	23111691	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	chr15	79908929	79909019	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	36	-0.9093
chr15	61819101	61819128	protein_coding	Myc	exon	ENSMUSG00000022346	NonProperStrand	4	chr8	73419657	73419718	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-14.2162
chr13	55391588	55392563	protein_coding	Nsd1	exon	ENSMUSG00000021488	ProperStrand	186	chr7	52378400	52378460	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	1	-6.2585
chr19	31157628	31157644	protein_coding	Cstf2t	exon	ENSMUSG00000053536	ProperStrand	48	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-5.6476
chr10	99981456	99981497	protein_coding	Cep290	utr5	ENSMUSG00000019971	ProperStrand	12	chrX	71517821	71517868	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-9.8053
chr17	25325271	25325292	Low_complexity	GC_rich	Low_complexity	chr17GC_rich25325266	NonProperStrand	1	chr12	113866521	113870495	protein_coding	Adssl1	exon	ENSMUSG00000011148	ProperStrand	2	1	-inf
chr11	60370927	60370943	protein_coding	Alkbh5	utr3	ENSMUSG00000042650	ProperStrand	203	chr17	73518995	73537226	protein_coding	Lclat1	exon	ENSMUSG00000054469	ProperStrand	10	1	-14.5368
chr11	98556874	98556997	protein_coding	Psmd3	utr3	ENSMUSG00000017221	ProperStrand	51	chr16	23110852	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	12	-16.0820
chr4	21803525	21803543	protein_coding	Sfrs18	utr3	ENSMUSG00000028248	NonProperStrand	26	chr10	23505151	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.5465
chr6	125075012	125075055	protein_coding	Chd4	intron	ENSMUSG00000063870	ProperStrand	303	chr2	91436229	91436319	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	2	-7.2197
chr8	26827320	26827337	protein_coding	Whsc1l1	utr3	ENSMUSG00000054823	NonProperStrand	17	chr11	97642952	97643034	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.8122
chr4	132277374	132277396	protein_coding	Eya3	utr3	ENSMUSG00000028886	NonProperStrand	9	chr9	15119645	15119735	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-10.3457
chr14	75347522	75347581	protein_coding	Lrch1	utr5	ENSMUSG00000068015	ProperStrand	14	chr10	23506278	23506342	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-9.8925
chr11	97030204	97030229	protein_coding	Kpnb1	exon	ENSMUSG00000001440	ProperStrand	197	chr9	120037927	120038027	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-2.5271
chr4	115484059	115484085	protein_coding	Atpaf1	utr3	ENSMUSG00000028710	ProperStrand	202	chr5	77385698	77385756	protein_coding	Paics	exon	ENSMUSG00000029247	ProperStrand	78	2	-16.2785
chr2	91771603	91771797	protein_coding	Mdk	utr5	ENSMUSG00000027239	ProperStrand	56	chr8	46037195	46037231	protein_coding	Fat1	exon	ENSMUSG00000070047	ProperStrand	306	1	-10.1870
chr4	138832907	138832925	protein_coding	Capzb	intron	ENSMUSG00000028745	NonProperStrand	21	chr1	162965987	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-5.6256
chr2	33420695	33420713	protein_coding	Lmx1b	exon	ENSMUSG00000038765	NonProperStrand	5	chrX	84483704	84483729	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-13.4112
chr11	69480823	69480868	protein_coding	Eif4a1	utr3	ENSMUSG00000059796	ProperStrand	108	chr9	15119971	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-6.0904
chr14	34132845	34132861	protein_coding	Arhgap22	intron	ENSMUSG00000063506	ProperStrand	11	chr18	73693166	73693190	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-8.9451
chrX	71517176	71517537	protein_coding	Rpl10	exon	ENSMUSG00000008682	ProperStrand	71	chr10	110918549	110918629	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-3.1426
chr13	9833550	9833635	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr1	71670897	71693533	protein_coding	Fn1	intron	ENSMUSG00000026193	ProperStrand	931	3	-2.0326
chr11	6428076	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	NonProperStrand	91	chr7	116663629	116663733	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	NonProperStrand	51	3	-20.4935
chr7	19737937	19737995	protein_coding	Snrpd2	exon	ENSMUSG00000040824	ProperStrand	23	chr2	26768382	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	2	-12.0773
chr16	30959438	30959518	protein_coding	AI480653	intron	ENSMUSG00000047434	ProperStrand	29	chr11	6428077	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-7.6010
chr1	45488603	45488620	protein_coding	Col5a2	intron	ENSMUSG00000026042	ProperStrand	184	chr5	108336363	108336408	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-2.8030
chr3	100855517	100855533	protein_coding	Ptgfrn	intron	ENSMUSG00000027864	NonProperStrand	2	chr4	131908248	131908298	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-8.3123
chr7	28421172	28421284	protein_coding	Akt2	exon	ENSMUSG00000004056	ProperStrand	100	chr1	159342949	159342965	protein_coding	2810025M15Rik	utr5	ENSMUSG00000049881	NonProperStrand	5	1	-17.4350
chr1	164640481	164640571	protein_coding	Prrc2c	exon	ENSMUSG00000040225	ProperStrand	413	chr2	22444485	22444565	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-4.0183
chr16	87700688	87700705	protein_coding	Bach1	intron	ENSMUSG00000025612	NonProperStrand	20	chr9	109881457	109881502	protein_coding	Mtap4	exon	ENSMUSG00000032479	ProperStrand	188	1	-13.2519
chr8	127390555	127390615	protein_coding	Gnpat	intron	ENSMUSG00000031985	ProperStrand	20	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-9.9457
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr17	27845004	27845397	protein_coding	Pacsin1	exon	ENSMUSG00000040276	ProperStrand	15	1	-9.1639
chr7	52382112	52382157	protein_coding	Rpl13a	exon	ENSMUSG00000074129	ProperStrand	269	chr2	130101241	130101302	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	2	-6.2501
chr18	38005056	38005135	protein_coding	Diap1	exon	ENSMUSG00000024456	ProperStrand	77	chr16	18240811	18240886	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	1	-8.6256
chr11	116402678	116402731	protein_coding	Ube2o	exon	ENSMUSG00000020802	ProperStrand	134	chr14	13022704	13022720	protein_coding	Ptprg	intron	ENSMUSG00000021745	ProperStrand	72	1	-11.3336
chr9	63868722	63868738	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	chr5	108336363	108336407	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-0.9170
chr17	46702321	46702421	protein_coding	Ptk7	exon	ENSMUSG00000023972	ProperStrand	101	chr11	62416593	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-4.1682
chr7	108971290	108971306	protein_coding	Inppl1	utr3	ENSMUSG00000032737	ProperStrand	272	chr11	55296275	55296334	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-3.2977
chr2	22213565	22213645	protein_coding-noncoding	Myo3a	utr5	ENSMUSG00000025716	NonProperStrand	1	chr2	22213228	22213318	protein_coding	Myo3a	intron	ENSMUSG00000025716	NonProperStrand	7	1	-inf
chr2	75878177	75878195	protein_coding	Pde11a	intron	ENSMUSG00000075270	ProperStrand	11	chr17	39985546	39985629	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-9.3627
chr13	98715680	98716842	protein_coding	Rgnef	exon	ENSMUSG00000021662	ProperStrand	30	chr10	80641848	80641897	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	10	-20.1089
chr8	113447150	113447169	protein_coding	St3gal2	intron	ENSMUSG00000031749	ProperStrand	206	chr16	20107683	20114678	protein_coding	Klhl24	exon	ENSMUSG00000062901	ProperStrand	212	1	-8.3133
chr11	69037669	69037685	protein_coding	Gucy2e	exon	ENSMUSG00000020890	NonProperStrand	99	chr19	8963111	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.4882
chr9	108110634	108110657	protein_coding	Dag1	exon	ENSMUSG00000039952	ProperStrand	54	chr16	23111416	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.4069
chr6	54379743	54379760	lincRNA	9130019P16Rik	exon	ENSMUSG00000073067	ProperStrand	255	chr6	4705124	4705190	protein_coding	Peg10	exon	ENSMUSG00000092035	ProperStrand	102	1	-9.3480
chr1	71080394	71080484	protein_coding	Bard1	intron	ENSMUSG00000026196	ProperStrand	44	chr18	35714196	35714276	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-6.7669
chr7	105241587	105241687	protein_coding	Myo7a	intron	ENSMUSG00000030761	NonProperStrand	33	chr19	25016725	25016791	snoRNA	ENSMUSG00000064896_SNORA19	.	ENSMUSG00000064896	ProperStrand	88	1	-13.7508
chr3	41400604	41400652	protein_coding	Phf17	exon	ENSMUSG00000025764	ProperStrand	101	chr2	145077959	145209256	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-6.6887
chr11	74473073	74473206	protein_coding	1300001I01Rik	exon	ENSMUSG00000020741	ProperStrand	76	chr17	24857723	24857813	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.9111
chr6	67221934	67221968	protein_coding	Serbp1	exon	ENSMUSG00000036371	ProperStrand	261	chr9	66305355	66306011	protein_coding	Herc1	exon	ENSMUSG00000038664	ProperStrand	81	1	-9.7634
chr10	110918547	110918635	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	chr1	173041632	173041649	tRNA	tRNA710-ValCAC	.	466566	ProperStrand	206	1	-1.3973
chr7	35004080	35005643	protein_coding	Gpi1	exon	ENSMUSG00000036427	ProperStrand	288	chr11	108204937	108204953	protein_coding	Prkca	exon	ENSMUSG00000050965	ProperStrand	48	1	-10.6188
chr1	84757399	84757469	protein_coding	Trip12	exon	ENSMUSG00000026219	ProperStrand	248	chr19	4058089	4058105	protein_coding	BC021614	exon	ENSMUSG00000058216	NonProperStrand	2	1	-18.0988
chr5	30092932	30107756	protein_coding	Dnajb6	exon	ENSMUSG00000029131	ProperStrand	81	chr9	15119650	15119713	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.1235
chr8	15028834	15028852	protein_coding	Kbtbd11	exon	ENSMUSG00000055675	ProperStrand	10	chr16	23111391	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.3721
chr19	10059324	10059372	protein_coding	Fth1	exon	ENSMUSG00000024661	ProperStrand	75	chr18	35716785	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.8113
chr6	39472677	39472777	protein_coding	Dennd2a	exon	ENSMUSG00000038456	ProperStrand	13	chr7	118219575	118219603	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-7.1950
chr2	97423908	97423926	protein_coding	Lrrc4c	intron	ENSMUSG00000050587	NonProperStrand	16	chr4	131908246	131908297	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.6705
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr9	15119631	15119767	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	12	-1.9508
chr1	33522495	33522595	protein_coding	Prim2	intron	ENSMUSG00000026134	ProperStrand	42	chr1	162968218	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-7.5277
chr8	71326293	71326831	protein_coding	Ints10	exon	ENSMUSG00000031864	ProperStrand	28	chr5	89383967	89457318	protein_coding	Slc4a4	exon	ENSMUSG00000060961	NonProperStrand	195	1	-12.4912
chr8	123496701	123712567	protein_coding	Gm20388	intron	ENSMUSG00000092329	NonProperStrand	203	chr10	23505152	23505237	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-0.7083
chr13	105938287	105938303	protein_coding	Rnf180	intron	ENSMUSG00000021720	ProperStrand	5	chr11	6428077	6428155	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-8.1751
chr8	125011425	125021884	protein_coding	Fam38a	exon	ENSMUSG00000014444	ProperStrand	132	chr16	23111389	23111479	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-1.5952
chr1	183747121	183747441	protein_coding	Lbr	exon	ENSMUSG00000004880	ProperStrand	97	chr8	87426787	87426805	protein_coding	Klf1	exon	ENSMUSG00000054191	NonProperStrand	70	3	-inf
chr9	57593968	57594005	protein_coding	Edc3	intron	ENSMUSG00000038957	ProperStrand	19	chr18	75161562	75161596	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	2	-15.1002
chr17	30730247	30730263	protein_coding	Glo1	utr3	ENSMUSG00000024026	ProperStrand	75	chr5	111812088	111812105	protein_coding	Pitpnb	exon	ENSMUSG00000050017	ProperStrand	137	1	-11.2073
chr15	79940929	79941029	protein_coding	Syngr1	exon	ENSMUSG00000022415	ProperStrand	51	chr1	162965986	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	6	-20.1309
chr3	100726559	100726577	protein_coding	Trim45	utr5	ENSMUSG00000033233	ProperStrand	59	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.3068
chr7	17040701	17040717	protein_coding	Tmem160	exon	ENSMUSG00000019158	ProperStrand	55	chr3	123210929	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.2092
chr14	73995186	73995276	protein_coding	Sucla2	utr3	ENSMUSG00000022110	ProperStrand	20	chr16	23111386	23111466	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.0472
chr4	140261738	140273013	protein_coding	Rcc2	exon	ENSMUSG00000040945	ProperStrand	228	chr19	8800355	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	4	-5.5973
chr3	104667449	104667465	protein_coding	St7l	utr5	ENSMUSG00000045576	ProperStrand	19	chr10	23505155	23505204	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.1073
chrX	96662030	96662082	protein_coding	Pja1	exon	ENSMUSG00000034403	ProperStrand	6	chr11	62416991	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-10.7711
chr15	102541849	102544296	protein_coding	Calcoco1	exon	ENSMUSG00000023055	ProperStrand	29	chr7	51505233	51505313	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	2	-15.2196
chr5	93473404	93473421	protein_coding	Sowahb	exon	ENSMUSG00000045314	ProperStrand	16	chr18	73693085	73693108	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-8.1701
chrX	138159145	138159161	protein_coding	Irs4	exon	ENSMUSG00000054667	NonProperStrand	98	chr16	34549713	34549733	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-10.6995
chr2	26493360	26494878	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr2	26493361	26493503	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	669	-inf
chr5	23825941	23825957	protein_coding	Kcnh2	exon	ENSMUSG00000038319	ProperStrand	242	chr7	117189876	117189943	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-1.0918
chr7	107065549	107065565	protein_coding	Xrra1	exon	ENSMUSG00000035211	NonProperStrand	24	chr4	131908356	131908410	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.9196
chr7	104554445	104554469	protein_coding	Ndufc2	intron	ENSMUSG00000030647	ProperStrand	10	chr7	51503492	51503548	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	4	-20.8564
chr11	33060888	33062952	protein_coding	Npm1	exon	ENSMUSG00000057113	ProperStrand	352	chr18	35716802	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-0.8191
chr4	131865380	131865460	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	chr11	106874212	106874254	tRNA	tRNA945-ArgCCG	.	1431073	ProperStrand	133	1	-2.5635
chr8	37279590	37279680	protein_coding	Lonrf1	utr3	ENSMUSG00000039633	ProperStrand	13	chr17	24857718	24857798	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-5.1456
chr15	76370221	76370321	protein_coding	Slc52a2	exon	ENSMUSG00000022560	ProperStrand	16	chr10	23505151	23505213	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.4264
chr17	45708559	45708752	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr8	122147973	122147989	protein_coding	Kcng4	utr3	ENSMUSG00000045246	NonProperStrand	4	1	-12.3862
chr1	36758840	36758920	protein_coding-noncoding	Actr1b	utr3	ENSMUSG00000037351	NonProperStrand	1	chr1	36759075	36759165	protein_coding	Actr1b	intron	ENSMUSG00000037351	NonProperStrand	2	1	-inf
chr2	27323278	27323298	protein_coding	Brd3	intron	ENSMUSG00000026918	ProperStrand	85	chr8	73419649	73419712	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.5178
chr9	39358287	39358304	protein_coding	Olfr958	exon	ENSMUSG00000050853	NonProperStrand	266	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-4.8164
chr10	7387175	7387255	protein_coding	Pcmt1	intron	ENSMUSG00000019795	NonProperStrand	4	chr10	7387443	7387533	protein_coding	Nup43	intron	ENSMUSG00000040034	ProperStrand	7	1	-inf
chr8	13416895	13416912	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr13	76341035	76341055	protein_coding	Fam81b	intron	ENSMUSG00000078966	NonProperStrand	220	2	-6.6246
chr16	36919324	36919414	protein_coding	Golgb1	exon	ENSMUSG00000034243	ProperStrand	92	chr9	120037975	120038055	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-3.8948
chr6	91673277	91673308	protein_coding	Slc6a6	utr5	ENSMUSG00000030096	ProperStrand	206	chr10	90581102	90581192	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-2.5412
chr15	77597977	77597993	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr10	80078436	80078454	protein_coding	Scamp4	utr3	ENSMUSG00000078441	NonProperStrand	20	1	-11.0318
chr6	13534144	13534161	protein_coding	Tmem168	intron	ENSMUSG00000029569	ProperStrand	17	chr7	116663634	116663712	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.8573
chr13	59901918	59901935	protein_coding	Zcchc6	exon	ENSMUSG00000035248	NonProperStrand	10	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-7.1231
chr5	115698978	115699078	protein_coding	Rnf10	exon	ENSMUSG00000041740	ProperStrand	95	chr7	29136525	29136573	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.6289
chr13	30338191	30338207	protein_coding	Mboat1	utr3	ENSMUSG00000038732	NonProperStrand	148	chr4	131865380	131865468	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-2.3820
chr11	62526983	62526999	protein_coding	Zfp287	utr3	ENSMUSG00000005267	ProperStrand	1	chr7	116664871	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-inf
chr6	144443231	144443249	lincRNA	Gm15685	intron	ENSMUSG00000087157	ProperStrand	24	chr17	39985356	39985392	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-7.7605
chr2	61375346	61375426	LTR	ORR1A4-int	MaLR	chr2ORR1A4-int61374029	NonProperStrand	1	chr9	74956704	74956794	protein_coding	Myo5a	intron	ENSMUSG00000034593	NonProperStrand	9	1	-inf
chr8	13483725	13493886	protein_coding	Gas6	exon	ENSMUSG00000031451	ProperStrand	27	chr2	130102039	130102085	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-6.9376
chr9	65025209	65025299	protein_coding	Igdcc3	exon	ENSMUSG00000032394	ProperStrand	17	chr5	108336372	108336452	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-7.3855
chr5	88058276	88058366	LTR	MT2C_Mm	ERVL	chr5MT2C_Mm88058215	ProperStrand	1	chr5	88058037	88058117	LTR	MTC	MaLR	chr5MTC88057986	NonProperStrand	1	1	-inf
chr8	89370740	89370785	protein_coding	N4bp1	exon	ENSMUSG00000031652	ProperStrand	98	chr1	89673721	89673772	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	2	-4.2482
chr10	59762612	59762697	protein_coding	Psap	exon	ENSMUSG00000004207	ProperStrand	124	chr11	11162010	11162026	protein_coding	Vwc2	utr3	ENSMUSG00000050830	NonProperStrand	4	2	-inf
chr15	76734764	76736677	protein_coding	Rpl8	exon	ENSMUSG00000003970	ProperStrand	191	chr19	8800355	8800434	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	5	-8.3612
chr1	71636748	71687820	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr11	6428035	6428156	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	6	-1.4586
chr15	4104401	4104491	protein_coding	Oxct1	utr3	ENSMUSG00000022186	ProperStrand	48	chr7	150717343	150717423	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-5.9449
chr4	131865356	131865456	lincRNA	Snhg12	intron	ENSMUSG00000086290	ProperStrand	178	chr9	78023109	78023164	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	1	-3.7919
chr5	144266771	144266812	protein_coding	Rac1	utr3	ENSMUSG00000001847	ProperStrand	32	chr4	131908687	131908710	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-3.9305
chr19	9090476	9092408	protein_coding	Ahnak	exon	ENSMUSG00000069833	ProperStrand	103	chr10	23505152	23505254	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	6	-5.9515
chr9	78328132	78328152	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr17	37115382	37115427	protein_coding	2410137M14Rik	utr3	ENSMUSG00000064308	ProperStrand	4	1	-11.9830
chr8	35209683	35209705	protein_coding	Leprotl1	intron	ENSMUSG00000031513	ProperStrand	7	chr17	24665420	24665444	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-9.3014
chr5	103854542	103891155	protein_coding	Ptpn13	utr5	ENSMUSG00000034573	NonProperStrand	74	chr15	34370631	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-3.1665
chr7	134360094	134360131	protein_coding	Sept1	intron	ENSMUSG00000000486	ProperStrand	7	chr4	131865933	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.7768
chr13	23949449	23949467	protein_coding	Slc17a3	intron	ENSMUSG00000036083	ProperStrand	2	chr7	116664872	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-9.7350
chr3	54564829	54564847	protein_coding	Smad9	intron	ENSMUSG00000027796	ProperStrand	24	chr6	115758051	115758120	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-7.2924
chr16	38548581	38548599	protein_coding	Poglut1	exon	ENSMUSG00000034064	ProperStrand	8	chr11	68886944	68887033	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-8.1810
chr4	59881148	59881165	protein_coding	Snx30	exon	ENSMUSG00000028385	ProperStrand	8	chr19	8963027	8963077	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-6.1145
chr4	154500680	154500696	protein_coding	Morn1	intron	ENSMUSG00000029049	NonProperStrand	22	chr8	10924953	10924969	protein_coding	3930402G23Rik	utr3	ENSMUSG00000038917	ProperStrand	13	1	-18.3400
chr9	48883037	48883137	protein_coding	Zw10	exon	ENSMUSG00000032264	ProperStrand	20	chr9	15118334	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-5.5777
chr2	65376282	65376298	protein_coding	Scn3a	intron	ENSMUSG00000057182	ProperStrand	26	chr9	15119714	15119768	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.1620
chr2	26447688	26447704	protein_coding	Egfl7	exon	ENSMUSG00000026921	NonProperStrand	7	chr9	120037971	120038026	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-9.0569
chr8	97303827	97303845	protein_coding	Cx3cl1	exon	ENSMUSG00000031778	ProperStrand	3	chr2	26494825	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-9.2771
chr7	4744985	4745140	protein_coding	Rpl28	exon	ENSMUSG00000030432	ProperStrand	220	chr1	162966834	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	2	-6.3419
chr2	152104833	152104913	protein_coding	Csnk2a1	utr3	ENSMUSG00000074698	ProperStrand	91	chr11	6519809	6519899	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-7.1131
chr5	34093396	34093445	protein_coding	Letm1	intron	ENSMUSG00000005299	ProperStrand	21	chr6	85416638	85416703	protein_coding	Cct7	exon	ENSMUSG00000030007	ProperStrand	173	6	-22.0990
chr8	13416897	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr12	52849618	52849634	protein_coding	Hectd1	exon	ENSMUSG00000035247	NonProperStrand	43	1	-7.1164
chr9	78023109	78023162	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr11	102149605	102149651	protein_coding	Tmub2	exon	ENSMUSG00000034757	ProperStrand	9	2	-15.5165
chr7	16677708	16678201	protein_coding	Zfp541	exon	ENSMUSG00000078796	ProperStrand	33	chr15	5068412	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	6	-21.4298
chr10	80643031	80645046	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr19	8798485	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	5	-1.4818
chr4	57706987	57707003	protein_coding	Palm2	intron	ENSMUSG00000090053	NonProperStrand	187	chr12	17552949	17553016	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-2.9650
chr9	114597999	114598089	protein_coding	Dync1li1	exon	ENSMUSG00000032435	ProperStrand	33	chr9	120038471	120038551	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	11	-20.3496
chr7	3607493	3607639	protein_coding	Cnot3	exon	ENSMUSG00000035632	ProperStrand	55	chr4	131908294	131908355	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-4.5191
chr5	122110870	122110886	protein_coding	Brap	utr5	ENSMUSG00000029458	ProperStrand	36	chr9	120039544	120039622	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	4	-13.8065
chr16	96391551	96391615	protein_coding	Lca5l	intron	ENSMUSG00000045275	NonProperStrand	210	chr2	26768368	26768392	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-3.2302
chr12	121013882	121013962	LTR	RLTR10-int	ERVK	chr12RLTR10-int121013462	ProperStrand	1	chr17	12751683	12751773	LTR	IAP-d-int	ERVK	chr17IAP-d-int12750863	ProperStrand	1	1	-inf
chr13	98823878	98823907	protein_coding	Rgnef	exon	ENSMUSG00000021662	ProperStrand	30	chr9	77602490	77602508	protein_coding	Gclc	utr5	ENSMUSG00000032350	NonProperStrand	4	1	-inf
chr1	84739669	84739769	protein_coding	Trip12	exon	ENSMUSG00000026219	ProperStrand	248	chr9	15119722	15119968	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	4	-3.2891
chrX	98850364	98850413	protein_coding	Ogt	intron	ENSMUSG00000034160	ProperStrand	49	chr5	122691619	122691635	protein_coding	Tctn1	utr3	ENSMUSG00000038593	ProperStrand	34	1	-14.8775
chr6	142442733	142444111	protein_coding	Ldhb	exon	ENSMUSG00000030246	ProperStrand	224	chr6	113533434	113533450	protein_coding	Fancd2	exon	ENSMUSG00000034023	ProperStrand	65	1	-10.5108
chr12	110888917	110888948	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr7	132842932	132843032	protein_coding	Gtf3c1	exon	ENSMUSG00000032777	ProperStrand	161	1	-6.7028
chr13	51743566	51743703	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	chr11	69481334	69481479	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	9	-1.2243
chr3	84782021	84782090	protein_coding	Fbxw7	utr3	ENSMUSG00000028086	ProperStrand	11	chr17	67408688	67408706	protein_coding	Ptprm	intron	ENSMUSG00000033278	NonProperStrand	11	1	-19.3304
chr13	57173594	57173684	LINE	L1Md_F2	L1	chr13L1Md_F257173470	NonProperStrand	1	chr7	54442451	54442541	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-inf
chr3	157569209	157570314	protein_coding	Cth	exon	ENSMUSG00000028179	ProperStrand	14	chr11	69483151	69483231	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-8.5983
chr7	4099575	4099641	protein_coding	Leng8	utr3	ENSMUSG00000035545	ProperStrand	49	chr13	76341035	76341055	protein_coding	Fam81b	intron	ENSMUSG00000078966	NonProperStrand	220	1	-11.1161
chr17	56536050	56536068	protein_coding	Kdm4b	exon	ENSMUSG00000024201	ProperStrand	45	chr11	69481394	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.7296
chr13	69758387	69758487	protein_coding	Nsun2	exon	ENSMUSG00000021595	ProperStrand	110	chr15	79913288	79913343	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.5108
chr7	29136524	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	chr4	132394296	132394462	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	17	-14.9155
chr12	77210842	77210932	protein_coding	Syne2	exon	ENSMUSG00000063450	ProperStrand	63	chr4	131865867	131865948	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.6928
chr16	3856861	3856878	protein_coding	Zfp174	utr3	ENSMUSG00000054939	NonProperStrand	166	chr19	8990762	8990829	protein_coding	Ganab	utr3	ENSMUSG00000071650	ProperStrand	145	3	-inf
chr12	110881075	110881115	lincRNA	Rian	intron	ENSMUSG00000091793	ProperStrand	612	chr18	48207091	48207176	protein_coding	Gm5506	exon	ENSMUSG00000059040	ProperStrand	105	6	-20.4631
chr2	74494800	74494817	protein_coding	Evx2	intron	ENSMUSG00000001815	NonProperStrand	3	chr3	123210883	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-8.0648
chr17	74768300	74768596	protein_coding	Spast	exon	ENSMUSG00000024068	ProperStrand	13	chr10	39978449	39978485	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	2	-13.6679
chr8	81030578	81030603	protein_coding	Rbmxl1	exon	ENSMUSG00000037070	ProperStrand	13	chr4	131908809	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-6.5299
chr5	125866376	125866466	protein_coding	Ubc	utr3	ENSMUSG00000008348	ProperStrand	13	chr5	130295724	130295794	protein_coding	Cct6a	exon	ENSMUSG00000029447	ProperStrand	128	2	-20.7731
chr1	73961129	73961210	protein_coding	Tns1	exon	ENSMUSG00000055322	ProperStrand	63	chrX	71517831	71517921	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-6.4489
chr9	108109591	108109671	protein_coding	Dag1	exon	ENSMUSG00000039952	ProperStrand	54	chr17	35089181	35089210	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-5.6915
chr19	3602388	3602405	protein_coding	Lrp5	exon	ENSMUSG00000024913	ProperStrand	145	chr13	51743592	51743692	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-5.1294
chrX	137517987	137518005	protein_coding	Atg4a	intron	ENSMUSG00000079418	ProperStrand	4	chr1	162965531	162965592	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-8.7752
chr15	82028206	82030154	protein_coding	Srebf2	exon	ENSMUSG00000022463	ProperStrand	592	chr11	77995191	77995237	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-1.9685
chr10	114640176	114640266	protein_coding	Tbc1d15	exon	ENSMUSG00000020130	ProperStrand	12	chr16	23111377	23111457	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.0123
chr18	84840229	84840245	protein_coding	Cndp2	exon	ENSMUSG00000024644	ProperStrand	10	chr9	78328136	78328181	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-9.9725
chr15	12763653	12763712	protein_coding	Drosha	exon	ENSMUSG00000022191	ProperStrand	163	chr10	127521196	127521271	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	1	-6.8046
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chrX	71517869	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	4	-6.2096
chr6	110946537	110946559	protein_coding	Grm7	intron	ENSMUSG00000056755	ProperStrand	13	chr5	74489543	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-6.7799
chr2	86138158	86138174	protein_coding	Olfr1052	exon	ENSMUSG00000047149	NonProperStrand	119	chr1	162965531	162965588	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.0912
chr8	59992260	59992847	protein_coding	Hmgb2	exon	ENSMUSG00000054717	ProperStrand	184	chr10	41644311	41644329	protein_coding	Armc2	exon	ENSMUSG00000071324	ProperStrand	281	1	-7.9778
chr2	32563527	32563545	protein_coding	Cdk9	exon	ENSMUSG00000009555	NonProperStrand	49	chr8	27091218	27091234	protein_coding	4930444A02Rik	utr3	ENSMUSG00000037251	NonProperStrand	57	1	-13.8259
chr7	136800631	136800649	SINE	RSINE1	B4	chr7RSINE1136800606	ProperStrand	216	chrX	71517909	71517956	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-4.0658
chr11	62416950	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	chr11	69483136	69483283	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	67	-inf
chr2	172182644	172182687	protein_coding	Aurka	exon	ENSMUSG00000027496	ProperStrand	31	chr7	118219574	118219642	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-5.4472
chr8	90186368	90210379	protein_coding	Zfp423	exon	ENSMUSG00000045333	ProperStrand	33	chr15	79913292	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	9	-19.5583
chr3	146170441	146170478	protein_coding	Rpf1	intron	ENSMUSG00000028187	ProperStrand	2	chr18	33954815	33954894	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-10.8123
chr6	108341931	108342577	protein_coding	Itpr1	exon	ENSMUSG00000030102	ProperStrand	94	chr11	55296312	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	3	-12.3824
chr7	26248136	26248202	protein_coding	Ceacam1	utr3	ENSMUSG00000074272	NonProperStrand	1	chr8	13876175	13876230	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-inf
chr14	31316050	31318772	protein_coding	Dcp1a	exon	ENSMUSG00000021962	ProperStrand	20	chr11	69483136	69483219	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.4692
chrX	147476948	147476965	SINE	RSINE1	B4	chrXRSINE1147476844	NonProperStrand	20	chr2	31795036	31795099	protein_coding	Lamc3	exon	ENSMUSG00000026840	ProperStrand	3	1	-inf
chr11	45915166	45915184	protein_coding	Adam19	intron	ENSMUSG00000011256	NonProperStrand	8	chr1	162966812	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-10.3686
chr10	80570642	80570712	protein_coding	Map2k2	intron	ENSMUSG00000035027	ProperStrand	26	chr4	131908266	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.7765
chr14	100521841	100521931	protein_coding	Klf12	intron	ENSMUSG00000072294	NonProperStrand	7	chr14	100521949	100522039	protein_coding	Klf12	intron	ENSMUSG00000072294	ProperStrand	14	1	-inf
chr2	173603577	173603677	protein_coding	Vapb	exon	ENSMUSG00000054455	ProperStrand	29	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.6651
chr19	32464273	32464289	lincRNA	2700046G09Rik	exon	ENSMUSG00000024893	ProperStrand	59	chr7	26078832	26078863	protein_coding	Cic	utr3	ENSMUSG00000005442	ProperStrand	80	1	-12.7697
chr16	57391723	57391789	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr13	51743580	51743662	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	NonProperStrand	5	1	-15.4686
chrX	45526079	45526139	protein_coding	Zdhhc9	utr3	ENSMUSG00000036985	ProperStrand	32	chr11	55296215	55296305	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-7.4316
chr10	83063657	83063757	protein_coding	Appl2	exon	ENSMUSG00000020263	ProperStrand	15	chr3	123210853	123210893	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	5	-19.3071
chr13	99634984	99637009	protein_coding	Tnpo1	exon	ENSMUSG00000009470	ProperStrand	56	chr10	110918548	110918638	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	3	-8.8790
chr6	83111671	83111687	protein_coding	1700003E16Rik	exon	ENSMUSG00000030030	ProperStrand	352	chr16	87419194	87419252	snoRNA	ENSMUSG00000065647_SNORA2	.	ENSMUSG00000065647	ProperStrand	123	1	-8.3319
chr15	82980136	82980226	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr11	55296208	55296288	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	3	-2.8023
chr4	128860940	128860957	protein_coding	S100pbp	utr5	ENSMUSG00000040928	ProperStrand	12	chr14	76247754	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-7.3616
chr2	20707840	20707940	protein_coding	Etl4	intron	ENSMUSG00000036617	ProperStrand	86	chr1	162968450	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-5.3739
chr15	75879477	75879676	protein_coding	Scrib	exon	ENSMUSG00000022568	ProperStrand	154	chr5	130295414	130295494	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-3.4629
chr1	136304235	136304251	protein_coding	Cyb5r1	exon	ENSMUSG00000026456	NonProperStrand	3	chr4	131908688	131908808	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-inf
chr1	63225287	63225322	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	chr19	8800370	8800470	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-0.7902
chr12	110881048	110881114	lincRNA	Rian	intron	ENSMUSG00000091793	ProperStrand	612	chr13	49748868	49748924	protein_coding	Nol8	utr5	ENSMUSG00000021392	ProperStrand	39	1	-9.5327
chr7	83018142	83018209	protein_coding	Klhl25	utr3	ENSMUSG00000055652	ProperStrand	4	chr5	74489563	74489653	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-9.3217
chr2	76471660	76471676	protein_coding	Prkra	exon	ENSMUSG00000002731	NonProperStrand	65	chr16	23110455	23110508	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.3262
chr15	103183679	103184008	protein_coding	Itga5	exon	ENSMUSG00000000555	ProperStrand	28	chr15	34370550	34370630	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-5.0008
chr8	73393862	73393948	protein_coding	Ccdc124	exon	ENSMUSG00000007721	ProperStrand	11	chr11	80965641	80965658	protein_coding	Accn1	exon	ENSMUSG00000020704	NonProperStrand	228	1	-14.1016
chr13	88569462	88569482	LTR	RMER6D	ERVK	chr13RMER6D88569354	ProperStrand	42	chr6	35180639	35182467	protein_coding	Nup205	exon	ENSMUSG00000038759	ProperStrand	56	2	-20.6621
chr6	70794802	70794818	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chr6	115758062	115758117	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-3.6746
chr17	6232006	6232022	protein_coding	Tulp4	exon	ENSMUSG00000034377	NonProperStrand	265	chr19	8800420	8800443	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-1.1146
chr13	112538469	112538526	protein_coding	Map3k1	utr3	ENSMUSG00000021754	ProperStrand	113	chr13	49779671	49779761	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-5.7649
chr12	86250603	86250693	LTR	RLTR10C	ERVK	chr12RLTR10C86250292	ProperStrand	1	chr2	27001924	27002004	antisense	Gm13399	.	ENSMUSG00000085008	ProperStrand	1	1	-inf
chr4	134386571	134386587	protein_coding	Tmem57	exon	ENSMUSG00000028826	ProperStrand	16	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-11.2747
chr4	129935595	129935986	protein_coding	Serinc2	exon	ENSMUSG00000023232	ProperStrand	5	chrX	165695583	165695599	protein_coding	Arhgap6	exon	ENSMUSG00000031355	ProperStrand	74	1	-17.8240
chr14	72973131	72973221	protein_coding	Fndc3a	exon	ENSMUSG00000033487	ProperStrand	84	chr7	117166726	117166806	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-4.1735
chr17	13112540	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	chr17	71990923	71990999	snoRNA	ENSMUSG00000092713_CT010429.1	.	ENSMUSG00000092713	ProperStrand	182	1	-2.5496
chr1	180267210	180267310	protein_coding	Hnrnpu	exon	ENSMUSG00000039630	NonProperStrand	3	chr19	8800087	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	NonProperStrand	4	1	-inf
chr3	92687901	92687920	LINE	Lx2B	L1	chr3Lx2B92686827	ProperStrand	1	chr9	120038494	120038554	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-inf
chr2	118452653	118452696	protein_coding	Bub1b	exon	ENSMUSG00000040084	ProperStrand	45	chr1	162965548	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.8074
chr18	6785533	6785623	protein_coding	Rab18	intron	ENSMUSG00000073639	ProperStrand	9	chr18	73693121	73693147	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-9.3669
chr17	38290745	38290764	LTR	MurERV4-int	ERVK	chr17MurERV4-int38290059	ProperStrand	21	chr2	172198541	172198557	protein_coding	Cstf1	exon	ENSMUSG00000027498	NonProperStrand	3	1	-inf
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr4	73386189	73386205	protein_coding	Rasef	exon	ENSMUSG00000043003	NonProperStrand	8	1	-12.7255
chr8	73862854	73862870	protein_coding	Myo9b	exon	ENSMUSG00000004677	ProperStrand	78	chr2	179936554	179936751	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	1	-9.1699
chr11	74982439	74982456	protein_coding	Hic1	intron	ENSMUSG00000043099	NonProperStrand	8	chr7	117189863	117189944	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	3	-18.8998
chr8	87366739	87366885	protein_coding	Calr	exon	ENSMUSG00000003814	ProperStrand	232	chr5	109124122	109132306	protein_coding	Fgfrl1	exon	ENSMUSG00000008090	ProperStrand	111	1	-9.3674
chr2	26493392	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr12	110899514	110899538	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	2	-3.4857
chr17	45706455	45706531	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr2	12331701	12340795	protein_coding	Fam188a	exon	ENSMUSG00000026767	ProperStrand	11	1	-10.1742
chr11	63885336	63887052	protein_coding	Cox10	exon	ENSMUSG00000042148	NonProperStrand	187	chr14	33005038	33005095	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-1.9903
chr5	116101827	116101914	protein_coding	Ccdc64	utr5	ENSMUSG00000041609	ProperStrand	51	chr7	16677708	16678201	protein_coding	Zfp541	exon	ENSMUSG00000078796	ProperStrand	33	2	-18.9290
chr11	72023348	72023364	protein_coding	Txndc17	utr3	ENSMUSG00000020803	ProperStrand	7	chr11	97642952	97643079	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-6.6269
chr13	9833552	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr13	18945248	18945321	protein_coding	Vps41	exon	ENSMUSG00000041236	ProperStrand	31	4	-18.2330
chr14	99289494	99289513	SINE	B4A	B4	chr14B4A99289489	ProperStrand	1	chr1	162966812	162966852	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-inf
chr2	90235303	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	97489600	97489617	protein_coding	E130012A19Rik	exon	ENSMUSG00000043439	NonProperStrand	110	2	-5.6895
chr2	151386401	151386472	protein_coding	Fkbp1a	utr3	ENSMUSG00000032966	ProperStrand	36	chr17	35299513	35299613	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-5.7741
chr12	103121571	103121587	protein_coding	Trip11	exon	ENSMUSG00000021188	ProperStrand	15	chr17	24856708	24856739	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-9.2228
chr7	52382256	52382314	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	chr11	77995192	77995209	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-1.6198
chr6	81992904	81992925	protein_coding	Fam176a	intron	ENSMUSG00000035104	ProperStrand	64	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-8.0299
chr5	130759520	130759610	protein_coding	Tyw1	utr3	ENSMUSG00000056310	ProperStrand	32	chr2	26493366	26493445	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-4.9420
chr5	100855923	100855974	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr6	120338059	120338076	protein_coding	Kdm5a	exon	ENSMUSG00000030180	ProperStrand	57	2	-10.8763
chr16	8703520	8703583	protein_coding	Usp7	intron	ENSMUSG00000022710	ProperStrand	118	chr10	80364235	80364251	protein_coding	Lmnb2	utr3	ENSMUSG00000062075	ProperStrand	14	2	-inf
chr5	143722281	143731700	protein_coding	Fscn1	exon	ENSMUSG00000029581	ProperStrand	200	chr9	120039628	120039684	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	3	-3.9974
chrX	33560078	33560096	protein_coding	Dock11	exon	ENSMUSG00000031093	ProperStrand	42	chr11	69481335	69481458	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	5	-16.0993
chr5	100855923	100855943	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr4	56910496	56910618	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	4	-3.0244
chr11	120098077	120098093	protein_coding	Bahcc1	utr5	ENSMUSG00000039741	ProperStrand	118	chr3	88715213	88715230	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-5.8980
chr2	26493381	26493514	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr3	82816758	82816774	protein_coding	Fgg	exon	ENSMUSG00000033860	NonProperStrand	321	5	-13.1878
chr5	93035313	93035330	protein_coding	Stbd1	utr3	ENSMUSG00000047963	ProperStrand	9	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-8.7951
chr13	9833566	9833665	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr3	51081070	51081097	protein_coding	Elf2	intron	ENSMUSG00000037174	ProperStrand	21	1	-7.0324
chr11	85065555	85065645	SINE	B2_Mm1t	B2	chr11B2_Mm1t85065500	ProperStrand	6	chr7	31359637	31359707	protein_coding	Wbp7	exon	ENSMUSG00000006307	ProperStrand	180	6	-inf
chr5	36050138	36050184	protein_coding	Sh3tc1	exon	ENSMUSG00000036553	ProperStrand	16	chr2	32818810	32818900	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-8.1155
chrX	71026545	71027346	protein_coding	Idh3g	exon	ENSMUSG00000002010	ProperStrand	10	chr8	86535304	86535320	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	1	-15.0971
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr2	94253894	94258446	protein_coding	Api5	utr3	ENSMUSG00000027193	ProperStrand	51	4	-inf
chr4	11200202	11200226	protein_coding	Dpy19l4	exon	ENSMUSG00000045205	ProperStrand	13	chr1	162967510	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-6.4551
chr2	33013309	33013325	protein_coding	Ralgps1	exon	ENSMUSG00000038831	NonProperStrand	24	chr9	64023228	64023289	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	1	-10.2951
chr9	118330864	118330929	LINE	L2b	L2	chr9L2b118330827	ProperStrand	5	chr10	23506278	23506339	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	4	-19.1812
chr13	112540780	112541440	protein_coding	Map3k1	exon	ENSMUSG00000021754	ProperStrand	113	chr5	124980948	124981003	protein_coding	Rilpl1	utr5	ENSMUSG00000029392	ProperStrand	10	2	-22.8456
chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	chr8	73419657	73419680	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-1.7631
chr5	111129745	111129785	protein_coding	Ep400	exon	ENSMUSG00000029505	ProperStrand	176	chr7	150717298	150717367	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-3.4622
chr16	5432052	5432068	Low_complexity	CT-rich	Low_complexity	chr16CT-rich5432018	NonProperStrand	1	chr12	17552961	17553006	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-inf
chr4	145001605	145001695	processed_transcript	Gm13227	.	ENSMUSG00000085101	NonProperStrand	2	chr4	145177342	145177422	protein_coding	Gm13212	intron	ENSMUSG00000078502	NonProperStrand	1	1	-inf
chr4	147319221	147319295	protein_coding	2510039O18Rik	exon	ENSMUSG00000044496	ProperStrand	28	chr12	88912985	88913005	protein_coding	Gm2022	intron	ENSMUSG00000071217	NonProperStrand	57	1	-14.9519
chr5	121975281	121975297	protein_coding	Mapkapk5	intron	ENSMUSG00000029454	ProperStrand	22	chr4	141023897	141023933	protein_coding	Spen	utr3	ENSMUSG00000040761	ProperStrand	161	1	-13.3671
chr6	71341165	71341232	protein_coding	Rmnd5a	utr3	ENSMUSG00000002222	ProperStrand	38	chr17	35088957	35089003	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-6.7722
chr13	69767940	69767988	protein_coding	Nsun2	intron	ENSMUSG00000021595	ProperStrand	110	chr9	15119967	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-6.0544
chr4	116827119	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	chr2	166890802	166890858	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	1	-4.1960
chr9	78327729	78327759	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr7	88488682	88489247	protein_coding	Rps17	exon	ENSMUSG00000061787	ProperStrand	105	1	-5.2382
chr15	99826974	99827043	protein_coding	Larp4	exon	ENSMUSG00000023025	ProperStrand	41	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-6.6510
chr2	83501409	83501638	protein_coding	Zc3h15	exon	ENSMUSG00000027091	ProperStrand	37	chr11	68886926	68887006	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-5.0731
chr11	69730457	69732717	protein_coding	Eif5a	utr3	ENSMUSG00000078812	ProperStrand	164	chr5	130300448	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-3.1813
chr2	179770124	179770140	protein_coding	Lsm14b	utr3	ENSMUSG00000039108	ProperStrand	26	chr19	8800370	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-5.1258
chr11	62416575	62418036	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr10	110918550	110918687	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-0.8240
chr3	96654255	96654271	protein_coding	Pdzk1	exon	ENSMUSG00000038298	ProperStrand	101	chr11	62418013	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-4.5499
chr14	99453507	99453569	protein_coding	6720463M24Rik	intron	ENSMUSG00000022070	ProperStrand	23	chr4	131865391	131865481	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	2	-9.5962
chr9	62992379	62992395	protein_coding	Skor1	exon	ENSMUSG00000022245	NonProperStrand	70	chr5	139702765	139702820	protein_coding	Sun1	exon	ENSMUSG00000036817	ProperStrand	108	1	-11.8232
chr5	121068886	121069655	protein_coding	Ddx54	exon	ENSMUSG00000029599	ProperStrand	104	chr14	65372809	65372888	snoRNA	ENSMUSG00000064442_SNORA36	.	ENSMUSG00000064442	ProperStrand	296	1	-9.0118
chrX	20003644	20003661	protein_coding	Phf16	intron	ENSMUSG00000037315	NonProperStrand	8	chr4	135606296	135607118	protein_coding	Rpl11	exon	ENSMUSG00000059291	ProperStrand	152	1	-15.5645
chr4	129024929	129025029	protein_coding	Zbtb8os	utr3	ENSMUSG00000057572	ProperStrand	15	chr10	110918599	110918634	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-6.1363
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr15	64143850	64143867	protein_coding	Asap1	intron	ENSMUSG00000022377	ProperStrand	29	1	-5.8800
chr13	9833553	9833677	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr16	38348955	38348978	protein_coding-noncoding	Cox17	utr5	ENSMUSG00000046516	NonProperStrand	2	2	-inf
chr18	74785354	74786835	protein_coding	Myo5b	exon	ENSMUSG00000025885	ProperStrand	28	chr2	144087414	144087463	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-8.0698
chr4	33334947	33335037	protein_coding	Pnrc1	exon	ENSMUSG00000040128	ProperStrand	27	chr16	23110916	23110996	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.1875
chr9	54768317	54768333	protein_coding	Agphd1	exon	ENSMUSG00000035878	NonProperStrand	19	chr18	33954875	33954947	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-9.3962
chr17	69737986	69738002	protein_coding	Zfp161	utr3	ENSMUSG00000049672	NonProperStrand	45	chr1	162965980	162965999	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-4.1425
chr8	126013732	126013797	protein_coding	Afg3l1	exon	ENSMUSG00000031967	ProperStrand	29	chr11	97697969	97697988	protein_coding	Lasp1	utr3	ENSMUSG00000038366	ProperStrand	65	1	-14.6345
chr5	73563222	73563238	protein_coding	Fryl	intron	ENSMUSG00000070733	ProperStrand	173	chr16	56035864	56035918	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	1	-6.8368
chr1	182745764	182745781	antisense	Gm16067	.	ENSMUSG00000073485	ProperStrand	25	chr14	25312664	25312688	protein_coding	Rps24	exon	ENSMUSG00000025290	ProperStrand	110	1	-13.8708
chr12	110888846	110888914	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr9	78326909	78327094	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-2.0390
chr9	106386190	106386301	protein_coding	Rrp9	exon	ENSMUSG00000041506	ProperStrand	32	chr10	110918639	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-4.6358
chr14	40289078	40289095	LTR	MTEa	MaLR	chr14MTEa40289022	ProperStrand	21	chr5	108336376	108336408	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-6.9568
chr17	48549062	48549078	protein_coding	Nfya	utr5	ENSMUSG00000023994	NonProperStrand	2	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-15.2057
chr13	45016072	45016135	protein_coding	Jarid2	utr3	ENSMUSG00000038518	ProperStrand	372	chr5	92485085	92485119	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	1	-5.1385
chr8	72552555	72552610	protein_coding	Mau2	exon	ENSMUSG00000031858	ProperStrand	17	chr16	23110968	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-5.4260
chr4	131826009	131826099	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	chr11	69483143	69483269	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	7	-3.2550
chr8	36028209	36028227	protein_coding	Tnks	exon	ENSMUSG00000031529	ProperStrand	37	chr18	33954849	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-4.4152
chr11	102170718	102170763	protein_coding	Ubtf	exon	ENSMUSG00000020923	ProperStrand	66	chr11	97642952	97643036	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.3105
chr2	164521970	164521987	SINE	B4A	B4	chr2B4A164521909	ProperStrand	41	chr8	98298578	98298613	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	1	-10.7577
chr16	33014455	33014531	protein_coding	Lrch3	utr3	ENSMUSG00000022801	ProperStrand	9	chr1	93397392	93397482	protein_coding	Traf3ip1	exon	ENSMUSG00000034292	ProperStrand	4	1	-19.7249
chr9	108846191	108846753	protein_coding	Uqcrc1	exon	ENSMUSG00000025651	ProperStrand	43	chr4	131908236	131908284	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.9253
chr15	96202459	96202559	protein_coding	Arid2	exon	ENSMUSG00000033237	ProperStrand	34	chr1	162965557	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	5	-17.5511
chr15	70427765	70427855	LINE	Lx6	L1	chr15Lx670427521	NonProperStrand	1	chr3	36986469	36986549	protein_coding	Adad1	intron	ENSMUSG00000027719	ProperStrand	1	1	-inf
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr4	46476767	46481460	protein_coding	Anp32b	exon	ENSMUSG00000028333	ProperStrand	229	1	-6.1806
chr16	20689303	20689403	protein_coding	Eif4g1	exon	ENSMUSG00000045983	ProperStrand	199	chr9	15118358	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-1.4609
chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	chr11	68886974	68887037	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-0.7475
chr8	109374262	109374320	protein_coding	Tmco7	utr3	ENSMUSG00000041949	ProperStrand	30	chr9	15123947	15123972	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	NonProperStrand	100	1	-13.6951
chr7	147130018	147130068	protein_coding	Utf1	exon	ENSMUSG00000047751	ProperStrand	67	chr7	82600670	82600686	protein_coding	Akap13	intron	ENSMUSG00000066406	ProperStrand	80	1	-12.5126
chr11	84042523	84045163	protein_coding	Acaca	exon	ENSMUSG00000020532	ProperStrand	100	chr4	21606097	21606114	protein_coding	Prdm13	exon	ENSMUSG00000040478	ProperStrand	51	1	-12.6160
chr12	32890784	32890800	protein_coding	Pik3cg	exon	ENSMUSG00000020573	ProperStrand	12	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-10.5024
chr11	59778161	59778177	protein_coding	Rasd1	exon	ENSMUSG00000049892	NonProperStrand	49	chr2	130101241	130101279	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-6.9934
chr4	124684899	124684915	protein_coding	Rspo1	exon	ENSMUSG00000028871	NonProperStrand	4	chr2	119277090	119279830	protein_coding	Ino80	exon	ENSMUSG00000034154	ProperStrand	54	1	-18.9580
chrX	97789447	97789463	protein_coding	P2ry4	exon	ENSMUSG00000044359	NonProperStrand	5	chr1	162967782	162967806	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	1	-15.4184
chr4	131866246	131866292	lincRNA	Snhg12	exon	ENSMUSG00000086290	NonProperStrand	1	chr18	35716777	35716867	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	NonProperStrand	45	1	-inf
chr10	31062596	31062696	protein_coding	Tpd52l1	intron	ENSMUSG00000000296	ProperStrand	4	chr11	97642952	97643002	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-7.8635
chr17	35379653	35379699	protein_coding	Ddx39b	utr5	ENSMUSG00000019432	ProperStrand	119	chr16	23111778	23111822	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-0.9346
chr11	97023986	97028880	protein_coding	Kpnb1	exon	ENSMUSG00000001440	ProperStrand	197	chr9	120039533	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-2.5747
chr15	12740485	12740563	protein_coding	6030458C11Rik	exon	ENSMUSG00000022195	ProperStrand	12	chr18	35714247	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-6.5851
chr9	113650645	113650664	protein_coding	Clasp2	utr5	ENSMUSG00000033392	NonProperStrand	20	chr16	23110828	23110875	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.6223
chr15	76541224	76541240	protein_coding	Lrrc14	utr5	ENSMUSG00000033728	ProperStrand	52	chr10	80642166	80642189	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-6.3817
chr2	32563527	32563545	protein_coding	Cdk9	exon	ENSMUSG00000009555	NonProperStrand	49	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-7.3864
chr6	122265005	122265041	protein_coding-noncoding	M6pr	utr5	ENSMUSG00000007458	ProperStrand	2	chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	1	-17.5776
chr5	129526437	129528410	protein_coding	Ran	exon	ENSMUSG00000029430	ProperStrand	82	chr16	23110963	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-2.1115
chr11	87269915	87270004	protein_coding	Tex14	intron	ENSMUSG00000010342	ProperStrand	41	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-7.9954
chr8	107697939	107698021	protein_coding	Cbfb	intron	ENSMUSG00000031885	ProperStrand	21	chr1	162965551	162965569	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.2774
chr2	165507244	165507261	protein_coding	Eya2	intron	ENSMUSG00000017897	ProperStrand	6	chr6	91708419	91708454	protein_coding	Slc6a6	utr3	ENSMUSG00000030096	ProperStrand	206	1	-15.6033
chr11	119960542	119961557	protein_coding	1810043H04Rik	utr3	ENSMUSG00000078572	ProperStrand	12	chr4	131865933	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.6729
chr9	50667016	50669640	protein_coding	Ppp2r1b	exon	ENSMUSG00000032058	ProperStrand	22	chrX	34622907	34622990	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-5.0729
chr8	46095770	46095870	protein_coding	Fat1	exon	ENSMUSG00000070047	ProperStrand	306	chr17	35088957	35089018	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-2.8041
chr17	80429672	80429749	protein_coding	Hnrpll	utr3	ENSMUSG00000024095	ProperStrand	27	chr12	88224241	88224293	protein_coding	6430527G18Rik	exon	ENSMUSG00000034168	ProperStrand	46	7	-inf
chrX	90540039	90540055	protein_coding	Arx	exon	ENSMUSG00000035277	ProperStrand	5	chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	1	-14.3502
chr2	158182156	158182291	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	chr19	8799581	8799644	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	3	-0.9024
chr1	192777775	192777792	protein_coding	Vash2	intron	ENSMUSG00000037568	ProperStrand	34	chr1	88247839	88247863	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-6.2127
chr2	91436245	91436335	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	chr11	51551273	51551424	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	2	-3.9308
chr12	70413651	70415416	protein_coding	Nemf	exon	ENSMUSG00000020982	ProperStrand	77	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-8.4271
chr8	4260143	4260209	protein_coding	Timm44	exon	ENSMUSG00000002949	ProperStrand	63	chr9	120038564	120038654	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	5	-13.1393
chr4	117889747	117893150	protein_coding	Ptprf	exon	ENSMUSG00000033295	ProperStrand	337	chr10	126497185	126497202	protein_coding	March9	utr5	ENSMUSG00000040502	ProperStrand	25	1	-11.6265
chr4	118808365	118808397	protein_coding	Slc2a1	exon	ENSMUSG00000028645	ProperStrand	361	chr3	99944203	99945503	protein_coding	Wdr3	exon	ENSMUSG00000033285	ProperStrand	30	2	-17.5923
chrX	71517011	71517152	protein_coding	Rpl10	exon	ENSMUSG00000008682	ProperStrand	71	chr15	79908929	79908953	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	4	-15.9064
chr10	62303010	62350144	protein_coding	Tet1	exon	ENSMUSG00000047146	ProperStrand	286	chr1	162967493	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	6	-7.8388
chr14	63287586	63287612	protein_coding	Serpine3	intron	ENSMUSG00000091155	ProperStrand	210	chr17	24856620	24856739	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	3	-9.7168
chr8	87223594	87223610	protein_coding	Trmt1	exon	ENSMUSG00000001909	NonProperStrand	60	chr11	62416578	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	4	-15.9906
chr2	28624496	28624586	protein_coding	Ak8	intron	ENSMUSG00000026807	ProperStrand	12	chr2	28879592	28879682	protein_coding	1700101E01Rik	intron	ENSMUSG00000079502	ProperStrand	5	1	-19.3297
chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	chr2	91436270	91436301	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-3.7925
chr17	47075606	47075622	protein_coding	Ubr2	exon	ENSMUSG00000023977	ProperStrand	172	chrX	70962862	70962878	protein_coding	Abcd1	exon	ENSMUSG00000031378	ProperStrand	12	1	-14.4816
chr13	53285957	53285978	protein_coding	Ror2	intron	ENSMUSG00000021464	ProperStrand	46	chr11	6520321	6520423	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	3	-18.3187
chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	chr1	162968441	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-2.5070
chr4	124729804	124729821	protein_coding	Gnl2	exon	ENSMUSG00000028869	ProperStrand	23	chr16	57391626	57391726	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	1	-12.2473
chr11	60370927	60370943	protein_coding	Alkbh5	utr3	ENSMUSG00000042650	ProperStrand	203	chr2	158182180	158182291	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-2.7418
chr1	84728232	84728307	protein_coding	Trip12	exon	ENSMUSG00000026219	ProperStrand	248	chr1	162967516	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-2.2465
chr10	75978481	75978513	protein_coding	Mcm3ap	utr3	ENSMUSG00000001150	ProperStrand	95	chr7	52381722	52381761	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-6.6615
chr17	25520052	25520069	protein_coding	Cacna1h	exon	ENSMUSG00000024112	ProperStrand	30	chr2	158185577	158185654	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-7.8705
chr1	191476564	191476620	protein_coding	Cenpf	exon	ENSMUSG00000026605	ProperStrand	44	chr8	73419681	73419781	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.6992
chr2	26493406	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr2	135820133	135824418	protein_coding	Plcb4	exon	ENSMUSG00000039943	NonProperStrand	57	2	-10.2076
chr19	5714870	5714970	protein_coding	Ehbp1l1	intron	ENSMUSG00000024937	ProperStrand	75	chr4	53873604	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	1	-8.5980
chr9	110034621	110034711	protein_coding	Smarcc1	exon	ENSMUSG00000032481	ProperStrand	108	chr19	8798493	8798546	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	24	-19.4985
chr18	37911790	37911806	protein_coding	Pcdhga9	intron	ENSMUSG00000023036	ProperStrand	245	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	2	-5.4430
chr1	75484537	75484553	protein_coding	Obsl1	exon	ENSMUSG00000026211	NonProperStrand	192	chr4	128688616	128688659	protein_coding	Ak2	utr3	ENSMUSG00000028792	ProperStrand	43	1	-11.6523
chr17	35138497	35138587	protein_coding	Vars	exon	ENSMUSG00000007029	ProperStrand	121	chr11	97642674	97642754	protein_coding	Rpl23	exon	ENSMUSG00000071415	ProperStrand	920	1	-6.4644
chr4	131908366	131908468	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr15	82725622	82725638	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	1	-2.7037
chr19	44368815	44379000	protein_coding	Scd2	utr5	ENSMUSG00000025203	ProperStrand	219	chr7	29136525	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	4	-3.1807
chr19	7653450	7653506	protein_coding	Pla2g16	exon	ENSMUSG00000060675	ProperStrand	3	chr2	32818904	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-11.7908
chr2	165640938	165641028	protein_coding	Zmynd8	intron	ENSMUSG00000039671	NonProperStrand	23	chr19	8800355	8800434	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-5.3675
chr19	47205229	47205260	protein_coding	Pdcd11	exon	ENSMUSG00000025047	ProperStrand	137	chr11	68887037	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	3	-6.8802
chr1	88252836	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	chr9	15118245	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	8	-0.9655
chr19	3904233	3904250	protein_coding	Tcirg1	exon	ENSMUSG00000001750	ProperStrand	77	chr19	8963118	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-3.4106
chr1	162984102	162984192	protein_coding	Dars2	exon	ENSMUSG00000026709	ProperStrand	14	chr9	15119643	15119723	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.3767
chr13	55733515	55733532	protein_coding	Caml	utr3	ENSMUSG00000021501	NonProperStrand	2	chr8	87806231	87806303	protein_coding	Vps35	intron	ENSMUSG00000031696	ProperStrand	27	1	-21.0126
chr13	69762042	69762132	protein_coding	Nsun2	exon	ENSMUSG00000021595	ProperStrand	110	chrX	34622908	34622988	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-2.1245
chr16	17257798	17257814	lincRNA	Gm17625	exon	ENSMUSG00000091106	ProperStrand	8	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.4974
chr6	55027610	55027633	protein_coding	Gars	exon	ENSMUSG00000029777	ProperStrand	71	chr5	108336363	108336490	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-4.5573
chr8	63391413	63391512	protein_coding	Clcn3	utr3	ENSMUSG00000004319	ProperStrand	93	chr6	124951595	124951612	protein_coding	C530028O21Rik	exon	ENSMUSG00000030329	ProperStrand	12	1	-15.7188
chr17	35971224	35971284	protein_coding	Tubb5	utr3	ENSMUSG00000001525	ProperStrand	624	chr11	62416951	62416976	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-1.7744
chr10	127521199	127521272	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	chrX	34622906	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	3	-0.9811
chr3	153573527	153573596	snoRNA	ENSMUSG00000064731_Snord45b	.	ENSMUSG00000064731	ProperStrand	205	chr11	69481332	69481433	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	5	-7.0433
chr13	90238609	90238724	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	chr12	106269287	106269403	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	2	-1.1542
chr11	116712437	116712475	protein_coding-noncoding	Srsf2	utr3	ENSMUSG00000034120	ProperStrand	14	chr10	6450631	6450649	protein_coding	Plekhg1	intron	ENSMUSG00000040624	NonProperStrand	75	1	-15.8425
chr16	23110986	23111010	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr9	59516451	59516783	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	1	-3.0658
chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	chr18	73693166	73693187	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-0.8013
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chrX	83547356	83547372	protein_coding	Mageb4	intron	ENSMUSG00000035427	NonProperStrand	191	1	-3.6858
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	106684003	106684019	protein_coding	Smurf2	exon	ENSMUSG00000018363	ProperStrand	79	1	-3.9419
chr7	148807178	148809583	protein_coding	Ap2a2	exon	ENSMUSG00000002957	ProperStrand	76	chr11	63885336	63887052	protein_coding	Cox10	exon	ENSMUSG00000042148	NonProperStrand	187	1	-10.5577
chr7	108080058	108080075	protein_coding	Arhgef17	exon	ENSMUSG00000032875	ProperStrand	33	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-12.8926
chr9	8004472	8004506	protein_coding	Yap1	utr5	ENSMUSG00000053110	ProperStrand	68	chr15	79908952	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-5.2287
chr11	106115938	106116101	protein_coding	Ftsj3	exon	ENSMUSG00000020706	ProperStrand	64	chr7	117166772	117166858	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	5	-18.3320
chr11	108783076	108783093	protein_coding	Axin2	utr5	ENSMUSG00000000142	NonProperStrand	81	chr12	17552965	17552995	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-4.5114
chr15	38867969	38867986	protein_coding	Fzd6	exon	ENSMUSG00000022297	ProperStrand	15	chr10	23505190	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-6.1124
chr8	83505750	83505766	protein_coding	Usp38	exon	ENSMUSG00000038250	ProperStrand	26	chr12	17552948	17553071	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-6.7405
chr18	36958192	36958282	protein_coding	Zmat2	utr3	ENSMUSG00000001383	ProperStrand	25	chr11	6520360	6520440	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	1	-9.4805
chr9	49247308	49247326	protein_coding	Ttc12	intron	ENSMUSG00000040219	NonProperStrand	3	chr16	23111448	23111497	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-6.9982
chr11	97490846	97490914	protein_coding	E130012A19Rik	utr5	ENSMUSG00000043439	ProperStrand	83	chr19	5666341	5666515	protein_coding	Pcnxl3	exon	ENSMUSG00000054874	ProperStrand	96	1	-11.7165
chr15	73412345	73412376	protein_coding	Slc45a4	exon	ENSMUSG00000079020	ProperStrand	127	chr9	15119665	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	6	-9.9545
chr4	43505656	43505723	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr3	88603799	88603899	pseudogene	5830417I10Rik	.	ENSMUSG00000078684	ProperStrand	68	1	-2.8476
chr4	131908236	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	chr15	98356774	98356913	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	19	-2.0145
chr14	99618365	99618455	protein_coding	Pibf1	intron	ENSMUSG00000022064	ProperStrand	32	chr12	89264658	89264738	protein_coding	Gm8607	intron	ENSMUSG00000092138	ProperStrand	1	1	-inf
chr9	108001165	108001182	protein_coding	Bsn	utr3	ENSMUSG00000032589	NonProperStrand	20	chr5	97528628	97528678	protein_coding	Paqr3	exon	ENSMUSG00000055725	ProperStrand	10	1	-18.7257
chr9	24307354	24307371	protein_coding	Dpy19l1	exon	ENSMUSG00000043067	ProperStrand	24	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-10.0076
chr11	101466251	101466351	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	chr19	8798746	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	2	-2.0431
chr16	33625246	33646649	protein_coding	Slc12a8	exon	ENSMUSG00000035506	ProperStrand	52	chr5	108334210	108334326	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-5.0970
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr1	162966812	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	2	-1.5730
chr19	18787852	18787935	protein_coding	D030056L22Rik	exon	ENSMUSG00000047044	NonProperStrand	1	chr11	55138065	55138083	protein_coding	Fat2	intron	ENSMUSG00000055333	ProperStrand	39	1	-inf
chr7	53202822	53203005	protein_coding	Ccdc114	exon	ENSMUSG00000040189	ProperStrand	2	chr16	23110536	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-9.6327
chr19	8963032	8963048	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	chr12	110874223	110874249	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	1	-6.8381
chr11	83085122	83085192	snRNA	ENSMUSG00000064856_U2	.	ENSMUSG00000064856	ProperStrand	34	chr4	131865855	131865935	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	6	-15.5162
chr14	40289078	40289095	LTR	MTEa	MaLR	chr14MTEa40289022	ProperStrand	21	chr16	23111385	23111418	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.9586
chr6	55013199	55015541	protein_coding	Gars	exon	ENSMUSG00000029777	ProperStrand	71	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-2.6383
chr5	123980682	123980733	protein_coding	Vps33a	utr3	ENSMUSG00000029434	ProperStrand	16	chr7	29136541	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.8105
chr4	43505755	43505845	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr2	29029227	29032470	protein_coding	Setx	exon	ENSMUSG00000043535	ProperStrand	187	1	-1.2404
chr13	54569867	54569886	protein_coding	Thoc3	intron	ENSMUSG00000025872	ProperStrand	24	chr7	140273530	140273613	protein_coding	Fgfr2	utr5	ENSMUSG00000030849	ProperStrand	100	1	-14.1458
chr5	28398258	28400099	protein_coding	Insig1	exon	ENSMUSG00000045294	ProperStrand	35	chr8	73419649	73419729	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.1302
chr6	83052107	83052123	protein_coding	Ccdc142	exon	ENSMUSG00000079511	NonProperStrand	2	chr1	162965531	162965570	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-10.5602
chr1	157160006	157160023	protein_coding	Xpr1	exon	ENSMUSG00000026469	ProperStrand	15	chr9	120037932	120037990	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-7.4601
chr2	90235294	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	18764040	18764056	protein_coding	Pip4k2a	utr3	ENSMUSG00000026737	NonProperStrand	15	1	-7.2074
chr6	46902552	46902575	protein_coding	Cntnap2	intron	ENSMUSG00000039419	NonProperStrand	283	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-1.0736
chr13	38289097	38289200	protein_coding	Dsp	exon	ENSMUSG00000054889	ProperStrand	23	chr16	23111777	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.5778
chr8	67908604	67908694	SINE	B1_Mur1	Alu	chr8B1_Mur167908582	ProperStrand	1	chr8	67908457	67908537	SINE	B4A	B4	chr8B4A67908345	ProperStrand	1	1	-inf
chr19	5798371	5798471	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr4	116826700	116826761	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-1.5197
chr13	59738728	59739730	protein_coding	Golm1	exon	ENSMUSG00000021556	ProperStrand	27	chr16	3948964	3948980	protein_coding	Nlrc3	exon	ENSMUSG00000049871	ProperStrand	5	1	-19.7151
chr6	124664024	124664068	protein_coding	Phb2	exon	ENSMUSG00000004264	ProperStrand	43	chr8	129468745	129468800	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	2	-8.3418
chr1	162966383	162966439	non_coding	Gas5	.	ENSMUSG00000053332	ProperStrand	144	chr3	85904468	85904558	snoRNA	ENSMUSG00000065847_SNORA32	.	ENSMUSG00000065847	ProperStrand	40	1	-12.3743
chr5	134615249	134615266	protein_coding	Gatsl2	utr3	ENSMUSG00000015944	NonProperStrand	6	chr4	116862547	116862663	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	4	-19.0042
chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	chr9	51895136	51895200	protein_coding	Rdx	utr3	ENSMUSG00000032050	ProperStrand	60	1	-8.5042
chr4	139482849	139482865	lincRNA	4933427I22Rik	exon	ENSMUSG00000085928	ProperStrand	62	chr15	79913286	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-3.5317
chr16	11689130	11689149	antisense	Gm4279	.	ENSMUSG00000085732	ProperStrand	1	chr15	79908931	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-inf
chr9	13623920	13623949	protein_coding	Cep57	intron	ENSMUSG00000031922	ProperStrand	8	chr2	144091730	144091830	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	ProperStrand	549	1	-13.0182
chr3	153575090	153575122	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	chr17	46915217	46915391	protein_coding	Rpl7l1	exon	ENSMUSG00000063888	ProperStrand	37	1	-9.4675
chr5	114401918	114402008	protein_coding	Ssh1	exon	ENSMUSG00000042121	ProperStrand	8	chr7	29136552	29136642	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-6.2203
chr13	68759738	68764669	protein_coding	Adcy2	exon	ENSMUSG00000021536	ProperStrand	237	chr14	52829542	52829569	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-5.4887
chr3	85448965	85456213	protein_coding	Pet112l	exon	ENSMUSG00000028085	ProperStrand	81	chr17	13115667	13115698	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	1	-6.9367
chr10	79501286	79502335	protein_coding	Polr2e	exon	ENSMUSG00000004667	ProperStrand	37	chr6	115757992	115758082	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-6.4252
chr14	76273599	76273679	LTR	MTE-int	MaLR	chr14MTE-int76273484	NonProperStrand	1	chr14	76273725	76273815	SINE	B1_Mur3	Alu	chr14B1_Mur376273732	NonProperStrand	1	1	-inf
chr11	53100371	53100452	protein_coding	Hspa4	exon	ENSMUSG00000020361	ProperStrand	69	chr2	26768410	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-5.3287
chr2	30205862	30205879	protein_coding	Sh3glb2	exon	ENSMUSG00000026860	ProperStrand	8	chr3	153575127	153575168	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	1	-12.6294
chr1	137293242	137293261	protein_coding	Ipo9	intron	ENSMUSG00000041879	ProperStrand	53	chr3	68889026	68889136	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-3.4837
chr14	64562712	64562729	protein_coding	Sox7	exon	ENSMUSG00000063060	ProperStrand	7	chr3	68889053	68889145	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	7	-inf
chr18	63238393	63238409	protein_coding	Fam38b	exon	ENSMUSG00000041482	NonProperStrand	50	chr10	23505152	23505267	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-8.2365
chr13	9833551	9833656	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr7	13516161	13516201	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	2	-1.9937
chr3	94764403	94764503	antisense	B230398E01Rik	.	ENSMUSG00000087660	ProperStrand	1	chr10	127527217	127527269	protein_coding	Atp5b	utr3	ENSMUSG00000025393	NonProperStrand	9	1	-inf
chr7	52309977	52309993	protein_coding	Prrg2	exon	ENSMUSG00000007837	NonProperStrand	281	chr4	88367809	88367825	protein_coding	Klhl9	exon	ENSMUSG00000070923	ProperStrand	7	1	-14.6494
mmu-miR-1949	0	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr5	121655031	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	4	-1.5807
chr12	72941179	72941201	protein_coding	Daam1	intron	ENSMUSG00000034574	NonProperStrand	15	chr9	120039556	120039622	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-5.9962
chr18	33361414	33361446	protein_coding	Stard4	utr3	ENSMUSG00000024378	ProperStrand	21	chr9	15118334	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-5.4806
chr15	79624860	79624877	protein_coding	Npcd	exon	ENSMUSG00000089837	ProperStrand	11	chr11	62418013	62418044	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-8.9791
chr17	28735930	28736498	protein_coding	Srpk1	exon	ENSMUSG00000004865	ProperStrand	61	chr8	73419657	73419675	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.1005
chr16	38369597	38369614	protein_coding	Popdc2	exon	ENSMUSG00000022803	ProperStrand	19	chr10	23505149	23505253	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-5.4097
chr9	63066908	63066926	protein_coding	Map2k5	intron	ENSMUSG00000058444	NonProperStrand	79	chr7	29136525	29136575	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.9141
chr9	44143004	44143063	protein_coding	H2afx	exon	ENSMUSG00000049932	ProperStrand	137	chr4	131866157	131866247	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-2.2087
chr10	20080843	20080860	protein_coding	Fam54a	utr3	ENSMUSG00000019992	ProperStrand	232	chr17	13112484	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	6	-12.8515
chr3	11580450	11580467	LINE	Lx3A	L1	chr3Lx3A11580299	ProperStrand	53	chr7	117189864	117190015	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.5602
chr19	9042821	9051917	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	chr9	15119646	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	9	-6.8432
chr5	34234244	34234262	protein_coding	Whsc1	utr5	ENSMUSG00000057406	ProperStrand	409	chrX	70327086	70327136	protein_coding	Xlr4a	intron	ENSMUSG00000079845	ProperStrand	1	1	-inf
chr16	74597025	74597043	LINE	Lx2B	L1	chr16Lx2B74596211	ProperStrand	1	chr4	131908363	131908462	lincRNA	Gm17300	exon	ENSMUSG00000091021	ProperStrand	109	1	-inf
chr19	3611998	3612038	protein_coding	Lrp5	intron	ENSMUSG00000024913	ProperStrand	145	chr10	75322914	75322978	protein_coding	Mif	utr5	ENSMUSG00000033307	ProperStrand	146	2	-15.4016
chr12	58691976	58691992	antisense	4921518K17Rik	.	ENSMUSG00000085851	ProperStrand	75	chr7	52381722	52381758	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-7.1299
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr2	181316563	181316579	protein_coding	Uckl1	exon	ENSMUSG00000089917	ProperStrand	142	2	-9.8804
chr2	55712794	55712874	LINE	L1Md_T	L1	chr2L1Md_T55711771	NonProperStrand	1	chr2	54928563	54928652	protein_coding	Galnt13	intron	ENSMUSG00000060988	NonProperStrand	9	1	-inf
chr3	19528533	19528550	protein_coding	1700064H15Rik	exon	ENSMUSG00000082766	NonProperStrand	78	chr1	162966813	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-5.7429
chr8	72437009	72437064	protein_coding	Gatad2a	exon	ENSMUSG00000036180	ProperStrand	112	chr8	32260335	32260395	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	8	-19.4047
chr10	60692417	60692433	protein_coding	Adamts14	exon	ENSMUSG00000059901	NonProperStrand	127	chr5	108334195	108334238	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-3.4092
chr2	35892152	35895238	protein_coding	Ndufa8	exon	ENSMUSG00000026895	ProperStrand	5	chr16	23111374	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-14.5684
chr15	76176093	76176112	protein_coding	Cyc1	exon	ENSMUSG00000022551	ProperStrand	47	chr2	112208150	112208168	protein_coding	Tmem85	utr5	ENSMUSG00000027131	ProperStrand	19	1	-16.1828
chr6	71129048	71129065	SINE	B4A	B4	chr6B4A71128898	NonProperStrand	1	chr4	120819527	120819582	protein_coding	Rlf	exon	ENSMUSG00000049878	ProperStrand	58	1	-inf
chr13	107697813	107697893	protein_coding	Ipo11	intron	ENSMUSG00000042590	ProperStrand	120	chr6	125136376	125136466	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	1	-5.0853
chr11	80080114	80080131	protein_coding	Rhot1	utr3	ENSMUSG00000017686	NonProperStrand	48	chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	1	-11.0682
chr8	13014869	13014885	protein_coding	Mcf2l	exon	ENSMUSG00000031442	NonProperStrand	35	chr2	181316563	181316579	protein_coding	Uckl1	exon	ENSMUSG00000089917	ProperStrand	142	1	-12.6735
chr9	55393367	55393383	protein_coding	Isl2	utr3	ENSMUSG00000032318	NonProperStrand	1	chr19	8963027	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-inf
chr19	4195240	4195330	protein_coding	Ppp1ca	utr3	ENSMUSG00000040385	ProperStrand	40	chr9	58547119	58547136	protein_coding	2410076I21Rik	intron	ENSMUSG00000074269	ProperStrand	91	1	-13.2964
chr2	121949510	121949526	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	chr10	110918555	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-1.0337
chr4	126726977	126727026	protein_coding	Zmym1	exon	ENSMUSG00000043872	ProperStrand	11	chr8	32260335	32260385	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	4	-19.9503
chr4	98404198	98404273	protein_coding	L1td1	exon	ENSMUSG00000087166	ProperStrand	43	chr12	17552995	17553072	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-5.7404
chr19	55975198	55975216	protein_coding	Tcf7l2	intron	ENSMUSG00000024985	NonProperStrand	22	chr11	62416604	62416637	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-11.5475
chr1	72895665	72895765	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	chr12	55797883	55797940	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	1	-3.9757
chr4	147475799	147475815	protein_coding	2610109H07Rik	utr3	ENSMUSG00000029005	ProperStrand	6	chr4	131865856	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-10.2022
chr19	10785785	10787055	protein_coding	Vps37c	exon	ENSMUSG00000048832	ProperStrand	9	chr10	23505152	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-15.3397
chr2	134818629	134818651	protein_coding	Plcb1	intron	ENSMUSG00000051177	NonProperStrand	10	chr10	23505148	23505238	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.3364
chr14	33005109	33005238	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	chr18	35100888	35100917	snoRNA	ENSMUSG00000089239_SNORD63	.	ENSMUSG00000089239	ProperStrand	18	8	-19.0389
chr12	58691976	58691992	antisense	4921518K17Rik	.	ENSMUSG00000085851	ProperStrand	75	chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-6.0141
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr4	140121137	140121153	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	1	-5.4176
chr2	4829164	4829180	protein_coding	Sephs1	utr3	ENSMUSG00000026662	NonProperStrand	271	chr1	162965531	162965554	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-0.9123
chr7	4698417	4698497	protein_coding	Suv420h2	utr3	ENSMUSG00000059851	ProperStrand	60	chr7	117189955	117190062	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	4	-11.2690
chr2	144087323	144087396	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	chr2	144091715	144091815	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	ProperStrand	549	1	-2.3948
chr8	81569740	81569758	protein_coding	Zfp827	intron	ENSMUSG00000071064	NonProperStrand	28	chr16	23110470	23110578	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.8373
chr9	78023109	78023242	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr18	35716696	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	30	-2.2699
chrX	122987920	122988010	LINE	L1Md_T	L1	chrXL1Md_T122981671	ProperStrand	1	chr18	34526623	34526713	protein_coding	Reep5	intron	ENSMUSG00000005873	NonProperStrand	1	1	-inf
chr9	64024953	64024998	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	chr8	73419661	73419761	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-0.6983
chr7	71840799	71840833	protein_coding	Apba2	exon	ENSMUSG00000030519	ProperStrand	7	chr6	91937130	91937146	protein_coding	Fgd5	exon	ENSMUSG00000034037	ProperStrand	38	1	-18.6519
chr11	59233614	59233665	protein_coding	Snap47	intron	ENSMUSG00000009894	ProperStrand	19	chr15	34370581	34370681	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	6	-20.9435
chr4	11100753	11100854	protein_coding	Trp53inp1	utr3	ENSMUSG00000028211	ProperStrand	35	chr16	23111437	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	9	-19.8262
chr15	79908956	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	chr8	34802361	34802416	snoRNA	ENSMUSG00000088856_SNORA48	.	ENSMUSG00000088856	ProperStrand	236	3	-7.4227
chr4	134726780	134726797	protein_coding	Runx3	intron	ENSMUSG00000070691	ProperStrand	17	chr16	23110828	23110892	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.8783
chr5	144268342	144268984	protein_coding	Rac1	exon	ENSMUSG00000001847	ProperStrand	32	chr11	6428131	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.3666
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr9	114373228	114373290	protein_coding	Glb1	exon	ENSMUSG00000045594	ProperStrand	67	1	-6.8084
chr2	26493391	26493518	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr9	29701006	29701026	protein_coding	Ntm	intron	ENSMUSG00000059974	ProperStrand	49	1	-6.5955
chr2	158204249	158204268	protein_coding-noncoding	Snhg11	utr5	ENSMUSG00000044349	ProperStrand	2	chr4	131908689	131908792	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-inf
chr9	77286965	77287052	protein_coding	Lrrc1	intron	ENSMUSG00000032352	ProperStrand	10	chr12	17552996	17553086	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	2	-13.9618
chr8	125877761	125877778	protein_coding	Spire2	intron	ENSMUSG00000010154	NonProperStrand	3	chrX	84483692	84483716	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-14.6302
chr5	132213625	132213642	protein_coding	Auts2	intron	ENSMUSG00000029673	ProperStrand	71	chr8	32260379	32260432	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-4.3085
chr11	21459724	21459781	protein_coding	Mdh1	exon	ENSMUSG00000020321	ProperStrand	16	chr16	23111770	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-10.5086
chr2	13496442	13500244	protein_coding	Vim	exon	ENSMUSG00000026728	ProperStrand	33	chr11	97642994	97643094	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-6.0430
chr19	5272987	5273004	protein_coding	Pacs1	utr5	ENSMUSG00000024855	ProperStrand	24	chr16	23111447	23111492	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.7195
chr12	55072393	55072409	protein_coding	Npas3	intron	ENSMUSG00000021010	ProperStrand	15	chrX	84483702	84483721	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-11.0623
chr9	56958471	56958509	protein_coding	Sin3a	exon	ENSMUSG00000042557	ProperStrand	108	chr4	3762227	3762293	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	2	-13.2300
chr11	116535953	116535982	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr11	117519916	117520016	protein_coding	Tnrc6c	intron	ENSMUSG00000025571	ProperStrand	51	1	-6.2312
chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	chr1	162968444	162968511	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	3	-4.1620
chr5	123618246	123618336	lincRNA	Gm17627	intron	ENSMUSG00000066418	NonProperStrand	3	chr17	35299559	35299639	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	2	-18.4310
chr11	12154214	12154231	protein_coding	Cobl	exon	ENSMUSG00000020173	ProperStrand	133	chr11	78300852	78300869	protein_coding	Sarm1	exon	ENSMUSG00000050132	NonProperStrand	13	1	-14.8283
chr2	35575800	35575817	protein_coding	Dab2ip	exon	ENSMUSG00000026883	NonProperStrand	58	chr4	131908300	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.4677
chr2	26767604	26767910	protein_coding	Rpl7a	exon	ENSMUSG00000062647	ProperStrand	234	chr2	26767743	26767807	snoRNA	ENSMUSG00000064829_SNORD36	.	ENSMUSG00000064829	ProperStrand	98	1	-9.5997
chr11	86084304	86084357	protein_coding	Med13	utr3	ENSMUSG00000034297	ProperStrand	23	chr10	89512698	89512714	protein_coding	Anks1b	exon	ENSMUSG00000058589	ProperStrand	68	1	-14.9903
chr13	23654018	23654108	protein_coding	Hist1h3e	exon	ENSMUSG00000069273	ProperStrand	30	chr9	40612872	40612905	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	1	-10.9430
chr19	34999238	34999254	protein_coding	Kif20b	exon	ENSMUSG00000024795	NonProperStrand	28	chr11	6428131	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.6242
chr14	78987022	78987038	protein_coding	Dgkh	exon	ENSMUSG00000034731	ProperStrand	29	chr5	121655030	121655086	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.1397
chr4	98400441	98400500	protein_coding	L1td1	exon	ENSMUSG00000087166	ProperStrand	43	chr16	18240811	18240911	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	1	-9.7957
chr16	5256015	5256031	protein_coding	Fam86	utr5	ENSMUSG00000022544	ProperStrand	231	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-5.9213
chr7	101143794	101143812	LINE	Lx5	L1	chr7Lx5101143426	NonProperStrand	12	chr16	59555214	59555230	protein_coding	Crybg3	utr5	ENSMUSG00000022723	ProperStrand	18	1	-18.4539
chr10	127565876	127565973	protein_coding	Baz2a	utr3	ENSMUSG00000040054	ProperStrand	274	chr1	93320500	93320517	protein_coding	Per2	exon	ENSMUSG00000055866	NonProperStrand	44	5	-19.6046
chr10	83989570	83989646	protein_coding	Ckap4	utr3	ENSMUSG00000046841	ProperStrand	60	chr4	143027927	143028559	protein_coding	Oog4	exon	ENSMUSG00000047799	NonProperStrand	99	1	-12.3077
chr17	88384526	88384576	protein_coding	Msh6	exon	ENSMUSG00000005370	ProperStrand	150	chr14	52829460	52829487	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-6.3832
chr15	99451367	99451409	protein_coding	Racgap1	utr3	ENSMUSG00000023015	ProperStrand	47	chr11	69483239	69483270	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.8745
chr2	121949510	121949526	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	chr2	158182201	158182291	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-2.2570
chr1	88248613	88248662	snoRNA	ENSMUSG00000064696_SNORD20	.	ENSMUSG00000064696	ProperStrand	89	chr17	24857717	24857807	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-3.0815
chr13	23647314	23647404	protein_coding	Hist1h1d	exon	ENSMUSG00000052565	ProperStrand	78	chr12	106269365	106269445	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-3.6493
chrX	105504079	105504096	LTR	MERVL-int	ERVL	chrXMERVL-int105503972	ProperStrand	7	chr18	35716684	35716743	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-6.2708
chr4	134772731	134772821	protein_coding	Clic4	utr3	ENSMUSG00000037242	ProperStrand	84	chr19	8798740	8798816	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-4.1589
chr12	81744190	81744241	protein_coding	Erh	intron	ENSMUSG00000021131	ProperStrand	20	chr1	162966021	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-5.7229
chr7	28451357	28451444	protein_coding	Map3k10	intron	ENSMUSG00000040390	ProperStrand	14	chr4	131908713	131908803	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.6665
chr12	75041590	75042769	protein_coding	Hif1a	exon	ENSMUSG00000021109	ProperStrand	20	chr8	73419657	73419682	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-5.2171
chr9	123065930	123065946	protein_coding	Clec3b	exon	ENSMUSG00000025784	ProperStrand	58	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-3.3377
chr9	69972993	69973998	protein_coding	Fam81a	exon	ENSMUSG00000032224	ProperStrand	59	chr7	142182211	142190911	protein_coding	Dock1	exon	ENSMUSG00000058325	ProperStrand	22	1	-15.3757
chr16	84727822	84731073	protein_coding	Mrpl39	exon	ENSMUSG00000022889	ProperStrand	32	chr2	63936035	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	4	-18.8911
chr2	120335857	120335874	protein_coding	Zfp106	exon	ENSMUSG00000027288	ProperStrand	199	chr11	62416973	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-3.7418
chr11	102060738	102060754	protein_coding	Hdac5	exon	ENSMUSG00000008855	NonProperStrand	39	chr11	88705754	88705831	protein_coding	Akap1	exon	ENSMUSG00000018428	ProperStrand	45	1	-14.7488
chr6	72907549	72907609	protein_coding	Tmsb10	utr3	ENSMUSG00000079523	ProperStrand	24	chr7	116664809	116664899	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-4.2269
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr5	120889875	120889892	protein_coding	Lhx5	intron	ENSMUSG00000029595	NonProperStrand	106	1	-6.6645
chr4	116827108	116827183	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	chr3	88497881	88497981	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-1.6510
chr10	80644265	80644326	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr7	51505845	51505909	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	4	-7.0191
chr14	78910285	78910375	protein_coding	Akap11	exon	ENSMUSG00000022016	ProperStrand	44	chr4	131908810	131908890	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-3.1061
chr5	106204556	106204646	protein_coding	Lrrc8d	intron	ENSMUSG00000046079	ProperStrand	40	chr16	23110913	23110993	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.7072
chr2	90235314	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	10680038	10703803	protein_coding	Ddb1	utr5	ENSMUSG00000024740	ProperStrand	304	4	-6.4953
chr1	162965977	162965999	non_coding	Gas5	.	ENSMUSG00000053332	ProperStrand	144	chr9	80204234	80204250	protein_coding	Impg1	intron	ENSMUSG00000032343	ProperStrand	7	1	-15.9824
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	61325507	61330213	protein_coding	Col13a1	exon	ENSMUSG00000058806	ProperStrand	120	2	-5.4460
chr3	34550015	34550045	protein_coding	Sox2	exon	ENSMUSG00000074637	ProperStrand	299	chr7	148634765	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-2.4471
chr17	66868873	66868889	protein_coding	Rab12	exon	ENSMUSG00000023460	NonProperStrand	6	chr4	115551015	115551032	protein_coding	Mknk1	utr3	ENSMUSG00000028708	NonProperStrand	4	1	-19.3129
chr19	5719336	5720839	protein_coding	Ehbp1l1	exon	ENSMUSG00000024937	ProperStrand	75	chr4	131865855	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	7	-12.3110
chr1	136645404	136645421	protein_coding	Syt2	utr3	ENSMUSG00000026452	NonProperStrand	13	chr4	155366536	155366553	protein_coding	B3galt6	exon	ENSMUSG00000050796	ProperStrand	40	1	-17.3199
chr7	26472435	26472451	protein_coding	Tgfb1	utr5	ENSMUSG00000002603	NonProperStrand	154	chr14	31827478	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	2	-8.3778
chr2	120360708	120360766	protein_coding	Zfp106	exon	ENSMUSG00000027288	ProperStrand	199	chr7	52381973	52382042	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	2	-7.2883
chr7	4745759	4746059	protein_coding	Rpl28	exon	ENSMUSG00000030432	ProperStrand	220	chr6	145564547	145564563	protein_coding	Tuba3b	utr5	ENSMUSG00000067338	ProperStrand	152	1	-8.8454
chr9	44163209	44163790	protein_coding	Vps11	exon	ENSMUSG00000032127	ProperStrand	19	chr1	162967518	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-5.6883
chr10	80291103	80291219	protein_coding	Oaz1	exon	ENSMUSG00000035242	ProperStrand	49	chr3	97549439	97549483	protein_coding	Pde4dip	intron	ENSMUSG00000038170	ProperStrand	25	1	-15.4893
chr8	13011486	13011576	protein_coding	Mcf2l	exon	ENSMUSG00000031442	ProperStrand	14	chr2	158185538	158185618	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-9.4249
chr16	30514154	30514171	protein_coding	Tmem44	utr3	ENSMUSG00000022537	ProperStrand	217	chr8	73419725	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-1.0877
chr11	6297167	6297267	protein_coding	Zmiz2	exon	ENSMUSG00000041164	ProperStrand	69	chr11	69481333	69481411	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-5.1090
chr4	147808876	147808966	protein_coding	Ubiad1	utr3	ENSMUSG00000047719	ProperStrand	1	chr10	23505187	23505267	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-inf
chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	chr16	11254107	11254242	protein_coding	Gspt1	utr5	ENSMUSG00000062203	ProperStrand	49	1	-9.1697
chr16	11144150	11144250	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr9	15118243	15118321	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	NonProperStrand	11	1	-13.9237
chr9	106332304	106332672	protein_coding	Rpl29	utr5	ENSMUSG00000048758	ProperStrand	45	chr8	98269959	98269977	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-6.1073
chr10	112364423	112364439	protein_coding	Atxn7l3b	utr3	ENSMUSG00000074748	ProperStrand	18	chr1	162967514	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-5.7965
chr4	134877281	134877334	protein_coding	Srrm1	exon	ENSMUSG00000028809	ProperStrand	142	chr2	130101986	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	11	-19.8303
chr2	119742959	119743049	protein_coding	Mga	exon	ENSMUSG00000033943	ProperStrand	180	chr8	129468781	129468861	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-2.4199
chr1	38076179	38076269	protein_coding	Eif5b	exon	ENSMUSG00000026083	ProperStrand	118	chr17	24856656	24856736	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-5.1035
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr4	155000927	155000952	protein_coding	Cdk11b	exon	ENSMUSG00000029062	ProperStrand	92	1	-4.1374
chr19	46836213	46836229	protein_coding	Cnnm2	utr5	ENSMUSG00000064105	NonProperStrand	19	chr4	131908236	131908342	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.3472
chr13	9833577	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr8	124133213	124135234	protein_coding	Zcchc14	exon	ENSMUSG00000061410	ProperStrand	22	1	-6.9384
chr8	97125866	97125889	protein_coding	Rspry1	utr5	ENSMUSG00000050079	ProperStrand	27	chr11	55296195	55296275	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	2	-12.4640
chrX	84483729	84483757	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr2	144087332	144087462	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	2	-3.4072
chr1	174049396	174049496	protein_coding	Copa	exon	ENSMUSG00000026553	ProperStrand	33	chr10	61329160	61330213	protein_coding	Col13a1	exon	ENSMUSG00000058806	ProperStrand	120	1	-13.1293
chr19	15980142	15980195	protein_coding	Psat1	utr3	ENSMUSG00000024640	ProperStrand	33	chr2	158182156	158182213	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-6.1759
chr2	158185577	158185666	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr13	51743665	51743703	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-0.8627
chr16	8847407	8847467	protein_coding	1810013L24Rik	intron	ENSMUSG00000022507	ProperStrand	20	chr16	23111724	23111814	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.8417
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr13	25354120	25354136	protein_coding	Nrsn1	exon	ENSMUSG00000048978	ProperStrand	24	1	-10.4435
chr9	110098843	110100185	protein_coding	Smarcc1	exon	ENSMUSG00000032481	ProperStrand	108	chr18	39078246	39078262	protein_coding	Arhgap26	intron	ENSMUSG00000036452	ProperStrand	46	2	-19.6834
chrX	133275799	133275816	protein_coding	Morf4l2	utr5	ENSMUSG00000031422	ProperStrand	113	chr17	24856708	24856753	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-5.1873
chr11	69731121	69734860	protein_coding	Eif5a	utr5	ENSMUSG00000078812	ProperStrand	164	chr10	23505152	23505248	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-1.0857
chr1	134916292	134916333	protein_coding	Mdm4	intron	ENSMUSG00000054387	NonProperStrand	3	chr17	35299549	35299639	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-11.0713
chr8	87223593	87223610	protein_coding	Trmt1	exon	ENSMUSG00000001909	NonProperStrand	60	chr11	69483136	69483250	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-4.3330
chr5	145638891	145638946	protein_coding	Smurf1	utr3	ENSMUSG00000038780	ProperStrand	45	chr15	60653823	60653840	protein_coding	Fam84b	utr3	ENSMUSG00000072568	NonProperStrand	2	2	-inf
chr7	112533562	112533579	protein_coding	Fam160a2	exon	ENSMUSG00000044465	ProperStrand	85	chr1	24621191	24621256	protein_coding	Gm10925	utr3	ENSMUSG00000090378	ProperStrand	320	3	-19.5170
chr2	156606256	156606272	protein_coding	Myl9	exon	ENSMUSG00000067818	ProperStrand	5	chr4	79650938	79650968	pseudogene	Gm11410	.	ENSMUSG00000083219	ProperStrand	47	1	-19.2340
chr9	96221530	96221573	protein_coding	Tfdp2	utr3	ENSMUSG00000032411	ProperStrand	95	chr9	99483993	99484009	protein_coding	Dbr1	exon	ENSMUSG00000032469	ProperStrand	162	1	-10.3969
chr11	67174202	67174219	protein_coding	Myh13	intron	ENSMUSG00000060180	ProperStrand	145	chr17	35089181	35089229	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-3.7987
chr2	28538370	28538470	protein_coding	Tsc1	intron	ENSMUSG00000026812	ProperStrand	29	chr11	106362340	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-7.2878
chr9	15124255	15124275	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	NonProperStrand	100	chr18	74938045	74938106	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	ProperStrand	1022	1	-6.6338
chr7	29545211	29546625	protein_coding	Nfkbib	exon	ENSMUSG00000030595	ProperStrand	8	chr3	108357255	108357310	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	5	-19.3867
chr19	23216018	23216047	protein_coding	Klf9	utr5	ENSMUSG00000033863	ProperStrand	83	chr19	8963032	8963048	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-9.5041
chr1	74481760	74481777	protein_coding	Vil1	utr3	ENSMUSG00000026175	ProperStrand	68	chr18	35714194	35714291	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-3.2148
chr19	53082307	53082324	protein_coding	Xpnpep1	intron	ENSMUSG00000025027	NonProperStrand	58	chrX	71589885	71589907	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	1	-10.2170
chr9	62644736	62644779	protein_coding	Fem1b	exon	ENSMUSG00000032244	ProperStrand	111	chr11	55296239	55296275	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-4.9791
chr11	6319519	6319570	protein_coding	Ppia	exon	ENSMUSG00000071866	ProperStrand	127	chr10	23505150	23505211	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-1.6424
chr7	17002722	17005511	protein_coding	Zc3h4	exon	ENSMUSG00000059273	ProperStrand	95	chr10	127521200	127521271	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	1	-7.8756
chr3	35653273	35676950	protein_coding	Atp11b	utr5	ENSMUSG00000037400	ProperStrand	39	chr4	131908709	131908799	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.8599
chr5	112758435	112758451	protein_coding	Tfip11	exon	ENSMUSG00000029345	ProperStrand	111	chr6	71832638	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-4.4227
chr5	121658491	121658516	protein_coding	Rpl6	exon	ENSMUSG00000029614	ProperStrand	332	chr2	26493379	26493421	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-0.9754
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr14	61398407	61398423	protein_coding	C1qtnf9	exon	ENSMUSG00000071347	ProperStrand	187	1	-5.4967
chr9	83289655	83292148	protein_coding	Lca5	exon	ENSMUSG00000032258	ProperStrand	13	chr15	82980084	82980190	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	6	-inf
chr15	81859678	81860003	protein_coding	Xrcc6	exon	ENSMUSG00000022471	ProperStrand	34	chr7	138645961	138645978	protein_coding	Fgfr2	intron	ENSMUSG00000030849	NonProperStrand	95	1	-13.5347
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	64333076	64333098	protein_coding	Megf11	intron	ENSMUSG00000036466	NonProperStrand	64	1	-4.3396
chr14	49278542	49278573	protein_coding	Otx2	exon	ENSMUSG00000021848	ProperStrand	19	chr11	62416951	62417029	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	2	-13.3534
chr12	105934862	105934924	protein_coding	Dicer1	exon	ENSMUSG00000041415	ProperStrand	61	chr7	116663748	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.4834
chr11	75388080	75388125	protein_coding	Slc43a2	utr3	ENSMUSG00000038178	ProperStrand	45	chr1	162968477	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-6.6485
chr9	64024959	64024998	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	chr4	122968679	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	2	-4.2154
chr11	60277664	60277703	protein_coding	Drg2	exon	ENSMUSG00000020537	ProperStrand	13	chr9	59525858	59525958	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	1	-10.2798
chr3	79689972	79690049	protein_coding	Fam198b	utr5	ENSMUSG00000027955	ProperStrand	9	chr16	23111761	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.4225
chr9	65551397	65551477	protein_coding	Zfp609	exon	ENSMUSG00000040524	ProperStrand	87	chr5	121655062	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.0684
chr15	64144179	64144197	protein_coding	Asap1	intron	ENSMUSG00000022377	ProperStrand	29	chr15	34370618	34370675	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-4.9323
chr17	75939453	75939512	protein_coding	Fam98a	exon	ENSMUSG00000002017	ProperStrand	22	chr1	162965997	162966041	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-5.5331
chr1	72896245	72898896	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	chr14	76247711	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	7	-9.8496
chr6	85394956	85395126	protein_coding	Smyd5	exon	ENSMUSG00000033706	ProperStrand	107	chr4	131866169	131866249	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-2.6262
chr5	135857669	135858180	protein_coding	Pom121	exon	ENSMUSG00000053293	ProperStrand	127	chr7	118219574	118219603	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	6	-15.4657
chr6	129533251	129534179	protein_coding	Klre1	exon	ENSMUSG00000050241	NonProperStrand	20	chr9	15119370	15119426	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	2	-11.7564
chr19	40296926	40296942	protein_coding	Pdlim1	utr3	ENSMUSG00000055044	ProperStrand	8	chr11	6428094	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-7.1562
chr11	103683422	103683502	protein_coding	Nsf	utr3	ENSMUSG00000034187	ProperStrand	20	chr2	32817309	32817608	protein_coding	Rpl12	utr5	ENSMUSG00000038900	ProperStrand	167	1	-13.4861
chr13	58228942	58228985	protein_coding	Hnrnpa0	exon	ENSMUSG00000007836	ProperStrand	110	chr12	112779254	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-3.6308
chr11	62418014	62418036	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	chr11	116938557	116938693	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	12	-10.0745
chr6	125414163	125414181	protein_coding	Cd9	intron	ENSMUSG00000030342	NonProperStrand	6	chr16	11144204	11144304	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	1	-15.2045
chr18	20878546	20878581	protein_coding	B4galt6	exon	ENSMUSG00000056124	ProperStrand	31	chr1	182740378	182741987	protein_coding	H3f3a	exon	ENSMUSG00000060743	ProperStrand	46	6	-20.7432
chr10	127523105	127523151	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	1	-2.6262
chr8	125626585	125627840	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	chr7	116664811	116664909	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-1.3355
chr16	91354470	91354560	LTR	MTD	MaLR	chr16MTD91354325	NonProperStrand	1	chr16	91354682	91354762	Simple_repeat	(TG)n	Simple_repeat	chr16(TG)n91354700	NonProperStrand	1	1	-inf
chr11	80965641	80965658	protein_coding	Accn1	exon	ENSMUSG00000020704	NonProperStrand	228	chr4	130305550	130305620	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	1	-7.2459
chr19	59037361	59037377	protein_coding	Eno4	exon	ENSMUSG00000048029	NonProperStrand	14	chr19	8799600	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-9.7095
chr11	75546434	75546524	protein_coding	Ywhae	utr5	ENSMUSG00000020849	ProperStrand	176	chr1	89673592	89673651	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-1.4767
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	21934462	21934478	protein_coding	Acp5	exon	ENSMUSG00000001348	ProperStrand	66	1	-4.2811
chr9	77639779	77639869	protein_coding	Gclc	intron	ENSMUSG00000032350	ProperStrand	49	chr5	130300473	130300553	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.8625
chr3	103605593	103605646	protein_coding	Dclre1b	utr3	ENSMUSG00000027845	ProperStrand	3	chr4	126699170	126699224	protein_coding	Sfpq	exon	ENSMUSG00000028820	ProperStrand	340	1	-16.2363
chr6	137700269	137700287	protein_coding	Strap	utr3	ENSMUSG00000030224	ProperStrand	27	chr11	106362304	106362343	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-7.4316
chr17	35357142	35357200	protein_coding	Nfkbil1	utr3	ENSMUSG00000042419	ProperStrand	4	chr12	60141387	60141477	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-12.4879
chr5	124842029	124842615	protein_coding	Sbno1	exon	ENSMUSG00000038095	ProperStrand	134	chr8	32260346	32260436	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-3.1328
chr9	115125682	115125782	protein_coding	Osbpl10	exon	ENSMUSG00000040875	ProperStrand	6	chr4	131908356	131908409	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-5.6461
chr11	69481246	69481572	protein_coding	Eif4a1	exon	ENSMUSG00000059796	ProperStrand	108	chr14	76247753	76247843	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-5.3141
chr13	23643426	23643508	protein_coding	Hist1h4f	exon	ENSMUSG00000069274	ProperStrand	28	chr2	26768395	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-7.1139
chr14	103482602	103482702	protein_coding	Fbxl3	exon	ENSMUSG00000022124	ProperStrand	21	chr5	23825941	23825957	protein_coding	Kcnh2	exon	ENSMUSG00000038319	ProperStrand	242	1	-12.6454
chr17	46822300	46822483	protein_coding	Ppp2r5d	exon	ENSMUSG00000059409	ProperStrand	97	chr19	8963027	8963044	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-4.4285
chr12	114290175	114290191	protein_coding	Pacs2	intron	ENSMUSG00000021143	NonProperStrand	302	chr7	19549018	19549057	protein_coding	Nova2	utr3	ENSMUSG00000030411	ProperStrand	23	1	-12.0159
chr6	90332844	90332862	protein_coding	Zxdc	utr3	ENSMUSG00000034430	ProperStrand	10	chr1	162965980	162965999	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-7.1350
chr6	143813837	143813853	protein_coding	Sox5	intron	ENSMUSG00000041540	NonProperStrand	49	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-8.1448
chr9	82868620	82868640	protein_coding	Phip	intron	ENSMUSG00000032253	NonProperStrand	3	chr7	29136525	29136632	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-8.4253
chr15	34370429	34370977	protein_coding-noncoding	Rpl30	utr3	ENSMUSG00000058600	ProperStrand	30	chr15	34370543	34370681	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	13	-inf
chr7	31349544	31349729	protein_coding	U2af1l4	exon	ENSMUSG00000078765	ProperStrand	1	chr18	33954821	33954901	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-inf
chr11	44344842	44356166	protein_coding	Rnf145	exon	ENSMUSG00000019189	ProperStrand	46	chr11	6428076	6428166	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.6801
chr17	95160909	95218243	Satellite	MMSAT4	Satellite	chr17MMSAT495216724	NonProperStrand	14	chr12	92811869	92811908	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	1	-11.5290
chr8	86438561	86462325	protein_coding	Lphn1	intron	ENSMUSG00000013033	ProperStrand	221	chr16	23111720	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-2.2118
chr10	72437415	72437431	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr3	133130685	133130785	protein_coding	Tet2	exon	ENSMUSG00000040943	ProperStrand	192	1	-6.0108
chr10	79003331	79003397	protein_coding	Mier2	utr3	ENSMUSG00000042570	ProperStrand	10	chr9	120038563	120038663	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-10.6868
chr15	59157597	59157649	protein_coding	Sqle	exon	ENSMUSG00000022351	ProperStrand	19	chr8	129468800	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-6.6760
chr6	39349126	39349226	protein_coding	Mkrn1	utr3	ENSMUSG00000029922	ProperStrand	177	chr1	162965986	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-1.7467
chr5	120974054	120974257	protein_coding	Slc24a6	exon	ENSMUSG00000032754	ProperStrand	22	chr7	118219575	118219609	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-6.1281
chr2	91613185	91613203	protein_coding	Ambra1	exon	ENSMUSG00000040506	ProperStrand	65	chr7	54442907	54442973	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-9.5686
chr9	50452156	50452237	protein_coding	Dlat	exon	ENSMUSG00000000168	ProperStrand	26	chr10	79616864	79617154	protein_coding	Midn	exon	ENSMUSG00000035621	ProperStrand	36	6	-19.8930
chr4	43505692	43505896	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr17	23953991	23957997	protein_coding	Srrm2	utr3	ENSMUSG00000039218	ProperStrand	521	8	-5.6576
chr10	76521857	76521892	protein_coding	Col18a1	exon	ENSMUSG00000001435	ProperStrand	287	chr11	97489600	97489617	protein_coding	E130012A19Rik	exon	ENSMUSG00000043439	NonProperStrand	110	1	-8.9613
chr10	34002525	34002542	protein_coding	Tspyl1	exon	ENSMUSG00000047514	ProperStrand	22	chr5	108336363	108336426	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-6.8629
chr1	75499663	75499679	protein_coding	Obsl1	exon	ENSMUSG00000026211	NonProperStrand	192	chr19	9042728	9042792	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	1	-7.1449
chr19	7502333	7502350	protein_coding	Rtn3	exon	ENSMUSG00000024758	NonProperStrand	30	chr7	51503462	51503479	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	1	-10.0120
chr9	78326362	78329475	protein_coding	Eef1a1	utr3	ENSMUSG00000037742	ProperStrand	1990	chr5	130300418	130300555	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	36	-12.8014
chr17	29712108	29715793	protein_coding	Tbc1d22b	exon	ENSMUSG00000042203	ProperStrand	21	chr18	73693170	73693188	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	2	-12.2430
chr14	73023175	73023272	protein_coding	Fndc3a	intron	ENSMUSG00000033487	ProperStrand	84	chr11	62416989	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	2	-8.8221
chr13	73465794	73465826	protein_coding	Ndufs6	exon	ENSMUSG00000021606	ProperStrand	8	chr2	103588175	103588363	protein_coding	Nat10	exon	ENSMUSG00000027185	ProperStrand	124	1	-16.0008
chr10	87892264	87892281	protein_coding	Gnptab	exon	ENSMUSG00000035311	ProperStrand	65	chr8	73419657	73419704	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.9868
chr6	83318070	83318086	protein_coding	Tet3	exon	ENSMUSG00000034832	NonProperStrand	93	chr4	116827794	116827841	snoRNA	ENSMUSG00000064751_SNORD46	.	ENSMUSG00000064751	ProperStrand	132	1	-10.8495
chr7	52714958	52715074	protein_coding	Ftl1	utr5	ENSMUSG00000050708	ProperStrand	807	chr11	106362556	106362642	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	2	-4.3599
chr1	36849253	36865147	protein_coding	Tmem131	utr3	ENSMUSG00000026116	ProperStrand	129	chr7	116663634	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	6	-9.4295
chr16	52768000	52768090	LINE	Lx	L1	chr16Lx52767940	ProperStrand	1	chr16	52767690	52767780	SINE	ID_B1	B4	chr16ID_B152767654	ProperStrand	1	1	-inf
mmu-miR-6240	3	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr1	59749360	59749408	snoRNA	ENSMUSG00000077358_SNORD70	.	ENSMUSG00000077358	ProperStrand	63	1	-5.8077
chrX	51060959	51060975	protein_coding	1700013H16Rik	utr5	ENSMUSG00000054727	NonProperStrand	7	chr7	29136525	29136593	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-6.5022
chr19	8963105	8963178	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	chr14	51709218	51709266	tRNA	tRNA191-TyrGTA	.	482890	ProperStrand	21	1	-4.1775
chr7	29185801	29185851	protein_coding	Samd4b	utr3	ENSMUSG00000037513	ProperStrand	72	chr15	82725595	82725636	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	4	-inf
chr9	59518515	59519420	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr2	91436235	91436335	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-1.7865
chr6	87769189	87769558	protein_coding	Isy1	exon	ENSMUSG00000030056	ProperStrand	172	chr2	26494791	26494829	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.3850
chr2	155645633	155645677	protein_coding	Eif6	utr3	ENSMUSG00000027613	ProperStrand	42	chr11	95634339	95634357	protein_coding	Zfp652	intron	ENSMUSG00000075595	NonProperStrand	8	1	-17.9622
chr7	35005923	35012157	protein_coding	Gpi1	exon	ENSMUSG00000036427	ProperStrand	288	chr1	162967515	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-0.9709
chr4	124736325	124736344	protein_coding	Dnali1	exon	ENSMUSG00000042707	ProperStrand	45	chr6	71832550	71832603	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-6.1773
chr6	114260511	114260527	protein_coding	Slc6a1	exon	ENSMUSG00000030310	NonProperStrand	147	chr5	108336363	108336411	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-3.2017
chr7	13874748	13876539	protein_coding	Lig1	exon	ENSMUSG00000056394	ProperStrand	89	chr8	32260335	32260374	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	8	-20.7065
chr7	52711663	52711796	protein_coding	Gys1	utr3	ENSMUSG00000003865	ProperStrand	28	chr16	23111815	23111837	protein_coding	Eif4a2	intron	ENSMUSG00000022884	ProperStrand	356	9	-19.3090
chr5	147766925	147767025	protein_coding	Mtif3	utr3	ENSMUSG00000016510	ProperStrand	2	chr11	115884892	115884910	protein_coding	H3f3b	intron	ENSMUSG00000016559	ProperStrand	76	1	-inf
chr15	52147697	52147714	protein_coding	Slc30a8	intron	ENSMUSG00000022315	ProperStrand	4	chr5	151755615	151755632	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-13.4061
chr7	20494529	20494606	protein_coding	Pvr	exon	ENSMUSG00000040511	ProperStrand	4	chr19	8800376	8800466	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-9.0532
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr2	103588240	103588355	protein_coding	Nat10	exon	ENSMUSG00000027185	NonProperStrand	64	1	-5.7768
chr6	125597802	125597869	protein_coding	Vwf	exon	ENSMUSG00000001930	ProperStrand	20	chr5	74489642	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-5.9076
chr1	45196274	45196364	LINE	L1Md_F2	L1	chr1L1Md_F245195161	ProperStrand	1	chr7	54442543	54442633	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-inf
chr18	36910906	36912095	protein_coding	Ik	exon	ENSMUSG00000024474	ProperStrand	60	chr3	152450608	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	1	-8.8044
chr5	34112034	34112050	protein_coding	Letm1	exon	ENSMUSG00000005299	NonProperStrand	145	chr2	9781257	9781273	protein_coding	Gata3	intron	ENSMUSG00000015619	ProperStrand	12	1	-14.8214
chr17	27559700	27572220	protein_coding	Grm4	utr3	ENSMUSG00000063239	ProperStrand	147	chr9	120038518	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	3	-4.5060
chr5	123175320	123177219	protein_coding	P2rx4	exon	ENSMUSG00000029470	ProperStrand	16	chr15	34370565	34370665	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	7	-inf
chr9	114657162	114657193	protein_coding	Cmtm6	utr3	ENSMUSG00000032434	ProperStrand	24	chr5	139764113	139764131	protein_coding	Adap1	intron	ENSMUSG00000056413	NonProperStrand	5	1	-19.0819
chr6	114321444	114321524	LINE	L1MC5	L1	chr6L1MC5114321450	ProperStrand	1	chr6	114321326	114321416	LINE	L1_Mus1	L1	chr6L1_Mus1114321039	NonProperStrand	1	1	-inf
chr11	47318768	47318785	protein_coding	Sgcd	intron	ENSMUSG00000020354	ProperStrand	24	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.3401
chr7	24779190	24779213	SINE	ID_B1	B4	chr7ID_B124779183	NonProperStrand	54	chr2	112208150	112208168	protein_coding	Tmem85	utr5	ENSMUSG00000027131	ProperStrand	19	1	-15.8504
chr15	30777152	30810879	protein_coding	Ctnnd2	exon	ENSMUSG00000022240	ProperStrand	24	chr12	17552971	17553039	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-6.9013
chr2	90235292	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	133592210	133592226	protein_coding	Atp2a1	exon	ENSMUSG00000030730	ProperStrand	49	1	-4.8520
chr12	81322489	81322520	protein_coding	Actn1	intron	ENSMUSG00000015143	ProperStrand	128	chr3	107271068	107271086	protein_coding	Slc6a17	utr3	ENSMUSG00000027894	ProperStrand	16	1	-14.4849
chr12	60102881	60102898	protein_coding	Sec23a	exon	ENSMUSG00000020986	ProperStrand	16	chr8	32260335	32260426	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	4	-19.8615
chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	chr15	79908929	79908955	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-1.8235
chr9	99483993	99484009	protein_coding	Dbr1	exon	ENSMUSG00000032469	ProperStrand	162	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	2	-6.6467
chr9	43921925	43921942	lincRNA	Gm3906	intron	ENSMUSG00000092003	NonProperStrand	41	chr1	71637355	71639649	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	17	-inf
chr11	100235703	100235786	protein_coding	Jup	exon	ENSMUSG00000001552	ProperStrand	123	chrX	152009278	152009294	protein_coding	Ptchd1	exon	ENSMUSG00000041552	NonProperStrand	294	1	-8.6902
chr12	3907644	3907764	protein_coding	Dnmt3a	utr3	ENSMUSG00000020661	ProperStrand	40	chr10	127520361	127520387	protein_coding	Atp5b	utr5	ENSMUSG00000025393	ProperStrand	612	5	-inf
chr7	87449378	87449478	protein_coding	Prc1	exon	ENSMUSG00000038943	ProperStrand	35	chr4	131908232	131908295	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.2627
chr14	125027463	125027484	protein_coding	Fgf14	intron	ENSMUSG00000025551	ProperStrand	5	chr7	133635902	133635998	protein_coding	Atxn2l	utr3	ENSMUSG00000032637	NonProperStrand	8	1	-18.7911
chr7	134416076	134416166	protein_coding	Sephs2	exon	ENSMUSG00000049091	ProperStrand	15	chr14	33005156	33005236	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-6.7159
chr2	25416113	25416129	protein_coding	Edf1	exon	ENSMUSG00000015092	ProperStrand	22	chr11	106362609	106362635	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-9.4258
chr7	52228430	52228516	protein_coding	Cpt1c	exon	ENSMUSG00000007783	ProperStrand	94	chr11	97642952	97642969	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.7410
chr8	73056478	73056521	protein_coding	Fkbp8	exon	ENSMUSG00000019428	ProperStrand	52	chr19	7100806	7103139	protein_coding	Stip1	exon	ENSMUSG00000024966	ProperStrand	100	1	-12.5769
chr7	134007488	134007550	protein_coding	Hirip3	exon	ENSMUSG00000042606	ProperStrand	28	chr18	35716832	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	6	-18.5054
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr2	145076805	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-2.4305
chr1	36868836	36868936	protein_coding	Tmem131	intron	ENSMUSG00000026116	ProperStrand	129	chr5	130300482	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.3095
chr13	100430892	100430921	LINE	L1Md_F2	L1	chr13L1Md_F2100430045	ProperStrand	1	chr4	131908265	131908355	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-inf
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr6	71832597	71832687	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-0.8925
chrX	105999516	105999534	protein_coding	Brwd3	exon	ENSMUSG00000063663	ProperStrand	16	chr16	23111722	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	7	-19.7694
chr14	21555446	21555505	protein_coding	Camk2g	utr3	ENSMUSG00000021820	ProperStrand	24	chr7	116663637	116663727	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	6	-22.0641
chr6	54379743	54379760	lincRNA	9130019P16Rik	exon	ENSMUSG00000073067	ProperStrand	255	chr10	127522197	127522221	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	1	-5.8003
chr11	79762519	79762536	protein_coding	Utp6	exon	ENSMUSG00000035575	ProperStrand	28	chr4	149618447	149619226	protein_coding	Eno1	exon	ENSMUSG00000063524	ProperStrand	432	1	-10.8993
chr6	54592333	54592391	protein_coding	Plekha8	utr3	ENSMUSG00000005225	ProperStrand	21	chr7	116663742	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-7.4505
chr8	97896861	97896878	protein_coding	Mmp15	utr3	ENSMUSG00000031790	NonProperStrand	8	chr7	29136525	29136621	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-14.8002
chr9	64576051	64576103	protein_coding	Rab11a	exon	ENSMUSG00000004771	ProperStrand	27	chr10	20053282	20053304	protein_coding	Bclaf1	exon	ENSMUSG00000037608	ProperStrand	83	3	-19.4868
chr2	118082100	118082120	protein_coding	Fsip1	intron	ENSMUSG00000027344	ProperStrand	4	chr11	6428108	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-8.6824
chr17	8109979	8109997	antisense	D030054H15Rik	.	ENSMUSG00000090069	NonProperStrand	1	chr4	131908356	131908418	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-inf
chr18	27427431	27427511	LINE	L1_Mus1	L1	chr18L1_Mus127425476	ProperStrand	1	chr2	14871949	14872039	protein_coding	Cacnb2	intron	ENSMUSG00000057914	ProperStrand	6	1	-inf
chr5	140971804	140971905	SINE	B1_Mur4	Alu	chr5B1_Mur4140971785	NonProperStrand	5	chr8	113366285	113366334	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	5	-inf
chr4	141658671	141658730	protein_coding	Kazn	utr3	ENSMUSG00000040606	ProperStrand	123	chr8	73419657	73419727	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-5.2957
chr10	76182409	76183709	protein_coding	Col6a1	utr5	ENSMUSG00000001119	ProperStrand	13	chr9	59519393	59519458	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	1	-10.2798
chr2	177759506	177759570	protein_coding	Etohi1	intron	ENSMUSG00000074519	ProperStrand	1	chr11	106874233	106874252	tRNA	tRNA945-ArgCCG	.	1096007	ProperStrand	133	1	-inf
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr12	31987803	31987911	protein_coding	Lamb1	exon	ENSMUSG00000002900	ProperStrand	87	4	-17.1517
chr10	82347703	82347793	protein_coding	Txnrd1	exon	ENSMUSG00000020250	ProperStrand	47	chr8	13876123	13876203	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-7.6310
chr5	23825941	23825957	protein_coding	Kcnh2	exon	ENSMUSG00000038319	ProperStrand	242	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-0.9935
chr6	122259157	122259179	protein_coding	M6pr	utr5	ENSMUSG00000007458	ProperStrand	56	chr4	132394297	132394357	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	1	-9.2763
chrX	98638820	98639682	protein_coding	Nono	exon	ENSMUSG00000031311	ProperStrand	102	chr15	98350178	98350268	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-3.7557
chr5	37186270	37186345	protein_coding	Mrfap1	utr3	ENSMUSG00000055302	ProperStrand	62	chr16	23110828	23110872	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-4.3106
chr15	78504284	78504301	protein_coding	Elfn2	exon	ENSMUSG00000043460	NonProperStrand	20	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.3741
chr4	131399490	131399506	protein_coding	Mecr	exon	ENSMUSG00000028910	NonProperStrand	109	chr10	110918553	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-4.2349
chr10	6063958	6063975	protein_coding	Akap12	intron	ENSMUSG00000038587	ProperStrand	1008	chr9	65049529	65049561	snRNA	ENSMUSG00000075930_U5	.	ENSMUSG00000075930	ProperStrand	175	1	-5.5631
chr11	77317914	77317931	protein_coding	Git1	exon	ENSMUSG00000011877	ProperStrand	95	chr2	28368986	28369004	protein_coding	Ralgds	utr5	ENSMUSG00000026821	NonProperStrand	60	1	-12.3906
chr9	44147570	44147754	protein_coding	Hmbs	exon	ENSMUSG00000032126	ProperStrand	10	chr8	129468780	129468860	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-7.9945
chr2	126400478	126400494	protein_coding	Slc27a2	exon	ENSMUSG00000027359	ProperStrand	17	chr13	101541068	101541087	protein_coding	Cenph	intron	ENSMUSG00000045273	NonProperStrand	45	1	-16.4439
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr11	74656811	74656836	protein_coding	Mnt	utr3	ENSMUSG00000000282	ProperStrand	56	1	-5.0881
chr2	26493474	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr12	110271945	110271961	protein_coding	Begain	exon	ENSMUSG00000040867	NonProperStrand	9	1	-10.0526
chr5	34112034	34112050	protein_coding	Letm1	exon	ENSMUSG00000005299	NonProperStrand	145	chr9	103255918	103255935	protein_coding	Cdv3	utr3	ENSMUSG00000032803	ProperStrand	68	1	-11.2903
chr6	108330918	108330996	protein_coding	Itpr1	exon	ENSMUSG00000030102	ProperStrand	94	chr4	131865915	131865966	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.1229
chr10	76781280	76781380	protein_coding	Adarb1	intron	ENSMUSG00000020262	ProperStrand	15	chr9	120038483	120038530	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.6922
chr3	105745919	105745950	protein_coding	Atp5f1	exon	ENSMUSG00000000563	ProperStrand	28	chr4	131908236	131908298	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-4.6667
chr4	131908366	131908463	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr14	64081496	64081513	protein_coding	Fam167a	utr3	ENSMUSG00000035095	ProperStrand	80	1	-6.6883
chr6	70794803	70794820	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chr10	83989627	83989643	protein_coding	Ckap4	utr3	ENSMUSG00000046841	ProperStrand	60	1	-11.4217
chr11	87862960	87863013	protein_coding	Srsf1	exon	ENSMUSG00000018379	ProperStrand	49	chr16	23110530	23110584	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-7.2925
chr4	133144438	133144507	protein_coding	Gpn2	exon	ENSMUSG00000028848	ProperStrand	6	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.7876
chr4	43526328	43526348	protein_coding	Car9	utr3	ENSMUSG00000028463	NonProperStrand	35	chr12	110887829	110887888	snoRNA	ENSMUSG00000084549_SNORD113	.	ENSMUSG00000084549	ProperStrand	196	1	-12.0275
chr15	79604454	79604472	protein_coding	Dnalc4	intron	ENSMUSG00000022420	NonProperStrand	1	chr11	106362304	106362326	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-inf
chr10	82224605	82224629	protein_coding	Nfyb	utr5	ENSMUSG00000020248	ProperStrand	25	chr7	29136587	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.9451
chr17	35087313	35089207	processed_transcript	1110038B12Rik	.	ENSMUSG00000092203	ProperStrand	126	chr8	73419657	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-3.4054
chr8	66578323	66578340	protein_coding	Tll1	intron	ENSMUSG00000053626	NonProperStrand	18	chr17	35089181	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-7.8895
chr3	54993076	54993099	protein_coding	Sohlh2	exon	ENSMUSG00000027794	ProperStrand	11	chr9	15118247	15118313	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	3	-15.7810
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	165115911	165115928	protein_coding	Elmo2	exon	ENSMUSG00000017670	NonProperStrand	8	2	-13.7415
chr8	25643432	25643448	protein_coding	Ido2	utr3	ENSMUSG00000031549	NonProperStrand	29	chr15	102455433	102455450	protein_coding	Atf7	intron	ENSMUSG00000052414	ProperStrand	14	1	-17.8340
chr11	79860385	79860427	protein_coding	Crlf3	utr3	ENSMUSG00000017561	ProperStrand	47	chr1	162967123	162967178	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	2	-14.5367
chr5	23907915	23907931	protein_coding	Abcb8	exon	ENSMUSG00000028973	NonProperStrand	49	chr16	23110912	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-1.9572
chr5	122691914	122691930	protein_coding	Hvcn1	utr3	ENSMUSG00000064267	ProperStrand	182	chr6	71832629	71832688	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-3.4989
chr13	62202214	62202262	SINE	B1_Mus2	Alu	chr13B1_Mus262202211	ProperStrand	1	chr15	102844825	102844841	protein_coding	Hoxc5	exon	ENSMUSG00000022485	ProperStrand	40	1	-inf
chr19	7532308	7532324	protein_coding	Rtn3	exon	ENSMUSG00000024758	ProperStrand	35	chr9	15119701	15119759	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.6006
chr4	147520990	147521008	protein_coding	Fbxo6	exon	ENSMUSG00000055401	ProperStrand	26	chr16	23111777	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.3497
chr9	40611097	40611197	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr1	172975116	172975189	tRNA	tRNA699-GlyGCC	.	1497363	ProperStrand	660	1	-3.4894
chr5	113673313	113673399	protein_coding	Sgsm1	utr3	ENSMUSG00000042216	ProperStrand	20	chr2	158185554	158185616	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	2	-13.8624
chr15	79202617	79202642	protein_coding	Tmem184b	intron	ENSMUSG00000009035	ProperStrand	37	chr16	23110910	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.6429
chr2	4974190	4974207	protein_coding	Optn	exon	ENSMUSG00000026672	ProperStrand	451	chr17	35087896	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-1.6090
chr18	59490475	59490492	protein_coding	Chsy3	intron	ENSMUSG00000058152	ProperStrand	35	chr7	52382014	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	2	-12.4721
chr17	36097663	36097764	protein_coding	Abcf1	exon	ENSMUSG00000038762	ProperStrand	206	chr1	162965531	162965574	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.2648
chr11	110051493	110051509	protein_coding	Abca6	exon	ENSMUSG00000044749	NonProperStrand	3	chr7	117189876	117189943	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-9.5269
chr13	98255251	98255285	lincRNA	Gm11019	intron	ENSMUSG00000078952	ProperStrand	113	chr18	61740061	61747089	protein_coding	Csnk1a1	exon	ENSMUSG00000024576	ProperStrand	64	2	-18.5671
chr4	155182666	155182766	protein_coding	Mrpl20	utr3	ENSMUSG00000029066	ProperStrand	5	chr19	8798501	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-10.3212
chr14	22664685	22664725	protein_coding	Vdac2	utr3	ENSMUSG00000021771	ProperStrand	18	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7867
chr19	5802075	5802138	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr2	75503181	75503321	protein_coding	Hnrnpa3	exon	ENSMUSG00000059005	ProperStrand	289	1	-4.4706
chr8	64017614	64028377	protein_coding	Palld	exon	ENSMUSG00000058056	NonProperStrand	125	chr13	49779747	49779802	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-5.5679
chr2	163979732	163979822	protein_coding	Stk4	utr3	ENSMUSG00000018209	ProperStrand	20	chr15	34370545	34370625	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-5.6655
chr11	95926462	95926517	protein_coding	Ube2z	exon	ENSMUSG00000014349	ProperStrand	41	chr3	153575089	153575114	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	1	-9.2604
chrX	96245892	96245908	protein_coding	Stard8	intron	ENSMUSG00000031216	ProperStrand	142	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-7.2089
chr10	38848222	38848302	protein_coding	1700025K23Rik	intron	ENSMUSG00000051736	ProperStrand	1	chr7	54442452	54442542	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	1	-inf
chr7	75149206	75149234	protein_coding	Igf1r	exon	ENSMUSG00000005533	ProperStrand	121	chr4	131826030	131826128	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	3	-17.2071
chr11	87431358	87431378	protein_coding	Hsf5	exon	ENSMUSG00000070345	NonProperStrand	3	chr1	162965531	162965587	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-9.4650
chr10	84582284	84582300	protein_coding	Mterfd3	utr3	ENSMUSG00000049038	NonProperStrand	13	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-8.2652
chr2	154387922	154387966	protein_coding	E2f1	intron	ENSMUSG00000027490	ProperStrand	28	chr14	96988123	96988179	snoRNA	ENSMUSG00000064581_SNORA30	.	ENSMUSG00000064581	ProperStrand	146	3	-21.6706
chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	chr11	106362636	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	3	-7.3938
chr11	17853704	17853791	protein_coding	Etaa1	exon	ENSMUSG00000016984	ProperStrand	7	chr10	95499367	95499383	protein_coding	Eea1	utr3	ENSMUSG00000036499	ProperStrand	82	1	-17.0622
chr11	120673002	120673217	protein_coding	Fasn	exon	ENSMUSG00000025153	ProperStrand	298	chr16	23110530	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	19	-22.4654
chrX	12748903	12748937	protein_coding	Usp9x	utr3	ENSMUSG00000031010	ProperStrand	174	chr11	99885311	99885327	protein_coding	Krt33b	exon	ENSMUSG00000057723	NonProperStrand	352	1	-7.6419
chr6	35461724	35461743	protein_coding	Mtpn	utr3	ENSMUSG00000029840	ProperStrand	18	chr4	131865933	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.8813
chr11	104330089	104330108	protein_coding	1700081L11Rik	utr5	ENSMUSG00000018412	NonProperStrand	5	chr16	23110828	23110874	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr4	122971887	122971977	protein_coding	Pabpc4	exon	ENSMUSG00000011257	ProperStrand	85	chr16	23111385	23111465	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.8188
chr11	115470694	115470710	protein_coding	Mif4gd	exon	ENSMUSG00000020743	NonProperStrand	6	chr6	124665330	124665420	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	1	-11.6766
chr11	116535466	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr5	108336363	108336460	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	11	-4.7445
chr1	137031139	137031184	protein_coding	Ptpn7	exon	ENSMUSG00000031506	ProperStrand	2	chr8	82201565	82201584	protein_coding	Otud4	utr3	ENSMUSG00000036990	ProperStrand	45	1	-19.7664
chr6	131338047	131338104	protein_coding	Csda	exon	ENSMUSG00000030189	ProperStrand	86	chr4	131908689	131908722	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.7764
chr6	127035234	127035324	protein_coding	9630033F20Rik	utr3	ENSMUSG00000038028	ProperStrand	10	chr7	29136562	29136642	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.7572
chr19	21810759	21810777	SINE	PB1D10	Alu	chr19PB1D1021810714	ProperStrand	1	chr19	8800084	8800118	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-inf
chr5	143666926	143666997	protein_coding	Actb	exon	ENSMUSG00000029580	NonProperStrand	7	chr2	26494773	26494829	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	NonProperStrand	27	2	-inf
chr1	95397119	95398137	protein_coding	Sept2	exon	ENSMUSG00000026276	ProperStrand	136	chr16	19883898	19884021	protein_coding	A930003A15Rik	exon	ENSMUSG00000075330	ProperStrand	93	1	-10.7898
chr8	85946954	85946995	protein_coding	Clgn	exon	ENSMUSG00000002190	ProperStrand	6	chr7	16524110	16524183	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	1	-14.4813
chr4	114741487	114741504	protein_coding	Tal1	utr3	ENSMUSG00000028717	NonProperStrand	69	chrX	99382777	99383234	protein_coding	Rps4x	exon	ENSMUSG00000031320	ProperStrand	139	1	-11.3456
chr13	13578931	13578948	protein_coding	Nid1	exon	ENSMUSG00000005397	ProperStrand	112	chr19	3526836	3526918	protein_coding	Ppp6r3	exon	ENSMUSG00000024908	ProperStrand	63	1	-11.9624
chr16	18839342	18839361	protein_coding	2510002D24Rik	utr3	ENSMUSG00000071632	ProperStrand	5	chr16	23111754	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-19.6255
chr7	26102608	26102673	protein_coding	Megf8	exon	ENSMUSG00000045039	ProperStrand	100	chr2	130103459	130103503	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-7.0462
chr2	144219070	144219143	protein_coding	Csrp2bp	exon	ENSMUSG00000027425	ProperStrand	32	chr2	150669153	150671991	protein_coding	Abhd12	exon	ENSMUSG00000032046	ProperStrand	38	1	-15.4945
chr17	46911886	46911906	protein_coding	Rpl7l1	utr3	ENSMUSG00000063888	ProperStrand	37	chr19	44188462	44188552	snoRNA	ENSMUSG00000077391_SNORA12	.	ENSMUSG00000077391	ProperStrand	506	2	-15.8185
chrX	71517851	71517951	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	chr13	90238596	90238666	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	1	-2.1980
chr8	107043472	107043511	protein_coding	Nae1	exon	ENSMUSG00000031878	ProperStrand	13	chr5	130300460	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-12.8632
chr12	73982139	73982204	protein_coding	4930447C04Rik	utr3	ENSMUSG00000021098	ProperStrand	8	chr10	62341139	62341229	protein_coding	Tet1	exon	ENSMUSG00000047146	ProperStrand	286	2	-19.6400
chr1	72659502	72659592	protein_coding	Smarcal1	exon	ENSMUSG00000039354	ProperStrand	23	chr16	23111694	23111774	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.5778
chr7	54442850	54443364	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	chr10	110918549	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	9	-11.6141
chr7	109275063	109275087	protein_coding	Nup98	exon	ENSMUSG00000063550	ProperStrand	100	chr19	9042761	9042861	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	1	-8.4416
chr14	120220669	120220685	protein_coding	Hs6st3	intron	ENSMUSG00000053465	ProperStrand	15	chr2	26493371	26493474	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-6.4501
chr2	26494708	26494808	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	chr10	62228325	62228367	snoRNA	ENSMUSG00000080469_Snord98	.	ENSMUSG00000080469	ProperStrand	124	1	-1.8752
chr2	90235292	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	4286133	4286149	protein_coding	Adrbk1	utr3	ENSMUSG00000024858	NonProperStrand	4	1	-10.0500
chr5	111222068	111222108	protein_coding	Ulk1	exon	ENSMUSG00000029512	ProperStrand	92	chr7	51505822	51505876	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	1	-7.7612
chr9	89995294	89997160	protein_coding	Morf4l1	exon	ENSMUSG00000062270	ProperStrand	33	chr5	121655063	121655143	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.8873
chr1	162968442	162968461	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	chr8	113366285	113366312	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	1	-2.2467
chr7	13516178	13516203	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr6	115757991	115758041	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	2	-2.5883
chr12	57546660	57546740	LINE	L2a	L2	chr12L2a57546665	NonProperStrand	1	chr12	57547027	57547117	LINE	L2a	L2	chr12L2a57546867	NonProperStrand	1	1	-inf
chr6	108799456	108799524	protein_coding	Edem1	exon	ENSMUSG00000030104	ProperStrand	18	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-9.4107
chr7	95266597	95266613	protein_coding	Grm5	intron	ENSMUSG00000049583	NonProperStrand	145	chr17	35089182	35089231	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-3.7987
chr9	118330864	118330929	LINE	L2b	L2	chr9L2b118330827	ProperStrand	5	chr6	94776857	94776875	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	1	-14.2648
chr5	91044781	91065878	protein_coding	Rassf6	intron	ENSMUSG00000029370	NonProperStrand	6	chr16	23110833	23110987	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-6.6757
chr9	83678799	83681881	protein_coding	Elovl4	exon	ENSMUSG00000032262	ProperStrand	159	chr4	131908236	131908349	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	5	-3.2158
chr1	107743297	107743317	protein_coding	Tnfrsf11a	utr3	ENSMUSG00000026321	NonProperStrand	100	chr5	130300470	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-4.7946
chr11	120515434	120515534	protein_coding	Notum	utr3	ENSMUSG00000042988	ProperStrand	13	chr10	23505184	23505215	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.8218
chr19	44188384	44188456	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr8	125731536	125731552	protein_coding	Gm20388	intron	ENSMUSG00000092329	ProperStrand	295	1	-4.6721
chr18	21054478	21054494	protein_coding	Trappc8	exon	ENSMUSG00000033382	ProperStrand	43	chr2	158205317	158205405	snoRNA	ENSMUSG00000064585_SNORA71	.	ENSMUSG00000064585	ProperStrand	418	1	-10.0966
chr6	71857820	71858697	protein_coding	Ptcd3	exon	ENSMUSG00000063884	ProperStrand	34	chr1	87983871	87983951	snoRNA	ENSMUSG00000077274_SNORA26	.	ENSMUSG00000077274	ProperStrand	361	1	-10.8640
chr13	9833563	9833652	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr5	108329601	108330898	protein_coding	Rpl5	utr5	ENSMUSG00000058558	ProperStrand	235	1	-2.4476
chr4	106439368	106439448	protein_coding	Acot11	intron	ENSMUSG00000034853	ProperStrand	61	chr11	98806765	98806855	protein_coding	Rara	intron	ENSMUSG00000037992	ProperStrand	37	1	-14.2552
chr2	33013514	33013604	protein_coding-noncoding	Ralgps1	utr3	ENSMUSG00000038831	ProperStrand	1	chr2	33013776	33013856	protein_coding	Ralgps1	intron	ENSMUSG00000038831	ProperStrand	75	1	-inf
chr18	37801737	37801828	protein_coding	Taf7	utr3	ENSMUSG00000051316	ProperStrand	24	chr5	130300433	130300513	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	5	-17.4795
chr12	33638595	33638614	lincRNA	4933406C10Rik	exon	ENSMUSG00000086543	ProperStrand	52	chr4	131908809	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.4243
chr2	116793779	116793814	snRNA	ENSMUSG00000065794_U1	.	ENSMUSG00000065794	ProperStrand	5	chr5	108334224	108334322	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-9.9148
chr7	135022105	135022147	protein_coding	Zfp646	utr5	ENSMUSG00000049739	ProperStrand	29	chrX	34622906	34622977	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-4.5339
chr1	153602594	153602610	protein_coding	Edem3	utr5	ENSMUSG00000043019	ProperStrand	84	chr6	93742378	93742394	protein_coding	Magi1	exon	ENSMUSG00000045095	ProperStrand	106	1	-11.4941
chr6	52589224	52589267	snoRNA	ENSMUSG00000064792_SNORA32	.	ENSMUSG00000064792	ProperStrand	151	chr5	74489620	74489670	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	2	-3.8464
chr17	74715287	74715419	protein_coding	Dpy30	exon	ENSMUSG00000024067	ProperStrand	3	chr16	23111777	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-13.4294
chr16	17452420	17452437	protein_coding	Crkl	utr5	ENSMUSG00000006134	ProperStrand	43	chr9	15119648	15119727	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.2218
chr9	64836236	64836254	protein_coding	Ptplad1	utr3	ENSMUSG00000033629	ProperStrand	13	chr1	162967515	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-10.5459
chr12	81322485	81322575	protein_coding	Actn1	intron	ENSMUSG00000015143	ProperStrand	128	chr9	15119287	15119353	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	3	-9.0350
chr8	96696727	96697032	protein_coding	Mt2	utr5	ENSMUSG00000031762	ProperStrand	71	chr4	131908236	131908318	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.1847
chrX	166427798	166427846	protein_coding	Mid1	utr3	ENSMUSG00000035299	ProperStrand	209	chr9	120039534	120039624	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	3	-3.8546
chr8	113795883	113795929	protein_coding	Rfwd3	utr3	ENSMUSG00000033596	ProperStrand	71	chr10	23505151	23505243	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-4.7132
chr11	102060738	102060754	protein_coding	Hdac5	exon	ENSMUSG00000008855	NonProperStrand	39	chr11	6428102	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.9898
chr2	38280204	38280223	lincRNA	Gm13589	intron	ENSMUSG00000085950	NonProperStrand	31	chr1	10206636	10222463	protein_coding	Arfgef1	exon	ENSMUSG00000067851	ProperStrand	54	1	-14.8646
chr8	13159389	13159405	protein_coding	Lamp1	exon	ENSMUSG00000031447	ProperStrand	92	chr10	23505152	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-0.7103
chr7	87069647	87069686	SINE	PB1D9	Alu	chr7PB1D987069648	NonProperStrand	3	chr16	23110960	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-inf
chr11	120439567	120439662	protein_coding	Arhgdia	utr3	ENSMUSG00000025132	ProperStrand	39	chr1	162967514	162967566	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.2823
chr12	17552948	17553091	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr19	8798484	8798553	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	12	-3.7596
chr19	7359208	7359224	protein_coding	Mark2	exon	ENSMUSG00000024969	ProperStrand	75	chr9	15118518	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	1	-8.8943
mmu-miR-6239	0	18	miRNA	mmu-miR-6239	.	mmu-miR-6239	ProperStrand	31	chr12	106269284	106269384	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-5.4160
chr10	62427718	62427808	protein_coding	Dna2	exon	ENSMUSG00000036875	ProperStrand	35	chr4	131866155	131866235	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-4.6877
chr2	109739347	109739386	protein_coding	Lin7c	utr3	ENSMUSG00000027162	ProperStrand	15	chr19	8963065	8963155	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.8348
chr3	96362370	96362873	protein_coding	Txnip	exon	ENSMUSG00000038393	ProperStrand	172	chr12	106269341	106269393	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-2.2539
chr2	90235308	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	26771224	26771241	protein_coding	Surf1	exon	ENSMUSG00000015790	ProperStrand	7	1	-8.8025
chr8	23293308	23293325	protein_coding	Ckap2	intron	ENSMUSG00000037725	ProperStrand	69	chr17	35087911	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-4.9293
chr11	80965641	80965658	protein_coding	Accn1	exon	ENSMUSG00000020704	NonProperStrand	228	chr6	29311352	29311385	protein_coding	Calu	exon	ENSMUSG00000029767	ProperStrand	47	1	-11.1286
chr16	18777496	18777512	protein_coding	Cldn5	exon	ENSMUSG00000041378	NonProperStrand	2	chr15	34370630	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-inf
chrX	34622908	34623037	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	chr1	87983864	87983997	snoRNA	ENSMUSG00000077274_SNORA26	.	ENSMUSG00000077274	ProperStrand	361	13	-17.8504
chr8	122129036	122129052	protein_coding	Taf1c	utr5	ENSMUSG00000031832	ProperStrand	26	chr6	64088282	64088301	protein_coding	Grid2	intron	ENSMUSG00000071424	NonProperStrand	76	1	-14.5342
chr18	78019788	78019997	protein_coding	Atp5a1	exon	ENSMUSG00000025428	ProperStrand	254	chr7	29136551	29136631	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	4	-2.6698
chr2	80219493	80219513	LTR	RMER10A	ERVL	chr2RMER10A80218993	NonProperStrand	2	chr7	148634770	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-inf
chr8	124961788	124961862	protein_coding	Mvd	exon	ENSMUSG00000006517	ProperStrand	13	chr12	114359283	114361329	protein_coding	Mta1	exon	ENSMUSG00000021144	ProperStrand	74	1	-16.0368
chr13	49799424	49799496	protein_coding	Iars	intron	ENSMUSG00000037851	ProperStrand	95	chr1	39605599	39605616	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-6.4327
chr7	13611098	13613028	protein_coding	Trim28	exon	ENSMUSG00000005566	ProperStrand	296	chr11	69482354	69482410	snoRNA	ENSMUSG00000089542_snoU6-77	.	ENSMUSG00000089542	ProperStrand	138	4	-inf
chr19	3488063	3488079	protein_coding	Ppp6r3	intron	ENSMUSG00000024908	NonProperStrand	3	chr2	22444509	22444552	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-14.1417
chr4	149532028	149532118	protein_coding-noncoding	Slc2a7	utr5	ENSMUSG00000062064	NonProperStrand	1	chr4	149532222	149532312	protein_coding	Slc2a7	exon	ENSMUSG00000062064	NonProperStrand	1	1	-inf
chr12	110918155	110918221	snoRNA	ENSMUSG00000065749_AF357428	.	ENSMUSG00000065749	ProperStrand	218	chr1	89673685	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	4	-5.1760
chr5	104263055	104263073	protein_coding	Aff1	exon	ENSMUSG00000029313	NonProperStrand	5	chr3	123210915	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-6.8746
chr5	117542360	117542450	protein_coding	Suds3	utr3	ENSMUSG00000066900	ProperStrand	22	chr2	32818828	32818908	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	5	-20.1113
chr11	34935341	34935395	protein_coding	Slit3	intron	ENSMUSG00000056427	ProperStrand	61	chr4	131908236	131908275	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.3950
chr2	90235297	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr14	64479191	64479207	protein_coding	Pinx1	utr5	ENSMUSG00000021958	NonProperStrand	2	1	-11.8388
chr2	178194847	178194864	protein_coding	Cdh26	exon	ENSMUSG00000039155	NonProperStrand	77	chr2	83693562	83693578	protein_coding	Fam171b	exon	ENSMUSG00000048388	NonProperStrand	175	1	-10.6640
chr11	69481334	69481432	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	chr16	32243922	32243943	snoRNA	ENSMUSG00000080440_SNORA79	.	ENSMUSG00000080440	ProperStrand	140	1	-1.7673
chr18	10052129	10052153	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr2	32818804	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	12	-19.4969
chrX	20425695	20425739	protein_coding	Araf	utr5	ENSMUSG00000001127	ProperStrand	23	chr17	24857779	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	3	-9.9209
chr16	20655076	20655335	protein_coding	Psmd2	exon	ENSMUSG00000006998	ProperStrand	99	chr4	131908266	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-1.5936
chr6	83059829	83059846	protein_coding	Mrpl53	utr3	ENSMUSG00000030037	ProperStrand	13	chr4	131908689	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-6.5299
chr10	62048325	62048415	protein_coding	Ddx21	exon	ENSMUSG00000020075	ProperStrand	137	chr2	26493395	26493475	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-2.2780
chr4	151704154	151706405	protein_coding	Rpl22	intron	ENSMUSG00000028936	ProperStrand	112	chr16	23111692	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-1.9953
chr11	69870769	69870785	protein_coding	Asgr1	exon	ENSMUSG00000020884	NonProperStrand	145	chr2	26494708	26494762	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.6345
chr11	48614377	48614467	protein_coding-noncoding	Gnb2l1	utr5	ENSMUSG00000020372	ProperStrand	21	chr3	68889127	68889248	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	2	-8.6847
chr1	138778937	138787307	protein_coding	Nr5a2	exon	ENSMUSG00000026398	ProperStrand	43	chr13	22063694	22063731	tRNA	tRNA89-LysTTT	.	233531	ProperStrand	10	6	-inf
chr19	46446452	46446510	protein_coding	Tmem180	exon	ENSMUSG00000025227	ProperStrand	20	chr17	24857776	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.2966
chr17	31640574	31640590	protein_coding	Wdr4	exon	ENSMUSG00000024037	NonProperStrand	18	chr8	73419657	73419710	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-5.4264
chr1	63223703	63223806	protein_coding	Eef1b2	utr5	ENSMUSG00000025967	ProperStrand	106	chr1	20552542	20552558	protein_coding	Pkhd1	exon	ENSMUSG00000043760	NonProperStrand	49	2	-19.9051
chr4	130308506	130308543	protein_coding	Pum1	exon	ENSMUSG00000028580	ProperStrand	131	chr14	33005139	33005172	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-2.5816
chr6	87795663	87795752	protein_coding	Cnbp	exon	ENSMUSG00000030057	ProperStrand	46	chr7	148634788	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-7.4817
chr18	45718263	45718280	protein_coding	Kcnn2	intron	ENSMUSG00000054477	ProperStrand	26	chr11	62416600	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-6.8193
chr17	31596039	31596847	protein_coding	Pde9a	exon	ENSMUSG00000041119	ProperStrand	16	chr7	29136621	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-11.6124
chr6	25285812	25285902	LINE	L1Md_F2	L1	chr6L1Md_F225285078	ProperStrand	1	chr7	54443250	54443330	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-inf
chr14	47948933	47948949	LTR	RMER17A2	ERVK	chr14RMER17A247948307	NonProperStrand	43	chr11	97643007	97643060	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.0564
chr6	67217273	67217291	protein_coding	Serbp1	exon	ENSMUSG00000036371	ProperStrand	261	chr16	36071984	36072000	protein_coding	Ccdc58	utr5	ENSMUSG00000075229	NonProperStrand	55	1	-10.5411
chr11	97565215	97565247	protein_coding	Psmb3	exon	ENSMUSG00000069744	ProperStrand	26	chr11	48616661	48616706	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	2	-17.3106
chr4	43505711	43505791	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr7	13896612	13896702	protein_coding	Lig1	utr3	ENSMUSG00000056394	ProperStrand	89	1	-2.3829
chr16	18608515	18608538	antisense	4930588K23Rik	.	ENSMUSG00000075335	NonProperStrand	3	chr1	168239525	168239541	protein_coding	Ildr2	exon	ENSMUSG00000040612	ProperStrand	103	1	-19.2717
chr4	116827121	116827143	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	chr17	35088971	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	2	-1.3097
chr1	75447246	75447262	protein_coding	Accn4	utr5	ENSMUSG00000033007	NonProperStrand	23	chr1	162966812	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	3	-18.0980
chr11	60965783	60965862	protein_coding	Usp22	utr3	ENSMUSG00000042506	ProperStrand	75	chr2	26494708	26494789	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.7116
chr11	95823823	95823913	protein_coding	Igf2bp1	utr3	ENSMUSG00000013415	ProperStrand	140	chr14	76372315	76372395	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	1	-7.3006
chr1	24619347	24619382	protein_coding	Gm10222	exon	ENSMUSG00000067736	NonProperStrand	11	chr1	162966851	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-9.6957
chrX	71589886	71589904	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-5.0692
chr19	10116351	10116367	protein_coding	Fads3	exon	ENSMUSG00000024664	NonProperStrand	16	chr1	89681248	89681348	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-8.0850
chr12	110979226	110979258	lincRNA	Mirg	exon	ENSMUSG00000091158	ProperStrand	15	chr5	74489573	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	10	-23.0109
chr1	137369378	137369430	protein_coding	Nav1	exon	ENSMUSG00000009418	ProperStrand	38	chr17	24857794	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.0936
chr3	156224612	156224628	lincRNA	4930570G19Rik	exon	ENSMUSG00000085084	ProperStrand	326	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-4.4287
chr5	24805443	24805533	protein_coding	Mll3	exon	ENSMUSG00000038056	ProperStrand	31	chr4	131908799	131908881	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-6.0994
chr12	19723412	19723432	LTR	MURVY-int	ERV1	chr12MURVY-int19718193	NonProperStrand	8	chr8	77633699	77633716	protein_coding	Mcm5	exon	ENSMUSG00000005410	ProperStrand	199	1	-15.0474
chr3	97817679	97851651	protein_coding	Notch2	exon	ENSMUSG00000027878	ProperStrand	86	chr7	117189982	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.6904
chr16	37526422	37526484	protein_coding	Gtf2e1	intron	ENSMUSG00000022828	ProperStrand	16	chr1	88247803	88247876	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-7.7318
chr16	89789406	89789422	protein_coding	Tiam1	exon	ENSMUSG00000002489	ProperStrand	80	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.7626
chr16	87405857	87416129	protein_coding	Ltn1	exon	ENSMUSG00000052299	ProperStrand	49	chr4	131908236	131908295	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	5	-9.0615
chr7	26559612	26559628	protein_coding	Axl	exon	ENSMUSG00000002602	NonProperStrand	47	chr2	26494766	26494826	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.5527
chr5	3586253	3586315	protein_coding	C030048B08Rik	intron	ENSMUSG00000040302	ProperStrand	13	chr14	33005044	33005134	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-7.0085
chr1	157137656	157137704	protein_coding	Xpr1	intron	ENSMUSG00000026469	ProperStrand	15	chr4	131865869	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.2332
chr7	5062341	5062361	protein_coding	Rfpl4	exon	ENSMUSG00000035191	NonProperStrand	27	chr13	93209562	93209578	protein_coding	Ankrd34b	exon	ENSMUSG00000045034	NonProperStrand	28	1	-16.4889
chr4	32079363	32079382	protein_coding	Map3k7	exon	ENSMUSG00000028284	ProperStrand	16	chr4	85016349	85016365	protein_coding	Sh3gl2	intron	ENSMUSG00000028488	NonProperStrand	313	1	-12.6904
chr1	74470436	74470453	protein_coding	Vil1	exon	ENSMUSG00000026175	ProperStrand	68	chr17	24857715	24857781	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.0900
chr3	153573547	153573597	snoRNA	ENSMUSG00000064731_Snord45b	.	ENSMUSG00000064731	ProperStrand	205	chr2	130101288	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-4.2076
chr16	44215885	44215971	protein_coding	Gm608	exon	ENSMUSG00000068284	ProperStrand	17	chr7	29136613	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.6910
chr6	30162058	30162074	protein_coding	Ube2h	utr3	ENSMUSG00000039159	ProperStrand	96	chr9	41826303	41830483	protein_coding	Sorl1	exon	ENSMUSG00000049313	ProperStrand	112	1	-11.1156
chr4	46554809	46554826	protein_coding	Coro2a	exon	ENSMUSG00000028337	NonProperStrand	24	chr14	75985039	75985056	protein_coding	Spert	intron	ENSMUSG00000034913	ProperStrand	11	1	-18.3875
chr4	116827657	116827691	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	chr16	48289154	48289232	protein_coding	Dppa4	exon	ENSMUSG00000058550	ProperStrand	13	6	-20.1239
chr15	76126379	76126397	protein_coding	Gm10345	exon	ENSMUSG00000071724	ProperStrand	9	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-9.0335
chr16	57391760	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr5	144478878	144478931	protein_coding	Usp42	exon	ENSMUSG00000051306	ProperStrand	17	1	-10.3453
chr6	70805436	70805516	snoRNA	ENSMUSG00000065750_SNORA5	.	ENSMUSG00000065750	ProperStrand	165	chr19	8963024	8963114	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-0.8197
chr5	136707644	136707662	protein_coding	Sh2b2	exon	ENSMUSG00000005057	NonProperStrand	101	chr10	110918549	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-4.4387
mmu-miR-6240	1	19	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr17	35064856	35064965	protein_coding	Slc44a4	exon	ENSMUSG00000007034	NonProperStrand	4	1	-11.5429
chr13	97695378	97695478	protein_coding	Gcnt4	intron	ENSMUSG00000091387	ProperStrand	4	chr3	123210902	123210923	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-7.3786
chr9	78023109	78023145	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr17	71987736	71987752	protein_coding	Wdr43	exon	ENSMUSG00000041057	NonProperStrand	4	1	-11.5167
chr13	32796319	32796336	protein_coding	Mylk4	utr3	ENSMUSG00000044951	ProperStrand	11	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.8470
chr2	127058158	127058223	protein_coding	Snrnp200	exon	ENSMUSG00000003660	ProperStrand	203	chr8	32260385	32260425	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	3	-6.3725
chr11	59608775	59608792	protein_coding-noncoding	Flcn	utr3	ENSMUSG00000032633	NonProperStrand	1	chr16	23110895	23110944	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr18	42481705	42481724	protein_coding	Rbm27	exon	ENSMUSG00000024491	NonProperStrand	10	chr4	131908689	131908753	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-10.8073
chr6	45494576	45494594	protein_coding	Cntnap2	intron	ENSMUSG00000039419	NonProperStrand	283	chr12	106269284	106269384	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	2	-2.7656
chr5	24005628	24005807	protein_coding	Agap3	exon	ENSMUSG00000023353	ProperStrand	39	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-7.7847
chr2	158185537	158185653	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr16	23110455	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	18	-1.7515
chrX	123743876	123743893	LTR	LTRIS2	ERV1	chrXLTRIS2123743504	NonProperStrand	7	chr16	23110964	23110991	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.4785
chr2	179912752	179912782	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr4	147278361	147278378	protein_coding	Mfn2	intron	ENSMUSG00000029020	NonProperStrand	2	1	-17.3610
chr16	4879644	4879660	protein_coding	Fam100a	exon	ENSMUSG00000039568	ProperStrand	2	chr15	79908957	79909015	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	2	-inf
chr7	148636908	148637137	protein_coding	Rplp2	exon	ENSMUSG00000025508	ProperStrand	106	chr1	162968470	162968512	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-4.9689
chr4	43505710	43505790	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	NonProperStrand	174	chr3	108357263	108357353	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	NonProperStrand	17	1	-13.7419
chr1	74485366	74485383	protein_coding	Usp37	utr3	ENSMUSG00000033364	ProperStrand	47	chr11	69481342	69481432	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	NonProperStrand	24	1	-15.6775
chr8	87481592	87481614	protein_coding	Rnaseh2a	utr3	ENSMUSG00000052926	ProperStrand	14	chr6	70805450	70805573	snoRNA	ENSMUSG00000065750_SNORA5	.	ENSMUSG00000065750	ProperStrand	165	1	-14.2512
chr8	98399675	98399701	protein_coding	Got2	exon	ENSMUSG00000031672	ProperStrand	85	chr17	24857777	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-3.1953
chr2	52256349	52280255	protein_coding	Arl5a	utr3	ENSMUSG00000036093	ProperStrand	15	chr4	131908689	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-6.0926
chr2	32818817	32818942	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	chr11	69481333	69481432	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	26	-4.5896
chr11	76073902	76073921	protein_coding	Nxn	intron	ENSMUSG00000020844	ProperStrand	20	chr10	110930022	110930384	protein_coding	Nap1l1	exon	ENSMUSG00000058799	ProperStrand	185	1	-13.2818
chr5	37667536	37667552	protein_coding	Crmp1	exon	ENSMUSG00000029121	ProperStrand	85	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-7.0463
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr3	89750435	89750451	protein_coding	Atp8b2	exon	ENSMUSG00000060671	ProperStrand	140	1	-6.9061
chrX	135510687	135510704	protein_coding	Nrk	exon	ENSMUSG00000052854	ProperStrand	24	chr16	23110827	23110851	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.3518
chr8	67881439	67881456	LTR	MTEa-int	MaLR	chr8MTEa-int67880462	ProperStrand	39	chr3	41359690	41385142	protein_coding	Phf17	utr5	ENSMUSG00000025764	ProperStrand	101	1	-13.1373
chr7	141966387	141966487	protein_coding	Dock1	intron	ENSMUSG00000058325	ProperStrand	22	chr9	15119706	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.4840
chr9	21543363	21543853	protein_coding	Ldlr	exon	ENSMUSG00000032193	ProperStrand	60	chr11	69483190	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.4498
chr11	87311360	87311393	protein_coding	Tex14	utr5	ENSMUSG00000010342	ProperStrand	41	chr5	140857296	140857313	protein_coding	Snx8	intron	ENSMUSG00000029560	ProperStrand	106	1	-12.9394
chr7	19548850	19548867	lincRNA	Gm17370	exon	ENSMUSG00000092034	ProperStrand	8	chr11	75578869	75578915	protein_coding	Ywhae	utr3	ENSMUSG00000020849	ProperStrand	176	1	-15.2738
chr11	4820972	4820990	protein_coding	Thoc5	intron	ENSMUSG00000034274	ProperStrand	325	chr3	153575112	153575167	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	1	-5.1626
chr3	27406646	27406693	protein_coding	Fndc3b	intron	ENSMUSG00000039286	ProperStrand	31	chr3	123210854	123210907	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.2114
chr11	80403662	80403679	protein_coding	Myo1d	intron	ENSMUSG00000035441	NonProperStrand	24	chr10	5991432	5991546	protein_coding	Akap12	exon	ENSMUSG00000038587	ProperStrand	1008	1	-9.5216
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr8	16948808	16948824	protein_coding	Csmd1	intron	ENSMUSG00000060924	NonProperStrand	25	1	-10.4836
chr1	182261853	182261869	protein_coding	Itpkb	intron	ENSMUSG00000038855	NonProperStrand	27	chr18	67953992	67954010	protein_coding	Seh1l	utr3	ENSMUSG00000079614	ProperStrand	19	1	-17.2299
chr11	62416599	62416642	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	chr2	158205352	158205405	snoRNA	ENSMUSG00000064585_SNORA71	.	ENSMUSG00000064585	ProperStrand	418	2	-3.1206
chr9	96979293	96979323	protein_coding	Slc25a36	utr3	ENSMUSG00000032449	ProperStrand	159	chr18	35716754	35716844	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-1.6147
chr15	81110991	81111009	SINE	ID4	ID	chr15ID481110956	ProperStrand	272	chr2	26494708	26494808	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-0.7987
chr16	57391632	57391722	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr17	13112448	13112538	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	NonProperStrand	11	1	-13.7698
chr6	83111671	83111687	protein_coding	1700003E16Rik	exon	ENSMUSG00000030030	ProperStrand	352	chr19	9052593	9052648	protein_coding	Eef1g	utr3	ENSMUSG00000071644	ProperStrand	410	1	-5.9525
chr2	26493423	26493523	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr2	166890557	166890581	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	3	-3.4608
chr17	35647432	35647486	protein_coding	Pou5f1	exon	ENSMUSG00000024406	ProperStrand	104	chr2	26768392	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	2	-7.5349
chr1	63225577	63225668	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	chr17	35089181	35089239	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	8	-6.3998
chr2	26199468	26199515	protein_coding	Gpsm1	intron	ENSMUSG00000026930	ProperStrand	93	chr9	103401280	103401296	protein_coding	Tmem108	exon	ENSMUSG00000042757	NonProperStrand	323	1	-9.0615
chr15	102844825	102844841	protein_coding	Hoxc5	exon	ENSMUSG00000022485	ProperStrand	40	chr1	72272888	72272911	snRNA	ENSMUSG00000075752_U2	.	ENSMUSG00000075752	ProperStrand	535	1	-9.7499
chr10	110931308	110932399	protein_coding	Nap1l1	exon	ENSMUSG00000058799	ProperStrand	185	chr1	88247742	88247822	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-2.9911
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr13	51743567	51743639	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	2	-1.6186
chr1	53268698	53268779	protein_coding	Pms1	intron	ENSMUSG00000026098	ProperStrand	16	chr10	23505150	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	6	-19.7405
chr18	64067205	64067258	protein_coding	Wdr7	intron	ENSMUSG00000040560	ProperStrand	28	chr16	23110852	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-5.2588
chr6	71766222	71766239	protein_coding	Mrpl35	exon	ENSMUSG00000052962	ProperStrand	3	chr2	26494791	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-9.2771
chr12	84867125	84867146	protein_coding	Dcaf4	exon	ENSMUSG00000021222	ProperStrand	17	chr17	24857716	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	4	-14.9397
chr9	40609427	40610022	protein_coding	Hspa8	utr5	ENSMUSG00000015656	ProperStrand	798	chr6	134097815	134097831	protein_coding	Etv6	intron	ENSMUSG00000030199	NonProperStrand	77	1	-7.6410
chrX	71589886	71589906	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr1	89681130	89681176	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	2	-4.4133
chr17	35972409	35972465	protein_coding	Tubb5	exon	ENSMUSG00000001525	ProperStrand	624	chr5	130295414	130295491	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-1.1849
chr7	87235867	87235957	protein_coding	Zfp710	utr3	ENSMUSG00000048897	ProperStrand	229	chr5	108334195	108334275	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-2.3732
chr9	22184601	22184701	protein_coding	Anln	exon	ENSMUSG00000036777	ProperStrand	133	chr9	15119722	15119769	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.3647
chr11	6520349	6520440	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	chr5	108334195	108334242	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	8	-7.6904
chr5	115939511	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr17	35087894	35087944	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-0.6946
chr4	41144549	41144604	protein_coding	Ubap2	intron	ENSMUSG00000028433	ProperStrand	292	chr3	108228259	108228275	protein_coding	Sars	utr3	ENSMUSG00000068739	NonProperStrand	200	1	-7.7360
chr9	72596170	72596299	protein_coding	Nedd4	utr3	ENSMUSG00000032216	ProperStrand	308	chr5	3693225	3693241	protein_coding	Ankib1	exon	ENSMUSG00000040351	NonProperStrand	98	1	-9.0515
chr1	100404126	100404143	protein_coding	Slco6d1	exon	ENSMUSG00000026336	ProperStrand	2	chr3	123210930	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-9.1566
chr7	139446713	139446793	protein_coding	Fgfr2	intron	ENSMUSG00000030849	ProperStrand	100	chr13	20492718	20492808	protein_coding	Elmo1	intron	ENSMUSG00000041112	NonProperStrand	34	1	-13.4341
chr19	23713726	23713743	protein_coding	1700028P14Rik	intron	ENSMUSG00000033053	NonProperStrand	11	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-10.7649
chr10	27811212	27811263	protein_coding	Ptprk	intron	ENSMUSG00000019889	ProperStrand	45	chr10	23505150	23505196	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-3.0673
chr7	25670566	25673375	protein_coding	Rps19	exon	ENSMUSG00000040952	ProperStrand	101	chr9	114472241	114472331	protein_coding	Trim71	utr5	ENSMUSG00000079259	ProperStrand	162	1	-10.2742
chr4	11448399	11450081	protein_coding	1110037F02Rik	exon	ENSMUSG00000040720	ProperStrand	32	chr18	35102297	35102341	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	2	-12.5615
chr15	43114170	43114222	protein_coding	Eif3e	exon	ENSMUSG00000022336	ProperStrand	17	chr1	162965532	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-9.3718
chr10	77432753	77432770	protein_coding	Trpm2	intron	ENSMUSG00000009292	NonProperStrand	23	chr2	157119950	157120991	protein_coding	Rpn2	exon	ENSMUSG00000027642	ProperStrand	363	1	-11.6475
chr11	69617603	69617693	protein_coding	Tmem102	exon	ENSMUSG00000089876	ProperStrand	4	chr12	106269478	106269558	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	2	-15.8360
chr7	52822538	52822562	protein_coding	Hsd17b14	utr3	ENSMUSG00000030825	ProperStrand	4	chr9	63868722	63868738	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	1	-14.2592
chr11	68067261	68067277	protein_coding	Ntn1	intron	ENSMUSG00000020902	NonProperStrand	194	chr1	162967489	162967521	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-1.5040
chr10	75883129	75883209	protein_coding	Pcnt	exon	ENSMUSG00000001151	ProperStrand	127	chr16	23111735	23111825	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-0.8573
chr15	79913288	79913354	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr11	68717888	68717974	protein_coding	Rpl26	exon	ENSMUSG00000060938	ProperStrand	130	1	-2.2300
chr9	59513712	59516369	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr16	19883899	19884021	protein_coding	A930003A15Rik	exon	ENSMUSG00000075330	ProperStrand	93	1	-6.3106
chr1	162967490	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	chr7	16524110	16524210	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	1	-0.7112
chr9	50413550	50413567	protein_coding	AU019823	utr3	ENSMUSG00000059820	NonProperStrand	18	chr4	131865867	131865896	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.8813
chrX	71589888	71589908	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr11	6428035	6428087	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-2.6328
chr4	129200330	129201537	protein_coding	Hdac1	exon	ENSMUSG00000028800	ProperStrand	49	chr7	116664796	116664886	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.9031
chrX	132424067	132424157	protein_coding	Bhlhb9	exon	ENSMUSG00000072964	ProperStrand	11	chr11	116938614	116938694	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-9.5942
chr17	88382856	88382946	protein_coding	Msh6	exon	ENSMUSG00000005370	ProperStrand	150	chr18	35714179	35714259	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-1.8678
chr17	28958226	28958242	protein_coding	Brpf3	exon	ENSMUSG00000063952	ProperStrand	32	chr16	23111374	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-6.0728
chr14	66445369	66445407	protein_coding	Esco2	exon	ENSMUSG00000022034	ProperStrand	12	chr16	23111694	23111784	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.8390
chr10	93103984	93104000	protein_coding	Ntn4	utr5	ENSMUSG00000020019	NonProperStrand	7	chr17	45707728	45708026	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	1	-11.1351
chr17	71493920	71493939	lincRNA	Gm16724	intron	ENSMUSG00000085916	ProperStrand	13	chr6	124692685	124692737	protein_coding	Atn1	utr3	ENSMUSG00000004263	ProperStrand	20	1	-18.7925
chr11	60527121	60527185	protein_coding	Llgl1	utr3	ENSMUSG00000020536	ProperStrand	20	chr11	97642980	97643070	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.4938
chr5	96656741	96660728	protein_coding	Mrpl1	exon	ENSMUSG00000029486	ProperStrand	23	chr8	32260335	32260424	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-6.5150
chrX	7172632	7172722	protein_coding	Ccdc22	exon	ENSMUSG00000031143	NonProperStrand	51	chrX	7172901	7172991	protein_coding	Ppp1r3f	intron	ENSMUSG00000039556	NonProperStrand	2	1	-inf
chr2	104334280	104334296	protein_coding	Hipk3	utr5	ENSMUSG00000027177	NonProperStrand	4	chr16	23110940	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.6489
chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	chr3	68889298	68889335	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	3	-1.0414
chr15	100084524	100084548	protein_coding	Atf1	exon	ENSMUSG00000023027	ProperStrand	19	chr3	128921827	128921844	protein_coding	Pitx2	utr3	ENSMUSG00000028023	ProperStrand	8	2	-19.2864
chr19	30606528	30606608	SINE	B2_Mm2	B2	chr19B2_Mm230606445	NonProperStrand	1	chrX	132685103	132685193	SINE	B1F1	Alu	chrXB1F1132685070	NonProperStrand	1	1	-inf
chr12	57712546	57712615	protein_coding	Nkx2-9	utr3	ENSMUSG00000058669	ProperStrand	2	chr16	23109064	23109090	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-14.7417
chr4	140723745	140723761	protein_coding	Fbxo42	exon	ENSMUSG00000028920	ProperStrand	91	chr5	117559799	117559818	protein_coding	Suds3	exon	ENSMUSG00000066900	NonProperStrand	8	1	-16.5377
chr10	79179768	79179784	protein_coding	Hcn2	exon	ENSMUSG00000020331	ProperStrand	17	chr11	78150285	78150301	protein_coding	Pigs	exon	ENSMUSG00000041958	NonProperStrand	138	1	-14.2067
chr6	115757992	115758132	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr5	111121062	111121194	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	6	-3.3942
chr11	77996562	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	chr17	24857717	24857853	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	29	-3.7884
chr12	86312204	86314006	protein_coding	Fcf1	exon	ENSMUSG00000021243	ProperStrand	2	chr9	15118323	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-10.7700
chr7	29171541	29171558	protein_coding	Med29	utr3	ENSMUSG00000003444	NonProperStrand	134	chr3	123210854	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-0.9145
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chrX	11635848	11635865	protein_coding	Bcor	exon	ENSMUSG00000040363	NonProperStrand	293	2	-7.7510
chr15	81681529	81681545	protein_coding	Tob2	exon	ENSMUSG00000048546	NonProperStrand	3	chr7	116664852	116664924	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-inf
chr3	35792202	35792218	protein_coding	Dcun1d1	utr3	ENSMUSG00000027708	ProperStrand	14	chr17	13110948	13111007	protein_coding	Tcp1	exon	ENSMUSG00000068039	ProperStrand	116	2	-inf
chr3	19027264	19027288	LTR	MTE2b	MaLR	chr3MTE2b19027123	ProperStrand	1	chr14	63287572	63287613	snoRNA	ENSMUSG00000089531_SNORA73	.	ENSMUSG00000089531	ProperStrand	123	1	-inf
chr10	12902322	12902670	protein_coding	Ltv1	exon	ENSMUSG00000019814	ProperStrand	76	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-8.4532
chr4	53579355	53579455	protein_coding	Slc44a1	utr3	ENSMUSG00000028412	ProperStrand	38	chr7	29136575	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.1665
chr4	125825790	125825859	protein_coding	Fam176b	utr5	ENSMUSG00000050212	ProperStrand	6	chr3	84995363	84995380	protein_coding	Arfip1	intron	ENSMUSG00000074513	NonProperStrand	56	1	-17.8126
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr7	52309977	52309993	protein_coding	Prrg2	exon	ENSMUSG00000007837	NonProperStrand	281	1	-4.7651
chr14	103535843	103535861	protein_coding	Mycbp2	exon	ENSMUSG00000033004	ProperStrand	129	chr10	80643719	80643798	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-4.6115
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr10	23506278	23506348	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	2	-5.4416
chr7	13516167	13516196	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr4	149026816	149026832	protein_coding	Pik3cd	exon	ENSMUSG00000039936	ProperStrand	151	1	-6.8293
chr11	62416574	62416640	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	chr10	80641700	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	7	-6.8321
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr11	97489600	97489617	protein_coding	E130012A19Rik	exon	ENSMUSG00000043439	NonProperStrand	110	1	-6.5914
chr14	56159295	56159312	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	chr7	67123730	67123756	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	1	-7.1777
chr11	64797839	64797860	protein_coding	Elac2	intron	ENSMUSG00000020549	NonProperStrand	1	chr4	131865856	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr2	172825858	172825875	protein_coding	Rae1	utr5	ENSMUSG00000027509	NonProperStrand	44	chr4	131908236	131908316	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.8887
chr5	74489203	74489283	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr9	22155379	22155469	protein_coding	Anln	exon	ENSMUSG00000036777	ProperStrand	133	2	-6.8525
chr8	71351769	71351813	protein_coding	Ints10	utr3	ENSMUSG00000031864	ProperStrand	28	chr7	116663741	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.8921
chr7	148587832	148587865	protein_coding	Taldo1	exon	ENSMUSG00000025503	ProperStrand	28	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-8.4523
chr11	102212794	102213789	protein_coding	Slc4a1	exon	ENSMUSG00000006574	ProperStrand	3	chr8	32260334	32260424	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-10.9171
chr18	64668964	64671469	protein_coding	Nars	exon	ENSMUSG00000024587	ProperStrand	97	chr9	120039549	120039678	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	8	-20.4372
chr7	17372318	17372408	protein_coding-noncoding	Slc1a5	utr5	ENSMUSG00000001918	ProperStrand	2	chr4	131865855	131865933	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-8.7800
chr3	85943030	85943047	protein_coding	Rps3a	exon	ENSMUSG00000028081	ProperStrand	177	chr5	37667536	37667552	protein_coding	Crmp1	exon	ENSMUSG00000029121	ProperStrand	85	1	-10.4428
chr5	34234244	34234262	protein_coding	Whsc1	utr5	ENSMUSG00000057406	ProperStrand	409	chr11	6428089	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-0.9873
chr1	154230887	154233665	protein_coding	Tsen15	exon	ENSMUSG00000014980	ProperStrand	3	chr19	8798764	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-11.0963
chr3	98118211	98118311	protein_coding	Phgdh	exon	ENSMUSG00000053398	ProperStrand	46	chr17	35088957	35088995	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-6.3923
chr12	110881061	110881115	lincRNA	Rian	intron	ENSMUSG00000091793	ProperStrand	612	chr5	143722245	143722329	protein_coding	Fscn1	exon	ENSMUSG00000029581	ProperStrand	200	8	-19.3452
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr7	28094431	28095262	protein_coding	Ltbp4	exon	ENSMUSG00000040488	ProperStrand	91	1	-7.4848
chr19	8800377	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	chr1	59761158	59761180	snoRNA	ENSMUSG00000089512_SNORD11	.	ENSMUSG00000089512	ProperStrand	43	5	-17.0956
chr7	118218891	118218922	protein_coding	Eif4g2	exon	ENSMUSG00000005610	ProperStrand	134	chr10	107770351	107819818	protein_coding	Pawr	exon	ENSMUSG00000035873	ProperStrand	39	2	-18.4290
chrX	162940973	162941073	protein_coding	Tceanc	exon	ENSMUSG00000051224	ProperStrand	4	chr15	5068442	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-11.7103
chr11	120645349	120645365	protein_coding	Rfng	exon	ENSMUSG00000025158	NonProperStrand	13	chr19	8963087	8963180	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.1201
chr13	9833553	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr14	27815472	27815490	protein_coding	Hesx1	utr3	ENSMUSG00000040726	ProperStrand	17	2	-12.0299
chr8	125626985	125627005	snoRNA	ENSMUSG00000064450_Snord68	.	ENSMUSG00000064450	ProperStrand	181	chr18	35716821	35716878	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-1.3686
chr2	26493400	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr19	7497225	7497243	protein_coding	2700081O15Rik	exon	ENSMUSG00000053080	ProperStrand	9	1	-10.0526
chr3	103769846	103769866	pseudogene	A130049A11Rik	.	ENSMUSG00000089998	ProperStrand	5	chr16	18240811	18240926	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	4	-19.7829
chr3	89801728	89801828	protein_coding	Hax1	exon	ENSMUSG00000027944	ProperStrand	7	chr4	131865920	131865986	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.7768
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr10	127895519	127895567	tRNA	tRNA688-SerCGA	.	1290540	ProperStrand	71	1	-8.5894
chr12	111931021	111932785	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr14	76247711	76247843	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	5	-3.4194
chr10	119422675	119423393	protein_coding	Grip1	exon	ENSMUSG00000034813	ProperStrand	38	chr7	150717294	150717420	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	4	-20.7954
chr16	30957291	30957391	protein_coding	AI480653	utr3	ENSMUSG00000047434	ProperStrand	29	chr2	130103437	130103502	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	20	-inf
chr6	83318070	83318086	protein_coding	Tet3	exon	ENSMUSG00000034832	NonProperStrand	93	chr7	152047338	152047378	protein_coding	Fgf4	utr5	ENSMUSG00000050917	ProperStrand	66	1	-12.2410
chr4	139016106	139033044	protein_coding	Ubr4	exon	ENSMUSG00000066036	ProperStrand	304	chr9	15119700	15119767	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-1.6806
chr12	88778631	88778684	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	chr7	134671418	134671518	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	4	-6.2715
chr11	72023045	72023061	protein_coding	Txndc17	utr3	ENSMUSG00000020803	NonProperStrand	3	chr7	117189944	117189992	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-15.9373
chr8	98393465	98394692	protein_coding	Got2	exon	ENSMUSG00000031672	ProperStrand	85	chr16	23111394	23111474	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.8188
chr3	53257464	53257492	protein_coding	Nhlrc3	exon	ENSMUSG00000042997	ProperStrand	12	chr6	21946715	21946734	protein_coding	A430107O13Rik	intron	ENSMUSG00000062980	ProperStrand	8	1	-19.1875
chr7	71485150	71485166	protein_coding	Mtmr10	utr3	ENSMUSG00000030522	ProperStrand	6	chr9	120039533	120039591	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-7.9123
chr12	114290175	114290191	protein_coding	Pacs2	intron	ENSMUSG00000021143	NonProperStrand	302	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-4.0033
chr17	56419305	56419363	protein_coding	Plin3	exon	ENSMUSG00000024197	ProperStrand	23	chr13	107682583	107682600	protein_coding	Ipo11	exon	ENSMUSG00000042590	ProperStrand	120	2	-20.6714
chr5	14226340	14226357	protein_coding-noncoding	Sema3e	utr5	ENSMUSG00000063531	NonProperStrand	11	chr18	42389508	42389647	protein_coding	Lars	exon	ENSMUSG00000024493	ProperStrand	69	1	-16.4865
chr18	4110470	4110550	LINE	Lx5	L1	chr18Lx54110167	NonProperStrand	1	chr18	4110641	4110731	LINE	Lx5	L1	chr18Lx54110615	ProperStrand	1	1	-inf
chr11	68768015	68768031	protein_coding	Arhgef15	exon	ENSMUSG00000052921	NonProperStrand	21	chr4	131908379	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-5.4868
chr1	88248602	88248662	snoRNA	ENSMUSG00000064696_SNORD20	.	ENSMUSG00000064696	ProperStrand	89	chr10	23505152	23505209	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-3.8143
chr17	28828537	28828553	protein_coding	Mapk14	utr5	ENSMUSG00000053436	ProperStrand	40	chr7	150717298	150717425	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	7	-inf
chr17	28724779	28726802	protein_coding	Srpk1	utr3	ENSMUSG00000004865	ProperStrand	61	chr10	23505152	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-7.1524
chr15	31527797	31531405	protein_coding	Cct5	exon	ENSMUSG00000022234	ProperStrand	116	chr8	13416896	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-5.1632
chr5	136261893	136265577	protein_coding	Mdh2	exon	ENSMUSG00000019179	ProperStrand	50	chr16	23110907	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-1.9047
chr13	97289040	97289088	protein_coding	Polk	exon	ENSMUSG00000021668	ProperStrand	16	chr7	116663716	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-8.2861
chr6	6023518	6045163	protein_coding	Slc25a13	exon	ENSMUSG00000015112	ProperStrand	78	chr7	118219574	118219641	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	3	-9.0725
chr1	80273062	80273956	protein_coding	Cul3	exon	ENSMUSG00000004364	ProperStrand	15	chr16	23111777	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.3973
mmu-miR-6240	2	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr7	24713726	24713742	protein_coding	Vmn1r179	exon	ENSMUSG00000046924	NonProperStrand	69	1	-5.6294
chr3	101962299	101962379	protein_coding	Vangl1	exon	ENSMUSG00000027860	ProperStrand	25	chr17	35299507	35299597	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	6	-19.5933
chr7	24779190	24779213	SINE	ID_B1	B4	chr7ID_B124779183	NonProperStrand	54	chr2	35517015	35517031	protein_coding	Dab2ip	exon	ENSMUSG00000026883	NonProperStrand	58	1	-13.5952
chr7	26497079	26497128	protein_coding	Ccdc97	utr3	ENSMUSG00000002608	ProperStrand	10	chr15	100311922	100311938	protein_coding	Csrnp2	utr3	ENSMUSG00000044636	NonProperStrand	60	1	-16.9842
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	2	-2.7564
chr17	71788897	71788987	protein_coding	Smchd1	intron	ENSMUSG00000024054	ProperStrand	79	chr7	117189864	117189944	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	27	-19.4490
chr7	112782969	112782985	protein_coding	Arfip2	utr3	ENSMUSG00000030881	ProperStrand	191	chr5	111121066	111121119	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-4.1908
chr8	108233714	108233730	protein_coding	4933405L10Rik	exon	ENSMUSG00000013158	ProperStrand	94	chr12	110923173	110923231	snoRNA	ENSMUSG00000084487_SNORD113	.	ENSMUSG00000084487	ProperStrand	183	3	-19.0837
chr17	35299513	35299560	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	chr4	3762228	3762268	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	2	-2.7111
chr9	21823257	21823273	protein_coding	Elavl3	exon	ENSMUSG00000003410	NonProperStrand	137	chr17	39985547	39985650	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-4.3351
chr8	4259924	4259969	protein_coding	Timm44	utr3	ENSMUSG00000002949	ProperStrand	63	chr3	123210874	123210974	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.9875
chr14	104944934	104944956	LTR	RLTR11B	ERVK	chr14RLTR11B104944603	ProperStrand	1	chr5	108336363	108336423	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-inf
chr5	23825941	23825957	protein_coding	Kcnh2	exon	ENSMUSG00000038319	ProperStrand	242	chr12	92811976	92812014	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	1	-5.8091
chr11	70403120	70403137	protein_coding	Mink1	intron	ENSMUSG00000020827	NonProperStrand	12	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-12.2071
chr14	57314462	57314552	protein_coding	Mphosph8	exon	ENSMUSG00000079184	ProperStrand	29	chr16	23111725	23111805	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.1494
chrX	147241700	147242147	protein_coding	Maged2	exon	ENSMUSG00000025268	ProperStrand	7	chr5	74489587	74489679	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-8.0767
chr17	35822058	35822257	protein_coding	Ddr1	exon	ENSMUSG00000003534	ProperStrand	129	chr17	25099413	25099430	protein_coding	Cramp1l	utr3	ENSMUSG00000038002	ProperStrand	22	1	-13.8109
chr2	73667939	73667992	protein_coding	Atf2	exon	ENSMUSG00000027104	ProperStrand	37	chr16	23111777	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.7135
chr10	80046931	80047004	protein_coding	Fam108a	exon	ENSMUSG00000003346	ProperStrand	14	chr17	69732772	69732793	protein_coding	Zfp161	intron	ENSMUSG00000049672	ProperStrand	15	1	-19.4319
chr11	68067261	68067277	protein_coding	Ntn1	intron	ENSMUSG00000020902	NonProperStrand	194	chr17	25237181	25237255	protein_coding	Telo2	intron	ENSMUSG00000024170	ProperStrand	17	1	-13.5220
chr7	80683224	80683309	protein_coding	Chd2	intron	ENSMUSG00000078671	ProperStrand	69	chr10	23505152	23505198	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.0487
chr15	81542151	81542486	protein_coding	Rangap1	exon	ENSMUSG00000022391	ProperStrand	69	chr9	120038561	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.7911
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr7	152048840	152048857	protein_coding	Fgf4	utr3	ENSMUSG00000050917	ProperStrand	66	1	-6.8382
chr16	38445968	38446058	protein_coding	Adprh	exon	ENSMUSG00000002844	ProperStrand	30	chr7	4745115	4745195	protein_coding	Rpl28	exon	ENSMUSG00000030432	ProperStrand	220	2	-20.0087
chr11	104095196	104095214	protein_coding	Mapt	intron	ENSMUSG00000018411	ProperStrand	8	chr7	133940151	133940179	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	1	-12.4734
chr10	126502001	126503986	protein_coding	Cdk4	exon	ENSMUSG00000006728	ProperStrand	47	chr16	23110887	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	11	-14.9785
chr9	120486630	120486691	protein_coding	5830454E08Rik	exon	ENSMUSG00000052658	ProperStrand	2	chr5	147646768	147646843	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	1	-15.4219
chr16	22246917	22247319	protein_coding	Tra2b	exon	ENSMUSG00000022858	ProperStrand	32	chr7	20310054	20310070	protein_coding	Pvrl2	exon	ENSMUSG00000062300	ProperStrand	110	1	-13.3668
chrX	7451382	7451429	protein_coding	Otud5	exon	ENSMUSG00000031154	ProperStrand	79	chr7	148634776	148634835	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-3.4748
chr19	5799371	5799431	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr3	68889030	68889130	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	8	-2.2186
chr2	165213533	165213751	protein_coding	Zfp334	utr5	ENSMUSG00000017667	ProperStrand	8	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	4	-21.0704
chr4	115688099	115688120	protein_coding	Faah	intron	ENSMUSG00000034171	NonProperStrand	6	chr2	138188029	138188045	protein_coding	Btbd3	intron	ENSMUSG00000062098	NonProperStrand	121	1	-16.5523
chr16	17634343	17634419	protein_coding	Smpd4	intron	ENSMUSG00000005899	ProperStrand	33	chr16	23111457	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.1725
chr17	43727986	43728005	antisense	1700071M16Rik	.	ENSMUSG00000090307	ProperStrand	2	chr7	116663665	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-inf
chr6	11952993	11953012	protein_coding	Phf14	intron	ENSMUSG00000029629	ProperStrand	26	chr7	26451348	26452724	protein_coding	Exosc5	exon	ENSMUSG00000061286	ProperStrand	16	1	-17.6606
chr1	187144872	187146283	protein_coding	Iars2	exon	ENSMUSG00000026618	ProperStrand	68	chr2	26493366	26493474	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-5.9744
chr1	93263060	93263076	protein_coding	Fam132b	exon	ENSMUSG00000047443	NonProperStrand	98	chr9	15119676	15119769	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.8191
chr16	55904821	55904837	protein_coding	Cep97	utr3	ENSMUSG00000022604	ProperStrand	22	chr7	117190011	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-5.2455
chr7	29136039	29137213	protein_coding	Rps16	exon	ENSMUSG00000037563	ProperStrand	191	chr18	47093137	47093187	protein_coding	Gm949	utr3	ENSMUSG00000073568	ProperStrand	6	1	-15.7352
chrX	148471981	148472141	protein_coding	Smc1a	exon	ENSMUSG00000041133	ProperStrand	104	chr11	6520321	6520364	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	3	-15.0698
chr15	58577335	58577351	protein_coding	Fer1l6	intron	ENSMUSG00000037106	ProperStrand	54	chr18	63238393	63238409	protein_coding	Fam38b	exon	ENSMUSG00000041482	NonProperStrand	50	1	-13.8888
chr6	147004375	147004405	protein_coding	Mrps35	exon	ENSMUSG00000040112	ProperStrand	15	chr19	8963027	8963079	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.8348
chr2	24913359	24913449	protein_coding-noncoding	Nelf	utr5	ENSMUSG00000006476	ProperStrand	2	chr2	24912944	24913024	protein_coding	Nelf	intron	ENSMUSG00000006476	ProperStrand	40	1	-inf
chr2	168567484	168567503	protein_coding	Atp9a	intron	ENSMUSG00000027546	ProperStrand	16	chr7	116663692	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.9773
chr17	15863216	15863275	protein_coding	Chd1	exon	ENSMUSG00000023852	ProperStrand	82	chr4	131865856	131865946	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.3075
chr18	59490475	59490492	protein_coding	Chsy3	intron	ENSMUSG00000058152	ProperStrand	35	chr4	131865855	131865914	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-4.6795
chr2	77734234	77734252	protein_coding	Cwc22	exon	ENSMUSG00000027014	ProperStrand	17	chr14	33005038	33005099	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-6.4617
chr2	121176333	121176349	protein_coding	Ppip5k1	exon	ENSMUSG00000033526	ProperStrand	85	chr5	115939535	115939610	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-7.1715
chr14	59849535	59849635	protein_coding	Rcbtb1	intron	ENSMUSG00000035469	ProperStrand	39	chr10	23505152	23505213	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.8710
chr3	36623184	36623200	LTR	MLT1H	MaLR	chr3MLT1H36622969	ProperStrand	15	chr8	13416897	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-9.2502
chr6	88837494	88837580	protein_coding	Mcm2	exon	ENSMUSG00000002870	ProperStrand	83	chr6	122267158	122267209	protein_coding	M6pr	utr3	ENSMUSG00000007458	ProperStrand	56	4	-19.9329
chr2	25105521	25107254	protein_coding	Ndor1	exon	ENSMUSG00000006471	NonProperStrand	84	chr13	110693373	110693391	protein_coding	Pde4d	utr5	ENSMUSG00000021699	NonProperStrand	36	1	-13.6720
chr12	104663998	104664014	protein_coding	Ddx24	utr5	ENSMUSG00000041645	ProperStrand	34	chr14	31827477	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-8.0808
chr2	26767737	26767795	protein_coding-noncoding	Rpl7a	utr5	ENSMUSG00000062647	ProperStrand	53	chr16	23111389	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-6.0430
chr4	137071273	137071353	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	chr9	120037900	120037990	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	3	-2.0507
chr16	87472347	87472371	protein_coding	Usp16	exon	ENSMUSG00000025616	ProperStrand	3	chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	1	-14.4868
chr4	120821837	120821873	protein_coding	Rlf	exon	ENSMUSG00000049878	ProperStrand	58	chr11	69483180	69483270	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.5077
chr18	76259082	76259101	protein_coding	Zbtb7c	intron	ENSMUSG00000044646	ProperStrand	64	chr1	89673714	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	2	-5.4148
chr2	153050783	153050799	protein_coding	Tspyl3	exon	ENSMUSG00000074671	ProperStrand	228	chr9	15118322	15118356	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-1.2693
chr1	27841330	27841420	LTR	ORR1B1-int	MaLR	chr1ORR1B1-int27840385	NonProperStrand	1	chr9	110595415	110595505	protein_coding	Ccdc12	intron	ENSMUSG00000019659	ProperStrand	7	1	-inf
chr6	87950508	87954253	protein_coding	Rab7	exon	ENSMUSG00000079477	ProperStrand	33	chr9	120039628	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	4	-14.2504
chr15	82000403	82000483	protein_coding	Srebf2	exon	ENSMUSG00000022463	ProperStrand	592	chr17	45708828	45710173	protein_coding	Hsp90ab1	utr5	ENSMUSG00000023944	ProperStrand	1627	1	-2.4257
chr9	51557746	51557764	LINE	Lx8	L1	chr9Lx851556869	NonProperStrand	1	chr17	45707418	45707510	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	1	-inf
chr7	26559612	26559628	protein_coding	Axl	exon	ENSMUSG00000002602	NonProperStrand	47	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-5.6890
chr11	51449107	51449184	protein_coding	Rmnd5b	utr5	ENSMUSG00000001054	ProperStrand	6	chr13	95856366	95856384	protein_coding	Pde8b	intron	ENSMUSG00000021684	ProperStrand	43	1	-18.2794
chr9	103247235	103248095	protein_coding	Topbp1	exon	ENSMUSG00000032555	ProperStrand	81	chr4	131908689	131908737	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.8446
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr8	108760845	108760861	protein_coding	Prmt7	exon	ENSMUSG00000060098	NonProperStrand	8	1	-13.0622
chr9	108475235	108475325	protein_coding	Wdr6	utr3	ENSMUSG00000066357	ProperStrand	30	chr2	26494717	26494842	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	15	-20.0667
chr11	52466692	52466782	LTR	ORR1A2	MaLR	chr11ORR1A252466609	ProperStrand	1	chr12	36383826	36383906	LTR	ORR1B2	MaLR	chr12ORR1B236383827	ProperStrand	1	1	-inf
chr14	56159295	56159313	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	chr12	106269476	106269556	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-2.0404
chr8	80171627	80171645	lincRNA	4933431K23Rik	intron	ENSMUSG00000086451	NonProperStrand	8	chr5	54389948	54389965	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	1	-14.9003
chr3	135268101	135268121	protein_coding	Nfkb1	exon	ENSMUSG00000028163	ProperStrand	55	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-7.0976
chr10	23770362	23770378	protein_coding	Taar7f	exon	ENSMUSG00000060825	NonProperStrand	40	chr16	23111777	23111812	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.5776
chr12	64804728	64804818	LINE	L1Md_F3	L1	chr12L1Md_F364799767	ProperStrand	1	chr12	64804997	64805077	LTR	RLTR40	ERVK	chr12RLTR4064805008	ProperStrand	1	1	-inf
chr16	90386835	90386853	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	chr18	33954828	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-4.4429
chr11	62186866	62186956	protein_coding	Ncor1	exon	ENSMUSG00000018501	ProperStrand	132	chr8	73419707	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-1.7978
chr13	15698210	15698228	protein_coding	Gli3	intron	ENSMUSG00000021318	ProperStrand	54	chr2	152701307	152701378	protein_coding	Tpx2	exon	ENSMUSG00000027469	ProperStrand	111	1	-12.2909
chr9	57217029	57217046	LINE	Lx4A	L1	chr9Lx4A57216705	ProperStrand	16	chr4	131865967	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.1079
chr3	90284605	90284918	protein_coding	Ilf2	exon	ENSMUSG00000001016	ProperStrand	28	chr9	43947253	43947347	protein_coding	Mcam	exon	ENSMUSG00000032135	ProperStrand	27	1	-16.4796
chr10	41644311	41644329	protein_coding	Armc2	exon	ENSMUSG00000071324	ProperStrand	281	chr11	106362304	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	2	-5.0650
chr12	36818544	36818634	protein_coding	Bzw2	utr3	ENSMUSG00000020547	ProperStrand	29	chr5	121655064	121655144	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.1397
chr9	61761141	61761231	protein_coding	Rplp1	exon	ENSMUSG00000007892	ProperStrand	116	chr19	8800383	8800463	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-2.3635
chr11	107577580	107577598	protein_coding	Cacng1	exon	ENSMUSG00000020722	ProperStrand	2	chr2	32858831	32858927	protein_coding	Garnl3	intron	ENSMUSG00000038860	ProperStrand	14	1	-inf
chr2	89368462	89368478	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	chr4	122968599	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-3.4591
chr5	130731260	130731276	protein_coding	Sbds	utr5	ENSMUSG00000025337	NonProperStrand	1	chr5	28700880	28700899	protein_coding	Rbm33	intron	ENSMUSG00000048271	NonProperStrand	8	1	-inf
chr10	127522223	127522245	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr12	53383597	53383616	protein_coding	Nubpl	intron	ENSMUSG00000035142	ProperStrand	16	1	-11.3483
chr10	126954436	126954497	protein_coding	Shmt2	utr3	ENSMUSG00000025403	ProperStrand	94	chr8	108210267	108210284	protein_coding	Rltpr	intron	ENSMUSG00000050357	NonProperStrand	22	1	-14.4417
chr2	130101996	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	chr5	111121071	111121192	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	3	-0.9284
chr4	53551325	53554182	protein_coding	Slc44a1	exon	ENSMUSG00000028412	ProperStrand	38	chr9	15119706	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.4482
chr17	47840037	47840137	protein_coding	Frs3	exon	ENSMUSG00000023266	ProperStrand	11	chr3	104023982	104023998	protein_coding	Magi3	utr5	ENSMUSG00000052539	ProperStrand	19	1	-18.7445
chr1	183853951	183860819	protein_coding	Enah	exon	ENSMUSG00000022995	ProperStrand	196	chr7	118219574	118219606	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-2.0663
chr17	34720408	34720498	protein_coding	Notch4	exon	ENSMUSG00000015468	ProperStrand	11	chr12	88778643	88778723	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-9.9385
chr2	92440278	92440296	protein_coding	Chst1	utr5	ENSMUSG00000027221	ProperStrand	17	chr4	131908236	131908279	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.5556
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr13	28653437	28843562	lincRNA	2610307P16Rik	exon	ENSMUSG00000085936	ProperStrand	154	3	-15.4781
chr9	78023109	78023157	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr8	98270035	98270096	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	7	-3.1556
chr11	51464192	51464208	protein_coding	N4bp3	utr5	ENSMUSG00000001053	NonProperStrand	41	chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	1	-9.5948
chr7	29598994	29599040	protein_coding	Hnrnpl	exon	ENSMUSG00000015165	ProperStrand	150	chr7	117189937	117189991	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	3	-4.9910
chr13	100741794	100746382	protein_coding	Mccc2	exon	ENSMUSG00000021646	ProperStrand	29	chr8	91555766	91555866	protein_coding	Sall1	exon	ENSMUSG00000031665	ProperStrand	96	1	-13.8431
chr6	115757832	115758717	protein_coding	Rpl32	utr5	ENSMUSG00000057841	ProperStrand	137	chr9	120038566	120038646	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.6627
chr3	19957903	19957920	protein_coding	Hltf	utr5	ENSMUSG00000002428	ProperStrand	24	chr4	116828377	116828453	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-10.2320
chr1	9536530	9536546	protein_coding	Rrs1	exon	ENSMUSG00000061024	ProperStrand	18	chr16	23110961	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7867
chr2	154519889	154519905	protein_coding	Chmp4b	utr3	ENSMUSG00000038467	NonProperStrand	1	chrX	103397843	103397907	protein_coding	Pgk1	exon	ENSMUSG00000062070	ProperStrand	484	1	-inf
chr11	82110110	82110127	protein_coding	Ccl1	intron	ENSMUSG00000020702	NonProperStrand	9	chr15	98356790	98356811	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	1	-11.6318
chr13	9833551	9833669	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr15	79908932	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	14	-5.9420
chr7	145843126	145843216	LINE	L1ME2	L1	chr7L1ME2145843062	ProperStrand	1	chr7	145843521	145843601	LTR	MERVL_2A-int	ERVL	chr7MERVL_2A-int145843345	ProperStrand	1	1	-inf
chr17	37147285	37147310	protein_coding	Zfp57	exon	ENSMUSG00000036036	ProperStrand	39	chr10	23505152	23505218	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.8710
chr11	100766936	100766970	protein_coding	Stat3	exon	ENSMUSG00000004040	ProperStrand	20	chr14	76247754	76247836	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-6.3209
chr1	133252344	133252393	protein_coding	Srgap2	intron	ENSMUSG00000026425	ProperStrand	299	chr2	26493390	26493490	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-1.1078
chr18	10052132	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr10	6063959	6063978	protein_coding	Akap12	intron	ENSMUSG00000038587	ProperStrand	1008	1	-3.3249
chr8	125411276	125414595	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	chr11	69481332	69481427	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-1.1142
chr4	108686443	108690496	protein_coding	Nrd1	exon	ENSMUSG00000053510	ProperStrand	76	chr11	6428033	6428123	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.7712
chr1	181476981	181476997	protein_coding	Cnst	intron	ENSMUSG00000038949	ProperStrand	40	chr11	6428077	6428156	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-6.6500
chr18	39835199	39835279	LTR	MTD	MaLR	chr18MTD39835132	NonProperStrand	1	chr18	39834963	39835053	SINE	PB1D10	Alu	chr18PB1D1039834959	ProperStrand	1	1	-inf
chr18	58069903	58069993	protein_coding	Slc12a2	exon	ENSMUSG00000024597	ProperStrand	20	chr17	24857750	24857830	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.2966
chr12	52849618	52849634	protein_coding	Hectd1	exon	ENSMUSG00000035247	NonProperStrand	43	chr8	108379965	108380034	protein_coding	Thap11	exon	ENSMUSG00000036442	ProperStrand	34	1	-15.1377
chr15	99611516	99611612	protein_coding	Lima1	exon	ENSMUSG00000023022	ProperStrand	159	chr6	38457453	38457471	protein_coding	Ubn2	utr3	ENSMUSG00000038538	ProperStrand	86	1	-10.6341
chr17	33066837	33066892	protein_coding	Cyp4f13	exon	ENSMUSG00000024055	ProperStrand	4	chr17	24857794	24857852	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-12.7746
chr5	120133190	120133215	protein_coding	Tbx3	utr3	ENSMUSG00000018604	ProperStrand	87	chr16	23109055	23109090	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-6.5447
chr12	110888916	110888948	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr11	103043025	103043042	protein_coding	Fmnl1	exon	ENSMUSG00000055805	ProperStrand	26	1	-10.3541
chr9	15063138	15063197	protein_coding	2200002K05Rik	utr3	ENSMUSG00000031937	ProperStrand	22	chr15	75449395	75449430	protein_coding	Zfp41	utr3	ENSMUSG00000047003	ProperStrand	9	2	-inf
chr14	45949538	45963148	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	chr9	15119631	15119729	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-1.5173
chr18	78017486	78017576	protein_coding	Atp5a1	exon	ENSMUSG00000025428	ProperStrand	254	chr2	26494738	26494818	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	9	-13.0089
chr4	140121137	140121153	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	chr9	15118281	15118322	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-2.0444
chr5	124451026	124451219	protein_coding	Hip1r	exon	ENSMUSG00000000915	ProperStrand	31	chr7	4436238	4436328	protein_coding	Ppp1r12c	exon	ENSMUSG00000019254	ProperStrand	15	4	-19.7167
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr7	118219576	118219610	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-0.9398
chr10	125433751	125434125	protein_coding	Lrig3	exon	ENSMUSG00000020105	ProperStrand	40	chr15	76437832	76437892	protein_coding	Cpsf1	exon	ENSMUSG00000034022	ProperStrand	127	1	-12.6274
chr6	134029351	134029368	protein_coding	Etv6	intron	ENSMUSG00000030199	ProperStrand	46	chr7	117189863	117189914	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-6.7358
chr4	118034536	118034553	protein_coding	Hyi	exon	ENSMUSG00000006395	NonProperStrand	5	chr4	149613651	149615161	protein_coding	Eno1	exon	ENSMUSG00000063524	ProperStrand	432	1	-14.5213
chr13	64468376	64469226	protein_coding	Ctsl	exon	ENSMUSG00000021477	ProperStrand	44	chr5	65387137	65397052	protein_coding	Fam114a1	exon	ENSMUSG00000029185	ProperStrand	7	2	-inf
chr2	121260545	121260625	protein_coding	Pdia3	exon	ENSMUSG00000027248	ProperStrand	74	chr11	69483136	69483231	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	8	-18.5862
chr8	125863687	125863714	protein_coding	Spire2	intron	ENSMUSG00000010154	ProperStrand	7	chr4	131865856	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.7768
chr1	34327837	34328223	protein_coding	Dst	exon	ENSMUSG00000026131	ProperStrand	461	chr7	52378398	52378461	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	5	-17.8470
chr18	68028105	68028140	protein_coding	Cep192	exon	ENSMUSG00000024542	ProperStrand	59	chr3	57450646	57450662	protein_coding	Commd2	exon	ENSMUSG00000036513	ProperStrand	23	1	-15.2692
chrX	155989786	155989805	protein_coding	A830080D01Rik	exon	ENSMUSG00000044150	ProperStrand	102	chr9	15119631	15119711	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.7571
chr7	133691341	133691388	protein_coding	Eif3c	exon	ENSMUSG00000030738	ProperStrand	92	chr7	54110474	54110560	protein_coding	Ldha	utr3	ENSMUSG00000063229	ProperStrand	280	6	-inf
chr5	115538884	115538952	protein_coding	Sppl3	exon	ENSMUSG00000029550	ProperStrand	33	chr3	123210854	123210885	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-7.9321
chr6	129628834	129628851	protein_coding	Klrc1	exon	ENSMUSG00000030167	NonProperStrand	49	chr5	112851741	112851759	protein_coding	Sez6l	intron	ENSMUSG00000058153	ProperStrand	81	1	-13.1223
chr2	5817833	5817859	protein_coding	Dhtkd1	utr3	ENSMUSG00000025815	ProperStrand	46	chr7	116664872	116664924	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.0158
chr11	98665720	98666212	protein_coding	Msl1	exon	ENSMUSG00000052915	ProperStrand	8	chr3	123210858	123210919	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-9.7482
chr5	100855902	100855943	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr8	46038559	46038659	protein_coding	Fat1	exon	ENSMUSG00000070047	ProperStrand	306	1	-3.5073
chr12	111863962	111864142	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr14	31827478	31827517	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-2.4571
chr12	77883981	77884021	protein_coding	Churc1	utr3	ENSMUSG00000090258	ProperStrand	3	chr11	68887021	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	2	-17.2984
chr5	86548414	86549558	protein_coding	Uba6	exon	ENSMUSG00000035898	ProperStrand	17	chr16	23110965	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.8783
chr6	134381927	134381950	protein_coding	Bcl2l14	intron	ENSMUSG00000030200	ProperStrand	5	chr4	131865856	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-6.5022
chr14	66093251	66093268	LTR	MLT1A1	MaLR	chr14MLT1A166093179	ProperStrand	31	chr11	107237381	107237437	protein_coding	Pitpnc1	intron	ENSMUSG00000040430	ProperStrand	46	1	-15.1841
chr7	52713347	52714533	protein_coding	Ftl1	utr3	ENSMUSG00000050708	ProperStrand	807	chr18	33954817	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	3	-0.7135
chr15	102844825	102844841	protein_coding	Hoxc5	exon	ENSMUSG00000022485	ProperStrand	40	chr9	15119335	15119372	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-5.9028
chrX	147476948	147476965	SINE	RSINE1	B4	chrXRSINE1147476844	NonProperStrand	20	chr1	180336306	180336324	protein_coding	Efcab2	intron	ENSMUSG00000026495	ProperStrand	4	1	-20.2991
chr5	34894211	34894227	protein_coding	Sh3bp2	utr5	ENSMUSG00000054520	ProperStrand	43	chr15	101919183	101919313	protein_coding	Eif4b	exon	ENSMUSG00000058655	ProperStrand	484	1	-9.8038
chr1	89673521	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	chr1	89681148	89681396	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	51	-inf
chr4	43943351	43943367	protein_coding	Reck	intron	ENSMUSG00000028476	NonProperStrand	36	chr3	68889191	68889241	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-4.2090
chr4	122968595	122968685	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	chr16	38158134	38158214	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	6	-12.1668
chr19	41634867	41634905	protein_coding	Lcor	utr3	ENSMUSG00000025019	ProperStrand	17	chr10	23505152	23505252	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-14.8995
chr7	52071775	52071795	protein_coding	Il4i1	utr5	ENSMUSG00000074141	ProperStrand	12	chr1	162966190	162966239	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-10.8479
chr3	89751826	89751999	protein_coding	Atp8b2	exon	ENSMUSG00000060671	ProperStrand	140	chr11	83107840	83107903	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	1	-7.1471
chr1	120574219	120574258	protein_coding	Tfcp2l1	utr3	ENSMUSG00000026380	ProperStrand	158	chr19	8798749	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-2.9982
chr1	155319840	155320295	protein_coding	Dhx9	exon	ENSMUSG00000042699	ProperStrand	98	chr11	6428077	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.3351
chr13	96121137	96121174	protein_coding	Aggf1	utr3	ENSMUSG00000021681	ProperStrand	10	chr2	84198822	84198839	protein_coding	Calcrl	intron	ENSMUSG00000059588	ProperStrand	25	1	-18.4982
chr2	121949510	121949527	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-2.2006
chr10	6366158	6367825	protein_coding	Mthfd1l	exon	ENSMUSG00000040675	ProperStrand	50	chr7	148634801	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	4	-13.8969
chr9	64022854	64022923	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	chr4	122970443	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	2	-4.2519
chr9	63868722	63868739	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	chr7	52713411	52713507	protein_coding	Ftl1	utr3	ENSMUSG00000050708	ProperStrand	807	1	-3.5337
chrX	7445082	7445115	protein_coding	Otud5	exon	ENSMUSG00000031154	ProperStrand	79	chr11	120148960	120148976	protein_coding	Bahcc1	exon	ENSMUSG00000039741	NonProperStrand	268	1	-9.7606
chr1	72898627	72898681	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	chr11	63885336	63887052	protein_coding	Cox10	exon	ENSMUSG00000042148	NonProperStrand	187	1	-7.2165
chr15	76528759	76528900	protein_coding	Gpt	exon	ENSMUSG00000022546	ProperStrand	3	chr16	23110913	23110940	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr2	28368857	28368876	protein_coding	Ralgds	utr5	ENSMUSG00000026821	NonProperStrand	60	chr13	104902156	104902176	protein_coding	Sgtb	intron	ENSMUSG00000042743	ProperStrand	60	1	-13.3156
chr4	117317816	117317906	protein_coding	Eri3	intron	ENSMUSG00000033423	ProperStrand	246	chr15	5068407	5068449	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	7	-20.3023
chr8	100099081	100099097	LTR	MER21B	ERV1	chr8MER21B100099024	NonProperStrand	1	chr7	52382805	52382853	protein_coding	Rpl13a	intron	ENSMUSG00000074129	ProperStrand	269	1	-inf
chr5	111218398	111218420	protein_coding	Ulk1	exon	ENSMUSG00000029512	ProperStrand	92	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.8204
chr14	58669621	58669640	LINE	Lx8	L1	chr14Lx858669508	ProperStrand	1	chr7	117166721	117166806	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	NonProperStrand	4	1	-inf
chr8	73173857	73173889	protein_coding	Pgpep1	utr3	ENSMUSG00000056204	ProperStrand	12	chr16	23111694	23111784	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-15.7810
chr9	69335876	69335905	protein_coding	Anxa2	exon	ENSMUSG00000032231	ProperStrand	43	chr8	98269959	98270083	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	3	-14.2487
chr11	19963475	19963521	protein_coding	Actr2	utr3	ENSMUSG00000020152	ProperStrand	72	chr11	106362674	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-7.0417
chr10	127521050	127521372	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr1	89681333	89681396	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-1.3474
chr6	113118507	113118525	protein_coding	Lhfpl4	utr3	ENSMUSG00000042873	ProperStrand	47	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.6401
chr1	36569310	36569327	protein_coding	Cnnm3	exon	ENSMUSG00000001138	NonProperStrand	1	chr5	130300419	130300516	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-inf
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr4	131865379	131865500	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	10	-9.7251
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr5	74489544	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	9	-3.6001
chr7	37553887	37553999	protein_coding	Tshz3	exon	ENSMUSG00000021217	ProperStrand	16	chr16	23110981	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-13.3312
chr6	124761259	124761300	protein_coding	Tpi1	utr3	ENSMUSG00000023456	ProperStrand	94	chr9	32064308	32064382	protein_coding	Arhgap32	exon	ENSMUSG00000041444	ProperStrand	37	1	-13.3867
chr2	157115271	157116274	protein_coding	Rpn2	exon	ENSMUSG00000027642	ProperStrand	363	chr9	15119666	15119746	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	12	-12.4104
chr12	60575476	60575494	LINE	L1_Mus4	L1	chr12L1_Mus460575423	ProperStrand	33	chr17	24857795	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.3507
chr1	162967707	162967787	non_coding	Gas5	.	ENSMUSG00000053332	ProperStrand	144	chr17	35299513	35299603	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-3.1417
chr6	87769189	87769558	protein_coding	Isy1	exon	ENSMUSG00000030056	ProperStrand	172	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-5.1345
chr13	34978666	34978682	protein_coding	Prpf4b	exon	ENSMUSG00000021413	ProperStrand	50	chr2	144087323	144087425	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	3	-15.6606
chr14	75730624	75730714	protein_coding	Zc3h13	exon	ENSMUSG00000022000	ProperStrand	42	chr7	125988828	125988908	protein_coding	2310008H09Rik	utr3	ENSMUSG00000030980	ProperStrand	42	1	-14.7446
chr4	104151753	104151770	protein_coding	Dab1	utr5	ENSMUSG00000028519	NonProperStrand	26	chr16	23111372	23111445	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.5788
chr6	83111671	83111687	protein_coding	1700003E16Rik	exon	ENSMUSG00000030030	ProperStrand	352	chr4	116827148	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-3.6248
chr5	149860291	149860310	protein_coding	Hmgb1	utr3	ENSMUSG00000066551	ProperStrand	99	chr9	120038616	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.1764
chr4	43505731	43505821	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr8	72821882	72822039	protein_coding	Ddx49	exon	ENSMUSG00000057788	ProperStrand	68	1	-2.8476
chr2	167276365	167276491	protein_coding	Slc9a8	intron	ENSMUSG00000039463	ProperStrand	26	chr9	20695247	20695273	snoRNA	ENSMUSG00000089571_snoU105B	.	ENSMUSG00000089571	ProperStrand	12	2	-20.4356
chr11	4820972	4820990	protein_coding	Thoc5	intron	ENSMUSG00000034274	ProperStrand	325	chr7	67125759	67125831	snoRNA	ENSMUSG00000089375_Snord107	.	ENSMUSG00000089375	ProperStrand	451	1	-5.9222
chr11	69555358	69555423	protein_coding	Polr2a	exon	ENSMUSG00000005198	ProperStrand	200	chr5	108334263	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	7	-17.4246
chr6	122687224	122687278	protein_coding	Slc2a3	exon	ENSMUSG00000003153	ProperStrand	682	chr17	56915421	56915437	protein_coding	Rfx2	utr3	ENSMUSG00000024206	NonProperStrand	9	1	-12.3333
chr14	55058807	55059217	protein_coding	Mmp14	exon	ENSMUSG00000000957	ProperStrand	61	chr15	34370597	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-3.5187
chr10	62271826	62302922	protein_coding	Tet1	utr3	ENSMUSG00000047146	ProperStrand	286	chr19	8798505	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	5	-10.9943
chr11	80415108	80415239	protein_coding	Myo1d	exon	ENSMUSG00000035441	ProperStrand	144	chr4	131865855	131865927	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.3272
chr5	108761730	108761747	protein_coding	Pigg	exon	ENSMUSG00000029263	ProperStrand	11	chr8	129468745	129468872	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-7.7956
chr3	27138560	27140147	protein_coding	Nceh1	exon	ENSMUSG00000027698	ProperStrand	13	chr12	17552950	17553030	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-8.1509
chr14	20587521	20587611	protein_coding	Nid2	exon	ENSMUSG00000021806	ProperStrand	372	chr19	8800373	8800453	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-0.7116
chr2	59655698	59658293	protein_coding	Tanc1	exon	ENSMUSG00000035168	ProperStrand	80	chr11	62416625	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-7.6512
chr9	15119246	15119336	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	chrX	34622957	34623037	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-1.1637
chr4	101331051	101331100	protein_coding	Leprot	utr3	ENSMUSG00000035212	ProperStrand	22	chr1	63225596	63225686	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-8.6827
chr11	3870673	3876803	protein_coding	Pes1	exon	ENSMUSG00000020430	ProperStrand	49	chrX	34622906	34623021	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-6.0294
chr7	146074603	146074633	protein_coding	Ppp2r2d	utr3	ENSMUSG00000041769	ProperStrand	62	chr5	130300477	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-4.3381
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr7	116593695	116593711	protein_coding	Trim66	utr3	ENSMUSG00000031026	ProperStrand	7	1	-12.2125
chr3	133129463	133129495	protein_coding	Tet2	utr3	ENSMUSG00000040943	ProperStrand	192	chr5	130300444	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-2.7131
chr6	120843793	120843812	protein_coding	Bid	utr3	ENSMUSG00000004446	NonProperStrand	3	chr15	98604924	98606960	protein_coding	Wnt10b	exon	ENSMUSG00000022996	NonProperStrand	189	1	-17.4514
chr9	120039532	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	chr19	44188465	44188587	snoRNA	ENSMUSG00000077391_SNORA12	.	ENSMUSG00000077391	ProperStrand	506	3	-1.4033
chr11	50013953	50014006	protein_coding	Sqstm1	utr3	ENSMUSG00000015837	ProperStrand	36	chr1	154309770	154309788	protein_coding	Glt25d2	intron	ENSMUSG00000032649	NonProperStrand	2	1	-inf
chr1	55135125	55135183	protein_coding	Hspd1	utr3	ENSMUSG00000025980	ProperStrand	140	chr1	162965536	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.8323
chr1	135972870	135972901	protein_coding	Btg2	utr3	ENSMUSG00000020423	ProperStrand	5	chr3	116126898	116126914	protein_coding	Cdc14a	utr5	ENSMUSG00000033502	ProperStrand	29	1	-inf
chr17	34072906	34072923	protein_coding	Rgl2	exon	ENSMUSG00000041354	NonProperStrand	5	chr9	120038466	120038495	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-8.0049
chr19	9051900	9052079	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	chr18	35716808	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	6	-2.2551
chr6	121604613	121607447	protein_coding	A2m	exon	ENSMUSG00000030111	ProperStrand	17	chr9	120038467	120038529	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.4412
chr5	102344475	102344491	protein_coding	Wdfy3	utr3	ENSMUSG00000043940	NonProperStrand	10	chr9	120039533	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-11.1496
chr4	106472505	106472522	protein_coding	Acot11	intron	ENSMUSG00000034853	ProperStrand	61	chrX	53609291	53609309	protein_coding	Zfp449	intron	ENSMUSG00000073176	NonProperStrand	7	1	-17.7664
chr2	30251206	30251248	protein_coding	Dolpp1	exon	ENSMUSG00000026856	ProperStrand	13	chr12	55835612	55835702	snRNA	ENSMUSG00000075960_U1	.	ENSMUSG00000075960	ProperStrand	210	8	-inf
chr1	135556290	135556315	protein_coding	Zc3h11a	intron	ENSMUSG00000026464	ProperStrand	102	chr5	74489595	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-2.8155
chr10	127523462	127525385	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr12	17552950	17553040	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	4	-4.9205
chr9	88375583	88376916	protein_coding	Syncrip	utr5	ENSMUSG00000032423	ProperStrand	35	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-8.8214
chr4	53873613	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	chr17	24665421	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	2	-2.3944
chr4	134878380	134900457	protein_coding	Srrm1	exon	ENSMUSG00000028809	ProperStrand	142	chr10	23505152	23505271	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	10	-9.7954
chr19	8971751	8971851	protein_coding	Ints5	exon	ENSMUSG00000071652	ProperStrand	6	chr7	118219574	118219604	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-8.8290
chr5	34693888	34693954	protein_coding	Rnf4	exon	ENSMUSG00000029110	ProperStrand	27	chrX	152009278	152009294	protein_coding	Ptchd1	exon	ENSMUSG00000041552	NonProperStrand	294	1	-11.7430
chr17	13184993	13185013	protein_coding	Wtap	utr5	ENSMUSG00000060475	ProperStrand	119	chr7	30041483	30041595	protein_coding	Spint2	utr3	ENSMUSG00000074227	ProperStrand	82	4	-20.5679
chr9	110544350	110544366	protein_coding	Nbeal2	exon	ENSMUSG00000056724	ProperStrand	161	chr9	120039622	120039658	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.6538
chr14	73960317	73960345	protein_coding	Sucla2	utr5	ENSMUSG00000022110	ProperStrand	20	chr11	106362337	106362381	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-8.0393
chr17	24730827	24730869	protein_coding	Pkd1	exon	ENSMUSG00000032855	ProperStrand	61	chr2	130102059	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	2	-8.7381
chr10	107294045	107294061	protein_coding	Otogl	exon	ENSMUSG00000091455	NonProperStrand	8	chr18	35714144	35714263	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-7.4301
chr8	98247196	98278977	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	chr4	131908718	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	8	-2.1289
chrX	166417333	166417357	protein_coding	Mid1	intron	ENSMUSG00000035299	ProperStrand	209	chr1	162965980	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	3	-4.3641
chr7	36624700	36624716	LTR	ORR1D1	MaLR	chr7ORR1D136624516	NonProperStrand	6	chr5	64519289	64519340	protein_coding	Pgm1	utr3	ENSMUSG00000029171	ProperStrand	7	1	-19.6825
chr11	94530109	94530758	protein_coding	Xylt2	exon	ENSMUSG00000020868	ProperStrand	65	chr16	23111447	23111492	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.1508
chr18	36447932	36447957	protein_coding	Pura	utr3	ENSMUSG00000043991	ProperStrand	20	chr16	23111370	23111446	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.0472
chr2	32563527	32563545	protein_coding	Cdk9	exon	ENSMUSG00000009555	NonProperStrand	49	chr11	113423607	113423624	protein_coding	Slc39a11	intron	ENSMUSG00000041654	NonProperStrand	39	1	-14.5908
chr13	98263451	98263551	lincRNA	Gm11019	intron	ENSMUSG00000078952	ProperStrand	113	chr8	98297533	98298549	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	1	-8.7221
chr8	13123597	13123613	protein_coding	Cul4a	exon	ENSMUSG00000031446	ProperStrand	36	chr14	33005138	33005163	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-4.9721
chr19	8816589	8816606	protein_coding	Stx5a	utr5	ENSMUSG00000010110	NonProperStrand	1	chr5	121655099	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-inf
chr13	21871881	21871897	protein_coding	Hist1h1b	exon	ENSMUSG00000058773	ProperStrand	65	chr5	108336362	108336450	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-4.7267
chr17	85482653	85489599	protein_coding	Prepl	utr5	ENSMUSG00000024127	ProperStrand	106	chr8	90723449	90723512	protein_coding	Papd5	intron	ENSMUSG00000036779	ProperStrand	32	1	-13.4403
chr2	158451026	158451043	protein_coding	Actr5	exon	ENSMUSG00000037761	NonProperStrand	94	chr10	31328217	31328236	protein_coding	Rnf217	exon	ENSMUSG00000063760	ProperStrand	33	1	-13.6137
chr7	26510980	26511080	protein_coding	Hnrnpul1	exon	ENSMUSG00000040725	ProperStrand	84	chr2	145076803	145209251	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-7.0537
chr2	179906911	179907586	protein_coding	Adrm1	exon	ENSMUSG00000039041	ProperStrand	27	chr3	95980321	95980410	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	4	-23.5029
chr11	62951997	62952014	protein_coding	Pmp22	intron	ENSMUSG00000018217	NonProperStrand	40	chr10	80642908	80642988	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-6.9031
chr15	36538316	36538416	protein_coding	Pabpc1	utr5	ENSMUSG00000022283	ProperStrand	908	chr17	35088957	35089012	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-1.1111
chr9	15119630	15119754	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	chr12	110923174	110923231	snoRNA	ENSMUSG00000084487_SNORD113	.	ENSMUSG00000084487	ProperStrand	183	11	-17.9400
chr3	66879375	66879391	protein_coding	Rsrc1	intron	ENSMUSG00000034544	NonProperStrand	71	chr2	32881629	32881645	protein_coding	Garnl3	exon	ENSMUSG00000038860	NonProperStrand	54	1	-13.1900
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr16	17210492	17210512	protein_coding	Rimbp3	exon	ENSMUSG00000071636	ProperStrand	67	1	-4.2526
chr4	132530097	132530117	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	chr5	74489587	74489677	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	2	-1.6788
chr11	116543053	116543143	protein_coding-noncoding	St6galnac2	utr3	ENSMUSG00000057286	ProperStrand	1	chr7	134671413	134671493	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-inf
chr2	90235285	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	69161947	69161964	protein_coding	Chd3	exon	ENSMUSG00000018474	ProperStrand	438	1	-1.1109
chr5	118477951	118477967	protein_coding	Tesc	exon	ENSMUSG00000029359	ProperStrand	114	chr5	130300432	130300493	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.4854
chr11	48619101	48619148	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-5.8874
chr6	119524997	119525057	protein_coding	Erc1	utr3	ENSMUSG00000030172	ProperStrand	69	chr10	110918636	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-3.1941
chr10	58396806	58396886	protein_coding	Sh3rf3	intron	ENSMUSG00000037990	NonProperStrand	9	chr10	58441778	58441868	protein_coding	Sh3rf3	intron	ENSMUSG00000037990	ProperStrand	18	1	-18.6028
chr12	27874148	27874164	LTR	ORR1E	MaLR	chr12ORR1E27874117	NonProperStrand	27	mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	1	-7.4937
chr9	100966289	100966307	SINE	B4A	B4	chr9B4A100966214	ProperStrand	51	chr2	89368462	89368479	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	1	-10.6856
chr11	60534203	60534245	protein_coding	Flii	exon	ENSMUSG00000002812	ProperStrand	42	chr7	148634705	148634795	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-7.7508
chr3	95634854	95636504	protein_coding	Prpf3	exon	ENSMUSG00000015748	ProperStrand	29	chr16	23110555	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-9.3522
chr8	109128224	109128292	protein_coding	Cdh1	exon	ENSMUSG00000000303	ProperStrand	283	chr17	30772308	30772324	protein_coding	Dnahc8	utr5	ENSMUSG00000033826	ProperStrand	246	1	-7.3875
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr1	9535572	9535593	protein_coding	Rrs1	utr5	ENSMUSG00000061024	ProperStrand	18	1	-9.3517
chr8	109185922	109187672	protein_coding	Cdh1	exon	ENSMUSG00000000303	ProperStrand	283	chr11	97641452	97641524	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	1	-4.8108
chr19	23288649	23289139	protein_coding	Smc5	exon	ENSMUSG00000024943	ProperStrand	146	chr18	35714144	35714244	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-1.9104
chrX	70904605	70904627	protein_coding	Pnck	utr5	ENSMUSG00000002012	ProperStrand	10	chr10	42194964	42194984	protein_coding	Lace1	intron	ENSMUSG00000038302	ProperStrand	12	1	-21.0058
chr19	37292223	37292239	protein_coding	March5	intron	ENSMUSG00000023307	ProperStrand	17	chr8	34802358	34802410	snoRNA	ENSMUSG00000088856_SNORA48	.	ENSMUSG00000088856	ProperStrand	236	1	-13.1284
chr16	20123230	20123270	protein_coding	Klhl24	utr3	ENSMUSG00000062901	ProperStrand	212	chr9	120039543	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	7	-11.2140
chr15	64309170	64309188	LINE	L1MB8	L1	chr15L1MB864308791	NonProperStrand	2	chr19	8799830	8799902	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-12.3459
chr19	32152084	32152174	LINE	L1_Mur3	L1	chr19L1_Mur332150803	NonProperStrand	1	chr19	32152463	32152543	LTR	RMER13A	ERVK	chr19RMER13A32152252	NonProperStrand	1	1	-inf
chr5	143830054	143830577	protein_coding	Rnf216	exon	ENSMUSG00000045078	ProperStrand	38	chr4	131908688	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.9012
chr13	88569462	88569482	LTR	RMER6D	ERVK	chr13RMER6D88569354	ProperStrand	42	chr2	26494710	26494800	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.7619
chr11	61324962	61325052	protein_coding	B9d1	intron	ENSMUSG00000001039	ProperStrand	3	chr12	106269345	106269425	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	3	-inf
chr6	125080125	125080225	protein_coding	Chd4	utr3	ENSMUSG00000063870	ProperStrand	303	chr10	127521200	127521270	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	1	-5.5891
chr1	20552542	20552558	protein_coding	Pkhd1	exon	ENSMUSG00000043760	NonProperStrand	49	chr17	63211482	63211498	protein_coding	Efna5	intron	ENSMUSG00000048915	NonProperStrand	32	1	-14.9998
chr9	44192243	44192322	protein_coding	Hyou1	exon	ENSMUSG00000032115	ProperStrand	145	chr18	35716749	35716839	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-0.8959
chr4	86222447	86222505	protein_coding	Rraga	exon	ENSMUSG00000070934	ProperStrand	13	chr16	23110911	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-9.0805
chr9	114538174	114538204	protein_coding	Cnot10	exon	ENSMUSG00000056167	ProperStrand	16	chr10	90581034	90581127	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	2	-11.9941
chr11	3426352	3430040	protein_coding	Smtn	exon	ENSMUSG00000020439	ProperStrand	222	chr7	117189955	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-2.3196
chr17	24832801	24832891	protein_coding	Gfer	exon	ENSMUSG00000040888	ProperStrand	2	chr9	120039583	120039663	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-10.6072
chr2	26493413	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr7	108971290	108971306	protein_coding	Inppl1	utr3	ENSMUSG00000032737	ProperStrand	272	1	-3.3112
chr2	83602058	83603842	protein_coding	Itgav	exon	ENSMUSG00000027087	ProperStrand	59	chr9	15119635	15119736	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	6	-15.0767
chr11	105451162	105451220	Low_complexity	GC_rich	Low_complexity	chr11GC_rich105451020	ProperStrand	1	chr15	76289530	76289547	protein_coding	Scx	exon	ENSMUSG00000034161	ProperStrand	7	1	-inf
chr7	135048760	135048919	protein_coding	Bckdk	exon	ENSMUSG00000030802	ProperStrand	26	chr7	148418394	148423439	protein_coding	Phrf1	exon	ENSMUSG00000038611	ProperStrand	86	2	-20.4168
chr5	74489216	74489324	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr7	127979002	127979023	tRNA	tRNA861-LeuTAG	.	404810	ProperStrand	49	1	-6.0200
chrX	20270472	20270565	protein_coding	Cdk16	utr5	ENSMUSG00000031065	ProperStrand	30	chr1	162966853	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-7.6411
chr5	92483354	92483374	protein_coding	G3bp2	utr3	ENSMUSG00000029405	ProperStrand	78	chr9	15118245	15118321	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	3	-7.6396
chr3	89034404	89034420	protein_coding	Muc1	exon	ENSMUSG00000042784	ProperStrand	4	chr12	16946800	16946929	snoRNA	ENSMUSG00000064620_SNORA32	.	ENSMUSG00000064620	ProperStrand	165	1	-16.8689
chr19	44188489	44188546	snoRNA	ENSMUSG00000077391_SNORA12	.	ENSMUSG00000077391	ProperStrand	506	chr18	35714208	35714257	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-0.8733
chr2	31657970	31658005	protein_coding	Abl1	utr3	ENSMUSG00000090901	ProperStrand	15	chr7	117189900	117189933	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	12	-21.8821
chr14	57312831	57312871	protein_coding	Mphosph8	intron	ENSMUSG00000079184	NonProperStrand	27	chr17	24857782	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-6.3347
chr1	88252857	88252897	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	chr11	106874228	106874253	tRNA	tRNA945-ArgCCG	.	87961	ProperStrand	133	1	-5.0811
chr7	129133231	129133278	protein_coding	Gga2	exon	ENSMUSG00000030872	ProperStrand	65	chr8	73419657	73419715	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-5.1675
chr9	24278286	24278309	protein_coding	Dpy19l1	exon	ENSMUSG00000043067	ProperStrand	24	chr5	121655016	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.5126
chr12	4636734	4637478	protein_coding	Itsn2	exon	ENSMUSG00000020640	ProperStrand	33	chr3	123210861	123210961	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.0977
chr11	60609555	60609629	protein_coding	Shmt1	intron	ENSMUSG00000020534	ProperStrand	60	chr4	131908754	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-3.7682
chr18	82773672	82773688	protein_coding	Zfp236	exon	ENSMUSG00000041258	NonProperStrand	117	chr16	23111372	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-1.0848
chr12	104663677	104663695	protein_coding	Ddx24	intron	ENSMUSG00000041645	NonProperStrand	23	chr8	113362486	113362512	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	1	-11.2049
chr7	30231479	30231579	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	chr19	8963027	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	13	-7.2287
chr10	89179944	89179982	protein_coding	Actr6	exon	ENSMUSG00000019948	ProperStrand	4	chr4	116827121	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	3	-20.8474
chr5	42136455	42136473	Low_complexity	GA-rich	Low_complexity	chr5GA-rich42136449	NonProperStrand	106	chr1	162968441	162968479	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-4.9689
chr9	61762182	61762241	protein_coding	Rplp1	utr5	ENSMUSG00000007892	ProperStrand	116	chr3	33713610	33713626	protein_coding	Ccdc39	exon	ENSMUSG00000027676	ProperStrand	106	1	-10.8462
chr9	37457071	37457698	protein_coding	Tbrg1	exon	ENSMUSG00000011114	ProperStrand	56	chr4	131908236	131908276	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.5191
chr8	72334599	72334615	protein_coding	Gmip	exon	ENSMUSG00000036246	ProperStrand	102	chr12	76768399	76768447	protein_coding	Wdr89	intron	ENSMUSG00000045690	ProperStrand	7	1	-16.7044
chr19	55700344	55700363	protein_coding	Vti1a	utr3	ENSMUSG00000024983	ProperStrand	14	chr8	10369353	10369369	protein_coding	Myo16	exon	ENSMUSG00000039057	NonProperStrand	45	1	-16.9247
chr1	137271110	137271126	protein_coding	Shisa4	exon	ENSMUSG00000041889	ProperStrand	64	chr17	35089232	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-5.3592
chr3	87905915	87905931	protein_coding	Iqgap3	exon	ENSMUSG00000028068	NonProperStrand	3	chr18	35716684	35716734	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-8.1910
chr17	69597977	69598003	protein_coding	Epb4.1l3	exon	ENSMUSG00000024044	ProperStrand	28	chr6	96322858	96322874	protein_coding	Fam19a1	intron	ENSMUSG00000059187	NonProperStrand	60	1	-14.8589
chr2	90235306	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr3	84033125	84033143	protein_coding	Trim2	intron	ENSMUSG00000027993	ProperStrand	10	1	-8.0457
chr13	64469494	64470386	protein_coding	Ctsl	exon	ENSMUSG00000021477	ProperStrand	44	chr19	8798767	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-5.4038
chr2	32617379	32617491	protein_coding	Ttc16	intron	ENSMUSG00000039021	ProperStrand	12	chr1	162968491	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	10	-inf
chr14	76245139	76245175	protein_coding	Tpt1	utr5	ENSMUSG00000060126	ProperStrand	236	chr15	79908930	79909012	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-2.9038
chr1	60144946	60146116	protein_coding	Wdr12	exon	ENSMUSG00000026019	ProperStrand	36	chr13	23647416	23647447	protein_coding	Hist1h1d	exon	ENSMUSG00000052565	ProperStrand	78	1	-13.8213
chr14	57312831	57312921	protein_coding	Mphosph8	intron	ENSMUSG00000079184	NonProperStrand	27	chr2	26493416	26493496	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-8.6950
chr3	88947277	88948767	protein_coding	Pklr	exon	ENSMUSG00000041237	ProperStrand	5	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-6.0411
chr17	72630714	72630804	protein_coding	Alk	intron	ENSMUSG00000055471	NonProperStrand	17	chr17	14015491	14015571	protein_coding	Mllt4	intron	ENSMUSG00000068036	ProperStrand	156	1	-13.9588
chr3	157569171	157569190	protein_coding	Cth	exon	ENSMUSG00000028179	ProperStrand	14	chr19	8963087	8963165	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.9719
chr5	113919913	113919930	protein_coding	Wscd2	utr5	ENSMUSG00000085571	NonProperStrand	40	chrX	34623018	34623037	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-3.9200
chr7	29243943	29244043	protein_coding	Lrfn1	exon	ENSMUSG00000030600	ProperStrand	19	chr4	131908236	131908293	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.3472
chr4	43505657	43505721	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr9	97000525	97000574	protein_coding	Slc25a36	exon	ENSMUSG00000032449	ProperStrand	159	3	-4.3011
chr16	96224238	96224338	protein_coding	Brwd1	exon	ENSMUSG00000022914	ProperStrand	77	chr7	133695813	133699822	protein_coding	Eif3c	exon	ENSMUSG00000030738	ProperStrand	92	1	-11.9529
chr17	75690723	75690739	protein_coding	Ltbp1	exon	ENSMUSG00000001870	ProperStrand	136	chr7	29136525	29136561	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.1229
chr17	47735894	47735984	protein_coding	Ccnd3	utr3	ENSMUSG00000034165	ProperStrand	58	chr19	8963091	8963171	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.3317
chr14	22489338	22489428	protein_coding	Myst4	exon	ENSMUSG00000021767	ProperStrand	151	chr4	131865413	131865493	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-2.3483
chr4	147385125	147385141	protein_coding	Clcn6	exon	ENSMUSG00000029016	ProperStrand	120	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-7.5429
mmu-miR-2137	0	20	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	chr11	97642952	97643073	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-2.1980
chr17	88039716	88039770	protein_coding	Epcam	exon	ENSMUSG00000045394	ProperStrand	43	chr7	135026220	135026237	protein_coding	Zfp646	exon	ENSMUSG00000049739	ProperStrand	29	1	-15.4873
chr9	88346850	88346950	protein_coding	Syncrip	utr3	ENSMUSG00000032423	ProperStrand	35	chr16	23111750	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	9	-20.3320
chr2	92440278	92440296	protein_coding	Chst1	utr5	ENSMUSG00000027221	ProperStrand	17	chr8	41570003	41570019	protein_coding	Zdhhc2	utr3	ENSMUSG00000039470	NonProperStrand	85	1	-15.1795
chr12	99878411	99878511	protein_coding	Spata7	intron	ENSMUSG00000021007	ProperStrand	6	chr3	120907458	120907476	protein_coding	Tmem56	utr3	ENSMUSG00000028132	ProperStrand	30	1	-18.9879
chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	chr18	35714217	35714291	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-1.2337
chr4	131865394	131865484	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	chr4	132394375	132394462	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	1	-0.7054
chr7	3646364	3646380	protein_coding	Tsen34	exon	ENSMUSG00000035585	ProperStrand	31	chr19	8963031	8963131	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	5	-14.9123
chr5	116011011	116011196	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	chr1	162968476	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	3	-7.7984
chr8	68844335	68844352	protein_coding	March1	intron	ENSMUSG00000036469	ProperStrand	13	chr4	131865400	131865490	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-7.0177
chr4	43505850	43505930	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr4	48632602	48632692	protein_coding	Tmeff1	intron	ENSMUSG00000028347	ProperStrand	47	1	-3.5151
chrX	147520723	147521117	protein_coding	Fgd1	exon	ENSMUSG00000025265	ProperStrand	96	chr11	69483148	69483228	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-3.1175
chr12	88611296	88611386	protein_coding	Ahsa1	exon	ENSMUSG00000021037	ProperStrand	58	chr9	15119346	15119426	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-5.1746
chr7	138053031	138053089	protein_coding-noncoding	Plekha1	utr3	ENSMUSG00000040268	ProperStrand	1	chr10	110918656	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-inf
chr2	103883073	103883139	protein_coding	Fbxo3	exon	ENSMUSG00000027180	ProperStrand	12	chr7	116664795	116664885	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-5.5966
chr11	4793558	4793580	protein_coding	Nipsnap1	utr3	ENSMUSG00000034285	ProperStrand	15	chr4	131908809	131908885	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.5353
chr5	138070460	138070550	protein_coding	Lrch4	exon	ENSMUSG00000093445	ProperStrand	16	chr4	131865906	131865986	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.1079
chr11	74977134	74977234	protein_coding	Smg6	utr3	ENSMUSG00000038290	ProperStrand	29	chr1	162966013	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	3	-11.8482
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr4	122970468	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-1.6071
chr4	124355064	124355144	SINE	B4	B4	chr4B4124355035	NonProperStrand	1	chr16	23110474	23110564	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-inf
chr7	116663748	116663769	protein_coding-noncoding	Rpl27a	utr5	ENSMUSG00000046364	ProperStrand	57	chr4	151494591	151494668	protein_coding	Espn	utr3	ENSMUSG00000028943	ProperStrand	18	1	-15.8253
chr10	114828008	114828032	protein_coding	Zfc3h1	utr5	ENSMUSG00000034163	ProperStrand	58	chr17	13112459	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	7	-21.1576
chr9	46103580	46103599	protein_coding	Bud13	intron	ENSMUSG00000032077	NonProperStrand	1	chr4	131908356	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-inf
chr4	137109642	137109660	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-0.8339
chr3	36414876	36414892	lincRNA	Gm11549	exon	ENSMUSG00000085007	ProperStrand	1	chr16	23111777	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-inf
chr1	63225656	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	chr4	56910554	56910618	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	3	-2.0432
chr4	117811168	117811476	protein_coding	Kdm4a	exon	ENSMUSG00000033326	ProperStrand	81	chr11	62416600	62416657	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-4.5875
chr19	5492652	5492696	protein_coding	Cfl1	exon	ENSMUSG00000056201	ProperStrand	88	chr3	108228259	108228275	protein_coding	Sars	utr3	ENSMUSG00000068739	NonProperStrand	200	1	-10.1289
chr7	28317200	28317300	protein_coding	Pld3	utr3	ENSMUSG00000003363	ProperStrand	8	chr8	73419657	73419729	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-7.0879
chr10	43723884	43723902	protein_coding	Aim1	utr5	ENSMUSG00000019866	ProperStrand	19	chr12	17553033	17553087	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-7.3736
chr15	98673837	98674029	protein_coding	Mll2	exon	ENSMUSG00000048154	ProperStrand	170	chr2	144087324	144087375	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-4.5183
chr15	10924744	10924760	protein_coding	Amacr	exon	ENSMUSG00000022244	ProperStrand	9	chr11	86509126	86510768	protein_coding	Cltc	exon	ENSMUSG00000047126	ProperStrand	319	1	-13.8543
chr8	72322386	72326320	protein_coding	Atp13a1	intron	ENSMUSG00000031862	ProperStrand	75	chr4	131908236	131908414	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-3.4918
chr3	85944554	85944609	snoRNA	ENSMUSG00000064390_Rnu73b	.	ENSMUSG00000064390	ProperStrand	164	chr14	33005138	33005234	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	5	-10.5591
chr4	130477386	130477404	protein_coding	Laptm5	intron	ENSMUSG00000028581	ProperStrand	34	chr4	131908809	131908849	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.0811
chr14	32562292	32562337	protein_coding	Ankrd28	intron	ENSMUSG00000014496	ProperStrand	39	chr1	88886743	88886843	protein_coding	Dis3l2	exon	ENSMUSG00000053333	ProperStrand	20	1	-16.3721
chr9	118468261	118468361	protein_coding	Golga4	exon	ENSMUSG00000038708	ProperStrand	95	chr11	77995189	77995235	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-5.2830
chr13	51743603	51743703	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	chr11	48616641	48616707	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	2	-5.2873
chr7	112782969	112782985	protein_coding	Arfip2	utr3	ENSMUSG00000030881	ProperStrand	191	chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-4.2098
chr2	91436228	91436336	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	chr1	9932550	9932624	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	2	-3.9702
chr7	116663649	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	chr1	59748785	59748811	snoRNA	ENSMUSG00000077345_Snord70	.	ENSMUSG00000077345	ProperStrand	61	4	-8.9966
chr2	90235289	90235345	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr14	31827478	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	5	-1.5971
chr4	131781899	131781949	protein_coding	Gmeb1	exon	ENSMUSG00000028901	ProperStrand	15	chr10	61329160	61330213	protein_coding	Col13a1	exon	ENSMUSG00000058806	ProperStrand	120	1	-14.7446
chr3	104764495	104764511	protein_coding	Wnt2b	utr5	ENSMUSG00000027840	NonProperStrand	50	chr1	74485802	74485877	protein_coding	Usp37	utr3	ENSMUSG00000033364	ProperStrand	47	1	-14.1783
chr7	26559612	26559628	protein_coding	Axl	exon	ENSMUSG00000002602	NonProperStrand	47	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-9.4174
chr5	30453240	30453267	protein_coding	Hadha	exon	ENSMUSG00000025745	ProperStrand	35	chr11	77995189	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	2	-11.6689
chr11	102014866	102015877	protein_coding	Tmem101	exon	ENSMUSG00000020921	ProperStrand	34	chr16	23111448	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.1231
chr3	88714113	88714266	protein_coding	Msto1	exon	ENSMUSG00000068922	ProperStrand	36	chr9	64143736	64143826	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	2	-13.9910
chrX	110199427	110199517	protein_coding	Chm	intron	ENSMUSG00000025531	ProperStrand	9	chr7	148634702	148634782	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-7.7646
chr1	172079415	172079495	protein_coding	Uap1	exon	ENSMUSG00000026670	ProperStrand	18	chr14	76247737	76247827	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-6.5333
chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	chr1	88252835	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-3.0042
chr2	71738059	71738099	protein_coding	Pdk1	exon	ENSMUSG00000006494	ProperStrand	37	chr7	30041736	30041773	protein_coding	Spint2	exon	ENSMUSG00000074227	ProperStrand	82	1	-13.6619
chr14	31984828	31984887	protein_coding	Nisch	exon	ENSMUSG00000021910	ProperStrand	125	chr19	8799831	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-3.5591
chr3	96528192	96528273	snoRNA	ENSMUSG00000065669_SNORA5	.	ENSMUSG00000065669	ProperStrand	180	chr19	8963027	8963117	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-0.7232
chr14	118925602	118927175	protein_coding	Abcc4	exon	ENSMUSG00000032849	ProperStrand	137	chr4	3762225	3762295	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	3	-17.4177
chr8	125305408	125305459	protein_coding	Acsf3	exon	ENSMUSG00000015016	ProperStrand	12	chr1	39605591	39605670	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-10.6135
chr7	15123517	15123535	protein_coding	Vmn1r90	intron	ENSMUSG00000041596	ProperStrand	3	chr9	120039533	120039587	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-9.5119
chr5	65726841	65726874	protein_coding	Rfc1	utr5	ENSMUSG00000029191	ProperStrand	53	chr1	59761677	59761714	snoRNA	ENSMUSG00000089093_Snord11	.	ENSMUSG00000089093	ProperStrand	193	1	-11.2198
chr7	126860387	126860454	protein_coding	Thumpd1	exon	ENSMUSG00000030942	NonProperStrand	2	chr8	74844875	74844975	protein_coding	Klf2	utr3	ENSMUSG00000055148	NonProperStrand	8	2	-inf
chr5	42136455	42136473	Low_complexity	GA-rich	Low_complexity	chr5GA-rich42136449	NonProperStrand	106	chr7	135842910	135845761	protein_coding	Mcmbp	exon	ENSMUSG00000048170	ProperStrand	87	1	-11.4229
chr1	91358413	91358430	protein_coding	Agap1	intron	ENSMUSG00000055013	ProperStrand	229	chr3	68889144	68889265	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-1.1092
chr13	36296517	36296599	protein_coding	Fars2	exon	ENSMUSG00000021420	ProperStrand	19	chr11	69481388	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.3947
chr12	25937101	25937191	LTR	MTEa	MaLR	chr12MTEa25937015	NonProperStrand	1	chr12	25937340	25937430	LTR	MTEa	MaLR	chr12MTEa25937225	NonProperStrand	1	1	-inf
chr8	109173075	109177469	protein_coding	Cdh1	exon	ENSMUSG00000000303	ProperStrand	283	chr15	82725596	82725636	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	3	-12.6736
chr18	35714256	35714292	lincRNA	Snhg4	intron	ENSMUSG00000090430	ProperStrand	270	chr16	32632762	32632808	protein_coding	Tfrc	utr3	ENSMUSG00000022797	ProperStrand	71	2	-15.7147
chr7	148634800	148634839	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	NonProperStrand	18	chr5	121655017	121655133	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	NonProperStrand	38	1	-16.6645
chr15	79079637	79079668	protein_coding	Pick1	utr3	ENSMUSG00000068206	ProperStrand	21	chr16	23111690	23111780	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-9.3638
chr11	87998206	88000565	protein_coding	Cuedc1	exon	ENSMUSG00000018378	NonProperStrand	20	chr4	131866642	131866672	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	1	-11.3299
chr18	34880002	34880019	protein_coding	Gfra3	utr5	ENSMUSG00000024366	ProperStrand	41	chr11	106362638	106362674	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-8.1664
chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	chr17	95160908	95218243	protein_coding	2610044O15Rik	exon	ENSMUSG00000066057	NonProperStrand	70	1	-9.4478
chr12	113028132	113028211	protein_coding	Klc1	intron	ENSMUSG00000021288	ProperStrand	35	chr7	88489787	88489805	protein_coding	Rps17	exon	ENSMUSG00000061787	ProperStrand	105	1	-13.2796
chr5	66651465	66651481	protein_coding	Nsun7	utr5	ENSMUSG00000029206	NonProperStrand	73	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	2	-14.2351
chr2	76471660	76471676	protein_coding	Prkra	exon	ENSMUSG00000002731	NonProperStrand	65	chr11	6428060	6428154	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.0482
chr5	118404001	118404101	protein_coding	Nos1	utr3	ENSMUSG00000029361	ProperStrand	11	chr15	79913287	79913346	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-6.9253
chr3	135370149	135370229	SINE	ID_B1	B4	chr3ID_B1135370032	ProperStrand	1	chr3	135370770	135370860	SINE	ID_B1	B4	chr3ID_B1135370721	ProperStrand	1	1	-inf
chr15	49103058	49103080	LTR	RLTR11A	ERVK	chr15RLTR11A49102653	NonProperStrand	2	chr7	29136560	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-inf
chr2	120300388	120300404	protein_coding	Capn3	intron	ENSMUSG00000079110	NonProperStrand	18	chr11	106362304	106362335	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-8.2541
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr10	23505780	23506653	protein_coding	Rps12	exon	ENSMUSG00000061983	ProperStrand	309	2	-6.4840
chr13	91481331	91481421	LTR	MTD-int	MaLR	chr13MTD-int91481116	ProperStrand	1	chr13	91481585	91481665	LTR	MTD-int	MaLR	chr13MTD-int91481577	ProperStrand	1	1	-inf
chr10	118320923	118320940	LINE	L2a	L2	chr10L2a118320826	NonProperStrand	1	chr1	63225253	63225300	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	1	-inf
chr15	10557219	10557263	protein_coding	Rai14	intron	ENSMUSG00000022246	ProperStrand	180	chr5	122113475	122113491	protein_coding	Brap	exon	ENSMUSG00000029458	NonProperStrand	1	1	-inf
chr5	27777809	27795954	protein_coding	Dpp6	exon	ENSMUSG00000061576	NonProperStrand	32	chr16	23110828	23110893	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.9664
chr10	48338780	48338797	LINE	Lx5	L1	chr10Lx548337987	ProperStrand	6	chr7	116664818	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-7.0474
chr6	92723209	92839985	protein_coding	Adamts9	utr3	ENSMUSG00000030022	ProperStrand	27	chr10	90581034	90581134	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	2	-10.3591
chr12	4107764	4107828	protein_coding	Dnajc27	utr3	ENSMUSG00000020657	ProperStrand	6	chr4	131908236	131908303	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-5.6461
chr10	80039602	80039653	protein_coding	Klf16	exon	ENSMUSG00000035397	ProperStrand	5	chr3	89050307	89050324	protein_coding	Krtcap2	exon	ENSMUSG00000042747	ProperStrand	17	1	-19.6626
chr11	53075205	53075246	protein_coding	Hspa4	exon	ENSMUSG00000020361	ProperStrand	69	chr7	52381719	52381736	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-7.2957
chr3	55987230	55987247	protein_coding	Nbea	utr5	ENSMUSG00000027799	NonProperStrand	115	chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	1	-6.8153
chr1	152287570	152289199	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	chr11	62416593	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-1.3188
chr2	27370718	27390755	protein_coding	Wdr5	utr5	ENSMUSG00000026917	ProperStrand	81	chr18	35716696	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-3.1256
chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	chr19	8800084	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-3.8963
chr2	31052658	31052748	protein_coding	Gpr107	intron	ENSMUSG00000000194	ProperStrand	99	chr1	89673606	89673686	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-2.3841
chr11	93770161	93775429	protein_coding	Mbtd1	exon	ENSMUSG00000059474	ProperStrand	36	chr16	23110886	23111001	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-4.1846
chr14	15572352	15572371	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr19	8963077	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	4	-4.0335
mmu-miR-6240	3	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr7	108971290	108971306	protein_coding	Inppl1	utr3	ENSMUSG00000032737	ProperStrand	272	1	-3.0442
chr11	120675324	120675820	protein_coding	Fasn	exon	ENSMUSG00000025153	ProperStrand	298	chr11	62418047	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-2.5740
chr1	145971868	145971889	LINE	L2	L2	chr1L2145971861	NonProperStrand	49	chrX	84483699	84483715	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-8.6550
chr8	60200180	60200197	LINE	L1M4	L1	chr8L1M460200074	ProperStrand	17	chr1	162965981	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-6.0488
chr7	19665424	19666280	protein_coding	Dmwd	exon	ENSMUSG00000030410	ProperStrand	41	chr9	15118262	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-7.0109
chr5	122830048	122831222	protein_coding	Gpn3	exon	ENSMUSG00000029464	ProperStrand	19	chr4	131865855	131865907	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-9.4466
chr10	75400054	75400154	protein_coding	Chchd10	exon	ENSMUSG00000049422	ProperStrand	140	chr16	23111453	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-1.4596
chr3	96654255	96654271	protein_coding	Pdzk1	exon	ENSMUSG00000038298	ProperStrand	101	chr11	77996576	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-5.0749
chr1	20552541	20552558	protein_coding	Pkhd1	exon	ENSMUSG00000043760	NonProperStrand	49	chr1	89673512	89673787	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	2	-6.1738
chr6	90418410	90418440	protein_coding	Klf15	intron	ENSMUSG00000030087	ProperStrand	9	chr19	8798507	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	3	-18.7639
chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-3.1794
chr1	181476981	181476997	protein_coding	Cnst	intron	ENSMUSG00000038949	ProperStrand	40	chrX	84483705	84483732	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-9.0633
chr11	87927466	87927556	protein_coding	Cuedc1	intron	ENSMUSG00000018378	NonProperStrand	20	chr7	54443564	54443654	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-11.9556
chr2	91436236	91436336	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	chr5	147646794	147646848	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	1	-2.4241
chr11	28286199	28286216	protein_coding	Ccdc85a	utr3	ENSMUSG00000032878	ProperStrand	2	chr15	79360674	79360715	protein_coding	Ddx17	exon	ENSMUSG00000055065	ProperStrand	140	1	-18.5749
chr7	116663669	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	chr7	51505506	51505591	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	18	-15.0590
chr17	26228769	26228859	protein_coding	Nme4	utr3	ENSMUSG00000024177	ProperStrand	9	chr11	68886928	68887008	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-7.9318
chr14	52912345	52912907	protein_coding	Tox4	exon	ENSMUSG00000016831	ProperStrand	16	chr17	24857750	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-7.9145
mmu-miR-1949	4	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr11	62416578	62416641	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-1.6850
chr1	4879588	4879643	protein_coding	Tcea1	exon	ENSMUSG00000033813	ProperStrand	24	chr8	73419687	73419777	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.8583
chr7	50708307	50709935	protein_coding	Etfb	exon	ENSMUSG00000004610	ProperStrand	5	chr19	8800355	8800446	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-13.9604
chr2	152271664	152271744	LTR	MLT1A1	MaLR	chr2MLT1A1152271518	NonProperStrand	1	chr3	107999833	107999923	protein_coding	Cyb561d1	utr3	ENSMUSG00000048796	NonProperStrand	2	1	-inf
chr5	97321386	97321466	LINE	Lx9	L1	chr5Lx997321310	NonProperStrand	1	chr5	97321561	97321651	LTR	RMER4B	ERVK	chr5RMER4B97321586	ProperStrand	1	1	-inf
chr5	111077928	111077946	protein_coding	Noc4l	exon	ENSMUSG00000033294	NonProperStrand	4	chr5	121655016	121655075	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-9.2889
chr11	102065773	102065874	protein_coding	Hdac5	exon	ENSMUSG00000008855	ProperStrand	45	chr6	71832550	71832581	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-6.1773
chr5	37186929	37187007	protein_coding	Mrfap1	utr3	ENSMUSG00000055302	ProperStrand	62	chr4	131908299	131908399	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.3718
chr7	134671420	134671520	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	chr17	35088957	35089002	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-1.1040
chr1	173177133	173177218	protein_coding	Ndufs2	exon	ENSMUSG00000013593	ProperStrand	32	chr16	23110829	23110919	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.9664
chr7	133637374	133637722	protein_coding	Atxn2l	exon	ENSMUSG00000032637	ProperStrand	219	chr9	15118543	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	1	-6.7637
chr3	146166340	146166359	protein_coding	Gng5	utr3	ENSMUSG00000068523	ProperStrand	13	chr5	130295415	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	2	-13.3443
chr10	82202939	82203017	protein_coding	Hcfc2	utr3	ENSMUSG00000020246	NonProperStrand	3	chr2	26494739	26494839	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	NonProperStrand	27	2	-23.7371
chr11	117700953	117700997	protein_coding	RP23-268N22.1	utr5	ENSMUSG00000093485	ProperStrand	3	chr7	52381719	52381784	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-13.9352
chr18	36957573	36957667	protein_coding	Zmat2	exon	ENSMUSG00000001383	ProperStrand	25	chr18	35100889	35100923	snoRNA	ENSMUSG00000089239_SNORD63	.	ENSMUSG00000089239	ProperStrand	18	1	-17.2952
chr5	31379788	31379845	protein_coding	Cad	exon	ENSMUSG00000013629	ProperStrand	260	chrX	35928319	35928336	protein_coding	Cul4b	intron	ENSMUSG00000031095	NonProperStrand	89	1	-9.5823
chr15	12764236	12764261	protein_coding	Drosha	exon	ENSMUSG00000022191	ProperStrand	163	chr1	82679326	82679342	protein_coding	Col4a3	exon	ENSMUSG00000079465	ProperStrand	99	1	-10.3019
chr12	60575476	60575494	LINE	L1_Mus4	L1	chr12L1_Mus460575423	ProperStrand	33	chr1	162965980	162965999	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-4.7374
chr3	136526736	136526753	protein_coding	Ppp3ca	intron	ENSMUSG00000028161	NonProperStrand	120	chr9	120038552	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.8669
chr2	165203163	165203180	protein_coding	Zfp334	utr3	ENSMUSG00000017667	NonProperStrand	33	chr5	108334195	108334254	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-5.9898
chr4	117317845	117317962	protein_coding	Eri3	intron	ENSMUSG00000033423	ProperStrand	246	chr2	26494777	26494840	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	4	-4.3386
chr5	115939523	115939572	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr1	162968213	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-1.7900
chr7	20282108	20282166	protein_coding	Apoe	exon	ENSMUSG00000002985	ProperStrand	231	chr8	97857433	97862549	protein_coding	AA960436	exon	ENSMUSG00000031792	ProperStrand	5	1	-15.7994
chr11	103241659	103248318	protein_coding	Plekhm1	exon	ENSMUSG00000034247	ProperStrand	23	chr7	117189965	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-5.1578
chr11	105444000	105444090	LINE	Lx4A	L1	chr11Lx4A105444008	ProperStrand	1	chr11	105443835	105443915	LTR	ORR1B1	MaLR	chr11ORR1B1105443796	NonProperStrand	1	1	-inf
chr13	46862888	46862969	snoRNA	ENSMUSG00000064558_SNORA55	.	ENSMUSG00000064558	ProperStrand	187	chr8	73419743	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-3.8778
chr12	111933374	111933436	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr1	173041632	173041649	tRNA	tRNA710-ValCAC	.	264497	ProperStrand	206	2	-9.4682
chr17	85170875	85171475	protein_coding	Lrpprc	exon	ENSMUSG00000024120	ProperStrand	98	chr9	120037899	120037936	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-3.7771
chr6	128324670	128324715	protein_coding	Foxm1	utr3	ENSMUSG00000001517	ProperStrand	31	chr5	130300460	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.6980
chr19	10682382	10682787	protein_coding	Ddb1	exon	ENSMUSG00000024740	ProperStrand	304	chr13	90238655	90238719	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	1	-5.4393
chr11	107408225	107408325	processed_transcript	A830035A12Rik	.	ENSMUSG00000059706	ProperStrand	3	chr2	166890502	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-13.9194
chr15	100448374	100448454	protein_coding	Dazap2	exon	ENSMUSG00000000346	ProperStrand	5	chr2	4709553	4717600	protein_coding	Bend7	exon	ENSMUSG00000048186	ProperStrand	15	1	-20.1544
chr11	48615329	48615813	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	chr14	55476645	55476661	protein_coding	Homez	exon	ENSMUSG00000057156	NonProperStrand	127	1	-8.2966
chr4	138916445	138916499	protein_coding	C230096C10Rik	exon	ENSMUSG00000078517	ProperStrand	69	chr3	68889026	68889188	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	9	-19.3368
chr7	56617506	56617523	protein_coding	Nav2	exon	ENSMUSG00000052512	NonProperStrand	11	chr16	23111448	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.1830
chr16	96377763	96377863	protein_coding	Wrb	utr3	ENSMUSG00000023147	ProperStrand	30	chr16	23111435	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	5	-11.3236
chr15	77356785	77356801	protein_coding	Apol7c	exon	ENSMUSG00000044309	ProperStrand	197	chr1	162965530	162965588	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-2.5207
chr12	75031895	75031960	lincRNA	Gm15283	intron	ENSMUSG00000087700	ProperStrand	30	chr2	73506226	73506247	protein_coding	Chn1	intron	ENSMUSG00000056486	ProperStrand	9	1	-18.9910
chr14	65370839	65376253	protein_coding	Kif13b	exon	ENSMUSG00000060012	ProperStrand	37	chr9	120038640	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.9292
chr12	77298587	77298667	LTR	RMER12	ERVK	chr12RMER1277298399	NonProperStrand	1	chr6	66750385	66750475	LTR	RMER12	ERVK	chr6RMER1266749998	NonProperStrand	1	1	-inf
chr2	91613185	91613203	protein_coding	Ambra1	exon	ENSMUSG00000040506	ProperStrand	65	chr16	23110457	23110557	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-4.1373
mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr9	123763783	123763799	protein_coding	Xcr1	utr3	ENSMUSG00000060509	NonProperStrand	40	1	-6.7062
chr5	74489202	74489255	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr10	43251225	43251242	protein_coding	1700021F05Rik	intron	ENSMUSG00000019797	NonProperStrand	4	1	-11.2543
chr12	70475689	70475705	protein_coding	Arf6	utr3	ENSMUSG00000044147	ProperStrand	32	chr18	35716684	35716761	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.2677
chr2	113204469	113204486	protein_coding	Fmn1	exon	ENSMUSG00000044042	ProperStrand	17	chr18	35102315	35102347	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-9.1305
chr11	70465530	70465633	protein_coding	Pfn1	utr3	ENSMUSG00000018293	ProperStrand	55	chr19	8799847	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-5.1155
chr5	136169635	136169673	protein_coding	Por	intron	ENSMUSG00000005514	ProperStrand	42	chr7	117189939	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-6.7291
chr18	36445886	36445944	protein_coding	Pura	intron	ENSMUSG00000043991	ProperStrand	20	chr9	120038610	120038674	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.1184
chr8	108368824	108368875	protein_coding	Cenpt	exon	ENSMUSG00000036672	ProperStrand	13	chr8	14759401	14759418	protein_coding	Dlgap2	intron	ENSMUSG00000047495	NonProperStrand	23	1	-18.0253
chr2	32818840	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	chr6	71832550	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	6	-1.7181
chr19	5801324	5801404	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr19	53715727	53715748	protein_coding	Smc3	exon	ENSMUSG00000024974	ProperStrand	61	2	-12.0366
chr9	88437418	88437435	LINE	L2a	L2	chr9L2a88437396	ProperStrand	10	chrX	70237450	70237471	miRNA	Mir2137	.	ENSMUSG00000089357	ProperStrand	50	1	-17.2928
chr11	97032856	97032956	protein_coding	Kpnb1	exon	ENSMUSG00000001440	ProperStrand	197	chr16	18240811	18240888	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	1	-6.7586
chr19	8948122	8948150	protein_coding	Ubxn1	exon	ENSMUSG00000071655	ProperStrand	68	chr10	39978363	39978485	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	3	-12.2248
chr1	72896200	72896269	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	chr11	62416579	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	4	-6.8319
chr8	72287172	72287188	protein_coding	Zfp866	utr3	ENSMUSG00000043090	NonProperStrand	134	chr11	69483136	69483228	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.2094
chr6	134668877	134668924	protein_coding	Dusp16	exon	ENSMUSG00000030203	ProperStrand	27	chr16	23111389	23111479	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-4.4613
chr2	29791176	29791201	protein_coding	Gle1	intron	ENSMUSG00000019715	ProperStrand	16	chrX	130496426	130496668	protein_coding	Sytl4	exon	ENSMUSG00000031255	ProperStrand	169	1	-13.9263
chr2	38860341	38860646	protein_coding	Rpl35	exon	ENSMUSG00000062997	ProperStrand	68	chr11	62418038	62418080	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-5.3129
chr6	125440018	125440093	protein_coding	Cd9	intron	ENSMUSG00000030342	ProperStrand	81	chr11	68887040	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-3.5831
chr3	27140540	27140564	protein_coding	Nceh1	exon	ENSMUSG00000027698	ProperStrand	13	chr1	164628147	164628247	protein_coding	Prrc2c	exon	ENSMUSG00000040225	ProperStrand	413	1	-12.5655
chr7	20282277	20282304	protein_coding	Apoe	exon	ENSMUSG00000002985	ProperStrand	231	chr7	152118581	152118597	protein_coding	Ccnd1	exon	ENSMUSG00000070348	ProperStrand	93	1	-9.7303
chr11	62416602	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	chr7	67123706	67123728	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	1	-1.7837
chr7	4470052	4471083	protein_coding	Tnni3	exon	ENSMUSG00000035458	ProperStrand	5	chr16	23110970	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-7.3377
chr19	29678580	29678596	protein_coding	C030046E11Rik	exon	ENSMUSG00000038658	ProperStrand	104	chr8	73419717	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.1792
chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	chr5	142459852	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	1	-7.5921
chr17	35386531	35386570	protein_coding-noncoding	Ddx39b	utr5	ENSMUSG00000019432	ProperStrand	7	chr4	132617330	132617350	protein_coding	Ahdc1	utr5	ENSMUSG00000037692	ProperStrand	100	1	-16.7406
chr17	66203501	66203520	protein_coding	Ralbp1	exon	ENSMUSG00000024096	ProperStrand	39	chr9	15119327	15119427	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-5.9528
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr16	42282955	42282971	protein_coding	Gap43	intron	ENSMUSG00000047261	NonProperStrand	25	1	-10.3603
chr19	10269449	10271331	protein_coding	Fads1	utr3	ENSMUSG00000010663	ProperStrand	21	chr18	35714145	35714290	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	3	-12.8542
chr12	103640099	103640140	protein_coding	Lgmn	exon	ENSMUSG00000021190	ProperStrand	18	chr4	131908690	131908739	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.1942
chr17	46814084	46814100	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr16	32683330	32683405	protein_coding	Tnk2	utr3	ENSMUSG00000022791	ProperStrand	86	1	-8.5096
chrX	72214248	72214264	protein_coding-noncoding	Gab3	utr3	ENSMUSG00000032750	ProperStrand	420	chr17	35089180	35089234	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	2	-3.5184
chr16	45627798	45627817	protein_coding	BC016579	utr3	ENSMUSG00000033187	ProperStrand	13	chr19	8963084	8963174	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-8.5277
chr2	90235318	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	28982469	28982486	protein_coding	Ntm	intron	ENSMUSG00000059974	ProperStrand	49	1	-4.8520
chr19	41158795	41160715	protein_coding	Tll2	exon	ENSMUSG00000025013	ProperStrand	8	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.4974
chr2	130442086	130442166	protein_coding	Fastkd5	exon	ENSMUSG00000079043	ProperStrand	9	chr11	69481381	69481471	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-6.9176
chr1	55210018	55210036	protein_coding	Mob4	utr3	ENSMUSG00000025979	NonProperStrand	1	chr2	130109497	130109513	protein_coding	Idh3b	exon	ENSMUSG00000027406	ProperStrand	146	1	-inf
chr12	60301889	60301906	protein_coding	Fbxo33	utr3	ENSMUSG00000035329	NonProperStrand	2	chr2	144087332	144087451	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-13.9887
chr9	105546700	105546717	protein_coding	Pik3r4	exon	ENSMUSG00000032571	ProperStrand	49	chr5	122691619	122691635	protein_coding	Tctn1	utr3	ENSMUSG00000038593	ProperStrand	34	1	-14.8775
chr11	120440163	120440187	protein_coding	Arhgdia	utr3	ENSMUSG00000025132	ProperStrand	39	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-8.5911
chr8	72552550	72552640	protein_coding	Mau2	exon	ENSMUSG00000031858	ProperStrand	17	chr3	88497852	88497932	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-10.0095
chr7	13510911	13511115	protein_coding	Rps5	exon	ENSMUSG00000012848	ProperStrand	108	chr5	130300472	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.5648
chr15	83208030	83208129	protein_coding	Pacsin2	utr3	ENSMUSG00000016664	ProperStrand	30	chr11	68876540	68876571	tRNA	tRNA1821-SerGCT	.	342646	ProperStrand	39	2	-19.5804
chr2	29926931	29927038	protein_coding	Set	utr3	ENSMUSG00000054766	ProperStrand	167	chr2	63936036	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-5.8363
chr5	118452146	118458083	protein_coding	Fbxo21	exon	ENSMUSG00000032898	ProperStrand	34	chr18	35716809	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.1571
chr17	10399821	10399911	protein_coding	Qk	utr3	ENSMUSG00000062078	ProperStrand	63	chr11	69483199	69483279	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.3670
chr7	140336686	140336776	LINE	L1MA7	L1	chr7L1MA7140336536	NonProperStrand	1	chr7	140337049	140337129	Low_complexity	GA-rich	Low_complexity	chr7GA-rich140337035	NonProperStrand	1	1	-inf
chr3	8666738	8666756	protein_coding	Hey1	intron	ENSMUSG00000040289	ProperStrand	26	chr18	35714143	35714256	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-5.0340
chr17	45706326	45706508	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr18	75160712	75160777	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	1	-2.8186
chr11	23156455	23156546	protein_coding	Xpo1	utr5	ENSMUSG00000020290	ProperStrand	123	chr11	106362303	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-4.4527
chr15	85863132	85863190	protein_coding	Celsr1	exon	ENSMUSG00000016028	ProperStrand	56	chr14	60292696	60292713	protein_coding	Atp8a2	intron	ENSMUSG00000021983	NonProperStrand	23	1	-15.3668
chr6	70794801	70794819	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chr4	131865930	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.2081
chr12	34735983	34736000	protein_coding	Hdac9	utr3	ENSMUSG00000004698	ProperStrand	41	chr3	88497852	88497928	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	2	-13.1183
chr11	62416574	62416607	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr5	140857296	140857313	protein_coding	Snx8	intron	ENSMUSG00000029560	ProperStrand	106	1	-7.8343
chr8	109583185	109583275	protein_coding	Nip7	utr3	ENSMUSG00000031917	ProperStrand	18	chr2	130101972	130102052	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-7.7579
chr2	143780927	143782505	protein_coding	Rrbp1	exon	ENSMUSG00000027422	ProperStrand	76	chr1	129798197	129800250	protein_coding	Rab3gap1	exon	ENSMUSG00000036104	ProperStrand	19	5	-20.0928
chr4	126709724	126709785	protein_coding	Sfpq	intron	ENSMUSG00000028820	ProperStrand	340	chr15	34370618	34370675	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	4	-4.0252
chr16	75761550	75765200	protein_coding	Hspa13	exon	ENSMUSG00000032932	NonProperStrand	57	chr7	29136602	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-6.5118
chr7	52573639	52573729	protein_coding	Trpm4	intron	ENSMUSG00000038260	ProperStrand	161	chr3	123210904	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-0.7065
chr1	164645592	164645770	protein_coding	Prrc2c	exon	ENSMUSG00000040225	ProperStrand	413	chr1	192887272	192887294	protein_coding	Nsl1	intron	ENSMUSG00000062510	NonProperStrand	2	1	-17.0392
chr2	158182202	158182278	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	chr8	113362435	113362475	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	1	-1.4522
chr4	118740460	118740594	lincRNA	Gm12866	intron	ENSMUSG00000066060	ProperStrand	2	chr8	98269958	98269977	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-12.9619
chr1	58251605	58251621	protein_coding	Aox3	exon	ENSMUSG00000064294	ProperStrand	39	chr19	8798484	8798517	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-6.0570
chr5	135520383	135520403	protein_coding	Stx1a	intron	ENSMUSG00000007207	ProperStrand	4	chr1	194423806	194423823	protein_coding	Hhat	intron	ENSMUSG00000037375	ProperStrand	12	1	-21.0614
chr11	75305594	75305650	protein_coding	Prpf8	exon	ENSMUSG00000020850	ProperStrand	255	chr5	136625758	136625796	protein_coding	Orai2	utr3	ENSMUSG00000039747	ProperStrand	2	1	-18.0844
chr5	109124122	109132306	protein_coding	Fgfrl1	exon	ENSMUSG00000008090	ProperStrand	111	chr11	62416599	62416657	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-3.9907
chr11	48614367	48614434	snoRNA	ENSMUSG00000064500_SNORD95	.	ENSMUSG00000064500	ProperStrand	100	chr7	29136622	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-2.8959
chr2	157119950	157120991	protein_coding	Rpn2	exon	ENSMUSG00000027642	ProperStrand	363	chr8	74844975	74844994	protein_coding	Klf2	utr3	ENSMUSG00000055148	ProperStrand	82	1	-9.0807
chr11	48616641	48616669	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	chr15	5068446	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-2.3759
chr3	88952697	88952713	protein_coding	Hcn3	exon	ENSMUSG00000028051	ProperStrand	40	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.9420
chr11	60535267	60535315	protein_coding	Flii	exon	ENSMUSG00000002812	ProperStrand	42	chr2	4829164	4829180	protein_coding	Sephs1	utr3	ENSMUSG00000026662	NonProperStrand	271	1	-11.0098
chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	chr14	76247754	76247822	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-1.7696
chr12	86353993	86409384	protein_coding	Ylpm1	intron	ENSMUSG00000021244	ProperStrand	100	chr2	26494708	26494840	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	4	-8.2346
chr11	119796295	119796312	LINE	L1M3	L1	chr11L1M3119796212	ProperStrand	14	chr15	99433436	99433452	protein_coding	Aqp6	exon	ENSMUSG00000043144	NonProperStrand	45	1	-16.9247
chr9	21809188	21811029	protein_coding	Prkcsh	exon	ENSMUSG00000003402	ProperStrand	58	chr17	35088956	35089006	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	4	-17.8966
chr6	124761362	124761536	protein_coding	Tpi1	exon	ENSMUSG00000023456	ProperStrand	94	chr7	116664821	116664911	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-3.3135
chr2	174263698	174263764	protein_coding	Ctsz	exon	ENSMUSG00000016256	ProperStrand	13	chr7	116664794	116664884	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-5.4346
chr6	113546933	113546950	protein_coding	4931417G12Rik	utr3	ENSMUSG00000033963	ProperStrand	16	chr7	16524111	16524138	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	1	-12.4041
chr6	28833287	28833315	protein_coding	Snd1	exon	ENSMUSG00000001424	ProperStrand	210	chr6	56828314	56828392	protein_coding	Fkbp9	utr3	ENSMUSG00000029781	ProperStrand	39	1	-11.6698
chr8	63511727	63511854	protein_coding	Nek1	intron	ENSMUSG00000031644	ProperStrand	23	chr19	8800451	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-5.3675
chr16	11144154	11144254	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr5	117788310	117788326	protein_coding	Vsig10	exon	ENSMUSG00000066894	NonProperStrand	9	1	-14.3424
chr2	32818908	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	chr17	71990923	71991000	snoRNA	ENSMUSG00000092713_CT010429.1	.	ENSMUSG00000092713	ProperStrand	182	4	-11.2792
chr15	76133127	76133144	protein_coding	Oplah	exon	ENSMUSG00000022562	ProperStrand	20	chr16	23110829	23110895	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-3.0614
chr13	24527019	24527035	protein_coding	Cmah	exon	ENSMUSG00000016756	ProperStrand	5	chr6	38512412	38512483	protein_coding	Luc7l2	intron	ENSMUSG00000029823	ProperStrand	85	1	-17.5699
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr7	53653469	53653487	protein_coding	Kcnc1	exon	ENSMUSG00000058975	ProperStrand	21	1	-11.0509
chr10	79138266	79138282	protein_coding	Gm16517	exon	ENSMUSG00000020308	ProperStrand	43	chr8	74985101	74985119	protein_coding	Cherp	utr3	ENSMUSG00000052488	ProperStrand	43	1	-14.6677
chr3	135074148	135074164	protein_coding	Cisd2	exon	ENSMUSG00000028165	NonProperStrand	4	chr18	35716810	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-7.5042
chr1	16760384	16760474	LINE	L1_Mus1	L1	chr1L1_Mus116760235	ProperStrand	1	chr1	16760126	16760216	pseudogene	Gm5828	.	ENSMUSG00000091020	NonProperStrand	2	1	-inf
chr17	33088738	33088755	pseudogene	Cyp4f41-ps	.	ENSMUSG00000024295	NonProperStrand	9	chr18	33954900	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	3	-16.7072
chr11	93814176	93816859	protein_coding	Gm20390	exon	ENSMUSG00000091228	ProperStrand	33	chr11	69481341	69481421	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-4.3164
chr10	127565194	127565274	protein_coding	Baz2a	utr3	ENSMUSG00000040054	ProperStrand	274	chr15	82956924	82956940	protein_coding	Poldip3	utr3	ENSMUSG00000041815	ProperStrand	57	1	-10.3720
chr2	61601955	61602976	protein_coding	Psmd14	exon	ENSMUSG00000026914	ProperStrand	16	chr7	134923950	134924042	protein_coding	Setd1a	exon	ENSMUSG00000042308	ProperStrand	58	9	-20.4355
chr14	67690928	67690951	protein_coding	Ppp2r2a	utr5	ENSMUSG00000022052	NonProperStrand	5	chr11	69481374	69481474	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	NonProperStrand	24	2	-19.1878
chr11	23794837	23794854	antisense	Gm12061	.	ENSMUSG00000084769	ProperStrand	18	chr16	23111389	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-5.6208
chr2	49134501	49134518	protein_coding	Mbd5	exon	ENSMUSG00000036792	ProperStrand	15	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-11.7436
chr2	91521329	91521414	protein_coding	Atg13	intron	ENSMUSG00000027244	ProperStrand	22	chr8	93837436	93837500	protein_coding	Fto	utr5	ENSMUSG00000055932	ProperStrand	34	1	-16.4669
chr7	123876179	123876209	LINE	L2a	L2	chr7L2a123876154	NonProperStrand	1	chr7	123876569	123876605	LTR	BGLII	ERVK	chr7BGLII123876362	ProperStrand	1	1	-inf
chr11	86520346	86520638	protein_coding	Cltc	exon	ENSMUSG00000047126	ProperStrand	319	chr5	130300525	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	8	-6.8066
chr9	88416890	88416922	lincRNA	Snhg5	intron	ENSMUSG00000032424	ProperStrand	13	chr17	29763847	29763947	protein_coding	Rnf8	exon	ENSMUSG00000090083	ProperStrand	1	1	-inf
chr9	35023918	35024008	protein_coding	Srpr	utr3	ENSMUSG00000032042	ProperStrand	54	chr16	23110527	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.6430
chr1	108068495	108068514	protein_coding	Phlpp1	utr5	ENSMUSG00000044340	ProperStrand	67	chr8	98269959	98270030	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	2	-8.7387
chr13	9833553	9833619	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr8	13876096	13876175	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	4	-1.9455
chr6	51412916	51412970	protein_coding	Hnrnpa2b1	utr3	ENSMUSG00000004980	ProperStrand	166	chr17	35089181	35089238	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	2	-6.0207
chr11	98855113	98855159	protein_coding	Top2a	utr3	ENSMUSG00000020914	ProperStrand	324	chr4	131865378	131865474	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	10	-17.6377
chr8	123607634	123607652	protein_coding	Gm20388	intron	ENSMUSG00000092329	ProperStrand	295	chr11	77996571	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-3.0713
chr9	103228619	103228709	protein_coding	Topbp1	intron	ENSMUSG00000032555	ProperStrand	81	chr14	33005156	33005236	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-3.4363
chr6	13827941	13827990	lincRNA	1110019D14Rik	intron	ENSMUSG00000084931	ProperStrand	3	chr11	97642981	97643071	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-8.5513
chr1	138068844	138069380	protein_coding	Kif21b	exon	ENSMUSG00000041642	ProperStrand	77	chr4	53873599	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	2	-13.5864
chr13	63391641	63391723	protein_coding	2010111I01Rik	intron	ENSMUSG00000021458	ProperStrand	32	chr18	35714193	35714283	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.6297
chr8	108233712	108233730	protein_coding	4933405L10Rik	exon	ENSMUSG00000013158	ProperStrand	94	chr3	123210849	123210932	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	5	-7.7241
chr4	21797544	21798592	protein_coding	Sfrs18	exon	ENSMUSG00000028248	NonProperStrand	26	chr11	97642952	97643093	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.9888
chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr11	97642948	97643079	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	8	-1.1318
chr8	41570003	41570019	protein_coding	Zdhhc2	utr3	ENSMUSG00000039470	NonProperStrand	85	chr17	13184998	13185015	protein_coding	Wtap	utr5	ENSMUSG00000060475	ProperStrand	119	1	-11.2377
chr14	71004379	71004459	protein_coding	Epb4.9	utr3	ENSMUSG00000022099	ProperStrand	48	chr8	74146695	74147044	protein_coding	Glt25d1	exon	ENSMUSG00000034807	ProperStrand	36	1	-14.7848
chr9	30296277	30296367	DNA	Charlie12	MER1_type	chr9Charlie1230295600	NonProperStrand	1	chr6	99692058	99692138	LTR	MTD	MaLR	chr6MTD99692001	ProperStrand	1	1	-inf
chr13	9833562	9833661	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr17	30765872	30765906	protein_coding	Dnahc8	intron	ENSMUSG00000033826	ProperStrand	246	1	-2.3705
chr7	148341440	148341540	protein_coding	Ptdss2	utr3	ENSMUSG00000025495	ProperStrand	29	chr2	158185530	158185568	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-7.9389
chr2	158182155	158182298	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	chr19	8963025	8963183	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	60	-9.6078
chr10	23505149	23505283	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	chr15	79908928	79909019	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	63	-2.0005
chr14	47941569	47941586	protein_coding	Mapk1ip1l	utr3	ENSMUSG00000021840	NonProperStrand	16	chr4	44045576	44045596	protein_coding	Clta	utr3	ENSMUSG00000028478	ProperStrand	59	1	-16.0171
chr15	81110991	81111009	SINE	ID4	ID	chr15ID481110956	ProperStrand	272	chr9	120039533	120039574	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-0.9361
chr1	136516270	136517450	protein_coding	Kdm5b	utr5	ENSMUSG00000042207	ProperStrand	223	chr5	74489640	74489679	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-1.5416
chr2	90235322	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	72136337	72136353	protein_coding	B230120H23Rik	exon	ENSMUSG00000004085	ProperStrand	34	1	-5.5655
chr8	59963935	59964394	protein_coding	Sap30	exon	ENSMUSG00000031609	ProperStrand	16	chr5	130300457	130300537	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.9748
chr5	74489203	74489283	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr12	92811912	92812002	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	1	-1.4115
chr12	29316593	29318666	protein_coding	Rps7	exon	ENSMUSG00000061477	ProperStrand	129	chr4	122970435	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-5.9018
chr4	96412508	96412526	protein_coding	Gm12695	intron	ENSMUSG00000078639	ProperStrand	110	chr4	131865855	131865977	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-3.0230
chr9	70409635	70422376	protein_coding	Sltm	exon	ENSMUSG00000032212	ProperStrand	13	chr11	97642952	97643090	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-12.7755
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr5	67787310	67787355	protein_coding	Bend4	utr3	ENSMUSG00000092060	ProperStrand	56	1	-8.1124
chr3	101380883	101398139	protein_coding	Atp1a1	exon	ENSMUSG00000033161	ProperStrand	316	chr16	23110902	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	13	-0.8573
chrX	12858918	12868793	protein_coding	Ddx3x	intron	ENSMUSG00000000787	ProperStrand	67	chr7	117166782	117166858	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	2	-7.6434
chr13	113284903	113284953	protein_coding	Il6st	exon	ENSMUSG00000021756	ProperStrand	34	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-11.5747
chr14	56250328	56250351	protein_coding	Ipo4	exon	ENSMUSG00000002319	ProperStrand	62	chr2	29014439	29014455	protein_coding	Setx	exon	ENSMUSG00000043535	ProperStrand	187	1	-10.9672
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	133801499	133801515	lincRNA	E130218I03Rik	exon	ENSMUSG00000086322	ProperStrand	1	1	-inf
chr11	115705851	115706176	protein_coding	Llgl2	exon	ENSMUSG00000020782	ProperStrand	62	chr2	26494708	26494740	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	3	-7.7711
chr10	79755601	79756432	protein_coding	Rps15	exon	ENSMUSG00000063457	ProperStrand	119	chr16	23111772	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-1.8675
chr9	35020404	35020442	protein_coding	Srpr	exon	ENSMUSG00000032042	ProperStrand	54	chr2	158182180	158182277	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-5.2071
chr15	80045139	80045213	protein_coding	Mgat3	utr3	ENSMUSG00000042428	ProperStrand	14	chr4	131865381	131865457	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-6.8658
chr16	17485894	17485911	protein_coding	Crkl	utr3	ENSMUSG00000006134	ProperStrand	43	chr18	35716763	35716883	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.7374
chr1	162965918	162965977	non_coding	Gas5	.	ENSMUSG00000053332	ProperStrand	144	chr10	90432673	90432690	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	1	-8.8646
chr16	91270621	91270640	protein_coding	Olig1	exon	ENSMUSG00000046160	NonProperStrand	32	chr12	16946808	16946921	snoRNA	ENSMUSG00000064620_SNORA32	.	ENSMUSG00000064620	ProperStrand	165	2	-19.0716
chr5	74489219	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr10	85504850	85504899	protein_coding	Fbxo7	intron	ENSMUSG00000001786	ProperStrand	13	1	-8.6980
chr17	31523814	31523893	protein_coding	Pde9a	intron	ENSMUSG00000041119	NonProperStrand	2	chr2	26768384	26768433	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	NonProperStrand	6	1	-inf
chr10	126532147	126532163	protein_coding	Os9	utr3	ENSMUSG00000040462	NonProperStrand	28	chr4	22415358	22415374	protein_coding	Pou3f2	utr5	ENSMUSG00000052621	ProperStrand	13	1	-17.7254
chr12	104330679	104330695	protein_coding	Unc79	intron	ENSMUSG00000021198	NonProperStrand	25	chr10	90432660	90432679	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	1	-12.3898
chr7	134275648	134275738	SINE	B2_Mm2	B2	chr7B2_Mm2134275525	ProperStrand	1	chr7	134275819	134275909	protein_coding-noncoding	Spn	utr3	ENSMUSG00000051457	ProperStrand	1	1	-inf
chr11	117900043	117900125	protein_coding	Dnahc17	intron	ENSMUSG00000033987	NonProperStrand	20	chr7	118219574	118219599	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-6.3193
chr10	6063958	6063978	protein_coding	Akap12	intron	ENSMUSG00000038587	ProperStrand	1008	chr5	108336374	108336469	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	4	-2.6639
chr11	69483136	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	chr1	145626058	145626193	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	6	-1.7093
chr5	8397751	8397841	protein_coding	Dbf4	exon	ENSMUSG00000002297	ProperStrand	38	chr16	23111689	23111754	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.6668
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr19	8963058	8963170	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-2.8774
chr8	93649800	93649959	protein_coding	Aktip	exon	ENSMUSG00000031667	ProperStrand	13	chr17	24665449	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	3	-18.1339
chr6	95079427	95079443	protein_coding	Kbtbd8	utr3	ENSMUSG00000030031	ProperStrand	26	chr7	30074412	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-12.1205
chr17	56758812	56759473	protein_coding	Lonp1	exon	ENSMUSG00000041168	ProperStrand	83	chr17	35299547	35299637	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-4.1581
chr15	88518737	88518799	protein_coding	Brd1	exon	ENSMUSG00000022387	ProperStrand	70	chr11	68886963	68887037	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	4	-12.6159
chr3	138190349	138190365	protein_coding	Eif4e	intron	ENSMUSG00000028156	ProperStrand	25	chr4	118951571	118951624	protein_coding	Ybx1	exon	ENSMUSG00000028639	ProperStrand	171	1	-12.9823
chr5	137963955	137963997	protein_coding	Gigyf1	exon	ENSMUSG00000029714	ProperStrand	49	chr13	23831135	23831186	protein_coding	Hist1h1c	exon	ENSMUSG00000036181	ProperStrand	99	1	-12.7181
chr9	27902581	27902599	protein_coding	Opcml	intron	ENSMUSG00000062257	NonProperStrand	14	chr16	23111758	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.5328
chr5	4878250	4878266	protein_coding	Cdk14	intron	ENSMUSG00000028926	ProperStrand	20	chr3	129331325	129331344	protein_coding	Elovl6	exon	ENSMUSG00000041220	ProperStrand	59	1	-15.5508
chr16	22256762	22256832	protein_coding	Tra2b	intron	ENSMUSG00000022858	ProperStrand	32	chr16	23110456	23110522	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.5869
chr16	57391627	57391723	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr14	14704552	14704570	protein_coding	Gm281	intron	ENSMUSG00000084902	ProperStrand	23	1	-12.2472
chr5	138740068	138740115	protein_coding	Stag3	exon	ENSMUSG00000036928	ProperStrand	53	chr5	108334217	108336485	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	7	-19.4081
chr14	108986504	108986521	LTR	MTE-int	MaLR	chr14MTE-int108986408	ProperStrand	32	chr3	90052981	90053008	protein_coding	Slc39a1	exon	ENSMUSG00000052310	ProperStrand	6	1	-18.5075
chr8	85388124	85388140	protein_coding	Rnf150	exon	ENSMUSG00000047747	ProperStrand	8	chr11	62416598	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-9.2486
chr10	107769746	107769763	protein_coding	Pawr	utr5	ENSMUSG00000035873	ProperStrand	39	chr2	32079062	32079511	protein_coding	Prrc2b	exon	ENSMUSG00000039262	ProperStrand	344	2	-16.6730
chr16	13715678	13725271	protein_coding	Pla2g10	exon	ENSMUSG00000022683	ProperStrand	6	chr19	8963081	8963171	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-6.7266
chr2	164257636	164257652	protein_coding	Sdc4	intron	ENSMUSG00000017009	ProperStrand	177	chr9	82723543	82723559	protein_coding	Irak1bp1	utr5	ENSMUSG00000032251	NonProperStrand	16	1	-13.8287
chr1	15630548	15630564	protein_coding	Kcnb2	intron	ENSMUSG00000092083	NonProperStrand	10	chr9	120037956	120038054	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-8.2995
chr2	173468338	173468366	pseudogene	Ppp4r1l-ps	.	ENSMUSG00000055897	ProperStrand	9	chr17	24857794	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	3	-14.0664
chr10	62342641	62342741	protein_coding	Tet1	exon	ENSMUSG00000047146	ProperStrand	286	chr1	162965556	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-0.8489
chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	chr1	162966189	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-3.6631
chr4	42997491	42997531	protein_coding	Vcp	exon	ENSMUSG00000028452	ProperStrand	108	chr2	37255577	37255642	snoRNA	ENSMUSG00000077756_Snord90	.	ENSMUSG00000077756	ProperStrand	167	2	-15.8641
chr2	28357617	28357719	protein_coding	Gbgt1	exon	ENSMUSG00000026829	ProperStrand	3	chr1	88247755	88247876	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	3	-inf
chr17	88374572	88374634	protein_coding	Msh6	exon	ENSMUSG00000005370	ProperStrand	150	chr9	15119298	15119388	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	3	-8.4270
chr7	50729125	50729210	protein_coding	Iglon5	utr3	ENSMUSG00000013367	ProperStrand	1	chr8	125418803	125418819	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	1	-inf
chr6	125079856	125079934	protein_coding	Chd4	exon	ENSMUSG00000063870	ProperStrand	303	chr11	51551280	51551308	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	1	-4.5291
chr18	6237267	6237284	protein_coding	Kif5b	intron	ENSMUSG00000006740	NonProperStrand	4	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.0048
chr15	30628654	30628670	protein_coding	Ctnnd2	intron	ENSMUSG00000022240	ProperStrand	24	chr5	130300419	130300464	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.1835
chr7	28262046	28262095	protein_coding	Sertad3	utr3	ENSMUSG00000055200	ProperStrand	2	chr16	23110980	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr16	11867402	11867422	protein_coding	Cpped1	intron	ENSMUSG00000065979	ProperStrand	13	chr7	29136544	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	4	-16.6453
chr8	79656227	79656248	protein_coding	Nr3c2	intron	ENSMUSG00000031618	ProperStrand	23	chr16	23111772	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.5778
chr13	46784576	46788886	protein_coding	Nup153	exon	ENSMUSG00000021374	ProperStrand	69	chr1	162967490	162967566	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	6	-17.1316
chr15	88693303	88693367	protein_coding	Pim3	exon	ENSMUSG00000035828	ProperStrand	66	chr13	21998978	21999062	tRNA	tRNA82-MetCAT	.	887113	ProperStrand	44	1	-13.7467
chr18	61746997	61747061	protein_coding	Csnk1a1	intron	ENSMUSG00000024576	ProperStrand	64	chr5	96563068	96563104	protein_coding	Cnot6l	exon	ENSMUSG00000034724	ProperStrand	3	2	-inf
chr5	5351802	5351819	protein_coding	Cdk14	intron	ENSMUSG00000028926	NonProperStrand	23	chr19	8963027	8963082	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.0031
chr8	125430016	125430037	protein_coding-noncoding	Ankrd11	utr3	ENSMUSG00000035569	ProperStrand	5	chr5	108334195	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	3	-19.5617
chr2	35949553	35949572	protein_coding	Lhx6	intron	ENSMUSG00000026890	NonProperStrand	17	chr5	115939535	115939612	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-10.4179
chr11	102468344	102468362	protein_coding	Fzd2	utr3	ENSMUSG00000050288	ProperStrand	15	chr1	59749360	59749423	snoRNA	ENSMUSG00000077358_SNORD70	.	ENSMUSG00000077358	ProperStrand	63	1	-16.0500
chr2	154713521	154714043	protein_coding	Eif2s2	exon	ENSMUSG00000074656	ProperStrand	96	chr18	35716754	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-2.7141
chr15	12763919	12763964	protein_coding	Drosha	exon	ENSMUSG00000022191	ProperStrand	163	chr18	35716860	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-0.7618
chr17	87835161	87835199	protein_coding	Calm2	exon	ENSMUSG00000036438	ProperStrand	59	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-3.6233
chr11	120685348	120685403	protein_coding	Fasn	utr5	ENSMUSG00000025153	ProperStrand	298	chr5	5322630	5322646	protein_coding	Cdk14	intron	ENSMUSG00000028926	ProperStrand	20	1	-12.3280
chr6	128316039	128316079	protein_coding	Foxm1	exon	ENSMUSG00000001517	ProperStrand	31	chr19	8800419	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-4.7823
chr1	187177903	187180370	protein_coding	Bpnt1	exon	ENSMUSG00000026617	ProperStrand	15	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-11.7954
chr13	62944660	62944677	protein_coding	Fbp2	intron	ENSMUSG00000021456	ProperStrand	100	chr17	24857795	24857851	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.4927
chr1	6363974	6364064	lincRNA	Fam150a	intron	ENSMUSG00000087247	ProperStrand	4	chr5	108336937	108337017	protein_coding	Rpl5	utr3	ENSMUSG00000058558	ProperStrand	235	1	-16.2378
chr10	95011768	95011868	protein_coding	Nudt4	utr3	ENSMUSG00000020029	ProperStrand	32	chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-7.0902
chr4	21803524	21803542	protein_coding	Sfrs18	utr3	ENSMUSG00000028248	NonProperStrand	26	chr10	90581105	90581195	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-6.4516
chr8	74485665	74490978	protein_coding	Zfp961	intron	ENSMUSG00000052446	ProperStrand	35	chr10	110918600	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	4	-14.3042
chr6	141607833	141607850	protein_coding	Slco1b2	intron	ENSMUSG00000030236	NonProperStrand	14	chr2	30301990	30302045	protein_coding	Ppp2r4	utr3	ENSMUSG00000039515	ProperStrand	76	1	-15.8167
chr17	24856706	24856779	antisense	Snhg9	.	ENSMUSG00000090101	ProperStrand	218	chr11	69481335	69481391	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-1.1327
chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	chr1	3661500	3661517	protein_coding	Xkr4	utr5	ENSMUSG00000051951	ProperStrand	59	1	-11.7192
chr5	74489216	74489332	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	3	-4.7527
chr2	155826847	155826863	protein_coding	6430550D23Rik	utr3	ENSMUSG00000074646	ProperStrand	2	chr18	35716762	35716832	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	NonProperStrand	45	1	-19.7664
chr17	5297549	5297639	protein_coding	Arid1b	intron	ENSMUSG00000069729	ProperStrand	28	chr17	24856655	24856735	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-7.9503
chr4	56808449	56809400	protein_coding	Ikbkap	exon	ENSMUSG00000028431	ProperStrand	44	chr10	23505152	23505202	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.6830
chr14	117969537	117969554	protein_coding	Gpc6	intron	ENSMUSG00000058571	NonProperStrand	31	chr11	55296277	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-7.4954
chr7	53753589	53753610	protein_coding	Sergef	intron	ENSMUSG00000030839	NonProperStrand	7	chr16	23110829	23110873	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.4785
chr14	103690276	103690293	protein_coding	Mycbp2	exon	ENSMUSG00000033004	NonProperStrand	19	chr10	127562116	127562179	protein_coding	Baz2a	exon	ENSMUSG00000040054	ProperStrand	274	1	-12.6025
chr7	148255536	148255611	protein_coding	B4galnt4	intron	ENSMUSG00000055629	ProperStrand	11	chr4	131908315	131908415	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.3989
chr5	35860196	35860281	protein_coding	Cpz	exon	ENSMUSG00000036596	ProperStrand	5	chr4	131908350	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-15.0190
chr18	80403700	80403717	protein_coding	Txnl4a	utr5	ENSMUSG00000057130	ProperStrand	44	chr7	117190013	117190062	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.9072
chr5	121655644	121655782	protein_coding	Rpl6	exon	ENSMUSG00000029614	ProperStrand	332	chr7	52382755	52382831	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-3.4641
chr9	108275938	108276018	protein_coding	Usp4	exon	ENSMUSG00000032612	ProperStrand	29	chr19	8800377	8800467	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-4.9121
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	94781859	94781877	protein_coding	Cradd	intron	ENSMUSG00000045867	ProperStrand	25	2	-10.0611
chr14	47808947	47808963	protein_coding	Gch1	utr5	ENSMUSG00000037580	NonProperStrand	31	chr3	123210907	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-5.5392
chr8	113022843	113022860	misc_RNA	AC069308.1	.	ENSMUSG00000093112	ProperStrand	1	chr17	75147044	75150408	protein_coding	Ttc27	exon	ENSMUSG00000024078	ProperStrand	14	1	-inf
chr13	62420228	62420247	LTR	ORR1D-int	MaLR	chr13ORR1D-int62419884	ProperStrand	1	chr9	64022854	64022919	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-inf
chr13	29095359	29095377	LTR	RMER6A	ERVK	chr13RMER6A29094888	ProperStrand	2	chr17	24665419	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-12.3390
chr13	101541415	101541495	protein_coding	Cenph	intron	ENSMUSG00000045273	ProperStrand	5	chr19	8800365	8800455	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-8.5453
chr11	115133195	115133285	protein_coding	Fdxr	exon	ENSMUSG00000018861	ProperStrand	5	chr2	26493405	26493485	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-14.3090
chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr5	115940301	115940406	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	5	-3.1304
chr2	148320507	148320597	LINE	L1Md_A	L1	chr2L1Md_A148319895	ProperStrand	1	chr7	54441831	54441921	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-inf
chr1	59539683	59540628	protein_coding	Fzd7	exon	ENSMUSG00000041075	ProperStrand	373	chr4	131865867	131865971	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	10	-4.8696
chrX	98791565	98791582	protein_coding	Taf1	exon	ENSMUSG00000031314	ProperStrand	61	chr17	24857717	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	6	-13.5532
chr14	45949538	45949554	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	chr15	81479753	81479797	protein_coding	Ep300	exon	ENSMUSG00000055024	ProperStrand	118	1	-8.5673
chr12	70413651	70415416	protein_coding	Nemf	exon	ENSMUSG00000020982	ProperStrand	77	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.8297
chr12	107139565	107139645	LTR	LTR16C	ERVL	chr12LTR16C107139520	ProperStrand	1	chr12	107139731	107139821	LTR	MT2A	ERVL	chr12MT2A107139636	NonProperStrand	1	1	-inf
chr16	59555214	59555230	protein_coding	Crybg3	utr5	ENSMUSG00000022723	ProperStrand	18	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-11.0322
chr1	36393378	36393431	protein_coding	4632411B12Rik	utr3	ENSMUSG00000010453	ProperStrand	24	chr11	68715166	68715183	protein_coding	Rpl26	utr5	ENSMUSG00000060938	ProperStrand	130	1	-13.6161
chrX	69515827	69515844	protein_coding	Gabre	exon	ENSMUSG00000031340	NonProperStrand	3	chr16	23110912	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chrX	131340540	131340630	protein_coding	Armcx2	exon	ENSMUSG00000033436	ProperStrand	12	chr7	118219581	118219661	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-7.3600
chr5	65696423	65696452	protein_coding	Rfc1	intron	ENSMUSG00000029191	ProperStrand	53	chr5	106325542	106325559	protein_coding	Zfp326	exon	ENSMUSG00000029290	ProperStrand	29	1	-15.0424
chr13	101463584	101463618	protein_coding	Ccdc125	exon	ENSMUSG00000048924	ProperStrand	6	chr9	15119725	15119768	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-7.1405
chr9	95379689	95387639	protein_coding	2610101N10Rik	intron	ENSMUSG00000032407	ProperStrand	56	chr3	123210854	123210933	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	4	-8.1717
chr18	35747314	35747384	protein_coding	Matr3	exon	ENSMUSG00000037236	ProperStrand	90	chr4	131865411	131865501	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-3.2529
chrX	130496426	130496668	protein_coding	Sytl4	exon	ENSMUSG00000031255	ProperStrand	169	chr9	59525441	59525485	protein_coding	Pkm2	intron	ENSMUSG00000032294	ProperStrand	1296	1	-5.1445
chr2	56968378	56968396	protein_coding	Nr4a2	intron	ENSMUSG00000026826	ProperStrand	24	chr10	11010668	11010734	protein_coding	Fbxo30	exon	ENSMUSG00000047648	ProperStrand	7	1	-inf
chr11	69481366	69481432	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	chr11	115275138	115275168	tRNA	tRNA1023-ArgTCG	.	721907	ProperStrand	15	1	-5.8683
mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	3	-5.4919
chr9	70258679	70260686	protein_coding	Ccnb2	exon	ENSMUSG00000032218	ProperStrand	54	chr17	24665425	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-5.1450
chr7	30042916	30042946	protein_coding	Spint2	intron	ENSMUSG00000074227	ProperStrand	82	chrX	143918834	143918892	snoRNA	ENSMUSG00000084421_SNORA35	.	ENSMUSG00000084421	ProperStrand	293	2	-15.0262
chr2	73688949	73689003	protein_coding	Atf2	exon	ENSMUSG00000027104	ProperStrand	37	chrX	99322363	99322425	protein_coding	Pin4	exon	ENSMUSG00000079480	ProperStrand	2	2	-inf
chr3	95466738	95466756	protein_coding	Mcl1	utr3	ENSMUSG00000038612	ProperStrand	75	chr7	25790953	25790969	protein_coding	Atp1a3	utr5	ENSMUSG00000040907	ProperStrand	66	1	-12.6737
chr2	127356161	127356177	protein_coding	Prom2	exon	ENSMUSG00000027376	NonProperStrand	10	chr4	131908800	131908890	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.3231
chr15	72493834	72493894	protein_coding	Trappc9	intron	ENSMUSG00000047921	ProperStrand	44	chr9	15119722	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.1801
chr7	117189863	117189943	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr15	98350145	98350269	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	9	-3.5999
chr19	4907673	4907786	protein_coding	Dpp3	exon	ENSMUSG00000063904	ProperStrand	36	chr11	68887039	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-5.1266
chr9	78326945	78327120	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr11	6520348	6520428	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	2	-2.5051
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr11	75267486	75267502	protein_coding	Wdr81	utr5	ENSMUSG00000045374	NonProperStrand	2	1	-15.2570
chr5	74591388	74591478	protein_coding	Rasl11b	utr5	ENSMUSG00000049907	ProperStrand	4	chr7	117166749	117166829	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-10.4200
chr8	126430948	126430966	protein_coding	Nup133	intron	ENSMUSG00000039509	ProperStrand	59	chr19	8800354	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-3.5610
chr2	27936467	27938439	protein_coding	Fcnb	exon	ENSMUSG00000026835	ProperStrand	11	chr5	121655015	121655100	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-7.0917
chr15	82980136	82980175	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr16	18240846	18240936	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	4	-10.6324
chr12	17552948	17553085	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr1	88247741	88247854	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	8	-1.1773
chr7	105864601	105864660	protein_coding	Prkrir	exon	ENSMUSG00000030753	ProperStrand	12	chr16	55812885	55812901	protein_coding	Nfkbiz	exon	ENSMUSG00000035356	NonProperStrand	3	1	-inf
chr11	12166989	12167029	protein_coding	Cobl	exon	ENSMUSG00000020173	ProperStrand	133	chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	1	-7.4760
chr4	125853446	125853485	protein_coding	Thrap3	exon	ENSMUSG00000043962	ProperStrand	84	chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	1	-7.9205
mmu-miR-6240	5	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr2	179771176	179771276	protein_coding	Psma7	utr3	ENSMUSG00000027566	ProperStrand	45	1	-6.4720
chr7	150747811	150748903	protein_coding	Cars	exon	ENSMUSG00000010755	ProperStrand	62	chr9	45198928	45199653	protein_coding	Fxyd6	exon	ENSMUSG00000066705	NonProperStrand	108	1	-12.0671
chr4	116826548	116826953	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	chr14	119693352	119693368	protein_coding	Hs6st3	intron	ENSMUSG00000053465	NonProperStrand	134	1	-8.7487
chr11	106942664	106942764	protein_coding	Bptf	exon	ENSMUSG00000040481	ProperStrand	70	chr4	131865912	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.5345
chr13	90238585	90238638	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	chr7	86611342	86611377	tRNA	tRNA387-ArgTCG	.	304125	ProperStrand	77	2	-12.9901
chr13	111144158	111144174	protein_coding	Gapt	exon	ENSMUSG00000046006	ProperStrand	2	chr4	131908243	131908357	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-8.3123
chr11	100353917	100354866	protein_coding	Acly	exon	ENSMUSG00000020917	ProperStrand	183	chr3	108357372	108357462	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	2	-4.4038
chr11	12154651	12154741	protein_coding	Cobl	exon	ENSMUSG00000020173	ProperStrand	133	chr11	68886931	68887011	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	2	-4.7016
chrX	138159145	138159161	protein_coding	Irs4	exon	ENSMUSG00000054667	NonProperStrand	98	chr18	73693169	73693187	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-4.5750
chr11	78313939	78313956	protein_coding	Vtn	exon	ENSMUSG00000017344	ProperStrand	188	chr16	23110455	23110557	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-1.6285
chr13	101266751	101266797	protein_coding	Ocln	utr3	ENSMUSG00000021638	ProperStrand	3	chr13	8756716	8766308	protein_coding	Adarb2	utr3	ENSMUSG00000052551	ProperStrand	292	1	-16.4928
chr9	108959675	108959758	protein_coding	Shisa5	utr3	ENSMUSG00000025647	ProperStrand	43	chr10	127521200	127521271	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	6	-inf
chr5	74489543	74489563	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr11	6416277	6416293	protein_coding	Myo1g	exon	ENSMUSG00000020437	ProperStrand	18	1	-8.0291
chr2	34726093	34726110	protein_coding	Psmd5	intron	ENSMUSG00000026869	NonProperStrand	4	chr5	121655016	121655065	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-9.2889
chr9	62225142	62225410	protein_coding	Anp32a	exon	ENSMUSG00000032249	ProperStrand	75	chr1	88247803	88247836	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	4	-14.7060
chr6	93742378	93742394	protein_coding	Magi1	exon	ENSMUSG00000045095	ProperStrand	106	chr11	97643018	97643076	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.5596
chr7	50114360	50114475	protein_coding	Gm2381	intron	ENSMUSG00000092225	ProperStrand	9	chr18	35716852	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-18.5284
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	83107806	83107903	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	1	-0.8074
chr14	20587905	20587970	protein_coding	Nid2	exon	ENSMUSG00000021806	ProperStrand	372	chr3	152329971	152329988	protein_coding	Ak5	intron	ENSMUSG00000039058	ProperStrand	10	1	-13.3243
chr9	20451113	20451181	protein_coding	Ubl5	utr3	ENSMUSG00000084786	ProperStrand	11	chr6	115757992	115758066	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-8.8917
chr7	13516162	13516188	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	NonProperStrand	4	chr16	23111389	23111489	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	NonProperStrand	38	1	-19.4518
chr6	113118507	113118525	protein_coding	Lhfpl4	utr3	ENSMUSG00000042873	ProperStrand	47	chr15	79913302	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.0488
chr7	17594283	17594389	protein_coding-noncoding	Ppp5c	utr3	ENSMUSG00000003099	ProperStrand	4	chr4	131908689	131908758	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-inf
chr13	19069019	19069035	protein_coding	Amph	intron	ENSMUSG00000021314	ProperStrand	35	chr9	50816824	50816841	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	1	-12.8982
chr19	10700444	10701104	protein_coding	Ddb1	exon	ENSMUSG00000024740	ProperStrand	304	chr12	60141470	60141509	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	3	-9.0766
chr16	23110549	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	chr9	15116994	15117014	snoRNA	ENSMUSG00000077614_SNORA40	.	ENSMUSG00000077614	ProperStrand	54	1	-2.6430
chr10	80083417	80083461	SINE	MIR3	MIR	chr10MIR380083420	ProperStrand	2	chr1	93320500	93320517	protein_coding	Per2	exon	ENSMUSG00000055866	NonProperStrand	44	2	-inf
chr10	116786169	116786186	protein_coding	Cpsf6	utr3	ENSMUSG00000055531	ProperStrand	86	chr4	131908357	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.9394
chr14	59854881	59854933	protein_coding	Rcbtb1	utr3	ENSMUSG00000035469	ProperStrand	39	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-9.8461
chr17	36019961	36020113	protein_coding	Dhx16	exon	ENSMUSG00000024422	ProperStrand	28	chr16	23110536	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-6.5063
chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	chr18	63238392	63238408	protein_coding	Fam38b	exon	ENSMUSG00000041482	NonProperStrand	50	1	-9.7640
chr2	168582096	168582113	protein_coding	Sall4	exon	ENSMUSG00000027547	ProperStrand	82	chr1	162965530	162965588	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.7195
chr10	46735496	46735586	LINE	Lx9	L1	chr10Lx946735476	NonProperStrand	1	chr10	46734998	46735088	Other	RMER1B	Other	chr10RMER1B46734571	NonProperStrand	1	1	-inf
mmu-miR-6240	3	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr9	40723966	40723983	protein_coding	4931429I11Rik	intron	ENSMUSG00000032023	NonProperStrand	49	1	-6.3032
chr11	87614627	87614643	antisense	Gm11505	.	ENSMUSG00000085872	ProperStrand	37	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-6.1613
chr5	65781726	65781794	protein_coding-noncoding	Rpl9	utr3	ENSMUSG00000047215	ProperStrand	2	chr3	68889033	68889123	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-10.5388
chr10	126482070	126482139	protein_coding	Mettl1	exon	ENSMUSG00000006732	ProperStrand	5	chr11	97642950	97643002	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-17.6936
chr4	49543841	49543857	protein_coding	Zfp189	utr3	ENSMUSG00000039634	ProperStrand	18	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-10.1739
chr8	13416894	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr3	68889041	68889205	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	10	-0.9907
chr3	142351261	142351279	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr10	75959166	75959226	protein_coding	Mcm3ap	exon	ENSMUSG00000001150	ProperStrand	95	1	-6.8812
chr2	26767737	26767781	protein_coding-noncoding	Rpl7a	utr5	ENSMUSG00000062647	ProperStrand	53	chr2	26767768	26767807	snoRNA	ENSMUSG00000064829_SNORD36	.	ENSMUSG00000064829	ProperStrand	98	6	-19.9972
chr16	90781865	90782372	protein_coding	Urb1	exon	ENSMUSG00000039929	ProperStrand	71	chr11	106362304	106362320	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-5.5127
chr4	43505657	43505721	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr18	21043710	21054463	protein_coding	Trappc8	exon	ENSMUSG00000033382	ProperStrand	43	1	-3.6800
chr9	78023109	78023155	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr14	20631334	20638909	protein_coding	2700060E02Rik	intron	ENSMUSG00000021807	ProperStrand	43	7	-inf
chr9	117969664	117969769	protein_coding	Azi2	intron	ENSMUSG00000039285	ProperStrand	12	chr4	131908809	131908849	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.9639
chr3	89228807	89230501	protein_coding	Shc1	exon	ENSMUSG00000042626	ProperStrand	18	chr14	76247793	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	4	-18.7455
chr1	173341933	173341949	protein_coding	Usf1	utr5	ENSMUSG00000026641	NonProperStrand	144	chr9	54768317	54768333	protein_coding	Agphd1	exon	ENSMUSG00000035878	NonProperStrand	19	1	-13.8892
chr4	45529398	45529416	protein_coding	Shb	intron	ENSMUSG00000044813	ProperStrand	32	chr17	13112532	13112572	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-5.8052
chr11	68886945	68887033	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	chr19	12086075	12086112	tRNA	tRNA637-ArgTCT	.	18588	ProperStrand	17	3	-15.2527
chr11	3583870	3583982	protein_coding	Morc2a	exon	ENSMUSG00000034543	ProperStrand	62	chr3	123210854	123210889	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.0132
chr17	56257328	56257344	LTR	RLTR25B	ERVK	chr17RLTR25B56257276	NonProperStrand	75	chr18	35716808	35716874	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.8113
chr11	99091514	99091532	protein_coding-noncoding	Smarce1	utr3	ENSMUSG00000037935	NonProperStrand	17	chr4	116828379	116828453	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-10.9381
chr6	125126744	125126834	protein_coding	Ncapd2	exon	ENSMUSG00000038252	ProperStrand	170	chr19	8963090	8963170	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-0.7860
chr13	9833551	9833654	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr5	74489202	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	7	-1.3880
chr11	77996317	77996360	protein_coding	Rpl23a	exon	ENSMUSG00000058546	ProperStrand	121	chr6	124665373	124665473	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	1	-5.5529
chr3	133150756	133150793	protein_coding	Tet2	exon	ENSMUSG00000040943	ProperStrand	192	chr19	8798488	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-3.0306
chr19	22498509	22498526	protein_coding	Trpm3	intron	ENSMUSG00000052387	ProperStrand	54	chr4	116826699	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-6.9908
chr1	193397901	193397923	protein_coding	Dtl	intron	ENSMUSG00000037474	ProperStrand	27	chr16	23110832	23110873	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.1875
chr1	172993122	172993139	protein_coding	Fcgr3	intron	ENSMUSG00000059498	ProperStrand	44	chr7	52381748	52381806	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-8.1949
chr1	172611387	172611404	protein_coding	Olfml2b	intron	ENSMUSG00000038463	ProperStrand	57	chr18	75160713	75160776	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	1	-9.2908
chr2	158184092	158184209	snoRNA	ENSMUSG00000064995_SNORA71	.	ENSMUSG00000064995	ProperStrand	430	chr3	68889023	68889187	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	2	-0.9650
chr11	59778155	59778172	protein_coding	Rasd1	exon	ENSMUSG00000049892	ProperStrand	4	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-17.4456
chr9	59518326	59518398	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chrX	99445995	99446012	protein_coding	Cited1	utr5	ENSMUSG00000051159	ProperStrand	72	1	-6.8163
chr8	109067715	109067743	protein_coding	Cdh3	exon	ENSMUSG00000061048	ProperStrand	62	chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	1	-9.7662
chr11	11867679	11870432	protein_coding	Grb10	exon	ENSMUSG00000020176	NonProperStrand	159	chr7	52381564	52381598	protein_coding	Rpl13a	exon	ENSMUSG00000074129	ProperStrand	269	1	-8.3552
chr4	122970474	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	chr10	23506324	23506347	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-1.5470
chr7	151765212	151765228	antisense	Gm10574	.	ENSMUSG00000073778	ProperStrand	357	chr7	117189864	117189922	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-2.8399
chr1	71341491	71341508	protein_coding	Abca12	exon	ENSMUSG00000050296	NonProperStrand	143	chr2	26494708	26494789	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.6554
chr3	89207128	89207194	protein_coding	Flad1	exon	ENSMUSG00000042642	ProperStrand	7	chr18	35716705	35716795	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-6.2708
chr9	45203191	45203217	protein_coding	Fxyd6	utr3	ENSMUSG00000066705	ProperStrand	30	chr16	23111454	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.3326
chr2	90235299	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	110345206	110345226	protein_coding	Map2k6	intron	ENSMUSG00000020623	ProperStrand	5	1	-9.5409
chr3	34549185	34549275	protein_coding	Sox2	utr5	ENSMUSG00000074637	ProperStrand	299	chr3	95980322	95980402	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-3.7550
chrX	7422819	7422850	protein_coding	Otud5	intron	ENSMUSG00000031154	ProperStrand	79	chr7	116663714	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.0527
chr19	59064715	59064732	protein_coding	4930506M07Rik	exon	ENSMUSG00000041362	ProperStrand	36	chr17	24857717	24857800	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.1916
chr16	4939532	4939576	protein_coding	Nudt16l1	exon	ENSMUSG00000022516	ProperStrand	7	chr10	23505150	23505215	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-5.0629
chrX	94536993	94537071	protein_coding	Eda2r	exon	ENSMUSG00000034457	ProperStrand	7	chr11	69483237	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-6.6014
chr1	133252370	133252444	protein_coding	Srgap2	intron	ENSMUSG00000026425	ProperStrand	299	chr7	30041648	30041694	protein_coding	Spint2	utr3	ENSMUSG00000074227	ProperStrand	82	1	-9.4674
chr4	108490179	108490208	protein_coding	Btf3l4	intron	ENSMUSG00000028568	NonProperStrand	2	chr11	97642952	97643082	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	NonProperStrand	10	1	-inf
chr2	129998642	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr15	98434646	98434663	protein_coding	Adcy6	exon	ENSMUSG00000022994	NonProperStrand	7	1	-12.5309
chr15	98761913	98764802	protein_coding	Tuba1b	utr3	ENSMUSG00000023004	ProperStrand	32	chr16	23111693	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-10.4256
chr11	95632103	95632149	protein_coding	Zfp652	utr3	ENSMUSG00000075595	ProperStrand	48	chr4	116828377	116828437	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-8.8299
chr11	83107806	83107896	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	chr6	71832622	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-1.5972
chr3	156224612	156224628	lincRNA	4930570G19Rik	exon	ENSMUSG00000085084	ProperStrand	326	chr9	120039532	120039585	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-0.7287
chr18	20739017	20739107	protein_coding	Dsg2	exon	ENSMUSG00000044393	ProperStrand	60	chr16	23111375	23111455	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.2589
chr14	31827478	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	chr2	91436286	91436309	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-1.6067
chr12	75033370	75033386	lincRNA	Gm15283	exon	ENSMUSG00000087700	ProperStrand	30	chr2	26494773	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.4006
chr15	79913288	79913346	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr5	143648356	143648373	protein_coding	Fbxl18	exon	ENSMUSG00000066640	ProperStrand	64	1	-3.4733
chr11	55296260	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	chr2	130103435	130103501	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-1.4550
chr1	174414502	174414602	protein_coding	Igsf9	utr5	ENSMUSG00000037995	ProperStrand	13	chrX	34622906	34622981	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-6.1263
chr17	4082515	4082589	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr3	89050581	89050602	protein_coding	Krtcap2	intron	ENSMUSG00000042747	ProperStrand	17	2	-inf
chr2	158454696	158454714	protein_coding-noncoding	Actr5	utr5	ENSMUSG00000037761	ProperStrand	2	chr3	123210851	123210933	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-inf
chr5	122025103	122025193	protein_coding	Aldh2	exon	ENSMUSG00000029455	ProperStrand	108	chr8	98269996	98270076	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-4.4070
chr10	63070812	63070829	protein_coding	Ctnna3	intron	ENSMUSG00000060843	ProperStrand	66	chr1	162965530	162965584	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.1039
chr2	168704986	168705006	LTR	RLTR25B	ERVK	chr2RLTR25B168704923	NonProperStrand	8	chr5	115939543	115939615	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	3	-18.8071
chr4	154533820	154533848	protein_coding	Ski	exon	ENSMUSG00000029050	ProperStrand	28	chr6	125115314	125115582	protein_coding	Gapdh	utr5	ENSMUSG00000057666	ProperStrand	356	1	-11.2858
chr11	95910149	95910221	protein_coding	Ube2z	utr3	ENSMUSG00000014349	ProperStrand	41	chr9	119266764	119266780	protein_coding	Xylb	exon	ENSMUSG00000035769	ProperStrand	8	1	-17.9350
chr13	58655210	58655254	protein_coding	Slc28a3	utr3	ENSMUSG00000021553	NonProperStrand	4	chr8	126520468	126520531	protein_coding	Taf5l	utr3	ENSMUSG00000038697	ProperStrand	23	2	-19.1358
chr13	65213898	65213915	protein_coding	Hiatl1	exon	ENSMUSG00000038212	NonProperStrand	2	chr16	23110962	23110999	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr4	137161718	137161818	protein_coding	Usp48	exon	ENSMUSG00000043411	ProperStrand	135	chr11	97642952	97642987	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.2168
chr19	5796882	5802379	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	37	-inf
chr9	118333374	118333474	LINE	L2b	L2	chr9L2b118333300	ProperStrand	1	chr4	55431651	55431670	lincRNA	Gm12505	exon	ENSMUSG00000087070	NonProperStrand	1	1	-inf
chr11	120209314	120209382	protein_coding	Actg1	exon	ENSMUSG00000062825	ProperStrand	178	chr2	26493364	26493397	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-1.8549
chr11	102152267	102152334	protein_coding	Atxn7l3	utr3	ENSMUSG00000059995	ProperStrand	24	chr11	106362338	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-7.6694
chr1	9742555	9742572	lincRNA	1700034P13Rik	exon	ENSMUSG00000085661	NonProperStrand	3	chr4	41150097	41150164	snoRNA	ENSMUSG00000089265_SNORD121A	.	ENSMUSG00000089265	ProperStrand	370	1	-16.0432
chr18	13142769	13142849	protein_coding	Impact	exon	ENSMUSG00000024423	ProperStrand	32	chr16	23110966	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-3.1962
chr9	113757655	113760966	protein_coding	Clasp2	exon	ENSMUSG00000033392	ProperStrand	30	chr8	32260335	32260385	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-5.9845
chr8	84645944	84645960	protein_coding	Inpp4b	utr3	ENSMUSG00000037940	NonProperStrand	33	chr11	6428108	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-7.2160
chr15	98887743	98887823	protein_coding	Prph	exon	ENSMUSG00000023484	ProperStrand	8	chr14	120877875	120877894	protein_coding	Rap2a	utr5	ENSMUSG00000051615	ProperStrand	8	4	-18.6983
chr2	24825186	24827046	protein_coding	Wdr85	exon	ENSMUSG00000026975	ProperStrand	323	chr8	126440218	126441330	protein_coding	Nup133	exon	ENSMUSG00000039509	ProperStrand	59	1	-9.9741
chr7	54363729	54363745	protein_coding	Ptpn5	intron	ENSMUSG00000030854	NonProperStrand	2	chr11	106362556	106362617	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-14.8626
chrX	70237450	70237472	miRNA	Mir2137	.	ENSMUSG00000089357	ProperStrand	50	chr12	3968611	3968627	protein_coding	Efr3b	exon	ENSMUSG00000020658	ProperStrand	142	1	-11.9516
chr4	137104412	137105463	protein_coding	Hspg2	exon	ENSMUSG00000028763	NonProperStrand	18	chr16	23111756	23111810	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.0433
chr9	96989961	96993524	protein_coding-noncoding	Slc25a36	utr3	ENSMUSG00000032449	ProperStrand	10	chr2	8963289	8963379	pseudogene	Gm13217	.	ENSMUSG00000082953	ProperStrand	1	1	-inf
chr13	19684241	19684257	protein_coding	Epdr1	utr3	ENSMUSG00000002808	ProperStrand	46	chr11	11180424	11180440	protein_coding	Zpbp	utr3	ENSMUSG00000020193	NonProperStrand	5	1	-18.6318
chr8	61391767	61391783	protein_coding	BC030500	exon	ENSMUSG00000049946	NonProperStrand	12	chr18	35716811	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-12.4231
chr1	187115293	187118667	protein_coding	Iars2	exon	ENSMUSG00000026618	ProperStrand	68	chr4	20548793	20548811	protein_coding	Nkain3	intron	ENSMUSG00000055761	ProperStrand	34	1	-14.2057
chr5	122822031	122822131	protein_coding	1500011H22Rik	utr5	ENSMUSG00000029463	ProperStrand	24	chr16	23110551	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.1305
chr7	135111434	135111481	protein_coding	Fus	intron	ENSMUSG00000030795	ProperStrand	162	chr19	24974671	24974689	protein_coding	Foxd4	exon	ENSMUSG00000051490	NonProperStrand	3	1	-17.8829
chr6	49067195	49067285	protein_coding	Igf2bp3	exon	ENSMUSG00000029814	ProperStrand	23	chr4	131908264	131908344	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.9964
chr2	104407207	104407227	lincRNA	4930500J02Rik	intron	ENSMUSG00000086454	ProperStrand	5	chr6	122227243	122227259	protein_coding	Klrg1	intron	ENSMUSG00000030114	ProperStrand	6	1	-19.1288
chr5	112865460	112865476	protein_coding	Sez6l	exon	ENSMUSG00000058153	ProperStrand	81	chr1	162965547	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-4.7816
chr1	74903046	74903136	protein_coding	Cdk5r2	utr3	ENSMUSG00000090071	ProperStrand	1	chr7	117189966	117190046	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-inf
chr16	3856858	3856879	protein_coding	Zfp174	utr3	ENSMUSG00000054939	NonProperStrand	166	chr5	111121063	111121150	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-4.4563
chr19	43579408	43579425	protein_coding	Got1	intron	ENSMUSG00000025190	NonProperStrand	147	chr4	131399490	131399506	protein_coding	Mecr	exon	ENSMUSG00000028910	NonProperStrand	109	1	-10.3157
chr7	117166726	117166806	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	chr9	64143781	64143871	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	2	-1.0154
chr10	12902322	12902670	protein_coding	Ltv1	exon	ENSMUSG00000019814	ProperStrand	76	chr7	107793051	107793068	protein_coding	Plekhb1	utr3	ENSMUSG00000030701	NonProperStrand	3	1	-19.2548
chr12	4872273	4872317	protein_coding-noncoding	Mfsd2b	utr3	ENSMUSG00000037336	ProperStrand	2	chr11	118363337	118363353	protein_coding	Rbfox3	intron	ENSMUSG00000025576	NonProperStrand	16	1	-inf
chr12	87855418	87859788	protein_coding	Esrrb	exon	ENSMUSG00000021255	ProperStrand	254	chr9	40612098	40612164	snoRNA	ENSMUSG00000075924_Snord14d	.	ENSMUSG00000075924	ProperStrand	131	1	-8.8557
chr14	79266335	79266413	protein_coding	1300010F03Rik	intron	ENSMUSG00000058997	ProperStrand	29	chr17	24857770	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.5901
chr14	69866956	69867056	protein_coding	Slc25a37	intron	ENSMUSG00000034248	ProperStrand	37	chr16	23110964	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-4.0730
chr2	90894366	90894382	protein_coding	Psmc3	utr5	ENSMUSG00000002102	ProperStrand	8	chr16	23111374	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.8232
chr8	72334599	72334615	protein_coding	Gmip	exon	ENSMUSG00000036246	ProperStrand	102	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-9.3637
chr9	123065930	123065946	protein_coding	Clec3b	exon	ENSMUSG00000025784	ProperStrand	58	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-8.9947
chr13	30338190	30338207	protein_coding	Mboat1	utr3	ENSMUSG00000038732	NonProperStrand	148	chr11	6519831	6519931	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-6.1532
chr17	6963907	6987028	protein_coding	Ezr	utr5	ENSMUSG00000052397	ProperStrand	126	chr17	24857717	24857816	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.1700
chr14	70117234	70117314	protein_coding	R3hcc1	intron	ENSMUSG00000034194	ProperStrand	12	chr17	33959601	33959691	protein_coding	Kank3	utr3	ENSMUSG00000042099	ProperStrand	64	1	-16.4359
chr17	81344133	81344150	protein_coding	Tmem178	exon	ENSMUSG00000024245	ProperStrand	67	chr16	23110454	23110526	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.2755
chr5	122854212	122854229	protein_coding	Arpc3	exon	ENSMUSG00000029465	NonProperStrand	33	chr8	129468746	129468799	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-5.5742
chr8	72613823	72613839	protein_coding	Hapln4	utr3	ENSMUSG00000007594	NonProperStrand	85	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-6.5433
chrX	71517861	71517951	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	chr1	87983864	87983944	snoRNA	ENSMUSG00000077274_SNORA26	.	ENSMUSG00000077274	ProperStrand	361	1	-3.1234
chr2	4829164	4829180	protein_coding	Sephs1	utr3	ENSMUSG00000026662	NonProperStrand	271	chr10	39978310	39978366	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-2.6508
chr2	158451026	158451043	protein_coding	Actr5	exon	ENSMUSG00000037761	NonProperStrand	94	chr17	35299507	35299599	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-3.9242
chr4	56804925	56804970	protein_coding	Ikbkap	exon	ENSMUSG00000028431	ProperStrand	44	chr1	88247741	88247800	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-5.7030
chr11	72582264	72582315	protein_coding	Ankfy1	utr3	ENSMUSG00000020790	ProperStrand	68	chr10	23505152	23505178	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.0674
chr6	55002210	55003128	protein_coding	Gars	exon	ENSMUSG00000029777	ProperStrand	71	chr4	131866155	131866245	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	6	-17.5412
chr2	164332947	164333027	protein_coding	Pigt	exon	ENSMUSG00000017721	ProperStrand	45	chr11	69483139	69483229	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	12	-19.9879
chr5	92871820	92871897	SINE	B1_Mur3	Alu	chr5B1_Mur392871822	NonProperStrand	2	chr17	45704136	45704153	protein_coding	Slc35b2	exon	ENSMUSG00000037089	ProperStrand	55	2	-inf
chr17	91052102	91052203	protein_coding	Nrxn1	intron	ENSMUSG00000024109	ProperStrand	34	chr7	5027290	5027345	protein_coding	U2af2	intron	ENSMUSG00000030435	ProperStrand	103	15	-19.4699
chr2	83646083	83646137	protein_coding	Itgav	utr3	ENSMUSG00000027087	ProperStrand	59	chr7	29136570	29136634	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	4	-8.7545
chr4	134893777	134893826	protein_coding	Srrm1	exon	ENSMUSG00000028809	ProperStrand	142	chr16	23111704	23111816	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-0.7317
chr2	103619525	103619615	protein_coding	Caprin1	exon	ENSMUSG00000027184	ProperStrand	145	chr6	71832562	71832642	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	2	-6.5887
chr1	53980430	53980446	protein_coding	Hecw2	intron	ENSMUSG00000042807	ProperStrand	39	chr13	49779667	49779697	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-7.8741
chr7	116663634	116663725	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	chr4	132394346	132394456	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	6	-2.4102
chr18	7621115	7621199	protein_coding	Mpp7	intron	ENSMUSG00000057440	ProperStrand	7	chr16	23111389	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-12.6567
chrX	34667269	34667285	protein_coding	Nkap	exon	ENSMUSG00000016409	NonProperStrand	133	chrX	71517834	71517871	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-4.9885
chr9	20918701	20918717	protein_coding	Tyk2	exon	ENSMUSG00000032175	ProperStrand	29	chr5	121655099	121655148	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.1397
chr11	99885311	99885327	protein_coding	Krt33b	exon	ENSMUSG00000057723	NonProperStrand	352	chr1	39605639	39605696	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-3.9090
chrX	103395578	103395600	protein_coding	Pgk1	exon	ENSMUSG00000062070	ProperStrand	484	chr1	88252838	88252899	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	4	-9.4614
chr4	118808927	118809017	protein_coding	Slc2a1	exon	ENSMUSG00000028645	ProperStrand	361	chr12	112779177	112779257	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-1.6119
chr16	23111704	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	chr9	95524994	95525035	snoRNA	ENSMUSG00000065346_SNORA4	.	ENSMUSG00000065346	ProperStrand	142	5	-5.1224
chr16	20645295	20645334	protein_coding	Ece2	utr3	ENSMUSG00000022842	ProperStrand	25	chr6	84538206	84538223	protein_coding	Cyp26b1	utr5	ENSMUSG00000063415	NonProperStrand	21	2	-19.2556
chr11	42440243	42440259	protein_coding	Gabrb2	exon	ENSMUSG00000007653	ProperStrand	248	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	2	-7.4148
chr12	100438178	100438194	protein_coding	Foxn3	intron	ENSMUSG00000033713	NonProperStrand	6	chr10	79617983	79618026	protein_coding	Midn	exon	ENSMUSG00000035621	ProperStrand	36	1	-18.4705
chr11	120681119	120681169	protein_coding	Fasn	exon	ENSMUSG00000025153	ProperStrand	298	chr2	130103916	130104006	protein_coding	Nop56	exon	ENSMUSG00000027405	ProperStrand	125	1	-8.6310
chr14	58445405	58445509	protein_coding	Mrp63	exon	ENSMUSG00000021967	ProperStrand	3	chr1	88247548	88247564	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	3	-inf
chr5	64792049	64792070	LTR	MLT1H	MaLR	chr5MLT1H64791748	NonProperStrand	30	chr2	152495263	152495287	protein_coding	H13	utr5	ENSMUSG00000019188	ProperStrand	15	1	-17.6229
chr8	108184167	108184257	protein_coding	Ctcf	intron	ENSMUSG00000005698	ProperStrand	75	chr5	130300473	130300553	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	4	-8.0164
chr2	158182156	158182177	lincRNA	9430008C03Rik	intron	ENSMUSG00000085385	ProperStrand	1039	chr7	125987333	125987471	protein_coding	2310008H09Rik	utr3	ENSMUSG00000030980	ProperStrand	42	1	-8.3299
chr17	35198790	35198880	protein_coding	Ddah2	utr3	ENSMUSG00000007039	ProperStrand	23	chr4	116883451	116883531	snRNA	ENSMUSG00000070237_U5	.	ENSMUSG00000070237	ProperStrand	154	12	-19.9171
chr15	81110991	81111009	SINE	ID4	ID	chr15ID481110956	ProperStrand	272	chr11	106362622	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	3	-10.6275
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr7	112629988	112630005	protein_coding	Prkcdbp	intron	ENSMUSG00000037060	NonProperStrand	43	1	-9.2624
chr11	90436985	90437006	protein_coding	Stxbp4	intron	ENSMUSG00000020546	ProperStrand	15	chr5	92485087	92485217	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	1	-11.5550
chr18	37911790	37911806	protein_coding	Pcdhga9	intron	ENSMUSG00000023036	ProperStrand	245	chr8	13939645	13939679	protein_coding	Fbxo25	utr3	ENSMUSG00000038365	ProperStrand	7	1	-14.9273
chr7	149569356	149569397	protein_coding	Ctsd	exon	ENSMUSG00000007891	ProperStrand	60	chr18	35714268	35716840	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-5.8728
chr4	131908381	131908461	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr3	86249335	86336036	protein_coding	Lrba	exon	ENSMUSG00000028080	ProperStrand	39	1	-8.1212
chrX	49970851	49970867	antisense	A630012P03Rik	.	ENSMUSG00000055110	NonProperStrand	10	chr2	57090809	57090826	protein_coding	Gpd2	utr5	ENSMUSG00000026827	ProperStrand	93	1	-16.0856
chr1	78472766	78472813	protein_coding	Farsb	exon	ENSMUSG00000026245	ProperStrand	40	chr18	35714219	35716840	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	3	-10.1987
chr7	52382039	52382224	protein_coding-noncoding	Rpl13a	utr3	ENSMUSG00000074129	ProperStrand	106	chr7	52382221	52382315	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	10	-19.7260
chr15	75397522	75397538	protein_coding	Ly6h	utr5	ENSMUSG00000022577	NonProperStrand	4	chr7	29136525	29136599	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-7.7378
chr1	162965529	162967520	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr9	15119630	15119970	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	75	-0.9958
chr13	113711961	113717472	protein_coding	Skiv2l2	exon	ENSMUSG00000016018	ProperStrand	55	chr1	59539683	59539700	protein_coding	Fzd7	utr5	ENSMUSG00000041075	ProperStrand	373	1	-9.8280
chr11	97642952	97642971	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	chr8	112363199	112363258	snoRNA	ENSMUSG00000077549_Snord71	.	ENSMUSG00000077549	ProperStrand	196	1	-0.7581
chr9	15114380	15114431	protein_coding	Taf1d	exon	ENSMUSG00000031939	ProperStrand	363	chr15	79913288	79913333	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-1.5865
chr2	26332539	26332590	protein_coding	Notch1	exon	ENSMUSG00000026923	ProperStrand	145	chr13	24824232	24824248	protein_coding	Fam65b	utr3	ENSMUSG00000036006	ProperStrand	51	1	-11.8698
chr2	112208079	112208109	protein_coding	Tmem85	utr5	ENSMUSG00000027131	ProperStrand	19	chr5	115940325	115940406	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	7	-19.8285
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr2	154171682	154171700	protein_coding	Cdk5rap1	exon	ENSMUSG00000027487	ProperStrand	75	1	-5.4666
chr13	63644800	63644823	protein_coding	Ptch1	exon	ENSMUSG00000021466	ProperStrand	50	chr19	10703668	10703770	protein_coding	Ddb1	utr3	ENSMUSG00000024740	ProperStrand	304	2	-16.4272
mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr15	81560306	81560322	protein_coding	Rangap1	utr5	ENSMUSG00000022391	NonProperStrand	35	1	-6.9727
chr15	21670952	21671042	LINE	Lx3C	L1	chr15Lx3C21670525	ProperStrand	1	chr15	21671105	21671185	LINE	Lx3C	L1	chr15Lx3C21671080	NonProperStrand	1	1	-inf
chr1	162966243	162966269	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	chr13	90238586	90238664	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	1	-3.0955
chr1	145506238	145506255	protein_coding	Cdc73	intron	ENSMUSG00000026361	NonProperStrand	26	chr5	130300419	130300472	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.0304
chr7	126226434	126226524	LTR	IAPEY2_LTR	ERVK	chr7IAPEY2_LTR126226438	ProperStrand	1	chr4	147982217	147982297	protein_coding	Masp2	intron	ENSMUSG00000028979	NonProperStrand	1	1	-inf
chr13	63612936	63612952	protein_coding	Ptch1	exon	ENSMUSG00000021466	NonProperStrand	118	chr1	38093033	38093062	protein_coding	Eif5b	exon	ENSMUSG00000026083	ProperStrand	118	1	-10.5970
chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	chr7	67123714	67123759	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	3	-6.2273
chr17	27772164	27772221	protein_coding	Rps10	utr5	ENSMUSG00000052146	ProperStrand	94	chrX	103395562	103395611	protein_coding	Pgk1	exon	ENSMUSG00000062070	ProperStrand	484	3	-17.8362
chr5	53138722	53138817	protein_coding	Pi4k2b	intron	ENSMUSG00000029186	ProperStrand	27	chr9	15118287	15118322	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	10	-inf
chr7	13880756	13880846	protein_coding	Lig1	exon	ENSMUSG00000056394	ProperStrand	89	chr7	134018431	134018632	protein_coding	Taok2	exon	ENSMUSG00000059981	ProperStrand	47	1	-13.0170
chr12	17555942	17556042	protein_coding	Odc1	intron	ENSMUSG00000011179	ProperStrand	173	chr17	24857818	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-1.5997
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr12	17552953	17553085	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-1.2169
chr8	75800552	75800599	protein_coding	Large	intron	ENSMUSG00000004383	ProperStrand	48	chr8	73419655	73419765	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.5376
chr10	62045178	62045211	protein_coding	Ddx21	exon	ENSMUSG00000020075	ProperStrand	137	chrX	34622931	34623021	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-1.7754
chr11	51087080	51088764	protein_coding	Clk4	exon	ENSMUSG00000020385	ProperStrand	4	chr6	115758050	115758097	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-11.0996
chr11	3831429	3831519	protein_coding	Tcn2	utr5	ENSMUSG00000020432	ProperStrand	7	chr8	129468837	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-8.7511
chr4	140669698	140669757	protein_coding	D4Ertd22e	utr3	ENSMUSG00000040842	ProperStrand	23	chr7	116664819	116664909	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-4.3088
chr7	31235496	31235835	protein_coding	Kirrel2	exon	ENSMUSG00000036915	NonProperStrand	1	chr11	62416618	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-inf
chr2	80297373	80297389	LINE	L1MB8	L1	chr2L1MB880297262	ProperStrand	53	chr19	8799603	8799645	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-7.0132
chr15	81654345	81654435	protein_coding	Tef	utr3	ENSMUSG00000022389	ProperStrand	12	chr17	35089180	35089230	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	3	-18.5084
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr2	155923812	155923828	protein_coding	Rbm12	exon	ENSMUSG00000089824	ProperStrand	26	1	-9.4232
chr2	9985901	9985917	protein_coding	Atp5c1	exon	ENSMUSG00000025781	ProperStrand	138	chr17	35087894	35087965	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	2	-6.1290
mmu-miR-141-3p	2	22	miRNA	mmu-miR-141-3p	.	mmu-miR-141-3p	ProperStrand	1	chr12	103636437	103636537	protein_coding	Lgmn	exon	ENSMUSG00000021190	ProperStrand	18	1	-inf
chr3	82707847	82707863	antisense	4930564K09Rik	.	ENSMUSG00000086273	ProperStrand	48	chr11	69465572	69465745	protein_coding	Fxr2	exon	ENSMUSG00000018765	ProperStrand	40	1	-14.5849
chr6	125111977	125115312	protein_coding	Gapdh	utr5	ENSMUSG00000057666	ProperStrand	356	chr17	24857721	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	9	-6.4498
chr15	58013103	58014398	protein_coding	Fbxo32	exon	ENSMUSG00000022358	NonProperStrand	3	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	2	-inf
chr8	122071529	122071640	protein_coding	Mbtps1	utr5	ENSMUSG00000031835	ProperStrand	81	chr7	116663673	116663713	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.0123
chr19	30969167	30969184	protein_coding	Prkg1	exon	ENSMUSG00000052920	NonProperStrand	41	chr4	116826699	116826766	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	2	-12.0927
chr2	155833697	155833713	protein_coding	6430550D23Rik	utr5	ENSMUSG00000074646	NonProperStrand	2	chr11	6428097	6428156	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-10.4671
chr4	43505651	43505751	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr14	105552830	105554100	protein_coding	Rbm26	exon	ENSMUSG00000022119	ProperStrand	60	1	-3.0703
chr11	3649570	3649587	protein_coding	Osbp2	intron	ENSMUSG00000020435	ProperStrand	60	chr2	119749624	119749724	protein_coding	Mga	exon	ENSMUSG00000033943	ProperStrand	180	1	-11.1093
chr3	107134153	107134178	protein_coding	Rbm15	exon	ENSMUSG00000048109	ProperStrand	82	chr18	35716788	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-3.0953
chr10	80619800	80619841	protein_coding	Pias4	exon	ENSMUSG00000004934	ProperStrand	43	chr8	73419558	73419865	protein_coding	Rpl18a	exon	ENSMUSG00000045128	ProperStrand	394	1	-10.2145
chr11	107517559	107522421	protein_coding	Helz	exon	ENSMUSG00000020721	ProperStrand	60	chr11	68620768	68622320	protein_coding	Myh10	exon	ENSMUSG00000020900	ProperStrand	91	1	-12.4765
chr17	35197640	35197813	protein_coding	Ddah2	exon	ENSMUSG00000007039	ProperStrand	23	chr17	23960766	23960782	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	1	-13.4156
chr1	163900535	163900564	protein_coding	Pigc	utr5	ENSMUSG00000026698	ProperStrand	7	chr8	129468744	129468868	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	2	-14.1318
chr11	78036391	78036483	protein_coding	Supt6h	intron	ENSMUSG00000002052	ProperStrand	119	chr8	87426786	87426804	protein_coding	Klf1	exon	ENSMUSG00000054191	NonProperStrand	70	3	-20.1936
chr8	129468763	129468869	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	chr5	92485094	92485217	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	2	-1.4979
chr3	69121012	69121028	protein_coding	Ppm1l	utr5	ENSMUSG00000027784	ProperStrand	32	chr9	114633152	114633228	protein_coding	Dync1li1	utr3	ENSMUSG00000032435	ProperStrand	33	1	-15.7611
chr2	130109497	130109513	protein_coding	Idh3b	exon	ENSMUSG00000027406	ProperStrand	146	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.7672
chr3	88949489	88949505	protein_coding	Pklr	utr3	ENSMUSG00000041237	NonProperStrand	2	chr16	23111757	23111824	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-8.9529
chr14	65977559	65977577	protein_coding	Zfp395	utr5	ENSMUSG00000034522	ProperStrand	15	chr4	131908759	131908849	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-9.0076
chr14	47399876	47403853	protein_coding	Cnih	exon	ENSMUSG00000015759	ProperStrand	10	chr4	131908236	131908298	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.5892
chr2	128485694	128486583	protein_coding	Anapc1	exon	ENSMUSG00000014355	ProperStrand	38	chr6	122273386	122273466	protein_coding	Phc1	exon	ENSMUSG00000040669	ProperStrand	158	1	-12.2920
chr13	9833562	9833653	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr9	26814832	26814890	protein_coding	Thyn1	utr3	ENSMUSG00000035443	ProperStrand	13	3	-17.9940
chr4	134479844	134479860	protein_coding	D4Wsu53e	exon	ENSMUSG00000037266	NonProperStrand	50	chr5	115939531	115939578	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-8.2302
chr2	27312498	27315017	protein_coding	Brd3	exon	ENSMUSG00000026918	ProperStrand	85	chr18	35716840	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.6197
chr7	148196403	148196464	protein_coding	Ifitm3	exon	ENSMUSG00000025492	ProperStrand	12	chr4	131866238	131866283	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	3	-15.7700
chr7	125311392	125311482	protein_coding	Smg1	exon	ENSMUSG00000030655	ProperStrand	70	chr9	120037975	120038055	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-4.4107
chr19	5609827	5609844	protein_coding	Kat5	intron	ENSMUSG00000024926	ProperStrand	20	chr3	96025814	96025830	protein_coding	Hist2h2be	utr3	ENSMUSG00000068854	ProperStrand	3	1	-inf
chr4	57727889	57727906	protein_coding	Gm20459	intron	ENSMUSG00000089945	NonProperStrand	34	chr5	121655101	121655126	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.8293
chr11	121121133	121121150	protein_coding	Foxk2	exon	ENSMUSG00000039275	NonProperStrand	2	chr12	17552948	17552994	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-12.4939
chr5	100855903	100855943	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr10	25161822	25163571	protein_coding	Epb4.1l2	utr5	ENSMUSG00000019978	ProperStrand	105	3	-12.8585
chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr3	116496543	116496643	protein_coding	Agl	exon	ENSMUSG00000033400	ProperStrand	18	1	-8.8757
chr17	73590319	73590342	protein_coding	Lclat1	utr3	ENSMUSG00000054469	ProperStrand	10	chr5	108336372	108336462	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-8.4814
chrX	20249387	20249415	protein_coding	Uba1	exon	ENSMUSG00000001924	ProperStrand	156	chr7	116663662	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-2.0745
chr4	155482313	155482335	LTR	RMER21A	ERV1	chr4RMER21A155481984	ProperStrand	7	chr2	26494709	26494761	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-7.3461
chr4	149191837	149191871	rRNA	n-R5s193	.	ENSMUSG00000064798	ProperStrand	17	chr1	162965555	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.6984
chr17	27649644	27649660	protein_coding	Grm4	intron	ENSMUSG00000063239	ProperStrand	147	chr5	115939537	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-6.0903
chr2	90235313	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	180447407	180447425	protein_coding	2310003C23Rik	utr5	ENSMUSG00000027573	NonProperStrand	4	1	-10.0500
chr9	103255927	103255975	protein_coding	Cdv3	utr3	ENSMUSG00000032803	ProperStrand	68	chrX	71517922	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-6.2980
chr4	106164708	106164724	protein_coding	Bsnd	utr5	ENSMUSG00000025418	ProperStrand	22	chr1	88252877	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-8.6544
chr13	9833559	9833652	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr15	83630589	83630607	protein_coding	Mpped1	exon	ENSMUSG00000041708	ProperStrand	6	3	-19.5563
chr9	21602970	21602986	protein_coding	Kank2	utr5	ENSMUSG00000032194	ProperStrand	196	chr9	15119632	15119755	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-0.8628
chr12	61377263	61377353	LINE	L1Md_T	L1	chr12L1Md_T61373482	ProperStrand	1	chr7	54443923	54444003	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-inf
chr1	107743298	107743317	protein_coding	Tnfrsf11a	utr3	ENSMUSG00000026321	NonProperStrand	100	chr6	71832550	71832650	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	2	-7.6634
chr11	120693630	120693648	protein_coding	Ccdc57	intron	ENSMUSG00000048445	ProperStrand	12	chr9	44142959	44142999	protein_coding	H2afx	exon	ENSMUSG00000049932	ProperStrand	137	1	-14.9361
chr5	139717347	139717416	protein_coding	Sun1	exon	ENSMUSG00000036817	ProperStrand	108	chr17	13112508	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	3	-8.6386
chr13	23775729	23775778	protein_coding	Hist1h2ac	exon	ENSMUSG00000069270	ProperStrand	22	chr7	29136587	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.1896
chr9	41872091	41872181	protein_coding	Sorl1	exon	ENSMUSG00000049313	ProperStrand	112	chr19	8963024	8963082	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.3124
chr10	75322121	75322263	protein_coding	Mif	exon	ENSMUSG00000033307	ProperStrand	146	chr1	162967515	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-3.5114
chr1	71623306	71623325	protein_coding	Atic	exon	ENSMUSG00000026192	ProperStrand	30	chr17	50244364	50244381	protein_coding	Rftn1	intron	ENSMUSG00000039316	ProperStrand	11	1	-17.9580
chr10	127741512	127745223	protein_coding	Pan2	exon	ENSMUSG00000005682	ProperStrand	53	chr19	11271200	11271217	protein_coding	Ms4a13	utr5	ENSMUSG00000057240	ProperStrand	59	1	-13.5960
chr14	21371419	21371477	protein_coding	Usp54	exon	ENSMUSG00000034235	ProperStrand	20	chr15	79913287	79913346	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-5.7112
chr17	28455041	28455284	protein_coding	Fance	exon	ENSMUSG00000007570	ProperStrand	23	chr7	29136621	29136649	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.1043
chr7	19590072	19590089	protein_coding	Irf2bp1	exon	ENSMUSG00000044030	ProperStrand	16	chr8	108220967	108221153	protein_coding	Rltpr	exon	ENSMUSG00000050357	ProperStrand	8	2	-19.4826
chr14	51427246	51427326	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr5	130295418	130295508	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	3	-1.6317
chr6	122678348	122678372	protein_coding	Slc2a3	utr3	ENSMUSG00000003153	ProperStrand	682	chr19	59534008	59534026	protein_coding	Emx2	exon	ENSMUSG00000043969	NonProperStrand	87	1	-7.7089
chr7	26057527	26057544	protein_coding	Cic	exon	ENSMUSG00000005442	ProperStrand	80	chr16	23111727	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.4655
chrX	138662762	138662779	protein_coding	Nxt2	utr5	ENSMUSG00000042271	ProperStrand	20	chr11	77995191	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-8.3851
chr1	120807421	120807511	protein_coding	Gli2	intron	ENSMUSG00000048402	ProperStrand	148	chr10	90581040	90581120	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-3.1206
chr9	119148120	119148210	protein_coding	Oxsr1	utr3	ENSMUSG00000036737	ProperStrand	33	chr11	69481398	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-4.3164
chr3	134492650	134492666	protein_coding	Tacr3	exon	ENSMUSG00000028172	NonProperStrand	1	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr2	93784059	93784076	LTR	MTEa	MaLR	chr2MTEa93783777	NonProperStrand	50	chr3	123210878	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.3689
chr11	97224586	97224602	protein_coding	Socs7	exon	ENSMUSG00000038485	NonProperStrand	3	chr4	131908809	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-6.9471
chr7	52713343	52714584	protein_coding	Ftl1	utr3	ENSMUSG00000050708	ProperStrand	807	chr4	122968584	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	2	-2.9133
chr13	51743546	51743580	protein_coding	Cks2	intron	ENSMUSG00000062248	ProperStrand	26	chr9	120039546	120039636	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-4.9026
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr14	119008849	119008868	protein_coding	Abcc4	intron	ENSMUSG00000032849	NonProperStrand	24	1	-6.2570
chr13	21845293	21845393	protein_coding	Hist1h2ak	utr3	ENSMUSG00000063021	ProperStrand	30	chr11	69483136	69483191	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.6945
chr7	26519578	26519674	protein_coding	Hnrnpul1	exon	ENSMUSG00000040725	ProperStrand	84	chr11	69483136	69483204	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.8963
chr11	72503524	72525662	protein_coding	Ankfy1	utr5	ENSMUSG00000020790	ProperStrand	68	chr5	67068252	67070902	protein_coding	Uchl1	exon	ENSMUSG00000029223	ProperStrand	29	1	-14.5331
chr17	34250354	34250407	protein_coding	Brd2	exon	ENSMUSG00000024335	ProperStrand	69	chr9	15119665	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	4	-8.7283
chr14	66182143	66182201	protein_coding	Elp3	exon	ENSMUSG00000022031	ProperStrand	71	chr9	15119639	15119676	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-6.2626
chr14	75730810	75730888	protein_coding	Zc3h13	exon	ENSMUSG00000022000	ProperStrand	42	chr19	8799859	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	2	-9.2308
chr3	94301747	94301836	protein_coding	Snx27	utr3	ENSMUSG00000028136	ProperStrand	24	chr4	140121137	140121153	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	2	-19.5554
chr9	15136491	15136591	protein_coding	5830418K08Rik	exon	ENSMUSG00000046111	ProperStrand	465	chr1	162968214	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-2.9183
chr9	15119631	15119766	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	chr4	131866637	131866673	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	3	-0.7214
chr8	87197034	87197142	protein_coding	Nacc1	exon	ENSMUSG00000001910	ProperStrand	130	chr17	35087897	35087940	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-3.7288
chr4	154962072	154962763	protein_coding	Nadk	exon	ENSMUSG00000029063	ProperStrand	25	chr8	108219391	108219450	protein_coding	Rltpr	exon	ENSMUSG00000050357	ProperStrand	8	1	-18.8748
chr13	41731288	41731326	protein_coding	Tmem170b	utr3	ENSMUSG00000087370	ProperStrand	15	chr1	63225653	63225706	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	6	-inf
chr7	151637048	151637112	protein_coding	Cttn	intron	ENSMUSG00000031078	ProperStrand	33	chr4	106246500	106250798	protein_coding	Dhcr24	exon	ENSMUSG00000034926	ProperStrand	94	1	-13.6137
chr14	76247766	76247856	protein_coding	Tpt1	intron	ENSMUSG00000060126	ProperStrand	236	chr12	106269477	106269557	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-1.7482
chr2	76471660	76471676	protein_coding	Prkra	exon	ENSMUSG00000002731	NonProperStrand	65	chr2	31656749	31656814	protein_coding	Abl1	exon	ENSMUSG00000026842	ProperStrand	131	1	-11.5842
chr5	122701646	122701667	protein_coding	Tctn1	exon	ENSMUSG00000038593	ProperStrand	34	chr7	148634748	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	4	-15.8805
chr11	121009240	121009330	protein_coding	Tex19.1	utr3	ENSMUSG00000039329	ProperStrand	12	chr9	15119670	15119750	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.6882
chr19	57119395	57119411	protein_coding	Ablim1	exon	ENSMUSG00000025085	NonProperStrand	6	chr9	120039534	120039603	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-7.9123
chr5	112865459	112865475	protein_coding	Sez6l	exon	ENSMUSG00000058153	ProperStrand	81	chr16	23111383	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	5	-5.7800
chr10	127954364	127954442	protein_coding	Esyt1	exon	ENSMUSG00000025366	ProperStrand	31	chr13	56353448	56353465	protein_coding	Neurog1	utr5	ENSMUSG00000048904	ProperStrand	105	1	-13.5236
chr3	115433486	115433505	SINE	B1F	Alu	chr3B1F115433482	ProperStrand	1	chr11	68886974	68887037	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-inf
chr19	7535855	7535884	protein_coding	Rtn3	intron	ENSMUSG00000024758	ProperStrand	35	chr8	73419657	73419755	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-6.9429
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr11	44626180	44626197	protein_coding	Ebf1	intron	ENSMUSG00000057098	NonProperStrand	6	1	-12.7286
chr8	72566940	72572415	protein_coding	Sugp1	utr5	ENSMUSG00000011306	ProperStrand	20	chr19	8963027	8963127	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.2716
chr6	125616698	125616798	protein_coding	Vwf	exon	ENSMUSG00000001930	ProperStrand	20	chr5	130295493	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-7.4328
chr12	85350481	85350499	protein_coding	Acot1	utr5	ENSMUSG00000072949	ProperStrand	72	chr19	8963030	8963130	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-3.5819
chr2	84515999	84516079	protein_coding	Tmx2	intron	ENSMUSG00000050043	ProperStrand	31	chr18	35716741	35716831	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.3259
chr13	9833554	9833679	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	2	-1.1060
chr4	153394085	153394143	protein_coding	Lrrc47	utr3	ENSMUSG00000029028	ProperStrand	30	chr16	23110964	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0481
chr3	65140296	65140386	antisense	A730090N16Rik	.	ENSMUSG00000090120	ProperStrand	14	chr11	101466256	101466336	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	1	-11.8311
chr1	66753092	66761189	protein_coding	Rpe	exon	ENSMUSG00000026005	ProperStrand	18	chr11	97642952	97643026	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-7.8531
chr9	120037898	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	chr13	90238598	90238716	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	8	-10.7364
chr3	94863675	94863755	protein_coding	Pip5k1a	utr3	ENSMUSG00000028126	ProperStrand	47	chr19	8800359	8800449	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	28	-inf
chr2	148601649	148601739	Simple_repeat	(TCTA)n	Simple_repeat	chr2(TCTA)n148601643	ProperStrand	1	chr2	27001892	27001972	antisense	Gm13399	.	ENSMUSG00000085008	NonProperStrand	8	1	-inf
chrX	131122516	131122572	protein_coding	Rpl36a	utr3	ENSMUSG00000079435	ProperStrand	53	chr8	73419658	73419715	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-8.4249
chr1	73971351	73971370	protein_coding	Tns1	exon	ENSMUSG00000055322	NonProperStrand	27	chr7	52378418	52378480	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	1	-10.1147
chr6	119408665	119408684	protein_coding	Wnt5b	intron	ENSMUSG00000030170	NonProperStrand	3	chr10	90581049	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-11.1027
chr7	135115784	135123657	protein_coding	Fus	exon	ENSMUSG00000030795	ProperStrand	162	chr16	23110968	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	8	-1.4991
chr10	127800479	127800495	protein_coding	Coq10a	utr3	ENSMUSG00000039914	NonProperStrand	15	chr15	34370631	34370665	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-10.2093
chr4	134896915	134898349	protein_coding	Srrm1	exon	ENSMUSG00000028809	ProperStrand	142	chr16	23110550	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.1415
chr1	75447246	75447262	protein_coding	Accn4	utr5	ENSMUSG00000033007	NonProperStrand	23	chr9	120038468	120038526	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.8435
chr7	50523027	50523117	LTR	RLTR44E	ERVK	chr7RLTR44E50522822	ProperStrand	1	chr10	110918574	110918654	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-inf
chr1	133252342	133252386	protein_coding	Srgap2	intron	ENSMUSG00000026425	ProperStrand	299	chr7	54441668	54441725	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	1	-8.3842
chr8	125202944	125202961	protein_coding	Cbfa2t3	intron	ENSMUSG00000006362	ProperStrand	41	chr1	162965980	162966036	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-4.3197
chr7	57041565	57041581	protein_coding	Prmt3	exon	ENSMUSG00000030505	ProperStrand	89	chr11	97643004	97643060	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-3.3381
chr6	128271959	128272023	protein_coding	Tulp3	utr3	ENSMUSG00000001521	ProperStrand	18	chr3	93250306	93250322	protein_coding	Tchh	exon	ENSMUSG00000052415	ProperStrand	26	1	-17.2234
chr1	173341933	173341949	protein_coding	Usf1	utr5	ENSMUSG00000026641	NonProperStrand	144	chr1	162967490	162967512	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-1.9596
chr7	52263155	52263235	protein_coding	Scaf1	exon	ENSMUSG00000038406	ProperStrand	81	chr19	8963089	8963179	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.7905
chr11	80965641	80965658	protein_coding	Accn1	exon	ENSMUSG00000020704	NonProperStrand	228	chr4	131865855	131865926	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-1.1586
chr2	90235298	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	118147134	118147153	protein_coding	Ret	utr5	ENSMUSG00000030110	ProperStrand	3	1	-10.7414
chr7	149562562	149562624	protein_coding	Ctsd	exon	ENSMUSG00000007891	ProperStrand	60	chr19	8800356	8800446	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-6.0065
chr5	66088857	66088875	protein_coding	Pds5a	intron	ENSMUSG00000029202	ProperStrand	62	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-7.6741
chr15	82005670	82007620	protein_coding	Srebf2	exon	ENSMUSG00000022463	ProperStrand	592	chr10	82456766	82456785	protein_coding	Chst11	intron	ENSMUSG00000034612	ProperStrand	170	1	-6.6609
chr4	46508075	46508109	snoRNA	ENSMUSG00000064410_SNORA36	.	ENSMUSG00000064410	ProperStrand	133	chr3	123210854	123210894	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-1.8475
chr3	52388277	52388294	SINE	B4A	B4	chr3B4A52388218	ProperStrand	169	chr11	115755281	115755552	protein_coding	Recql5	exon	ENSMUSG00000020752	ProperStrand	5	1	-16.4016
chr8	16089015	16089034	protein_coding	Csmd1	intron	ENSMUSG00000060924	NonProperStrand	25	chr16	23111704	23111738	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.4223
chr9	103247235	103248095	protein_coding	Topbp1	exon	ENSMUSG00000032555	ProperStrand	81	chr9	120038531	120038630	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	14	-inf
chr1	183282762	183282779	protein_coding	Cnih3	utr5	ENSMUSG00000026514	NonProperStrand	32	chr11	62418038	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-6.8011
chr15	82980163	82980225	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr4	122968584	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	2	-1.8116
chr18	44709574	44709590	protein_coding	Mcc	intron	ENSMUSG00000071856	NonProperStrand	8	chr8	129468801	129468852	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-8.4652
chr16	91405676	91405692	protein_coding	Ifnar2	utr3	ENSMUSG00000022971	NonProperStrand	23	chr9	104064711	104064985	protein_coding	Dnajc13	exon	ENSMUSG00000032560	ProperStrand	60	1	-15.2650
chr4	116827010	116827319	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	chr1	162967551	162967570	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	15	-inf
chr1	173433175	173433275	protein_coding	B930036N10Rik	utr3	ENSMUSG00000091993	ProperStrand	150	chr1	162967501	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-1.8950
chr11	80707576	80707593	protein_coding	Accn1	exon	ENSMUSG00000020704	ProperStrand	69	chr15	5068409	5068478	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	2	-9.4428
chr19	44152824	44152870	protein_coding	Chuk	utr3	ENSMUSG00000025199	ProperStrand	9	chr13	90238599	90238620	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	2	-18.9452
chr12	17552964	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr8	113362433	113362490	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	1	-1.5175
chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	chr4	131865855	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-1.0024
chr19	3466498	3466564	protein_coding	Ppp6r3	exon	ENSMUSG00000024908	ProperStrand	63	chr5	114587275	114587304	protein_coding	Ung	exon	ENSMUSG00000029591	ProperStrand	20	2	-inf
chr2	120389450	120389539	protein_coding	Zfp106	utr5	ENSMUSG00000027288	ProperStrand	199	chr19	8800453	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-1.5112
chr11	4574448	4574509	protein_coding	Ascc2	intron	ENSMUSG00000020412	ProperStrand	27	chr1	89673763	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	2	-7.9302
chr17	23953327	23958533	protein_coding	Srrm2	exon	ENSMUSG00000039218	ProperStrand	521	chr15	34370545	34370664	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	12	-14.0331
chr11	113550041	113550079	protein_coding	D11Wsu47e	exon	ENSMUSG00000041623	ProperStrand	6	chr12	92811868	92811934	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	3	-18.9747
chr10	90565199	90565215	protein_coding	Ikbip	exon	ENSMUSG00000019975	ProperStrand	12	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-9.1155
chr13	12495445	12495477	protein_coding	Heatr1	exon	ENSMUSG00000050244	ProperStrand	74	chr1	39605650	39605696	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	2	-11.1529
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr15	73559007	73559023	protein_coding	Ptp4a3	intron	ENSMUSG00000059895	ProperStrand	45	1	-9.4827
chr11	120650994	120651194	protein_coding	Dus1l	exon	ENSMUSG00000025155	ProperStrand	24	chr4	131908729	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.6746
chr19	10934666	10934683	protein_coding	Tmem132a	exon	ENSMUSG00000024736	NonProperStrand	2	chr19	8800359	8800459	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-10.8391
chr6	142439110	142441017	protein_coding	Ldhb	exon	ENSMUSG00000030246	ProperStrand	224	chr5	108334228	108334318	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	4	-8.7125
chr2	90235315	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	87972359	87972375	SINE	RSINE1	B4	chr17RSINE187972335	ProperStrand	6	1	-9.1372
chrX	156615904	156615923	SINE	MIRb	MIR	chrXMIRb156615903	ProperStrand	1	chr1	72895681	72895704	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	1	-inf
chr11	8351354	8351433	protein_coding	Tns3	exon	ENSMUSG00000020422	ProperStrand	81	chrX	34622904	34622946	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	4	-9.3913
chr13	95767429	95767529	protein_coding	Wdr41	intron	ENSMUSG00000042015	ProperStrand	8	chr8	113366285	113366323	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	1	-13.3149
chr7	17492851	17492867	protein_coding	Ptgir	exon	ENSMUSG00000043017	NonProperStrand	2	chr16	23110898	23110923	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr5	118713299	118713354	protein_coding	2410131K14Rik	utr3	ENSMUSG00000032840	ProperStrand	6	chr9	120039533	120039623	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-7.9123
chr11	79057996	79058049	protein_coding	Wsb1	exon	ENSMUSG00000017677	ProperStrand	12	chr1	162965533	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-14.9409
chr4	116826699	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	chr9	15118246	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	7	-0.8181
chr5	90693058	90693147	protein_coding	Ankrd17	exon	ENSMUSG00000055204	ProperStrand	77	chr9	120039567	120039584	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.8709
chr4	155366536	155366553	protein_coding	B3galt6	exon	ENSMUSG00000050796	ProperStrand	40	chr7	29136581	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-5.3158
chr9	120038299	120039978	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	chr1	162965983	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	10	-13.3529
chr3	87342640	87342780	protein_coding	Etv3	utr3	ENSMUSG00000003382	ProperStrand	7	chr14	117324734	117324750	protein_coding	Gpc6	utr5	ENSMUSG00000058571	ProperStrand	28	1	-18.7651
chrX	138684918	138684936	LTR	ORR1D1-int	MaLR	chrXORR1D1-int138683832	NonProperStrand	1	chr5	100855902	100855968	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	1	-inf
chr13	54723202	54723218	protein_coding	Faf2	exon	ENSMUSG00000025873	ProperStrand	90	chr8	110007240	110007292	protein_coding	Wwp2	exon	ENSMUSG00000031930	ProperStrand	18	1	-14.9394
chr5	111322097	111514128	lincRNA	Ttc28	exon	ENSMUSG00000033209	ProperStrand	15	chr13	56276640	56276657	protein_coding	Tifab	utr3	ENSMUSG00000049625	NonProperStrand	4	1	-26.3461
chr19	8845191	8845230	protein_coding	Nxf1	utr3	ENSMUSG00000010097	ProperStrand	13	chr9	7861149	7861195	protein_coding	Birc3	exon	ENSMUSG00000032000	ProperStrand	4	1	-20.8300
chr10	129569352	129569442	LINE	L1_Mur3	L1	chr10L1_Mur3129569346	NonProperStrand	1	chr10	129569527	129569607	SINE	B1_Mus1	Alu	chr10B1_Mus1129569501	NonProperStrand	1	1	-inf
chr6	89306648	89306700	protein_coding	Plxna1	exon	ENSMUSG00000030084	ProperStrand	233	chr16	90775135	90776374	protein_coding	Urb1	exon	ENSMUSG00000039929	ProperStrand	71	1	-10.2545
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	31470122	31470162	protein_coding	Gtf3c2	exon	ENSMUSG00000029144	ProperStrand	22	2	-10.4561
chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	chr11	6520326	6520458	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	1	-3.1746
chr14	20588067	20588084	protein_coding	Nid2	exon	ENSMUSG00000021806	NonProperStrand	10	chrX	84483703	84483758	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-11.9088
chr14	45949538	45949554	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-2.6939
chr7	134341340	134341357	protein_coding	Tbc1d10b	utr3	ENSMUSG00000042492	ProperStrand	187	chr14	76247754	76247778	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-2.1440
chr2	165958156	165958217	protein_coding	Sulf2	exon	ENSMUSG00000006800	ProperStrand	171	chr11	121168449	121168475	protein_coding	Foxk2	utr3	ENSMUSG00000039275	ProperStrand	38	1	-12.1338
chr7	143781768	143781784	LINE	Lx9	L1	chr7Lx9143781715	ProperStrand	23	chr2	130102033	130102056	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-7.2605
chr1	54534932	54534948	SINE	B3A	B2	chr1B3A54534840	NonProperStrand	2	chr4	131908300	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-8.3123
mmu-miR-6240	4	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr7	28104709	28104755	protein_coding	Ltbp4	exon	ENSMUSG00000040488	ProperStrand	91	1	-5.0909
chr11	60001911	60001927	protein_coding	Rai1	exon	ENSMUSG00000062115	NonProperStrand	81	chr6	125136468	125136568	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	1	-5.8505
chr9	55057284	55061717	protein_coding	Fbxo22	exon	ENSMUSG00000032309	ProperStrand	79	chr18	73693167	73693190	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	2	-8.2250
chr1	16665661	16665692	protein_coding	Tmem70	intron	ENSMUSG00000025940	ProperStrand	2	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-12.6096
chr17	38681950	38682040	LINE	Lx3A	L1	chr17Lx3A38681370	ProperStrand	1	chrX	7938086	7938176	LINE	Lx3_Mus	L1	chrXLx3_Mus7937986	ProperStrand	1	1	-inf
chr4	79650810	79650857	pseudogene	Gm11410	.	ENSMUSG00000083219	ProperStrand	47	chr16	23109051	23109090	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	3	-17.4764
chr11	20596048	20596117	protein_coding	Aftph	intron	ENSMUSG00000049659	ProperStrand	9	chr11	116704531	116704549	protein_coding	Jmjd6	utr5	ENSMUSG00000056962	ProperStrand	92	3	-20.1234
chr8	112195297	112195387	protein_coding	2400003C14Rik	utr3	ENSMUSG00000031729	ProperStrand	30	chr16	23110909	23110991	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-6.7134
chr16	20331678	20331695	protein_coding	Abcc5	utr3	ENSMUSG00000022822	ProperStrand	30	chr7	29136573	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-6.1415
chr1	193646176	193646205	protein_coding	Nek2	exon	ENSMUSG00000026622	ProperStrand	12	chr16	23110896	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-6.8317
chr4	151706433	151706456	protein_coding	Rpl22	exon	ENSMUSG00000028936	ProperStrand	112	chr2	25068679	25068811	protein_coding	4933433C11Rik	exon	ENSMUSG00000036770	NonProperStrand	1	1	-inf
chr4	147991534	147991573	protein_coding	Tardbp	utr3	ENSMUSG00000041459	ProperStrand	120	chr17	24857800	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-2.3742
chr15	43081758	43083036	protein_coding	Eif3e	exon	ENSMUSG00000022336	ProperStrand	17	chr4	131908687	131908804	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.3002
chr2	90235315	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	102926980	102926997	protein_coding	Apip	intron	ENSMUSG00000010911	NonProperStrand	26	1	-6.0972
chr15	96262257	96262797	protein_coding	Scaf11	exon	ENSMUSG00000033228	ProperStrand	37	chr9	119559992	119560008	protein_coding	Scn10a	exon	ENSMUSG00000034533	ProperStrand	37	2	-19.2796
chr2	6047884	6047984	protein_coding	5430407P10Rik	intron	ENSMUSG00000045319	ProperStrand	4	chr10	23506278	23506319	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-12.6067
chr11	6428058	6428166	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr1	161270456	161270555	snoRNA	ENSMUSG00000089536_Scarna3a	.	ENSMUSG00000089536	ProperStrand	247	3	-3.1141
chr7	28960013	28960072	protein_coding	Fbl	exon	ENSMUSG00000046865	ProperStrand	52	chr6	105628014	105628032	protein_coding	Cntn4	intron	ENSMUSG00000064293	ProperStrand	4	1	-19.4442
chr14	19101044	19102906	protein_coding	Rpl15	exon	ENSMUSG00000012405	ProperStrand	145	chr16	23111696	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-3.6613
chr7	13615276	13615453	protein_coding	Trim28	exon	ENSMUSG00000005566	ProperStrand	296	chr4	131866155	131866235	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-1.0668
chr16	30067284	30067332	protein_coding	Hes1	exon	ENSMUSG00000022528	ProperStrand	6	chr16	23110454	23110544	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-6.9463
chr15	81110991	81111009	SINE	ID4	ID	chr15ID481110956	ProperStrand	272	chr7	24779188	24779213	SINE	ID_B1	B4	chr7ID_B124779183	NonProperStrand	54	1	-10.4955
chr2	26493499	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr12	111894821	111894875	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	1	-1.8358
chr5	77774397	77777309	protein_coding	Polr2b	exon	ENSMUSG00000029250	ProperStrand	68	chr5	130295524	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	2	-8.2527
chr11	86133501	86141361	protein_coding	Med13	exon	ENSMUSG00000034297	ProperStrand	23	chr5	74489595	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	2	-9.2413
mmu-miR-6240	3	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr3	137849424	137849440	protein_coding	4930579F01Rik	utr5	ENSMUSG00000012042	NonProperStrand	156	1	-4.0627
chr12	45347784	45347803	protein_coding	Pnpla8	intron	ENSMUSG00000036257	ProperStrand	4	chr9	15119631	15119663	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-8.0470
chr17	46442581	46442950	protein_coding	Abcc10	exon	ENSMUSG00000032842	ProperStrand	20	chr8	98270015	98270081	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	3	-17.3576
chr7	148587780	148587870	protein_coding	Taldo1	exon	ENSMUSG00000025503	ProperStrand	28	chr6	71832605	71832685	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-7.1235
chr19	6212244	6213003	protein_coding	1700123I01Rik	exon	ENSMUSG00000024786	ProperStrand	6	chr19	8799025	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-10.5557
chr12	68765361	68765387	LINE	L1_Mus2	L1	chr12L1_Mus268763857	ProperStrand	2	chr7	116664841	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-9.7350
chr11	86891382	86891417	protein_coding	1200011M11Rik	utr3	ENSMUSG00000020495	ProperStrand	8	chr11	69483199	69483234	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-10.4333
chr1	91955975	91956000	protein_coding	Iqca	intron	ENSMUSG00000026301	ProperStrand	13	chr4	128900261	128900366	protein_coding	C77080	exon	ENSMUSG00000050390	ProperStrand	48	2	-23.8318
chr11	108783076	108783093	protein_coding	Axin2	utr5	ENSMUSG00000000142	NonProperStrand	81	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-7.1420
chr12	52472722	52473417	protein_coding	G2e3	exon	ENSMUSG00000035293	ProperStrand	53	chr11	116938694	116938751	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-6.4043
chr2	111752373	111752389	protein_coding	Olfr1306	exon	ENSMUSG00000074954	NonProperStrand	11	chr11	6520372	6520458	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	1	-11.1723
chr12	8497828	8497850	Simple_repeat	(CA)n	Simple_repeat	chr12(CA)n8497657	NonProperStrand	1	chr6	85388836	85388860	protein_coding	Smyd5	exon	ENSMUSG00000033706	ProperStrand	107	1	-inf
chr3	105758864	105758887	protein_coding	Atp5f1	exon	ENSMUSG00000000563	ProperStrand	28	chr7	121370513	121370613	protein_coding	Copb1	exon	ENSMUSG00000030754	ProperStrand	25	1	-16.5858
chr10	127499938	127513235	protein_coding	Ptges3	intron	ENSMUSG00000071072	ProperStrand	89	chr9	120039533	120039657	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	4	-9.3241
chr2	103830224	103830242	protein_coding	4931422A03Rik	intron	ENSMUSG00000046085	ProperStrand	5	chr10	23505152	23505250	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-9.7958
chr8	89385954	89408730	protein_coding	N4bp1	utr5	ENSMUSG00000031652	ProperStrand	98	chr8	129468746	129468846	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-3.4946
chr11	107903808	108204953	protein_coding	Prkca	exon	ENSMUSG00000050965	ProperStrand	48	chr17	35089180	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	2	-9.6500
chr6	78763206	78763224	LTR	RMER20B	ERVK	chr6RMER20B78762903	NonProperStrand	4	chr7	52382237	52382292	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-13.9501
chr2	26493419	26493509	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr17	71324891	71324945	protein_coding	Myl12b	exon	ENSMUSG00000034868	ProperStrand	35	1	-7.2666
chr10	20000357	20000456	protein_coding	Mtap7	utr3	ENSMUSG00000019996	ProperStrand	43	chr1	162967523	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-6.8835
chr5	143874599	143874615	protein_coding	Rnf216	utr5	ENSMUSG00000045078	NonProperStrand	29	chr18	35716792	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-11.7166
chr5	108334195	108334281	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	chr13	49779747	49779802	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	12	-10.6101
chr9	54751995	54754413	protein_coding	Ireb2	exon	ENSMUSG00000032293	ProperStrand	45	chr13	18083523	18083540	protein_coding	1600012F09Rik	exon	ENSMUSG00000075054	ProperStrand	3	3	-inf
chr4	116875204	116875235	snRNA	ENSMUSG00000070228_U5	.	ENSMUSG00000070228	ProperStrand	131	chr8	98269959	98270002	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	2	-6.7779
chr15	76481031	76481121	protein_coding	Cyhr1	intron	ENSMUSG00000053929	ProperStrand	16	chr9	120038572	120038652	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.5625
chr18	34506792	34506808	protein_coding	Reep5	exon	ENSMUSG00000005873	ProperStrand	19	chr15	98350142	98350255	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-7.0352
chr17	53071061	53071078	LINE	L1_Mus4	L1	chr17L1_Mus453067946	NonProperStrand	21	chr14	73971874	73971923	protein_coding	Sucla2	intron	ENSMUSG00000022110	ProperStrand	20	1	-17.4608
chr2	86138158	86138174	protein_coding	Olfr1052	exon	ENSMUSG00000047149	NonProperStrand	119	chr1	59761671	59761715	snoRNA	ENSMUSG00000089093_Snord11	.	ENSMUSG00000089093	ProperStrand	193	1	-9.5957
chr11	33059988	33060394	protein_coding	Npm1	exon	ENSMUSG00000057113	ProperStrand	352	chr2	130103751	130103804	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	7	-19.0159
chr11	51981263	51981325	lincRNA	Gm16953	intron	ENSMUSG00000087101	ProperStrand	20	chr1	162966008	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-9.3940
chr7	119253776	119253792	protein_coding	Usp47	utr3	ENSMUSG00000059263	ProperStrand	40	chr17	35087895	35087946	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-5.9954
chr15	97617135	97617225	protein_coding	Slc48a1	intron	ENSMUSG00000081534	ProperStrand	16	chr10	90581059	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-7.4331
chr4	149024839	149024858	protein_coding	Pik3cd	exon	ENSMUSG00000039936	ProperStrand	151	chr9	15119729	15119766	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.1902
chr18	10052132	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr16	23107544	23107560	protein_coding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	356	1	-5.2832
chr9	115156337	115156371	protein_coding	Stt3b	intron	ENSMUSG00000032437	ProperStrand	66	chr4	131865855	131865965	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	5	-8.6521
chr7	148447003	148447155	protein_coding	Phrf1	exon	ENSMUSG00000038611	ProperStrand	86	chr11	69483237	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-5.1994
chr14	38393478	38393558	LINE	L1MD1	L1	chr14L1MD138393465	ProperStrand	1	chr14	38393635	38393725	SINE	B1F	Alu	chr14B1F38393568	NonProperStrand	1	1	-inf
chr4	130310084	130318696	protein_coding	Pum1	exon	ENSMUSG00000028580	ProperStrand	131	chr11	69483194	69483237	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.2400
chr6	94776857	94776876	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	chr17	35299509	35299599	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-1.1751
chr17	45705266	45705298	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr3	58327545	58327580	protein_coding	Serp1	utr3	ENSMUSG00000027808	ProperStrand	4	2	-20.9015
chr12	114383512	114383547	protein_coding	Crip2	utr3	ENSMUSG00000006356	ProperStrand	30	chr7	20020056	20020241	protein_coding	Mark4	exon	ENSMUSG00000030397	ProperStrand	18	1	-17.1461
chr10	12902322	12902670	protein_coding	Ltv1	exon	ENSMUSG00000019814	ProperStrand	76	chr6	70794802	70794820	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	1	-10.9463
chrX	66879782	66879799	protein_coding	Aff2	intron	ENSMUSG00000031189	NonProperStrand	4	chr10	23505152	23505270	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-6.2798
chr15	96827201	96827261	protein_coding	Slc38a4	utr3	ENSMUSG00000022464	ProperStrand	139	chr5	115940328	115940407	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	11	-19.1627
chr6	57638553	57638569	protein_coding	Pigy	utr3	ENSMUSG00000043162	NonProperStrand	18	chr5	108334210	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	4	-19.1741
chr9	8001670	8004167	protein_coding	Yap1	exon	ENSMUSG00000053110	ProperStrand	68	chr2	26494763	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.8837
chr5	144675502	144675524	protein_coding	Pms2	exon	ENSMUSG00000079109	ProperStrand	21	chr5	108334196	108334322	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-6.8940
chr17	85411810	85411883	protein_coding	Ppm1b	intron	ENSMUSG00000061130	ProperStrand	36	chr1	173041632	173041649	tRNA	tRNA710-ValCAC	.	829113	ProperStrand	206	1	-11.8709
chr11	29147138	29147154	protein_coding	Ccdc104	utr5	ENSMUSG00000020462	NonProperStrand	2	chr9	7792286	7792324	protein_coding	Tmem123	utr3	ENSMUSG00000050912	ProperStrand	17	1	-inf
chr5	124842819	124842909	protein_coding	Sbno1	intron	ENSMUSG00000038095	ProperStrand	134	chr17	35299550	35299630	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-3.2713
chr15	99239770	99239874	protein_coding	Tmbim6	utr3	ENSMUSG00000023010	ProperStrand	64	chr4	122968679	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-6.1535
chr15	84818249	84818322	protein_coding	5031439G07Rik	utr5	ENSMUSG00000036046	ProperStrand	3	chr6	52965701	52965719	protein_coding	Jazf1	intron	ENSMUSG00000063568	ProperStrand	43	1	-inf
chr4	43505816	43505906	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr8	12429957	12429976	protein_coding	Gm5607	exon	ENSMUSG00000047935	NonProperStrand	7	2	-11.9591
chr16	23110454	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	chr13	49779667	49779807	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	16	-2.6393
chr4	132388822	132388856	protein_coding	Ppp1r8	exon	ENSMUSG00000028882	ProperStrand	13	chr17	32197416	32197432	protein_coding	Rrp1b	exon	ENSMUSG00000058392	NonProperStrand	39	1	-17.1847
chr9	48843704	48843757	protein_coding	Usp28	exon	ENSMUSG00000032267	ProperStrand	63	chr9	120039565	120039655	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.2300
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr5	115248646	115249494	protein_coding	Ankrd13a	exon	ENSMUSG00000041870	ProperStrand	22	1	-8.3801
chr12	41464082	41464099	protein_coding	Dock4	exon	ENSMUSG00000035954	ProperStrand	41	chr16	56035862	56035984	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	23	-23.5611
chr11	60351849	60351905	protein_coding	Alkbh5	utr5	ENSMUSG00000042650	ProperStrand	203	chr2	91436228	91436268	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	3	-11.9566
chr8	81343929	81344949	protein_coding	Lsm6	utr5	ENSMUSG00000031683	ProperStrand	13	chr4	131908236	131908276	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.0703
chrX	20259726	20259796	protein_coding	Uba1	utr3	ENSMUSG00000001924	ProperStrand	156	chr12	106269327	106269427	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-2.4172
chr2	157295540	157295640	protein_coding	Src	exon	ENSMUSG00000027646	ProperStrand	32	chr16	23111437	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.2238
chr15	61896215	61896300	lincRNA	Pvt1	intron	ENSMUSG00000072566	ProperStrand	51	chr5	99668488	99668505	protein_coding	Rasgef1b	intron	ENSMUSG00000029333	ProperStrand	19	1	-15.9702
chr15	76008590	76008680	protein_coding	Plec	exon	ENSMUSG00000022565	ProperStrand	186	chr5	130300479	130300495	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-0.8422
chr10	10673954	10673971	protein_coding	Grm1	intron	ENSMUSG00000019828	ProperStrand	38	chr18	35716698	35716806	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.9566
chr8	48928326	48928344	protein_coding	Wwc2	exon	ENSMUSG00000031563	ProperStrand	37	chr2	71299126	71299144	protein_coding	Metap1d	intron	ENSMUSG00000041921	ProperStrand	21	1	-16.3542
chr6	149256463	149256563	LTR	RLTR47_MM	ERV1	chr6RLTR47_MM149256167	ProperStrand	3	chr18	35716819	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-8.1910
chr5	108336380	108336445	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	chr10	127522378	127522416	snoRNA	ENSMUSG00000093245_AC131120.1	.	ENSMUSG00000093245	ProperStrand	77	2	-7.3343
chrX	80649513	80649531	protein_coding	Dmd	intron	ENSMUSG00000045103	ProperStrand	38	chr16	23110940	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.7634
chr9	109934632	109984700	protein_coding	Mtap4	exon	ENSMUSG00000032479	ProperStrand	188	chr7	116664805	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-1.7301
chr12	111733787	111733855	protein_coding	Ppp2r5c	intron	ENSMUSG00000017843	ProperStrand	36	chr17	24665440	24665463	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	3	-13.7512
chr10	80644728	80644773	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-0.7119
chr15	75877761	75890144	protein_coding	Scrib	utr3	ENSMUSG00000022568	ProperStrand	154	chr12	17552949	17553034	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	4	-11.1433
chrX	98600757	98600774	protein_coding	Zmym3	utr3	ENSMUSG00000031310	ProperStrand	17	chr5	74489595	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-6.2343
chr2	90235316	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chrX	135510687	135510703	protein_coding	Nrk	exon	ENSMUSG00000052854	ProperStrand	24	1	-6.2570
chr12	110848633	110888947	lincRNA	Rian	intron	ENSMUSG00000091793	ProperStrand	612	chr17	24857725	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	6	-1.1775
chr4	133404581	133404643	protein_coding	Rps6ka1	intron	ENSMUSG00000003644	ProperStrand	68	chr18	37911790	37911806	protein_coding	Pcdhga9	intron	ENSMUSG00000023036	ProperStrand	245	1	-10.2407
chr11	117221994	117222094	protein_coding	Sept9	utr3	ENSMUSG00000059248	ProperStrand	60	chr1	162967503	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-3.4744
chr14	56159294	56159314	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	chr18	35716763	35716885	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-2.0983
chr12	70413651	70415416	protein_coding	Nemf	exon	ENSMUSG00000020982	ProperStrand	77	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.3962
chr7	52632070	52632150	protein_coding	Snrnp70	exon	ENSMUSG00000063511	ProperStrand	61	chr2	130101996	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	4	-16.3126
chr17	56593659	56593702	protein_coding	Ptprs	exon	ENSMUSG00000013236	ProperStrand	152	chr6	71832595	71832685	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-3.8313
chr6	24684480	24684497	protein_coding	Hyal6	exon	ENSMUSG00000029679	NonProperStrand	114	chr10	111423243	111423260	protein_coding	Glipr1	intron	ENSMUSG00000056888	ProperStrand	2	1	-20.8143
chr11	12364876	12364894	protein_coding	Cobl	utr5	ENSMUSG00000020173	NonProperStrand	9	chr8	13466832	13466848	protein_coding	Gas6	exon	ENSMUSG00000031451	ProperStrand	27	1	-18.3327
chr1	89616337	89616364	protein_coding	Inpp5d	utr3	ENSMUSG00000026288	ProperStrand	75	chr9	64024947	64024998	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	1	-8.6947
chr9	78327184	78327274	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr2	40411960	40412040	pseudogene	Gm13456	.	ENSMUSG00000082536	ProperStrand	2	2	-inf
chr4	55431652	55431668	lincRNA	Gm12505	exon	ENSMUSG00000087070	ProperStrand	447	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-1.6312
chr11	101304847	101304871	protein_coding	Rpl27	exon	ENSMUSG00000063316	ProperStrand	96	chr3	88497866	88497980	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-6.5274
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr2	158185576	158185655	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-2.2050
chr4	43505719	43505809	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr5	138824208	138824224	protein_coding	Gm10874	intron	ENSMUSG00000075591	ProperStrand	1	1	-inf
chr15	98683362	98683452	protein_coding	Mll2	exon	ENSMUSG00000048154	ProperStrand	170	chr19	8800399	8800479	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-1.7474
chr7	13516143	13516210	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr4	131908236	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	13	-2.2472
chr5	44113633	44113733	protein_coding	Cc2d2a	exon	ENSMUSG00000039765	ProperStrand	2	chr6	97112810	97112879	snoRNA	ENSMUSG00000065728_SNORA36	.	ENSMUSG00000065728	ProperStrand	158	1	-18.7342
chr4	148000808	148000878	protein_coding	Tardbp	utr5	ENSMUSG00000041459	ProperStrand	120	chrX	84483698	84483719	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	2	-11.0595
chr8	77554366	77554466	protein_coding	Hmgxb4	utr3	ENSMUSG00000034518	ProperStrand	25	chr5	111121066	111121112	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	5	-inf
chr5	121655035	121655135	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	chr4	41158541	41158608	snoRNA	ENSMUSG00000089308_SNORD121A	.	ENSMUSG00000089308	ProperStrand	209	1	-1.6134
chr19	5845347	5845363	non_coding	Neat1	.	ENSMUSG00000092274	ProperStrand	63	chr5	115939535	115939591	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	2	-12.4216
chr11	49115999	49116089	LINE	L1_Mus3	L1	chr11L1_Mus349110384	ProperStrand	1	chr3	23855762	23855852	LINE	L1VL1	L1	chr3L1VL123855036	ProperStrand	1	1	-inf
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr3	137581540	137581614	protein_coding	Lamtor3	utr5	ENSMUSG00000091512	ProperStrand	5	2	-18.3162
chr11	119140244	119140261	protein_coding	Gaa	exon	ENSMUSG00000025579	ProperStrand	149	chr2	86138158	86138174	protein_coding	Olfr1052	exon	ENSMUSG00000047149	NonProperStrand	119	1	-10.1130
chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	chr9	108468903	108468947	protein_coding	Ndufaf3	exon	ENSMUSG00000070283	ProperStrand	2	1	-16.9926
chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	chr6	125112409	125112549	protein_coding	Gapdh	exon	ENSMUSG00000057666	ProperStrand	356	1	-4.2507
chr10	62342405	62342491	protein_coding	Tet1	exon	ENSMUSG00000047146	ProperStrand	286	chr12	106269433	106269533	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-1.4618
chr14	15572352	15572371	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr14	76956323	76956339	protein_coding	Serp2	utr5	ENSMUSG00000052584	NonProperStrand	41	1	-12.0520
chr14	80262508	80262524	lincRNA	Gm6999	intron	ENSMUSG00000075495	ProperStrand	265	chr12	111879133	111879191	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	1	-5.6141
chr11	107236387	107236404	protein_coding	Pitpnc1	intron	ENSMUSG00000040430	NonProperStrand	14	chr17	35089182	35089231	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-8.4048
mmu-miR-6238	1	19	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr19	56796961	56796978	protein_coding	Adrb1	exon	ENSMUSG00000035283	NonProperStrand	8	1	-14.6736
chr17	28882005	28882069	protein_coding	Mapk14	exon	ENSMUSG00000053436	ProperStrand	40	chr16	23111449	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.8604
chr11	11867679	11870432	protein_coding	Grb10	exon	ENSMUSG00000020176	NonProperStrand	159	chr10	79145090	79145146	protein_coding	Cdc34	utr5	ENSMUSG00000020307	ProperStrand	30	1	-12.7600
chr7	73216129	73219225	protein_coding	Snrpa1	exon	ENSMUSG00000030512	ProperStrand	71	chr7	80547651	80547667	protein_coding	Rgma	intron	ENSMUSG00000070509	ProperStrand	46	1	-13.5148
chr7	31251158	31251178	protein_coding	Nphs1	exon	ENSMUSG00000006649	ProperStrand	22	chr4	154999017	154999683	protein_coding	Cdk11b	utr5	ENSMUSG00000029062	ProperStrand	92	9	-inf
chr11	80965641	80965658	protein_coding	Accn1	exon	ENSMUSG00000020704	NonProperStrand	228	chr4	129993737	129993791	protein_coding	Zcchc17	utr3	ENSMUSG00000028772	ProperStrand	8	1	-14.7794
chrX	49471330	49471347	protein_coding	Gpc4	intron	ENSMUSG00000031119	ProperStrand	8	chr4	131908255	131908298	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-5.0428
chr6	78984548	78984586	LTR	LTRIS2	ERV1	chr6LTRIS278984460	ProperStrand	1	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-inf
chr5	74489252	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr11	48615536	48615609	snoRNA	ENSMUSG00000064725_Snord96a	.	ENSMUSG00000064725	ProperStrand	89	2	-8.0208
chr2	90235301	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	34808913	34808930	protein_coding	Tnxb	exon	ENSMUSG00000033327	ProperStrand	36	1	-5.4531
chr1	182099622	182099780	protein_coding	Adck3	exon	ENSMUSG00000026489	ProperStrand	17	chr11	69483178	69483268	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.7874
chr11	70209212	70209867	protein_coding	Pelp1	exon	ENSMUSG00000018921	ProperStrand	64	chr2	26494766	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	3	-7.6498
chr18	24264890	24264909	protein_coding	Ino80c	utr3	ENSMUSG00000047989	ProperStrand	5	chr14	31827494	31827545	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-12.0933
chr2	174595170	174595191	protein_coding	Edn3	intron	ENSMUSG00000027524	ProperStrand	1	chr4	131908320	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-inf
chr6	52165758	52165774	protein_coding	Hoxa7	exon	ENSMUSG00000038236	ProperStrand	28	chr5	108336377	108336460	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-6.3791
chr4	136101981	136101997	protein_coding	Luzp1	utr3	ENSMUSG00000001089	NonProperStrand	47	chr1	102076759	102076790	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	1	-9.9267
chr4	131908383	131908463	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr9	40612830	40612920	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	1	-3.6214
chr15	34203045	34205899	protein_coding	Laptm4b	exon	ENSMUSG00000022257	ProperStrand	24	chr1	155287309	155287354	snoRNA	ENSMUSG00000064435_SNORA4	.	ENSMUSG00000064435	ProperStrand	263	1	-12.2059
chr8	23486696	23486786	protein_coding	Slc25a15	utr3	ENSMUSG00000031482	ProperStrand	13	chr15	98350173	98350253	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-7.8110
chr11	55296195	55296332	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	chr4	3762227	3762285	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	2	-4.5415
chr19	3944290	3947100	protein_coding	Unc93b1	exon	ENSMUSG00000036908	ProperStrand	5	chr8	74058617	74058662	protein_coding	Bst2	exon	ENSMUSG00000046718	ProperStrand	15	1	-20.1544
chr10	79133851	79133881	protein_coding	Gm16517	intron	ENSMUSG00000020308	ProperStrand	43	chr2	26768371	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	3	-14.3763
chr9	78023108	78023148	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr2	32071673	32071748	protein_coding	Prrc2b	exon	ENSMUSG00000039262	ProperStrand	344	1	-2.6101
chr14	31867350	31867368	protein_coding	Pbrm1	exon	ENSMUSG00000042323	ProperStrand	87	chr9	120038466	120038520	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.3917
chr18	35744362	35744487	protein_coding	Matr3	exon	ENSMUSG00000037236	ProperStrand	90	chr4	53873613	53873646	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	2	-13.1157
chr19	6176694	6176784	LINE	L2a	L2	chr19L2a6176547	ProperStrand	1	chr19	6176959	6177049	SINE	ID_B1	B4	chr19ID_B16176925	ProperStrand	1	1	-inf
chr1	155096746	155096846	protein_coding	Lamc1	exon	ENSMUSG00000026478	ProperStrand	239	chr3	153575120	153575169	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	2	-9.3787
chr4	124337280	124337296	protein_coding	Pou3f1	utr3	ENSMUSG00000078236	NonProperStrand	5	chr7	29136525	29136575	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-7.2327
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr7	3220812	3220838	miRNA	Mir295	.	ENSMUSG00000077886	ProperStrand	1	1	-inf
chr15	102329165	102329202	protein_coding	Pcbp2	utr3	ENSMUSG00000056851	ProperStrand	164	chr9	120039540	120039622	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.6260
chr14	55187359	55187407	protein_coding	Jub	utr3	ENSMUSG00000022178	ProperStrand	25	chr4	131908236	131908326	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-10.1622
chr11	62416623	62416649	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	chr11	83107852	83107903	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	1	-1.2688
chr16	87553609	87553626	protein_coding	ORF63	utr5	ENSMUSG00000025610	ProperStrand	7	chr14	10539776	10539797	protein_coding	Fhit	intron	ENSMUSG00000060579	NonProperStrand	51	1	-18.0807
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr1	192712615	192712631	protein_coding	Rps6kc1	exon	ENSMUSG00000089872	ProperStrand	241	1	-3.2611
chr11	88875877	88875967	protein_coding	Trim25	intron	ENSMUSG00000000275	ProperStrand	50	chr5	138741042	138741222	protein_coding	Stag3	exon	ENSMUSG00000036928	ProperStrand	53	1	-13.9299
chr3	96132420	96132515	snRNA	ENSMUSG00000075978_U1	.	ENSMUSG00000075978	ProperStrand	132	chr16	23111770	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-2.7375
chr4	43505656	43505722	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr6	115755682	115758045	protein_coding	Rpl32	exon	ENSMUSG00000057841	ProperStrand	137	2	-3.1139
chr15	102493367	102493439	protein_coding	Atp5g2	utr3	ENSMUSG00000062683	ProperStrand	32	chr10	23505150	23505218	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.1928
chr3	130952831	130974875	protein_coding	Hadh	exon	ENSMUSG00000027984	ProperStrand	35	chr19	8799036	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-6.9008
chrX	12700565	12709233	protein_coding	Usp9x	exon	ENSMUSG00000031010	ProperStrand	174	chr8	73419657	73419758	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	6	-9.7316
chr7	137883364	137884391	protein_coding	Tacc2	exon	ENSMUSG00000030852	ProperStrand	95	chr9	120038507	120038607	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.2445
chr1	157915558	157915577	protein_coding	Tor1aip2	utr3	ENSMUSG00000050565	ProperStrand	31	chr3	108357255	108357308	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	2	-9.5230
chr14	52852221	52852294	protein_coding	Chd8	exon	ENSMUSG00000053754	ProperStrand	167	chr7	29136581	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-0.8681
chr13	9833551	9833653	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr13	36960348	36960365	protein_coding	F13a1	utr3	ENSMUSG00000039109	NonProperStrand	15	5	-inf
chr8	107776154	107776244	protein_coding	D230025D16Rik	utr3	ENSMUSG00000031889	ProperStrand	20	chr19	8799581	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-8.9766
chr11	3879031	3879055	protein_coding	Pes1	utr3	ENSMUSG00000020430	ProperStrand	49	chr11	106362326	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-6.2417
chr13	55176705	55176782	protein_coding	Uimc1	exon	ENSMUSG00000025878	ProperStrand	25	chrX	34622930	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-4.8222
chr8	53422383	53422463	snRNA	ENSMUSG00000064682_U2	.	ENSMUSG00000064682	ProperStrand	55	chr12	17552972	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	4	-16.1981
chr11	51440767	51440795	protein_coding	Rmnd5b	intron	ENSMUSG00000001054	NonProperStrand	2	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-inf
chr1	72301655	72301745	snRNA	ENSMUSG00000093333_AC120136.3	.	ENSMUSG00000093333	ProperStrand	68	chr9	15119631	15119708	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.4150
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr11	69480877	69480907	protein_coding	Eif4a1	utr3	ENSMUSG00000059796	ProperStrand	108	1	-5.2179
chr9	78023109	78023197	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr10	86156177	86156193	protein_coding	Hsp90b1	exon	ENSMUSG00000020048	ProperStrand	396	3	-6.2834
chr3	90016666	90016688	protein_coding	Rps27	intron	ENSMUSG00000090733	ProperStrand	40	chr9	120038467	120038552	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.7827
chr8	97974477	97974567	protein_coding	Csnk2a2	intron	ENSMUSG00000046707	ProperStrand	21	chr3	123210900	123210980	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.9390
chr2	25421638	25421657	protein_coding	Mamdc4	exon	ENSMUSG00000026941	ProperStrand	11	chr10	86221857	86221873	protein_coding	BC030307	exon	ENSMUSG00000044937	ProperStrand	77	1	-16.2914
chr5	108333596	108333641	snoRNA	ENSMUSG00000064453_Snord21	.	ENSMUSG00000064453	ProperStrand	201	chr15	79908938	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	4	-10.8068
chr5	121828827	121828843	protein_coding	Trafd1	exon	ENSMUSG00000042726	ProperStrand	81	chr8	113366330	113366354	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	1	-8.5782
chr1	162966813	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	chr8	32260335	32260439	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	6	-1.3824
chr2	154171683	154171700	protein_coding	Cdk5rap1	exon	ENSMUSG00000027487	ProperStrand	75	chr8	32260338	32260425	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-4.2046
chr3	25780837	25780854	protein_coding	Nlgn1	intron	ENSMUSG00000063887	NonProperStrand	37	chr4	122970392	122970460	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-8.3832
chr4	41239558	41239648	protein_coding	Dcaf12	utr3	ENSMUSG00000028436	ProperStrand	33	chr4	131908814	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.1302
chr9	57253860	57253877	SINE	B1_Mm	Alu	chr9B1_Mm57253847	ProperStrand	39	chr9	15118323	15118375	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-4.2742
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr15	81416843	81416860	protein_coding	Ep300	utr5	ENSMUSG00000055024	NonProperStrand	4	1	-15.0504
chr7	17005599	17005658	protein_coding	Zc3h4	exon	ENSMUSG00000059273	ProperStrand	95	chr7	148634708	148634798	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-3.1398
chr14	70185233	70185267	protein_coding	Rhobtb2	utr3	ENSMUSG00000022075	ProperStrand	22	chr4	59819657	59819674	protein_coding	Snx30	intron	ENSMUSG00000028385	ProperStrand	8	1	-18.6015
chr13	23830717	23830777	protein_coding	Hist1h1c	exon	ENSMUSG00000036181	ProperStrand	99	chr1	39605591	39605682	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	2	-10.2807
chrX	98748061	98748077	protein_coding	Taf1	exon	ENSMUSG00000031314	ProperStrand	61	chr9	120039626	120039644	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.2886
chr4	118951575	118951683	protein_coding	Ybx1	exon	ENSMUSG00000028639	ProperStrand	171	chr1	162965980	162966009	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	7	-13.9260
chr2	90235294	90235345	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	7	-7.9009
chr1	193730797	193730813	protein_coding	Slc30a1	utr5	ENSMUSG00000037434	ProperStrand	42	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.9369
chr12	84937906	84937925	protein_coding	Zfyve1	intron	ENSMUSG00000042628	NonProperStrand	4	chr7	116663633	116663712	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-7.9103
chr4	16926010	16926027	LINE	Lx7	L1	chr4Lx716925846	NonProperStrand	1	chr17	24856728	24856801	protein_coding	Rps2	intron	ENSMUSG00000044533	ProperStrand	373	1	-inf
chr5	74489299	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr18	67841188	67841218	protein_coding	Ptpn2	exon	ENSMUSG00000024539	ProperStrand	35	3	-15.2737
chr5	122781458	122781523	protein_coding	Rad9b	intron	ENSMUSG00000038569	ProperStrand	7	chr9	120038000	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	5	-19.3182
chr14	55130059	55130201	protein_coding	Prmt5	exon	ENSMUSG00000023110	ProperStrand	72	chr1	162967507	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-5.4063
chr8	58161639	58161729	LINE	L1Md_T	L1	chr8L1Md_T58159899	NonProperStrand	1	chr7	54442903	54442984	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	1	-inf
chr13	113869363	113869380	protein_coding	Cdc20b	intron	ENSMUSG00000078926	NonProperStrand	16	chr18	73693167	73693186	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-8.1701
chr14	47939723	47939745	protein_coding	Mapk1ip1l	utr3	ENSMUSG00000021840	ProperStrand	34	chrX	71517865	71517961	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-7.6787
chr2	66444100	66444121	protein_coding	Scn9a	intron	ENSMUSG00000075316	ProperStrand	58	chr3	123210881	123210971	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.1217
chr9	5695278	5695368	LINE	L1_Mus3	L1	chr9L1_Mus35695247	ProperStrand	1	chr9	5694981	5695071	SINE	MIRb	MIR	chr9MIRb5694948	ProperStrand	1	1	-inf
chr14	124243064	124243085	protein_coding	Itgbl1	exon	ENSMUSG00000032925	ProperStrand	159	chr16	98143882	98143932	protein_coding	C2cd2	utr5	ENSMUSG00000045975	ProperStrand	9	1	-15.2417
chr2	32818840	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	chr10	23505550	23505620	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	5	-4.8169
chr5	53207468	53209854	protein_coding	Zcchc4	exon	ENSMUSG00000029179	ProperStrand	15	chr9	15119665	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.2385
chr5	73346725	73348606	protein_coding	Slain2	exon	ENSMUSG00000036087	ProperStrand	15	chr4	131865856	131865946	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.2332
chr5	116035857	116037813	protein_coding	Gcn1l1	exon	ENSMUSG00000041638	ProperStrand	408	chr10	110918636	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-1.2264
chr1	84931463	84931543	protein_coding	Slc16a14	utr5	ENSMUSG00000026220	ProperStrand	4	chr4	131865888	131865978	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-11.7931
chr11	77308487	77308537	protein_coding	Git1	intron	ENSMUSG00000011877	ProperStrand	95	chr7	117190022	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.5188
chr5	22987137	22988229	protein_coding	Mll5	exon	ENSMUSG00000029004	ProperStrand	21	chr15	98356835	98356902	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	1	-9.8725
chr5	115795864	115795910	protein_coding	Cox6a1	exon	ENSMUSG00000041697	ProperStrand	38	chr9	103401280	103401296	protein_coding	Tmem108	exon	ENSMUSG00000042757	NonProperStrand	323	1	-10.8615
chr5	125894225	125894247	protein_coding	Dhx37	utr3	ENSMUSG00000029480	ProperStrand	15	chr1	136457066	136481733	protein_coding	Kdm5b	utr5	ENSMUSG00000042207	NonProperStrand	3	1	-inf
chr18	34380824	34380852	protein_coding	Apc	exon	ENSMUSG00000005871	ProperStrand	64	chr12	84040062	84040078	protein_coding	Rgs6	intron	ENSMUSG00000021219	NonProperStrand	65	1	-13.0228
chrX	6953479	6953497	lincRNA	Gm14379	intron	ENSMUSG00000087252	ProperStrand	1	chr11	69481420	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-inf
chr19	45633278	45633368	protein_coding	Poll	exon	ENSMUSG00000025218	ProperStrand	2	chr11	51551345	51551425	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	1	-15.1659
chr6	115758724	115758761	protein_coding	Rpl32	utr5	ENSMUSG00000057841	ProperStrand	137	chr11	97643006	97643077	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-3.6743
chr3	155026197	155026287	LINE	L1_Mus2	L1	chr3L1_Mus2155026173	NonProperStrand	1	chr3	155026083	155026163	LTR	ORR1C1	MaLR	chr3ORR1C1155025903	ProperStrand	1	1	-inf
chr15	81540960	81541960	protein_coding	Rangap1	exon	ENSMUSG00000022391	ProperStrand	69	chr19	8963023	8963113	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.0449
chr10	77497487	77497541	protein_coding-noncoding	Aire	utr3	ENSMUSG00000000731	ProperStrand	5	chr6	52589336	52589365	protein_coding	Hibadh	intron	ENSMUSG00000029776	ProperStrand	33	2	-18.6730
chr3	137849424	137849440	protein_coding	4930579F01Rik	utr5	ENSMUSG00000012042	NonProperStrand	156	chr11	104191234	104191270	protein_coding	Mapt	utr3	ENSMUSG00000018411	ProperStrand	8	1	-15.5145
chr5	42831076	42831166	LTR	MTA_Mm-int	MaLR	chr5MTA_Mm-int42830407	NonProperStrand	1	chr19	46256543	46256623	protein_coding	Gbf1	intron	ENSMUSG00000025224	ProperStrand	50	1	-inf
chr2	164226383	164226400	protein_coding	Matn4	exon	ENSMUSG00000016995	ProperStrand	15	chr13	49008366	49008451	protein_coding	Fam120a	exon	ENSMUSG00000038014	ProperStrand	76	1	-15.6650
chr8	122466497	122466597	protein_coding	Usp10	intron	ENSMUSG00000031826	ProperStrand	98	chr11	97642952	97642976	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.6774
chr8	82214266	82217331	protein_coding	Abce1	exon	ENSMUSG00000058355	ProperStrand	66	chr4	149618182	149618405	protein_coding	Eno1	exon	ENSMUSG00000063524	ProperStrand	432	13	-19.3059
chr2	4912412	4912500	protein_coding	Mcm10	utr3	ENSMUSG00000026669	ProperStrand	21	chr4	131865464	131865496	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	2	-9.8774
chr14	124353869	124353886	protein_coding	Itgbl1	exon	ENSMUSG00000032925	ProperStrand	159	chr6	71832550	71832573	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-3.7477
chr7	4397160	4397208	protein_coding	Rdh13	utr5	ENSMUSG00000008435	ProperStrand	5	chr1	162286088	162286104	protein_coding	Rabgap1l	intron	ENSMUSG00000026721	ProperStrand	44	1	-18.5685
chr15	35226708	35226726	protein_coding	Osr2	intron	ENSMUSG00000022330	NonProperStrand	1	chr10	90581049	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-inf
chr18	74785354	74786835	protein_coding	Myo5b	exon	ENSMUSG00000025885	ProperStrand	28	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-9.2727
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chrX	160347488	160347504	protein_coding	Ap1s2	intron	ENSMUSG00000031367	ProperStrand	52	1	-8.0814
chr9	113850832	113850869	protein_coding	Ubp1	intron	ENSMUSG00000009741	ProperStrand	29	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-9.6433
chr8	96912603	96912683	protein_coding	Herpud1	intron	ENSMUSG00000031770	ProperStrand	10	chr5	74489585	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-7.3223
chr1	133687011	133687101	LTR	MYSERV6-int	ERVK	chr1MYSERV6-int133685899	NonProperStrand	1	chr1	133687256	133687336	LTR	MYSERV6-int	ERVK	chr1MYSERV6-int133687248	NonProperStrand	1	1	-inf
chr2	25416958	25416994	protein_coding	Edf1	intron	ENSMUSG00000015092	ProperStrand	22	chr18	62173039	62173058	protein_coding	Sh3tc2	intron	ENSMUSG00000045629	ProperStrand	471	1	-11.2180
chr16	57391762	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr11	117829119	117829219	protein_coding	Socs3	exon	ENSMUSG00000053113	ProperStrand	137	1	-6.1572
chr16	17646861	17647701	protein_coding	Ccdc74a	exon	ENSMUSG00000041617	ProperStrand	2	chr19	8963027	8963083	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-9.4105
chr18	34789104	34789173	protein_coding	Kif20a	exon	ENSMUSG00000003779	ProperStrand	50	chr5	37323839	37323859	protein_coding	Ppp2r2c	intron	ENSMUSG00000029120	NonProperStrand	6	1	-18.2322
chr16	57391758	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr8	73419657	73419757	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	6	-1.2936
chr17	33114748	33114764	protein_coding	Zfp472	exon	ENSMUSG00000053600	NonProperStrand	8	chr2	158185554	158185666	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	5	-18.9057
chr18	71864305	71864321	protein_coding	Dcc	intron	ENSMUSG00000060534	ProperStrand	12	chr18	33954819	33954874	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-6.6526
chr8	82200411	82200546	protein_coding	Otud4	utr3	ENSMUSG00000036990	ProperStrand	45	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.8631
chr14	51571155	51571210	protein_coding	Pnp	exon	ENSMUSG00000021871	ProperStrand	6	chr18	60937530	60938088	protein_coding	Rps14	exon	ENSMUSG00000024608	ProperStrand	154	1	-16.1428
chrX	19683228	19683244	protein_coding	Slc9a7	exon	ENSMUSG00000037341	NonProperStrand	136	chr11	6428092	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.8050
mmu-miR-6240	3	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr1	178722364	178722453	protein_coding	Cep170	intron	ENSMUSG00000057335	ProperStrand	21	1	-8.0023
chr13	9833564	9833663	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr11	101323729	101323791	protein_coding	Vat1	exon	ENSMUSG00000034993	ProperStrand	69	1	-4.6850
chr4	130491700	130491772	protein_coding	Laptm5	utr3	ENSMUSG00000028581	ProperStrand	34	chr8	73419657	73419757	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.1854
chr1	44175576	44175593	protein_coding	Kdelc1	utr5	ENSMUSG00000026047	ProperStrand	22	chr8	73115775	73115791	protein_coding	Ell	utr3	ENSMUSG00000070002	NonProperStrand	134	1	-13.7341
chr11	96822848	96822948	protein_coding	Sp2	exon	ENSMUSG00000018678	ProperStrand	11	chr18	35102297	35102332	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-10.0321
chr5	151343452	151343469	protein_coding	Brca2	exon	ENSMUSG00000041147	ProperStrand	75	chr1	162967518	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-3.0693
chr2	120281993	120282010	protein_coding	Ganc	intron	ENSMUSG00000062646	NonProperStrand	3	chr5	130295414	130295500	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	2	-19.3282
chr9	99162984	99163269	protein_coding	Cep70	exon	ENSMUSG00000056267	ProperStrand	16	chr1	162965981	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	9	-21.4004
chr14	45949538	45949554	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	chr19	43924498	43924546	protein_coding	Dnmbp	exon	ENSMUSG00000025195	ProperStrand	15	1	-12.7427
chr10	14375624	14380944	protein_coding	Vta1	exon	ENSMUSG00000019868	ProperStrand	12	chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-9.7127
chr5	100855902	100855973	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr2	89368462	89368479	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	2	-6.3922
chr9	69211977	69212054	protein_coding	Rora	exon	ENSMUSG00000032238	ProperStrand	25	chr8	98269961	98270051	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-7.2809
chr1	174210708	174210725	protein_coding	Igsf8	intron	ENSMUSG00000038034	ProperStrand	25	chr17	13112472	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-6.2962
chr19	37071082	37072101	protein_coding	Btaf1	exon	ENSMUSG00000040565	ProperStrand	23	chr7	148634747	148634781	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-9.5707
chr1	88426904	88426957	protein_coding	Ptma	utr3	ENSMUSG00000026238	ProperStrand	385	chr3	89750435	89750451	protein_coding	Atp8b2	exon	ENSMUSG00000060671	ProperStrand	140	2	-12.6035
chr9	110496943	110497033	protein_coding	Setd2	exon	ENSMUSG00000044791	ProperStrand	51	chr9	120037971	120038051	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	10	-inf
chr13	100899247	100899264	protein_coding	Smn1	intron	ENSMUSG00000021645	ProperStrand	22	chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-8.4663
chr15	88993128	88993228	protein_coding	Plxnb2	exon	ENSMUSG00000036606	ProperStrand	119	chr2	41199972	41199989	protein_coding	Lrp1b	exon	ENSMUSG00000049252	ProperStrand	376	1	-8.2667
chr3	116298267	116298284	protein_coding	Sass6	intron	ENSMUSG00000027959	ProperStrand	10	chr1	36211958	36211998	protein_coding	Uggt1	exon	ENSMUSG00000037470	ProperStrand	67	1	-16.7310
chr6	4940091	4940107	protein_coding	Ppp1r9a	intron	ENSMUSG00000032827	ProperStrand	50	chr17	47819139	47819279	protein_coding	Usp49	utr3	ENSMUSG00000090115	ProperStrand	8	1	-17.5475
chr6	144967725	144967756	protein_coding	Bcat1	exon	ENSMUSG00000030268	ProperStrand	49	chrX	34622947	34623037	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	7	-inf
chr4	131865358	131865458	lincRNA	Snhg12	intron	ENSMUSG00000086290	ProperStrand	178	chr1	162965548	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.4707
chr14	70121082	70121162	protein_coding	Chmp7	exon	ENSMUSG00000034190	ProperStrand	6	chr11	68886941	68887031	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-8.8009
chr3	30517057	30517121	protein_coding	Mynn	utr3	ENSMUSG00000037730	ProperStrand	9	chr19	8799831	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	5	-19.6179
chr2	91613185	91613203	protein_coding	Ambra1	exon	ENSMUSG00000040506	ProperStrand	65	chr14	33005038	33005063	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-3.8435
chr15	94532070	94532088	protein_coding	Tmem117	intron	ENSMUSG00000063296	NonProperStrand	31	chr18	73693171	73693187	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-6.8310
chr4	150139799	150139889	SINE	B4A	B4	chr4B4A150139697	ProperStrand	1	chr4	150139444	150139534	Simple_repeat	(TG)n	Simple_repeat	chr4(TG)n150139303	NonProperStrand	1	1	-inf
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	75473198	75473215	protein_coding	Gsx2	utr3	ENSMUSG00000035946	ProperStrand	307	1	-1.6084
chr16	84188991	84189082	LINE	L1MEg	L1	chr16L1MEg84188916	ProperStrand	1	chr16	84188703	84188793	SINE	B3A	B2	chr16B3A84188706	ProperStrand	1	1	-inf
chr2	84910203	84910246	protein_coding	Tnks1bp1	exon	ENSMUSG00000033955	ProperStrand	23	chr10	127800479	127800495	protein_coding	Coq10a	utr3	ENSMUSG00000039914	NonProperStrand	15	1	-17.8830
chr8	55829837	55829927	LINE	L1Md_F2	L1	chr8L1Md_F255829079	NonProperStrand	1	chr8	55830085	55830175	LTR	MTC	MaLR	chr8MTC55830000	NonProperStrand	1	1	-inf
chr7	104464290	104464310	antisense	Usp35	.	ENSMUSG00000035713	ProperStrand	7	chr1	74974267	74974283	protein_coding	Ccdc108	exon	ENSMUSG00000047021	ProperStrand	10	1	-19.7613
chr7	117964866	117968737	protein_coding	Rnf141	exon	ENSMUSG00000030788	ProperStrand	6	chr11	6428035	6428143	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-12.7157
chr10	119548087	119548126	protein_coding	Helb	exon	ENSMUSG00000020228	ProperStrand	41	chr17	39985355	39985376	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-6.6858
chr17	8720218	8720234	protein_coding	Pde10a	intron	ENSMUSG00000023868	ProperStrand	25	chr6	113419923	113419940	protein_coding	Il17re	exon	ENSMUSG00000043088	NonProperStrand	12	1	-18.4657
chr8	125986398	125986425	protein_coding	Def8	utr3	ENSMUSG00000001482	ProperStrand	19	chr2	158182156	158182194	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-7.2845
chr19	59064715	59064732	protein_coding	4930506M07Rik	exon	ENSMUSG00000041362	ProperStrand	36	chr9	120039585	120039675	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-4.2735
chr5	122922960	122922986	protein_coding	Atp2a2	intron	ENSMUSG00000029467	ProperStrand	166	chr7	50072533	50072581	protein_coding	Gm2381	utr3	ENSMUSG00000092225	ProperStrand	9	1	-15.1703
chr15	78266083	78267376	protein_coding	Kctd17	exon	ENSMUSG00000033287	ProperStrand	6	chr3	123210854	123210872	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-10.7622
chr1	37898095	37898111	protein_coding	Tsga10	exon	ENSMUSG00000060771	ProperStrand	79	chr4	131908236	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.0451
chr18	57400307	57400325	protein_coding	Megf10	exon	ENSMUSG00000024593	ProperStrand	143	chr5	108336363	108336408	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-3.2515
chr6	108351445	108351472	protein_coding	Itpr1	exon	ENSMUSG00000030102	ProperStrand	94	chr4	131908688	131908892	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-1.4264
chr17	25398886	25398986	protein_coding	Ube2i	utr3	ENSMUSG00000015120	ProperStrand	20	chr5	73701635	73701652	protein_coding	Ociad1	exon	ENSMUSG00000029152	ProperStrand	51	1	-15.8788
chr11	3029806	3029839	pseudogene	Pisd-ps1	.	ENSMUSG00000082286	ProperStrand	14	chr11	62416588	62416614	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-8.0774
chr8	42110721	42110742	protein_coding	Mtus1	intron	ENSMUSG00000045636	ProperStrand	12	chr6	124665423	124665523	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	1	-10.1989
chr7	128082708	128082747	protein_coding	Polr3e	exon	ENSMUSG00000030880	ProperStrand	43	chr3	123210855	123210941	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-6.9097
chr12	41464082	41464099	protein_coding	Dock4	exon	ENSMUSG00000035954	ProperStrand	41	chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	1	-10.2557
chr15	58577335	58577351	protein_coding	Fer1l6	intron	ENSMUSG00000037106	ProperStrand	54	chr1	89681328	89681396	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-5.6471
chr14	34907593	34907918	protein_coding	Anxa8	exon	ENSMUSG00000021950	ProperStrand	26	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-10.2806
chr9	120483437	120483536	protein_coding	Rpl14	exon	ENSMUSG00000025794	ProperStrand	123	chr7	52381743	52381759	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	4	-18.6695
chr14	55270599	55270680	protein_coding	Acin1	exon	ENSMUSG00000022185	ProperStrand	67	chr1	162965981	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-3.4002
chr16	31221221	31221240	LTR	MMERVK10C-int	ERVK	chr16MMERVK10C-int31219685	NonProperStrand	1	chr8	13416896	13416912	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-inf
chr2	75500597	75500742	protein_coding	Hnrnpa3	exon	ENSMUSG00000059005	ProperStrand	289	chr9	15118244	15118321	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-0.9614
chr2	126958712	126958802	protein_coding	Ncaph	intron	ENSMUSG00000034906	ProperStrand	43	chr11	69481337	69481417	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.8146
chr16	23111372	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	chr1	162967115	162967178	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	11	-0.9641
chr9	63868722	63868739	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-2.1864
chr11	4970081	4970106	protein_coding	Ewsr1	exon	ENSMUSG00000009079	ProperStrand	248	chr6	83318070	83318086	protein_coding	Tet3	exon	ENSMUSG00000034832	NonProperStrand	93	1	-9.5884
chr8	69228390	69228406	protein_coding	Npy1r	exon	ENSMUSG00000036437	ProperStrand	13	chr4	131908809	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.8088
chr9	20602907	20603040	protein_coding	Col5a3	exon	ENSMUSG00000004098	ProperStrand	47	chr12	88778662	88778752	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-6.9827
chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr17	24857716	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	18	-1.1429
chr6	125399469	125399486	Simple_repeat	(TCTCC)n	Simple_repeat	chr6(TCTCC)n125399468	NonProperStrand	16	chr18	35716685	35716743	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.5854
chr16	8710228	8712134	protein_coding	Usp7	exon	ENSMUSG00000022710	ProperStrand	118	chr4	131865428	131865463	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-2.7707
chr4	137166669	137166717	protein_coding	Usp48	exon	ENSMUSG00000043411	ProperStrand	135	chr18	33954844	33954944	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	4	-7.8511
chr3	104454818	104454836	protein_coding	Slc16a1	exon	ENSMUSG00000032902	ProperStrand	48	chr18	35714145	35714235	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-3.8569
chr16	75761550	75765200	protein_coding	Hspa13	exon	ENSMUSG00000032932	NonProperStrand	57	chr2	158182156	158182186	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-5.1019
chr7	3656248	3656338	protein_coding	Rps9	exon	ENSMUSG00000006333	ProperStrand	87	chr7	116663647	116663727	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	4	-7.3388
chr11	6428035	6428089	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr5	23358027	23358098	snoRNA	ENSMUSG00000093321_Snord93	.	ENSMUSG00000093321	ProperStrand	218	1	-1.1266
chr13	14729918	14729936	protein_coding	AW209491	exon	ENSMUSG00000039182	ProperStrand	4	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.0048
chr12	85350481	85350499	protein_coding	Acot1	utr5	ENSMUSG00000072949	ProperStrand	72	chr9	15119657	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.3186
chr7	133643677	133643756	protein_coding	Atxn2l	exon	ENSMUSG00000032637	ProperStrand	219	chr15	98782078	98783909	protein_coding	Tuba1a	exon	ENSMUSG00000072235	ProperStrand	17	1	-13.2808
chr11	49935805	49935822	SINE	B1_Mus2	Alu	chr11B1_Mus249935677	ProperStrand	1	chr9	120038611	120038666	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-inf
chr4	117889747	117893099	protein_coding	Ptprf	exon	ENSMUSG00000033295	ProperStrand	337	chr3	46250662	46250678	protein_coding	Pabpc4l	exon	ENSMUSG00000090919	ProperStrand	137	2	-13.0665
chr4	46307004	46307094	LTR	RMER15	ERVL	chr4RMER1546306931	ProperStrand	1	chr4	46306798	46306878	SINE	B4A	B4	chr4B4A46306740	NonProperStrand	1	1	-inf
chr11	7067186	7069426	protein_coding	Adcy1	exon	ENSMUSG00000020431	ProperStrand	183	chr4	98213483	98213505	protein_coding	Inadl	utr5	ENSMUSG00000061859	ProperStrand	21	1	-13.2026
chr15	88543126	88543216	protein_coding	Brd1	exon	ENSMUSG00000022387	ProperStrand	70	chr4	115826770	115827172	protein_coding	Pomgnt1	exon	ENSMUSG00000028700	ProperStrand	6	1	-17.7181
chr3	94167315	94167331	protein_coding	C2cd4d	utr5	ENSMUSG00000091648	ProperStrand	30	chr16	23111372	23111492	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.3326
chr4	43943351	43943367	protein_coding	Reck	intron	ENSMUSG00000028476	NonProperStrand	36	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-12.7182
chr15	11813059	11813076	protein_coding	Npr3	exon	ENSMUSG00000022206	ProperStrand	6	chr19	8963045	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-6.7266
chr9	43047660	43047678	protein_coding	Oaf	utr5	ENSMUSG00000032014	NonProperStrand	11	chr11	62416607	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-8.5772
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr9	64024930	64024952	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	1	-3.0441
chr4	107728076	107728121	protein_coding	Scp2	exon	ENSMUSG00000028603	ProperStrand	23	chr11	62416598	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-7.0660
chr17	44412956	44412973	protein_coding	Clic5	utr3	ENSMUSG00000023959	NonProperStrand	2	chr4	131908357	131908455	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-8.3123
chr10	126924836	126924891	protein_coding	R3hdm2	exon	ENSMUSG00000025404	ProperStrand	33	chr9	103401280	103401296	protein_coding	Tmem108	exon	ENSMUSG00000042757	NonProperStrand	323	1	-11.1470
chr2	179994297	179994313	protein_coding	Cables2	utr3	ENSMUSG00000038990	NonProperStrand	1	chr9	15119635	15119725	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-inf
chr11	120668643	120668691	protein_coding	Fasn	utr3	ENSMUSG00000025153	ProperStrand	298	chr3	135523711	135523728	protein_coding	Slc39a8	intron	ENSMUSG00000053897	NonProperStrand	19	1	-12.4347
chr13	21622836	21622926	protein_coding	Zfp192	utr5	ENSMUSG00000063894	ProperStrand	12	chr10	23505200	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	6	-inf
chr6	18271880	18271898	protein_coding	Cftr	utr3	ENSMUSG00000041301	ProperStrand	1	chr18	35714221	35714283	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-inf
chr11	117740132	117740151	antisense	Gm11725	.	ENSMUSG00000085434	NonProperStrand	17	chr5	121655016	121655129	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-6.2021
chr1	162138577	162138652	protein_coding	Cacybp	exon	ENSMUSG00000014226	ProperStrand	39	chr2	26768071	26768120	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	5	-18.9795
chr5	130338545	130338633	protein_coding	Sumf2	utr3	ENSMUSG00000025538	ProperStrand	20	chr19	8800361	8800451	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-5.6450
chr2	124914589	124914685	protein_coding	Myef2	utr3	ENSMUSG00000027201	ProperStrand	19	chr4	131908689	131908722	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-5.3903
chr4	131908686	131908814	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	chr2	37255576	37255660	snoRNA	ENSMUSG00000077756_Snord90	.	ENSMUSG00000077756	ProperStrand	167	12	-11.2952
chr17	36305016	36305034	protein_coding	Gm8909	exon	ENSMUSG00000073402	ProperStrand	1	chr18	35716762	35716786	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-inf
chr11	30000521	30000621	protein_coding	Spnb2	exon	ENSMUSG00000020315	ProperStrand	103	chr1	162965979	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	5	-12.0301
chr15	88994962	88995764	protein_coding	Plxnb2	exon	ENSMUSG00000036606	ProperStrand	119	chr16	23111373	23111474	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-2.8243
chr5	87237836	87237873	protein_coding	Ythdc1	intron	ENSMUSG00000035851	ProperStrand	45	chr16	23111452	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-3.1133
chr2	90235296	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	121658912	121658940	protein_coding	Rpl6	exon	ENSMUSG00000029614	ProperStrand	332	1	-1.4930
chr2	153050783	153050799	protein_coding	Tspyl3	exon	ENSMUSG00000074671	ProperStrand	228	chr12	17552949	17553087	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	2	-4.5806
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr2	26768383	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-0.8540
chr5	130297372	130297393	protein_coding	Cct6a	exon	ENSMUSG00000029447	ProperStrand	128	chr19	5666668	5666684	protein_coding	Pcnxl3	exon	ENSMUSG00000054874	ProperStrand	96	1	-10.8475
chr2	26780555	26780596	protein_coding	Surf4	intron	ENSMUSG00000014867	ProperStrand	16	chr13	113342177	113342193	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	1	-11.4452
chr1	91955968	91955993	protein_coding	Iqca	intron	ENSMUSG00000026301	ProperStrand	13	chr4	131908689	131908789	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-6.5299
chr4	129192702	129192775	protein_coding	Marcksl1	utr3	ENSMUSG00000047945	ProperStrand	52	chr1	162966813	162966830	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	3	-14.9260
chr5	123216134	123216204	protein_coding	Camkk2	intron	ENSMUSG00000029471	ProperStrand	35	chr16	23110539	23110584	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.4208
chrX	7476331	7476348	protein_coding	Pqbp1	utr5	ENSMUSG00000031157	ProperStrand	22	chr18	35716831	35716857	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.9687
chr2	57873768	57873785	protein_coding	Galnt5	intron	ENSMUSG00000026828	NonProperStrand	9	chr5	125889881	125889906	tRNA	tRNA702-AlaTGC	.	1844307	ProperStrand	10	1	-19.2734
chr15	72935335	72935415	protein_coding	Eif2c2	utr3	ENSMUSG00000036698	ProperStrand	154	chrX	71517861	71517951	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-4.7070
chr4	154545329	154545429	protein_coding	Ski	intron	ENSMUSG00000029050	ProperStrand	28	chr18	73693162	73693186	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-7.0351
chr12	88488443	88496424	protein_coding	Pomt2	exon	ENSMUSG00000034126	NonProperStrand	331	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-2.1008
chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	chr1	162966812	162966836	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-1.5843
chr2	179913018	179913061	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr6	71832550	71832641	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-2.2786
chr2	157115283	157116276	protein_coding	Rpn2	exon	ENSMUSG00000027642	ProperStrand	363	chr5	147646719	147646786	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	1	-4.4340
chr9	4299367	4302483	protein_coding	Aasdhppt	exon	ENSMUSG00000025894	ProperStrand	121	chr5	115956700	115956721	protein_coding	Pxn	utr5	ENSMUSG00000029528	NonProperStrand	3	1	-18.1428
chr8	73814191	73814291	protein_coding	Myo9b	utr5	ENSMUSG00000004677	ProperStrand	78	chr8	98270016	98270076	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-5.0311
chr7	148594546	148594601	protein_coding	Pddc1	utr3	ENSMUSG00000051007	ProperStrand	10	chr16	23110971	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.7978
chr16	33430319	33430340	protein_coding	Zfp148	intron	ENSMUSG00000022811	NonProperStrand	15	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.9503
chr2	45169093	45169109	LINE	Lx7	L1	chr2Lx745168968	NonProperStrand	4	chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	1	-14.3906
chr15	75294302	75294320	LTR	MTEa	MaLR	chr15MTEa75294115	ProperStrand	2	chr2	26767027	26767059	protein_coding	Rpl7a	exon	ENSMUSG00000062647	ProperStrand	234	1	-18.5196
chr7	16239531	16239611	LINE	L1Md_T	L1	chr7L1Md_T16239539	ProperStrand	1	chr1	12658210	12658300	lincRNA	Gm17644	exon	ENSMUSG00000066918	NonProperStrand	37	1	-inf
chr11	70207315	70207397	protein_coding	Pelp1	exon	ENSMUSG00000018921	ProperStrand	64	chr10	40599918	40599934	protein_coding	Cdc40	intron	ENSMUSG00000038446	ProperStrand	34	1	-14.3264
chr18	45017935	45019639	protein_coding	Ythdc2	exon	ENSMUSG00000034653	ProperStrand	9	chr18	21286076	21286100	protein_coding	Fam59a	utr3	ENSMUSG00000042680	ProperStrand	9	1	-19.9880
chr5	129498033	129498050	protein_coding	Stx2	intron	ENSMUSG00000029428	ProperStrand	3	chr4	131865855	131865914	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.6896
chr17	34249621	34249868	protein_coding	Brd2	exon	ENSMUSG00000024335	NonProperStrand	3	chr9	121380317	121380378	protein_coding	Trak1	intron	ENSMUSG00000032536	NonProperStrand	19	1	-inf
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr14	22441208	22441246	protein_coding	Myst4	exon	ENSMUSG00000021767	ProperStrand	151	1	-3.2222
chr4	131908356	131908409	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	chr7	88674831	88674870	snoRNA	ENSMUSG00000093107_AC167122.1	.	ENSMUSG00000093107	ProperStrand	110	3	-2.3519
chr9	15118245	15118322	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	chr17	26360447	26360537	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	1	-0.8811
chr7	3319936	3319952	protein_coding	Prkcc	exon	ENSMUSG00000078816	NonProperStrand	2	chr15	79908961	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-12.8905
chr7	134656114	134656130	protein_coding	Srcap	intron	ENSMUSG00000053877	ProperStrand	69	chr11	68886936	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	3	-9.4966
chr6	12046263	12046353	LTR	ORR1D1	MaLR	chr6ORR1D112046239	NonProperStrand	1	chr12	81973650	81973730	protein_coding	4933426M11Rik	intron	ENSMUSG00000021133	NonProperStrand	1	1	-inf
chr17	56456523	56457457	protein_coding	Uhrf1	exon	ENSMUSG00000001228	ProperStrand	229	chr11	3426352	3426368	protein_coding	Smtn	exon	ENSMUSG00000020439	ProperStrand	222	1	-8.0112
chr18	21007107	21018974	protein_coding	Trappc8	exon	ENSMUSG00000033382	ProperStrand	43	chr5	130300458	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-5.3477
chr2	165949906	165949998	protein_coding	Sulf2	intron	ENSMUSG00000006800	ProperStrand	171	chr9	15118323	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-1.6856
chr15	12091906	12091961	protein_coding	Zfr	exon	ENSMUSG00000022201	ProperStrand	48	chr16	23111437	23111505	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	5	-8.5650
chr2	84670019	84670054	protein_coding	Timm10	exon	ENSMUSG00000027076	ProperStrand	4	chr10	110918599	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	4	-inf
chr17	30916115	30916745	protein_coding	Dnahc8	exon	ENSMUSG00000033826	ProperStrand	246	chr7	116664797	116664887	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-1.2237
chr4	30707892	30707982	lincRNA	4930556G01Rik	intron	ENSMUSG00000085522	ProperStrand	1	chr10	77706932	77706950	protein_coding	Trappc10	intron	ENSMUSG00000000374	NonProperStrand	8	1	-inf
chr12	112779148	112779238	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	chr16	43886792	43886929	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	2	-1.2358
chr10	95507881	95507981	protein_coding	Eea1	utr3	ENSMUSG00000036499	ProperStrand	82	chr1	162965981	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-3.0349
chr1	83962503	83962583	LINE	L1_Mus2	L1	chr1L1_Mus283962089	ProperStrand	1	chrX	146638606	146638696	LINE	L1Md_F2	L1	chrXL1Md_F2146638181	ProperStrand	1	1	-inf
chr17	56207340	56207432	protein_coding	Ubxn6	utr3	ENSMUSG00000019578	NonProperStrand	32	chr16	57391758	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	1	-9.0562
chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	chr1	84748474	84748506	protein_coding	Trip12	exon	ENSMUSG00000026219	ProperStrand	248	1	-6.6205
chr10	119654645	119659068	protein_coding	Tmbim4	exon	ENSMUSG00000020225	ProperStrand	11	chr16	23111431	23111508	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	5	-18.1078
chr2	26775772	26775824	protein_coding	Surf4	utr3	ENSMUSG00000014867	ProperStrand	16	chr4	131908356	131908444	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.6705
chr6	40285157	40285176	protein_coding	Agk	intron	ENSMUSG00000029916	ProperStrand	6	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-13.3499
chr11	109298626	109298660	protein_coding	Amz2	utr3	ENSMUSG00000020610	ProperStrand	7	chr18	35716834	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-6.2708
chr7	134351010	134351059	protein_coding	Tbc1d10b	exon	ENSMUSG00000042492	ProperStrand	187	chr11	68887042	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	2	-3.7983
chr13	113295765	113295805	protein_coding	Il6st	utr3	ENSMUSG00000021756	ProperStrand	34	chr7	116664812	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.5681
chr2	145798935	145798955	protein_coding	4930529M08Rik	intron	ENSMUSG00000037143	NonProperStrand	10	chr11	77995208	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-9.8181
chr14	56281386	56281403	protein_coding	Nedd8	exon	ENSMUSG00000010376	ProperStrand	27	chr9	72862373	72862424	protein_coding	Pigb	utr3	ENSMUSG00000032203	ProperStrand	2	1	-inf
chr17	35972482	35972572	protein_coding	Tubb5	exon	ENSMUSG00000001525	ProperStrand	624	chr19	18792213	18792293	protein_coding	D030056L22Rik	utr3	ENSMUSG00000047044	ProperStrand	5	1	-13.7907
chr2	35949553	35949570	protein_coding	Lhx6	intron	ENSMUSG00000026890	NonProperStrand	17	chr10	110918549	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-5.8838
chr7	29081524	29083585	protein_coding	Dll3	exon	ENSMUSG00000003436	ProperStrand	2	chr10	62417028	62418069	protein_coding	Dna2	exon	ENSMUSG00000036875	ProperStrand	35	1	-inf
chr4	131481155	131530665	protein_coding	Epb4.1	exon	ENSMUSG00000028906	ProperStrand	23	chr11	97642952	97643037	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	5	-17.4870
chr8	82208231	82208340	protein_coding	Abce1	utr3	ENSMUSG00000058355	ProperStrand	66	chr1	39605591	39605613	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-7.1541
chr8	125927562	125927594	protein_coding	Tcf25	utr3	ENSMUSG00000001472	ProperStrand	66	chr16	84972883	84972899	protein_coding	App	intron	ENSMUSG00000022892	NonProperStrand	101	1	-12.0755
chr10	21015889	21015905	protein_coding	Hbs1l	utr5	ENSMUSG00000019977	ProperStrand	27	chr4	131908809	131908871	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.4692
chr6	83004108	83004140	protein_coding	Htra2	exon	ENSMUSG00000068329	ProperStrand	17	chr2	144087329	144087451	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-9.0854
chr2	59797963	59798053	protein_coding	Baz2b	exon	ENSMUSG00000026987	ProperStrand	15	chr1	89673589	89673669	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-5.9364
chr3	31006610	31006703	protein_coding	Skil	intron	ENSMUSG00000027660	ProperStrand	23	chr18	73693166	73693190	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-7.4314
chr5	116011134	116011224	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	chr2	32818833	32818923	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-2.5385
chr7	28146782	28146798	protein_coding	Spnb4	exon	ENSMUSG00000011751	NonProperStrand	84	chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	1	-8.1558
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr5	145497839	145497890	protein_coding	Tmem130	utr3	ENSMUSG00000043388	ProperStrand	26	1	-10.4787
chr11	97642951	97643092	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	chr2	26494706	26494842	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	88	-0.7761
chr8	72612830	72612846	protein_coding	Hapln4	utr3	ENSMUSG00000007594	ProperStrand	5	chr19	8800377	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	3	-19.3459
chr4	109598504	109598524	protein_coding	Faf1	exon	ENSMUSG00000010517	ProperStrand	29	chr8	73419657	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	10	-inf
chr14	45949538	45949554	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	chr11	98297001	98297281	protein_coding	Erbb2	exon	ENSMUSG00000062312	ProperStrand	24	2	-18.5583
chr3	157204699	157204799	protein_coding	Zranb2	exon	ENSMUSG00000028180	ProperStrand	43	chr7	29136613	29136656	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.9440
chr19	10280565	10280581	protein_coding	1810006K21Rik	utr5	ENSMUSG00000036372	NonProperStrand	3	chr17	35258655	35258736	protein_coding	Gpank1	utr5	ENSMUSG00000092417	ProperStrand	2	1	-inf
chr4	55542943	55543019	protein_coding	Klf4	exon	ENSMUSG00000003032	ProperStrand	64	chr7	148634702	148634792	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-3.8650
chr10	58353277	58353296	protein_coding	Sh3rf3	intron	ENSMUSG00000037990	ProperStrand	18	chr12	17552965	17552995	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-7.4836
chr10	86155038	86155145	protein_coding	Hsp90b1	exon	ENSMUSG00000020048	ProperStrand	396	chr5	111121151	111121186	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-2.8592
chr2	26494708	26494775	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	chr13	21261552	21261583	tRNA	tRNA999-MetCAT	.	13406	ProperStrand	63	2	-5.2188
chr13	53285956	53285977	protein_coding	Ror2	intron	ENSMUSG00000021464	ProperStrand	46	chr8	73419685	73419775	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-6.1468
chr11	22897139	22897610	protein_coding	Cct4	exon	ENSMUSG00000007739	ProperStrand	81	chr10	107800720	107800810	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	1	-7.4718
chr17	46884450	46884466	protein_coding	Cnpy3	exon	ENSMUSG00000023973	ProperStrand	85	chr18	73693085	73693105	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-4.8480
chr17	45704047	45704063	protein_coding	Slc35b2	exon	ENSMUSG00000037089	NonProperStrand	9	chr9	15118244	15118303	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-7.2077
chr2	26459290	26459380	protein_coding	Agpat2	exon	ENSMUSG00000026922	ProperStrand	18	chr15	98350204	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-7.1449
chr8	46439259	46439275	protein_coding	Fam149a	exon	ENSMUSG00000070044	ProperStrand	57	chr1	162968442	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-6.1802
chr11	68839748	68839801	protein_coding	1500010J02Rik	exon	ENSMUSG00000020898	NonProperStrand	5	chr7	117166758	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	NonProperStrand	4	1	-20.9004
chr10	127565882	127565988	protein_coding	Baz2a	utr3	ENSMUSG00000040054	ProperStrand	274	chr1	162967547	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	4	-4.7141
chr7	28012435	28012483	protein_coding	Itpkc	exon	ENSMUSG00000003752	ProperStrand	10	chr18	33954845	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-7.0296
chr15	76005537	76009236	protein_coding	Plec	exon	ENSMUSG00000022565	ProperStrand	186	chr16	23110454	23110523	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-2.7240
chr5	138608635	138608826	protein_coding	Mcm7	exon	ENSMUSG00000029730	ProperStrand	258	chr12	106269284	106269374	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-1.6132
chr1	133832586	133832654	protein_coding	Nucks1	utr3	ENSMUSG00000026434	ProperStrand	59	chr10	110918581	110918671	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-3.4796
chr16	37549252	37549317	protein_coding	Rabl3	intron	ENSMUSG00000022827	ProperStrand	3	chr3	123210884	123210974	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-8.0648
chr5	46061193	46061238	protein_coding	Ncapg	utr5	ENSMUSG00000015880	ProperStrand	36	chr19	8799862	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	3	-13.7570
chr15	82000229	82000246	protein_coding	Srebf2	exon	ENSMUSG00000022463	ProperStrand	592	chr11	55296212	55296275	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-1.9663
chr10	79756395	79756434	protein_coding	Rps15	exon	ENSMUSG00000063457	ProperStrand	119	chr1	162965527	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.0912
chr3	68889191	68889221	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	chr17	71990924	71990999	snoRNA	ENSMUSG00000092713_CT010429.1	.	ENSMUSG00000092713	ProperStrand	182	2	-2.6799
chr7	25763334	25763391	protein_coding	Atp1a3	utr3	ENSMUSG00000040907	ProperStrand	66	chr19	25016725	25016791	snoRNA	ENSMUSG00000064896_SNORA19	.	ENSMUSG00000064896	ProperStrand	88	1	-12.3515
chr17	45706027	45706230	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr3	95980319	95980399	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	3	-3.2098
chr11	88704841	88704906	protein_coding	Akap1	intron	ENSMUSG00000018428	ProperStrand	45	chr11	80965641	80965658	protein_coding	Accn1	exon	ENSMUSG00000020704	NonProperStrand	228	1	-11.2161
chr2	103606713	103608602	protein_coding	Caprin1	utr3	ENSMUSG00000027184	ProperStrand	145	chr7	117189876	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	3	-5.1087
chr1	152268927	152269668	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	chr3	102861920	102861960	protein_coding	Csde1	utr3	ENSMUSG00000068823	ProperStrand	122	1	-7.4917
chr14	86670224	86670241	LINE	Lx8	L1	chr14Lx886670168	ProperStrand	1	chr7	13516150	13516203	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	1	-inf
chr7	134671464	134671517	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	chr3	85904465	85904531	snoRNA	ENSMUSG00000065847_SNORA32	.	ENSMUSG00000065847	ProperStrand	40	3	-19.3296
chr8	47292936	47292961	protein_coding	Slc25a4	exon	ENSMUSG00000031633	ProperStrand	53	chr19	8800359	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-3.7600
chr17	45708087	45708419	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr16	37882963	37882979	protein_coding	Lrrc58	utr3	ENSMUSG00000034158	NonProperStrand	45	1	-7.3027
chr3	55772264	55787679	protein_coding	Nbea	utr5	ENSMUSG00000027799	ProperStrand	53	chr13	51743565	51743656	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-7.1068
chr17	56853425	56853481	protein_coding	Vmac	utr3	ENSMUSG00000054723	ProperStrand	5	chr15	98350173	98350264	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	3	-20.4859
chr7	135847095	135848045	protein_coding	Mcmbp	exon	ENSMUSG00000048170	ProperStrand	87	chr17	35089181	35089233	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-4.7649
chr5	100855917	100855975	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	2	-4.2943
chr4	134454109	134454199	protein_coding	Tmem50a	utr3	ENSMUSG00000028822	ProperStrand	8	chr18	35716790	35716870	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-5.9895
chr17	24701962	24701986	protein_coding	Pkd1	exon	ENSMUSG00000032855	ProperStrand	61	chr9	64023228	64023329	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	1	-8.4121
chr4	131865855	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr9	95524996	95525035	snoRNA	ENSMUSG00000065346_SNORA4	.	ENSMUSG00000065346	ProperStrand	142	2	-1.3527
chr16	11144141	11144277	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr16	23111388	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	NonProperStrand	38	2	-17.7996
chr19	5799143	5802120	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr5	74489590	74489677	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	9	-4.5607
chr10	115922984	115923054	protein_coding	Cnot2	utr3	ENSMUSG00000020166	ProperStrand	12	chr16	23110853	23110943	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.4686
chr13	43296394	43296456	protein_coding	Gfod1	exon	ENSMUSG00000051335	ProperStrand	37	chr15	57978218	57978297	snoRNA	ENSMUSG00000080461_SNORA11	.	ENSMUSG00000080461	ProperStrand	171	1	-12.1877
chr2	179923276	179923302	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr8	98270015	98270096	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	3	-5.9569
chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	chr1	63225254	63225273	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	1	-4.2115
chr3	96132417	96132514	snRNA	ENSMUSG00000075978_U1	.	ENSMUSG00000075978	ProperStrand	132	chr7	29136636	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-2.2512
chr10	68323423	68323513	LINE	L1MC	L1	chr10L1MC68323236	ProperStrand	1	chr10	68323663	68323753	SINE	B3	B2	chr10B368323581	ProperStrand	1	1	-inf
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr12	110874224	110874292	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	1	-5.4979
chr13	96247406	96248477	protein_coding	S100z	exon	ENSMUSG00000021679	NonProperStrand	43	chr8	81029835	81029890	protein_coding	Rbmxl1	exon	ENSMUSG00000037070	ProperStrand	13	1	-17.1946
chr7	26149440	26149456	protein_coding	Megf8	exon	ENSMUSG00000045039	NonProperStrand	45	chr1	162968443	162968465	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-6.6485
chr6	119898661	119898695	protein_coding	Wnk1	exon	ENSMUSG00000045962	ProperStrand	221	chr13	51743567	51743635	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-4.3232
chr7	19661596	19661612	protein_coding	Dmwd	utr5	ENSMUSG00000030410	NonProperStrand	10	chr17	13112451	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	9	-inf
chr3	89580506	89580534	protein_coding	Ube2q1	exon	ENSMUSG00000042572	ProperStrand	32	chr16	23110963	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-3.1962
chr14	51395318	51395369	protein_coding	Ttc5	intron	ENSMUSG00000006288	ProperStrand	9	chr2	26768368	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	3	-19.3324
chr11	94007099	94007181	lincRNA	B230206L02Rik	intron	ENSMUSG00000086003	ProperStrand	13	chr4	131865931	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	6	-inf
chr12	109460710	109460726	protein_coding	Ccdc85c	intron	ENSMUSG00000084883	ProperStrand	157	chr19	8963136	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-0.8773
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr5	115939540	115939617	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	2	-6.0852
chr8	87813621	87813692	protein_coding	Vps35	exon	ENSMUSG00000031696	ProperStrand	27	chr12	17552952	17553042	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	2	-10.7943
chr5	100855902	100855922	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	1	-3.8362
chr9	50816824	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	chr13	76156115	76156132	protein_coding	Rfesd	utr5	ENSMUSG00000043190	ProperStrand	30	1	-13.2105
chr8	113578438	113578469	protein_coding	Aars	exon	ENSMUSG00000031960	ProperStrand	355	chr10	107800763	107800854	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	5	-18.2347
chr2	152156718	152156757	protein_coding	Rbck1	exon	ENSMUSG00000027466	ProperStrand	30	chr14	33005139	33005235	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	4	-16.5406
chr2	26494708	26494842	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	chr18	35714144	35714291	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	144	-inf
chr6	54693897	54693915	LTR	MTD	MaLR	chr6MTD54693624	NonProperStrand	1	chr2	130001071	130001094	protein_coding	Snrpb	exon	ENSMUSG00000027404	ProperStrand	21	1	-inf
chr10	127513693	127513817	protein_coding	Ptges3	utr3	ENSMUSG00000071072	ProperStrand	89	chr1	162966011	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-2.8894
chr13	107769635	107772607	protein_coding	Kif2a	exon	ENSMUSG00000021693	NonProperStrand	3	chr5	118376503	118376519	protein_coding	Nos1	exon	ENSMUSG00000029361	NonProperStrand	237	1	-16.9423
chr7	52084403	52084503	protein_coding	Nup62	exon	ENSMUSG00000043858	ProperStrand	47	chr11	69483209	69483277	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.8745
chr5	136260087	136261819	protein_coding	Mdh2	exon	ENSMUSG00000019179	ProperStrand	50	chr11	77994658	77994682	protein_coding	Tlcd1	utr3	ENSMUSG00000019437	ProperStrand	4	1	-19.2571
chr11	58682398	58682416	protein_coding	2810021J22Rik	utr5	ENSMUSG00000020491	ProperStrand	162	chr6	70794803	70794819	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	1	-9.4299
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr9	57105200	57105230	protein_coding	1700017B05Rik	exon	ENSMUSG00000032300	ProperStrand	22	1	-10.6339
chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	chr17	35089181	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	2	-4.0546
chr4	134259754	134259771	protein_coding	Man1c1	utr5	ENSMUSG00000037306	ProperStrand	22	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-5.5214
chr10	82456766	82456783	protein_coding	Chst11	intron	ENSMUSG00000034612	ProperStrand	170	chr15	34370545	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-3.2315
chr12	56499959	56508526	protein_coding	Psma6	exon	ENSMUSG00000021024	ProperStrand	13	chr14	76247731	76247811	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-7.1966
chr2	30479348	30479364	LINE	L1M5	L1	chr2L1M530479194	ProperStrand	10	chr2	74521176	74521193	protein_coding	Hoxd11	exon	ENSMUSG00000042499	NonProperStrand	7	1	-inf
chr10	20080841	20080858	protein_coding	Fam54a	utr3	ENSMUSG00000019992	ProperStrand	232	chr4	126249684	126250449	protein_coding	Clspn	exon	ENSMUSG00000042489	ProperStrand	89	1	-9.8098
chr5	108334227	108336485	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	chr17	26360453	26360533	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	1	-1.8856
chr10	34028888	34028906	protein_coding	Nt5dc1	intron	ENSMUSG00000039480	ProperStrand	16	chr16	23111374	23111395	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.4608
chr3	65334826	65334892	protein_coding	Tiparp	intron	ENSMUSG00000034640	ProperStrand	14	chr9	15119632	15119675	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.3767
chr4	138836408	138836453	protein_coding	Capzb	exon	ENSMUSG00000028745	ProperStrand	44	chr3	123210928	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.5877
chr11	120672287	120672315	protein_coding	Fasn	exon	ENSMUSG00000025153	ProperStrand	298	chr5	118376503	118376519	protein_coding	Nos1	exon	ENSMUSG00000029361	NonProperStrand	237	1	-7.3591
chr19	39034220	39034237	protein_coding	Hells	exon	ENSMUSG00000025001	ProperStrand	23	chr17	24857781	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.0279
chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	chr2	130101971	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	3	-1.4963
chr2	136577881	136577899	protein_coding	Snap25	intron	ENSMUSG00000027273	NonProperStrand	2	chr8	73419657	73419729	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-inf
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr2	155937571	155937629	protein_coding	Rbm12	utr5	ENSMUSG00000089824	ProperStrand	26	1	-13.0613
mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr8	108734812	108734828	protein_coding	Slc7a6os	utr5	ENSMUSG00000033106	NonProperStrand	29	1	-7.3498
chr11	20991333	20991349	protein_coding	Peli1	utr5	ENSMUSG00000020134	ProperStrand	69	chr13	58496029	58496067	protein_coding	Hnrnpk	exon	ENSMUSG00000021546	ProperStrand	117	1	-11.6907
chr1	94536284	94538494	protein_coding	Myeov2	exon	ENSMUSG00000073616	ProperStrand	4	chr16	23111387	23111467	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-6.3168
chr7	150429747	150429763	protein_coding	Kcnq1	intron	ENSMUSG00000009545	NonProperStrand	133	chr16	33625246	33646649	protein_coding	Slc12a8	exon	ENSMUSG00000035506	ProperStrand	52	1	-12.0037
chr3	45780645	45780665	LINE	Lx2B	L1	chr3Lx2B45780445	ProperStrand	34	chrX	98795469	98795538	protein_coding	Taf1	utr3	ENSMUSG00000031314	ProperStrand	61	1	-14.4174
chr11	74977762	74977807	protein_coding	Smg6	utr3	ENSMUSG00000038290	ProperStrand	29	chr5	32175472	32175497	protein_coding	Bre	intron	ENSMUSG00000052139	ProperStrand	33	2	-19.3531
chr7	37384310	37384327	LTR	ORR1E	MaLR	chr7ORR1E37384234	NonProperStrand	30	chr17	24857716	24857762	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.5270
chr3	106909227	106909243	protein_coding	Kcna2	utr3	ENSMUSG00000040724	ProperStrand	17	chr11	97643008	97643037	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.8122
chr9	63868722	63868739	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	chr3	88497863	88497973	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	5	-12.9320
chr14	54987489	54987521	protein_coding	Oxa1l	exon	ENSMUSG00000000959	ProperStrand	31	chr10	105010980	105010997	protein_coding	Tmtc2	utr5	ENSMUSG00000036019	ProperStrand	72	1	-14.2795
chr19	29000301	29000318	protein_coding	4430402I18Rik	intron	ENSMUSG00000064202	ProperStrand	5	chr7	29136525	29136573	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-7.2327
chr11	119519029	119532630	protein_coding	Rptor	exon	ENSMUSG00000025583	ProperStrand	76	chr9	120038497	120038551	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.6228
chr7	133690437	133690484	protein_coding	Eif3c	utr3	ENSMUSG00000030738	ProperStrand	92	chr15	80711204	80711236	protein_coding	Tnrc6b	exon	ENSMUSG00000047888	ProperStrand	59	3	-19.6863
chr3	152450607	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	chr7	134671439	134671504	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-3.5081
chr15	66945797	66945815	protein_coding	St3gal1	utr5	ENSMUSG00000013846	NonProperStrand	4	chr1	162968213	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-12.4736
chr9	120037971	120038055	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	8	-0.7609
chr13	58316722	58316822	protein_coding	Ubqln1	utr5	ENSMUSG00000005312	ProperStrand	49	chr7	118219574	118219625	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-4.5566
chr2	79843543	79843559	protein_coding	Pde1a	intron	ENSMUSG00000059173	NonProperStrand	275	chr8	32260337	32260425	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-1.9126
chr14	80262508	80262525	lincRNA	Gm6999	intron	ENSMUSG00000075495	ProperStrand	265	chr15	82980101	82980225	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-4.2473
chr11	113523870	113523887	protein_coding	Cog1	utr3	ENSMUSG00000018661	ProperStrand	51	chr17	24857718	24857808	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.5733
chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	chr4	122968584	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-0.8142
chr14	47948933	47948949	LTR	RMER17A2	ERVK	chr14RMER17A247948307	NonProperStrand	43	chr1	162965531	162965598	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.8927
chr17	49596264	49596280	protein_coding	Daam2	utr3	ENSMUSG00000040260	ProperStrand	4	chr7	116665142	116665231	protein_coding	Rpl27a	exon	ENSMUSG00000046364	ProperStrand	149	1	-17.1714
mmu-miR-292a-3p	2	24	miRNA	mmu-miR-292a-3p	.	mmu-miR-292a-3p	ProperStrand	38	chr7	118219692	118219740	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-8.3353
chr11	106116106	106116683	protein_coding	Ftsj3	exon	ENSMUSG00000020706	ProperStrand	64	chr14	76247712	76247792	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-4.0501
chr3	16045156	16045246	LINE	L1_Mus2	L1	chr3L1_Mus216043525	NonProperStrand	1	chr5	83553073	83553163	LINE	L1Md_F2	L1	chr5L1Md_F283549698	NonProperStrand	1	1	-inf
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chrX	130496426	130496668	protein_coding	Sytl4	exon	ENSMUSG00000031255	ProperStrand	169	1	-5.7484
mmu-miR-709	2	19	miRNA	mmu-miR-709	.	mmu-miR-709	ProperStrand	20	chr16	23110910	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-3.0614
chr4	11100104	11100134	protein_coding	Trp53inp1	utr3	ENSMUSG00000028211	ProperStrand	35	chr7	71036034	71036124	protein_coding	Klf13	utr3	ENSMUSG00000052040	ProperStrand	28	1	-15.9196
chr4	32756011	32756448	protein_coding	Mdn1	exon	ENSMUSG00000058006	NonProperStrand	16	chr8	72266537	72266624	protein_coding	Zfp963	utr3	ENSMUSG00000092260	ProperStrand	1	1	-inf
chr8	25920545	25921169	protein_coding	Adam5	exon	ENSMUSG00000031554	ProperStrand	49	chr1	194571820	194571880	snRNA	ENSMUSG00000064881_U5	.	ENSMUSG00000064881	ProperStrand	187	1	-11.4418
chr8	13416895	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr3	89016834	89016858	protein_coding	Mtx1	exon	ENSMUSG00000064068	ProperStrand	4	1	-12.1048
chr11	94906337	94906398	protein_coding	Itga3	utr3	ENSMUSG00000001507	ProperStrand	21	chr16	57391763	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	1	-9.9121
chr1	121733746	121733806	protein_coding	Ptpn4	utr5	ENSMUSG00000026384	ProperStrand	7	chr3	88715214	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-11.6453
chr10	93036771	93036787	protein_coding	Ccdc38	exon	ENSMUSG00000036168	ProperStrand	12	chr4	131865855	131865905	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.6729
chr2	22444215	22444295	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	chr3	68889026	68889116	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	6	-1.4812
chr16	8689097	8689114	protein_coding	Usp7	utr3	ENSMUSG00000022710	NonProperStrand	11	chr11	61533639	61533660	protein_coding	Slc5a10	intron	ENSMUSG00000042371	ProperStrand	11	1	-19.3304
chr1	39425906	39426006	protein_coding	Rpl31	intron	ENSMUSG00000073702	ProperStrand	41	chr19	8798765	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-5.5423
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr14	57204539	57204555	protein_coding	Parp4	exon	ENSMUSG00000054509	NonProperStrand	113	2	-11.9386
chr9	63425102	63425123	protein_coding	Iqch	intron	ENSMUSG00000037801	ProperStrand	14	chr4	131865855	131865922	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-7.3753
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr4	109655574	109655591	protein_coding	Dmrta2	utr3	ENSMUSG00000047143	NonProperStrand	7	1	-17.6356
chr1	173934976	173936299	protein_coding	Vangl2	exon	ENSMUSG00000026556	ProperStrand	37	chr15	79913288	79913321	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-7.5114
chr1	74327389	74327461	protein_coding	Aamp	exon	ENSMUSG00000006299	ProperStrand	16	chr4	131908825	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.4136
chr10	60885912	60886002	protein_coding	Nodal	exon	ENSMUSG00000037171	ProperStrand	30	chr16	23110923	23111003	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0481
chrX	11626352	11626371	protein_coding	Bcor	exon	ENSMUSG00000040363	ProperStrand	20	chr16	23111373	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.0472
chr11	57870823	57874801	protein_coding	Larp1	exon	ENSMUSG00000037331	ProperStrand	201	chr3	68889026	68889128	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	7	-11.3555
chr13	73946469	73946529	protein_coding	Slc12a7	exon	ENSMUSG00000017756	ProperStrand	80	chr17	91177463	91177480	protein_coding	Nrxn1	intron	ENSMUSG00000024109	NonProperStrand	22	1	-14.7743
chr1	161968337	161968417	LINE	L2c	L2	chr1L2c161968359	NonProperStrand	1	chr1	161968741	161968831	SINE	PB1D7	Alu	chr1PB1D7161968693	ProperStrand	1	1	-inf
chr8	123978228	123978245	protein_coding	Gm20388	intron	ENSMUSG00000092329	ProperStrand	295	chr5	121655031	121655099	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-1.1289
chr10	80642371	80642428	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-1.1636
chrX	153766338	153766357	protein_coding	Phex	intron	ENSMUSG00000057457	NonProperStrand	5	chr11	106362640	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-12.5579
chr15	84101747	84103941	protein_coding	Parvb	exon	ENSMUSG00000022438	ProperStrand	127	chr10	95502286	95502386	protein_coding	Eea1	utr3	ENSMUSG00000036499	ProperStrand	82	1	-11.1799
chr19	36927356	36929398	protein_coding	Tnks2	exon	ENSMUSG00000024811	ProperStrand	133	chr9	120038552	120038607	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.7077
chr10	110918622	110918712	protein_coding	Nap1l1	intron	ENSMUSG00000058799	ProperStrand	185	chr14	76247725	76247805	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-2.1616
chr17	31640574	31640590	protein_coding	Wdr4	exon	ENSMUSG00000024037	NonProperStrand	18	chr7	127530027	127530043	protein_coding	Abca15	intron	ENSMUSG00000054746	NonProperStrand	2	1	-inf
chr5	108336390	108336495	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	chr7	67125788	67125831	snoRNA	ENSMUSG00000089375_Snord107	.	ENSMUSG00000089375	ProperStrand	451	5	-7.5922
chr11	120684120	120685346	protein_coding	Fasn	utr5	ENSMUSG00000025153	ProperStrand	298	chr15	80087088	80087189	protein_coding	Atf4	exon	ENSMUSG00000042406	ProperStrand	6	1	-14.8585
chr8	14945280	14945304	protein_coding	Arhgef10	exon	ENSMUSG00000071176	ProperStrand	22	chr10	90581040	90581138	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-6.7871
chr3	100750650	100750740	protein_coding-noncoding	Ttf2	utr3	ENSMUSG00000033222	ProperStrand	24	chr8	98269986	98270066	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-7.3632
chr14	24251850	24251866	protein_coding	Kcnma1	intron	ENSMUSG00000063142	NonProperStrand	104	chr4	122970392	122970438	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-6.3247
chr7	19687633	19687650	protein_coding-noncoding	Gm4969	utr3	ENSMUSG00000085601	ProperStrand	1	chr8	73419657	73419757	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-inf
chr17	26644393	26644410	protein_coding-noncoding	Dusp1	utr3	ENSMUSG00000024190	ProperStrand	7	chr16	23110828	23110893	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-6.1472
chr2	58784889	58784906	protein_coding	Ccdc148	intron	ENSMUSG00000036641	ProperStrand	21	chr17	35089181	35089229	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-7.5760
chr12	114359283	114361329	protein_coding	Mta1	exon	ENSMUSG00000021144	ProperStrand	74	chr1	9932592	9932623	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-7.3115
chr2	90235300	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr13	46862888	46863008	snoRNA	ENSMUSG00000064558_SNORA55	.	ENSMUSG00000064558	ProperStrand	187	6	-13.8841
chr2	179322379	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr4	45529398	45529415	protein_coding	Shb	intron	ENSMUSG00000044813	ProperStrand	32	1	-12.4817
chr17	30355820	30355920	protein_coding	Btbd9	utr3	ENSMUSG00000062202	ProperStrand	31	chr9	120038613	120038675	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	7	-20.5880
chr5	143666371	143668344	protein_coding	Actb	exon	ENSMUSG00000029580	ProperStrand	446	chr19	8963027	8963178	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	58	-inf
chr14	124243064	124243085	protein_coding	Itgbl1	exon	ENSMUSG00000032925	ProperStrand	159	chr14	33005161	33005225	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-2.2545
chr11	117222126	117222584	protein_coding	Sept9	utr3	ENSMUSG00000059248	ProperStrand	60	chr7	116664841	116664925	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	4	-9.1764
chr5	139231282	139231298	protein_coding	Fam20c	utr5	ENSMUSG00000025854	NonProperStrand	4	chr1	72290888	72290987	snRNA	ENSMUSG00000093111_AC120136.1	.	ENSMUSG00000093111	ProperStrand	137	1	-17.2973
chr10	127722453	127722469	protein_coding	Stat2	exon	ENSMUSG00000040033	NonProperStrand	14	chr15	79908960	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-8.3920
chr2	33161464	33161554	protein_coding	Ralgps1	intron	ENSMUSG00000038831	ProperStrand	75	chr10	23505200	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-0.9446
chr2	60588817	60588846	protein_coding	Rbms1	utr3	ENSMUSG00000026970	ProperStrand	26	chr1	162968212	162968273	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-8.4935
chr12	111878715	111878745	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr2	90419566	90419640	protein_coding	Ptprj	intron	ENSMUSG00000025314	ProperStrand	29	1	-10.0184
chr12	55746653	55746683	protein_coding	1110002B05Rik	utr3	ENSMUSG00000044408	ProperStrand	4	chr5	111121066	111121117	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	3	-inf
chr16	87729964	87730064	protein_coding	Bach1	exon	ENSMUSG00000025612	ProperStrand	32	chr6	115757992	115758041	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-6.7146
chr2	34628794	34628825	protein_coding	Hspa5	exon	ENSMUSG00000026864	ProperStrand	181	chr9	120037980	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-2.6726
chr13	44943751	45008651	protein_coding	Jarid2	exon	ENSMUSG00000038518	ProperStrand	372	chr17	24857746	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	5	-2.1302
chr11	54742714	54744298	protein_coding	Tnip1	exon	ENSMUSG00000020400	ProperStrand	52	chr4	135846171	135846187	protein_coding	Zfp46	exon	ENSMUSG00000051351	NonProperStrand	85	1	-12.9014
chr11	102294588	102294610	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr10	127521219	127521271	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	1	-4.4569
chr5	107067276	107067353	protein_coding	Zfp644	exon	ENSMUSG00000049606	ProperStrand	35	chr4	116828379	116828439	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	5	-inf
chr6	30162058	30162074	protein_coding	Ube2h	utr3	ENSMUSG00000039159	ProperStrand	96	chr11	62416597	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-4.2641
chr9	78023109	78023148	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr16	91014981	91015021	protein_coding	Gcfc1	utr3	ENSMUSG00000022974	ProperStrand	17	2	-13.4517
chr19	43898510	43898600	protein_coding	Abcc2	intron	ENSMUSG00000025194	NonProperStrand	3	chr19	43868087	43868177	protein_coding	Abcc2	intron	ENSMUSG00000025194	ProperStrand	3	1	-inf
chr19	53089741	53089769	protein_coding	Xpnpep1	intron	ENSMUSG00000025027	ProperStrand	49	chr10	90581034	90581195	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	5	-21.8422
chr13	117089727	117089744	protein_coding	Isl1	exon	ENSMUSG00000042258	NonProperStrand	17	chr14	33005038	33005090	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-6.4617
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	135153314	135153332	protein_coding	Plekha6	intron	ENSMUSG00000041757	ProperStrand	22	1	-6.4314
chr3	152450608	152450627	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	chr5	43626364	43626380	protein_coding	Gm7854	exon	ENSMUSG00000085720	ProperStrand	1	1	-inf
chr3	88343341	88343359	protein_coding	Mex3a	utr3	ENSMUSG00000074480	ProperStrand	7	chr2	26494708	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-7.3461
mmu-miR-6240	2	23	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr17	56738315	56738449	protein_coding	Safb	exon	ENSMUSG00000071054	ProperStrand	79	1	-5.3653
chr11	96628777	96628794	antisense	Gm11537	.	ENSMUSG00000085242	NonProperStrand	4	chr7	50720125	50720151	protein_coding	Vsig10l	intron	ENSMUSG00000070604	NonProperStrand	1	1	-inf
chr11	97661150	97668148	protein_coding	Lasp1	exon	ENSMUSG00000038366	ProperStrand	65	chr16	23111382	23111445	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-3.5910
chr4	141238605	141238637	protein_coding	Ddi2	utr3	ENSMUSG00000078515	ProperStrand	79	chr10	90581034	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	2	-7.1489
chr4	126428411	126428501	protein_coding	Ncdn	intron	ENSMUSG00000028833	ProperStrand	35	chr5	108334195	108334275	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-5.8733
chr17	80600122	80600169	protein_coding	Srsf7	utr3	ENSMUSG00000024097	ProperStrand	31	chr2	26768368	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-6.9097
chr14	32315532	32315632	protein_coding	Eaf1	exon	ENSMUSG00000021890	ProperStrand	10	chr18	73693166	73693186	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-9.1448
chr11	96180923	96180944	protein_coding	Hoxb4	intron	ENSMUSG00000038692	ProperStrand	2	chr1	89673712	89673781	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-10.5460
chr1	155938115	155938134	LTR	RLTR28	ERVL	chr1RLTR28155937955	ProperStrand	1	chr1	59748785	59748845	snoRNA	ENSMUSG00000077345_Snord70	.	ENSMUSG00000077345	ProperStrand	61	1	-inf
chr9	120866250	120866271	protein_coding	Ctnnb1	exon	ENSMUSG00000006932	ProperStrand	214	chr17	35089181	35089236	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	2	-5.3106
chr6	148303418	148304017	protein_coding	Rps4y2	exon	ENSMUSG00000063171	ProperStrand	47	chr10	23505152	23505270	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-2.9598
chrX	20292174	20293888	protein_coding	Usp11	exon	ENSMUSG00000031066	ProperStrand	29	chr3	95980309	95980389	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-8.3138
chr11	120389130	120389149	antisense	Gm11789	.	ENSMUSG00000084983	ProperStrand	4	chr9	110544350	110544366	protein_coding	Nbeal2	exon	ENSMUSG00000056724	ProperStrand	161	1	-17.0473
chr11	3821802	3821834	protein_coding	Tcn2	intron	ENSMUSG00000020432	ProperStrand	7	chr4	131866177	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-7.9553
chr9	99211928	99211945	protein_coding	Esyt3	utr3	ENSMUSG00000037681	ProperStrand	7	chr18	35714196	35714288	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-7.7147
chr4	137071546	137071616	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	chr10	61329160	61330213	protein_coding	Col13a1	exon	ENSMUSG00000058806	ProperStrand	120	1	-6.7263
chr9	78023109	78023151	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr15	36535557	36535657	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	1	-1.1178
chr9	75032150	75032218	protein_coding	Myo5a	exon	ENSMUSG00000034593	ProperStrand	89	chr4	131865412	131865512	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-3.2731
chr2	120349715	120349790	protein_coding	Zfp106	exon	ENSMUSG00000027288	ProperStrand	199	chr7	28303863	28303963	protein_coding	Prx	utr3	ENSMUSG00000053198	ProperStrand	21	2	-18.5680
chr7	118225026	118225093	protein_coding	Eif4g2	utr5	ENSMUSG00000005610	ProperStrand	134	chrX	71612461	71612479	protein_coding	Ubl4	utr3	ENSMUSG00000015290	ProperStrand	16	3	-19.9480
chr1	102076758	102076791	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	chr17	39985363	39985724	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	2	-4.1345
chr15	96192215	96192261	protein_coding	Arid2	exon	ENSMUSG00000033237	ProperStrand	34	chr19	43269721	43269737	protein_coding	Hpse2	intron	ENSMUSG00000074852	NonProperStrand	48	1	-14.8965
chr2	90235297	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	164299197	164299213	protein_coding	Trp53tg5	utr5	ENSMUSG00000017720	ProperStrand	2	1	-11.8388
chr13	93430986	93431025	protein_coding	Serinc5	exon	ENSMUSG00000021703	ProperStrand	57	chr7	29073210	29073330	protein_coding	BC089491	exon	ENSMUSG00000046750	ProperStrand	62	1	-13.3527
chr11	87172190	87172206	protein_coding	Ppm1e	exon	ENSMUSG00000046442	ProperStrand	112	chr15	79908954	79908983	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-4.2709
chr2	5362406	5362435	protein_coding	Camk1d	intron	ENSMUSG00000039145	ProperStrand	50	chr2	26494750	26494840	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.4386
chr4	135327523	135329683	protein_coding	Myom3	exon	ENSMUSG00000037139	NonProperStrand	62	chr17	35089182	35089233	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-5.4211
chrX	165695583	165695599	protein_coding	Arhgap6	exon	ENSMUSG00000031355	ProperStrand	74	chr15	98350209	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-4.3591
chr10	45396261	45396320	protein_coding	Hace1	exon	ENSMUSG00000038822	ProperStrand	8	chr1	162968212	162968263	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-10.9356
chr10	62205681	62205771	LTR	ORR1D2	MaLR	chr10ORR1D262205626	NonProperStrand	1	chr4	131866155	131866235	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-inf
chr1	94356967	94356992	protein_coding	Ndufa10	exon	ENSMUSG00000026260	ProperStrand	14	chr16	23110960	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.2008
chr6	129628834	129628851	protein_coding	Klrc1	exon	ENSMUSG00000030167	NonProperStrand	49	chr1	162965530	162965588	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.6485
chr9	120039533	120039660	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	chr15	71624750	71624797	snoRNA	ENSMUSG00000088895_SNORA81	.	ENSMUSG00000088895	ProperStrand	348	4	-3.4661
mmu-miR-6238	1	19	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr1	88247799	88247822	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-2.5376
chr9	39882020	39882036	protein_coding	Olfr982	exon	ENSMUSG00000049010	NonProperStrand	35	chr16	23111450	23111492	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.0755
chr8	120192082	120192098	protein_coding	Sdr42e1	intron	ENSMUSG00000034308	NonProperStrand	4	chr9	120039532	120039564	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-8.8220
chr4	43594177	43594399	protein_coding	Rgp1	exon	ENSMUSG00000028468	ProperStrand	22	chrX	34622906	34622968	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	4	-16.0073
chr9	57385425	57385441	protein_coding	2310046O06Rik	utr5	ENSMUSG00000032305	ProperStrand	135	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-7.7491
chr4	43505812	43505902	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr4	128688585	128688608	protein_coding	Ak2	utr3	ENSMUSG00000028792	ProperStrand	43	1	-3.6800
chr9	108461949	108462012	protein_coding	Qrich1	utr3	ENSMUSG00000006673	ProperStrand	30	chr1	167522953	167523049	protein_coding	Mpzl1	utr3	ENSMUSG00000026566	ProperStrand	27	1	-16.3564
chr11	78101244	78101529	protein_coding	2610507B11Rik	exon	ENSMUSG00000010277	ProperStrand	246	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	2	-6.9872
chr17	78771105	78771122	protein_coding	Crim1	intron	ENSMUSG00000024074	ProperStrand	19	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	2	-12.0587
chr9	33539512	33539529	LINE	L1_Mur3	L1	chr9L1_Mur333538062	ProperStrand	1	chr2	136282404	136282420	LTR	LTR37B	ERV1	chr2LTR37B136282351	NonProperStrand	1	1	-inf
chr12	111866193	111866212	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr5	23825941	23825957	protein_coding	Kcnh2	exon	ENSMUSG00000038319	ProperStrand	242	1	-5.7910
chr8	124936905	124936968	protein_coding	Zc3h18	exon	ENSMUSG00000017478	ProperStrand	55	chr11	97642952	97643080	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	5	-12.0897
chr16	24984504	24984521	protein_coding	Lpp	utr3	ENSMUSG00000033306	NonProperStrand	189	chr9	120039545	120039623	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.4181
chr3	89143790	89143817	protein_coding	Adam15	utr3	ENSMUSG00000028041	ProperStrand	40	chr12	110874223	110874290	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	1	-10.7950
chr8	86455156	86455592	protein_coding	Lphn1	exon	ENSMUSG00000013033	ProperStrand	221	chr10	127895516	127895568	tRNA	tRNA688-SerCGA	.	1677661	ProperStrand	71	1	-10.3604
chr1	187153157	187153220	protein_coding	Iars2	utr5	ENSMUSG00000026618	ProperStrand	68	chr4	131865935	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-2.9425
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr8	125741087	125741105	protein_coding	4732415M23Rik	intron	ENSMUSG00000048478	ProperStrand	88	1	-7.0329
chr1	136320647	136321349	protein_coding	Adipor1	exon	ENSMUSG00000026457	ProperStrand	48	chr2	71654740	71654800	protein_coding	Itga6	exon	ENSMUSG00000027111	ProperStrand	54	1	-13.9783
chr5	107965954	107965973	protein_coding	1700028K03Rik	intron	ENSMUSG00000089798	ProperStrand	5	chr11	6428077	6428170	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-13.4048
chr19	8782553	8782573	protein_coding	Slc3a2	exon	ENSMUSG00000010095	ProperStrand	63	chr3	100684205	100684228	protein_coding	Vtcn1	intron	ENSMUSG00000051076	ProperStrand	4	1	-19.4982
chr9	59516857	59518285	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr7	134341340	134341357	protein_coding	Tbc1d10b	utr3	ENSMUSG00000042492	ProperStrand	187	1	-4.9494
chr3	135101356	135101403	protein_coding	Ube2d3	intron	ENSMUSG00000078578	ProperStrand	34	chr9	15118353	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-4.5374
chr10	79170657	79170704	protein_coding	Bsg	intron	ENSMUSG00000023175	ProperStrand	107	chr5	113665869	113665889	protein_coding	Tmem211	intron	ENSMUSG00000066964	NonProperStrand	4	1	-17.9275
chr3	55772264	55787679	protein_coding	Nbea	utr5	ENSMUSG00000027799	ProperStrand	53	chr10	75322200	75322263	protein_coding	Mif	utr3	ENSMUSG00000033307	ProperStrand	146	1	-11.7790
chr9	42693956	42693972	protein_coding	Grik4	intron	ENSMUSG00000032017	NonProperStrand	14	chr8	125626932	125626984	snoRNA	ENSMUSG00000064450_Snord68	.	ENSMUSG00000064450	ProperStrand	181	1	-14.0667
chr1	59539683	59539700	protein_coding	Fzd7	utr5	ENSMUSG00000041075	ProperStrand	373	chr4	56910551	56910618	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-2.6725
chr14	55195772	55195862	protein_coding	Jub	exon	ENSMUSG00000022178	ProperStrand	25	chr4	131908814	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-6.9248
mmu-miR-6240	4	23	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr10	86157103	86157195	protein_coding	Hsp90b1	exon	ENSMUSG00000020048	ProperStrand	396	1	-2.3933
chr9	105362072	105366957	protein_coding	Atp2c1	exon	ENSMUSG00000032570	ProperStrand	21	chr11	69483194	69483274	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.3745
chr4	131908363	131908461	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr5	3704870	3706203	protein_coding	Ankib1	exon	ENSMUSG00000040351	NonProperStrand	98	3	-14.3799
chr5	116065399	116065489	protein_coding	Gcn1l1	exon	ENSMUSG00000041638	ProperStrand	408	chr11	69481356	69481465	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	9	-9.3955
chr2	26493428	26493518	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr2	146125209	146125227	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	1	-4.0317
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	106101408	106102875	protein_coding	Ddx42	exon	ENSMUSG00000020705	ProperStrand	26	1	-6.0972
chr14	68318252	68318361	protein_coding	Cdca2	exon	ENSMUSG00000048922	ProperStrand	50	chr19	8963027	8963043	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	5	-11.9923
chr19	7049979	7051080	protein_coding	Ppp1r14b	exon	ENSMUSG00000056612	ProperStrand	5	chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-10.9706
chr11	100566629	100566713	protein_coding	Kat2a	exon	ENSMUSG00000020918	ProperStrand	68	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-6.6762
chr13	97420013	97420103	protein_coding	Hmgcr	utr3	ENSMUSG00000021670	ProperStrand	56	chr19	8800356	8800436	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-3.6576
chr4	118807037	118808395	protein_coding	Slc2a1	exon	ENSMUSG00000028645	ProperStrand	361	chr11	97631139	97631157	tRNA	tRNA1444-CysGCA	.	1558798	ProperStrand	91	1	-8.8833
chr13	74494655	74494675	protein_coding	Ccdc127	utr3	ENSMUSG00000021578	NonProperStrand	54	chr16	23111374	23111508	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	6	-10.0290
chr17	32290866	32290905	protein_coding	Notch3	exon	ENSMUSG00000038146	ProperStrand	181	chr1	162965994	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-1.7125
chr4	116828389	116828479	protein_coding	Rps8	intron	ENSMUSG00000047675	ProperStrand	262	chr1	161270447	161270527	snoRNA	ENSMUSG00000089536_Scarna3a	.	ENSMUSG00000089536	ProperStrand	247	1	-7.5322
chr5	143648750	143650352	protein_coding	Fbxl18	exon	ENSMUSG00000066640	ProperStrand	64	chr14	31827477	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-6.8166
chr9	74906910	74907010	protein_coding	Arpp19	utr3	ENSMUSG00000007656	ProperStrand	3	chr7	6084029	6084102	protein_coding	Zfp787	exon	ENSMUSG00000046792	ProperStrand	16	1	-inf
chr3	152450610	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	chr8	98269959	98270096	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	4	-6.1882
chr18	14581325	14581415	LINE	Lx9	L1	chr18Lx914580928	NonProperStrand	1	chr18	53428403	53428493	protein_coding	Snx24	intron	ENSMUSG00000024535	NonProperStrand	14	1	-inf
chr10	90459995	90462399	protein_coding	Apaf1	exon	ENSMUSG00000019979	ProperStrand	27	chr19	8963096	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.6995
chr9	109984589	109984689	protein_coding	Mtap4	utr3	ENSMUSG00000032479	ProperStrand	188	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-1.7470
chr9	47503018	47503034	protein_coding	Cadm1	intron	ENSMUSG00000032076	ProperStrand	77	chr13	45015509	45015561	protein_coding	Jarid2	utr3	ENSMUSG00000038518	ProperStrand	372	1	-9.1579
chr10	127560676	127560886	protein_coding	Baz2a	exon	ENSMUSG00000040054	ProperStrand	274	chr10	79519140	79519171	protein_coding	Gpx4	utr3	ENSMUSG00000075706	ProperStrand	55	1	-10.4439
chr4	132289280	132289336	protein_coding	Smpdl3b	utr3	ENSMUSG00000028885	ProperStrand	11	chr15	98593041	98593138	protein_coding	Arf3	intron	ENSMUSG00000051853	ProperStrand	41	4	-inf
chr6	51433078	51433114	protein_coding	Cbx3	utr3	ENSMUSG00000029836	ProperStrand	19	chr11	97641452	97641577	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	8	-19.0959
chr7	67125756	67125831	snoRNA	ENSMUSG00000089375_Snord107	.	ENSMUSG00000089375	ProperStrand	451	chr3	68889028	68889193	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	5	-3.4821
chr3	96062851	96062933	LTR	RMER6A	ERVK	chr3RMER6A96062838	ProperStrand	1	chr10	120288388	120288407	protein_coding	Msrb3	intron	ENSMUSG00000051236	ProperStrand	24	1	-inf
chr7	24779190	24779213	SINE	ID_B1	B4	chr7ID_B124779183	NonProperStrand	54	chr11	6523906	6523922	protein_coding	Tbrg4	exon	ENSMUSG00000000384	NonProperStrand	56	1	-13.6630
chr2	90235294	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	36388906	36389233	protein_coding	Ankrd27	exon	ENSMUSG00000034867	ProperStrand	132	2	-5.1815
chr11	51926656	51926700	protein_coding	Ppp2ca	exon	ENSMUSG00000020349	ProperStrand	22	chr11	97642952	97643036	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-10.5077
chr4	33084276	33084294	protein_coding	Rragd	intron	ENSMUSG00000028278	ProperStrand	14	chr11	116938663	116938710	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-9.0930
chr11	68067261	68067277	protein_coding	Ntn1	intron	ENSMUSG00000020902	NonProperStrand	194	chr1	89673660	89673760	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-1.3380
chr9	59518469	59518488	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr9	39358287	39358304	protein_coding	Olfr958	exon	ENSMUSG00000050853	NonProperStrand	266	1	-4.2776
chr19	44379282	44379372	protein_coding	Scd2	utr3	ENSMUSG00000025203	ProperStrand	219	chr4	151364546	151364626	protein_coding	Phf13	utr3	ENSMUSG00000047777	ProperStrand	38	1	-11.6382
chr2	160721184	160721200	protein_coding	Lpin3	exon	ENSMUSG00000027412	ProperStrand	31	chr4	43034900	43034950	protein_coding	Pigo	exon	ENSMUSG00000028454	ProperStrand	6	1	-18.6658
chr7	19191721	19191737	protein_coding	Psg23	utr3	ENSMUSG00000074359	NonProperStrand	2	chr4	131908687	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-8.0336
chr11	32113274	32113291	protein_coding	Rhbdf1	exon	ENSMUSG00000020282	ProperStrand	23	chr4	155000883	155000952	protein_coding	Cdk11b	exon	ENSMUSG00000029062	ProperStrand	92	1	-14.4000
chr17	47881187	47881267	protein_coding	Tfeb	intron	ENSMUSG00000023990	ProperStrand	78	chr18	53366702	53366792	protein_coding	Snx2	intron	ENSMUSG00000034484	ProperStrand	6	1	-17.3438
chr8	68598976	68599066	protein_coding	March1	intron	ENSMUSG00000036469	NonProperStrand	14	chr1	173820068	173820148	protein_coding	Cd84	utr3	ENSMUSG00000038147	NonProperStrand	1	1	-inf
chr6	122679531	122685541	protein_coding	Slc2a3	exon	ENSMUSG00000003153	ProperStrand	682	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	2	-3.7236
chr17	34324656	34324673	protein_coding	Psmb9	utr5	ENSMUSG00000024337	ProperStrand	60	chr6	115799245	115799314	protein_coding	Mbd4	exon	ENSMUSG00000030322	ProperStrand	4	1	-19.2310
chr5	143665442	143665465	protein_coding	Actb	utr3	ENSMUSG00000029580	ProperStrand	446	chr17	13112514	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	3	-3.5900
chr3	8930020	8930118	protein_coding	Tpd52	utr3	ENSMUSG00000027506	ProperStrand	37	chr16	23110530	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.3186
chr12	88613551	88613576	protein_coding	Ahsa1	exon	ENSMUSG00000021037	ProperStrand	58	chr1	72272872	72273001	snRNA	ENSMUSG00000075752_U2	.	ENSMUSG00000075752	ProperStrand	535	1	-9.0021
chr14	117324878	117324894	protein_coding	Gpc6	utr5	ENSMUSG00000058571	NonProperStrand	31	chr4	122970392	122970449	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-8.7401
chr4	32827439	32828000	protein_coding	Mdn1	exon	ENSMUSG00000058006	ProperStrand	184	chr17	13112457	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	2	-4.4449
chr10	82211884	82211914	protein_coding	Nfyb	utr3	ENSMUSG00000020248	ProperStrand	25	chr1	95582417	95582996	protein_coding	Bok	utr5	ENSMUSG00000026278	ProperStrand	7	1	-20.1995
chr2	130103437	130103500	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	chr5	147646749	147646849	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	1	-2.9168
chr5	136673671	136673687	protein_coding	Prkrip1	exon	ENSMUSG00000039737	NonProperStrand	30	chr16	23111690	23111719	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.0878
chr2	4636292	4636372	LTR	MLT1B	MaLR	chr2MLT1B4636229	ProperStrand	1	chr2	4636443	4636533	SINE	B3	B2	chr2B34636388	ProperStrand	1	1	-inf
chr17	35972824	35972920	protein_coding	Tubb5	exon	ENSMUSG00000001525	ProperStrand	624	chr1	162968447	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-1.8027
chr15	76006100	76006140	protein_coding	Plec	exon	ENSMUSG00000022565	ProperStrand	186	chr9	114472236	114472336	protein_coding	Trim71	utr5	ENSMUSG00000079259	ProperStrand	162	1	-9.0530
chr7	28146782	28146798	protein_coding	Spnb4	exon	ENSMUSG00000011751	NonProperStrand	84	chr2	26203131	26203147	protein_coding	Gpsm1	utr3	ENSMUSG00000026930	ProperStrand	93	1	-11.7566
chr2	90235285	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	63389602	63389618	protein_coding	Tnfsf15	utr3	ENSMUSG00000050395	NonProperStrand	121	2	-5.4229
chr7	135121687	135124768	protein_coding	Fus	exon	ENSMUSG00000030795	ProperStrand	162	chr4	131908687	131908771	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	7	-4.6549
chrX	8911845	8911865	LTR	RMER20B	ERVK	chrXRMER20B8911600	NonProperStrand	2	chr16	23110828	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr7	125267834	125267888	protein_coding	Arl6ip1	intron	ENSMUSG00000030654	ProperStrand	57	chrX	113862531	113862570	snoRNA	ENSMUSG00000088518_SNORA9	.	ENSMUSG00000088518	ProperStrand	280	1	-10.3288
chr1	87436899	87436989	pseudogene	Gm7592	.	ENSMUSG00000090186	NonProperStrand	1	chr1	85309545	85309635	pseudogene	Gm2619	.	ENSMUSG00000091199	NonProperStrand	1	1	-inf
chr17	39985194	39985293	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr13	22023036	22023056	tRNA	tRNA983-MetCAT	.	648149	ProperStrand	32	3	-16.2708
chr2	31907316	31907652	processed_transcript	Gm16534	.	ENSMUSG00000090157	ProperStrand	2	chr19	8798740	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-12.1939
chr11	6428059	6428169	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr5	111121085	111121198	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	24	-9.8974
chr7	105362748	105362764	protein_coding	Acer3	utr3	ENSMUSG00000030760	ProperStrand	1	chr18	75160710	75160776	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	1	-inf
chr2	91762796	91762812	protein_coding	Chrm4	intron	ENSMUSG00000040495	ProperStrand	6	chr7	116663633	116663756	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-7.0045
chr11	78768604	78768621	protein_coding	Nos2	intron	ENSMUSG00000020826	NonProperStrand	5	chr11	69483191	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-7.3324
chr11	29446720	29446788	protein_coding	Rps27a	exon	ENSMUSG00000020460	ProperStrand	47	chr3	82816758	82816774	protein_coding	Fgg	exon	ENSMUSG00000033860	NonProperStrand	321	1	-10.4445
chr17	85152527	85152820	protein_coding	Lrpprc	exon	ENSMUSG00000024120	ProperStrand	98	chr19	41313258	41313303	protein_coding	Tm9sf3	exon	ENSMUSG00000025016	ProperStrand	21	1	-14.4523
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr8	32260335	32260431	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-0.7693
chr11	48615703	48615758	protein_coding-noncoding	Gnb2l1	utr5	ENSMUSG00000020372	ProperStrand	21	chr1	42755254	42755270	protein_coding	Pou3f3	exon	ENSMUSG00000045515	NonProperStrand	117	1	-14.0986
chr2	60634203	60634222	protein_coding	Rbms1	intron	ENSMUSG00000026970	NonProperStrand	5	chr12	60774056	60774111	snoRNA	ENSMUSG00000077603_SNORA3	.	ENSMUSG00000077603	ProperStrand	185	1	-16.1911
chr6	93756811	93756832	protein_coding	Magi1	intron	ENSMUSG00000045095	NonProperStrand	47	chr7	118219575	118219674	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	4	-14.6909
chr2	148022207	148022223	LTR	MTC	MaLR	chr2MTC148021852	ProperStrand	8	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-11.8681
chr19	8800377	8800457	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	chr11	69481389	69481479	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	NonProperStrand	24	1	-5.2834
chr11	12207122	12209707	protein_coding	Cobl	exon	ENSMUSG00000020173	NonProperStrand	9	chr19	8963087	8963165	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	2	-20.8465
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr11	4689687	4689752	protein_coding	Nf2	exon	ENSMUSG00000009073	ProperStrand	72	1	-7.6105
chr4	137077372	137077718	protein_coding	Hspg2	exon	ENSMUSG00000028763	NonProperStrand	18	chr14	33005139	33005225	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	NonProperStrand	13	1	-18.8210
mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr4	128867196	128867212	protein_coding	Yars	exon	ENSMUSG00000028811	ProperStrand	131	1	-4.3924
chr7	135898832	135901279	protein_coding	Sec23ip	exon	ENSMUSG00000055319	ProperStrand	27	chr7	29136535	29136615	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.7994
chr2	69193630	69193671	LINE	L1Md_F2	L1	chr2L1Md_F269191897	ProperStrand	54	chr11	103059065	103059081	protein_coding	Fmnl1	exon	ENSMUSG00000055805	ProperStrand	26	1	-15.2089
chr10	75503920	75503969	protein_coding	Zfp280b	utr3	ENSMUSG00000049764	ProperStrand	25	chr14	76247753	76247843	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-5.8745
chr9	64981512	64981529	protein_coding	Igdcc4	exon	ENSMUSG00000032816	NonProperStrand	36	chr15	98350157	98350272	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-5.7571
chr11	76265854	76265881	protein_coding	Abr	exon	ENSMUSG00000017631	ProperStrand	33	chr19	8799606	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-7.9616
chr16	17130386	17130474	protein_coding	Sdf2l1	utr3	ENSMUSG00000022769	ProperStrand	9	chr19	8799057	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	6	-20.0531
chr1	44049237	44056547	protein_coding	Tpp2	exon	ENSMUSG00000041763	ProperStrand	22	chr1	162965532	162965569	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.1855
chr17	35379672	35379697	protein_coding	Ddx39b	utr5	ENSMUSG00000019432	ProperStrand	119	chr15	98350211	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-3.4715
chr10	12141404	12141463	protein_coding	Utrn	exon	ENSMUSG00000019820	ProperStrand	69	chr7	109149271	109149287	protein_coding	Numa1	exon	ENSMUSG00000066306	NonProperStrand	171	1	-10.9306
chr9	108208775	108208869	protein_coding	Rhoa	utr5	ENSMUSG00000007815	ProperStrand	45	chr4	131908356	131908413	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.8531
chr16	57391758	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr17	17097506	17097606	protein_coding	BC002059	intron	ENSMUSG00000060149	ProperStrand	10	2	-18.0987
chr15	102628404	102628494	SINE	ID_B1	B4	chr15ID_B1102628318	ProperStrand	1	chr13	113090474	113090564	protein_coding	Ankrd55	intron	ENSMUSG00000049985	ProperStrand	1	1	-inf
chr17	4082439	4082517	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr9	63868722	63868739	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	1	-5.2874
chr19	10059076	10059166	protein_coding	Fth1	exon	ENSMUSG00000024661	ProperStrand	75	chr2	158185576	158185656	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-6.0457
chr2	48099057	48099147	lincRNA	Gm13481	intron	ENSMUSG00000086353	NonProperStrand	36	chr9	57443681	57443761	protein_coding	Ulk3	utr3	ENSMUSG00000032308	ProperStrand	9	1	-18.2601
chr12	98609220	98609240	LINE	L1M2	L1	chr12L1M298609126	NonProperStrand	1	chr1	72871131	72871199	protein_coding	Igfbp2	utr5	ENSMUSG00000039323	ProperStrand	406	1	-inf
chr11	79987895	79987912	antisense	Gm11206	.	ENSMUSG00000086507	ProperStrand	8	chr7	116663665	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-6.3908
chr8	73174431	73174521	protein_coding	Pgpep1	utr3	ENSMUSG00000056204	ProperStrand	12	chr2	32818807	32818887	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-8.7091
chr11	51129826	51129916	protein_coding	Col23a1	intron	ENSMUSG00000063564	NonProperStrand	8	chr11	51348503	51348593	protein_coding	Col23a1	intron	ENSMUSG00000063564	ProperStrand	16	1	-19.1029
chr1	182499157	182499192	protein_coding	Parp1	utr5	ENSMUSG00000026496	ProperStrand	227	chr6	122539275	122539294	protein_coding	Apobec1	intron	ENSMUSG00000040613	ProperStrand	2	1	-18.4750
chr4	140121137	140121153	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	1	-8.1948
chr5	122822624	122823968	protein_coding	Gpn3	exon	ENSMUSG00000029464	ProperStrand	19	chr11	97642956	97643080	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	11	-inf
chr15	96827291	96827391	protein_coding	Slc38a4	utr3	ENSMUSG00000022464	ProperStrand	139	chr1	162967513	162967551	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-2.0162
chr16	30362721	30362815	protein_coding	Atp13a3	exon	ENSMUSG00000022533	ProperStrand	45	chr4	131908688	131908789	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-4.7431
chrX	71533839	71534003	protein_coding	Taz	exon	ENSMUSG00000009995	ProperStrand	59	chr17	35299565	35299642	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-4.8096
chr4	122924415	122924432	protein_coding	Heyl	utr3	ENSMUSG00000032744	ProperStrand	31	chr10	23505152	23505214	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.2459
chr11	69550304	69550393	protein_coding	Polr2a	exon	ENSMUSG00000005198	NonProperStrand	10	chr16	11144188	11144278	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	2	-20.0239
chr12	111930879	111930990	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr5	130295415	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	17	-19.5712
chr2	170696365	170696382	protein_coding	Dok5	exon	ENSMUSG00000027560	NonProperStrand	4	chr11	97642952	97643004	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-7.8635
chr19	18128622	18128639	SINE	B3	B2	chr19B318128551	NonProperStrand	24	chr15	79908932	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-7.2930
chr11	121170216	121170267	protein_coding	Foxk2	utr3	ENSMUSG00000039275	ProperStrand	38	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.5894
chr11	97190086	97190186	protein_coding	Mrpl45	utr3	ENSMUSG00000018882	ProperStrand	12	chr1	88247742	88247799	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-8.3246
chr4	145280672	145280738	protein_coding	Gm13242	intron	ENSMUSG00000058186	ProperStrand	6	chr9	15118519	15118552	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	1	-14.1014
chr9	96264727	96264777	protein_coding	Atp1b3	utr5	ENSMUSG00000032412	ProperStrand	20	chr11	97397970	97397987	protein_coding	Srcin1	intron	ENSMUSG00000038453	ProperStrand	29	1	-16.9994
chr13	9833563	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr10	60561751	60561851	protein_coding	Sgpl1	utr3	ENSMUSG00000020097	ProperStrand	34	1	-6.0677
chr7	111374130	111374230	protein_coding	Trim6	exon	ENSMUSG00000072244	ProperStrand	40	chr16	23110962	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.7072
chr11	72695721	72695738	protein_coding	Zzef1	intron	ENSMUSG00000055670	ProperStrand	48	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-5.6362
chr16	9585345	9612667	protein_coding	Grin2a	exon	ENSMUSG00000059003	ProperStrand	10	chr18	35714206	35714255	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-6.9619
chr13	97251205	97251272	protein_coding	Polk	utr3	ENSMUSG00000021668	ProperStrand	16	chr16	23110829	23110917	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-3.6512
chr7	116663665	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	chr12	110884341	110884409	snoRNA	ENSMUSG00000084691_SNORD113	.	ENSMUSG00000084691	ProperStrand	23	1	-4.2677
chr10	120415111	120415185	protein_coding	Lemd3	exon	ENSMUSG00000048661	ProperStrand	32	chr11	48616656	48616706	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	1	-10.6141
chr5	137815411	137815445	protein_coding	Ephb4	utr3	ENSMUSG00000029710	ProperStrand	49	chr14	55476645	55476661	protein_coding	Homez	exon	ENSMUSG00000057156	NonProperStrand	127	1	-12.2172
chr13	27513701	27513781	LINE	L1Md_F2	L1	chr13L1Md_F227513631	ProperStrand	1	chr13	27513487	27513577	LINE	Lx9	L1	chr13Lx927513480	NonProperStrand	1	1	-inf
chr5	54389950	54389967	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	chr15	79908957	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	2	-5.3187
chr5	93319732	93319750	protein_coding	Shroom3	intron	ENSMUSG00000029381	NonProperStrand	7	chr9	72465234	72465259	protein_coding	Rfx7	exon	ENSMUSG00000037674	ProperStrand	20	1	-19.1455
chr7	35000272	35000372	protein_coding	Gpi1	intron	ENSMUSG00000036427	ProperStrand	288	chr1	9932550	9932604	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-4.6547
chr16	34986602	34986618	protein_coding	Mylk	exon	ENSMUSG00000022836	NonProperStrand	56	chr11	69481383	69481473	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-5.6946
chr9	119021246	119021262	protein_coding	Dlec1	exon	ENSMUSG00000038060	ProperStrand	17	chr1	162965530	162965588	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.6984
chr4	136107894	136107912	protein_coding	Kdm1a	exon	ENSMUSG00000036940	ProperStrand	83	chr2	130103751	130103796	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-7.8232
chr5	74489204	74489284	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr19	59375068	59375158	protein_coding	Pdzd8	exon	ENSMUSG00000074746	ProperStrand	42	1	-6.3249
chr8	87366676	87366909	protein_coding	Calr	exon	ENSMUSG00000003814	ProperStrand	232	chr18	73693113	73693138	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-2.9808
chr15	72376666	72376682	protein_coding	Kcnk9	exon	ENSMUSG00000036760	NonProperStrand	42	chr15	79908956	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-6.1743
chr17	80605307	80606566	protein_coding	Srsf7	exon	ENSMUSG00000024097	ProperStrand	31	chr10	23505258	23505279	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.2459
chr14	56159295	56159314	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	chr7	117189931	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-2.6040
chr3	37543032	37543048	protein_coding	Spry1	utr3	ENSMUSG00000037211	NonProperStrand	5	chr12	113838013	113838036	protein_coding	Inf2	intron	ENSMUSG00000037679	NonProperStrand	4	1	-20.9004
chr3	108189588	108190203	protein_coding	Psrc1	exon	ENSMUSG00000068744	ProperStrand	38	chr11	6428100	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.0389
chr3	85943014	85943079	protein_coding	Rps3a	exon	ENSMUSG00000028081	ProperStrand	177	chr5	130300465	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-0.9004
chr2	131122333	131122395	protein_coding	Pank2	utr3	ENSMUSG00000037514	ProperStrand	14	chr9	122170515	122170532	protein_coding	Ano10	exon	ENSMUSG00000037949	ProperStrand	16	1	-19.1867
chr6	134097815	134097831	protein_coding	Etv6	intron	ENSMUSG00000030199	NonProperStrand	77	chr1	88247816	88247835	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-4.6159
chr3	95648028	95648118	protein_coding-noncoding	Prpf3	utr3	ENSMUSG00000015748	ProperStrand	1	chr3	95648248	95648328	protein_coding	Prpf3	intron	ENSMUSG00000015748	ProperStrand	29	1	-inf
chrX	83438217	83438234	protein_coding	Nr0b1	exon	ENSMUSG00000025056	ProperStrand	37	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-7.5549
chr4	106258431	106258510	protein_coding	Dhcr24	exon	ENSMUSG00000034926	ProperStrand	94	chr11	77995192	77995255	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-5.3035
chr15	62191536	62191554	lincRNA	Pvt1	intron	ENSMUSG00000072566	ProperStrand	51	chr17	47730617	47730667	protein_coding	Ccnd3	exon	ENSMUSG00000034165	ProperStrand	58	1	-13.7136
chr13	30338191	30338207	protein_coding	Mboat1	utr3	ENSMUSG00000038732	NonProperStrand	148	chr10	127580484	127580582	protein_coding	Rbms2	exon	ENSMUSG00000040043	ProperStrand	26	1	-13.1915
chr17	35299518	35299634	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	chr16	56035872	56035989	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	2	-2.0956
chr5	130339120	130339210	protein_coding	Sumf2	utr3	ENSMUSG00000025538	ProperStrand	20	chr16	23111416	23111496	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.0472
chr14	59835874	59855365	protein_coding	Rcbtb1	intron	ENSMUSG00000035469	ProperStrand	39	chr4	56910497	56910629	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	2	-11.2230
chr17	35291743	35291771	protein_coding	Prrc2a	exon	ENSMUSG00000024393	ProperStrand	315	chr7	91740519	91740536	protein_coding	Fah	intron	ENSMUSG00000030630	NonProperStrand	4	1	-15.6567
chr9	40611211	40611227	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr4	3758853	3758926	protein_coding	Rps20	utr3	ENSMUSG00000028234	ProperStrand	71	3	-17.5901
chr2	79132657	79132674	protein_coding-noncoding	Itga4	utr5	ENSMUSG00000027009	NonProperStrand	118	chr4	122968597	122968710	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-4.9601
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr19	8799025	8799054	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-1.5942
chr8	23486696	23486786	protein_coding	Slc25a15	utr3	ENSMUSG00000031482	ProperStrand	13	chr7	148634702	148634782	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-7.0006
chr4	108278918	108278934	protein_coding	Orc1	exon	ENSMUSG00000028587	ProperStrand	161	chr11	94853210	94853304	protein_coding	Ppp1r9b	exon	ENSMUSG00000038976	ProperStrand	27	1	-12.9486
chr2	130109497	130109513	protein_coding	Idh3b	exon	ENSMUSG00000027406	ProperStrand	146	chr7	5062341	5062360	protein_coding	Rfpl4	exon	ENSMUSG00000035191	NonProperStrand	27	1	-13.1439
chr16	8922894	8922984	LINE	Lx8	L1	chr16Lx88922861	ProperStrand	1	chr16	8923069	8923149	SINE	B3	B2	chr16B38923026	ProperStrand	1	1	-inf
chr3	103548097	103548164	protein_coding	Hipk1	exon	ENSMUSG00000008730	ProperStrand	23	chr4	117884658	117884748	protein_coding	Ptprf	exon	ENSMUSG00000033295	ProperStrand	337	1	-11.7969
chrX	91435165	91435182	protein_coding	Eif2s3x	utr3	ENSMUSG00000035150	NonProperStrand	83	chr17	35299507	35299599	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-4.1581
chr2	138188029	138188045	protein_coding	Btbd3	intron	ENSMUSG00000062098	NonProperStrand	121	chr5	121655029	121655062	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.4917
chr12	101015827	101015844	protein_coding	2610021K21Rik	intron	ENSMUSG00000021176	ProperStrand	12	chr10	23505219	23505235	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.9771
chr8	91272435	91272452	protein_coding	Cyld	utr3	ENSMUSG00000036712	ProperStrand	3	chr2	26493366	26493466	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-9.9740
chr11	62416464	62416495	lincRNA	2410006H16Rik	exon	ENSMUSG00000086841	ProperStrand	525	chr16	72800514	72800532	protein_coding	Robo1	intron	ENSMUSG00000022883	NonProperStrand	188	1	-6.6988
chr16	4937463	4937566	protein_coding	Mgrn1	utr3	ENSMUSG00000022517	ProperStrand	14	chr3	153575089	153575107	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	1	-11.4529
chr11	97372833	97372850	protein_coding	Srcin1	utr3	ENSMUSG00000038453	NonProperStrand	21	chr15	79913288	79913332	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-5.6139
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr2	166890503	166890556	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-2.4891
chr10	62894011	62894083	protein_coding	Ctnna3	intron	ENSMUSG00000060843	NonProperStrand	22	chr19	8798494	8798553	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-7.2021
chr15	34370540	34370579	protein_coding-noncoding	Rpl30	utr3	ENSMUSG00000058600	ProperStrand	30	chr13	96100645	96100693	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	2	-14.9885
chr10	58901362	58901379	protein_coding	Oit3	exon	ENSMUSG00000009654	NonProperStrand	11	chr9	80084780	80084798	protein_coding	Myo6	intron	ENSMUSG00000033577	ProperStrand	29	1	-18.3220
chr13	99625488	99626898	protein_coding	Tnpo1	exon	ENSMUSG00000009470	ProperStrand	56	chr10	3211472	3211902	protein_coding	Cnksr3	exon	ENSMUSG00000015202	ProperStrand	22	1	-15.4816
chr12	36872702	36872792	protein_coding	Bzw2	intron	ENSMUSG00000020547	ProperStrand	29	chr16	23110456	23110536	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	6	-20.5996
chr13	41120995	41121011	protein_coding	Mak	utr3	ENSMUSG00000021363	NonProperStrand	3	chr16	23110967	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr15	96521614	96521753	protein_coding	Slc38a2	exon	ENSMUSG00000022462	ProperStrand	133	chr15	34370586	34370676	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-3.8552
chr16	36089868	36089942	protein_coding	Ccdc58	intron	ENSMUSG00000075229	ProperStrand	18	chr6	94776857	94776875	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	1	-11.5419
chr19	38869531	38869547	protein_coding	Noc3l	exon	ENSMUSG00000024999	NonProperStrand	149	chr19	8963026	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-0.9398
chr3	122842692	122842710	protein_coding	Synpo2	intron	ENSMUSG00000050315	NonProperStrand	6	chr11	6428077	6428156	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	NonProperStrand	91	2	-18.9095
chr12	114310291	114310307	protein_coding	Pacs2	utr3	ENSMUSG00000021143	ProperStrand	14	chr11	69483189	69483279	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-5.1730
chr9	66794559	66794649	protein_coding	Rps27l	intron	ENSMUSG00000036781	ProperStrand	11	chr5	130300448	130300528	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-5.7288
chr7	52397373	52397453	protein_coding	Aldh16a1	exon	ENSMUSG00000007833	NonProperStrand	1	chr15	102018086	102018176	protein_coding	Csad	intron	ENSMUSG00000023044	NonProperStrand	2	1	-inf
chr3	32643776	32643831	protein_coding	Ndufb5	exon	ENSMUSG00000027673	ProperStrand	3	chr7	117189931	117190021	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-9.5269
chr1	162286088	162286104	protein_coding	Rabgap1l	intron	ENSMUSG00000026721	ProperStrand	44	chr11	6428092	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.7630
chr7	52358305	52358350	protein_coding	Fcgrt	intron	ENSMUSG00000003420	ProperStrand	4	chr7	116663711	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-7.9103
chr8	77742558	77742574	protein_coding	Rasd2	exon	ENSMUSG00000034472	NonProperStrand	237	chr7	51505837	51505875	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	1	-5.8929
chr15	82725599	82725636	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	chr2	158182180	158182279	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	3	-3.0727
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr9	44436794	44438110	protein_coding	Ddx6	exon	ENSMUSG00000032097	ProperStrand	59	1	-8.0080
chrX	148705324	148705401	protein_coding	Kdm5c	intron	ENSMUSG00000025332	ProperStrand	139	chr5	75593787	75593804	protein_coding	Pdgfra	utr3	ENSMUSG00000029231	ProperStrand	11	4	-18.7589
chr8	12963170	12963238	protein_coding	Mcf2l	exon	ENSMUSG00000031442	ProperStrand	14	chr2	65376282	65376298	protein_coding	Scn3a	intron	ENSMUSG00000057182	ProperStrand	26	1	-17.8919
chr11	4219700	4219765	SINE	RSINE1	B4	chr11RSINE14219685	NonProperStrand	5	chr16	23110909	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-inf
chrX	6951750	6951766	protein_coding	Usp27x	exon	ENSMUSG00000046269	ProperStrand	5	chr4	131865866	131865901	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-6.5022
chr16	13332970	13332987	protein_coding	Mkl2	utr3	ENSMUSG00000009569	ProperStrand	55	chr15	98356846	98356901	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	2	-12.6639
chr2	90235290	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	149961498	149961521	lincRNA	5730422E09Rik	intron	ENSMUSG00000086085	NonProperStrand	9	1	-8.2671
chr5	110211308	110211398	LTR	ORR1B1	MaLR	chr5ORR1B1110211198	ProperStrand	1	chr16	23110873	23110953	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr5	138443237	138443257	LTR	MMETn-int	ERVK	chr5MMETn-int138442512	NonProperStrand	1	chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	1	-inf
chr6	59481404	59481421	LINE	L1Md_F2	L1	chr6L1Md_F259481321	ProperStrand	1	chr17	13184998	13185015	protein_coding	Wtap	utr5	ENSMUSG00000060475	ProperStrand	119	1	-inf
chr11	97190086	97190186	protein_coding	Mrpl45	utr3	ENSMUSG00000018882	ProperStrand	12	chr19	8800085	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	6	-18.9478
chr1	155067600	155075944	protein_coding	Lamc1	exon	ENSMUSG00000026478	ProperStrand	239	chr4	131908689	131908803	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-1.3355
chr8	113659526	113659591	protein_coding	Pdpr	utr3	ENSMUSG00000033624	ProperStrand	49	chr11	62416970	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	7	-inf
chr8	66704297	66704313	LTR	MTD	MaLR	chr8MTD66704270	ProperStrand	12	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-11.0125
chr1	55054035	55054897	protein_coding	Sf3b1	exon	ENSMUSG00000025982	ProperStrand	158	chr2	26493383	26493487	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-2.0444
chr13	9833550	9833604	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr2	24657072	24657597	protein_coding	Ehmt1	exon	ENSMUSG00000036893	ProperStrand	45	1	-5.5148
chr2	103609765	103611893	protein_coding	Caprin1	exon	ENSMUSG00000027184	ProperStrand	145	chr3	108357255	108357445	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	17	-21.1803
chr6	122663596	122663983	protein_coding	Nanog	utr3	ENSMUSG00000012396	ProperStrand	66	chr14	33005109	33005209	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	2	-6.4412
chr11	116535465	116535534	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr1	88253211	88253233	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	1	-0.8144
chr2	69588001	69588101	protein_coding	Ppig	exon	ENSMUSG00000042133	ProperStrand	13	chr16	23110917	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.3283
chr19	6339403	6339482	protein_coding	Men1	exon	ENSMUSG00000024947	ProperStrand	24	chr17	35299548	35299638	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-6.5813
chr12	84713497	84713515	LINE	L1MB3	L1	chr12L1MB384713406	ProperStrand	1	chr11	97642952	97642990	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-inf
chr5	121902274	121902290	protein_coding	Erp29	exon	ENSMUSG00000029616	ProperStrand	33	chr18	33954815	33954922	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-4.6356
chr18	10052131	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr2	86138158	86138174	protein_coding	Olfr1052	exon	ENSMUSG00000047149	NonProperStrand	119	1	-7.4345
chr17	39979944	39980021	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr17	34042580	34042596	lincRNA	BC033916	exon	ENSMUSG00000092349	ProperStrand	19	1	-9.5425
chr17	13814793	13814893	protein_coding	Tcte2	intron	ENSMUSG00000038347	ProperStrand	21	chr16	23111757	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.7491
chr2	89368463	89368480	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	chr10	110918549	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	3	-3.3652
chr1	64779794	64779849	protein_coding	Fzd5	utr3	ENSMUSG00000045005	ProperStrand	175	chr4	139032107	139032197	protein_coding	Ubr4	exon	ENSMUSG00000066036	ProperStrand	304	1	-7.9213
chr2	90235303	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr18	75161426	75161684	protein_coding	Rpl17	exon	ENSMUSG00000062328	ProperStrand	90	1	-3.6990
chr16	20865120	20865210	LTR	MTC-int	MaLR	chr16MTC-int20864314	NonProperStrand	1	chr17	45316426	45316506	LTR	ORR1A2-int	MaLR	chr17ORR1A2-int45315528	NonProperStrand	1	1	-inf
chr1	138844728	138844744	protein_coding	Nr5a2	intron	ENSMUSG00000026398	ProperStrand	43	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-11.1000
chr5	138227334	138227370	protein_coding	Mepce	utr5	ENSMUSG00000029726	ProperStrand	18	chr8	73419657	73419757	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	8	-21.7990
chr13	3892696	3892714	protein_coding	Net1	utr5	ENSMUSG00000021215	ProperStrand	32	chr3	85942725	85942780	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	1	-10.9870
chr2	162980472	162980562	lincRNA	Gm14254	intron	ENSMUSG00000086036	NonProperStrand	1	chr3	123283974	123284054	protein_coding	Ndst3	intron	ENSMUSG00000027977	NonProperStrand	16	1	-inf
chr2	63936036	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr11	77996558	77996602	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-1.2492
chr9	108400780	108401798	protein_coding	Usp19	exon	ENSMUSG00000006676	ProperStrand	57	chr9	15118323	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	3	-8.8472
chr1	173286857	173286957	protein_coding	Pfdn2	exon	ENSMUSG00000006412	ProperStrand	9	chr4	131908236	131908297	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.8019
chr18	46949598	46949623	protein_coding	Ap3s1	exon	ENSMUSG00000024480	ProperStrand	8	chrX	71517909	71517954	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-10.6601
chr11	95630257	95630347	protein_coding	Zfp652	utr3	ENSMUSG00000075595	ProperStrand	48	chr5	74489591	74489671	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-4.1981
chr2	29757720	29757805	protein_coding	Odf2	exon	ENSMUSG00000026790	ProperStrand	58	chr11	106362339	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-5.9091
chrX	34667269	34667285	protein_coding	Nkap	exon	ENSMUSG00000016409	NonProperStrand	133	chr17	81013440	81013458	protein_coding	Map4k3	intron	ENSMUSG00000024242	NonProperStrand	3	1	-18.4084
chr16	94361799	94361889	protein_coding	Hlcs	intron	ENSMUSG00000040820	ProperStrand	22	chr11	120784463	120784543	protein_coding	Ccdc57	intron	ENSMUSG00000048445	NonProperStrand	5	1	-19.2616
chr17	13112453	13112585	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	chr15	79908928	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	11	-2.3118
chr2	69811595	69811663	protein_coding	Ubr3	exon	ENSMUSG00000044308	ProperStrand	62	chr2	26493366	26493432	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-3.6816
chr6	122678344	122679365	protein_coding	Slc2a3	utr3	ENSMUSG00000003153	ProperStrand	682	chr15	79908931	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	6	-8.9315
chr17	79250701	79250794	pseudogene	Gm6548	.	ENSMUSG00000091549	ProperStrand	33	chr9	15118286	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-7.6533
chr6	73099163	73099179	protein_coding	Dnahc6	exon	ENSMUSG00000052861	NonProperStrand	2	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-10.4671
chr15	82980094	82980225	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr4	131908687	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	24	-0.8430
chr17	14451583	14451673	protein_coding	Smoc2	intron	ENSMUSG00000023886	NonProperStrand	6	chr10	110918554	110918634	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-13.1372
chr2	28324355	28324372	protein_coding	Mrps2	exon	ENSMUSG00000035772	NonProperStrand	47	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-6.3141
chr19	10290977	10291129	protein_coding	Gm98	exon	ENSMUSG00000036098	ProperStrand	26	chr17	13112530	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	2	-10.1226
chr9	21934462	21934478	protein_coding	Acp5	exon	ENSMUSG00000001348	ProperStrand	66	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.6223
chr17	51951394	51951463	protein_coding	Satb1	utr5	ENSMUSG00000023927	ProperStrand	62	chr1	162965980	162966006	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-6.0254
chr10	77863444	77863538	protein_coding	Rrp1	utr3	ENSMUSG00000061032	ProperStrand	177	chr10	23505152	23505193	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-1.5514
chr13	23837346	23837388	protein_coding	Hist1h3c	utr5	ENSMUSG00000069310	ProperStrand	26	chr1	24621511	24621562	protein_coding	Gm10925	utr5	ENSMUSG00000090378	ProperStrand	320	4	-19.4461
chr7	5062341	5062361	protein_coding	Rfpl4	exon	ENSMUSG00000035191	NonProperStrand	27	chr17	46917433	46918797	protein_coding	Rpl7l1	exon	ENSMUSG00000063888	ProperStrand	37	2	-inf
chr9	106383547	106384116	protein_coding	Rrp9	exon	ENSMUSG00000041506	ProperStrand	32	chr2	166890527	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-8.8194
chr9	44166294	44166384	protein_coding	Vps11	exon	ENSMUSG00000032127	ProperStrand	19	chr8	32260330	32260410	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-6.9002
chr4	133801679	133801695	lincRNA	E130218I03Rik	exon	ENSMUSG00000086322	NonProperStrand	43	chr17	88036148	88036207	protein_coding	Epcam	utr5	ENSMUSG00000045394	ProperStrand	43	1	-14.6677
chr8	108659944	108660028	protein_coding	Esrp2	intron	ENSMUSG00000084128	ProperStrand	6	chr4	131866157	131866247	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	5	-19.6141
chrX	49741298	49741371	protein_coding	Gpc3	exon	ENSMUSG00000055653	ProperStrand	43	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-2.3110
chr6	124781473	124781549	protein_coding-noncoding	Cdca3	utr5	ENSMUSG00000023505	ProperStrand	4	chr14	76247711	76247775	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-15.8899
chr13	47198501	47198586	protein_coding	Dek	intron	ENSMUSG00000021377	ProperStrand	36	chr4	131865951	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-6.8933
chr5	135630310	135632269	protein_coding	Tbl2	exon	ENSMUSG00000005374	ProperStrand	28	chr19	8963084	8963164	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.6314
chr3	96364058	96364138	protein_coding-noncoding	Txnip	utr5	ENSMUSG00000038393	ProperStrand	1	chr7	31353989	31354079	protein_coding	Wbp7	utr3	ENSMUSG00000006307	ProperStrand	180	1	-inf
chr1	173433177	173433292	protein_coding	B930036N10Rik	utr3	ENSMUSG00000091993	ProperStrand	150	chr9	40612124	40612164	snoRNA	ENSMUSG00000075924_Snord14d	.	ENSMUSG00000075924	ProperStrand	131	1	-9.9072
chr5	89182226	89182242	protein_coding	Mob1b	exon	ENSMUSG00000006262	NonProperStrand	2	chr6	71832629	71832687	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-13.0331
chr16	27446669	27446685	protein_coding	Ccdc50	utr3	ENSMUSG00000038127	ProperStrand	10	chr12	17552965	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-8.6970
chr19	3894080	3894170	protein_coding	Chka	utr3	ENSMUSG00000024843	ProperStrand	17	chr16	23110913	23110993	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.8783
chr7	140955173	140955198	protein_coding	Dhx32	intron	ENSMUSG00000030986	ProperStrand	100	chr10	90581033	90581069	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-3.8378
chr2	90235313	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	43919824	43919840	protein_coding	Rnf26	exon	ENSMUSG00000053128	NonProperStrand	18	1	-6.8363
chr9	120037898	120037991	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	chr7	52382752	52382830	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	4	-1.0986
chr14	66342756	66342772	protein_coding	Scara5	intron	ENSMUSG00000022032	ProperStrand	30	chr7	117190019	117190045	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.6386
chr5	130458917	130458935	protein_coding	Vkorc1l1	utr3	ENSMUSG00000066735	ProperStrand	8	chr4	131908236	131908318	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-8.5021
chr8	3453315	3453337	protein_coding	Arhgef18	exon	ENSMUSG00000004568	ProperStrand	26	chr11	6428054	6428154	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	4	-15.1665
chr11	118900007	118900024	protein_coding	Cbx8	exon	ENSMUSG00000025578	ProperStrand	95	chr13	51743572	51743662	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-5.9529
chr10	103161287	103161377	LINE	Lx8	L1	chr10Lx8103160095	ProperStrand	1	chr10	103162057	103162137	LTR	MTC	MaLR	chr10MTC103161958	NonProperStrand	1	1	-inf
chr12	108871922	108871938	SINE	B4A	B4	chr12B4A108871776	ProperStrand	43	chr5	108334195	108334266	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	2	-8.9658
chr8	106876278	106876309	protein_coding	Gm9853	utr3	ENSMUSG00000051554	ProperStrand	25	chr16	23111764	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-11.6916
chr4	80232267	80232290	LINE	Lx2B	L1	chr4Lx2B80231973	ProperStrand	6	chr3	108357255	108357358	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	5	-19.1023
chr3	37123234	37123250	protein_coding	Il21	utr3	ENSMUSG00000027718	ProperStrand	2	chr16	23110852	23110942	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr11	97944428	97944518	protein_coding	Fbxl20	utr3	ENSMUSG00000020883	ProperStrand	23	chr17	24857716	24857796	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.0279
chr4	3762713	3762730	protein_coding	Rps20	utr5	ENSMUSG00000028234	ProperStrand	71	chr5	115983444	115983460	protein_coding	Pxn	intron	ENSMUSG00000029528	ProperStrand	171	1	-10.8732
chr2	119728959	119729049	protein_coding	Mga	exon	ENSMUSG00000033943	ProperStrand	180	chr8	32260335	32260373	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	3	-6.8128
chr4	116826726	116826757	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	chr18	74938044	74938144	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	ProperStrand	1022	1	-1.5970
chr11	97141723	97141813	protein_coding	Npepps	utr5	ENSMUSG00000001441	ProperStrand	30	chr2	29849184	29849375	protein_coding	Spna2	exon	ENSMUSG00000057738	ProperStrand	222	1	-12.0907
chr2	90420602	90420630	protein_coding	Ptprj	utr5	ENSMUSG00000025314	ProperStrand	29	chr16	23110964	23111005	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0921
chr9	119832797	119832862	protein_coding	Wdr48	intron	ENSMUSG00000032512	ProperStrand	16	chr5	100885321	100885338	protein_coding	Lin54	intron	ENSMUSG00000035310	ProperStrand	21	3	-20.5107
chr17	32259739	32261241	protein_coding	Notch3	exon	ENSMUSG00000038146	ProperStrand	181	chr9	39358287	39358304	protein_coding	Olfr958	exon	ENSMUSG00000050853	NonProperStrand	266	1	-8.1195
chr1	72272872	72272962	snRNA	ENSMUSG00000075752_U2	.	ENSMUSG00000075752	ProperStrand	535	chr12	112779206	112779270	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	15	-20.4072
chr3	136526736	136526753	protein_coding	Ppp3ca	intron	ENSMUSG00000028161	NonProperStrand	120	chr2	130101988	130102056	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-4.0285
chr9	72595224	72595324	protein_coding	Nedd4	utr3	ENSMUSG00000032216	ProperStrand	308	chr1	162965549	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-0.7651
chr9	61773361	61779987	protein_coding	Kif23	exon	ENSMUSG00000032254	ProperStrand	41	chr16	23110980	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-2.4460
chr2	57090809	57090826	protein_coding	Gpd2	utr5	ENSMUSG00000026827	ProperStrand	93	chr10	90360089	90360106	protein_coding	Anks1b	exon	ENSMUSG00000058589	ProperStrand	68	1	-12.1806
chr4	147295599	147297284	protein_coding	Plod1	exon	ENSMUSG00000019055	ProperStrand	8	chr5	121655017	121655107	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-12.6021
chr16	85280907	85280924	LINE	L1M5	L1	chr16L1M585280779	NonProperStrand	30	chr2	32563527	32563545	protein_coding	Cdk9	exon	ENSMUSG00000009555	NonProperStrand	49	1	-15.1341
chr1	20190753	20190770	protein_coding	Pkhd1	exon	ENSMUSG00000043760	NonProperStrand	49	chrX	132673816	132673833	protein_coding	Bex4	intron	ENSMUSG00000047844	NonProperStrand	70	1	-13.4152
chr11	74718931	74718976	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	chr1	162965981	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	5	-3.7534
chr2	44035357	44035447	protein_coding	Arhgap15	intron	ENSMUSG00000049744	NonProperStrand	10	chr2	44035606	44035695	protein_coding	Arhgap15	intron	ENSMUSG00000049744	ProperStrand	6	1	-19.4901
chr6	71554049	71554135	protein_coding	Kdm3a	exon	ENSMUSG00000053470	ProperStrand	41	chr7	29136611	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.0293
chr16	3317967	3318057	LINE	L1Md_F2	L1	chr16L1Md_F23316222	NonProperStrand	1	chr7	54442936	54443026	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	1	-inf
chr5	108332354	108332377	protein_coding	Rpl5	exon	ENSMUSG00000058558	ProperStrand	235	chr2	90758153	90758169	protein_coding	Ptpmt1	exon	ENSMUSG00000063235	NonProperStrand	6	1	-15.3344
chr3	88359894	88360618	protein_coding	Ubqln4	exon	ENSMUSG00000008604	ProperStrand	49	chr18	33954889	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	3	-9.5226
chr4	141673026	141673042	protein_coding	Kazn	exon	ENSMUSG00000040606	ProperStrand	123	chr19	8800418	8800477	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-2.2656
chr15	76005537	76005553	protein_coding	Plec	exon	ENSMUSG00000022565	ProperStrand	186	chr7	106996955	106997557	protein_coding	Spcs2	exon	ENSMUSG00000035227	ProperStrand	17	1	-13.6087
chr10	67558699	67558731	protein_coding	Arid5b	utr3	ENSMUSG00000019947	ProperStrand	43	chr5	110833743	110833776	protein_coding	Fbrsl1	intron	ENSMUSG00000043323	ProperStrand	131	1	-12.4184
chr8	109127440	109128272	protein_coding	Cdh1	exon	ENSMUSG00000000303	ProperStrand	283	chr16	16323855	16324068	protein_coding	Dnm1l	exon	ENSMUSG00000022789	NonProperStrand	38	1	-11.1256
chr7	112959031	112959410	protein_coding	Mrpl17	exon	ENSMUSG00000030879	ProperStrand	9	chr7	117189955	117190035	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-7.0617
chr11	22735762	22735862	protein_coding	Commd1	utr3	ENSMUSG00000051355	ProperStrand	36	chr3	123210854	123210890	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.9411
chr13	40885938	40886028	LTR	RMER17C	ERVK	chr13RMER17C40885844	NonProperStrand	1	chr13	40886076	40886156	LTR	RMER17C	ERVK	chr13RMER17C40886048	NonProperStrand	1	1	-inf
chr1	122016935	122016989	protein_coding	Dbi	intron	ENSMUSG00000026385	ProperStrand	8	chr11	69483153	69483229	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	5	-19.4839
chr4	131865418	131865516	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	chr7	52382234	52382315	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	2	-0.7585
chr5	111215435	111216196	protein_coding	Ulk1	exon	ENSMUSG00000029512	ProperStrand	92	chr17	35088957	35088975	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-5.0344
chr2	75500080	75500550	protein_coding	Hnrnpa3	exon	ENSMUSG00000059005	ProperStrand	289	chr6	115758051	115758131	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-2.5514
chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	chr8	13416896	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	2	-3.6141
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr2	26766798	26766854	snoRNA	ENSMUSG00000065258_SNORD24	.	ENSMUSG00000065258	ProperStrand	130	1	-7.3620
chr6	115742094	115742110	protein_coding	Cand2	exon	ENSMUSG00000030319	NonProperStrand	21	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-11.4950
chr13	9833551	9833675	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr2	41199972	41199989	protein_coding	Lrp1b	exon	ENSMUSG00000049252	ProperStrand	376	3	-4.7930
chr10	66509837	66509857	protein_coding	Reep3	intron	ENSMUSG00000019873	NonProperStrand	3	chr10	110918549	110918639	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-9.6547
chr14	101876664	101876680	protein_coding	Tbc1d4	intron	ENSMUSG00000033083	ProperStrand	6	chr7	116664804	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-11.6238
chr4	86891487	86891577	LTR	ORR1A2	MaLR	chr4ORR1A286891248	ProperStrand	1	chr11	95628809	95628899	protein_coding	Zfp652	utr3	ENSMUSG00000075595	NonProperStrand	8	1	-inf
chr8	96543602	96546756	protein_coding	Nudt21	exon	ENSMUSG00000031754	ProperStrand	33	chr16	23110834	23110875	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.8807
chr16	93862952	93866636	protein_coding	Morc3	exon	ENSMUSG00000039456	ProperStrand	24	chr11	102153259	102153279	protein_coding	Atxn7l3	exon	ENSMUSG00000059995	ProperStrand	24	1	-17.0397
chr2	146125209	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	chr5	121655017	121655153	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	5	-9.1970
chr4	25547924	25547940	protein_coding	Fut9	exon	ENSMUSG00000055373	NonProperStrand	4	chr10	23505261	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-6.2798
chr10	80507383	80507453	protein_coding	Sgta	utr3	ENSMUSG00000004937	ProperStrand	17	chrX	34622906	34622923	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-5.5847
chr9	66289767	66289852	protein_coding	Herc1	exon	ENSMUSG00000038664	ProperStrand	81	chr11	101284171	101284227	protein_coding	Aarsd1	intron	ENSMUSG00000075528	ProperStrand	30	9	-inf
chr11	62418014	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	chr4	3762227	3762279	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	3	-5.6158
chr9	62992379	62992395	protein_coding	Skor1	exon	ENSMUSG00000022245	NonProperStrand	70	chr7	117189908	117189943	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.0537
chr18	42435135	42435151	protein_coding	Rbm27	utr5	ENSMUSG00000024491	NonProperStrand	10	chr11	36818190	36818207	protein_coding	Odz2	intron	ENSMUSG00000049336	ProperStrand	106	1	-15.8351
chr16	54679541	54679559	LTR	MYSERV16_I-int	ERVK	chr16MYSERV16_I-int54679027	NonProperStrand	31	chr10	80644655	80644722	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-7.4135
chr2	59681034	59681067	protein_coding	Tanc1	exon	ENSMUSG00000035168	ProperStrand	80	chr11	69483193	69483259	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.9740
chrX	134975013	134975029	protein_coding	Il1rapl2	intron	ENSMUSG00000059203	NonProperStrand	23	chr11	62416599	62416653	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-7.0660
chr2	29731511	29731528	protein_coding	Cercam	exon	ENSMUSG00000039787	NonProperStrand	1	chr14	33005110	33005209	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-inf
chr2	75499980	75500070	protein_coding	Hnrnpa3	exon	ENSMUSG00000059005	ProperStrand	289	chr5	108336380	108336460	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-2.0426
chr2	172270204	172270220	protein_coding	2410001C21Rik	exon	ENSMUSG00000027502	NonProperStrand	54	chr5	143733730	143733788	protein_coding	Fscn1	utr3	ENSMUSG00000029581	ProperStrand	200	1	-11.1106
chr19	8800353	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	chr14	52829462	52829566	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	3	-0.8049
chr1	63225577	63225655	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	chr17	24665433	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	5	-1.9387
chr14	60998023	60998039	protein_coding	Fam123a	exon	ENSMUSG00000021986	ProperStrand	13	chr4	149020423	149020470	protein_coding	Clstn1	exon	ENSMUSG00000039953	ProperStrand	173	1	-14.3071
chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	chr5	115939528	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-2.9190
chr10	79321890	79321907	protein_coding	Ptbp1	exon	ENSMUSG00000006498	ProperStrand	129	chr11	121188774	121188874	protein_coding	Wdr45l	utr3	ENSMUSG00000025173	ProperStrand	8	1	-15.8814
chr4	43505757	43505847	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr14	56166922	56166969	protein_coding	Pck2	exon	ENSMUSG00000040618	ProperStrand	18	1	-5.3613
chr9	122761980	122762014	protein_coding	Zfp445	exon	ENSMUSG00000047036	ProperStrand	8	chr4	131908803	131908893	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.7736
chr17	59140241	59140276	protein_coding	Nudt12	utr3	ENSMUSG00000024228	ProperStrand	5	chr10	23505192	23505282	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-19.5878
chr19	3342522	3342567	protein_coding	Cpt1a	intron	ENSMUSG00000024900	ProperStrand	48	chr7	150717298	150717322	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-5.9449
chr4	97812275	97812291	protein_coding	Nfia	intron	ENSMUSG00000028565	NonProperStrand	74	chr11	106362640	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-6.9873
chr10	117596790	117601312	protein_coding	Mdm1	exon	ENSMUSG00000020212	ProperStrand	9	chr3	85942714	85942779	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	3	-21.7081
chr2	90235314	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	35384121	35384192	snoRNA	ENSMUSG00000065273_SNORD83	.	ENSMUSG00000065273	ProperStrand	244	3	-5.4016
chr11	120693630	120693648	protein_coding	Ccdc57	intron	ENSMUSG00000048445	ProperStrand	12	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.6729
chr17	13117225	13117275	protein_coding	Tcp1	exon	ENSMUSG00000068039	ProperStrand	116	chr12	106269356	106269445	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-2.9300
chr2	53003875	53003891	protein_coding	Prpf40a	exon	ENSMUSG00000061136	ProperStrand	129	chr9	64024528	64024567	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	1	-6.8423
chr8	119973023	119976106	protein_coding	4933407C03Rik	exon	ENSMUSG00000034390	ProperStrand	48	chr2	76616052	76616069	protein_coding	Ttn	exon	ENSMUSG00000051747	ProperStrand	66	1	-13.5728
chr12	75033370	75033386	lincRNA	Gm15283	exon	ENSMUSG00000087700	ProperStrand	30	chr7	142888997	142889050	protein_coding	Mki67	exon	ENSMUSG00000031004	ProperStrand	286	1	-11.5839
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	120430011	120430029	protein_coding	Il17ra	intron	ENSMUSG00000002897	NonProperStrand	6	1	-9.1372
chr7	144344462	144344524	LTR	ORR1B1	MaLR	chr7ORR1B1144344172	ProperStrand	2	chr7	116664825	116664915	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-inf
chr15	76446556	76446586	protein_coding	Slc39a4	exon	ENSMUSG00000063354	ProperStrand	35	chr16	23111760	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.8115
chr17	15889378	15889395	protein_coding	Chd1	exon	ENSMUSG00000023852	ProperStrand	82	chr2	91436228	91436259	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-6.8763
chr5	34322141	34322231	LTR	ORR1C2	MaLR	chr5ORR1C234322131	ProperStrand	1	chr3	107692572	107692662	lincRNA	4933431E20Rik	exon	ENSMUSG00000086968	ProperStrand	2	1	-inf
chr14	73616574	73662340	protein_coding	Rb1	exon	ENSMUSG00000022105	NonProperStrand	3	chr16	23110940	23110957	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr11	82692475	82692491	protein_coding	Rad51l3	exon	ENSMUSG00000018841	ProperStrand	112	chr18	78014558	78016277	protein_coding	Atp5a1	exon	ENSMUSG00000025428	ProperStrand	254	1	-9.1688
chr6	122680100	122685445	protein_coding	Slc2a3	exon	ENSMUSG00000003153	ProperStrand	682	chr8	32260335	32260439	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	3	-2.4104
chr16	23111449	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	NonProperStrand	38	chr18	35716684	35716795	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	NonProperStrand	45	2	-inf
chr2	93044455	93044471	protein_coding	Tspan18	utr3	ENSMUSG00000027217	NonProperStrand	14	chr16	23110875	23110940	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.2008
chr8	109194031	109194079	protein_coding	Cdh1	utr3	ENSMUSG00000000303	ProperStrand	283	chr12	88514999	88515041	protein_coding	Tmed8	exon	ENSMUSG00000034111	ProperStrand	22	5	-19.9999
chr19	44030964	44031018	protein_coding	Cpn1	utr3	ENSMUSG00000025196	ProperStrand	11	chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	1	-12.6504
chr3	79311767	79311851	protein_coding	Fnip2	exon	ENSMUSG00000061175	ProperStrand	45	chr19	8799061	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	4	-19.0432
chr1	89859042	89859058	protein_coding	Usp40	exon	ENSMUSG00000005501	ProperStrand	11	chr15	51709070	51709144	protein_coding	Utp23	exon	ENSMUSG00000022313	ProperStrand	4	1	-20.1343
mmu-miR-7033-5p	2	19	miRNA	mmu-miR-7033-5p	.	mmu-miR-7033-5p	ProperStrand	25	chr7	17040701	17040717	protein_coding	Tmem160	exon	ENSMUSG00000019158	ProperStrand	55	1	-15.2507
chr7	20117356	20117454	protein_coding	Ppp1r37	exon	ENSMUSG00000051403	ProperStrand	34	chr9	86593158	86593180	snRNA	ENSMUSG00000093074_CAAA01037531.1.36077.1	.	ENSMUSG00000093074	ProperStrand	13	1	-17.3022
chr6	146967613	146967670	protein_coding	Ppfibp1	exon	ENSMUSG00000016487	ProperStrand	11	chr2	25134758	25134813	protein_coding	Anapc2	exon	ENSMUSG00000026965	ProperStrand	15	2	-inf
chr6	86389065	86389165	protein_coding	C87436	utr5	ENSMUSG00000046679	ProperStrand	18	chr16	23110961	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	10	-19.0899
chr2	26810086	26811084	protein_coding	Rexo4	exon	ENSMUSG00000052406	ProperStrand	59	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.3933
chr4	126241209	126241226	protein_coding	Clspn	exon	ENSMUSG00000042489	ProperStrand	89	chr16	23111447	23111500	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.7670
chr4	155548795	155549011	protein_coding	Agrn	exon	ENSMUSG00000041936	ProperStrand	175	chr17	35299550	35299640	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-2.7962
chr8	129460945	129461045	protein_coding	Tomm20	exon	ENSMUSG00000058779	ProperStrand	55	chr17	35088957	35089013	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-6.0390
chr5	99372453	99372470	protein_coding	Prkg2	exon	ENSMUSG00000029334	ProperStrand	22	chr17	35088970	35089021	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-7.8713
chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	chr2	70094944	70094962	protein_coding	Myo3b	intron	ENSMUSG00000042064	NonProperStrand	16	1	-12.9639
chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	chr7	133633148	133633180	protein_coding	Tufm	exon	ENSMUSG00000073838	ProperStrand	28	1	-10.9842
chr7	125282983	125283025	protein_coding	Smg1	exon	ENSMUSG00000030655	ProperStrand	70	chr4	131908810	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.0215
chr8	61858707	61858726	LTR	RMER13B	ERVK	chr8RMER13B61858589	NonProperStrand	22	chr1	123399036	123399096	protein_coding	Ccdc93	utr3	ENSMUSG00000026339	ProperStrand	14	1	-18.5274
chr12	80356288	80356339	protein_coding	Zfyve26	exon	ENSMUSG00000066440	ProperStrand	44	chr11	77994800	77994818	snoRNA	ENSMUSG00000064540_Snord42a	.	ENSMUSG00000064540	ProperStrand	142	2	-19.2759
chr11	102294588	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr6	125112716	125112952	protein_coding	Gapdh	exon	ENSMUSG00000057666	ProperStrand	356	2	-8.7940
chr2	91408361	91408841	protein_coding	Ckap5	exon	ENSMUSG00000040549	ProperStrand	53	chr7	148634802	148634836	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-4.2205
chr14	80262508	80262525	lincRNA	Gm6999	intron	ENSMUSG00000075495	ProperStrand	265	chr18	33954815	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-1.0973
chr9	21823257	21823273	protein_coding	Elavl3	exon	ENSMUSG00000003410	NonProperStrand	137	chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-4.8424
chr5	65952377	65952395	protein_coding	Ube2k	intron	ENSMUSG00000029203	ProperStrand	289	chr7	52714029	52714591	protein_coding	Ftl1	exon	ENSMUSG00000050708	ProperStrand	807	2	-8.2623
chr12	81481809	81481864	protein_coding	Dcaf5	intron	ENSMUSG00000049106	ProperStrand	23	chr16	23111739	23111775	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.5778
chr9	108759106	108759324	protein_coding	Slc26a6	exon	ENSMUSG00000023259	NonProperStrand	1	chr11	62416620	62416650	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	NonProperStrand	13	1	-inf
chr2	157834233	157834264	protein_coding	Tti1	exon	ENSMUSG00000027650	ProperStrand	17	chr7	116663634	116663711	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.8573
chr8	26269401	26269480	protein_coding	Tacc1	utr3	ENSMUSG00000065954	ProperStrand	12	chr16	23110986	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.4686
chr5	104869363	104869389	protein_coding	Spp1	exon	ENSMUSG00000029304	ProperStrand	52	chr14	33005060	33005139	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	2	-7.1331
chr13	4127284	4127364	LTR	MMETn-int	ERVK	chr13MMETn-int4124777	NonProperStrand	1	chr5	16057014	16057104	SINE	MIR	MIR	chr5MIR16056954	ProperStrand	1	1	-inf
chr9	78023109	78023172	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr16	84817162	84817262	protein_coding	Jam2	intron	ENSMUSG00000053062	ProperStrand	39	1	-6.7306
chr10	77903472	77903562	protein_coding	Pdxk	utr3	ENSMUSG00000032788	ProperStrand	8	chr17	24857748	24857828	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-6.1404
chr8	98396115	98396166	protein_coding	Got2	exon	ENSMUSG00000031672	ProperStrand	85	chr5	108336412	108336495	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-4.2149
chr6	83720199	83720223	protein_coding	Tex261	utr3	ENSMUSG00000014748	ProperStrand	13	chr2	130101972	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	2	-13.5099
chr5	66088168	66089032	protein_coding	Pds5a	utr5	ENSMUSG00000029202	ProperStrand	62	chr17	24857799	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-4.0058
chr2	181423244	181423325	protein_coding	Rgs19	utr3	ENSMUSG00000002458	ProperStrand	7	chr15	98350146	98350179	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	3	-inf
chr10	77432751	77432771	protein_coding	Trpm2	intron	ENSMUSG00000009292	NonProperStrand	23	chr3	123210907	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-6.4095
chr9	106621301	106621383	protein_coding	Rad54l2	exon	ENSMUSG00000040661	ProperStrand	51	chr4	131908687	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-2.7446
chr1	133827744	133827807	protein_coding	Nucks1	utr3	ENSMUSG00000026434	ProperStrand	59	chr1	75447246	75447262	protein_coding	Accn4	utr5	ENSMUSG00000033007	NonProperStrand	23	1	-15.2692
chr7	134416446	134416536	protein_coding	Sephs2	exon	ENSMUSG00000049091	ProperStrand	15	chr11	69481342	69481422	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.8683
chr4	140257456	140271946	protein_coding	Rcc2	intron	ENSMUSG00000040945	ProperStrand	228	chr18	35716740	35716856	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-2.6396
chr9	65127126	65127142	protein_coding	Cilp	exon	ENSMUSG00000042254	ProperStrand	212	chr10	39978340	39978366	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-3.0820
chr5	34839193	34839283	protein_coding	Tnip2	utr3	ENSMUSG00000059866	ProperStrand	3	chr10	23505201	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-6.9610
chr4	131865867	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr12	110874223	110874292	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	5	-1.5937
chr15	79908931	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	chr10	23505559	23505620	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	2	-1.4093
chr13	46862948	46863022	snoRNA	ENSMUSG00000064558_SNORA55	.	ENSMUSG00000064558	ProperStrand	187	chr10	39978320	39978410	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-3.3077
chr3	127510345	127510435	protein_coding	Ap1ar	utr3	ENSMUSG00000074238	ProperStrand	5	chr7	116663636	116663716	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-7.4047
chr1	75484537	75484553	protein_coding	Obsl1	exon	ENSMUSG00000026211	NonProperStrand	192	chr4	86502156	86502205	protein_coding	Rps6	exon	ENSMUSG00000028495	ProperStrand	263	1	-8.0247
chr7	26472435	26472451	protein_coding	Tgfb1	utr5	ENSMUSG00000002603	NonProperStrand	154	chr5	121655096	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.0903
chr7	13896664	13896755	protein_coding	Lig1	utr3	ENSMUSG00000056394	ProperStrand	89	chr16	23110495	23110527	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.8165
chr1	72895743	72898622	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	chr19	8800365	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	3	-2.2256
chr17	66173797	66173897	protein_coding	Ppp4r1	exon	ENSMUSG00000061950	ProperStrand	46	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.8186
chr15	73559007	73559023	protein_coding	Ptp4a3	intron	ENSMUSG00000059895	ProperStrand	45	chr2	145076803	145209253	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-8.2994
chr2	120182132	120182190	protein_coding	Tmem87a	utr3	ENSMUSG00000033808	ProperStrand	5	chr10	122702078	122702094	protein_coding	Fam19a2	utr5	ENSMUSG00000044071	NonProperStrand	52	1	-18.4781
chr18	35716685	35716873	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	chr7	16524110	16524210	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	5	-1.9739
chr8	97377134	97377165	protein_coding	Coq9	exon	ENSMUSG00000031782	ProperStrand	6	chr7	88674817	88674867	snoRNA	ENSMUSG00000093107_AC167122.1	.	ENSMUSG00000093107	ProperStrand	110	1	-16.8546
chr7	56890567	56890585	protein_coding	Dbx1	intron	ENSMUSG00000030507	NonProperStrand	3	chr4	56910571	56910629	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-12.4445
chr17	24842147	24842237	protein_coding	Tbl3	exon	ENSMUSG00000040688	ProperStrand	42	chr9	120039579	120039659	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.9808
chr11	101443033	101443072	protein_coding	Nbr1	utr3	ENSMUSG00000017119	ProperStrand	91	chr17	71980624	71980642	snoRNA	ENSMUSG00000093289_Snord92	.	ENSMUSG00000093289	ProperStrand	56	1	-12.6155
chr14	52780501	52801893	protein_coding	Supt16h	exon	ENSMUSG00000035726	ProperStrand	193	chr10	23505152	23505255	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	9	-5.9091
chr17	46814084	46814100	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr2	112102637	112102684	protein_coding	Nop10	utr3	ENSMUSG00000027133	ProperStrand	10	1	-12.8940
chr1	192712615	192712631	protein_coding	Rps6kc1	exon	ENSMUSG00000089872	ProperStrand	241	chr2	166890503	166890554	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-4.8296
chr12	111930521	111930562	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr8	44276974	44277023	protein_coding	Triml2	intron	ENSMUSG00000091490	ProperStrand	32	4	-21.8331
chr16	23111727	23111827	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	NonProperStrand	47	chr2	144091716	144091743	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	NonProperStrand	4	2	-inf
chr3	88130450	88130506	protein_coding	0610031J06Rik	exon	ENSMUSG00000001418	ProperStrand	9	chrX	130842676	130842693	protein_coding	Cenpi	utr5	ENSMUSG00000031262	ProperStrand	12	1	-20.0762
chr9	85216765	85216782	protein_coding	Fam46a	utr3	ENSMUSG00000032265	ProperStrand	7	chr4	131908688	131908789	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-12.5557
chr6	30535917	30535935	protein_coding	Cpa4	exon	ENSMUSG00000039070	ProperStrand	1	chr11	55296261	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-inf
chr19	6090988	6091013	protein_coding	Cdca5	utr3	ENSMUSG00000024791	ProperStrand	3	chr15	77356785	77356801	protein_coding	Apol7c	exon	ENSMUSG00000044309	ProperStrand	197	1	-17.3620
chr4	131908232	131908260	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr3	33710269	33710313	protein_coding	Ttc14	utr3	ENSMUSG00000027677	ProperStrand	25	1	-9.0195
chr15	84030306	84030774	protein_coding	Samm50	exon	ENSMUSG00000022437	ProperStrand	51	chr7	116663733	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.7941
chr3	87726064	87726315	protein_coding	Mrpl24	exon	ENSMUSG00000019710	ProperStrand	10	chr8	113481911	113486109	protein_coding	St3gal2	exon	ENSMUSG00000031749	ProperStrand	206	1	-14.5117
chrX	156315498	156315519	protein_coding	Sh3kbp1	intron	ENSMUSG00000040990	ProperStrand	67	chr4	131908688	131908902	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-6.6216
chr5	22992214	22998171	protein_coding	Mll5	exon	ENSMUSG00000029004	ProperStrand	21	chr9	121362367	121362447	protein_coding	Trak1	exon	ENSMUSG00000032536	ProperStrand	152	1	-13.5751
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr2	26494708	26494759	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-0.8683
chr9	120039353	120039416	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	chr13	9636397	9636413	protein_coding	Dip2c	exon	ENSMUSG00000048264	NonProperStrand	51	1	-9.8505
chr11	54510160	54510260	protein_coding	Rapgef6	utr3	ENSMUSG00000037533	ProperStrand	27	chr6	94776846	94776875	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	1	-10.7134
chr8	96703177	96704031	protein_coding	Mt1	exon	ENSMUSG00000031765	ProperStrand	92	chr16	23110828	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-1.1180
chr17	8542310	8542328	protein_coding	Sft2d1	intron	ENSMUSG00000073468	ProperStrand	30	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-8.5933
chr12	107022977	107067273	protein_coding	Papola	utr5	ENSMUSG00000021111	ProperStrand	67	chr7	116664806	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-4.1912
chr6	148185835	148185909	protein_coding	Tmtc1	utr3	ENSMUSG00000030306	ProperStrand	7	chr16	23110986	23111453	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-9.3151
chr3	144233085	144233102	protein_coding	Hs2st1	utr5	ENSMUSG00000040151	ProperStrand	18	chr14	61398407	61398423	protein_coding	C1qtnf9	exon	ENSMUSG00000071347	ProperStrand	187	1	-13.4782
chr9	119820589	119820630	protein_coding	Wdr48	intron	ENSMUSG00000032512	ProperStrand	16	chr7	116663711	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.9773
chr9	61265127	61265217	protein_coding	Tle3	utr3	ENSMUSG00000032280	ProperStrand	88	chr17	74383182	74383199	protein_coding	Srd5a2	intron	ENSMUSG00000038541	ProperStrand	5	4	-20.0865
chr8	113365785	113365805	protein_coding	Sf3b3	exon	ENSMUSG00000033732	ProperStrand	181	chr17	24857717	24857807	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-1.5124
chr2	145545007	145545029	lincRNA	BC039771	intron	ENSMUSG00000087594	ProperStrand	12	chr12	112779149	112779287	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	2	-12.8706
chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	chr17	35990715	35990760	protein_coding	Mdc1	exon	ENSMUSG00000061607	ProperStrand	85	1	-7.8083
chr15	36528062	36528752	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr18	36885432	36885449	protein_coding	Cd14	exon	ENSMUSG00000051439	ProperStrand	65	1	-7.7229
chr2	181043530	181043547	protein_coding	Stmn3	exon	ENSMUSG00000027581	NonProperStrand	17	chr5	121655099	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-6.2021
chr2	79132657	79132674	protein_coding-noncoding	Itga4	utr5	ENSMUSG00000027009	NonProperStrand	118	chr3	108357255	108357355	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-3.2770
chr9	67810932	67811901	protein_coding	Vps13c	exon	ENSMUSG00000035284	ProperStrand	69	chr11	106362341	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-5.5685
chr6	108773104	108773163	protein_coding	Arl8b	utr3	ENSMUSG00000030105	ProperStrand	28	chr9	63868723	63868739	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	2	-15.9586
chr9	40610144	40610169	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr6	50514941	50515041	protein_coding	Cycs	utr3	ENSMUSG00000063694	ProperStrand	11	2	-18.0550
chr19	7350907	7350923	protein_coding	Mark2	utr3	ENSMUSG00000024969	NonProperStrand	9	chr19	8963137	8963181	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.8692
chr11	58682398	58682415	protein_coding	2810021J22Rik	utr5	ENSMUSG00000020491	ProperStrand	162	chr9	78327785	78327817	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	2	-7.3299
chr8	46648732	46648748	protein_coding	Sorbs2	intron	ENSMUSG00000031626	ProperStrand	50	chr4	131908270	131908313	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.6894
chr2	130104012	130104634	protein_coding	Nop56	exon	ENSMUSG00000027405	ProperStrand	125	chr8	32260335	32260372	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-3.2580
chr1	133921822	133921912	protein_coding	Elk4	utr3	ENSMUSG00000026436	ProperStrand	14	chr10	90581059	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-7.7067
chr16	56035920	56035989	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	chr16	18240810	18240910	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	11	-20.3041
chr11	75570371	75570456	protein_coding	Ywhae	exon	ENSMUSG00000020849	ProperStrand	176	chr6	124665422	124665512	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	1	-4.8283
chr13	23713712	23713745	protein_coding	Hist1h1e	exon	ENSMUSG00000051627	ProperStrand	41	chr15	79908956	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	3	-14.3017
chr11	106992739	106992757	protein_coding	Bptf	exon	ENSMUSG00000040481	ProperStrand	70	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.9986
chr16	82506304	82506322	LINE	L1_Mur2	L1	chr16L1_Mur282506077	NonProperStrand	5	chr19	8963130	8963182	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-7.1260
chrX	102733020	102733100	LINE	L1M2	L1	chrXL1M2102733013	NonProperStrand	1	chrX	102732736	102732826	LTR	ORR1B1	MaLR	chrXORR1B1102732518	NonProperStrand	1	1	-inf
chr15	83406531	83406575	protein_coding	Ttll12	utr3	ENSMUSG00000016757	ProperStrand	36	chr16	23110513	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.3689
chr4	56910494	56910628	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	chr2	26494707	26494840	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	138	-19.2344
chrX	72214248	72214264	protein_coding-noncoding	Gab3	utr3	ENSMUSG00000032750	ProperStrand	420	chr11	20012669	20012691	protein_coding	Actr2	intron	ENSMUSG00000020152	NonProperStrand	17	1	-11.9763
chr1	55210787	55210854	protein_coding	Mob4	utr3	ENSMUSG00000025979	ProperStrand	7	chr5	54389948	54389966	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	1	-15.2029
chr11	87861324	87861378	protein_coding	Srsf1	utr5	ENSMUSG00000018379	ProperStrand	49	chr8	47113282	47113298	protein_coding	Lrp2bp	utr3	ENSMUSG00000031637	ProperStrand	14	1	-16.7740
chr1	88995234	88995252	protein_coding	Alpi	exon	ENSMUSG00000079440	NonProperStrand	7	chr4	131865855	131865986	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.7768
chrX	6951555	6951571	protein_coding	Usp27x	exon	ENSMUSG00000046269	NonProperStrand	36	chr1	162965530	162965559	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.2292
chr2	132078624	132078724	protein_coding	Pcna	exon	ENSMUSG00000027342	ProperStrand	25	chr9	63868722	63868738	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	2	-16.3161
chr8	127421824	127421851	protein_coding	Gm505	utr5	ENSMUSG00000031986	ProperStrand	8	chr8	73419697	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-7.0879
chr13	53110975	53110991	SINE	B4	B4	chr13B453110717	ProperStrand	10	chr14	31827477	31827516	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-10.5919
chr12	85350481	85350499	protein_coding	Acot1	utr5	ENSMUSG00000072949	ProperStrand	72	chr9	64024466	64024567	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	8	-19.8519
chr17	24665389	24665445	antisense	2610019E17Rik	.	ENSMUSG00000093565	ProperStrand	24	chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	1	-10.6417
chrX	148320694	148321349	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	chr1	134901001	134901041	protein_coding	Mdm4	intron	ENSMUSG00000054387	ProperStrand	95	1	-8.1455
chr10	11421850	11421869	LTR	RLTR10-int	ERVK	chr10RLTR10-int11421241	NonProperStrand	4	chr7	116663651	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-inf
chr15	98356769	98356815	protein_coding	2310037I24Rik	intron	ENSMUSG00000022992	ProperStrand	91	chr7	36480181	36480281	protein_coding	Dpy19l3	intron	ENSMUSG00000043671	ProperStrand	9	1	-16.3430
chr18	36904141	36904160	protein_coding	Ndufa2	exon	ENSMUSG00000014294	ProperStrand	4	chr9	120038561	120038672	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-8.5118
chr13	38064360	38064377	protein_coding	Ssr1	utr3	ENSMUSG00000021427	ProperStrand	65	chr5	108334210	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-4.6659
chr5	21244798	21245872	protein_coding	Pmpcb	exon	ENSMUSG00000029017	ProperStrand	16	chr17	87316802	87316818	protein_coding	1700090G07Rik	utr5	ENSMUSG00000037689	ProperStrand	7	1	-inf
chr11	31269290	31269370	protein_coding	Stc2	intron	ENSMUSG00000020303	NonProperStrand	3	chr7	116663634	116663724	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	NonProperStrand	51	3	-inf
chr2	73701277	73711752	protein_coding	Atf2	utr5	ENSMUSG00000027104	ProperStrand	37	chr9	120037980	120038028	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	2	-9.2429
chr7	88072751	88079991	protein_coding	Sec11a	exon	ENSMUSG00000025724	ProperStrand	5	chr7	118219574	118219595	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-9.2324
chr11	77994800	77994861	snoRNA	ENSMUSG00000064540_Snord42a	.	ENSMUSG00000064540	ProperStrand	142	chr19	8963026	8963083	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-1.9758
mmu-miR-292a-3p	3	24	miRNA	mmu-miR-292a-3p	.	mmu-miR-292a-3p	ProperStrand	38	chr2	32779984	32780048	protein_coding	Fam129b	utr3	ENSMUSG00000026796	ProperStrand	22	1	-16.2903
chr3	94986514	94986538	protein_coding	Gabpb2	utr3	ENSMUSG00000038766	ProperStrand	39	chr4	131908300	131908347	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.0833
chr4	85016349	85016365	protein_coding	Sh3gl2	intron	ENSMUSG00000028488	NonProperStrand	313	chr14	33005111	33005139	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-1.2261
chr14	105708222	105708238	protein_coding	Ndfip2	utr3	ENSMUSG00000053253	NonProperStrand	2	chr4	131826033	131826126	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	1	-16.6824
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	8542310	8542328	protein_coding	Sft2d1	intron	ENSMUSG00000073468	ProperStrand	30	1	-5.8128
mmu-miR-6238	2	20	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr5	92387014	92391663	protein_coding	Rchy1	exon	ENSMUSG00000029397	NonProperStrand	12	1	-13.8207
chr9	98850236	98850256	lincRNA	Foxl2os	exon	ENSMUSG00000074122	NonProperStrand	6	chr7	116664793	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-11.6238
chr6	29325656	29325724	protein_coding	Calu	utr3	ENSMUSG00000029767	ProperStrand	47	chr1	162968466	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-6.5621
chr7	3608557	3609913	protein_coding	Cnot3	exon	ENSMUSG00000035632	ProperStrand	55	chr11	69483192	69483278	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-4.5688
chr18	35716683	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	chr4	41150095	41150159	snoRNA	ENSMUSG00000089265_SNORD121A	.	ENSMUSG00000089265	ProperStrand	370	7	-3.5491
chr15	36702314	36705296	protein_coding	Ywhaz	exon	ENSMUSG00000022285	ProperStrand	73	chr11	69481334	69481459	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-4.9532
chr19	39917317	39917333	protein_coding	Cyp2c69	utr3	ENSMUSG00000092008	NonProperStrand	83	chr19	8963027	8963083	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.7527
chr1	164610129	164654973	protein_coding	Prrc2c	exon	ENSMUSG00000040225	ProperStrand	413	chr5	130300460	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	5	-2.2028
chr13	51654819	51654836	protein_coding	Shc3	intron	ENSMUSG00000021448	ProperStrand	50	chr2	130101241	130101308	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-6.9532
chr3	19528533	19528551	protein_coding	1700064H15Rik	exon	ENSMUSG00000082766	NonProperStrand	78	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.7258
chr2	49384481	49385557	protein_coding	Epc2	exon	ENSMUSG00000069495	ProperStrand	15	chr7	117189897	117189932	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-9.8576
chr9	21934462	21934478	protein_coding	Acp5	exon	ENSMUSG00000001348	ProperStrand	66	chr2	57090809	57090827	protein_coding	Gpd2	utr5	ENSMUSG00000026827	ProperStrand	93	1	-12.2409
chr2	181405343	181405359	protein_coding	Sox18	exon	ENSMUSG00000046470	ProperStrand	96	chr9	64023228	64023286	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	1	-7.5073
chr11	31772818	31772908	protein_coding	Cpeb4	exon	ENSMUSG00000020300	ProperStrand	4	chr4	122970391	122970471	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	2	-inf
chr17	39980045	39980124	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	NonProperStrand	5	chr10	39978370	39978470	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	NonProperStrand	27	2	-19.7213
chr8	127317555	127317573	protein_coding	Trim67	utr5	ENSMUSG00000036913	ProperStrand	43	chr15	34370545	34370591	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-4.1733
chr12	110888609	110888689	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr8	122048446	122049304	protein_coding	Mbtps1	exon	ENSMUSG00000031835	ProperStrand	81	1	-8.0662
mmu-miR-6240	1	23	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr2	26493364	26493485	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	12	-1.6701
chr10	80640855	80645213	protein_coding	Eef2	utr3	ENSMUSG00000034994	ProperStrand	2244	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	5	-2.5927
chr16	93572719	93572799	LTR	ORR1E	MaLR	chr16ORR1E93572697	ProperStrand	2	chr16	93572342	93572432	Simple_repeat	(GAAA)n	Simple_repeat	chr16(GAAA)n93572263	NonProperStrand	1	1	-inf
chr11	60536934	60538326	protein_coding	Flii	exon	ENSMUSG00000002812	ProperStrand	42	chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-7.1634
chr6	18060435	18060452	LINE	L2b	L2	chr6L2b18060428	NonProperStrand	3	chr9	103267783	103267859	protein_coding	Cdv3	utr5	ENSMUSG00000032803	ProperStrand	68	1	-19.2957
chr7	50690726	50690742	protein_coding	Lim2	exon	ENSMUSG00000004613	NonProperStrand	50	chr15	98356826	98356885	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	1	-8.1186
chr7	20281835	20282863	protein_coding	Apoe	exon	ENSMUSG00000002985	ProperStrand	231	chr9	15119651	15119969	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	8	-9.6690
chr9	78326508	78328437	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr4	131866155	131866276	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	22	-11.0890
mmu-miR-6240	4	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr1	168325832	168325849	protein_coding	Pogk	utr3	ENSMUSG00000040596	NonProperStrand	2	1	-13.3349
chr4	41065967	41066009	protein_coding	Nol6	exon	ENSMUSG00000028430	ProperStrand	98	chr4	108278918	108278934	protein_coding	Orc1	exon	ENSMUSG00000028587	ProperStrand	161	1	-10.3469
chr5	118477951	118477967	protein_coding	Tesc	exon	ENSMUSG00000029359	ProperStrand	114	chr7	109334426	109334526	protein_coding	Nup98	utr5	ENSMUSG00000063550	ProperStrand	100	1	-10.9979
chr11	100967646	100967708	protein_coding	Fam134c	utr5	ENSMUSG00000017802	ProperStrand	11	chr16	23110509	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.6740
chr14	19965985	19966065	LTR	ETnERV-int	ERVK	chr14ETnERV-int19965750	NonProperStrand	1	chr14	18819783	18819873	protein_coding	Thrb	intron	ENSMUSG00000021779	NonProperStrand	3	1	-inf
chr12	17553054	17553089	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr19	25016725	25016787	snoRNA	ENSMUSG00000064896_SNORA19	.	ENSMUSG00000064896	ProperStrand	88	1	-4.3536
chr2	169711445	169711462	protein_coding	Tshz2	exon	ENSMUSG00000047907	ProperStrand	14	chr7	117189875	117189913	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-6.1508
chr9	103267976	103267998	protein_coding	Cdv3	utr5	ENSMUSG00000032803	ProperStrand	68	chr7	51505226	51505308	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	1	-7.9013
chr12	41824609	41824625	protein_coding	Immp2l	intron	ENSMUSG00000056899	NonProperStrand	19	chr14	76247711	76247778	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-6.4242
chr5	144760040	144760059	protein_coding	Ccz1	intron	ENSMUSG00000029617	NonProperStrand	8	chr4	131865856	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	5	-19.2540
chr7	27553651	27553672	protein_coding	Cyp2b19	intron	ENSMUSG00000066704	NonProperStrand	1	chr10	90581034	90581086	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-inf
chr5	52576046	52576081	protein_coding	Dhx15	exon	ENSMUSG00000029169	ProperStrand	53	chr4	131865932	131865987	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.9636
chr2	128627013	128627090	protein_coding	Mertk	exon	ENSMUSG00000014361	ProperStrand	10	chr13	54723202	54723218	protein_coding	Faf2	exon	ENSMUSG00000025873	ProperStrand	90	1	-16.1631
chr13	9833575	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr8	69413668	69413722	protein_coding	Naf1	utr3	ENSMUSG00000014907	ProperStrand	104	3	-9.5318
chr8	26927388	26927473	protein_coding	Ash2l	utr3	ENSMUSG00000031575	ProperStrand	113	chr5	130300436	130300526	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	5	-8.1359
chr1	55062513	55062603	protein_coding	Sf3b1	intron	ENSMUSG00000025982	ProperStrand	158	chr9	120039544	120039624	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.6822
chr8	25920545	25921169	protein_coding	Adam5	exon	ENSMUSG00000031554	ProperStrand	49	chr7	19590197	19590213	protein_coding	Irf2bp1	exon	ENSMUSG00000044030	NonProperStrand	81	1	-13.1223
chr12	70442013	70442309	protein_coding	Nemf	exon	ENSMUSG00000020982	ProperStrand	77	chr17	13115722	13115783	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	1	-7.0371
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr5	110673571	110678379	protein_coding	Ankle2	exon	ENSMUSG00000029501	ProperStrand	23	1	-9.9088
chr14	20451772	20451790	LTR	IAPLTR3-int	ERVK	chr14IAPLTR3-int20447903	ProperStrand	44	chr3	89819248	89819361	protein_coding	Ubap2l	exon	ENSMUSG00000042520	ProperStrand	88	1	-13.1719
chr5	144675501	144689818	protein_coding	Pms2	exon	ENSMUSG00000079109	ProperStrand	21	chr5	121655034	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-9.4735
mmu-miR-2137	1	18	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	chr5	74489544	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	3	-5.9879
chr2	164578080	164578180	protein_coding	Dnttip1	intron	ENSMUSG00000017299	NonProperStrand	2	chr11	74718976	74719010	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	1	-16.5328
chr17	13112450	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	chr19	8799829	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	11	-1.0958
chr10	79517765	79518687	protein_coding	Gpx4	exon	ENSMUSG00000075706	ProperStrand	55	chr9	15118334	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.6272
chr8	53534079	53534159	LINE	L1VL4	L1	chr8L1VL453534041	NonProperStrand	1	chr8	53533892	53533982	SINE	B3	B2	chr8B353533804	ProperStrand	1	1	-inf
chr15	26031964	26031983	LINE	Lx8	L1	chr15Lx826031720	NonProperStrand	1	chr15	31388200	31388227	protein_coding	March6	utr3	ENSMUSG00000039100	ProperStrand	94	1	-inf
chr15	99146285	99146571	protein_coding	Prpf40b	exon	ENSMUSG00000023007	ProperStrand	5	chr15	34370545	34370589	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-8.5662
chr14	22489719	22489739	protein_coding	Myst4	exon	ENSMUSG00000021767	ProperStrand	151	chr18	67840636	67841103	protein_coding	Ptpn2	exon	ENSMUSG00000024539	ProperStrand	35	2	-19.2719
chr11	40580162	40580182	LINE	L1M3	L1	chr11L1M340580022	ProperStrand	4	chr1	162968467	162968512	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	3	-inf
chr5	23940662	23940678	protein_coding	Slc4a2	exon	ENSMUSG00000028962	NonProperStrand	4	chr8	13416895	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-12.1048
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr10	61732033	61732133	protein_coding	Hk1	utr3	ENSMUSG00000037012	ProperStrand	84	1	-5.7072
chr8	83357765	83357884	protein_coding	Gab1	intron	ENSMUSG00000031714	ProperStrand	72	chr2	89368462	89368478	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	4	-21.2609
chr16	22265392	22265487	protein_coding	Tra2b	intron	ENSMUSG00000022858	ProperStrand	32	chr7	140190503	140190541	protein_coding	Ctbp2	exon	ENSMUSG00000030970	ProperStrand	89	1	-13.7966
chr9	103950068	103950086	protein_coding	Uba5	intron	ENSMUSG00000032557	ProperStrand	111	chr17	34022155	34022818	protein_coding	Kifc1	exon	ENSMUSG00000079553	ProperStrand	47	1	-12.5718
chr5	74489253	74489323	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr6	112577177	112577269	protein_coding-noncoding	Rad18	utr3	ENSMUSG00000030254	ProperStrand	3	1	-11.9468
chr12	107028475	107028528	protein_coding	Papola	intron	ENSMUSG00000021111	ProperStrand	67	chr2	26493395	26493485	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-3.5381
chr4	140387550	140387567	protein_coding	Padi1	intron	ENSMUSG00000025329	NonProperStrand	13	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-9.6852
chr5	30441216	30441233	protein_coding	Fam59b	exon	ENSMUSG00000044576	ProperStrand	2	chr3	96226653	96226753	snRNA	ENSMUSG00000065020_U1	.	ENSMUSG00000065020	NonProperStrand	2	2	-inf
chr11	58682475	58682491	protein_coding	2810021J22Rik	utr5	ENSMUSG00000020491	ProperStrand	162	chr3	136462971	136462990	protein_coding	Ppp3ca	intron	ENSMUSG00000028161	ProperStrand	45	1	-11.9007
chr14	19102817	19102876	protein_coding	Rpl15	exon	ENSMUSG00000012405	ProperStrand	145	chr3	88952697	88952713	protein_coding	Hcn3	exon	ENSMUSG00000028051	ProperStrand	40	1	-12.3611
chr19	41348803	41348819	protein_coding	Pik3ap1	exon	ENSMUSG00000025017	NonProperStrand	26	chr2	22444820	22444870	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-9.4602
chr10	93587602	93587692	protein_coding	Fgd6	intron	ENSMUSG00000020021	ProperStrand	15	chr9	120038466	120038530	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.6922
chr6	145764132	145764232	protein_coding	Rassf8	exon	ENSMUSG00000030259	ProperStrand	23	chr1	162965559	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.0979
chr8	96589935	96590035	protein_coding	Ogfod1	utr3	ENSMUSG00000033009	ProperStrand	18	chr1	39605591	39605632	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-9.7751
chr11	71967337	71967427	SINE	MIR	MIR	chr11MIR71967287	NonProperStrand	1	chr11	71967447	71967527	protein_coding-noncoding	4933427D14Rik	utr3	ENSMUSG00000020807	ProperStrand	1	1	-inf
chr3	89743819	89743891	protein_coding	Atp8b2	utr3	ENSMUSG00000060671	ProperStrand	140	chr9	120038607	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.6300
chr13	28843546	28845886	lincRNA	2610307P16Rik	intron	ENSMUSG00000085936	ProperStrand	154	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-2.0731
chr5	144181864	144181885	protein_coding	Kdelr2	exon	ENSMUSG00000079111	ProperStrand	25	chr18	35716811	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.7263
chr7	52958453	52958469	protein_coding	Car11	exon	ENSMUSG00000003273	NonProperStrand	250	chr17	35087940	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-2.5593
chr15	55771477	55771496	LINE	Lx8	L1	chr15Lx855771137	NonProperStrand	1	chr15	79913300	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-inf
chr12	114089767	114089783	protein_coding	Gpr132	utr3	ENSMUSG00000021298	ProperStrand	7	chr6	136046697	136046717	protein_coding	Grin2b	intron	ENSMUSG00000030209	ProperStrand	8	2	-19.1502
chr9	40611665	40611725	snoRNA	ENSMUSG00000075876_Snord14c	.	ENSMUSG00000075876	ProperStrand	104	chr5	108334222	108334312	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-3.7771
chr5	141000810	141000849	protein_coding	Chst12	utr3	ENSMUSG00000036599	ProperStrand	7	chr18	33954817	33954907	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	4	-19.6525
chr2	130109497	130109513	protein_coding	Idh3b	exon	ENSMUSG00000027406	ProperStrand	146	chr2	130101242	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-4.8536
chr6	131330344	131330424	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	ProperStrand	408	chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	2	-4.0650
chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-5.7251
chr2	93646200	93646290	protein_coding	Ext2	exon	ENSMUSG00000027198	ProperStrand	49	chr19	8963081	8963161	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.6199
chr12	77168882	77168900	protein_coding	Syne2	intron	ENSMUSG00000063450	ProperStrand	63	chr5	121655016	121655097	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-6.2002
chr1	133827913	133827950	protein_coding	Nucks1	utr3	ENSMUSG00000026434	ProperStrand	59	chr6	115758002	115758092	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-5.5048
chr7	137812904	137812921	protein_coding	Tacc2	intron	ENSMUSG00000030852	ProperStrand	95	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-7.6753
chr17	4082184	4082235	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr9	15119377	15119425	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-2.0743
chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	chr9	15118322	15118380	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-1.2565
chr5	31829663	31829681	protein_coding	Slc4a1ap	exon	ENSMUSG00000029141	ProperStrand	9	chr7	24984525	24984585	protein_coding	Zfp111	exon	ENSMUSG00000087598	ProperStrand	3	1	-inf
chr3	96503729	96503930	protein_coding	Pias3	exon	ENSMUSG00000028101	ProperStrand	5	chr18	63908609	63908625	protein_coding	Wdr7	intron	ENSMUSG00000040560	NonProperStrand	180	2	-20.3517
chr15	51796524	51798146	protein_coding	Rad21	exon	ENSMUSG00000022314	ProperStrand	85	chr1	162965552	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	7	-17.7851
chr7	148348782	148349125	protein_coding	Rnh1	exon	ENSMUSG00000038650	ProperStrand	12	chr16	23110856	23111005	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	7	-19.0936
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	11	-13.0666
chr4	134893772	134893868	protein_coding	Srrm1	exon	ENSMUSG00000028809	ProperStrand	142	chr4	131908704	131908750	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	8	-6.7565
chr7	129257923	129264606	protein_coding	Palb2	exon	ENSMUSG00000044702	ProperStrand	8	chr3	85942714	85942772	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	1	-13.8579
chr17	35089181	35089205	processed_transcript	1110038B12Rik	.	ENSMUSG00000092203	ProperStrand	126	chr5	125922177	125922237	protein_coding	Bri3bp	exon	ENSMUSG00000037905	ProperStrand	43	1	-12.4960
chrX	45856924	45856986	protein_coding	Aifm1	intron	ENSMUSG00000036932	ProperStrand	14	chr10	23505190	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-6.3221
chr7	65160189	65160205	LTR	ORR1A2	MaLR	chr7ORR1A265160005	NonProperStrand	1	chr11	6428055	6428088	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-inf
chr19	45698865	45698882	protein_coding	Fbxw4	intron	ENSMUSG00000040913	NonProperStrand	6	chr9	15118322	15118343	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-8.0740
chr1	163059232	163059249	protein_coding	Klhl20	intron	ENSMUSG00000026705	NonProperStrand	3	chr6	125184930	125184982	protein_coding	Vamp1	intron	ENSMUSG00000030337	ProperStrand	8	1	-20.4785
chr6	71339176	71339208	protein_coding	Rmnd5a	utr3	ENSMUSG00000002222	ProperStrand	38	chr10	110918604	110918694	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-4.3053
chr10	75399006	75399096	protein_coding	Chchd10	exon	ENSMUSG00000049422	ProperStrand	140	chr11	97643011	97643091	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-2.2604
chr15	85699137	85699172	protein_coding	Gtse1	exon	ENSMUSG00000022385	ProperStrand	74	chr4	131908236	131908357	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.1297
chr19	42119440	42119457	protein_coding	Ankrd2	exon	ENSMUSG00000025172	ProperStrand	2	chr9	120038548	120038649	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	NonProperStrand	28	1	-20.1779
chr18	12172461	12172477	protein_coding	6030446N20Rik	intron	ENSMUSG00000049411	ProperStrand	235	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.0896
chr2	155104044	155104093	protein_coding	Pigu	utr3	ENSMUSG00000038383	ProperStrand	14	chr11	62590605	62590631	protein_coding	Zfp286	intron	ENSMUSG00000047342	NonProperStrand	11	3	-inf
chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	chr18	12172461	12172477	protein_coding	6030446N20Rik	intron	ENSMUSG00000049411	ProperStrand	235	1	-7.8895
chr1	138365716	138365732	protein_coding	Kif14	exon	ENSMUSG00000041498	ProperStrand	13	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	4	-18.7507
chr12	109441300	109441400	protein_coding	Ccnk	utr3	ENSMUSG00000021258	ProperStrand	31	chr9	15119736	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.8279
chr11	116535932	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr9	54267671	54267771	protein_coding	Dmxl2	exon	ENSMUSG00000041268	ProperStrand	18	1	-8.3236
chr9	95525000	95525036	antisense	Gm16126	.	ENSMUSG00000086585	NonProperStrand	229	chr11	106649719	106649799	protein_coding	Ddx5	utr5	ENSMUSG00000020719	ProperStrand	181	1	-8.4174
chr7	20309873	20309924	protein_coding	Pvrl2	exon	ENSMUSG00000062300	ProperStrand	110	chr6	115758010	115758110	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	2	-7.1795
chr19	14592448	14619343	protein_coding	Tle4	exon	ENSMUSG00000024642	ProperStrand	23	chr19	37079111	37084137	protein_coding	Btaf1	exon	ENSMUSG00000040565	ProperStrand	23	1	-17.0137
chr12	112830962	112830978	protein_coding	Mark3	exon	ENSMUSG00000007411	NonProperStrand	22	chr5	108336363	108336409	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-6.8629
chr18	10150974	10151035	snRNA	ENSMUSG00000065941_U1	.	ENSMUSG00000065941	ProperStrand	47	chr18	35716787	35716877	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.5824
chr11	115651519	115651551	protein_coding	2310067B10Rik	exon	ENSMUSG00000020747	ProperStrand	74	chr8	26879777	26879793	protein_coding	Gm17484	utr3	ENSMUSG00000091514	ProperStrand	68	1	-12.6397
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr7	34998076	34998200	protein_coding	Gpi1	intron	ENSMUSG00000036427	ProperStrand	288	1	-3.3687
chr6	122679319	122686715	protein_coding	Slc2a3	exon	ENSMUSG00000003153	ProperStrand	682	chr18	63109676	63109692	protein_coding	Apcdd1	exon	ENSMUSG00000071847	NonProperStrand	254	2	-9.1337
chr16	89909322	89909344	protein_coding	Tiam1	intron	ENSMUSG00000002489	NonProperStrand	26	chr16	23111447	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.5788
chr1	161270503	161270574	protein_coding	Rfwd2	intron	ENSMUSG00000040782	ProperStrand	17	chr9	108386129	108386409	protein_coding	Lamb2	exon	ENSMUSG00000052911	ProperStrand	35	1	-17.0167
chr9	96101488	96101622	protein_coding	Tfdp2	intron	ENSMUSG00000032411	ProperStrand	95	chr8	73419657	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-6.2222
chr9	44524606	44524622	protein_coding	Phldb1	exon	ENSMUSG00000048537	ProperStrand	17	chr9	120038552	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.4412
chr8	129468756	129468836	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	chr4	86232356	86232446	snoRNA	ENSMUSG00000088958_Scarna8	.	ENSMUSG00000088958	ProperStrand	366	1	-1.3177
chr14	19117664	19117769	protein_coding	Ube2e1	exon	ENSMUSG00000021774	ProperStrand	8	chr9	15118323	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-7.4559
chr13	85255957	85256047	LTR	ORR1B1-int	MaLR	chr13ORR1B1-int85255971	NonProperStrand	1	chr1	191774063	191774143	LTR	ORR1A4	MaLR	chr1ORR1A4191773986	NonProperStrand	1	1	-inf
chr2	57191362	57191419	protein_coding	Gpd2	exon	ENSMUSG00000026827	ProperStrand	93	chr7	29136545	29136635	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	7	-13.3721
chr19	8798740	8798812	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	chr10	23505559	23505628	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	2	-0.8325
chr9	114598396	114614219	protein_coding	Dync1li1	exon	ENSMUSG00000032435	ProperStrand	33	chr5	113919913	113919930	protein_coding	Wscd2	utr5	ENSMUSG00000085571	NonProperStrand	40	1	-15.3331
chr15	37958481	37959305	protein_coding	Ubr5	exon	ENSMUSG00000037487	ProperStrand	258	chr8	73419657	73419683	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	4	-4.2028
chr11	98111457	98111512	protein_coding	Cdk12	exon	ENSMUSG00000003119	ProperStrand	50	chr19	8798484	8798535	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-5.5676
chr8	48966880	48966898	protein_coding	Wwc2	intron	ENSMUSG00000031563	NonProperStrand	56	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.8759
chr2	153501546	153502460	protein_coding	Dnmt3b	exon	ENSMUSG00000027478	ProperStrand	19	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-7.4992
chr17	35299513	35299613	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	chr13	22006767	22006796	tRNA	tRNA85-LeuCAA	.	1525143	ProperStrand	54	1	-4.9808
chr7	19683130	19683230	protein_coding	Six5	utr3	ENSMUSG00000040841	ProperStrand	8	chr11	62418014	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-9.6511
chr2	168580748	168580983	protein_coding	Sall4	exon	ENSMUSG00000027547	ProperStrand	82	chr16	23110902	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-1.3973
chr19	5364734	5364791	protein_coding	Banf1	utr3	ENSMUSG00000024844	ProperStrand	34	chr2	166890503	166890581	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-8.6970
chr11	70799398	70800718	protein_coding	Dhx33	utr3	ENSMUSG00000040620	ProperStrand	41	chr18	35716811	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-4.9237
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr16	33210034	33210104	protein_coding	Osbpl11	exon	ENSMUSG00000022807	ProperStrand	31	2	-12.3241
chr10	29084265	29084329	Simple_repeat	(TC)n	Simple_repeat	chr10(TC)n29084275	ProperStrand	1	chr7	116663715	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-inf
chr11	77995188	77995259	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	chr19	17900099	17900117	snoRNA	ENSMUSG00000089540_snoU13	.	ENSMUSG00000089540	ProperStrand	99	3	-12.1826
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr10	41644311	41644329	protein_coding	Armc2	exon	ENSMUSG00000071324	ProperStrand	281	1	-4.7651
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr3	38790074	38790090	protein_coding	Fat4	exon	ENSMUSG00000046743	NonProperStrand	13	1	-13.5459
chr7	34997761	34997851	protein_coding	Gpi1	intron	ENSMUSG00000036427	ProperStrand	288	chr17	35087892	35087948	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-2.3201
chr4	15898056	15898954	protein_coding	Nbn	exon	ENSMUSG00000028224	ProperStrand	1	chr7	150717298	150717348	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-inf
chr7	87230761	87230788	protein_coding	Zfp710	intron	ENSMUSG00000048897	ProperStrand	229	chr4	131908689	131908808	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-0.9272
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	33276377	33276393	protein_coding	Pm20d2	utr5	ENSMUSG00000054659	ProperStrand	19	1	-6.7268
chr14	34063376	34063394	protein_coding	Arhgap22	intron	ENSMUSG00000063506	NonProperStrand	6	chr8	73419657	73419712	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-7.7047
chr1	174045187	174047324	protein_coding	Copa	exon	ENSMUSG00000026553	ProperStrand	33	chr7	116663649	116663759	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-8.9462
chr7	19495537	19495627	protein_coding	Ccdc61	utr5	ENSMUSG00000074358	ProperStrand	27	chr5	108334198	108334278	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-6.3892
chr11	48614370	48614432	snoRNA	ENSMUSG00000064500_SNORD95	.	ENSMUSG00000064500	ProperStrand	100	chr17	35299551	35299641	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-3.8087
chr2	28544927	28544977	protein_coding	Tsc1	utr3	ENSMUSG00000026812	ProperStrand	29	chr4	131908689	131908753	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-4.1963
chr7	129313223	129313313	protein_coding	Plk1	utr3	ENSMUSG00000030867	ProperStrand	146	chr7	116664800	116664880	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.1724
chr13	51797686	51797776	protein_coding	Sema4d	utr3	ENSMUSG00000021451	ProperStrand	42	chr19	8963096	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.8907
chr1	183853967	183860859	protein_coding	Enah	exon	ENSMUSG00000022995	ProperStrand	196	chr1	59749360	59749405	snoRNA	ENSMUSG00000077358_SNORD70	.	ENSMUSG00000077358	ProperStrand	63	3	-inf
chr15	102317539	102319231	protein_coding	Pcbp2	exon	ENSMUSG00000056851	ProperStrand	164	chr4	131908264	131908416	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-0.7443
mmu-miR-6238	1	20	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr1	138178661	138178677	protein_coding	Camsap2	exon	ENSMUSG00000041570	NonProperStrand	116	1	-9.2117
chr17	85482653	85489599	protein_coding	Prepl	utr5	ENSMUSG00000024127	ProperStrand	106	chr16	23110526	23110573	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.5509
chr19	16328227	16328317	protein_coding	Gnaq	intron	ENSMUSG00000024639	ProperStrand	38	chr16	23110902	23110982	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.7634
chr9	57638401	57638419	protein_coding	Arid3b	exon	ENSMUSG00000004661	ProperStrand	39	chr1	88252835	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-7.4987
chr9	44143923	44144023	protein_coding	H2afx	utr3	ENSMUSG00000049932	ProperStrand	137	chr14	31827496	31827516	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-5.3221
chr4	107061430	107061518	protein_coding	Tmem48	intron	ENSMUSG00000028614	ProperStrand	42	chr11	69481432	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.8588
chr13	113342175	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	chr4	131865855	131865978	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	15	-5.7869
chr10	127480574	127480590	protein_coding	Naca	exon	ENSMUSG00000061315	NonProperStrand	13	chr11	62416578	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-8.2303
chr2	118938564	118938654	protein_coding	Rad51	utr5	ENSMUSG00000027323	ProperStrand	10	chr4	131865867	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-8.4478
chr2	90235292	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr18	33157688	33157705	protein_coding	Camk4	intron	ENSMUSG00000038128	NonProperStrand	42	2	-8.4875
chr6	49211147	49211227	protein_coding	Tra2a	intron	ENSMUSG00000029817	ProperStrand	54	chr7	29136547	29136637	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.5445
chr5	127737478	127737494	antisense	1700085B03Rik	.	ENSMUSG00000087104	ProperStrand	55	chr3	55987229	55987246	protein_coding	Nbea	utr5	ENSMUSG00000027799	NonProperStrand	115	1	-12.1817
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr14	76247711	76247842	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	4	-2.9659
chr13	46862939	46863007	snoRNA	ENSMUSG00000064558_SNORA55	.	ENSMUSG00000064558	ProperStrand	187	chr9	15119722	15119968	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-0.9184
chr15	88906566	88906582	protein_coding	Trabd	utr5	ENSMUSG00000015363	NonProperStrand	1	chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	1	-inf
chr16	55904820	55904837	protein_coding	Cep97	utr3	ENSMUSG00000022604	ProperStrand	22	chr7	38354919	38354935	protein_coding	Zfp536	exon	ENSMUSG00000043456	NonProperStrand	236	1	-12.5986
chr11	119136228	119136244	protein_coding	Gaa	exon	ENSMUSG00000025579	NonProperStrand	201	chr2	26242543	26242586	protein_coding	Sdccag3	exon	ENSMUSG00000026927	ProperStrand	10	1	-14.5494
chr8	53878288	53878309	LINE	L1Md_F2	L1	chr8L1Md_F253878128	ProperStrand	2	chr4	131865377	131865515	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	2	-inf
chr11	74718931	74718962	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	chrX	143918835	143918878	snoRNA	ENSMUSG00000084421_SNORA35	.	ENSMUSG00000084421	ProperStrand	293	2	-9.5622
chr8	3803259	3803339	misc_RNA	RNaseP_nuc	.	ENSMUSG00000088025	ProperStrand	328	chr15	36528015	36528744	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	1	-4.5541
chr2	179992519	179992753	protein_coding	Rps21	exon	ENSMUSG00000039001	ProperStrand	46	chr10	110918657	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-3.9429
chrX	93136011	93136027	protein_coding	Las1l	exon	ENSMUSG00000057421	ProperStrand	248	chr15	79908929	79908956	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-2.8167
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr9	122075466	122075482	protein_coding	Snrk	exon	ENSMUSG00000038145	NonProperStrand	97	1	-4.9675
chr9	46089463	46089479	protein_coding	Zfp259	utr3	ENSMUSG00000032078	ProperStrand	9	chr5	108334195	108334220	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-8.6398
chr15	97521689	97523682	protein_coding	Rpap3	exon	ENSMUSG00000022466	ProperStrand	13	chr10	23505200	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.8218
chrX	34622925	34623015	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	NonProperStrand	26	chr4	132394362	132394442	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	NonProperStrand	1	1	-inf
chr14	65677828	65677866	protein_coding	Extl3	exon	ENSMUSG00000021978	ProperStrand	36	chr15	79913288	79913336	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.5578
chr2	97889226	97889316	LINE	L1Md_F2	L1	chr2L1Md_F297884270	NonProperStrand	1	chr16	66690214	66690304	protein_coding	Cadm2	intron	ENSMUSG00000064115	ProperStrand	9	1	-inf
chr18	20123591	20123608	protein_coding	Dsc3	intron	ENSMUSG00000059898	ProperStrand	31	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.5161
chr2	152657362	152657379	protein_coding	Bcl2l1	utr5	ENSMUSG00000007659	NonProperStrand	29	chr19	8799833	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-6.3764
chr12	114151840	114151894	protein_coding	Jag2	exon	ENSMUSG00000002799	ProperStrand	28	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	5	-inf
chr12	66163718	66164678	protein_coding	Fkbp3	exon	ENSMUSG00000020949	ProperStrand	8	chr8	26683603	26683673	protein_coding	Fgfr1	exon	ENSMUSG00000031565	ProperStrand	10	1	-19.4909
chr15	100020738	100021478	protein_coding	Dip2b	exon	ENSMUSG00000023026	ProperStrand	48	chr1	59743744	59743824	protein_coding	Nop58	intron	ENSMUSG00000026020	ProperStrand	104	5	-inf
chr4	55431651	55431668	lincRNA	Gm12505	exon	ENSMUSG00000087070	ProperStrand	447	chr7	4745113	4745213	protein_coding	Rpl28	exon	ENSMUSG00000030432	ProperStrand	220	1	-6.7056
chr16	5100103	5100119	protein_coding	Ppl	exon	ENSMUSG00000039457	ProperStrand	37	chr1	162965531	162965550	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.1770
chr15	68769294	68769312	protein_coding	Khdrbs3	intron	ENSMUSG00000022332	NonProperStrand	5	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-8.2678
chr11	8536307	8536327	protein_coding	Tns3	intron	ENSMUSG00000020422	NonProperStrand	24	chr12	114403165	114403208	protein_coding	4930427A07Rik	utr3	ENSMUSG00000037466	ProperStrand	8	1	-18.7770
chr1	72757863	72757880	protein_coding	Rpl37a	utr5	ENSMUSG00000046330	ProperStrand	94	chr8	73419657	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-6.2608
chr6	28462958	28470155	protein_coding	Snd1	utr5	ENSMUSG00000001424	ProperStrand	210	chr1	117926172	117926190	protein_coding	Cntnap5a	intron	ENSMUSG00000070695	NonProperStrand	9	1	-14.6962
chr8	61858707	61858726	LTR	RMER13B	ERVK	chr8RMER13B61858589	NonProperStrand	22	chr11	106362671	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-9.4258
chr7	38762109	38762141	protein_coding	C80913	intron	ENSMUSG00000030421	ProperStrand	25	chr4	131865380	131865459	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-5.6979
chr10	90610698	90610785	protein_coding	Tmpo	utr3	ENSMUSG00000019961	ProperStrand	57	chr6	115757992	115758014	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-5.5723
chr11	23261377	23261605	protein_coding	Usp34	exon	ENSMUSG00000056342	ProperStrand	68	chr7	118219574	118219643	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-3.9346
chr11	80041932	80041950	protein_coding	Rhot1	intron	ENSMUSG00000017686	ProperStrand	40	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-9.7425
chr17	45705054	45705215	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr4	126731618	126736119	protein_coding	Zmym1	exon	ENSMUSG00000043872	ProperStrand	11	1	-10.1742
chr7	52409137	52409196	protein_coding	Aldh16a1	intron	ENSMUSG00000007833	ProperStrand	27	chr9	15118563	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	1	-10.9551
chrX	165695583	165695599	protein_coding	Arhgap6	exon	ENSMUSG00000031355	ProperStrand	74	chr5	121655032	121655062	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.3609
chr4	132937199	132937289	protein_coding	Slc9a1	intron	ENSMUSG00000028854	ProperStrand	28	chr11	97643010	97643090	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.8483
chr15	95780039	95780337	protein_coding	Ano6	exon	ENSMUSG00000064210	ProperStrand	39	chr19	8963027	8963089	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.0232
chr8	44381866	44385982	protein_coding	Zfp42	utr5	ENSMUSG00000051176	ProperStrand	127	chr19	8800355	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-2.2126
chr16	45738767	45738847	protein_coding	Abhd10	intron	ENSMUSG00000033157	ProperStrand	4	chr16	45656750	45656840	protein_coding	Tmprss7	intron	ENSMUSG00000033177	NonProperStrand	1	1	-inf
chr13	58495501	58495854	protein_coding	Hnrnpk	exon	ENSMUSG00000021546	ProperStrand	117	chr5	130295415	130295495	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-3.9715
chr9	4263963	4263990	LTR	MMERVK10C-int	ERVK	chr9MMERVK10C-int4262081	ProperStrand	1	chr2	138188029	138188045	protein_coding	Btbd3	intron	ENSMUSG00000062098	NonProperStrand	121	1	-inf
chr4	151370183	151370268	protein_coding	Phf13	utr5	ENSMUSG00000047777	ProperStrand	38	chr7	111488605	111488622	protein_coding	Trim12c	utr3	ENSMUSG00000057143	ProperStrand	28	1	-15.7827
chr19	57004626	57004657	protein_coding	Afap1l2	exon	ENSMUSG00000025083	ProperStrand	8	chr11	116938589	116938689	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-10.2670
chr2	22444293	22445135	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	chr8	129468745	129468878	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	4	-2.0531
chr7	133637318	133641664	protein_coding	Atxn2l	exon	ENSMUSG00000032637	ProperStrand	219	chr11	6428088	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	7	-10.4873
chr15	82725599	82725636	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	chr19	8799033	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-1.5323
chr9	56775853	56775870	protein_coding	Snx33	utr5	ENSMUSG00000032733	NonProperStrand	116	chr7	52157066	52158135	protein_coding	Ap2a1	exon	ENSMUSG00000060279	ProperStrand	193	1	-9.6468
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr8	84531362	84531379	protein_coding	Inpp4b	intron	ENSMUSG00000037940	NonProperStrand	33	1	-8.9961
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr15	58577335	58577351	protein_coding	Fer1l6	intron	ENSMUSG00000037106	ProperStrand	54	1	-6.1111
chr12	85684116	85684206	protein_coding	Zfp410	utr3	ENSMUSG00000042472	ProperStrand	6	chr9	15119640	15119720	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-7.1405
chr15	76736620	76736720	protein_coding	Rpl8	utr3	ENSMUSG00000003970	ProperStrand	191	chr15	83209613	83210156	protein_coding	Pacsin2	exon	ENSMUSG00000016664	ProperStrand	30	1	-12.3918
chr16	10688588	10688633	protein_coding	Clec16a	exon	ENSMUSG00000068663	ProperStrand	24	chr8	32260335	32260421	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	3	-14.7871
chr12	34068691	34068707	lincRNA	4930556N08Rik	exon	ENSMUSG00000085664	NonProperStrand	6	chr11	100366189	100366271	protein_coding	Acly	exon	ENSMUSG00000020917	ProperStrand	183	3	-19.3999
chr17	4701811	4701829	DNA	Charlie1a	MER1_type	chr17Charlie1a4701809	ProperStrand	1	chr8	108233712	108233729	protein_coding	4933405L10Rik	exon	ENSMUSG00000013158	ProperStrand	94	1	-inf
chr15	7141068	7141158	protein_coding	Lifr	exon	ENSMUSG00000054263	ProperStrand	64	chr4	131865856	131865936	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.6688
chr8	126829606	126829623	antisense	1810008B01Rik	.	ENSMUSG00000089745	ProperStrand	10	chrX	163645405	163645459	protein_coding	Tmsb4x	utr3	ENSMUSG00000049775	ProperStrand	11	1	-19.8944
chr5	124567301	124567352	protein_coding	Arl6ip4	exon	ENSMUSG00000029404	ProperStrand	29	chr10	62348304	62348320	protein_coding	Tet1	intron	ENSMUSG00000047146	NonProperStrand	7	1	-19.6087
chr18	77952584	77952601	protein_coding	8030462N17Rik	utr5	ENSMUSG00000047466	NonProperStrand	21	chr15	79908974	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-7.5631
chr9	21823257	21823273	protein_coding	Elavl3	exon	ENSMUSG00000003410	NonProperStrand	137	chr19	8800084	8800110	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-5.9746
chr7	20281654	20281759	protein_coding	Apoe	utr3	ENSMUSG00000002985	ProperStrand	231	chr4	131865855	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-1.1323
chr12	4886623	4886642	protein_coding	Ubxn2a	utr3	ENSMUSG00000020634	ProperStrand	8	chr19	8963082	8963212	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-6.1145
chr7	50930718	50930818	protein_coding	Ctu1	exon	ENSMUSG00000038888	ProperStrand	1	chr17	24857784	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-inf
chr1	88252633	88252699	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chr5	111121066	111121143	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-1.1426
chr6	81913994	81914017	protein_coding	Mrpl19	exon	ENSMUSG00000030045	ProperStrand	4	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-8.2228
chr1	13165038	13165057	protein_coding	Ncoa2	exon	ENSMUSG00000005886	NonProperStrand	9	chr4	129932708	129932753	protein_coding	Serinc2	exon	ENSMUSG00000023232	ProperStrand	5	1	-18.8319
chr16	96391529	96391613	protein_coding	Lca5l	intron	ENSMUSG00000045275	NonProperStrand	210	chr11	62418013	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-3.1891
chr11	118271689	118271739	protein_coding	Cant1	intron	ENSMUSG00000025575	ProperStrand	22	chr7	116664794	116664884	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	5	-18.2861
chr9	54734325	54734341	protein_coding	Ireb2	exon	ENSMUSG00000032293	NonProperStrand	2	chr1	89673735	89673767	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-10.5460
chr11	97372833	97372849	protein_coding	Srcin1	utr3	ENSMUSG00000038453	NonProperStrand	21	chr8	106914091	106914110	protein_coding	Cmtm4	intron	ENSMUSG00000051578	ProperStrand	6	1	-18.9453
chr13	120255742	120258335	protein_coding	4833420G17Rik	exon	ENSMUSG00000062822	ProperStrand	49	chr11	98878341	98878371	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-6.6859
chr18	78033399	78033415	lincRNA	F830208F22Rik	exon	ENSMUSG00000073529	ProperStrand	16	chr10	90432660	90432679	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	1	-13.3054
chr8	124907602	124907682	protein_coding	Zc3h18	exon	ENSMUSG00000017478	ProperStrand	55	chr4	122968615	122968705	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	2	-10.4453
chr11	68886928	68887018	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	chr7	67123693	67123757	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	1	-1.0271
chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	chr11	62416951	62416976	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-1.4384
chr17	35089182	35089231	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	5	-0.7086
chr17	45571008	45571098	lincRNA	B230354K17Rik	exon	ENSMUSG00000073393	ProperStrand	11	chr11	62416575	62416641	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	3	-19.0207
chr9	40610681	40610886	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr11	6519865	6519945	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-2.9700
chr2	32818840	32818941	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	chrX	34622906	34623025	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	21	-2.0974
chr19	15979672	15979746	protein_coding	Psat1	utr3	ENSMUSG00000024640	ProperStrand	33	chr7	150717298	150717323	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-6.6884
chr1	191646533	191648966	protein_coding	Ptpn14	exon	ENSMUSG00000026604	ProperStrand	74	chr4	131908261	131908341	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-2.2034
chr1	72896147	72896168	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	chrX	84483699	84483734	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-4.4991
chr2	51976580	51976670	protein_coding	Rif1	exon	ENSMUSG00000036202	ProperStrand	201	chr5	74489595	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-1.6970
chr9	48241068	48241084	DNA	Cheshire	MER1_type	chr9Cheshire48240856	ProperStrand	17	chr4	131826043	131826125	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	1	-11.7765
chr1	78438765	78438781	protein_coding	Farsb	intron	ENSMUSG00000026245	ProperStrand	40	chr3	35725890	35725907	protein_coding	Atp11b	exon	ENSMUSG00000037400	NonProperStrand	18	1	-16.5296
chr4	10918406	10918494	protein_coding	Plekhf2	utr5	ENSMUSG00000049969	ProperStrand	12	chr5	147646734	147646797	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	1	-11.2333
chr11	4666283	4666314	protein_coding	Nf2	utr3	ENSMUSG00000009073	ProperStrand	72	chr2	26494742	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.7830
chr8	127998772	127998862	protein_coding	Sipa1l2	exon	ENSMUSG00000001995	ProperStrand	37	chr9	120037934	120038014	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	2	-9.2429
chr4	53873599	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	chr7	150717335	150717425	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	3	-4.7537
chr9	40126912	40127002	protein_coding	Gramd1b	intron	ENSMUSG00000040111	NonProperStrand	12	chr9	40216707	40216787	protein_coding	Gramd1b	intron	ENSMUSG00000040111	ProperStrand	40	1	-17.4468
chr1	107743299	107743317	protein_coding	Tnfrsf11a	utr3	ENSMUSG00000026321	NonProperStrand	100	chr11	97698873	97698972	protein_coding	Lasp1	utr3	ENSMUSG00000038366	ProperStrand	65	4	-inf
chr17	66202095	66202129	protein_coding	Ralbp1	exon	ENSMUSG00000024096	ProperStrand	39	chr4	116827120	116827167	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-7.9010
chr16	21475392	21477619	protein_coding	Vps8	exon	ENSMUSG00000033653	ProperStrand	27	chr7	117166781	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-6.3852
chr1	10850103	10850122	LINE	Lx8	L1	chr1Lx810849515	NonProperStrand	1	chr2	130103432	130103483	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-inf
chr9	56366040	56366130	LINE	L1_Mus1	L1	chr9L1_Mus156365823	ProperStrand	1	chr9	56365623	56365713	SINE	B2_Mm2	B2	chr9B2_Mm256365626	ProperStrand	1	1	-inf
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr19	8800355	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-1.1600
chr2	32563527	32563544	protein_coding	Cdk9	exon	ENSMUSG00000009555	NonProperStrand	49	chr11	69481334	69481380	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.5713
chr8	25920545	25921169	protein_coding	Adam5	exon	ENSMUSG00000031554	ProperStrand	49	chr8	73419662	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.4996
chr2	139986171	139986189	protein_coding	Esf1	exon	ENSMUSG00000045624	NonProperStrand	3	chr7	148634803	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-10.2358
chr18	60954109	60954199	LTR	MTC	MaLR	chr18MTC60954020	NonProperStrand	1	chr18	60954337	60954427	SINE	B3A	B2	chr18B3A60954331	NonProperStrand	1	1	-inf
chr7	150699822	150699922	protein_coding	Nap1l4	utr3	ENSMUSG00000059119	ProperStrand	31	chr18	33954922	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-4.7567
chr12	110854165	110881114	lincRNA	Rian	intron	ENSMUSG00000091793	ProperStrand	612	chr7	116663658	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	5	-1.0474
chr3	149640117	149640205	LINE	L1Md_A	L1	chr3L1Md_A149639191	ProperStrand	1	chr9	19462414	19462504	LINE	L1Md_A	L1	chr9L1Md_A19461964	ProperStrand	81	1	-inf
chr11	48617704	48619064	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	chr9	120039589	120039622	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	4	-3.4766
chr6	51414110	51414126	protein_coding	Hnrnpa2b1	exon	ENSMUSG00000004980	ProperStrand	166	chr7	117189957	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-1.6192
chr15	100523455	100523521	protein_coding	Galnt6	utr3	ENSMUSG00000037280	ProperStrand	4	chr1	155287312	155287355	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	1	-14.6473
chr13	101541068	101541090	protein_coding	Cenph	intron	ENSMUSG00000045273	NonProperStrand	45	chr7	29136525	29136575	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-4.9855
chr11	77996341	77996397	protein_coding	Rpl23a	exon	ENSMUSG00000058546	ProperStrand	121	chr17	24343586	24343602	protein_coding	Ntn3	exon	ENSMUSG00000079662	ProperStrand	237	1	-9.1524
chr7	36948198	36948214	LTR	MTD	MaLR	chr7MTD36948103	NonProperStrand	1	chr18	73693106	73693129	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-inf
chr2	26447688	26447704	protein_coding	Egfl7	exon	ENSMUSG00000026921	NonProperStrand	7	chr4	116230385	116230401	protein_coding	Gpbp1l1	utr5	ENSMUSG00000034042	NonProperStrand	106	1	-16.5332
chr7	31402163	31408505	protein_coding	Cox6b1	exon	ENSMUSG00000036751	ProperStrand	23	chr18	35716685	35716765	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.8840
chr15	51682853	51682918	protein_coding	Eif3h	intron	ENSMUSG00000022312	ProperStrand	45	chr10	23505177	23505267	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-3.0673
chr4	43505659	43505714	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr8	10592076	10592093	protein_coding	Myo16	intron	ENSMUSG00000039057	NonProperStrand	45	1	-3.5955
chr1	162968214	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	chr2	130102054	130102110	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	5	-2.9807
chr7	108440949	108440967	protein_coding	Atg16l2	intron	ENSMUSG00000047767	ProperStrand	121	chr11	74991649	74991666	protein_coding	Dph1	utr3	ENSMUSG00000078789	NonProperStrand	8	1	-15.9844
chr8	107783510	107783527	protein_coding	Tradd	exon	ENSMUSG00000031887	ProperStrand	23	chr4	131908236	131908344	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-5.2237
chr5	89089258	89089290	protein_coding	Grsf1	utr3	ENSMUSG00000044221	ProperStrand	24	chr7	116664850	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-4.2269
chr11	77994779	77994846	protein_coding	Rpl23a	intron	ENSMUSG00000058546	ProperStrand	121	chr7	117189946	117190046	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.1145
chr13	97946176	97946245	protein_coding	Gfm2	utr3	ENSMUSG00000021666	ProperStrand	26	chr1	155287307	155287354	snoRNA	ENSMUSG00000064435_SNORA4	.	ENSMUSG00000064435	ProperStrand	263	1	-12.0427
chr7	4744785	4744827	protein_coding	Rpl28	utr5	ENSMUSG00000030432	ProperStrand	220	chr9	15119666	15119763	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-0.7328
chr9	25059948	25115215	protein_coding	Sept7	utr3	ENSMUSG00000001833	ProperStrand	101	chr16	23110852	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-2.1019
chr16	38089900	38090000	protein_coding	Gsk3b	utr5	ENSMUSG00000022812	ProperStrand	80	chr3	85942714	85942780	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	1	-9.1412
chr9	53279517	53279585	protein_coding	Atm	exon	ENSMUSG00000034218	ProperStrand	17	chr18	35714168	35714256	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-5.8775
chr17	24856708	24856773	antisense	Snhg9	.	ENSMUSG00000090101	ProperStrand	218	chr7	29136633	29136654	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-1.2455
chr10	27925956	27925988	protein_coding	Ptprk	exon	ENSMUSG00000019889	ProperStrand	45	chr17	35299507	35299580	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	2	-8.7641
chr6	120854603	120854630	protein_coding	Bid	intron	ENSMUSG00000004446	NonProperStrand	3	chr10	39978402	39978482	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	NonProperStrand	27	2	-23.7371
chr6	119875902	119875997	protein_coding	Wnk1	utr3	ENSMUSG00000045962	ProperStrand	221	chr11	97642952	97643093	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	6	-6.0830
chr13	9833566	9833655	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr17	29469112	29469187	protein_coding	Mtch1	utr3	ENSMUSG00000024012	ProperStrand	13	2	-12.8889
chr17	24343586	24343602	protein_coding	Ntn3	exon	ENSMUSG00000079662	ProperStrand	237	chr15	79908929	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	2	-5.0120
chr2	80297373	80297389	LINE	L1MB8	L1	chr2L1MB880297262	ProperStrand	53	chr13	60863471	60863494	protein_coding	Dapk1	utr3	ENSMUSG00000021559	ProperStrand	109	1	-12.3641
chr2	84530865	84531297	protein_coding	Zdhhc5	exon	ENSMUSG00000034075	NonProperStrand	144	chr2	130102052	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-3.6889
chr10	88231302	88231319	protein_coding	Utp20	intron	ENSMUSG00000004356	ProperStrand	45	chr19	8800353	8800471	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	NonProperStrand	18	1	-16.2882
chr8	13940121	13940163	protein_coding	Fbxo25	utr3	ENSMUSG00000038365	ProperStrand	7	chr9	40612831	40612870	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	2	-21.1761
chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-6.5679
chr19	41158795	41160715	protein_coding	Tll2	exon	ENSMUSG00000025013	ProperStrand	8	chr14	76247708	76247768	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-8.2107
chr13	101165960	101165977	LTR	MMERVK10C-int	ERVK	chr13MMERVK10C-int101165915	ProperStrand	1	chr19	8963129	8963179	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-inf
chr11	119971474	119971491	protein_coding	Slc38a10	exon	ENSMUSG00000061306	ProperStrand	91	chr4	131866155	131866245	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-2.9093
chr9	15119738	15119770	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	chr9	51895694	51895794	protein_coding	Rdx	utr3	ENSMUSG00000032050	ProperStrand	60	1	-9.7072
chr5	73697848	73697931	protein_coding	Ociad1	exon	ENSMUSG00000029152	ProperStrand	51	chr16	23111376	23111466	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.4898
chr4	134903049	134903113	protein_coding	Srrm1	exon	ENSMUSG00000028809	ProperStrand	142	chr1	39605591	39605682	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-5.6443
chr9	22465568	22465585	protein_coding	Bbs9	intron	ENSMUSG00000035919	ProperStrand	51	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-5.5288
chr9	59161607	59162549	protein_coding	Adpgk	exon	ENSMUSG00000025236	ProperStrand	19	chr4	131865476	131865516	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-6.2464
chr2	32503995	32504028	protein_coding	Eng	intron	ENSMUSG00000026814	ProperStrand	29	chr14	76247754	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-5.5803
chr18	73693162	73693189	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr19	8799386	8799433	snoRNA	ENSMUSG00000065280_SNORD28	.	ENSMUSG00000065280	ProperStrand	269	2	-4.7394
chr9	120041156	120041172	protein_coding	Rpsa	utr3	ENSMUSG00000032518	ProperStrand	398	chr15	103074203	103074449	protein_coding	Hnrnpa1	exon	ENSMUSG00000046434	ProperStrand	68	1	-9.2724
chr16	16879506	16882602	protein_coding	Top3b	exon	ENSMUSG00000022779	ProperStrand	36	chr7	118219574	118219638	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	4	-16.0821
chr13	97905555	97905645	protein_coding	Nsa2	exon	ENSMUSG00000060739	ProperStrand	9	chr15	34370573	34370653	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-11.8790
chr1	89102787	89103056	protein_coding	Chrng	exon	ENSMUSG00000026253	ProperStrand	6	chr11	69483178	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-6.9324
chr3	99003131	99003159	protein_coding	Wars2	intron	ENSMUSG00000004233	NonProperStrand	48	chr11	68886978	68887058	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-4.5693
chr7	150429747	150429763	protein_coding	Kcnq1	intron	ENSMUSG00000009545	NonProperStrand	133	chr8	127353807	127353824	protein_coding	Trim67	utr3	ENSMUSG00000036913	NonProperStrand	8	1	-15.8314
chr14	87402666	87402692	protein_coding	Diap3	exon	ENSMUSG00000022021	ProperStrand	15	chr14	33005038	33005085	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-6.7159
chr17	4082264	4082290	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr7	150717314	150717425	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-2.4142
chr14	76526084	76526100	protein_coding	Nufip1	exon	ENSMUSG00000022009	ProperStrand	12	chr5	108336410	108336495	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-8.1013
chrX	102999132	102999187	protein_coding	Atrx	exon	ENSMUSG00000031229	ProperStrand	54	chr2	169663136	169663155	protein_coding	Tshz2	intron	ENSMUSG00000047907	ProperStrand	14	1	-16.5633
chr12	93481905	93481985	LTR	RMER16	ERVK	chr12RMER1693481879	ProperStrand	1	chr14	34781269	34781359	protein_coding	Zfp488	utr3	ENSMUSG00000044519	ProperStrand	54	1	-inf
chr4	124796957	124796975	protein_coding	Zc3h12a	exon	ENSMUSG00000042677	ProperStrand	37	chr16	23110827	23110979	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.6429
chr11	78313939	78313956	protein_coding	Vtn	exon	ENSMUSG00000017344	ProperStrand	188	chr4	116827121	116827180	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-4.8050
chrX	7472894	7472974	protein_coding	Pqbp1	exon	ENSMUSG00000031157	ProperStrand	22	chr11	60350689	60350779	protein_coding	Alkbh5	intron	ENSMUSG00000042650	ProperStrand	203	1	-12.9019
chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	chr9	39882020	39882036	protein_coding	Olfr982	exon	ENSMUSG00000049010	NonProperStrand	35	1	-11.8518
chr6	97253835	97253854	protein_coding	Frmd4b	intron	ENSMUSG00000030064	NonProperStrand	25	chr11	4774341	4774384	protein_coding	Nipsnap1	intron	ENSMUSG00000034285	ProperStrand	15	1	-17.8450
chr7	31895791	31899711	protein_coding	Hpn	utr5	ENSMUSG00000001249	ProperStrand	126	chr2	144087414	144087463	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-5.0928
chr2	144317591	144317608	pseudogene	Zfp133-ps	.	ENSMUSG00000083674	ProperStrand	5	chr9	15119632	15119693	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-12.4515
chr11	6428054	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr3	85942713	85942776	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	9	-10.3721
chr7	136800631	136800649	SINE	RSINE1	B4	chr7RSINE1136800606	ProperStrand	216	chr1	162967734	162967806	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	1	-7.6878
chr11	54886425	54886442	protein_coding	Ccdc69	intron	ENSMUSG00000049588	NonProperStrand	1	chr11	6428092	6428157	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-inf
chr12	114290175	114290191	protein_coding	Pacs2	intron	ENSMUSG00000021143	NonProperStrand	302	chr5	108333572	108333625	snoRNA	ENSMUSG00000064453_Snord21	.	ENSMUSG00000064453	ProperStrand	201	1	-7.6593
chr7	30231465	30231593	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	chr1	153770028	153770045	protein_coding	1700025G04Rik	intron	ENSMUSG00000032666	ProperStrand	25	1	-10.6148
chr16	37777389	37777408	protein_coding	Fstl1	exon	ENSMUSG00000022816	ProperStrand	179	chr9	40612123	40612148	snoRNA	ENSMUSG00000075924_Snord14d	.	ENSMUSG00000075924	ProperStrand	131	1	-9.5539
chr4	84226455	84226478	protein_coding	Bnc2	intron	ENSMUSG00000028487	ProperStrand	76	chr11	83138180	83146509	protein_coding	Ap2b1	exon	ENSMUSG00000035152	ProperStrand	60	1	-12.8397
chr8	112140270	112140286	protein_coding	Pkd1l3	exon	ENSMUSG00000048827	ProperStrand	4	chr2	32818887	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-11.0985
chr5	32954069	32954127	protein_coding	Yes1	exon	ENSMUSG00000014932	ProperStrand	11	chr7	116664842	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-9.5428
chr17	12585979	12585995	protein_coding	Plg	exon	ENSMUSG00000059481	ProperStrand	86	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.9395
chr14	70590545	70590636	protein_coding	Sorbs3	exon	ENSMUSG00000022091	ProperStrand	1	chr4	44139834	44139850	protein_coding	Rnf38	utr3	ENSMUSG00000035696	ProperStrand	66	1	-inf
chr17	24858097	24858187	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr8	98270015	98270095	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-2.1838
chr7	31895791	31899711	protein_coding	Hpn	utr5	ENSMUSG00000001249	ProperStrand	126	chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	1	-11.0766
chr10	41644311	41644329	protein_coding	Armc2	exon	ENSMUSG00000071324	ProperStrand	281	chr5	121655015	121655126	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-1.1933
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr9	15118247	15118364	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	3	-3.4676
chr4	129936017	129937889	protein_coding	Serinc2	exon	ENSMUSG00000023232	NonProperStrand	5	chr17	24857717	24857851	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	4	-19.4831
chr2	131387542	131387561	antisense	Gm14285	.	ENSMUSG00000087524	ProperStrand	2	chr4	131908356	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-8.3123
chr14	66598604	66598670	protein_coding	Clu	exon	ENSMUSG00000022037	ProperStrand	9	chr16	23110907	23110997	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-8.1007
chrX	160347488	160347504	protein_coding	Ap1s2	intron	ENSMUSG00000031367	ProperStrand	52	chr2	26493366	26493474	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-4.0106
chr13	9833564	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr9	63869769	63869788	protein_coding	Smad6	utr5	ENSMUSG00000036867	NonProperStrand	637	1	-0.9633
chr8	87201020	87201094	protein_coding	Nacc1	exon	ENSMUSG00000001910	ProperStrand	130	chr16	92080813	92080829	protein_coding	Slc5a3	utr3	ENSMUSG00000089774	NonProperStrand	4	2	-19.5390
chr1	34323973	34324002	protein_coding	Dst	intron	ENSMUSG00000026131	ProperStrand	461	chr5	135884630	135884646	protein_coding	Hip1	utr3	ENSMUSG00000039959	NonProperStrand	23	1	-11.1700
chr1	102076742	102076791	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	chr5	121655065	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	5	-5.0219
chr8	85933548	85933567	protein_coding	Clgn	exon	ENSMUSG00000002190	ProperStrand	6	chr5	130300507	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-7.0019
chr4	122968589	122968679	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	chr1	162966211	162966241	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-1.1854
chr2	13500074	13500244	protein_coding	Vim	exon	ENSMUSG00000026728	ProperStrand	33	chr19	8800356	8800436	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-4.6611
chr9	79673220	79673236	protein_coding	Filip1	intron	ENSMUSG00000034898	ProperStrand	6	chr14	122420050	122420099	protein_coding	Ubac2	utr3	ENSMUSG00000041765	ProperStrand	25	1	-18.9810
chr4	74926518	74926572	snoRNA	ENSMUSG00000065884_SNORA63	.	ENSMUSG00000065884	ProperStrand	12	chr1	162966813	162966846	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	3	-20.7232
chr3	155715360	155715382	LINE	Lx4A	L1	chr3Lx4A155714407	NonProperStrand	9	chr16	23110842	23110910	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.9939
chr12	81891640	81891761	protein_coding	4933426M11Rik	utr5	ENSMUSG00000021133	ProperStrand	23	chr1	162967530	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-5.3087
chrX	103105307	103105326	protein_coding	Atrx	intron	ENSMUSG00000031229	ProperStrand	54	chr15	34370545	34370668	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-3.7446
chr2	143773500	143773516	protein_coding	Rrbp1	utr3	ENSMUSG00000027422	NonProperStrand	20	chr14	76247725	76247831	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-6.3209
chr8	87493597	87494151	protein_coding	Prdx2	utr5	ENSMUSG00000005161	ProperStrand	20	chr7	150717298	150717367	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	6	-inf
chr11	83775984	83776074	protein_coding	Ddx52	utr3	ENSMUSG00000020677	ProperStrand	9	chrX	71589885	71589904	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	1	-14.0357
chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	chr16	20684341	20684372	snoRNA	ENSMUSG00000077239_Snord66	.	ENSMUSG00000077239	ProperStrand	159	1	-8.3258
chr6	120432385	120432401	protein_coding	Il17ra	exon	ENSMUSG00000002897	ProperStrand	61	chr4	116827870	116827892	snoRNA	ENSMUSG00000064751_SNORD46	.	ENSMUSG00000064751	ProperStrand	132	2	-17.8456
chr11	52197506	52197546	protein_coding	Vdac1	exon	ENSMUSG00000020402	ProperStrand	107	chr15	89135830	89135863	protein_coding	Sbf1	exon	ENSMUSG00000036529	ProperStrand	85	1	-11.4510
chr11	23161964	23167759	protein_coding	Xpo1	exon	ENSMUSG00000020290	ProperStrand	123	chr19	8799063	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	2	-7.3892
chr2	35575612	35575702	protein_coding	Dab2ip	exon	ENSMUSG00000026883	ProperStrand	93	chr9	15119646	15119726	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.9013
chr7	30231503	30231593	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	NonProperStrand	19	chr11	6428077	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	NonProperStrand	91	2	-19.4162
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	1	-4.0145
chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	2	-6.3944
chr5	35147274	35147308	protein_coding	Htt	exon	ENSMUSG00000029104	ProperStrand	73	chr14	31827477	31827545	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-6.5559
chr8	72432561	72432637	protein_coding	Gatad2a	utr3	ENSMUSG00000036180	ProperStrand	112	chr16	35645505	35645523	protein_coding	Sema5b	exon	ENSMUSG00000052133	ProperStrand	9	1	-15.9721
chr19	30206243	30249680	protein_coding	Gldc	exon	ENSMUSG00000024827	ProperStrand	175	chr19	8800355	8800444	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	3	-4.8307
chr14	21281891	21281909	protein_coding	Anxa7	exon	ENSMUSG00000021814	ProperStrand	20	chr7	52071775	52071795	protein_coding	Il4i1	utr5	ENSMUSG00000074141	ProperStrand	12	1	-18.9596
chr9	65049532	65049625	snRNA	ENSMUSG00000075930_U5	.	ENSMUSG00000075930	ProperStrand	175	chr1	89681330	89681396	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-3.4108
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr11	120148960	120148976	protein_coding	Bahcc1	exon	ENSMUSG00000039741	NonProperStrand	268	1	-5.7516
chr4	116230385	116230401	protein_coding	Gpbp1l1	utr5	ENSMUSG00000034042	NonProperStrand	106	chr13	115879994	115880010	protein_coding	Pelo	exon	ENSMUSG00000042275	NonProperStrand	1	1	-inf
chr10	126955562	126955593	protein_coding	Shmt2	exon	ENSMUSG00000025403	ProperStrand	94	chr11	69481383	69481432	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-2.4130
chr6	136646025	136646042	protein_coding	Gucy2c	utr3	ENSMUSG00000042638	ProperStrand	5	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-6.5022
chr12	12944235	12944251	protein_coding	Mycn	exon	ENSMUSG00000037169	NonProperStrand	109	chr11	97546474	97546495	protein_coding	Mllt6	utr3	ENSMUSG00000038437	ProperStrand	110	1	-10.8968
chr9	65502720	65502810	protein_coding	Rbpms2	intron	ENSMUSG00000032387	ProperStrand	85	chr11	120133236	120133316	protein_coding	Bahcc1	exon	ENSMUSG00000039741	ProperStrand	118	1	-11.2547
chr2	26766643	26766992	protein_coding	Rpl7a	exon	ENSMUSG00000062647	ProperStrand	234	chr8	73419681	73419771	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-0.9923
chr6	89268131	89268158	protein_coding	Plxna1	utr3	ENSMUSG00000030084	ProperStrand	233	chr19	46079316	46079332	protein_coding	Hps6	exon	ENSMUSG00000074811	ProperStrand	56	1	-10.7318
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-2.0135
chr16	38674236	38674254	protein_coding	Arhgap31	intron	ENSMUSG00000022799	NonProperStrand	6	chr9	120038547	120038652	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-7.6033
chr7	146768526	146768543	protein_coding	Nkx6-2	utr5	ENSMUSG00000041309	ProperStrand	3	chr17	24857698	24857828	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-8.3442
chrX	20527629	20527647	protein_coding	Elk1	utr5	ENSMUSG00000009406	NonProperStrand	3	chr4	59819657	59819674	protein_coding	Snx30	intron	ENSMUSG00000028385	ProperStrand	8	1	-20.4785
chr12	85761265	85761286	protein_coding	2900006K08Rik	intron	ENSMUSG00000057265	ProperStrand	2	chr2	26494767	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-10.3719
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr6	4552858	4552876	protein_coding	Casd1	intron	ENSMUSG00000015189	NonProperStrand	2	1	-13.3349
chr2	90235294	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr12	88488443	88496424	protein_coding	Pomt2	exon	ENSMUSG00000034126	NonProperStrand	331	6	-10.1680
chr13	94394798	94394815	protein_coding	Bhmt	exon	ENSMUSG00000074768	ProperStrand	1	chr1	162965531	162965585	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-inf
chr16	87425837	87425927	protein_coding	Ltn1	exon	ENSMUSG00000052299	ProperStrand	49	chr5	130300457	130300537	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.8625
chr9	44560316	44565211	protein_coding	Arcn1	exon	ENSMUSG00000032096	ProperStrand	35	chr11	62416600	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	4	-18.9250
chr11	102176184	102176213	protein_coding	Ubtf	exon	ENSMUSG00000020923	ProperStrand	66	chr7	116663634	116663724	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-4.1740
chr5	114814638	114814738	protein_coding	Kctd10	utr3	ENSMUSG00000001098	ProperStrand	3	chr15	82725610	82725629	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	1	-14.9053
chr1	152268927	152269668	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	chr11	106429851	106429875	protein_coding	Tex2	exon	ENSMUSG00000040548	ProperStrand	24	1	-10.7598
chr9	56983394	56984529	protein_coding	Man2c1	exon	ENSMUSG00000032295	ProperStrand	13	chr11	97642952	97642993	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-5.3468
chr9	42580760	42580860	protein_coding	Grik4	intron	ENSMUSG00000032017	ProperStrand	32	chr7	117190034	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.5139
chr11	115999916	115999932	protein_coding	Mrpl38	exon	ENSMUSG00000020775	NonProperStrand	65	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-9.2087
chr7	32164791	32164814	LTR	RMER4B	ERVK	chr7RMER4B32164648	NonProperStrand	1	chr16	23110909	23111002	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr10	127686735	127686815	protein_coding-noncoding	Timeless	utr5	ENSMUSG00000039994	NonProperStrand	1	chr10	127686612	127686788	protein_coding	Timeless	exon	ENSMUSG00000039994	NonProperStrand	4	1	-inf
chrX	7544961	7544977	protein_coding	Gata1	utr5	ENSMUSG00000031162	ProperStrand	30	chr1	162967491	162967541	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.7879
chr16	90386835	90386853	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	chr6	120467088	120468467	protein_coding	Cecr5	exon	ENSMUSG00000058979	ProperStrand	97	1	-11.2436
chr15	81733925	81733957	protein_coding	Aco2	exon	ENSMUSG00000022477	ProperStrand	237	chr1	134018692	134018903	protein_coding	Cdk18	exon	ENSMUSG00000026437	ProperStrand	51	1	-10.8861
chr17	36064009	36064916	protein_coding	Ppp1r10	exon	ENSMUSG00000039220	ProperStrand	45	chr18	33954920	33954943	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-4.0424
chr9	41907274	41907329	protein_coding	Sorl1	exon	ENSMUSG00000049313	ProperStrand	112	chr11	69483155	69483245	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.4601
chr11	32500864	32503675	protein_coding	Stk10	exon	ENSMUSG00000020272	NonProperStrand	73	chr15	79908957	79909019	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-5.0910
chrX	17839450	17839516	protein_coding	Kdm6a	exon	ENSMUSG00000037369	ProperStrand	19	chr5	130300420	130300510	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.6362
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr4	116827259	116827279	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	1	-4.1622
chr19	8799830	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	chr13	90238585	90238723	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	3	-3.1745
chr15	99538110	99538164	protein_coding	Smarcd1	exon	ENSMUSG00000023018	ProperStrand	43	chrX	34622991	34623035	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-3.7842
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr19	8800355	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	8	-8.7558
chr16	57391756	57391792	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr11	119142373	119142426	protein_coding	Gaa	intron	ENSMUSG00000025579	ProperStrand	149	1	-5.9926
chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	chr12	112779155	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-1.5092
chr1	138122170	138122187	protein_coding	5730559C18Rik	intron	ENSMUSG00000041605	NonProperStrand	22	chr9	120038467	120038529	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.9307
chr5	115848210	115848227	antisense	Gm13832	.	ENSMUSG00000087292	ProperStrand	47	chr17	24665420	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-5.4158
chr7	123476709	123476762	snoRNA	ENSMUSG00000064741_Snord14a	.	ENSMUSG00000064741	ProperStrand	83	chr13	90238585	90238666	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	1	-7.9982
chr11	4580183	4581479	protein_coding	Ascc2	exon	ENSMUSG00000020412	ProperStrand	27	chr16	36071984	36072000	protein_coding	Ccdc58	utr5	ENSMUSG00000075229	NonProperStrand	55	1	-15.1013
chr10	79706508	79706608	protein_coding	Mum1	utr3	ENSMUSG00000020156	ProperStrand	19	chr7	116664871	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-4.6802
chr4	43505816	43505906	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr10	70699739	70700606	protein_coding	Tfam	exon	ENSMUSG00000003923	ProperStrand	13	1	-6.0161
chr17	56457738	56459615	protein_coding	Uhrf1	exon	ENSMUSG00000001228	ProperStrand	229	chr10	114778018	114778083	protein_coding	Tmem19	utr3	ENSMUSG00000069520	ProperStrand	24	1	-12.4827
chr10	80119278	80119296	protein_coding	Btbd2	utr5	ENSMUSG00000003344	NonProperStrand	3	chr7	116663711	116663762	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-8.5982
chrX	106781795	106781811	LTR	RLTR21	ERVK	chrXRLTR21106781612	NonProperStrand	1	chr13	107737212	107737228	protein_coding	Dimt1	utr5	ENSMUSG00000021692	ProperStrand	185	1	-inf
chr8	87494380	87494401	protein_coding	Prdx2	exon	ENSMUSG00000005161	ProperStrand	20	chr4	56910496	56910547	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-8.3081
chr4	128788734	128788750	protein_coding	Tmem54	utr3	ENSMUSG00000028786	NonProperStrand	6	chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-12.4916
chr1	88252837	88252894	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	chr9	64023228	64023289	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	3	-5.7175
chr9	50276106	50276196	LINE	L1MA4A	L1	chr9L1MA4A50276055	NonProperStrand	1	chr9	50276381	50276461	LINE	L1MA4A	L1	chr9L1MA4A50276389	NonProperStrand	1	1	-inf
chr7	20300349	20300365	protein_coding	Tomm40	exon	ENSMUSG00000002984	ProperStrand	57	chr10	94959469	94959485	protein_coding	Mrpl42	exon	ENSMUSG00000062981	ProperStrand	9	1	-17.2523
chr7	29414728	29415877	protein_coding	C330005M16Rik	exon	ENSMUSG00000037469	ProperStrand	23	chr8	125626932	125627005	snoRNA	ENSMUSG00000064450_Snord68	.	ENSMUSG00000064450	ProperStrand	181	1	-13.0409
chr3	83967939	83967957	protein_coding	Trim2	utr3	ENSMUSG00000027993	ProperStrand	10	chr8	27081634	27082069	protein_coding	Hgsnat	exon	ENSMUSG00000037260	ProperStrand	41	1	-17.8397
chr5	140251469	140251485	protein_coding	Ints1	utr5	ENSMUSG00000029547	NonProperStrand	10	chr18	35716763	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-5.5279
chr7	141399351	141399367	protein_coding	Adam12	intron	ENSMUSG00000054555	NonProperStrand	49	chr4	131908380	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.7204
chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	chr2	32818884	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-1.9565
chr1	183047793	183050550	protein_coding	Nvl	exon	ENSMUSG00000026516	ProperStrand	89	chr10	23505168	23505206	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-0.7462
chr17	85482653	85489599	protein_coding	Prepl	utr5	ENSMUSG00000024127	ProperStrand	106	chr9	45203959	45203993	protein_coding	Fxyd6	utr3	ENSMUSG00000066705	ProperStrand	30	1	-13.5754
chr8	12757419	12757437	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr6	52965701	52965718	protein_coding	Jazf1	intron	ENSMUSG00000063568	ProperStrand	43	3	-inf
chr1	4482158	4482175	protein_coding	Sox17	exon	ENSMUSG00000025902	ProperStrand	1	chr12	88778723	88778768	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-inf
chr17	27240934	27241476	protein_coding	Itpr3	exon	ENSMUSG00000042644	ProperStrand	137	chr9	15119643	15119723	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	26	-20.6170
chr19	55573065	55573742	protein_coding	Vti1a	exon	ENSMUSG00000024983	ProperStrand	14	chr6	53829692	53829709	protein_coding	Cpvl	intron	ENSMUSG00000052955	ProperStrand	5	1	-20.6519
chr19	47332125	47332160	protein_coding	Neurl1a	utr3	ENSMUSG00000006435	ProperStrand	41	chr3	95980326	95980410	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	2	-12.2080
chr7	150466710	150466810	protein_coding	Kcnq1	intron	ENSMUSG00000009545	NonProperStrand	133	chr8	73419649	73419710	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	7	-13.9042
chr9	50870096	50870112	protein_coding	Layn	intron	ENSMUSG00000060594	ProperStrand	7	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-16.0904
chr11	79057915	79057983	protein_coding-noncoding	Wsb1	utr3	ENSMUSG00000017677	ProperStrand	5	chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	2	-20.9561
chr13	30338190	30338207	protein_coding	Mboat1	utr3	ENSMUSG00000038732	NonProperStrand	148	chr13	23626116	23626191	protein_coding	Hist1h2af	utr3	ENSMUSG00000061991	ProperStrand	7	1	-15.9030
chr17	34324656	34324673	protein_coding	Psmb9	utr5	ENSMUSG00000024337	ProperStrand	60	chr11	62416603	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-5.1663
chr19	44042976	44044494	protein_coding	Cpn1	exon	ENSMUSG00000025196	NonProperStrand	3	chr18	33954836	33954878	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	NonProperStrand	24	1	-inf
chr3	104094280	104094299	LTR	MTD	MaLR	chr3MTD104093949	NonProperStrand	6	chr3	122687242	122687285	protein_coding	Usp53	utr5	ENSMUSG00000039701	ProperStrand	5	1	-19.0115
chr10	114239021	114239044	antisense	Gm15723	.	ENSMUSG00000084865	ProperStrand	1	chr5	121655100	121655128	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-inf
chr3	101398146	101398971	protein_coding	Atp1a1	exon	ENSMUSG00000033161	ProperStrand	316	chr1	72301656	72301736	snRNA	ENSMUSG00000093333_AC120136.3	.	ENSMUSG00000093333	ProperStrand	68	1	-9.7326
chr2	121239793	121239847	protein_coding	Pdia3	exon	ENSMUSG00000027248	ProperStrand	74	chr6	145807212	145807228	protein_coding	Bhlhe41	utr3	ENSMUSG00000030256	NonProperStrand	3	1	-inf
chr19	23288649	23289139	protein_coding	Smc5	exon	ENSMUSG00000024943	ProperStrand	146	chr5	121655016	121655124	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.1773
chr16	20681562	20686355	protein_coding	Eif4g1	exon	ENSMUSG00000045983	ProperStrand	199	chr15	79913288	79913321	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-2.9039
chr15	78919994	78920023	protein_coding	Eif3l	exon	ENSMUSG00000033047	ProperStrand	81	chr9	75106911	75107001	protein_coding	Myo5c	intron	ENSMUSG00000033590	ProperStrand	7	1	-17.1925
chr5	25015773	25015791	SINE	ID_B1	B4	chr5ID_B125015696	ProperStrand	1	chr4	131865853	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr3	87719715	87719805	protein_coding	Hdgf	utr3	ENSMUSG00000004897	ProperStrand	117	chr2	144087333	144087413	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	11	-18.9763
chr12	77450905	77450922	protein_coding	Zbtb25	exon	ENSMUSG00000056459	ProperStrand	3	chr11	6428100	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-9.3720
chr10	116498573	116499106	protein_coding	Cct2	exon	ENSMUSG00000034024	ProperStrand	100	chr11	69483147	69483227	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.6273
chr1	168271787	168271877	LTR	RMER19B	ERVK	chr1RMER19B168271777	ProperStrand	1	chr1	168271646	168271736	LTR	RMER21B	ERV1	chr1RMER21B168271408	NonProperStrand	1	1	-inf
chr2	168580068	168580100	protein_coding	Sall4	exon	ENSMUSG00000027547	ProperStrand	82	chr6	21923892	21923972	protein_coding	Ing3	utr3	ENSMUSG00000029670	ProperStrand	6	2	-19.9070
chr12	17552943	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chrX	34622906	34623037	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	30	-4.1023
chr19	46784133	46786760	protein_coding	As3mt	exon	ENSMUSG00000003559	ProperStrand	10	chr7	117189863	117189924	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-9.8452
chr7	149170854	149171340	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	chr4	86232397	86232487	snoRNA	ENSMUSG00000088958_Scarna8	.	ENSMUSG00000088958	ProperStrand	366	5	-inf
chr9	78326470	78326971	protein_coding	Eef1a1	utr3	ENSMUSG00000037742	ProperStrand	1990	chr17	35089181	35089239	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	4	-1.5667
chr4	101291004	101291056	protein_coding	Dnajc6	exon	ENSMUSG00000028528	ProperStrand	10	chr7	148634780	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-7.5437
chr11	102042925	102043005	protein_coding	Lsm12	intron	ENSMUSG00000020922	ProperStrand	28	chr7	134176446	134176536	protein_coding	Kif22	exon	ENSMUSG00000030677	ProperStrand	63	1	-14.7564
chr14	76904453	76904469	protein_coding	Tsc22d1	utr5	ENSMUSG00000022010	ProperStrand	86	chr9	72566041	72566141	protein_coding	Nedd4	exon	ENSMUSG00000032216	ProperStrand	308	1	-9.3129
chr8	73989376	73989424	protein_coding	Mrpl34	utr3	ENSMUSG00000034880	ProperStrand	8	chr4	131908236	131908302	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-12.4254
chr6	116584610	116584626	protein_coding	Rassf4	utr3	ENSMUSG00000042129	NonProperStrand	11	chr5	108334195	108334322	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-8.2190
chr12	77733442	77733483	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	chr19	11015616	11015632	protein_coding	Gpr44	exon	ENSMUSG00000034117	NonProperStrand	118	1	-8.0922
chr17	95160908	95218242	protein_coding	2610044O15Rik	exon	ENSMUSG00000066057	NonProperStrand	70	chr5	121655017	121655155	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-5.8996
chr14	118925244	118925263	protein_coding	Abcc4	intron	ENSMUSG00000032849	NonProperStrand	24	chr15	98350221	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-6.5641
chr3	133130907	133130951	protein_coding	Tet2	exon	ENSMUSG00000040943	ProperStrand	192	chr15	34370545	34370617	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	3	-4.5506
chr10	6063958	6063978	protein_coding	Akap12	intron	ENSMUSG00000038587	ProperStrand	1008	chr9	65044377	65044493	snRNA	ENSMUSG00000075763_U5	.	ENSMUSG00000075763	ProperStrand	216	4	-15.8649
chr2	179322377	179322401	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr18	35716831	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-0.7098
chr11	101627985	101628053	protein_coding	Dhx8	exon	ENSMUSG00000034931	ProperStrand	48	chr8	98269959	98270010	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	5	-19.3208
chr15	34429185	34432084	protein_coding	Pop1	exon	ENSMUSG00000022325	ProperStrand	19	chr11	69481335	69481433	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.3947
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr18	73693114	73693139	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-1.5337
chr2	132134160	132134207	protein_coding	Cds2	utr3	ENSMUSG00000058793	ProperStrand	47	chr1	74902715	74902731	protein_coding	Cdk5r2	exon	ENSMUSG00000090071	NonProperStrand	49	1	-14.2250
chr5	74489230	74489320	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr3	32234002	32234087	protein_coding	Zmat3	utr3	ENSMUSG00000027663	ProperStrand	62	1	-5.5577
chr10	79281887	79281960	protein_coding	Palm	exon	ENSMUSG00000035863	ProperStrand	58	chr11	62418014	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-5.6235
chr8	13416897	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr5	149703214	149703290	protein_coding	Katnal1	exon	ENSMUSG00000041298	ProperStrand	14	3	-20.1784
chr2	156769832	156769906	protein_coding	Ndrg3	intron	ENSMUSG00000027634	ProperStrand	16	chr18	20761832	20761866	protein_coding	Dsg2	utr3	ENSMUSG00000044393	ProperStrand	60	1	-16.0227
chr5	108332751	108333798	protein_coding	Rpl5	exon	ENSMUSG00000058558	ProperStrand	235	chr4	131866159	131866283	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-2.6042
chr9	68901179	68901196	protein_coding	Rora	intron	ENSMUSG00000032238	NonProperStrand	30	chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	1	-12.8360
chr6	149277716	149277806	protein_coding	2810474O19Rik	exon	ENSMUSG00000032712	ProperStrand	70	chr9	120039540	120039620	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-5.2487
chr12	68768913	68769003	LINE	L1Md_F2	L1	chr12L1Md_F268768613	ProperStrand	13	chr3	46063846	46063937	LINE	L1Md_F2	L1	chr3L1Md_F246063863	ProperStrand	1	1	-inf
chr17	59135251	59135268	LTR	ORR1A2	MaLR	chr17ORR1A259135069	NonProperStrand	12	chr9	108594650	108594669	protein_coding	Prkar2a	utr5	ENSMUSG00000032601	ProperStrand	43	1	-17.4130
chr13	23775649	23775742	protein_coding	Hist1h2ac	exon	ENSMUSG00000069270	ProperStrand	22	chr16	23110989	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.4786
chr17	35036067	35036085	protein_coding	Ehmt2	exon	ENSMUSG00000013787	NonProperStrand	5	chr11	6519845	6519943	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	2	-20.3367
chr8	91566521	91566569	protein_coding	Sall1	intron	ENSMUSG00000031665	ProperStrand	96	chr2	165177944	165177960	protein_coding	Zfp663	exon	ENSMUSG00000056824	ProperStrand	12	1	-15.6645
chr8	89366160	89366249	protein_coding	N4bp1	utr3	ENSMUSG00000031652	ProperStrand	98	chr11	62418035	62418087	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-4.6075
chr17	66198426	66198516	protein_coding	Ralbp1	utr3	ENSMUSG00000024096	ProperStrand	39	chr10	23505187	23505267	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.8710
chr11	52197382	52197406	protein_coding	Vdac1	exon	ENSMUSG00000020402	ProperStrand	107	chr3	19528533	19528550	protein_coding	1700064H15Rik	exon	ENSMUSG00000082766	NonProperStrand	78	1	-11.6241
chr8	87198715	87198753	protein_coding	Nacc1	exon	ENSMUSG00000001910	ProperStrand	130	chr12	106269446	106269557	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-2.7300
chr2	146125210	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	chr11	97642951	97643068	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-1.6828
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr1	95206526	95206616	protein_coding	Pask	utr3	ENSMUSG00000026274	ProperStrand	20	4	-20.1478
chr13	96247406	96248477	protein_coding	S100z	exon	ENSMUSG00000021679	NonProperStrand	43	chr4	152856778	152856794	protein_coding	Ajap1	utr5	ENSMUSG00000039546	ProperStrand	51	1	-14.3277
chr2	158205377	158205405	snoRNA	ENSMUSG00000064585_SNORA71	.	ENSMUSG00000064585	ProperStrand	418	chr15	79908930	79909019	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-1.9428
chr19	8963031	8963164	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	chr12	110874223	110874291	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	8	-5.9159
chr2	90235301	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr3	127599006	127599023	protein_coding	5730508B09Rik	exon	ENSMUSG00000050549	ProperStrand	9	1	-8.2671
chr2	90235315	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	88961570	88964982	protein_coding	Klraq1	exon	ENSMUSG00000034709	NonProperStrand	11	1	-7.8469
chr6	82693943	82694033	protein_coding	Hk2	exon	ENSMUSG00000000628	ProperStrand	88	chr16	23111407	23111487	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.7796
chr4	107777683	107777773	protein_coding	Scp2	exon	ENSMUSG00000028603	ProperStrand	23	chr12	109345120	109345179	protein_coding	Setd3	utr3	ENSMUSG00000056770	ProperStrand	21	1	-17.1449
chr10	79174555	79174634	protein_coding	Bsg	utr3	ENSMUSG00000023175	ProperStrand	107	chr7	117189957	117190047	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.3176
chr6	86896876	86896966	protein_coding	Aak1	exon	ENSMUSG00000057230	ProperStrand	22	chr11	69481336	69481416	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.1045
chr4	88794155	88797925	protein_coding	Mtap	exon	ENSMUSG00000062937	ProperStrand	10	chr10	39978350	39978440	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-9.0784
mmu-miR-690	2	22	miRNA	mmu-miR-690	.	mmu-miR-690	ProperStrand	63	chr4	131908236	131908809	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	6	-9.7301
chr7	143781768	143781784	LINE	Lx9	L1	chr7Lx9143781715	ProperStrand	23	chr11	62416597	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-7.0660
chr12	111933881	111934468	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr13	51743564	51743643	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	2	-3.8268
chr5	113919913	113919930	protein_coding	Wscd2	utr5	ENSMUSG00000085571	NonProperStrand	40	chr8	73419713	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.8776
chr2	20612207	20612293	protein_coding	Etl4	intron	ENSMUSG00000036617	ProperStrand	86	chr9	64022856	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-7.3078
chr11	23156344	23156444	protein_coding	Xpo1	utr5	ENSMUSG00000020290	ProperStrand	123	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.2574
chr16	31275011	31275030	protein_coding	Ppp1r2	exon	ENSMUSG00000047714	ProperStrand	10	chr7	150717298	150717424	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-9.1270
chr8	111621099	111621116	lincRNA	D030068K23Rik	intron	ENSMUSG00000085859	ProperStrand	21	chr15	12110620	12113777	protein_coding	Zfr	exon	ENSMUSG00000022201	ProperStrand	48	1	-15.8761
chr2	130276244	130329242	protein_coding	Ptpra	utr5	ENSMUSG00000027303	ProperStrand	24	chr12	112779148	112779238	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	4	-19.0165
chr15	38226535	38226596	protein_coding	Klf10	exon	ENSMUSG00000037465	ProperStrand	33	chr7	29136575	29136634	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	5	-14.8286
chr13	64253908	64253931	protein_coding	Zfp367	exon	ENSMUSG00000044934	ProperStrand	34	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-3.0056
chr10	4994357	4994405	protein_coding	Syne1	exon	ENSMUSG00000019769	ProperStrand	49	chr11	101466308	101466351	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	1	-9.2786
chr17	37140877	37140925	protein_coding	Zfp57	utr5	ENSMUSG00000036036	ProperStrand	39	chr11	69481335	69481380	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-6.7372
chr13	59626576	59629797	protein_coding	Agtpbp1	exon	ENSMUSG00000021557	ProperStrand	35	chrX	84483698	84483732	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-9.3328
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr4	44797760	44797781	protein_coding	Zcchc7	intron	ENSMUSG00000035649	NonProperStrand	4	1	-12.6874
chr2	25920077	25920093	protein_coding	Nacc2	exon	ENSMUSG00000026932	NonProperStrand	15	chr6	115758088	115758119	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-8.2493
chr11	21040584	21040600	protein_coding	Peli1	exon	ENSMUSG00000020134	ProperStrand	69	chr11	62418013	62418044	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-5.2845
chr11	97643009	97643092	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	chr2	26766808	26766830	snoRNA	ENSMUSG00000065258_SNORD24	.	ENSMUSG00000065258	ProperStrand	130	1	-1.2682
chrX	99380377	99380467	protein_coding	Rps4x	exon	ENSMUSG00000031320	ProperStrand	139	chr11	6428087	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.7712
chr8	119780674	119780727	Low_complexity	C-rich	Low_complexity	chr8C-rich119780676	ProperStrand	1	chr2	25105896	25107254	protein_coding	Ndor1	exon	ENSMUSG00000006471	NonProperStrand	84	1	-inf
chr9	123065930	123065946	protein_coding	Clec3b	exon	ENSMUSG00000025784	ProperStrand	58	chr5	108334194	108334263	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-4.8854
chr1	152270735	152270753	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	chr2	26494710	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	3	-1.0216
chr11	32645718	32645765	protein_coding	Fbxw11	utr3	ENSMUSG00000020271	ProperStrand	36	chr5	121655051	121655156	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.7185
chr7	51505822	51505846	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	chr6	120700901	120700995	protein_coding	Cecr2	exon	ENSMUSG00000071226	ProperStrand	39	1	-9.4813
chr12	107023197	107023220	protein_coding	Papola	intron	ENSMUSG00000021111	ProperStrand	67	chr1	134401582	134401648	protein_coding	Rbbp5	utr3	ENSMUSG00000026439	ProperStrand	22	1	-15.1148
chr1	120574771	120574824	protein_coding	Tfcp2l1	utr3	ENSMUSG00000026380	ProperStrand	158	chr19	8963087	8963181	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	4	-4.2020
chr14	76510851	76525966	protein_coding	Nufip1	exon	ENSMUSG00000022009	ProperStrand	12	chr7	118219574	118219639	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	4	-inf
chr9	44142809	44142899	protein_coding	H2afx	utr5	ENSMUSG00000049932	ProperStrand	137	chr1	89673628	89673708	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-1.8550
chr4	17013222	17013239	LINE	Lx7	L1	chr4Lx717013225	ProperStrand	1	chr7	29136552	29136610	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-inf
chr9	75067119	75067172	protein_coding	Myo5a	utr3	ENSMUSG00000034593	ProperStrand	89	chr13	23714198	23714294	protein_coding	Hist1h1e	exon	ENSMUSG00000051627	ProperStrand	41	1	-13.2943
chr2	26768394	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	chr2	26768049	26768085	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	1	-1.2721
chr3	95232613	95232688	lincRNA	Gm4349	exon	ENSMUSG00000091761	ProperStrand	1	chr11	97642986	97643076	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-inf
chr15	36720566	36720590	protein_coding	Ywhaz	exon	ENSMUSG00000022285	ProperStrand	73	chr4	131908689	131908808	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.9692
chr2	90235316	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	77952107	77952123	protein_coding	Fbxo9	exon	ENSMUSG00000001366	ProperStrand	6	1	-9.1372
chr5	142877932	142877955	protein_coding	Foxk1	exon	ENSMUSG00000056493	ProperStrand	19	chr1	162965531	162965593	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-9.0252
chr1	72272861	72272918	snRNA	ENSMUSG00000075752_U2	.	ENSMUSG00000075752	ProperStrand	535	chr12	88778631	88778731	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-2.3973
chr2	90235312	90235330	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	71331290	71331316	protein_coding	Polr2m	exon	ENSMUSG00000032199	ProperStrand	83	1	-3.8496
chr1	145626057	145626113	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	chr1	89681275	89681366	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	14	-inf
chr15	85217552	85217584	protein_coding	Atxn10	exon	ENSMUSG00000016541	ProperStrand	96	chr4	131866159	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-2.8151
chr1	162966810	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	chr14	52829476	52829566	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	2	-2.9900
chr10	80641695	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	chr15	98350174	98350274	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	9	-8.3094
chr14	121066098	121066116	LINE	Lx8	L1	chr14Lx8121065427	NonProperStrand	1	chr11	97639458	97639585	protein_coding	Rpl23	exon	ENSMUSG00000071415	ProperStrand	920	1	-inf
chr9	78550961	78550977	protein_coding	Cd109	exon	ENSMUSG00000046186	NonProperStrand	36	chr3	95980363	95980410	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	2	-12.6057
chr4	133799975	133800020	protein_coding	Zfp593	utr3	ENSMUSG00000028840	ProperStrand	6	chr16	23111373	23111463	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	5	-19.0950
chr5	31782731	31782748	protein_coding	Zfp512	utr3	ENSMUSG00000062761	ProperStrand	44	chr10	107800759	107800853	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	1	-8.6925
chr10	70719463	70719505	protein_coding-noncoding	Ube2d1	utr3	ENSMUSG00000019927	ProperStrand	2	chr16	23110830	23110875	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-inf
chr5	106613978	106613994	LTR	RMER19C	ERVK	chr5RMER19C106613786	NonProperStrand	12	chr11	97643062	97643079	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-5.5085
chr4	81748401	81748420	lincRNA	Gm5860	exon	ENSMUSG00000085022	ProperStrand	9	chr4	131908236	131908298	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-11.8511
chr2	90235298	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	113005356	113005373	lincRNA	2610035D17Rik	intron	ENSMUSG00000087259	NonProperStrand	38	1	-5.3470
chr4	122968584	122968689	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	chr8	34802368	34802416	snoRNA	ENSMUSG00000088856_SNORA48	.	ENSMUSG00000088856	ProperStrand	236	1	-3.6508
chr7	148818065	148818150	protein_coding	Ap2a2	utr3	ENSMUSG00000002957	ProperStrand	76	chr1	185857228	185857244	protein_coding	1700056E22Rik	exon	ENSMUSG00000044854	ProperStrand	173	1	-10.7134
chr11	5772243	5774147	protein_coding	Pold2	exon	ENSMUSG00000020471	ProperStrand	58	chr4	131866157	131866259	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-6.3113
chr11	107074496	107074527	protein_coding	Pitpnc1	intron	ENSMUSG00000040430	ProperStrand	46	chr19	8798484	8798523	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-5.7313
chr9	72596119	72596151	protein_coding	Nedd4	utr3	ENSMUSG00000032216	ProperStrand	308	chr19	41658859	41658903	protein_coding	Gm340	exon	ENSMUSG00000090673	ProperStrand	19	1	-12.3675
chr5	128306989	128307007	protein_coding	Tmem132d	intron	ENSMUSG00000034310	NonProperStrand	22	chr4	131908689	131908789	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-7.4295
chr7	117189861	117189941	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr11	6428035	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	11	-0.7799
chr10	68174943	68174959	DNA	MER2	MER2_type	chr10MER268174907	NonProperStrand	2	chr18	35102880	35105623	protein_coding	Hspa9	exon	ENSMUSG00000024359	ProperStrand	166	2	-inf
chr8	108776936	108776953	lincRNA	Gm17245	intron	ENSMUSG00000067626	ProperStrand	27	chr11	48614047	48614072	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	1	-11.4115
chr8	82234804	82234846	protein_coding	Abce1	intron	ENSMUSG00000058355	ProperStrand	66	chr17	24857815	24857849	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.1388
chr17	45768755	45768772	protein_coding	Capn11	exon	ENSMUSG00000058626	NonProperStrand	5	chr11	6428076	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-8.1751
chr14	33005138	33005210	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	NonProperStrand	13	chr16	23110968	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	NonProperStrand	93	1	-15.5488
chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	chr7	150717298	150717367	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-4.7862
chr8	59991902	59991992	protein_coding	Hmgb2	exon	ENSMUSG00000054717	ProperStrand	184	chr9	15119288	15119368	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-3.0116
chr15	76015851	76016040	protein_coding	Plec	exon	ENSMUSG00000022565	ProperStrand	186	chr11	72214959	72214991	protein_coding	Smtnl2	exon	ENSMUSG00000045667	ProperStrand	30	2	-inf
chr4	116875203	116875250	snRNA	ENSMUSG00000070228_U5	.	ENSMUSG00000070228	ProperStrand	131	chr8	32260335	32260411	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-3.1734
chr11	95835336	95835387	protein_coding	Igf2bp1	exon	ENSMUSG00000013415	ProperStrand	140	chr5	135857995	135858011	protein_coding	Pom121	exon	ENSMUSG00000053293	NonProperStrand	94	1	-10.7100
chr4	46482845	46484335	protein_coding	Anp32b	exon	ENSMUSG00000028333	ProperStrand	229	chr14	98302394	98302412	protein_coding	Dach1	utr3	ENSMUSG00000055639	NonProperStrand	7	1	-15.0704
chr2	90235286	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	93542736	93542754	protein_coding	Ext2	intron	ENSMUSG00000027198	NonProperStrand	21	1	-6.5250
chr15	99538407	99539746	protein_coding	Smarcd1	exon	ENSMUSG00000023018	ProperStrand	43	chr10	23505152	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-3.1809
chr16	64770795	64770813	protein_coding	4930453N24Rik	utr5	ENSMUSG00000059920	ProperStrand	39	chr15	79908932	79909020	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-6.3212
chr3	134151041	134151057	lincRNA	Gm16742	intron	ENSMUSG00000084777	NonProperStrand	42	chr16	93762365	93762402	protein_coding	Dopey2	exon	ENSMUSG00000022946	ProperStrand	22	1	-16.0887
chr15	72638705	72638722	protein_coding	Trappc9	intron	ENSMUSG00000047921	NonProperStrand	53	chr11	68886949	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-4.3796
chr4	118927302	118927319	antisense	Gm12927	.	ENSMUSG00000085203	ProperStrand	4	chr18	35716833	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-7.5042
chr17	50244364	50244381	protein_coding	Rftn1	intron	ENSMUSG00000039316	ProperStrand	11	chr4	131865379	131865479	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-7.3625
chr10	87892265	87892282	protein_coding	Gnptab	exon	ENSMUSG00000035311	ProperStrand	65	chr11	116938608	116938708	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-6.0015
chrX	91783040	91783385	protein_coding	Maged1	exon	ENSMUSG00000025151	ProperStrand	43	chr19	8800462	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-4.1536
chr3	89904331	89904446	protein_coding	Tpm3	utr3	ENSMUSG00000027940	ProperStrand	55	chr17	25969044	25969068	protein_coding	Stub1	exon	ENSMUSG00000039615	ProperStrand	24	6	-18.9597
chr16	38089675	38089733	protein_coding	Gsk3b	utr5	ENSMUSG00000022812	ProperStrand	80	chr4	116364387	116364455	protein_coding	Prdx1	exon	ENSMUSG00000028691	ProperStrand	41	3	-inf
chr2	173935895	173935912	protein_coding	Npepl1	utr5	ENSMUSG00000039263	ProperStrand	5	chr4	131908752	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.7672
chr9	110020249	110020271	protein_coding	Gm10615	utr5	ENSMUSG00000074056	ProperStrand	1	chr18	35714188	35714291	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-inf
chr2	115988326	115988406	LINE	L1M2	L1	chr2L1M2115988023	NonProperStrand	1	chr2	115988491	115988581	SINE	B2_Mm2	B2	chr2B2_Mm2115988489	NonProperStrand	1	1	-inf
chr12	83094200	83094219	protein_coding	Pcnx	exon	ENSMUSG00000021140	ProperStrand	32	chr11	57855096	57855145	protein_coding	Larp1	exon	ENSMUSG00000037331	ProperStrand	201	1	-12.1583
chr4	41148555	41149311	protein_coding	Ubap2	exon	ENSMUSG00000028433	ProperStrand	292	chr4	116826698	116826745	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-3.7275
chr19	10059325	10059384	protein_coding	Fth1	exon	ENSMUSG00000024661	ProperStrand	75	chr7	52381972	52382025	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-6.2706
chr3	129725853	129725870	protein_coding	Sec24b	intron	ENSMUSG00000001052	ProperStrand	26	chr18	35714144	35714260	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-5.0340
chr1	137346610	137347216	protein_coding	Nav1	exon	ENSMUSG00000009418	ProperStrand	38	chr18	73693112	73693136	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	3	-14.7306
chr15	84145248	84145265	protein_coding	Parvb	utr3	ENSMUSG00000022438	ProperStrand	127	chr17	30772308	30772324	protein_coding	Dnahc8	utr5	ENSMUSG00000033826	ProperStrand	246	1	-8.9814
chr17	35389971	35389987	protein_coding	Ddx39b	exon	ENSMUSG00000019432	ProperStrand	119	chr13	51806900	51806970	protein_coding	Sema4d	exon	ENSMUSG00000021451	ProperStrand	42	1	-12.6577
chr19	45409733	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr11	68886946	68887038	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	2	-1.2168
chr14	60157974	60158029	protein_coding	Cab39l	exon	ENSMUSG00000021981	ProperStrand	11	chr8	73419657	73419755	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-10.5244
chr15	75731134	75731161	protein_coding	Eef1d	exon	ENSMUSG00000055762	ProperStrand	99	chr18	35102297	35102364	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	2	-9.1534
chr10	79520399	79520416	protein_coding	Sbno2	exon	ENSMUSG00000035673	NonProperStrand	11	chr8	86671629	86671692	protein_coding	Cc2d1a	utr5	ENSMUSG00000036686	ProperStrand	18	1	-18.5094
chr2	119071615	119072129	protein_coding	Spint1	exon	ENSMUSG00000027315	ProperStrand	17	chr7	29136547	29136653	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	6	-inf
chr11	116535470	116535534	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr10	5990680	5990755	protein_coding	Akap12	utr3	ENSMUSG00000038587	ProperStrand	1008	1	-1.0062
chr6	51422426	51422477	protein_coding	Cbx3	intron	ENSMUSG00000029836	ProperStrand	19	chr9	120038623	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-8.6373
chrX	136242613	136242631	protein_coding	Tbc1d8b	intron	ENSMUSG00000042473	NonProperStrand	27	chr16	23111449	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.5132
chr4	118324917	118324933	LINE	L1M2	L1	chr4L1M2118324921	ProperStrand	8	chr17	35299528	35299642	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-8.8452
chr4	148632070	148636292	protein_coding	Kif1b	exon	ENSMUSG00000063077	ProperStrand	60	chr1	89673606	89673686	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	2	-5.5965
chr5	151333667	151333709	protein_coding	Brca2	exon	ENSMUSG00000041147	ProperStrand	75	chr9	120039549	120039626	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.9174
chr19	7095577	7096145	protein_coding	Stip1	utr3	ENSMUSG00000024966	ProperStrand	100	chr17	13112487	13112567	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	2	-6.1316
chr2	89368462	89368478	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	chr17	35088971	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-3.0783
chr9	78328476	78329474	protein_coding	Eef1a1	utr5	ENSMUSG00000037742	ProperStrand	1990	chr7	52381758	52381805	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-1.2207
chr11	120460562	120460662	protein_coding	Anapc11	utr5	ENSMUSG00000025135	ProperStrand	6	chr16	23110456	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-11.4714
chr13	63613214	63613314	protein_coding	Ptch1	exon	ENSMUSG00000021466	ProperStrand	50	chr5	73902888	73902913	protein_coding	Dcun1d4	intron	ENSMUSG00000051674	ProperStrand	5	1	-18.8567
chr2	3144001	3144100	protein_coding	Fam171a1	utr3	ENSMUSG00000050530	ProperStrand	12	chr15	79908931	79908955	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	2	-13.9483
chr16	21221831	21221940	protein_coding	Ephb3	exon	ENSMUSG00000005958	NonProperStrand	14	chr4	126703409	126703426	protein_coding	Sfpq	exon	ENSMUSG00000028820	ProperStrand	340	1	-12.8013
chr12	85015909	85015972	protein_coding	Rbm25	intron	ENSMUSG00000010608	ProperStrand	42	chr5	73699983	73700083	protein_coding	Ociad1	utr3	ENSMUSG00000029152	ProperStrand	51	3	-inf
chr10	77873005	77873063	protein_coding	Rrp1	intron	ENSMUSG00000061032	ProperStrand	177	chr17	24857802	24857849	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-1.5553
mmu-miR-1949	0	23	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr17	88385344	88385412	protein_coding	Msh6	exon	ENSMUSG00000005370	ProperStrand	150	1	-6.3306
chr11	6519917	6519944	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	chr8	32260335	32260421	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	4	-2.6754
chr15	102150203	102150285	protein_coding	Espl1	exon	ENSMUSG00000058290	ProperStrand	172	chr16	23111448	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	5	-2.4763
chr17	75790277	75790293	protein_coding	Ltbp1	utr3	ENSMUSG00000001870	NonProperStrand	66	chr9	120039622	120039676	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.1459
chr6	45965480	46120177	protein_coding	Cntnap2	exon	ENSMUSG00000039419	NonProperStrand	283	chr3	88715213	88715230	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-4.2138
chr7	56556420	56556436	protein_coding	Nav2	intron	ENSMUSG00000052512	ProperStrand	106	chr6	71832629	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-4.5104
chr2	26494691	26494791	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr12	21423368	21423404	protein_coding	Ywhaq	exon	ENSMUSG00000076432	ProperStrand	70	1	-5.8911
chr4	122968595	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	chr11	77995191	77995241	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	2	-0.9351
chr8	87715741	87715831	LINE	L1_Mur3	L1	chr8L1_Mur387715658	NonProperStrand	1	chr8	87716063	87716143	LTR	RLTR16	ERVK	chr8RLTR1687716047	NonProperStrand	1	1	-inf
chr19	29095393	29095432	protein_coding	Ak3	utr3	ENSMUSG00000024782	ProperStrand	7	chr15	71624754	71624797	snoRNA	ENSMUSG00000088895_SNORA81	.	ENSMUSG00000088895	ProperStrand	348	1	-14.2121
chr17	35089275	35089367	processed_transcript	1110038B12Rik	.	ENSMUSG00000092203	ProperStrand	126	chr5	103854542	103854558	protein_coding	Ptpn13	utr5	ENSMUSG00000034573	NonProperStrand	74	1	-11.4019
chr5	138608397	138608487	protein_coding	Mcm7	exon	ENSMUSG00000029730	ProperStrand	258	chr2	26493405	26493485	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-1.3058
chr5	120889875	120889892	protein_coding	Lhx5	intron	ENSMUSG00000029595	NonProperStrand	106	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	3	-15.0197
chr1	93396222	93396239	protein_coding	Traf3ip1	exon	ENSMUSG00000034292	ProperStrand	4	chr1	162965565	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-8.7752
chr7	73126786	73126823	protein_coding	Pcsk6	intron	ENSMUSG00000030513	ProperStrand	32	chr9	99483993	99484009	protein_coding	Dbr1	exon	ENSMUSG00000032469	ProperStrand	162	1	-12.5905
chr18	60995496	60997576	protein_coding	Tcof1	exon	ENSMUSG00000024613	ProperStrand	68	chr17	13112473	13112553	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-4.3408
chr16	17452420	17452437	protein_coding	Crkl	utr5	ENSMUSG00000006134	ProperStrand	43	chr16	32623143	32623220	protein_coding	Tfrc	exon	ENSMUSG00000022797	ProperStrand	71	1	-13.6534
chr3	101392952	101408421	protein_coding	Atp1a1	utr5	ENSMUSG00000033161	ProperStrand	316	chr16	23111691	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	11	-8.0213
chr5	135107795	135107885	protein_coding	Eif4h	intron	ENSMUSG00000040731	ProperStrand	46	chr18	35714174	35714254	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-6.6373
chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	chr8	113447110	113447160	snoRNA	ENSMUSG00000065100_SNORA57	.	ENSMUSG00000065100	ProperStrand	81	1	-7.1299
chr7	133631252	133631802	protein_coding	Tufm	exon	ENSMUSG00000073838	ProperStrand	28	chr7	116664794	116664909	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	9	-19.7942
chr10	96752596	96752617	LTR	ORR1E	MaLR	chr10ORR1E96752547	ProperStrand	1	chr5	139705320	139705343	protein_coding	Sun1	intron	ENSMUSG00000036817	ProperStrand	108	1	-inf
chr6	31345760	31345776	lincRNA	Gm13845	exon	ENSMUSG00000086212	ProperStrand	4	chr4	43997088	43997105	protein_coding	Ccin	exon	ENSMUSG00000070999	NonProperStrand	1	1	-inf
chr11	102294850	102295283	protein_coding	Grn	exon	ENSMUSG00000034708	ProperStrand	43	chr4	131908776	131908866	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.7076
chr10	96067564	96067581	LTR	RMER19B	ERVK	chr10RMER19B96067159	ProperStrand	12	chr7	29136525	29136575	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.3856
chr10	127751447	127751463	protein_coding	Pan2	intron	ENSMUSG00000005682	ProperStrand	53	chr11	69483136	69483227	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.6634
chr2	172270204	172270220	protein_coding	2410001C21Rik	exon	ENSMUSG00000027502	NonProperStrand	54	chr9	95953049	95953102	protein_coding	Xrn1	exon	ENSMUSG00000032410	ProperStrand	12	1	-16.8471
chr5	121655016	121655155	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	chr19	8798739	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	17	-0.7745
chr15	74537550	74537650	protein_coding	Jrk	exon	ENSMUSG00000046380	ProperStrand	7	chr2	32818887	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-9.8490
chr14	33340050	33354413	protein_coding	Ercc6	exon	ENSMUSG00000054051	ProperStrand	19	chr1	91358413	91358430	protein_coding	Agap1	intron	ENSMUSG00000055013	ProperStrand	229	1	-12.9632
chr14	34206134	34206153	protein_coding	Mapk8	exon	ENSMUSG00000021936	NonProperStrand	8	chr2	119742851	119742941	protein_coding	Mga	exon	ENSMUSG00000033943	ProperStrand	180	2	-19.9843
chr5	115939518	115939612	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr10	23505148	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	36	-11.9425
chr2	126934246	126946972	protein_coding	Ncaph	exon	ENSMUSG00000034906	ProperStrand	43	chr5	130300528	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	7	-inf
chr15	97897281	97906244	protein_coding	Senp1	exon	ENSMUSG00000033075	ProperStrand	24	chr1	162968448	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	2	-12.6751
chr4	134771543	134781976	protein_coding	Clic4	exon	ENSMUSG00000037242	ProperStrand	84	chr10	23505152	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-1.6576
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr17	79242347	79242369	protein_coding	Ccdc75	intron	ENSMUSG00000050668	ProperStrand	55	1	-8.7801
chr5	123244474	123249384	protein_coding	Anapc5	exon	ENSMUSG00000029472	ProperStrand	92	chr19	8800356	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	10	-inf
chr19	5800124	5800214	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr11	98878391	98878471	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	2	-2.2519
chr2	157119950	157120991	protein_coding	Rpn2	exon	ENSMUSG00000027642	ProperStrand	363	chr7	87472471	87472493	protein_coding	Unc45a	exon	ENSMUSG00000030533	ProperStrand	2	1	-17.2251
chrX	158274965	158274981	protein_coding	Nhs	exon	ENSMUSG00000059493	NonProperStrand	50	chr1	162965980	162965998	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-3.9434
chr17	27559700	27559717	protein_coding	Grm4	utr3	ENSMUSG00000063239	ProperStrand	147	chr10	110918593	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	3	-5.2827
chr10	75973861	75973961	protein_coding	Mcm3ap	exon	ENSMUSG00000001150	ProperStrand	95	chr11	55296279	55296334	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-5.2803
chr8	73318509	73318609	protein_coding	Mast3	intron	ENSMUSG00000031833	ProperStrand	23	chr14	52829460	52829485	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-10.1376
chr4	131825997	131826035	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	NonProperStrand	4	chr18	35714144	35714258	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	NonProperStrand	47	1	-20.2887
chr4	134211461	134211482	protein_coding	Man1c1	intron	ENSMUSG00000037306	ProperStrand	22	chr16	23110828	23110915	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.8207
chr12	111887501	111887580	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr5	54047054	54047072	protein_coding	Rbpj	utr3	ENSMUSG00000039191	ProperStrand	96	2	-12.1834
chr6	71903037	71904735	protein_coding	Polr1a	exon	ENSMUSG00000049553	ProperStrand	109	chrX	34622938	34623018	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-2.1394
chr5	8420130	8420196	protein_coding-noncoding	Dbf4	utr3	ENSMUSG00000002297	ProperStrand	1	chr19	8800386	8800476	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-inf
chr17	12906936	12907742	protein_coding	Igf2r	exon	ENSMUSG00000023830	ProperStrand	151	chr7	148634803	148634836	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	3	-6.2174
chr11	77995554	77995634	protein_coding	Rpl23a	intron	ENSMUSG00000058546	ProperStrand	121	chr4	131865413	131865503	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-2.7269
chr2	90235313	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	85016349	85016365	protein_coding	Sh3gl2	intron	ENSMUSG00000028488	NonProperStrand	313	3	-4.5445
chr15	84145769	84145786	protein_coding	Parvb	utr3	ENSMUSG00000022438	ProperStrand	127	chr6	71832629	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-4.1677
chr12	82051102	82051176	protein_coding	Srsf5	utr3	ENSMUSG00000021134	ProperStrand	68	chr11	97642992	97643082	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.2606
chr9	75236426	75236516	protein_coding	Mapk6	exon	ENSMUSG00000042688	ProperStrand	25	chr8	73419697	73419777	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.7786
chr9	78327762	78327843	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr2	132834370	132834394	snRNA	ENSMUSG00000065050_U1	.	ENSMUSG00000065050	ProperStrand	1	1	-inf
chr10	3516396	3516444	protein_coding	Oprm1	exon	ENSMUSG00000000766	ProperStrand	18	chr9	15119301	15119411	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	7	-23.0176
chrX	54644624	54644697	snoRNA	ENSMUSG00000065110_Snord61	.	ENSMUSG00000065110	ProperStrand	40	chr9	15118245	15118321	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-4.2260
chr5	129308507	129308524	protein_coding	Rimbp2	intron	ENSMUSG00000029420	NonProperStrand	19	chr19	8799851	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-7.2272
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	25563070	25563086	antisense	A230005M16Rik	.	ENSMUSG00000087612	ProperStrand	103	2	-5.8747
chr4	118913727	118913744	protein_coding	Lepre1	exon	ENSMUSG00000028641	ProperStrand	21	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.2792
chr17	47759750	47759840	protein_coding-noncoding	Med20	utr5	ENSMUSG00000092558	ProperStrand	2	chr19	8800391	8800471	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-10.8391
chr13	96247406	96248477	protein_coding	S100z	exon	ENSMUSG00000021679	NonProperStrand	43	chr15	94755116	94755132	protein_coding	Tmem117	intron	ENSMUSG00000063296	ProperStrand	10	1	-17.7756
chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	chr1	88247816	88247876	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-0.7696
chr6	136765605	136765629	protein_coding	Wbp11	exon	ENSMUSG00000030216	ProperStrand	87	chr4	138376759	138376825	protein_coding	Pla2g5	intron	ENSMUSG00000041193	ProperStrand	5	3	-19.0380
chr7	37526964	37526981	protein_coding	Tshz3	intron	ENSMUSG00000021217	ProperStrand	16	chr4	117317844	117317926	protein_coding	Eri3	intron	ENSMUSG00000033423	ProperStrand	246	1	-13.1708
chr9	43966747	43966785	protein_coding	Cbl	exon	ENSMUSG00000034342	ProperStrand	7	chr16	23110550	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-6.6152
chr16	82506304	82506322	LINE	L1_Mur2	L1	chr16L1_Mur282506077	NonProperStrand	5	chr7	29136525	29136580	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-7.2327
chr17	12934275	12972157	antisense	Airn	.	ENSMUSG00000078247	ProperStrand	5	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-12.8963
chr8	119849431	119849505	protein_coding	4933407C03Rik	intron	ENSMUSG00000034390	ProperStrand	48	chr4	132394348	132394438	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	1	-9.5863
chr11	96773224	96773531	protein_coding	Cdk5rap3	exon	ENSMUSG00000018669	ProperStrand	16	chr10	23505150	23505209	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.4264
chr10	45332666	45332733	protein_coding	Hace1	intron	ENSMUSG00000038822	ProperStrand	8	chr16	23110852	23110942	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.2180
chr7	148155590	148155617	protein_coding	Ifitm1	utr3	ENSMUSG00000025491	ProperStrand	18	chr16	23111451	23111505	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-5.6208
chr17	35386531	35386602	protein_coding-noncoding	Ddx39b	utr5	ENSMUSG00000019432	ProperStrand	7	chr15	98350191	98350281	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-9.1140
chr5	100855902	100855951	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr9	40612871	40612921	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	3	-7.7269
chr9	42072224	42072242	protein_coding	Sc5d	utr5	ENSMUSG00000032018	ProperStrand	19	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-10.0630
chr13	72100991	72101008	protein_coding	Irx1	utr5	ENSMUSG00000060969	NonProperStrand	15	chr9	15119967	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-10.0588
chr15	81783180	81783270	protein_coding-noncoding	Pmm1	utr3	ENSMUSG00000022474	ProperStrand	2	chr15	81783046	81783136	protein_coding	Pmm1	intron	ENSMUSG00000022474	ProperStrand	24	1	-inf
chr17	66468411	66468429	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	chr5	120986213	120987649	protein_coding	Tpcn1	exon	ENSMUSG00000032741	ProperStrand	15	1	-12.6761
chr13	3860617	3860634	SINE	RSINE1	B4	chr13RSINE13860554	NonProperStrand	12	chr17	39985618	39985681	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-9.1812
chr1	141319671	141319687	protein_coding	Zbtb41	utr5	ENSMUSG00000033964	NonProperStrand	145	chr5	108334207	108334241	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-3.1692
chr4	107566006	107567516	protein_coding	0610037L13Rik	exon	ENSMUSG00000028608	ProperStrand	3	chrX	81770208	81770228	protein_coding	Dmd	intron	ENSMUSG00000045103	NonProperStrand	23	1	-20.2630
chr2	179918359	179926402	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr9	120038468	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	4	-2.7537
chr11	94272403	94272420	protein_coding	Cacna1g	exon	ENSMUSG00000020866	ProperStrand	35	chr4	117930109	117930252	protein_coding	Ptprf	exon	ENSMUSG00000033295	ProperStrand	337	3	-inf
chr13	8766291	8766308	protein_coding	Adarb2	utr3	ENSMUSG00000052551	ProperStrand	292	chr17	35089180	35089229	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-2.5454
chr11	97028903	97037161	protein_coding	Kpnb1	exon	ENSMUSG00000001440	ProperStrand	197	chr18	35714218	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	21	-19.8570
chr15	98643909	98644080	protein_coding	Prkag1	exon	ENSMUSG00000067713	ProperStrand	2	chr11	97642980	97643070	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-9.6446
chr12	4134588	4134688	protein_coding	Adcy3	exon	ENSMUSG00000020654	ProperStrand	33	chr11	68886978	68887040	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-5.2969
chr9	44127702	44127757	protein_coding	C2cd2l	exon	ENSMUSG00000032120	ProperStrand	8	chr16	23111377	23111467	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.8232
chr17	66173224	66173314	protein_coding	Ppp4r1	intron	ENSMUSG00000061950	ProperStrand	46	chr11	68886928	68887008	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-4.6512
chr2	103679305	103679323	miRNA	AL928544.2	.	ENSMUSG00000076234	NonProperStrand	1	chr12	34122837	34122854	protein_coding	Twistnb	exon	ENSMUSG00000020561	ProperStrand	6	1	-inf
chr18	80932872	80935465	protein_coding	Atp9b	exon	ENSMUSG00000024566	ProperStrand	30	chr3	123210899	123210979	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.2714
chr5	122022827	122023442	protein_coding	Aldh2	exon	ENSMUSG00000029455	ProperStrand	108	chr4	131908810	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-3.0739
chr18	37802349	37802449	protein_coding	Taf7	exon	ENSMUSG00000051316	ProperStrand	24	chr1	162967514	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-5.2247
chr6	119521622	119521640	protein_coding	Erc1	utr3	ENSMUSG00000030172	ProperStrand	69	chr18	35716762	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.9428
chr9	63042015	63042031	protein_coding	Map2k5	exon	ENSMUSG00000058444	ProperStrand	193	chr2	32818886	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-3.2610
chr13	9833548	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr5	92883081	92883126	protein_coding	Scarb2	exon	ENSMUSG00000029426	ProperStrand	30	1	-6.3165
chr3	20164330	20164347	protein_coding	Cpb1	exon	ENSMUSG00000011463	NonProperStrand	6	chr2	26493366	26493485	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	4	-inf
chr2	26493464	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr8	124639742	124639759	protein_coding	Gm20388	intron	ENSMUSG00000092329	ProperStrand	295	1	-3.1649
chr12	87861411	87861482	protein_coding	Esrrb	utr3	ENSMUSG00000021255	ProperStrand	254	chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-3.1105
chr18	24665508	24665619	protein_coding	Rprd1a	exon	ENSMUSG00000040446	ProperStrand	21	chr11	32322903	32322984	protein_coding	Sh3pxd2b	exon	ENSMUSG00000040711	ProperStrand	11	1	-18.6542
chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	chr19	8798484	8798513	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-2.2511
chr17	35278406	35278461	protein_coding	Bag6	exon	ENSMUSG00000024392	ProperStrand	181	chr12	81492688	81492737	snoRNA	ENSMUSG00000088158_Scarna3b	.	ENSMUSG00000088158	ProperStrand	147	3	-inf
chr19	30173184	30173275	protein_coding	Gldc	utr3	ENSMUSG00000024827	ProperStrand	175	chr19	8798523	8798553	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-5.4781
chr6	125112404	125114349	protein_coding	Gapdh	exon	ENSMUSG00000057666	ProperStrand	356	chr7	116663633	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	6	-3.7364
chr5	60184034	60184124	LINE	Lx8	L1	chr5Lx860183996	ProperStrand	1	chr5	60183901	60183981	LTR	MTE2b	MaLR	chr5MTE2b60183669	ProperStrand	1	1	-inf
chr9	110531729	110531819	protein_coding-noncoding	Nbeal2	utr3	ENSMUSG00000056724	NonProperStrand	1	chr9	110531638	110531718	protein_coding	Nbeal2	exon	ENSMUSG00000056724	NonProperStrand	3	1	-inf
chr9	78326929	78327112	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr11	121786609	121786643	protein_coding	Gm12588	utr5	ENSMUSG00000062632	ProperStrand	9	3	-19.9627
chr16	38417222	38417241	protein_coding	Pla1a	exon	ENSMUSG00000002847	ProperStrand	32	chr17	13112469	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	4	-17.6664
chr7	26472435	26472451	protein_coding	Tgfb1	utr5	ENSMUSG00000002603	NonProperStrand	154	chr11	97642949	97643079	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.0443
chr15	81301403	81304303	protein_coding	Rbx1	exon	ENSMUSG00000022400	ProperStrand	78	chr9	120039592	120039682	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.8481
chr17	35808747	35808837	protein_coding-noncoding	Gtf2h4	utr3	ENSMUSG00000001524	ProperStrand	1	chr17	35808499	35808589	protein_coding	Gtf2h4	intron	ENSMUSG00000001524	ProperStrand	9	1	-inf
chr4	136876460	136876485	protein_coding	Cdc42	utr3	ENSMUSG00000006699	ProperStrand	38	chr9	15119976	15120034	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	3	-18.5141
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr4	149019009	149019087	protein_coding	Clstn1	exon	ENSMUSG00000039953	ProperStrand	173	1	-6.6837
chr16	8710235	8712106	protein_coding	Usp7	exon	ENSMUSG00000022710	ProperStrand	118	chr8	129468789	129468879	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-3.1573
chr16	56007285	56007385	protein_coding	Rpl24	exon	ENSMUSG00000022601	ProperStrand	149	chr11	62418044	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-3.8169
chr7	13610047	13610110	protein_coding	Trim28	utr5	ENSMUSG00000005566	ProperStrand	296	chr3	123210894	123210985	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	8	-5.5409
chr4	140624180	140625972	protein_coding	Necap2	exon	ENSMUSG00000028923	ProperStrand	4	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.0048
chr2	151342837	151342927	LINE	L1_Mur2	L1	chr2L1_Mur2151342731	NonProperStrand	1	chr2	151343156	151343246	LINE	L1_Mur2	L1	chr2L1_Mur2151343075	NonProperStrand	1	1	-inf
chr11	83311424	83312602	protein_coding	Taf15	exon	ENSMUSG00000020680	ProperStrand	60	chr18	35716834	35716871	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.1696
chrX	148369117	148369170	protein_coding	Huwe1	utr3	ENSMUSG00000025261	ProperStrand	501	chr4	124796957	124796975	protein_coding	Zc3h12a	exon	ENSMUSG00000042677	ProperStrand	37	1	-10.0383
chr4	43505702	43505792	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr4	147242626	147242670	protein_coding	Miip	utr5	ENSMUSG00000029022	ProperStrand	3	1	-9.2362
chr1	182100558	182101783	protein_coding	Adck3	exon	ENSMUSG00000026489	ProperStrand	17	chr16	23110916	23110996	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.8783
chr11	69266814	69266830	protein_coding	Dnahc2	exon	ENSMUSG00000005237	ProperStrand	95	chr5	114700247	114700273	protein_coding	Acacb	utr3	ENSMUSG00000042010	ProperStrand	7	1	-16.8778
chrX	70237449	70237470	miRNA	Mir2137	.	ENSMUSG00000089357	ProperStrand	50	chr17	36000485	36000501	protein_coding	Nrm	exon	ENSMUSG00000059791	ProperStrand	253	1	-10.7955
chr10	110923727	110933104	protein_coding	Nap1l1	exon	ENSMUSG00000058799	ProperStrand	185	chr10	23505152	23505230	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	8	-5.0386
chr9	103950068	103950086	protein_coding	Uba5	intron	ENSMUSG00000032557	ProperStrand	111	chr9	106588023	106588051	protein_coding	Tex264	utr5	ENSMUSG00000040813	ProperStrand	18	1	-14.5161
chr16	10380233	10380249	protein_coding	Tekt5	intron	ENSMUSG00000039179	ProperStrand	4	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-14.4538
chrX	7469427	7469458	protein_coding	Slc35a2	exon	ENSMUSG00000031156	ProperStrand	14	chr5	115939468	115939558	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-10.8189
chr18	60934339	60936074	protein_coding	Rps14	utr5	ENSMUSG00000024608	ProperStrand	154	chr7	29136528	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-1.9179
chr15	88885411	88885511	protein_coding	Mov10l1	utr3	ENSMUSG00000015365	ProperStrand	22	chr16	23110961	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-4.4664
chr12	112778712	112778739	protein_coding	Eif5	exon	ENSMUSG00000021282	ProperStrand	125	chr3	38361854	38361976	protein_coding	Ankrd50	exon	ENSMUSG00000044864	ProperStrand	36	1	-12.8708
chr6	30162058	30162074	protein_coding	Ube2h	utr3	ENSMUSG00000039159	ProperStrand	96	chr7	51505224	51505308	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	1	-7.2148
chr2	75747664	75747706	protein_coding	Agps	exon	ENSMUSG00000042410	ProperStrand	22	chr15	79908960	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-7.4689
chr11	3579758	3579906	protein_coding	Morc2a	exon	ENSMUSG00000034543	ProperStrand	62	chr16	43886851	43886928	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	10	-20.0438
chr17	36026476	36027880	protein_coding	Dhx16	exon	ENSMUSG00000024422	ProperStrand	28	chr11	69481397	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-4.6331
chr9	120038571	120038672	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	chr8	113362430	113362485	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	3	-1.3060
chr16	23111806	23111837	protein_coding	Eif4a2	intron	ENSMUSG00000022884	ProperStrand	356	chr13	49779671	49779762	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-3.5791
chr8	98241983	98242160	protein_coding	Setd6	exon	ENSMUSG00000031671	ProperStrand	35	chr9	15119661	15119751	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	6	-19.0340
chr1	155094133	155094184	protein_coding	Lamc1	exon	ENSMUSG00000026478	ProperStrand	239	chr8	73419657	73419744	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-1.9171
chr6	57712505	57712521	protein_coding	Vopp1	exon	ENSMUSG00000037788	NonProperStrand	21	chr1	162965531	162965548	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.2774
chr5	74489275	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr5	145532293	145532393	protein_coding	Trrap	intron	ENSMUSG00000045482	ProperStrand	399	1	-2.1412
chr4	154759127	154759144	protein_coding	Gabrd	utr3	ENSMUSG00000029054	ProperStrand	2	chr2	29886669	29886717	protein_coding	Spna2	utr3	ENSMUSG00000057738	ProperStrand	222	1	-18.0544
chr13	55391602	55392577	protein_coding	Nsd1	exon	ENSMUSG00000021488	ProperStrand	186	chr7	52382753	52382831	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-4.5464
chr11	70796314	70796371	protein_coding	C1qbp	exon	ENSMUSG00000018446	ProperStrand	46	chr3	68889051	68889151	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-3.7464
chr8	47620657	47620747	protein_coding	Acsl1	utr3	ENSMUSG00000018796	ProperStrand	23	chr19	8798740	8798793	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-6.6913
chr3	102861236	102861273	protein_coding	Csde1	utr3	ENSMUSG00000068823	ProperStrand	122	chr16	23111729	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-0.9047
chr1	133830535	133830552	protein_coding	Nucks1	utr3	ENSMUSG00000026434	ProperStrand	59	chr7	117166781	117166858	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-4.8484
chr9	78046175	78047304	protein_coding	Gsta4	exon	ENSMUSG00000032348	ProperStrand	82	chr9	120037991	120038055	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-4.1108
chr9	65044377	65044450	snRNA	ENSMUSG00000075763_U5	.	ENSMUSG00000075763	ProperStrand	216	chr7	51505506	51505584	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	1	-6.2368
chr12	3249301	3249327	protein_coding	Rab10	utr3	ENSMUSG00000020671	ProperStrand	11	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-8.6121
chr17	34089211	34089234	protein_coding	Rps18	exon	ENSMUSG00000008668	ProperStrand	111	chr8	73115775	73115791	protein_coding	Ell	utr3	ENSMUSG00000070002	NonProperStrand	134	1	-10.4647
chr2	158182156	158182180	lincRNA	9430008C03Rik	intron	ENSMUSG00000085385	ProperStrand	1039	chr12	101226245	101226265	protein_coding	Kcnk13	intron	ENSMUSG00000045404	ProperStrand	2	1	-15.0805
chr6	3794656	3794673	SINE	B4A	B4	chr6B4A3794525	NonProperStrand	26	chr2	65376282	65376298	protein_coding	Scn3a	intron	ENSMUSG00000057182	ProperStrand	26	1	-16.6563
chr7	17425709	17425799	protein_coding	Strn4	utr3	ENSMUSG00000030374	ProperStrand	12	chr7	116664822	116664902	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-5.5966
chrX	132312132	132312232	protein_coding	Gprasp1	intron	ENSMUSG00000043384	ProperStrand	57	chr2	22444484	22444505	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-7.8790
chr19	53305773	53306655	protein_coding	Add3	exon	ENSMUSG00000025026	ProperStrand	27	chr1	153607803	153607883	protein_coding	Edem3	intron	ENSMUSG00000043019	ProperStrand	84	7	-inf
chr3	96523245	96523395	protein_coding	Polr3c	exon	ENSMUSG00000028099	NonProperStrand	75	chr5	130300473	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-3.8333
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr11	69037669	69037685	protein_coding	Gucy2e	exon	ENSMUSG00000020890	NonProperStrand	99	1	-6.7996
chr8	74982538	74982621	protein_coding	1700030K09Rik	exon	ENSMUSG00000052794	ProperStrand	6	chr12	92811911	92812001	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	1	-13.3266
chr9	123065930	123065946	protein_coding	Clec3b	exon	ENSMUSG00000025784	ProperStrand	58	chr17	39985565	39985627	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	2	-9.7589
chr19	57538881	57547193	protein_coding	Trub1	exon	ENSMUSG00000025086	ProperStrand	19	chr11	69481334	69481431	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	6	-21.0282
chr11	23156446	23156536	protein_coding	Xpo1	utr5	ENSMUSG00000020290	ProperStrand	123	chr16	23111741	23111821	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-0.8950
chr5	32893685	32893701	antisense	Gm15614	.	ENSMUSG00000085234	ProperStrand	1	chr7	135604817	135604870	protein_coding	Tial1	utr5	ENSMUSG00000030846	ProperStrand	25	1	-inf
chr17	92490336	92490355	LINE	Lx3B	L1	chr17Lx3B92489706	ProperStrand	1	chr2	31890248	31890264	protein_coding	Nup214	exon	ENSMUSG00000001855	NonProperStrand	8	1	-inf
chr9	92437245	92437320	protein_coding	Plod2	utr5	ENSMUSG00000032374	ProperStrand	52	chr11	62418045	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	3	-13.5045
chr18	41356156	41356185	miRNA	Mir5097	dead	ENSMUSG00000093361	ProperStrand	221	chr2	26494708	26494808	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.0477
chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	chr2	153035641	153035690	protein_coding	Tm9sf4	utr3	ENSMUSG00000068040	ProperStrand	27	1	-11.0582
chr9	110108599	110108626	protein_coding	Smarcc1	exon	ENSMUSG00000032481	ProperStrand	108	chr17	24857717	24857807	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-2.6168
chr1	182740381	182741948	protein_coding	H3f3a	exon	ENSMUSG00000060743	ProperStrand	46	chr4	131908236	131908354	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-3.3401
chr6	52364655	52364735	SINE	B3	B2	chr6B352364626	ProperStrand	1	chr6	52364351	52364441	SINE	B4	B4	chr6B452364353	ProperStrand	1	1	-inf
chr8	87827286	87827348	protein_coding	Orc6	exon	ENSMUSG00000031697	ProperStrand	23	chr9	54731898	54733697	protein_coding	Ireb2	exon	ENSMUSG00000032293	ProperStrand	45	2	-20.1873
chr9	15130913	15130985	snoRNA	ENSMUSG00000077394_snoU2_19	.	ENSMUSG00000077394	ProperStrand	96	chr7	116664791	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	12	-inf
chr10	24622224	24623479	protein_coding	Med23	exon	ENSMUSG00000019984	ProperStrand	7	chr16	23110986	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.4785
chr15	27832308	27832324	protein_coding	Trio	exon	ENSMUSG00000022263	ProperStrand	108	chr1	71656048	71656152	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	1	-6.6653
chr7	31009259	31009290	protein_coding	Tbcb	exon	ENSMUSG00000006095	ProperStrand	5	chr18	35716863	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-6.9999
chr13	22135238	22135273	protein_coding	Hist1h2bj	exon	ENSMUSG00000069300	ProperStrand	13	chr1	162965997	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-6.5934
chr17	46301251	46301687	protein_coding	Gtpbp2	exon	ENSMUSG00000023952	ProperStrand	21	chrX	34622937	34623017	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-5.1646
chr11	5180669	5180685	protein_coding	Znrf3	utr3	ENSMUSG00000041961	NonProperStrand	210	chr2	145077957	145209255	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-5.2560
chr2	181090515	181090645	protein_coding	Rtel1	exon	ENSMUSG00000038685	ProperStrand	22	chr17	24857800	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.1130
chr11	77994824	77994864	snoRNA	ENSMUSG00000064540_Snord42a	.	ENSMUSG00000064540	ProperStrand	142	chr4	122970471	122970528	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	5	-inf
chr5	104869294	104869340	protein_coding	Spp1	exon	ENSMUSG00000029304	ProperStrand	52	chr3	19528533	19528550	protein_coding	1700064H15Rik	exon	ENSMUSG00000082766	NonProperStrand	78	1	-13.0765
chr2	32819267	32819284	protein_coding	Rpl12	exon	ENSMUSG00000038900	ProperStrand	167	chr9	120037898	120037972	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-2.8128
chr19	26448936	26448953	LTR	MERVL_2A-int	ERVL	chr19MERVL_2A-int26447963	ProperStrand	1	chr5	98683318	98683389	protein_coding	Fgf5	utr5	ENSMUSG00000029337	ProperStrand	6	1	-inf
chr17	35089237	35089263	processed_transcript	1110038B12Rik	.	ENSMUSG00000092203	ProperStrand	126	chr17	35089181	35089236	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	2	-6.8069
chr12	3248738	3248808	protein_coding	Rab10	utr3	ENSMUSG00000020671	ProperStrand	11	chr16	23111692	23111782	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.0138
chr13	55103835	55103851	protein_coding	Unc5a	exon	ENSMUSG00000025876	NonProperStrand	96	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-8.4283
chrX	132673816	132673833	protein_coding	Bex4	intron	ENSMUSG00000047844	NonProperStrand	70	chr7	116664794	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-6.1452
chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	chr5	115940305	115940406	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	6	-19.1490
chr1	55058297	55058375	protein_coding	Sf3b1	exon	ENSMUSG00000025982	ProperStrand	158	chr19	8800423	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-1.8610
chr9	57385425	57385441	protein_coding	2310046O06Rik	utr5	ENSMUSG00000032305	ProperStrand	135	chr4	140121137	140121153	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	1	-10.0431
chrX	71589884	71589906	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr10	90432660	90432676	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	1	-7.4656
chr1	75207532	75207549	protein_coding	Stk16	utr5	ENSMUSG00000026201	ProperStrand	17	chr16	23110531	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.8009
chr11	62270322	62270339	protein_coding	Ncor1	intron	ENSMUSG00000018501	ProperStrand	132	chr7	150794219	150794235	protein_coding	Tnfrsf26	utr3	ENSMUSG00000045362	ProperStrand	1	1	-inf
chr19	46107486	46107528	protein_coding	Ldb1	utr3	ENSMUSG00000025223	ProperStrand	42	chr9	15119733	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-5.6089
chr19	10607386	10607409	protein_coding	Cpsf7	exon	ENSMUSG00000034820	ProperStrand	66	chr16	23111450	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.1306
chr1	82019761	82019851	LINE	L1Md_F3	L1	chr1L1Md_F382019622	ProperStrand	1	chr1	82019511	82019601	LTR	RMER19A	ERVK	chr1RMER19A82019229	NonProperStrand	1	1	-inf
chr6	49067195	49067295	protein_coding	Igf2bp3	exon	ENSMUSG00000029814	ProperStrand	23	chr17	24857806	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.0279
chr18	4673435	4673505	protein_coding	9430020K01Rik	exon	ENSMUSG00000033960	ProperStrand	65	chr17	24857725	24857816	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.1639
chr9	120039312	120039472	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	chr11	62418017	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	2	-3.7499
chr17	34119882	34119899	LTR	RMER19A	ERVK	chr17RMER19A34119822	ProperStrand	1	chr2	26493383	26493475	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-inf
chr7	112852031	112852049	protein_coding	Dnhd1	exon	ENSMUSG00000030882	NonProperStrand	6	chr2	144087324	144087428	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	2	-17.7712
chr3	153574637	153574677	protein_coding	Rabggtb	intron	ENSMUSG00000038975	ProperStrand	667	chr1	89480739	89480755	protein_coding	Neu2	utr5	ENSMUSG00000079434	ProperStrand	6	1	-13.2539
chr1	173341933	173341949	protein_coding	Usf1	utr5	ENSMUSG00000026641	NonProperStrand	144	chr7	52715005	52715066	protein_coding	Ftl1	utr5	ENSMUSG00000050708	ProperStrand	807	1	-6.3790
chr1	179958168	179958227	snRNA	ENSMUSG00000065826_U6	.	ENSMUSG00000065826	ProperStrand	3	chrX	34622933	34623023	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-9.3485
chr11	98627173	98627257	protein_coding	Thra	intron	ENSMUSG00000058756	ProperStrand	63	chr18	35716812	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.0896
chr5	68513392	68513410	protein_coding	Grxcr1	intron	ENSMUSG00000068082	NonProperStrand	7	chr16	23111721	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-14.3771
chr14	55261428	55261518	protein_coding	Acin1	utr3	ENSMUSG00000022185	ProperStrand	67	chr4	131866155	131866235	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-3.4615
chr9	15119630	15119968	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	chr3	123210848	123210985	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	262	-inf
chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	chr4	116828379	116828453	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	2	-5.7637
chr5	141236460	141236543	protein_coding	Gna12	utr3	ENSMUSG00000000149	ProperStrand	54	chr5	147647476	147647512	protein_coding	Rpl21	exon	ENSMUSG00000041453	ProperStrand	112	1	-12.2728
chr8	49226153	49226179	protein_coding	Dctd	utr3	ENSMUSG00000031562	ProperStrand	10	chr4	131908356	131908408	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-11.3530
chr5	141415200	141415216	protein_coding	Card11	intron	ENSMUSG00000036526	NonProperStrand	3	chr2	130103751	130103770	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-14.8408
chr8	107794917	107794933	protein_coding	Hsf4	exon	ENSMUSG00000033249	ProperStrand	11	chr17	35299507	35299563	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-8.1746
chr3	117389812	117389829	protein_coding	4833424O15Rik	utr3	ENSMUSG00000033342	NonProperStrand	14	chr9	15119286	15119426	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-8.0181
chr4	90927880	90927901	protein_coding	Elavl2	intron	ENSMUSG00000008489	ProperStrand	52	chr18	80326680	80326780	protein_coding	Adnp2	exon	ENSMUSG00000053950	NonProperStrand	5	1	-18.7035
chr9	110868880	110868950	protein_coding	Lrrc2	intron	ENSMUSG00000032495	ProperStrand	8	chr16	96343601	96343659	protein_coding	Hmgn1	utr3	ENSMUSG00000040681	ProperStrand	38	1	-18.0100
chr5	115595228	115595287	protein_coding	Mlec	utr3	ENSMUSG00000048578	ProperStrand	47	chr5	108334221	108334311	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-5.2939
chr4	132052904	132052985	protein_coding	Sesn2	exon	ENSMUSG00000028893	ProperStrand	75	chrX	34622946	34623036	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-2.7739
chr3	85941900	85941986	protein_coding	Rps3a	utr3	ENSMUSG00000028081	ProperStrand	177	chr7	38354919	38354935	protein_coding	Zfp536	exon	ENSMUSG00000043456	NonProperStrand	236	1	-8.4020
chr17	65929974	65929990	protein_coding	Vapa	utr3	ENSMUSG00000024091	ProperStrand	24	chrX	132335862	132335974	protein_coding	Gprasp1	exon	ENSMUSG00000043384	ProperStrand	57	7	-19.4179
chr18	10052128	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr12	37040848	37040865	protein_coding	Sostdc1	utr5	ENSMUSG00000036169	NonProperStrand	13	1	-11.9131
chr18	36910914	36912104	protein_coding	Ik	exon	ENSMUSG00000024474	ProperStrand	60	chr12	72274177	72276918	protein_coding	2700049A03Rik	exon	ENSMUSG00000034601	ProperStrand	21	1	-15.4309
chr4	132928260	132928306	protein_coding	Slc9a1	intron	ENSMUSG00000028854	ProperStrand	28	chr8	73419405	73419525	protein_coding	Rpl18a	exon	ENSMUSG00000045128	ProperStrand	394	1	-11.0830
chr4	41146296	41146582	protein_coding	Ubap2	exon	ENSMUSG00000028433	ProperStrand	292	chr15	5192295	5192311	protein_coding	Ptger4	exon	ENSMUSG00000039942	NonProperStrand	8	1	-14.2707
chr19	11015616	11015632	protein_coding	Gpr44	exon	ENSMUSG00000034117	NonProperStrand	118	chr17	39985621	39985660	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-4.6192
chr13	18937204	18937760	protein_coding	Vps41	exon	ENSMUSG00000041236	ProperStrand	31	chr4	131908686	131908799	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-8.4322
chr7	26530226	26530249	protein_coding	Hnrnpul1	exon	ENSMUSG00000040725	ProperStrand	84	chr9	120039533	120039625	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.7182
chr4	134029463	134029521	protein_coding	Stmn1	utr3	ENSMUSG00000028832	ProperStrand	54	chr18	35714146	35714236	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-3.6373
chr5	46300108	46300126	LINE	Lx4B	L1	chr5Lx4B46300068	NonProperStrand	1	chr10	23505152	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-inf
chr13	58228603	58228643	protein_coding	Hnrnpa0	utr3	ENSMUSG00000007836	ProperStrand	110	chr5	15671953	15671971	protein_coding	Cacna2d1	intron	ENSMUSG00000040118	NonProperStrand	13	1	-15.2144
chr14	51427239	51427282	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr16	43886806	43886906	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	1	-2.2790
chr19	8897319	8897396	protein_coding	Hnrnpul2	exon	ENSMUSG00000071659	ProperStrand	93	chr7	117189883	117189973	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	8	-19.7436
chr1	133141328	133141345	protein_coding	Rassf5	exon	ENSMUSG00000026430	ProperStrand	73	chr10	39978346	39978485	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-5.0780
chr4	131865871	131865961	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr12	110919730	110919801	snoRNA	ENSMUSG00000065022_AF357341	.	ENSMUSG00000065022	ProperStrand	7	1	-5.7768
chrX	70203286	70203386	protein_coding	Nsdhl	utr3	ENSMUSG00000031349	ProperStrand	10	chr16	23110466	23110526	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.8693
chr4	132530098	132530117	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	4	-7.1676
chr17	24368324	24368400	protein_coding	Ccnf	exon	ENSMUSG00000072082	ProperStrand	149	chr9	120039540	120039562	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.7720
chr18	36885433	36885449	protein_coding	Cd14	exon	ENSMUSG00000051439	ProperStrand	65	chr19	8963027	8963083	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.1423
chr18	42435136	42435152	protein_coding	Rbm27	utr5	ENSMUSG00000024491	NonProperStrand	10	chr17	24857719	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	3	-13.5687
chr8	75016113	75016129	protein_coding	Slc35e1	utr5	ENSMUSG00000019731	ProperStrand	23	chr2	158184091	158184210	snoRNA	ENSMUSG00000064995_SNORA71	.	ENSMUSG00000064995	ProperStrand	430	1	-11.3090
chr7	117166712	117189909	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr7	117166722	117166860	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	27	-19.3977
chr11	119684318	119704996	antisense	A430071A18Rik	.	ENSMUSG00000085081	ProperStrand	8	chr16	23110875	23110940	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.2180
chr5	112865460	112865476	protein_coding	Sez6l	exon	ENSMUSG00000058153	ProperStrand	81	chr12	81492598	81492736	snoRNA	ENSMUSG00000088158_Scarna3b	.	ENSMUSG00000088158	ProperStrand	147	1	-10.9113
chr5	7997201	7997224	LINE	Lx4B	L1	chr5Lx4B7996956	NonProperStrand	2	chr11	106362569	106362635	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-14.8626
chr15	9001492	9013021	protein_coding	1110020G09Rik	exon	ENSMUSG00000022253	ProperStrand	15	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	1	-9.8309
chr12	110881049	110887902	lincRNA	Rian	intron	ENSMUSG00000091793	ProperStrand	612	chr1	162967491	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	3	-1.1818
chr16	56035865	56036001	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	chr7	118219665	118219740	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-1.4502
chr11	120009119	120012298	protein_coding	Slc38a10	exon	ENSMUSG00000061306	ProperStrand	91	chr16	23111388	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.7425
chr13	109178936	109178957	protein_coding	Depdc1b	utr3	ENSMUSG00000021697	ProperStrand	19	chr15	79913288	79913346	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-5.8137
chr2	32818850	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	chr12	31943858	31943938	snoRNA	ENSMUSG00000065200_SNORA65	.	ENSMUSG00000065200	ProperStrand	19	1	-7.7645
chr7	19722633	19722649	protein_coding	Fbxo46	utr3	ENSMUSG00000050428	NonProperStrand	24	chr4	131865856	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-8.4876
chr2	103619500	103619600	protein_coding	Caprin1	exon	ENSMUSG00000027184	ProperStrand	145	chr18	73693168	73693188	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-3.8359
chr17	34078444	34078591	protein_coding	Wdr46	exon	ENSMUSG00000024312	ProperStrand	19	chr4	131908236	131908298	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.3472
chr11	87172190	87172206	protein_coding	Ppm1e	exon	ENSMUSG00000046442	ProperStrand	112	chr1	88247793	88247877	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-3.9067
chr1	182865419	182866706	protein_coding	Lefty1	exon	ENSMUSG00000038793	ProperStrand	28	chr1	162965980	162966040	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-5.0576
chr2	31461245	31461278	protein_coding	Fubp3	intron	ENSMUSG00000026843	ProperStrand	35	chr9	120038467	120038519	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.0343
chr3	90227983	90236789	protein_coding	Ints3	exon	ENSMUSG00000027933	ProperStrand	87	chr17	13112468	13112548	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-3.8762
chr3	40807865	40807955	LTR	ORR1B1	MaLR	chr3ORR1B140807877	NonProperStrand	1	chr3	40807727	40807817	SINE	B2_Mm1t	B2	chr3B2_Mm1t40807666	NonProperStrand	1	1	-inf
chr9	57393029	57393109	protein_coding	Mpi	exon	ENSMUSG00000032306	ProperStrand	8	chr2	51967619	51967709	protein_coding	Rif1	exon	ENSMUSG00000036202	ProperStrand	201	1	-15.0195
chr12	75031736	75033320	protein_coding	Hif1a	exon	ENSMUSG00000021109	ProperStrand	20	chr6	115757992	115758082	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-7.6615
chr7	4746050	4746071	protein_coding	Rpl28	exon	ENSMUSG00000030432	ProperStrand	220	chr4	122968666	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-3.7805
chr3	108611706	108611727	protein_coding	Stxbp3a	intron	ENSMUSG00000027882	NonProperStrand	2	chr16	23111437	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-inf
chr7	3621698	3621756	protein_coding-noncoding	Tmc4	utr3	ENSMUSG00000019734	ProperStrand	1	chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	1	-inf
chr14	67633789	67633828	protein_coding	Ppp2r2a	utr3	ENSMUSG00000022052	ProperStrand	45	chr16	23111703	23111794	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-4.2245
chr1	133208267	133208286	protein_coding	Srgap2	intron	ENSMUSG00000026425	ProperStrand	299	chr10	110918565	110918633	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-0.9084
chrX	149108174	149108203	protein_coding	Shroom2	exon	ENSMUSG00000045180	ProperStrand	9	chr16	23110981	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.9939
chr16	44659864	44659954	SINE	B1_Mus1	Alu	chr16B1_Mus144659882	ProperStrand	1	chr16	44659696	44659786	SINE	B1_Mus2	Alu	chr16B1_Mus244659697	ProperStrand	1	1	-inf
chr7	151765212	151765228	antisense	Gm10574	.	ENSMUSG00000073778	ProperStrand	357	chr5	73151604	73151621	protein_coding	Tec	exon	ENSMUSG00000029217	ProperStrand	3	1	-16.1542
chr13	56571792	56571809	protein_coding	Slc25a48	exon	ENSMUSG00000021509	ProperStrand	9	chr4	140121137	140121153	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	1	-15.5495
chr9	57253860	57253877	SINE	B1_Mm	Alu	chr9B1_Mm57253847	ProperStrand	39	chr4	131908830	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.8599
chr1	66741087	66741103	protein_coding	Unc80	exon	ENSMUSG00000055567	NonProperStrand	212	chr11	62416598	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-2.8144
chr9	58305384	58305484	lincRNA	4930461G14Rik	intron	ENSMUSG00000086516	ProperStrand	9	chr11	69483136	69483195	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-6.0733
chr13	54203008	54203029	protein_coding	Sfxn1	utr3	ENSMUSG00000021474	ProperStrand	18	chr1	162967522	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-5.7965
chr14	58695284	58695301	protein_coding	Fgf9	intron	ENSMUSG00000021974	ProperStrand	11	chr8	73202403	73202503	protein_coding	Lsm4	utr3	ENSMUSG00000031848	ProperStrand	19	1	-18.7445
chr9	59516904	59526604	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr10	85855414	85855433	protein_coding	Syn3	intron	ENSMUSG00000059602	NonProperStrand	40	2	-12.7696
chr18	30463231	30463272	protein_coding	Pik3c3	exon	ENSMUSG00000033628	ProperStrand	7	chr17	35089182	35089231	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	2	-15.7747
chr1	78464606	78467675	protein_coding	Farsb	exon	ENSMUSG00000026245	ProperStrand	40	chr9	120039583	120039663	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	6	-19.6075
chr2	8759556	8759573	LINE	Lx	L1	chr2Lx8759488	ProperStrand	36	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-9.6209
chr19	59064715	59064732	protein_coding	4930506M07Rik	exon	ENSMUSG00000041362	ProperStrand	36	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.5578
chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-1.2633
chr2	146125209	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	chr4	143748332	143749010	protein_coding	Oog3	exon	ENSMUSG00000050810	NonProperStrand	78	1	-10.5378
chr1	173167399	173168187	protein_coding	Ndufs2	exon	ENSMUSG00000013593	ProperStrand	32	chr19	12086472	12086495	tRNA	tRNA109-ValTAC	.	823327	ProperStrand	96	1	-13.6387
chr3	104597043	104597143	protein_coding	Rhoc	utr3	ENSMUSG00000002233	ProperStrand	41	chr15	101926068	101926136	protein_coding	Eif4b	utr3	ENSMUSG00000058655	ProperStrand	484	1	-9.8999
chr9	15119722	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	chr17	71990923	71990999	snoRNA	ENSMUSG00000092713_CT010429.1	.	ENSMUSG00000092713	ProperStrand	182	1	-0.9512
chr1	182503924	182507725	protein_coding	Parp1	exon	ENSMUSG00000026496	ProperStrand	227	chr5	108334225	108334279	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	3	-6.3259
chr9	120038489	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	chr14	65372819	65372889	snoRNA	ENSMUSG00000064442_SNORA36	.	ENSMUSG00000064442	ProperStrand	296	2	-1.3946
chr17	34089435	34089516	protein_coding	Rps18	exon	ENSMUSG00000008668	ProperStrand	111	chr15	34370545	34370575	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-2.4556
chr6	31469752	31469840	protein_coding	Podxl	utr3	ENSMUSG00000025608	NonProperStrand	4	chr16	57391732	57391781	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	1	-15.9672
chr15	19495388	19495405	LINE	Lx5	L1	chr15Lx519494774	ProperStrand	5	chr7	116664793	116664869	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-7.4478
chr2	165623443	165623501	protein_coding	Zmynd8	exon	ENSMUSG00000039671	ProperStrand	81	chr4	116862585	116862662	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	3	-18.2124
chr8	73847831	73849790	protein_coding	Myo9b	exon	ENSMUSG00000004677	ProperStrand	78	chr4	131908236	131908297	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.0614
chr16	90961649	90961720	protein_coding	Synj1	exon	ENSMUSG00000022973	ProperStrand	16	chr17	24857802	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	7	-19.4813
chr5	23358027	23358096	snoRNA	ENSMUSG00000093321_Snord93	.	ENSMUSG00000093321	ProperStrand	218	chr5	74489565	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	2	-2.9261
chr17	56565117	56565145	protein_coding	Ptprs	exon	ENSMUSG00000013236	ProperStrand	152	chr16	23111695	23111785	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-1.3863
chr1	185857228	185857244	protein_coding	1700056E22Rik	exon	ENSMUSG00000044854	ProperStrand	173	chr1	162965531	162965601	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.5121
chr17	25288085	25288120	protein_coding	Clcn7	exon	ENSMUSG00000036636	ProperStrand	94	chr3	123210854	123210979	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.3802
chr1	133744502	133744518	protein_coding	Slc41a1	utr3	ENSMUSG00000013275	NonProperStrand	8	chr19	8798484	8798509	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-9.2953
chr8	4243981	4244031	protein_coding	Map2k7	exon	ENSMUSG00000002948	ProperStrand	32	chr16	23110902	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-3.1962
chr16	17090199	17091305	protein_coding	Ppil2	exon	ENSMUSG00000022771	ProperStrand	6	chr1	162965980	162966041	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	3	-18.7715
chrX	7514469	7514510	protein_coding	Hdac6	exon	ENSMUSG00000031161	ProperStrand	42	chr16	33058786	33058838	protein_coding	Rpl35a	exon	ENSMUSG00000060636	ProperStrand	33	1	-15.2280
chr4	134883058	134883132	protein_coding	Srrm1	exon	ENSMUSG00000028809	ProperStrand	142	chr18	75161534	75161596	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-5.5060
chr3	82816757	82816774	protein_coding	Fgg	exon	ENSMUSG00000033860	NonProperStrand	321	chr4	116875182	116875249	snRNA	ENSMUSG00000070228_U5	.	ENSMUSG00000070228	ProperStrand	131	1	-8.3896
chr2	49344313	49368739	protein_coding	Epc2	exon	ENSMUSG00000069495	ProperStrand	15	chr14	31827478	31827516	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	4	-inf
chr8	34693168	34693184	protein_coding	Tex15	exon	ENSMUSG00000009628	NonProperStrand	31	chr16	91270625	91270642	protein_coding	Olig1	exon	ENSMUSG00000046160	NonProperStrand	32	1	-15.8858
chr2	167836657	167836680	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	chr2	38567315	38567333	protein_coding	Nr5a1	intron	ENSMUSG00000026751	NonProperStrand	2	1	-19.8743
chr18	20200066	20200201	protein_coding	Dsc2	exon	ENSMUSG00000024331	ProperStrand	4	chr4	123149421	123149517	protein_coding	Macf1	exon	ENSMUSG00000028649	ProperStrand	320	1	-15.6234
chr7	116664793	116664924	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	chr17	35087893	35087964	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	36	-3.0901
chr16	32650735	32650775	protein_coding	Tnk2	intron	ENSMUSG00000022791	ProperStrand	86	chr11	69483237	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-3.3922
chr7	111488603	111488622	protein_coding	Trim12c	utr3	ENSMUSG00000057143	ProperStrand	28	chr2	26493366	26493420	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-8.5846
chr4	43505767	43505847	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr4	61982078	61983289	protein_coding	Fkbp15	exon	ENSMUSG00000066151	ProperStrand	10	1	-6.5547
chr1	177622596	177622614	protein_coding	Opn3	exon	ENSMUSG00000026525	ProperStrand	31	chr1	162966010	162966041	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-4.8589
chr7	53854058	53854076	protein_coding	Sergef	intron	ENSMUSG00000030839	ProperStrand	7	chr11	55296208	55296287	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-10.5753
chr14	73923217	73924869	protein_coding	Nudt15	exon	ENSMUSG00000033405	ProperStrand	2	chr18	35716786	35716876	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-9.2832
chr11	54725031	54725061	protein_coding	Tnip1	utr3	ENSMUSG00000020400	ProperStrand	52	chr11	97642952	97643047	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-7.0885
chr17	29813208	29816027	protein_coding	Ftsjd2	exon	ENSMUSG00000024019	ProperStrand	31	chr1	145506238	145506255	protein_coding	Cdc73	intron	ENSMUSG00000026361	NonProperStrand	26	1	-16.3128
chr16	23111416	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	NonProperStrand	38	chr6	115758042	115758118	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	NonProperStrand	4	1	-20.3224
chr17	35296328	35296784	protein_coding	Prrc2a	exon	ENSMUSG00000024393	ProperStrand	315	chr12	17552950	17553030	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-2.0784
chr13	47124534	47124644	protein_coding	Tpmt	intron	ENSMUSG00000021376	ProperStrand	10	chr3	123210853	123210877	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.4047
chr7	86604721	86604997	protein_coding	Polg	exon	ENSMUSG00000039176	ProperStrand	93	chr1	162966189	162966269	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-6.7054
chr6	50169381	50169397	protein_coding	Dfna5	exon	ENSMUSG00000029821	ProperStrand	4	chr9	36671098	36671114	protein_coding	Fez1	exon	ENSMUSG00000032118	ProperStrand	5	1	-20.6224
chr5	112865459	112865478	protein_coding	Sez6l	exon	ENSMUSG00000058153	ProperStrand	81	chr8	98269984	98270096	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-4.9582
chr2	26767015	26767552	protein_coding	Rpl7a	exon	ENSMUSG00000062647	ProperStrand	234	chr18	33954816	33954896	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-1.2629
chr3	102851088	102853576	protein_coding	Csde1	exon	ENSMUSG00000068823	ProperStrand	122	chr16	23110456	23110528	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.3482
chr11	119967126	119967209	protein_coding	Slc38a10	exon	ENSMUSG00000061306	ProperStrand	91	chr11	55296239	55296275	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-5.3639
chr7	133296520	133296536	protein_coding	Xpo6	exon	ENSMUSG00000000131	NonProperStrand	2	chr15	82980099	82980166	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-14.5989
chr7	36561108	36561165	protein_coding	Zfp507	exon	ENSMUSG00000044452	ProperStrand	66	chr4	120820434	120820481	protein_coding	Rlf	exon	ENSMUSG00000049878	ProperStrand	58	1	-13.1900
chr11	86098678	86098696	protein_coding	Med13	exon	ENSMUSG00000034297	ProperStrand	23	chr16	23110911	23110963	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.4133
chr2	70507261	70507289	protein_coding	Gorasp2	intron	ENSMUSG00000014959	ProperStrand	21	chr4	131908236	131908276	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.1622
chr11	50048287	50048387	protein_coding	Mgat4b	utr3	ENSMUSG00000036620	ProperStrand	10	chr16	23110880	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.7978
chr12	89511041	89511131	protein_coding	Gm5662	intron	ENSMUSG00000072905	ProperStrand	3	chr9	15119670	15119750	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-8.7352
chr16	20606093	20606219	protein_coding	Alg3	intron	ENSMUSG00000033809	ProperStrand	49	chr7	148634799	148634826	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-7.2958
chr19	57435752	57435769	protein_coding	Fam160b1	utr5	ENSMUSG00000033478	ProperStrand	49	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-12.0942
chr4	148538712	148538812	protein_coding	Pgd	intron	ENSMUSG00000028961	ProperStrand	34	chr2	26494708	26494762	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.1609
chr11	87614627	87614643	antisense	Gm11505	.	ENSMUSG00000085872	ProperStrand	37	chr1	162968442	162968476	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-7.0387
chr7	26009607	26009697	protein_coding	Zfp526	exon	ENSMUSG00000046541	ProperStrand	19	chr7	116664802	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	14	-inf
chr5	111143958	111143982	protein_coding	Ep400	intron	ENSMUSG00000029505	NonProperStrand	4	chr9	123763783	123763799	protein_coding	Xcr1	utr3	ENSMUSG00000060509	NonProperStrand	40	1	-19.1548
chr14	76926611	76926627	LINE	L1MB3	L1	chr14L1MB376926376	ProperStrand	61	chr3	131306092	131306176	protein_coding	Papss1	utr3	ENSMUSG00000028032	ProperStrand	11	1	-16.6801
chr11	120148960	120148976	protein_coding	Bahcc1	exon	ENSMUSG00000039741	NonProperStrand	268	chr1	88247812	88247863	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-2.3510
chr1	71697218	71697234	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr4	56910538	56910618	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	4	-5.3457
chr3	135268101	135268119	protein_coding	Nfkb1	exon	ENSMUSG00000028163	ProperStrand	55	chr5	75473198	75473215	protein_coding	Gsx2	utr3	ENSMUSG00000035946	ProperStrand	307	1	-10.2168
chr2	162906523	162908287	protein_coding	Mybl2	exon	ENSMUSG00000017861	ProperStrand	230	chr1	162966000	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-2.5763
chr11	102060738	102060754	protein_coding	Hdac5	exon	ENSMUSG00000008855	NonProperStrand	39	chr8	32260335	32260422	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-5.4666
chr11	24066154	24066170	antisense	4930538E20Rik	.	ENSMUSG00000085516	ProperStrand	6	chr5	108334195	108334246	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	2	-15.2946
chr11	55296208	55296256	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	chr7	88674835	88674867	snoRNA	ENSMUSG00000093107_AC167122.1	.	ENSMUSG00000093107	ProperStrand	110	2	-8.2310
chr11	67167096	67167112	protein_coding	Myh13	exon	ENSMUSG00000060180	ProperStrand	145	chr18	35716762	35716787	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-0.8959
chr17	56107026	56107044	protein_coding	Ccdc94	exon	ENSMUSG00000003208	ProperStrand	14	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-11.5510
chr11	29446382	29446400	protein_coding	Rps27a	exon	ENSMUSG00000020460	ProperStrand	47	chr16	23111452	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.6112
chr10	91625008	91625024	lincRNA	Gm17341	exon	ENSMUSG00000090454	ProperStrand	1	chr14	105554103	105554120	protein_coding	Rbm26	exon	ENSMUSG00000022119	ProperStrand	60	1	-inf
chr7	150466710	150466810	protein_coding	Kcnq1	intron	ENSMUSG00000009545	NonProperStrand	133	chr16	23111449	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-0.8822
chr12	110881051	110888948	lincRNA	Rian	intron	ENSMUSG00000091793	ProperStrand	612	chr11	6428058	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-0.8865
chr4	122924412	122924429	protein_coding	Heyl	utr3	ENSMUSG00000032744	ProperStrand	31	chr17	24857727	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-5.9316
chr17	47625582	47625626	protein_coding	Taf8	utr3	ENSMUSG00000023980	ProperStrand	25	chr19	8963087	8963187	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.8447
chr2	121854571	121866915	protein_coding	Eif3j	exon	ENSMUSG00000027236	ProperStrand	15	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.0842
chr19	40947560	40947579	lincRNA	E030007J07Rik	exon	ENSMUSG00000087183	NonProperStrand	1	chr17	26645268	26645298	protein_coding	Dusp1	utr5	ENSMUSG00000024190	ProperStrand	16	1	-inf
chr15	83206921	83206976	protein_coding	Pacsin2	utr3	ENSMUSG00000016664	ProperStrand	30	chr15	77597977	77597993	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	1	-10.2055
chr6	90612914	90612932	protein_coding	Iqsec1	exon	ENSMUSG00000034312	NonProperStrand	9	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-6.9084
chr14	64112630	64112661	protein_coding	Tdh	exon	ENSMUSG00000021953	ProperStrand	67	chr17	24857796	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.1142
chr8	28164868	28164958	protein_coding	Prosc	utr3	ENSMUSG00000031485	NonProperStrand	2	chr10	116715725	116717734	protein_coding	Lyz2	exon	ENSMUSG00000069516	NonProperStrand	2	1	-inf
chr2	163687258	163687291	protein_coding	Rims4	utr3	ENSMUSG00000035226	ProperStrand	7	chr1	89681150	89681232	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-9.8184
chr4	127925754	127925771	protein_coding	Csmd2	intron	ENSMUSG00000028804	NonProperStrand	34	chr4	131908689	131908807	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.0811
chr6	27766713	27766731	protein_coding	Grm8	intron	ENSMUSG00000024211	ProperStrand	15	chr14	57204539	57204555	protein_coding	Parp4	exon	ENSMUSG00000054509	NonProperStrand	113	1	-14.8768
chr11	18353704	18353722	LTR	ORR1D2-int	MaLR	chr11ORR1D2-int18353633	ProperStrand	1	chr1	162966813	162966843	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-inf
chr7	29601110	29601187	protein_coding-noncoding	Hnrnpl	utr5	ENSMUSG00000015165	ProperStrand	23	chr2	26768404	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-7.5105
chr5	68022807	68038940	protein_coding	Atp8a1	exon	ENSMUSG00000037685	ProperStrand	20	chr4	131908254	131908344	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.2521
chr3	96363929	96364142	protein_coding	Txnip	exon	ENSMUSG00000038393	ProperStrand	172	chr13	51743665	51743703	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-4.8007
chr12	56496979	56497069	protein_coding	Psma6	intron	ENSMUSG00000021024	ProperStrand	13	chr8	73419555	73419841	protein_coding	Rpl18a	exon	ENSMUSG00000045128	NonProperStrand	2	1	-inf
chr11	101306551	101306641	protein_coding	Rpl27	exon	ENSMUSG00000063316	ProperStrand	96	chr9	120039588	120039668	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.4880
chr9	95525013	95525035	antisense	Gm16126	.	ENSMUSG00000086585	NonProperStrand	229	chr11	50014086	50014147	protein_coding	Sqstm1	utr3	ENSMUSG00000015837	ProperStrand	36	1	-11.6586
chr15	99638124	99638156	protein_coding	Lima1	exon	ENSMUSG00000023022	ProperStrand	159	chr7	73318180	73318219	protein_coding	Chsy1	utr3	ENSMUSG00000032640	ProperStrand	25	2	-19.1614
chr2	89368462	89368479	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	chr5	130295415	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	6	-14.3322
chr11	72262654	72262830	protein_coding	Mybbp1a	exon	ENSMUSG00000040463	ProperStrand	279	chrX	131072473	131072498	protein_coding	Timm8a1	utr3	ENSMUSG00000048007	ProperStrand	6	2	-19.1942
chr15	102316412	102317559	protein_coding	Pcbp2	exon	ENSMUSG00000056851	NonProperStrand	2	chr16	23110963	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	NonProperStrand	93	1	-20.0851
chr5	125499207	125499256	protein_coding	Ncor2	exon	ENSMUSG00000029478	ProperStrand	377	chr7	112533563	112533579	protein_coding	Fam160a2	exon	ENSMUSG00000044465	ProperStrand	85	3	-19.0826
chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr11	77995189	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	2	-1.0754
chr17	22985190	22985206	protein_coding	Zfp945	utr3	ENSMUSG00000059142	ProperStrand	10	chr11	69481383	69481473	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-6.6979
chr11	102294590	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr5	65781634	65781707	protein_coding	Rpl9	exon	ENSMUSG00000047215	ProperStrand	113	2	-12.2055
chr2	179912223	179912239	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr8	87522147	87522188	protein_coding	Hook2	exon	ENSMUSG00000052566	ProperStrand	204	1	-7.2547
chr1	180259440	180262026	protein_coding	Hnrnpu	exon	ENSMUSG00000039630	ProperStrand	286	chr14	76247743	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	3	-4.3333
chr5	145509891	145509908	protein_coding	Tmem130	intron	ENSMUSG00000043388	ProperStrand	26	chr1	162967506	162967553	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-5.0673
chr6	122680146	122681423	protein_coding	Slc2a3	exon	ENSMUSG00000003153	ProperStrand	682	chr7	19849859	19850023	protein_coding	Vasp	exon	ENSMUSG00000030403	ProperStrand	28	1	-9.9874
chr1	182509489	182530892	protein_coding	Parp1	utr3	ENSMUSG00000026496	ProperStrand	227	chr16	23110851	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	10	-1.1056
chr15	58274406	58274456	protein_coding	D15Ertd621e	exon	ENSMUSG00000037119	ProperStrand	26	chr7	116663748	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-6.8095
chr7	135882144	135882163	protein_coding	Mcmbp	intron	ENSMUSG00000048170	ProperStrand	87	chr16	23111392	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-1.6250
chr11	103511201	103511217	protein_coding	Rprml	exon	ENSMUSG00000046215	ProperStrand	16	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.8202
chr2	26493364	26493388	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr19	46144108	46144165	protein_coding	Pprc1	exon	ENSMUSG00000055491	ProperStrand	143	1	-4.5079
chr18	68002927	68007014	protein_coding	Cep192	exon	ENSMUSG00000024542	ProperStrand	59	chr16	17325549	17326059	protein_coding	Pi4ka	exon	ENSMUSG00000041720	ProperStrand	39	1	-14.2111
chr10	93446823	93446844	protein_coding	Vezt	intron	ENSMUSG00000036099	NonProperStrand	4	chr10	23505563	23505626	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-13.2148
chr15	99556355	99556372	protein_coding	2310016M24Rik	intron	ENSMUSG00000023020	NonProperStrand	7	chr7	29136525	29136577	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-6.5022
chr9	96980875	96985485	protein_coding	Slc25a36	exon	ENSMUSG00000032449	ProperStrand	159	chr3	123210854	123210894	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-0.7198
chr16	23111694	23111784	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	chr6	125071741	125071823	snoRNA	ENSMUSG00000088208_SCARNA11	.	ENSMUSG00000088208	ProperStrand	113	1	-0.9982
chr2	5604169	5604193	protein_coding	Camk1d	intron	ENSMUSG00000039145	ProperStrand	50	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-8.0921
chr15	38226534	38226572	protein_coding	Klf10	exon	ENSMUSG00000037465	ProperStrand	33	chr7	116663667	116663714	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.5837
chr10	41644311	41644329	protein_coding	Armc2	exon	ENSMUSG00000071324	ProperStrand	281	chr8	129468745	129468797	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-1.7028
chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	chr4	116827019	116827260	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	1	-6.5124
chr5	131382513	131382529	protein_coding	Wbscr17	exon	ENSMUSG00000034040	ProperStrand	13	chr11	6519816	6519932	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-11.0507
chr14	33153891	33154395	protein_coding	Ogdhl	exon	ENSMUSG00000021913	ProperStrand	182	chr18	82662186	82662202	protein_coding	Mbp	intron	ENSMUSG00000041607	NonProperStrand	185	1	-8.8315
chr5	32384966	32384984	protein_coding	Bre	intron	ENSMUSG00000052139	ProperStrand	33	chr15	34370545	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	9	-19.6792
chrX	143918833	143918964	snoRNA	ENSMUSG00000084421_SNORA35	.	ENSMUSG00000084421	ProperStrand	293	chr16	23110841	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	17	-2.8104
chr14	80262508	80262525	lincRNA	Gm6999	intron	ENSMUSG00000075495	ProperStrand	265	chr8	125730056	125730122	protein_coding	Chmp1a	exon	ENSMUSG00000000743	ProperStrand	4	1	-16.0141
chr19	3680830	3680903	protein_coding	Lrp5	intron	ENSMUSG00000024913	ProperStrand	145	chr17	35299551	35299641	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	3	-7.9060
chr9	119350984	119351027	lincRNA	Gm16707	exon	ENSMUSG00000086780	NonProperStrand	17	chr9	15119646	15119712	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.9895
chr2	158185576	158185655	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr4	131865381	131865506	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	22	-15.3110
chr3	32954538	32954555	protein_coding	Pex5l	intron	ENSMUSG00000027674	ProperStrand	52	chr7	133940942	133941012	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	1	-8.6274
chr5	139676751	139676811	protein_coding	Sun1	intron	ENSMUSG00000036817	ProperStrand	108	chr16	23110964	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-0.7825
chr11	50110634	50110792	protein_coding	Canx	exon	ENSMUSG00000020368	ProperStrand	296	chr15	82725599	82725637	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	1	-5.3696
chr18	3429223	3429323	protein_coding	Cul2	intron	ENSMUSG00000024231	ProperStrand	16	chr18	35716811	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.5854
chr1	60466567	60466587	protein_coding	Abi2	utr5	ENSMUSG00000026782	ProperStrand	15	chr11	69483190	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-5.0353
chr10	6063958	6063975	protein_coding	Akap12	intron	ENSMUSG00000038587	ProperStrand	1008	chr7	117189863	117189944	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-1.2039
chr11	106852176	106852457	protein_coding	Kpna2	exon	ENSMUSG00000018362	ProperStrand	70	chr15	76003513	76003603	protein_coding	Plec	exon	ENSMUSG00000022565	ProperStrand	186	1	-10.7337
chr1	55146007	55147610	protein_coding	Hspe1	exon	ENSMUSG00000073676	ProperStrand	31	chr19	8799861	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-6.2435
chr4	141497461	141497479	protein_coding	Fhad1	intron	ENSMUSG00000051435	ProperStrand	8	chr5	108334195	108334289	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-8.8896
chrX	162948328	162948346	protein_coding	Tceanc	utr5	ENSMUSG00000051224	NonProperStrand	2	chr11	6428060	6428088	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-inf
chr13	35964573	35964598	protein_coding	Cdyl	utr3	ENSMUSG00000059288	ProperStrand	18	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.5789
chr2	90235286	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	38869531	38869547	protein_coding	Noc3l	exon	ENSMUSG00000024999	NonProperStrand	149	3	-7.1896
chr1	115800767	115800803	lincRNA	9330185C12Rik	intron	ENSMUSG00000086520	ProperStrand	45	chr10	23505152	23505234	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-3.0673
chr4	117554417	117555755	protein_coding	B4galt2	utr5	ENSMUSG00000028541	ProperStrand	11	chr18	63109676	63109692	protein_coding	Apcdd1	exon	ENSMUSG00000071847	NonProperStrand	254	1	-13.8848
chr14	63287583	63287614	protein_coding	Serpine3	intron	ENSMUSG00000091155	ProperStrand	210	chr5	121655016	121655099	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-1.6062
chr5	121655127	121655157	protein_coding	Rpl6	intron	ENSMUSG00000029614	ProperStrand	332	chr6	91685132	91685199	protein_coding	Slc6a6	exon	ENSMUSG00000030096	ProperStrand	206	5	-19.4311
chr1	194571791	194571881	snRNA	ENSMUSG00000064881_U5	.	ENSMUSG00000064881	ProperStrand	187	chr7	116664794	116664874	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-0.8627
chr7	110114018	110114034	protein_coding	Olfr576	exon	ENSMUSG00000073962	NonProperStrand	79	chr17	23687227	23687268	tRNA	tRNA994-ArgCCG	.	1759933	ProperStrand	60	1	-12.7632
chr13	23831070	23831170	protein_coding	Hist1h1c	exon	ENSMUSG00000036181	ProperStrand	99	chr7	116663713	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.6976
chr2	170322357	170322374	protein_coding	Pfdn4	intron	ENSMUSG00000052033	ProperStrand	55	chr15	98350206	98350271	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-4.9285
chr6	28838282	28838393	protein_coding	Snd1	utr3	ENSMUSG00000001424	ProperStrand	210	chr16	34986602	34986619	protein_coding	Mylk	exon	ENSMUSG00000022836	NonProperStrand	56	3	-inf
chr9	103401280	103401296	protein_coding	Tmem108	exon	ENSMUSG00000042757	NonProperStrand	323	chr1	162965980	162965999	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-1.8320
chr8	97848774	97848874	protein_coding	Tepp	intron	ENSMUSG00000090206	ProperStrand	11	chr10	23505152	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	7	-20.9383
chr6	143026845	143026864	protein_coding	5730419I09Rik	exon	ENSMUSG00000030279	ProperStrand	81	chr4	122968620	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-5.6908
chr15	79913287	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr1	72290907	72290975	snRNA	ENSMUSG00000093111_AC120136.1	.	ENSMUSG00000093111	ProperStrand	137	4	-7.9978
chr10	115978001	115978074	protein_coding	Cnot2	intron	ENSMUSG00000020166	ProperStrand	12	chr11	62416635	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-8.3961
chr16	57391760	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr9	50425280	50425298	protein_coding	AU019823	utr5	ENSMUSG00000059820	ProperStrand	5	1	-12.9513
chr3	41419123	41419218	protein_coding	Phf17	utr3	ENSMUSG00000025764	ProperStrand	101	chr15	34370604	34370627	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-2.6172
chr8	4289674	4289728	protein_coding	Elavl1	exon	ENSMUSG00000040028	ProperStrand	39	chr2	158182156	158182190	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-5.8451
chr3	105265054	105265072	protein_coding	Kcnd3	intron	ENSMUSG00000040896	NonProperStrand	44	chr1	162966189	162966213	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-8.1968
chr11	106112301	106112318	protein_coding	Ftsj3	exon	ENSMUSG00000020706	ProperStrand	64	chr7	116664872	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.4384
chr9	64852263	64852281	protein_coding	Ptplad1	intron	ENSMUSG00000033629	NonProperStrand	5	chr6	70805456	70805573	snoRNA	ENSMUSG00000065750_SNORA5	.	ENSMUSG00000065750	ProperStrand	165	1	-16.3967
chr19	53317109	53318891	protein_coding	Add3	exon	ENSMUSG00000025026	ProperStrand	27	chr9	15118528	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	1	-10.9551
chr10	17443077	17443094	protein_coding	Cited2	utr5	ENSMUSG00000039910	ProperStrand	64	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-7.0746
chr17	32197416	32197432	protein_coding	Rrp1b	exon	ENSMUSG00000058392	NonProperStrand	39	chr5	108336363	108336417	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-5.7217
chr11	72257301	72257347	protein_coding	Mybbp1a	exon	ENSMUSG00000040463	ProperStrand	279	chr1	73961169	73961203	protein_coding	Tns1	exon	ENSMUSG00000055322	ProperStrand	63	3	-20.0265
chr10	90615473	90615835	protein_coding	Tmpo	exon	ENSMUSG00000019961	NonProperStrand	5	chr2	70927899	70927915	protein_coding	Dcaf17	exon	ENSMUSG00000041966	NonProperStrand	89	1	-17.8212
chr11	20012671	20012690	protein_coding	Actr2	intron	ENSMUSG00000020152	NonProperStrand	17	chr2	24739788	24739804	protein_coding	Ehmt1	exon	ENSMUSG00000036893	NonProperStrand	16	1	-19.0665
chr17	24665420	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	chr9	64024513	64024567	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	2	-1.6688
chr2	8759556	8759573	LINE	Lx	L1	chr2Lx8759488	ProperStrand	36	chr11	69481428	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-4.1502
chr4	55431651	55431667	lincRNA	Gm12505	exon	ENSMUSG00000087070	ProperStrand	447	chr17	33960262	33961283	protein_coding	Rps28	exon	ENSMUSG00000067288	ProperStrand	52	1	-9.5797
chr11	70477964	70478108	protein_coding	Spag7	exon	ENSMUSG00000018287	ProperStrand	6	chr1	162967543	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-8.0824
chr8	75090105	75090134	protein_coding	9130011J15Rik	utr3	ENSMUSG00000044600	ProperStrand	9	chr2	66137843	66140427	protein_coding	Scn1a	exon	ENSMUSG00000064329	ProperStrand	25	1	-18.8861
chr18	10052133	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr8	74446729	74446745	protein_coding	Zfp617	intron	ENSMUSG00000066880	NonProperStrand	208	1	-6.3313
chr13	6598031	6599880	protein_coding	Pfkp	exon	ENSMUSG00000021196	ProperStrand	197	chr18	33954817	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	3	-4.3845
chr13	62944660	62944677	protein_coding	Fbp2	intron	ENSMUSG00000021456	ProperStrand	100	chr1	162968441	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	2	-8.3609
chr4	149786507	149786523	protein_coding	Rere	intron	ENSMUSG00000039852	NonProperStrand	12	chr15	79471138	79471155	protein_coding	4933432B09Rik	exon	ENSMUSG00000042564	ProperStrand	25	1	-18.2437
chr2	4829164	4829180	protein_coding	Sephs1	utr3	ENSMUSG00000026662	NonProperStrand	271	chrX	70962861	70962878	protein_coding	Abcd1	exon	ENSMUSG00000031378	ProperStrand	12	1	-13.5761
chr11	97641498	97641578	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	chr12	106269288	106269378	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	29	-19.8047
chr5	34326445	34326463	protein_coding	Gm1673	exon	ENSMUSG00000070858	NonProperStrand	4	chr4	131865855	131865901	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.0048
chr10	75398672	75399115	protein_coding	Chchd10	utr5	ENSMUSG00000049422	ProperStrand	140	chr16	23110909	23110994	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	14	-7.2902
chr2	167309992	167310009	protein_coding	Spata2	exon	ENSMUSG00000047030	NonProperStrand	6	chr7	109149271	109149287	protein_coding	Numa1	exon	ENSMUSG00000066306	NonProperStrand	171	1	-15.9218
chr7	51894670	51894731	protein_coding	Myh14	exon	ENSMUSG00000030739	ProperStrand	29	chr9	15118335	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	3	-11.5565
chr11	61157943	61157977	protein_coding	Slc47a1	exon	ENSMUSG00000010122	ProperStrand	2	chr4	106164708	106164724	protein_coding	Bsnd	utr5	ENSMUSG00000025418	ProperStrand	22	1	-inf
chr8	131256023	131256077	protein_coding	Itgb1	utr3	ENSMUSG00000025809	ProperStrand	35	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-7.0419
chr11	69481233	69481542	protein_coding	Eif4a1	exon	ENSMUSG00000059796	ProperStrand	108	chr12	17552959	17553012	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	2	-6.6656
chr9	47659061	47659093	protein_coding	Cadm1	utr3	ENSMUSG00000032076	ProperStrand	77	chr4	122970487	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	2	-11.1397
chr2	79132657	79132674	protein_coding-noncoding	Itga4	utr5	ENSMUSG00000027009	NonProperStrand	118	chr9	120039533	120039617	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-3.8395
chr11	83107807	83107846	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	chr2	144087332	144087376	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-2.3555
chr14	52628204	52628294	protein_coding	Zfp219	exon	ENSMUSG00000049295	ProperStrand	27	chr2	158182201	158182278	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-6.5761
chr6	137694071	137694161	protein_coding	Strap	exon	ENSMUSG00000030224	ProperStrand	27	chr3	98138548	98143660	protein_coding	Phgdh	exon	ENSMUSG00000053398	ProperStrand	46	3	-inf
chr6	119942364	119942413	protein_coding	Wnk1	exon	ENSMUSG00000045962	ProperStrand	221	chr8	112363200	112363274	snoRNA	ENSMUSG00000077549_Snord71	.	ENSMUSG00000077549	ProperStrand	196	2	-13.2572
chr2	90235294	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr18	35732434	35732499	protein_coding	Matr3	exon	ENSMUSG00000037236	ProperStrand	90	1	-3.6990
chr7	26172302	26172333	protein_coding	Lipe	intron	ENSMUSG00000003123	ProperStrand	24	chr5	121655016	121655080	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.5126
chr5	121885475	121885565	protein_coding	Naa25	exon	ENSMUSG00000042719	ProperStrand	95	chr5	130300472	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	6	-11.3916
chr11	102662460	102662476	protein_coding	Gjc1	exon	ENSMUSG00000034520	NonProperStrand	39	chr11	106362638	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-8.2669
chr16	3856858	3856877	protein_coding	Zfp174	utr3	ENSMUSG00000054939	NonProperStrand	166	chr11	51551280	51551375	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	1	-5.6892
chr8	127160437	127160551	protein_coding	2310022B05Rik	utr3	ENSMUSG00000031983	ProperStrand	10	chr1	162965999	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-7.1350
chr8	26763614	26763655	protein_coding	Whsc1l1	intron	ENSMUSG00000054823	ProperStrand	36	chr16	23111712	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-4.8359
chr13	9833552	9833668	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	mmu-miR-26a-5p	0	22	miRNA	mmu-miR-26a-5p	.	mmu-miR-26a-5p	ProperStrand	4	3	-20.4649
chr15	98687986	98688033	protein_coding	Mll2	exon	ENSMUSG00000048154	ProperStrand	170	chr9	63066908	63066926	protein_coding	Map2k5	intron	ENSMUSG00000058444	NonProperStrand	79	1	-10.6706
chr4	140121137	140121153	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	chr7	116663634	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.2386
chr9	122895680	122895696	protein_coding	Kif15	exon	ENSMUSG00000036768	ProperStrand	46	chr3	123210857	123210911	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.5110
chr1	24621179	24621256	protein_coding	Gm10925	utr3	ENSMUSG00000090378	ProperStrand	320	chr12	81618871	81618892	snoRNA	ENSMUSG00000093141_AC163282.1	.	ENSMUSG00000093141	ProperStrand	39	1	-10.8271
chr15	58778947	58779050	protein_coding	Mtss1	exon	ENSMUSG00000022353	ProperStrand	68	chr7	16534823	16534839	protein_coding	Ehd2	utr3	ENSMUSG00000074364	NonProperStrand	197	1	-10.6768
chr13	58228685	58228775	protein_coding	Hnrnpa0	utr3	ENSMUSG00000007836	ProperStrand	110	chr11	69481348	69481384	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-2.1512
chr9	44655904	44655966	protein_coding	Mll1	exon	ENSMUSG00000002028	ProperStrand	151	chr4	116826699	116826758	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	4	-15.4331
chr3	89823247	89824888	protein_coding	Ubap2l	exon	ENSMUSG00000042520	ProperStrand	88	chr11	62416960	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	4	-16.3010
chr15	79848177	79848278	SINE	B3	B2	chr15B379848190	ProperStrand	1	chr10	7482609	7482625	protein_coding	Katna1	utr3	ENSMUSG00000019794	ProperStrand	14	1	-inf
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr8	112363199	112363232	snoRNA	ENSMUSG00000077549_Snord71	.	ENSMUSG00000077549	ProperStrand	196	1	-6.2556
chr19	5891296	5891335	protein_coding	Tigd3	utr3	ENSMUSG00000044390	NonProperStrand	1	chr7	116664819	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-inf
chr15	98356818	98356913	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	chr7	116664794	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	9	-1.5247
chr5	18733281	18733297	protein_coding	Magi2	exon	ENSMUSG00000040003	ProperStrand	49	chr9	120038466	120038529	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.4063
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr7	28061791	28061807	protein_coding	Numbl	exon	ENSMUSG00000063160	NonProperStrand	9	1	-10.8985
chr1	162966185	162966213	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	chr17	35088957	35089016	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-0.9178
chr2	62141921	62141938	protein_coding	Slc4a10	exon	ENSMUSG00000026904	NonProperStrand	4	chr4	131908689	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-6.2660
chr19	41083705	41083723	SINE	B3A	B2	chr19B3A41083596	NonProperStrand	5	chr11	62416578	62416596	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	1	-14.1333
chr12	8010151	8010206	protein_coding	Apob	exon	ENSMUSG00000020609	ProperStrand	10	chr17	35089182	35089210	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	3	-18.6923
chr2	90235294	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	32818817	32818939	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	8	-0.7915
chr8	67632210	67632226	protein_coding	BC030870	exon	ENSMUSG00000074300	ProperStrand	2	chr16	23110892	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr9	21392874	21392957	protein_coding	Carm1	utr3	ENSMUSG00000032185	ProperStrand	82	chr7	118219574	118219594	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-6.0868
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	1	-2.8338
chr6	128446699	128446716	protein_coding	Pzp	exon	ENSMUSG00000030359	ProperStrand	1	chr16	23110840	23110860	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr6	92101150	92101168	protein_coding	Nr2c2	intron	ENSMUSG00000005893	ProperStrand	101	chr19	8963031	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-9.1112
chr1	55137046	55137163	protein_coding	Hspd1	exon	ENSMUSG00000025980	ProperStrand	140	chr9	15119684	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	8	-13.6823
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr17	25958024	25958040	protein_coding	Fbxl16	utr3	ENSMUSG00000025738	ProperStrand	12	1	-9.1521
chr2	53003875	53003891	protein_coding	Prpf40a	exon	ENSMUSG00000061136	ProperStrand	129	chr14	31827477	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-5.4390
chr11	72203976	72204020	protein_coding	Smtnl2	utr3	ENSMUSG00000045667	ProperStrand	30	chr18	33954843	33954904	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-4.8204
chr11	68886928	68887018	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	chr1	39605589	39605681	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	8	-4.1584
chr2	125082636	125082839	protein_coding	Dut	exon	ENSMUSG00000027203	ProperStrand	18	chr6	125136375	125136400	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	2	-14.1228
chr7	107117305	107117385	protein_coding	Rnf169	intron	ENSMUSG00000058761	ProperStrand	31	chr2	26493374	26493464	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-5.0039
chr15	79250351	79251096	protein_coding	Csnk1e	exon	ENSMUSG00000022433	ProperStrand	59	chr9	122965553	122965570	protein_coding	Tgm4	exon	ENSMUSG00000025787	NonProperStrand	11	1	-16.7218
chr1	136502339	136502439	protein_coding	Kdm5b	utr5	ENSMUSG00000042207	ProperStrand	223	chr10	90581034	90581054	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-2.4066
chr4	43506754	43506772	protein_coding-noncoding	Ccdc107	utr5	ENSMUSG00000028461	ProperStrand	106	chr1	88248601	88248662	snoRNA	ENSMUSG00000064696_SNORD20	.	ENSMUSG00000064696	ProperStrand	89	1	-11.3776
chr2	163879733	163879749	protein_coding	Tomm34	utr3	ENSMUSG00000018322	NonProperStrand	18	chr11	106362617	106362634	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-9.8361
chr8	87571351	87571535	protein_coding	Tnpo2	exon	ENSMUSG00000031691	ProperStrand	92	chr1	192712615	192712631	protein_coding	Rps6kc1	exon	ENSMUSG00000089872	ProperStrand	241	1	-9.6674
chr16	84720552	84724152	protein_coding	Mrpl39	exon	ENSMUSG00000022889	ProperStrand	32	chr18	35714168	35714258	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.6297
chr12	111929774	111929850	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr9	21776096	21776196	protein_coding	Rgl3	utr3	ENSMUSG00000040146	ProperStrand	12	1	-11.5362
chr13	65552012	65552030	lincRNA	Gm7782	intron	ENSMUSG00000090514	NonProperStrand	2	chr12	85350481	85350499	protein_coding	Acot1	utr5	ENSMUSG00000072949	ProperStrand	72	1	-20.8599
chr11	62416970	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	10	-5.4802
chr9	119021246	119021262	protein_coding	Dlec1	exon	ENSMUSG00000038060	ProperStrand	17	chr1	20552542	20552558	protein_coding	Pkhd1	exon	ENSMUSG00000043760	NonProperStrand	49	1	-16.3519
chr8	73115775	73115791	protein_coding	Ell	utr3	ENSMUSG00000070002	NonProperStrand	134	chr11	106362304	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-4.2902
chr7	125329574	125329664	protein_coding	Smg1	exon	ENSMUSG00000030655	ProperStrand	70	chr11	54326933	54326958	protein_coding	Fnip1	exon	ENSMUSG00000035992	ProperStrand	16	1	-15.6933
chr11	70050413	70050457	protein_coding	0610010K14Rik	exon	ENSMUSG00000020831	ProperStrand	16	chr17	35646457	35646477	protein_coding	Pou5f1	exon	ENSMUSG00000024406	ProperStrand	104	1	-14.9113
chr12	86473788	86473806	protein_coding	Dlst	utr3	ENSMUSG00000004789	ProperStrand	52	chr4	131865896	131865986	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-5.5248
chr1	155096836	155109531	protein_coding	Lamc1	exon	ENSMUSG00000026478	ProperStrand	239	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-2.0893
chr10	82113849	82113865	protein_coding	Glt8d2	utr3	ENSMUSG00000020251	NonProperStrand	24	chr4	131825994	131826052	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	3	-inf
chr8	122129036	122129052	protein_coding	Taf1c	utr5	ENSMUSG00000031832	ProperStrand	26	chr18	80403573	80403589	protein_coding	Txnl4a	utr5	ENSMUSG00000057130	ProperStrand	44	1	-15.6320
chr4	117317845	117317935	protein_coding	Eri3	intron	ENSMUSG00000033423	ProperStrand	246	chr14	76247081	76247097	protein_coding	Tpt1	exon	ENSMUSG00000060126	ProperStrand	236	1	-7.7475
chr2	157001158	157001248	protein_coding-noncoding	Rbl1	utr3	ENSMUSG00000027641	NonProperStrand	1	chr2	157001304	157001394	protein_coding	Rbl1	exon	ENSMUSG00000027641	NonProperStrand	7	1	-inf
chr15	82980103	82980227	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr7	29136525	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	12	-1.0554
chr9	53654455	53654545	protein_coding	Slc35f2	exon	ENSMUSG00000042195	ProperStrand	65	chr4	131865460	131865495	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-3.8521
chr14	75730006	75730023	protein_coding	Zc3h13	exon	ENSMUSG00000022000	ProperStrand	42	chr2	22444485	22444522	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-8.4912
chr18	34880002	34880019	protein_coding	Gfra3	utr5	ENSMUSG00000024366	ProperStrand	41	chr17	35089181	35089228	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-6.2347
chr5	110556815	110556835	protein_coding	Zfp605	exon	ENSMUSG00000023284	ProperStrand	1	chr2	126968271	126968288	protein_coding	Itpripl1	utr5	ENSMUSG00000074825	ProperStrand	22	1	-inf
chr19	59064715	59064732	protein_coding	4930506M07Rik	exon	ENSMUSG00000041362	ProperStrand	36	chr10	110918638	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-4.4089
chr6	113786613	113786640	protein_coding	Atp2b2	intron	ENSMUSG00000030302	ProperStrand	14	chr9	120039533	120039574	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-6.1360
chr19	10057202	10057308	protein_coding	Fth1	utr5	ENSMUSG00000024661	ProperStrand	75	chr8	125418802	125418818	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	1	-9.1683
chr3	96218359	96218462	misc_RNA	Telomerase-vert	.	ENSMUSG00000064796	ProperStrand	443	chr17	28454148	28454454	protein_coding	Fance	utr5	ENSMUSG00000007570	ProperStrand	23	1	-11.2495
chr1	136457091	136481732	protein_coding	Kdm5b	utr5	ENSMUSG00000042207	ProperStrand	223	chr19	8800375	8800465	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-1.3481
chr15	11326971	11329275	protein_coding	Tars	exon	ENSMUSG00000022241	ProperStrand	121	chr7	29136544	29136634	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.2799
chr15	79913289	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr8	73121837	73121855	protein_coding	Ssbp4	intron	ENSMUSG00000070003	NonProperStrand	8	1	-7.5918
chr6	87930831	87930911	protein_coding	H1fx	exon	ENSMUSG00000044927	ProperStrand	13	chr9	120039567	120039657	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-6.2868
chr8	113560882	113570699	protein_coding	Aars	intron	ENSMUSG00000031960	ProperStrand	355	chrX	34622906	34623037	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-1.2019
chr11	83254019	83254035	protein_coding	1700020L24Rik	exon	ENSMUSG00000035085	NonProperStrand	88	chr9	58095087	58095187	protein_coding	Pml	exon	ENSMUSG00000036986	ProperStrand	45	1	-13.1240
chr13	56962398	56962414	protein_coding	Trpc7	exon	ENSMUSG00000021541	ProperStrand	50	chr5	90658008	90658100	protein_coding	Ankrd17	utr3	ENSMUSG00000055204	ProperStrand	77	1	-13.1799
chr9	78023109	78023204	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr6	124882546	124882827	protein_coding	Mlf2	exon	ENSMUSG00000030120	ProperStrand	80	3	-12.4190
chr4	147937999	147938017	protein_coding	Exosc10	exon	ENSMUSG00000017264	ProperStrand	20	chr6	142439080	142439096	protein_coding	Ldhb	exon	ENSMUSG00000030246	NonProperStrand	63	1	-15.4597
chr5	124196120	124196171	protein_coding	Rsrc2	intron	ENSMUSG00000029422	ProperStrand	17	chr7	118219575	118219592	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-6.6474
chr4	153353160	153355293	protein_coding	BC046331	exon	ENSMUSG00000039523	ProperStrand	6	chr9	64023237	64023329	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	1	-13.2018
chr7	26559612	26559628	protein_coding	Axl	exon	ENSMUSG00000002602	NonProperStrand	47	chr13	58229501	58229549	protein_coding	Hnrnpa0	exon	ENSMUSG00000007836	ProperStrand	110	1	-12.5898
chr3	85943075	85943135	protein_coding	Rps3a	exon	ENSMUSG00000028081	ProperStrand	177	chr11	77994800	77994833	snoRNA	ENSMUSG00000064540_Snord42a	.	ENSMUSG00000064540	ProperStrand	142	1	-9.4152
chr6	112689098	112689322	protein_coding	Srgap3	exon	ENSMUSG00000030257	NonProperStrand	208	chr7	116663691	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-0.7191
chr5	64669171	64673150	protein_coding	Tbc1d1	exon	ENSMUSG00000029174	ProperStrand	44	chr16	23111393	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-4.9105
chr17	13112435	13112525	protein_coding-noncoding	Tcp1	utr5	ENSMUSG00000068039	ProperStrand	9	chr3	123210853	123210933	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.6210
chr8	10939234	10939324	LTR	MTD	MaLR	chr8MTD10939236	NonProperStrand	1	chr8	81950950	81951030	LTR	ORR1A4	MaLR	chr8ORR1A481950880	ProperStrand	1	1	-inf
chr7	134487745	134487761	protein_coding	Zfp768	utr3	ENSMUSG00000047371	ProperStrand	4	chr5	93612304	93612359	protein_coding	Ccni	exon	ENSMUSG00000063015	ProperStrand	43	4	-inf
chr4	120594565	120594674	protein_coding	Dem1	exon	ENSMUSG00000028629	ProperStrand	3	chr12	70269859	70269879	protein_coding	Lrr1	exon	ENSMUSG00000034883	ProperStrand	26	1	-20.0435
chr8	64501307	64501323	protein_coding	Ddx60	intron	ENSMUSG00000037921	NonProperStrand	1	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-inf
chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	chr1	162968442	162968510	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-1.4648
chrX	83437679	83437722	protein_coding	Nr0b1	exon	ENSMUSG00000025056	ProperStrand	37	chr6	87769189	87769558	protein_coding	Isy1	exon	ENSMUSG00000030056	ProperStrand	172	1	-12.1757
chr2	179322381	179322401	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr4	11473376	11473392	protein_coding	1110037F02Rik	exon	ENSMUSG00000040720	ProperStrand	32	1	-12.4817
chr6	51416585	51416601	protein_coding	Hnrnpa2b1	exon	ENSMUSG00000004980	ProperStrand	166	chr12	17552948	17553032	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-3.1776
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr4	108278918	108278934	protein_coding	Orc1	exon	ENSMUSG00000028587	ProperStrand	161	1	-6.9385
chr4	41142201	41142229	protein_coding	Ubap2	exon	ENSMUSG00000028433	ProperStrand	292	chr16	23109028	23109090	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-4.2002
chr14	66594503	66594593	protein_coding	Clu	exon	ENSMUSG00000022037	ProperStrand	9	chr5	121655017	121655097	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-7.5103
chr2	130462002	130462030	protein_coding	Prosapip1	exon	ENSMUSG00000037703	ProperStrand	11	chr9	15119722	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.8656
chr12	81297913	81299969	protein_coding	Actn1	exon	ENSMUSG00000015143	ProperStrand	128	chr17	24857796	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	4	-5.1046
chr12	88778630	88778721	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	chr19	8800357	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	39	-inf
chr11	58768982	58769038	protein_coding	Hist3h2a	utr3	ENSMUSG00000078851	ProperStrand	67	chr11	69481333	69481433	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.0022
chr14	66016879	66016969	protein_coding	Zfp395	utr3	ENSMUSG00000034522	ProperStrand	15	chr19	8800373	8800453	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-6.2234
chr4	5690428	5690446	protein_coding	Fam110b	intron	ENSMUSG00000049119	NonProperStrand	15	chr4	131865866	131865914	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.2332
chr6	113228086	113228142	protein_coding	Mtmr14	intron	ENSMUSG00000030269	ProperStrand	15	chr5	74489646	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-6.4878
chr3	94875870	94875955	protein_coding	Pip5k1a	exon	ENSMUSG00000028126	ProperStrand	47	chr11	95171392	95171482	protein_coding	Myst2	utr5	ENSMUSG00000038909	ProperStrand	56	1	-13.9479
chr2	179594178	179594278	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr15	34370545	34370615	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-1.7544
chr8	88072549	88072796	protein_coding	Dnaja2	exon	ENSMUSG00000031701	ProperStrand	39	chr17	25968074	25968254	protein_coding	Stub1	exon	ENSMUSG00000039615	ProperStrand	24	5	-19.0965
chr6	54379743	54379760	lincRNA	9130019P16Rik	exon	ENSMUSG00000073067	ProperStrand	255	chr4	148960608	148960670	protein_coding	Clstn1	utr5	ENSMUSG00000039953	ProperStrand	173	1	-8.2935
chr9	64024466	64024527	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	chr19	8963032	8963048	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-5.2567
chr2	79132657	79132674	protein_coding-noncoding	Itga4	utr5	ENSMUSG00000027009	NonProperStrand	118	chr2	144091716	144091816	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	ProperStrand	549	1	-7.5325
chr1	26755646	26755736	DNA	MER82	MER2_type	chr1MER8226755610	ProperStrand	1	chr1	26755016	26755096	LINE	L1_Mus4	L1	chr1L1_Mus426754784	ProperStrand	1	1	-inf
chr3	100246102	100246120	LTR	RLTRETN_Mm	ERVK	chr3RLTRETN_Mm100246025	NonProperStrand	1	chr11	51414933	51414960	protein_coding	Hnrnpab	exon	ENSMUSG00000020358	ProperStrand	124	1	-inf
chr8	126359136	126359152	protein_coding	Rab4a	utr3	ENSMUSG00000019478	ProperStrand	9	chr4	131865886	131865986	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-17.1106
chr9	21548752	21548768	protein_coding	Ldlr	exon	ENSMUSG00000032193	NonProperStrand	39	chr16	23110455	23110507	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.2225
chrX	71517821	71517905	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	chr5	147646751	147646841	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	1	-1.6515
chr11	110270218	110270298	protein_coding	Map2k6	intron	ENSMUSG00000020623	NonProperStrand	2	chr10	120373567	120373657	protein_coding	Lemd3	intron	ENSMUSG00000048661	NonProperStrand	3	1	-inf
chr2	123936884	123936902	protein_coding	Sema6d	intron	ENSMUSG00000027200	NonProperStrand	18	chr19	8798740	8798759	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-7.1868
chr16	17257798	17257814	lincRNA	Gm17625	exon	ENSMUSG00000091106	ProperStrand	8	chr10	23505260	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.7871
chr11	30004459	30004559	protein_coding	Spnb2	exon	ENSMUSG00000020315	ProperStrand	103	chr16	23111770	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-3.4906
chr6	140572337	140572387	protein_coding	Aebp2	exon	ENSMUSG00000030232	ProperStrand	34	chr9	15119714	15119759	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	4	-12.2134
chr8	109398015	109398032	protein_coding	Has3	exon	ENSMUSG00000031910	ProperStrand	1	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-inf
chr11	30765560	30774168	protein_coding	Psme4	exon	ENSMUSG00000040850	ProperStrand	40	chr6	124665382	124665472	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	1	-7.7434
chr4	118806053	118806135	protein_coding	Slc2a1	exon	ENSMUSG00000028645	ProperStrand	361	chr14	112074598	112074615	protein_coding	Slitrk5	utr5	ENSMUSG00000033214	ProperStrand	2	1	-17.3286
chr10	4741155	4741171	protein_coding	Myct1	utr3	ENSMUSG00000046916	ProperStrand	42	chr19	8800406	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-4.1983
chr17	79250762	79250797	pseudogene	Gm6548	.	ENSMUSG00000091549	NonProperStrand	2	chr2	130101985	130102075	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	NonProperStrand	12	2	-inf
chr9	78023112	78023144	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr6	125115312	125115581	protein_coding	Gapdh	utr5	ENSMUSG00000057666	ProperStrand	356	1	-2.5514
chr9	7953029	7953065	protein_coding	Yap1	exon	ENSMUSG00000053110	ProperStrand	68	chr18	33954847	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-3.2766
chr5	144062923	144063023	protein_coding	E130309D02Rik	utr3	ENSMUSG00000039244	ProperStrand	12	chr16	23109053	23109090	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-10.5507
chr18	37911790	37911806	protein_coding	Pcdhga9	intron	ENSMUSG00000023036	ProperStrand	245	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-7.6176
chr2	32154604	32154782	protein_coding	Golga2	exon	ENSMUSG00000002546	ProperStrand	10	chr11	116938694	116938751	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-9.7942
chr9	21229636	21229674	protein_coding	Dnm2	exon	ENSMUSG00000033335	ProperStrand	48	chr7	117189861	117189932	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	4	-18.3838
chr19	6245511	6245550	protein_coding	Atg2a	exon	ENSMUSG00000024773	ProperStrand	97	chr7	106105760	106105776	protein_coding	Uvrag	intron	ENSMUSG00000035354	ProperStrand	13	1	-15.4581
chr13	96100558	96100638	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	chr13	90238630	90238720	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	4	-11.7213
chr9	53328253	53330193	protein_coding	Atm	exon	ENSMUSG00000034218	ProperStrand	17	chr4	149613598	149615166	protein_coding	Eno1	exon	ENSMUSG00000063524	ProperStrand	432	1	-11.9199
chr1	48548129	48548209	LINE	L1_Mus4	L1	chr1L1_Mus448548016	NonProperStrand	1	chr4	71657681	71657771	lincRNA	Gm11234	intron	ENSMUSG00000086696	ProperStrand	2	1	-inf
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr12	88488443	88496424	protein_coding	Pomt2	exon	ENSMUSG00000034126	NonProperStrand	331	1	-2.6994
chr2	71695156	71695208	protein_coding-noncoding	Itga6	utr5	ENSMUSG00000027111	ProperStrand	8	chr17	35089184	35089221	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-9.5771
chr13	25148003	25148019	protein_coding	Dcdc2a	utr5	ENSMUSG00000035910	NonProperStrand	9	chrX	34622906	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-6.8852
chr13	9833566	9833674	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr4	132394295	132394395	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	2	-2.5165
chr8	127973820	127973875	protein_coding	Sipa1l2	exon	ENSMUSG00000001995	ProperStrand	37	chr9	104149152	104165084	protein_coding	Dnajc13	utr5	ENSMUSG00000032560	ProperStrand	60	3	-20.2261
chr13	23666333	23666446	protein_coding	Hist1h2ad	utr5	ENSMUSG00000071478	ProperStrand	4	chr1	162966024	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-9.1328
chr18	63908609	63908625	protein_coding	Wdr7	intron	ENSMUSG00000040560	NonProperStrand	180	chr5	108336363	108336380	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-2.8415
chr1	89638609	89638705	LTR	ORR1A3-int	MaLR	chr1ORR1A3-int89638620	ProperStrand	1	chr1	88252836	88252898	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-inf
chr9	21817149	21817282	protein_coding	Prkcsh	exon	ENSMUSG00000003402	ProperStrand	58	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	2	-12.4644
chr12	17553062	17553092	protein_coding	Odc1	intron	ENSMUSG00000011179	ProperStrand	173	chr7	117190015	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	4	-6.3207
chr13	21281971	21283939	protein_coding	Trim27	exon	ENSMUSG00000021326	ProperStrand	28	chr11	116938559	116938639	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-7.6793
chr12	106269284	106269384	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	chr14	63287574	63287611	snoRNA	ENSMUSG00000089531_SNORA73	.	ENSMUSG00000089531	ProperStrand	123	1	-2.8267
chr11	97372833	97372849	protein_coding	Srcin1	utr3	ENSMUSG00000038453	NonProperStrand	21	chr16	23111388	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-7.7125
chr14	124353869	124353886	protein_coding	Itgbl1	exon	ENSMUSG00000032925	ProperStrand	159	chr14	35561041	35561082	protein_coding	Wapal	utr3	ENSMUSG00000041408	ProperStrand	93	1	-10.4770
chr15	11669669	11669687	SINE	B4A	B4	chr15B4A11669532	NonProperStrand	1	chr4	131908727	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-inf
chr8	72446358	72446450	protein_coding	Gatad2a	intron	ENSMUSG00000036180	ProperStrand	112	chr2	91436311	91436336	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	5	-inf
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr9	78328152	78328212	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-0.8717
chr7	132806491	132806581	protein_coding	Gtf3c1	exon	ENSMUSG00000032777	ProperStrand	161	chr10	90581115	90581195	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-2.9705
chr2	4974190	4974207	protein_coding	Optn	exon	ENSMUSG00000026672	ProperStrand	451	chr7	13516165	13516203	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	2	-7.7708
chr5	22992214	22998171	protein_coding	Mll5	exon	ENSMUSG00000029004	ProperStrand	21	chr8	129468753	129468833	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-6.4742
chr19	6376157	6376221	protein_coding	Sf1	utr3	ENSMUSG00000024949	ProperStrand	251	chr10	6063958	6063978	protein_coding	Akap12	intron	ENSMUSG00000038587	ProperStrand	1008	2	-8.0262
chr4	41673405	41673421	protein_coding	Il11ra1	intron	ENSMUSG00000073889	ProperStrand	128	chr15	79908929	79908957	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-4.0194
chr18	20995496	20995586	protein_coding	Trappc8	exon	ENSMUSG00000033382	ProperStrand	43	chr16	23111735	23111815	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.4531
chr11	45723144	45723160	protein_coding	Clint1	utr3	ENSMUSG00000006169	NonProperStrand	273	chr11	62416578	62416605	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-2.3804
chr6	129628834	129628851	protein_coding	Klrc1	exon	ENSMUSG00000030167	NonProperStrand	49	chr10	75322913	75322972	protein_coding	Mif	utr5	ENSMUSG00000033307	ProperStrand	146	1	-11.9370
chr17	39979942	39980076	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr7	150717298	150717425	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	2	-1.1480
chr8	109899686	109899776	protein_coding	Nfat5	utr3	ENSMUSG00000003847	ProperStrand	29	chr7	118906362	118906452	protein_coding	Galntl4	intron	ENSMUSG00000038296	NonProperStrand	7	1	-19.6087
chr8	77639819	77639863	protein_coding	Mcm5	exon	ENSMUSG00000005410	ProperStrand	199	chr13	58229160	58229274	protein_coding	Hnrnpa0	exon	ENSMUSG00000007836	ProperStrand	110	1	-9.6919
chr5	67563575	67563592	LINE	Lx8	L1	chr5Lx867563502	NonProperStrand	3	chr17	35384119	35384171	snoRNA	ENSMUSG00000065273_SNORD83	.	ENSMUSG00000065273	ProperStrand	244	1	-16.9529
chr13	55426381	55426434	protein_coding	Prelid1	utr3	ENSMUSG00000021486	ProperStrand	19	chr2	26494712	26494802	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.2936
chr11	83316341	83317934	protein_coding	Taf15	exon	ENSMUSG00000020680	ProperStrand	60	chr19	46454745	46454789	protein_coding	Actr1a	exon	ENSMUSG00000025228	ProperStrand	27	1	-14.9329
chrX	131339427	131339470	protein_coding	Armcx2	exon	ENSMUSG00000033436	ProperStrand	12	chr17	78892338	78892429	protein_coding	Gm10093	utr3	ENSMUSG00000061062	ProperStrand	2	1	-inf
chr17	35822057	35822256	protein_coding	Ddr1	exon	ENSMUSG00000003534	ProperStrand	129	chr12	4840463	4840563	protein_coding	Fkbp1b	utr3	ENSMUSG00000020635	ProperStrand	4	4	-inf
chr11	120429238	120429270	protein_coding	P4hb	exon	ENSMUSG00000025130	ProperStrand	83	chr4	131865414	131865506	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	2	-5.8005
chr9	64324488	64324505	protein_coding	Megf11	intron	ENSMUSG00000036466	ProperStrand	15	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.9503
chr2	109880743	109880843	protein_coding	Ccdc34	exon	ENSMUSG00000027160	ProperStrand	4	chr19	8963027	8963081	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-7.6308
chr12	55797769	55797859	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	chr2	158185589	158185655	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-1.4142
chr4	124529003	124529020	protein_coding	Yrdc	exon	ENSMUSG00000028889	ProperStrand	13	chr19	4324448	4324468	protein_coding	Kdm2a	exon	ENSMUSG00000054611	ProperStrand	71	1	-16.0852
chr7	101930264	101930281	SINE	B3A	B2	chr7B3A101930222	ProperStrand	3	chr4	131865435	131865463	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-10.2531
chr12	86640924	86641024	protein_coding	Nek9	utr3	ENSMUSG00000034290	ProperStrand	50	chr18	75161534	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-7.5667
chr1	55135149	55135174	protein_coding	Hspd1	exon	ENSMUSG00000025980	ProperStrand	140	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-7.2892
chr13	59684043	59684060	protein_coding-noncoding	Agtpbp1	utr3	ENSMUSG00000021557	NonProperStrand	2	chr4	131908356	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-8.3123
chr10	46753273	46753353	LINE	Lx7	L1	chr10Lx746753035	NonProperStrand	1	chrX	76750982	76751072	protein_coding	Gm7173	intron	ENSMUSG00000073077	ProperStrand	1	1	-inf
chr4	126872060	126872077	protein_coding	Dlgap3	exon	ENSMUSG00000042388	NonProperStrand	4	chr16	23110914	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-8.2228
chr14	76926611	76926627	LINE	L1MB3	L1	chr14L1MB376926376	ProperStrand	61	chr9	15118245	15118321	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.4363
chr19	8358771	8358861	LINE	L1_Mm	L1	chr19L1_Mm8358197	NonProperStrand	1	chr7	54442956	54443036	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	1	-inf
chr7	30978910	30978969	protein_coding	Capns1	exon	ENSMUSG00000001794	ProperStrand	35	chr7	57015036	57015054	protein_coding	Htatip2	exon	ENSMUSG00000039745	ProperStrand	5	1	-18.8685
chr14	56389353	56390228	protein_coding	Adcy4	exon	ENSMUSG00000022220	ProperStrand	29	chr13	17835845	17835865	protein_coding	Cdk13	intron	ENSMUSG00000041297	ProperStrand	29	1	-16.2832
chr17	83847592	83850004	protein_coding	Eml4	exon	ENSMUSG00000032624	ProperStrand	50	chr9	120038003	120038052	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	2	-8.3406
chr14	118995947	118996727	protein_coding	Abcc4	exon	ENSMUSG00000032849	ProperStrand	137	chr4	53873613	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	2	-11.8530
chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	chr17	35089181	35089227	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-1.0062
chr5	31361472	31361872	protein_coding	Cad	exon	ENSMUSG00000013629	ProperStrand	260	chr10	110918558	110918638	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-1.0818
chr7	87608698	87608806	protein_coding	Blm	exon	ENSMUSG00000030528	ProperStrand	35	chr2	161080992	161081033	pseudogene	Gm5270	.	ENSMUSG00000081099	ProperStrand	1	1	-inf
chr11	99885311	99885327	protein_coding	Krt33b	exon	ENSMUSG00000057723	NonProperStrand	352	chr17	35299521	35299642	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	2	-3.0465
chrX	39606907	39606923	protein_coding	Stag2	exon	ENSMUSG00000025862	ProperStrand	10	chr7	16963779	16963803	protein_coding	Sae1	exon	ENSMUSG00000052833	ProperStrand	29	1	-19.3025
chr11	6428044	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr14	31827477	31827548	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	11	-2.3403
chr14	66382814	66382832	protein_coding	Scara5	utr3	ENSMUSG00000022032	NonProperStrand	5	chr10	82112371	82112471	protein_coding	Tdg	utr3	ENSMUSG00000034674	ProperStrand	42	1	-18.2513
chr19	4897632	4897648	protein_coding	Bbs1	exon	ENSMUSG00000006464	NonProperStrand	4	chr4	131908807	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-16.0559
chr14	65639277	65639310	protein_coding	Ints9	exon	ENSMUSG00000021975	ProperStrand	10	chr19	8800084	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	2	-17.6410
chr10	42255064	42255115	protein_coding	Snx3	utr3	ENSMUSG00000019804	ProperStrand	19	chr5	121654970	121654998	protein_coding	Rpl6	intron	ENSMUSG00000029614	ProperStrand	332	1	-12.2179
chr14	18361438	18361518	LINE	L1_Mus1	L1	chr14L1_Mus118360674	ProperStrand	1	chrX	41161422	41161512	LINE	L1_Mus3	L1	chrXL1_Mus341160782	ProperStrand	1	1	-inf
chr1	170530422	170530440	LTR	LTR16E2	ERVL	chr1LTR16E2170530317	ProperStrand	2	chr4	131865394	131865503	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-11.3495
chr7	29171540	29171558	protein_coding	Med29	utr3	ENSMUSG00000003444	NonProperStrand	134	chr7	117189946	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	6	-12.1262
chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	chr8	32260335	32260425	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-1.5278
chr19	17295810	17295895	protein_coding	Prune2	utr3	ENSMUSG00000039126	ProperStrand	49	chr5	108334193	108334283	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	12	-inf
chr5	114227956	114228011	protein_coding	Iscu	utr3	ENSMUSG00000025825	ProperStrand	15	chr9	120039532	120039622	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	5	-inf
chr10	80620084	80620100	protein_coding	Pias4	exon	ENSMUSG00000004934	NonProperStrand	3	chr1	162967505	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-9.6828
chr10	62342377	62342457	protein_coding	Tet1	exon	ENSMUSG00000047146	ProperStrand	286	chr2	130101996	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-2.4679
chr14	15572351	15572370	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr19	8798760	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	2	-5.0534
chr4	140563152	140563196	protein_coding	Atp13a2	utr3	ENSMUSG00000036622	ProperStrand	39	chr7	38354919	38354935	protein_coding	Zfp536	exon	ENSMUSG00000043456	NonProperStrand	236	1	-11.4356
chr11	100414998	100415014	protein_coding	Ttc25	exon	ENSMUSG00000006784	NonProperStrand	119	chr1	162965979	162965998	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-2.3876
chr1	133141328	133141345	protein_coding	Rassf5	exon	ENSMUSG00000026430	ProperStrand	73	chr5	115597212	115597229	protein_coding	Mlec	utr3	ENSMUSG00000048578	NonProperStrand	25	1	-14.6920
chr1	137164714	137164743	protein_coding	Rnpep	exon	ENSMUSG00000041926	ProperStrand	2	chr17	35087895	35087932	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-12.6096
chr16	55904822	55904838	protein_coding	Cep97	utr3	ENSMUSG00000022604	ProperStrand	22	chr19	8799034	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-7.8356
chr7	36388906	36389233	protein_coding	Ankrd27	exon	ENSMUSG00000034867	ProperStrand	132	chr11	62417004	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-4.5133
chr15	103180672	103180689	protein_coding	Itga5	exon	ENSMUSG00000000555	NonProperStrand	8	chr2	157135992	157138276	protein_coding	Rpn2	exon	ENSMUSG00000027642	ProperStrand	363	1	-13.8437
chr14	31372958	31373005	protein_coding	Tkt	exon	ENSMUSG00000021957	ProperStrand	160	chr18	33954918	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-1.8205
chr10	75866560	75867207	protein_coding	Pcnt	exon	ENSMUSG00000001151	ProperStrand	127	chr1	161270527	161270555	snoRNA	ENSMUSG00000089536_Scarna3a	.	ENSMUSG00000089536	ProperStrand	247	1	-8.9733
chr7	96888454	96934941	protein_coding	Me3	exon	ENSMUSG00000030621	NonProperStrand	8	chr7	148634702	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-8.0136
chr15	48623472	48623492	protein_coding	Csmd3	utr5	ENSMUSG00000022311	ProperStrand	23	chr2	26494708	26494807	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.9167
chr2	31830065	31832026	protein_coding	Nup214	utr5	ENSMUSG00000001855	ProperStrand	62	chr8	32260335	32260385	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	5	-18.2579
chr6	125057553	125057630	protein_coding	Chd4	exon	ENSMUSG00000063870	ProperStrand	303	chr8	73419685	73419775	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-0.6951
chr4	116665518	116665591	protein_coding	Urod	exon	ENSMUSG00000028684	ProperStrand	14	chr13	49779680	49779780	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-9.9592
chr19	3851699	3851715	processed_transcript	Gm16066	.	ENSMUSG00000082848	NonProperStrand	11	chr3	123210919	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.2109
chr16	57153509	57153533	protein_coding	Tomm70a	utr3	ENSMUSG00000022752	ProperStrand	82	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.9981
chr2	80647737	80647827	LINE	L1Md_A	L1	chr2L1Md_A80646028	ProperStrand	8	chrX	159209089	159210203	protein_coding	Rbbp7	exon	ENSMUSG00000031353	ProperStrand	48	8	-inf
chr16	32098851	32098901	protein_coding	Pigx	intron	ENSMUSG00000023791	ProperStrand	3	chr3	68889026	68889126	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	3	-inf
chrX	132424340	132424385	protein_coding	Bhlhb9	exon	ENSMUSG00000072964	ProperStrand	11	chr5	130300420	130300510	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-5.7288
chr3	88549785	88549841	protein_coding	Syt11	utr3	ENSMUSG00000068923	ProperStrand	7	chr7	116663653	116663743	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-6.6732
chr14	51427237	51427312	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr11	3139446	3139469	protein_coding	Eif4enif1	exon	ENSMUSG00000020454	ProperStrand	575	1	-2.8948
chr18	73693115	73693151	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr15	5068412	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	8	-4.5794
chr4	117908596	117908686	protein_coding	Ptprf	exon	ENSMUSG00000033295	ProperStrand	337	chr5	121655063	121655143	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-0.9604
chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	chr19	8798484	8798550	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-3.2561
chr6	146994645	146996730	protein_coding	Mrps35	exon	ENSMUSG00000040112	ProperStrand	15	chr1	88247835	88247875	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	3	-17.8178
chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	1	-6.9547
chr5	130555368	130555388	protein_coding	Tpst1	utr5	ENSMUSG00000034118	ProperStrand	22	chr10	23505152	23505266	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-7.4556
chr9	103103636	103103702	protein_coding	Gm20425	exon	ENSMUSG00000090639	ProperStrand	22	chr9	15119649	15119749	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.4840
chr3	51081710	51081726	antisense	4930577N17Rik	.	ENSMUSG00000087440	ProperStrand	2	chr1	88252835	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-14.0852
chr11	62416951	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	chr10	110918547	110918693	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	20	-5.7069
chr10	17443077	17443096	protein_coding	Cited2	utr5	ENSMUSG00000039910	ProperStrand	64	chr19	8800371	8800471	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-3.4114
chr3	89354340	89354357	protein_coding	Kcnn3	intron	ENSMUSG00000000794	NonProperStrand	38	chr19	6994625	6994680	protein_coding	Esrra	exon	ENSMUSG00000024955	ProperStrand	6	1	-18.4297
chr14	31952028	31952081	protein_coding	Nt5dc2	exon	ENSMUSG00000071547	ProperStrand	22	chr3	153573527	153573557	snoRNA	ENSMUSG00000064731_Snord45b	.	ENSMUSG00000064731	ProperStrand	205	1	-12.8834
chr1	95717752	95717806	protein_coding	Ing5	utr3	ENSMUSG00000026283	ProperStrand	16	chr14	70539357	70539457	protein_coding	2610301G19Rik	exon	ENSMUSG00000033712	ProperStrand	49	1	-16.4619
chr3	116126898	116126914	protein_coding	Cdc14a	utr5	ENSMUSG00000033502	ProperStrand	29	chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	1	-13.1568
chr4	59489729	59489814	protein_coding	Rod1	utr3	ENSMUSG00000028382	ProperStrand	52	chr7	116664819	116664909	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.7980
chr10	34002680	34002698	protein_coding	Tspyl1	exon	ENSMUSG00000047514	ProperStrand	22	chr11	62416951	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-8.0496
chr13	46862891	46862981	snoRNA	ENSMUSG00000064558_SNORA55	.	ENSMUSG00000064558	ProperStrand	187	chr2	158184090	158184170	snoRNA	ENSMUSG00000064995_SNORA71	.	ENSMUSG00000064995	ProperStrand	430	1	-7.1030
chr3	96527940	96527956	protein_coding	Polr3c	exon	ENSMUSG00000028099	NonProperStrand	75	chr2	166888977	166889029	snoRNA	ENSMUSG00000077515_SNORD12	.	ENSMUSG00000077515	ProperStrand	191	1	-10.5419
chr18	63908609	63908625	protein_coding	Wdr7	intron	ENSMUSG00000040560	NonProperStrand	180	chr4	131865855	131865972	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-0.9511
chr3	33715006	33715087	protein_coding	Ccdc39	intron	ENSMUSG00000027676	NonProperStrand	1	chr17	35299508	35299598	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-inf
chrX	72214248	72214264	protein_coding-noncoding	Gab3	utr3	ENSMUSG00000032750	ProperStrand	420	chr9	120037910	120037960	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-1.3399
chr17	25953221	25953239	protein_coding	Fbxl16	intron	ENSMUSG00000025738	ProperStrand	12	chr1	63349508	63349573	protein_coding	Zdbf2	exon	ENSMUSG00000027520	ProperStrand	72	1	-16.2026
chr10	77517793	77519610	protein_coding	Dnmt3l	exon	ENSMUSG00000000730	ProperStrand	37	chr15	34370545	34370627	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-4.4605
chr4	131865966	131866292	lincRNA	Snhg12	exon	ENSMUSG00000086290	ProperStrand	178	chr7	116663711	116663758	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-1.7971
chr1	88247742	88247834	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	chr11	62416951	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	6	-1.8145
chr10	4999647	4999663	protein_coding	Syne1	exon	ENSMUSG00000019769	ProperStrand	49	chr11	69483194	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.8009
chr2	126621070	126622890	protein_coding	Trpm7	exon	ENSMUSG00000027365	ProperStrand	34	chr19	8799601	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-7.9015
chr5	65213415	65213515	protein_coding	Klf3	exon	ENSMUSG00000029178	ProperStrand	56	chr18	35716860	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.2842
chr4	56819129	56819147	protein_coding	BC026590	utr3	ENSMUSG00000038827	NonProperStrand	50	chr6	115758102	115758118	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-5.8295
chr1	72392898	72392914	protein_coding	Xrcc5	exon	ENSMUSG00000026187	ProperStrand	12	chr17	24857720	24857761	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-5.3067
chr11	98876040	98876236	protein_coding	Top2a	exon	ENSMUSG00000020914	ProperStrand	324	chr19	8798743	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-1.7963
chrX	101152850	101152917	protein_coding	Rlim	utr3	ENSMUSG00000056537	ProperStrand	38	chr7	117190000	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.1847
chr17	36405585	36405602	protein_coding	Trim39	utr5	ENSMUSG00000045409	NonProperStrand	8	chr5	121655031	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-7.7589
chr19	7278586	7278608	protein_coding	Otub1	exon	ENSMUSG00000024767	ProperStrand	9	chr16	23110911	23110966	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.9939
chr17	28467546	28467574	protein_coding	Rpl10a	exon	ENSMUSG00000037805	ProperStrand	121	chr4	56910496	56910577	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	3	-11.2361
chr6	39369897	39369977	protein_coding	Mkrn1	exon	ENSMUSG00000029922	ProperStrand	177	chr11	6428076	6428166	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.4118
chr7	133646501	133646538	protein_coding	Atxn2l	exon	ENSMUSG00000032637	ProperStrand	219	chr3	100727317	100728874	protein_coding	Trim45	exon	ENSMUSG00000033233	ProperStrand	59	1	-10.7506
chr10	84388310	84388338	protein_coding	Ric8b	exon	ENSMUSG00000035620	ProperStrand	5	chr4	131908689	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.7672
chr5	136707644	136707661	protein_coding	Sh2b2	exon	ENSMUSG00000005057	NonProperStrand	101	chr7	150717298	150717420	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-4.5005
chr2	180610252	180610270	lincRNA	Gm14342	intron	ENSMUSG00000086166	NonProperStrand	18	chr4	116826710	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-9.2070
chr11	120457379	120459036	protein_coding	Alyref	exon	ENSMUSG00000025134	ProperStrand	53	chr4	131866162	131866242	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-3.8966
chrX	130496426	130496668	protein_coding	Sytl4	exon	ENSMUSG00000031255	ProperStrand	169	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-5.6938
chr14	65372783	65372872	snoRNA	ENSMUSG00000064442_SNORA36	.	ENSMUSG00000064442	ProperStrand	296	chr19	8798740	8798795	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-1.9379
chr16	57391761	57391792	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr17	35089181	35089229	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	2	-1.6561
chr17	17871291	17871382	LINE	L1_Mm	L1	chr17L1_Mm17871191	ProperStrand	1	chr17	17870744	17870824	protein_coding	Vmn2r90	exon	ENSMUSG00000092120	ProperStrand	1	1	-inf
chr13	51743576	51743666	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	chr11	68886932	68887012	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	16	-11.2709
chr17	25968562	25968826	protein_coding	Stub1	exon	ENSMUSG00000039615	ProperStrand	24	chr9	64143802	64143865	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	6	-inf
chr8	46439259	46439275	protein_coding	Fam149a	exon	ENSMUSG00000070044	ProperStrand	57	chr2	130102053	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-5.4567
chr2	153228256	153228277	protein_coding	Asxl1	utr3	ENSMUSG00000042548	ProperStrand	76	chr1	89673731	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	6	-15.7010
chr17	46935999	46936104	protein_coding	BC032203	utr3	ENSMUSG00000036568	ProperStrand	64	chr14	96988128	96988180	snoRNA	ENSMUSG00000064581_SNORA30	.	ENSMUSG00000064581	ProperStrand	146	1	-11.3984
chr1	15801146	15801163	protein_coding	Terf1	intron	ENSMUSG00000025925	ProperStrand	19	chr12	88778719	88778765	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-8.8092
chr9	119456768	119456791	protein_coding	Scn5a	intron	ENSMUSG00000032511	NonProperStrand	6	chr9	120039547	120039612	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	NonProperStrand	24	1	-18.6952
chr9	65177667	65177683	protein_coding	Clpx	exon	ENSMUSG00000015357	ProperStrand	1	chr7	52382237	52382314	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-inf
chr17	28942900	28942990	protein_coding	Brpf3	exon	ENSMUSG00000063952	ProperStrand	32	chr19	8798484	8798546	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-6.4500
chr10	80248306	80248329	protein_coding	Dot1l	exon	ENSMUSG00000061589	ProperStrand	48	chr10	23505152	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.5517
chr10	62424222	62429505	protein_coding	Dna2	exon	ENSMUSG00000036875	ProperStrand	35	chr16	23110937	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.7567
chr6	21590767	21590787	protein_coding	Kcnd2	intron	ENSMUSG00000060882	NonProperStrand	5	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr9	59528125	59528146	protein_coding	Gramd2	intron	ENSMUSG00000074259	NonProperStrand	1	chr5	121655031	121655116	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-inf
chr10	80569464	80569535	protein_coding	Map2k2	intron	ENSMUSG00000035027	ProperStrand	26	chr4	116827121	116827141	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-8.7191
chr12	120440540	120440630	protein_coding-noncoding	Itgb8	utr3	ENSMUSG00000025321	NonProperStrand	1	chr12	120441133	120441223	protein_coding	Itgb8	intron	ENSMUSG00000025321	NonProperStrand	3	1	-inf
chr15	101923452	101923552	protein_coding	Eif4b	exon	ENSMUSG00000058655	ProperStrand	484	chr18	35102297	35102328	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-2.6479
chr5	105869249	105869265	protein_coding	Lrrc8b	intron	ENSMUSG00000070639	NonProperStrand	11	chr1	89681355	89681381	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-8.8598
chr2	90235292	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	116827117	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	8	-4.2447
chr15	101919062	101925417	protein_coding	Eif4b	exon	ENSMUSG00000058655	ProperStrand	484	chr9	120038532	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	4	-1.8723
chr17	31982564	31986567	protein_coding	Sik1	utr3	ENSMUSG00000024042	ProperStrand	55	chr9	15119975	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	2	-11.9115
chr4	64850421	64850438	protein_coding	Pappa	exon	ENSMUSG00000028370	ProperStrand	65	chr3	157653554	157653570	protein_coding	Ankrd13c	intron	ENSMUSG00000039988	NonProperStrand	7	1	-17.6356
chr4	108686293	108733715	protein_coding	Nrd1	exon	ENSMUSG00000053510	ProperStrand	76	chr16	23110913	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-1.5986
chr1	52289961	52290031	protein_coding	Gls	utr5	ENSMUSG00000026103	ProperStrand	56	chr11	87172190	87172206	protein_coding	Ppm1e	exon	ENSMUSG00000046442	ProperStrand	112	1	-12.1993
chr16	90221118	90223058	protein_coding	Sod1	exon	ENSMUSG00000022982	ProperStrand	75	chr7	116664819	116664899	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-3.8929
chr14	121337824	121337892	protein_coding	Ipo5	exon	ENSMUSG00000030662	ProperStrand	135	chr2	26767618	26767923	protein_coding	Rpl7a	exon	ENSMUSG00000062647	ProperStrand	234	1	-8.9591
chr19	5760861	5761697	protein_coding	Scyl1	exon	ENSMUSG00000024941	ProperStrand	59	chr10	110918549	110918639	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-3.4796
chr4	126709083	126709121	protein_coding	Sfpq	intron	ENSMUSG00000028820	ProperStrand	340	chr3	95980307	95980339	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-3.5185
chr15	25733081	25733117	protein_coding	Myo10	exon	ENSMUSG00000022272	ProperStrand	168	chr19	6316368	6316526	protein_coding	Cdc42bpg	exon	ENSMUSG00000024769	ProperStrand	90	2	-16.3885
chr2	109852460	109852560	protein_coding	Lgr4	exon	ENSMUSG00000050199	ProperStrand	27	chr5	108334273	108334332	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	2	-10.3787
chr14	79266335	79266413	protein_coding	1300010F03Rik	intron	ENSMUSG00000058997	ProperStrand	29	chr18	33954817	33954907	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-4.8865
chr6	101587895	101587911	LINE	L1_Mur3	L1	chr6L1_Mur3101586201	NonProperStrand	1	chr7	3603465	3603484	protein_coding	Cnot3	exon	ENSMUSG00000035632	ProperStrand	55	1	-inf
chr16	23113779	23113834	protein_coding	Eif4a2	utr3	ENSMUSG00000022884	ProperStrand	356	chr3	88497884	88497980	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-3.9974
chr5	37710327	37711515	protein_coding	Evc	exon	ENSMUSG00000029122	ProperStrand	14	chr6	55409137	55409154	protein_coding	Adcyap1r1	intron	ENSMUSG00000029778	NonProperStrand	12	1	-22.4876
chr16	92808636	92808654	protein_coding	Runx1	intron	ENSMUSG00000022952	NonProperStrand	17	chr17	35087894	35087955	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	2	-12.4111
chr4	134876919	134876983	protein_coding	Srrm1	utr3	ENSMUSG00000028809	ProperStrand	142	chr11	69483194	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.1323
chr16	91500217	91501889	protein_coding	Ifnar1	exon	ENSMUSG00000022967	ProperStrand	13	chr6	83111671	83111687	protein_coding	1700003E16Rik	exon	ENSMUSG00000030030	ProperStrand	352	1	-12.8849
chr11	69560613	69560717	protein_coding	Polr2a	exon	ENSMUSG00000005198	ProperStrand	200	chr16	23110526	23110557	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	4	-3.7211
chr8	89378562	89378662	protein_coding	N4bp1	intron	ENSMUSG00000031652	ProperStrand	98	chr4	149611410	149611430	protein_coding	Eno1	utr5	ENSMUSG00000063524	ProperStrand	432	1	-8.3779
chr15	98864978	98867495	protein_coding	Tuba1c	exon	ENSMUSG00000043091	ProperStrand	28	chr15	98781322	98781412	protein_coding	Tuba1a	exon	ENSMUSG00000072235	ProperStrand	17	1	-17.3942
chr15	48382885	48382914	snRNA	ENSMUSG00000065742_U2	.	ENSMUSG00000065742	ProperStrand	3	chr5	121655052	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-9.9796
chr19	31005116	31005133	protein_coding	Prkg1	intron	ENSMUSG00000052920	ProperStrand	32	chr1	162965982	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-4.7971
chr14	45949538	45949554	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	chr11	62416575	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-2.0875
chr8	73923525	73923640	protein_coding	5430437P03Rik	exon	ENSMUSG00000031820	ProperStrand	11	chr16	23111708	23111753	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.0138
chr4	135608482	135608524	protein_coding	Rpl11	exon	ENSMUSG00000059291	ProperStrand	152	chr16	23111371	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	8	-6.4590
chr4	106682290	106700814	protein_coding	Ssbp3	exon	ENSMUSG00000061887	ProperStrand	36	chr9	15119725	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.5483
chr9	44142814	44142904	protein_coding	H2afx	utr5	ENSMUSG00000049932	ProperStrand	137	chr15	98350151	98350231	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	8	-21.5047
chr4	46499767	46499784	SINE	ID_B1	B4	chr4ID_B146499735	ProperStrand	33	chr2	79132657	79132674	protein_coding-noncoding	Itga4	utr5	ENSMUSG00000027009	NonProperStrand	118	1	-13.1622
chrX	3161854	3161944	LINE	L1Md_F2	L1	chrXL1Md_F23160820	NonProperStrand	1	chr7	54442281	54442361	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	1	-inf
chr11	120440192	120440215	protein_coding	Arhgdia	utr3	ENSMUSG00000025132	ProperStrand	39	chr3	146637410	146637426	protein_coding	Ttll7	intron	ENSMUSG00000036745	NonProperStrand	16	1	-16.8747
chr4	132530098	132530117	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	chr2	22444850	22444900	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-4.1596
chr7	117166723	117166803	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	chr16	56035871	56035961	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	1	-1.0992
chr11	97028903	97028927	protein_coding	Kpnb1	exon	ENSMUSG00000001440	ProperStrand	197	chr16	23110524	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-1.5375
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr9	79915104	79915120	protein_coding	Senp6	utr5	ENSMUSG00000034252	ProperStrand	110	1	-4.7257
chr13	59877031	59877048	protein_coding	Zcchc6	intron	ENSMUSG00000035248	ProperStrand	23	chr17	24665434	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	2	-11.0604
chr9	15118256	15118312	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	NonProperStrand	11	chr5	74489614	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	NonProperStrand	5	1	-19.4286
chr1	72301657	72301768	snRNA	ENSMUSG00000093333_AC120136.3	.	ENSMUSG00000093333	ProperStrand	68	chr1	89673681	89673716	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-3.0377
chrX	71556355	71556395	protein_coding	Gdi1	utr3	ENSMUSG00000015291	ProperStrand	24	chr7	29136598	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-9.9027
chr2	32434023	32434040	protein_coding	Pip5kl1	exon	ENSMUSG00000046854	NonProperStrand	8	chr2	158182202	158182291	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-9.0791
chr7	108553445	108553545	protein_coding	Arap1	intron	ENSMUSG00000032812	ProperStrand	23	chr15	79913288	79913351	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-5.4333
chr2	57090809	57090826	protein_coding	Gpd2	utr5	ENSMUSG00000026827	ProperStrand	93	chr7	138277354	138277371	protein_coding	Fgfr2	intron	ENSMUSG00000030849	NonProperStrand	95	1	-11.5091
chr19	9042741	9043685	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	chr7	29136529	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-0.7611
chr6	85463497	85463513	protein_coding	Egr4	utr5	ENSMUSG00000071341	NonProperStrand	1	chr17	24343586	24343602	protein_coding	Ntn3	exon	ENSMUSG00000079662	ProperStrand	237	1	-inf
chr12	72062944	72063034	protein_coding	Actr10	exon	ENSMUSG00000021076	ProperStrand	21	chr11	69481354	69481434	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.1963
chr7	29171540	29171558	protein_coding	Med29	utr3	ENSMUSG00000003444	NonProperStrand	134	chr7	116663653	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.2588
chr2	49474897	49474987	protein_coding	Kif5c	utr5	ENSMUSG00000026764	ProperStrand	10	chr19	8800376	8800456	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-7.0560
chr9	40611901	40612001	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr2	166860383	166860425	protein_coding	Ddx27	utr3	ENSMUSG00000017999	ProperStrand	55	1	-8.3132
chr13	95190728	95190749	protein_coding	Ap3b1	intron	ENSMUSG00000021686	ProperStrand	96	chr5	108334195	108336485	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-3.9264
chr4	43505701	43505794	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr19	55289554	55289571	protein_coding	Gucy2g	exon	ENSMUSG00000055523	ProperStrand	6	1	-7.6381
chr11	63885336	63887052	protein_coding	Cox10	exon	ENSMUSG00000042148	NonProperStrand	187	chr11	102966736	102966791	protein_coding	Acbd4	exon	ENSMUSG00000056938	ProperStrand	20	1	-13.2640
chr14	51690417	51690433	protein_coding	Olfr750	exon	ENSMUSG00000035932	NonProperStrand	16	chr4	131865867	131865893	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.1079
chr2	91771603	91771797	protein_coding	Mdk	utr5	ENSMUSG00000027239	ProperStrand	56	chr7	116663693	116663759	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.6307
chr1	87803651	87803671	protein_coding	Itm2c	exon	ENSMUSG00000026223	ProperStrand	21	chr7	52381972	52382013	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-8.8217
chr2	146866596	146866679	protein_coding	Xrn2	exon	ENSMUSG00000027433	ProperStrand	48	chr16	23111705	23111740	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-6.1260
chr1	59540622	59540712	protein_coding	Fzd7	exon	ENSMUSG00000041075	ProperStrand	373	chr5	74489595	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-0.8589
chr13	9833579	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-0.7271
chr11	40515327	40515417	protein_coding	Hmmr	utr3	ENSMUSG00000020330	ProperStrand	61	chr12	111932330	111932410	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	1	-8.2264
chr2	57039072	57039089	lincRNA	4930555B11Rik	intron	ENSMUSG00000086396	NonProperStrand	3	chr1	133252344	133252402	protein_coding	Srgap2	intron	ENSMUSG00000026425	ProperStrand	299	1	-16.4368
chr9	43919625	43919715	protein_coding	Rnf26	utr3	ENSMUSG00000053128	ProperStrand	30	chr11	97642993	97643073	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.7184
chr15	5066658	5067311	protein_coding	Rpl37	utr5	ENSMUSG00000041841	ProperStrand	69	chr1	162965550	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-5.2242
chr15	81480642	81480707	protein_coding	Ep300	exon	ENSMUSG00000055024	ProperStrand	118	chr2	158182156	158182194	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-3.7187
chr11	117011968	117014473	protein_coding	Sec14l1	exon	ENSMUSG00000020823	ProperStrand	71	chr6	97112810	97112886	snoRNA	ENSMUSG00000065728_SNORA36	.	ENSMUSG00000065728	ProperStrand	158	1	-11.0316
chr19	8799521	8799725	lincRNA	Snhg1	exon	ENSMUSG00000090867	ProperStrand	100	chr1	192623720	192623793	protein_coding	Rps6kc1	exon	ENSMUSG00000089872	ProperStrand	241	1	-9.5003
chr5	121658472	121658572	protein_coding	Rpl6	exon	ENSMUSG00000029614	ProperStrand	332	chr5	107065349	107065392	protein_coding	Zfp644	exon	ENSMUSG00000049606	ProperStrand	35	1	-10.9728
chr15	82980098	82980224	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr15	34370544	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	6	-1.0197
chr4	43505804	43505894	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr2	156113640	156113670	protein_coding	Phf20	exon	ENSMUSG00000038116	ProperStrand	60	1	-3.0703
chr17	39979983	39980004	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr19	57435752	57435769	protein_coding	Fam160b1	utr5	ENSMUSG00000033478	ProperStrand	49	1	-7.6273
chr2	90235286	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr12	100626727	100626743	protein_coding	Foxn3	exon	ENSMUSG00000033713	ProperStrand	74	2	-6.8205
chr1	162968442	162968483	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	chr11	106362669	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-0.9437
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr9	72596163	72596270	protein_coding	Nedd4	utr3	ENSMUSG00000032216	ProperStrand	308	1	-3.8598
chr2	146125209	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	chr10	110918549	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	6	-10.4776
chr7	4744994	4745143	protein_coding	Rpl28	exon	ENSMUSG00000030432	ProperStrand	220	chr18	73693166	73693186	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-3.0752
chr12	32004791	32004855	protein_coding	Lamb1	exon	ENSMUSG00000002900	ProperStrand	87	chr7	116663665	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.8983
chr3	88122437	88124440	protein_coding	Cct3	exon	ENSMUSG00000001416	ProperStrand	82	chr16	23111455	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.8604
chr11	77973687	77973787	protein_coding	Traf4	exon	ENSMUSG00000017386	ProperStrand	34	chr1	162965981	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-4.6796
chr4	134896496	134896776	protein_coding	Srrm1	exon	ENSMUSG00000028809	ProperStrand	142	chr17	35088971	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-4.2051
chr8	90654978	90655058	protein_coding	Tmem188	utr3	ENSMUSG00000036810	ProperStrand	14	chr1	162967489	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-6.3039
chr7	116663683	116663767	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	chr3	153574588	153574655	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	3	-1.1071
chr9	120037995	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	chr4	116828402	116828437	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	4	-3.5913
chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-6.7382
chr3	100488624	100488710	protein_coding	Man1a2	exon	ENSMUSG00000008763	ProperStrand	18	chr1	162965987	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-5.9338
chr12	111930636	111934498	protein_coding	Hsp90aa1	utr5	ENSMUSG00000021270	ProperStrand	751	chr8	73419657	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	5	-1.4360
chr7	4436103	4436294	protein_coding	Ppp1r12c	exon	ENSMUSG00000019254	ProperStrand	15	chr19	8963045	8963125	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.8348
chr5	54389949	54389967	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	chr19	4398042	4398059	protein_coding	Kdm2a	utr5	ENSMUSG00000054611	ProperStrand	71	1	-10.4434
chr1	182919791	182919852	protein_coding	Ephx1	utr3	ENSMUSG00000038776	ProperStrand	26	chr3	123210853	123210897	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-8.8817
mmu-miR-294-3p	1	21	miRNA	mmu-miR-294-3p	.	mmu-miR-294-3p	ProperStrand	35	chr3	95634630	95634735	protein_coding	Prpf3	utr3	ENSMUSG00000015748	ProperStrand	29	5	-inf
chr16	91729698	91729723	protein_coding	Itsn1	utr5	ENSMUSG00000022957	ProperStrand	172	chr5	75473198	75473215	protein_coding	Gsx2	utr3	ENSMUSG00000035946	ProperStrand	307	1	-7.9362
chr6	29668456	29668472	protein_coding	Tspan33	utr3	ENSMUSG00000001763	NonProperStrand	4	chr1	84790367	84790442	protein_coding	Trip12	exon	ENSMUSG00000026219	ProperStrand	248	2	-19.7056
chrX	96343918	96343937	protein_coding	Efnb1	utr3	ENSMUSG00000031217	NonProperStrand	2	chr11	6428060	6428170	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-10.4671
chr5	109124122	109132306	protein_coding	Fgfrl1	intron	ENSMUSG00000008090	ProperStrand	111	chr16	23110454	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-4.3449
chr19	44471700	44471779	protein_coding	Scd1	utr3	ENSMUSG00000037071	ProperStrand	32	chr5	130300494	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.6387
chr10	45393828	45393918	protein_coding	Hace1	intron	ENSMUSG00000038822	ProperStrand	8	chr18	33954825	33954905	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-7.4981
chr2	90235291	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr14	32479927	32479943	protein_coding	Btd	exon	ENSMUSG00000021900	NonProperStrand	74	1	-4.0648
chr10	59252639	59252719	protein_coding	Micu1	intron	ENSMUSG00000020111	ProperStrand	4	chr5	134779559	134779650	protein_coding	Gtf2i	intron	ENSMUSG00000060261	ProperStrand	41	1	-22.0881
chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	chr8	124132519	124132568	protein_coding	Zcchc14	exon	ENSMUSG00000061410	ProperStrand	22	2	-17.8873
chr7	29136521	29136542	protein_coding	Rps16	intron	ENSMUSG00000037563	ProperStrand	191	chr7	29136546	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	5	-5.0431
chrX	20222002	20222092	protein_coding	Rbm10	exon	ENSMUSG00000031060	ProperStrand	31	chr17	39985161	39985241	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-7.2447
chr5	54389948	54389967	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	chr4	131908689	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	6	-2.4000
chr3	65152966	65152983	antisense	A730090N16Rik	.	ENSMUSG00000090120	ProperStrand	14	mmu-miR-6240	3	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	2	-14.1144
chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr12	72983883	72983902	protein_coding	Daam1	intron	ENSMUSG00000034574	NonProperStrand	15	1	-9.2502
chr11	52187861	52188429	protein_coding	Vdac1	exon	ENSMUSG00000020402	ProperStrand	107	chr3	152450610	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	1	-7.6492
chr2	166889179	166890662	protein_coding	1500012F01Rik	utr5	ENSMUSG00000074578	ProperStrand	14	chr19	8800382	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-6.3636
chr11	80667895	80667912	antisense	4930507D10Rik	.	ENSMUSG00000086703	NonProperStrand	1	chr7	13516168	13516212	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	1	-inf
chr8	98395806	98396086	protein_coding	Got2	exon	ENSMUSG00000031672	ProperStrand	85	chr6	115757992	115758041	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-4.7966
chr7	54442842	54443894	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	chr12	17552940	17553030	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	2	-3.3986
chr11	83107806	83107886	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	chr18	35714154	35714244	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-0.7243
chr7	56529586	56529608	protein_coding	Nav2	intron	ENSMUSG00000052512	NonProperStrand	11	chr5	121655099	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-11.5308
mmu-miR-1949	5	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr3	130916565	130916659	protein_coding	Lef1	intron	ENSMUSG00000027985	ProperStrand	9	1	-12.0302
chr10	10439853	10439870	protein_coding	Grm1	exon	ENSMUSG00000019828	NonProperStrand	17	chr11	106362334	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-8.3710
mmu-miR-6240	4	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr3	118867070	118867088	protein_coding	Dpyd	intron	ENSMUSG00000033308	ProperStrand	10	1	-9.5334
chr7	134139845	134141754	protein_coding	Mvp	exon	ENSMUSG00000030681	ProperStrand	2	chr7	120019728	120019745	protein_coding	Tead1	exon	ENSMUSG00000055320	NonProperStrand	41	1	-inf
chr13	21874846	21874925	protein_coding	Hist1h3i	exon	ENSMUSG00000075032	ProperStrand	12	chr1	162965531	162965598	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-6.4045
chr15	59187499	59190827	protein_coding	E430025E21Rik	exon	ENSMUSG00000022350	ProperStrand	18	chr5	145888512	145888706	protein_coding	Arpc1b	exon	ENSMUSG00000029622	ProperStrand	17	1	-18.1717
chr17	34763420	34763477	protein_coding	Ppt2	exon	ENSMUSG00000015474	ProperStrand	17	chr12	13333552	13333569	protein_coding	Nbas	intron	ENSMUSG00000020576	NonProperStrand	23	1	-17.6220
chr2	144226444	144226460	protein_coding	Csrp2bp	exon	ENSMUSG00000027425	ProperStrand	32	chr16	43886794	43886928	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	1	-9.3396
chr9	59516481	59516745	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr5	44190635	44190651	protein_coding	Fbxl5	intron	ENSMUSG00000039753	ProperStrand	18	1	-9.6082
chr3	30530350	30530734	protein_coding	Lrrc34	exon	ENSMUSG00000027702	ProperStrand	3	chr2	26493381	26493481	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-9.9740
chr11	113523870	113523888	protein_coding	Cog1	utr3	ENSMUSG00000018661	ProperStrand	51	chr4	131908236	131908421	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-4.7811
chr2	24719358	24732977	protein_coding	Ehmt1	exon	ENSMUSG00000036893	ProperStrand	45	chr4	131908687	131908787	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-4.7431
chr18	32510626	32510706	LTR	RMER13B	ERVK	chr18RMER13B32510253	ProperStrand	1	chr18	32510917	32511005	SINE	B1_Mur3	Alu	chr18B1_Mur332510856	ProperStrand	1	1	-inf
chr8	26629864	26642784	protein_coding	Fgfr1	utr5	ENSMUSG00000091895	ProperStrand	16	chr3	123210854	123210926	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-4.4647
chr15	102136605	102136695	protein_coding	Espl1	intron	ENSMUSG00000058290	ProperStrand	172	chr5	130295428	130295508	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-3.2621
chr16	18559968	18560068	protein_coding	Gnb1l	intron	ENSMUSG00000000884	ProperStrand	25	chr15	27592232	27594103	protein_coding	Fam105a	exon	ENSMUSG00000056069	ProperStrand	29	1	-16.5927
chr17	35295978	35296070	protein_coding	Prrc2a	exon	ENSMUSG00000024393	ProperStrand	315	chr17	35089184	35089235	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-2.4167
chr11	22890694	22890754	protein_coding	Cct4	utr5	ENSMUSG00000007739	ProperStrand	81	chr19	31157628	31157644	protein_coding	Cstf2t	exon	ENSMUSG00000053536	ProperStrand	48	1	-13.1596
chr11	78313939	78313956	protein_coding	Vtn	exon	ENSMUSG00000017344	ProperStrand	188	chr2	130103449	130103501	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-5.8037
chr2	119558233	119558530	protein_coding	Rtf1	exon	ENSMUSG00000027304	ProperStrand	12	chr11	69483136	69483194	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-9.0896
chr6	29161967	29161985	protein_coding	Impdh1	intron	ENSMUSG00000003500	NonProperStrand	22	chr10	80641693	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	1	-9.5706
chr13	49779666	49779802	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	chr5	74489585	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	6	-1.1818
mmu-miR-6240	3	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr1	185857228	185857244	protein_coding	1700056E22Rik	exon	ENSMUSG00000044854	ProperStrand	173	1	-3.8694
chr16	20284050	20284101	protein_coding	Parl	intron	ENSMUSG00000033918	ProperStrand	19	chr6	115758032	115758122	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-7.7658
chr11	78337280	78337344	protein_coding	Tnfaip1	utr3	ENSMUSG00000017615	ProperStrand	30	chr5	130300470	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.7596
chr3	113827103	113827119	protein_coding	Col11a1	utr3	ENSMUSG00000027966	NonProperStrand	139	chr1	162965981	162966020	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-2.1299
chr18	70728166	70728193	protein_coding	Mbd2	utr5	ENSMUSG00000024513	ProperStrand	10	chr3	99897893	99897911	protein_coding	Spag17	intron	ENSMUSG00000027867	ProperStrand	5	1	-19.5370
chr2	69570272	69570478	protein_coding	Ppig	exon	ENSMUSG00000042133	ProperStrand	13	chr9	120039543	120039620	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-10.2921
chr5	115169677	115169694	protein_coding	Tchp	exon	ENSMUSG00000002486	ProperStrand	19	chr12	17552949	17552995	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-7.3736
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr2	145076803	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-2.6323
chr6	54379743	54379760	lincRNA	9130019P16Rik	exon	ENSMUSG00000073067	ProperStrand	255	chr9	120038466	120038587	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	3	-2.7670
chr7	97573269	97573359	LINE	Lx8	L1	chr7Lx897572558	NonProperStrand	1	chr8	128529923	128530013	protein_coding	Kcnk1	intron	ENSMUSG00000033998	ProperStrand	16	1	-inf
chr8	108416203	108416293	protein_coding	Edc4	exon	ENSMUSG00000036270	ProperStrand	34	chr19	8798507	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-6.3293
chr15	37933844	37933905	protein_coding	Ubr5	exon	ENSMUSG00000037487	ProperStrand	258	chr12	109460710	109460726	protein_coding	Ccdc85c	intron	ENSMUSG00000084883	ProperStrand	157	1	-8.4635
chr7	52713457	52713485	protein_coding	Ftl1	utr3	ENSMUSG00000050708	ProperStrand	807	chr17	12585979	12585995	protein_coding	Plg	exon	ENSMUSG00000059481	ProperStrand	86	1	-7.3987
chr4	140874907	140881212	protein_coding	Epha2	intron	ENSMUSG00000006445	ProperStrand	148	chr18	35716684	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-4.2108
chr11	62951997	62952014	protein_coding	Pmp22	intron	ENSMUSG00000018217	NonProperStrand	40	chr4	131865856	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.4299
chr3	33909518	33909538	SINE	ID_B1	B4	chr3ID_B133909499	NonProperStrand	1	chr2	157694073	157694103	protein_coding	Ctnnbl1	exon	ENSMUSG00000027649	ProperStrand	26	1	-inf
chr4	131908417	131908462	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	1	-2.9736
chr4	131908410	131908464	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr11	116535915	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	1	-0.7592
chr19	47202904	47202925	protein_coding	Pdcd11	exon	ENSMUSG00000025047	ProperStrand	137	chr6	115758008	115758120	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	3	-9.4909
chr3	95125786	95125862	protein_coding	Lass2	exon	ENSMUSG00000015714	ProperStrand	16	chr3	88497892	88497983	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	4	-20.3098
chr14	25311000	25311181	protein_coding	Rps24	exon	ENSMUSG00000025290	ProperStrand	110	chr7	148634732	148634812	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	12	-inf
chr15	78939631	78939647	protein_coding	Micall1	utr5	ENSMUSG00000033039	ProperStrand	48	chr2	29014439	29014455	protein_coding	Setx	exon	ENSMUSG00000043535	ProperStrand	187	1	-11.4827
chr1	173433177	173433255	protein_coding	B930036N10Rik	utr3	ENSMUSG00000091993	ProperStrand	150	chr7	116663633	116663723	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-2.1598
chr13	34436854	34436870	protein_coding	Slc22a23	utr5	ENSMUSG00000038267	ProperStrand	95	chr4	127002552	127002629	protein_coding	Gjb3	utr3	ENSMUSG00000042367	ProperStrand	4	1	-17.9620
chr7	150252571	150252607	protein_coding	Cd81	exon	ENSMUSG00000037706	ProperStrand	88	chr9	64023698	64023746	snoRNA	ENSMUSG00000064918_SNORD18	.	ENSMUSG00000064918	ProperStrand	370	1	-8.9013
chr5	149994654	149994671	lincRNA	5730422E09Rik	intron	ENSMUSG00000086085	ProperStrand	12	chr17	39985500	39985517	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-9.1812
chr2	32087239	32087368	protein_coding	Prrc2b	utr3	ENSMUSG00000039262	ProperStrand	344	chr3	53284534	53284552	protein_coding	2810046L04Rik	utr3	ENSMUSG00000049504	ProperStrand	15	1	-12.6334
chrX	98867859	98868400	protein_coding	Ogt	exon	ENSMUSG00000034160	ProperStrand	49	chr9	120037976	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-5.0975
chr11	107812869	107812887	protein_coding	Prkca	exon	ENSMUSG00000050965	ProperStrand	48	chr19	8799590	8799627	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-7.2106
mmu-miR-6240	2	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr5	117813745	117813762	protein_coding	Wsb2	exon	ENSMUSG00000029364	ProperStrand	15	1	-8.6903
chr9	107987766	107987856	protein_coding	Apeh	utr3	ENSMUSG00000032590	ProperStrand	7	chrX	34622940	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-7.4170
chr4	115484059	115484085	protein_coding	Atpaf1	utr3	ENSMUSG00000028710	ProperStrand	202	chr5	121655017	121655096	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	3	-4.7418
chr18	48207074	48207161	protein_coding	Gm5506	exon	ENSMUSG00000059040	ProperStrand	105	chr19	8963085	8963175	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.4033
chr8	86464101	86464174	protein_coding	Lphn1	utr3	ENSMUSG00000013033	ProperStrand	221	chr2	63936037	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-5.2913
chr5	42136455	42136473	Low_complexity	GA-rich	Low_complexity	chr5GA-rich42136449	NonProperStrand	106	chrX	71191474	71191553	protein_coding	Hcfc1	exon	ENSMUSG00000031386	ProperStrand	424	2	-13.1522
chr6	35169698	35169794	protein_coding	Nup205	exon	ENSMUSG00000038759	ProperStrand	56	chr9	15119733	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.7499
chr4	141674546	141674646	protein_coding	Kazn	intron	ENSMUSG00000040606	NonProperStrand	12	chr4	131908809	131908896	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	6	-20.4528
chr8	12757419	12757437	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr10	23505538	23505621	protein_coding	Rps12	intron	ENSMUSG00000061983	ProperStrand	309	1	-5.3552
chr1	134401007	134401024	protein_coding	Rbbp5	utr3	ENSMUSG00000026439	NonProperStrand	33	chr9	120039627	120039678	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-4.4403
chr2	57207945	57220519	protein_coding	Gpd2	utr3	ENSMUSG00000026827	ProperStrand	93	chr4	131908236	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-2.8318
chr9	72566067	72595252	protein_coding	Nedd4	exon	ENSMUSG00000032216	ProperStrand	308	chr19	8963027	8963124	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	9	-7.4372
chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	chr19	8799022	8799048	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-0.9889
chr1	182931949	182931969	protein_coding	Ephx1	exon	ENSMUSG00000038776	ProperStrand	26	chr8	73419672	73419742	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-7.8290
chr4	131469115	131469133	processed_transcript	Gm12992	.	ENSMUSG00000085667	NonProperStrand	2	chr17	35089184	35089237	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-12.9029
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr4	121870880	122132506	pseudogene	Gm12896	.	ENSMUSG00000083558	NonProperStrand	19	1	-9.2410
chr2	180208273	180208363	protein_coding	Slco4a1	exon	ENSMUSG00000038963	ProperStrand	10	chr19	8963094	8963174	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-9.3759
chr11	119368782	119368872	protein_coding	A730011L01Rik	utr3	ENSMUSG00000039850	ProperStrand	25	chr15	79913300	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-5.2686
chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	chr11	62416621	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-1.2640
chr19	36926970	36927318	protein_coding	Tnks2	exon	ENSMUSG00000024811	ProperStrand	133	chr1	162968262	162968289	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-5.2539
chr2	26493363	26493386	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr14	67670726	67670816	protein_coding	Ppp2r2a	intron	ENSMUSG00000022052	ProperStrand	45	1	-6.7647
chr3	46250662	46250678	protein_coding	Pabpc4l	exon	ENSMUSG00000090919	ProperStrand	137	chr16	43886803	43886849	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	1	-6.4362
chr13	12650784	12650841	SINE	B3	B2	chr13B312650733	ProperStrand	4	chr4	137676300	137676366	protein_coding	Eif4g3	exon	ENSMUSG00000028760	ProperStrand	42	1	-18.9365
chr4	122970471	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	chr14	31827515	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-1.5450
chr8	125031617	125031639	protein_coding	Fam38a	utr5	ENSMUSG00000014444	ProperStrand	132	chr4	122968617	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-4.7446
chr2	143774144	143775014	protein_coding	Rrbp1	exon	ENSMUSG00000027422	ProperStrand	76	chr8	126476518	126476608	protein_coding	Abcb10	utr3	ENSMUSG00000031974	ProperStrand	13	6	-19.6213
chr10	90581049	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	chr4	132394367	132394451	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	1	-1.2207
chr16	96226042	96226132	protein_coding	Brwd1	exon	ENSMUSG00000022914	ProperStrand	77	chr16	23111420	23111500	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-3.0607
chr17	56236417	56236535	protein_coding	Hdgfrp2	exon	ENSMUSG00000002833	ProperStrand	36	chr7	57041565	57041581	protein_coding	Prmt3	exon	ENSMUSG00000030505	ProperStrand	89	1	-13.5577
chr9	64022855	64022904	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	chr5	74489575	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	7	-3.9813
chr17	66692921	66693001	protein_coding	1110012J17Rik	exon	ENSMUSG00000052105	ProperStrand	60	chr8	32260342	32260432	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-4.6300
chr14	79980170	79980186	protein_coding	Elf1	exon	ENSMUSG00000036461	NonProperStrand	17	chr1	63225577	63225629	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-9.2096
chr8	112833096	112836065	protein_coding	Hydin	exon	ENSMUSG00000059854	NonProperStrand	42	chr11	62418014	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	3	-14.3755
chr2	120872244	120872260	protein_coding	Tgm5	exon	ENSMUSG00000053675	NonProperStrand	163	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-1.9267
chr12	17287429	17287791	protein_coding	Pdia6	exon	ENSMUSG00000020571	ProperStrand	114	chr15	81695901	81695938	protein_coding	Phf5a	utr3	ENSMUSG00000061360	ProperStrand	3	1	-18.8256
chr10	5992258	6063978	protein_coding	Akap12	exon	ENSMUSG00000038587	ProperStrand	1008	chr1	162965980	162966045	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	13	-8.8142
chr8	108687225	108687282	protein_coding	Pla2g15	utr3	ENSMUSG00000031903	ProperStrand	40	chr3	108189476	108189534	protein_coding	Psrc1	exon	ENSMUSG00000068744	ProperStrand	38	7	-inf
chr11	120673268	120673380	protein_coding	Fasn	exon	ENSMUSG00000025153	ProperStrand	298	chr4	129306363	129306438	protein_coding	Txlna	exon	ENSMUSG00000053841	ProperStrand	37	2	-17.3346
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr17	25792454	25792471	protein_coding	Lmf1	exon	ENSMUSG00000002279	NonProperStrand	12	1	-11.0688
chr2	84886581	84886804	protein_coding	Ssrp1	exon	ENSMUSG00000027067	ProperStrand	118	chr11	106429491	106429525	protein_coding	Tex2	exon	ENSMUSG00000040548	ProperStrand	24	1	-13.8088
chr7	51828028	51828044	protein_coding	Napsa	exon	ENSMUSG00000002204	ProperStrand	88	chr3	123210964	123210985	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.4749
chr3	157474048	157474128	LTR	MTA_Mm	MaLR	chr3MTA_Mm157474063	NonProperStrand	1	chr3	58457423	58457513	LTR	MTA_Mm	MaLR	chr3MTA_Mm58457231	NonProperStrand	1	1	-inf
chr14	21549449	21549516	protein_coding	Ndst2	utr5	ENSMUSG00000039308	ProperStrand	2	chr10	23505204	23505236	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-inf
chr16	20659501	20659548	protein_coding	Psmd2	exon	ENSMUSG00000006998	ProperStrand	99	chr18	73693166	73693186	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	2	-7.5632
chr17	67712818	67712835	LTR	ORR1E	MaLR	chr17ORR1E67712788	ProperStrand	39	chr9	50816824	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	1	-12.6772
chr17	25996060	25996076	protein_coding	Wdr90	exon	ENSMUSG00000073434	ProperStrand	91	chr17	35299519	35299619	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-3.9849
chr3	90056615	90056701	protein_coding	Slc39a1	utr3	ENSMUSG00000052310	ProperStrand	6	chrX	34622906	34622937	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-7.7498
chr17	24857717	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	chr7	67125762	67125831	snoRNA	ENSMUSG00000089375_Snord107	.	ENSMUSG00000089375	ProperStrand	451	5	-1.5213
chr4	151420140	151420672	protein_coding	Nol9	exon	ENSMUSG00000028948	ProperStrand	93	chr4	131908234	131908272	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.8464
chr4	144758457	144758474	protein_coding	Vps13d	exon	ENSMUSG00000020220	ProperStrand	59	chrX	49518284	49518316	protein_coding	Gpc4	utr5	ENSMUSG00000031119	ProperStrand	8	1	-17.3582
chr17	73267716	73267733	protein_coding	Lbh	utr5	ENSMUSG00000024063	ProperStrand	4	chr9	41799740	41799808	protein_coding	Sorl1	exon	ENSMUSG00000049313	ProperStrand	112	1	-17.8551
chr4	62318892	62318908	protein_coding	Rgs3	utr3	ENSMUSG00000059810	ProperStrand	40	chr4	122968661	122968719	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	3	-16.0221
chr6	140132557	140132578	SINE	RSINE1	B4	chr6RSINE1140132527	NonProperStrand	1	chr5	121655016	121655098	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	NonProperStrand	38	1	-inf
chr18	35744417	35744486	protein_coding	Matr3	exon	ENSMUSG00000037236	ProperStrand	90	chr16	23111466	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.7546
chr11	5776903	5776955	protein_coding	Pold2	utr5	ENSMUSG00000020471	ProperStrand	58	chr10	126955426	126955616	protein_coding	Shmt2	exon	ENSMUSG00000025403	ProperStrand	94	1	-12.4796
chr10	127460846	127460870	protein_coding	Prim1	exon	ENSMUSG00000025395	ProperStrand	12	chr3	33713610	33713626	protein_coding	Ccdc39	exon	ENSMUSG00000027676	ProperStrand	106	1	-15.4483
chr17	46814084	46814100	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr2	154617105	154617149	protein_coding	Raly	utr5	ENSMUSG00000027593	ProperStrand	116	1	-7.9128
chr10	80641694	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	chr11	69481366	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	6	-1.0588
chr2	129094824	129094906	protein_coding	Ckap2l	exon	ENSMUSG00000048327	ProperStrand	16	chr16	23110964	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.9771
chr7	52382751	52382831	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	chr8	129468749	129468881	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	6	-1.8278
chr14	98738585	98738601	LINE	L1MEf	L1	chr14L1MEf98738356	ProperStrand	8	chr11	62418037	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-9.6511
chr5	147646728	147646818	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	chr9	64143745	64143795	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-2.6610
chr12	25397613	25397770	protein_coding	Rrm2	exon	ENSMUSG00000020649	ProperStrand	65	chr19	9052551	9052586	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	1	-9.3037
chr9	19462309	19462399	LINE	L1Md_A	L1	chr9L1Md_A19461964	ProperStrand	81	chr7	91470931	91471021	protein_coding	Arnt2	intron	ENSMUSG00000015709	ProperStrand	11	1	-16.1466
chr12	100574660	100574680	protein_coding	Foxn3	intron	ENSMUSG00000033713	ProperStrand	74	chrX	152009278	152009294	protein_coding	Ptchd1	exon	ENSMUSG00000041552	NonProperStrand	294	1	-9.7070
chr4	151368477	151368495	protein_coding	Phf13	intron	ENSMUSG00000047777	ProperStrand	38	chr16	23110455	23110518	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.2698
chr15	82980100	82980224	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr9	15119640	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	14	-2.6864
chr2	26494760	26494825	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	chr15	71624615	71624640	snoRNA	ENSMUSG00000088895_SNORA81	.	ENSMUSG00000088895	ProperStrand	348	2	-1.1746
chr2	26493440	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-0.7649
chr4	59788285	59788340	protein_coding-noncoding	1110054O05Rik	utr3	ENSMUSG00000038544	ProperStrand	1	chr16	23110828	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr18	36817645	36817751	protein_coding	Ankhd1	utr3	ENSMUSG00000024483	ProperStrand	56	chr16	23110964	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	9	-9.3665
chrX	133274352	133275767	protein_coding	Morf4l2	utr5	ENSMUSG00000031422	ProperStrand	113	chr16	23111761	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-0.9982
chr9	108111076	108111166	protein_coding	Dag1	exon	ENSMUSG00000039952	ProperStrand	54	chr11	69730604	69730684	protein_coding	Eif5a	utr3	ENSMUSG00000078812	ProperStrand	164	1	-11.5080
chr6	62355231	62355249	LTR	IAP-d-int	ERVK	chr6IAP-d-int62354588	ProperStrand	2	chr1	162968441	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-13.5157
chr3	156224612	156224628	lincRNA	4930570G19Rik	exon	ENSMUSG00000085084	ProperStrand	326	mmu-miR-2137	0	15	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	1	-8.1704
chr4	56910500	56910600	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	chr7	67125763	67125822	snoRNA	ENSMUSG00000089375_Snord107	.	ENSMUSG00000089375	ProperStrand	451	1	-2.3495
chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	chr2	162792388	162792729	protein_coding	L3mbtl1	exon	ENSMUSG00000035576	NonProperStrand	4	1	-18.0577
chr13	112540780	112541440	protein_coding	Map3k1	exon	ENSMUSG00000021754	ProperStrand	113	chr15	101834699	101834715	protein_coding	Krt8	utr5	ENSMUSG00000049382	NonProperStrand	6	1	-16.8203
chr3	87719715	87719805	protein_coding	Hdgf	utr3	ENSMUSG00000004897	ProperStrand	117	chr7	135058744	135058900	protein_coding	Myst1	exon	ENSMUSG00000030801	ProperStrand	4	1	-17.6591
chr3	101359453	101359543	LTR	MERVL_2A-int	ERVL	chr3MERVL_2A-int101359474	ProperStrand	1	chr3	101359830	101359920	SINE	B3	B2	chr3B3101359694	ProperStrand	1	1	-inf
chr4	129989687	129991258	protein_coding	Fabp3	exon	ENSMUSG00000028773	ProperStrand	93	chr1	162965579	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.5023
chr14	33005094	33005194	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	chr1	172975148	172975189	tRNA	tRNA699-GlyGCC	.	832856	ProperStrand	660	2	-0.9221
chrX	132673816	132673833	protein_coding	Bex4	intron	ENSMUSG00000047844	NonProperStrand	70	chr5	121655022	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.4626
chr1	129701994	129702068	protein_coding	Ccnt2	utr3	ENSMUSG00000026349	ProperStrand	34	chr5	74489595	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-4.8608
chr2	158185554	158185655	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr1	162966828	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	3	-2.0047
chr9	110796799	110796889	protein_coding	Als2cl	exon	ENSMUSG00000044037	ProperStrand	10	chr7	116663662	116663742	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-5.9268
chr9	119667776	119667793	protein_coding	Scn11a	exon	ENSMUSG00000034115	NonProperStrand	4	chr9	15119630	15119694	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-8.0470
chr3	131874257	131874347	LTR	MT2A	ERVL	chr3MT2A131873939	ProperStrand	1	chr7	54442471	54442551	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-inf
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr11	68716790	68717871	protein_coding	Rpl26	exon	ENSMUSG00000060938	ProperStrand	130	1	-5.5054
chr12	17552949	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr7	150717298	150717425	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	10	-3.2703
chr6	122679553	122690449	protein_coding	Slc2a3	exon	ENSMUSG00000003153	ProperStrand	682	chr4	131865855	131865979	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	13	-3.0234
chr16	37384897	37384913	protein_coding	Stxbp5l	utr5	ENSMUSG00000022829	ProperStrand	332	chr12	88778746	88778767	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-3.2300
chr9	44190618	44192258	protein_coding	Hyou1	exon	ENSMUSG00000032115	ProperStrand	145	chr7	52378401	52378473	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	1	-6.7488
chr16	16323855	16324068	protein_coding	Dnm1l	exon	ENSMUSG00000022789	NonProperStrand	38	chr2	130101991	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	4	-19.0422
chr3	123061808	123061849	protein_coding	Sec24d	exon	ENSMUSG00000039234	ProperStrand	22	chr10	23505152	23505203	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.8416
chr4	107973053	107973069	protein_coding	Zyg11b	intron	ENSMUSG00000034636	NonProperStrand	17	chr14	33005038	33005092	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-6.4617
chr8	80041484	80041501	protein_coding	Arhgap10	intron	ENSMUSG00000037148	ProperStrand	58	chr18	35716684	35716724	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.2257
chr10	126502218	126502249	protein_coding	Cdk4	exon	ENSMUSG00000006728	ProperStrand	47	chr18	33954816	33954862	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-6.6726
chr1	162965531	162965555	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr13	21802463	21802529	tRNA	tRNA77-GlyGCC	.	1190667	ProperStrand	5	1	-8.2678
chr5	104283007	104283024	protein_coding	Aff1	utr3	ENSMUSG00000029313	ProperStrand	82	chr19	8963062	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.7714
chr7	27596534	27596550	protein_coding	Cyp2g1	exon	ENSMUSG00000049685	NonProperStrand	1	chr4	139024728	139025643	protein_coding	Ubr4	exon	ENSMUSG00000066036	NonProperStrand	14	1	-inf
chr4	9444870	9457037	protein_coding	Asph	exon	ENSMUSG00000028207	ProperStrand	14	chr9	15118518	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	1	-12.3040
chr7	142364631	142364647	protein_coding	Dock1	utr3	ENSMUSG00000058325	NonProperStrand	18	chr2	26493442	26493496	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-6.0815
chr18	35989606	35989624	protein_coding	Cxxc5	utr5	ENSMUSG00000046668	ProperStrand	30	chr4	131865868	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-7.5994
chrX	99383205	99383252	protein_coding	Rps4x	exon	ENSMUSG00000031320	ProperStrand	139	chr7	29136556	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.0945
chr2	166890559	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	chr1	187066785	187066847	snoRNA	ENSMUSG00000077571_Snora36b	.	ENSMUSG00000077571	ProperStrand	244	1	-4.8059
chr11	115992381	115992397	protein_coding	Trim65	utr5	ENSMUSG00000054517	ProperStrand	3	chr2	26494708	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-15.5516
chr1	54490984	54491074	protein_coding	Gtf3c3	exon	ENSMUSG00000041303	ProperStrand	11	chr15	34370618	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-6.8789
chr18	38409775	38409791	lincRNA	1700086O06Rik	exon	ENSMUSG00000086988	NonProperStrand	28	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-7.3584
mmu-miR-6238	2	20	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr11	6428035	6428119	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.0038
chr7	20036966	20036982	protein_coding	Mark4	exon	ENSMUSG00000030397	ProperStrand	18	chr11	62416601	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-7.5628
chr9	66247161	66247247	protein_coding	Herc1	exon	ENSMUSG00000038664	ProperStrand	81	chr3	85944554	85944595	snoRNA	ENSMUSG00000064390_Rnu73b	.	ENSMUSG00000064390	ProperStrand	164	2	-16.8426
chr8	112201385	112201475	protein_coding	2400003C14Rik	exon	ENSMUSG00000031729	NonProperStrand	1	chr8	112821365	112821445	protein_coding	Hydin	intron	ENSMUSG00000059854	ProperStrand	47	1	-inf
chr17	24858108	24858149	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr7	99251120	99251145	protein_coding	Dlg2	intron	ENSMUSG00000052572	ProperStrand	33	1	-10.8591
chr19	44188368	44188419	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr19	9043664	9043692	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	2	-6.7824
chr2	33836171	33836187	Low_complexity	GA-rich	Low_complexity	chr2GA-rich33836107	ProperStrand	1	chr8	86211057	86214966	protein_coding	Pkn1	exon	ENSMUSG00000057672	ProperStrand	36	1	-inf
chr7	64845987	64846004	protein_coding	Gabrb3	exon	ENSMUSG00000033676	ProperStrand	16	chr11	69483181	69483237	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.9072
chr2	120333563	120333653	protein_coding	Zfp106	utr3	ENSMUSG00000027288	ProperStrand	199	chr11	6428075	6428154	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.2484
chr11	29593652	29607296	protein_coding	Rtn4	exon	ENSMUSG00000020458	ProperStrand	117	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-4.2536
chr17	56826440	56826530	protein_coding	Ranbp3	intron	ENSMUSG00000002372	ProperStrand	34	chr8	98269967	98270047	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-6.6641
chr5	118376503	118376519	protein_coding	Nos1	exon	ENSMUSG00000029361	NonProperStrand	237	chr17	88036096	88036155	protein_coding	Epcam	utr5	ENSMUSG00000045394	ProperStrand	43	1	-11.2305
chr12	92806020	92806143	protein_coding	Gtf2a1	exon	ENSMUSG00000020962	ProperStrand	61	chr7	118219574	118219611	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-4.1392
chr2	173936875	173936975	protein_coding	Npepl1	intron	ENSMUSG00000039263	ProperStrand	5	chr18	35716788	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-6.9999
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr7	116663692	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.0416
chr18	37911790	37911806	protein_coding	Pcdhga9	intron	ENSMUSG00000023036	ProperStrand	245	chr7	134633632	134633692	protein_coding	Fbrs	exon	ENSMUSG00000042423	ProperStrand	7	1	-14.9273
chr14	34776834	34776850	protein_coding	Rbp3	utr3	ENSMUSG00000041534	NonProperStrand	41	chr16	23111690	23111713	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.5349
chr15	3753800	3753880	LINE	L1_Mur2	L1	chr15L1_Mur23753789	NonProperStrand	1	chr3	66715777	66715867	LINE	L1Md_T	L1	chr3L1Md_T66715527	NonProperStrand	1	1	-inf
chr6	54379743	54379760	lincRNA	9130019P16Rik	exon	ENSMUSG00000073067	ProperStrand	255	chr5	109089582	109089634	protein_coding	Dgkq	exon	ENSMUSG00000004815	ProperStrand	9	1	-14.3023
chr17	75198695	75228865	protein_coding	Ttc27	exon	ENSMUSG00000024078	ProperStrand	14	chr7	117166756	117166836	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	9	-21.8982
chr17	94272331	94272351	LINE	L1MCa	L1	chr17L1MCa94272218	NonProperStrand	1	chr1	162966813	162966850	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-inf
chr11	62416575	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	chr2	32818804	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	6	-1.0326
chr16	23111375	23111465	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	chr8	87574107	87574176	snoRNA	ENSMUSG00000077527_SNORD41	.	ENSMUSG00000077527	ProperStrand	29	1	-2.3903
chr2	90235292	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr12	55796767	55796784	protein_coding	Eapp	utr5	ENSMUSG00000054302	NonProperStrand	62	1	-4.4001
chr8	13416895	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr1	88252837	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	2	-1.4873
chr11	55220043	55220765	protein_coding	Sparc	exon	ENSMUSG00000018593	ProperStrand	48	chr6	115758050	115758071	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-5.9099
chr11	109566365	109566383	protein_coding	Fam20a	intron	ENSMUSG00000020614	NonProperStrand	1	chr16	23110829	23111697	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr4	99577397	99577413	protein_coding	Itgb3bp	intron	ENSMUSG00000028549	ProperStrand	55	chr11	98878344	98878452	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-6.4567
chr8	98269993	98270082	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	chr1	9932546	9932605	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	2	-1.6501
chr6	131337993	131338009	protein_coding	Csda	intron	ENSMUSG00000030189	ProperStrand	86	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-10.9617
chr2	104689880	104689896	protein_coding	Prrg4	utr5	ENSMUSG00000027171	NonProperStrand	6	chr5	115939532	115939559	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-12.6166
chr2	4974190	4974207	protein_coding	Optn	exon	ENSMUSG00000026672	ProperStrand	451	chr4	132753174	132753230	protein_coding	Wasf2	utr3	ENSMUSG00000028868	ProperStrand	56	1	-9.4129
chr10	116661243	116661260	protein_coding	Yeats4	intron	ENSMUSG00000020171	NonProperStrand	1	chr7	29136548	29136599	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-inf
chr1	60151279	60151354	protein_coding	Wdr12	exon	ENSMUSG00000026019	ProperStrand	36	chr16	23110981	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-4.1846
chr5	66285608	66285624	protein_coding	Rhoh	utr3	ENSMUSG00000029204	NonProperStrand	2	chr15	79913298	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-10.9071
chr8	123055376	123055476	protein_coding	Gse1	intron	ENSMUSG00000031822	ProperStrand	97	chr10	116500077	116500783	protein_coding	Cct2	exon	ENSMUSG00000034024	ProperStrand	100	1	-11.3222
chr12	100021906	100023135	protein_coding	Zc3h14	exon	ENSMUSG00000021012	ProperStrand	27	chr10	107800719	107800805	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	2	-15.3414
chr17	32338025	32338055	protein_coding	Brd4	exon	ENSMUSG00000024002	ProperStrand	121	chr12	106269284	106269384	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-2.8556
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr8	114497509	114497571	protein_coding	Adat1	intron	ENSMUSG00000031949	ProperStrand	19	2	-13.8498
chr6	34587123	34587140	protein_coding	Cald1	intron	ENSMUSG00000029761	ProperStrand	19	chr11	106362640	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-9.7254
chr2	35834934	35834950	protein_coding	Ttll11	utr5	ENSMUSG00000026885	NonProperStrand	9	chr1	157780228	157780244	protein_coding	Cep350	exon	ENSMUSG00000033671	ProperStrand	48	1	-17.5632
chr15	96418195	96418260	protein_coding	Slc38a1	intron	ENSMUSG00000023169	ProperStrand	69	chr1	162966814	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	3	-13.7793
chr12	102242408	102242426	protein_coding	Ccdc88c	intron	ENSMUSG00000021182	ProperStrand	151	chr15	85705598	85705972	protein_coding	Gtse1	exon	ENSMUSG00000022385	ProperStrand	74	2	-17.3386
chr2	126684201	126701711	protein_coding	Trpm7	exon	ENSMUSG00000027365	ProperStrand	34	chr9	121823892	121823908	protein_coding	Cyp8b1	exon	ENSMUSG00000050445	NonProperStrand	101	1	-13.4130
chr17	24665414	24665442	antisense	2610019E17Rik	.	ENSMUSG00000093565	ProperStrand	24	chr7	116663634	116663724	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-10.2381
chr9	95791260	95793891	protein_coding	Atr	exon	ENSMUSG00000032409	ProperStrand	44	chr19	8963073	8963163	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.8083
chr2	27118754	27118771	protein_coding	Vav2	utr3	ENSMUSG00000009621	ProperStrand	14	chr11	106362638	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-10.3542
chr12	112350475	112350495	protein_coding	Rcor1	utr3	ENSMUSG00000037896	ProperStrand	20	chr4	131908689	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.0012
chr10	39231736	39235402	protein_coding	Fyn	exon	ENSMUSG00000019843	ProperStrand	9	chr11	69483191	69483271	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-6.0733
chr5	76051468	76051511	protein_coding	Kit	utr3	ENSMUSG00000005672	ProperStrand	58	chr5	74489564	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-3.8413
chr4	135172637	135172717	Other	RMER1A	Other	chr4RMER1A135172592	NonProperStrand	1	chr8	74009377	74009467	protein_coding	Ano8	intron	ENSMUSG00000034863	ProperStrand	7	1	-inf
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr2	30328698	30328715	protein_coding	Ier5l	exon	ENSMUSG00000089762	NonProperStrand	1	1	-inf
chr18	75257569	75257659	protein_coding	Dym	intron	ENSMUSG00000035765	ProperStrand	22	chr19	8963096	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.0882
chr5	116071701	116071718	protein_coding	Gcn1l1	exon	ENSMUSG00000041638	ProperStrand	408	chr17	24342579	24342596	protein_coding	Ntn3	utr3	ENSMUSG00000079662	ProperStrand	237	1	-6.7387
chr11	77996606	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	chr3	96145076	96145133	tRNA	tRNA756-GlnCTG	.	1722216	ProperStrand	4	1	-11.7357
chr4	139295481	139295497	protein_coding	Pax7	utr3	ENSMUSG00000028736	ProperStrand	23	chr18	73693112	73693138	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-7.4314
chr11	50112811	50114420	protein_coding	Canx	exon	ENSMUSG00000020368	ProperStrand	296	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-4.6005
chrX	148481315	148481448	protein_coding	Smc1a	exon	ENSMUSG00000041133	ProperStrand	104	chr18	35714166	35714256	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	4	-8.9050
chrX	93358775	93359127	protein_coding	Msn	exon	ENSMUSG00000031207	ProperStrand	71	chr4	131908809	131908881	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.0037
chr8	86095467	86095500	protein_coding	Ndufb7	utr3	ENSMUSG00000033938	ProperStrand	7	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-8.9603
chr1	179840736	179840826	LTR	ORR1A3	MaLR	chr1ORR1A3179840553	NonProperStrand	1	chr1	179840904	179840984	LTR	RLTR11A2	ERVK	chr1RLTR11A2179840901	NonProperStrand	1	1	-inf
chr7	51503405	51503480	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	chr10	110918595	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	8	-5.8002
chr3	11957845	11957863	LINE	Lx	L1	chr3Lx11957450	ProperStrand	1	chr16	23111760	23111821	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-inf
chr2	120982396	120982417	protein_coding	Adal	utr3	ENSMUSG00000027259	ProperStrand	2	chr17	25996060	25996076	protein_coding	Wdr90	exon	ENSMUSG00000073434	ProperStrand	91	1	-22.1974
chr2	32190465	32190486	protein_coding	Dnm1	intron	ENSMUSG00000026825	ProperStrand	10	chr7	116664819	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-14.1581
chr4	43505689	43505779	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr16	3856858	3856878	protein_coding	Zfp174	utr3	ENSMUSG00000054939	NonProperStrand	166	1	-1.4063
chr19	53755581	53755602	protein_coding	Rbm20	intron	ENSMUSG00000043639	NonProperStrand	5	chr9	15119631	15119708	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-7.5411
chr9	115170709	115170729	protein_coding	Stt3b	intron	ENSMUSG00000032437	ProperStrand	66	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-6.4025
chr16	31261892	31262526	protein_coding	Ppp1r2	intron	ENSMUSG00000047714	ProperStrand	10	chr3	123210853	123210933	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-13.0156
chr8	13876159	13876226	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	chr1	59761682	59761716	snoRNA	ENSMUSG00000089093_Snord11	.	ENSMUSG00000089093	ProperStrand	193	4	-15.1266
chr14	21182028	21197251	protein_coding	Fam149b	intron	ENSMUSG00000039599	ProperStrand	6	chr16	23110958	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-6.6757
chr4	135606273	135607145	protein_coding	Rpl11	exon	ENSMUSG00000059291	ProperStrand	152	chr19	8799582	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	3	-11.6493
chr6	89059111	89059200	protein_coding	4933427D06Rik	utr3	ENSMUSG00000055403	ProperStrand	12	chr2	89368462	89368479	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	1	-13.6438
chr15	82725597	82725637	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	chr5	74489543	74489676	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	2	-0.7580
chr7	134416287	134416377	protein_coding	Sephs2	exon	ENSMUSG00000049091	ProperStrand	15	chr8	98269972	98270052	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-8.3205
chr5	100855902	100855943	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr11	62416950	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	2	-1.1119
chr10	91951428	91951444	LTR	RLTR14-int	ERV1	chr10RLTR14-int91951024	ProperStrand	2	chr9	21308971	21309071	protein_coding	Dnm2	exon	ENSMUSG00000033335	NonProperStrand	2	1	-inf
chr3	125971145	125971162	LTR	RLTR42-int	ERVK	chr3RLTR42-int125970477	NonProperStrand	8	chr17	24857716	24857776	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-6.1404
chr19	7354397	7354440	protein_coding	Mark2	utr3	ENSMUSG00000024969	ProperStrand	75	chr11	6519810	6519865	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	2	-12.0119
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr11	62418013	62418077	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-0.8276
chr16	40356228	40356244	LINE	L1MDa	L1	chr16L1MDa40356114	NonProperStrand	1	chr10	23505559	23505604	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-inf
chr16	18253414	18253545	protein_coding	Trmt2a	utr3	ENSMUSG00000022721	ProperStrand	28	chr5	130300534	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.8897
chr11	69550430	69550702	protein_coding	Polr2a	exon	ENSMUSG00000005198	ProperStrand	200	chr8	72426929	72426945	protein_coding	Tssk6	exon	ENSMUSG00000047654	NonProperStrand	4	1	-16.5424
chr12	114290175	114290191	protein_coding	Pacs2	intron	ENSMUSG00000021143	NonProperStrand	302	chr7	127979054	127979074	tRNA	tRNA861-LeuTAG	.	1888579	ProperStrand	49	1	-10.4825
chr11	69617603	69617693	protein_coding	Tmem102	exon	ENSMUSG00000089876	ProperStrand	4	chr17	24857726	24857806	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-7.6570
chr2	26493467	26493518	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr2	113204319	113204335	protein_coding	Fmn1	exon	ENSMUSG00000044042	ProperStrand	17	1	-8.7294
chr2	179923342	179924055	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	1	-5.2622
chrX	20246316	20259796	protein_coding	Uba1	exon	ENSMUSG00000001924	ProperStrand	156	chr11	69483135	69483209	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	4	-4.6631
chr1	93342189	93345290	protein_coding	Per2	exon	ENSMUSG00000055866	ProperStrand	114	chr18	35714186	35714256	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-2.3130
chr15	59162488	59162568	protein_coding	Sqle	utr3	ENSMUSG00000022351	ProperStrand	19	chr9	15119671	15119761	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	5	-19.2323
chr11	53483155	53483201	protein_coding	Rad50	exon	ENSMUSG00000020380	ProperStrand	61	chr4	131908688	131908722	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-3.7144
chr7	86839763	86839779	protein_coding	5730590G19Rik	exon	ENSMUSG00000046591	NonProperStrand	14	chr17	13112490	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	3	-17.0166
chr9	64985125	64985145	protein_coding	Igdcc4	utr3	ENSMUSG00000032816	ProperStrand	29	chrX	149828130	149828146	protein_coding	Klf8	utr3	ENSMUSG00000041649	NonProperStrand	107	1	-13.6248
chr9	118835822	118835844	protein_coding	Ctdspl	utr5	ENSMUSG00000047409	ProperStrand	8	chr10	110918597	110918700	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-7.4365
chr11	83319944	83319994	protein_coding	Taf15	utr3	ENSMUSG00000020680	ProperStrand	60	chr6	92521101	92521120	protein_coding	Prickle2	intron	ENSMUSG00000030020	ProperStrand	13	1	-16.4107
chr10	126426596	126426676	protein_coding	Ctdsp2	intron	ENSMUSG00000078429	ProperStrand	74	chr7	116663712	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-5.8649
chr2	127405406	127405433	protein_coding	Zfp661	intron	ENSMUSG00000034800	ProperStrand	15	chr7	148634701	148634771	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-6.7080
chr11	79950546	79950563	protein_coding	1110002N22Rik	utr3	ENSMUSG00000046909	ProperStrand	45	chr4	131865867	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.2312
chr8	124407605	124407663	protein_coding	Slc7a5	exon	ENSMUSG00000040010	ProperStrand	166	chr17	56733358	56733397	protein_coding	Safb	exon	ENSMUSG00000071054	ProperStrand	79	2	-16.8841
chr4	43645215	43645285	protein_coding	Npr2	exon	ENSMUSG00000028469	ProperStrand	3	chr7	29136613	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-14.2802
chr14	70256911	70256927	protein_coding	Pebp4	intron	ENSMUSG00000022085	ProperStrand	5	chr15	79912143	79912205	protein_coding	Rpl3	exon	ENSMUSG00000060036	ProperStrand	8342	1	-8.6129
chr2	75888309	75888325	protein_coding	Pde11a	intron	ENSMUSG00000075270	ProperStrand	11	chr11	97642952	97643014	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-9.4094
chr5	42136455	42136473	Low_complexity	GA-rich	Low_complexity	chr5GA-rich42136449	NonProperStrand	106	chr13	100199529	100199546	protein_coding	Mtap1b	exon	ENSMUSG00000052727	NonProperStrand	20	1	-14.3976
chr19	3615718	3615789	protein_coding	Lrp5	exon	ENSMUSG00000024913	ProperStrand	145	chr9	113562325	113562341	protein_coding	Pdcd6ip	utr3	ENSMUSG00000032504	ProperStrand	53	2	-18.2945
chr8	114234630	114234720	protein_coding	Bcar1	utr3	ENSMUSG00000031955	ProperStrand	44	chr4	131908264	131908347	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-3.4538
chr1	193446478	193446498	protein_coding	Ints7	utr3	ENSMUSG00000037461	ProperStrand	108	chr11	69483128	69483194	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.5131
chr9	123045120	123045182	protein_coding	Exosc7	utr3	ENSMUSG00000025785	ProperStrand	17	chr16	23110968	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.8783
chr11	77662970	77663766	protein_coding	Myo18a	exon	ENSMUSG00000000631	ProperStrand	124	chr11	69483136	69483236	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.3156
chr4	136571284	136571319	protein_coding-noncoding	Zbtb40	utr3	ENSMUSG00000060862	ProperStrand	5	chr16	23110828	23110867	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-11.1940
chr6	124761210	124761913	protein_coding	Tpi1	intron	ENSMUSG00000023456	ProperStrand	94	chr11	6428034	6428166	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-6.3856
chr7	87658162	87658207	protein_coding	Blm	exon	ENSMUSG00000030528	ProperStrand	35	chr8	129468787	129468877	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	9	-20.3279
chr11	3548034	3548550	lincRNA	Tug1	intron	ENSMUSG00000056579	ProperStrand	15	chr16	23110829	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-10.9588
chr3	138198870	138198918	protein_coding	Eif4e	intron	ENSMUSG00000028156	ProperStrand	25	chr10	110918600	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-5.1172
chr12	87860539	87860601	protein_coding	Esrrb	utr3	ENSMUSG00000021255	ProperStrand	254	chr3	89254463	89254486	protein_coding	Pbxip1	utr3	ENSMUSG00000042613	ProperStrand	16	2	-20.1100
chr10	5634068	5634084	protein_coding	Esr1	exon	ENSMUSG00000019768	NonProperStrand	24	chr2	26494779	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.8333
chr9	83234199	83234218	LTR	RMER6C	ERVK	chr9RMER6C83234093	ProperStrand	1	chr10	79221582	79221598	protein_coding	Rnf126	utr3	ENSMUSG00000035890	ProperStrand	30	1	-inf
chr1	90998142	90998219	protein_coding	Sh3bp4	intron	ENSMUSG00000036206	NonProperStrand	2	chr18	35716794	35716884	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-9.2832
chr19	56464462	56464479	protein_coding	Nrap	utr5	ENSMUSG00000049134	ProperStrand	32	chr16	23110896	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.9664
chr5	125531369	125531385	protein_coding	Ncor2	exon	ENSMUSG00000029478	ProperStrand	377	chr15	88986307	88986336	protein_coding	Plxnb2	utr3	ENSMUSG00000036606	ProperStrand	119	1	-8.2614
chr7	144432766	144432783	protein_coding	Ebf3	intron	ENSMUSG00000010476	NonProperStrand	8	chr19	8963087	8963187	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-6.1145
chr15	102844825	102844841	protein_coding	Hoxc5	exon	ENSMUSG00000022485	ProperStrand	40	chr17	32457474	32457523	protein_coding	Akap8	intron	ENSMUSG00000024045	ProperStrand	339	1	-10.6610
chr11	112621633	112621650	lincRNA	BC006965	intron	ENSMUSG00000041674	ProperStrand	16	chr17	25512127	25512143	protein_coding	Cacna1h	exon	ENSMUSG00000024112	NonProperStrand	3	1	-inf
chr2	31830106	31832087	protein_coding	Nup214	exon	ENSMUSG00000001855	ProperStrand	62	chr5	74489595	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-3.7170
chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr7	116663634	116663767	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	17	-7.6396
chr19	21910114	21916581	protein_coding	Tmem2	exon	ENSMUSG00000024754	ProperStrand	133	chr9	78215533	78215586	protein_coding	Dppa5a	exon	ENSMUSG00000060461	ProperStrand	79	1	-11.1623
chr7	58328857	58328874	LTR	MTE-int	MaLR	chr7MTE-int58328849	ProperStrand	1	chr18	75274612	75278805	protein_coding	Dym	exon	ENSMUSG00000035765	ProperStrand	22	1	-inf
chr7	92097232	92097252	protein_coding	Vmn2r65	intron	ENSMUSG00000066372	ProperStrand	4	chr2	155900004	155901977	protein_coding	Cpne1	exon	ENSMUSG00000074643	ProperStrand	10	1	-19.3291
chr11	70465587	70465668	protein_coding	Pfn1	utr3	ENSMUSG00000018293	ProperStrand	55	chr2	70378840	70378858	protein_coding	4933404M02Rik	exon	ENSMUSG00000075302	ProperStrand	3	1	-19.2805
chr4	135895531	135895631	protein_coding	Hnrnpr	exon	ENSMUSG00000066037	ProperStrand	15	chr2	26493366	26493420	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-6.4501
chr8	90674243	90680425	protein_coding	Heatr3	exon	ENSMUSG00000031657	ProperStrand	24	chr2	26494761	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-8.0332
chr9	30985490	30985580	protein_coding	Aplp2	exon	ENSMUSG00000031996	ProperStrand	172	chr16	23110460	23110540	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-0.9010
chr14	56213913	56214013	protein_coding	Rnf31	utr5	ENSMUSG00000047098	ProperStrand	17	chr16	23111451	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.3471
chr2	90235292	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	38059480	38059498	LTR	IAPEY_LTR	ERVK	chr4IAPEY_LTR38059187	NonProperStrand	1	1	-inf
chr9	82807319	82807384	protein_coding	Phip	exon	ENSMUSG00000032253	ProperStrand	43	chr16	17210492	17210512	protein_coding	Rimbp3	exon	ENSMUSG00000071636	ProperStrand	67	1	-13.7636
chrX	17828120	17828187	protein_coding	Kdm6a	exon	ENSMUSG00000037369	NonProperStrand	3	chr1	162967510	162967566	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	NonProperStrand	5	1	-inf
chr8	40681587	40681603	protein_coding	Msr1	intron	ENSMUSG00000025044	ProperStrand	138	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-3.6293
chr10	6450631	6450649	protein_coding	Plekhg1	intron	ENSMUSG00000040624	NonProperStrand	75	chr11	106362638	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-6.9607
chr11	16404770	16404810	protein_coding	Sec61g	exon	ENSMUSG00000078974	ProperStrand	10	chr4	131908232	131908332	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.5892
chr11	100343015	100380416	protein_coding	Acly	exon	ENSMUSG00000020917	ProperStrand	183	chr9	15119631	15119736	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-1.8815
chr9	40611705	40611752	snoRNA	ENSMUSG00000075876_Snord14c	.	ENSMUSG00000075876	ProperStrand	104	chr16	43886888	43886927	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	2	-11.2279
chr10	95011768	95011858	protein_coding	Nudt4	utr3	ENSMUSG00000020029	ProperStrand	32	chr4	131908728	131908808	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.1812
chr4	56910496	56910615	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	chr19	44188489	44188515	snoRNA	ENSMUSG00000077391_SNORA12	.	ENSMUSG00000077391	ProperStrand	506	1	-2.1592
chr4	43505656	43505682	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chrX	148461236	148462259	protein_coding	Smc1a	exon	ENSMUSG00000041133	ProperStrand	104	1	-2.1243
chr12	17793300	17793348	protein_coding	Hpcal1	exon	ENSMUSG00000071379	ProperStrand	51	chr7	52382804	52382832	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-7.0750
chr6	128453550	128453640	protein_coding	Pzp	exon	ENSMUSG00000030359	NonProperStrand	4	chr9	15119636	15119716	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-8.0470
chr3	157718704	157721637	protein_coding	Lrrc40	exon	ENSMUSG00000063052	ProperStrand	147	chr6	87962384	87963668	protein_coding	Rab7	exon	ENSMUSG00000079477	ProperStrand	33	1	-12.7219
chr12	86684046	86684132	protein_coding	Tmed10	utr3	ENSMUSG00000021248	ProperStrand	34	chr2	145077956	145209256	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	4	-20.2684
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	96635806	96638294	protein_coding	Snx11	utr5	ENSMUSG00000020876	NonProperStrand	24	1	-6.2570
chr14	56069291	56069340	LTR	RMER5	ERV1	chr14RMER556068959	ProperStrand	1	chr7	116663633	116663715	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-inf
chr14	30123183	30123223	protein_coding	Cacna2d3	intron	ENSMUSG00000021991	NonProperStrand	26	chr9	44166293	44166393	protein_coding	Vps11	exon	ENSMUSG00000032127	ProperStrand	19	1	-17.3157
chr17	35294470	35294870	protein_coding	Prrc2a	exon	ENSMUSG00000024393	ProperStrand	315	chr14	33005145	33005235	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-1.2175
chr2	145077958	145209256	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	chr17	35384118	35384195	snoRNA	ENSMUSG00000065273_SNORD83	.	ENSMUSG00000065273	ProperStrand	244	3	-11.6803
chr11	78128780	78129088	protein_coding	Spag5	exon	ENSMUSG00000002055	ProperStrand	49	chr3	95980285	95980365	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-7.2606
chrX	71485350	71485572	protein_coding	Flna	exon	ENSMUSG00000031328	ProperStrand	134	chr11	97642956	97643025	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.2268
chr3	33041921	33041939	protein_coding	Pex5l	utr5	ENSMUSG00000027674	ProperStrand	52	chr17	35299507	35299641	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	7	-20.4031
chr7	111902023	111902044	LTR	RLTR9A	ERVK	chr7RLTR9A111902013	NonProperStrand	2	chr17	24856708	24856801	antisense	Snhg9	.	ENSMUSG00000090101	ProperStrand	218	2	-inf
chr7	134921702	134921744	protein_coding	Setd1a	exon	ENSMUSG00000042308	NonProperStrand	5	chr7	106631348	106631442	snoRNA	ENSMUSG00000065822_Snord15a	.	ENSMUSG00000065822	NonProperStrand	1	1	-inf
chr13	17819039	17819116	protein_coding	Cdk13	intron	ENSMUSG00000041297	ProperStrand	29	chr1	162966830	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-7.7094
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	103588240	103588355	protein_coding	Nat10	exon	ENSMUSG00000027185	NonProperStrand	64	1	-4.3396
chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr1	173433177	173433235	protein_coding	B930036N10Rik	utr3	ENSMUSG00000091993	ProperStrand	150	1	-1.9970
chr13	19194747	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	chr16	11139249	11140890	protein_coding	Zc3h7a	exon	ENSMUSG00000037965	ProperStrand	249	1	-7.6331
chr2	137626465	137626555	lincRNA	Gm14064	intron	ENSMUSG00000085640	NonProperStrand	4	chr13	108970111	108970191	protein_coding	Ercc8	intron	ENSMUSG00000021694	NonProperStrand	1	1	-inf
chr14	47118754	47118844	LINE	Lx7	L1	chr14Lx747118662	ProperStrand	1	chr14	47119470	47119550	LTR	ORR1C2	MaLR	chr14ORR1C247119465	NonProperStrand	1	1	-inf
chr9	57378059	57378106	protein_coding	Cox5a	exon	ENSMUSG00000000088	ProperStrand	26	chr3	121426639	121426655	protein_coding	F3	exon	ENSMUSG00000028128	NonProperStrand	4	1	-19.7365
chr2	125389949	125389966	protein_coding	Cep152	exon	ENSMUSG00000068394	ProperStrand	60	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-5.0143
chr1	187234075	187235051	protein_coding	Eprs	exon	ENSMUSG00000026615	ProperStrand	149	chr7	150717298	150717350	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-3.7688
chr10	44817264	44827611	protein_coding	Prep	exon	ENSMUSG00000019849	ProperStrand	21	chr9	15119646	15119726	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.5745
chr19	30213853	30217932	protein_coding	Gldc	exon	ENSMUSG00000024827	ProperStrand	175	chr9	64022891	64022921	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-5.9065
chr17	37147248	37147283	protein_coding	Zfp57	exon	ENSMUSG00000036036	ProperStrand	39	chrX	71517838	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-7.4034
chr2	157282821	157282935	protein_coding	Src	exon	ENSMUSG00000027646	ProperStrand	32	chr4	131908688	131908722	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.1812
chr13	38071468	38071500	protein_coding	Ssr1	utr3	ENSMUSG00000021427	ProperStrand	65	chr8	129468747	129468869	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-4.2614
chr8	114235293	114237247	protein_coding	Bcar1	exon	ENSMUSG00000031955	ProperStrand	44	chr7	116664858	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.0957
chr8	87340233	87340249	protein_coding	Dand5	exon	ENSMUSG00000053226	ProperStrand	34	chr9	15119650	15119726	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.6547
chr5	135886166	135886247	protein_coding	Hip1	utr3	ENSMUSG00000039959	ProperStrand	30	chr19	8798738	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-6.1598
chr2	59176781	59176869	protein_coding	Pkp4	exon	ENSMUSG00000026991	ProperStrand	33	chr10	23505164	23505254	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.1417
chr7	26099937	26099953	protein_coding	Tmem145	intron	ENSMUSG00000043843	ProperStrand	24	chr16	23110827	23110851	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.3518
chr1	72272872	72272952	snRNA	ENSMUSG00000075752_U2	.	ENSMUSG00000075752	ProperStrand	535	chr16	38158128	38158218	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	1	-4.3587
chr18	83162489	83162579	protein_coding	Zfp516	exon	ENSMUSG00000058881	ProperStrand	25	chr4	131908816	131908906	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.6029
chr7	52558755	52558838	protein_coding	Trpm4	utr3	ENSMUSG00000038260	ProperStrand	161	chr2	87802622	87802639	protein_coding	Olfr1157	exon	ENSMUSG00000075143	NonProperStrand	49	1	-11.7411
chr15	31224971	31224989	protein_coding	Ankrd33b	utr3	ENSMUSG00000022237	ProperStrand	55	chr5	111121080	111121123	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-6.6067
chr14	71065339	71065355	protein_coding	Xpo7	utr3	ENSMUSG00000022100	ProperStrand	109	chr19	8963118	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.3503
chr7	50784354	50784372	protein_coding	Cd33	exon	ENSMUSG00000004609	ProperStrand	23	chr1	36284445	36291654	protein_coding	Uggt1	exon	ENSMUSG00000037470	ProperStrand	67	2	-19.0058
chr8	73419308	73419710	protein_coding	Rpl18a	intron	ENSMUSG00000045128	ProperStrand	394	chr8	129468751	129468827	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	5	-7.0291
chr12	110796460	110809620	lincRNA	Meg3	exon	ENSMUSG00000021268	ProperStrand	61	chr2	128846392	128846417	processed_transcript	Gm14027	.	ENSMUSG00000090248	ProperStrand	1	1	-inf
chr4	21833727	21833746	protein_coding	Coq3	intron	ENSMUSG00000028247	ProperStrand	10	chr19	8800354	8800478	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	6	-inf
chr4	33297359	33297378	protein_coding	Srsf12	intron	ENSMUSG00000054679	ProperStrand	1	chr3	123210892	123210971	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	NonProperStrand	45	1	-inf
chr18	35716671	35716761	lincRNA	Snhg4	intron	ENSMUSG00000090430	ProperStrand	270	chr7	148634725	148634805	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-2.6828
chr17	26783462	26783535	protein_coding	Ergic1	intron	ENSMUSG00000001576	ProperStrand	114	chr1	63225690	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	3	-12.5912
chr13	54564913	54564929	protein_coding	Thoc3	exon	ENSMUSG00000025872	ProperStrand	24	chr2	104687202	104687274	protein_coding	Prrg4	intron	ENSMUSG00000027171	ProperStrand	6	1	-18.9230
chr7	53310038	53311988	protein_coding	Nomo1	exon	ENSMUSG00000030835	ProperStrand	85	chr7	133972933	133972949	protein_coding	Fam57b	exon	ENSMUSG00000058966	NonProperStrand	12	1	-15.8786
chr6	29484550	29484570	protein_coding	Irf5	exon	ENSMUSG00000029771	ProperStrand	2	chr9	65044377	65044447	snRNA	ENSMUSG00000075763_U5	.	ENSMUSG00000075763	ProperStrand	216	1	-18.2538
chr1	174210708	174210725	protein_coding	Igsf8	intron	ENSMUSG00000038034	ProperStrand	25	chr11	69483136	69483211	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.0393
chr1	158233449	158233479	lincRNA	Tdrd5	exon	ENSMUSG00000060985	ProperStrand	7	chr6	145564547	145564563	protein_coding	Tuba3b	utr5	ENSMUSG00000067338	ProperStrand	152	1	-15.8799
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr17	27236036	27236052	protein_coding	Itpr3	exon	ENSMUSG00000042644	ProperStrand	137	1	-4.3075
chr16	57391626	57391677	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr2	26494708	26494805	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	NonProperStrand	27	2	-18.4961
chr17	46849147	46849165	protein_coding	Pex6	exon	ENSMUSG00000002763	NonProperStrand	1	chr10	90432659	90432680	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	1	-inf
chr1	63223715	63223784	protein_coding	Eef1b2	utr5	ENSMUSG00000025967	ProperStrand	106	chr4	131865855	131865901	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-4.5483
chr11	3426352	3426368	protein_coding	Smtn	exon	ENSMUSG00000020439	ProperStrand	222	chr2	26768383	26768431	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-3.1304
chr19	4623835	4624041	protein_coding	Rce1	exon	ENSMUSG00000024889	ProperStrand	11	chr11	97643011	97643091	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-5.6855
chr6	82676785	82676822	protein_coding	Hk2	utr3	ENSMUSG00000000628	ProperStrand	88	chr18	35716683	35716761	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-6.3874
chr12	77200288	77200304	protein_coding	Syne2	exon	ENSMUSG00000063450	ProperStrand	63	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.1878
chr1	174123979	174124721	protein_coding	Dcaf8	exon	ENSMUSG00000026554	ProperStrand	35	chr9	75065970	75065993	protein_coding	Myo5a	utr3	ENSMUSG00000034593	ProperStrand	89	1	-13.6118
chrX	45627282	45627302	protein_coding	Utp14a	intron	ENSMUSG00000063785	ProperStrand	22	chr16	23110912	23111011	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.8207
chr9	61761164	61761249	protein_coding	Rplp1	exon	ENSMUSG00000007892	ProperStrand	116	chr9	120037908	120038037	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	2	-5.8969
chr19	10630201	10630217	protein_coding	Tmem216	utr5	ENSMUSG00000024667	ProperStrand	27	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.7840
chr2	127055900	127055918	protein_coding	Snrnp200	exon	ENSMUSG00000003660	NonProperStrand	6	chr7	116663695	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-7.0045
chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr15	5068407	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	11	-0.7052
chr5	123191333	123191349	protein_coding	Camkk2	intron	ENSMUSG00000029471	ProperStrand	35	chr8	12757419	12757437	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-9.6778
chr8	4521211	4521266	protein_coding	Lass4	exon	ENSMUSG00000008206	ProperStrand	6	chr16	23110921	23110980	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.7876
chr7	133940853	133940929	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	chr15	78982035	78982051	protein_coding	Polr2f	exon	ENSMUSG00000033020	NonProperStrand	71	1	-8.0039
mmu-miR-1949	6	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr7	142888588	142888691	protein_coding	Mki67	exon	ENSMUSG00000031004	ProperStrand	286	1	-5.0733
chr2	101739046	101740071	protein_coding	Commd9	exon	ENSMUSG00000027163	ProperStrand	4	chr3	54043714	54043730	protein_coding	Trpc4	intron	ENSMUSG00000027748	NonProperStrand	4	1	-inf
chr13	23831132	23831222	protein_coding	Hist1h1c	exon	ENSMUSG00000036181	ProperStrand	99	chr11	97642994	97643074	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.6620
chr14	77424372	77424388	protein_coding	9030625A04Rik	utr3	ENSMUSG00000044350	NonProperStrand	152	chr3	123210941	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-0.7690
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr17	24856620	24856687	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-2.2175
chr1	152268927	152269668	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	chr2	130101884	130102204	protein_coding	Nop56	exon	ENSMUSG00000027405	ProperStrand	125	1	-7.4435
chr17	75578474	75578491	protein_coding	Ltbp1	exon	ENSMUSG00000001870	ProperStrand	136	chr10	110918549	110918667	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	8	-17.7495
chr8	113578057	113578425	protein_coding	Aars	exon	ENSMUSG00000031960	ProperStrand	355	chr15	98350146	98350183	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	2	-3.0047
chr5	38625279	38625328	protein_coding	Lyar	exon	ENSMUSG00000067367	ProperStrand	33	chr9	56105822	56105912	protein_coding	C230081A13Rik	exon	ENSMUSG00000074305	ProperStrand	40	8	-19.8823
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	68147977	68147993	LINE	Lx3_Mus	L1	chr7Lx3_Mus68146918	ProperStrand	9	1	-8.2671
chr15	76006435	76006456	protein_coding	Plec	exon	ENSMUSG00000022565	ProperStrand	186	chr2	130484597	130484613	protein_coding	Ddrgk1	intron	ENSMUSG00000068290	ProperStrand	43	1	-11.7161
chr16	37822755	37822772	protein_coding	Fstl1	exon	ENSMUSG00000022816	ProperStrand	179	chr7	38258429	38258512	protein_coding	Zfp536	intron	ENSMUSG00000043456	NonProperStrand	236	1	-8.3796
chr6	131330325	131330425	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	ProperStrand	408	chr11	6520321	6520387	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	9	-20.4214
chr19	6248245	6248262	protein_coding	Atg2a	exon	ENSMUSG00000024773	NonProperStrand	9	chr15	89011116	89011133	protein_coding	Plxnb2	utr5	ENSMUSG00000036606	NonProperStrand	11	1	-19.2632
chr18	75528883	75528914	protein_coding	Smad7	exon	ENSMUSG00000025880	ProperStrand	83	chr7	116663646	116663767	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	8	-17.6189
chr7	25256846	25256936	protein_coding	Plaur	intron	ENSMUSG00000046223	ProperStrand	5	chr19	8800377	8800457	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-8.5453
chr2	83693562	83693578	protein_coding	Fam171b	exon	ENSMUSG00000048388	NonProperStrand	175	chr17	35299565	35299642	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-2.7962
chr1	169156420	169156510	protein_coding	Uck2	utr3	ENSMUSG00000026558	ProperStrand	45	chr7	150717335	150717415	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-6.0723
chr2	129025657	129025747	protein_coding	Slc20a1	exon	ENSMUSG00000027397	ProperStrand	81	chr7	116663666	116663746	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.0123
chr7	13511140	13511177	protein_coding	Rps5	exon	ENSMUSG00000012848	ProperStrand	108	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.5422
chr9	123371290	123371308	protein_coding	Lars2	utr3	ENSMUSG00000035202	ProperStrand	11	chr12	112779229	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-8.1733
chr6	124697158	124697174	protein_coding	Atn1	exon	ENSMUSG00000004263	NonProperStrand	3	chr1	127331910	127331926	protein_coding	Actr3	utr5	ENSMUSG00000026341	ProperStrand	45	1	-inf
chr4	106712609	106718940	protein_coding	Ssbp3	exon	ENSMUSG00000061887	ProperStrand	36	chr19	8798757	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-5.7984
chr4	140551528	140552218	protein_coding	Atp13a2	exon	ENSMUSG00000036622	ProperStrand	39	chr1	102076758	102076790	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	1	-10.3031
chr2	87802622	87802639	protein_coding	Olfr1157	exon	ENSMUSG00000075143	NonProperStrand	49	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-5.5957
chr6	31460975	31461102	protein_coding	Mkln1	utr3	ENSMUSG00000025609	ProperStrand	18	chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	2	-14.1500
chrX	126011781	126011871	LINE	L2a	L2	chrXL2a126011802	NonProperStrand	1	chrX	122884699	122884789	LINE	Lx	L1	chrXLx122884536	NonProperStrand	1	1	-inf
chr13	51743665	51743703	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	chr2	166890503	166890575	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-1.5881
chr2	25421638	25421655	protein_coding	Mamdc4	exon	ENSMUSG00000026941	ProperStrand	11	chr5	22252568	22252584	protein_coding	Lhfpl3	intron	ENSMUSG00000058361	ProperStrand	14	1	-inf
chr18	36961598	36961664	misc_RNA	Vault	.	ENSMUSG00000065145	ProperStrand	177	chr4	132394377	132394461	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	1	-6.9822
chr2	26493364	26493464	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr2	158184091	158184137	snoRNA	ENSMUSG00000064995_SNORA71	.	ENSMUSG00000064995	ProperStrand	430	5	-4.8552
chrX	160396313	160396329	protein_coding	Zrsr2	utr5	ENSMUSG00000031370	ProperStrand	57	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-10.5314
chr4	79649326	79649370	pseudogene	Gm11408	.	ENSMUSG00000083076	NonProperStrand	13	chr16	23110909	23110980	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.3283
chr14	21603796	21603905	protein_coding	Camk2g	intron	ENSMUSG00000021820	ProperStrand	24	chr17	13112566	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-6.3779
chr10	112426942	112426960	SINE	B3A	B2	chr10B3A112426883	ProperStrand	1	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-inf
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr11	57873866	57873903	protein_coding	Larp1	utr3	ENSMUSG00000037331	ProperStrand	201	1	-4.5653
chr11	93816909	93816956	protein_coding	Nme2	utr5	ENSMUSG00000020857	ProperStrand	8	chr6	124691241	124691277	protein_coding	Grcc10	utr5	ENSMUSG00000072772	ProperStrand	88	1	-16.5839
chr12	68768749	68768829	LINE	L1Md_F2	L1	chr12L1Md_F268768613	NonProperStrand	12	chr7	54441672	54441762	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	1	-14.8797
chr17	25153673	25235916	protein_coding	Ift140	utr3	ENSMUSG00000024169	ProperStrand	25	chr16	23110841	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-7.7471
chr3	94973223	94973240	protein_coding	Sema6c	exon	ENSMUSG00000038777	ProperStrand	30	chr11	69481328	69481463	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-4.4996
chr15	9001466	9001494	protein_coding	1110020G09Rik	exon	ENSMUSG00000022253	ProperStrand	15	chr6	128010926	128010944	protein_coding	Tspan9	intron	ENSMUSG00000030352	ProperStrand	67	1	-15.9020
chr6	107294843	107294860	LINE	Lx	L1	chr6Lx107294817	NonProperStrand	1	chr18	10052131	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	1	-inf
chr4	140258061	140261723	protein_coding	Rcc2	intron	ENSMUSG00000040945	ProperStrand	228	chr10	23505152	23505282	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	9	-4.7589
chr1	57425979	57425997	lincRNA	4930558J18Rik	intron	ENSMUSG00000084958	NonProperStrand	28	chr9	15120906	15120935	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	1	-11.2469
chr7	130634827	130634917	protein_coding	Zkscan2	intron	ENSMUSG00000030757	ProperStrand	2	chr7	129435301	129435391	protein_coding	Prkcb	intron	ENSMUSG00000052889	ProperStrand	16	1	-inf
chr4	140758292	140758309	protein_coding	Fbxo42	utr3	ENSMUSG00000028920	NonProperStrand	4	chr18	35714144	35714260	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-8.9582
chr11	87797505	87800829	protein_coding	Dynll2	utr5	ENSMUSG00000020483	ProperStrand	22	chr17	6138911	6138928	protein_coding	Tulp4	exon	ENSMUSG00000034377	ProperStrand	164	2	-19.9135
chr8	11678651	11678668	protein_coding	1700016D06Rik	exon	ENSMUSG00000031509	ProperStrand	7	chr3	153575092	153575117	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	1	-12.9174
chr5	139495009	139495026	protein_coding	Prkar1b	intron	ENSMUSG00000025855	NonProperStrand	5	chr18	75160711	75160740	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	1	-14.3502
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr4	124723595	124724757	protein_coding	Gnl2	exon	ENSMUSG00000028869	ProperStrand	23	1	-8.8513
chr19	6298519	6298609	protein_coding	Ehd1	utr3	ENSMUSG00000024772	ProperStrand	30	chr18	35714145	35714225	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.7548
chr11	66204284	66204301	protein_coding	Shisa6	intron	ENSMUSG00000053930	ProperStrand	23	chr2	32818886	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-7.3770
chr14	119378289	119378347	protein_coding	Dnajc3	utr3	ENSMUSG00000022136	ProperStrand	10	chr1	174051841	174051915	protein_coding	Copa	utr3	ENSMUSG00000026553	ProperStrand	33	1	-17.7643
chr5	122318609	122319065	protein_coding	Cux2	exon	ENSMUSG00000042589	ProperStrand	8	chr7	122615734	122615751	protein_coding	Sox6	utr3	ENSMUSG00000051910	ProperStrand	18	1	-18.6388
chr4	108278918	108278934	protein_coding	Orc1	exon	ENSMUSG00000028587	ProperStrand	161	chr2	91436269	91436336	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-5.5505
chr15	96406200	96406230	protein_coding	Slc38a1	utr3	ENSMUSG00000023169	ProperStrand	69	chr11	69481333	69481378	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-5.1090
chr4	118951585	118951675	protein_coding	Ybx1	exon	ENSMUSG00000028639	ProperStrand	171	chr17	35299521	35299601	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-2.8367
chr11	4915690	4916654	protein_coding	Ap1b1	exon	ENSMUSG00000009090	ProperStrand	43	chr7	52381973	52382012	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-7.3754
chr6	124350871	124350888	protein_coding	Pex5	intron	ENSMUSG00000005069	ProperStrand	27	chr19	8799581	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-8.3666
chr4	43505656	43505720	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr12	110889637	110889701	snoRNA	ENSMUSG00000064496_SNORD113	.	ENSMUSG00000064496	ProperStrand	37	2	-6.6837
chr18	28982220	28982300	LINE	L1Md_F2	L1	chr18L1Md_F228981896	ProperStrand	1	chr3	15375478	15375568	protein_coding	Sirpb1a	intron	ENSMUSG00000044138	NonProperStrand	1	1	-inf
chr2	79132657	79132674	protein_coding-noncoding	Itga4	utr5	ENSMUSG00000027009	NonProperStrand	118	chr16	23111780	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-0.9449
chr3	82875195	82875215	protein_coding	Plrg1	exon	ENSMUSG00000027998	ProperStrand	16	chr3	133151038	133151054	protein_coding	Tet2	exon	ENSMUSG00000040943	NonProperStrand	7	1	-inf
chr13	55103835	55103851	protein_coding	Unc5a	exon	ENSMUSG00000025876	NonProperStrand	96	chrX	71517906	71517956	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-5.6210
chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	chr9	44773579	44773605	protein_coding	Ube4a	utr5	ENSMUSG00000059890	ProperStrand	12	1	-12.1089
chr14	32479927	32479943	protein_coding	Btd	exon	ENSMUSG00000021900	NonProperStrand	74	chr1	162965529	162965596	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.8998
chr11	82704043	82704060	protein_coding	Rad51l3	utr5	ENSMUSG00000018841	NonProperStrand	1	chr11	69483216	69483268	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-inf
chr15	73125789	73127044	protein_coding	Ptk2	exon	ENSMUSG00000022607	ProperStrand	31	chr4	131865381	131865449	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	3	-12.4163
chr10	94956285	94956329	protein_coding	Mrpl42	exon	ENSMUSG00000062981	ProperStrand	9	chr17	35299538	35299599	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-8.5954
chr8	122129037	122129054	protein_coding	Taf1c	utr5	ENSMUSG00000031832	ProperStrand	26	chr15	79913286	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-8.5710
chr5	140857296	140857313	protein_coding	Snx8	intron	ENSMUSG00000029560	ProperStrand	106	chr12	17553014	17553052	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-4.0023
chr1	187149387	187149440	protein_coding	Iars2	exon	ENSMUSG00000026618	ProperStrand	68	chr5	130300487	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.2975
chr4	108333291	108347108	protein_coding	Zfyve9	exon	ENSMUSG00000034557	ProperStrand	14	chr1	39605591	39605681	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-10.2932
chr11	62416575	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	chr4	116827122	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	3	-1.3430
mmu-miR-6240	1	23	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr9	28933593	28933613	protein_coding	Ntm	intron	ENSMUSG00000059974	ProperStrand	49	1	-6.3032
chr17	31984054	31984144	protein_coding	Sik1	exon	ENSMUSG00000024042	ProperStrand	55	chr16	23111728	23111808	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-7.7931
chr1	58652428	58652487	protein_coding	Ndufb3	intron	ENSMUSG00000026032	ProperStrand	14	chr1	162967515	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	4	-inf
chr16	22383227	22411843	protein_coding	Etv5	exon	ENSMUSG00000013089	ProperStrand	88	chr4	131908689	131908737	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-1.5523
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr13	44991681	44991705	protein_coding	Jarid2	exon	ENSMUSG00000038518	ProperStrand	372	1	-4.4028
chr10	39978378	39978478	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	chr9	15118563	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	2	-3.3911
chr17	88374530	88385341	protein_coding	Msh6	exon	ENSMUSG00000005370	ProperStrand	150	chr16	23111695	23111786	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	5	-4.8636
chr5	147646411	147646460	snoRNA	ENSMUSG00000077185_SNORD102	.	ENSMUSG00000077185	ProperStrand	142	chr5	74489618	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-2.2502
chr3	152565088	152565104	protein_coding	St6galnac5	intron	ENSMUSG00000039037	ProperStrand	4	chr16	34549713	34549731	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-17.4456
chr1	36748510	36749297	protein_coding	Cox5b	exon	ENSMUSG00000061518	ProperStrand	43	chr4	131865909	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.3073
chr4	91012543	91012564	protein_coding	Elavl2	intron	ENSMUSG00000008489	ProperStrand	52	chr17	27559700	27559717	protein_coding	Grm4	utr3	ENSMUSG00000063239	ProperStrand	147	1	-11.8037
chr9	57454904	57454921	protein_coding	Lman1l	utr3	ENSMUSG00000056271	ProperStrand	3	chr7	116664804	116664864	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-8.6415
chr16	85802546	85802564	protein_coding	Adamts1	exon	ENSMUSG00000022893	ProperStrand	102	chr8	113362430	113362488	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	1	-8.2038
chr17	29834989	29835603	protein_coding	Ftsjd2	exon	ENSMUSG00000024019	ProperStrand	31	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-10.7017
chr19	4194582	4194685	protein_coding	Ppp1ca	exon	ENSMUSG00000040385	ProperStrand	40	chr5	108334195	108334314	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	3	-13.0668
chrX	45475092	45475110	protein_coding	Xpnpep2	exon	ENSMUSG00000037005	ProperStrand	32	chrX	34622906	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	10	-19.6182
chr15	25685955	25686000	protein_coding	Myo10	intron	ENSMUSG00000022272	ProperStrand	168	chr17	33954139	33954158	protein_coding	Kank3	exon	ENSMUSG00000042099	ProperStrand	64	1	-11.1175
chr11	62964660	62964715	protein_coding	Pmp22	exon	ENSMUSG00000018217	ProperStrand	5	chr12	112779223	112779240	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	5	-inf
chr8	125418802	125418819	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	chr19	8963027	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-0.7976
chr12	110888850	110888909	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	1	-1.6948
chr12	20240169	20240190	LTR	MMERGLN-int	ERV1	chr12MMERGLN-int20232758	NonProperStrand	3	chr1	72881931	72882034	protein_coding	Igfbp2	intron	ENSMUSG00000039323	ProperStrand	406	1	-15.8530
chr16	23107544	23107560	protein_coding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	356	chr9	94742324	94742340	protein_coding	Slc9a9	intron	ENSMUSG00000031129	NonProperStrand	7	1	-14.1770
chr10	120288388	120288407	protein_coding	Msrb3	intron	ENSMUSG00000051236	ProperStrand	24	chr11	106362637	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-9.2486
chr4	118955407	118955458	protein_coding	Ybx1	exon	ENSMUSG00000028639	ProperStrand	171	chr14	76247754	76247816	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-2.2916
chr16	17263245	17263326	protein_coding	Hic2	utr3	ENSMUSG00000050240	ProperStrand	36	chr14	33005084	33005174	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-4.9721
chr7	130465170	130465423	protein_coding	Arhgap17	exon	ENSMUSG00000030766	ProperStrand	7	chr3	94894545	94894622	snoRNA	ENSMUSG00000064952_SNORD62	.	ENSMUSG00000064952	ProperStrand	75	1	-17.3159
chr2	119273956	119275751	protein_coding	Ino80	exon	ENSMUSG00000034154	ProperStrand	54	chr17	24857815	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.4751
chr6	119768251	119768334	protein_coding	Erc1	intron	ENSMUSG00000030172	ProperStrand	69	chr3	123210895	123210985	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.8430
chr10	81056885	81056901	protein_coding	Tle6	exon	ENSMUSG00000034758	ProperStrand	10	chr17	23958299	23958349	protein_coding	Srrm2	utr3	ENSMUSG00000039218	ProperStrand	521	1	-12.6503
chr15	37975450	38008385	protein_coding	Ubr5	exon	ENSMUSG00000037487	ProperStrand	258	chr10	23505152	23505254	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-1.1517
chr3	129238442	129238460	protein_coding	Elovl6	intron	ENSMUSG00000041220	ProperStrand	59	chr18	35714162	35714253	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-3.4737
chr10	79879961	79880064	protein_coding	Tcf3	exon	ENSMUSG00000020167	NonProperStrand	24	chr7	104629625	104629641	protein_coding	Ints4	exon	ENSMUSG00000025133	ProperStrand	19	1	-17.3644
chr2	13192640	13192851	protein_coding	Rsu1	utr5	ENSMUSG00000026727	ProperStrand	13	chr17	24665449	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-7.9975
chr14	118776719	118776736	lincRNA	Gm17668	intron	ENSMUSG00000091690	NonProperStrand	8	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-12.7259
chr11	77995189	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	chr17	24856697	24856750	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	2	-1.0529
chr1	145601663	145601702	protein_coding	Trove2	utr3	ENSMUSG00000018199	ProperStrand	4	chr16	23111414	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-10.7545
chrX	133268717	133268799	protein_coding	Morf4l2	exon	ENSMUSG00000031422	ProperStrand	113	chr1	162965560	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.1758
chr17	35280391	35280478	protein_coding	Bag6	exon	ENSMUSG00000024392	NonProperStrand	4	chr4	45057652	45057706	protein_coding	Fbxo10	exon	ENSMUSG00000048232	NonProperStrand	2	1	-inf
chr8	98270005	98270085	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	chr15	98356816	98356906	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	1	-0.8266
chr12	111932460	111932505	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr3	89827378	89827405	protein_coding	Ubap2l	exon	ENSMUSG00000042520	ProperStrand	88	1	-7.4953
chr7	19479190	19479291	protein_coding	Ccdc61	exon	ENSMUSG00000074358	ProperStrand	27	chr19	8798484	8798555	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-6.7897
chr1	74482471	74482561	protein_coding	Usp37	utr3	ENSMUSG00000033364	ProperStrand	47	chr9	15119648	15119728	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.0610
chr5	64872082	64872148	LTR	RMER6A	ERVK	chr5RMER6A64871409	NonProperStrand	2	chr18	73693116	73693137	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	2	-inf
chr15	101926025	101926043	protein_coding	Eif4b	utr3	ENSMUSG00000058655	ProperStrand	484	chr18	35714167	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-0.9405
chr1	185860748	185860764	protein_coding	Dusp10	exon	ENSMUSG00000039384	ProperStrand	4	chr10	23505155	23505255	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-6.2798
chr2	90235290	90235341	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	120084432	120084509	protein_coding	Mobp	utr3	ENSMUSG00000032517	ProperStrand	2	1	-11.8388
chr2	28534559	28534668	protein_coding	Tsc1	intron	ENSMUSG00000026812	ProperStrand	29	chr10	110918654	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	3	-11.5182
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr2	26768058	26768119	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	2	-5.1939
chr17	46285129	46285145	protein_coding	Mad2l1bp	exon	ENSMUSG00000034509	NonProperStrand	67	chr7	29136555	29136599	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.1807
chr8	97656084	97656184	protein_coding	Kifc3	intron	ENSMUSG00000031788	ProperStrand	13	chr16	23110528	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.3353
chr6	8343606	8343623	protein_coding	Gm16039	intron	ENSMUSG00000089862	NonProperStrand	11	chr11	62416951	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-9.4760
chr19	4446387	4446477	lincRNA	A930001C03Rik	intron	ENSMUSG00000087132	ProperStrand	6	chr11	69248088	69248178	protein_coding	Dnahc2	intron	ENSMUSG00000005237	NonProperStrand	6	1	-18.9143
chr5	111084890	111085124	protein_coding	Ddx51	exon	ENSMUSG00000029504	ProperStrand	54	chr4	131908687	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.3702
chr2	164597420	164597510	protein_coding	Ube2c	exon	ENSMUSG00000001403	ProperStrand	40	chr3	123210905	123210985	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.7541
chr16	15903146	15904212	protein_coding	2310008H04Rik	exon	ENSMUSG00000041974	ProperStrand	30	chr4	131908236	131908272	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.5256
chr13	19684241	19684258	protein_coding	Epdr1	utr3	ENSMUSG00000002808	ProperStrand	46	chr4	108614561	108614577	protein_coding	Rab3b	utr3	ENSMUSG00000003411	ProperStrand	5	1	-18.6318
chr4	131908856	131908898	lincRNA	Gm17300	exon	ENSMUSG00000091021	ProperStrand	109	chr11	69483183	69483283	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	NonProperStrand	35	1	-13.2043
chr4	104517490	104517580	protein_coding	C8a	intron	ENSMUSG00000035031	NonProperStrand	1	chr4	104547216	104547296	protein_coding	C8a	intron	ENSMUSG00000035031	ProperStrand	1	1	-inf
chr4	116826698	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	chr1	88247741	88247828	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	6	-3.3157
chr17	36118556	36119490	protein_coding	Gnl1	exon	ENSMUSG00000024429	ProperStrand	70	chr4	131908356	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-3.7131
chr18	3383336	3383391	protein_coding	Cul2	utr5	ENSMUSG00000024231	ProperStrand	16	chr7	52382752	52382834	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-9.4190
chr9	118976668	118977524	protein_coding	Vill	exon	ENSMUSG00000038775	ProperStrand	4	chr2	179759918	179759941	protein_coding	Lsm14b	utr5	ENSMUSG00000039108	ProperStrand	26	1	-19.1369
chr11	120209182	120209365	protein_coding	Actg1	exon	ENSMUSG00000062825	ProperStrand	178	chr7	116664818	116664898	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-0.9212
chr4	98174632	98174722	protein_coding-noncoding	Inadl	utr5	ENSMUSG00000061859	NonProperStrand	1	chr4	98174974	98175054	protein_coding	Inadl	intron	ENSMUSG00000061859	NonProperStrand	15	1	-inf
chr11	116535927	116535981	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr4	116827010	116827319	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	1	-3.1175
chr2	90235318	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	133904390	133904407	protein_coding	Mapk3	exon	ENSMUSG00000063065	NonProperStrand	5	1	-9.5409
chr12	17553011	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr9	15120932	15120969	snoRNA	ENSMUSG00000065265_SNORA32	.	ENSMUSG00000065265	ProperStrand	101	1	-4.0931
chr7	108440949	108440967	protein_coding	Atg16l2	intron	ENSMUSG00000047767	ProperStrand	121	chr10	23505148	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-1.7594
chr11	78313939	78313956	protein_coding	Vtn	exon	ENSMUSG00000017344	ProperStrand	188	chr5	135073916	135073953	protein_coding	Rfc2	utr3	ENSMUSG00000023104	ProperStrand	8	1	-15.1385
chr6	69627464	69627544	LINE	L1_Mus1	L1	chr6L1_Mus169627459	NonProperStrand	1	chr6	69627285	69627375	LINE	L1_Mus3	L1	chr6L1_Mus369627264	NonProperStrand	1	1	-inf
chr2	72552353	72552369	lincRNA	8430437L04Rik	exon	ENSMUSG00000085252	NonProperStrand	1	chr11	106362568	106362635	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-inf
chr2	127949373	127949389	protein_coding	Acoxl	utr3	ENSMUSG00000027380	ProperStrand	8	chr4	131908833	131908890	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.7736
chr19	42199430	42199446	protein_coding	Avpi1	exon	ENSMUSG00000018821	NonProperStrand	9	chr3	90197173	90197671	protein_coding	Ints3	exon	ENSMUSG00000027933	ProperStrand	87	1	-16.4041
chr4	142718945	142719045	protein_coding	Prdm2	intron	ENSMUSG00000057637	ProperStrand	46	chr4	131908689	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.6050
chr6	56051505	56051521	protein_coding	Pde1c	utr3	ENSMUSG00000004347	ProperStrand	31	chr12	101704422	101733493	protein_coding	Ttc7b	exon	ENSMUSG00000033530	ProperStrand	49	2	-24.3904
chr6	32113225	32113305	protein_coding	Plxna4	intron	ENSMUSG00000029765	NonProperStrand	15	chr6	32111370	32111460	protein_coding	Plxna4	intron	ENSMUSG00000029765	ProperStrand	15	1	-19.0472
chr8	72287172	72287188	protein_coding	Zfp866	utr3	ENSMUSG00000043090	NonProperStrand	134	chr18	33954814	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	8	-18.0813
chr8	59992253	59992789	protein_coding	Hmgb2	exon	ENSMUSG00000054717	ProperStrand	184	chr9	15119668	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-3.0439
chr15	98860844	98864603	protein_coding	Tuba1c	exon	ENSMUSG00000043091	ProperStrand	28	chr11	6428087	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.6242
chr11	74631947	74632013	protein_coding	Mettl16	utr3	ENSMUSG00000010554	ProperStrand	13	chr2	164311966	164311983	protein_coding	Dbndd2	utr5	ENSMUSG00000017734	ProperStrand	53	1	-16.6914
chr8	3614249	3614265	protein_coding	Xab2	exon	ENSMUSG00000019470	ProperStrand	52	chr5	108336363	108336411	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-5.1583
chr2	32818840	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	chr7	52382752	52382812	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	2	-0.7523
chr11	95238888	95238988	protein_coding	Fam117a	exon	ENSMUSG00000038893	ProperStrand	18	chr9	120038000	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-7.0883
chr6	122266440	122266475	protein_coding	M6pr	utr3	ENSMUSG00000007458	ProperStrand	56	chr7	29136619	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-4.3853
chr11	102151576	102151627	protein_coding	Atxn7l3	utr3	ENSMUSG00000059995	ProperStrand	24	chr16	23110972	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.3518
chr13	44774175	44774265	SINE	B3	B2	chr13B344774126	ProperStrand	1	chr19	18655039	18655119	protein_coding	Ostf1	utr3	ENSMUSG00000024725	NonProperStrand	2	1	-inf
chr6	45494576	45494594	protein_coding	Cntnap2	intron	ENSMUSG00000039419	NonProperStrand	283	chr7	118219574	118219642	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-1.5004
chr13	107737212	107737228	protein_coding	Dimt1	utr5	ENSMUSG00000021692	ProperStrand	185	chr2	31657577	31657626	protein_coding	Abl1	utr3	ENSMUSG00000090901	ProperStrand	15	1	-13.8765
chr7	13510745	13510782	protein_coding	Rps5	exon	ENSMUSG00000012848	ProperStrand	108	chr2	76543384	76543740	protein_coding	Ttn	exon	ENSMUSG00000051747	ProperStrand	66	1	-11.9411
chr9	64024935	64024998	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	chr3	123210854	123210985	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	10	-4.3917
chr14	70978910	70979193	protein_coding	Nudt18	exon	ENSMUSG00000045211	ProperStrand	5	chr4	131865856	131865946	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-6.5022
chr9	112088269	112088423	protein_coding-noncoding	Arpp21	utr3	ENSMUSG00000032503	ProperStrand	28	chr13	108972814	108972876	protein_coding	Ercc8	intron	ENSMUSG00000021694	ProperStrand	2	1	-inf
chr10	80935202	80935223	protein_coding	Celf5	intron	ENSMUSG00000034818	ProperStrand	16	chr12	110887828	110887881	snoRNA	ENSMUSG00000084549_SNORD113	.	ENSMUSG00000084549	ProperStrand	196	3	-inf
chr7	13896674	13896764	protein_coding	Lig1	utr3	ENSMUSG00000056394	ProperStrand	89	chr11	97642977	97643057	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.8258
chr8	123102775	123102865	protein_coding	Gse1	utr3	ENSMUSG00000031822	ProperStrand	97	chr11	116938557	116938637	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-5.2193
chr5	123328574	123328596	protein_coding	Kdm2b	exon	ENSMUSG00000029475	ProperStrand	30	chr9	44315005	44315049	protein_coding	Bcl9l	exon	ENSMUSG00000063382	ProperStrand	12	1	-18.0788
chr15	12110669	12113777	protein_coding	Zfr	exon	ENSMUSG00000022201	ProperStrand	48	chr17	35299561	35299641	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-5.2097
chr17	45723060	45723120	protein_coding	Slc29a1	exon	ENSMUSG00000023942	ProperStrand	95	chr7	29136526	29136616	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.6289
chr9	120040119	120040218	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	chr15	34370536	34370636	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	10	-13.0754
chr7	104540067	104540095	protein_coding	Alg8	exon	ENSMUSG00000035704	ProperStrand	2	chr17	35089182	35089246	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-12.9029
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr11	101466285	101466350	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	1	-3.4481
chr2	90235286	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr18	20976263	20976281	protein_coding	Trappc8	utr3	ENSMUSG00000033382	ProperStrand	43	1	-5.1055
chr16	50197092	50197137	protein_coding	Bbx	utr3	ENSMUSG00000022641	ProperStrand	18	chr6	108438588	108439810	protein_coding	Itpr1	exon	ENSMUSG00000030102	NonProperStrand	15	1	-18.7706
chrX	49967185	49967202	antisense	A630012P03Rik	.	ENSMUSG00000055110	ProperStrand	10	chr5	130162724	130162749	protein_coding	Zfp11	exon	ENSMUSG00000051034	ProperStrand	3	1	-inf
chr12	70462165	70462212	misc_RNA	AC157822.1	.	ENSMUSG00000092773	ProperStrand	18	chr12	110918156	110918221	snoRNA	ENSMUSG00000065749_AF357428	.	ENSMUSG00000065749	ProperStrand	218	1	-13.1718
chr5	147766964	147766995	protein_coding	Gtf3a	exon	ENSMUSG00000016503	ProperStrand	11	chr10	80641702	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	1	-11.0015
chr2	71739222	71739239	protein_coding	Pdk1	utr3	ENSMUSG00000006494	ProperStrand	37	chr1	39605627	39605696	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-8.3119
chr4	136109818	136110165	protein_coding	Kdm1a	exon	ENSMUSG00000036940	ProperStrand	83	chr4	131908688	131908710	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.8165
chr17	45704137	45704155	protein_coding	Slc35b2	exon	ENSMUSG00000037089	ProperStrand	55	chr18	35714144	35714286	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	6	-18.4966
chr13	9833580	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr8	86254117	86255862	protein_coding	Cd97	exon	ENSMUSG00000002885	ProperStrand	37	6	-19.5758
chr3	89812216	89812274	protein_coding	Ubap2l	exon	ENSMUSG00000042520	ProperStrand	88	chr2	130103774	130103825	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	3	-17.0646
chr5	31093938	31093956	protein_coding	Dpysl5	exon	ENSMUSG00000029168	NonProperStrand	38	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-11.3497
chr7	87432772	87432831	protein_coding	Vps33b	intron	ENSMUSG00000030534	ProperStrand	13	chr4	140278879	140278969	protein_coding	Rcc2	utr3	ENSMUSG00000040945	ProperStrand	228	7	-inf
chr2	90235297	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	33258845	33258864	protein_coding	Ranbp17	intron	ENSMUSG00000040594	NonProperStrand	29	1	-5.8800
chr7	87227381	87230877	protein_coding	Zfp710	exon	ENSMUSG00000048897	ProperStrand	229	chr1	162966007	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-1.3669
chr2	90235308	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	55904036	55904052	protein_coding	Rcn2	exon	ENSMUSG00000032320	ProperStrand	11	1	-7.8469
chr10	80263987	80264044	protein_coding	Sf3a2	exon	ENSMUSG00000020211	ProperStrand	50	chr1	59539683	59539700	protein_coding	Fzd7	utr5	ENSMUSG00000041075	ProperStrand	373	1	-10.0197
chr15	76911691	76911735	protein_coding	Rbfox2	utr3	ENSMUSG00000033565	ProperStrand	55	chr17	32193708	32193741	protein_coding	Rrp1b	exon	ENSMUSG00000058392	ProperStrand	38	1	-14.4094
chr14	35497382	35497408	protein_coding	Wapal	intron	ENSMUSG00000041408	NonProperStrand	3	chr7	30046650	30046694	protein_coding	Spint2	intron	ENSMUSG00000074227	ProperStrand	82	1	-20.1536
chr3	89184320	89184336	protein_coding	Zbtb7b	exon	ENSMUSG00000028042	ProperStrand	19	chrX	105964306	105964343	protein_coding	Brwd3	exon	ENSMUSG00000063663	ProperStrand	16	1	-18.3346
chr15	12126856	12126946	SINE	B1F1	Alu	chr15B1F112126848	ProperStrand	1	chr2	104092770	104092850	protein_coding	D430041D05Rik	exon	ENSMUSG00000068373	ProperStrand	12	1	-inf
chr16	36000310	36000362	protein_coding	Kpna1	exon	ENSMUSG00000022905	ProperStrand	38	chr19	8798487	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-9.9382
chr2	32006847	32006883	protein_coding	Prrc2b	intron	ENSMUSG00000039262	ProperStrand	344	chr2	86138158	86138174	protein_coding	Olfr1052	exon	ENSMUSG00000047149	NonProperStrand	119	1	-8.4435
chr8	26794555	26794571	protein_coding	Whsc1l1	intron	ENSMUSG00000054823	ProperStrand	36	chr17	39985577	39985645	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-6.9452
chr19	4860256	4860290	protein_coding	Ctsf	exon	ENSMUSG00000083282	ProperStrand	6	chr18	35714170	35714291	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	3	-18.6849
chr10	6450631	6450649	protein_coding	Plekhg1	intron	ENSMUSG00000040624	NonProperStrand	75	chr1	89681132	89681172	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-5.0072
chr9	120038335	120039276	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	chr17	35088957	35089001	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-2.3540
chr7	3657394	3657482	protein_coding	Rps9	exon	ENSMUSG00000006333	ProperStrand	87	chr3	152121377	152121393	protein_coding	Zzz3	utr3	ENSMUSG00000039068	NonProperStrand	4	1	-18.0577
chr9	99483993	99484009	protein_coding	Dbr1	exon	ENSMUSG00000032469	ProperStrand	162	chr18	73693118	73693137	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-3.6306
chr4	57869695	57869742	protein_coding	Gm20459	exon	ENSMUSG00000089945	ProperStrand	31	chr9	15119737	15119767	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-6.4865
chr9	21823257	21823273	protein_coding	Elavl3	exon	ENSMUSG00000003410	NonProperStrand	137	chr15	25916633	25916664	protein_coding	Zfp622	exon	ENSMUSG00000052253	ProperStrand	7	1	-16.1257
chr12	111867270	111867533	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr7	52378398	52378415	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	1	-3.8618
chr6	29402892	29403209	protein_coding	Flnc	exon	ENSMUSG00000068699	ProperStrand	15	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.2332
chr2	181371634	181371651	protein_coding	Prpf6	exon	ENSMUSG00000002455	ProperStrand	54	chr16	23111374	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-2.6689
chr5	136130966	136131056	LTR	ORR1A2	MaLR	chr5ORR1A2136130893	ProperStrand	1	chr9	15119680	15119760	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-inf
chr5	143874599	143874615	protein_coding	Rnf216	utr5	ENSMUSG00000045078	ProperStrand	38	chrX	34622907	34623026	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	NonProperStrand	26	1	-15.9381
chr8	73028318	73028361	protein_coding	2810428I15Rik	utr3	ENSMUSG00000058833	ProperStrand	7	chr4	149618398	149619225	protein_coding	Eno1	exon	ENSMUSG00000063524	ProperStrand	432	6	-inf
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr3	76069096	76069114	protein_coding	Fstl5	intron	ENSMUSG00000034098	ProperStrand	23	1	-9.7285
chr1	88252836	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	chr1	9932550	9932601	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-1.5513
chr17	35643118	35647481	protein_coding	Pou5f1	exon	ENSMUSG00000024406	ProperStrand	104	chr15	34370544	34370660	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	3	-6.7278
chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	1	-5.5244
chr18	10151059	10151139	snRNA	ENSMUSG00000065941_U1	.	ENSMUSG00000065941	ProperStrand	47	chr5	121655039	121655129	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.2071
chr11	77994802	77994828	snoRNA	ENSMUSG00000064540_Snord42a	.	ENSMUSG00000064540	ProperStrand	142	chr3	108357274	108357374	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-2.9454
chr13	56185615	56191147	protein_coding	H2afy	exon	ENSMUSG00000015937	ProperStrand	103	chr15	88989157	88989402	protein_coding	Plxnb2	exon	ENSMUSG00000036606	ProperStrand	119	1	-10.8527
chr10	72558057	72558137	LTR	RLTR28	ERVL	chr10RLTR2872557742	ProperStrand	1	chr1	72351303	72351393	LTR	RLTR28	ERVL	chr1RLTR2872351325	ProperStrand	1	1	-inf
chr5	144275590	144275623	protein_coding	Rac1	exon	ENSMUSG00000001847	ProperStrand	32	chr1	173433176	173433222	protein_coding	B930036N10Rik	utr3	ENSMUSG00000091993	ProperStrand	150	1	-12.7455
chr10	25242345	25242435	protein_coding	Epb4.1l2	utr3	ENSMUSG00000019978	ProperStrand	105	chr19	8963092	8963172	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.4033
chr3	130178559	130178575	protein_coding	Col25a1	exon	ENSMUSG00000058897	NonProperStrand	8	chr12	88778631	88778714	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-10.6116
chr19	41627078	41627118	protein_coding	Lcor	exon	ENSMUSG00000025019	ProperStrand	17	chr19	8799046	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-8.3609
chr12	13363776	13367787	protein_coding	Nbas	exon	ENSMUSG00000020576	ProperStrand	35	chr16	57391761	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	2	-14.1073
chr5	139710684	139710735	protein_coding	Sun1	exon	ENSMUSG00000036817	ProperStrand	108	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-7.0089
chr15	79746477	79746577	protein_coding	Cbx7	utr3	ENSMUSG00000053411	ProperStrand	62	chr5	74489615	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-3.7170
chr5	74489215	74489305	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr3	130431721	130432006	protein_coding	Rpl34	exon	ENSMUSG00000062006	ProperStrand	51	2	-9.6753
chr3	89812188	89827445	protein_coding	Ubap2l	exon	ENSMUSG00000042520	ProperStrand	88	chr16	23110828	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	7	-3.5625
chr17	47600913	47600948	protein_coding	AI661453	exon	ENSMUSG00000034382	ProperStrand	8	chr16	23110909	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-8.6552
chr4	153533410	153533510	protein_coding	Tprgl	exon	ENSMUSG00000029030	ProperStrand	50	chr7	16534823	16534839	protein_coding	Ehd2	utr3	ENSMUSG00000074364	NonProperStrand	197	1	-11.2960
chr11	5180669	5180685	protein_coding	Znrf3	utr3	ENSMUSG00000041961	NonProperStrand	210	chr3	34549488	34549527	protein_coding	Sox2	exon	ENSMUSG00000074637	ProperStrand	299	1	-7.5922
chr10	127523396	127523450	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr12	70474616	70474704	protein_coding	Arf6	utr3	ENSMUSG00000044147	ProperStrand	32	1	-9.9327
chr1	162966813	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	chr11	51551280	51551430	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	4	-5.3877
chr11	119136228	119136244	protein_coding	Gaa	exon	ENSMUSG00000025579	NonProperStrand	201	chr4	137089432	137089465	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	1	-5.7136
chr12	101441872	101443866	protein_coding	Calm1	exon	ENSMUSG00000001175	ProperStrand	23	chr7	51505260	51505308	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	2	-15.9380
chr11	87418001	87418091	protein_coding	Mtmr4	exon	ENSMUSG00000018401	ProperStrand	14	chr11	69481352	69481432	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-6.0079
chr2	90235293	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	103321552	103321569	protein_coding	Arhgap24	exon	ENSMUSG00000057315	NonProperStrand	21	1	-6.5250
chr2	23398798	23398821	protein_coding	Spopl	exon	ENSMUSG00000026771	ProperStrand	5	chr7	119934438	119934484	protein_coding	Tead1	intron	ENSMUSG00000055320	ProperStrand	217	1	-15.9110
chr15	99240097	99240197	protein_coding	Tmbim6	utr3	ENSMUSG00000023010	ProperStrand	64	chr10	23505149	23505209	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.1465
chr13	97428548	97428639	protein_coding	Hmgcr	exon	ENSMUSG00000021670	ProperStrand	56	chr11	69481351	69481431	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.3259
chr8	127407452	127407468	protein_coding	Gnpat	exon	ENSMUSG00000031985	NonProperStrand	13	chr7	117189863	117189922	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-9.2973
chr5	31345678	31350090	protein_coding	Slc5a6	utr5	ENSMUSG00000006641	ProperStrand	11	chr16	23110920	23111005	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-10.0359
chr13	74617566	74617608	LTR	ORR1B1	MaLR	chr13ORR1B174617456	ProperStrand	1	chr7	116663634	116663696	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-inf
chr1	98001641	98001658	LINE	Lx	L1	chr1Lx98001007	ProperStrand	1	chr15	34370545	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-inf
chr2	34583898	34583988	protein_coding	Gapvd1	exon	ENSMUSG00000026867	ProperStrand	31	chr16	23110829	23110989	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.0160
chr3	121969949	121970017	protein_coding	Gclm	utr3	ENSMUSG00000028124	ProperStrand	31	chr4	131908723	131908797	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.2342
chr9	88415969	88416025	lincRNA	Snhg5	exon	ENSMUSG00000032424	ProperStrand	13	chr17	13112512	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	3	-17.2377
chr11	50048108	50048198	protein_coding	Mgat4b	utr3	ENSMUSG00000036620	ProperStrand	10	chr4	131908265	131908345	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.5892
chr17	34089477	34089519	protein_coding	Rps18	exon	ENSMUSG00000008668	ProperStrand	111	chr19	8963085	8963186	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.3249
chr5	33953117	33957313	protein_coding	Fam53a	exon	ENSMUSG00000037339	ProperStrand	18	chr15	98356816	98356906	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	7	-19.4608
chr9	44591821	44591837	protein_coding	Ift46	exon	ENSMUSG00000002031	ProperStrand	28	chr3	108357368	108357573	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	6	-21.1737
chr5	115594023	115594041	protein_coding	Mlec	utr3	ENSMUSG00000048578	ProperStrand	47	chr3	68889026	68889140	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-3.7063
chr2	27390526	27390616	protein_coding	Wdr5	utr3	ENSMUSG00000026917	ProperStrand	81	chr10	23506278	23506346	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-6.3532
chr7	24779190	24779213	SINE	ID_B1	B4	chr7ID_B124779183	NonProperStrand	54	chr1	17152618	17152634	protein_coding	Gdap1	utr3	ENSMUSG00000025777	ProperStrand	1	1	-inf
chr19	16457775	16457802	protein_coding	Gnaq	exon	ENSMUSG00000024639	ProperStrand	38	chrX	34622928	34623018	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-4.0169
chr17	88374679	88379554	protein_coding	Msh6	exon	ENSMUSG00000005370	ProperStrand	150	chr1	161270460	161270540	snoRNA	ENSMUSG00000089536_Scarna3a	.	ENSMUSG00000089536	ProperStrand	247	1	-8.6411
chr2	35056094	35056111	protein_coding	Rab14	intron	ENSMUSG00000026878	NonProperStrand	1	chr1	72898625	72898692	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	1	-inf
chr2	33263020	33263110	protein_coding	Zbtb34	utr3	ENSMUSG00000068966	ProperStrand	9	chr11	69483151	69483231	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-6.0733
chr5	28679134	28679174	protein_coding	Rbm33	exon	ENSMUSG00000048271	ProperStrand	78	chr12	112779249	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	2	-7.1390
chr15	77151024	77151114	LTR	ORR1B1	MaLR	chr15ORR1B177150871	NonProperStrand	1	chr15	77151274	77151354	SINE	B1_Mus2	Alu	chr15B1_Mus277151262	NonProperStrand	1	1	-inf
chr3	33613943	33614033	LINE	L1VL2	L1	chr3L1VL233613775	NonProperStrand	1	chr3	33613692	33613782	LINE	Lx7	L1	chr3Lx733613684	NonProperStrand	1	1	-inf
chr4	153533410	153533510	protein_coding	Tprgl	exon	ENSMUSG00000029030	ProperStrand	50	chr8	73123052	73123278	protein_coding	Ssbp4	exon	ENSMUSG00000070003	ProperStrand	39	1	-14.5399
chr2	90235298	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	153534526	153534542	protein_coding	Tprgl	exon	ENSMUSG00000029030	ProperStrand	50	1	-4.8130
chr11	102294588	102294611	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr7	116664794	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	15	-11.7578
chr7	52721614	52721646	protein_coding	Bax	exon	ENSMUSG00000003873	ProperStrand	24	chr9	15119675	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	4	-14.0324
chr1	75423648	75423667	protein_coding	Speg	exon	ENSMUSG00000026207	NonProperStrand	11	chr10	23505152	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.1476
chr6	124820503	124820522	protein_coding	Cd4	exon	ENSMUSG00000023274	ProperStrand	9	chr10	23506278	23506348	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	2	-17.0829
chr17	43843088	43843104	protein_coding	Cyp39a1	intron	ENSMUSG00000023963	NonProperStrand	81	chr5	108336377	108336434	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-4.3062
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr16	20179623	20179639	protein_coding	Yeats2	exon	ENSMUSG00000041215	NonProperStrand	23	1	-10.6535
chr14	34781303	34781393	protein_coding	Zfp488	utr3	ENSMUSG00000044519	ProperStrand	54	chr12	80480300	80480380	protein_coding	Rad51l1	intron	ENSMUSG00000059060	ProperStrand	26	1	-15.2089
chr3	67237341	67239448	protein_coding	Gfm1	exon	ENSMUSG00000027774	ProperStrand	31	chr19	8963120	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.4420
chr9	108362897	108365307	protein_coding	Ccdc71	utr5	ENSMUSG00000049305	ProperStrand	4	chr4	131865417	131865497	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-9.5621
chr9	108415229	108415416	protein_coding	Qars	exon	ENSMUSG00000032604	ProperStrand	16	chr10	90581059	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-7.4331
chr13	9833563	9833662	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr6	30329147	30329171	rRNA	n-R5s161	.	ENSMUSG00000065662	ProperStrand	7	2	-14.9821
chr14	76247751	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	chr19	44188493	44188573	snoRNA	ENSMUSG00000077391_SNORA12	.	ENSMUSG00000077391	ProperStrand	506	16	-19.4164
chr13	98709428	98709446	protein_coding	Rgnef	utr3	ENSMUSG00000021662	ProperStrand	30	chr7	52378415	52378481	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	1	-9.9009
chr15	96839432	96847216	protein_coding	Slc38a4	exon	ENSMUSG00000022464	ProperStrand	139	chr11	97642952	97643047	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	8	-12.9972
chr1	24621043	24621133	protein_coding	Gm10925	utr3	ENSMUSG00000090378	ProperStrand	320	chr5	108336363	108336443	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-1.8806
chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr5	40084192	40084208	protein_coding	Hs3st1	intron	ENSMUSG00000051022	NonProperStrand	2	1	-13.8986
chr2	76471660	76471676	protein_coding	Prkra	exon	ENSMUSG00000002731	NonProperStrand	65	chr14	119086682	119086758	protein_coding	Abcc4	intron	ENSMUSG00000032849	ProperStrand	137	1	-11.4949
chr14	24968704	24969420	protein_coding	Dlg5	exon	ENSMUSG00000021782	ProperStrand	46	chr5	130295428	130295508	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	10	-inf
chr9	99483993	99484009	protein_coding	Dbr1	exon	ENSMUSG00000032469	ProperStrand	162	chr8	73419662	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-1.4897
chr12	114290175	114290191	protein_coding	Pacs2	intron	ENSMUSG00000021143	NonProperStrand	302	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	3	-6.0061
chr11	97546405	97546421	protein_coding	Mllt6	utr3	ENSMUSG00000038437	ProperStrand	110	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-7.7158
chr7	129311263	129312092	protein_coding	Plk1	exon	ENSMUSG00000030867	ProperStrand	146	chr17	13112530	13112549	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-2.9332
chr5	74489540	74489629	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr11	97643034	97643114	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	1	-0.9363
chr19	4803821	4803944	protein_coding	Rbm14	exon	ENSMUSG00000006456	ProperStrand	84	chr11	6428035	6428076	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	17	-inf
chr10	23506849	23507005	protein_coding	Rps12	utr5	ENSMUSG00000061983	ProperStrand	309	chrX	103395008	103395503	protein_coding	Pgk1	exon	ENSMUSG00000062070	ProperStrand	484	1	-5.8830
chr14	51427120	51427349	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr11	69483136	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	14	-2.2516
chr9	120038657	120039378	protein_coding	Rpsa	intron	ENSMUSG00000032518	ProperStrand	398	chr9	15119296	15119425	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	6	-11.1274
chr11	98091476	98092306	protein_coding	Cdk12	exon	ENSMUSG00000003119	NonProperStrand	1	chr11	62418036	62418078	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-inf
chr18	32405206	32405222	protein_coding	Ercc3	exon	ENSMUSG00000024382	ProperStrand	280	chr6	71832629	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-2.7293
chr14	27950486	27950566	SINE	B1_Mus2	Alu	chr14B1_Mus227950408	ProperStrand	1	chr14	32234509	32234599	protein_coding	Sh3bp5	intron	ENSMUSG00000021892	NonProperStrand	2	1	-inf
chr11	78020756	78020846	protein_coding	Supt6h	utr3	ENSMUSG00000002052	ProperStrand	119	chr5	121655017	121655097	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.5201
chr14	105551747	105552694	protein_coding	Rbm26	exon	ENSMUSG00000022119	ProperStrand	60	chr18	22523011	22523029	protein_coding	Asxl3	intron	ENSMUSG00000045215	NonProperStrand	8	4	-19.7622
chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-4.8657
chr7	50690726	50690742	protein_coding	Lim2	exon	ENSMUSG00000004613	NonProperStrand	50	chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-8.2259
chr3	89559291	89559307	protein_coding	Chrnb2	utr3	ENSMUSG00000027950	ProperStrand	8	chr2	144087414	144087463	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-10.6601
chr12	93050358	93050386	protein_coding	Sel1l	exon	ENSMUSG00000020964	ProperStrand	27	chr16	23110911	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-3.7531
chr12	85329141	85329157	protein_coding	Acot2	exon	ENSMUSG00000021226	ProperStrand	5	chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-11.5949
chr19	10525979	10525997	protein_coding	Syt7	utr3	ENSMUSG00000024743	NonProperStrand	17	chr4	131865867	131865986	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-9.9145
chr2	47962755	47962773	lincRNA	Gm13481	intron	ENSMUSG00000086353	NonProperStrand	36	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.2292
chr9	58703524	58703540	protein_coding	Hcn4	exon	ENSMUSG00000032338	NonProperStrand	19	chr9	15119714	15119756	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.7702
chr5	89383967	89457318	protein_coding	Slc4a4	exon	ENSMUSG00000060961	NonProperStrand	195	chr9	120038467	120038529	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.1606
chr11	68874381	68874398	protein_coding	2310047M10Rik	utr3	ENSMUSG00000045176	ProperStrand	7	chr7	52381972	52382015	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-11.1164
chr5	4082188	4082246	protein_coding	Cyp51	utr3	ENSMUSG00000001467	ProperStrand	13	chr16	23110974	23111005	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.3283
chr12	85944281	85944920	protein_coding	Abcd4	exon	ENSMUSG00000021240	ProperStrand	6	chr2	26494705	26494777	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-7.6788
chr12	60090421	60092020	protein_coding	Sec23a	exon	ENSMUSG00000020986	ProperStrand	16	chr9	15119733	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.1098
chrX	47917678	47917732	lincRNA	6720401G13Rik	intron	ENSMUSG00000085396	ProperStrand	34	chr1	59541730	59541785	protein_coding	Fzd7	utr3	ENSMUSG00000041075	ProperStrand	373	1	-10.7986
chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	chr11	69481335	69481432	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	3	-3.1281
chrX	7469524	7469616	protein_coding	Slc35a2	exon	ENSMUSG00000031156	ProperStrand	14	chr9	120038553	120038633	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.8314
chr4	155366536	155366553	protein_coding	B3galt6	exon	ENSMUSG00000050796	ProperStrand	40	chr17	24857830	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.0012
chr17	54707938	54708028	LTR	ORR1B1	MaLR	chr17ORR1B154707750	NonProperStrand	1	chr17	54707563	54707643	LTR	RMER15	ERVL	chr17RMER1554707363	ProperStrand	1	1	-inf
chr9	110450107	110450194	protein_coding	Setd2	utr5	ENSMUSG00000044791	ProperStrand	51	chr16	23110455	23110532	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.7428
chr19	6070738	6070756	protein_coding	1110014N23Rik	exon	ENSMUSG00000024797	ProperStrand	49	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-5.6072
chr4	147994720	147994745	protein_coding	Tardbp	exon	ENSMUSG00000041459	ProperStrand	120	chr2	26768370	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-4.2657
chr4	46463960	46464002	protein_coding	Anp32b	utr5	ENSMUSG00000028333	ProperStrand	229	chr2	26494708	26494808	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.0030
mmu-miR-16-1-3p	0	20	miRNA	mmu-miR-16-1-3p	.	mmu-miR-16-1-3p	ProperStrand	2	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-inf
chr11	55313172	55313252	protein_coding	G3bp1	utr3	ENSMUSG00000018583	ProperStrand	106	chr13	51743572	51743662	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	4	-17.3081
chr15	102146475	102146565	protein_coding	Espl1	exon	ENSMUSG00000058290	ProperStrand	172	chr5	130300460	130300540	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-0.9348
chr4	123052134	123052156	protein_coding	Macf1	exon	ENSMUSG00000028649	ProperStrand	320	chr8	74446729	74446745	protein_coding	Zfp617	intron	ENSMUSG00000066880	NonProperStrand	208	1	-7.4767
chr10	75977687	75977703	protein_coding	Mcm3ap	intron	ENSMUSG00000001150	ProperStrand	95	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.4660
chr5	114870112	114870192	protein_coding	Ube3b	utr3	ENSMUSG00000029577	ProperStrand	26	chr14	76247735	76247825	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-5.7966
chr15	57496012	57496032	LTR	RMER15	ERVL	chr15RMER1557495890	NonProperStrand	10	chr6	88446431	88446470	protein_coding	Ruvbl1	exon	ENSMUSG00000030079	ProperStrand	24	2	-inf
chr6	146708677	146708693	protein_coding	Stk38l	exon	ENSMUSG00000001630	ProperStrand	60	chr11	69483197	69483236	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.4498
chrX	71517837	71517951	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	chr11	98878343	98878410	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	6	-5.7622
chrX	160396313	160396329	protein_coding	Zrsr2	utr5	ENSMUSG00000031370	ProperStrand	57	chr11	33061600	33062969	protein_coding	Npm1	exon	ENSMUSG00000057113	ProperStrand	352	1	-9.8717
chr2	164796661	164796679	protein_coding	Slc12a5	intron	ENSMUSG00000017740	NonProperStrand	40	chrX	84483703	84483725	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-9.0633
chr15	79538469	79542611	protein_coding	Gtpbp1	exon	ENSMUSG00000042535	ProperStrand	56	chr11	69481397	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-5.6946
chr7	148068059	148068079	protein_coding	Sirt3	utr5	ENSMUSG00000025486	ProperStrand	33	chr7	116664872	116664889	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.6237
chr11	30045830	30045860	protein_coding	Spnb2	exon	ENSMUSG00000020315	ProperStrand	103	chr4	131866155	131866245	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	6	-15.0762
chr14	19101803	19101827	protein_coding	Rpl15	exon	ENSMUSG00000012405	ProperStrand	145	chr19	8963025	8963083	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-0.9731
chr14	21502352	21502417	protein_coding	Sec24c	exon	ENSMUSG00000039367	ProperStrand	60	chr9	120038605	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.0390
chr2	16278620	16278637	protein_coding	Plxdc2	utr5	ENSMUSG00000026748	NonProperStrand	44	chr4	131866155	131866292	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	5	-17.4246
chrX	20225536	20226288	protein_coding	Rbm10	exon	ENSMUSG00000031060	ProperStrand	31	chr12	88488443	88496423	protein_coding	Pomt2	exon	ENSMUSG00000034126	NonProperStrand	331	1	-11.2246
chr2	168010541	168010557	protein_coding	Adnp	exon	ENSMUSG00000051149	NonProperStrand	6	chr16	23110828	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.7876
chr14	42060972	42061078	snRNA	ENSMUSG00000075938_U6	.	ENSMUSG00000075938	ProperStrand	1	chr16	23110913	23110940	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chrX	127173957	127174047	LTR	MLT1F-int	MaLR	chrXMLT1F-int127173829	NonProperStrand	1	chrX	127174497	127174577	LTR	MLT1F-int	MaLR	chrXMLT1F-int127174407	NonProperStrand	1	1	-inf
chr18	38062784	38062801	protein_coding	Diap1	exon	ENSMUSG00000024456	ProperStrand	77	chr15	79913298	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-3.1370
chr12	3965111	3965127	protein_coding	Efr3b	utr3	ENSMUSG00000020658	NonProperStrand	6	chr1	162965997	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-8.2222
chr7	13516165	13516195	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr6	64424697	64424716	protein_coding	Grid2	intron	ENSMUSG00000071424	NonProperStrand	76	1	-8.1934
chr13	8756716	8766308	protein_coding	Adarb2	utr3	ENSMUSG00000052551	ProperStrand	292	chr14	33005085	33005138	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	2	-2.5104
chr15	83286132	83286167	protein_coding	Pacsin2	intron	ENSMUSG00000016664	ProperStrand	30	chr16	23111448	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-4.1722
chr11	117223470	117223560	protein_coding	Sept9	utr3	ENSMUSG00000059248	ProperStrand	60	chrX	34622939	34623019	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-3.1711
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr5	130300449	130300554	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	6	-5.4618
chr7	146684406	146684425	protein_coding	Inpp5a	intron	ENSMUSG00000025477	ProperStrand	166	chr17	27957279	27957296	protein_coding	D17Wsu92e	utr5	ENSMUSG00000056692	NonProperStrand	11	1	-14.7363
chr12	36219400	36219416	protein_coding	Ahr	utr5	ENSMUSG00000019256	NonProperStrand	64	chr1	166388073	166388097	protein_coding	Atp1b1	utr5	ENSMUSG00000026576	ProperStrand	67	1	-12.9615
chr8	4254338	4254369	protein_coding	Snapc2	exon	ENSMUSG00000011837	ProperStrand	3	chr10	23505151	23505258	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-12.0722
chr14	119125174	119125191	LTR	MLT1F2	MaLR	chr14MLT1F2119124966	ProperStrand	4	chr17	35089181	35089229	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-11.1133
chr7	151765212	151765228	antisense	Gm10574	.	ENSMUSG00000073778	ProperStrand	357	chr15	81725602	81725628	protein_coding	Aco2	exon	ENSMUSG00000022477	ProperStrand	237	1	-7.0020
chr3	33245302	33245392	LTR	RMER6A	ERVK	chr3RMER6A33245144	NonProperStrand	1	chr15	7763663	7763753	protein_coding	Gdnf	intron	ENSMUSG00000022144	NonProperStrand	3	1	-inf
chr1	12750362	12750406	protein_coding	Sulf1	intron	ENSMUSG00000016918	ProperStrand	22	chr16	23110524	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-7.2249
chr14	25285589	25285679	protein_coding	Polr3a	intron	ENSMUSG00000025280	ProperStrand	11	chr4	131908814	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-7.0530
chr16	18969545	18969573	protein_coding	Hira	exon	ENSMUSG00000022702	ProperStrand	28	chr16	94723311	94723386	protein_coding	Dscr3	intron	ENSMUSG00000022898	ProperStrand	8	1	-18.2452
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	79256537	79256554	protein_coding	Palm	intron	ENSMUSG00000035863	ProperStrand	58	1	-4.5275
chr4	44045385	44045476	protein_coding	Clta	utr3	ENSMUSG00000028478	ProperStrand	59	chr4	131865927	131865987	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.7940
chr4	135521534	135521550	protein_coding	Gale	exon	ENSMUSG00000028671	ProperStrand	61	chr6	67217206	67217230	protein_coding	Serbp1	exon	ENSMUSG00000036371	ProperStrand	261	1	-10.3328
chr13	58229542	58229632	protein_coding	Hnrnpa0	exon	ENSMUSG00000007836	NonProperStrand	7	chr17	35299552	35299642	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	NonProperStrand	14	1	-inf
chr18	67944570	67944670	protein_coding	Seh1l	exon	ENSMUSG00000079614	ProperStrand	19	chr4	131865964	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.7782
chr4	49543877	49543967	protein_coding	Zfp189	utr3	ENSMUSG00000039634	ProperStrand	18	chr7	116664810	116664890	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-7.9847
chr9	92433720	92433772	LINE	L2	L2	chr9L292433728	NonProperStrand	1	chr19	18792119	18792181	protein_coding	D030056L22Rik	utr3	ENSMUSG00000047044	ProperStrand	5	1	-inf
chr12	25393850	25393872	protein_coding	Rrm2	exon	ENSMUSG00000020649	ProperStrand	65	chr5	130300448	130300556	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-4.2113
chr18	73693166	73693187	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr9	15119287	15119425	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	7	-1.4872
chr19	6325568	6325584	protein_coding	Cdc42bpg	utr3	ENSMUSG00000024769	NonProperStrand	9	chr19	8963027	8963085	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.8692
chr15	10504979	10504995	protein_coding	Rai14	exon	ENSMUSG00000022246	ProperStrand	180	chr16	18233438	18233457	protein_coding	Zdhhc8	intron	ENSMUSG00000060166	NonProperStrand	9	1	-14.9958
chr14	50144888	50144905	protein_coding	Slc35f4	intron	ENSMUSG00000021852	ProperStrand	11	chr7	116663711	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-5.7314
chr9	74800982	74800998	protein_coding	BC031353	utr5	ENSMUSG00000034858	ProperStrand	14	chr3	123210912	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-4.7278
chr3	88373134	88373160	protein_coding	Ubqln4	utr3	ENSMUSG00000008604	ProperStrand	49	chr15	96242651	96242703	protein_coding	Scaf11	utr3	ENSMUSG00000033228	ProperStrand	37	1	-14.7003
chr16	79706846	79706926	LINE	L1Md_F2	L1	chr16L1Md_F279705109	NonProperStrand	1	chr16	79707259	79707349	LINE	L1Md_F2	L1	chr16L1Md_F279707189	ProperStrand	1	1	-inf
chr7	17460811	17460827	protein_coding	Dact3	exon	ENSMUSG00000078794	ProperStrand	6	chr3	123210878	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-6.4760
chr9	54692678	54692768	LTR	MT2B	ERVL	chr9MT2B54692558	ProperStrand	1	chr9	54692427	54692517	LTR	RLTR14	ERV1	chr9RLTR1454692293	NonProperStrand	1	1	-inf
chr1	75357236	75357258	protein_coding	Des	exon	ENSMUSG00000026208	ProperStrand	2	chr7	56090448	56090466	protein_coding	Csrp3	intron	ENSMUSG00000030470	NonProperStrand	1	1	-inf
chr10	121242090	121244926	protein_coding	Srgap1	exon	ENSMUSG00000020121	NonProperStrand	80	chr19	8799581	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-6.1979
chr15	60763881	60763961	LINE	L1Md_F3	L1	chr15L1Md_F360763520	NonProperStrand	1	chrX	16264100	16264188	protein_coding	Maoa	utr3	ENSMUSG00000025037	ProperStrand	17	1	-inf
chr8	74147703	74147756	protein_coding	Glt25d1	utr3	ENSMUSG00000034807	ProperStrand	36	chr4	131908252	131908342	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.2156
chr3	88985901	88985937	protein_coding	Scamp3	exon	ENSMUSG00000028049	ProperStrand	32	chr3	88684322	88684353	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-8.4943
chr7	3432585	3432617	protein_coding	Cacng6	exon	ENSMUSG00000078815	ProperStrand	4	chr1	162966203	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-13.2442
chr19	23377480	23377496	protein_coding	Mamdc2	utr3	ENSMUSG00000033207	NonProperStrand	1	chr11	69481363	69481432	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-inf
chr5	131950975	131950991	protein_coding	Auts2	utr5	ENSMUSG00000029673	ProperStrand	71	chr4	131908232	131908318	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.1847
chr10	75399113	75399157	protein_coding	Chchd10	exon	ENSMUSG00000049422	ProperStrand	140	chr11	77996560	77996587	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-4.4488
chr15	90473854	90473914	protein_coding	Cpne8	utr3	ENSMUSG00000052560	ProperStrand	4	chr17	24857782	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-7.6570
chr4	132530099	132530116	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	chr6	115757999	115758119	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	2	-3.7359
chr3	102853595	102853649	protein_coding	Csde1	exon	ENSMUSG00000068823	ProperStrand	122	chr4	131908687	131908769	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-3.7475
chr1	194571764	194571880	snRNA	ENSMUSG00000064881_U5	.	ENSMUSG00000064881	ProperStrand	187	chr7	116663633	116663758	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-1.6973
chr5	118518098	118518149	protein_coding	Fbxw8	exon	ENSMUSG00000032867	ProperStrand	61	chr4	83330859	83330918	protein_coding	4930473A06Rik	intron	ENSMUSG00000052407	ProperStrand	19	1	-15.5987
chr13	107737212	107737228	protein_coding	Dimt1	utr5	ENSMUSG00000021692	ProperStrand	185	chr4	116826728	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-4.5852
chr6	135410957	135410974	SINE	MIR	MIR	chr6MIR135410903	NonProperStrand	1	chr19	8963087	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-inf
chr9	108849733	108849920	protein_coding	Uqcrc1	exon	ENSMUSG00000025651	ProperStrand	43	chr5	121655052	121655132	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.3767
chr14	55505121	55505221	protein_coding	Bcl2l2	utr3	ENSMUSG00000089682	ProperStrand	17	chr9	15118287	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	10	-inf
chr7	16534823	16534839	protein_coding	Ehd2	utr3	ENSMUSG00000074364	NonProperStrand	197	chr7	67123728	67123759	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	1	-7.1677
chr10	128203006	128203096	protein_coding	Wibg	exon	ENSMUSG00000064030	ProperStrand	5	chr7	116664809	116664889	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-7.4478
chr4	133236128	133236166	protein_coding	Arid1a	utr3	ENSMUSG00000007880	ProperStrand	465	chrX	160396313	160396329	protein_coding	Zrsr2	utr5	ENSMUSG00000031370	ProperStrand	57	1	-9.3163
chr5	103854542	103854558	protein_coding	Ptpn13	utr5	ENSMUSG00000034573	NonProperStrand	74	chr18	73693171	73693187	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-5.1157
chr3	32611128	32611188	protein_coding	Actl6a	exon	ENSMUSG00000027671	ProperStrand	31	chr9	63868722	63868738	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	1	-9.9171
chr3	83797222	83797322	protein_coding	D930015E06Rik	intron	ENSMUSG00000033767	ProperStrand	17	chr16	23110829	23110867	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.8783
chrX	149830479	149830499	protein_coding	Klf8	utr3	ENSMUSG00000041649	ProperStrand	7	chr2	32818815	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-9.8490
chr19	8799217	8799255	lincRNA	Snhg1	exon	ENSMUSG00000090867	ProperStrand	100	chr19	8963036	8963136	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.4735
chr12	60141322	60141412	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	chr1	162967489	162967509	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	15	-5.9715
chr10	25080307	25080324	protein_coding	Epb4.1l2	intron	ENSMUSG00000019978	ProperStrand	105	chr5	130295414	130295470	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-4.1748
chr8	46439259	46439275	protein_coding	Fam149a	exon	ENSMUSG00000070044	ProperStrand	57	chr1	88247743	88247778	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-5.1965
chr12	112779191	112779281	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	chr11	69482364	69482444	snoRNA	ENSMUSG00000089542_snoU6-77	.	ENSMUSG00000089542	ProperStrand	138	2	-5.5118
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr4	131908688	131908884	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	11	-2.3815
chr1	129693365	129693433	protein_coding-noncoding	Ccnt2	utr5	ENSMUSG00000026349	ProperStrand	3	chr16	23111416	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-6.9982
chr11	100579216	100579238	protein_coding	Rab5c	exon	ENSMUSG00000019173	ProperStrand	76	chr19	8799042	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	2	-8.8027
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr7	38354919	38354935	protein_coding	Zfp536	exon	ENSMUSG00000043456	NonProperStrand	236	1	-6.1855
chr14	31996803	31996843	protein_coding	Nisch	utr3	ENSMUSG00000021910	ProperStrand	125	chr1	145626091	145626193	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-7.3647
chr11	88877589	88877656	protein_coding	Trim25	exon	ENSMUSG00000000275	ProperStrand	50	chr8	40681587	40681603	protein_coding	Msr1	intron	ENSMUSG00000025044	ProperStrand	138	1	-12.0094
chrX	49110553	49110569	protein_coding	Usp26	exon	ENSMUSG00000055780	ProperStrand	10	chr18	35716761	35716854	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-17.7830
chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	3	-9.7390
chr7	25850396	25850458	protein_coding	Grik5	exon	ENSMUSG00000003378	ProperStrand	13	chr5	130300435	130300525	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-5.3899
chr5	144977791	144977807	protein_coding	Tecpr1	exon	ENSMUSG00000066621	ProperStrand	9	chr5	130300419	130300488	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-6.1422
chr17	25996060	25996076	protein_coding	Wdr90	exon	ENSMUSG00000073434	ProperStrand	91	chr1	88252853	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-5.8193
chr11	70468117	70468134	protein_coding	Pfn1	utr5	ENSMUSG00000018293	ProperStrand	55	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-6.0390
chr8	99492693	99492773	LINE	L1Md_F3	L1	chr8L1Md_F399492640	NonProperStrand	1	chr8	99492545	99492635	LTR	RLTR22_Mus	ERVK	chr8RLTR22_Mus99492273	ProperStrand	1	1	-inf
chr8	3541497	3541587	protein_coding	Pnpla6	exon	ENSMUSG00000004565	ProperStrand	60	chr10	23505175	23505255	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.2332
chr17	23946999	23947401	protein_coding	Srrm2	utr5	ENSMUSG00000039218	ProperStrand	521	chr7	118219574	118219625	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	3	-2.4848
chr2	91460710	91460800	protein_coding	Ckap5	utr3	ENSMUSG00000040549	ProperStrand	53	chr11	6428105	6428155	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.4183
chr4	44051908	44053198	protein_coding	Gne	exon	ENSMUSG00000028479	ProperStrand	8	chr4	131908689	131908708	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.7736
chr4	41195651	41195677	protein_coding	Ubap2	intron	ENSMUSG00000028433	ProperStrand	292	chr8	129468746	129468879	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	3	-4.6923
chr11	70796256	70796344	protein_coding	C1qbp	exon	ENSMUSG00000018446	ProperStrand	46	chr15	37954515	37954551	protein_coding	Ubr5	exon	ENSMUSG00000037487	ProperStrand	258	1	-10.9247
chr8	117031549	117031635	protein_coding	Wwox	intron	ENSMUSG00000004637	ProperStrand	41	chr15	79908956	79908999	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-6.2220
chr13	54783587	54783695	protein_coding	Rnf44	exon	ENSMUSG00000034928	NonProperStrand	5	chr9	15119704	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-12.4515
chr1	132950699	132950790	protein_coding	Mapkapk2	utr3	ENSMUSG00000016528	ProperStrand	9	chr7	52382009	52382037	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	2	-16.7793
chr17	24368792	24371339	protein_coding	Ccnf	exon	ENSMUSG00000072082	ProperStrand	149	chr7	148634782	148634802	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-2.3562
chr9	119664282	119664299	protein_coding	Scn11a	exon	ENSMUSG00000034115	ProperStrand	55	chr3	123210895	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.2092
chr11	115506027	115506053	protein_coding	Grb2	utr3	ENSMUSG00000059923	ProperStrand	12	chr4	41158542	41158606	snoRNA	ENSMUSG00000089308_SNORD121A	.	ENSMUSG00000089308	ProperStrand	209	3	-19.3770
chr6	3794651	3794670	SINE	B4A	B4	chr6B4A3794525	NonProperStrand	26	chr7	148634765	148634842	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-5.6034
chr19	25016725	25016793	snoRNA	ENSMUSG00000064896_SNORA19	.	ENSMUSG00000064896	ProperStrand	88	chr2	144087324	144087424	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-5.7911
chr3	57852112	57852132	LINE	Lx8	L1	chr3Lx857852050	ProperStrand	1	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-inf
chr11	60014411	60014447	protein_coding-noncoding	Srebf1	utr3	ENSMUSG00000020538	ProperStrand	2	chr7	116664819	116664909	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-9.7350
chr15	58722054	58722070	protein_coding	Rnf139	intron	ENSMUSG00000037075	ProperStrand	5	chr10	90581034	90581142	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	NonProperStrand	7	1	-20.9134
chr2	120524842	120524942	protein_coding	Stard9	exon	ENSMUSG00000033705	ProperStrand	42	chr4	131908689	131908738	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.7439
chr10	81028670	81028742	protein_coding	Aes	utr3	ENSMUSG00000054452	ProperStrand	34	chr7	150717298	150717350	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	4	-20.0709
chr19	6310881	6311066	protein_coding	Cdc42bpg	exon	ENSMUSG00000024769	ProperStrand	90	chr11	69483136	69483231	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.7883
chr3	94778661	94778677	protein_coding	Pi4kb	utr5	ENSMUSG00000038861	NonProperStrand	18	chr5	121655015	121655099	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-9.9531
chr5	143874599	143874615	protein_coding	Rnf216	utr5	ENSMUSG00000045078	NonProperStrand	29	chr10	23505152	23505255	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.3586
chr10	23506576	23506636	protein_coding	Rps12	exon	ENSMUSG00000061983	ProperStrand	309	chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	1	-6.2315
chr1	120934097	120943150	protein_coding	Gli2	intron	ENSMUSG00000048402	ProperStrand	148	chr17	35087890	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	3	-8.6578
chr7	126859345	126859378	protein_coding	Thumpd1	utr3	ENSMUSG00000030942	ProperStrand	14	chr4	131866170	131866260	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-6.5082
chrX	98470324	98470522	protein_coding	Med12	exon	ENSMUSG00000079487	ProperStrand	79	chr8	98269993	98270082	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-5.0065
chr9	35023153	35023187	protein_coding	Srpr	exon	ENSMUSG00000032042	ProperStrand	54	chr13	23528224	23528285	tRNA	tRNA103-LysCTT	.	670319	ProperStrand	180	3	-19.7753
chr4	98190134	98202217	protein_coding	Inadl	exon	ENSMUSG00000061859	ProperStrand	21	chr17	5347022	5347040	protein_coding	Arid1b	utr3	ENSMUSG00000069729	NonProperStrand	22	2	-19.3269
chr7	52843341	52843627	protein_coding	Bcat2	exon	ENSMUSG00000030826	ProperStrand	24	chr3	123210854	123210894	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	4	-12.3972
chr15	80222303	80222320	protein_coding	Cacna1i	intron	ENSMUSG00000022416	ProperStrand	10	chr9	56785753	56785831	protein_coding	Imp3	exon	ENSMUSG00000032288	ProperStrand	3	1	-inf
chr4	43526327	43526362	protein_coding	Car9	utr3	ENSMUSG00000028463	NonProperStrand	35	chr12	60141352	60141442	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	4	-inf
chr1	82663615	82663635	protein_coding	Col4a3	intron	ENSMUSG00000079465	ProperStrand	99	chr18	33954816	33954861	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	3	-6.8231
chr9	110846426	110846453	protein_coding	Tdgf1	intron	ENSMUSG00000032494	ProperStrand	218	chr1	89673614	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	12	-inf
chr9	107471542	107471559	protein_coding	Hyal2	utr5	ENSMUSG00000010047	NonProperStrand	5	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-10.3212
chr15	81354775	81354791	SINE	B3A	B2	chr15B3A81354761	ProperStrand	16	chr2	57090809	57090826	protein_coding	Gpd2	utr5	ENSMUSG00000026827	ProperStrand	93	1	-15.1243
chr9	50816824	50816841	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	chr1	164670487	164670506	protein_coding	Prrc2c	utr5	ENSMUSG00000040225	NonProperStrand	5	1	-17.0229
chr1	155073578	155097565	protein_coding	Lamc1	exon	ENSMUSG00000026478	ProperStrand	239	chr18	35716741	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	12	-14.0553
chr19	24171158	24172506	protein_coding	Tjp2	exon	ENSMUSG00000024812	ProperStrand	63	chr3	123210891	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-5.4976
chr13	73935007	73935041	protein_coding	Slc12a7	exon	ENSMUSG00000017756	ProperStrand	80	chr9	65120741	65120757	protein_coding	Cilp	exon	ENSMUSG00000042254	ProperStrand	212	1	-10.2037
chr13	76341035	76341055	protein_coding	Fam81b	intron	ENSMUSG00000078966	NonProperStrand	220	chr18	33954816	33954875	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-1.3483
chr10	126532147	126532163	protein_coding	Os9	utr3	ENSMUSG00000040462	NonProperStrand	28	chr9	120038622	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.4612
chr3	55987230	55987246	protein_coding	Nbea	utr5	ENSMUSG00000027799	NonProperStrand	115	chr11	97546405	97546421	protein_coding	Mllt6	utr3	ENSMUSG00000038437	ProperStrand	110	1	-10.7893
chr7	3526412	3526502	LINE	Lx8	L1	chr7Lx83526409	NonProperStrand	2	chr5	108334237	108334317	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-12.2128
chrX	71589885	71589905	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr4	101320380	101325006	protein_coding	Leprot	utr5	ENSMUSG00000035212	ProperStrand	22	1	-12.1811
chr7	133941022	133941208	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	chr12	66067481	66067502	protein_coding	Fam179b	exon	ENSMUSG00000035614	ProperStrand	21	4	-20.3109
chr18	31837050	31837116	protein_coding	Sap130	exon	ENSMUSG00000024260	ProperStrand	32	chr11	6519806	6519899	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	4	-inf
chr1	194571853	194571881	snRNA	ENSMUSG00000064881_U5	.	ENSMUSG00000064881	ProperStrand	187	chr3	68889026	68889126	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-1.3846
chr9	44619002	44619018	protein_coding	Mll1	exon	ENSMUSG00000002028	ProperStrand	151	chr19	8798740	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	2	-5.2979
chr2	154341622	154341655	protein_coding	Cbfa2t2	exon	ENSMUSG00000038533	ProperStrand	99	chr19	8963033	8963133	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	8	-14.9057
chr2	22445013	22445059	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	chr12	88778632	88778722	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-1.4801
chr11	101645784	101645807	protein_coding-noncoding	Etv4	utr3	ENSMUSG00000017724	NonProperStrand	9	chr18	82662186	82662202	protein_coding	Mbp	intron	ENSMUSG00000041607	NonProperStrand	185	1	-14.9331
chr2	4915003	4915045	protein_coding	Mcm10	intron	ENSMUSG00000026669	ProperStrand	21	chr7	117166789	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	2	-11.1504
chr5	66651465	66651481	protein_coding	Nsun7	utr5	ENSMUSG00000029206	NonProperStrand	73	chr19	8799581	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-6.3785
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr2	33013309	33013325	protein_coding	Ralgps1	exon	ENSMUSG00000038831	NonProperStrand	24	1	-7.7315
chr12	4354395	4354439	protein_coding	Ncoa1	utr5	ENSMUSG00000020647	ProperStrand	38	chr17	34324656	34324673	protein_coding	Psmb9	utr5	ENSMUSG00000024337	ProperStrand	60	1	-14.2427
chr12	60269924	60269972	protein_coding	Ctage5	exon	ENSMUSG00000021000	ProperStrand	35	chr4	131865862	131865953	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	8	-inf
chr19	57115471	57115487	protein_coding-noncoding	Ablim1	utr3	ENSMUSG00000025085	ProperStrand	20	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-11.1511
chr19	8798160	8798190	lincRNA	Snhg1	exon	ENSMUSG00000090867	ProperStrand	100	chr16	23111754	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.1554
chr17	23897845	23897862	protein_coding	Flywch1	exon	ENSMUSG00000040097	ProperStrand	15	chr2	145076804	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-10.5332
chr13	23643321	23643458	protein_coding	Hist1h4f	exon	ENSMUSG00000069274	ProperStrand	28	chr3	123210854	123210954	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-5.8327
chr8	72287172	72287188	protein_coding	Zfp866	utr3	ENSMUSG00000043090	NonProperStrand	134	chr2	144419963	144419981	protein_coding	Gm561	intron	ENSMUSG00000074754	NonProperStrand	6	1	-16.4558
chr1	173433192	173433282	protein_coding	B930036N10Rik	utr3	ENSMUSG00000091993	ProperStrand	150	chr2	26493415	26493475	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-3.8142
chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	chr18	73693085	73693107	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-2.3520
chr17	45705312	45705392	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr3	84618963	84619053	protein_coding	Arfip1	intron	ENSMUSG00000074513	NonProperStrand	56	1	-6.8670
chr9	15130867	15131005	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	chr11	98878344	98878413	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	2	-4.3155
chr8	74955297	74955343	protein_coding	Calr3	exon	ENSMUSG00000019732	ProperStrand	8	chr7	54110637	54110737	protein_coding	Ldha	utr3	ENSMUSG00000063229	ProperStrand	280	5	-19.8369
chr10	80949932	80949948	protein_coding	Ncln	utr3	ENSMUSG00000020238	NonProperStrand	18	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-11.3672
chr1	138164860	138164950	protein_coding	Camsap2	utr3	ENSMUSG00000041570	ProperStrand	19	chr7	54110630	54110710	protein_coding	Ldha	utr3	ENSMUSG00000063229	ProperStrand	280	1	-12.5595
chr8	3634493	3634583	protein_coding	Stxbp2	exon	ENSMUSG00000004626	ProperStrand	19	chr3	123210885	123210975	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-4.1309
chr2	179322379	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr6	138104866	138104882	protein_coding	Mgst1	exon	ENSMUSG00000008540	ProperStrand	1	1	-inf
chr18	39581203	39582156	protein_coding	Nr3c1	exon	ENSMUSG00000024431	ProperStrand	13	chr8	32260372	32260422	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-7.6754
chr2	32485803	32485863	protein_coding	Ak1	exon	ENSMUSG00000026817	ProperStrand	33	chr10	90581048	90581138	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-5.9768
chr13	30338190	30338206	protein_coding	Mboat1	utr3	ENSMUSG00000038732	NonProperStrand	148	chr4	62088799	62088899	protein_coding	Rnf183	utr3	ENSMUSG00000063851	NonProperStrand	1	1	-inf
chr17	40614169	40614186	LINE	MusHAL1	L1	chr17MusHAL140613808	ProperStrand	1	chr17	56207706	56207821	protein_coding	Ubxn6	utr3	ENSMUSG00000019578	NonProperStrand	32	1	-inf
chr5	136707644	136707662	protein_coding	Sh2b2	exon	ENSMUSG00000005057	NonProperStrand	101	chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	1	-8.4461
chr17	25421253	25421333	LTR	RLTR23	ERV1	chr17RLTR2325421164	NonProperStrand	1	chr17	25421040	25421130	LTR	RMER6A	ERVK	chr17RMER6A25420706	NonProperStrand	1	1	-inf
chr4	41673405	41673421	protein_coding	Il11ra1	intron	ENSMUSG00000073889	ProperStrand	128	chr5	108334195	108334295	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-3.3949
chr5	34692681	34692698	protein_coding	Rnf4	exon	ENSMUSG00000029110	NonProperStrand	9	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-15.5738
chr11	3584672	3584864	protein_coding	Morc2a	exon	ENSMUSG00000034543	ProperStrand	62	chr11	6428125	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.1331
chr17	29106349	29106398	protein_coding	Kctd20	utr3	ENSMUSG00000005936	ProperStrand	21	chr18	33954874	33954953	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-9.0863
chr8	86505074	86505157	protein_coding	Prkaca	exon	ENSMUSG00000005469	ProperStrand	17	chr11	48619108	48619129	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	2	-23.7244
chr10	17933816	17933832	protein_coding	Ccdc28a	utr3	ENSMUSG00000059554	NonProperStrand	14	chr16	23111448	23111501	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.7143
chr8	87369959	87370176	protein_coding	Calr	exon	ENSMUSG00000003814	ProperStrand	232	chr4	56910496	56910550	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	2	-5.9728
chr11	69481391	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	NonProperStrand	24	chr16	23110910	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	NonProperStrand	93	3	-inf
chr7	148072437	148072724	protein_coding	Psmd13	exon	ENSMUSG00000025487	ProperStrand	16	chr16	23110911	23111001	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-10.5245
chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr4	126559848	126566767	protein_coding	Zmym4	exon	ENSMUSG00000042446	ProperStrand	94	1	-5.5718
chr11	62416578	62416658	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	chr8	73419656	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	21	-1.0271
chr15	98356776	98356913	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	chr11	69483136	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	15	-4.9448
chr11	100325695	100333527	protein_coding	Klhl11	exon	ENSMUSG00000048732	ProperStrand	8	chr11	35853255	35853271	protein_coding	Odz2	exon	ENSMUSG00000049336	ProperStrand	106	1	-16.2765
chr4	128867196	128867212	protein_coding	Yars	exon	ENSMUSG00000028811	ProperStrand	131	chr13	49779720	49779746	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-5.4766
chr13	67888112	67888128	protein_coding	Zfp493	utr3	ENSMUSG00000090659	ProperStrand	1	chr2	32818803	32818883	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-inf
chr2	46721897	46721915	LINE	Lx8	L1	chr2Lx846721569	ProperStrand	1	chr17	35088969	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-inf
chr11	69375288	69375378	protein_coding	Wrap53	exon	ENSMUSG00000041346	ProperStrand	14	chr1	88252836	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-9.5813
chr2	6362105	6362158	protein_coding	Usp6nl	exon	ENSMUSG00000039046	ProperStrand	59	chr16	23110455	23110524	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	6	-14.4322
mmu-miR-6240	2	26	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr13	95223812	95223828	protein_coding	Ap3b1	intron	ENSMUSG00000021686	NonProperStrand	24	1	-7.7315
chr4	62020145	62020188	protein_coding	Fkbp15	intron	ENSMUSG00000066151	ProperStrand	10	chr16	10559768	10559805	protein_coding	Clec16a	exon	ENSMUSG00000068663	ProperStrand	24	4	-inf
chr6	120745404	120745496	protein_coding	Atp6v1e1	utr3	ENSMUSG00000019210	ProperStrand	22	chr11	69481384	69481464	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.1045
chr13	9169900	9169958	protein_coding	Larp4b	exon	ENSMUSG00000033499	ProperStrand	53	chr5	130300496	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	5	-12.4352
chr7	51828028	51828044	protein_coding	Napsa	exon	ENSMUSG00000002204	ProperStrand	88	chr4	153393538	153393569	protein_coding	Lrrc47	exon	ENSMUSG00000029028	ProperStrand	30	1	-13.9485
chr18	16933117	16966848	protein_coding	Cdh2	exon	ENSMUSG00000024304	ProperStrand	71	chr4	122970392	122970449	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-7.0798
chr14	123067859	123084191	protein_coding	Pcca	exon	ENSMUSG00000041650	ProperStrand	13	chr4	116826727	116826764	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	6	-19.7247
chr12	44844017	44844161	snoRNA	ENSMUSG00000065004_SNORA33	.	ENSMUSG00000065004	ProperStrand	111	chr10	23505152	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	13	-18.1513
chr6	117129072	117129089	protein_coding	Cxcl12	utr3	ENSMUSG00000061353	NonProperStrand	6	chr9	15119738	15119766	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-7.1405
chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	chr17	88036097	88036155	protein_coding	Epcam	utr5	ENSMUSG00000045394	ProperStrand	43	1	-9.8795
chr9	63066908	63066926	protein_coding	Map2k5	intron	ENSMUSG00000058444	NonProperStrand	79	chr3	123210938	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.6347
chr3	88788594	88788625	protein_coding	Ash1l	exon	ENSMUSG00000028053	ProperStrand	30	chr11	62416605	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-6.5327
chr1	182926164	182926264	protein_coding	Ephx1	exon	ENSMUSG00000038776	ProperStrand	26	chr16	23111753	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.3497
chr11	74537614	74537704	protein_coding	Pafah1b1	utr5	ENSMUSG00000020745	ProperStrand	20	chr19	8963087	8963167	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.2716
chr12	55847898	55847999	protein_coding	Snx6	utr3	ENSMUSG00000005656	ProperStrand	9	chr9	120038495	120038528	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-6.7394
chr2	119786141	119786515	protein_coding	Mga	exon	ENSMUSG00000033943	ProperStrand	180	chrX	34622958	34623018	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-1.3713
chr17	6009601	6009621	protein_coding	Synj2	intron	ENSMUSG00000023805	NonProperStrand	3	chr9	15130906	15131005	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	2	-inf
chr11	49698817	49698907	protein_coding	Mapk9	utr3	ENSMUSG00000020366	ProperStrand	20	chr7	116663634	116663714	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.5385
chr8	83312947	83312987	protein_coding	Gab1	exon	ENSMUSG00000031714	ProperStrand	72	chr16	23110527	23110584	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.1562
chr8	80134367	80134432	protein_coding	Tmem184c	utr5	ENSMUSG00000031617	ProperStrand	5	chr9	120038589	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-8.0049
chr8	13558670	13558772	protein_coding	1700029H14Rik	exon	ENSMUSG00000031452	ProperStrand	19	chr1	88247816	88247876	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-7.3815
chr10	75389299	75389347	protein_coding	Mmp11	exon	ENSMUSG00000000901	ProperStrand	24	chr13	97419849	97419868	protein_coding	Hmgcr	utr3	ENSMUSG00000021670	ProperStrand	56	2	-19.9294
chr2	90235285	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	126703409	126703426	protein_coding	Sfpq	exon	ENSMUSG00000028820	ProperStrand	340	3	-4.2683
chr9	120038674	120039626	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	NonProperStrand	24	chr9	120037900	120037981	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	NonProperStrand	19	1	-17.3644
chr5	100855902	100855974	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr17	35299565	35299642	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	5	-1.6246
chr17	24858160	24858580	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr19	8798493	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-1.9097
chr4	109105596	109105613	protein_coding	Ttc39a	exon	ENSMUSG00000028555	ProperStrand	51	chr8	73419703	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-5.8511
chr10	57955297	57955830	protein_coding	Ranbp2	exon	ENSMUSG00000003226	ProperStrand	52	chr17	24857740	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	4	-9.1711
chr4	133686862	133686952	protein_coding	Ccdc21	utr3	ENSMUSG00000037443	ProperStrand	112	chr19	8963044	8963124	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.3124
chr17	32518035	32524524	protein_coding	Wiz	exon	ENSMUSG00000024050	ProperStrand	26	chr7	52381972	52382012	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-8.3878
chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	3	-3.8920
chr9	60704005	60704022	protein_coding	Uaca	exon	ENSMUSG00000034485	ProperStrand	109	chr10	39978345	39978401	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-4.3095
chr10	69451979	69452069	protein_coding	Ank3	intron	ENSMUSG00000069601	ProperStrand	76	chr5	130300437	130300517	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.1136
chr9	113563855	113563955	protein_coding	Pdcd6ip	utr3	ENSMUSG00000032504	ProperStrand	53	chr16	23110909	23110964	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-2.7196
chr19	6531460	6531478	protein_coding	Nrxn2	exon	ENSMUSG00000033768	ProperStrand	19	chr11	6428049	6428088	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.3857
chr19	47372000	47372018	protein_coding	Sh3pxd2a	intron	ENSMUSG00000053617	ProperStrand	57	chr4	131866166	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	3	-9.2601
chr3	82816757	82816774	protein_coding	Fgg	exon	ENSMUSG00000033860	NonProperStrand	321	chr11	98878383	98878467	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	3	-7.8228
chr2	164250287	164250307	protein_coding	Sdc4	utr3	ENSMUSG00000017009	ProperStrand	177	chr15	63961730	63967388	protein_coding	Asap1	exon	ENSMUSG00000022377	ProperStrand	29	1	-12.6141
chr17	53071061	53071078	LINE	L1_Mus4	L1	chr17L1_Mus453067946	NonProperStrand	21	chr13	51743567	51743645	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-8.9714
chr7	67123731	67123753	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	chr11	58115675	58115750	tRNA	tRNA1912-GluCTC	.	1572083	ProperStrand	12	1	-12.8215
chr8	128015253	128015309	protein_coding	Sipa1l2	exon	ENSMUSG00000001995	ProperStrand	37	chr14	76247793	76247828	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-8.4175
chr14	77424372	77424388	protein_coding	9030625A04Rik	utr3	ENSMUSG00000044350	NonProperStrand	152	chr6	71832629	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-3.8313
chr16	94792011	94792072	protein_coding	Dyrk1a	utr5	ENSMUSG00000022897	ProperStrand	17	chr5	32657192	32657208	protein_coding	Plb1	exon	ENSMUSG00000029134	ProperStrand	50	1	-16.2518
chr14	119371688	119371972	protein_coding	Dnajc3	exon	ENSMUSG00000022136	ProperStrand	10	chr8	129468746	129468766	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-7.9945
chr18	64328476	64328492	antisense	1700091E21Rik	.	ENSMUSG00000086128	NonProperStrand	35	chr2	166890502	166890556	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-8.6385
chr13	51743567	51743652	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	chr19	8799022	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	4	-2.9295
chr17	45705979	45708419	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr7	148634702	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	5	-0.7054
chr1	155287305	155287355	snoRNA	ENSMUSG00000064435_SNORA4	.	ENSMUSG00000064435	ProperStrand	263	chr18	35716703	35716853	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	5	-3.1318
chr15	81825205	81828569	protein_coding	Pppde2	exon	ENSMUSG00000022472	ProperStrand	12	chr16	23110985	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.4686
chr9	50816824	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	chr4	131866155	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	3	-6.2237
chr12	110786290	110786331	lincRNA	Meg3	intron	ENSMUSG00000021268	ProperStrand	61	chr8	73419696	73419786	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.1005
chr16	34768459	34768476	protein_coding	Mylk	intron	ENSMUSG00000022836	ProperStrand	19	chr4	131908837	131908890	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.0948
chr12	100101494	100103515	protein_coding	Eml5	exon	ENSMUSG00000051166	ProperStrand	26	chr11	6428033	6428133	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.7683
chr2	49725866	49725884	protein_coding	Lypd6b	intron	ENSMUSG00000026765	ProperStrand	6	chr9	15118244	15118264	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-8.0740
chr6	122685551	122685614	protein_coding	Slc2a3	exon	ENSMUSG00000003153	ProperStrand	682	chr2	26493361	26493451	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	9	-7.6606
chr18	38749671	38749755	protein_coding	Spry4	exon	ENSMUSG00000024427	ProperStrand	24	chr11	97642658	97642691	protein_coding	Rpl23	exon	ENSMUSG00000071415	ProperStrand	920	1	-9.7037
chr19	5365825	5365859	protein_coding	Banf1	exon	ENSMUSG00000024844	ProperStrand	34	chr6	124665483	124665521	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	2	-12.8946
chr7	149170854	149171339	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	chr19	8963027	8963166	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-0.7993
chr4	133827853	133827943	SINE	B1_Mur1	Alu	chr4B1_Mur1133827864	ProperStrand	1	chr4	133828216	133828306	SINE	ID_B1	B4	chr4ID_B1133828125	NonProperStrand	1	1	-inf
chr13	51743581	51743661	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	chrX	71517833	71517923	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	3	-2.9332
chr18	63839145	63841882	protein_coding	Txnl1	exon	ENSMUSG00000024583	ProperStrand	7	chr2	4829164	4829180	protein_coding	Sephs1	utr3	ENSMUSG00000026662	NonProperStrand	271	1	-14.7217
chr17	24858594	24858627	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr4	130305568	130305619	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	3	-14.3257
chr1	162965528	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	17	-2.2881
chr8	86496961	86497043	protein_coding	Prkaca	utr5	ENSMUSG00000005469	ProperStrand	17	chr2	18508668	18508718	tRNA	tRNA1947-AsnGTT	.	1838085	ProperStrand	179	1	-13.6803
chr16	4693220	4693308	protein_coding	Dnaja3	exon	ENSMUSG00000004069	ProperStrand	13	chr5	130300460	130300550	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	5	-inf
chr15	98483050	98483151	protein_coding-noncoding	Ddx23	utr3	ENSMUSG00000003360	ProperStrand	3	chr17	24857773	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-8.3442
chr11	51551404	51551433	protein_coding	Sec24a	intron	ENSMUSG00000036391	ProperStrand	42	chr12	17552953	17553045	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	2	-9.4486
chrX	149934432	149934459	protein_coding	Ubqln2	exon	ENSMUSG00000050148	ProperStrand	12	chr16	23110941	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.4686
chr15	99256421	99256437	protein_coding	Nckap5l	exon	ENSMUSG00000023009	ProperStrand	51	chr7	29136525	29136561	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.6434
chr2	32819267	32819307	protein_coding	Rpl12	exon	ENSMUSG00000038900	ProperStrand	167	chr19	8800401	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-3.2498
mmu-miR-5136	0	19	miRNA	mmu-miR-5136	.	mmu-miR-5136	ProperStrand	1	chr12	17552950	17553032	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-inf
chr11	62366017	62366112	protein_coding	Ubb	exon	ENSMUSG00000019505	ProperStrand	32	chr1	187076213	187079629	protein_coding	Rab3gap2	exon	ENSMUSG00000039318	ProperStrand	41	3	-inf
chr7	3526412	3526519	LINE	Lx8	L1	chr7Lx83526409	NonProperStrand	2	chr11	106362339	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-13.2734
chr11	48630051	48630140	protein_coding	Trim41	exon	ENSMUSG00000040365	ProperStrand	11	chr15	101262795	101263537	protein_coding	Krt83	exon	ENSMUSG00000047641	ProperStrand	1	1	-inf
chr1	186696875	186696965	protein_coding	C130074G19Rik	utr3	ENSMUSG00000039349	ProperStrand	4	chr4	131908790	131908870	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-6.2660
chr13	12504322	12504346	protein_coding	Heatr1	exon	ENSMUSG00000050244	ProperStrand	74	chr11	77996592	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-5.6801
chr4	131908232	131908466	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr7	116663633	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	12	-1.6755
chr18	85128461	85128551	protein_coding	Fbxo15	exon	ENSMUSG00000034391	ProperStrand	23	chr4	131865856	131865936	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.4190
chrX	93136011	93136027	protein_coding	Las1l	exon	ENSMUSG00000057421	ProperStrand	248	chr19	8798484	8798501	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-2.5832
chr3	101388689	101388757	protein_coding	Atp1a1	exon	ENSMUSG00000033161	ProperStrand	316	chr17	35299550	35299640	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	11	-inf
chr1	169249429	169256051	protein_coding	Tmco1	exon	ENSMUSG00000052428	ProperStrand	16	chr2	29917649	29917739	protein_coding	Set	utr5	ENSMUSG00000054766	ProperStrand	167	1	-13.9480
chr14	76247720	76247810	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	chr8	113366286	113366354	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	2	-1.6785
chr2	32563527	32563545	protein_coding	Cdk9	exon	ENSMUSG00000009555	NonProperStrand	49	chr12	87030317	87049503	protein_coding	Batf	exon	ENSMUSG00000034266	ProperStrand	28	1	-15.2685
chr5	138608438	138608455	protein_coding	Mcm7	exon	ENSMUSG00000029730	NonProperStrand	10	chr16	23110828	23110903	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.7978
chr11	3113334	3115678	protein_coding	Eif4enif1	exon	ENSMUSG00000020454	ProperStrand	575	chr7	53435372	53435389	protein_coding	Abcc8	utr5	ENSMUSG00000040136	ProperStrand	15	1	-11.6068
chr4	63389601	63389618	protein_coding	Tnfsf15	utr3	ENSMUSG00000050395	NonProperStrand	121	chr11	6428054	6428088	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.9893
chr7	114588571	114588596	protein_coding	Syt9	intron	ENSMUSG00000062542	NonProperStrand	6	chr16	23110826	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.7876
chr5	149988650	149988673	lincRNA	5730422E09Rik	intron	ENSMUSG00000086085	NonProperStrand	9	chr9	15119967	15119993	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-11.1264
chr5	135092504	135092594	SINE	B2_Mm1a	B2	chr5B2_Mm1a135092386	ProperStrand	1	chr5	135092653	135092743	SINE	PB1D9	Alu	chr5PB1D9135092651	NonProperStrand	1	1	-inf
chr14	67651299	67651389	protein_coding	Ppp2r2a	intron	ENSMUSG00000022052	NonProperStrand	5	chr2	124970621	124970701	protein_coding	Ctxn2	intron	ENSMUSG00000074872	ProperStrand	1	1	-inf
chr3	52388277	52388294	SINE	B4A	B4	chr3B4A52388218	ProperStrand	169	chr4	128295754	128295770	protein_coding	Tlr12	utr5	ENSMUSG00000062545	NonProperStrand	8	1	-15.3669
chr16	58466722	58466759	protein_coding	Dcbld2	utr3	ENSMUSG00000035107	ProperStrand	56	chr7	150717298	150717415	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-5.6418
chr6	31427852	31427942	protein_coding	Mkln1	intron	ENSMUSG00000025609	ProperStrand	18	chr16	23110914	23110994	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-9.7548
mmu-miR-466i-5p	0	16	miRNA	mmu-miR-466i-5p	.	mmu-miR-466i-5p	NonProperStrand	3	chr2	26494707	26494827	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-9.2771
chr12	88778631	88778738	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	chr2	158182154	158182257	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	8	-4.2839
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr5	74489594	74489676	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	5	-3.8974
chr11	54733986	54734006	protein_coding	Tnip1	intron	ENSMUSG00000020400	NonProperStrand	2	chr3	123210917	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-9.1566
chr3	86152445	86152487	protein_coding	Lrba	exon	ENSMUSG00000028080	ProperStrand	39	chr17	35089181	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	3	-14.5203
chr7	5041688	5041705	protein_coding	Epn1	exon	ENSMUSG00000035203	ProperStrand	15	chr16	23111384	23111418	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.5828
chr3	103403656	103403674	protein_coding	Syt6	intron	ENSMUSG00000027849	ProperStrand	4	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.0048
chr4	148494136	148494153	protein_coding	Dffa	utr3	ENSMUSG00000028974	ProperStrand	55	chr1	135147552	135147568	protein_coding	Plekha6	intron	ENSMUSG00000041757	NonProperStrand	40	1	-14.3058
chr18	42381246	42385427	protein_coding	Lars	exon	ENSMUSG00000024493	ProperStrand	69	chr4	116827129	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	8	-19.8498
chr17	45707739	45708012	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr12	101623903	101624003	protein_coding	Ttc7b	intron	ENSMUSG00000033530	ProperStrand	49	1	-7.1328
chr19	10139902	10140002	protein_coding	Fads2	intron	ENSMUSG00000024665	NonProperStrand	1	chr8	73419703	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	NonProperStrand	53	1	-inf
chr9	70323692	70323782	protein_coding	Rnf111	exon	ENSMUSG00000032217	ProperStrand	33	chr7	117189941	117190021	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.4547
chr5	64669173	64669213	protein_coding	Tbc1d1	exon	ENSMUSG00000029174	ProperStrand	44	chr9	120039538	120039622	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-6.5719
chr2	181304328	181304412	protein_coding-noncoding	Uckl1	utr3	ENSMUSG00000089917	ProperStrand	1	chr2	165904588	165904616	protein_coding	Sulf2	exon	ENSMUSG00000006800	ProperStrand	171	1	-inf
chr10	80330436	80330516	protein_coding	3110056O03Rik	utr3	ENSMUSG00000035206	NonProperStrand	7	chr16	23110901	23111001	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	NonProperStrand	93	1	-16.8121
mmu-miR-5099	0	20	miRNA	mmu-miR-5099	.	mmu-miR-5099	ProperStrand	5	chr17	24857724	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	3	-17.1693
chr9	115151811	115151829	protein_coding	Stt3b	utr3	ENSMUSG00000032437	ProperStrand	66	chr16	23109040	23109093	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-7.0921
chr12	109440347	109440427	protein_coding	Ccnk	exon	ENSMUSG00000021258	ProperStrand	31	chr5	92485083	92485173	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	1	-10.0701
chr7	139430077	139430094	protein_coding	Chst15	exon	ENSMUSG00000030930	ProperStrand	20	chr11	106362303	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-8.0393
chr4	148859633	148859689	protein_coding	Lzic	utr5	ENSMUSG00000028990	ProperStrand	9	chr17	35087894	35087940	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-9.0335
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr8	47028009	47028025	protein_coding	Ccdc110	exon	ENSMUSG00000071104	NonProperStrand	6	1	-13.6873
chr11	62143008	62143032	protein_coding	Ncor1	exon	ENSMUSG00000018501	ProperStrand	132	chr11	62418014	62418036	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-4.0432
chr12	110881093	110881114	lincRNA	Rian	intron	ENSMUSG00000091793	ProperStrand	612	chr7	67123714	67123759	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	1	-4.9526
chr2	90235298	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	2	-3.0183
chr9	24252267	24255158	protein_coding	Dpy19l1	exon	ENSMUSG00000043067	ProperStrand	24	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.9196
chr7	148634702	148634839	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	chr12	92811869	92812014	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	2	-0.9585
chr2	24825186	24827046	protein_coding	Wdr85	exon	ENSMUSG00000026975	ProperStrand	323	chr15	98571861	98573047	protein_coding	Arf3	exon	ENSMUSG00000051853	ProperStrand	41	1	-10.7079
chr6	39507397	39507415	protein_coding	Dennd2a	intron	ENSMUSG00000038456	ProperStrand	13	chr5	130300532	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-5.3899
chr2	73747429	73747956	protein_coding	Atp5g3	exon	ENSMUSG00000018770	ProperStrand	41	chr7	129145307	129145328	protein_coding	Gga2	intron	ENSMUSG00000030872	NonProperStrand	4	1	-21.8874
chr4	6917649	6917667	protein_coding	Tox	utr5	ENSMUSG00000041272	ProperStrand	7	chr16	23111703	23111777	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.9463
chr5	74489263	74489328	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr9	57291357	57291375	protein_coding	Scamp5	utr3	ENSMUSG00000040722	ProperStrand	12	1	-8.8641
chr3	108481458	108481515	protein_coding	Clcc1	utr3	ENSMUSG00000027884	NonProperStrand	3	chr11	77996557	77996619	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-12.4287
chr12	4206932	4208588	protein_coding	Adcy3	exon	ENSMUSG00000020654	ProperStrand	33	chr4	131908689	131908792	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.1302
chr7	31147535	31147552	protein_coding	Lrfn3	utr5	ENSMUSG00000036957	ProperStrand	1	chr7	51505822	51505841	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	1	-inf
chr2	38012954	38012970	protein_coding	Dennd1a	intron	ENSMUSG00000035392	NonProperStrand	128	chr1	162966812	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-4.7823
chr17	20055644	20055724	LTR	IAPEz-int	ERVK	chr17IAPEz-int20054751	ProperStrand	1	chr17	20055802	20055892	LTR	IAPLTR2b	ERVK	chr17IAPLTR2b20055714	ProperStrand	1	1	-inf
chr2	9985901	9985917	protein_coding	Atp5c1	exon	ENSMUSG00000025781	ProperStrand	138	chr16	3856861	3856878	protein_coding	Zfp174	utr3	ENSMUSG00000054939	NonProperStrand	166	1	-9.6005
chr19	10621087	10621134	protein_coding	Cpsf7	utr3	ENSMUSG00000034820	ProperStrand	66	chr10	23505152	23505253	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-2.1655
chr9	62225923	62225998	protein_coding	Anp32a	utr3	ENSMUSG00000032249	ProperStrand	75	chr7	116664816	116664916	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.1729
chr1	174065395	174065427	protein_coding	Pex19	utr3	ENSMUSG00000003464	ProperStrand	1	chr3	123210854	123210979	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-inf
chr18	33157688	33157705	protein_coding	Camk4	intron	ENSMUSG00000038128	NonProperStrand	42	chr3	123210924	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.6686
chr17	35826972	35827062	protein_coding	Ddr1	exon	ENSMUSG00000003534	ProperStrand	129	chr2	130101991	130102071	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-3.8932
chr5	37186342	37186442	protein_coding	Mrfap1	utr3	ENSMUSG00000055302	ProperStrand	62	chr1	162965983	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-3.5427
chr11	80965641	80965658	protein_coding	Accn1	exon	ENSMUSG00000020704	NonProperStrand	228	chr8	49210392	49210464	protein_coding	Dctd	intron	ENSMUSG00000031562	ProperStrand	10	2	-19.6657
chr2	16278620	16278639	protein_coding	Plxdc2	utr5	ENSMUSG00000026748	NonProperStrand	44	chr11	69481335	69481433	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	4	-12.4666
chr10	117146804	117147045	protein_coding	Mdm2	utr5	ENSMUSG00000020184	ProperStrand	17	chr6	148870499	148870589	protein_coding	Fam60a	utr3	ENSMUSG00000039985	ProperStrand	68	2	-inf
chr7	148636985	148637179	protein_coding	Rplp2	exon	ENSMUSG00000025508	ProperStrand	106	chr6	146499317	146499347	protein_coding	4933424B01Rik	intron	ENSMUSG00000040250	ProperStrand	11	2	-inf
chr14	57204539	57204555	protein_coding	Parp4	exon	ENSMUSG00000054509	NonProperStrand	113	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.1758
chr17	39979976	39980076	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr5	112865460	112865478	protein_coding	Sez6l	exon	ENSMUSG00000058153	ProperStrand	81	1	-6.6277
chr17	32453268	32453285	protein_coding	Akap8	exon	ENSMUSG00000024045	ProperStrand	339	chr3	68889098	68889369	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	4	-3.4373
chr11	97034480	97034552	protein_coding	Kpnb1	exon	ENSMUSG00000001440	ProperStrand	197	chr9	15118322	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-1.4755
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr2	26494706	26494842	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	9	-3.1242
chr11	116165245	116165266	protein_coding	Exoc7	intron	ENSMUSG00000020792	ProperStrand	24	chrX	71517821	71517904	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-8.3819
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr13	93924840	93924898	protein_coding	Papd4	intron	ENSMUSG00000042167	ProperStrand	19	1	-9.3450
chrX	23297032	23297123	protein_coding	Wdr44	intron	ENSMUSG00000036769	ProperStrand	18	chr15	34370544	34370636	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	12	-21.2532
chr9	15124067	15124092	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	NonProperStrand	100	chr3	108228259	108228275	protein_coding	Sars	utr3	ENSMUSG00000068739	NonProperStrand	200	1	-9.8727
chrX	34687897	34687917	protein_coding	Nkap	exon	ENSMUSG00000016409	ProperStrand	4	chr17	35089181	35089227	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-11.1133
chr19	46077962	46077980	lincRNA	4930505N22Rik	intron	ENSMUSG00000090325	NonProperStrand	2	mmu-miR-3535	0	18	miRNA	mmu-miR-3535	.	mmu-miR-3535	ProperStrand	15	1	-inf
chr4	115796146	115796236	protein_coding	Rad54l	utr5	ENSMUSG00000028702	ProperStrand	19	chr7	29136524	29136604	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-7.5039
chr10	126486853	126486872	protein_coding	Cyp27b1	exon	ENSMUSG00000006724	ProperStrand	3	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-14.1023
chr13	24565879	24565969	protein_coding	Cmah	utr3	ENSMUSG00000016756	NonProperStrand	53	chr14	124431533	124431623	protein_coding	Fgf14	intron	ENSMUSG00000025551	NonProperStrand	9	1	-17.3515
chr17	31610289	31610333	protein_coding	Pde9a	intron	ENSMUSG00000041119	ProperStrand	16	chr12	88778630	88778719	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	2	-14.5976
chr7	30231485	30231593	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	chr11	83254019	83254035	protein_coding	1700020L24Rik	exon	ENSMUSG00000035085	NonProperStrand	88	2	-12.8848
chr7	25673362	25673405	protein_coding	Rps19	exon	ENSMUSG00000040952	ProperStrand	101	chr4	131908266	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.7531
chr1	10141947	10143475	protein_coding	Arfgef1	exon	ENSMUSG00000067851	NonProperStrand	27	chr4	130305550	130305579	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	1	-11.5236
chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	chr6	145564547	145564563	protein_coding	Tuba3b	utr5	ENSMUSG00000067338	ProperStrand	152	1	-9.8206
chr1	38074663	38074724	protein_coding	Eif5b	exon	ENSMUSG00000026083	ProperStrand	118	chr5	37667536	37667552	protein_coding	Crmp1	exon	ENSMUSG00000029121	ProperStrand	85	1	-11.2548
chr10	59762557	59762647	protein_coding	Psap	exon	ENSMUSG00000004207	ProperStrand	124	chr12	55797770	55797850	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	1	-6.2585
chr4	43505723	43505813	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr19	29669335	29669398	protein_coding	C030046E11Rik	exon	ENSMUSG00000038658	ProperStrand	104	4	-7.9599
chr11	98555522	98555563	protein_coding	Psmd3	exon	ENSMUSG00000017221	ProperStrand	51	chr7	29136603	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	4	-9.4545
chr11	98064935	98065035	protein_coding	Cdk12	exon	ENSMUSG00000003119	ProperStrand	50	chr1	162967537	162967566	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-3.8126
chr11	4971148	4971583	protein_coding	Ewsr1	exon	ENSMUSG00000009079	ProperStrand	248	chr2	32530722	32530770	snoRNA	ENSMUSG00000093277_AL772271.2	.	ENSMUSG00000093277	ProperStrand	23	3	-19.0163
chr5	5314260	5314277	protein_coding	Cdk14	intron	ENSMUSG00000028926	NonProperStrand	23	chr2	130102056	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-7.2605
chr9	21202538	21203639	protein_coding	Ilf3	exon	ENSMUSG00000032178	ProperStrand	164	chr4	131908689	131908808	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	9	-7.0659
chr3	105746744	105754513	protein_coding	Atp5f1	exon	ENSMUSG00000000563	ProperStrand	28	chr4	131865383	131865473	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-5.4736
chr11	61111322	61111402	LTR	RLTR15	ERVK	chr11RLTR1561111321	NonProperStrand	1	chr11	29774533	29774623	protein_coding	Eml6	intron	ENSMUSG00000044072	NonProperStrand	8	1	-inf
chr1	181476147	181476163	protein_coding	Tfb2m	exon	ENSMUSG00000026492	ProperStrand	5	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-15.5639
chr18	35813218	35813234	protein_coding	Gm1614	exon	ENSMUSG00000073600	NonProperStrand	3	chr17	35088969	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-12.1990
chr7	25397593	25397611	protein_coding	Phldb3	exon	ENSMUSG00000074277	ProperStrand	25	chr2	26494798	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.7537
chrX	35918234	35918278	protein_coding	Cul4b	utr5	ENSMUSG00000031095	ProperStrand	31	chr11	97642982	97643072	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.6570
chr2	26493362	26493393	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr7	106628081	106628180	snoRNA	ENSMUSG00000064966_Snord15b	.	ENSMUSG00000064966	ProperStrand	74	1	-5.7821
chr5	80416066	80416156	LINE	Lx	L1	chr5Lx80415982	ProperStrand	1	chr6	41136028	41136108	LINE	Lx2	L1	chr6Lx241135886	ProperStrand	1	1	-inf
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr7	16524112	16524179	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	1	-4.7873
chr7	86812732	86814371	protein_coding	5730590G19Rik	exon	ENSMUSG00000046591	ProperStrand	45	chr9	15119646	15119726	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.1394
chr2	167124258	167124276	protein_coding	B4galt5	utr3	ENSMUSG00000017929	ProperStrand	22	chr4	131908236	131908332	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-7.9529
chr11	50114481	50115274	protein_coding	Canx	exon	ENSMUSG00000020368	ProperStrand	296	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-2.2844
chr5	35421774	35421790	protein_coding	Dok7	exon	ENSMUSG00000044716	NonProperStrand	5	chr5	108334206	108334267	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-9.9148
chr2	165904622	165904638	protein_coding	Sulf2	exon	ENSMUSG00000006800	ProperStrand	171	chr18	73693085	73693107	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-3.5312
chr6	89285477	89287150	protein_coding	Plxna1	exon	ENSMUSG00000030084	NonProperStrand	19	chr1	162967515	162967537	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-5.6883
chr7	74189892	74189909	protein_coding	Adamts17	intron	ENSMUSG00000058145	NonProperStrand	73	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-7.9879
chr15	31660474	31660491	LINE	Lx8	L1	chr15Lx831660395	ProperStrand	1	chr17	35087895	35087964	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-inf
chr9	78023109	78023195	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr6	91676185	91706115	protein_coding	Slc6a6	utr3	ENSMUSG00000030096	ProperStrand	206	7	-19.8258
chr6	6045160	6167004	protein_coding	Slc25a13	exon	ENSMUSG00000015112	ProperStrand	78	chr10	23505150	23505218	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	6	-7.5814
chr1	153667544	153667613	protein_coding	Edem3	utr3	ENSMUSG00000043019	ProperStrand	84	chr1	162968244	162968288	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-6.1515
chr19	40625751	40628045	protein_coding	Aldh18a1	exon	ENSMUSG00000025007	ProperStrand	19	chr9	120038611	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.2199
chr1	162966812	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	5	-1.7063
chr4	43505657	43505737	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr12	112779103	112779155	protein_coding	Eif5	intron	ENSMUSG00000021282	ProperStrand	125	3	-5.1227
chr6	6007379	6007469	protein_coding	Slc25a13	intron	ENSMUSG00000015112	ProperStrand	78	chr1	87983904	87983984	snoRNA	ENSMUSG00000077274_SNORA26	.	ENSMUSG00000077274	ProperStrand	361	1	-9.1919
chr9	15118325	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	chr10	30530980	30531021	tRNA	tRNA81-GluCTC	.	716581	ProperStrand	154	3	-5.1540
chr4	149021661	149021751	protein_coding	Clstn1	utr3	ENSMUSG00000039953	ProperStrand	173	chr11	113907544	113907560	protein_coding	Sdk2	intron	ENSMUSG00000041592	NonProperStrand	98	1	-10.2033
chr16	57391761	57391792	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr6	49200911	49200927	protein_coding	Tra2a	exon	ENSMUSG00000029817	ProperStrand	54	1	-8.0038
chr12	3358826	3358916	SINE	B1F1	Alu	chr12B1F13358791	NonProperStrand	1	chr12	3359026	3359106	SINE	B3	B2	chr12B33358953	NonProperStrand	1	1	-inf
chr3	104805428	104805468	protein_coding	Cttnbp2nl	utr3	ENSMUSG00000062127	ProperStrand	15	chr12	17552969	17553031	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-7.8562
chr7	31349806	31350119	antisense	Gm17104	.	ENSMUSG00000091271	ProperStrand	11	chr8	109577926	109577942	protein_coding	Cog8	exon	ENSMUSG00000031916	NonProperStrand	6	1	-19.1881
chr16	37384897	37384913	protein_coding	Stxbp5l	utr5	ENSMUSG00000022829	ProperStrand	332	chr11	106362672	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-4.0755
chr2	129998666	129998706	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr5	145532284	145532321	protein_coding	Trrap	intron	ENSMUSG00000045482	ProperStrand	399	1	-4.3988
chr11	72216645	72216735	protein_coding	Smtnl2	exon	ENSMUSG00000045667	ProperStrand	30	chr5	74489596	74489676	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-5.1050
chr4	139130806	139130886	protein_coding	Iffo2	utr5	ENSMUSG00000041025	ProperStrand	8	chr14	76372292	76372382	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	1	-13.1283
chr2	154710175	154713488	protein_coding	Eif2s2	exon	ENSMUSG00000074656	ProperStrand	96	chr11	77995189	77995253	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-5.2627
chr15	12479024	12479084	protein_coding	Pdzd2	utr5	ENSMUSG00000022197	ProperStrand	21	chr14	52829482	52829570	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	6	-inf
chr17	56201557	56201637	protein_coding	Chaf1a	exon	ENSMUSG00000002835	ProperStrand	23	chr5	130300452	130300542	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.2653
chr9	69972993	69973998	protein_coding	Fam81a	exon	ENSMUSG00000032224	ProperStrand	59	chr1	63225253	63225284	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	1	-8.8698
chr2	129998695	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr10	80641705	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	1	-2.5972
chr4	47398698	47398720	protein_coding	Tgfbr1	intron	ENSMUSG00000007613	NonProperStrand	1	chr7	57041565	57041581	protein_coding	Prmt3	exon	ENSMUSG00000030505	ProperStrand	89	1	-inf
chr7	30972154	30972254	protein_coding	Capns1	utr3	ENSMUSG00000001794	ProperStrand	35	chr1	162965533	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.2830
chr6	97136113	97136236	protein_coding	Uba3	exon	ENSMUSG00000030061	ProperStrand	37	chr7	116663666	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	5	-14.6259
chr17	25244302	25247173	protein_coding	Telo2	exon	ENSMUSG00000024170	ProperStrand	17	chr9	120038552	120038607	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.4412
chr8	9505656	9505673	protein_coding	Fam155a	intron	ENSMUSG00000079157	ProperStrand	15	chr4	131908820	131908871	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.5353
chr11	68799622	68799640	protein_coding	Pfas	utr3	ENSMUSG00000020899	ProperStrand	53	chrX	71495074	71495091	protein_coding	Flna	utr5	ENSMUSG00000031328	ProperStrand	134	1	-11.9500
chr11	83436753	83436844	lincRNA	E230016K23Rik	exon	ENSMUSG00000051832	ProperStrand	3	chr18	35716835	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-inf
chr5	109053249	109053267	protein_coding	Gak	intron	ENSMUSG00000062234	ProperStrand	33	chr1	162965531	162965554	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.3958
chr19	9952227	9952685	protein_coding	Incenp	exon	ENSMUSG00000024660	ProperStrand	111	chr2	92245207	92245224	protein_coding	Cry2	utr3	ENSMUSG00000068742	NonProperStrand	5	1	-17.1665
chr2	168580213	168580233	protein_coding	Sall4	exon	ENSMUSG00000027547	ProperStrand	82	chr15	5068414	5068480	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-5.4547
chr13	9833562	9833651	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr7	11311315	11314910	protein_coding	Nlrp4b	exon	ENSMUSG00000034087	ProperStrand	14	1	-7.8589
chr12	112565198	112565215	protein_coding	Cdc42bpb	intron	ENSMUSG00000021279	ProperStrand	128	chr11	68853907	68853960	tRNA	tRNA396-ProCGG	.	1818387	ProperStrand	48	1	-12.2419
chr9	50490151	50490214	protein_coding	Dixdc1	exon	ENSMUSG00000032064	ProperStrand	8	chr2	32818881	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-9.5623
chr12	70462370	70462473	misc_RNA	AC157822.1	.	ENSMUSG00000092773	ProperStrand	18	chr9	120039622	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	3	-13.2432
chr7	31013520	31013562	protein_coding	Tbcb	intron	ENSMUSG00000006095	ProperStrand	5	chr14	76247754	76247816	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-14.9764
chr6	129628834	129628851	protein_coding	Klrc1	exon	ENSMUSG00000030167	NonProperStrand	49	chr4	131908356	131908412	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.7204
chr5	75473198	75473215	protein_coding	Gsx2	utr3	ENSMUSG00000035946	ProperStrand	307	chr17	35087897	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-2.2142
chr11	33745818	33745834	protein_coding	Kcnip1	intron	ENSMUSG00000053519	ProperStrand	45	chr19	8963153	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.7687
chr14	51460950	51460966	protein_coding	Tep1	exon	ENSMUSG00000006281	ProperStrand	37	chr9	114333083	114333139	protein_coding	Glb1	exon	ENSMUSG00000045594	ProperStrand	67	1	-14.0606
chr7	57041565	57041581	protein_coding	Prmt3	exon	ENSMUSG00000030505	ProperStrand	89	chr8	126439214	126439234	protein_coding	Nup133	exon	ENSMUSG00000039509	ProperStrand	59	1	-12.5562
chr16	87419191	87419291	snoRNA	ENSMUSG00000065647_SNORA2	.	ENSMUSG00000065647	ProperStrand	123	chr18	35716810	35716885	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-2.1486
chr8	121070498	121070516	protein_coding	Cdh13	intron	ENSMUSG00000031841	ProperStrand	60	chr15	75738331	75738387	protein_coding	Eef1d	intron	ENSMUSG00000055762	ProperStrand	99	1	-12.3077
chr1	140382253	140382352	protein_coding	Nek7	utr3	ENSMUSG00000026393	ProperStrand	10	chr6	125115310	125115588	protein_coding	Gapdh	utr5	ENSMUSG00000057666	ProperStrand	356	1	-13.4123
chr12	21355708	21355790	protein_coding	Adam17	exon	ENSMUSG00000052593	ProperStrand	20	chr7	148634777	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	6	-inf
chr2	10150497	10150513	protein_coding	Itih5	intron	ENSMUSG00000025780	NonProperStrand	12	chr19	8963028	8963085	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.2811
chr14	65361196	65361215	protein_coding	Kif13b	exon	ENSMUSG00000060012	NonProperStrand	6	chr17	35299507	35299622	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	2	-15.2504
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr17	35286225	35286250	protein_coding	Prrc2a	exon	ENSMUSG00000024393	ProperStrand	315	1	-5.5102
chr16	15736748	15736766	protein_coding	Prkdc	intron	ENSMUSG00000022672	NonProperStrand	24	chr9	15119676	15119698	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.3157
chr19	41476253	41476343	SINE	B1_Mur3	Alu	chr19B1_Mur341476243	NonProperStrand	1	chr19	41476594	41476674	SINE	B4A	B4	chr19B4A41476534	ProperStrand	1	1	-inf
chr4	43505723	43505792	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr1	173341933	173341949	protein_coding	Usf1	utr5	ENSMUSG00000026641	NonProperStrand	144	1	-1.6141
chr8	47657095	47657112	protein_coding	Mlf1ip	intron	ENSMUSG00000031629	NonProperStrand	3	chr12	17552948	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	2	-19.3291
chr4	84853676	84853708	protein_coding	Sh3gl2	intron	ENSMUSG00000028488	ProperStrand	12	chr19	8799054	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	2	-14.5040
chr2	70580279	70583620	protein_coding	Tlk1	exon	ENSMUSG00000041997	ProperStrand	18	chr14	76247781	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	7	-19.1710
chr5	121655496	121658573	protein_coding	Rpl6	exon	ENSMUSG00000029614	ProperStrand	332	chr19	8963027	8963170	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	4	-1.6894
chr4	66133911	66133929	LINE	Lx5	L1	chr4Lx566133678	ProperStrand	15	chr11	106362639	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-10.2115
chr15	36535274	36538383	protein_coding	Pabpc1	utr5	ENSMUSG00000022283	ProperStrand	908	chr5	130295433	130295548	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	2	-1.5069
chr8	34777289	34777379	protein_coding	Gsr	intron	ENSMUSG00000031584	ProperStrand	18	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.5840
chr18	44231159	44231179	protein_coding	Spink6	exon	ENSMUSG00000055095	ProperStrand	4	chr7	118219574	118219621	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	4	-inf
chr5	111112317	111112878	protein_coding	Ep400	exon	ENSMUSG00000029505	ProperStrand	176	chr2	180397122	180397146	protein_coding	Dido1	exon	ENSMUSG00000038914	ProperStrand	81	1	-10.5510
chr14	121778302	121778326	protein_coding	Stk24	utr5	ENSMUSG00000063410	ProperStrand	7	chr9	15118323	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-7.7405
chr4	138926841	138926931	protein_coding	C230096C10Rik	exon	ENSMUSG00000078517	ProperStrand	69	chr17	24857732	24857812	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.0662
chr7	129132838	129132857	protein_coding	Gga2	utr3	ENSMUSG00000030872	ProperStrand	65	chr2	26493366	26493499	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-3.5940
chr9	21812704	21812804	protein_coding	Prkcsh	exon	ENSMUSG00000003402	ProperStrand	58	chr2	26448908	26448944	protein_coding	Agpat2	utr3	ENSMUSG00000026922	ProperStrand	18	1	-15.8231
chr4	123170494	123171189	protein_coding	Macf1	exon	ENSMUSG00000028649	ProperStrand	320	chr12	62944922	62944938	protein_coding	Lrfn5	exon	ENSMUSG00000035653	ProperStrand	2	1	-17.5975
chr8	73871575	73871655	protein_coding	Myo9b	exon	ENSMUSG00000004677	ProperStrand	78	chr16	23111446	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-4.4054
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr2	179763658	179763708	protein_coding	Lsm14b	exon	ENSMUSG00000039108	ProperStrand	26	1	-10.5280
chr17	66468411	66468427	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	chr9	15119644	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-1.4424
chr2	90235315	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	116443734	116443750	protein_coding	Best3	intron	ENSMUSG00000020169	NonProperStrand	12	1	-7.6663
chr2	79843543	79843559	protein_coding	Pde1a	intron	ENSMUSG00000059173	NonProperStrand	275	chr4	131865380	131865449	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-1.4124
chr18	73693109	73693188	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr9	120039533	120039683	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	35	-12.8267
chr17	83862854	83872394	protein_coding	Eml4	exon	ENSMUSG00000032624	ProperStrand	50	chr16	23111370	23111450	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.5189
chr16	26504951	26504967	protein_coding	Tmem207	exon	ENSMUSG00000091972	NonProperStrand	34	chr11	106362638	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-8.5432
chr17	17530445	17530495	protein_coding	Riok2	exon	ENSMUSG00000023846	ProperStrand	8	chr1	120580860	120580900	protein_coding	Tfcp2l1	utr3	ENSMUSG00000026380	ProperStrand	158	1	-15.4848
chr7	117189934	117190014	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	chr14	52829480	52829570	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	8	-4.1288
chr17	35189784	35189803	protein_coding	Clic1	exon	ENSMUSG00000007041	ProperStrand	12	chr8	122157077	122157094	protein_coding	Kcng4	exon	ENSMUSG00000045246	ProperStrand	14	1	-inf
chr12	110874223	110874290	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	chr17	35089181	35089224	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-2.4060
chr8	36529522	36529538	protein_coding	Eri1	utr3	ENSMUSG00000031527	NonProperStrand	97	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-6.7847
chr12	106003084	106003125	protein_coding	Clmn	utr3	ENSMUSG00000021097	ProperStrand	50	chr16	23111453	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-2.8538
chr17	47066477	47066533	protein_coding	Ubr2	utr3	ENSMUSG00000023977	ProperStrand	172	chr7	150717298	150717340	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-3.5042
chr8	87620751	87620941	protein_coding	Man2b1	exon	ENSMUSG00000005142	ProperStrand	27	chr19	8799830	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	5	-19.3425
chr1	92689614	92689630	protein_coding	Col6a3	exon	ENSMUSG00000048126	ProperStrand	79	chr9	44938048	44938087	protein_coding	Scn2b	utr3	ENSMUSG00000070304	ProperStrand	2	1	-inf
chr1	72166839	72166855	SINE	B4A	B4	chr1B4A72166632	ProperStrand	19	chr15	80086868	80086911	protein_coding	Atf4	exon	ENSMUSG00000042406	ProperStrand	6	1	-19.5063
chrX	5659506	5659606	protein_coding	AU022751	exon	ENSMUSG00000073294	ProperStrand	5	chr14	33005117	33005190	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-9.0442
chr6	72386299	72386465	protein_coding	Mat2a	exon	ENSMUSG00000053907	ProperStrand	51	chr7	52378397	52378477	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	1	-8.8303
chr5	23825941	23825957	protein_coding	Kcnh2	exon	ENSMUSG00000038319	ProperStrand	242	chr5	108334195	108334242	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-2.2810
chr2	34630239	34630280	protein_coding	Hspa5	exon	ENSMUSG00000026864	ProperStrand	181	chr5	74489578	74489680	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	7	-14.2075
chr2	30888218	30888308	protein_coding	Fnbp1	utr3	ENSMUSG00000075415	ProperStrand	53	chr2	26494720	26494800	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.3318
chr17	56536784	56538834	protein_coding	Kdm4b	exon	ENSMUSG00000024201	ProperStrand	45	chr5	115940316	115940406	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	1	-9.3139
chr5	74489202	74489263	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr10	86155038	86155145	protein_coding	Hsp90b1	exon	ENSMUSG00000020048	ProperStrand	396	1	-2.1536
chr9	118835586	118835605	protein_coding	Ctdspl	utr5	ENSMUSG00000047409	NonProperStrand	9	chr17	24857716	24857777	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-9.7647
chr6	71547382	71549325	protein_coding	Kdm3a	exon	ENSMUSG00000053470	ProperStrand	41	chr4	131908239	131908296	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.0019
chr10	7675761	7675777	protein_coding	Tab2	utr5	ENSMUSG00000015755	ProperStrand	41	chr8	32260335	32260423	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-5.3685
chr10	79322420	79322578	protein_coding	Ptbp1	exon	ENSMUSG00000006498	ProperStrand	129	chr5	111121070	111121150	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-4.9387
chr10	105278600	105278616	protein_coding	Ccdc59	exon	ENSMUSG00000019897	ProperStrand	21	chr7	146090492	146101055	protein_coding	Bnip3	exon	ENSMUSG00000078566	ProperStrand	20	1	-17.4608
chr15	98864998	98867488	protein_coding	Tuba1c	exon	ENSMUSG00000043091	ProperStrand	28	chr16	23110981	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.1386
chr4	122968584	122968676	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	chr14	31827478	31827514	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-0.7923
chr9	99211928	99211945	protein_coding	Esyt3	utr3	ENSMUSG00000037681	ProperStrand	7	chr8	98270036	98270085	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-9.9218
chr6	93127321	93127338	lincRNA	9530026P05Rik	intron	ENSMUSG00000087573	ProperStrand	51	chr4	131908373	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.6592
chr17	71814021	71814053	protein_coding	Smchd1	intron	ENSMUSG00000024054	ProperStrand	79	chr4	131908236	131908297	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	5	-6.4703
chr10	20044985	20045075	protein_coding	Bclaf1	exon	ENSMUSG00000037608	ProperStrand	83	chr7	116664793	116664873	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.0079
chr2	26493392	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr1	63225259	63225280	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	1	-2.0616
chr18	69845431	69845448	protein_coding	Tcf4	utr3	ENSMUSG00000053477	NonProperStrand	19	chr7	116663698	116663758	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-11.2155
chr16	57391628	57391676	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr8	60980859	60980877	protein_coding	Galntl6	intron	ENSMUSG00000061864	ProperStrand	44	1	-10.9307
chr17	65407713	65407793	LINE	L1Md_F3	L1	chr17L1Md_F365407187	NonProperStrand	1	chr2	150068108	150068198	LINE	L1Md_F3	L1	chr2L1Md_F3150067916	NonProperStrand	2	1	-inf
chr1	154942645	154942680	protein_coding	Nmnat2	intron	ENSMUSG00000042751	ProperStrand	39	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.0232
chr2	126472468	126472484	protein_coding	Gabpb1	exon	ENSMUSG00000027361	ProperStrand	54	chr9	64023228	64023282	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	1	-8.6564
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr7	109149271	109149287	protein_coding	Numa1	exon	ENSMUSG00000066306	NonProperStrand	171	1	-7.2801
chr10	79200229	79200319	protein_coding-noncoding	Polrmt	utr3	ENSMUSG00000020329	NonProperStrand	1	chr10	79199947	79200027	protein_coding	Polrmt	intron	ENSMUSG00000020329	NonProperStrand	5	1	-inf
chr2	119624294	119624311	protein_coding	Tyro3	utr5	ENSMUSG00000027298	NonProperStrand	2	chr7	29136525	29136605	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-9.5181
chr3	88877580	88877613	protein_coding	Ash1l	intron	ENSMUSG00000028053	ProperStrand	30	chr13	96102585	96102644	snoRNA	ENSMUSG00000077380_SNORA68	.	ENSMUSG00000077380	ProperStrand	51	1	-15.0548
chr3	96362880	96364593	protein_coding	Txnip	utr3	ENSMUSG00000038393	ProperStrand	172	chr18	35716763	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-1.4634
chr8	87387980	87388008	protein_coding	Farsa	exon	ENSMUSG00000003808	ProperStrand	21	chr2	37502726	37502742	protein_coding	Strbp	utr5	ENSMUSG00000026915	ProperStrand	90	1	-14.6300
chr9	113583569	113587462	protein_coding	Pdcd6ip	exon	ENSMUSG00000032504	ProperStrand	53	chr3	108357268	108357348	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-4.7785
chr1	71672709	71672758	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr18	63908609	63908625	protein_coding	Wdr7	intron	ENSMUSG00000040560	NonProperStrand	180	1	-5.6627
chr19	8992030	8992120	SINE	B1_Mm	Alu	chr19B1_Mm8992055	ProperStrand	1	chr19	8992191	8992281	SINE	PB1D9	Alu	chr19PB1D98992210	ProperStrand	1	1	-inf
chr2	148506126	148506145	LTR	MER67C	ERV1	chr2MER67C148506121	ProperStrand	3	chr5	130300473	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-8.5956
chr16	11144176	11144276	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr18	65740045	65740061	protein_coding	Zfp532	utr5	ENSMUSG00000042439	NonProperStrand	8	1	-14.5883
chr8	109566931	109568373	protein_coding	Vps4a	exon	ENSMUSG00000031913	ProperStrand	10	chr16	23110968	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.7978
chr3	85944570	85944609	snoRNA	ENSMUSG00000064390_Rnu73b	.	ENSMUSG00000064390	ProperStrand	164	chr11	69483136	69483236	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-3.0753
chr3	146348453	146348470	protein_coding	Samd13	utr5	ENSMUSG00000048652	NonProperStrand	2	chr16	23110828	23110902	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-inf
chr9	107965905	107966012	protein_coding	Rnf123	exon	ENSMUSG00000041528	ProperStrand	12	chr15	78504284	78504301	protein_coding	Elfn2	exon	ENSMUSG00000043460	NonProperStrand	20	1	-18.6218
chr7	13614865	13615035	protein_coding	Trim28	exon	ENSMUSG00000005566	ProperStrand	296	chr5	121655021	121655101	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-1.1245
chr1	89105750	89105766	protein_coding	Chrng	exon	ENSMUSG00000026253	NonProperStrand	130	chr17	39985560	39985601	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-4.4346
chr14	120419873	120419889	protein_coding	Oxgr1	utr3	ENSMUSG00000044819	ProperStrand	8	chr14	76247705	76247739	protein_coding	Tpt1	intron	ENSMUSG00000060126	ProperStrand	236	2	-18.7330
chr9	61762241	61762311	protein_coding	Rplp1	utr5	ENSMUSG00000007892	ProperStrand	116	chr3	121981798	121983741	protein_coding	Dnttip2	exon	ENSMUSG00000039756	ProperStrand	4	1	-17.6484
chr18	12298762	12298784	protein_coding	Riok3	intron	ENSMUSG00000024404	ProperStrand	38	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-7.1210
chr11	106016360	106016384	protein_coding	Map3k3	utr3	ENSMUSG00000020700	ProperStrand	36	chr1	181600793	181608178	protein_coding	Sccpdh	exon	ENSMUSG00000038936	ProperStrand	4	3	-21.9295
chr9	56775853	56775870	protein_coding	Snx33	utr5	ENSMUSG00000032733	NonProperStrand	116	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	2	-10.3993
chr16	31790344	31791847	protein_coding	Dlg1	exon	ENSMUSG00000022770	ProperStrand	69	chr9	15119646	15119726	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.3903
chr4	116883486	116883565	snRNA	ENSMUSG00000070237_U5	.	ENSMUSG00000070237	ProperStrand	154	chr4	131866155	131866267	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-3.6390
chr10	110918622	110918722	protein_coding	Nap1l1	intron	ENSMUSG00000058799	ProperStrand	185	chr7	52381972	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-4.5181
chr7	117189863	117189944	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr15	82980193	82980224	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-0.8633
chr17	33914043	33914059	protein_coding	Angptl4	exon	ENSMUSG00000002289	ProperStrand	21	chr16	23110827	23110851	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.5481
chr10	95502286	95502386	protein_coding	Eea1	utr3	ENSMUSG00000036499	ProperStrand	82	chr14	76247810	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-3.5879
chr15	82033624	82033684	protein_coding	Srebf2	exon	ENSMUSG00000022463	ProperStrand	592	chr1	169170383	169170400	protein_coding	Uck2	intron	ENSMUSG00000026558	ProperStrand	45	1	-9.3105
chr10	128071423	128071494	protein_coding	Ikzf4	exon	ENSMUSG00000002578	ProperStrand	2	chr10	110918640	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-10.7503
chr11	116809790	116809809	protein_coding	Mgat5b	intron	ENSMUSG00000043857	NonProperStrand	15	chr16	23111372	23111443	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-9.1065
chr13	101591106	101591145	protein_coding	Slc30a5	exon	ENSMUSG00000021629	ProperStrand	12	chr16	23110830	23110869	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-6.8317
chrX	159218739	159218756	protein_coding	Txlng	utr3	ENSMUSG00000038344	ProperStrand	45	chr4	149019485	149019539	protein_coding	Clstn1	exon	ENSMUSG00000039953	ProperStrand	173	1	-11.7689
chr2	25294472	25294590	protein_coding	Abca2	exon	ENSMUSG00000026944	ProperStrand	57	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-6.6928
chr1	150821205	150821222	LINE	L1_Rod	L1	chr1L1_Rod150821178	NonProperStrand	1	chr10	23505553	23505612	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-inf
chr12	71347267	71347283	protein_coding	Trim9	utr3	ENSMUSG00000021071	NonProperStrand	75	chr1	93263065	93263081	protein_coding	Fam132b	exon	ENSMUSG00000047443	NonProperStrand	98	1	-11.8788
chr9	49312166	49312193	protein_coding	Ncam1	utr3	ENSMUSG00000039542	NonProperStrand	8	chr11	62418038	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-9.6511
chr5	131382512	131382528	protein_coding	Wbscr17	exon	ENSMUSG00000034040	ProperStrand	13	chr14	31827477	31827543	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	2	-15.9526
chrX	39295385	39295403	SINE	B3A	B2	chrXB3A39295338	ProperStrand	1	chr10	77735282	77735382	protein_coding	Agpat3	utr3	ENSMUSG00000001211	NonProperStrand	4	1	-inf
chr3	94976744	94976835	protein_coding	Sema6c	exon	ENSMUSG00000038777	ProperStrand	30	chr9	15130745	15130808	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	1	-10.6120
chr2	181405343	181405359	protein_coding	Sox18	exon	ENSMUSG00000046470	ProperStrand	96	chr14	31827479	31827545	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-6.0162
chr9	40610931	40611092	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr12	60141469	60141509	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	2	-3.6313
chr2	25822437	25822465	protein_coding	Camsap1	exon	ENSMUSG00000026933	ProperStrand	27	chr15	79913288	79913321	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-5.1173
chr11	51415285	51415301	protein_coding	Agxt2l2	intron	ENSMUSG00000020359	ProperStrand	4	chr5	145306942	145307010	protein_coding	Nptx2	exon	ENSMUSG00000059991	ProperStrand	15	1	-21.2797
chr15	82980134	82980224	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr13	49779671	49779751	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-1.3940
chr13	68759738	68764669	protein_coding	Adcy2	exon	ENSMUSG00000021536	ProperStrand	237	chr18	75161533	75161598	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-4.5198
chrX	35804939	35805002	protein_coding	Lamp2	intron	ENSMUSG00000016534	ProperStrand	19	chr15	98350223	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-7.0352
chr5	75473198	75473215	protein_coding	Gsx2	utr3	ENSMUSG00000035946	ProperStrand	307	chr6	71832638	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-2.5705
chr11	68067261	68067277	protein_coding	Ntn1	intron	ENSMUSG00000020902	NonProperStrand	194	chr14	52829494	52829570	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-5.8787
chr4	129497822	129516223	protein_coding	Ptp4a2	utr5	ENSMUSG00000028788	ProperStrand	27	chr1	10141947	10143475	protein_coding	Arfgef1	exon	ENSMUSG00000067851	NonProperStrand	27	1	-16.5433
chr5	121814613	121814703	protein_coding	Gm15800	exon	ENSMUSG00000042744	ProperStrand	47	chr4	131908266	131908346	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.7849
chr9	67805361	67805428	protein_coding	Vps13c	exon	ENSMUSG00000035284	ProperStrand	69	chr19	8798746	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-4.5327
chr11	109226481	109226497	protein_coding	Gna13	intron	ENSMUSG00000020611	ProperStrand	23	chr11	62416602	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-7.0660
chr8	74906578	74906594	protein_coding	Eps15l1	exon	ENSMUSG00000006276	NonProperStrand	42	chr16	23110911	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-4.9539
chr1	89673714	89673765	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	chr10	30530998	30531020	tRNA	tRNA81-GluCTC	.	730546	ProperStrand	154	1	-1.6748
chr10	5634068	5634084	protein_coding	Esr1	exon	ENSMUSG00000019768	NonProperStrand	24	chr16	23110828	23110860	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.3518
chr19	6368374	6371279	protein_coding	Sf1	exon	ENSMUSG00000024949	ProperStrand	251	chr8	13876154	13876226	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-4.3541
chr3	89560591	89560641	protein_coding	Chrnb2	utr3	ENSMUSG00000027950	ProperStrand	8	chr6	85164290	85164306	protein_coding	Sfxn5	utr3	ENSMUSG00000033720	ProperStrand	26	1	-18.7770
chr2	119599548	119599586	protein_coding	Rpap1	exon	ENSMUSG00000034032	ProperStrand	96	chr12	106269445	106269511	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-3.2690
chr16	96349066	96349253	protein_coding	Hmgn1	utr5	ENSMUSG00000040681	ProperStrand	38	chr16	23110968	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.5894
chr1	168506206	168506296	LTR	IAPEY3-int	ERVK	chr1IAPEY3-int168505947	NonProperStrand	1	chr1	168506709	168506799	LTR	IAPEY3-int	ERVK	chr1IAPEY3-int168506653	NonProperStrand	1	1	-inf
chr2	25563070	25563086	antisense	A230005M16Rik	.	ENSMUSG00000087612	ProperStrand	103	chr7	118219595	118219620	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-3.1708
chr14	33153227	33153832	protein_coding	Ogdhl	exon	ENSMUSG00000021913	ProperStrand	182	chr7	52382753	52382809	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-4.5878
chr6	115757996	115758097	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr15	79908930	79909020	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	25	-inf
chr8	72613823	72613839	protein_coding	Hapln4	utr3	ENSMUSG00000007594	NonProperStrand	85	chr2	125566096	125566196	protein_coding	Secisbp2l	exon	ENSMUSG00000035093	ProperStrand	26	1	-14.3017
chr15	83143909	83143959	protein_coding	Arfgap3	exon	ENSMUSG00000054277	ProperStrand	6	chr8	73419712	73419729	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-17.9496
chr2	76690968	76691221	protein_coding	Ttn	exon	ENSMUSG00000051747	NonProperStrand	27	chrX	34622960	34623036	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-4.6723
chr7	37526966	37526982	protein_coding	Tshz3	intron	ENSMUSG00000021217	ProperStrand	16	chr5	74489605	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	2	-10.3724
chr2	181544994	181545012	protein_coding	Myt1	exon	ENSMUSG00000010505	ProperStrand	14	chr9	15119287	15119396	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	7	-inf
chr11	29274019	29274109	protein_coding	Ccdc88a	utr5	ENSMUSG00000032740	ProperStrand	12	chr5	130300462	130300542	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-5.5517
chr12	114089767	114089783	protein_coding	Gpr132	utr3	ENSMUSG00000021298	ProperStrand	7	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-11.3913
chr12	99497602	99497618	protein_coding	Galc	utr5	ENSMUSG00000021003	NonProperStrand	65	chr1	89681329	89681396	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-5.2849
chr16	5073164	5073438	protein_coding	Ubn1	exon	ENSMUSG00000039473	ProperStrand	35	chr7	116663672	116663752	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.4745
chr2	90235291	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	30957234	30957287	protein_coding	Aplp2	utr3	ENSMUSG00000031996	ProperStrand	172	2	-4.4611
chr13	49788445	49788488	protein_coding	Iars	exon	ENSMUSG00000037851	ProperStrand	95	chr4	131865856	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-2.1655
chr12	71146391	71146407	protein_coding	Nin	exon	ENSMUSG00000021068	ProperStrand	95	chr11	106362674	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-6.4929
chr4	9595983	9596044	protein_coding	Asph	exon	ENSMUSG00000028207	ProperStrand	14	chr11	98623093	98623110	protein_coding	Thra	exon	ENSMUSG00000058756	ProperStrand	63	1	-16.2166
chr19	9040168	9040212	protein_coding	Tut1	exon	ENSMUSG00000071645	ProperStrand	12	chr18	63109676	63109692	protein_coding	Apcdd1	exon	ENSMUSG00000071847	NonProperStrand	254	1	-13.7033
chr10	79325564	79325761	protein_coding	Ptbp1	exon	ENSMUSG00000006498	ProperStrand	129	chr11	118121297	118121313	protein_coding	Usp36	utr3	ENSMUSG00000033909	NonProperStrand	6	1	-16.4904
chr2	162862445	162866374	protein_coding	Ift52	exon	ENSMUSG00000017858	ProperStrand	10	chr13	51858634	51858676	protein_coding	Sema4d	utr5	ENSMUSG00000021451	ProperStrand	42	1	-17.6420
chr15	79558293	79558309	protein_coding	Sun2	exon	ENSMUSG00000042524	ProperStrand	13	chr4	98403571	98403662	protein_coding	L1td1	exon	ENSMUSG00000087166	ProperStrand	43	1	-17.1926
chr1	162967507	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	chr7	134671419	134671519	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	8	-3.6310
chr9	108001165	108001182	protein_coding	Bsn	utr3	ENSMUSG00000032589	NonProperStrand	20	chr11	117222599	117222671	protein_coding	Sept9	utr3	ENSMUSG00000059248	ProperStrand	60	1	-15.5451
chr6	125079986	125080007	protein_coding	Chd4	exon	ENSMUSG00000063870	ProperStrand	303	chr2	26493366	26493498	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-1.0906
chrX	71589885	71589908	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr2	76398741	76398758	protein_coding	Osbpl6	intron	ENSMUSG00000042359	ProperStrand	19	1	-12.4815
chr1	98922586	98922605	pseudogene	Gm6430	.	ENSMUSG00000044757	ProperStrand	1	chr5	130300450	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-inf
chr2	156350958	156350975	protein_coding	Epb4.1l1	utr5	ENSMUSG00000027624	ProperStrand	27	chr2	158182192	158182245	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-6.5761
chr8	107694672	107694717	protein_coding	Cbfb	utr5	ENSMUSG00000031885	ProperStrand	21	chr11	69481372	69481424	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.1963
chr19	3496597	3496649	protein_coding	Ppp6r3	exon	ENSMUSG00000024908	ProperStrand	63	chr7	116663715	116663752	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.4284
chr1	155109755	155179292	protein_coding	Lamc1	exon	ENSMUSG00000026478	ProperStrand	239	chr5	121655128	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-1.4173
chr9	120866698	120866749	protein_coding	Ctnnb1	exon	ENSMUSG00000006932	ProperStrand	214	chr7	63404136	63404159	protein_coding	Herc2	exon	ENSMUSG00000030451	ProperStrand	66	2	-16.6233
chr6	47731663	47731708	misc_RNA	Y_RNA	.	ENSMUSG00000064945	ProperStrand	93	chr14	28284936	28284957	protein_coding	D14Abb1e	exon	ENSMUSG00000040651	ProperStrand	49	1	-12.8415
chr6	69657216	69657233	LTR	IAPEz-int	ERVK	chr6IAPEz-int69657165	NonProperStrand	42	chr10	23505179	23505236	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.7547
chr7	4748484	4748532	SINE	B1_Mur2	Alu	chr7B1_Mur24748431	NonProperStrand	1	chr9	20591746	20591978	protein_coding	Col5a3	exon	ENSMUSG00000004098	ProperStrand	47	1	-inf
chr13	23855559	23855646	protein_coding	Hist1h1a	utr5	ENSMUSG00000049539	ProperStrand	34	chr9	15119720	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.6547
chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	chr11	77995189	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	5	-1.6068
chr13	76193665	76193681	protein_coding	Gpr150	exon	ENSMUSG00000045509	NonProperStrand	63	chr7	148634701	148634775	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-3.8945
chr9	21199833	21199888	protein_coding	Ilf3	exon	ENSMUSG00000032178	ProperStrand	164	chr18	82662186	82662202	protein_coding	Mbp	intron	ENSMUSG00000041607	NonProperStrand	185	1	-9.0393
chr4	122972902	122972953	protein_coding	Pabpc4	intron	ENSMUSG00000011257	ProperStrand	85	chr11	6428089	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	5	-11.8661
chr7	54110907	54110977	protein_coding	Ldha	utr3	ENSMUSG00000063229	ProperStrand	280	chr1	162965558	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-0.8736
chr6	55067824	55067841	protein_coding	Crhr2	utr5	ENSMUSG00000003476	NonProperStrand	12	chr5	123905290	123905330	protein_coding	Mlxip	utr3	ENSMUSG00000038342	ProperStrand	21	1	-18.6634
chr1	89607615	89607657	protein_coding	Inpp5d	intron	ENSMUSG00000026288	ProperStrand	75	chr7	114353465	114353487	protein_coding	Rbmxl2	exon	ENSMUSG00000073894	ProperStrand	23	1	-14.8024
chr18	90266148	90266228	LINE	Lx2	L1	chr18Lx290266047	NonProperStrand	1	chr5	55806035	55806125	LINE	Lx7	L1	chr5Lx755806059	ProperStrand	1	1	-inf
chr10	92773877	92773893	Simple_repeat	(CCCG)n	Simple_repeat	chr10(CCCG)n92773837	NonProperStrand	2	chr11	72886876	72886897	protein_coding	1200014J11Rik	exon	ENSMUSG00000020783	ProperStrand	11	1	-21.3789
chr9	69264848	69264920	protein_coding	Narg2	exon	ENSMUSG00000032235	ProperStrand	4	chr11	51551280	51551335	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	1	-13.3683
chr9	78023161	78023194	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr16	38158157	38158226	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	1	-1.6625
chr7	17018353	17018369	protein_coding	Zc3h4	exon	ENSMUSG00000059273	ProperStrand	95	chr16	23110526	23110557	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.7158
chr14	22445455	22445497	protein_coding	Myst4	intron	ENSMUSG00000021767	ProperStrand	151	chr1	162967152	162967178	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	1	-6.8423
mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr5	121655015	121655153	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	20	-6.7650
chr7	136800631	136800649	SINE	RSINE1	B4	chr7RSINE1136800606	ProperStrand	216	chr3	104602388	104602409	protein_coding	Mov10	exon	ENSMUSG00000002227	ProperStrand	96	1	-9.8007
chr2	147009105	147009122	protein_coding	Nkx2-2	utr3	ENSMUSG00000027434	NonProperStrand	84	chr1	33828651	33828669	protein_coding	Zfp451	intron	ENSMUSG00000042197	NonProperStrand	393	1	-8.8743
chr11	50230494	50230557	protein_coding	Rufy1	intron	ENSMUSG00000020375	ProperStrand	3	chr19	8800377	8800467	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-9.7434
chr8	86462872	86462956	protein_coding	Lphn1	exon	ENSMUSG00000013033	ProperStrand	221	chr16	87425939	87425957	protein_coding	Ltn1	exon	ENSMUSG00000052299	ProperStrand	49	1	-11.1071
chr2	144087331	144087431	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	chr1	162967734	162967805	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	1	-3.6039
chr7	119934425	119934472	protein_coding	Tead1	intron	ENSMUSG00000055320	ProperStrand	217	chr12	60141466	60141505	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-4.3283
chr1	74787365	74787734	protein_coding	Prkag3	exon	ENSMUSG00000006542	ProperStrand	3	chr16	23111452	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-12.1275
chr1	71695835	71697136	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr11	58889820	58889836	protein_coding	Obscn	exon	ENSMUSG00000061462	ProperStrand	81	1	-7.2352
chr2	31640343	31640443	protein_coding	Abl1	intron	ENSMUSG00000026842	ProperStrand	131	chr1	162965553	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.9369
chr7	31083927	31084007	protein_coding	Clip3	exon	ENSMUSG00000013921	ProperStrand	5	chr11	6428034	6428085	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-8.1751
chr16	38055811	38055891	LINE	L1MEc	L1	chr16L1MEc38055691	NonProperStrand	1	chr6	132131932	132132022	LTR	ORR1B1-int	MaLR	chr6ORR1B1-int132131625	NonProperStrand	1	1	-inf
chr14	19102826	19102916	protein_coding	Rpl15	exon	ENSMUSG00000012405	ProperStrand	145	chr2	160582368	160582618	protein_coding	Plcg1	exon	ENSMUSG00000016933	ProperStrand	65	2	-17.7094
chr12	112041362	112041422	protein_coding	Wdr20a	intron	ENSMUSG00000037957	NonProperStrand	4	chr1	155287328	155287354	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	3	-19.3627
chr8	69904122	69904138	LTR	RMER13B	ERVK	chr8RMER13B69903872	ProperStrand	9	chr11	120646482	120646526	protein_coding	Gps1	exon	ENSMUSG00000025156	ProperStrand	22	1	-19.2845
chr4	129286522	129286540	protein_coding	Dcdc2b	intron	ENSMUSG00000078552	ProperStrand	1	chr9	120037995	120038056	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-inf
chr15	4105015	4105115	protein_coding	Oxct1	utr3	ENSMUSG00000022186	ProperStrand	48	chr5	130300421	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	7	-19.2795
chr9	69972993	69973998	protein_coding	Fam81a	exon	ENSMUSG00000032224	ProperStrand	59	chr17	39985194	39985244	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-5.9652
chr2	90235304	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	130104012	130104634	protein_coding	Nop56	exon	ENSMUSG00000027405	ProperStrand	125	1	-3.1001
chr10	23291949	23291968	LTR	RMER20A	ERVK	chr10RMER20A23291526	ProperStrand	1	chr15	77746095	77746111	protein_coding	Txn2	utr3	ENSMUSG00000005354	ProperStrand	82	1	-inf
chr4	147844790	147844809	protein_coding	Mtor	exon	ENSMUSG00000028991	ProperStrand	65	chr3	19528533	19528550	protein_coding	1700064H15Rik	exon	ENSMUSG00000082766	NonProperStrand	78	1	-12.6260
chr6	142439080	142439096	protein_coding	Ldhb	exon	ENSMUSG00000030246	NonProperStrand	63	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-5.7719
chr11	60370927	60370943	protein_coding	Alkbh5	utr3	ENSMUSG00000042650	ProperStrand	203	chr7	134671387	134671519	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-5.4666
chr10	20799308	20799398	protein_coding	Ahi1	utr3	ENSMUSG00000019986	ProperStrand	10	chrX	34622905	34622986	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	5	-19.8275
chr5	100855902	100855943	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr1	91040655	91040698	protein_coding	Sh3bp4	exon	ENSMUSG00000036206	ProperStrand	20	1	-8.8463
chr10	6584402	6584421	protein_coding	Plekhg1	intron	ENSMUSG00000040624	ProperStrand	9	chr11	106362640	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	2	-17.7232
chr2	76690968	76691221	protein_coding	Ttn	exon	ENSMUSG00000051747	NonProperStrand	27	chr3	123210854	123210982	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	4	-11.7814
chr8	109177536	109177750	protein_coding	Cdh1	exon	ENSMUSG00000000303	ProperStrand	283	chr7	116664819	116664868	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	19	-inf
chr5	34993104	34993194	protein_coding	Nop14	exon	ENSMUSG00000036693	ProperStrand	35	chr18	35716754	35716834	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.1046
chr13	9833551	9833660	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr4	130305549	130305622	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	2	-3.4497
chr3	19528533	19528550	protein_coding	1700064H15Rik	exon	ENSMUSG00000082766	NonProperStrand	78	chr4	131908811	131908871	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.8889
chr2	90235315	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	152806422	152806438	protein_coding	Ajap1	exon	ENSMUSG00000039546	ProperStrand	51	1	-4.7748
chr14	19102912	19102933	protein_coding	Rpl15	exon	ENSMUSG00000012405	ProperStrand	145	chr5	130295435	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-3.5733
chr9	20604728	20605515	protein_coding	Col5a3	exon	ENSMUSG00000004098	ProperStrand	47	chr8	13416897	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-6.9390
chr1	72583809	72583889	Low_complexity	GA-rich	Low_complexity	chr1GA-rich72583793	NonProperStrand	1	chr1	72583389	72583479	protein_coding	March4	utr5	ENSMUSG00000039372	ProperStrand	3	1	-inf
chr6	91437817	91437932	protein_coding	Tmem43	utr3	ENSMUSG00000030095	ProperStrand	14	chr18	35714252	35714291	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-6.2700
mmu-miR-1949	7	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr2	165942392	165942452	protein_coding	Sulf2	exon	ENSMUSG00000006800	ProperStrand	171	1	-6.0734
chr17	36124442	36124532	protein_coding	Gnl1	exon	ENSMUSG00000024429	ProperStrand	70	chr2	113997326	113997407	protein_coding	Aqr	intron	ENSMUSG00000040383	ProperStrand	70	1	-12.6953
chr9	105660681	105662384	protein_coding	Col6a6	utr3	ENSMUSG00000043719	ProperStrand	8	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-15.8164
chr11	69419233	69419290	protein_coding	Atp1b2	utr5	ENSMUSG00000041329	ProperStrand	28	chr1	88252837	88252887	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	4	-20.9914
chr10	127995142	127995173	protein_coding	Pa2g4	utr3	ENSMUSG00000025364	ProperStrand	72	chr2	35584291	35584309	protein_coding	Dab2ip	utr3	ENSMUSG00000026883	NonProperStrand	58	1	-13.0175
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr3	152450610	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	1	-4.4773
chr4	43505656	43505906	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr14	64081493	64081512	protein_coding	Fam167a	utr3	ENSMUSG00000035095	ProperStrand	80	21	-21.6320
chr15	83794814	83794830	protein_coding	Efcab6	intron	ENSMUSG00000022441	ProperStrand	60	chr2	125565220	125565249	protein_coding	Secisbp2l	utr3	ENSMUSG00000035093	ProperStrand	26	1	-14.9956
chr9	24549614	24549633	protein_coding	Tbx20	intron	ENSMUSG00000031965	NonProperStrand	110	chr11	116533828	116533890	snoRNA	ENSMUSG00000065640_Snord1c	.	ENSMUSG00000065640	ProperStrand	373	1	-8.4394
chr8	4132147	4132237	LINE	Lx7	L1	chr8Lx74132057	NonProperStrand	1	chr19	8781773	8781853	protein_coding	Slc3a2	utr3	ENSMUSG00000010095	ProperStrand	63	1	-inf
chr4	131865855	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr4	41150096	41150159	snoRNA	ENSMUSG00000089265_SNORD121A	.	ENSMUSG00000089265	ProperStrand	370	6	-1.7189
chr18	65806524	65806614	protein_coding	Zfp532	intron	ENSMUSG00000042439	ProperStrand	24	chr2	158185576	158185652	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-8.3217
chr3	153991597	153991614	protein_coding	Lhx8	utr5	ENSMUSG00000093486	NonProperStrand	47	chr4	131865855	131865873	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.1591
chr1	60545638	60545654	protein_coding	Raph1	intron	ENSMUSG00000026014	NonProperStrand	15	chr7	52484154	52486709	protein_coding	Tead2	exon	ENSMUSG00000030796	ProperStrand	39	1	-16.9311
chr8	114437578	114437605	protein_coding	Tmem231	utr3	ENSMUSG00000031951	ProperStrand	17	chr19	8963086	8963183	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.5881
chr11	35283808	35283829	protein_coding	Slit3	intron	ENSMUSG00000056427	ProperStrand	61	chr8	32260360	32260424	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-4.5982
chr2	90235315	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	113362431	113362470	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	1	-1.0675
chr14	41734209	41734233	protein_coding	Tspan14	intron	ENSMUSG00000037824	ProperStrand	31	chr9	120039533	120039661	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-4.5608
chr5	87354839	87354855	protein_coding	Ugt2b1	exon	ENSMUSG00000035836	ProperStrand	26	chr11	68887007	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-5.7674
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr16	26504951	26504967	protein_coding	Tmem207	exon	ENSMUSG00000091972	NonProperStrand	34	1	-7.0306
chr4	55431651	55431668	lincRNA	Gm12505	exon	ENSMUSG00000087070	ProperStrand	447	chr2	93633270	93633286	protein_coding	Ext2	intron	ENSMUSG00000027198	ProperStrand	49	1	-9.6993
chr14	51463983	51463999	protein_coding	Tep1	exon	ENSMUSG00000006281	NonProperStrand	73	chr17	35293344	35293405	protein_coding	Prrc2a	exon	ENSMUSG00000024393	ProperStrand	315	1	-9.5965
chr5	31191720	31191737	protein_coding	Agbl5	utr5	ENSMUSG00000029165	ProperStrand	12	chr4	56910549	56910618	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-9.3593
chr19	21910011	21910060	protein_coding	Tmem2	exon	ENSMUSG00000024754	ProperStrand	133	chr11	77996560	77996615	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	3	-10.8350
chr10	90582948	90583038	protein_coding-noncoding	Slc25a3	utr3	ENSMUSG00000061904	ProperStrand	13	chr4	131865865	131865945	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.5141
chr16	16323855	16324068	protein_coding	Dnm1l	exon	ENSMUSG00000022789	NonProperStrand	38	chrX	97862608	97862698	protein_coding	Kif4	intron	ENSMUSG00000034311	ProperStrand	24	3	-20.9546
chr14	104886006	104886025	protein_coding	Rnf219	intron	ENSMUSG00000022120	ProperStrand	7	chrX	34623005	34623025	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-7.4170
chr10	82554816	82554843	protein_coding	Chst11	exon	ENSMUSG00000034612	ProperStrand	170	chr7	51505835	51505910	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	1	-6.5448
chr12	33524067	33524147	protein_coding	Nampt	exon	ENSMUSG00000020572	NonProperStrand	2	chr16	23111386	23111476	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	NonProperStrand	38	1	-inf
chr18	32393301	32393318	protein_coding	Map3k2	utr3	ENSMUSG00000024383	NonProperStrand	3	chr3	133141849	133141894	protein_coding	Tet2	intron	ENSMUSG00000040943	ProperStrand	192	2	-inf
chrX	71589885	71589907	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr1	162965532	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	4	-4.0494
chr14	56159295	56159311	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-2.5324
chr2	21750320	21750336	protein_coding	Gpr158	utr3	ENSMUSG00000045967	ProperStrand	11	chr2	32818918	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-8.8904
chr5	74489202	74489270	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr9	72569741	72569759	protein_coding	Nedd4	intron	ENSMUSG00000032216	ProperStrand	308	1	-2.5744
chr6	74401790	74401817	snRNA	ENSMUSG00000064408_U6	.	ENSMUSG00000064408	ProperStrand	1	chr11	98878370	98878455	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-inf
chr2	156376938	156377038	protein_coding	0610011L14Rik	exon	ENSMUSG00000027628	ProperStrand	9	chr19	8963027	8963080	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.8692
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr8	26162839	26167790	protein_coding	Plekha2	exon	ENSMUSG00000031557	ProperStrand	12	1	-11.5932
chr5	147857744	147857763	protein_coding	Lnx2	intron	ENSMUSG00000016520	NonProperStrand	2	chr10	116652670	116652733	protein_coding	Yeats4	utr3	ENSMUSG00000020171	ProperStrand	10	1	-inf
chr11	55309693	55311188	protein_coding	G3bp1	exon	ENSMUSG00000018583	ProperStrand	106	chr18	35714145	35714225	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-2.4354
chr13	8766511	8766601	protein_coding	Adarb2	utr3	ENSMUSG00000052551	NonProperStrand	61	chr7	117189944	117190024	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.3022
chr12	44844109	44844153	snoRNA	ENSMUSG00000065004_SNORA33	.	ENSMUSG00000065004	NonProperStrand	1	chr10	23505200	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	NonProperStrand	45	1	-inf
chr1	133827671	133827725	protein_coding	Nucks1	exon	ENSMUSG00000026434	ProperStrand	59	chr10	85355570	85355588	protein_coding	Prdm4	utr3	ENSMUSG00000035529	ProperStrand	11	1	-16.7218
chr14	31828788	31828839	protein_coding	Gnl3	intron	ENSMUSG00000042354	ProperStrand	53	chr16	23109055	23109090	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-7.5292
chr3	100845107	100845187	protein_coding	Ptgfrn	utr3	ENSMUSG00000027864	ProperStrand	67	chr4	131908236	131908276	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-5.5024
chr4	131908359	131908459	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr2	174254693	174259003	protein_coding	Ctsz	exon	ENSMUSG00000016256	ProperStrand	13	1	-10.3613
chr19	6261807	6261824	protein_coding	Atg2a	exon	ENSMUSG00000024773	ProperStrand	97	chr7	52382237	52382313	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-7.3257
chr4	131865855	131865934	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr1	87983948	87983997	snoRNA	ENSMUSG00000077274_SNORA26	.	ENSMUSG00000077274	ProperStrand	361	5	-1.2291
chr14	73981664	73981754	protein_coding	Sucla2	intron	ENSMUSG00000022110	ProperStrand	20	chr2	26493368	26493448	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-5.8702
chr3	159502831	159502850	protein_coding	Wls	utr5	ENSMUSG00000028173	NonProperStrand	35	chr19	59534008	59534026	protein_coding	Emx2	exon	ENSMUSG00000043969	NonProperStrand	87	1	-13.6561
chr1	135147552	135147568	protein_coding	Plekha6	intron	ENSMUSG00000041757	NonProperStrand	40	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.4299
chr15	99055310	99055329	protein_coding	Kcnh3	utr5	ENSMUSG00000037579	ProperStrand	24	chr17	25996060	25996076	protein_coding	Wdr90	exon	ENSMUSG00000073434	ProperStrand	91	1	-14.3338
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	64024951	64024998	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	3	-3.1603
chr14	61648824	61648841	protein_coding	Tnfrsf19	intron	ENSMUSG00000060548	ProperStrand	34	chr11	55296277	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-7.3099
chr9	40612722	40613024	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr7	118219574	118219634	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	3	-1.4144
chr1	166181268	166181360	protein_coding	Slc19a2	intron	ENSMUSG00000040918	ProperStrand	22	chr1	24621428	24621462	protein_coding	Gm10925	intron	ENSMUSG00000090378	ProperStrand	320	2	-18.6691
chr1	58471535	58471584	protein_coding	Clk1	utr5	ENSMUSG00000026034	ProperStrand	5	chr1	145626154	145626198	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-13.9921
chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	chr11	106362566	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	2	-4.3501
chr5	66651465	66651481	protein_coding	Nsun7	utr5	ENSMUSG00000029206	NonProperStrand	73	chr7	29136523	29136583	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.0406
chr13	98256653	98256752	lincRNA	Gm11019	intron	ENSMUSG00000078952	ProperStrand	113	chr7	67123696	67123753	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	1	-8.2719
chr7	52481032	52481122	protein_coding	Tead2	exon	ENSMUSG00000030796	ProperStrand	39	chr2	103880825	103880905	snoRNA	ENSMUSG00000087739_SCARNA21	.	ENSMUSG00000087739	ProperStrand	50	1	-14.5393
chr1	127303944	127305119	protein_coding	Actr3	exon	ENSMUSG00000026341	ProperStrand	45	chr18	35714145	35714235	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	3	-9.7283
chr2	71299126	71299144	protein_coding	Metap1d	intron	ENSMUSG00000041921	ProperStrand	21	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.5891
chr5	74489203	74489304	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr5	115939520	115939612	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	2	-1.8720
chr12	13170525	13170546	snoRNA	ENSMUSG00000064717_U8	.	ENSMUSG00000064717	ProperStrand	2	chr8	73419657	73419729	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-10.3981
chr11	78150285	78150301	protein_coding	Pigs	exon	ENSMUSG00000041958	NonProperStrand	138	chr11	6428089	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.7824
chr11	55314169	55314193	protein_coding	G3bp1	utr3	ENSMUSG00000018583	ProperStrand	106	chr16	23111694	23111784	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.0793
chr10	82912231	82912321	LTR	IAP-d-int	ERVK	chr10IAP-d-int82912088	NonProperStrand	1	chr3	123210857	123210937	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-inf
chr9	95379702	95379727	protein_coding	2610101N10Rik	exon	ENSMUSG00000032407	ProperStrand	56	chr13	55696162	55696889	protein_coding	Tmed9	exon	ENSMUSG00000058569	ProperStrand	35	5	-21.2105
chr2	9985901	9985917	protein_coding	Atp5c1	exon	ENSMUSG00000025781	ProperStrand	138	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-6.9345
chr4	104704157	104704225	protein_coding	Prkaa2	utr3	ENSMUSG00000028518	ProperStrand	12	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-14.0514
chr7	117166755	117166859	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	chr2	32818841	32818941	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	9	-1.8266
chr1	172611387	172611404	protein_coding	Olfml2b	intron	ENSMUSG00000038463	ProperStrand	57	chr19	8963027	8963123	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.3610
chr6	127912190	127912247	protein_coding	Tspan9	utr3	ENSMUSG00000030352	ProperStrand	67	chr11	97642950	97642980	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-6.1431
chr9	114618300	114618390	protein_coding	Dync1li1	exon	ENSMUSG00000032435	ProperStrand	33	chr12	55797783	55797863	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	1	-8.8978
chr11	117675060	117675124	protein_coding	Syngr2	utr3	ENSMUSG00000048277	ProperStrand	15	chr17	33961257	33961434	protein_coding	Rps28	utr5	ENSMUSG00000067288	NonProperStrand	4	1	-26.3461
chr5	75438992	75439082	protein_coding	Chic2	intron	ENSMUSG00000029229	ProperStrand	5	chr4	131865873	131865953	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-6.5022
chrX	166428589	166428663	protein_coding	Mid1	utr3	ENSMUSG00000035299	ProperStrand	209	chr2	26494717	26494807	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.1196
chr6	100042049	100042139	LTR	LTR33A_	ERVL	chr6LTR33A_100041985	NonProperStrand	1	chr6	100041812	100041902	LTR	MLT1K	MaLR	chr6MLT1K100041782	NonProperStrand	1	1	-inf
chr9	78550959	78550976	protein_coding	Cd109	exon	ENSMUSG00000046186	NonProperStrand	36	chr7	52382753	52382832	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	2	-12.4450
chr10	13030209	13030228	protein_coding	Phactr2	intron	ENSMUSG00000062866	NonProperStrand	7	chr2	26494759	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-12.0192
chr4	151513277	151513293	protein_coding	Espn	exon	ENSMUSG00000028943	ProperStrand	18	chr4	116828392	116828453	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-10.8204
chr5	124909870	124909970	protein_coding	Setd8	exon	ENSMUSG00000049327	ProperStrand	71	chr15	34370545	34370575	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-3.2413
chrX	71201953	71202002	protein_coding	Hcfc1	exon	ENSMUSG00000031386	ProperStrand	424	chr5	108336363	108336408	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-1.4563
chr9	78327750	78328436	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr17	35087893	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	3	-0.7066
chr9	118809445	118809461	protein_coding	Itga9	utr3	ENSMUSG00000039115	ProperStrand	27	chr19	8798484	8798501	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-6.7897
chr3	157729963	157729979	protein_coding	Lrrc40	utr3	ENSMUSG00000063052	ProperStrand	147	chr5	121655016	121655105	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	3	-5.8552
chr2	26195167	26195206	protein_coding	Gpsm1	exon	ENSMUSG00000026930	ProperStrand	93	chr2	145076802	145209255	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-6.8519
chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	chr7	117189863	117189922	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-1.2391
chr5	136707644	136707661	protein_coding	Sh2b2	exon	ENSMUSG00000005057	NonProperStrand	101	chr6	25638699	25638715	protein_coding	Gpr37	exon	ENSMUSG00000039904	ProperStrand	49	1	-12.6768
chr2	90235298	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	3333272	3333289	protein_coding	Cacng7	intron	ENSMUSG00000069806	ProperStrand	29	1	-5.8800
chr2	22444695	22444730	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	chr19	8799388	8799433	snoRNA	ENSMUSG00000065280_SNORD28	.	ENSMUSG00000065280	ProperStrand	269	2	-7.9722
chr13	53073980	53073997	protein_coding	Nfil3	intron	ENSMUSG00000056749	NonProperStrand	66	chr2	26768050	26768093	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	1	-8.2029
chr11	20142169	20142229	protein_coding	Cep68	utr5	ENSMUSG00000044066	ProperStrand	15	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-10.9717
chr8	98269985	98270082	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	chr9	40612117	40612138	snoRNA	ENSMUSG00000075924_Snord14d	.	ENSMUSG00000075924	ProperStrand	131	1	-4.0423
chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	chr2	118435655	118435700	protein_coding	Bub1b	exon	ENSMUSG00000040084	ProperStrand	45	1	-8.7562
chr14	56159295	56159313	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	chr11	97642952	97643090	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	4	-3.8195
chr8	67881439	67881456	LTR	MTEa-int	MaLR	chr8MTEa-int67880462	ProperStrand	39	chr11	78214290	78214307	antisense	Gm11194	.	ENSMUSG00000085747	ProperStrand	35	1	-15.2589
chr2	146125210	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	chr7	116663714	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-0.8563
chr10	122381255	122381271	protein_coding	Ppm1h	utr3	ENSMUSG00000034613	NonProperStrand	21	chr7	116663711	116663761	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.4437
chr11	21040584	21040600	protein_coding	Peli1	exon	ENSMUSG00000020134	ProperStrand	69	chr11	77796427	77796465	protein_coding	Phf12	utr5	ENSMUSG00000037791	ProperStrand	21	1	-15.1495
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr1	102076756	102076790	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	1	-5.0202
chr2	168010190	168010280	protein_coding	Adnp	exon	ENSMUSG00000051149	ProperStrand	48	chr7	29136564	29136644	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	16	-19.2625
chr12	17552945	17553087	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr19	8963022	8963187	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	62	-12.1156
chr11	60974818	60974880	protein_coding	Usp22	exon	ENSMUSG00000042506	ProperStrand	75	chr12	88912986	88913005	protein_coding	Gm2022	intron	ENSMUSG00000071217	NonProperStrand	57	1	-12.9689
chr19	8963027	8963183	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	chr8	113362429	113362490	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	5	-1.4705
chr4	43505756	43505846	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr10	79202048	79202086	protein_coding	Polrmt	exon	ENSMUSG00000020329	ProperStrand	11	1	-6.3578
chr12	55797800	55797890	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	chr10	23506277	23506348	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-1.7617
chr19	8799830	8799882	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	chr12	92811906	92811996	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	1	-0.9490
chr11	88006828	88006891	protein_coding	Cuedc1	utr3	ENSMUSG00000018378	ProperStrand	7	chr1	162965569	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-7.5326
chr4	43505767	43505847	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr5	33714497	33714587	protein_coding	Maea	intron	ENSMUSG00000079562	ProperStrand	32	1	-4.2379
chr2	129998668	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr1	72429943	72429966	protein_coding	Xrcc5	exon	ENSMUSG00000026187	ProperStrand	12	1	-11.3854
chr19	3884543	3884570	protein_coding	Chka	exon	ENSMUSG00000024843	ProperStrand	17	chr3	89750435	89750451	protein_coding	Atp8b2	exon	ENSMUSG00000060671	ProperStrand	140	1	-14.1693
chr11	78150285	78150301	protein_coding	Pigs	exon	ENSMUSG00000041958	NonProperStrand	138	chr11	106362303	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-4.2346
chr11	62416573	62416596	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr9	65049531	65049621	snRNA	ENSMUSG00000075930_U5	.	ENSMUSG00000075930	ProperStrand	175	1	-6.8402
chr14	19101604	19101662	protein_coding	Rpl15	exon	ENSMUSG00000012405	ProperStrand	145	chr19	8798740	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-3.1516
chr16	23111777	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	chr2	118872486	118872518	tRNA	tRNA1509-SerGCT	.	546573	ProperStrand	3	1	-7.8619
chr11	5092454	5092544	protein_coding	Kremen1	utr3	ENSMUSG00000020393	ProperStrand	33	chrX	132805835	132805916	protein_coding	Ngfrap1	exon	ENSMUSG00000046432	ProperStrand	28	14	-19.5073
chr6	148303595	148303617	protein_coding	Rps4y2	exon	ENSMUSG00000063171	ProperStrand	47	chr18	35716764	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.5824
chr2	166671033	166671069	protein_coding	Arfgef2	exon	ENSMUSG00000074582	ProperStrand	32	chr16	23111379	23111469	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.2238
chr7	74385222	74385266	protein_coding	Mef2a	exon	ENSMUSG00000030557	ProperStrand	18	chr19	8798736	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	5	-19.5249
chr14	63287578	63287611	snoRNA	ENSMUSG00000089531_SNORA73	.	ENSMUSG00000089531	ProperStrand	123	chr5	130300432	130300530	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-4.0959
chr4	137308522	137308622	protein_coding	Alpl	exon	ENSMUSG00000028766	ProperStrand	80	chr16	23110464	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.9852
chr14	31828343	31828404	snoRNA	ENSMUSG00000087912_SNORD19B	.	ENSMUSG00000087912	ProperStrand	1	chr8	32260335	32260359	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-inf
chr10	60783856	60783929	protein_coding	X99384	exon	ENSMUSG00000020092	ProperStrand	60	chr1	63225283	63225322	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	2	-14.0356
chr14	70540739	70540755	protein_coding	2610301G19Rik	exon	ENSMUSG00000033712	ProperStrand	49	chr3	123210932	123210972	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.4031
chr8	28284454	28284471	protein_coding	Rab11fip1	intron	ENSMUSG00000031488	NonProperStrand	9	chrX	84483699	84483731	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-12.1312
chr18	10097592	10097631	protein_coding	Rock1	exon	ENSMUSG00000024290	ProperStrand	21	chr8	98278889	98278952	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	2	-18.7575
chr12	110884905	110888948	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr8	73419655	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-0.8268
chrX	35928319	35928336	protein_coding	Cul4b	intron	ENSMUSG00000031095	NonProperStrand	89	chr17	50379831	50379848	protein_coding	AY702103	utr3	ENSMUSG00000067103	NonProperStrand	1	1	-inf
chr4	43505656	43505698	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	NonProperStrand	174	chr8	46137161	46137231	protein_coding	Fat1	utr3	ENSMUSG00000070047	NonProperStrand	5	1	-16.3367
chr10	60562497	60562530	protein_coding	Sgpl1	utr3	ENSMUSG00000020097	ProperStrand	34	chr19	8799043	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	3	-15.8023
chr7	29171540	29171558	protein_coding	Med29	utr3	ENSMUSG00000003444	NonProperStrand	134	chr4	131908687	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	6	-4.4982
chr8	113577858	113578064	protein_coding	Aars	exon	ENSMUSG00000031960	ProperStrand	355	chr7	118219571	118219655	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-1.1838
chr13	23663267	23663308	protein_coding	Hist1h2bg	utr5	ENSMUSG00000058385	ProperStrand	29	chr8	32260335	32260424	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	2	-9.8657
chr9	44166309	44166399	protein_coding	Vps11	exon	ENSMUSG00000032127	ProperStrand	19	chr10	23505174	23505254	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.1073
chr10	59540199	59540215	protein_coding	Ascc1	intron	ENSMUSG00000044475	ProperStrand	18	chr2	26493394	26493494	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-6.0815
chr17	15087442	15087491	protein_coding-noncoding	Phf10	utr3	ENSMUSG00000023883	ProperStrand	8	chr1	39605592	39605682	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	7	-inf
chr8	127993731	127993748	protein_coding	Sipa1l2	exon	ENSMUSG00000001995	NonProperStrand	8	chr2	24915691	24915707	protein_coding	Nelf	exon	ENSMUSG00000006476	ProperStrand	40	1	-18.2024
chr11	100275659	100275677	protein_coding	Leprel4	exon	ENSMUSG00000006931	ProperStrand	32	chr11	106362638	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-8.6656
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr11	102298347	102298364	protein_coding	Fam171a2	utr3	ENSMUSG00000034685	ProperStrand	3	1	-15.0884
chr11	119927007	119927025	protein_coding	Azi1	exon	ENSMUSG00000039781	ProperStrand	24	chr9	15119630	15119720	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	6	-inf
chr8	55608539	55608584	antisense	Spcs3	.	ENSMUSG00000054408	ProperStrand	30	chr15	79908956	79908983	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-6.8444
chr1	173341933	173341949	protein_coding	Usf1	utr5	ENSMUSG00000026641	NonProperStrand	144	chr3	63822524	63822551	protein_coding	Gmps	utr3	ENSMUSG00000027823	ProperStrand	30	1	-12.9587
chr7	105649054	105649070	protein_coding	Lrrc32	utr3	ENSMUSG00000090958	NonProperStrand	3	chr11	69483136	69483188	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-8.5256
chr5	136801767	136801784	protein_coding	Cux1	intron	ENSMUSG00000029705	ProperStrand	19	chr7	118219589	118219641	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-6.4226
chr6	113325229	113325909	protein_coding	Tada3	exon	ENSMUSG00000048930	ProperStrand	13	chr1	162965989	162966040	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-6.5934
chr6	119304711	119304731	protein_coding	Adipor2	utr3	ENSMUSG00000030168	ProperStrand	79	chr7	117190020	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.8389
chr7	67124117	67124137	SINE	PB1D9	Alu	chr7PB1D967124086	NonProperStrand	1	chr17	44238108	44238125	protein_coding	Enpp4	intron	ENSMUSG00000023961	NonProperStrand	11	1	-inf
chr11	98878344	98878412	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	chr11	62416973	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	3	-1.4912
chr1	91790020	91790120	protein_coding	Agap1	utr3	ENSMUSG00000055013	ProperStrand	229	chr2	130103473	130103500	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-5.4197
chr15	98688209	98688299	protein_coding	Mll2	exon	ENSMUSG00000048154	ProperStrand	170	chr9	120039568	120039648	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.5724
chr6	125056658	125056748	protein_coding	Chd4	exon	ENSMUSG00000063870	ProperStrand	303	chr7	117166722	117166802	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	2	-3.4679
chrX	20249422	20255339	protein_coding	Uba1	exon	ENSMUSG00000001924	ProperStrand	156	chr2	26493366	26493439	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-3.7130
chr10	68578219	68578239	LTR	MT2A	ERVL	chr10MT2A68577899	ProperStrand	21	chr11	69483136	69483247	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-10.6516
chr2	79294350	79294418	protein_coding	Neurod1	exon	ENSMUSG00000034701	ProperStrand	7	chr5	108334196	108334286	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-9.1759
chr12	88778631	88778739	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	chr19	8799376	8799408	snoRNA	ENSMUSG00000065280_SNORD28	.	ENSMUSG00000065280	ProperStrand	269	1	-3.6131
chr8	86690311	86690358	protein_coding	4930432K21Rik	intron	ENSMUSG00000008129	ProperStrand	4	chr9	15118325	15118375	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-8.9841
chr16	3948964	3948980	protein_coding	Nlrc3	exon	ENSMUSG00000049871	ProperStrand	5	chr4	131908385	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-6.0411
chr8	13416895	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr9	15118283	15118377	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	12	-2.3486
mmu-miR-6240	3	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr1	177531672	177534078	protein_coding	Fh1	exon	ENSMUSG00000026526	ProperStrand	37	1	-6.8616
chr19	7359208	7359224	protein_coding	Mark2	exon	ENSMUSG00000024969	ProperStrand	75	chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	1	-10.9857
chr2	90235317	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	84042523	84045163	protein_coding	Acaca	exon	ENSMUSG00000020532	ProperStrand	100	1	-3.5047
chr9	108459307	108459376	protein_coding	Qrich1	exon	ENSMUSG00000006673	ProperStrand	30	chr9	15118284	15118321	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	3	-11.4170
chr3	107129194	107133166	protein_coding	Rbm15	exon	ENSMUSG00000048109	ProperStrand	82	chr11	55296295	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	5	-inf
chr15	37933649	37933705	protein_coding	Ubr5	exon	ENSMUSG00000037487	ProperStrand	258	chr10	110918547	110918637	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-1.0917
chr11	90198421	90198437	protein_coding	Hlf	utr3	ENSMUSG00000003949	NonProperStrand	25	chr10	79324761	79325262	protein_coding	Ptbp1	exon	ENSMUSG00000006498	ProperStrand	129	1	-13.5509
chr7	52263933	52264033	protein_coding	Scaf1	exon	ENSMUSG00000038406	ProperStrand	81	chr9	15130707	15130778	snoRNA	ENSMUSG00000077506_Scarna9	.	ENSMUSG00000077506	ProperStrand	148	1	-10.8977
chr6	53770158	53770175	protein_coding	Tril	exon	ENSMUSG00000043496	NonProperStrand	17	chr17	13112490	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	2	-11.4466
chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-4.5740
chr3	36561820	36561836	protein_coding	Trpc3	exon	ENSMUSG00000027716	ProperStrand	4	chr2	26494708	26494828	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-8.5876
chr4	116875172	116875249	snRNA	ENSMUSG00000070228_U5	.	ENSMUSG00000070228	ProperStrand	131	chr11	62416620	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	6	-18.7269
chr2	132619817	132620489	protein_coding	Chgb	exon	ENSMUSG00000027350	ProperStrand	3	chr5	116011204	116011243	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	1	-16.5603
chr4	117886232	117886381	protein_coding	Ptprf	exon	ENSMUSG00000033295	ProperStrand	337	chr14	33005139	33005236	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-1.1279
chr2	129004103	129004121	antisense	AI847159	.	ENSMUSG00000084826	NonProperStrand	63	chrX	34622913	34623024	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-3.0832
chr1	53667677	53667693	LTR	MMETn-int	ERVK	chr1MMETn-int53667521	ProperStrand	1	chr4	131865855	131865924	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr6	67231814	67233985	protein_coding	Serbp1	utr3	ENSMUSG00000036371	ProperStrand	261	chr12	106269477	106269557	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-1.5959
chr8	77633487	77633600	protein_coding	Mcm5	utr5	ENSMUSG00000005410	ProperStrand	199	chr4	118034536	118034553	protein_coding	Hyi	exon	ENSMUSG00000006395	NonProperStrand	5	1	-16.0151
chr6	55623689	55623709	LTR	MER21B	ERV1	chr6MER21B55623647	ProperStrand	1	chr9	15119665	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-inf
chr4	43505840	43505930	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr9	107813860	107813878	protein_coding	Mst1r	exon	ENSMUSG00000032584	ProperStrand	2	1	-10.3311
chr12	112215257	112215273	protein_coding	Ankrd9	exon	ENSMUSG00000037904	NonProperStrand	35	chrX	84483691	84483715	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-9.3328
chr5	141090405	141090422	protein_coding	Lfng	exon	ENSMUSG00000029570	NonProperStrand	92	chr5	122771282	122771387	protein_coding	Pptc7	utr3	ENSMUSG00000038582	ProperStrand	9	1	-16.3260
chr11	100182326	100182363	protein_coding	Eif1	exon	ENSMUSG00000035530	ProperStrand	115	chr16	23110489	23110526	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.4321
chr2	152119846	152119862	protein_coding	Tbc1d20	intron	ENSMUSG00000027465	ProperStrand	27	chr15	78981781	78981804	protein_coding	Polr2f	exon	ENSMUSG00000033020	ProperStrand	35	1	-16.0264
chr17	69581006	69581023	protein_coding	Epb4.1l3	intron	ENSMUSG00000024044	ProperStrand	28	chr1	162965530	162965591	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-7.8414
chr17	66234032	66234126	protein_coding	Ralbp1	utr5	ENSMUSG00000024096	ProperStrand	39	chr2	4974190	4974207	protein_coding	Optn	exon	ENSMUSG00000026672	ProperStrand	451	1	-10.1418
chr9	40611665	40611717	snoRNA	ENSMUSG00000075876_Snord14c	.	ENSMUSG00000075876	ProperStrand	104	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-2.6174
chr5	115750609	115750878	protein_coding	Dynll1	utr5	ENSMUSG00000009013	ProperStrand	6	chr9	120039627	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-7.9123
chr2	179921569	179921635	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr18	50228228	50228247	protein_coding	Tnfaip8	intron	ENSMUSG00000062210	NonProperStrand	3	1	-16.1220
chr14	19101620	19101710	protein_coding	Rpl15	exon	ENSMUSG00000012405	ProperStrand	145	chr17	28190859	28190939	protein_coding	Anks1	exon	ENSMUSG00000024219	ProperStrand	32	1	-12.8125
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr1	162473660	162473677	protein_coding	Rabgap1l	intron	ENSMUSG00000026721	ProperStrand	44	1	-8.4165
chr15	101919159	101919299	protein_coding	Eif4b	exon	ENSMUSG00000058655	ProperStrand	484	chr16	43886792	43886850	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	2	-6.7115
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	72922396	72922413	protein_coding	Itgae	intron	ENSMUSG00000005947	ProperStrand	16	1	-7.0757
chr2	129998658	129998715	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr1	102076757	102076795	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	3	-10.3550
chr16	11753769	11753786	protein_coding	Snx29	intron	ENSMUSG00000071669	NonProperStrand	38	chr10	23506287	23506348	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-7.8599
chrX	7352005	7352049	protein_coding	Tfe3	utr3	ENSMUSG00000000134	ProperStrand	10	chr7	118219574	118219621	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-12.5221
chr12	112908174	112910118	protein_coding	Ckb	exon	ENSMUSG00000001270	ProperStrand	28	chr16	23111372	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	5	-11.7483
chr10	76086124	76086141	protein_coding	Col6a2	utr5	ENSMUSG00000020241	ProperStrand	13	chr17	31237232	31237250	protein_coding	Abcg1	intron	ENSMUSG00000024030	ProperStrand	36	1	-17.3705
chr14	17218640	17219844	protein_coding	Top2b	exon	ENSMUSG00000017485	ProperStrand	24	chr1	89663540	89663577	protein_coding	Atg16l1	exon	ENSMUSG00000026289	ProperStrand	41	3	-inf
chr6	54379743	54379760	lincRNA	9130019P16Rik	exon	ENSMUSG00000073067	ProperStrand	255	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-6.0555
chr17	46912353	46912371	protein_coding	Rpl7l1	utr3	ENSMUSG00000063888	ProperStrand	37	chr9	120037899	120037977	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	3	-13.1504
chr9	21934462	21934478	protein_coding	Acp5	exon	ENSMUSG00000001348	ProperStrand	66	chr9	21440146	21440171	protein_coding	Smarca4	utr5	ENSMUSG00000032187	ProperStrand	196	1	-10.7471
chr19	6985413	6985461	protein_coding	Trmt112	utr3	ENSMUSG00000038812	ProperStrand	6	chr19	8963082	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-11.1401
chr8	129468746	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	chr14	76372292	76372426	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	4	-4.1676
chr14	25311310	25313871	protein_coding	Rps24	exon	ENSMUSG00000025290	ProperStrand	110	chr19	8963078	8963174	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	7	-11.7240
chr18	62665097	62665145	protein_coding	Fbxo38	intron	ENSMUSG00000042211	ProperStrand	18	chr2	26494750	26494840	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.4011
chr15	37538107	37538129	protein_coding	Ncald	intron	ENSMUSG00000051359	NonProperStrand	12	chr7	29136525	29136575	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.3856
chr14	63765466	63765525	protein_coding	Fdft1	utr3	ENSMUSG00000021273	ProperStrand	37	chr10	80640847	80640903	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-7.0588
chr17	24857731	24857821	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	chr3	123210854	123210909	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	NonProperStrand	45	2	-4.8746
chr9	110289519	110289603	protein_coding	Ptpn23	exon	ENSMUSG00000036057	ProperStrand	34	chr8	73419654	73419682	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.1854
chr9	53056072	53056088	protein_coding	Ddx10	exon	ENSMUSG00000053289	ProperStrand	40	chr19	8798484	8798553	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-6.0069
chr2	163485034	163485051	protein_coding	Pkig	intron	ENSMUSG00000035268	ProperStrand	13	chr7	52381759	52381784	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-10.6792
chr9	64023063	64025823	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	chr11	6428035	6428098	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-0.8981
chr4	116875158	116875248	snRNA	ENSMUSG00000070228_U5	.	ENSMUSG00000070228	ProperStrand	131	chrX	34622908	34622988	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-1.8451
chr4	59256725	59256744	LTR	MLT1D	MaLR	chr4MLT1D59256607	NonProperStrand	1	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr9	35022413	35022453	protein_coding	Srpr	exon	ENSMUSG00000032042	ProperStrand	54	chr5	108334213	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	4	-15.6482
chr2	22850206	22895564	protein_coding	Abi1	exon	ENSMUSG00000058835	ProperStrand	24	chr17	24665447	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-6.7492
chr12	60575476	60575494	LINE	L1_Mus4	L1	chr12L1_Mus460575423	ProperStrand	33	chr5	130019100	130019139	protein_coding	Sfswap	exon	ENSMUSG00000029439	ProperStrand	34	1	-15.6484
chr9	119266766	119266782	protein_coding	Xylb	exon	ENSMUSG00000035769	ProperStrand	8	chr17	3532848	3532948	protein_coding	Tfb1m	intron	ENSMUSG00000036983	ProperStrand	2	2	-inf
chr8	126554709	126554760	protein_coding	Urb2	exon	ENSMUSG00000031976	ProperStrand	64	chr11	106362342	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	3	-13.2436
chr3	122199199	122199289	protein_coding	Bcar3	intron	ENSMUSG00000028121	ProperStrand	21	chr16	23110900	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-6.5949
chr6	122681590	122681606	protein_coding	Slc2a3	exon	ENSMUSG00000003153	ProperStrand	682	chr1	88252836	88252898	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	2	-3.7875
chr16	23111371	23111461	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	NonProperStrand	38	chr9	120037910	120037990	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	NonProperStrand	19	1	-16.6149
chr9	56334570	56334588	protein_coding	Hmg20a	intron	ENSMUSG00000032329	ProperStrand	87	chr4	131908686	131908794	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-1.5746
chr16	23109027	23109087	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	chr6	124665375	124665436	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	7	-12.0693
chr9	78023165	78023246	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr1	172975116	172975189	tRNA	tRNA699-GlyGCC	.	856786	ProperStrand	660	2	-2.9016
chr2	121782228	121782274	protein_coding	Ctdspl2	utr5	ENSMUSG00000033411	ProperStrand	11	chr1	162966008	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-6.9371
chr19	10092798	10092814	protein_coding	Rab3il1	utr5	ENSMUSG00000024663	ProperStrand	14	chr14	8761614	8761640	protein_coding	Flnb	exon	ENSMUSG00000025278	ProperStrand	124	1	-14.8270
chr17	10400758	10400845	protein_coding	Qk	utr3	ENSMUSG00000062078	ProperStrand	63	chr4	131908686	131908753	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-2.2537
chr4	154485626	154485658	protein_coding	Morn1	exon	ENSMUSG00000029049	ProperStrand	7	chr3	89749432	89749468	protein_coding	Atp8b2	exon	ENSMUSG00000060671	ProperStrand	140	1	-16.0104
chr4	107559885	107559975	protein_coding	Magoh	utr3	ENSMUSG00000028609	ProperStrand	5	chr9	120039537	120039617	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-8.3145
chr15	85692863	85692953	protein_coding	Gtse1	exon	ENSMUSG00000022385	ProperStrand	74	chr7	117189874	117189954	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.9546
chr6	81915798	81915842	protein_coding	Mrpl19	exon	ENSMUSG00000030045	ProperStrand	4	chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	1	-15.5110
chr9	110544350	110544366	protein_coding	Nbeal2	exon	ENSMUSG00000056724	ProperStrand	161	chr1	88252837	88252886	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-4.7138
chr7	4610182	4610272	protein_coding	Ppp6r1	utr5	ENSMUSG00000052296	ProperStrand	20	chr11	68886944	68887024	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-6.2916
chr8	13760537	13760559	protein_coding	Cdc16	exon	ENSMUSG00000038416	ProperStrand	28	chr4	131865855	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.0580
chr17	24561415	24562068	protein_coding	Rnps1	exon	ENSMUSG00000034681	ProperStrand	40	chr16	23110941	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.7072
chr5	118477951	118477967	protein_coding	Tesc	exon	ENSMUSG00000029359	ProperStrand	114	chr19	4838897	4839242	protein_coding	Ccs	utr5	ENSMUSG00000034108	ProperStrand	5	1	-17.1020
chr1	155747137	155750101	protein_coding	Glul	utr5	ENSMUSG00000026473	ProperStrand	54	chr5	111121070	111121150	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-6.6431
chr2	146125209	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	chr18	35714171	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-1.5564
chr1	63226138	63226154	protein_coding	Eef1b2	exon	ENSMUSG00000025967	ProperStrand	106	chr17	13112530	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	3	-8.7104
chr19	3356363	3356387	protein_coding	Cpt1a	exon	ENSMUSG00000024900	ProperStrand	48	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-9.2338
chr2	157288754	157288773	protein_coding	Src	exon	ENSMUSG00000027646	ProperStrand	32	chr12	110918156	110918221	snoRNA	ENSMUSG00000065749_AF357428	.	ENSMUSG00000065749	ProperStrand	218	5	-inf
chr10	75969130	75969220	protein_coding	Mcm3ap	exon	ENSMUSG00000001150	ProperStrand	95	chr8	113577170	113577834	protein_coding	Aars	exon	ENSMUSG00000031960	ProperStrand	355	1	-8.8307
chr5	46093591	46093626	protein_coding	Lcorl	intron	ENSMUSG00000015882	NonProperStrand	6	chr16	23110916	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-6.6757
chr10	24552200	24552217	protein_coding	Enpp3	intron	ENSMUSG00000019989	ProperStrand	6	chr5	121655099	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-8.3778
chr11	93954170	93954269	protein_coding	Spag9	exon	ENSMUSG00000020859	ProperStrand	23	chr5	92485086	92485144	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	4	-20.4786
chr12	81274028	81274128	protein_coding	Actn1	exon	ENSMUSG00000015143	ProperStrand	128	chr18	35102297	35102339	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-5.1060
chr6	52298928	52299018	LTR	IAPEz-int	ERVK	chr6IAPEz-int52298819	NonProperStrand	1	chr6	52298675	52298765	LTR	IAPLTR2_Mm	ERVK	chr6IAPLTR2_Mm52298387	NonProperStrand	1	1	-inf
chr12	77381683	77383941	protein_coding	Mthfd1	exon	ENSMUSG00000021048	ProperStrand	71	chr7	87025457	87027388	protein_coding	Ap3s2	exon	ENSMUSG00000063801	ProperStrand	20	1	-15.1975
chr11	60367859	60367993	protein_coding	Alkbh5	utr3	ENSMUSG00000042650	ProperStrand	203	chr14	33005140	33005160	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-1.8604
chr1	63225609	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	chr9	15118245	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	11	-2.3983
chr4	106349057	106349137	protein_coding-noncoding	Ttc4	utr3	ENSMUSG00000025413	ProperStrand	1	chr4	106348880	106348970	protein_coding	Ttc4	intron	ENSMUSG00000025413	ProperStrand	16	1	-inf
chr7	138459653	138459669	protein_coding	Cuzd1	exon	ENSMUSG00000040205	NonProperStrand	59	chr10	23505222	23505279	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.2562
chr17	36000485	36000501	protein_coding	Nrm	exon	ENSMUSG00000059791	ProperStrand	253	chr11	6428103	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-1.8703
chr3	85944570	85944612	snoRNA	ENSMUSG00000064390_Rnu73b	.	ENSMUSG00000064390	ProperStrand	164	chr11	69481387	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-1.5290
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr16	23110454	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	10	-1.8768
chr2	32645036	32645070	protein_coding	Stxbp1	utr3	ENSMUSG00000026797	ProperStrand	33	chr11	117827608	117827666	protein_coding	Socs3	utr3	ENSMUSG00000053113	ProperStrand	137	1	-12.8632
chr14	115901448	115901464	protein_coding	Gpc5	intron	ENSMUSG00000022112	ProperStrand	21	chr9	53424614	53424676	protein_coding	Cul5	utr3	ENSMUSG00000032030	ProperStrand	87	1	-14.6923
chr7	119785308	119785329	lincRNA	2310014F06Rik	intron	ENSMUSG00000085945	NonProperStrand	25	chr14	37934742	37934760	protein_coding	Ghitm	utr3	ENSMUSG00000041028	NonProperStrand	11	1	-18.2024
chr5	127728745	127728761	protein_coding	Tmem132c	intron	ENSMUSG00000034324	ProperStrand	25	chr2	30929809	30929841	protein_coding	Fnbp1	intron	ENSMUSG00000075415	ProperStrand	53	1	-15.3284
chr6	136600285	136600302	protein_coding	Plbd1	exon	ENSMUSG00000030214	NonProperStrand	5	chr16	23110498	23110588	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-7.3464
chr16	23111374	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	chr17	71980620	71980705	snoRNA	ENSMUSG00000093289_Snord92	.	ENSMUSG00000093289	ProperStrand	56	6	-9.7899
chr8	51570778	51570858	LINE	L1_Mm	L1	chr8L1_Mm51570654	NonProperStrand	1	chr8	51570902	51570992	LINE	Lx3A	L1	chr8Lx3A51570837	ProperStrand	1	1	-inf
chr17	33795849	33801573	protein_coding	Hnrnpm	exon	ENSMUSG00000059208	ProperStrand	56	chr16	23110902	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-0.9026
chr14	31953025	31953118	protein_coding	Stab1	exon	ENSMUSG00000042286	NonProperStrand	127	chr19	8798483	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-6.3819
chr9	113650889	113650906	protein_coding	Clasp2	exon	ENSMUSG00000033392	NonProperStrand	20	chr9	78326841	78326878	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-8.5388
chr14	61359451	61359468	protein_coding	Spata13	intron	ENSMUSG00000021990	ProperStrand	28	chr2	17947550	17947566	protein_coding	A930004D18Rik	utr3	ENSMUSG00000054057	ProperStrand	17	1	-17.3942
chr11	69870769	69870785	protein_coding	Asgr1	exon	ENSMUSG00000020884	NonProperStrand	145	chr4	139130870	139130961	protein_coding	Iffo2	exon	ENSMUSG00000041025	ProperStrand	8	1	-15.6630
chr5	115940324	115940407	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	chr5	130300457	130300553	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	31	-inf
chr18	35097314	35101702	protein_coding	Hspa9	exon	ENSMUSG00000024359	ProperStrand	166	chr4	131865860	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	6	-5.3078
chr2	164664779	164664879	protein_coding	Ctsa	utr3	ENSMUSG00000017760	ProperStrand	36	chr12	104317206	104317223	protein_coding	Unc79	exon	ENSMUSG00000021198	ProperStrand	99	3	-21.0118
chr2	25915656	25915672	protein_coding	Nacc2	exon	ENSMUSG00000026932	ProperStrand	98	chr15	103073422	103073460	protein_coding	Hnrnpa1	exon	ENSMUSG00000046434	ProperStrand	68	1	-12.0755
chr19	38869531	38869547	protein_coding	Noc3l	exon	ENSMUSG00000024999	NonProperStrand	149	chr4	130305550	130305620	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	1	-8.0903
chr4	147996215	147999317	protein_coding	Tardbp	exon	ENSMUSG00000041459	ProperStrand	120	chr8	129468800	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-3.1271
chr5	111121064	111121193	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	chr11	48670537	48670559	tRNA	tRNA2021-LeuAAG	.	710492	ProperStrand	13	3	-19.2028
chr9	89379588	89379678	LINE	L1MB2	L1	chr9L1MB289379540	ProperStrand	1	chr9	89379234	89379324	LINE	Lx8	L1	chr9Lx889378911	ProperStrand	1	1	-inf
chr18	35716852	35716891	lincRNA	Snhg4	intron	ENSMUSG00000090430	ProperStrand	270	chr18	83126417	83126517	protein_coding	Zfp516	exon	ENSMUSG00000058881	ProperStrand	25	1	-12.0694
chr16	36071984	36072000	protein_coding	Ccdc58	utr5	ENSMUSG00000075229	NonProperStrand	55	chr10	23506322	23506347	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-7.1205
chr3	152450607	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	chr3	108357255	108357355	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-0.8358
chr15	102126882	102126901	protein_coding	Espl1	intron	ENSMUSG00000058290	ProperStrand	172	chr11	120207199	120207293	protein_coding	Actg1	utr3	ENSMUSG00000062825	ProperStrand	178	1	-9.0211
chr18	42919484	42919507	protein_coding	Ppp2r2b	intron	ENSMUSG00000024500	ProperStrand	25	chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-8.2068
chr8	113447146	113447169	protein_coding	St3gal2	intron	ENSMUSG00000031749	ProperStrand	206	chr8	46102826	46102926	protein_coding	Fat1	exon	ENSMUSG00000070047	ProperStrand	306	1	-7.5845
chr7	30614464	30614480	protein_coding	Zfp790	exon	ENSMUSG00000011427	ProperStrand	2	chr1	24620949	24621042	protein_coding	Gm10925	utr3	ENSMUSG00000090378	ProperStrand	320	1	-17.5144
chr7	140182805	140183246	protein_coding	Ctbp2	exon	ENSMUSG00000030970	ProperStrand	89	chr4	122968631	122968718	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-5.5069
chr17	24869755	24869771	protein_coding	Rpl3l	utr5	ENSMUSG00000002500	NonProperStrand	56	chr4	131865854	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.8759
chr8	113361277	113362133	protein_coding	Sf3b3	exon	ENSMUSG00000033732	ProperStrand	181	chr11	62416593	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-3.0941
chr16	17031848	17031886	protein_coding	Mapk1	intron	ENSMUSG00000063358	ProperStrand	67	chr16	23110455	23110563	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	9	-19.3486
chrX	70602559	70602583	protein_coding	Zfp275	utr3	ENSMUSG00000031365	ProperStrand	9	chr4	131908356	131908431	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-11.8511
chr14	66093251	66093268	LTR	MLT1A1	MaLR	chr14MLT1A166093179	ProperStrand	31	chr16	23111689	23111803	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-7.7948
chr3	27387178	27387194	protein_coding	Fndc3b	exon	ENSMUSG00000039286	NonProperStrand	14	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-10.1508
chr13	42397061	42397082	protein_coding	Edn1	utr5	ENSMUSG00000021367	NonProperStrand	8	chr1	162967490	162967509	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-7.4644
chr11	117829346	117829446	protein_coding	Socs3	exon	ENSMUSG00000053113	ProperStrand	137	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-2.0524
chr11	102933022	102933051	protein_coding	Plcd3	exon	ENSMUSG00000020937	ProperStrand	9	chr13	56353448	56353465	protein_coding	Neurog1	utr5	ENSMUSG00000048904	ProperStrand	105	1	-16.0686
chr6	136772871	136772942	protein_coding	Wbp11	exon	ENSMUSG00000030216	ProperStrand	87	chr4	131865879	131865979	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.2262
chr19	4287063	4287090	protein_coding	Adrbk1	utr3	ENSMUSG00000024858	ProperStrand	37	chr4	131865891	131865986	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.5639
chr17	32498549	32498607	protein_coding	Wiz	exon	ENSMUSG00000024050	ProperStrand	26	chr3	137527658	137528112	protein_coding	H2afz	exon	ENSMUSG00000037894	ProperStrand	72	1	-14.6434
chr19	8799591	8799644	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	chr11	6520377	6520440	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	1	-1.6377
chr8	87393042	87393069	protein_coding	Farsa	utr3	ENSMUSG00000003808	ProperStrand	21	chr7	29136543	29136606	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-10.4562
chr16	57391760	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr9	44142960	44143034	protein_coding	H2afx	exon	ENSMUSG00000049932	ProperStrand	137	1	-6.1572
chr1	71646981	71647037	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr9	109973546	109973636	protein_coding	Mtap4	exon	ENSMUSG00000032479	ProperStrand	188	1	-5.5780
chr3	108128667	108128683	protein_coding	Sort1	exon	ENSMUSG00000068747	NonProperStrand	6	chr6	115758071	115758101	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-10.1855
chr17	34730994	34731198	protein_coding	Pbx2	exon	ENSMUSG00000034673	ProperStrand	19	chr16	23110829	23110919	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7016
chr6	87795531	87795654	protein_coding	Cnbp	exon	ENSMUSG00000030057	ProperStrand	46	chr16	35933261	35933278	protein_coding	Dtx3l	exon	ENSMUSG00000049502	NonProperStrand	3	1	-21.2914
chr2	168426898	168426915	protein_coding	Nfatc2	intron	ENSMUSG00000027544	NonProperStrand	49	chr4	131865855	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-5.7406
chr9	78327502	78327558	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr7	67123693	67123755	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	3	-7.1438
chr4	155482319	155482335	LTR	RMER21A	ERV1	chr4RMER21A155481984	ProperStrand	7	chr9	15119666	15119766	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-6.8089
chr1	55146029	55147626	protein_coding	Hspe1	exon	ENSMUSG00000073676	ProperStrand	31	chr7	52378398	52378462	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	2	-15.5476
chr10	127522193	127525468	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr4	132394297	132394418	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	4	-14.3779
chr2	172833798	172834952	protein_coding	Rae1	exon	ENSMUSG00000027509	ProperStrand	38	chr5	74489543	74489678	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	23	-20.8318
chr8	100504945	100505025	LTR	RLTR25A	ERVK	chr8RLTR25A100503958	ProperStrand	1	chr15	100297054	100297144	lincRNA	5330439K02Rik	intron	ENSMUSG00000092050	ProperStrand	1	1	-inf
chr7	140175719	140175819	protein_coding	Zranb1	utr3	ENSMUSG00000030967	ProperStrand	13	chr2	26494703	26494756	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-6.0562
chr10	127962583	127962600	protein_coding	Esyt1	exon	ENSMUSG00000025366	NonProperStrand	32	chr11	97642958	97643047	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.5978
chr17	13159943	13159965	protein_coding	Wtap	utr3	ENSMUSG00000060475	ProperStrand	119	chr2	26494708	26494826	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.9402
chr4	138931842	138931887	protein_coding	C230096C10Rik	utr3	ENSMUSG00000078517	ProperStrand	69	chr11	51551286	51551386	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	2	-11.8977
chr10	58633686	58639677	protein_coding	Sept10	exon	ENSMUSG00000019917	ProperStrand	34	chr4	131865853	131865931	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	10	-20.1270
chr10	79244234	79244255	protein_coding	Prss57	utr3	ENSMUSG00000020323	ProperStrand	13	chr11	118900007	118900024	protein_coding	Cbx8	exon	ENSMUSG00000025578	ProperStrand	95	1	-15.5082
chr11	8870596	8870614	protein_coding	Pkd1l1	intron	ENSMUSG00000046634	NonProperStrand	15	chr17	39985585	39985654	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-8.7194
chr8	113340215	113344751	protein_coding	Sf3b3	exon	ENSMUSG00000033732	ProperStrand	181	chr14	33005085	33005165	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	2	-3.6765
chr2	90235292	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	83111671	83111687	protein_coding	1700003E16Rik	exon	ENSMUSG00000030030	ProperStrand	352	1	-1.4088
chr9	15119733	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	chr9	15130742	15130778	snoRNA	ENSMUSG00000077506_Scarna9	.	ENSMUSG00000077506	ProperStrand	148	1	-1.2172
chr2	91532953	91533016	protein_coding	Atg13	intron	ENSMUSG00000027244	ProperStrand	22	chr7	116664812	116664902	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-4.3947
chr16	70537136	70537153	protein_coding	Gbe1	intron	ENSMUSG00000022707	NonProperStrand	17	chr18	35716684	35716745	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.4666
chr11	22915852	22915878	protein_coding	Fam161a	exon	ENSMUSG00000049811	ProperStrand	3	chr7	116664814	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-14.6076
chr12	105927583	105927687	protein_coding	Dicer1	utr3	ENSMUSG00000041415	ProperStrand	61	chr17	24857725	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	4	-8.4094
chr15	81305525	81305576	protein_coding	Rbx1	utr3	ENSMUSG00000022400	ProperStrand	78	chr18	45718263	45718280	protein_coding	Kcnn2	intron	ENSMUSG00000054477	ProperStrand	26	1	-14.4698
chr10	92700540	92701712	protein_coding	Cdk17	exon	ENSMUSG00000020015	ProperStrand	21	chr2	84282353	84282433	protein_coding	Tfpi	utr3	ENSMUSG00000027082	ProperStrand	9	1	-18.7840
chr16	55969699	55969742	protein_coding	Rpl24	exon	ENSMUSG00000022601	ProperStrand	149	chr19	8963027	8963083	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-0.9398
chr13	21871792	21871822	protein_coding	Hist1h1b	exon	ENSMUSG00000058773	ProperStrand	65	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	3	-11.9045
chr11	103511000	103511018	protein_coding	Rprml	utr5	ENSMUSG00000046215	NonProperStrand	1	chr14	47452040	47452091	protein_coding	Cgrrf1	intron	ENSMUSG00000055128	ProperStrand	1	1	-inf
chr2	121949510	121949527	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	chr7	134110716	134111233	protein_coding	Sez6l2	exon	ENSMUSG00000030683	ProperStrand	94	1	-9.3974
chr17	24371373	24371428	protein_coding	Ccnf	exon	ENSMUSG00000072082	NonProperStrand	1	chr11	69483149	69483249	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	NonProperStrand	35	1	-inf
chr17	34975337	34975529	protein_coding	Dom3z	exon	ENSMUSG00000040482	ProperStrand	4	chr8	53422353	53422433	snRNA	ENSMUSG00000064682_U2	.	ENSMUSG00000064682	ProperStrand	55	1	-18.9702
chr19	6281260	6294235	protein_coding	Ehd1	exon	ENSMUSG00000024772	ProperStrand	30	chr17	13112530	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-5.9331
chr7	86287307	86287407	protein_coding	Mfge8	exon	ENSMUSG00000030605	ProperStrand	73	chr4	116826699	116826718	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-6.3932
chr2	165205928	165205951	protein_coding	Zfp334	exon	ENSMUSG00000017667	ProperStrand	8	chr3	138213938	138216580	protein_coding	Eif4e	exon	ENSMUSG00000028156	ProperStrand	25	1	-18.7520
chr7	143781768	143781784	LINE	Lx9	L1	chr7Lx9143781715	ProperStrand	23	chr14	35123982	35124033	protein_coding	Glud1	utr5	ENSMUSG00000021794	ProperStrand	72	1	-14.8855
chr19	57115471	57115487	protein_coding-noncoding	Ablim1	utr3	ENSMUSG00000025085	ProperStrand	20	chr11	62416951	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-8.2434
chr1	74565501	74565517	protein_coding	Rqcd1	exon	ENSMUSG00000026174	ProperStrand	16	chr7	52381719	52381758	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-10.2494
chr4	126699283	126699328	protein_coding	Sfpq	exon	ENSMUSG00000028820	ProperStrand	340	chr8	129468746	129468831	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-1.4215
chr4	150538028	150538044	protein_coding	Camta1	exon	ENSMUSG00000014592	ProperStrand	170	chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-4.4302
chr6	97968692	97968770	protein_coding	Mitf	utr3	ENSMUSG00000035158	ProperStrand	6	chr11	68886962	68887033	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	2	-14.2538
chr9	21483586	21490476	protein_coding	Smarca4	exon	ENSMUSG00000032187	ProperStrand	196	chr1	102076758	102076790	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	1	-7.0754
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr10	13432364	13432381	protein_coding	Aig1	intron	ENSMUSG00000019806	ProperStrand	49	1	-8.2005
chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	chr11	33052846	33053997	protein_coding	Npm1	exon	ENSMUSG00000057113	ProperStrand	352	1	-6.7507
chr9	44143196	44143244	protein_coding	H2afx	exon	ENSMUSG00000049932	ProperStrand	137	chr2	66343068	66346581	protein_coding	Scn9a	exon	ENSMUSG00000075316	ProperStrand	58	1	-11.7242
chr10	70847770	70847806	protein_coding	Ipmk	utr3	ENSMUSG00000060733	ProperStrand	22	chr10	23505152	23505212	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.8416
chr14	41720068	41720120	protein_coding	Tspan14	utr3	ENSMUSG00000037824	ProperStrand	31	chr15	79913288	79913339	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	4	-15.2992
chr11	6319589	6319640	protein_coding	Ppia	utr3	ENSMUSG00000071866	ProperStrand	127	chr1	162967540	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-3.8697
chr15	76346673	76346690	protein_coding	Scrt1	utr3	ENSMUSG00000048385	NonProperStrand	13	chr19	8963027	8963081	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.1201
chr1	133252344	133252401	protein_coding	Srgap2	intron	ENSMUSG00000026425	ProperStrand	299	chr14	33005138	33005236	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-1.2886
chr10	75322118	75322190	protein_coding	Mif	utr3	ENSMUSG00000033307	ProperStrand	146	chr2	26493390	26493480	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-2.1729
chr6	45965480	46120177	protein_coding	Cntnap2	exon	ENSMUSG00000039419	NonProperStrand	283	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-2.9185
chr2	146125209	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	chr2	144091716	144091793	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	ProperStrand	549	3	-15.1076
chr9	120040185	120040269	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	chr2	158182156	158182188	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	2	-3.0330
chr2	120996550	120996567	protein_coding	Tubgcp4	intron	ENSMUSG00000027263	ProperStrand	30	chr16	23110965	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0481
chr12	107300911	107301012	protein_coding	Vrk1	exon	ENSMUSG00000021115	ProperStrand	10	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	7	-inf
chr11	19369717	19369737	LTR	ORR1E	MaLR	chr11ORR1E19369719	NonProperStrand	1	chr7	29136525	29136574	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-inf
chr7	29101155	29101384	protein_coding	Supt5h	exon	ENSMUSG00000003435	ProperStrand	123	chr10	80641599	80641634	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-4.7026
chr4	136097515	136097574	protein_coding	Luzp1	exon	ENSMUSG00000001089	ProperStrand	35	chr13	58400751	58400770	protein_coding	Kif27	intron	ENSMUSG00000060176	ProperStrand	75	1	-13.9536
chr16	98256736	98256826	LTR	IAPEz-int	ERVK	chr16IAPEz-int98256740	ProperStrand	1	chr16	98256584	98256674	LTR	MMETn-int	ERVK	chr16MMETn-int98252720	ProperStrand	1	1	-inf
chr2	118572486	118572545	antisense	5430417L22Rik	.	ENSMUSG00000074918	ProperStrand	5	chr2	165205621	165205637	protein_coding	Zfp334	exon	ENSMUSG00000017667	NonProperStrand	33	1	-18.3669
chr15	82980127	82980227	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr7	67123693	67123756	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	2	-5.9494
chr10	93323492	93323508	protein_coding	Metap2	utr3	ENSMUSG00000036112	ProperStrand	78	chr2	26494771	26494827	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.6435
chr4	137866632	137866763	protein_coding	Ddost	exon	ENSMUSG00000028757	ProperStrand	49	chr9	15119736	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.9863
chr11	77840861	77840877	protein_coding	Phf12	exon	ENSMUSG00000037791	ProperStrand	21	chr16	23111384	23111474	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.9586
chr4	43505837	43505912	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr5	35448325	35448342	protein_coding	Lrpap1	utr5	ENSMUSG00000029103	ProperStrand	43	1	-3.6800
chr9	26440743	26440759	DNA	MER5A	MER1_type	chr9MER5A26440741	ProperStrand	108	chr1	162965531	162965596	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.2505
chr15	82968787	82968832	protein_coding	Poldip3	exon	ENSMUSG00000041815	ProperStrand	57	chr10	23505179	23505269	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-2.4981
chr8	124406230	124406255	protein_coding	Slc7a5	utr3	ENSMUSG00000040010	ProperStrand	166	chr16	23111758	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-1.2279
chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	chr19	8799581	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	2	-5.2931
chr9	109970148	109971212	protein_coding	Mtap4	exon	ENSMUSG00000032479	ProperStrand	188	chr14	63287574	63287611	snoRNA	ENSMUSG00000089531_SNORA73	.	ENSMUSG00000089531	ProperStrand	123	2	-15.1502
chr6	124782612	124782631	protein_coding	Cdca3	exon	ENSMUSG00000023505	ProperStrand	24	chr9	120037905	120038029	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	5	-19.7045
chr4	40173641	40173657	protein_coding	Ddx58	exon	ENSMUSG00000040296	NonProperStrand	1	chr7	148634701	148634837	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	NonProperStrand	18	1	-inf
chr10	28119269	28119286	protein_coding	Ptprk	intron	ENSMUSG00000019889	ProperStrand	45	chr2	158457348	158457365	protein_coding	Actr5	exon	ENSMUSG00000037761	NonProperStrand	94	1	-12.9916
chr6	47748470	47748560	protein_coding	Pdia4	exon	ENSMUSG00000025823	ProperStrand	41	chr2	26493402	26493482	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-4.4627
chr12	17287729	17287819	protein_coding	Pdia6	exon	ENSMUSG00000020571	ProperStrand	114	chr7	116664809	116664889	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-2.8400
chr11	6319542	6319563	protein_coding	Ppia	exon	ENSMUSG00000071866	ProperStrand	127	chr9	15119646	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	8	-14.5069
chr15	85411909	85411925	protein_coding	Wnt7b	utr5	ENSMUSG00000022382	ProperStrand	21	chr9	78046175	78047304	protein_coding	Gsta4	exon	ENSMUSG00000032348	ProperStrand	82	1	-14.8106
chr7	122612438	122612457	LTR	MTEa	MaLR	chr7MTEa122612326	NonProperStrand	9	chr2	26494715	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-6.8145
chr13	9833553	9833669	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr13	45009696	45009733	protein_coding	Jarid2	exon	ENSMUSG00000038518	ProperStrand	372	3	-4.8295
chr12	31963348	31963428	protein_coding	Lamb1	exon	ENSMUSG00000002900	ProperStrand	87	chr1	162967490	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-2.8060
chr17	87832888	87834503	protein_coding	Calm2	utr3	ENSMUSG00000036438	ProperStrand	59	chr16	23110906	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-0.8243
chr10	120415416	120415475	protein_coding	Lemd3	exon	ENSMUSG00000048661	ProperStrand	32	chr14	52829459	52829544	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-9.4670
chr7	120478996	120495344	protein_coding	Btbd10	exon	ENSMUSG00000038187	ProperStrand	4	chr4	116826699	116826764	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-12.4381
chr18	37106704	37106721	protein_coding	Pcdha3	exon	ENSMUSG00000091969	NonProperStrand	4	chr14	76247752	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-15.8899
chr6	45965480	46120177	protein_coding	Cntnap2	exon	ENSMUSG00000039419	NonProperStrand	283	chr17	39985620	39985664	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-2.9997
chr11	102298944	102299009	protein_coding	Fam171a2	exon	ENSMUSG00000034685	ProperStrand	3	chr4	131866154	131866211	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-9.8903
chr17	28536893	28536990	protein_coding	Fkbp5	utr3	ENSMUSG00000024222	ProperStrand	44	chr3	126773560	126773582	protein_coding	Ank2	intron	ENSMUSG00000032826	ProperStrand	30	1	-15.3590
chr4	68423441	68423457	protein_coding	Dbc1	exon	ENSMUSG00000028351	ProperStrand	78	chr17	13115666	13115737	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	1	-7.0115
chr16	91405676	91405692	protein_coding	Ifnar2	utr3	ENSMUSG00000022971	NonProperStrand	23	chr1	88252837	88252901	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-8.5640
chr15	81547119	81549203	protein_coding	Rangap1	exon	ENSMUSG00000022391	ProperStrand	69	chr4	131865855	131865917	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-4.5290
chr2	94261504	94261604	protein_coding	Api5	intron	ENSMUSG00000027193	ProperStrand	51	chr4	131865865	131865890	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.0255
chr11	48616641	48616698	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	chr10	23505552	23505602	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	2	-6.2624
chrX	71517861	71517941	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	chr11	83107805	83107895	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	1	-2.3555
chrX	49970819	49970835	antisense	A630012P03Rik	.	ENSMUSG00000055110	NonProperStrand	10	chr4	108302192	108302324	protein_coding	Cc2d1b	exon	ENSMUSG00000028582	ProperStrand	13	1	-22.1951
chr10	80949585	80949651	protein_coding	Ncln	utr3	ENSMUSG00000020238	ProperStrand	18	chr18	82662186	82662202	protein_coding	Mbp	intron	ENSMUSG00000041607	NonProperStrand	185	1	-13.4973
chr8	122129036	122129052	protein_coding	Taf1c	utr5	ENSMUSG00000031832	ProperStrand	26	chr2	66385173	66385189	protein_coding	Scn9a	exon	ENSMUSG00000075316	ProperStrand	58	1	-15.0665
chr8	95505795	95505812	protein_coding	Slc6a2	exon	ENSMUSG00000055368	NonProperStrand	21	chr12	17552950	17553063	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-7.1708
chr19	47898569	47898592	protein_coding	Wdr96	intron	ENSMUSG00000044948	NonProperStrand	11	chr5	130300419	130300540	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-13.6248
chrX	132673816	132673833	protein_coding	Bex4	intron	ENSMUSG00000047844	NonProperStrand	70	chr14	76247742	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-3.8819
chr6	15600938	15600962	SINE	B1_Mus2	Alu	chr6B1_Mus215600923	NonProperStrand	1	chr5	147646780	147646848	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	1	-inf
chr2	30133993	30134093	protein_coding	Lrrc8a	intron	ENSMUSG00000007476	ProperStrand	17	chr7	116663721	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-11.6904
chr17	4082133	4082161	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr19	5800812	5800859	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	3	-10.2823
chr14	55262792	55262870	protein_coding	Acin1	exon	ENSMUSG00000022185	ProperStrand	67	chr18	75161534	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	2	-11.2398
chr12	101129394	101129437	protein_coding	Tdp1	exon	ENSMUSG00000021177	ProperStrand	23	chr4	116826727	116826766	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	3	-18.8254
chr2	60194519	60194563	protein_coding	Ly75	intron	ENSMUSG00000026980	ProperStrand	59	chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-7.8946
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr1	18204299	18204315	pseudogene	Defb44-ps	.	ENSMUSG00000070977	ProperStrand	37	1	-9.5655
chr11	84653823	84653862	protein_coding	Ggnbp2	exon	ENSMUSG00000020530	ProperStrand	30	chr2	37396559	37396649	protein_coding	Rabgap1	exon	ENSMUSG00000035437	ProperStrand	20	7	-21.0278
chr6	51411835	51411855	protein_coding	Hnrnpa2b1	utr3	ENSMUSG00000004980	ProperStrand	166	chr7	117418239	117418298	protein_coding	Swap70	exon	ENSMUSG00000031015	ProperStrand	47	2	-19.1004
chr1	102076758	102076790	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-5.1553
chr6	55013175	55013236	protein_coding	Gars	exon	ENSMUSG00000029777	ProperStrand	71	chr16	23111392	23111478	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.0362
chr15	82980102	82980225	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr18	35716696	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	13	-0.9185
chr10	80827309	80827354	protein_coding	Mfsd12	utr3	ENSMUSG00000034854	ProperStrand	7	chr16	23110937	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.4785
chr1	190798183	190798283	protein_coding	Kctd3	exon	ENSMUSG00000026608	ProperStrand	28	chr5	130300521	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.8897
chr2	65479887	65479905	protein_coding	Scn2a1	intron	ENSMUSG00000075318	NonProperStrand	11	chr11	6428060	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-6.4917
chr7	116663633	116663767	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	chr7	52382752	52382832	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	14	-1.2411
chr11	8350120	8350898	protein_coding	Tns3	exon	ENSMUSG00000020422	ProperStrand	81	chr15	79908929	79909019	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-4.8900
chr16	57391759	57391777	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr1	162965980	162965996	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	NonProperStrand	8	1	-14.4359
chr7	24779190	24779213	SINE	ID_B1	B4	chr7ID_B124779183	NonProperStrand	54	chr13	96374713	96374729	protein_coding	F2r	exon	ENSMUSG00000048376	NonProperStrand	88	1	-12.7549
chr13	73938520	73942949	protein_coding	Slc12a7	exon	ENSMUSG00000017756	ProperStrand	80	chr1	88252876	88252901	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	4	-18.2673
chr6	120382220	120382237	protein_coding	Kdm5a	exon	ENSMUSG00000030180	ProperStrand	57	chr4	131865855	131865930	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.8480
chr10	82113849	82113866	protein_coding	Glt8d2	utr3	ENSMUSG00000020251	NonProperStrand	24	chr1	185898794	185898843	protein_coding	Dusp10	utr3	ENSMUSG00000039384	ProperStrand	4	1	-inf
chr15	58721019	58721049	protein_coding	Rnf139	exon	ENSMUSG00000037075	ProperStrand	5	chr12	17553062	17553087	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-10.1945
chr8	109079445	109079520	protein_coding	Cdh3	utr3	ENSMUSG00000061048	ProperStrand	62	chr1	162965531	162965591	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-8.1244
chr1	102076755	102076793	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	chr1	78659848	78660993	protein_coding	Utp14b	utr5	ENSMUSG00000079470	ProperStrand	8	1	-13.5702
chr10	127525399	127525415	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr2	130103799	130103824	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-3.9375
chr9	35029136	35029182	protein_coding	Fam118b	exon	ENSMUSG00000050471	ProperStrand	3	chr7	29136613	29136656	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-inf
chr14	47931903	47931993	protein_coding	Mapk1ip1l	intron	ENSMUSG00000021840	ProperStrand	34	chr13	96100554	96100634	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	1	-9.2098
chr18	75819987	75820004	protein_coding	Ctif	intron	ENSMUSG00000052928	ProperStrand	41	chr5	34064984	34065001	protein_coding	Fgfr3	utr5	ENSMUSG00000054252	ProperStrand	13	1	-17.2508
chr4	83110894	83110994	protein_coding	Psip1	exon	ENSMUSG00000028484	ProperStrand	104	chr8	73419713	73419785	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.1792
chr3	152064670	152064711	protein_coding	Zzz3	intron	ENSMUSG00000039068	ProperStrand	26	chr16	23110533	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.9778
chr16	8940797	8940887	LINE	Lx2B	L1	chr16Lx2B8940632	NonProperStrand	1	chr16	8940318	8940408	LTR	LTR48B	ERV1	chr16LTR48B8940284	ProperStrand	1	1	-inf
chr11	5604208	5604224	protein_coding	Mrps24	utr3	ENSMUSG00000020477	ProperStrand	18	chr4	108278918	108278934	protein_coding	Orc1	exon	ENSMUSG00000028587	ProperStrand	161	1	-13.7788
chr7	19842854	19842944	protein_coding	Vasp	utr3	ENSMUSG00000030403	ProperStrand	28	chr16	23111392	23111472	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.4504
chr8	13416897	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr9	106786757	106786857	protein_coding	Rbm15b	exon	ENSMUSG00000045365	ProperStrand	17	1	-8.9928
chr1	177823897	177823914	protein_coding	Exo1	exon	ENSMUSG00000039748	ProperStrand	27	chr16	23110986	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.1875
chr7	20282240	20282301	protein_coding	Apoe	exon	ENSMUSG00000002985	ProperStrand	231	chr6	24684480	24684497	protein_coding	Hyal6	exon	ENSMUSG00000029679	NonProperStrand	114	1	-9.3228
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	92875347	92875364	protein_coding	Scarb2	exon	ENSMUSG00000029426	ProperStrand	30	1	-5.8128
chr7	151765212	151765228	antisense	Gm10574	.	ENSMUSG00000073778	ProperStrand	357	chr6	112330937	112330958	protein_coding	D630042P16Rik	intron	ENSMUSG00000034387	ProperStrand	1	1	-inf
chr11	98294810	98295287	protein_coding	Erbb2	exon	ENSMUSG00000062312	ProperStrand	24	chr17	35089181	35089228	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-7.3058
chr2	79132657	79132674	protein_coding-noncoding	Itga4	utr5	ENSMUSG00000027009	NonProperStrand	118	chr9	107134114	107134131	protein_coding	Dock3	utr5	ENSMUSG00000039716	ProperStrand	24	1	-13.8088
chr11	61566427	61568940	protein_coding	Prpsap2	exon	ENSMUSG00000020528	ProperStrand	18	chr3	123210854	123210933	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-10.4024
chr13	112277810	112280079	protein_coding	Gpbp1	utr5	ENSMUSG00000032745	ProperStrand	85	chr7	116664794	116664913	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-3.5687
chr6	54592331	54592408	protein_coding	Plekha8	utr3	ENSMUSG00000005225	ProperStrand	21	chr8	72862317	72862336	protein_coding	Upf1	exon	ENSMUSG00000058301	ProperStrand	90	2	-22.9565
chr13	35965086	35965103	protein_coding	Cdyl	utr3	ENSMUSG00000059288	ProperStrand	18	chr16	23111392	23111492	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.2408
chr17	28913286	28913451	protein_coding	Mapk13	exon	ENSMUSG00000004864	ProperStrand	4	chr4	131908356	131908417	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-11.0940
chr17	35379622	35379667	protein_coding	Ddx39b	utr5	ENSMUSG00000019432	ProperStrand	119	chr7	117190023	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.1417
chr5	16978620	16978710	LTR	ORR1A1	MaLR	chr5ORR1A116978477	NonProperStrand	1	chr5	16978827	16978917	LTR	RLTR19	ERVK	chr5RLTR1916978814	NonProperStrand	1	1	-inf
chr19	42225881	42225897	protein_coding	Marveld1	utr3	ENSMUSG00000044345	NonProperStrand	112	chr15	82980190	82980225	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-5.9065
chr2	91779941	91780127	protein_coding	Dgkz	exon	ENSMUSG00000040479	ProperStrand	46	chr4	131908361	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-3.3401
chr3	85944540	85944608	snoRNA	ENSMUSG00000064390_Rnu73b	.	ENSMUSG00000064390	ProperStrand	164	chr5	130300461	130300550	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-0.9932
chr6	119902719	119902808	protein_coding	Wnk1	exon	ENSMUSG00000045962	ProperStrand	221	chr5	31190509	31190545	tRNA	tRNA109-TyrGTA	.	219379	ProperStrand	64	1	-10.5688
chr7	88381266	88381356	protein_coding	Pde8a	intron	ENSMUSG00000025584	NonProperStrand	5	chr7	88302068	88302148	protein_coding	Slc28a1	intron	ENSMUSG00000025726	NonProperStrand	3	1	-inf
chr1	141319671	141319687	protein_coding	Zbtb41	utr5	ENSMUSG00000033964	NonProperStrand	145	chr19	8798740	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-3.1516
chr11	69730942	69731120	protein_coding	Eif5a	exon	ENSMUSG00000078812	ProperStrand	164	chr16	23111777	23111835	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	9	-10.7401
chr1	9874547	9874563	protein_coding	Sgk3	exon	ENSMUSG00000025915	NonProperStrand	2	chr11	72303309	72303325	protein_coding	Spns2	utr5	ENSMUSG00000040447	NonProperStrand	7	1	-inf
chrX	99381827	99381866	protein_coding	Rps4x	exon	ENSMUSG00000031320	ProperStrand	139	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	3	-8.9208
chr16	11144301	11144403	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr1	162967513	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	NonProperStrand	5	1	-15.6214
chr9	48013215	48013232	LINE	L1M2	L1	chr9L1M248012984	NonProperStrand	34	chr17	38290747	38290764	LTR	MurERV4-int	ERVK	chr17MurERV4-int38290059	ProperStrand	21	1	-16.5438
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	162966213	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	4	-1.8339
chr9	48800941	48800965	protein_coding	Usp28	intron	ENSMUSG00000032267	ProperStrand	63	chr8	73419683	73419760	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.0427
chr5	74489203	74489330	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr1	63225652	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	4	-2.2576
chr17	35379622	35379697	protein_coding	Ddx39b	utr5	ENSMUSG00000019432	ProperStrand	119	chr9	32068016	32068106	protein_coding	Arhgap32	exon	ENSMUSG00000041444	ProperStrand	37	1	-12.9144
chr11	87541601	87542970	protein_coding	Rnf43	exon	ENSMUSG00000034177	ProperStrand	7	chr4	131865867	131865918	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.7768
chr11	3576654	3576670	protein_coding	Morc2a	exon	ENSMUSG00000034543	ProperStrand	62	chr17	71990923	71991002	snoRNA	ENSMUSG00000092713_CT010429.1	.	ENSMUSG00000092713	ProperStrand	182	2	-17.3270
chr4	49662716	49662921	protein_coding	Rnf20	exon	ENSMUSG00000028309	ProperStrand	58	chr2	158182208	158182288	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	7	-inf
chr4	117904182	117904273	protein_coding	Ptprf	exon	ENSMUSG00000033295	ProperStrand	337	chr15	79797750	79797768	protein_coding	Cbx7	intron	ENSMUSG00000053411	ProperStrand	62	1	-9.7898
chr11	120817160	120818076	protein_coding	Slc16a3	exon	ENSMUSG00000025161	ProperStrand	98	chr16	23110529	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	8	-15.9060
chr14	119693352	119693368	protein_coding	Hs6st3	intron	ENSMUSG00000053465	NonProperStrand	134	chr4	131865399	131865458	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-2.5507
chr4	43505656	43505847	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr5	54389948	54389967	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	10	-16.6566
chr1	5903794	5903810	protein_coding	Npbwr1	utr3	ENSMUSG00000033774	ProperStrand	2	chr10	90581155	90581217	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-12.1998
chr15	79913295	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr3	51646594	51646611	protein_coding	Maml3	intron	ENSMUSG00000061143	ProperStrand	15	1	-6.2900
chr8	129468746	129468861	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	chr12	110887828	110887895	snoRNA	ENSMUSG00000084549_SNORD113	.	ENSMUSG00000084549	ProperStrand	196	2	-4.0467
chr12	32003184	32003274	protein_coding	Lamb1	exon	ENSMUSG00000002900	ProperStrand	87	chr12	70259721	70260037	protein_coding	Rps29	exon	ENSMUSG00000034892	ProperStrand	124	1	-11.1086
mmu-miR-6238	3	20	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr15	72932530	72932630	protein_coding	Eif2c2	utr3	ENSMUSG00000036698	ProperStrand	154	1	-8.6459
chr18	56867636	56867742	protein_coding	Lmnb1	utr5	ENSMUSG00000024590	ProperStrand	176	chr5	64301840	64301856	protein_coding	Rell1	utr3	ENSMUSG00000047881	NonProperStrand	4	1	-16.8368
chr8	95505794	95505811	protein_coding	Slc6a2	intron	ENSMUSG00000055368	NonProperStrand	21	chrX	34622906	34622990	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-5.1646
chr11	30289791	30289850	LINE	L1_Mus3	L1	chr11L1_Mus330286150	NonProperStrand	1	chr5	130300437	130300527	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-inf
chr15	102493408	102493465	protein_coding	Atp5g2	utr3	ENSMUSG00000062683	ProperStrand	32	chr13	21261553	21261587	tRNA	tRNA999-MetCAT	.	376472	ProperStrand	63	1	-14.4865
chr6	52521610	52521690	protein_coding	Hibadh	intron	ENSMUSG00000029776	ProperStrand	33	chr2	158184119	158184209	snoRNA	ENSMUSG00000064995_SNORA71	.	ENSMUSG00000064995	ProperStrand	430	1	-10.5750
chr1	181027187	181027205	protein_coding	Smyd3	intron	ENSMUSG00000055067	ProperStrand	231	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-1.3462
chr1	51854340	51856438	protein_coding	Myo1b	exon	ENSMUSG00000018417	ProperStrand	31	chr17	13112551	13112583	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	2	-9.5845
chr19	5799728	5799776	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr3	87972518	87972537	protein_coding	Mef2d	utr3	ENSMUSG00000001419	ProperStrand	15	2	-16.4094
chr17	51059907	51059923	protein_coding	Tbc1d5	exon	ENSMUSG00000023923	NonProperStrand	51	chr17	35089181	35089230	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-5.8038
chr4	29315594	29315684	DNA	MER2	MER2_type	chr4MER229315387	NonProperStrand	1	chr4	29316216	29316296	SINE	B1F2	Alu	chr4B1F229316172	ProperStrand	1	1	-inf
chr1	132639189	132639207	protein_coding	AA986860	exon	ENSMUSG00000042510	ProperStrand	15	chr9	15130748	15130781	snoRNA	ENSMUSG00000077506_Scarna9	.	ENSMUSG00000077506	ProperStrand	148	1	-14.3222
chr4	78670707	78670797	LINE	L1_Mur3	L1	chr4L1_Mur378668300	ProperStrand	1	chr4	65875110	65875190	protein_coding	Astn2	intron	ENSMUSG00000028373	NonProperStrand	10	1	-inf
chr9	114526932	114526989	protein_coding	Cnot10	exon	ENSMUSG00000056167	ProperStrand	16	chr11	97642981	97643071	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.9320
chr9	45203698	45203731	protein_coding	Fxyd6	utr3	ENSMUSG00000066705	ProperStrand	30	chr19	39917317	39917333	protein_coding	Cyp2c69	utr3	ENSMUSG00000092008	NonProperStrand	83	1	-14.0598
chr13	23714005	23714041	protein_coding	Hist1h1e	exon	ENSMUSG00000051627	ProperStrand	41	chr12	55797772	55797862	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	1	-8.4604
chr7	28145525	28145544	protein_coding	Spnb4	intron	ENSMUSG00000011751	ProperStrand	39	chr17	13112450	13112511	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-5.4155
chr11	109227012	109227051	protein_coding	Gna13	exon	ENSMUSG00000020611	ProperStrand	23	chr2	26493386	26493449	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-5.5917
chr9	59526637	59526709	protein_coding	Pkm2	utr3	ENSMUSG00000032294	ProperStrand	1296	chrX	84483695	84483713	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-2.3991
chr16	91785592	91793863	protein_coding	Itsn1	exon	ENSMUSG00000022957	ProperStrand	172	chr14	33974945	33974965	protein_coding	Wdfy4	intron	ENSMUSG00000051506	NonProperStrand	11	1	-14.6602
chr8	86429893	86429983	protein_coding	Lphn1	intron	ENSMUSG00000013033	ProperStrand	221	chr19	8800358	8800438	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	4	-5.7294
chr13	22134741	22134831	protein_coding	Hist1h2ag	utr5	ENSMUSG00000069301	ProperStrand	2	chr19	8799581	8799610	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-14.2184
chr16	17406438	17406455	protein_coding	Snap29	exon	ENSMUSG00000022765	ProperStrand	2	chr13	77663362	77663380	protein_coding	2210408I21Rik	intron	ENSMUSG00000071252	NonProperStrand	8	1	-19.9311
chr11	6428076	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr11	51551278	51551373	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	8	-2.4091
chr3	87924178	87924214	protein_coding	Iqgap3	utr3	ENSMUSG00000028068	ProperStrand	16	chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	1	-12.5183
chr17	35089181	35089203	processed_transcript	1110038B12Rik	.	ENSMUSG00000092203	ProperStrand	126	chr1	162965530	162965586	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-3.6102
chr19	5797202	5797221	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr8	113366298	113366353	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	1	-3.5504
chr11	120816731	120816779	protein_coding	Slc16a3	exon	ENSMUSG00000025161	ProperStrand	98	chr10	83989627	83989643	protein_coding	Ckap4	utr3	ENSMUSG00000046841	ProperStrand	60	1	-12.3284
chr16	34705283	34705337	protein_coding	Ccdc14	exon	ENSMUSG00000022833	ProperStrand	22	chr18	35714262	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-5.3631
chr14	56481919	56481942	protein_coding	Nynrin	exon	ENSMUSG00000075592	ProperStrand	76	chr9	15119349	15119425	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	3	-11.0737
chr5	124999664	124999704	protein_coding	Tmed2	utr3	ENSMUSG00000029390	ProperStrand	15	chr2	158182156	158182256	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	4	-21.0559
chr5	121654997	121655097	protein_coding	Rpl6	intron	ENSMUSG00000029614	ProperStrand	332	chr4	41158542	41158575	snoRNA	ENSMUSG00000089308_SNORD121A	.	ENSMUSG00000089308	ProperStrand	209	1	-7.3943
chr18	35775867	35775967	protein_coding	Paip2	utr3	ENSMUSG00000037058	ProperStrand	15	chr1	162966002	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-6.3018
chr12	110887830	110887861	snoRNA	ENSMUSG00000084549_SNORD113	.	ENSMUSG00000084549	ProperStrand	196	chr17	35089180	35089238	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-3.2466
chr2	79843543	79843559	protein_coding	Pde1a	intron	ENSMUSG00000059173	NonProperStrand	275	chr11	62416601	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-2.3681
chr1	71001219	71001299	LTR	MTA_Mm	MaLR	chr1MTA_Mm71000964	ProperStrand	1	chr15	47752490	47752580	protein_coding	Csmd3	intron	ENSMUSG00000022311	NonProperStrand	25	1	-inf
chr19	4623212	4623532	protein_coding	Rce1	exon	ENSMUSG00000024889	ProperStrand	11	chr11	69483136	69483187	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-9.3712
chr5	143197624	143197724	protein_coding	Slc29a4	utr3	ENSMUSG00000050822	ProperStrand	14	chr5	130300509	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-5.2410
chr3	4339095	4339118	rRNA	n-R5s194	.	ENSMUSG00000077912	ProperStrand	24	chr11	69483135	69483216	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.1173
chr9	54805605	54805670	protein_coding	Psma4	utr3	ENSMUSG00000032301	ProperStrand	14	chr18	35716788	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-8.1072
chr7	24779190	24779213	SINE	ID_B1	B4	chr7ID_B124779183	NonProperStrand	54	chr1	53409486	53409502	protein_coding	Asnsd1	utr5	ENSMUSG00000026095	NonProperStrand	105	1	-12.4018
chr12	3968611	3968627	protein_coding	Efr3b	exon	ENSMUSG00000020658	ProperStrand	142	chr2	180759354	180759427	protein_coding	Chrna4	utr3	ENSMUSG00000027577	ProperStrand	2	1	-inf
chr14	63287576	63287611	snoRNA	ENSMUSG00000089531_SNORA73	.	ENSMUSG00000089531	ProperStrand	123	chr17	35089181	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	4	-13.2212
chr1	43171705	43171740	protein_coding	AI597479	utr3	ENSMUSG00000010290	ProperStrand	36	chr17	35087895	35087936	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-6.2041
chr11	32635307	32635325	protein_coding	Fbxw11	exon	ENSMUSG00000020271	NonProperStrand	31	chr9	120039585	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-4.5608
chr5	27676304	27676321	protein_coding	Dpp6	intron	ENSMUSG00000061576	ProperStrand	35	chr3	96067087	96067170	protein_coding	Hist2h4	exon	ENSMUSG00000091405	ProperStrand	18	1	-16.8098
chr14	80262505	80262522	lincRNA	Gm6999	intron	ENSMUSG00000075495	ProperStrand	265	chr6	29420384	29420466	protein_coding	Atp6v1f	utr3	ENSMUSG00000004285	ProperStrand	9	1	-14.2256
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr9	120039533	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	14	-1.3521
chr19	44188366	44188396	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr1	31000135	31000785	protein_coding	Ptp4a1	exon	ENSMUSG00000026064	ProperStrand	26	1	-9.4790
chr11	96133152	96133171	protein_coding	Hoxb9	exon	ENSMUSG00000020875	NonProperStrand	22	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-5.5331
chr5	121160501	121160518	protein_coding	Dtx1	utr5	ENSMUSG00000029603	NonProperStrand	33	chr3	96132451	96132514	snRNA	ENSMUSG00000075978_U1	.	ENSMUSG00000075978	ProperStrand	132	1	-12.9380
chr11	78150285	78150301	protein_coding	Pigs	exon	ENSMUSG00000041958	NonProperStrand	138	chr5	108336363	108336409	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-3.3159
chr10	84493460	84493550	LTR	RMER15	ERVL	chr10RMER1584493423	ProperStrand	1	chr2	131744630	131744710	protein_coding	Prnd	intron	ENSMUSG00000027338	NonProperStrand	12	1	-inf
chr19	32570185	32589313	protein_coding	Minpp1	utr3	ENSMUSG00000024896	ProperStrand	23	chr3	123210854	123210938	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-9.3808
chr18	35989484	35989500	protein_coding	Cxxc5	utr5	ENSMUSG00000046668	ProperStrand	30	chr17	13184995	13185013	protein_coding	Wtap	utr5	ENSMUSG00000060475	ProperStrand	119	1	-13.3405
chr13	55755831	55755847	protein_coding	Ddx46	intron	ENSMUSG00000021500	ProperStrand	87	chr7	52713350	52713451	protein_coding	Ftl1	utr3	ENSMUSG00000050708	ProperStrand	807	1	-7.3758
chr7	52714023	52714511	protein_coding	Ftl1	exon	ENSMUSG00000050708	ProperStrand	807	chr12	55797768	55797858	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	1	-2.7335
chr15	37313435	37313452	protein_coding	Ncald	intron	ENSMUSG00000051359	ProperStrand	28	chr8	73419724	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.5584
chr3	103690208	103690225	protein_coding	Ptpn22	exon	ENSMUSG00000027843	ProperStrand	14	chrX	84483701	84483730	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-11.2053
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr7	116664794	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	5	-1.4476
chr4	116300029	116300076	protein_coding	Nasp	utr5	ENSMUSG00000028693	NonProperStrand	5	chr8	98269959	98270047	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	3	-18.9929
mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr13	41279154	41279170	protein_coding	Elovl2	utr3	ENSMUSG00000021364	NonProperStrand	7	1	-10.2930
chr19	23332023	23332040	protein_coding	Smc5	exon	ENSMUSG00000024943	ProperStrand	146	chr8	122129036	122129052	protein_coding	Taf1c	utr5	ENSMUSG00000031832	ProperStrand	26	1	-13.2224
chr7	20310063	20310153	protein_coding	Pvrl2	exon	ENSMUSG00000062300	ProperStrand	110	chr11	69483149	69483229	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-2.7872
chr9	78023108	78023159	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr1	182530618	182530709	protein_coding	Parp1	utr3	ENSMUSG00000026496	ProperStrand	227	5	-14.2622
chr2	180969467	180969557	protein_coding	BC006779	exon	ENSMUSG00000027580	ProperStrand	42	chr5	108334196	108334276	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-5.5141
chr4	134026605	134026623	protein_coding	Stmn1	exon	ENSMUSG00000028832	ProperStrand	54	chr11	69483176	69483266	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.6309
chr15	75356417	75356507	LINE	L1Md_T	L1	chr15L1Md_T75354062	ProperStrand	3	chr18	33954819	33954899	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-16.2585
chr8	125305475	125316567	protein_coding	Acsf3	intron	ENSMUSG00000015016	ProperStrand	12	chr16	23110855	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-12.5411
chr4	136098226	136098244	protein_coding	Luzp1	exon	ENSMUSG00000001089	ProperStrand	35	chr7	150429747	150429763	protein_coding	Kcnq1	intron	ENSMUSG00000009545	NonProperStrand	133	1	-12.8039
chr12	80867180	80867202	protein_coding	Rad51l1	intron	ENSMUSG00000059060	ProperStrand	26	chr16	23111383	23111455	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.5788
chr5	116174721	116174738	protein_coding	Ccdc64	exon	ENSMUSG00000041609	ProperStrand	51	chr7	28061791	28061809	protein_coding	Numbl	exon	ENSMUSG00000063160	NonProperStrand	9	1	-17.5457
chr13	10631270	10631289	lincRNA	Gm16950	intron	ENSMUSG00000086178	ProperStrand	8	chr14	33005038	33005072	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-8.0215
chr9	105803981	105806835	protein_coding	Col6a5	exon	ENSMUSG00000091345	ProperStrand	8	chr10	23505167	23505247	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.7871
chr13	113264591	113264669	LTR	LTR40b	ERVL	chr13LTR40b113264500	ProperStrand	3	chr8	73419657	73419729	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-inf
chr1	88253695	88253775	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chrX	12675120	12675210	protein_coding	Usp9x	intron	ENSMUSG00000031010	ProperStrand	174	1	-5.2625
chr8	71349489	71349589	protein_coding	Ints10	intron	ENSMUSG00000031864	ProperStrand	28	chr1	162967533	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.9223
chr11	88063877	88063893	LINE	L2a	L2	chr11L2a88063784	ProperStrand	2	chr4	116827165	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-14.4927
chr15	99287889	99287979	protein_coding	Nckap5l	intron	ENSMUSG00000023009	ProperStrand	51	chr7	116664797	116664894	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	13	-inf
chr7	20282258	20282301	protein_coding	Apoe	exon	ENSMUSG00000002985	ProperStrand	231	chr8	113366288	113366332	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	1	-6.4983
chr7	24713726	24713742	protein_coding	Vmn1r179	exon	ENSMUSG00000046924	NonProperStrand	69	chr1	162965980	162965999	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-3.3465
chr14	68203212	68203228	LINE	L1M4c	L1	chr14L1M4c68203191	ProperStrand	4	chr15	102047882	102048225	protein_coding	Itgb7	exon	ENSMUSG00000001281	ProperStrand	10	1	-19.3291
chr18	44555634	44555651	protein_coding	Dcp2	exon	ENSMUSG00000024472	ProperStrand	44	chr17	39985662	39985762	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-6.5453
chr11	6520321	6520390	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	chr9	64022854	64022914	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-2.6713
chr13	58493667	58496610	protein_coding	Hnrnpk	utr3	ENSMUSG00000021546	ProperStrand	117	chr4	131865855	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	9	-12.9853
chr9	78326456	78335499	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr16	23111373	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	39	-1.5402
chr9	120038467	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	chr1	88252835	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	15	-3.1075
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr18	74129869	74129886	protein_coding	Mapk4	exon	ENSMUSG00000024558	ProperStrand	34	1	-8.9357
chr4	46482779	46482842	protein_coding	Anp32b	exon	ENSMUSG00000028333	ProperStrand	229	chr4	131865934	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-1.1497
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr18	63908609	63908625	protein_coding	Wdr7	intron	ENSMUSG00000040560	NonProperStrand	180	1	-6.5317
chr2	3408983	3411779	protein_coding	Hspa14	exon	ENSMUSG00000051396	ProperStrand	23	chr1	172975116	172975189	tRNA	tRNA699-GlyGCC	.	831563	ProperStrand	660	3	-inf
chr14	76245463	76245495	protein_coding	Tpt1	exon	ENSMUSG00000060126	ProperStrand	236	chr1	162966190	162966256	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	2	-8.0597
chr12	81269133	81269200	protein_coding	Actn1	utr3	ENSMUSG00000015143	ProperStrand	128	chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	1	-8.5572
chr10	72557598	72557678	LINE	L1MA6	L1	chr10L1MA672557607	ProperStrand	1	chr10	72557416	72557506	Simple_repeat	(CATA)n	Simple_repeat	chr10(CATA)n72557433	NonProperStrand	1	1	-inf
chr13	51743567	51743692	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	chr2	26493366	26493485	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	8	-1.8749
chr12	117828762	117828780	protein_coding	Ptprn2	intron	ENSMUSG00000056553	NonProperStrand	38	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.5179
chr10	127428422	127428438	protein_coding	Hsd17b6	exon	ENSMUSG00000025396	NonProperStrand	68	chr15	79908931	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-5.2287
chr12	86684327	86684419	protein_coding	Tmed10	utr3	ENSMUSG00000021248	ProperStrand	34	chr2	48760556	48760572	protein_coding	Orc4	utr3	ENSMUSG00000026761	ProperStrand	95	1	-13.5347
chr19	3897563	3897595	protein_coding	Tcirg1	exon	ENSMUSG00000001750	ProperStrand	77	chr18	35716811	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.7704
chr17	6987005	6987027	protein_coding	Ezr	utr5	ENSMUSG00000052397	ProperStrand	126	chr2	26494708	26494829	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.8501
chr6	122838483	122838515	protein_coding	Necap1	utr3	ENSMUSG00000030327	ProperStrand	12	chr7	52382275	52382314	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-11.5601
chr3	30943562	30943591	protein_coding	Prkci	intron	ENSMUSG00000037643	ProperStrand	39	chr4	131865901	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-6.5889
chr15	36140700	36140718	protein_coding	Spag1	intron	ENSMUSG00000037617	ProperStrand	11	chr15	79908957	79909019	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-8.8923
chr8	127948693	127948788	protein_coding	Sipa1l2	intron	ENSMUSG00000001995	ProperStrand	37	chr5	9479231	9479248	protein_coding	9330182L06Rik	exon	ENSMUSG00000056004	NonProperStrand	3	1	-21.0941
chr5	109063677	109063694	protein_coding	Tmem175	intron	ENSMUSG00000013495	ProperStrand	31	chr14	33005074	33005139	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-5.2644
chr9	65127126	65127142	protein_coding	Cilp	exon	ENSMUSG00000042254	ProperStrand	212	chr7	117189864	117189893	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-3.7817
chr2	26203131	26203147	protein_coding	Gpsm1	utr3	ENSMUSG00000026930	ProperStrand	93	chr10	23505037	23505383	protein_coding	Rps12	exon	ENSMUSG00000061983	ProperStrand	309	1	-9.1498
chr2	91435854	91435927	protein_coding	Ckap5	exon	ENSMUSG00000040549	ProperStrand	53	chr1	162967141	162967178	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	1	-8.9284
chr17	95160908	95218242	protein_coding	2610044O15Rik	exon	ENSMUSG00000066057	NonProperStrand	70	chr2	34646110	34646166	protein_coding	Rabepk	exon	ENSMUSG00000070953	ProperStrand	5	1	-18.0731
chr7	118219142	118219193	protein_coding	Eif4g2	exon	ENSMUSG00000005610	ProperStrand	134	chr16	23111464	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-0.8710
chr15	98604924	98606960	protein_coding	Wnt10b	exon	ENSMUSG00000022996	NonProperStrand	189	chr11	62418013	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-3.3796
chr11	115915764	115916198	protein_coding	Unk	exon	ENSMUSG00000020770	ProperStrand	21	chr10	61731971	61732005	protein_coding	Hk1	utr3	ENSMUSG00000037012	ProperStrand	84	1	-14.7770
chr3	87972439	87972518	protein_coding	Mef2d	utr3	ENSMUSG00000001419	ProperStrand	15	chr5	108333645	108333665	snoRNA	ENSMUSG00000064453_Snord21	.	ENSMUSG00000064453	ProperStrand	201	3	-inf
chr9	66026110	66026131	protein_coding	Dapk2	intron	ENSMUSG00000032380	NonProperStrand	5	chr16	23110827	23110853	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr10	39975690	39975759	protein_coding	Gtf3c6	intron	ENSMUSG00000019837	ProperStrand	4	chr11	62416956	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-11.6858
chr16	4119733	4119749	protein_coding	Crebbp	exon	ENSMUSG00000022521	NonProperStrand	5	chr15	5068408	5068479	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-11.2001
chr6	52589295	52589364	protein_coding	Hibadh	intron	ENSMUSG00000029776	ProperStrand	33	chr1	9932548	9932620	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-8.9300
chr3	126185160	126185240	LINE	Lx6	L1	chr3Lx6126184728	ProperStrand	1	chr5	87139584	87139674	protein_coding	Tmprss11e	intron	ENSMUSG00000054537	NonProperStrand	2	1	-inf
chr11	62416583	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	chr9	64024930	64024998	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	2	-2.7777
chr19	4286796	4286886	protein_coding	Adrbk1	utr3	ENSMUSG00000024858	ProperStrand	37	chr7	117189980	117190060	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.2355
chr7	52378298	52378317	protein_coding	Rps11	exon	ENSMUSG00000003429	ProperStrand	49	chr1	162967505	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-6.5031
chr7	134236028	134236108	protein_coding	AI467606	exon	ENSMUSG00000045165	NonProperStrand	1	chr18	35714186	35714277	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	NonProperStrand	47	1	-inf
chr9	15119967	15120038	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	chr8	113366285	113366325	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	4	-11.0353
chr18	9371265	9371288	protein_coding	Ccny	intron	ENSMUSG00000024286	ProperStrand	23	chr15	98350184	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-6.6496
chr1	153241900	153244351	protein_coding	1200016B10Rik	exon	ENSMUSG00000052748	ProperStrand	16	chr16	23110828	23110906	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-5.6614
chr7	148389270	148389319	protein_coding	Lrrc56	intron	ENSMUSG00000038637	ProperStrand	1	chr11	97642952	97642998	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-inf
chr2	121949510	121949527	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	chr17	6232006	6232022	protein_coding	Tulp4	exon	ENSMUSG00000034377	NonProperStrand	265	1	-7.3333
chr9	62695420	62695441	protein_coding	Cln6	exon	ENSMUSG00000032245	ProperStrand	34	chr7	118219575	118219623	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-5.2657
chr10	42847633	42847711	protein_coding	Sobp	exon	ENSMUSG00000038248	ProperStrand	15	chrX	34622929	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	5	-inf
chr11	95151175	95152840	protein_coding	Myst2	exon	ENSMUSG00000038909	NonProperStrand	2	chr4	131908810	131908871	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-8.0336
chr11	48614370	48614435	snoRNA	ENSMUSG00000064500_SNORD95	.	ENSMUSG00000064500	ProperStrand	100	chr19	8798516	8798553	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-4.2310
chr5	54509841	54509857	protein_coding	Stim2	exon	ENSMUSG00000039156	NonProperStrand	22	chr16	90386836	90386853	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	1	-14.2503
chr14	32515389	32515405	protein_coding	Ankrd28	exon	ENSMUSG00000014496	ProperStrand	39	chrX	135510687	135510704	protein_coding	Nrk	exon	ENSMUSG00000052854	ProperStrand	24	1	-15.9975
chr7	17502047	17502147	protein_coding	Calm3	utr3	ENSMUSG00000019370	ProperStrand	28	chr16	23110912	23110964	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.1386
chr10	76543491	76559167	protein_coding	Col18a1	exon	ENSMUSG00000001435	ProperStrand	287	chr7	29136598	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-0.8061
chr8	87358243	87358309	protein_coding	Gadd45gip1	exon	ENSMUSG00000033751	ProperStrand	45	chr18	35716684	35716774	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.6579
chr15	75356417	75356507	LINE	L1Md_T	L1	chr15L1Md_T75354062	ProperStrand	3	chr5	74489596	74489676	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-10.0122
chr17	24665379	24665431	antisense	2610019E17Rik	.	ENSMUSG00000093565	ProperStrand	24	chr19	8799871	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	2	-10.9383
chr10	23506278	23506347	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	2	-0.6974
chr9	108110502	108110552	protein_coding	Dag1	exon	ENSMUSG00000039952	ProperStrand	54	chr9	15118325	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	3	-9.0587
chr1	10025040	10025056	protein_coding	Cops5	exon	ENSMUSG00000025917	ProperStrand	11	chr15	79908929	79908986	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-8.8923
chr2	46602522	46602541	LINE	Lx3A	L1	chr2Lx3A46598912	NonProperStrand	2	chr16	23111691	23111753	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-inf
chr9	123065930	123065946	protein_coding	Clec3b	exon	ENSMUSG00000025784	ProperStrand	58	chr5	151755616	151755632	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-7.8073
chrX	103075293	103079681	protein_coding	Atrx	exon	ENSMUSG00000031229	ProperStrand	54	chr16	23111453	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.4069
chr14	8997024	8997071	protein_coding	Pxk	utr3	ENSMUSG00000033885	ProperStrand	5	chr17	24857768	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-7.1522
chr6	83111671	83111687	protein_coding	1700003E16Rik	exon	ENSMUSG00000030030	ProperStrand	352	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-6.9008
chr11	102294588	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr2	26494708	26494840	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	5	-2.4198
chr5	89062955	89063029	protein_coding	Rufy3	intron	ENSMUSG00000029291	NonProperStrand	5	chr16	23110832	23110871	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr7	52159395	52159469	protein_coding	Ap2a1	exon	ENSMUSG00000060279	ProperStrand	193	chr4	131908357	131908409	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-1.6742
chr17	35822057	35822256	protein_coding	Ddr1	exon	ENSMUSG00000003534	ProperStrand	129	chr8	98269962	98270082	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	3	-9.8621
chr11	115940590	115940680	protein_coding	Wbp2	utr3	ENSMUSG00000034341	ProperStrand	39	chrX	34622957	34623037	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-3.9678
chr6	117874274	117874374	protein_coding	Hnrnpf	exon	ENSMUSG00000042079	ProperStrand	147	chr7	117190037	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-1.8046
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr2	53003875	53003891	protein_coding	Prpf40a	exon	ENSMUSG00000061136	ProperStrand	129	1	-7.3993
chr2	146069016	146069033	protein_coding	Ralgapa2	utr3	ENSMUSG00000037110	ProperStrand	35	chr3	123210854	123210894	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-5.1939
chr7	150757496	150760474	protein_coding	Cars	exon	ENSMUSG00000010755	ProperStrand	62	chr5	108334221	108334311	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	2	-7.8775
chr2	129998665	129998715	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr9	64143736	64143789	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-2.7929
chr5	120128839	120130486	protein_coding	Tbx3	exon	ENSMUSG00000018604	ProperStrand	87	chr10	23505152	23505203	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-2.6432
chr18	85128517	85128578	protein_coding	Fbxo15	exon	ENSMUSG00000034391	ProperStrand	23	chr6	121423179	121423195	protein_coding	Iqsec3	utr5	ENSMUSG00000040797	NonProperStrand	139	1	-13.5658
chr11	68596799	68596972	protein_coding	Myh10	exon	ENSMUSG00000020900	ProperStrand	91	chr5	130300471	130300551	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.8256
chr11	115451723	115451739	protein_coding	Gga3	exon	ENSMUSG00000020740	NonProperStrand	50	chr14	76247711	76247768	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-4.5194
chr6	124760942	124760959	protein_coding	Tpi1	utr3	ENSMUSG00000023456	ProperStrand	94	chr3	68889026	68889147	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-2.4658
chr14	51427119	51427209	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr10	56108423	56108503	protein_coding	Gja1	exon	ENSMUSG00000050953	ProperStrand	70	1	-6.9029
chr11	106645742	106647423	protein_coding	Ddx5	exon	ENSMUSG00000020719	ProperStrand	181	chr4	131908300	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-1.1527
chr8	24522256	24522344	protein_coding	Sfrp1	exon	ENSMUSG00000031548	ProperStrand	22	chr8	74843500	74843553	protein_coding	Klf2	exon	ENSMUSG00000055148	ProperStrand	82	1	-14.7110
chrX	10296278	10296366	protein_coding	Mid1ip1	utr3	ENSMUSG00000008035	ProperStrand	27	chr5	130300499	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.9586
chr5	28138459	28138549	LINE	Lx2	L1	chr5Lx228137229	NonProperStrand	1	chr5	28138665	28138745	LINE	Lx2	L1	chr5Lx228138582	NonProperStrand	1	1	-inf
chr4	131866242	131866292	lincRNA	Snhg12	exon	ENSMUSG00000086290	ProperStrand	178	chr4	131866152	131866252	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	12	-19.5269
chr5	111082719	111082737	protein_coding	Ddx51	exon	ENSMUSG00000029504	ProperStrand	54	chr4	131866205	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-3.8616
chr6	119028204	119028225	protein_coding	Cacna1c	intron	ENSMUSG00000051331	NonProperStrand	49	chr2	130103751	130103811	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-8.8779
chr11	75578824	75578935	protein_coding	Ywhae	utr3	ENSMUSG00000020849	ProperStrand	176	chr1	182733128	182733174	protein_coding	H3f3a	utr3	ENSMUSG00000060743	ProperStrand	46	1	-11.6904
chr16	11141853	11141937	protein_coding-noncoding	Zc3h7a	utr3	ENSMUSG00000037965	ProperStrand	7	chr9	63868722	63868739	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	4	-19.8176
chr8	24222386	24222403	protein_coding	Ank1	intron	ENSMUSG00000031543	ProperStrand	47	chr10	90581244	90581270	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-5.2810
chr13	13603296	13603312	protein_coding	Nid1	utr3	ENSMUSG00000005397	ProperStrand	112	chr19	8963027	8963175	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.3124
chr4	116944518	116944562	protein_coding	Rnf220	utr3	ENSMUSG00000028677	ProperStrand	131	chr14	21509167	21509203	protein_coding	Sec24c	exon	ENSMUSG00000039367	ProperStrand	60	1	-11.7461
chr3	79223176	79223193	protein_coding	Gm17359	intron	ENSMUSG00000091685	NonProperStrand	50	chr10	110918615	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-6.4047
chr6	17237062	17237080	protein_coding	Cav2	utr3	ENSMUSG00000000058	ProperStrand	8	chr5	108334195	108334285	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	2	-14.2927
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr16	56035865	56035987	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	1	-3.5155
chr10	126617425	126617443	protein_coding	Slc26a10	exon	ENSMUSG00000040441	ProperStrand	5	chr5	112865460	112865478	protein_coding	Sez6l	exon	ENSMUSG00000058153	ProperStrand	81	1	-17.7110
chr4	132413239	132414355	protein_coding	Stx12	exon	ENSMUSG00000028879	ProperStrand	5	chr8	98269959	98270049	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-10.6614
chr11	4982361	4982411	protein_coding	Ewsr1	exon	ENSMUSG00000009079	ProperStrand	248	chr1	162967519	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	3	-3.5806
chrX	46062082	46062127	protein_coding	Rbmx2	exon	ENSMUSG00000031107	ProperStrand	7	chr16	23110941	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-6.1472
chr6	118333627	118333707	protein_coding	Bms1	utr3	ENSMUSG00000030138	ProperStrand	107	chr5	92485093	92485183	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	1	-7.5843
chr11	120265530	120265632	protein_coding	Nploc4	exon	ENSMUSG00000039703	ProperStrand	44	chr1	162965560	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.8495
chr11	84042523	84045163	protein_coding	Acaca	exon	ENSMUSG00000020532	ProperStrand	100	chr15	82980192	82980224	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-6.1289
chr5	121658415	121658437	protein_coding	Rpl6	exon	ENSMUSG00000029614	ProperStrand	332	chr8	71328853	71331388	protein_coding	Ints10	exon	ENSMUSG00000031864	ProperStrand	28	1	-11.4255
chr11	69266814	69266830	protein_coding	Dnahc2	exon	ENSMUSG00000005237	ProperStrand	95	chr19	8798501	8798553	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-4.3282
chr1	59003169	59003223	protein_coding	Trak2	utr5	ENSMUSG00000026028	ProperStrand	13	chr18	35714262	35714290	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	3	-14.9585
chr3	85944541	85944608	snoRNA	ENSMUSG00000064390_Rnu73b	.	ENSMUSG00000064390	ProperStrand	164	chr7	148634705	148634827	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-3.9211
chr13	113298051	113298151	LTR	RMER19B	ERVK	chr13RMER19B113297604	NonProperStrand	2	chr12	112779242	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-12.1663
chr9	108403720	108403750	protein_coding	Usp19	exon	ENSMUSG00000006676	ProperStrand	57	chr13	96374713	96374729	protein_coding	F2r	exon	ENSMUSG00000048376	NonProperStrand	88	1	-12.6464
chr3	129598520	129598537	protein_coding	Pla2g12a	utr3	ENSMUSG00000027999	NonProperStrand	10	chr13	46862945	46863021	snoRNA	ENSMUSG00000064558_SNORA55	.	ENSMUSG00000064558	ProperStrand	187	1	-14.7104
chr4	131865381	131865498	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	chr16	20684311	20684383	snoRNA	ENSMUSG00000077239_Snord66	.	ENSMUSG00000077239	ProperStrand	159	7	-16.1119
chr13	13603293	13603311	protein_coding	Nid1	utr3	ENSMUSG00000005397	ProperStrand	112	chr15	85960717	85960953	protein_coding	Gramd4	exon	ENSMUSG00000035900	ProperStrand	39	1	-12.9283
chr2	83693562	83693578	protein_coding	Fam171b	exon	ENSMUSG00000048388	NonProperStrand	175	chr15	79908984	79909019	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-3.4405
chr5	122907573	122908131	protein_coding	Atp2a2	exon	ENSMUSG00000029467	ProperStrand	166	chr4	116826700	116826766	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-4.7924
chr7	137905607	137905697	protein_coding	Tacc2	intron	ENSMUSG00000030852	ProperStrand	95	chr18	33954865	33954945	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-2.6821
chr10	80640916	80644729	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	2	-3.4850
chr11	119141978	119142005	protein_coding	Gaa	intron	ENSMUSG00000025579	ProperStrand	149	chr3	108322922	108322939	protein_coding	5330417C22Rik	intron	ENSMUSG00000040412	ProperStrand	3	1	-18.1098
chr11	69037669	69037685	protein_coding	Gucy2e	exon	ENSMUSG00000020890	NonProperStrand	99	chr2	26494778	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.2391
chr11	45723144	45723160	protein_coding	Clint1	utr3	ENSMUSG00000006169	NonProperStrand	273	chr11	84722945	84722961	protein_coding	Myo19	exon	ENSMUSG00000020527	ProperStrand	82	1	-9.6490
chr3	129339757	129339847	protein_coding	Elovl6	utr3	ENSMUSG00000041220	ProperStrand	59	chr7	116664819	116664899	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-6.7789
chr7	52831285	52831304	protein_coding	Bcat2	exon	ENSMUSG00000030826	ProperStrand	24	chr4	131908356	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-7.6045
chr7	114354089	114354169	protein_coding	Rbmxl2	exon	ENSMUSG00000073894	ProperStrand	23	chr9	15119675	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.3979
chr10	20080843	20080859	protein_coding	Fam54a	utr3	ENSMUSG00000019992	ProperStrand	232	chr13	21871954	21872006	protein_coding	Hist1h1b	exon	ENSMUSG00000058773	ProperStrand	65	1	-10.4405
chr12	102321358	102321441	protein_coding	Smek1	utr5	ENSMUSG00000041846	ProperStrand	66	chr7	150717336	150717426	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-5.3208
chr5	122622350	122622458	protein_coding	Ppp1cc	intron	ENSMUSG00000004455	ProperStrand	46	chr16	91729703	91729724	protein_coding	Itsn1	utr5	ENSMUSG00000022957	ProperStrand	172	3	-19.5095
chr11	60054980	60054997	antisense	Gm12265	.	ENSMUSG00000085132	ProperStrand	5	chr2	80159462	80159530	protein_coding	Dnajc10	intron	ENSMUSG00000027006	ProperStrand	36	1	-18.5702
chr5	93348753	93362820	protein_coding	Shroom3	utr5	ENSMUSG00000029381	ProperStrand	52	chr11	68886928	68887008	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-4.4160
chr4	131865855	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr13	90238586	90238719	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	15	-5.2385
chrX	70952097	70952187	protein_coding	Bcap31	intron	ENSMUSG00000002015	ProperStrand	21	chr9	15119650	15119730	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-7.6496
chr15	73587440	73587530	protein_coding	Ptp4a3	utr3	ENSMUSG00000059895	ProperStrand	45	chr17	13112491	13112572	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-5.1358
chr6	57599745	57599762	protein_coding	Herc6	intron	ENSMUSG00000029798	ProperStrand	7	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-13.0159
mmu-miR-291a-5p	0	22	miRNA	mmu-miR-291a-5p	.	mmu-miR-291a-5p	ProperStrand	8	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-5.7082
chr5	42209597	42209697	protein_coding	Bod1l	exon	ENSMUSG00000061755	ProperStrand	43	chr7	116664822	116664870	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.1373
chr3	11580450	11580467	LINE	Lx3A	L1	chr3Lx3A11580299	ProperStrand	53	chr5	111121182	111121200	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-6.6802
chr9	104054267	104054333	protein_coding	Dnajc13	utr3	ENSMUSG00000032560	ProperStrand	60	chr6	100676226	100676245	pseudogene	Gm15576	.	ENSMUSG00000084157	ProperStrand	1	1	-inf
chr7	125263171	125263262	protein_coding	Arl6ip1	utr3	ENSMUSG00000030654	ProperStrand	57	chr11	69481393	69481473	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.2937
chr2	79132657	79132674	protein_coding-noncoding	Itga4	utr5	ENSMUSG00000027009	NonProperStrand	118	chr19	8800355	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-2.3348
chr16	84370193	84370211	LINE	Lx6	L1	chr16Lx684370195	NonProperStrand	1	chr5	136204571	136205355	protein_coding	Por	exon	ENSMUSG00000005514	NonProperStrand	2	1	-inf
chrX	152009278	152009294	protein_coding	Ptchd1	exon	ENSMUSG00000041552	NonProperStrand	294	chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	2	-13.5202
chr4	56910549	56910618	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	chr8	112363236	112363275	snoRNA	ENSMUSG00000077549_Snord71	.	ENSMUSG00000077549	ProperStrand	196	4	-12.4872
chr5	108260488	108260504	protein_coding	Evi5	intron	ENSMUSG00000011831	NonProperStrand	7	chr7	13516166	13516200	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	1	-13.0895
chr8	87554078	87554109	protein_coding	2310036O22Rik	utr3	ENSMUSG00000041203	ProperStrand	4	chr7	148634782	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-9.5448
chr13	44964951	44965391	protein_coding	Jarid2	intron	ENSMUSG00000038518	ProperStrand	372	chr16	57391625	57391725	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	5	-21.5392
chr1	158371615	158372574	protein_coding	Soat1	exon	ENSMUSG00000026600	ProperStrand	21	chr5	108334238	108336486	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-6.8940
chr1	45448521	45448537	protein_coding	Col5a2	exon	ENSMUSG00000026042	ProperStrand	184	chr11	62418013	62418073	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-3.4284
chr2	129998643	129998715	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr8	73419657	73419773	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	8	-3.2558
chr11	117012024	117014461	protein_coding	Sec14l1	exon	ENSMUSG00000020823	ProperStrand	71	chr7	16524179	16524201	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	1	-9.3804
chr18	10052128	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr15	79908930	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	2	-2.7470
chr14	92284418	92284498	LINE	L1Md_F2	L1	chr14L1Md_F292284315	NonProperStrand	1	chr14	92284672	92284762	LINE	L1Md_F2	L1	chr14L1Md_F292284610	ProperStrand	1	1	-inf
chr4	94254066	94254183	protein_coding	Plaa	exon	ENSMUSG00000028577	ProperStrand	40	chr16	23110959	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-2.5172
chr11	120120399	120120464	protein_coding	Bahcc1	exon	ENSMUSG00000039741	ProperStrand	118	chr16	23110456	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.3953
chr18	38409775	38409791	lincRNA	1700086O06Rik	exon	ENSMUSG00000086988	NonProperStrand	28	chr1	162967514	162967564	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-8.1587
chr8	109192311	109192349	protein_coding	Cdh1	exon	ENSMUSG00000000303	ProperStrand	283	chr7	134341340	134341357	protein_coding	Tbc1d10b	utr3	ENSMUSG00000042492	ProperStrand	187	1	-7.9316
chr13	44965303	44965385	protein_coding	Jarid2	intron	ENSMUSG00000038518	ProperStrand	372	chr2	166410751	166411278	protein_coding	Prex1	exon	ENSMUSG00000039621	NonProperStrand	9	1	-13.5463
chr2	90235314	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	47293798	47294384	protein_coding	Slc25a4	exon	ENSMUSG00000031633	ProperStrand	53	2	-7.7963
chr7	67123712	67123729	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	chr1	89673731	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	2	-1.1077
chr1	71341491	71341509	protein_coding	Abca12	exon	ENSMUSG00000050296	NonProperStrand	143	chr18	33954843	33954933	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-1.9979
chr19	46452832	46452884	protein_coding	Actr1a	utr3	ENSMUSG00000025228	ProperStrand	27	chrX	34622927	34623017	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-4.6723
chr1	59541095	59541116	protein_coding	Fzd7	exon	ENSMUSG00000041075	ProperStrand	373	chr5	115939533	115939615	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	5	-17.1587
chr11	59476246	59476320	protein_coding	Mprip	utr5	ENSMUSG00000005417	ProperStrand	58	chrX	34589398	34589415	protein_coding	Sowahd	exon	ENSMUSG00000044400	ProperStrand	26	1	-15.0641
chr1	72272876	72272956	snRNA	ENSMUSG00000075752_U2	.	ENSMUSG00000075752	ProperStrand	535	chr8	73419655	73419745	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	4	-1.7336
chr11	8658727	8658817	LTR	RLTR13D6	ERVK	chr11RLTR13D68658474	ProperStrand	1	chr7	54442591	54442680	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-inf
chr1	13630670	13630712	protein_coding	Lactb2	intron	ENSMUSG00000025937	ProperStrand	9	chr17	13112498	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	5	-19.2152
chr5	93600512	93600585	protein_coding	Sept11	utr3	ENSMUSG00000058013	ProperStrand	79	chr7	67123714	67123759	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	2	-14.2537
chr8	107455026	107455042	protein_coding	Ces2e	exon	ENSMUSG00000031886	ProperStrand	3	chr1	54485731	54485772	protein_coding	Gtf3c3	exon	ENSMUSG00000041303	ProperStrand	11	1	-20.0073
chr11	51551290	51551426	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	chr10	110918549	110918643	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	4	-0.7147
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr7	52382627	52382912	protein_coding	Rpl13a	exon	ENSMUSG00000074129	ProperStrand	269	1	-5.3539
chr11	113423607	113423624	protein_coding	Slc39a11	intron	ENSMUSG00000041654	NonProperStrand	39	chr19	8963027	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.0232
chr11	88705736	88705764	protein_coding	Akap1	exon	ENSMUSG00000018428	ProperStrand	45	chr9	120039623	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-6.5066
chr9	70614747	70614770	protein_coding	Adam10	exon	ENSMUSG00000054693	ProperStrand	12	chr5	118053133	118053150	protein_coding	Ksr2	intron	ENSMUSG00000061578	ProperStrand	36	1	-17.6460
chr2	59963461	59963481	protein_coding	Baz2b	intron	ENSMUSG00000026987	ProperStrand	15	chr13	34436854	34436870	protein_coding	Slc22a23	utr5	ENSMUSG00000038267	ProperStrand	95	1	-15.2023
chr11	6305096	6305135	protein_coding	Zmiz2	utr3	ENSMUSG00000041164	ProperStrand	69	chr16	23109071	23109093	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-7.0038
chr12	55797773	55797835	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	chr18	33954867	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	4	-0.7690
chr15	81742672	81742740	protein_coding	Aco2	exon	ENSMUSG00000022477	ProperStrand	237	chr7	150717298	150717362	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-2.9273
chr7	38891806	38892346	protein_coding	Ccne1	utr5	ENSMUSG00000002068	ProperStrand	14	chr16	3985838	3985910	protein_coding	Slx4	exon	ENSMUSG00000039738	ProperStrand	18	4	-inf
chr12	110782335	110782436	lincRNA	Meg3	exon	ENSMUSG00000021268	ProperStrand	61	chr9	120038643	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	3	-7.6909
chr18	84622024	84622124	protein_coding	Zfp407	intron	ENSMUSG00000048410	ProperStrand	34	chr1	162966812	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-7.3896
chr3	144817605	144817621	LINE	Lx9	L1	chr3Lx9144817450	ProperStrand	30	chr2	38280204	38280223	lincRNA	Gm13589	intron	ENSMUSG00000085950	NonProperStrand	31	1	-16.0419
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr6	8185634	8185650	protein_coding	Mios	utr3	ENSMUSG00000042447	NonProperStrand	40	1	-10.1860
chr2	165884144	165886323	protein_coding	Ncoa3	exon	ENSMUSG00000027678	ProperStrand	58	chr10	23505152	23505268	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-2.4578
chr5	89102000	89102069	protein_coding	Grsf1	intron	ENSMUSG00000044221	ProperStrand	24	chr11	6428060	6428160	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.9246
chr5	116042416	116042506	protein_coding	Gcn1l1	exon	ENSMUSG00000041638	ProperStrand	408	chr7	123476557	123477215	protein_coding	Rps13	exon	ENSMUSG00000090862	ProperStrand	36	1	-10.5037
chrX	147431729	147431819	protein_coding	Gnl3l	exon	ENSMUSG00000025266	ProperStrand	52	chr11	69483200	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.6966
chr1	173341933	173341949	protein_coding	Usf1	utr5	ENSMUSG00000026641	NonProperStrand	144	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-6.8504
chr11	113513363	113513379	protein_coding	Cog1	exon	ENSMUSG00000018661	NonProperStrand	38	chr19	8800421	8800448	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-4.3894
chr6	131330290	131330425	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	ProperStrand	408	chr16	23110827	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	18	-1.1378
chr8	55418768	55418858	LINE	L1_Mm	L1	chr8L1_Mm55418704	ProperStrand	1	chr8	55410860	55410940	LINE	Lx9	L1	chr8Lx955410803	ProperStrand	1	1	-inf
chrX	84483698	84483727	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr2	79843543	79843559	protein_coding	Pde1a	intron	ENSMUSG00000059173	NonProperStrand	275	2	-8.6021
chr4	133235698	133235728	protein_coding	Arid1a	utr3	ENSMUSG00000007880	ProperStrand	465	chr8	73296048	73296107	protein_coding	Pik3r2	exon	ENSMUSG00000031834	ProperStrand	22	3	-20.5007
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr9	41877619	41877637	protein_coding	Sorl1	intron	ENSMUSG00000049313	NonProperStrand	10	1	-9.5334
chr9	41773686	41773744	protein_coding	Sorl1	utr3	ENSMUSG00000049313	ProperStrand	112	chr17	35087894	35087920	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	3	-9.7337
chr13	62944660	62944677	protein_coding	Fbp2	intron	ENSMUSG00000021456	ProperStrand	100	chr9	59519406	59519476	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	1	-6.1677
chr2	3257869	3257947	protein_coding	Acbd7	intron	ENSMUSG00000026644	ProperStrand	1	chr16	23110961	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr2	57090809	57090827	protein_coding	Gpd2	utr5	ENSMUSG00000026827	ProperStrand	93	chr10	40599918	40599934	protein_coding	Cdc40	intron	ENSMUSG00000038446	ProperStrand	34	1	-13.5767
mmu-miR-6240	2	23	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr17	36097663	36097764	protein_coding	Abcf1	exon	ENSMUSG00000038762	ProperStrand	206	1	-3.5467
chrX	71025624	71025951	protein_coding	Idh3g	exon	ENSMUSG00000002010	NonProperStrand	1	chr17	12883022	12883038	protein_coding	Igf2r	exon	ENSMUSG00000023830	NonProperStrand	8	1	-inf
chr11	115999916	115999932	protein_coding	Mrpl38	exon	ENSMUSG00000020775	NonProperStrand	65	chr1	130275430	130283706	protein_coding	Dars	exon	ENSMUSG00000026356	ProperStrand	28	1	-14.6932
chr11	69711416	69711516	protein_coding-noncoding	2810408A11Rik	utr3	ENSMUSG00000018570	ProperStrand	1	chr15	79913288	79913346	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-inf
chr1	36873088	36875578	protein_coding	Tmem131	exon	ENSMUSG00000026116	ProperStrand	129	chr9	15119313	15119403	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-3.6557
chr10	80643336	80643390	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr6	45965480	46120177	protein_coding	Cntnap2	exon	ENSMUSG00000039419	NonProperStrand	283	1	-3.1518
chr17	3187710	3190201	protein_coding	Scaf8	exon	ENSMUSG00000046201	ProperStrand	126	chr11	68886928	68887008	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-2.7879
chr6	56828734	56828751	protein_coding	Fkbp9	utr3	ENSMUSG00000029781	NonProperStrand	6	chr1	155287326	155287354	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	1	-13.7348
chr8	4267337	4267649	protein_coding	Timm44	exon	ENSMUSG00000002949	ProperStrand	63	chr10	39978325	39978371	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-5.3643
chr13	12366046	12366062	protein_coding	Actn2	intron	ENSMUSG00000052374	NonProperStrand	11	chr11	106362639	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-10.8565
chr11	61283362	61283379	LTR	RLTR20B3	ERVK	chr11RLTR20B361283341	ProperStrand	10	chr4	131908693	131908793	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.3231
chr16	36913896	36913912	protein_coding	Golgb1	exon	ENSMUSG00000034243	ProperStrand	92	chr18	73693167	73693187	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-4.6960
chr10	33660007	33663477	protein_coding	Zufsp	exon	ENSMUSG00000039531	ProperStrand	9	chr7	29136588	29136654	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.9747
chr4	43440204	43440222	protein_coding	Fam166b	exon	ENSMUSG00000042788	ProperStrand	2	chr16	23111704	23111754	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-8.9529
chr7	112783657	112783731	protein_coding	Arfip2	utr3	ENSMUSG00000030881	ProperStrand	191	chr7	117190001	117190060	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-1.4139
chr4	131908362	131908442	lincRNA	Gm17300	exon	ENSMUSG00000091021	ProperStrand	109	chr4	131866252	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	NonProperStrand	19	1	-14.4447
chr6	64088283	64088301	protein_coding	Grid2	intron	ENSMUSG00000071424	NonProperStrand	76	chr7	52382755	52382832	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-6.2843
chr11	48613871	48613961	protein_coding	Gnb2l1	utr5	ENSMUSG00000020372	ProperStrand	347	chr15	98356819	98356900	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	1	-4.3242
chrX	101478301	101478317	protein_coding	Abcb7	utr3	ENSMUSG00000031333	NonProperStrand	4	chr8	73419743	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-8.6136
chrX	101017112	101017128	protein_coding	Slc16a2	exon	ENSMUSG00000033965	ProperStrand	35	chr2	104250240	104250257	protein_coding	D430041D05Rik	exon	ENSMUSG00000068373	ProperStrand	12	1	-17.5832
chrX	162844534	162846530	protein_coding	Ofd1	exon	ENSMUSG00000040586	NonProperStrand	11	chr19	8800084	8800136	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-11.0619
chr15	8243036	8243136	protein_coding	Nipbl	intron	ENSMUSG00000022141	ProperStrand	45	chr16	23109051	23109090	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-7.8565
chr5	86614439	86614455	protein_coding	Gnrhr	exon	ENSMUSG00000029255	NonProperStrand	13	chr12	17552949	17553072	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	3	-18.3812
chr11	116110088	116112088	protein_coding	Srp68	exon	ENSMUSG00000020780	ProperStrand	42	chr16	23110456	23110536	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.0882
chrX	45475094	45475111	protein_coding	Xpnpep2	exon	ENSMUSG00000037005	ProperStrand	32	chr7	134341340	134341357	protein_coding	Tbc1d10b	utr3	ENSMUSG00000042492	ProperStrand	187	1	-12.3037
chr11	59568873	59568947	protein_coding	Mprip	intron	ENSMUSG00000005417	ProperStrand	58	chr9	15118322	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	6	-18.8364
chr3	134230236	134230257	lincRNA	Gm16742	intron	ENSMUSG00000084777	ProperStrand	4	chr11	68886974	68887037	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-9.7129
chr16	85280907	85280924	LINE	L1M5	L1	chr16L1M585280779	NonProperStrand	30	chr5	114293522	114293570	protein_coding	Coro1c	utr3	ENSMUSG00000004530	ProperStrand	44	1	-15.3452
chr9	78023109	78023148	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr16	97965827	97967474	protein_coding	Ripk4	exon	ENSMUSG00000005251	ProperStrand	28	1	-7.3942
chr2	90235317	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	54105668	54106268	protein_coding	Ldha	exon	ENSMUSG00000063229	ProperStrand	280	2	-3.2034
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr16	38089866	38089882	protein_coding	Gsk3b	utr5	ENSMUSG00000022812	ProperStrand	80	1	-12.5743
chr11	69481334	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	chr3	95980309	95980411	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	23	-12.3919
chr12	60476078	60476094	LTR	LTR16D	ERVL	chr12LTR16D60475969	NonProperStrand	17	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-14.2512
chr9	44216871	44216948	protein_coding	Rps25	exon	ENSMUSG00000009927	ProperStrand	42	chr11	100359631	100359998	protein_coding	Acly	exon	ENSMUSG00000020917	ProperStrand	183	1	-11.7958
chr3	68840617	68840691	protein_coding	Trim59	utr3	ENSMUSG00000034317	ProperStrand	22	chr19	46022236	46022252	protein_coding	9130011E15Rik	intron	ENSMUSG00000039901	ProperStrand	129	1	-13.8124
chr4	131866155	131866256	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	chr13	90238585	90238721	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	2	-0.7602
chr4	109148979	109148996	protein_coding	Rnf11	utr5	ENSMUSG00000028557	NonProperStrand	3	chr9	15118287	15118321	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-9.6743
chr14	121643342	121643390	protein_coding	Farp1	intron	ENSMUSG00000025555	ProperStrand	18	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-11.0322
chr9	60017435	60017455	protein_coding	Thsd4	intron	ENSMUSG00000032289	NonProperStrand	9	chr6	71832625	71832687	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-9.4562
chr6	135024165	135024213	protein_coding	Gprc5a	intron	ENSMUSG00000046733	NonProperStrand	2	chr14	104865643	104865660	protein_coding	Pou4f1	exon	ENSMUSG00000048349	ProperStrand	5	1	-21.6030
chr6	28833286	28838251	protein_coding	Snd1	exon	ENSMUSG00000001424	ProperStrand	210	chr7	116664794	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	4	-3.7287
chr8	3803244	3803324	misc_RNA	RNaseP_nuc	.	ENSMUSG00000088025	ProperStrand	328	chr15	34370545	34370635	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-0.8640
chr13	58497571	58498195	protein_coding	Hnrnpk	exon	ENSMUSG00000021546	ProperStrand	117	chr2	158451026	158451043	protein_coding	Actr5	exon	ENSMUSG00000037761	NonProperStrand	94	3	-18.5211
chr8	129468723	129468762	protein_coding	Tomm20	intron	ENSMUSG00000058779	ProperStrand	55	chr1	59749357	59749386	snoRNA	ENSMUSG00000077358_SNORD70	.	ENSMUSG00000077358	ProperStrand	63	1	-13.3905
chr16	96391526	96391613	protein_coding	Lca5l	intron	ENSMUSG00000045275	NonProperStrand	210	chr4	116827123	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	3	-10.9214
chr4	133687350	133688247	protein_coding	Ccdc21	exon	ENSMUSG00000037443	ProperStrand	112	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-7.7324
chr4	122924415	122924432	protein_coding	Heyl	utr3	ENSMUSG00000032744	ProperStrand	31	chr19	8800361	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	7	-20.1180
chr13	55573298	55573378	protein_coding	Prr7	utr5	ENSMUSG00000034686	ProperStrand	15	chr2	166890493	166890583	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-10.3658
chr11	62416575	62416599	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr10	19886574	19886591	protein_coding	Mtap7	intron	ENSMUSG00000019996	NonProperStrand	16	1	-11.6548
chr11	116203956	116204046	protein_coding	Rnf157	intron	ENSMUSG00000052949	ProperStrand	32	chr4	131866158	131866238	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-4.8615
chr6	71797881	71824960	protein_coding	Immt	utr3	ENSMUSG00000052337	ProperStrand	48	chr16	23110841	23110989	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.1542
chr11	95824765	95824826	protein_coding	Igf2bp1	utr3	ENSMUSG00000013415	ProperStrand	140	chr17	13112465	13112555	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-3.0076
chr15	89259012	89259058	protein_coding-noncoding	Chkb	utr3	ENSMUSG00000022617	ProperStrand	4	chr18	33954899	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-14.8291
chr11	116535913	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr7	86526553	86526653	protein_coding	Rlbp1	exon	ENSMUSG00000039194	ProperStrand	4	1	-11.5504
chr11	69037669	69037685	protein_coding	Gucy2e	exon	ENSMUSG00000020890	NonProperStrand	99	chr7	52378398	52378437	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	1	-7.5048
chr4	107068385	107083708	protein_coding	Tmem48	exon	ENSMUSG00000028614	ProperStrand	42	chr19	8800377	8800457	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-4.1983
chr10	80643872	80643893	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr9	78214983	78215046	protein_coding	Dppa5a	utr3	ENSMUSG00000060461	ProperStrand	79	2	-9.0879
chr6	92801245	92801263	protein_coding	Adamts9	intron	ENSMUSG00000030022	ProperStrand	27	chr5	108336363	108336409	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-6.4517
chr2	131013951	131018857	protein_coding	Cdc25b	exon	ENSMUSG00000027330	ProperStrand	20	chr16	23110962	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-4.8132
chr11	77995078	77996402	protein_coding	Rpl23a	exon	ENSMUSG00000058546	ProperStrand	121	chr9	15119639	15119968	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	5	-8.1378
chr4	135607189	135607590	protein_coding	Rpl11	exon	ENSMUSG00000059291	ProperStrand	152	chr11	69481397	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-1.6420
chr7	13615530	13615823	protein_coding	Trim28	exon	ENSMUSG00000005566	ProperStrand	296	chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	1	-8.2416
chr2	90235299	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	83138737	83138753	protein_coding	Frem3	exon	ENSMUSG00000042353	NonProperStrand	53	1	-4.7006
chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	chr4	130305584	130305605	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	1	-6.6909
chr17	53002018	53002041	protein_coding	Kcnh8	intron	ENSMUSG00000035580	NonProperStrand	3	chr9	120038613	120038677	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-9.2011
chr1	80283599	80283689	protein_coding	Cul3	exon	ENSMUSG00000004364	ProperStrand	15	chr17	13112470	13112550	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-7.3293
chr9	49465446	49465543	protein_coding	Ncam1	intron	ENSMUSG00000039542	ProperStrand	18	chr1	162967516	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-5.7965
chr4	131399490	131399506	protein_coding	Mecr	exon	ENSMUSG00000028910	NonProperStrand	109	chrX	149828130	149828146	protein_coding	Klf8	utr3	ENSMUSG00000041649	NonProperStrand	107	1	-10.9520
chr4	148494139	148494156	protein_coding	Dffa	utr3	ENSMUSG00000028974	ProperStrand	55	chr11	68886947	68887033	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-4.3090
chr4	43505727	43505873	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr3	88497890	88497981	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	17	-9.0104
chr10	40982890	40983705	protein_coding	Fig4	exon	ENSMUSG00000038417	ProperStrand	18	chr5	108334210	108334269	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	2	-11.6399
chr18	74938039	74938130	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	ProperStrand	1022	chr5	74489544	74489624	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	10	-5.9704
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	20310054	20310070	protein_coding	Pvrl2	exon	ENSMUSG00000062300	ProperStrand	110	1	-3.3307
chr1	36569411	36569428	protein_coding	Cnnm3	exon	ENSMUSG00000001138	ProperStrand	58	chr11	77995188	77995257	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-6.2496
chr11	119136228	119136244	protein_coding	Gaa	exon	ENSMUSG00000025579	NonProperStrand	201	chr11	102465875	102465893	protein_coding	Fzd2	utr5	ENSMUSG00000050288	ProperStrand	15	1	-13.7103
chrX	46444104	46444121	protein_coding	Enox2	intron	ENSMUSG00000031109	NonProperStrand	1	chr13	44964961	44965035	protein_coding	Jarid2	intron	ENSMUSG00000038518	ProperStrand	372	1	-inf
chr10	80641717	80641766	protein_coding	Eef2	intron	ENSMUSG00000034994	ProperStrand	2244	chr2	101792230	101792330	protein_coding	Ldlrad3	utr3	ENSMUSG00000048058	ProperStrand	53	1	-6.3440
chr7	52232254	52232334	protein_coding	Prmt1	utr3	ENSMUSG00000052429	ProperStrand	21	chr17	30355939	30356029	protein_coding	Btbd9	utr3	ENSMUSG00000062202	ProperStrand	31	1	-16.6937
chr14	64116444	64119014	protein_coding	Tdh	exon	ENSMUSG00000021953	ProperStrand	67	chr6	115758015	115758095	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-5.2568
chr17	45738186	45738276	protein_coding	Gm7325	utr3	ENSMUSG00000079471	ProperStrand	9	chr3	123210854	123210956	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-9.3504
chr17	24342579	24343602	protein_coding	Ntn3	utr3	ENSMUSG00000079662	ProperStrand	237	chr4	131865853	131865988	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	6	-3.5192
chr9	64954192	64954209	protein_coding	Igdcc4	intron	ENSMUSG00000032816	ProperStrand	29	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-10.3934
chr2	155923947	155924037	protein_coding	Rbm12	exon	ENSMUSG00000089824	ProperStrand	26	chr16	23111374	23111456	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	11	-19.7523
chr4	94167899	94167999	protein_coding	5830433M19Rik	exon	ENSMUSG00000028578	ProperStrand	5	chr19	8799854	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-10.0468
chr1	29666277	29666294	LTR	MMERVK10C-int	ERVK	chr1MMERVK10C-int29665214	ProperStrand	10	chr8	73419725	73419786	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-6.6208
chr12	70462393	70462472	misc_RNA	AC157822.1	.	ENSMUSG00000092773	ProperStrand	18	chr9	120037933	120037990	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-7.0883
chr4	90927880	90927901	protein_coding	Elavl2	intron	ENSMUSG00000008489	NonProperStrand	2	chr7	29136549	29136642	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-9.5181
chr11	6520359	6520449	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	chr2	130101241	130101286	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-1.5058
chr2	121949510	121949527	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	chr16	38158144	38158222	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	1	-5.6730
chr4	57268565	57268583	protein_coding	Ptpn3	intron	ENSMUSG00000038764	ProperStrand	48	chr14	31827477	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-7.3893
chr15	12763591	12763663	protein_coding	Drosha	exon	ENSMUSG00000022191	ProperStrand	163	chr16	23111694	23111734	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-3.2318
chr19	6058501	6059172	protein_coding	Fau	exon	ENSMUSG00000038274	ProperStrand	64	chr7	118219574	118219612	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-4.0486
chr11	120677777	120679469	protein_coding	Fasn	exon	ENSMUSG00000025153	ProperStrand	298	chr7	116664796	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	7	-6.0253
chr8	83138737	83138753	protein_coding	Frem3	exon	ENSMUSG00000042353	NonProperStrand	53	chr5	108334195	108334250	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-5.0600
chr3	34116007	34116097	non_coding	Sox2ot	.	ENSMUSG00000090828	NonProperStrand	13	chr3	34112991	34113071	non_coding	Sox2ot	.	ENSMUSG00000090828	ProperStrand	25	1	-17.9911
chr6	87863893	87863910	lincRNA	Gm16723	intron	ENSMUSG00000085703	ProperStrand	13	chr7	116664811	116664901	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-5.4346
chr15	91532461	91532512	protein_coding	Lrrk2	intron	ENSMUSG00000036273	ProperStrand	8	chr6	145564547	145564563	protein_coding	Tuba3b	utr5	ENSMUSG00000067338	ProperStrand	152	1	-15.5645
chr9	29672403	29672419	protein_coding	Ntm	intron	ENSMUSG00000059974	ProperStrand	49	chr11	97643062	97643078	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.8235
chr12	114154824	114154870	protein_coding	Jag2	exon	ENSMUSG00000002799	ProperStrand	28	chr2	144087375	144087447	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	2	-12.9058
chr17	35982784	35995133	protein_coding	Mdc1	utr3	ENSMUSG00000061607	ProperStrand	85	chr7	150717296	150717425	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	2	-7.9836
chr3	45780645	45780665	LINE	Lx2B	L1	chr3Lx2B45780445	ProperStrand	34	chr19	25485906	25485953	protein_coding	Kank1	exon	ENSMUSG00000032702	ProperStrand	218	1	-11.8728
chr11	102927241	102927302	protein_coding	Nmt1	utr3	ENSMUSG00000020936	ProperStrand	43	chr7	116664821	116664922	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-7.9864
chr16	37384897	37384913	protein_coding	Stxbp5l	utr5	ENSMUSG00000022829	ProperStrand	332	chr11	48670538	48670558	tRNA	tRNA2021-LeuAAG	.	1900168	ProperStrand	13	1	-13.0013
chr18	73693166	73693186	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr8	34802366	34802416	snoRNA	ENSMUSG00000088856_SNORA48	.	ENSMUSG00000088856	ProperStrand	236	1	-2.9505
chr5	74489203	74489293	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr10	80641693	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	1	-0.7567
chr2	4974190	4974207	protein_coding	Optn	exon	ENSMUSG00000026672	ProperStrand	451	chr9	103091286	103091337	protein_coding	Srprb	utr3	ENSMUSG00000032553	ProperStrand	11	1	-12.7370
chr11	68715905	68718017	protein_coding	Rpl26	utr3	ENSMUSG00000060938	ProperStrand	130	chr11	69481332	69481432	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	5	-9.4830
chr10	39679447	39679464	protein_coding	BC021785	utr3	ENSMUSG00000038528	NonProperStrand	13	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-6.5816
chr16	5100103	5100119	protein_coding	Ppl	exon	ENSMUSG00000039457	ProperStrand	37	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-6.1497
chr15	31527306	31527786	protein_coding	Cct5	exon	ENSMUSG00000022234	ProperStrand	116	chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	1	-7.1903
chr7	129133010	129133083	protein_coding	Gga2	utr3	ENSMUSG00000030872	ProperStrand	65	chr7	117189864	117189954	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-6.0515
chr1	129987709	129987799	protein_coding	Zranb3	intron	ENSMUSG00000036086	ProperStrand	19	chr16	23110926	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7016
chr12	70258791	70259710	protein_coding	Rps29	exon	ENSMUSG00000034892	ProperStrand	124	chr10	84577882	84577972	protein_coding	AI597468	utr3	ENSMUSG00000060935	ProperStrand	8	2	-inf
chr1	173433178	173433255	protein_coding	B930036N10Rik	utr3	ENSMUSG00000091993	ProperStrand	150	chr7	29136557	29136647	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-0.9978
chr19	5796783	5796819	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr5	34994528	34995032	protein_coding	Nop14	exon	ENSMUSG00000036693	ProperStrand	35	1	-8.6255
chr2	90235294	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	187066847	187066917	snoRNA	ENSMUSG00000077571_Snora36b	.	ENSMUSG00000077571	ProperStrand	244	2	-3.5480
chr6	87238777	87258365	protein_coding	Antxr1	exon	ENSMUSG00000033420	ProperStrand	70	chr7	117190025	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.0537
chr11	97641464	97641554	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	chr7	150717344	150717424	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-0.8659
chr10	68966900	68966919	SINE	PB1D7	Alu	chr10PB1D768966876	ProperStrand	1	chr15	34370631	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-inf
chr11	58123046	58123064	protein_coding	Zfp692	exon	ENSMUSG00000037243	ProperStrand	4	chr11	33059948	33060336	protein_coding	Npm1	exon	ENSMUSG00000057113	ProperStrand	352	2	-21.6925
chr14	13338400	13341614	protein_coding	Cadps	exon	ENSMUSG00000054423	ProperStrand	32	chr7	29136534	29136614	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.4817
chr16	4065350	4065366	protein_coding	Trap1	exon	ENSMUSG00000005981	ProperStrand	25	chr7	116664817	116664921	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-10.1540
chr4	134893863	134893963	protein_coding	Srrm1	exon	ENSMUSG00000028809	ProperStrand	142	chr1	162965570	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.8102
chr13	97949144	97949162	protein_coding	Gfm2	utr3	ENSMUSG00000021666	ProperStrand	26	chrX	34622906	34623021	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	3	-11.3699
chr9	114671305	114672398	protein_coding	Cmtm7	exon	ENSMUSG00000032436	ProperStrand	13	chr5	122580412	122584741	protein_coding	Ccdc63	utr5	ENSMUSG00000043036	ProperStrand	120	1	-15.0432
chr12	47505853	47505872	LTR	MLT1A1	MaLR	chr12MLT1A147505856	NonProperStrand	5	chr10	110918604	110918694	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	3	-19.5524
chr13	96247406	96248477	protein_coding	S100z	exon	ENSMUSG00000021679	NonProperStrand	43	chr3	88715213	88715230	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-7.8999
chr15	102076529	102076545	protein_coding	Rarg	exon	ENSMUSG00000001288	NonProperStrand	1	chr1	64782400	64782419	protein_coding	Fzd5	exon	ENSMUSG00000045005	ProperStrand	175	1	-inf
chr1	89203671	89203761	protein_coding	Efhd1	intron	ENSMUSG00000026255	NonProperStrand	2	chr1	89589107	89589197	protein_coding	Inpp5d	intron	ENSMUSG00000026288	ProperStrand	75	1	-inf
chr10	82358743	82358762	protein_coding	Txnrd1	exon	ENSMUSG00000020250	ProperStrand	47	chr19	12086441	12086495	tRNA	tRNA109-ValTAC	.	616260	ProperStrand	96	2	-inf
chr10	95445520	95445584	protein_coding	Eea1	intron	ENSMUSG00000036499	ProperStrand	82	chr17	35299507	35299550	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-4.1809
chr16	23110986	23111010	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr11	69717429	69717529	protein_coding	Neurl4	exon	ENSMUSG00000047284	ProperStrand	28	2	-16.5624
chr2	4802676	4802693	protein_coding	Sephs1	utr5	ENSMUSG00000026662	ProperStrand	20	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.3741
chr5	33107590	33117053	protein_coding	RP23-118L1.1	exon	ENSMUSG00000093574	ProperStrand	9	chr4	131908357	131908452	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.8019
chr10	121053733	121056174	protein_coding	Xpot	exon	ENSMUSG00000034667	ProperStrand	35	chr16	23111389	23111469	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.0755
chr15	91021491	91021507	protein_coding	Abcd2	exon	ENSMUSG00000055782	ProperStrand	2	chr12	106269284	106269384	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-11.4969
chr19	46010912	46014946	protein_coding	9130011E15Rik	exon	ENSMUSG00000039901	NonProperStrand	5	chr4	131908687	131908744	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.7672
chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr7	150253572	150253657	protein_coding	Cd81	utr3	ENSMUSG00000037706	ProperStrand	88	1	-5.7007
chr13	21485214	21485258	protein_coding	Zkscan3	utr3	ENSMUSG00000021327	ProperStrand	9	chr14	121865618	121865637	protein_coding	Slc15a1	intron	ENSMUSG00000025557	ProperStrand	14	1	-inf
chr11	100755256	100755517	protein_coding	Stat3	exon	ENSMUSG00000004040	ProperStrand	20	chr9	120039565	120039623	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	3	-12.7920
chr16	94861822	94861907	protein_coding	Dyrk1a	intron	ENSMUSG00000022897	ProperStrand	17	chr9	15118323	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-5.9029
chr2	26203131	26203147	protein_coding	Gpsm1	utr3	ENSMUSG00000026930	ProperStrand	93	chr15	79908930	79908956	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-4.6247
chr17	35275325	35281576	protein_coding	Bag6	exon	ENSMUSG00000024392	ProperStrand	181	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	11	-2.6432
chr2	179922985	179923066	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr14	33005038	33005064	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	3	-3.2500
chr2	109516160	109516176	protein_coding	Bdnf	utr5	ENSMUSG00000048482	NonProperStrand	47	chr11	116704876	116704917	protein_coding	1110005A03Rik	utr5	ENSMUSG00000090266	ProperStrand	8	1	-18.0973
chr2	103636986	103637002	protein_coding	Caprin1	exon	ENSMUSG00000027184	NonProperStrand	2	chr7	116664858	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-9.7350
chr11	6304187	6304230	protein_coding	Zmiz2	exon	ENSMUSG00000041164	ProperStrand	69	chr7	51505237	51505308	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	3	-17.5239
chr3	68765558	68765648	protein_coding	Ift80	intron	ENSMUSG00000027778	ProperStrand	6	chr3	156262985	156263065	protein_coding	Negr1	intron	ENSMUSG00000040037	ProperStrand	14	1	-21.9305
chr11	55048380	55048480	protein_coding	Slc36a1	utr3	ENSMUSG00000020261	ProperStrand	11	chr16	23110533	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.6740
chr4	144479065	144479145	LTR	MTC	MaLR	chr4MTC144478989	ProperStrand	1	chr4	144478909	144478999	SINE	B4A	B4	chr4B4A144478715	ProperStrand	1	1	-inf
chr17	24858581	24858759	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr9	62689429	62689509	pseudogene	Gm10653	.	ENSMUSG00000074250	ProperStrand	1	1	-inf
chr6	83687770	83687787	protein_coding	Vax2	exon	ENSMUSG00000034777	NonProperStrand	5	chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	1	-16.8426
chr14	65372839	65372866	snoRNA	ENSMUSG00000064442_SNORA36	.	ENSMUSG00000064442	ProperStrand	296	chr11	62418067	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-2.5855
chr7	108971290	108971306	protein_coding	Inppl1	utr3	ENSMUSG00000032737	ProperStrand	272	chr1	137481818	137481836	protein_coding	Gm4793	exon	ENSMUSG00000054412	ProperStrand	1	1	-inf
chr1	88253647	88253747	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chr18	75161534	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-1.6970
chr7	106627842	106627899	protein_coding	Rps3	exon	ENSMUSG00000030744	ProperStrand	159	chr16	23111760	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-3.3214
chr10	62869899	62870977	protein_coding	Dnajc12	exon	ENSMUSG00000036764	ProperStrand	4	chr16	23110986	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.6489
chr5	73455223	73455280	protein_coding	Fryl	intron	ENSMUSG00000070733	ProperStrand	173	chr5	111121090	111121180	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-4.3779
chr1	174264624	174264640	SINE	B4A	B4	chr1B4A174264509	NonProperStrand	9	chr7	13516164	13516198	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	1	-12.5500
chr6	128397846	128397882	lincRNA	Gm10069	intron	ENSMUSG00000059659	ProperStrand	3	chr9	35075582	35075599	protein_coding	Rpusd4	exon	ENSMUSG00000032044	NonProperStrand	2	1	-inf
chr17	27699673	27699773	protein_coding	Hmga1	utr3	ENSMUSG00000046711	ProperStrand	180	chr14	31827478	31827519	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-4.7957
mmu-miR-2137	0	17	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	chr1	162968451	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-4.3827
chr9	78023110	78023150	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr9	96101555	96101614	protein_coding	Tfdp2	intron	ENSMUSG00000032411	ProperStrand	95	3	-11.7350
chr11	61932629	61932703	protein_coding	Specc1	exon	ENSMUSG00000042331	ProperStrand	11	chr11	69483136	69483194	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-5.6603
chr2	79167704	79167773	protein_coding	Itga4	utr3	ENSMUSG00000027009	ProperStrand	3	chr11	69483197	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-8.5256
chr16	17776659	17776681	protein_coding	Klhl22	exon	ENSMUSG00000022750	ProperStrand	22	chr11	69481386	69481476	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	3	-12.1314
chr14	45838966	45839011	protein_coding	Txndc16	utr5	ENSMUSG00000021830	ProperStrand	4	chr7	116663738	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-7.9103
chr12	8985463	8987885	protein_coding	Wdr35	exon	ENSMUSG00000066643	ProperStrand	10	chr11	69483194	69483246	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-5.8555
chr17	80604747	80605221	protein_coding	Srsf7	exon	ENSMUSG00000024097	ProperStrand	31	chr5	74489606	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-5.0408
chr16	23110454	23110526	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	chr13	21262124	21262159	tRNA	tRNA63-LeuAAG	.	238874	ProperStrand	21	1	-4.3878
chr1	74521711	74526233	protein_coding	Usp37	exon	ENSMUSG00000033364	ProperStrand	47	chr7	29136585	29136653	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.7863
chr11	121302704	121302720	protein_coding	Fn3k	utr3	ENSMUSG00000025175	NonProperStrand	1	chr12	55797781	55797871	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	1	-inf
chr11	6519809	6519926	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	chrX	34622906	34623033	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	5	-1.0754
chr19	5108621	5108647	protein_coding	Klc2	exon	ENSMUSG00000024862	ProperStrand	25	chr16	23111374	23111500	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.6475
chrX	7752870	7752886	protein_coding	Tbc1d25	exon	ENSMUSG00000039201	ProperStrand	126	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-2.6237
chr7	52085054	52085145	protein_coding	Nup62	exon	ENSMUSG00000043858	ProperStrand	47	chr17	35299561	35299641	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-5.2508
chr12	86369933	86370033	protein_coding	Ylpm1	exon	ENSMUSG00000021244	ProperStrand	100	chr7	118219574	118219610	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-3.2241
chr11	42440243	42440259	protein_coding	Gabrb2	exon	ENSMUSG00000007653	ProperStrand	248	chr5	143667366	143668359	protein_coding	Actb	utr5	ENSMUSG00000029580	ProperStrand	446	1	-6.4741
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr11	74649932	74650053	protein_coding	Mnt	exon	ENSMUSG00000000282	ProperStrand	56	1	-6.5056
chr2	160878343	160878416	protein_coding	Chd6	exon	ENSMUSG00000057133	ProperStrand	104	chr8	113366285	113366354	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	1	-8.0793
chr8	110105075	110105096	protein_coding	Psmd7	exon	ENSMUSG00000039067	ProperStrand	36	chr10	23505152	23505234	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.9992
chr1	43997431	43997480	protein_coding	Tpp2	intron	ENSMUSG00000041763	ProperStrand	22	chr18	33954817	33954908	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-5.4296
chr18	38156423	38156523	protein_coding	Arap3	exon	ENSMUSG00000024451	ProperStrand	3	chr3	123210856	123210923	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-8.0648
chr2	83629116	83629132	protein_coding	Itgav	exon	ENSMUSG00000027087	ProperStrand	59	chr19	8798502	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-5.2442
chr9	85637591	85637607	protein_coding	Ibtk	utr5	ENSMUSG00000035941	NonProperStrand	22	chr12	85350481	85350499	protein_coding	Acot1	utr5	ENSMUSG00000072949	ProperStrand	72	1	-14.9927
chr10	70690879	70690969	protein_coding	Tfam	utr3	ENSMUSG00000003923	ProperStrand	13	chr11	69481385	69481475	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-10.0984
chr2	167836656	167836680	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	1	-8.6958
chr13	107765486	107765502	protein_coding	Kif2a	exon	ENSMUSG00000021693	ProperStrand	32	chr11	98878371	98878456	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	2	-12.0983
chr7	151031403	151031457	protein_coding	Dhcr7	exon	ENSMUSG00000058454	ProperStrand	30	chr16	23111421	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.3326
chr7	7089290	7089306	protein_coding	Zfp773	exon	ENSMUSG00000063535	ProperStrand	16	chr4	131908295	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.6705
chr5	58949706	58949724	LINE	Lx5	L1	chr5Lx558949410	ProperStrand	14	chr7	29136525	29136575	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.0758
chr4	138846961	138847042	protein_coding	Capzb	utr3	ENSMUSG00000028745	ProperStrand	44	chr12	112779245	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-5.3783
chr4	150538028	150538044	protein_coding	Camta1	exon	ENSMUSG00000014592	ProperStrand	170	chr19	7016872	7016889	protein_coding	Bad	exon	ENSMUSG00000024959	ProperStrand	4	1	-16.9014
chr13	63612936	63612952	protein_coding	Ptch1	exon	ENSMUSG00000021466	NonProperStrand	118	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.8421
chr18	32125174	32125190	protein_coding	Myo7b	exon	ENSMUSG00000024388	NonProperStrand	2	chr17	8534500	8534517	protein_coding	Prr18	exon	ENSMUSG00000055945	NonProperStrand	4	1	-inf
chr5	129526802	129526856	protein_coding	Ran	exon	ENSMUSG00000029430	ProperStrand	82	chr11	79950546	79950563	protein_coding	1110002N22Rik	utr3	ENSMUSG00000046909	ProperStrand	45	1	-13.2655
chr19	53675016	53675033	protein_coding	Smc3	utr5	ENSMUSG00000024974	NonProperStrand	1	chr4	131866168	131866216	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-inf
chr3	32234350	32235965	protein_coding	Zmat3	utr3	ENSMUSG00000027663	ProperStrand	62	chr16	23110909	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-2.1998
chr3	100844499	100844555	protein_coding	Ptgfrn	utr3	ENSMUSG00000027864	ProperStrand	67	chr9	64023696	64023749	snoRNA	ENSMUSG00000064918_SNORD18	.	ENSMUSG00000064918	ProperStrand	370	3	-18.9430
chr14	121879890	121879919	protein_coding	Slc15a1	exon	ENSMUSG00000025557	ProperStrand	14	chr7	4843634	4843708	protein_coding	Isoc2a	exon	ENSMUSG00000086784	ProperStrand	5	1	-20.6519
chr11	86314375	86314442	protein_coding	Rps6kb1	utr3	ENSMUSG00000020516	ProperStrand	16	chr16	23110874	23110931	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.9771
chr3	22150292	22150365	misc_RNA	RNaseP_nuc	.	ENSMUSG00000087775	ProperStrand	5	chr9	64906101	64906124	protein_coding	Dpp8	intron	ENSMUSG00000032393	ProperStrand	31	4	-18.6946
chr9	65890984	65891084	protein_coding	Csnk1g1	utr3	ENSMUSG00000032384	ProperStrand	31	chr15	5068442	5068483	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-7.3812
chr4	6353608	6355626	protein_coding	Nsmaf	exon	ENSMUSG00000028245	ProperStrand	15	chr4	36643291	36643311	protein_coding	Lingo2	intron	ENSMUSG00000045083	ProperStrand	17	1	-19.0158
chr2	166890508	166890560	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	chr6	71832629	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-0.7557
chr15	81859705	81859754	protein_coding	Xrcc6	intron	ENSMUSG00000022471	ProperStrand	34	chr4	131866155	131866282	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	6	-18.7503
chr7	88186459	88186475	protein_coding	Zfp592	exon	ENSMUSG00000005621	NonProperStrand	32	chr11	117637642	117639595	protein_coding	Tmc6	exon	ENSMUSG00000025572	ProperStrand	60	1	-14.5843
chr15	78982035	78982051	protein_coding	Polr2f	exon	ENSMUSG00000033020	NonProperStrand	71	chr5	108336363	108336410	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-4.5573
chr8	72334599	72334615	protein_coding	Gmip	exon	ENSMUSG00000036246	ProperStrand	102	chr1	102076759	102076790	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	1	-8.3731
chr1	167391541	167391557	protein_coding	Brp44	exon	ENSMUSG00000026568	ProperStrand	6	chr11	77995190	77995236	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-10.9137
chr18	60712551	60712578	protein_coding	Dctn4	exon	ENSMUSG00000024603	ProperStrand	15	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	1	-9.8309
chr17	28023311	28023327	protein_coding	Uhrf1bp1	exon	ENSMUSG00000039512	NonProperStrand	14	chr2	26494708	26494763	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-9.7071
chr3	95059219	95059309	protein_coding	Prune	exon	ENSMUSG00000015711	ProperStrand	21	chr2	26493401	26493481	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-5.7727
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr11	62416575	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	4	-1.9424
chr3	85448965	85456213	protein_coding	Pet112l	exon	ENSMUSG00000028085	ProperStrand	81	chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	1	-10.0159
chr16	57391760	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr4	131890796	131891384	protein_coding	Rcc1	exon	ENSMUSG00000028896	ProperStrand	55	2	-12.7250
chr6	119952248	119952338	protein_coding	Wnk1	exon	ENSMUSG00000045962	ProperStrand	221	chr11	116938559	116938639	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-3.6575
chr5	144078268	144078356	protein_coding	Zdhhc4	exon	ENSMUSG00000001844	ProperStrand	6	chr1	181067485	181067503	protein_coding	Smyd3	intron	ENSMUSG00000055067	NonProperStrand	190	1	-15.7151
chr7	36090546	36090647	protein_coding	Gpatch1	intron	ENSMUSG00000063808	ProperStrand	6	chr11	48616641	48616706	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	1	-14.1016
chr9	123541402	123541418	protein_coding	Slc6a20b	exon	ENSMUSG00000025243	ProperStrand	16	chr2	129031342	129031410	protein_coding	Slc20a1	intron	ENSMUSG00000027397	ProperStrand	81	1	-15.3993
chr14	72301755	72301771	SINE	B4	B4	chr14B472301692	NonProperStrand	99	chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	1	-11.5602
chr18	73693110	73693135	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr5	115940292	115940406	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	1	-1.4579
chr13	112540780	112541440	protein_coding	Map3k1	exon	ENSMUSG00000021754	ProperStrand	113	chr15	96525735	96525916	protein_coding	Slc38a2	exon	ENSMUSG00000022462	ProperStrand	133	1	-10.4441
chr12	25731840	25731903	protein_coding	Kidins220	intron	ENSMUSG00000036333	ProperStrand	26	chr7	142843979	142843996	protein_coding	Ptpre	intron	ENSMUSG00000041836	ProperStrand	5	1	-19.8893
chr12	110888837	110899695	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr18	35716697	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	14	-6.7965
chr16	18240811	18240937	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	chr16	23110827	23110962	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	24	-1.8992
chr5	122433981	122434000	protein_coding	Cux2	intron	ENSMUSG00000042589	NonProperStrand	9	chr5	130300515	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-10.1381
chr9	65049532	65049622	snRNA	ENSMUSG00000075930_U5	.	ENSMUSG00000075930	ProperStrand	175	chr2	158205259	158205339	snoRNA	ENSMUSG00000064585_SNORA71	.	ENSMUSG00000064585	ProperStrand	418	1	-7.2902
chr5	111798403	111798459	protein_coding	Pitpnb	intron	ENSMUSG00000050017	ProperStrand	137	chr16	23111386	23111476	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-0.8382
chr18	74938038	74938149	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	ProperStrand	1022	chr18	74938195	74938338	snoRNA	ENSMUSG00000089235_SCARNA17	.	ENSMUSG00000089235	ProperStrand	1128	585	-20.1838
chr6	3794661	3794678	SINE	B4A	B4	chr6B4A3794525	NonProperStrand	26	chr12	106269368	106269445	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	2	-9.4368
chr2	163879733	163879749	protein_coding	Tomm34	utr3	ENSMUSG00000018322	NonProperStrand	18	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-11.3672
chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	chr14	33005038	33005138	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-0.7724
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr16	57391757	57391792	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	2	-0.7548
chr10	127560639	127560849	protein_coding	Baz2a	exon	ENSMUSG00000040054	ProperStrand	274	chr7	150717298	150717348	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-2.6738
chr9	88306339	88306362	protein_coding	Snx14	intron	ENSMUSG00000032422	ProperStrand	13	chr11	68886946	68887025	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	NonProperStrand	12	1	-20.5400
chr4	131866085	131866109	lincRNA	Snhg12	exon	ENSMUSG00000086290	ProperStrand	178	chr15	78982035	78982051	protein_coding	Polr2f	exon	ENSMUSG00000033020	NonProperStrand	71	1	-10.7930
chr11	64949314	64949335	protein_coding	Arhgap44	intron	ENSMUSG00000033389	NonProperStrand	30	chr4	131865867	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.9337
chr11	106920113	106920136	protein_coding	Bptf	exon	ENSMUSG00000040481	ProperStrand	70	chr12	17553061	17553090	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-4.7913
chr17	34404198	34404288	protein_coding-noncoding	H2-Ab1	utr5	ENSMUSG00000073421	NonProperStrand	1	chr17	34404478	34404558	protein_coding	H2-Ab1	exon	ENSMUSG00000073421	NonProperStrand	2	1	-inf
chr10	75998983	75999000	protein_coding	Lss	exon	ENSMUSG00000033105	ProperStrand	56	chr7	52382234	52382315	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-8.4217
chr19	10703569	10703645	protein_coding	Ddb1	utr3	ENSMUSG00000024740	ProperStrand	304	chr10	58276413	58276431	protein_coding	Sh3rf3	utr5	ENSMUSG00000037990	ProperStrand	18	1	-12.5052
chr2	120352763	120354088	protein_coding	Zfp106	exon	ENSMUSG00000027288	ProperStrand	199	chr16	5100103	5100119	protein_coding	Ppl	exon	ENSMUSG00000039457	ProperStrand	37	1	-11.8842
chr11	7067186	7069426	protein_coding	Adcy1	exon	ENSMUSG00000020431	ProperStrand	183	chrX	71517837	71517907	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-4.3784
chr2	69193622	69193678	LINE	L1Md_F2	L1	chr2L1Md_F269191897	ProperStrand	54	chr2	26494740	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.2978
chr2	57090809	57090827	protein_coding	Gpd2	utr5	ENSMUSG00000026827	ProperStrand	93	chr8	42074242	42074259	protein_coding	Pdgfrl	exon	ENSMUSG00000031595	NonProperStrand	4	1	-17.9274
chr5	135097872	135101273	protein_coding	Eif4h	exon	ENSMUSG00000040731	ProperStrand	46	chr16	23111469	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.6437
chr1	180181220	180181236	protein_coding	Pppde1	utr3	ENSMUSG00000026502	ProperStrand	27	chr12	110923174	110923229	snoRNA	ENSMUSG00000084487_SNORD113	.	ENSMUSG00000084487	ProperStrand	183	1	-12.6918
chr19	5364895	5364918	protein_coding	Banf1	utr3	ENSMUSG00000024844	ProperStrand	34	chr1	88423310	88423409	protein_coding	Ptma	utr5	ENSMUSG00000026238	ProperStrand	385	2	-16.8648
chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	chr14	33005039	33005093	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	2	-2.9036
chr14	55262920	55263020	protein_coding	Acin1	exon	ENSMUSG00000022185	ProperStrand	67	chr4	131908236	131908765	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.2634
chr8	112387973	112387989	antisense	Gm17344	.	ENSMUSG00000078143	NonProperStrand	100	chr14	15572352	15572371	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	1	-10.2574
chr8	101051320	101051336	LTR	RMER13B	ERVK	chr8RMER13B101050623	NonProperStrand	8	chr19	8799022	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-9.9334
chr5	120128746	120128818	protein_coding	Tbx3	exon	ENSMUSG00000018604	ProperStrand	87	chr5	130300421	130300511	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.8963
chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr17	62956666	62956683	protein_coding	Efna5	utr3	ENSMUSG00000048915	NonProperStrand	32	1	-7.7085
chr14	76920368	76920384	lincRNA	4930444M15Rik	exon	ENSMUSG00000085974	NonProperStrand	14	chr11	116713537	116713576	protein_coding	Srsf2	exon	ENSMUSG00000034120	ProperStrand	132	1	-14.6938
chr7	16527678	16528140	protein_coding	Gltscr2	exon	ENSMUSG00000041560	ProperStrand	127	chr1	162967512	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-2.1627
mmu-miR-292a-5p	4	21	miRNA	mmu-miR-292a-5p	.	mmu-miR-292a-5p	ProperStrand	20	chr11	6428038	6428138	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	6	-19.9182
chr9	64188760	64188782	protein_coding	Dis3l	utr5	ENSMUSG00000032396	ProperStrand	2	chr11	6519809	6519943	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-15.4342
chr13	65386274	65399470	protein_coding	Zfp369	exon	ENSMUSG00000021514	ProperStrand	11	chr4	131908687	131908725	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-17.9906
chr3	144748059	144749264	protein_coding	Clca5	exon	ENSMUSG00000036960	ProperStrand	86	chr2	32818884	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	2	-7.8953
chrX	149933937	149934037	protein_coding	Ubqln2	exon	ENSMUSG00000050148	ProperStrand	12	chr9	64143801	64143877	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-11.0458
chr4	44330921	44330946	protein_coding	Melk	exon	ENSMUSG00000035683	ProperStrand	58	chr1	90162159	90162205	protein_coding	Hjurp	exon	ENSMUSG00000044783	ProperStrand	110	1	-12.1653
chr16	33002050	33002109	rRNA	n-R5s33	.	ENSMUSG00000070225	ProperStrand	2	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-12.6096
chr1	184420998	184421088	protein_coding	Capn2	exon	ENSMUSG00000026509	ProperStrand	6	chr10	23505152	23505232	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-5.3874
chr6	142441066	142441114	protein_coding	Ldhb	exon	ENSMUSG00000030246	ProperStrand	224	chr19	56454889	56454907	protein_coding	Nrap	intron	ENSMUSG00000049134	ProperStrand	32	1	-11.9416
chr17	13115655	13115785	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	2	-1.7612
chr2	90235292	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr12	56970338	56970371	protein_coding	Brms1l	utr3	ENSMUSG00000012076	ProperStrand	9	1	-8.2671
chr1	45488603	45488620	protein_coding	Col5a2	intron	ENSMUSG00000026042	ProperStrand	184	chr8	73419732	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-1.3087
chr4	131825993	131826059	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	chr1	145626088	145626178	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	2	-7.9253
chr15	82980135	82980225	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr3	88497866	88497946	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-1.7270
chr4	123411023	123411041	Other	RMER1B	Other	chr4RMER1B123410031	ProperStrand	1	chr2	130103751	130103781	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-inf
chr12	110888838	110888915	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr7	118219574	118219609	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-1.1983
chr11	69549037	69549200	protein_coding	Polr2a	exon	ENSMUSG00000005198	ProperStrand	200	chr7	52382603	52382914	protein_coding	Rpl13a	exon	ENSMUSG00000074129	ProperStrand	269	1	-7.8988
chr18	35112057	35112100	protein_coding	Hspa9	exon	ENSMUSG00000024359	ProperStrand	166	chr11	69481335	69481433	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-1.5112
chr8	41570003	41570019	protein_coding	Zdhhc2	utr3	ENSMUSG00000039470	NonProperStrand	85	chr11	77995191	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-5.4994
chr16	33290255	33291890	protein_coding	Snx4	exon	ENSMUSG00000022808	ProperStrand	25	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-9.9447
chr2	79132657	79132674	protein_coding-noncoding	Itga4	utr5	ENSMUSG00000027009	NonProperStrand	118	chr11	70067503	70067520	protein_coding	Alox12	intron	ENSMUSG00000000320	ProperStrand	16	1	-14.6439
chr5	28684853	28684943	protein_coding	Rbm33	exon	ENSMUSG00000048271	ProperStrand	78	chr5	130295432	130295513	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	19	-inf
chr15	77597977	77597993	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr19	8799829	8799877	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-1.0982
chr17	56208610	56208661	protein_coding	Ubxn6	exon	ENSMUSG00000019578	ProperStrand	10	chr5	130300420	130300510	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	7	-21.1940
chr7	13614020	13614110	protein_coding	Trim28	exon	ENSMUSG00000005566	ProperStrand	296	chr7	54110511	54110550	protein_coding	Ldha	utr3	ENSMUSG00000063229	ProperStrand	280	1	-7.0426
chr15	85694557	85699239	protein_coding	Gtse1	exon	ENSMUSG00000022385	ProperStrand	74	chr18	35714166	35714268	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-5.2820
chr8	122477235	122478741	protein_coding	Usp10	exon	ENSMUSG00000031826	ProperStrand	98	chr4	131908232	131908318	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.7866
chr8	44381012	44381069	protein_coding	Zfp42	exon	ENSMUSG00000051176	NonProperStrand	5	chr17	39985297	39985347	pseudogene	AY036118	.	ENSMUSG00000045999	ProperStrand	57	1	-17.9753
chr7	36624700	36624716	LTR	ORR1D1	MaLR	chr7ORR1D136624516	NonProperStrand	6	chr5	121655105	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-8.3778
chr18	34767680	34769491	protein_coding	Brd8	exon	ENSMUSG00000003778	ProperStrand	27	chr11	97642952	97643041	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.9172
chr1	134346408	134346527	protein_coding	Dstyk	exon	ENSMUSG00000042046	ProperStrand	11	chr5	130295522	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-8.6618
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr2	170337006	170337022	protein_coding	Pfdn4	utr5	ENSMUSG00000052033	ProperStrand	55	1	-11.5454
chr11	76542935	76543032	protein_coding	Gosr1	utr3	ENSMUSG00000010392	ProperStrand	9	chr3	123210850	123210906	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.6210
chr11	100376398	100377291	protein_coding	Acly	exon	ENSMUSG00000020917	ProperStrand	183	chr7	137689455	137690554	protein_coding	Nsmce4a	exon	ENSMUSG00000040331	ProperStrand	14	4	-inf
chr6	83318070	83318086	protein_coding	Tet3	exon	ENSMUSG00000034832	NonProperStrand	93	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-8.0502
chr18	56735615	56739836	protein_coding	Phax	exon	ENSMUSG00000008301	ProperStrand	22	chr19	55173833	55173913	protein_coding	Gpam	utr5	ENSMUSG00000024978	ProperStrand	19	1	-17.5479
chr2	168426891	168426911	protein_coding	Nfatc2	intron	ENSMUSG00000027544	NonProperStrand	49	chr7	29136525	29136646	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.7131
chr18	83171294	83171351	protein_coding	Zfp516	utr3	ENSMUSG00000058881	ProperStrand	25	chr8	32260356	32260423	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	2	-10.3212
chr3	153575089	153575168	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	chr5	102311977	102313118	protein_coding	Wdfy3	utr3	ENSMUSG00000043940	ProperStrand	45	1	-9.0729
chr1	116646498	116646515	SINE	B3	B2	chr1B3116646366	ProperStrand	1	chr11	68620702	68620756	protein_coding	Myh10	exon	ENSMUSG00000020900	ProperStrand	91	1	-inf
chr11	35793708	35793798	protein_coding	Wwc1	utr5	ENSMUSG00000018849	ProperStrand	52	chr11	85364317	85364397	protein_coding	Bcas3	intron	ENSMUSG00000059439	ProperStrand	20	1	-15.8174
chr5	121656795	121658416	protein_coding	Rpl6	exon	ENSMUSG00000029614	ProperStrand	332	chr4	131866169	131866249	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-0.9244
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr11	60371554	60371586	protein_coding	Alkbh5	utr3	ENSMUSG00000042650	ProperStrand	203	1	-2.6984
chr5	149204771	149204791	protein_coding	Slc7a1	intron	ENSMUSG00000041313	NonProperStrand	4	chr11	6428077	6428154	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-8.6824
chr16	48630822	48630845	protein_coding	Morc1	exon	ENSMUSG00000022652	ProperStrand	28	chr4	131908341	131908431	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-9.5863
chr19	7345970	7346001	protein_coding	Rcor2	exon	ENSMUSG00000024968	ProperStrand	120	chr9	120038496	120038550	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-3.4003
chr18	35733170	35733233	protein_coding	Matr3	intron	ENSMUSG00000037236	ProperStrand	90	chr5	121655133	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.0079
chr11	21040584	21040600	protein_coding	Peli1	exon	ENSMUSG00000020134	ProperStrand	69	chr7	52234787	52234846	protein_coding	Prmt1	exon	ENSMUSG00000052429	ProperStrand	21	1	-15.1495
chr12	114149925	114149989	protein_coding	Jag2	exon	ENSMUSG00000002799	ProperStrand	28	chr1	153257937	153257955	protein_coding	1200016B10Rik	exon	ENSMUSG00000052748	NonProperStrand	2	1	-inf
chr1	75212064	75212142	protein_coding	Tuba4a	utr3	ENSMUSG00000026202	ProperStrand	20	chr12	88778676	88778766	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	8	-inf
chr10	80030049	80030129	protein_coding	Klf16	utr3	ENSMUSG00000035397	ProperStrand	5	chr8	81029372	81029464	protein_coding	Rbmxl1	utr3	ENSMUSG00000037070	ProperStrand	13	1	-19.9979
chr4	116826701	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	chr11	106362554	106362617	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-1.4174
chr5	75109108	75109185	lincRNA	Gm15984	intron	ENSMUSG00000085657	ProperStrand	1	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-inf
chr15	82980135	82980224	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr11	98878341	98878375	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-0.9087
chrX	47726910	47726926	pseudogene	Gm14612	.	ENSMUSG00000082660	NonProperStrand	1	chr11	51551280	51551331	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	1	-inf
chr3	108228259	108228275	protein_coding	Sars	utr3	ENSMUSG00000068739	NonProperStrand	200	chr2	158182180	158182203	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-2.7678
chr8	108160509	108167425	protein_coding	Ctcf	utr5	ENSMUSG00000005698	ProperStrand	75	chrX	71589886	71589906	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	1	-9.7005
chr7	136800631	136800649	SINE	RSINE1	B4	chr7RSINE1136800606	ProperStrand	216	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-6.0527
chr17	88081987	88082005	protein_coding	Msh2	exon	ENSMUSG00000024151	ProperStrand	124	chr9	96020103	96020120	protein_coding	Gk5	intron	ENSMUSG00000041440	NonProperStrand	4	1	-17.5629
chr11	78325786	78325843	protein_coding	Poldip2	utr5	ENSMUSG00000001100	ProperStrand	10	chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	1	-12.8501
chr12	81964302	81964360	protein_coding	4933426M11Rik	intron	ENSMUSG00000021133	ProperStrand	23	chr16	23110986	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.4133
chr4	85016349	85016365	protein_coding	Sh3gl2	intron	ENSMUSG00000028488	NonProperStrand	313	chr8	97388730	97388774	protein_coding	Dok4	utr3	ENSMUSG00000040631	ProperStrand	3	1	-16.4133
chr15	76735367	76735387	protein_coding	Rpl8	exon	ENSMUSG00000003970	ProperStrand	191	chr9	15118323	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-1.5206
chr6	94090896	94090975	protein_coding	Magi1	intron	ENSMUSG00000045095	ProperStrand	106	chr16	23111770	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-2.1141
chr18	31806820	31806877	protein_coding	Sap130	exon	ENSMUSG00000024260	ProperStrand	32	chr7	134939735	134939790	protein_coding	Setd1a	exon	ENSMUSG00000042308	ProperStrand	58	2	-20.2351
chr13	5834481	5834571	LINE	L1MA6	L1	chr13L1MA65834498	ProperStrand	1	chr13	5834759	5834839	LTR	MERVL_2A-int	ERVL	chr13MERVL_2A-int5834577	ProperStrand	1	1	-inf
chr14	57204539	57204555	protein_coding	Parp4	exon	ENSMUSG00000054509	NonProperStrand	113	chr19	8800377	8800421	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-2.4077
chr17	17710939	17710956	protein_coding	Lnpep	exon	ENSMUSG00000023845	ProperStrand	23	chr15	79749427	79749496	protein_coding	Cbx7	exon	ENSMUSG00000053411	ProperStrand	62	1	-15.2002
chr15	102455433	102455450	protein_coding	Atf7	intron	ENSMUSG00000052414	ProperStrand	14	chr4	116828379	116828452	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-11.3395
chr7	29171541	29171558	protein_coding	Med29	utr3	ENSMUSG00000003444	NonProperStrand	134	chr9	15119287	15119377	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	6	-18.3808
chr1	183766299	183766336	protein_coding	Lbr	exon	ENSMUSG00000004880	ProperStrand	97	chr19	11271200	11271217	protein_coding	Ms4a13	utr5	ENSMUSG00000057240	ProperStrand	59	1	-12.3824
chr9	70960076	70960092	protein_coding	Aqp9	exon	ENSMUSG00000032204	NonProperStrand	118	chr19	8799847	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-3.6653
chr17	35971145	35971211	protein_coding	Tubb5	utr3	ENSMUSG00000001525	ProperStrand	624	chr11	116533862	116533893	snoRNA	ENSMUSG00000065640_Snord1c	.	ENSMUSG00000065640	ProperStrand	373	3	-11.7965
chr18	75053204	75053221	SINE	PB1D9	Alu	chr18PB1D975053162	NonProperStrand	1	chr4	3762155	3762359	protein_coding	Rps20	exon	ENSMUSG00000028234	ProperStrand	71	1	-inf
chr11	87172190	87172206	protein_coding	Ppm1e	exon	ENSMUSG00000046442	ProperStrand	112	chr7	116663633	116663712	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-2.8307
chr6	51419200	51419300	protein_coding	Hnrnpa2b1	intron	ENSMUSG00000004980	ProperStrand	166	chr9	15119350	15119397	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-3.1958
chr13	94136589	94136622	protein_coding	Homer1	utr3	ENSMUSG00000007617	ProperStrand	4	chr12	30684759	30684775	protein_coding	Pxdn	exon	ENSMUSG00000020674	NonProperStrand	16	1	-21.9369
chr7	52958453	52958469	protein_coding	Car11	exon	ENSMUSG00000003273	NonProperStrand	250	chr17	47928467	47928485	protein_coding	Tfeb	exon	ENSMUSG00000023990	ProperStrand	78	1	-9.9250
chr4	125390709	125390799	protein_coding	Grik3	utr3	ENSMUSG00000001985	ProperStrand	126	chr9	15119718	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.4418
chr2	147009105	147009122	protein_coding	Nkx2-2	utr3	ENSMUSG00000027434	NonProperStrand	84	chr10	23505259	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-0.8109
chr15	69413966	69414046	LINE	L1M2	L1	chr15L1M269413809	ProperStrand	1	chr10	28400633	28400723	protein_coding	Themis	intron	ENSMUSG00000049109	NonProperStrand	2	1	-inf
chr14	51429886	51431466	protein_coding	Parp2	exon	ENSMUSG00000036023	ProperStrand	50	chr4	131908715	131908795	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.4812
chr14	57253524	57253614	protein_coding	Parp4	intron	ENSMUSG00000054509	NonProperStrand	113	chr14	11245269	11245349	protein_coding	Fhit	intron	ENSMUSG00000060579	ProperStrand	32	1	-13.3145
chr14	33156464	33156492	protein_coding	Ogdhl	exon	ENSMUSG00000021913	ProperStrand	182	chr2	121189551	121189571	protein_coding	Strc	utr3	ENSMUSG00000033498	NonProperStrand	11	1	-14.5433
chr18	63109676	63109692	protein_coding	Apcdd1	exon	ENSMUSG00000071847	NonProperStrand	254	chr11	106362303	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-3.1105
chr6	30162058	30162074	protein_coding	Ube2h	utr3	ENSMUSG00000039159	ProperStrand	96	chr4	138991052	138991071	protein_coding	Ubr4	exon	ENSMUSG00000066036	ProperStrand	304	1	-9.1188
chr8	125793004	125793094	protein_coding	Zfp276	utr3	ENSMUSG00000001065	ProperStrand	6	chr4	131908709	131908789	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.3738
chr15	98604924	98606960	protein_coding	Wnt10b	exon	ENSMUSG00000022996	NonProperStrand	189	chr7	29136528	29136580	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-0.7287
chr19	35158702	35158720	LTR	MLT1F1	MaLR	chr19MLT1F135158462	ProperStrand	1	chr19	9042319	9042370	protein_coding	Eef1g	intron	ENSMUSG00000071644	ProperStrand	410	1	-inf
chr18	38050292	38050382	protein_coding	Diap1	exon	ENSMUSG00000024456	ProperStrand	77	chr3	123210904	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.6735
chr8	86535304	86535320	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	chr9	15118245	15118322	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-1.8571
chr11	85051007	85051553	antisense	D630032N06Rik	.	ENSMUSG00000085628	ProperStrand	1	chr11	106362589	106362635	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-inf
chr17	35295978	35296068	protein_coding	Prrc2a	exon	ENSMUSG00000024393	ProperStrand	315	chr4	131865411	131865491	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-1.2238
chr4	153410349	153410365	protein_coding	Ccdc27	exon	ENSMUSG00000039492	ProperStrand	94	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-6.3447
chr10	109988872	109988889	LTR	RMER13A	ERVK	chr10RMER13A109988484	ProperStrand	15	chr17	35087944	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-7.9703
chr2	129998643	129998719	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chrX	71589890	71589907	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	2	-8.2313
chr6	134780323	134780339	protein_coding	Crebl2	utr5	ENSMUSG00000032652	ProperStrand	41	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	2	-15.3387
chr9	46089581	46090290	protein_coding	Zfp259	utr3	ENSMUSG00000032078	ProperStrand	9	chr5	130300417	130300517	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	4	-19.4403
chr11	6519810	6519945	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	chr16	23110455	23110584	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	7	-0.8647
chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	chr17	27559700	27559717	protein_coding	Grm4	utr3	ENSMUSG00000063239	ProperStrand	147	1	-7.9657
chr8	87370632	87370673	protein_coding	Calr	exon	ENSMUSG00000003814	ProperStrand	232	chr2	91780448	91780479	protein_coding	Dgkz	exon	ENSMUSG00000040479	ProperStrand	46	1	-11.1370
chr10	75322118	75322227	protein_coding	Mif	utr3	ENSMUSG00000033307	ProperStrand	146	chr11	97642952	97643084	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	5	-6.6746
chr3	65183847	65183865	protein_coding	Ssr3	utr3	ENSMUSG00000027828	ProperStrand	24	chr4	131908236	131908339	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.9196
chr16	33430319	33430340	protein_coding	Zfp148	intron	ENSMUSG00000022811	NonProperStrand	15	chr2	173403777	173403800	protein_coding	Ankrd60	utr5	ENSMUSG00000027517	ProperStrand	5	1	-20.3414
chr2	133806896	133806916	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr4	81022084	81022102	protein_coding	Mpdz	intron	ENSMUSG00000028402	ProperStrand	21	1	-15.2659
chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-1.2456
chr4	116284476	116284576	protein_coding-noncoding	Nasp	utr3	ENSMUSG00000028693	ProperStrand	8	chr7	117190000	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-7.3098
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr8	113362433	113362478	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	1	-4.6199
chr5	92483213	92483253	protein_coding	G3bp2	utr3	ENSMUSG00000029405	ProperStrand	78	chr15	98356821	98356858	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	1	-7.2311
chr1	190795267	190795343	protein_coding	Kctd3	utr3	ENSMUSG00000026608	ProperStrand	28	chrX	163746730	163746747	protein_coding	Tlr7	utr5	ENSMUSG00000044583	NonProperStrand	3	1	-inf
chr7	52382234	52382315	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	chr5	108334196	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	5	-4.9681
chr17	25140268	25140324	protein_coding	Cramp1l	exon	ENSMUSG00000038002	ProperStrand	22	chr1	89681231	89681321	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-7.4365
chr9	58500204	58500267	protein_coding	Nptn	utr3	ENSMUSG00000032336	ProperStrand	25	chr12	106269349	106269439	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	9	-19.1375
chr9	51894767	51894867	protein_coding	Rdx	utr3	ENSMUSG00000032050	ProperStrand	60	chrX	34622906	34622922	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-3.1711
chr10	107800765	107800865	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	chr7	86611351	86611379	tRNA	tRNA387-ArgTCG	.	1117870	ProperStrand	77	1	-7.5727
chr8	91487251	91487268	SINE	B4	B4	chr8B491487097	ProperStrand	18	chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-8.8757
chr17	89408214	89408230	protein_coding	Fshr	intron	ENSMUSG00000032937	NonProperStrand	29	chr3	123210927	123210977	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.3336
chr11	5430085	5430129	protein_coding	Ccdc117	utr3	ENSMUSG00000020482	ProperStrand	13	chr12	71146391	71146407	protein_coding	Nin	exon	ENSMUSG00000021068	ProperStrand	95	1	-15.5082
chr17	71601856	71601872	lincRNA	Gm16724	intron	ENSMUSG00000085916	ProperStrand	13	chr12	112779147	112779210	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-7.8270
chr12	84937906	84937925	protein_coding	Zfyve1	intron	ENSMUSG00000042628	NonProperStrand	4	chr19	8798754	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-10.4043
chr5	110715373	110715390	protein_coding	Pole	utr5	ENSMUSG00000007080	ProperStrand	125	chr5	121655099	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.4364
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr17	25996060	25996076	protein_coding	Wdr90	exon	ENSMUSG00000073434	ProperStrand	91	1	-5.0909
chr7	25669886	25670172	protein_coding	Rps19	exon	ENSMUSG00000040952	NonProperStrand	1	chr7	118219572	118219671	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	NonProperStrand	8	1	-inf
chr16	21222868	21222919	protein_coding	Ephb3	utr3	ENSMUSG00000005958	ProperStrand	23	chr1	162966207	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-9.5080
chr9	65742442	65742522	protein_coding-noncoding	Trip4	utr3	ENSMUSG00000032386	ProperStrand	1	chr9	65528964	65529054	pseudogene	Oaz2	.	ENSMUSG00000040652	ProperStrand	3	1	-inf
chr7	52378903	52379701	protein_coding	Rps11	utr5	ENSMUSG00000003429	ProperStrand	49	chr12	88778627	88778722	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-6.8997
chr5	74489202	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr7	52382233	52382315	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	8	-13.0371
chr6	54593671	54593761	protein_coding	Plekha8	utr3	ENSMUSG00000005225	ProperStrand	21	chr9	78327324	78327437	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-8.4394
chr4	116883464	116883564	snRNA	ENSMUSG00000070237_U5	.	ENSMUSG00000070237	ProperStrand	154	chr16	23111734	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	9	-11.2851
chr11	69652955	69652980	protein_coding	1810027O10Rik	exon	ENSMUSG00000070394	ProperStrand	2	chr4	131866159	131866286	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-10.9862
chr17	13115652	13115784	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	chr7	116664794	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	11	-1.9919
chr7	30026273	30026289	protein_coding	Yif1b	intron	ENSMUSG00000030588	ProperStrand	154	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-3.1070
chrX	18517529	18517555	LINE	L1MC4	L1	chrXL1MC418517464	ProperStrand	1	chr4	131908236	131908276	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-inf
chr11	115429703	115431027	protein_coding	Nup85	exon	ENSMUSG00000020739	ProperStrand	33	chr3	123210854	123210889	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-5.3607
chr5	31378392	31378466	protein_coding	Cad	exon	ENSMUSG00000013629	ProperStrand	260	chr1	84740460	84740485	protein_coding	Trip12	exon	ENSMUSG00000026219	ProperStrand	248	1	-7.5394
chr6	41379035	41379115	LINE	L1Md_F2	L1	chr6L1Md_F241375365	ProperStrand	1	chr7	54443721	54443811	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-inf
chr5	24049307	24049407	protein_coding	4931409K22Rik	utr3	ENSMUSG00000038199	ProperStrand	1	chr11	62416580	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-inf
chr14	32986593	32986657	protein_coding	Ncoa4	exon	ENSMUSG00000056234	ProperStrand	15	chr11	97642999	97643089	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-5.0602
chr18	61715448	61715495	protein_coding	Csnk1a1	exon	ENSMUSG00000024576	ProperStrand	64	chr11	69481379	69481464	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.0842
mmu-miR-690	3	22	miRNA	mmu-miR-690	.	mmu-miR-690	ProperStrand	63	chr5	130300460	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-6.4504
chr14	56389352	56390228	protein_coding	Adcy4	exon	ENSMUSG00000022220	ProperStrand	29	chr17	39985306	39985354	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-7.3787
chr4	126699076	126699176	protein_coding	Sfpq	exon	ENSMUSG00000028820	ProperStrand	340	chr1	172975166	172975189	tRNA	tRNA699-GlyGCC	.	495543	ProperStrand	660	3	-11.9410
chr18	38892589	38892607	protein_coding	Arhgap26	intron	ENSMUSG00000036452	ProperStrand	46	chr5	121655017	121655129	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.2480
chr7	112782969	112782985	protein_coding	Arfip2	utr3	ENSMUSG00000030881	ProperStrand	191	chr11	106362304	106362378	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-3.6281
chr1	141376132	141376197	protein_coding	Aspm	exon	ENSMUSG00000033952	ProperStrand	64	chr1	108769440	108769458	protein_coding	Serpinb5	intron	ENSMUSG00000067006	ProperStrand	2	1	-inf
chr11	62416951	62417020	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	chr13	21356482	21356523	tRNA	tRNA72-ThrCGT	.	648982	ProperStrand	3	1	-12.3794
chr11	70223299	70223399	protein_coding	Pelp1	exon	ENSMUSG00000018921	ProperStrand	64	chr7	117189862	117189931	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-6.0821
chr2	179913970	179914002	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr12	99497602	99497618	protein_coding	Galc	utr5	ENSMUSG00000021003	NonProperStrand	65	1	-9.5356
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr19	8963028	8963178	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	16	-14.2589
chrX	7702601	7702701	protein_coding	Wdr13	utr3	ENSMUSG00000031166	ProperStrand	8	chr2	26493366	26493442	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-7.7535
chr7	48982043	48982060	processed_transcript	Vmn2r-ps54	.	ENSMUSG00000074164	NonProperStrand	19	chr17	56755831	56755861	protein_coding	Lonp1	exon	ENSMUSG00000041168	ProperStrand	83	1	-14.9976
chr2	90235299	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	4829478	4829558	protein_coding	Lypla1	exon	ENSMUSG00000025903	ProperStrand	12	1	-7.6663
chr5	77343654	77343698	protein_coding	Ppat	utr3	ENSMUSG00000029246	ProperStrand	55	chr4	131908265	131908355	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	6	-10.6238
chr11	69549482	69549683	protein_coding	Polr2a	exon	ENSMUSG00000005198	ProperStrand	200	chr15	81877947	81877990	protein_coding	Nhp2l1	utr5	ENSMUSG00000063480	ProperStrand	40	1	-11.7166
chr12	107926049	107926065	lincRNA	4933406K04Rik	intron	ENSMUSG00000085820	ProperStrand	1	chr11	6428077	6428154	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-inf
chr8	113043417	113043434	protein_coding	Hydin	intron	ENSMUSG00000059854	ProperStrand	47	chr9	120039533	120039567	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.7695
chr1	169777993	169778011	protein_coding	Lmx1a	utr3	ENSMUSG00000026686	NonProperStrand	7	chr11	106362638	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-11.8178
chr1	162968213	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	chr2	158182180	158182280	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	3	-0.9480
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr5	113919913	113919930	protein_coding	Wscd2	utr5	ENSMUSG00000085571	NonProperStrand	40	1	-8.6081
chr7	148375337	148375427	protein_coding	Hras1	utr3	ENSMUSG00000025499	ProperStrand	17	chr18	33954816	33954896	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-5.9445
chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr13	51743567	51743703	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	3	-2.7974
chr1	20769531	20769548	protein_coding	Il17f	exon	ENSMUSG00000041872	NonProperStrand	2	chr11	77995189	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-13.6212
chr1	14908903	14908919	protein_coding	Trpa1	utr5	ENSMUSG00000032769	ProperStrand	24	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-10.0279
chr2	90235292	90235325	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	127521240	127521269	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	1	-0.7837
chr10	51954191	51954228	protein_coding	Dcbld1	intron	ENSMUSG00000019891	ProperStrand	21	chr19	8798776	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	2	-11.1274
chr1	137429091	137429112	protein_coding	Nav1	exon	ENSMUSG00000009418	ProperStrand	38	chr1	55064373	55064473	protein_coding	Sf3b1	exon	ENSMUSG00000025982	ProperStrand	158	1	-12.2920
chr3	14647668	14647719	protein_coding	Car13	intron	ENSMUSG00000027555	ProperStrand	4	chr11	48614392	48614435	snoRNA	ENSMUSG00000064500_SNORD95	.	ENSMUSG00000064500	ProperStrand	100	1	-17.8796
chrX	107396011	107396027	LTR	RMER17A	ERVK	chrXRMER17A107395334	NonProperStrand	27	chr9	50816824	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	1	-13.4261
chr11	54304387	54304404	protein_coding	Fnip1	exon	ENSMUSG00000035992	ProperStrand	16	chr2	158185620	158185653	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-9.1496
chr16	64770795	64770813	protein_coding	4930453N24Rik	utr5	ENSMUSG00000059920	ProperStrand	39	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-6.0455
chr8	113660848	113660911	protein_coding	Pdpr	utr3	ENSMUSG00000033624	ProperStrand	49	chr4	131866160	131866250	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-4.0443
chr13	113278770	113278853	protein_coding	Il6st	exon	ENSMUSG00000021756	ProperStrand	34	chr19	8798490	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-6.3293
chr4	141133091	141133171	protein_coding	Fblim1	utr3	ENSMUSG00000006219	ProperStrand	26	chr8	3604209	3604299	protein_coding	Camsap3	exon	ENSMUSG00000044433	ProperStrand	86	1	-14.2829
chr4	98674472	98674546	protein_coding	Dock7	intron	ENSMUSG00000028556	ProperStrand	20	chr16	23111394	23111484	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-7.9098
chr2	26493366	26493449	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr1	59748830	59748856	snoRNA	ENSMUSG00000077345_Snord70	.	ENSMUSG00000077345	ProperStrand	61	3	-9.1547
chr19	42169145	42169235	protein_coding	Pi4k2a	intron	ENSMUSG00000025178	ProperStrand	23	chr5	108334196	108334276	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-6.7107
chr14	61382516	61382548	protein_coding	Spata13	utr3	ENSMUSG00000021990	ProperStrand	28	chr3	113827103	113827119	protein_coding	Col11a1	utr3	ENSMUSG00000027966	NonProperStrand	139	1	-13.1661
chr6	131330325	131330405	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	ProperStrand	408	chr14	76372286	76372376	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	1	-5.2039
chr8	114253540	114253596	protein_coding	Bcar1	intron	ENSMUSG00000031955	ProperStrand	44	chr17	35089184	35089205	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	2	-9.9122
chr15	8063557	8063641	protein_coding	Nup155	intron	ENSMUSG00000022142	ProperStrand	91	chr2	26493366	26493391	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-2.9834
chr5	72914801	72914828	protein_coding	Nfxl1	exon	ENSMUSG00000072889	ProperStrand	17	chr11	55296295	55296334	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-8.7145
chr1	187235085	187235151	protein_coding	Eprs	exon	ENSMUSG00000026615	ProperStrand	149	chr9	15119713	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.2081
chr10	80363483	80363528	protein_coding	Timm13	utr5	ENSMUSG00000020219	ProperStrand	7	chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	1	-13.3277
chr7	29171541	29171558	protein_coding	Med29	utr3	ENSMUSG00000003444	NonProperStrand	134	chr9	120037981	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-3.2041
chr5	88096284	88096300	protein_coding	Csn1s1	exon	ENSMUSG00000070702	NonProperStrand	19	chr16	23110915	23110938	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7016
chr6	71390421	71390437	protein_coding	Rmnd5a	utr5	ENSMUSG00000002222	ProperStrand	38	chr7	38746652	38746685	protein_coding	C80913	exon	ENSMUSG00000030421	ProperStrand	25	1	-15.9952
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr8	40681587	40681603	protein_coding	Msr1	intron	ENSMUSG00000025044	ProperStrand	138	1	-9.6992
chr13	45662409	45662439	protein_coding	Atxn1	exon	ENSMUSG00000046876	ProperStrand	28	chr19	8963084	8963174	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.6314
chr9	64026189	64026277	protein_coding	Rpl4	utr3	ENSMUSG00000032399	ProperStrand	608	chr4	116826700	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-2.4248
chr19	5843017	5843073	non_coding	Neat1	.	ENSMUSG00000092274	ProperStrand	63	chr5	111121107	111121197	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	11	-22.3865
chr15	36528062	36528751	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr4	131865467	131865520	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	3	-0.9705
chr6	100182291	100182391	protein_coding	Rybp	exon	ENSMUSG00000072872	ProperStrand	51	chr9	120038616	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.3330
chr6	71824801	71824901	protein_coding	Immt	exon	ENSMUSG00000052337	ProperStrand	48	chr1	162965538	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.6869
chr11	119141978	119142426	protein_coding	Gaa	intron	ENSMUSG00000025579	ProperStrand	149	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-3.1883
chr17	56575109	56575171	protein_coding	Ptprs	exon	ENSMUSG00000013236	ProperStrand	152	chr11	69481333	69481422	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	4	-6.5713
chr8	123641901	123641918	protein_coding	Foxc2	exon	ENSMUSG00000046714	ProperStrand	1	chr1	162965980	162965999	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-inf
chr2	72094560	72094578	protein_coding	Rapgef4	utr3	ENSMUSG00000049044	NonProperStrand	11	chr18	33954819	33954891	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-6.8319
chr8	11448648	11448748	protein_coding	Col4a2	utr3	ENSMUSG00000031503	ProperStrand	74	chr1	162967495	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-3.0934
chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	chr9	41932026	41932102	protein_coding	Sorl1	exon	ENSMUSG00000049313	ProperStrand	112	1	-8.2399
chr5	137441816	137441916	protein_coding	Fis1	utr3	ENSMUSG00000019054	ProperStrand	12	chr12	55796767	55796784	protein_coding	Eapp	utr5	ENSMUSG00000054302	NonProperStrand	62	1	-16.5329
chr15	78939631	78939647	protein_coding	Micall1	utr5	ENSMUSG00000033039	ProperStrand	48	chr10	63070812	63070829	protein_coding	Ctnna3	intron	ENSMUSG00000060843	ProperStrand	66	1	-13.5728
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chrX	130963012	130965025	protein_coding	Drp2	exon	ENSMUSG00000000223	NonProperStrand	12	1	-11.0688
chr10	82107412	82110004	protein_coding	Tdg	exon	ENSMUSG00000034674	ProperStrand	42	chr10	41774164	41774254	pseudogene	Gm9855	.	ENSMUSG00000085666	ProperStrand	2	2	-inf
chr12	80276976	80276993	protein_coding	Rdh11	utr3	ENSMUSG00000066441	NonProperStrand	23	chr16	23110454	23110538	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.2122
chr2	119430526	119430594	lincRNA	1700020I14Rik	exon	ENSMUSG00000085438	ProperStrand	15	chr1	145626061	145626126	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	4	-inf
chr17	28745650	28758952	protein_coding	Srpk1	exon	ENSMUSG00000004865	ProperStrand	61	chr10	110918548	110918628	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-3.4184
chrX	96337150	96337169	protein_coding	Efnb1	intron	ENSMUSG00000031217	NonProperStrand	2	chr18	35716763	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-9.2832
chr2	167340823	167340892	protein_coding	Rnf114	utr3	ENSMUSG00000006418	ProperStrand	18	chr4	116826700	116826765	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	5	-19.2757
chr17	24858024	24858054	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr1	72290861	72290975	snRNA	ENSMUSG00000093111_AC120136.1	.	ENSMUSG00000093111	ProperStrand	137	3	-17.6536
chr10	75322917	75322960	protein_coding	Mif	utr5	ENSMUSG00000033307	ProperStrand	146	chr10	23505559	23505600	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-5.7930
chr2	27391385	27391485	protein_coding	Wdr5	utr3	ENSMUSG00000026917	ProperStrand	81	chr4	130310086	130318695	protein_coding	Pum1	exon	ENSMUSG00000028580	ProperStrand	131	1	-11.1422
chr11	51640158	51641848	protein_coding	Phf15	exon	ENSMUSG00000020387	ProperStrand	4	chr15	36701729	36701746	protein_coding	Ywhaz	utr3	ENSMUSG00000022285	ProperStrand	73	1	-18.5123
chr4	133560084	133560102	protein_coding	Lin28a	utr3	ENSMUSG00000050966	ProperStrand	55	chr16	23111394	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-2.6254
chr4	55036432	55063101	protein_coding	Zfp462	exon	ENSMUSG00000060206	ProperStrand	37	chr5	121655024	121655104	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.6655
chr4	136099279	136099295	protein_coding	Luzp1	exon	ENSMUSG00000001089	ProperStrand	35	chr6	71832550	71832595	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-6.6767
chr9	72595480	72595559	protein_coding	Nedd4	utr3	ENSMUSG00000032216	ProperStrand	308	chr9	15118328	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-0.8849
chr2	90235286	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	20991333	21040600	protein_coding	Peli1	exon	ENSMUSG00000020134	ProperStrand	69	3	-10.1465
chr2	152960369	152960409	protein_coding	Hck	exon	ENSMUSG00000003283	ProperStrand	8	chr11	97642951	97643041	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-6.3446
chr11	72303343	72303360	protein_coding	Spns2	utr5	ENSMUSG00000040447	ProperStrand	20	chr5	121655016	121655117	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	NonProperStrand	38	1	-16.4324
chr1	152270735	152270753	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	chr15	98350168	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	18	-21.0174
chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	chr19	43269721	43269737	protein_coding	Hpse2	intron	ENSMUSG00000074852	NonProperStrand	48	1	-12.1354
chr4	116875172	116875248	snRNA	ENSMUSG00000070228_U5	.	ENSMUSG00000070228	ProperStrand	131	chr15	5068442	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	4	-14.3628
chr11	115711645	115712009	protein_coding	Llgl2	exon	ENSMUSG00000020782	ProperStrand	62	chr12	60289436	60289526	protein_coding	Ctage5	exon	ENSMUSG00000021000	ProperStrand	35	1	-14.3399
chr4	122960993	122963955	protein_coding	Pabpc4	exon	ENSMUSG00000011257	ProperStrand	85	chr5	74489595	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-3.1395
chr15	81450511	81479687	protein_coding	Ep300	exon	ENSMUSG00000055024	ProperStrand	118	chr11	97642952	97642993	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-2.6515
chrX	49936129	49966931	protein_coding	Gpc3	exon	ENSMUSG00000055653	ProperStrand	43	chr14	76247753	76247778	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	5	-19.4281
chr8	64017612	64028375	protein_coding	Palld	exon	ENSMUSG00000058056	NonProperStrand	125	chr4	116827119	116827187	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	3	-12.9662
chr10	127509159	127511318	protein_coding	Ptges3	exon	ENSMUSG00000071072	ProperStrand	89	chr2	26493366	26493409	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	3	-7.6994
chr2	120389447	120389463	protein_coding	Zfp106	utr5	ENSMUSG00000027288	NonProperStrand	9	chr11	106362303	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-9.6932
chr19	47342513	47342603	protein_coding	Sh3pxd2a	exon	ENSMUSG00000053617	ProperStrand	57	chr7	116663653	116663733	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.6000
chr7	137767374	137767454	protein_coding	Tacc2	exon	ENSMUSG00000030852	ProperStrand	95	chr17	24857796	24857851	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-2.9222
chr2	154450733	154452559	protein_coding	Zfp341	exon	ENSMUSG00000059842	ProperStrand	7	chr11	69481335	69481403	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	3	-17.3914
chr2	164796661	164796679	protein_coding	Slc12a5	intron	ENSMUSG00000017740	NonProperStrand	40	chr10	60783700	60783771	protein_coding	X99384	utr3	ENSMUSG00000020092	ProperStrand	60	1	-14.1352
chr18	65243739	65243839	protein_coding	Nedd4l	intron	ENSMUSG00000024589	ProperStrand	44	chr18	35714252	35714291	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.0207
chr2	29852325	29852346	protein_coding	Spna2	exon	ENSMUSG00000057738	ProperStrand	222	chr1	162968218	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	3	-10.2647
chr7	117180475	117190070	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr7	117189883	117190067	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	823	-20.2204
chr6	47731685	47731719	misc_RNA	Y_RNA	.	ENSMUSG00000064945	ProperStrand	93	chr2	26493406	26493466	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-5.0959
chr10	102710217	102710307	LINE	Lx3B	L1	chr10Lx3B102710018	ProperStrand	1	chr3	76718578	76718668	LINE	Lx3A	L1	chr3Lx3A76718213	ProperStrand	1	1	-inf
chr16	32631825	32631902	protein_coding	Tfrc	utr3	ENSMUSG00000022797	ProperStrand	71	chr8	32260335	32260403	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	7	-19.2997
chr5	113919913	113919930	protein_coding	Wscd2	utr5	ENSMUSG00000085571	NonProperStrand	40	chr15	98350182	98350272	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-5.5496
chr13	100807792	100807841	protein_coding	Bdp1	exon	ENSMUSG00000049658	ProperStrand	159	chr5	130300487	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.0319
chr14	76904502	76904592	protein_coding	Tsc22d1	utr5	ENSMUSG00000022010	ProperStrand	86	chr11	98878344	98878424	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-5.5776
chr1	63225929	63225997	protein_coding	Eef1b2	intron	ENSMUSG00000025967	ProperStrand	106	chr10	61778251	61802805	protein_coding	Hk1	exon	ENSMUSG00000037012	ProperStrand	84	1	-11.4942
chr14	31953025	31953118	protein_coding	Stab1	exon	ENSMUSG00000042286	NonProperStrand	127	chr2	130101973	130102032	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-3.9223
chr7	135586023	135586102	protein_coding	Tial1	utr3	ENSMUSG00000030846	ProperStrand	25	chr10	23505152	23505215	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.6150
chr10	126532147	126532163	protein_coding	Os9	utr3	ENSMUSG00000040462	NonProperStrand	28	chr4	122968662	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-7.8023
chr16	57391748	57391793	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr2	63936034	63936053	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-2.5945
chr9	71499066	71499166	protein_coding	Cgnl1	exon	ENSMUSG00000032232	ProperStrand	46	chr7	116664809	116664872	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.0158
chr2	26494732	26494812	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	chr1	129228429	129228519	snoRNA	ENSMUSG00000093146_AC131793.1	.	ENSMUSG00000093146	ProperStrand	119	3	-5.3667
chr5	107933003	107933569	protein_coding	A830010M20Rik	exon	ENSMUSG00000044060	ProperStrand	1	chr4	131908262	131908352	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-inf
chr3	19528533	19528550	protein_coding	1700064H15Rik	exon	ENSMUSG00000082766	NonProperStrand	78	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-6.0732
chr2	4829164	4829180	protein_coding	Sephs1	utr3	ENSMUSG00000026662	NonProperStrand	271	chr12	88778699	88778766	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-3.5994
chr4	76614453	76614470	protein_coding	Ptprd	intron	ENSMUSG00000028399	ProperStrand	198	chr2	27395335	27395407	snRNA	ENSMUSG00000080538_U6atac	.	ENSMUSG00000080538	ProperStrand	8	1	-15.0456
chr18	56890733	56892894	protein_coding	Lmnb1	exon	ENSMUSG00000024590	ProperStrand	176	chr17	27572140	27572220	protein_coding	Grm4	exon	ENSMUSG00000063239	ProperStrand	147	1	-9.3573
chr8	108404869	108404935	protein_coding	Edc4	utr5	ENSMUSG00000036270	ProperStrand	34	chr13	21454721	21455459	protein_coding	Zscan12	utr5	ENSMUSG00000036721	ProperStrand	5	3	-19.6363
chr1	74283273	74283352	protein_coding	Arpc2	utr5	ENSMUSG00000006304	ProperStrand	16	chr19	8799829	8799882	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	3	-17.1784
chr7	34992903	34993353	protein_coding-noncoding	Gpi1	utr3	ENSMUSG00000036427	ProperStrand	19	chr16	23111694	23111749	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	5	-16.7580
chr10	62642619	62642636	protein_coding	Mypn	intron	ENSMUSG00000020067	ProperStrand	4	chr11	106647594	106647632	protein_coding	Ddx5	exon	ENSMUSG00000020719	ProperStrand	181	1	-16.8548
chr2	152163523	152163539	protein_coding	Trib3	utr3	ENSMUSG00000032715	NonProperStrand	46	chr16	23111466	23111490	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.6437
chr2	80132735	80132751	protein_coding	Prdx6b	utr5	ENSMUSG00000050114	NonProperStrand	5	chr10	23505152	23505277	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-9.7958
chr12	85075330	85075420	protein_coding	Psen1	utr3	ENSMUSG00000019969	ProperStrand	20	chr19	8800378	8800458	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-9.2764
chr11	40078623	40078641	lincRNA	Gm12132	intron	ENSMUSG00000085301	ProperStrand	5	chr14	76247711	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-9.2340
chr19	7131516	7131616	protein_coding	Macrod1	exon	ENSMUSG00000036278	ProperStrand	9	chr9	64023683	64023746	snoRNA	ENSMUSG00000064918_SNORD18	.	ENSMUSG00000064918	ProperStrand	370	2	-18.9273
chr17	32453268	32453285	protein_coding	Akap8	exon	ENSMUSG00000024045	ProperStrand	339	chr11	87240290	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	1	-7.5315
chr11	76224568	76224584	protein_coding	Timm22	intron	ENSMUSG00000020843	NonProperStrand	5	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-10.9706
chr4	141319644	141319733	protein_coding	Dnajc16	exon	ENSMUSG00000040697	ProperStrand	12	chr11	106362669	106362693	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	3	-21.1868
chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	4	-3.5726
chr14	20617726	20617816	protein_coding	Nid2	exon	ENSMUSG00000021806	NonProperStrand	10	chr16	57391628	57391718	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	2	-inf
chr2	178147767	178147783	protein_coding	Ppp1r3d	utr3	ENSMUSG00000049999	NonProperStrand	1	chr2	32818803	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-inf
chr5	74489214	74489304	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr11	102295576	102295720	protein_coding	Grn	exon	ENSMUSG00000034708	ProperStrand	43	2	-10.1898
chr1	34489983	34490001	miRNA	Mir5103	.	ENSMUSG00000092852	NonProperStrand	24	chr2	130103751	130103808	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-10.3215
chr15	34945625	34945642	protein_coding	Stk3	intron	ENSMUSG00000022329	NonProperStrand	28	chr2	119791737	119791756	protein_coding	Mga	utr3	ENSMUSG00000033943	ProperStrand	180	1	-12.6516
chr2	17236954	17237034	LINE	L1MD1	L1	chr2L1MD117236774	NonProperStrand	1	chr2	17236529	17236619	LINE	Lx5	L1	chr2Lx517236377	NonProperStrand	1	1	-inf
chr11	115200753	115200770	protein_coding	Otop3	exon	ENSMUSG00000018862	ProperStrand	59	chr11	6428076	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	5	-14.0190
chr1	75484537	75484553	protein_coding	Obsl1	exon	ENSMUSG00000026211	NonProperStrand	192	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-6.2837
chr5	99372453	99372470	protein_coding	Prkg2	exon	ENSMUSG00000029334	ProperStrand	22	chr5	121655016	121655066	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.6854
chr16	42282955	42282971	protein_coding	Gap43	intron	ENSMUSG00000047261	NonProperStrand	25	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.2649
chr12	87855238	87860744	protein_coding	Esrrb	exon	ENSMUSG00000021255	ProperStrand	254	chr4	131908689	131908751	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-0.7278
chr17	24514635	24514685	protein_coding	Abca3	exon	ENSMUSG00000024130	ProperStrand	20	chr11	69483136	69483187	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.4692
chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	chr11	66155921	66155940	protein_coding	Shisa6	intron	ENSMUSG00000053930	ProperStrand	23	1	-10.0445
chr3	45890068	45890087	LINE	Lx2B	L1	chr3Lx2B45888953	NonProperStrand	2	chr15	79908943	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	2	-inf
chr2	157221774	157221874	protein_coding	Manbal	utr3	ENSMUSG00000063019	ProperStrand	11	chr4	131865950	131865986	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.8470
chr5	136259329	136260060	protein_coding	Mdh2	exon	ENSMUSG00000019179	ProperStrand	50	chr19	8798752	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-5.1543
chr11	69483136	69483220	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	chrX	113862530	113862575	snoRNA	ENSMUSG00000088518_SNORA9	.	ENSMUSG00000088518	ProperStrand	280	4	-2.5140
chr1	92689614	92689630	protein_coding	Col6a3	exon	ENSMUSG00000048126	ProperStrand	79	chr9	15118321	15118343	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-2.9690
chr19	30173451	30173541	protein_coding	Gldc	utr3	ENSMUSG00000024827	ProperStrand	175	chr6	71832582	71832662	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-3.5708
chr15	100311922	100311938	protein_coding	Csrnp2	utr3	ENSMUSG00000044636	NonProperStrand	60	chr19	8963027	8963085	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-4.0582
chr14	52784220	52790548	protein_coding	Supt16h	exon	ENSMUSG00000035726	ProperStrand	193	chr17	95160908	95218242	protein_coding	2610044O15Rik	exon	ENSMUSG00000066057	NonProperStrand	70	1	-10.6599
chr10	127097405	127097436	protein_coding	Stat6	utr3	ENSMUSG00000002147	ProperStrand	8	chr19	17900101	17900117	snoRNA	ENSMUSG00000089540_snoU13	.	ENSMUSG00000089540	ProperStrand	99	1	-16.3889
chr2	129998649	129998700	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr6	125114314	125114388	protein_coding	Gapdh	intron	ENSMUSG00000057666	ProperStrand	356	2	-7.6446
chr19	7350734	7350782	protein_coding	Mark2	utr3	ENSMUSG00000024969	ProperStrand	75	chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	1	-8.1466
chr1	116762665	116762683	LTR	RMER17A2	ERVK	chr1RMER17A2116762668	ProperStrand	2	chr1	162965531	162965550	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-10.5602
chr11	98200362	98200388	Low_complexity	GC_rich	Low_complexity	chr11GC_rich98200242	ProperStrand	2	chr17	24615990	24616006	protein_coding	Mlst8	utr5	ENSMUSG00000024142	NonProperStrand	40	1	-inf
chr6	81992905	81992923	protein_coding	Fam176a	intron	ENSMUSG00000035104	ProperStrand	64	chr4	131908236	131908272	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.3270
chr19	24233341	24233434	protein_coding	Tjp2	intron	ENSMUSG00000024812	ProperStrand	63	chr5	130300521	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.4262
chr17	85393026	85393118	protein_coding	Ppm1b	utr5	ENSMUSG00000061130	ProperStrand	36	chr19	8799612	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	3	-17.6080
chr9	15119968	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	chr17	35299508	35299642	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	4	-1.8389
chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	chr7	149170855	149171340	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	1	-6.4586
chr1	56739659	56739749	LINE	Lx2B	L1	chr1Lx2B56737878	ProperStrand	1	chr1	78455115	78455195	protein_coding	Farsb	intron	ENSMUSG00000026245	NonProperStrand	3	1	-inf
chr12	81272485	81272513	protein_coding	Actn1	intron	ENSMUSG00000015143	ProperStrand	128	chr2	34628727	34628789	protein_coding	Hspa5	exon	ENSMUSG00000026864	ProperStrand	181	1	-9.5781
chr9	98976077	98976167	protein_coding	Pik3cb	intron	ENSMUSG00000032462	ProperStrand	48	chr4	131866152	131866232	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-4.0833
chr9	61908808	61916252	protein_coding	Glce	exon	ENSMUSG00000032252	ProperStrand	15	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-10.9588
chr11	29059357	29059375	protein_coding	Pnpt1	exon	ENSMUSG00000020464	ProperStrand	17	chr18	35716811	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.4666
chr13	7946924	7946942	LTR	MTC	MaLR	chr13MTC7946693	NonProperStrand	2	chr5	130300419	130300478	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-inf
chr3	85904467	85904491	snoRNA	ENSMUSG00000065847_SNORA32	.	ENSMUSG00000065847	ProperStrand	40	chr7	116664811	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	4	-11.1652
chr16	85802545	85802564	protein_coding	Adamts1	exon	ENSMUSG00000022893	ProperStrand	102	chr2	26493364	26493446	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-4.8420
chr1	88253674	88253774	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chr6	86224183	86224199	protein_coding	Tgfa	utr3	ENSMUSG00000029999	NonProperStrand	13	1	-10.4601
chr6	125115311	125115580	protein_coding	Gapdh	utr5	ENSMUSG00000057666	ProperStrand	356	chr2	158182155	158182255	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-1.8130
chr11	64949314	64949334	protein_coding	Arhgap44	intron	ENSMUSG00000033389	NonProperStrand	30	chr16	23111377	23111436	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.3326
chr17	24816023	24816051	protein_coding	Zfp598	exon	ENSMUSG00000041130	ProperStrand	26	chr9	15119665	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-10.1749
chr16	3979840	3984659	protein_coding	Slx4	intron	ENSMUSG00000039738	ProperStrand	18	chr18	33954895	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	4	-17.7924
chr12	81272485	81272513	protein_coding	Actn1	intron	ENSMUSG00000015143	ProperStrand	128	chr4	130490487	130490608	protein_coding	Laptm5	utr3	ENSMUSG00000028581	ProperStrand	34	1	-12.9393
chr9	103965325	103965365	protein_coding	Uba5	utr5	ENSMUSG00000032557	ProperStrand	111	chr19	8798489	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-4.0345
chr6	117875005	117875131	protein_coding	Hnrnpf	utr3	ENSMUSG00000042079	ProperStrand	147	chr1	63225259	63225285	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	9	-inf
chr9	15069885	15069901	protein_coding	Med17	exon	ENSMUSG00000031935	ProperStrand	135	chr9	120039533	120039616	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-3.4940
chr10	60809596	60809841	protein_coding	X99384	exon	ENSMUSG00000020092	ProperStrand	60	chr6	125112095	125112295	protein_coding	Gapdh	exon	ENSMUSG00000057666	ProperStrand	356	1	-9.7461
chrX	7780589	7780640	protein_coding	Porcn	exon	ENSMUSG00000031169	ProperStrand	2	chr5	30790882	30790898	protein_coding	Cib4	exon	ENSMUSG00000053194	ProperStrand	31	1	-inf
chr2	148698645	148700930	protein_coding	Cst3	exon	ENSMUSG00000027447	ProperStrand	13	chr10	23505253	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.8218
chr9	112123766	112123856	protein_coding	Arpp21	intron	ENSMUSG00000032503	ProperStrand	3	chr5	108336937	108337017	protein_coding	Rpl5	utr3	ENSMUSG00000058558	ProperStrand	235	2	-20.9714
chr5	108329617	108330906	protein_coding	Rpl5	utr5	ENSMUSG00000058558	ProperStrand	235	chr1	162965563	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.0896
chr4	139734868	139734889	protein_coding	Igsf21	intron	ENSMUSG00000040972	ProperStrand	9	chr17	24665421	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	3	-19.8956
chr9	44581237	44581794	protein_coding	Ift46	utr5	ENSMUSG00000002031	ProperStrand	28	chr7	118219574	118219618	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	4	-17.2799
chr5	114638445	114638461	protein_coding	Acacb	exon	ENSMUSG00000042010	ProperStrand	7	chr15	89260245	89260261	protein_coding	C730034F03Rik	exon	ENSMUSG00000079242	ProperStrand	2	1	-inf
chr1	94600714	94600731	LINE	L1MB8	L1	chr1L1MB894600394	ProperStrand	25	chrX	84483704	84483730	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-10.0149
chr10	126602534	126602550	protein_coding	B4galnt1	utr5	ENSMUSG00000006731	NonProperStrand	1	chr12	110271945	110271961	protein_coding	Begain	exon	ENSMUSG00000040867	NonProperStrand	9	1	-inf
chr4	108229960	108230036	protein_coding	Zcchc11	exon	ENSMUSG00000034610	ProperStrand	35	chr2	125499562	125499579	protein_coding	Eid1	utr3	ENSMUSG00000091337	ProperStrand	60	1	-14.4064
chr9	98685139	98685160	LTR	RLTR12B	ERVK	chr9RLTR12B98685125	NonProperStrand	1	chr2	32818841	32818941	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-inf
chr2	90235299	90235347	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	17018353	17018369	protein_coding	Zc3h4	exon	ENSMUSG00000059273	ProperStrand	95	1	-3.5991
chr5	74489212	74489302	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr12	21307386	21308234	protein_coding	Cpsf3	exon	ENSMUSG00000054309	ProperStrand	24	1	-7.4450
chr13	112216772	112216799	protein_coding	Gpbp1	exon	ENSMUSG00000032745	ProperStrand	85	chr1	162966833	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-5.5749
mmu-miR-2137	0	20	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	chr19	8798743	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	3	-7.9789
chr5	115722295	115722375	protein_coding	Rnf10	exon	ENSMUSG00000041740	ProperStrand	95	chr17	24857760	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.5682
chr1	107743297	107743316	protein_coding	Tnfrsf11a	utr3	ENSMUSG00000026321	NonProperStrand	100	chr7	29136537	29136586	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.5524
chr2	3428340	3429919	protein_coding	Hspa14	utr5	ENSMUSG00000079615	ProperStrand	14	chr18	35714193	35714218	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-6.2700
chr14	70841150	70841183	protein_coding	Polr3d	exon	ENSMUSG00000000776	ProperStrand	16	chr3	68889145	68889221	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-5.7992
chr16	35932620	35932636	protein_coding	Dtx3l	exon	ENSMUSG00000049502	ProperStrand	152	chr8	129468852	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	2	-4.7251
chr5	74489202	74489307	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr5	130295414	130295492	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	5	-0.9071
chrX	20265641	20265731	protein_coding	Cdk16	utr5	ENSMUSG00000031065	ProperStrand	30	chr11	97642992	97643072	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	6	-19.5750
chr5	65666934	65668597	protein_coding	Rfc1	exon	ENSMUSG00000029191	ProperStrand	53	chr15	100311922	100311938	protein_coding	Csrnp2	utr3	ENSMUSG00000044636	NonProperStrand	60	1	-13.5632
chr5	74489202	74489586	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr17	35299505	35299631	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	7	-1.1035
chr4	129194184	129194657	protein_coding	Hdac1	exon	ENSMUSG00000028800	ProperStrand	49	chr18	35716685	35716775	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.5106
chr10	116490087	116490152	protein_coding	Cct2	exon	ENSMUSG00000034024	ProperStrand	100	chr12	88778651	88778741	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-5.4942
chr10	62295703	62296343	protein_coding	Tet1	exon	ENSMUSG00000047146	ProperStrand	286	chr5	108336416	108336496	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-3.7006
chr4	154932882	154932972	protein_coding	Gnb1	utr3	ENSMUSG00000029064	ProperStrand	69	chr4	131908711	131908795	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-2.0530
chr2	90235286	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	83929329	83929346	protein_coding	Tada2a	intron	ENSMUSG00000018651	ProperStrand	32	2	-9.3066
chr16	37777391	37777408	protein_coding	Fstl1	exon	ENSMUSG00000022816	ProperStrand	179	chr16	23110455	23110557	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-2.8357
chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	chr7	152118581	152118597	protein_coding	Ccnd1	exon	ENSMUSG00000070348	ProperStrand	93	1	-9.7388
chr9	21637334	21637513	protein_coding	Dock6	exon	ENSMUSG00000032198	ProperStrand	155	chr9	120038552	120038632	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	4	-6.0957
chr9	22180796	22180886	protein_coding	Anln	exon	ENSMUSG00000036777	ProperStrand	133	chr19	30969167	30969184	protein_coding	Prkg1	exon	ENSMUSG00000052920	NonProperStrand	41	2	-20.8942
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chrX	150167949	150168028	processed_transcript	2210013O21Rik	.	ENSMUSG00000086316	ProperStrand	4	4	-inf
chr11	59778161	59778177	protein_coding	Rasd1	exon	ENSMUSG00000049892	NonProperStrand	49	chr3	121157985	121160022	protein_coding	Cnn3	exon	ENSMUSG00000053931	ProperStrand	77	1	-13.2233
chr3	95462814	95462872	protein_coding	Mcl1	exon	ENSMUSG00000038612	ProperStrand	75	chr7	116663666	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.1374
chr18	38004986	38005048	protein_coding	Diap1	utr3	ENSMUSG00000024456	ProperStrand	77	chr4	122968660	122968718	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	4	-17.5683
chr13	9833552	9833618	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr17	32453342	32453370	protein_coding	Akap8	exon	ENSMUSG00000024045	ProperStrand	339	1	-1.8502
chr8	87368490	87368508	protein_coding	Calr	exon	ENSMUSG00000003814	ProperStrand	232	chr13	41922627	41922644	protein_coding	9530008L14Rik	intron	ENSMUSG00000058022	NonProperStrand	22	1	-12.6349
chr4	114741487	114741504	protein_coding	Tal1	utr3	ENSMUSG00000028717	NonProperStrand	69	chr15	79908960	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	3	-12.1933
chr8	127363845	127364386	protein_coding	2810004N23Rik	exon	ENSMUSG00000031984	ProperStrand	22	chr15	82980078	82980132	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-9.1585
chr2	162900216	162900306	protein_coding	Mybl2	exon	ENSMUSG00000017861	ProperStrand	230	chr2	112179529	112179609	protein_coding	Slc12a6	exon	ENSMUSG00000027130	ProperStrand	35	1	-11.7071
chr2	120365219	120371586	lincRNA	Gm17675	exon	ENSMUSG00000091714	ProperStrand	3	chr4	131908686	131908810	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-6.9471
chr1	72757863	72758767	protein_coding	Rpl37a	utr5	ENSMUSG00000046330	ProperStrand	94	chr19	8963028	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-2.9161
chr12	113971613	113971703	protein_coding	AW555464	exon	ENSMUSG00000072825	ProperStrand	96	chr5	108334238	108336486	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	2	-6.6047
chr2	90235316	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr16	72800514	72800532	protein_coding	Robo1	intron	ENSMUSG00000022883	NonProperStrand	188	1	-2.3901
chr11	77579136	77579188	protein_coding	Myo18a	utr5	ENSMUSG00000000631	ProperStrand	124	chr4	131865930	131865986	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-2.6697
chrX	98643345	98643459	protein_coding	Nono	utr3	ENSMUSG00000031311	ProperStrand	102	chr2	87643121	87643138	protein_coding	Olfr1143	exon	ENSMUSG00000068815	NonProperStrand	4	1	-17.8520
chr18	67475022	67475129	protein_coding	Impa2	intron	ENSMUSG00000024525	ProperStrand	31	chr17	24665449	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	3	-14.3626
chr6	32742412	32742466	protein_coding	Chchd3	utr3	ENSMUSG00000053768	ProperStrand	6	chr7	116663651	116663741	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-7.0045
chr14	87912387	87912403	protein_coding	Tdrd3	utr3	ENSMUSG00000022019	NonProperStrand	46	chr4	118781498	118809117	protein_coding	Slc2a1	utr3	ENSMUSG00000028645	ProperStrand	361	2	-16.1838
chr11	120000362	120000428	protein_coding	Slc38a10	exon	ENSMUSG00000061306	ProperStrand	91	chr15	82980083	82980173	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	2	-10.2260
chr16	44225761	44225778	protein_coding	Gm608	utr3	ENSMUSG00000068284	NonProperStrand	29	chr18	73693166	73693186	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-6.9646
chr4	155338944	155338960	protein_coding	Fam132a	exon	ENSMUSG00000023571	ProperStrand	20	chr7	29136525	29136574	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.3737
chr11	80571453	80571470	protein_coding	Myo1d	intron	ENSMUSG00000035441	NonProperStrand	24	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.3401
chr5	149113021	149113038	protein_coding	Mtus2	exon	ENSMUSG00000029651	ProperStrand	114	chr10	116499141	116499173	protein_coding	Cct2	exon	ENSMUSG00000034024	ProperStrand	100	1	-10.9979
chr13	8766420	8766473	protein_coding	Adarb2	utr3	ENSMUSG00000052551	NonProperStrand	61	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-7.7066
chr19	14937183	14937263	LTR	MLT1H	MaLR	chr19MLT1H14937136	ProperStrand	1	chr19	14936965	14937055	Simple_repeat	(CA)n	Simple_repeat	chr19(CA)n14936951	NonProperStrand	1	1	-inf
chr15	57978208	57978298	snoRNA	ENSMUSG00000080461_SNORA11	.	ENSMUSG00000080461	ProperStrand	171	chr18	33954816	33954896	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-1.7179
chr13	9833563	9833652	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr11	6520375	6520444	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	5	-3.9999
chr11	102558966	102558984	protein_coding	Ccdc43	exon	ENSMUSG00000020925	ProperStrand	26	chr11	69483252	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.9646
chrX	7828638	7828656	protein_coding	Ftsj1	intron	ENSMUSG00000031171	ProperStrand	2	chr17	35087917	35087959	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-12.6096
chr19	42225881	42225897	protein_coding	Marveld1	utr3	ENSMUSG00000044345	NonProperStrand	112	chr11	68886963	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	2	-5.1722
chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-2.1916
chrX	71589885	71589904	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr15	78081334	78081350	protein_coding	Ncf4	exon	ENSMUSG00000071715	NonProperStrand	2	1	-17.9123
chr9	20304322	20304348	protein_coding	Zfp266	exon	ENSMUSG00000060510	ProperStrand	20	chr14	76247741	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-6.3209
chr7	87833654	87833670	protein_coding	Crtc3	utr5	ENSMUSG00000030527	NonProperStrand	2	chr9	120038465	120038529	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-10.2959
chr14	51427312	51427392	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr3	34550037	34550127	protein_coding	Sox2	exon	ENSMUSG00000074637	ProperStrand	299	1	-4.0868
chr5	128076288	128076304	protein_coding	Slc15a4	utr3	ENSMUSG00000029416	ProperStrand	49	chr7	151636450	151636486	protein_coding	Cttn	intron	ENSMUSG00000031078	ProperStrand	33	2	-20.0611
chr12	102956633	102956650	protein_coding	Tc2n	utr5	ENSMUSG00000021187	ProperStrand	32	chr8	73222885	73222940	protein_coding	Jund	utr5	ENSMUSG00000071076	ProperStrand	50	1	-14.9436
chr9	54572261	54575409	protein_coding	Wdr61	exon	ENSMUSG00000061559	ProperStrand	14	chr9	15119292	15119425	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	6	-inf
chr13	68759738	68764669	protein_coding	Adcy2	exon	ENSMUSG00000021536	ProperStrand	237	chr13	45015260	45015313	protein_coding	Jarid2	exon	ENSMUSG00000038518	ProperStrand	372	2	-11.1320
chr17	46884450	46884466	protein_coding	Cnpy3	exon	ENSMUSG00000023973	ProperStrand	85	chr19	29686954	29686970	protein_coding	Ermp1	utr3	ENSMUSG00000046324	NonProperStrand	7	1	-17.0024
chr16	57391633	57391706	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr13	49779767	49779802	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	NonProperStrand	2	1	-18.0561
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr9	15119631	15119767	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	6	-2.2222
chr7	88529496	88529520	protein_coding	Cpeb1	intron	ENSMUSG00000025586	NonProperStrand	29	chr19	8798740	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	3	-14.3575
chr17	3431955	3431975	protein_coding	Tiam2	intron	ENSMUSG00000023800	NonProperStrand	7	chr17	35087921	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-9.5701
chr11	77344658	77344748	protein_coding	Taok1	utr3	ENSMUSG00000017291	ProperStrand	41	chr10	23505173	23505253	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.7922
chr15	79913298	79913347	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr2	10512721	10512760	protein_coding	Sfmbt2	utr3	ENSMUSG00000061186	ProperStrand	17	2	-9.8834
chr19	12910228	12910245	LTR	RMER20B	ERVK	chr19RMER20B12910189	NonProperStrand	5	chr7	19954166	19955152	protein_coding	Ppp1r13l	exon	ENSMUSG00000040734	ProperStrand	13	1	-19.9979
chr2	27309891	27309912	protein_coding	Brd3	exon	ENSMUSG00000026918	ProperStrand	85	chr7	108152260	108160451	protein_coding	P2ry2	utr5	ENSMUSG00000032860	NonProperStrand	1	1	-inf
chr8	73282574	73282602	protein_coding	Mpv17l2	utr3	ENSMUSG00000035559	ProperStrand	14	chr16	23109049	23109093	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	2	-16.2551
chr5	139626053	139626153	processed_transcript	Gm15672	.	ENSMUSG00000086873	ProperStrand	1	chr17	24857796	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-inf
chr5	136262167	136263416	protein_coding	Mdh2	exon	ENSMUSG00000019179	ProperStrand	50	chr8	13416897	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-6.8159
chr16	17038510	17043805	protein_coding	Mapk1	utr3	ENSMUSG00000063358	ProperStrand	67	chr14	33005037	33005059	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	2	-6.3979
chr7	4760064	4762053	protein_coding	Ube2s	exon	ENSMUSG00000060860	ProperStrand	62	chr15	34370545	34370630	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-3.4888
chr4	151730301	151730737	protein_coding	Chd5	exon	ENSMUSG00000005045	NonProperStrand	147	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-4.1156
chr9	97266363	97266385	protein_coding	Trim42	exon	ENSMUSG00000032451	ProperStrand	1	chr5	151755616	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-inf
chr8	69228390	69228406	protein_coding	Npy1r	exon	ENSMUSG00000036437	ProperStrand	13	chr18	20761992	20762048	protein_coding	Dsg2	utr3	ENSMUSG00000044393	ProperStrand	60	1	-16.4478
chr4	32861398	32861444	protein_coding	Mdn1	utr3	ENSMUSG00000058006	ProperStrand	184	chr8	34802341	34802415	snoRNA	ENSMUSG00000088856_SNORA48	.	ENSMUSG00000088856	ProperStrand	236	3	-18.1576
chr13	105012975	105013020	protein_coding	Ppwd1	exon	ENSMUSG00000021713	ProperStrand	7	chr7	29136619	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-10.7477
chr16	91729698	91729723	protein_coding	Itsn1	utr5	ENSMUSG00000022957	ProperStrand	172	chr9	103068037	103068054	protein_coding	Rab6b	intron	ENSMUSG00000032549	NonProperStrand	4	1	-16.8278
chr12	87794762	87794797	protein_coding	Esrrb	intron	ENSMUSG00000021255	NonProperStrand	14	chr9	120039629	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-6.1360
chr3	104457211	104457293	protein_coding	Slc16a1	exon	ENSMUSG00000032902	ProperStrand	48	chr14	52829480	52829570	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	2	-13.7519
chr5	8057598	8059360	protein_coding	Sri	exon	ENSMUSG00000003161	ProperStrand	1	chr5	92857198	92857304	protein_coding	Nup54	exon	ENSMUSG00000034826	ProperStrand	16	1	-inf
chr9	15119636	15119726	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	chr1	187066785	187066821	snoRNA	ENSMUSG00000077571_Snora36b	.	ENSMUSG00000077571	ProperStrand	244	4	-3.3478
chr2	26493427	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr15	97594142	97594158	protein_coding	Rapgef3	intron	ENSMUSG00000022469	ProperStrand	19	1	-8.5018
chr4	58083061	58083077	protein_coding	Svep1	exon	ENSMUSG00000028369	ProperStrand	54	chr10	77863415	77863515	protein_coding	Rrp1	utr3	ENSMUSG00000061032	ProperStrand	177	1	-11.3551
chr3	95297761	95298437	protein_coding	Arnt	exon	ENSMUSG00000015522	ProperStrand	18	chr15	34370556	34370636	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-5.8762
chr16	23111727	23111827	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	chr11	68938672	68938712	tRNA	tRNA1816-LysTTT	.	260222	ProperStrand	13	8	-19.9038
chr6	125090879	125091117	protein_coding	Nop2	exon	ENSMUSG00000038279	ProperStrand	39	chr19	8798743	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-5.6406
chr10	80640900	80641446	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr18	75161572	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	7	-8.8209
chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	chr12	112779150	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-2.3274
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr2	91436237	91436336	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	4	-8.3540
chr11	51811031	51811077	protein_coding	Ube2b	intron	ENSMUSG00000020390	ProperStrand	57	chr9	56266647	56266665	protein_coding	Hmg20a	utr5	ENSMUSG00000032329	ProperStrand	87	2	-18.9640
chr7	129059283	129060041	protein_coding	Scnn1b	exon	ENSMUSG00000030873	ProperStrand	26	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-11.0592
chr7	133938950	133939142	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	chr11	86505647	86505663	protein_coding	Ptrh2	utr3	ENSMUSG00000072582	ProperStrand	1	1	-inf
chr14	122046000	122046016	protein_coding	Dock9	intron	ENSMUSG00000025558	ProperStrand	38	chr1	162965980	162966037	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-4.4652
chr17	32453268	32453285	protein_coding	Akap8	exon	ENSMUSG00000024045	ProperStrand	339	chr8	73419657	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-1.2425
chr1	120355714	120355804	snRNA	ENSMUSG00000080542_U4atac	.	ENSMUSG00000080542	ProperStrand	73	chr9	120038564	120038644	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.6926
chr3	128995080	128995097	protein_coding	Enpep	intron	ENSMUSG00000028024	NonProperStrand	20	chr16	23110939	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.6223
chr11	117903560	117903582	protein_coding	Dnahc17	intron	ENSMUSG00000033987	NonProperStrand	20	chr18	73693165	73693185	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-7.7147
chrX	139289426	139289443	protein_coding	Ammecr1	utr3	ENSMUSG00000042225	NonProperStrand	1	chr11	106362559	106362635	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-inf
chr11	19309467	19309557	LTR	MMETn-int	ERVK	chr11MMETn-int19309455	ProperStrand	6	chrX	34622949	34623029	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-7.7498
chr13	9833551	9833615	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr5	30112667	30112767	protein_coding	Dnajb6	utr3	ENSMUSG00000029131	ProperStrand	81	1	-4.3786
chr7	70168871	70168961	LINE	L1Md_A	L1	chr7L1Md_A70168707	ProperStrand	1	chr7	116664811	116664891	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-inf
chr7	148195607	148195623	protein_coding	Ifitm3	utr3	ENSMUSG00000025492	NonProperStrand	20	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-5.7112
chr18	63109676	63109692	protein_coding	Apcdd1	exon	ENSMUSG00000071847	NonProperStrand	254	chr1	136729073	136729092	protein_coding	Ppp1r12b	intron	ENSMUSG00000073557	NonProperStrand	12	1	-13.7047
chr12	30635185	30635204	protein_coding	Pxdn	intron	ENSMUSG00000020674	ProperStrand	33	chr1	63225577	63225655	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-7.8623
chrX	98835609	98859386	protein_coding	Ogt	utr5	ENSMUSG00000034160	ProperStrand	49	chr16	23111392	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-2.9030
chr13	58293287	58293478	protein_coding	Ubqln1	exon	ENSMUSG00000005312	ProperStrand	49	chr2	26493388	26493478	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-4.1229
chr2	135824338	135824365	protein_coding	Plcb4	intron	ENSMUSG00000039943	ProperStrand	50	chr1	172975135	172975189	tRNA	tRNA699-GlyGCC	.	1094756	ProperStrand	660	1	-8.8820
chr5	118376503	118376519	protein_coding	Nos1	exon	ENSMUSG00000029361	NonProperStrand	237	chr7	38468013	38468033	protein_coding	Zfp536	intron	ENSMUSG00000043456	ProperStrand	57	1	-10.6618
chrX	33094710	33094727	LTR	RodERV21-int	ERV1	chrXRodERV21-int33094516	NonProperStrand	8	chr11	77995189	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-10.2911
chr15	100523154	100523244	protein_coding	Galnt6	utr3	ENSMUSG00000037280	ProperStrand	4	chr7	117189944	117190024	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-8.8371
chr14	45905678	45905751	protein_coding	Ero1l	utr3	ENSMUSG00000021831	ProperStrand	18	chr3	123210854	123210888	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-7.1461
chr6	134780323	134780339	protein_coding	Crebl2	utr5	ENSMUSG00000032652	ProperStrand	41	chr17	24857492	24857544	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	1	-10.4201
chr1	34256243	34256333	protein_coding	Dst	utr5	ENSMUSG00000026131	ProperStrand	461	chrX	49111308	49111337	protein_coding	Usp26	intron	ENSMUSG00000055780	ProperStrand	10	1	-12.8940
chr15	81824501	81824547	protein_coding	Pppde2	utr3	ENSMUSG00000022472	ProperStrand	12	chr11	69483136	69483188	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-5.4834
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr2	22445094	22445134	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	2	-3.4236
chr9	40611311	40611337	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr17	6107150	6107166	protein_coding	Tulp4	intron	ENSMUSG00000034377	ProperStrand	164	1	-6.1455
chr2	180922434	180922525	protein_coding	Ppdpf	exon	ENSMUSG00000016344	ProperStrand	7	chr5	111082720	111082737	protein_coding	Ddx51	exon	ENSMUSG00000029504	ProperStrand	54	1	-18.1310
chr13	64471582	64471601	protein_coding	Ctsl	utr5	ENSMUSG00000021477	ProperStrand	44	chr4	126559848	126566767	protein_coding	Zmym4	exon	ENSMUSG00000042446	ProperStrand	94	1	-13.0368
chr14	63554376	63554395	protein_coding	Wdfy2	intron	ENSMUSG00000014547	NonProperStrand	2	chr2	27315601	27315660	protein_coding	Brd3	intron	ENSMUSG00000026918	ProperStrand	85	1	-inf
chr9	78023108	78023150	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr1	162968442	162968487	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	4	-1.7606
chrX	12864385	12870593	protein_coding	Ddx3x	utr3	ENSMUSG00000000787	ProperStrand	67	chr16	23111372	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	6	-8.6360
chr1	93263065	93263081	protein_coding	Fam132b	exon	ENSMUSG00000047443	NonProperStrand	98	chr19	8963094	8963184	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-2.8158
chr9	80157310	80157326	protein_coding	Myo6	utr3	ENSMUSG00000033577	ProperStrand	29	chr8	73419725	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.4906
chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	chr10	120709244	120712786	protein_coding	Tbc1d30	exon	ENSMUSG00000052302	ProperStrand	233	1	-8.0498
chr11	97889749	97890725	protein_coding	Rpl19	exon	ENSMUSG00000017404	ProperStrand	120	chr9	120038555	120038611	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-3.4003
chr8	128519388	128519478	protein_coding	Kcnk1	exon	ENSMUSG00000033998	ProperStrand	16	chr16	23111384	23111464	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-11.9923
chr1	74470436	74470453	protein_coding	Vil1	exon	ENSMUSG00000026175	ProperStrand	68	chr17	39985356	39985419	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-5.6865
chr13	56804912	56804928	protein_coding	Smad5	utr5	ENSMUSG00000021540	ProperStrand	47	chr5	92485124	92485214	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	1	-9.2298
chr11	72257563	72257580	protein_coding	Mybbp1a	exon	ENSMUSG00000040463	ProperStrand	279	chr8	73419683	73419743	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-0.7848
chr6	45494576	45494594	protein_coding	Cntnap2	intron	ENSMUSG00000039419	NonProperStrand	283	chr8	126441405	126441421	protein_coding	Nup133	exon	ENSMUSG00000039509	ProperStrand	59	1	-10.2381
chr15	86663198	86663288	LINE	HAL1-2a_MD	L1	chr15HAL1-2a_MD86663222	NonProperStrand	1	chr4	15840444	15840524	LTR	IAPEY3-int	ERVK	chr4IAPEY3-int15839859	ProperStrand	1	1	-inf
chr19	47185545	47186554	protein_coding	Pdcd11	exon	ENSMUSG00000025047	ProperStrand	137	chr3	88497948	88497979	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	3	-13.4408
chr2	125389949	125389966	protein_coding	Cep152	exon	ENSMUSG00000068394	ProperStrand	60	chr8	73419657	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-5.3912
chr5	136707644	136707662	protein_coding	Sh2b2	exon	ENSMUSG00000005057	NonProperStrand	101	chr19	43269721	43269737	protein_coding	Hpse2	intron	ENSMUSG00000074852	NonProperStrand	48	2	-19.1699
chr17	36323033	36323049	protein_coding	H2-T3	utr3	ENSMUSG00000054128	NonProperStrand	25	chr9	120039533	120039583	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-4.9793
chr1	88253596	88253642	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chr1	95405736	95405777	protein_coding	Sept2	utr3	ENSMUSG00000026276	ProperStrand	136	3	-13.2619
chr9	114318478	114318568	protein_coding	Glb1	intron	ENSMUSG00000045594	ProperStrand	67	chr14	76247714	76247794	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-3.9640
chr13	120238767	120239532	protein_coding	Paip1	exon	ENSMUSG00000025451	ProperStrand	3	chr7	150717325	150717415	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-11.8280
chr5	91230684	91230701	protein_coding	Cxcl15	utr3	ENSMUSG00000029375	NonProperStrand	1	chr14	76247711	76247787	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-inf
chr4	131866153	131866251	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	chr4	131866628	131866673	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	5	-4.0698
chr9	15118322	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	NonProperStrand	11	chr8	73419683	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	NonProperStrand	53	1	-17.0281
chr4	82114659	82114675	protein_coding	Nfib	intron	ENSMUSG00000008575	ProperStrand	50	chr10	40007849	40007887	protein_coding	Amd1	utr3	ENSMUSG00000075232	ProperStrand	21	1	-15.7883
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr13	112540780	112541440	protein_coding	Map3k1	exon	ENSMUSG00000021754	ProperStrand	113	1	-6.5383
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr6	45965480	46120177	protein_coding	Cntnap2	exon	ENSMUSG00000039419	NonProperStrand	283	1	-5.8302
chr5	117732690	117732790	protein_coding	Pebp1	utr3	ENSMUSG00000032959	ProperStrand	54	chr16	23111435	23111505	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.4069
chr4	109537447	109537527	protein_coding	Faf1	intron	ENSMUSG00000010517	ProperStrand	29	chr18	35714172	35714262	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.8207
chr9	41784820	41784910	protein_coding	Sorl1	intron	ENSMUSG00000049313	ProperStrand	112	chr17	13112498	13112578	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-3.4097
chr9	78023109	78023162	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr5	108536724	108536745	protein_coding	Mtf2	utr3	ENSMUSG00000029267	ProperStrand	39	2	-10.8750
chr11	101052924	101052951	protein_coding	Ezh1	utr3	ENSMUSG00000006920	ProperStrand	9	chr18	35714152	35714252	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-7.1819
chr2	76471660	76471676	protein_coding	Prkra	exon	ENSMUSG00000002731	NonProperStrand	65	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.1314
chr7	133427075	133427093	protein_coding	Sbk1	intron	ENSMUSG00000042978	NonProperStrand	1	chr10	23506278	23506347	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-inf
chr15	84818244	84818261	protein_coding	5031439G07Rik	utr5	ENSMUSG00000036046	ProperStrand	3	chr4	131865871	131865957	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.6896
chr18	75160712	75160777	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	chr17	35088971	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	2	-3.7266
chr2	130103445	130103493	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	chr5	108334222	108334266	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	2	-1.2655
chr19	4192865	4193110	protein_coding	Ppp1ca	exon	ENSMUSG00000040385	ProperStrand	40	chr11	62590601	62590630	snoRNA	ENSMUSG00000064692_SNORA67	.	ENSMUSG00000064692	ProperStrand	185	1	-11.8725
chr4	108719275	108720290	protein_coding	Nrd1	exon	ENSMUSG00000053510	ProperStrand	76	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-4.7544
chr13	110740428	110740497	protein_coding	Pde4d	exon	ENSMUSG00000021699	ProperStrand	92	chr5	36191462	36191501	protein_coding	Ablim2	exon	ENSMUSG00000029095	ProperStrand	36	2	-20.3203
chr18	80951106	80953237	protein_coding	Atp9b	exon	ENSMUSG00000024566	ProperStrand	30	chr17	24857717	24857807	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	4	-11.9113
chr7	116663744	116663770	protein_coding-noncoding	Rpl27a	utr5	ENSMUSG00000046364	ProperStrand	57	chr9	120039263	120039303	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	1	-9.6267
chr2	145076803	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	chr14	76247725	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	4	-1.6149
chr11	48615263	48615281	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	chr7	51505224	51505308	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	1	-4.7048
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	140232168	140232209	protein_coding	Ints1	exon	ENSMUSG00000029547	ProperStrand	45	1	-5.0171
chr12	86562541	86562582	protein_coding	Eif2b2	exon	ENSMUSG00000004788	ProperStrand	15	chr10	127523250	127523449	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	1	-11.4819
chr13	9833566	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr15	83195527	83195544	protein_coding	1700001L05Rik	utr5	ENSMUSG00000075511	NonProperStrand	2	1	-12.3538
chr17	43686651	43686731	SINE	B1_Mur4	Alu	chr17B1_Mur443686623	ProperStrand	1	chr3	95948015	95948105	protein_coding	Otud7b	intron	ENSMUSG00000038495	ProperStrand	11	1	-inf
chr19	32464589	32464605	lincRNA	2700046G09Rik	exon	ENSMUSG00000024893	NonProperStrand	13	chr16	23111383	23111416	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.8569
chr2	22444541	22444559	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	chr4	122968664	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-1.3232
chr14	51427287	51427321	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-1.9934
chr2	11512333	11512413	protein_coding	Rbm17	exon	ENSMUSG00000037197	ProperStrand	50	chr6	124665382	124665472	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	2	-11.7191
chr10	75120176	75120569	protein_coding	Cabin1	exon	ENSMUSG00000020196	ProperStrand	62	chr4	131908689	131908739	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.1795
chr7	48893927	48894002	protein_coding	Zfp788	intron	ENSMUSG00000074165	ProperStrand	2	chr2	26494711	26494765	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-10.3719
chr19	5800079	5800124	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr14	64249096	64249119	protein_coding	Xkr6	intron	ENSMUSG00000035067	NonProperStrand	8	1	-11.6716
chr17	32339290	32339368	protein_coding	Brd4	exon	ENSMUSG00000024002	ProperStrand	121	chr8	73419683	73419740	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-1.9344
chr7	52382616	52382915	protein_coding	Rpl13a	exon	ENSMUSG00000074129	ProperStrand	269	chr17	35299551	35299641	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-2.0710
chr11	94201784	94201800	protein_coding	Ankrd40	utr3	ENSMUSG00000020864	ProperStrand	11	chr16	91729698	91729722	protein_coding	Itsn1	utr5	ENSMUSG00000022957	ProperStrand	172	1	-14.6614
chr17	35379675	35379699	protein_coding	Ddx39b	utr5	ENSMUSG00000019432	ProperStrand	119	chr14	33005138	33005209	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-2.7479
chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	chr11	89163837	89163854	protein_coding	Nog	utr5	ENSMUSG00000048616	ProperStrand	1	1	-inf
chr4	45829230	45839290	protein_coding	Igfbpl1	exon	ENSMUSG00000035551	ProperStrand	4	chr4	131866155	131866235	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-9.1999
chr8	82208268	82208332	protein_coding	Abce1	utr3	ENSMUSG00000058355	ProperStrand	66	chr17	24856620	24856682	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-6.2388
chr16	35479867	35479916	protein_coding	Pdia5	intron	ENSMUSG00000022844	ProperStrand	26	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.8707
chr3	138122992	138123030	protein_coding	Metap1	utr3	ENSMUSG00000005813	ProperStrand	9	chr7	134671411	134671511	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-11.7505
chr7	13881623	13881713	protein_coding	Lig1	exon	ENSMUSG00000056394	ProperStrand	89	chr6	124665263	124665342	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	1	-6.1543
chr17	28828535	28828553	protein_coding	Mapk14	utr5	ENSMUSG00000053436	ProperStrand	40	chr11	98878375	98878457	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-7.0902
chr5	141098470	141098491	protein_coding	Ttyh3	utr3	ENSMUSG00000036565	ProperStrand	22	chr4	131908688	131908756	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-7.4295
chr15	78798443	78798461	protein_coding	Triobp	exon	ENSMUSG00000033088	NonProperStrand	6	chr11	97643044	97643060	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-6.9580
chr13	74494657	74494675	protein_coding	Ccdc127	utr3	ENSMUSG00000021578	NonProperStrand	54	chr14	71061146	71061162	protein_coding	Xpo7	utr3	ENSMUSG00000022100	ProperStrand	109	1	-12.3265
chr9	107971339	107971399	protein_coding	Rnf123	exon	ENSMUSG00000041528	ProperStrand	12	chr11	68715166	68715183	protein_coding	Rpl26	utr5	ENSMUSG00000060938	ProperStrand	130	1	-15.0311
chr10	107677587	107677605	protein_coding	Ppp1r12a	intron	ENSMUSG00000019907	ProperStrand	65	chr16	23111399	23111499	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	5	-6.9116
chr4	118951715	118951754	protein_coding	Ybx1	exon	ENSMUSG00000028639	ProperStrand	171	chr15	79908956	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	6	-17.7661
chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	chr9	64022856	64022921	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-4.2907
chr8	95419933	95420023	protein_coding	Lpcat2	intron	ENSMUSG00000033192	ProperStrand	12	chr7	117189944	117190024	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-6.4655
chr3	34549872	34549962	protein_coding	Sox2	exon	ENSMUSG00000074637	ProperStrand	299	chr7	67125763	67125825	snoRNA	ENSMUSG00000089375_Snord107	.	ENSMUSG00000089375	ProperStrand	451	7	-inf
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	90644839	90644899	tRNA	tRNA856-AspGTC	.	1288705	ProperStrand	65	2	-7.1973
chr10	77512875	77512930	protein_coding	Dnmt3l	exon	ENSMUSG00000000730	ProperStrand	37	chr3	123210910	123210979	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-7.4860
chr9	59163001	59163091	protein_coding	Adpgk	utr3	ENSMUSG00000025236	ProperStrand	19	chr4	122970390	122970470	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-9.7357
chr4	116883492	116883549	snRNA	ENSMUSG00000070237_U5	.	ENSMUSG00000070237	ProperStrand	154	chr5	121655016	121655061	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.0903
chr9	120040243	120040271	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	chr8	72441688	72441866	protein_coding	Gatad2a	exon	ENSMUSG00000036180	ProperStrand	112	1	-8.2745
chr4	129306809	129307564	protein_coding	Txlna	exon	ENSMUSG00000053841	ProperStrand	37	chr10	107800770	107800850	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	1	-9.0415
chr11	106684003	106684019	protein_coding	Smurf2	exon	ENSMUSG00000018363	ProperStrand	79	chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-7.1916
chr7	150187817	150187834	antisense	Gm15024	.	ENSMUSG00000052281	ProperStrand	6	chr3	136374171	136374215	protein_coding	Ppp3ca	intron	ENSMUSG00000028161	ProperStrand	45	1	-18.1260
chr7	13615289	13615379	protein_coding-noncoding	Trim28	utr5	ENSMUSG00000005566	ProperStrand	16	chr19	8963044	8963124	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.7073
chr18	50338726	50338769	protein_coding	Hsd17b4	exon	ENSMUSG00000024507	ProperStrand	19	chr19	8799845	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	3	-16.4350
chr13	9833563	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr15	36720608	36720652	protein_coding	Ywhaz	exon	ENSMUSG00000022285	ProperStrand	73	2	-7.6008
chr1	72898633	72898709	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	chr1	165926132	165926148	protein_coding	2810422O20Rik	utr5	ENSMUSG00000041396	ProperStrand	4	1	-15.1528
chr8	98269957	98270096	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	chr19	8798739	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	9	-1.9509
chr8	11217281	11221398	protein_coding	Col4a1	exon	ENSMUSG00000031502	ProperStrand	64	chr7	116664811	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-4.3138
chr18	35714263	35714296	lincRNA	Snhg4	intron	ENSMUSG00000090430	ProperStrand	270	chr11	69481335	69481417	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	3	-2.8628
chr17	36000485	36000501	protein_coding	Nrm	exon	ENSMUSG00000059791	ProperStrand	253	chr5	108336363	108336411	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-2.2600
chr6	70335717	70335797	Low_complexity	GA-rich	Low_complexity	chr6GA-rich70335728	NonProperStrand	1	chr6	70335569	70335659	Simple_repeat	(TG)n	Simple_repeat	chr6(TG)n70335566	NonProperStrand	1	1	-inf
chrX	71517869	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	chr1	145626058	145626138	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-2.3496
chr9	21490460	21490476	protein_coding	Smarca4	exon	ENSMUSG00000032187	ProperStrand	196	chr9	120040159	120040204	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	1	-7.1628
chr7	25844054	25844094	protein_coding	Grik5	exon	ENSMUSG00000003378	ProperStrand	13	chr4	131908685	131908750	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-16.7675
chr3	100735459	100735476	protein_coding	Trim45	exon	ENSMUSG00000033233	ProperStrand	59	chr19	10298983	10299045	protein_coding	Gm98	exon	ENSMUSG00000036098	ProperStrand	26	1	-15.0358
chr8	90027650	90027677	lincRNA	C230036H16Rik	exon	ENSMUSG00000091862	ProperStrand	8	chr5	74489595	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	3	-17.6375
chr15	78237232	78237248	protein_coding	Mpst	utr5	ENSMUSG00000071711	ProperStrand	7	chr11	77996557	77996621	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	2	-16.6444
chr6	63005706	63005722	LINE	L1Md_F2	L1	chr6L1Md_F263005193	ProperStrand	2	chr18	35716698	35716761	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-9.2832
chr19	57435752	57435769	protein_coding	Fam160b1	utr5	ENSMUSG00000033478	ProperStrand	49	chr2	26493411	26493433	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-4.1229
chr8	27689146	27689166	SINE	B4A	B4	chr8B4A27689137	ProperStrand	1	chr1	13164987	13165067	protein_coding	Ncoa2	exon	ENSMUSG00000005886	ProperStrand	26	1	-inf
chr12	70259673	70259698	protein_coding	Rps29	exon	ENSMUSG00000034892	ProperStrand	124	chr18	35716786	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.0901
chr11	119821554	119842143	protein_coding	Baiap2	exon	ENSMUSG00000025372	ProperStrand	9	chr10	23505152	23505254	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-11.3309
chr4	154010843	154010860	protein_coding	Prdm16	utr5	ENSMUSG00000039410	ProperStrand	44	chr10	23505150	23505270	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.6830
chr13	46765144	46765160	protein_coding	C78339	exon	ENSMUSG00000069237	NonProperStrand	104	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.9938
chr17	34761667	34761684	processed_transcript	Gm20460	.	ENSMUSG00000092176	ProperStrand	1	chr10	80238837	80238886	protein_coding	Dot1l	intron	ENSMUSG00000061589	ProperStrand	48	1	-inf
chr4	100827648	100827720	protein_coding	Jak1	exon	ENSMUSG00000028530	ProperStrand	30	chr10	23505152	23505221	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.3011
chr7	112533562	112533579	protein_coding	Fam160a2	exon	ENSMUSG00000044465	ProperStrand	85	chr3	121160744	121160843	protein_coding	Cnn3	utr3	ENSMUSG00000053931	ProperStrand	77	1	-12.1118
chr6	124665505	124665523	protein_coding-noncoding	Phb2	utr5	ENSMUSG00000004264	ProperStrand	8	chr13	51743580	51743660	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	3	-19.1285
chr15	95050371	95050387	protein_coding	Nell2	utr3	ENSMUSG00000022454	ProperStrand	64	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-7.1057
chr2	180988822	180988839	protein_coding	Gmeb2	exon	ENSMUSG00000038705	NonProperStrand	3	chr9	120038530	120038551	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-9.2011
chr11	78331649	78331667	protein_coding	Poldip2	exon	ENSMUSG00000001100	ProperStrand	10	chr11	98878344	98878417	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-9.9219
chr18	6595228	6595318	LTR	RMER17B	ERVK	chr18RMER17B6594860	ProperStrand	1	chr18	6595487	6595567	LTR	RMER17B	ERVK	chr18RMER17B6595410	ProperStrand	1	1	-inf
chr14	30913954	30913970	protein_coding	Cacna1d	exon	ENSMUSG00000015968	ProperStrand	16	chr16	23111770	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-7.2124
chr5	121655021	121655155	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	chr3	95980296	95980321	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	9	-2.4819
chr4	137298165	137298244	protein_coding	Alpl	utr3	ENSMUSG00000028766	ProperStrand	80	chr7	134671388	134671478	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-7.2985
chr19	8982355	8989261	protein_coding	Ganab	exon	ENSMUSG00000071650	ProperStrand	145	chr19	8963085	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	5	-6.1245
chr11	69266813	69266830	protein_coding	Dnahc2	exon	ENSMUSG00000005237	ProperStrand	95	chr12	106269284	106269384	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	2	-5.6256
chr11	87240282	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	chr4	131866644	131866660	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	1	-6.7995
chr1	135600071	135600151	protein_coding	Atp2b4	utr3	ENSMUSG00000026463	ProperStrand	42	chr5	115940316	115940406	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	1	-9.4529
chr3	153575117	153575156	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	chr9	120039557	120039657	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	4	-1.4258
chr14	25228112	25228131	LTR	ETnERV2-int	ERVK	chr14ETnERV2-int25227925	NonProperStrand	14	chr15	79136866	79137791	protein_coding	Pla2g6	exon	ENSMUSG00000042632	ProperStrand	32	1	-17.5529
chr9	44195830	44195913	protein_coding	Hyou1	exon	ENSMUSG00000032115	ProperStrand	145	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-5.2496
chr12	112661567	112661586	protein_coding	1200009I06Rik	intron	ENSMUSG00000021280	NonProperStrand	15	chr4	131865867	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.2332
chr14	78901999	78902793	protein_coding	Akap11	exon	ENSMUSG00000022016	ProperStrand	44	chr17	35299562	35299642	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-5.3796
chr9	108860230	108860403	protein_coding	Col7a1	exon	ENSMUSG00000025650	ProperStrand	33	chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	2	-12.2605
chr3	4339081	4339117	rRNA	n-R5s194	.	ENSMUSG00000077912	ProperStrand	24	chr2	91436233	91436333	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	2	-14.8346
chr7	134671418	134671518	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	chr11	77995190	77995252	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	2	-2.5066
chr5	102317200	102317300	protein_coding	Wdfy3	exon	ENSMUSG00000043940	ProperStrand	45	chr16	23110489	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.9643
chr9	14639196	14639272	protein_coding	Mre11a	utr3	ENSMUSG00000031928	ProperStrand	20	chr4	131908689	131908748	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-13.7520
chr8	87483968	87489045	protein_coding	Rnaseh2a	exon	ENSMUSG00000052926	ProperStrand	14	chr9	15119647	15119737	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	4	-17.0209
chr9	4299367	4302483	protein_coding	Aasdhppt	exon	ENSMUSG00000025894	ProperStrand	121	chr5	121655099	121655151	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.4917
chr10	80616320	80616379	protein_coding	Pias4	utr3	ENSMUSG00000004934	ProperStrand	43	chr15	34370545	34370605	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	5	-17.2491
chr11	45723144	45723160	protein_coding	Clint1	utr3	ENSMUSG00000006169	NonProperStrand	273	chr16	32243821	32243865	snoRNA	ENSMUSG00000080440_SNORA79	.	ENSMUSG00000080440	ProperStrand	140	1	-8.5794
chr18	8463556	8463608	LINE	Lx2	L1	chr18Lx28462717	NonProperStrand	2	chr1	162965539	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-10.5602
chr4	118037670	118037735	protein_coding	Szt2	exon	ENSMUSG00000033253	ProperStrand	23	chr6	148877128	148879142	protein_coding	Fam60a	exon	ENSMUSG00000039985	ProperStrand	68	1	-14.9903
chr2	157119950	157120991	protein_coding	Rpn2	exon	ENSMUSG00000027642	ProperStrand	363	chr7	52382789	52382852	protein_coding	Rpl13a	intron	ENSMUSG00000074129	ProperStrand	269	1	-6.7192
chr4	124132209	124132225	lincRNA	1700057H15Rik	intron	ENSMUSG00000084757	ProperStrand	40	chr2	130101258	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-7.3987
chrX	92262913	92262931	protein_coding	Arhgef9	intron	ENSMUSG00000025656	NonProperStrand	2	chr7	52381719	52381762	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-15.0308
chr5	34234244	34234262	protein_coding	Whsc1	utr5	ENSMUSG00000057406	ProperStrand	409	chr3	19126854	19126924	protein_coding	Pde7a	utr3	ENSMUSG00000069094	ProperStrand	12	1	-12.7520
chr1	162968441	162968463	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	chr7	16524110	16524204	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	2	-4.7123
chr2	121803147	121804659	protein_coding	Ctdspl2	exon	ENSMUSG00000033411	ProperStrand	11	chr16	23110907	23110987	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.6241
chr18	10052132	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr19	18745537	18745554	protein_coding	2410127L17Rik	exon	ENSMUSG00000024726	ProperStrand	43	1	-9.4706
chr5	137943088	137943139	protein_coding	Pop7	exon	ENSMUSG00000029715	ProperStrand	3	chr2	41199972	41199989	protein_coding	Lrp1b	exon	ENSMUSG00000049252	ProperStrand	376	2	-20.4410
chr5	92875347	92875364	protein_coding	Scarb2	exon	ENSMUSG00000029426	ProperStrand	30	chr16	23110841	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0481
chr15	98676305	98676359	protein_coding	Mll2	exon	ENSMUSG00000048154	ProperStrand	170	chr11	60001911	60001927	protein_coding	Rai1	exon	ENSMUSG00000062115	NonProperStrand	81	1	-10.6205
chr13	13579010	13581313	protein_coding	Nid1	exon	ENSMUSG00000005397	ProperStrand	112	chr11	50110626	50110862	protein_coding	Canx	exon	ENSMUSG00000020368	ProperStrand	296	1	-8.8637
chr15	82990782	82990819	protein_coding	Cyb5r3	exon	ENSMUSG00000018042	ProperStrand	22	chr4	131908715	131908752	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-4.9672
chr8	72287172	72287188	protein_coding	Zfp866	utr3	ENSMUSG00000043090	NonProperStrand	134	chr5	130295415	130295482	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-3.7189
chr5	104735049	104738296	protein_coding	Ibsp	exon	ENSMUSG00000029306	ProperStrand	15	chr9	120039533	120039622	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	4	-18.7706
chr5	99372453	99372470	protein_coding	Prkg2	exon	ENSMUSG00000029334	ProperStrand	22	chr7	4745712	4745743	protein_coding	Rpl28	exon	ENSMUSG00000030432	ProperStrand	220	1	-12.7415
chr4	132617672	132621288	protein_coding	Ahdc1	exon	ENSMUSG00000037692	ProperStrand	100	chr4	131865855	131865980	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-3.3148
chr16	11518516	11518533	protein_coding	Snx29	intron	ENSMUSG00000071669	ProperStrand	10	chr7	29136525	29136569	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.7572
chr3	136386733	136386833	protein_coding	Ppp3ca	intron	ENSMUSG00000028161	ProperStrand	45	chr16	23111389	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	11	-19.5805
chr2	32781398	32781416	protein_coding	Lrsam1	utr3	ENSMUSG00000026792	ProperStrand	80	chr5	121655016	121655126	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-5.5227
chr2	129998643	129998709	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	4	-20.2095
chr11	60535265	60535337	protein_coding	Flii	exon	ENSMUSG00000002812	ProperStrand	42	chr3	123210854	123210903	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	7	-18.3363
chr6	119876009	119876089	protein_coding	Wnk1	utr3	ENSMUSG00000045962	ProperStrand	221	chrX	71517861	71517951	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-4.0229
chr7	67123694	67123759	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	chr7	118219574	118219624	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-1.0450
chr3	65931637	65931654	protein_coding	Veph1	intron	ENSMUSG00000027831	ProperStrand	12	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-11.0125
chr17	35971145	35971903	protein_coding	Tubb5	utr3	ENSMUSG00000001525	ProperStrand	624	chr4	131866155	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-0.7469
chr2	121949510	121949526	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	chr2	110617527	110617614	protein_coding	Ano3	intron	ENSMUSG00000074968	ProperStrand	10	1	-13.9622
chr2	165908115	165908134	protein_coding	Sulf2	exon	ENSMUSG00000006800	ProperStrand	171	chr18	63908609	63908625	protein_coding	Wdr7	intron	ENSMUSG00000040560	NonProperStrand	180	2	-14.2802
chr1	138382212	138382230	protein_coding	Kif14	intron	ENSMUSG00000041498	NonProperStrand	36	chr9	64024489	64024567	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	3	-20.0857
chr9	62992379	62992395	protein_coding	Skor1	exon	ENSMUSG00000022245	NonProperStrand	70	chr11	69482449	69482469	snoRNA	ENSMUSG00000089542_snoU6-77	.	ENSMUSG00000089542	ProperStrand	138	1	-11.3317
chr10	75741241	75741283	protein_coding	Dip2a	exon	ENSMUSG00000020231	ProperStrand	25	chr10	23505152	23505215	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.6150
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr15	83770046	83770063	protein_coding	Efcab6	intron	ENSMUSG00000022441	ProperStrand	60	1	-7.7952
chr8	73202378	73202418	protein_coding	Lsm4	utr3	ENSMUSG00000031848	ProperStrand	19	chr11	116533822	116533892	snoRNA	ENSMUSG00000065640_Snord1c	.	ENSMUSG00000065640	ProperStrand	373	1	-11.9848
chr17	29628743	29628843	protein_coding	Pim1	exon	ENSMUSG00000024014	ProperStrand	13	chr8	129468746	129468769	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-7.4499
chr11	48614010	48614065	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	1	-6.7789
chr2	83643076	83643106	protein_coding	Itgav	exon	ENSMUSG00000027087	ProperStrand	59	chr8	129468789	129468879	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	3	-10.6662
chr2	34629561	34629609	protein_coding	Hspa5	exon	ENSMUSG00000026864	ProperStrand	181	chr4	131908361	131908451	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-1.1527
chr14	32479927	32479943	protein_coding	Btd	exon	ENSMUSG00000021900	NonProperStrand	74	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-2.7386
chr10	114547418	114547435	protein_coding	Tph2	intron	ENSMUSG00000006764	ProperStrand	8	chr5	115939530	115939557	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-11.9945
chr4	46554809	46554826	protein_coding	Coro2a	exon	ENSMUSG00000028337	NonProperStrand	24	chr7	50847378	50847394	protein_coding	Zfp719	utr3	ENSMUSG00000030469	NonProperStrand	1	1	-inf
chr1	46132859	46132881	protein_coding	Dnahc7b	intron	ENSMUSG00000041144	NonProperStrand	57	chr14	31827478	31827545	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-7.0467
chr1	102076760	102076793	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	chr17	13112481	13112528	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-1.2617
chr9	7953132	7962302	protein_coding	Yap1	exon	ENSMUSG00000053110	NonProperStrand	7	chr5	130300420	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-6.6707
chr4	41673405	41673421	protein_coding	Il11ra1	intron	ENSMUSG00000073889	ProperStrand	128	chr2	32818883	32818935	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-4.0176
chr6	113103111	113103172	protein_coding	Setd5	utr3	ENSMUSG00000034269	ProperStrand	162	chr9	120039584	120039674	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.6444
chr1	95317990	95319905	protein_coding	Hdlbp	exon	ENSMUSG00000034088	ProperStrand	97	chr7	116664808	116664898	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.7622
chr1	173269059	173270421	protein_coding	Dedd	exon	ENSMUSG00000013973	ProperStrand	17	chr4	131908809	131908863	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.3002
chr1	187112026	187113284	protein_coding	Iars2	exon	ENSMUSG00000026618	ProperStrand	68	chr19	8963096	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.0686
chr5	148113281	148113297	protein_coding	Cdx2	utr3	ENSMUSG00000029646	ProperStrand	276	chr1	162965531	162965584	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-1.7871
chr15	76736627	76736664	protein_coding	Rpl8	exon	ENSMUSG00000003970	ProperStrand	191	chr7	138174403	138174419	protein_coding	Fgfr2	intron	ENSMUSG00000030849	NonProperStrand	95	1	-10.0674
chr7	137903096	137903466	protein_coding	Tacc2	exon	ENSMUSG00000030852	ProperStrand	95	chr11	68887021	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-3.2914
chr7	29839970	29840070	protein_coding	Ryr1	exon	ENSMUSG00000030592	ProperStrand	27	chr10	110918665	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-4.9663
chr13	21809853	21809936	protein_coding	Hist1h3h	exon	ENSMUSG00000069312	ProperStrand	10	chr4	131865859	131865949	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	7	-inf
chr4	131866172	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	chrX	71517866	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	8	-1.1460
chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	chr18	74938307	74938366	snoRNA	ENSMUSG00000089235_SCARNA17	.	ENSMUSG00000089235	ProperStrand	1128	1	-2.1930
chr3	156224612	156224628	lincRNA	4930570G19Rik	exon	ENSMUSG00000085084	ProperStrand	326	chr8	74775736	74776748	protein_coding	Ap1m1	exon	ENSMUSG00000003033	ProperStrand	4	1	-15.5977
chr1	194571806	194571880	snRNA	ENSMUSG00000064881_U5	.	ENSMUSG00000064881	ProperStrand	187	chr1	63225607	63225697	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-4.4554
chr17	95214731	95214831	LTR	ORR1A4	MaLR	chr17ORR1A495214676	ProperStrand	2	chr9	15118323	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-10.7700
chr8	106472561	106472580	SINE	B3A	B2	chr8B3A106472512	NonProperStrand	1	chrX	159212524	159212545	protein_coding	Rbbp7	exon	ENSMUSG00000031353	ProperStrand	48	1	-inf
chr13	56983171	56983188	protein_coding	Trpc7	intron	ENSMUSG00000021541	ProperStrand	50	chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-6.8159
chr1	88423316	88423437	protein_coding	Ptma	utr5	ENSMUSG00000026238	ProperStrand	385	chr8	125748839	125748855	protein_coding	Cdk10	exon	ENSMUSG00000033862	NonProperStrand	2	1	-17.2715
chr12	103237590	103237670	protein_coding	Cpsf2	exon	ENSMUSG00000041781	ProperStrand	9	chr5	92485086	92485165	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	2	-18.6957
chr7	17019522	17019578	protein_coding	Zc3h4	exon	ENSMUSG00000059273	ProperStrand	95	chr4	131908236	131908293	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-1.6753
chr17	23955822	23955839	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	chr5	116012489	116012536	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	5	-inf
chr2	34749641	34749731	protein_coding	Phf19	utr3	ENSMUSG00000026873	ProperStrand	8	chr9	120039570	120039650	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-7.2948
chr12	105709531	105709547	protein_coding	Gsc	utr3	ENSMUSG00000021095	ProperStrand	12	chr11	62416991	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-9.2944
chr11	78033491	78033581	protein_coding	Supt6h	exon	ENSMUSG00000002052	ProperStrand	119	chr12	104317206	104317223	protein_coding	Unc79	exon	ENSMUSG00000021198	ProperStrand	99	2	-17.1099
chr17	32487073	32487091	protein_coding	Akap8l	intron	ENSMUSG00000002625	NonProperStrand	1	chr4	120437998	120438049	protein_coding	Nfyc	intron	ENSMUSG00000032897	ProperStrand	4	1	-inf
chr10	80049215	80049277	protein_coding	Fam108a	intron	ENSMUSG00000003346	ProperStrand	14	chr17	36000485	36000501	protein_coding	Nrm	exon	ENSMUSG00000059791	ProperStrand	253	2	-inf
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chrX	53609291	53609309	protein_coding	Zfp449	intron	ENSMUSG00000073176	NonProperStrand	7	1	-13.0304
chrX	166414931	166419852	protein_coding	Mid1	exon	ENSMUSG00000035299	ProperStrand	209	chr1	71341491	71341508	protein_coding	Abca12	exon	ENSMUSG00000050296	NonProperStrand	143	1	-9.0695
chr10	18393547	18393563	protein_coding	D10Bwg1379e	intron	ENSMUSG00000019852	NonProperStrand	120	chr1	174492230	174492246	protein_coding	Vsig8	exon	ENSMUSG00000049598	ProperStrand	27	1	-13.5366
chr5	34813748	34813767	protein_coding	Fam193a	intron	ENSMUSG00000037210	NonProperStrand	2	chr6	87950415	87950473	protein_coding	Rab7	utr3	ENSMUSG00000079477	ProperStrand	33	1	-19.7718
chr15	99137024	99137329	protein_coding	Prpf40b	exon	ENSMUSG00000023007	ProperStrand	5	chr7	116663712	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-7.4047
chr11	77891895	77891948	protein_coding	Eral1	intron	ENSMUSG00000020832	ProperStrand	8	chr2	35036365	35036405	protein_coding	Rab14	utr3	ENSMUSG00000026878	ProperStrand	21	1	-18.3903
chr2	90235293	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr18	63109676	63109692	protein_coding	Apcdd1	exon	ENSMUSG00000071847	NonProperStrand	254	5	-9.4992
chr9	59526555	59526598	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr9	99483993	99484009	protein_coding	Dbr1	exon	ENSMUSG00000032469	ProperStrand	162	1	-5.2263
chr5	130053123	130053147	protein_coding	Sfswap	intron	ENSMUSG00000029439	ProperStrand	34	chr15	82725605	82725636	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	1	-9.6654
chr1	173263452	173263552	protein_coding	Dedd	intron	ENSMUSG00000013973	ProperStrand	17	chr9	120039625	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-5.7441
chr11	119759273	119759344	protein_coding	Rptor	utr3	ENSMUSG00000025583	ProperStrand	76	chr1	89307328	89307389	protein_coding	Gigyf2	exon	ENSMUSG00000048000	ProperStrand	128	3	-19.2124
chr9	40612830	40612922	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	chr9	15118335	15118380	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	5	-4.5704
chr1	89377777	89377793	protein_coding	Ngef	exon	ENSMUSG00000026259	NonProperStrand	41	chr17	35299564	35299631	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	2	-9.0434
chr15	101917056	101919101	protein_coding	Eif4b	exon	ENSMUSG00000058655	ProperStrand	484	chr9	15119986	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-3.2410
chrX	102569259	102569275	lincRNA	5330434G04Rik	exon	ENSMUSG00000087620	ProperStrand	29	chr18	35714144	35714205	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.8207
chr12	88302895	88302936	protein_coding	2310044G17Rik	exon	ENSMUSG00000034157	ProperStrand	48	chr7	117189903	117189932	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.7442
chr3	76825059	76825149	LINE	L1Md_F2	L1	chr3L1Md_F276825027	ProperStrand	1	chr14	34781276	34781366	protein_coding	Zfp488	utr3	ENSMUSG00000044519	ProperStrand	54	1	-inf
chr7	130416532	130416581	protein_coding	Slc5a11	exon	ENSMUSG00000030769	ProperStrand	87	chr7	116664821	116664868	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.9327
chr4	83131733	83131761	protein_coding	Psip1	utr5	ENSMUSG00000028484	ProperStrand	104	chr8	73153759	73153859	protein_coding	Gdf15	exon	ENSMUSG00000038508	ProperStrand	8	1	-16.3360
chr1	75167299	75167557	protein_coding	Zfand2b	exon	ENSMUSG00000026197	ProperStrand	3	chr4	131908688	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-12.0505
chr6	113071719	113102522	protein_coding	Setd5	utr3	ENSMUSG00000034269	ProperStrand	162	chr10	23505152	23505277	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-1.1099
chr4	43505784	43505848	protein_coding-noncoding	Ccdc107	utr5	ENSMUSG00000028461	ProperStrand	106	chr2	144091738	144091828	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	NonProperStrand	4	1	-17.7101
chr11	77995047	77996337	protein_coding	Rpl23a	exon	ENSMUSG00000058546	ProperStrand	121	chr3	108357268	108357358	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-3.2316
chr9	120483244	120483303	protein_coding	Rpl14	exon	ENSMUSG00000025794	ProperStrand	123	chr2	158182180	158182276	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-3.6420
chrX	148007024	148007104	protein_coding	Phf8	exon	ENSMUSG00000041229	ProperStrand	17	chr8	129468746	129468836	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	2	-11.1868
chr2	63936035	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr9	64143746	64143796	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-2.5766
chr9	66877486	66877534	protein_coding	Tpm1	exon	ENSMUSG00000032366	ProperStrand	23	chr9	65049531	65049576	snRNA	ENSMUSG00000075930_U5	.	ENSMUSG00000075930	ProperStrand	175	5	-18.9832
chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	chr11	95625039	95625090	protein_coding	Zfp652	exon	ENSMUSG00000075595	ProperStrand	48	1	-8.9520
chr5	115195481	115195557	protein_coding	Git2	exon	ENSMUSG00000041890	ProperStrand	20	chr16	23110990	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.6223
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr15	79913288	79913347	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	4	-3.2419
chr2	156376948	156377038	protein_coding	0610011L14Rik	exon	ENSMUSG00000027628	ProperStrand	9	chr15	34370588	34370668	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	5	-21.7735
chr15	84062572	84062595	protein_coding	Parvb	exon	ENSMUSG00000022438	ProperStrand	127	chr7	117189973	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.0361
chr11	120825125	120825175	protein_coding	Csnk1d	utr3	ENSMUSG00000025162	ProperStrand	37	chr6	134029351	134029368	protein_coding	Etv6	intron	ENSMUSG00000030199	ProperStrand	46	1	-14.8352
chr3	115493390	115493408	SINE	B4	B4	chr3B4115493314	ProperStrand	1	chr16	16323855	16324068	protein_coding	Dnm1l	exon	ENSMUSG00000022789	NonProperStrand	38	1	-inf
chr5	80073369	80073386	LTR	MTE2a	MaLR	chr5MTE2a80073368	ProperStrand	1	chr2	26493466	26493521	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	1	-inf
mmu-miR-2137	1	21	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	chr7	52309977	52309993	protein_coding	Prrg2	exon	ENSMUSG00000007837	NonProperStrand	281	1	-8.4658
chr9	120037900	120038050	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	chr15	98350165	98350280	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	20	-5.8033
chr1	75133135	75133201	protein_coding	1810031K17Rik	exon	ENSMUSG00000033159	ProperStrand	24	chr18	35102297	35102367	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	10	-20.4826
chr4	125318827	125326929	protein_coding	Grik3	exon	ENSMUSG00000001985	ProperStrand	126	chr1	90164527	90164572	protein_coding	Hjurp	exon	ENSMUSG00000044783	ProperStrand	110	1	-10.6064
chr7	133940934	133941034	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	chr8	126554592	126554626	protein_coding	Urb2	exon	ENSMUSG00000031976	ProperStrand	64	3	-18.1794
chr2	129998643	129998713	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr4	122968583	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	4	-6.3115
chr1	72871182	72871260	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	chr1	88252838	88252878	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	3	-7.6191
chr5	124236228	124236318	protein_coding	Kntc1	exon	ENSMUSG00000029414	ProperStrand	27	chr2	113982677	113982757	protein_coding	Aqr	intron	ENSMUSG00000040383	ProperStrand	70	1	-14.6204
chr8	124116092	124116172	protein_coding	Map1lc3b	intron	ENSMUSG00000031812	ProperStrand	57	chr12	106269445	106269535	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	46	-19.6068
chr5	145886607	145886813	protein_coding	Arpc1b	exon	ENSMUSG00000029622	ProperStrand	17	chr15	5068444	5068480	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-8.5996
chr9	62645460	62645528	protein_coding	Fem1b	exon	ENSMUSG00000032244	ProperStrand	111	chr5	130295428	130295518	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	6	-19.3072
chr11	75166271	75166361	protein_coding	Smyd4	intron	ENSMUSG00000018809	ProperStrand	11	chr15	79908939	79908956	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-8.8923
chr17	46814084	46814100	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr2	130101241	130101272	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-2.7331
chr9	8592491	8592508	protein_coding	Trpc6	intron	ENSMUSG00000031997	NonProperStrand	6	chr19	8963081	8963183	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-6.7266
chr2	90235294	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	127947624	127947640	protein_coding	Esyt1	utr3	ENSMUSG00000025366	NonProperStrand	32	1	-5.6851
chr11	106675368	106675413	protein_coding	Ccdc45	intron	ENSMUSG00000018372	ProperStrand	17	chr3	123210853	123210877	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-4.3464
chr19	59502725	59502741	antisense	Emx2os	.	ENSMUSG00000087095	ProperStrand	3	chr2	89368462	89368479	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	1	-16.7811
chr1	40164500	40164520	protein_coding	Il1r2	intron	ENSMUSG00000026073	ProperStrand	2	chr4	131908236	131908287	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-8.3123
chr8	107035925	107035952	protein_coding	Nae1	intron	ENSMUSG00000031878	ProperStrand	13	chr8	73419657	73419783	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	4	-18.9870
chrX	123891615	123891635	LTR	RLTR20A	ERVK	chrXRLTR20A123891413	ProperStrand	5	chr10	127523387	127525378	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	5	-inf
chr10	118813583	118813604	LTR	MLT1A0	MaLR	chr10MLT1A0118813580	ProperStrand	1	chr5	108336363	108336383	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-inf
chr8	36532288	36532313	protein_coding	Eri1	exon	ENSMUSG00000031527	ProperStrand	6	chr16	26504951	26504967	protein_coding	Tmem207	exon	ENSMUSG00000091972	NonProperStrand	34	1	-18.2219
chrX	156315499	156315519	protein_coding	Sh3kbp1	intron	ENSMUSG00000040990	ProperStrand	67	chr15	79908930	79908955	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-5.2575
chr17	51059909	51059925	protein_coding	Tbc1d5	exon	ENSMUSG00000023923	NonProperStrand	51	chr16	23110912	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.0517
chr4	46047388	46047413	protein_coding	Tdrd7	utr3	ENSMUSG00000035517	ProperStrand	2	chr8	73419657	73419712	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-10.3981
chr9	118466123	118466203	protein_coding	Golga4	exon	ENSMUSG00000038708	ProperStrand	95	chr7	28049894	28049984	protein_coding	Numbl	exon	ENSMUSG00000063160	ProperStrand	35	5	-inf
chr12	17552949	17553012	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr1	39605590	39605629	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	5	-3.4973
chr18	65783754	65848183	protein_coding	Zfp532	utr3	ENSMUSG00000042439	ProperStrand	24	chr5	130300473	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-7.0445
chr15	100358955	100358972	protein_coding	Tfcp2	exon	ENSMUSG00000009733	NonProperStrand	77	chr6	125084611	125084678	protein_coding	Nop2	exon	ENSMUSG00000038279	ProperStrand	39	1	-13.6788
chr1	162968451	162968511	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	chr9	64143745	64143877	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	15	-19.7427
chr12	102154882	102154903	protein_coding	Ccdc88c	exon	ENSMUSG00000021182	ProperStrand	151	chr4	83938091	83938107	protein_coding	Bnc2	exon	ENSMUSG00000028487	ProperStrand	76	1	-10.9856
chr17	85412937	85412964	protein_coding	Ppm1b	exon	ENSMUSG00000061130	ProperStrand	36	chr3	88341933	88341960	protein_coding	Mex3a	utr3	ENSMUSG00000074480	ProperStrand	7	1	-18.6891
chr10	127152705	127152721	protein_coding	Myo1a	exon	ENSMUSG00000025401	ProperStrand	93	chr19	9042820	9042861	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	1	-8.5865
chr11	60270118	60272948	protein_coding	Drg2	exon	ENSMUSG00000020537	ProperStrand	13	chr9	120038613	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.9817
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr2	26494708	26494800	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	15	-15.8493
chr19	11015616	11015632	protein_coding	Gpr44	exon	ENSMUSG00000034117	NonProperStrand	118	chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	1	-10.0768
chr14	66475598	66475688	protein_coding	Ccdc25	exon	ENSMUSG00000022035	ProperStrand	15	chr11	98878367	98878457	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-9.0781
chr2	130102344	130102448	protein_coding-noncoding	Nop56	utr5	ENSMUSG00000027405	ProperStrand	19	chr11	97642952	97642984	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.5938
chr16	26858886	26858976	LTR	BGLII_Mus	ERVK	chr16BGLII_Mus26858859	NonProperStrand	1	chr16	26859106	26859186	LTR	BGLII_Mus	ERVK	chr16BGLII_Mus26859092	NonProperStrand	1	1	-inf
chr2	150231824	150231891	LTR	MTB	MaLR	chr2MTB150231476	ProperStrand	1	chr7	54107307	54107326	protein_coding	Ldha	exon	ENSMUSG00000063229	ProperStrand	280	1	-inf
chr19	19955776	19955800	LINE	Lx9	L1	chr19Lx919955757	ProperStrand	1	chr9	64022856	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-inf
chr11	69486864	69486921	protein_coding	Senp3	utr3	ENSMUSG00000005204	ProperStrand	65	chr6	120338060	120338076	protein_coding	Kdm5a	exon	ENSMUSG00000030180	ProperStrand	57	1	-13.2555
chr4	119863211	119863301	SINE	MIR	MIR	chr4MIR119863217	ProperStrand	1	chr4	119863383	119863463	SINE	MIR	MIR	chr4MIR119863388	ProperStrand	1	1	-inf
chr2	9985901	9985917	protein_coding	Atp5c1	exon	ENSMUSG00000025781	ProperStrand	138	chr1	88252835	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-5.0099
chr15	74788929	74788981	protein_coding	Ly6e	exon	ENSMUSG00000022587	ProperStrand	21	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	2	-15.5700
mmu-miR-2137	0	20	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	chr11	62416969	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-4.3480
chr11	120422001	120422083	protein_coding	P4hb	utr3	ENSMUSG00000025130	NonProperStrand	4	chr6	115757989	115758042	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	NonProperStrand	4	2	-inf
chr11	68915301	68915345	protein_coding	Per1	exon	ENSMUSG00000020893	ProperStrand	46	chr4	131865855	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.1947
chr4	154999017	154999683	protein_coding	Cdk11b	utr5	ENSMUSG00000029062	ProperStrand	92	chr11	57873204	57873229	protein_coding	Larp1	utr3	ENSMUSG00000037331	ProperStrand	201	1	-10.0299
chr19	6255417	6255465	protein_coding	Atg2a	exon	ENSMUSG00000024773	ProperStrand	97	chr16	38158093	38158168	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	7	-inf
chr5	106040860	106040877	protein_coding	Lrrc8c	utr3	ENSMUSG00000054720	NonProperStrand	12	chr15	98350174	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-7.9765
chr4	131908363	131908410	lincRNA	Gm17300	exon	ENSMUSG00000091021	ProperStrand	109	chr18	75161537	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	NonProperStrand	1	1	-inf
chrX	6742779	6742830	protein_coding	Clcn5	exon	ENSMUSG00000004317	ProperStrand	7	chr2	132403369	132403387	protein_coding	Gpcpd1	intron	ENSMUSG00000027346	ProperStrand	17	1	-20.3967
chr19	10669819	10669871	protein_coding	Dak	exon	ENSMUSG00000034371	ProperStrand	12	chr7	116664794	116664842	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-13.3147
chr19	46446534	46446714	protein_coding	Tmem180	exon	ENSMUSG00000025227	NonProperStrand	3	chr2	104857112	104857164	protein_coding	Ccdc73	intron	ENSMUSG00000045106	ProperStrand	13	1	-inf
chr19	8800355	8800473	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	chrX	113862540	113862570	snoRNA	ENSMUSG00000088518_SNORA9	.	ENSMUSG00000088518	ProperStrand	280	1	-1.0439
chr1	174437281	174437330	protein_coding	Tagln2	utr3	ENSMUSG00000026547	ProperStrand	39	chr16	23110548	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.2225
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr11	99885311	99885327	protein_coding	Krt33b	exon	ENSMUSG00000057723	NonProperStrand	352	1	-2.5933
chrX	137828145	137828161	protein_coding	Col4a6	intron	ENSMUSG00000031273	ProperStrand	8	chr7	116663633	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-6.3908
chr2	121693131	121693231	protein_coding	Casc4	exon	ENSMUSG00000060227	ProperStrand	18	chr19	44188492	44188545	snoRNA	ENSMUSG00000077391_SNORA12	.	ENSMUSG00000077391	ProperStrand	506	1	-11.4859
chr13	44997734	44997824	protein_coding	Jarid2	exon	ENSMUSG00000038518	ProperStrand	372	chr5	108334237	108334317	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	12	-19.7509
chr12	72419341	72419431	protein_coding	Dact1	exon	ENSMUSG00000044548	ProperStrand	11	chr18	35716770	35716850	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-5.3336
chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-3.4880
chr11	4785107	4785125	protein_coding	Nipsnap1	intron	ENSMUSG00000034285	ProperStrand	15	chr10	127895517	127895568	tRNA	tRNA688-SerCGA	.	961326	ProperStrand	71	1	-15.8048
chr1	34502444	34502521	protein_coding	Imp4	utr3	ENSMUSG00000026127	ProperStrand	5	chr4	131865913	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-10.8861
chr11	90483088	90483513	protein_coding	Stxbp4	utr5	ENSMUSG00000020546	ProperStrand	15	chr4	117883099	117883236	protein_coding	Ptprf	exon	ENSMUSG00000033295	ProperStrand	337	1	-12.6764
chr11	69219054	69219072	protein_coding	Kdm6b	exon	ENSMUSG00000018476	ProperStrand	76	chr2	26494777	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.6885
chr2	158182156	158182177	lincRNA	9430008C03Rik	intron	ENSMUSG00000085385	ProperStrand	1039	chr5	115574850	115574950	protein_coding	Unc119b	utr3	ENSMUSG00000046562	ProperStrand	20	1	-9.8331
chr5	108334259	108336490	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	chr11	77995189	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	15	-10.4839
chr11	78059298	78059314	protein_coding	Supt6h	utr5	ENSMUSG00000002052	ProperStrand	119	chr12	17552962	17552995	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	2	-6.3878
chr5	115697262	115698622	protein_coding	Rnf10	exon	ENSMUSG00000041740	ProperStrand	95	chr15	98350141	98350231	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-3.8881
chr9	110289346	110289390	protein_coding	Ptpn23	exon	ENSMUSG00000036057	ProperStrand	34	chr16	23111466	23111500	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.1231
chr13	98736735	98736754	protein_coding	Rgnef	intron	ENSMUSG00000021662	NonProperStrand	10	chr7	29136525	29136584	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.7572
chr2	84787083	84788511	protein_coding	Slc43a3	exon	ENSMUSG00000027074	ProperStrand	4	chr10	110918549	110918639	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-8.9646
chr1	33828651	33828669	protein_coding	Zfp451	intron	ENSMUSG00000042197	NonProperStrand	393	chr1	162965992	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-0.6958
chr3	38790074	38790090	protein_coding	Fat4	exon	ENSMUSG00000046743	NonProperStrand	13	chr5	121655016	121655127	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-6.7475
chr4	119100402	119100450	protein_coding	Zmynd12	intron	ENSMUSG00000070806	ProperStrand	2	chr7	50169368	50169386	protein_coding	Vmn2r63	intron	ENSMUSG00000090751	NonProperStrand	2	1	-inf
chr3	135268101	135268121	protein_coding	Nfkb1	exon	ENSMUSG00000028163	ProperStrand	55	chr10	82085750	82085767	protein_coding	1190007I07Rik	utr5	ENSMUSG00000063320	NonProperStrand	1	1	-inf
chr4	43580701	43580772	protein_coding	Gba2	exon	ENSMUSG00000028467	ProperStrand	7	chr9	51895494	51895525	protein_coding	Rdx	utr3	ENSMUSG00000032050	ProperStrand	60	3	-inf
chr10	80809668	80809684	protein_coding	Hmg20b	exon	ENSMUSG00000020232	ProperStrand	157	chr14	31827477	31827543	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-5.0585
chr1	58469082	58469122	protein_coding	Clk1	exon	ENSMUSG00000026034	ProperStrand	5	chr9	64022881	64022921	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-13.1832
chr15	34370545	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	chr15	79908930	79909020	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	17	-1.9469
chr1	17084411	17084432	protein_coding	Jph1	intron	ENSMUSG00000042686	NonProperStrand	4	chr5	145593354	145593371	protein_coding	Trrap	exon	ENSMUSG00000045482	ProperStrand	399	1	-15.1844
chr9	106363685	106363714	protein_coding	Pcbp4	exon	ENSMUSG00000023495	ProperStrand	36	chr11	62418058	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-6.5660
chr1	181067485	181067503	protein_coding	Smyd3	intron	ENSMUSG00000055067	NonProperStrand	190	chr19	8963027	8963127	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-2.3520
chr9	50816824	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	chr11	69481333	69481433	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	3	-5.3195
chr5	143733885	143734008	protein_coding	Fscn1	utr3	ENSMUSG00000029581	ProperStrand	200	chr19	8799053	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-3.5342
chr10	79145043	79145146	protein_coding	Cdc34	utr5	ENSMUSG00000020307	ProperStrand	30	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-8.3717
chr6	48410411	48410428	protein_coding	Sspo	exon	ENSMUSG00000029797	NonProperStrand	94	chr18	35716761	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-6.0975
chr12	111850619	111900834	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr16	23110828	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	28	-1.0655
chr3	107845135	107845164	protein_coding	Gstm4	exon	ENSMUSG00000027890	ProperStrand	4	chr19	8800375	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-14.8836
chr16	37777391	37777408	protein_coding	Fstl1	exon	ENSMUSG00000022816	ProperStrand	179	chr18	35714248	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-1.5972
chr1	162968212	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	chr16	18240811	18240886	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	1	-2.8407
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr19	8800385	8800470	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-1.1756
chr8	13416897	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr14	122368774	122368825	protein_coding	Ubac2	intron	ENSMUSG00000041765	ProperStrand	25	1	-8.2068
chr5	31234768	31234858	SINE	B2_Mm1a	B2	chr5B2_Mm1a31234738	NonProperStrand	1	chr4	146714531	146714611	lincRNA	Gm16889	intron	ENSMUSG00000084976	ProperStrand	2	1	-inf
chr14	70884606	70884623	protein_coding	Bmp1	intron	ENSMUSG00000022098	NonProperStrand	2	chr7	125670871	125670918	protein_coding	Coq7	exon	ENSMUSG00000030652	ProperStrand	3	1	-inf
chr8	108724511	108724586	protein_coding	Slc7a6os	utr3	ENSMUSG00000033106	ProperStrand	9	chr10	23505177	23505267	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.5477
chr7	51747575	51747634	protein_coding	2310044H10Rik	exon	ENSMUSG00000008140	ProperStrand	14	chr2	26493393	26493483	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-6.5906
chr11	69481372	69481428	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	chr8	34802315	34802416	snoRNA	ENSMUSG00000088856_SNORA48	.	ENSMUSG00000088856	ProperStrand	236	4	-4.7104
chr8	108432835	108432935	protein_coding	Pskh1	intron	ENSMUSG00000048310	ProperStrand	13	chr5	92485085	92485116	pseudogene	Gm15710	.	ENSMUSG00000084111	ProperStrand	28	1	-17.7351
chr8	74446729	74446745	protein_coding	Zfp617	intron	ENSMUSG00000066880	NonProperStrand	208	chr7	116664819	116664868	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-0.7426
chr15	76174866	76174883	protein_coding	Cyc1	exon	ENSMUSG00000022551	ProperStrand	47	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-7.4111
chr11	116016097	116016113	protein_coding	Fbf1	exon	ENSMUSG00000020776	NonProperStrand	36	chr6	81992905	81992922	protein_coding	Fam176a	intron	ENSMUSG00000035104	ProperStrand	64	1	-14.2132
chr11	87240292	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	chr4	131865413	131865506	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	5	-9.7357
chrX	82448620	82448661	protein_coding	Dmd	utr3	ENSMUSG00000045103	ProperStrand	38	chr9	120038469	120038559	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.8790
chr12	92811861	92811902	protein_coding	Gtf2a1	intron	ENSMUSG00000020962	ProperStrand	61	chr14	33005139	33005237	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-3.9625
chr16	37777391	37777408	protein_coding	Fstl1	exon	ENSMUSG00000022816	ProperStrand	179	chr7	52381719	52381772	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	2	-8.8672
chr4	41067645	41068060	protein_coding	Nol6	exon	ENSMUSG00000028430	ProperStrand	98	chr10	107800814	107800854	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	1	-7.0934
chr6	85415995	85416620	protein_coding	Cct7	exon	ENSMUSG00000030007	ProperStrand	173	chr19	8963043	8963123	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-0.7665
chr8	41511560	41511650	protein_coding	Zdhhc2	intron	ENSMUSG00000039470	ProperStrand	5	chr7	56597562	56597652	protein_coding	Nav2	intron	ENSMUSG00000052512	ProperStrand	106	1	-17.2464
chr9	64574503	64574606	protein_coding	Rab11a	exon	ENSMUSG00000004771	ProperStrand	27	chr9	15118328	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-4.9852
chr1	173433179	173433243	protein_coding	B930036N10Rik	utr3	ENSMUSG00000091993	ProperStrand	150	chr3	95980333	95980410	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	2	-8.3259
chr16	16333950	16334018	protein_coding	Dnm1l	exon	ENSMUSG00000022789	ProperStrand	29	chr4	131865930	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.9946
chr19	38470512	38470530	protein_coding	Tmem20	utr5	ENSMUSG00000044026	NonProperStrand	23	chr3	123210890	123210966	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.7662
chr12	17552949	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr17	35089181	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	6	-0.9501
chr7	26687567	26687585	protein_coding	Cyp2b10	intron	ENSMUSG00000030483	ProperStrand	2	chr3	123210907	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-9.1566
chr7	133700723	133700896	protein_coding	Eif3c	exon	ENSMUSG00000030738	ProperStrand	92	chr11	6296716	6296736	protein_coding	Zmiz2	exon	ENSMUSG00000041164	ProperStrand	69	1	-12.1738
chr16	13668716	13668734	SINE	B4A	B4	chr16B4A13668636	ProperStrand	1	chr11	62418046	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-inf
chr16	56035872	56035960	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	chr15	98350146	98350253	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	2	-2.0768
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr7	107422649	107422666	protein_coding	Pgm2l1	utr3	ENSMUSG00000030729	ProperStrand	2	1	-13.3349
chr19	6370857	6370888	protein_coding-noncoding	Sf1	utr5	ENSMUSG00000024949	ProperStrand	4	chr4	131908805	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-inf
chr13	9833552	9833670	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr7	19842860	19842876	protein_coding	Vasp	utr3	ENSMUSG00000030403	ProperStrand	28	2	-10.4745
chr2	38280204	38280222	lincRNA	Gm13589	intron	ENSMUSG00000085950	NonProperStrand	31	chr11	69483190	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.6332
chr7	117282782	117282799	protein_coding	Wee1	exon	ENSMUSG00000031016	ProperStrand	5	chr7	116663637	116663711	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-12.2465
mmu-miR-6238	1	18	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr10	90581084	90581195	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	3	-6.1006
chr18	10052129	10052153	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr7	73254950	73255080	protein_coding	Chsy1	exon	ENSMUSG00000032640	ProperStrand	25	3	-19.2239
chr1	59539683	59539700	protein_coding	Fzd7	utr5	ENSMUSG00000041075	ProperStrand	373	chr14	33005095	33005139	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-0.9984
chrX	34589398	34589415	protein_coding	Sowahd	exon	ENSMUSG00000044400	ProperStrand	26	chr11	68886963	68887038	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-5.7674
chr4	135521534	135521550	protein_coding	Gale	exon	ENSMUSG00000028671	ProperStrand	61	chr18	73693121	73693150	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-5.4917
chr5	136707645	136707662	protein_coding	Sh2b2	exon	ENSMUSG00000005057	NonProperStrand	101	chr7	116664817	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.7002
chr11	97639634	97642650	protein_coding	Rpl23	exon	ENSMUSG00000071415	ProperStrand	920	chr10	110918597	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	5	-1.3608
chr9	66286988	66287004	protein_coding	Herc1	exon	ENSMUSG00000038664	ProperStrand	81	chr16	23110902	23110992	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	NonProperStrand	93	2	-18.3202
chr19	56765655	56765745	LINE	L1MB3	L1	chr19L1MB356765478	NonProperStrand	1	chr19	56765938	56766028	LTR	MTD	MaLR	chr19MTD56765779	ProperStrand	1	1	-inf
chr17	66298043	66298102	protein_coding	Twsg1	exon	ENSMUSG00000024098	ProperStrand	22	chr7	138277354	138277371	protein_coding	Fgfr2	intron	ENSMUSG00000030849	NonProperStrand	95	1	-14.4272
chr7	31750519	31750609	protein_coding	Lsr	intron	ENSMUSG00000001247	ProperStrand	8	chr10	12570376	12570466	protein_coding	Utrn	intron	ENSMUSG00000019820	NonProperStrand	12	1	-19.5927
chr16	57391589	57391675	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr3	108357257	108357357	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	NonProperStrand	17	1	-12.8667
chr9	6987461	6987481	protein_coding	Dync2h1	intron	ENSMUSG00000047193	NonProperStrand	5	chr16	23111446	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-5.8178
chr4	32810656	32822605	protein_coding	Mdn1	exon	ENSMUSG00000058006	ProperStrand	184	chrX	34622906	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	6	-9.5217
chrX	7640927	7641037	protein_coding	Suv39h1	exon	ENSMUSG00000039231	ProperStrand	24	chr12	17553031	17553087	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-6.9013
chr7	116664830	116664868	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	chr4	132394333	132394433	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	6	-2.4963
chr4	148755350	148755439	protein_coding	Ube4b	exon	ENSMUSG00000028960	ProperStrand	66	chr11	97642952	97643008	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.3105
chr12	110881064	110888913	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr1	89673606	89673764	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	5	-2.3229
chr8	125416777	125416867	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	chr10	39978402	39978482	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-2.0847
chr5	108529852	108529895	protein_coding	Mtf2	exon	ENSMUSG00000029267	ProperStrand	39	chr4	147988651	147988668	protein_coding	Tardbp	utr3	ENSMUSG00000041459	ProperStrand	120	1	-12.7907
chr11	69435820	69435996	protein_coding	Sat2	exon	ENSMUSG00000069835	ProperStrand	1	chr4	131865860	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr6	89269326	89269389	protein_coding	Plxna1	utr3	ENSMUSG00000030084	ProperStrand	233	chrX	70279609	70280537	protein_coding	Pnma5	utr3	ENSMUSG00000050424	ProperStrand	12	1	-13.8796
chr11	77996576	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	chr1	172975116	172975189	tRNA	tRNA699-GlyGCC	.	588034	ProperStrand	660	1	-1.7267
chr19	5800699	5800730	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr3	88715214	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-1.8673
chr11	62172474	62173295	protein_coding	Ncor1	exon	ENSMUSG00000018501	ProperStrand	132	chr13	23714093	23714138	protein_coding	Hist1h1e	exon	ENSMUSG00000051627	ProperStrand	41	2	-18.8801
chr5	32764366	32764467	protein_coding	Ppp1cb	intron	ENSMUSG00000014956	ProperStrand	25	chrX	34622906	34622957	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	10	-19.5566
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	3	-6.9719
chr15	100266798	100266815	SINE	ID2	ID	chr15ID2100266775	ProperStrand	1	chr16	23111703	23111726	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-inf
chr19	4786135	4786158	protein_coding	Rbm14	intron	ENSMUSG00000006456	ProperStrand	84	chr11	69483136	69483179	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.8963
chr17	40931065	40931081	protein_coding	Crisp2	utr5	ENSMUSG00000023930	ProperStrand	1	chr8	92871887	92871905	protein_coding	Tox3	utr5	ENSMUSG00000043668	ProperStrand	7	1	-inf
chr10	70840028	70840118	protein_coding	Ipmk	utr3	ENSMUSG00000060733	ProperStrand	22	chr15	34370572	34370652	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	4	-17.0444
chr19	44627232	44627309	protein_coding	Ndufb8	exon	ENSMUSG00000025204	ProperStrand	8	chr19	8963086	8963116	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	4	-19.1292
chr10	125450523	125450574	protein_coding	Lrig3	exon	ENSMUSG00000020105	ProperStrand	40	chr4	131908232	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	6	-12.8063
chr9	102521264	102522027	protein_coding	Cep63	exon	ENSMUSG00000032534	ProperStrand	23	chr11	69483252	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.1990
chr5	116009546	116013365	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	chr16	23110827	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	13	-1.1685
chr19	12006664	12006716	protein_coding	Patl1	exon	ENSMUSG00000046139	ProperStrand	49	chr16	23111374	23111464	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.5489
chr15	88655150	88655603	protein_coding	Creld2	exon	ENSMUSG00000023272	ProperStrand	8	chr4	131908357	131908429	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-12.4254
chr1	54361816	54371000	protein_coding	Ccdc150	exon	ENSMUSG00000025983	ProperStrand	56	chr4	131908301	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-2.8514
chr7	128789546	128789566	protein_coding	Usp31	utr3	ENSMUSG00000063317	ProperStrand	35	chr1	162965527	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-7.1759
chr4	41238445	41238512	protein_coding	Dcaf12	utr3	ENSMUSG00000028436	ProperStrand	33	chr2	26493361	26493447	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-4.8821
chr14	21561085	21561175	protein_coding	Camk2g	intron	ENSMUSG00000021820	ProperStrand	24	chr4	131908363	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.9196
chr10	79717715	79717864	protein_coding	Ndufs7	exon	ENSMUSG00000020153	ProperStrand	15	chr1	162968443	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-8.8691
chr15	102492855	102492955	LINE	L2	L2	chr15L2102492759	ProperStrand	2	chr9	78023109	78023165	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	2	-inf
chr3	88667478	88672715	protein_coding	Gon4l	exon	ENSMUSG00000054199	ProperStrand	1260	chr19	8799030	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-0.7022
chr9	19462111	19462328	LINE	L1Md_A	L1	chr9L1Md_A19461964	ProperStrand	81	chr14	34780819	34781006	protein_coding	Zfp488	utr3	ENSMUSG00000044519	NonProperStrand	39	2	-18.9858
chr11	58682475	58682491	protein_coding	2810021J22Rik	utr5	ENSMUSG00000020491	ProperStrand	162	chr18	35716762	35716815	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-0.7686
chr17	13184997	13185015	protein_coding	Wtap	utr5	ENSMUSG00000060475	ProperStrand	119	chr12	17552949	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-3.7864
chr7	132842932	132843022	protein_coding	Gtf3c1	exon	ENSMUSG00000032777	ProperStrand	161	chr4	131866157	131866237	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-1.9472
chr10	59681973	59681992	protein_coding	Chst3	utr5	ENSMUSG00000057337	ProperStrand	10	chr7	117189932	117190057	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-6.8419
chr5	136707645	136707662	protein_coding	Sh2b2	exon	ENSMUSG00000005057	NonProperStrand	101	chr18	33954844	33954934	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	3	-6.7490
chr9	4299367	4302483	protein_coding	Aasdhppt	exon	ENSMUSG00000025894	ProperStrand	121	chr8	123197895	123197986	protein_coding	Cox4i1	exon	ENSMUSG00000031818	ProperStrand	31	1	-13.2369
chr4	106472505	106472522	protein_coding	Acot11	intron	ENSMUSG00000034853	ProperStrand	61	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-10.7298
chr11	69730832	69731099	protein_coding	Eif5a	utr3	ENSMUSG00000078812	ProperStrand	164	chr3	85944541	85944565	snoRNA	ENSMUSG00000064390_Rnu73b	.	ENSMUSG00000064390	ProperStrand	164	3	-inf
chr6	83145069	83145085	protein_coding	Dctn1	exon	ENSMUSG00000031865	ProperStrand	17	chr16	23111396	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.3471
chr11	72257392	72257566	protein_coding	Mybbp1a	exon	ENSMUSG00000040463	ProperStrand	279	chr5	74489585	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-1.2250
chr1	162966890	162966910	non_coding	Gas5	.	ENSMUSG00000053332	ProperStrand	144	chr11	104197639	104197870	protein_coding	1700081L11Rik	exon	ENSMUSG00000018412	ProperStrand	73	1	-11.1615
chr9	62641624	62641700	protein_coding	Fem1b	utr3	ENSMUSG00000032244	ProperStrand	111	chr7	117166731	117166821	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-3.6526
chr6	89267529	89267550	protein_coding	Plxna1	utr3	ENSMUSG00000030084	ProperStrand	233	chr19	42225881	42225897	protein_coding	Marveld1	utr3	ENSMUSG00000044345	NonProperStrand	112	1	-9.3410
chr2	119475041	119475093	protein_coding	Nusap1	utr3	ENSMUSG00000027306	ProperStrand	11	chr4	131908688	131908722	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-7.0530
chr12	87860410	87860470	protein_coding	Esrrb	utr3	ENSMUSG00000021255	ProperStrand	254	chr6	131337993	131338009	protein_coding	Csda	intron	ENSMUSG00000030189	ProperStrand	86	1	-9.6975
chr4	116631273	116631291	protein_coding	Zswim5	intron	ENSMUSG00000033948	NonProperStrand	8	chr16	23111775	23111816	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.6662
chr7	140074723	140074756	protein_coding	Fam175b	exon	ENSMUSG00000030965	ProperStrand	4	chr10	23505151	23505202	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-10.6986
chr19	9043855	9051873	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	chr7	148634702	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	3	-2.8894
chr13	38288920	38288959	protein_coding	Dsp	exon	ENSMUSG00000054889	ProperStrand	23	chr4	131908689	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.7500
chr1	36231010	36231795	protein_coding	Uggt1	exon	ENSMUSG00000037470	ProperStrand	67	chr14	31827479	31827534	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-6.7257
chr5	130045558	130045645	protein_coding	Sfswap	exon	ENSMUSG00000029439	ProperStrand	34	chr7	133612717	133612733	protein_coding	Sh2b1	exon	ENSMUSG00000030733	NonProperStrand	4	1	-18.8030
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	137273863	137273881	SINE	B4A	B4	chr7B4A137273825	ProperStrand	1	1	-inf
chr7	26140371	26140388	protein_coding	Megf8	exon	ENSMUSG00000045039	ProperStrand	100	chr9	108463395	108463941	protein_coding	Impdh2	exon	ENSMUSG00000062867	ProperStrand	74	1	-11.8658
chr7	148141759	148141802	protein_coding	Ifitm2	exon	ENSMUSG00000060591	ProperStrand	25	chr11	69483190	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-6.8218
chr17	45706697	45707228	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr13	49779747	49779802	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	2	-2.1598
chr3	104459489	104459553	protein_coding	Slc16a1	exon	ENSMUSG00000032902	ProperStrand	48	chr11	69481385	69481475	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.6095
chr10	40190946	40190968	protein_coding	Cdk19	intron	ENSMUSG00000038481	NonProperStrand	3	chr7	52714504	52714580	protein_coding	Ftl1	exon	ENSMUSG00000050708	ProperStrand	807	1	-14.4786
chr11	76072854	76072896	protein_coding	Nxn	intron	ENSMUSG00000020844	ProperStrand	20	chr17	24857768	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.2966
chr10	12848469	12848554	protein_coding	Plagl1	exon	ENSMUSG00000019817	ProperStrand	5	chr1	162965533	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-13.5418
chr4	120119685	120119705	protein_coding	Scmh1	utr5	ENSMUSG00000000085	ProperStrand	4	chr10	90581034	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	3	-inf
chr5	67074977	67078104	protein_coding	Uchl1	exon	ENSMUSG00000029223	ProperStrand	29	chr10	23506278	23506344	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-8.4044
chr8	73908432	73908449	protein_coding	Ushbp1	utr3	ENSMUSG00000034911	ProperStrand	6	chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-12.4916
chr2	26493462	26494872	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr5	74489201	74489327	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	9	-6.4867
chrX	71589885	71589904	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr11	62418029	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-2.6148
chr5	73155399	73155417	protein_coding	Tec	exon	ENSMUSG00000029217	NonProperStrand	23	chr16	23110827	23110851	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.4133
chr4	131865855	131865969	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr11	106874234	106874253	tRNA	tRNA945-ArgCCG	.	433762	ProperStrand	133	2	-1.4745
chr7	4452554	4452644	protein_coding	Ppp1r12c	intron	ENSMUSG00000019254	ProperStrand	15	chr12	106269399	106269479	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	2	-11.1536
chr1	71341491	71341508	protein_coding	Abca12	exon	ENSMUSG00000050296	NonProperStrand	143	chr4	131908232	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-0.9451
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr6	131338214	131338352	protein_coding	Csda	utr5	ENSMUSG00000030189	ProperStrand	86	1	-5.6612
chr13	51743569	51743649	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	chr7	134671421	134671511	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-1.8293
chr16	23111389	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	chr3	85944542	85944610	snoRNA	ENSMUSG00000064390_Rnu73b	.	ENSMUSG00000064390	ProperStrand	164	4	-1.8130
chr5	54389949	54389965	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	chr14	55476645	55476661	protein_coding	Homez	exon	ENSMUSG00000057156	NonProperStrand	127	1	-9.2781
chr5	108336377	108336490	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	chr17	23687226	23687256	tRNA	tRNA994-ArgCCG	.	502835	ProperStrand	60	2	-8.0667
chr5	126631668	126631758	SINE	B3A	B2	chr5B3A126631552	ProperStrand	1	chr5	126631939	126632019	SINE	B4	B4	chr5B4126631778	ProperStrand	1	1	-inf
chr5	135684535	135684565	protein_coding-noncoding	Baz1b	utr5	ENSMUSG00000002748	ProperStrand	2	chr16	23110922	23110957	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-inf
chr6	119303344	119303434	protein_coding	Adipor2	utr3	ENSMUSG00000030168	ProperStrand	79	chr9	120039540	120039620	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.8257
chr4	131908689	131908753	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	chr2	158203955	158204026	snoRNA	ENSMUSG00000065840_SNORA71	.	ENSMUSG00000065840	ProperStrand	107	4	-3.1069
chr4	151706464	151706485	protein_coding	Rpl22	exon	ENSMUSG00000028936	ProperStrand	112	chr1	88247743	88247774	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-3.9067
chr2	147011594	147011610	protein_coding	Nkx2-2	exon	ENSMUSG00000027434	ProperStrand	47	chr13	76341035	76341055	protein_coding	Fam81b	intron	ENSMUSG00000078966	NonProperStrand	220	1	-11.2002
chr2	69387030	69388893	protein_coding	Lrp2	exon	ENSMUSG00000027070	ProperStrand	35	chr9	78327454	78327544	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	3	-16.6975
chr5	23924513	23924529	protein_coding	Cdk5	utr3	ENSMUSG00000028969	NonProperStrand	11	chr4	142987376	142987409	protein_coding	Pramel1	exon	ENSMUSG00000041805	ProperStrand	2	2	-inf
chr6	53831149	53831169	protein_coding	Cpvl	intron	ENSMUSG00000052955	ProperStrand	5	chr15	79908984	79909012	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-10.5905
chr11	115704634	115704681	protein_coding	Llgl2	exon	ENSMUSG00000020782	ProperStrand	62	chr17	24343586	24343602	protein_coding	Ntn3	exon	ENSMUSG00000079662	ProperStrand	237	1	-10.4929
chr16	23110881	23110971	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	chr11	68853922	68853960	tRNA	tRNA396-ProCGG	.	829437	ProperStrand	48	2	-1.1542
chr15	10392019	10392050	protein_coding	Dnajc21	exon	ENSMUSG00000044224	ProperStrand	17	chr4	131865916	131865981	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-13.3462
chr4	116827107	116827133	protein_coding-noncoding	Rps8	utr3	ENSMUSG00000047675	ProperStrand	14	chr4	131865908	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-10.7509
chr8	55606642	55606704	antisense	Spcs3	.	ENSMUSG00000054408	ProperStrand	30	chr13	113342177	113342193	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	3	-inf
chr5	74489201	74489267	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr9	119288721	119288738	protein_coding	Xylb	intron	ENSMUSG00000035769	NonProperStrand	11	1	-9.0454
chrX	130609217	130609303	protein_coding	Cstf2	exon	ENSMUSG00000031256	ProperStrand	26	chr16	23111780	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-5.7618
chr11	88846387	88849297	protein_coding	Coil	exon	ENSMUSG00000033983	NonProperStrand	3	chr18	35714144	35714222	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-9.6483
chr1	133141328	133141345	protein_coding	Rassf5	exon	ENSMUSG00000026430	ProperStrand	73	chr7	148634703	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	3	-8.9547
chr1	155097800	155098223	protein_coding	Lamc1	exon	ENSMUSG00000026478	ProperStrand	239	chr18	14806271	14806371	snRNA	ENSMUSG00000065369_U1	.	ENSMUSG00000065369	ProperStrand	5	1	-15.7036
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-2.8568
chr7	141945637	141945728	protein_coding	Dock1	intron	ENSMUSG00000058325	NonProperStrand	18	chr7	141986927	141987007	protein_coding	Dock1	intron	ENSMUSG00000058325	ProperStrand	22	1	-17.6466
mmu-miR-292a-3p	1	24	miRNA	mmu-miR-292a-3p	.	mmu-miR-292a-3p	ProperStrand	38	chr7	116664870	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.3626
chrX	159212504	159212524	protein_coding	Rbbp7	exon	ENSMUSG00000031353	ProperStrand	48	chr4	131865938	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.1244
chr3	132134213	132134313	LTR	RMER20B	ERVK	chr3RMER20B132134115	NonProperStrand	1	chr2	130101242	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-inf
chr15	100358955	100358972	protein_coding	Tfcp2	exon	ENSMUSG00000009733	NonProperStrand	77	chr2	26494780	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-4.6656
chr16	37877213	37878412	protein_coding	Lrrc58	utr3	ENSMUSG00000034158	ProperStrand	23	chr2	26494762	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.9167
chr2	162906473	162908289	protein_coding	Mybl2	exon	ENSMUSG00000017861	ProperStrand	230	chr18	35102297	35102337	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	2	-6.6944
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr7	29073210	29073330	protein_coding	BC089491	exon	ENSMUSG00000046750	ProperStrand	62	1	-8.5273
chr5	112851739	112851761	protein_coding	Sez6l	intron	ENSMUSG00000058153	ProperStrand	81	chr11	97642952	97643025	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-3.5773
chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	2	-6.5151
chr2	91314535	91314620	protein_coding	Lrp4	exon	ENSMUSG00000027253	ProperStrand	16	chr5	121655128	121655157	protein_coding	Rpl6	intron	ENSMUSG00000029614	ProperStrand	332	1	-12.5722
chr1	159816638	159816655	LTR	MLT1H2	MaLR	chr1MLT1H2159816576	ProperStrand	14	chr8	108233712	108233729	protein_coding	4933405L10Rik	exon	ENSMUSG00000013158	ProperStrand	94	1	-15.3699
chr7	28146782	28146798	protein_coding	Spnb4	exon	ENSMUSG00000011751	NonProperStrand	84	chr7	108971290	108971306	protein_coding	Inppl1	utr3	ENSMUSG00000032737	ProperStrand	272	1	-9.6081
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr5	108336423	108336490	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-2.6974
chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	chr5	151755616	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	2	-6.6066
chr8	73115775	73115791	protein_coding	Ell	utr3	ENSMUSG00000070002	NonProperStrand	134	chr12	110923175	110923231	snoRNA	ENSMUSG00000084487_SNORD113	.	ENSMUSG00000084487	ProperStrand	183	1	-9.4646
chr6	122266191	122266418	protein_coding	M6pr	exon	ENSMUSG00000007458	ProperStrand	56	chr2	26493366	26493391	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	4	-12.6871
chr16	20507126	20507175	protein_coding	Eif2b5	exon	ENSMUSG00000003235	ProperStrand	38	chr6	91162839	91162857	protein_coding	Fbln2	utr5	ENSMUSG00000064080	ProperStrand	12	2	-inf
chr2	84577232	84577284	protein_coding-noncoding	Ypel4	utr5	ENSMUSG00000034059	NonProperStrand	1	chr2	84576602	84576672	protein_coding	Ypel4	intron	ENSMUSG00000034059	NonProperStrand	1	1	-inf
chr7	17019476	17019556	protein_coding	Zc3h4	exon	ENSMUSG00000059273	ProperStrand	95	chr10	110918547	110918631	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-2.6284
chr9	109778875	109778891	protein_coding	Cdc25a	intron	ENSMUSG00000032477	ProperStrand	27	chr2	130101241	130101289	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-8.1894
chr5	130338530	130338635	protein_coding	Sumf2	utr3	ENSMUSG00000025538	ProperStrand	20	chr16	23110841	23110873	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-3.0614
chr2	90235314	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr14	72301755	72301771	SINE	B4	B4	chr14B472301692	NonProperStrand	99	1	-3.5232
chr9	15124257	15124283	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	NonProperStrand	100	chr7	52382237	52382303	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	5	-20.2727
chr6	120467088	120468467	protein_coding	Cecr5	exon	ENSMUSG00000058979	ProperStrand	97	chr7	29136552	29136610	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.5977
chr6	128380838	128380876	protein_coding	Fkbp4	exon	ENSMUSG00000030357	ProperStrand	114	chr17	24857723	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	7	-11.5544
chr2	164796662	164796679	protein_coding	Slc12a5	intron	ENSMUSG00000017740	NonProperStrand	40	chr11	97643045	97643077	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.1871
chr15	36527799	36527968	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr4	132530098	132530117	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	1	-4.2605
chr10	59756210	59757370	protein_coding	Psap	exon	ENSMUSG00000004207	ProperStrand	124	chr2	146125209	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	1	-9.6088
chr9	56338237	56338302	protein_coding	Hmg20a	intron	ENSMUSG00000032329	ProperStrand	87	chr1	162967530	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-2.8060
chr2	26493361	26493388	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr2	26767016	26767563	protein_coding	Rpl7a	exon	ENSMUSG00000062647	ProperStrand	234	1	-3.5856
chr9	20718458	20718475	protein_coding	Dnmt1	exon	ENSMUSG00000004099	ProperStrand	91	chr11	106362638	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-6.5779
chr15	81213448	81218821	protein_coding	St13	exon	ENSMUSG00000022403	ProperStrand	59	chr11	6520326	6520406	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	1	-7.7509
chr8	108107387	108107467	LTR	MTEa	MaLR	chr8MTEa108107368	NonProperStrand	1	chr8	108107090	108107180	SINE	B1_Mus1	Alu	chr8B1_Mus1108107009	ProperStrand	1	1	-inf
chr8	82341534	82341624	LTR	ORR1B1-int	MaLR	chr8ORR1B1-int82341453	ProperStrand	1	chr8	82341307	82341387	LTR	ORR1B1	MaLR	chr8ORR1B182341084	ProperStrand	1	1	-inf
chr3	98124576	98124656	protein_coding	Phgdh	exon	ENSMUSG00000053398	ProperStrand	46	chr2	158182156	158182220	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-5.5203
chr6	113061489	113064886	protein_coding	Setd5	exon	ENSMUSG00000034269	ProperStrand	162	chr9	15119631	15119711	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.0976
chr10	60794477	60794495	protein_coding	X99384	intron	ENSMUSG00000020092	NonProperStrand	6	chr4	116826700	116826766	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	2	-18.0472
chr12	17552930	17557620	protein_coding	Odc1	intron	ENSMUSG00000011179	ProperStrand	173	chr16	23111445	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	9	-6.8516
chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	chr17	35299573	35299647	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-0.9586
chr2	158182156	158182180	lincRNA	9430008C03Rik	intron	ENSMUSG00000085385	ProperStrand	1039	chr7	150717355	150717418	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	2	-1.5043
chr18	35871472	35871514	protein_coding	1700066B19Rik	intron	ENSMUSG00000073598	NonProperStrand	14	chr5	108336393	108336493	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-7.7830
chr9	35020404	35020442	protein_coding	Srpr	exon	ENSMUSG00000032042	ProperStrand	54	chr17	24856620	24856720	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	3	-15.1118
chr7	121193819	121193882	protein_coding	Rras2	exon	ENSMUSG00000055723	ProperStrand	26	chr11	74718963	74719010	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	3	-inf
chr4	128975341	128975431	protein_coding	Sync	intron	ENSMUSG00000001333	ProperStrand	4	chr6	144193926	144194016	protein_coding	Sox5	intron	ENSMUSG00000041540	ProperStrand	34	1	-18.8058
chr3	95700669	95700781	protein_coding	Aph1a	utr3	ENSMUSG00000015750	ProperStrand	11	chr8	82256182	82256208	protein_coding	Anapc10	intron	ENSMUSG00000036977	ProperStrand	11	1	-19.3304
chr11	117866406	117866469	protein_coding	Pgs1	intron	ENSMUSG00000017715	ProperStrand	25	chr8	14847356	14847372	protein_coding	Dlgap2	utr3	ENSMUSG00000047495	ProperStrand	20	1	-17.2448
chr6	125118199	125118261	protein_coding	Ncapd2	utr3	ENSMUSG00000038252	ProperStrand	170	chr16	35932620	35932636	protein_coding	Dtx3l	exon	ENSMUSG00000049502	ProperStrand	152	1	-9.3598
chr6	137699284	137699374	protein_coding	Strap	utr3	ENSMUSG00000030224	ProperStrand	27	chr11	62416575	62416655	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-6.7436
chr5	123622050	123622066	protein_coding	Hpd	exon	ENSMUSG00000029445	ProperStrand	254	chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-3.6780
chr2	90235293	90235340	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	151701593	151701632	protein_coding	Rpl22	exon	ENSMUSG00000028936	ProperStrand	112	1	-3.2980
chr4	58839330	58839914	protein_coding	AI314180	exon	ENSMUSG00000050812	ProperStrand	19	chr4	131908234	131908297	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.3472
chr16	87485917	87486085	protein_coding	Cct8	exon	ENSMUSG00000025613	ProperStrand	65	chr5	74489585	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-3.6293
chr4	147988651	147988668	protein_coding	Tardbp	utr3	ENSMUSG00000041459	ProperStrand	120	chr2	166890780	166890829	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	1	-8.9920
chr15	78982035	78982051	protein_coding	Polr2f	exon	ENSMUSG00000033020	NonProperStrand	71	chr18	35381732	35381788	protein_coding	Ctnna1	exon	ENSMUSG00000037815	ProperStrand	115	1	-11.6679
chr7	5031903	5032003	protein_coding	Epn1	utr5	ENSMUSG00000035203	ProperStrand	15	chr1	162967515	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-6.1639
chr1	183748972	183749022	protein_coding	Lbr	exon	ENSMUSG00000004880	ProperStrand	97	chr14	76247725	76247765	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-3.2807
chr11	35771718	35771818	protein_coding	Wwc1	intron	ENSMUSG00000018849	ProperStrand	52	chr17	39985225	39985243	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-6.2143
chr7	51097698	51097719	protein_coding	Klk5	exon	ENSMUSG00000074155	ProperStrand	29	chr11	69483135	69483261	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	12	-inf
chr2	163691197	163691287	protein_coding	Rims4	exon	ENSMUSG00000035226	ProperStrand	7	chr18	35714154	35714234	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-12.5749
chr2	31472345	31472445	protein_coding	Fubp3	utr3	ENSMUSG00000026843	ProperStrand	35	chr9	96372184	96372233	protein_coding	Rnf7	exon	ENSMUSG00000051234	ProperStrand	5	1	-18.8685
chr11	65092048	65092066	lincRNA	Gm12295	exon	ENSMUSG00000085162	NonProperStrand	3	chr5	130300436	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-8.5956
chrX	10295803	10295861	protein_coding	Mid1ip1	exon	ENSMUSG00000008035	ProperStrand	27	chr6	13580651	13591723	protein_coding	B630005N14Rik	exon	ENSMUSG00000042742	ProperStrand	7	5	-inf
chr2	71721987	71724076	protein_coding	Pdk1	exon	ENSMUSG00000006494	ProperStrand	37	chr2	130102057	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-6.3083
chr12	88791594	88791783	protein_coding	Snw1	exon	ENSMUSG00000021039	ProperStrand	36	chr16	23109051	23109090	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-8.3047
chr9	107158625	107158642	protein_coding	Mapkapk3	exon	ENSMUSG00000032577	ProperStrand	16	chr16	90498175	90498239	protein_coding	Hunk	utr3	ENSMUSG00000053414	ProperStrand	104	1	-14.9113
chr13	56229717	56229817	protein_coding	H2afy	utr5	ENSMUSG00000015937	ProperStrand	103	chr18	73693167	73693186	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-4.4801
chr8	109536233	109536333	protein_coding	Sntb2	utr3	ENSMUSG00000041308	ProperStrand	41	chr4	131865930	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.3878
chr5	138704136	138704781	protein_coding	BC037034	exon	ENSMUSG00000036948	ProperStrand	7	chr5	130300460	130300550	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-15.8659
chr1	184899153	184899169	protein_coding	Tlr5	utr5	ENSMUSG00000079164	NonProperStrand	5	chr4	131865914	131865934	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-6.5022
chr13	70733783	70733808	protein_coding	BC018507	exon	ENSMUSG00000034525	ProperStrand	43	chr10	23505174	23505264	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-3.1809
chr18	63109676	63109692	protein_coding	Apcdd1	exon	ENSMUSG00000071847	NonProperStrand	254	chr2	26494811	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-0.8775
chr13	79659338	79659354	LTR	RodERV21-int	ERV1	chr13RodERV21-int79658190	ProperStrand	43	chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	1	-9.3854
chr17	12933256	12941548	protein_coding	Igf2r	exon	ENSMUSG00000023830	ProperStrand	151	chr1	88252836	88252899	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-4.8367
chr11	101306578	101306644	protein_coding	Rpl27	exon	ENSMUSG00000063316	ProperStrand	96	chr5	130300474	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.7427
chr3	45780645	45780665	LINE	Lx2B	L1	chr3Lx2B45780445	ProperStrand	34	chr11	6428108	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.2505
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	125626958	125627005	snoRNA	ENSMUSG00000064450_Snord68	.	ENSMUSG00000064450	ProperStrand	181	1	-2.4542
chr4	140121138	140121154	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	chr3	108357255	108357325	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-3.0221
chr4	33680370	33680390	Simple_repeat	(TA)n	Simple_repeat	chr4(TA)n33680374	NonProperStrand	2	chr19	8963028	8963128	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-9.4105
chr7	135587348	135587405	protein_coding	Tial1	exon	ENSMUSG00000030846	ProperStrand	25	chr3	123210911	123210983	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	5	-15.5458
chr14	24969837	24969891	protein_coding	Dlg5	exon	ENSMUSG00000021782	ProperStrand	46	chr7	117190025	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.8238
chr11	59577976	59578956	protein_coding	Mprip	exon	ENSMUSG00000005417	ProperStrand	58	chr8	125418803	125418819	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	1	-9.6841
chr11	59631519	59631593	protein_coding	Cops3	utr3	ENSMUSG00000019373	ProperStrand	19	chr4	131865855	131865945	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-6.4425
chr8	49952662	49952680	LINE	L1MC1	L1	chr8L1MC149952188	NonProperStrand	1	chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	1	-inf
chr19	23140045	23140062	lincRNA	C330002G04Rik	intron	ENSMUSG00000087169	ProperStrand	34	chr5	116010796	116010864	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	2	-17.6662
chr17	45704875	45704913	protein_coding	Hsp90ab1	utr3	ENSMUSG00000023944	ProperStrand	1627	chr7	88489430	88489446	protein_coding	Rps17	intron	ENSMUSG00000061787	ProperStrand	105	1	-5.6284
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr6	145564547	145564563	protein_coding	Tuba3b	utr5	ENSMUSG00000067338	ProperStrand	152	1	-5.9008
chr3	90284584	90284615	protein_coding	Ilf2	exon	ENSMUSG00000001016	ProperStrand	28	chr9	120039540	120039630	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-7.9095
chr4	154993607	154993697	protein_coding	Slc35e2	utr3	ENSMUSG00000042202	ProperStrand	6	chr11	23233487	23233572	protein_coding	Usp34	exon	ENSMUSG00000056342	ProperStrand	68	1	-17.4694
chr6	54379743	54379760	lincRNA	9130019P16Rik	exon	ENSMUSG00000073067	ProperStrand	255	chr7	4469909	4469954	protein_coding	Tnni3	utr3	ENSMUSG00000035458	ProperStrand	5	1	-15.5740
chr14	25673634	25673651	DNA	MER63D	AcHobo	chr14MER63D25673510	NonProperStrand	65	chr4	21606097	21606114	protein_coding	Prdm13	exon	ENSMUSG00000040478	ProperStrand	51	1	-13.4829
chr4	44610807	44610824	protein_coding	Pax5	intron	ENSMUSG00000014030	ProperStrand	4	chr11	97643024	97643077	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-7.8635
chr9	74905153	74905206	protein_coding	Arpp19	utr3	ENSMUSG00000007656	ProperStrand	3	chr16	23110936	23110957	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr8	9970804	9970820	protein_coding	Lig4	utr3	ENSMUSG00000049717	NonProperStrand	1	chr17	35299507	35299565	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-inf
chr19	47145532	47145622	protein_coding	Taf5	exon	ENSMUSG00000025049	ProperStrand	5	chr16	23111374	23111454	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-5.8178
chr14	32986669	32987657	protein_coding	Ncoa4	exon	ENSMUSG00000056234	ProperStrand	15	chr18	35716834	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.7126
chr13	76156115	76156132	protein_coding	Rfesd	utr5	ENSMUSG00000043190	ProperStrand	30	chr1	88247816	88247876	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-6.4619
chr14	34780583	34781406	protein_coding	Zfp488	utr3	ENSMUSG00000044519	ProperStrand	54	chr7	54441624	54442514	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	12	-18.9624
chr2	125593172	125593558	protein_coding	Secisbp2l	exon	ENSMUSG00000035093	ProperStrand	26	chr3	121381031	121381048	protein_coding	4930432M17Rik	intron	ENSMUSG00000074248	NonProperStrand	33	1	-16.1884
chr9	78215795	78215885	protein_coding	Dppa5a	exon	ENSMUSG00000060461	ProperStrand	79	chr4	131908369	131908449	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.0451
chr2	158182209	158182279	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	chr10	23505559	23505618	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	9	-9.3211
chr6	31474332	31474432	protein_coding	Podxl	exon	ENSMUSG00000025608	ProperStrand	37	chr14	31827517	31827534	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-7.9107
chr10	79857816	79857907	protein_coding	Mbd3	exon	ENSMUSG00000035478	ProperStrand	27	chr7	117166761	117166841	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	5	-inf
chr10	76729674	76729764	protein_coding	Pofut2	exon	ENSMUSG00000020260	ProperStrand	4	chr5	130300452	130300532	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-7.9077
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr16	30955997	30956021	protein_coding	AI480653	utr3	ENSMUSG00000047434	ProperStrand	29	1	-8.3814
chr11	72265646	72265701	protein_coding	Spns2	utr3	ENSMUSG00000040447	ProperStrand	20	chr6	115758029	115758119	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	13	-19.4888
chr5	110792451	110792485	protein_coding	Fbrsl1	exon	ENSMUSG00000043323	ProperStrand	131	chr13	76341035	76341055	protein_coding	Fam81b	intron	ENSMUSG00000078966	NonProperStrand	220	1	-9.1422
chr6	87949907	87950007	protein_coding	Rab7	utr3	ENSMUSG00000079477	ProperStrand	33	chr4	131908688	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.1302
chr4	4532736	4532754	LINE	L1_Mus3	L1	chr4L1_Mus34532082	ProperStrand	1	chr16	23110828	23110875	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr11	98878344	98878456	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	chr8	73419657	73419783	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	21	-5.8442
chr7	116663631	116663767	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	chr11	62418013	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	23	-0.7564
chr4	135412069	135412152	protein_coding	Srsf10	utr5	ENSMUSG00000028676	ProperStrand	31	chr2	166890520	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	3	-19.0114
chr16	10576741	10578032	protein_coding	Clec16a	exon	ENSMUSG00000068663	ProperStrand	24	chr19	8963027	8963117	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.9221
chr6	125235854	125235871	protein_coding	Tuba3a	intron	ENSMUSG00000067702	NonProperStrand	8	chr8	73419683	73419743	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-7.0879
chr9	45502876	45502894	protein_coding	Dscaml1	intron	ENSMUSG00000032087	NonProperStrand	10	chr16	17291289	17292976	protein_coding	Pi4ka	exon	ENSMUSG00000041720	ProperStrand	39	1	-17.5357
chr17	32359047	32359073	protein_coding	Brd4	exon	ENSMUSG00000024002	ProperStrand	121	chr7	30231502	30231592	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	1	-7.4469
chr18	10052130	10052153	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr13	59803286	59803302	protein_coding	Fam75d3	exon	ENSMUSG00000050876	ProperStrand	46	1	-9.3348
chr4	130302910	130336616	protein_coding	Pum1	intron	ENSMUSG00000028580	ProperStrand	131	chr10	23505148	23505209	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-2.4414
chr6	146552247	146552264	protein_coding	Tm7sf3	utr3	ENSMUSG00000040234	ProperStrand	43	chr5	130300420	130300478	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.0960
chr4	132850073	132850101	protein_coding	Wdtc1	utr3	ENSMUSG00000037622	ProperStrand	81	chr16	23111690	23111753	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.4475
chr1	75447246	75447262	protein_coding	Accn4	utr5	ENSMUSG00000033007	NonProperStrand	23	chr11	62416575	62416642	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-7.0660
chr11	57927514	57927534	protein_coding	Cnot8	exon	ENSMUSG00000020515	ProperStrand	12	chr17	24857726	24857749	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-5.3067
chr7	27947487	27947568	protein_coding	Egln2	intron	ENSMUSG00000058709	ProperStrand	15	chr2	26768378	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-8.3820
chr11	116714068	116714084	protein_coding	Srsf2	exon	ENSMUSG00000034120	ProperStrand	132	chr2	130103454	130103503	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-6.4975
chr7	52714936	52715026	protein_coding	Ftl1	utr5	ENSMUSG00000050708	ProperStrand	807	chr13	49779721	49779801	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-2.1502
chr14	75730885	75730912	protein_coding	Zc3h13	exon	ENSMUSG00000022000	ProperStrand	42	chr18	74358698	74358724	protein_coding	Ska1	intron	ENSMUSG00000036223	ProperStrand	7	1	-18.3863
chr4	151677233	151677260	protein_coding	Icmt	exon	ENSMUSG00000039662	ProperStrand	48	chr7	16524110	16524219	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	1	-10.1673
chr4	128867196	128867212	protein_coding	Yars	exon	ENSMUSG00000028811	ProperStrand	131	chr11	62416951	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-4.5278
chr9	120039251	120039341	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	chr7	52714593	52714976	protein_coding	Ftl1	exon	ENSMUSG00000050708	ProperStrand	807	1	-4.4106
chr1	137779170	137780488	protein_coding	Pkp1	exon	ENSMUSG00000026413	ProperStrand	12	chr2	166890553	166890581	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-10.8289
chr4	43505656	43505732	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr11	49698807	49698907	protein_coding	Mapk9	utr3	ENSMUSG00000020366	ProperStrand	20	1	-5.1523
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chrX	165695583	165695599	protein_coding	Arhgap6	exon	ENSMUSG00000031355	ProperStrand	74	2	-6.8205
chr19	5796149	5796239	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr6	71832549	71832629	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-0.7485
chr7	28421172	28421284	protein_coding	Akt2	exon	ENSMUSG00000004056	ProperStrand	100	chr12	112779206	112779230	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-3.8075
chr3	113827103	113827119	protein_coding	Col11a1	utr3	ENSMUSG00000027966	NonProperStrand	139	chr15	102111489	102111553	protein_coding	Mfsd5	exon	ENSMUSG00000045665	ProperStrand	26	1	-13.3180
chr7	147123291	147123379	protein_coding	Kndc1	intron	ENSMUSG00000066129	NonProperStrand	17	chr1	162965554	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.6984
chr5	30446461	30469295	protein_coding	Hadha	exon	ENSMUSG00000025745	ProperStrand	35	chr16	23111436	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-3.7592
chr8	106976637	106976653	protein_coding	Ccdc79	exon	ENSMUSG00000052616	NonProperStrand	57	chr9	120038467	120038551	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.1312
chr2	34630695	34631073	protein_coding	Hspa5	exon	ENSMUSG00000026864	ProperStrand	181	chr2	30982094	30982111	protein_coding	Fnbp1	intron	ENSMUSG00000075415	ProperStrand	53	1	-11.3481
chr13	51804277	51805288	protein_coding	Sema4d	exon	ENSMUSG00000021451	ProperStrand	42	chr7	29136561	29136641	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-7.6710
chr17	35971958	35971988	protein_coding	Tubb5	exon	ENSMUSG00000001525	ProperStrand	624	chr5	75473198	75473215	protein_coding	Gsx2	utr3	ENSMUSG00000035946	ProperStrand	307	1	-5.4016
chr2	26493429	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr16	17642694	17642728	protein_coding	Smpd4	exon	ENSMUSG00000005899	ProperStrand	33	1	-7.3846
chrX	166417746	166417775	protein_coding	Mid1	intron	ENSMUSG00000035299	ProperStrand	209	chr7	116664794	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-0.7374
chr13	33266806	33266896	LTR	RMER17A	ERVK	chr13RMER17A33266749	NonProperStrand	1	chr13	33266663	33266753	SINE	B3	B2	chr13B333266603	NonProperStrand	1	1	-inf
chr17	32284744	32294889	protein_coding	Notch3	exon	ENSMUSG00000038146	ProperStrand	181	chr8	73419654	73419747	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	22	-inf
chr2	156681213	156681255	protein_coding	Tgif2	utr3	ENSMUSG00000062175	ProperStrand	9	chr16	23110959	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.9939
chr6	122664460	122664550	protein_coding	Nanog	utr3	ENSMUSG00000012396	ProperStrand	66	chr5	130300460	130300540	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.3476
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr15	34370544	34370625	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	3	-3.6088
chr10	16844327	16844346	LINE	L1_Mur1	L1	chr10L1_Mur116843303	ProperStrand	76	chr14	76372292	76372399	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	1	-8.5172
chr6	5807261	5807277	protein_coding	Dync1i1	intron	ENSMUSG00000029757	ProperStrand	10	chr15	85889272	85889291	protein_coding	Gramd4	utr5	ENSMUSG00000035900	ProperStrand	39	1	-17.5357
chr8	41672502	41675819	protein_coding	Mtmr7	exon	ENSMUSG00000039431	ProperStrand	40	chr11	69483167	69483247	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-5.4551
chr1	152296869	152296886	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	chrX	34622906	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	3	-1.0903
chr2	90235314	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr12	110881057	110881114	lincRNA	Rian	intron	ENSMUSG00000091793	ProperStrand	612	2	-1.4775
chr3	96654255	96654271	protein_coding	Pdzk1	exon	ENSMUSG00000038298	ProperStrand	101	chr16	23111775	23111808	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.1422
chr15	17759579	17759599	LTR	MTC	MaLR	chr15MTC17759301	ProperStrand	2	chr7	52974694	52974963	protein_coding	Rpl18	exon	ENSMUSG00000059070	ProperStrand	116	2	-inf
chr6	6528611	6528628	protein_coding	Shfm1	utr5	ENSMUSG00000042541	ProperStrand	8	chr5	108336363	108336409	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-8.9530
chr11	106364321	106407984	protein_coding	Tex2	exon	ENSMUSG00000040548	ProperStrand	24	chr16	23110837	23110930	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-7.9862
chr2	132078768	132078835	protein_coding	Pcna	utr5	ENSMUSG00000027342	ProperStrand	25	chr11	4820972	4820990	protein_coding	Thoc5	intron	ENSMUSG00000034274	ProperStrand	325	1	-11.6988
chr15	103072644	103072701	protein_coding	Hnrnpa1	exon	ENSMUSG00000046434	ProperStrand	68	chr7	118219574	118219642	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-3.9346
chr15	97966165	97966242	protein_coding	Asb8	utr3	ENSMUSG00000048175	ProperStrand	6	chr1	89673678	89673768	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-7.8515
chr2	119599585	119599675	protein_coding	Rpap1	exon	ENSMUSG00000034032	ProperStrand	96	chr16	23110874	23110936	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-1.0227
chr8	108233711	108233729	protein_coding	4933405L10Rik	exon	ENSMUSG00000013158	ProperStrand	94	chr9	106760292	106760385	protein_coding	Vprbp	exon	ENSMUSG00000040325	ProperStrand	35	3	-19.7383
chrX	135770555	135770593	protein_coding	Mum1l1	exon	ENSMUSG00000042515	ProperStrand	21	chr2	69705425	69705608	protein_coding	Ssb	exon	ENSMUSG00000068882	ProperStrand	37	9	-19.4959
chr1	102076759	102076795	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	chr7	148634747	148634837	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-0.8622
chr19	8798726	8798814	lincRNA	Snhg1	exon	ENSMUSG00000090867	ProperStrand	100	chr2	44426796	44430971	protein_coding	Gtdc1	exon	ENSMUSG00000036890	ProperStrand	22	1	-14.3254
chr6	71339016	71339035	protein_coding	Rmnd5a	utr3	ENSMUSG00000002222	ProperStrand	38	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.4538
chr14	124026091	124026107	protein_coding	Nalcn	utr5	ENSMUSG00000000197	NonProperStrand	12	chr5	75473198	75473215	protein_coding	Gsx2	utr3	ENSMUSG00000035946	ProperStrand	307	1	-13.3260
chr1	160887110	160887126	protein_coding	Pappa2	exon	ENSMUSG00000073530	ProperStrand	13	chr17	35089182	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-8.5579
chr17	46663594	46663610	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chrX	7306844	7306893	protein_coding	Praf2	exon	ENSMUSG00000031149	ProperStrand	9	1	-13.1174
chr10	127521503	127522222	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr9	53655867	53655910	protein_coding	Slc35f2	exon	ENSMUSG00000042195	ProperStrand	65	1	-8.5061
chr11	69480941	69481007	protein_coding	Eif4a1	utr3	ENSMUSG00000059796	ProperStrand	108	chr1	87983883	87983973	snoRNA	ENSMUSG00000077274_SNORA26	.	ENSMUSG00000077274	ProperStrand	361	7	-inf
chr13	96374713	96374729	protein_coding	F2r	exon	ENSMUSG00000048376	NonProperStrand	88	chr16	23110454	23110477	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.8342
chr7	133300308	133304391	protein_coding	Xpo6	exon	ENSMUSG00000000131	ProperStrand	36	chr18	36897504	36897824	protein_coding	Tmco6	exon	ENSMUSG00000006850	ProperStrand	10	2	-20.5663
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr10	17443080	17443097	protein_coding	Cited2	utr5	ENSMUSG00000039910	ProperStrand	64	1	-8.1867
chr7	140901079	140901198	protein_coding	Bccip	exon	ENSMUSG00000030983	ProperStrand	19	chr16	23110941	23110957	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7016
chr14	31378769	31378859	protein_coding	Tkt	exon	ENSMUSG00000021957	ProperStrand	160	chr11	69483137	69483217	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-0.9802
chr6	94776848	94776878	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	chr11	87240281	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	18	-inf
chr18	10052128	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr13	56804932	56824884	protein_coding	Smad5	utr5	ENSMUSG00000021540	ProperStrand	47	30	-inf
chr12	88488443	88496424	protein_coding	Pomt2	exon	ENSMUSG00000034126	NonProperStrand	331	chr15	79908929	79908984	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-2.3227
chr10	79879959	79880062	protein_coding	Tcf3	exon	ENSMUSG00000020167	NonProperStrand	24	chr17	46285129	46285145	protein_coding	Mad2l1bp	exon	ENSMUSG00000034509	NonProperStrand	67	1	-14.9411
chr14	51463983	51463999	protein_coding	Tep1	exon	ENSMUSG00000006281	NonProperStrand	73	chr3	101385156	101385184	protein_coding	Atp1a1	exon	ENSMUSG00000033161	ProperStrand	316	1	-9.5903
chr2	126892870	126892960	protein_coding	Ap4e1	utr3	ENSMUSG00000001998	ProperStrand	7	chr4	131866176	131866256	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-7.9553
chr1	39605602	39605682	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	chr13	90238633	90238723	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	1	-2.8877
chr2	121252413	121255229	protein_coding	Pdia3	exon	ENSMUSG00000027248	ProperStrand	74	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	1	-6.6116
chr9	51896207	51896248	protein_coding	Rdx	utr3	ENSMUSG00000032050	ProperStrand	60	chr4	122968661	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	2	-10.1835
chr3	87673882	87673962	protein_coding	Prcc	exon	ENSMUSG00000004895	ProperStrand	38	chr1	88253734	88253824	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	1	-8.2716
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr7	135119318	135119379	protein_coding-noncoding	Fus	utr5	ENSMUSG00000030795	ProperStrand	4	3	-20.3136
chr11	76953905	76953925	protein_coding	Efcab5	intron	ENSMUSG00000050944	NonProperStrand	4	chr8	73419678	73419778	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	NonProperStrand	53	1	-19.2405
chr4	148491958	148491976	protein_coding	Dffa	exon	ENSMUSG00000028974	NonProperStrand	23	chr7	116664817	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	6	-19.9074
chr5	143648356	143648373	protein_coding	Fbxl18	exon	ENSMUSG00000066640	ProperStrand	64	chr16	23110916	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-0.7095
chr17	46301196	46301213	protein_coding	Gtpbp2	exon	ENSMUSG00000023952	ProperStrand	21	chr7	52382011	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-8.8217
chr9	39358287	39358304	protein_coding	Olfr958	exon	ENSMUSG00000050853	NonProperStrand	266	chr7	35150663	35150705	protein_coding	Lsm14a	exon	ENSMUSG00000066568	ProperStrand	31	1	-11.6617
chr13	12286009	12287518	protein_coding	Mtr	exon	ENSMUSG00000021311	ProperStrand	22	chr4	131908688	131908718	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.8292
chr1	180267128	180267186	protein_coding	Hnrnpu	exon	ENSMUSG00000039630	ProperStrand	286	chr3	134924498	134924514	protein_coding	Cenpe	exon	ENSMUSG00000045328	ProperStrand	71	1	-9.8452
chr5	100855902	100855973	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr11	69719744	69719795	protein_coding	Neurl4	exon	ENSMUSG00000047284	ProperStrand	28	2	-13.0460
chr15	102844825	102844841	protein_coding	Hoxc5	exon	ENSMUSG00000022485	ProperStrand	40	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-10.1859
chr6	106802420	106802437	SINE	B3A	B2	chr6B3A106802372	NonProperStrand	4	chr13	49779746	49779801	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-12.6727
chr17	6943176	6943226	protein_coding	Ezr	utr3	ENSMUSG00000052397	ProperStrand	126	chrX	71517823	71517914	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	3	-11.9499
chrX	72779580	72779596	protein_coding	Vbp1	utr3	ENSMUSG00000031197	ProperStrand	6	chr1	162965539	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-7.8657
chr2	158323800	158323838	protein_coding	Ralgapb	utr3	ENSMUSG00000027652	ProperStrand	22	chr15	101182519	101182536	protein_coding	Krt80	intron	ENSMUSG00000037185	ProperStrand	7	1	-19.7570
chr19	53082307	53082324	protein_coding	Xpnpep1	intron	ENSMUSG00000025027	NonProperStrand	58	chrX	84483715	84483751	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-8.3169
chr17	24869755	24869771	protein_coding	Rpl3l	utr5	ENSMUSG00000002500	NonProperStrand	56	chr9	15119630	15119766	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.7499
chr9	63042015	63042031	protein_coding	Map2k5	exon	ENSMUSG00000058444	ProperStrand	193	chr12	106269290	106269351	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-2.0653
chr17	45704936	45708038	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr9	120037947	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	7	-3.1611
chr18	46763867	46763929	protein_coding	Eif1a	intron	ENSMUSG00000057561	ProperStrand	44	chr15	79913288	79913330	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	3	-10.1325
chr6	142211245	142214830	protein_coding	Slco1a5	exon	ENSMUSG00000063975	NonProperStrand	38	chr4	131908689	131908789	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.9012
chr12	104330679	104330695	protein_coding	Unc79	intron	ENSMUSG00000021198	NonProperStrand	25	chr2	44782977	44782994	protein_coding	Gtdc1	intron	ENSMUSG00000036890	NonProperStrand	13	1	-17.9973
chr5	74489228	74489318	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr7	133938792	133938872	protein_coding	Aldoa	utr3	ENSMUSG00000030695	ProperStrand	721	1	-1.2498
chr15	77793616	77793712	protein_coding	Eif3d	exon	ENSMUSG00000016554	ProperStrand	69	chr10	23505151	23505204	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.0487
chr2	105537177	105537194	protein_coding	Pax6	utr3	ENSMUSG00000027168	ProperStrand	13	chr18	35714148	35714287	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-10.4948
chr17	56257328	56257344	LTR	RLTR25B	ERVK	chr17RLTR25B56257276	NonProperStrand	75	chr4	131908357	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.1121
chr13	52742450	52742466	protein_coding	Syk	utr3	ENSMUSG00000021457	NonProperStrand	125	chr11	6318311	6319161	protein_coding	Ppia	exon	ENSMUSG00000071866	ProperStrand	127	1	-10.3343
chr6	144948338	144948409	protein_coding	Bcat1	utr3	ENSMUSG00000030268	ProperStrand	49	chr2	153034773	153034832	protein_coding	Tm9sf4	utr3	ENSMUSG00000068040	ProperStrand	27	2	-inf
chr13	51743579	51743662	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	chr11	77995191	77995254	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	3	-2.4064
chr7	20147533	20147551	protein_coding	Ppp1r37	utr5	ENSMUSG00000051403	ProperStrand	34	chr16	23111447	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-3.8359
chr7	116082708	116082775	protein_coding	Eif3f	intron	ENSMUSG00000031029	ProperStrand	69	chr9	89992711	89995309	protein_coding	Morf4l1	exon	ENSMUSG00000062270	ProperStrand	33	1	-14.2371
mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr14	77424372	77424388	protein_coding	9030625A04Rik	utr3	ENSMUSG00000044350	NonProperStrand	152	1	-4.1115
chr9	83490944	83490963	protein_coding	Sh3bgrl2	utr3	ENSMUSG00000032261	ProperStrand	21	chr6	125136484	125136584	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	1	-8.5482
chr10	44383105	44383124	LINE	Lx9	L1	chr10Lx944382840	NonProperStrand	2	chr4	117317054	117317103	protein_coding	Eri3	intron	ENSMUSG00000033423	ProperStrand	246	1	-18.1742
chr4	59734751	59734784	protein_coding	E130308A19Rik	intron	ENSMUSG00000045071	ProperStrand	41	chr11	6428095	6428156	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-6.5780
chr7	5937013	5937103	LINE	L1Md_F2	L1	chr7L1Md_F25936995	ProperStrand	1	chr7	5936851	5936931	LINE	L1_Mm	L1	chr7L1_Mm5936366	ProperStrand	1	1	-inf
chr2	164670111	164670129	protein_coding	Pltp	exon	ENSMUSG00000017754	ProperStrand	15	chr9	64024951	64024998	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	1	-11.9592
chr16	38417222	38417241	protein_coding	Pla1a	exon	ENSMUSG00000002847	ProperStrand	32	chr13	29683172	29683191	protein_coding	Cdkal1	intron	ENSMUSG00000006191	NonProperStrand	41	1	-15.3601
chr1	132742958	132742974	protein_coding	Pigr	exon	ENSMUSG00000026417	NonProperStrand	48	chr16	23111373	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	7	-13.2170
chrX	155557358	155557406	SINE	B1_Mm	Alu	chrXB1_Mm155557349	NonProperStrand	3	chr8	129468852	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	3	-inf
chr17	88376731	88376756	protein_coding	Msh6	intron	ENSMUSG00000005370	ProperStrand	150	chrX	69251174	69251190	protein_coding	Cnga2	intron	ENSMUSG00000005864	NonProperStrand	7	1	-15.9094
chr7	118212610	118212627	protein_coding	Eif4g2	utr3	ENSMUSG00000005610	ProperStrand	134	chr19	44188365	44188456	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	1	-6.2028
chr11	115696135	115696189	protein_coding	Llgl2	utr5	ENSMUSG00000020782	ProperStrand	62	chr1	95936068	95936084	protein_coding	Pdcd1	exon	ENSMUSG00000026285	ProperStrand	12	2	-21.6133
chr13	9833564	9833653	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr15	80064590	80064670	protein_coding	Smcr7l	utr5	ENSMUSG00000022412	ProperStrand	19	2	-11.6787
chr7	35216701	35216718	LINE	L1M4b	L1	chr7L1M4b35216550	ProperStrand	31	chr9	119842418	119846590	protein_coding	Gorasp1	exon	ENSMUSG00000032513	ProperStrand	7	1	-18.7072
chr3	10440013	10440030	protein_coding	Snx16	utr5	ENSMUSG00000027534	ProperStrand	4	chr5	121655052	121655112	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-9.2889
chr2	172459383	172459485	LTR	MLT1B	MaLR	chr2MLT1B172459354	NonProperStrand	4	chr13	100825070	100825111	protein_coding	Bdp1	exon	ENSMUSG00000049658	ProperStrand	159	4	-inf
chr5	77750108	77752594	protein_coding	Polr2b	exon	ENSMUSG00000029250	ProperStrand	68	chr12	100529470	100579633	protein_coding	Foxn3	exon	ENSMUSG00000033713	ProperStrand	74	2	-18.7428
chr2	90235292	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	158184092	158184137	snoRNA	ENSMUSG00000064995_SNORA71	.	ENSMUSG00000064995	ProperStrand	430	1	-1.1349
chr9	106183979	106183996	protein_coding	Poc1a	intron	ENSMUSG00000023345	ProperStrand	27	chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-8.0511
chr6	83719146	83719236	protein_coding	Tex261	utr3	ENSMUSG00000014748	ProperStrand	13	chr5	130300450	130300530	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-5.3899
chr9	59519848	59523460	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr8	32260335	32260424	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	3	-0.9279
chr16	21222715	21222787	protein_coding	Ephb3	utr3	ENSMUSG00000005958	ProperStrand	23	chr3	123210893	123210983	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-6.4095
chr16	33056574	33057234	protein_coding	Rpl35a	utr5	ENSMUSG00000060636	ProperStrand	33	chr11	69481334	69481424	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-4.3164
chr1	46133002	46133028	protein_coding	Dnahc7b	intron	ENSMUSG00000041144	NonProperStrand	57	chr2	26493366	26493425	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-6.4803
chr19	4962394	4962484	protein_coding	Mrpl11	exon	ENSMUSG00000024902	ProperStrand	6	chr16	23111389	23111500	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	5	-19.0950
chr13	105594424	105595041	protein_coding	Cwc27	exon	ENSMUSG00000021715	ProperStrand	14	chr11	69483190	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-5.1730
chr19	10702075	10702109	protein_coding	Ddb1	utr3	ENSMUSG00000024740	ProperStrand	304	chr1	162968213	162968272	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	2	-6.2273
chr18	89147742	89147775	protein_coding	Rttn	intron	ENSMUSG00000023066	ProperStrand	19	chr8	96560721	96560821	protein_coding	Nudt21	utr5	ENSMUSG00000031754	ProperStrand	33	1	-16.7872
chr15	75613190	75613290	protein_coding	Zc3h3	intron	ENSMUSG00000075600	ProperStrand	14	chr10	23505152	23505196	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.6795
chr14	55272400	55272458	protein_coding	Acin1	utr5	ENSMUSG00000022185	ProperStrand	67	chr7	118219685	118219727	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	3	-9.6662
chr9	122075466	122075482	protein_coding	Snrk	exon	ENSMUSG00000038145	NonProperStrand	97	chr15	82980189	82980227	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-6.1887
chr13	26478768	26478786	LTR	ORR1E	MaLR	chr13ORR1E26478655	ProperStrand	6	chr19	8963129	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-6.7266
chr12	8680957	8680973	protein_coding	Pum2	utr5	ENSMUSG00000020594	ProperStrand	39	chr6	83004437	83004453	protein_coding	Htra2	utr5	ENSMUSG00000068329	ProperStrand	17	1	-16.7184
chr13	34978668	34978685	protein_coding	Prpf4b	exon	ENSMUSG00000021413	ProperStrand	50	chr4	131908689	131908753	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.4812
chr8	28231722	28231745	protein_coding	Gpr124	exon	ENSMUSG00000031486	NonProperStrand	2	chr11	69481335	69481425	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-inf
chr8	36529522	36529538	protein_coding	Eri1	utr3	ENSMUSG00000031527	NonProperStrand	97	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-4.9074
chr10	13852064	13852080	protein_coding	Hivep2	exon	ENSMUSG00000015501	ProperStrand	7	chr7	52382236	52382313	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	2	-19.0129
chr14	48791364	48791382	protein_coding	Peli2	intron	ENSMUSG00000021846	NonProperStrand	1	chr15	79908955	79908997	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-inf
chr6	124235940	124236029	LINE	L1Md_F2	L1	chr6L1Md_F2124235955	ProperStrand	1	chr6	124235575	124235665	LTR	RLTR1D	ERV1	chr6RLTR1D124235348	ProperStrand	1	1	-inf
chrX	40944841	40944857	protein_coding	Gm362	exon	ENSMUSG00000078320	ProperStrand	129	chr1	88252857	88252902	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-5.1401
chr6	125124246	125129338	protein_coding	Ncapd2	exon	ENSMUSG00000038252	ProperStrand	170	chr16	23111385	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-1.0523
chr1	183853750	183853766	protein_coding	Enah	exon	ENSMUSG00000022995	NonProperStrand	33	chr11	69483136	69483191	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.5168
chr12	21338573	21338598	protein_coding	Adam17	intron	ENSMUSG00000052593	ProperStrand	20	chr15	34370545	34370609	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-5.6655
chr10	62270234	62270261	protein_coding	Tet1	utr3	ENSMUSG00000047146	ProperStrand	286	chr7	52381722	52381788	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	2	-7.4984
chr15	79826727	79826817	protein_coding	Pdgfb	utr3	ENSMUSG00000000489	ProperStrand	11	chr3	96067066	96067146	protein_coding	Hist2h4	exon	ENSMUSG00000091405	ProperStrand	18	2	-19.1719
chr8	73223056	73223074	protein_coding	Jund	exon	ENSMUSG00000071076	ProperStrand	50	chr7	116664819	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.8672
chr14	51427119	51427219	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr11	77996558	77996604	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-0.8350
chr4	120726869	120726886	protein_coding	Col9a2	exon	ENSMUSG00000028626	ProperStrand	35	chr2	120522317	120522350	protein_coding	Stard9	exon	ENSMUSG00000033705	ProperStrand	42	1	-15.1216
chr16	23110453	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	chr17	13112450	13112588	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	131	-inf
chr4	43505657	43505718	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr6	90640127	90640227	protein_coding	Iqsec1	exon	ENSMUSG00000034312	ProperStrand	23	1	-4.8772
chr2	173042385	173042401	protein_coding	Zbp1	exon	ENSMUSG00000027514	NonProperStrand	2	chr1	162965531	162965588	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-10.5602
chr2	164650361	164650381	protein_coding	Zswim1	exon	ENSMUSG00000017764	ProperStrand	68	chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	1	-8.5782
chrX	98479120	98479137	protein_coding	Med12	exon	ENSMUSG00000079487	ProperStrand	79	chr16	23111761	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.4838
chrX	148237897	148237955	protein_coding	Huwe1	utr5	ENSMUSG00000025261	ProperStrand	501	chr5	147646798	147646843	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	1	-3.8293
chr11	34130967	34131047	protein_coding	Dock2	intron	ENSMUSG00000020143	ProperStrand	18	chr11	43668854	43668944	protein_coding	Adra1b	intron	ENSMUSG00000050541	NonProperStrand	6	1	-18.9583
chr15	79471137	79471157	protein_coding	4933432B09Rik	exon	ENSMUSG00000042564	ProperStrand	25	chr10	39978328	39978451	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	20	-19.7159
chr14	45568497	45568518	lincRNA	Gm16976	intron	ENSMUSG00000085500	NonProperStrand	4	chr7	116663733	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-7.9103
chr4	46520290	46523315	protein_coding	Trim14	exon	ENSMUSG00000039853	NonProperStrand	1	chr5	135852878	135852930	protein_coding	Pom121	utr3	ENSMUSG00000053293	ProperStrand	127	1	-inf
chr5	108336237	108336920	protein_coding	Rpl5	exon	ENSMUSG00000058558	ProperStrand	235	chr19	8799036	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-3.2410
chr15	55822524	55822614	LTR	MTB_Mm-int	MaLR	chr15MTB_Mm-int55822401	ProperStrand	1	chr8	25015503	25015593	protein_coding	Zmat4	intron	ENSMUSG00000037492	ProperStrand	18	1	-inf
chr5	140239992	140240009	protein_coding	Ints1	exon	ENSMUSG00000029547	ProperStrand	45	chr15	76427769	76427925	protein_coding	Cpsf1	exon	ENSMUSG00000034022	ProperStrand	127	1	-12.3892
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr3	109858010	109858028	protein_coding	Ntng1	intron	ENSMUSG00000059857	ProperStrand	25	1	-9.5587
chr2	5924741	5924757	protein_coding	Upf2	intron	ENSMUSG00000043241	ProperStrand	21	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-7.9401
chr2	122110953	122110969	protein_coding	Duox2	exon	ENSMUSG00000068452	ProperStrand	3	chr16	23110828	23110919	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr9	46144432	46144449	LINE	Lx9	L1	chr9Lx946144122	ProperStrand	3	chr19	8798484	8798548	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-11.5227
chr6	54650524	54650585	protein_coding	2410066E13Rik	utr3	ENSMUSG00000038065	ProperStrand	6	chr17	24857798	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-6.7526
chr13	107752249	107752295	protein_coding	Kif2a	exon	ENSMUSG00000021693	ProperStrand	32	chr2	26493416	26493447	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-4.9420
chr11	115649555	115649593	protein_coding	2310067B10Rik	exon	ENSMUSG00000020747	ProperStrand	74	chr2	26768083	26768118	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	1	-7.9743
chr3	90291713	90291803	protein_coding	Ilf2	utr3	ENSMUSG00000001016	ProperStrand	28	chr3	88497898	88497978	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-8.9916
chr2	167836657	167836685	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	chr2	158182156	158182269	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-3.8834
chr19	8963027	8963127	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	chr11	69482354	69482396	snoRNA	ENSMUSG00000089542_snoU6-77	.	ENSMUSG00000089542	ProperStrand	138	1	-1.0348
chr4	135981397	135981422	protein_coding	Htr1d	intron	ENSMUSG00000070687	NonProperStrand	21	chr9	120037973	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-6.7764
chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	chr12	112779158	112779226	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-1.8855
chr5	115939529	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr6	115758041	115758131	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	31	-19.2994
chr8	123197986	123198068	protein_coding	Cox4i1	utr3	ENSMUSG00000031818	ProperStrand	31	chr16	23110966	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0062
chr6	67259126	67263871	protein_coding	Il12rb2	intron	ENSMUSG00000018341	ProperStrand	2	chr7	29136630	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-inf
chr5	108334196	108334336	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	chr8	73419657	73419771	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	29	-2.0383
chr18	63839024	63839120	protein_coding	Txnl1	exon	ENSMUSG00000024583	ProperStrand	7	chr11	77996560	77996596	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-10.4853
chr18	24821545	24821561	protein_coding	Mocos	intron	ENSMUSG00000039616	NonProperStrand	1	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-inf
chr11	55296236	55296258	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	chr19	8799581	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	2	-1.3474
chr6	131317860	131318408	protein_coding	Csda	exon	ENSMUSG00000030189	ProperStrand	86	chr9	64024466	64024509	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	1	-7.6467
chr17	24665464	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	chr11	106874217	106874255	tRNA	tRNA945-ArgCCG	.	1605822	ProperStrand	133	1	-3.4396
chrX	78380844	78380934	LINE	Lx8	L1	chrXLx878380775	ProperStrand	1	chrX	78380502	78380592	LTR	ORR1B1	MaLR	chrXORR1B178380238	ProperStrand	1	1	-inf
chr3	16070264	16070354	LTR	RLTR13D2	ERVK	chr3RLTR13D216069630	ProperStrand	1	chr3	16070434	16070524	LTR	RLTR19-int	ERVK	chr3RLTR19-int16070451	ProperStrand	1	1	-inf
chr7	52424207	52424224	protein_coding	Slc17a7	exon	ENSMUSG00000070570	NonProperStrand	3	chr4	131908317	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-7.2242
chrX	71101838	71101928	protein_coding-noncoding	L1cam	utr3	ENSMUSG00000031391	NonProperStrand	1	chrX	71101718	71101808	protein_coding	L1cam	intron	ENSMUSG00000031391	NonProperStrand	2	1	-inf
chrX	150765543	150765559	LINE	L1_Mus2	L1	chrXL1_Mus2150765117	NonProperStrand	49	chr17	3115327	3115373	protein_coding	Scaf8	utr5	ENSMUSG00000046201	ProperStrand	126	1	-12.2328
chr9	70053876	70053955	LINE	L1MB7	L1	chr9L1MB770053633	NonProperStrand	1	chr8	26972888	26972904	protein_coding	Kcnu1	exon	ENSMUSG00000031576	NonProperStrand	8	1	-inf
chr9	110031716	110031806	SINE	B1_Mus1	Alu	chr9B1_Mus1110031707	ProperStrand	1	chr9	110032034	110032124	SINE	B3	B2	chr9B3110031963	NonProperStrand	1	1	-inf
chrX	20240200	20240217	protein_coding	Uba1	utr5	ENSMUSG00000001924	ProperStrand	156	chr16	57391758	57391792	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	1	-5.9027
chr8	81127576	81127652	protein_coding	Slc10a7	intron	ENSMUSG00000031684	ProperStrand	55	chr13	22133063	22133135	protein_coding	Hist1h4i	exon	ENSMUSG00000060639	ProperStrand	8	1	-17.3253
chr7	24779190	24779213	SINE	ID_B1	B4	chr7ID_B124779183	NonProperStrand	54	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-7.9380
chr1	36884137	36884227	protein_coding	Tmem131	exon	ENSMUSG00000026116	ProperStrand	129	chr15	79656357	79656437	protein_coding	Cbx6	utr3	ENSMUSG00000089715	ProperStrand	16	1	-14.4668
chr8	124475493	124475509	protein_coding	Banp	intron	ENSMUSG00000025316	NonProperStrand	34	chr8	18595380	18595415	protein_coding	Mcph1	utr5	ENSMUSG00000039842	ProperStrand	34	1	-15.5827
chr15	88693854	88693954	protein_coding	Pim3	exon	ENSMUSG00000035828	ProperStrand	66	chr4	131866226	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-3.4891
chr11	69481267	69484119	protein_coding	Eif4a1	exon	ENSMUSG00000059796	ProperStrand	108	chr4	131908236	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-3.5765
chr8	125022331	125022403	protein_coding	Fam38a	exon	ENSMUSG00000014444	ProperStrand	132	chr7	63394298	63401152	protein_coding	Herc2	exon	ENSMUSG00000030451	ProperStrand	66	1	-11.5385
chr12	15135897	15135987	LINE	L1Md_F2	L1	chr12L1Md_F215135719	ProperStrand	1	chr12	15136262	15136342	SINE	RSINE1	B4	chr12RSINE115136241	NonProperStrand	1	1	-inf
chr7	135868698	135883732	protein_coding	Mcmbp	utr5	ENSMUSG00000048170	ProperStrand	87	chr7	116663649	116663711	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.8983
chr4	132530099	132530116	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	chr4	56910554	56910618	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	2	-4.5912
chr2	25915656	25915672	protein_coding	Nacc2	exon	ENSMUSG00000026932	ProperStrand	98	chr4	117317829	117317929	protein_coding	Eri3	intron	ENSMUSG00000033423	ProperStrand	246	1	-9.4998
chr4	131825994	131826127	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	chr7	116663665	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-0.7022
chr9	22290714	22290730	protein_coding	Bbs9	intron	ENSMUSG00000035919	NonProperStrand	9	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-11.0757
chr8	41569583	41569600	protein_coding	Zdhhc2	utr3	ENSMUSG00000039470	NonProperStrand	85	chr4	131908689	131908795	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-2.6906
chr9	59516440	59516896	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr5	92485103	92485211	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	42	-20.4898
chr8	13792100	13792180	protein_coding	Upf3a	exon	ENSMUSG00000038398	ProperStrand	6	chr1	136485465	136489936	protein_coding	Kdm5b	utr5	ENSMUSG00000042207	ProperStrand	223	1	-15.4276
chr1	36026407	36026424	LINE	L1MD	L1	chr1L1MD36026217	NonProperStrand	2	chr16	23111450	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-8.0851
chr10	55737066	55737156	protein_coding	D630037F22Rik	utr3	ENSMUSG00000038122	ProperStrand	4	chr2	26493366	26493446	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-9.2834
chr5	120577063	120577079	protein_coding	Rbm19	exon	ENSMUSG00000029594	ProperStrand	40	chr8	87553003	87553067	protein_coding	2310036O22Rik	intron	ENSMUSG00000041203	ProperStrand	4	1	-19.2351
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr7	109149271	109149287	protein_coding	Numa1	exon	ENSMUSG00000066306	NonProperStrand	171	1	-5.7254
chr15	77790118	77790203	protein_coding	Eif3d	exon	ENSMUSG00000016554	ProperStrand	69	chr16	57391761	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	1	-7.5143
chrX	159236392	159249243	protein_coding	Txlng	exon	ENSMUSG00000038344	ProperStrand	45	chr9	15118323	15118377	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-6.7385
chr4	136571475	136571501	protein_coding-noncoding	Zbtb40	utr3	ENSMUSG00000060862	ProperStrand	5	chr2	164460516	164460532	protein_coding	Wfdc16	utr3	ENSMUSG00000070530	ProperStrand	15	1	-20.1544
chr4	134088634	134090876	protein_coding	Fam54b	utr5	ENSMUSG00000046671	ProperStrand	10	chr10	23505158	23505238	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.3364
chr2	164253141	164253159	protein_coding	Sdc4	intron	ENSMUSG00000017009	NonProperStrand	4	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-9.1208
chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	chr4	155497985	155498037	protein_coding	9430015G10Rik	intron	ENSMUSG00000059939	ProperStrand	17	2	-16.2466
chr1	90171489	90171569	protein_coding-noncoding	Hjurp	utr3	ENSMUSG00000044783	ProperStrand	3	chr3	68889039	68889129	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-9.4435
chr2	130101984	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	chr18	33954816	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	23	-4.1302
chr1	180932679	180932751	protein_coding	Smyd3	intron	ENSMUSG00000055067	ProperStrand	231	chr13	23667661	23667713	protein_coding	Hist1h3d	utr5	ENSMUSG00000062808	ProperStrand	7	1	-15.0422
chr2	35037962	35039312	protein_coding	Rab14	exon	ENSMUSG00000026878	ProperStrand	21	chr11	68886927	68887017	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-6.1936
chr8	63401717	63401817	protein_coding	Clcn3	exon	ENSMUSG00000004319	ProperStrand	93	chr4	130305581	130305621	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	1	-9.0308
chr2	90235297	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	23770362	23770378	protein_coding	Taar7f	exon	ENSMUSG00000060825	NonProperStrand	40	1	-5.2466
chr5	144324209	144324309	protein_coding	2810453I06Rik	exon	ENSMUSG00000048910	ProperStrand	22	chr4	131908688	131908750	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	18	-inf
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr8	119917815	119917831	protein_coding	4933407C03Rik	intron	ENSMUSG00000034390	NonProperStrand	32	1	-9.8591
chr14	52829494	52829512	lincRNA	Gm16682	intron	ENSMUSG00000085736	ProperStrand	6	chr9	56266647	56266665	protein_coding	Hmg20a	utr5	ENSMUSG00000032329	ProperStrand	87	1	-17.2064
chr7	117781349	117781429	SINE	PB1D10	Alu	chr7PB1D10117781349	NonProperStrand	1	chr7	117421538	117421628	protein_coding	Swap70	intron	ENSMUSG00000031015	NonProperStrand	3	1	-inf
chr8	98393470	98394698	protein_coding	Got2	exon	ENSMUSG00000031672	ProperStrand	85	chr7	116663719	116663767	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.9352
chr3	82816758	82816774	protein_coding	Fgg	exon	ENSMUSG00000033860	NonProperStrand	321	chr18	35716696	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-1.6083
chrX	94950763	94950853	LINE	Lx2	L1	chrXLx294950508	NonProperStrand	1	chr17	50688891	50688971	protein_coding	Plcl2	intron	ENSMUSG00000038910	NonProperStrand	7	1	-inf
chr14	29319237	29319253	protein_coding	Wnt5a	utr5	ENSMUSG00000021994	NonProperStrand	26	chr8	13416897	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-8.1274
chr2	90235293	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr14	14731050	14731067	protein_coding	Gm281	intron	ENSMUSG00000084902	ProperStrand	23	1	-6.3423
chr13	9833555	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr7	52738571	52738671	protein_coding	Dhdh	intron	ENSMUSG00000011382	ProperStrand	5	1	-10.0546
chr11	100235391	100235491	protein_coding	Jup	exon	ENSMUSG00000001552	ProperStrand	123	chr1	162967510	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-2.2154
chr17	12391747	12391878	protein_coding	Agpat4	intron	ENSMUSG00000023827	ProperStrand	15	chr8	129468746	129468765	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-7.1564
chr5	151260378	151260395	protein_coding	Fry	exon	ENSMUSG00000056602	ProperStrand	24	chr9	120039566	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-5.0594
chr16	17147690	17147714	protein_coding	Ydjc	exon	ENSMUSG00000041774	ProperStrand	7	chr1	162967508	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-7.7490
chr2	25563070	25563086	antisense	A230005M16Rik	.	ENSMUSG00000087612	ProperStrand	103	chr3	88439930	88439953	protein_coding	Arhgef2	exon	ENSMUSG00000028059	ProperStrand	13	1	-15.3484
chr9	15118244	15118322	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	chr8	13876097	13876218	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	7	-1.3380
chr7	150429747	150429763	protein_coding	Kcnq1	intron	ENSMUSG00000009545	NonProperStrand	133	chr4	116828378	116828453	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-6.7986
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr11	92960818	92960835	protein_coding	Car10	utr5	ENSMUSG00000056158	ProperStrand	25	1	-10.3603
chr11	88805781	88808479	protein_coding	Scpep1	exon	ENSMUSG00000000278	ProperStrand	54	chr19	60866468	60866504	protein_coding	Eif3a	utr5	ENSMUSG00000024991	ProperStrand	287	1	-10.3883
chr8	19722542	19722622	LINE	L1VL4	L1	chr8L1VL419722468	NonProperStrand	1	chr8	19966231	19966321	lincRNA	Gm17279	intron	ENSMUSG00000091588	ProperStrand	5	1	-inf
chr3	85931671	85931714	protein_coding	Sh3d19	utr3	ENSMUSG00000028082	ProperStrand	58	chr16	23111455	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-2.5009
mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr5	147645816	147645832	protein_coding	Rpl21	exon	ENSMUSG00000041453	ProperStrand	112	1	-4.6912
chr4	118934851	118934876	protein_coding	Cldn19	utr3	ENSMUSG00000066058	NonProperStrand	4	chr3	123210854	123210892	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-7.3786
chr1	193925421	193925437	protein_coding	Rcor3	intron	ENSMUSG00000037395	ProperStrand	25	chr7	36558404	36558426	protein_coding	Zfp507	utr3	ENSMUSG00000044452	ProperStrand	66	1	-14.8923
chr7	151765212	151765228	antisense	Gm10574	.	ENSMUSG00000073778	ProperStrand	357	chr7	123477282	123477612	protein_coding	Rps13	exon	ENSMUSG00000090862	ProperStrand	36	1	-10.7705
chr2	179322379	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr5	93473404	93473421	protein_coding	Sowahb	exon	ENSMUSG00000045314	ProperStrand	16	1	-13.8965
chr3	96363884	96363910	protein_coding	Txnip	exon	ENSMUSG00000038393	ProperStrand	172	chr11	69483187	69483278	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	4	-4.2742
chr2	17967343	17967359	protein_coding	2810030E01Rik	exon	ENSMUSG00000054074	NonProperStrand	3	chr16	23110843	23110860	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr11	114588864	114588880	protein_coding	Dnaic2	utr5	ENSMUSG00000034706	ProperStrand	10	chr2	26766780	26766857	snoRNA	ENSMUSG00000065258_SNORD24	.	ENSMUSG00000065258	ProperStrand	130	3	-23.6524
chr7	122612438	122612457	LTR	MTEa	MaLR	chr7MTEa122612326	NonProperStrand	9	chr9	15119646	15119766	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-14.8450
chr8	74942998	74943028	protein_coding	Eps15l1	intron	ENSMUSG00000006276	ProperStrand	42	chr7	148634702	148634792	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-4.6657
chr7	30043447	30043513	protein_coding	Spint2	exon	ENSMUSG00000074227	ProperStrand	82	chr10	23505152	23505231	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-0.8385
chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr1	39605591	39605674	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	3	-5.9389
chr10	104819609	105010997	protein_coding	Tmtc2	intron	ENSMUSG00000036019	ProperStrand	72	chrX	34622906	34623037	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	3	-7.3358
chr14	56358287	56358377	protein_coding	Dhrs1	intron	ENSMUSG00000002332	ProperStrand	14	chr10	78340429	78340519	protein_coding	Olfr1355	intron	ENSMUSG00000062873	ProperStrand	1	1	-inf
chr7	71471656	71471698	protein_coding	Mtmr10	exon	ENSMUSG00000030522	ProperStrand	6	chr16	23111473	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-5.4240
chr11	58159525	58159618	protein_coding	Sh3bp5l	exon	ENSMUSG00000013646	ProperStrand	7	chr7	19886641	19886681	tRNA	tRNA86-SeCTCA	.	189061	ProperStrand	34	1	-18.2721
chr6	121203404	121203423	protein_coding	Usp18	intron	ENSMUSG00000030107	NonProperStrand	1	chr3	123210903	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-inf
chr5	28657661	28657706	protein_coding	Rbm33	exon	ENSMUSG00000048271	ProperStrand	78	chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-7.3380
chr17	24562498	24562533	protein_coding	Rnps1	utr3	ENSMUSG00000034681	ProperStrand	40	chr10	23505152	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.8310
chr7	52381719	52381757	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	chr18	35714144	35714294	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	5	-0.9900
chr12	11323504	11324585	protein_coding	Smc6	exon	ENSMUSG00000020608	ProperStrand	15	chr9	15119631	15119703	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.2385
chr8	28338045	28338062	protein_coding	Adrb3	exon	ENSMUSG00000031489	NonProperStrand	2	chr4	131865855	131865917	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-8.7800
chr5	115983444	115983460	protein_coding	Pxn	intron	ENSMUSG00000029528	ProperStrand	171	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-5.1761
chr2	61892317	61892334	protein_coding	Slc4a10	intron	ENSMUSG00000026904	ProperStrand	40	chr7	116663633	116663710	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-5.5563
chr2	112176055	112178026	protein_coding	Slc12a6	exon	ENSMUSG00000027130	ProperStrand	35	chr7	116663634	116663714	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.4745
chr19	8963027	8963084	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	chr13	22088476	22088508	tRNA	tRNA975-GlnCTG	.	191714	ProperStrand	4	2	-12.7375
chr17	51879363	51879405	protein_coding	Satb1	exon	ENSMUSG00000023927	ProperStrand	62	chr9	81949792	81949813	protein_coding	Mei4	intron	ENSMUSG00000043289	NonProperStrand	42	1	-13.9645
chr8	87366658	87366696	protein_coding	Calr	exon	ENSMUSG00000003814	ProperStrand	232	chr17	26350164	26350246	protein_coding	Itfg3	utr3	ENSMUSG00000024187	ProperStrand	30	1	-12.0026
chr15	72638704	72638722	protein_coding	Trappc9	intron	ENSMUSG00000047921	NonProperStrand	53	chr11	77996565	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-6.3370
chr15	78450908	78450925	protein_coding	Cyth4	intron	ENSMUSG00000018008	NonProperStrand	2	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-10.5602
mmu-miR-6240	3	23	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr11	101466284	101466351	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	1	-1.8538
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr17	46541126	46541148	misc_RNA	7SK	.	ENSMUSG00000065808	ProperStrand	16	1	-10.4721
chr17	26260932	26261011	protein_coding	Mrpl28	intron	ENSMUSG00000024181	ProperStrand	10	chr17	26167966	26168056	protein_coding	Rab11fip3	intron	ENSMUSG00000037098	ProperStrand	32	1	-18.1595
chr7	134986031	134986048	protein_coding	Stx4a	exon	ENSMUSG00000030805	NonProperStrand	11	chr7	4691730	4691754	protein_coding	Suv420h2	utr5	ENSMUSG00000059851	NonProperStrand	70	1	-16.4723
chr9	21199289	21199817	protein_coding	Ilf3	exon	ENSMUSG00000032178	ProperStrand	164	chr15	5068442	5068478	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-4.1255
chr17	30933173	30933190	protein_coding	Dnahc8	intron	ENSMUSG00000033826	NonProperStrand	40	chr16	23111372	23111420	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.8604
chr19	40855849	40855935	LINE	Lx	L1	chr19Lx40855433	NonProperStrand	1	chr14	52829460	52829476	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-inf
chr2	3226775	3230189	protein_coding	Nmt2	exon	ENSMUSG00000026643	ProperStrand	21	chr4	131865855	131865977	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	5	-15.5931
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr7	67125761	67125808	snoRNA	ENSMUSG00000089375_Snord107	.	ENSMUSG00000089375	ProperStrand	451	1	-3.3514
chr3	82816756	82816774	protein_coding	Fgg	exon	ENSMUSG00000033860	NonProperStrand	321	chr1	24619347	24619450	protein_coding	Gm10222	exon	ENSMUSG00000067736	NonProperStrand	11	1	-13.4176
chr11	94431655	94431929	protein_coding	Acsf2	exon	ENSMUSG00000076435	ProperStrand	34	chr1	162967512	162967535	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.5455
chr12	110918202	110918221	snoRNA	ENSMUSG00000065749_AF357428	.	ENSMUSG00000065749	ProperStrand	218	chr14	33005094	33005194	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-1.7498
chr16	17927474	17927540	protein_coding	Slc25a1	exon	ENSMUSG00000003528	ProperStrand	23	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	2	-14.0887
chrX	20096687	20096703	protein_coding	Phf16	utr3	ENSMUSG00000037315	NonProperStrand	8	chr4	122970392	122970471	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-11.5405
chr12	75047455	75047507	protein_coding	Hif1a	utr3	ENSMUSG00000021109	ProperStrand	20	chr9	66566868	66566890	protein_coding	Car12	intron	ENSMUSG00000032373	ProperStrand	20	1	-17.5916
chr9	120039579	120039679	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	chr11	115274342	115274368	tRNA	tRNA1022-ArgCCT	.	153702	ProperStrand	28	1	-4.7581
chr11	48700946	48700962	protein_coding	Gm5431	utr3	ENSMUSG00000058163	NonProperStrand	1	chr16	23110984	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	chr2	22444979	22445025	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-3.8501
chrX	54499648	54502153	protein_coding	Arhgef6	exon	ENSMUSG00000031133	ProperStrand	20	chr5	151755616	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-9.9579
chr2	103575056	103579918	protein_coding	Nat10	exon	ENSMUSG00000027185	ProperStrand	124	chr14	76247795	76247839	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-2.8421
chr2	84518642	84518742	protein_coding	Med19	exon	ENSMUSG00000027080	ProperStrand	22	chrX	34622906	34622949	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	13	-25.1583
chrX	84483719	84483751	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr5	111121066	111121161	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-1.7884
chrX	102250499	102250540	lincRNA	5530601H04Rik	intron	ENSMUSG00000087174	ProperStrand	15	chr16	23110554	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-8.4018
chr7	148633883	148634639	protein_coding	Rplp2	exon	ENSMUSG00000025508	ProperStrand	106	chr7	148634805	148634842	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-2.9443
chr2	29870053	29870127	protein_coding	Spna2	intron	ENSMUSG00000057738	ProperStrand	222	chr17	24665439	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-2.5322
chr11	48620325	48620415	protein_coding	Trim41	utr3	ENSMUSG00000040365	ProperStrand	11	chr16	23110876	23110956	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.6241
chr2	126563733	126567874	protein_coding	Usp8	exon	ENSMUSG00000027363	ProperStrand	40	chr3	108357545	108357589	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-5.3254
chr12	70413651	70415416	protein_coding	Nemf	exon	ENSMUSG00000020982	ProperStrand	77	chr18	35714204	35714250	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-2.9916
chr2	158451026	158451043	protein_coding	Actr5	exon	ENSMUSG00000037761	NonProperStrand	94	chr13	49779719	49779802	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	3	-14.0463
chr11	58795625	58795642	protein_coding	Trim11	exon	ENSMUSG00000020455	ProperStrand	43	chr15	36538333	36538385	protein_coding	Pabpc1	utr5	ENSMUSG00000022283	ProperStrand	908	2	-13.6112
chr13	113291323	113291400	protein_coding	Il6st	exon	ENSMUSG00000021756	ProperStrand	34	chr1	162968447	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-7.2080
chr17	6232006	6232022	protein_coding	Tulp4	exon	ENSMUSG00000034377	NonProperStrand	265	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-6.4156
chr5	19397394	19397413	protein_coding	Magi2	intron	ENSMUSG00000040003	ProperStrand	49	chr11	97642948	97643091	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.8235
chr14	15572350	15572367	protein_coding	Slc4a7	exon	ENSMUSG00000021733	ProperStrand	24	chr16	57391629	57391675	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	1	-12.1606
chr11	107346914	107347102	protein_coding	Psmd12	exon	ENSMUSG00000020720	ProperStrand	31	chr10	39978351	39978431	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-6.7654
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chrX	34622906	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	5	-8.3305
chr2	56967310	56967327	protein_coding	Nr4a2	utr5	ENSMUSG00000026826	NonProperStrand	9	chr19	8963053	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.8692
chr4	147968631	147968694	protein_coding	Srm	utr3	ENSMUSG00000006442	ProperStrand	19	chr10	23505152	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-14.1394
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr18	20733476	20737541	protein_coding	Dsg2	exon	ENSMUSG00000044393	ProperStrand	60	1	-4.4627
chr9	108239059	108239149	protein_coding	Rhoa	exon	ENSMUSG00000007815	ProperStrand	45	chr5	108336376	108336456	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-5.4406
chr9	26440743	26440759	DNA	MER5A	MER1_type	chr9MER5A26440741	ProperStrand	108	chr15	79908930	79908956	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-4.3398
chr14	9264213	9275414	protein_coding	4930452B06Rik	exon	ENSMUSG00000021747	ProperStrand	8	chr4	131865855	131865930	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-9.1913
chr2	130100775	130100825	protein_coding	Nop56	exon	ENSMUSG00000027405	ProperStrand	125	chr5	130300468	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.3535
chr8	124406860	124406950	protein_coding	Slc7a5	utr3	ENSMUSG00000040010	ProperStrand	166	chr2	26494722	26494802	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.4356
chr17	27696581	27700200	protein_coding	Hmga1	exon	ENSMUSG00000046711	ProperStrand	180	chr16	23111369	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-0.9447
chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	chr17	27559700	27559717	protein_coding	Grm4	utr3	ENSMUSG00000063239	ProperStrand	147	1	-7.6078
chr14	31676091	31676107	protein_coding	Tmem110	exon	ENSMUSG00000006526	ProperStrand	13	chr15	31522761	31523276	protein_coding	Cct5	exon	ENSMUSG00000022234	ProperStrand	116	1	-15.1022
chr6	33922223	33922313	protein_coding	Exoc4	utr3	ENSMUSG00000029763	ProperStrand	120	chr9	120039538	120039618	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-3.7959
chr14	87659491	87659512	LTR	MTEa	MaLR	chr14MTEa87659331	NonProperStrand	83	chr5	121655104	121655132	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.1529
chr5	74489261	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr2	121176333	121176349	protein_coding	Ppip5k1	exon	ENSMUSG00000033526	ProperStrand	85	1	-4.9446
chr13	101490169	101490264	protein_coding	Cdk7	intron	ENSMUSG00000069089	ProperStrand	12	chr7	29136633	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.3856
chr4	131908356	131908463	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	2	-2.7866
chr10	120709244	120712786	protein_coding	Tbc1d30	exon	ENSMUSG00000052302	ProperStrand	233	chr5	116012440	116012516	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	1	-7.4399
chr5	65687269	65693179	protein_coding	Rfc1	exon	ENSMUSG00000029191	ProperStrand	53	chr4	131865891	131865937	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.9636
chr10	126532147	126532163	protein_coding	Os9	utr3	ENSMUSG00000040462	NonProperStrand	28	chr18	35716730	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.5142
chr10	80109129	80109178	protein_coding	Btbd2	exon	ENSMUSG00000003344	ProperStrand	68	chr5	121655031	121655121	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.5158
chr10	128153086	128153186	protein_coding	Pmel	exon	ENSMUSG00000025359	ProperStrand	5	chr19	8798754	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-9.8951
chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	chr3	58396154	58396227	protein_coding	2810407C02Rik	utr3	ENSMUSG00000075700	ProperStrand	8	1	-13.9692
chr2	130102089	130102113	protein_coding-noncoding	Nop56	utr5	ENSMUSG00000027405	ProperStrand	19	chr2	130101986	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-7.6478
chr6	71766209	71766235	protein_coding	Mrpl35	exon	ENSMUSG00000052962	ProperStrand	3	chr5	108336375	108336434	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-18.6560
chr16	75761550	75765200	protein_coding	Hspa13	exon	ENSMUSG00000032932	NonProperStrand	57	chr5	108332399	108332707	protein_coding	Rpl5	exon	ENSMUSG00000058558	ProperStrand	235	2	-16.7837
chr10	104351987	104352007	Other	RMER1A	Other	chr10RMER1A104351322	ProperStrand	15	chr14	76247753	76247787	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-6.9035
chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr14	33005091	33005236	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	6	-0.7624
chr3	107912006	107912069	protein_coding	Gnai3	utr3	ENSMUSG00000000001	ProperStrand	48	chr12	112779231	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	4	-16.0835
chr7	130135522	130135780	protein_coding	Rbbp6	exon	ENSMUSG00000030779	ProperStrand	46	chr7	52378398	52378476	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	1	-9.0377
chr4	115994943	115995033	protein_coding	Mast2	exon	ENSMUSG00000003810	ProperStrand	37	chr2	163546870	163546950	protein_coding	Pkig	utr5	ENSMUSG00000035268	ProperStrand	13	1	-17.3581
chr5	143667133	143667310	protein_coding	Actb	exon	ENSMUSG00000029580	ProperStrand	446	chr12	76769560	76769640	protein_coding	Wdr89	intron	ENSMUSG00000045690	ProperStrand	7	1	-13.7231
chr7	120709344	120709370	protein_coding	Far1	intron	ENSMUSG00000030759	ProperStrand	72	chr4	131865868	131865989	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	10	-21.5165
chr19	10701163	10701197	protein_coding	Ddb1	exon	ENSMUSG00000024740	ProperStrand	304	chr2	26493365	26493488	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	6	-8.3402
chr15	38855414	38855489	protein_coding	Fzd6	intron	ENSMUSG00000022297	ProperStrand	15	chr16	23110966	23110988	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.0842
chr6	54018606	54018696	protein_coding	Chn2	intron	ENSMUSG00000004633	NonProperStrand	4	chr6	88380865	88380945	protein_coding	Eefsec	intron	ENSMUSG00000033216	NonProperStrand	6	1	-19.4007
chr5	65779662	65779845	protein_coding	Rpl9	utr3	ENSMUSG00000047215	ProperStrand	113	chr19	8963031	8963128	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.3000
chr5	114910887	114910987	LTR	MTB	MaLR	chr5MTB114910702	NonProperStrand	1	chr13	46862888	46862956	snoRNA	ENSMUSG00000064558_SNORA55	.	ENSMUSG00000064558	ProperStrand	187	1	-inf
chr8	97387562	97387652	protein_coding	Polr2c	utr3	ENSMUSG00000031783	ProperStrand	16	chr17	24857796	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.7325
chr5	77694818	77694835	protein_coding	Rest	intron	ENSMUSG00000029249	ProperStrand	136	chr19	8799581	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-5.1618
chr8	113579024	113579064	protein_coding	Aars	exon	ENSMUSG00000031960	ProperStrand	355	chr17	28301702	28301724	protein_coding	Scube3	exon	ENSMUSG00000038677	ProperStrand	13	1	-12.8690
chr13	107737212	107737228	protein_coding	Dimt1	utr5	ENSMUSG00000021692	ProperStrand	185	chr1	95317728	95317955	protein_coding	Hdlbp	exon	ENSMUSG00000034088	ProperStrand	97	1	-10.0896
chr11	67167096	67167112	protein_coding	Myh13	exon	ENSMUSG00000060180	ProperStrand	145	chr10	88872358	88872375	protein_coding	Gas2l3	utr3	ENSMUSG00000074802	ProperStrand	16	1	-14.2307
chrX	7823684	7823719	protein_coding	Ftsj1	exon	ENSMUSG00000031171	ProperStrand	2	chr1	88247743	88247799	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-12.5019
chr10	5978977	5979029	protein_coding	Zbtb2	utr3	ENSMUSG00000075327	ProperStrand	2	chr19	8799027	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-13.2620
chr5	65952377	65952395	protein_coding	Ube2k	intron	ENSMUSG00000029203	ProperStrand	289	chr19	8798503	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-4.1185
chr5	31364159	31364220	protein_coding	Cad	exon	ENSMUSG00000013629	ProperStrand	260	chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	1	-6.5275
chr15	6709494	6709594	protein_coding	Rictor	exon	ENSMUSG00000050310	ProperStrand	21	chr11	69481343	69481378	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.1963
chr9	65127126	65127142	protein_coding	Cilp	exon	ENSMUSG00000042254	ProperStrand	212	chr1	63225577	63225656	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-4.2179
chr9	62641459	62641553	protein_coding	Fem1b	utr3	ENSMUSG00000032244	ProperStrand	111	chr9	120038624	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.9906
chr7	54024333	54024423	protein_coding	Hps5	exon	ENSMUSG00000014418	ProperStrand	3	chr11	69481366	69481432	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-9.3812
chrX	115443369	115443385	LINE	Lx3A	L1	chrXLx3A115443230	NonProperStrand	12	mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	1	-9.1521
chr5	108523188	108523266	protein_coding	Mtf2	exon	ENSMUSG00000029267	ProperStrand	39	chr11	6428032	6428122	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.9898
mmu-miR-6516-3p	5	22	miRNA	mmu-miR-6516-3p	.	mmu-miR-6516-3p	ProperStrand	4	chr12	106269284	106269384	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-9.7090
chr14	98738585	98738601	LINE	L1MEf	L1	chr14L1MEf98738356	ProperStrand	8	chr8	74843878	74843946	protein_coding	Klf2	exon	ENSMUSG00000055148	ProperStrand	82	1	-16.7448
chr2	91436263	91436335	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	chr7	67125763	67125830	snoRNA	ENSMUSG00000089375_Snord107	.	ENSMUSG00000089375	ProperStrand	451	2	-6.0853
chr1	162965536	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr17	71990923	71990974	snoRNA	ENSMUSG00000092713_CT010429.1	.	ENSMUSG00000092713	ProperStrand	182	1	-1.4386
chr15	10641135	10641235	protein_coding	Rai14	intron	ENSMUSG00000022246	ProperStrand	180	chr2	22444472	22444540	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-5.6071
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr1	141319671	141319687	protein_coding	Zbtb41	utr5	ENSMUSG00000033964	NonProperStrand	145	1	-4.2003
chr2	117096598	117096614	protein_coding	Fam98b	exon	ENSMUSG00000027349	ProperStrand	3	chr10	23505188	23505238	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-6.9610
chr2	24825186	24827046	protein_coding	Wdr85	exon	ENSMUSG00000026975	ProperStrand	323	chr11	106362303	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	3	-6.9612
chr13	9833549	9833644	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr2	26768096	26768120	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	2	-1.7111
chr7	29136635	29136655	protein_coding	Rps16	intron	ENSMUSG00000037563	ProperStrand	191	chr12	106269285	106269385	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	2	-3.7388
chr9	52494362	52494442	LTR	RLTR13B1	ERVK	chr9RLTR13B152494010	NonProperStrand	1	chr9	52494975	52495065	SINE	B4	B4	chr9B452494875	NonProperStrand	1	1	-inf
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr2	4829164	4829180	protein_coding	Sephs1	utr3	ENSMUSG00000026662	NonProperStrand	271	1	-10.1301
chr7	26546450	26546468	protein_coding	Axl	exon	ENSMUSG00000002602	ProperStrand	6	chr8	3642156	3642172	protein_coding	Stxbp2	intron	ENSMUSG00000004626	NonProperStrand	73	1	-17.4301
chr14	19101530	19101620	protein_coding	Rpl15	exon	ENSMUSG00000012405	ProperStrand	145	chr9	15119646	15119726	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.2449
chr15	99329179	99329195	protein_coding	Faim2	utr3	ENSMUSG00000023011	ProperStrand	45	chr4	131865860	131865950	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.2312
chr4	133628737	133628753	protein_coding	Aim1l	exon	ENSMUSG00000012123	NonProperStrand	3	chr16	23111383	23111416	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-6.9982
chr5	125509151	125509168	protein_coding	Ncor2	exon	ENSMUSG00000029478	ProperStrand	377	chr14	52816779	52816795	protein_coding	Supt16h	exon	ENSMUSG00000035726	ProperStrand	193	1	-7.3005
chrX	62471611	62471628	LINE	L1MB8	L1	chrXL1MB862471535	ProperStrand	1	chr2	130103751	130103825	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-inf
chr11	55302603	55302693	protein_coding	G3bp1	exon	ENSMUSG00000018583	ProperStrand	106	chr4	131865380	131865449	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-2.9596
chr19	44188392	44188472	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr2	168478102	168478192	protein_coding	Atp9a	exon	ENSMUSG00000027546	ProperStrand	16	1	-10.4721
chr1	182828269	182828345	protein_coding	Lefty2	utr3	ENSMUSG00000066652	ProperStrand	48	chr12	112779231	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-5.2084
mmu-miR-6238	2	20	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr2	32818800	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	3	-7.3564
chr16	48997421	48997490	protein_coding	C330027C09Rik	intron	ENSMUSG00000033031	ProperStrand	30	chr15	79908929	79908954	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-6.8444
chr2	157119950	157123292	protein_coding	Rpn2	exon	ENSMUSG00000027642	ProperStrand	363	chr11	62418019	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	2	-3.9880
chr1	63225587	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	chrX	71517838	71517960	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	10	-14.2002
chr10	127520966	127527078	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr18	35714146	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	4	-1.8411
chr8	13876177	13876226	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	chr2	130101241	130101269	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-1.1058
chr2	133378813	133378830	protein_coding	Bmp2	utr5	ENSMUSG00000027358	NonProperStrand	17	chr4	131908356	131908432	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.5556
chr8	3524162	3524327	protein_coding	Pnpla6	exon	ENSMUSG00000004565	ProperStrand	60	chr5	107412077	107412167	protein_coding	Cdc7	exon	ENSMUSG00000029283	ProperStrand	3	1	-20.1674
chr7	29137397	29137416	protein_coding	Rps16	exon	ENSMUSG00000037563	ProperStrand	191	chr3	108357255	108357351	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	4	-8.7770
chr17	46916272	46916327	protein_coding	Rpl7l1	exon	ENSMUSG00000063888	ProperStrand	37	chr2	26494736	26494826	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.0004
chr9	99483993	99484009	protein_coding	Dbr1	exon	ENSMUSG00000032469	ProperStrand	162	chr11	97642952	97643007	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-0.9808
chr6	72848823	72848840	protein_coding	Kcmf1	intron	ENSMUSG00000055239	ProperStrand	26	chr18	33954817	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-8.4327
chr5	75473198	75473215	protein_coding	Gsx2	utr3	ENSMUSG00000035946	ProperStrand	307	chr14	33005164	33005238	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-1.2524
chr5	116012552	116013363	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	chr1	173041607	173041649	tRNA	tRNA710-ValCAC	.	504232	ProperStrand	206	1	-7.6841
chr4	71819045	71819135	protein_coding	Tle1	utr3	ENSMUSG00000008305	ProperStrand	16	chr4	131908691	131908771	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-8.7343
chr2	90235315	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr3	88240746	88240763	protein_coding	Sema4a	exon	ENSMUSG00000028064	NonProperStrand	4	1	-10.0500
chr19	7501624	7501653	protein_coding	Rtn3	utr3	ENSMUSG00000024758	ProperStrand	35	chr17	27226288	27226562	protein_coding	Itpr3	exon	ENSMUSG00000042644	ProperStrand	137	1	-12.7455
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr7	88186459	88186475	protein_coding	Zfp592	exon	ENSMUSG00000005621	NonProperStrand	32	1	-7.1521
chr16	37868693	37868783	protein_coding	Lrrc58	exon	ENSMUSG00000034158	ProperStrand	23	chr16	23110494	23110574	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.2122
chr11	14961829	14961849	LINE	Lx	L1	chr11Lx14961726	ProperStrand	93	chrX	84483700	84483730	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-7.3750
chr6	55409137	55409154	protein_coding	Adcyap1r1	intron	ENSMUSG00000029778	NonProperStrand	12	chr9	63119758	63119783	protein_coding	Map2k5	intron	ENSMUSG00000058444	ProperStrand	193	1	-14.2563
chr17	24215620	24215670	protein_coding	Pdpk1	utr3	ENSMUSG00000024122	ProperStrand	18	chr3	68889026	68889126	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-5.5631
chr8	96999676	96999692	lincRNA	Nlrc5	exon	ENSMUSG00000074151	NonProperStrand	25	chr11	88785932	88785979	protein_coding	Scpep1	utr3	ENSMUSG00000000278	ProperStrand	54	1	-15.2939
chr5	33705272	33705362	protein_coding	Maea	intron	ENSMUSG00000079562	ProperStrand	32	chr11	97642956	97643036	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.5978
chr8	87368778	87369774	protein_coding	Calr	exon	ENSMUSG00000003814	ProperStrand	232	chr14	33005038	33005084	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-1.6551
chr16	8663352	8663442	protein_coding	Carhsp1	intron	ENSMUSG00000008393	ProperStrand	15	chr16	35799639	35799729	protein_coding	Hspbap1	intron	ENSMUSG00000022849	NonProperStrand	1	1	-inf
chr16	83676642	83676722	LINE	L1_Mus1	L1	chr16L1_Mus183676009	NonProperStrand	1	chr14	60567452	60567542	protein_coding	Atp8a2	intron	ENSMUSG00000021983	ProperStrand	14	1	-inf
chr6	42628872	42628988	protein_coding	Fam115a	exon	ENSMUSG00000036667	ProperStrand	13	chr10	23506278	23506305	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-10.0461
chr2	119114607	119114623	protein_coding	Vps18	utr5	ENSMUSG00000034216	NonProperStrand	40	chr4	131908715	131908750	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.8200
chr15	79585216	79585232	lincRNA	Gm16576	exon	ENSMUSG00000087543	NonProperStrand	55	chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	1	-11.6097
chr12	111854916	111855006	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr11	116938557	116938637	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-1.8077
chr11	102294588	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr2	130101972	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	7	-12.1250
chr12	77722452	77723131	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	chr19	10630200	10630217	protein_coding	Tmem216	utr5	ENSMUSG00000024667	ProperStrand	27	1	-11.0582
chr3	99003134	99003155	protein_coding	Wars2	intron	ENSMUSG00000004233	NonProperStrand	48	chr16	23111808	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.2671
chr1	162968442	162968494	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	chr2	130101242	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	2	-1.1029
chr4	43505656	43505930	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr12	85350481	85350499	protein_coding	Acot1	utr5	ENSMUSG00000072949	ProperStrand	72	8	-inf
chr11	86847077	86847167	SINE	B1_Mus1	Alu	chr11B1_Mus186847025	ProperStrand	1	chr6	121162719	121162799	protein_coding	Tuba8	intron	ENSMUSG00000030137	NonProperStrand	3	1	-inf
chr17	88604346	88604446	LTR	ORR1A4	MaLR	chr17ORR1A488604265	ProperStrand	1	chr9	15118327	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-inf
chr6	32921653	32921669	protein_coding	Chchd3	intron	ENSMUSG00000053768	ProperStrand	6	chr3	123210929	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-6.4760
chr19	43579408	43579425	protein_coding	Got1	intron	ENSMUSG00000025190	NonProperStrand	147	chr9	64022859	64022905	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-6.2482
chr4	131908689	131908797	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	chr12	110923173	110923222	snoRNA	ENSMUSG00000084487_SNORD113	.	ENSMUSG00000084487	ProperStrand	183	10	-7.5204
chr12	33638594	33638614	lincRNA	4933406C10Rik	exon	ENSMUSG00000086543	ProperStrand	52	chr16	59555214	59555230	protein_coding	Crybg3	utr5	ENSMUSG00000022723	ProperStrand	18	1	-16.0103
chr16	37384897	37384913	protein_coding	Stxbp5l	utr5	ENSMUSG00000022829	ProperStrand	332	chr2	25077734	25077779	protein_coding	Tubb4b	utr3	ENSMUSG00000036752	ProperStrand	58	1	-9.9536
chr2	179992732	179992941	protein_coding	Rps21	exon	ENSMUSG00000039001	ProperStrand	46	chr16	23109032	23109090	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-7.8125
chr13	17896709	17896742	protein_coding	Cdk13	utr5	ENSMUSG00000041297	ProperStrand	29	chr11	116938649	116938749	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-7.6086
chr2	73667860	73667893	protein_coding	Atf2	exon	ENSMUSG00000027104	ProperStrand	37	chr8	126088218	126088300	rRNA	n-R5s115	.	ENSMUSG00000075862	ProperStrand	31	1	-15.6068
chr7	107268310	107268374	protein_coding	Pold3	intron	ENSMUSG00000030726	ProperStrand	14	chr2	26494706	26494800	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.9058
chr17	25520052	25520069	protein_coding	Cacna1h	exon	ENSMUSG00000024112	ProperStrand	30	chrX	34622991	34623037	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-4.4685
chr19	4805165	4805267	protein_coding	Rbm14	intron	ENSMUSG00000006456	ProperStrand	84	chr1	162927588	162927605	protein_coding	Serpinc1	exon	ENSMUSG00000026715	ProperStrand	1	1	-inf
chr11	23263846	23263946	protein_coding	Usp34	exon	ENSMUSG00000056342	ProperStrand	68	chr5	130300499	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.2975
chr16	23110986	23111010	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr4	140277078	140277149	protein_coding	Rcc2	utr3	ENSMUSG00000040945	ProperStrand	228	2	-10.2876
chr6	35136568	35138665	protein_coding	Nup205	exon	ENSMUSG00000038759	ProperStrand	56	chr3	144141680	144141697	protein_coding	Hs2st1	intron	ENSMUSG00000040151	NonProperStrand	31	2	-19.4521
chr11	98857163	98857264	protein_coding	Top2a	exon	ENSMUSG00000020914	NonProperStrand	5	chr16	23111774	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	NonProperStrand	47	2	-inf
chr5	21248621	21248671	protein_coding	Pmpcb	exon	ENSMUSG00000029017	ProperStrand	16	chr5	74489642	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-6.3569
chr15	81782429	81783214	protein_coding	Pmm1	exon	ENSMUSG00000022474	ProperStrand	24	chr16	23111373	23111452	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-4.7906
chr6	13819928	13819993	protein_coding	2610001J05Rik	utr3	ENSMUSG00000052419	ProperStrand	6	chr16	23110856	23110946	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-14.1985
chr13	73935983	73936478	protein_coding	Slc12a7	exon	ENSMUSG00000017756	ProperStrand	80	chr12	60141322	60141402	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-6.2602
chr11	42440243	42440259	protein_coding	Gabrb2	exon	ENSMUSG00000007653	ProperStrand	248	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	2	-9.9089
chr10	74478292	74478341	protein_coding	Gnaz	utr3	ENSMUSG00000040009	ProperStrand	34	chr1	162965975	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-4.6796
chr4	117512090	117512109	processed_transcript	Gm17114	.	ENSMUSG00000091237	ProperStrand	2	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-10.5602
chr6	73221099	73225258	protein_coding	Suclg1	exon	ENSMUSG00000052738	ProperStrand	12	chr16	23110941	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-9.5315
chr19	4037601	4037891	protein_coding	Gstp1	utr5	ENSMUSG00000060803	ProperStrand	9	chr11	69483136	69483229	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	5	-19.8401
chr18	60934337	60936141	protein_coding	Rps14	utr5	ENSMUSG00000024608	ProperStrand	154	chr15	79908954	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-3.6752
chr4	82114659	82114675	protein_coding	Nfib	intron	ENSMUSG00000008575	ProperStrand	50	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.0577
chr9	78327276	78327436	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr4	130160600	130162410	protein_coding	Nkain1	exon	ENSMUSG00000078532	ProperStrand	45	2	-11.1330
chr10	81056886	81056902	protein_coding	Tle6	exon	ENSMUSG00000034758	ProperStrand	10	chr7	116663674	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-5.9268
chr12	112951133	112951151	protein_coding	Bag5	utr5	ENSMUSG00000049792	ProperStrand	3	chr16	23110828	23110894	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-9.5778
chr2	31787386	31787404	protein_coding	Lamc3	intron	ENSMUSG00000026840	NonProperStrand	14	chr9	78327185	78327234	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-9.2710
chr12	85782771	85782861	protein_coding	Aldh6a1	exon	ENSMUSG00000021238	ProperStrand	6	chr9	15119648	15119728	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-7.1405
mmu-miR-709	1	17	miRNA	mmu-miR-709	.	mmu-miR-709	ProperStrand	20	chr17	35299507	35299641	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	4	-20.3353
chr16	17038336	17038365	protein_coding	Mapk1	intron	ENSMUSG00000063358	ProperStrand	67	chr17	35299507	35299561	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	2	-7.5848
mmu-miR-6238	2	20	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr11	69481332	69481475	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-1.9907
chr8	73032388	73032493	protein_coding	Uba52	intron	ENSMUSG00000090137	ProperStrand	37	chr7	116663748	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.3721
chr3	30867852	30867901	protein_coding	Phc3	intron	ENSMUSG00000037652	ProperStrand	32	chr10	23505150	23505235	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-8.3093
chr7	20288679	20296082	protein_coding	Tomm40	exon	ENSMUSG00000002984	ProperStrand	57	chr18	33954901	33954919	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-3.6002
chr17	25261590	25261606	protein_coding	Ptx4	exon	ENSMUSG00000044172	NonProperStrand	30	chr7	116663695	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.7620
chr18	61219834	61220865	protein_coding	Pdgfrb	exon	ENSMUSG00000024620	NonProperStrand	37	chr15	79908929	79908955	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-6.4258
chr10	12902322	12902670	protein_coding	Ltv1	exon	ENSMUSG00000019814	ProperStrand	76	chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	1	-12.0912
chr3	101380455	101380882	protein_coding	Atp1a1	utr3	ENSMUSG00000033161	ProperStrand	316	chr8	110109692	110110539	protein_coding	Psmd7	exon	ENSMUSG00000039067	ProperStrand	36	1	-11.0146
chr8	24042846	24042864	protein_coding	Myst3	exon	ENSMUSG00000031540	ProperStrand	111	chr9	15118519	15118570	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	1	-8.1112
chr1	24621417	24621478	protein_coding	Gm10925	intron	ENSMUSG00000090378	ProperStrand	320	chr19	8800377	8800467	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-0.8807
chrX	125077855	125077872	LINE	Lx5	L1	chrXLx5125076059	ProperStrand	3	chr12	33638595	33638614	lincRNA	4933406C10Rik	exon	ENSMUSG00000086543	ProperStrand	52	1	-inf
chr14	67670709	67670733	protein_coding	Ppp2r2a	intron	ENSMUSG00000022052	ProperStrand	45	chr16	23111372	23111492	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.6772
chr13	9833563	9833625	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr14	63287574	63287615	protein_coding	Serpine3	intron	ENSMUSG00000091155	ProperStrand	210	1	-2.6398
chr9	15119968	15120042	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	chr11	98878376	98878466	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-0.9785
chr1	137281953	137282003	protein_coding	Ipo9	exon	ENSMUSG00000041879	ProperStrand	53	chr9	120038615	120038672	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	3	-8.2318
chr15	89132639	89132751	protein_coding	Sbf1	exon	ENSMUSG00000036529	ProperStrand	85	chr16	23110551	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.8887
chr12	89268504	89268624	protein_coding	Gm8607	intron	ENSMUSG00000092138	NonProperStrand	1	chr1	162966010	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-inf
chr15	98356822	98356912	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	NonProperStrand	1	chr7	29136560	29136650	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	NonProperStrand	27	1	-inf
chr2	174252034	174252321	protein_coding	Th1l	exon	ENSMUSG00000016253	ProperStrand	40	chr2	166890560	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-8.3696
chr15	54403604	54403681	protein_coding	Mal2	intron	ENSMUSG00000024479	ProperStrand	2	chr18	35716747	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-9.2832
chr5	29045399	29045415	lincRNA	9530036O11Rik	exon	ENSMUSG00000086663	NonProperStrand	6	chr9	120037898	120037967	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-9.3918
chr16	20210225	20210274	protein_coding	Yeats2	exon	ENSMUSG00000041215	ProperStrand	21	chr3	123210889	123210979	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-6.6806
chr7	86508288	86508316	protein_coding	Abhd2	utr3	ENSMUSG00000039202	ProperStrand	47	chrX	34622906	34622981	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-3.6184
chr2	90235298	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	70072460	70072477	protein_coding	Myo3b	exon	ENSMUSG00000042064	NonProperStrand	16	1	-7.0757
chr16	34986602	34986618	protein_coding	Mylk	exon	ENSMUSG00000022836	NonProperStrand	56	chr4	141320319	141320336	protein_coding	Dnajc16	intron	ENSMUSG00000040697	ProperStrand	12	1	-16.7620
chr10	42398801	42398908	protein_coding	Ostm1	exon	ENSMUSG00000038280	ProperStrand	14	chr10	23505157	23505204	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-6.3221
chr1	173433177	173433223	protein_coding	B930036N10Rik	utr3	ENSMUSG00000091993	ProperStrand	150	chr14	76247775	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-2.5124
chr9	103256540	103256620	protein_coding	Cdv3	utr3	ENSMUSG00000032803	NonProperStrand	3	chr11	83084996	83085084	snRNA	ENSMUSG00000064856_U2	.	ENSMUSG00000064856	NonProperStrand	2	2	-inf
chr2	104967327	104967343	protein_coding	Wt1	exon	ENSMUSG00000016458	NonProperStrand	338	chr17	46309973	46312102	protein_coding	Polh	exon	ENSMUSG00000023953	ProperStrand	6	3	-inf
chr9	56775853	56775870	protein_coding	Snx33	utr5	ENSMUSG00000032733	NonProperStrand	116	chr5	145555521	145555580	protein_coding	Trrap	exon	ENSMUSG00000045482	ProperStrand	399	2	-13.0601
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr11	69481333	69481429	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	4	-1.3850
chr17	24653477	24653514	protein_coding	Traf7	exon	ENSMUSG00000052752	ProperStrand	28	chr10	23505177	23505267	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.4185
chr7	133520549	133520566	protein_coding	Spns1	exon	ENSMUSG00000030741	NonProperStrand	16	chr1	66741087	66741103	protein_coding	Unc80	exon	ENSMUSG00000055567	NonProperStrand	212	1	-13.4669
chr4	43560642	43560924	protein_coding	Tln1	exon	ENSMUSG00000028465	ProperStrand	101	chr7	116663741	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.6672
chr17	27224576	27225915	protein_coding	Itpr3	exon	ENSMUSG00000042644	ProperStrand	137	chr5	130300516	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.2269
chr11	6428064	6428164	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr4	131866609	131866676	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	6	-4.0461
chr5	88096284	88096300	protein_coding	Csn1s1	exon	ENSMUSG00000070702	NonProperStrand	19	chr14	33005139	33005224	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-6.2373
chr14	27633606	27633686	LINE	L1_Mus4	L1	chr14L1_Mus427632824	ProperStrand	1	chr16	37925432	37925522	protein_coding	Gpr156	intron	ENSMUSG00000046961	NonProperStrand	3	1	-inf
chr4	43526328	43526351	protein_coding	Car9	utr3	ENSMUSG00000028463	NonProperStrand	35	chr16	23111372	23111474	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.0755
chr7	29603479	29603504	protein_coding	Hnrnpl	exon	ENSMUSG00000015165	ProperStrand	150	chr12	119301895	119301912	protein_coding	Dnahc11	intron	ENSMUSG00000018581	ProperStrand	65	1	-11.3135
chr7	87519826	87519916	Simple_repeat	(TC)n	Simple_repeat	chr7(TC)n87519816	ProperStrand	5	chr5	108336937	108337017	protein_coding	Rpl5	utr3	ENSMUSG00000058558	ProperStrand	235	5	-inf
chr17	35643153	35643253	protein_coding	Pou5f1	exon	ENSMUSG00000024406	ProperStrand	104	chr1	165860076	165860092	protein_coding	Scyl3	utr5	ENSMUSG00000026584	NonProperStrand	5	1	-17.4646
chr12	76729941	76729958	LINE	L1MA7	L1	chr12L1MA776729795	NonProperStrand	3	chr11	8368924	8368941	protein_coding	Tns3	intron	ENSMUSG00000020422	NonProperStrand	24	1	-inf
chr8	83224923	83225023	protein_coding	Smarca5	utr3	ENSMUSG00000031715	ProperStrand	115	chr2	130101258	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-5.3145
chr17	57246535	57246551	protein_coding	Tnfsf9	exon	ENSMUSG00000035678	ProperStrand	1	chr4	131865855	131865930	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr4	107596083	107596100	protein_coding	Cpt2	utr5	ENSMUSG00000028607	NonProperStrand	106	chr4	147426075	147426230	protein_coding	Mthfr	exon	ENSMUSG00000029009	ProperStrand	19	1	-14.5076
chr16	13415761	13415834	protein_coding	Mkl2	utr3	ENSMUSG00000009569	ProperStrand	55	chr7	30026273	30026289	protein_coding	Yif1b	intron	ENSMUSG00000030588	ProperStrand	154	2	-18.0114
chrX	101017112	101017128	protein_coding	Slc16a2	exon	ENSMUSG00000033965	ProperStrand	35	chr14	31827503	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-8.0225
chr12	52020746	52020762	LINE	Lx3A	L1	chr12Lx3A52019337	ProperStrand	2	chr2	32542994	32543156	protein_coding	Fpgs	exon	ENSMUSG00000009566	ProperStrand	8	1	-19.9311
chr13	6589366	6589456	protein_coding	Pfkp	intron	ENSMUSG00000021196	ProperStrand	197	chr9	15119646	15119726	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-0.8569
chr4	134926614	134927796	protein_coding	A330049M08Rik	exon	ENSMUSG00000043924	ProperStrand	130	chr16	23111714	23111740	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-0.8303
chr18	10150975	10151034	snRNA	ENSMUSG00000065941_U1	.	ENSMUSG00000065941	ProperStrand	47	chr7	148634702	148634792	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-4.4496
chr8	27268923	27268964	protein_coding	Thap1	exon	ENSMUSG00000037214	ProperStrand	2	chr18	80403700	80403716	protein_coding	Txnl4a	utr5	ENSMUSG00000057130	ProperStrand	44	2	-inf
chr13	93619291	93619367	protein_coding	Mtx3	intron	ENSMUSG00000021704	ProperStrand	3	chr2	26768386	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-11.9253
chr10	62802344	62802360	protein_coding	Sirt1	intron	ENSMUSG00000020063	NonProperStrand	116	chr19	9047001	9047053	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	1	-8.1455
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr3	95462985	95463013	protein_coding	Mcl1	exon	ENSMUSG00000038612	ProperStrand	75	1	-7.5292
chr5	54389949	54389967	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	chr19	8894754	8894772	protein_coding	Hnrnpul2	utr5	ENSMUSG00000071659	ProperStrand	93	1	-9.9017
chr12	83473502	83485664	protein_coding	Sipa1l1	exon	ENSMUSG00000042700	ProperStrand	84	chr11	97642989	97643079	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.9168
chr1	164636209	164636289	protein_coding	Prrc2c	exon	ENSMUSG00000040225	ProperStrand	413	chr2	32818850	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-1.9604
chr2	172836611	172836680	protein_coding	Rae1	intron	ENSMUSG00000027509	ProperStrand	38	chr6	135183307	135183326	protein_coding	8430419L09Rik	exon	ENSMUSG00000030207	ProperStrand	14	1	-17.3558
chr10	5787813	5787830	protein_coding	Gm221	exon	ENSMUSG00000019767	ProperStrand	2	chr7	116664800	116664834	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-9.7350
chr2	146125209	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	chr4	63389602	63389618	protein_coding	Tnfsf15	utr3	ENSMUSG00000050395	NonProperStrand	121	1	-9.6577
chr3	156224612	156224628	lincRNA	4930570G19Rik	exon	ENSMUSG00000085084	ProperStrand	326	chr17	34165326	34165348	protein_coding	Slc39a7	utr3	ENSMUSG00000024327	ProperStrand	39	1	-10.7901
chr16	62910896	62910986	protein_coding	Pros1	intron	ENSMUSG00000022912	ProperStrand	20	chr3	25496522	25496602	protein_coding	Nlgn1	intron	ENSMUSG00000063887	ProperStrand	6	1	-19.1876
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr13	90238585	90238686	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	1	-2.6094
chr2	126647033	126647133	protein_coding	Trpm7	intron	ENSMUSG00000027365	ProperStrand	34	chr9	54245874	54245923	protein_coding	Dmxl2	exon	ENSMUSG00000041268	ProperStrand	18	1	-16.7811
chr2	91613185	91613203	protein_coding	Ambra1	exon	ENSMUSG00000040506	ProperStrand	65	chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	1	-8.4327
chr11	45723144	45723160	protein_coding	Clint1	utr3	ENSMUSG00000006169	NonProperStrand	273	chr10	80642902	80642955	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-3.2165
chr7	105310561	105310577	protein_coding	Capn5	exon	ENSMUSG00000035547	ProperStrand	99	chr11	106362638	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-6.4116
chr2	172765353	172765430	protein_coding	Bmp7	exon	ENSMUSG00000008999	ProperStrand	22	chr17	35299551	35299641	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	3	-15.4612
chr19	6981288	6981330	protein_coding	Prdx5	utr3	ENSMUSG00000024953	ProperStrand	24	chr4	131865485	131865516	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-5.7790
chr6	48410411	48410428	protein_coding	Sspo	exon	ENSMUSG00000029797	NonProperStrand	94	chr9	64736361	64736731	protein_coding	Dennd4a	exon	ENSMUSG00000053641	ProperStrand	537	6	-19.2394
chr4	62978525	62978541	protein_coding	Col27a1	exon	ENSMUSG00000045672	ProperStrand	32	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-4.9294
chr1	63225632	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	chr5	108336363	108336491	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	3	-0.7129
chr11	60974868	60974935	protein_coding	Usp22	exon	ENSMUSG00000042506	ProperStrand	75	chr7	116664084	116665142	protein_coding	Rpl27a	exon	ENSMUSG00000046364	ProperStrand	149	1	-11.0389
chr12	106005330	106005348	protein_coding	Clmn	utr3	ENSMUSG00000021097	NonProperStrand	30	chr4	131908689	131908750	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.2894
chr6	136523825	136530933	protein_coding	Atf7ip	exon	ENSMUSG00000030213	ProperStrand	22	chr7	148634776	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-5.9356
chr1	89673550	89673607	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	chr13	23528223	23528284	tRNA	tRNA103-LysCTT	.	619272	ProperStrand	180	2	-2.7144
chr10	79756571	79756751	protein_coding	Rps15	exon	ENSMUSG00000063457	ProperStrand	119	chr3	68889107	68889187	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-2.0739
chr2	90235313	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr15	88977274	88977290	protein_coding	Mapk11	intron	ENSMUSG00000053137	NonProperStrand	29	1	-5.8800
chr18	77335999	77336061	protein_coding	Pias2	exon	ENSMUSG00000025423	ProperStrand	52	chr11	62416595	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	4	-16.7350
chr19	59335933	59337435	protein_coding	Slc18a2	exon	ENSMUSG00000025094	ProperStrand	11	chr17	24857731	24857821	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-5.4831
chr4	134926614	134927796	protein_coding	A330049M08Rik	exon	ENSMUSG00000043924	ProperStrand	130	chr2	130103767	130103794	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-6.9322
chr3	94681270	94681290	protein_coding	Pogz	exon	ENSMUSG00000038902	ProperStrand	65	chr18	33954816	33954890	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-5.7416
chr12	74204882	74204976	protein_coding	Six4	exon	ENSMUSG00000034460	ProperStrand	33	chr8	32260335	32260370	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-5.7957
chr11	98698836	98698852	protein_coding	Rapgefl1	exon	ENSMUSG00000038020	NonProperStrand	16	chr15	102314602	102314647	protein_coding	Pcbp2	exon	ENSMUSG00000056851	ProperStrand	164	1	-13.9861
chr4	131908688	131908719	lincRNA	Gm17300	intron	ENSMUSG00000091021	ProperStrand	109	chr14	76906371	76906461	protein_coding	Tsc22d1	exon	ENSMUSG00000022010	NonProperStrand	7	2	-inf
chr8	25805793	25807602	protein_coding	Adam3	exon	ENSMUSG00000031553	ProperStrand	7	chr12	17553062	17553091	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-9.4553
chr9	107437338	107437386	protein_coding	Tmem115	exon	ENSMUSG00000010045	ProperStrand	13	chr10	23505152	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-13.0797
chr2	163450504	163450604	protein_coding	Serinc3	utr3	ENSMUSG00000017707	ProperStrand	28	chr11	101304857	101304931	protein_coding	Rpl27	exon	ENSMUSG00000063316	ProperStrand	96	3	-19.3450
chr17	10422810	10422850	protein_coding	Qk	intron	ENSMUSG00000062078	ProperStrand	63	chr2	158185576	158185653	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	2	-10.3461
chr10	41187183	41187273	DNA	URR1B	MER1_type	chr10URR1B41187152	ProperStrand	1	chr10	41187377	41187457	LTR	MTD	MaLR	chr10MTD41187320	NonProperStrand	1	1	-inf
chr12	3306600	3306680	protein_coding	Rab10	intron	ENSMUSG00000020671	ProperStrand	11	chr19	5274341	5274431	protein_coding	Sf3b2	utr3	ENSMUSG00000024853	ProperStrand	102	1	-15.6832
chr3	95058800	95058890	protein_coding	Prune	utr3	ENSMUSG00000015711	ProperStrand	21	chr10	23505198	23505278	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.9252
chr13	64849861	64849877	protein_coding	Cntnap3	exon	ENSMUSG00000033063	NonProperStrand	5	chr4	131865411	131865501	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-9.0535
chr11	116535461	116535534	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr9	120037981	120038081	protein_coding	Rpsa	intron	ENSMUSG00000032518	ProperStrand	398	7	-16.5791
chr1	63626014	63626104	protein_coding	Adam23	intron	ENSMUSG00000025964	ProperStrand	59	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-7.2676
chr2	127056314	127059300	protein_coding	Snrnp200	exon	ENSMUSG00000003660	ProperStrand	203	chr1	162967493	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	6	-9.9423
chr11	69548923	69549028	protein_coding	Polr2a	exon	ENSMUSG00000005198	ProperStrand	200	chr9	64143849	64143873	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-5.3983
chr1	94534354	94534454	protein_coding	Myeov2	intron	ENSMUSG00000073616	ProperStrand	4	chr17	35088957	35088976	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-11.5063
chr11	4667543	4667564	protein_coding	Nf2	utr3	ENSMUSG00000009073	ProperStrand	72	chr8	129468744	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-4.0680
chr11	115935746	115937022	protein_coding	Unc13d	exon	ENSMUSG00000057948	ProperStrand	89	chr11	97643008	97643061	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.8258
chr2	59789991	59790012	protein_coding	Baz2b	intron	ENSMUSG00000026987	ProperStrand	15	chr2	128951606	128951671	protein_coding	Polr1b	exon	ENSMUSG00000027395	ProperStrand	27	1	-17.7183
chr17	25399232	25399275	protein_coding	Ube2i	utr3	ENSMUSG00000015120	ProperStrand	20	chr11	97642952	97643074	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-10.9069
chr9	119708219	119708236	protein_coding	Scn11a	intron	ENSMUSG00000034115	ProperStrand	55	chr11	6428127	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.3504
chr18	35931234	35931324	protein_coding	Ube2d2	utr5	ENSMUSG00000091896	ProperStrand	20	chr2	26768054	26768118	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	3	-18.8717
chr7	148341252	148341332	protein_coding	Ptdss2	exon	ENSMUSG00000025495	ProperStrand	29	chr11	6428077	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-10.9658
chr2	71085921	71085937	protein_coding	Dync1i2	exon	ENSMUSG00000027012	NonProperStrand	58	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-3.3377
chr14	39182648	39182665	protein_coding-noncoding	Nrg3	utr3	ENSMUSG00000041014	NonProperStrand	30	chr5	104865434	104866705	protein_coding	Spp1	exon	ENSMUSG00000029304	ProperStrand	52	1	-15.0025
chr7	138122874	138122964	protein_coding	Htra1	exon	ENSMUSG00000006205	ProperStrand	10	chr2	144087364	144087444	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-10.1870
chr8	125915567	125916862	protein_coding	Tcf25	exon	ENSMUSG00000001472	ProperStrand	66	chr4	131866173	131866263	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-3.4891
chr18	68483613	68483645	protein_coding	Rnmt	utr3	ENSMUSG00000009535	ProperStrand	21	chr14	31827477	31827512	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-9.0569
chr4	118966386	118966847	protein_coding	Ybx1	exon	ENSMUSG00000028639	ProperStrand	171	chr5	123906513	123906613	protein_coding	Mlxip	utr3	ENSMUSG00000038342	ProperStrand	21	1	-13.3374
chr13	55234568	55234584	protein_coding	Zfp346	utr3	ENSMUSG00000021481	ProperStrand	22	chr9	78326769	78326869	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-8.3448
chr11	75283908	75283964	protein_coding	Tlcd2	exon	ENSMUSG00000038217	ProperStrand	23	chr18	33954876	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	4	-16.5949
chr1	88426065	88426104	protein_coding	Ptma	exon	ENSMUSG00000026238	ProperStrand	385	chr6	35165171	35169697	protein_coding	Nup205	exon	ENSMUSG00000038759	ProperStrand	56	1	-9.7285
chr5	74489240	74489330	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr5	115198292	115199319	protein_coding	Git2	exon	ENSMUSG00000041890	ProperStrand	20	1	-7.8145
chr2	172825858	172825875	protein_coding	Rae1	utr5	ENSMUSG00000027509	NonProperStrand	44	chr12	29320338	29320484	protein_coding	Rps7	exon	ENSMUSG00000061477	ProperStrand	129	2	-20.0255
chr19	3883942	3883999	protein_coding	Chka	intron	ENSMUSG00000024843	ProperStrand	17	chr17	35089181	35089234	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	4	-19.6635
chr6	120432385	120432401	protein_coding	Il17ra	exon	ENSMUSG00000002897	ProperStrand	61	chr8	88078807	88078880	protein_coding	Dnaja2	intron	ENSMUSG00000031701	ProperStrand	39	1	-14.1414
chr10	58818112	58818136	protein_coding	P4ha1	exon	ENSMUSG00000019916	ProperStrand	50	chr16	23111452	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.5189
chr9	14601613	14604025	protein_coding	Mre11a	exon	ENSMUSG00000031928	ProperStrand	20	chr18	35716763	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.1514
chr15	37854382	37854399	protein_coding	Rrm2b	utr3	ENSMUSG00000022292	NonProperStrand	3	chr6	125186324	125186402	protein_coding	Vamp1	intron	ENSMUSG00000030337	ProperStrand	8	1	-20.4785
chr8	126185832	126185849	protein_coding	Rhou	utr3	ENSMUSG00000039960	NonProperStrand	3	chr5	110860758	110860858	protein_coding	Fbrsl1	intron	ENSMUSG00000043323	ProperStrand	131	1	-18.0953
chr7	117189909	117190009	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	chr1	162966208	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	17	-11.6052
chr7	4656823	4656840	protein_coding	Brsk1	exon	ENSMUSG00000035390	ProperStrand	12	chr7	16524110	16524139	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	1	-13.0018
chr7	6681591	6681609	protein_coding	Peg3	intron	ENSMUSG00000002265	NonProperStrand	1	chr15	98350182	98350200	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-inf
chr5	115798647	115798878	protein_coding	Cox6a1	exon	ENSMUSG00000041697	ProperStrand	38	chr7	29136581	29136647	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.1665
chr17	56755451	56755598	protein_coding	Lonp1	exon	ENSMUSG00000041168	ProperStrand	83	chr7	112533563	112533579	protein_coding	Fam160a2	exon	ENSMUSG00000044465	ProperStrand	85	1	-11.9604
chr8	108774306	108774329	protein_coding	Prmt7	exon	ENSMUSG00000060098	ProperStrand	43	chr7	117190030	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.9505
chr9	22265627	22265717	protein_coding	Rp9	intron	ENSMUSG00000032239	ProperStrand	7	chr4	131865868	131865948	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.7768
chr19	11271200	11271217	protein_coding	Ms4a13	utr5	ENSMUSG00000057240	ProperStrand	59	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.3068
chr19	5279487	5279587	protein_coding	Sf3b2	exon	ENSMUSG00000024853	ProperStrand	102	chr19	8798743	8798799	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-3.7950
chr14	52914677	52914701	protein_coding	Mettl3	exon	ENSMUSG00000022160	ProperStrand	54	chr3	85448965	85456213	protein_coding	Pet112l	exon	ENSMUSG00000028085	ProperStrand	81	1	-12.9231
chr5	108333581	108333636	snoRNA	ENSMUSG00000064453_Snord21	.	ENSMUSG00000064453	ProperStrand	201	chr3	153573527	153573574	snoRNA	ENSMUSG00000064731_Snord45b	.	ENSMUSG00000064731	ProperStrand	205	3	-19.0440
chr4	137864178	137865302	protein_coding	Ddost	exon	ENSMUSG00000028757	ProperStrand	49	chr11	120693630	120693648	protein_coding	Ccdc57	intron	ENSMUSG00000048445	ProperStrand	12	1	-17.1341
chr3	87531390	87531407	protein_coding	Arhgef11	exon	ENSMUSG00000041977	ProperStrand	16	chr6	71832605	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-8.2591
chr11	69827075	69827140	protein_coding	Acadvl	intron	ENSMUSG00000018574	ProperStrand	19	chr1	162968447	162968511	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-8.3844
chr11	4988084	4991886	protein_coding	Ewsr1	exon	ENSMUSG00000009079	ProperStrand	248	chr7	148634712	148634792	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-1.5497
chr4	127807884	127807901	protein_coding	Csmd2	intron	ENSMUSG00000028804	NonProperStrand	34	chr4	137213238	137213365	protein_coding	Usp48	utr3	ENSMUSG00000043411	ProperStrand	135	1	-12.8314
chr7	29603521	29603732	protein_coding	Hnrnpl	exon	ENSMUSG00000015165	ProperStrand	150	chr17	24857220	24857276	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	7	-inf
chr18	82041463	82041479	LTR	ORR1D2	MaLR	chr18ORR1D282041348	NonProperStrand	1	chr16	23110827	23110893	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr2	118896321	118896421	protein_coding	Casc5	exon	ENSMUSG00000027326	ProperStrand	30	chr8	87426786	87426804	protein_coding	Klf1	exon	ENSMUSG00000054191	NonProperStrand	70	7	-21.8407
chr4	106045354	106046302	protein_coding	Usp24	exon	ENSMUSG00000028514	ProperStrand	74	chr13	23667632	23667662	protein_coding	Hist1h3d	utr5	ENSMUSG00000062808	ProperStrand	7	1	-17.4405
chrX	7752870	7752886	protein_coding	Tbc1d25	exon	ENSMUSG00000039201	ProperStrand	126	chr11	68717904	68717970	protein_coding	Rpl26	exon	ENSMUSG00000060938	ProperStrand	130	1	-10.2714
chr17	36000485	36000501	protein_coding	Nrm	exon	ENSMUSG00000059791	ProperStrand	253	chr1	162966813	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-3.5026
chr11	102069334	102069391	protein_coding	Hdac5	intron	ENSMUSG00000008855	ProperStrand	45	chr14	31827475	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-7.5183
chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	chrX	132806250	132806266	protein_coding	Ngfrap1	utr3	ENSMUSG00000046432	NonProperStrand	7	1	-12.5988
chr19	48457686	48457702	protein_coding	Sorcs3	intron	ENSMUSG00000063434	ProperStrand	16	chr11	6428107	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.7293
chr16	56035887	56035987	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	chrX	34622906	34622930	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	4	-1.8130
chr4	151762060	151762076	protein_coding	Chd5	utr3	ENSMUSG00000005045	NonProperStrand	147	chr9	15119648	15119710	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.2263
chr2	28678124	28678153	protein_coding	Gtf3c4	utr3	ENSMUSG00000035666	ProperStrand	14	chr18	35716816	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	5	-22.4924
chr14	8867211	8867242	protein_coding	Abhd6	intron	ENSMUSG00000025277	NonProperStrand	2	chr17	13112510	13112583	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-11.9614
chr7	120693600	120694598	protein_coding	Far1	exon	ENSMUSG00000030759	ProperStrand	72	chr7	3299118	3299134	protein_coding	Myadm	utr3	ENSMUSG00000068566	NonProperStrand	13	2	-inf
chr13	13603296	13603312	protein_coding	Nid1	utr3	ENSMUSG00000005397	ProperStrand	112	chr7	117189864	117189943	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-4.9906
chr11	48621668	48621970	protein_coding	Trim41	exon	ENSMUSG00000040365	ProperStrand	11	chr10	23505166	23505246	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.1476
chr7	13896657	13896704	protein_coding	Lig1	utr3	ENSMUSG00000056394	ProperStrand	89	chr4	131865936	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-2.3107
chr18	82764043	82764060	protein_coding	Zfp236	utr3	ENSMUSG00000041258	ProperStrand	15	chr2	26494782	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.7664
chr13	23667661	23667713	protein_coding	Hist1h3d	utr5	ENSMUSG00000062808	ProperStrand	7	chr10	23505149	23505254	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-8.5700
chr7	116078310	116081316	protein_coding	Eif3f	exon	ENSMUSG00000031029	ProperStrand	69	chr7	29136625	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.1324
chr7	133939535	133939623	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	1	-3.3017
chr3	20347131	20347211	LINE	L1Md_F2	L1	chr3L1Md_F220346166	NonProperStrand	1	chr11	11527487	11527577	protein_coding	4930512M02Rik	exon	ENSMUSG00000062511	ProperStrand	1	1	-inf
chr16	90950615	90950667	protein_coding	Synj1	exon	ENSMUSG00000022973	ProperStrand	16	chr15	101754849	101754865	protein_coding	Krt4	exon	ENSMUSG00000059668	ProperStrand	45	1	-16.6081
chr10	121242090	121244926	protein_coding	Srgap1	exon	ENSMUSG00000020121	NonProperStrand	80	chr4	155323709	155323809	protein_coding	Ube2j2	intron	ENSMUSG00000023286	ProperStrand	35	1	-13.8280
chr1	164634606	164634696	protein_coding	Prrc2c	exon	ENSMUSG00000040225	ProperStrand	413	chr5	92485115	92485195	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	1	-4.9373
chr15	79362189	79362291	protein_coding	Ddx17	exon	ENSMUSG00000055065	ProperStrand	140	chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-4.2075
chr3	88899542	88899558	protein_coding	Fdps	exon	ENSMUSG00000059743	NonProperStrand	17	chr3	123210907	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-4.3464
chr3	95252379	95256541	protein_coding	Arnt	exon	ENSMUSG00000015522	ProperStrand	18	chr19	39917317	39917333	protein_coding	Cyp2c69	utr3	ENSMUSG00000092008	NonProperStrand	83	1	-15.0921
chr8	13416897	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr8	122149333	122149351	protein_coding	Kcng4	utr3	ENSMUSG00000045246	NonProperStrand	4	2	-18.7545
chr13	10297142	10297158	LTR	MER21B	ERV1	chr13MER21B10296973	ProperStrand	1	chr4	131908300	131908355	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-inf
chr7	135148242	135148260	protein_coding	Trim72	exon	ENSMUSG00000042828	ProperStrand	24	chr5	108334195	108334221	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	2	-10.7418
chr4	40923504	40923535	protein_coding	Nfx1	exon	ENSMUSG00000028423	ProperStrand	39	chr4	131908684	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.8599
chr3	88712255	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	12	-4.2463
chr11	108785035	108785068	protein_coding	Axin2	exon	ENSMUSG00000000142	ProperStrand	23	chr2	26494708	26494747	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	3	-11.7398
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr12	114290175	114290191	protein_coding	Pacs2	intron	ENSMUSG00000021143	NonProperStrand	302	1	-4.6274
chr17	88374686	88379551	protein_coding	Msh6	exon	ENSMUSG00000005370	ProperStrand	150	chr11	6520320	6520410	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	1	-5.9049
chr2	32563527	32563545	protein_coding	Cdk9	exon	ENSMUSG00000009555	NonProperStrand	49	chr11	69483194	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.8009
chr14	56159296	56159313	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	chr2	162356087	162356104	protein_coding	Ptprt	intron	ENSMUSG00000053141	NonProperStrand	46	1	-11.4748
chr18	33248103	33248119	protein_coding	Camk4	intron	ENSMUSG00000038128	NonProperStrand	42	chr11	69481429	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.8588
chr5	121145045	121145093	protein_coding	Dtx1	exon	ENSMUSG00000029603	ProperStrand	10	chr8	125018796	125018812	protein_coding	Gm20388	intron	ENSMUSG00000092329	ProperStrand	295	1	-13.7873
chr11	79997743	80002727	protein_coding	Rnf135	exon	ENSMUSG00000020707	NonProperStrand	18	chr10	23505151	23505215	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.2069
chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	chr9	64143752	64143847	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-2.8544
chr1	152240882	152240946	protein_coding	Tpr	intron	ENSMUSG00000006005	ProperStrand	542	chr5	111121063	111121120	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	4	-8.4535
chr9	57770322	57770339	protein_coding	Ubl7	exon	ENSMUSG00000055720	ProperStrand	9	chr7	26247263	26247353	protein_coding	Ceacam1	utr3	ENSMUSG00000074272	ProperStrand	3	3	-inf
chr7	57865229	57865247	protein_coding	Nell1	intron	ENSMUSG00000055409	ProperStrand	8	chr7	117190015	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-7.3098
chr2	32818188	32819020	protein_coding	Rpl12	exon	ENSMUSG00000038900	ProperStrand	167	chr12	88778644	88778724	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-4.5060
chr7	52714509	52714589	protein_coding	Ftl1	exon	ENSMUSG00000050708	ProperStrand	807	chr4	125181763	125181853	pseudogene	Ftl2	.	ENSMUSG00000082062	ProperStrand	3	1	-14.4824
chr3	103767605	103767664	protein_coding	Rsbn1	utr3	ENSMUSG00000044098	ProperStrand	32	chr17	35088957	35089005	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	2	-11.4640
chr14	25311192	25311281	protein_coding	Rps24	exon	ENSMUSG00000025290	ProperStrand	110	chr18	35716685	35716765	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.2494
chr10	39978310	39978485	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	chr15	79908954	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	5	-0.9801
chr5	34112034	34112050	protein_coding	Letm1	exon	ENSMUSG00000005299	NonProperStrand	145	chr19	36942194	36946172	protein_coding	Tnks2	exon	ENSMUSG00000024811	ProperStrand	133	1	-9.9447
chr1	191509908	191509981	protein_coding	Cenpf	intron	ENSMUSG00000026605	ProperStrand	44	chr3	152450608	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	1	-9.4278
chr11	51850937	51850959	protein_coding	Cdkl3	utr3	ENSMUSG00000020389	ProperStrand	14	chr12	73642907	73642942	protein_coding	1810048J11Rik	exon	ENSMUSG00000034501	ProperStrand	11	1	-20.0608
chr7	54443827	54443904	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	chr7	118219645	118219694	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	3	-3.5937
chr16	4886395	4886411	protein_coding	Mgrn1	exon	ENSMUSG00000022517	NonProperStrand	157	chr3	123210918	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-0.7335
chr7	34994884	34994935	protein_coding-noncoding	Gpi1	utr3	ENSMUSG00000036427	ProperStrand	19	chr3	123210854	123210922	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-6.9819
chr1	108288497	108288564	protein_coding	Phlpp1	intron	ENSMUSG00000044340	ProperStrand	67	chr11	97642977	97643007	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.2853
chr3	15095259	15095349	DNA	Tigger7	MER2_type	chr3Tigger715094962	NonProperStrand	1	chr3	15094649	15094729	LTR	MLT1E2	MaLR	chr3MLT1E215094300	ProperStrand	1	1	-inf
chr10	90076969	90076990	protein_coding	Anks1b	intron	ENSMUSG00000058589	NonProperStrand	230	chr11	98878344	98878371	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-3.7019
chr16	71175066	71175148	snRNA	ENSMUSG00000065931_U6	.	ENSMUSG00000065931	ProperStrand	1	chr17	35089182	35089239	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-inf
chr3	90291011	90291381	protein_coding	Ilf2	exon	ENSMUSG00000001016	ProperStrand	28	chr7	118219574	118219630	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-5.6481
chr14	103470901	103470962	protein_coding	Cln5	exon	ENSMUSG00000022125	ProperStrand	6	chr1	88254774	88255856	protein_coding	Ncl	utr5	ENSMUSG00000026234	ProperStrand	1184	1	-12.1054
chr8	113653194	113653210	protein_coding	Pdpr	intron	ENSMUSG00000033624	ProperStrand	49	chr3	85904466	85904505	snoRNA	ENSMUSG00000065847_SNORA32	.	ENSMUSG00000065847	ProperStrand	40	1	-14.5468
chr8	113362377	113362420	protein_coding	Sf3b3	intron	ENSMUSG00000033732	ProperStrand	181	chr8	113362421	113362488	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	3	-15.9351
chr3	136526736	136526753	protein_coding	Ppp3ca	intron	ENSMUSG00000028161	NonProperStrand	120	chr14	31827474	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-5.5797
chr17	79371783	79371800	protein_coding	Prkd3	exon	ENSMUSG00000024070	NonProperStrand	7	chr4	131908356	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-5.3201
chr12	36747180	36748433	protein_coding	Tspan13	exon	ENSMUSG00000020577	ProperStrand	4	chr16	23110962	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.6489
chr5	116049239	116052395	protein_coding	Gcn1l1	exon	ENSMUSG00000041638	ProperStrand	408	chr1	132614475	132614492	protein_coding	Yod1	intron	ENSMUSG00000046404	ProperStrand	8	1	-13.6092
chr9	17806518	17806598	LTR	RMER15	ERVL	chr9RMER1517806532	NonProperStrand	1	chr9	17806155	17806245	Other	RMER1B	Other	chr9RMER1B17806144	NonProperStrand	1	1	-inf
chr2	180377141	180377158	protein_coding	Tcfl5	exon	ENSMUSG00000038932	NonProperStrand	4	chr7	116663680	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-7.9103
chr19	5800630	5800656	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr15	78982035	78982051	protein_coding	Polr2f	exon	ENSMUSG00000033020	NonProperStrand	71	1	-7.2093
chr5	119211745	119211781	protein_coding	Med13l	intron	ENSMUSG00000018076	ProperStrand	226	chr2	26494708	26494747	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-2.0077
chr14	21204396	21204423	protein_coding	Dnajc9	utr3	ENSMUSG00000021811	ProperStrand	3	chr1	162967505	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-9.6828
chr2	30596414	30596504	LTR	RodERV21-int	ERV1	chr2RodERV21-int30596405	ProperStrand	1	chr7	139706496	139706586	protein_coding	Fgfr2	intron	ENSMUSG00000030849	ProperStrand	100	1	-inf
chr4	57154472	57154489	protein_coding	Epb4.1l4b	intron	ENSMUSG00000028434	NonProperStrand	54	chr15	79908970	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-5.6789
chr10	20080836	20080858	protein_coding	Fam54a	utr3	ENSMUSG00000019992	ProperStrand	232	chr6	115758090	115758133	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-2.9334
chr8	98269984	98270064	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	chr6	70805479	70805569	snoRNA	ENSMUSG00000065750_SNORA5	.	ENSMUSG00000065750	ProperStrand	165	1	-3.6134
chr5	3962235	3962335	protein_coding	Akap9	exon	ENSMUSG00000040407	ProperStrand	28	chr16	23110986	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.1386
chr7	112782969	112782985	protein_coding	Arfip2	utr3	ENSMUSG00000030881	ProperStrand	191	chr13	23830685	23830722	protein_coding	Hist1h1c	utr5	ENSMUSG00000036181	ProperStrand	99	1	-9.9848
chr12	85171200	85171243	protein_coding	Numb	intron	ENSMUSG00000021224	ProperStrand	81	chr7	118219574	118219641	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-6.1217
chr3	108760332	108760349	protein_coding	4921515J06Rik	intron	ENSMUSG00000045662	ProperStrand	1	chr4	131865866	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr5	106886739	106886756	protein_coding	Barhl2	exon	ENSMUSG00000034384	ProperStrand	4	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-11.5063
chr12	60476078	60476094	LTR	LTR16D	ERVL	chr12LTR16D60475969	NonProperStrand	17	chr2	32818833	32818885	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-7.9914
chr13	48974603	48974645	protein_coding	Fam120a	utr3	ENSMUSG00000038014	ProperStrand	76	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-6.7647
chr6	112636586	112636676	protein_coding	Rad18	intron	ENSMUSG00000030254	ProperStrand	38	chr10	90581115	90581195	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	2	-9.3183
chr6	143429775	143429792	LINE	L1MA4	L1	chr6L1MA4143429728	ProperStrand	39	chr2	26493492	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	1	-7.0500
chr13	38598922	38598945	protein_coding	Txndc5	exon	ENSMUSG00000038991	ProperStrand	48	chr17	24857752	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	4	-9.5588
chr10	39978435	39978473	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	chr13	96100661	96100691	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	1	-0.9642
chr19	60847654	60848070	protein_coding	Eif3a	exon	ENSMUSG00000024991	ProperStrand	287	chr16	23110454	23110491	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-0.8902
chr9	78023109	78023149	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr16	15634603	15634659	protein_coding	Mcm4	exon	ENSMUSG00000022673	ProperStrand	51	1	-6.1981
chr15	39673474	39673491	protein_coding	Dpys	exon	ENSMUSG00000022304	ProperStrand	27	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-9.3465
chr10	15498838	15498904	LINE	L1Md_A	L1	chr10L1Md_A15494404	ProperStrand	2	chr4	131865380	131865457	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	2	-inf
chr8	96818793	96818810	protein_coding	Nup93	intron	ENSMUSG00000032939	ProperStrand	43	chr4	131865868	131865922	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.3073
chr1	84745857	84790537	protein_coding	Trip12	exon	ENSMUSG00000026219	ProperStrand	248	chr16	23110470	23110568	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-1.1225
chr15	72638704	72638722	protein_coding	Trappc9	intron	ENSMUSG00000047921	NonProperStrand	53	chr7	116663636	116663726	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-7.1031
chr4	119212352	119212442	protein_coding	Foxj3	utr5	ENSMUSG00000032998	ProperStrand	9	chr16	23110829	23110909	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.9939
chr12	85196467	85217626	protein_coding	Numb	utr5	ENSMUSG00000021224	ProperStrand	81	chr3	36895463	36897119	protein_coding	4932438A13Rik	exon	ENSMUSG00000037270	ProperStrand	96	1	-11.7656
chr17	58091868	58091889	protein_coding	Cntnap5c	intron	ENSMUSG00000038048	NonProperStrand	9	chr9	15118323	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-7.2077
chr8	109185844	109185869	protein_coding	Cdh1	exon	ENSMUSG00000000303	ProperStrand	283	chr15	31165531	31165548	protein_coding	Dap	exon	ENSMUSG00000039168	ProperStrand	6	1	-14.9584
chr17	47027980	47028035	protein_coding	Tbcc	exon	ENSMUSG00000036430	ProperStrand	2	chr11	106362639	106362660	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-14.8626
chr4	129662259	129662276	protein_coding	Bai2	utr5	ENSMUSG00000028782	ProperStrand	119	chr15	82980136	82980192	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	2	-9.4275
chr18	42381151	42381225	protein_coding	Lars	exon	ENSMUSG00000024493	ProperStrand	69	chr18	75161129	75161173	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	2	-13.8793
chr1	45488603	45488620	protein_coding	Col5a2	intron	ENSMUSG00000026042	ProperStrand	184	chr8	13416897	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-4.2803
chr3	113763204	113763221	protein_coding	Col11a1	intron	ENSMUSG00000027966	ProperStrand	7	chr2	180426623	180426660	protein_coding	Dido1	utr5	ENSMUSG00000038914	ProperStrand	81	1	-17.1759
chr6	117795659	117795676	protein_coding	Zfp637	exon	ENSMUSG00000059689	NonProperStrand	53	chr7	148634701	148634800	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-4.2205
chr8	47294580	47294647	protein_coding	Slc25a4	exon	ENSMUSG00000031633	ProperStrand	53	chr7	117189957	117190047	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.5602
chr13	12495480	12495527	protein_coding	Heatr1	exon	ENSMUSG00000050244	ProperStrand	74	chr5	87680856	87680872	protein_coding	Ugt2b37	exon	ENSMUSG00000057425	NonProperStrand	30	1	-14.2965
chr12	112861467	112862728	protein_coding	Mark3	exon	ENSMUSG00000007411	ProperStrand	37	chr19	44188421	44188501	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	4	-18.9349
chr1	157795317	157795394	protein_coding	Cep350	intron	ENSMUSG00000033671	ProperStrand	48	chr9	15118322	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	3	-9.5225
chr7	53435372	53435389	protein_coding	Abcc8	utr5	ENSMUSG00000040136	ProperStrand	15	chr11	58768574	58768593	protein_coding	Hist3h2a	exon	ENSMUSG00000078851	ProperStrand	67	1	-15.9020
chr14	24979482	24979502	protein_coding	Dlg5	exon	ENSMUSG00000021782	ProperStrand	46	chr9	120039540	120039630	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	10	-inf
chr7	108971290	108971306	protein_coding	Inppl1	utr3	ENSMUSG00000032737	ProperStrand	272	chr11	97372833	97372849	protein_coding	Srcin1	utr3	ENSMUSG00000038453	NonProperStrand	21	1	-12.4109
chr2	82097445	82097462	protein_coding	Zfp804a	exon	ENSMUSG00000070866	ProperStrand	2	chr17	13112529	13112579	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-11.9614
chr18	61232949	61232965	protein_coding	Pdgfrb	exon	ENSMUSG00000024620	NonProperStrand	37	chr11	77995180	77995252	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-7.1433
chr5	24005592	24005613	protein_coding	Agap3	exon	ENSMUSG00000023353	ProperStrand	39	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.0833
chr15	99077469	99077485	protein_coding	Mcrs1	exon	ENSMUSG00000037570	NonProperStrand	1	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-inf
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr13	9127627	9127657	protein_coding	Larp4b	intron	ENSMUSG00000033499	ProperStrand	53	1	-7.2745
chr5	110931942	110932022	SINE	B3	B2	chr5B3110931835	NonProperStrand	1	chr5	110932093	110932183	SINE	B3	B2	chr5B3110932074	NonProperStrand	1	1	-inf
chr2	31467193	31467243	protein_coding	Fubp3	exon	ENSMUSG00000026843	ProperStrand	35	chrX	152009278	152009294	protein_coding	Ptchd1	exon	ENSMUSG00000041552	NonProperStrand	294	1	-11.2158
chr1	61440452	61440532	lincRNA	9530026F06Rik	intron	ENSMUSG00000085447	ProperStrand	1	chr2	130698683	130698773	protein_coding	4930402H24Rik	intron	ENSMUSG00000027309	NonProperStrand	12	1	-inf
chr2	23011328	23011344	protein_coding	Mastl	exon	ENSMUSG00000026779	ProperStrand	60	chr4	131908357	131908414	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.4187
chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr6	86475438	86475516	protein_coding	Pcbp1	exon	ENSMUSG00000051695	ProperStrand	108	1	-5.3017
chr4	131890410	131890469	protein_coding	Rcc1	exon	ENSMUSG00000028896	ProperStrand	55	chr7	26102696	26102712	protein_coding	Megf8	exon	ENSMUSG00000045039	ProperStrand	100	1	-12.4625
chr3	104599704	104599889	protein_coding	Mov10	exon	ENSMUSG00000002227	ProperStrand	96	chr4	131865853	131865953	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-2.1425
chr16	64851347	64851369	Simple_repeat	(CCG)n	Simple_repeat	chr16(CCG)n64851329	NonProperStrand	15	chr17	64902740	64902758	protein_coding	AU016765	intron	ENSMUSG00000073377	ProperStrand	9	1	-19.8655
chr5	87354839	87354856	protein_coding	Ugt2b1	exon	ENSMUSG00000035836	ProperStrand	26	chr9	65049532	65049622	snRNA	ENSMUSG00000075930_U5	.	ENSMUSG00000075930	ProperStrand	175	1	-12.8573
chr15	12090400	12091910	protein_coding	Zfr	exon	ENSMUSG00000022201	ProperStrand	48	chr8	129468786	129468876	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-4.8424
chr11	21047998	21048065	protein_coding	Peli1	exon	ENSMUSG00000020134	ProperStrand	69	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-7.8797
chr1	108117442	108117494	protein_coding	Phlpp1	intron	ENSMUSG00000044340	ProperStrand	67	chr1	88252837	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	3	-14.6617
chr1	60623855	60623872	protein_coding	Raph1	intron	ENSMUSG00000026014	NonProperStrand	15	chr12	17746276	17746325	protein_coding	Hpcal1	intron	ENSMUSG00000071379	ProperStrand	51	1	-16.5231
chr1	177829580	177829680	protein_coding	Exo1	exon	ENSMUSG00000039748	ProperStrand	27	chr7	116664794	116664871	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-4.0017
chr17	6138911	6138928	protein_coding	Tulp4	exon	ENSMUSG00000034377	ProperStrand	164	chr15	79908936	79909019	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-3.5594
chr4	149021644	149021734	protein_coding	Clstn1	utr3	ENSMUSG00000039953	ProperStrand	173	chr1	89673608	89673688	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-1.5017
chr5	23825941	23825957	protein_coding	Kcnh2	exon	ENSMUSG00000038319	ProperStrand	242	chr19	8799581	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	2	-6.8050
chr5	101244243	101247601	protein_coding	Fam175a	exon	ENSMUSG00000035234	ProperStrand	6	chr3	123210854	123210883	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-6.4760
chr6	54838512	54838558	protein_coding	Znrf2	utr3	ENSMUSG00000058446	ProperStrand	13	chr7	29136607	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.2243
chr1	51969946	51970021	protein_coding	Myo1b	intron	ENSMUSG00000018417	ProperStrand	31	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.0160
chr10	62478349	62478449	protein_coding	Hnrnph3	utr3	ENSMUSG00000020069	ProperStrand	17	chr16	23111458	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-5.7900
mmu-miR-6238	1	20	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr19	8798740	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-2.2784
chr6	83256503	83256532	protein_coding	Mthfd2	utr3	ENSMUSG00000005667	ProperStrand	6	chr16	23111707	23111758	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-6.2752
chr15	59149499	59152869	protein_coding	Sqle	exon	ENSMUSG00000022351	ProperStrand	19	chr1	158564050	158565218	protein_coding	Abl2	exon	ENSMUSG00000026596	ProperStrand	37	1	-16.6310
chr9	59526717	59526784	protein_coding	Pkm2	utr3	ENSMUSG00000032294	ProperStrand	1296	chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	3	-2.3715
chr8	127059369	127059401	protein_coding	Cog2	exon	ENSMUSG00000031979	ProperStrand	8	chr9	95524998	95525035	snoRNA	ENSMUSG00000065346_SNORA4	.	ENSMUSG00000065346	ProperStrand	142	2	-19.1860
chr19	32135163	32135253	protein_coding	Asah2	intron	ENSMUSG00000024887	ProperStrand	2	chr9	98305252	98305332	protein_coding	Nmnat3	intron	ENSMUSG00000032456	ProperStrand	5	1	-21.6030
chr12	112921177	112921259	protein_coding	Trmt61a	utr3	ENSMUSG00000060950	ProperStrand	23	chr11	116938557	116938635	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	16	-19.9687
chr13	24366042	24366132	protein_coding	Lrrc16a	intron	ENSMUSG00000021338	NonProperStrand	8	chr9	116770669	116770749	protein_coding	Rbms3	intron	ENSMUSG00000039607	NonProperStrand	54	1	-17.5126
chr11	120818412	120819244	protein_coding	Slc16a3	exon	ENSMUSG00000025161	ProperStrand	98	chr17	24665444	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	2	-6.7248
chr11	57874940	57874957	protein_coding	Larp1	utr3	ENSMUSG00000037331	ProperStrand	201	chr19	8800375	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-1.4966
chr11	48617794	48619074	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	chr6	134097815	134097831	protein_coding	Etv6	intron	ENSMUSG00000030199	NonProperStrand	77	1	-9.2966
chr17	88983231	88987033	protein_coding	Klraq1	exon	ENSMUSG00000034709	ProperStrand	6	chr6	97112810	97112879	snoRNA	ENSMUSG00000065728_SNORA36	.	ENSMUSG00000065728	ProperStrand	158	2	-19.0532
chr15	97953587	97953617	protein_coding	Pfkm	exon	ENSMUSG00000033065	ProperStrand	8	chr5	116071701	116071718	protein_coding	Gcn1l1	exon	ENSMUSG00000041638	ProperStrand	408	1	-13.6084
chr19	6373708	6374014	protein_coding	Sf1	exon	ENSMUSG00000024949	ProperStrand	251	chr5	108334196	108334286	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	9	-19.2972
chr18	38062784	38062801	protein_coding	Diap1	exon	ENSMUSG00000024456	ProperStrand	77	chr7	116663689	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.0944
chr2	31652579	31653131	protein_coding	Abl1	exon	ENSMUSG00000026842	ProperStrand	131	chr6	25638699	25638715	protein_coding	Gpr37	exon	ENSMUSG00000039904	ProperStrand	49	1	-12.1545
chr9	15119967	15120042	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	chr18	33954816	33954951	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	7	-1.5952
chr16	44161439	44161485	protein_coding	Naa50	utr3	ENSMUSG00000022698	ProperStrand	56	chr11	69481335	69481434	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.3259
chr11	69481551	69481735	protein_coding	Eif4a1	exon	ENSMUSG00000059796	ProperStrand	108	chr7	117189984	117190060	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.3020
chr7	87883738	87883889	protein_coding	Iqgap1	exon	ENSMUSG00000030536	ProperStrand	43	chr7	29136535	29136625	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-5.1124
chr17	26279588	26279640	protein_coding	Axin1	utr5	ENSMUSG00000024182	ProperStrand	28	chr1	72871119	72871219	protein_coding	Igfbp2	utr5	ENSMUSG00000039323	ProperStrand	406	1	-11.0233
chr5	104499161	104499178	protein_coding	Gm17660	utr3	ENSMUSG00000091034	ProperStrand	1	chr16	23111689	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-inf
chr4	137951171	137951189	protein_coding	Fam43b	exon	ENSMUSG00000078235	ProperStrand	12	chr11	51551280	51551418	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	4	-20.6657
chr4	69927739	69927756	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	NonProperStrand	3	chr7	116663662	116663711	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-8.5982
chr8	128265133	128265223	protein_coding	Ntpcr	intron	ENSMUSG00000031851	ProperStrand	7	chr14	33005156	33005236	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-8.3069
chr11	117005165	117005266	protein_coding	Sec14l1	exon	ENSMUSG00000020823	ProperStrand	71	chr11	77995190	77995238	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-5.8515
chr5	113370707	113370723	protein_coding	Adrbk2	exon	ENSMUSG00000042249	ProperStrand	56	chr19	8963027	8963083	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.3909
chr4	43505657	43505721	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr6	124653292	124653323	protein_coding	Lpcat3	exon	ENSMUSG00000004270	ProperStrand	19	1	-5.2538
chr6	91437842	91437932	protein_coding	Tmem43	utr3	ENSMUSG00000030095	ProperStrand	14	chr1	89681244	89681324	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	2	-13.4079
chr5	37186456	37186500	protein_coding	Mrfap1	utr3	ENSMUSG00000055302	ProperStrand	62	chr10	23505152	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.1888
chr10	8599629	8599709	protein_coding	Sash1	intron	ENSMUSG00000015305	ProperStrand	23	chr18	35714177	35714267	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-5.2752
chr11	120148960	120148976	protein_coding	Bahcc1	exon	ENSMUSG00000039741	NonProperStrand	268	chr9	64022855	64022879	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-5.0787
mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr7	119571525	119571541	protein_coding	Parva	exon	ENSMUSG00000030770	NonProperStrand	5	1	-11.0331
chr3	124750940	124750960	LINE	Lx5	L1	chr3Lx5124750741	ProperStrand	1	chr7	17607808	17607837	protein_coding	Ppp5c	exon	ENSMUSG00000003099	ProperStrand	9	1	-inf
chr10	127525400	127525448	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr1	155287314	155287354	snoRNA	ENSMUSG00000064435_SNORA4	.	ENSMUSG00000064435	ProperStrand	263	2	-9.3496
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	72468685	72468705	protein_coding	Tjp1	intron	ENSMUSG00000030516	ProperStrand	78	1	-3.9658
chr14	21561085	21561214	protein_coding	Camk2g	intron	ENSMUSG00000021820	ProperStrand	24	chr3	125574624	125574640	protein_coding	Ugt8a	exon	ENSMUSG00000032854	ProperStrand	16	1	-17.7988
chr2	130103751	130103825	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	chr2	158182156	158182291	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	4	-4.3501
chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	chr19	8799830	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-1.4138
chr4	134876630	134881067	protein_coding	Srrm1	exon	ENSMUSG00000028809	ProperStrand	142	chr11	68886947	68887007	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	3	-6.7478
chr8	44270747	44272959	protein_coding	Triml2	exon	ENSMUSG00000091490	ProperStrand	32	chr7	29136526	29136553	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-5.9541
chr13	102786946	102786963	LINE	Lx8	L1	chr13Lx8102786451	ProperStrand	6	chr4	138971122	138972500	protein_coding	Ubr4	exon	ENSMUSG00000066036	ProperStrand	304	1	-14.8146
chrX	70962861	70962878	protein_coding	Abcd1	exon	ENSMUSG00000031378	ProperStrand	12	chr4	131908687	131908748	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-6.7788
chr14	56298614	56298714	protein_coding	Tinf2	utr3	ENSMUSG00000007589	ProperStrand	5	chr3	123210911	123210978	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-6.8746
chr7	129303079	129303169	protein_coding	Plk1	exon	ENSMUSG00000030867	ProperStrand	146	chr12	17552950	17553030	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-3.4100
chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	chr5	125316615	125316632	protein_coding	Ccdc92	exon	ENSMUSG00000037979	ProperStrand	45	1	-11.3429
chr1	138523517	138523534	protein_coding	Zfp281	exon	ENSMUSG00000041483	NonProperStrand	1	chr16	23111702	23111754	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-inf
chr3	9425821	9425839	lincRNA	C030034L19Rik	intron	ENSMUSG00000085362	ProperStrand	3	chr16	23110962	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr7	109219780	109219796	protein_coding	Trpc2	utr5	ENSMUSG00000070425	ProperStrand	15	chr5	121655021	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-6.4555
chr6	45494576	45494594	protein_coding	Cntnap2	intron	ENSMUSG00000039419	NonProperStrand	283	chr8	124406968	124407606	protein_coding	Slc7a5	exon	ENSMUSG00000040010	ProperStrand	166	1	-8.1685
chr2	9874374	9874427	protein_coding	Taf3	exon	ENSMUSG00000025782	ProperStrand	62	chr16	23111767	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-3.3854
chr19	42199431	42199447	protein_coding	Avpi1	exon	ENSMUSG00000018821	NonProperStrand	9	chr14	119693352	119693368	protein_coding	Hs6st3	intron	ENSMUSG00000053465	NonProperStrand	134	1	-15.5869
chr15	34370545	34370680	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	chr10	90581034	90581282	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	19	-0.7897
chr2	4829164	4829180	protein_coding	Sephs1	utr3	ENSMUSG00000026662	NonProperStrand	271	chr7	4763078	4763771	protein_coding	Ube2s	exon	ENSMUSG00000060860	ProperStrand	62	1	-10.2251
chr6	94776841	94776875	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	chr13	49779671	49779742	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	3	-7.6078
chr1	145497018	145517178	protein_coding	Cdc73	intron	ENSMUSG00000026361	ProperStrand	22	chr16	23110867	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-6.3713
chr11	90506064	90506081	protein_coding	Cox11	utr3	ENSMUSG00000020544	ProperStrand	1	chr13	117089727	117089744	protein_coding	Isl1	exon	ENSMUSG00000042258	NonProperStrand	17	1	-inf
chr4	10805696	10805786	protein_coding	2610301B20Rik	intron	ENSMUSG00000059482	ProperStrand	3	chr13	67807714	67807794	protein_coding	Zfp71-rs1	utr3	ENSMUSG00000071281	NonProperStrand	7	1	-inf
chr2	127416811	127416901	protein_coding	Mrps5	intron	ENSMUSG00000027374	ProperStrand	84	chr3	123210892	123210972	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-2.8831
chr16	17258503	17258582	protein_coding	Hic2	exon	ENSMUSG00000050240	ProperStrand	36	chr5	130300486	130300554	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.4201
chr8	73115775	73115791	protein_coding	Ell	utr3	ENSMUSG00000070002	NonProperStrand	134	chr11	97641491	97641578	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	1	-6.2636
chr10	115966233	115966327	protein_coding	Cnot2	intron	ENSMUSG00000020166	ProperStrand	12	chr16	32099912	32099929	protein_coding	1500031L02Rik	utr5	ENSMUSG00000035790	NonProperStrand	18	1	-18.4539
chr13	58284572	58284594	protein_coding	Ubqln1	exon	ENSMUSG00000005312	ProperStrand	49	chr16	23110872	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.1188
chr19	7532308	7532324	protein_coding	Rtn3	exon	ENSMUSG00000024758	ProperStrand	35	chr2	160878181	160878238	protein_coding	Chd6	exon	ENSMUSG00000057133	ProperStrand	104	1	-13.3022
chr6	65776387	65776487	protein_coding	Prdm5	intron	ENSMUSG00000029913	ProperStrand	50	chr11	93811259	93811299	protein_coding	Gm20390	exon	ENSMUSG00000091228	ProperStrand	33	1	-14.8865
chr2	29036998	29037058	protein_coding	Setx	utr3	ENSMUSG00000043535	ProperStrand	187	chr1	89673685	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-1.3897
chr11	116399554	116399654	protein_coding	Ube2o	utr3	ENSMUSG00000020802	ProperStrand	134	chr16	23110524	23110577	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.2188
chr17	84687323	84687343	protein_coding	Thada	intron	ENSMUSG00000024251	ProperStrand	47	chr16	23111451	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-3.0053
chr8	108129151	108129169	protein_coding	Fam65a	utr5	ENSMUSG00000038604	NonProperStrand	7	chr18	35714216	35714281	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-7.7147
chr17	24343586	24343602	protein_coding	Ntn3	exon	ENSMUSG00000079662	ProperStrand	237	chr14	76247711	76247840	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-3.2362
chr8	77651228	77651328	protein_coding	Mcm5	utr3	ENSMUSG00000005410	ProperStrand	199	chr1	162967114	162967178	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	1	-6.2985
chr15	71624772	71624796	snoRNA	ENSMUSG00000088895_SNORA81	.	ENSMUSG00000088895	ProperStrand	348	chr17	35088971	35089002	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-2.5814
chr11	74718930	74719010	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	chr18	33954816	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	3	-1.6140
chr3	102775251	102775331	LTR	MERVL_2A-int	ERVL	chr3MERVL_2A-int102774499	NonProperStrand	1	chr3	102775422	102775512	LTR	MERVL_2A-int	ERVL	chr3MERVL_2A-int102775343	NonProperStrand	1	1	-inf
chr7	147325531	147325615	protein_coding	Mtg1	intron	ENSMUSG00000039018	ProperStrand	7	chr10	23505152	23505277	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-8.5700
chr5	73729836	73729852	protein_coding-noncoding	Ociad2	utr3	ENSMUSG00000029153	ProperStrand	1	chr7	54443849	54443949	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	1	-inf
chr1	136195133	136195166	protein_coding	Ppfia4	utr3	ENSMUSG00000026458	ProperStrand	45	chr9	120037902	120037992	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	2	-8.6547
chr2	157119950	157120991	protein_coding	Rpn2	exon	ENSMUSG00000027642	ProperStrand	363	chr4	21606097	21606114	protein_coding	Prdm13	exon	ENSMUSG00000040478	ProperStrand	51	1	-10.0342
chrX	13269163	13269180	protein_coding	Cask	intron	ENSMUSG00000031012	ProperStrand	41	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-10.1361
chr16	37777391	37777408	protein_coding	Fstl1	exon	ENSMUSG00000022816	ProperStrand	179	chr2	72324348	72324392	protein_coding	Cdca7	utr3	ENSMUSG00000055612	ProperStrand	22	1	-13.1538
chr4	133520715	133520737	protein_coding	Hmgn2	utr3	ENSMUSG00000003038	ProperStrand	20	chrX	34622960	34623018	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-5.2611
chr2	90235313	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr14	31953025	31953118	protein_coding	Stab1	exon	ENSMUSG00000042286	NonProperStrand	127	1	-3.0717
chr7	151765212	151765228	antisense	Gm10574	.	ENSMUSG00000073778	ProperStrand	357	mmu-miR-3084-5p	1	17	miRNA	mmu-miR-3084-5p	.	mmu-miR-3084-5p	ProperStrand	1	1	-inf
chr11	56097468	56097548	LINE	L1_Mur3	L1	chr11L1_Mur356097314	NonProperStrand	1	chr11	56096773	56096863	LINE	Lx8	L1	chr11Lx856096626	ProperStrand	1	1	-inf
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr3	157675024	157675127	protein_coding	Srsf11	exon	ENSMUSG00000055436	ProperStrand	46	1	-9.3244
chr4	130320037	130320081	protein_coding	Pum1	exon	ENSMUSG00000028580	ProperStrand	131	chr5	130300531	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-2.4604
chr2	91613185	91613203	protein_coding	Ambra1	exon	ENSMUSG00000040506	ProperStrand	65	chr4	131908689	131908769	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.1169
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr4	106770704	106770721	protein_coding	Cdcp2	intron	ENSMUSG00000047636	NonProperStrand	35	1	-12.4585
chr16	34029899	34029920	protein_coding	Kalrn	intron	ENSMUSG00000061751	NonProperStrand	52	chrX	34622930	34622994	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-5.8595
chr11	69037669	69037685	protein_coding	Gucy2e	exon	ENSMUSG00000020890	NonProperStrand	99	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-6.2427
chr2	172705010	172719024	protein_coding	Bmp7	exon	ENSMUSG00000008999	ProperStrand	22	chr17	24857738	24857818	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-6.9429
chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	4	-3.0658
chr7	17002313	17002701	protein_coding	Zc3h4	exon	ENSMUSG00000059273	ProperStrand	95	chr5	108336415	108336494	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-4.0053
chr6	30699809	30699853	protein_coding	Copg2	exon	ENSMUSG00000025607	ProperStrand	11	chr11	69481341	69481431	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-6.5008
chr18	60686086	60686103	protein_coding	Dctn4	intron	ENSMUSG00000024603	NonProperStrand	6	chr2	26494707	26494800	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	4	-18.9321
chr13	119175902	119175953	protein_coding	Mrps30	exon	ENSMUSG00000021731	ProperStrand	8	chr15	37313435	37313452	protein_coding	Ncald	intron	ENSMUSG00000051359	ProperStrand	28	1	-18.2008
chr1	155287318	155287355	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	chr12	60141337	60141412	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-2.7240
chr1	158611593	158611614	protein_coding	Fam20b	exon	ENSMUSG00000033557	ProperStrand	15	chr7	52715007	52715092	protein_coding	Ftl1	utr5	ENSMUSG00000050708	ProperStrand	807	1	-10.9291
chr5	31379191	31379497	protein_coding	Cad	exon	ENSMUSG00000013629	ProperStrand	260	chr12	60141465	60141502	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-3.9883
chr4	131865403	131865503	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	chr4	116828379	116828438	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	3	-1.4876
chr3	96976854	96976898	protein_coding-noncoding	Acp6	utr5	ENSMUSG00000028093	ProperStrand	3	chr2	34631778	34631830	protein_coding	Hspa5	utr3	ENSMUSG00000026864	ProperStrand	181	2	-inf
chr14	33153227	33153832	protein_coding	Ogdhl	exon	ENSMUSG00000021913	ProperStrand	182	chr16	23110455	23110570	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-1.6928
chr2	119074570	119074634	protein_coding	Spint1	exon	ENSMUSG00000027315	ProperStrand	17	chr1	169393645	169393661	protein_coding	Lrrc52	intron	ENSMUSG00000040485	NonProperStrand	11	1	-19.3848
chr11	62586663	62586690	protein_coding	Zfp286	intron	ENSMUSG00000047342	ProperStrand	1	chr16	23110916	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr11	97185292	97185347	protein_coding	Mrpl45	intron	ENSMUSG00000018882	ProperStrand	12	chr17	24665419	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-8.1632
chr7	125315277	125315357	protein_coding	Smg1	exon	ENSMUSG00000030655	ProperStrand	70	chr1	89673643	89673733	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-2.9859
chr11	48613931	48615230	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	chr19	8799048	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	2	-4.4801
chr9	95525001	95525036	antisense	Gm16126	.	ENSMUSG00000086585	NonProperStrand	229	chr4	131865878	131865978	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-1.1497
chr7	29599009	29607245	protein_coding	Hnrnpl	exon	ENSMUSG00000015165	ProperStrand	150	chr10	23505152	23505243	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-2.9244
chrX	68513818	68513834	protein_coding	Mtm1	utr3	ENSMUSG00000031337	NonProperStrand	10	chr8	72855224	72855280	protein_coding	Gdf1	exon	ENSMUSG00000055694	ProperStrand	2	2	-inf
chr15	76447179	76447269	protein_coding	Slc39a4	utr5	ENSMUSG00000063354	ProperStrand	35	chr4	131908687	131908808	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-3.6928
chr11	116535958	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr16	30379987	30380114	protein_coding	Atp13a3	intron	ENSMUSG00000022533	ProperStrand	45	1	-6.4791
chr18	36961546	36961626	misc_RNA	Vault	.	ENSMUSG00000065145	ProperStrand	177	chr6	35139859	35139949	protein_coding	Nup205	exon	ENSMUSG00000038759	ProperStrand	56	1	-11.2818
chr19	23210162	23210211	lincRNA	2410080I02Rik	exon	ENSMUSG00000044387	NonProperStrand	3	chr19	41306912	41306938	protein_coding	Tm9sf3	exon	ENSMUSG00000025016	ProperStrand	21	2	-21.3783
chr4	127683996	127684014	protein_coding	Csmd2	intron	ENSMUSG00000028804	ProperStrand	19	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-9.5222
chr13	68759738	68764669	protein_coding	Adcy2	exon	ENSMUSG00000021536	ProperStrand	237	chr3	104685565	104685582	protein_coding	St7l	intron	ENSMUSG00000045576	ProperStrand	19	1	-12.8910
chrX	98632591	98632691	protein_coding	Nono	exon	ENSMUSG00000031311	ProperStrand	102	chr11	69483136	69483192	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.5976
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr1	162967512	162967566	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-1.1201
chr1	187091096	187091143	protein_coding	Rab3gap2	exon	ENSMUSG00000039318	ProperStrand	41	chr5	130295444	130295534	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-5.9954
chr12	36219400	36219416	protein_coding	Ahr	utr5	ENSMUSG00000019256	NonProperStrand	64	chr7	119247523	119247576	protein_coding	Usp47	exon	ENSMUSG00000059263	ProperStrand	40	1	-13.9989
chr2	3201661	3222103	protein_coding	Nmt2	exon	ENSMUSG00000026643	ProperStrand	21	chr11	97642952	97643005	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-7.3826
chr16	30362791	30362828	protein_coding	Atp13a3	exon	ENSMUSG00000022533	ProperStrand	45	chr10	23505152	23505220	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-3.0673
chr2	14958501	14958553	protein_coding	Nsun6	utr3	ENSMUSG00000026707	ProperStrand	7	chr16	23110829	23110919	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-6.1472
chr2	127861830	127861848	protein_coding	Acoxl	intron	ENSMUSG00000027380	NonProperStrand	12	chr4	117780294	117807390	protein_coding	St3gal3	utr5	ENSMUSG00000028538	ProperStrand	8	1	-19.1875
chr14	52816796	52816820	protein_coding	Supt16h	exon	ENSMUSG00000035726	ProperStrand	193	chr7	87236495	87236546	protein_coding	Zfp710	utr3	ENSMUSG00000048897	ProperStrand	229	3	-18.6673
chr6	39093228	39093245	protein_coding	Jhdm1d	exon	ENSMUSG00000042599	ProperStrand	14	chr11	6428036	6428089	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.9988
chr3	7757488	7757578	LINE	Lx6	L1	chr3Lx67757299	NonProperStrand	1	chr13	63227436	63227526	protein_coding	2010111I01Rik	intron	ENSMUSG00000021458	ProperStrand	32	1	-inf
chr9	63042015	63042031	protein_coding	Map2k5	exon	ENSMUSG00000058444	ProperStrand	193	chr17	35089228	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-3.2745
chrX	130496426	130496668	protein_coding	Sytl4	exon	ENSMUSG00000031255	ProperStrand	169	chr17	39985500	39985522	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-3.9402
chr10	127521377	127521477	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr5	64666712	64669155	protein_coding	Tbc1d1	exon	ENSMUSG00000029174	ProperStrand	44	1	-9.2896
chr2	90235321	90235346	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	133252344	133252422	protein_coding	Srgap2	intron	ENSMUSG00000026425	ProperStrand	299	2	-3.0426
chr15	75895662	75895720	protein_coding	Scrib	exon	ENSMUSG00000022568	ProperStrand	154	chr1	63225282	63225324	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	3	-15.7234
chr6	54379743	54379760	lincRNA	9130019P16Rik	exon	ENSMUSG00000073067	ProperStrand	255	chrX	84483704	84483751	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-5.3923
chr10	80643816	80643852	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr2	120872244	120872260	protein_coding	Tgm5	exon	ENSMUSG00000053675	NonProperStrand	163	1	-4.1677
chr2	129998665	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chrX	152009278	152009294	protein_coding	Ptchd1	exon	ENSMUSG00000041552	NonProperStrand	294	1	-4.9818
chr18	42370834	42370893	protein_coding	Lars	exon	ENSMUSG00000024493	ProperStrand	69	chr10	23505152	23505237	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.0487
chr8	72705787	72705838	protein_coding	Tmem161a	exon	ENSMUSG00000002342	ProperStrand	42	chr4	131908689	131908755	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-3.2229
chrX	131140794	131140884	protein_coding	Hnrnph2	utr3	ENSMUSG00000045427	ProperStrand	111	chrX	71517822	71517902	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-5.3383
chr11	121189519	121189578	protein_coding	Wdr45l	utr3	ENSMUSG00000025173	ProperStrand	8	chr19	45082742	45082759	protein_coding	Peo1	exon	ENSMUSG00000025209	ProperStrand	8	1	-18.6452
chr10	57236259	57236349	protein_coding	Serinc1	utr3	ENSMUSG00000019877	NonProperStrand	1	chr5	48843500	48843590	protein_coding	Kcnip4	intron	ENSMUSG00000029088	NonProperStrand	11	1	-inf
chr2	32074898	32075132	protein_coding	Prrc2b	exon	ENSMUSG00000039262	ProperStrand	344	chr17	35384176	35384194	snoRNA	ENSMUSG00000065273_SNORD83	.	ENSMUSG00000065273	ProperStrand	244	1	-7.0177
chr7	135048573	135048601	protein_coding	Bckdk	exon	ENSMUSG00000030802	ProperStrand	26	chr11	51551334	51551424	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	1	-9.3827
chr8	41735633	41735650	LTR	RLTR41	ERV1	chr8RLTR4141735492	ProperStrand	4	chr17	46814959	46815235	protein_coding	Klhdc3	exon	ENSMUSG00000063576	ProperStrand	35	1	-inf
chr11	97030470	97030530	protein_coding	Kpnb1	exon	ENSMUSG00000001440	ProperStrand	197	chr10	110933102	110933166	protein_coding	Nap1l1	utr3	ENSMUSG00000058799	ProperStrand	185	1	-8.6736
chr10	110880219	110880299	LINE	L1M3	L1	chr10L1M3110880182	ProperStrand	1	chr10	110880088	110880178	Simple_repeat	(GGAA)n	Simple_repeat	chr10(GGAA)n110880044	NonProperStrand	1	1	-inf
chr3	108229872	108229972	protein_coding	Sars	intron	ENSMUSG00000068739	ProperStrand	45	chr1	162967132	162967178	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	1	-9.2574
chr7	52703317	52703648	protein_coding	Gys1	exon	ENSMUSG00000003865	ProperStrand	28	chr16	23110910	23110990	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.1386
chr4	141178958	141178978	protein_coding	Slc25a34	intron	ENSMUSG00000040740	NonProperStrand	1	chr4	131908810	131908871	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-inf
chrX	98603128	98603153	protein_coding	Zmym3	intron	ENSMUSG00000031310	ProperStrand	17	chr16	23111455	23111503	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.3471
chr2	143780927	143836231	protein_coding	Rrbp1	exon	ENSMUSG00000027422	ProperStrand	76	chr17	24665422	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	2	-7.4623
chr1	94840181	94840281	protein_coding	Capn10	intron	ENSMUSG00000026270	ProperStrand	32	chr4	131908356	131908432	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.4145
chr5	74489203	74489283	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr14	35508122	35508212	protein_coding	Wapal	intron	ENSMUSG00000041408	ProperStrand	93	1	-4.7714
mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr9	15069885	15069901	protein_coding	Med17	exon	ENSMUSG00000031935	ProperStrand	135	1	-4.3353
chr12	105930650	105966628	protein_coding	Dicer1	exon	ENSMUSG00000041415	ProperStrand	61	chr16	23110912	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-1.4221
chr11	80965641	80965658	protein_coding	Accn1	exon	ENSMUSG00000020704	NonProperStrand	228	chr5	108336377	108336410	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-2.4341
chr5	34112034	34112050	protein_coding	Letm1	exon	ENSMUSG00000005299	NonProperStrand	145	chr2	129513331	129513347	protein_coding	Pdyn	utr3	ENSMUSG00000027400	NonProperStrand	3	1	-18.3360
chr7	133940908	133940954	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	chr8	109505194	109515296	protein_coding	Sntb2	exon	ENSMUSG00000041308	ProperStrand	41	4	-inf
chr4	137098804	137099540	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	chr3	85944570	85944608	snoRNA	ENSMUSG00000064390_Rnu73b	.	ENSMUSG00000064390	ProperStrand	164	1	-6.1114
chr10	38922628	38922651	Simple_repeat	(TCTCCC)n	Simple_repeat	chr10(TCTCCC)n38922604	ProperStrand	1	chr11	69483143	69483233	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-inf
chr13	114005857	114005874	protein_coding	Gzmk	intron	ENSMUSG00000042385	ProperStrand	14	chr1	162967489	162967527	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-6.3039
chr18	20733476	20737541	protein_coding	Dsg2	exon	ENSMUSG00000044393	ProperStrand	60	chr1	162966854	162966871	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-6.2589
chr12	12944235	12944251	protein_coding	Mycn	exon	ENSMUSG00000037169	NonProperStrand	109	chr2	145076804	145209255	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-6.5382
chr13	113438173	113438190	protein_coding	Ddx4	intron	ENSMUSG00000021758	ProperStrand	10	chr7	51883912	51883968	protein_coding	Myh14	exon	ENSMUSG00000030739	ProperStrand	29	1	-19.3025
chr5	65952377	65952395	protein_coding	Ube2k	intron	ENSMUSG00000029203	ProperStrand	289	chr17	24665420	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-2.0929
chr7	52378401	52378480	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	7	-10.1588
chr8	124420374	124420435	protein_coding	Slc7a5	exon	ENSMUSG00000040010	ProperStrand	166	chr7	117189980	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-1.6192
chr11	3230998	3231040	lincRNA	Gm12592	exon	ENSMUSG00000053263	ProperStrand	3	chr19	46679318	46679337	protein_coding	D19Wsu162e	intron	ENSMUSG00000047731	NonProperStrand	12	1	-inf
chr11	106645308	106645741	protein_coding	Ddx5	exon	ENSMUSG00000020719	ProperStrand	181	chr11	116938593	116938663	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-4.0287
chr5	136265607	136265966	protein_coding	Mdh2	exon	ENSMUSG00000019179	ProperStrand	50	chr3	123210891	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.3689
chr4	148450153	148473891	protein_coding	Pex14	exon	ENSMUSG00000028975	ProperStrand	16	chr9	15119702	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-12.2225
chrX	83437585	83437630	protein_coding	Nr0b1	exon	ENSMUSG00000025056	ProperStrand	37	chr10	107800732	107800822	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	3	-20.4035
chr9	40611397	40611480	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr12	85196467	85217626	protein_coding	Numb	utr5	ENSMUSG00000021224	ProperStrand	81	1	-7.5401
chr15	6772473	6772496	protein_coding	Osmr	intron	ENSMUSG00000022146	NonProperStrand	6	chr9	64026056	64026103	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	3	-19.6405
chr13	23392049	23392066	lincRNA	4930557F10Rik	intron	ENSMUSG00000085488	NonProperStrand	51	chr6	115757992	115758119	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-5.7905
chr1	134195624	134195640	protein_coding	Klhdc8a	utr5	ENSMUSG00000042115	NonProperStrand	2	chr2	91436228	91436260	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-14.9566
chr5	149863910	149863928	protein_coding	Hmgb1	utr5	ENSMUSG00000066551	NonProperStrand	16	chr16	23110913	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.9771
chr7	29073210	29073330	protein_coding	BC089491	exon	ENSMUSG00000046750	ProperStrand	62	chr9	64022854	64022875	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-7.9598
chr1	151441141	151441231	LINE	Lx4A	L1	chr1Lx4A151441121	NonProperStrand	1	chr1	151440992	151441072	LINE	Lx5	L1	chr1Lx5151440913	ProperStrand	1	1	-inf
chr1	182510691	182512903	protein_coding	Parp1	exon	ENSMUSG00000026496	ProperStrand	227	chr3	88497854	88497934	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-4.8501
chr19	23239772	23239872	protein_coding	Klf9	utr3	ENSMUSG00000033863	ProperStrand	83	chr5	108998806	108998861	protein_coding	Gak	utr3	ENSMUSG00000062234	ProperStrand	33	1	-13.8640
chr7	116674908	116674926	protein_coding	St5	intron	ENSMUSG00000031024	ProperStrand	42	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-11.1474
chr1	89107213	89107229	protein_coding	Chrng	exon	ENSMUSG00000026253	ProperStrand	6	chrX	99382713	99382746	protein_coding	Rps4x	exon	ENSMUSG00000031320	ProperStrand	139	1	-16.2989
chr1	134887807	134887881	protein_coding	Mdm4	utr3	ENSMUSG00000054387	ProperStrand	95	chr18	35102295	35102321	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	5	-19.8976
chr8	36028154	36028244	protein_coding	Tnks	exon	ENSMUSG00000031529	ProperStrand	37	chr1	136504302	136504321	protein_coding	Kdm5b	utr5	ENSMUSG00000042207	ProperStrand	223	1	-11.6561
chr5	77713690	77713744	protein_coding	Rest	utr3	ENSMUSG00000029249	ProperStrand	136	chr18	35714196	35714287	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	3	-5.5460
chr9	115177316	115177335	protein_coding	Stt3b	intron	ENSMUSG00000032437	ProperStrand	66	chr9	29672403	29672419	protein_coding	Ntm	intron	ENSMUSG00000059974	ProperStrand	49	1	-13.5337
chr2	25204090	25204114	protein_coding	Man1b1	exon	ENSMUSG00000036646	ProperStrand	57	chr12	106269283	106269384	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-4.2375
chr11	8418243	8419152	protein_coding	Tns3	exon	ENSMUSG00000020422	ProperStrand	81	chr5	130295408	130295488	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	3	-11.1029
chr8	49213267	49213323	protein_coding	Dctd	intron	ENSMUSG00000031562	ProperStrand	10	chr14	11305541	11305558	protein_coding	Fhit	intron	ENSMUSG00000060579	NonProperStrand	51	1	-17.4450
chrX	11635848	11635865	protein_coding	Bcor	exon	ENSMUSG00000040363	NonProperStrand	293	chr7	52378421	52378481	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	1	-5.3717
chr4	139687242	139687261	protein_coding	Igsf21	intron	ENSMUSG00000040972	NonProperStrand	17	chr19	8800382	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-9.7831
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	12941437	12941454	LTR	MTE2a	MaLR	chr2MTE2a12941159	NonProperStrand	42	1	-5.1514
chr11	68067261	68067277	protein_coding	Ntn1	intron	ENSMUSG00000020902	NonProperStrand	194	chr5	151755616	151755632	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-5.4253
chr9	14304578	14304595	protein_coding	Kdm4d	utr5	ENSMUSG00000053914	ProperStrand	6	chr18	75161532	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-11.9490
chr12	12943841	12943937	protein_coding	Mycn	exon	ENSMUSG00000037169	ProperStrand	24	chr17	13112532	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-6.3779
chr2	151383185	151385200	protein_coding	Fkbp1a	exon	ENSMUSG00000032966	ProperStrand	36	chr12	60774058	60774109	snoRNA	ENSMUSG00000077603_SNORA3	.	ENSMUSG00000077603	ProperStrand	185	1	-12.0856
chr1	134888711	134888801	protein_coding	Mdm4	utr3	ENSMUSG00000054387	ProperStrand	95	chr19	8800361	8800441	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-2.7052
chr13	112540780	112541440	protein_coding	Map3k1	exon	ENSMUSG00000021754	ProperStrand	113	chr6	142447132	142447169	protein_coding	Ldhb	exon	ENSMUSG00000030246	ProperStrand	224	1	-9.4018
chr17	27760193	27760293	protein_coding	Nudt3	utr5	ENSMUSG00000024213	ProperStrand	26	chr1	39605589	39605656	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-9.0249
chr2	118661426	118661455	protein_coding	D2Ertd750e	utr3	ENSMUSG00000027331	ProperStrand	26	chr5	108334198	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-6.4647
chr2	130109497	130109513	protein_coding	Idh3b	exon	ENSMUSG00000027406	ProperStrand	146	chr10	23505603	23505626	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-5.7930
chr10	75940604	75943775	protein_coding	Mcm3ap	exon	ENSMUSG00000001150	NonProperStrand	1	chr15	76346662	76346678	protein_coding	Scrt1	utr3	ENSMUSG00000048385	NonProperStrand	13	1	-inf
chr1	95239265	95239326	protein_coding	Pask	utr5	ENSMUSG00000026274	ProperStrand	20	chr4	75636628	75636645	protein_coding	Ptprd	intron	ENSMUSG00000028399	NonProperStrand	29	1	-16.9994
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr10	120709244	120712786	protein_coding	Tbc1d30	exon	ENSMUSG00000052302	ProperStrand	233	1	-7.7173
chr2	179818081	179818109	protein_coding	Gtpbp5	exon	ENSMUSG00000039069	ProperStrand	4	chr1	162967751	162967806	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	3	-inf
chr7	90953663	90953753	LTR	MLT1A	MaLR	chr7MLT1A90953586	NonProperStrand	1	chr7	90831250	90831330	protein_coding	Il16	intron	ENSMUSG00000001741	ProperStrand	4	1	-inf
chr10	110714319	110714357	protein_coding	Osbpl8	exon	ENSMUSG00000020189	ProperStrand	10	chr11	6428088	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-6.6888
chr11	105344691	105344709	LINE	L1MDa	L1	chr11L1MDa105344134	NonProperStrand	1	chr12	112779147	112779270	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-inf
chr2	167271794	167271884	protein_coding-noncoding	Slc9a8	utr5	ENSMUSG00000039463	NonProperStrand	1	chr2	167271976	167272066	protein_coding	Slc9a8	utr5	ENSMUSG00000039463	NonProperStrand	4	1	-inf
chr9	45203719	45203819	protein_coding	Fxyd6	utr3	ENSMUSG00000066705	ProperStrand	30	chr11	98878344	98878396	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-7.6672
chr11	69163651	69163668	protein_coding	Chd3	exon	ENSMUSG00000018474	NonProperStrand	8	chr10	80641830	80641877	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-10.2056
chr9	111592583	111592601	protein_coding	Stac	exon	ENSMUSG00000032502	ProperStrand	22	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.1855
chr7	75097803	75097819	protein_coding	Igf1r	exon	ENSMUSG00000005533	ProperStrand	121	chr3	88952697	88952713	protein_coding	Hcn3	exon	ENSMUSG00000028051	ProperStrand	40	1	-12.7230
chr5	107721574	107721664	DNA	URR1B	MER1_type	chr5URR1B107721492	ProperStrand	1	chr5	107721695	107721785	SINE	PB1D10	Alu	chr5PB1D10107721670	NonProperStrand	1	1	-inf
chr13	63413494	63413511	protein_coding	2010111I01Rik	intron	ENSMUSG00000021458	ProperStrand	32	chr5	115940323	115940406	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	1	-10.0024
chr4	22655573	22655663	LINE	L1Md_F2	L1	chr4L1Md_F222653435	NonProperStrand	1	chr7	54443274	54443354	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	1	-inf
chr7	16253122	16253202	LINE	L1_Mus1	L1	chr7L1_Mus116251828	ProperStrand	1	chr4	85264171	85264261	protein_coding	Sh3gl2	intron	ENSMUSG00000028488	NonProperStrand	313	1	-inf
chr7	142310663	142310681	protein_coding	Dock1	exon	ENSMUSG00000058325	ProperStrand	22	chr8	73419657	73419726	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-5.0290
chr10	20080837	20080858	protein_coding	Fam54a	utr3	ENSMUSG00000019992	NonProperStrand	1	chr15	34370591	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	NonProperStrand	21	1	-inf
mmu-miR-6240	1	18	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr11	31258350	31258369	protein_coding	Stc2	utr3	ENSMUSG00000020303	ProperStrand	18	1	-8.3164
chr12	115521310	115521401	LTR	RMER13A	ERVK	chr12RMER13A115521199	NonProperStrand	1	chr7	138551988	138552078	protein_coding	Ikzf5	intron	ENSMUSG00000040167	ProperStrand	6	1	-inf
chr13	52742450	52742466	protein_coding	Syk	utr3	ENSMUSG00000021457	NonProperStrand	125	chr19	8799581	8799636	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-5.3252
chr9	65044377	65044467	snRNA	ENSMUSG00000075763_U5	.	ENSMUSG00000075763	ProperStrand	216	chr9	120039534	120039614	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-2.3642
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr14	66209395	66211820	protein_coding	Elp3	exon	ENSMUSG00000022031	ProperStrand	71	1	-7.9793
chr17	24856737	24856753	antisense	Snhg9	.	ENSMUSG00000090101	ProperStrand	218	chr2	26768372	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	3	-7.9682
chr2	90235315	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	75790277	75790293	protein_coding	Ltbp1	utr3	ENSMUSG00000001870	NonProperStrand	66	1	-4.2811
chr4	55544504	55544524	protein_coding	Klf4	exon	ENSMUSG00000003032	ProperStrand	64	chr14	63765441	63765541	protein_coding	Fdft1	utr3	ENSMUSG00000021273	ProperStrand	37	1	-14.1557
chr2	41199972	41199989	protein_coding	Lrp1b	exon	ENSMUSG00000049252	ProperStrand	376	chr3	135102531	135102631	protein_coding	Ube2d3	utr5	ENSMUSG00000078578	ProperStrand	34	1	-10.7825
chr3	88124413	88124468	protein_coding	Cct3	exon	ENSMUSG00000001416	NonProperStrand	1	chr16	20684334	20684387	snoRNA	ENSMUSG00000077239_Snord66	.	ENSMUSG00000077239	NonProperStrand	1	1	-inf
chr4	131399490	131399506	protein_coding	Mecr	exon	ENSMUSG00000028910	NonProperStrand	109	chr4	131908236	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	7	-7.9893
chr11	118063683	118063699	protein_coding	Cyth1	intron	ENSMUSG00000017132	ProperStrand	4	chr4	131865919	131865986	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.0048
chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	chr11	62416951	62416992	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-2.2915
chr4	95681544	95683126	protein_coding	Hook1	exon	ENSMUSG00000028572	ProperStrand	49	chr11	69483136	69483191	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-4.8862
chr19	61302541	61302709	protein_coding	Csf2ra	exon	ENSMUSG00000059326	ProperStrand	17	chr11	121784091	121784108	protein_coding	Gm12588	intron	ENSMUSG00000062632	ProperStrand	9	1	-19.7748
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	38049667	38049683	LTR	MLT1A0	MaLR	chr8MLT1A038049422	NonProperStrand	91	2	-6.2263
chr2	32563527	32563545	protein_coding	Cdk9	exon	ENSMUSG00000009555	NonProperStrand	49	chr14	77424372	77424388	protein_coding	9030625A04Rik	utr3	ENSMUSG00000044350	NonProperStrand	152	1	-11.8567
chr1	16509386	16509410	protein_coding	Stau2	utr5	ENSMUSG00000025920	ProperStrand	7	chr17	13112468	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-8.9252
chr11	120576837	120577126	protein_coding	Lrrc45	exon	ENSMUSG00000025145	ProperStrand	3	chr4	131865385	131865460	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-10.2531
chr19	47970971	47970987	protein_coding	Itprip	utr3	ENSMUSG00000079254	ProperStrand	75	chr9	120039623	120039649	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.9174
chr19	3904233	3904250	protein_coding	Tcirg1	exon	ENSMUSG00000001750	ProperStrand	77	chr12	111791001	111791065	protein_coding	Ppp2r5c	exon	ENSMUSG00000017843	ProperStrand	36	1	-13.8406
chr11	8894343	8894406	protein_coding	Hus1	utr3	ENSMUSG00000020413	ProperStrand	16	chr16	23110552	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-8.2002
chr17	88384284	88384324	protein_coding	Msh6	exon	ENSMUSG00000005370	ProperStrand	150	chr11	77996571	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	2	-7.1967
chr14	121343727	121343756	protein_coding	Ipo5	exon	ENSMUSG00000030662	ProperStrand	135	chr15	34370545	34370598	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-2.1295
chr14	22650846	22650862	protein_coding	Vdac2	utr5	ENSMUSG00000021771	ProperStrand	18	chr4	56910496	56910563	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-8.5231
chr11	116535464	116535523	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr1	66521957	66521973	protein_coding	Unc80	intron	ENSMUSG00000055567	NonProperStrand	212	1	-3.5008
chr13	34255143	34255161	protein_coding	Psmg4	intron	ENSMUSG00000071451	ProperStrand	5	chr9	120039533	120039553	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-8.3145
chr9	120483248	120483279	protein_coding	Rpl14	exon	ENSMUSG00000025794	ProperStrand	123	chr9	15118334	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-3.9420
chr9	26880469	26880495	protein_coding	Ncapd3	intron	ENSMUSG00000035024	ProperStrand	16	chr16	23111445	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-8.8328
chr17	67712818	67712835	LTR	ORR1E	MaLR	chr17ORR1E67712788	ProperStrand	39	chr17	81092004	81092038	protein_coding	Map4k3	intron	ENSMUSG00000024242	ProperStrand	7	1	-18.3420
chr5	77777261	77777361	protein_coding	Polr2b	exon	ENSMUSG00000029250	ProperStrand	68	chr11	93813311	93814140	protein_coding	Gm20390	exon	ENSMUSG00000091228	ProperStrand	33	1	-14.2606
chr17	39985543	39985724	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr11	48616681	48616708	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	2	-4.0175
chr10	79225422	79229569	protein_coding	Rnf126	exon	ENSMUSG00000035890	ProperStrand	30	chr18	35716702	35716761	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.3863
chr3	87666151	87666178	protein_coding	Prcc	exon	ENSMUSG00000004895	ProperStrand	38	chr13	96100557	96100609	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	1	-8.9853
chr19	8798483	8798553	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	chr9	15118245	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	35	-11.1206
chr18	58038974	58039034	protein_coding	Slc12a2	exon	ENSMUSG00000024597	ProperStrand	20	chrX	103398209	103398612	protein_coding	Pgk1	exon	ENSMUSG00000062070	ProperStrand	484	1	-11.3584
chr18	36933173	36933263	protein_coding	Hars	exon	ENSMUSG00000001380	ProperStrand	23	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-10.5302
chr13	51251743	51251767	LTR	ORR1D2-int	MaLR	chr13ORR1D2-int51251567	NonProperStrand	1	chr9	78327712	78327813	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-inf
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr4	133084114	133084130	protein_coding	Gm17688	exon	ENSMUSG00000090282	ProperStrand	5	1	-12.3850
chr18	40937407	40937424	LTR	RMER20A	ERVK	chr18RMER20A40936942	ProperStrand	2	chr2	77678936	77678957	lincRNA	Gm13661	intron	ENSMUSG00000087102	ProperStrand	1	1	-inf
chr8	64017614	64028378	protein_coding	Palld	exon	ENSMUSG00000058056	NonProperStrand	125	chr4	131908236	131908344	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-1.1647
chr7	34993333	34993433	protein_coding-noncoding	Gpi1	utr3	ENSMUSG00000036427	ProperStrand	19	chr17	35087894	35087959	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-7.4875
chr16	34986602	34986618	protein_coding	Mylk	exon	ENSMUSG00000022836	NonProperStrand	56	chr4	56793994	56794051	protein_coding	Ikbkap	exon	ENSMUSG00000028431	ProperStrand	44	1	-14.0790
chr16	44091370	44098878	protein_coding	Atp6v1a	exon	ENSMUSG00000052459	ProperStrand	79	chrX	34622906	34623019	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	5	-12.2258
chr6	13820663	13820680	protein_coding	2610001J05Rik	exon	ENSMUSG00000052419	NonProperStrand	13	chr7	117190016	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-6.3017
chr11	29446303	29446346	protein_coding	Rps27a	exon	ENSMUSG00000020460	ProperStrand	47	chr18	35716832	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.5824
chr8	113366286	113366332	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	chr16	23109050	23109093	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	4	-11.1042
chr6	82956384	82956411	protein_coding	D6Mm5e	exon	ENSMUSG00000030041	ProperStrand	17	chr3	123210854	123210908	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-7.3207
chr9	57017613	57017693	LTR	MTC	MaLR	chr9MTC57017389	ProperStrand	1	chr9	57017127	57017217	LTR	ORR1B1	MaLR	chr9ORR1B157016966	ProperStrand	1	1	-inf
chr2	129998643	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr4	131865391	131865516	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	4	-1.9046
chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr2	166890504	166890580	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	9	-2.9827
chr8	11221331	11221347	protein_coding	Col4a1	exon	ENSMUSG00000031502	ProperStrand	64	chr1	162965979	162966041	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-3.4843
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr18	75160711	75160777	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	1	-1.0182
chr7	128792692	128792782	protein_coding	Usp31	exon	ENSMUSG00000063317	ProperStrand	35	chr4	131908814	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	11	-22.0178
chr8	127993731	127993748	protein_coding	Sipa1l2	exon	ENSMUSG00000001995	NonProperStrand	8	chr10	41644311	41644329	protein_coding	Armc2	exon	ENSMUSG00000071324	ProperStrand	281	1	-14.3570
chr4	109014128	109014153	protein_coding	Eps15	intron	ENSMUSG00000028552	ProperStrand	15	chr4	123170494	123171189	protein_coding	Macf1	exon	ENSMUSG00000028649	ProperStrand	320	1	-12.7779
chr14	51396909	51396999	protein_coding	Ttc5	intron	ENSMUSG00000006288	ProperStrand	9	chr18	35716727	35716807	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-9.5374
chrX	19683228	19683244	protein_coding	Slc9a7	exon	ENSMUSG00000037341	NonProperStrand	136	chr1	39605591	39605653	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-5.7286
chr13	63612936	63612952	protein_coding	Ptch1	exon	ENSMUSG00000021466	NonProperStrand	118	chr16	91630367	91630429	protein_coding	Gart	exon	ENSMUSG00000022962	ProperStrand	200	1	-9.5414
chr19	42506184	42506266	protein_coding	Crtac1	utr5	ENSMUSG00000042401	ProperStrand	26	chr15	5068464	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-7.7355
chr11	100414998	100415014	protein_coding	Ttc25	exon	ENSMUSG00000006784	NonProperStrand	119	chr18	74938044	74938128	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	ProperStrand	1022	1	-6.2909
chr5	63039600	63039690	protein_coding	Arap2	intron	ENSMUSG00000037999	ProperStrand	4	chr5	64356290	64356370	protein_coding	Rell1	intron	ENSMUSG00000047881	NonProperStrand	4	1	-inf
chr5	121654975	121658794	protein_coding	Rpl6	exon	ENSMUSG00000029614	ProperStrand	332	chr7	116663634	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-1.3248
chr2	119411145	119411173	protein_coding	1500003O03Rik	utr3	ENSMUSG00000014077	ProperStrand	22	chr10	23505152	23505235	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-7.4556
chr8	46334013	46334106	protein_coding	F11	exon	ENSMUSG00000031645	ProperStrand	21	chr1	162965981	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-9.2431
chr10	50094510	50094600	LINE	L1Md_F2	L1	chr10L1Md_F250094482	ProperStrand	1	chr10	50094368	50094448	LINE	L1_Mus3	L1	chr10L1_Mus350094040	ProperStrand	1	1	-inf
chr12	36883267	36883360	protein_coding	Bzw2	utr5	ENSMUSG00000020547	ProperStrand	29	chr19	57685816	57685834	protein_coding	Atrnl1	utr5	ENSMUSG00000054843	NonProperStrand	11	2	-20.0880
chr18	67984345	68002882	protein_coding	Cep192	exon	ENSMUSG00000024542	ProperStrand	59	chr4	131908686	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	8	-13.7100
chr18	35064262	35064310	protein_coding	Etf1	utr3	ENSMUSG00000024360	ProperStrand	74	chr17	24856659	24856749	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-6.0135
chr3	88715213	88715230	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr10	23506278	23506347	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-1.4147
chr17	12256599	12256679	SINE	B3A	B2	chr17B3A12256560	ProperStrand	1	chr17	12256871	12256961	SINE	B4A	B4	chr17B4A12256882	ProperStrand	1	1	-inf
chr10	41249875	41249894	protein_coding	Cd164	utr3	ENSMUSG00000019818	ProperStrand	38	chr4	131908689	131908789	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-5.3463
chr3	89009743	89009759	protein_coding	Gba	exon	ENSMUSG00000028048	NonProperStrand	88	chr16	23111384	23111418	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.7796
chr5	24805443	24805754	protein_coding	Mll3	exon	ENSMUSG00000038056	ProperStrand	31	chr4	131908236	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-4.3850
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chrX	130939423	130939473	protein_coding	Drp2	utr5	ENSMUSG00000000223	ProperStrand	9	1	-8.7793
chr1	72301656	72301736	snRNA	ENSMUSG00000093333_AC120136.3	.	ENSMUSG00000093333	ProperStrand	68	chr3	88497891	88497981	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-7.2107
chr2	72808765	72808783	protein_coding	Sp3	exon	ENSMUSG00000027109	ProperStrand	11	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	2	-16.6577
chr7	52401142	52401376	protein_coding	Aldh16a1	exon	ENSMUSG00000007833	ProperStrand	27	chr1	59761677	59761714	snoRNA	ENSMUSG00000089093_Snord11	.	ENSMUSG00000089093	ProperStrand	193	1	-12.5856
chr13	23838716	23838758	protein_coding	Hist1h2bb	exon	ENSMUSG00000075031	ProperStrand	27	chr7	116663649	116663710	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.9611
chr16	11144177	11144403	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr7	29136550	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	NonProperStrand	27	3	-19.3971
chr18	24050336	24050354	protein_coding	Mapre2	utr3	ENSMUSG00000024277	NonProperStrand	7	chr4	131908236	131908315	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-5.3201
chr7	52133013	52133113	DNA	Charlie8	MER1_type	chr7Charlie852133001	ProperStrand	2	chr17	24857784	24857851	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-9.4368
chr12	94078915	94079005	LINE	L1Md_F2	L1	chr12L1Md_F294076886	NonProperStrand	1	chrX	74585026	74585116	LINE	L1Md_A	L1	chrXL1Md_A74580852	NonProperStrand	1	1	-inf
chr7	133592210	133592226	protein_coding	Atp2a1	exon	ENSMUSG00000030730	ProperStrand	49	chr5	121655052	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.1280
chr15	103043658	103070216	protein_coding	Cbx5	utr5	ENSMUSG00000009575	ProperStrand	98	chr7	140928922	140929012	protein_coding	Dhx32	exon	ENSMUSG00000030986	ProperStrand	100	2	-17.7928
chr5	111812088	111812105	protein_coding	Pitpnb	exon	ENSMUSG00000050017	ProperStrand	137	chr5	115939520	115939584	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-6.2286
chr13	52742450	52742466	protein_coding	Syk	utr3	ENSMUSG00000021457	NonProperStrand	125	chr15	99433433	99433451	protein_coding	Aqp6	exon	ENSMUSG00000043144	NonProperStrand	45	1	-12.4196
chr9	57435425	57435441	protein_coding	Scamp2	utr3	ENSMUSG00000040188	NonProperStrand	16	chr16	23110455	23110515	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.9207
chr10	105278600	105278616	protein_coding	Ccdc59	exon	ENSMUSG00000019897	ProperStrand	21	chr4	154449059	154449081	protein_coding	Rer1	exon	ENSMUSG00000029048	ProperStrand	9	1	-18.7840
chr11	75321855	75322026	protein_coding	Prpf8	utr3	ENSMUSG00000020850	ProperStrand	255	chr11	5180669	5180685	protein_coding	Znrf3	utr3	ENSMUSG00000041961	NonProperStrand	210	1	-7.9080
chr11	115626804	115626826	protein_coding	2310067B10Rik	utr5	ENSMUSG00000020747	ProperStrand	74	chr3	123210916	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.7343
chr7	13516164	13516208	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	NonProperStrand	4	chrX	135059165	135059183	protein_coding	Il1rapl2	intron	ENSMUSG00000059203	NonProperStrand	23	1	-18.9843
chr9	111102243	111102312	protein_coding	Lrrfip2	exon	ENSMUSG00000032497	ProperStrand	28	chr8	113362430	113362468	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	3	-18.8207
chr1	179123164	179123229	protein_coding	Akt3	intron	ENSMUSG00000019699	ProperStrand	12	chr9	15118563	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	1	-12.6243
chr6	29373691	29373781	protein_coding	Ccdc136	intron	ENSMUSG00000029769	ProperStrand	19	chr10	23505156	23505236	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-5.4097
chr4	134877207	134877307	protein_coding	Srrm1	utr3	ENSMUSG00000028809	ProperStrand	142	chr1	63225653	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-4.9821
chr5	77738902	77738918	protein_coding	Noa1	exon	ENSMUSG00000036285	ProperStrand	147	chr5	130300419	130300478	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.1330
chr18	12297912	12297929	protein_coding	Riok3	exon	ENSMUSG00000024404	NonProperStrand	9	chr4	137213077	137213129	protein_coding	Usp48	utr3	ENSMUSG00000043411	ProperStrand	135	1	-15.5738
chr10	75399063	75399153	protein_coding	Chchd10	exon	ENSMUSG00000049422	ProperStrand	140	chr17	35087894	35087940	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-3.5920
chr13	92120825	92120915	protein_coding	Rasgrf2	intron	ENSMUSG00000021708	NonProperStrand	6	chr13	92023643	92023733	protein_coding	Rasgrf2	utr3	ENSMUSG00000021708	ProperStrand	3	1	-inf
chr8	88402142	88403621	protein_coding	Phkb	exon	ENSMUSG00000036879	ProperStrand	25	chr9	15119968	15120017	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-9.0132
chr7	16896053	16896143	protein_coding	Bbc3	intron	ENSMUSG00000002083	ProperStrand	9	chr11	97643010	97643090	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-6.0986
chr19	3884761	3884833	protein_coding	Chka	intron	ENSMUSG00000024843	ProperStrand	17	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.6910
chr11	115128414	115128431	protein_coding	Grin2c	utr5	ENSMUSG00000020734	ProperStrand	12	chr16	23111389	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-13.6410
chr11	68264313	68264333	protein_coding	Pik3r5	intron	ENSMUSG00000020901	ProperStrand	8	chr4	131908687	131908783	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	7	-19.3743
chr8	107824427	107824500	protein_coding	E2f4	exon	ENSMUSG00000014859	ProperStrand	32	chr4	131908236	131908272	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.4145
chr13	99083697	99086203	protein_coding	Btf3	exon	ENSMUSG00000021660	ProperStrand	64	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-7.5986
chr1	17736815	17736831	protein_coding	Crispld1	exon	ENSMUSG00000025776	NonProperStrand	6	chr12	88778628	88778722	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-11.2344
chr2	157942451	157942490	protein_coding	Tgm2	utr3	ENSMUSG00000037820	ProperStrand	44	chr5	130300460	130300493	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	7	-inf
chr10	8532624	8532641	protein_coding	Sash1	intron	ENSMUSG00000015305	NonProperStrand	14	chr11	68922008	68922593	protein_coding	Per1	exon	ENSMUSG00000020893	ProperStrand	46	1	-16.8874
chr2	89368462	89368479	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	chr9	15119378	15119425	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	4	-8.6783
chr8	118942580	118942597	LTR	MLT1D	MaLR	chr8MLT1D118942283	ProperStrand	18	chr9	15118323	15118349	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-5.7882
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr10	128241348	128241374	protein_coding	Tmem198b	utr5	ENSMUSG00000047090	ProperStrand	2	1	-14.4898
chr6	142446989	142447041	protein_coding	Ldhb	intron	ENSMUSG00000030246	ProperStrand	224	chr2	166890561	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-4.9701
chr11	120681851	120681951	protein_coding	Fasn	exon	ENSMUSG00000025153	ProperStrand	298	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-1.0083
chr1	136699686	136699702	protein_coding-noncoding	Ppp1r12b	utr3	ENSMUSG00000073557	NonProperStrand	8	chr1	162967783	162967806	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	1	-14.3900
chr18	23467978	23468002	SINE	MIRc	MIR	chr18MIRc23467888	ProperStrand	1	chr18	33954816	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-inf
chr6	93765818	93862891	protein_coding	Magi1	intron	ENSMUSG00000045095	NonProperStrand	47	chr7	117189863	117189973	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.7835
chr11	75116171	75119624	protein_coding	Rpa1	exon	ENSMUSG00000000751	ProperStrand	37	chr10	80641728	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	1	-8.5172
chr11	68629451	68629526	protein_coding	Myh10	utr3	ENSMUSG00000020900	ProperStrand	91	chrX	71517842	71517932	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-5.7255
chr2	90235296	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	6232006	6232022	protein_coding	Tulp4	exon	ENSMUSG00000034377	NonProperStrand	265	4	-7.1009
chr1	78421791	78421844	protein_coding	Farsb	exon	ENSMUSG00000026245	ProperStrand	40	chr1	162965531	162965565	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-9.8443
chr6	92151569	92151609	protein_coding	Zfyve20	exon	ENSMUSG00000014550	ProperStrand	26	chr16	23111394	23111505	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	5	-12.2104
chr4	137074856	137074929	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	chr13	21845992	21846023	protein_coding	Hist1h2bn	exon	ENSMUSG00000069271	ProperStrand	5	3	-inf
chr1	55138591	55138618	protein_coding	Hspd1	exon	ENSMUSG00000025980	ProperStrand	140	chr18	35714162	35714262	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-1.9771
chrX	71517011	71517044	protein_coding	Rpl10	exon	ENSMUSG00000008682	ProperStrand	71	chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	1	-8.7274
chr10	79316213	79316230	lincRNA	E130317F20Rik	exon	ENSMUSG00000091994	NonProperStrand	97	chr11	6428088	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-4.1715
chr16	63865917	63865934	SINE	ID_B1	B4	chr16ID_B163865836	ProperStrand	1	chr6	72388906	72388923	protein_coding	Mat2a	intron	ENSMUSG00000053907	ProperStrand	51	1	-inf
chr19	25016725	25016793	snoRNA	ENSMUSG00000064896_SNORA19	.	ENSMUSG00000064896	ProperStrand	88	chr18	35716806	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-2.9226
chr3	97542810	97542887	protein_coding	Pde4dip	utr3	ENSMUSG00000038170	ProperStrand	25	chr17	24857804	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-6.5618
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chrX	70962862	70962878	protein_coding	Abcd1	exon	ENSMUSG00000031378	ProperStrand	12	1	-10.2938
chr13	76193665	76193681	protein_coding	Gpr150	exon	ENSMUSG00000045509	NonProperStrand	63	chr12	110918155	110918221	snoRNA	ENSMUSG00000065749_AF357428	.	ENSMUSG00000065749	ProperStrand	218	1	-10.6279
chr8	60126450	60126467	protein_coding	Galnt7	intron	ENSMUSG00000031608	ProperStrand	12	chr2	32818835	32818886	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-8.7091
chr4	32739778	32739812	protein_coding	Casp8ap2	utr3	ENSMUSG00000028282	ProperStrand	7	chr11	69483195	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-6.6014
chr2	24825186	24827046	protein_coding	Wdr85	exon	ENSMUSG00000026975	ProperStrand	323	chr2	119767368	119767431	protein_coding	Mga	exon	ENSMUSG00000033943	ProperStrand	180	1	-7.7450
chr18	33012290	33012551	protein_coding	Wdr36	exon	ENSMUSG00000038299	ProperStrand	28	chr2	32818840	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-6.9808
chr9	119714820	119714837	protein_coding	Scn11a	exon	ENSMUSG00000034115	NonProperStrand	4	chr7	116663633	116663708	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-7.9103
chr11	109096583	109096663	protein_coding	Rgs9	utr3	ENSMUSG00000020599	ProperStrand	18	chr19	8800371	8800461	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-9.6041
chr14	56506398	56506415	protein_coding	Khnyn	exon	ENSMUSG00000047153	NonProperStrand	2	chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-13.2734
chr1	178765257	178765273	protein_coding	Sdccag8	intron	ENSMUSG00000026504	NonProperStrand	2	chr19	8800355	8800407	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-10.8391
chr12	87847346	87855241	protein_coding	Esrrb	exon	ENSMUSG00000021255	NonProperStrand	14	chr10	36501622	36501641	protein_coding	Hs3st5	intron	ENSMUSG00000044499	NonProperStrand	6	1	-20.8732
chr11	102060333	102060701	protein_coding	Hdac5	exon	ENSMUSG00000008855	ProperStrand	45	chr4	46642576	46642636	protein_coding	Tbc1d2	intron	ENSMUSG00000039813	ProperStrand	12	1	-17.2463
chr2	36093557	36093574	protein_coding	Ptgs1	exon	ENSMUSG00000047250	NonProperStrand	5	chr3	123210885	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-6.8746
chr13	55217850	55217940	protein_coding	Zfp346	intron	ENSMUSG00000021481	ProperStrand	22	chr11	69481337	69481417	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-8.4506
chr2	4829164	4829180	protein_coding	Sephs1	utr3	ENSMUSG00000026662	NonProperStrand	271	chr2	145077954	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-4.7652
chr7	38370726	38370744	protein_coding	Zfp536	intron	ENSMUSG00000043456	ProperStrand	57	chr7	54443198	54443228	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	1	-11.7014
chr2	22925000	22925073	protein_coding	Acbd5	utr5	ENSMUSG00000026781	ProperStrand	3	chr9	48707950	48707967	protein_coding	Htr3a	exon	ENSMUSG00000032269	NonProperStrand	20	1	-inf
chr9	64022854	64022923	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	chr3	95980322	95980412	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	4	-7.4147
chr16	20687254	20687338	protein_coding	Eif4g1	exon	ENSMUSG00000045983	ProperStrand	199	chr3	51222968	51223039	protein_coding	Naa15	intron	ENSMUSG00000063273	ProperStrand	34	6	-18.8803
chr9	102623006	102623096	protein_coding	Amotl2	exon	ENSMUSG00000032531	ProperStrand	54	chr4	131908265	131908355	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-4.5824
chr1	55134849	55141560	protein_coding	Hspd1	exon	ENSMUSG00000025980	ProperStrand	140	chr16	23111394	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-0.8068
chr7	133520549	133520567	protein_coding	Spns1	exon	ENSMUSG00000030741	NonProperStrand	16	chr17	24857725	24857815	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.7325
chr17	24527070	24527124	protein_coding	Abca3	intron	ENSMUSG00000024130	ProperStrand	20	chr9	120037899	120037989	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-6.8749
chr7	52382007	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	chr18	74938045	74938152	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	ProperStrand	1022	3	-4.4595
chr19	27292235	27292251	protein_coding	Vldlr	intron	ENSMUSG00000024924	NonProperStrand	36	chr8	32260329	32260370	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-5.6239
chr5	74489201	74489325	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr6	121286133	121286149	protein_coding	Slc6a13	exon	ENSMUSG00000030108	NonProperStrand	1	1	-inf
chr19	60850380	60850411	protein_coding	Eif3a	intron	ENSMUSG00000024991	ProperStrand	287	chrX	7372163	7372224	protein_coding	Gripap1	exon	ENSMUSG00000031153	ProperStrand	7	2	-21.3144
chr12	80165253	80165521	protein_coding	Plekhh1	exon	ENSMUSG00000060716	ProperStrand	24	chr7	148634702	148634782	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-5.7622
chr2	125082545	125082645	protein_coding	Dut	intron	ENSMUSG00000027203	ProperStrand	18	chr4	135849169	135849186	protein_coding	Zfp46	utr3	ENSMUSG00000051351	NonProperStrand	85	1	-15.0464
chr16	34549714	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	chr7	116664807	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.2784
chr4	137779415	137779472	protein_coding	Hp1bp3	exon	ENSMUSG00000028759	ProperStrand	21	chr19	8798507	8798553	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-7.2962
mmu-miR-361-5p	0	21	miRNA	mmu-miR-361-5p	.	mmu-miR-361-5p	ProperStrand	1	chr14	22200808	22200824	protein_coding	Adk	exon	ENSMUSG00000039197	ProperStrand	32	1	-inf
chr12	111929495	111929514	protein_coding	Hsp90aa1	utr3	ENSMUSG00000021270	ProperStrand	751	chr4	131866228	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	3	-0.9858
chr17	26766560	26771421	protein_coding	Ergic1	exon	ENSMUSG00000001576	ProperStrand	114	chr5	116011416	116011441	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	1	-8.8623
chr7	52714555	52714589	protein_coding	Ftl1	exon	ENSMUSG00000050708	ProperStrand	807	chr6	120479820	120479837	protein_coding	Cecr5	intron	ENSMUSG00000058979	ProperStrand	97	1	-7.1597
chr13	117089727	117089744	protein_coding	Isl1	exon	ENSMUSG00000042258	NonProperStrand	17	chr9	120039533	120039555	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-5.7441
chr10	61325507	61325524	protein_coding	Col13a1	exon	ENSMUSG00000058806	ProperStrand	120	chr19	8963097	8963182	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.2177
chr8	72555414	72557120	protein_coding	Mau2	exon	ENSMUSG00000031858	ProperStrand	17	chr16	23111448	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	5	-14.9947
chr11	70265787	70265877	protein_coding	Med11	intron	ENSMUSG00000018923	ProperStrand	3	chr19	8800375	8800455	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-9.7434
chr4	84320929	84321029	protein_coding	Bnc2	utr5	ENSMUSG00000028487	ProperStrand	76	chr9	15119993	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	3	-15.3922
chr3	94690740	94690830	protein_coding	Psmb4	exon	ENSMUSG00000005779	ProperStrand	26	chr8	73419693	73419773	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-11.2810
chr12	113029746	113029826	protein_coding	Klc1	intron	ENSMUSG00000021288	ProperStrand	35	chr7	26149754	26149844	protein_coding	Megf8	utr3	ENSMUSG00000045039	ProperStrand	100	3	-inf
chr13	46862925	46863005	snoRNA	ENSMUSG00000064558_SNORA55	.	ENSMUSG00000064558	ProperStrand	187	chr7	29136562	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-0.7403
chr2	118611946	118611962	protein_coding	Disp2	exon	ENSMUSG00000040035	NonProperStrand	204	chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	1	-9.2328
chrX	103390081	103397843	protein_coding	Pgk1	exon	ENSMUSG00000062070	ProperStrand	484	chr16	23110459	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	10	-6.0672
chr1	60541582	60541661	protein_coding	Raph1	intron	ENSMUSG00000026014	ProperStrand	19	chr4	32561587	32561609	protein_coding	Bach2	intron	ENSMUSG00000040270	NonProperStrand	16	1	-18.3346
chr11	68026518	68026608	protein_coding	Ntn1	exon	ENSMUSG00000020902	ProperStrand	44	chr11	69483195	69483276	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.9921
chr18	45832926	45832955	protein_coding	Kcnn2	intron	ENSMUSG00000054477	ProperStrand	26	chr18	35716848	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.6526
chr10	98487568	98487586	protein_coding	Atp2b1	utr3	ENSMUSG00000019943	ProperStrand	31	chr11	62416575	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-6.4673
chr9	118196930	118196963	misc_RNA	7SK	.	ENSMUSG00000084608	ProperStrand	1	chr16	23110828	23110874	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr4	130305550	130305621	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	chr9	15118332	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-0.8121
chr11	117689571	117689627	protein_coding	Afmid	intron	ENSMUSG00000017718	ProperStrand	3	chr17	24857717	24857742	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	3	-inf
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr1	162967490	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	7	-2.6175
chr16	90803618	90803675	protein_coding	Urb1	exon	ENSMUSG00000039929	ProperStrand	71	chr5	130295425	130295510	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-4.9221
chr19	38869531	38869547	protein_coding	Noc3l	exon	ENSMUSG00000024999	NonProperStrand	149	chr1	71698198	71699447	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	1	-6.0320
chr6	122678140	122678207	protein_coding	Slc2a3	utr3	ENSMUSG00000003153	ProperStrand	682	chr7	31663114	31664217	protein_coding	Cd22	utr5	ENSMUSG00000030577	NonProperStrand	128	1	-6.9425
chrX	70599124	70599204	protein_coding	Zfp275	exon	ENSMUSG00000031365	ProperStrand	9	chr2	4566620	4566710	protein_coding	Prpf18	exon	ENSMUSG00000039449	ProperStrand	16	2	-20.4442
chr4	129662259	129662276	protein_coding	Bai2	utr5	ENSMUSG00000028782	ProperStrand	119	chr8	98280192	98281337	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	3	-18.6806
chr11	108783076	108783093	protein_coding	Axin2	utr5	ENSMUSG00000000142	NonProperStrand	81	chr8	86205169	86207318	protein_coding	Pkn1	exon	ENSMUSG00000057672	ProperStrand	36	1	-13.7446
chr11	100924790	100924871	protein_coding	Atp6v0a1	utr3	ENSMUSG00000019302	ProperStrand	27	chr8	129468746	129468836	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-5.9715
chr8	109177546	109177676	protein_coding	Cdh1	exon	ENSMUSG00000000303	ProperStrand	283	chr15	34370551	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-2.0477
chr11	97785456	97785534	protein_coding	Plxdc1	utr3	ENSMUSG00000017417	NonProperStrand	2	chr8	73419654	73419717	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	NonProperStrand	53	1	-inf
chr2	145376671	145376688	antisense	Gm14092	.	ENSMUSG00000074753	ProperStrand	3	chr15	98350186	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	3	-inf
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr10	80965447	80965489	protein_coding	Gna15	utr3	ENSMUSG00000034792	ProperStrand	5	1	-14.0665
chr11	119207004	119207020	protein_coding	Sgsh	utr3	ENSMUSG00000005043	ProperStrand	67	chr9	64022856	64022921	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-7.8049
chr11	80965641	80965658	protein_coding	Accn1	exon	ENSMUSG00000020704	NonProperStrand	228	chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-5.1128
chr1	187177850	187180365	protein_coding	Bpnt1	exon	ENSMUSG00000026617	ProperStrand	15	chr10	23505151	23505196	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.5481
chrX	138774536	138774576	protein_coding	Acsl4	exon	ENSMUSG00000031278	ProperStrand	31	chr7	13516163	13516198	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	1	-9.9969
chr1	162965562	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr5	92485130	92485184	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	4	-1.6873
chrX	73120329	73120387	protein_coding	Pls3	utr5	ENSMUSG00000016382	ProperStrand	2	chr4	131908265	131908355	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-8.3123
chr3	85930796	85930834	protein_coding	Sh3d19	utr3	ENSMUSG00000028082	ProperStrand	58	chr8	115134894	115134911	protein_coding	Cntnap4	intron	ENSMUSG00000031772	NonProperStrand	5	1	-18.3398
chr18	34806692	34811213	protein_coding	Cdc23	exon	ENSMUSG00000024370	ProperStrand	48	chr18	35716840	35716884	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.5460
chr15	11680093	11680109	LINE	Lx7	L1	chr15Lx711680097	NonProperStrand	6	chr8	63704833	63704849	protein_coding	Sh3rf1	exon	ENSMUSG00000031642	ProperStrand	50	1	-18.0434
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr15	37313435	37313452	protein_coding	Ncald	intron	ENSMUSG00000051359	ProperStrand	28	2	-9.7134
chr8	125741087	125741105	protein_coding	4732415M23Rik	intron	ENSMUSG00000048478	ProperStrand	88	chr15	79913309	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.8988
chrX	123447247	123447267	LINE	Lx	L1	chrXLx123447240	ProperStrand	11	chr5	108334195	108334243	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	2	-13.2256
mmu-miR-6238	2	19	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr2	129998643	129998693	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	4	-16.4564
chr4	43505773	43505863	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr13	29042532	29042580	protein_coding	Sox4	utr3	ENSMUSG00000076431	ProperStrand	73	1	-2.7231
chr9	44143583	44143673	protein_coding	H2afx	utr3	ENSMUSG00000049932	ProperStrand	137	chr5	130300460	130300540	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.2269
chr5	104493995	104494020	protein_coding	Nudt9	exon	ENSMUSG00000029310	ProperStrand	9	chr11	6428065	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-11.2939
chr8	28361170	28361270	LTR	RMER6A	ERVK	chr8RMER6A28360939	ProperStrand	1	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-inf
chr2	164647046	164647146	protein_coding	Zswim3	exon	ENSMUSG00000045822	ProperStrand	9	chr1	162965981	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-7.3553
chr4	117810043	117810068	protein_coding	Kdm4a	utr3	ENSMUSG00000033326	ProperStrand	81	chr11	5180669	5180685	protein_coding	Znrf3	utr3	ENSMUSG00000041961	NonProperStrand	210	1	-10.1977
chr9	31227487	31227692	protein_coding	Nfrkb	exon	ENSMUSG00000042185	ProperStrand	34	chr9	120038566	120038607	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.0893
chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	chr2	158185600	158185654	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-3.2084
chr16	96381814	96381868	protein_coding	Lca5l	intron	ENSMUSG00000045275	NonProperStrand	210	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-6.4884
chr11	117016646	117016696	protein_coding	Sec14l1	exon	ENSMUSG00000020823	ProperStrand	71	chr5	74489564	74489654	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-3.4665
chr12	21397215	21397260	protein_coding	Ywhaq	utr3	ENSMUSG00000076432	ProperStrand	70	chr17	13112450	13112528	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	2	-7.1585
chrX	12648795	12648816	protein_coding	Usp9x	utr5	ENSMUSG00000031010	ProperStrand	174	chr19	46022236	46022252	protein_coding	9130011E15Rik	intron	ENSMUSG00000039901	ProperStrand	129	1	-9.6414
chr15	81110991	81111009	SINE	ID4	ID	chr15ID481110956	ProperStrand	272	chr2	75500762	75500779	protein_coding	Hnrnpa3	exon	ENSMUSG00000059005	ProperStrand	289	1	-7.1472
chr2	25312429	25313191	protein_coding	Clic3	exon	ENSMUSG00000015093	ProperStrand	79	chr8	113362479	113362513	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	1	-8.7142
chr4	106338303	106340142	protein_coding	Ttc4	exon	ENSMUSG00000025413	ProperStrand	16	chr19	8963077	8963167	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.7073
chr14	20608996	20609549	protein_coding	Nid2	exon	ENSMUSG00000021806	ProperStrand	372	chr1	88247787	88247867	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-1.8208
chr8	26149973	26149989	lincRNA	Gm16933	intron	ENSMUSG00000086289	ProperStrand	1	chr7	116663633	116663692	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-inf
chr5	115940317	115940407	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	chr7	117166742	117166841	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	2	-1.9154
chr2	129998643	129998703	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr15	36538567	36538668	protein_coding	Pabpc1	utr5	ENSMUSG00000022283	ProperStrand	908	1	-2.8904
chr1	36849488	36849517	protein_coding	Tmem131	utr3	ENSMUSG00000026116	ProperStrand	129	chr8	85689747	85689763	protein_coding	Tbc1d9	utr5	ENSMUSG00000031709	ProperStrand	66	1	-11.5845
chr5	89187611	89187667	protein_coding	Mob1b	utr3	ENSMUSG00000006262	ProperStrand	3	chr11	99885311	99885327	protein_coding	Krt33b	exon	ENSMUSG00000057723	NonProperStrand	352	1	-16.1518
chr3	3036847	3036866	LINE	L1VL4	L1	chr3L1VL43033630	NonProperStrand	1	chr4	43505862	43505931	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	1	-inf
chr11	77725334	77725420	LINE	L1ME4a	L1	chr11L1ME4a77725330	NonProperStrand	2	chr5	65883983	65884019	protein_coding	1110003E01Rik	utr5	ENSMUSG00000037822	ProperStrand	10	2	-inf
chr13	112391959	112391976	processed_transcript	Gm15286	.	ENSMUSG00000086649	NonProperStrand	16	chr18	34785254	34786379	protein_coding	Kif20a	exon	ENSMUSG00000003779	ProperStrand	50	1	-16.3661
chr3	3072604	3072684	LTR	MT2B	ERVL	chr3MT2B3072595	NonProperStrand	1	chr3	3072440	3072530	SINE	B1_Mur3	Alu	chr3B1_Mur33072455	NonProperStrand	1	1	-inf
chr10	127485575	127485600	protein_coding	Naca	utr3	ENSMUSG00000061315	ProperStrand	50	chr1	89673685	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-3.5979
chr9	49374873	49375446	protein_coding	Ncam1	exon	ENSMUSG00000039542	ProperStrand	18	chrX	77306658	77306675	pseudogene	Gm4773	.	ENSMUSG00000080847	NonProperStrand	11	1	-18.4766
chrX	130496426	130496668	protein_coding	Sytl4	exon	ENSMUSG00000031255	ProperStrand	169	chr16	17118454	17118559	protein_coding	2610318N02Rik	exon	ENSMUSG00000049916	ProperStrand	4	1	-16.8989
mmu-miR-6238	2	22	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr18	35716689	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	10	-10.5238
chr11	102265171	102265397	protein_coding	Slc25a39	exon	ENSMUSG00000018677	ProperStrand	35	chr1	3661500	3661517	protein_coding	Xkr4	utr5	ENSMUSG00000051951	ProperStrand	59	1	-14.4394
chr9	35022180	35022212	protein_coding	Srpr	exon	ENSMUSG00000032042	ProperStrand	54	chr19	8800421	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-6.3086
chr14	80262508	80262525	lincRNA	Gm6999	intron	ENSMUSG00000075495	ProperStrand	265	chr11	6428076	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-1.7752
chr1	75484537	75484553	protein_coding	Obsl1	exon	ENSMUSG00000026211	NonProperStrand	192	chr17	23952098	23952130	protein_coding	Srrm2	exon	ENSMUSG00000039218	ProperStrand	521	1	-6.6724
chr2	41199972	41199989	protein_coding	Lrp1b	exon	ENSMUSG00000049252	ProperStrand	376	chr6	72388906	72388923	protein_coding	Mat2a	intron	ENSMUSG00000053907	ProperStrand	51	1	-9.9639
chr18	33359097	33359197	protein_coding	Stard4	utr3	ENSMUSG00000024378	ProperStrand	21	chr9	120037983	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-6.7764
chr7	36366045	36366062	protein_coding	Rgs9bp	utr3	ENSMUSG00000056043	ProperStrand	12	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-6.7458
chr17	56761924	56762597	protein_coding	Lonp1	exon	ENSMUSG00000041168	ProperStrand	83	chr11	6428089	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.6179
chr17	13115655	13115767	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	11	-13.6588
chr17	39985044	39985110	pseudogene	AY036118	.	ENSMUSG00000045999	ProperStrand	57	chr7	117189977	117190058	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	NonProperStrand	17	1	-15.9510
chr11	69266813	69267278	protein_coding	Dnahc2	exon	ENSMUSG00000005237	ProperStrand	95	chr4	131908236	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-2.7691
chr17	66485639	66485698	protein_coding	Ddx11	utr5	ENSMUSG00000035842	ProperStrand	22	chr9	120039587	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-5.2308
chr16	95976751	95976841	LINE	L1ME2	L1	chr16L1ME295976361	NonProperStrand	1	chr16	95976887	95976967	LINE	L1ME2	L1	chr16L1ME295976894	NonProperStrand	1	1	-inf
chr12	76234327	76234346	protein_coding	Kcnh5	intron	ENSMUSG00000034402	NonProperStrand	3	chr10	110918549	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-9.6547
chr9	78215024	78215044	protein_coding	Dppa5a	utr3	ENSMUSG00000060461	ProperStrand	79	chr17	24857813	24857849	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.8501
chr2	145076803	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	chr4	116826700	116826766	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	2	-3.0495
mmu-miR-6240	2	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr13	95856366	95856384	protein_coding	Pde8b	intron	ENSMUSG00000021684	ProperStrand	43	1	-6.5623
chr16	31094080	31094117	protein_coding	Acap2	utr3	ENSMUSG00000049076	ProperStrand	17	chr14	33005131	33005188	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	2	-10.5242
chr5	110877312	110877328	protein_coding	Fbrsl1	utr5	ENSMUSG00000043323	ProperStrand	131	chr1	181027187	181027205	protein_coding	Smyd3	intron	ENSMUSG00000055067	ProperStrand	231	1	-9.0449
chr16	13332970	13332987	protein_coding	Mkl2	utr3	ENSMUSG00000009569	ProperStrand	55	chr17	69737986	69738002	protein_coding	Zfp161	utr3	ENSMUSG00000049672	NonProperStrand	45	1	-14.0647
chr4	43505792	43505872	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr10	87637142	87637232	protein_coding	Nup37	exon	ENSMUSG00000035351	ProperStrand	11	1	-6.3578
chr2	3328145	3328163	protein_coding	Meig1	intron	ENSMUSG00000026650	ProperStrand	18	chr8	126441405	126441421	protein_coding	Nup133	exon	ENSMUSG00000039509	ProperStrand	59	1	-15.7694
chr2	51967491	51967581	protein_coding	Rif1	exon	ENSMUSG00000036202	ProperStrand	201	chr3	108357301	108357381	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-2.3462
chr4	128028470	128028488	protein_coding	Csmd2	intron	ENSMUSG00000028804	ProperStrand	19	chr11	68716789	68716818	protein_coding	Rpl26	exon	ENSMUSG00000060938	ProperStrand	130	1	-14.0928
chr12	112122151	112122200	protein_coding	Cinp	exon	ENSMUSG00000021276	ProperStrand	18	chr8	25656321	25656338	protein_coding	Ido2	intron	ENSMUSG00000031549	NonProperStrand	29	1	-17.1594
chr12	68768937	68769017	LINE	L1Md_F2	L1	chr12L1Md_F268768613	ProperStrand	13	chr2	65541256	65541346	protein_coding	Scn2a1	intron	ENSMUSG00000075318	NonProperStrand	11	1	-19.3750
chr9	59526014	59526567	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr5	77738902	77738918	protein_coding	Noa1	exon	ENSMUSG00000036285	ProperStrand	147	1	-5.4147
chr16	20618607	20618657	protein_coding	Ece2	exon	ENSMUSG00000022842	ProperStrand	25	chr16	23110911	23111001	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.2939
chr5	136365330	136365361	protein_coding	Hspb1	utr3	ENSMUSG00000004951	ProperStrand	25	chr7	148634702	148634792	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-5.6811
chr11	121039156	121039236	protein_coding	1110031I02Rik	exon	ENSMUSG00000025169	ProperStrand	1	chr13	23647194	23647284	protein_coding	Hist1h1d	exon	ENSMUSG00000052565	ProperStrand	78	1	-inf
chr18	73693108	73693187	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr17	13112450	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	53	-19.6080
chr8	75005822	75005852	protein_coding	Slc35e1	utr3	ENSMUSG00000019731	NonProperStrand	1	chr12	60774056	60774110	snoRNA	ENSMUSG00000077603_SNORA3	.	ENSMUSG00000077603	ProperStrand	185	1	-inf
chr1	107743298	107743316	protein_coding	Tnfrsf11a	utr3	ENSMUSG00000026321	NonProperStrand	100	chr12	106269284	106269384	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	3	-8.0557
chr3	98117271	98117321	protein_coding	Phgdh	exon	ENSMUSG00000053398	ProperStrand	46	chr4	131908689	131908722	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.6050
chr2	164776206	164776223	protein_coding-noncoding	Mmp9	utr5	ENSMUSG00000017737	NonProperStrand	9	chr9	15118255	15118320	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-7.2077
chr9	78550961	78550977	protein_coding	Cd109	exon	ENSMUSG00000046186	NonProperStrand	36	chr9	15119722	15119769	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-8.8622
chr11	113730275	113731050	protein_coding	Sdk2	exon	ENSMUSG00000041592	NonProperStrand	98	chr5	130719404	130719474	protein_coding	0610007L01Rik	utr3	ENSMUSG00000053094	ProperStrand	39	1	-13.1946
chr12	111929845	111931049	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr14	33005138	33005222	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	3	-1.3411
chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	chr4	116828379	116828430	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-3.7856
chr6	128383289	128383613	protein_coding	Fkbp4	exon	ENSMUSG00000030357	ProperStrand	114	chr1	95327582	95327662	protein_coding	Hdlbp	exon	ENSMUSG00000034088	ProperStrand	97	1	-11.0589
chr17	45704965	45706046	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr17	35089182	35089243	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	2	-0.7473
chr10	39679333	39679349	protein_coding	BC021785	utr3	ENSMUSG00000038528	ProperStrand	6	chr4	131865855	131865879	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-6.1051
chr11	44373488	44373520	protein_coding	Rnf145	exon	ENSMUSG00000019189	ProperStrand	46	chr10	39978348	39978438	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	4	-18.0765
chr17	66273519	66273555	protein_coding	Twsg1	utr3	ENSMUSG00000024098	ProperStrand	22	chr9	15118259	15118350	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	3	-12.7089
chr5	115224631	115224647	antisense	4930515G01Rik	.	ENSMUSG00000092183	ProperStrand	1	chr18	53845596	53845612	protein_coding	Cep120	exon	ENSMUSG00000048799	ProperStrand	91	1	-inf
chr8	126521241	126521266	protein_coding	Taf5l	exon	ENSMUSG00000038697	ProperStrand	23	chr17	39985650	39985749	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-7.8467
chr7	31411126	31411145	protein_coding	Cox6b1	utr5	ENSMUSG00000036751	ProperStrand	23	chr18	39934974	39934990	protein_coding	Pabpc2	exon	ENSMUSG00000051732	NonProperStrand	66	1	-15.0523
chr9	4299367	4302483	protein_coding	Aasdhppt	exon	ENSMUSG00000025894	ProperStrand	121	chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-5.0816
chr13	98264510	98264610	lincRNA	Gm11019	exon	ENSMUSG00000078952	ProperStrand	113	chr6	24684480	24684497	protein_coding	Hyal6	exon	ENSMUSG00000029679	NonProperStrand	114	1	-10.7529
chr3	152450610	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	chr12	106269341	106269445	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	2	-1.2916
chr10	119548244	119549790	protein_coding	Helb	exon	ENSMUSG00000020228	ProperStrand	41	chr5	139686188	139686268	protein_coding	Sun1	utr5	ENSMUSG00000036817	ProperStrand	108	1	-12.9017
chr7	13510770	13511951	protein_coding	Rps5	exon	ENSMUSG00000012848	ProperStrand	108	chr18	35714145	35714263	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-4.2510
chr13	55643958	55644007	protein_coding	Fam193b	exon	ENSMUSG00000021495	ProperStrand	51	chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	1	-9.7242
chr4	71405678	71405768	LTR	ORR1A0-int	MaLR	chr4ORR1A0-int71404319	ProperStrand	1	chr4	19366122	19366212	protein_coding	Cngb3	intron	ENSMUSG00000056494	NonProperStrand	3	1	-inf
chr17	47820652	47820688	protein_coding	Usp49	utr3	ENSMUSG00000090115	ProperStrand	8	chr10	23505152	23505204	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.7871
chr11	53075147	53075227	protein_coding	Hspa4	exon	ENSMUSG00000020361	ProperStrand	69	chr5	121655057	121655147	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-5.9405
chr4	131866170	131866260	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	chr9	15130902	15130949	snoRNA	ENSMUSG00000077394_snoU2_19	.	ENSMUSG00000077394	ProperStrand	96	2	-4.8942
chr2	26315261	26315341	protein_coding	Notch1	exon	ENSMUSG00000026923	ProperStrand	145	chrX	9232471	9232562	protein_coding	Dynlt3	utr3	ENSMUSG00000031176	ProperStrand	1	1	-inf
chr1	120355716	120355798	snRNA	ENSMUSG00000080542_U4atac	.	ENSMUSG00000080542	ProperStrand	73	chr10	90581083	90581173	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	10	-inf
chr4	43505837	43505932	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr1	133878544	133878580	protein_coding	Slc45a3	utr3	ENSMUSG00000026435	ProperStrand	8	1	-7.0216
chr19	45308496	45308513	protein_coding	Lbx1	exon	ENSMUSG00000025216	ProperStrand	23	chr3	85944541	85944607	snoRNA	ENSMUSG00000064390_Rnu73b	.	ENSMUSG00000064390	ProperStrand	164	1	-13.2371
chr15	43001373	43001389	protein_coding	Rspo2	utr5	ENSMUSG00000051920	NonProperStrand	3	chr3	108228259	108228275	protein_coding	Sars	utr3	ENSMUSG00000068739	NonProperStrand	200	1	-17.2921
chr16	18403446	18403462	protein_coding	Arvcf	exon	ENSMUSG00000000325	NonProperStrand	3	chr8	98269994	98270074	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	2	-19.3645
chr8	93848772	93848862	protein_coding	Fto	intron	ENSMUSG00000055932	ProperStrand	34	chr3	123210894	123210974	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.0438
chr4	82551672	82551691	protein_coding	Frem1	intron	ENSMUSG00000059049	NonProperStrand	14	chr1	162968441	162968514	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-9.0114
chr9	24549583	24549615	protein_coding	Tbx20	intron	ENSMUSG00000031965	NonProperStrand	110	chr11	69483136	69483192	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-2.7872
chr1	195125728	195125745	LINE	L2a	L2	chr1L2a195125465	NonProperStrand	28	chr9	120038467	120038519	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-7.4583
chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr7	134671387	134671518	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	12	-6.8741
chr8	98257020	98257074	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	chr12	77066968	77066984	protein_coding	Syne2	exon	ENSMUSG00000063450	ProperStrand	63	1	-9.8923
chr11	87255777	87255798	protein_coding	Tex14	intron	ENSMUSG00000010342	NonProperStrand	5	chr4	131865868	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-10.8861
chr13	58229383	58229417	protein_coding	Hnrnpa0	exon	ENSMUSG00000007836	ProperStrand	110	chr14	33005111	33005211	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-2.8859
chr3	129655419	129655509	protein_coding	Ccdc109b	intron	ENSMUSG00000027994	ProperStrand	1	chr3	130295712	130295792	protein_coding	Col25a1	intron	ENSMUSG00000058897	ProperStrand	27	1	-inf
chr7	31936099	31936122	lincRNA	G630030J09Rik	exon	ENSMUSG00000085458	ProperStrand	3	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-17.2827
chr9	64022855	64022878	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	chr1	87983919	87983997	snoRNA	ENSMUSG00000077274_SNORA26	.	ENSMUSG00000077274	ProperStrand	361	2	-7.4820
chr7	87237336	87237416	protein_coding	Zfp710	utr3	ENSMUSG00000048897	ProperStrand	229	chr11	6428077	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	6	-8.2470
chr2	29019965	29020065	protein_coding	Setx	exon	ENSMUSG00000043535	ProperStrand	187	chr11	97642952	97642989	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-0.8106
chr13	51743640	51743703	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	chr3	153574629	153574656	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	1	-3.3717
chr13	9833551	9833617	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr12	111901394	111904295	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	7	-9.4472
chr4	41146284	41146562	protein_coding	Ubap2	exon	ENSMUSG00000028433	ProperStrand	292	chr14	76247754	76247844	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-1.4562
chr2	158185602	158185666	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr11	106362672	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	2	-2.3225
chr16	38887912	38887928	LTR	LTR16E2	ERVL	chr16LTR16E238887600	NonProperStrand	6	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-11.9490
chr4	101026600	101026635	lincRNA	E130102H24Rik	intron	ENSMUSG00000086782	ProperStrand	5	chr12	111873872	111873950	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	1	-13.7146
chr2	90235292	90235330	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	115545934	115547204	protein_coding	Sppl3	exon	ENSMUSG00000029550	ProperStrand	33	3	-13.1191
chr9	88419023	88419040	SINE	B4	B4	chr9B488418988	ProperStrand	75	chr6	7625417	7625465	protein_coding	Asns	exon	ENSMUSG00000029752	ProperStrand	59	1	-12.8986
chr16	16323855	16324068	protein_coding	Dnm1l	exon	ENSMUSG00000022789	NonProperStrand	38	chr4	131865856	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.5179
chr2	165880406	165880506	protein_coding	Ncoa3	exon	ENSMUSG00000027678	ProperStrand	58	chr13	114385050	114407035	protein_coding	Snx18	exon	ENSMUSG00000042364	ProperStrand	47	1	-13.8822
chr10	127505743	127505776	protein_coding	Ptges3	exon	ENSMUSG00000071072	ProperStrand	89	chr6	115757992	115758047	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-4.7083
chr2	165109024	165109052	protein_coding	Slc35c2	utr5	ENSMUSG00000017664	ProperStrand	39	chr8	73419657	73419740	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-6.6255
chr11	88581692	88581753	lincRNA	C030037D09Rik	exon	ENSMUSG00000087574	ProperStrand	8	chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	1	-13.3216
chr11	97641452	97641591	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	chr4	131908231	131908450	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	15	-0.9896
chr14	55195121	55195211	protein_coding	Jub	exon	ENSMUSG00000022178	ProperStrand	25	chr18	35716762	35716842	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.7263
chr2	120181968	120182030	protein_coding	Tmem87a	utr3	ENSMUSG00000033808	ProperStrand	5	chr11	72695721	72695738	protein_coding	Zzef1	intron	ENSMUSG00000055670	ProperStrand	48	1	-18.4151
chr2	32390978	32391041	protein_coding	Fam102a	utr5	ENSMUSG00000039157	ProperStrand	11	chr13	56353448	56353465	protein_coding	Neurog1	utr5	ENSMUSG00000048904	ProperStrand	105	1	-15.6522
chr13	105848213	105848231	SINE	RSINE1	B4	chr13RSINE1105848156	NonProperStrand	10	chr19	8963086	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.6521
chr2	153227447	153227525	protein_coding	Asxl1	exon	ENSMUSG00000042548	ProperStrand	76	chr10	23505159	23505249	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-4.4359
chr2	119114607	119114623	protein_coding	Vps18	utr5	ENSMUSG00000034216	NonProperStrand	40	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.0291
chr17	46884450	46884466	protein_coding	Cnpy3	exon	ENSMUSG00000023973	ProperStrand	85	chr10	90581151	90581208	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-4.1425
chr1	109929238	109929328	LINE	Lx7	L1	chr1Lx7109929242	ProperStrand	1	chr1	109929086	109929166	LTR	ORR1C1	MaLR	chr1ORR1C1109928869	NonProperStrand	1	1	-inf
chr11	103221919	103221971	antisense	Gm11647	.	ENSMUSG00000085360	ProperStrand	22	chr17	46663594	46663610	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	1	-11.2606
chr18	64667476	64670108	protein_coding	Nars	exon	ENSMUSG00000024587	ProperStrand	97	chr13	112278554	112278570	protein_coding	Gpbp1	utr5	ENSMUSG00000032745	ProperStrand	85	1	-11.6482
chr7	29136014	29137200	protein_coding	Rps16	exon	ENSMUSG00000037563	ProperStrand	191	chr10	23506279	23506303	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-4.6847
chr11	116299384	116299444	protein_coding	Fam100b	exon	ENSMUSG00000050628	ProperStrand	97	chr7	51505224	51505308	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	3	-16.2096
chr11	29677073	29677089	protein_coding	Eml6	exon	ENSMUSG00000044072	NonProperStrand	8	chr8	73419657	73419757	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-7.0879
chr10	94151579	94151595	protein_coding	Ccdc41	utr5	ENSMUSG00000020024	NonProperStrand	34	chr2	59683580	59683627	protein_coding	Tanc1	utr3	ENSMUSG00000035168	ProperStrand	80	1	-13.8803
chr14	55187172	55187272	protein_coding	Jub	utr3	ENSMUSG00000022178	ProperStrand	25	chr5	130300497	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.1053
chr7	30231480	30231582	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	chr12	112779148	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	2	-1.9884
chr15	57860319	57860419	protein_coding	9130401M01Rik	exon	ENSMUSG00000022362	ProperStrand	4	chr2	166890803	166890858	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	1	-16.0670
chr3	94839221	94839732	protein_coding	Psmd4	exon	ENSMUSG00000005625	ProperStrand	20	chr5	34981548	34981648	protein_coding	Nop14	exon	ENSMUSG00000036693	ProperStrand	35	1	-16.6921
chrX	72214248	72214264	protein_coding-noncoding	Gab3	utr3	ENSMUSG00000032750	ProperStrand	420	chr6	71832550	71832603	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-2.0491
chr1	66521957	66521973	protein_coding	Unc80	intron	ENSMUSG00000055567	NonProperStrand	212	chr4	132394372	132394418	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	1	-6.6261
chr17	24858054	24858809	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr7	116664794	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-1.1287
chr2	125389949	125389966	protein_coding	Cep152	exon	ENSMUSG00000068394	ProperStrand	60	chr4	131908270	131908297	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.4187
chr7	36388906	36389233	protein_coding	Ankrd27	exon	ENSMUSG00000034867	ProperStrand	132	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-8.8483
chr16	64856126	64856179	protein_coding	Cggbp1	utr3	ENSMUSG00000054604	ProperStrand	7	chr16	23110536	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-6.6152
chr5	115940316	115940407	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	chr5	74489563	74489643	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	16	-20.7809
chr5	54389949	54389965	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	chr18	35716755	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	10	-11.6746
chr13	112540780	112541440	protein_coding	Map3k1	exon	ENSMUSG00000021754	ProperStrand	113	chr4	136133022	136133098	protein_coding	Kdm1a	exon	ENSMUSG00000036940	ProperStrand	83	1	-11.3895
chr7	119934389	119934417	protein_coding	Tead1	intron	ENSMUSG00000055320	ProperStrand	217	chr19	8800355	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	3	-4.1080
chr4	154532161	154532211	protein_coding	Ski	exon	ENSMUSG00000029050	ProperStrand	28	chr9	50413550	50413567	protein_coding	AU019823	utr3	ENSMUSG00000059820	NonProperStrand	18	1	-17.1454
chr14	64081493	64081512	protein_coding	Fam167a	utr3	ENSMUSG00000035095	ProperStrand	80	chr7	116664819	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.0674
chr7	52381972	52381995	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	chr17	35088970	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	3	-1.7917
chr10	79436233	79436264	protein_coding	Grin3b	intron	ENSMUSG00000035745	NonProperStrand	3	chr1	145626057	145626139	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-15.2101
chr4	154481693	154481714	protein_coding	Morn1	intron	ENSMUSG00000029049	ProperStrand	7	chr5	116009832	116010774	protein_coding	Rplp0	utr5	ENSMUSG00000067274	ProperStrand	291	1	-14.5778
chr7	53069603	53069683	protein_coding	Cyth2	utr5	ENSMUSG00000003269	ProperStrand	15	chr9	120039591	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	3	-14.0416
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr8	113362148	113362217	protein_coding	Sf3b3	exon	ENSMUSG00000033732	ProperStrand	181	1	-2.8990
chr3	156224612	156224628	lincRNA	4930570G19Rik	exon	ENSMUSG00000085084	ProperStrand	326	chr17	25035993	25036142	protein_coding	Mapk8ip3	exon	ENSMUSG00000024163	ProperStrand	10	1	-13.5912
chr12	75033370	75033386	lincRNA	Gm15283	exon	ENSMUSG00000087700	ProperStrand	30	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-8.5933
chr3	141975242	141975319	protein_coding	Pdlim5	exon	ENSMUSG00000028273	ProperStrand	17	chr5	74489575	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-6.2343
chr18	41356147	41356186	miRNA	Mir5097	dead	ENSMUSG00000093361	ProperStrand	221	chr19	3612010	3612069	protein_coding	Lrp5	intron	ENSMUSG00000024913	ProperStrand	145	1	-8.9304
chr8	125109311	125109328	protein_coding	Galns	intron	ENSMUSG00000015027	ProperStrand	12	chr1	162965531	162965577	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-6.4045
chr5	141964444	141964524	protein_coding	Sdk1	intron	ENSMUSG00000039683	NonProperStrand	21	chr3	84331062	84331152	protein_coding	Arfip1	intron	ENSMUSG00000074513	ProperStrand	49	1	-15.8608
chr15	54930198	54930220	LTR	RMER17B	ERVK	chr15RMER17B54930056	NonProperStrand	1	chr16	23110472	23110526	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-inf
chr15	97518656	97521657	protein_coding	Rpap3	exon	ENSMUSG00000022466	ProperStrand	13	chr6	112689098	112689322	protein_coding	Srgap3	exon	ENSMUSG00000030257	NonProperStrand	208	1	-13.9332
chr19	3946356	3946378	protein_coding	Unc93b1	intron	ENSMUSG00000036908	ProperStrand	5	chr3	108357255	108357355	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-9.6221
chr9	121678095	121678111	protein_coding	Zfp651	utr3	ENSMUSG00000013419	NonProperStrand	20	chr16	23111448	23111500	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.0472
chr15	10504728	10504818	protein_coding	Rai14	exon	ENSMUSG00000022246	ProperStrand	180	chr17	24857715	24857795	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-0.7375
chr11	120678560	120678863	protein_coding	Fasn	exon	ENSMUSG00000025153	ProperStrand	298	chr12	55835622	55835702	snRNA	ENSMUSG00000075960_U1	.	ENSMUSG00000075960	ProperStrand	210	1	-7.5988
chr7	27978060	27980483	protein_coding	Snrpa	exon	ENSMUSG00000061479	ProperStrand	56	chr10	127521198	127521270	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	3	-20.9318
chr7	52974664	52975705	protein_coding	Rpl18	exon	ENSMUSG00000059070	ProperStrand	116	chr11	69483188	69483279	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-2.6614
chr10	128021465	128021482	protein_coding	Erbb3	exon	ENSMUSG00000018166	ProperStrand	49	chr2	158185607	158185653	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-6.8879
chr1	132639189	132639207	protein_coding	AA986860	exon	ENSMUSG00000042510	ProperStrand	15	chr15	98350202	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	4	-inf
chr15	100447399	100447435	protein_coding	Dazap2	exon	ENSMUSG00000000346	ProperStrand	5	chr16	23111447	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-9.8515
chr17	23818197	23818216	protein_coding	Cldn6	exon	ENSMUSG00000023906	NonProperStrand	1	chr11	51551280	51551418	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	1	-inf
chr13	23627394	23627484	protein_coding	Hist1h3g	exon	ENSMUSG00000062417	ProperStrand	25	chr10	23505175	23505255	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-4.6249
chr3	55435951	55435967	protein_coding	Nbea	exon	ENSMUSG00000027799	NonProperStrand	115	chr6	105889644	105889665	protein_coding	Cntn4	intron	ENSMUSG00000064293	ProperStrand	4	1	-17.6377
chr5	152198645	152198661	lincRNA	1700028E10Rik	exon	ENSMUSG00000087548	ProperStrand	53	chr19	8963051	8963084	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.4846
chr7	3367322	3367395	protein_coding	Cacng7	utr3	ENSMUSG00000069806	ProperStrand	29	chrX	34622930	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-4.5339
chr5	92497353	92497481	protein_coding	G3bp2	exon	ENSMUSG00000029405	ProperStrand	78	chr4	53873613	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	3	-18.4174
chr17	39979944	39979984	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr2	158185569	158185651	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	2	-2.1210
chr11	106116408	106116498	protein_coding-noncoding	Ftsj3	utr3	ENSMUSG00000020706	NonProperStrand	1	chr4	126065099	126065189	protein_coding	Eif2c3	intron	ENSMUSG00000028842	ProperStrand	8	1	-inf
chr11	121009128	121009200	protein_coding	Tex19.1	utr3	ENSMUSG00000039329	ProperStrand	12	chr16	23110509	23110529	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.4970
chr8	41570003	41570019	protein_coding	Zdhhc2	utr3	ENSMUSG00000039470	NonProperStrand	85	chr11	68886962	68887055	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	2	-5.9449
chr8	125627222	125627824	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	chr1	162966019	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-2.5662
chr1	53404156	53404197	protein_coding	Asnsd1	exon	ENSMUSG00000026095	ProperStrand	6	chr14	52829460	52829550	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-12.9564
chr7	19590197	19590213	protein_coding	Irf2bp1	exon	ENSMUSG00000044030	NonProperStrand	81	chr14	119693352	119693368	protein_coding	Hs6st3	intron	ENSMUSG00000053465	NonProperStrand	134	1	-11.0968
chr4	131908360	131908442	lincRNA	Gm17300	exon	ENSMUSG00000091021	ProperStrand	109	chr17	24857729	24857829	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	NonProperStrand	27	1	-13.7297
chr11	45723144	45723160	protein_coding	Clint1	utr3	ENSMUSG00000006169	NonProperStrand	273	chr5	121655016	121655072	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-1.2321
chr3	129235373	129235597	protein_coding	Elovl6	utr5	ENSMUSG00000041220	ProperStrand	59	chr17	13112566	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	3	-11.0058
chr11	79259491	79259571	protein_coding	Nf1	intron	ENSMUSG00000020716	NonProperStrand	5	chr11	79332248	79332338	protein_coding	Evi2b	intron	ENSMUSG00000070354	ProperStrand	2	1	-inf
chr14	32072240	32072330	protein_coding	Bap1	utr3	ENSMUSG00000021901	ProperStrand	12	chr4	131866162	131866242	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-6.8239
chr14	32515404	32515460	protein_coding	Ankrd28	exon	ENSMUSG00000014496	ProperStrand	39	chr18	35716763	35716853	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-10.2178
chr3	104764495	104764511	protein_coding	Wnt2b	utr5	ENSMUSG00000027840	NonProperStrand	50	chr9	81949792	81949813	protein_coding	Mei4	intron	ENSMUSG00000043289	NonProperStrand	42	1	-14.3973
chr4	151404150	151404240	protein_coding-noncoding	Tas1r1	utr3	ENSMUSG00000028950	ProperStrand	1	chr4	131908814	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-inf
chr2	32162200	32162216	protein_coding	Golga2	utr3	ENSMUSG00000002546	NonProperStrand	35	chr6	7635412	7635467	protein_coding	Asns	intron	ENSMUSG00000029752	ProperStrand	59	1	-14.4394
chr8	126331980	126332026	protein_coding	Rab4a	intron	ENSMUSG00000019478	ProperStrand	9	chr3	123210880	123210970	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	5	-20.1796
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr8	95505795	95505812	protein_coding	Slc6a2	exon	ENSMUSG00000055368	NonProperStrand	21	1	-10.9145
chrX	166427088	166427178	protein_coding	Mid1	utr3	ENSMUSG00000035299	ProperStrand	209	chr7	117166783	117166863	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	2	-4.4338
chr6	136756926	136757034	protein_coding	H2afj	exon	ENSMUSG00000060032	ProperStrand	25	chr19	8799831	8799857	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-6.6734
chrX	158280998	158281016	protein_coding	Nhs	exon	ENSMUSG00000059493	ProperStrand	16	chr2	26768392	26768433	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-8.2494
chr7	134731424	134731440	protein_coding	Gm166	exon	ENSMUSG00000057176	ProperStrand	22	chr2	130101241	130101310	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	2	-13.7305
chr11	19923519	19923619	protein_coding	Spred2	utr3	ENSMUSG00000045671	ProperStrand	106	chr7	52382753	52382780	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-5.6315
chr6	35144563	35146516	protein_coding	Nup205	exon	ENSMUSG00000038759	ProperStrand	56	chr11	69483136	69483212	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.5680
chr4	116317897	116324163	protein_coding	Akr1a1	intron	ENSMUSG00000028692	ProperStrand	35	chr7	29136525	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-5.6959
chr17	86434790	86434865	protein_coding	Srbd1	intron	ENSMUSG00000024135	ProperStrand	16	chr1	89673606	89673696	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-5.8062
chr17	57129779	57129879	protein_coding	Clpp	exon	ENSMUSG00000002660	ProperStrand	15	chr16	23110972	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.0842
chr1	133057866	133057920	protein_coding	Eif2d	exon	ENSMUSG00000026427	ProperStrand	12	chr9	15514257	15514276	protein_coding	Slc36a4	exon	ENSMUSG00000043885	ProperStrand	94	1	-15.6693
chr12	3968611	3968627	protein_coding	Efr3b	exon	ENSMUSG00000020658	ProperStrand	142	chr1	162965531	162965582	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.8102
chr17	46680278	46680295	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr18	35714144	35714259	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	7	-6.4249
chr5	31357237	31357253	protein_coding	Cad	utr5	ENSMUSG00000013629	ProperStrand	260	chr6	131330343	131330424	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	ProperStrand	408	1	-6.5562
chr1	182836732	182836812	protein_coding	Pycr2	exon	ENSMUSG00000026520	ProperStrand	89	chr18	35716739	35716829	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.5511
chr2	90235315	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	135327523	135329683	protein_coding	Myom3	exon	ENSMUSG00000037139	NonProperStrand	62	1	-4.4001
chr12	105582410	105582426	protein_coding	Serpina3k	exon	ENSMUSG00000058207	ProperStrand	14	chr16	23110455	23110508	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.1866
chr4	116883476	116883564	snRNA	ENSMUSG00000070237_U5	.	ENSMUSG00000070237	ProperStrand	154	chr11	6428035	6428083	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.6154
chr2	36405231	36405311	LINE	L1_Mus1	L1	chr2L1_Mus136404930	ProperStrand	1	chr6	79074029	79074119	LINE	L1Md_F2	L1	chr6L1Md_F279072812	ProperStrand	1	1	-inf
chr13	9833553	9833683	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr7	67123720	67123759	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	3	-4.6258
chr19	50661600	50661618	protein_coding	Sorcs1	intron	ENSMUSG00000043531	NonProperStrand	7	chr4	131908361	131908444	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-5.3201
chr19	5493425	5493481	protein_coding	Cfl1	exon	ENSMUSG00000056201	ProperStrand	88	chr2	145077957	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-6.9614
chr10	118676264	118676354	protein_coding	Cand1	utr5	ENSMUSG00000020114	ProperStrand	76	chr10	119142001	119142091	protein_coding	Grip1	intron	ENSMUSG00000034813	NonProperStrand	28	1	-14.3705
chr11	120676398	120676470	protein_coding	Fasn	exon	ENSMUSG00000025153	ProperStrand	298	chr8	83403330	83403347	protein_coding	Gab1	intron	ENSMUSG00000031714	NonProperStrand	8	1	-14.2392
chr11	62416575	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	chr2	26494708	26494842	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	25	-2.0829
chr10	80640434	80640524	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr18	10151059	10151139	snRNA	ENSMUSG00000065941_U1	.	ENSMUSG00000065941	ProperStrand	47	1	-6.5821
chr4	108745518	108745661	protein_coding	Osbpl9	exon	ENSMUSG00000028559	ProperStrand	17	chr11	69483192	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	4	-15.4040
chr11	113524705	113524795	protein_coding	D11Wsu99e	exon	ENSMUSG00000041629	ProperStrand	28	chr19	8963096	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	19	-19.6563
chr5	89206421	89206438	protein_coding	Dck	intron	ENSMUSG00000029366	ProperStrand	12	chr4	131865856	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.6729
chr17	25977630	25977665	protein_coding	Rhot2	exon	ENSMUSG00000025733	ProperStrand	9	chr19	7049699	7049738	protein_coding	Ppp1r14b	utr5	ENSMUSG00000056612	ProperStrand	5	1	-18.8319
chr15	97575528	97575546	protein_coding	Rapgef3	utr3	ENSMUSG00000022469	NonProperStrand	3	chr2	153050783	153050799	protein_coding	Tspyl3	exon	ENSMUSG00000074671	ProperStrand	228	1	-17.0107
chr5	54044382	54044555	protein_coding	Rbpj	exon	ENSMUSG00000039191	ProperStrand	96	chr19	8800369	8800459	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	4	-9.5047
chr2	119742734	119742791	protein_coding	Mga	exon	ENSMUSG00000033943	ProperStrand	180	chr11	69481335	69481433	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	4	-5.8369
chr5	143142918	143145413	protein_coding	Wipi2	utr3	ENSMUSG00000029578	ProperStrand	49	chr17	24857717	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	5	-12.1870
chr10	11379377	11379395	LTR	RMER6A	ERVK	chr10RMER6A11378998	ProperStrand	1	chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	1	-inf
chr7	87856672	87856762	protein_coding	Iqgap1	utr3	ENSMUSG00000030536	ProperStrand	43	chr5	130295415	130295495	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-5.9014
chr10	77452995	77453421	protein_coding	Pfkl	exon	ENSMUSG00000020277	ProperStrand	179	chr7	116663640	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	4	-4.2594
chr6	11956996	11957096	protein_coding	Phf14	exon	ENSMUSG00000029629	ProperStrand	26	chr4	131908689	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.5345
chr13	88569462	88569482	LTR	RMER6D	ERVK	chr13RMER6D88569354	ProperStrand	42	chr2	165203163	165203180	protein_coding	Zfp334	utr3	ENSMUSG00000017667	NonProperStrand	33	1	-15.2280
chr8	128995278	128998158	protein_coding	Gm17296	exon	ENSMUSG00000090290	ProperStrand	6	chr2	130101259	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-11.3294
chr3	97904180	97904228	protein_coding	Notch2	exon	ENSMUSG00000027878	ProperStrand	86	chr12	110918155	110918221	snoRNA	ENSMUSG00000065749_AF357428	.	ENSMUSG00000065749	ProperStrand	218	2	-15.7775
chr9	78023109	78023148	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr4	46515733	46515833	protein_coding	Nans	utr3	ENSMUSG00000028334	ProperStrand	18	1	-8.2901
chr7	123476488	123476554	protein_coding	Rps13	exon	ENSMUSG00000090862	ProperStrand	36	chr16	23110985	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.8249
chr7	134671399	134671520	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	chr11	69481333	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	9	-3.6392
chr5	74489239	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr14	76372327	76372407	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	1	-1.7226
chr3	89184320	89184336	protein_coding	Zbtb7b	exon	ENSMUSG00000028042	ProperStrand	19	chr1	164643454	164644401	protein_coding	Prrc2c	exon	ENSMUSG00000040225	ProperStrand	413	1	-11.7813
chr16	18077612	18077917	protein_coding	Prodh	exon	ENSMUSG00000003526	ProperStrand	3	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-8.4253
chr6	119988518	119988571	protein_coding	Wnk1	utr5	ENSMUSG00000045962	ProperStrand	221	chr1	63225612	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-4.1397
chr2	181237627	181242947	protein_coding	Tpd52l2	exon	ENSMUSG00000000827	ProperStrand	20	chr17	24857749	24857829	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	5	-17.6789
chr17	46814084	46814100	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr16	20684535	20684577	protein_coding	Eif4g1	exon	ENSMUSG00000045983	ProperStrand	199	1	-6.8427
chr4	131865380	131865480	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	NonProperStrand	15	chr11	69483247	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	NonProperStrand	35	3	-inf
chr6	128902997	128903013	antisense	Gm15987	.	ENSMUSG00000085786	ProperStrand	5	chr1	89673554	89673588	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-8.2536
chr4	138842943	138842982	protein_coding	Capzb	exon	ENSMUSG00000028745	ProperStrand	44	chr16	23111392	23111447	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-4.9105
chr14	45949538	45949554	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	chr16	91659920	91659960	protein_coding	Son	exon	ENSMUSG00000022961	ProperStrand	59	1	-9.9556
chr10	30320342	30320358	protein_coding	Trmt11	intron	ENSMUSG00000019792	NonProperStrand	26	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-8.8831
chr17	35796976	35797066	protein_coding	Vars2	exon	ENSMUSG00000038838	ProperStrand	19	chr10	23505172	23505252	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.1073
chrX	101578476	101578540	protein_coding	Abcb7	intron	ENSMUSG00000031333	ProperStrand	22	chr4	131908300	131908340	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-5.3518
chr13	98271112	98271168	LINE	Lx8	L1	chr13Lx898270951	ProperStrand	1	chr13	112540780	112541440	protein_coding	Map3k1	exon	ENSMUSG00000021754	ProperStrand	113	1	-inf
chr13	9833551	9833618	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr10	10912334	10914014	protein_coding	Shprh	exon	ENSMUSG00000090112	ProperStrand	52	6	-18.9321
mmu-miR-5099	4	20	miRNA	mmu-miR-5099	.	mmu-miR-5099	ProperStrand	5	chr10	110918551	110918641	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-8.4568
chr13	23646908	23647008	protein_coding	Hist1h1d	utr5	ENSMUSG00000052565	ProperStrand	78	chr15	82980150	82980224	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-6.6188
chr14	103475133	103475156	protein_coding	Cln5	exon	ENSMUSG00000022125	ProperStrand	6	chr16	23111728	23111828	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-15.1980
chr3	96527940	96527956	protein_coding	Polr3c	exon	ENSMUSG00000028099	NonProperStrand	75	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-8.4797
chr14	32069353	32069453	protein_coding	Bap1	exon	ENSMUSG00000021901	ProperStrand	12	chr1	162965536	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-6.4045
chr2	144087324	144087449	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	chr15	71624775	71624797	snoRNA	ENSMUSG00000088895_SNORA81	.	ENSMUSG00000088895	ProperStrand	348	3	-8.0171
chr1	54571700	54571717	protein_coding	Pgap1	exon	ENSMUSG00000070889	NonProperStrand	4	chr17	35299511	35299565	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-10.3796
chr8	67785118	67785135	LINE	L1_Mur3	L1	chr8L1_Mur367784344	NonProperStrand	5	chr19	41991163	41991186	protein_coding	Pgam1	exon	ENSMUSG00000011752	ProperStrand	124	1	-16.9751
chr4	133683708	133683851	protein_coding	Sh3bgrl3	exon	ENSMUSG00000028843	ProperStrand	2	chr9	120039545	120039622	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-10.6072
chr4	115164807	115164823	protein_coding	Cyp4a14	exon	ENSMUSG00000028715	ProperStrand	14	chr7	117190032	117190059	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-6.1508
chr19	53993085	53993175	protein_coding	Pdcd4	intron	ENSMUSG00000024975	ProperStrand	21	chr18	35714205	35714285	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-5.4554
chr9	64024498	64024567	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	chr9	64143777	64143877	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-3.0199
chr2	14920145	14920168	protein_coding	Nsun6	intron	ENSMUSG00000026707	ProperStrand	7	chr2	35977971	35978032	protein_coding	Rbm18	intron	ENSMUSG00000026889	ProperStrand	5	3	-19.9996
chr11	98631572	98631589	protein_coding	Nr1d1	exon	ENSMUSG00000020889	NonProperStrand	1	chr11	97642984	97643075	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-inf
chr15	96528433	96528660	protein_coding	Slc38a2	exon	ENSMUSG00000022462	ProperStrand	133	chr11	68887036	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-2.6937
chr8	114009078	114009112	protein_coding	Wdr59	exon	ENSMUSG00000031959	ProperStrand	18	chr16	11399865	11400904	protein_coding	Snx29	exon	ENSMUSG00000079738	ProperStrand	4	1	-19.8468
chr17	39979943	39979984	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr7	104667659	104667702	protein_coding	Ints4	exon	ENSMUSG00000025133	ProperStrand	19	1	-9.5425
chr11	101833237	101833253	protein_coding	Dusp3	utr3	ENSMUSG00000003518	NonProperStrand	8	chr15	77597977	77597993	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	1	-12.9426
chr9	70960077	70960093	protein_coding	Aqp9	exon	ENSMUSG00000032204	NonProperStrand	118	chr9	120038636	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.8934
chr17	65452916	65452938	LTR	MTC	MaLR	chr17MTC65452903	NonProperStrand	12	chr7	116664843	116664924	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-5.5966
chr11	116704531	116704548	protein_coding	Jmjd6	utr5	ENSMUSG00000056962	ProperStrand	92	chr10	23505152	23505252	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-0.7103
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr9	59516458	59526694	protein_coding	Pkm2	utr3	ENSMUSG00000032294	ProperStrand	1296	2	-2.6902
chr7	24779190	24779213	SINE	ID_B1	B4	chr7ID_B124779183	NonProperStrand	54	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	3	-16.3184
chr18	35105646	35106205	protein_coding	Hspa9	exon	ENSMUSG00000024359	ProperStrand	166	chr16	23110530	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-0.9437
chr19	61251048	61251128	LTR	MT2_Mm	ERVL	chr19MT2_Mm61250656	ProperStrand	2	chr12	29122940	29123030	protein_coding	Dcdc2c	utr3	ENSMUSG00000020633	ProperStrand	6	1	-inf
chr7	25673362	25673405	protein_coding	Rps19	exon	ENSMUSG00000040952	ProperStrand	101	chr5	130300461	130300551	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.6652
chr4	149780705	149989813	protein_coding	Rere	exon	ENSMUSG00000039852	ProperStrand	76	chr16	23110829	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-3.3079
chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	chr11	69483195	69483263	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-0.9476
chr8	95376591	95376623	protein_coding	Mmp2	utr3	ENSMUSG00000031740	ProperStrand	42	chr7	116664811	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.1799
chr12	4134901	4134981	protein_coding	Adcy3	exon	ENSMUSG00000020654	ProperStrand	33	chr16	23110862	23110952	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.9284
chr3	79284921	79284970	protein_coding	Fnip2	exon	ENSMUSG00000061175	ProperStrand	45	chr17	24857796	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-4.8746
chr17	95160909	95218243	Satellite	MMSAT4	Satellite	chr17MMSAT495216724	NonProperStrand	14	chr15	5068407	5068480	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-8.9991
chr15	98692923	98692968	protein_coding	Mll2	exon	ENSMUSG00000048154	ProperStrand	170	chr8	73115775	73115791	protein_coding	Ell	utr3	ENSMUSG00000070002	NonProperStrand	134	1	-9.6117
chr15	35745422	35745439	protein_coding	Vps13b	intron	ENSMUSG00000037646	NonProperStrand	12	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.6729
chr4	41156403	41160879	protein_coding	Ubap2	utr5	ENSMUSG00000028433	ProperStrand	292	chr11	97642951	97643042	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	20	-20.8802
chr5	111121072	111121195	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	chr17	35089179	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	3	-1.0518
chr3	94302679	94302734	protein_coding	Snx27	utr3	ENSMUSG00000028136	ProperStrand	24	chr18	35716763	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.8034
chr9	15120945	15121035	snoRNA	ENSMUSG00000065265_SNORA32	.	ENSMUSG00000065265	ProperStrand	101	chr5	130300468	130300548	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	5	-8.7458
chr16	20674027	20683512	protein_coding	Eif4g1	exon	ENSMUSG00000045983	ProperStrand	199	chr7	29136543	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-2.3723
chr7	150238947	150248403	protein_coding	Cd81	exon	ENSMUSG00000037706	ProperStrand	88	chr16	23111458	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.7796
chr16	18281454	18281534	protein_coding	Dgcr8	intron	ENSMUSG00000022718	ProperStrand	67	chr5	110676541	110676631	protein_coding	Ankle2	intron	ENSMUSG00000029501	NonProperStrand	4	1	-18.4725
chr16	33020548	33020594	processed_transcript	Gm17106	.	ENSMUSG00000078489	ProperStrand	9	chr11	69481385	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-6.9176
chr16	5256015	5256031	protein_coding	Fam86	utr5	ENSMUSG00000022544	ProperStrand	231	chr10	75502655	75502711	protein_coding	Zfp280b	utr3	ENSMUSG00000049764	ProperStrand	25	1	-12.3821
chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	chr1	162966189	162966228	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-4.1176
chr7	130142486	130142592	protein_coding	Rbbp6	exon	ENSMUSG00000030779	ProperStrand	46	chr1	162965555	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-6.3763
chr17	39980044	39980076	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr12	114402230	114402246	protein_coding	4930427A07Rik	utr3	ENSMUSG00000037466	ProperStrand	8	1	-11.3470
chr3	104627964	104628010	protein_coding	Capza1	exon	ENSMUSG00000070372	ProperStrand	42	chr1	59748798	59748857	snoRNA	ENSMUSG00000077345_Snord70	.	ENSMUSG00000077345	ProperStrand	61	2	-19.2583
chr5	37633613	37633631	protein_coding	Crmp1	exon	ENSMUSG00000029121	ProperStrand	85	chr11	62416950	62416976	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-5.3612
chr7	49331934	49332014	LINE	Lx7	L1	chr7Lx749331951	ProperStrand	1	chr7	49331659	49331749	LTR	RLTR26	ERVK	chr7RLTR2649331327	ProperStrand	1	1	-inf
chr19	46022236	46022252	protein_coding	9130011E15Rik	intron	ENSMUSG00000039901	ProperStrand	129	chr11	77995200	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-4.6931
chr10	79605212	79605259	protein_coding	Atp5d	exon	ENSMUSG00000003072	ProperStrand	44	chr4	85016349	85016365	protein_coding	Sh3gl2	intron	ENSMUSG00000028488	NonProperStrand	313	1	-10.6282
chr7	51194876	51194894	protein_coding	Klk15	exon	ENSMUSG00000055193	NonProperStrand	3	chr14	52829460	52829525	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	3	-inf
chr12	103863874	103863891	protein_coding	Itpk1	intron	ENSMUSG00000057963	ProperStrand	47	chr5	108334195	108334241	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-5.2939
chr18	80403573	80403589	protein_coding	Txnl4a	utr5	ENSMUSG00000057130	ProperStrand	44	chr1	63225284	63225304	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	1	-9.4596
chr7	13619219	13619299	protein_coding	Chmp2a	exon	ENSMUSG00000033916	ProperStrand	17	chr11	97642958	97643048	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.8122
chr7	25659276	25659294	protein_coding	Dmrtc2	exon	ENSMUSG00000011349	ProperStrand	6	chr1	162968446	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-10.8078
chr10	107635932	107635949	protein_coding	Ppp1r12a	exon	ENSMUSG00000019907	ProperStrand	65	chr8	73419658	73419738	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.9868
chr7	127596644	127600572	protein_coding	Abca16	exon	ENSMUSG00000051900	NonProperStrand	4	chr11	6428095	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-8.6824
chr2	28324355	28324372	protein_coding	Mrps2	exon	ENSMUSG00000035772	NonProperStrand	47	chr15	79913300	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.0488
chr1	30860948	30861038	protein_coding	Phf3	exon	ENSMUSG00000048874	ProperStrand	102	chr17	35299565	35299642	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-3.7719
chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	chr2	130102038	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	2	-2.6398
chr9	20756337	20756355	protein_coding	Dnmt1	intron	ENSMUSG00000004099	ProperStrand	91	chr17	35089182	35089232	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-4.6787
chr4	33418876	33418976	protein_coding	Rngtt	intron	ENSMUSG00000028274	ProperStrand	26	chr7	29136543	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	22	-20.3724
chr12	88488443	88496424	protein_coding	Pomt2	exon	ENSMUSG00000034126	NonProperStrand	331	chr5	121655032	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	5	-6.1239
mmu-miR-6240	5	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr4	148530768	148530837	protein_coding	Pgd	exon	ENSMUSG00000028961	ProperStrand	34	3	-15.9076
chr7	13594771	13594787	protein_coding	Zbtb45	intron	ENSMUSG00000049600	ProperStrand	16	chr14	76247753	76247791	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-6.7721
chr4	125842552	125842626	protein_coding	Thrap3	utr3	ENSMUSG00000043962	ProperStrand	84	chr16	23111447	23111487	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.8324
chr12	101759078	101759095	Low_complexity	GC_rich	Low_complexity	chr12GC_rich101758901	ProperStrand	34	chr11	106362640	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-8.5432
chr10	14407184	14407230	protein_coding	Vta1	intron	ENSMUSG00000019868	ProperStrand	12	chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	1	-13.1138
chr2	120872244	120872260	protein_coding	Tgm5	exon	ENSMUSG00000053675	NonProperStrand	163	chr11	48616641	48616694	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	2	-11.7838
chr17	24343586	24343602	protein_coding	Ntn3	exon	ENSMUSG00000079662	ProperStrand	237	chr2	130103751	130103795	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-5.7522
chr17	27559700	27559717	protein_coding	Grm4	utr3	ENSMUSG00000063239	ProperStrand	147	chr4	56910496	56910614	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-4.3705
chr5	65952377	65952395	protein_coding	Ube2k	intron	ENSMUSG00000029203	ProperStrand	289	chr11	69481352	69481432	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-0.7892
chr9	15119666	15119766	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	chr6	97112810	97112856	snoRNA	ENSMUSG00000065728_SNORA36	.	ENSMUSG00000065728	ProperStrand	158	3	-3.5126
chr15	59304992	59305060	protein_coding	Nsmce2	intron	ENSMUSG00000059586	ProperStrand	29	chr7	118219575	118219609	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	3	-13.0463
chr6	143007910	143007930	protein_coding	5730419I09Rik	intron	ENSMUSG00000030279	ProperStrand	81	chr4	131865380	131865440	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-3.4448
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	25283313	25283329	protein_coding	Clcn7	exon	ENSMUSG00000036636	NonProperStrand	34	1	-5.5655
chr1	89303976	89316891	protein_coding	Gigyf2	exon	ENSMUSG00000048000	ProperStrand	128	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-3.4523
chr15	81560306	81560322	protein_coding	Rangap1	utr5	ENSMUSG00000022391	NonProperStrand	35	chr15	79908932	79908956	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-6.5364
chr1	183849466	183849505	protein_coding	Enah	exon	ENSMUSG00000022995	ProperStrand	196	chr17	35299543	35299633	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-2.5997
chr8	24318491	24318507	protein_coding	Agpat6	intron	ENSMUSG00000031545	NonProperStrand	4	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-13.4061
chr5	112865459	112865475	protein_coding	Sez6l	exon	ENSMUSG00000058153	ProperStrand	81	chr15	98350168	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-4.1877
chr16	38369597	38369614	protein_coding	Popdc2	exon	ENSMUSG00000022803	ProperStrand	19	chr9	108869708	108869724	protein_coding	Col7a1	exon	ENSMUSG00000025650	ProperStrand	33	1	-16.7872
chr6	85417045	85417092	protein_coding	Cct7	exon	ENSMUSG00000030007	ProperStrand	173	chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	1	-7.3755
chr11	80965641	80965658	protein_coding	Accn1	exon	ENSMUSG00000020704	NonProperStrand	228	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-6.2749
chr9	42712206	42712224	protein_coding	Grik4	intron	ENSMUSG00000032017	NonProperStrand	14	chr11	69483189	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-8.5983
chr12	109398472	109398522	protein_coding	Setd3	utr5	ENSMUSG00000056770	ProperStrand	21	chr19	8798507	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-11.7618
chr4	140121138	140121154	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	chr8	73419657	73419731	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-1.7517
chr1	155287319	155287354	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	chr11	55296228	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	2	-3.8679
chr8	112457128	112457144	protein_coding	Phlpp2	exon	ENSMUSG00000031732	ProperStrand	2	chr7	36365985	36366051	protein_coding	Rgs9bp	utr3	ENSMUSG00000056043	ProperStrand	12	1	-inf
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr7	26559612	26559628	protein_coding	Axl	exon	ENSMUSG00000002602	NonProperStrand	47	1	-9.2063
chr2	92390369	92390385	LINE	L2c	L2	chr2L2c92390310	NonProperStrand	7	chr17	24857721	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	7	-inf
chr11	97023117	97023188	protein_coding	Kpnb1	utr3	ENSMUSG00000001440	ProperStrand	197	chr6	120950154	120950173	protein_coding	Mical3	intron	ENSMUSG00000051586	ProperStrand	104	1	-9.8244
chr17	57132366	57132405	protein_coding	Clpp	exon	ENSMUSG00000002660	ProperStrand	15	chr5	108336363	108336460	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-7.6413
chr11	68067261	68067277	protein_coding	Ntn1	intron	ENSMUSG00000020902	NonProperStrand	194	chr6	38125053	38125109	protein_coding	D630045J12Rik	intron	ENSMUSG00000063455	ProperStrand	22	1	-12.9936
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr3	87718116	87718426	protein_coding	Hdgf	exon	ENSMUSG00000004897	ProperStrand	117	1	-6.6473
chr12	85663877	85663893	protein_coding	Zfp410	exon	ENSMUSG00000042472	NonProperStrand	1	chr17	24856620	24856720	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-inf
chr7	104686487	104689546	protein_coding	Ints4	exon	ENSMUSG00000025133	ProperStrand	19	chr18	46768053	46768143	protein_coding	Eif1a	utr3	ENSMUSG00000057561	ProperStrand	44	1	-16.2811
chr11	74724864	74726507	protein_coding	Srr	exon	ENSMUSG00000001323	ProperStrand	5	chr11	69483146	69483236	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-7.3324
chr10	94151538	94151628	protein_coding	Ccdc41	utr5	ENSMUSG00000020024	ProperStrand	6	chr4	149616235	149618139	protein_coding	Eno1	exon	ENSMUSG00000063524	ProperStrand	432	1	-14.1157
chr5	139233926	139233942	protein_coding	Fam20c	intron	ENSMUSG00000025854	ProperStrand	3	chr7	116663633	116663712	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-inf
chr19	47890395	47890411	protein_coding	Wdr96	exon	ENSMUSG00000044948	NonProperStrand	11	chr12	110887862	110887895	snoRNA	ENSMUSG00000084549_SNORD113	.	ENSMUSG00000084549	ProperStrand	196	1	-14.4168
chr3	121381031	121381049	protein_coding	4930432M17Rik	intron	ENSMUSG00000074248	NonProperStrand	33	chr16	23110920	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.9284
chr5	108630393	108630409	protein_coding	Ccdc18	exon	ENSMUSG00000056531	ProperStrand	27	chr4	131908382	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.7097
chr13	107737212	107737228	protein_coding	Dimt1	utr5	ENSMUSG00000021692	ProperStrand	185	chr6	91026607	91035857	protein_coding	Nup210	exon	ENSMUSG00000030091	ProperStrand	140	1	-9.3552
chr4	43505656	43505684	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr2	130102081	130102152	protein_coding-noncoding	Nop56	utr5	ENSMUSG00000027405	ProperStrand	19	1	-5.2538
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr16	66842819	66842835	protein_coding	Cadm2	intron	ENSMUSG00000064115	NonProperStrand	21	1	-15.2659
chr8	93457091	93545798	protein_coding	Chd9	exon	ENSMUSG00000056608	ProperStrand	35	chr1	162965984	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-7.6940
chr15	79908955	79908984	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	chr4	132394297	132394342	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	2	-3.1540
chr17	39985043	39985087	pseudogene	AY036118	.	ENSMUSG00000045999	ProperStrand	57	chr7	150717298	150717350	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	NonProperStrand	3	1	-20.1669
chr5	32955357	32955547	protein_coding	Yes1	exon	ENSMUSG00000014932	ProperStrand	11	chr16	23111777	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.0138
chr19	21748079	21748134	protein_coding	Fam108b	intron	ENSMUSG00000047368	NonProperStrand	3	chr16	23111373	23111463	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-12.1275
chr19	36936781	36936814	protein_coding	Tnks2	exon	ENSMUSG00000024811	ProperStrand	133	chr1	89673611	89673711	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	2	-3.4547
chr9	32547059	32547161	protein_coding	Ets1	intron	ENSMUSG00000032035	ProperStrand	5	chr2	158182156	158182208	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	2	-16.2569
chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr3	108357254	108357459	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	3	-1.5387
chr3	126668024	126668040	protein_coding	Ank2	exon	ENSMUSG00000032826	ProperStrand	30	chr8	32260339	32260423	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-5.9845
chr11	86576545	86576562	SINE	B1F2	Alu	chr11B1F286576490	ProperStrand	5	chr18	68011661	68012597	protein_coding	Cep192	exon	ENSMUSG00000024542	ProperStrand	59	2	-19.5552
chr5	72380683	72380700	protein_coding	Gabrb1	intron	ENSMUSG00000029212	ProperStrand	5	chr5	147922399	147922472	protein_coding	Polr1d	exon	ENSMUSG00000029642	ProperStrand	23	1	-18.8987
chr16	18240811	18240901	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	chr10	110918602	110918682	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-0.9391
chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	chr17	39985624	39985724	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	22	-20.7007
chr2	127056269	127056369	protein_coding	Snrnp200	exon	ENSMUSG00000003660	ProperStrand	203	chr16	23111809	23111835	protein_coding	Eif4a2	intron	ENSMUSG00000022884	ProperStrand	356	8	-inf
chr9	63868722	63868739	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	chr7	117189990	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	3	-0.9539
chr1	181027187	181027205	protein_coding	Smyd3	intron	ENSMUSG00000055067	ProperStrand	231	chr17	35089181	35089233	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-2.9530
chr2	144219261	144219277	protein_coding	Csrp2bp	exon	ENSMUSG00000027425	ProperStrand	32	chr2	164717692	164717721	protein_coding	Zfp335	exon	ENSMUSG00000039834	ProperStrand	42	1	-15.2866
chr14	24251850	24251866	protein_coding	Kcnma1	intron	ENSMUSG00000063142	NonProperStrand	104	chr19	9051958	9052094	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	1	-8.3633
chr14	60125816	60125906	protein_coding	Cab39l	intron	ENSMUSG00000021981	ProperStrand	11	chr17	24857773	24857853	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-5.4831
chr1	88426359	88426541	protein_coding	Ptma	exon	ENSMUSG00000026238	ProperStrand	385	chr4	134926614	134927796	protein_coding	A330049M08Rik	exon	ENSMUSG00000043924	ProperStrand	130	1	-8.0436
chr7	143290982	143290999	LTR	ORR1A4	MaLR	chr7ORR1A4143290837	NonProperStrand	1	chr18	75161533	75161596	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-inf
chr17	46758511	46758527	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr17	31986530	31986547	protein_coding	Sik1	exon	ENSMUSG00000024042	ProperStrand	55	1	-9.4054
chr8	72873130	72873220	protein_coding	Upf1	intron	ENSMUSG00000058301	ProperStrand	90	chr7	117189910	117189990	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.6117
chr17	46798799	46798887	protein_coding	Cul7	exon	ENSMUSG00000038545	ProperStrand	38	chr4	131908766	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.9012
chr12	100453312	100453402	protein_coding	Foxn3	intron	ENSMUSG00000033713	ProperStrand	74	chr7	116664795	116664875	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.1951
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr11	62416576	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	3	-4.7102
chr11	69037669	69037685	protein_coding	Gucy2e	exon	ENSMUSG00000020890	NonProperStrand	99	chr17	24838925	24838953	protein_coding	Tbl3	exon	ENSMUSG00000040688	ProperStrand	42	1	-13.0277
chr7	38143791	38143807	protein_coding	Zfp536	intron	ENSMUSG00000043456	NonProperStrand	236	chr3	68889026	68889126	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-1.0703
chr16	8659715	8659743	protein_coding	Carhsp1	utr3	ENSMUSG00000008393	NonProperStrand	4	chr9	71331151	71331189	protein_coding	Polr2m	exon	ENSMUSG00000032199	ProperStrand	83	1	-18.3453
chr16	24984504	24984520	protein_coding	Lpp	utr3	ENSMUSG00000033306	NonProperStrand	189	chr6	115757992	115758092	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-3.3001
chr7	29678421	29678512	protein_coding	Actn4	utr3	ENSMUSG00000054808	ProperStrand	120	chr16	23110939	23110992	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	7	-2.1079
chr12	60098192	60098239	protein_coding	Sec23a	exon	ENSMUSG00000020986	ProperStrand	16	chr16	90221157	90223057	protein_coding	Sod1	exon	ENSMUSG00000022982	ProperStrand	75	2	-inf
chr13	13575936	13576015	protein_coding	Nid1	exon	ENSMUSG00000005397	ProperStrand	112	chr18	35716836	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.2249
chr2	32462887	32462955	protein_coding	St6galnac6	intron	ENSMUSG00000026811	ProperStrand	17	chr11	62416634	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-7.6793
chr2	127354195	127354211	protein_coding	Prom2	utr3	ENSMUSG00000027376	NonProperStrand	10	chr17	24857732	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	6	-20.4235
chr11	97538489	97546421	protein_coding	Mllt6	utr3	ENSMUSG00000038437	ProperStrand	110	chr4	131865861	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	7	-9.5039
chr10	23770362	23770378	protein_coding	Taar7f	exon	ENSMUSG00000060825	NonProperStrand	40	chr9	64022854	64022922	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-8.8391
chr13	11463880	11463970	LTR	ORR1A4	MaLR	chr13ORR1A411463901	NonProperStrand	1	chr4	92152409	92152499	LTR	ORR1A4	MaLR	chr4ORR1A492152240	NonProperStrand	1	1	-inf
chr18	62567495	62567511	protein_coding	Htr4	intron	ENSMUSG00000026322	ProperStrand	18	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-8.2541
chr16	5019432	5019453	protein_coding	Glyr1	exon	ENSMUSG00000022536	ProperStrand	60	chr11	67167096	67167112	protein_coding	Myh13	exon	ENSMUSG00000060180	ProperStrand	145	1	-11.5422
chr4	53015201	53015217	SINE	B1F1	Alu	chr4B1F153015138	ProperStrand	102	chr11	120147650	120147681	protein_coding	Bahcc1	exon	ENSMUSG00000039741	ProperStrand	118	1	-10.8888
chr1	173341933	173341949	protein_coding	Usf1	utr5	ENSMUSG00000026641	NonProperStrand	144	chr10	127521199	127521269	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	1	-7.0496
chr16	55966674	55967183	protein_coding	Rpl24	exon	ENSMUSG00000022601	ProperStrand	149	chr5	108494831	108494927	protein_coding	Mtf2	utr5	ENSMUSG00000029267	ProperStrand	39	1	-12.3568
chr16	23110528	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	chr2	158204005	158204094	snoRNA	ENSMUSG00000065840_SNORA71	.	ENSMUSG00000065840	ProperStrand	107	3	-4.4686
chr9	56048957	56049047	protein_coding	C230081A13Rik	utr3	ENSMUSG00000074305	ProperStrand	40	chr10	39978350	39978430	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-6.2577
chr12	111933379	111933398	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr1	107927360	107927450	protein_coding	Zcchc2	exon	ENSMUSG00000038866	ProperStrand	15	3	-inf
chr4	43505707	43505861	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr7	137769286	137769344	protein_coding	Tacc2	exon	ENSMUSG00000030852	ProperStrand	95	10	-20.1592
chr15	78920310	78920350	protein_coding	Eif3l	exon	ENSMUSG00000033047	ProperStrand	81	chr6	71832550	71832581	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-5.0270
chr1	40057475	40057531	protein_coding	Map4k4	exon	ENSMUSG00000026074	ProperStrand	348	chr4	143985731	143985755	protein_coding	Pramef12	exon	ENSMUSG00000028591	ProperStrand	5	2	-18.7378
chr11	61521402	61521477	protein_coding	Fam83g	utr3	ENSMUSG00000042377	ProperStrand	6	chr16	23111428	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-9.1716
chr3	115954728	115954747	protein_coding	Gpr88	exon	ENSMUSG00000068696	ProperStrand	8	chr11	106362332	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-9.9436
chr12	88778616	88778706	protein_coding	Alkbh1	intron	ENSMUSG00000079036	ProperStrand	70	chr4	131908356	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.2038
chr17	13115664	13115784	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	chr15	34370546	34370641	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	5	-1.0798
chr10	90581115	90581195	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	chr5	108336397	108336487	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	32	-inf
chr10	60783380	60783441	protein_coding	X99384	utr3	ENSMUSG00000020092	ProperStrand	60	chr4	131865855	131865894	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.7679
chr7	109147403	109147441	protein_coding	Numa1	exon	ENSMUSG00000066306	ProperStrand	148	chr2	130103795	130103825	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-6.6760
chr11	75305811	75305870	protein_coding	Prpf8	exon	ENSMUSG00000020850	ProperStrand	255	chr5	74489562	74489652	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-1.3488
chr11	62416575	62416643	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	chr18	75160712	75160777	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	1	-1.5191
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr15	97897281	97906244	protein_coding	Senp1	exon	ENSMUSG00000033075	ProperStrand	24	1	-9.8221
chr11	115041657	115041707	protein_coding	Slc9a3r1	exon	ENSMUSG00000020733	ProperStrand	7	chr9	26817369	26817420	protein_coding	Vps26b	utr3	ENSMUSG00000031988	ProperStrand	9	1	-19.9681
chr13	51743578	51743668	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	chr10	107800748	107800828	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	1	-1.9871
chr12	110899393	110899488	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr11	4923146	4923175	protein_coding	Ap1b1	exon	ENSMUSG00000009090	ProperStrand	43	1	-9.3359
chr8	11245211	11245247	protein_coding	Col4a1	exon	ENSMUSG00000031502	ProperStrand	64	chr19	8799022	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	3	-13.2234
chr9	47608249	47608266	protein_coding	Cadm1	intron	ENSMUSG00000032076	ProperStrand	77	chr7	29136525	29136631	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.9549
chr11	69483136	69483232	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	chr2	85260293	85260315	snoRNA	ENSMUSG00000087973_SNORA48	.	ENSMUSG00000087973	ProperStrand	2	2	-inf
chr11	8418243	8419152	protein_coding	Tns3	exon	ENSMUSG00000020422	ProperStrand	81	chr6	125136609	125136689	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	1	-5.8505
chr13	62333891	62333982	SINE	B2_Mm1a	B2	chr13B2_Mm1a62333907	ProperStrand	1	chr2	73402383	73402463	protein_coding	Chrna1	utr3	ENSMUSG00000027107	NonProperStrand	1	1	-inf
chr6	136765686	136765715	protein_coding	Wbp11	exon	ENSMUSG00000030216	ProperStrand	87	chr11	69481343	69481433	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-2.5448
chr1	78459510	78459562	protein_coding	Farsb	exon	ENSMUSG00000026245	ProperStrand	40	chr3	123210854	123210874	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-4.8201
chr12	110786734	110786782	lincRNA	Meg3	intron	ENSMUSG00000021268	ProperStrand	61	chr11	77996558	77996624	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	5	-18.8456
chr10	127563440	127563459	protein_coding	Baz2a	exon	ENSMUSG00000040054	ProperStrand	274	chr11	6428089	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-0.8446
chr11	6428059	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr2	37255571	37255600	snoRNA	ENSMUSG00000077756_Snord90	.	ENSMUSG00000077756	ProperStrand	167	2	-2.7988
chr8	75071970	75071987	protein_coding	Med26	utr5	ENSMUSG00000045248	ProperStrand	45	chr10	77867804	77867852	protein_coding	Rrp1	exon	ENSMUSG00000061032	ProperStrand	177	1	-11.7235
chr1	59539683	59539700	protein_coding	Fzd7	utr5	ENSMUSG00000041075	ProperStrand	373	chr14	31827478	31827518	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-3.4301
chr5	23008537	23008593	protein_coding	Mll5	exon	ENSMUSG00000029004	ProperStrand	21	chr17	35087896	35087948	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-7.2845
chr9	120037932	120037975	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	chr8	113366286	113366310	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	1	-1.1778
chr10	8532625	8532641	protein_coding	Sash1	intron	ENSMUSG00000015305	NonProperStrand	14	chr10	23505167	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.6795
chr8	31064620	31064710	LINE	Lx7	L1	chr8Lx731064579	ProperStrand	1	chr8	31064444	31064534	SINE	B1_Mm	Alu	chr8B1_Mm31064432	NonProperStrand	1	1	-inf
chr12	33519797	33519819	protein_coding	Nampt	exon	ENSMUSG00000020572	ProperStrand	15	chr19	8963026	8963083	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.8348
chr9	120037993	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	chr2	144091787	144091878	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	ProperStrand	549	5	-6.1288
chr8	30085463	30085482	protein_coding	Unc5d	intron	ENSMUSG00000063626	ProperStrand	22	chr5	116012567	116013388	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	3	-21.0448
chr12	50485931	50485947	protein_coding	Foxg1	exon	ENSMUSG00000020950	NonProperStrand	26	chr3	85448965	85456213	protein_coding	Pet112l	exon	ENSMUSG00000028085	ProperStrand	81	1	-14.4028
chr5	137442027	137442077	protein_coding	Fis1	utr3	ENSMUSG00000019054	ProperStrand	12	chr19	8798484	8798537	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-8.4427
chr5	74489228	74489308	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr6	125112637	125112861	protein_coding	Gapdh	exon	ENSMUSG00000057666	ProperStrand	356	1	-2.3294
chr11	62135309	62135366	protein_coding	Ncor1	intron	ENSMUSG00000018501	ProperStrand	132	chr1	107743297	107743317	protein_coding	Tnfrsf11a	utr3	ENSMUSG00000026321	NonProperStrand	100	1	-10.7041
chr11	23182634	23184249	protein_coding	Xpo1	exon	ENSMUSG00000020290	ProperStrand	123	chr5	108334219	108334254	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-3.4677
chr2	90235340	90235360	LINE	L1Md_F3	L1	chr2L1Md_F390234647	ProperStrand	24	chr3	123210892	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.6860
chr14	61986125	61986215	protein_coding	Kpna3	utr3	ENSMUSG00000021929	ProperStrand	14	chr4	131908361	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.9265
chr2	143780927	143782505	protein_coding	Rrbp1	exon	ENSMUSG00000027422	ProperStrand	76	chr15	79908930	79909020	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-5.0130
chr7	105271218	105271300	protein_coding	Capn5	utr3	ENSMUSG00000035547	ProperStrand	99	chr10	23505168	23505258	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-1.3434
chr1	53353779	53353800	protein_coding	Pms1	utr5	ENSMUSG00000026098	ProperStrand	16	chr4	131908809	131908892	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-5.8984
chr7	136800631	136800649	SINE	RSINE1	B4	chr7RSINE1136800606	ProperStrand	216	chr8	73419657	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-2.1331
chr9	61762194	61762239	protein_coding	Rplp1	utr5	ENSMUSG00000007892	ProperStrand	116	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	1	-5.7275
chr6	148151017	148151042	protein_coding	Ergic2	exon	ENSMUSG00000030304	ProperStrand	10	chr5	115607907	115607986	protein_coding	Mlec	exon	ENSMUSG00000048578	ProperStrand	47	1	-17.7383
chr2	76690968	76691221	protein_coding	Ttn	exon	ENSMUSG00000051747	NonProperStrand	27	chr4	131908809	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-4.3923
chr7	53081423	53082550	protein_coding	Grwd1	exon	ENSMUSG00000053801	ProperStrand	7	chr7	3297398	3297488	protein_coding	Myadm	exon	ENSMUSG00000068566	ProperStrand	31	1	-18.3578
chr1	71675982	71676255	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr7	130572626	130572645	protein_coding	Lcmt1	intron	ENSMUSG00000030763	ProperStrand	18	1	-10.2680
chr5	130295419	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	chr18	74938205	74938335	snoRNA	ENSMUSG00000089235_SCARNA17	.	ENSMUSG00000089235	ProperStrand	1128	5	-4.0823
chr14	31827511	31827544	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	chr4	41158542	41158607	snoRNA	ENSMUSG00000089308_SNORD121A	.	ENSMUSG00000089308	ProperStrand	209	1	-4.5104
chr12	17552962	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr7	51505517	51505591	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	1	-1.1770
chr19	8800380	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	NonProperStrand	18	chr16	23111704	23111826	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	NonProperStrand	47	2	-inf
chr16	13416400	13416456	protein_coding	Mkl2	utr3	ENSMUSG00000009569	NonProperStrand	6	chr2	26494708	26494759	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-12.5732
chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr9	64024952	64024998	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	2	-0.8102
chr17	86629471	86629493	protein_coding	Prkce	intron	ENSMUSG00000045038	NonProperStrand	24	chr4	131908688	131908748	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.6746
chr15	82984880	82984970	protein_coding	Cyb5r3	utr3	ENSMUSG00000018042	ProperStrand	22	chr7	116663649	116663729	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.3535
chr5	100855902	100855960	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr19	8814596	8814619	protein_coding	Wdr74	exon	ENSMUSG00000042729	ProperStrand	15	4	-23.0143
chr11	97643057	97643136	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	chr8	113362429	113362462	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	1	-3.9213
chr18	82662186	82662202	protein_coding	Mbp	intron	ENSMUSG00000041607	NonProperStrand	185	chr14	76247711	76247791	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-3.8647
chr11	6129070	6129086	protein_coding	Npc1l1	exon	ENSMUSG00000020447	NonProperStrand	1	chrX	84483704	84483752	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-inf
chr6	113533413	113533462	protein_coding	Fancd2	exon	ENSMUSG00000034023	ProperStrand	65	chr14	77424372	77424388	protein_coding	9030625A04Rik	utr3	ENSMUSG00000044350	NonProperStrand	152	1	-11.2868
chr7	139833256	139834171	protein_coding	Lhpp	exon	ENSMUSG00000030946	ProperStrand	35	chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	1	-11.7067
chr3	89851728	89851771	protein_coding	Ubap2l	exon	ENSMUSG00000042520	ProperStrand	88	chr3	123210854	123210886	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.4749
chr14	76906693	76906793	protein_coding	Tsc22d1	utr3	ENSMUSG00000022010	ProperStrand	86	chr19	8963027	8963083	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.6982
chr18	21054478	21054494	protein_coding	Trappc8	exon	ENSMUSG00000033382	ProperStrand	43	chr4	57706987	57707003	protein_coding	Palm2	intron	ENSMUSG00000090053	NonProperStrand	187	1	-11.7056
chr14	76247066	76247156	protein_coding	Tpt1	exon	ENSMUSG00000060126	ProperStrand	236	chr4	131865413	131865493	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-1.6363
chr11	68887039	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	chr5	135529900	135529972	snoRNA	ENSMUSG00000088008_SCARNA20	.	ENSMUSG00000088008	ProperStrand	139	1	-2.6174
chr16	23110454	23110526	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	chr8	34802319	34802409	snoRNA	ENSMUSG00000088856_SNORA48	.	ENSMUSG00000088856	ProperStrand	236	3	-2.0686
chr8	108233712	108233729	protein_coding	4933405L10Rik	exon	ENSMUSG00000013158	ProperStrand	94	chr9	15119710	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.8844
chr13	107697816	107697906	protein_coding	Ipo11	intron	ENSMUSG00000042590	ProperStrand	120	chr12	110887832	110887893	snoRNA	ENSMUSG00000084549_SNORD113	.	ENSMUSG00000084549	ProperStrand	196	1	-9.5482
chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	chr17	35089181	35089229	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	2	-3.3341
chr12	60141367	60141457	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	chr16	43886851	43886929	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	12	-20.2837
chr1	88247453	88247495	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chr6	29119929	29119945	protein_coding	Prrt4	exon	ENSMUSG00000079654	NonProperStrand	18	1	-9.7884
chr6	49238009	49238039	LTR	MTC	MaLR	chr6MTC49237870	ProperStrand	1	chr9	15119310	15119426	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-inf
chr8	87830124	87830214	protein_coding	Orc6	exon	ENSMUSG00000031697	ProperStrand	23	chr11	6428037	6428117	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.0081
chr17	13135978	13136068	protein_coding	Acat2	utr3	ENSMUSG00000023832	ProperStrand	8	chr4	131865943	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.4974
chr19	46451424	46451449	protein_coding	Actr1a	utr3	ENSMUSG00000025228	ProperStrand	27	chr4	131908810	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.4692
chr9	72596601	72596621	protein_coding	Nedd4	utr3	ENSMUSG00000032216	ProperStrand	308	chr11	6428035	6428160	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-0.7144
chr13	58279038	58279115	protein_coding	Ubqln1	utr3	ENSMUSG00000005312	ProperStrand	49	chr11	4971530	4971580	protein_coding	Ewsr1	exon	ENSMUSG00000009079	ProperStrand	248	4	-20.1634
chr7	19527693	19527757	protein_coding	Nova2	intron	ENSMUSG00000030411	ProperStrand	23	chr11	121569212	121569228	protein_coding	Metrnl	exon	ENSMUSG00000039208	NonProperStrand	11	1	-18.6114
chr8	73286882	73287059	protein_coding	Ifi30	exon	ENSMUSG00000031838	ProperStrand	40	chr10	23505186	23505266	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	17	-inf
chr2	32528783	32528863	protein_coding	Eng	exon	ENSMUSG00000026814	ProperStrand	29	chr3	123210858	123210948	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.3336
chr8	50518236	50518326	protein_coding	4930555F03Rik	intron	ENSMUSG00000031559	NonProperStrand	2	chr8	50513429	50513519	protein_coding	4930555F03Rik	intron	ENSMUSG00000031559	ProperStrand	2	1	-inf
chr3	100876906	100876996	protein_coding	Ptgfrn	exon	ENSMUSG00000027864	ProperStrand	67	chr13	49779711	49779791	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-6.7944
chr17	32453268	32453285	protein_coding	Akap8	exon	ENSMUSG00000024045	ProperStrand	339	chr18	74938045	74938145	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	ProperStrand	1022	2	-7.1156
chr2	31536754	31536808	protein_coding	Exosc2	utr3	ENSMUSG00000039356	ProperStrand	39	chr4	131908236	131908291	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.0833
chr17	33088738	33088755	pseudogene	Cyp4f41-ps	.	ENSMUSG00000024295	NonProperStrand	9	chrX	58225380	58225396	pseudogene	Rpl7l1-ps1	.	ENSMUSG00000081323	ProperStrand	46	1	-17.8490
chr5	143722373	143722722	protein_coding	Fscn1	exon	ENSMUSG00000029581	ProperStrand	200	chr18	35714218	35714292	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-1.4349
chr4	35656315	35656332	protein_coding	Lingo2	exon	ENSMUSG00000045083	ProperStrand	17	chr4	131865855	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.9909
chr10	5314773	5316120	protein_coding	Syne1	exon	ENSMUSG00000019769	ProperStrand	49	chr11	77996560	77996623	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	5	-22.4112
chr11	62590608	62590630	snoRNA	ENSMUSG00000064692_SNORA67	.	ENSMUSG00000064692	ProperStrand	185	chr19	8963064	8963181	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-0.6940
chr12	60168098	60168837	protein_coding	Pnn	exon	ENSMUSG00000020994	ProperStrand	42	chr17	35299521	35299621	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	7	-19.5777
chr13	51777870	51777886	protein_coding	Secisbp2	exon	ENSMUSG00000035139	ProperStrand	19	chr11	69483212	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.5692
chr19	5796430	5796488	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr14	121865094	121865111	protein_coding	Slc15a1	intron	ENSMUSG00000025557	ProperStrand	14	1	-10.4957
chr7	152118581	152118597	protein_coding	Ccnd1	exon	ENSMUSG00000070348	ProperStrand	93	chr17	35087896	35087942	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-4.3574
chr6	129483367	129483398	protein_coding	Gabarapl1	utr5	ENSMUSG00000030161	ProperStrand	9	chr18	35716763	35716853	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-18.5284
chr15	5068442	5068478	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	chr8	113366300	113366354	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	4	-8.2208
chr11	105175010	105175030	protein_coding	Mrc2	intron	ENSMUSG00000020695	ProperStrand	12	chr12	102305511	102305612	protein_coding	Smek1	intron	ENSMUSG00000041846	NonProperStrand	6	1	-19.9654
chr2	119603937	119603977	protein_coding	Rpap1	exon	ENSMUSG00000034032	ProperStrand	96	chr17	13112531	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	2	-6.2479
chr10	17443077	17443095	protein_coding	Cited2	utr5	ENSMUSG00000039910	ProperStrand	64	chr5	34839389	34839436	protein_coding	Tnip2	exon	ENSMUSG00000059866	ProperStrand	3	1	-21.3930
chr3	131270313	131270413	protein_coding	Papss1	exon	ENSMUSG00000028032	ProperStrand	11	chr2	130101259	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	7	-20.3647
chr9	78023185	78023244	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr4	41158543	41158590	snoRNA	ENSMUSG00000089308_SNORD121A	.	ENSMUSG00000089308	ProperStrand	209	1	-3.4961
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr3	84995363	84995380	protein_coding	Arfip1	intron	ENSMUSG00000074513	NonProperStrand	56	2	-7.6340
chr9	40611261	40611331	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr9	69972993	69973998	protein_coding	Fam81a	exon	ENSMUSG00000032224	ProperStrand	59	1	-8.1726
chr18	75161746	75162364	protein_coding	Rpl17	exon	ENSMUSG00000062328	ProperStrand	90	chr6	125136437	125136527	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	1	-5.6443
chr16	64851346	64851368	Simple_repeat	(CCG)n	Simple_repeat	chr16(CCG)n64851329	NonProperStrand	15	chr4	131908809	131908893	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.5353
chr15	94411382	94411433	protein_coding	Twf1	exon	ENSMUSG00000022451	ProperStrand	32	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-8.2414
chr12	8759078	8759107	protein_coding	Pum2	utr3	ENSMUSG00000020594	ProperStrand	39	chr5	150040563	150040619	tRNA	tRNA1043-AsnGTT	.	713338	ProperStrand	8	1	-17.6839
chr7	99886560	99886578	lincRNA	4632427E13Rik	exon	ENSMUSG00000074024	NonProperStrand	1	chr4	131908688	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-inf
chr13	9833572	9833621	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr6	83051783	83051801	protein_coding	Ccdc142	exon	ENSMUSG00000079511	NonProperStrand	2	1	-12.3538
chr4	151368477	151368495	protein_coding	Phf13	intron	ENSMUSG00000047777	ProperStrand	38	chr1	88252851	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-7.5508
chr4	41142819	41142874	protein_coding	Ubap2	exon	ENSMUSG00000028433	ProperStrand	292	chr6	121423179	121423195	protein_coding	Iqsec3	utr5	ENSMUSG00000040797	NonProperStrand	139	1	-8.4598
chr9	78023109	78023192	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr11	69495336	69495368	protein_coding	Senp3	utr5	ENSMUSG00000005204	ProperStrand	65	2	-9.3360
chr1	155287297	155287353	snoRNA	ENSMUSG00000064435_SNORA4	.	ENSMUSG00000064435	ProperStrand	263	chr8	129468746	129468797	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	4	-7.0204
chr4	147988651	147988668	protein_coding	Tardbp	utr3	ENSMUSG00000041459	ProperStrand	120	chr1	162965531	162965588	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.0777
chr11	116165245	116165266	protein_coding	Exoc7	intron	ENSMUSG00000020792	ProperStrand	24	chr18	61863190	61863232	protein_coding	Pcyox1l	exon	ENSMUSG00000024579	ProperStrand	15	1	-18.2518
chr5	42662802	42662820	SINE	B4A	B4	chr5B4A42662752	ProperStrand	1	chr9	120038474	120038529	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-inf
chr9	114421519	114421548	protein_coding	Trim71	utr3	ENSMUSG00000079259	ProperStrand	162	chr9	64024951	64024998	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	1	-7.1615
chr18	35106261	35107603	protein_coding	Hspa9	exon	ENSMUSG00000024359	ProperStrand	166	chr11	69483157	69483237	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-0.9352
chr19	44380481	44380563	protein_coding	Scd2	utr3	ENSMUSG00000025203	ProperStrand	219	chr6	125064017	125064107	protein_coding	Chd4	exon	ENSMUSG00000063870	ProperStrand	303	1	-7.4826
chr4	117353896	117353966	protein_coding	Dmap1	exon	ENSMUSG00000009640	ProperStrand	4	chr9	114421997	114422033	protein_coding	Trim71	exon	ENSMUSG00000079259	ProperStrand	162	3	-20.5983
chr10	6063958	6063978	protein_coding	Akap12	intron	ENSMUSG00000038587	ProperStrand	1008	chr1	120355732	120355752	snRNA	ENSMUSG00000080542_U4atac	.	ENSMUSG00000080542	ProperStrand	73	1	-7.2849
chr9	120038552	120038607	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	chr12	110918156	110918221	snoRNA	ENSMUSG00000065749_AF357428	.	ENSMUSG00000065749	ProperStrand	218	3	-3.2345
chr12	92880305	92880331	protein_coding	Ston2	exon	ENSMUSG00000020961	ProperStrand	9	chr14	61665103	61665119	protein_coding	Tnfrsf19	utr5	ENSMUSG00000060548	NonProperStrand	2	1	-inf
chr19	46143789	46143806	protein_coding	Pprc1	exon	ENSMUSG00000055491	ProperStrand	143	chr11	97642997	97643079	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-3.5382
chr11	102916591	102917751	protein_coding	Nmt1	exon	ENSMUSG00000020936	ProperStrand	43	chr17	27234955	27235045	protein_coding	Itpr3	exon	ENSMUSG00000042644	ProperStrand	137	1	-12.3288
chr9	110842809	110843206	protein_coding	Tdgf1	utr3	ENSMUSG00000032494	ProperStrand	218	chr10	110918547	110918661	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	4	-5.6004
chr11	83307483	83307515	protein_coding	Taf15	intron	ENSMUSG00000020680	ProperStrand	60	chr14	96988079	96988179	snoRNA	ENSMUSG00000064581_SNORA30	.	ENSMUSG00000064581	ProperStrand	146	1	-11.5287
chr12	84040062	84040078	protein_coding	Rgs6	intron	ENSMUSG00000021219	NonProperStrand	65	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-7.5798
chr3	107131438	107131461	protein_coding	Rbm15	intron	ENSMUSG00000048109	ProperStrand	82	chr7	116664811	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	4	-7.7075
chr15	82725593	82725636	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	chr17	24665458	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	2	-1.8277
chr15	8301303	8301321	protein_coding	Nipbl	exon	ENSMUSG00000022141	NonProperStrand	5	chr2	26494714	26494794	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-8.0805
chr15	60661083	60661099	lincRNA	9930014A18Rik	exon	ENSMUSG00000044513	ProperStrand	54	chr18	35714145	35714235	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-6.1739
chr1	134391491	134392812	protein_coding	Rbbp5	exon	ENSMUSG00000026439	ProperStrand	22	chr7	116663638	116663718	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.3535
chr2	90235286	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	84426052	84426069	protein_coding	Ric8b	intron	ENSMUSG00000035620	NonProperStrand	14	1	-7.3487
chr6	37865243	37865279	protein_coding	Trim24	exon	ENSMUSG00000029833	ProperStrand	27	chr6	131330290	131330340	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	ProperStrand	408	4	-inf
chr6	115758009	115758099	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr13	90238641	90238721	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	1	-1.3562
chr4	133096583	133096674	protein_coding	Nudc	intron	ENSMUSG00000028851	ProperStrand	80	chr9	21009772	21009852	protein_coding	Pde4a	exon	ENSMUSG00000032177	NonProperStrand	2	1	-inf
chr9	114658080	114658162	protein_coding	Cmtm6	utr3	ENSMUSG00000032434	ProperStrand	24	chr10	82456766	82456784	protein_coding	Chst11	intron	ENSMUSG00000034612	ProperStrand	170	1	-13.0798
chr19	6307588	6307668	protein_coding	Cdc42bpg	intron	ENSMUSG00000024769	ProperStrand	90	chr8	73419663	73419753	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	8	-inf
chr11	119967287	119967754	protein_coding	Slc38a10	exon	ENSMUSG00000061306	ProperStrand	91	chr11	69481387	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	3	-6.5217
chr7	120042330	120042350	protein_coding	Tead1	utr3	ENSMUSG00000055320	ProperStrand	217	chr10	39978350	39978485	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-3.0405
chr4	136101494	136101568	protein_coding	Luzp1	utr3	ENSMUSG00000001089	ProperStrand	35	chrX	103905592	103905608	protein_coding	Gm5127	utr3	ENSMUSG00000073010	NonProperStrand	6	1	-18.4708
chr1	74902715	74902731	protein_coding	Cdk5r2	exon	ENSMUSG00000090071	NonProperStrand	49	chr15	79908967	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-5.8699
chr12	96885563	96885653	LINE	L1Md_T	L1	chr12L1Md_T96885572	ProperStrand	1	chr14	34780582	34780662	protein_coding	Zfp488	utr3	ENSMUSG00000044519	ProperStrand	54	1	-inf
chr16	17911307	17911397	protein_coding	Dgcr14	exon	ENSMUSG00000003527	ProperStrand	5	chr18	33954863	33954943	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-8.5187
chr8	109172909	109172974	protein_coding	Cdh1	exon	ENSMUSG00000000303	ProperStrand	283	chr1	137345619	137346480	protein_coding	Nav1	exon	ENSMUSG00000009418	NonProperStrand	60	1	-10.2044
chr2	84899334	84899425	protein_coding	Tnks1bp1	exon	ENSMUSG00000033955	ProperStrand	23	chr8	73419657	73419715	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	8	-20.4469
chr4	116827160	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	chr9	15118535	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	1	-3.2352
chr1	174002275	174002375	protein_coding	Ncstn	exon	ENSMUSG00000003458	ProperStrand	20	chr18	75160712	75160777	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	1	-11.4129
chr11	79762415	79762431	protein_coding	Utp6	exon	ENSMUSG00000035575	ProperStrand	28	chr16	23110840	23110860	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.1386
chr1	84762627	84762739	protein_coding	Trip12	exon	ENSMUSG00000026219	ProperStrand	248	chr5	141090405	141090422	protein_coding	Lfng	exon	ENSMUSG00000029570	NonProperStrand	92	1	-9.6101
chr13	55705873	55705973	protein_coding	B4galt7	intron	ENSMUSG00000021504	ProperStrand	6	chr1	162965997	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-8.2222
chr9	72584529	72584570	protein_coding	Nedd4	exon	ENSMUSG00000032216	ProperStrand	308	chr10	23505390	23505435	protein_coding	Rps12	exon	ENSMUSG00000061983	ProperStrand	309	1	-6.7697
chr7	112786765	112787546	protein_coding	Arfip2	exon	ENSMUSG00000030881	ProperStrand	191	chr12	88778631	88778652	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-4.2515
chr11	6523906	6523922	protein_coding	Tbrg4	exon	ENSMUSG00000000384	NonProperStrand	56	chr14	32069334	32069394	protein_coding	Bap1	exon	ENSMUSG00000021901	ProperStrand	12	1	-16.7620
chr11	56254863	56254882	LINE	Lx9	L1	chr11Lx956254364	ProperStrand	1	chr4	76614453	76614470	protein_coding	Ptprd	intron	ENSMUSG00000028399	ProperStrand	198	1	-inf
chr9	103238214	103238268	protein_coding	Topbp1	exon	ENSMUSG00000032555	ProperStrand	81	chr12	17552971	17553071	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	7	-20.5927
chr1	77370219	77370268	protein_coding	Epha4	utr3	ENSMUSG00000026235	ProperStrand	57	chr2	160717940	160717961	protein_coding	Lpin3	exon	ENSMUSG00000027412	ProperStrand	31	1	-14.7405
chrX	141318067	141318083	protein_coding	Zcchc16	intron	ENSMUSG00000071679	ProperStrand	7	chr16	23111758	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.9463
chr2	162909017	162909084	protein_coding	Mybl2	utr3	ENSMUSG00000017861	ProperStrand	230	chr4	41158541	41158607	snoRNA	ENSMUSG00000089308_SNORD121A	.	ENSMUSG00000089308	ProperStrand	209	5	-19.8303
chr19	60851671	60852531	protein_coding	Eif3a	exon	ENSMUSG00000024991	ProperStrand	287	chr19	9051819	9051899	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	1	-6.3524
chr11	79504033	79504072	protein_coding	Rab11fip4	utr3	ENSMUSG00000017639	ProperStrand	30	chr16	23110964	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0481
chr11	95529368	95529437	protein_coding	Phb	utr5	ENSMUSG00000038845	ProperStrand	126	chr2	89368463	89368480	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	2	-14.0700
chr2	121127932	121128022	protein_coding	Mtap1a	exon	ENSMUSG00000027254	ProperStrand	17	chr5	74489595	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-6.2343
chr4	150538028	150538044	protein_coding	Camta1	exon	ENSMUSG00000014592	ProperStrand	170	chr4	57248160	57248187	protein_coding	Ptpn3	exon	ENSMUSG00000038764	ProperStrand	48	2	-17.9964
chr11	50122384	50122429	protein_coding	Canx	exon	ENSMUSG00000020368	ProperStrand	296	chr5	108336363	108336411	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	3	-5.4899
chr15	80934689	80934787	protein_coding	Mkl1	intron	ENSMUSG00000042292	ProperStrand	57	chr11	69483136	69483192	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-4.4716
chr11	101321105	101321185	protein_coding	Vat1	utr3	ENSMUSG00000034993	ProperStrand	69	chr4	88366812	88366902	protein_coding	Klhl9	exon	ENSMUSG00000070923	ProperStrand	7	1	-17.5140
chr3	107135762	107135852	protein_coding	Rbm15	exon	ENSMUSG00000048109	ProperStrand	82	chr11	69481337	69481417	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-2.6469
chr1	190267301	190267317	protein_coding	Ush2a	exon	ENSMUSG00000026609	NonProperStrand	60	chr16	23110526	23110577	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.4617
chr4	131908421	131908461	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr2	158184092	158184201	snoRNA	ENSMUSG00000064995_SNORA71	.	ENSMUSG00000064995	ProperStrand	430	4	-11.5059
chr4	134454157	134454210	protein_coding	Tmem50a	utr3	ENSMUSG00000028822	ProperStrand	8	chr1	192712615	192712631	protein_coding	Rps6kc1	exon	ENSMUSG00000089872	ProperStrand	241	1	-14.6624
chr9	104025465	104026409	protein_coding	Acad11	utr3	ENSMUSG00000090150	ProperStrand	17	chr17	24857725	24857805	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.6133
chr12	55796767	55796784	protein_coding	Eapp	utr5	ENSMUSG00000054302	NonProperStrand	62	chr15	34370618	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-3.4888
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr1	162965548	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	4	-1.9536
chr6	39675178	39675269	protein_coding	Braf	exon	ENSMUSG00000002413	ProperStrand	7	chr8	98269982	98270062	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-9.9218
chr12	33639092	33639165	protein_coding	Sypl	utr5	ENSMUSG00000020570	ProperStrand	18	chr8	97374230	97374247	protein_coding	Coq9	intron	ENSMUSG00000031782	NonProperStrand	11	1	-18.4766
chr1	134535665	134535772	protein_coding	Nfasc	intron	ENSMUSG00000026442	ProperStrand	25	chr17	13112531	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	2	-10.2432
chr11	116535934	116535981	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr17	35647420	35647453	protein_coding	Pou5f1	exon	ENSMUSG00000024406	ProperStrand	104	2	-7.9948
chr9	120040280	120040597	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	chr19	8800085	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	4	-12.7270
chr16	29625652	29625669	protein_coding	Opa1	exon	ENSMUSG00000038084	ProperStrand	33	chr17	39985264	39985290	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-7.1193
chr19	9047394	9047426	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	chr8	112363233	112363275	snoRNA	ENSMUSG00000077549_Snord71	.	ENSMUSG00000077549	ProperStrand	196	1	-7.1041
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr5	130300419	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	18	-8.2211
chr5	31375974	31376379	protein_coding	Cad	exon	ENSMUSG00000013629	ProperStrand	260	chr15	79913287	79913343	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-1.1845
chr3	97817679	97851652	protein_coding	Notch2	exon	ENSMUSG00000027878	ProperStrand	86	chr6	115758029	115758119	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-4.7741
chr10	76515266	76515366	protein_coding	Col18a1	utr3	ENSMUSG00000001435	ProperStrand	287	chr6	48410411	48410428	protein_coding	Sspo	exon	ENSMUSG00000029797	NonProperStrand	94	5	-19.0610
chr17	71598819	71598836	protein_coding	Lpin2	utr3	ENSMUSG00000024052	ProperStrand	18	chr11	69482351	69482387	snoRNA	ENSMUSG00000089542_snoU6-77	.	ENSMUSG00000089542	ProperStrand	138	1	-14.0876
chr1	55294252	55294269	protein_coding	Mars2	exon	ENSMUSG00000046994	ProperStrand	3	chr1	162966812	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-12.5998
chr12	112353192	112353253	protein_coding	Rcor1	utr3	ENSMUSG00000037896	ProperStrand	20	chr16	23110545	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	5	-18.1763
chrX	19683228	19683244	protein_coding	Slc9a7	exon	ENSMUSG00000037341	NonProperStrand	136	chr2	63936034	63936053	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-6.2387
chr8	98264155	98264247	protein_coding	Cnot1	intron	ENSMUSG00000036550	ProperStrand	315	chr16	23111697	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	8	-4.5215
chr10	60915301	60915338	protein_coding	Eif4ebp2	utr5	ENSMUSG00000020091	ProperStrand	39	chr2	118659935	118660037	protein_coding	D2Ertd750e	utr3	ENSMUSG00000027331	ProperStrand	26	10	-19.0642
chr2	166829758	166829848	SINE	B3A	B2	chr2B3A166829641	ProperStrand	1	chr2	166829997	166830077	SINE	ID_B1	B4	chr2ID_B1166829845	ProperStrand	1	1	-inf
chr2	52995592	53000995	protein_coding	Prpf40a	exon	ENSMUSG00000061136	ProperStrand	129	chr4	131908753	131908896	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-1.5890
chr1	162151031	162151088	protein_coding	Rabgap1l	utr3	ENSMUSG00000026721	ProperStrand	44	chr19	46951716	46951734	protein_coding	Cnnm2	exon	ENSMUSG00000064105	NonProperStrand	19	1	-16.2866
chr9	54802694	54802731	protein_coding	Psma4	exon	ENSMUSG00000032301	ProperStrand	14	chr7	148634702	148634792	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-11.1300
chr8	119932452	119932470	protein_coding	4933407C03Rik	intron	ENSMUSG00000034390	NonProperStrand	32	chr9	78327112	78327183	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-7.5874
chr3	107424949	107424967	protein_coding	Fam40a	exon	ENSMUSG00000014601	ProperStrand	18	chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-10.1739
chr5	121655054	121655154	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	chr9	15130909	15130986	snoRNA	ENSMUSG00000077394_snoU2_19	.	ENSMUSG00000077394	ProperStrand	96	1	-2.8934
chr7	134022457	134022547	protein_coding	Taok2	exon	ENSMUSG00000059981	ProperStrand	47	chr16	23110452	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-5.0210
chr2	164716756	164716793	protein_coding	Pcif1	utr3	ENSMUSG00000039849	ProperStrand	22	chr5	121655017	121655039	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.6854
chr1	63202878	63203743	protein_coding	Ndufs1	exon	ENSMUSG00000025968	ProperStrand	14	chr3	123210907	123210933	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-11.4870
chr12	113033775	113033814	protein_coding	Klc1	exon	ENSMUSG00000021288	ProperStrand	35	chr17	24857722	24857812	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	6	-17.4543
chr8	85917143	85917205	protein_coding	Clgn	intron	ENSMUSG00000002190	ProperStrand	6	chr2	25439180	25439280	protein_coding	B230208H17Rik	utr3	ENSMUSG00000015087	ProperStrand	25	1	-18.9810
chr1	10056632	10056653	protein_coding	Cspp1	exon	ENSMUSG00000056763	ProperStrand	37	chr2	26494778	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.0004
chr8	13014869	13014885	protein_coding	Mcf2l	exon	ENSMUSG00000031442	NonProperStrand	35	chr9	121818602	121818618	protein_coding	Ccbp2	utr3	ENSMUSG00000044534	NonProperStrand	1	1	-inf
chr4	147475493	147475509	protein_coding	2610109H07Rik	utr3	ENSMUSG00000029005	NonProperStrand	46	chr4	131865867	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.1947
chr6	31478607	31478697	protein_coding	Podxl	exon	ENSMUSG00000025608	ProperStrand	37	chr4	131865408	131865488	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-4.9277
chr10	4919942	4920032	protein_coding	Syne1	intron	ENSMUSG00000019769	ProperStrand	49	chr5	121655052	121655132	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.1280
chr8	75013781	75013845	protein_coding	Slc35e1	intron	ENSMUSG00000019731	ProperStrand	23	chr2	158185529	158185585	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-8.4080
chr2	152221616	152221716	protein_coding	Sox12	utr3	ENSMUSG00000051817	ProperStrand	31	chr7	52382236	52382290	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-9.6128
chr11	35622736	35622763	protein_coding	Rars	exon	ENSMUSG00000018848	ProperStrand	18	chr9	59519523	59519818	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	1	-9.6082
mmu-miR-1912-5p	0	17	miRNA	mmu-miR-1912-5p	.	mmu-miR-1912-5p	NonProperStrand	36	chr18	35714144	35714267	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-7.3570
chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	chr2	158451026	158451043	protein_coding	Actr5	exon	ENSMUSG00000037761	NonProperStrand	94	1	-8.8574
chr1	53246341	53249032	protein_coding	Pms1	exon	ENSMUSG00000026098	ProperStrand	16	chr18	74938046	74938122	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	ProperStrand	1022	1	-10.3242
chr8	113366285	113366317	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	chr16	43886849	43886928	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	3	-9.7922
chr13	24796891	24796908	protein_coding	Fam65b	utr3	ENSMUSG00000036006	NonProperStrand	8	chr9	120039567	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	4	-19.4676
chr18	76510376	76510397	LTR	RMER15	ERVL	chr18RMER1576510125	ProperStrand	1	chr16	11144141	11144231	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	1	-inf
chr15	58577335	58577351	protein_coding	Fer1l6	intron	ENSMUSG00000037106	ProperStrand	54	chr18	35716793	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.3452
chr18	35403767	35404387	protein_coding	Ctnna1	exon	ENSMUSG00000037815	ProperStrand	115	chr3	153991597	153991614	protein_coding	Lhx8	utr5	ENSMUSG00000093486	NonProperStrand	47	1	-12.5005
chr12	3968611	3968627	protein_coding	Efr3b	exon	ENSMUSG00000020658	ProperStrand	142	chr2	130101258	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-4.9070
chr4	139029058	139029129	protein_coding	Ubr4	exon	ENSMUSG00000066036	ProperStrand	304	chr6	54437968	54438001	protein_coding	Wipf3	exon	ENSMUSG00000086040	ProperStrand	4	2	-inf
chr14	103560081	103560113	protein_coding	Mycbp2	intron	ENSMUSG00000033004	ProperStrand	129	chr11	97642952	97643090	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	4	-5.5025
chr11	60245925	60249858	protein_coding	4933439F18Rik	exon	ENSMUSG00000018415	ProperStrand	26	chr2	22973229	22973275	protein_coding	Mastl	utr3	ENSMUSG00000026779	ProperStrand	60	1	-15.0063
chr2	88835572	88835662	LINE	L1Md_F2	L1	chr2L1Md_F288835263	NonProperStrand	1	chr9	20420840	20420930	antisense	5730577I03Rik	.	ENSMUSG00000062470	NonProperStrand	1	1	-inf
chr11	51464192	51464208	protein_coding	N4bp3	utr5	ENSMUSG00000001053	NonProperStrand	41	chr4	131908718	131908808	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.7814
chr5	115940330	115940406	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	chr9	15119969	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	3	-7.3764
chr8	91554090	91554180	protein_coding	Sall1	exon	ENSMUSG00000031665	ProperStrand	96	chr2	130101991	130102071	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-4.4503
chr16	64926224	64926240	protein_coding	Htr1f	exon	ENSMUSG00000050783	NonProperStrand	10	chr1	162966009	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-7.1350
chr7	52165178	52171280	protein_coding	Ap2a1	exon	ENSMUSG00000060279	ProperStrand	193	chr15	34370550	34370630	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-1.5717
chr17	30991894	30992872	protein_coding	Dnahc8	exon	ENSMUSG00000033826	ProperStrand	246	chr9	103401280	103401296	protein_coding	Tmem108	exon	ENSMUSG00000042757	NonProperStrand	323	1	-7.1260
chr5	45916523	45916546	protein_coding	Med28	exon	ENSMUSG00000015804	ProperStrand	50	chr10	23505148	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.4914
chr10	60384291	60384381	Simple_repeat	(GA)n	Simple_repeat	chr10(GA)n60384257	NonProperStrand	1	chr5	108336937	108337017	protein_coding	Rpl5	utr3	ENSMUSG00000058558	ProperStrand	235	1	-inf
chr2	157135992	157138276	protein_coding	Rpn2	exon	ENSMUSG00000027642	ProperStrand	363	chr19	46901650	46901699	protein_coding	Cnnm2	intron	ENSMUSG00000064105	ProperStrand	18	1	-12.1496
chr7	54181659	54181690	protein_coding	Uevld	utr3	ENSMUSG00000043262	ProperStrand	23	chr19	39917317	39917333	protein_coding	Cyp2c69	utr3	ENSMUSG00000092008	NonProperStrand	83	1	-14.5981
chr5	42136455	42136473	Low_complexity	GA-rich	Low_complexity	chr5GA-rich42136449	NonProperStrand	106	chr11	87172190	87172206	protein_coding	Ppm1e	exon	ENSMUSG00000046442	ProperStrand	112	1	-10.9166
chrX	7611337	7611357	pseudogene	Gm9429	.	ENSMUSG00000083518	ProperStrand	1	chr18	35714189	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-inf
chr2	26493487	26493518	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr9	15119971	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	3	-2.9932
chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr11	95541195	95541273	protein_coding	Phb	utr3	ENSMUSG00000038845	ProperStrand	126	1	-5.0034
chr6	71791341	71791387	protein_coding	Immt	intron	ENSMUSG00000052337	ProperStrand	48	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.6010
chr2	90235293	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr12	35015748	35015765	protein_coding	Hdac9	intron	ENSMUSG00000004698	ProperStrand	41	3	-12.2316
chr11	83856904	83856922	protein_coding	Synrg	utr3	ENSMUSG00000034940	ProperStrand	49	chr14	33005094	33005140	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-4.3775
chr12	70270032	70270049	protein_coding	Lrr1	exon	ENSMUSG00000034883	NonProperStrand	4	chr8	73032298	73032385	protein_coding	2810422J05Rik	exon	ENSMUSG00000055553	ProperStrand	171	1	-16.8648
chr15	61930771	61930823	lincRNA	Pvt1	intron	ENSMUSG00000072566	ProperStrand	51	chr3	123210854	123210877	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.3354
chr13	95558932	95602321	protein_coding	Tbca	exon	ENSMUSG00000042043	ProperStrand	3	chr2	158182233	158182297	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	2	-18.6362
chr17	24541896	24541951	protein_coding	Abca3	intron	ENSMUSG00000024130	NonProperStrand	1	chr16	23110530	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-inf
chr9	30235085	30235101	protein_coding	Snx19	exon	ENSMUSG00000031993	ProperStrand	353	chr15	79908931	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	2	-3.9475
chr15	98571774	98571819	protein_coding	Arf3	exon	ENSMUSG00000051853	ProperStrand	41	chr5	34894211	34894227	protein_coding	Sh3bp2	utr5	ENSMUSG00000054520	ProperStrand	43	1	-14.7589
chr14	32042378	32042394	protein_coding	Sema3g	utr3	ENSMUSG00000021904	NonProperStrand	47	chr10	23505221	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.5831
chr10	116499128	116499188	protein_coding	Cct2	exon	ENSMUSG00000034024	ProperStrand	100	chr3	123210854	123210919	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-3.9097
chr19	36189752	36189768	protein_coding	Ankrd1	exon	ENSMUSG00000024803	ProperStrand	11	chr7	146863023	146863043	protein_coding	9330101J02Rik	intron	ENSMUSG00000049571	ProperStrand	2	1	-inf
chr14	63181892	63181915	protein_coding	Fam124a	intron	ENSMUSG00000035184	NonProperStrand	5	chr5	121655083	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-8.7807
chr11	87172190	87172206	protein_coding	Ppm1e	exon	ENSMUSG00000046442	ProperStrand	112	chr15	82980190	82980223	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-5.9065
chr11	8893626	8893716	protein_coding	Hus1	utr3	ENSMUSG00000020413	ProperStrand	16	chr16	23111740	23111820	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.2713
chr6	33530005	33530036	protein_coding	Exoc4	exon	ENSMUSG00000029763	ProperStrand	120	chr5	108336417	108336494	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	4	-11.8340
chr8	129468746	129468879	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	chr15	98356821	98356901	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	2	-0.6932
chr2	118441216	118458158	protein_coding	Bub1b	exon	ENSMUSG00000040084	ProperStrand	45	chr4	131908728	131908860	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-8.7911
chr5	132024625	132024715	protein_coding	Auts2	intron	ENSMUSG00000029673	ProperStrand	71	chr10	42835139	42835229	protein_coding	Sobp	intron	ENSMUSG00000038248	ProperStrand	15	1	-15.7948
chr6	102151433	102151523	protein_coding	Cntn3	intron	ENSMUSG00000030075	NonProperStrand	13	chr6	102221971	102222061	protein_coding	Cntn3	intron	ENSMUSG00000030075	ProperStrand	7	1	-inf
chr1	44200425	44200442	protein_coding	Bivm	utr3	ENSMUSG00000041684	NonProperStrand	3	chr7	117189863	117189932	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-12.5479
chr10	80641445	80641475	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr2	26768049	26768119	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	3	-4.6727
chr5	138731144	138731244	protein_coding	Stag3	intron	ENSMUSG00000036928	ProperStrand	53	chr19	8798743	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-5.0410
chr10	79316213	79316230	lincRNA	E130317F20Rik	exon	ENSMUSG00000091994	NonProperStrand	97	chr18	35716832	35716885	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.4256
chr7	52076091	52076121	protein_coding	Nup62	intron	ENSMUSG00000043858	ProperStrand	47	chr18	35716830	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.5824
chr3	16102971	16103061	protein_coding	Ythdf3	intron	ENSMUSG00000047213	ProperStrand	22	chr4	131908329	131908409	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-5.3518
chr14	76926611	76926627	LINE	L1MB3	L1	chr14L1MB376926376	ProperStrand	61	chr11	62416575	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-8.4502
chr1	155073568	155073606	protein_coding	Lamc1	exon	ENSMUSG00000026478	ProperStrand	239	chr7	51809045	51809148	protein_coding	Nr1h2	utr5	ENSMUSG00000060601	ProperStrand	14	1	-13.5093
chr1	63578042	63578096	protein_coding-noncoding	Adam23	utr5	ENSMUSG00000025964	ProperStrand	1	chrX	72214248	72214264	protein_coding-noncoding	Gab3	utr3	ENSMUSG00000032750	ProperStrand	420	1	-inf
chr11	62087108	62087198	protein_coding	Zswim7	intron	ENSMUSG00000014243	ProperStrand	6	chr11	62342938	62343018	protein_coding	Cenpv	intron	ENSMUSG00000018509	NonProperStrand	1	1	-inf
chr12	86972695	86979745	protein_coding	Jdp2	exon	ENSMUSG00000034271	ProperStrand	19	chr2	181405343	181405359	protein_coding	Sox18	exon	ENSMUSG00000046470	ProperStrand	96	1	-14.7067
chr4	131908411	131908501	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr9	43047660	43047678	protein_coding	Oaf	utr5	ENSMUSG00000032014	NonProperStrand	11	2	-16.8721
chr7	55475249	55475267	LINE	L1_Mus4	L1	chr7L1_Mus455474496	ProperStrand	5	chr4	131865855	131865963	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	5	-inf
chr14	15572351	15572370	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr10	128909777	128909793	protein_coding	Olfr788	exon	ENSMUSG00000049217	NonProperStrand	6	1	-16.0226
chr15	98674949	98675017	protein_coding	Mll2	exon	ENSMUSG00000048154	ProperStrand	170	chr19	8963027	8963065	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-0.7860
chr12	87865704	87865722	SINE	RSINE1	B4	chr12RSINE187865630	ProperStrand	36	chr2	114376831	114376929	protein_coding	Atpbd4	intron	ENSMUSG00000057147	ProperStrand	9	1	-18.2601
chr9	50816824	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	2	-9.0021
chr7	19590197	19591429	protein_coding	Irf2bp1	exon	ENSMUSG00000044030	NonProperStrand	81	chr5	108334195	108334338	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	5	-17.0924
chr5	130295414	130295509	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	chr19	8798740	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	17	-6.7096
chr11	59509637	59545017	protein_coding	Mprip	utr5	ENSMUSG00000005417	ProperStrand	58	chr10	23505152	23505218	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-2.4578
chr12	44844128	44844156	snoRNA	ENSMUSG00000065004_SNORA33	.	ENSMUSG00000065004	ProperStrand	111	chr1	145626079	145626179	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-7.6006
chr4	129525262	129525285	protein_coding	Ptp4a2	utr3	ENSMUSG00000028788	ProperStrand	27	chr5	116011457	116012464	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	1	-11.7633
chr4	134302509	134302609	protein_coding	Ldlrap1	utr3	ENSMUSG00000037295	ProperStrand	18	chr1	162966018	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-5.9338
chr11	30012880	30013914	protein_coding	Spnb2	exon	ENSMUSG00000020315	ProperStrand	103	chr4	131908332	131908412	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.7317
chr4	43505688	43505719	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr5	27475786	27475804	protein_coding	Dpp6	intron	ENSMUSG00000061576	ProperStrand	35	1	-4.0672
chr11	7050901	7060219	protein_coding	Adcy1	exon	ENSMUSG00000020431	ProperStrand	183	chr19	8799600	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-4.5916
chr7	29107573	29108805	protein_coding	Supt5h	exon	ENSMUSG00000003435	ProperStrand	123	chr19	8800420	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-2.2656
chr2	90235316	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	194571765	194571880	snRNA	ENSMUSG00000064881_U5	.	ENSMUSG00000064881	ProperStrand	187	1	-2.3991
chr7	137977973	137978110	protein_coding	Fgfr2	intron	ENSMUSG00000030849	ProperStrand	100	chr18	7443316	7443406	protein_coding	Mpp7	intron	ENSMUSG00000057440	NonProperStrand	4	2	-19.7914
chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr5	147646789	147646848	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	6	-1.6616
chr15	73363866	73367766	protein_coding	Dennd3	exon	ENSMUSG00000036661	ProperStrand	11	chr1	88247800	88247835	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-8.5056
chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr10	23506278	23506347	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	10	-2.0379
chr8	77742563	77742580	protein_coding	Rasd2	exon	ENSMUSG00000034472	ProperStrand	18	chr8	125945404	125945456	protein_coding	Tubb3	exon	ENSMUSG00000062380	ProperStrand	8	1	-18.7139
chr12	114290175	114290191	protein_coding	Pacs2	intron	ENSMUSG00000021143	NonProperStrand	302	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	2	-9.3268
chr2	89368462	89368479	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	chr11	98878344	98878464	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	2	-5.8853
chr13	51743581	51743704	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	chr2	26494708	26494829	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	15	-4.2807
chr10	22990136	22990154	protein_coding	Eya4	intron	ENSMUSG00000010461	NonProperStrand	21	chr11	62416600	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-7.2498
chr11	80245251	80269727	protein_coding	Psmd11	exon	ENSMUSG00000017428	ProperStrand	34	chr7	29136527	29136640	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-5.7791
chr4	131908357	131908462	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr13	56988747	56988764	protein_coding	Trpc7	exon	ENSMUSG00000021541	NonProperStrand	3	1	-13.6164
chr3	122671519	122671544	protein_coding	Usp53	exon	ENSMUSG00000039701	ProperStrand	5	chr10	23505150	23505279	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-9.7958
chr19	6068075	6068092	protein_coding	1110014N23Rik	utr3	ENSMUSG00000024797	NonProperStrand	3	chr10	90432659	90432681	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	1	-16.9620
chr7	20283593	20284371	protein_coding	Apoe	utr5	ENSMUSG00000002985	ProperStrand	231	chr18	34036619	34038585	protein_coding	Epb4.1l4a	exon	ENSMUSG00000024376	ProperStrand	16	2	-inf
chr6	144924935	144925025	LINE	L1Md_A	L1	chr6L1Md_A144923562	NonProperStrand	1	chrX	51116364	51116444	LINE	L1Md_F3	L1	chrXL1Md_F351112173	NonProperStrand	1	1	-inf
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr13	52946090	52946109	protein_coding	Auh	intron	ENSMUSG00000021460	ProperStrand	10	1	-11.4509
chr6	52165758	52165774	protein_coding	Hoxa7	exon	ENSMUSG00000038236	ProperStrand	28	chr8	129468849	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-5.8992
chr10	76516088	76516136	protein_coding	Col18a1	exon	ENSMUSG00000001435	ProperStrand	287	chr3	68889026	68889126	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-0.8325
chr3	68889167	68889214	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	chr5	125884616	125884651	tRNA	tRNA1317-AlaTGC	.	288170	ProperStrand	149	1	-1.7195
chr15	81681745	81681835	protein_coding	Tob2	exon	ENSMUSG00000048546	ProperStrand	7	chr7	117189958	117190038	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-7.5942
mmu-miR-690	5	22	miRNA	mmu-miR-690	.	mmu-miR-690	ProperStrand	63	chrX	7720812	7721011	protein_coding	Rbm3	exon	ENSMUSG00000031167	ProperStrand	17	1	-15.7876
chr4	140592741	140593829	protein_coding	Crocc	exon	ENSMUSG00000040860	ProperStrand	44	chr5	35058657	35058673	protein_coding	Grk4	intron	ENSMUSG00000052783	ProperStrand	15	1	-16.8652
chr17	46813690	46813918	protein_coding	Klhdc3	exon	ENSMUSG00000063576	ProperStrand	35	chr5	147646411	147646460	snoRNA	ENSMUSG00000077185_SNORD102	.	ENSMUSG00000077185	ProperStrand	142	1	-12.6735
chr5	108336408	108336488	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	NonProperStrand	8	chr3	123210850	123210940	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	NonProperStrand	45	2	-19.4510
chr8	125096584	125096642	protein_coding	Cdt1	utr3	ENSMUSG00000006585	ProperStrand	47	chr2	26768050	26768119	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	3	-19.0720
chr6	37907528	37907546	protein_coding	Trim24	exon	ENSMUSG00000029833	ProperStrand	27	chr10	23505559	23505607	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-9.1559
chr12	68766439	68766529	LINE	L1_Mus2	L1	chr12L1_Mus268766146	ProperStrand	12	chr7	116663655	116663735	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-5.5543
chr1	39425093	39426889	protein_coding	Rpl31	exon	ENSMUSG00000073702	ProperStrand	41	chr17	24857717	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	7	-19.3440
chrX	166428146	166428236	protein_coding	Mid1	utr3	ENSMUSG00000035299	ProperStrand	209	chr6	71926170	71927364	protein_coding	Polr1a	exon	ENSMUSG00000049553	ProperStrand	109	1	-9.6122
chr8	26130972	26130991	protein_coding	Tm2d2	exon	ENSMUSG00000031556	ProperStrand	7	chr19	8800356	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	5	-inf
chr10	127559438	127560089	protein_coding	Baz2a	exon	ENSMUSG00000040054	ProperStrand	274	chr2	26494714	26494804	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-0.7904
chr2	26203131	26203147	protein_coding	Gpsm1	utr3	ENSMUSG00000026930	ProperStrand	93	chr9	121377572	121377631	protein_coding	Trak1	intron	ENSMUSG00000032536	ProperStrand	152	1	-10.5671
chr4	151039374	151039392	protein_coding	Camta1	intron	ENSMUSG00000014592	NonProperStrand	34	chr18	35716835	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.1571
chr13	23627625	23627725	protein_coding	Hist1h3g	exon	ENSMUSG00000062417	ProperStrand	25	chr2	166890543	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	5	-20.4419
chr4	131866155	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	chr9	40612123	40612164	snoRNA	ENSMUSG00000075924_Snord14d	.	ENSMUSG00000075924	ProperStrand	131	8	-18.6369
chr13	114214641	114214657	LTR	ORR1E-int	MaLR	chr13ORR1E-int114214583	NonProperStrand	1	chr5	130300436	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-inf
chr8	125626983	125627005	snoRNA	ENSMUSG00000064450_Snord68	.	ENSMUSG00000064450	ProperStrand	181	chr12	112779226	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-2.7362
chr7	118215902	118215922	protein_coding	Eif4g2	utr3	ENSMUSG00000005610	ProperStrand	134	chr19	3600718	3602254	protein_coding	Lrp5	exon	ENSMUSG00000024913	ProperStrand	145	1	-9.9298
chr15	88612593	88612646	protein_coding	Zbed4	exon	ENSMUSG00000034333	ProperStrand	19	chr16	23110896	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-3.1937
chr1	137345619	137346480	protein_coding	Nav1	exon	ENSMUSG00000009418	NonProperStrand	60	chr1	162966813	162966829	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	2	-10.1505
chrX	136145433	136145449	protein_coding	Rnf128	exon	ENSMUSG00000031438	NonProperStrand	9	chr16	23110939	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.9939
chr13	64197814	64197860	protein_coding	Slc35d2	utr3	ENSMUSG00000033114	ProperStrand	3	chr16	23111777	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-7.8619
chr1	158574140	158574165	protein_coding	Abl2	utr3	ENSMUSG00000026596	ProperStrand	37	chr7	29136525	29136615	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.2150
chr11	88878221	88878326	protein_coding	Trim25	utr3	ENSMUSG00000000275	ProperStrand	50	chr1	63225690	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	6	-20.3358
chr19	7351715	7351815	protein_coding	Mark2	exon	ENSMUSG00000024969	ProperStrand	75	chr11	97642952	97643028	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.0991
chr10	80927507	80927524	protein_coding	Celf5	intron	ENSMUSG00000034818	NonProperStrand	2	chr7	117189882	117189934	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-10.6222
chr15	82980190	82980224	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr18	75161534	75161602	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	3	-4.4315
chr7	52382098	52382143	protein_coding	Rpl13a	exon	ENSMUSG00000074129	ProperStrand	269	chr11	106362557	106362618	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-4.4725
chr7	148583761	148583851	protein_coding	Taldo1	intron	ENSMUSG00000025503	ProperStrand	28	chr8	129468753	129468833	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-5.8992
chr6	91984802	91984892	protein_coding	Fgd5	intron	ENSMUSG00000034037	ProperStrand	38	chr4	131908811	131908891	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.9012
chr10	3308860	3308881	protein_coding	Oprm1	utr3	ENSMUSG00000000766	ProperStrand	18	chr1	162968447	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-8.4949
chr12	110888883	110888910	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr11	62416578	62416637	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-1.1543
chr3	51030110	51030127	protein_coding	Ccrn4l	intron	ENSMUSG00000023087	NonProperStrand	3	chr11	106362638	106362672	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-13.7636
chr8	95355006	95355022	protein_coding	Mmp2	intron	ENSMUSG00000031740	ProperStrand	42	chr16	23110828	23110889	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.3954
chr19	43579408	43579425	protein_coding	Got1	intron	ENSMUSG00000025190	NonProperStrand	147	chr10	75399185	75400100	protein_coding	Chchd10	exon	ENSMUSG00000049422	ProperStrand	140	1	-9.8147
chr16	23110986	23111010	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chrX	131122016	131122058	protein_coding	Rpl36a	exon	ENSMUSG00000079435	ProperStrand	53	2	-14.6651
chr2	63056884	63056905	LINE	Lx5	L1	chr2Lx563056590	NonProperStrand	1	chr2	26494777	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-inf
chr19	3871278	3871368	protein_coding-noncoding	Chka	utr5	ENSMUSG00000024843	ProperStrand	6	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-11.9801
chr13	28653437	28700391	lincRNA	2610307P16Rik	exon	ENSMUSG00000085936	ProperStrand	154	chr4	131908300	131908417	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-0.8335
chr1	155325263	155325292	protein_coding	Dhx9	exon	ENSMUSG00000042699	ProperStrand	98	chr8	73419657	73419729	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.2775
chr17	13112530	13112566	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	chr8	34802316	34802406	snoRNA	ENSMUSG00000088856_SNORA48	.	ENSMUSG00000088856	ProperStrand	236	4	-7.8989
chr11	69548511	69548611	protein_coding	Polr2a	exon	ENSMUSG00000005198	NonProperStrand	10	chr4	153513807	153513824	protein_coding	Trp73	intron	ENSMUSG00000029026	ProperStrand	8	1	-19.7808
chr19	3456071	3456101	protein_coding	Ppp6r3	utr3	ENSMUSG00000024908	ProperStrand	63	chr11	78357047	78357097	protein_coding	Tmem97	exon	ENSMUSG00000037278	ProperStrand	35	1	-14.3110
chr15	98604924	98606960	protein_coding	Wnt10b	exon	ENSMUSG00000022996	NonProperStrand	189	chr1	162966205	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-5.3162
chr4	125855258	125855274	protein_coding	Thrap3	exon	ENSMUSG00000043962	ProperStrand	84	chr4	131908357	131908414	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.9682
chr13	21988808	21988833	miRNA	Mir1983	.	ENSMUSG00000088148	ProperStrand	23	chr11	62416635	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-7.0660
chr9	21634749	21635504	protein_coding	Dock6	exon	ENSMUSG00000032198	ProperStrand	155	chr9	15119360	15119427	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	23	-23.8850
chr8	86192637	86192654	protein_coding	Ptger1	exon	ENSMUSG00000019464	NonProperStrand	2	chr18	35714144	35714256	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	NonProperStrand	47	1	-inf
chr7	149170855	149171339	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	chr8	129468746	129468846	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	4	-9.0679
chr15	96063288	96063304	lincRNA	4833422M21Rik	exon	ENSMUSG00000085460	NonProperStrand	37	chr1	162965531	162966813	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.1770
chr5	52581647	52581677	protein_coding	Dhx15	utr5	ENSMUSG00000029169	ProperStrand	53	chr1	74415168	74415184	protein_coding	Gm216	exon	ENSMUSG00000073650	ProperStrand	33	1	-14.7587
chr2	130101241	130101265	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	chr4	131866614	131866676	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	3	-6.8234
chr14	76905096	76906282	protein_coding	Tsc22d1	exon	ENSMUSG00000022010	ProperStrand	86	chr14	124353869	124353886	protein_coding	Itgbl1	exon	ENSMUSG00000032925	ProperStrand	159	1	-10.6341
chr17	75053857	75054524	protein_coding	Birc6	exon	ENSMUSG00000024073	NonProperStrand	36	chr5	121655031	121655098	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.7185
chr12	110888915	110888938	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr1	145626057	145626103	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-4.2744
chr16	35839309	35839399	protein_coding	Parp14	intron	ENSMUSG00000034422	ProperStrand	7	chr16	23110828	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.4785
chr2	151545147	151545207	protein_coding	Psmf1	intron	ENSMUSG00000032869	ProperStrand	11	chr15	79913288	79913341	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-6.9253
chr4	155540428	155540450	protein_coding	Agrn	utr3	ENSMUSG00000041936	ProperStrand	175	chr14	3927968	3927988	protein_coding	Gm3002	intron	ENSMUSG00000079399	ProperStrand	26	1	-12.8571
chr11	101466312	101466351	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-1.3260
chr1	93263062	93263084	protein_coding	Fam132b	exon	ENSMUSG00000047443	NonProperStrand	98	chr11	69483136	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	5	-8.7228
chr5	121070696	121071632	protein_coding	Ddx54	exon	ENSMUSG00000029599	ProperStrand	104	chr6	71529835	71529852	protein_coding	Chmp3	utr3	ENSMUSG00000053119	ProperStrand	16	1	-14.9083
chr2	121132292	121132382	protein_coding	Mtap1a	exon	ENSMUSG00000027254	NonProperStrand	21	chr17	39985053	39985098	pseudogene	AY036118	.	ENSMUSG00000045999	ProperStrand	57	3	-19.1549
chr5	21262130	21262215	protein_coding	Pmpcb	intron	ENSMUSG00000029017	ProperStrand	16	chr15	102496272	102498152	protein_coding	Atp5g2	exon	ENSMUSG00000062683	ProperStrand	32	1	-17.2974
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr6	83111671	83111687	protein_coding	1700003E16Rik	exon	ENSMUSG00000030030	ProperStrand	352	2	-8.5656
chr2	89368462	89368479	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	chr19	8800356	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	9	-14.8105
chr13	29895016	29895032	protein_coding	Cdkal1	utr3	ENSMUSG00000006191	ProperStrand	43	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-2.3110
chr10	120984245	120984313	protein_coding	Tbk1	intron	ENSMUSG00000020115	ProperStrand	14	chr17	35299542	35299632	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-7.6757
chr15	101923454	101923554	protein_coding	Eif4b	exon	ENSMUSG00000058655	ProperStrand	484	chr11	77995188	77995242	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-2.2964
chr1	172096991	172097031	protein_coding	Uap1	exon	ENSMUSG00000026670	ProperStrand	18	chr18	21287501	21287537	protein_coding	Fam59a	utr3	ENSMUSG00000042680	ProperStrand	9	1	-18.8602
chr13	51806819	51806916	protein_coding	Sema4d	exon	ENSMUSG00000021451	ProperStrand	42	chr4	131865966	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.3470
chr5	130300417	130300435	protein_coding	Cct6a	intron	ENSMUSG00000029447	ProperStrand	128	chr9	63042015	63042031	protein_coding	Map2k5	exon	ENSMUSG00000058444	ProperStrand	193	1	-9.4499
chr4	139019516	139020598	protein_coding	Ubr4	exon	ENSMUSG00000066036	ProperStrand	304	chr17	24857725	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	8	-6.2826
chr1	124386160	124386250	LINE	Lx9	L1	chr1Lx9124385429	ProperStrand	1	chr1	124386529	124386609	LTR	RMER5	ERV1	chr1RMER5124386507	ProperStrand	1	1	-inf
chr14	48283834	48345647	protein_coding	Ktn1	exon	ENSMUSG00000021843	ProperStrand	64	chr16	23110902	23111010	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-4.1473
chr4	137865345	137865367	protein_coding	Ddost	exon	ENSMUSG00000028757	ProperStrand	49	chr18	35716759	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.5106
chr8	80103339	80103366	protein_coding	Prmt10	intron	ENSMUSG00000037134	ProperStrand	14	chr19	8798743	8798774	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-7.7004
chr6	33388384	33388457	protein_coding	Exoc4	exon	ENSMUSG00000029763	ProperStrand	120	chr18	33954846	33954936	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-2.2845
chr15	59147477	59147567	protein_coding	Sqle	exon	ENSMUSG00000022351	ProperStrand	19	chr16	23110919	23110999	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7016
chr7	56838236	56838304	protein_coding	Nav2	utr3	ENSMUSG00000052512	ProperStrand	106	chr11	69481387	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-3.9497
chr2	33312041	33312090	protein_coding	Zbtb43	intron	ENSMUSG00000026788	ProperStrand	4	chr12	106269446	106269484	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-9.7090
chr14	108986504	108986521	LTR	MTE-int	MaLR	chr14MTE-int108986408	ProperStrand	32	chr4	131908723	131908792	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.1812
chr4	144813432	144814193	protein_coding	Tnfrsf1b	exon	ENSMUSG00000028599	ProperStrand	13	chr4	131865859	131865939	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.5141
chr17	36097663	36097764	protein_coding	Abcf1	exon	ENSMUSG00000038762	ProperStrand	206	chr3	151938580	151938606	protein_coding	Fam73a	utr3	ENSMUSG00000054942	ProperStrand	34	1	-11.9860
chr17	23945362	23961563	protein_coding	Srrm2	utr3	ENSMUSG00000039218	ProperStrand	521	chr9	15119646	15119726	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	4	-1.0885
chr1	196966003	196966093	protein_coding	Cr2	intron	ENSMUSG00000026616	ProperStrand	2	chr16	11535083	11535173	protein_coding	Snx29	intron	ENSMUSG00000071669	NonProperStrand	38	1	-inf
chr11	79987895	79987912	antisense	Gm11206	.	ENSMUSG00000086507	ProperStrand	8	chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	1	-14.7373
chr15	80843358	80843438	protein_coding	Mkl1	utr3	ENSMUSG00000042292	ProperStrand	57	chr19	8799858	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	5	-18.9178
chr12	111867503	111867583	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr12	106269284	106269374	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	22	-20.0822
chr8	83262861	83262896	protein_coding	Smarca5	exon	ENSMUSG00000031715	ProperStrand	115	chr6	141417620	141417637	protein_coding	Pde3a	intron	ENSMUSG00000041741	ProperStrand	9	1	-15.8684
chr1	104577755	104577772	LINE	Lx3_Mus	L1	chr1Lx3_Mus104577177	ProperStrand	1	chr14	15572355	15572371	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	1	-inf
chr1	174220823	174220847	protein_coding	Atp1a2	exon	ENSMUSG00000007097	ProperStrand	12	chr4	131908236	131908295	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.2270
chr3	54518703	54518753	protein_coding	Fam48a	intron	ENSMUSG00000027751	ProperStrand	16	chr5	108334229	108334329	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-7.4462
chr2	25105521	25107254	protein_coding	Ndor1	exon	ENSMUSG00000006471	NonProperStrand	84	chr1	162966813	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-5.5980
chr7	16524110	16524179	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	chr18	33954816	33954906	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-0.7295
chr12	36747092	36747118	protein_coding	Tspan13	exon	ENSMUSG00000020577	ProperStrand	4	chr10	23505237	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-6.2798
chr13	24893593	24893660	protein_coding	BC005537	utr5	ENSMUSG00000019132	ProperStrand	11	chr16	23110824	23110914	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.6241
chr6	124761923	124761948	protein_coding	Tpi1	exon	ENSMUSG00000023456	ProperStrand	94	chrX	130496426	130496668	protein_coding	Sytl4	exon	ENSMUSG00000031255	ProperStrand	169	1	-10.3335
chr12	110104428	110105904	protein_coding	Wars	exon	ENSMUSG00000021266	ProperStrand	12	chr1	162965984	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-11.0138
chr9	122075466	122075482	protein_coding	Snrk	exon	ENSMUSG00000038145	NonProperStrand	97	chr11	106362640	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-6.4518
chr2	33013309	33013325	protein_coding	Ralgps1	exon	ENSMUSG00000038831	NonProperStrand	24	chr16	23110828	23110875	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.3518
chr13	63612936	63612952	protein_coding	Ptch1	exon	ENSMUSG00000021466	NonProperStrand	118	chr19	6984448	6984464	protein_coding	Prdx5	utr5	ENSMUSG00000024953	ProperStrand	24	1	-13.8088
chr2	127056279	127056369	protein_coding	Snrnp200	exon	ENSMUSG00000003660	ProperStrand	203	chr12	56451034	56451114	protein_coding	1110008L16Rik	intron	ENSMUSG00000021023	ProperStrand	20	1	-13.0970
chr8	36532336	36537452	protein_coding	Eri1	exon	ENSMUSG00000031527	ProperStrand	6	chr16	23111750	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-10.4591
chr7	24779190	24779213	SINE	ID_B1	B4	chr7ID_B124779183	NonProperStrand	54	chr15	99256421	99256437	protein_coding	Nckap5l	exon	ENSMUSG00000023009	ProperStrand	51	1	-13.8573
chr6	4157600	4157619	LINE	Lx9	L1	chr6Lx94156510	NonProperStrand	1	chr2	4974190	4974207	protein_coding	Optn	exon	ENSMUSG00000026672	ProperStrand	451	1	-inf
chr2	32140438	32140484	protein_coding	Swi5	intron	ENSMUSG00000044627	ProperStrand	16	chr17	24857714	24857763	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.7325
chr8	123196871	123196942	protein_coding	Cox4i1	intron	ENSMUSG00000031818	ProperStrand	31	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-8.3055
chr9	78328360	78328413	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr19	5308003	5308020	protein_coding	Gal3st3	utr3	ENSMUSG00000047658	NonProperStrand	8	2	-16.5834
chr2	24825186	24827046	protein_coding	Wdr85	exon	ENSMUSG00000026975	ProperStrand	323	chr17	35089181	35089232	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-2.3745
chr3	152450608	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	chr13	49779746	49779802	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-2.7337
chr10	79325790	79325951	protein_coding	Ptbp1	exon	ENSMUSG00000006498	ProperStrand	129	chr8	74008400	74008417	protein_coding	Ano8	exon	ENSMUSG00000034863	NonProperStrand	171	1	-9.6760
chr16	38347106	38347139	protein_coding	Cox17	utr5	ENSMUSG00000046516	ProperStrand	5	chr13	46862888	46862926	snoRNA	ENSMUSG00000064558_SNORA55	.	ENSMUSG00000064558	ProperStrand	187	1	-16.1782
chrX	34589398	34589415	protein_coding	Sowahd	exon	ENSMUSG00000044400	ProperStrand	26	chr2	22444518	22444538	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-9.4602
chr11	50195947	50196027	protein_coding-noncoding	Hnrnph1	utr5	ENSMUSG00000007850	ProperStrand	13	chr16	23110986	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-11.9579
chr15	57938309	57938330	protein_coding	Atad2	exon	ENSMUSG00000022360	ProperStrand	47	chr17	24856620	24856720	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-6.9118
chr8	24042846	24042864	protein_coding	Myst3	exon	ENSMUSG00000031540	ProperStrand	111	chr11	6428077	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.1289
chr11	48613866	48613956	protein_coding	Gnb2l1	utr5	ENSMUSG00000020372	ProperStrand	347	chr5	108336376	108336408	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-1.7548
chr11	96769304	96769409	protein_coding	Cdk5rap3	utr3	ENSMUSG00000018669	ProperStrand	16	chr4	131865395	131865440	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-6.5937
chr5	143647592	143647608	protein_coding	Fbxl18	exon	ENSMUSG00000066640	ProperStrand	64	chr5	115939529	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-7.7364
chr5	118376503	118376519	protein_coding	Nos1	exon	ENSMUSG00000029361	NonProperStrand	237	chr7	97592220	97592312	protein_coding	Crebzf	exon	ENSMUSG00000051451	ProperStrand	24	1	-12.4134
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr1	162967489	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	26	-19.2964
chrX	70885642	70885750	protein_coding	Dusp9	exon	ENSMUSG00000031383	ProperStrand	12	chr1	93342189	93345290	protein_coding	Per2	exon	ENSMUSG00000055866	ProperStrand	114	1	-15.3126
chr9	107302369	107302386	protein_coding	Cacna2d2	utr5	ENSMUSG00000010066	NonProperStrand	13	chr14	19101785	19102424	protein_coding	Rpl15	exon	ENSMUSG00000012405	ProperStrand	145	1	-14.6624
chr12	17552949	17553031	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr2	166890559	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	6	-5.2202
chr17	46716573	46716631	protein_coding	Ptk7	exon	ENSMUSG00000023972	ProperStrand	101	chr9	120037992	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	8	-19.5149
chr2	121282955	121283389	protein_coding	2310003F16Rik	exon	ENSMUSG00000027245	ProperStrand	40	chr4	122968627	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	2	-11.4099
chr6	71821479	71822814	protein_coding	Immt	exon	ENSMUSG00000052337	ProperStrand	48	chr4	131908811	131908849	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.5413
chr4	131931990	131932033	protein_coding	Phactr4	intron	ENSMUSG00000066043	ProperStrand	29	chr1	102076758	102076790	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	2	-17.1480
chr2	121804680	121804708	protein_coding	Ctdspl2	exon	ENSMUSG00000033411	ProperStrand	11	chr9	120039584	120039674	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-6.6296
chr19	8963025	8963182	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	chr5	125884616	125884651	tRNA	tRNA1317-AlaTGC	.	333652	ProperStrand	149	4	-4.4335
chr7	26013527	26013615	protein_coding	Gsk3a	utr3	ENSMUSG00000057177	ProperStrand	14	chr7	116664823	116664913	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-8.7689
chr7	106628075	106628133	snoRNA	ENSMUSG00000064966_Snord15b	.	ENSMUSG00000064966	ProperStrand	74	chr4	131908300	131908400	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-3.5345
chr13	14403470	14403487	protein_coding	Hecw1	intron	ENSMUSG00000021301	ProperStrand	15	chr17	46915898	46915955	protein_coding	Rpl7l1	intron	ENSMUSG00000063888	ProperStrand	37	1	-17.1125
chr14	51427276	51427314	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr12	88912985	88913005	protein_coding	Gm2022	intron	ENSMUSG00000071217	NonProperStrand	57	1	-7.3114
chr4	135873963	135892335	protein_coding	Hnrnpr	intron	ENSMUSG00000066037	ProperStrand	15	chr16	23110876	23111001	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-3.8284
chr16	97964918	97965008	protein_coding	Ripk4	exon	ENSMUSG00000005251	ProperStrand	28	chr8	13416896	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-7.9776
chrX	166428164	166428224	protein_coding	Mid1	utr3	ENSMUSG00000035299	ProperStrand	209	chr9	15119650	15119740	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-0.7893
chr15	37313435	37313452	protein_coding	Ncald	intron	ENSMUSG00000051359	ProperStrand	28	chr17	35089183	35089229	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-6.9955
chr4	86502745	86503228	protein_coding	Rps6	exon	ENSMUSG00000028495	ProperStrand	263	chr1	162965981	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-1.1772
chr2	127260189	127260571	protein_coding	Gpat2	exon	ENSMUSG00000046338	ProperStrand	19	chr4	131908256	131908346	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-5.7801
chr1	3783237	3783317	LINE	Lx7	L1	chr1Lx73783257	ProperStrand	1	chr1	3783758	3783848	Low_complexity	T-rich	Low_complexity	chr1T-rich3783758	ProperStrand	1	1	-inf
mmu-miR-6240	4	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr13	76341035	76341054	protein_coding	Fam81b	intron	ENSMUSG00000078966	NonProperStrand	220	1	-3.4265
chr13	114108601	114108691	protein_coding	BC067074	exon	ENSMUSG00000021763	ProperStrand	14	chr7	52382752	52382832	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-9.6945
chr14	57059009	57059109	protein_coding	Rnf17	intron	ENSMUSG00000000365	ProperStrand	16	chr12	106269284	106269357	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-6.7388
chr12	99497602	99497618	protein_coding	Galc	utr5	ENSMUSG00000021003	NonProperStrand	65	chr19	8963129	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.1423
chr11	48614367	48614421	snoRNA	ENSMUSG00000064500_SNORD95	.	ENSMUSG00000064500	ProperStrand	100	chr2	26768054	26768095	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	1	-7.3748
chr6	125592179	125592269	protein_coding	Vwf	exon	ENSMUSG00000001930	ProperStrand	20	chr12	17552950	17553030	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-7.2696
chr16	93892442	93893092	protein_coding-noncoding	Chaf1b	utr5	ENSMUSG00000022945	ProperStrand	7	chr7	29184574	29184595	protein_coding	Samd4b	utr3	ENSMUSG00000037513	ProperStrand	72	7	-inf
chr4	38081530	38081620	LINE	Lx3B	L1	chr4Lx3B38081504	NonProperStrand	1	chr4	38081387	38081477	LTR	MTD	MaLR	chr4MTD38081113	NonProperStrand	1	1	-inf
chr13	44964974	44965036	protein_coding	Jarid2	intron	ENSMUSG00000038518	ProperStrand	372	chr15	98350159	98350259	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	NonProperStrand	9	2	-20.1990
chr2	154361344	154361364	protein_coding	Cbfa2t2	utr3	ENSMUSG00000038533	ProperStrand	99	chr11	69483190	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-3.0419
chr15	98428802	98428820	protein_coding	Adcy6	exon	ENSMUSG00000022994	ProperStrand	50	chr6	125136468	125136568	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	11	-19.4796
chr8	32260348	32260428	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	chr11	69482353	69482443	snoRNA	ENSMUSG00000089542_snoU6-77	.	ENSMUSG00000089542	ProperStrand	138	1	-3.0801
chr2	54965336	54965352	protein_coding	Galnt13	exon	ENSMUSG00000060988	ProperStrand	45	chr3	123210934	123210985	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-4.4959
chr2	113672914	113673003	protein_coding	Arhgap11a	utr3	ENSMUSG00000041219	ProperStrand	47	chr5	130300526	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.9365
chr2	11510631	11510678	protein_coding	Rbm17	exon	ENSMUSG00000037197	ProperStrand	50	chr13	76192773	76192791	protein_coding	Gpr150	utr3	ENSMUSG00000045509	NonProperStrand	63	2	-19.2793
chr11	60257068	60257119	protein_coding	4933439F18Rik	utr3	ENSMUSG00000018415	ProperStrand	26	chr14	31827477	31827545	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-8.6227
chr2	26295984	26296021	protein_coding	Sec16a	exon	ENSMUSG00000026924	ProperStrand	86	chr17	46824279	46824404	protein_coding	Ppp2r5d	exon	ENSMUSG00000059409	ProperStrand	97	1	-11.6251
chr10	12341172	12353751	protein_coding	Utrn	exon	ENSMUSG00000019820	ProperStrand	69	chr11	7067186	7069426	protein_coding	Adcy1	exon	ENSMUSG00000020431	ProperStrand	183	1	-10.7951
chr15	81937523	81937539	protein_coding	Mei1	exon	ENSMUSG00000068117	ProperStrand	53	chr1	162966813	162966852	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-6.5043
chr10	127509207	127511310	protein_coding	Ptges3	exon	ENSMUSG00000071072	ProperStrand	89	chr16	23111372	23111447	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-1.5803
chr15	99820735	99820795	protein_coding	Larp4	exon	ENSMUSG00000023025	ProperStrand	41	chr18	35716768	35716868	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.8214
chr5	115798884	115798964	protein_coding	Cox6a1	utr5	ENSMUSG00000041697	ProperStrand	38	chr17	24857760	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.0936
chr8	104510035	104510052	LINE	L1_Rod	L1	chr8L1_Rod104509928	NonProperStrand	26	chr19	8799830	8799878	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-6.5948
chr3	108216967	108216984	protein_coding	Celsr2	exon	ENSMUSG00000068740	ProperStrand	47	chr4	131908687	131908780	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.5727
chr2	158203969	158204053	snoRNA	ENSMUSG00000065840_SNORA71	.	ENSMUSG00000065840	ProperStrand	107	chr3	68889152	68889244	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-2.2482
chr8	114303289	114354849	protein_coding	Cfdp1	exon	ENSMUSG00000031954	ProperStrand	32	chr17	35089181	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-6.7280
chr5	115597362	115607993	protein_coding	Mlec	exon	ENSMUSG00000048578	ProperStrand	47	chr10	23505151	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	11	-inf
chr4	108139541	108139641	snRNA	ENSMUSG00000070174_U6	.	ENSMUSG00000070174	ProperStrand	1	chr9	15119722	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-inf
chr11	117729550	117729567	protein_coding	Tha1	utr3	ENSMUSG00000017713	ProperStrand	2	chr9	64024766	64024813	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	1	-16.1452
chr4	43505837	43505927	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr14	57312831	57312858	protein_coding	Mphosph8	intron	ENSMUSG00000079184	NonProperStrand	27	1	-4.5649
chr11	100581379	100581396	protein_coding	Rab5c	utr5	ENSMUSG00000019173	ProperStrand	76	chr9	64659390	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-8.4532
chr13	107737212	107737228	protein_coding	Dimt1	utr5	ENSMUSG00000021692	ProperStrand	185	chr2	37421258	37421305	protein_coding	Rabgap1	utr3	ENSMUSG00000035437	ProperStrand	20	1	-13.2816
chr7	72457500	72457590	protein_coding	Tjp1	exon	ENSMUSG00000030516	ProperStrand	78	chr7	116663649	116663729	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-3.7346
chr2	126920866	126920882	protein_coding	Blvra	exon	ENSMUSG00000001999	NonProperStrand	4	chr1	89673711	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-8.7610
chr6	70794803	70794820	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chr15	75578185	75578202	protein_coding	Mafa	exon	ENSMUSG00000047591	NonProperStrand	7	1	-15.8621
chr11	106852595	106852734	protein_coding	Kpna2	exon	ENSMUSG00000018362	ProperStrand	70	chr12	55169442	55169460	protein_coding	Npas3	exon	ENSMUSG00000021010	NonProperStrand	29	1	-14.4798
chr8	90304979	90304995	protein_coding	Zfp423	exon	ENSMUSG00000045333	NonProperStrand	44	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-8.3608
chr6	139269491	139271036	LTR	RLTR11A	ERVK	chr6RLTR11A139270883	NonProperStrand	4	chr7	116664794	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	4	-inf
chr17	79319594	79319619	protein_coding	1110001A16Rik	utr3	ENSMUSG00000062691	ProperStrand	7	chr17	35089182	35089252	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	3	-19.2498
chr11	80707576	80707593	protein_coding	Accn1	exon	ENSMUSG00000020704	ProperStrand	69	chr4	116826699	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-6.5046
chr11	116203956	116204043	protein_coding	Rnf157	intron	ENSMUSG00000052949	ProperStrand	32	chr16	23111473	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	6	-13.6504
chr10	80107050	80107403	protein_coding	Btbd2	exon	ENSMUSG00000003344	ProperStrand	68	chr16	23111450	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.0916
chr11	45723144	45723160	protein_coding	Clint1	utr3	ENSMUSG00000006169	NonProperStrand	273	chr8	108368732	108368784	protein_coding	Cenpt	utr3	ENSMUSG00000036672	ProperStrand	13	1	-13.3917
chr11	121478366	121478436	protein_coding	B3gntl1	utr3	ENSMUSG00000046605	ProperStrand	4	chr17	35089181	35089211	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-11.1133
chr16	37834252	37834328	protein_coding	Fstl1	utr3	ENSMUSG00000022816	ProperStrand	179	chr3	104023982	104023998	protein_coding	Magi3	utr5	ENSMUSG00000052539	ProperStrand	19	1	-13.4535
chr7	13615474	13615656	protein_coding	Trim28	exon	ENSMUSG00000005566	ProperStrand	296	chr11	98878344	98878385	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-3.2414
chr6	38303992	38304112	protein_coding	Zc3hav1	exon	ENSMUSG00000029826	ProperStrand	20	chr15	79913288	79913313	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-5.7112
chr2	90558214	90561351	protein_coding	Nup160	exon	ENSMUSG00000051329	ProperStrand	49	chr7	116664809	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	13	-inf
chr2	35035841	35035899	protein_coding	Rab14	utr3	ENSMUSG00000026878	ProperStrand	21	chr11	77996560	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	3	-18.0238
chr14	65209660	65209677	lincRNA	A930011O12Rik	exon	ENSMUSG00000091456	ProperStrand	2	chr13	8256116	8256135	protein_coding	Adarb2	intron	ENSMUSG00000052551	ProperStrand	292	1	-17.4942
chr11	69717300	69717388	protein_coding	Neurl4	intron	ENSMUSG00000047284	ProperStrand	28	chr16	23111372	23111416	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.4504
chr13	68759738	68764669	protein_coding	Adcy2	exon	ENSMUSG00000021536	ProperStrand	237	chr17	39985500	39985522	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-3.3178
chrY	581857	581874	protein_coding	Uty	exon	ENSMUSG00000068457	ProperStrand	26	chr16	23110827	23110851	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.2392
chr9	120038468	120038552	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	chr8	125626932	125626992	snoRNA	ENSMUSG00000064450_Snord68	.	ENSMUSG00000064450	ProperStrand	181	1	-1.2609
chr2	76249300	76249316	protein_coding	Osbpl6	intron	ENSMUSG00000042359	ProperStrand	19	chr19	8963025	8963081	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.3710
chr3	96218359	96218449	misc_RNA	Telomerase-vert	.	ENSMUSG00000064796	ProperStrand	443	chr12	17552950	17553030	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-1.5503
chr5	81522762	81522780	protein_coding	Lphn3	intron	ENSMUSG00000037605	NonProperStrand	39	chr11	69483195	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.2098
chr4	141024666	141024758	protein_coding	Spen	utr3	ENSMUSG00000040761	ProperStrand	161	chr8	87426786	87426805	protein_coding	Klf1	exon	ENSMUSG00000054191	NonProperStrand	70	1	-11.0224
chr12	82051045	82051124	protein_coding	Srsf5	utr3	ENSMUSG00000021134	ProperStrand	68	chr3	123210881	123210972	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	5	-9.5042
chr11	113613108	113613124	protein_coding	Cdc42ep4	utr5	ENSMUSG00000041598	ProperStrand	56	chr4	131865855	131865977	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.8759
chr4	117545848	117545895	protein_coding	B4galt2	utr3	ENSMUSG00000028541	ProperStrand	11	chr19	39917317	39917333	protein_coding	Cyp2c69	utr3	ENSMUSG00000092008	NonProperStrand	83	1	-16.1403
chr17	34252207	34252340	protein_coding	Brd2	exon	ENSMUSG00000024335	ProperStrand	69	chr8	129468745	129468794	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-4.1483
chr6	146128701	146128717	protein_coding	Itpr2	exon	ENSMUSG00000030287	ProperStrand	20	chr16	23111389	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.0472
chr15	79908956	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	chr2	130101262	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	8	-6.0962
chr2	169935728	169935744	protein_coding	Zfp217	utr3	ENSMUSG00000052056	ProperStrand	79	chr10	23505222	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-0.8821
chr4	151368477	151368495	protein_coding	Phf13	intron	ENSMUSG00000047777	ProperStrand	38	chr12	85350481	85350499	protein_coding	Acot1	utr5	ENSMUSG00000072949	ProperStrand	72	1	-13.8700
chr14	80262508	80262524	lincRNA	Gm6999	intron	ENSMUSG00000075495	ProperStrand	265	chr19	8963026	8963126	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	4	-2.3575
chr8	127993731	127993748	protein_coding	Sipa1l2	exon	ENSMUSG00000001995	NonProperStrand	8	chr1	192712615	192712631	protein_coding	Rps6kc1	exon	ENSMUSG00000089872	ProperStrand	241	1	-14.6624
chr10	76534075	76534369	protein_coding	Col18a1	exon	ENSMUSG00000001435	ProperStrand	287	chr15	101925112	101925177	protein_coding	Eif4b	exon	ENSMUSG00000058655	ProperStrand	484	1	-6.0273
chr10	6450631	6450649	protein_coding	Plekhg1	intron	ENSMUSG00000040624	NonProperStrand	75	chr15	34370661	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-3.1423
chr6	4719940	4720030	LTR	ORR1A2	MaLR	chr6ORR1A24719692	ProperStrand	1	chr6	4720129	4720219	LTR	ORR1D1-int	MaLR	chr6ORR1D1-int4720038	NonProperStrand	1	1	-inf
chr13	32897224	32897253	protein_coding	Wrnip1	exon	ENSMUSG00000021400	ProperStrand	16	chr1	162965531	162965596	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-9.5621
chr6	135159294	135159374	protein_coding	8430419L09Rik	exon	ENSMUSG00000030207	ProperStrand	14	chr13	54784519	54784987	protein_coding	Rnf44	exon	ENSMUSG00000034928	ProperStrand	90	1	-15.4604
chr11	29607490	29642658	protein_coding	Rtn4	utr3	ENSMUSG00000020458	ProperStrand	117	chr16	23111374	23111482	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-1.0848
chr18	12927053	12929816	protein_coding	Osbpl1a	exon	ENSMUSG00000044252	ProperStrand	39	chr11	69483136	69483192	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-5.5270
chr18	4427697	4427787	LTR	MMETn-int	ERVK	chr18MMETn-int4427105	ProperStrand	1	chr13	24564193	24564273	protein_coding	Cmah	utr3	ENSMUSG00000016756	NonProperStrand	53	1	-inf
chr5	145890794	145890884	protein_coding	Pdap1	utr3	ENSMUSG00000029623	ProperStrand	112	chr5	108336427	108336491	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-3.6985
chr4	134259103	134259121	protein_coding	Man1c1	exon	ENSMUSG00000037306	ProperStrand	22	chr4	131865855	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-8.8412
chr5	102265052	102265142	protein_coding	Wdfy3	utr3	ENSMUSG00000043940	ProperStrand	45	chr3	123210904	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.5489
chrX	138159145	138159161	protein_coding	Irs4	exon	ENSMUSG00000054667	NonProperStrand	98	chr8	73419673	73419738	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.2775
chr8	83235661	83237889	protein_coding	Smarca5	exon	ENSMUSG00000031715	ProperStrand	115	chr4	131866197	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	9	-19.4834
chr2	179628011	179628029	protein_coding	Cdh4	exon	ENSMUSG00000000305	ProperStrand	171	chr10	127520474	127520507	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	1	-6.5840
chr16	93906186	93906228	protein_coding	Chaf1b	exon	ENSMUSG00000022945	ProperStrand	28	chr1	161270513	161270555	snoRNA	ENSMUSG00000089536_Scarna3a	.	ENSMUSG00000089536	ProperStrand	247	3	-19.6840
chr10	126924872	126924900	protein_coding	R3hdm2	exon	ENSMUSG00000025404	ProperStrand	33	chr1	165983749	165983765	protein_coding	Sele	exon	ENSMUSG00000026582	NonProperStrand	31	1	-15.8227
chr5	124826182	124826216	protein_coding	Sbno1	exon	ENSMUSG00000038095	ProperStrand	134	chr3	123210890	123210980	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-1.8321
chr15	98683837	98683861	protein_coding	Mll2	exon	ENSMUSG00000048154	ProperStrand	170	chr11	62416606	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-3.2066
chr8	113447055	113447145	snoRNA	ENSMUSG00000065100_SNORA57	.	ENSMUSG00000065100	ProperStrand	81	chr1	162965980	162966040	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	5	-13.4320
chr16	97965647	97965769	protein_coding	Ripk4	exon	ENSMUSG00000005251	ProperStrand	28	chr15	99537800	99537838	protein_coding	Smarcd1	exon	ENSMUSG00000023018	ProperStrand	43	10	-22.3528
chr17	30761869	30763733	protein_coding	Dnahc8	intron	ENSMUSG00000033826	ProperStrand	246	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-4.9665
chr2	32563527	32563545	protein_coding	Cdk9	exon	ENSMUSG00000009555	NonProperStrand	49	chr12	17552950	17553040	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-5.4840
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr1	182261853	182261869	protein_coding	Itpkb	intron	ENSMUSG00000038855	NonProperStrand	27	1	-10.3270
chr7	52382013	52382081	protein_coding-noncoding	Rpl13a	utr3	ENSMUSG00000074129	ProperStrand	106	chr17	88042935	88042966	protein_coding	Epcam	exon	ENSMUSG00000045394	ProperStrand	43	2	-20.0241
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr2	130101971	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	9	-6.1440
chr6	72178971	72178988	protein_coding	Atoh8	intron	ENSMUSG00000037621	NonProperStrand	61	chr10	90432660	90432676	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	1	-10.5853
chr11	79792133	79792150	LTR	RMER6B	ERVK	chr11RMER6B79792120	ProperStrand	1	chrX	148362849	148362875	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	1	-inf
chr10	82827170	82827212	protein_coding	D10Wsu102e	exon	ENSMUSG00000020255	ProperStrand	42	chr12	88488443	88496424	protein_coding	Pomt2	exon	ENSMUSG00000034126	NonProperStrand	331	2	-16.6583
chr5	108776045	108776133	protein_coding	Pigg	intron	ENSMUSG00000029263	ProperStrand	11	chr4	131865856	131865946	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.8470
chr19	9047567	9051876	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	chr16	23109043	23109093	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-3.5691
chr19	34999238	34999254	protein_coding	Kif20b	exon	ENSMUSG00000024795	NonProperStrand	28	chr16	23111447	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.4504
chr2	162862445	162866374	protein_coding	Ift52	exon	ENSMUSG00000017858	ProperStrand	10	chr10	112365272	112365300	protein_coding	Atxn7l3b	utr3	ENSMUSG00000074748	ProperStrand	18	1	-19.1178
chr12	88488443	88496424	protein_coding	Pomt2	exon	ENSMUSG00000034126	NonProperStrand	331	chr10	80644021	80644093	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-2.8737
chr17	26230822	26230899	protein_coding	Nme4	exon	ENSMUSG00000024177	ProperStrand	9	chr7	116663653	116663743	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-6.1447
chr6	122681597	122682466	protein_coding	Slc2a3	exon	ENSMUSG00000003153	ProperStrand	682	chr19	8799610	8799645	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-2.2208
chr18	73693166	73693188	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr19	8799581	8799644	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	2	-0.8013
chr5	124282218	124282235	SINE	RSINE1	B4	chr5RSINE1124282118	NonProperStrand	2	chr1	162965979	162966032	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-10.9191
chr13	3573591	3573691	protein_coding	BC016423	exon	ENSMUSG00000033799	ProperStrand	15	chr17	39985320	39985372	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-8.7194
chr2	152607875	152607975	protein_coding	Bcl2l1	utr3	ENSMUSG00000007659	ProperStrand	9	chr18	35102297	35102340	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-10.4546
chr11	6519865	6519941	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	chr6	71832550	71832650	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-0.9824
chr13	97905299	97905399	protein_coding	Nsa2	exon	ENSMUSG00000060739	ProperStrand	9	chr19	8799025	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-9.6830
chr10	41950145	41950235	protein_coding	Foxo3	intron	ENSMUSG00000048756	ProperStrand	59	chr4	131865413	131865493	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-4.0339
chr5	92611598	92611647	protein_coding	Uso1	intron	ENSMUSG00000029407	ProperStrand	17	chr17	12585979	12585995	protein_coding	Plg	exon	ENSMUSG00000059481	ProperStrand	86	1	-15.1568
mmu-miR-295-3p	1	23	miRNA	mmu-miR-295-3p	.	mmu-miR-295-3p	ProperStrand	19	chr4	131866607	131866667	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	1	-11.4351
chr16	17642911	17643011	protein_coding	Smpd4	utr3	ENSMUSG00000005899	ProperStrand	33	chr18	75161109	75161173	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	1	-10.2264
chr18	36018586	36018611	protein_coding	Cxxc5	exon	ENSMUSG00000046668	ProperStrand	30	chr11	62416951	62417004	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-7.4229
chr1	180267700	180267748	protein_coding	Hnrnpu	utr5	ENSMUSG00000039630	ProperStrand	286	chr14	61398407	61398423	protein_coding	C1qtnf9	exon	ENSMUSG00000071347	ProperStrand	187	1	-7.9107
chr8	87196354	87196430	protein_coding	Nacc1	utr3	ENSMUSG00000001910	ProperStrand	130	chr5	125885965	125886055	tRNA	tRNA1316-AspGTC	.	432037	ProperStrand	8	1	-15.8473
chr11	101845984	101846049	protein_coding	Dusp3	exon	ENSMUSG00000003518	ProperStrand	4	chr16	23111776	23111808	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-7.1763
chr9	59238589	59238610	protein_coding	Arih1	utr3	ENSMUSG00000025234	ProperStrand	75	chr11	101238274	101238291	protein_coding	G6pc	utr3	ENSMUSG00000078650	ProperStrand	6	1	-17.5256
chr6	85412061	85412151	protein_coding	Cct7	exon	ENSMUSG00000030007	ProperStrand	173	chr8	119960473	119960553	protein_coding	4933407C03Rik	exon	ENSMUSG00000034390	ProperStrand	48	2	-18.0993
chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	chr18	74938046	74938146	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	ProperStrand	1022	6	-19.5632
chr11	59299714	59299782	protein_coding	Zkscan17	utr3	ENSMUSG00000020472	ProperStrand	23	chr19	5901226	5901255	protein_coding	Dpf2	exon	ENSMUSG00000024826	ProperStrand	38	1	-16.1727
chr1	36881662	36882143	protein_coding	Tmem131	exon	ENSMUSG00000026116	ProperStrand	129	chr10	90581058	90581138	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-3.3687
chr5	16652083	16652163	LINE	L1MA9	L1	chr5L1MA916651918	ProperStrand	1	chr5	16652193	16652283	LTR	RMER19B	ERVK	chr5RMER19B16652149	NonProperStrand	1	1	-inf
chr11	62417005	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	chr11	51551280	51551336	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	1	-1.1076
chr8	125626932	125626951	protein_coding-noncoding	Rpl13	utr5	ENSMUSG00000000740	ProperStrand	9	chr7	52958453	52958469	protein_coding	Car11	exon	ENSMUSG00000003273	NonProperStrand	250	1	-14.3366
chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	chr19	8798484	8798513	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-1.6179
chr2	12941437	12941454	LTR	MTE2a	MaLR	chr2MTE2a12941159	NonProperStrand	42	chr5	121655099	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.4217
chr1	93252080	93252096	protein_coding	Klhl30	exon	ENSMUSG00000026308	ProperStrand	27	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.7840
chr11	88805715	88805793	protein_coding	Scpep1	exon	ENSMUSG00000000278	ProperStrand	54	chr2	130103752	130103825	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-8.6828
chr16	4429206	4429287	LTR	MTB_Mm-int	MaLR	chr16MTB_Mm-int4429226	NonProperStrand	1	chr16	4429069	4429159	SINE	B1_Mus2	Alu	chr16B1_Mus24429080	NonProperStrand	1	1	-inf
chr5	125077278	125077294	protein_coding	Tctn2	utr3	ENSMUSG00000029386	NonProperStrand	22	chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	2	-13.5193
chr11	77996586	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	chr10	23505559	23505624	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-1.0431
chr19	10058737	10058810	protein_coding	Fth1	exon	ENSMUSG00000024661	ProperStrand	75	chr11	69481343	69481433	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-2.8025
chr11	95917243	95919635	protein_coding	Ube2z	exon	ENSMUSG00000014349	ProperStrand	41	chr7	52381972	52382036	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	3	-16.8940
chrX	72354354	72354429	protein_coding	Dkc1	utr3	ENSMUSG00000031403	ProperStrand	89	chr12	110923172	110923231	snoRNA	ENSMUSG00000084487_SNORD113	.	ENSMUSG00000084487	ProperStrand	183	2	-16.2225
chr2	181371779	181371803	protein_coding	Prpf6	exon	ENSMUSG00000002455	ProperStrand	54	chr15	76001872	76001972	protein_coding	Plec	utr3	ENSMUSG00000022565	ProperStrand	186	1	-11.2560
chr6	8508504	8508541	protein_coding	Glcci1	exon	ENSMUSG00000029638	ProperStrand	5	chr2	181405343	181405359	protein_coding	Sox18	exon	ENSMUSG00000046470	ProperStrand	96	1	-17.3644
chr9	72569398	72572825	protein_coding	Nedd4	exon	ENSMUSG00000032216	ProperStrand	308	chr7	118219574	118219635	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-1.3789
chr4	71785813	71785923	protein_coding	Tle1	utr3	ENSMUSG00000008305	ProperStrand	16	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-10.4039
chr8	94012235	94012254	protein_coding	Fto	intron	ENSMUSG00000055932	ProperStrand	34	chr4	116826698	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-7.9164
chr9	57101020	57101129	protein_coding	1700017B05Rik	utr3	ENSMUSG00000032300	ProperStrand	22	chr9	120038004	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-6.6827
chr9	120040180	120040279	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	chr18	63238396	63238412	protein_coding	Fam38b	exon	ENSMUSG00000041482	NonProperStrand	50	4	-22.3657
chr2	164255189	164256734	protein_coding	Sdc4	exon	ENSMUSG00000017009	ProperStrand	177	chr17	35087926	35087960	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-3.1655
chr13	3561137	3561227	protein_coding	Gdi2	exon	ENSMUSG00000021218	ProperStrand	49	chr4	131908712	131908792	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.5109
chr7	29780453	29780470	protein_coding	Map4k1	intron	ENSMUSG00000037337	NonProperStrand	2	chr16	23111372	23111447	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-8.0851
chr11	4986030	4988040	protein_coding	Ewsr1	exon	ENSMUSG00000009079	ProperStrand	248	chr11	69483194	69483279	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	11	-13.5829
chr2	22018097	22018197	LINE	L1_Mus1	L1	chr2L1_Mus122016482	ProperStrand	1	chr4	131908235	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-inf
chr2	90235289	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	107494024	107494483	protein_coding	Ifrd2	exon	ENSMUSG00000010048	ProperStrand	8	3	-19.2694
chr7	87543752	87543777	protein_coding	Furin	utr5	ENSMUSG00000030530	ProperStrand	22	chr9	78327841	78327936	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-8.3448
chr13	5864319	5864368	protein_coding	Klf6	exon	ENSMUSG00000000078	ProperStrand	10	chr1	136789937	136790016	protein_coding	Ppp1r12b	exon	ENSMUSG00000073557	ProperStrand	21	5	-22.5398
chr4	46482820	46484310	protein_coding	Anp32b	exon	ENSMUSG00000028333	ProperStrand	229	chr8	82167667	82167686	protein_coding	Otud4	exon	ENSMUSG00000036990	ProperStrand	45	1	-11.2074
chr5	77711920	77711936	protein_coding	Rest	exon	ENSMUSG00000029249	NonProperStrand	273	chr1	102076756	102076792	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	1	-6.4221
chr3	145239611	145239628	protein_coding	Znhit6	exon	ENSMUSG00000074182	NonProperStrand	3	chr16	23111372	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-6.9982
chr1	180558406	180558423	protein_coding	Kif26b	intron	ENSMUSG00000026494	NonProperStrand	14	chr13	49779679	49779752	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	3	-20.3734
chr7	28966563	28966582	protein_coding	Dyrk1b	utr5	ENSMUSG00000002409	ProperStrand	3	chr11	62416601	62416620	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-11.4760
chr13	29480116	29480163	protein_coding	Cdkal1	intron	ENSMUSG00000006191	ProperStrand	43	chr1	71674631	71674982	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	1	-8.5008
chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	chr5	115939537	115939575	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-4.1389
chr1	87942550	87942568	protein_coding	2810459M11Rik	exon	ENSMUSG00000026227	ProperStrand	1	chr1	88423316	88423424	protein_coding	Ptma	utr5	ENSMUSG00000026238	ProperStrand	385	1	-inf
chr16	3856858	3856877	protein_coding	Zfp174	utr3	ENSMUSG00000054939	NonProperStrand	166	chr5	130300438	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	5	-6.1360
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	7	-2.4420
chr18	9989754	9992226	protein_coding	Thoc1	exon	ENSMUSG00000024287	ProperStrand	13	chr5	121658431	121658467	protein_coding	Rpl6	exon	ENSMUSG00000029614	ProperStrand	332	5	-inf
chr11	83160241	83160286	protein_coding	Ap2b1	exon	ENSMUSG00000035152	ProperStrand	60	chr8	73419657	73419729	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	5	-13.7232
chr15	103183749	103184006	protein_coding	Itga5	exon	ENSMUSG00000000555	NonProperStrand	8	chr16	23111374	23111464	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.8232
chr3	27235059	27235093	protein_coding	Tnfsf10	utr3	ENSMUSG00000039304	ProperStrand	18	chr3	68889024	68889243	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	14	-19.7133
chr11	5682123	5682139	pseudogene	2210015D19Rik	.	ENSMUSG00000083844	ProperStrand	24	chr5	108336363	108336409	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-6.6878
chr10	92916320	92922573	protein_coding	Lta4h	exon	ENSMUSG00000015889	ProperStrand	12	chr1	162286088	162286104	protein_coding	Rabgap1l	intron	ENSMUSG00000026721	ProperStrand	44	1	-17.2847
chr6	127883375	127883455	protein_coding	Tspan11	intron	ENSMUSG00000030351	NonProperStrand	5	chrX	53870990	53871080	protein_coding	Slc9a6	intron	ENSMUSG00000060681	NonProperStrand	1	1	-inf
chr7	117189864	117189954	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr3	34551245	34551266	protein_coding	Sox2	utr3	ENSMUSG00000074637	ProperStrand	299	1	-3.1542
chr7	110699285	110699365	protein_coding	Olfr613	utr5	ENSMUSG00000078624	NonProperStrand	13	chr7	13312974	13313064	protein_coding	Vmn2r56	intron	ENSMUSG00000090762	NonProperStrand	1	1	-inf
chr13	38308290	38308369	protein_coding	Snrnp48	exon	ENSMUSG00000021431	ProperStrand	5	chr1	168042163	168042213	protein_coding	Dusp27	exon	ENSMUSG00000026564	ProperStrand	47	1	-19.2340
chr14	119006269	119006287	protein_coding	Abcc4	intron	ENSMUSG00000032849	NonProperStrand	24	chr1	88247816	88247864	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-6.9092
chr7	52975699	52975820	protein_coding	Rpl18	exon	ENSMUSG00000059070	ProperStrand	116	chr7	116663637	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	5	-8.0020
chr11	50122337	50122427	protein_coding	Canx	exon	ENSMUSG00000020368	ProperStrand	296	chr7	52382751	52382831	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-3.6747
chr13	56804912	56804928	protein_coding	Smad5	utr5	ENSMUSG00000021540	ProperStrand	47	chr17	24857776	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.7154
chr8	88264259	88288205	protein_coding	Itfg1	exon	ENSMUSG00000031703	ProperStrand	38	chr15	34370554	34370634	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-4.4093
chrX	98643128	98643225	protein_coding	Nono	utr3	ENSMUSG00000031311	ProperStrand	102	chr7	116664869	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.6852
chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	chr11	106362568	106362643	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-3.3169
chr5	77343930	77350548	protein_coding	Ppat	exon	ENSMUSG00000029246	ProperStrand	55	chr9	15119659	15119968	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-4.8529
chr12	88576699	88576779	LTR	ORR1A3	MaLR	chr12ORR1A388576562	ProperStrand	1	chr5	129236559	129236649	SINE	B4A	B4	chr5B4A129236522	NonProperStrand	1	1	-inf
chr17	23001669	23001698	protein_coding-noncoding	Zfp945	utr3	ENSMUSG00000059142	ProperStrand	1	chr1	88247768	88247848	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-inf
chr17	56397955	56398020	protein_coding	Fem1a	exon	ENSMUSG00000043683	ProperStrand	11	chr1	162966003	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	3	-16.0730
chr17	66432768	66436752	protein_coding	Ndufv2	exon	ENSMUSG00000024099	ProperStrand	17	chr16	23111758	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.1536
chr4	129992479	129992519	protein_coding	Fabp3	utr3	ENSMUSG00000028773	ProperStrand	93	chr9	15119717	15119969	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-3.4583
chr7	17040701	17040717	protein_coding	Tmem160	exon	ENSMUSG00000019158	ProperStrand	55	chr14	76247711	76247777	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-4.3373
chr7	85961141	85961165	LINE	Lx8	L1	chr7Lx885961130	NonProperStrand	1	chr9	119854625	119854641	protein_coding	Ttc21a	exon	ENSMUSG00000032514	ProperStrand	6	1	-inf
chr3	96073720	96073786	protein_coding	Hist2h2bb	exon	ENSMUSG00000050936	ProperStrand	57	chr16	23111392	23111482	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.3302
chr9	111133211	111133288	protein_coding	Mlh1	intron	ENSMUSG00000032498	ProperStrand	13	chr7	51505224	51505270	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	1	-11.2607
chr15	102069846	102069897	protein_coding	Rarg	exon	ENSMUSG00000001288	ProperStrand	156	chr6	71444631	71444648	protein_coding	Rnf103	utr5	ENSMUSG00000052656	NonProperStrand	11	1	-14.8573
chrX	83547356	83547372	protein_coding	Mageb4	intron	ENSMUSG00000035427	NonProperStrand	191	chr17	39985356	39985428	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-3.7128
chr1	129210679	129245221	protein_coding	Mgat5	intron	ENSMUSG00000036155	ProperStrand	33	chr16	23110857	23110989	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-3.0989
chr7	52303815	52303901	protein_coding	Prr12	exon	ENSMUSG00000046574	ProperStrand	86	chr11	97642957	97643047	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	4	-7.2866
chr12	36219400	36219416	protein_coding	Ahr	utr5	ENSMUSG00000019256	NonProperStrand	64	chr19	8963027	8963083	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.1678
chr8	53444479	53444579	LTR	IAP-d-int	ERVK	chr8IAP-d-int53443769	ProperStrand	1	chr15	34370545	34370608	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-inf
chr4	137818054	137818072	protein_coding	Kif17	intron	ENSMUSG00000028758	NonProperStrand	15	chr17	35089001	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-8.6538
chr7	132604632	132604732	protein_coding	Jmjd5	exon	ENSMUSG00000030752	ProperStrand	4	chrX	34622904	34622930	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-8.6589
chr10	42576608	42576644	LTR	ORR1A3	MaLR	chr10ORR1A342576615	ProperStrand	14	chr15	79913288	79913311	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-6.4303
chr1	38367560	38367579	antisense	Gm16151	.	ENSMUSG00000085280	ProperStrand	1	chr4	131865867	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr11	69556260	69556282	protein_coding	Polr2a	exon	ENSMUSG00000005198	ProperStrand	200	chr14	119693352	119693368	protein_coding	Hs6st3	intron	ENSMUSG00000053465	NonProperStrand	134	1	-9.2872
chr7	52573735	52573754	protein_coding	Trpm4	exon	ENSMUSG00000038260	ProperStrand	161	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-6.9604
chr19	10689376	10689995	protein_coding	Ddb1	exon	ENSMUSG00000024740	ProperStrand	304	chr2	121949513	121949530	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	1	-7.0618
chr6	15750691	15750713	protein_coding	Mdfic	utr3	ENSMUSG00000041390	ProperStrand	2	chr11	101466250	101466350	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	1	-16.3718
chr13	65141913	65142003	LINE	Lx4B	L1	chr13Lx4B65141794	NonProperStrand	1	chr13	65154963	65155043	LINE	Lx7	L1	chr13Lx765154893	NonProperStrand	1	1	-inf
chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	chr7	52381761	52381806	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	2	-6.0723
chr4	130042376	130045477	protein_coding	Snrnp40	exon	ENSMUSG00000074088	NonProperStrand	3	chr8	32260334	32260389	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	NonProperStrand	14	1	-inf
chr1	44025796	44025814	protein_coding	Tpp2	exon	ENSMUSG00000041763	ProperStrand	22	chr4	131908810	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-4.9672
chr17	13115655	13115708	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	chr14	31827477	31827497	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-1.6341
chr17	13184995	13185013	protein_coding	Wtap	utr5	ENSMUSG00000060475	ProperStrand	119	chr11	69483136	69483211	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.3734
chr8	98269959	98270076	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	chr14	76247746	76247842	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	16	-4.1688
chr17	27700433	27700533	protein_coding	Hmga1	utr3	ENSMUSG00000046711	ProperStrand	180	chr5	116010915	116010959	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	2	-12.6874
chr6	114260511	114260527	protein_coding	Slc6a1	exon	ENSMUSG00000030310	NonProperStrand	147	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.7567
chr11	97007813	97007830	protein_coding	Tbkbp1	exon	ENSMUSG00000038517	ProperStrand	10	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.0395
chr2	25059457	25059752	protein_coding	Cobra1	exon	ENSMUSG00000013465	ProperStrand	17	chr4	126698958	126699048	protein_coding	Sfpq	exon	ENSMUSG00000028820	ProperStrand	340	1	-12.3994
chr7	52382190	52382231	protein_coding-noncoding	Rpl13a	utr3	ENSMUSG00000074129	ProperStrand	106	chr11	99885311	99885327	protein_coding	Krt33b	exon	ENSMUSG00000057723	NonProperStrand	352	1	-8.6287
chr2	158182156	158182180	lincRNA	9430008C03Rik	intron	ENSMUSG00000085385	ProperStrand	1039	chr19	9047582	9051891	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	1	-3.8806
chr2	9781256	9781272	protein_coding	Gata3	intron	ENSMUSG00000015619	ProperStrand	12	chr4	131908359	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.2270
chr19	45734313	45734329	protein_coding	Fbxw4	exon	ENSMUSG00000040913	NonProperStrand	6	chr2	26494742	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-7.6788
chr1	191058375	191058393	protein_coding	Kcnk2	intron	ENSMUSG00000037624	ProperStrand	56	chr18	35716831	35716879	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.2842
chr10	72437415	72437431	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr5	124999730	124999755	protein_coding	Tmed2	utr3	ENSMUSG00000029390	ProperStrand	15	1	-11.1294
chr19	5800419	5800443	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr6	85418268	85418368	protein_coding	Cct7	utr3	ENSMUSG00000030007	ProperStrand	173	15	-inf
chr2	121949510	121949527	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	chr4	131908689	131908896	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-1.0223
chr3	115642557	115642632	protein_coding	Slc30a7	utr3	ENSMUSG00000054414	ProperStrand	5	chr8	98269959	98269996	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-10.6614
chr4	21838605	21838621	protein_coding	Coq3	utr3	ENSMUSG00000028247	ProperStrand	10	chrX	132673816	132673833	protein_coding	Bex4	intron	ENSMUSG00000047844	NonProperStrand	70	1	-16.6757
chr18	67989529	67994161	protein_coding	Cep192	exon	ENSMUSG00000024542	ProperStrand	59	chr18	75161133	75161159	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	8	-19.5498
chr19	53406810	53406826	protein_coding	Mxi1	intron	ENSMUSG00000025025	ProperStrand	51	chr17	28023311	28023327	protein_coding	Uhrf1bp1	exon	ENSMUSG00000039512	NonProperStrand	14	1	-16.6867
chr1	108206857	108206957	protein_coding	Phlpp1	intron	ENSMUSG00000044340	ProperStrand	67	chr8	73419711	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-5.0833
chr16	11144176	11144276	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr12	112779171	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	NonProperStrand	10	2	-19.4040
chr19	53692619	53693269	protein_coding	Smc3	exon	ENSMUSG00000024974	ProperStrand	61	chr5	111121182	111121200	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-6.4017
chr8	108411086	108411247	protein_coding	Edc4	exon	ENSMUSG00000036270	ProperStrand	34	chr4	131908356	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.3115
chr13	90429859	90429911	LTR	MMETn-int	ERVK	chr13MMETn-int90425773	ProperStrand	1	chr11	68886930	68887020	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-inf
chr2	167836656	167836680	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	chrX	6951555	6951571	protein_coding	Usp27x	exon	ENSMUSG00000046269	NonProperStrand	36	1	-13.1653
chr15	76911547	76911660	protein_coding	Rbfox2	utr3	ENSMUSG00000033565	ProperStrand	55	chr11	69481333	69481380	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.3588
chr4	126044977	126045777	protein_coding	Eif2c3	exon	ENSMUSG00000028842	ProperStrand	8	chr7	116663749	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-6.3908
chr2	90235316	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chrX	58225380	58225396	pseudogene	Rpl7l1-ps1	.	ENSMUSG00000081323	ProperStrand	46	1	-4.9744
chr17	45585068	45585158	protein_coding	Spats1	intron	ENSMUSG00000023935	ProperStrand	4	chr6	125071742	125071822	snoRNA	ENSMUSG00000088208_SCARNA11	.	ENSMUSG00000088208	ProperStrand	113	1	-18.0583
chr1	135355740	135355757	LTR	RMER17B	ERVK	chr1RMER17B135355166	ProperStrand	1	chr18	35714144	35714204	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-inf
chr11	106144328	106144346	protein_coding	Tcam1	exon	ENSMUSG00000020712	NonProperStrand	5	chr2	26768054	26768120	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	1	-13.5525
chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr11	6520321	6520442	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	30	-19.3975
chr17	45682199	45682216	protein_coding	Tmem151b	exon	ENSMUSG00000050405	NonProperStrand	1	chr7	52381974	52381992	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-inf
chr9	15514257	15514276	protein_coding	Slc36a4	exon	ENSMUSG00000043885	ProperStrand	94	chr7	116663663	116663763	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.7772
chr13	24824232	24824248	protein_coding	Fam65b	utr3	ENSMUSG00000036006	ProperStrand	51	chr8	72422348	72422365	protein_coding	Ndufa13	intron	ENSMUSG00000036199	NonProperStrand	1	1	-inf
chr3	88714276	88714549	protein_coding	Msto1	exon	ENSMUSG00000068922	ProperStrand	36	chr19	8800085	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-8.6325
chr2	179927674	179929937	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr8	129468745	129468797	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	3	-3.9515
chr15	34192627	34192652	protein_coding	Laptm4b	intron	ENSMUSG00000022257	ProperStrand	24	chr7	116664821	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-10.3222
chr17	35299525	35299615	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	chr5	147646756	147646846	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	2	-1.1360
chr9	15119996	15120201	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	chr9	15119967	15120033	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	3	-9.2172
chr4	116827104	116827186	protein_coding-noncoding	Rps8	utr3	ENSMUSG00000047675	ProperStrand	14	chr16	23110455	23110493	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	4	-16.5450
chr19	9047515	9051814	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	chr5	92485137	92485217	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	1	-4.9513
chr3	136526736	136526753	protein_coding	Ppp3ca	intron	ENSMUSG00000028161	NonProperStrand	120	chr12	60774053	60774082	snoRNA	ENSMUSG00000077603_SNORA3	.	ENSMUSG00000077603	ProperStrand	185	1	-9.6635
chr2	71299126	71299144	protein_coding	Metap1d	intron	ENSMUSG00000041921	ProperStrand	21	chr9	44142947	44143028	protein_coding	H2afx	exon	ENSMUSG00000049932	ProperStrand	137	1	-13.7850
chr11	72261265	72261365	protein_coding	Mybbp1a	exon	ENSMUSG00000040463	ProperStrand	279	chr1	162968477	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-3.1591
chr3	135215609	135215667	protein_coding	Manba	intron	ENSMUSG00000028164	ProperStrand	18	chr7	116663634	116663724	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.7447
chr7	25757204	25757227	protein_coding	Rabac1	exon	ENSMUSG00000003380	ProperStrand	19	chr4	131866238	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-5.8910
chr16	36919247	36919347	protein_coding	Golgb1	exon	ENSMUSG00000034243	ProperStrand	92	chr19	8963039	8963085	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	14	-inf
chr8	86246442	86246622	protein_coding	Ddx39	exon	ENSMUSG00000005481	ProperStrand	24	chr7	116663634	116663714	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.1859
chr3	88446868	88447077	protein_coding	Arhgef2	exon	ENSMUSG00000028059	ProperStrand	13	chr19	8799847	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-8.0039
chr3	35896483	35899410	protein_coding	Mccc1	exon	ENSMUSG00000027709	ProperStrand	6	chr4	131865879	131865979	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-6.1051
chr8	125626596	125626628	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	chr8	124941192	124941239	protein_coding	Zc3h18	utr3	ENSMUSG00000017478	ProperStrand	55	1	-10.7852
chr17	24818081	24818123	protein_coding	Zfp598	exon	ENSMUSG00000041130	ProperStrand	26	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.1929
chr2	45366734	45366753	LINE	Lx5	L1	chr2Lx545366405	ProperStrand	3	chr7	150717298	150717415	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	3	-inf
chr10	61772868	61772885	protein_coding	Hk1	intron	ENSMUSG00000037012	NonProperStrand	16	chr2	75766906	75766979	protein_coding	Agps	utr3	ENSMUSG00000042410	ProperStrand	22	1	-17.9664
chr17	41936461	41936551	LTR	MT2B2	ERVL	chr17MT2B241936306	NonProperStrand	1	chr17	41936592	41936682	LTR	ORR1A2-int	MaLR	chr17ORR1A2-int41936573	NonProperStrand	1	1	-inf
chr4	57876732	57876822	protein_coding	Akap2	intron	ENSMUSG00000038729	ProperStrand	14	chr18	35714187	35714267	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-6.2700
chr2	31657951	31658041	protein_coding	Abl1	utr3	ENSMUSG00000090901	ProperStrand	15	chrX	71517859	71517939	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-9.3428
chr9	9779931	9779947	protein_coding	Cntn5	intron	ENSMUSG00000039488	NonProperStrand	10	chr19	8963051	8963151	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.6521
chr10	127551713	127551743	protein_coding	Baz2a	exon	ENSMUSG00000040054	ProperStrand	274	chr19	28658284	28658304	protein_coding	Glis3	intron	ENSMUSG00000052942	ProperStrand	14	1	-13.2332
chr9	78267152	78268406	protein_coding	Ddx43	exon	ENSMUSG00000070291	ProperStrand	3	chr8	113362445	113362512	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	1	-15.6344
chr9	51771502	51771582	protein_coding	Fdx1	utr5	ENSMUSG00000032051	ProperStrand	8	chr11	69481332	69481422	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-7.1653
chr19	10139902	10139992	protein_coding	Fads2	intron	ENSMUSG00000024665	ProperStrand	47	chr8	73419703	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.5766
chr9	24789067	24789157	LINE	Lx8	L1	chr9Lx824788909	NonProperStrand	1	chr9	25294797	25294887	protein_coding-noncoding	Eepd1	utr5	ENSMUSG00000036611	ProperStrand	1	1	-inf
chr1	127421680	127421770	SINE	B3A	B2	chr1B3A127421653	ProperStrand	1	chr1	127421509	127421599	SINE	ID_B1	B4	chr1ID_B1127421424	ProperStrand	1	1	-inf
chr4	132530100	132530117	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	chr15	8178700	8178800	protein_coding	2410089E03Rik	exon	ENSMUSG00000039801	ProperStrand	43	1	-10.2711
chr2	150663130	150663161	protein_coding	Abhd12	exon	ENSMUSG00000032046	ProperStrand	38	chr5	110799422	110799439	protein_coding	Fbrsl1	intron	ENSMUSG00000043323	NonProperStrand	11	1	-17.5665
chr6	115757078	115757135	protein_coding	Rpl32	exon	ENSMUSG00000057841	ProperStrand	137	chr16	23111776	23111826	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-3.8762
chr9	26906297	26906313	protein_coding	Jam3	exon	ENSMUSG00000031990	ProperStrand	30	chr7	52382158	52382431	protein_coding	Rpl13a	exon	ENSMUSG00000074129	ProperStrand	269	1	-11.7064
chr14	31827478	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	chr16	23109028	23109089	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	4	-5.9669
chr1	46892344	46892375	protein_coding	Slc39a10	exon	ENSMUSG00000025986	ProperStrand	95	chr11	55296276	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-5.2803
chr2	90235291	90235345	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	8963032	8963048	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	7	-13.3721
chr13	117089727	117089744	protein_coding	Isl1	exon	ENSMUSG00000042258	NonProperStrand	17	chr1	162965531	162965579	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-9.3718
chr9	61241066	61242437	protein_coding	Tle3	exon	ENSMUSG00000032280	ProperStrand	88	chr17	24857717	24857807	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-3.1093
chr15	102043247	102043263	protein_coding	Zfp740	utr3	ENSMUSG00000046897	ProperStrand	34	chr11	55296276	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-7.3099
chr6	114260511	114260527	protein_coding	Slc6a1	exon	ENSMUSG00000030310	NonProperStrand	147	chr19	8798484	8798545	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-3.5132
chr1	55143717	55143783	protein_coding	Hspd1	exon	ENSMUSG00000025980	ProperStrand	140	chr11	106362672	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-5.7317
chr9	24549572	24549616	protein_coding	Tbx20	intron	ENSMUSG00000031965	NonProperStrand	110	chr11	68887021	68887065	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-3.0278
chr15	81431858	81431916	protein_coding	Ep300	exon	ENSMUSG00000055024	ProperStrand	118	chr8	129468776	129468866	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	20	-inf
chr1	162966189	162966254	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	chr11	77995189	77995212	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-1.1194
chr11	101466240	101466338	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	chr11	55296277	55296334	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	4	-7.7808
chr1	67056560	67056576	protein_coding	Lancl1	exon	ENSMUSG00000026000	NonProperStrand	2	chr1	63225253	63225309	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	1	-16.3736
chr13	16534601	16534622	DNA	MER44B	MER2_type	chr13MER44B16534603	ProperStrand	3	chr14	52694958	52695025	protein_coding	Hnrnpc	exon	ENSMUSG00000060373	ProperStrand	75	3	-inf
chr16	17147703	17147764	protein_coding	Ydjc	exon	ENSMUSG00000041774	ProperStrand	7	chr16	23110829	23110867	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-6.1472
chr2	103252260	103252276	protein_coding	Elf5	utr5	ENSMUSG00000027186	ProperStrand	2	chr5	130300420	130300476	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-9.6890
chr12	70327365	70327381	protein_coding	Pole2	exon	ENSMUSG00000020974	ProperStrand	6	chr5	121655032	121655100	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-8.3778
chr13	38619902	38619919	protein_coding	Txndc5	intron	ENSMUSG00000038991	ProperStrand	48	chr11	106362557	106362630	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-7.8503
chr4	118955408	118955446	protein_coding	Ybx1	exon	ENSMUSG00000028639	ProperStrand	171	chr8	13876175	13876227	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	2	-8.3650
chr10	66711795	66717253	protein_coding	Jmjd1c	exon	ENSMUSG00000037876	ProperStrand	110	chr4	131908809	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	6	-5.5472
chr3	89904193	89904242	protein_coding	Tpm3	utr3	ENSMUSG00000027940	ProperStrand	55	chr11	45794766	45794782	protein_coding	Sox30	exon	ENSMUSG00000040489	NonProperStrand	4	1	-18.8945
chr11	115075276	115075292	protein_coding	Tmem104	intron	ENSMUSG00000045980	ProperStrand	4	chr18	73693170	73693186	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-11.1535
chr3	94836664	94836738	protein_coding	Psmd4	utr3	ENSMUSG00000005625	ProperStrand	20	chr7	123476683	123476700	snoRNA	ENSMUSG00000064741_Snord14a	.	ENSMUSG00000064741	ProperStrand	83	2	-19.6031
chr7	34990829	34990868	protein_coding	Gpi1	exon	ENSMUSG00000036427	ProperStrand	288	chr11	69483190	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	5	-3.4416
chr15	76734809	76734860	protein_coding	Rpl8	exon	ENSMUSG00000003970	ProperStrand	191	chr18	33954839	33954929	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	4	-6.3000
chr12	111856750	111856793	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr3	95980311	95980401	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-2.3825
chr3	89009743	89009759	protein_coding	Gba	exon	ENSMUSG00000028048	NonProperStrand	88	chr11	33056089	33056680	protein_coding	Npm1	exon	ENSMUSG00000057113	ProperStrand	352	1	-9.0007
chr13	9833561	9833680	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr11	68405412	68405430	protein_coding	Ccdc42	intron	ENSMUSG00000045915	NonProperStrand	4	4	-inf
chr8	32239595	32239611	protein_coding	Rnf122	utr3	ENSMUSG00000039328	NonProperStrand	42	chr19	8963027	8963124	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.8907
chr18	61747723	61747756	protein_coding	Csnk1a1	utr3	ENSMUSG00000024576	ProperStrand	64	chr7	116664794	116664884	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-6.4756
chr6	83068675	83068691	protein_coding	Mogs	exon	ENSMUSG00000030036	ProperStrand	14	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-11.1145
chr18	89387605	89387621	protein_coding	Cd226	intron	ENSMUSG00000034028	ProperStrand	47	chr19	8963128	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.6924
chr7	20281639	20281696	protein_coding	Apoe	utr3	ENSMUSG00000002985	ProperStrand	231	chr8	126026844	126026934	protein_coding	Afg3l1	utr3	ENSMUSG00000031967	ProperStrand	29	1	-12.0808
chr6	131330345	131330411	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	ProperStrand	408	chr4	131866643	131866673	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	1	-5.3148
chr6	92192564	92192643	protein_coding	Trh	exon	ENSMUSG00000005892	ProperStrand	87	chr1	162967513	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-4.8817
chr2	119773471	119773570	protein_coding	Mga	exon	ENSMUSG00000033943	ProperStrand	180	chr7	116663711	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-0.8820
chr5	141090405	141090422	protein_coding	Lfng	exon	ENSMUSG00000029570	NonProperStrand	92	chr8	13416896	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	2	-9.1679
chr5	76753365	76753406	protein_coding	Pdcl2	utr5	ENSMUSG00000029235	ProperStrand	6	chr8	129468744	129468857	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-9.0857
chr18	75127227	75127244	LINE	L2b	L2	chr18L2b75127181	ProperStrand	19	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.4761
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	128867196	128867212	protein_coding	Yars	exon	ENSMUSG00000028811	ProperStrand	131	2	-5.2025
chr10	67351289	67351379	protein_coding	Zfp365	utr3	ENSMUSG00000037855	ProperStrand	9	chr7	148634705	148634785	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-7.7646
chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	chr12	109460710	109460726	protein_coding	Ccdc85c	intron	ENSMUSG00000084883	ProperStrand	157	2	-13.8034
chr8	46136850	46136940	protein_coding	Fat1	utr3	ENSMUSG00000070047	ProperStrand	306	chr5	130300445	130300538	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	21	-inf
chr13	38310779	38310855	protein_coding	Snrnp48	intron	ENSMUSG00000021431	ProperStrand	5	chr2	170426901	170426919	protein_coding	4930470P17Rik	utr5	ENSMUSG00000043583	ProperStrand	8	3	-18.8127
chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	chr5	23358027	23358058	snoRNA	ENSMUSG00000093321_Snord93	.	ENSMUSG00000093321	ProperStrand	218	1	-4.4670
chr16	57391760	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr8	18870889	18876052	protein_coding	Agpat5	exon	ENSMUSG00000031467	ProperStrand	7	1	-12.2103
chr2	32434024	32434041	protein_coding	Pip5kl1	exon	ENSMUSG00000046854	NonProperStrand	8	chr4	63389602	63389618	protein_coding	Tnfsf15	utr3	ENSMUSG00000050395	NonProperStrand	121	1	-15.9940
chr19	44188387	44188466	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr14	33005038	33005106	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	3	-0.8827
chr9	44192564	44192646	protein_coding	Hyou1	exon	ENSMUSG00000032115	ProperStrand	145	chr17	13112457	13112571	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	10	-19.2819
chr18	63908609	63908625	protein_coding	Wdr7	intron	ENSMUSG00000040560	NonProperStrand	180	chr1	162966204	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-5.4108
chr4	41662338	41662438	protein_coding	Dctn3	intron	ENSMUSG00000028447	ProperStrand	4	chr12	112779247	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-10.3781
chr18	10052129	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr13	55698430	55698451	protein_coding	Tmed9	utr3	ENSMUSG00000058569	ProperStrand	35	1	-9.8862
chr5	115956842	115956858	protein_coding	Pxn	utr5	ENSMUSG00000029528	ProperStrand	171	chr1	75447246	75447262	protein_coding	Accn4	utr5	ENSMUSG00000033007	NonProperStrand	23	2	-18.7235
chr10	62802344	62802360	protein_coding	Sirt1	intron	ENSMUSG00000020063	NonProperStrand	116	chr9	15119631	15119712	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.5626
chrX	20596900	20596990	LINE	L1Md_F	L1	chrXL1Md_F20595740	ProperStrand	1	chr19	8963097	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-inf
chr8	31464422	31464446	LTR	MERVL_2A-int	ERVL	chr8MERVL_2A-int31464360	ProperStrand	6	chr16	23110454	23110527	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-16.5279
chr13	6591840	6591920	protein_coding	Pfkp	intron	ENSMUSG00000021196	ProperStrand	197	chr3	68889026	68889116	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-1.3116
chr3	96676422	96676438	protein_coding	Gpr89	exon	ENSMUSG00000028096	NonProperStrand	2	chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-13.8971
chr17	24858208	24858600	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr7	117166811	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-1.5943
chr12	89699698	89699714	protein_coding	Adck1	utr3	ENSMUSG00000021044	NonProperStrand	42	chr16	23111438	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.7838
chr17	24856644	24856734	protein_coding	Rps2	intron	ENSMUSG00000044533	ProperStrand	373	chr8	73419683	73419773	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	NonProperStrand	53	1	-9.9025
chr7	26481008	26481026	protein_coding	Tgfb1	intron	ENSMUSG00000002603	ProperStrand	17	chr16	23111777	23111822	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.1536
chr6	125333968	125333984	SINE	ID_B1	B4	chr6ID_B1125333922	NonProperStrand	1	chr10	44870268	44870315	protein_coding	Prep	exon	ENSMUSG00000019849	ProperStrand	21	1	-inf
chr12	111929758	111929848	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr9	59519839	59523413	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	5	-11.1960
chr6	38577350	38577366	protein_coding	Klrg2	utr3	ENSMUSG00000071537	NonProperStrand	37	chr2	26493407	26493484	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-4.6603
chr2	26767737	26767795	protein_coding-noncoding	Rpl7a	utr5	ENSMUSG00000062647	ProperStrand	53	chr16	23110905	23110964	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-3.8575
chr14	80024662	80024762	protein_coding	Sugt1	exon	ENSMUSG00000022024	ProperStrand	11	chr16	23110514	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.6740
chr16	18956342	18969624	protein_coding	Hira	exon	ENSMUSG00000022702	ProperStrand	28	chr5	111121060	111121126	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-7.9576
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-2.7269
chr4	84192700	84192717	protein_coding	Bnc2	intron	ENSMUSG00000028487	ProperStrand	76	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-7.2686
chr2	150068094	150068174	LINE	L1Md_F3	L1	chr2L1Md_F3150067916	ProperStrand	40	chr3	105849097	105849187	LINE	L1Md_F3	L1	chr3L1Md_F3105848986	ProperStrand	38	37	-inf
chr14	72998916	73051834	protein_coding	Fndc3a	exon	ENSMUSG00000033487	ProperStrand	84	chr8	80079400	80079438	protein_coding	Prmt10	intron	ENSMUSG00000037134	ProperStrand	14	2	-inf
chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	chr8	32260355	32260417	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-1.1449
chr11	54510506	54510556	protein_coding	Rapgef6	utr3	ENSMUSG00000037533	ProperStrand	27	chr16	23110902	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-3.7531
chr4	43505823	43505876	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr12	109460710	109460726	protein_coding	Ccdc85c	intron	ENSMUSG00000084883	ProperStrand	157	1	-1.4865
chr5	125316615	125316632	protein_coding	Ccdc92	exon	ENSMUSG00000037979	ProperStrand	45	chr11	69481379	69481407	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.7296
chr11	68886928	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	chr8	98269959	98270096	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	11	-1.3934
chr2	27936467	27938439	protein_coding	Fcnb	exon	ENSMUSG00000026835	ProperStrand	11	chr1	82488450	82488467	protein_coding	Col4a4	intron	ENSMUSG00000067158	NonProperStrand	3	1	-22.5261
chr11	47165145	47165162	protein_coding-noncoding	Sgcd	utr3	ENSMUSG00000020354	ProperStrand	3	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-15.7420
chr15	93333357	93333374	protein_coding	Prickle1	intron	ENSMUSG00000036158	ProperStrand	11	chr9	72871371	72871388	protein_coding	Pigb	intron	ENSMUSG00000079469	NonProperStrand	1	1	-inf
chr8	13879705	13879805	protein_coding	Zfp828	exon	ENSMUSG00000047710	ProperStrand	32	chr16	23111383	23111446	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	6	-13.6504
chr10	62520024	62520043	protein_coding	Pbld2	intron	ENSMUSG00000020068	ProperStrand	3	chr18	35714143	35714204	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-9.6483
chr17	24561362	24561396	protein_coding	Rnps1	exon	ENSMUSG00000034681	NonProperStrand	3	chr6	7933164	7933277	pseudogene	Gm9825	.	ENSMUSG00000048365	NonProperStrand	1	1	-inf
chr7	133726521	133726538	protein_coding	Cln3	exon	ENSMUSG00000030720	ProperStrand	87	chr14	70978821	70978850	protein_coding	Nudt18	exon	ENSMUSG00000045211	ProperStrand	5	1	-17.5003
chr17	71857922	71857951	protein_coding	Ndc80	exon	ENSMUSG00000024056	ProperStrand	33	chr8	26266023	26266040	protein_coding	Tacc1	utr3	ENSMUSG00000065954	NonProperStrand	6	1	-18.8073
chr7	4098872	4098952	protein_coding	Leng8	utr3	ENSMUSG00000035545	ProperStrand	49	chr19	8963084	8963174	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.6199
chrX	11635848	11635865	protein_coding	Bcor	exon	ENSMUSG00000040363	NonProperStrand	293	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-3.5433
chr6	124885788	124885826	protein_coding	Mlf2	utr3	ENSMUSG00000030120	ProperStrand	80	chr6	115757992	115758092	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	2	-8.1097
chr13	9833552	9833680	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr10	128020528	128020705	protein_coding	Erbb3	exon	ENSMUSG00000018166	ProperStrand	49	1	-5.3482
chr7	52382119	52382219	protein_coding-noncoding	Rpl13a	utr3	ENSMUSG00000074129	ProperStrand	106	chr6	77195102	77195118	protein_coding	Lrrtm1	exon	ENSMUSG00000060780	ProperStrand	19	1	-14.5076
chr5	121655016	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	chr11	116938557	116938748	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	13	-2.9274
chrX	107396011	107396027	LTR	RMER17A	ERVK	chrXRMER17A107395334	NonProperStrand	27	chr15	98350204	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-6.3283
chr7	74389416	74396544	protein_coding	Mef2a	exon	ENSMUSG00000030557	ProperStrand	18	chr9	40612076	40612107	snoRNA	ENSMUSG00000075924_Snord14d	.	ENSMUSG00000075924	ProperStrand	131	1	-14.1850
chr10	126482711	126482755	protein_coding	Mettl1	utr3	ENSMUSG00000006732	ProperStrand	5	chr4	131908245	131908353	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-6.0411
chr3	134151041	134151057	lincRNA	Gm16742	intron	ENSMUSG00000084777	NonProperStrand	42	chr1	162968441	162968494	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-6.7858
chr9	50816824	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	chr1	155316048	155316064	protein_coding	Dhx9	exon	ENSMUSG00000042699	ProperStrand	98	1	-10.8220
chr2	90292269	90292304	protein_coding	Ptprj	exon	ENSMUSG00000025314	ProperStrand	29	chr3	153573527	153573571	snoRNA	ENSMUSG00000064731_Snord45b	.	ENSMUSG00000064731	ProperStrand	205	1	-12.3195
chr2	131005220	131005236	protein_coding	Cenpb	exon	ENSMUSG00000068267	NonProperStrand	38	chr1	162965994	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-4.4652
chr9	78328105	78328205	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr17	13115522	13115568	protein_coding	Tcp1	exon	ENSMUSG00000068039	ProperStrand	116	1	-5.0454
chr5	31362303	31372754	protein_coding	Cad	exon	ENSMUSG00000013629	ProperStrand	260	chr9	15119713	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-1.2092
chr2	24825186	24827046	protein_coding	Wdr85	exon	ENSMUSG00000026975	ProperStrand	323	chr7	117189865	117189909	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-3.0164
chr12	110894556	110894617	snoRNA	ENSMUSG00000064417_SNORD113	.	ENSMUSG00000064417	ProperStrand	16	chr4	131908236	131908282	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-9.2689
chr17	32256213	32256314	lincRNA	Gm17276	intron	ENSMUSG00000090984	ProperStrand	1	chr16	23111450	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-inf
chr15	82980099	82980223	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr19	8798507	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-0.8409
chr6	143154357	143154457	protein_coding	Etnk1	utr3	ENSMUSG00000030275	ProperStrand	61	chr12	112779230	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-4.7441
chr2	58784889	58784906	protein_coding	Ccdc148	intron	ENSMUSG00000036641	ProperStrand	21	chr4	131908810	131908905	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.9128
chr9	114329489	114329579	protein_coding	Glb1	exon	ENSMUSG00000045594	ProperStrand	67	chr16	23110455	23110517	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-4.0568
chr13	84397423	84399811	protein_coding	Tmem161b	exon	ENSMUSG00000035762	ProperStrand	22	chr4	56910547	56910627	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-8.1142
chr13	68759738	68764669	protein_coding	Adcy2	exon	ENSMUSG00000021536	ProperStrand	237	chr2	166888979	166889021	snoRNA	ENSMUSG00000077515_SNORD12	.	ENSMUSG00000077515	ProperStrand	191	1	-8.2420
chr7	3656368	3657427	protein_coding	Rps9	exon	ENSMUSG00000006333	ProperStrand	87	chr17	22092011	22092068	protein_coding	Zfp942	intron	ENSMUSG00000071267	ProperStrand	2	1	-20.1717
chr7	134131876	134131956	protein_coding	Mvp	exon	ENSMUSG00000030681	ProperStrand	2	chr13	96100600	96100690	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	1	-15.5348
chr1	40826447	40826527	LTR	MTD	MaLR	chr1MTD40826345	ProperStrand	1	chr1	40826539	40826628	LTR	MTD	MaLR	chr1MTD40826530	NonProperStrand	1	1	-inf
chr1	178754159	178754175	protein_coding	Sdccag8	intron	ENSMUSG00000026504	ProperStrand	54	chr8	113571921	113573624	protein_coding	Aars	exon	ENSMUSG00000031960	ProperStrand	355	1	-9.9636
chr8	40681587	40681603	protein_coding	Msr1	intron	ENSMUSG00000025044	ProperStrand	138	chr9	120038553	120038608	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.6517
chr2	179918436	179918787	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr2	165205928	165205951	protein_coding	Zfp334	exon	ENSMUSG00000017667	ProperStrand	8	1	-13.8332
chr1	37465369	37465459	protein_coding	Inpp4a	utr3	ENSMUSG00000026113	ProperStrand	21	chr7	116663661	116663741	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.4437
chr8	74008400	74008417	protein_coding	Ano8	exon	ENSMUSG00000034863	NonProperStrand	171	chr17	13112450	13112512	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-2.6568
chrX	72354647	72354663	protein_coding	Dkc1	utr3	ENSMUSG00000031403	ProperStrand	89	chr10	90076969	90076990	protein_coding	Anks1b	intron	ENSMUSG00000058589	NonProperStrand	230	1	-9.8270
chrX	72214248	72214264	protein_coding-noncoding	Gab3	utr3	ENSMUSG00000032750	ProperStrand	420	chr11	68716720	68716771	protein_coding	Rpl26	exon	ENSMUSG00000060938	ProperStrand	130	1	-7.8709
chr10	62043610	62043633	protein_coding	Ddx21	utr3	ENSMUSG00000020075	ProperStrand	137	chr2	91436228	91436336	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	6	-inf
chr9	21536817	21553458	protein_coding	Ldlr	exon	ENSMUSG00000032193	ProperStrand	60	chr4	131908688	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	7	-11.3070
chr10	89252417	89252441	protein_coding	Uhrf1bp1l	intron	ENSMUSG00000019951	ProperStrand	28	chr14	122583469	122583512	protein_coding	Clybl	intron	ENSMUSG00000025545	ProperStrand	23	1	-16.6849
chr19	7052531	7052891	protein_coding	Fkbp2	exon	ENSMUSG00000056629	ProperStrand	18	chr2	32818810	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	7	-19.9139
chr10	76837261	76837278	protein_coding	Adarb1	intron	ENSMUSG00000020262	ProperStrand	15	chr19	8963030	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.8348
chr4	107056242	107062095	protein_coding	Tmem48	exon	ENSMUSG00000028614	ProperStrand	42	chr18	35716789	35716883	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-4.8567
chr11	62590602	62590630	snoRNA	ENSMUSG00000064692_SNORA67	.	ENSMUSG00000064692	ProperStrand	185	chr19	8799830	8799882	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	2	-4.9473
chr5	119178501	119178622	protein_coding	Med13l	exon	ENSMUSG00000018076	NonProperStrand	12	chrX	137641692	137641711	protein_coding	Col4a6	intron	ENSMUSG00000031273	NonProperStrand	3	1	-inf
chr18	42381213	42381261	protein_coding	Lars	exon	ENSMUSG00000024493	ProperStrand	69	chr4	137860865	137861081	protein_coding	Ddost	exon	ENSMUSG00000028757	ProperStrand	49	1	-13.4437
chr10	88110773	88110863	LTR	ORR1A0	MaLR	chr10ORR1A088110631	ProperStrand	1	chr3	20708247	20708327	LTR	MTA_Mm	MaLR	chr3MTA_Mm20707917	NonProperStrand	1	1	-inf
chr11	75546537	75546557	protein_coding	Ywhae	exon	ENSMUSG00000020849	ProperStrand	176	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-4.8759
chr16	88275090	88275180	protein_coding	Grik1	intron	ENSMUSG00000022935	ProperStrand	4	chr2	31461031	31461111	protein_coding	Fubp3	intron	ENSMUSG00000026843	ProperStrand	35	1	-inf
chr2	32488551	32488615	protein_coding	Ak1	intron	ENSMUSG00000026817	ProperStrand	33	chr2	158185627	158185666	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	5	-19.1318
chr7	25757546	25757630	protein_coding	Rabac1	utr5	ENSMUSG00000003380	ProperStrand	19	chr12	17552950	17553040	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-7.3736
chr18	78017883	78017953	protein_coding	Atp5a1	exon	ENSMUSG00000025428	ProperStrand	254	chr16	23111741	23111776	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-1.7993
chr2	146125208	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	chr10	23505149	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-1.4500
chr11	116535503	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr5	108334195	108336489	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	9	-2.9221
chr9	15120998	15121088	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	chr15	98350203	98350283	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-1.5916
chr17	46398130	46398372	protein_coding	Tjap1	exon	ENSMUSG00000012296	ProperStrand	11	chr15	101920327	101920344	protein_coding	Eif4b	exon	ENSMUSG00000058655	NonProperStrand	6	1	-19.1881
chr6	30162058	30162074	protein_coding	Ube2h	utr3	ENSMUSG00000039159	ProperStrand	96	chr9	15119631	15119692	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.8513
chr6	39473621	39473676	protein_coding	Dennd2a	utr5	ENSMUSG00000038456	ProperStrand	13	chr2	118611946	118611962	protein_coding	Disp2	exon	ENSMUSG00000040035	NonProperStrand	204	1	-13.9820
chr2	90854674	90854690	protein_coding	Celf1	utr3	ENSMUSG00000005506	NonProperStrand	28	chr18	35714211	35714262	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.8891
chr10	121015672	121015701	protein_coding	Tbk1	exon	ENSMUSG00000020115	ProperStrand	14	chr5	149143949	149144015	protein_coding	Slc7a1	utr3	ENSMUSG00000041313	ProperStrand	65	3	-inf
chr15	76534787	76534907	protein_coding	Recql4	exon	ENSMUSG00000033762	ProperStrand	18	chr1	162967520	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-9.5145
chr9	26837772	26837866	protein_coding	Ncapd3	utr5	ENSMUSG00000035024	ProperStrand	16	chr15	79913288	79913346	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-6.1593
chr3	24735006	24735024	SINE	RSINE1	B4	chr3RSINE124734918	NonProperStrand	1	chr19	5796318	5796368	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	1	-inf
chr5	68012850	68012890	protein_coding	Atp8a1	utr3	ENSMUSG00000037685	ProperStrand	20	chr2	130103751	130103812	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-10.6940
chr11	49698817	49698907	protein_coding	Mapk9	utr3	ENSMUSG00000020366	ProperStrand	20	chr16	23111389	23111469	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.0472
chr6	122679346	122679387	protein_coding	Slc2a3	utr3	ENSMUSG00000003153	ProperStrand	682	chr16	23109053	23109090	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-2.6614
chr5	86540320	86540377	protein_coding	Uba6	utr3	ENSMUSG00000035898	ProperStrand	17	chr15	34370545	34370627	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	4	-18.7070
chr12	4188637	4188717	protein_coding	Adcy3	intron	ENSMUSG00000020654	NonProperStrand	5	chr2	144091833	144091923	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	ProperStrand	549	1	-14.0482
chr16	85010684	85010705	protein_coding	App	intron	ENSMUSG00000022892	NonProperStrand	101	chr14	76247711	76247786	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-3.2076
chr2	156133602	156133692	protein_coding	Phf20	utr3	ENSMUSG00000038116	ProperStrand	60	chr9	120038552	120038632	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.0390
chr11	98555143	98555181	protein_coding	Psmd3	exon	ENSMUSG00000017221	ProperStrand	51	chr5	36958568	36958630	protein_coding	D5Ertd579e	exon	ENSMUSG00000029190	ProperStrand	43	3	-inf
chr11	95934317	95934364	protein_coding	Atp5g1	utr3	ENSMUSG00000006057	ProperStrand	9	chr11	69483136	69483198	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-6.0733
chr8	113578037	113578424	protein_coding	Aars	exon	ENSMUSG00000031960	NonProperStrand	8	chr7	29136634	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	NonProperStrand	27	1	-18.4209
chr19	5104996	5105076	protein_coding	Rab1b	intron	ENSMUSG00000024870	ProperStrand	133	chr12	17552960	17553050	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-3.5808
chr15	72932976	72955739	protein_coding	Eif2c2	exon	ENSMUSG00000036698	ProperStrand	154	chr11	97642952	97643091	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	15	-inf
chr18	43501940	43504773	protein_coding	Dpysl3	exon	ENSMUSG00000024501	ProperStrand	9	chr7	117189960	117190040	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-7.0617
chr4	117910485	117910537	protein_coding	Ptprf	exon	ENSMUSG00000033295	ProperStrand	337	chr12	58331566	58331582	protein_coding	Mipol1	utr5	ENSMUSG00000047022	ProperStrand	40	1	-10.6728
chr9	62696951	62698426	protein_coding	Cln6	exon	ENSMUSG00000032245	ProperStrand	34	chr14	76247745	76247825	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	12	-18.9835
chr6	25272074	25272091	LTR	MYSERV-int	ERVK	chr6MYSERV-int25271998	ProperStrand	12	chr6	115758101	115758120	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-8.7104
chr7	52382104	52382148	protein_coding	Rpl13a	exon	ENSMUSG00000074129	ProperStrand	269	chr5	121655029	121655154	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-2.3964
chr7	133726521	133726538	protein_coding	Cln3	exon	ENSMUSG00000030720	ProperStrand	87	chr11	6428108	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.5369
chr7	3278015	3278105	SINE	B1_Mur1	Alu	chr7B1_Mur13278033	NonProperStrand	1	chr7	3277867	3277957	SINE	B1_Mur4	Alu	chr7B1_Mur43277847	ProperStrand	1	1	-inf
chr4	140878169	140878241	protein_coding	Epha2	exon	ENSMUSG00000006445	ProperStrand	148	chr1	89681244	89681328	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	2	-6.2817
chr15	10408470	10408520	protein_coding	Brix1	exon	ENSMUSG00000022247	ProperStrand	32	chr1	51534341	51534382	protein_coding	Obfc2a	exon	ENSMUSG00000026107	ProperStrand	9	3	-19.2378
chr2	24825186	24827046	protein_coding	Wdr85	exon	ENSMUSG00000026975	ProperStrand	323	chr7	117189945	117189995	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-0.7470
chr18	56867992	56868082	protein_coding	Lmnb1	exon	ENSMUSG00000024590	ProperStrand	176	chr11	77825168	77825248	protein_coding	Phf12	intron	ENSMUSG00000037791	NonProperStrand	5	1	-16.2673
chr8	123096595	123096612	protein_coding	Gse1	exon	ENSMUSG00000031822	NonProperStrand	8	chr4	131908301	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-5.0428
chr8	3523339	3523773	protein_coding	Pnpla6	exon	ENSMUSG00000004565	ProperStrand	60	chr19	41616497	41616513	protein_coding	Lcor	intron	ENSMUSG00000025019	NonProperStrand	1	1	-inf
chr12	52739217	52739305	protein_coding	Strn3	intron	ENSMUSG00000020954	ProperStrand	10	chr7	116664802	116664892	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-5.9693
chr2	180986729	180986817	protein_coding	Gmeb2	utr3	ENSMUSG00000038705	ProperStrand	10	chr1	162965983	162966028	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-7.1350
chr2	90235293	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	31436465	31436482	LINE	Lx7	L1	chr8Lx731436390	ProperStrand	23	1	-6.3423
chr16	32246687	32246767	protein_coding	Fbxo45	exon	ENSMUSG00000035764	ProperStrand	19	chr5	108334251	108336490	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-7.1594
chr19	10629626	10629643	protein_coding	Tmem216	utr5	ENSMUSG00000024667	NonProperStrand	4	chr1	133708710	133708726	protein_coding	Pm20d1	exon	ENSMUSG00000042251	NonProperStrand	2	1	-inf
chr15	6777815	6777835	protein_coding	Osmr	intron	ENSMUSG00000022146	ProperStrand	6	chr15	34370616	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	4	-19.6467
chr15	32760880	32760900	LINE	Lx2A1	L1	chr15Lx2A132760594	ProperStrand	1	chr16	23110912	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr8	108467751	108467851	protein_coding	Slc12a4	utr3	ENSMUSG00000017765	ProperStrand	25	chr9	64023265	64023314	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	1	-10.2119
chr4	106237041	106237086	protein_coding	Dhcr24	exon	ENSMUSG00000034926	ProperStrand	94	chr1	162966001	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	4	-9.7919
chr4	33027334	33027353	protein_coding	Ankrd6	intron	ENSMUSG00000040183	ProperStrand	15	chr3	123210915	123210972	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-4.5915
chrX	148707300	148707375	protein_coding	Kdm5c	exon	ENSMUSG00000025332	ProperStrand	139	chr8	90298114	90298131	protein_coding	Zfp423	intron	ENSMUSG00000045333	NonProperStrand	44	3	-20.0904
chr3	36906012	36906102	protein_coding	4932438A13Rik	exon	ENSMUSG00000037270	ProperStrand	96	chr10	110918591	110918671	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-2.6103
chr9	78326915	78326968	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	1	-1.9800
chr12	72420556	72420572	lincRNA	4930474H06Rik	intron	ENSMUSG00000087109	ProperStrand	1	chr17	67624196	67624212	protein_coding	Ptprm	intron	ENSMUSG00000033278	ProperStrand	20	1	-inf
chr7	134850214	134850294	protein_coding-noncoding	Bcl7c	utr3	ENSMUSG00000030814	ProperStrand	1	chr7	134850039	134850129	protein_coding	Bcl7c	intron	ENSMUSG00000030814	ProperStrand	15	1	-inf
chr10	62271140	62302910	protein_coding	Tet1	utr3	ENSMUSG00000047146	ProperStrand	286	chr16	23111373	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	7	-2.0128
chr8	47661329	47661405	protein_coding	Ccdc111	utr3	ENSMUSG00000038225	ProperStrand	7	chr18	64112332	64112349	protein_coding	Wdr7	intron	ENSMUSG00000040560	NonProperStrand	180	1	-15.5298
chr2	90235313	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	154878363	154878380	protein_coding	Nmnat2	intron	ENSMUSG00000042751	ProperStrand	39	1	-5.2962
chr16	30601497	30601533	protein_coding	Fam43a	exon	ENSMUSG00000046546	ProperStrand	8	chr11	6428035	6428087	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-7.1562
chr8	74446729	74446745	protein_coding	Zfp617	intron	ENSMUSG00000066880	NonProperStrand	208	chr17	13112529	13112549	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-2.3238
chr5	108698334	108698424	protein_coding	Dr1	utr5	ENSMUSG00000029265	ProperStrand	11	chr10	23505200	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.1476
chr15	58884095	58884113	protein_coding	Mtss1	intron	ENSMUSG00000022353	NonProperStrand	51	chr8	73419716	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.4260
chr4	132530098	132530116	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	chr9	23211250	23211267	protein_coding	Bmper	exon	ENSMUSG00000031963	ProperStrand	16	1	-12.2866
chr10	6063958	6063976	protein_coding	Akap12	intron	ENSMUSG00000038587	ProperStrand	1008	chr9	15130936	15131005	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	2	-6.2530
chr10	79879959	79880062	protein_coding	Tcf3	exon	ENSMUSG00000020167	NonProperStrand	24	chr11	109994459	109994478	protein_coding	Abca9	intron	ENSMUSG00000041797	NonProperStrand	3	1	-inf
chr4	118050362	118050378	protein_coding	Szt2	exon	ENSMUSG00000033253	NonProperStrand	11	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-11.1946
chr14	60998023	60998039	protein_coding	Fam123a	exon	ENSMUSG00000021986	ProperStrand	13	chr5	108336363	108336409	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-7.9357
chr8	40681587	40681603	protein_coding	Msr1	intron	ENSMUSG00000025044	ProperStrand	138	chr15	79913298	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.1319
chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	chr3	85942723	85942779	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	1	-5.7130
chr11	114754613	114754630	protein_coding	Cd300a	exon	ENSMUSG00000034652	ProperStrand	7	chr16	23110897	23110957	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.4785
chr17	27698447	27700571	protein_coding	Hmga1	utr3	ENSMUSG00000046711	ProperStrand	180	chr4	131908687	131908893	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-1.4889
chr11	120439963	120440053	protein_coding	Arhgdia	utr3	ENSMUSG00000025132	ProperStrand	39	chr3	95980322	95980402	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-7.7173
chr2	42398548	42398564	protein_coding	Lrp1b	intron	ENSMUSG00000049252	NonProperStrand	39	chr4	131908302	131908402	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-3.7675
chr5	120577063	120577079	protein_coding	Rbm19	exon	ENSMUSG00000029594	ProperStrand	40	chr8	73419746	73419773	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.8776
chr4	145207056	145207106	protein_coding	Gm13212	intron	ENSMUSG00000078502	ProperStrand	4	chr16	23111452	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-6.3168
chrX	72214248	72214264	protein_coding-noncoding	Gab3	utr3	ENSMUSG00000032750	ProperStrand	420	chr5	121655016	121655097	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-0.7083
chr16	92577927	92577943	LINE	L1MA4	L1	chr16L1MA492577535	NonProperStrand	4	chrX	126608363	126608392	protein_coding	Diap2	exon	ENSMUSG00000034480	ProperStrand	34	1	-18.8058
chr8	114070410	114070510	protein_coding	Znrf1	intron	ENSMUSG00000033545	ProperStrand	13	chr16	23110968	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.3283
chr4	40751990	40752007	protein_coding	B4galt1	utr3	ENSMUSG00000028413	ProperStrand	25	chr19	8800422	8800478	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-5.2030
chr7	82292526	82292544	protein_coding	Sv2b	exon	ENSMUSG00000053025	ProperStrand	9	chr16	23110911	23110960	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.9939
chr9	30877317	30877372	protein_coding	Zbtb44	utr3	ENSMUSG00000047412	ProperStrand	68	chr4	131908718	131908808	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.0584
chr3	35725890	35725907	protein_coding	Atp11b	exon	ENSMUSG00000037400	NonProperStrand	18	chr16	23111724	23111814	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.0433
chr3	89635100	89635119	Low_complexity	GC_rich	Low_complexity	chr3GC_rich89635092	ProperStrand	2	chr17	34829753	34829776	protein_coding	Tnxb	intron	ENSMUSG00000033327	ProperStrand	36	1	-21.6672
chr5	115695897	115695944	protein_coding	Rnf10	exon	ENSMUSG00000041740	ProperStrand	95	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.4660
chr8	124080204	124080242	protein_coding	Fbxo31	exon	ENSMUSG00000031811	ProperStrand	9	chr5	74489640	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-7.5428
chr2	152717236	152717263	protein_coding	Tpx2	exon	ENSMUSG00000027469	ProperStrand	111	chr19	8800387	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	5	-11.3754
chr1	162967705	162967780	non_coding	Gas5	.	ENSMUSG00000053332	ProperStrand	144	chr11	62416593	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-3.5081
chr8	35782897	35782914	LINE	Lx8	L1	chr8Lx835782461	ProperStrand	25	chr7	117189863	117189909	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-7.9590
chr17	24360954	24360979	protein_coding	Ccnf	exon	ENSMUSG00000072082	ProperStrand	149	chr11	69483136	69483254	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-2.0953
chr1	158697575	158697591	LTR	ORR1A4	MaLR	chr1ORR1A4158697469	NonProperStrand	9	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-14.6575
chr16	33243121	33243187	protein_coding	Osbpl11	utr3	ENSMUSG00000022807	ProperStrand	31	chr3	123210854	123210891	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.2114
mmu-miR-6238	3	20	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr2	130103480	130103502	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-5.3288
chr2	120687420	120687510	protein_coding	Ubr1	utr3	ENSMUSG00000027272	ProperStrand	16	chr9	120038561	120038651	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.5625
chr2	173912607	173912624	protein_coding	Stx16	intron	ENSMUSG00000027522	ProperStrand	18	chr14	76247779	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-6.5333
chr4	130257744	130257770	protein_coding	Pum1	intron	ENSMUSG00000028580	ProperStrand	131	chr9	15119668	15119768	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-4.1171
chr6	44912626	44912706	LINE	L1Md_F	L1	chr6L1Md_F44912620	NonProperStrand	1	chr6	44912295	44912385	LINE	L1_Mus1	L1	chr6L1_Mus144912128	NonProperStrand	1	1	-inf
chr9	78023104	78023150	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr9	78326393	78327249	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	6	-4.1342
chr9	105444547	105444627	LTR	RMER12	ERVK	chr9RMER12105444456	NonProperStrand	1	chr9	105444810	105444900	LTR	RMER12	ERVK	chr9RMER12105444763	NonProperStrand	1	1	-inf
chr2	113942171	113942224	protein_coding	Aqr	intron	ENSMUSG00000040383	ProperStrand	70	chr5	121655057	121655099	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.4626
chr9	42727134	42727224	protein_coding	Grik4	intron	ENSMUSG00000032017	NonProperStrand	14	chr10	53283389	53283469	protein_coding	Mcm9	intron	ENSMUSG00000058298	ProperStrand	24	1	-18.1247
chr19	8799830	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	chr1	9932550	9932626	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	5	-4.0093
chr8	109193183	109193259	protein_coding	Cdh1	utr3	ENSMUSG00000000303	ProperStrand	283	chr18	75161561	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-4.1842
chr5	85766099	85766115	LINE	Lx6	L1	chr5Lx685766041	NonProperStrand	1	chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	1	-inf
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr7	29136528	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	11	-7.7704
chr6	90359164	90359223	protein_coding	Ccdc37	intron	ENSMUSG00000048794	NonProperStrand	1	chr16	23110883	23110973	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr16	91641602	91641914	protein_coding	Gart	exon	ENSMUSG00000022962	ProperStrand	200	chr7	149170855	149171339	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	3	-20.6336
chr2	130109497	130109513	protein_coding	Idh3b	exon	ENSMUSG00000027406	ProperStrand	146	chr18	73693110	73693139	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-3.8231
chr10	20080843	20080861	protein_coding	Fam54a	utr3	ENSMUSG00000019992	ProperStrand	232	chr7	38354919	38354935	protein_coding	Zfp536	exon	ENSMUSG00000043456	NonProperStrand	236	1	-7.8639
chr5	32523657	32523737	LINE	L2	L2	chr5L232523674	NonProperStrand	1	chr5	32524380	32524470	LTR	ORR1C1	MaLR	chr5ORR1C132524230	NonProperStrand	1	1	-inf
chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	chr12	17553062	17553087	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-0.7930
chr5	108333573	108333635	snoRNA	ENSMUSG00000064453_Snord21	.	ENSMUSG00000064453	ProperStrand	201	chr7	67123693	67123711	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	2	-11.4450
chr11	101645784	101645808	protein_coding-noncoding	Etv4	utr3	ENSMUSG00000017724	NonProperStrand	9	chr3	33713610	33713626	protein_coding	Ccdc39	exon	ENSMUSG00000027676	ProperStrand	106	1	-16.0450
chr2	90235304	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	65780337	65780757	protein_coding	Rpl9	exon	ENSMUSG00000047215	ProperStrand	113	2	-5.6140
chr7	12679040	12679120	LINE	L1_Mur1	L1	chr7L1_Mur112678930	ProperStrand	1	chr7	12679114	12679204	LINE	L1_Mus1	L1	chr7L1_Mus112679139	ProperStrand	1	1	-inf
chr19	36956212	36956230	protein_coding	Tnks2	exon	ENSMUSG00000024811	ProperStrand	133	chr5	23825941	23825957	protein_coding	Kcnh2	exon	ENSMUSG00000038319	ProperStrand	242	1	-8.9219
chr3	88159650	88162582	protein_coding	Smg5	exon	ENSMUSG00000001415	ProperStrand	70	chr11	6520317	6520458	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	1	-7.4100
chr15	78179508	78179525	protein_coding	Csf2rb	utr3	ENSMUSG00000071713	ProperStrand	16	chr18	35716832	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.5854
chr1	173327699	173330757	protein_coding	Arhgap30	exon	ENSMUSG00000048865	ProperStrand	6	chr5	121655039	121655129	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-8.3778
chr9	65049532	65049610	snRNA	ENSMUSG00000075930_U5	.	ENSMUSG00000075930	ProperStrand	175	chr1	162967512	162967541	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	4	-6.6093
chr15	98604924	98606960	protein_coding	Wnt10b	exon	ENSMUSG00000022996	NonProperStrand	189	chr1	89681353	89681396	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-3.2711
chr14	76160800	76160832	Low_complexity	GA-rich	Low_complexity	chr14GA-rich76160751	NonProperStrand	3	chr2	158182156	158182194	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	3	-inf
chr11	100212563	100212769	protein_coding	Hap1	exon	ENSMUSG00000006930	ProperStrand	21	chr5	108333578	108333658	snoRNA	ENSMUSG00000064453_Snord21	.	ENSMUSG00000064453	ProperStrand	201	1	-13.0175
chrX	35940137	35940227	LINE	Lx9	L1	chrXLx935939900	NonProperStrand	1	chrX	35940268	35940348	LINE	Lx9	L1	chrXLx935940150	NonProperStrand	1	1	-inf
chr11	106015819	106015901	protein_coding	Map3k3	utr3	ENSMUSG00000020700	ProperStrand	36	chr4	122968645	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	3	-16.4568
chr5	111085549	111085613	protein_coding	Ddx51	exon	ENSMUSG00000029504	ProperStrand	54	chr4	131865868	131865961	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-5.3889
chr2	26493406	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr4	103292427	103292443	protein_coding	Dab1	intron	ENSMUSG00000028519	ProperStrand	19	1	-8.5018
chr4	106920008	106920048	protein_coding	Lrrc42	exon	ENSMUSG00000028617	ProperStrand	28	chr1	162967514	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.9223
chr8	54676192	54676282	protein_coding	Neil3	intron	ENSMUSG00000039396	ProperStrand	14	chr4	131908749	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.6665
chr10	80078436	80078454	protein_coding	Scamp4	utr3	ENSMUSG00000078441	NonProperStrand	20	chr7	51505507	51505592	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	4	-inf
chr11	36140937	36140955	protein_coding	Odz2	intron	ENSMUSG00000049336	ProperStrand	106	chr9	15119631	15119697	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.6981
chr11	45723144	45723160	protein_coding	Clint1	utr3	ENSMUSG00000006169	NonProperStrand	273	chr17	39985193	39985569	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	2	-5.2704
chr19	6070738	6070756	protein_coding	1110014N23Rik	exon	ENSMUSG00000024797	ProperStrand	49	chr5	114416223	114416724	protein_coding	Ssh1	exon	ENSMUSG00000042121	ProperStrand	8	1	-17.9000
chr7	31928725	31928742	protein_coding	Gramd1a	exon	ENSMUSG00000001248	ProperStrand	24	chr11	4437599	4437650	protein_coding	Mtmr3	intron	ENSMUSG00000034354	ProperStrand	25	1	-16.8481
chr7	145532164	145532214	protein_coding	Tcerg1l	intron	ENSMUSG00000091002	ProperStrand	3	chr9	15118341	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-9.6743
chr15	76497005	76497025	protein_coding	Kifc2	intron	ENSMUSG00000004187	NonProperStrand	9	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.2544
chr15	75881854	75881903	protein_coding	Scrib	exon	ENSMUSG00000022568	ProperStrand	154	chr5	23830822	23830839	protein_coding	Kcnh2	exon	ENSMUSG00000038319	ProperStrand	242	1	-8.6294
chr15	62125211	62125301	lincRNA	Pvt1	intron	ENSMUSG00000072566	NonProperStrand	9	chr15	47909080	47909160	protein_coding	Csmd3	intron	ENSMUSG00000022311	NonProperStrand	25	1	-18.8861
chrX	7327654	7327671	protein_coding	Ccdc120	intron	ENSMUSG00000031150	NonProperStrand	10	chr4	131908752	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.3231
chr1	84813385	84813485	protein_coding	Trip12	intron	ENSMUSG00000026219	ProperStrand	248	chr11	48616641	48616706	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	1	-6.5232
chr2	154385958	154385978	protein_coding	E2f1	utr3	ENSMUSG00000027490	ProperStrand	28	chr18	35714160	35714276	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	7	-20.2327
chr3	153575117	153575168	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	chr12	60141422	60141508	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-2.3103
chr18	85049159	85049194	protein_coding	Cyb5	utr3	ENSMUSG00000024646	ProperStrand	12	chr16	23110972	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-4.4633
chr11	45958060	45958106	protein_coding	Adam19	utr3	ENSMUSG00000011256	ProperStrand	134	chr17	35087895	35087964	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-3.6727
chr1	51833053	51833097	protein_coding	Myo1b	exon	ENSMUSG00000018417	ProperStrand	31	chr9	120039533	120039623	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-4.5608
chr15	74394258	74394279	miRNA	AC117657.1	.	ENSMUSG00000093340	ProperStrand	10	chr7	109789611	109789627	protein_coding	Olfr554	exon	ENSMUSG00000073971	NonProperStrand	66	1	-16.7967
chr4	3762671	3762750	protein_coding	Rps20	utr5	ENSMUSG00000028234	NonProperStrand	2	chr9	15119956	15120046	protein_coding	Taf1d	intron	ENSMUSG00000031939	NonProperStrand	3	1	-inf
chr11	93811325	93813268	protein_coding	Gm20390	exon	ENSMUSG00000091228	ProperStrand	33	chr9	15119312	15119392	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-6.2841
chr14	33005026	33005094	protein_coding-noncoding	Timm23	utr3	ENSMUSG00000013701	ProperStrand	7	chr7	117166761	117166851	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-9.1717
chr8	80206657	80206673	lincRNA	4933431K23Rik	intron	ENSMUSG00000086451	ProperStrand	4	chr19	8963027	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-7.6308
chr11	3649570	3649587	protein_coding	Osbp2	intron	ENSMUSG00000020435	ProperStrand	60	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	2	-10.6514
chr16	4940862	4940907	protein_coding	Nudt16l1	utr3	ENSMUSG00000022516	ProperStrand	7	chr3	123210854	123210899	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-6.1463
chr3	104607118	104607208	protein_coding	Mov10	exon	ENSMUSG00000002227	ProperStrand	96	chr8	73419706	73419786	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.3119
chr17	34727872	34728116	protein_coding	Gpsm3	exon	ENSMUSG00000034786	NonProperStrand	2	chr16	23110840	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr7	30043528	30043594	protein_coding	Spint2	exon	ENSMUSG00000074227	ProperStrand	82	chr11	69481338	69481428	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-2.6469
chr9	120860230	120866652	protein_coding	Ctnnb1	exon	ENSMUSG00000006932	ProperStrand	214	chrX	71517822	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	2	-6.8363
chr13	73635127	73635146	protein_coding	Lpcat1	intron	ENSMUSG00000021608	ProperStrand	42	chr17	13115669	13115783	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	4	-20.4196
chr19	60604683	60604720	protein_coding	2700078E11Rik	utr3	ENSMUSG00000033417	ProperStrand	12	chr5	130300444	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-5.5517
chr5	117820863	117825887	protein_coding	Wsb2	exon	ENSMUSG00000029364	ProperStrand	15	chr8	32260335	32260362	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	2	-11.9233
chr10	79321768	79321868	protein_coding	Ptbp1	exon	ENSMUSG00000006498	ProperStrand	129	chr9	120037993	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-3.2727
chr5	100855902	100855973	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr2	90617929	90617958	protein_coding	Fnbp4	exon	ENSMUSG00000008200	ProperStrand	45	3	-16.2973
chr10	80569464	80569535	protein_coding	Map2k2	intron	ENSMUSG00000035027	ProperStrand	26	chr18	33954820	33954910	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-5.1001
chr10	80540732	80540748	protein_coding	Thop1	exon	ENSMUSG00000004929	NonProperStrand	8	chr18	35716785	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-9.9356
chr4	128574130	128574146	protein_coding	Trim62	exon	ENSMUSG00000041000	NonProperStrand	13	chr11	68887038	68887063	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-7.1671
chr11	114639744	114639761	protein_coding	Kif19a	exon	ENSMUSG00000010021	NonProperStrand	3	chr11	69483194	69483291	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-8.5256
chr5	76023103	76023164	protein_coding	Kit	intron	ENSMUSG00000005672	ProperStrand	58	chr11	68887040	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-4.2081
chr11	88798338	88802669	protein_coding	Scpep1	exon	ENSMUSG00000000278	ProperStrand	54	chr17	24857719	24857740	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.4751
chr4	144738568	144738608	protein_coding	Vps13d	exon	ENSMUSG00000020220	ProperStrand	59	chr15	34370545	34370625	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	3	-8.8844
chr13	59883504	59883574	protein_coding	Zcchc6	exon	ENSMUSG00000035248	ProperStrand	23	chr16	23110558	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-10.2999
chr11	83107805	83107833	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	3	-1.5173
chr6	42543791	42543807	protein_coding	Fam115e	exon	ENSMUSG00000018656	NonProperStrand	64	chr4	116827118	116827166	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-6.9120
chr5	122135695	122135725	protein_coding	Brap	utr3	ENSMUSG00000029458	ProperStrand	36	chr14	76247758	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-5.1554
chr8	95406969	95406985	protein_coding	Lpcat2	intron	ENSMUSG00000033192	ProperStrand	12	chr5	89104933	89105008	protein_coding	Grsf1	exon	ENSMUSG00000044221	ProperStrand	24	1	-18.2317
chr2	48092689	48092779	lincRNA	Gm13481	intron	ENSMUSG00000086353	NonProperStrand	36	chr15	96059371	96059451	lincRNA	2610037D02Rik	intron	ENSMUSG00000086809	NonProperStrand	5	1	-18.7969
chr5	139046998	139047015	protein_coding	Zfp68	utr3	ENSMUSG00000058291	ProperStrand	17	chr17	35299505	35299605	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-7.2784
chr4	117897482	117897636	protein_coding	Ptprf	exon	ENSMUSG00000033295	ProperStrand	337	chr1	88252836	88252876	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-3.3338
chr3	76603525	76603615	LINE	L1Md_F2	L1	chr3L1Md_F276602580	ProperStrand	1	chr7	54442479	54442559	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-inf
chr6	128322002	128322018	protein_coding	Foxm1	exon	ENSMUSG00000001517	NonProperStrand	66	chr9	120038467	120038552	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.8695
chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr6	124665249	124665417	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	7	-1.2197
chr11	117608546	117610559	protein_coding	Tnrc6c	exon	ENSMUSG00000025571	ProperStrand	51	chr10	23505152	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-2.7612
chr9	67800844	67801629	protein_coding	Vps13c	exon	ENSMUSG00000035284	ProperStrand	69	chr2	158182156	158182190	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-4.7328
chr17	32258481	32278210	protein_coding	Notch3	exon	ENSMUSG00000038146	ProperStrand	181	chr11	97642952	97643011	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-1.7157
chr11	95353970	95354002	protein_coding	Spop	utr3	ENSMUSG00000057522	ProperStrand	22	chr1	162968213	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	4	-inf
chr14	56159295	56159312	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	chr7	117189866	117189944	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	3	-9.5568
chr11	58762580	58762625	protein_coding	Hist3h2ba	exon	ENSMUSG00000056895	ProperStrand	10	chr10	23505150	23505232	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-10.8346
chr14	76247716	76247816	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	chr4	130305552	130305619	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	1	-1.2922
chr15	61889522	61889569	lincRNA	Pvt1	intron	ENSMUSG00000072566	ProperStrand	51	chr11	106362670	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-7.7290
chr7	73214335	73214402	protein_coding	Snrpa1	exon	ENSMUSG00000030512	ProperStrand	71	chr9	110845663	110845702	protein_coding	Tdgf1	exon	ENSMUSG00000032494	ProperStrand	218	1	-10.3876
chr11	67167096	67167112	protein_coding	Myh13	exon	ENSMUSG00000060180	ProperStrand	145	chr11	62416598	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-5.9398
chr12	3504409	3504437	protein_coding	Asxl2	utr3	ENSMUSG00000037486	ProperStrand	21	chr16	23111453	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-5.1714
chr4	83100728	83100766	protein_coding	Snapc3	intron	ENSMUSG00000028483	NonProperStrand	9	chr15	79908929	79908986	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	2	-14.9024
chr2	90235286	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	86232352	86232370	protein_coding	Haus6	intron	ENSMUSG00000038047	ProperStrand	21	1	-6.5250
chr6	134821203	134821231	protein_coding	Gpr19	intron	ENSMUSG00000032641	ProperStrand	27	chr1	181027187	181027205	protein_coding	Smyd3	intron	ENSMUSG00000055067	ProperStrand	231	1	-12.2257
chrX	7707452	7707469	protein_coding	Wdr13	exon	ENSMUSG00000031166	ProperStrand	8	chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-10.5674
chr11	100354875	100355230	protein_coding	Acly	exon	ENSMUSG00000020917	ProperStrand	183	chr10	110918549	110918629	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-1.5692
chr14	79881508	79881554	protein_coding	Elf1	intron	ENSMUSG00000036461	ProperStrand	15	chr7	52382787	52382832	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	4	-inf
chr9	58071228	58071244	protein_coding	Pml	intron	ENSMUSG00000036986	ProperStrand	45	chr15	97203472	97203532	protein_coding	Fam113b	intron	ENSMUSG00000044250	ProperStrand	10	1	-17.6220
chr2	153050783	153050799	protein_coding	Tspyl3	exon	ENSMUSG00000074671	ProperStrand	228	chr11	62416578	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-4.6881
chr11	102066156	102066216	protein_coding	Hdac5	exon	ENSMUSG00000008855	ProperStrand	45	chr1	37898095	37898111	protein_coding	Tsga10	exon	ENSMUSG00000060771	ProperStrand	79	1	-13.3409
chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	chr7	116663633	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-1.1792
chr4	131866243	131866292	lincRNA	Snhg12	exon	ENSMUSG00000086290	ProperStrand	178	chr7	50711861	50711961	protein_coding	Etfb	exon	ENSMUSG00000004610	ProperStrand	5	1	-16.2436
chr6	45494576	45494594	protein_coding	Cntnap2	intron	ENSMUSG00000039419	NonProperStrand	283	chr17	34020059	34020159	protein_coding	Kifc1	exon	ENSMUSG00000079553	ProperStrand	47	1	-10.6962
chr2	31456034	31458773	protein_coding	Fubp3	exon	ENSMUSG00000026843	ProperStrand	35	chr2	158185576	158185666	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-7.5604
chr5	105243450	105243489	protein_coding	Zfp951	exon	ENSMUSG00000072774	ProperStrand	3	chr9	15119731	15119764	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-8.7352
chr10	77050017	77052417	protein_coding	Pttg1ip	exon	ENSMUSG00000009291	NonProperStrand	1	chr4	131865932	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	NonProperStrand	39	1	-inf
chr17	75790277	75790293	protein_coding	Ltbp1	utr3	ENSMUSG00000001870	NonProperStrand	66	chr4	11118673	11118689	protein_coding	Ccne2	utr5	ENSMUSG00000028212	NonProperStrand	3	1	-20.1561
chr18	68038216	68038287	protein_coding	Cep192	exon	ENSMUSG00000024542	ProperStrand	59	chr16	23110472	23110562	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.4904
chr14	67606502	67606567	protein_coding	Bnip3l	utr3	ENSMUSG00000022051	ProperStrand	30	chr9	64022856	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-9.4201
chr3	136526736	136526753	protein_coding	Ppp3ca	intron	ENSMUSG00000028161	NonProperStrand	120	chr4	131865855	131865904	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.8227
chr15	98860801	98864603	protein_coding	Tuba1c	exon	ENSMUSG00000043091	ProperStrand	28	chr7	118219574	118219595	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-5.6481
chr9	78046175	78047304	protein_coding	Gsta4	exon	ENSMUSG00000032348	ProperStrand	82	chr19	8963129	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.7714
chr3	95543947	95544027	protein_coding	Tars2	utr3	ENSMUSG00000028107	ProperStrand	26	chr11	55296220	55296310	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-7.8500
chr2	90235300	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr14	28272978	28272994	protein_coding	D14Abb1e	exon	ENSMUSG00000040651	ProperStrand	49	1	-4.8520
chr11	87240282	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	chr19	8799052	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-3.6188
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr10	62802344	62802360	protein_coding	Sirt1	intron	ENSMUSG00000020063	NonProperStrand	116	3	-10.9975
chr17	24837876	24837892	protein_coding	Tbl3	exon	ENSMUSG00000040688	ProperStrand	42	chr4	131908697	131908752	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.7439
chr1	59600637	59600656	protein_coding	Gm973	intron	ENSMUSG00000047361	NonProperStrand	13	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-6.5816
chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr2	144087324	144087440	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	4	-6.3528
chr2	17949370	17949386	protein_coding	A930004D18Rik	utr5	ENSMUSG00000054057	NonProperStrand	1	chr18	73693171	73693190	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-inf
chr3	38878593	38878609	protein_coding	Fat4	exon	ENSMUSG00000046743	NonProperStrand	13	chr11	98878344	98878460	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-9.3740
chr9	120039588	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	chr13	23399497	23399533	tRNA	tRNA98-ValCAC	.	1602362	ProperStrand	17	1	-5.7441
chr8	41597060	41597077	protein_coding	Cnot7	utr5	ENSMUSG00000031601	ProperStrand	19	chr16	23111372	23111470	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-8.1189
chr6	83557346	83557446	LINE	Lx7	L1	chr6Lx783556937	ProperStrand	2	chr6	83556848	83556911	LTR	RLTR12B	ERVK	chr6RLTR12B83556419	ProperStrand	2	2	-inf
chr2	105012751	105012769	protein_coding	Wt1	utr3	ENSMUSG00000016458	NonProperStrand	338	chr12	17552949	17553089	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	2	-3.5505
chr3	89891419	89891620	protein_coding	Tpm3	exon	ENSMUSG00000027940	ProperStrand	55	chr10	23506278	23506321	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-7.1205
chr1	92689614	92689630	protein_coding	Col6a3	exon	ENSMUSG00000048126	ProperStrand	79	chr11	62416596	62416626	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-4.6354
chr7	4875903	4875970	protein_coding	Nat14	exon	ENSMUSG00000035285	ProperStrand	3	chr11	69483183	69483274	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-14.4332
chr1	88247739	88247799	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	chr16	43886794	43886894	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	2	-1.5423
chr12	88811784	88811884	protein_coding	Snw1	intron	ENSMUSG00000021039	ProperStrand	36	chr5	130300474	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.4201
chr4	132086500	132086541	protein_coding	Atpif1	utr3	ENSMUSG00000054428	ProperStrand	15	chr8	73419657	73419757	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-5.7918
chr11	82123199	82123216	SINE	MIR3	MIR	chr11MIR382123070	NonProperStrand	8	chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-10.5674
chr11	109081339	109081355	SINE	B3A	B2	chr11B3A109081325	ProperStrand	5	chr14	31827478	31827515	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-12.0933
chr7	126929655	126929698	protein_coding	Eri2	exon	ENSMUSG00000030929	ProperStrand	6	chr9	120038575	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-7.6033
chr2	53050023	53050045	protein_coding	Prpf40a	intron	ENSMUSG00000061136	NonProperStrand	1	chr10	23505149	23505277	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-inf
chr5	42236542	42236622	LTR	MTC	MaLR	chr5MTC42236226	ProperStrand	1	chr5	42237041	42237131	SINE	PB1D9	Alu	chr5PB1D942237033	NonProperStrand	1	1	-inf
chr8	125016581	125016605	protein_coding	Fam38a	exon	ENSMUSG00000014444	ProperStrand	132	chr5	137463215	137463231	protein_coding	Znhit1	intron	ENSMUSG00000059518	ProperStrand	4	1	-17.3432
chr3	88140526	88140545	protein_coding	Smg5	intron	ENSMUSG00000001415	ProperStrand	70	chr7	117189865	117189953	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.0537
chr8	87426788	87426805	protein_coding	Klf1	exon	ENSMUSG00000054191	NonProperStrand	70	chr7	117189864	117189943	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-5.9058
chr9	55057284	55061717	protein_coding	Fbxo22	exon	ENSMUSG00000032309	ProperStrand	79	chr19	8963024	8963080	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.8294
chr14	99473491	99473581	protein_coding	6720463M24Rik	utr3	ENSMUSG00000022070	ProperStrand	23	chr5	130300436	130300516	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.2653
chr11	114533077	114533124	protein_coding	Rpl38	exon	ENSMUSG00000057322	ProperStrand	29	chr10	23505152	23505185	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-4.2149
chr7	38354919	38354935	protein_coding	Zfp536	exon	ENSMUSG00000043456	NonProperStrand	236	chr7	52381737	52381759	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-4.8860
chr1	153208656	153208672	protein_coding	Ivns1abp	exon	ENSMUSG00000023150	ProperStrand	51	chr6	29324611	29324677	protein_coding	Calu	utr3	ENSMUSG00000029767	ProperStrand	47	1	-14.1433
chr1	84692463	84692479	miRNA	Mir5126	.	ENSMUSG00000093254	ProperStrand	15	chr8	13876162	13876226	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-9.9483
chr7	106631306	106631396	snoRNA	ENSMUSG00000065822_Snord15a	.	ENSMUSG00000065822	ProperStrand	128	chr18	33954874	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-2.1777
chr8	24022295	24022326	protein_coding	Myst3	exon	ENSMUSG00000031540	ProperStrand	111	chr5	121655016	121655097	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	3	-6.8808
chr17	25296587	25296603	protein_coding	Clcn7	exon	ENSMUSG00000036636	ProperStrand	94	chr6	71832625	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-4.7402
chr2	69709262	69709284	protein_coding	Ssb	utr3	ENSMUSG00000068882	ProperStrand	37	chr8	98270028	98270082	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	2	-10.5232
chr12	88303044	88303124	protein_coding	2310044G17Rik	exon	ENSMUSG00000034157	ProperStrand	48	chr10	80291494	80291658	protein_coding	Oaz1	exon	ENSMUSG00000035242	ProperStrand	49	1	-14.1744
chr12	83541822	83541904	protein_coding	Sipa1l1	exon	ENSMUSG00000042700	ProperStrand	84	chr4	131865390	131865458	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-3.3783
chr11	120672361	120672403	protein_coding	Fasn	exon	ENSMUSG00000025153	ProperStrand	298	chr19	8799401	8799430	snoRNA	ENSMUSG00000065280_SNORD28	.	ENSMUSG00000065280	ProperStrand	269	1	-7.1085
chr17	13115738	13115783	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	chr1	162968212	162968273	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-1.5376
chr9	101115002	101115018	protein_coding	Ppp2r3a	exon	ENSMUSG00000043154	ProperStrand	4	chr5	121655016	121655099	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-15.2267
chr17	66844480	66844596	protein_coding	Rab12	utr3	ENSMUSG00000023460	ProperStrand	12	chr3	96365431	96365449	protein_coding	Txnip	utr3	ENSMUSG00000038393	ProperStrand	172	1	-14.4778
chr18	36760508	36771532	protein_coding	Ankhd1	utr5	ENSMUSG00000024483	ProperStrand	56	chr5	121655032	121655104	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-6.5392
chr11	60545218	60545308	protein_coding	Smcr7	exon	ENSMUSG00000018599	ProperStrand	6	chr2	158185534	158185597	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	3	-19.9204
chr19	10058694	10058799	protein_coding	Fth1	exon	ENSMUSG00000024661	ProperStrand	75	chr9	59163556	59163599	protein_coding	Adpgk	utr3	ENSMUSG00000025236	ProperStrand	19	2	-inf
chr15	77597977	77597993	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr17	35089182	35089214	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-1.4812
chr16	11144153	11144277	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr2	29992883	29992900	protein_coding	Tbc1d13	exon	ENSMUSG00000039678	NonProperStrand	2	1	-18.2639
chr12	72085596	72085676	protein_coding-noncoding	Psma3	utr5	ENSMUSG00000060073	NonProperStrand	1	chr12	72085232	72085322	protein_coding	Psma3	intron	ENSMUSG00000060073	NonProperStrand	2	1	-inf
chr17	56759666	56759719	protein_coding	Lonp1	exon	ENSMUSG00000041168	ProperStrand	83	chr11	68887033	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-3.5382
chr4	133909100	133909146	protein_coding	Slc30a2	utr3	ENSMUSG00000028836	ProperStrand	3	chr7	116663701	116663768	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-8.5982
chr1	89091564	89092064	protein_coding	Chrnd	exon	ENSMUSG00000026251	ProperStrand	32	chr1	162965528	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.4550
chr6	131330312	131330424	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	ProperStrand	408	chr8	73419655	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	4	-2.5536
chr4	154624313	154624333	protein_coding	2610002J02Rik	utr5	ENSMUSG00000073684	ProperStrand	18	chr3	123210849	123210907	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-7.1461
chr16	23111751	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	chr1	59749360	59749401	snoRNA	ENSMUSG00000077358_SNORD70	.	ENSMUSG00000077358	ProperStrand	63	6	-11.7619
chr17	34089229	34089254	protein_coding	Rps18	exon	ENSMUSG00000008668	ProperStrand	111	chr19	8800355	8800445	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-4.3040
chr14	20600524	20608919	protein_coding	Nid2	exon	ENSMUSG00000021806	ProperStrand	372	chr17	35299515	35299595	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-1.5683
chr10	126434489	126434589	protein_coding	Ctdsp2	utr3	ENSMUSG00000078429	ProperStrand	74	chr17	35299506	35299565	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-4.3756
chr8	13416897	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr2	138188029	138188045	protein_coding	Btbd3	intron	ENSMUSG00000062098	NonProperStrand	121	1	-5.0816
chr15	73416617	73416633	protein_coding	Slc45a4	exon	ENSMUSG00000079020	ProperStrand	127	chr11	106362568	106362609	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-5.9222
chr7	88427755	88427779	protein_coding	Pde8a	exon	ENSMUSG00000025584	ProperStrand	25	chr9	15119651	15119741	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.2372
chr11	48615207	48615250	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	chr9	120039999	120040179	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	1	-6.0385
chr2	172830730	172830784	protein_coding	Rae1	intron	ENSMUSG00000027509	ProperStrand	38	chr19	59299960	59299976	protein_coding	Kcnk18	exon	ENSMUSG00000040901	ProperStrand	12	1	-17.6232
chr13	120263141	120263172	protein_coding	4833420G17Rik	intron	ENSMUSG00000062822	ProperStrand	49	chr4	131908689	131908800	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.5109
chr7	147172356	147172637	protein_coding	Adam8	exon	ENSMUSG00000025473	NonProperStrand	5	chr17	24856664	24856754	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-11.5674
chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	chr17	39985349	39985448	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	2	-1.3167
chr4	127003699	127003796	protein_coding	Gjb3	exon	ENSMUSG00000042367	ProperStrand	4	chr11	55296256	55296276	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-11.8259
chr16	10088452	10088469	LTR	RMER10B	ERVL	chr16RMER10B10088331	NonProperStrand	14	chrX	56446563	56446582	protein_coding	Fgf13	intron	ENSMUSG00000031137	ProperStrand	39	1	-17.1034
chrX	107396011	107396027	LTR	RMER17A	ERVK	chrXRMER17A107395334	NonProperStrand	27	chr5	77710888	77710942	protein_coding	Rest	exon	ENSMUSG00000029249	ProperStrand	136	1	-13.2873
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr8	26827320	26827337	protein_coding	Whsc1l1	utr3	ENSMUSG00000054823	NonProperStrand	17	1	-9.4690
chr17	4082160	4082233	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr13	95200292	95200392	protein_coding	Ap3b1	intron	ENSMUSG00000021686	ProperStrand	96	1	-9.0228
chr8	113578519	113578939	protein_coding	Aars	exon	ENSMUSG00000031960	ProperStrand	355	chr2	121176333	121176349	protein_coding	Ppip5k1	exon	ENSMUSG00000033526	ProperStrand	85	1	-9.0532
chr11	57874941	57874957	protein_coding	Larp1	utr3	ENSMUSG00000037331	ProperStrand	201	chr11	87240276	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	1	-8.5700
chr16	19538504	19538594	LINE	L1_Mus1	L1	chr16L1_Mus119538317	NonProperStrand	1	chr3	159566754	159566844	protein_coding	Wls	intron	ENSMUSG00000028173	ProperStrand	4	1	-inf
chr13	55755831	55755847	protein_coding	Ddx46	intron	ENSMUSG00000021500	ProperStrand	87	chr12	106269445	106269558	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-3.4482
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	4	-13.1628
chr4	82920747	82920791	protein_coding	Ttc39b	intron	ENSMUSG00000038172	ProperStrand	78	chr7	116663655	116663745	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	4	-7.8403
chr10	76516105	76516920	protein_coding	Col18a1	exon	ENSMUSG00000001435	ProperStrand	287	chr3	88787051	88787067	protein_coding	Ash1l	exon	ENSMUSG00000028053	NonProperStrand	50	3	-19.2804
chr7	108971290	108971306	protein_coding	Inppl1	utr3	ENSMUSG00000032737	ProperStrand	272	chr2	119040704	119040722	protein_coding	Zfyve19	exon	ENSMUSG00000068580	ProperStrand	1	1	-inf
chr13	93480904	93480929	protein_coding	Serinc5	utr3	ENSMUSG00000021703	ProperStrand	57	chr1	63225579	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-6.7698
chr12	86338246	86338263	protein_coding	Ylpm1	exon	ENSMUSG00000021244	ProperStrand	100	chr18	33954842	33954943	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-4.5485
chr9	50816824	50816841	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	chr8	74446729	74446745	protein_coding	Zfp617	intron	ENSMUSG00000066880	NonProperStrand	208	1	-9.3161
chr19	46144247	46145835	protein_coding	Pprc1	exon	ENSMUSG00000055491	ProperStrand	143	chr19	8799585	8799646	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	2	-8.3316
chr15	103183679	103184008	protein_coding	Itga5	exon	ENSMUSG00000000555	ProperStrand	28	chr18	33954817	33954897	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-4.9550
chr7	88068218	88068266	protein_coding-noncoding	Sec11a	utr3	ENSMUSG00000025724	ProperStrand	1	chr17	47952964	47952983	protein_coding	Mdfi	exon	ENSMUSG00000032717	ProperStrand	4	1	-inf
chr2	129998666	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr11	104530720	104530750	protein_coding	Itgb3	utr3	ENSMUSG00000020689	ProperStrand	6	1	-12.8664
chr1	159816638	159816655	LTR	MLT1H2	MaLR	chr1MLT1H2159816576	ProperStrand	14	chr10	70847157	70847178	protein_coding	Ipmk	utr3	ENSMUSG00000060733	ProperStrand	22	1	-18.3932
chr2	90235297	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	36088430	36090978	protein_coding	Gpatch1	exon	ENSMUSG00000063808	ProperStrand	6	1	-9.1372
chrX	70918727	70918776	protein_coding	Slc6a8	utr5	ENSMUSG00000019558	ProperStrand	47	chr6	29119929	29119945	protein_coding	Prrt4	exon	ENSMUSG00000079654	NonProperStrand	18	1	-16.2584
chr2	91314972	91315366	protein_coding	Lrp4	exon	ENSMUSG00000027253	ProperStrand	16	chr8	73419683	73419773	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-9.3231
chr16	3708202	3708218	protein_coding	Mefv	exon	ENSMUSG00000022534	ProperStrand	1	chr1	90161559	90161603	protein_coding	Hjurp	utr3	ENSMUSG00000044783	ProperStrand	110	1	-inf
chr3	90210131	90210147	protein_coding	Ints3	exon	ENSMUSG00000027933	NonProperStrand	7	chr7	29136525	29136570	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-6.5022
chr5	92730863	92730894	protein_coding	Sdad1	exon	ENSMUSG00000029415	ProperStrand	63	chr9	120037980	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-4.6121
chr10	72437415	72437431	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr8	32260360	32260424	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	2	-1.3149
chr19	53706044	53706105	protein_coding	Smc3	exon	ENSMUSG00000024974	ProperStrand	61	chr16	23110971	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-0.7762
chr11	50198171	50198675	protein_coding	Hnrnph1	exon	ENSMUSG00000007850	ProperStrand	49	chr5	74489645	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-4.1589
chr1	133141546	133141562	protein_coding	Rassf5	exon	ENSMUSG00000026430	ProperStrand	73	chr7	52382237	52382292	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-7.8915
chr4	86500757	86500818	protein_coding	Rps6	exon	ENSMUSG00000028495	ProperStrand	263	chr14	33005138	33005209	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-1.4698
chrX	108504735	108504764	protein_coding	Rps6ka6	exon	ENSMUSG00000025665	ProperStrand	17	chr16	23110967	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-3.4874
chr6	91004676	91004692	protein_coding	Nup210	intron	ENSMUSG00000030091	NonProperStrand	22	chr2	26494773	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.0039
chr2	4805496	4805586	protein_coding	Sephs1	exon	ENSMUSG00000026662	ProperStrand	20	chr16	23111694	23111774	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.8417
mmu-miR-1291	0	26	miRNA	mmu-miR-1291	.	mmu-miR-1291	ProperStrand	103	chr4	131865856	131865946	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.0058
chr12	66178115	66178143	protein_coding	Fancm	utr5	ENSMUSG00000055884	ProperStrand	16	chr9	114434211	114434227	protein_coding	Trim71	exon	ENSMUSG00000079259	NonProperStrand	11	1	-18.9924
chr10	80829649	80829691	protein_coding	Fzr1	utr3	ENSMUSG00000020235	ProperStrand	26	chr7	148634782	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-5.6034
chr1	24620969	24621475	protein_coding	Gm10925	intron	ENSMUSG00000090378	ProperStrand	320	chr5	130300460	130300553	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-0.7730
chr2	90235293	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	30972208	30972271	protein_coding	Capns1	utr3	ENSMUSG00000001794	ProperStrand	35	2	-9.0354
chr2	129998657	129998716	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr4	131865855	131865988	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	14	-2.4713
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr16	20171282	20174574	protein_coding	Yeats2	exon	ENSMUSG00000041215	ProperStrand	21	3	-18.6010
chr7	133437680	133437721	protein_coding	Sbk1	utr3	ENSMUSG00000042978	ProperStrand	24	chr14	93688407	93688424	protein_coding	Pcdh9	intron	ENSMUSG00000055421	ProperStrand	59	1	-15.2067
chr5	116011202	116011239	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	chr2	181316563	181316579	protein_coding	Uckl1	exon	ENSMUSG00000089917	ProperStrand	142	1	-8.4241
chr4	129192468	129192567	protein_coding	Marcksl1	utr3	ENSMUSG00000047945	ProperStrand	52	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.6097
chr11	69559504	69559604	protein_coding	Polr2a	exon	ENSMUSG00000005198	ProperStrand	200	chr7	117189996	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-2.5572
chr1	138049390	138049809	protein_coding	Kif21b	exon	ENSMUSG00000041642	ProperStrand	77	chr12	88778635	88778722	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-6.0056
chr3	94938148	94938208	protein_coding	Lysmd1	utr5	ENSMUSG00000053769	ProperStrand	8	chr9	15119968	15120012	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	2	-17.9682
chr14	104867117	104867186	protein_coding	Pou4f1	utr5	ENSMUSG00000048349	ProperStrand	5	chr16	23110961	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr10	49845171	49845188	LINE	L1VL4	L1	chr10L1VL449844774	NonProperStrand	17	chr2	90235286	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	1	-6.9523
chr5	34087808	34087824	protein_coding	Letm1	exon	ENSMUSG00000005299	ProperStrand	21	chr4	131908300	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.1622
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr4	56910496	56910584	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	2	-4.2826
chr2	5151716	5151744	protein_coding	Ccdc3	utr3	ENSMUSG00000026676	ProperStrand	6	chr12	88488443	88496424	protein_coding	Pomt2	exon	ENSMUSG00000034126	NonProperStrand	331	1	-14.6395
chr9	19461993	19462196	LINE	L1Md_A	L1	chr9L1Md_A19461964	NonProperStrand	28	chr7	110699293	110699388	protein_coding	Olfr613	utr5	ENSMUSG00000078624	ProperStrand	16	2	-19.2864
chr17	35189624	35189649	protein_coding	Clic1	intron	ENSMUSG00000007041	NonProperStrand	4	chr18	65638002	65638090	protein_coding	Malt1	utr3	ENSMUSG00000032688	ProperStrand	6	3	-19.4134
chr4	140121137	140121153	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	chr5	37452739	37452758	protein_coding	Jakmip1	intron	ENSMUSG00000063646	ProperStrand	21	1	-13.7939
chr14	76247105	76247162	protein_coding	Tpt1	exon	ENSMUSG00000060126	ProperStrand	236	chr5	111121108	111121198	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-3.7953
chr11	120443321	120443416	SINE	B1_Mur4	Alu	chr11B1_Mur4120443296	ProperStrand	6	chr2	26768393	26768433	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	6	-inf
chr10	33872045	33872092	protein_coding	Dse	exon	ENSMUSG00000039497	ProperStrand	4	chr11	62418057	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-11.1873
chr13	110231347	110231365	protein_coding	Pde4d	intron	ENSMUSG00000021699	ProperStrand	92	chr5	115777274	115777339	protein_coding	Srsf9	utr5	ENSMUSG00000029538	ProperStrand	19	1	-14.7927
chr7	111381690	111381746	protein_coding	Trim6	utr3	ENSMUSG00000072244	ProperStrand	40	chr4	3762227	3762260	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	1	-10.3055
chr6	125112116	125112289	protein_coding	Gapdh	exon	ENSMUSG00000057666	ProperStrand	356	chr8	32260335	32260424	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-1.5195
chr17	12875863	12875934	protein_coding	Igf2r	utr3	ENSMUSG00000023830	ProperStrand	151	chr13	54723202	54723218	protein_coding	Faf2	exon	ENSMUSG00000025873	ProperStrand	90	1	-10.6462
chr9	72597124	72597140	protein_coding	Nedd4	utr3	ENSMUSG00000032216	ProperStrand	308	chr4	131866238	131866292	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-1.0165
chr2	119453317	119453417	protein_coding	Nusap1	exon	ENSMUSG00000027306	NonProperStrand	4	chr1	162966190	162966256	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	NonProperStrand	4	2	-inf
chr1	107908347	107908364	protein_coding	Zcchc2	exon	ENSMUSG00000038866	NonProperStrand	7	chr18	33954816	33954911	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	3	-17.8941
chr15	12191624	12193484	protein_coding	Mtmr12	exon	ENSMUSG00000039458	ProperStrand	16	chr11	6428121	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.7293
chr17	56742306	56742970	protein_coding	Safb	utr3	ENSMUSG00000071054	NonProperStrand	2	chr1	88247781	88247816	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	NonProperStrand	6	2	-inf
chr3	97454602	97454618	protein_coding	Fmo5	exon	ENSMUSG00000028088	ProperStrand	8	chr11	62416599	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-9.2486
chr2	32818840	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	chr1	9932550	9932591	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-0.7717
chr19	44031033	44031123	protein_coding	Cpn1	exon	ENSMUSG00000025196	ProperStrand	11	chr7	116664811	116664891	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-5.7738
chr7	25673399	25673417	protein_coding	Rps19	exon	ENSMUSG00000040952	ProperStrand	101	chr4	122970466	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-6.3824
chr10	56424895	56424985	LINE	L1Md_A	L1	chr10L1Md_A56420782	ProperStrand	1	chr18	35716764	35716844	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-inf
chr15	98683865	98683945	protein_coding	Mll2	exon	ENSMUSG00000048154	ProperStrand	170	chr5	108336400	108336490	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-2.9422
chr7	125879509	125879564	protein_coding	6330503K22Rik	utr3	ENSMUSG00000033904	ProperStrand	25	chr15	79908930	79908971	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	2	-11.6208
chr6	134594348	134594365	protein_coding	Loh12cr1	exon	ENSMUSG00000042992	ProperStrand	16	chr1	89673648	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-5.8062
chr10	83035114	83036552	protein_coding	A230046K03Rik	exon	ENSMUSG00000034560	ProperStrand	41	chr3	32830607	32832081	protein_coding	Usp13	exon	ENSMUSG00000056900	ProperStrand	15	1	-16.9936
chr4	131866152	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	NonProperStrand	19	chr17	35087941	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	NonProperStrand	2	1	-inf
chr15	79200445	79200504	protein_coding	Tmem184b	intron	ENSMUSG00000009035	ProperStrand	37	chr8	13416894	13416912	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	2	-11.9104
chr9	57001055	57001155	LTR	MLT1B	MaLR	chr9MLT1B57000991	NonProperStrand	1	chr12	31974214	31974263	protein_coding	Lamb1	exon	ENSMUSG00000002900	ProperStrand	87	1	-inf
chr6	100184037	100184055	protein_coding	Rybp	intron	ENSMUSG00000072872	NonProperStrand	7	chr4	131908256	131908802	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-5.3201
chr7	117166761	117166857	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	chr19	8800084	8800148	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	7	-5.8972
chr16	18303885	18303965	protein_coding-noncoding	D16H22S680E	utr3	ENSMUSG00000013539	ProperStrand	1	chr16	18303307	18303397	protein_coding	D16H22S680E	intron	ENSMUSG00000013539	ProperStrand	2	1	-inf
chr9	108396838	108397144	protein_coding	Usp19	exon	ENSMUSG00000006676	ProperStrand	57	chr8	98269996	98270076	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-5.6419
chr2	63936035	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr13	23528224	23528284	tRNA	tRNA103-LysCTT	.	53254	ProperStrand	180	2	-9.2759
chr8	108233711	108233730	protein_coding	4933405L10Rik	exon	ENSMUSG00000013158	ProperStrand	94	chr13	51743567	51743662	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-5.9737
chr19	46471706	46471723	protein_coding	Sufu	exon	ENSMUSG00000025231	NonProperStrand	10	chr7	132611801	132611853	protein_coding	Nsmce1	exon	ENSMUSG00000030750	ProperStrand	5	1	-19.5370
chr15	54893792	54894559	protein_coding	Taf2	exon	ENSMUSG00000037343	ProperStrand	18	chr18	35716687	35716761	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-7.3288
chr3	88847109	88847143	protein_coding	Ash1l	exon	ENSMUSG00000028053	ProperStrand	30	chr19	8798742	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	2	-10.0268
chr7	117189863	117189920	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr12	109460710	109460726	protein_coding	Ccdc85c	intron	ENSMUSG00000084883	ProperStrand	157	1	-4.3448
chr2	4544718	4544734	protein_coding	Prpf18	utr3	ENSMUSG00000039449	NonProperStrand	66	chr7	29136525	29136565	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.2056
chr4	130169510	130169596	protein_coding	Nkain1	utr3	ENSMUSG00000078532	ProperStrand	45	chr5	74489642	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-4.3209
chr10	75963856	75964005	protein_coding	Mcm3ap	exon	ENSMUSG00000001150	ProperStrand	95	chr11	69483189	69483279	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	5	-8.8936
chr10	53760814	53760830	protein_coding	Man1a	intron	ENSMUSG00000003746	NonProperStrand	8	chr7	117189893	117189922	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-7.3098
chr2	13496497	13496513	protein_coding	Vim	exon	ENSMUSG00000026728	NonProperStrand	2	chr18	33954819	33954911	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	NonProperStrand	24	1	-inf
chr12	103802859	103802974	protein_coding	Chga	utr3	ENSMUSG00000021194	ProperStrand	3	chr1	155287316	155287355	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	1	-15.3370
chr2	167836657	167836679	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	chr11	21139426	21139453	protein_coding	Vps54	intron	ENSMUSG00000020128	ProperStrand	15	1	-14.9506
chr11	85654391	85654411	protein_coding	Tbx2	exon	ENSMUSG00000000093	NonProperStrand	14	chr16	57391769	57391795	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	1	-10.7462
chr3	94250565	94250598	protein_coding	Mrpl9	exon	ENSMUSG00000028140	ProperStrand	4	chr17	24857716	24857806	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-7.6570
chr4	109608108	109608210	protein_coding	Faf1	exon	ENSMUSG00000010517	ProperStrand	29	chr11	6255060	6255078	protein_coding	Ogdh	exon	ENSMUSG00000020456	ProperStrand	42	3	-20.8546
chr4	98122606	98122659	protein_coding	Inadl	intron	ENSMUSG00000061859	ProperStrand	21	chr18	33954818	33954908	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	3	-12.9888
chr19	43579408	43579425	protein_coding	Got1	intron	ENSMUSG00000025190	NonProperStrand	147	chr4	131865855	131865925	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.2901
chr5	132012924	132012945	protein_coding	Auts2	intron	ENSMUSG00000029673	ProperStrand	71	chr9	114422674	114422721	protein_coding	Trim71	exon	ENSMUSG00000079259	ProperStrand	162	2	-17.2451
chr15	75455589	75455689	protein_coding	Zfp41	utr3	ENSMUSG00000047003	ProperStrand	9	chr3	108363202	108363223	protein_coding	Tmem167b	exon	ENSMUSG00000068732	ProperStrand	3	1	-inf
chr17	34046483	34046499	protein_coding	Daxx	utr5	ENSMUSG00000002307	ProperStrand	26	chr16	23110828	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.4162
chr10	20043511	20043601	protein_coding	Bclaf1	exon	ENSMUSG00000037608	ProperStrand	83	chr5	74489563	74489643	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-3.1824
chr4	16253033	16253123	LINE	L1Md_A	L1	chr4L1Md_A16252109	ProperStrand	2	chr9	19462372	19462452	LINE	L1Md_A	L1	chr9L1Md_A19461964	ProperStrand	81	1	-inf
chr17	32453268	32453285	protein_coding	Akap8	exon	ENSMUSG00000024045	ProperStrand	339	chr1	93215676	93216733	protein_coding	Scly	exon	ENSMUSG00000026307	ProperStrand	3	1	-16.2818
chr2	168592543	168592643	protein_coding	Sall4	utr5	ENSMUSG00000027547	ProperStrand	82	chr1	162967115	162967178	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	1	-8.0548
chr12	26992861	26992877	protein_coding	Rnf144a	utr3	ENSMUSG00000020642	ProperStrand	15	chr2	26494802	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.7664
chr2	90235314	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	63089218	63089235	protein_coding	Map2k5	intron	ENSMUSG00000058444	NonProperStrand	79	1	-3.9419
chr1	134212897	134212914	protein_coding	Nuak2	exon	ENSMUSG00000009772	NonProperStrand	19	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.3857
chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	chr10	41644311	41644329	protein_coding	Armc2	exon	ENSMUSG00000071324	ProperStrand	281	1	-9.4728
chr17	75946997	75947082	protein_coding	Fam98a	exon	ENSMUSG00000002017	ProperStrand	22	chr12	17291079	17291111	protein_coding	Pdia6	utr3	ENSMUSG00000020571	ProperStrand	114	2	-inf
chr10	110369087	110372250	protein_coding	Csrp2	exon	ENSMUSG00000020186	ProperStrand	24	chr9	15119639	15119968	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	8	-inf
chr19	46836201	46836291	protein_coding	Cnnm2	utr5	ENSMUSG00000064105	ProperStrand	18	chr11	6428033	6428113	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-9.0563
chr3	144265395	144265475	LTR	ORR1B1	MaLR	chr3ORR1B1144265163	ProperStrand	1	chr3	144761921	144762011	protein_coding	Clca5	utr5	ENSMUSG00000036960	ProperStrand	86	1	-inf
chr17	46702396	46702442	protein_coding	Ptk7	exon	ENSMUSG00000023972	ProperStrand	101	chr14	31827478	31827545	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	3	-13.6262
chr1	58070459	58070559	protein_coding	Sgol2	exon	ENSMUSG00000026039	ProperStrand	36	chr9	120037945	120037978	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-5.7013
chrX	148705297	148705557	protein_coding	Kdm5c	exon	ENSMUSG00000025332	ProperStrand	139	chr11	116938659	116938749	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-4.5276
chr15	36530409	36530698	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr12	112779149	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	3	-1.8604
chr19	11021688	11021742	protein_coding-noncoding	Ccdc86	utr3	ENSMUSG00000024732	ProperStrand	1	chr17	45705263	45705336	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	1	-inf
chr16	13858969	13859034	protein_coding	Pdxdc1	exon	ENSMUSG00000022680	ProperStrand	26	chr18	35716763	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-12.2836
chr19	10682344	10682771	protein_coding	Ddb1	exon	ENSMUSG00000024740	ProperStrand	304	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	1	-3.8841
chr8	90767165	90769498	protein_coding	Papd5	exon	ENSMUSG00000036779	ProperStrand	32	chr9	64022863	64022923	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-9.2895
chr4	155196132	155196206	protein_coding	Ccnl2	exon	ENSMUSG00000029068	ProperStrand	19	chr10	23505152	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-10.9678
chrX	152009278	152009294	protein_coding	Ptchd1	exon	ENSMUSG00000041552	NonProperStrand	294	chr11	106362557	106362673	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	2	-7.1717
chr7	35022367	35022418	protein_coding	4931406P16Rik	utr3	ENSMUSG00000066571	ProperStrand	75	chr7	29136580	29136653	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.9970
chr10	122391590	122391608	LINE	L1M4	L1	chr10L1M4122391237	ProperStrand	3	chr6	128386721	128388466	protein_coding	Fkbp4	exon	ENSMUSG00000030357	ProperStrand	114	1	-19.0244
chr7	133929500	133929614	protein_coding	Ppp4c	utr3	ENSMUSG00000030697	ProperStrand	12	chr11	114594283	114594300	protein_coding	Dnaic2	exon	ENSMUSG00000034706	NonProperStrand	1	1	-inf
chr9	64024930	64024987	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	chr16	23111749	23111837	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	5	-0.7581
chr4	132857683	132857724	protein_coding	Wdtc1	exon	ENSMUSG00000037622	ProperStrand	81	chr4	56910496	56910569	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-5.5182
chr10	104351987	104352007	Other	RMER1A	Other	chr10RMER1A104351322	ProperStrand	15	chr7	52714933	52714982	protein_coding	Ftl1	exon	ENSMUSG00000050708	ProperStrand	807	1	-10.9291
chr2	90235310	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	168239525	168239541	protein_coding	Ildr2	exon	ENSMUSG00000040612	ProperStrand	103	1	-3.4506
chr5	38931337	38931385	protein_coding	Wdr1	exon	ENSMUSG00000005103	ProperStrand	16	chr17	24857740	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	3	-11.4529
chr10	26766750	26766771	protein_coding	Lama2	intron	ENSMUSG00000019899	NonProperStrand	36	chr14	76245204	76245236	protein_coding	Tpt1	utr5	ENSMUSG00000060126	ProperStrand	236	1	-11.5982
chr11	57928869	57930948	protein_coding	Cnot8	exon	ENSMUSG00000020515	NonProperStrand	2	chr19	8800377	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-10.8391
chr16	20677797	20689300	protein_coding	Eif4g1	exon	ENSMUSG00000045983	ProperStrand	199	chr17	24857719	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-1.3358
chr1	174047126	174047326	protein_coding	Copa	exon	ENSMUSG00000026553	ProperStrand	33	chr10	23505152	23505197	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.1417
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr4	148742459	148745276	protein_coding	Ube4b	exon	ENSMUSG00000028960	ProperStrand	66	1	-6.8382
chr11	115435748	115435838	protein_coding	Nup85	intron	ENSMUSG00000020739	ProperStrand	33	chr10	90581059	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-5.9768
chr10	85517996	85518012	protein_coding	Syn3	utr3	ENSMUSG00000059602	NonProperStrand	40	chr14	31827485	31827515	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-7.7542
chr5	113516655	113516761	protein_coding	2900026A02Rik	utr3	ENSMUSG00000051339	ProperStrand	3	chr11	97642952	97643008	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-8.5513
chr3	107514005	107514024	SINE	ID_B1	B4	chr3ID_B1107513841	NonProperStrand	1	chr7	116663715	116663762	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-inf
chr4	85016349	85016365	protein_coding	Sh3gl2	intron	ENSMUSG00000028488	NonProperStrand	313	chr5	121655099	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-2.0623
chr10	12902322	12902670	protein_coding	Ltv1	exon	ENSMUSG00000019814	ProperStrand	76	chr4	131865855	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.4149
chr2	14055894	14055984	protein_coding-noncoding	Stam	utr5	ENSMUSG00000026718	ProperStrand	2	chr7	52381972	52382005	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	2	-inf
chr1	87983863	87983943	protein_coding	Psmd1	intron	ENSMUSG00000026229	ProperStrand	664	chr14	52829472	52829562	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-3.5365
chr4	43505722	43505812	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr7	135124967	135125047	protein_coding	Fus	exon	ENSMUSG00000030795	ProperStrand	162	1	-1.4412
chr14	15572351	15572368	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr2	37502726	37502742	protein_coding	Strbp	utr5	ENSMUSG00000026915	ProperStrand	90	1	-10.4686
chr15	58248121	58248138	protein_coding	D15Ertd621e	intron	ENSMUSG00000037119	ProperStrand	26	chr9	57290892	57290976	protein_coding	Scamp5	utr3	ENSMUSG00000040722	ProperStrand	12	1	-18.1869
chr14	51427119	51427202	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr17	42966973	42967045	protein_coding	Cd2ap	exon	ENSMUSG00000061665	ProperStrand	44	1	-7.8288
chr8	32239595	32239611	protein_coding	Rnf122	utr3	ENSMUSG00000039328	NonProperStrand	42	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.9630
chr6	129818845	129822222	protein_coding	Klra17	exon	ENSMUSG00000014543	NonProperStrand	1	chr4	137860907	137861072	protein_coding	Ddost	exon	ENSMUSG00000028757	ProperStrand	49	1	-inf
chr7	109060286	109060366	protein_coding	2400001E08Rik	utr3	ENSMUSG00000030842	ProperStrand	18	chr15	101926393	101926483	protein_coding	Eif4b	utr3	ENSMUSG00000058655	ProperStrand	484	1	-11.5748
chr9	78008292	78008495	protein_coding	Ick	exon	ENSMUSG00000009828	ProperStrand	6	chr11	98878342	98878370	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-11.0174
chr11	99885311	99885327	protein_coding	Krt33b	exon	ENSMUSG00000057723	NonProperStrand	352	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-2.0017
chr19	5667238	5667382	protein_coding	Pcnxl3	exon	ENSMUSG00000054874	ProperStrand	96	chr2	75503543	75503642	protein_coding	Hnrnpa3	utr3	ENSMUSG00000059005	ProperStrand	289	1	-9.2196
chr4	43505792	43505872	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr7	148547001	148547350	protein_coding	Eps8l2	exon	ENSMUSG00000025504	ProperStrand	14	1	-5.8657
chr6	31714159	31714239	LINE	L1Md_F2	L1	chr6L1Md_F231712683	NonProperStrand	1	chr7	54442977	54443067	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	1	-inf
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr11	97642952	97643080	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	6	-1.9240
chr3	89904556	89904610	protein_coding	Tpm3	utr3	ENSMUSG00000027940	ProperStrand	55	chr8	32260335	32260365	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	2	-7.9422
chr5	122830048	122831212	protein_coding	Gpn3	exon	ENSMUSG00000029464	ProperStrand	19	chr2	26493383	26493473	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-5.9729
chr18	75591124	75591141	protein_coding	Ctif	utr3	ENSMUSG00000052928	ProperStrand	41	chr11	6519815	6519876	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-8.7063
chr1	145971868	145971889	LINE	L2	L2	chr1L2145971861	NonProperStrand	49	chr8	32260360	32260423	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-5.0210
chr11	6319266	6319515	protein_coding	Ppia	exon	ENSMUSG00000071866	ProperStrand	127	chr16	23110455	23110553	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.2922
chr13	23622205	23622273	lincRNA	Gm11335	intron	ENSMUSG00000085016	ProperStrand	20	chr9	120038550	120038640	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.1184
chr8	74022294	74030741	protein_coding	Plvap	utr3	ENSMUSG00000034845	ProperStrand	27	chr5	116039327	116040297	protein_coding	Gcn1l1	exon	ENSMUSG00000041638	ProperStrand	408	1	-11.0875
chr2	181384240	181384257	protein_coding	Prpf6	exon	ENSMUSG00000002455	ProperStrand	54	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-9.1382
chr12	110987483	110987508	lincRNA	Mirg	exon	ENSMUSG00000091158	ProperStrand	15	chr16	23110940	23110957	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.0842
chr18	25327160	25327178	protein_coding	5730494M16Rik	utr5	ENSMUSG00000024269	NonProperStrand	1	chr2	101537064	101537088	protein_coding	Traf6	exon	ENSMUSG00000027164	ProperStrand	24	1	-inf
chrX	93136011	93136027	protein_coding	Las1l	exon	ENSMUSG00000057421	ProperStrand	248	chr4	131865448	131865479	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-1.5624
chr14	80262508	80262525	lincRNA	Gm6999	intron	ENSMUSG00000075495	ProperStrand	265	chr7	116663659	116663754	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-1.8481
chr1	34068622	34068693	protein_coding	Dst	utr5	ENSMUSG00000026131	ProperStrand	461	chr5	65951440	65951524	protein_coding	Ube2k	intron	ENSMUSG00000029203	ProperStrand	289	1	-6.1090
chr13	42251355	42251402	protein_coding	Hivep1	exon	ENSMUSG00000021366	ProperStrand	24	chr4	131908719	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.6746
chr6	134819650	134819736	protein_coding	Gpr19	exon	ENSMUSG00000032641	ProperStrand	27	chr11	97642952	97643028	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.9172
chr7	13516157	13516196	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr5	115940300	115940385	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	1	-4.1863
chr5	89206421	89206438	protein_coding	Dck	intron	ENSMUSG00000029366	ProperStrand	12	chr7	116663711	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-5.5543
chr12	4857225	4857246	protein_coding	BC068281	exon	ENSMUSG00000051721	ProperStrand	3	chr16	23111372	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-inf
chr11	116533843	116533913	protein_coding-noncoding	1810032O08Rik	utr5	ENSMUSG00000020812	ProperStrand	3	chr3	8944538	8944638	protein_coding	Tpd52	intron	ENSMUSG00000027506	ProperStrand	37	1	-20.6471
chr2	135360025	135360043	antisense	9630028H03Rik	.	ENSMUSG00000085631	NonProperStrand	22	chr3	88715213	88715230	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-9.2541
chr10	76531183	76532575	protein_coding	Col18a1	exon	ENSMUSG00000001435	ProperStrand	287	chr10	80641705	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	2	-7.4505
chr17	73462115	73462133	protein_coding	Lclat1	intron	ENSMUSG00000054469	NonProperStrand	6	chr7	51505506	51505591	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	1	-13.5381
chr7	27944575	27944591	protein_coding	Egln2	exon	ENSMUSG00000058709	NonProperStrand	1	chr3	68889122	68889145	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-inf
chr14	98163197	98163216	LINE	Lx	L1	chr14Lx98162966	ProperStrand	1	chr15	79913288	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-inf
chrX	97710956	97711003	protein_coding	Igbp1	exon	ENSMUSG00000031221	ProperStrand	33	chr16	23110965	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-3.0989
chr7	109891478	109891495	protein_coding	Olfr78	exon	ENSMUSG00000043366	NonProperStrand	1	chr18	35716700	35716763	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-inf
chr17	33960231	33961289	protein_coding	Rps28	exon	ENSMUSG00000067288	ProperStrand	52	chr4	131908810	131908890	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.4243
chr2	4829164	4829180	protein_coding	Sephs1	utr3	ENSMUSG00000026662	NonProperStrand	271	chr1	120924083	120924136	protein_coding	Gli2	intron	ENSMUSG00000048402	ProperStrand	148	1	-8.4833
chr8	44270757	44272959	protein_coding	Triml2	exon	ENSMUSG00000091490	ProperStrand	32	chr7	117189947	117190027	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.5139
chr4	139483126	139488171	lincRNA	4933427I22Rik	exon	ENSMUSG00000085928	ProperStrand	62	chr12	110881049	110881070	lincRNA	Rian	intron	ENSMUSG00000091793	ProperStrand	612	1	-8.6007
chr2	32818743	32818833	protein_coding-noncoding	Rpl12	utr5	ENSMUSG00000038900	ProperStrand	68	chr19	40642843	40644996	protein_coding	Aldh18a1	exon	ENSMUSG00000025007	ProperStrand	19	1	-15.3956
chr17	15128183	15128216	protein_coding	Phf10	intron	ENSMUSG00000023883	NonProperStrand	1	chr5	108336363	108336459	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-inf
chr2	32817238	32817273	protein_coding	Rpl12	utr5	ENSMUSG00000038900	ProperStrand	167	chr2	30192183	30192236	protein_coding	Nup188	exon	ENSMUSG00000052533	ProperStrand	96	1	-10.3152
chr3	35725890	35725907	protein_coding	Atp11b	exon	ENSMUSG00000037400	NonProperStrand	18	chr2	146049203	146049219	protein_coding	Insm1	exon	ENSMUSG00000068154	ProperStrand	8	1	-18.7139
chr6	120467088	120468467	protein_coding	Cecr5	exon	ENSMUSG00000058979	ProperStrand	97	chr11	97642968	97643007	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.6930
chr12	17552961	17553046	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr11	74718963	74719010	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	5	-7.5041
chr15	82980085	82980191	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr17	24665460	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	8	-6.1152
chr4	140260174	140277649	protein_coding	Rcc2	utr3	ENSMUSG00000040945	ProperStrand	228	chrX	34622906	34623037	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	3	-3.3227
chr12	17552950	17553040	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr9	64022854	64022878	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	5	-5.0146
chr10	75359792	75360190	protein_coding	Smarcb1	utr3	ENSMUSG00000000902	ProperStrand	109	chr13	34219326	34219426	protein_coding	Tubb2b	utr3	ENSMUSG00000045136	ProperStrand	49	1	-12.5237
chr1	127290535	127290561	protein_coding	Actr3	utr3	ENSMUSG00000026341	ProperStrand	45	chr13	103895241	103895257	protein_coding	Mast4	intron	ENSMUSG00000034751	ProperStrand	150	2	-18.5358
chr11	116535951	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr11	117221807	117221834	protein_coding	Sept9	exon	ENSMUSG00000059248	ProperStrand	60	1	-5.9107
chr7	87369700	87369751	protein_coding	Sema4b	exon	ENSMUSG00000030539	ProperStrand	54	chr2	173415445	173417631	pseudogene	Ppp4r1l-ps	.	ENSMUSG00000055897	ProperStrand	9	1	-17.3266
chr19	46153194	46153392	protein_coding	Nolc1	exon	ENSMUSG00000015176	ProperStrand	53	chr17	13112558	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-4.8185
chr6	47881615	47881705	protein_coding	Zfp212	utr3	ENSMUSG00000052763	ProperStrand	20	chr4	131866155	131866235	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	7	-19.7958
chr11	120429604	120432902	protein_coding	P4hb	exon	ENSMUSG00000025130	ProperStrand	83	chr3	123210881	123210971	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.5608
chr19	44472205	44472222	protein_coding	Scd1	utr3	ENSMUSG00000037071	NonProperStrand	3	chr18	35716687	35716739	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-8.1910
chr8	108687298	108687399	protein_coding	Pla2g15	utr3	ENSMUSG00000031903	ProperStrand	40	chr4	131908236	131908295	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	17	-inf
chr10	62228330	62228388	snoRNA	ENSMUSG00000080469_Snord98	.	ENSMUSG00000080469	ProperStrand	124	chr5	130300460	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.3648
chr11	116475610	116475711	protein_coding	Rhbdf2	intron	ENSMUSG00000020806	ProperStrand	20	chr15	34370545	34370614	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-5.6655
chr15	31401489	31401546	protein_coding	March6	exon	ENSMUSG00000039100	ProperStrand	94	chr9	15118245	15118322	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-2.6636
chr5	31362299	31362492	protein_coding	Cad	exon	ENSMUSG00000013629	ProperStrand	260	chr9	15119298	15119388	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-2.4122
chr11	116533824	116533892	snoRNA	ENSMUSG00000065640_Snord1c	.	ENSMUSG00000065640	ProperStrand	373	chr2	26494708	26494826	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	4	-2.8087
chr12	110888878	110888907	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr8	113362433	113362470	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	1	-4.6902
chr1	93001778	93001868	protein_coding	Lrrfip1	exon	ENSMUSG00000026305	ProperStrand	26	chr16	23110898	23110978	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.2392
chr10	29174133	29219751	protein_coding	Rspo3	exon	ENSMUSG00000019880	ProperStrand	15	chr3	108357431	108357495	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-7.2879
chr7	52958453	52958469	protein_coding	Car11	exon	ENSMUSG00000003273	NonProperStrand	250	chr4	131865854	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-0.9798
chr3	53459183	53459200	protein_coding	Frem2	exon	ENSMUSG00000037016	NonProperStrand	11	chr9	120039544	120039590	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-10.8347
chr3	90290155	90290177	protein_coding	Ilf2	exon	ENSMUSG00000001016	ProperStrand	28	chr7	52381973	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-8.2378
chr17	13112294	13112760	protein_coding	Tcp1	exon	ENSMUSG00000068039	ProperStrand	116	chr1	162965989	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-2.4308
chr4	131908719	131908750	lincRNA	Gm17300	exon	ENSMUSG00000091021	ProperStrand	109	chr3	123210854	123210946	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	NonProperStrand	45	1	-12.6943
chr3	89883767	89890390	protein_coding	Tpm3	exon	ENSMUSG00000027940	ProperStrand	55	chr7	67123693	67123735	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	1	-9.7136
chr18	38003731	38003798	protein_coding	Diap1	utr3	ENSMUSG00000024456	ProperStrand	77	chrX	34622910	34623023	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-4.7622
chr1	93266761	93266851	protein_coding	Fam132b	exon	ENSMUSG00000047443	ProperStrand	3	chr3	68889060	68889140	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-9.4435
chr14	51427116	51427184	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr7	52381722	52381756	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	3	-5.1901
chr15	83058291	83058354	protein_coding	A4galt	exon	ENSMUSG00000047878	ProperStrand	21	chr2	26493364	26493404	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-9.4654
chr15	97897281	97906245	protein_coding	Senp1	exon	ENSMUSG00000033075	ProperStrand	24	chr9	120038000	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-6.5078
chr10	80291624	80291663	protein_coding	Oaz1	exon	ENSMUSG00000035242	ProperStrand	49	chr15	82980193	82980224	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-7.5432
chr5	136384339	136384365	protein_coding	Ywhag	utr3	ENSMUSG00000051391	ProperStrand	142	chr4	131908689	131908785	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-3.1145
chr7	3296838	3296944	protein_coding	Myadm	exon	ENSMUSG00000068566	ProperStrand	31	chr2	91436311	91436335	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-8.8231
chr15	99539752	99539775	protein_coding	Smarcd1	exon	ENSMUSG00000023018	ProperStrand	43	chr19	8963090	8963168	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.8490
chr15	77356785	77356801	protein_coding	Apol7c	exon	ENSMUSG00000044309	ProperStrand	197	chr17	35088957	35089021	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-3.5950
chr13	9170568	9170686	protein_coding	Larp4b	utr3	ENSMUSG00000033499	ProperStrand	53	chr19	8798484	8798516	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-5.4535
chr10	82322035	82323348	protein_coding	Txnrd1	utr5	ENSMUSG00000020250	ProperStrand	47	chr7	16677707	16678200	protein_coding	Zfp541	exon	ENSMUSG00000078796	ProperStrand	33	1	-15.0126
chr8	77620854	77620894	protein_coding	Hmox1	exon	ENSMUSG00000005413	ProperStrand	12	chrX	34622906	34622957	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-6.2898
chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	chr7	52378402	52378438	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	1	-1.0787
chr10	60692417	60692433	protein_coding	Adamts14	exon	ENSMUSG00000059901	NonProperStrand	127	chr16	23109049	23109066	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-5.8012
chr5	37769631	37771664	protein_coding	Evc2	exon	ENSMUSG00000050248	ProperStrand	8	chr11	69483136	69483197	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-6.3191
chr13	9833560	9833659	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr1	162967792	162967810	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	1	-2.1737
chr10	126177415	126177495	LINE	L1_Mur3	L1	chr10L1_Mur3126177150	ProperStrand	1	chr10	126176672	126176762	Other	RMER1B	Other	chr10RMER1B126176486	NonProperStrand	1	1	-inf
chr19	58929372	58929389	protein_coding	Hspa12a	intron	ENSMUSG00000025092	NonProperStrand	17	chr4	116828379	116828428	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-10.9381
chr7	29199107	29199150	protein_coding	Samd4b	exon	ENSMUSG00000037513	ProperStrand	72	chr5	108336377	108336487	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-7.5305
chr9	44567031	44567063	protein_coding	Arcn1	exon	ENSMUSG00000032096	ProperStrand	35	chr16	23110527	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.4208
chr4	115449617	115449634	protein_coding	4732418C07Rik	utr3	ENSMUSG00000034210	ProperStrand	16	chr8	44386046	44389889	protein_coding	Zfp42	utr5	ENSMUSG00000051176	ProperStrand	127	3	-inf
chr1	65941454	65941473	SINE	B1_Mur1	Alu	chr1B1_Mur165941379	ProperStrand	1	chr11	102294588	102294607	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	1	-inf
chr9	61917999	61918089	protein_coding	Glce	exon	ENSMUSG00000032252	ProperStrand	15	chr4	131908265	131908345	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-6.4894
chr13	73740696	73740739	LINE	Lx5	L1	chr13Lx573740257	NonProperStrand	2	chr16	23111442	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-inf
mmu-miR-6238	1	20	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr16	23110491	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	6	-5.5965
mmu-miR-3068-3p	3	22	miRNA	mmu-miR-3068-3p	.	mmu-miR-3068-3p	ProperStrand	2	chr4	131865865	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-8.7800
chr2	26493424	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr12	52546937	52546954	protein_coding	Scfd1	intron	ENSMUSG00000020952	ProperStrand	10	1	-9.8302
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr11	105190588	105190604	protein_coding	Mrc2	exon	ENSMUSG00000020695	NonProperStrand	4	1	-13.4632
chr13	6599855	6602001	protein_coding	Pfkp	exon	ENSMUSG00000021196	ProperStrand	197	chr10	80641721	80641776	protein_coding	Eef2	intron	ENSMUSG00000034994	ProperStrand	2244	1	-3.8134
chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	chr18	70660651	70660668	protein_coding	Stard6	utr3	ENSMUSG00000079608	ProperStrand	4	1	-14.2634
chr17	17967318	17967336	miRNA	AC165361.1	.	ENSMUSG00000092799	NonProperStrand	2	chr7	118219574	118219656	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-inf
chr2	29778030	29778130	protein_coding	Odf2	utr3	ENSMUSG00000026790	ProperStrand	58	chr10	126497183	126497199	protein_coding	March9	utr5	ENSMUSG00000040502	ProperStrand	25	2	-inf
chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	chr7	29136523	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-2.2014
chr5	110860922	110860967	protein_coding	Fbrsl1	intron	ENSMUSG00000043323	ProperStrand	131	chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	1	-7.9278
chr19	60842422	60842496	protein_coding	Eif3a	exon	ENSMUSG00000024991	ProperStrand	287	chr13	51743638	51743704	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	9	-20.4493
chr10	90559028	90559084	protein_coding	Ikbip	exon	ENSMUSG00000019975	ProperStrand	12	chr4	131865934	131865988	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-11.4353
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr11	106362638	106362693	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-1.1304
chr12	87846851	87847374	protein_coding	Esrrb	exon	ENSMUSG00000021255	ProperStrand	254	chr18	35714256	35714290	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-1.1078
chr9	78023110	78023159	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr11	116089055	116089245	protein_coding	Evpl	exon	ENSMUSG00000034282	ProperStrand	33	1	-7.0643
chr17	35284104	35284166	protein_coding	Bag6	exon	ENSMUSG00000024392	ProperStrand	181	chr10	95499367	95499383	protein_coding	Eea1	utr3	ENSMUSG00000036499	ProperStrand	82	1	-10.4704
chr1	16093393	16093613	protein_coding	Rpl7	exon	ENSMUSG00000043716	ProperStrand	93	chr1	72272876	72272966	snRNA	ENSMUSG00000075752_U2	.	ENSMUSG00000075752	ProperStrand	535	1	-8.0576
chr2	29850968	29851011	protein_coding	Spna2	exon	ENSMUSG00000057738	ProperStrand	222	chr18	35716822	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-1.7820
chr7	107983956	107984538	protein_coding	Fam168a	utr3	ENSMUSG00000029461	ProperStrand	14	chr9	15119668	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.3767
chr2	164311966	164311983	protein_coding	Dbndd2	utr5	ENSMUSG00000017734	ProperStrand	53	chr18	75160711	75160751	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	2	-14.9285
chr3	105490124	105490190	protein_coding	Ddx20	exon	ENSMUSG00000027905	ProperStrand	18	chr15	77356785	77356801	protein_coding	Apol7c	exon	ENSMUSG00000044309	ProperStrand	197	1	-13.3726
chr9	59513122	59513160	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr5	54389949	54389965	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	1	-4.7088
chr15	8308715	8308736	protein_coding	Nipbl	exon	ENSMUSG00000022141	ProperStrand	45	chr16	23110910	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-2.1851
chr12	8681099	8681115	protein_coding	Pum2	utr5	ENSMUSG00000020594	ProperStrand	39	chr13	96102552	96102611	protein_coding	Zbed3	intron	ENSMUSG00000041995	ProperStrand	33	2	-18.7646
chr1	120580620	120580700	protein_coding	Tfcp2l1	utr3	ENSMUSG00000026380	ProperStrand	158	chr15	71624757	71624797	snoRNA	ENSMUSG00000088895_SNORA81	.	ENSMUSG00000088895	ProperStrand	348	1	-7.8561
chr9	78326776	78326876	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr7	52382752	52382826	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-0.7150
chrX	159425911	159426001	protein_coding	Ctps2	intron	ENSMUSG00000031360	ProperStrand	11	chr15	98350203	98350283	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	3	-18.4550
chr9	113589237	113594458	protein_coding	Pdcd6ip	exon	ENSMUSG00000032504	ProperStrand	53	chr16	8637173	8637253	protein_coding	Tmem186	intron	ENSMUSG00000043140	ProperStrand	3	2	-inf
chr5	151343520	151343597	protein_coding	Brca2	exon	ENSMUSG00000041147	ProperStrand	75	chr17	35087894	35087929	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-4.7686
chr3	113827103	113827119	protein_coding	Col11a1	utr3	ENSMUSG00000027966	NonProperStrand	139	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-4.2454
chr10	107800736	107800843	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	chr1	89681185	89681349	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	2	-1.8933
chr12	84893394	84893469	protein_coding	Zfyve1	exon	ENSMUSG00000042628	ProperStrand	28	chr2	26768378	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-7.1139
chr19	5885551	5885633	protein_coding	Slc25a45	utr3	ENSMUSG00000024818	ProperStrand	1	chr4	131908357	131908421	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-inf
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr4	49543841	49543857	protein_coding	Zfp189	utr3	ENSMUSG00000039634	ProperStrand	18	1	-11.0321
chr1	91358409	91358430	protein_coding	Agap1	intron	ENSMUSG00000055013	ProperStrand	229	chr2	32818804	32818939	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	2	-5.1035
chr14	65325317	65325360	protein_coding	Kif13b	intron	ENSMUSG00000060012	ProperStrand	37	chr17	13112513	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	3	-12.8903
chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	chr18	75161533	75161596	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-4.4413
chr11	89521929	89521946	LINE	L1MC1	L1	chr11L1MC189521770	ProperStrand	1	chr11	52057243	52058491	protein_coding	Skp1a	exon	ENSMUSG00000036309	ProperStrand	8	1	-inf
chr11	45723144	45723160	protein_coding	Clint1	utr3	ENSMUSG00000006169	NonProperStrand	273	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-2.9821
chr14	76247711	76247843	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	chr2	144087322	144087462	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	5	-0.7159
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr14	52816779	52816795	protein_coding	Supt16h	exon	ENSMUSG00000035726	ProperStrand	193	1	-8.0680
chr16	91815668	91815729	protein_coding	Itsn1	exon	ENSMUSG00000022957	ProperStrand	172	chr9	64333077	64333098	protein_coding	Megf11	intron	ENSMUSG00000036466	NonProperStrand	64	1	-11.0703
chr10	5991986	5992055	protein_coding	Akap12	exon	ENSMUSG00000038587	ProperStrand	1008	chr7	52382752	52382804	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	2	-2.9549
chr12	29319074	29319105	protein_coding	Rps7	exon	ENSMUSG00000061477	ProperStrand	129	chr11	48616658	48616708	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	2	-12.4843
chr8	77633994	77634030	protein_coding	Mcm5	exon	ENSMUSG00000005410	ProperStrand	199	chr9	61761320	61762186	protein_coding	Rplp1	exon	ENSMUSG00000007892	ProperStrand	116	1	-9.5856
chr6	28376405	28376431	protein_coding	Arf5	utr3	ENSMUSG00000020440	ProperStrand	19	chr1	162965999	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-5.8254
chr2	33070148	33070168	protein_coding	Ralgps1	intron	ENSMUSG00000038831	ProperStrand	75	chr7	150717332	150717422	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-5.0725
chr14	96509427	96509492	protein_coding	Klhl1	intron	ENSMUSG00000022076	NonProperStrand	5	chr4	131908356	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-6.0411
chr7	38439772	38439791	protein_coding	Zfp536	intron	ENSMUSG00000043456	NonProperStrand	236	chr7	117189881	117189981	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-1.1244
chr14	35124485	35124512	protein_coding	Glud1	exon	ENSMUSG00000021794	ProperStrand	72	chr9	56775853	56775870	protein_coding	Snx33	utr5	ENSMUSG00000032733	NonProperStrand	116	1	-11.6227
chr9	30957843	30959510	protein_coding	Aplp2	exon	ENSMUSG00000031996	ProperStrand	172	chr11	69481335	69481432	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	4	-6.0322
chr11	69481341	69481421	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	NonProperStrand	24	chr10	23505170	23505260	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	NonProperStrand	45	1	-15.7507
chr4	151757043	151757061	protein_coding	Chd5	exon	ENSMUSG00000005045	ProperStrand	51	chr3	87743470	87743526	protein_coding	Isg20l2	utr3	ENSMUSG00000048039	ProperStrand	10	1	-17.3736
chr5	74489193	74489274	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr1	39426933	39427837	protein_coding	Rpl31	exon	ENSMUSG00000073702	ProperStrand	41	1	-6.3728
chr17	45705193	45705264	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr1	87975320	87978652	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	1	-2.2342
chr1	88984025	88984041	protein_coding	Alppl2	exon	ENSMUSG00000026246	ProperStrand	2	chr15	71624749	71624796	snoRNA	ENSMUSG00000088895_SNORA81	.	ENSMUSG00000088895	ProperStrand	348	1	-17.1994
chr10	6450631	6450649	protein_coding	Plekhg1	intron	ENSMUSG00000040624	NonProperStrand	75	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-4.7686
chr12	116129586	116129676	LINE	L1Md_F2	L1	chr12L1Md_F2116127663	NonProperStrand	1	chrX	151195704	151195784	LINE	L1Md_F2	L1	chrXL1Md_F2151193837	NonProperStrand	1	1	-inf
chr14	73768183	73784818	protein_coding	Itm2b	exon	ENSMUSG00000022108	ProperStrand	25	chr6	124665415	124665515	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	1	-8.6914
chr2	84515608	84515912	protein_coding	Tmx2	exon	ENSMUSG00000050043	ProperStrand	31	chr16	23110829	23110908	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-3.2978
chr5	128260068	128260148	SINE	B3	B2	chr5B3128260007	ProperStrand	1	chr5	128259844	128259934	Simple_repeat	(TG)n	Simple_repeat	chr5(TG)n128259859	NonProperStrand	1	1	-inf
chr9	113827687	113827802	protein_coding	Clasp2	utr3	ENSMUSG00000033392	ProperStrand	30	chr7	29136633	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.6017
chr14	85331898	85331915	LTR	RMER19C	ERVK	chr14RMER19C85331559	NonProperStrand	1	chr17	35299535	35299642	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	NonProperStrand	14	1	-inf
chr8	108603088	108603183	protein_coding	Nfatc3	exon	ENSMUSG00000031902	ProperStrand	75	chr9	63868722	63868739	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	7	-20.6339
chr11	4918065	4918093	protein_coding	Ap1b1	exon	ENSMUSG00000009090	ProperStrand	43	chr2	124944118	124944155	protein_coding	Myef2	intron	ENSMUSG00000027201	ProperStrand	19	1	-16.3371
mmu-miR-6240	7	26	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chrX	130984218	130984235	protein_coding	Drp2	exon	ENSMUSG00000000223	ProperStrand	9	1	-9.7556
chr15	81354775	81354791	SINE	B3A	B2	chr15B3A81354761	ProperStrand	16	chr11	106362304	106362331	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-8.4953
chr8	3507186	3507270	protein_coding	Mcoln1	exon	ENSMUSG00000004567	ProperStrand	15	chr11	68887042	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	2	-11.1594
chr2	58311367	58311446	protein_coding	Acvr1	exon	ENSMUSG00000026836	ProperStrand	5	chrX	49471330	49471347	protein_coding	Gpc4	intron	ENSMUSG00000031119	ProperStrand	8	1	-18.7911
chr2	179992945	179992974	protein_coding	Rps21	exon	ENSMUSG00000039001	ProperStrand	46	chr18	35716761	35716828	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.6197
chr15	100630911	100630927	protein_coding	Slc4a8	exon	ENSMUSG00000023032	ProperStrand	15	chr5	21309448	21309517	protein_coding	Psmc2	exon	ENSMUSG00000028932	ProperStrand	27	6	-20.9863
chr11	4630227	4632072	protein_coding	Zmat5	exon	ENSMUSG00000009076	ProperStrand	9	chr16	23110829	23110875	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.9939
chr8	98388092	98388173	protein_coding	Got2	utr3	ENSMUSG00000031672	ProperStrand	85	chr12	88778632	88778722	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-5.8117
chr5	115235981	115236026	protein_coding	Ankrd13a	exon	ENSMUSG00000041870	ProperStrand	22	chr14	76247724	76247814	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	3	-14.2045
chr11	100937797	100937896	protein_coding	Naglu	exon	ENSMUSG00000001751	ProperStrand	3	chr9	15118326	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-9.6743
chr13	9833551	9833617	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr4	34597499	34599419	protein_coding	Rars2	exon	ENSMUSG00000028292	ProperStrand	9	1	-8.7793
chr3	152450610	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	chr5	37187663	37187788	protein_coding	Mrfap1	exon	ENSMUSG00000055302	ProperStrand	62	1	-8.7387
chr5	113370707	113370723	protein_coding	Adrbk2	exon	ENSMUSG00000042249	ProperStrand	56	chr16	64926224	64926240	protein_coding	Htr1f	exon	ENSMUSG00000050783	NonProperStrand	10	1	-17.1015
chr3	99944223	99946376	protein_coding	Wdr3	exon	ENSMUSG00000033285	ProperStrand	30	chr1	88247743	88247802	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-6.4619
chr2	91516544	91518897	protein_coding	Atg13	exon	ENSMUSG00000027244	ProperStrand	22	chr4	131908256	131908336	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.0772
chr11	69481340	69481430	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	chr1	161270415	161270495	snoRNA	ENSMUSG00000089536_Scarna3a	.	ENSMUSG00000089536	ProperStrand	247	1	-0.9739
chr14	76906370	76906471	protein_coding	Tsc22d1	exon	ENSMUSG00000022010	ProperStrand	86	chr4	131908688	131908719	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-3.9199
chr6	101485357	101485378	LTR	MTEa	MaLR	chr6MTEa101485361	ProperStrand	45	chr9	40612830	40612878	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	1	-10.1228
chr11	87192390	87192408	protein_coding	Rad51c	utr3	ENSMUSG00000007646	NonProperStrand	2	chr4	131865921	131865977	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-8.7800
chr11	120440461	120440551	protein_coding	Arhgdia	utr3	ENSMUSG00000025132	ProperStrand	39	chr5	108336378	108336458	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-5.7217
chr7	17040701	17040717	protein_coding	Tmem160	exon	ENSMUSG00000019158	ProperStrand	55	chr1	136729073	136729092	protein_coding	Ppp1r12b	intron	ENSMUSG00000073557	NonProperStrand	12	1	-16.7676
chr10	93342353	93342883	protein_coding	Metap2	exon	ENSMUSG00000036112	ProperStrand	78	chr2	158185530	158185565	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	2	-9.7066
chr8	125005642	125005732	protein_coding	Fam38a	utr3	ENSMUSG00000014444	ProperStrand	132	chr14	31951990	31952070	protein_coding	Nt5dc2	exon	ENSMUSG00000071547	ProperStrand	22	1	-13.7622
chr9	44143917	44144007	protein_coding	H2afx	utr3	ENSMUSG00000049932	ProperStrand	137	chr12	60141322	60141402	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-5.2090
chr14	8783826	8783861	protein_coding	Flnb	utr3	ENSMUSG00000025278	ProperStrand	124	chr6	146261384	146261401	protein_coding	Itpr2	exon	ENSMUSG00000030287	NonProperStrand	42	1	-12.5755
chr17	56754073	56761564	protein_coding	Lonp1	exon	ENSMUSG00000041168	ProperStrand	83	chr4	131866180	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-5.2963
chr18	70235630	70235649	protein_coding	Rab27b	intron	ENSMUSG00000024511	NonProperStrand	2	chr10	23505152	23505219	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-8.0476
chr9	111214369	111214387	protein_coding	Trank1	exon	ENSMUSG00000062296	ProperStrand	7	chr1	162965531	162965554	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-7.5326
chr11	115788792	115788846	protein_coding-noncoding	Recql5	utr3	ENSMUSG00000020752	ProperStrand	1	chr18	67364407	67364425	protein_coding	Gnal	intron	ENSMUSG00000024524	ProperStrand	6	1	-inf
chr9	78327513	78327543	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr8	10592076	10592093	protein_coding	Myo16	intron	ENSMUSG00000039057	NonProperStrand	45	1	-6.9051
chr9	16071451	16071470	protein_coding	Fat3	intron	ENSMUSG00000074505	NonProperStrand	9	chr16	23110828	23110882	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.9939
chr7	108080368	108080418	protein_coding	Arhgef17	utr5	ENSMUSG00000032875	ProperStrand	33	chr4	44162085	44162103	protein_coding	Rnf38	exon	ENSMUSG00000035696	ProperStrand	66	1	-14.3237
chr14	55035512	55035573	SINE	ID_B1	B4	chr14ID_B155035409	NonProperStrand	1	chr4	85016349	85016365	protein_coding	Sh3gl2	intron	ENSMUSG00000028488	NonProperStrand	313	1	-inf
chr11	21139313	21139349	protein_coding	Vps54	utr5	ENSMUSG00000020128	ProperStrand	15	chr9	15119646	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.2385
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr7	54106363	54106409	protein_coding	Ldha	exon	ENSMUSG00000063229	ProperStrand	280	1	-5.8727
chr12	77923183	77923202	protein_coding	Fntb	intron	ENSMUSG00000033373	ProperStrand	176	chr5	140281383	140281428	protein_coding	Tmem184a	utr3	ENSMUSG00000036687	ProperStrand	7	1	-15.5972
chr5	150025157	150025173	protein_coding	Uspl1	exon	ENSMUSG00000041264	NonProperStrand	33	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-7.0541
chr18	85020904	85020994	protein_coding	Cyb5	exon	ENSMUSG00000024646	ProperStrand	12	chr1	89681234	89681314	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-8.6786
chr19	6068969	6069059	protein_coding-noncoding	1110014N23Rik	utr3	ENSMUSG00000024797	ProperStrand	1	chr19	6068608	6068698	protein_coding	1110014N23Rik	intron	ENSMUSG00000024797	ProperStrand	49	1	-inf
chr18	73693117	73693186	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr5	111121064	111121200	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	14	-14.5762
chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	chr5	108334195	108334245	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-1.9217
chr16	91124131	91124211	LTR	ORR1A3	MaLR	chr16ORR1A391124001	NonProperStrand	1	chr3	108676213	108676303	protein_coding	Fndc7	intron	ENSMUSG00000045326	ProperStrand	2	1	-inf
chr5	122377814	122377831	protein_coding	Cux2	intron	ENSMUSG00000042589	NonProperStrand	9	chr1	162966812	162966857	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-10.1181
chr16	91729701	91729723	protein_coding	Itsn1	utr5	ENSMUSG00000022957	ProperStrand	172	chr9	39882020	39882036	protein_coding	Olfr982	exon	ENSMUSG00000049010	NonProperStrand	35	1	-12.2895
chr5	108333790	108333838	protein_coding	Rpl5	exon	ENSMUSG00000058558	ProperStrand	235	chr10	30530946	30531020	tRNA	tRNA81-GluCTC	.	522686	ProperStrand	154	2	-13.7957
chr14	33153227	33153832	protein_coding	Ogdhl	exon	ENSMUSG00000021913	ProperStrand	182	chr7	29136525	29136591	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-0.7700
chr5	115939521	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr5	108336364	108336495	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-1.1481
chr1	191930073	191930092	SINE	MIRb	MIR	chr1MIRb191930040	ProperStrand	1	chr1	162967115	162967139	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	1	-inf
chr4	131908393	131908461	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr9	71704221	71704237	protein_coding	Tcf12	exon	ENSMUSG00000032228	ProperStrand	26	1	-8.9399
chr5	21308929	21308971	protein_coding	Psmc2	exon	ENSMUSG00000028932	ProperStrand	27	chr7	52381972	52382013	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	2	-13.2723
chr4	119258425	119275066	protein_coding	Foxj3	exon	ENSMUSG00000032998	ProperStrand	9	chr7	116664809	116664899	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-6.1874
chr11	80415108	80415125	protein_coding	Myo1d	exon	ENSMUSG00000035441	ProperStrand	144	chr3	144368489	144368505	protein_coding	Sh3glb1	exon	ENSMUSG00000037062	ProperStrand	9	1	-15.4382
chr13	44827264	44918817	protein_coding	Jarid2	exon	ENSMUSG00000038518	ProperStrand	372	chr5	108336382	108336462	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-1.6490
chr19	44188366	44188472	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr6	115757998	115758103	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	3	-2.7111
chr17	56107026	56107043	protein_coding	Ccdc94	exon	ENSMUSG00000003208	ProperStrand	14	chr4	131865868	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.3681
chrX	100775737	100775796	non_coding	B230206F22Rik	.	ENSMUSG00000086370	ProperStrand	9	chr10	23505152	23505178	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.5477
chr2	26493438	26493518	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr15	98356788	98356878	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	1	-1.2470
chr4	3550028	3550108	LTR	MTA_Mm	MaLR	chr4MTA_Mm3549901	NonProperStrand	1	chr4	3549762	3549852	LTR	RMER17B	ERVK	chr4RMER17B3549240	ProperStrand	1	1	-inf
chr19	47341949	47341965	protein_coding	Sh3pxd2a	exon	ENSMUSG00000053617	ProperStrand	57	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-9.0296
chr19	41992777	41992822	protein_coding	Pgam1	utr3	ENSMUSG00000011752	ProperStrand	124	chr17	6232006	6232022	protein_coding	Tulp4	exon	ENSMUSG00000034377	NonProperStrand	265	1	-8.8809
chr15	76337064	76342035	protein_coding	Dgat1	exon	ENSMUSG00000022555	ProperStrand	25	chr4	131866169	131866259	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	6	-20.9558
chr18	46937959	46937976	protein_coding	Ap3s1	intron	ENSMUSG00000024480	ProperStrand	8	chr7	116663682	116663710	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-6.3908
chr17	27696587	27696632	protein_coding	Hmga1	exon	ENSMUSG00000046711	ProperStrand	180	chr11	62416593	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-5.3351
chr11	50198217	50198686	protein_coding	Hnrnph1	exon	ENSMUSG00000007850	ProperStrand	49	chr16	23110527	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.8132
chr14	27449491	27449581	protein_coding	Fam116a	utr3	ENSMUSG00000040818	ProperStrand	23	chr5	130295440	130295520	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-7.1500
chr11	116535952	116535982	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr11	48616641	48616706	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	2	-3.9889
chr14	22490834	22490874	protein_coding	Myst4	utr3	ENSMUSG00000021767	ProperStrand	151	chr4	131908236	131908273	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-0.8625
chr9	98494517	98494548	protein_coding	Mrps22	exon	ENSMUSG00000032459	ProperStrand	2	chr16	23110909	23110999	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr13	54782052	54782152	protein_coding	Rnf44	utr3	ENSMUSG00000034928	ProperStrand	90	chr4	116826700	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-5.9811
chr13	34436391	34436407	protein_coding	Slc22a23	utr5	ENSMUSG00000038267	NonProperStrand	21	chr11	120208417	120208442	protein_coding	Actg1	exon	ENSMUSG00000062825	ProperStrand	178	1	-13.2592
chr15	99239883	99239983	protein_coding	Tmbim6	utr3	ENSMUSG00000023010	ProperStrand	64	chr17	35299560	35299633	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	5	-18.3638
chr7	13610827	13615656	protein_coding	Trim28	exon	ENSMUSG00000005566	ProperStrand	296	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-1.6468
chr1	95326003	95326049	protein_coding	Hdlbp	exon	ENSMUSG00000034088	ProperStrand	97	chr4	131908256	131908346	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.7982
chr13	9833552	9833618	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr4	82871426	82871448	protein_coding	Ttc39b	utr3	ENSMUSG00000038172	ProperStrand	78	1	-4.4504
chr10	126954476	126954586	protein_coding	Shmt2	utr3	ENSMUSG00000025403	ProperStrand	94	chr1	162968464	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-5.2012
chr10	90580908	90580953	protein_coding	Slc25a3	exon	ENSMUSG00000061904	ProperStrand	74	chr8	129468852	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	2	-6.7467
chr7	52714504	52714551	protein_coding	Ftl1	exon	ENSMUSG00000050708	NonProperStrand	7	chr13	21809496	21809597	protein_coding	Hist1h3h	utr5	ENSMUSG00000069312	NonProperStrand	1	1	-inf
chr9	31937211	32008478	protein_coding	Arhgap32	utr5	ENSMUSG00000041444	ProperStrand	37	chr16	23110454	23110572	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	4	-11.3127
chr18	59490475	59490492	protein_coding	Chsy3	intron	ENSMUSG00000058152	ProperStrand	35	chr13	51743567	51743631	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-7.9373
chr6	42629313	42629329	protein_coding	Fam115a	exon	ENSMUSG00000036667	NonProperStrand	7	chr19	8963026	8963126	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-15.2943
chr18	10052133	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr6	13820663	13820680	protein_coding	2610001J05Rik	exon	ENSMUSG00000052419	NonProperStrand	13	1	-11.9131
chr11	58123516	58123592	protein_coding	Zfp692	exon	ENSMUSG00000037243	ProperStrand	4	chr15	82684367	82684467	protein_coding	Tcf20	exon	ENSMUSG00000041852	ProperStrand	658	1	-14.1983
chr17	71345609	71346134	protein_coding	Myl12a	exon	ENSMUSG00000024048	ProperStrand	29	chr18	35716831	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	15	-inf
chr2	117110757	117110818	protein_coding	Rasgrp1	exon	ENSMUSG00000027347	ProperStrand	10	chr11	103238533	103238550	protein_coding	Plekhm1	exon	ENSMUSG00000034247	ProperStrand	23	1	-18.7879
chr2	129998796	129998886	protein_coding	Snrpb	exon	ENSMUSG00000027404	ProperStrand	21	chr7	29136542	29136622	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.2792
chr7	52331748	52331765	protein_coding	Nosip	exon	ENSMUSG00000003421	ProperStrand	27	chr4	131908236	131908344	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-7.1402
chr8	44381103	44381162	protein_coding	Zfp42	exon	ENSMUSG00000051176	ProperStrand	127	chr3	108357358	108357439	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	4	-10.7081
chr2	130267981	130268081	protein_coding	Vps16	exon	ENSMUSG00000027411	ProperStrand	25	chr11	62416575	62416621	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-6.8981
chr2	90235315	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	46660614	46660712	protein_coding	Tbc1d2	intron	ENSMUSG00000039813	ProperStrand	12	1	-7.6663
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr18	34761356	34761377	protein_coding	Brd8	utr3	ENSMUSG00000003778	ProperStrand	27	1	-10.2165
chr2	146125208	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	chr16	23111692	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	10	-11.4854
chrX	103281802	103281892	protein_coding	Atp7a	exon	ENSMUSG00000033792	ProperStrand	3	chr9	120039606	120039686	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-9.5119
chr2	90235315	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	52271370	52271387	protein_coding	Gls	exon	ENSMUSG00000026103	NonProperStrand	7	1	-8.8025
chrX	91359574	91368409	protein_coding	Zfx	utr5	ENSMUSG00000079509	ProperStrand	6	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-7.7732
chr13	42193634	42193665	protein_coding	Hivep1	intron	ENSMUSG00000021366	ProperStrand	24	chr7	140264599	140264666	protein_coding	Ctbp2	intron	ENSMUSG00000030970	ProperStrand	89	2	-20.3690
chr3	95077799	95077879	protein_coding	Prune	intron	ENSMUSG00000015711	ProperStrand	21	chr12	113748415	113748505	protein_coding	Tmem179	intron	ENSMUSG00000054013	NonProperStrand	2	1	-inf
chr8	108233712	108233729	protein_coding	4933405L10Rik	exon	ENSMUSG00000013158	ProperStrand	94	chr6	136758178	136758195	protein_coding	H2afj	utr3	ENSMUSG00000060032	ProperStrand	25	1	-14.1790
chr11	119136228	119136244	protein_coding	Gaa	exon	ENSMUSG00000025579	NonProperStrand	201	chr6	124772570	124772618	protein_coding	Usp5	exon	ENSMUSG00000038429	ProperStrand	35	1	-11.9774
chr5	116032347	116033410	protein_coding	Gcn1l1	exon	ENSMUSG00000041638	ProperStrand	408	chrX	34622906	34623024	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-0.9726
chr5	136210094	136210267	protein_coding	Por	exon	ENSMUSG00000005514	ProperStrand	42	chr1	162966818	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	3	-15.8004
chr8	75177456	75180961	protein_coding	Nwd1	exon	ENSMUSG00000048148	ProperStrand	46	chr4	131908690	131908808	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.6050
chr10	34116820	34116837	protein_coding	Nt5dc1	intron	ENSMUSG00000039480	ProperStrand	16	chr7	117189864	117189910	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-8.8687
chr1	162286088	162286104	protein_coding	Rabgap1l	intron	ENSMUSG00000026721	ProperStrand	44	chr5	122304436	122304452	protein_coding	Fam109a	utr3	ENSMUSG00000044134	ProperStrand	12	1	-17.3669
chr9	15118256	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	chr12	110887828	110887893	snoRNA	ENSMUSG00000084549_SNORD113	.	ENSMUSG00000084549	ProperStrand	196	5	-8.0402
chr8	112576416	112576432	LINE	L1_Mus3	L1	chr8L1_Mus3112576213	ProperStrand	24	chr1	162966189	162966212	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-9.4214
chr13	51654819	51654836	protein_coding	Shc3	intron	ENSMUSG00000021448	ProperStrand	50	chr11	106362334	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-6.2018
chr5	147647470	147647512	protein_coding	Rpl21	exon	ENSMUSG00000041453	ProperStrand	112	chr6	124691242	124691303	protein_coding	Grcc10	utr5	ENSMUSG00000072772	ProperStrand	88	3	-19.7982
chr13	76341035	76341055	protein_coding	Fam81b	intron	ENSMUSG00000078966	NonProperStrand	220	chr17	35089238	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-3.0396
chrX	99445995	99446012	protein_coding	Cited1	utr5	ENSMUSG00000051159	ProperStrand	72	chr16	23111447	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.0185
chr11	93986768	93986858	protein_coding	Spag9	utr3	ENSMUSG00000020859	ProperStrand	23	chr2	26493405	26493485	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-5.5917
chr14	20703008	20703108	protein_coding	Gng2	intron	ENSMUSG00000043004	ProperStrand	15	chr1	162965555	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.9503
chrX	34622960	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	chr17	71990923	71990974	snoRNA	ENSMUSG00000092713_CT010429.1	.	ENSMUSG00000092713	ProperStrand	182	1	-1.3557
chr7	149358878	149358897	LTR	RLTR16	ERVK	chr7RLTR16149358748	ProperStrand	1	chr16	23111450	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-inf
chr7	148633555	148633603	protein_coding	Rplp2	utr5	ENSMUSG00000025508	ProperStrand	106	chr7	118219668	118219740	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-3.1192
chr1	132639190	132639208	protein_coding	AA986860	exon	ENSMUSG00000042510	ProperStrand	15	chr9	15130729	15130807	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	4	-19.5137
chr4	126710126	126710210	protein_coding	Sfpq	intron	ENSMUSG00000028820	ProperStrand	340	chr2	158185532	158185622	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-3.1765
chr4	139020521	139020598	protein_coding	Ubr4	exon	ENSMUSG00000066036	ProperStrand	304	chr10	110918574	110918664	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-0.8887
chr5	134614687	134614703	protein_coding	Gatsl2	utr3	ENSMUSG00000015944	ProperStrand	8	chr1	58116010	58116027	protein_coding	Aox1	exon	ENSMUSG00000063558	ProperStrand	20	1	-18.8046
chr17	6232006	6232022	protein_coding	Tulp4	exon	ENSMUSG00000034377	NonProperStrand	265	chr3	109784605	109784624	protein_coding	Ntng1	intron	ENSMUSG00000059857	NonProperStrand	6	1	-15.0945
chr8	41869446	41869536	LTR	MTB_Mm	MaLR	chr8MTB_Mm41869369	NonProperStrand	1	chr8	41869740	41869820	LTR	ORR1B1	MaLR	chr8ORR1B141869688	NonProperStrand	1	1	-inf
chr11	115177710	115177726	protein_coding	Otop2	intron	ENSMUSG00000050201	ProperStrand	13	chr15	34370620	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-10.6671
chr5	137748694	137748724	protein_coding	Srrt	utr5	ENSMUSG00000037364	ProperStrand	31	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-6.5017
chr17	27845799	27845876	protein_coding	Pacsin1	utr3	ENSMUSG00000040276	ProperStrand	15	chr5	122691914	122691930	protein_coding	Hvcn1	utr3	ENSMUSG00000064267	ProperStrand	182	1	-13.9115
chr10	55058475	55058491	LINE	Lx7	L1	chr10Lx755058288	ProperStrand	1	chr17	24857716	24857775	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-inf
chr2	26877162	26877178	protein_coding	Slc2a6	utr3	ENSMUSG00000036067	ProperStrand	3	chr3	87735654	87735754	protein_coding	Isg20l2	exon	ENSMUSG00000048039	ProperStrand	10	1	-inf
chr4	101283952	101285471	protein_coding	Dnajc6	exon	ENSMUSG00000028528	ProperStrand	10	chr8	129468775	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	NonProperStrand	22	1	-19.2301
chr18	74379528	74379597	protein_coding	Cxxc1	exon	ENSMUSG00000024560	ProperStrand	44	chr11	6428035	6428098	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.7630
chr13	54723202	54723218	protein_coding	Faf2	exon	ENSMUSG00000025873	ProperStrand	90	chr6	71832634	71832669	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-4.8238
chr18	75161533	75161598	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	chr17	35087894	35087962	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	4	-2.4264
chr15	34370559	34370649	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	chr3	90279776	90279856	tRNA	tRNA792-MetCAT	.	756141	ProperStrand	42	1	-4.2181
chr2	22444184	22445168	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	chr2	26494708	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	17	-11.2968
chr5	109124122	109132306	protein_coding	Fgfrl1	exon	ENSMUSG00000008090	ProperStrand	111	chr7	30074412	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-9.1946
chr5	74489234	74489567	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	2	-1.0816
chr17	39985500	39985517	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr16	56035865	56035964	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	1	-1.9348
chr11	115443115	115443284	protein_coding	Nup85	exon	ENSMUSG00000020739	ProperStrand	33	chr8	32260357	32260437	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-5.7957
chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	chr7	52382752	52382808	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	6	-3.5170
chr4	155501201	155501291	protein_coding	9430015G10Rik	utr3	ENSMUSG00000059939	ProperStrand	17	chr17	35299531	35299611	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-7.2784
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr9	21602970	21602986	protein_coding	Kank2	utr5	ENSMUSG00000032194	ProperStrand	196	1	-3.6382
chr4	143748332	143749010	protein_coding	Oog3	exon	ENSMUSG00000050810	NonProperStrand	78	chr2	22444485	22444507	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-7.2537
chr5	121075736	121075836	protein_coding	Ddx54	exon	ENSMUSG00000029599	ProperStrand	104	chr1	183106211	183106228	protein_coding	Wdr26	utr3	ENSMUSG00000038733	NonProperStrand	1	1	-inf
chr15	81602860	81602925	protein_coding	Zc3h7b	exon	ENSMUSG00000022390	ProperStrand	35	chr19	8798742	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	14	-20.2042
chr12	85713405	85713428	protein_coding	Coq6	exon	ENSMUSG00000021235	ProperStrand	15	chr5	143722220	143722330	protein_coding	Fscn1	exon	ENSMUSG00000029581	ProperStrand	200	4	-21.5245
chr17	35209110	35209129	protein_coding	Ly6g6d	intron	ENSMUSG00000073413	NonProperStrand	3	chr4	132394426	132394448	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	1	-15.5450
chr3	88163100	88163541	protein_coding	Smg5	exon	ENSMUSG00000001415	ProperStrand	70	chr19	17900101	17900117	snoRNA	ENSMUSG00000089540_snoU13	.	ENSMUSG00000089540	ProperStrand	99	1	-11.9974
chr11	69477789	69477840	protein_coding	Cd68	utr3	ENSMUSG00000018774	ProperStrand	12	chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	1	-11.7822
chr1	88427095	88427142	protein_coding	Ptma	utr3	ENSMUSG00000026238	ProperStrand	385	chr11	25752343	25752360	protein_coding	5730522E02Rik	intron	ENSMUSG00000032985	NonProperStrand	20	1	-11.8166
chr11	28276181	28276271	LINE	L1MC	L1	chr11L1MC28276188	ProperStrand	1	chr11	28276076	28276156	LTR	RMER2	ERV1	chr11RMER228275672	ProperStrand	1	1	-inf
chr8	73051744	73051761	protein_coding	Fkbp8	utr5	ENSMUSG00000019428	ProperStrand	52	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-6.1243
chr18	42381256	42385427	protein_coding	Lars	exon	ENSMUSG00000024493	ProperStrand	69	chr2	22444154	22444244	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-7.4977
chr11	9964488	9964506	LINE	Lx2	L1	chr11Lx29964471	ProperStrand	11	chr1	64080612	64080633	protein_coding	Klf7	utr3	ENSMUSG00000025959	ProperStrand	9	1	-19.9764
chr18	75161428	75161699	protein_coding	Rpl17	exon	ENSMUSG00000062328	ProperStrand	90	chr18	35102297	35102336	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	3	-13.3778
chr9	120038467	120038528	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	NonProperStrand	28	chr9	15119714	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	NonProperStrand	21	1	-16.8452
chr5	115983444	115983460	protein_coding	Pxn	intron	ENSMUSG00000029528	ProperStrand	171	chr19	8799581	8799645	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-4.7212
chr7	148446167	148446243	protein_coding	Phrf1	exon	ENSMUSG00000038611	ProperStrand	86	chr7	116664818	116664908	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	8	-17.4886
chr4	118898493	118898583	protein_coding	AU022252	utr3	ENSMUSG00000078584	ProperStrand	6	chr7	29136534	29136614	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-6.8330
chr19	3896183	3896321	protein_coding	Tcirg1	exon	ENSMUSG00000001750	ProperStrand	77	chr11	69481387	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-4.8066
chr3	87726900	87726965	protein_coding	Mrpl24	exon	ENSMUSG00000019710	ProperStrand	10	chr1	162966027	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-7.1350
chr5	54389947	54389965	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	chr10	11063464	11063480	protein_coding	Epm2a	exon	ENSMUSG00000055493	ProperStrand	28	1	-12.3223
chr15	81285810	81285875	protein_coding	Xpnpep3	utr3	ENSMUSG00000022401	ProperStrand	3	chr9	79915104	79915120	protein_coding	Senp6	utr5	ENSMUSG00000034252	ProperStrand	110	1	-18.6910
chr7	16903357	16903384	protein_coding	Bbc3	utr3	ENSMUSG00000002083	ProperStrand	9	chr11	74718977	74719010	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	2	-19.1453
chr8	122269024	122269040	protein_coding	Atp2c2	intron	ENSMUSG00000034112	NonProperStrand	2	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-15.2057
chr10	6342810	6342828	protein_coding	Mthfd1l	intron	ENSMUSG00000040675	NonProperStrand	14	chr9	15118246	15118321	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-6.2956
chr17	75578474	75578491	protein_coding	Ltbp1	exon	ENSMUSG00000001870	ProperStrand	136	chr7	116663634	116663724	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.2386
chr1	182664647	182666837	protein_coding	Acbd3	exon	ENSMUSG00000026499	ProperStrand	67	chr9	44104544	44104576	protein_coding	Hinfp	exon	ENSMUSG00000032119	ProperStrand	11	1	-16.4988
chr7	125311348	125311428	protein_coding	Smg1	exon	ENSMUSG00000030655	ProperStrand	70	chr8	98269959	98270049	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-5.2409
chrX	11616123	11616404	protein_coding	Bcor	exon	ENSMUSG00000040363	ProperStrand	20	chr11	74718963	74719010	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	1	-11.2502
chr15	68715267	68715288	SINE	MIRc	MIR	chr15MIRc68715253	ProperStrand	1	chr16	23110927	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr6	11883838	11883854	protein_coding	Phf14	exon	ENSMUSG00000029629	NonProperStrand	6	chr16	23111436	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-5.4240
chr2	130104012	130104634	protein_coding	Nop56	exon	ENSMUSG00000027405	ProperStrand	125	chr2	155970254	155970303	protein_coding	Romo1	exon	ENSMUSG00000067847	ProperStrand	3	1	-18.2248
chr5	77710040	77710130	protein_coding	Rest	exon	ENSMUSG00000029249	ProperStrand	136	chr9	65049569	65049649	snRNA	ENSMUSG00000075930_U5	.	ENSMUSG00000075930	ProperStrand	175	1	-9.5242
chr8	113447133	113486109	protein_coding	St3gal2	intron	ENSMUSG00000031749	ProperStrand	206	chr19	8963027	8963185	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	61	-inf
chr19	38869531	38869547	protein_coding	Noc3l	exon	ENSMUSG00000024999	NonProperStrand	149	chr4	131865393	131865503	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	2	-4.1955
chr16	20392855	20392945	protein_coding-noncoding	Abcc5	utr3	ENSMUSG00000022822	ProperStrand	1	chr16	20415248	20415328	protein_coding	Abcc5	intron	ENSMUSG00000022822	NonProperStrand	7	1	-inf
chr2	73234220	73234238	lincRNA	D230022J07Rik	intron	ENSMUSG00000087176	NonProperStrand	2	chr17	45704934	45705034	protein_coding	Hsp90ab1	utr3	ENSMUSG00000023944	ProperStrand	1627	2	-inf
chr10	121242090	121244926	protein_coding	Srgap1	exon	ENSMUSG00000020121	NonProperStrand	80	chr8	123196648	123196695	protein_coding	Cox4i1	exon	ENSMUSG00000031818	ProperStrand	31	1	-14.0678
chr18	75591124	75591141	protein_coding	Ctif	utr3	ENSMUSG00000052928	ProperStrand	41	chr4	131908713	131908750	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.7814
chr5	87354839	87354856	protein_coding	Ugt2b1	exon	ENSMUSG00000035836	ProperStrand	26	chr17	80623984	80625030	protein_coding	Gemin6	utr5	ENSMUSG00000055760	ProperStrand	2	1	-inf
chr11	69730684	69730706	protein_coding	Eif5a	utr3	ENSMUSG00000078812	ProperStrand	164	chr1	192712615	192712631	protein_coding	Rps6kc1	exon	ENSMUSG00000089872	ProperStrand	241	1	-8.5122
chr11	58745858	58745911	protein_coding	Rnf187	utr3	ENSMUSG00000020496	ProperStrand	26	chr18	33954817	33954907	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-5.1001
chr17	46716014	46716104	protein_coding	Ptk7	exon	ENSMUSG00000023972	ProperStrand	101	chr18	33954817	33954897	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-2.5763
chr6	32972494	32972512	protein_coding	Chchd3	intron	ENSMUSG00000053768	NonProperStrand	5	chr1	89673648	89673748	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-8.2536
chr11	69480868	69480888	protein_coding	Eif4a1	utr3	ENSMUSG00000059796	ProperStrand	108	chr11	48616640	48616709	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	3	-18.1157
chr6	28838462	28838502	protein_coding	Snd1	utr3	ENSMUSG00000001424	ProperStrand	210	chr1	162966002	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-2.7897
chr17	23694706	23694796	protein_coding	Zfp213	exon	ENSMUSG00000071256	ProperStrand	11	chr4	131865885	131865965	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.8470
chr8	122465776	122465856	protein_coding	Usp10	exon	ENSMUSG00000031826	ProperStrand	98	chr8	125413866	125413956	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	1	-8.6331
chr9	64049184	64049204	protein_coding	Map2k1	intron	ENSMUSG00000004936	ProperStrand	36	chr7	29136525	29136653	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.2650
chr7	135117526	135117562	protein_coding-noncoding	Fus	utr5	ENSMUSG00000030795	ProperStrand	4	chr5	115780660	115780760	protein_coding	Srsf9	intron	ENSMUSG00000029538	NonProperStrand	2	1	-inf
chr5	74489210	74489290	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr4	147833113	147836897	protein_coding	Mtor	exon	ENSMUSG00000028991	ProperStrand	65	1	-5.4653
chr2	179929532	179929942	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr8	113362429	113362453	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	1	-5.6873
chr17	29632149	29632223	protein_coding	Pim1	utr3	ENSMUSG00000024014	ProperStrand	13	chr17	26360452	26360542	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	1	-13.1474
chr13	21458526	21458544	protein_coding	Zscan12	exon	ENSMUSG00000036721	ProperStrand	5	chrX	19683228	19683244	protein_coding	Slc9a7	exon	ENSMUSG00000037341	NonProperStrand	136	1	-16.7822
chr9	57322166	57322237	LTR	RMER17B	ERVK	chr9RMER17B57321803	NonProperStrand	1	chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-inf
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr1	182666937	182666954	protein_coding	Acbd3	exon	ENSMUSG00000026499	ProperStrand	67	1	-5.6870
chr3	95749178	95749268	protein_coding	Anp32e	utr3	ENSMUSG00000015749	ProperStrand	25	chr1	89673651	89673731	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-4.9205
chr14	31408911	31408981	protein_coding	Prkcd	utr3	ENSMUSG00000021948	ProperStrand	9	chr3	68889022	68889122	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-6.9792
chr1	74732541	74732903	protein_coding	Ttll4	exon	ENSMUSG00000033257	ProperStrand	24	chr18	35102320	35102368	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-8.4269
chr11	97552614	97552652	protein_coding	Pcgf2	intron	ENSMUSG00000018537	ProperStrand	31	chr2	26494762	26494826	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.3375
chrX	155988614	156024634	protein_coding	A830080D01Rik	intron	ENSMUSG00000044150	ProperStrand	102	chr16	23110919	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-0.8947
chr4	138931090	138931326	protein_coding	C230096C10Rik	exon	ENSMUSG00000078517	ProperStrand	69	chr2	158182156	158182192	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-4.7328
chr18	31837097	31837187	protein_coding	Sap130	intron	ENSMUSG00000024260	ProperStrand	32	chr16	23111721	23111801	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.9714
chr16	34549713	34549734	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-6.5479
chr8	26837745	26837835	protein_coding	Ddhd2	utr3	ENSMUSG00000061313	ProperStrand	5	chr4	131908363	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-6.0411
chr17	66693422	66710170	protein_coding	1110012J17Rik	exon	ENSMUSG00000052105	ProperStrand	60	chr11	69483136	69483248	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	9	-inf
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr16	23111374	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	22	-2.5342
chr4	130309960	130310040	protein_coding	Pum1	exon	ENSMUSG00000028580	ProperStrand	131	chr11	6428077	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.8635
chr4	131866565	131866599	lincRNA	Snhg12	exon	ENSMUSG00000086290	ProperStrand	178	chr4	131866599	131866679	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	3	-15.6701
chr9	70266633	70266826	protein_coding	Ccnb2	exon	ENSMUSG00000032218	ProperStrand	54	chr4	131908235	131908295	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.5731
chr2	130265640	130266053	protein_coding	Vps16	exon	ENSMUSG00000027411	ProperStrand	25	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-5.2686
chr9	30897585	30898031	protein_coding	St14	exon	ENSMUSG00000031995	ProperStrand	90	chr18	35716834	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.5346
chr8	106878410	106878465	protein_coding	Cmtm4	utr3	ENSMUSG00000051578	ProperStrand	6	chr4	131865867	131865898	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-6.1051
chr8	113527814	113527863	protein_coding	Ddx19b	utr3	ENSMUSG00000033658	ProperStrand	30	chr16	23110913	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0481
chr15	31422502	31425782	protein_coding	March6	exon	ENSMUSG00000039100	ProperStrand	94	chr4	131865941	131865989	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.1229
chr1	138178661	138178677	protein_coding	Camsap2	exon	ENSMUSG00000041570	NonProperStrand	116	chr11	6428103	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.0573
chr3	96073683	96073706	protein_coding	Hist2h2bb	exon	ENSMUSG00000050936	ProperStrand	57	chr1	162968486	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-6.1802
chr15	102324406	102324468	protein_coding	Pcbp2	intron	ENSMUSG00000056851	ProperStrand	164	chr12	88778631	88778723	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-4.5405
chrX	110412694	110412717	protein_coding	Dach2	intron	ENSMUSG00000025592	NonProperStrand	1	chr12	106177280	106177298	protein_coding	4831426I19Rik	intron	ENSMUSG00000054150	ProperStrand	5	1	-inf
chr10	80641699	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	chr9	40612854	40612905	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	1	-3.8913
chr3	97011210	97011254	protein_coding	Bcl9	exon	ENSMUSG00000038256	ProperStrand	94	chr2	26493383	26493483	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-2.9258
chr2	90235286	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	45723144	45723160	protein_coding	Clint1	utr3	ENSMUSG00000006169	NonProperStrand	273	4	-6.9687
chr11	95466619	95466699	LTR	RMER16-int	ERVK	chr11RMER16-int95464812	NonProperStrand	1	chr11	95466908	95466998	LTR	RMER16-int	ERVK	chr11RMER16-int95466912	NonProperStrand	1	1	-inf
chr4	116875221	116875248	snRNA	ENSMUSG00000070228_U5	.	ENSMUSG00000070228	ProperStrand	131	chr5	108334201	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-3.3528
chr7	31360509	31360546	protein_coding	Wbp7	exon	ENSMUSG00000006307	ProperStrand	180	chr4	131865857	131865947	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-1.6817
chr5	140857296	140857313	protein_coding	Snx8	intron	ENSMUSG00000029560	ProperStrand	106	chr4	132394436	132394462	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	1	-7.9998
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr17	88983211	88987033	protein_coding	Klraq1	exon	ENSMUSG00000034709	ProperStrand	6	1	-11.1038
chr6	67251646	67251746	protein_coding	Il12rb2	intron	ENSMUSG00000018341	NonProperStrand	11	chr2	130101257	130101310	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-10.0333
chr11	59241945	59242020	protein_coding	Snap47	exon	ENSMUSG00000009894	ProperStrand	19	chr18	35716754	35716844	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.2504
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr5	125783515	125784567	protein_coding	Scarb1	exon	ENSMUSG00000037936	ProperStrand	18	5	-20.6399
chr17	10399821	10399911	protein_coding	Qk	utr3	ENSMUSG00000062078	ProperStrand	63	chr3	123210903	123210983	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-3.6022
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	75484537	75484553	protein_coding	Obsl1	exon	ENSMUSG00000026211	NonProperStrand	192	2	-4.1686
chr14	56110571	56110588	protein_coding	Lrrc16b	intron	ENSMUSG00000022211	NonProperStrand	1	chr4	131908380	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-inf
chr16	85795631	85795647	protein_coding	Adamts1	utr3	ENSMUSG00000022893	ProperStrand	102	chr5	121655017	121655098	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.7868
chr11	100275659	100275677	protein_coding	Leprel4	exon	ENSMUSG00000006931	ProperStrand	32	chr19	45627558	45627618	protein_coding	Poll	exon	ENSMUSG00000025218	ProperStrand	2	1	-inf
chr19	30249575	30249665	protein_coding	Gldc	exon	ENSMUSG00000024827	ProperStrand	175	chr18	35714194	35714256	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	4	-6.5340
chr2	119160601	119160617	protein_coding	Dll4	utr3	ENSMUSG00000027314	ProperStrand	6	chr18	35716830	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-6.6008
chr2	105012751	105012769	protein_coding	Wt1	utr3	ENSMUSG00000016458	NonProperStrand	338	chr2	11512427	11516995	protein_coding	Rbm17	exon	ENSMUSG00000037197	ProperStrand	50	1	-10.2165
chr3	156224612	156224628	lincRNA	4930570G19Rik	exon	ENSMUSG00000085084	ProperStrand	326	chr19	45053679	45055058	protein_coding	Fam178a	exon	ENSMUSG00000036097	ProperStrand	29	1	-11.3911
chr11	96679215	96679260	protein_coding	Nfe2l1	utr3	ENSMUSG00000038615	ProperStrand	118	chr4	131865865	131865955	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.7083
chr7	124706863	124706953	protein_coding	Xylt1	intron	ENSMUSG00000030657	ProperStrand	9	chr7	111595485	111595565	protein_coding	Trim30a	intron	ENSMUSG00000030921	NonProperStrand	1	1	-inf
chr9	57385425	57385441	protein_coding	2310046O06Rik	utr5	ENSMUSG00000032305	ProperStrand	135	chr4	116827126	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-5.4445
chr12	70683855	70683871	protein_coding	Mettl21d	exon	ENSMUSG00000049882	ProperStrand	1	chr10	23505205	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-inf
chr11	114530260	114533059	protein_coding	Rpl38	exon	ENSMUSG00000057322	ProperStrand	29	chr19	8963051	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.5658
chr4	147914464	147914564	protein_coding	Mtor	exon	ENSMUSG00000028991	ProperStrand	65	chr5	130300498	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-4.2113
chr16	7047729	7047746	protein_coding	Rbfox1	intron	ENSMUSG00000008658	NonProperStrand	7	chr7	29136599	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-15.4988
chr11	100649800	100650067	protein_coding	Stat5b	exon	ENSMUSG00000020919	ProperStrand	7	chr3	88713924	88713981	protein_coding	Gon4l	utr3	ENSMUSG00000054199	ProperStrand	1260	1	-11.6453
chr14	76245604	76245622	protein_coding-noncoding	Tpt1	utr5	ENSMUSG00000060126	NonProperStrand	5	chr14	31827477	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-12.0933
chr7	109283121	109283164	protein_coding	Nup98	exon	ENSMUSG00000063550	ProperStrand	100	chrX	34622906	34622984	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	5	-10.8664
chr10	121242090	121244926	protein_coding	Srgap1	exon	ENSMUSG00000020121	NonProperStrand	80	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.3420
chr1	90168361	90168451	protein_coding	Hjurp	intron	ENSMUSG00000044783	ProperStrand	110	chr17	24857717	24857797	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.3560
chr9	95390561	95390599	protein_coding	2610101N10Rik	exon	ENSMUSG00000032407	ProperStrand	56	chr13	51743568	51743653	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-6.9972
chr3	83570497	83570513	protein_coding	Sfrp2	exon	ENSMUSG00000027996	NonProperStrand	32	chr7	116663712	116663764	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.6411
chr2	145076803	145209256	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	chr17	39985663	39985763	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-1.0503
chr4	134779451	134781968	protein_coding	Clic4	exon	ENSMUSG00000037242	ProperStrand	84	chr1	162966010	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-2.9920
chr14	106292110	106292163	protein_coding	Spry2	exon	ENSMUSG00000022114	ProperStrand	22	chr11	69483190	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.2846
chr17	71344093	71345489	protein_coding	Myl12a	exon	ENSMUSG00000024048	ProperStrand	29	chr3	123210885	123210975	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.3336
chr4	118964607	118964639	protein_coding	Ybx1	intron	ENSMUSG00000028639	ProperStrand	171	chr18	35714219	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	4	-6.6358
chr15	34069552	34069598	protein_coding	Mtdh	exon	ENSMUSG00000022255	ProperStrand	37	chr9	92440258	92440274	protein_coding	Plod2	intron	ENSMUSG00000032374	ProperStrand	52	1	-14.5710
chr5	35251674	35251703	protein_coding	Htt	utr3	ENSMUSG00000029104	ProperStrand	73	chr11	68886928	68886986	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	2	-6.3791
chr10	116347217	116347404	protein_coding	Rab3ip	exon	ENSMUSG00000064181	ProperStrand	18	chr10	110918616	110918693	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-5.7690
chr11	6519815	6519915	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	chr9	64023680	64023746	snoRNA	ENSMUSG00000064918_SNORD18	.	ENSMUSG00000064918	ProperStrand	370	5	-17.5094
chr16	21285384	21285403	lincRNA	Gm16863	intron	ENSMUSG00000086616	NonProperStrand	4	chr11	97623427	97623475	protein_coding	Cwc25	intron	ENSMUSG00000018541	ProperStrand	4	1	-inf
chr1	194571806	194571881	snRNA	ENSMUSG00000064881_U5	.	ENSMUSG00000064881	ProperStrand	187	chr19	8963026	8963082	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	4	-3.5599
chr2	35575721	35575779	protein_coding	Dab2ip	exon	ENSMUSG00000026883	ProperStrand	93	chr5	139816660	139816708	protein_coding	Cox19	intron	ENSMUSG00000045438	NonProperStrand	1	1	-inf
chr7	26057526	26057544	protein_coding	Cic	exon	ENSMUSG00000005442	ProperStrand	80	chrX	71268736	71268752	protein_coding	Irak1	exon	ENSMUSG00000031392	NonProperStrand	18	1	-15.1757
chr10	114180454	114180471	protein_coding	Trhde	intron	ENSMUSG00000050663	NonProperStrand	2	chr17	35089182	35089229	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-12.9029
chr14	64829132	64829149	protein_coding	Msra	intron	ENSMUSG00000054733	NonProperStrand	84	chr4	116827121	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-6.3739
chr6	118348169	118353151	protein_coding	Bms1	exon	ENSMUSG00000030138	ProperStrand	107	chr7	133939507	133939608	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	10	-inf
chr16	64851346	64851369	Simple_repeat	(CCG)n	Simple_repeat	chr16(CCG)n64851329	NonProperStrand	15	chr16	23110470	23110560	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-12.1181
chr2	173102129	173102147	Low_complexity	GC_rich	Low_complexity	chr2GC_rich173102067	NonProperStrand	5	chr6	87769189	87769558	protein_coding	Isy1	exon	ENSMUSG00000030056	ProperStrand	172	1	-16.3034
chr4	130600741	130600758	LTR	MTE2a	MaLR	chr4MTE2a130600703	NonProperStrand	21	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-9.8582
chr15	102238318	102261303	protein_coding	Sp1	exon	ENSMUSG00000001280	ProperStrand	124	chr17	24665421	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	7	-inf
chr2	127627164	127628763	protein_coding	Bub1	exon	ENSMUSG00000027379	ProperStrand	26	chr5	108336376	108336491	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	5	-inf
chr2	70927899	70927916	protein_coding	Dcaf17	exon	ENSMUSG00000041966	NonProperStrand	89	chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	1	-7.9747
chr5	148113281	148113297	protein_coding	Cdx2	utr3	ENSMUSG00000029646	ProperStrand	276	chr9	15119649	15119675	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-1.1077
chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	chr7	117189864	117189933	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-2.9205
chr10	127798677	127798721	protein_coding	Cs	utr3	ENSMUSG00000005683	ProperStrand	63	chr2	130102057	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-5.2615
chr10	17547610	17547626	protein_coding	Txlnb	exon	ENSMUSG00000039891	ProperStrand	70	chr2	158182156	158182197	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-4.7051
chr6	125121917	125121944	protein_coding	Ncapd2	exon	ENSMUSG00000038252	ProperStrand	170	chr16	23111733	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-3.0822
chrX	132673816	132673833	protein_coding	Bex4	intron	ENSMUSG00000047844	NonProperStrand	70	chr4	131908809	131908891	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-2.0219
chr9	59518378	59518438	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr7	16524110	16524187	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	1	-3.7072
chr10	92986906	92986924	protein_coding	Amdhd1	utr3	ENSMUSG00000015890	NonProperStrand	2	chr11	70769718	70769768	protein_coding	Nup88	exon	ENSMUSG00000040667	ProperStrand	17	1	-inf
chr4	120225613	120226562	protein_coding	Ctps	exon	ENSMUSG00000028633	NonProperStrand	24	chr17	26360445	26360572	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	4	-inf
chr13	3599577	3610064	protein_coding	BC016423	utr5	ENSMUSG00000033799	ProperStrand	15	chr8	80758292	80758310	protein_coding	Ttc29	intron	ENSMUSG00000037101	ProperStrand	22	1	-18.3168
chr2	164287004	164288865	protein_coding	Sys1	exon	ENSMUSG00000045503	ProperStrand	6	chr8	73419657	73419726	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-7.7047
chr4	116826699	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	chr15	5068445	5068480	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	2	-1.2577
chr2	181384240	181384257	protein_coding	Prpf6	exon	ENSMUSG00000002455	ProperStrand	54	chr6	131329419	131329451	protein_coding	Csda	exon	ENSMUSG00000030189	ProperStrand	86	1	-12.8037
chr5	100855943	100855969	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr18	16790804	16790820	protein_coding	Cdh2	exon	ENSMUSG00000024304	ProperStrand	71	1	-6.3049
chr2	90235304	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	97253835	97253854	protein_coding	Frmd4b	intron	ENSMUSG00000030064	NonProperStrand	25	1	-6.1754
chr12	36219400	36219416	protein_coding	Ahr	utr5	ENSMUSG00000019256	NonProperStrand	64	chr11	62416948	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-5.9161
chr2	131068915	131068931	protein_coding	Mavs	exon	ENSMUSG00000037523	NonProperStrand	7	chr11	69481385	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-12.1751
chr10	77080045	77080098	protein_coding	Sumo3	utr3	ENSMUSG00000020265	ProperStrand	31	chr11	62416606	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	3	-14.8282
chr9	114421201	114421253	protein_coding	Trim71	utr3	ENSMUSG00000079259	ProperStrand	162	chr18	35714220	35714246	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-1.7483
chr11	48615265	48617788	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	chr4	131908688	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	6	-0.8345
chr10	110222770	110222860	protein_coding	E2f7	utr3	ENSMUSG00000020185	ProperStrand	30	chr16	23110916	23110996	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0481
chr13	19684241	19684258	protein_coding	Epdr1	utr3	ENSMUSG00000002808	ProperStrand	46	chr11	68067261	68067277	protein_coding	Ntn1	intron	ENSMUSG00000020902	NonProperStrand	194	1	-11.4951
chr5	122773160	122773176	protein_coding	Pptc7	utr3	ENSMUSG00000038582	NonProperStrand	19	chr17	35088971	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-8.1695
chr13	49162633	49162650	protein_coding	Wnk2	exon	ENSMUSG00000037989	NonProperStrand	67	chr16	23110526	23110578	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.2755
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	132213625	132213642	protein_coding	Auts2	intron	ENSMUSG00000029673	ProperStrand	71	1	-4.1428
chr17	15901847	15901937	protein_coding	Chd1	exon	ENSMUSG00000023852	ProperStrand	82	chr11	69481345	69481425	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	5	-12.1016
chr1	180267143	180267199	protein_coding	Hnrnpu	exon	ENSMUSG00000039630	ProperStrand	286	chr2	38857245	38857274	protein_coding	Rpl35	exon	ENSMUSG00000062997	ProperStrand	68	2	-15.6761
chr3	153574575	153574654	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	chr11	69483135	69483273	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	5	-2.4776
chr10	80644633	80644723	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr2	158184131	158184211	snoRNA	ENSMUSG00000064995_SNORA71	.	ENSMUSG00000064995	ProperStrand	430	1	-2.4228
chr4	131908236	131908356	lincRNA	Gm17300	exon	ENSMUSG00000091021	ProperStrand	109	chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	ProperStrand	8	1	-16.2258
chr6	24087051	24087067	protein_coding	Slc13a1	exon	ENSMUSG00000029700	ProperStrand	1	chr8	129489394	129489410	protein_coding	Rbm34	exon	ENSMUSG00000033931	ProperStrand	22	1	-inf
chr2	163260511	163260527	SINE	B4A	B4	chr2B4A163260433	ProperStrand	1	chr4	131908754	131908808	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-inf
chr19	25016725	25016791	snoRNA	ENSMUSG00000064896_SNORA19	.	ENSMUSG00000064896	ProperStrand	88	chr5	74489575	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-3.0773
chr1	92506770	92507561	protein_coding	Cops8	exon	ENSMUSG00000034432	ProperStrand	9	chr6	71832629	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-9.4562
chr6	30254518	30254541	protein_coding	Ube2h	utr5	ENSMUSG00000039159	ProperStrand	96	chr2	26768049	26768107	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	2	-11.9442
chr2	144412654	144412693	protein_coding	Sec23b	exon	ENSMUSG00000027429	ProperStrand	42	chr18	33954817	33954907	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-4.1732
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr5	121655017	121655155	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	8	-2.7332
chr12	111931668	111931940	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chrX	45559492	45559558	protein_coding	Zdhhc9	intron	ENSMUSG00000036985	ProperStrand	32	1	-9.5245
chr14	56159295	56159312	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	chr5	147646750	147646849	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	1	-5.6196
chr2	47962755	47962773	lincRNA	Gm13481	intron	ENSMUSG00000086353	NonProperStrand	36	chr4	148608879	148608898	protein_coding	Kif1b	utr3	ENSMUSG00000063077	ProperStrand	60	2	-inf
chr6	4704898	4704948	protein_coding	Peg10	exon	ENSMUSG00000092035	ProperStrand	102	chr19	8963086	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-4.2596
chr3	65186263	65186327	protein_coding	Ssr3	utr3	ENSMUSG00000027828	ProperStrand	24	chr18	35716848	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-9.4498
chr4	133278864	133278900	protein_coding	Arid1a	exon	ENSMUSG00000007880	ProperStrand	465	chr3	30894841	30894857	protein_coding	Prkci	utr5	ENSMUSG00000037643	NonProperStrand	1	1	-inf
chr19	7289818	7289905	protein_coding	Cox8a	utr3	ENSMUSG00000035885	ProperStrand	32	chr11	97642981	97643071	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.5978
chr13	98265075	98265135	lincRNA	Gm11019	exon	ENSMUSG00000078952	ProperStrand	113	chr9	65578891	65578991	protein_coding	Zfp609	exon	ENSMUSG00000040524	ProperStrand	87	1	-11.2952
chr5	111158933	111162788	protein_coding	Ep400	exon	ENSMUSG00000029505	ProperStrand	176	chr6	115757992	115758044	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	2	-5.8368
chr1	55056990	55057104	protein_coding	Sf3b1	exon	ENSMUSG00000025982	ProperStrand	158	chr11	6428123	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-2.9316
chr7	36388906	36389233	protein_coding	Ankrd27	exon	ENSMUSG00000034867	ProperStrand	132	chr8	48279213	48279267	protein_coding	Stox2	exon	ENSMUSG00000038143	ProperStrand	12	1	-15.0139
chr17	45705194	45705284	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr12	88778666	88778746	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-0.7940
chr11	102294587	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr9	120039581	120039683	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	3	-1.2405
chr17	25108451	25108541	protein_coding	Cramp1l	exon	ENSMUSG00000038002	ProperStrand	22	chr17	24857740	24857820	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.1130
chr15	79091704	79091890	protein_coding	Baiap2l2	exon	ENSMUSG00000018126	ProperStrand	2	chr15	72933374	72933474	protein_coding	Eif2c2	utr3	ENSMUSG00000036698	ProperStrand	154	1	-19.4488
chr8	110932894	110932910	LINE	L1M5	L1	chr8L1M5110932771	ProperStrand	1	chr2	167836656	167836680	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	1	-inf
chr1	121458185	121458202	protein_coding	Epb4.1l5	intron	ENSMUSG00000026383	NonProperStrand	28	chr1	162965530	162965590	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.7132
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr18	37911790	37911806	protein_coding	Pcdhga9	intron	ENSMUSG00000023036	ProperStrand	245	1	-5.0282
chr15	37934109	37934373	protein_coding	Ubr5	exon	ENSMUSG00000037487	ProperStrand	258	chr16	23110456	23110536	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	19	-inf
chr11	30000590	30000690	protein_coding	Spnb2	exon	ENSMUSG00000020315	ProperStrand	103	chr1	162968225	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-5.7515
chr6	113876981	113877071	protein_coding	Atp2b2	intron	ENSMUSG00000030302	NonProperStrand	14	chr7	54441806	54441896	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	1	-14.5611
chr17	56558419	56558448	protein_coding	Ptprs	exon	ENSMUSG00000013236	ProperStrand	152	chr14	73543136	73543155	protein_coding	Rcbtb2	intron	ENSMUSG00000022106	NonProperStrand	3	1	-17.8561
chr18	36961593	36961663	misc_RNA	Vault	.	ENSMUSG00000065145	ProperStrand	177	chr16	23110828	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	9	-1.6412
chr11	62416575	62416598	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr1	72272877	72273001	snRNA	ENSMUSG00000075752_U2	.	ENSMUSG00000075752	ProperStrand	535	1	-4.6653
chr8	48897534	48897624	LTR	MTD	MaLR	chr8MTD48897354	ProperStrand	1	chr8	48897814	48897894	SINE	B4A	B4	chr8B4A48897822	NonProperStrand	1	1	-inf
chr9	44591821	44591837	protein_coding	Ift46	exon	ENSMUSG00000002031	ProperStrand	28	chr6	115758042	115758119	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	2	-11.2699
chr14	51427123	51427203	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr9	59516866	59518323	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	3	-4.5083
chr2	152105773	152105863	protein_coding	Csnk2a1	utr3	ENSMUSG00000074698	ProperStrand	91	chr10	110918600	110918680	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-2.7030
chr17	32338283	32366576	protein_coding	Brd4	exon	ENSMUSG00000024002	ProperStrand	121	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-4.1802
chr1	33828651	33828669	protein_coding	Zfp451	intron	ENSMUSG00000042197	NonProperStrand	393	chr18	73693110	73693136	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-2.0841
chr19	8963081	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	chr13	23392027	23392065	tRNA	tRNA97-ValCAC	.	104895	ProperStrand	52	1	-2.5173
chr16	32381495	32381517	protein_coding	Ubxn7	exon	ENSMUSG00000053774	ProperStrand	30	chr9	15118321	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	4	-15.1594
chr9	110961916	110961932	LINE	L1MA4	L1	chr9L1MA4110961845	ProperStrand	1	chr11	118064625	118064645	protein_coding	Cyth1	intron	ENSMUSG00000017132	ProperStrand	4	1	-inf
chr19	23215931	23215978	protein_coding	Klf9	utr5	ENSMUSG00000033863	ProperStrand	83	chr4	131908687	131908771	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-1.6676
chr1	93320499	93320517	protein_coding	Per2	exon	ENSMUSG00000055866	NonProperStrand	44	chr16	23111689	23111753	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-4.2851
chr5	43630047	43630103	protein_coding	Cpeb2	intron	ENSMUSG00000039782	ProperStrand	11	chr17	24857721	24857811	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-5.4831
chr16	57136879	57138160	protein_coding	Tomm70a	exon	ENSMUSG00000022752	ProperStrand	82	chr3	128995080	128995097	protein_coding	Enpep	intron	ENSMUSG00000028024	NonProperStrand	20	1	-14.9137
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-2.6463
chr9	120037989	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	chr1	172975115	172975189	tRNA	tRNA699-GlyGCC	.	18230	ProperStrand	660	5	-5.2380
chr7	13614847	13615029	protein_coding	Trim28	exon	ENSMUSG00000005566	ProperStrand	296	chr6	121423179	121423195	protein_coding	Iqsec3	utr5	ENSMUSG00000040797	NonProperStrand	139	1	-8.4327
chr11	77996560	77996607	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	chr1	9932586	9932607	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-1.1602
chr13	103680179	103680198	protein_coding	Mast4	intron	ENSMUSG00000034751	NonProperStrand	12	chr9	120039582	120039682	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-6.4506
chr1	193176774	193176797	protein_coding	Ppp2r5a	utr3	ENSMUSG00000026626	ProperStrand	16	chr7	29136613	29136653	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.8105
chr11	116938607	116938707	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	chr7	67125755	67125816	snoRNA	ENSMUSG00000089375_Snord107	.	ENSMUSG00000089375	ProperStrand	451	1	-2.3944
chr1	84774003	84779462	protein_coding	Trip12	exon	ENSMUSG00000026219	ProperStrand	248	chr8	124406095	124406113	protein_coding	Slc7a5	utr3	ENSMUSG00000040010	ProperStrand	166	2	-13.4068
chr7	150409239	150409274	protein_coding	Kcnq1	intron	ENSMUSG00000009545	NonProperStrand	133	chr17	13115655	13115715	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	1	-5.9592
chr2	113972651	113974687	protein_coding	Aqr	exon	ENSMUSG00000040383	ProperStrand	70	chr6	115758051	115758131	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-5.1717
chr2	164631246	164631286	protein_coding	Zswim3	intron	ENSMUSG00000045822	ProperStrand	9	chr7	116663640	116663759	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-6.1447
chr2	3693068	3693084	protein_coding	Fam107b	intron	ENSMUSG00000026655	NonProperStrand	15	chr4	116827339	116827388	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	1	-13.1786
chr16	8867573	8867628	LTR	RMER19A	ERVK	chr16RMER19A8867552	NonProperStrand	1	chr3	123210854	123210934	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-inf
chr8	86248422	86248563	protein_coding	Cd97	exon	ENSMUSG00000002885	ProperStrand	37	chr7	66084526	66084542	protein_coding	Atp10a	utr3	ENSMUSG00000025324	ProperStrand	37	1	-15.2518
chr17	4082093	4082646	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr9	15119661	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	4	-2.4314
chr7	53080890	53080954	protein_coding	Grwd1	utr3	ENSMUSG00000053801	ProperStrand	7	chr12	112779247	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	3	-18.8216
chr1	84889013	84889033	protein_coding	Fbxo36	intron	ENSMUSG00000073633	ProperStrand	3	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.6896
chr12	55797769	55797880	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	chr9	120039591	120039683	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	5	-0.9759
chr5	147600401	147600458	protein_coding	Usp12	intron	ENSMUSG00000029640	ProperStrand	39	chr7	118219574	118219623	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-4.9978
chr19	7274390	7274480	protein_coding-noncoding	Otub1	utr3	ENSMUSG00000024767	ProperStrand	2	chr17	35299553	35299633	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	2	-inf
chr2	25105521	25107254	protein_coding	Ndor1	exon	ENSMUSG00000006471	NonProperStrand	84	chr4	135607601	135607621	protein_coding	Rpl11	exon	ENSMUSG00000059291	ProperStrand	152	1	-10.7717
chr17	45704798	45704824	protein_coding	Hsp90ab1	utr3	ENSMUSG00000023944	ProperStrand	1627	chr5	145891173	145891228	protein_coding	Pdap1	utr3	ENSMUSG00000029623	ProperStrand	112	3	-12.7871
chr14	76956323	76956339	protein_coding	Serp2	utr5	ENSMUSG00000052584	NonProperStrand	41	chr16	23111757	23111816	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.5349
chr1	75484537	75484553	protein_coding	Obsl1	exon	ENSMUSG00000026211	NonProperStrand	192	chr7	133691298	133702417	protein_coding	Eif3c	exon	ENSMUSG00000030738	ProperStrand	92	2	-15.9796
chr1	184374536	184374820	protein_coding	Trp53bp2	exon	ENSMUSG00000026510	ProperStrand	19	chr7	52381719	52381745	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	2	-15.6776
chr1	162967537	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	chr15	71624749	71624796	snoRNA	ENSMUSG00000088895_SNORA81	.	ENSMUSG00000088895	ProperStrand	348	1	-0.7509
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr19	8799357	8799405	snoRNA	ENSMUSG00000065280_SNORD28	.	ENSMUSG00000065280	ProperStrand	269	1	-4.1127
chr11	15838596	15838686	LINE	L1Md_A	L1	chr11L1Md_A15837928	ProperStrand	1	chr7	54442365	54442455	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-inf
chr1	63225587	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	chr4	131865379	131865471	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	7	-1.4974
chr8	91566329	91566362	protein_coding	Sall1	utr5	ENSMUSG00000031665	ProperStrand	96	chr9	120038562	120038670	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.2271
chr14	76063821	76063843	protein_coding	4930564B18Rik	intron	ENSMUSG00000022002	NonProperStrand	1	chr7	4663741	4663784	protein_coding	Brsk1	intron	ENSMUSG00000035390	ProperStrand	12	1	-inf
chr3	88603787	88603865	pseudogene	5830417I10Rik	.	ENSMUSG00000078684	ProperStrand	68	chr9	64022896	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-7.7754
chr12	88501039	88501083	protein_coding	Gstz1	exon	ENSMUSG00000021033	ProperStrand	7	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-12.5984
chr12	37542834	37542863	miRNA	Mir5099	.	ENSMUSG00000092998	ProperStrand	13	chr13	13570416	13570485	protein_coding	Nid1	exon	ENSMUSG00000005397	ProperStrand	112	2	-inf
chr3	52388278	52388294	SINE	B4A	B4	chr3B4A52388218	ProperStrand	169	chr11	106362640	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-5.3653
chr17	87559223	87559313	LTR	MTB_Mm	MaLR	chr17MTB_Mm87558991	ProperStrand	1	chr4	12088740	12088820	protein_coding	Fam92a	intron	ENSMUSG00000028218	ProperStrand	1	1	-inf
chr9	95417244	95417292	LTR	MERVL-int	ERVL	chr9MERVL-int95415098	NonProperStrand	2	chr4	43505656	43505714	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	2	-inf
chr2	90235303	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	ProperStrand	24	chr19	8799580	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	NonProperStrand	1	1	-inf
chr4	117886143	117908627	protein_coding	Ptprf	exon	ENSMUSG00000033295	ProperStrand	337	chr7	148634701	148634781	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	3	-3.4842
chr15	99609753	99609784	protein_coding	Lima1	utr3	ENSMUSG00000023022	ProperStrand	159	chr16	23110539	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-3.1905
chr1	63098647	63100410	protein_coding	Ino80d	utr3	ENSMUSG00000040865	ProperStrand	70	chr16	23111451	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-2.0773
chr14	68704804	68705382	protein_coding	Nefl	exon	ENSMUSG00000022055	ProperStrand	11	chr11	69481335	69481425	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-6.5008
chr3	158076097	158076114	protein_coding	Lrrc7	utr5	ENSMUSG00000028176	NonProperStrand	13	chr1	162965529	162965615	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	4	-18.7507
chr18	59490475	59490492	protein_coding	Chsy3	intron	ENSMUSG00000058152	ProperStrand	35	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-6.9364
chr11	55252809	55252882	SINE	B1_Mus1	Alu	chr11B1_Mus155252776	ProperStrand	3	chr4	131865966	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-inf
chr12	81269463	81269887	protein_coding	Actn1	exon	ENSMUSG00000015143	ProperStrand	128	chr1	162965536	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-5.4385
chr16	89909322	89909344	protein_coding	Tiam1	intron	ENSMUSG00000002489	NonProperStrand	26	chr14	121343063	121343573	protein_coding	Ipo5	exon	ENSMUSG00000030662	ProperStrand	135	2	-20.0956
chr11	102297389	102297449	protein_coding	Grn	exon	ENSMUSG00000034708	ProperStrand	43	chr17	24857799	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	3	-7.4286
chr13	93446548	93446565	protein_coding	Serinc5	intron	ENSMUSG00000021703	ProperStrand	57	chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-6.5558
chr3	108234386	108234488	protein_coding	Sars	exon	ENSMUSG00000068739	ProperStrand	45	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-7.4053
chr7	117189961	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	chr7	52381972	52382040	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	8	-0.8620
chrX	20265713	20265761	protein_coding	Cdk16	utr5	ENSMUSG00000031065	ProperStrand	30	chr2	60263302	60263319	protein_coding	Pla2r1	intron	ENSMUSG00000054580	ProperStrand	6	1	-18.8532
chr16	17258088	17258195	protein_coding	Hic2	exon	ENSMUSG00000050240	ProperStrand	36	chr18	73693113	73693133	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	4	-21.6512
chr15	95698449	95698467	protein_coding	Ano6	intron	ENSMUSG00000064210	ProperStrand	39	chr5	121655031	121655155	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.5640
chr2	129998643	129998709	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr15	38226796	38226896	protein_coding	Klf10	exon	ENSMUSG00000037465	ProperStrand	33	1	-9.3115
chr6	3794650	3794670	SINE	B4A	B4	chr6B4A3794525	NonProperStrand	26	chr4	131908689	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-4.4968
chr4	83922249	83922339	protein_coding	Bnc2	exon	ENSMUSG00000028487	ProperStrand	76	chr11	98878377	98878457	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-5.8194
chr19	12843750	12843850	protein_coding	Zfp91	utr3	ENSMUSG00000024695	ProperStrand	16	chr16	23111432	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	5	-15.4086
chr9	14554709	14554726	protein_coding	Fut4	utr3	ENSMUSG00000049307	NonProperStrand	19	chr8	98270035	98270096	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-7.8369
chr9	44195861	44195880	protein_coding	Hyou1	exon	ENSMUSG00000032115	ProperStrand	145	chr1	162968211	162968275	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-5.0869
chr16	57391624	57391744	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr7	29136614	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	NonProperStrand	27	3	-20.2017
chr11	89845045	89845107	protein_coding	Pctp	utr3	ENSMUSG00000020553	ProperStrand	6	chr9	120039632	120039683	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	6	-inf
chr4	154010843	154010860	protein_coding	Prdm16	utr5	ENSMUSG00000039410	ProperStrand	44	chr8	73419682	73419782	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-9.1542
chr5	21251811	21252798	protein_coding	Pmpcb	exon	ENSMUSG00000029017	ProperStrand	16	chr4	131908236	131908296	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.6705
chr9	63868722	63868738	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	chr17	27693602	27696500	protein_coding	Hmga1	utr5	ENSMUSG00000046711	ProperStrand	180	1	-6.4043
chr13	73746368	73748606	protein_coding	Clptm1l	exon	ENSMUSG00000021610	ProperStrand	11	chr15	34370545	34370621	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-11.2106
chr11	97021564	97021649	protein_coding	Kpnb1	utr3	ENSMUSG00000001440	ProperStrand	197	chr7	20094140	20099552	protein_coding	Trappc6a	exon	ENSMUSG00000002043	ProperStrand	3	1	-17.3508
chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	chr2	26768049	26768072	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	1	-4.4377
chr13	70743744	70743800	protein_coding	BC018507	exon	ENSMUSG00000034525	ProperStrand	43	chr3	68889050	68889140	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-3.8727
chr5	121655016	121655153	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	chr3	85942712	85942778	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	5	-5.6982
chr11	78088306	78098279	protein_coding	2610507B11Rik	exon	ENSMUSG00000010277	ProperStrand	246	chr5	130300446	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-1.1839
chr7	29100782	29100834	protein_coding	Supt5h	exon	ENSMUSG00000003435	ProperStrand	123	chr18	35714208	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-2.1870
chr9	44216131	44216823	protein_coding	Rps25	exon	ENSMUSG00000009927	ProperStrand	42	chr16	23111392	23111472	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.7838
chr1	137345619	137346480	protein_coding	Nav1	exon	ENSMUSG00000009418	NonProperStrand	60	chr4	49527027	49527127	protein_coding	Mrpl50	utr3	ENSMUSG00000044018	ProperStrand	3	1	-20.1674
chr10	79520315	79520405	protein_coding	Sbno2	exon	ENSMUSG00000035673	ProperStrand	23	chr15	98350201	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-6.6496
chr11	88798344	88802648	protein_coding	Scpep1	exon	ENSMUSG00000000278	ProperStrand	54	chr15	82725591	82725607	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	1	-8.7336
chr7	51850998	51851014	protein_coding	Kcnc3	exon	ENSMUSG00000062785	NonProperStrand	7	chr3	123210910	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-6.1463
chr8	87533466	87533566	protein_coding	Best2	exon	ENSMUSG00000052819	ProperStrand	9	chr16	23111771	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-9.0498
chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	chr19	8799581	8799620	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-2.7434
chr11	83107805	83107870	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	chr12	81618868	81618889	snoRNA	ENSMUSG00000093141_AC163282.1	.	ENSMUSG00000093141	ProperStrand	39	2	-15.3322
chr14	31339163	31339196	protein_coding	Dcp1a	utr3	ENSMUSG00000021962	ProperStrand	20	chr9	15118332	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-5.5777
chr3	3943540	3943620	LTR	MTE-int	MaLR	chr3MTE-int3943516	NonProperStrand	1	chr7	54443149	54443239	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-inf
chr7	120448493	120448546	protein_coding	Arntl	intron	ENSMUSG00000055116	ProperStrand	14	chr11	6428089	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-9.8477
chr9	15130896	15131005	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	chr16	23110527	23110578	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	4	-1.1235
chr6	96322858	96543912	protein_coding	Fam19a1	intron	ENSMUSG00000059187	NonProperStrand	60	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-3.2523
chr6	38275294	38275312	protein_coding	Zc3hav1	exon	ENSMUSG00000029826	ProperStrand	20	chr4	131865855	131865978	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.6810
chr2	127953344	127953361	protein_coding-noncoding	Bcl2l11	utr5	ENSMUSG00000027381	NonProperStrand	17	chr16	23110840	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.8783
chr2	115440451	115440487	protein_coding	BC052040	intron	ENSMUSG00000040282	ProperStrand	20	chr4	131908809	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	9	-20.3042
chr5	122691914	122691930	protein_coding	Hvcn1	utr3	ENSMUSG00000064267	ProperStrand	182	chr17	39985195	39985253	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-3.8022
chr16	30574661	30581093	protein_coding	Lsg1	exon	ENSMUSG00000022538	ProperStrand	25	chr15	31395104	31397497	protein_coding	March6	exon	ENSMUSG00000039100	ProperStrand	94	2	-19.1088
chr2	179322378	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr15	76005537	76005553	protein_coding	Plec	exon	ENSMUSG00000022565	ProperStrand	186	1	-8.9451
chr11	72029099	72029115	lincRNA	4930563E22Rik	exon	ENSMUSG00000053574	NonProperStrand	3	chr18	33954816	33954941	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-9.7168
chr11	72520007	72520026	protein_coding	Ankfy1	intron	ENSMUSG00000020790	ProperStrand	68	chr4	140121137	140121153	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	1	-11.4185
chr17	47396026	47396116	protein_coding	Trerf1	intron	ENSMUSG00000064043	ProperStrand	56	chr16	23110913	23110998	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-1.6219
chr17	24857220	24858636	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr9	120038478	120038669	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	6	-5.0017
chr15	97966723	97966749	protein_coding	Asb8	exon	ENSMUSG00000048175	ProperStrand	6	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-9.5081
chr4	98600962	98601052	protein_coding	Usp1	exon	ENSMUSG00000028560	ProperStrand	11	chr5	121070766	121071712	protein_coding	Ddx54	exon	ENSMUSG00000029599	ProperStrand	104	2	-inf
chr15	76735408	76735446	protein_coding	Rpl8	exon	ENSMUSG00000003970	ProperStrand	191	chr12	110874221	110874290	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	1	-7.6644
chr10	128061642	128062312	protein_coding	Rps26	utr3	ENSMUSG00000025362	ProperStrand	67	chr2	130101259	130101311	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	8	-20.0210
chr9	108265191	108268190	protein_coding	Usp4	exon	ENSMUSG00000032612	ProperStrand	29	chr2	37255617	37255656	snoRNA	ENSMUSG00000077756_Snord90	.	ENSMUSG00000077756	ProperStrand	167	1	-12.7294
chr9	37458937	37462610	protein_coding	Tbrg1	exon	ENSMUSG00000011114	ProperStrand	56	chr16	23110491	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-4.5385
chr3	85942723	85942779	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	chr11	77995188	77995241	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	2	-4.8556
chr2	130370699	130377979	protein_coding	Ptpra	exon	ENSMUSG00000027303	ProperStrand	24	chr7	116664794	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	4	-13.8015
chrX	140770799	140781287	protein_coding-noncoding	Alg13	utr3	ENSMUSG00000041718	ProperStrand	87	chr4	131865855	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	11	-19.8167
chr9	70960076	70960093	protein_coding	Aqp9	exon	ENSMUSG00000032204	NonProperStrand	118	chr3	116599604	116599704	protein_coding	Frrs1	exon	ENSMUSG00000033386	ProperStrand	27	1	-13.5711
chr2	90235313	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	50681249	50681265	LTR	RLTR13D4	ERVK	chr4RLTR13D450681136	ProperStrand	1	1	-inf
chr2	30982094	30982111	protein_coding	Fnbp1	intron	ENSMUSG00000075415	ProperStrand	53	chr11	51551381	51551425	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	1	-7.9473
chr2	121261672	121261723	protein_coding	Pdia3	exon	ENSMUSG00000027248	ProperStrand	74	chr16	23109067	23109090	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	2	-11.0596
chr6	89283105	89283122	protein_coding	Plxna1	exon	ENSMUSG00000030084	NonProperStrand	19	chr11	62416951	62416969	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-8.3479
chr2	118749783	118749801	protein_coding	Bahd1	utr3	ENSMUSG00000040007	ProperStrand	10	chr10	23506278	23506350	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	3	-inf
chr8	125603796	125603876	protein_coding-noncoding	Spg7	utr5	ENSMUSG00000000738	ProperStrand	1	chr8	125603863	125603953	protein_coding	Spg7	exon	ENSMUSG00000000738	ProperStrand	40	1	-inf
chr4	108278918	108278934	protein_coding	Orc1	exon	ENSMUSG00000028587	ProperStrand	161	chr5	108336375	108336408	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-3.0388
chr2	70371162	70371180	antisense	1500002O10Rik	.	ENSMUSG00000087264	ProperStrand	3	chr17	24857750	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	3	-inf
chr5	37187771	37187818	protein_coding	Mrfap1	exon	ENSMUSG00000055302	ProperStrand	62	chr17	35299507	35299599	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-4.7141
chr8	46038233	46112197	protein_coding	Fat1	exon	ENSMUSG00000070047	ProperStrand	306	chr4	131908688	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	6	-1.1552
chr14	80262508	80262525	lincRNA	Gm6999	intron	ENSMUSG00000075495	ProperStrand	265	chr9	78327873	78328062	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	4	-11.5848
chr17	26258505	26258521	protein_coding	Tmem8	exon	ENSMUSG00000024180	NonProperStrand	3	chr14	76247763	76247792	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-10.4338
chr14	52796307	52796397	protein_coding	Supt16h	exon	ENSMUSG00000035726	ProperStrand	193	chr19	8800355	8800434	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-1.5562
chr2	29838777	29839180	protein_coding	Spna2	exon	ENSMUSG00000057738	ProperStrand	222	chr7	117190023	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-1.2054
chr1	130228405	130228495	protein_coding	Mcm6	utr3	ENSMUSG00000026355	ProperStrand	69	chr8	32260343	32260423	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-4.3628
chr1	84736114	84792366	protein_coding	Trip12	exon	ENSMUSG00000026219	ProperStrand	248	chr2	26493366	26493503	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	12	-19.6705
chr9	62992379	62992395	protein_coding	Skor1	exon	ENSMUSG00000022245	NonProperStrand	70	chr5	108336365	108336422	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-4.5844
chr13	75293971	75294062	LINE	L1Md_F	L1	chr13L1Md_F75290152	ProperStrand	1	chr11	11527612	11527692	protein_coding	4930512M02Rik	exon	ENSMUSG00000062511	NonProperStrand	1	1	-inf
chr12	110809714	110809804	lincRNA	Meg3	exon	ENSMUSG00000021268	ProperStrand	61	chr15	34370577	34370657	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-3.5187
chr7	52378398	52378459	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	chr5	108334230	108334330	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	5	-5.4926
chr4	64785559	64785575	protein_coding	Pappa	utr5	ENSMUSG00000028370	ProperStrand	65	chr5	23825941	23825957	protein_coding	Kcnh2	exon	ENSMUSG00000038319	ProperStrand	242	1	-10.3562
chr12	111930983	111931021	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-0.9185
chr12	110894556	110894623	snoRNA	ENSMUSG00000064417_SNORD113	.	ENSMUSG00000064417	ProperStrand	16	chr8	129468746	129468796	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-7.0247
chrX	72214248	72214264	protein_coding-noncoding	Gab3	utr3	ENSMUSG00000032750	ProperStrand	420	chr10	5990162	5990247	protein_coding	Akap12	utr3	ENSMUSG00000038587	ProperStrand	1008	1	-3.8921
chr13	19684241	19684257	protein_coding	Epdr1	utr3	ENSMUSG00000002808	ProperStrand	46	chr2	32881629	32881645	protein_coding	Garnl3	exon	ENSMUSG00000038860	NonProperStrand	54	1	-14.0644
chr2	158182180	158182280	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	chr3	96267933	96267954	tRNA	tRNA749-HisGTG	.	524635	ProperStrand	8	1	-9.0791
chr8	73926766	73928098	protein_coding	5430437P03Rik	exon	ENSMUSG00000031820	ProperStrand	11	chr9	15118520	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	1	-12.8067
chr15	58577335	58577351	protein_coding	Fer1l6	intron	ENSMUSG00000037106	ProperStrand	54	chr1	136501100	136501124	protein_coding	Kdm5b	utr5	ENSMUSG00000042207	ProperStrand	223	1	-10.8927
chr5	104304857	104304873	protein_coding	Klhl8	exon	ENSMUSG00000029312	NonProperStrand	1	chr10	90432659	90432676	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	1	-inf
chr4	146781529	146781545	lincRNA	Gm17317	intron	ENSMUSG00000091833	ProperStrand	8	chr9	78328120	78328210	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-10.4454
chr17	27700119	27700224	protein_coding	Hmga1	utr3	ENSMUSG00000046711	ProperStrand	180	chr8	73419657	73419682	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-1.3393
chr6	136780396	136783880	protein_coding	C030030A07Rik	utr5	ENSMUSG00000043298	ProperStrand	3	chr1	162965531	162965578	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-9.4650
chr5	135857995	135858011	protein_coding	Pom121	exon	ENSMUSG00000053293	NonProperStrand	94	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-4.9679
chr1	193176061	193176161	protein_coding	Ppp2r5a	utr3	ENSMUSG00000026626	ProperStrand	16	chr16	23110835	23110875	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-7.9620
chr16	90386835	90386853	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	chrX	40944841	40944857	protein_coding	Gm362	exon	ENSMUSG00000078320	ProperStrand	129	1	-10.6717
chr12	8748599	8748707	protein_coding	Pum2	intron	ENSMUSG00000020594	ProperStrand	39	chr18	35714250	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.2497
chr1	193543284	193543301	protein_coding	Lpgat1	exon	ENSMUSG00000026623	ProperStrand	31	chr8	98260189	98260279	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	1	-11.3234
chr9	4299361	4302546	protein_coding	Aasdhppt	exon	ENSMUSG00000025894	ProperStrand	121	chr19	8963076	8963166	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.2065
chr7	133835253	133835269	protein_coding	Slx1b	exon	ENSMUSG00000059772	ProperStrand	15	chr17	35089181	35089233	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-8.2628
chr4	116827118	116827187	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	chr11	62416951	62417019	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	3	-2.4617
chr10	62243261	62243351	protein_coding	Ccar1	exon	ENSMUSG00000020074	ProperStrand	13	chr10	110918551	110918631	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-6.4274
chr19	5719336	5719352	protein_coding	Ehbp1l1	exon	ENSMUSG00000024937	ProperStrand	75	chr19	60850251	60850365	snoRNA	ENSMUSG00000065167_Snora19	.	ENSMUSG00000065167	ProperStrand	10	1	-16.5507
chr5	144085939	144085955	protein_coding	Zdhhc4	exon	ENSMUSG00000001844	NonProperStrand	14	chr4	43505764	43505864	protein_coding	Ccdc107	intron	ENSMUSG00000028461	ProperStrand	69	1	-16.0409
chr6	143813837	143813853	protein_coding	Sox5	intron	ENSMUSG00000041540	NonProperStrand	49	chr19	8798484	8798524	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-5.6072
chr4	114741487	114741504	protein_coding	Tal1	utr3	ENSMUSG00000028717	NonProperStrand	69	chr9	15119634	15119734	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.3903
chr8	13416896	13416912	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr4	86232352	86232486	snoRNA	ENSMUSG00000088958_Scarna8	.	ENSMUSG00000088958	ProperStrand	366	2	-5.1957
chr4	151585630	151585668	protein_coding	Acot7	intron	ENSMUSG00000028937	ProperStrand	15	chr15	34370545	34370580	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-6.2440
chr1	72871522	72895720	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	chr4	3762227	3762293	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	1	-5.6980
chr1	88423324	88423391	protein_coding	Ptma	utr5	ENSMUSG00000026238	ProperStrand	385	chr7	117166797	117166857	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	3	-4.4699
chr8	117433779	117433876	protein_coding	Wwox	intron	ENSMUSG00000004637	ProperStrand	41	chr14	52852504	52852538	protein_coding	Chd8	exon	ENSMUSG00000053754	ProperStrand	167	1	-12.0284
chr18	60936146	60936172	protein_coding	Rps14	exon	ENSMUSG00000024608	ProperStrand	154	chr15	37971582	37971632	protein_coding	Ubr5	exon	ENSMUSG00000037487	ProperStrand	258	2	-13.5150
chr1	88254742	88254792	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chr7	4691731	4691753	protein_coding	Suv420h2	utr5	ENSMUSG00000059851	NonProperStrand	70	1	-7.0504
chr12	39012527	39012543	protein_coding	Dgkb	intron	ENSMUSG00000036095	ProperStrand	19	chr4	131865855	131865978	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.7782
chr13	36209855	36209871	protein_coding	Fars2	utr5	ENSMUSG00000021420	ProperStrand	19	chr2	146125208	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	1	-13.4012
chr5	144752396	144752416	protein_coding	Ccz1	exon	ENSMUSG00000029617	ProperStrand	10	chr18	35716762	35716788	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-5.5279
chr16	20500335	20501469	protein_coding	Eif2b5	exon	ENSMUSG00000003235	ProperStrand	38	chr12	110918201	110918221	snoRNA	ENSMUSG00000065749_AF357428	.	ENSMUSG00000065749	ProperStrand	218	1	-11.6478
chr2	40143591	40143626	SINE	PB1D9	Alu	chr2PB1D940143566	ProperStrand	1	chr18	33954815	33954905	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-inf
chr8	114193758	114193858	protein_coding	Zfp1	exon	ENSMUSG00000055835	NonProperStrand	2	chr1	159077828	159077887	protein_coding	Rasal2	exon	ENSMUSG00000070565	NonProperStrand	22	2	-inf
chr1	173165455	173166564	protein_coding	Ndufs2	exon	ENSMUSG00000013593	ProperStrand	32	chr17	35299508	35299598	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-6.0072
chr16	37384897	37384913	protein_coding	Stxbp5l	utr5	ENSMUSG00000022829	ProperStrand	332	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-5.5409
chr11	119307445	119307504	protein_coding	Rnf213	exon	ENSMUSG00000070327	ProperStrand	20	chr4	131865858	131865948	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-12.4569
chr12	41837453	41837470	protein_coding	Immp2l	exon	ENSMUSG00000056899	ProperStrand	21	chr8	32260372	32260425	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	NonProperStrand	14	1	-18.6590
chr5	17106124	17106140	protein_coding	Sema3c	intron	ENSMUSG00000028780	NonProperStrand	7	chr9	50816824	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	1	-16.2568
chr11	83216110	83216172	protein_coding	Ap2b1	utr3	ENSMUSG00000035152	ProperStrand	60	chr9	120038560	120038650	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-5.2501
chr16	91405676	91405692	protein_coding	Ifnar2	utr3	ENSMUSG00000022971	NonProperStrand	23	chr8	13416897	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-8.3759
chr9	89992230	89992719	protein_coding	Morf4l1	exon	ENSMUSG00000062270	ProperStrand	33	chr7	117189998	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.4547
chr9	72569139	72594999	protein_coding	Nedd4	exon	ENSMUSG00000032216	ProperStrand	308	chr1	89673519	89673724	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	3	-2.5833
chr1	154966095	154966122	protein_coding	Nmnat2	utr3	ENSMUSG00000042751	ProperStrand	39	chr7	52713357	52713457	protein_coding	Ftl1	utr3	ENSMUSG00000050708	ProperStrand	807	2	-14.2553
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-3.5971
chr11	51601686	51601720	protein_coding	Sar1b	exon	ENSMUSG00000020386	ProperStrand	8	chr14	31827477	31827545	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	3	-19.8979
chr15	93241204	93250720	protein_coding	Pphln1	exon	ENSMUSG00000036167	ProperStrand	20	chr4	131908357	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-8.3399
chr17	28033014	28033030	protein_coding	Uhrf1bp1	utr3	ENSMUSG00000039512	ProperStrand	79	chr2	26494717	26494827	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.6214
chr2	29652336	29652426	protein_coding	Coq4	utr3	ENSMUSG00000026798	ProperStrand	4	chr18	35742484	35744187	protein_coding	Matr3	exon	ENSMUSG00000037236	ProperStrand	90	1	-18.4102
chr11	6519810	6519889	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	chr2	130101986	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-0.8264
mmu-miR-3968	3	21	miRNA	mmu-miR-3968	.	mmu-miR-3968	ProperStrand	27	chr3	108357359	108357459	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-6.1017
chr3	96361950	96365378	protein_coding	Txnip	utr5	ENSMUSG00000038393	ProperStrand	172	chr16	23110874	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	13	-4.4283
chr19	3466528	3466563	protein_coding	Ppp6r3	exon	ENSMUSG00000024908	ProperStrand	63	chr10	23505152	23505235	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-5.2131
chr9	61762185	61762222	protein_coding	Rplp1	exon	ENSMUSG00000007892	ProperStrand	116	chr4	131908688	131908783	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-1.8468
chr10	61893332	61895075	protein_coding	Supv3l1	exon	ENSMUSG00000020079	ProperStrand	14	chr11	69483145	69483235	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	5	-inf
chr1	71689588	71689612	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr15	98350146	98350246	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	3	-1.7789
chr3	104580440	104580456	protein_coding	Fam19a3	utr5	ENSMUSG00000055865	NonProperStrand	11	chr16	23111690	23111826	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	NonProperStrand	47	1	-17.3307
chr5	31783922	31783939	protein_coding	Zfp512	utr3	ENSMUSG00000062761	ProperStrand	44	chr7	116664807	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	7	-inf
chr5	28684853	28684943	protein_coding	Rbm33	exon	ENSMUSG00000048271	ProperStrand	78	chr10	110918550	110918630	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-2.9743
chr17	36005177	36005194	protein_coding	Ppp1r18	exon	ENSMUSG00000034595	NonProperStrand	17	chr1	164635681	164635731	protein_coding	Prrc2c	exon	ENSMUSG00000040225	ProperStrand	413	1	-12.0102
chr15	103028710	103028810	protein_coding	Cbx5	utr3	ENSMUSG00000009575	ProperStrand	98	chr15	82963647	82963700	protein_coding	Poldip3	exon	ENSMUSG00000041815	ProperStrand	57	1	-12.4301
chr9	26440743	26440759	DNA	MER5A	MER1_type	chr9MER5A26440741	ProperStrand	108	chr1	102076758	102076790	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	1	-8.2591
chr11	50694554	50694606	protein_coding	Zfp454	intron	ENSMUSG00000048728	ProperStrand	1	chrX	34622906	34622927	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-inf
chr17	31668123	31668152	protein_coding	Ndufv3	exon	ENSMUSG00000024038	ProperStrand	9	chr9	15119719	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-10.3457
chr9	72466925	72466952	protein_coding	Rfx7	exon	ENSMUSG00000037674	ProperStrand	20	chr16	23110901	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.6223
chr4	131865339	131865419	lincRNA	Snhg12	intron	ENSMUSG00000086290	ProperStrand	178	chr5	108336379	108336469	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-2.8611
chr8	129468745	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	chr15	79908931	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	16	-4.9961
chr4	76614453	76614470	protein_coding	Ptprd	intron	ENSMUSG00000028399	ProperStrand	198	chr7	26122914	26122980	protein_coding	Megf8	exon	ENSMUSG00000045039	ProperStrand	100	1	-9.8929
chr3	151883134	151883183	protein_coding	Fubp1	exon	ENSMUSG00000028034	ProperStrand	56	chr4	132394418	132394462	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	3	-20.0143
chr5	77697089	77697106	protein_coding	Rest	exon	ENSMUSG00000029249	ProperStrand	136	chr16	23111777	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-0.7792
chr5	23151876	23151893	protein_coding	Srpk2	intron	ENSMUSG00000062604	NonProperStrand	38	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.5179
chr7	26181911	26202421	protein_coding	Lipe	intron	ENSMUSG00000003123	NonProperStrand	63	chr8	73419716	73419738	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.0427
chr18	10052129	10052153	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-3.3834
chr18	41356153	41356185	miRNA	Mir5097	dead	ENSMUSG00000093361	ProperStrand	221	chr8	108167430	108167498	protein_coding	Ctcf	utr5	ENSMUSG00000005698	ProperStrand	75	4	-inf
chr12	110881070	110888805	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr2	130101985	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	2	-2.4518
chr8	110104540	110104610	protein_coding	Psmd7	utr3	ENSMUSG00000039067	ProperStrand	36	chr16	23111758	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-4.8359
chr7	109012534	109016922	protein_coding	Folr1	utr5	ENSMUSG00000001827	ProperStrand	12	chr9	61850890	61850908	protein_coding	Paqr5	intron	ENSMUSG00000032278	ProperStrand	2	1	-inf
chr19	29847169	29847185	protein_coding	9930021J03Rik	intron	ENSMUSG00000046138	NonProperStrand	1	chr3	123210913	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-inf
chr9	96980780	96980870	protein_coding	Slc25a36	exon	ENSMUSG00000032449	ProperStrand	159	chr11	97642989	97643069	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.0041
chr4	131908230	131908269	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr9	64022856	64022918	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	4	-8.3350
chr17	38290747	38290764	LTR	MurERV4-int	ERVK	chr17MurERV4-int38290059	ProperStrand	21	chr16	23110909	23110999	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.5481
chr6	55409137	55409154	protein_coding	Adcyap1r1	intron	ENSMUSG00000029778	NonProperStrand	12	chr9	120038610	120038657	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-6.1449
chr7	151765212	151765228	antisense	Gm10574	.	ENSMUSG00000073778	ProperStrand	357	chr15	79908955	79909020	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	2	-3.9182
chr7	38261960	38262050	protein_coding	Zfp536	intron	ENSMUSG00000043456	ProperStrand	57	chr14	33005156	33005236	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	2	-6.8653
chr18	32405206	32405222	protein_coding	Ercc3	exon	ENSMUSG00000024382	ProperStrand	280	chr11	62416602	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-2.3379
chr1	136652368	136652384	protein_coding	Ppp1r12b	utr3	ENSMUSG00000073557	NonProperStrand	12	chr9	120038467	120038518	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-6.1449
chr8	71992242	71992259	LINE	L1VL1	L1	chr8L1VL171989611	ProperStrand	1	chr3	123210938	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-inf
chr1	173341933	173341949	protein_coding	Usf1	utr5	ENSMUSG00000026641	NonProperStrand	144	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.7885
chr2	172837737	172837754	protein_coding	Rae1	exon	ENSMUSG00000027509	NonProperStrand	44	chr16	20692567	20692612	protein_coding	Eif4g1	utr3	ENSMUSG00000045983	ProperStrand	199	1	-11.5338
chr7	140162944	140164375	protein_coding	Zranb1	exon	ENSMUSG00000030967	ProperStrand	13	chr19	8799832	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-8.0039
chr2	116688877	116688895	antisense	Gm13990	.	ENSMUSG00000086462	ProperStrand	2	chr8	73419876	73419916	protein_coding	Rpl18a	exon	ENSMUSG00000045128	ProperStrand	394	1	-17.0863
chr17	64402485	64402575	protein_coding	Fer	intron	ENSMUSG00000000127	ProperStrand	10	chr10	23505154	23505279	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-7.3782
chr18	65784302	65823265	protein_coding	Zfp532	intron	ENSMUSG00000042439	ProperStrand	24	chr16	23110902	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-5.9609
chr1	29025575	29025592	LTR	RLTR18	ERVK	chr1RLTR1829025400	ProperStrand	6	chr11	102294590	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	1	-13.6547
chr4	34582258	34582280	protein_coding	Rars2	intron	ENSMUSG00000028292	ProperStrand	9	chr9	120037971	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	3	-18.3259
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr10	106825141	106825157	protein_coding	Lin7a	intron	ENSMUSG00000019906	NonProperStrand	13	1	-8.9859
chr11	5180669	5180685	protein_coding	Znrf3	utr3	ENSMUSG00000041961	NonProperStrand	210	chr1	162966819	162966863	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-3.8462
chr4	149026816	149026832	protein_coding	Pik3cd	exon	ENSMUSG00000039936	ProperStrand	151	chr4	116827120	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-5.2272
chr10	120848787	120849632	protein_coding	Rassf3	utr3	ENSMUSG00000025795	ProperStrand	26	chr11	97642952	97643070	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	4	-13.1598
chr11	87614626	87614643	antisense	Gm11505	.	ENSMUSG00000085872	ProperStrand	37	chr14	52634377	52634396	protein_coding	Zfp219	intron	ENSMUSG00000049295	NonProperStrand	3	1	-21.0941
chr18	36902180	36902205	protein_coding	Ndufa2	utr3	ENSMUSG00000014294	ProperStrand	4	chr19	45721456	45721477	protein_coding	Fbxw4	intron	ENSMUSG00000040913	NonProperStrand	6	1	-19.4007
chr2	24915691	24915707	protein_coding	Nelf	exon	ENSMUSG00000006476	ProperStrand	40	chr7	107987741	107987796	protein_coding	Fam168a	utr3	ENSMUSG00000029461	ProperStrand	14	1	-17.2338
chr4	149615237	149616234	protein_coding	Eno1	exon	ENSMUSG00000063524	ProperStrand	432	chr2	130102004	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	3	-5.0302
chr11	98113259	98113359	protein_coding	Cdk12	intron	ENSMUSG00000003119	ProperStrand	50	chr19	44188368	44188441	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	1	-8.1600
chrX	84536204	84536223	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	ProperStrand	18	chr7	116663710	116663760	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-7.9214
chr7	30231465	30231589	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	chr17	23807043	23807069	protein_coding	Thoc6	exon	ENSMUSG00000041319	ProperStrand	16	1	-11.5292
chr4	131908897	131908915	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr9	57385425	57385441	protein_coding	2310046O06Rik	utr5	ENSMUSG00000032305	ProperStrand	135	1	-5.6599
chr1	191058376	191058393	protein_coding	Kcnk2	intron	ENSMUSG00000037624	ProperStrand	56	chr17	25996060	25996076	protein_coding	Wdr90	exon	ENSMUSG00000073434	ProperStrand	91	1	-12.6152
chr10	127521070	127521099	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr11	118130313	118130349	protein_coding	Usp36	exon	ENSMUSG00000033909	ProperStrand	27	1	-10.2774
chr8	125626653	125626803	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	chr3	68889156	68889244	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-1.0979
chr6	119894233	119894254	protein_coding	Wnk1	intron	ENSMUSG00000045962	ProperStrand	221	chr8	73419656	73419786	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-1.0643
chr10	5987255	5987364	protein_coding	Akap12	utr3	ENSMUSG00000038587	ProperStrand	1008	chr17	23806214	23806244	protein_coding	Thoc6	exon	ENSMUSG00000041319	ProperStrand	16	1	-10.3517
chr8	74008400	74008417	protein_coding	Ano8	exon	ENSMUSG00000034863	NonProperStrand	171	chr9	15119968	15120040	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	3	-12.1495
chr11	101320504	101320526	protein_coding	Vat1	utr3	ENSMUSG00000034993	ProperStrand	69	chr1	9932549	9932606	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	2	-11.9424
chr3	108153147	108153247	protein_coding	Sort1	intron	ENSMUSG00000068747	ProperStrand	32	chr16	23111761	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	6	-16.5316
chr18	15220719	15220740	protein_coding	Kctd1	exon	ENSMUSG00000036225	ProperStrand	16	chr12	60141340	60141430	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	2	-15.0969
chr11	94853508	94853525	protein_coding	Ppp1r9b	exon	ENSMUSG00000038976	ProperStrand	27	chr16	23110940	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.1875
chr1	173269002	173270359	protein_coding	Dedd	exon	ENSMUSG00000013973	ProperStrand	17	chr1	134465558	134465574	protein_coding	Nfasc	utr3	ENSMUSG00000026442	NonProperStrand	48	1	-16.3137
chr11	3135637	3136245	protein_coding	Eif4enif1	exon	ENSMUSG00000020454	ProperStrand	575	chr2	70927900	70927917	protein_coding	Dcaf17	exon	ENSMUSG00000041966	NonProperStrand	89	1	-8.0021
chr11	68802176	68803587	protein_coding	Pfas	exon	ENSMUSG00000020899	ProperStrand	53	chr11	97642952	97642970	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.6858
chr17	46822266	46822337	protein_coding	Ppp2r5d	exon	ENSMUSG00000059409	ProperStrand	97	chr5	130300460	130300550	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.7268
chr16	36722563	36722646	protein_coding	Ildr1	exon	ENSMUSG00000022900	ProperStrand	17	chr11	117157864	117157881	protein_coding	Sept9	intron	ENSMUSG00000059248	ProperStrand	60	1	-15.8986
chr11	96635806	96638294	protein_coding	Snx11	utr5	ENSMUSG00000020876	NonProperStrand	24	chr15	89185015	89185084	protein_coding	Lmf2	exon	ENSMUSG00000022614	ProperStrand	19	1	-17.3644
chr2	168575866	168575884	protein_coding	Sall4	exon	ENSMUSG00000027547	ProperStrand	82	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-6.3644
chr8	82181895	82181967	protein_coding	Otud4	intron	ENSMUSG00000036990	ProperStrand	45	chr4	131866629	131866673	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	1	-9.6836
chr4	3831962	3831982	protein_coding	Plag1	exon	ENSMUSG00000003282	NonProperStrand	3	chr11	6520365	6520404	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	NonProperStrand	6	1	-inf
chr9	15119967	15119995	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	chr1	162966854	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-0.9623
chr1	138052750	138052840	protein_coding	Kif21b	exon	ENSMUSG00000041642	ProperStrand	77	chr15	79908932	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-4.9878
chr19	60845918	60847013	protein_coding	Eif3a	exon	ENSMUSG00000024991	ProperStrand	287	chr6	140602524	140602551	protein_coding	Aebp2	utr3	ENSMUSG00000030232	ProperStrand	34	11	-19.8539
chr17	34808913	34808930	protein_coding	Tnxb	exon	ENSMUSG00000033327	ProperStrand	36	chr7	116663633	116663694	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.4225
chr11	6213846	6213882	protein_coding	Ogdh	exon	ENSMUSG00000020456	ProperStrand	42	chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	1	-9.7825
chr2	164526290	164526307	protein_coding	Spint4	exon	ENSMUSG00000017310	ProperStrand	21	chr8	13416895	13416912	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-8.5609
chr3	99003134	99003163	protein_coding	Wars2	intron	ENSMUSG00000004233	NonProperStrand	48	chr14	55476645	55476661	protein_coding	Homez	exon	ENSMUSG00000057156	NonProperStrand	127	1	-12.2586
chr19	44188368	44188457	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr8	35037825	35037886	protein_coding	Rbpms	intron	ENSMUSG00000031586	ProperStrand	58	1	-7.8629
chr12	114290175	114290191	protein_coding	Pacs2	intron	ENSMUSG00000021143	NonProperStrand	302	chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	2	-7.5821
chr9	95768645	95768687	protein_coding	Atr	intron	ENSMUSG00000032409	ProperStrand	44	chr4	131908687	131908776	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.6723
chr1	66521957	66521973	protein_coding	Unc80	intron	ENSMUSG00000055567	NonProperStrand	212	chr9	64022855	64022911	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	2	-9.0367
chr4	43505718	43505808	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr17	34249164	34249205	protein_coding	Brd2	utr3	ENSMUSG00000024335	ProperStrand	69	6	-15.6742
chr18	35097568	35097618	protein_coding	Hspa9	utr3	ENSMUSG00000024359	ProperStrand	166	chr3	27375192	27375209	protein_coding	Fndc3b	intron	ENSMUSG00000039286	NonProperStrand	14	2	-inf
chrX	72632493	72632547	protein_coding	Fundc2	exon	ENSMUSG00000031198	ProperStrand	16	chr1	89673656	89673758	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	2	-9.5411
chr16	20288000	20293440	protein_coding	Parl	exon	ENSMUSG00000033918	ProperStrand	19	chrX	166427094	166427116	protein_coding	Mid1	exon	ENSMUSG00000035299	ProperStrand	209	1	-13.1429
chr5	65781682	65781762	protein_coding-noncoding	Rpl9	utr3	ENSMUSG00000047215	ProperStrand	2	chr9	120039590	120039680	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-10.6072
chr11	3092537	3092572	protein_coding	Sfi1	intron	ENSMUSG00000023764	ProperStrand	17	chr3	95564751	95564819	protein_coding	Rprd2	utr3	ENSMUSG00000028106	ProperStrand	12	1	-19.1709
chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	chr2	130101985	130102056	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-1.8264
chr13	101425003	101425068	protein_coding	Taf9	utr5	ENSMUSG00000078941	ProperStrand	15	chr5	130300449	130300549	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	7	-inf
chr1	34636398	34636415	protein_coding	1700101I19Rik	exon	ENSMUSG00000045815	ProperStrand	3	chr11	106362304	106362327	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-12.1736
chr5	76050696	76050753	protein_coding	Kit	utr3	ENSMUSG00000005672	ProperStrand	58	chr7	28146782	28146798	protein_coding	Spnb4	exon	ENSMUSG00000011751	NonProperStrand	84	2	-21.3335
chr2	164776206	164776223	protein_coding-noncoding	Mmp9	utr5	ENSMUSG00000017737	NonProperStrand	9	chr7	117166746	117166853	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-8.6357
chr6	127059528	127059545	protein_coding	9630033F20Rik	utr5	ENSMUSG00000038028	ProperStrand	10	chr7	150717379	150717426	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-9.1270
chr12	71087823	71087856	protein_coding	Sav1	utr5	ENSMUSG00000021067	ProperStrand	1	chr4	131908266	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-inf
chr11	59299092	59299117	protein_coding	Zkscan17	utr3	ENSMUSG00000020472	ProperStrand	23	chr12	60141351	60141441	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-8.7551
chr7	52140541	52140579	protein_coding	Med25	exon	ENSMUSG00000002968	ProperStrand	33	chr9	57385425	57385441	protein_coding	2310046O06Rik	utr5	ENSMUSG00000032305	ProperStrand	135	1	-12.8926
chr17	45706585	45708387	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr9	15119639	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	17	-2.8135
chr2	35478899	35478916	protein_coding	Dab2ip	intron	ENSMUSG00000026883	NonProperStrand	58	chr4	131865855	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.8207
chr1	192001834	192001851	antisense	Gm17566	.	ENSMUSG00000079045	ProperStrand	15	chr17	75709496	75709537	protein_coding	Ltbp1	exon	ENSMUSG00000001870	ProperStrand	136	1	-14.4926
chr14	22321508	22321564	protein_coding	Myst4	intron	ENSMUSG00000021767	ProperStrand	151	chr17	24857740	24857830	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-0.9397
chr4	55021597	55021687	protein_coding	Zfp462	exon	ENSMUSG00000060206	ProperStrand	37	chr11	68886933	68887013	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-5.0731
chr9	21078104	21078139	protein_coding	Atg4d	utr3	ENSMUSG00000002820	ProperStrand	9	chr16	23111375	23111465	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-11.4045
chr1	72896275	72898620	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	chr11	67167096	67167112	protein_coding	Myh13	exon	ENSMUSG00000060180	ProperStrand	145	1	-7.7210
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr11	6519810	6519944	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	5	-4.5023
chr9	44657413	44657513	protein_coding	Mll1	exon	ENSMUSG00000002028	ProperStrand	151	chr17	35088957	35088995	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	3	-9.8954
chr5	92482069	92482085	lincRNA	Gm9793	intron	ENSMUSG00000092011	ProperStrand	3	chr17	66698493	66698584	protein_coding	1110012J17Rik	intron	ENSMUSG00000052105	ProperStrand	60	1	-21.0062
chr5	136265541	136265591	protein_coding	Mdh2	exon	ENSMUSG00000019179	ProperStrand	50	chr4	126512928	126513879	protein_coding	AU040320	exon	ENSMUSG00000028830	NonProperStrand	12	2	-20.5640
chr16	23110828	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	chr7	67125755	67125837	snoRNA	ENSMUSG00000089375_Snord107	.	ENSMUSG00000089375	ProperStrand	451	24	-2.4960
chr4	124736326	124736344	protein_coding	Dnali1	exon	ENSMUSG00000042707	ProperStrand	45	chr1	162966189	162966252	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-8.1516
mmu-miR-2137	0	20	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	chr1	39605605	39605695	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-5.6171
chr17	35383930	35383950	protein_coding	Ddx39b	exon	ENSMUSG00000019432	ProperStrand	119	chr4	58888442	58889975	protein_coding	AI314180	exon	ENSMUSG00000050812	ProperStrand	19	1	-14.2704
chr2	25821196	25821219	protein_coding	Camsap1	exon	ENSMUSG00000026933	ProperStrand	27	chr2	41199972	41199989	protein_coding	Lrp1b	exon	ENSMUSG00000049252	ProperStrand	376	1	-11.2508
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr11	98878344	98878467	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	6	-9.4534
chr19	10703935	10704025	protein_coding	Ddb1	utr3	ENSMUSG00000024740	ProperStrand	304	chr7	51505507	51505587	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	1	-5.5692
chr3	108187818	108187835	protein_coding	Psrc1	utr5	ENSMUSG00000068744	NonProperStrand	12	chr16	23110966	23110999	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-4.4633
chr7	129364056	129364181	protein_coding	2010110P09Rik	exon	ENSMUSG00000030865	NonProperStrand	26	chr16	23110828	23110872	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.2392
chr2	91436664	91460399	protein_coding	Ckap5	utr3	ENSMUSG00000040549	ProperStrand	53	chr10	23505151	23505204	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-4.2032
chr13	38615258	38615297	protein_coding	Txndc5	utr5	ENSMUSG00000038991	ProperStrand	48	chr2	121277246	121277279	protein_coding	Serf2	utr3	ENSMUSG00000074884	ProperStrand	22	1	-15.7798
chr6	14622083	14622163	LINE	L1Md_F	L1	chr6L1Md_F14622082	NonProperStrand	1	chr6	14621901	14621991	LTR	RLTR13B2	ERVK	chr6RLTR13B214621248	NonProperStrand	1	1	-inf
chr7	150155018	150155034	protein_coding	Ascl2	utr5	ENSMUSG00000009248	ProperStrand	1	chr12	112779228	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-inf
chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr11	87172190	87172206	protein_coding	Ppm1e	exon	ENSMUSG00000046442	ProperStrand	112	1	-5.2311
chr13	59694460	59694504	protein_coding	Naa35	intron	ENSMUSG00000021555	ProperStrand	20	chr10	23505152	23505215	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.0137
chr10	121584336	121584354	LTR	MER67C	ERV1	chr10MER67C121584018	NonProperStrand	1	chr2	23012220	23015780	protein_coding	Yme1l1	exon	ENSMUSG00000026775	ProperStrand	20	1	-inf
chr13	43575865	43575897	protein_coding	Ranbp9	exon	ENSMUSG00000038546	ProperStrand	39	chr7	118219574	118219679	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	4	-15.6372
chr3	96073028	96073063	protein_coding	Hist2h3b	utr3	ENSMUSG00000074403	ProperStrand	4	chr16	23111464	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-6.3168
chr10	126457921	126457937	protein_coding	Tsfm	intron	ENSMUSG00000040521	ProperStrand	7	chr11	97642952	97643071	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-6.6269
chr5	129528925	129528995	protein_coding	Ran	utr3	ENSMUSG00000029430	ProperStrand	82	chr3	123210853	123210971	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	9	-18.0324
chr15	78723004	78723620	protein_coding	Gga1	exon	ENSMUSG00000033128	ProperStrand	15	chr5	108336407	108336487	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-7.6413
mmu-miR-6240	3	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr4	154533626	154533812	protein_coding	Ski	exon	ENSMUSG00000029050	ProperStrand	28	1	-7.4204
chr14	51460950	51460966	protein_coding	Tep1	exon	ENSMUSG00000006281	ProperStrand	37	chr15	79908958	79909019	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-6.4258
chr4	116283805	116283881	protein_coding	Nasp	exon	ENSMUSG00000028693	ProperStrand	64	chr1	162967515	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-3.3562
chr16	37384897	37384913	protein_coding	Stxbp5l	utr5	ENSMUSG00000022829	ProperStrand	332	chr8	26937728	26937768	protein_coding	Ash2l	exon	ENSMUSG00000031575	ProperStrand	113	1	-8.6174
chr18	10052129	10052153	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr1	169777993	169778011	protein_coding	Lmx1a	utr3	ENSMUSG00000026686	NonProperStrand	7	1	-13.2261
chr7	19722633	19722649	protein_coding	Fbxo46	utr3	ENSMUSG00000050428	NonProperStrand	24	chr17	24857740	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	3	-9.7458
chr17	26230654	26230730	protein_coding-noncoding	Nme4	utr3	ENSMUSG00000024177	ProperStrand	1	chr1	132742959	132742975	protein_coding	Pigr	exon	ENSMUSG00000026417	NonProperStrand	48	1	-inf
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chrX	7752870	7752886	protein_coding	Tbc1d25	exon	ENSMUSG00000039201	ProperStrand	126	2	-7.4243
chr2	60739606	60739622	protein_coding	Rbms1	intron	ENSMUSG00000026970	NonProperStrand	5	chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-11.5949
chr7	28688069	28688149	LTR	MTC	MaLR	chr7MTC28687996	NonProperStrand	1	chr7	28687858	28687948	LTR	RLTR33	ERVK	chr7RLTR3328687343	NonProperStrand	1	1	-inf
chr2	144087321	144087418	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	chr18	33954850	33954947	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	8	-0.8903
chr9	21214807	21214866	lincRNA	Gm16853	intron	ENSMUSG00000086062	NonProperStrand	6	chr6	115757989	115758041	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	6	-inf
chr1	173275854	173275885	protein_coding	Pfdn2	exon	ENSMUSG00000006412	ProperStrand	9	chr8	129468746	129468833	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	4	-19.9653
chr10	79592788	79593032	protein_coding	Stk11	utr3	ENSMUSG00000003068	ProperStrand	24	chr11	77996560	77996606	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-7.9227
chr6	91706236	91706276	protein_coding	Slc6a6	utr3	ENSMUSG00000030096	ProperStrand	206	chr12	60235136	60235180	snoRNA	ENSMUSG00000077505_SNORA26	.	ENSMUSG00000077505	ProperStrand	82	1	-10.2115
chr2	11395530	11395655	protein_coding	Pfkfb3	utr3	ENSMUSG00000026773	ProperStrand	27	chr4	152856778	152856794	protein_coding	Ajap1	utr5	ENSMUSG00000039546	ProperStrand	51	1	-15.2683
chr7	26181911	26202421	protein_coding	Lipe	intron	ENSMUSG00000003123	NonProperStrand	63	chr11	62416601	62416656	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-5.0716
chr1	7053113	7053130	LTR	RLTR44-int	ERVK	chr1RLTR44-int7051862	ProperStrand	12	chr11	97490513	97490563	protein_coding	E130012A19Rik	exon	ENSMUSG00000043439	ProperStrand	83	1	-15.9315
chr16	20198844	20198874	protein_coding	Yeats2	intron	ENSMUSG00000041215	ProperStrand	21	chr16	23110914	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.5481
chr7	51746064	51746164	protein_coding	2310044H10Rik	utr3	ENSMUSG00000008140	ProperStrand	14	chr18	35716811	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.8493
chr2	92227305	92229158	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	5	-9.7499
chr10	126745618	126745667	protein_coding	Mars	exon	ENSMUSG00000040354	ProperStrand	38	chr4	45126511	45126532	protein_coding	Gm10982	intron	ENSMUSG00000078712	ProperStrand	1	1	-inf
chr8	89993786	89993833	protein_coding	Cbln1	utr3	ENSMUSG00000031654	ProperStrand	8	chr18	35716764	35716854	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	6	-20.4715
chr4	24555748	24555765	protein_coding	Klhl32	intron	ENSMUSG00000040387	ProperStrand	67	chr2	26494708	26494741	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.9099
chr5	44390167	44398331	protein_coding	Prom1	exon	ENSMUSG00000029086	ProperStrand	12	chr16	23110843	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-4.4633
chr11	21895251	21895267	protein_coding	Otx1	utr3	ENSMUSG00000005917	ProperStrand	5	chr2	26493435	26493500	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-8.7753
chr13	9833566	9833683	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr10	60896163	60896191	protein_coding	Eif4ebp2	utr3	ENSMUSG00000020091	ProperStrand	39	2	-9.4658
chr18	10052132	10052153	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr5	135857995	135858011	protein_coding	Pom121	exon	ENSMUSG00000053293	NonProperStrand	94	1	-7.9035
chrX	50930506	50930596	LTR	RLTR15	ERVK	chrXRLTR1550930516	ProperStrand	1	chrX	50934458	50934538	LTR	RLTR21	ERVK	chrXRLTR2150934416	NonProperStrand	1	1	-inf
chr18	20629563	20629580	protein_coding	Dsg4	exon	ENSMUSG00000001804	NonProperStrand	13	chr1	89673621	89673711	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	7	-inf
chr2	103606810	103619387	protein_coding	Caprin1	exon	ENSMUSG00000027184	ProperStrand	145	chr4	131908236	131908345	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	5	-3.5983
chr18	67796837	67796887	protein_coding	Cep76	exon	ENSMUSG00000073542	ProperStrand	6	chr9	15119639	15119713	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	5	-19.1954
chr5	135635277	135635293	protein_coding	Tbl2	exon	ENSMUSG00000005374	NonProperStrand	4	chr15	79908951	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-11.1005
chr1	120733788	120733836	protein_coding	Gli2	exon	ENSMUSG00000048402	ProperStrand	148	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-6.3669
chr14	119008849	119008868	protein_coding	Abcc4	intron	ENSMUSG00000032849	NonProperStrand	24	chr19	8798484	8798513	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-7.0265
chr2	127953344	127953360	protein_coding-noncoding	Bcl2l11	utr5	ENSMUSG00000027381	NonProperStrand	17	chr4	137212294	137212310	protein_coding	Usp48	utr3	ENSMUSG00000043411	ProperStrand	135	1	-14.2512
chr14	79980170	79980186	protein_coding	Elf1	exon	ENSMUSG00000036461	NonProperStrand	17	chr2	26493391	26493500	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-6.1967
chr6	120467088	120468467	protein_coding	Cecr5	exon	ENSMUSG00000058979	ProperStrand	97	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-2.1198
chr8	112350537	112350606	protein_coding	Ap1g1	exon	ENSMUSG00000031731	ProperStrand	22	chr2	144087356	144087446	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	2	-13.6554
chr15	47527246	47527263	protein_coding	Csmd3	exon	ENSMUSG00000022311	NonProperStrand	25	chr8	114520378	114520456	protein_coding	Kars	exon	ENSMUSG00000031948	ProperStrand	89	1	-14.2999
chr4	40209061	40209151	protein_coding	Topors	exon	ENSMUSG00000036822	ProperStrand	40	chr7	51505823	51505903	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	2	-14.9346
chr13	119158881	119158935	LINE	Lx8	L1	chr13Lx8119157759	NonProperStrand	2	chr14	76247711	76247753	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-inf
chr8	113348092	113348182	protein_coding	Sf3b3	exon	ENSMUSG00000033732	ProperStrand	181	chr19	8963096	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-0.7173
chr16	35048334	35048434	protein_coding	Ptplb	intron	ENSMUSG00000035376	ProperStrand	17	chr11	77995191	77995239	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-8.7173
chr5	140408327	140408344	protein_coding	Elfn1	intron	ENSMUSG00000048988	ProperStrand	12	chr12	106269470	106269557	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-7.3282
chr4	107145497	107145517	protein_coding	Glis1	intron	ENSMUSG00000034762	ProperStrand	14	chr16	23110957	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.2008
chr15	72937128	72937216	protein_coding	Eif2c2	utr3	ENSMUSG00000036698	ProperStrand	154	chr1	162967537	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-1.8536
chr8	73033199	73033256	protein_coding	2810422J05Rik	exon	ENSMUSG00000055553	ProperStrand	171	chr1	88247742	88247764	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-3.1315
chr16	36071984	36072000	protein_coding	Ccdc58	utr5	ENSMUSG00000075229	NonProperStrand	55	chr7	16524110	16524136	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	1	-9.8932
chr2	65376282	65376298	protein_coding	Scn3a	intron	ENSMUSG00000057182	ProperStrand	26	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.8576
chr4	91012543	91012564	protein_coding	Elavl2	intron	ENSMUSG00000008489	ProperStrand	52	chr18	60936599	60936621	protein_coding	Rps14	exon	ENSMUSG00000024608	ProperStrand	154	1	-11.7101
chr7	29162882	29162954	protein_coding	Zfp36	exon	ENSMUSG00000044786	NonProperStrand	3	chr19	8800427	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-16.2874
chr15	34012632	34012732	protein_coding	Mtdh	utr5	ENSMUSG00000022255	ProperStrand	37	chr7	116663713	116663767	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	6	-17.9993
chr15	98356816	98356836	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	chr12	106269284	106269364	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	3	-0.9865
chr9	116875139	116875158	protein_coding	Rbms3	intron	ENSMUSG00000039607	NonProperStrand	54	chr17	24857781	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.4751
chr11	55046045	55046062	protein_coding	Slc36a1	exon	ENSMUSG00000020261	ProperStrand	11	chr5	116010845	116010945	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	1	-13.6144
chr11	94269827	94269844	protein_coding	Cacna1g	utr3	ENSMUSG00000020866	NonProperStrand	5	chr11	68886928	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	3	-19.3288
chr7	152047361	152047381	protein_coding	Fgf4	utr5	ENSMUSG00000050917	ProperStrand	66	chr5	130295428	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	2	-8.3410
chr15	94374177	94374193	protein_coding	Irak4	utr5	ENSMUSG00000059883	NonProperStrand	1	chr2	158182201	158182279	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-inf
chr5	140299866	140299964	protein_coding	Psmg3	utr3	ENSMUSG00000029551	ProperStrand	5	chr5	121655035	121655088	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-8.7807
chr5	35368612	35368989	protein_coding	Rgs12	exon	ENSMUSG00000029101	ProperStrand	13	chr11	77996558	77996603	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-9.1780
mmu-miR-6240	1	23	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr19	8798740	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	11	-4.4182
chr1	152268927	152269668	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	chr18	73693169	73693187	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-1.5845
chr4	116358589	116358607	protein_coding	Prdx1	utr5	ENSMUSG00000028691	ProperStrand	41	chr1	37921883	37921901	protein_coding	Tsga10	utr5	ENSMUSG00000060771	ProperStrand	79	1	-13.5321
chr9	62641901	62644637	protein_coding	Fem1b	exon	ENSMUSG00000032244	ProperStrand	111	chr18	35716752	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-5.3833
chr12	36845630	36847310	protein_coding	Bzw2	exon	ENSMUSG00000020547	ProperStrand	29	chr1	63225668	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	3	-18.2618
chr4	140121138	140121154	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	chr15	5068428	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	2	-7.4438
chr14	26313308	26313325	protein_coding	Zmiz1	intron	ENSMUSG00000007817	ProperStrand	34	chr11	55296194	55296334	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	4	-19.3026
chr3	146637410	146637426	protein_coding	Ttll7	intron	ENSMUSG00000036745	NonProperStrand	16	chr7	117189864	117189922	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-8.8687
chr16	17891616	17891680	protein_coding	Dgcr2	utr5	ENSMUSG00000003166	ProperStrand	45	chr17	46446998	46447088	protein_coding	Abcc10	exon	ENSMUSG00000032842	ProperStrand	20	2	-19.8171
chr9	44586693	44586711	protein_coding	Ift46	exon	ENSMUSG00000002031	ProperStrand	28	chr19	8963027	8963083	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.6314
chr10	12902322	12902670	protein_coding	Ltv1	exon	ENSMUSG00000019814	ProperStrand	76	chr1	63225072	63225109	protein_coding	Eef1b2	exon	ENSMUSG00000025967	ProperStrand	106	1	-11.6948
chr1	88249813	88250360	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chr11	62416985	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	5	-5.7442
chr17	34089205	34089367	protein_coding	Rps18	exon	ENSMUSG00000008668	ProperStrand	111	chr2	130109497	130109513	protein_coding	Idh3b	exon	ENSMUSG00000027406	ProperStrand	146	1	-10.2930
chr5	92485080	92485184	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	chr5	130300438	130300540	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	8	-3.0656
chr6	83111671	83111687	protein_coding	1700003E16Rik	exon	ENSMUSG00000030030	ProperStrand	352	chr12	110887828	110887873	snoRNA	ENSMUSG00000084549_SNORD113	.	ENSMUSG00000084549	ProperStrand	196	1	-7.4057
chr16	87478121	87478208	protein_coding	Usp16	intron	ENSMUSG00000025616	ProperStrand	3	chr18	73693164	73693187	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-11.8459
chr12	70269863	70269879	protein_coding	Lrr1	exon	ENSMUSG00000034883	ProperStrand	26	chr4	34978278	34978295	protein_coding	Mob3b	intron	ENSMUSG00000073910	NonProperStrand	7	1	-22.6056
chr7	19981324	19981382	protein_coding-noncoding	Klc3	utr3	ENSMUSG00000040714	ProperStrand	1	chr18	33954858	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-inf
chr8	115070042	115070058	LTR	RMER17B	ERVK	chr8RMER17B115069960	NonProperStrand	1	chr14	33005134	33005224	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-inf
chr6	140769250	140769340	DNA	MMAR1	Mariner	chr6MMAR1140769052	NonProperStrand	1	chr6	140769369	140769449	LTR	ORR1B1	MaLR	chr6ORR1B1140769362	ProperStrand	1	1	-inf
chr5	86487684	86487745	protein_coding	Cenpc1	intron	ENSMUSG00000029253	ProperStrand	9	chr8	73419657	73419757	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	6	-19.9996
chr11	96679056	96679156	protein_coding	Nfe2l1	utr3	ENSMUSG00000038615	ProperStrand	118	chr15	57978228	57978264	snoRNA	ENSMUSG00000080461_SNORA11	.	ENSMUSG00000080461	ProperStrand	171	4	-19.7598
chr13	23855636	23855726	protein_coding	Hist1h1a	exon	ENSMUSG00000049539	ProperStrand	34	chr14	76247710	76247790	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-5.2673
chr10	5992345	5992445	protein_coding	Akap12	exon	ENSMUSG00000038587	ProperStrand	1008	chr1	9932550	9932607	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-2.3813
chr12	73786656	73786736	LTR	ETnERV2-int	ERVK	chr12ETnERV2-int73786349	NonProperStrand	1	chr12	73462462	73462552	protein_coding	Rtn1	intron	ENSMUSG00000021087	ProperStrand	13	1	-inf
chr7	24779190	24779213	SINE	ID_B1	B4	chr7ID_B124779183	NonProperStrand	54	chr2	73200537	73200553	protein_coding	Gpr155	exon	ENSMUSG00000041762	ProperStrand	33	1	-14.7304
chr11	98855573	98855673	protein_coding	Top2a	exon	ENSMUSG00000020914	ProperStrand	324	chr5	74489606	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	19	-25.6739
chr6	87603858	87608498	protein_coding	Aplf	exon	ENSMUSG00000030051	ProperStrand	7	chr2	169946077	169946138	protein_coding	Zfp217	utr5	ENSMUSG00000052056	ProperStrand	79	1	-17.1609
chr15	99077434	99077450	protein_coding	Mcrs1	exon	ENSMUSG00000037570	ProperStrand	46	chr9	15118246	15118314	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	5	-16.4796
chr5	151464487	151464538	protein_coding	N4bp2l2	exon	ENSMUSG00000029655	ProperStrand	10	chr9	65507697	65507722	protein_coding	Rbpms2	utr3	ENSMUSG00000032387	ProperStrand	85	2	-20.1287
chr1	162966248	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	chr4	56910496	56910618	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	6	-8.2305
chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	chr8	129468784	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-0.8603
chr9	40612838	40612878	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	chr5	74489570	74489670	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-0.7963
chr4	155494265	155494330	protein_coding	9430015G10Rik	intron	ENSMUSG00000059939	ProperStrand	17	chr11	62416586	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-7.6793
chr4	149988752	149988852	protein_coding	Rere	exon	ENSMUSG00000039852	ProperStrand	76	chr10	23505152	23505205	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-0.9285
chr12	99497602	99497618	protein_coding	Galc	utr5	ENSMUSG00000021003	NonProperStrand	65	chr1	121318407	121318468	protein_coding	Inhbb	utr5	ENSMUSG00000037035	ProperStrand	10	1	-16.7907
chr2	90235298	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	126620109	126620129	protein_coding	Gm20388	intron	ENSMUSG00000092329	ProperStrand	295	2	-3.0754
chr2	71738289	71738308	protein_coding	Pdk1	utr3	ENSMUSG00000006494	ProperStrand	37	chr17	3177674	3178158	protein_coding	Scaf8	exon	ENSMUSG00000046201	ProperStrand	126	1	-12.7993
chr6	117795659	117795676	protein_coding	Zfp637	exon	ENSMUSG00000059689	NonProperStrand	53	chr4	131908723	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	11	-19.6403
chr17	27647513	27647531	protein_coding	Grm4	intron	ENSMUSG00000063239	ProperStrand	147	chr11	69481390	69481432	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-1.6926
chr11	7067186	7069426	protein_coding	Adcy1	exon	ENSMUSG00000020431	ProperStrand	183	chr8	97876451	97876542	protein_coding	Mmp15	utr5	ENSMUSG00000031790	ProperStrand	13	1	-14.1900
chr11	119142009	119142109	protein_coding	Gaa	intron	ENSMUSG00000025579	ProperStrand	149	chr9	63868722	63868738	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	3	-15.3357
chr7	24779190	24779213	SINE	ID_B1	B4	chr7ID_B124779183	NonProperStrand	54	chr11	7067186	7069426	protein_coding	Adcy1	exon	ENSMUSG00000020431	ProperStrand	183	1	-11.2886
chr14	86728326	86728416	SINE	B1_Mur2	Alu	chr14B1_Mur286728315	ProperStrand	1	chr14	78361986	78362076	protein_coding	Epsti1	intron	ENSMUSG00000022014	NonProperStrand	8	1	-inf
chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	chr11	58768521	58768594	protein_coding	Hist3h2a	exon	ENSMUSG00000078851	ProperStrand	67	1	-8.9665
chr18	8379920	8379937	LTR	RLTR9C	ERVK	chr18RLTR9C8379606	NonProperStrand	5	chr13	19684241	19684257	protein_coding	Epdr1	utr3	ENSMUSG00000002808	ProperStrand	46	2	-19.7369
chr3	142351262	142351281	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr8	13373034	13373088	protein_coding	Tfdp1	exon	ENSMUSG00000038482	ProperStrand	19	1	-10.1190
chr3	96218450	96218484	misc_RNA	Telomerase-vert	.	ENSMUSG00000064796	ProperStrand	443	chr7	38354919	38354935	protein_coding	Zfp536	exon	ENSMUSG00000043456	NonProperStrand	236	1	-6.5850
chr6	113265522	113266589	protein_coding	Brpf1	exon	ENSMUSG00000001632	ProperStrand	23	chr7	148634704	148634784	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-9.5707
chr11	69870769	69870785	protein_coding	Asgr1	exon	ENSMUSG00000020884	NonProperStrand	145	chr2	102291761	102291830	protein_coding	Fjx1	utr5	ENSMUSG00000075012	ProperStrand	13	1	-14.6609
chr7	91258707	91258797	protein_coding	Fam108c	utr3	ENSMUSG00000038459	ProperStrand	19	chr17	35299553	35299633	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-7.0524
chr4	43596770	43596849	protein_coding	Rgp1	utr3	ENSMUSG00000028468	ProperStrand	22	chr9	120038018	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-6.6827
chr14	22488276	22488376	protein_coding	Myst4	exon	ENSMUSG00000021767	ProperStrand	151	chr1	162966206	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-5.7528
chr13	69672930	69672993	protein_coding	Nsun2	intron	ENSMUSG00000021595	NonProperStrand	9	chr6	30397466	30399513	protein_coding	Klhdc10	exon	ENSMUSG00000029775	ProperStrand	14	1	-inf
chr10	127183702	127183723	protein_coding	Zbtb39	utr3	ENSMUSG00000044617	ProperStrand	9	chr5	108334204	108334316	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	3	-18.7984
chr5	136727284	136728415	protein_coding	Cux1	exon	ENSMUSG00000029705	ProperStrand	19	chr16	23110920	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7016
chr15	82144350	82144440	protein_coding	Wbp2nl	exon	ENSMUSG00000022455	ProperStrand	1	chr1	63225606	63225686	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-inf
chr6	124459632	124459650	protein_coding	C1rl	utr3	ENSMUSG00000038527	ProperStrand	3	chr19	8800085	8800106	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-13.9709
chr12	80276976	80276993	protein_coding	Rdh11	utr3	ENSMUSG00000066441	NonProperStrand	23	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-7.7812
chr1	187198068	187202729	protein_coding	Eprs	exon	ENSMUSG00000026615	ProperStrand	149	chr9	64023300	64023330	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	4	-19.2758
chr1	190718217	190718234	protein_coding	Ush2a	intron	ENSMUSG00000026609	NonProperStrand	60	chr9	15118245	15118300	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.4666
chr8	86939629	86939645	protein_coding	Cacna1a	exon	ENSMUSG00000034656	ProperStrand	35	chr2	101953754	101953770	protein_coding	Ldlrad3	exon	ENSMUSG00000048058	NonProperStrand	3	1	-inf
chr18	24793500	24796984	protein_coding	Elp2	exon	ENSMUSG00000024271	ProperStrand	46	chr9	15118536	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	2	-15.6078
chr9	64023023	64023078	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	chr8	59991434	59991450	protein_coding	Hmgb2	exon	ENSMUSG00000054717	NonProperStrand	96	1	-7.7406
chr1	91358413	91358430	protein_coding	Agap1	intron	ENSMUSG00000055013	ProperStrand	229	chr13	49779667	49779806	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-4.4030
chr12	86291854	86291870	protein_coding	1110018G07Rik	intron	ENSMUSG00000042350	NonProperStrand	5	chr11	120208465	120208603	protein_coding	Actg1	exon	ENSMUSG00000062825	ProperStrand	178	1	-16.2257
chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr19	8963028	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	12	-2.5423
chr8	72728530	72728555	protein_coding	Slc25a42	intron	ENSMUSG00000002346	ProperStrand	9	chr16	23111777	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.4225
chr13	88569462	88569482	LTR	RMER6D	ERVK	chr13RMER6D88569354	ProperStrand	42	chr4	131908688	131908722	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.7439
chr2	25312429	25313191	protein_coding	Clic3	exon	ENSMUSG00000015093	ProperStrand	79	chr15	98422700	98422735	protein_coding	Adcy6	utr3	ENSMUSG00000022994	ProperStrand	50	1	-13.1285
chr17	85482653	85489599	protein_coding	Prepl	utr5	ENSMUSG00000024127	ProperStrand	106	chr6	71832629	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-4.5104
chr3	116442714	116442804	SINE	B3	B2	chr3B3116442711	NonProperStrand	1	chr3	116442899	116442979	protein_coding	Agl	utr3	ENSMUSG00000033400	ProperStrand	18	1	-inf
chr5	102265227	102273052	protein_coding	Wdfy3	utr3	ENSMUSG00000043940	ProperStrand	45	chr17	24857716	24857796	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.7918
chr6	118469681	118469697	protein_coding	Ankrd26	intron	ENSMUSG00000007827	NonProperStrand	2	chr11	6428102	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-10.4671
chr9	110049161	110049251	protein_coding	Smarcc1	intron	ENSMUSG00000032481	NonProperStrand	5	chr2	130101988	130102068	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-10.4709
mmu-miR-6239	0	18	miRNA	mmu-miR-6239	.	mmu-miR-6239	ProperStrand	31	chr12	17552949	17553055	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	2	-10.3703
chr2	90235285	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	40307396	40307412	protein_coding	Slc22a16	exon	ENSMUSG00000019834	NonProperStrand	11	1	-7.8469
chr2	165102155	165102245	protein_coding	Slc35c2	utr3	ENSMUSG00000017664	ProperStrand	39	chrX	34622941	34623034	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	9	-19.7229
chr5	40349965	40350055	LTR	ORR1D2	MaLR	chr5ORR1D240349938	NonProperStrand	1	chr5	35904829	35904909	protein_coding	2310079F23Rik	intron	ENSMUSG00000029097	ProperStrand	5	1	-inf
chr1	88247738	88247766	protein_coding	Ncl	intron	ENSMUSG00000026234	ProperStrand	1184	chr1	46132908	46132971	protein_coding	Dnahc7b	intron	ENSMUSG00000041144	NonProperStrand	57	1	-7.4594
chr14	99701154	99701234	protein_coding	Klf5	exon	ENSMUSG00000005148	ProperStrand	39	chr9	114365582	114368718	protein_coding	Glb1	exon	ENSMUSG00000045594	ProperStrand	67	1	-13.9568
chr2	103561906	103584452	protein_coding	Nat10	exon	ENSMUSG00000027185	ProperStrand	124	chr10	23505152	23505238	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-0.9609
chr13	21846026	21846071	protein_coding	Hist1h2bn	exon	ENSMUSG00000069271	ProperStrand	5	chr11	83107810	83107900	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	1	-14.0039
chr5	135857995	135858011	protein_coding	Pom121	exon	ENSMUSG00000053293	NonProperStrand	94	chr1	63225253	63225289	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	1	-7.9385
chr1	166371645	166371694	protein_coding	Atp1b1	exon	ENSMUSG00000026576	ProperStrand	67	chr4	116826848	116826898	protein_coding	Rps8	intron	ENSMUSG00000047675	ProperStrand	262	4	-19.5797
chr15	98350145	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	chr10	90581034	90581282	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	11	-1.1759
chrX	131342985	131343478	protein_coding	Armcx2	utr5	ENSMUSG00000033436	ProperStrand	12	chr17	35089182	35089239	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-8.7239
chr15	76005537	76019173	protein_coding	Plec	exon	ENSMUSG00000022565	ProperStrand	186	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	4	-6.6215
chr8	108415221	108415401	protein_coding	Edc4	exon	ENSMUSG00000036270	ProperStrand	34	chr16	23111372	23111447	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.1231
chr19	8906471	8906523	protein_coding	Hnrnpul2	utr3	ENSMUSG00000071659	ProperStrand	93	chr7	117166785	117166855	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	3	-9.6900
chr15	76541224	76541240	protein_coding	Lrrc14	utr5	ENSMUSG00000033728	ProperStrand	52	chr11	55296277	55296326	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-6.4629
chr8	64017614	64028377	protein_coding	Palld	exon	ENSMUSG00000058056	NonProperStrand	125	chr15	79913286	79913345	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.2951
chr2	165904622	165904638	protein_coding	Sulf2	exon	ENSMUSG00000006800	ProperStrand	171	chr8	13416897	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-4.4190
chr7	19907393	19907428	Simple_repeat	(G)n	Simple_repeat	chr7(G)n19907392	ProperStrand	1	chr3	129598520	129598537	protein_coding	Pla2g12a	utr3	ENSMUSG00000027999	NonProperStrand	10	1	-inf
chr11	52057226	52057245	protein_coding	Skp1a	exon	ENSMUSG00000036309	ProperStrand	8	chr4	131908237	131908298	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-5.0428
chr1	95531931	95532178	protein_coding	Stk25	utr5	ENSMUSG00000026277	ProperStrand	6	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-6.1051
chr9	87608336	87608352	protein_coding	Tbx18	exon	ENSMUSG00000032419	ProperStrand	19	chr11	120208415	120208501	protein_coding	Actg1	exon	ENSMUSG00000062825	ProperStrand	178	1	-13.4640
chr18	67953404	67953429	protein_coding	Seh1l	utr3	ENSMUSG00000079614	ProperStrand	19	chr4	116827121	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-9.3579
chr11	116401340	116401430	protein_coding	Ube2o	exon	ENSMUSG00000020802	ProperStrand	134	chrX	34622945	34623025	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	15	-20.4264
chr17	35822057	35822257	protein_coding	Ddr1	exon	ENSMUSG00000003534	ProperStrand	129	chr16	35932620	35932636	protein_coding	Dtx3l	exon	ENSMUSG00000049502	ProperStrand	152	1	-9.9116
chr14	8756024	8756729	protein_coding	Flnb	exon	ENSMUSG00000025278	ProperStrand	124	chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-6.4204
chr8	72288957	72289023	protein_coding	Zfp866	utr3	ENSMUSG00000043090	ProperStrand	8	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.2180
chr14	100371661	100371683	protein_coding	Klf12	intron	ENSMUSG00000072294	ProperStrand	14	chr2	26494708	26494827	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.9058
chr11	115996379	115996539	protein_coding	Mrpl38	exon	ENSMUSG00000020775	ProperStrand	25	chr11	93315153	93315169	protein_coding	Car10	intron	ENSMUSG00000056158	ProperStrand	25	1	-16.8169
chrX	19802861	19802879	protein_coding	Slc9a7	intron	ENSMUSG00000037341	NonProperStrand	136	chr2	26494708	26494829	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	4	-6.8355
chr7	121413252	121413321	protein_coding	Psma1	exon	ENSMUSG00000030751	ProperStrand	9	chr4	131865458	131865516	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-7.7817
chr10	122002942	122003042	LINE	L1Md_F2	L1	chr10L1Md_F2122002095	ProperStrand	17	chr7	54441774	54442504	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	3	-21.4707
chr11	60554636	60554723	protein_coding	Top3a	intron	ENSMUSG00000002814	ProperStrand	28	chr6	87795257	87795309	protein_coding	Cnbp	exon	ENSMUSG00000030057	ProperStrand	46	1	-15.3833
chr10	20080843	20080860	protein_coding	Fam54a	utr3	ENSMUSG00000019992	ProperStrand	232	chr13	59738374	59738474	protein_coding	Golm1	utr3	ENSMUSG00000021556	ProperStrand	27	1	-12.2161
chr7	52382771	52382789	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	chr4	122970425	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-1.4035
chr12	92811861	92811879	protein_coding	Gtf2a1	intron	ENSMUSG00000020962	ProperStrand	61	chr10	126956487	126956705	protein_coding	Shmt2	exon	ENSMUSG00000025403	ProperStrand	94	4	-18.5953
chr14	76247764	76247842	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	chr10	23505549	23505621	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	3	-0.8334
chr7	38354919	38354935	protein_coding	Zfp536	exon	ENSMUSG00000043456	NonProperStrand	236	chr5	108334195	108334243	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-2.3228
chr17	35647273	35647307	protein_coding	Pou5f1	exon	ENSMUSG00000024406	ProperStrand	104	chr15	82980126	82980226	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	2	-9.8279
chr2	162880559	162885301	protein_coding	Mybl2	exon	ENSMUSG00000017861	ProperStrand	230	chr3	33967164	33967908	protein_coding	Fxr1	utr3	ENSMUSG00000027680	ProperStrand	58	1	-10.6870
chr2	87802622	87802639	protein_coding	Olfr1157	exon	ENSMUSG00000075143	NonProperStrand	49	chr19	8963030	8963082	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.6199
chr5	24011300	24011368	protein_coding	Gbx1	intron	ENSMUSG00000067724	ProperStrand	15	chr2	166890502	166890569	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-10.3658
chr12	84152370	84153492	protein_coding	Rgs6	exon	ENSMUSG00000021219	NonProperStrand	65	chr1	174049636	174050044	protein_coding	Copa	exon	ENSMUSG00000026553	ProperStrand	33	1	-14.3569
chr4	125383305	125389129	protein_coding	Grik3	utr3	ENSMUSG00000001985	ProperStrand	126	chr11	6428089	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-5.3312
chr3	103555965	103555981	protein_coding	Hipk1	intron	ENSMUSG00000008730	NonProperStrand	9	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-7.0004
chr1	36268259	36272994	protein_coding	Uggt1	exon	ENSMUSG00000037470	ProperStrand	67	chr17	35299510	35299590	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-4.5653
chr15	81781313	81781343	protein_coding	Csdc2	utr3	ENSMUSG00000042109	NonProperStrand	3	chr4	131908233	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-7.2242
chr6	115758012	115758119	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr11	62418014	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	10	-4.7076
chr5	5683406	5694384	protein_coding	Steap2	utr5	ENSMUSG00000015653	NonProperStrand	11	chr19	8963027	8963083	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-9.0642
chr19	46108546	46108626	protein_coding	Ldb1	exon	ENSMUSG00000025223	ProperStrand	42	chr9	120038461	120038551	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.6915
chr4	131866152	131866252	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	NonProperStrand	19	chr18	33954826	33954866	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	NonProperStrand	24	1	-17.3697
chr5	65842577	65842677	protein_coding	1110003E01Rik	intron	ENSMUSG00000037822	ProperStrand	10	chr3	85942719	85942776	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	1	-13.3866
chr13	104902156	104902176	protein_coding	Sgtb	intron	ENSMUSG00000042743	ProperStrand	60	chr4	131908356	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.4187
chr1	20552542	20552558	protein_coding	Pkhd1	exon	ENSMUSG00000043760	NonProperStrand	49	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-8.5649
chr16	87399063	87400300	protein_coding	Ltn1	exon	ENSMUSG00000052299	ProperStrand	49	chr11	97642997	97643077	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.8235
chr9	65478555	65478668	protein_coding	Rbpms2	utr5	ENSMUSG00000032387	ProperStrand	85	chr17	6232006	6232022	protein_coding	Tulp4	exon	ENSMUSG00000034377	NonProperStrand	265	1	-9.6363
chr2	166890502	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	chr18	35714157	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	12	-6.2865
chr14	76247741	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	chr16	43886794	43886888	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	13	-14.3752
chrX	75529065	75529082	LTR	RLTRETN_Mm	ERVK	chrXRLTRETN_Mm75528800	NonProperStrand	4	chr9	120038497	120038551	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-8.5118
chr15	79908957	79908984	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	chr4	86232355	86232479	snoRNA	ENSMUSG00000088958_Scarna8	.	ENSMUSG00000088958	ProperStrand	366	14	-20.0864
chr3	156224612	156224628	lincRNA	4930570G19Rik	exon	ENSMUSG00000085084	ProperStrand	326	chr16	90386835	90386853	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	1	-8.8195
chr16	58435561	58435578	protein_coding	Dcbld2	intron	ENSMUSG00000035107	ProperStrand	56	chr4	131865855	131865891	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.8759
chr19	40194285	40194311	LINE	Lx2	L1	chr19Lx240189486	ProperStrand	24	chr14	124353869	124353885	protein_coding	Itgbl1	exon	ENSMUSG00000032925	ProperStrand	159	1	-13.2138
chr7	54443683	54443773	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	chr16	60302537	60302617	protein_coding	Epha6	intron	ENSMUSG00000055540	ProperStrand	9	1	-15.4723
chr11	75990693	75990747	protein_coding	Vps53	utr3	ENSMUSG00000017288	ProperStrand	3	chr10	43648170	43648245	protein_coding	Rtn4ip1	exon	ENSMUSG00000019864	ProperStrand	14	1	-inf
chr8	3439702	3441273	protein_coding	Arhgef18	exon	ENSMUSG00000004568	ProperStrand	26	chr16	23111370	23111469	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	11	-19.7523
chr2	70499760	70499776	protein_coding	Gorasp2	exon	ENSMUSG00000014959	NonProperStrand	14	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	2	-13.0322
chr1	154686161	154692698	protein_coding	Smg7	exon	ENSMUSG00000042772	ProperStrand	88	chr10	23505151	23505236	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-5.2810
chr10	79711930	79711982	protein_coding	Ndufs7	utr5	ENSMUSG00000020153	ProperStrand	15	chr17	39985501	39985541	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-8.7194
chr8	108648024	108648097	protein_coding	Nfatc3	intron	ENSMUSG00000031902	ProperStrand	75	chr7	116664817	116664907	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.1729
chr11	5006321	5006366	protein_coding	Emid1	utr3	ENSMUSG00000034164	ProperStrand	14	chr2	144087324	144087379	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	2	-15.0960
chr17	28973831	28973867	protein_coding	Brpf3	utr3	ENSMUSG00000063952	ProperStrand	32	chr13	49779719	49779803	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	3	-18.2048
chr1	89377777	89377793	protein_coding	Ngef	exon	ENSMUSG00000026259	NonProperStrand	41	chr7	20405404	20405420	protein_coding	Bcl3	exon	ENSMUSG00000053175	ProperStrand	10	1	-17.7422
chr1	162967513	162967569	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	chr17	71990232	71990297	snoRNA	ENSMUSG00000092887_Snord53	.	ENSMUSG00000092887	ProperStrand	53	1	-3.7039
chr2	153481631	153481711	protein_coding	Dnmt3b	intron	ENSMUSG00000027478	NonProperStrand	1	chr9	45712590	45712680	protein_coding	Rnf214	intron	ENSMUSG00000042790	NonProperStrand	2	1	-inf
chr13	9833551	9833676	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr8	12757419	12757437	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	2	-1.9161
chr7	13429889	13429905	protein_coding	Zfp110	exon	ENSMUSG00000058638	NonProperStrand	3	chr8	73419682	73419775	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-9.3031
chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr4	116826699	116826762	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	2	-3.2194
chr7	148633840	148633927	protein_coding	Rplp2	exon	ENSMUSG00000025508	ProperStrand	106	chr1	65118230	65118247	protein_coding	Crygc	exon	ENSMUSG00000025952	ProperStrand	12	1	-15.4587
chr4	40457121	40457140	lincRNA	4933428C19Rik	intron	ENSMUSG00000086355	ProperStrand	3	chr14	33005036	33005090	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-10.2437
chr11	83107800	83107880	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	chr2	91436245	91436335	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-3.1944
chr15	82980100	82980224	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr2	144087332	144087419	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	7	-10.1592
chr10	17547610	17547626	protein_coding	Txlnb	exon	ENSMUSG00000039891	ProperStrand	70	chr5	130300419	130300453	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.2491
chr7	54441687	54441843	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	chr1	79603732	79603844	protein_coding	Ap1s3	utr3	ENSMUSG00000054702	NonProperStrand	11	2	-19.6837
chr11	69480627	69480650	protein_coding	Eif4a1	utr3	ENSMUSG00000059796	ProperStrand	108	chr9	15118322	15118370	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-2.4258
chr19	8928068	8928168	protein_coding	Lrrn4cl	utr3	ENSMUSG00000071656	NonProperStrand	1	chr7	148634764	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-inf
chr9	15119984	15120036	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	chr1	129271706	129271757	snoRNA	ENSMUSG00000065687_snoU6-53	.	ENSMUSG00000065687	ProperStrand	78	1	-6.7321
chr15	82009862	82009962	protein_coding	Srebf2	exon	ENSMUSG00000022463	ProperStrand	592	chr11	62418048	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-1.4801
chr14	24977794	24977884	protein_coding	Dlg5	exon	ENSMUSG00000021782	ProperStrand	46	chr4	131865427	131865507	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-4.5072
chr7	72467934	72467960	protein_coding	Tjp1	exon	ENSMUSG00000030516	ProperStrand	78	chr15	79908939	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-4.9628
chr5	77343947	77344006	protein_coding	Ppat	utr3	ENSMUSG00000029246	ProperStrand	55	chr4	131865913	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-5.3232
chr11	99885311	99885327	protein_coding	Krt33b	exon	ENSMUSG00000057723	NonProperStrand	352	chr13	51743567	51743662	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	2	-5.8763
chr1	66521957	66521973	protein_coding	Unc80	intron	ENSMUSG00000055567	NonProperStrand	212	chr11	106362638	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	2	-8.1205
chr16	87419270	87419296	protein_coding	Ltn1	intron	ENSMUSG00000052299	ProperStrand	49	chr16	87419194	87419269	snoRNA	ENSMUSG00000065647_SNORA2	.	ENSMUSG00000065647	ProperStrand	123	4	-inf
chr4	155544278	155544783	protein_coding	Agrn	exon	ENSMUSG00000041936	ProperStrand	175	chr9	15119968	15120042	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	2	-8.4587
chr7	117055441	117055499	protein_coding	Dennd5a	exon	ENSMUSG00000035901	ProperStrand	22	chr5	74489583	74489663	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-5.7174
chr12	111856572	111856644	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr13	22006769	22006816	tRNA	tRNA85-LeuCAA	.	1417601	ProperStrand	54	1	-8.7640
chr2	179909063	179909576	protein_coding	Adrm1	exon	ENSMUSG00000039041	ProperStrand	27	chr16	23110850	23110875	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.1875
chr4	43505686	43505766	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr2	31850164	31850254	protein_coding	Nup214	exon	ENSMUSG00000001855	ProperStrand	62	1	-3.0116
chr13	58495918	58496953	protein_coding	Hnrnpk	exon	ENSMUSG00000021546	ProperStrand	117	chr11	62416952	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	2	-7.8469
chr5	143665021	143665111	protein_coding	Actb	utr3	ENSMUSG00000029580	ProperStrand	446	chr17	24856665	24856745	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-2.6460
chr8	114371391	114371423	protein_coding	Cfdp1	intron	ENSMUSG00000031954	ProperStrand	32	chr14	76247725	76247815	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-5.3863
chr4	59226824	59229982	protein_coding	Ugcg	exon	ENSMUSG00000028381	ProperStrand	19	chr4	122968662	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-8.5893
chr6	88454982	88455072	protein_coding	Sec61a1	utr3	ENSMUSG00000030082	ProperStrand	46	chr4	131865855	131865905	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.1947
chr12	56593534	56593577	protein_coding	Nfkbia	utr5	ENSMUSG00000021025	ProperStrand	11	chr1	33949222	33949238	protein_coding	Bend6	intron	ENSMUSG00000042182	ProperStrand	2	1	-inf
chr7	52976103	52976183	protein_coding	Rpl18	utr3	ENSMUSG00000059070	ProperStrand	116	chr4	131865369	131865459	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-2.8006
chr4	154865602	154865673	protein_coding	Gnb1	utr5	ENSMUSG00000029064	ProperStrand	69	chr11	6428035	6428088	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.9417
chr8	13876109	13876227	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	chr5	125884616	125884655	tRNA	tRNA1317-AlaTGC	.	1400898	ProperStrand	149	1	-5.3544
chr19	10704150	10704191	protein_coding	Ddb1	utr3	ENSMUSG00000024740	ProperStrand	304	chr5	74489583	74489673	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	3	-3.4578
chr15	10502146	10644202	protein_coding	Rai14	exon	ENSMUSG00000022246	ProperStrand	180	chr4	131908689	131908893	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-0.8983
chr6	87795127	87795217	protein_coding	Cnbp	exon	ENSMUSG00000030057	ProperStrand	46	chrX	34622940	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-3.6584
chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	chr11	62416593	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-2.1507
chr1	181690403	181690432	protein_coding	Ahctf1	exon	ENSMUSG00000026491	ProperStrand	39	chr16	23110922	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.5380
chr11	99885311	99885327	protein_coding	Krt33b	exon	ENSMUSG00000057723	NonProperStrand	352	chr11	98878371	98878456	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-2.9322
chrX	57400695	57400711	protein_coding	Mcf2	utr5	ENSMUSG00000031139	ProperStrand	5	chr11	6428121	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-8.1751
chr2	26494703	26494725	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr14	51547636	51548547	protein_coding	Tmem55b	exon	ENSMUSG00000035953	ProperStrand	14	3	-inf
chr12	55094885	55094901	protein_coding	Npas3	intron	ENSMUSG00000021010	NonProperStrand	29	chr4	131908244	131908297	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.5844
chr6	6002766	6002817	protein_coding	Slc25a13	exon	ENSMUSG00000015112	ProperStrand	78	chr11	106649705	106649722	protein_coding	Ddx5	utr5	ENSMUSG00000020719	NonProperStrand	2	1	-inf
chr9	123045121	123045148	protein_coding	Exosc7	utr3	ENSMUSG00000025785	ProperStrand	17	chr7	116664794	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	4	-15.6854
chr12	89699698	89699715	protein_coding	Adck1	utr3	ENSMUSG00000021044	NonProperStrand	42	chr5	147646411	147646479	snoRNA	ENSMUSG00000077185_SNORD102	.	ENSMUSG00000077185	ProperStrand	142	1	-12.3040
chr4	131457486	131457507	protein_coding	Srsf4	utr3	ENSMUSG00000028911	ProperStrand	101	chr16	43886838	43886928	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	2	-11.3158
chr16	57391760	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr19	8800409	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	4	-0.8871
chr16	17406059	17406078	protein_coding	Pi4ka	intron	ENSMUSG00000041720	ProperStrand	39	chr9	15120930	15121015	snoRNA	ENSMUSG00000065265_SNORA32	.	ENSMUSG00000065265	ProperStrand	101	3	-20.6591
chr5	121655020	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	chr2	130103436	130103502	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	6	-3.0333
chr14	99606881	99606971	protein_coding	Pibf1	intron	ENSMUSG00000022064	NonProperStrand	5	chr7	110699228	110699318	protein_coding	Olfr613	utr5	ENSMUSG00000078624	ProperStrand	16	1	-19.8777
chr3	55435951	55435967	protein_coding	Nbea	exon	ENSMUSG00000027799	NonProperStrand	115	chr11	62418037	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-4.3031
chr1	129379263	129379285	protein_coding	Mgat5	exon	ENSMUSG00000036155	ProperStrand	33	chr4	131908237	131908287	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.3621
chr18	41356147	41356185	miRNA	Mir5097	dead	ENSMUSG00000093361	ProperStrand	221	chr5	74489575	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-1.5548
chr9	106593190	106593280	protein_coding	Rad54l2	utr3	ENSMUSG00000040661	ProperStrand	51	chr7	51505507	51505587	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	1	-9.1065
chr4	59488560	59488622	protein_coding	Rod1	utr3	ENSMUSG00000028382	ProperStrand	52	chr16	23110554	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.7088
chr5	108500704	108500732	protein_coding	Mtf2	intron	ENSMUSG00000029267	ProperStrand	39	chr16	23110854	23111001	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	7	-8.7499
chr19	5842088	5842499	non_coding	Neat1	.	ENSMUSG00000092274	ProperStrand	63	chr18	35716761	35716878	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-7.9073
chr1	36161638	36161728	protein_coding	Hs6st1	utr3	ENSMUSG00000045216	ProperStrand	63	chr8	98270002	98270082	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-5.4462
chr2	90235291	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	8660783	8660801	protein_coding	Efnb2	utr5	ENSMUSG00000001300	NonProperStrand	14	1	-7.3487
chrX	79500902	79500920	LTR	RMER19A	ERVK	chrXRMER19A79500866	NonProperStrand	3	chr11	6428059	6428154	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-inf
chr4	154454992	154456835	protein_coding	Rer1	exon	ENSMUSG00000029048	ProperStrand	9	chr2	158185576	158185666	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-10.3491
chr16	94913939	94913969	protein_coding	Dyrk1a	utr3	ENSMUSG00000022897	ProperStrand	17	chr15	98350182	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	6	-inf
chr7	120697178	120697264	protein_coding	Far1	exon	ENSMUSG00000030759	ProperStrand	72	chr12	110923179	110923231	snoRNA	ENSMUSG00000084487_SNORD113	.	ENSMUSG00000084487	ProperStrand	183	1	-10.7095
chr3	21975631	21975713	protein_coding	Tbl1xr1	utr5	ENSMUSG00000027630	ProperStrand	44	chr16	23110491	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	8	-inf
chr1	182797156	182797256	protein_coding	BC031781	utr3	ENSMUSG00000038806	ProperStrand	64	chr10	23505152	23505204	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.1465
chr6	64088282	64088301	protein_coding	Grid2	intron	ENSMUSG00000071424	NonProperStrand	76	chr4	131908356	131908418	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.0949
chr6	87833327	87833418	Low_complexity	CT-rich	Low_complexity	chr6CT-rich87833346	ProperStrand	1	chr6	87833505	87833595	SINE	ID4	ID	chr6ID487833512	NonProperStrand	1	1	-inf
chr11	79058035	79058056	protein_coding	Wsb1	exon	ENSMUSG00000017677	ProperStrand	12	chr12	99878411	99878511	protein_coding	Spata7	intron	ENSMUSG00000021007	ProperStrand	6	1	-19.9654
chr13	44283986	44284003	LTR	MTD	MaLR	chr13MTD44283869	NonProperStrand	1	chr3	123210854	123210934	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-inf
chr13	73463407	73463423	protein_coding	Ndufs6	intron	ENSMUSG00000021606	NonProperStrand	52	chr17	35088957	35089005	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-6.1497
chr7	151765212	151765228	antisense	Gm10574	.	ENSMUSG00000073778	ProperStrand	357	chr19	9968185	9968230	protein_coding	Incenp	exon	ENSMUSG00000024660	ProperStrand	111	1	-8.5086
chr5	43898430	43898520	LINE	L1ME1	L1	chr5L1ME143898353	NonProperStrand	1	chr5	43898189	43898269	LTR	RMER12	ERVK	chr5RMER1243898076	ProperStrand	1	1	-inf
chr4	129322627	129322662	protein_coding	Kpna6	utr3	ENSMUSG00000003731	ProperStrand	39	chr7	52382237	52382314	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	5	-19.3859
chr14	31998225	31998502	protein_coding	Nisch	exon	ENSMUSG00000021910	ProperStrand	125	chr7	13516168	13516205	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	1	-7.2033
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr11	68886927	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	7	-13.1445
chr5	68012997	68013013	protein_coding	Shisa3	intron	ENSMUSG00000050010	ProperStrand	2	chr4	131908686	131908744	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-8.0336
chr5	74489214	74489317	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr1	92689614	92689630	protein_coding	Col6a3	exon	ENSMUSG00000048126	ProperStrand	79	1	-5.0860
chr10	73787225	73788803	protein_coding	Pcdh15	exon	ENSMUSG00000052613	NonProperStrand	15	chr7	117189863	117189912	protein_coding	Ipo7	intron	ENSMUSG00000066232	NonProperStrand	9	1	-19.8655
chr13	49480049	49480125	protein_coding	Bicd2	utr3	ENSMUSG00000037933	ProperStrand	18	chr5	74489642	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	3	-14.2298
chr7	13510765	13510868	protein_coding	Rps5	exon	ENSMUSG00000012848	ProperStrand	108	chr9	15118332	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	5	-11.3383
chr16	12187338	12187358	protein_coding	Shisa9	intron	ENSMUSG00000022494	ProperStrand	10	chr16	23110909	23110999	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.7978
chr2	30997395	30997475	protein_coding	Fnbp1	utr5	ENSMUSG00000075415	ProperStrand	53	chr1	145626085	145626175	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-9.0780
chr8	125241900	125241919	protein_coding	Gm20388	intron	ENSMUSG00000092329	NonProperStrand	203	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-3.5162
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr10	110918549	110918694	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	24	-18.8232
chr10	80675275	80675291	protein_coding	Atcay	exon	ENSMUSG00000034958	ProperStrand	94	chr9	15130752	15130797	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	1	-8.3148
chr7	4969718	4969790	protein_coding	Zfp524	exon	ENSMUSG00000051184	ProperStrand	1	chr16	23110942	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr15	79908927	79909021	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	chr16	23110828	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	142	-2.4872
chr1	93049793	93049893	protein_coding	Rbm44	exon	ENSMUSG00000070732	ProperStrand	4	chr12	17553061	17553087	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-10.7041
chr2	130109497	130109513	protein_coding	Idh3b	exon	ENSMUSG00000027406	ProperStrand	146	chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	1	-10.7816
chr11	77344658	77344758	protein_coding	Taok1	utr3	ENSMUSG00000017291	ProperStrand	41	chr11	116535465	116535534	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	1	-6.6641
chr10	66689213	66689274	protein_coding	Jmjd1c	exon	ENSMUSG00000037876	ProperStrand	110	chr3	157729963	157729979	protein_coding	Lrrc40	utr3	ENSMUSG00000063052	ProperStrand	147	1	-10.2975
chr17	28465829	28465975	protein_coding	Rpl10a	exon	ENSMUSG00000037805	ProperStrand	121	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-6.5202
chr8	74843979	74844013	protein_coding	Klf2	exon	ENSMUSG00000055148	ProperStrand	82	chr17	24856620	24856720	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-5.8120
chr17	75041103	75041645	protein_coding	Birc6	exon	ENSMUSG00000024073	ProperStrand	110	chr18	35714146	35714226	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-2.3729
chr2	155479396	155483543	protein_coding	Trpc4ap	exon	ENSMUSG00000038324	ProperStrand	38	chr9	15119646	15119726	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.4482
chr2	121010525	121010541	protein_coding	Tubgcp4	exon	ENSMUSG00000027263	NonProperStrand	4	chr5	30595197	30595228	protein_coding	Ept1	utr3	ENSMUSG00000075703	ProperStrand	18	1	-19.3636
chr2	118934516	118934582	LTR	RMER21A	ERV1	chr2RMER21A118934182	NonProperStrand	6	chr9	15119711	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	6	-inf
chr4	123184582	123185733	protein_coding	Macf1	exon	ENSMUSG00000028649	ProperStrand	320	chr5	147646407	147646477	snoRNA	ENSMUSG00000077185_SNORD102	.	ENSMUSG00000077185	ProperStrand	142	1	-8.2352
chr17	24562042	24562142	protein_coding	Rnps1	utr3	ENSMUSG00000034681	ProperStrand	40	chr17	35089182	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-6.2837
chr1	75484537	75484553	protein_coding	Obsl1	exon	ENSMUSG00000026211	NonProperStrand	192	chr1	88247811	88247837	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-2.9254
chr1	40053934	40053951	protein_coding	Map4k4	exon	ENSMUSG00000026074	ProperStrand	348	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-5.4495
chr18	35821082	35821162	protein_coding	Spata24	intron	ENSMUSG00000024352	NonProperStrand	1	chr18	35821190	35821280	protein_coding	Spata24	intron	ENSMUSG00000024352	ProperStrand	1	1	-inf
chr1	166193582	166193660	protein_coding	Slc19a2	utr3	ENSMUSG00000040918	ProperStrand	22	chr11	69481374	69481464	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.1045
chr3	108187818	108187835	protein_coding	Psrc1	utr5	ENSMUSG00000068744	NonProperStrand	12	chr19	8963027	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.2811
chr7	86606606	86606642	protein_coding	Polg	exon	ENSMUSG00000039176	ProperStrand	93	chr1	155287314	155287355	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	2	-12.9179
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr7	148634701	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	4	-1.4502
chr17	53623235	53623252	protein_coding	Rab5a	utr5	ENSMUSG00000017831	ProperStrand	44	chr14	76247711	76247834	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-4.7655
chr7	29136525	29136598	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	chr11	68854833	68854854	tRNA	tRNA1824-GlyTCC	.	282936	ProperStrand	7	2	-10.7478
chr5	74489217	74489307	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr17	71990923	71991000	snoRNA	ENSMUSG00000092713_CT010429.1	.	ENSMUSG00000092713	ProperStrand	182	1	-3.5091
chr11	95594528	95594546	protein_coding	Zfp652	intron	ENSMUSG00000075595	ProperStrand	48	chr5	121655016	121655096	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	3	-10.1110
chr3	152985894	152985976	protein_coding	St6galnac3	intron	ENSMUSG00000052544	ProperStrand	19	chr16	23111468	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.1411
chrX	70918743	70918817	protein_coding	Slc6a8	utr5	ENSMUSG00000019558	ProperStrand	47	chr7	6385955	6385972	protein_coding	Gm16532	intron	ENSMUSG00000045929	NonProperStrand	2	1	-inf
chr11	98878344	98878414	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	chr19	8800084	8800118	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-1.2096
chr7	19591412	19591429	protein_coding	Irf2bp1	exon	ENSMUSG00000044030	NonProperStrand	81	chr3	123210854	123210923	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.5972
chr3	87725332	87725383	protein_coding	Mrpl24	intron	ENSMUSG00000019710	ProperStrand	10	chr19	8963032	8963048	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	2	-20.3576
chr6	130429886	130429906	LINE	Lx4B	L1	chr6Lx4B130429283	ProperStrand	12	chr16	23110827	23110851	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.4686
chr11	120242233	120242274	protein_coding	Nploc4	utr3	ENSMUSG00000039703	ProperStrand	44	chr4	131866170	131866260	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-7.1143
chr5	136364092	136364157	protein_coding	Hspb1	exon	ENSMUSG00000004951	ProperStrand	25	chr1	165243147	165243164	protein_coding	Prrx1	utr5	ENSMUSG00000026586	NonProperStrand	28	1	-16.5905
chr7	133592210	133592226	protein_coding	Atp2a1	exon	ENSMUSG00000030730	ProperStrand	49	chr15	79910276	79910834	protein_coding	Rpl3	exon	ENSMUSG00000060036	ProperStrand	8342	1	-3.9702
chr3	34550478	34550565	protein_coding	Sox2	utr3	ENSMUSG00000074637	ProperStrand	299	chr18	75160717	75160777	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	4	-17.7784
chr12	100012511	100017358	protein_coding	Zc3h14	exon	ENSMUSG00000021012	ProperStrand	27	chr17	24857721	24857811	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-6.3347
chr13	28208732	28208822	LINE	Lx2A	L1	chr13Lx2A28208625	ProperStrand	1	chr13	28208542	28208632	LTR	RLTR13B3	ERVK	chr13RLTR13B328207716	ProperStrand	1	1	-inf
chr16	31694954	31695027	protein_coding	Dlg1	intron	ENSMUSG00000022770	ProperStrand	69	chr4	131866235	131866292	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-3.4076
chr9	121371395	121371482	protein_coding	Trak1	intron	ENSMUSG00000032536	ProperStrand	152	chr4	131908689	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-1.2253
chr11	115451723	115451739	protein_coding	Gga3	exon	ENSMUSG00000020740	NonProperStrand	50	chr4	122970392	122970467	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-7.7789
chr2	181431983	181432001	protein_coding	4930526D03Rik	exon	ENSMUSG00000045794	ProperStrand	1	chr1	10141947	10143475	protein_coding	Arfgef1	exon	ENSMUSG00000067851	NonProperStrand	27	1	-inf
chr13	60823215	60824440	protein_coding	Dapk1	exon	ENSMUSG00000021559	ProperStrand	109	chr4	131865413	131865503	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-2.9101
chr6	47738068	47738115	misc_RNA	Y_RNA	.	ENSMUSG00000065701	ProperStrand	129	chr10	20045390	20045474	protein_coding	Bclaf1	exon	ENSMUSG00000037608	ProperStrand	83	1	-11.1242
chr17	28377370	28377391	protein_coding	Ppard	intron	ENSMUSG00000002250	ProperStrand	25	chr7	116663658	116663754	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	4	-13.4790
chr1	136645343	136645361	protein_coding	Syt2	utr3	ENSMUSG00000026452	ProperStrand	3	chrX	34622905	34622957	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-9.3485
chr5	137511427	137511527	protein_coding	Ap1s1	utr3	ENSMUSG00000004849	ProperStrand	16	chr4	131908809	131908849	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.4136
chrX	146924540	146924569	LTR	MT2A	ERVL	chrXMT2A146924511	NonProperStrand	1	chr7	29136525	29136571	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-inf
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	127861830	127861848	protein_coding	Acoxl	intron	ENSMUSG00000027380	NonProperStrand	12	1	-7.6663
chr4	43505868	43505931	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr15	100416583	100416600	protein_coding	Pou6f1	intron	ENSMUSG00000009739	ProperStrand	44	1	-3.6373
mmu-miR-6240	1	25	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr9	21200696	21200712	protein_coding	Ilf3	exon	ENSMUSG00000032178	NonProperStrand	8	1	-10.0060
chr16	91227718	91227735	protein_coding	Olig2	utr3	ENSMUSG00000039830	NonProperStrand	78	chr9	15119658	15119758	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	6	-13.1629
chr12	85663886	85663931	protein_coding	Zfp410	exon	ENSMUSG00000042472	ProperStrand	6	chr11	69483139	69483229	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-6.9324
chr19	8781818	8781908	protein_coding	Slc3a2	utr3	ENSMUSG00000010095	ProperStrand	63	chr7	54131339	54131419	protein_coding	Ldhc	intron	ENSMUSG00000030851	NonProperStrand	1	1	-inf
chr14	51427116	51427337	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr8	129468756	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	6	-2.7108
chr2	173086415	173086493	protein_coding	Pmepa1	intron	ENSMUSG00000038400	ProperStrand	25	chr10	17443077	17443095	protein_coding	Cited2	utr5	ENSMUSG00000039910	ProperStrand	64	1	-14.9443
chr2	4828450	4828530	protein_coding	Sephs1	utr3	ENSMUSG00000026662	ProperStrand	20	chr4	131908689	131908779	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-10.6615
chr13	118055241	118055291	protein_coding	Emb	intron	ENSMUSG00000021728	ProperStrand	13	chr11	116938557	116938647	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	7	-inf
chr15	103129547	103129627	protein_coding	Copz1	utr3	ENSMUSG00000060992	ProperStrand	45	chr11	6428065	6428155	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.7211
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr2	27315489	27315589	protein_coding	Brd3	intron	ENSMUSG00000026918	ProperStrand	85	1	-4.2870
chr2	5853481	5853556	protein_coding	Dhtkd1	exon	ENSMUSG00000025815	ProperStrand	46	chr17	24857719	24857809	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-4.8137
chr7	28962163	28962181	protein_coding	Fbl	exon	ENSMUSG00000046865	ProperStrand	52	chr16	23111750	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-3.8398
chr10	79325731	79325891	protein_coding	Ptbp1	exon	ENSMUSG00000006498	ProperStrand	129	chr11	103511201	103511217	protein_coding	Rprml	exon	ENSMUSG00000046215	ProperStrand	16	1	-14.4668
chr2	26776699	26776760	protein_coding	Surf4	utr3	ENSMUSG00000014867	ProperStrand	16	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-10.8384
chr19	41841545	41841615	protein_coding	Arhgap19	utr3	ENSMUSG00000025154	ProperStrand	34	chr3	123210854	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	4	-10.6037
chr4	128788771	128788787	protein_coding	Tmem54	utr3	ENSMUSG00000028786	NonProperStrand	6	chr5	77388401	77388481	protein_coding	Paics	exon	ENSMUSG00000029247	ProperStrand	78	1	-17.3079
chr4	122968583	122968718	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	chr15	34370545	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	23	-10.7450
chr14	52914919	52914945	protein_coding	Mettl3	intron	ENSMUSG00000022160	ProperStrand	54	chr9	15119711	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-4.9036
chr10	30320342	30320358	protein_coding	Trmt11	intron	ENSMUSG00000019792	NonProperStrand	26	chr5	124868468	124868496	protein_coding	Sbno1	intron	ENSMUSG00000038095	ProperStrand	134	1	-13.3919
chr15	28216497	28216514	protein_coding	Dnahc5	intron	ENSMUSG00000022262	NonProperStrand	18	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-9.0563
chr1	93838873	93838976	protein_coding	Hdac4	intron	ENSMUSG00000026313	ProperStrand	27	chr1	9932550	9932578	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-9.3364
chr2	167836656	167836685	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	chr3	123210850	123210969	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-2.2971
chr4	64963757	64963774	protein_coding	Pappa	intron	ENSMUSG00000028370	NonProperStrand	32	chr16	23110866	23110940	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.9664
chr1	137008676	137008766	protein_coding	Ptprv	intron	ENSMUSG00000066885	NonProperStrand	1	chr1	162965531	162965589	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-inf
chr11	97490496	97490568	protein_coding	E130012A19Rik	exon	ENSMUSG00000043439	ProperStrand	83	chr18	35714197	35714287	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-2.8586
chr11	120148960	120148976	protein_coding	Bahcc1	exon	ENSMUSG00000039741	NonProperStrand	268	chr14	56491651	56491722	protein_coding	Nynrin	exon	ENSMUSG00000075592	ProperStrand	76	1	-9.8383
chr7	51989786	51989886	protein_coding	Zfp473	utr3	ENSMUSG00000048012	ProperStrand	3	chr16	23111772	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-7.8619
chr10	30338037	30338054	protein_coding	Hint3	exon	ENSMUSG00000019791	ProperStrand	10	chr15	88977274	88977290	protein_coding	Mapk11	intron	ENSMUSG00000053137	NonProperStrand	29	1	-19.3025
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr11	69483237	69483324	protein_coding-noncoding	Eif4a1	utr3	ENSMUSG00000059796	ProperStrand	68	1	-8.0655
chr2	41199972	41199989	protein_coding	Lrp1b	exon	ENSMUSG00000049252	ProperStrand	376	chr3	108160311	108160380	protein_coding	Sort1	utr3	ENSMUSG00000068747	ProperStrand	32	3	-21.0179
chr11	82757121	82757139	antisense	1700003F17Rik	.	ENSMUSG00000086327	NonProperStrand	12	chr9	120037909	120037977	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	3	-17.7570
chr4	139205523	139205565	protein_coding	Aldh4a1	utr3	ENSMUSG00000028737	ProperStrand	20	chr19	8800375	8800465	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	3	-13.2503
chr11	100981913	100982184	protein_coding	Tubg1	exon	ENSMUSG00000035198	ProperStrand	8	chr16	23110939	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.2180
chr7	51503464	51503546	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	chr5	108336401	108336491	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-0.9341
chr5	44152378	44152396	protein_coding-noncoding	Fbxl5	utr3	ENSMUSG00000039753	ProperStrand	1	chr18	80408400	80408496	protein_coding	Gm16286	exon	ENSMUSG00000024571	NonProperStrand	2	1	-inf
chr6	45965480	47225609	protein_coding	Cntnap2	intron	ENSMUSG00000039419	NonProperStrand	283	chr9	15118245	15118359	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	3	-3.1590
chr8	73132104	73132151	protein_coding	Ssbp4	utr5	ENSMUSG00000070003	ProperStrand	39	chr2	158185576	158185654	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	6	-18.8268
chr14	76926611	76926627	LINE	L1MB3	L1	chr14L1MB376926376	ProperStrand	61	chr8	48986096	48986143	protein_coding	Wwc2	exon	ENSMUSG00000031563	ProperStrand	37	1	-14.2552
chr1	104969267	104969347	LINE	L1Md_F2	L1	chr1L1Md_F2104969081	ProperStrand	1	chr1	104969819	104969909	LTR	MER34	ERV1	chr1MER34104969820	NonProperStrand	1	1	-inf
chr1	14908903	14908919	protein_coding	Trpa1	utr5	ENSMUSG00000032769	ProperStrand	24	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-10.8312
chr2	155897282	155897299	SINE	RSINE1	B4	chr2RSINE1155897261	NonProperStrand	2	chr9	15119632	15119706	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-9.8289
chr2	35516842	35516895	protein_coding	Dab2ip	intron	ENSMUSG00000026883	ProperStrand	93	chr3	136526736	136526753	protein_coding	Ppp3ca	intron	ENSMUSG00000028161	NonProperStrand	120	1	-11.0407
chr12	114355281	114359056	protein_coding	Mta1	exon	ENSMUSG00000021144	ProperStrand	74	chr2	26494767	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.7350
chr7	52378422	52378481	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	chr11	62416954	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	4	-6.6485
chr17	27559700	27559717	protein_coding	Grm4	utr3	ENSMUSG00000063239	ProperStrand	147	chr19	8800375	8800465	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-1.9751
chr10	80644147	80644319	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr11	6520361	6520441	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	1	-1.1569
chr13	23392049	23392066	lincRNA	4930557F10Rik	intron	ENSMUSG00000085488	NonProperStrand	51	chr9	44628822	44628922	protein_coding	Mll1	exon	ENSMUSG00000002028	ProperStrand	151	1	-11.7888
chr5	31378627	31379091	protein_coding	Cad	exon	ENSMUSG00000013629	ProperStrand	260	chrX	148696712	148696729	protein_coding	Kdm5c	exon	ENSMUSG00000025332	ProperStrand	139	1	-8.6909
chr11	80177200	80177269	protein_coding	5730455P16Rik	utr3	ENSMUSG00000057181	ProperStrand	28	chr16	23110978	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-3.6312
chr7	51790053	51790071	protein_coding	Pold1	exon	ENSMUSG00000038644	ProperStrand	50	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.6110
chr17	36029480	36029547	protein_coding	Dhx16	utr3	ENSMUSG00000024422	ProperStrand	28	chr1	162966020	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-5.0576
chr17	45497859	45497949	SINE	ID4_	ID	chr17ID4_45497867	ProperStrand	1	chr17	45497707	45497797	SINE	ID_B1	B4	chr17ID_B145497631	ProperStrand	1	1	-inf
chr9	4299367	4302483	protein_coding	Aasdhppt	exon	ENSMUSG00000025894	ProperStrand	121	chr1	71632401	71632453	protein_coding	Fn1	utr3	ENSMUSG00000026193	ProperStrand	931	1	-6.4411
chr11	108380142	108380454	protein_coding	Ccdc46	exon	ENSMUSG00000020728	ProperStrand	14	chr16	31108237	31109759	protein_coding	Acap2	exon	ENSMUSG00000049076	ProperStrand	17	1	-20.0451
chr17	33918278	33918329	protein_coding	Angptl4	exon	ENSMUSG00000002289	ProperStrand	21	chr1	167828267	167828284	protein_coding	Pou2f1	intron	ENSMUSG00000026565	NonProperStrand	33	1	-16.5812
chr17	85482654	85489599	protein_coding	Prepl	utr5	ENSMUSG00000024127	ProperStrand	106	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.9702
chr19	46153197	46156085	protein_coding	Nolc1	exon	ENSMUSG00000015176	ProperStrand	53	chr3	68889026	68889238	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	5	-14.8604
chr12	99497602	99497618	protein_coding	Galc	utr5	ENSMUSG00000021003	NonProperStrand	65	chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	1	-12.4058
chr18	10052133	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chrX	99603783	99603800	protein_coding-noncoding	Hdac8	utr3	ENSMUSG00000067567	NonProperStrand	1	1	-inf
chr10	84426052	84426069	protein_coding	Ric8b	intron	ENSMUSG00000035620	NonProperStrand	14	chr19	8799830	8799883	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-7.8511
chr18	38003791	38015230	protein_coding	Diap1	exon	ENSMUSG00000024456	ProperStrand	77	chr4	131908236	131908429	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-3.4085
chr1	102076760	102076791	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	chr2	26768389	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	2	-3.6950
mmu-miR-6240	3	25	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr3	66790039	66790055	protein_coding	Rsrc1	utr5	ENSMUSG00000034544	NonProperStrand	71	2	-9.1117
chr7	48780516	48780533	LTR	RMER13A	ERVK	chr7RMER13A48780447	ProperStrand	15	chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	1	-14.1887
chr5	33362239	33362329	protein_coding	Ywhah	exon	ENSMUSG00000018965	ProperStrand	81	chr4	131908812	131908892	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.8446
chr13	51806985	51808091	protein_coding	Sema4d	exon	ENSMUSG00000021451	ProperStrand	42	chr14	118969812	118969830	protein_coding	Abcc4	intron	ENSMUSG00000032849	NonProperStrand	24	1	-15.8992
chrX	140804263	140804399	protein_coding-noncoding	Alg13	utr3	ENSMUSG00000041718	ProperStrand	87	chr9	15119643	15119733	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	11	-19.3000
chr8	26933206	26933267	protein_coding	Ash2l	exon	ENSMUSG00000031575	ProperStrand	113	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-5.7347
chr3	118429939	118429955	protein_coding	Dpyd	intron	ENSMUSG00000033308	NonProperStrand	12	chr12	112779195	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	4	-19.1212
chr6	92104375	92104391	protein_coding	Nr2c2	exon	ENSMUSG00000005893	ProperStrand	101	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-10.6393
chr12	29432253	29432325	protein_coding	Ttc15	exon	ENSMUSG00000020628	ProperStrand	15	chr9	85624799	85624827	protein_coding	Ibtk	exon	ENSMUSG00000035941	ProperStrand	14	1	-19.9522
chr6	121598183	121599809	protein_coding	A2m	exon	ENSMUSG00000030111	ProperStrand	17	chr8	113366285	113366320	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	1	-11.7389
chr13	8973545	8976507	protein_coding	Gtpbp4	exon	ENSMUSG00000021149	ProperStrand	26	chr15	79913288	79913313	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-5.1914
chr6	114900484	114900549	protein_coding	Vgll4	intron	ENSMUSG00000030315	ProperStrand	12	chr4	131865395	131865485	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-7.1824
chr4	116676206	116676228	protein_coding	Hectd3	utr3	ENSMUSG00000046861	ProperStrand	10	chr5	92485086	92485218	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	3	-20.1542
chr7	61816674	61816698	LINE	L1VL4	L1	chr7L1VL461815754	NonProperStrand	2	chr7	116664809	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-inf
chr4	43505818	43505908	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr9	43920722	43920762	protein_coding	Rnf26	exon	ENSMUSG00000053128	ProperStrand	30	2	-7.3030
chr11	115439398	115439488	protein_coding	Nup85	intron	ENSMUSG00000020739	ProperStrand	33	chr5	130300464	130300544	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.5813
chr15	89207093	89207117	protein_coding	Tymp	exon	ENSMUSG00000022615	NonProperStrand	1	chr4	131865855	131865901	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr2	119593446	119593536	protein_coding	Rpap1	exon	ENSMUSG00000034032	ProperStrand	96	chr9	120037971	120038051	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-3.8154
chr1	52222177	52222246	protein_coding	Gls	utr3	ENSMUSG00000026103	ProperStrand	56	chr3	152450608	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	3	-19.2137
chr6	67217345	67222209	protein_coding	Serbp1	exon	ENSMUSG00000036371	ProperStrand	261	chr7	116664812	116664892	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	5	-4.1091
chr14	25673634	25673651	DNA	MER63D	AcHobo	chr14MER63D25673510	NonProperStrand	65	chr15	79913288	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-3.4448
chr4	154996641	154996666	protein_coding	Slc35e2	utr3	ENSMUSG00000042202	ProperStrand	6	chr2	158185577	158185654	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-11.2225
chr18	65369987	65372452	protein_coding	Nedd4l	exon	ENSMUSG00000024589	NonProperStrand	15	chr4	56910548	56910614	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	2	-14.2042
chr5	24071658	24071703	protein_coding	Abcf2	utr3	ENSMUSG00000028953	ProperStrand	50	chr10	23505217	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.4914
chr2	32097273	32097316	protein_coding	Pomt1	exon	ENSMUSG00000039254	ProperStrand	8	chr10	60692417	60692433	protein_coding	Adamts14	exon	ENSMUSG00000059901	NonProperStrand	127	1	-15.9311
chr4	143400749	143401405	protein_coding	Gm13084	exon	ENSMUSG00000059218	ProperStrand	5	chr17	35384153	35384174	snoRNA	ENSMUSG00000065273_SNORD83	.	ENSMUSG00000065273	ProperStrand	244	1	-15.6671
chr14	15572352	15572370	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr7	129487243	129487260	protein_coding	Prkcb	intron	ENSMUSG00000052889	ProperStrand	16	1	-13.9667
chr12	110892841	110892869	snoRNA	ENSMUSG00000064621_AF357355	.	ENSMUSG00000064621	ProperStrand	60	chr11	69483194	69483237	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.4498
chr7	67129989	67130746	protein_coding	Snrpn	exon	ENSMUSG00000000948	ProperStrand	32	chr16	23110842	23110922	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.9664
chr11	106647782	106648246	protein_coding	Ddx5	exon	ENSMUSG00000020719	ProperStrand	181	chr14	80018174	80018214	protein_coding	Sugt1	intron	ENSMUSG00000022024	ProperStrand	11	1	-14.5641
chr7	24779190	24779213	SINE	ID_B1	B4	chr7ID_B124779183	NonProperStrand	54	chr1	165243148	165243164	protein_coding	Prrx1	utr5	ENSMUSG00000026586	NonProperStrand	28	1	-15.0603
chr7	13510748	13510838	protein_coding	Rps5	exon	ENSMUSG00000012848	ProperStrand	108	chr7	29136554	29136634	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-2.7119
chr5	108334194	108334284	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	chr1	145626101	145626181	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-1.0273
chr3	129883844	129883862	protein_coding	Col25a1	utr5	ENSMUSG00000058897	ProperStrand	27	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-7.8155
chr13	9833552	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr5	125519269	125519309	protein_coding	Ncor2	exon	ENSMUSG00000029478	ProperStrand	377	1	-1.6867
chr2	26495493	26495555	lincRNA	Snhg7	intron	ENSMUSG00000091299	ProperStrand	2137	chr14	51463983	51463999	protein_coding	Tep1	exon	ENSMUSG00000006281	NonProperStrand	73	1	-5.8088
chr3	152450610	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	chr2	32081809	32082472	protein_coding	Prrc2b	exon	ENSMUSG00000039262	ProperStrand	344	1	-5.3530
chr19	44378639	44378695	protein_coding	Scd2	utr3	ENSMUSG00000025203	ProperStrand	219	chr11	6428089	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-2.1782
chr5	122941766	122941792	protein_coding	Atp2a2	exon	ENSMUSG00000029467	ProperStrand	166	chr9	47477649	47477749	protein_coding	Cadm1	intron	ENSMUSG00000032076	ProperStrand	77	6	-20.7260
chr10	7322634	7322734	protein_coding	Lrp11	exon	ENSMUSG00000019796	ProperStrand	12	chr16	23109047	23109091	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-10.5507
chr6	122678024	122678073	protein_coding	Slc2a3	utr3	ENSMUSG00000003153	ProperStrand	682	chr7	133938884	133938916	protein_coding	Aldoa	utr3	ENSMUSG00000030695	ProperStrand	721	2	-6.1172
chr1	160535600	160535619	protein_coding	Astn1	intron	ENSMUSG00000026587	ProperStrand	8	chr13	58510493	58510511	protein_coding	Rmi1	exon	ENSMUSG00000035367	ProperStrand	23	1	-18.5844
chr13	26435042	26435132	LINE	Lx2	L1	chr13Lx226434738	NonProperStrand	1	chr8	71909421	71909501	LINE	L1VL4	L1	chr8L1VL471909147	NonProperStrand	1	1	-inf
chr5	32794948	32794968	protein_coding	Ppp1cb	utr3	ENSMUSG00000014956	ProperStrand	25	chr4	147912662	147912912	protein_coding	Mtor	exon	ENSMUSG00000028991	ProperStrand	65	1	-14.9246
chr11	3649570	3649587	protein_coding	Osbp2	intron	ENSMUSG00000020435	ProperStrand	60	chr18	34880002	34880019	protein_coding	Gfra3	utr5	ENSMUSG00000024366	ProperStrand	41	1	-14.0849
chr17	35299507	35299599	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	chr9	64022855	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	5	-4.2762
chr16	72800514	72800532	protein_coding	Robo1	intron	ENSMUSG00000022883	NonProperStrand	188	chr11	106362304	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	3	-8.9994
chr11	78579340	78579430	LTR	MTE-int	MaLR	chr11MTE-int78579247	ProperStrand	1	chr11	78579112	78579192	LTR	ORR1E	MaLR	chr11ORR1E78578838	ProperStrand	1	1	-inf
chr7	4982011	4982112	protein_coding	Zfp865	exon	ENSMUSG00000074405	ProperStrand	15	chr19	8799851	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-7.7094
chr7	20117715	20117744	protein_coding	Ppp1r37	exon	ENSMUSG00000051403	ProperStrand	34	chr7	148634801	148634837	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-8.3816
chr9	65081521	65081621	protein_coding	Parp16	exon	ENSMUSG00000032392	ProperStrand	6	chr16	23110555	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-6.9463
chr11	59550660	59550711	protein_coding	Mprip	exon	ENSMUSG00000005417	ProperStrand	58	chr17	35087894	35087951	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	3	-12.3393
chr10	86221857	86221873	protein_coding	BC030307	exon	ENSMUSG00000044937	ProperStrand	77	chr4	131865867	131865918	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.3962
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr10	39978386	39978485	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-1.5490
chr14	14949088	14949112	protein_coding	Psmd6	exon	ENSMUSG00000021737	ProperStrand	10	chr7	118219575	118219626	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-7.7388
chr8	74493723	74493813	protein_coding	Zfp961	utr3	ENSMUSG00000052446	ProperStrand	35	chr15	82980142	82980222	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-8.2182
chr6	148211404	148219904	protein_coding	Tmtc1	exon	ENSMUSG00000030306	NonProperStrand	7	chr7	29136525	29136560	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-6.5022
chr16	22412933	22412973	protein_coding	Etv5	exon	ENSMUSG00000013089	ProperStrand	88	chr10	110918674	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-2.7615
chr7	148620105	148620151	protein_coding	Slc25a22	utr5	ENSMUSG00000019082	ProperStrand	18	chr10	23505190	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.2069
chr13	9833562	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr19	44374138	44378618	protein_coding	Scd2	exon	ENSMUSG00000025203	ProperStrand	219	6	-14.5154
chr15	88640463	88640586	protein_coding	Alg12	intron	ENSMUSG00000035845	ProperStrand	5	chr7	117190023	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-8.3295
chr18	67813638	67813728	protein_coding	Psmg2	utr3	ENSMUSG00000024537	ProperStrand	13	chr7	150717344	150717424	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-8.5801
chr10	127521231	127521271	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	chr19	8799581	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	4	-8.9664
chr3	68406227	68406296	protein_coding	Schip1	intron	ENSMUSG00000027777	ProperStrand	70	chr16	23111693	23111825	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-3.0816
chr10	75109744	75109813	protein_coding	Cabin1	exon	ENSMUSG00000020196	ProperStrand	62	chr1	162965531	162965554	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-5.5238
chr16	33058897	33060191	protein_coding	Rpl35a	exon	ENSMUSG00000060636	ProperStrand	33	chr12	106269284	106269384	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	2	-8.7122
chr8	8681423	8681523	protein_coding	Arglu1	intron	ENSMUSG00000040459	ProperStrand	20	chr19	8799827	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-7.1233
chr12	110874223	110874290	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	chr5	74489646	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	4	-4.7885
chr4	19452266	19452366	protein_coding	Cpne3	exon	ENSMUSG00000028228	ProperStrand	7	chr7	116663714	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-6.6732
chr16	16323801	16324088	protein_coding	Dnm1l	exon	ENSMUSG00000022789	ProperStrand	29	chr4	118809639	118809719	protein_coding	Slc2a1	utr3	ENSMUSG00000028645	ProperStrand	361	1	-11.1872
chr13	76341035	76341055	protein_coding	Fam81b	intron	ENSMUSG00000078966	NonProperStrand	220	chr11	62416601	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-2.7497
chr11	98857001	98857028	protein_coding	Top2a	exon	ENSMUSG00000020914	ProperStrand	324	chr7	116664811	116664870	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-0.7880
chr2	22444377	22445049	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	chr19	8798743	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	5	-3.7851
mmu-miR-5121	0	21	miRNA	mmu-miR-5121	.	mmu-miR-5121	ProperStrand	4	chr4	131866155	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-9.1999
chr3	138218602	138218650	protein_coding	Eif4e	utr3	ENSMUSG00000028156	ProperStrand	25	chr6	94776844	94776875	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	1	-10.8700
chr10	41644311	41644329	protein_coding	Armc2	exon	ENSMUSG00000071324	ProperStrand	281	chr9	15119967	15119991	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-4.2452
chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	chr17	36124718	36124789	protein_coding	Gnl1	exon	ENSMUSG00000024429	ProperStrand	70	1	-9.5639
chr4	151762578	151762601	protein_coding	Chd5	utr3	ENSMUSG00000005045	ProperStrand	51	chr5	54389948	54389964	protein_coding	Stim2	utr5	ENSMUSG00000039156	NonProperStrand	22	1	-15.6807
chr15	3934634	3934712	protein_coding	AW549877	utr3	ENSMUSG00000041935	ProperStrand	17	chr16	46154014	46154114	protein_coding	Gm4737	exon	ENSMUSG00000048087	ProperStrand	10	1	-19.2790
chr2	25385889	25392196	protein_coding	Traf2	exon	ENSMUSG00000026942	ProperStrand	3	chr11	97642952	97643042	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-8.5513
chr8	107828686	107828714	protein_coding	E2f4	utr3	ENSMUSG00000014859	ProperStrand	32	chr14	35505918	35508252	protein_coding	Wapal	exon	ENSMUSG00000041408	ProperStrand	93	1	-13.7040
chr14	87659491	87659512	LTR	MTEa	MaLR	chr14MTEa87659331	NonProperStrand	83	chr7	51505289	51505308	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	1	-7.5040
chr7	52715002	52715101	protein_coding	Ftl1	utr5	ENSMUSG00000050708	ProperStrand	807	chr9	120037980	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	7	-7.1323
chr11	62418013	62418037	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr2	25105896	25107254	protein_coding	Ndor1	exon	ENSMUSG00000006471	NonProperStrand	84	1	-8.2982
chr11	98878375	98878419	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	chr13	96100594	96100694	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	1	-1.5362
chr15	99433433	99433452	protein_coding	Aqp6	exon	ENSMUSG00000043144	NonProperStrand	45	chr10	23505150	23505258	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-4.7670
chr7	28146782	28146798	protein_coding	Spnb4	exon	ENSMUSG00000011751	NonProperStrand	84	chr18	74938289	74938379	snoRNA	ENSMUSG00000089235_SCARNA17	.	ENSMUSG00000089235	ProperStrand	1128	1	-6.7844
chr15	36538198	36538298	protein_coding	Pabpc1	utr5	ENSMUSG00000022283	ProperStrand	908	chr13	49779679	49779746	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-1.9603
chr3	87967002	87971461	protein_coding	Mef2d	exon	ENSMUSG00000001419	ProperStrand	15	chr15	79908957	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	2	-13.2291
chr11	118900007	118900024	protein_coding	Cbx8	exon	ENSMUSG00000025578	ProperStrand	95	chr8	73419657	73419747	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.3295
chr18	73693115	73693188	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr1	88252836	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	3	-1.3040
chr2	168170550	168170593	SINE	ID_B1	B4	chr2ID_B1168170368	NonProperStrand	1	chr7	53069578	53069630	protein_coding	Cyth2	utr5	ENSMUSG00000003269	ProperStrand	15	1	-inf
chr10	80641827	80641888	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr10	6063959	6063977	protein_coding	Akap12	intron	ENSMUSG00000038587	ProperStrand	1008	1	-1.1292
chr9	30235085	30235102	protein_coding	Snx19	exon	ENSMUSG00000031993	ProperStrand	353	chr7	148634701	148634820	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-1.0628
chr4	149618399	149619229	protein_coding	Eno1	exon	ENSMUSG00000063524	ProperStrand	432	chr2	32818804	32818884	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-1.8893
chr1	162888517	162888536	protein_coding	Rc3h1	intron	ENSMUSG00000040423	NonProperStrand	1	chr11	106362304	106362341	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-inf
chr13	73930035	73930125	protein_coding	Slc12a7	exon	ENSMUSG00000017756	ProperStrand	80	chr5	108334245	108336493	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-4.2697
chrX	16259337	16259366	protein_coding	Maoa	exon	ENSMUSG00000025037	ProperStrand	17	chr16	23111372	23111466	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.3471
chr10	126935528	126935588	protein_coding	R3hdm2	exon	ENSMUSG00000025404	ProperStrand	33	chr17	24857736	24857826	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.3507
chr11	6316598	6316698	protein_coding-noncoding	Ppia	utr5	ENSMUSG00000071866	ProperStrand	2	chr9	15119647	15119696	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-9.8289
chrX	98162333	98162349	protein_coding	Tex11	intron	ENSMUSG00000009670	NonProperStrand	1	chr10	79518829	79518933	protein_coding	Gpx4	exon	ENSMUSG00000075706	ProperStrand	55	1	-inf
chr13	9833553	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr2	153034718	153034777	protein_coding	Tm9sf4	utr3	ENSMUSG00000068040	ProperStrand	27	2	-10.5864
chr16	18240811	18240901	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	chr11	69483136	69483251	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	11	-7.1394
chr11	6428060	6428156	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr10	127895550	127895574	tRNA	tRNA688-SerCGA	.	867854	ProperStrand	71	1	-2.8910
chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	chr8	97362343	97366530	protein_coding	Coq9	exon	ENSMUSG00000031782	ProperStrand	6	1	-14.6294
chr8	38290651	38290668	LTR	RLTR20C	ERVK	chr8RLTR20C38290617	ProperStrand	1	chr14	31827502	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-inf
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr17	25996060	25996076	protein_coding	Wdr90	exon	ENSMUSG00000073434	ProperStrand	91	1	-8.5351
chr15	64109807	64109907	protein_coding	Asap1	intron	ENSMUSG00000022377	ProperStrand	29	chr7	116663715	116663767	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.8258
chr2	8299645	8299735	LTR	IAPEz-int	ERVK	chr2IAPEz-int8298959	NonProperStrand	1	chr2	8299872	8299952	LTR	IAPLTR2_Mm	ERVK	chr2IAPLTR2_Mm8299780	NonProperStrand	1	1	-inf
chr2	84530865	84531297	protein_coding	Zdhhc5	exon	ENSMUSG00000034075	NonProperStrand	144	chr8	32260335	32260424	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-3.0042
chr13	96635441	96635478	protein_coding	Iqgap2	intron	ENSMUSG00000021676	ProperStrand	19	chr18	35716764	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.2504
chr17	28314494	28314513	protein_coding	Zfp523	intron	ENSMUSG00000024220	NonProperStrand	2	chr11	116938557	116938647	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-13.5975
chr2	69339628	69339645	protein_coding	Lrp2	exon	ENSMUSG00000027070	NonProperStrand	8	chr17	35087895	35087926	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-9.2836
chr1	24619476	24619536	protein_coding	Gm10222	exon	ENSMUSG00000067736	NonProperStrand	11	chr11	62416579	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-8.5772
chr6	84570275	84570339	protein_coding	Exoc6b	utr3	ENSMUSG00000033769	ProperStrand	23	chr16	23111691	23111781	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-6.1204
chr6	83719994	83720021	protein_coding	Tex261	utr3	ENSMUSG00000014748	ProperStrand	13	chr11	97643002	97643092	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	4	-17.0314
chr10	72437414	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr9	15130912	15131005	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	1	-4.3059
chr3	95741044	95741820	protein_coding	Anp32e	exon	ENSMUSG00000015749	ProperStrand	25	chr4	131908298	131908332	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.8464
chr7	119167199	119196769	protein_coding	Usp47	utr5	ENSMUSG00000059263	ProperStrand	40	chr4	131908689	131908741	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.8200
chr9	64026124	64026214	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	chr14	33005153	33005233	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	2	-1.0513
chr5	33332234	33332303	protein_coding	Depdc5	intron	ENSMUSG00000037426	ProperStrand	26	chr1	88248621	88248638	snoRNA	ENSMUSG00000064696_SNORD20	.	ENSMUSG00000064696	ProperStrand	89	1	-14.2197
chr3	9435933	9541927	protein_coding	Zfp704	utr3	ENSMUSG00000040209	ProperStrand	67	chr16	23110829	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-1.2172
chr16	52273239	52273257	protein_coding	Alcam	intron	ENSMUSG00000022636	NonProperStrand	6	chr9	15119631	15119736	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-7.1405
chr7	109044954	109046253	protein_coding	3200002M19Rik	utr5	ENSMUSG00000030649	ProperStrand	22	chr2	32818862	32818879	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-7.4669
chr10	127949428	127952749	protein_coding	Esyt1	exon	ENSMUSG00000025366	ProperStrand	31	chr18	35714145	35714216	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.6912
chr11	100240911	100241865	protein_coding	Jup	exon	ENSMUSG00000001552	ProperStrand	123	chr18	35714216	35714247	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-2.1870
chr12	58644110	58644135	protein_coding	Foxa1	exon	ENSMUSG00000035451	ProperStrand	25	chr7	116663646	116663767	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.1077
chr15	83410926	83411020	protein_coding	Ttll12	exon	ENSMUSG00000016757	ProperStrand	36	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.8249
chr8	83243538	83243638	protein_coding	Smarca5	exon	ENSMUSG00000031715	ProperStrand	115	chr19	8799836	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-3.7129
chr11	21219940	21219959	protein_coding	Vps54	utr3	ENSMUSG00000020128	ProperStrand	15	chr7	117189957	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	8	-21.8821
chr11	76542754	76542832	protein_coding	Gosr1	utr3	ENSMUSG00000010392	ProperStrand	9	chr18	35716702	35716761	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-5.7446
chrX	95533056	95533146	LINE	Lx2	L1	chrXLx295533060	ProperStrand	1	chrX	95533195	95533286	LINE	Lx	L1	chrXLx95533145	ProperStrand	1	1	-inf
chr3	96363749	96363887	protein_coding	Txnip	exon	ENSMUSG00000038393	ProperStrand	172	chr6	38483966	38484004	tRNA	tRNA107-ArgCCT	.	244201	ProperStrand	63	2	-17.3221
chr4	94221300	94221380	protein_coding	5830433M19Rik	intron	ENSMUSG00000028578	NonProperStrand	3	chr5	31431252	31431342	protein_coding	Trim54	intron	ENSMUSG00000062077	NonProperStrand	1	1	-inf
chr19	42019011	42019171	protein_coding	Mms19	utr3	ENSMUSG00000025159	ProperStrand	52	chr5	108336431	108336495	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-5.1583
chr17	27061073	27061173	protein_coding	Kifc5b	exon	ENSMUSG00000024301	ProperStrand	6	chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-12.4916
chr14	34172379	34172420	protein_coding	Arhgap22	exon	ENSMUSG00000063506	ProperStrand	11	chr5	130300442	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-5.7288
chr11	48615575	48615609	snoRNA	ENSMUSG00000064725_Snord96a	.	ENSMUSG00000064725	ProperStrand	89	chr5	108336363	108336460	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-6.9138
chr6	88039992	88040092	protein_coding	Rpn1	exon	ENSMUSG00000030062	ProperStrand	58	chr7	117190044	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.3943
chr16	84861780	84861807	protein_coding	Gabpa	utr3	ENSMUSG00000008976	ProperStrand	38	chr8	23645709	23645748	protein_coding	Slc20a2	utr5	ENSMUSG00000037656	ProperStrand	63	1	-14.1399
chr11	76626015	76626090	protein_coding	Cpd	exon	ENSMUSG00000020841	ProperStrand	46	chr9	15119638	15119676	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-7.9015
chr4	116875170	116875249	snRNA	ENSMUSG00000070228_U5	.	ENSMUSG00000070228	ProperStrand	131	chr15	79908956	79908983	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	2	-6.6766
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr9	64143736	64143826	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-4.9216
chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	chr17	35989570	35989586	protein_coding	Mdc1	exon	ENSMUSG00000061607	ProperStrand	85	1	-9.1747
chr11	94523681	94523704	SINE	B1_Mus1	Alu	chr11B1_Mus194523649	NonProperStrand	2	chr4	131908808	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-8.0336
chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	chr8	24042846	24042864	protein_coding	Myst3	exon	ENSMUSG00000031540	ProperStrand	111	1	-11.3308
chr14	15572351	15572370	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr2	121949510	121949527	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	1	-8.2740
chr11	16307999	16308016	protein_coding	Vstm2a	intron	ENSMUSG00000048834	NonProperStrand	13	chr7	16524111	16524179	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	1	-12.8350
chr8	63704832	63704850	protein_coding	Sh3rf1	exon	ENSMUSG00000031642	ProperStrand	50	chr7	71057478	71057538	protein_coding	Klf13	intron	ENSMUSG00000052040	ProperStrand	28	1	-15.2127
chr13	75905593	75905618	snoRNA	ENSMUSG00000077449_SNORA42	.	ENSMUSG00000077449	ProperStrand	26	chr10	110918557	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-5.0402
chr1	130287805	130287859	protein_coding	Dars	intron	ENSMUSG00000026356	ProperStrand	28	chr12	17552970	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-6.5920
chr2	90235294	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr18	32263317	32263333	protein_coding	Iws1	utr3	ENSMUSG00000024384	ProperStrand	72	2	-6.8999
chr12	103157554	103157602	protein_coding	Atxn3	utr3	ENSMUSG00000021189	ProperStrand	20	chr16	74140263	74140280	protein_coding	Robo2	intron	ENSMUSG00000052516	ProperStrand	7	1	-20.0012
chr2	177246751	177246831	LTR	RLTR45-int	ERVK	chr2RLTR45-int177245594	ProperStrand	1	chr2	177247120	177247210	LTR	RLTR45	ERVK	chr2RLTR45177246886	ProperStrand	1	1	-inf
chr19	29651137	29651154	protein_coding	C030046E11Rik	intron	ENSMUSG00000038658	NonProperStrand	3	chr18	33954816	33954899	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-9.7168
chr7	4583757	4583943	protein_coding	Ppp6r1	utr3	ENSMUSG00000052296	ProperStrand	20	chr16	23111374	23111454	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.0472
chr19	44188427	44188517	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr3	85942723	85942780	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	1	-4.2888
chr6	56799741	56810719	protein_coding	Fkbp9	exon	ENSMUSG00000029781	ProperStrand	39	chr5	108336376	108336490	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-9.3531
chr6	62130856	62130878	protein_coding	Fam190a	intron	ENSMUSG00000039578	ProperStrand	28	chr3	68889027	68889127	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-4.6927
chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	chr5	108333572	108333607	snoRNA	ENSMUSG00000064453_Snord21	.	ENSMUSG00000064453	ProperStrand	201	1	-7.4597
chr1	166367619	166371694	protein_coding	Atp1b1	utr3	ENSMUSG00000026576	ProperStrand	67	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	8	-6.4115
chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	chr11	62416575	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	5	-2.9264
chr7	52084642	52084697	protein_coding	Nup62	exon	ENSMUSG00000043858	ProperStrand	47	chr19	31157628	31157644	protein_coding	Cstf2t	exon	ENSMUSG00000053536	ProperStrand	48	1	-14.2590
chr10	10673954	10673971	protein_coding	Grm1	intron	ENSMUSG00000019828	ProperStrand	38	chr10	116491164	116491955	protein_coding	Cct2	exon	ENSMUSG00000034024	ProperStrand	100	1	-13.2118
chr16	78367505	78367529	protein_coding	Btg3	intron	ENSMUSG00000022863	ProperStrand	1	chr9	120039574	120039622	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-inf
chr17	35148608	35148811	protein_coding	Vars	exon	ENSMUSG00000007029	ProperStrand	121	chr12	107075047	107075127	protein_coding	Papola	utr3	ENSMUSG00000021111	ProperStrand	67	1	-11.6824
chr4	126530569	126530669	protein_coding	AU040320	utr3	ENSMUSG00000028830	ProperStrand	14	chr2	26493366	26493390	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	8	-inf
chr10	89163357	89163383	lincRNA	1500026H17Rik	exon	ENSMUSG00000087686	ProperStrand	2	chr17	34171140	34172608	protein_coding	Rxrb	exon	ENSMUSG00000039656	ProperStrand	34	1	-19.7854
chr7	26559612	26559628	protein_coding	Axl	exon	ENSMUSG00000002602	NonProperStrand	47	chr1	162965980	162965999	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-4.0601
chr3	67402014	67403918	protein_coding	Mfsd1	exon	ENSMUSG00000027775	ProperStrand	15	chr11	69481337	69481417	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.8683
chr7	129154241	129164503	protein_coding	Gga2	exon	ENSMUSG00000030872	ProperStrand	65	chr6	53383968	53384003	snRNA	ENSMUSG00000065216_U1	.	ENSMUSG00000065216	ProperStrand	4	1	-18.8598
chr3	103699583	103699601	protein_coding	Ptpn22	intron	ENSMUSG00000027843	NonProperStrand	3	chr11	62416601	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-11.4760
chr7	150717298	150717336	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	chr1	129271757	129271816	snoRNA	ENSMUSG00000065687_snoU6-53	.	ENSMUSG00000065687	ProperStrand	78	1	-4.9967
chr17	56762639	56765994	protein_coding	Lonp1	exon	ENSMUSG00000041168	ProperStrand	83	chr1	172975120	172975189	tRNA	tRNA699-GlyGCC	.	318379	ProperStrand	660	1	-7.8677
chr2	181450622	181451208	protein_coding	Oprl1	exon	ENSMUSG00000027584	ProperStrand	32	chr4	131908810	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-3.9305
chr7	106627426	106627848	protein_coding	Rps3	utr3	ENSMUSG00000030744	ProperStrand	159	chr9	63868722	63868738	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	3	-15.0766
chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr7	150717298	150717350	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-0.8684
chr4	131399490	131399506	protein_coding	Mecr	exon	ENSMUSG00000028910	NonProperStrand	109	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.5265
chr11	50024057	50024147	protein_coding	Sqstm1	exon	ENSMUSG00000015837	ProperStrand	36	chr19	8799022	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-6.8445
chr1	133662549	133662565	protein_coding	Slc26a9	exon	ENSMUSG00000042268	NonProperStrand	5	chr5	121655016	121655078	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-8.7807
chr18	73693108	73693189	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr2	130101985	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	7	-1.9526
chr10	100006757	100006773	protein_coding	Cep290	intron	ENSMUSG00000019971	NonProperStrand	4	chr13	23831077	23831131	protein_coding	Hist1h1c	exon	ENSMUSG00000036181	ProperStrand	99	1	-17.9005
chr19	46805445	46805461	protein_coding	As3mt	intron	ENSMUSG00000003559	ProperStrand	10	chr5	35850779	35850795	protein_coding	Cpz	exon	ENSMUSG00000036596	ProperStrand	5	1	-19.5370
chr15	100406916	100406965	protein_coding	Pou6f1	utr3	ENSMUSG00000009739	ProperStrand	44	chr1	102076759	102076792	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	1	-10.0597
chr1	59741913	59742003	protein_coding	Nop58	utr5	ENSMUSG00000026020	ProperStrand	104	chr3	96132452	96132514	snRNA	ENSMUSG00000075978_U1	.	ENSMUSG00000075978	ProperStrand	132	5	-inf
chrX	12863264	12864422	protein_coding	Ddx3x	exon	ENSMUSG00000000787	ProperStrand	67	chr3	108357255	108357321	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-4.3295
chr16	32136151	32136231	LTR	RLTR17	ERVK	chr16RLTR1732135631	NonProperStrand	1	chr16	32136372	32136462	LTR	RMER3D-int	ERVK	chr16RMER3D-int32136322	ProperStrand	1	1	-inf
chr5	143811684	143811710	protein_coding	Rnf216	intron	ENSMUSG00000045078	ProperStrand	38	chr16	23110931	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.7634
chr10	87396467	87396483	protein_coding	Igf1	utr3	ENSMUSG00000020053	NonProperStrand	3	chr16	23111444	23111496	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-6.9982
chr19	8971586	8971676	protein_coding	Ints5	exon	ENSMUSG00000071652	ProperStrand	6	chr16	23110456	23110536	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-6.9463
chr2	32161562	32161596	protein_coding	Golga2	exon	ENSMUSG00000002546	ProperStrand	10	chr3	96364555	96364582	protein_coding	Txnip	utr3	ENSMUSG00000038393	ProperStrand	172	1	-14.8642
chr18	63908609	64112349	protein_coding	Wdr7	intron	ENSMUSG00000040560	NonProperStrand	180	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	2	-10.8611
chr8	125505708	125505728	protein_coding	Ankrd11	intron	ENSMUSG00000035569	ProperStrand	380	chr5	108336363	108336417	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-1.6171
chr4	43505815	43505872	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr11	117583705	117583750	protein_coding	Tnrc6c	exon	ENSMUSG00000025571	ProperStrand	51	1	-3.3649
chr5	34839193	34839286	protein_coding	Tnip2	utr3	ENSMUSG00000059866	ProperStrand	3	chr7	29136634	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-8.4253
chr18	73693085	73693190	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr11	69483134	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	24	-0.7078
chr3	41420180	41420247	protein_coding	Phf17	utr3	ENSMUSG00000025764	ProperStrand	101	chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	1	-7.7228
chr7	17019870	17019934	protein_coding	Zc3h4	exon	ENSMUSG00000059273	ProperStrand	95	chr8	46035762	46035779	protein_coding	Fat1	exon	ENSMUSG00000070047	ProperStrand	306	1	-9.1266
chr3	97817679	97851651	protein_coding	Notch2	exon	ENSMUSG00000027878	ProperStrand	86	chr6	89274613	89279397	protein_coding	Plxna1	exon	ENSMUSG00000030084	ProperStrand	233	1	-9.8699
chr14	25312642	25312667	protein_coding	Rps24	exon	ENSMUSG00000025290	ProperStrand	110	chr2	130103751	130103799	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	2	-11.6531
chrX	33525627	33525648	protein_coding	Dock11	intron	ENSMUSG00000031093	ProperStrand	42	chr12	112779226	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	2	-8.9689
chr14	105522485	105522592	protein_coding	Rbm26	intron	ENSMUSG00000022119	ProperStrand	60	chr11	97642952	97642982	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.4717
chr8	59992248	59992866	protein_coding	Hmgb2	exon	ENSMUSG00000054717	ProperStrand	184	chr5	130300527	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	5	-5.6279
chr2	129998643	129998663	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr11	97641529	97641575	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	2	-4.9641
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr16	23111695	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	22	-3.8892
chr1	33828651	33828669	protein_coding	Zfp451	intron	ENSMUSG00000042197	NonProperStrand	393	chr5	121655099	121655147	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-0.7807
chr19	7095413	7095467	protein_coding	Stip1	utr3	ENSMUSG00000024966	ProperStrand	100	chr3	10389576	10389592	protein_coding	Chmp4c	exon	ENSMUSG00000027536	ProperStrand	3	2	-inf
chr6	52965701	52965718	protein_coding	Jazf1	intron	ENSMUSG00000063568	ProperStrand	43	chr4	131908773	131908808	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.7076
chr10	80267333	80267409	protein_coding	Sf3a2	exon	ENSMUSG00000020211	ProperStrand	50	chr19	8963074	8963164	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-4.5490
chr18	10052130	10052151	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr15	75726271	75726348	protein_coding	Eef1d	exon	ENSMUSG00000055762	ProperStrand	99	3	-17.3155
chr5	116435813	116436651	protein_coding	Cit	exon	ENSMUSG00000029516	ProperStrand	45	chr8	129468783	129468863	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-4.9675
chr12	70413651	70415416	protein_coding	Nemf	exon	ENSMUSG00000020982	ProperStrand	77	chr17	35088956	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-5.3797
chr11	75375207	75375224	protein_coding	Slc43a2	intron	ENSMUSG00000038178	ProperStrand	45	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-7.7775
chr4	125863740	125863804	protein_coding	Thrap3	exon	ENSMUSG00000043962	ProperStrand	84	chr5	14252800	14252816	protein_coding	Sema3e	utr3	ENSMUSG00000063531	ProperStrand	125	1	-11.1632
chr11	102212794	102213789	protein_coding	Slc4a1	exon	ENSMUSG00000006574	ProperStrand	3	chr16	23110968	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-9.5778
chr12	88805515	88805542	protein_coding	Snw1	exon	ENSMUSG00000021039	ProperStrand	36	chr5	121655052	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.7185
chr5	30960274	30960364	protein_coding	4930471M23Rik	utr3	ENSMUSG00000029175	ProperStrand	67	chr7	117166761	117166841	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	8	-19.0779
chr2	180424252	180424342	protein_coding	Dido1	exon	ENSMUSG00000038914	ProperStrand	81	chr5	130300424	130300504	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.0102
chr4	133088664	133097082	protein_coding	Nudc	exon	ENSMUSG00000028851	ProperStrand	80	chr16	23111451	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-1.7944
chr5	135857995	135858011	protein_coding	Pom121	exon	ENSMUSG00000053293	NonProperStrand	94	chr16	23110526	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.7320
chr7	74878787	74878836	protein_coding	Synm	exon	ENSMUSG00000030554	ProperStrand	15	chr4	131866157	131866257	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-6.3678
chr1	108692643	108692685	protein_coding	Vps4b	intron	ENSMUSG00000009907	ProperStrand	29	chr16	23110967	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.1645
chr19	5842548	5842622	non_coding	Neat1	.	ENSMUSG00000092274	ProperStrand	63	chr2	26494708	26494755	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-5.2188
chr6	69657216	69657233	LTR	IAPEz-int	ERVK	chr6IAPEz-int69657165	NonProperStrand	42	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.3470
chr1	72642385	72642521	protein_coding	Smarcal1	exon	ENSMUSG00000039354	ProperStrand	23	chr11	68887042	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-6.0115
chr14	45949538	45949554	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	chr18	66624127	66624184	protein_coding	Pmaip1	utr3	ENSMUSG00000024521	ProperStrand	3	1	-16.3462
chr13	30338188	30338207	protein_coding	Mboat1	utr3	ENSMUSG00000038732	NonProperStrand	148	chr4	131865855	131865926	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.2780
chr8	13416897	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr7	16530922	16530938	protein_coding	Gltscr2	intron	ENSMUSG00000041560	NonProperStrand	3	1	-12.7981
chrX	20259628	20259686	protein_coding	Uba1	utr3	ENSMUSG00000001924	ProperStrand	156	chr19	8799054	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	2	-6.7033
chr6	148941089	148941107	protein_coding	Dennd5b	utr3	ENSMUSG00000030313	NonProperStrand	9	chr4	131865462	131865494	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-7.7817
chr18	35102288	35107603	protein_coding	Hspa9	exon	ENSMUSG00000024359	ProperStrand	166	chr16	23111377	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	7	-4.6606
chr4	47104821	47104843	protein_coding	Galnt12	utr5	ENSMUSG00000039774	ProperStrand	5	chr3	89750435	89750451	protein_coding	Atp8b2	exon	ENSMUSG00000060671	ProperStrand	140	1	-16.6894
chr5	108761730	108761747	protein_coding	Pigg	exon	ENSMUSG00000029263	ProperStrand	11	chr13	62644600	62644696	snoRNA	ENSMUSG00000075946_SNORA25	.	ENSMUSG00000075946	ProperStrand	11	2	-19.8343
chr4	148000802	148000878	protein_coding	Tardbp	utr5	ENSMUSG00000041459	ProperStrand	120	chr6	6510489	6528490	protein_coding	Shfm1	exon	ENSMUSG00000042541	ProperStrand	8	1	-16.0226
chr17	32957268	32957284	lincRNA	Gm16684	intron	ENSMUSG00000085948	ProperStrand	43	chr19	8963030	8963082	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.8490
chr11	116129693	116135241	protein_coding	Srp68	exon	ENSMUSG00000020780	ProperStrand	42	chr12	17552962	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	3	-13.4194
chr17	31991905	31991954	protein_coding	Sik1	exon	ENSMUSG00000024042	ProperStrand	55	chr1	88247814	88247876	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	2	-8.6526
chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	chr4	122970392	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-2.4821
chr2	155973318	155973408	protein_coding	Rbm39	utr3	ENSMUSG00000027620	ProperStrand	38	chr5	137813279	137813359	protein_coding	Ephb4	exon	ENSMUSG00000029710	ProperStrand	49	1	-14.6608
chr7	28146782	28146798	protein_coding	Spnb4	exon	ENSMUSG00000011751	NonProperStrand	84	chr11	98878368	98878458	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-5.6235
chr8	108758785	108758833	protein_coding	Prmt7	exon	ENSMUSG00000060098	ProperStrand	43	chr16	23110829	23110874	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-3.4814
chr2	90235290	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	88786420	88786437	protein_coding	Mtap	intron	ENSMUSG00000062937	ProperStrand	10	1	-8.0457
chr9	110842126	110845099	protein_coding	Tdgf1	utr3	ENSMUSG00000032494	ProperStrand	218	chr3	68889026	68889247	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	22	-inf
chr15	81866195	81867951	protein_coding	Xrcc6	exon	ENSMUSG00000022471	ProperStrand	34	chr6	71832562	71832652	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-6.7345
chr11	62366480	62366522	protein_coding	Ubb	exon	ENSMUSG00000019505	ProperStrand	32	chr1	162967490	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.6627
chr1	72673124	72673145	protein_coding	Smarcal1	exon	ENSMUSG00000039354	ProperStrand	23	chr9	15119629	15119758	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.3979
chr11	87794807	87794863	protein_coding	Dynll2	utr3	ENSMUSG00000020483	ProperStrand	22	chr17	35088957	35089025	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-7.8713
chr9	78023195	78023242	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr6	118625955	118626327	protein_coding	Cacna1c	exon	ENSMUSG00000051331	NonProperStrand	49	1	-6.2773
chr2	22444739	22444817	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	chr6	125136478	125136568	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	1	-1.4390
chr18	35716759	35716849	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	NonProperStrand	45	chr8	73419703	73419794	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	NonProperStrand	53	2	-20.1475
mmu-miR-1949	0	16	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr5	111121066	111121165	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	2	-3.1424
chr13	58278087	58278115	protein_coding	Ubqln1	utr3	ENSMUSG00000005312	ProperStrand	49	chr5	123622050	123622066	protein_coding	Hpd	exon	ENSMUSG00000029445	ProperStrand	254	1	-10.8284
chr4	44716322	44716338	protein_coding-noncoding	Pax5	utr3	ENSMUSG00000014030	ProperStrand	1	chr17	13115655	13115699	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	1	-inf
chr2	155479245	155479261	protein_coding	Trpc4ap	exon	ENSMUSG00000038324	ProperStrand	38	chr11	33060373	33060865	protein_coding	Npm1	exon	ENSMUSG00000057113	ProperStrand	352	1	-10.6896
chr14	64273392	64273409	protein_coding	Xkr6	intron	ENSMUSG00000035067	ProperStrand	10	chr9	120038468	120038536	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-6.5201
chr5	114292893	114292983	protein_coding	Coro1c	utr3	ENSMUSG00000004530	ProperStrand	44	chr4	21789170	21789250	protein_coding	Sfrs18	exon	ENSMUSG00000028248	ProperStrand	36	1	-14.9790
chr1	173943251	173943306	protein_coding	Vangl2	utr5	ENSMUSG00000026556	ProperStrand	37	chr18	80909380	80909396	protein_coding	Nfatc1	exon	ENSMUSG00000033016	ProperStrand	35	1	-15.3814
chr11	101304880	101306755	protein_coding	Rpl27	exon	ENSMUSG00000063316	ProperStrand	96	chr4	131908689	131908788	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	8	-9.6720
chr7	118219689	118219740	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	chr7	86611351	86611379	tRNA	tRNA387-ArgTCG	.	320887	ProperStrand	77	1	-3.7028
chr12	60238255	60238345	protein_coding	Ctage5	intron	ENSMUSG00000021000	ProperStrand	35	chr7	54443623	54443703	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-10.8164
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr16	35932620	35932636	protein_coding	Dtx3l	exon	ENSMUSG00000049502	ProperStrand	152	1	-2.7544
chr11	87794347	87794415	protein_coding	Dynll2	utr3	ENSMUSG00000020483	ProperStrand	22	chr2	158182201	158182291	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-6.9878
chr6	86474612	86474655	protein_coding	Pcbp1	utr3	ENSMUSG00000051695	ProperStrand	108	chr17	35088957	35089008	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	4	-14.8214
chr16	37384897	37384913	protein_coding	Stxbp5l	utr5	ENSMUSG00000022829	ProperStrand	332	chr14	56452163	56452212	protein_coding	Nfatc4	utr3	ENSMUSG00000023411	ProperStrand	16	1	-12.5718
chr2	58386456	58386474	protein_coding	Acvr1	intron	ENSMUSG00000026836	NonProperStrand	6	chr11	99086425	99089845	protein_coding	Smarce1	exon	ENSMUSG00000037935	ProperStrand	38	1	-18.2115
chr9	120039286	120039308	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	chr19	42341613	42341630	protein_coding	Golga7b	intron	ENSMUSG00000042532	ProperStrand	8	1	-13.6623
chr5	138741389	138741407	protein_coding	Stag3	exon	ENSMUSG00000036928	ProperStrand	53	chr7	29136536	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	4	-9.2685
chr2	124914706	124914743	protein_coding	Myef2	exon	ENSMUSG00000027201	ProperStrand	19	chr17	24857748	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	3	-10.7186
chr16	90386836	90386853	protein_coding	Hunk	exon	ENSMUSG00000053414	NonProperStrand	4	chr7	52975812	52976128	protein_coding	Rpl18	exon	ENSMUSG00000059070	NonProperStrand	2	1	-inf
chrX	98988498	98988549	antisense	Gm4779	.	ENSMUSG00000045010	ProperStrand	7	chr5	23151876	23151893	protein_coding	Srpk2	intron	ENSMUSG00000062604	NonProperStrand	38	1	-18.6519
chr17	80680562	80680607	protein_coding	Dhx57	exon	ENSMUSG00000035051	ProperStrand	20	chr7	116663640	116663746	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.5385
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr17	66798546	66798562	protein_coding	1110012J17Rik	exon	ENSMUSG00000052105	NonProperStrand	38	1	-10.2896
chr2	25133975	25134700	protein_coding	Anapc2	exon	ENSMUSG00000026965	ProperStrand	15	chr2	145077957	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-10.5332
chr1	162987683	162990896	protein_coding	Dars2	exon	ENSMUSG00000026709	ProperStrand	14	chr18	33954878	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	4	-19.9164
chr7	52713353	52714494	protein_coding	Ftl1	exon	ENSMUSG00000050708	ProperStrand	807	chr9	15119646	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	24	-19.4775
chr13	44980096	44980191	protein_coding	Jarid2	exon	ENSMUSG00000038518	ProperStrand	372	chr15	79913288	79913328	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-0.7483
chr7	27957427	27957517	protein_coding-noncoding	Rab4b	utr3	ENSMUSG00000053291	NonProperStrand	1	chr7	27957279	27957359	protein_coding	Rab4b	intron	ENSMUSG00000053291	NonProperStrand	2	1	-inf
chr9	83678800	83681879	protein_coding	Elovl4	exon	ENSMUSG00000032262	ProperStrand	159	chr4	131908689	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-2.6735
chr18	17114586	17114605	LINE	Lx7	L1	chr18Lx717113498	ProperStrand	1	chr15	85757443	85758379	protein_coding	Celsr1	exon	ENSMUSG00000016028	ProperStrand	56	1	-inf
chr5	115322978	115322994	protein_coding	4930519G04Rik	intron	ENSMUSG00000029564	ProperStrand	22	chr2	63936034	63936053	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-9.8854
chr19	47183008	47183077	protein_coding	Pdcd11	exon	ENSMUSG00000025047	ProperStrand	137	chr17	24300045	24300061	protein_coding	Amdhd2	exon	ENSMUSG00000036820	ProperStrand	11	1	-15.1345
chr7	116664898	116664928	protein_coding	Rpl27a	intron	ENSMUSG00000046364	ProperStrand	149	chr9	15119631	15119709	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.2081
chr10	93498941	93498958	protein_coding	Fgd6	utr5	ENSMUSG00000020021	ProperStrand	15	chr19	5493398	5493441	protein_coding	Cfl1	exon	ENSMUSG00000056201	ProperStrand	88	1	-15.3558
chr11	117152179	117152259	protein_coding	Sept9	exon	ENSMUSG00000059248	ProperStrand	60	chr7	116663675	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.5117
chr10	126470070	126470086	protein_coding	Fam119b	exon	ENSMUSG00000080115	ProperStrand	1	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr2	120349850	120349983	protein_coding	Zfp106	exon	ENSMUSG00000027288	ProperStrand	199	chrX	7444685	7444701	protein_coding	Otud5	exon	ENSMUSG00000031154	NonProperStrand	16	2	-19.5446
chr6	145564547	145564563	protein_coding	Tuba3b	utr5	ENSMUSG00000067338	ProperStrand	152	chr19	8963118	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-0.9158
chr2	71567742	71567808	protein_coding	Gm1631	intron	ENSMUSG00000064263	ProperStrand	1	chr12	112779195	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-inf
chr6	29481271	29481290	protein_coding	Irf5	exon	ENSMUSG00000029771	ProperStrand	2	chrX	103398771	103398824	protein_coding	Pgk1	utr3	ENSMUSG00000062070	ProperStrand	484	1	-16.6297
chr10	79606576	79606666	protein_coding	Atp5d	exon	ENSMUSG00000003072	ProperStrand	44	chrX	34622934	34623014	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-3.7412
chr5	34983547	34983647	protein_coding	Nop14	exon	ENSMUSG00000036693	ProperStrand	35	chr9	15119734	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.6006
chr16	18407341	18407383	protein_coding	Comt	utr3	ENSMUSG00000000326	ProperStrand	9	chr4	120725021	120725398	protein_coding	Col9a2	exon	ENSMUSG00000028626	ProperStrand	35	1	-18.0188
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr7	4691730	4691754	protein_coding	Suv420h2	utr5	ENSMUSG00000059851	NonProperStrand	70	1	-8.5308
chr1	75494711	75494759	protein_coding	Obsl1	exon	ENSMUSG00000026211	ProperStrand	23	chr16	23110852	23110942	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.7108
chr7	73180113	73183915	protein_coding	Pcsk6	exon	ENSMUSG00000030513	ProperStrand	32	chr7	148634708	148634788	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-5.1944
chr12	111862739	111862792	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr6	77195102	77195118	protein_coding	Lrrtm1	exon	ENSMUSG00000060780	ProperStrand	19	1	-10.8806
chr13	44827282	44918828	protein_coding	Jarid2	exon	ENSMUSG00000038518	ProperStrand	372	chr18	73693168	73693186	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-2.1735
chr15	100636685	100636701	protein_coding	Slc4a8	exon	ENSMUSG00000023032	ProperStrand	15	chr16	23111372	23111393	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.5828
chr11	69547752	69547794	protein_coding	Polr2a	utr3	ENSMUSG00000005198	ProperStrand	200	chr17	35089184	35089233	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	4	-10.8614
chr8	108233712	108233730	protein_coding	4933405L10Rik	exon	ENSMUSG00000013158	ProperStrand	94	chr16	23111772	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.2385
chr9	70247420	70247504	protein_coding	Myo1e	utr3	ENSMUSG00000032220	ProperStrand	36	chr16	23111777	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.7618
chr10	23506278	23506344	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	chr2	144091716	144091932	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	ProperStrand	549	2	-4.7725
chr2	146125209	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	chr2	158182156	158182242	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	4	-10.0784
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr5	23940662	23940678	protein_coding	Slc4a2	exon	ENSMUSG00000028962	NonProperStrand	4	1	-17.0390
chr5	98577277	98577357	LINE	L1M3	L1	chr5L1M398577272	NonProperStrand	1	chr5	98577147	98577237	SINE	ID4_	ID	chr5ID4_98577155	NonProperStrand	1	1	-inf
chr17	35299949	35299978	protein_coding	Prrc2a	utr5	ENSMUSG00000024393	ProperStrand	315	chr11	62416630	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-2.1434
chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	chr2	158451026	158451043	protein_coding	Actr5	exon	ENSMUSG00000037761	NonProperStrand	94	1	-8.4983
chr1	88252837	88252864	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	chr9	64024466	64024524	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	1	-2.0461
chr5	77738902	77738918	protein_coding	Noa1	exon	ENSMUSG00000036285	ProperStrand	147	chr18	35716684	35716786	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-0.8797
chr11	94188662	94188686	Simple_repeat	(CCCCG)n	Simple_repeat	chr11(CCCCG)n94188658	NonProperStrand	10	chr14	51427118	51427208	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	8	-20.7115
chr4	133416735	133416777	protein_coding	Rps6ka1	exon	ENSMUSG00000003644	ProperStrand	68	chr4	131908753	131908797	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.0584
chr3	121462207	121462297	protein_coding	Abcd3	utr3	ENSMUSG00000028127	ProperStrand	10	chr9	99406114	99420948	protein_coding	Armc8	exon	ENSMUSG00000032468	ProperStrand	15	1	-20.6736
chr14	61113419	61113436	LINE	L1MB3	L1	chr14L1MB361113375	NonProperStrand	72	chr17	23818690	23818733	protein_coding	Cldn6	utr3	ENSMUSG00000023906	ProperStrand	74	1	-12.5253
chr1	157137649	157137674	protein_coding	Xpr1	intron	ENSMUSG00000026469	ProperStrand	15	chr18	33954821	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-10.1387
chr9	40611211	40611242	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr1	88247741	88247799	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	3	-2.6522
chr4	135810465	135810482	protein_coding	Tcea3	exon	ENSMUSG00000001604	ProperStrand	3	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr7	135019298	135019341	protein_coding	Zfp668	utr5	ENSMUSG00000049728	ProperStrand	7	chr4	131908236	131908298	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-8.9603
chr15	100064274	100064374	protein_coding	Atf1	intron	ENSMUSG00000023027	ProperStrand	19	chr16	23111383	23111449	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.1411
chr17	39979941	39979988	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr3	128003741	128003758	SINE	B4A	B4	chr3B4A128003488	NonProperStrand	5	1	-12.3744
chr6	115561806	115561889	protein_coding	Mkrn2	exon	ENSMUSG00000000439	ProperStrand	60	chr7	116664871	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.5488
chr14	47948933	47948949	LTR	RMER17A2	ERVK	chr14RMER17A247948307	NonProperStrand	43	chr4	131865866	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.3073
chr14	68742304	68742321	protein_coding	Nefm	exon	ENSMUSG00000022054	ProperStrand	10	chr18	35102297	35102350	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-10.2322
chr6	122679896	122687235	protein_coding	Slc2a3	exon	ENSMUSG00000003153	ProperStrand	682	chr9	120038552	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	23	-19.9728
chr11	100338532	100338632	protein_coding	Acly	utr3	ENSMUSG00000020917	ProperStrand	183	chr7	117190023	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-1.4754
chr15	97897282	97906245	protein_coding	Senp1	exon	ENSMUSG00000033075	ProperStrand	24	chr16	23111392	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.7195
chr4	118966408	118966822	protein_coding	Ybx1	exon	ENSMUSG00000028639	NonProperStrand	2	chr7	148634774	148634837	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-11.3325
chr8	79127668	79127686	LTR	LTR69	ERVL	chr8LTR6979127556	NonProperStrand	9	chr11	97643006	97643080	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-6.0986
chr4	55431652	55431668	lincRNA	Gm12505	exon	ENSMUSG00000087070	ProperStrand	447	chr2	128486586	128489623	protein_coding	Anapc1	exon	ENSMUSG00000014355	ProperStrand	38	1	-10.2121
chr12	104317206	104317223	protein_coding	Unc79	exon	ENSMUSG00000021198	ProperStrand	99	chr16	14138785	14138833	protein_coding	4921513D23Rik	intron	ENSMUSG00000060657	ProperStrand	47	1	-12.8017
chr1	173433177	173433225	protein_coding	B930036N10Rik	utr3	ENSMUSG00000091993	ProperStrand	150	chr7	52381973	52382017	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-4.9194
chr17	35971987	35972018	protein_coding	Tubb5	exon	ENSMUSG00000001525	ProperStrand	624	chr14	124243064	124243084	protein_coding	Itgbl1	exon	ENSMUSG00000032925	ProperStrand	159	1	-6.6892
chr11	121149362	121152078	protein_coding	Foxk2	exon	ENSMUSG00000039275	ProperStrand	38	chr1	162965989	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-4.4652
chr6	142777350	142777367	protein_coding	St8sia1	utr3	ENSMUSG00000030283	ProperStrand	42	chr7	38468013	38468035	protein_coding	Zfp536	intron	ENSMUSG00000043456	ProperStrand	57	1	-14.1318
chr14	21343401	21343467	protein_coding	Ppp3cb	intron	ENSMUSG00000021816	ProperStrand	17	chr19	8799833	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-7.4535
chr3	101385157	101394530	protein_coding	Atp1a1	exon	ENSMUSG00000033161	ProperStrand	316	chr4	131908689	131908799	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	13	-6.1862
chr11	116463518	116463605	protein_coding	Rhbdf2	exon	ENSMUSG00000020806	ProperStrand	20	chr11	69483190	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.4692
chr9	40611685	40611739	snoRNA	ENSMUSG00000075876_Snord14c	.	ENSMUSG00000075876	ProperStrand	104	chr4	3762227	3762290	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	2	-13.3461
chr8	67110145	67110163	protein_coding	Cpe	intron	ENSMUSG00000037852	NonProperStrand	5	chr19	8799022	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-10.9603
chr1	71672685	71672794	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr17	27236036	27236052	protein_coding	Itpr3	exon	ENSMUSG00000042644	ProperStrand	137	1	-6.1968
chr4	131399489	131399506	protein_coding	Mecr	exon	ENSMUSG00000028910	NonProperStrand	109	chrX	34622906	34622991	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	3	-5.8055
chr14	46263783	46263821	protein_coding	Ddhd1	intron	ENSMUSG00000037697	ProperStrand	2	chr7	148634702	148634792	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-11.3325
chrX	130758598	130758617	protein_coding	Trmt2b	utr3	ENSMUSG00000067369	ProperStrand	5	chr4	131908236	131908345	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-19.4485
chr6	127837066	127837083	LTR	MTEa	MaLR	chr6MTEa127836769	ProperStrand	9	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-12.4764
chr1	136456855	136527057	protein_coding	Kdm5b	utr5	ENSMUSG00000042207	ProperStrand	223	chr10	23505152	23505236	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-0.9973
chr16	13835532	13835594	protein_coding	Pdxdc1	intron	ENSMUSG00000022680	ProperStrand	26	chr1	153602594	153602610	protein_coding	Edem3	utr5	ENSMUSG00000043019	ProperStrand	84	2	-inf
chrX	70237450	70237471	miRNA	Mir2137	.	ENSMUSG00000089357	ProperStrand	50	chr18	33954882	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-6.4930
chr2	164651094	164651152	protein_coding	Zswim1	exon	ENSMUSG00000017764	ProperStrand	68	chr10	79282810	79282828	protein_coding	Palm	utr3	ENSMUSG00000035863	NonProperStrand	3	1	-19.6187
chr13	68759738	68764669	protein_coding	Adcy2	exon	ENSMUSG00000021536	ProperStrand	237	chr1	88248596	88248662	snoRNA	ENSMUSG00000064696_SNORD20	.	ENSMUSG00000064696	ProperStrand	89	1	-9.7671
chr12	87861885	87861936	protein_coding	Esrrb	utr3	ENSMUSG00000021255	ProperStrand	254	chr9	15119677	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	7	-7.3264
chr6	70794802	70794820	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chr9	29012576	29012593	protein_coding	Ntm	intron	ENSMUSG00000059974	NonProperStrand	27	1	-13.0359
chr6	107738191	107738208	Other	RMER1B	Other	chr6RMER1B107738112	ProperStrand	29	chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-7.9068
chr14	58318475	58318575	protein_coding	Lats2	exon	ENSMUSG00000021959	ProperStrand	1	chr4	131908689	131908744	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-inf
chr4	40932054	40932075	protein_coding	Nfx1	exon	ENSMUSG00000028423	ProperStrand	39	chr9	111102230	111102330	protein_coding	Lrrfip2	exon	ENSMUSG00000032497	ProperStrand	28	1	-15.7049
chr11	95247926	95249109	protein_coding	Slc35b1	exon	ENSMUSG00000020873	ProperStrand	2	chr10	23505152	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-8.0476
chr14	8782845	8782912	protein_coding	Flnb	exon	ENSMUSG00000025278	ProperStrand	124	chr17	13112490	13112527	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-3.2250
chr7	19511452	19527603	protein_coding	Nova2	exon	ENSMUSG00000030411	ProperStrand	23	chr16	23110910	23110963	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.4133
chr17	28036913	28036958	protein_coding	Uhrf1bp1	utr3	ENSMUSG00000039512	ProperStrand	79	chr18	35716764	35716854	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	6	-11.3113
chr16	4483091	4483171	protein_coding	Srl	exon	ENSMUSG00000022519	ProperStrand	8	chr11	119142034	119142124	protein_coding	Gaa	intron	ENSMUSG00000025579	ProperStrand	149	1	-15.5940
chr6	117875358	117875389	protein_coding	Hnrnpf	utr3	ENSMUSG00000042079	ProperStrand	147	chr7	52381719	52381799	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-5.8034
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	68067261	68067277	protein_coding	Ntn1	intron	ENSMUSG00000020902	NonProperStrand	194	1	-2.3374
chr15	84101747	84103941	protein_coding	Parvb	exon	ENSMUSG00000022438	ProperStrand	127	chr5	122278538	122278589	protein_coding	Sh2b3	exon	ENSMUSG00000042594	ProperStrand	7	1	-16.2671
chr13	100205221	100205321	protein_coding	Mtap1b	exon	ENSMUSG00000052727	ProperStrand	76	chr1	162965996	162966028	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-3.1713
chr6	119423024	119423041	protein_coding	Wnt5b	intron	ENSMUSG00000030170	NonProperStrand	3	chr4	131908809	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-6.9471
chr6	85396256	85396349	protein_coding	Smyd5	utr3	ENSMUSG00000033706	NonProperStrand	30	chr16	23110966	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-6.7134
chr5	89383967	89457318	protein_coding	Slc4a4	exon	ENSMUSG00000060961	NonProperStrand	195	chr15	79908972	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-3.2442
chr2	51965881	51965976	protein_coding	Rif1	exon	ENSMUSG00000036202	ProperStrand	201	chr15	79908929	79908983	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-3.1896
chr9	64024930	64024987	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	chr14	76247731	76247821	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-0.8070
chr9	47447468	47447490	protein_coding	Cadm1	intron	ENSMUSG00000032076	NonProperStrand	8	chr7	134934814	134934856	protein_coding	Setd1a	exon	ENSMUSG00000042308	ProperStrand	58	1	-17.4640
chr4	41045039	41045088	protein_coding	Aqp3	exon	ENSMUSG00000028435	ProperStrand	14	chr2	32069862	32069879	protein_coding	Prrc2b	exon	ENSMUSG00000039262	ProperStrand	344	1	-12.7771
chr18	35063818	35063918	protein_coding	Etf1	utr3	ENSMUSG00000024360	ProperStrand	74	chr19	8800085	8800147	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-7.1904
chr7	19590786	19590802	protein_coding	Irf2bp1	exon	ENSMUSG00000044030	ProperStrand	16	chr1	59761635	59761716	snoRNA	ENSMUSG00000089093_Snord11	.	ENSMUSG00000089093	ProperStrand	193	1	-13.6602
chr3	123210870	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	chr11	106874194	106874213	tRNA	tRNA945-ArgCCG	.	90186	ProperStrand	133	1	-0.9235
chr4	132383615	132383631	protein_coding	Ppp1r8	utr3	ENSMUSG00000028882	ProperStrand	13	chr7	52382010	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-9.8076
chr7	52382603	52382914	protein_coding	Rpl13a	exon	ENSMUSG00000074129	ProperStrand	269	chr7	148634712	148634792	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-1.4315
chr17	23870667	23870705	protein_coding	Pkmyt1	intron	ENSMUSG00000023908	ProperStrand	9	chr4	131908686	131908787	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.5343
chr4	132283821	132283906	protein_coding	Xkr8	exon	ENSMUSG00000037752	ProperStrand	6	chr5	121655017	121655107	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-8.3778
chr19	40639338	40639354	protein_coding	Aldh18a1	exon	ENSMUSG00000025007	NonProperStrand	6	chr7	117189932	117189972	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-7.9273
chr9	70301395	70301456	protein_coding	Rnf111	exon	ENSMUSG00000032217	ProperStrand	33	chr17	24856662	24856752	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-7.6193
chr12	101378288	101378333	protein_coding	BC002230	exon	ENSMUSG00000021179	ProperStrand	37	chr11	62418016	62418086	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	3	-14.8854
mmu-miR-6240	1	25	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr7	116663633	116663770	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	22	-1.4232
chr18	87170689	87170709	LINE	Lx7	L1	chr18Lx787170587	ProperStrand	1	chr14	31827477	31827521	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-inf
chr8	108402906	108402959	protein_coding	Nutf2	utr3	ENSMUSG00000008450	ProperStrand	39	chr11	48616661	48616706	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	2	-16.0563
chr2	130104012	130104634	protein_coding	Nop56	exon	ENSMUSG00000027405	ProperStrand	125	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.7766
chr17	48015608	48015633	protein_coding	Foxp4	exon	ENSMUSG00000023991	ProperStrand	27	chr7	116663634	116663724	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.9611
chr11	89388470	89388490	protein_coding	Ankfn1	intron	ENSMUSG00000047773	ProperStrand	9	chr9	64143736	64143836	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-11.6508
chr5	108523236	108528180	protein_coding	Mtf2	exon	ENSMUSG00000029267	ProperStrand	39	chr10	23506278	23506321	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	3	-17.4025
chr4	43505656	43505874	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr7	54106414	54107266	protein_coding	Ldha	exon	ENSMUSG00000063229	ProperStrand	280	21	-inf
chr1	135948522	135948539	LTR	ORR1E	MaLR	chr1ORR1E135948426	NonProperStrand	1	chr11	96800575	96800622	protein_coding	Pnpo	exon	ENSMUSG00000018659	ProperStrand	7	1	-inf
chr6	67221203	67221293	protein_coding	Serbp1	exon	ENSMUSG00000036371	ProperStrand	261	chr7	117189864	117189944	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-3.3997
chr2	27281841	27281857	protein_coding	Vav2	exon	ENSMUSG00000009621	NonProperStrand	31	chr4	138867205	138867223	protein_coding	Akr7a5	intron	ENSMUSG00000028743	ProperStrand	22	1	-16.6538
chr6	91214752	91215723	protein_coding	Fbln2	exon	ENSMUSG00000064080	ProperStrand	12	chr9	15119331	15119411	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-8.3367
chr2	35037904	35037939	protein_coding	Rab14	utr3	ENSMUSG00000026878	ProperStrand	21	chr12	17552949	17553061	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	3	-16.2979
chr19	32190930	32190948	LINE	Lx8	L1	chr19Lx832190736	NonProperStrand	1	chr3	68889086	68889202	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-inf
chr2	179993685	179993701	protein_coding	Cables2	utr3	ENSMUSG00000038990	ProperStrand	9	chr19	8963086	8963179	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.8692
chr1	71652477	71652567	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr10	80641623	80641891	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-1.2350
chr11	86847662	86847684	protein_coding	Gdpd1	utr3	ENSMUSG00000061666	ProperStrand	5	chr12	60141442	60141507	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-11.9762
chr8	24352785	24352805	protein_coding	Golga7	utr3	ENSMUSG00000015341	ProperStrand	36	chr2	32818849	32818918	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	2	-10.4987
chr8	82229433	82229487	protein_coding	Abce1	intron	ENSMUSG00000058355	ProperStrand	66	chr16	23111485	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-5.0938
chr7	36529469	36529485	protein_coding	Dpy19l3	intron	ENSMUSG00000043671	NonProperStrand	7	chr18	75979993	75980012	protein_coding	Zbtb7c	utr5	ENSMUSG00000044646	ProperStrand	64	1	-17.4896
chr5	3693225	3693241	protein_coding	Ankib1	exon	ENSMUSG00000040351	NonProperStrand	98	chr1	3661500	3661517	protein_coding	Xkr4	utr5	ENSMUSG00000051951	ProperStrand	59	1	-12.3606
chr11	68716818	68717897	protein_coding	Rpl26	exon	ENSMUSG00000060938	ProperStrand	130	chr11	69483136	69483184	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.2505
chr10	79007872	79007934	protein_coding	Mier2	exon	ENSMUSG00000042570	ProperStrand	10	chr15	34370545	34370623	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-11.5258
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr4	140121137	140121153	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	1	-6.9759
chr2	118611946	118611962	protein_coding	Disp2	exon	ENSMUSG00000040035	NonProperStrand	204	chr9	44143126	44143199	protein_coding	H2afx	exon	ENSMUSG00000049932	ProperStrand	137	1	-9.2034
chr11	22418518	22418550	protein_coding	Tmem17	exon	ENSMUSG00000049904	ProperStrand	3	chr18	35716768	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-13.9285
chr11	83085127	83085203	snRNA	ENSMUSG00000064856_U2	.	ENSMUSG00000064856	ProperStrand	34	chr16	23110918	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-3.0056
chr7	116663714	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	chr6	70805437	70805524	snoRNA	ENSMUSG00000065750_SNORA5	.	ENSMUSG00000065750	ProperStrand	165	3	-3.1667
chr11	69466501	69466591	protein_coding	Fxr2	utr3	ENSMUSG00000018765	ProperStrand	40	chr17	24857725	24857835	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	9	-19.6793
chr14	35124376	35124407	protein_coding	Glud1	exon	ENSMUSG00000021794	ProperStrand	72	chrX	34622906	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	3	-7.3358
chr7	117604688	117604711	protein_coding	Sbf2	exon	ENSMUSG00000038371	ProperStrand	17	chrX	149934765	149934848	protein_coding	Ubqln2	exon	ENSMUSG00000050148	ProperStrand	12	1	-19.1709
chr3	100369431	100369447	protein_coding	Man1a2	utr3	ENSMUSG00000008763	NonProperStrand	28	chr3	108357359	108357390	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-6.0293
chr7	151621837	151621895	protein_coding	Cttn	utr3	ENSMUSG00000031078	ProperStrand	33	chr12	17552950	17553040	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	7	-19.6500
chr17	35971895	35971985	protein_coding	Tubb5	utr3	ENSMUSG00000001525	ProperStrand	624	chr6	142211245	142214830	protein_coding	Slco1a5	exon	ENSMUSG00000063975	NonProperStrand	38	1	-9.5465
chr2	26076538	26077744	protein_coding	Qsox2	exon	ENSMUSG00000036327	ProperStrand	24	chr7	116664872	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-4.2269
chr19	16077366	16077456	lincRNA	C130060C02Rik	intron	ENSMUSG00000087529	ProperStrand	1	chr8	81645832	81645922	protein_coding	Zfp827	intron	ENSMUSG00000071064	NonProperStrand	28	1	-inf
chr5	147646080	147646578	protein_coding	Rpl21	exon	ENSMUSG00000041453	ProperStrand	112	chr1	162968212	162968272	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	2	-9.1261
chr3	89856125	89856146	protein_coding	4933434E20Rik	intron	ENSMUSG00000027942	ProperStrand	19	chr4	131865855	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.7782
chr4	126700702	126700748	protein_coding	Sfpq	exon	ENSMUSG00000028820	ProperStrand	340	chr7	52382234	52382314	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	7	-20.2635
chrX	131140081	131140171	protein_coding	Hnrnph2	exon	ENSMUSG00000045427	ProperStrand	111	chr7	116664794	116664874	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.5583
chr7	28146782	28146798	protein_coding	Spnb4	exon	ENSMUSG00000011751	NonProperStrand	84	chr10	86155038	86155145	protein_coding	Hsp90b1	exon	ENSMUSG00000020048	ProperStrand	396	1	-8.8591
chr2	165653964	165654046	protein_coding	Zmynd8	exon	ENSMUSG00000039671	ProperStrand	81	chr12	106269338	106269428	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-3.5795
chr4	83195624	83195640	protein_coding	4930473A06Rik	exon	ENSMUSG00000052407	ProperStrand	19	chr11	106362637	106362674	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-9.7254
chr2	87499747	87499827	SINE	B1_Mus2	Alu	chr2B1_Mus287499662	ProperStrand	1	chr5	145848373	145848463	protein_coding	Arpc1a	intron	ENSMUSG00000029621	ProperStrand	19	1	-inf
chr4	55403979	55404009	protein_coding	Rad23b	utr3	ENSMUSG00000028426	ProperStrand	86	chr1	89681289	89681379	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-4.7435
chr18	52928577	52928594	protein_coding	Sncaip	intron	ENSMUSG00000024534	NonProperStrand	16	chr16	23110828	23110875	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.9771
chr7	52378288	52378582	protein_coding	Rps11	exon	ENSMUSG00000003429	ProperStrand	49	chr17	45705489	45705827	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	2	-11.4735
chr3	132117867	132117888	LINE	Lx4B	L1	chr3Lx4B132117792	ProperStrand	1	chr7	116664796	116664886	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-inf
chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	chr10	23505603	23505627	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-3.8419
chr4	46499767	46499784	SINE	ID_B1	B4	chr4ID_B146499735	ProperStrand	33	chr15	34370603	34370682	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-4.6811
chr10	75504790	75504853	protein_coding	Zfp280b	utr3	ENSMUSG00000049764	ProperStrand	25	chr3	108357264	108357354	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-6.2553
chr9	57793253	57793269	protein_coding	Sema7a	intron	ENSMUSG00000038264	NonProperStrand	13	chr8	73223056	73223074	protein_coding	Jund	exon	ENSMUSG00000071076	ProperStrand	50	1	-16.7439
chr17	34021920	34022831	protein_coding	Kifc1	exon	ENSMUSG00000079553	ProperStrand	47	chr1	162965572	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.7261
chr17	48773001	48773018	LINE	Lx9	L1	chr17Lx948772908	NonProperStrand	4	chr4	56910496	56910586	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	4	-inf
chr13	9833560	9833661	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr9	15118546	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	1	-1.4713
chr10	79612519	79612581	protein_coding	Midn	utr5	ENSMUSG00000035621	ProperStrand	36	chr16	23111443	23111500	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.0295
chr3	36933527	36933544	protein_coding	4932438A13Rik	exon	ENSMUSG00000037270	ProperStrand	96	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.8099
chr7	13516166	13516205	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr11	4820972	4820990	protein_coding	Thoc5	intron	ENSMUSG00000034274	ProperStrand	325	1	-5.3288
chr5	77445224	77445240	protein_coding	1700023E05Rik	exon	ENSMUSG00000029248	ProperStrand	1	chr18	33954826	33954911	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-inf
chr1	181891338	181929502	protein_coding	Cdc42bpa	exon	ENSMUSG00000026490	ProperStrand	24	chr11	97643010	97643090	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.1417
chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	chr4	116827119	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-3.9084
chrX	7493721	7493739	LTR	MLT1F1	MaLR	chrXMLT1F17493536	ProperStrand	1	chr3	123210956	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-inf
chr16	18283302	18283319	protein_coding	Dgcr8	exon	ENSMUSG00000022718	ProperStrand	67	chr8	96826008	96826075	protein_coding	Nup93	exon	ENSMUSG00000032939	ProperStrand	43	1	-13.7627
chr6	85414786	85414876	protein_coding	Cct7	exon	ENSMUSG00000030007	ProperStrand	173	chr12	112779148	112779228	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-2.8151
chr1	5905039	5905057	protein_coding	Npbwr1	utr3	ENSMUSG00000033774	NonProperStrand	1	chr1	162965531	162965549	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-inf
chr9	21242905	21242922	protein_coding	Dnm2	intron	ENSMUSG00000033335	ProperStrand	48	chr9	64143735	64143798	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-8.2189
chr1	180885279	180885295	protein_coding	Smyd3	utr3	ENSMUSG00000055067	NonProperStrand	190	chr2	145076803	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-5.4500
chr10	41644311	41644329	protein_coding	Armc2	exon	ENSMUSG00000071324	ProperStrand	281	chr1	162966812	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-3.3116
chrX	123488272	123488290	Other	RMER1B	Other	chrXRMER1B123488113	ProperStrand	1	chr12	70413651	70415416	protein_coding	Nemf	exon	ENSMUSG00000020982	ProperStrand	77	1	-inf
chr16	20692898	20692920	protein_coding	Eif4g1	utr3	ENSMUSG00000045983	ProperStrand	199	chr4	116862619	116862663	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	1	-6.4599
chr5	34112034	34112050	protein_coding	Letm1	exon	ENSMUSG00000005299	NonProperStrand	145	chr1	155094251	155094427	protein_coding	Lamc1	exon	ENSMUSG00000026478	ProperStrand	239	1	-8.7743
chr16	13533925	13533941	SINE	B4A	B4	chr16B4A13533757	ProperStrand	2	chr15	101919122	101919171	protein_coding	Eif4b	exon	ENSMUSG00000058655	ProperStrand	484	1	-16.6297
chr2	34629726	34629816	protein_coding	Hspa5	exon	ENSMUSG00000026864	ProperStrand	181	chr8	32260360	32260440	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-2.6041
chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	chr14	31827479	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-2.1281
chr7	151765212	151765228	antisense	Gm10574	.	ENSMUSG00000073778	ProperStrand	357	chr4	133189093	133189124	protein_coding	Zdhhc18	exon	ENSMUSG00000037553	ProperStrand	51	1	-10.0675
chr14	66475591	66475669	protein_coding	Ccdc25	exon	ENSMUSG00000022035	ProperStrand	15	chr15	79913288	79913346	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	6	-inf
chr15	35729388	35729465	protein_coding	Vps13b	intron	ENSMUSG00000037646	ProperStrand	56	chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	1	-11.5734
chr1	136527180	136527269	protein_coding	Kdm5b	exon	ENSMUSG00000042207	ProperStrand	223	chr18	35714194	35714261	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-1.2819
chr10	21718029	21718529	protein_coding	Sgk1	exon	ENSMUSG00000019970	ProperStrand	55	chr8	73419743	73419775	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.2879
chr2	25440450	25440846	protein_coding	B230208H17Rik	exon	ENSMUSG00000015087	ProperStrand	25	chr7	29136581	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	5	-16.5868
chr8	77742628	77742644	protein_coding	Rasd2	exon	ENSMUSG00000034472	ProperStrand	18	chr4	131866642	131866676	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	1	-11.5462
chr17	46814084	46814100	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr15	55084235	55084251	protein_coding	Deptor	utr3	ENSMUSG00000022419	ProperStrand	17	1	-11.7900
chr17	71990923	71990982	snoRNA	ENSMUSG00000092713_CT010429.1	.	ENSMUSG00000092713	ProperStrand	182	chr1	172975151	172975189	tRNA	tRNA699-GlyGCC	.	1479416	ProperStrand	660	1	-6.3130
chr8	11781158	11782543	protein_coding	Arhgef7	exon	ENSMUSG00000031511	ProperStrand	38	chr19	8799825	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-5.8399
chr11	23474667	23474722	protein_coding	0610010F05Rik	utr3	ENSMUSG00000042208	ProperStrand	6	chr7	30796757	30796790	protein_coding	Zfp568	intron	ENSMUSG00000074221	ProperStrand	110	1	-16.8546
chr7	148444003	148444073	protein_coding	Phrf1	exon	ENSMUSG00000038611	ProperStrand	86	chr7	106631294	106631353	snoRNA	ENSMUSG00000065822_Snord15a	.	ENSMUSG00000065822	ProperStrand	128	2	-17.3284
chr2	11602046	11603567	protein_coding	Il2ra	exon	ENSMUSG00000026770	ProperStrand	17	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-10.2914
chr19	4801819	4801919	protein_coding	Rbm14	intron	ENSMUSG00000006456	ProperStrand	84	chr7	148634776	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-3.3626
chr7	30041789	30043188	protein_coding	Spint2	exon	ENSMUSG00000074227	ProperStrand	82	chr1	162968245	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-6.1990
chr11	82692475	82692491	protein_coding	Rad51l3	exon	ENSMUSG00000018841	ProperStrand	112	chr15	79908931	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-4.2709
chr6	118473552	118473587	protein_coding	Ankrd26	utr3	ENSMUSG00000007827	ProperStrand	8	chr4	117881847	117881942	protein_coding	Ptprf	utr3	ENSMUSG00000033295	ProperStrand	337	1	-13.9951
chr9	59513114	59523414	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr17	13115665	13115783	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	2	-3.3084
chr10	62052585	62052663	protein_coding	Ddx21	exon	ENSMUSG00000020075	ProperStrand	137	chr17	35087895	35087946	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-3.6319
chr5	144168907	144168928	protein_coding	Kdelr2	intron	ENSMUSG00000079111	ProperStrand	25	chr16	23111386	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-4.6757
chr12	29338074	29338122	protein_coding	Rnaseh1	intron	ENSMUSG00000020630	ProperStrand	3	chr16	23111373	23111478	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-inf
chr10	127094207	127094224	protein_coding	Stat6	exon	ENSMUSG00000002147	NonProperStrand	9	chr4	131908720	131908750	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.5343
chr14	61113419	61113436	LINE	L1MB3	L1	chr14L1MB361113375	NonProperStrand	72	chr11	69483136	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.1448
chr13	101541067	101541088	protein_coding	Cenph	intron	ENSMUSG00000045273	NonProperStrand	45	chr9	120038573	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-6.0659
chr9	20702993	20703009	protein_coding	Eif3g	utr5	ENSMUSG00000070319	ProperStrand	38	chr4	131908686	131908798	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-5.3463
chr12	87860471	87860508	protein_coding	Esrrb	utr3	ENSMUSG00000021255	ProperStrand	254	chr7	108971290	108971306	protein_coding	Inppl1	utr3	ENSMUSG00000032737	ProperStrand	272	1	-7.4026
chr12	55835610	55835700	snRNA	ENSMUSG00000075960_U1	.	ENSMUSG00000075960	ProperStrand	210	chr3	123210913	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-1.0050
chr4	40147330	40147347	LINE	L1MB1	L1	chr4L1MB140146060	ProperStrand	7	chr8	87568993	87569139	protein_coding	Tnpo2	exon	ENSMUSG00000031691	ProperStrand	92	1	-16.8850
chr7	28154412	28154512	protein_coding	Spnb4	exon	ENSMUSG00000011751	ProperStrand	39	chr9	15119736	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-5.8206
chr18	56907741	56909370	protein_coding	Lmnb1	exon	ENSMUSG00000024590	ProperStrand	176	chr12	77655844	77655865	protein_coding	Plekhg3	intron	ENSMUSG00000052609	NonProperStrand	3	2	-inf
chr5	29068858	29068948	lincRNA	9530036O11Rik	intron	ENSMUSG00000086663	NonProperStrand	6	chr5	29590064	29590154	protein_coding	Lmbr1	intron	ENSMUSG00000010721	NonProperStrand	4	1	-19.3129
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chrX	34667269	34667285	protein_coding	Nkap	exon	ENSMUSG00000016409	NonProperStrand	133	1	-6.2175
chr6	122678312	122678412	protein_coding	Slc2a3	utr3	ENSMUSG00000003153	ProperStrand	682	chr7	134023616	134023651	protein_coding	Taok2	exon	ENSMUSG00000059981	ProperStrand	47	1	-8.9411
chr8	3618617	3618663	protein_coding	Xab2	exon	ENSMUSG00000019470	ProperStrand	52	chr3	123210854	123210918	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.3028
chr9	21017062	21017139	protein_coding	Pde4a	utr3	ENSMUSG00000032177	ProperStrand	11	chr2	26493383	26493483	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-7.0863
chr11	116535953	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr14	31827269	31827356	protein_coding	Gnl3	exon	ENSMUSG00000042354	ProperStrand	53	1	-6.1551
chr1	193175203	193175293	SINE	B2_Mm1a	B2	chr1B2_Mm1a193175175	ProperStrand	1	chr11	69281946	69282036	protein_coding	Dnahc2	intron	ENSMUSG00000005237	ProperStrand	95	1	-inf
chr5	24043094	24043111	protein_coding	Asb10	intron	ENSMUSG00000038204	NonProperStrand	2	chr7	51505224	51505266	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	1	-15.6165
chr8	72728455	72728502	protein_coding	Slc25a42	intron	ENSMUSG00000002346	ProperStrand	9	chr2	117086106	117086133	protein_coding	Fam98b	intron	ENSMUSG00000027349	ProperStrand	3	1	-inf
chr1	92689614	92689630	protein_coding	Col6a3	exon	ENSMUSG00000048126	ProperStrand	79	chr4	131908689	131908750	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.8739
chr3	89147629	89147684	protein_coding	Adam15	exon	ENSMUSG00000028041	ProperStrand	40	chr5	123622050	123622066	protein_coding	Hpd	exon	ENSMUSG00000029445	ProperStrand	254	1	-11.2379
chr8	113413594	113414129	protein_coding	Fuk	exon	ENSMUSG00000033703	ProperStrand	18	chr19	8798740	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-7.1868
chr7	148333005	148333026	protein_coding	Ptdss2	exon	ENSMUSG00000025495	ProperStrand	29	chr1	89673628	89673718	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	6	-inf
chr11	69730267	69730367	protein_coding	Eif5a	utr3	ENSMUSG00000078812	ProperStrand	164	chr17	35087894	35087929	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	2	-5.6428
chr6	125444650	125444668	protein_coding	Cd9	utr5	ENSMUSG00000030342	ProperStrand	81	chr11	69483136	69483261	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	5	-9.7818
chr7	109227552	109227626	protein_coding	Trpc2	exon	ENSMUSG00000070425	ProperStrand	15	chr18	63109676	63109692	protein_coding	Apcdd1	exon	ENSMUSG00000071847	NonProperStrand	254	1	-13.2406
chr6	140602761	140602796	protein_coding	Aebp2	utr3	ENSMUSG00000030232	ProperStrand	34	chr18	35714159	35714249	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-7.5267
chr7	117189863	117189943	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr5	14977911	14977927	protein_coding	Gm10354	intron	ENSMUSG00000072188	ProperStrand	16	1	-8.8687
chr11	98577507	98577554	protein_coding	Med24	exon	ENSMUSG00000017210	ProperStrand	28	chr2	130103751	130103809	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-10.0080
chr16	24477146	24477164	protein_coding	Lpp	intron	ENSMUSG00000033306	ProperStrand	38	chr17	13115654	13115715	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	1	-8.4488
chr15	76329028	76329118	protein_coding	Hsf1	exon	ENSMUSG00000022556	ProperStrand	4	chr11	69481381	69481461	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-8.6916
chr11	102855382	102855449	protein_coding	Dcakd	utr3	ENSMUSG00000020935	ProperStrand	61	chr13	21874822	21874867	protein_coding	Hist1h3i	utr3	ENSMUSG00000075032	ProperStrand	12	1	-16.5387
chr6	140603113	140603165	protein_coding	Aebp2	utr3	ENSMUSG00000030232	ProperStrand	34	chr18	73693167	73693187	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-6.6464
chr9	78023109	78023148	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chrX	93363117	93363157	protein_coding	Msn	utr3	ENSMUSG00000031207	ProperStrand	71	2	-9.0729
chr4	43505792	43505872	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr8	124940863	124940953	protein_coding	Zc3h18	utr3	ENSMUSG00000017478	ProperStrand	55	1	-3.2273
chr3	123210893	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	chr1	129228429	129228519	snoRNA	ENSMUSG00000093146_AC131793.1	.	ENSMUSG00000093146	ProperStrand	119	1	-1.0616
chr7	50784354	50784372	protein_coding	Cd33	exon	ENSMUSG00000004609	ProperStrand	23	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-5.2237
chr10	128309528	128314432	protein_coding	Sarnp	utr3	ENSMUSG00000078427	ProperStrand	9	chr8	98270015	98270063	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-9.3848
chr3	90912062	90912131	LTR	ORR1A4	MaLR	chr3ORR1A490911870	ProperStrand	1	chr10	89512698	89512714	protein_coding	Anks1b	exon	ENSMUSG00000058589	ProperStrand	68	1	-inf
chr4	131399490	131399506	protein_coding	Mecr	exon	ENSMUSG00000028910	NonProperStrand	109	chr17	35299507	35299641	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	2	-6.1784
chr8	98389037	98389095	protein_coding	Got2	exon	ENSMUSG00000031672	NonProperStrand	2	chr18	10151041	10151141	snRNA	ENSMUSG00000065941_U1	.	ENSMUSG00000065941	NonProperStrand	3	1	-inf
chr14	21603796	21603886	protein_coding	Camk2g	intron	ENSMUSG00000021820	ProperStrand	24	chr16	23111694	23111774	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.4982
chr5	81522762	81522780	protein_coding	Lphn3	intron	ENSMUSG00000037605	NonProperStrand	39	chr16	23110841	23110962	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.7347
chr11	33060360	33063068	protein_coding	Npm1	exon	ENSMUSG00000057113	ProperStrand	352	chr17	35299549	35299647	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	5	-8.6186
chr8	32239595	32239611	protein_coding	Rnf122	utr3	ENSMUSG00000039328	NonProperStrand	42	chr9	15514257	15514276	protein_coding	Slc36a4	exon	ENSMUSG00000043885	ProperStrand	94	1	-13.1304
chr17	25406169	25406201	protein_coding	Ube2i	exon	ENSMUSG00000015120	ProperStrand	20	chr4	132297368	132297415	protein_coding	Smpdl3b	exon	ENSMUSG00000028885	ProperStrand	11	2	-21.6018
chr8	13174432	13174518	protein_coding	Lamp1	exon	ENSMUSG00000031447	ProperStrand	92	chr1	180262033	180262077	protein_coding	Hnrnpu	exon	ENSMUSG00000039630	ProperStrand	286	1	-9.3257
chr7	85923399	85923416	protein_coding	Mrpl46	intron	ENSMUSG00000030612	ProperStrand	6	chr14	33005037	33005079	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-8.6411
chr4	86302942	86302986	protein_coding	Plin2	exon	ENSMUSG00000028494	ProperStrand	1	chr11	6428076	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-inf
chr2	26493417	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr10	39679333	39679349	protein_coding	BC021785	utr3	ENSMUSG00000038528	ProperStrand	6	2	-17.3626
chr2	29904254	29904270	protein_coding	Wdr34	exon	ENSMUSG00000039715	ProperStrand	5	chr15	5068441	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-11.2001
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr18	53845596	53845612	protein_coding	Cep120	exon	ENSMUSG00000048799	ProperStrand	91	1	-12.3155
chr14	124353869	124353886	protein_coding	Itgbl1	exon	ENSMUSG00000032925	ProperStrand	159	chr11	6520321	6520444	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	1	-5.7910
chr11	60566871	60566895	protein_coding	Top3a	intron	ENSMUSG00000002814	ProperStrand	28	chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	1	-10.3667
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	138070353	138070371	protein_coding	Lrch4	utr5	ENSMUSG00000093445	ProperStrand	16	1	-7.0757
chr4	126241213	126242178	protein_coding	Clspn	exon	ENSMUSG00000042489	ProperStrand	89	chr18	35714144	35714258	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	3	-7.0940
mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr2	164251433	164257652	protein_coding	Sdc4	utr3	ENSMUSG00000017009	ProperStrand	177	2	-6.4459
chr2	167836656	167836680	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	chr11	77316863	77316880	protein_coding	Git1	exon	ENSMUSG00000011877	ProperStrand	95	1	-11.2091
chr10	76526753	76527985	protein_coding	Col18a1	exon	ENSMUSG00000001435	ProperStrand	287	chr7	123476683	123476707	snoRNA	ENSMUSG00000064741_Snord14a	.	ENSMUSG00000064741	ProperStrand	83	1	-9.5249
chr5	73489665	73491250	protein_coding	Fryl	exon	ENSMUSG00000070733	ProperStrand	173	chr6	115757992	115758092	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-3.4609
chr6	61280218	61280237	protein_coding	Fam190a	intron	ENSMUSG00000039578	NonProperStrand	24	chr7	116663635	116663712	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.1859
chr17	3372653	3372671	protein_coding	Tiam2	intron	ENSMUSG00000023800	ProperStrand	6	chr19	8963086	8963182	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-6.7266
chr1	94816401	94816444	protein_coding	Rnpepl1	utr3	ENSMUSG00000026269	ProperStrand	7	chr10	23505152	23505283	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-inf
chr17	56728262	56733165	protein_coding	Safb	exon	ENSMUSG00000071054	ProperStrand	79	chr8	98269991	98270081	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-5.0065
chr1	162968213	162968283	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	chr13	96100610	96100691	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	2	-3.5245
chr18	89038499	89038515	protein_coding	Socs6	utr3	ENSMUSG00000056153	NonProperStrand	7	chr4	131908296	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-5.3201
chr14	35186540	35186648	protein_coding	Sncg	intron	ENSMUSG00000023064	NonProperStrand	1	chr16	23110829	23110874	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
mmu-miR-7033-5p	2	19	miRNA	mmu-miR-7033-5p	.	mmu-miR-7033-5p	ProperStrand	25	chr19	3376436	3376561	protein_coding	Cpt1a	exon	ENSMUSG00000024900	ProperStrand	48	1	-15.5202
chr6	127912103	127912203	protein_coding	Tspan9	utr3	ENSMUSG00000030352	ProperStrand	67	chr16	23110555	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.2755
chr11	72574887	72574962	protein_coding	Ankfy1	exon	ENSMUSG00000020790	ProperStrand	68	chr2	32818901	32818941	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	5	-19.0750
chr17	88385794	88385894	protein_coding	Msh6	exon	ENSMUSG00000005370	ProperStrand	150	chr19	8799598	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-4.9727
chr9	20420862	20420942	antisense	5730577I03Rik	.	ENSMUSG00000062470	ProperStrand	1	chr13	32371673	32371763	protein_coding	Gmds	intron	ENSMUSG00000038372	NonProperStrand	8	1	-inf
chr7	52378406	52378481	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	chr14	33005042	33005074	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	2	-0.9129
chr4	155193889	155193929	protein_coding-noncoding	Ccnl2	utr5	ENSMUSG00000029068	ProperStrand	5	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	3	-19.5978
chr15	79908427	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr8	113366285	113366344	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	2	-1.1081
chr11	68922008	68922593	protein_coding	Per1	exon	ENSMUSG00000020893	ProperStrand	46	chr5	121655032	121655129	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.2480
chr17	75690723	75690739	protein_coding	Ltbp1	exon	ENSMUSG00000001870	ProperStrand	136	chr19	8799022	8799073	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-4.2527
chr3	127140725	127140815	LINE	Lx8	L1	chr3Lx8127139969	ProperStrand	1	chr3	45207389	45207469	protein_coding	Pcdh10	intron	ENSMUSG00000049100	ProperStrand	2	1	-inf
chr8	53714097	53714177	LINE	L1_Mus3	L1	chr8L1_Mus353713828	NonProperStrand	1	chr6	45641619	45641709	protein_coding	Cntnap2	intron	ENSMUSG00000039419	ProperStrand	21	1	-inf
chr12	119320943	119320960	protein_coding	Dnahc11	exon	ENSMUSG00000018581	ProperStrand	65	chr18	68001766	68001786	protein_coding	Cep192	intron	ENSMUSG00000024542	ProperStrand	59	1	-13.1855
chr16	75761550	75765200	protein_coding	Hspa13	exon	ENSMUSG00000032932	NonProperStrand	57	chr4	122970407	122970485	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	5	-19.6990
chr2	71739193	71739231	protein_coding	Pdk1	utr3	ENSMUSG00000006494	ProperStrand	37	chr10	23505188	23505278	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-7.6112
chr14	63761430	63761525	protein_coding	Ctsb	utr3	ENSMUSG00000021939	ProperStrand	48	chr3	123210854	123210913	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.4382
chr15	78127411	78127427	protein_coding	Csf2rb2	exon	ENSMUSG00000071714	NonProperStrand	14	chr11	106362304	106362337	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-8.7702
chr5	87240280	87240332	protein_coding	Ythdc1	intron	ENSMUSG00000035851	ProperStrand	45	chr8	125626949	125626981	snoRNA	ENSMUSG00000064450_Snord68	.	ENSMUSG00000064450	ProperStrand	181	1	-11.6787
chr5	103854542	103891155	protein_coding	Ptpn13	utr5	ENSMUSG00000034573	NonProperStrand	74	chr11	62416602	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-4.7609
chr8	13416897	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr3	19126633	19126714	protein_coding	Pde7a	utr3	ENSMUSG00000069094	ProperStrand	12	1	-9.7127
chr6	29161967	29161985	protein_coding	Impdh1	intron	ENSMUSG00000003500	NonProperStrand	22	chr10	79321962	79322102	protein_coding	Ptbp1	exon	ENSMUSG00000006498	ProperStrand	129	1	-13.8124
chr17	28501460	28501476	protein_coding	Tulp1	exon	ENSMUSG00000037446	NonProperStrand	4	chr2	32818902	32818932	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-11.0985
chr6	115742546	115742636	protein_coding	Cand2	exon	ENSMUSG00000030319	NonProperStrand	21	chr9	118584070	118584102	protein_coding	Itga9	intron	ENSMUSG00000039115	ProperStrand	27	1	-17.0450
chr16	5256015	5256031	protein_coding	Fam86	utr5	ENSMUSG00000022544	ProperStrand	231	chr10	81056886	81056902	protein_coding	Tle6	exon	ENSMUSG00000034758	ProperStrand	10	1	-14.2797
chr11	101183137	101183202	protein_coding	Psme3	utr3	ENSMUSG00000078652	ProperStrand	17	chr16	23111389	23111479	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.3471
chr17	25398992	25399092	protein_coding	Ube2i	utr3	ENSMUSG00000015120	ProperStrand	20	chr7	148634808	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-6.1264
chr13	115243108	115243198	protein_coding	Fst	utr3	ENSMUSG00000021765	ProperStrand	1	chr16	23110454	23110489	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-inf
chr5	122252230	122264110	protein_coding	Atxn2	intron	ENSMUSG00000042605	ProperStrand	83	chr7	117189887	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	4	-9.6922
chr2	93040551	93040642	protein_coding	Trp53i11	utr3	ENSMUSG00000068735	ProperStrand	46	chr5	130295414	130295492	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-5.7685
chr9	65642754	65642854	protein_coding	Zfp609	exon	ENSMUSG00000040524	ProperStrand	87	chr15	34370542	34370588	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	5	-12.8437
chr7	53172436	53172482	protein_coding	Tmem143	utr3	ENSMUSG00000002781	ProperStrand	9	chr11	75281743	75281760	protein_coding	Tlcd2	exon	ENSMUSG00000038217	ProperStrand	23	1	-18.4712
chr3	51443854	51443871	LTR	MLT1B	MaLR	chr3MLT1B51443704	ProperStrand	16	chr4	131865856	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-6.9631
chr7	148195607	148195623	protein_coding	Ifitm3	utr3	ENSMUSG00000025492	NonProperStrand	20	chr10	90644840	90644902	tRNA	tRNA856-AspGTC	.	619572	ProperStrand	65	1	-15.3910
chr15	78939630	78939647	protein_coding	Micall1	utr5	ENSMUSG00000033039	ProperStrand	48	chr3	123210934	123210979	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	4	-8.9061
chr4	141673026	141673042	protein_coding	Kazn	exon	ENSMUSG00000040606	ProperStrand	123	chr8	98270006	98270082	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-4.1608
chr13	46822056	46822072	protein_coding	Nup153	intron	ENSMUSG00000021374	ProperStrand	69	chr11	97642955	97643055	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-3.9945
chr18	10052132	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr10	79493538	79493554	protein_coding	Hmha1	exon	ENSMUSG00000035697	NonProperStrand	23	1	-10.7388
chr18	57514476	57514499	protein_coding	Prrc1	utr5	ENSMUSG00000024594	NonProperStrand	22	chr4	131908689	131908749	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.8292
chr5	77712038	77712109	protein_coding	Rest	utr3	ENSMUSG00000029249	ProperStrand	136	chr11	97642980	97643070	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.2068
chr11	75578802	75578818	protein_coding	Ywhae	utr3	ENSMUSG00000020849	ProperStrand	176	chr17	7932179	7933533	protein_coding	Fndc1	exon	ENSMUSG00000071984	NonProperStrand	6	1	-15.9088
chr7	134503256	134503336	LTR	MYSERV6-int	ERVK	chr7MYSERV6-int134503177	ProperStrand	1	chr7	134503397	134503487	LTR	RLTR11A2	ERVK	chr7RLTR11A2134503361	ProperStrand	1	1	-inf
chr14	116454769	116454791	protein_coding	Gpc5	intron	ENSMUSG00000022112	ProperStrand	21	chr6	115757992	115758117	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-7.5625
chr13	30909523	31051695	protein_coding	Exoc2	intron	ENSMUSG00000021357	ProperStrand	24	chr3	123210854	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-6.2836
chr7	138704274	138704374	protein_coding	Bub3	exon	ENSMUSG00000066979	ProperStrand	24	chr7	16534823	16534839	protein_coding	Ehd2	utr3	ENSMUSG00000074364	NonProperStrand	197	9	-19.8822
chr15	37971601	37971701	protein_coding	Ubr5	exon	ENSMUSG00000037487	ProperStrand	258	chr7	116663715	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	6	-5.3635
chr6	55025400	55025475	protein_coding	Gars	exon	ENSMUSG00000029777	ProperStrand	71	chr9	15118563	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	1	-9.0041
chr3	101237609	101237642	protein_coding	Igsf3	intron	ENSMUSG00000042035	ProperStrand	73	chr9	15119631	15119732	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-6.1607
chr11	81044719	81044740	protein_coding	Accn1	intron	ENSMUSG00000020704	ProperStrand	69	chr4	131865902	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-2.9070
chr18	21142249	21142328	protein_coding	Rnf125	utr3	ENSMUSG00000033107	ProperStrand	5	chr14	76247713	76247739	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	3	-18.7556
chr11	60617790	60617890	protein_coding	Shmt1	exon	ENSMUSG00000020534	ProperStrand	60	chr8	32260335	32260388	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-4.6300
chr2	66137843	66140427	protein_coding	Scn1a	exon	ENSMUSG00000064329	ProperStrand	25	chr4	131865855	131865977	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.2649
chr2	26493472	26493500	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr18	84840229	84840245	protein_coding	Cndp2	exon	ENSMUSG00000024644	ProperStrand	10	1	-9.8302
chr2	73434618	73434634	antisense	Gm13704	.	ENSMUSG00000086544	NonProperStrand	53	chr17	39985652	39985752	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-6.1767
chr11	97891127	97891167	protein_coding	Rpl19	exon	ENSMUSG00000017404	ProperStrand	120	chr2	26447192	26447208	protein_coding	Egfl7	exon	ENSMUSG00000026921	ProperStrand	44	1	-12.5477
chr1	130155529	130156059	protein_coding	Ubxn4	exon	ENSMUSG00000026353	ProperStrand	19	chr11	97642997	97643077	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-7.6872
chr5	138220701	138220717	protein_coding	Ppp1r35	exon	ENSMUSG00000029725	ProperStrand	7	chr8	64017611	64028375	protein_coding	Palld	exon	ENSMUSG00000058056	NonProperStrand	125	1	-16.2625
chr19	6984448	6984464	protein_coding	Prdx5	utr5	ENSMUSG00000024953	ProperStrand	24	chr16	23110911	23110963	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.3518
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr19	8799020	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	8	-11.9319
chr19	3717095	3717111	protein_coding	1810055G02Rik	exon	ENSMUSG00000035372	NonProperStrand	15	chr16	23110874	23110911	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.0842
chr9	78327867	78327914	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr5	116684910	116684927	protein_coding	Ccdc60	intron	ENSMUSG00000043913	NonProperStrand	4	1	-11.9830
chr2	103588240	103588355	protein_coding	Nat10	exon	ENSMUSG00000027185	NonProperStrand	64	chr18	35716683	35716761	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.0639
chr2	70927899	70927915	protein_coding	Dcaf17	exon	ENSMUSG00000041966	NonProperStrand	89	chr18	35716763	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	8	-15.2944
chr7	106628072	106628123	snoRNA	ENSMUSG00000064966_Snord15b	.	ENSMUSG00000064966	ProperStrand	74	chr19	8799831	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	4	-14.3913
chr14	33154510	33155267	protein_coding	Ogdhl	exon	ENSMUSG00000021913	ProperStrand	182	chr17	34055566	34055656	protein_coding	Zbtb22	exon	ENSMUSG00000051390	ProperStrand	7	1	-15.5164
chr4	44045356	44045415	protein_coding	Clta	exon	ENSMUSG00000028478	ProperStrand	59	chr4	131865393	131865493	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	2	-6.7784
chr2	30675197	30675213	protein_coding	Mettl11a	exon	ENSMUSG00000026857	ProperStrand	51	chr7	73180108	73183920	protein_coding	Pcsk6	exon	ENSMUSG00000030513	ProperStrand	32	1	-14.9224
chr8	34496804	34496870	protein_coding	Purg	utr5	ENSMUSG00000049184	ProperStrand	3	chr4	131865933	131865988	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.6896
chr1	102076758	102076793	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	chr17	35087895	35087911	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-1.7310
chr18	24772342	24772375	protein_coding	Elp2	intron	ENSMUSG00000024271	ProperStrand	46	chr11	51551327	51551417	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	1	-8.2312
chr11	103511201	103511217	protein_coding	Rprml	exon	ENSMUSG00000046215	ProperStrand	16	chr12	106269477	106269558	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-6.7388
chr12	85015465	85015565	protein_coding	Rbm25	exon	ENSMUSG00000010608	ProperStrand	42	chr8	32260335	32260400	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-5.3213
chr8	125415536	125418848	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	chr4	131865855	131865971	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	5	-1.0984
chr12	8755298	8755315	protein_coding	Pum2	exon	ENSMUSG00000020594	ProperStrand	39	chr3	123210887	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.7988
chrX	138792791	138792909	protein_coding	Acsl4	intron	ENSMUSG00000031278	ProperStrand	31	chr11	62416627	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-6.4673
chr10	80642707	80642732	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr2	125579592	125579610	protein_coding	Secisbp2l	intron	ENSMUSG00000035093	ProperStrand	26	1	-7.7679
chr3	130951380	130951428	protein_coding	Hadh	exon	ENSMUSG00000027984	ProperStrand	35	chr11	59778161	59778177	protein_coding	Rasd1	exon	ENSMUSG00000049892	NonProperStrand	49	2	-inf
chr3	82816757	82816774	protein_coding	Fgg	exon	ENSMUSG00000033860	NonProperStrand	321	chr9	15118245	15118321	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-1.6937
chr17	47278369	47278385	protein_coding	Trerf1	intron	ENSMUSG00000064043	ProperStrand	56	chr13	49779745	49779803	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-7.1508
chr15	88953194	88953212	protein_coding	Tubgcp6	exon	ENSMUSG00000051786	ProperStrand	15	chr11	6428088	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.8593
chr10	127152805	127152822	protein_coding	Myo1a	exon	ENSMUSG00000025401	NonProperStrand	2	chr16	23110828	23110918	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr4	32367943	32367960	protein_coding	Bach2	intron	ENSMUSG00000040270	NonProperStrand	16	chr19	8800421	8800479	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-6.0928
chr2	90543276	90544000	protein_coding	Nup160	exon	ENSMUSG00000051329	ProperStrand	49	chr4	53873617	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	2	-14.9597
chr13	112243409	112243604	protein_coding	Gpbp1	exon	ENSMUSG00000032745	ProperStrand	85	chr11	55296285	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-5.4967
chr4	24555744	24555765	protein_coding	Klhl32	intron	ENSMUSG00000040387	ProperStrand	67	chr7	117189943	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.1324
chr7	52581011	52581036	protein_coding	Trpm4	intron	ENSMUSG00000038260	NonProperStrand	3	chr14	76247741	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-10.4338
chr1	39958358	39958379	protein_coding	Map4k4	exon	ENSMUSG00000026074	ProperStrand	348	chr9	120038613	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	3	-1.9212
chr13	97830495	97830512	LTR	MER67B	ERV1	chr13MER67B97830118	ProperStrand	1	chr18	35714216	35714260	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-inf
chr6	72300010	72301763	protein_coding	0610030E20Rik	utr3	ENSMUSG00000058706	ProperStrand	14	chr16	23111374	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	6	-19.8793
chr3	120907459	120907476	protein_coding	Tmem56	utr3	ENSMUSG00000028132	ProperStrand	30	chr7	117189864	117189980	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-7.7243
chr12	112215257	112215273	protein_coding	Ankrd9	exon	ENSMUSG00000037904	NonProperStrand	35	chr12	106269446	106269488	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-5.1779
chr2	138390201	138390218	protein_coding	Btbd3	intron	ENSMUSG00000062098	NonProperStrand	121	chr9	120038467	120038530	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.8539
chr4	132619726	132619816	protein_coding	Ahdc1	exon	ENSMUSG00000037692	ProperStrand	100	chr7	117189957	117190014	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	4	-8.8087
chr4	124796957	124796973	protein_coding	Zc3h12a	exon	ENSMUSG00000042677	ProperStrand	37	chr4	133053558	133053576	protein_coding	Trnp1	utr3	ENSMUSG00000056596	ProperStrand	3	1	-21.0941
chr11	70539836	70539936	protein_coding	Kif1c	exon	ENSMUSG00000020821	ProperStrand	26	chr16	23110539	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.9778
chr2	53003875	53003891	protein_coding	Prpf40a	exon	ENSMUSG00000061136	ProperStrand	129	chr11	106362638	106362688	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-5.8916
chr19	17404591	17404607	protein_coding	Gcnt1	exon	ENSMUSG00000038843	NonProperStrand	4	chr11	72257391	72257585	protein_coding	Mybbp1a	exon	ENSMUSG00000040463	ProperStrand	279	1	-15.8968
chr9	92476042	92476132	protein_coding	Plod2	exon	ENSMUSG00000032374	ProperStrand	52	chr10	90581143	90581174	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-5.0842
chr7	54441764	54442366	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	chr7	110699230	110699390	protein_coding	Olfr613	utr5	ENSMUSG00000078624	NonProperStrand	13	5	-20.2980
chr15	88986952	88987449	protein_coding	Plxnb2	exon	ENSMUSG00000036606	ProperStrand	119	chr7	118219625	118219715	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-2.9132
chr9	115219006	115219023	protein_coding	Stt3b	exon	ENSMUSG00000032437	NonProperStrand	9	chr18	21740777	21740793	protein_coding	Klhl14	intron	ENSMUSG00000042514	ProperStrand	4	1	-19.7249
chr7	133643758	133644278	protein_coding	Atxn2l	exon	ENSMUSG00000032637	ProperStrand	219	chr2	145077955	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-5.1748
chr2	127284913	127284930	protein_coding	Kcnip3	intron	ENSMUSG00000079056	ProperStrand	14	chr11	6428088	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.9988
chr6	124662513	124662743	protein_coding	Phb2	exon	ENSMUSG00000004264	ProperStrand	43	chr7	17468814	17470464	protein_coding	Dact3	exon	ENSMUSG00000078794	ProperStrand	6	1	-18.4763
chr8	4187321	4187385	protein_coding	Evi5l	exon	ENSMUSG00000011832	ProperStrand	1	chr4	131865865	131865955	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr4	22414139	22414155	protein_coding	Pou3f2	exon	ENSMUSG00000052621	NonProperStrand	90	chr5	130295413	130295469	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-4.4672
chr10	63552101	63552119	protein_coding	Lrrtm3	exon	ENSMUSG00000042846	ProperStrand	63	chr2	29882542	29882581	protein_coding	Spna2	exon	ENSMUSG00000057738	ProperStrand	222	1	-10.5915
chr5	149100499	149100516	protein_coding	Mtus2	exon	ENSMUSG00000029651	ProperStrand	114	chr8	48578626	48578661	protein_coding	D030016E14Rik	exon	ENSMUSG00000038102	ProperStrand	15	1	-14.8437
chr10	90581044	90581134	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	chrX	143918840	143918920	snoRNA	ENSMUSG00000084421_SNORA35	.	ENSMUSG00000084421	ProperStrand	293	7	-14.6238
chr1	121818517	121818607	LTR	MTEb	MaLR	chr1MTEb121818444	ProperStrand	1	chr1	121818134	121818214	LTR	RMER19A	ERVK	chr1RMER19A121817607	NonProperStrand	1	1	-inf
chr11	84798008	84798090	protein_coding	Usp32	utr3	ENSMUSG00000000804	ProperStrand	45	chr4	131866156	131866246	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-4.2057
chr17	37200343	37200443	protein_coding	Gabbr1	intron	ENSMUSG00000024462	ProperStrand	27	chr15	79913288	79913346	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-5.1173
chr10	36716842	36716899	protein_coding	Hdac2	exon	ENSMUSG00000019777	ProperStrand	36	chr16	23110902	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-2.8301
chr13	68759738	68764669	protein_coding	Adcy2	exon	ENSMUSG00000021536	ProperStrand	237	chr17	12876050	12876078	protein_coding	Igf2r	utr3	ENSMUSG00000023830	ProperStrand	151	1	-8.7102
chr1	115800666	115800686	lincRNA	9330185C12Rik	intron	ENSMUSG00000086520	ProperStrand	45	chr8	125627098	125627173	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	1	-11.1901
chr5	115983444	115983460	protein_coding	Pxn	intron	ENSMUSG00000029528	ProperStrand	171	chr19	5687621	5687999	protein_coding	Pcnxl3	exon	ENSMUSG00000054874	ProperStrand	96	1	-10.2677
chr1	63260754	63260770	protein_coding	Gpr1	utr5	ENSMUSG00000046856	NonProperStrand	32	chr15	79908959	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-6.7153
chr12	58691976	58691992	antisense	4921518K17Rik	.	ENSMUSG00000085851	ProperStrand	75	chr19	8798740	8798794	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-4.3737
chr16	20539454	20539489	protein_coding	Ap2m1	exon	ENSMUSG00000022841	ProperStrand	23	chr7	34999557	34999606	protein_coding	Gpi1	intron	ENSMUSG00000036427	ProperStrand	288	3	-inf
chr1	145971868	145971889	LINE	L2	L2	chr1L2145971861	NonProperStrand	49	chr4	131908809	131908896	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.5109
chr1	34247869	34247959	protein_coding	Dst	utr5	ENSMUSG00000026131	ProperStrand	461	chr5	108334204	108334284	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	5	-7.3137
chr4	131908404	131908453	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr15	10965488	10965504	protein_coding	Rxfp3	utr3	ENSMUSG00000060735	ProperStrand	37	1	-8.2271
chr18	80403700	80403716	protein_coding	Txnl4a	utr5	ENSMUSG00000057130	ProperStrand	44	chr4	116826700	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-7.3993
chr9	114645563	114645614	protein_coding	Cmtm6	intron	ENSMUSG00000032434	ProperStrand	24	chrX	34622958	34623021	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-4.9020
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr11	62416976	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-1.9407
chr17	35384172	35384195	snoRNA	ENSMUSG00000065273_SNORD83	.	ENSMUSG00000065273	ProperStrand	244	chr2	144087332	144087375	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-3.8383
chr3	96218384	96218474	misc_RNA	Telomerase-vert	.	ENSMUSG00000064796	ProperStrand	443	chr11	97641535	97641591	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	1	-3.9629
chr11	75572827	75572846	protein_coding	Ywhae	exon	ENSMUSG00000020849	ProperStrand	176	chr9	4299367	4302483	protein_coding	Aasdhppt	exon	ENSMUSG00000025894	ProperStrand	121	1	-9.7465
chr8	59986250	59986285	lincRNA	2500002B13Rik	exon	ENSMUSG00000086276	ProperStrand	46	chr10	39978338	39978394	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	2	-9.7391
chr14	118303940	118303958	protein_coding	Gpc6	intron	ENSMUSG00000058571	NonProperStrand	31	chr16	23110913	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-3.2978
chr6	128385863	128386666	protein_coding	Fkbp4	exon	ENSMUSG00000030357	ProperStrand	114	chr16	23111392	23111472	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-1.9558
chr5	76006953	76007000	protein_coding	Kit	intron	ENSMUSG00000005672	ProperStrand	58	chr9	15119987	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	3	-16.5052
chr15	36527822	36538102	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr9	120037901	120038045	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	2	-1.0123
chr8	108463501	108463517	antisense	Gm16156	.	ENSMUSG00000087436	ProperStrand	2	chr2	26768049	26768079	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	1	-15.8407
chr3	88659758	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chrX	34622904	34623025	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	12	-3.8269
chr10	99909846	99909870	protein_coding	Tmtc3	exon	ENSMUSG00000036676	ProperStrand	53	chr17	35089181	35089237	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	3	-13.2780
chr12	68768638	68768719	LINE	L1Md_F2	L1	chr12L1Md_F268768613	NonProperStrand	12	chr5	30387220	30387310	protein_coding	Tyms	utr3	ENSMUSG00000025747	ProperStrand	8	1	-19.1875
chr6	134463273	134463299	protein_coding	Lrp6	exon	ENSMUSG00000030201	ProperStrand	42	chr8	73419656	73419756	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.7861
chr4	63092920	63092960	protein_coding	Whrn	exon	ENSMUSG00000039137	ProperStrand	20	chr4	131865884	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-12.4569
chr14	15612888	15612924	protein_coding	Slc4a7	intron	ENSMUSG00000021733	ProperStrand	24	chr4	132333798	132333863	protein_coding	Rpa2	utr3	ENSMUSG00000028884	ProperStrand	8	3	-19.6479
chr2	60807297	60807314	lincRNA	Gm13582	exon	ENSMUSG00000075325	NonProperStrand	1	chr9	120039576	120039676	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-inf
chr13	69637749	69637765	protein_coding	Papd7	utr3	ENSMUSG00000034575	ProperStrand	10	chr12	81745795	81745813	protein_coding	Slc39a9	utr5	ENSMUSG00000048833	NonProperStrand	3	1	-inf
chr13	23790251	23790319	protein_coding	Hist1h4c	utr5	ENSMUSG00000060678	ProperStrand	19	chr4	149621978	149622172	protein_coding	Eno1	exon	ENSMUSG00000063524	ProperStrand	432	4	-20.7101
chr2	18709312	18709402	LINE	L1_Mus3	L1	chr2L1_Mus318708702	NonProperStrand	2	chr9	56138941	56139021	protein_coding	C230081A13Rik	intron	ENSMUSG00000074305	ProperStrand	40	1	-inf
chr1	43171734	43171834	protein_coding	AI597479	utr3	ENSMUSG00000010290	ProperStrand	36	chr11	69481335	69481389	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-4.1502
chr2	130109497	130109513	protein_coding	Idh3b	exon	ENSMUSG00000027406	ProperStrand	146	chr16	24976641	24976660	protein_coding	Lpp	intron	ENSMUSG00000033306	NonProperStrand	189	1	-9.2287
chr9	15080316	15080347	protein_coding	Med17	exon	ENSMUSG00000031935	ProperStrand	135	chr16	23110533	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.2088
chr14	76247758	76247842	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	chr5	125884616	125884652	tRNA	tRNA1317-AlaTGC	.	423388	ProperStrand	149	3	-6.6253
chr14	64081496	64081513	protein_coding	Fam167a	utr3	ENSMUSG00000035095	ProperStrand	80	chr7	116663634	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.0324
chr2	32270352	32270419	protein_coding	Slc25a25	utr3	ENSMUSG00000026819	ProperStrand	7	chr12	70258779	70259693	protein_coding	Rps29	exon	ENSMUSG00000034892	ProperStrand	124	1	-16.3087
chr11	11867679	11870432	protein_coding	Grb10	exon	ENSMUSG00000020176	NonProperStrand	159	chr9	15119631	15119712	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.1219
chr11	6319524	6319577	protein_coding	Ppia	exon	ENSMUSG00000071866	ProperStrand	127	chr2	32530737	32530769	snoRNA	ENSMUSG00000093277_AL772271.2	.	ENSMUSG00000093277	ProperStrand	23	2	-19.0537
chr12	112907663	112909155	protein_coding	Ckb	exon	ENSMUSG00000001270	ProperStrand	28	chr4	131866159	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	4	-16.0170
chr18	37673599	37673615	protein_coding	Pcdhb21	exon	ENSMUSG00000044022	NonProperStrand	23	chr11	55296242	55296258	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-8.0982
chr11	45761648	45761748	protein_coding	Thg1l	utr3	ENSMUSG00000011254	ProperStrand	19	chr18	35716849	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	11	-inf
chr15	82009828	82009951	protein_coding	Srebf2	exon	ENSMUSG00000022463	ProperStrand	592	chr11	106362349	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	3	-4.8058
chr11	68886926	68887026	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	NonProperStrand	12	chr5	23358061	23358102	snoRNA	ENSMUSG00000093321_Snord93	.	ENSMUSG00000093321	NonProperStrand	1	1	-inf
chr11	59631428	59631512	protein_coding	Cops3	utr3	ENSMUSG00000019373	ProperStrand	19	chr3	123210854	123210915	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-4.1309
chr19	27465656	27465722	protein_coding	D19Bwg1357e	intron	ENSMUSG00000041360	ProperStrand	110	chr11	43532825	43532874	protein_coding	Pwwp2a	intron	ENSMUSG00000044950	ProperStrand	22	3	-inf
chr17	13112450	13112528	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	NonProperStrand	11	chr11	69483181	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	NonProperStrand	35	2	-21.5016
chr8	127227939	127227971	protein_coding	Ttc13	intron	ENSMUSG00000037300	ProperStrand	20	chr9	120038610	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.1184
chr13	73463407	73463423	protein_coding	Ndufs6	intron	ENSMUSG00000021606	NonProperStrand	52	chr7	52382011	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-6.9963
chr19	45409733	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr7	52382237	52382314	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-3.8078
chr4	131399490	131399506	protein_coding	Mecr	exon	ENSMUSG00000028910	NonProperStrand	109	chr7	116663635	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-2.8960
chr12	85534181	85534207	protein_coding	C130039O16Rik	intron	ENSMUSG00000042507	NonProperStrand	5	chr18	33954867	33954922	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-8.5187
chr1	24620918	24620999	protein_coding	Gm10925	utr3	ENSMUSG00000090378	ProperStrand	320	chr1	88247743	88247791	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-2.0594
chr7	112782969	112782985	protein_coding	Arfip2	utr3	ENSMUSG00000030881	ProperStrand	191	chr17	46814962	46815237	protein_coding	Klhdc3	exon	ENSMUSG00000063576	ProperStrand	35	1	-12.0790
chrX	157236766	157236783	protein_coding	Rs1	utr3	ENSMUSG00000031293	ProperStrand	3	chr12	17552964	17553071	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	2	-19.3291
mmu-miR-1949	3	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr17	34978621	34978689	protein_coding	Skiv2l	exon	ENSMUSG00000040356	ProperStrand	8	1	-12.2805
chr8	73437300	73437379	protein_coding	Mtap1s	exon	ENSMUSG00000019261	ProperStrand	60	chr18	37911790	37911806	protein_coding	Pcdhga9	intron	ENSMUSG00000023036	ProperStrand	245	1	-10.4924
chr10	127010005	127010095	protein_coding	Lrp1	exon	ENSMUSG00000040249	ProperStrand	151	chr11	97639599	97639618	protein_coding	Rpl23	exon	ENSMUSG00000071415	ProperStrand	920	1	-6.0291
chr8	3803229	3803342	misc_RNA	RNaseP_nuc	.	ENSMUSG00000088025	NonProperStrand	14	chr14	51427116	51427215	misc_RNA	AC027184.1	.	ENSMUSG00000092837	NonProperStrand	20	13	-inf
chr17	12472796	12472817	protein_coding	Map3k4	intron	ENSMUSG00000014426	ProperStrand	36	chr4	86500831	86501778	protein_coding	Rps6	exon	ENSMUSG00000028495	ProperStrand	263	1	-11.3818
chr2	75503186	75503296	protein_coding	Hnrnpa3	exon	ENSMUSG00000059005	ProperStrand	289	chr11	68887021	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	2	-2.7206
chr8	4524916	4524937	protein_coding	Lass4	utr3	ENSMUSG00000008206	ProperStrand	6	chr17	24857716	24857775	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-6.7526
chrX	136477841	136477857	protein_coding	Rbm41	intron	ENSMUSG00000031433	ProperStrand	2	chr15	79908956	79909022	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-12.8905
chr15	98694333	98694433	protein_coding	Mll2	exon	ENSMUSG00000048154	ProperStrand	170	chr7	150717298	150717349	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-3.5257
chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	chr8	98269959	98270014	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	2	-6.6915
chr3	157210608	157210708	protein_coding	Zranb2	utr3	ENSMUSG00000028180	ProperStrand	43	chr18	35102298	35102340	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-7.2529
chr10	110934259	110934288	protein_coding	Nap1l1	utr3	ENSMUSG00000058799	ProperStrand	185	chr3	68889052	68889147	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-1.3999
chr8	86491758	86491845	protein_coding	Asf1b	exon	ENSMUSG00000005470	ProperStrand	14	chr19	44188405	44188495	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	1	-10.7481
chr7	29783535	29783666	protein_coding	Map4k1	exon	ENSMUSG00000037337	ProperStrand	31	chr9	120038019	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-5.9972
chr11	4387422	4392849	protein_coding	Mtmr3	exon	ENSMUSG00000034354	ProperStrand	25	chr16	23110936	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-5.7718
chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	chr17	27236036	27236052	protein_coding	Itpr3	exon	ENSMUSG00000042644	ProperStrand	137	1	-10.9088
chr8	125418802	125418819	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	chr16	56035862	56035962	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	1	-5.2972
chr11	76072745	76072809	protein_coding	Nxn	intron	ENSMUSG00000020844	ProperStrand	20	chr10	23505152	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-13.7931
chr1	89822470	89822634	protein_coding	Dgkd	exon	ENSMUSG00000070738	ProperStrand	39	chr7	116664808	116664866	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	4	-11.2920
chr18	83625632	83625649	SINE	B4	B4	chr18B483625534	ProperStrand	4	chr2	143780927	143782505	protein_coding	Rrbp1	exon	ENSMUSG00000027422	ProperStrand	76	1	-18.4156
chr18	52854063	52854080	protein_coding	Gykl1	exon	ENSMUSG00000053624	ProperStrand	18	chr16	23111772	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-6.8529
chr12	4326024	4326042	protein_coding	Ncoa1	intron	ENSMUSG00000020647	NonProperStrand	10	chr18	75161682	75161754	protein_coding	Rpl17	exon	ENSMUSG00000062328	ProperStrand	90	1	-16.1631
chr12	118832662	118832682	protein_coding	Rapgef5	intron	ENSMUSG00000041992	ProperStrand	14	chr11	69483207	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	NonProperStrand	35	2	-inf
chr6	119874806	119874884	protein_coding	Wnk1	utr3	ENSMUSG00000045962	ProperStrand	221	chr1	162968447	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-3.5823
chr7	148050898	148051023	protein_coding	Sirt3	exon	ENSMUSG00000025486	ProperStrand	33	chr11	102294588	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	7	-inf
chr10	62341536	62341626	protein_coding	Tet1	exon	ENSMUSG00000047146	ProperStrand	286	chr15	34370555	34370635	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-1.0304
chr14	102569722	102569812	LINE	L1Md_F2	L1	chr14L1Md_F2102569625	ProperStrand	1	chr14	33616231	33616321	protein_coding	1810011H11Rik	intron	ENSMUSG00000041707	ProperStrand	2	1	-inf
chr5	125316615	125316632	protein_coding	Ccdc92	exon	ENSMUSG00000037979	ProperStrand	45	chr2	22444483	22444514	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-8.3526
chr11	97643000	97643090	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	chr8	113362456	113362493	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	5	-1.8233
chr4	41337943	41337960	protein_coding	Kif24	utr3	ENSMUSG00000028438	NonProperStrand	2	chr6	128380407	128380428	protein_coding	Fkbp4	utr3	ENSMUSG00000030357	ProperStrand	114	1	-20.8086
chr14	9003820	9004003	protein_coding	Pdhb	exon	ENSMUSG00000021748	ProperStrand	28	chr1	53405312	53405392	protein_coding	Asnsd1	utr5	ENSMUSG00000026095	ProperStrand	6	1	-19.3793
chr10	127133374	127133411	protein_coding	Tmem194	exon	ENSMUSG00000040195	ProperStrand	6	chr4	131908356	131908456	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-5.6461
chr1	133394820	133394840	protein_coding	Srgap2	intron	ENSMUSG00000026425	ProperStrand	299	chr13	49779747	49779802	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	2	-6.5575
chr11	57619649	57621564	protein_coding	Sap30l	exon	ENSMUSG00000020519	ProperStrand	3	chr18	35716812	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-13.9285
chr19	41986505	41992311	protein_coding	Pgam1	utr5	ENSMUSG00000011752	ProperStrand	124	chr4	131908236	131908283	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-3.0735
chr8	74008400	74008417	protein_coding	Ano8	exon	ENSMUSG00000034863	NonProperStrand	171	chr19	8963086	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-1.5967
chr19	42222914	42222931	protein_coding	Marveld1	utr3	ENSMUSG00000044345	ProperStrand	3	chr2	91436269	91436336	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-13.8627
chrX	12859104	12859204	protein_coding	Ddx3x	intron	ENSMUSG00000000787	ProperStrand	67	chr18	75161534	75161602	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-6.9836
chr15	76059807	76059823	protein_coding	Plec	exon	ENSMUSG00000022565	ProperStrand	186	chr4	131865391	131865427	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-2.0063
chr10	36718278	36718351	protein_coding	Hdac2	exon	ENSMUSG00000019777	ProperStrand	36	chr7	116664871	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.4622
chr11	100570288	100570415	protein_coding	Kat2a	exon	ENSMUSG00000020918	ProperStrand	68	chr9	15118291	15118320	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.2382
chr19	38470512	38470530	protein_coding	Tmem20	utr5	ENSMUSG00000044026	NonProperStrand	23	chr8	46112120	46112136	protein_coding	Fat1	exon	ENSMUSG00000070047	ProperStrand	306	1	-11.9891
chr6	122682395	122682792	protein_coding	Slc2a3	exon	ENSMUSG00000003153	ProperStrand	682	chr6	29420125	29420142	protein_coding	Atp6v1f	exon	ENSMUSG00000004285	NonProperStrand	6	1	-13.2067
chr4	130491910	130491957	protein_coding	Laptm5	utr3	ENSMUSG00000028581	ProperStrand	34	chr5	108336379	108336469	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-5.9928
chr10	12902322	12902670	protein_coding	Ltv1	exon	ENSMUSG00000019814	ProperStrand	76	chr2	37418999	37419030	protein_coding	Rabgap1	exon	ENSMUSG00000035437	ProperStrand	20	1	-15.0587
chr13	59803286	59803302	protein_coding	Fam75d3	exon	ENSMUSG00000050876	ProperStrand	46	chr2	92200471	92200494	protein_coding	Phf21a	exon	ENSMUSG00000058318	ProperStrand	25	1	-15.6169
chr14	66211763	66211842	protein_coding	Elp3	exon	ENSMUSG00000022031	ProperStrand	71	chr16	23110456	23110546	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.1793
chr6	87800908	87800943	protein_coding	Cnbp	utr5	ENSMUSG00000030057	ProperStrand	46	chr6	71832596	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-6.1339
chr1	162966806	162967416	non_coding	Gas5	.	ENSMUSG00000053332	ProperStrand	144	chr19	8800379	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	9	-20.8647
chr8	34893318	34893337	protein_coding	Rbpms	utr3	ENSMUSG00000031586	ProperStrand	58	chr1	90123798	90124639	protein_coding	Heatr7b1	utr5	ENSMUSG00000079429	ProperStrand	147	1	-11.5833
chr4	141028708	141028724	protein_coding	Spen	exon	ENSMUSG00000040761	NonProperStrand	6	chr15	101914797	101915216	protein_coding	Eif4b	exon	ENSMUSG00000058655	ProperStrand	484	3	-19.0849
chr14	57312836	57312971	protein_coding	Mphosph8	intron	ENSMUSG00000079184	NonProperStrand	27	chr18	35716765	35716855	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.5820
chr8	119148033	119148123	protein_coding	Cdyl2	exon	ENSMUSG00000031758	ProperStrand	35	chr7	117166770	117166850	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-5.8692
mmu-miR-2137	0	19	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	chr13	57804969	57804986	protein_coding	Spock1	intron	ENSMUSG00000056222	NonProperStrand	20	1	-13.7820
chr17	66468411	66468427	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	chr3	108357354	108357408	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-1.5307
chr19	6985776	6985792	protein_coding	Esrra	utr3	ENSMUSG00000024955	NonProperStrand	4	chr19	8800359	8800459	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-9.0532
chr10	6063959	6063978	protein_coding	Akap12	intron	ENSMUSG00000038587	ProperStrand	1008	chr8	119467566	119467632	protein_coding	Atmin	utr5	ENSMUSG00000047388	ProperStrand	26	1	-9.3589
chr16	13903011	13903057	protein_coding	Pdxdc1	utr5	ENSMUSG00000022680	ProperStrand	26	chr16	23111462	23111505	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.5788
chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	chr14	76247711	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	10	-16.5546
chr12	17552950	17553087	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr17	35087894	35087964	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	13	-4.4805
chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	chr12	106269289	106269389	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-1.6787
chr3	41418492	41418556	protein_coding	Phf17	utr3	ENSMUSG00000025764	ProperStrand	101	chr5	108334196	108334286	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-3.8316
chr11	74452553	74452574	protein_coding	E130309D14Rik	utr3	ENSMUSG00000069814	NonProperStrand	3	chr10	23505152	23505218	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-12.0722
chr8	129160124	129160204	SINE	B2_Mm2	B2	chr8B2_Mm2129160095	NonProperStrand	1	chr8	129666489	129666579	protein_coding	Pard3	intron	ENSMUSG00000025812	ProperStrand	44	1	-inf
chr4	55431651	55431668	lincRNA	Gm12505	exon	ENSMUSG00000087070	ProperStrand	447	chr2	26493383	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	1	-2.4398
chr17	24615989	24616006	protein_coding	Mlst8	utr5	ENSMUSG00000024142	NonProperStrand	40	chr4	131908356	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.0419
chr9	96980776	96980849	protein_coding	Slc25a36	exon	ENSMUSG00000032449	ProperStrand	159	chr5	130300470	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.0319
chr2	73270052	73270069	protein_coding	Wipf1	utr3	ENSMUSG00000075284	ProperStrand	6	chr5	130295414	130295490	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-9.9551
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr11	93811301	93811335	protein_coding	Gm20390	exon	ENSMUSG00000091228	ProperStrand	33	1	-8.4322
chr16	23110454	23110551	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	chr10	127522372	127522416	snoRNA	ENSMUSG00000093245_AC131120.1	.	ENSMUSG00000093245	ProperStrand	77	6	-12.6108
chrX	72347891	72349755	protein_coding	Dkc1	exon	ENSMUSG00000031403	NonProperStrand	2	chr16	23110869	23110957	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	NonProperStrand	93	2	-inf
chr4	133536126	133538784	protein_coding	Dhdds	exon	ENSMUSG00000012117	ProperStrand	11	chr9	120038557	120038637	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	6	-21.8355
chr15	96415995	96417317	protein_coding	Slc38a1	exon	ENSMUSG00000023169	ProperStrand	69	chr8	129468786	129468866	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-4.1483
chr14	41817467	41826962	protein_coding	5730469M10Rik	utr5	ENSMUSG00000021792	ProperStrand	4	chr16	23110919	23110999	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.6489
mmu-miR-1949	3	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr11	102929331	102929393	protein_coding	Nmt1	utr3	ENSMUSG00000020936	ProperStrand	43	1	-8.8174
chr6	115228264	115228280	protein_coding	Syn2	exon	ENSMUSG00000009394	NonProperStrand	8	chr1	162968447	162968464	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-10.1853
chr4	46499767	46499784	SINE	ID_B1	B4	chr4ID_B146499735	ProperStrand	33	chr5	135857468	135857520	protein_coding	Pom121	exon	ENSMUSG00000053293	ProperStrand	127	1	-13.0154
chr3	7986544	7986634	LINE	Lx	L1	chr3Lx7986377	ProperStrand	1	chr8	86984968	86985058	protein_coding	Cacna1a	intron	ENSMUSG00000034656	ProperStrand	35	1	-inf
chr11	30054246	30054290	protein_coding	Spnb2	exon	ENSMUSG00000020315	ProperStrand	103	chrX	98748061	98748077	protein_coding	Taf1	exon	ENSMUSG00000031314	ProperStrand	61	1	-12.1944
chr10	80641693	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	chr7	117189942	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	12	-5.7350
chr4	122926840	122926858	protein_coding	Heyl	utr3	ENSMUSG00000032744	ProperStrand	31	chr9	15119726	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.8279
chr5	104483368	104484556	protein_coding	Nudt9	exon	ENSMUSG00000029310	ProperStrand	9	chr16	23110985	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.9939
chr13	28653437	28700391	lincRNA	2610307P16Rik	exon	ENSMUSG00000085936	ProperStrand	154	chr9	120037991	120038030	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-2.9555
chr8	107783510	107783527	protein_coding	Tradd	exon	ENSMUSG00000031887	ProperStrand	23	chrX	113862542	113862573	snoRNA	ENSMUSG00000088518_SNORA9	.	ENSMUSG00000088518	ProperStrand	280	1	-12.1675
chr3	68596572	68596590	SINE	ID2	ID	chr3ID268596528	NonProperStrand	1	chr1	162965531	162965554	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-inf
chrX	147428574	147428674	protein_coding	Gnl3l	exon	ENSMUSG00000025266	ProperStrand	52	chr7	29136636	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.6097
chr1	166368262	166368365	protein_coding	Atp1b1	utr3	ENSMUSG00000026576	ProperStrand	67	chr10	23505152	23505215	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-3.4353
chr9	44188677	44199366	protein_coding	Hyou1	utr3	ENSMUSG00000032115	ProperStrand	145	chr10	23505151	23505282	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-0.7314
chr10	41994812	41994902	protein_coding	Foxo3	exon	ENSMUSG00000048756	ProperStrand	59	chr7	117189974	117190054	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.3631
chr8	73032388	73033237	protein_coding	2810422J05Rik	exon	ENSMUSG00000055553	ProperStrand	171	chr5	130300531	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-3.0547
chr3	38790074	38790090	protein_coding	Fat4	exon	ENSMUSG00000046743	NonProperStrand	13	chr7	116664871	116664907	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-5.4346
chr5	100855902	100855941	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr11	102066233	102066619	protein_coding	Hdac5	exon	ENSMUSG00000008855	ProperStrand	45	1	-7.2102
chr13	36960348	36960365	protein_coding	F13a1	utr3	ENSMUSG00000039109	NonProperStrand	15	chr19	8799850	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-7.7094
chr8	74613969	74614059	LINE	L1MA9	L1	chr8L1MA974613895	NonProperStrand	1	chr8	74613725	74613805	LTR	RLTR20B3	ERVK	chr8RLTR20B374613334	NonProperStrand	1	1	-inf
chr17	36097585	36097760	protein_coding	Abcf1	exon	ENSMUSG00000038762	ProperStrand	206	chr15	98350175	98350255	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-2.4996
chrX	34466827	34470101	protein_coding	Sept6	exon	ENSMUSG00000050379	ProperStrand	29	chr9	120038564	120038656	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	15	-inf
chr7	133931113	133931665	protein_coding	Ppp4c	exon	ENSMUSG00000030697	ProperStrand	12	chr7	106631294	106631321	snoRNA	ENSMUSG00000065822_Snord15a	.	ENSMUSG00000065822	ProperStrand	128	1	-15.0796
chr7	48982043	48982060	processed_transcript	Vmn2r-ps54	.	ENSMUSG00000074164	NonProperStrand	19	chr14	31373862	31378705	protein_coding	Tkt	exon	ENSMUSG00000021957	ProperStrand	160	1	-13.6836
chr6	39355878	39355910	protein_coding	Mkrn1	exon	ENSMUSG00000029922	ProperStrand	177	chr19	9043709	9043878	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	1	-7.3059
chr2	38012954	38012970	protein_coding	Dennd1a	intron	ENSMUSG00000035392	NonProperStrand	128	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-5.7083
chr6	115757992	115758105	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr1	89673606	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	24	-3.8995
chr13	72763664	72763680	antisense	Gm20554	.	ENSMUSG00000093587	NonProperStrand	40	chr1	90161009	90161092	protein_coding	Hjurp	utr3	ENSMUSG00000044783	ProperStrand	110	4	-inf
chr8	122284828	122284911	protein_coding	4632415K11Rik	utr3	ENSMUSG00000034105	ProperStrand	3	chr16	23110935	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr12	28026410	28026466	protein_coding	Sox11	exon	ENSMUSG00000063632	NonProperStrand	3	chr11	69483136	69483195	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	NonProperStrand	35	2	-inf
chr11	61707037	61710179	protein_coding	Akap10	exon	ENSMUSG00000047804	ProperStrand	17	chr5	130300473	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-11.6855
chr12	103983248	103983321	protein_coding	D230037D09Rik	utr3	ENSMUSG00000046675	ProperStrand	4	chr10	23505159	23505195	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-6.2798
chr1	155193316	155193333	LINE	Lx8	L1	chr1Lx8155193282	NonProperStrand	3	chr8	13416895	13416912	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-12.7981
chr3	61538373	61538453	LINE	Lx5	L1	chr3Lx561537306	ProperStrand	1	chr3	63023843	63023933	LTR	RMER12B	ERVK	chr3RMER12B63023629	NonProperStrand	1	1	-inf
chrX	84483696	84483721	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr1	162968214	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	6	-12.6227
chr1	172079405	172079495	protein_coding	Uap1	exon	ENSMUSG00000026670	ProperStrand	18	chr18	35716759	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.3552
chr16	18410843	18411238	protein_coding	Comt	exon	ENSMUSG00000000326	ProperStrand	9	chr17	75054577	75054611	protein_coding	Birc6	exon	ENSMUSG00000024073	ProperStrand	110	2	-inf
chr4	115980844	115980860	protein_coding	Mast2	exon	ENSMUSG00000003810	NonProperStrand	10	chr5	115692543	115694054	protein_coding	Rnf10	exon	ENSMUSG00000041740	ProperStrand	95	1	-16.0561
chr4	43505656	43505721	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr6	49207332	49207368	protein_coding	Tra2a	intron	ENSMUSG00000029817	ProperStrand	54	2	-5.5950
chr2	26493424	26493514	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr19	17474303	17474346	protein_coding	Rfk	utr3	ENSMUSG00000024712	ProperStrand	4	1	-11.8409
chr14	27919894	27919931	protein_coding	Il17rd	utr3	ENSMUSG00000040717	ProperStrand	24	chr15	79913288	79913345	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	3	-12.6111
chr19	3904233	3904250	protein_coding	Tcirg1	exon	ENSMUSG00000001750	ProperStrand	77	chr11	107554282	107554336	protein_coding	Helz	utr3	ENSMUSG00000020721	ProperStrand	60	1	-12.8125
chr11	87327955	87328003	protein_coding	Tex14	utr5	ENSMUSG00000010342	ProperStrand	41	chr3	108228259	108228275	protein_coding	Sars	utr3	ENSMUSG00000068739	NonProperStrand	200	1	-11.6667
chr3	157689072	157689090	protein_coding-noncoding	Srsf11	utr3	ENSMUSG00000055436	ProperStrand	3	chr8	129468837	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-10.6897
chr7	125996262	125996286	protein_coding	2310008H09Rik	exon	ENSMUSG00000030980	ProperStrand	42	chr5	112773223	112773283	protein_coding	Hps4	utr5	ENSMUSG00000042328	ProperStrand	27	3	-21.4065
chr8	74008400	74008417	protein_coding	Ano8	exon	ENSMUSG00000034863	NonProperStrand	171	chr3	123210911	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-1.3569
chr4	62174601	62175170	protein_coding	Alad	exon	ENSMUSG00000028393	ProperStrand	10	chr5	130300458	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	9	-21.1940
mmu-miR-6240	6	25	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr6	48409604	48409621	protein_coding	Sspo	exon	ENSMUSG00000029797	ProperStrand	4	1	-11.5429
chr2	90235315	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	138336464	138336481	protein_coding	Pla2g2d	utr3	ENSMUSG00000041202	NonProperStrand	1	1	-inf
chr5	134885065	134885155	protein_coding	Gtf2ird1	exon	ENSMUSG00000023079	ProperStrand	85	chr7	116664794	116664874	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.9698
chr13	22957728	22957818	LINE	L1Md_A	L1	chr13L1Md_A22957288	ProperStrand	1	chr9	19462376	19462456	LINE	L1Md_A	L1	chr9L1Md_A19461964	ProperStrand	81	1	-inf
chr12	55797792	55797890	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	chr11	83107804	83107846	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	3	-8.4061
chr19	7002905	7002921	protein_coding	Kcnk4	intron	ENSMUSG00000024957	NonProperStrand	11	chr8	74184512	74184554	protein_coding	Unc13a	exon	ENSMUSG00000034799	ProperStrand	13	1	-19.4149
chr8	72356624	72356640	protein_coding	Pbx4	exon	ENSMUSG00000031860	NonProperStrand	2	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-15.2057
chr11	120680121	120680225	protein_coding	Fasn	exon	ENSMUSG00000025153	ProperStrand	298	chr5	123622050	123622066	protein_coding	Hpd	exon	ENSMUSG00000029445	ProperStrand	254	2	-11.5862
chr17	65994880	65994897	LTR	ORR1D2	MaLR	chr17ORR1D265994590	NonProperStrand	1	chr9	120039623	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-inf
chr15	82725599	82725637	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	chr7	117189961	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	10	-7.5296
chr11	11721839	11721856	protein_coding	Ddc	intron	ENSMUSG00000020182	ProperStrand	19	chr1	162965531	162965562	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.4761
chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	chr18	73693114	73693137	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-1.8614
chr9	108846176	108846754	protein_coding	Uqcrc1	exon	ENSMUSG00000025651	ProperStrand	43	chr18	83157275	83157329	protein_coding	Zfp516	exon	ENSMUSG00000058881	ProperStrand	25	4	-inf
chr7	51869754	51870747	protein_coding	Myh14	exon	ENSMUSG00000030739	ProperStrand	29	chr16	23111758	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-8.0579
chr2	155841347	155841438	protein_coding	Ergic3	intron	ENSMUSG00000005881	ProperStrand	15	chr8	129468779	129468859	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	2	-11.5847
chr1	162272268	162322315	protein_coding	Rabgap1l	exon	ENSMUSG00000026721	ProperStrand	44	chr7	52382234	52382301	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-8.9059
chr5	111137195	111137295	protein_coding	Ep400	exon	ENSMUSG00000029505	ProperStrand	176	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-0.8076
chr4	144758457	144758474	protein_coding	Vps13d	exon	ENSMUSG00000020220	ProperStrand	59	chr9	96976776	96976825	protein_coding	Slc25a36	utr3	ENSMUSG00000032449	ProperStrand	159	1	-11.3913
chr1	192765134	192766039	protein_coding	Angel2	exon	ENSMUSG00000026634	ProperStrand	23	chr16	18240811	18240901	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	1	-11.0644
chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	chr2	130101973	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	2	-3.1700
chr7	114029422	114029439	protein_coding	Olfr706	exon	ENSMUSG00000043599	ProperStrand	1	chr1	162968442	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-inf
chr17	34324656	34324673	protein_coding	Psmb9	utr5	ENSMUSG00000024337	ProperStrand	60	chr16	23111776	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.9032
chr11	51051367	51051457	LINE	Lx5	L1	chr11Lx551051330	NonProperStrand	1	chr3	96218394	96218474	misc_RNA	Telomerase-vert	.	ENSMUSG00000064796	ProperStrand	443	1	-inf
chr17	17484036	17484126	LINE	L1VL2	L1	chr17L1VL217483700	NonProperStrand	1	chr16	23111378	23111458	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-inf
chr6	97253835	97253854	protein_coding	Frmd4b	intron	ENSMUSG00000030064	NonProperStrand	25	chr7	132604619	132604692	protein_coding	Jmjd5	exon	ENSMUSG00000030752	ProperStrand	4	1	-19.5900
chr18	34983125	34983206	protein_coding	Kdm3b	exon	ENSMUSG00000038773	ProperStrand	80	chr19	8800110	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-7.0356
chr13	55105923	55105939	protein_coding	Unc5a	exon	ENSMUSG00000025876	NonProperStrand	96	chr2	26493426	26493500	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-2.8886
chr5	122919775	122921218	protein_coding	Atp2a2	exon	ENSMUSG00000029467	ProperStrand	166	chr2	158182210	158182290	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-3.0969
chr2	163924174	163924240	protein_coding	Stk4	exon	ENSMUSG00000018209	ProperStrand	20	chr16	95923943	95923959	protein_coding	Ets2	utr5	ENSMUSG00000022895	ProperStrand	3	1	-inf
chr6	115757992	115758122	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr5	121655016	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	18	-3.1719
chr7	52378398	52378459	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	chr6	124665421	124665521	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	1	-2.4067
chr11	29642583	29642610	protein_coding	Rtn4	utr3	ENSMUSG00000020458	ProperStrand	117	chr5	111121110	111121200	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	2	-8.4281
chr6	136512289	136512350	protein_coding	Atf7ip	exon	ENSMUSG00000030213	ProperStrand	22	chr12	88488443	88496424	protein_coding	Pomt2	exon	ENSMUSG00000034126	NonProperStrand	331	1	-11.9227
chr6	120432385	120432401	protein_coding	Il17ra	exon	ENSMUSG00000002897	ProperStrand	61	chr5	121655099	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.7168
chr13	55423061	55423161	protein_coding	Rab24	utr5	ENSMUSG00000034789	ProperStrand	5	chr7	67125763	67125825	snoRNA	ENSMUSG00000089375_Snord107	.	ENSMUSG00000089375	ProperStrand	451	1	-14.4384
chrX	6951555	6951571	protein_coding	Usp27x	exon	ENSMUSG00000046269	NonProperStrand	36	chr7	4980629	4980664	protein_coding	Zfp865	exon	ENSMUSG00000074405	ProperStrand	15	1	-17.1846
chr8	77593657	77593673	protein_coding	Tom1	utr3	ENSMUSG00000042870	ProperStrand	30	chr11	6428141	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.4908
chr9	65127126	65127142	protein_coding	Cilp	exon	ENSMUSG00000042254	ProperStrand	212	chr4	131865379	131865417	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-1.8000
chr9	62631453	62631474	protein_coding	Itga11	utr3	ENSMUSG00000032243	ProperStrand	7	chr5	121655016	121655111	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-8.0440
chr11	97642958	97643090	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	chr1	173041632	173041649	tRNA	tRNA710-ValCAC	.	13711	ProperStrand	206	4	-3.6326
chr14	119693352	119693368	protein_coding	Hs6st3	intron	ENSMUSG00000053465	NonProperStrand	134	chr2	29872783	29873902	protein_coding	Spna2	exon	ENSMUSG00000057738	ProperStrand	222	1	-9.0789
chr2	25443053	25443111	protein_coding	B230208H17Rik	exon	ENSMUSG00000015087	ProperStrand	25	chr19	8800356	8800446	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-5.2030
chr5	67696734	67696814	LTR	RLTR19B	ERVK	chr5RLTR19B67696691	ProperStrand	1	chr6	129387648	129387738	protein_coding	Clec1a	intron	ENSMUSG00000033082	ProperStrand	11	1	-inf
chr9	110280864	110281083	protein_coding	Scap	exon	ENSMUSG00000032485	ProperStrand	37	chr2	11684517	11684536	protein_coding	Fbxo18	exon	ENSMUSG00000058594	ProperStrand	6	1	-18.2174
chr7	30231467	30231593	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	chr2	32076954	32076986	protein_coding	Prrc2b	exon	ENSMUSG00000039262	ProperStrand	344	1	-5.3941
chr17	32923354	32923438	protein_coding	Zfp871	intron	ENSMUSG00000024298	ProperStrand	3	chr16	23111392	23111482	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-6.9982
chr18	61874575	61874633	protein_coding	Grpel2	utr3	ENSMUSG00000024580	ProperStrand	27	chr5	132213625	132213642	protein_coding	Auts2	intron	ENSMUSG00000029673	ProperStrand	71	1	-14.5987
chr17	4082649	4082739	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr7	54443898	54443971	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	12	-inf
chr4	122968600	122968662	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	chr4	122970392	122970463	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-1.0788
chr4	106743226	106743254	protein_coding	Cyb5rl	intron	ENSMUSG00000028621	ProperStrand	2	chr14	49646684	49646721	protein_coding	Exoc5	intron	ENSMUSG00000061244	ProperStrand	1	1	-inf
chr2	181669347	181669437	LTR	MTA_Mm	MaLR	chr2MTA_Mm181669067	ProperStrand	1	chr18	9877486	9877576	protein_coding	Colec12	utr3	ENSMUSG00000036103	NonProperStrand	10	1	-inf
chr2	25289272	25289516	protein_coding	Abca2	exon	ENSMUSG00000026944	ProperStrand	57	chr3	123210956	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.1502
chr16	32386987	32387004	protein_coding	Ubxn7	utr3	ENSMUSG00000053774	ProperStrand	30	chr3	96066922	96066953	protein_coding	Hist2h4	exon	ENSMUSG00000091405	ProperStrand	18	1	-17.1461
chr2	84534779	84534819	protein_coding	Zdhhc5	exon	ENSMUSG00000034075	ProperStrand	20	chr5	39098078	39098113	protein_coding	Clnk	intron	ENSMUSG00000039315	NonProperStrand	3	2	-inf
chr4	126423168	126423258	protein_coding	Ncdn	intron	ENSMUSG00000028833	ProperStrand	35	chr7	148634702	148634782	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	25	-inf
chr15	77601638	77602292	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr4	122968664	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-2.1099
chr1	90171627	90173848	protein_coding	Hjurp	exon	ENSMUSG00000044783	ProperStrand	110	chr5	145532339	145532394	protein_coding	Trrap	intron	ENSMUSG00000045482	ProperStrand	399	1	-8.3055
chr4	131865901	131865986	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr17	35384119	35384187	snoRNA	ENSMUSG00000065273_SNORD83	.	ENSMUSG00000065273	ProperStrand	244	3	-1.0255
chr1	59755245	59757729	protein_coding	Nop58	exon	ENSMUSG00000026020	ProperStrand	104	chr2	26494708	26494808	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.1578
chr11	69592791	69592807	protein_coding	Zbtb4	exon	ENSMUSG00000018750	NonProperStrand	5	chr7	116664793	116664863	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-7.4478
chr8	59992813	59992913	protein_coding	Hmgb2	exon	ENSMUSG00000054717	ProperStrand	184	chr1	162965536	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.4229
chr11	83138168	83146497	protein_coding	Ap2b1	exon	ENSMUSG00000035152	ProperStrand	60	chr7	52382752	52382817	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-6.7519
chr10	4997461	4997477	protein_coding	Syne1	exon	ENSMUSG00000019769	NonProperStrand	8	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.4974
chr8	107423013	107423093	LINE	L1Md_T	L1	chr8L1Md_T107422643	ProperStrand	1	chr7	54441764	54441854	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-inf
chr11	54537092	54553754	protein_coding	Cdc42se2	exon	ENSMUSG00000052298	ProperStrand	9	chr2	26768393	26768433	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-9.4464
chr10	116508398	116508488	protein_coding	Frs2	utr3	ENSMUSG00000020170	ProperStrand	10	chr16	23110492	23110572	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.8693
chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	1	-8.4438
chr5	100467590	100467637	protein_coding	Hnrpdl	intron	ENSMUSG00000029328	ProperStrand	39	chr16	23110965	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.5380
chr3	121157240	121157324	protein_coding	Cnn3	intron	ENSMUSG00000053931	ProperStrand	77	chr7	52381973	52382013	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	2	-10.0846
chr16	91925843	91925870	protein_coding	Atp5o	exon	ENSMUSG00000022956	ProperStrand	37	chr7	133592210	133592226	protein_coding	Atp2a1	exon	ENSMUSG00000030730	ProperStrand	49	1	-14.7018
chr14	60861306	60861396	protein_coding	Nupl1	intron	ENSMUSG00000063895	ProperStrand	16	chr11	62418047	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-8.2040
chr18	35714123	35714203	lincRNA	Snhg4	intron	ENSMUSG00000090430	ProperStrand	270	chrX	7307463	7307553	protein_coding	Praf2	utr3	ENSMUSG00000031149	ProperStrand	9	1	-14.1884
chr1	168131714	168131730	protein_coding	Mael	exon	ENSMUSG00000040629	NonProperStrand	4	chr5	121655016	121655099	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-9.2889
chr10	88905239	88905328	protein_coding	Gas2l3	intron	ENSMUSG00000074802	ProperStrand	16	chr2	26768381	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-8.2494
chr9	78326660	78326794	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr5	23825941	23825957	protein_coding	Kcnh2	exon	ENSMUSG00000038319	ProperStrand	242	1	-3.6547
chr5	108333572	108333621	snoRNA	ENSMUSG00000064453_Snord21	.	ENSMUSG00000064453	ProperStrand	201	chr9	15118347	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-1.4465
chr19	7292000	7292034	protein_coding	Cox8a	utr5	ENSMUSG00000035885	NonProperStrand	1	chr4	131866152	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	NonProperStrand	19	1	-inf
chr11	78150285	78150301	protein_coding	Pigs	exon	ENSMUSG00000041958	NonProperStrand	138	chr5	151755615	151755632	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-6.0901
chr14	20598051	20598114	protein_coding	Nid2	exon	ENSMUSG00000021806	ProperStrand	372	chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	1	-5.7791
chr4	150538028	150538044	protein_coding	Camta1	exon	ENSMUSG00000014592	ProperStrand	170	chr15	81170410	81170456	protein_coding	Slc25a17	exon	ENSMUSG00000022404	ProperStrand	38	1	-12.1461
chr8	77742558	77742574	protein_coding	Rasd2	exon	ENSMUSG00000034472	NonProperStrand	237	chr8	46036301	46036354	protein_coding	Fat1	exon	ENSMUSG00000070047	ProperStrand	306	1	-7.3067
chr15	98674741	98674841	protein_coding	Mll2	exon	ENSMUSG00000048154	ProperStrand	170	chr2	130102086	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-3.3845
chr19	11850053	11850072	protein_coding	Stx3	utr3	ENSMUSG00000041488	NonProperStrand	5	chr11	116938557	116938647	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-11.2944
chrX	141919212	141919229	protein_coding	Amot	intron	ENSMUSG00000041688	NonProperStrand	8	chr12	70475724	70475798	protein_coding	Arf6	utr3	ENSMUSG00000044147	ProperStrand	32	1	-18.1730
chr9	45198928	45199653	protein_coding	Fxyd6	exon	ENSMUSG00000066705	NonProperStrand	108	chr4	131865855	131865902	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.9473
chr11	3879007	3879055	protein_coding	Pes1	utr3	ENSMUSG00000020430	ProperStrand	49	chr16	23110454	23110556	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.8132
chr19	41194749	41194765	protein_coding	Tll2	exon	ENSMUSG00000025013	NonProperStrand	4	chr19	30969167	30969184	protein_coding	Prkg1	exon	ENSMUSG00000052920	NonProperStrand	41	1	-22.0881
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr13	90238585	90238635	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	1	-2.5202
chr14	57380793	57380812	protein_coding	Pspc1	exon	ENSMUSG00000021938	ProperStrand	11	chr4	116862601	116862662	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	1	-12.3049
chr10	13367077	13367119	protein_coding	Aig1	utr3	ENSMUSG00000019806	ProperStrand	49	chr16	26680323	26692878	protein_coding	Il1rap	exon	ENSMUSG00000022514	ProperStrand	3	3	-inf
chr12	76689081	76689098	protein_coding	Ppp2r5e	intron	ENSMUSG00000021051	NonProperStrand	12	chr11	68886974	68887038	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-7.3320
chr7	117189944	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	chr16	20684338	20684387	snoRNA	ENSMUSG00000077239_Snord66	.	ENSMUSG00000077239	ProperStrand	159	4	-6.6913
chr3	135111883	135111973	protein_coding	Ube2d3	intron	ENSMUSG00000078578	ProperStrand	34	chr1	162965980	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-7.7805
chr4	55431651	55431667	lincRNA	Gm12505	exon	ENSMUSG00000087070	ProperStrand	447	chr1	63225577	63225652	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-2.8552
chr17	23955821	23955837	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	chr11	68874381	68874398	protein_coding	2310047M10Rik	utr3	ENSMUSG00000045176	ProperStrand	7	1	-15.9094
chr10	75398707	75399040	protein_coding	Mmp11	intron	ENSMUSG00000000901	ProperStrand	24	chr17	39985458	39985500	pseudogene	AY036118	.	ENSMUSG00000045999	ProperStrand	57	1	-15.2607
chr4	132530098	132530116	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	chr12	110918156	110918221	snoRNA	ENSMUSG00000065749_AF357428	.	ENSMUSG00000065749	ProperStrand	218	2	-11.2947
chr9	43921925	43921942	lincRNA	Gm3906	intron	ENSMUSG00000092003	NonProperStrand	41	chr10	23505192	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-3.3013
chr12	17552962	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr11	48616661	48616705	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	1	-1.5772
chr4	135363101	135363118	protein_coding	Myom3	exon	ENSMUSG00000037139	ProperStrand	3	chr15	75828058	75828074	protein_coding	Mapk15	exon	ENSMUSG00000063704	NonProperStrand	14	1	-inf
chr8	108726149	108726178	protein_coding	Slc7a6os	exon	ENSMUSG00000033106	ProperStrand	9	chr7	116664823	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-6.1874
chr8	108469585	108469630	protein_coding	Slc12a4	exon	ENSMUSG00000017765	ProperStrand	25	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-9.4906
chr3	87895483	87895499	protein_coding	Iqgap3	exon	ENSMUSG00000028068	ProperStrand	16	chr11	69483195	69483221	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.9072
chr1	72877179	72877279	protein_coding	Igfbp2	intron	ENSMUSG00000039323	ProperStrand	406	chr18	75161534	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-3.5141
chr19	39009804	39009884	protein_coding-noncoding	Hells	utr5	ENSMUSG00000025001	ProperStrand	6	chr19	39009942	39010032	protein_coding	Hells	exon	ENSMUSG00000025001	ProperStrand	23	1	-18.3661
chr1	162967755	162967783	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	chr18	35714154	35714260	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-0.9976
chr3	88497871	88497971	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	chr12	106269290	106269443	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	13	-10.6908
chr5	114293329	114293395	protein_coding	Coro1c	utr3	ENSMUSG00000004530	ProperStrand	44	chr5	105376097	105376116	protein_coding	Abcg3	intron	ENSMUSG00000029299	NonProperStrand	5	2	-19.9864
chr9	57644382	57644482	protein_coding	Arid3b	exon	ENSMUSG00000004661	ProperStrand	39	chr1	162965562	162965582	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.0770
chr11	86046725	86048188	protein_coding	Ints2	exon	ENSMUSG00000018068	ProperStrand	17	chr14	61398407	61398423	protein_coding	C1qtnf9	exon	ENSMUSG00000071347	ProperStrand	187	1	-13.5969
chr4	72814254	72814344	LINE	Lx3B	L1	chr4Lx3B72814072	ProperStrand	1	chr4	72813888	72813968	SINE	B3	B2	chr4B372813804	ProperStrand	1	1	-inf
chr7	104835868	104835884	protein_coding	Rsf1	utr3	ENSMUSG00000035623	ProperStrand	48	chr17	35088971	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-6.3080
chr6	18155278	18155297	protein_coding	Cftr	intron	ENSMUSG00000041301	NonProperStrand	8	chr5	121655016	121655065	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-7.7589
chr2	180234731	180234748	protein_coding	Ntsr1	utr5	ENSMUSG00000027568	NonProperStrand	17	chr3	30949195	30949248	protein_coding	Prkci	utr3	ENSMUSG00000037643	ProperStrand	39	1	-16.7014
chr13	21845478	21845587	protein_coding	Hist1h2ak	exon	ENSMUSG00000063021	ProperStrand	30	chr11	68887023	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	2	-9.0063
chr9	57427261	57428594	protein_coding	Scamp2	exon	ENSMUSG00000040188	ProperStrand	12	chr6	124691242	124691303	protein_coding	Grcc10	utr5	ENSMUSG00000072772	ProperStrand	88	2	-19.2514
chr10	127929669	127929767	protein_coding	Myl6	exon	ENSMUSG00000090841	ProperStrand	22	chr5	130295445	130295494	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	2	-11.6738
chr1	120738704	120740945	protein_coding	Gli2	exon	ENSMUSG00000048402	ProperStrand	148	chr7	116664823	116664868	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.1544
chr14	70718532	70718632	protein_coding	Slc39a14	exon	ENSMUSG00000022094	ProperStrand	17	chr11	69483136	69483178	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.7874
chr14	63761118	63761145	protein_coding	Ctsb	exon	ENSMUSG00000021939	ProperStrand	48	chr4	131908236	131908354	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.7522
chr5	74489265	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr4	124767989	124768025	protein_coding	Meaf6	intron	ENSMUSG00000028863	ProperStrand	6	1	-10.3398
chr3	156224612	156224628	lincRNA	4930570G19Rik	exon	ENSMUSG00000085084	ProperStrand	326	chr12	113883263	113885049	protein_coding	Siva1	exon	ENSMUSG00000064326	ProperStrand	7	1	-14.3584
chr13	60862002	60862021	protein_coding	Dapk1	exon	ENSMUSG00000021559	NonProperStrand	40	chr17	24857737	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	24	-19.6801
chr5	31546170	31546201	protein_coding	Nrbp1	exon	ENSMUSG00000029148	ProperStrand	10	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-11.3948
chr14	31953025	31953118	protein_coding	Stab1	exon	ENSMUSG00000042286	NonProperStrand	127	chr7	34927761	34927802	protein_coding	Uba2	exon	ENSMUSG00000052997	ProperStrand	165	1	-9.7787
chr17	24856728	24856771	antisense	Snhg9	.	ENSMUSG00000090101	ProperStrand	218	chr2	26494708	26494816	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-2.0850
chr1	121318633	121318755	protein_coding	Inhbb	utr5	ENSMUSG00000037035	ProperStrand	10	chr2	153050783	153050799	protein_coding	Tspyl3	exon	ENSMUSG00000074671	ProperStrand	228	1	-14.3002
chr2	129514062	129514080	protein_coding	Pdyn	exon	ENSMUSG00000027400	ProperStrand	2	chr17	35088965	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-13.2951
chr12	109345120	109345179	protein_coding	Setd3	utr3	ENSMUSG00000056770	ProperStrand	21	chr5	111121091	111121181	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-8.5409
chr11	69401066	69401117	protein_coding	Trp53	exon	ENSMUSG00000059552	ProperStrand	47	chr15	77275961	77275978	protein_coding	Apol7b	intron	ENSMUSG00000068252	ProperStrand	2	1	-inf
chr10	127560606	127560660	protein_coding	Baz2a	exon	ENSMUSG00000040054	ProperStrand	274	chr3	88497856	88497946	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	2	-7.4559
chr1	155141395	155141411	protein_coding	Lamc1	intron	ENSMUSG00000026478	NonProperStrand	12	chr4	131865856	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.6729
chr14	19101766	19101814	protein_coding	Rpl15	exon	ENSMUSG00000012405	ProperStrand	145	chr2	156368119	156368136	protein_coding	Epb4.1l1	utr3	ENSMUSG00000027624	ProperStrand	27	2	-20.5401
chr4	120641742	120641768	protein_coding	Smap2	utr3	ENSMUSG00000032870	ProperStrand	13	chr16	23110913	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-4.2316
chr11	5180669	5180685	protein_coding	Znrf3	utr3	ENSMUSG00000041961	NonProperStrand	210	chr3	153574604	153574654	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	1	-7.1758
chr3	96594319	96594367	protein_coding	Rnf115	utr3	ENSMUSG00000028098	ProperStrand	46	chr8	129468746	129468780	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-4.9248
chr11	59300209	59300253	protein_coding	Zkscan17	utr3	ENSMUSG00000020472	ProperStrand	23	chr16	23110907	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.4133
chr1	129092223	129092303	Simple_repeat	(TG)n	Simple_repeat	chr1(TG)n129092165	NonProperStrand	1	chr3	97021389	97021479	protein_coding	Bcl9	intron	ENSMUSG00000038256	ProperStrand	94	1	-inf
chr6	115757992	115758099	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr19	8799583	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	3	-1.3846
chr11	87579357	87579374	protein_coding	Bzrap1	exon	ENSMUSG00000034156	ProperStrand	21	chr10	66730610	66730628	protein_coding	Nrbf2	exon	ENSMUSG00000075000	ProperStrand	3	1	-inf
chr3	135268102	135268121	protein_coding	Nfkb1	exon	ENSMUSG00000028163	ProperStrand	55	chr6	83111671	83111687	protein_coding	1700003E16Rik	exon	ENSMUSG00000030030	ProperStrand	352	1	-9.9436
chr12	72237211	72237301	protein_coding	Timm9	intron	ENSMUSG00000021079	ProperStrand	3	chr12	72251867	72251957	protein_coding	2700049A03Rik	intron	ENSMUSG00000034601	ProperStrand	21	1	-20.8842
chr2	153229071	153229171	protein_coding	Asxl1	utr3	ENSMUSG00000042548	ProperStrand	76	chr18	35102297	35102334	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-6.1232
chr17	35272237	35272253	protein_coding	Bag6	utr5	ENSMUSG00000024392	ProperStrand	181	chr19	43598463	43598548	protein_coding	Got1	intron	ENSMUSG00000025190	ProperStrand	32	1	-12.3693
chr16	10424251	10424351	protein_coding	Fam18a	intron	ENSMUSG00000050908	ProperStrand	1	chr7	116664872	116664911	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	NonProperStrand	12	1	-inf
chr7	52958453	52958469	protein_coding	Car11	exon	ENSMUSG00000003273	NonProperStrand	250	chr18	73693122	73693148	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-2.8490
chr4	131866176	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	chr2	26766780	26766809	snoRNA	ENSMUSG00000065258_SNORD24	.	ENSMUSG00000065258	ProperStrand	130	5	-10.8866
chr5	89383967	89457318	protein_coding	Slc4a4	exon	ENSMUSG00000060961	NonProperStrand	195	chr9	120037992	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-2.5445
chr15	79943750	79943773	protein_coding	Syngr1	utr3	ENSMUSG00000022415	ProperStrand	51	chr7	117189864	117189954	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	14	-inf
chr10	121242090	121244926	protein_coding	Srgap1	exon	ENSMUSG00000020121	NonProperStrand	80	chr18	35716763	35716791	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.7116
chr4	118804806	118805065	protein_coding	Slc2a1	exon	ENSMUSG00000028645	ProperStrand	361	chr19	8800355	8800411	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	4	-3.7582
chr17	28450697	28450714	protein_coding	Fance	utr5	ENSMUSG00000007570	ProperStrand	23	chr11	116106867	116106940	protein_coding	Srp68	utr3	ENSMUSG00000020780	ProperStrand	42	1	-15.9462
chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	2	-3.8048
chr14	121346205	121346255	protein_coding	Ipo5	utr3	ENSMUSG00000030662	ProperStrand	135	chr14	31827478	31827515	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-5.3507
chrX	156315499	156315519	protein_coding	Sh3kbp1	intron	ENSMUSG00000040990	ProperStrand	67	chr4	131866160	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-3.4615
chr11	6428077	6428156	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr12	60774058	60774112	snoRNA	ENSMUSG00000077603_SNORA3	.	ENSMUSG00000077603	ProperStrand	185	1	-1.3492
chr12	100434805	100434843	protein_coding	Foxn3	exon	ENSMUSG00000033713	ProperStrand	74	chr2	26768395	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-5.1927
chr8	108210267	108210284	protein_coding	Rltpr	intron	ENSMUSG00000050357	NonProperStrand	22	chr1	24621344	24621379	protein_coding	Gm10925	utr3	ENSMUSG00000090378	ProperStrand	320	1	-11.9910
chr11	80965641	80965658	protein_coding	Accn1	exon	ENSMUSG00000020704	NonProperStrand	228	chr5	131915994	131916050	protein_coding	Auts2	exon	ENSMUSG00000029673	ProperStrand	71	1	-10.2980
chr9	69310913	69310931	protein_coding	Anxa2	intron	ENSMUSG00000032231	ProperStrand	43	chr3	68889148	68889212	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	5	-16.1600
chr12	100626727	100626743	protein_coding	Foxn3	exon	ENSMUSG00000033713	ProperStrand	74	chr10	79517841	79517862	protein_coding	Gpx4	exon	ENSMUSG00000075706	ProperStrand	55	1	-13.0678
chr17	32358976	32359056	protein_coding	Brd4	exon	ENSMUSG00000024002	ProperStrand	121	chr7	26102659	26111435	protein_coding	Megf8	exon	ENSMUSG00000045039	ProperStrand	100	1	-10.8783
chr17	35299506	35299596	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	NonProperStrand	14	chr10	23505153	23505233	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	NonProperStrand	45	1	-16.9247
chr7	25757322	25757587	protein_coding	Rabac1	exon	ENSMUSG00000003380	ProperStrand	19	chr4	131908236	131908276	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-5.7801
chr2	128498231	128498249	protein_coding	Anapc1	intron	ENSMUSG00000014355	NonProperStrand	5	chr19	8963027	8963081	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-7.1260
chr15	76200668	76200785	protein_coding	Fam203a	exon	ENSMUSG00000022554	ProperStrand	13	chr3	123210854	123210919	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-4.8751
chr14	73674205	73674278	protein_coding	Rb1	intron	ENSMUSG00000022105	ProperStrand	67	chr4	41158543	41158574	snoRNA	ENSMUSG00000089308_SNORD121A	.	ENSMUSG00000089308	ProperStrand	209	1	-10.5882
chr15	76432843	76433000	protein_coding	Cpsf1	exon	ENSMUSG00000034022	ProperStrand	127	chr7	80592426	80594109	protein_coding	Chd2	exon	ENSMUSG00000078671	ProperStrand	69	18	-20.0975
chr11	106362556	106362597	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	chr3	108357255	108357358	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	5	-2.5019
chr17	92440259	92440276	LTR	RLTR10-int	ERVK	chr17RLTR10-int92439655	NonProperStrand	4	chrX	34622906	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-14.2816
chr7	114873382	114881373	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	ProperStrand	11	chr8	32260335	32260406	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	4	-19.9503
chr14	78922496	78936578	protein_coding	Akap11	utr5	ENSMUSG00000022016	ProperStrand	44	chr7	142899262	142899352	protein_coding	Mki67	exon	ENSMUSG00000031004	ProperStrand	286	1	-10.8083
chr1	71665162	71665219	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr10	61325507	61325524	protein_coding	Col13a1	exon	ENSMUSG00000058806	ProperStrand	120	1	-6.4574
chr3	90282499	90291487	protein_coding	Ilf2	exon	ENSMUSG00000001016	ProperStrand	28	chr16	23110837	23110901	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-5.2588
chr18	25361887	25361904	protein_coding	AW554918	intron	ENSMUSG00000033632	ProperStrand	23	chr1	88252836	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-8.5640
chr7	52703631	52703662	protein_coding	Gys1	exon	ENSMUSG00000003865	ProperStrand	28	chr14	76247753	76247825	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-9.2600
chr5	77344212	77344292	protein_coding	Ppat	utr3	ENSMUSG00000029246	ProperStrand	55	chr8	73419683	73419773	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.2879
chr11	101466254	101466351	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	chr15	79908958	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	3	-4.4018
chr1	89270584	89270640	protein_coding	Gigyf2	exon	ENSMUSG00000048000	ProperStrand	128	chr16	23111777	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-0.8482
chrX	71517833	71517951	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	chr2	32818806	32818936	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	3	-1.1480
chr16	16323855	16324068	protein_coding	Dnm1l	exon	ENSMUSG00000022789	NonProperStrand	38	chr14	77424372	77424388	protein_coding	9030625A04Rik	utr3	ENSMUSG00000044350	NonProperStrand	152	1	-12.3707
chr8	55613767	55615157	antisense	Spcs3	.	ENSMUSG00000054408	ProperStrand	30	chr11	51551280	51551353	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	1	-9.0926
chr5	100466940	100466997	protein_coding	Hnrpdl	exon	ENSMUSG00000029328	ProperStrand	39	chr5	34234246	34234262	protein_coding	Whsc1	utr5	ENSMUSG00000057406	ProperStrand	409	3	-19.8991
chr7	54106420	54107318	protein_coding	Ldha	exon	ENSMUSG00000063229	ProperStrand	280	chr2	130102000	130102091	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-2.5039
chr12	4295060	4295132	protein_coding	Ncoa1	exon	ENSMUSG00000020647	ProperStrand	38	chr16	23110905	23110995	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	8	-10.9100
chr17	88077661	88077677	protein_coding	Msh2	exon	ENSMUSG00000024151	ProperStrand	124	chr9	120037910	120037929	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-3.3444
chr4	154795907	154795987	protein_coding	2010015L04Rik	utr3	ENSMUSG00000042233	ProperStrand	5	chr1	168699685	168699775	pseudogene	Gm4954	.	ENSMUSG00000085841	NonProperStrand	1	1	-inf
chr17	47112995	47117314	protein_coding	Ubr2	exon	ENSMUSG00000023977	ProperStrand	172	chr5	130300460	130300544	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-3.0371
chr7	129304185	129305077	protein_coding	Plk1	exon	ENSMUSG00000030867	ProperStrand	146	chr3	88497856	88497936	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	2	-9.2993
chr6	30162058	30162074	protein_coding	Ube2h	utr3	ENSMUSG00000039159	ProperStrand	96	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-8.4283
chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	chr4	116827119	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-2.1663
chr17	80604549	80604595	protein_coding	Srsf7	intron	ENSMUSG00000024097	ProperStrand	31	chr4	131865443	131865461	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-5.2733
chr14	51427292	51427392	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr2	166890502	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-1.8578
chr9	59513062	59526770	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr7	117166835	117190351	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	3	-2.9040
chr15	36529192	36529228	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr14	31827478	31827545	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-1.9051
chr2	90235297	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr15	76057576	76057594	protein_coding	Plec	intron	ENSMUSG00000022565	NonProperStrand	1	1	-inf
chr9	20693945	20693998	snoRNA	ENSMUSG00000077702_SNORD105	.	ENSMUSG00000077702	ProperStrand	41	chr11	69483237	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.1191
chr5	116872766	116872846	protein_coding	Hspb8	utr5	ENSMUSG00000041548	NonProperStrand	7	chr17	24857734	24857824	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	NonProperStrand	27	1	-20.1338
chr9	22047368	22047395	protein_coding	Zfp809	intron	ENSMUSG00000057982	ProperStrand	10	chr18	35716762	35716829	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-9.1880
chr6	88053667	88053741	protein_coding	Rpn1	utr3	ENSMUSG00000030062	ProperStrand	58	chr11	100181329	100181403	protein_coding	Eif1	utr5	ENSMUSG00000035530	ProperStrand	115	1	-12.0751
chr8	13416895	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr7	29136528	29136653	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	17	-1.0645
chr12	88791471	88791533	protein_coding	Snw1	exon	ENSMUSG00000021039	ProperStrand	36	chr11	6428092	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-10.0872
chr15	98362159	98362249	protein_coding	2310037I24Rik	exon	ENSMUSG00000022992	ProperStrand	91	chr3	153574576	153574656	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	1	-8.8397
chr2	90856417	90856481	protein_coding	Celf1	utr3	ENSMUSG00000005506	ProperStrand	61	chr2	26493398	26493488	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-6.2850
chr11	74718976	74718995	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	chr1	162966821	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-2.2708
chr4	41156526	41156575	protein_coding	Ubap2	exon	ENSMUSG00000028433	ProperStrand	292	chr15	82980092	82980182	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-4.0649
chr6	82999207	82999224	protein_coding	Loxl3	exon	ENSMUSG00000000693	ProperStrand	14	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-10.6922
chr19	5797502	5797580	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr8	108636254	108636344	protein_coding	Nfatc3	intron	ENSMUSG00000031902	ProperStrand	75	14	-inf
chr11	20129298	20129377	protein_coding	Cep68	utr3	ENSMUSG00000044066	ProperStrand	15	chr6	94776851	94776875	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	2	-19.3020
chr6	86475244	86475313	protein_coding	Pcbp1	exon	ENSMUSG00000051695	ProperStrand	108	chr11	69483146	69483236	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.5131
chr2	148700947	148700968	protein_coding	Cst3	exon	ENSMUSG00000027447	ProperStrand	13	chr15	79908959	79909019	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	2	-13.6893
chr5	45841342	45841425	protein_coding	Qdpr	utr5	ENSMUSG00000015806	ProperStrand	3	chr4	131865948	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.6896
chr17	35607429	35607445	protein_coding	H2-Q10	exon	ENSMUSG00000067235	NonProperStrand	2	chr5	74489543	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-11.1084
chr9	21606177	21606193	protein_coding	Dock6	exon	ENSMUSG00000032198	NonProperStrand	30	chr10	107800731	107800836	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	1	-9.4655
chr6	131263022	131263039	protein_coding	Styk1	utr5	ENSMUSG00000032899	NonProperStrand	4	chr1	162965531	162965552	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-8.7752
chr4	137311635	137314557	protein_coding	Alpl	utr5	ENSMUSG00000028766	ProperStrand	80	chr3	85942710	85942776	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	1	-9.1412
chr1	150297623	150297713	LINE	L1_Mur2	L1	chr1L1_Mur2150297417	NonProperStrand	1	chr1	150297021	150297111	LTR	RMER2	ERV1	chr1RMER2150296927	ProperStrand	1	1	-inf
chr17	56739828	56740337	protein_coding	Safb	exon	ENSMUSG00000071054	ProperStrand	79	chr11	106362340	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-5.3047
chr11	87240277	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	chr6	115757992	115758038	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-3.2810
chr3	87718532	87718868	protein_coding	Hdgf	exon	ENSMUSG00000004897	ProperStrand	117	chr1	162967147	162967178	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	1	-7.3474
chr4	99768590	99768680	protein_coding	Ror1	utr5	ENSMUSG00000035305	ProperStrand	8	chr16	23111447	23111499	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.8232
chr7	84832600	84832690	LINE	L1_Mus1	L1	chr7L1_Mus184832517	ProperStrand	1	chr7	84832443	84832534	LINE	L1_Mus4	L1	chr7L1_Mus484830902	ProperStrand	1	1	-inf
chr2	144096189	144096206	protein_coding	Snx5	utr5	ENSMUSG00000027423	NonProperStrand	2	chr16	23110526	23110557	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-9.6327
chr5	108336224	108336251	protein_coding	Rpl5	exon	ENSMUSG00000058558	ProperStrand	235	chr2	130103435	130103501	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	3	-12.5002
chr5	144949527	144949544	SINE	B4	B4	chr5B4144949354	ProperStrand	2	chr4	120564112	120564182	protein_coding	Rims3	utr3	ENSMUSG00000032890	ProperStrand	18	1	-21.6032
chr6	45575716	45575734	protein_coding	Cntnap2	intron	ENSMUSG00000039419	ProperStrand	21	chr14	56159296	56159312	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	1	-13.0688
chr16	4886395	4886411	protein_coding	Mgrn1	exon	ENSMUSG00000022517	NonProperStrand	157	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-3.9921
chr4	134772317	134772391	protein_coding	Clic4	utr3	ENSMUSG00000037242	ProperStrand	84	chr7	52661677	52661693	protein_coding	Kcna7	utr5	ENSMUSG00000038201	ProperStrand	10	1	-16.3615
chr4	79649079	79649123	pseudogene	Gm11407	.	ENSMUSG00000082179	ProperStrand	26	chr7	117189909	117189932	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.9171
chr2	90235301	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	92960818	92960835	protein_coding	Car10	utr5	ENSMUSG00000056158	ProperStrand	25	2	-10.0611
chr11	120675860	120675890	protein_coding	Fasn	exon	ENSMUSG00000025153	ProperStrand	298	chr4	140172843	140172862	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	ProperStrand	15	1	-12.9214
chr4	117559381	117559402	protein_coding-noncoding	Atp6v0b	utr3	ENSMUSG00000033379	ProperStrand	5	chr9	15119697	15119762	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	5	-inf
chr11	32500864	32503675	protein_coding	Stk10	exon	ENSMUSG00000020272	NonProperStrand	73	chr11	59025953	59026040	protein_coding	Arf1	utr3	ENSMUSG00000048076	ProperStrand	52	1	-13.2089
chr17	63672063	63672082	protein_coding	Fbxl17	intron	ENSMUSG00000023965	ProperStrand	14	chr7	116664811	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-5.2856
chr9	78327181	78327245	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr5	102263446	102263463	protein_coding	Wdfy3	utr3	ENSMUSG00000043940	ProperStrand	45	1	-6.9051
chr11	118122638	118122690	protein_coding	Usp36	utr3	ENSMUSG00000033909	ProperStrand	27	chr15	79908929	79908971	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-7.0558
chr18	42731516	42732942	protein_coding	Tcerg1	exon	ENSMUSG00000024498	ProperStrand	210	chr10	62341178	62341199	protein_coding	Tet1	exon	ENSMUSG00000047146	ProperStrand	286	2	-12.2780
chr6	114975423	114982308	protein_coding	1500001M20Rik	exon	ENSMUSG00000030316	ProperStrand	6	chr7	63185445	63185525	protein_coding	Cyfip1	exon	ENSMUSG00000030447	ProperStrand	23	2	-18.5760
chr17	37201626	37204192	protein_coding	Gabbr1	exon	ENSMUSG00000024462	ProperStrand	27	chr19	8963097	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.6995
chr8	112387973	112387989	antisense	Gm17344	.	ENSMUSG00000078143	NonProperStrand	100	mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	1	-4.9088
chr11	116535920	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr19	9052525	9052572	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	2	-4.1438
chr18	75161559	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	chr17	35088971	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	2	-1.4608
chr14	31362470	31362541	protein_coding	Tkt	exon	ENSMUSG00000021957	ProperStrand	160	chr4	135262573	135262673	protein_coding	Il28ra	utr3	ENSMUSG00000062157	ProperStrand	10	1	-15.0159
chr18	38004896	38004937	protein_coding	Diap1	utr3	ENSMUSG00000024456	ProperStrand	77	chr2	127284913	127284930	protein_coding	Kcnip3	intron	ENSMUSG00000079056	ProperStrand	14	1	-15.7957
chr19	8799829	8799882	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	chr2	166889001	166889056	snoRNA	ENSMUSG00000077515_SNORD12	.	ENSMUSG00000077515	ProperStrand	191	1	-2.7977
chr2	11414213	11414229	protein_coding	Pfkfb3	exon	ENSMUSG00000026773	NonProperStrand	7	chr16	23110839	23110867	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.4785
chr16	21981420	21981460	protein_coding	Liph	exon	ENSMUSG00000044626	ProperStrand	13	chr1	89681199	89681289	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-8.5126
chr3	88855929	88855975	protein_coding	Ash1l	exon	ENSMUSG00000028053	ProperStrand	30	chr9	15119733	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.8898
chr19	9088773	9088794	protein_coding	Ahnak	exon	ENSMUSG00000069833	ProperStrand	103	chr11	69481333	69481430	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	4	-8.3355
chr3	94839833	94840575	protein_coding	Psmd4	exon	ENSMUSG00000005625	ProperStrand	20	chr1	162967512	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-9.1870
chr11	53678881	53678898	protein_coding	Slc22a5	utr3	ENSMUSG00000018900	ProperStrand	9	chr2	3428351	3429919	protein_coding	Hspa14	utr5	ENSMUSG00000079615	ProperStrand	14	1	-inf
chr7	107646881	107646951	protein_coding	Ucp2	exon	ENSMUSG00000033685	ProperStrand	54	chr10	90432660	90432676	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	2	-16.9243
chr19	3273021	3274358	protein_coding	Ighmbp2	exon	ENSMUSG00000024831	ProperStrand	4	chr8	124551256	124551309	protein_coding	Banp	utr3	ENSMUSG00000025316	ProperStrand	7	1	-inf
chr2	66343068	66346581	protein_coding	Scn9a	exon	ENSMUSG00000075316	ProperStrand	58	chr1	162965531	162965554	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.3380
chr5	74489211	74489324	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr10	78175101	78175117	protein_coding	Casp14	utr3	ENSMUSG00000005355	ProperStrand	1	1	-inf
mmu-miR-5100	4	20	miRNA	mmu-miR-5100	.	mmu-miR-5100	ProperStrand	132	chr17	24856620	24856740	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	2	-8.0633
chr4	118920583	118920635	protein_coding	Lepre1	exon	ENSMUSG00000028641	ProperStrand	21	chr10	80641694	80641759	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	4	-20.0106
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr4	155366536	155366553	protein_coding	B3galt6	exon	ENSMUSG00000050796	ProperStrand	40	1	-9.4208
chr1	134888559	134897885	protein_coding	Mdm4	utr3	ENSMUSG00000054387	ProperStrand	95	chr7	116664794	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-3.2870
chr13	64469200	64469290	protein_coding	Ctsl	exon	ENSMUSG00000021477	ProperStrand	44	chr9	15119646	15119726	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	5	-13.9600
chr16	57391761	57391792	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr17	22040305	22040355	protein_coding	2210404O09Rik	intron	ENSMUSG00000078546	ProperStrand	4	3	-inf
chr15	100084898	100090289	protein_coding	Atf1	exon	ENSMUSG00000023027	ProperStrand	19	chr15	34370545	34370625	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-5.7679
chr6	28657033	28657071	protein_coding	Snd1	exon	ENSMUSG00000001424	ProperStrand	210	chr5	108336405	108336495	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-4.5114
chr7	134671223	134671242	protein_coding	Srcap	intron	ENSMUSG00000053877	ProperStrand	69	chr4	131908688	131908799	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.0398
chr7	150717298	150717398	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	chr14	63287574	63287611	snoRNA	ENSMUSG00000089531_SNORA73	.	ENSMUSG00000089531	ProperStrand	123	1	-4.1272
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr13	96100551	96100692	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	1	-2.7768
chr1	187149466	187149533	protein_coding	Iars2	exon	ENSMUSG00000026618	ProperStrand	68	chr9	78326545	78326635	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-6.0874
chr7	119253774	119253792	protein_coding	Usp47	utr3	ENSMUSG00000059263	ProperStrand	40	chr19	8799828	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-5.7387
chr15	99329179	99329196	protein_coding	Faim2	utr3	ENSMUSG00000023011	ProperStrand	45	chr15	98350202	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-5.3188
chr5	115782754	115782779	protein_coding	Srsf9	utr3	ENSMUSG00000029538	ProperStrand	19	chr11	69483134	69483262	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-7.6497
chr14	51427259	51427311	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr10	23506278	23506346	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-1.3967
chr13	55105923	55105939	protein_coding	Unc5a	exon	ENSMUSG00000025876	NonProperStrand	96	chr9	78327844	78327890	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-5.4123
chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr11	101321551	101321717	protein_coding	Vat1	exon	ENSMUSG00000034993	ProperStrand	69	1	-6.1782
chr10	127526130	127526205	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr7	31663114	31664217	protein_coding	Cd22	utr5	ENSMUSG00000030577	NonProperStrand	128	1	-7.1563
chr2	129998643	129998713	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr18	35744403	35744432	protein_coding	Matr3	exon	ENSMUSG00000037236	ProperStrand	90	2	-11.7131
chr2	90235304	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	79843543	79843559	protein_coding	Pde1a	intron	ENSMUSG00000059173	NonProperStrand	275	4	-6.9363
chr9	55071254	55071287	protein_coding	Fbxo22	exon	ENSMUSG00000032309	ProperStrand	79	chr1	63225284	63225322	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	1	-8.2854
chr5	76999204	76999240	protein_coding	Exoc1	utr3	ENSMUSG00000036435	ProperStrand	12	chr10	23505151	23505243	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-13.5502
chr14	58465900	58465962	protein_coding	Zdhhc20	intron	ENSMUSG00000021969	ProperStrand	10	chr16	43886794	43886815	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	1	-11.7331
chr5	135628758	135628799	protein_coding	Tbl2	utr5	ENSMUSG00000005374	ProperStrand	28	chr17	46814903	46814951	protein_coding	Klhdc3	exon	ENSMUSG00000063576	ProperStrand	35	3	-20.2825
chr16	37060096	37060186	protein_coding	Polq	utr3	ENSMUSG00000034206	ProperStrand	7	chr14	33005096	33005176	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-8.3069
chr14	121332456	121332527	protein_coding	Ipo5	exon	ENSMUSG00000030662	ProperStrand	135	chr10	110918641	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-3.6756
chr15	88533346	88533442	protein_coding	Brd1	intron	ENSMUSG00000022387	ProperStrand	70	chr16	23111451	23111503	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-4.8477
chr16	57391685	57391743	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr1	162968440	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	NonProperStrand	1	1	-inf
chr3	137628915	137644330	protein_coding	Dapp1	exon	ENSMUSG00000028159	ProperStrand	4	chr1	9932550	9932596	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-13.3965
chr12	105709847	105710209	protein_coding	Gsc	exon	ENSMUSG00000021095	NonProperStrand	12	chr5	108334197	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-8.0381
chr2	122572267	122572357	protein_coding	Pldn	exon	ENSMUSG00000005804	ProperStrand	49	chr11	97642992	97643072	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.8235
chr5	123447391	123447407	lincRNA	A930024E05Rik	exon	ENSMUSG00000056735	ProperStrand	17	chr15	79908930	79908984	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-7.9934
chr18	35716682	35716886	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	chr5	130300416	130300554	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	213	-15.7325
chr15	96201058	96201126	protein_coding	Arid2	exon	ENSMUSG00000033237	ProperStrand	34	chr4	131865855	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-9.7138
chr2	179992552	179992762	protein_coding	Rps21	exon	ENSMUSG00000039001	ProperStrand	46	chr11	98603025	98603043	protein_coding	Thra	intron	ENSMUSG00000058756	ProperStrand	63	1	-13.7555
chr1	137993699	137993950	protein_coding	Cacna1s	exon	ENSMUSG00000026407	NonProperStrand	37	chr19	8963088	8963178	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-5.3875
chr3	142473666	142473756	protein_coding	Pkn2	exon	ENSMUSG00000004591	ProperStrand	28	chr4	131865853	131865933	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.0580
mmu-miR-6238	1	20	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr9	120038551	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	3	-2.9449
chr8	86424786	86455953	protein_coding	Lphn1	utr5	ENSMUSG00000013033	ProperStrand	221	chr10	110918549	110918653	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-2.4743
chr16	3679726	3679816	LINE	Lx	L1	chr16Lx3679641	ProperStrand	1	chr16	3679948	3680038	LTR	IAPEY2_LTR	ERVK	chr16IAPEY2_LTR3679827	ProperStrand	1	1	-inf
chr3	130432189	130433240	protein_coding	Rpl34	utr5	ENSMUSG00000062006	ProperStrand	51	chr16	23110898	23110963	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.0517
chr5	121655059	121655149	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	NonProperStrand	38	chr16	23110905	23110993	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	NonProperStrand	93	1	-13.3567
chr12	77677012	77677028	protein_coding	Plekhg3	exon	ENSMUSG00000052609	ProperStrand	19	chr16	23110828	23110874	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7016
chr3	135268101	135268120	protein_coding	Nfkb1	exon	ENSMUSG00000028163	ProperStrand	55	chr19	42225881	42225897	protein_coding	Marveld1	utr3	ENSMUSG00000044345	NonProperStrand	112	1	-12.2353
chr14	27449530	27449602	protein_coding	Fam116a	utr3	ENSMUSG00000040818	ProperStrand	23	chr3	101182154	101182238	protein_coding	Igsf3	utr5	ENSMUSG00000042035	ProperStrand	73	4	-19.4000
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	69804977	69804993	protein_coding	Gabarap	utr5	ENSMUSG00000018567	ProperStrand	24	2	-10.1869
chr1	136225761	136225778	protein_coding	Ppfia4	exon	ENSMUSG00000026458	ProperStrand	45	chr11	51551381	51551425	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	2	-13.1947
chr2	73747993	73749072	protein_coding	Atp5g3	utr5	ENSMUSG00000018770	ProperStrand	41	chr4	135607570	135607599	protein_coding	Rpl11	exon	ENSMUSG00000059291	ProperStrand	152	1	-12.2162
chr14	51427122	51427342	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr5	147646720	147646848	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	3	-5.8713
chr11	83854976	83854992	protein_coding	Synrg	utr3	ENSMUSG00000034940	NonProperStrand	4	chr16	23111447	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-6.3168
chr15	72268064	72268081	LINE	L1Md_F2	L1	chr15L1Md_F272267157	ProperStrand	1	chr12	3469496	3469512	protein_coding	Asxl2	exon	ENSMUSG00000037486	NonProperStrand	12	1	-inf
chr11	105796301	105796401	protein_coding	Cyb561	utr3	ENSMUSG00000019590	ProperStrand	13	chr9	26566768	26566786	protein_coding	B3gat1	utr3	ENSMUSG00000045994	NonProperStrand	1	1	-inf
chr9	78327896	78328089	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr11	77996557	77996577	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	4	-2.4822
chr2	144366279	144366316	protein_coding	Polr3f	utr3	ENSMUSG00000027427	NonProperStrand	2	chr19	8963027	8963123	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	2	-inf
chr14	63752841	63754463	protein_coding	Ctsb	exon	ENSMUSG00000021939	ProperStrand	48	chr18	35716813	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.5460
chr19	8799021	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	chr5	74489543	74489676	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	12	-1.5898
chr16	33726534	33726550	protein_coding	Heg1	exon	ENSMUSG00000075254	NonProperStrand	37	chr9	15118282	15118381	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-7.3134
chrX	155825121	155825185	protein_coding	Eif1ax	utr3	ENSMUSG00000067194	ProperStrand	18	chr16	23110914	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-5.2074
chr7	34940945	34940961	protein_coding	Uba2	exon	ENSMUSG00000052997	ProperStrand	165	chr9	15118244	15118270	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-1.7401
chr3	87342607	87342632	protein_coding	Etv3	utr3	ENSMUSG00000003382	ProperStrand	7	chr7	141488189	141488207	protein_coding	D7Ertd443e	intron	ENSMUSG00000030994	NonProperStrand	3	1	-inf
chr2	157119950	157120991	protein_coding	Rpn2	exon	ENSMUSG00000027642	ProperStrand	363	chr4	122970404	122970468	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-3.9184
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr5	115698983	115699033	protein_coding	Rnf10	exon	ENSMUSG00000041740	ProperStrand	95	1	-5.4670
chr2	121949511	121949527	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	chr11	98878344	98878457	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	2	-5.8010
chr9	21934462	21934478	protein_coding	Acp5	exon	ENSMUSG00000001348	ProperStrand	66	chr3	68889086	68889146	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-3.0848
chr7	26472435	26472451	protein_coding	Tgfb1	utr5	ENSMUSG00000002603	NonProperStrand	154	chr2	91436311	91436339	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-5.6371
chr2	120872244	120872260	protein_coding	Tgm5	exon	ENSMUSG00000053675	NonProperStrand	163	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.6001
chr8	83233066	83233595	protein_coding	Smarca5	exon	ENSMUSG00000031715	ProperStrand	115	chr2	51968187	51968248	protein_coding	Rif1	exon	ENSMUSG00000036202	ProperStrand	201	27	-19.2761
chr17	46788557	46788647	protein_coding	Cul7	exon	ENSMUSG00000038545	ProperStrand	38	chr16	23111389	23111469	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.9421
chr4	136109730	136109788	protein_coding	Kdm1a	exon	ENSMUSG00000036940	ProperStrand	83	chr4	131866206	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-3.0731
chr13	51743578	51743662	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	chr9	64022896	64022918	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-1.9509
chr5	100855923	100855974	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr16	30514154	30514171	protein_coding	Tmem44	utr3	ENSMUSG00000022537	ProperStrand	217	1	-4.1452
chr11	3649570	3649587	protein_coding	Osbp2	intron	ENSMUSG00000020435	ProperStrand	60	chr9	120039565	120039627	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.3187
chr15	80010735	80010753	protein_coding	Mgat3	intron	ENSMUSG00000042428	ProperStrand	14	chr18	33954899	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-6.3373
chr9	64143802	64143877	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	chr16	43886792	43886849	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	2	-4.8020
chr17	6138911	6138928	protein_coding	Tulp4	exon	ENSMUSG00000034377	ProperStrand	164	chr18	35716763	35716829	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-0.7551
chr17	46709653	46710374	protein_coding	Ptk7	exon	ENSMUSG00000023972	ProperStrand	101	chr2	130101986	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-4.3537
chr4	147992300	147992389	protein_coding	Tardbp	utr3	ENSMUSG00000041459	ProperStrand	120	chr3	68889069	68889149	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-2.0603
chr11	78090769	78092581	protein_coding	2610507B11Rik	exon	ENSMUSG00000010277	ProperStrand	246	chr1	169156466	169156516	protein_coding	Uck2	utr3	ENSMUSG00000026558	ProperStrand	45	1	-11.0639
chr11	69731133	69731421	protein_coding	Eif5a	exon	ENSMUSG00000078812	ProperStrand	164	chr1	162968450	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-4.1371
chr10	127428422	127428438	protein_coding	Hsd17b6	exon	ENSMUSG00000025396	NonProperStrand	68	chr7	134169026	134169126	protein_coding	Maz	utr5	ENSMUSG00000030678	ProperStrand	42	2	-18.8320
chr3	136856024	136856041	LINE	L1_Mus4	L1	chr3L1_Mus4136855983	ProperStrand	8	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-9.9436
chr7	54186415	54186505	protein_coding	Uevld	intron	ENSMUSG00000043262	ProperStrand	23	chr16	23110856	23110936	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.4133
chr7	86606650	86606680	protein_coding	Polg	exon	ENSMUSG00000039176	ProperStrand	93	chr12	110894556	110894621	snoRNA	ENSMUSG00000064417_SNORD113	.	ENSMUSG00000064417	ProperStrand	16	1	-15.1227
chr1	191504258	191504358	protein_coding	Cenpf	exon	ENSMUSG00000026605	ProperStrand	44	chr9	88359536	88359572	protein_coding	Syncrip	exon	ENSMUSG00000032423	ProperStrand	35	1	-15.0376
chr3	78868281	78868363	protein_coding	Rapgef2	utr3	ENSMUSG00000062232	ProperStrand	14	chr1	162965530	162965554	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-6.0900
chr11	8898702	8900125	protein_coding	Hus1	exon	ENSMUSG00000020413	ProperStrand	16	chrX	34622906	34622942	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-5.7063
chr15	98356823	98356913	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	chr16	23109046	23109093	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	5	-10.0714
chr17	34163820	34163997	protein_coding	H2-Ke6	exon	ENSMUSG00000073422	ProperStrand	22	chr1	88247743	88247802	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-7.0846
chr11	69404195	69404776	protein_coding	Trp53	exon	ENSMUSG00000059552	ProperStrand	47	chr4	131908276	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.7849
chr9	83744201	83744301	protein_coding	Ttk	exon	ENSMUSG00000038379	ProperStrand	36	chr16	23111413	23111446	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.0295
chr11	98878383	98878427	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	chr14	31827478	31827518	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	2	-1.6184
chr12	111880382	111881458	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr10	96082656	96082673	protein_coding	Btg1	utr3	ENSMUSG00000036478	ProperStrand	21	1	-10.6757
chr11	116495919	116496009	LTR	RLTR41	ERV1	chr11RLTR41116495865	ProperStrand	1	chr11	116496034	116496124	SINE	RSINE1	B4	chr11RSINE1116496059	NonProperStrand	1	1	-inf
chr12	85292274	85292291	protein_coding	2410016O06Rik	exon	ENSMUSG00000046791	ProperStrand	27	chr19	8798484	8798513	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-6.7897
chrX	132335023	132335044	protein_coding	Gprasp1	exon	ENSMUSG00000043384	ProperStrand	57	chr18	35716748	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	5	-10.8641
chr9	82850192	82850209	protein_coding	Phip	intron	ENSMUSG00000032253	ProperStrand	43	chr1	162965531	162965588	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.8927
chr4	8728556	8732341	protein_coding	Chd7	exon	ENSMUSG00000041235	ProperStrand	80	chr4	131908356	131908429	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.0291
chr15	78724848	78724948	protein_coding	Gga1	utr3	ENSMUSG00000033128	ProperStrand	15	chr4	131908236	131908313	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.7937
chr1	187234113	187235114	protein_coding	Eprs	exon	ENSMUSG00000026615	ProperStrand	149	chr16	23109036	23109090	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	5	-inf
chr11	62270322	62270339	protein_coding	Ncor1	intron	ENSMUSG00000018501	ProperStrand	132	chr1	64782684	64782731	protein_coding	Fzd5	exon	ENSMUSG00000045005	ProperStrand	175	1	-9.5838
chr3	96218359	96218473	misc_RNA	Telomerase-vert	.	ENSMUSG00000064796	ProperStrand	443	chr5	74489607	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	2	-1.3999
chr9	110141719	110141737	protein_coding	Smarcc1	utr3	ENSMUSG00000032481	ProperStrand	108	chr6	71832568	71832687	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	10	-20.1323
chr5	141000555	141000572	protein_coding	Chst12	exon	ENSMUSG00000036599	NonProperStrand	42	chr4	131865855	131865917	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.3470
chr11	60012153	60012174	protein_coding	Rai1	utr3	ENSMUSG00000062115	ProperStrand	25	chr16	23110837	23110927	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.2939
chr4	140881203	140881244	protein_coding	Epha2	intron	ENSMUSG00000006445	ProperStrand	148	chrX	34622917	34622957	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-1.6575
chr8	126888684	126888747	LTR	ORR1A2	MaLR	chr8ORR1A2126888537	ProperStrand	4	chr4	116826697	116826725	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	4	-inf
chr18	89387605	89387621	protein_coding	Cd226	intron	ENSMUSG00000034028	ProperStrand	47	chr16	33625246	33646649	protein_coding	Slc12a8	exon	ENSMUSG00000035506	ProperStrand	52	1	-14.0957
chr13	107737212	107737228	protein_coding	Dimt1	utr5	ENSMUSG00000021692	ProperStrand	185	chr2	130102034	130102087	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-3.2313
chr8	108734812	108734828	protein_coding	Slc7a6os	utr5	ENSMUSG00000033106	NonProperStrand	29	chr15	79908929	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-6.9123
chr2	158182156	158182179	lincRNA	9430008C03Rik	intron	ENSMUSG00000085385	ProperStrand	1039	chr7	112882358	112882516	protein_coding	Rrp8	exon	ENSMUSG00000030888	ProperStrand	8	1	-11.7427
chr6	42626864	42626927	protein_coding	Fam115a	exon	ENSMUSG00000036667	ProperStrand	13	chr19	8799610	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	4	-inf
chr11	4603443	4603463	protein_coding	Uqcr10	intron	ENSMUSG00000059534	ProperStrand	11	chr16	23111741	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-8.3918
chr2	180987033	180987123	protein_coding	Gmeb2	utr3	ENSMUSG00000038705	ProperStrand	10	chr15	34370545	34370625	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-7.0767
chr8	13416897	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr3	53320376	53320494	protein_coding	Frem2	utr3	ENSMUSG00000037016	ProperStrand	28	8	-18.9855
chr1	155754463	155754515	protein_coding	Glul	exon	ENSMUSG00000026473	ProperStrand	54	chr19	8963027	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-6.5172
chr10	79879959	79880062	protein_coding	Tcf3	exon	ENSMUSG00000020167	NonProperStrand	24	chr19	42225881	42225897	protein_coding	Marveld1	utr3	ENSMUSG00000044345	NonProperStrand	112	1	-13.9205
chr4	43505797	43505887	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr2	146125208	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	1	-1.2624
chr4	43505729	43505838	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr2	32817623	32818096	protein_coding	Rpl12	exon	ENSMUSG00000038900	ProperStrand	167	1	-1.3977
chr13	49062762	49062856	protein_coding	Fam120a	exon	ENSMUSG00000038014	ProperStrand	76	chr2	41199972	41199989	protein_coding	Lrp1b	exon	ENSMUSG00000049252	ProperStrand	376	2	-14.5102
chr15	100358955	100358972	protein_coding	Tfcp2	exon	ENSMUSG00000009733	NonProperStrand	77	chr7	148155461	148155520	protein_coding	Ifitm1	exon	ENSMUSG00000025491	ProperStrand	18	1	-15.2434
chr18	82773672	82773688	protein_coding	Zfp236	exon	ENSMUSG00000041258	NonProperStrand	117	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	2	-6.5997
chr4	134926614	134927796	protein_coding	A330049M08Rik	exon	ENSMUSG00000043924	ProperStrand	130	chr7	117190016	117190048	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-1.9985
chr16	23111486	23111505	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr14	76247724	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-1.5167
chr9	83493103	83493193	protein_coding	Sh3bgrl2	utr3	ENSMUSG00000032261	ProperStrand	21	chr11	69483200	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.3745
chr10	116497847	116497876	protein_coding	Cct2	exon	ENSMUSG00000034024	ProperStrand	100	chr10	110918548	110918638	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-2.5402
chr11	80965641	80965658	protein_coding	Accn1	exon	ENSMUSG00000020704	NonProperStrand	228	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-6.7115
chr9	50650840	50650856	protein_coding	Alg9	exon	ENSMUSG00000032059	NonProperStrand	3	chr9	15119287	15119365	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	3	-inf
chr10	121048735	121050280	protein_coding	Xpot	exon	ENSMUSG00000034667	ProperStrand	35	chr7	135915871	135920369	protein_coding	Sec23ip	exon	ENSMUSG00000055319	ProperStrand	27	1	-16.0031
chr7	106754510	106754614	protein_coding	Arrb1	utr3	ENSMUSG00000018909	ProperStrand	46	chr1	89673740	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-3.7530
chr9	114471663	114471763	protein_coding	Trim71	exon	ENSMUSG00000079259	ProperStrand	162	chr1	162966010	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-1.8844
chrX	103621137	103621227	protein_coding	Fndc3c1	exon	ENSMUSG00000033737	ProperStrand	4	chr18	33954845	33954925	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	3	-19.6882
chr3	100727317	100728874	protein_coding	Trim45	exon	ENSMUSG00000033233	ProperStrand	59	chr1	162966814	162966830	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-6.2921
chr4	88053103	88053193	protein_coding	BC057079	exon	ENSMUSG00000038368	ProperStrand	52	chr17	24857740	24857820	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.5398
chrX	12239851	12239910	protein_coding	1810030O07Rik	exon	ENSMUSG00000044148	ProperStrand	6	chr19	8799024	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	4	-19.3431
chr12	17556317	17556377	protein_coding	Odc1	exon	ENSMUSG00000011179	ProperStrand	173	chr7	109830472	109830488	protein_coding	Trim68	intron	ENSMUSG00000073968	ProperStrand	23	1	-13.1299
chr7	35013991	35014367	protein_coding	Gpi1	exon	ENSMUSG00000036427	ProperStrand	288	chr2	26494754	26494834	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-0.7355
chr1	63573774	63573861	protein_coding	Adam23	intron	ENSMUSG00000025964	ProperStrand	59	chr18	35716840	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-3.9363
chr17	13112490	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	chr19	8799585	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	5	-1.5128
chr7	25785638	25785728	protein_coding	Atp1a3	exon	ENSMUSG00000040907	ProperStrand	66	chr3	123210905	123210985	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-5.3313
chr6	145057659	145057679	LTR	RLTR11B	ERVK	chr6RLTR11B145057591	ProperStrand	1	chr13	28843546	28843562	lincRNA	2610307P16Rik	intron	ENSMUSG00000085936	ProperStrand	154	1	-inf
chr3	105265054	105265072	protein_coding	Kcnd3	intron	ENSMUSG00000040896	NonProperStrand	44	chr8	98270005	98270096	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-6.1518
chr7	39050928	39052399	protein_coding	Pop4	exon	ENSMUSG00000030423	ProperStrand	4	chr1	173041632	173041649	tRNA	tRNA710-ValCAC	.	1122087	ProperStrand	206	1	-16.5022
chr10	111422285	111422385	protein_coding	Krr1	utr3	ENSMUSG00000063334	ProperStrand	10	chr7	118219574	118219612	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-7.7388
chr2	26493417	26493497	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr3	96528191	96528281	snoRNA	ENSMUSG00000065669_SNORA5	.	ENSMUSG00000065669	ProperStrand	180	1	-1.8375
chr13	30338191	30338207	protein_coding	Mboat1	utr3	ENSMUSG00000038732	NonProperStrand	148	chr2	26494708	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-2.9752
chr2	90960550	90960567	protein_coding	Mybpc3	exon	ENSMUSG00000002100	NonProperStrand	6	chr11	120675954	120676034	protein_coding	Fasn	exon	ENSMUSG00000025153	ProperStrand	298	1	-14.8511
chrX	71589885	71589906	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr8	129468746	129468819	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	3	-4.7039
chr17	84828439	84828505	protein_coding	Thada	utr3	ENSMUSG00000024251	ProperStrand	47	chr15	79908959	79909010	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	2	-9.6943
chr11	106856634	106856661	protein_coding	Kpna2	intron	ENSMUSG00000018362	ProperStrand	70	chr1	89673690	89673762	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	3	-7.6332
chr11	19827352	19921250	protein_coding	Spred2	intron	ENSMUSG00000045671	ProperStrand	106	chr17	24857740	24857846	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-2.6606
chr17	56761505	56761576	protein_coding	Lonp1	exon	ENSMUSG00000041168	ProperStrand	83	chr7	116664872	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.0079
chr18	36909084	36910798	protein_coding	Ik	exon	ENSMUSG00000024474	ProperStrand	60	chr11	69483195	69483237	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.4498
chrX	148355696	148355896	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	chr1	74622408	74622424	protein_coding	Zfp142	exon	ENSMUSG00000026135	ProperStrand	22	1	-11.0948
chr2	129456390	129456470	protein_coding	Sirpa	utr3	ENSMUSG00000037902	ProperStrand	5	chr2	158185554	158185644	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-11.6274
chr8	90773079	90773130	protein_coding	Papd5	exon	ENSMUSG00000036779	ProperStrand	32	chr4	131908810	131908882	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.1812
chr17	33822215	33822263	protein_coding	Hnrnpm	utr5	ENSMUSG00000059208	ProperStrand	56	chr16	23111384	23111408	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.3551
chr1	95257371	95261505	protein_coding	Ppp1r7	exon	ENSMUSG00000026275	ProperStrand	44	chr7	150717334	150717424	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	6	-25.4432
chr9	61761210	61761287	protein_coding	Rplp1	exon	ENSMUSG00000007892	NonProperStrand	1	chr14	33005139	33005178	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	NonProperStrand	13	1	-inf
chr7	86855790	86855806	protein_coding	9330171B17Rik	exon	ENSMUSG00000039133	ProperStrand	4	chr11	106362586	106362641	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-13.0688
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr11	62416575	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	3	-1.3292
chr7	135049672	135049927	protein_coding	Bckdk	exon	ENSMUSG00000030802	ProperStrand	26	chr17	46917313	46917388	protein_coding	Rpl7l1	intron	ENSMUSG00000063888	ProperStrand	37	1	-15.9630
chr15	62050969	62050987	lincRNA	Pvt1	intron	ENSMUSG00000072566	NonProperStrand	9	chr4	131908389	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.8019
chr1	84790133	84790321	protein_coding	Trip12	exon	ENSMUSG00000026219	ProperStrand	248	chr11	6519861	6519944	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	3	-12.0485
chr3	108200014	108200030	protein_coding	Celsr2	exon	ENSMUSG00000068740	NonProperStrand	20	chr15	98356817	98356901	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	1	-9.9723
chr11	117871883	117871909	protein_coding	Pgs1	intron	ENSMUSG00000017715	ProperStrand	25	chr7	29136555	29136610	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.9451
chr17	25975952	25976052	protein_coding	Rhot2	utr3	ENSMUSG00000025733	ProperStrand	9	chr3	157210059	157210077	protein_coding	Zranb2	utr3	ENSMUSG00000028180	ProperStrand	43	1	-17.8687
chr7	17083210	17083273	protein_coding	Grlf1	exon	ENSMUSG00000058230	ProperStrand	38	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-9.0764
chr11	97397970	97397987	protein_coding	Srcin1	intron	ENSMUSG00000038453	ProperStrand	29	chr11	6428089	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.5563
chr3	100726559	100726577	protein_coding	Trim45	utr5	ENSMUSG00000033233	ProperStrand	59	chr11	6428108	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.2227
chr16	17996325	17996415	Simple_repeat	(GA)n	Simple_repeat	chr16(GA)n17996330	ProperStrand	1	chr8	34677617	34677697	protein_coding	Tex15	intron	ENSMUSG00000009628	NonProperStrand	31	1	-inf
chr1	178754159	178754175	protein_coding	Sdccag8	intron	ENSMUSG00000026504	ProperStrand	54	chr11	53211739	53211805	protein_coding	Aff4	exon	ENSMUSG00000049470	ProperStrand	94	1	-12.6239
chr17	35281222	35281302	protein_coding	Bag6	exon	ENSMUSG00000024392	ProperStrand	181	chr7	36586536	36587931	protein_coding	Zfp507	utr5	ENSMUSG00000044452	ProperStrand	66	1	-10.9066
chr4	55024574	55024648	protein_coding	Zfp462	exon	ENSMUSG00000060206	ProperStrand	37	chr1	162965561	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.1770
chr13	92108621	92108637	protein_coding	Rasgrf2	exon	ENSMUSG00000021708	NonProperStrand	6	chr7	52382752	52382826	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-11.4921
chr2	126942290	126942373	protein_coding	Ncaph	exon	ENSMUSG00000034906	ProperStrand	43	chr2	157387604	157387621	protein_coding	Blcap	intron	ENSMUSG00000067787	ProperStrand	13	1	-17.1946
chr10	122702149	122702167	protein_coding	Fam19a2	utr5	ENSMUSG00000044071	NonProperStrand	52	chr6	113644906	113644932	protein_coding	Irak2	utr3	ENSMUSG00000060477	ProperStrand	6	1	-18.0147
chr7	149562443	149562491	protein_coding	Ctsd	utr3	ENSMUSG00000007891	ProperStrand	60	chr6	71832550	71832574	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-5.6110
chr9	78327842	78327932	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr6	72648854	72648934	protein_coding	Tcf7l1	intron	ENSMUSG00000055799	ProperStrand	61	1	-6.3016
chr5	74489230	74489586	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr11	62416578	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	10	-3.8806
chr8	109177527	109177753	protein_coding	Cdh1	exon	ENSMUSG00000000303	ProperStrand	283	chr7	52382755	52382776	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-3.7576
chr7	30231478	30231578	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	chr7	111381465	111381525	protein_coding	Trim6	utr3	ENSMUSG00000072244	ProperStrand	40	2	-15.2676
chr12	74018509	74018592	protein_coding	4930447C04Rik	utr5	ENSMUSG00000021098	ProperStrand	8	chr11	68887043	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	4	-20.8765
chr4	126241214	126242178	protein_coding	Clspn	exon	ENSMUSG00000042489	ProperStrand	89	chr1	162965538	162965596	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.5776
chr6	34762729	34762747	protein_coding	Agbl3	intron	ENSMUSG00000038836	ProperStrand	3	chr10	110918634	110918686	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-9.6547
chrX	84483698	84483736	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr1	162968468	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-1.5158
chr5	122916058	122916086	protein_coding	Atp2a2	exon	ENSMUSG00000029467	ProperStrand	166	chr4	111928995	111929011	protein_coding	Skint3	intron	ENSMUSG00000070868	NonProperStrand	48	1	-11.7210
chr12	85808362	85808461	protein_coding	Lin52	intron	ENSMUSG00000085793	ProperStrand	5	chr19	8963023	8963083	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-7.1260
chr3	88715214	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr17	39985358	39985423	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-0.7572
chr2	154687631	154687721	protein_coding	Raly	exon	ENSMUSG00000027593	ProperStrand	116	chr14	76247737	76247817	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-2.9598
chr13	63612936	63612952	protein_coding	Ptch1	exon	ENSMUSG00000021466	NonProperStrand	118	chr17	35089181	35089235	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-4.1845
chr2	90235314	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr14	76245604	76245622	protein_coding-noncoding	Tpt1	utr5	ENSMUSG00000060126	NonProperStrand	5	1	-9.5409
chr17	39979977	39980077	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr1	169270349	169270394	LTR	MTC	MaLR	chr1MTC169270115	ProperStrand	1	1	-inf
chr11	104368574	104369703	protein_coding	Cdc27	exon	ENSMUSG00000020687	ProperStrand	24	chr16	36928800	36929350	protein_coding	Golgb1	exon	ENSMUSG00000034243	ProperStrand	92	3	-inf
chrX	99383184	99383204	protein_coding	Rps4x	exon	ENSMUSG00000031320	ProperStrand	139	chr10	90581034	90581127	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	6	-16.9628
chr3	16700181	16700254	LTR	MMERGLN-int	ERV1	chr3MMERGLN-int16692958	ProperStrand	3	chr13	49756393	49756413	protein_coding	Nol8	exon	ENSMUSG00000021392	ProperStrand	39	3	-inf
chr13	51872243	51872305	protein_coding-noncoding	Sema4d	utr3	ENSMUSG00000021451	ProperStrand	13	chr1	154733584	154733606	protein_coding	Smg7	intron	ENSMUSG00000042772	ProperStrand	88	1	-15.6414
chrX	132673816	132673833	protein_coding	Bex4	intron	ENSMUSG00000047844	NonProperStrand	70	chr8	32260335	32260424	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	2	-7.2342
chr13	12493390	12506647	protein_coding	Heatr1	exon	ENSMUSG00000050244	ProperStrand	74	chr10	23505152	23505224	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-1.9181
chr6	30455736	30455826	protein_coding	Tmem209	exon	ENSMUSG00000029782	ProperStrand	36	chr19	44188468	44188548	snoRNA	ENSMUSG00000077391_SNORA12	.	ENSMUSG00000077391	ProperStrand	506	1	-10.0739
chr9	40611293	40611335	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr10	117227045	117227061	protein_coding	Nup107	exon	ENSMUSG00000052798	NonProperStrand	66	1	-7.9485
chrX	53188927	53189017	LTR	MYSERV-int	ERVK	chrXMYSERV-int53188914	ProperStrand	1	chrX	53172272	53172352	LTR	RLTR13B3	ERVK	chrXRLTR13B353172146	ProperStrand	1	1	-inf
chr4	61875896	61875913	LTR	ORR1A2	MaLR	chr4ORR1A261875634	NonProperStrand	1	chr16	11144195	11144295	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	1	-inf
chr5	90661316	90661368	protein_coding	Ankrd17	exon	ENSMUSG00000055204	ProperStrand	77	chr15	5068445	5068478	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	3	-12.9529
chr2	129646396	129646417	protein_coding	Stk35	intron	ENSMUSG00000037885	ProperStrand	28	chr16	23111692	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-5.5476
chr11	104544376	104544394	LTR	MTD	MaLR	chr11MTD104544284	NonProperStrand	1	chr2	158185537	158185588	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-inf
chr4	117619807	117619935	protein_coding	St3gal3	intron	ENSMUSG00000028538	ProperStrand	8	chr16	23110988	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.2180
chr13	58499156	58500552	protein_coding	Hnrnpk	exon	ENSMUSG00000021546	ProperStrand	117	chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	1	-8.0618
chr17	71351453	71351488	protein_coding	Myl12a	utr5	ENSMUSG00000024048	ProperStrand	29	chr4	129522240	129522288	protein_coding	Ptp4a2	intron	ENSMUSG00000028788	ProperStrand	27	1	-16.4173
chr11	68606725	68610868	protein_coding	Myh10	exon	ENSMUSG00000020900	ProperStrand	91	chr5	74489582	74489672	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-3.0174
chr18	36743344	36749032	protein_coding	Ankhd1	utr5	ENSMUSG00000024483	ProperStrand	56	chr7	118219574	118219641	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-4.3014
chr6	125410451	125410542	protein_coding	Cd9	utr3	ENSMUSG00000030342	ProperStrand	81	chr16	23111694	23111774	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.4475
chr9	20726588	20726771	protein_coding	Dnmt1	exon	ENSMUSG00000004099	ProperStrand	91	chr11	69483193	69483273	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-3.2503
chr18	31871089	31871351	protein_coding	Sap130	exon	ENSMUSG00000024260	ProperStrand	32	chr18	35714252	35714291	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.6297
chr7	119167199	119253792	protein_coding	Usp47	utr5	ENSMUSG00000059263	ProperStrand	40	chr7	116663634	116663769	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	5	-14.1474
chr11	48619119	48619146	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	chr8	67087918	67087980	protein_coding	Cpe	exon	ENSMUSG00000037852	ProperStrand	8	2	-19.2605
chr18	63109676	63109692	protein_coding	Apcdd1	exon	ENSMUSG00000071847	NonProperStrand	254	chr3	95980360	95980406	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-4.0588
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr2	30197229	30197282	protein_coding	Nup188	exon	ENSMUSG00000052533	ProperStrand	96	1	-5.9962
chr1	7090870	7090887	protein_coding	Pcmtd1	intron	ENSMUSG00000051285	NonProperStrand	5	chr15	34370620	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-8.5662
chr17	88379494	88379601	protein_coding	Msh6	intron	ENSMUSG00000005370	ProperStrand	150	chr11	62951997	62952014	protein_coding	Pmp22	intron	ENSMUSG00000018217	NonProperStrand	40	1	-12.2937
chr11	108619052	108619069	protein_coding	Ccdc46	exon	ENSMUSG00000020728	ProperStrand	14	chr1	162968442	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-9.0114
chr4	43505712	43505792	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr5	144691953	144692043	protein_coding	Pms2	utr3	ENSMUSG00000079109	ProperStrand	21	1	-5.0559
chrX	34356728	34356745	antisense	Gm14549	.	ENSMUSG00000084990	ProperStrand	1	chrX	84483706	84483731	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-inf
chr13	58495484	58495847	protein_coding	Hnrnpk	exon	ENSMUSG00000021546	ProperStrand	117	chr9	120038620	120038672	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.9068
chr14	34780585	34780702	protein_coding	Zfp488	utr3	ENSMUSG00000044519	ProperStrand	54	chr2	130103460	130103500	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-8.2743
chr2	102685850	102685870	protein_coding	Cd44	intron	ENSMUSG00000005087	ProperStrand	2	chr16	23110454	23110499	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-9.6327
chr4	4719981	4720052	protein_coding	Impad1	exon	ENSMUSG00000066324	ProperStrand	23	chr4	122970398	122970488	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-9.3456
chr1	133872996	133873086	protein_coding	Slc45a3	intron	ENSMUSG00000026435	ProperStrand	8	chr4	131865856	131865947	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-9.1913
chr1	133252344	133252444	protein_coding	Srgap2	intron	ENSMUSG00000026425	ProperStrand	299	chr1	162968213	162968289	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-3.7166
chr11	78151343	78152849	protein_coding	Pigs	exon	ENSMUSG00000041958	ProperStrand	31	chr5	98614334	98614352	pseudogene	A730035I17Rik	.	ENSMUSG00000045238	ProperStrand	17	1	-17.1934
chr1	13164729	13164806	protein_coding	Ncoa2	exon	ENSMUSG00000005886	ProperStrand	26	chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	1	-12.1682
chr15	100425844	100425861	protein_coding	Pou6f1	intron	ENSMUSG00000009739	NonProperStrand	4	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.0048
chr12	114290175	114290191	protein_coding	Pacs2	intron	ENSMUSG00000021143	NonProperStrand	302	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-2.8271
chr16	43886933	43886980	protein_coding	Qtrtd1	intron	ENSMUSG00000022704	ProperStrand	11	chr17	46460412	46460452	protein_coding	Abcc10	exon	ENSMUSG00000032842	ProperStrand	20	3	-21.8439
chr5	121655016	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	chr10	23505559	23505623	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	4	-0.8782
chr19	37346329	37346442	protein_coding	Ide	intron	ENSMUSG00000056999	ProperStrand	19	chr4	131908687	131908719	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.0948
chr1	192712615	192712631	protein_coding	Rps6kc1	exon	ENSMUSG00000089872	ProperStrand	241	chr18	33954816	33954874	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-1.2228
chr2	63936035	63936053	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr17	24856619	24856684	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-1.4898
chr8	91106344	91106360	protein_coding	Nkd1	intron	ENSMUSG00000031661	ProperStrand	57	chr14	33005095	33005139	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-4.0903
chr17	31460911	31460927	protein_coding	Slc37a1	intron	ENSMUSG00000024036	NonProperStrand	4	chr16	23110939	23110957	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.6489
chr7	86609715	86609783	protein_coding	Polg	exon	ENSMUSG00000039176	ProperStrand	93	chr17	26360447	26360537	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	1	-9.1498
chr13	120253418	120253434	protein_coding	4833420G17Rik	intron	ENSMUSG00000062822	ProperStrand	49	chr2	145077955	145209253	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-8.1286
chr9	109970014	109970069	protein_coding	Mtap4	exon	ENSMUSG00000032479	ProperStrand	188	chr8	124066021	124066038	protein_coding	Gm20388	intron	ENSMUSG00000092329	NonProperStrand	203	2	-13.6345
chrX	130496426	130496668	protein_coding	Sytl4	exon	ENSMUSG00000031255	ProperStrand	169	chr12	110887828	110887852	snoRNA	ENSMUSG00000084549_SNORD113	.	ENSMUSG00000084549	ProperStrand	196	1	-8.8642
chr2	158182187	158182280	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	12	-9.4135
chr1	95316690	95316724	protein_coding	Hdlbp	exon	ENSMUSG00000034088	ProperStrand	97	chr17	35089181	35089227	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-4.5565
chr1	135555314	135555414	protein_coding	Zc3h11a	intron	ENSMUSG00000026464	ProperStrand	102	chr11	97642971	97643039	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.6170
chr11	75304971	75305021	protein_coding	Prpf8	exon	ENSMUSG00000020850	ProperStrand	255	chr7	52975760	52975814	protein_coding	Rpl18	exon	ENSMUSG00000059070	ProperStrand	116	1	-9.0908
chr12	55452078	55452138	Low_complexity	CT-rich	Low_complexity	chr12CT-rich55452088	ProperStrand	1	chr9	15119666	15119766	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-inf
mmu-miR-6240	1	23	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr14	13338419	13338435	protein_coding	Cadps	exon	ENSMUSG00000054423	ProperStrand	32	1	-7.1521
chr6	91410511	91410601	LINE	Lx5	L1	chr6Lx591410012	ProperStrand	1	chr2	167487781	167487871	antisense	Gm14320	.	ENSMUSG00000085914	ProperStrand	1	1	-inf
chr6	134961660	134973348	protein_coding	Ddx47	exon	ENSMUSG00000030204	ProperStrand	11	chr1	162966813	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	3	-inf
chr4	43505738	43505781	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr6	134198680	134198697	protein_coding	Etv6	exon	ENSMUSG00000030199	ProperStrand	46	1	-3.5548
mmu-miR-6240	1	23	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr13	112540780	112541440	protein_coding	Map3k1	exon	ENSMUSG00000021754	ProperStrand	113	2	-7.7414
chr9	44657060	44657130	protein_coding	Mll1	exon	ENSMUSG00000002028	ProperStrand	151	chr15	79913288	79913351	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-1.9864
chr11	22896380	22901594	protein_coding	Cct4	exon	ENSMUSG00000007739	ProperStrand	81	chr9	15119648	15119969	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-5.7825
chr7	148633868	148633927	protein_coding	Rplp2	exon	ENSMUSG00000025508	ProperStrand	106	chr4	116839045	116839497	protein_coding	Kif2c	exon	ENSMUSG00000028678	ProperStrand	32	1	-13.4403
chr10	127551684	127551705	protein_coding	Baz2a	exon	ENSMUSG00000040054	ProperStrand	274	chr9	15119646	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-1.1198
chr4	43505656	43505721	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr13	99637104	99640275	protein_coding	Tnpo1	exon	ENSMUSG00000009470	ProperStrand	56	1	-3.1947
chr16	34715471	34715533	protein_coding	Ccdc14	intron	ENSMUSG00000022833	ProperStrand	22	chr5	27375819	27375836	protein_coding	Dpp6	utr5	ENSMUSG00000061576	ProperStrand	35	1	-16.4820
chr3	123067809	123067896	protein_coding	Sec24d	utr3	ENSMUSG00000039234	ProperStrand	22	chr18	35716851	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-9.8077
chr15	73586530	73587248	protein_coding	Ptp4a3	exon	ENSMUSG00000059895	ProperStrand	45	chr9	15119648	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-5.4132
chr9	119664282	119664299	protein_coding	Scn11a	exon	ENSMUSG00000034115	ProperStrand	55	chr15	98356847	98356913	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	1	-7.9277
chr7	31324372	31324441	protein_coding	BC053749	utr3	ENSMUSG00000036864	ProperStrand	4	chr9	78215570	78215592	protein_coding	Dppa5a	exon	ENSMUSG00000060461	ProperStrand	79	1	-18.7362
chr14	80262508	80262525	lincRNA	Gm6999	intron	ENSMUSG00000075495	ProperStrand	265	chr17	29469112	29469231	protein_coding	Mtch1	utr3	ENSMUSG00000024012	ProperStrand	13	1	-13.4528
chr6	119898685	119898775	protein_coding	Wnk1	exon	ENSMUSG00000045962	NonProperStrand	2	chr16	23110965	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	NonProperStrand	93	1	-20.0851
chr18	48662591	48662681	LINE	L1Md_A	L1	chr18L1Md_A48662103	NonProperStrand	1	chr14	34780674	34780764	protein_coding	Zfp488	utr3	ENSMUSG00000044519	ProperStrand	54	1	-inf
chr4	91012543	91012564	protein_coding	Elavl2	intron	ENSMUSG00000008489	ProperStrand	52	chr7	52381737	52381755	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-7.8601
chr10	127774982	127787511	protein_coding	Cs	exon	ENSMUSG00000005683	ProperStrand	63	chr9	79607395	79607413	protein_coding	Cox7a2	intron	ENSMUSG00000032330	ProperStrand	10	1	-16.8724
chr2	160523898	160523937	protein_coding	Top1	exon	ENSMUSG00000070544	ProperStrand	14	chr9	15119649	15119739	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.3767
chr7	150816348	150816438	LTR	RMER17C-int	ERVK	chr7RMER17C-int150816350	NonProperStrand	1	chr9	55921324	55921404	LTR	RMER17C	ERVK	chr9RMER17C55921302	NonProperStrand	1	1	-inf
chr4	116827020	116827319	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	chr19	8800388	8800468	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-1.1295
chr1	72757865	72758254	protein_coding	Rpl37a	utr5	ENSMUSG00000046330	ProperStrand	94	chr4	130039900	130040000	protein_coding	Snrnp40	exon	ENSMUSG00000074088	ProperStrand	12	1	-15.6843
chr10	61011419	61011450	protein_coding	Lrrc20	intron	ENSMUSG00000037151	ProperStrand	6	chr16	23110912	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-6.6757
chr5	100792904	100794754	protein_coding	Sec31a	exon	ENSMUSG00000035325	ProperStrand	61	chr18	35716804	35716834	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-3.8487
chr12	109439063	109439103	protein_coding	Ccnk	intron	ENSMUSG00000021258	ProperStrand	31	chr10	82456766	82456784	protein_coding	Chst11	intron	ENSMUSG00000034612	ProperStrand	170	1	-12.5584
chr11	120405221	120405311	protein_coding	Fam195b	exon	ENSMUSG00000061111	ProperStrand	9	chr16	23111738	23111818	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.4225
chr8	13416895	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr11	4820972	4820990	protein_coding	Thoc5	intron	ENSMUSG00000034274	ProperStrand	325	1	-3.2285
chr13	72763664	72763681	antisense	Gm20554	.	ENSMUSG00000093587	NonProperStrand	40	chr16	23110828	23110938	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.4886
chr9	120865012	120865050	protein_coding	Ctnnb1	exon	ENSMUSG00000006932	ProperStrand	214	chr7	148140809	148140860	protein_coding	Ifitm2	utr3	ENSMUSG00000060591	ProperStrand	25	2	-19.0146
mmu-miR-6238	1	22	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-4.2849
chrX	55285094	55285181	protein_coding	Zic3	exon	ENSMUSG00000067860	ProperStrand	21	chr10	107800729	107800819	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	3	-inf
chr19	47156413	47156432	protein_coding	Taf5	exon	ENSMUSG00000025049	ProperStrand	5	chr3	123210854	123210983	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-16.6642
chr7	52748543	52748587	protein_coding	Nucb1	utr3	ENSMUSG00000030824	ProperStrand	49	chr11	97642952	97643036	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.8235
chr12	113414061	113414161	protein_coding	Kif26a	exon	ENSMUSG00000021294	ProperStrand	8	chr9	120037980	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-8.7708
chr18	73693085	73693189	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr10	23505149	23505282	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	67	-3.3727
chr1	34873822	34873881	protein_coding	Fam168b	utr3	ENSMUSG00000037503	ProperStrand	23	chr4	131865379	131865459	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-5.8638
chr15	82686528	82686581	protein_coding	Tcf20	exon	ENSMUSG00000041852	ProperStrand	658	chr17	35089181	35089220	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-1.2786
chr12	111891518	111891623	protein_coding	Dync1h1	intron	ENSMUSG00000018707	ProperStrand	648	chrX	7147532	7147592	protein_coding	Ppp1r3f	intron	ENSMUSG00000039556	ProperStrand	23	1	-10.4898
chr11	97489568	97489668	protein_coding	E130012A19Rik	exon	ENSMUSG00000043439	ProperStrand	83	chr2	144087377	144087440	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	3	-13.6118
chrX	156566468	156567353	protein_coding	Pdha1	exon	ENSMUSG00000031299	ProperStrand	27	chr17	13112494	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	5	-19.7137
chr2	22445690	22445707	protein_coding	Myo3a	intron	ENSMUSG00000025716	ProperStrand	30	chr9	45198928	45199653	protein_coding	Fxyd6	exon	ENSMUSG00000066705	NonProperStrand	108	1	-13.5342
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr1	87979845	87981829	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	2	-2.9188
chr4	77957002	77957020	LINE	Lx6	L1	chr4Lx677956774	ProperStrand	16	chr2	22444549	22444577	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-10.4532
chr12	13230766	13230805	protein_coding	Ddx1	exon	ENSMUSG00000037149	ProperStrand	47	chr16	23110911	23110962	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.1909
chr7	112716186	112716237	protein_coding	Apbb1	exon	ENSMUSG00000037032	ProperStrand	9	chr6	47134539	47134568	protein_coding	Cntnap2	intron	ENSMUSG00000039419	NonProperStrand	283	2	-19.5256
chrX	132673816	132673833	protein_coding	Bex4	intron	ENSMUSG00000047844	NonProperStrand	70	chr15	79913288	79913347	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-3.3094
chr19	21351341	21351392	protein_coding-noncoding	Zfand5	utr5	ENSMUSG00000024750	ProperStrand	1	chr16	23110931	23110957	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr8	110110558	110110614	protein_coding	Psmd7	exon	ENSMUSG00000039067	ProperStrand	36	chr8	124431091	124431191	protein_coding	Slc7a5	exon	ENSMUSG00000040010	ProperStrand	166	1	-12.3035
chr14	33005038	33005091	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	chr9	15117038	15117119	snoRNA	ENSMUSG00000077614_SNORA40	.	ENSMUSG00000077614	ProperStrand	54	2	-7.0228
chr3	130961930	130961946	protein_coding	Hadh	intron	ENSMUSG00000027984	NonProperStrand	13	chr8	73419703	73419734	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-6.0818
chr15	20083401	20083418	LINE	Lx	L1	chr15Lx20083212	NonProperStrand	14	chr11	80965641	80965658	protein_coding	Accn1	exon	ENSMUSG00000020704	NonProperStrand	228	1	-13.6018
chr19	42420031	42420111	protein_coding	Crtac1	intron	ENSMUSG00000042401	NonProperStrand	17	chr8	3390042	3390132	protein_coding	A430078G23Rik	utr3	ENSMUSG00000074497	ProperStrand	8	1	-19.2248
chr4	115742553	115742577	protein_coding	Uqcrh	exon	ENSMUSG00000063882	ProperStrand	6	chr7	116663633	116663710	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-7.0045
chr4	140507502	140507518	protein_coding	Padi2	utr3	ENSMUSG00000028927	ProperStrand	24	chr2	26494777	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.8333
chr5	124842819	124842909	protein_coding	Sbno1	intron	ENSMUSG00000038095	ProperStrand	134	chr10	110918549	110918629	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-2.0526
chr2	153304666	153304768	protein_coding	8430427H17Rik	intron	ENSMUSG00000061411	ProperStrand	19	chr18	35716826	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.2504
chr17	46861595	46861611	protein_coding	Pex6	exon	ENSMUSG00000002763	ProperStrand	292	chr15	79910843	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	3	-3.2720
chr9	106333451	106333542	protein_coding	Rpl29	exon	ENSMUSG00000048758	ProperStrand	45	chr16	23111451	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-6.7814
chr2	113938357	113938373	protein_coding	Aqr	exon	ENSMUSG00000040383	ProperStrand	70	chr2	26494762	26494790	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.8325
chr1	195125728	195125745	LINE	L2a	L2	chr1L2a195125465	NonProperStrand	28	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-10.1299
chr2	121823143	121823202	protein_coding	Ctdspl2	intron	ENSMUSG00000033411	ProperStrand	11	chr19	8800361	8800451	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-6.8583
chr2	90235298	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	82495052	82495068	protein_coding	Hhip	utr3	ENSMUSG00000064325	NonProperStrand	3	1	-10.7414
chr13	55449325	55449405	protein_coding	Lman2	intron	ENSMUSG00000021484	ProperStrand	26	chr16	23110851	23110941	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.2392
chr7	107483666	107486908	protein_coding	Ppme1	exon	ENSMUSG00000030718	ProperStrand	38	chr2	87802622	87802639	protein_coding	Olfr1157	exon	ENSMUSG00000075143	NonProperStrand	49	1	-14.6608
chr5	138609085	138609175	protein_coding	Mcm7	exon	ENSMUSG00000029730	ProperStrand	258	chr11	68886941	68887021	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-1.6161
chr9	44193320	44193382	protein_coding	Hyou1	exon	ENSMUSG00000032115	ProperStrand	145	chr7	86611350	86611378	tRNA	tRNA387-ArgTCG	.	1309988	ProperStrand	77	1	-11.0407
chr17	46663594	46663610	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr7	19942413	19942433	protein_coding	Cd3eap	exon	ENSMUSG00000047649	ProperStrand	4	1	-14.9093
chr9	106141906	106141923	protein_coding	Alas1	exon	ENSMUSG00000032786	ProperStrand	3	chr19	8799850	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-11.2482
chr7	133691131	133701201	protein_coding	Eif3c	exon	ENSMUSG00000030738	ProperStrand	92	chr16	23111377	23111484	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	5	-5.1548
chr1	95313858	95313875	protein_coding	Hdlbp	exon	ENSMUSG00000034088	ProperStrand	97	chr2	166890556	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-6.6037
chr12	110888537	110888597	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr2	63936035	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	2	-5.7435
chr17	35277225	35277300	protein_coding	Bag6	exon	ENSMUSG00000024392	ProperStrand	181	chr2	26494710	26494759	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	4	-5.5932
chr10	88872277	88872294	protein_coding	Gas2l3	utr3	ENSMUSG00000074802	ProperStrand	16	chr11	6428099	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-9.4247
chr17	35357142	35357200	protein_coding	Nfkbil1	utr3	ENSMUSG00000042419	ProperStrand	4	chr9	15118332	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-8.9841
chr18	56900390	56900490	protein_coding	Lmnb1	exon	ENSMUSG00000024590	ProperStrand	176	chr8	87426786	87426805	protein_coding	Klf1	exon	ENSMUSG00000054191	NonProperStrand	70	3	-inf
chr11	87033747	87033788	protein_coding	Trim37	utr3	ENSMUSG00000018548	ProperStrand	17	chr4	131866170	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-6.1146
chr13	6598031	6599880	protein_coding	Pfkp	exon	ENSMUSG00000021196	ProperStrand	197	chr6	120338060	120338076	protein_coding	Kdm5a	exon	ENSMUSG00000030180	ProperStrand	57	1	-11.0317
chr1	157178968	157178984	protein_coding-noncoding	Xpr1	utr3	ENSMUSG00000026469	NonProperStrand	1	chr3	131230576	131242305	protein_coding	Papss1	intron	ENSMUSG00000028032	NonProperStrand	1	1	-inf
chrX	13197829	13197909	protein_coding	Cask	exon	ENSMUSG00000031012	ProperStrand	41	chr8	73419657	73419747	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.8312
chr2	26493414	26493514	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr17	80879445	80879477	protein_coding	Sos1	utr5	ENSMUSG00000024241	ProperStrand	10	1	-9.8302
chr1	187235185	187235201	protein_coding	Eprs	exon	ENSMUSG00000026615	ProperStrand	149	chr7	116664790	116664924	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.1455
mmu-miR-6240	3	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr5	144015690	144015806	protein_coding	Zfp316	exon	ENSMUSG00000046658	ProperStrand	7	2	-16.4382
chr11	106123580	106123755	protein_coding	Psmc5	exon	ENSMUSG00000020708	ProperStrand	51	chr8	125432703	125439887	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	1	-9.9428
chr19	53087909	53089116	protein_coding	Xpnpep1	exon	ENSMUSG00000025027	ProperStrand	49	chr18	9214980	9214996	protein_coding	Fzd8	utr3	ENSMUSG00000036904	ProperStrand	3	1	-inf
chr17	89040273	89040289	protein_coding	Ston1	intron	ENSMUSG00000033855	NonProperStrand	5	chr1	162966189	162966269	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	3	-inf
chr5	34001333	34001350	protein_coding	Tacc3	utr5	ENSMUSG00000037313	ProperStrand	26	chr6	125136376	125136467	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	1	-8.1147
chr12	88301265	88301293	protein_coding	2310044G17Rik	exon	ENSMUSG00000034157	ProperStrand	48	chr3	34550547	34550595	protein_coding	Sox2	utr3	ENSMUSG00000074637	ProperStrand	299	3	-19.0170
chr8	47619756	47619846	protein_coding	Acsl1	utr3	ENSMUSG00000018796	ProperStrand	23	chr4	131908359	131908439	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-5.2237
chr1	154519426	154519443	protein_coding	Rgl1	intron	ENSMUSG00000026482	NonProperStrand	12	chr18	35714144	35714215	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-6.5851
chr12	84909940	84915608	protein_coding	Zfyve1	exon	ENSMUSG00000042628	ProperStrand	28	chr17	24857817	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	3	-9.1183
chr2	25870445	25870466	protein_coding	Ubac1	exon	ENSMUSG00000036352	ProperStrand	25	chr4	131908689	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.6029
chr18	85030776	85030794	protein_coding	Cyb5	intron	ENSMUSG00000024646	NonProperStrand	3	chr9	120038527	120038665	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-9.2011
chr2	9985901	9985917	protein_coding	Atp5c1	exon	ENSMUSG00000025781	ProperStrand	138	chr10	110918635	110918694	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-2.0052
chr12	29376687	29377411	protein_coding	Ttc15	exon	ENSMUSG00000020628	ProperStrand	15	chr4	131865454	131865515	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	5	-inf
chr11	97641451	97641544	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	chr1	9932606	9932626	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-2.5359
chr14	50302084	50302346	protein_coding	3632451O06Rik	exon	ENSMUSG00000036242	ProperStrand	5	chr18	35716766	35716858	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-11.6367
chr15	27434123	27434223	protein_coding	Ank	intron	ENSMUSG00000022265	ProperStrand	37	chrX	34622906	34622963	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-4.0674
chr11	35603095	35603119	protein_coding	Pank3	utr3	ENSMUSG00000018846	ProperStrand	5	chr17	23869596	23869659	protein_coding	Pkmyt1	exon	ENSMUSG00000023908	ProperStrand	9	2	-18.9703
chr15	102844825	102844841	protein_coding	Hoxc5	exon	ENSMUSG00000022485	ProperStrand	40	chr16	23110828	23110873	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.7072
chr17	47743836	47743894	protein_coding	Bysl	exon	ENSMUSG00000023988	ProperStrand	48	chr1	88247745	88247828	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	5	-20.3919
chr4	136101749	136101821	protein_coding	Luzp1	utr3	ENSMUSG00000001089	ProperStrand	35	chr4	115670137	115670153	protein_coding	Faah	utr3	ENSMUSG00000034171	ProperStrand	26	2	-21.8635
chrX	134289060	134289077	protein_coding	Il1rapl2	intron	ENSMUSG00000059203	ProperStrand	11	chr10	23505155	23505278	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.1476
chr14	55515995	55516019	protein_coding	Pabpn1	exon	ENSMUSG00000022194	ProperStrand	22	chr1	9932550	9932624	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-9.7530
chr18	75161146	75161172	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	chr3	68889148	68889218	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	3	-1.3038
chr19	41992746	41992777	protein_coding	Pgam1	utr3	ENSMUSG00000011752	ProperStrand	124	chr2	26494708	26494802	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.8752
chr7	6228099	6228165	protein_coding	Gm6792	intron	ENSMUSG00000053367	ProperStrand	5	chr2	26493366	26493449	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	3	-20.8919
chr2	81065558	81065648	LINE	L1Md_F2	L1	chr2L1Md_F281065178	ProperStrand	1	chr5	44027302	44027392	LINE	L1Md_F2	L1	chr5L1Md_F244027086	ProperStrand	1	1	-inf
chr8	98393516	98394693	protein_coding	Got2	exon	ENSMUSG00000031672	ProperStrand	85	chr11	59618203	59618293	protein_coding	Flcn	utr5	ENSMUSG00000032633	ProperStrand	52	1	-12.9005
chr8	112363232	112363275	snoRNA	ENSMUSG00000077549_Snord71	.	ENSMUSG00000077549	ProperStrand	196	chr5	130300439	130300539	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-0.7827
chr19	38869531	38869547	protein_coding	Noc3l	exon	ENSMUSG00000024999	NonProperStrand	149	chr5	121655441	121655507	protein_coding	Rpl6	exon	ENSMUSG00000029614	ProperStrand	332	1	-8.0662
chr5	120636325	120647891	protein_coding	Rbm19	exon	ENSMUSG00000029594	ProperStrand	40	chr17	24665446	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-5.7325
chr4	118804795	118804842	protein_coding	Slc2a1	exon	ENSMUSG00000028645	ProperStrand	361	chr1	9932550	9932595	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	2	-7.0524
chr14	57312831	57312859	protein_coding	Mphosph8	intron	ENSMUSG00000079184	NonProperStrand	27	chr17	35089181	35089227	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	2	-11.4019
chr18	61236827	61236844	protein_coding	Pdgfrb	intron	ENSMUSG00000024620	NonProperStrand	37	chr8	109583602	109583649	protein_coding	Nip7	utr3	ENSMUSG00000031917	ProperStrand	18	1	-16.7190
chr1	75280765	75280845	SINE	B1_Mur1	Alu	chr1B1_Mur175280779	ProperStrand	1	chr1	75280658	75280748	SINE	B1_Mur4	Alu	chr1B1_Mur475280639	ProperStrand	1	1	-inf
chr17	54628199	54628289	LINE	L1MD	L1	chr17L1MD54628223	NonProperStrand	1	chr17	54628057	54628147	SINE	B1_Mm	Alu	chr17B1_Mm54628057	ProperStrand	1	1	-inf
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	181405343	181405359	protein_coding	Sox18	exon	ENSMUSG00000046470	ProperStrand	96	2	-6.0740
chr3	87718028	87718868	protein_coding	Hdgf	exon	ENSMUSG00000004897	ProperStrand	117	chr11	69483137	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	4	-5.8651
chr6	70794802	70794819	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chr1	34636396	34636415	protein_coding	1700101I19Rik	exon	ENSMUSG00000045815	ProperStrand	3	1	-17.7800
chr9	21441804	21507809	protein_coding	Smarca4	utr3	ENSMUSG00000032187	ProperStrand	196	chr7	150717345	150717425	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	11	-21.6727
chr5	130764799	130772504	protein_coding	Tyw1	exon	ENSMUSG00000056310	ProperStrand	32	chr16	23110532	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.5869
chr1	136386395	136386495	protein_coding	Klhl12	utr3	ENSMUSG00000026455	ProperStrand	6	chr11	98878344	98878398	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-11.0174
chr8	20013038	20013125	pseudogene	2610005L07Rik	.	ENSMUSG00000071793	ProperStrand	40	chr9	15119646	15119736	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	5	-14.5405
chr6	83721785	83721820	protein_coding-noncoding	Tex261	utr3	ENSMUSG00000014748	ProperStrand	2	chr3	123210854	123210942	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-inf
chr9	15119635	15119658	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	chr1	87983864	87983971	snoRNA	ENSMUSG00000077274_SNORA26	.	ENSMUSG00000077274	ProperStrand	361	2	-0.7040
chr9	103247238	103248105	protein_coding	Topbp1	exon	ENSMUSG00000032555	ProperStrand	81	chr9	58082162	58082252	protein_coding	Pml	exon	ENSMUSG00000036986	ProperStrand	45	1	-13.2912
chr8	3637251	3639520	protein_coding	Stxbp2	exon	ENSMUSG00000004626	ProperStrand	19	chr5	121655127	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.9783
chrX	34667269	34667285	protein_coding	Nkap	exon	ENSMUSG00000016409	NonProperStrand	133	chr1	162965980	162965999	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-2.2023
chr8	113150747	113150827	protein_coding	Vac14	intron	ENSMUSG00000010936	NonProperStrand	23	chr2	121385329	121385419	protein_coding	Frmd5	intron	ENSMUSG00000027238	NonProperStrand	1	1	-inf
chr7	117189863	117189932	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr4	131866652	131866673	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	2	-4.0710
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr10	117227045	117227061	protein_coding	Nup107	exon	ENSMUSG00000052798	NonProperStrand	66	1	-7.6049
chr9	55343565	55343598	protein_coding	Etfa	exon	ENSMUSG00000032314	ProperStrand	20	chr14	33005138	33005236	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	8	-19.7744
chr11	94527814	94528415	protein_coding	Xylt2	exon	ENSMUSG00000020868	ProperStrand	65	chr5	121656762	121657156	protein_coding	Rpl6	exon	ENSMUSG00000029614	ProperStrand	332	1	-9.7246
chr2	91318472	91318490	protein_coding-noncoding	Lrp4	utr5	ENSMUSG00000027253	NonProperStrand	1	chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	1	-inf
chr11	101645784	101645807	protein_coding-noncoding	Etv4	utr3	ENSMUSG00000017724	NonProperStrand	9	chr6	85895881	85895897	protein_coding	Dusp11	utr3	ENSMUSG00000030002	ProperStrand	37	1	-17.9125
chr7	25673362	25673415	protein_coding	Rps19	exon	ENSMUSG00000040952	ProperStrand	101	chr18	35716762	35716852	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-4.0828
chr3	87689184	87689203	protein_coding	Prcc	exon	ENSMUSG00000004895	ProperStrand	38	chr10	61732510	61732600	protein_coding	Hk1	utr3	ENSMUSG00000037012	ProperStrand	84	2	-inf
chr16	95944237	95944258	DNA	Charlie1	MER1_type	chr16Charlie195943527	NonProperStrand	1	chr5	130300449	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-inf
chr12	114160818	114160908	protein_coding	Jag2	intron	ENSMUSG00000002799	ProperStrand	28	chr19	8963092	8963172	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.6314
chr5	121655811	121655850	protein_coding	Rpl6	exon	ENSMUSG00000029614	ProperStrand	332	chr8	77742558	77742574	protein_coding	Rasd2	exon	ENSMUSG00000034472	NonProperStrand	237	1	-7.1454
chr4	128867196	128867212	protein_coding	Yars	exon	ENSMUSG00000028811	ProperStrand	131	chr17	24857788	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.1187
chr11	97808761	97808851	protein_coding	Plxdc1	intron	ENSMUSG00000017417	ProperStrand	20	chr11	69483201	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.4692
chr11	115664729	115664779	protein_coding	Caskin2	exon	ENSMUSG00000034471	ProperStrand	17	chr16	23110480	23110584	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.8009
chr13	58228698	58228760	protein_coding	Hnrnpa0	utr3	ENSMUSG00000007836	ProperStrand	110	chr11	78313939	78313956	protein_coding	Vtn	exon	ENSMUSG00000017344	ProperStrand	188	1	-9.8055
chr9	109972182	109984280	protein_coding	Mtap4	utr3	ENSMUSG00000032479	ProperStrand	188	chr16	23111372	23111505	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	5	-2.1603
chr2	131112637	131112680	protein_coding	Pank2	intron	ENSMUSG00000037514	ProperStrand	14	chr16	23110899	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.2008
chr19	10645264	10645281	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	chr8	60437146	60437162	protein_coding	Galntl6	exon	ENSMUSG00000061864	ProperStrand	44	1	-10.3819
chr4	149622214	149622643	protein_coding	Eno1	exon	ENSMUSG00000063524	ProperStrand	432	chr19	8800361	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	6	-5.6591
chr2	129998646	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr12	88778626	88778726	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-1.7300
chr9	40762540	40762556	protein_coding	4931429I11Rik	intron	ENSMUSG00000032023	NonProperStrand	49	chr11	6428098	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.5628
chr1	88426723	88426753	protein_coding	Ptma	utr3	ENSMUSG00000026238	ProperStrand	385	chr12	110918157	110918221	snoRNA	ENSMUSG00000065749_AF357428	.	ENSMUSG00000065749	ProperStrand	218	2	-11.2792
mmu-miR-5100	5	20	miRNA	mmu-miR-5100	.	mmu-miR-5100	ProperStrand	132	chr10	23505153	23505246	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-1.5515
chrX	156315499	156315519	protein_coding	Sh3kbp1	intron	ENSMUSG00000040990	ProperStrand	67	chr18	12172461	12172477	protein_coding	6030446N20Rik	intron	ENSMUSG00000049411	ProperStrand	235	1	-10.3538
chr13	23838706	23838745	protein_coding	Hist1h2bb	exon	ENSMUSG00000075031	ProperStrand	27	chr2	26494707	26494807	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-7.6776
chr19	23140045	23140062	lincRNA	C330002G04Rik	intron	ENSMUSG00000087169	ProperStrand	34	chr7	117190018	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.3973
chr17	5347022	5347040	protein_coding	Arid1b	utr3	ENSMUSG00000069729	NonProperStrand	22	chr9	15119350	15119426	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	3	-16.1407
chr11	121382366	121382456	protein_coding	Tbcd	intron	ENSMUSG00000039230	NonProperStrand	2	chr10	107341157	107341237	protein_coding	Otogl	intron	ENSMUSG00000091455	ProperStrand	3	1	-inf
chr5	111552024	111552041	lincRNA	Ttc28	intron	ENSMUSG00000033209	NonProperStrand	36	chrX	155810247	155810310	protein_coding	Eif1ax	utr5	ENSMUSG00000067194	ProperStrand	18	1	-16.7641
chr6	38577350	38577366	protein_coding	Klrg2	utr3	ENSMUSG00000071537	NonProperStrand	37	chr11	106362638	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-8.3728
chr16	35022646	35022671	protein_coding	Ptplb	exon	ENSMUSG00000035376	ProperStrand	17	chr4	141414617	141414665	protein_coding	Efhd2	utr3	ENSMUSG00000040659	ProperStrand	1	1	-inf
chr16	8698654	8698677	protein_coding	Usp7	exon	ENSMUSG00000022710	ProperStrand	118	chr11	69483184	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	4	-5.8284
chr7	29137641	29137668	protein_coding	Rps16	utr3	ENSMUSG00000037563	ProperStrand	191	chr7	26507905	26507991	protein_coding	Hnrnpul1	exon	ENSMUSG00000040725	ProperStrand	84	1	-10.3144
chr9	44168048	44169595	protein_coding	Vps11	exon	ENSMUSG00000032127	ProperStrand	19	chr1	89673666	89673746	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-5.4623
chr7	31895791	31899711	protein_coding	Hpn	utr5	ENSMUSG00000001249	ProperStrand	126	chr7	25357313	25358083	protein_coding	Xrcc1	exon	ENSMUSG00000051768	ProperStrand	8	1	-15.9272
chr13	24923612	24923672	protein_coding	Tdp2	exon	ENSMUSG00000035958	ProperStrand	11	chr5	111121066	111121152	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-9.8742
chr16	57391758	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr2	130103751	130103796	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-3.1336
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr16	14146135	14146856	protein_coding	4921513D23Rik	exon	ENSMUSG00000060657	ProperStrand	47	1	-9.0960
chr15	54697505	54697522	protein_coding	Enpp2	exon	ENSMUSG00000022425	ProperStrand	31	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.8473
chr9	96082810	96082826	protein_coding	Gk5	utr3	ENSMUSG00000041440	ProperStrand	7	chr17	13112450	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-8.9252
chr5	108998806	108998858	protein_coding	Gak	utr3	ENSMUSG00000062234	ProperStrand	33	chr16	23110877	23110940	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-4.5464
chr6	89281922	89282113	protein_coding	Plxna1	exon	ENSMUSG00000030084	ProperStrand	233	chr12	17553000	17553080	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-2.5815
chr16	17210537	17210554	protein_coding	Rimbp3	exon	ENSMUSG00000071636	ProperStrand	67	chr5	121655016	121655096	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.5431
chr5	65952377	65952395	protein_coding	Ube2k	intron	ENSMUSG00000029203	ProperStrand	289	chr2	37255618	37255660	snoRNA	ENSMUSG00000077756_Snord90	.	ENSMUSG00000077756	ProperStrand	167	1	-8.1149
chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	chr4	116827117	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-1.8582
chr2	75704833	75704850	protein_coding	Agps	exon	ENSMUSG00000042410	NonProperStrand	9	chr9	120038467	120038551	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-6.7394
chrX	151954366	151954385	LINE	Lx5	L1	chrXLx5151954222	NonProperStrand	1	chr15	79908929	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-inf
chr6	7397995	7398085	LTR	ORR1A0-int	MaLR	chr6ORR1A0-int7396862	ProperStrand	1	chr8	129468747	129468827	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-inf
chr9	40612830	40612868	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	chr7	118219574	118219622	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-1.0482
chr9	40865562	40865578	protein_coding	Ubash3b	intron	ENSMUSG00000032020	ProperStrand	42	chr7	118219580	118219637	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-4.8539
chr5	31782730	31782748	protein_coding	Zfp512	utr3	ENSMUSG00000062761	ProperStrand	44	chr9	15119699	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	4	-10.9134
chr18	64864149	64864239	SINE	B1_Mus2	Alu	chr18B1_Mus264864089	ProperStrand	1	chr14	79817271	79817361	protein_coding	Mtrf1	intron	ENSMUSG00000022022	ProperStrand	4	1	-inf
chr8	77643184	77643237	protein_coding	Mcm5	exon	ENSMUSG00000005410	ProperStrand	199	chr18	35102297	35102342	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-4.2625
chr1	88247800	88247875	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	chr4	41150098	41150125	snoRNA	ENSMUSG00000089265_SNORD121A	.	ENSMUSG00000089265	ProperStrand	370	4	-7.0840
chrX	70237450	70237471	miRNA	Mir2137	.	ENSMUSG00000089357	ProperStrand	50	chr3	69345956	69345973	protein_coding	Ppm1l	intron	ENSMUSG00000027784	ProperStrand	32	1	-14.9491
chr13	6359652	6359742	LINE	L1Md_F2	L1	chr13L1Md_F26357526	ProperStrand	1	chr7	150407996	150408076	protein_coding	Kcnq1	intron	ENSMUSG00000009545	NonProperStrand	133	1	-inf
chr9	58082162	58082252	protein_coding	Pml	exon	ENSMUSG00000036986	ProperStrand	45	chr4	131908814	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.6382
chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	chr7	52381061	52381117	protein_coding	Rpl13a	utr3	ENSMUSG00000074129	ProperStrand	269	1	-4.0703
chr19	53406810	53406826	protein_coding	Mxi1	intron	ENSMUSG00000025025	ProperStrand	51	chr3	101259425	101261579	protein_coding	Igsf3	exon	ENSMUSG00000042035	ProperStrand	73	1	-13.2473
chrX	84483699	84483716	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr12	88912985	88913005	protein_coding	Gm2022	intron	ENSMUSG00000071217	NonProperStrand	57	1	-8.3517
chr17	81326221	81326311	LTR	RLTR10C	ERVK	chr17RLTR10C81326170	NonProperStrand	1	chr3	75064863	75064943	protein_coding	Serpini2	intron	ENSMUSG00000034139	NonProperStrand	1	1	-inf
chr5	116069334	116069692	protein_coding	Gcn1l1	exon	ENSMUSG00000041638	ProperStrand	408	chr17	35088957	35089016	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-2.3126
chr7	114533876	114533922	protein_coding	Syt9	intron	ENSMUSG00000062542	ProperStrand	14	chr2	158185537	158185654	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-9.4249
chr8	64017612	64028375	protein_coding	Palld	exon	ENSMUSG00000058056	NonProperStrand	125	chr8	13876177	13876226	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-5.6962
chr2	34631625	34631651	protein_coding	Hspa5	utr3	ENSMUSG00000026864	ProperStrand	181	chr13	34436854	34436870	protein_coding	Slc22a23	utr5	ENSMUSG00000038267	ProperStrand	95	2	-16.0332
chr19	34744347	34744363	protein_coding	Slc16a12	utr3	ENSMUSG00000009378	NonProperStrand	5	chr4	131908357	131908415	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-15.0190
chr4	40147330	40147347	LINE	L1MB1	L1	chr4L1MB140146060	ProperStrand	7	chr2	26494780	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-7.3461
chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-2.2883
chrX	139155042	139155059	protein_coding	Tmem164	intron	ENSMUSG00000047045	NonProperStrand	29	chr11	62416602	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-6.6005
chr15	96827476	96827500	protein_coding	Slc38a4	exon	ENSMUSG00000022464	ProperStrand	139	chr16	23110526	23110580	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-2.2632
chr11	116535915	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr16	94630975	94631075	protein_coding	Ttc3	intron	ENSMUSG00000040785	ProperStrand	47	1	-6.3929
chr1	134295654	134295744	Simple_repeat	(CAGAG)n	Simple_repeat	chr1(CAGAG)n134295617	NonProperStrand	1	chr11	3330571	3330661	protein_coding	Rnf185	intron	ENSMUSG00000020448	NonProperStrand	3	1	-inf
chr3	101388703	101388784	protein_coding	Atp1a1	exon	ENSMUSG00000033161	ProperStrand	316	chr8	93557881	93557971	protein_coding	Chd9	exon	ENSMUSG00000056608	ProperStrand	35	1	-11.0718
chr11	113590116	113590216	protein_coding	Cdc42ep4	exon	ENSMUSG00000041598	ProperStrand	56	chr4	131908689	131908751	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-2.5232
chr10	127689441	127689460	protein_coding	Timeless	utr3	ENSMUSG00000039994	ProperStrand	53	chr19	8799030	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-6.0768
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr6	125113012	125113253	protein_coding	Gapdh	exon	ENSMUSG00000057666	ProperStrand	356	1	-2.9883
chr19	7002905	7002921	protein_coding	Kcnk4	intron	ENSMUSG00000024957	NonProperStrand	11	chr2	26317867	26317940	protein_coding	Notch1	exon	ENSMUSG00000026923	ProperStrand	145	1	-15.0064
chr17	35257467	35258161	protein_coding	Csnk2b	utr5	ENSMUSG00000024387	ProperStrand	13	chr19	8798760	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-7.8530
chr11	87218535	87218553	Simple_repeat	(CACG)n	Simple_repeat	chr11(CACG)n87218520	NonProperStrand	3	chr7	116663633	116663729	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-8.5982
chr9	86593158	86593771	snRNA	ENSMUSG00000093074_CAAA01037531.1.36077.1	.	ENSMUSG00000093074	ProperStrand	13	chr3	68889109	68889146	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-6.2197
chr4	86114597	86114614	protein_coding	Fam154a	intron	ENSMUSG00000028492	ProperStrand	3	chr5	68012997	68013013	protein_coding	Shisa3	intron	ENSMUSG00000050010	ProperStrand	2	1	-inf
chr17	29107874	29107986	protein_coding	Stk38	utr3	ENSMUSG00000024006	ProperStrand	57	chr7	29136633	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.4519
chr11	57923165	57923208	protein_coding	Cnot8	exon	ENSMUSG00000020515	ProperStrand	12	chr2	29926940	29927028	protein_coding	Set	utr3	ENSMUSG00000054766	ProperStrand	167	1	-14.5467
chr3	53284670	53284692	protein_coding	2810046L04Rik	utr3	ENSMUSG00000049504	ProperStrand	15	chr11	6428089	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.8593
chr12	88293863	88293919	protein_coding	2310044G17Rik	intron	ENSMUSG00000034157	ProperStrand	48	chr13	46862888	46862988	snoRNA	ENSMUSG00000064558_SNORA55	.	ENSMUSG00000064558	ProperStrand	187	2	-17.9477
chrX	34190920	34191010	LTR	RLTR10-int	ERVK	chrXRLTR10-int34190023	ProperStrand	1	chr7	4030629	4030719	processed_transcript	9430041J12Rik	.	ENSMUSG00000086155	NonProperStrand	2	1	-inf
chr1	133141328	133141345	protein_coding	Rassf5	exon	ENSMUSG00000026430	ProperStrand	73	chr7	150717298	150717416	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	2	-8.4322
chr19	32560641	32560731	protein_coding	Minpp1	exon	ENSMUSG00000024896	ProperStrand	23	chr2	158185583	158185663	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-8.4080
chrX	148357344	148357398	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	chr11	116938557	116938647	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	10	-inf
chr9	32284324	32284414	protein_coding	Fli1	intron	ENSMUSG00000016087	ProperStrand	2	chr7	54443415	54443505	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	1	-19.4819
chr11	62416574	62416602	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr4	131865851	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	10	-2.7152
chr15	79249307	79249339	protein_coding	Csnk1e	utr3	ENSMUSG00000022433	ProperStrand	59	chr17	24857717	24857807	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.3250
chr19	9047394	9047495	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	chr11	55296297	55296330	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	3	-6.7179
chr7	31663114	31664217	protein_coding	Cd22	utr5	ENSMUSG00000030577	NonProperStrand	128	chr17	23953003	23953134	protein_coding	Srrm2	exon	ENSMUSG00000039218	ProperStrand	521	20	-inf
chr6	85285280	85285334	protein_coding	Rab11fip5	utr3	ENSMUSG00000051343	ProperStrand	16	chr4	131908264	131908354	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.6705
chr9	73294681	73294699	Other	RMER1A	Other	chr9RMER1A73294428	ProperStrand	1	chr9	20695571	20695612	protein_coding	Ppan	exon	ENSMUSG00000004100	ProperStrand	65	1	-inf
chr1	141351883	141351973	protein_coding-noncoding	Aspm	utr5	ENSMUSG00000033952	ProperStrand	1	chr1	141351659	141351749	protein_coding	Aspm	exon	ENSMUSG00000033952	ProperStrand	64	1	-inf
chr15	88641087	88641134	protein_coding	Alg12	intron	ENSMUSG00000035845	ProperStrand	5	chr4	63389602	63389618	protein_coding	Tnfsf15	utr3	ENSMUSG00000050395	NonProperStrand	121	1	-16.9733
chr9	106595205	106595295	protein_coding	Rad54l2	exon	ENSMUSG00000040661	ProperStrand	51	chr4	131866155	131866235	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-3.9689
chr9	44314153	44314176	protein_coding	Bcl9l	exon	ENSMUSG00000063382	NonProperStrand	2	chr18	73693167	73693187	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-12.9450
chr16	32299851	32299877	protein_coding	Rnf168	utr3	ENSMUSG00000014074	ProperStrand	7	chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-10.2305
chr18	12172461	12172477	protein_coding	6030446N20Rik	intron	ENSMUSG00000049411	ProperStrand	235	chr11	48670540	48670559	tRNA	tRNA2021-LeuAAG	.	1909964	ProperStrand	13	1	-13.6967
chr1	138851966	138851991	protein_coding	Nr5a2	intron	ENSMUSG00000026398	NonProperStrand	7	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-6.3961
chr6	87138823	87154416	protein_coding	Antxr1	exon	ENSMUSG00000033420	ProperStrand	70	chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	1	-10.3088
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr10	120218668	120218685	protein_coding	Msrb3	utr3	ENSMUSG00000051236	NonProperStrand	3	1	-14.3413
chr12	30580163	30580179	protein_coding	Myt1l	exon	ENSMUSG00000061911	NonProperStrand	19	chr2	26494789	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.2936
chr16	56035872	56035962	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	chr14	76247753	76247833	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-0.6990
chr12	52903238	52903328	protein_coding	Hectd1	exon	ENSMUSG00000035247	ProperStrand	41	chr3	108357295	108357385	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-5.2771
chrX	36131433	36131450	protein_coding	6030498E09Rik	intron	ENSMUSG00000051361	ProperStrand	7	chr7	118219575	118219611	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-8.4947
chr14	103482264	103482364	protein_coding	Fbxl3	exon	ENSMUSG00000022124	ProperStrand	21	chr16	23111778	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	9	-21.0350
chr11	5693704	5694252	protein_coding	Dbnl	exon	ENSMUSG00000020476	ProperStrand	16	chr11	116535949	116535982	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	4	-19.8283
chr4	131456056	131456269	protein_coding	Srsf4	exon	ENSMUSG00000028911	ProperStrand	101	chr11	77995191	77995241	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-5.1642
chr13	9833579	9833615	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr7	125865188	125865253	protein_coding	6330503K22Rik	exon	ENSMUSG00000033904	ProperStrand	25	2	-10.8236
chr5	72930878	72930894	protein_coding	Nfxl1	exon	ENSMUSG00000072889	NonProperStrand	21	chr1	162967491	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-5.4889
chr11	60529976	60530036	protein_coding	Flii	exon	ENSMUSG00000002812	ProperStrand	42	chr5	111812088	111812104	protein_coding	Pitpnb	exon	ENSMUSG00000050017	ProperStrand	137	1	-12.3762
chr12	114290175	114290191	protein_coding	Pacs2	intron	ENSMUSG00000021143	NonProperStrand	302	chr11	106362352	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-2.8044
chr8	87163341	87163419	protein_coding	Cacna1a	exon	ENSMUSG00000034656	ProperStrand	35	chr10	94781859	94781877	protein_coding	Cradd	intron	ENSMUSG00000045867	ProperStrand	25	1	-16.1629
chr2	51967156	51967256	protein_coding	Rif1	exon	ENSMUSG00000036202	ProperStrand	201	chr11	97631139	97631177	tRNA	tRNA1444-CysGCA	.	332788	ProperStrand	91	7	-20.7484
chr13	55129968	55130018	protein_coding	Uimc1	utr3	ENSMUSG00000025878	ProperStrand	25	chr9	43921151	43921210	protein_coding	Rnf26	utr5	ENSMUSG00000053128	ProperStrand	30	2	-inf
chr4	134120490	134120508	protein_coding	Man1c1	exon	ENSMUSG00000037306	NonProperStrand	20	chr16	23111451	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.0472
chr9	78326471	78328461	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr2	26494708	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	21	-5.9887
chr12	110888830	110888914	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr11	48613955	48613998	protein_coding	Gnb2l1	utr5	ENSMUSG00000020372	ProperStrand	347	1	-5.2022
chr15	77597977	77597993	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr12	17553062	17553090	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	2	-2.3004
chr19	8787310	8787848	protein_coding	Slc3a2	exon	ENSMUSG00000010095	ProperStrand	63	chr18	73693166	73693188	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-5.4287
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr8	127317792	127317808	protein_coding	Trim67	utr5	ENSMUSG00000036913	ProperStrand	43	1	-9.2624
chr5	120582456	120582477	protein_coding	Rbm19	intron	ENSMUSG00000029594	ProperStrand	40	chr14	31953025	31953118	protein_coding	Stab1	exon	ENSMUSG00000042286	NonProperStrand	127	1	-12.6274
chr6	83111671	83111687	protein_coding	1700003E16Rik	exon	ENSMUSG00000030030	ProperStrand	352	chr1	93263065	93263081	protein_coding	Fam132b	exon	ENSMUSG00000047443	NonProperStrand	98	1	-8.7854
chr7	13614567	13614777	protein_coding	Trim28	exon	ENSMUSG00000005566	ProperStrand	296	chr1	173041610	173041649	tRNA	tRNA710-ValCAC	.	124900	ProperStrand	206	4	-inf
chr9	21207759	21207794	protein_coding	Ilf3	exon	ENSMUSG00000032178	ProperStrand	164	chr1	162965981	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-1.8651
chr7	54442767	54442867	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	chr17	35089182	35089213	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-3.8508
chr9	15119303	15119372	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	chr16	18240815	18240905	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	1	-1.4304
chr2	155466835	155466855	protein_coding-noncoding	Trpc4ap	utr3	ENSMUSG00000038324	ProperStrand	4	chr13	14087431	14087447	protein_coding	B3galnt2	exon	ENSMUSG00000039242	NonProperStrand	4	1	-inf
chr2	172830661	172830698	protein_coding	Rae1	exon	ENSMUSG00000027509	ProperStrand	38	chr15	98350180	98350270	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-5.6505
chr10	109640049	109640066	SINE	RSINE1	B4	chr10RSINE1109639979	ProperStrand	51	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-6.1626
chr18	36842871	36842904	protein_coding	Slc35a4	utr3	ENSMUSG00000033272	ProperStrand	10	chr4	122968583	122968672	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	3	-19.4284
chr1	173433177	173433251	protein_coding	B930036N10Rik	utr3	ENSMUSG00000091993	ProperStrand	150	chr11	106362341	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	5	-16.6836
chr11	115884494	115884513	protein_coding	H3f3b	utr3	ENSMUSG00000016559	ProperStrand	76	chrX	160396313	160396329	protein_coding	Zrsr2	utr5	ENSMUSG00000031370	ProperStrand	57	1	-12.9407
chr10	58684406	58684423	protein_coding	Sept10	utr5	ENSMUSG00000019917	NonProperStrand	9	chr11	98878341	98878370	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-10.1442
chr10	88168762	88168779	LTR	RMER13A	ERVK	chr10RMER13A88168569	ProperStrand	4	chr16	23110829	23110890	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-12.7696
chr2	120872244	120872260	protein_coding	Tgm5	exon	ENSMUSG00000053675	NonProperStrand	163	chr6	4704996	4705069	protein_coding	Peg10	exon	ENSMUSG00000092035	ProperStrand	102	1	-10.2420
chr12	41464082	41464099	protein_coding	Dock4	exon	ENSMUSG00000035954	ProperStrand	41	chr19	42225881	42225897	protein_coding	Marveld1	utr3	ENSMUSG00000044345	NonProperStrand	112	1	-12.8307
chr8	86132222	86132241	protein_coding	Dnajb1	utr5	ENSMUSG00000005483	ProperStrand	5	chr5	115940325	115940386	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	1	-13.8972
chr2	119789904	119789943	protein_coding	Mga	exon	ENSMUSG00000033943	ProperStrand	180	chr1	24619307	24619350	protein_coding	Gm10222	exon	ENSMUSG00000067736	ProperStrand	42	2	-18.5382
chr1	123455872	123456741	protein_coding	Ddx18	exon	ENSMUSG00000001674	ProperStrand	41	chr2	26494708	26494800	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	3	-9.3841
chr1	88249720	88253223	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chr15	79908957	79909015	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	2	-1.2341
chr4	136101981	136101997	protein_coding	Luzp1	utr3	ENSMUSG00000001089	NonProperStrand	47	chr9	108475721	108475883	protein_coding	Wdr6	exon	ENSMUSG00000066357	ProperStrand	30	1	-15.2352
chr10	79326660	79326735	protein_coding	Ptbp1	utr3	ENSMUSG00000006498	ProperStrand	129	chr15	71624752	71624797	snoRNA	ENSMUSG00000088895_SNORA81	.	ENSMUSG00000088895	ProperStrand	348	1	-8.2597
chr9	64143850	64143877	protein_coding	Tipin	intron	ENSMUSG00000032397	ProperStrand	32	chr16	23111383	23111494	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-3.9978
chr17	29431000	29431100	protein_coding	BC004004	exon	ENSMUSG00000052712	ProperStrand	5	chr15	79913288	79913347	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-8.6129
chr2	26492903	26492956	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr15	82725599	82725637	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	1	-1.8120
chr12	102289583	102289614	protein_coding	Smek1	exon	ENSMUSG00000041846	ProperStrand	66	chr11	69483136	69483230	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-4.0783
chr5	74489231	74489331	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr17	35089181	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	4	-0.7497
chr1	172180215	172180231	protein_coding	Sh2d1b2	exon	ENSMUSG00000073494	NonProperStrand	1	chr5	130300419	130300465	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-inf
chr7	86279220	86279269	protein_coding	Mfge8	utr3	ENSMUSG00000030605	ProperStrand	73	chr12	17552951	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	2	-7.8038
chr16	45962739	45962765	protein_coding	Plcxd2	utr3	ENSMUSG00000087141	ProperStrand	4	chr17	24857716	24857767	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-7.6570
chr11	75546546	75565383	protein_coding	Ywhae	exon	ENSMUSG00000020849	ProperStrand	176	chr11	6519810	6519844	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-5.8140
chr14	70839358	70839597	protein_coding	Polr3d	exon	ENSMUSG00000000776	ProperStrand	16	chr17	66468411	66468427	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	1	-12.5416
chr2	104423391	104423408	LTR	RLTR28B	ERVL	chr2RLTR28B104423332	NonProperStrand	13	chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	1	-15.6708
chr18	74938054	74938134	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	NonProperStrand	6	chr18	74938214	74938317	snoRNA	ENSMUSG00000089235_SCARNA17	.	ENSMUSG00000089235	NonProperStrand	4	4	-inf
chr10	127522569	127522602	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr9	64025724	64025817	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	3	-9.9702
chr4	116991019	116991036	protein_coding	Rnf220	intron	ENSMUSG00000028677	ProperStrand	131	chr9	120039621	120039656	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.9742
chr13	24923673	24923727	protein_coding	Tdp2	exon	ENSMUSG00000035958	ProperStrand	11	chr7	29136613	29136651	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-9.2229
chr7	52309977	52309993	protein_coding	Prrg2	exon	ENSMUSG00000007837	NonProperStrand	281	chr15	76176093	76176120	protein_coding	Cyc1	exon	ENSMUSG00000022551	ProperStrand	47	1	-10.7106
chr14	19101521	19101611	protein_coding	Rpl15	utr3	ENSMUSG00000012405	ProperStrand	145	chr9	120039540	120039620	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.8141
chr15	99329179	99329195	protein_coding	Faim2	utr3	ENSMUSG00000023011	ProperStrand	45	chr4	131908689	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-8.7911
chr5	8976065	8976081	protein_coding	Crot	exon	ENSMUSG00000003623	NonProperStrand	1	chr1	162966813	162966829	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-inf
chr19	8963027	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	chrX	113862541	113862570	snoRNA	ENSMUSG00000088518_SNORA9	.	ENSMUSG00000088518	ProperStrand	280	4	-2.1856
chr2	26770283	26770339	protein_coding	Surf1	exon	ENSMUSG00000015790	ProperStrand	7	chr5	98946738	98946755	protein_coding	1700007G11Rik	intron	ENSMUSG00000057816	NonProperStrand	8	1	-19.0879
chr5	103321552	103321569	protein_coding	Arhgap24	exon	ENSMUSG00000057315	NonProperStrand	21	chr11	106362639	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-9.5207
chr2	162890199	162893898	protein_coding	Mybl2	exon	ENSMUSG00000017861	ProperStrand	230	chr1	165981777	165981793	protein_coding	Sele	exon	ENSMUSG00000026582	ProperStrand	1	1	-inf
chr15	103359681	103359698	protein_coding	Pde1b	utr3	ENSMUSG00000022489	ProperStrand	19	chr10	120298777	120298793	protein_coding	Msrb3	intron	ENSMUSG00000051236	ProperStrand	24	1	-17.3697
chr10	86164731	86164757	protein_coding	Hsp90b1	exon	ENSMUSG00000020048	ProperStrand	396	chr15	79908929	79909019	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-2.0291
chr2	90235285	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr12	12944235	12944251	protein_coding	Mycn	exon	ENSMUSG00000037169	NonProperStrand	109	1	-3.3473
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	107837983	107838000	protein_coding	Prkca	intron	ENSMUSG00000050965	NonProperStrand	10	1	-8.0457
chrX	103393396	103398652	protein_coding	Pgk1	utr3	ENSMUSG00000062070	ProperStrand	484	chr5	108336363	108336466	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	3	-3.8301
chr2	173158820	173158912	LINE	Lx2	L1	chr2Lx2173158573	ProperStrand	1	chrX	143566574	143566654	protein_coding	Htr2c	intron	ENSMUSG00000041380	ProperStrand	2	1	-inf
chr10	95010458	95010510	protein_coding	Nudt4	utr3	ENSMUSG00000020029	ProperStrand	32	chr11	97642989	97643079	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-6.1323
chr12	82050024	82050079	protein_coding-noncoding	Srsf5	utr5	ENSMUSG00000021134	ProperStrand	10	chr4	131908809	131908892	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.3231
chr3	101970863	101987932	protein_coding	Vangl1	exon	ENSMUSG00000027860	ProperStrand	25	chr5	130300464	130300544	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.1053
chr5	113515930	113515946	protein_coding	2900026A02Rik	utr3	ENSMUSG00000051339	NonProperStrand	29	chr12	17552964	17553034	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-6.5218
chr12	60476078	60476094	LTR	LTR16D	ERVL	chr12LTR16D60475969	NonProperStrand	17	chr9	120039533	120039604	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-5.7441
chr1	95717185	95717245	protein_coding	Ing5	utr3	ENSMUSG00000026283	ProperStrand	16	chr10	23505152	23505246	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-5.9181
mmu-miR-2137	0	18	miRNA	mmu-miR-2137	.	mmu-miR-2137	NonProperStrand	1	chr8	73419656	73419737	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	NonProperStrand	53	1	-inf
chr8	109173058	109177472	protein_coding	Cdh1	exon	ENSMUSG00000000303	ProperStrand	283	chr5	115983444	115983460	protein_coding	Pxn	intron	ENSMUSG00000029528	ProperStrand	171	1	-8.1094
chr11	59607837	59607897	protein_coding	Flcn	exon	ENSMUSG00000032633	ProperStrand	52	chr4	131908687	131908751	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.4243
chr11	77996339	77996405	protein_coding	Rpl23a	exon	ENSMUSG00000058546	ProperStrand	121	chr5	74489595	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	4	-9.0365
chr7	146084234	146084286	protein_coding	Bnip3	intron	ENSMUSG00000078566	ProperStrand	20	chr5	121655052	121655142	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.8755
chr5	135016842	135016858	protein_coding	Clip2	intron	ENSMUSG00000063146	ProperStrand	35	chr18	35714216	35714290	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.4569
chr4	24555744	24555770	protein_coding	Klhl32	intron	ENSMUSG00000040387	ProperStrand	67	chr7	116664794	116664924	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	22	-20.0422
chr7	52409137	52409196	protein_coding	Aldh16a1	intron	ENSMUSG00000007833	ProperStrand	27	chr10	110918549	110918639	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-4.9663
chr19	47713394	47716441	protein_coding	Slk	exon	ENSMUSG00000025060	ProperStrand	27	chr16	23111694	23111774	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.2801
chr8	126554349	126572004	protein_coding	Urb2	exon	ENSMUSG00000031976	ProperStrand	64	chr12	17552960	17553031	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	7	-20.8982
chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	chr16	20684331	20684387	snoRNA	ENSMUSG00000077239_Snord66	.	ENSMUSG00000077239	ProperStrand	159	1	-5.0714
chr3	20000532	20000622	protein_coding	Hltf	intron	ENSMUSG00000002428	NonProperStrand	4	chr3	20004402	20004492	protein_coding	Hltf	intron	ENSMUSG00000002428	ProperStrand	24	1	-20.7136
chr4	62626399	62626417	Simple_repeat	(CGCGG)n	Simple_repeat	chr4(CGCGG)n62626391	ProperStrand	1	chr16	23111448	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-inf
chr7	52382804	52382832	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	chr12	60774056	60774111	snoRNA	ENSMUSG00000077603_SNORA3	.	ENSMUSG00000077603	ProperStrand	185	1	-4.5567
chr4	128867196	128867212	protein_coding	Yars	exon	ENSMUSG00000028811	ProperStrand	131	chr7	104548778	104548812	protein_coding	Ndufc2	exon	ENSMUSG00000030647	ProperStrand	10	1	-15.4032
chr6	39349081	39349151	protein_coding	Mkrn1	utr3	ENSMUSG00000029922	ProperStrand	177	chr11	74795362	74795395	protein_coding	Smg6	exon	ENSMUSG00000038290	ProperStrand	29	2	-21.1316
chr7	145023502	145023582	LTR	MER21B	ERV1	chr7MER21B145023480	ProperStrand	1	chr7	145023633	145023723	LTR	MER21B	ERV1	chr7MER21B145023618	ProperStrand	1	1	-inf
chr9	95763269	95763309	protein_coding	Atr	exon	ENSMUSG00000032409	ProperStrand	44	chr1	162966189	162966216	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-8.1968
chr6	51412062	51412135	protein_coding	Hnrnpa2b1	utr3	ENSMUSG00000004980	ProperStrand	166	chr7	52382235	52382275	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	2	-10.1435
chr1	65206107	65207658	protein_coding	Idh1	exon	ENSMUSG00000025950	ProperStrand	17	chr16	23111704	23111794	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-7.0267
chr2	129627566	129627640	protein_coding	Stk35	exon	ENSMUSG00000037885	ProperStrand	28	chr19	8800393	8800483	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-4.9806
chr5	122266114	122266153	protein_coding	Sh2b3	utr3	ENSMUSG00000042594	ProperStrand	7	chr4	131908236	131908355	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-13.1071
chr12	111931017	111931055	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr6	71832596	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	26	-19.1817
chr2	129998665	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr16	38522580	38522598	protein_coding	4930455C21Rik	exon	ENSMUSG00000002846	NonProperStrand	11	1	-11.5672
chr15	88977274	88977290	protein_coding	Mapk11	intron	ENSMUSG00000053137	NonProperStrand	29	chr9	120039533	120039622	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-4.6899
chr10	62275134	62275150	protein_coding	Tet1	utr3	ENSMUSG00000047146	NonProperStrand	7	chr6	71832550	71832604	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-9.9932
chr11	42440243	42440259	protein_coding	Gabrb2	exon	ENSMUSG00000007653	ProperStrand	248	chr19	45308496	45308513	protein_coding	Lbx1	exon	ENSMUSG00000025216	ProperStrand	23	1	-12.4091
chr9	78023159	78023183	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr15	77597977	77597993	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	1	-1.7834
chr2	83644877	83644894	protein_coding	Itgav	utr3	ENSMUSG00000027087	NonProperStrand	33	chrX	70686865	70686908	protein_coding	Haus7	intron	ENSMUSG00000031371	ProperStrand	2	1	-inf
chr15	34370539	34370567	protein_coding-noncoding	Rpl30	utr3	ENSMUSG00000058600	ProperStrand	30	chr7	29136525	29136595	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.6017
chr2	178194847	178194864	protein_coding	Cdh26	exon	ENSMUSG00000039155	NonProperStrand	77	chr14	52829493	52829569	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-7.7040
chr17	13115767	13115789	protein_coding	Tcp1	intron	ENSMUSG00000068039	ProperStrand	116	chr10	23505152	23505219	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-1.0680
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr2	129627400	129627416	protein_coding	Stk35	exon	ENSMUSG00000037885	NonProperStrand	10	1	-11.9753
chr15	5139734	5139750	protein_coding	Ttc33	exon	ENSMUSG00000022151	NonProperStrand	1	chr16	23110960	23111003	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr15	69211372	69211452	LINE	Lx5	L1	chr15Lx569210326	NonProperStrand	1	chr15	86184002	86184092	protein_coding	Tbc1d22a	intron	ENSMUSG00000051864	NonProperStrand	5	1	-inf
chr3	153991597	153991614	protein_coding	Lhx8	utr5	ENSMUSG00000093486	NonProperStrand	47	chr11	6428108	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.6401
chr14	76247720	76247800	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	chr16	87419193	87419283	snoRNA	ENSMUSG00000065647_SNORA2	.	ENSMUSG00000065647	ProperStrand	123	1	-2.8563
chrX	20094275	20094311	protein_coding	Phf16	exon	ENSMUSG00000037315	ProperStrand	22	chr4	131908689	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.8292
chr6	96322858	96322874	protein_coding	Fam19a1	intron	ENSMUSG00000059187	NonProperStrand	60	chr2	157383955	157383982	protein_coding	Blcap	utr5	ENSMUSG00000067787	ProperStrand	13	1	-16.4107
chr2	119456147	119459468	protein_coding	Nusap1	exon	ENSMUSG00000027306	ProperStrand	11	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-12.4416
chr7	133436608	133436630	protein_coding	Sbk1	utr3	ENSMUSG00000042978	ProperStrand	24	chr17	35087894	35087949	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-7.0148
chr9	63066908	63066926	protein_coding	Map2k5	intron	ENSMUSG00000058444	NonProperStrand	79	chr11	6520372	6520459	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	1	-7.1695
chr10	39978350	39978440	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	NonProperStrand	27	chr14	33005139	33005229	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	NonProperStrand	13	5	-20.3134
chr1	183746966	183746995	protein_coding	Lbr	utr3	ENSMUSG00000004880	ProperStrand	97	chr11	55296231	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-5.2399
chr15	99329179	99329195	protein_coding	Faim2	utr3	ENSMUSG00000023011	ProperStrand	45	chr15	5068429	5068480	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-6.6364
chr1	36864913	36864975	protein_coding	Tmem131	exon	ENSMUSG00000026116	ProperStrand	129	chr11	69483134	69483237	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	5	-7.2494
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr10	117227045	117227061	protein_coding	Nup107	exon	ENSMUSG00000052798	NonProperStrand	66	1	-9.1781
chr3	88368393	88368946	protein_coding	Ubqln4	exon	ENSMUSG00000008604	ProperStrand	49	chr6	149131943	149131973	protein_coding	Amn1	exon	ENSMUSG00000068250	ProperStrand	10	4	-inf
chr16	36886302	36887328	antisense	4930565N06Rik	.	ENSMUSG00000084834	ProperStrand	27	chr9	120038466	120038550	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.5315
chr13	9833561	9833660	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr11	51551280	51551316	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	2	-1.0726
chr4	32076921	32078708	protein_coding	Map3k7	exon	ENSMUSG00000028284	ProperStrand	16	chr10	110918553	110918633	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-6.0058
chr2	25312429	25313191	protein_coding	Clic3	exon	ENSMUSG00000015093	ProperStrand	79	chr12	88778746	88778768	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-5.9553
chr8	3610041	3610118	protein_coding	Xab2	utr3	ENSMUSG00000019470	ProperStrand	52	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-2.7859
chr9	59519820	59523414	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr9	15123939	15123964	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	NonProperStrand	100	1	-6.1677
chr15	98428804	98428820	protein_coding	Adcy6	exon	ENSMUSG00000022994	ProperStrand	50	chrX	84483703	84483741	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-8.6145
chr19	24169796	24169896	protein_coding	Tjp2	utr3	ENSMUSG00000024812	ProperStrand	63	chr10	110918624	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-3.3594
chr5	125504593	125504624	protein_coding	Ncor2	exon	ENSMUSG00000029478	ProperStrand	377	chr17	24343586	24343602	protein_coding	Ntn3	exon	ENSMUSG00000079662	ProperStrand	237	1	-6.8944
chr5	121655016	121655141	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	chr17	24856620	24856742	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	23	-13.7321
chr17	4082121	4082156	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr2	158185535	158185652	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-3.2913
chr17	56560689	56560737	protein_coding	Ptprs	exon	ENSMUSG00000013236	ProperStrand	152	chr17	12860706	12860722	protein_coding	Slc22a1	intron	ENSMUSG00000023829	NonProperStrand	11	1	-14.9102
chr7	29136602	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	chr4	3762254	3762293	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	3	-0.7812
chr3	96132424	96132514	snRNA	ENSMUSG00000075978_U1	.	ENSMUSG00000075978	ProperStrand	132	chr11	69483200	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.2297
chrX	140808138	140808228	protein_coding-noncoding	Alg13	utr3	ENSMUSG00000041718	ProperStrand	87	chr7	67123714	67123759	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	1	-8.7940
chr13	72763664	72763680	antisense	Gm20554	.	ENSMUSG00000093587	NonProperStrand	40	chr18	35716750	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.8651
chr18	67561956	67561995	protein_coding	Tubb6	exon	ENSMUSG00000001473	ProperStrand	10	chr19	43579408	43579425	protein_coding	Got1	intron	ENSMUSG00000025190	NonProperStrand	147	1	-15.1747
chr18	77368800	77371867	protein_coding	Pias2	exon	ENSMUSG00000025423	ProperStrand	52	chr3	123210852	123210920	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.3028
chr8	38049667	38049683	LTR	MLT1A0	MaLR	chr8MLT1A038049422	NonProperStrand	91	chr9	61762184	61762245	protein_coding	Rplp1	utr5	ENSMUSG00000007892	ProperStrand	116	1	-11.1524
chr19	44380377	44380467	protein_coding	Scd2	utr3	ENSMUSG00000025203	ProperStrand	219	chr12	106269298	106269378	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	3	-5.1854
chr17	43804486	43804502	protein_coding	Cyp39a1	utr5	ENSMUSG00000023963	NonProperStrand	81	chr2	76141965	76141987	protein_coding	Pde11a	intron	ENSMUSG00000075270	ProperStrand	11	1	-16.1466
chr4	135846171	135846187	protein_coding	Zfp46	exon	ENSMUSG00000051351	NonProperStrand	85	chr7	29136525	29136586	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-3.2960
chr17	39979943	39980012	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr2	145076805	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	3	-5.4775
chr5	77744891	77744922	protein_coding	Polr2b	exon	ENSMUSG00000029250	ProperStrand	68	chr5	130300474	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.2975
chr7	151472650	151472667	protein_coding	Shank2	exon	ENSMUSG00000037541	NonProperStrand	17	chr17	13112451	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-7.0739
chr1	182530665	182530707	protein_coding	Parp1	utr3	ENSMUSG00000026496	ProperStrand	227	chr16	35932620	35932636	protein_coding	Dtx3l	exon	ENSMUSG00000049502	ProperStrand	152	1	-8.7829
chr7	71199474	71199564	LTR	MTC	MaLR	chr7MTC71199377	NonProperStrand	1	chr7	71199167	71199257	LTR	RMER17B	ERVK	chr7RMER17B71199102	NonProperStrand	1	1	-inf
chr7	52715004	52715104	protein_coding	Ftl1	utr5	ENSMUSG00000050708	ProperStrand	807	chr1	162968460	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-1.4196
chr18	10812824	10812903	protein_coding	Mib1	utr3	ENSMUSG00000024294	ProperStrand	27	chr5	14252800	14252816	protein_coding	Sema3e	utr3	ENSMUSG00000063531	ProperStrand	125	1	-13.4546
chr15	76288447	76288463	protein_coding	Scx	exon	ENSMUSG00000034161	ProperStrand	7	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-10.2305
chr15	102149948	102150048	protein_coding	Espl1	exon	ENSMUSG00000058290	ProperStrand	172	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-1.7816
chr17	35989619	35989635	protein_coding	Mdc1	exon	ENSMUSG00000061607	NonProperStrand	11	chr5	130300460	130300550	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-5.7288
chr2	90235294	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr16	91658650	91658716	protein_coding	Son	exon	ENSMUSG00000022961	ProperStrand	59	4	-14.2930
chr4	118781440	118781563	protein_coding	Slc2a1	utr5	ENSMUSG00000028645	ProperStrand	361	chr18	33954922	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-0.7295
chr1	162967137	162967178	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	chr1	9932554	9932626	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-3.2637
chr10	105010104	105010121	protein_coding	Tmtc2	intron	ENSMUSG00000036019	NonProperStrand	14	chr3	123210854	123210956	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	8	-22.6211
chr11	53075010	53075028	protein_coding	Hspa4	utr3	ENSMUSG00000020361	ProperStrand	69	chr4	131908236	131908297	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.2232
chr16	17643721	17643738	protein_coding	Smpd4	utr3	ENSMUSG00000005899	ProperStrand	33	chr8	73419657	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-4.2424
chr4	135607571	135608591	protein_coding	Rpl11	exon	ENSMUSG00000059291	ProperStrand	152	chr16	23110466	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	8	-12.2170
chr2	128652064	128679402	protein_coding	Tmem87b	exon	ENSMUSG00000014353	ProperStrand	10	chr4	131908689	131908867	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-10.8073
chr13	54629824	54630541	protein_coding	4732471D19Rik	exon	ENSMUSG00000043183	ProperStrand	2	chr4	131908689	131908729	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-8.0336
chr9	120038568	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	chr10	90644163	90644194	tRNA	tRNA857-TrpCCA	.	1035502	ProperStrand	23	3	-11.5911
chr1	154965191	154965256	protein_coding	Nmnat2	utr3	ENSMUSG00000042751	ProperStrand	39	chr1	162966000	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-4.4154
chr19	8798484	8798553	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	chr9	15119971	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	8	-7.4686
chr12	87861890	87861932	protein_coding	Esrrb	utr3	ENSMUSG00000021255	ProperStrand	254	chr4	122968671	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-3.5158
chr7	52397253	52397340	protein_coding	Aldh16a1	utr3	ENSMUSG00000007833	ProperStrand	27	chr2	32818825	32818915	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	2	-11.3802
chr10	29179827	29179849	protein_coding	Rspo3	intron	ENSMUSG00000019880	NonProperStrand	3	chr7	118219574	118219671	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-10.4323
chr7	94023890	94023906	LTR	RLTR1B-int	ERV1	chr7RLTR1B-int94022684	NonProperStrand	15	chr3	54941638	54941655	protein_coding	A730037C10Rik	utr5	ENSMUSG00000048655	ProperStrand	2	1	-inf
chr15	75294302	75294320	LTR	MTEa	MaLR	chr15MTEa75294115	ProperStrand	2	chr4	116488426	116488621	protein_coding	Mutyh	exon	ENSMUSG00000028687	ProperStrand	7	1	-inf
chr13	108515657	108515709	protein_coding	Zswim6	utr3	ENSMUSG00000032846	ProperStrand	23	chr19	28606078	28606094	protein_coding	Glis3	exon	ENSMUSG00000052942	NonProperStrand	14	1	-18.4068
chr1	152287303	152287362	protein_coding	Tpr	utr3	ENSMUSG00000006005	ProperStrand	542	chr3	138405312	138405330	protein_coding	Tspan5	utr5	ENSMUSG00000028152	NonProperStrand	5	1	-14.0745
chr10	17443077	17443096	protein_coding	Cited2	utr5	ENSMUSG00000039910	ProperStrand	64	chr18	35716788	35716835	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.0639
chrX	50596935	50596967	protein_coding	Fam122b	utr3	ENSMUSG00000036022	ProperStrand	20	chr16	23110852	23110942	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-3.0614
chr8	109184912	109185809	protein_coding	Cdh1	exon	ENSMUSG00000000303	ProperStrand	283	chr8	73419657	73419741	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-2.6142
chr2	158185564	158185654	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr9	64022855	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-1.6567
chr12	11098800	11098817	protein_coding	Kcns3	exon	ENSMUSG00000043673	NonProperStrand	7	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-12.5780
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr4	118214330	118214365	protein_coding	Tmem125	exon	ENSMUSG00000050854	ProperStrand	2	1	-16.4000
chr3	90331179	90331195	protein_coding	S100a14	utr5	ENSMUSG00000042306	NonProperStrand	2	chr19	8800355	8800460	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	NonProperStrand	18	2	-inf
chr7	29171541	29171558	protein_coding	Med29	utr3	ENSMUSG00000003444	NonProperStrand	134	chr18	33954848	33954948	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-2.1028
chr14	25673634	25673651	DNA	MER63D	AcHobo	chr14MER63D25673510	NonProperStrand	65	chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-6.2960
chr5	140247299	140247389	protein_coding	Ints1	exon	ENSMUSG00000029547	ProperStrand	45	chr10	23505155	23505204	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.6487
chr4	102236212	102236229	protein_coding	Pde4b	intron	ENSMUSG00000028525	ProperStrand	35	chr1	63225253	63225284	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	1	-9.9215
chr9	122993355	122993412	protein_coding	Zdhhc3	exon	ENSMUSG00000025786	ProperStrand	8	chr16	23110986	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-12.0409
chr1	135550688	135550735	protein_coding	Zc3h11a	intron	ENSMUSG00000026464	ProperStrand	102	chr11	69481360	69481450	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-2.2759
chr6	25638699	25638715	protein_coding	Gpr37	exon	ENSMUSG00000039904	ProperStrand	49	chr7	52382787	52382832	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-7.1547
chr9	72970295	72970335	protein_coding	Rsl24d1	utr3	ENSMUSG00000032215	ProperStrand	8	chr4	116826700	116826722	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-10.8996
chr15	22578450	22578467	protein_coding	Cdh18	intron	ENSMUSG00000040420	NonProperStrand	26	chr12	112779146	112779214	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-6.4195
chr7	29595983	29596054	protein_coding	Hnrnpl	exon	ENSMUSG00000015165	ProperStrand	150	chr18	49915125	49915142	protein_coding	Dtwd2	exon	ENSMUSG00000024505	ProperStrand	11	1	-14.9430
chr7	30231467	30231592	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	5	-7.3664
chr12	88912985	88913005	protein_coding	Gm2022	intron	ENSMUSG00000071217	NonProperStrand	57	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-3.6984
chr16	57391762	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr3	85941938	85942432	protein_coding	Rps3a	exon	ENSMUSG00000028081	ProperStrand	177	2	-9.2248
chr11	84333854	84333872	protein_coding	Lhx1	exon	ENSMUSG00000018698	NonProperStrand	5	chr17	24857715	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-11.8657
chr8	72432994	72441958	protein_coding	Gatad2a	exon	ENSMUSG00000036180	ProperStrand	112	chr8	73419657	73419789	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-3.7056
chrX	136242613	136242631	protein_coding	Tbc1d8b	intron	ENSMUSG00000042473	NonProperStrand	27	chr16	23110526	23110571	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.9061
chr2	120980454	120980504	protein_coding	Adal	exon	ENSMUSG00000027259	ProperStrand	2	chr7	29136549	29136649	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-9.5181
chr10	67373213	67373229	protein_coding	Zfp365	intron	ENSMUSG00000037855	ProperStrand	9	chr8	73419680	73419723	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-6.8403
chr8	125418803	125418819	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	chr2	32819451	32819478	protein_coding	Rpl12	intron	ENSMUSG00000038900	ProperStrand	167	1	-7.5717
chr6	30775665	30776144	protein_coding	Copg2	exon	ENSMUSG00000025607	ProperStrand	11	chr17	35299506	35299606	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-8.1746
chr7	29107138	29107245	protein_coding	Supt5h	exon	ENSMUSG00000003435	ProperStrand	123	chr7	30026273	30026289	protein_coding	Yif1b	intron	ENSMUSG00000030588	ProperStrand	154	1	-9.9807
chr6	47731687	47731721	misc_RNA	Y_RNA	.	ENSMUSG00000064945	ProperStrand	93	chr12	71146434	71146534	protein_coding	Nin	exon	ENSMUSG00000021068	ProperStrand	95	24	-19.7116
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr11	116535923	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	5	-13.6627
chr17	35972423	35972484	protein_coding	Tubb5	exon	ENSMUSG00000001525	NonProperStrand	5	chr1	155287323	155287355	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	NonProperStrand	3	1	-inf
chr4	107848510	107848550	protein_coding	Echdc2	intron	ENSMUSG00000028601	NonProperStrand	12	chr1	9932550	9932617	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	3	-inf
chr19	23332023	23332040	protein_coding	Smc5	exon	ENSMUSG00000024943	ProperStrand	146	chr9	30911382	30913629	protein_coding	St14	exon	ENSMUSG00000031995	ProperStrand	90	1	-10.7138
chr11	116535465	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr9	120039533	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	12	-0.7822
chr9	65127126	65127142	protein_coding	Cilp	exon	ENSMUSG00000042254	ProperStrand	212	chr11	62418013	62418070	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-3.1721
chr14	97917834	97917924	LINE	L1Md_F2	L1	chr14L1Md_F297917445	ProperStrand	1	chr7	5361125	5361205	protein_coding	Vmn1r58	utr3	ENSMUSG00000078808	ProperStrand	5	1	-inf
chr8	87574288	87574355	protein_coding	Tnpo2	exon	ENSMUSG00000031691	ProperStrand	92	chr4	131908759	131908849	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-1.4669
chr15	98428804	98428820	protein_coding	Adcy6	exon	ENSMUSG00000022994	ProperStrand	50	chr17	13112450	13112528	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	3	-11.6686
chr5	77736605	77738918	protein_coding	Noa1	exon	ENSMUSG00000036285	ProperStrand	147	chr16	23111694	23111787	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-1.4486
chr15	102240033	102240133	protein_coding	Sp1	exon	ENSMUSG00000001280	ProperStrand	124	chr2	152771639	152771657	protein_coding	Dusp15	intron	ENSMUSG00000042662	ProperStrand	17	1	-14.4229
chr6	120990505	120992017	protein_coding	Mical3	utr5	ENSMUSG00000003178	ProperStrand	9	chr15	79913288	79913321	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-7.3434
chr8	80126806	80128595	protein_coding	Tmem184c	exon	ENSMUSG00000031617	ProperStrand	5	chr18	35716694	35716762	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-6.9999
chr13	70776149	70776165	protein_coding	BC018507	intron	ENSMUSG00000034525	NonProperStrand	7	chr14	35487328	35487356	protein_coding	Wapal	utr5	ENSMUSG00000041408	ProperStrand	93	1	-16.8121
chr17	27957279	27957296	protein_coding	D17Wsu92e	utr5	ENSMUSG00000056692	NonProperStrand	11	chr9	120039605	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-6.6296
chr15	102321220	102328964	protein_coding	Pcbp2	utr3	ENSMUSG00000056851	ProperStrand	164	chr2	26494708	26494808	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	7	-12.2420
chr15	78173664	78173681	protein_coding	Csf2rb	intron	ENSMUSG00000071713	ProperStrand	16	chr7	116664793	116664873	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-5.0191
chr4	149009359	149009397	protein_coding	Clstn1	exon	ENSMUSG00000039953	ProperStrand	173	chr2	32818840	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-3.4598
chr4	66326378	66326396	SINE	PB1D10	Alu	chr4PB1D1066326381	ProperStrand	3	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-11.5113
chr2	90235296	90235340	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	79138266	79138282	protein_coding	Gm16517	exon	ENSMUSG00000020308	ProperStrand	43	2	-8.4172
chr1	134401005	134401021	protein_coding	Rbbp5	utr3	ENSMUSG00000026439	NonProperStrand	33	chr5	54389949	54389966	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	1	-11.9887
chr8	48972477	48972493	protein_coding	Wwc2	exon	ENSMUSG00000031563	NonProperStrand	56	chr7	54443918	54443962	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-9.8680
chr9	120038455	120040273	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	chr19	8800355	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	9	-11.1066
chr5	37707578	37707594	protein_coding	Evc	exon	ENSMUSG00000029122	ProperStrand	14	chr17	10399845	10399905	protein_coding	Qk	utr3	ENSMUSG00000062078	ProperStrand	63	1	-16.2166
chr7	53338973	53339073	protein_coding	Nomo1	exon	ENSMUSG00000030835	ProperStrand	85	chr17	24857815	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.7363
chr2	25374624	25374666	protein_coding	Traf2	utr3	ENSMUSG00000026942	ProperStrand	3	chr16	23111731	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-7.8619
chr4	132530097	132530117	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	chr8	73419657	73419790	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	7	-6.5087
chr11	69414482	69414498	protein_coding	Atp1b2	utr3	ENSMUSG00000041329	ProperStrand	28	chr9	120038552	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.4612
chr14	70716398	70718535	protein_coding	Slc39a14	exon	ENSMUSG00000022094	ProperStrand	17	chr7	117190018	117190063	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-5.7589
chr5	121655016	121655097	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	NonProperStrand	38	chr11	68886976	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	NonProperStrand	12	1	-17.6232
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr7	30231493	30231592	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	2	-7.4954
chr7	86812625	86812664	protein_coding	5730590G19Rik	exon	ENSMUSG00000046591	ProperStrand	45	chr16	23111735	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.3757
chr4	138847046	138847116	protein_coding	Capzb	utr3	ENSMUSG00000028745	ProperStrand	44	chr11	74712705	74712782	protein_coding	Tsr1	exon	ENSMUSG00000038335	ProperStrand	48	17	-20.9154
chr13	22127012	22127102	protein_coding	Hist1h2ah	utr3	ENSMUSG00000069302	ProperStrand	12	chr17	24857717	24857797	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-5.3067
chr7	36078703	36078737	protein_coding	Gpatch1	exon	ENSMUSG00000063808	ProperStrand	6	chr4	131908804	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.3738
chr2	90235298	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	75071970	75071987	protein_coding	Med26	utr5	ENSMUSG00000045248	ProperStrand	45	1	-5.0171
chr5	21302166	21302256	protein_coding-noncoding	Psmc2	utr5	ENSMUSG00000028932	NonProperStrand	1	chr5	21301660	21302438	protein_coding	Psmc2	exon	ENSMUSG00000028932	NonProperStrand	1	1	-inf
chr5	134893049	134931995	protein_coding	Gtf2ird1	utr5	ENSMUSG00000023079	ProperStrand	85	chr11	6428099	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.5769
chr2	162900420	162900446	protein_coding	Mybl2	exon	ENSMUSG00000017861	ProperStrand	230	chr5	121828827	121828843	protein_coding	Trafd1	exon	ENSMUSG00000042726	ProperStrand	81	1	-10.0160
chr5	145886311	145886372	protein_coding	Arpc1b	intron	ENSMUSG00000029622	NonProperStrand	3	chr5	14252800	14252816	protein_coding	Sema3e	utr3	ENSMUSG00000063531	ProperStrand	125	1	-18.0794
chr11	69548038	69548118	protein_coding	Polr2a	exon	ENSMUSG00000005198	ProperStrand	200	chr8	73419657	73419747	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	7	-10.8923
chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	chr2	145076803	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-3.7440
chr2	132078599	132078666	protein_coding	Pcna	exon	ENSMUSG00000027342	ProperStrand	25	chr9	120038559	120038590	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.6808
chr11	97579972	97579999	protein_coding	Pip4k2b	utr3	ENSMUSG00000018547	ProperStrand	46	chr17	24665420	24665496	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	2	-8.9484
chr15	76735257	76735361	protein_coding	Rpl8	exon	ENSMUSG00000003970	ProperStrand	191	chr17	24665420	24665460	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-2.7921
chr3	88129831	88130087	protein_coding	0610031J06Rik	exon	ENSMUSG00000001418	ProperStrand	9	chr11	68887039	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	3	-17.8462
chr4	22414139	22414155	protein_coding	Pou3f2	exon	ENSMUSG00000052621	NonProperStrand	90	chr15	34370629	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-2.8180
chr11	103221001	103221017	antisense	Gm11647	.	ENSMUSG00000085360	ProperStrand	22	chr11	84722945	84722961	protein_coding	Myo19	exon	ENSMUSG00000020527	ProperStrand	82	1	-14.7110
chr12	111866152	111866169	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr1	174437284	174437318	protein_coding	Tagln2	utr3	ENSMUSG00000026547	ProperStrand	39	1	-9.4188
chr16	33496339	33496355	protein_coding	Zfp148	exon	ENSMUSG00000022811	ProperStrand	10	chr16	44218653	44218685	protein_coding	Gm608	exon	ENSMUSG00000068284	ProperStrand	17	1	-19.5107
chr8	3603828	3605224	protein_coding	Camsap3	exon	ENSMUSG00000044433	ProperStrand	86	chr16	23111373	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-1.6479
chr9	107755720	107755762	protein_coding	Rbm6	utr5	ENSMUSG00000032582	ProperStrand	9	chr10	57734240	57734330	protein_coding	Gcc2	exon	ENSMUSG00000038039	ProperStrand	9	2	-20.3845
chr13	108875645	108875662	protein_coding	Ndufaf2	intron	ENSMUSG00000068184	ProperStrand	11	chr4	131865920	131865981	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.8470
chr18	60975989	60976089	protein_coding	Tcof1	utr3	ENSMUSG00000024613	ProperStrand	68	chr18	75160712	75160776	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	1	-8.9368
chr2	143780929	143782507	protein_coding	Rrbp1	exon	ENSMUSG00000027422	ProperStrand	76	chr1	162965534	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-4.9565
chr18	36753950	36772800	protein_coding	Ankhd1	utr5	ENSMUSG00000024483	ProperStrand	56	chr3	123210854	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	7	-15.9779
chr8	113774045	113774135	protein_coding	Glg1	intron	ENSMUSG00000003316	NonProperStrand	3	chr11	19864962	19865042	protein_coding	Spred2	intron	ENSMUSG00000045671	ProperStrand	106	1	-18.8398
chr17	7505746	7505844	protein_coding	Rps6ka2	utr3	ENSMUSG00000023809	ProperStrand	47	chr17	35089180	35089220	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-5.9647
chr8	119104716	119104816	protein_coding	Cdyl2	intron	ENSMUSG00000031758	ProperStrand	35	chr7	116664856	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.5143
chr5	74489203	74489330	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr2	70927899	70927915	protein_coding	Dcaf17	exon	ENSMUSG00000041966	NonProperStrand	89	1	-4.8559
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr2	109516283	109516300	protein_coding	Bdnf	utr5	ENSMUSG00000048482	NonProperStrand	47	1	-6.3857
chr15	97944664	97944681	protein_coding	Pfkm	intron	ENSMUSG00000033065	ProperStrand	8	chr7	4691730	4691749	protein_coding	Suv420h2	utr5	ENSMUSG00000059851	NonProperStrand	70	1	-17.0617
chrX	147525259	147526242	protein_coding	Tsr2	exon	ENSMUSG00000025264	ProperStrand	3	chr6	94776857	94776875	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	1	-15.4876
chr19	27869678	27869768	protein_coding	Rfx3	intron	ENSMUSG00000040929	NonProperStrand	3	chr19	27869129	27869209	protein_coding	Rfx3	intron	ENSMUSG00000040929	ProperStrand	92	1	-19.5967
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	25601154	25601171	protein_coding	Dmrt1	intron	ENSMUSG00000024837	ProperStrand	20	1	-6.6233
chr7	119934438	119934484	protein_coding	Tead1	intron	ENSMUSG00000055320	ProperStrand	217	chr5	134722472	134723091	protein_coding	Gtf2i	exon	ENSMUSG00000060261	ProperStrand	41	4	-20.5422
chr2	165904622	165904638	protein_coding	Sulf2	exon	ENSMUSG00000006800	ProperStrand	171	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-8.6656
chr2	23011328	23011344	protein_coding	Mastl	exon	ENSMUSG00000026779	ProperStrand	60	chr4	116827147	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-7.0403
chr4	133801679	133801695	lincRNA	E130218I03Rik	exon	ENSMUSG00000086322	NonProperStrand	43	chr1	162967489	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.0966
chr4	53075377	53075412	protein_coding	Abca1	exon	ENSMUSG00000015243	ProperStrand	15	chr18	33954828	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-10.1387
chr15	77356785	77356801	protein_coding	Apol7c	exon	ENSMUSG00000044309	ProperStrand	197	chr2	91436228	91436260	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-5.1592
chr10	118648962	118649012	protein_coding	Cand1	exon	ENSMUSG00000020114	ProperStrand	76	chrX	130496426	130496668	protein_coding	Sytl4	exon	ENSMUSG00000031255	ProperStrand	169	1	-10.7602
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr7	13631110	13631127	protein_coding	Mzf1	intron	ENSMUSG00000030380	NonProperStrand	14	1	-8.8326
chr9	57385425	57385441	protein_coding	2310046O06Rik	utr5	ENSMUSG00000032305	ProperStrand	135	chr7	117190014	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-1.9383
chr12	77383926	77402353	protein_coding	Mthfd1	exon	ENSMUSG00000021048	ProperStrand	71	chr4	131908236	131908347	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-2.2960
chr13	40982775	40982791	protein_coding	Gcnt2	exon	ENSMUSG00000021360	ProperStrand	31	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.0160
chr11	97891128	97891180	protein_coding	Rpl19	exon	ENSMUSG00000017404	ProperStrand	120	chr13	112540780	112541440	protein_coding	Map3k1	exon	ENSMUSG00000021754	ProperStrand	113	1	-10.6501
chr13	23662861	23662951	protein_coding	Hist1h2ae	exon	ENSMUSG00000069272	ProperStrand	51	chr16	23110909	23110993	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-5.3684
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr19	8963032	8963048	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-5.5980
chr4	125951138	125951228	protein_coding	Trappc3	exon	ENSMUSG00000028847	ProperStrand	15	chr7	116663668	116663748	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-5.1056
chrX	69814993	69815016	protein_coding	Gabra3	intron	ENSMUSG00000031343	ProperStrand	2	chr1	89681187	89681277	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-12.8594
chr2	4918150	4918240	protein_coding	Mcm10	exon	ENSMUSG00000026669	ProperStrand	21	chr6	71832600	71832690	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	2	-12.3770
chr6	9143822	9143841	protein_coding	Nxph1	intron	ENSMUSG00000046178	ProperStrand	16	chr4	138963727	138963767	protein_coding	Ubr4	exon	ENSMUSG00000066036	ProperStrand	304	1	-12.7487
chr8	87620608	87620633	protein_coding	Man2b1	exon	ENSMUSG00000005142	ProperStrand	27	chr11	6520321	6520431	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	5	-inf
chr6	33617655	33617720	protein_coding	Exoc4	intron	ENSMUSG00000029763	ProperStrand	120	chr3	123210882	123210972	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.0510
chr2	156003462	156003486	protein_coding-noncoding	Rbm39	utr3	ENSMUSG00000027620	ProperStrand	2	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-14.6821
mmu-miR-6238	1	18	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr15	79913288	79913343	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-1.2931
chr15	17759579	17759599	LTR	MTC	MaLR	chr15MTC17759301	NonProperStrand	1	chr7	52974684	52974963	protein_coding	Rpl18	exon	ENSMUSG00000059070	NonProperStrand	2	1	-inf
chr7	4745145	4745213	protein_coding	Rpl28	exon	ENSMUSG00000030432	ProperStrand	220	chr2	26494708	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	5	-6.4196
chr11	67167096	67167112	protein_coding	Myh13	exon	ENSMUSG00000060180	ProperStrand	145	chr7	52382237	52382258	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-6.5303
chr8	90723143	90723159	protein_coding	Papd5	utr5	ENSMUSG00000036779	ProperStrand	32	chrX	84483699	84483728	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-9.5139
chr7	108812620	108812720	protein_coding	Clpb	exon	ENSMUSG00000001829	ProperStrand	44	chr5	74489618	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-4.3638
chr5	114698519	114698599	protein_coding-noncoding	Acacb	utr5	ENSMUSG00000042010	ProperStrand	1	chr5	114698582	114698672	protein_coding	Acacb	exon	ENSMUSG00000042010	ProperStrand	7	1	-inf
chr1	164569797	164569813	protein_coding	Myoc	exon	ENSMUSG00000026697	ProperStrand	7	chr18	73693169	73693187	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-9.9039
chr15	54891493	54891547	protein_coding	Taf2	exon	ENSMUSG00000037343	ProperStrand	18	chr7	52713407	52713457	protein_coding	Ftl1	utr3	ENSMUSG00000050708	ProperStrand	807	1	-10.5532
mmu-miR-6240	5	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr3	89800728	89800783	protein_coding	Hax1	intron	ENSMUSG00000027944	ProperStrand	7	1	-10.2930
chr8	107783510	107783527	protein_coding	Tradd	exon	ENSMUSG00000031887	ProperStrand	23	chr11	69481389	69481479	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.0170
chr4	144754462	144754539	protein_coding	Vps13d	exon	ENSMUSG00000020220	ProperStrand	59	chr15	79908929	79908983	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-5.5054
chr9	99476349	99476449	protein_coding	Dbr1	exon	ENSMUSG00000032469	ProperStrand	162	chr1	63225254	63225322	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	1	-6.8584
chr5	143874599	143874615	protein_coding	Rnf216	utr5	ENSMUSG00000045078	NonProperStrand	29	chr7	148634702	148634837	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	6	-inf
chr2	146125208	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	chr11	69483136	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	5	-5.4592
chr4	140528827	140528868	protein_coding	Sdhb	exon	ENSMUSG00000009863	ProperStrand	14	chr1	84829653	84829675	protein_coding	Trip12	intron	ENSMUSG00000026219	NonProperStrand	8	1	-19.6086
chr2	164249943	164249961	protein_coding	Sdc4	utr3	ENSMUSG00000017009	ProperStrand	177	chr16	58435561	58435578	protein_coding	Dcbld2	intron	ENSMUSG00000035107	ProperStrand	56	1	-11.2818
chr11	6520321	6520423	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	chr1	89681130	89681177	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-0.7481
chr4	115529719	115532630	protein_coding	Mknk1	exon	ENSMUSG00000028708	ProperStrand	4	chr7	28112458	28112663	protein_coding	Ltbp4	exon	ENSMUSG00000040488	ProperStrand	91	1	-18.0090
chr11	100414998	100415014	protein_coding	Ttc25	exon	ENSMUSG00000006784	NonProperStrand	119	chr14	33005065	33005139	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-2.7479
chr3	152976537	152976554	protein_coding	St6galnac3	intron	ENSMUSG00000052544	NonProperStrand	11	chr17	35089182	35089232	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-8.9052
chr2	90235300	90235338	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr15	38730346	38730364	lincRNA	Gm17265	intron	ENSMUSG00000091397	NonProperStrand	1	1	-inf
chr3	66100724	66100740	protein_coding	Veph1	utr5	ENSMUSG00000027831	NonProperStrand	92	chr6	125136422	125136465	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	1	-5.6014
chr5	108332800	108332819	protein_coding	Rpl5	exon	ENSMUSG00000058558	ProperStrand	235	chr15	98350146	98350215	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-2.2782
chr15	37874810	37874828	protein_coding	Rrm2b	exon	ENSMUSG00000022292	ProperStrand	1	chr7	117190014	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-inf
chr1	152270735	152270753	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	chr17	13115676	13115776	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	1	-3.2926
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr3	88497908	88497982	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-3.6471
chr4	132530099	132530116	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	chr3	36852886	36855658	protein_coding	4932438A13Rik	exon	ENSMUSG00000037270	ProperStrand	96	3	-18.8328
chr7	13516145	13516215	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr19	8963026	8963182	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	8	-2.2271
chr6	131330290	131330380	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	ProperStrand	408	chr7	150717348	150717428	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-2.0094
chrX	91783048	91783081	protein_coding	Maged1	exon	ENSMUSG00000025151	ProperStrand	43	chr2	26493382	26493482	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-4.3715
chr4	24555748	24555765	protein_coding	Klhl32	intron	ENSMUSG00000040387	ProperStrand	67	chr2	91436261	91436336	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	5	-19.5054
chr3	96654255	96654271	protein_coding	Pdzk1	exon	ENSMUSG00000038298	ProperStrand	101	chr19	8963049	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.4591
chr19	7044286	7044304	Low_complexity	GC_rich	Low_complexity	chr19GC_rich7044286	NonProperStrand	1	chr9	120038030	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	NonProperStrand	19	1	-inf
chr2	155677012	155677092	protein_coding-noncoding	Uqcc	utr3	ENSMUSG00000005882	NonProperStrand	1	chr2	155677437	155677527	protein_coding	Uqcc	intron	ENSMUSG00000005882	NonProperStrand	2	1	-inf
chr7	16505829	16505856	protein_coding	Sepw1	intron	ENSMUSG00000041571	ProperStrand	9	chr11	51551334	51551424	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	3	-19.7869
chr5	140902979	140903017	protein_coding	Eif3b	exon	ENSMUSG00000056076	ProperStrand	66	chr15	101923607	101924135	protein_coding	Eif4b	exon	ENSMUSG00000058655	ProperStrand	484	2	-14.1827
chr4	43505656	43505723	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr3	98118211	98118311	protein_coding	Phgdh	exon	ENSMUSG00000053398	ProperStrand	46	1	-3.5548
chr3	85942756	85942776	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	chr12	92811938	92812014	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	2	-8.2795
chr8	125626574	125626623	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	chr1	71341491	71341508	protein_coding	Abca12	exon	ENSMUSG00000050296	NonProperStrand	143	1	-8.8699
chr3	153933541	153933557	protein_coding	Slc44a5	utr3	ENSMUSG00000028360	NonProperStrand	33	chr16	23111374	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-3.9154
chr1	95217359	95217402	protein_coding	Pask	exon	ENSMUSG00000026274	ProperStrand	20	chr1	42755254	42755270	protein_coding	Pou3f3	exon	ENSMUSG00000045515	NonProperStrand	117	1	-14.1976
chr2	24534450	24534540	protein_coding	Cacna1b	exon	ENSMUSG00000004113	ProperStrand	83	chr8	73419657	73419737	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	9	-inf
chr17	80599561	80599662	protein_coding	Srsf7	utr3	ENSMUSG00000024097	ProperStrand	31	chr7	52381722	52381759	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	3	-18.7021
chr4	116250831	116250882	protein_coding	Gpbp1l1	intron	ENSMUSG00000034042	ProperStrand	12	chr5	121655017	121655107	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-6.9120
chr18	3429223	3434103	protein_coding	Cul2	intron	ENSMUSG00000024231	ProperStrand	16	chr4	131865865	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	8	-inf
chr3	85942748	85942780	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	NonProperStrand	1	chr7	118219574	118219662	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	NonProperStrand	8	1	-inf
chr3	88224967	88224984	protein_coding	Slc25a44	exon	ENSMUSG00000050144	ProperStrand	6	chr15	34370545	34370665	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-8.1636
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	NonProperStrand	14	chr10	23505152	23505283	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	NonProperStrand	45	1	-16.9247
chr2	130109497	130109513	protein_coding	Idh3b	exon	ENSMUSG00000027406	ProperStrand	146	chr4	116827120	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-5.2924
chr7	71582359	71582375	LTR	RMER6B	ERVK	chr7RMER6B71582045	ProperStrand	13	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-13.5464
chr7	112629988	112630005	protein_coding	Prkcdbp	intron	ENSMUSG00000037060	NonProperStrand	43	chr4	21606097	21606114	protein_coding	Prdm13	exon	ENSMUSG00000040478	ProperStrand	51	2	-inf
chr9	61222257	61222357	protein_coding	Tle3	utr5	ENSMUSG00000032280	ProperStrand	88	chr10	23506278	23506299	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-6.1899
chr17	47881226	47881306	protein_coding	Tfeb	intron	ENSMUSG00000023990	ProperStrand	78	chr8	32260335	32260425	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	10	-19.8034
chr10	21061566	21061656	protein_coding	Hbs1l	exon	ENSMUSG00000019977	ProperStrand	27	chr17	35299561	35299641	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-6.3454
chr3	94869356	94869419	protein_coding	Pip5k1a	exon	ENSMUSG00000028126	ProperStrand	47	chr10	23506278	23506327	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	3	-16.7211
chr17	27771160	27771304	protein_coding	Rps10	exon	ENSMUSG00000052146	ProperStrand	94	chr17	24857724	24857798	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-2.9479
chr16	14192190	14192280	protein_coding	Nde1	utr3	ENSMUSG00000022678	ProperStrand	23	chr16	23110887	23110967	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.4133
chr19	24552582	24552600	protein_coding	Pip5k1b	intron	ENSMUSG00000024867	NonProperStrand	40	chr12	110874223	110874290	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	1	-10.7950
chr15	79256065	79256086	protein_coding	Csnk1e	exon	ENSMUSG00000022433	ProperStrand	59	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-9.0129
chr11	35067383	35067400	protein_coding	Slit3	intron	ENSMUSG00000056427	ProperStrand	61	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.2462
chr1	89047942	89047961	protein_coding	Ecel1	intron	ENSMUSG00000026247	ProperStrand	4	chr5	130300419	130300477	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-7.9077
chr9	118483279	118483303	protein_coding	Golga4	intron	ENSMUSG00000038708	ProperStrand	95	chr10	110918599	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-2.6284
chr11	101833237	101833253	protein_coding	Dusp3	utr3	ENSMUSG00000003518	NonProperStrand	8	chr11	116535923	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	1	-10.0133
chr8	3516535	3516552	protein_coding	Pnpla6	utr5	ENSMUSG00000004565	ProperStrand	60	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-8.5930
chr11	84323848	84323873	protein_coding	Aatf	exon	ENSMUSG00000018697	ProperStrand	10	chr18	10029944	10029960	protein_coding	Usp14	utr5	ENSMUSG00000047879	NonProperStrand	4	1	-19.9092
chr4	138874138	138874228	protein_coding	Akr7a5	utr3	ENSMUSG00000028743	ProperStrand	22	chr2	158184129	158184209	snoRNA	ENSMUSG00000064995_SNORA71	.	ENSMUSG00000064995	ProperStrand	430	2	-17.8191
chrX	155802883	155802955	protein_coding	Rps6ka3	utr3	ENSMUSG00000031309	ProperStrand	17	chr1	88252837	88252879	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	8	-20.1307
chr11	68886928	68887008	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	chr2	144091716	144091829	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	ProperStrand	549	2	-1.3659
chr1	84754386	84754423	protein_coding	Trip12	exon	ENSMUSG00000026219	ProperStrand	248	chr19	30646119	30646135	protein_coding	Prkg1	exon	ENSMUSG00000052920	ProperStrand	32	1	-11.7374
chr6	128384362	128384470	protein_coding	Fkbp4	exon	ENSMUSG00000030357	ProperStrand	114	chr9	64023699	64023746	snoRNA	ENSMUSG00000064918_SNORD18	.	ENSMUSG00000064918	ProperStrand	370	5	-19.8701
chr8	83505490	83505766	protein_coding	Usp38	utr3	ENSMUSG00000038250	ProperStrand	26	chr1	162965531	162967519	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-8.0649
chr9	78326969	78327164	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr4	141175332	141175351	protein_coding	Slc25a34	utr3	ENSMUSG00000040740	ProperStrand	15	1	-9.1285
chr4	53873602	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	chr5	147646749	147646849	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	1	-3.8109
chr4	44150426	44150526	protein_coding	Rnf38	exon	ENSMUSG00000035696	ProperStrand	66	chr4	131865495	131865859	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-3.8235
chr5	122820581	122821906	protein_coding	1500011H22Rik	exon	ENSMUSG00000029463	ProperStrand	24	chr19	8963027	8963127	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.9221
chr18	10052132	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chrX	34667269	34667285	protein_coding	Nkap	exon	ENSMUSG00000016409	NonProperStrand	133	2	-11.5767
chr11	32500864	32503675	protein_coding	Stk10	exon	ENSMUSG00000020272	NonProperStrand	73	chr1	88248582	88248613	snoRNA	ENSMUSG00000064696_SNORD20	.	ENSMUSG00000064696	ProperStrand	89	1	-12.1275
chr19	6359193	6359211	antisense	Gm14966	.	ENSMUSG00000079467	ProperStrand	3	chr16	23110963	23111010	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr9	21295724	21295814	protein_coding-noncoding	Dnm2	utr5	ENSMUSG00000033335	ProperStrand	1	chr9	21295547	21295627	protein_coding	Dnm2	intron	ENSMUSG00000033335	ProperStrand	48	1	-inf
chr7	136800631	136800649	SINE	RSINE1	B4	chr7RSINE1136800606	ProperStrand	216	chr8	87574106	87574175	snoRNA	ENSMUSG00000077527_SNORD41	.	ENSMUSG00000077527	ProperStrand	29	2	-19.7338
chr2	84441658	84441758	protein_coding	Ctnnd1	utr3	ENSMUSG00000034101	ProperStrand	26	chr4	131865938	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.1929
chr11	99885311	99885327	protein_coding	Krt33b	exon	ENSMUSG00000057723	NonProperStrand	352	chr16	23111372	23111480	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	9	-2.3552
chr2	146125209	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	chr17	35088957	35089021	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	8	-inf
chr2	26493475	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr17	32446771	32446788	protein_coding	Akap8	intron	ENSMUSG00000024045	NonProperStrand	1	1	-inf
chr18	35413391	35413481	protein_coding	Ctnna1	exon	ENSMUSG00000037815	ProperStrand	115	chr8	73419704	73419784	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.0157
chr16	16983718	16983802	protein_coding	Mapk1	utr5	ENSMUSG00000063358	ProperStrand	67	chr1	162965555	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.0769
chr13	106426578	106426596	LINE	Lx9	L1	chr13Lx9106426520	NonProperStrand	1	chr7	52382752	52382827	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-inf
chr17	39985398	39985488	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr2	158184125	158184205	snoRNA	ENSMUSG00000064995_SNORA71	.	ENSMUSG00000064995	ProperStrand	430	1	-2.2801
chr8	34721281	34721315	protein_coding	Ppp2cb	exon	ENSMUSG00000009630	ProperStrand	14	chr10	75677626	75677643	protein_coding	Prmt2	intron	ENSMUSG00000020230	ProperStrand	3	1	-inf
chr7	36423930	36424004	protein_coding	Ankrd27	utr3	ENSMUSG00000034867	ProperStrand	132	chr11	116938712	116938752	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-4.6262
chr17	34165872	34165972	protein_coding	Slc39a7	exon	ENSMUSG00000024327	ProperStrand	39	chr10	23506278	23506318	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-7.8077
chr9	59522727	59522756	protein_coding	Pkm2	intron	ENSMUSG00000032294	ProperStrand	1296	chr8	98237522	98237622	protein_coding	Ndrg4	utr3	ENSMUSG00000036564	ProperStrand	22	1	-9.1980
chr9	102812980	102813060	SINE	B3	B2	chr9B3102812872	NonProperStrand	1	chr12	3765937	3766027	protein_coding	Dtnb	intron	ENSMUSG00000071454	ProperStrand	11	1	-inf
chr2	32818881	32818942	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	chr12	110887860	110887894	snoRNA	ENSMUSG00000084549_SNORD113	.	ENSMUSG00000084549	ProperStrand	196	4	-10.9232
chr18	35102889	35105603	protein_coding	Hspa9	exon	ENSMUSG00000024359	ProperStrand	166	chr1	39605591	39605632	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-5.3407
chr17	69370665	69370755	LINE	L1Md_F3	L1	chr17L1Md_F369370564	NonProperStrand	1	chr17	69371009	69371089	LINE	L1Md_F3	L1	chr17L1Md_F369370931	NonProperStrand	1	1	-inf
chr11	4978584	4982413	protein_coding	Ewsr1	exon	ENSMUSG00000009079	ProperStrand	248	chr7	150717298	150717422	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	3	-7.3032
chr4	149994331	149994381	protein_coding	Rere	utr3	ENSMUSG00000039852	ProperStrand	76	chr2	26494761	26494842	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.6885
chr5	54389949	54389966	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	chr15	57636208	57636231	protein_coding	Zhx2	intron	ENSMUSG00000071757	ProperStrand	20	1	-13.0093
chr12	10506526	10506542	LTR	RLTR10-int	ERVK	chr12RLTR10-int10506233	NonProperStrand	13	chr11	103721054	103721093	protein_coding	Nsf	intron	ENSMUSG00000034187	ProperStrand	20	1	-18.7925
chr15	76428089	76428132	protein_coding	Cpsf1	exon	ENSMUSG00000034022	ProperStrand	127	chr10	23505156	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-0.9238
chr7	149078001	149078066	protein_coding	Tollip	exon	ENSMUSG00000025139	ProperStrand	19	chr17	24857801	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	4	-14.3323
chr4	86503057	86503127	protein_coding-noncoding	Rps6	utr3	ENSMUSG00000028495	ProperStrand	4	chr2	130102069	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-10.9807
chr19	17620689	17620705	protein_coding	Pcsk5	intron	ENSMUSG00000024713	ProperStrand	7	chr7	108440949	108440967	protein_coding	Atg16l2	intron	ENSMUSG00000047767	ProperStrand	121	1	-16.2999
chr5	104283007	104283024	protein_coding	Aff1	utr3	ENSMUSG00000029313	ProperStrand	82	chr1	138072768	138072784	protein_coding	Kif21b	utr3	ENSMUSG00000041642	ProperStrand	77	1	-12.1844
chr18	33448995	33449075	LINE	L1M4c	L1	chr18L1M4c33449001	ProperStrand	1	chr18	33448849	33448939	LINE	Lx7	L1	chr18Lx733447516	ProperStrand	1	1	-inf
chr19	6251843	6252454	protein_coding	Atg2a	exon	ENSMUSG00000024773	ProperStrand	97	chr16	23110543	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.6840
chr14	20636346	20639172	protein_coding	2700060E02Rik	exon	ENSMUSG00000021807	ProperStrand	43	chr17	23954233	23954298	protein_coding	Srrm2	utr3	ENSMUSG00000039218	ProperStrand	521	4	-inf
chr4	131865856	131865956	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr3	96528187	96528261	snoRNA	ENSMUSG00000065669_SNORA5	.	ENSMUSG00000065669	ProperStrand	180	2	-0.9511
chr3	153575112	153575168	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	chr15	5068440	5068478	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-1.6912
chr13	70743635	70743725	protein_coding	BC018507	exon	ENSMUSG00000034525	ProperStrand	43	chr2	158185576	158185652	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-7.1483
chr11	104197639	104197870	protein_coding	1700081L11Rik	exon	ENSMUSG00000018412	ProperStrand	73	chr7	29136600	29136626	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.0406
chr17	95160908	95218242	protein_coding	2610044O15Rik	exon	ENSMUSG00000066057	NonProperStrand	70	chr11	98878344	98878389	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	2	-9.7274
chr16	20500339	20500368	protein_coding	Eif2b5	exon	ENSMUSG00000003235	ProperStrand	38	chr4	116826518	116826536	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	1	-11.2798
chr9	95567432	95567448	protein_coding	Pcolce2	intron	ENSMUSG00000015354	NonProperStrand	9	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-7.0004
chr2	167836657	167836684	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	chr16	72800514	72800532	protein_coding	Robo1	intron	ENSMUSG00000022883	NonProperStrand	188	1	-9.8423
chr17	51059907	51059923	protein_coding	Tbc1d5	exon	ENSMUSG00000023923	NonProperStrand	51	chr19	8963032	8963048	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-10.4828
chr5	31153534	31153555	protein_coding	Mapre3	intron	ENSMUSG00000029166	ProperStrand	8	chr14	76245445	76245494	protein_coding	Tpt1	exon	ENSMUSG00000060126	ProperStrand	236	1	-14.6923
chr1	136499177	136528648	protein_coding	Kdm5b	utr3	ENSMUSG00000042207	ProperStrand	223	chr7	116664819	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-1.4000
chr1	55233800	55233880	protein_coding	Rftn2	intron	ENSMUSG00000025978	ProperStrand	4	chr16	93979276	93979366	protein_coding	Cldn14	intron	ENSMUSG00000047109	ProperStrand	10	1	-19.3291
chr2	25438562	25438652	protein_coding	B230208H17Rik	utr3	ENSMUSG00000015087	ProperStrand	25	chr12	112779147	112779224	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-6.4981
chr2	33010855	33013377	protein_coding	Ralgps1	exon	ENSMUSG00000038831	ProperStrand	75	chr7	116664823	116664903	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-5.8937
chr17	35822057	35822257	protein_coding	Ddr1	exon	ENSMUSG00000003534	NonProperStrand	5	chr2	26315403	26315497	protein_coding	Notch1	exon	ENSMUSG00000026923	NonProperStrand	8	2	-18.8127
chr11	100581379	100581396	protein_coding	Rab5c	utr5	ENSMUSG00000019173	ProperStrand	76	chr1	89673715	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-2.8402
chr10	127521126	127521448	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr9	15119996	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-2.8243
chr17	8171636	8172049	protein_coding	Rsph3a	exon	ENSMUSG00000073471	ProperStrand	1	chr19	8799857	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-inf
chr14	119097491	119097538	protein_coding	Abcc4	intron	ENSMUSG00000032849	ProperStrand	137	chr7	148634801	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-2.4981
chr7	106330994	106331011	protein_coding	Dgat2	exon	ENSMUSG00000030747	NonProperStrand	2	chr1	172612010	172612026	protein_coding	Olfml2b	exon	ENSMUSG00000038463	ProperStrand	57	1	-20.8877
chr4	116230385	116230401	protein_coding	Gpbp1l1	utr5	ENSMUSG00000034042	NonProperStrand	106	chr19	8799829	8799899	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-3.8644
chr19	8895028	8895090	protein_coding	Hnrnpul2	exon	ENSMUSG00000071659	ProperStrand	93	chr6	71832594	71832645	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	2	-7.8756
chr19	5100472	5100516	protein_coding	Rab1b	exon	ENSMUSG00000024870	ProperStrand	133	chr1	63225629	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-5.1084
chr11	114548179	114548197	protein_coding	Ttyh2	intron	ENSMUSG00000034714	ProperStrand	23	chr4	131908300	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.9964
chr19	4295396	4295419	protein_coding	Adrbk1	intron	ENSMUSG00000024858	ProperStrand	37	chr18	35716762	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-7.7225
chr12	17552949	17553091	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr2	144087334	144087462	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	9	-5.8018
chr11	77995190	77995238	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	chr6	124665415	124665515	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	1	-0.7312
chr13	46862882	46862943	snoRNA	ENSMUSG00000064558_SNORA55	.	ENSMUSG00000064558	ProperStrand	187	chr4	131866629	131866669	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	2	-11.0135
chr15	100361380	100361478	protein_coding	Tfcp2	intron	ENSMUSG00000009733	ProperStrand	6	chr18	35714245	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-8.0481
chr17	5647517	5647535	protein_coding	Zdhhc14	intron	ENSMUSG00000034265	ProperStrand	10	chr11	106362638	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-11.0566
chr11	67167096	67167112	protein_coding	Myh13	exon	ENSMUSG00000060180	ProperStrand	145	chr7	52378425	52378481	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	1	-6.7488
chr2	9985901	9985917	protein_coding	Atp5c1	exon	ENSMUSG00000025781	ProperStrand	138	chr1	90598741	90598757	protein_coding	Arl4c	utr5	ENSMUSG00000049866	ProperStrand	25	1	-13.4141
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr5	130101556	130102445	protein_coding	Mmp17	exon	ENSMUSG00000029436	NonProperStrand	15	1	-11.5316
chr11	109489519	109489535	lincRNA	Gm11685	intron	ENSMUSG00000086733	NonProperStrand	5	chr5	3693225	3693241	protein_coding	Ankib1	exon	ENSMUSG00000040351	NonProperStrand	98	1	-17.3748
chr5	135097872	135101273	protein_coding	Eif4h	exon	ENSMUSG00000040731	ProperStrand	46	chr7	117190025	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.8238
chr1	162968441	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	chr4	56910498	56910588	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	4	-2.1001
chr6	38244725	38244742	protein_coding	Zc3hav1l	intron	ENSMUSG00000047749	ProperStrand	3	chr15	79910157	79910207	protein_coding	Rpl3	exon	ENSMUSG00000060036	ProperStrand	8342	1	-9.8112
chr4	86500726	86500755	protein_coding	Rps6	exon	ENSMUSG00000028495	ProperStrand	263	chr1	24621129	24621167	protein_coding	Gm10925	utr3	ENSMUSG00000090378	ProperStrand	320	1	-7.0124
chr12	30684759	30684775	protein_coding	Pxdn	exon	ENSMUSG00000020674	NonProperStrand	16	chr7	71083322	71083338	protein_coding	Klf13	exon	ENSMUSG00000052040	NonProperStrand	4	1	-inf
chr7	104776183	104776201	protein_coding	Rsf1	intron	ENSMUSG00000035623	ProperStrand	48	chr19	8799581	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	2	-11.5907
chr10	41239410	41239486	protein_coding	Cd164	exon	ENSMUSG00000019818	ProperStrand	38	chr6	38384214	38384231	protein_coding	Ubn2	exon	ENSMUSG00000038538	ProperStrand	86	1	-13.5134
chr17	6952007	6952097	protein_coding	Ezr	intron	ENSMUSG00000052397	NonProperStrand	1	chr11	78644515	78644605	protein_coding	1810012P15Rik	intron	ENSMUSG00000072640	NonProperStrand	1	1	-inf
chr7	133938934	133939132	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	chr14	76372292	76372332	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	1	-4.1189
chr9	120866741	120866932	protein_coding	Ctnnb1	exon	ENSMUSG00000006932	ProperStrand	214	chr4	116827121	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-4.5575
chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr13	56353448	56353465	protein_coding	Neurog1	utr5	ENSMUSG00000048904	ProperStrand	105	1	-5.3564
chr3	54601731	54601821	protein_coding	Smad9	utr3	ENSMUSG00000027796	NonProperStrand	15	chr3	55143334	55143414	protein_coding	Dclk1	intron	ENSMUSG00000027797	ProperStrand	6	1	-19.9831
chr17	47906327	47906348	protein_coding	Tfeb	utr5	ENSMUSG00000023990	ProperStrand	78	chr4	149026816	149026832	protein_coding	Pik3cd	exon	ENSMUSG00000039936	ProperStrand	151	1	-10.9334
chr1	107743301	107743317	protein_coding	Tnfrsf11a	utr3	ENSMUSG00000026321	NonProperStrand	100	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-7.0690
chr7	13516127	13516219	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr11	106362336	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	10	-18.8113
chr17	39985146	39985765	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr11	97642952	97643090	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	22	-1.3716
chr5	23947523	23947603	protein_coding-noncoding	Fastk	utr3	ENSMUSG00000028959	ProperStrand	3	chr5	23676004	23676094	protein_coding	Nupl2	intron	ENSMUSG00000048439	NonProperStrand	1	1	-inf
chr9	110291639	110291794	protein_coding	Ptpn23	exon	ENSMUSG00000036057	ProperStrand	34	chr18	35714147	35714237	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.5127
chr8	13189650	13189666	protein_coding	Grtp1	exon	ENSMUSG00000038515	NonProperStrand	12	chr15	34370545	34370673	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-6.6995
chr15	10499280	10499370	protein_coding	Rai14	utr3	ENSMUSG00000022246	ProperStrand	180	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-6.4105
chr4	137368398	137368419	SINE	RSINE1	B4	chr4RSINE1137368381	NonProperStrand	1	chr17	24856620	24856681	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-inf
chr1	162967129	162967178	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	chr13	96100594	96100694	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	1	-3.5742
chr18	14911194	14911212	protein_coding	Psma8	intron	ENSMUSG00000036743	NonProperStrand	2	chr10	23505152	23505202	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-8.0476
chr14	55268805	55268850	protein_coding-noncoding	Acin1	utr3	ENSMUSG00000022185	ProperStrand	15	chr4	131908689	131908794	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-15.7254
chr2	32086685	32086728	protein_coding	Prrc2b	utr3	ENSMUSG00000039262	ProperStrand	344	chrX	11635848	11635865	protein_coding	Bcor	exon	ENSMUSG00000040363	NonProperStrand	293	1	-6.6567
chr3	85944541	85944588	snoRNA	ENSMUSG00000064390_Rnu73b	.	ENSMUSG00000064390	ProperStrand	164	chr2	26494766	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	4	-6.0147
chr14	84189469	84189559	LTR	LTRIS4	ERV1	chr14LTRIS484189481	NonProperStrand	1	chr14	84189340	84189420	LTR	ORR1A2	MaLR	chr14ORR1A284189129	NonProperStrand	1	1	-inf
chr2	90235314	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	136741530	136741546	protein_coding	Cux1	intron	ENSMUSG00000029705	ProperStrand	19	1	-6.7268
chr3	130957305	130957322	protein_coding	Hadh	intron	ENSMUSG00000027984	NonProperStrand	13	chr3	95980283	95980305	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-9.9551
chr7	148508056	148508105	protein_coding	Deaf1	intron	ENSMUSG00000058886	ProperStrand	23	chr16	23111452	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.7951
chr7	108971290	108971306	protein_coding	Inppl1	utr3	ENSMUSG00000032737	ProperStrand	272	chr2	26768049	26768097	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	1	-5.4081
chr1	138822891	138822941	protein_coding	Nr5a2	intron	ENSMUSG00000026398	ProperStrand	43	chr16	23110510	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.0458
chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	chr18	75160711	75160777	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	1	-6.5152
chr11	69779474	69779547	protein_coding	Cldn7	exon	ENSMUSG00000018569	ProperStrand	7	chr7	116664817	116664907	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-11.0704
chr12	103159814	103159830	protein_coding	Atxn3	utr3	ENSMUSG00000021189	NonProperStrand	4	chr11	77996560	77996623	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-11.7355
chr17	17914970	17915060	LINE	L1_Mus1	L1	chr17L1_Mus117914552	ProperStrand	1	chr17	17912577	17912667	LTR	ORR1A2-int	MaLR	chr17ORR1A2-int17911606	NonProperStrand	1	1	-inf
chr5	14977911	14977927	protein_coding	Gm10354	intron	ENSMUSG00000072188	ProperStrand	16	chr11	98878344	98878375	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-8.9452
chr4	131908358	131908475	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr7	148634702	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	7	-2.6433
chr8	26933754	26945522	protein_coding	Ash2l	exon	ENSMUSG00000031575	ProperStrand	113	chr4	131908688	131908805	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-1.9129
chr1	74443162	74443178	protein_coding	Ctdsp1	utr3	ENSMUSG00000026176	NonProperStrand	3	chr9	21572473	21572513	protein_coding	Kank2	utr3	ENSMUSG00000032194	ProperStrand	196	1	-17.5987
chr1	138523466	138523574	protein_coding	Zfp281	exon	ENSMUSG00000041483	ProperStrand	18	chr1	162967530	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-5.7965
chr2	119199594	119199694	protein_coding	Ino80	utr3	ENSMUSG00000034154	ProperStrand	54	chr7	118219574	118219636	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	4	-13.9834
chr9	57299285	57299811	protein_coding	Scamp5	utr5	ENSMUSG00000040722	ProperStrand	12	chr11	6428035	6428119	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-10.3430
chr14	56448786	56448866	protein_coding	Nfatc4	exon	ENSMUSG00000023411	ProperStrand	16	chr10	23505157	23505247	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-5.9181
chr5	147644721	147644743	protein_coding	Rpl21	utr5	ENSMUSG00000041453	ProperStrand	112	chr19	8963027	8963085	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-2.5018
chr13	16280346	16280368	LTR	RMER19B	ERVK	chr13RMER19B16280043	NonProperStrand	1	chr4	131865867	131865922	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr6	29833703	29833729	protein_coding	Ahcyl2	exon	ENSMUSG00000029772	ProperStrand	10	chr3	123210854	123210933	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.4047
chr10	23505159	23505219	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	chr13	22063696	22063729	tRNA	tRNA89-LysTTT	.	1065852	ProperStrand	10	2	-7.3782
chr16	3856858	3856877	protein_coding	Zfp174	utr3	ENSMUSG00000054939	NonProperStrand	166	chr17	26360446	26360536	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	6	-inf
chr6	5109603	5109693	protein_coding	Ppp1r9a	exon	ENSMUSG00000032827	ProperStrand	50	chr5	74489556	74489636	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-4.1207
chr12	17552949	17553091	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr3	123210854	123210987	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	39	-0.8147
chr5	108863077	108863351	protein_coding	Atp5k	exon	ENSMUSG00000050856	ProperStrand	1	chr5	98614481	98614533	pseudogene	A730035I17Rik	.	ENSMUSG00000045238	ProperStrand	17	1	-inf
chr13	9833572	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr17	88382879	88383799	protein_coding	Msh6	exon	ENSMUSG00000005370	ProperStrand	150	1	-3.2342
chr15	58884095	58884113	protein_coding	Mtss1	intron	ENSMUSG00000022353	NonProperStrand	51	chr7	16557161	16557184	protein_coding	Gltscr1	exon	ENSMUSG00000070808	ProperStrand	17	1	-16.2408
chr1	75484537	75484553	protein_coding	Obsl1	exon	ENSMUSG00000026211	NonProperStrand	192	chr3	68889170	68889241	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-1.3474
chr18	34165432	34165449	protein_coding	Epb4.1l4a	intron	ENSMUSG00000024376	NonProperStrand	6	chr15	79913292	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-8.2103
chr13	9833560	9833675	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr2	80370441	80373804	protein_coding	Nckap1	exon	ENSMUSG00000027002	ProperStrand	21	1	-7.0324
chr18	82773672	82773688	protein_coding	Zfp236	exon	ENSMUSG00000041258	NonProperStrand	117	chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-6.4146
chr9	40610442	40610532	protein_coding-noncoding	Hspa8	utr5	ENSMUSG00000015656	ProperStrand	7	chr17	24857719	24857799	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-6.4221
chr6	37820900	37820986	protein_coding	Trim24	utr5	ENSMUSG00000029833	ProperStrand	27	chr16	23111389	23111479	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.5132
chr18	38746850	38746950	protein_coding	Spry4	utr3	ENSMUSG00000024427	ProperStrand	24	chr11	62418040	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-7.3792
chr6	54379743	54379760	lincRNA	9130019P16Rik	exon	ENSMUSG00000073067	ProperStrand	255	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-3.1267
chr9	59526809	59526845	protein_coding	Pkm2	utr3	ENSMUSG00000032294	ProperStrand	1296	chr14	31827517	31827545	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-1.3728
chr5	66029855	66029871	protein_coding	Pds5a	exon	ENSMUSG00000029202	ProperStrand	62	chr14	55476645	55476661	protein_coding	Homez	exon	ENSMUSG00000057156	NonProperStrand	127	1	-11.7423
chr8	63458443	63458533	protein_coding	Clcn3	intron	ENSMUSG00000004319	ProperStrand	93	chr8	86096597	86096764	protein_coding	Tecr	exon	ENSMUSG00000031708	ProperStrand	100	1	-11.4062
chr17	35822057	35822257	protein_coding	Ddr1	exon	ENSMUSG00000003534	ProperStrand	129	chr5	35002640	35002657	protein_coding	Nop14	exon	ENSMUSG00000036693	NonProperStrand	5	1	-16.8975
chr5	134341420	134341510	LTR	MLT1C	MaLR	chr5MLT1C134341390	NonProperStrand	1	chr5	134341603	134341683	LTR	ORR1E	MaLR	chr5ORR1E134341513	ProperStrand	1	1	-inf
chr6	34254140	34254208	protein_coding	Akr1b3	utr3	ENSMUSG00000001642	ProperStrand	71	chr7	29136573	29136634	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-5.7063
chr18	67588695	67588713	protein_coding	Afg3l2	exon	ENSMUSG00000024527	ProperStrand	43	chr5	23100257	23100276	protein_coding	Srpk2	intron	ENSMUSG00000062604	NonProperStrand	38	1	-14.9186
chr18	35714263	35714292	lincRNA	Snhg4	intron	ENSMUSG00000090430	ProperStrand	270	chr7	52225785	52225851	protein_coding	Cpt1c	exon	ENSMUSG00000007783	ProperStrand	94	1	-9.3974
chr5	117733249	117733339	protein_coding	Pebp1	utr3	ENSMUSG00000032959	ProperStrand	54	chr9	15119282	15119364	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-5.3137
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr11	68886928	68887066	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	6	-2.1956
chr12	8912742	8912832	SINE	B4A	B4	chr12B4A8912731	NonProperStrand	1	chr9	116928966	116929046	protein_coding	Rbms3	intron	ENSMUSG00000039607	ProperStrand	12	1	-inf
chr11	86457037	86457127	protein_coding	Vmp1	exon	ENSMUSG00000018171	ProperStrand	6	chr10	23505191	23505271	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-9.1162
chr9	21934462	21934478	protein_coding	Acp5	exon	ENSMUSG00000001348	ProperStrand	66	chr15	79908963	79909019	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-5.2867
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr14	35151984	35153116	protein_coding	Glud1	exon	ENSMUSG00000021794	ProperStrand	72	1	-7.9514
chr2	90845014	90856527	protein_coding	Celf1	exon	ENSMUSG00000005506	ProperStrand	61	chr16	23110470	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	5	-11.4475
chr8	75177456	75180961	protein_coding	Nwd1	exon	ENSMUSG00000048148	ProperStrand	46	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.1947
chr3	123210913	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	chr13	21998976	21998993	tRNA	tRNA82-MetCAT	.	37759	ProperStrand	44	2	-4.5573
chr18	73693113	73693137	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr2	26768049	26768119	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	1	-1.2178
chr15	78916065	78920129	protein_coding	Eif3l	exon	ENSMUSG00000033047	ProperStrand	81	chr19	8963027	8963163	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-3.2830
chr11	116535933	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr6	71832550	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	3	-0.6998
chr13	6591480	6591557	protein_coding	Pfkp	intron	ENSMUSG00000021196	ProperStrand	197	chr11	116938636	116938726	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	10	-23.5562
chr17	37609582	37609662	LINE	L1Md_F	L1	chr17L1Md_F37609600	NonProperStrand	1	chr17	37609409	37609499	LINE	L1Md_T	L1	chr17L1Md_T37609079	NonProperStrand	1	1	-inf
chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	chr4	122968662	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-1.2889
chr2	90235315	90235346	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	85276549	85276566	LTR	IAP-d-int	ERVK	chr8IAP-d-int85276155	ProperStrand	26	2	-9.9405
chr9	114299493	114299522	protein_coding	Crtap	exon	ENSMUSG00000032431	ProperStrand	15	chr7	13592497	13592585	protein_coding	Zbtb45	exon	ENSMUSG00000049600	ProperStrand	16	3	-inf
chr19	47641479	47641497	LINE	L1ME1	L1	chr19L1ME147641283	ProperStrand	2	chr4	59102793	59102852	protein_coding	AI481877	intron	ENSMUSG00000038598	ProperStrand	2	1	-inf
chr1	149637759	149637849	LINE	L1_Mus1	L1	chr1L1_Mus1149636280	ProperStrand	1	chr7	150407428	150407508	protein_coding	Kcnq1	intron	ENSMUSG00000009545	NonProperStrand	133	1	-inf
mmu-miR-2137	0	20	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	chr2	48760556	48760572	protein_coding	Orc4	utr3	ENSMUSG00000026761	ProperStrand	95	1	-10.6325
chr9	64024930	64024998	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	chr17	35299512	35299637	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	2	-2.3122
chr9	29296336	29296355	protein_coding	Ntm	intron	ENSMUSG00000059974	NonProperStrand	27	chr17	85404899	85412942	protein_coding	Ppm1b	exon	ENSMUSG00000061130	ProperStrand	36	1	-15.9541
chr10	83071834	83073738	protein_coding	Appl2	exon	ENSMUSG00000020263	ProperStrand	15	chr4	131908810	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.5353
mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr14	124243064	124243085	protein_coding	Itgbl1	exon	ENSMUSG00000032925	ProperStrand	159	1	-4.0270
chr9	120866664	120866723	protein_coding	Ctnnb1	exon	ENSMUSG00000006932	ProperStrand	214	chr1	24620929	24620958	protein_coding	Gm10925	utr3	ENSMUSG00000090378	ProperStrand	320	3	-16.6681
chr3	108357352	108357452	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	chr14	76552606	76552665	tRNA	tRNA347-GluTTC	.	1659748	ProperStrand	19	1	-6.8071
chr1	133252364	133252444	protein_coding	Srgap2	intron	ENSMUSG00000026425	ProperStrand	299	chr1	89681306	89681396	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-2.4663
chr11	107845210	107845229	protein_coding	Prkca	exon	ENSMUSG00000050965	NonProperStrand	10	chr11	6519808	6519923	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	2	-18.3658
chr8	12757419	12757437	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr18	20904838	20904855	protein_coding	B4galt6	utr5	ENSMUSG00000056124	ProperStrand	31	1	-9.9233
chr15	50493135	50493157	protein_coding	Trps1	exon	ENSMUSG00000038679	ProperStrand	14	chr16	23110983	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.2008
chr7	147164712	147164803	lincRNA	Gm16201	exon	ENSMUSG00000086742	ProperStrand	4	chr15	79913288	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-9.1208
chr15	83701440	83701587	protein_coding	Efcab6	exon	ENSMUSG00000022441	ProperStrand	60	chr8	113577188	113577840	protein_coding	Aars	exon	ENSMUSG00000031960	ProperStrand	355	1	-9.7518
chr13	63612936	63612952	protein_coding	Ptch1	exon	ENSMUSG00000021466	NonProperStrand	118	chr11	69481395	69481421	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-2.0371
chr2	68909479	68947791	protein_coding	Lass6	utr3	ENSMUSG00000027035	ProperStrand	32	chr16	23110900	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	14	-19.3253
chr8	108184199	108184261	protein_coding	Ctcf	intron	ENSMUSG00000005698	ProperStrand	75	chr14	70117248	70117314	protein_coding	R3hcc1	intron	ENSMUSG00000034194	ProperStrand	12	1	-16.1801
chr10	127521231	127521270	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	chr11	116938636	116938741	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-1.9986
chr4	147988651	147988668	protein_coding	Tardbp	utr3	ENSMUSG00000041459	ProperStrand	120	chr3	153574614	153574654	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	1	-8.2873
chr8	127413427	127413505	protein_coding	Gnpat	utr3	ENSMUSG00000031985	ProperStrand	20	chr7	148634713	148634803	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-6.1264
chr2	126942562	126942652	protein_coding	Ncaph	intron	ENSMUSG00000034906	ProperStrand	43	chr1	162966002	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-4.2288
chr10	90565199	90565215	protein_coding	Ikbip	exon	ENSMUSG00000019975	ProperStrand	12	chr16	90386834	90386852	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	1	-15.5161
chr5	23886580	23886600	protein_coding	Nos3	intron	ENSMUSG00000028978	ProperStrand	13	chr9	15118245	15118306	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-6.4467
chr4	148524844	148525023	protein_coding	Pgd	exon	ENSMUSG00000028961	ProperStrand	34	chr7	29136525	29136605	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.3698
chr4	118951574	118951605	protein_coding	Ybx1	exon	ENSMUSG00000028639	ProperStrand	171	chr3	68889098	68889198	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-1.5134
chr17	31640574	31640590	protein_coding	Wdr4	exon	ENSMUSG00000024037	NonProperStrand	18	chr11	69483136	69483229	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.6750
chr19	4197389	4197479	protein_coding	Rad9	intron	ENSMUSG00000024824	ProperStrand	14	chr15	76432160	76432204	protein_coding	Cpsf1	exon	ENSMUSG00000034022	ProperStrand	127	4	-inf
chr12	113056828	113056918	protein_coding	Zfyve21	intron	ENSMUSG00000021286	ProperStrand	16	chr3	88715213	88715230	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	8	-19.5716
chr3	142889990	142890080	SINE	B1_Mur1	Alu	chr3B1_Mur1142889976	NonProperStrand	1	chr3	142890116	142890206	SINE	B1_Mus1	Alu	chr3B1_Mus1142890140	NonProperStrand	1	1	-inf
chr13	9833555	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr1	180260761	180260811	protein_coding	Hnrnpu	exon	ENSMUSG00000039630	ProperStrand	286	1	-2.1214
chr17	29105633	29105709	protein_coding	Kctd20	utr3	ENSMUSG00000005936	ProperStrand	21	chr19	38869531	38869547	protein_coding	Noc3l	exon	ENSMUSG00000024999	NonProperStrand	149	1	-13.6169
chrX	54046219	54046306	protein_coding	Fhl1	utr3	ENSMUSG00000023092	NonProperStrand	4	chr3	123210872	123210972	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	NonProperStrand	45	1	-18.7780
chr3	144094922	144094938	protein_coding	Hs2st1	utr3	ENSMUSG00000040151	NonProperStrand	31	chr4	131865380	131865442	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-5.2733
chr15	55616825	55616842	protein_coding	Sntb1	intron	ENSMUSG00000060429	NonProperStrand	6	chr1	162968442	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-10.8078
chr2	31658689	31658706	protein_coding	Abl1	utr3	ENSMUSG00000026842	NonProperStrand	6	chr4	131865393	131865459	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-8.6503
chr2	179322377	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr11	97642997	97643087	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-0.9150
chr16	36915365	36915465	protein_coding	Golgb1	exon	ENSMUSG00000034243	ProperStrand	92	chr5	130300531	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.8086
chr4	150307026	150307116	protein_coding	Tnfrsf9	intron	ENSMUSG00000028965	ProperStrand	3	chr8	123594578	123594658	protein_coding	Gm20388	intron	ENSMUSG00000092329	ProperStrand	295	1	-16.4879
chr11	120400182	120400198	protein_coding	Gcgr	utr3	ENSMUSG00000025127	ProperStrand	5	chr16	23110911	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr14	34260387	34260409	Low_complexity	GC_rich	Low_complexity	chr14GC_rich34260387	ProperStrand	3	chr6	125231663	125232465	protein_coding	Tuba3a	exon	ENSMUSG00000067702	ProperStrand	405	1	-15.8658
chr4	116826586	116826943	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	chr4	128899900	128899916	protein_coding	C77080	exon	ENSMUSG00000050390	NonProperStrand	28	1	-11.8989
chr18	10052130	10052153	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-2.7038
chr7	139906930	139906977	protein_coding	Fam53b	utr3	ENSMUSG00000030956	ProperStrand	8	chr5	151755616	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-11.8681
chr13	106235953	106235970	protein_coding	Htr1a	utr3	ENSMUSG00000021721	ProperStrand	8	chr11	69483186	69483262	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-6.3191
chr4	132100644	132102619	protein_coding	Dnajc8	exon	ENSMUSG00000054405	ProperStrand	22	chr10	39978361	39978441	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	2	-11.9978
chr4	140124424	140126176	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	chr9	120038552	120038674	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.6738
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr5	30084342	30084358	protein_coding	Dnajb6	exon	ENSMUSG00000029131	ProperStrand	81	1	-8.1155
chr11	70792015	70792197	protein_coding	C1qbp	exon	ENSMUSG00000018446	ProperStrand	46	chr1	162965576	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.7662
chr8	110194452	110194537	DNA	URR1B	MER1_type	chr8URR1B110194311	NonProperStrand	1	chr16	23110909	23110999	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr5	115355880	115355968	protein_coding	Oasl2	intron	ENSMUSG00000029561	NonProperStrand	5	chr11	6428035	6428076	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	4	-20.0080
chr9	78023109	78023148	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr11	48615896	48615912	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	1	-2.5952
chr19	22926632	22926662	protein_coding	Trpm3	intron	ENSMUSG00000052387	ProperStrand	54	chr7	117166772	117166858	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	2	-8.2800
chr11	6519810	6519944	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	chr18	35714148	35714276	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	6	-2.1199
chr15	102539571	102539629	protein_coding	Calcoco1	exon	ENSMUSG00000023055	ProperStrand	29	chr1	162966007	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	3	-11.8482
chr9	121658350	121658371	protein_coding	Nktr	exon	ENSMUSG00000032525	ProperStrand	41	chr5	130300460	130300556	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	4	-10.9321
chr13	107688000	107688017	protein_coding	Ipo11	intron	ENSMUSG00000042590	NonProperStrand	8	chr7	91031880	91031907	protein_coding	Mesdc1	utr5	ENSMUSG00000070462	ProperStrand	19	1	-18.7527
chr7	90273393	90273483	LTR	ORR1D1	MaLR	chr7ORR1D190273410	ProperStrand	1	chr7	90273587	90273667	Simple_repeat	(CAGG)n	Simple_repeat	chr7(CAGG)n90273539	NonProperStrand	1	1	-inf
chr18	80909380	80909396	protein_coding	Nfatc1	exon	ENSMUSG00000033016	ProperStrand	35	chr17	39985193	39985216	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-7.0015
chr11	116535948	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr4	151482609	151482789	protein_coding	Plekhg5	exon	ENSMUSG00000039713	ProperStrand	33	2	-11.4351
chr4	43505781	43505871	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr9	92148864	92148913	protein_coding	Plscr1	intron	ENSMUSG00000032369	ProperStrand	3	1	-9.2362
chr7	52382373	52382431	protein_coding	Rpl13a	exon	ENSMUSG00000074129	ProperStrand	269	chr19	39917317	39917333	protein_coding	Cyp2c69	utr3	ENSMUSG00000092008	NonProperStrand	83	1	-9.6542
chr7	135849515	135849541	protein_coding	Mcmbp	intron	ENSMUSG00000048170	ProperStrand	87	chr19	8800375	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-2.8593
chr11	99248439	99248466	protein_coding	Krt10	intron	ENSMUSG00000019761	NonProperStrand	6	chr16	23110828	23110873	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-inf
chr10	127431641	127434767	protein_coding	Hsd17b6	exon	ENSMUSG00000025396	ProperStrand	12	chr9	120039533	120039567	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-6.4506
chr5	54046906	54046996	protein_coding	Rbpj	utr3	ENSMUSG00000039191	ProperStrand	96	chr11	69481379	69481459	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-2.3775
chr11	50664782	50664799	protein_coding	Grm6	exon	ENSMUSG00000000617	ProperStrand	3	chr5	121655017	121655107	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-9.9796
chr9	78023194	78023244	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr9	15119976	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-0.7373
chr7	16534823	16534839	protein_coding	Ehd2	utr3	ENSMUSG00000074364	NonProperStrand	197	chr7	29136525	29136598	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-1.4291
chr5	86801031	86801121	protein_coding	Tmprss11d	intron	ENSMUSG00000061259	ProperStrand	2	chr5	86852303	86852393	protein_coding	Tmprss11a	intron	ENSMUSG00000072845	ProperStrand	3	1	-inf
chr14	122870816	122870832	lincRNA	2610035F20Rik	exon	ENSMUSG00000085555	ProperStrand	29	chr9	50816824	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	1	-13.2809
chr14	12706225	12706244	protein_coding	Ptprg	intron	ENSMUSG00000021745	ProperStrand	72	chr11	69481383	69481473	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-2.8744
chr5	100855915	100855969	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr4	118804754	118804852	protein_coding	Slc2a1	exon	ENSMUSG00000028645	ProperStrand	361	1	-3.2075
chr8	37401782	37401800	LINE	L1MC1	L1	chr8L1MC137401479	ProperStrand	11	chr2	113972551	113972572	protein_coding	Aqr	intron	ENSMUSG00000040383	ProperStrand	70	1	-16.4723
chr1	75171117	75171354	protein_coding	Abcb6	exon	ENSMUSG00000026198	ProperStrand	9	chr3	123210889	123210969	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.6210
chr16	37887798	37887840	protein_coding	Lrrc58	utr3	ENSMUSG00000034158	ProperStrand	23	chr7	148634771	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	3	-13.6270
chr13	63197388	63197408	protein_coding	2010111I01Rik	intron	ENSMUSG00000021458	ProperStrand	32	chr10	23505153	23505278	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-3.9487
chr8	125415967	125416042	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	chr8	80041484	80041501	protein_coding	Arhgap10	intron	ENSMUSG00000037148	ProperStrand	58	2	-15.3090
chrX	92666490	92666507	protein_coding	Asb12	exon	ENSMUSG00000031204	ProperStrand	1	chr11	6428108	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-inf
chr17	24858599	24858627	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr8	85961925	85961941	protein_coding	Scoc	utr5	ENSMUSG00000063253	ProperStrand	23	1	-11.5935
chr8	23500511	23506186	protein_coding	Slc25a15	exon	ENSMUSG00000031482	ProperStrand	13	chr12	60141444	60141509	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-9.9265
chr7	109159482	109159572	protein_coding	Numa1	exon	ENSMUSG00000066306	ProperStrand	148	chr19	8800373	8800453	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-1.9643
chr7	104104491	104106590	protein_coding	Nars2	exon	ENSMUSG00000018995	ProperStrand	6	chr16	23110487	23110529	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-6.9463
chr11	96680548	96680566	protein_coding	Nfe2l1	exon	ENSMUSG00000038615	NonProperStrand	2	chr11	6428059	6428156	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-inf
chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	chr11	106362643	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-2.1528
chr5	23360054	23360154	lincRNA	2700038G22Rik	exon	ENSMUSG00000086802	ProperStrand	5	chr15	79913288	79913336	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-8.6129
chr4	11259311	11259377	protein_coding	Esrp1	utr3	ENSMUSG00000040728	ProperStrand	12	chr16	23111777	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-8.1126
chr11	70050432	70050465	protein_coding	0610010K14Rik	exon	ENSMUSG00000020831	ProperStrand	16	chr17	13112532	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	2	-11.6385
chr13	52721827	52721843	protein_coding	Syk	intron	ENSMUSG00000021457	NonProperStrand	125	chr14	56159295	56159311	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	1	-9.4665
chr1	187147581	187147625	protein_coding	Iars2	exon	ENSMUSG00000026618	ProperStrand	68	chr10	104626114	104626130	protein_coding	Tmtc2	utr3	ENSMUSG00000036019	NonProperStrand	14	1	-16.0433
chr2	70927899	70927915	protein_coding	Dcaf17	exon	ENSMUSG00000041966	NonProperStrand	89	chr18	33954842	33954932	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-4.8656
chr17	36098950	36100083	protein_coding	Abcf1	exon	ENSMUSG00000038762	ProperStrand	206	chr19	8798484	8798524	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	6	-15.8159
chr2	27089928	27091002	protein_coding	Sardh	exon	ENSMUSG00000009614	ProperStrand	6	chr4	56910545	56910614	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-10.8362
chr19	44649472	44649892	protein_coding	Hif1an	utr3	ENSMUSG00000036450	ProperStrand	16	chr7	117189918	117190057	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-9.6536
chr10	110374836	110374879	protein_coding	Csrp2	exon	ENSMUSG00000020186	ProperStrand	24	chr4	131908810	131908856	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.6746
chr16	36928735	36928761	protein_coding	Golgb1	exon	ENSMUSG00000034243	ProperStrand	92	chr7	116664834	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-3.3676
chr4	43019634	43019675	protein_coding	Fancg	exon	ENSMUSG00000028453	ProperStrand	13	chr14	65372770	65372858	snoRNA	ENSMUSG00000064442_SNORA36	.	ENSMUSG00000064442	ProperStrand	296	1	-13.2296
chr2	109516160	109516176	protein_coding	Bdnf	utr5	ENSMUSG00000048482	NonProperStrand	47	chr18	73693171	73693189	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-6.0038
chr16	33430319	33430340	protein_coding	Zfp148	intron	ENSMUSG00000022811	NonProperStrand	15	chr11	6428088	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.8593
chr4	3512948	3513009	protein_coding	Tgs1	exon	ENSMUSG00000028233	ProperStrand	10	chr2	26494773	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-6.5951
chr14	75721463	75721518	protein_coding	Zc3h13	exon	ENSMUSG00000022000	ProperStrand	42	chr10	87922432	87922448	protein_coding	Chpt1	intron	ENSMUSG00000060002	ProperStrand	15	1	-16.9220
chr4	106307112	106307128	protein_coding	Ttc22	exon	ENSMUSG00000034919	NonProperStrand	5	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-6.5022
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr19	7059960	7059977	protein_coding	Vegfb	exon	ENSMUSG00000024962	NonProperStrand	1	1	-inf
chr11	120242547	120242637	protein_coding	Nploc4	utr3	ENSMUSG00000039703	ProperStrand	44	chr7	116664794	116664874	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.0957
chr4	151368477	151368495	protein_coding	Phf13	intron	ENSMUSG00000047777	ProperStrand	38	chr16	90386835	90386853	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	1	-13.1328
chr17	29108579	29108640	protein_coding	Stk38	utr3	ENSMUSG00000024006	ProperStrand	57	chr15	98350146	98350200	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-4.8594
chr3	104272449	104272465	protein_coding	Lrig2	exon	ENSMUSG00000032913	ProperStrand	10	chr17	13112492	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-8.1682
chr19	42852645	42852686	protein_coding	Hps1	exon	ENSMUSG00000025188	ProperStrand	13	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.3283
chr11	40515953	40515986	protein_coding	Hmmr	utr3	ENSMUSG00000020330	ProperStrand	61	chr4	131865383	131865473	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-3.9711
chr5	100467584	100467642	protein_coding	Hnrpdl	intron	ENSMUSG00000029328	ProperStrand	39	chr7	29136554	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	6	-16.9320
chr5	136611800	136611816	protein_coding	Lrwd1	exon	ENSMUSG00000029703	NonProperStrand	51	chr3	123210892	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.3354
chr4	115484063	115484086	protein_coding	Atpaf1	utr3	ENSMUSG00000028710	ProperStrand	202	chr11	97642980	97643070	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-1.5009
chr8	89255113	89255150	protein_coding	Siah1a	intron	ENSMUSG00000036840	ProperStrand	6	chr11	62416971	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-10.7711
chr9	24549571	24549602	protein_coding	Tbx20	intron	ENSMUSG00000031965	NonProperStrand	110	chr16	23111740	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.0320
chr1	182165177	182165209	protein_coding	Psen2	exon	ENSMUSG00000010609	ProperStrand	13	chr7	29136575	29136634	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.2243
chrX	56026476	56026568	LTR	RLTR10-int	ERVK	chrXRLTR10-int56025143	ProperStrand	1	chr11	52584631	52584711	protein_coding	Fstl4	intron	ENSMUSG00000036264	NonProperStrand	8	1	-inf
chr19	9951239	9952189	protein_coding	Incenp	exon	ENSMUSG00000024660	ProperStrand	111	chr1	161270464	161270544	snoRNA	ENSMUSG00000089536_Scarna3a	.	ENSMUSG00000089536	ProperStrand	247	3	-20.3577
chr5	115940306	115940406	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	chr7	150717298	150717348	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	5	-7.8689
chr5	137966039	137966163	protein_coding	Gigyf1	exon	ENSMUSG00000029714	ProperStrand	49	chr9	15118328	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-6.4910
chr5	133933230	133933320	LTR	MTEb	MaLR	chr5MTEb133933119	NonProperStrand	1	chr5	133933398	133933488	SINE	RSINE1	B4	chr5RSINE1133933368	NonProperStrand	1	1	-inf
chr1	42755254	42755270	protein_coding	Pou3f3	exon	ENSMUSG00000045515	NonProperStrand	117	chr1	162966812	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-4.9550
chr17	80603547	80603569	protein_coding	Srsf7	exon	ENSMUSG00000024097	ProperStrand	31	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.8473
chr5	110752493	110752593	protein_coding	Pole	intron	ENSMUSG00000007080	ProperStrand	125	chr16	23111691	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-1.7663
chr19	6260027	6260120	protein_coding	Atg2a	exon	ENSMUSG00000024773	ProperStrand	97	chr16	23110913	23110956	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	7	-3.0694
chr18	35714264	35714292	lincRNA	Snhg4	intron	ENSMUSG00000090430	ProperStrand	270	chr11	106362304	106362340	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-3.0017
chr16	8689762	8689862	protein_coding	Usp7	utr3	ENSMUSG00000022710	ProperStrand	118	chr4	131865930	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.8421
chr7	103624731	103624811	protein_coding	Odz4	intron	ENSMUSG00000048078	ProperStrand	93	chr2	98507285	98507375	protein_coding	Gm10800	exon	ENSMUSG00000075014	NonProperStrand	12	1	-15.7188
chr16	17894461	17894477	protein_coding	Tssk1	exon	ENSMUSG00000041566	NonProperStrand	62	chr9	15119631	15119662	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.5729
chr3	87718938	87719048	protein_coding	Hdgf	utr3	ENSMUSG00000004897	ProperStrand	117	chr6	128233161	128233180	protein_coding	Tead4	intron	ENSMUSG00000030353	NonProperStrand	5	3	-19.3362
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr14	61398407	61398423	protein_coding	C1qtnf9	exon	ENSMUSG00000071347	ProperStrand	187	1	-9.0922
chr18	70728114	70728133	protein_coding	Mbd2	utr5	ENSMUSG00000024513	NonProperStrand	13	chr7	13514815	13514831	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	1	-11.7785
chr13	21872110	21872182	protein_coding	Hist1h1b	exon	ENSMUSG00000058773	ProperStrand	65	chr11	77995188	77995232	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-6.0250
chr4	11118669	11118688	protein_coding	Ccne2	utr5	ENSMUSG00000028212	NonProperStrand	3	chr2	146049280	146049296	protein_coding	Insm1	exon	ENSMUSG00000068154	ProperStrand	8	1	-20.4785
chr11	6520321	6520458	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	chr10	110918548	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	5	-1.1745
chr9	51099885	51099901	protein_coding	1810046K07Rik	exon	ENSMUSG00000036027	NonProperStrand	1	chr10	23505152	23505215	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-inf
chr5	57072494	57072511	LINE	L1_Mur3	L1	chr5L1_Mur357071921	ProperStrand	3	chr2	180198848	180198948	protein_coding	Slco4a1	exon	ENSMUSG00000038963	ProperStrand	10	3	-inf
chr17	46266429	46266529	protein_coding	Rsph9	intron	ENSMUSG00000023966	NonProperStrand	5	chr7	116664872	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-12.3114
chr2	155466345	155466435	protein_coding-noncoding	Trpc4ap	utr3	ENSMUSG00000038324	NonProperStrand	1	chr2	155465298	155466288	protein_coding	Trpc4ap	exon	ENSMUSG00000038324	NonProperStrand	4	1	-inf
chr5	114388927	114389027	protein_coding	Ssh1	utr3	ENSMUSG00000042121	ProperStrand	8	chr9	15118563	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	1	-13.4778
chr11	101378716	101383795	protein_coding	Brca1	exon	ENSMUSG00000017146	ProperStrand	51	chr7	148634791	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	4	-13.7987
chr11	82692475	82692491	protein_coding	Rad51l3	exon	ENSMUSG00000018841	ProperStrand	112	chr2	89368462	89368478	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	1	-9.1069
chr10	80641963	80642149	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr17	71990941	71990999	snoRNA	ENSMUSG00000092713_CT010429.1	.	ENSMUSG00000092713	ProperStrand	182	1	-3.9609
chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	chr15	98350201	98350270	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-1.0838
chr12	87811188	87811239	protein_coding	Esrrb	exon	ENSMUSG00000021255	ProperStrand	254	chrX	91269314	91269331	pseudogene	Gm6987	.	ENSMUSG00000081055	ProperStrand	1	1	-inf
chr10	79321981	79322103	protein_coding	Ptbp1	exon	ENSMUSG00000006498	ProperStrand	129	chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	1	-7.5367
chr8	93576309	93576409	protein_coding	Chd9	utr3	ENSMUSG00000056608	ProperStrand	35	chr7	118219574	118219602	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-5.2089
chr12	57438805	57438889	protein_coding	Mbip	intron	ENSMUSG00000021028	ProperStrand	15	chr16	23111743	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-7.4115
chr19	10682851	10682946	protein_coding	Ddb1	exon	ENSMUSG00000024740	ProperStrand	304	chr18	35102297	35102342	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-3.4749
chr9	44721446	44721474	protein_coding	Atp5l	utr3	ENSMUSG00000038717	ProperStrand	10	chr16	23110476	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.8693
chr8	72613823	72613839	protein_coding	Hapln4	utr3	ENSMUSG00000007594	NonProperStrand	85	chr16	90224630	90225395	protein_coding	Sod1	exon	ENSMUSG00000022982	ProperStrand	75	1	-12.1644
chr3	86978572	86978591	protein_coding	Kirrel	utr5	ENSMUSG00000041734	NonProperStrand	8	chr7	67125763	67125825	snoRNA	ENSMUSG00000089375_Snord107	.	ENSMUSG00000089375	ProperStrand	451	3	-19.9133
chr5	119197398	119197457	protein_coding	Med13l	exon	ENSMUSG00000018076	ProperStrand	226	chr9	15119728	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-0.7039
chr14	31688314	31688404	protein_coding	Tmem110	utr3	ENSMUSG00000006526	ProperStrand	13	chr16	23110843	23110880	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.3283
chr16	23110984	23111010	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr7	86805811	86810581	protein_coding	5730590G19Rik	exon	ENSMUSG00000046591	ProperStrand	45	1	-9.5922
chr11	73298701	73298719	LINE	Lx	L1	chr11Lx73298585	NonProperStrand	2	chr4	147533800	147533900	protein_coding	Fbxo44	utr5	ENSMUSG00000029001	ProperStrand	3	2	-inf
chr10	127521129	127521390	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr15	82980192	82980222	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	2	-4.7415
chr13	96374713	96374729	protein_coding	F2r	exon	ENSMUSG00000048376	NonProperStrand	88	chr11	120208509	120208533	protein_coding	Actg1	exon	ENSMUSG00000062825	ProperStrand	178	1	-10.3619
chr2	121167358	121167458	protein_coding	Ppip5k1	exon	ENSMUSG00000033526	ProperStrand	85	chr4	131908689	131908709	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.7895
chr18	37924900	37924970	lincRNA	Gm16882	intron	ENSMUSG00000085906	ProperStrand	7	chr17	35089182	35089239	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-9.8638
chr8	44269832	44269890	protein_coding	Triml2	intron	ENSMUSG00000091490	ProperStrand	32	chr15	79908956	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-6.7153
chr2	44520563	44520598	protein_coding	Gtdc1	intron	ENSMUSG00000036890	ProperStrand	22	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.4786
chr16	17294064	17295515	protein_coding	Pi4ka	exon	ENSMUSG00000041720	ProperStrand	39	chr11	69481394	69481474	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.9984
chr19	10294020	10294110	protein_coding	Gm98	exon	ENSMUSG00000036098	ProperStrand	26	chr7	109312211	109312291	protein_coding	Nup98	utr5	ENSMUSG00000063550	ProperStrand	100	1	-13.9841
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr5	108334207	108334335	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	6	-3.7069
chr5	111184782	111184877	protein_coding	Ep400	exon	ENSMUSG00000029505	NonProperStrand	4	chr16	23110963	23110999	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	NonProperStrand	93	2	-19.5777
chr10	76550161	76551701	protein_coding	Col18a1	exon	ENSMUSG00000001435	ProperStrand	287	chr4	116827118	116827171	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-4.0034
chr2	4829164	4829180	protein_coding	Sephs1	utr3	ENSMUSG00000026662	NonProperStrand	271	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-3.0181
chr10	17443767	17443868	protein_coding	Cited2	exon	ENSMUSG00000039910	ProperStrand	64	chr9	120039623	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.2015
chr9	43921500	43921580	protein_coding	Rnf26	utr5	ENSMUSG00000053128	ProperStrand	30	chr6	115757992	115758082	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-6.8437
chr8	13416897	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr13	112278554	112278570	protein_coding	Gpbp1	utr5	ENSMUSG00000032745	ProperStrand	85	1	-5.7685
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	3	-5.6685
chr19	57563703	57563746	protein_coding	Trub1	utr3	ENSMUSG00000025086	ProperStrand	19	chr4	131908688	131908720	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-5.3903
chr4	43545781	43545797	protein_coding	Tln1	exon	ENSMUSG00000028465	NonProperStrand	2	chr2	130102055	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-12.7710
chr2	164311966	164311983	protein_coding	Dbndd2	utr5	ENSMUSG00000017734	ProperStrand	53	chr2	32501530	32501551	protein_coding	Ak1	intron	ENSMUSG00000026817	NonProperStrand	10	1	-17.1476
chr6	124696135	124696182	protein_coding	Atn1	exon	ENSMUSG00000004263	ProperStrand	20	chr14	64829132	64829149	protein_coding	Msra	intron	ENSMUSG00000054733	NonProperStrand	84	2	-20.9907
chr5	21244657	21244693	protein_coding	Pmpcb	utr5	ENSMUSG00000029017	ProperStrand	16	chr17	35299544	35299634	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-7.4021
chr7	19786968	19787212	protein_coding	Eml2	exon	ENSMUSG00000040811	ProperStrand	33	chr14	33005138	33005209	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	5	-19.0446
chr6	83198879	83198896	protein_coding	Slc4a5	intron	ENSMUSG00000068323	NonProperStrand	11	chr19	8963027	8963080	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.4574
chr16	29628842	29629744	protein_coding	Opa1	exon	ENSMUSG00000038084	ProperStrand	33	chr5	121655063	121655143	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.8873
chr9	40480354	40480371	SINE	MIRb	MIR	chr9MIRb40480231	NonProperStrand	1	chr4	133927701	133927776	protein_coding	Extl1	utr5	ENSMUSG00000028838	ProperStrand	14	1	-inf
chr11	84626794	84626858	protein_coding	Mrm1	utr3	ENSMUSG00000018405	NonProperStrand	3	chr19	31977853	31977872	protein_coding	A1cf	intron	ENSMUSG00000052595	NonProperStrand	8	2	-20.5138
chr3	87689184	87689203	protein_coding	Prcc	exon	ENSMUSG00000004895	ProperStrand	38	chr15	79913314	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.4538
mmu-miR-6240	6	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr9	65049532	65049610	snRNA	ENSMUSG00000075930_U5	.	ENSMUSG00000075930	ProperStrand	175	2	-6.4783
chr5	21263225	21263597	protein_coding	Dnajc2	exon	ENSMUSG00000029014	ProperStrand	31	chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	1	-13.8985
chr3	79263576	79266071	protein_coding	Fnip2	utr3	ENSMUSG00000061175	ProperStrand	45	chr16	23111454	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.6772
chr5	144267789	144267816	protein_coding	Rac1	utr3	ENSMUSG00000001847	ProperStrand	32	chr9	109778068	109778137	protein_coding	Cdc25a	utr5	ENSMUSG00000032477	ProperStrand	27	2	-21.1250
chr6	125007588	125007609	protein_coding	Acrbp	intron	ENSMUSG00000072770	NonProperStrand	1	chr8	73419703	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-inf
chr4	115484063	115484089	protein_coding	Atpaf1	utr3	ENSMUSG00000028710	ProperStrand	202	chr4	131866169	131866283	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-1.5976
chr5	138397437	138397481	protein_coding	Gjc3	utr3	ENSMUSG00000056966	ProperStrand	2	chr1	74902715	74902731	protein_coding	Cdk5r2	exon	ENSMUSG00000090071	NonProperStrand	49	1	-inf
chr8	12757418	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr19	8963027	8963205	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	13	-6.0491
chr6	144026592	144026610	protein_coding	Sox5	intron	ENSMUSG00000041540	NonProperStrand	49	chr14	76372292	76372393	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	1	-9.3977
chr17	35043957	35044312	protein_coding	Ehmt2	exon	ENSMUSG00000013787	ProperStrand	42	chr9	15119648	15119728	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.2646
chr10	76781280	76781380	protein_coding	Adarb1	intron	ENSMUSG00000020262	ProperStrand	15	chr11	106362336	106362373	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-8.6280
chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	chr2	130102052	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-1.1767
chr15	98604924	98606960	protein_coding	Wnt10b	exon	ENSMUSG00000022996	NonProperStrand	189	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-0.8768
chr11	29421332	29421349	SINE	B3A	B2	chr11B3A29421267	NonProperStrand	21	chrX	34622958	34623025	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-5.1646
chr2	31632221	31632239	protein_coding	Abl1	intron	ENSMUSG00000026842	NonProperStrand	6	chr12	17552949	17553032	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-9.7905
chr1	192777775	192777792	protein_coding	Vash2	intron	ENSMUSG00000037568	ProperStrand	34	chr7	118219597	118219629	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-5.2657
chr9	21637355	21637371	protein_coding	Dock6	exon	ENSMUSG00000032198	ProperStrand	155	chr18	35716762	35716788	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-0.8183
chr6	5992226	5992316	protein_coding	Slc25a13	exon	ENSMUSG00000015112	ProperStrand	78	chr4	131908274	131908354	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.0614
chr7	150253571	150253657	protein_coding	Cd81	utr3	ENSMUSG00000037706	ProperStrand	88	chr4	131908252	131908342	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	7	-9.4767
chr1	40053934	40053951	protein_coding	Map4k4	exon	ENSMUSG00000026074	ProperStrand	348	chr18	33954884	33954928	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-0.7696
chr9	123763783	123763799	protein_coding	Xcr1	utr3	ENSMUSG00000060509	NonProperStrand	40	chr4	131908753	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.8200
chr9	65049529	65049621	snRNA	ENSMUSG00000075930_U5	.	ENSMUSG00000075930	ProperStrand	175	chr9	120037910	120037933	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	3	-7.0629
chr19	53082307	53082324	protein_coding	Xpnpep1	intron	ENSMUSG00000025027	NonProperStrand	58	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.3380
chr2	31314668	31314768	protein_coding	Hmcn2	intron	ENSMUSG00000055632	ProperStrand	20	chr19	8799052	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-8.0292
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr14	11125608	11125625	protein_coding	Fhit	intron	ENSMUSG00000060579	NonProperStrand	51	1	-11.6981
chr10	75389200	75389300	protein_coding	Mmp11	exon	ENSMUSG00000000901	ProperStrand	24	chr1	162965539	162965594	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.0142
mmu-miR-6240	1	26	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	4	-8.0578
chr8	73202293	73202341	protein_coding	Lsm4	exon	ENSMUSG00000031848	ProperStrand	19	chr18	33954843	33954943	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	5	-20.2244
chr1	173341933	173341949	protein_coding	Usf1	utr5	ENSMUSG00000026641	NonProperStrand	144	chr2	158451026	158451043	protein_coding	Actr5	exon	ENSMUSG00000037761	NonProperStrand	94	1	-10.6536
chr2	162909147	162909198	protein_coding	Mybl2	utr3	ENSMUSG00000017861	ProperStrand	230	chr19	8963032	8963048	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-7.4724
chr7	87445985	87449267	protein_coding	Prc1	exon	ENSMUSG00000038943	ProperStrand	35	chr11	69483136	69483190	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-5.8367
chrX	98851059	98856660	protein_coding	Ogt	exon	ENSMUSG00000034160	ProperStrand	49	chr16	23111743	23111823	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.2326
chr12	88223042	88223093	protein_coding	6430527G18Rik	exon	ENSMUSG00000034168	ProperStrand	46	chrX	34622929	34623019	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-3.6584
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr10	39978434	39978474	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-1.4851
chr17	23747750	23747850	protein_coding	Zscan10	utr3	ENSMUSG00000023902	ProperStrand	9	chr16	23111772	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.4225
chr11	58682398	58682415	protein_coding	2810021J22Rik	utr5	ENSMUSG00000020491	ProperStrand	162	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-8.4400
chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr11	98827251	98827343	protein_coding	Rara	intron	ENSMUSG00000037992	ProperStrand	37	3	-16.6342
chr3	55008359	55011538	protein_coding	Sohlh2	exon	ENSMUSG00000027794	ProperStrand	11	chr11	69483197	69483268	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-9.3712
chr2	172825762	172825862	protein_coding	Rae1	utr5	ENSMUSG00000027509	ProperStrand	38	chr11	121008404	121008476	protein_coding	Tex19.1	exon	ENSMUSG00000039329	ProperStrand	12	1	-17.6232
chr5	8397749	8397839	protein_coding	Dbf4	exon	ENSMUSG00000002297	ProperStrand	38	chr17	27700406	27700486	protein_coding	Hmga1	utr3	ENSMUSG00000046711	ProperStrand	180	1	-12.0315
chrX	139270616	139270650	protein_coding	Tmem164	utr3	ENSMUSG00000047045	ProperStrand	13	chr15	5068411	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	3	-inf
chr5	149100499	149100516	protein_coding	Mtus2	exon	ENSMUSG00000029651	ProperStrand	114	chr5	108334195	108334258	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-3.6072
chr5	92875347	92875364	protein_coding	Scarb2	exon	ENSMUSG00000029426	ProperStrand	30	chr11	6428108	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.4908
chr19	8895078	8895141	protein_coding	Hnrnpul2	exon	ENSMUSG00000071659	ProperStrand	93	chr11	6428077	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.4233
chr19	53406810	53406826	protein_coding	Mxi1	intron	ENSMUSG00000025025	ProperStrand	51	chr5	115939537	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-8.1906
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr15	77356785	77356801	protein_coding	Apol7c	exon	ENSMUSG00000044309	ProperStrand	197	1	-6.3542
chr2	158254611	158254633	protein_coding	Ralgapb	intron	ENSMUSG00000027652	ProperStrand	22	chr9	113580892	113580992	protein_coding	Pdcd6ip	exon	ENSMUSG00000032504	ProperStrand	53	1	-15.5892
chr13	9833560	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr11	97039653	97040211	protein_coding	Kpnb1	exon	ENSMUSG00000001440	ProperStrand	197	1	-2.7506
chr5	31360489	31361057	protein_coding	Cad	exon	ENSMUSG00000013629	ProperStrand	260	chr14	33005094	33005166	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-1.4864
chr19	5365862	5365888	protein_coding	Banf1	exon	ENSMUSG00000024844	ProperStrand	34	chr4	57706987	57707003	protein_coding	Palm2	intron	ENSMUSG00000090053	NonProperStrand	187	1	-12.1797
chr8	125626772	125626872	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	chr16	22009804	22011571	protein_coding	Senp2	exon	ENSMUSG00000022855	NonProperStrand	5	2	-inf
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr13	63612936	63612952	protein_coding	Ptch1	exon	ENSMUSG00000021466	NonProperStrand	118	1	-6.4529
mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr14	75132176	75135823	protein_coding	Esd	utr5	ENSMUSG00000021996	ProperStrand	5	2	-17.6038
chr11	21465864	21465905	protein_coding	Mdh1	exon	ENSMUSG00000020321	ProperStrand	16	chr3	109858010	109858028	protein_coding	Ntng1	intron	ENSMUSG00000059857	ProperStrand	25	1	-17.5947
chr10	120847991	120848067	protein_coding	Rassf3	utr3	ENSMUSG00000025795	ProperStrand	26	chr12	88778634	88778724	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-8.1714
chr2	38307012	38307029	lincRNA	Gm13589	intron	ENSMUSG00000085950	NonProperStrand	31	chr9	70591731	70591773	protein_coding	Adam10	exon	ENSMUSG00000054693	ProperStrand	12	1	-17.6772
chr2	26768573	26768736	protein_coding	Rpl7a	exon	ENSMUSG00000062647	ProperStrand	234	chr9	120039540	120039630	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.1256
chr5	136707644	136707662	protein_coding	Sh2b2	exon	ENSMUSG00000005057	NonProperStrand	101	chr11	6428035	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	14	-inf
chr5	143722035	143734053	protein_coding	Fscn1	utr5	ENSMUSG00000029581	ProperStrand	200	chr1	162965531	162965554	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	15	-19.5139
chr13	31179039	31179119	LTR	MTA_Mm	MaLR	chr13MTA_Mm31178799	ProperStrand	1	chr3	58457402	58457492	LTR	MTA_Mm	MaLR	chr3MTA_Mm58457231	ProperStrand	1	1	-inf
chr10	80641721	80641785	protein_coding	Eef2	intron	ENSMUSG00000034994	ProperStrand	2244	chr10	80641693	80641725	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	5	-6.3590
chr11	115024687	115024777	protein_coding	Slc9a3r1	utr5	ENSMUSG00000020733	ProperStrand	7	chr7	117189975	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-7.5942
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr17	33955113	33955129	protein_coding	Kank3	exon	ENSMUSG00000042099	ProperStrand	64	1	-5.7768
chr3	89147863	89148086	protein_coding	Adam15	exon	ENSMUSG00000028041	ProperStrand	40	chr18	35716736	35716826	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.8651
chr7	104683036	104683738	protein_coding	Ints4	exon	ENSMUSG00000025133	ProperStrand	19	chr11	97642952	97643014	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.5938
chr4	41720716	41720733	protein_coding	Ccl27a	utr5	ENSMUSG00000073888	NonProperStrand	2	chr4	131908235	131908332	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-inf
chr2	78250756	78250846	LTR	RMER16-int	ERVK	chr2RMER16-int78249889	ProperStrand	1	chr2	78251306	78251386	LTR	RMER16-int	ERVK	chr2RMER16-int78251258	ProperStrand	1	1	-inf
chr9	78055608	78055698	protein_coding	Gsta4	exon	ENSMUSG00000032348	ProperStrand	82	chr9	120038564	120038644	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-4.3934
chrX	107396011	107396027	LTR	RMER17A	ERVK	chrXRMER17A107395334	NonProperStrand	27	chr12	111933477	111933520	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	1	-9.8691
chr5	34112034	34112050	protein_coding	Letm1	exon	ENSMUSG00000005299	NonProperStrand	145	chr11	62416621	62416641	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-3.4955
chr17	38290745	38290764	LTR	MurERV4-int	ERVK	chr17MurERV4-int38290059	ProperStrand	21	chr15	72701416	72701432	protein_coding	Trappc9	intron	ENSMUSG00000047921	ProperStrand	44	1	-16.0772
chr19	47333642	47333729	protein_coding	Neurl1a	utr3	ENSMUSG00000006435	ProperStrand	41	chr8	98265681	98265755	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	1	-10.7577
chr4	137311191	137311254	protein_coding	Alpl	intron	ENSMUSG00000028766	ProperStrand	80	chr9	78326482	78326544	protein_coding	Eef1a1	utr3	ENSMUSG00000037742	ProperStrand	1990	2	-9.4036
chr15	51696953	51697003	protein_coding	Eif3h	exon	ENSMUSG00000022312	ProperStrand	45	chr9	15118256	15118321	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	3	-9.7785
chr13	34436854	34436870	protein_coding	Slc22a23	utr5	ENSMUSG00000038267	ProperStrand	95	chr1	9932550	9932626	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	3	-15.4384
chr1	89346271	89346305	protein_coding	Gigyf2	utr3	ENSMUSG00000048000	ProperStrand	128	chr4	131865380	131865470	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	9	-20.9252
chr8	127384910	127385000	protein_coding	2810004N23Rik	exon	ENSMUSG00000031984	ProperStrand	22	chrX	34622937	34623017	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-5.0729
chr17	27559700	27559717	protein_coding	Grm4	utr3	ENSMUSG00000063239	ProperStrand	147	chr12	112779190	112779280	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-3.1035
chr8	13416896	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	4	-1.3469
chr4	85016349	85016365	protein_coding	Sh3gl2	intron	ENSMUSG00000028488	NonProperStrand	313	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-4.0247
chr7	148634651	148636926	protein_coding	Rplp2	exon	ENSMUSG00000025508	ProperStrand	106	chr2	32069862	32069879	protein_coding	Prrc2b	exon	ENSMUSG00000039262	ProperStrand	344	1	-8.6744
chr18	42919484	42919507	protein_coding	Ppp2r2b	intron	ENSMUSG00000024500	ProperStrand	25	chr16	23110904	23110957	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.2939
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr10	63621197	63621214	protein_coding	Ctnna3	intron	ENSMUSG00000060843	NonProperStrand	22	1	-12.4609
chr17	75967952	75968032	LTR	RLTR17	ERVK	chr17RLTR1775967687	ProperStrand	1	chr17	75968365	75968455	LTR	RMER3D-int	ERVK	chr17RMER3D-int75968234	ProperStrand	1	1	-inf
chr9	40612593	40612682	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr16	57391760	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	2	-4.9174
chr12	32824952	32824968	SINE	B3A	B2	chr12B3A32824903	NonProperStrand	1	chr17	24857716	24857775	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-inf
chr6	72372350	72372406	protein_coding	Ggcx	intron	ENSMUSG00000053460	ProperStrand	2	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-10.4671
chr4	116826699	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	chr3	90279769	90279859	tRNA	tRNA792-MetCAT	.	258472	ProperStrand	42	8	-18.9826
chr8	13876097	13876196	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	chr1	9932550	9932626	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	3	-5.3475
chr12	71146391	71146407	protein_coding	Nin	exon	ENSMUSG00000021068	ProperStrand	95	chr1	180267497	180267571	protein_coding	Hnrnpu	exon	ENSMUSG00000039630	ProperStrand	286	1	-9.2614
chr12	17557658	17557706	protein_coding	Odc1	utr3	ENSMUSG00000011179	ProperStrand	173	chr11	97642952	97642982	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-0.9011
chr11	96668132	96668172	protein_coding-noncoding	Cbx1	utr5	ENSMUSG00000018666	ProperStrand	17	chr18	35714144	35714256	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	4	-18.2642
chr14	99698283	99698360	protein_coding	Klf5	exon	ENSMUSG00000005148	ProperStrand	39	chr1	162965555	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.0770
chr5	143830672	143830703	protein_coding	Rnf216	intron	ENSMUSG00000045078	ProperStrand	38	chr4	56910497	56910618	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-7.0135
chr10	39382217	39382297	lincRNA	E130307A14Rik	intron	ENSMUSG00000087177	ProperStrand	14	chr16	23110898	23110988	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.2008
chr9	37192069	37192086	protein_coding	Hepacam	intron	ENSMUSG00000046240	NonProperStrand	29	chr9	120039533	120039626	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-4.6899
chr12	88488443	88496424	protein_coding	Pomt2	exon	ENSMUSG00000034126	NonProperStrand	331	chr9	114333062	114333135	protein_coding	Glb1	exon	ENSMUSG00000045594	ProperStrand	67	1	-9.6697
chr13	55378995	55379017	protein_coding	Nsd1	exon	ENSMUSG00000021488	ProperStrand	186	chr1	75484537	75484553	protein_coding	Obsl1	exon	ENSMUSG00000026211	NonProperStrand	192	1	-8.7141
chr17	35647274	35647374	protein_coding	Pou5f1	exon	ENSMUSG00000024406	ProperStrand	104	chr2	26493366	26493404	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-2.7481
chr13	23409361	23409409	processed_transcript	4930586N03Rik	.	ENSMUSG00000087097	ProperStrand	6	chr14	33005139	33005225	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	2	-14.0159
chr3	88715214	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr2	138188029	138188045	protein_coding	Btbd3	intron	ENSMUSG00000062098	NonProperStrand	121	1	-5.8489
chr8	74780859	74780945	protein_coding	Ap1m1	utr3	ENSMUSG00000003033	ProperStrand	4	chr9	110282242	110282258	protein_coding	Scap	exon	ENSMUSG00000032485	ProperStrand	37	1	-18.9447
chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	chr7	134671387	134671505	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-1.0872
chr2	70401918	70401934	protein_coding	Gad1	exon	ENSMUSG00000070880	NonProperStrand	15	chr6	71832635	71832687	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-8.3916
chr5	41027717	41027735	LINE	L1Md_F2	L1	chr5L1Md_F241027376	ProperStrand	1	chr10	121242090	121244926	protein_coding	Srgap1	exon	ENSMUSG00000020121	NonProperStrand	80	1	-inf
chr1	135033562	135033585	protein_coding	Ppp1r15b	utr3	ENSMUSG00000046062	ProperStrand	46	chr16	23111424	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.6437
chr16	23110464	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	chr10	62228330	62228388	snoRNA	ENSMUSG00000080469_Snord98	.	ENSMUSG00000080469	ProperStrand	124	3	-3.9777
chr9	48013215	48013232	LINE	L1M2	L1	chr9L1M248012984	NonProperStrand	34	chr14	32989544	32989611	protein_coding	Ncoa4	exon	ENSMUSG00000056234	ProperStrand	15	1	-17.1300
mmu-miR-3963	3	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	NonProperStrand	1	chr12	17552962	17553052	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	NonProperStrand	16	1	-inf
chr6	127915754	127915843	protein_coding	Tspan9	exon	ENSMUSG00000030352	NonProperStrand	7	chr5	30581447	30581527	protein_coding	Ept1	intron	ENSMUSG00000075703	NonProperStrand	2	1	-inf
chr5	145532297	145532393	protein_coding	Trrap	intron	ENSMUSG00000045482	ProperStrand	399	chr18	35714143	35714260	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-1.2599
mmu-miR-1291	0	26	miRNA	mmu-miR-1291	.	mmu-miR-1291	ProperStrand	103	chr16	23111374	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	7	-7.6249
chr7	135151200	135151302	protein_coding	Trim72	exon	ENSMUSG00000042828	ProperStrand	24	chr16	23110454	23110516	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.1305
chr7	109012605	109016925	protein_coding	Folr1	utr5	ENSMUSG00000001827	ProperStrand	12	chr14	56224723	56224958	protein_coding	Irf9	exon	ENSMUSG00000002325	ProperStrand	2	1	-inf
chr17	66173659	66190422	protein_coding	Ppp4r1	utr3	ENSMUSG00000061950	ProperStrand	46	chr19	8963031	8963180	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-7.1216
chr2	113984799	113984826	protein_coding-noncoding	Aqr	utr3	ENSMUSG00000040383	ProperStrand	7	chr17	32342960	32343060	protein_coding	Brd4	utr3	ENSMUSG00000024002	ProperStrand	121	7	-inf
chr8	23461049	23461068	protein_coding	Tpte	intron	ENSMUSG00000031481	NonProperStrand	4	chr1	162965531	162965577	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-8.7752
chr13	9833551	9833669	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr2	22444186	22444628	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	2	-1.1371
chr16	91583614	91587241	protein_coding	Tmem50b	exon	ENSMUSG00000022964	ProperStrand	7	chr7	29136585	29136653	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-10.7477
chr10	78153951	78154041	SINE	B3A	B2	chr10B3A78153924	ProperStrand	1	chr10	78153653	78153733	Satellite	ZP3AR	Satellite	chr10ZP3AR78153637	ProperStrand	1	1	-inf
chr4	133983070	133983109	protein_coding	Pafah2	utr3	ENSMUSG00000037366	ProperStrand	19	chr1	194571803	194571880	snRNA	ENSMUSG00000064881_U5	.	ENSMUSG00000064881	ProperStrand	187	1	-13.3687
chr13	98206512	98206602	lincRNA	Gm11019	intron	ENSMUSG00000078952	ProperStrand	113	chr5	34343601	34343691	protein_coding	Nat8l	exon	ENSMUSG00000048142	NonProperStrand	7	1	-16.5385
chr4	133237365	133237451	protein_coding	Arid1a	exon	ENSMUSG00000007880	ProperStrand	465	chr2	181405343	181405359	protein_coding	Sox18	exon	ENSMUSG00000046470	ProperStrand	96	1	-8.2728
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr2	130101259	130101308	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-1.5222
chr4	129005962	129011815	protein_coding	Rbbp4	exon	ENSMUSG00000057236	ProperStrand	22	chr9	120039583	120039663	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-5.2308
chr7	29605568	29605608	protein_coding	Hnrnpl	exon	ENSMUSG00000015165	ProperStrand	150	chr11	98283671	98283689	protein_coding	Erbb2	intron	ENSMUSG00000062312	NonProperStrand	6	1	-16.2335
chr13	38283430	38283447	protein_coding	Dsp	exon	ENSMUSG00000054889	NonProperStrand	4	chr18	73693120	73693147	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-11.1535
chr4	106720781	106720803	protein_coding	Ssbp3	utr3	ENSMUSG00000061887	ProperStrand	36	chr4	131908236	131908299	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.2156
chr13	74470613	74471805	protein_coding	Sdha	exon	ENSMUSG00000021577	ProperStrand	70	chr2	158185528	158185596	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	2	-10.0301
chr9	120038553	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	chr7	89110636	89110655	snoRNA	ENSMUSG00000089111_SNORA74	.	ENSMUSG00000089111	ProperStrand	7	1	-7.2707
chr8	46439259	46439275	protein_coding	Fam149a	exon	ENSMUSG00000070044	ProperStrand	57	chr5	130300419	130300500	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.5978
chr4	138732491	138734008	antisense	Gm16287	.	ENSMUSG00000073739	NonProperStrand	7	chr6	70794801	70794819	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	1	-15.8562
chr13	41838421	41838511	LINE	L1Md_T	L1	chr13L1Md_T41838444	ProperStrand	1	chr13	41838260	41838350	LTR	MTD	MaLR	chr13MTD41838025	NonProperStrand	1	1	-inf
chr6	35460456	35460487	protein_coding	Mtpn	utr3	ENSMUSG00000029840	ProperStrand	18	chr1	145626115	145626192	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-11.2691
chrX	98901422	98901488	SINE	B1_Mus1	Alu	chrXB1_Mus198901335	NonProperStrand	6	chr5	23825941	23825957	protein_coding	Kcnh2	exon	ENSMUSG00000038319	ProperStrand	242	1	-15.2753
chr9	22043789	22043899	protein_coding	Zfp809	intron	ENSMUSG00000057982	ProperStrand	10	chr19	17900099	17900117	snoRNA	ENSMUSG00000089540_snoU13	.	ENSMUSG00000089540	ProperStrand	99	1	-15.9895
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr19	10974847	10975188	protein_coding	Prpf19	exon	ENSMUSG00000024735	ProperStrand	75	1	-5.4666
chr1	191058375	191058394	protein_coding	Kcnk2	intron	ENSMUSG00000037624	ProperStrand	56	chr7	116663712	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-4.6176
chr8	123179692	123179754	protein_coding	Cox4nb	utr3	ENSMUSG00000031819	ProperStrand	21	chr11	69481340	69481443	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	8	-19.7249
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr7	107065549	107065565	protein_coding	Xrra1	exon	ENSMUSG00000035211	NonProperStrand	24	1	-10.4435
chr4	108534191	108534268	protein_coding	Txndc12	utr3	ENSMUSG00000028567	ProperStrand	23	chr18	75160716	75160777	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	1	-11.1269
chr17	13208504	13208557	protein_coding	Sod2	utr3	ENSMUSG00000006818	ProperStrand	17	chr1	88247838	88247874	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	4	-inf
chr14	76815724	76815824	protein_coding	Tsc22d1	utr5	ENSMUSG00000022010	ProperStrand	86	chr2	130101242	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	2	-9.5734
chr4	155264468	155264539	protein_coding	Pusl1	intron	ENSMUSG00000051557	ProperStrand	4	chr16	23110966	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.6489
chr6	50515279	50515313	protein_coding	Cycs	exon	ENSMUSG00000063694	ProperStrand	11	chr16	23110902	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-10.0359
chr15	37574739	37574758	protein_coding	Ncald	intron	ENSMUSG00000051359	NonProperStrand	12	chr14	76247758	76247836	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-7.3616
chr15	101754849	101754865	protein_coding	Krt4	exon	ENSMUSG00000059668	ProperStrand	45	chr2	32818840	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-6.0359
chr9	40003744	40003762	protein_coding	Zfp202	intron	ENSMUSG00000025602	ProperStrand	1	chr2	26766982	26767065	protein_coding	Rpl7a	exon	ENSMUSG00000062647	ProperStrand	234	1	-inf
chr9	65507813	65507842	protein_coding	Rbpms2	utr3	ENSMUSG00000032387	ProperStrand	85	chr18	35102298	35102347	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-5.9033
chr11	78313939	78313956	protein_coding	Vtn	exon	ENSMUSG00000017344	ProperStrand	188	chr1	162968442	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-3.8814
chr6	125089726	125089918	protein_coding	Nop2	exon	ENSMUSG00000038279	ProperStrand	39	chr4	131825994	131826036	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	1	-10.0850
chr13	6593699	6593753	protein_coding-noncoding	Pfkp	utr3	ENSMUSG00000021196	ProperStrand	20	chr7	29136569	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.3737
chr3	123210854	123210980	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	chr3	19528373	19528843	tRNA	tRNA27-TyrGTA	.	36516	ProperStrand	3	3	-inf
chr8	72860031	72876847	protein_coding	Upf1	intron	ENSMUSG00000058301	ProperStrand	90	chr16	23110828	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-1.1689
chr16	96391589	96391613	protein_coding	Lca5l	intron	ENSMUSG00000045275	NonProperStrand	210	chr15	98350209	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-2.4670
chr10	126481920	126481937	protein_coding	Mettl1	intron	ENSMUSG00000006732	ProperStrand	5	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-16.8426
chr10	75955693	75956192	protein_coding	Mcm3ap	exon	ENSMUSG00000001150	ProperStrand	95	chr17	24770197	24770218	protein_coding	Nthl1	intron	ENSMUSG00000041429	ProperStrand	4	2	-20.1898
chr11	75578875	75578903	protein_coding	Ywhae	utr3	ENSMUSG00000020849	ProperStrand	176	chr15	76711714	76711780	protein_coding	Zfp7	intron	ENSMUSG00000033669	ProperStrand	15	1	-13.9794
chr9	30235085	30235101	protein_coding	Snx19	exon	ENSMUSG00000031993	ProperStrand	353	chr9	48845899	48845962	protein_coding	Usp28	exon	ENSMUSG00000032267	ProperStrand	63	1	-9.6650
chr11	106684003	106684019	protein_coding	Smurf2	exon	ENSMUSG00000018363	ProperStrand	79	chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-5.9120
chr9	66318168	66319700	protein_coding	Herc1	exon	ENSMUSG00000038664	ProperStrand	81	chr11	87172190	87172206	protein_coding	Ppm1e	exon	ENSMUSG00000046442	ProperStrand	112	1	-11.4564
chr11	32500864	32503675	protein_coding	Stk10	exon	ENSMUSG00000020272	NonProperStrand	73	chr9	120037898	120037969	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-4.3308
chr6	108615215	108615287	protein_coding	Bhlhe40	exon	ENSMUSG00000030103	ProperStrand	11	chr6	71832622	71832687	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-9.0343
chr10	59889378	59889396	protein_coding	Cdh23	exon	ENSMUSG00000012819	NonProperStrand	13	chr10	23505152	23505235	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.8218
chr2	90235299	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	108630393	108630409	protein_coding	Ccdc18	exon	ENSMUSG00000056531	ProperStrand	27	2	-9.8247
chr15	84530135	84531847	protein_coding	Prr5	exon	ENSMUSG00000036106	ProperStrand	9	chr13	96100601	96100691	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	1	-11.9486
chr11	84722945	84722961	protein_coding	Myo19	exon	ENSMUSG00000020527	ProperStrand	82	chr4	123341728	123341744	protein_coding	Macf1	exon	ENSMUSG00000028649	ProperStrand	320	1	-9.3320
chr6	46356135	46356154	protein_coding	Cntnap2	intron	ENSMUSG00000039419	ProperStrand	21	chr18	73693113	73693137	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-7.6156
chr7	109614149	109614230	protein_coding	Rrm1	intron	ENSMUSG00000030978	ProperStrand	14	chr7	116663634	116663724	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	4	-16.7487
chr13	93070432	93070532	protein_coding	Msh3	intron	ENSMUSG00000014850	ProperStrand	10	chr7	116664822	116664869	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-5.9693
chr7	118219889	118220250	protein_coding	Eif4g2	exon	ENSMUSG00000005610	ProperStrand	134	chr10	62486272	62486378	protein_coding	Hnrnph3	intron	ENSMUSG00000020069	ProperStrand	17	2	-21.3951
chr3	95466509	95466571	protein_coding	Mcl1	utr3	ENSMUSG00000038612	ProperStrand	75	chr19	8799829	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-4.5178
chr18	11524797	11524815	LTR	MLT1C	MaLR	chr18MLT1C11524717	ProperStrand	1	chr4	131908356	131908421	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-inf
chr17	28467589	28467619	protein_coding	Rpl10a	exon	ENSMUSG00000037805	ProperStrand	121	chr4	131865855	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-2.7406
mmu-miR-6240	3	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr7	56082249	56082301	protein_coding	Zdhhc13	exon	ENSMUSG00000030471	ProperStrand	6	2	-16.9222
chr9	119336703	119336719	protein_coding	Acvr2b	exon	ENSMUSG00000061393	ProperStrand	21	chr3	123210930	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.9390
chr19	10693735	10693759	protein_coding	Ddb1	exon	ENSMUSG00000024740	ProperStrand	304	chr3	16083589	16083606	protein_coding	Ythdf3	intron	ENSMUSG00000047213	NonProperStrand	18	1	-12.5052
chr1	34309708	34309781	protein_coding	Dst	exon	ENSMUSG00000026131	ProperStrand	461	chr10	110918634	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	6	-5.0767
chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	chr3	153574623	153574653	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	1	-2.4595
chr9	119826285	119835520	protein_coding	Wdr48	exon	ENSMUSG00000032512	ProperStrand	16	chr16	23111373	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-5.9711
chr15	10428113	10428203	protein_coding	Rad1	utr3	ENSMUSG00000022248	ProperStrand	3	chr7	80631183	80631263	protein_coding	Chd2	intron	ENSMUSG00000078671	ProperStrand	69	1	-20.1556
chr13	81814238	81814491	protein_coding	Polr3g	utr3	ENSMUSG00000035834	ProperStrand	14	chr16	23110829	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	7	-17.7031
chr2	158182209	158182276	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	chr9	40612107	40612163	snoRNA	ENSMUSG00000075924_Snord14d	.	ENSMUSG00000075924	ProperStrand	131	1	-3.5260
chr16	17673166	17673266	protein_coding	Med15	exon	ENSMUSG00000012114	ProperStrand	24	chr2	91770107	91770123	protein_coding	Mdk	utr3	ENSMUSG00000027239	NonProperStrand	5	1	-19.0819
chr4	43505708	43505798	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr5	3693225	3693241	protein_coding	Ankib1	exon	ENSMUSG00000040351	NonProperStrand	98	1	-2.2220
chr2	91613185	91613203	protein_coding	Ambra1	exon	ENSMUSG00000040506	ProperStrand	65	chr9	120037934	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	2	-7.5657
chr12	71366146	71366166	protein_coding	Trim9	utr3	ENSMUSG00000021071	ProperStrand	6	chr7	109149271	109149287	protein_coding	Numa1	exon	ENSMUSG00000066306	NonProperStrand	171	1	-15.9218
chr2	130103751	130103781	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	chr8	34802321	34802416	snoRNA	ENSMUSG00000088856_SNORA48	.	ENSMUSG00000088856	ProperStrand	236	3	-13.2891
chr4	107430049	107430066	lincRNA	1700047F07Rik	intron	ENSMUSG00000085549	ProperStrand	7	chr5	108336363	108336408	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-9.2393
chr13	63291889	63292389	protein_coding	2010111I01Rik	exon	ENSMUSG00000021458	NonProperStrand	8	chr3	88497879	88497979	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-11.5861
chr14	119865849	119865866	protein_coding	Hs6st3	intron	ENSMUSG00000053465	ProperStrand	15	chr4	131865855	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.2332
chr6	129488677	129491130	protein_coding	Gabarapl1	exon	ENSMUSG00000030161	ProperStrand	9	chr7	29136525	29136565	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.9747
chr8	120134722	120134752	protein_coding	Plcg2	exon	ENSMUSG00000034330	ProperStrand	57	chr4	131908689	131908741	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-2.4821
chr5	141377002	141377018	protein_coding	Card11	exon	ENSMUSG00000036526	ProperStrand	30	chr11	106362638	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-8.7960
chr9	120037923	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	chr4	56910496	56910618	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	9	-3.1421
chr10	7364162	7364210	protein_coding	Pcmt1	exon	ENSMUSG00000019795	ProperStrand	55	chr6	134029351	134029368	protein_coding	Etv6	intron	ENSMUSG00000030199	ProperStrand	46	1	-14.0224
chr7	13516146	13516177	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr7	34992750	34992767	protein_coding	Gpi1	exon	ENSMUSG00000036427	NonProperStrand	40	1	-9.4817
chr9	65049531	65049604	snRNA	ENSMUSG00000075930_U5	.	ENSMUSG00000075930	ProperStrand	175	chr19	8963030	8963165	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-2.5815
chr16	87491626	87493961	protein_coding	Cct8	exon	ENSMUSG00000025613	ProperStrand	65	chr3	123210883	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.9374
chr13	95333998	95334017	protein_coding	Ap3b1	intron	ENSMUSG00000021686	NonProperStrand	24	chr2	26494717	26494759	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.8333
chrX	148341943	148343316	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	chr7	117166723	117166803	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-1.1779
chr1	88247742	88247834	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	chr5	108334195	108334330	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	15	-4.4166
chr5	117736245	117737430	protein_coding	Pebp1	exon	ENSMUSG00000032959	ProperStrand	54	chr18	35714144	35714234	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	8	-inf
chr14	119028926	119030245	protein_coding	Abcc4	exon	ENSMUSG00000032849	ProperStrand	137	chr3	123210854	123210880	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	5	-5.7839
chr7	31757045	31757135	protein_coding	Lsr	exon	ENSMUSG00000001247	ProperStrand	8	chr10	23505185	23505265	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.7871
chr2	90235297	90235345	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	68936358	68936374	protein_coding	Hes7	exon	ENSMUSG00000023781	NonProperStrand	66	2	-7.1528
chr2	25448369	25448427	protein_coding	B230208H17Rik	exon	ENSMUSG00000015087	ProperStrand	25	chr5	65952377	65952395	protein_coding	Ube2k	intron	ENSMUSG00000029203	ProperStrand	289	1	-11.9336
chr7	4745145	4745225	protein_coding	Rpl28	exon	ENSMUSG00000030432	ProperStrand	220	chr14	76247751	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-1.8834
chr17	46301196	46301213	protein_coding	Gtpbp2	exon	ENSMUSG00000023952	ProperStrand	21	chr7	118219704	118219740	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-6.2213
chr3	85941923	85942407	protein_coding	Rps3a	exon	ENSMUSG00000028081	ProperStrand	177	chr4	131865894	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-2.6488
chr16	50474091	50474181	LINE	L1ME4a	L1	chr16L1ME4a50473606	ProperStrand	1	chr16	49697109	49697199	LINE	L1Md_F2	L1	chr16L1Md_F249697063	NonProperStrand	1	1	-inf
chr7	31373624	31373709	protein_coding	Wbp7	exon	ENSMUSG00000006307	ProperStrand	180	chr2	32081173	32081264	snoRNA	ENSMUSG00000092869_AL808027.2	.	ENSMUSG00000092869	ProperStrand	13	3	-19.4052
chr5	54389947	54389965	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	chr18	33954823	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	10	-18.5179
chr6	134967252	134968165	protein_coding	Ddx47	exon	ENSMUSG00000030204	ProperStrand	11	chr7	29136578	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.5623
chr19	45635184	45639440	protein_coding	Dpcd	exon	ENSMUSG00000041035	ProperStrand	3	chr9	121823892	121823908	protein_coding	Cyp8b1	exon	ENSMUSG00000050445	NonProperStrand	101	1	-18.5718
chr6	11855237	11856033	protein_coding	Ndufa4	exon	ENSMUSG00000029632	ProperStrand	9	chr11	69483136	69483192	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-6.0733
chr16	91227718	91227735	protein_coding	Olig2	utr3	ENSMUSG00000039830	NonProperStrand	78	chrX	93136011	93136027	protein_coding	Las1l	exon	ENSMUSG00000057421	ProperStrand	248	1	-9.9410
chr9	78023148	78023168	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr11	40563850	40563950	protein_coding	Ccng1	utr3	ENSMUSG00000020326	ProperStrand	30	5	-inf
chr1	162966242	162966269	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	chr11	69481335	69481413	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	5	-0.7065
chr19	21886769	21886855	protein_coding	Tmem2	exon	ENSMUSG00000024754	ProperStrand	133	chr8	98247194	98247216	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	2	-13.3567
chr7	38748450	38748489	protein_coding	C80913	exon	ENSMUSG00000030421	ProperStrand	25	chr18	35714186	35714256	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-5.1110
chr6	6508404	6510420	protein_coding	Shfm1	utr3	ENSMUSG00000042541	ProperStrand	8	chr4	131908689	131908744	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-16.0670
chr15	84144868	84144968	protein_coding	Parvb	utr3	ENSMUSG00000022438	ProperStrand	127	chr18	35714163	35714219	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-3.8250
chr7	134675333	134675357	protein_coding	Srcap	exon	ENSMUSG00000053877	ProperStrand	69	chr16	23111392	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	5	-6.5985
chr16	50192678	50192695	protein_coding	Bbx	utr3	ENSMUSG00000022641	ProperStrand	18	chr11	69483136	69483190	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.6750
chr7	28012841	28012921	protein_coding	Itpkc	exon	ENSMUSG00000003752	ProperStrand	10	chr9	61260305	61260735	protein_coding	Tle3	exon	ENSMUSG00000032280	ProperStrand	88	1	-16.1973
chr9	75425220	75425310	protein_coding	Tmod2	intron	ENSMUSG00000032186	NonProperStrand	2	chr1	63968032	63968121	pseudogene	Gm13754	.	ENSMUSG00000082373	NonProperStrand	2	1	-inf
chr9	15130707	15130779	snoRNA	ENSMUSG00000077506_Scarna9	.	ENSMUSG00000077506	ProperStrand	148	chr7	29136554	29136654	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.0146
chr10	79756524	79756614	protein_coding	Rps15	exon	ENSMUSG00000063457	ProperStrand	119	chr18	35716729	35716809	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.1439
chr13	73928226	73930069	protein_coding	Slc12a7	exon	ENSMUSG00000017756	ProperStrand	80	chr17	36000485	36000501	protein_coding	Nrm	exon	ENSMUSG00000059791	ProperStrand	253	1	-9.8505
chr5	101097293	101097364	protein_coding	Coq2	intron	ENSMUSG00000029319	ProperStrand	5	chr8	74008400	74008417	protein_coding	Ano8	exon	ENSMUSG00000034863	NonProperStrand	171	1	-16.3093
chr3	104667449	104667465	protein_coding	St7l	utr5	ENSMUSG00000045576	ProperStrand	19	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-5.8137
chrX	34622991	34623037	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	chr13	23409369	23409408	tRNA	tRNA99-MetCAT	.	33154	ProperStrand	4	1	-8.6590
chr2	158182245	158182299	lincRNA	9430008C03Rik	intron	ENSMUSG00000085385	ProperStrand	1039	chr15	71624772	71624798	snoRNA	ENSMUSG00000088895_SNORA81	.	ENSMUSG00000088895	ProperStrand	348	3	-10.0837
chr18	60936155	60936633	protein_coding	Rps14	exon	ENSMUSG00000024608	ProperStrand	154	chr5	107117751	107117768	protein_coding	Zfp644	intron	ENSMUSG00000049606	ProperStrand	35	1	-12.5107
chr4	116202385	116203039	protein_coding	Ipp	exon	ENSMUSG00000028696	ProperStrand	17	chr9	120037992	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	8	-22.1397
chr1	137931111	137931179	protein_coding	Tmem9	utr3	ENSMUSG00000026411	ProperStrand	14	chr11	68886928	68887018	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-7.0150
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr13	49779667	49779729	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-1.2430
chr7	52381973	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	chr11	106362568	106362638	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	4	-5.7291
chr5	65615098	65615992	protein_coding	Wdr19	exon	ENSMUSG00000037890	ProperStrand	71	chr2	26494720	26494800	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.8075
chr8	72334599	72334615	protein_coding	Gmip	exon	ENSMUSG00000036246	ProperStrand	102	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.0181
chr18	39001567	39001584	protein_coding	Fgf1	utr3	ENSMUSG00000036585	ProperStrand	14	chr16	23111374	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.7143
chr9	61220316	61220371	protein_coding	Tle3	utr5	ENSMUSG00000032280	ProperStrand	88	chr10	6063958	6063976	protein_coding	Akap12	intron	ENSMUSG00000038587	ProperStrand	1008	1	-6.9139
chr7	118224456	118224472	protein_coding	Eif4g2	exon	ENSMUSG00000005610	ProperStrand	134	chr8	98269956	98269973	protein_coding	Cnot1	intron	ENSMUSG00000036550	ProperStrand	315	1	-8.3820
chr11	106114310	106114476	protein_coding	Ftsj3	exon	ENSMUSG00000020706	ProperStrand	64	chr2	26494747	26494837	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-5.1749
chr4	117811168	117819614	protein_coding	Kdm4a	exon	ENSMUSG00000033326	ProperStrand	81	chr7	29136554	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-3.4176
chr2	118271992	118272010	protein_coding	Eif2ak4	exon	ENSMUSG00000005102	NonProperStrand	4	chr11	106874216	106874253	tRNA	tRNA945-ArgCCG	.	1753768	ProperStrand	133	1	-17.2929
chr8	60234858	60234958	LINE	Lx5	L1	chr8Lx560233898	ProperStrand	1	chr1	88247742	88247777	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-inf
chr2	59146401	59146481	protein_coding	Pkp4	exon	ENSMUSG00000026991	ProperStrand	33	chr12	106269283	106269373	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-5.2932
chr7	125880424	125880440	protein_coding	6330503K22Rik	utr3	ENSMUSG00000033904	NonProperStrand	4	chr15	82980101	82980149	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-12.8024
chr13	34975338	34975354	protein_coding	Prpf4b	exon	ENSMUSG00000021413	ProperStrand	50	chr1	162968442	162968505	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	3	-14.7255
chr1	33828651	33828669	protein_coding	Zfp451	intron	ENSMUSG00000042197	NonProperStrand	393	chr5	108336363	108336408	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-2.9109
chrX	148362882	148362927	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	chr3	152450610	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	1	-4.6304
chr14	64112768	64112802	protein_coding	Tdh	exon	ENSMUSG00000021953	ProperStrand	67	chr9	15118322	15118371	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.2651
chr7	134986031	134986048	protein_coding	Stx4a	exon	ENSMUSG00000030805	NonProperStrand	11	chr16	23111450	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.1830
chr3	107845319	107846310	protein_coding	Gstm4	exon	ENSMUSG00000027890	ProperStrand	4	chr10	23505173	23505253	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-6.2798
chr4	140881161	140881251	protein_coding	Epha2	intron	ENSMUSG00000006445	ProperStrand	148	chr15	98356821	98356901	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	2	-9.6959
chr4	143027927	143028559	protein_coding	Oog4	exon	ENSMUSG00000047799	NonProperStrand	99	chr17	39985623	39985666	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-4.9563
chr5	115597697	115597728	protein_coding	Mlec	utr3	ENSMUSG00000048578	ProperStrand	47	chr4	131908689	131908754	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.5727
chr7	133939228	133939264	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	chr14	49092131	49092148	protein_coding	6720456H20Rik	exon	ENSMUSG00000036339	ProperStrand	28	1	-9.8764
chr19	9047121	9047404	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	chr7	67123692	67123753	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	1	-5.7276
chr11	118269346	118270047	protein_coding	Cant1	exon	ENSMUSG00000025575	ProperStrand	22	chr1	155287326	155287354	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	1	-11.0086
chr17	45738612	45738760	protein_coding	Gm7325	exon	ENSMUSG00000079471	ProperStrand	9	chr1	162965994	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-11.9671
chr6	92104375	92104391	protein_coding	Nr2c2	exon	ENSMUSG00000005893	ProperStrand	101	chr9	104081240	104081291	protein_coding	Dnajc13	exon	ENSMUSG00000032560	ProperStrand	60	1	-12.2682
chr6	28834968	28835066	protein_coding	Snd1	exon	ENSMUSG00000001424	ProperStrand	210	chr11	48616664	48616706	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	1	-6.8510
chr13	9833552	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr13	3885978	3886011	protein_coding	Net1	exon	ENSMUSG00000021215	ProperStrand	32	1	-6.1881
chr8	126108519	126108542	rRNA	n-R5s127	.	ENSMUSG00000075856	ProperStrand	7	chr11	97642952	97643047	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-15.7712
chr2	71664826	71664845	protein_coding	Itga6	exon	ENSMUSG00000027111	ProperStrand	54	chr7	116664823	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-4.7759
chr17	37386206	37386286	processed_transcript	Gm20429	.	ENSMUSG00000092591	NonProperStrand	1	chr18	53517651	53517741	protein_coding	Snx24	intron	ENSMUSG00000024535	NonProperStrand	14	1	-inf
chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	chr17	35089182	35089232	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-2.2221
chr1	187193542	187194770	protein_coding	Eprs	exon	ENSMUSG00000026615	ProperStrand	149	chr10	110918526	110918616	protein_coding	Nap1l1	intron	ENSMUSG00000058799	ProperStrand	185	1	-9.2308
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr17	30772308	30772324	protein_coding	Dnahc8	utr5	ENSMUSG00000033826	ProperStrand	246	1	-5.7985
chr1	138178661	138178677	protein_coding	Camsap2	exon	ENSMUSG00000041570	NonProperStrand	116	chr15	79908997	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-4.2046
chr17	13112509	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	chr7	16524137	16524177	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	1	-1.4610
chr11	102927671	102927693	protein_coding	Nmt1	utr3	ENSMUSG00000020936	ProperStrand	43	chr11	119572423	119572440	protein_coding	Rptor	intron	ENSMUSG00000025583	NonProperStrand	13	1	-17.1946
chr7	4945735	4945751	protein_coding	Zfp579	exon	ENSMUSG00000051550	ProperStrand	13	chr9	15119632	15119712	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.5260
chr1	59539683	59541557	protein_coding	Fzd7	utr5	ENSMUSG00000041075	ProperStrand	373	chr9	120038467	120038662	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-0.9976
chr7	52713415	52713479	protein_coding	Ftl1	utr3	ENSMUSG00000050708	ProperStrand	807	chr1	192712615	192712631	protein_coding	Rps6kc1	exon	ENSMUSG00000089872	ProperStrand	241	1	-5.3728
chr12	88533998	88534035	protein_coding	Tmed8	intron	ENSMUSG00000034111	ProperStrand	22	chr16	23111770	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-6.2517
chr9	31293420	31293437	LTR	RLTR23	ERV1	chr9RLTR2331293207	NonProperStrand	1	chr17	35971930	35971955	protein_coding	Tubb5	exon	ENSMUSG00000001525	ProperStrand	624	1	-inf
chr18	44988692	44988782	protein_coding	Ythdc2	intron	ENSMUSG00000034653	ProperStrand	9	chr7	109162956	109163036	protein_coding	Numa1	utr3	ENSMUSG00000066306	ProperStrand	148	1	-15.3604
chr14	55476645	55476661	protein_coding	Homez	exon	ENSMUSG00000057156	NonProperStrand	127	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.7590
chr4	133145721	133147252	protein_coding	Gpn2	exon	ENSMUSG00000028848	ProperStrand	6	chr2	26493366	26493421	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-8.3724
chr13	105384616	105384639	LINE	L1MB5	L1	chr13L1MB5105384608	ProperStrand	3	chr10	23505190	23505268	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-inf
chr2	119465317	119465407	protein_coding	Nusap1	exon	ENSMUSG00000027306	ProperStrand	11	chr15	88612311	88612391	protein_coding	Zbed4	exon	ENSMUSG00000034333	ProperStrand	19	1	-18.7445
chr11	62416575	62416595	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr9	120037979	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	6	-8.1150
chr11	115560547	115560592	protein_coding	Grb2	utr5	ENSMUSG00000059923	ProperStrand	12	chr15	34370545	34370582	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-6.6995
chr11	77926249	77926355	protein_coding	BC017647	intron	ENSMUSG00000037750	ProperStrand	19	chr7	116664817	116664868	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-7.8186
chr19	24176217	24176236	protein_coding	Tjp2	intron	ENSMUSG00000024812	ProperStrand	63	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.6928
chr11	80707576	80707593	protein_coding	Accn1	exon	ENSMUSG00000020704	ProperStrand	69	chr4	131908813	131908896	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-6.4687
chr2	159221908	159221924	LTR	RLTR13C2	ERVK	chr2RLTR13C2159221819	NonProperStrand	2	chr16	23111384	23111480	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-8.0851
chr7	29053196	29053213	protein_coding	Eid2	exon	ENSMUSG00000046058	ProperStrand	4	chr15	79908930	79909017	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-11.1005
chr12	112908101	112908191	protein_coding	Ckb	exon	ENSMUSG00000001270	ProperStrand	28	chr14	76247731	76247811	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-5.6497
chr3	157729109	157729125	protein_coding	Lrrc40	exon	ENSMUSG00000063052	NonProperStrand	26	chr16	23110898	23110918	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.2392
chr11	52197364	52197429	protein_coding	Vdac1	exon	ENSMUSG00000020402	ProperStrand	107	chr2	170322357	170322374	protein_coding	Pfdn4	intron	ENSMUSG00000052033	ProperStrand	55	1	-12.3271
chrX	162843969	162843986	protein_coding	Ofd1	exon	ENSMUSG00000040586	NonProperStrand	11	chr2	26493391	26493449	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-7.0863
chr10	77429767	77429783	protein_coding	Trpm2	utr5	ENSMUSG00000009292	ProperStrand	4	chr9	15119287	15119358	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-10.7245
chr17	66468411	66468427	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	chr4	56910496	56910617	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-2.8492
chr9	114878798	114878888	SINE	B4A	B4	chr9B4A114878648	NonProperStrand	1	chr9	114879012	114879092	SINE	PB1D10	Alu	chr9PB1D10114879035	NonProperStrand	1	1	-inf
chr4	79648851	79648873	pseudogene	Gm11407	.	ENSMUSG00000082179	NonProperStrand	20	chr4	131908806	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	7	-19.7418
mmu-miR-6240	3	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr19	46079316	46079332	protein_coding	Hps6	exon	ENSMUSG00000074811	ProperStrand	56	1	-6.0394
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr4	146706327	146706411	lincRNA	Gm17317	intron	ENSMUSG00000091833	ProperStrand	8	1	-12.4484
chr1	71656230	71667370	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr7	118219574	118219642	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	5	-2.5794
chrX	34623005	34623036	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	NonProperStrand	26	chr7	29136557	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	NonProperStrand	27	1	-16.6084
chr9	106561501	106561591	protein_coding	Tex264	exon	ENSMUSG00000040813	ProperStrand	18	chr12	55835604	55835684	snRNA	ENSMUSG00000075960_U1	.	ENSMUSG00000075960	ProperStrand	210	1	-13.2452
chr16	37777391	37777408	protein_coding	Fstl1	exon	ENSMUSG00000022816	ProperStrand	179	chr5	130295413	130295487	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	2	-5.4681
mmu-miR-6240	2	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	1	-1.8285
chr1	182682324	182682384	protein_coding	Acbd3	exon	ENSMUSG00000026499	ProperStrand	67	chr11	69483136	69483189	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.2638
chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	chr18	75161557	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-2.3610
chr13	23844660	23844707	protein_coding	Hist1h3b	utr3	ENSMUSG00000069267	ProperStrand	25	chr2	26494710	26494802	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	7	-18.9664
chr4	41068058	41068103	protein_coding	Nol6	exon	ENSMUSG00000028430	ProperStrand	98	chr7	117166824	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-3.8840
chr1	75025618	75025637	protein_coding	Nhej1	intron	ENSMUSG00000026162	ProperStrand	5	chr19	8800355	8800449	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	3	-19.3459
chr1	154684901	154684931	protein_coding	Smg7	utr3	ENSMUSG00000042772	ProperStrand	88	chr15	79913301	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-5.0255
chrX	160471063	160471083	LTR	ORR1D1	MaLR	chrXORR1D1160470965	ProperStrand	3	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	1	-13.3845
chr7	53450891	53450907	protein_coding	Ush1c	utr3	ENSMUSG00000030838	ProperStrand	5	chr5	130300460	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-7.4021
chr9	78023108	78023178	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr9	24549602	24549631	protein_coding	Tbx20	intron	ENSMUSG00000031965	NonProperStrand	110	2	-7.7817
chr18	35716702	35716883	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	chr1	145626056	145626195	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	18	-12.4528
chr3	90197173	90197671	protein_coding	Ints3	exon	ENSMUSG00000027933	ProperStrand	87	chr11	102294589	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	1	-8.1502
chr11	87240290	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	chr16	23110456	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	6	-6.8791
chr7	52678155	52679516	protein_coding	Ruvbl2	exon	ENSMUSG00000003868	ProperStrand	41	chr17	13112490	13112570	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-5.3175
chr11	95242146	95242249	protein_coding	Fam117a	exon	ENSMUSG00000038893	ProperStrand	18	chr16	23111464	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.2408
chr1	162965328	162965419	non_coding	Gas5	.	ENSMUSG00000053332	ProperStrand	144	chr1	89673604	89673684	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	8	-16.3712
chr13	23844577	23844667	protein_coding	Hist1h3b	utr3	ENSMUSG00000069267	ProperStrand	25	chr13	23837050	23837130	protein_coding	Hist1h3c	exon	ENSMUSG00000069310	ProperStrand	26	4	-19.2852
chr1	173531241	173531257	protein_coding	Ly9	exon	ENSMUSG00000004707	ProperStrand	7	chr14	33005085	33005139	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-8.3069
chr4	43505798	43505860	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr8	74008400	74008417	protein_coding	Ano8	exon	ENSMUSG00000034863	NonProperStrand	171	1	-1.3642
chr11	102294588	102294610	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr1	185857228	185857244	protein_coding	1700056E22Rik	exon	ENSMUSG00000044854	ProperStrand	173	1	-6.7856
chr6	121423179	121423195	protein_coding	Iqsec3	utr5	ENSMUSG00000040797	NonProperStrand	139	chr2	26494709	26494760	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.6984
chr2	121949508	121949526	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	chr15	72376666	72376682	protein_coding	Kcnk9	exon	ENSMUSG00000036760	NonProperStrand	42	1	-11.0171
chr9	118467726	118467816	protein_coding	Golga4	exon	ENSMUSG00000038708	ProperStrand	95	chr4	131908266	131908346	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.8219
chr8	74432512	74432529	protein_coding	Zfp882	utr5	ENSMUSG00000089857	NonProperStrand	12	chr16	23110828	23110940	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-4.4633
chr6	121339007	121339025	protein_coding	Iqsec3	intron	ENSMUSG00000040797	ProperStrand	3	chr4	131908817	131908871	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-6.9471
chr18	36961606	36961661	misc_RNA	Vault	.	ENSMUSG00000065145	ProperStrand	177	chr11	32620574	32622070	protein_coding	Fbxw11	exon	ENSMUSG00000020271	ProperStrand	36	1	-12.1746
chr9	63868722	63868739	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	chr10	110918591	110918672	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	4	-1.7376
chr4	144794823	144794840	SINE	RSINE1	B4	chr4RSINE1144794714	ProperStrand	2	chrX	84483703	84483751	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-15.7471
chr14	55088370	55088460	protein_coding	Lrp10	exon	ENSMUSG00000022175	ProperStrand	19	chr16	23110920	23111000	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7016
chr9	57385425	57385441	protein_coding	2310046O06Rik	utr5	ENSMUSG00000032305	ProperStrand	135	chr5	140919028	140919101	protein_coding	Eif3b	utr3	ENSMUSG00000056076	ProperStrand	66	1	-11.4939
chr16	16323855	16324068	protein_coding	Dnm1l	exon	ENSMUSG00000022789	NonProperStrand	38	chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	1	-10.1944
chr2	90235293	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	3568023	3568039	protein_coding	C330021F23Rik	utr5	ENSMUSG00000065952	NonProperStrand	85	2	-6.4213
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	3	-7.3088
chr7	74832292	74832321	protein_coding	Ttc23	intron	ENSMUSG00000030555	ProperStrand	11	chr5	130300445	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-5.7288
chr4	53061929	53061971	protein_coding	Abca1	exon	ENSMUSG00000015243	ProperStrand	15	chr7	118219573	118219618	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-11.2013
chr18	80403700	80403717	protein_coding	Txnl4a	utr5	ENSMUSG00000057130	ProperStrand	44	chr1	162968442	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-6.6932
chr7	20282314	20282361	protein_coding	Apoe	exon	ENSMUSG00000002985	ProperStrand	231	chr1	9932550	9932621	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	8	-inf
chr9	123738285	123738385	protein_coding	Fyco1	exon	ENSMUSG00000025241	ProperStrand	31	chr9	64744916	64744934	protein_coding	Dennd4a	exon	ENSMUSG00000053641	ProperStrand	537	8	-21.4127
chr8	73891579	73891633	protein_coding-noncoding	Use1	utr5	ENSMUSG00000002395	ProperStrand	8	chr9	39358287	39358304	protein_coding	Olfr958	exon	ENSMUSG00000050853	NonProperStrand	266	2	-20.3203
chr18	73693166	73693188	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr12	55797769	55797869	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	6	-6.8428
chr14	56281386	56281403	protein_coding	Nedd8	exon	ENSMUSG00000010376	ProperStrand	27	chr19	8799581	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-8.3666
chr4	137509675	137509692	protein_coding	Ece1	intron	ENSMUSG00000057530	NonProperStrand	5	chr2	26494802	26494826	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-8.0805
chr7	97605640	97605656	protein_coding	Tmem126a	utr5	ENSMUSG00000030615	ProperStrand	22	chr9	15119631	15119684	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.4840
chr12	88488443	88496424	protein_coding	Pomt2	exon	ENSMUSG00000034126	NonProperStrand	331	chr10	90584688	90584724	protein_coding	Slc25a3	exon	ENSMUSG00000061904	ProperStrand	74	1	-9.4704
chr7	24779190	24779213	SINE	ID_B1	B4	chr7ID_B124779183	NonProperStrand	54	chr2	135360025	135360043	antisense	9630028H03Rik	.	ENSMUSG00000085631	NonProperStrand	22	2	-22.5693
chr7	57069070	57069103	protein_coding	Prmt3	intron	ENSMUSG00000030505	ProperStrand	89	chr3	108357255	108357355	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-3.7951
chr4	147968436	147968490	protein_coding	Srm	utr3	ENSMUSG00000006442	ProperStrand	19	chr16	23110549	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.5826
chrX	141123817	141123834	protein_coding	Zcchc16	intron	ENSMUSG00000071679	NonProperStrand	2	chr16	23111447	23111503	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-8.0851
chr8	107165492	107165508	protein_coding	Fam96b	exon	ENSMUSG00000031879	ProperStrand	21	chr10	110931307	110931328	protein_coding	Nap1l1	exon	ENSMUSG00000058799	ProperStrand	185	1	-13.1821
chr5	121215205	121215224	protein_coding	Oas3	intron	ENSMUSG00000032661	ProperStrand	8	chr5	121655016	121655064	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-7.7589
chr5	122580412	122584741	protein_coding	Ccdc63	utr5	ENSMUSG00000043036	ProperStrand	120	chr15	79908960	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-4.1406
chr9	58373416	58373437	protein_coding	Cd276	utr3	ENSMUSG00000035914	ProperStrand	19	chr16	23111430	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-5.4620
chr13	112493869	112493969	protein_coding	Mier3	exon	ENSMUSG00000032727	ProperStrand	11	chr5	130300534	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-5.7288
chr14	25312670	25315018	protein_coding	Rps24	exon	ENSMUSG00000025290	ProperStrand	110	chr7	116663634	116663724	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.5396
chr3	101967195	101967223	protein_coding-noncoding	Vangl1	utr3	ENSMUSG00000027860	ProperStrand	2	chr3	123210910	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-inf
chr17	34047418	34047547	protein_coding	Daxx	exon	ENSMUSG00000002307	ProperStrand	26	chr3	123210854	123210885	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-8.8817
chr16	16889659	16890259	protein_coding	Top3b	exon	ENSMUSG00000022779	ProperStrand	36	chr5	130295515	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-6.2531
chr13	49218439	49218455	protein_coding	Wnk2	intron	ENSMUSG00000037989	NonProperStrand	67	chr11	69483212	69483269	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.2638
chr9	61761743	61762227	protein_coding	Rplp1	exon	ENSMUSG00000007892	ProperStrand	116	chr1	88247792	88247872	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-3.8413
chr7	95266597	95266613	protein_coding	Grm5	intron	ENSMUSG00000049583	NonProperStrand	145	chr7	116663653	116663708	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.1527
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr5	74489543	74489676	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	3	-0.8386
chr18	63724539	63724629	LINE	L1Md_F2	L1	chr18L1Md_F263720180	NonProperStrand	1	chr18	63724948	63725028	LINE	L1_Mus1	L1	chr18L1_Mus163724879	NonProperStrand	1	1	-inf
chr10	20656987	20657077	LTR	MLT1A1	MaLR	chr10MLT1A120656941	NonProperStrand	1	chr10	20656781	20656861	LTR	MLT2B4	ERVL	chr10MLT2B420656750	ProperStrand	1	1	-inf
chr10	83058688	83058788	protein_coding	A230046K03Rik	utr3	ENSMUSG00000034560	ProperStrand	41	chr11	48616643	48616706	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	1	-10.1130
chr11	100953328	100953347	protein_coding	Psmc3ip	utr3	ENSMUSG00000019303	ProperStrand	4	chr13	3917312	3917392	protein_coding	Net1	utr5	ENSMUSG00000021215	ProperStrand	32	4	-inf
chr1	173936317	173936333	protein_coding	Vangl2	exon	ENSMUSG00000026556	ProperStrand	37	chr2	37502726	37502742	protein_coding	Strbp	utr5	ENSMUSG00000026915	ProperStrand	90	1	-13.4743
chr8	121934743	121934779	protein_coding	Mlycd	utr3	ENSMUSG00000074064	ProperStrand	6	chr18	33954838	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-8.1162
chr8	114061388	114061454	protein_coding	Znrf1	exon	ENSMUSG00000033545	ProperStrand	13	chr3	108228259	108228275	protein_coding	Sars	utr3	ENSMUSG00000068739	NonProperStrand	200	1	-14.0171
chr14	33277503	33277520	protein_coding	Chat	intron	ENSMUSG00000021919	ProperStrand	3	chr13	49779746	49779803	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-13.3668
chr8	87211391	87211471	protein_coding	Nacc1	intron	ENSMUSG00000001910	ProperStrand	130	chr17	24857763	24857853	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.1288
chr18	34477815	34477857	protein_coding	Apc	exon	ENSMUSG00000005871	ProperStrand	64	chr19	8963027	8963080	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-5.8909
chr2	172695255	172695308	protein_coding	Bmp7	utr3	ENSMUSG00000008999	ProperStrand	22	chr9	15119667	15119767	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.4840
chr6	115757991	115758122	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr11	55296275	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	3	-0.8065
chr5	73448720	73448736	protein_coding	Fryl	intron	ENSMUSG00000070733	NonProperStrand	10	chr5	130300461	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-14.0681
chr5	140857296	140857313	protein_coding	Snx8	intron	ENSMUSG00000029560	ProperStrand	106	chr7	116663710	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.5945
chr7	134620057	134620074	protein_coding	Prr14	exon	ENSMUSG00000030822	NonProperStrand	5	chr18	35716778	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-6.9999
chr13	39052372	39052388	protein_coding	Slc35b3	utr5	ENSMUSG00000021432	ProperStrand	27	chr4	131908693	131908748	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.4692
chr17	71198048	71198148	protein_coding	Tgif1	intron	ENSMUSG00000047407	ProperStrand	64	chr11	62416600	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-5.0411
chr5	135888563	135892851	protein_coding	Hip1	utr3	ENSMUSG00000039959	ProperStrand	30	chr11	77995188	77995219	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-7.5641
chr11	57942283	57942371	protein_coding	Gemin5	exon	ENSMUSG00000037275	ProperStrand	33	chr8	39436369	39436386	protein_coding	Sgcz	intron	ENSMUSG00000039539	ProperStrand	46	1	-15.0483
chr17	45705269	45705324	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr19	8963032	8963048	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-3.6919
chr8	125605688	125605713	protein_coding	Spg7	intron	ENSMUSG00000000738	ProperStrand	40	chr11	97642952	97643047	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.1871
chr13	54186688	54187795	protein_coding	Sfxn1	exon	ENSMUSG00000021474	ProperStrand	18	chr18	35714194	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	4	-17.8504
chr17	27769208	27769251	protein_coding-noncoding	Rps10	utr3	ENSMUSG00000052146	ProperStrand	3	chr8	93565011	93565027	protein_coding	Chd9	exon	ENSMUSG00000056608	ProperStrand	35	1	-inf
chr18	12414702	12414781	protein_coding	Ankrd29	intron	ENSMUSG00000057766	NonProperStrand	2	chr16	23110886	23110977	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr1	138178661	138178677	protein_coding	Camsap2	exon	ENSMUSG00000041570	NonProperStrand	116	chr6	124665483	124665523	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	1	-5.6352
chr11	98200362	98200388	Low_complexity	GC_rich	Low_complexity	chr11GC_rich98200242	ProperStrand	2	chr3	85448965	85456213	protein_coding	Pet112l	exon	ENSMUSG00000028085	ProperStrand	81	1	-inf
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr9	108729998	108730015	protein_coding	Celsr3	exon	ENSMUSG00000023473	NonProperStrand	5	1	-12.9514
chr6	48365721	48365821	protein_coding	Krba1	exon	ENSMUSG00000042810	ProperStrand	7	chr10	110918661	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-7.7211
chr19	41990217	41990248	protein_coding	Pgam1	exon	ENSMUSG00000011752	ProperStrand	124	chr10	41559737	41559754	protein_coding	Sesn1	intron	ENSMUSG00000038332	ProperStrand	7	2	-inf
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr6	131330341	131330412	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	ProperStrand	408	1	-6.6099
chr10	75762672	75762706	protein_coding	Dip2a	exon	ENSMUSG00000020231	ProperStrand	25	chr4	131908236	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-4.9856
chr11	83254019	83254035	protein_coding	1700020L24Rik	exon	ENSMUSG00000035085	NonProperStrand	88	chr7	116663693	116663759	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.8803
chr8	112075496	112075995	protein_coding	Dhx38	exon	ENSMUSG00000037993	ProperStrand	27	chr4	131865856	131865936	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.1241
chr9	114326124	114326214	protein_coding	Glb1	exon	ENSMUSG00000045594	ProperStrand	67	chr11	62416574	62416622	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-4.9525
chr9	99001613	99001680	protein_coding	Pik3cb	exon	ENSMUSG00000032462	ProperStrand	48	chr15	103074131	103074409	protein_coding	Hnrnpa1	exon	ENSMUSG00000046434	ProperStrand	68	1	-13.5106
chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-3.2000
chr10	62869940	62871022	protein_coding	Dnajc12	exon	ENSMUSG00000036764	ProperStrand	4	chr2	22444873	22444895	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-13.4435
chr11	71753123	71753140	lincRNA	4930401O10Rik	exon	ENSMUSG00000085528	NonProperStrand	3	chr4	131908397	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-7.2242
mmu-miR-3473b	0	16	miRNA	mmu-miR-3473b	.	mmu-miR-3473b	ProperStrand	33	chr4	131865855	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.7641
chr9	30871866	30871898	protein_coding	Zbtb44	exon	ENSMUSG00000047412	ProperStrand	68	chr7	17150254	17150354	protein_coding	Grlf1	exon	ENSMUSG00000058230	ProperStrand	38	1	-13.9833
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr17	39985305	39985328	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-1.8513
chr7	29104068	29113771	protein_coding	Supt5h	exon	ENSMUSG00000003435	ProperStrand	123	chr16	23111398	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-1.0033
chr4	132824344	132824364	protein_coding	Tmem222	exon	ENSMUSG00000028857	ProperStrand	8	chr7	116664822	116664922	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-6.4335
chr4	116862586	116862662	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	chr8	73419657	73419783	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	7	-4.2865
chr18	35744255	35744345	protein_coding	Matr3	exon	ENSMUSG00000037236	ProperStrand	90	chr19	8963085	8963166	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	9	-18.7309
chr7	106002470	106002486	protein_coding	Wnt11	utr3	ENSMUSG00000015957	NonProperStrand	1	chr2	135820134	135824418	protein_coding	Plcb4	exon	ENSMUSG00000039943	ProperStrand	50	1	-inf
chr7	112782969	112782985	protein_coding	Arfip2	utr3	ENSMUSG00000030881	ProperStrand	191	chr7	29136525	29136634	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-0.7174
chr3	157210608	157210708	protein_coding	Zranb2	utr3	ENSMUSG00000028180	ProperStrand	43	chr5	130300497	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-7.8999
chr1	37483536	37483559	protein_coding	6330578E17Rik	intron	ENSMUSG00000026112	ProperStrand	14	chr2	37502726	37502742	protein_coding	Strbp	utr5	ENSMUSG00000026915	ProperStrand	90	1	-15.4604
chr13	6613956	6613994	protein_coding	Pfkp	exon	ENSMUSG00000021196	ProperStrand	197	chr7	150717298	150717350	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-3.2575
chr13	103704111	103704133	protein_coding	Mast4	intron	ENSMUSG00000034751	NonProperStrand	12	chr16	23110828	23110869	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.4686
chr8	86782815	86784198	protein_coding	Ccdc130	exon	ENSMUSG00000004994	ProperStrand	29	chr5	136626294	136626338	protein_coding	Orai2	exon	ENSMUSG00000039747	ProperStrand	2	1	-inf
chr10	127522645	127527181	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr16	23111373	23111468	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	12	-1.2649
mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	3	-6.2499
chr9	114373315	114373332	protein_coding	Glb1	exon	ENSMUSG00000045594	NonProperStrand	7	chr17	24857717	24857847	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	4	-20.0447
chr19	5417721	5417737	protein_coding-noncoding	4930481A15Rik	utr5	ENSMUSG00000086938	ProperStrand	3	chr5	121582180	121582225	protein_coding	Ptpn11	utr3	ENSMUSG00000043733	ProperStrand	25	1	-inf
chr5	99372453	99372470	protein_coding	Prkg2	exon	ENSMUSG00000029334	ProperStrand	22	chr7	117190016	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-5.2455
chr12	9581533	9585901	protein_coding	Osr1	utr5	ENSMUSG00000048387	ProperStrand	1	chr8	73419683	73419738	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-inf
chr4	132618844	132618940	protein_coding	Ahdc1	exon	ENSMUSG00000037692	ProperStrand	100	chr11	97642952	97642975	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.6468
chr16	32906162	32907163	protein_coding	Fyttd1	utr3	ENSMUSG00000022800	ProperStrand	31	chr4	131908685	131908891	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-4.0157
chr3	69379705	69379805	protein_coding	B3galnt1	exon	ENSMUSG00000043300	ProperStrand	3	chr11	68887042	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-10.4040
chr8	13466832	13466848	protein_coding	Gas6	exon	ENSMUSG00000031451	ProperStrand	27	chr11	106362304	106362340	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-7.4316
chrX	100767009	100767025	non_coding	B230206F22Rik	.	ENSMUSG00000086370	NonProperStrand	20	chr1	162965980	162965998	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-5.7229
chr14	65035748	65035765	protein_coding	Msra	intron	ENSMUSG00000054733	ProperStrand	15	chr11	74718931	74718975	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	1	-11.8424
chr18	63908609	63908625	protein_coding	Wdr7	intron	ENSMUSG00000040560	NonProperStrand	180	chr19	11857619	11859888	protein_coding	Stx3	exon	ENSMUSG00000041488	ProperStrand	37	1	-12.0852
chr6	142449928	142453940	protein_coding	Ldhb	exon	ENSMUSG00000030246	ProperStrand	224	chr7	109239071	109239087	protein_coding	Trpc2	exon	ENSMUSG00000070425	NonProperStrand	26	1	-12.3641
chr2	164597358	164597403	protein_coding	Ube2c	exon	ENSMUSG00000001403	ProperStrand	40	chr4	134479844	134479860	protein_coding	D4Wsu53e	exon	ENSMUSG00000037266	NonProperStrand	50	1	-14.4983
chr1	38593790	38683948	protein_coding	Aff3	exon	ENSMUSG00000037138	NonProperStrand	11	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-12.8327
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chrX	103398934	103398995	protein_coding	Pgk1	utr3	ENSMUSG00000062070	ProperStrand	484	1	-2.0625
chr11	8389103	8389129	protein_coding	Tns3	intron	ENSMUSG00000020422	ProperStrand	81	chr2	166890780	166890834	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	3	-19.7391
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr10	43723884	43723902	protein_coding	Aim1	utr5	ENSMUSG00000019866	ProperStrand	19	1	-10.1190
chr7	75507227	75507291	lincRNA	Fam169b	exon	ENSMUSG00000074071	ProperStrand	4	chr17	21697375	21697392	protein_coding	Zfp52	exon	ENSMUSG00000051341	ProperStrand	3	1	-inf
chr7	78146255	78146272	DNA	MER5A	MER1_type	chr7MER5A78146165	ProperStrand	1	chr11	69481362	69481462	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-inf
chr3	130431762	130433179	protein_coding	Rpl34	exon	ENSMUSG00000062006	ProperStrand	51	chr5	108336390	108336495	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	3	-12.2068
chr14	71165860	71165877	protein_coding-noncoding	Dok2	utr5	ENSMUSG00000022102	ProperStrand	5	chr8	73118825	73118880	protein_coding	Isyna1	exon	ENSMUSG00000019139	ProperStrand	15	1	-20.1544
chr5	100855902	100855948	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr17	26350653	26350822	protein_coding	Itfg3	exon	ENSMUSG00000024187	ProperStrand	30	1	-8.0238
chr2	90235294	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	146684406	146684425	protein_coding	Inpp5a	intron	ENSMUSG00000025477	ProperStrand	166	2	-4.5565
chr15	81110991	81111009	SINE	ID4	ID	chr15ID481110956	ProperStrand	272	chr7	85988636	85988683	protein_coding	Det1	exon	ENSMUSG00000030610	ProperStrand	4	1	-15.9439
chr8	113680655	113680700	protein_coding	Glg1	utr3	ENSMUSG00000003316	ProperStrand	83	chr11	97641496	97641586	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	1	-7.2102
chr1	12838498	12840844	protein_coding	Sulf1	exon	ENSMUSG00000016918	ProperStrand	22	chr6	83111671	83111687	protein_coding	1700003E16Rik	exon	ENSMUSG00000030030	ProperStrand	352	1	-11.8004
chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	chr2	26493424	26493492	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-0.9427
chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	chr7	29136525	29136612	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-0.7454
chr2	90235315	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	3292938	3309067	protein_coding	Limk2	exon	ENSMUSG00000020451	ProperStrand	100	1	-3.5047
chr11	119990517	119990576	protein_coding	Slc38a10	exon	ENSMUSG00000061306	ProperStrand	91	chr7	29136545	29136635	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.6941
chr7	149562430	149562492	protein_coding	Ctsd	utr3	ENSMUSG00000007891	ProperStrand	60	chr8	125418802	125418818	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	1	-9.6160
chr11	83775665	83775727	protein_coding	Ddx52	utr3	ENSMUSG00000020677	ProperStrand	9	chr19	25016725	25016793	snoRNA	ENSMUSG00000064896_SNORA19	.	ENSMUSG00000064896	ProperStrand	88	1	-16.3610
chr11	83037086	83037146	lincRNA	AI662270	exon	ENSMUSG00000087107	ProperStrand	1	chr16	23110941	23110966	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr3	96527940	96527956	protein_coding	Polr3c	exon	ENSMUSG00000028099	NonProperStrand	75	chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-7.2949
chr2	90235321	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	48616643	48616706	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	2	-2.1745
chr11	117864729	117864829	protein_coding	Pgs1	exon	ENSMUSG00000017715	ProperStrand	25	chr16	23111451	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.6475
chr4	116826700	116826763	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	chr1	89681249	89681349	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	7	-5.3370
chr5	12103843	12103933	LINE	Lx7	L1	chr5Lx712102956	ProperStrand	1	chr5	12104018	12104108	LINE	Lx7	L1	chr5Lx712104013	ProperStrand	1	1	-inf
chr8	72065329	72065419	DNA	URR1B	MER1_type	chr8URR1B72065333	ProperStrand	1	chr8	19977393	19977473	pseudogene	2610005L07Rik	.	ENSMUSG00000071793	ProperStrand	40	1	-inf
chr1	138031737	138031767	protein_coding	Kif21b	intron	ENSMUSG00000041642	ProperStrand	77	chr8	98269959	98270083	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-5.0561
chr4	137781871	137781961	protein_coding	Hp1bp3	exon	ENSMUSG00000028759	ProperStrand	21	chr3	88497853	88497933	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-9.5766
chr8	82271618	82271647	protein_coding	Anapc10	intron	ENSMUSG00000036977	ProperStrand	11	chr11	69481335	69481433	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-10.6406
chr4	122968588	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	chr2	144087323	144087375	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	3	-2.1120
chr7	31640257	31640273	protein_coding	Ffar3	exon	ENSMUSG00000019429	ProperStrand	3	chr9	120039897	120039997	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	1	-15.9290
chr6	47731683	47731723	misc_RNA	Y_RNA	.	ENSMUSG00000064945	ProperStrand	93	chr11	72790862	72791730	protein_coding	Atp2a3	exon	ENSMUSG00000020788	ProperStrand	29	2	-inf
chr1	163074414	163074481	protein_coding	Ankrd45	intron	ENSMUSG00000044835	ProperStrand	1	chr5	130300461	130300551	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-inf
chr7	4085274	4085292	protein_coding	Ttyh1	exon	ENSMUSG00000030428	ProperStrand	10	chr11	97643007	97643093	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-5.8808
chr1	179694088	179694178	protein_coding	Adss	utr3	ENSMUSG00000015961	ProperStrand	23	chr9	15119646	15119726	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	7	-19.3530
chr9	60719914	60719930	protein_coding	Uaca	exon	ENSMUSG00000034485	ProperStrand	109	chr16	23110527	23110564	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.5098
chr8	129468746	129468846	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	NonProperStrand	22	chr18	35716827	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	NonProperStrand	45	1	-15.9389
chr13	80063475	80063491	SINE	B1_Mm	Alu	chr13B1_Mm80063450	ProperStrand	8	chr15	78994730	78994746	protein_coding	Sox10	utr5	ENSMUSG00000033006	NonProperStrand	8	1	-18.6452
chr5	115939508	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr11	62416951	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	28	-18.8844
chr3	80799403	80799483	LINE	Lx3A	L1	chr3Lx3A80796945	NonProperStrand	1	chr2	170211517	170211607	protein_coding	Bcas1	intron	ENSMUSG00000013523	ProperStrand	15	1	-inf
chr2	32817599	32819304	protein_coding	Rpl12	exon	ENSMUSG00000038900	ProperStrand	167	chr16	23110828	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	10	-2.4729
chr14	19102912	19102955	protein_coding	Rpl15	exon	ENSMUSG00000012405	ProperStrand	145	chr1	132709788	132709804	protein_coding	Fcamr	exon	ENSMUSG00000026415	ProperStrand	8	1	-15.6630
chr16	41968906	41968923	protein_coding	Lsamp	intron	ENSMUSG00000061080	NonProperStrand	19	chr15	79908939	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	3	-17.5613
chrX	20240246	20245618	protein_coding	Uba1	exon	ENSMUSG00000001924	ProperStrand	156	chr13	56353448	56353465	protein_coding	Neurog1	utr5	ENSMUSG00000048904	ProperStrand	105	1	-10.2718
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr13	49779719	49779805	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-1.4627
chr15	31893156	31893174	LINE	L1_Mus4	L1	chr15L1_Mus431893081	ProperStrand	1	chr2	90235297	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	1	-inf
chr17	48005282	48005328	protein_coding	Foxp4	utr3	ENSMUSG00000023991	ProperStrand	27	chr11	69481342	69481432	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-4.7037
chr16	98173335	98173364	protein_coding	Zfp295	exon	ENSMUSG00000046962	ProperStrand	63	chr9	120039546	120039623	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.2300
chr10	101256313	101256331	protein_coding	Mgat4c	intron	ENSMUSG00000019888	ProperStrand	8	chr11	6428122	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-11.6954
chr9	121823892	121823908	protein_coding	Cyp8b1	exon	ENSMUSG00000050445	NonProperStrand	101	chr1	91358413	91358430	protein_coding	Agap1	intron	ENSMUSG00000055013	ProperStrand	229	1	-9.5824
chr4	108732688	108732707	protein_coding	Nrd1	exon	ENSMUSG00000053510	ProperStrand	76	chr17	35087895	35087951	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-4.7431
chrX	130620869	130620959	protein_coding	Cstf2	utr3	ENSMUSG00000031256	ProperStrand	26	chr11	69481345	69481425	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-4.7771
chr6	7635260	7635350	protein_coding	Asns	exon	ENSMUSG00000029752	ProperStrand	59	chr4	131865856	131865936	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.7940
chr8	125627843	125628958	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	chr1	88252836	88252860	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-4.0301
chr13	19216914	19217004	protein_coding	Amph	exon	ENSMUSG00000021314	ProperStrand	35	chr11	69481350	69481430	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-4.2039
chr7	148634701	148634828	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	chr8	113366286	113366308	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	1	-0.7185
chr17	32130219	32130319	protein_coding	Hsf2bp	intron	ENSMUSG00000002076	ProperStrand	17	chr16	23110965	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.8783
chrX	93136151	93136186	protein_coding	Las1l	exon	ENSMUSG00000057421	ProperStrand	248	chr5	149860294	149860358	protein_coding	Hmgb1	utr3	ENSMUSG00000066551	ProperStrand	99	1	-9.4632
chr12	86115807	86115823	protein_coding	Isca2	utr3	ENSMUSG00000021241	NonProperStrand	2	chr18	35716760	35716850	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-inf
chr2	150486092	150486129	protein_coding	Acss1	intron	ENSMUSG00000027452	ProperStrand	13	chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	1	-12.3024
chr5	66029855	66029871	protein_coding	Pds5a	exon	ENSMUSG00000029202	ProperStrand	62	chr7	117189958	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	6	-17.4083
chr17	68148340	68148387	protein_coding	Lama1	exon	ENSMUSG00000032796	ProperStrand	168	chr14	76372292	76372326	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	2	-11.1625
chr4	141658671	141658730	protein_coding	Kazn	utr3	ENSMUSG00000040606	ProperStrand	123	chr17	24857763	24857853	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.2022
chr1	132709788	132709804	protein_coding	Fcamr	exon	ENSMUSG00000026415	ProperStrand	8	chr18	73693122	73693148	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-9.6171
chr1	71632593	71632713	protein_coding	Fn1	utr3	ENSMUSG00000026193	ProperStrand	931	chr9	65436759	65436791	protein_coding	Pif1	intron	ENSMUSG00000041064	ProperStrand	14	4	-inf
chr7	54209739	54209756	protein_coding	Uevld	intron	ENSMUSG00000043262	ProperStrand	23	chr19	8800407	8800438	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-5.3675
chr11	87327496	87327546	protein_coding	Tex14	utr5	ENSMUSG00000010342	ProperStrand	41	chr7	149170855	149171340	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	1	-12.0164
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr12	82317769	82317785	protein_coding	Slc8a3	exon	ENSMUSG00000079055	ProperStrand	126	1	-7.1146
chr3	38354260	38354350	protein_coding	Ankrd50	exon	ENSMUSG00000044864	ProperStrand	36	chr10	107800720	107800800	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	1	-9.0968
chr17	69737986	69738002	protein_coding	Zfp161	utr3	ENSMUSG00000049672	NonProperStrand	45	chr6	71832616	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	2	-10.0359
chr16	32020237	32020327	protein_coding	Pak2	utr3	ENSMUSG00000022781	ProperStrand	7	chr6	115758017	115758097	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-9.8502
chr11	116713531	116713564	protein_coding	Srsf2	exon	ENSMUSG00000034120	ProperStrand	132	chr7	116663647	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.2795
chr10	79856738	79857333	protein_coding	Mbd3	exon	ENSMUSG00000035478	ProperStrand	27	chr2	145076805	145209253	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-9.3303
chr12	85350481	85350499	protein_coding	Acot1	utr5	ENSMUSG00000072949	NonProperStrand	2	chr8	73419679	73419779	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	NonProperStrand	53	1	-inf
chrX	7475732	7475956	protein_coding	Pqbp1	utr5	ENSMUSG00000031157	ProperStrand	22	chr19	8963033	8963113	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.0882
chr7	52381589	52381907	protein_coding	Rpl13a	exon	ENSMUSG00000074129	ProperStrand	269	chr18	33954817	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	3	-3.3795
chr19	18128622	18128639	SINE	B3	B2	chr19B318128551	NonProperStrand	24	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-7.0265
chr7	51828028	51828044	protein_coding	Napsa	exon	ENSMUSG00000002204	ProperStrand	88	chr12	29316526	29316581	protein_coding	Rps7	exon	ENSMUSG00000061477	ProperStrand	129	1	-11.0067
chr14	15572354	15572371	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr1	162966000	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-3.3793
chr7	86813774	86813864	protein_coding	5730590G19Rik	intron	ENSMUSG00000046591	ProperStrand	45	chr7	117189957	117190037	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.8650
chr7	136800631	136800649	SINE	RSINE1	B4	chr7RSINE1136800606	ProperStrand	216	chr3	75331511	75331536	protein_coding	Pdcd10	exon	ENSMUSG00000027835	ProperStrand	10	1	-14.4098
chr2	29786564	29786580	protein_coding	Odf2	utr3	ENSMUSG00000026790	NonProperStrand	6	chr4	131908753	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.3738
chr9	78046175	78047304	protein_coding	Gsta4	exon	ENSMUSG00000032348	ProperStrand	82	chr7	29136551	29136599	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.8552
chr4	116826699	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	chr19	8799829	8799897	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	4	-1.4340
chrX	160347488	160347504	protein_coding	Ap1s2	intron	ENSMUSG00000031367	ProperStrand	52	chr17	35299529	35299545	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-5.0540
chr17	83853888	83855467	protein_coding	Eml4	exon	ENSMUSG00000032624	ProperStrand	50	chr11	69483136	69483185	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	9	-inf
chr14	99698011	99698028	protein_coding	Klf5	utr5	ENSMUSG00000005148	ProperStrand	39	chr17	24665420	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-5.7824
chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	chr8	125731536	125731552	protein_coding	Gm20388	intron	ENSMUSG00000092329	ProperStrand	295	1	-7.5815
chr2	147009105	147009122	protein_coding	Nkx2-2	utr3	ENSMUSG00000027434	NonProperStrand	84	chr16	23111760	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.3953
chr3	85945711	85946474	protein_coding	Rps3a	exon	ENSMUSG00000028081	ProperStrand	177	chr9	24549572	24549629	protein_coding	Tbx20	intron	ENSMUSG00000031965	NonProperStrand	110	3	-inf
chr4	11446334	11446434	protein_coding	1110037F02Rik	exon	ENSMUSG00000040720	ProperStrand	32	chr9	120038613	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-7.0608
chr4	131908368	131908462	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr9	30235085	30235102	protein_coding	Snx19	exon	ENSMUSG00000031993	ProperStrand	353	3	-9.3366
chr16	57391761	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr5	3962186	3962257	protein_coding	Akap9	exon	ENSMUSG00000040407	ProperStrand	28	2	-14.7943
chr10	75400063	75400155	protein_coding	Chchd10	exon	ENSMUSG00000049422	ProperStrand	140	chr3	68889159	68889239	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-1.8156
chr11	97023577	97023677	protein_coding	Kpnb1	utr3	ENSMUSG00000001440	ProperStrand	197	chr11	97642952	97642993	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-1.5489
chr8	113447013	113447110	snoRNA	ENSMUSG00000065100_SNORA57	.	ENSMUSG00000065100	ProperStrand	81	chr16	23111777	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-4.2743
chr14	21512693	21512729	lincRNA	6230400D17Rik	intron	ENSMUSG00000086351	ProperStrand	6	chr19	31739039	31739056	protein_coding	Prkg1	intron	ENSMUSG00000052920	NonProperStrand	41	1	-18.3574
chr19	4803190	4803245	protein_coding	Rbm14	exon	ENSMUSG00000006456	ProperStrand	84	chr8	113527363	113527416	protein_coding	Ddx19b	utr3	ENSMUSG00000033658	ProperStrand	30	5	-inf
chr11	79281318	79281357	protein_coding	Nf1	intron	ENSMUSG00000020716	ProperStrand	42	chr11	68886926	68887016	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-4.8268
chr5	72680577	72680642	lincRNA	Atp10d	exon	ENSMUSG00000046808	ProperStrand	13	chr19	36189752	36189768	protein_coding	Ankrd1	exon	ENSMUSG00000024803	ProperStrand	11	1	-19.3750
chr19	10059321	10059365	protein_coding	Fth1	exon	ENSMUSG00000024661	ProperStrand	75	chr5	115939533	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-7.4204
chr3	113827103	113827119	protein_coding	Col11a1	utr3	ENSMUSG00000027966	NonProperStrand	139	chr11	98878344	98878371	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-4.6495
chr8	72287172	72287188	protein_coding	Zfp866	utr3	ENSMUSG00000043090	NonProperStrand	134	chr7	116664858	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.2887
chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr5	74489543	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	10	-6.7989
chr11	62416635	62416656	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr4	154932357	154932410	protein_coding	Gnb1	utr3	ENSMUSG00000029064	ProperStrand	69	1	-8.6915
chr2	83390830	83390910	DNA	URR1A	MER1_type	chr2URR1A83390796	NonProperStrand	1	chr2	31264782	31264872	protein_coding	Hmcn2	intron	ENSMUSG00000055632	NonProperStrand	11	1	-inf
chr11	46279946	46280036	protein_coding	Havcr2	intron	ENSMUSG00000020399	NonProperStrand	1	chr16	91696498	91696578	protein_coding	Cryzl1	intron	ENSMUSG00000058240	ProperStrand	4	1	-inf
chr5	143145542	143145578	protein_coding	Wipi2	utr3	ENSMUSG00000029578	ProperStrand	49	chr2	130101257	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-6.9934
chr12	52698007	52698052	protein_coding	Coch	exon	ENSMUSG00000020953	ProperStrand	1	chr17	28536112	28536149	protein_coding	Fkbp5	utr3	ENSMUSG00000024222	ProperStrand	44	1	-inf
chr17	5336612	5336647	protein_coding	Arid1b	exon	ENSMUSG00000069729	ProperStrand	28	chr4	131908689	131908797	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.4067
chr6	55067824	55067841	protein_coding	Crhr2	utr5	ENSMUSG00000003476	NonProperStrand	12	chr4	130305550	130305593	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	2	-19.0733
chr19	3904233	3904250	protein_coding	Tcirg1	exon	ENSMUSG00000001750	ProperStrand	77	chr2	57090809	57090827	protein_coding	Gpd2	utr5	ENSMUSG00000026827	ProperStrand	93	1	-11.9311
chr4	131865319	131865409	lincRNA	Snhg12	intron	ENSMUSG00000086290	ProperStrand	178	chr5	74489264	74489324	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	1	-3.5498
chr12	70260033	70260073	protein_coding	Rps29	utr5	ENSMUSG00000034892	ProperStrand	124	chr14	76247724	76247836	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-2.8421
chr11	87913128	87913145	processed_transcript	2210416O15Rik	.	ENSMUSG00000087498	ProperStrand	76	chr3	88715213	88715230	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-6.7647
chr9	63485639	63485729	protein_coding	Aagab	intron	ENSMUSG00000037257	ProperStrand	8	chr6	119875266	119875334	protein_coding	Wnk1	utr3	ENSMUSG00000045962	ProperStrand	221	1	-14.8396
chr4	68423440	68423456	protein_coding	Dbc1	exon	ENSMUSG00000028351	ProperStrand	78	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-6.4631
chr11	84186088	84186118	protein_coding	Acaca	exon	ENSMUSG00000020532	ProperStrand	100	chr4	131826037	131826127	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	1	-8.1956
chr17	46396226	46396310	protein_coding	Tjap1	exon	ENSMUSG00000012296	ProperStrand	11	chr10	23505159	23505249	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.1476
chr17	79940608	79940624	LINE	Lx8	L1	chr17Lx879940498	ProperStrand	1	mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	1	-inf
chr1	136312137	136312162	protein_coding	Adipor1	utr5	ENSMUSG00000026457	ProperStrand	48	chr11	51551278	51551380	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	4	-22.3799
chr5	74489235	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr1	154681024	154681041	protein_coding	Ncf2	exon	ENSMUSG00000026480	ProperStrand	12	5	-inf
chr5	3666840	3666856	protein_coding	4930511M11Rik	exon	ENSMUSG00000014529	ProperStrand	1	chr18	33954826	33954922	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-inf
chr7	73967631	73967649	protein_coding	Lass3	utr3	ENSMUSG00000030510	NonProperStrand	6	chr4	122968651	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-11.0138
chr5	106613978	106613994	LTR	RMER19C	ERVK	chr5RMER19C106613786	NonProperStrand	12	chr2	167836657	167836684	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	1	-15.4101
chr9	39404708	39404725	protein_coding	AW551984	exon	ENSMUSG00000038112	ProperStrand	11	chr16	23110828	23110870	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.6241
chr15	77591778	77599275	protein_coding	Myh9	utr3	ENSMUSG00000022443	ProperStrand	570	chr10	110918549	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-0.7096
chr9	120038467	120038552	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	chr7	106631403	106631442	snoRNA	ENSMUSG00000065822_Snord15a	.	ENSMUSG00000065822	ProperStrand	128	1	-1.7665
chr9	106365746	106365836	protein_coding	Pcbp4	utr3	ENSMUSG00000023495	ProperStrand	36	chr7	116664819	116664899	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.4622
chr6	8728377	8728394	protein_coding	Ica1	utr5	ENSMUSG00000062995	NonProperStrand	6	chr16	23110875	23110951	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.7876
chr6	89506986	89507086	protein_coding	Chchd6	intron	ENSMUSG00000030086	ProperStrand	20	chr12	112779247	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-6.9473
chr8	126462170	126463018	protein_coding	Nup133	exon	ENSMUSG00000039509	ProperStrand	59	chr19	5493535	5493576	protein_coding	Cfl1	exon	ENSMUSG00000056201	ProperStrand	88	5	-18.9786
chr10	127521199	127521272	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	chr2	26493364	26493488	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	5	-3.5809
chr9	59992284	59992301	protein_coding	Thsd4	intron	ENSMUSG00000032289	ProperStrand	20	chr15	79908931	79908984	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-7.6621
chr14	77424372	77424388	protein_coding	9030625A04Rik	utr3	ENSMUSG00000044350	NonProperStrand	152	chr17	39985356	39985391	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-4.1389
chr9	7973894	8001526	protein_coding	Yap1	exon	ENSMUSG00000053110	ProperStrand	68	chr1	162965562	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.0504
chr13	113970523	113970540	protein_coding	Gzmk	intron	ENSMUSG00000042385	ProperStrand	14	chr16	23110526	23110557	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.1866
chr10	120709244	120712786	protein_coding	Tbc1d30	exon	ENSMUSG00000052302	ProperStrand	233	chr11	6428090	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-3.2920
chr5	28403533	28403610	protein_coding	Insig1	utr3	ENSMUSG00000045294	ProperStrand	35	chr13	23610047	23610099	tRNA	tRNA112-SerTGA	.	1205618	ProperStrand	9	1	-18.0131
chrX	11596475	11596493	LINE	L1ME3A	L1	chrXL1ME3A11596435	ProperStrand	1	chr12	111724158	111760760	protein_coding	Ppp2r5c	exon	ENSMUSG00000017843	ProperStrand	36	1	-inf
chr5	124566336	124566353	protein_coding	Arl6ip4	utr5	ENSMUSG00000029404	ProperStrand	29	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-8.0451
chr14	66205210	66209382	protein_coding	Elp3	exon	ENSMUSG00000022031	ProperStrand	71	chrX	34622906	34622957	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-2.8703
chr7	3366331	3366347	protein_coding	Cacng7	exon	ENSMUSG00000069806	NonProperStrand	3	chr14	76247711	76247772	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-10.4338
chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	chr1	88252837	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-1.0336
chr12	113418700	113418790	protein_coding	Kif26a	exon	ENSMUSG00000021294	ProperStrand	8	chr2	26493404	26493484	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-7.7535
chr14	15572352	15572370	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-6.1732
chr17	85487768	85487852	protein_coding	Prepl	utr5	ENSMUSG00000024127	ProperStrand	106	chr16	23111707	23111774	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.0793
chr17	35458167	35458191	protein_coding-noncoding	H2-Q1	utr5	ENSMUSG00000079507	ProperStrand	1	chr16	23111757	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-inf
chr2	57090809	57090827	protein_coding	Gpd2	utr5	ENSMUSG00000026827	ProperStrand	93	chr13	59803286	59803302	protein_coding	Fam75d3	exon	ENSMUSG00000050876	ProperStrand	46	1	-12.9705
chr11	4820972	4820990	protein_coding	Thoc5	intron	ENSMUSG00000034274	ProperStrand	325	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-2.6768
chr17	35830580	35830611	protein_coding	Ddr1	exon	ENSMUSG00000003534	ProperStrand	129	chr11	97698774	97698840	protein_coding	Lasp1	utr3	ENSMUSG00000038366	ProperStrand	65	3	-20.7514
mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	NonProperStrand	8	chr4	131866154	131866292	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	NonProperStrand	19	2	-19.1859
chr11	4584823	4584923	protein_coding	Ascc2	utr3	ENSMUSG00000020412	ProperStrand	27	chr10	126945234	126945250	protein_coding	Stac3	exon	ENSMUSG00000040287	ProperStrand	1	1	-inf
chr11	116535923	116535982	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr18	44555634	44555651	protein_coding	Dcp2	exon	ENSMUSG00000024472	ProperStrand	44	1	-6.5237
chr11	21995931	21995952	protein_coding	Ehbp1	exon	ENSMUSG00000042302	ProperStrand	22	chr16	23110902	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.4786
chr13	32141690	32141712	protein_coding	Gmds	intron	ENSMUSG00000038372	NonProperStrand	8	chr16	23111770	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.6662
chr19	34999238	34999254	protein_coding	Kif20b	exon	ENSMUSG00000024795	NonProperStrand	28	chr4	126913701	126913755	protein_coding	Dlgap3	utr3	ENSMUSG00000042388	ProperStrand	12	1	-18.0050
chr15	90803098	90811267	protein_coding	Kif21a	exon	ENSMUSG00000022629	ProperStrand	18	chr7	29136537	29136617	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.5789
chr11	75578843	75578933	protein_coding	Ywhae	utr3	ENSMUSG00000020849	ProperStrand	176	chr9	15119685	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-0.9925
chr1	155287307	155287356	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	chr16	23111686	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	43	-20.0645
chr2	160698643	160698659	protein_coding	Zhx3	utr5	ENSMUSG00000035877	ProperStrand	16	chr15	79908957	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-8.1175
chr9	44656913	44656996	protein_coding	Mll1	exon	ENSMUSG00000002028	ProperStrand	151	chr10	110918549	110918639	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-1.8624
chr1	162966821	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	chr1	9932598	9932626	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-1.2750
chr9	108415493	108415640	protein_coding	Qars	exon	ENSMUSG00000032604	ProperStrand	16	chr11	67167096	67167112	protein_coding	Myh13	exon	ENSMUSG00000060180	ProperStrand	145	1	-14.2303
chr8	74217259	74217276	protein_coding	B3gnt3	exon	ENSMUSG00000031803	ProperStrand	3	chr14	37944738	37944763	protein_coding	Ghitm	exon	ENSMUSG00000041028	ProperStrand	26	1	-20.0435
chr3	129763540	129763556	protein_coding	Sec24b	exon	ENSMUSG00000001052	NonProperStrand	1	chr11	72257563	72257580	protein_coding	Mybbp1a	exon	ENSMUSG00000040463	ProperStrand	279	1	-inf
chr7	107071203	107071220	protein_coding	Rnf169	utr3	ENSMUSG00000058761	ProperStrand	31	chr11	6428108	6428154	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.4276
chr5	32122986	32123008	protein_coding	Bre	exon	ENSMUSG00000052139	ProperStrand	33	chr16	23110909	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-3.0989
chr11	20128546	20128613	protein_coding	Cep68	utr3	ENSMUSG00000044066	ProperStrand	15	chr16	23110912	23111002	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-5.9163
chr2	84527187	84527221	protein_coding	Med19	utr3	ENSMUSG00000027080	ProperStrand	22	chr9	120038553	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.9307
chr1	162968212	162968259	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	chr2	26768049	26768119	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	6	-13.0949
chr6	72309985	72310053	protein_coding	Rnf181	utr3	ENSMUSG00000055850	ProperStrand	12	chr4	131908708	131908798	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-9.9787
chr14	66915907	66915937	protein_coding	Trim35	exon	ENSMUSG00000022043	ProperStrand	6	chr17	35299518	35299642	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-9.4663
chr19	5798886	5798990	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr14	56159296	56159312	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	1	-5.2151
chr1	191058375	191058393	protein_coding	Kcnk2	intron	ENSMUSG00000037624	ProperStrand	56	chr16	43886794	43886928	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	3	-17.9319
chr16	57122073	57122164	protein_coding	Tomm70a	exon	ENSMUSG00000022752	ProperStrand	82	chr16	23111723	23111793	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.4298
chrX	70904087	70904123	protein_coding	Pnck	exon	ENSMUSG00000002012	ProperStrand	10	chr11	77996559	77996619	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	2	-15.5009
chr3	136856024	136856041	LINE	L1_Mus4	L1	chr3L1_Mus4136855983	ProperStrand	8	chr3	154260226	154267881	protein_coding	Cryz	utr5	ENSMUSG00000028199	ProperStrand	5	1	-18.8889
chr9	62219674	62219956	protein_coding	Anp32a	exon	ENSMUSG00000032249	ProperStrand	75	chr16	23111777	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.5602
chr6	122283430	122284129	protein_coding	Phc1	exon	ENSMUSG00000040669	ProperStrand	158	chr11	106362338	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	4	-12.8848
chr3	88715214	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr11	62418015	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	4	-3.0961
chr18	36957577	36957594	protein_coding	Zmat2	exon	ENSMUSG00000001383	ProperStrand	25	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	2	-12.2257
chr7	104845197	104856485	protein_coding	Clns1a	utr5	ENSMUSG00000025439	ProperStrand	16	chr16	23111701	23111825	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-7.2124
chr6	119894791	119896285	protein_coding	Wnk1	exon	ENSMUSG00000045962	ProperStrand	221	chr12	106269284	106269384	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-1.8499
chr2	72240528	72240563	protein_coding	B230120H23Rik	utr3	ENSMUSG00000004085	ProperStrand	34	chr5	130300473	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-6.0191
chr2	26252084	26252126	protein_coding	Pmpca	utr3	ENSMUSG00000026926	ProperStrand	45	chr16	23111726	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.3757
chr15	101963925	101963941	protein_coding	Spryd3	exon	ENSMUSG00000036966	ProperStrand	14	chr19	8799581	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-9.7095
mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr6	112689098	112689322	protein_coding	Srgap3	exon	ENSMUSG00000030257	NonProperStrand	208	1	-3.5290
chr7	68147977	68147993	LINE	Lx3_Mus	L1	chr7Lx3_Mus68146918	ProperStrand	9	chrX	45695261	45695359	protein_coding-noncoding	Bcorl1	utr5	ENSMUSG00000036959	ProperStrand	1	1	-inf
chr6	92893463	92893480	protein_coding	Adamts9	utr5	ENSMUSG00000030022	ProperStrand	27	chr2	166890531	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-9.1634
chr7	148633883	148633920	protein_coding	Rplp2	exon	ENSMUSG00000025508	ProperStrand	106	chr17	35089182	35089233	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-4.3875
chr5	104174875	104174911	protein_coding	Aff1	intron	ENSMUSG00000029313	ProperStrand	82	chr10	110918549	110918638	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-5.0062
chr8	109303486	109303512	protein_coding	Tmco7	intron	ENSMUSG00000041949	NonProperStrand	15	chr7	29136528	29136618	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.9384
chr7	29136525	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	chr6	124665349	124665483	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	15	-1.6125
chr18	43483667	43483777	protein_coding	Dpysl3	utr3	ENSMUSG00000024501	ProperStrand	9	chr1	121806056	121806078	protein_coding	Tmem177	utr3	ENSMUSG00000036975	ProperStrand	1	1	-inf
chr7	86805696	86805714	protein_coding	5730590G19Rik	exon	ENSMUSG00000046591	NonProperStrand	14	chr11	68716799	68717873	protein_coding	Rpl26	exon	ENSMUSG00000060938	ProperStrand	130	1	-14.7303
chr11	6520319	6520419	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	chr15	5068429	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-1.1354
chr8	89148039	89148073	protein_coding	Lonp2	utr5	ENSMUSG00000047866	ProperStrand	13	chr18	35714247	35714288	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-6.4211
chr10	17443079	17443097	protein_coding	Cited2	utr5	ENSMUSG00000039910	ProperStrand	64	chr19	8963026	8963126	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-3.8878
chr14	25311301	25312613	protein_coding	Rps24	exon	ENSMUSG00000025290	ProperStrand	110	chr18	75161533	75161584	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-6.0049
chr17	20970986	20971066	LINE	L1Md_F2	L1	chr17L1Md_F220968905	ProperStrand	1	chr18	5177648	5177738	LINE	L1VL1	L1	chr18L1VL15175422	ProperStrand	1	1	-inf
chr15	81110991	81111009	SINE	ID4	ID	chr15ID481110956	ProperStrand	272	chr11	106362335	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-2.9886
chr13	52738487	52741157	protein_coding	Syk	exon	ENSMUSG00000021457	ProperStrand	20	chr1	162967137	162967178	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	1	-10.9028
chr4	131908390	131908490	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr5	122951700	122951775	protein_coding	Atp2a2	utr5	ENSMUSG00000029467	ProperStrand	166	1	-5.2582
chr13	98252717	98259146	lincRNA	Gm11019	intron	ENSMUSG00000078952	ProperStrand	113	chr4	131908687	131908784	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-1.0998
chr13	56197524	56197554	protein_coding	H2afy	exon	ENSMUSG00000015937	ProperStrand	103	chr9	15119738	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.7420
chr17	46541110	46541145	misc_RNA	7SK	.	ENSMUSG00000065808	NonProperStrand	1	chr4	125390552	125390624	protein_coding	Grik3	utr3	ENSMUSG00000001985	NonProperStrand	5	1	-inf
chr4	134926614	134927796	protein_coding	A330049M08Rik	exon	ENSMUSG00000043924	ProperStrand	130	chr17	39985621	39985642	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-4.4346
chr4	55431686	55431707	lincRNA	Gm12505	exon	ENSMUSG00000087070	ProperStrand	447	chr6	82675193	82675238	protein_coding	Hk2	utr3	ENSMUSG00000000628	ProperStrand	88	1	-8.5250
chr3	113827103	113827119	protein_coding	Col11a1	utr3	ENSMUSG00000027966	NonProperStrand	139	chr17	23960840	23960856	protein_coding	Srrm2	utr3	ENSMUSG00000039218	ProperStrand	521	1	-7.3110
chr6	125052982	125053038	protein_coding	Chd4	exon	ENSMUSG00000063870	ProperStrand	303	chr11	77995189	77995236	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-3.1061
chr15	101862364	101862418	protein_coding	Krt18	utr3	ENSMUSG00000023043	ProperStrand	6	chr6	134457647	134461175	protein_coding	Lrp6	exon	ENSMUSG00000030201	ProperStrand	42	3	-19.3598
chr16	54444537	54444617	Simple_repeat	(TG)n	Simple_repeat	chr16(TG)n54444360	NonProperStrand	1	chr2	103222352	103222442	lincRNA	BC016548	intron	ENSMUSG00000070794	NonProperStrand	1	1	-inf
chr5	58453757	58453774	protein_coding	Pcdh7	intron	ENSMUSG00000029108	NonProperStrand	10	chr16	23110827	23110851	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.7978
chr11	116712217	116713376	protein_coding	Srsf2	utr3	ENSMUSG00000034120	ProperStrand	132	chr4	131865891	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	8	-10.0161
chr1	59926496	59926529	protein_coding	Bmpr2	intron	ENSMUSG00000067336	ProperStrand	11	chr11	62418045	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-8.9791
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr1	162965980	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-0.8503
chr5	3693225	3693241	protein_coding	Ankib1	exon	ENSMUSG00000040351	NonProperStrand	98	chr6	120882388	120882405	protein_coding	Mical3	utr3	ENSMUSG00000051586	ProperStrand	104	2	-17.7479
chr17	12894871	12894887	protein_coding	Igf2r	exon	ENSMUSG00000023830	NonProperStrand	8	chr4	41173324	41174306	protein_coding	Ubap2	exon	ENSMUSG00000028433	ProperStrand	292	1	-14.2690
chr3	96218474	96218564	misc_RNA	Telomerase-vert	.	ENSMUSG00000064796	ProperStrand	443	chr2	158182210	158182290	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-1.4844
chr7	54443898	54443971	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	chr4	116828379	116828407	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-4.8619
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr11	119136228	119136244	protein_coding	Gaa	exon	ENSMUSG00000025579	NonProperStrand	201	1	-5.4109
chr11	69481379	69481479	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	NonProperStrand	24	chr5	108334195	108334234	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	NonProperStrand	17	2	-20.0090
chr2	158185526	158185566	lincRNA	9430008C03Rik	exon	ENSMUSG00000085385	ProperStrand	1039	chr7	109148456	109148523	protein_coding	Numa1	utr5	ENSMUSG00000066306	ProperStrand	148	1	-5.8310
chr13	74311484	74311573	protein_coding	Exoc3	exon	ENSMUSG00000034152	ProperStrand	9	chr8	127419886	127419902	protein_coding	Exoc8	exon	ENSMUSG00000074030	NonProperStrand	3	3	-inf
chr14	19101562	19102830	protein_coding	Rpl15	exon	ENSMUSG00000012405	ProperStrand	145	chr7	150717298	150717350	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	4	-12.4706
chr12	88512705	88512758	protein_coding	Tmed8	utr3	ENSMUSG00000034111	ProperStrand	22	chr7	51505842	51505910	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	3	-inf
chr18	57400307	57400324	protein_coding	Megf10	exon	ENSMUSG00000024593	ProperStrand	143	chr9	70055307	70055336	protein_coding	Myo1e	utr5	ENSMUSG00000032220	ProperStrand	36	1	-12.6018
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	ProperStrand	10	chr12	112779145	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	NonProperStrand	10	2	-21.8466
chr2	90558399	90561351	protein_coding	Nup160	exon	ENSMUSG00000051329	ProperStrand	49	chr8	73419657	73419729	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.4996
chr4	155496287	155496358	protein_coding-noncoding	9430015G10Rik	utr5	ENSMUSG00000059939	ProperStrand	3	chr6	86619040	86619056	protein_coding	Mxd1	utr5	ENSMUSG00000001156	NonProperStrand	40	1	-20.6314
chr13	59873278	59873302	protein_coding	Zcchc6	utr3	ENSMUSG00000035248	ProperStrand	23	chr7	116663634	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.2677
chr2	179885808	179887995	protein_coding	Osbpl2	exon	ENSMUSG00000039050	ProperStrand	6	chr1	162965548	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-7.8657
chrX	50622605	50622651	protein_coding	Fam122b	utr5	ENSMUSG00000036022	ProperStrand	20	chr16	23111389	23111479	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.0472
chr5	140857296	140857313	protein_coding	Snx8	intron	ENSMUSG00000029560	ProperStrand	106	chr14	31827503	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-5.8220
chr10	117227045	117227061	protein_coding	Nup107	exon	ENSMUSG00000052798	NonProperStrand	66	chr8	26827320	26827337	protein_coding	Whsc1l1	utr3	ENSMUSG00000054823	NonProperStrand	17	1	-15.6966
chr7	57200869	57200885	protein_coding	Slc6a5	exon	ENSMUSG00000039728	NonProperStrand	1	chr11	6428088	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-inf
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr1	152268927	152269668	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	1	-1.8824
chr6	124808760	124808776	protein_coding	Gpr162	exon	ENSMUSG00000038390	NonProperStrand	40	chr1	9932550	9932616	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	2	-13.5994
chr2	31534035	31534086	protein_coding	Exosc2	exon	ENSMUSG00000039356	ProperStrand	39	chr19	8800355	8800444	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-4.3397
chr11	6529593	6529642	LTR	MTC	MaLR	chr11MTC6529599	NonProperStrand	1	chr11	5682123	5682139	pseudogene	2210015D19Rik	.	ENSMUSG00000083844	ProperStrand	24	1	-inf
chr12	110918157	110918221	snoRNA	ENSMUSG00000065749_AF357428	.	ENSMUSG00000065749	ProperStrand	218	chr6	71832595	71832685	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-3.1716
chr10	21716395	21716792	protein_coding	Sgk1	exon	ENSMUSG00000019970	ProperStrand	55	chr4	131865432	131865512	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-4.1665
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr1	58228679	58228696	protein_coding	Aox3	exon	ENSMUSG00000064294	ProperStrand	39	1	-9.4592
chr11	94530755	94530855	protein_coding	Xylt2	exon	ENSMUSG00000020868	ProperStrand	65	chr4	131908237	131908286	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.3054
chr7	19591412	19591428	protein_coding	Irf2bp1	exon	ENSMUSG00000044030	NonProperStrand	81	chr7	116664811	116664901	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.0473
chr7	74189892	74189909	protein_coding	Adamts17	intron	ENSMUSG00000058145	NonProperStrand	73	chr18	35716684	35716761	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.8536
chr1	30886688	30886767	protein_coding	Phf3	exon	ENSMUSG00000048874	ProperStrand	102	chr9	120039533	120039561	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-4.2226
chr3	89821111	89821211	protein_coding	Ubap2l	exon	ENSMUSG00000042520	ProperStrand	88	chr16	23111376	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	13	-19.0098
chr5	74489448	74489505	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr9	58005602	58005619	protein_coding	Islr	exon	ENSMUSG00000037206	NonProperStrand	11	1	-9.0454
chr5	47578017	47578057	LINE	L1_Mus2	L1	chr5L1_Mus247577737	ProperStrand	7	chr5	115939536	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	7	-inf
chr14	21323097	21323123	protein_coding	Ppp3cb	intron	ENSMUSG00000021816	ProperStrand	17	chr7	116664811	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-8.1612
chr17	23955821	23955838	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	chr12	83272820	83272837	protein_coding	Sipa1l1	intron	ENSMUSG00000042700	NonProperStrand	12	1	-14.7688
chr4	129992485	129992550	protein_coding	Fabp3	utr3	ENSMUSG00000028773	ProperStrand	93	chr16	23110915	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-2.4266
chr14	57204539	57204555	protein_coding	Parp4	exon	ENSMUSG00000054509	NonProperStrand	113	chr16	23110454	23110515	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.4574
chr7	19962851	19962879	protein_coding	Ppp1r13l	exon	ENSMUSG00000040734	ProperStrand	13	chr11	77995189	77995251	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-9.2703
chr19	18745537	18745554	protein_coding	2410127L17Rik	exon	ENSMUSG00000024726	ProperStrand	43	chr10	12728697	12728744	protein_coding	Sf3b5	utr3	ENSMUSG00000078348	ProperStrand	3	1	-inf
chr4	155197741	155197800	protein_coding	Ccnl2	exon	ENSMUSG00000029068	ProperStrand	19	chr5	110537125	110537215	protein_coding	Gtpbp6	utr5	ENSMUSG00000033434	ProperStrand	9	5	-inf
chr15	83112894	83112911	SINE	B4A	B4	chr15B4A83112818	ProperStrand	3	chr4	131865855	131865901	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.6896
chr4	107547504	107547520	protein_coding	Lrp8	utr3	ENSMUSG00000028613	NonProperStrand	7	chr2	66073722	66074288	protein_coding	Ttc21b	exon	ENSMUSG00000034848	NonProperStrand	1	1	-inf
chr10	89252417	89252441	protein_coding	Uhrf1bp1l	intron	ENSMUSG00000019951	ProperStrand	28	chr11	6428035	6428135	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.6242
chr17	35293667	35293742	protein_coding	Prrc2a	exon	ENSMUSG00000024393	ProperStrand	315	chr18	73693113	73693135	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-2.4505
chr2	162899209	162899255	protein_coding	Mybl2	intron	ENSMUSG00000017861	ProperStrand	230	chr9	45676031	45676108	protein_coding	Rnf214	exon	ENSMUSG00000042790	ProperStrand	24	1	-12.4742
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	5	-5.9528
chr15	57947313	57948324	protein_coding	Atad2	exon	ENSMUSG00000022360	ProperStrand	47	chr4	86502058	86502106	protein_coding	Rps6	exon	ENSMUSG00000028495	ProperStrand	263	12	-inf
chr2	73747361	73749344	protein_coding	Atp5g3	utr5	ENSMUSG00000018770	ProperStrand	41	chr16	23110829	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-2.4460
chr11	117862148	117862183	protein_coding-noncoding	Pgs1	utr5	ENSMUSG00000017715	NonProperStrand	6	chr12	60141416	60141509	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	6	-inf
chr2	69792343	69792398	protein_coding	Ubr3	exon	ENSMUSG00000044308	ProperStrand	62	chr3	123210877	123210897	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.0132
chr9	15119713	15119759	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	chr12	60774058	60774109	snoRNA	ENSMUSG00000077603_SNORA3	.	ENSMUSG00000077603	ProperStrand	185	1	-0.9314
chr19	8798484	8798553	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	chr7	52381720	52381806	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	2	-1.1905
chr16	17259639	17259739	protein_coding	Hic2	utr3	ENSMUSG00000050240	ProperStrand	36	chr16	23111386	23111435	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-3.6850
chr9	120038551	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	chr4	132394296	132394462	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	3	-1.1727
chr19	55423991	55424008	protein_coding	Vti1a	intron	ENSMUSG00000024983	NonProperStrand	62	chr6	125174665	125174717	protein_coding	Tapbpl	utr3	ENSMUSG00000038213	ProperStrand	1	1	-inf
chr17	17331631	17331682	LTR	RLTR25A	ERVK	chr17RLTR25A17331480	NonProperStrand	1	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-inf
chr1	181067485	181067503	protein_coding	Smyd3	intron	ENSMUSG00000055067	NonProperStrand	190	chr12	17552960	17553032	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	2	-5.0762
chr1	88252837	88252901	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	chr2	158182156	158182278	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	3	-0.7921
chr19	41841854	41852428	protein_coding	Arhgap19	exon	ENSMUSG00000025154	ProperStrand	34	chr16	23110830	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-7.8300
chr2	35477754	35477770	protein_coding	Dab2ip	exon	ENSMUSG00000026883	ProperStrand	93	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-4.3574
chr2	153594136	153594236	protein_coding	Mapre1	utr3	ENSMUSG00000027479	ProperStrand	19	chr5	77396178	77396205	protein_coding	Paics	utr3	ENSMUSG00000029247	ProperStrand	78	1	-15.1177
chr2	167836656	167836680	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	chr12	87811231	87811248	protein_coding	Esrrb	exon	ENSMUSG00000021255	ProperStrand	254	1	-9.2415
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr5	124927861	124927877	protein_coding	Rilpl2	exon	ENSMUSG00000029401	ProperStrand	6	1	-16.0952
chr17	79284496	79284540	protein_coding	Sult6b1	exon	ENSMUSG00000038045	ProperStrand	5	chr11	69481334	69481378	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-8.1843
chrX	147779210	147779228	protein_coding	Fam120c	exon	ENSMUSG00000025262	ProperStrand	6	chr4	140723745	140723761	protein_coding	Fbxo42	exon	ENSMUSG00000028920	ProperStrand	91	1	-17.0728
chrX	70237450	70237471	miRNA	Mir2137	.	ENSMUSG00000089357	ProperStrand	50	chr11	58809803	58810353	protein_coding	Obscn	exon	ENSMUSG00000061462	ProperStrand	81	1	-13.0793
chr7	29107125	29107246	protein_coding	Supt5h	exon	ENSMUSG00000003435	ProperStrand	123	chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	1	-9.1794
chr2	92440278	92440296	protein_coding	Chst1	utr5	ENSMUSG00000027221	ProperStrand	17	chr11	69481333	69481401	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.6167
chr8	3614249	3614265	protein_coding	Xab2	exon	ENSMUSG00000019470	ProperStrand	52	chr5	20456969	20456986	protein_coding	Rsbn1l	intron	ENSMUSG00000039968	NonProperStrand	7	1	-18.2493
chr15	89289647	89289683	protein_coding	Mapk8ip2	exon	ENSMUSG00000022619	ProperStrand	5	chr16	23111689	23111735	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-16.2723
chr4	43505656	43505722	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chrX	65969857	65969884	protein_coding	Fmr1	utr3	ENSMUSG00000000838	ProperStrand	18	1	-5.3613
chr19	53695109	53696233	protein_coding	Smc3	exon	ENSMUSG00000024974	ProperStrand	61	chr9	30235085	30235101	protein_coding	Snx19	exon	ENSMUSG00000031993	ProperStrand	353	3	-inf
chrX	117040899	117041451	protein_coding	Pabpc5	utr5	ENSMUSG00000034732	NonProperStrand	24	chr1	162965531	162965588	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.0142
chr5	141000555	141000572	protein_coding	Chst12	exon	ENSMUSG00000036599	NonProperStrand	42	chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	1	-8.8251
chr18	64671311	64671498	protein_coding	Nars	exon	ENSMUSG00000024587	ProperStrand	97	chr7	148634801	148634827	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-3.1025
chr9	108402031	108402047	protein_coding	Usp19	exon	ENSMUSG00000006676	ProperStrand	57	chr11	97642957	97643007	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.5597
chr2	167836657	167836676	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	chr10	6438171	6438187	protein_coding	Plekhg1	intron	ENSMUSG00000040624	NonProperStrand	75	1	-11.6841
chr8	26879956	26881588	protein_coding	Bag4	exon	ENSMUSG00000037316	ProperStrand	10	chr11	69481353	69481433	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-6.6979
chr3	144260084	144260174	protein_coding	Sep15	utr3	ENSMUSG00000037072	ProperStrand	19	chr5	92485109	92485189	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	1	-11.0681
chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	chr15	101921847	101921898	protein_coding	Eif4b	exon	ENSMUSG00000058655	ProperStrand	484	1	-2.9966
chr12	16946855	16946929	snoRNA	ENSMUSG00000064620_SNORA32	.	ENSMUSG00000064620	ProperStrand	165	chr18	35714189	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-1.7202
chr6	21984211	21984229	lincRNA	Gm17429	intron	ENSMUSG00000090888	ProperStrand	4	chr1	162965531	162965559	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-8.7752
chr9	30958396	30958423	protein_coding	Aplp2	utr3	ENSMUSG00000031996	ProperStrand	172	chr7	117189964	117190026	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-1.5663
chr5	137814787	137814821	protein_coding	Ephb4	exon	ENSMUSG00000029710	ProperStrand	49	chrX	34622913	34623003	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-3.5413
chr15	98742860	98742885	protein_coding	Lmbr1l	utr5	ENSMUSG00000022999	ProperStrand	8	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-7.5918
chr9	64023962	64025713	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	chr2	26768369	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	2	-2.7596
chr1	60038613	60038713	protein_coding	Fam117b	utr3	ENSMUSG00000041040	ProperStrand	31	chr11	62416952	62417021	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	2	-11.8288
chr14	66440564	66442957	protein_coding	Esco2	exon	ENSMUSG00000022034	NonProperStrand	4	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	4	-inf
chr5	75473198	75473215	protein_coding	Gsx2	utr3	ENSMUSG00000035946	ProperStrand	307	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-1.5755
chr7	24779190	24779213	SINE	ID_B1	B4	chr7ID_B124779183	NonProperStrand	54	chr3	97819415	97819432	protein_coding	Notch2	intron	ENSMUSG00000027878	NonProperStrand	6	1	-18.0672
chr13	97896983	97897083	protein_coding	Fam169a	utr3	ENSMUSG00000041817	ProperStrand	12	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-9.1155
chr8	72440296	72440506	protein_coding	Gatad2a	exon	ENSMUSG00000036180	ProperStrand	112	chr10	127521199	127521230	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	4	-inf
chr11	78085547	78085616	protein_coding	2610507B11Rik	exon	ENSMUSG00000010277	ProperStrand	246	chr6	129136019	129136035	protein_coding	Clec2d	utr3	ENSMUSG00000030157	NonProperStrand	7	1	-14.9146
chr10	21019632	21019709	protein_coding	Hbs1l	intron	ENSMUSG00000019977	ProperStrand	27	chr15	79913288	79913332	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-5.1173
chr19	8782270	8782314	protein_coding	Slc3a2	exon	ENSMUSG00000010095	ProperStrand	63	chr4	155507372	155507389	pseudogene	9930005F22Rik	.	ENSMUSG00000073672	ProperStrand	1	1	-inf
chr12	17555230	17555418	protein_coding	Odc1	exon	ENSMUSG00000011179	ProperStrand	173	chr3	108357255	108357289	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-2.6008
chr4	116862592	116862662	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	chr18	35102298	35102342	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-2.3995
chr17	39985058	39985098	pseudogene	AY036118	.	ENSMUSG00000045999	ProperStrand	57	chr15	34370591	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	NonProperStrand	21	1	-15.5212
chrX	148295238	148296848	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	chr14	64829132	64829149	protein_coding	Msra	intron	ENSMUSG00000054733	NonProperStrand	84	1	-8.3912
chr14	55263383	55263591	protein_coding	Acin1	exon	ENSMUSG00000022185	ProperStrand	67	chr4	131865413	131865503	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	8	-20.7818
chr18	51475627	51475717	protein_coding	Prr16	intron	ENSMUSG00000073565	NonProperStrand	3	chr18	51475805	51475895	protein_coding	Prr16	intron	ENSMUSG00000073565	ProperStrand	16	1	-inf
chr1	136645404	136645421	protein_coding	Syt2	utr3	ENSMUSG00000026452	NonProperStrand	13	chr6	124864723	124864953	protein_coding	Ptms	exon	ENSMUSG00000030122	ProperStrand	21	1	-18.7094
mmu-miR-6240	2	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr4	85016349	85016365	protein_coding	Sh3gl2	intron	ENSMUSG00000028488	NonProperStrand	313	5	-12.4885
chr9	120483253	120483304	protein_coding	Rpl14	exon	ENSMUSG00000025794	ProperStrand	123	chrX	151363987	151364006	protein_coding	Magea6	intron	ENSMUSG00000063728	ProperStrand	1	1	-inf
chr5	12512770	12512791	protein_coding	Sema3d	intron	ENSMUSG00000040254	NonProperStrand	2	chr15	98675055	98675155	protein_coding	Mll2	exon	ENSMUSG00000048154	ProperStrand	170	1	-19.5134
chr5	122773160	122773177	protein_coding	Pptc7	utr3	ENSMUSG00000038582	NonProperStrand	19	chr5	121655016	121655099	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.9783
chr7	118133840	118133862	LTR	RMER17C	ERVK	chr7RMER17C118133577	NonProperStrand	1	chr4	131908789	131908879	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-inf
chr17	34077644	34077700	protein_coding	Wdr46	utr5	ENSMUSG00000024312	ProperStrand	19	chr17	35089181	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-7.7793
chr11	115453833	115456237	protein_coding	Gga3	exon	ENSMUSG00000020740	ProperStrand	44	chr19	8798765	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-5.4038
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	1	-4.3212
chr19	8798484	8798553	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	chr17	24802980	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	33	-1.0237
chr1	39605591	39605681	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	chr16	43886852	43886932	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	1	-2.3927
chr7	34998062	34998162	protein_coding	Gpi1	intron	ENSMUSG00000036427	ProperStrand	288	chr6	115757988	115758065	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-2.5573
chr10	110918549	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	chr1	9932550	9932626	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	4	-0.7418
chr6	35155465	35155498	protein_coding	Nup205	exon	ENSMUSG00000038759	ProperStrand	56	chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-5.9781
chr9	103104259	103104335	protein_coding	Gm20425	exon	ENSMUSG00000090639	ProperStrand	22	chr16	23110968	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-6.3713
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	26766970	26766996	protein_coding	Rpl7a	exon	ENSMUSG00000062647	ProperStrand	234	1	-2.0298
chr2	103618248	103619344	protein_coding	Caprin1	exon	ENSMUSG00000027184	ProperStrand	145	chr2	26494708	26494820	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.6345
chr19	5104987	5105087	protein_coding	Rab1b	intron	ENSMUSG00000024870	ProperStrand	133	chr16	23110530	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.2290
chr15	96850207	96850255	protein_coding	Slc38a4	exon	ENSMUSG00000022464	ProperStrand	139	chr5	104035512	104035528	protein_coding	Slc10a6	utr3	ENSMUSG00000029321	NonProperStrand	1	1	-inf
chr8	73419318	73419898	protein_coding	Rpl18a	exon	ENSMUSG00000045128	ProperStrand	394	chr7	117189913	117190023	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	6	-5.5735
chr17	23961068	23961242	protein_coding	Srrm2	utr3	ENSMUSG00000039218	ProperStrand	521	chr7	150717298	150717350	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	9	-17.8443
chr12	92823024	92823081	protein_coding	Gtf2a1	intron	ENSMUSG00000020962	ProperStrand	61	chr17	35087894	35087946	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-5.1680
chr1	14908903	14908919	protein_coding	Trpa1	utr5	ENSMUSG00000032769	ProperStrand	24	chr2	31924012	31924028	protein_coding	Fam78a	utr3	ENSMUSG00000050592	NonProperStrand	340	1	-11.6921
chr7	116444383	116444401	protein_coding	Stk33	intron	ENSMUSG00000031027	NonProperStrand	3	chr19	8963024	8963114	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-8.3179
chrX	71696576	71696676	protein_coding	Ikbkg	utr3	ENSMUSG00000004221	ProperStrand	9	chr2	26493366	26493494	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	5	-19.9947
chr1	133141328	133141345	protein_coding	Rassf5	exon	ENSMUSG00000026430	ProperStrand	73	chr7	116663696	116663769	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-3.9074
chr16	34986602	34986619	protein_coding	Mylk	exon	ENSMUSG00000022836	NonProperStrand	56	chr17	13112498	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-4.7123
chr18	52491922	52491938	protein_coding	Ftmt	exon	ENSMUSG00000024510	ProperStrand	7	chr4	131865856	131865946	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	5	-21.6852
chr2	130101993	130102083	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	chr7	51505506	51505591	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	1	-1.3665
chr14	51427120	51427220	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr2	165880549	165880582	protein_coding	Ncoa3	exon	ENSMUSG00000027678	ProperStrand	58	1	-7.2767
chr10	39943599	39943637	protein_coding	Rpf2	exon	ENSMUSG00000038510	ProperStrand	6	chr16	23110454	23110538	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-11.4714
chr1	89673647	89673727	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	chr5	135529895	135529985	snoRNA	ENSMUSG00000088008_SCARNA20	.	ENSMUSG00000088008	ProperStrand	139	6	-11.6394
chr9	21776096	21776214	protein_coding	Rgl3	utr3	ENSMUSG00000040146	ProperStrand	12	chr16	23110965	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-15.8439
chr11	103683388	103683488	protein_coding	Nsf	utr3	ENSMUSG00000034187	NonProperStrand	7	chrX	34622906	34622934	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	NonProperStrand	26	3	-inf
chr10	80949731	80949770	protein_coding	Ncln	utr3	ENSMUSG00000020238	ProperStrand	18	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7867
chr6	67231759	67231809	protein_coding	Serbp1	exon	ENSMUSG00000036371	ProperStrand	261	chr2	138188029	138188045	protein_coding	Btbd3	intron	ENSMUSG00000062098	NonProperStrand	121	1	-8.9601
chr5	28095269	28095359	protein_coding	Paxip1	intron	ENSMUSG00000002221	ProperStrand	34	chr10	110918548	110918628	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	4	-14.4410
chr9	63985662	63985726	protein_coding	Zwilch	utr3	ENSMUSG00000032400	ProperStrand	29	chr17	6239186	6239270	protein_coding	Tulp4	utr3	ENSMUSG00000034377	ProperStrand	164	2	-19.7070
chr1	120574304	120574372	protein_coding	Tfcp2l1	utr3	ENSMUSG00000026380	ProperStrand	158	chr17	24857716	24857795	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-0.8854
chr7	146684406	146684425	protein_coding	Inpp5a	intron	ENSMUSG00000025477	ProperStrand	166	chr17	24665420	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-3.0397
chr4	136111187	136113559	protein_coding	Kdm1a	exon	ENSMUSG00000036940	ProperStrand	83	chr16	23111452	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-1.7192
chr12	110783130	110783191	lincRNA	Meg3	exon	ENSMUSG00000021268	ProperStrand	61	chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-6.4215
chr2	150597300	150597316	protein_coding	Entpd6	utr3	ENSMUSG00000033068	NonProperStrand	1	chr10	99923613	99923629	protein_coding	Tmtc3	exon	ENSMUSG00000036676	NonProperStrand	9	1	-inf
chr11	93829553	93829598	protein_coding	Nme1	utr5	ENSMUSG00000037601	ProperStrand	12	chr4	131865855	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.6729
chr6	34910293	34910310	protein_coding	2010107G12Rik	intron	ENSMUSG00000029847	NonProperStrand	3	chr16	23111385	23111413	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-6.9982
chr10	7630545	7630562	protein_coding	Tab2	intron	ENSMUSG00000015755	NonProperStrand	9	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-9.0452
chr12	88791581	88791813	protein_coding	Snw1	exon	ENSMUSG00000021039	ProperStrand	36	chr16	23110963	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	18	-20.0687
chr17	14039604	14040933	protein_coding	Mllt4	exon	ENSMUSG00000068036	ProperStrand	156	chr15	98350183	98350263	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-2.9833
chr16	20675876	20686987	protein_coding	Eif4g1	exon	ENSMUSG00000045983	ProperStrand	199	chr16	23111724	23111821	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-1.6481
chr9	15124254	15124278	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	NonProperStrand	100	chr1	24621362	24621449	protein_coding	Gm10925	intron	ENSMUSG00000090378	ProperStrand	320	1	-8.9349
chr19	41991263	41992145	protein_coding	Pgam1	exon	ENSMUSG00000011752	ProperStrand	124	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.3085
chr7	108440949	108440967	protein_coding	Atg16l2	intron	ENSMUSG00000047767	ProperStrand	121	chr9	120038548	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	4	-7.1907
chr6	83318070	83318086	protein_coding	Tet3	exon	ENSMUSG00000034832	NonProperStrand	93	chr6	71832630	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-4.7608
chr2	90235297	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	141071323	141071339	protein_coding	Dennd1b	utr3	ENSMUSG00000056268	NonProperStrand	6	1	-9.1372
chr2	132089145	132089161	protein_coding	Cds2	utr5	ENSMUSG00000058793	NonProperStrand	16	chr7	116664794	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-5.0191
chr15	99070172	99070188	protein_coding	Kcnh3	exon	ENSMUSG00000037579	NonProperStrand	44	chr11	62416600	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-5.7731
chr17	95160908	95218243	protein_coding	2610044O15Rik	exon	ENSMUSG00000066057	NonProperStrand	70	chr8	129468746	129468881	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	4	-13.3068
chr2	9991349	10001985	protein_coding	Atp5c1	exon	ENSMUSG00000025781	ProperStrand	138	chr19	8963020	8963129	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.0348
chr7	86600369	86600469	protein_coding	Polg	exon	ENSMUSG00000039176	ProperStrand	93	chr1	162965562	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-4.4072
chr1	67082392	67082462	protein_coding	Lancl1	intron	ENSMUSG00000026000	ProperStrand	8	chr1	71676288	71676338	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	2	-18.2048
chrX	10294537	10294555	protein_coding	Mid1ip1	utr5	ENSMUSG00000008035	NonProperStrand	4	chr16	38158106	38158215	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	1	-14.3233
chr5	147284336	147284373	Simple_repeat	(TGGA)n	Simple_repeat	chr5(TGGA)n147284339	ProperStrand	1	chr11	69805274	69805936	protein_coding	Gabarap	exon	ENSMUSG00000018567	ProperStrand	24	1	-inf
chr9	106183979	106183996	protein_coding	Poc1a	intron	ENSMUSG00000023345	ProperStrand	27	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.7840
chr11	62366060	62366090	protein_coding	Ubb	exon	ENSMUSG00000019505	ProperStrand	32	chr10	110918592	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-7.7168
chr5	34112034	34112050	protein_coding	Letm1	exon	ENSMUSG00000005299	NonProperStrand	145	chr9	98497387	98498554	protein_coding	Mrps22	exon	ENSMUSG00000032459	NonProperStrand	1	1	-inf
chr2	164597549	164597709	protein_coding	Ube2c	exon	ENSMUSG00000001403	ProperStrand	40	chr11	82692475	82692491	protein_coding	Rad51l3	exon	ENSMUSG00000018841	ProperStrand	112	1	-12.8803
chr5	108330925	108331086	protein_coding	Rpl5	exon	ENSMUSG00000058558	ProperStrand	235	chr9	15119641	15119736	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	7	-7.8359
chr9	15119967	15119985	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	chr10	90581034	90581087	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	4	-1.8836
chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr13	59803286	59803302	protein_coding	Fam75d3	exon	ENSMUSG00000050876	ProperStrand	46	1	-6.9819
chr6	117795659	117795676	protein_coding	Zfp637	exon	ENSMUSG00000059689	NonProperStrand	53	chr17	13112471	13112528	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-4.8185
chr5	117835463	117836807	protein_coding	Rfc5	exon	ENSMUSG00000029363	ProperStrand	15	chr7	116663640	116663714	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-5.1056
chr10	77450754	77450822	protein_coding	Pfkl	utr3	ENSMUSG00000020277	ProperStrand	179	chrX	147435216	147435246	protein_coding	Gnl3l	exon	ENSMUSG00000025266	ProperStrand	52	1	-11.4082
chrX	34138463	34138484	protein_coding	Pgrmc1	exon	ENSMUSG00000006373	ProperStrand	9	chr10	110918577	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-7.1883
chr16	37384897	37384913	protein_coding	Stxbp5l	utr5	ENSMUSG00000022829	ProperStrand	332	chr7	149170855	149171340	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	1	-7.8276
chr4	149383015	149383037	protein_coding	H6pd	utr5	ENSMUSG00000028980	NonProperStrand	2	chr1	162965531	162965596	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-10.5602
chr5	114204284	114204323	protein_coding	Sart3	exon	ENSMUSG00000018974	ProperStrand	50	chr16	23111374	23111464	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.5189
chr11	69163957	69163980	protein_coding	Chd3	intron	ENSMUSG00000018474	ProperStrand	438	chr11	115658768	115658969	protein_coding	2310067B10Rik	exon	ENSMUSG00000020747	ProperStrand	74	2	-14.1404
chr9	26440743	26440759	DNA	MER5A	MER1_type	chr9MER5A26440741	ProperStrand	108	chr11	6428123	6428155	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.1738
chr5	122809251	122809341	protein_coding	Vps29	intron	ENSMUSG00000029462	NonProperStrand	2	chr6	92588122	92588202	protein_coding	Prickle2	intron	ENSMUSG00000030020	NonProperStrand	5	1	-21.6030
chrX	12264320	12266463	protein_coding	Med14	exon	ENSMUSG00000064127	NonProperStrand	22	chr4	131908753	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.8292
chr12	104317206	104317223	protein_coding	Unc79	exon	ENSMUSG00000021198	ProperStrand	99	chr7	29136525	29136608	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.5673
chr19	9967792	9967820	protein_coding	Incenp	exon	ENSMUSG00000024660	ProperStrand	111	chr8	32260335	32260385	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	3	-8.6333
chr10	80639413	80640442	protein_coding	Eef2	utr5	ENSMUSG00000034994	ProperStrand	2244	chr4	116827149	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	8	-10.0240
chr1	63225254	63225322	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	chr11	69481334	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	6	-3.4324
chr1	193730797	193730813	protein_coding	Slc30a1	utr5	ENSMUSG00000037434	ProperStrand	42	chr1	162966813	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-6.9669
chr9	30958042	30958065	protein_coding	Aplp2	utr3	ENSMUSG00000031996	ProperStrand	172	chr1	92689614	92689630	protein_coding	Col6a3	exon	ENSMUSG00000048126	ProperStrand	79	1	-10.6472
chr5	31208132	31208580	protein_coding	Agbl5	utr3	ENSMUSG00000029165	ProperStrand	12	chr12	17552949	17553015	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-8.3166
chr16	20107470	20123270	protein_coding	Klhl24	exon	ENSMUSG00000062901	ProperStrand	212	chr5	130300460	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	5	-4.9507
chr3	90269128	90269228	protein_coding	Npr1	exon	ENSMUSG00000027931	ProperStrand	4	chr4	131908688	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-6.2660
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr15	79908945	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	2	-2.1918
chr16	4617185	4617252	protein_coding	Pam16	exon	ENSMUSG00000014301	ProperStrand	5	chr11	3426352	3426368	protein_coding	Smtn	exon	ENSMUSG00000020439	ProperStrand	222	1	-15.8234
chr5	140267636	140267654	protein_coding	Mafk	utr5	ENSMUSG00000018143	ProperStrand	4	chr7	147172315	147172653	protein_coding	Adam8	exon	ENSMUSG00000025473	ProperStrand	1	1	-inf
chr4	82691370	82691388	protein_coding	Frem1	intron	ENSMUSG00000059049	ProperStrand	11	chr16	23110827	23110866	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.6241
chr11	68067261	68067277	protein_coding	Ntn1	intron	ENSMUSG00000020902	NonProperStrand	194	chr8	73419692	73419743	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-1.2360
chr19	10057323	10057423	protein_coding	Fth1	utr5	ENSMUSG00000024661	NonProperStrand	3	chr16	11144153	11144205	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	1	-16.8957
chr2	132077735	132078640	protein_coding	Pcna	exon	ENSMUSG00000027342	ProperStrand	25	chr4	131865868	131865948	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.2649
chr13	23636436	23636516	protein_coding	Hist1h3f	exon	ENSMUSG00000059309	ProperStrand	26	chr16	23110870	23110960	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-3.8812
chr13	96247406	96248477	protein_coding	S100z	exon	ENSMUSG00000021679	NonProperStrand	43	chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	1	-12.1065
chr11	117624464	117624488	protein_coding	Tnrc6c	utr3	ENSMUSG00000025571	ProperStrand	51	chr8	47294528	47294640	protein_coding	Slc25a4	exon	ENSMUSG00000031633	ProperStrand	53	1	-13.8890
chr4	149092927	149093007	protein_coding	Tmem201	exon	ENSMUSG00000044700	ProperStrand	60	chr2	26494708	26494798	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.1070
chr16	13390054	13390071	protein_coding	Mkl2	intron	ENSMUSG00000009569	ProperStrand	55	chr1	162966813	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-6.4309
chr9	72950387	72950438	protein_coding	2410004A20Rik	exon	ENSMUSG00000092622	ProperStrand	6	chr2	26494708	26494808	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	4	-18.9321
chrX	20255852	20256558	protein_coding	Uba1	exon	ENSMUSG00000001924	ProperStrand	156	chr1	162967530	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-1.8334
chr2	117004899	117004938	protein_coding	Spred1	utr3	ENSMUSG00000027351	ProperStrand	36	chr5	108501955	108501981	protein_coding	Mtf2	utr5	ENSMUSG00000029267	ProperStrand	39	1	-15.2029
chr10	90581034	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	chr9	15117065	15117106	snoRNA	ENSMUSG00000077614_SNORA40	.	ENSMUSG00000077614	ProperStrand	54	4	-15.6153
chr19	44188386	44188406	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr7	116664819	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	7	-0.8070
chr17	31722744	31722760	protein_coding	Pknox1	intron	ENSMUSG00000006705	ProperStrand	110	chr19	8799829	8799892	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-3.7954
chr7	52381981	52382081	protein_coding-noncoding	Rpl13a	utr3	ENSMUSG00000074129	ProperStrand	106	chr7	150717299	150717369	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-4.4086
chr7	26499390	26499490	protein_coding	Ccdc97	exon	ENSMUSG00000002608	ProperStrand	10	chr10	23506278	23506321	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-10.5947
chr8	64017612	64028375	protein_coding	Palld	exon	ENSMUSG00000058056	NonProperStrand	125	chr10	90644839	90644901	tRNA	tRNA856-AspGTC	.	1631192	ProperStrand	65	1	-11.6786
chr9	59161014	59161580	protein_coding	Adpgk	exon	ENSMUSG00000025236	ProperStrand	19	chr14	76247752	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	6	-20.4570
chr16	49004541	49005844	protein_coding	C330027C09Rik	exon	ENSMUSG00000033031	ProperStrand	30	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-6.7134
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr11	36140937	36140955	protein_coding	Odz2	intron	ENSMUSG00000049336	ProperStrand	106	1	-10.2273
chr4	150538028	150538044	protein_coding	Camta1	exon	ENSMUSG00000014592	ProperStrand	170	chr2	110572022	110572039	protein_coding	Muc15	exon	ENSMUSG00000050808	ProperStrand	1	1	-inf
chr2	62518351	62518367	protein_coding	Gca	intron	ENSMUSG00000026893	ProperStrand	8	chr1	162966813	162966859	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-10.3686
chr2	152163523	152163539	protein_coding	Trib3	utr3	ENSMUSG00000032715	NonProperStrand	46	chr4	131908357	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.8186
chr2	157588523	157588545	protein_coding	Ctnnbl1	intron	ENSMUSG00000027649	ProperStrand	26	chr4	32854138	32854943	protein_coding	Mdn1	exon	ENSMUSG00000058006	ProperStrand	184	1	-12.7580
chr10	75398717	75399040	protein_coding	Chchd10	exon	ENSMUSG00000049422	ProperStrand	140	chr17	39985458	39985500	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	6	-19.4277
chr13	21272317	21272443	protein_coding	Trim27	utr5	ENSMUSG00000021326	ProperStrand	28	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-10.1299
chrX	45631652	45631680	protein_coding	Utp14a	exon	ENSMUSG00000063785	ProperStrand	22	chr17	24857717	24857807	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.1130
chr17	37091387	37091424	protein_coding	Znrd1	utr3	ENSMUSG00000036315	ProperStrand	10	chr8	73419657	73419705	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-6.6208
chr3	152450608	152450627	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	chr15	79908932	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-1.4693
chr11	70463386	70463424	protein_coding-noncoding	Rnf167	utr5	ENSMUSG00000040746	ProperStrand	11	chr10	23505187	23505268	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-10.3969
chr12	31967580	31970491	protein_coding	Lamb1	exon	ENSMUSG00000002900	ProperStrand	87	chr16	23111690	23111753	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-2.5597
chr17	56235640	56236301	protein_coding	Hdgfrp2	exon	ENSMUSG00000002833	ProperStrand	36	chr11	69481369	69481459	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-6.9722
chr14	65372821	65372889	snoRNA	ENSMUSG00000064442_SNORA36	.	ENSMUSG00000064442	ProperStrand	296	chr3	68889064	68889164	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-0.7974
chr7	13614913	13615083	protein_coding	Trim28	exon	ENSMUSG00000005566	ProperStrand	296	chr11	60522941	60523021	protein_coding	Llgl1	exon	ENSMUSG00000020536	ProperStrand	20	1	-12.3414
chr8	24558060	24558114	protein_coding	Sfrp1	utr3	ENSMUSG00000031548	ProperStrand	22	chr11	69483155	69483245	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.2846
chr9	43615063	43615143	protein_coding	Pvrl1	utr3	ENSMUSG00000032012	ProperStrand	45	chr9	59518301	59518391	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	1	-7.7529
chr11	59774968	59774985	protein_coding	Med9	utr3	ENSMUSG00000061650	ProperStrand	3	chr5	108334228	108334284	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	2	-18.1969
chr18	36564081	36564100	protein_coding	Pfdn1	exon	ENSMUSG00000024346	ProperStrand	12	chr8	129468741	129468841	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-7.6151
chr16	23110464	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	chr6	125071741	125071873	snoRNA	ENSMUSG00000088208_SCARNA11	.	ENSMUSG00000088208	ProperStrand	113	10	-inf
chr14	21915043	21915060	protein_coding	Adk	intron	ENSMUSG00000039197	ProperStrand	32	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-4.9294
chr16	20499129	20499155	protein_coding	Eif2b5	exon	ENSMUSG00000003235	ProperStrand	38	chr9	120039570	120039622	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-4.1704
chr19	6368374	6371279	protein_coding	Sf1	exon	ENSMUSG00000024949	ProperStrand	251	chr19	8799583	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	15	-inf
chr18	82662186	82662202	protein_coding	Mbp	intron	ENSMUSG00000041607	NonProperStrand	185	chr19	8963120	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-0.6940
chr17	33915955	33916035	protein_coding-noncoding	Angptl4	utr3	ENSMUSG00000002289	ProperStrand	1	chr17	33915850	33915940	protein_coding	Angptl4	intron	ENSMUSG00000002289	ProperStrand	21	1	-inf
chr11	116535464	116535531	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr19	9947234	9947292	protein_coding	Incenp	exon	ENSMUSG00000024660	ProperStrand	111	4	-14.7934
chr18	7462559	7462580	protein_coding	Mpp7	intron	ENSMUSG00000057440	ProperStrand	7	chr2	26768368	26768433	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	2	-15.9876
chr18	67841178	67841194	protein_coding	Ptpn2	exon	ENSMUSG00000024539	ProperStrand	35	chr11	106362640	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-8.4848
chr8	109188156	109188246	protein_coding	Cdh1	exon	ENSMUSG00000000303	ProperStrand	283	chr2	29849429	29849714	protein_coding	Spna2	exon	ENSMUSG00000057738	ProperStrand	222	1	-7.5910
chr7	29136547	29136647	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	chr2	18508668	18508716	tRNA	tRNA1947-AsnGTT	.	101450	ProperStrand	179	2	-1.6125
chr3	67161283	67161299	protein_coding	Rsrc1	utr3	ENSMUSG00000034544	NonProperStrand	71	chr4	131865856	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.5136
chr9	103248134	103249018	protein_coding	Topbp1	exon	ENSMUSG00000032555	ProperStrand	81	chr8	73419688	73419778	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.6006
chr2	29781481	29781571	protein_coding	Odf2	exon	ENSMUSG00000026790	ProperStrand	58	chr2	26493405	26493485	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-3.8057
chr6	115757992	115758092	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr1	162966221	162966269	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	2	-1.4330
chr3	55013583	55013683	protein_coding	Sohlh2	utr3	ENSMUSG00000027794	ProperStrand	11	chr16	23110963	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.6241
chr10	59754508	59755325	protein_coding	Psap	exon	ENSMUSG00000004207	ProperStrand	124	chr7	118219574	118219616	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-2.8407
chr16	21218194	21218274	protein_coding	Ephb3	exon	ENSMUSG00000005958	ProperStrand	23	chr17	46873035	46873058	protein_coding	Cnpy3	utr3	ENSMUSG00000023973	ProperStrand	85	1	-14.5506
chr11	118900007	118900026	protein_coding	Cbx8	exon	ENSMUSG00000025578	ProperStrand	95	chr14	76247737	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-3.3185
chr19	30650449	30650468	protein_coding	Prkg1	intron	ENSMUSG00000052920	NonProperStrand	41	chr5	74489595	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-4.4991
chr16	84863340	84863430	protein_coding	Gabpa	utr3	ENSMUSG00000008976	NonProperStrand	4	chr11	69481336	69481427	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	NonProperStrand	24	1	-20.7136
chr8	125098881	125099082	protein_coding	Aprt	exon	ENSMUSG00000006589	ProperStrand	20	chr16	23111784	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-9.5660
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr18	82662186	82662202	protein_coding	Mbp	intron	ENSMUSG00000041607	NonProperStrand	185	1	-6.3566
chr1	107723787	107723803	protein_coding	Tnfrsf11a	exon	ENSMUSG00000026321	ProperStrand	6	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	5	-19.1229
chr18	6209036	6241383	protein_coding	Kif5b	utr5	ENSMUSG00000006740	ProperStrand	65	chr16	23110838	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-2.0526
chr7	87226112	87226146	protein_coding	Zfp710	exon	ENSMUSG00000048897	ProperStrand	229	chr19	8800365	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-1.3110
chr9	71499122	71503118	protein_coding	Cgnl1	exon	ENSMUSG00000032232	ProperStrand	46	chr17	24857717	24857797	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.7531
chr14	21541404	21541504	protein_coding	2310021P13Rik	exon	ENSMUSG00000021819	ProperStrand	11	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-9.2969
chr2	30828567	30828602	protein_coding	BC005624	utr3	ENSMUSG00000026851	ProperStrand	1	chr16	23110967	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr1	11643468	11643485	protein_coding	A830018L16Rik	intron	ENSMUSG00000057715	ProperStrand	7	chr1	89493385	89493402	protein_coding	Neu2	exon	ENSMUSG00000079434	ProperStrand	6	1	-19.4524
chr14	20641791	20641821	protein_coding	2700060E02Rik	exon	ENSMUSG00000021807	ProperStrand	43	chr4	131908689	131908722	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.7076
chr2	3413879	3413903	protein_coding	Hspa14	exon	ENSMUSG00000051396	ProperStrand	23	chr8	129468799	129468877	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	5	-19.1397
mmu-miR-5100	5	20	miRNA	mmu-miR-5100	.	mmu-miR-5100	ProperStrand	132	chr14	33005161	33005237	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-2.5685
chr1	172640115	172640132	protein_coding	Atf6	exon	ENSMUSG00000026663	NonProperStrand	2	chr1	162965979	162966006	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-10.9191
chr10	86156188	86156668	protein_coding	Hsp90b1	exon	ENSMUSG00000020048	ProperStrand	396	chr9	120037963	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-1.4230
chr17	56556339	56556356	protein_coding	Ptprs	exon	ENSMUSG00000013236	ProperStrand	152	chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	1	-6.9392
chr7	25756782	25756837	protein_coding	Rabac1	exon	ENSMUSG00000003380	ProperStrand	19	chr9	120037898	120037923	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-6.9787
chr15	81560306	81560322	protein_coding	Rangap1	utr5	ENSMUSG00000022391	NonProperStrand	35	chr7	38468013	38468033	protein_coding	Zfp536	intron	ENSMUSG00000043456	ProperStrand	57	1	-14.4993
chr7	127987285	128001859	protein_coding	Eef2k	utr5	ENSMUSG00000035064	NonProperStrand	31	chr9	15118245	15118271	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-4.7160
chr13	45011826	45011869	protein_coding	Jarid2	exon	ENSMUSG00000038518	ProperStrand	372	chr2	118753483	118753551	protein_coding	Chst14	utr3	ENSMUSG00000074916	ProperStrand	32	27	-19.6603
chr2	90235294	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	122678752	122689941	protein_coding	Slc2a3	utr3	ENSMUSG00000003153	ProperStrand	682	5	-4.4975
chr6	71071870	71071888	LINE	L1MA8	L1	chr6L1MA871071845	ProperStrand	3	chr11	116404846	116404951	protein_coding	Ube2o	exon	ENSMUSG00000020802	ProperStrand	134	1	-18.0816
chr15	36538429	36538445	protein_coding	Pabpc1	utr5	ENSMUSG00000022283	ProperStrand	908	chrX	55285028	55285051	protein_coding	Zic3	exon	ENSMUSG00000067860	ProperStrand	21	1	-10.0023
chr7	36205275	36205292	protein_coding	Ccdc123	exon	ENSMUSG00000023072	NonProperStrand	5	chr5	130300460	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-12.2420
chr10	12642434	12642451	lincRNA	B230208H11Rik	exon	ENSMUSG00000085233	ProperStrand	21	chr8	73419656	73419712	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-8.4787
chr9	103401280	103401296	protein_coding	Tmem108	exon	ENSMUSG00000042757	NonProperStrand	323	chr8	126893806	126893822	protein_coding	Pgbd5	utr3	ENSMUSG00000050751	ProperStrand	20	1	-12.1678
chr7	95750668	95750768	SINE	B3A	B2	chr7B3A95750558	NonProperStrand	1	chr19	8799849	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-inf
chr1	88253288	88253313	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chr5	92485116	92485218	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	8	-19.6354
chr19	6058470	6058548	protein_coding	Fau	exon	ENSMUSG00000038274	ProperStrand	64	chr9	120038572	120038672	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.9240
chr10	57242763	57242809	protein_coding	Serinc1	exon	ENSMUSG00000019877	ProperStrand	22	chr11	62034356	62034468	protein_coding	Specc1	utr3	ENSMUSG00000042331	ProperStrand	11	3	-inf
chr2	26493366	26493474	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chrX	143918834	143918910	snoRNA	ENSMUSG00000084421_SNORA35	.	ENSMUSG00000084421	ProperStrand	293	2	-2.1998
chr11	116535915	116535982	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr2	144087328	144087429	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	4	-2.5299
chr19	44188364	44188450	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr1	24619315	24619368	protein_coding	Gm10222	exon	ENSMUSG00000067736	ProperStrand	42	2	-13.5479
chr17	66468411	66468427	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	chr18	73693107	73693133	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-2.3370
chr17	33783442	33783496	protein_coding	Hnrnpm	utr3	ENSMUSG00000059208	ProperStrand	56	chr2	158182156	158182199	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	2	-8.4556
chr15	72933304	72933323	protein_coding	Eif2c2	utr3	ENSMUSG00000036698	NonProperStrand	3	chr8	59991514	59991909	protein_coding	Hmgb2	exon	ENSMUSG00000054717	ProperStrand	184	1	-17.5243
chr13	58400751	58400770	protein_coding	Kif27	intron	ENSMUSG00000060176	ProperStrand	75	chr11	62416600	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-4.7351
chr19	4192865	4193110	protein_coding	Ppp1ca	exon	ENSMUSG00000040385	ProperStrand	40	chr5	87518463	87518482	protein_coding	Ugt2b36	exon	ENSMUSG00000070704	NonProperStrand	10	10	-inf
chr5	122923250	122939281	protein_coding	Atp2a2	exon	ENSMUSG00000029467	ProperStrand	166	chr8	98269998	98270088	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-3.6022
chr13	9833552	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr10	70793817	70793837	protein_coding	Cisd1	exon	ENSMUSG00000037710	ProperStrand	3	1	-11.2562
chr8	41666834	41666887	protein_coding	Mtmr7	exon	ENSMUSG00000039431	ProperStrand	40	chr16	23111416	23111448	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.8604
chr1	178686609	178686708	protein_coding	Cep170	exon	ENSMUSG00000057335	ProperStrand	21	chr15	34370545	34370584	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-5.5683
chr10	90432659	90432677	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	chr2	102290960	102290977	protein_coding	Fjx1	exon	ENSMUSG00000075012	ProperStrand	13	1	-13.7334
chr9	35075646	35075990	protein_coding	Rpusd4	exon	ENSMUSG00000032044	ProperStrand	9	chr19	8963027	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.8692
chr2	32818830	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	chr3	153574589	153574632	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	5	-10.3152
chr6	124864464	124864695	protein_coding	Ptms	exon	ENSMUSG00000030122	ProperStrand	21	chr9	15119686	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.5745
chr8	86464609	86464699	protein_coding	Lphn1	utr3	ENSMUSG00000013033	ProperStrand	221	chr3	68889056	68889136	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-1.1558
chr9	83678799	83681879	protein_coding	Elovl4	exon	ENSMUSG00000032262	ProperStrand	159	chr6	124665421	124665521	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	1	-5.0236
chr11	113523870	113523887	protein_coding	Cog1	utr3	ENSMUSG00000018661	ProperStrand	51	chr1	141636151	141636167	protein_coding	Gm4788	exon	ENSMUSG00000070594	ProperStrand	1	1	-inf
chr19	5796482	5796506	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr7	38354919	38354935	protein_coding	Zfp536	exon	ENSMUSG00000043456	NonProperStrand	236	1	-4.8573
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr15	81937523	81937539	protein_coding	Mei1	exon	ENSMUSG00000068117	ProperStrand	53	1	-7.9876
chr17	6232006	6232022	protein_coding	Tulp4	exon	ENSMUSG00000034377	NonProperStrand	265	chr4	131865855	131865930	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-0.8746
chr1	127331406	127331423	protein_coding	Actr3	intron	ENSMUSG00000026341	NonProperStrand	4	chr11	69481333	69481431	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-8.6916
chr15	98350187	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	chr8	97227599	97227618	tRNA	tRNA414-LeuCAG	.	277631	ProperStrand	4	4	-inf
chr13	113869363	113869380	protein_coding	Cdc20b	intron	ENSMUSG00000078926	NonProperStrand	16	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-8.4953
chr12	87629782	87629799	protein_coding	1700020O03Rik	utr3	ENSMUSG00000021254	NonProperStrand	3	chr5	108334195	108334249	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-11.1157
chr17	39985129	39985674	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr5	115939521	115939612	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	2	-2.2118
chr16	23110991	23111010	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr8	129468784	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-0.8807
chr4	154346684	154346731	protein_coding	Pank4	intron	ENSMUSG00000029056	ProperStrand	15	chr11	87172190	87172206	protein_coding	Ppm1e	exon	ENSMUSG00000046442	ProperStrand	112	1	-14.8876
chr17	45705963	45705979	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr13	90238598	90238721	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	12	-inf
chr7	4762133	4762171	protein_coding	Ube2s	exon	ENSMUSG00000060860	ProperStrand	62	chr2	26768049	26768117	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	2	-13.2638
chr2	26493428	26494863	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr18	35102297	35102367	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	2	-1.2018
chr7	142888445	142888499	protein_coding	Mki67	exon	ENSMUSG00000031004	ProperStrand	286	chr4	41150096	41150130	snoRNA	ENSMUSG00000089265_SNORD121A	.	ENSMUSG00000089265	ProperStrand	370	1	-6.5610
chr11	5772687	5772758	protein_coding	Pold2	exon	ENSMUSG00000020471	ProperStrand	58	chr10	23505152	23505215	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	6	-9.4445
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr11	62418013	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-1.3887
chr12	32889918	32889935	protein_coding	Pik3cg	exon	ENSMUSG00000020573	NonProperStrand	4	chr2	26494708	26494760	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-8.5876
chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	chr2	30908554	30908604	protein_coding	Fnbp1	exon	ENSMUSG00000075415	ProperStrand	53	1	-7.2299
chr3	85942725	85942807	protein_coding	Rps3a	intron	ENSMUSG00000028081	ProperStrand	177	chr11	62416599	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-3.1341
chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	chr19	8799581	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-2.3392
chr16	19883899	19883915	protein_coding	A930003A15Rik	exon	ENSMUSG00000075330	ProperStrand	93	chr11	62416951	62417027	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	2	-8.5212
chr19	4007772	4007804	protein_coding	Ndufv1	exon	ENSMUSG00000037916	ProperStrand	7	chr19	8800356	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-7.8093
chr6	83067021	83067101	protein_coding	Mogs	exon	ENSMUSG00000030036	ProperStrand	14	chr3	123210877	123210983	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	10	-22.6212
chr3	136526736	136526753	protein_coding	Ppp3ca	intron	ENSMUSG00000028161	NonProperStrand	120	chr4	116828379	116828453	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-7.0020
chr13	55551706	55551728	protein_coding	Grk6	exon	ENSMUSG00000074886	ProperStrand	13	chr11	97642982	97643072	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	6	-inf
chr9	78326509	78326582	protein_coding	Eef1a1	utr3	ENSMUSG00000037742	ProperStrand	1990	chr9	7791368	7791384	protein_coding	Tmem123	exon	ENSMUSG00000050912	ProperStrand	17	1	-8.8712
chr2	129998665	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr2	144087379	144087443	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	2	-3.2323
chr4	76614453	76614470	protein_coding	Ptprd	intron	ENSMUSG00000028399	ProperStrand	198	chr16	23110526	23110574	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-0.7405
chr13	9833551	9833688	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr9	123760677	123760693	protein_coding	Fyco1	utr5	ENSMUSG00000025241	ProperStrand	31	2	-10.1629
chr13	9833580	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr9	110255590	110264909	protein_coding	Scap	exon	ENSMUSG00000032485	ProperStrand	37	4	-17.7747
chr11	96772917	96772997	protein_coding	Cdk5rap3	exon	ENSMUSG00000018669	ProperStrand	16	chr4	122968627	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	2	-14.2587
chr19	53994314	53995747	protein_coding	Pdcd4	exon	ENSMUSG00000024975	ProperStrand	21	chrX	34622945	34623035	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	6	-19.5353
chr15	54293942	54293959	protein_coding	Colec10	exon	ENSMUSG00000038591	NonProperStrand	3	chr7	27466699	27466715	protein_coding	Cyp2b23	exon	ENSMUSG00000040650	ProperStrand	39	3	-inf
chrX	47140624	47140640	protein_coding	Igsf1	exon	ENSMUSG00000031111	NonProperStrand	3	chr15	34370618	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-9.7644
chr15	85057434	85057459	protein_coding	Fbln1	exon	ENSMUSG00000006369	ProperStrand	32	chr9	15119631	15119744	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	7	-20.9333
chr8	122465960	122470996	protein_coding	Usp10	exon	ENSMUSG00000031826	ProperStrand	98	chr8	73419662	73419729	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.2775
chr12	32675263	32675284	protein_coding	Prkar2b	intron	ENSMUSG00000002997	ProperStrand	6	chr8	73419657	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-7.7047
chr15	16104199	16104279	LINE	Lx3_Mus	L1	chr15Lx3_Mus16104118	ProperStrand	1	chr15	16103861	16103951	LTR	RLTR10	ERVK	chr15RLTR1016103749	ProperStrand	1	1	-inf
chr17	23957974	23960043	protein_coding	Srrm2	utr3	ENSMUSG00000039218	ProperStrand	521	chr18	35714200	35714290	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	4	-2.3233
chr14	66342756	66342772	protein_coding	Scara5	intron	ENSMUSG00000022032	ProperStrand	30	chr15	82980190	82980224	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-8.5292
chr17	35296089	35296126	protein_coding	Prrc2a	exon	ENSMUSG00000024393	ProperStrand	315	chr15	91403505	91403521	protein_coding	Slc2a13	utr5	ENSMUSG00000036298	ProperStrand	22	1	-12.0222
chr4	131865855	131865914	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr5	125885960	125886055	tRNA	tRNA1316-AspGTC	.	1417258	ProperStrand	8	1	-5.4974
chr11	3317610	3317636	protein_coding	Rnf185	utr3	ENSMUSG00000020448	ProperStrand	12	chr9	15118334	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-6.6107
chr5	141236581	141236696	protein_coding	Gna12	exon	ENSMUSG00000000149	ProperStrand	54	chr1	191058375	191058392	protein_coding	Kcnk2	intron	ENSMUSG00000037624	ProperStrand	56	1	-13.6630
chr11	20126049	20126076	protein_coding	Rab1	utr3	ENSMUSG00000020149	ProperStrand	32	chr11	69483190	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	5	-15.3206
chr16	57391760	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr8	73201933	73201971	protein_coding	Lsm4	exon	ENSMUSG00000031848	ProperStrand	19	2	-16.0200
chr19	44380063	44380153	protein_coding	Scd2	utr3	ENSMUSG00000025203	ProperStrand	219	chr7	30231512	30231592	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	2	-10.1588
chr2	32818158	32818191	protein_coding	Rpl12	exon	ENSMUSG00000038900	ProperStrand	167	chr2	29866717	29866807	protein_coding	Spna2	exon	ENSMUSG00000057738	ProperStrand	222	1	-8.6396
chr12	86474550	86474603	protein_coding	Dlst	utr3	ENSMUSG00000004789	ProperStrand	52	chr16	23111394	23111484	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.4615
chrX	90540039	90540055	protein_coding	Arx	exon	ENSMUSG00000035277	ProperStrand	5	chr16	23110476	23110529	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-7.3464
chr5	74489202	74489228	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr19	25117397	25117414	protein_coding	Dock8	intron	ENSMUSG00000052085	NonProperStrand	6	1	-10.3398
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr6	113344842	113344995	protein_coding	Ttll3	exon	ENSMUSG00000030276	ProperStrand	17	1	-15.7181
chr5	125509096	125509112	protein_coding	Ncor2	exon	ENSMUSG00000029478	NonProperStrand	20	chr11	57873764	57873780	protein_coding	Larp1	utr3	ENSMUSG00000037331	ProperStrand	201	1	-13.1160
chr11	115384796	115384858	protein_coding	Sumo2	utr3	ENSMUSG00000020738	ProperStrand	24	chr2	41199971	41199989	protein_coding	Lrp1b	exon	ENSMUSG00000049252	ProperStrand	376	1	-11.4904
chr11	3545088	3545116	lincRNA	Tug1	exon	ENSMUSG00000056579	ProperStrand	15	chr4	131908356	131908404	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.7937
chr1	23822898	23822988	protein_coding	B3gat2	intron	ENSMUSG00000026156	NonProperStrand	5	chr5	35042376	35042456	protein_coding	Grk4	utr3	ENSMUSG00000052783	ProperStrand	15	1	-20.1544
chr18	24363855	24363872	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr9	120038564	120038635	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.4519
chr14	91400953	91401043	LINE	L1M4	L1	chr14L1M491400864	ProperStrand	1	chr14	91401339	91401419	LINE	Lx2	L1	chr14Lx291401334	ProperStrand	1	1	-inf
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr19	8799835	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	2	-1.0995
chr19	8755583	8755599	protein_coding	Chrm1	utr3	ENSMUSG00000032773	NonProperStrand	2	chr7	29757585	29757652	protein_coding	Eif3k	exon	ENSMUSG00000053565	ProperStrand	31	1	-inf
chr2	25915656	25915672	protein_coding	Nacc2	exon	ENSMUSG00000026932	ProperStrand	98	chr11	116938715	116938750	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	2	-8.5400
chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	chr8	98270015	98270096	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	3	-4.3380
chr12	77811472	77811488	protein_coding	Spnb1	utr5	ENSMUSG00000021061	NonProperStrand	37	chr9	40612874	40612921	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	1	-10.5179
chr7	135123652	135123676	protein_coding	Fus	exon	ENSMUSG00000030795	ProperStrand	162	chr9	120038616	120038672	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.4160
chr15	41394076	41394095	protein_coding	Oxr1	intron	ENSMUSG00000022307	NonProperStrand	12	chr17	24857717	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-5.3067
chr11	59025826	59026717	protein_coding	Arf1	exon	ENSMUSG00000048076	ProperStrand	52	chr1	162967512	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-6.3314
chr13	98279234	98279287	LTR	RLTR20D	ERVK	chr13RLTR20D98279249	NonProperStrand	15	chr1	88426120	88426548	protein_coding	Ptma	exon	ENSMUSG00000026238	ProperStrand	385	15	-inf
chr14	55189343	55190615	protein_coding	Jub	exon	ENSMUSG00000022178	ProperStrand	25	chr7	116663634	116663724	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.1077
chr11	57310020	57310073	protein_coding	Fam114a2	intron	ENSMUSG00000020523	ProperStrand	25	chr2	158182156	158182201	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	2	-10.8979
chr9	58438155	58438245	protein_coding	Nptn	intron	ENSMUSG00000032336	ProperStrand	25	chr4	131865852	131865978	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	5	-14.4594
chr11	78138315	78138572	protein_coding	Aldoc	exon	ENSMUSG00000017390	ProperStrand	4	chr4	131908689	131908750	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-10.6778
chr2	158588683	158588713	protein_coding	Ppp1r16b	utr3	ENSMUSG00000037754	ProperStrand	4	chr10	110918525	110918634	protein_coding	Nap1l1	intron	ENSMUSG00000058799	ProperStrand	185	2	-19.6550
chr18	42805538	42805554	protein_coding	Ppp2r2b	exon	ENSMUSG00000024500	NonProperStrand	95	chr2	57090809	57090827	protein_coding	Gpd2	utr5	ENSMUSG00000026827	ProperStrand	93	1	-11.5093
chr13	9833568	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr16	87419193	87419262	snoRNA	ENSMUSG00000065647_SNORA2	.	ENSMUSG00000065647	ProperStrand	123	1	-3.5960
chr2	26493452	26493517	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr9	64024530	64024567	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	1	-1.6910
chr2	25200589	25207380	protein_coding	Man1b1	utr3	ENSMUSG00000036646	ProperStrand	57	chr16	23110852	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	9	-9.2110
chr3	89010119	89010203	protein_coding	Gba	exon	ENSMUSG00000028048	ProperStrand	4	chr17	24374110	24374130	protein_coding	Ccnf	exon	ENSMUSG00000072082	ProperStrand	149	4	-inf
chr16	22054614	22054704	LINE	Lx9	L1	chr16Lx922054219	NonProperStrand	1	chr5	121655023	121655103	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-inf
chr11	4668011	4668084	protein_coding	Nf2	utr3	ENSMUSG00000009073	ProperStrand	72	chr4	116826700	116826766	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-6.4205
chr18	57549053	57549088	protein_coding	Prrc1	utr3	ENSMUSG00000024594	ProperStrand	22	chr3	153573528	153573583	snoRNA	ENSMUSG00000064731_Snord45b	.	ENSMUSG00000064731	ProperStrand	205	1	-12.8834
chr11	78088367	78088586	protein_coding	2610507B11Rik	exon	ENSMUSG00000010277	ProperStrand	246	chr1	162965994	162966040	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-1.2674
chr16	18136241	18136264	protein_coding	Rtn4r	intron	ENSMUSG00000043811	NonProperStrand	6	chr7	118219582	118219640	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	4	-19.1789
chr5	46036196	46036213	lincRNA	9630001P10Rik	exon	ENSMUSG00000085726	NonProperStrand	2	chr4	137070669	137071295	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	1	-15.5864
chr11	97079912	97079935	protein_coding	Npepps	exon	ENSMUSG00000001441	ProperStrand	30	chr7	4788251	4788272	protein_coding	Shisa7	exon	ENSMUSG00000053550	NonProperStrand	4	1	-inf
chr5	90733029	90733083	protein_coding	Ankrd17	exon	ENSMUSG00000055204	ProperStrand	77	chr18	35716831	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	5	-9.1514
chr4	116826698	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	chr7	16524123	16524213	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	1	-3.3392
chr3	95648914	95648963	protein_coding	Prpf3	exon	ENSMUSG00000015748	ProperStrand	29	chr10	39978360	39978450	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	6	-20.9667
chr4	41326005	41326115	protein_coding	Ubap1	exon	ENSMUSG00000028437	ProperStrand	9	chr11	99194952	99194968	protein_coding	Krt26	exon	ENSMUSG00000075570	ProperStrand	8	1	-18.7584
chrX	47915377	47915416	lincRNA	6720401G13Rik	intron	ENSMUSG00000085396	ProperStrand	34	chr4	131908689	131908722	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.0811
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr9	21146701	21146888	protein_coding	Slc44a2	exon	ENSMUSG00000057193	ProperStrand	26	1	-8.0413
chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	chr1	194571822	194571881	snRNA	ENSMUSG00000064881_U5	.	ENSMUSG00000064881	ProperStrand	187	1	-4.7596
chr9	59523499	59526727	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr17	35089180	35089253	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	2	-1.0917
chr4	50284542	50284622	LINE	Lx4B	L1	chr4Lx4B50284488	ProperStrand	1	chr4	50284239	50284329	LINE	Lx6	L1	chr4Lx650284155	ProperStrand	1	1	-inf
chr8	39022685	39276352	protein_coding	Sgcz	intron	ENSMUSG00000039539	NonProperStrand	14	chr11	6428076	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-9.8477
chr11	75310578	75313402	protein_coding	Prpf8	utr3	ENSMUSG00000020850	ProperStrand	255	chr3	85943020	85943070	protein_coding	Rps3a	exon	ENSMUSG00000028081	ProperStrand	177	1	-8.2480
chr4	131908360	131908460	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr13	22011134	22011168	tRNA	tRNA86-SerAGA	.	1606951	ProperStrand	33	1	-8.4576
chr7	59239201	59239223	protein_coding	Gas2	intron	ENSMUSG00000030498	ProperStrand	10	chr8	73419657	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-10.8388
chr19	42225881	42225897	protein_coding	Marveld1	utr3	ENSMUSG00000044345	NonProperStrand	112	chr7	29678791	29678838	protein_coding	Actn4	utr3	ENSMUSG00000054808	ProperStrand	120	2	-16.8044
mmu-miR-292a-3p	0	24	miRNA	mmu-miR-292a-3p	.	mmu-miR-292a-3p	ProperStrand	38	chr2	130109497	130109513	protein_coding	Idh3b	exon	ENSMUSG00000027406	ProperStrand	146	1	-12.4512
chr1	133141328	133141345	protein_coding	Rassf5	exon	ENSMUSG00000026430	ProperStrand	73	chr1	162967520	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-3.1178
chr3	88262516	88262537	protein_coding	Sema4a	intron	ENSMUSG00000028064	ProperStrand	4	chr5	108334210	108334242	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	2	-16.9126
chr5	42136455	42136473	Low_complexity	GA-rich	Low_complexity	chr5GA-rich42136449	NonProperStrand	106	chr10	80291645	80291745	protein_coding	Oaz1	exon	ENSMUSG00000035242	ProperStrand	49	1	-12.5795
chr13	85145171	85145261	LINE	L1VL1	L1	chr13L1VL185144018	ProperStrand	1	chr13	81384864	81384954	protein_coding	Gpr98	intron	ENSMUSG00000069170	ProperStrand	16	1	-inf
chr19	38869531	38869547	protein_coding	Noc3l	exon	ENSMUSG00000024999	NonProperStrand	149	chr5	151755614	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-5.9398
chr2	90235299	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr16	4886395	4886411	protein_coding	Mgrn1	exon	ENSMUSG00000022517	NonProperStrand	157	2	-4.7070
chr17	50428553	50432804	protein_coding	Dazl	utr5	ENSMUSG00000010592	ProperStrand	10	chr16	23111693	23111783	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-8.7017
chr18	36961558	36961663	misc_RNA	Vault	.	ENSMUSG00000065145	ProperStrand	177	chr16	24984504	24984520	protein_coding	Lpp	utr3	ENSMUSG00000033306	NonProperStrand	189	1	-8.8444
chr2	26493391	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr16	32243795	32243826	snoRNA	ENSMUSG00000080440_SNORA79	.	ENSMUSG00000080440	ProperStrand	140	1	-4.5483
chr11	22736642	22736701	protein_coding	Commd1	utr3	ENSMUSG00000051355	ProperStrand	36	chr3	108163937	108164037	protein_coding	Sort1	utr3	ENSMUSG00000068747	ProperStrand	32	1	-15.6287
chr1	59539683	59539700	protein_coding	Fzd7	utr5	ENSMUSG00000041075	ProperStrand	373	chr2	130103751	130103798	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-4.8746
chr3	94167315	94167331	protein_coding	C2cd4d	utr5	ENSMUSG00000091648	ProperStrand	30	chr5	74489620	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-5.1050
chrX	20265655	20274071	protein_coding	Cdk16	exon	ENSMUSG00000031065	ProperStrand	30	chr2	26494698	26494788	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-7.3622
chr14	21327731	21327772	protein_coding	Ppp3cb	exon	ENSMUSG00000021816	ProperStrand	17	chr2	26494708	26494759	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.5152
chr8	26629874	26642784	protein_coding	Fgfr1	utr5	ENSMUSG00000091895	ProperStrand	16	chr7	118219582	118219662	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-6.7705
chr13	12507778	12508222	protein_coding	Heatr1	exon	ENSMUSG00000050244	ProperStrand	74	chr11	97642960	97643050	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.1210
chr4	131865923	131866013	lincRNA	Snhg12	exon	ENSMUSG00000086290	ProperStrand	178	chr4	131865853	131865966	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	7	-6.2898
chr1	88243901	88243937	protein_coding	Ncl	utr3	ENSMUSG00000026234	ProperStrand	1184	chr7	52382753	52382789	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-1.3623
chr3	20238638	20238656	protein_coding	Agtr1b	intron	ENSMUSG00000054988	NonProperStrand	39	chr19	8963031	8963084	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.0232
chr1	94847126	94847142	LTR	MLT1A0	MaLR	chr1MLT1A094847023	ProperStrand	1	chr1	89673604	89673694	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-inf
chr10	43299029	43299112	protein_coding	Cd24a	utr5	ENSMUSG00000047139	ProperStrand	4	chr16	23111455	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-6.3168
chr11	107722328	107722350	SINE	B3	B2	chr11B3107722217	NonProperStrand	2	chr2	26494766	26494879	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	2	-inf
chr5	34234245	34234262	protein_coding	Whsc1	utr5	ENSMUSG00000057406	ProperStrand	409	chr3	88497882	88497980	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	6	-18.8256
chrX	34667269	34667285	protein_coding	Nkap	exon	ENSMUSG00000016409	NonProperStrand	133	chr2	103880901	103880964	snoRNA	ENSMUSG00000087739_SCARNA21	.	ENSMUSG00000087739	ProperStrand	50	1	-12.0828
chr4	131908302	131908355	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	chr13	22003180	22003256	tRNA	tRNA84-AspGTC	.	1466922	ProperStrand	10	2	-7.7635
chr7	119253776	119253792	protein_coding	Usp47	utr3	ENSMUSG00000059263	ProperStrand	40	chr17	24856620	24856720	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-7.2336
chr7	120657374	120657390	protein_coding	Far1	utr5	ENSMUSG00000030759	ProperStrand	72	chr8	73419657	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-2.8058
chr19	8963029	8963187	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	chr1	9932548	9932626	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	10	-1.2773
chr2	119531299	119536710	protein_coding	Rtf1	exon	ENSMUSG00000027304	ProperStrand	12	chr16	23111694	23111774	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.8390
chr11	72553989	72554016	protein_coding	Ankfy1	exon	ENSMUSG00000020790	ProperStrand	68	chr17	24857717	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	4	-7.9001
chr6	88040033	88040078	protein_coding	Rpn1	exon	ENSMUSG00000030062	ProperStrand	58	chr4	131865894	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.8207
chr7	24779190	24779213	SINE	ID_B1	B4	chr7ID_B124779183	NonProperStrand	54	chrX	34667269	34667285	protein_coding	Nkap	exon	ENSMUSG00000016409	NonProperStrand	133	1	-11.9273
chr4	88922162	88922179	protein_coding	Cdkn2a	intron	ENSMUSG00000044303	ProperStrand	13	chr1	162965531	162965558	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-6.2408
chr2	90235319	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	54443336	54443423	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	3	-4.0893
chr8	98285329	98286913	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	chr5	143777466	143789642	protein_coding	Rnf216	exon	ENSMUSG00000045078	ProperStrand	38	1	-10.9112
chr18	56902936	56907641	protein_coding	Lmnb1	exon	ENSMUSG00000024590	ProperStrand	176	chr10	115874668	115874685	protein_coding	Kcnmb4	intron	ENSMUSG00000054934	NonProperStrand	11	1	-14.6141
chr12	88488443	88496424	protein_coding	Pomt2	exon	ENSMUSG00000034126	NonProperStrand	331	chr2	26767003	26767039	protein_coding	Rpl7a	exon	ENSMUSG00000062647	ProperStrand	234	1	-7.1766
chr4	132620465	132620542	protein_coding	Ahdc1	exon	ENSMUSG00000037692	ProperStrand	100	chr18	35716840	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.3821
chr5	106242127	106242147	protein_coding	Lrrc8d	exon	ENSMUSG00000046079	ProperStrand	40	chr4	131908687	131908778	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.8200
chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	chr2	32818803	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	2	-3.3211
chr1	152259116	152260049	protein_coding	Tpr	exon	ENSMUSG00000006005	ProperStrand	542	chr1	137641393	137641483	protein_coding	Csrp1	intron	ENSMUSG00000026421	ProperStrand	9	1	-12.7937
chrX	70922083	70922133	protein_coding	Slc6a8	exon	ENSMUSG00000019558	ProperStrand	47	chr7	148634765	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	5	-18.1529
chr4	116991019	116991036	protein_coding	Rnf220	intron	ENSMUSG00000028677	ProperStrand	131	chr11	77995189	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-4.6636
chr10	80993104	80993204	protein_coding	Gna11	utr3	ENSMUSG00000034781	ProperStrand	23	chr16	23111464	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-7.3487
chr1	158697575	158697591	LTR	ORR1A4	MaLR	chr1ORR1A4158697469	NonProperStrand	9	chr3	95980283	95980341	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-10.7261
chrX	50613089	50613437	protein_coding	Fam122b	exon	ENSMUSG00000036022	ProperStrand	20	chr15	34370545	34370635	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-5.6655
chr10	77519606	77520019	protein_coding	Dnmt3l	exon	ENSMUSG00000000730	ProperStrand	37	chr5	121142239	121142257	protein_coding	Dtx1	intron	ENSMUSG00000029603	NonProperStrand	33	1	-15.4673
chr4	133249683	133249783	protein_coding	Arid1a	exon	ENSMUSG00000007880	ProperStrand	465	chr10	23506276	23506347	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	2	-5.2255
chr8	86424385	86424421	protein_coding	Lphn1	utr5	ENSMUSG00000013033	ProperStrand	221	chr19	8798751	8798812	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-2.4164
chr15	85692755	85692855	protein_coding	Gtse1	exon	ENSMUSG00000022385	ProperStrand	74	chr7	116663714	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-3.8718
chr14	87659491	87659512	LTR	MTEa	MaLR	chr14MTEa87659331	NonProperStrand	83	chr2	26494777	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.5364
chr11	86020717	86020772	antisense	4632419I22Rik	.	ENSMUSG00000085208	ProperStrand	33	chr11	97642952	97643034	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.5405
chr19	32464273	32464289	lincRNA	2700046G09Rik	exon	ENSMUSG00000024893	ProperStrand	59	chr2	165137140	165137168	protein_coding	Elmo2	exon	ENSMUSG00000017670	ProperStrand	14	1	-16.3279
chr5	145890980	145891043	protein_coding	Pdap1	utr3	ENSMUSG00000029623	ProperStrand	112	chr7	117166722	117166744	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	2	-6.1583
chr13	74494656	74494674	protein_coding	Ccdc127	utr3	ENSMUSG00000021578	NonProperStrand	54	chr16	23110470	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.6430
chr1	63492608	63492691	protein_coding	Adam23	utr5	ENSMUSG00000025964	ProperStrand	59	chr1	162966830	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-6.2921
chr16	50538625	50538646	lincRNA	G730013B05Rik	intron	ENSMUSG00000085617	ProperStrand	3	chr2	32818815	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-11.7908
chr10	62802344	62802360	protein_coding	Sirt1	intron	ENSMUSG00000020063	NonProperStrand	116	chr11	77996590	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-4.8081
chr8	60437139	60437157	protein_coding	Galntl6	exon	ENSMUSG00000061864	ProperStrand	44	chr5	74489633	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-4.3638
chr2	90235307	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	81919738	81919756	protein_coding	Lphn3	intron	ENSMUSG00000037605	NonProperStrand	39	1	-5.2962
chr15	36701031	36701057	protein_coding	Ywhaz	utr3	ENSMUSG00000022285	ProperStrand	73	chr3	153575089	153575113	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	1	-8.1030
chr11	62416575	62416600	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr16	23110509	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	4	-0.8670
chr16	33625246	33646649	protein_coding	Slc12a8	exon	ENSMUSG00000035506	ProperStrand	52	chr4	142719401	142719428	protein_coding	Prdm2	intron	ENSMUSG00000057637	ProperStrand	46	1	-14.1421
chr2	16602506	16602522	protein_coding	Plxdc2	intron	ENSMUSG00000026748	ProperStrand	9	chr2	26445942	26445964	protein_coding	Egfl7	exon	ENSMUSG00000026921	ProperStrand	44	1	-17.8306
chr7	52139554	52141260	protein_coding	Med25	exon	ENSMUSG00000002968	ProperStrand	33	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	7	-17.0798
chr6	28838397	28838460	protein_coding	Snd1	utr3	ENSMUSG00000001424	ProperStrand	210	chr19	8799026	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	4	-11.4785
chr18	67470330	67470409	protein_coding	Impa2	exon	ENSMUSG00000024525	ProperStrand	31	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-4.3850
chr15	100047319	100047402	protein_coding	Dip2b	utr3	ENSMUSG00000023026	ProperStrand	48	chr11	77996557	77996619	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	4	-18.4773
chr15	10965488	10965504	protein_coding	Rxfp3	utr3	ENSMUSG00000060735	ProperStrand	37	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-6.1613
chr11	77973124	77973224	protein_coding	Traf4	utr3	ENSMUSG00000017386	ProperStrand	34	chr19	8799859	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	7	-19.1851
chr11	114530245	114530269	protein_coding	Rpl38	exon	ENSMUSG00000057322	ProperStrand	29	chrX	58225380	58225396	pseudogene	Rpl7l1-ps1	.	ENSMUSG00000081323	ProperStrand	46	1	-15.3316
chr1	136252263	136257361	protein_coding	Tmem183a	exon	ENSMUSG00000042305	ProperStrand	10	chr15	34370545	34370626	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-7.0767
chr11	69548693	69554698	protein_coding	Polr2a	exon	ENSMUSG00000005198	ProperStrand	200	chr18	35714196	35714293	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	2	-2.6985
chr11	120134685	120134701	protein_coding	Bahcc1	exon	ENSMUSG00000039741	ProperStrand	118	chrX	84483702	84483718	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-6.9029
chr5	108109583	108109673	lincRNA	Gm17717	intron	ENSMUSG00000091666	NonProperStrand	2	chr2	130181957	130182047	protein_coding	Ebf4	intron	ENSMUSG00000053552	ProperStrand	4	1	-inf
chr1	88425798	88426653	protein_coding	Ptma	utr3	ENSMUSG00000026238	ProperStrand	385	chr10	23505152	23505278	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	8	-1.3672
chrX	72214248	72214264	protein_coding-noncoding	Gab3	utr3	ENSMUSG00000032750	ProperStrand	420	chr2	26286024	26286052	protein_coding	Sec16a	exon	ENSMUSG00000026924	ProperStrand	86	1	-8.6949
chr2	55289760	55289777	protein_coding	Kcnj3	exon	ENSMUSG00000026824	ProperStrand	6	chr2	146910901	146910919	protein_coding	Nkx2-4	exon	ENSMUSG00000054160	NonProperStrand	3	1	-inf
chr4	132530099	132530117	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	chr9	72594221	72594967	protein_coding	Nedd4	exon	ENSMUSG00000032216	ProperStrand	308	1	-6.3474
chr10	7398418	7398461	protein_coding	Nup43	exon	ENSMUSG00000040034	ProperStrand	7	chr16	23110967	23111010	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.4785
chr16	57133293	57133362	protein_coding	Tomm70a	exon	ENSMUSG00000022752	ProperStrand	82	chr11	62416627	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	3	-10.8892
chr16	93192527	93192546	SINE	RSINE1	B4	chr16RSINE193192531	ProperStrand	8	chr16	23110827	23110851	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.2180
chr11	116199150	116199168	protein_coding	Rnf157	utr3	ENSMUSG00000052949	ProperStrand	32	chr17	13112528	13112583	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-5.8052
chr17	66468411	66468427	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	chr17	35299507	35299561	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-1.7167
chr17	31722744	31722760	protein_coding	Pknox1	intron	ENSMUSG00000006705	ProperStrand	110	chr1	162965980	162965999	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-2.5211
chr6	47993905	47993997	protein_coding	Zfp777	exon	ENSMUSG00000071477	ProperStrand	11	chr11	77995189	77995233	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	2	-15.3288
chr2	24915691	24915707	protein_coding	Nelf	exon	ENSMUSG00000006476	ProperStrand	40	chr11	69163907	69163935	protein_coding	Chd3	intron	ENSMUSG00000018474	ProperStrand	438	1	-10.1492
chr3	6464942	6465032	LINE	L1_Mus1	L1	chr3L1_Mus16463232	ProperStrand	1	chr19	8032408	8032488	protein_coding	Slc22a27	intron	ENSMUSG00000067656	ProperStrand	1	1	-inf
chr16	4039189	4039206	protein_coding	Dnase1	exon	ENSMUSG00000005980	NonProperStrand	17	chr11	70465703	70465721	protein_coding	Pfn1	exon	ENSMUSG00000018293	ProperStrand	55	1	-16.0420
chr1	159816638	159816655	LTR	MLT1H2	MaLR	chr1MLT1H2159816576	ProperStrand	14	chr19	8963030	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.9719
chr17	68159307	68159411	protein_coding	Lama1	exon	ENSMUSG00000032796	ProperStrand	168	chr7	52715005	52715074	protein_coding	Ftl1	utr5	ENSMUSG00000050708	ProperStrand	807	2	-9.8599
chr11	31820420	31820510	protein_coding	Cpeb4	exon	ENSMUSG00000020300	ProperStrand	4	chr12	112779177	112779257	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-10.3781
chrX	159216630	159216687	protein_coding	Rbbp7	utr3	ENSMUSG00000031353	ProperStrand	48	chr9	15119646	15119714	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-7.7372
chr2	90235312	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr13	42276985	42277002	protein_coding	Hivep1	exon	ENSMUSG00000021366	ProperStrand	24	1	-6.2570
chr10	80797342	80797358	protein_coding	Tbxa2r	exon	ENSMUSG00000034881	NonProperStrand	40	chr5	121655031	121655129	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.5153
chr8	74147834	74147872	protein_coding	Glt25d1	utr3	ENSMUSG00000034807	ProperStrand	36	chr9	103401280	103401296	protein_coding	Tmem108	exon	ENSMUSG00000042757	NonProperStrand	323	1	-10.9709
chr6	47475794	47475812	protein_coding	Cul1	utr3	ENSMUSG00000029686	NonProperStrand	2	chr9	64143769	64143868	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-15.2418
chr4	107065821	107065854	protein_coding	Tmem48	intron	ENSMUSG00000028614	ProperStrand	42	chr2	26493366	26493473	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-4.4165
chr19	41841651	41841679	protein_coding	Arhgap19	utr3	ENSMUSG00000025154	ProperStrand	34	chr4	131866169	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-7.8780
chr4	138931880	138931965	protein_coding	C230096C10Rik	utr3	ENSMUSG00000078517	ProperStrand	69	chr4	131865916	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	5	-8.4066
chr15	75878673	75878747	protein_coding	Scrib	exon	ENSMUSG00000022568	ProperStrand	154	chr5	141377002	141377018	protein_coding	Card11	exon	ENSMUSG00000036526	ProperStrand	30	1	-12.8240
chr9	109988738	109988789	protein_coding	Dhx30	exon	ENSMUSG00000032480	ProperStrand	29	chr11	62416575	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	3	-15.1094
chr2	4803247	4803265	protein_coding	Sephs1	intron	ENSMUSG00000026662	ProperStrand	20	chr2	160191558	160191574	protein_coding	Mafb	exon	ENSMUSG00000074622	ProperStrand	31	1	-16.7624
chr10	85416222	85418537	protein_coding	D10Wsu52e	exon	ENSMUSG00000001783	ProperStrand	45	chr9	120039655	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.8509
chr11	5344505	5344521	protein_coding	Znrf3	exon	ENSMUSG00000041961	ProperStrand	63	chr19	8799829	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-4.8526
chr4	148748811	148748901	protein_coding	Ube4b	intron	ENSMUSG00000028960	ProperStrand	66	chr9	105987712	105987802	protein_coding	Col6a4	intron	ENSMUSG00000032572	NonProperStrand	5	1	-17.9842
chr3	85944541	85944584	snoRNA	ENSMUSG00000064390_Rnu73b	.	ENSMUSG00000064390	ProperStrand	164	chr3	68889030	68889130	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-1.5750
chr2	90235315	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr12	112997097	112997113	protein_coding	Klc1	utr5	ENSMUSG00000021288	ProperStrand	35	1	-5.5085
chr5	135857669	135857693	protein_coding	Pom121	exon	ENSMUSG00000053293	ProperStrand	127	chr11	69481387	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-1.9196
chr8	74490951	74491041	protein_coding	Zfp961	intron	ENSMUSG00000052446	ProperStrand	35	chr15	7146941	7146986	protein_coding	Lifr	utr3	ENSMUSG00000054263	ProperStrand	64	2	-19.1887
mmu-miR-6236	1	16	miRNA	mmu-miR-6236	.	mmu-miR-6236	ProperStrand	9	chr11	12151111	12151128	protein_coding	Cobl	exon	ENSMUSG00000020173	ProperStrand	133	1	-15.5747
chr9	77827653	77827732	protein_coding	Elovl5	exon	ENSMUSG00000032349	ProperStrand	32	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-8.2414
chr1	137995413	137995430	protein_coding	Cacna1s	intron	ENSMUSG00000026407	NonProperStrand	37	chr7	29136525	29136575	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.2150
chrX	98988361	98988382	antisense	Gm4779	.	ENSMUSG00000045010	ProperStrand	7	chr4	131908689	131908750	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.0493
chr13	114625674	114625764	protein_coding	Arl15	intron	ENSMUSG00000042348	ProperStrand	51	chr15	34370582	34370662	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-3.8514
chr17	4082197	4082229	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr15	79908959	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-2.3846
chr17	34333102	34333119	protein_coding	Tap1	intron	ENSMUSG00000037321	ProperStrand	6	chr3	123210923	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-6.4760
chr2	90235315	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	7359208	7359224	protein_coding	Mark2	exon	ENSMUSG00000024969	ProperStrand	75	1	-4.0395
chr18	14806275	14806337	snRNA	ENSMUSG00000065369_U1	.	ENSMUSG00000065369	ProperStrand	5	chr2	26493395	26493485	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-8.7753
chr10	89282078	89282096	protein_coding	Uhrf1bp1l	utr3	ENSMUSG00000019951	NonProperStrand	55	chr17	66217074	66234021	protein_coding	Ralbp1	utr5	ENSMUSG00000024096	ProperStrand	39	1	-14.3527
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr9	24549586	24549616	protein_coding	Tbx20	intron	ENSMUSG00000031965	NonProperStrand	110	3	-inf
chr15	79913288	79913346	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr8	73121960	73122478	protein_coding	Ssbp4	exon	ENSMUSG00000070003	ProperStrand	39	2	-7.3555
chr13	101552324	101555807	protein_coding	Ccnb1	intron	ENSMUSG00000041431	ProperStrand	39	chr16	23110909	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-3.8618
chr5	35191651	35193871	protein_coding	Htt	exon	ENSMUSG00000029104	ProperStrand	73	chr7	52378398	52378453	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	1	-8.1119
chr10	56066024	56066114	LINE	Lx8	L1	chr10Lx856065985	ProperStrand	1	chr10	56065812	56065902	SINE	B2_Mm2	B2	chr10B2_Mm256065749	ProperStrand	1	1	-inf
chrX	70604179	70604233	protein_coding	Zfp275	utr3	ENSMUSG00000031365	ProperStrand	9	chr7	118219574	118219614	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-7.9598
chr2	167836656	167836680	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	chr9	73981603	73981621	protein_coding	Wdr72	intron	ENSMUSG00000044976	NonProperStrand	12	1	-15.4202
chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	chr6	71832629	71832664	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-2.1079
chr9	15119312	15119412	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	chr12	60235142	60235180	snoRNA	ENSMUSG00000077505_SNORA26	.	ENSMUSG00000077505	ProperStrand	82	1	-4.5072
chr15	35359958	35360038	protein_coding	Vps13b	utr5	ENSMUSG00000037646	ProperStrand	56	chr7	116664794	116664884	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.6682
chr3	87710388	87710478	protein_coding	Hdgf	utr5	ENSMUSG00000004897	ProperStrand	117	chr18	35716740	35716820	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.1663
chr11	60370927	60370943	protein_coding	Alkbh5	utr3	ENSMUSG00000042650	ProperStrand	203	chr9	120039602	120039682	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.3174
chr11	68887039	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	chr10	62228336	62228388	snoRNA	ENSMUSG00000080469_Snord98	.	ENSMUSG00000080469	ProperStrand	124	1	-2.8159
chr10	80641694	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	chr16	56035873	56035919	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	4	-11.1847
chr10	94953673	94953699	protein_coding	Mrpl42	intron	ENSMUSG00000062981	ProperStrand	9	chr16	23110909	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.9939
chr4	99577397	99577413	protein_coding	Itgb3bp	intron	ENSMUSG00000028549	ProperStrand	55	chr8	32260335	32260422	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-4.7974
chr7	104810804	104810894	protein_coding	Rsf1	exon	ENSMUSG00000035623	ProperStrand	48	chr4	131865855	131865922	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.1244
chr4	148755295	148755342	protein_coding	Ube4b	exon	ENSMUSG00000028960	ProperStrand	66	chr6	45965480	46120177	protein_coding	Cntnap2	exon	ENSMUSG00000039419	NonProperStrand	283	1	-10.0127
chr6	114260511	114260527	protein_coding	Slc6a1	exon	ENSMUSG00000030310	NonProperStrand	147	chr4	131908809	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-0.7034
chr13	38071223	38071273	protein_coding	Ssr1	utr3	ENSMUSG00000021427	ProperStrand	65	chr18	35716834	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.0388
chr5	115939539	115939558	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr4	122968587	122968677	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	7	-11.8026
chr9	40612894	40612920	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	chr14	31827478	31827551	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-3.3306
chr3	89830532	89830581	protein_coding	Ubap2l	exon	ENSMUSG00000042520	ProperStrand	88	chr4	131865428	131865518	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	5	-14.1796
chr4	43505659	43505759	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	NonProperStrand	174	chr18	35714214	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	NonProperStrand	47	1	-11.6697
chr2	32563527	32563545	protein_coding	Cdk9	exon	ENSMUSG00000009555	NonProperStrand	49	chr4	155270604	155270622	protein_coding	Acap3	intron	ENSMUSG00000029033	ProperStrand	3	1	-inf
chr4	112318108	112322311	protein_coding	Skint2	exon	ENSMUSG00000034359	ProperStrand	2	chr1	162965531	162965577	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-inf
chr15	79913288	79913351	protein_coding	Rpl3	intron	ENSMUSG00000060036	NonProperStrand	7	chr5	116013291	116013355	protein_coding	Rplp0	exon	ENSMUSG00000067274	NonProperStrand	2	2	-inf
chr2	152452743	152452760	protein_coding	Rem1	utr5	ENSMUSG00000000359	ProperStrand	4	chr4	131908810	131908866	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-6.2660
chr6	32121684	32121701	protein_coding	Plxna4	intron	ENSMUSG00000029765	NonProperStrand	15	chr10	23505404	23505457	protein_coding	Rps12	exon	ENSMUSG00000061983	ProperStrand	309	1	-12.8493
chr10	16844328	16844347	LINE	L1_Mur1	L1	chr10L1_Mur116843303	ProperStrand	76	chr3	108357491	108357591	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-4.0908
chr4	131865855	131865978	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr2	26767770	26767796	snoRNA	ENSMUSG00000064829_SNORD36	.	ENSMUSG00000064829	ProperStrand	98	6	-8.3644
chr17	24858122	24858193	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr15	79908957	79909014	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	4	-7.9175
chr13	56353448	56353465	protein_coding	Neurog1	utr5	ENSMUSG00000048904	ProperStrand	105	chr6	72388906	72388922	protein_coding	Mat2a	intron	ENSMUSG00000053907	ProperStrand	51	1	-12.5176
chr4	124132209	124132225	lincRNA	1700057H15Rik	intron	ENSMUSG00000084757	ProperStrand	40	chr7	116663711	116663760	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.2294
chr2	90235295	90235324	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chrX	150715706	150715723	LTR	IAPEY3-int	ERVK	chrXIAPEY3-int150714951	NonProperStrand	5	1	-9.5409
chr6	122267264	122267335	protein_coding	M6pr	utr3	ENSMUSG00000007458	ProperStrand	56	chr1	193925421	193925437	protein_coding	Rcor3	intron	ENSMUSG00000037395	ProperStrand	25	1	-15.2160
chr9	41799740	41812083	protein_coding	Sorl1	exon	ENSMUSG00000049313	ProperStrand	112	chr16	23110891	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-0.7154
chr16	10413790	10417768	protein_coding	Nubp1	exon	ENSMUSG00000022503	ProperStrand	5	chr10	23505152	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-5.7809
chr11	72730046	72730062	protein_coding	Zzef1	exon	ENSMUSG00000055670	ProperStrand	48	chr13	41733233	41733250	protein_coding	Tmem170b	utr3	ENSMUSG00000087370	ProperStrand	15	1	-16.5582
chr6	85239179	85249569	protein_coding	Sfxn5	exon	ENSMUSG00000033720	ProperStrand	26	chr11	77995189	77995237	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-7.8527
chr19	38599575	38599593	protein_coding	Plce1	exon	ENSMUSG00000024998	ProperStrand	20	chr16	23111373	23111436	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.0472
chr10	123822022	123822102	LINE	Lx9	L1	chr10Lx9123822009	NonProperStrand	1	chr10	123822316	123822406	LTR	MER31A	ERV1	chr10MER31A123822267	ProperStrand	1	1	-inf
chr11	68023450	68023521	protein_coding	Ntn1	utr3	ENSMUSG00000020902	ProperStrand	44	chr19	10606434	10607347	protein_coding	Cpsf7	exon	ENSMUSG00000034820	ProperStrand	66	1	-13.7490
chr3	113827103	113827119	protein_coding	Col11a1	utr3	ENSMUSG00000027966	NonProperStrand	139	chr5	77711159	77711218	protein_coding	Rest	exon	ENSMUSG00000029249	ProperStrand	136	1	-9.9845
chr17	39979943	39980007	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr17	35088957	35089006	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	4	-3.6505
chr18	36804349	36804829	protein_coding	Ankhd1	utr3	ENSMUSG00000024483	ProperStrand	56	chr4	131908363	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.5191
chr2	157422272	157422345	lincRNA	2410019O14Rik	intron	ENSMUSG00000087547	ProperStrand	4	chr1	162965548	162965580	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	4	-inf
chr9	56775853	56775870	protein_coding	Snx33	utr5	ENSMUSG00000032733	NonProperStrand	116	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.1328
chr14	15582996	15583014	protein_coding	Slc4a7	exon	ENSMUSG00000021733	ProperStrand	24	chr7	118219574	118219641	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-5.9542
chr1	88252882	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	chr7	52381973	52382012	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-0.8665
chr5	35435774	35435795	protein_coding	Lrpap1	utr3	ENSMUSG00000029103	ProperStrand	43	chr9	120038468	120038558	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.6477
chr13	9833575	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr8	47612608	47613996	protein_coding	Acsl1	exon	ENSMUSG00000018796	ProperStrand	23	4	-19.1718
chr5	90261153	90261173	protein_coding	Adamts3	intron	ENSMUSG00000043635	NonProperStrand	2	chr4	131908753	131908853	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-8.0336
chr7	13614858	13615512	protein_coding	Trim28	exon	ENSMUSG00000005566	ProperStrand	296	chr10	23505150	23505246	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-0.8302
chr7	126864070	126864160	protein_coding	Thumpd1	exon	ENSMUSG00000030942	ProperStrand	14	chr11	69481387	69481467	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-6.0079
chr8	122037877	122039555	protein_coding	Mbtps1	utr3	ENSMUSG00000031835	ProperStrand	81	chr16	23111777	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	6	-10.1016
chr4	47419902	47423542	protein_coding	Tgfbr1	exon	ENSMUSG00000007613	ProperStrand	22	chr16	23111410	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-7.5258
chr17	27061013	27061113	protein_coding	Kifc5b	exon	ENSMUSG00000024301	ProperStrand	6	chr1	162966017	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-8.2222
chr4	141371735	141371767	protein_coding	Casp9	utr3	ENSMUSG00000028914	ProperStrand	2	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-15.1780
chr17	57967505	57967595	protein_coding	Cntnap5c	intron	ENSMUSG00000038048	ProperStrand	8	chr10	90186205	90186295	protein_coding	Anks1b	intron	ENSMUSG00000058589	NonProperStrand	230	1	-14.7373
chr15	78883714	78883768	protein_coding	Ankrd54	utr3	ENSMUSG00000033055	ProperStrand	2	chr5	130557180	130557198	protein_coding	Tpst1	intron	ENSMUSG00000034118	NonProperStrand	1	1	-inf
chr9	69900100	69900118	SINE	B4	B4	chr9B469900093	ProperStrand	1	chr1	162966000	162966031	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-inf
chr1	162965530	162965588	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr7	51505224	51505314	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	6	-2.1706
chr1	179378502	179378519	protein_coding	Zfp238	exon	ENSMUSG00000063659	NonProperStrand	5	chr7	51505507	51505531	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	1	-13.9469
chr16	55969744	55971444	protein_coding	Rpl24	exon	ENSMUSG00000022601	ProperStrand	149	chr17	24857803	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-1.9021
chr18	6112407	6115839	protein_coding	Arhgap12	utr5	ENSMUSG00000041225	ProperStrand	25	chr18	35714198	35714288	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	3	-12.1206
chr10	67504836	67504936	protein_coding	Rtkn2	utr3	ENSMUSG00000037846	ProperStrand	15	chr11	62416959	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	10	-inf
chr5	112865460	112865476	protein_coding	Sez6l	exon	ENSMUSG00000058153	ProperStrand	81	chr8	129468767	129468857	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	3	-9.4184
chr2	69305169	69305221	protein_coding	Lrp2	exon	ENSMUSG00000027070	ProperStrand	35	chr16	23110829	23110919	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.8578
chr13	58228609	58228659	protein_coding	Hnrnpa0	utr3	ENSMUSG00000007836	ProperStrand	110	chr18	10067530	10067546	protein_coding	Rock1	exon	ENSMUSG00000024290	NonProperStrand	22	1	-14.1375
chr19	7096764	7099853	protein_coding	Stip1	exon	ENSMUSG00000024966	ProperStrand	100	chr3	101396411	101396455	protein_coding	Atp1a1	exon	ENSMUSG00000033161	ProperStrand	316	1	-8.9600
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr7	29136525	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	11	-0.9235
chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	chr13	21356482	21356523	tRNA	tRNA72-ThrCGT	.	764581	ProperStrand	3	1	-9.4650
chr10	85512443	85512459	protein_coding	Fbxo7	utr3	ENSMUSG00000001786	ProperStrand	13	chr19	4876484	4876501	protein_coding	Actn3	intron	ENSMUSG00000006457	NonProperStrand	3	1	-inf
chrX	58225380	58225396	pseudogene	Rpl7l1-ps1	.	ENSMUSG00000081323	ProperStrand	46	chr4	131908810	131908872	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.6050
chr5	37331021	37331059	protein_coding	Ppp2r2c	intron	ENSMUSG00000029120	ProperStrand	19	chr5	74489568	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-6.0104
chr1	63382761	63382851	LINE	L1VL2	L1	chr1L1VL263381593	NonProperStrand	1	chr10	121248852	121248932	protein_coding	Srgap1	intron	ENSMUSG00000020121	ProperStrand	33	1	-inf
chr15	99433434	99433451	protein_coding	Aqp6	exon	ENSMUSG00000043144	NonProperStrand	45	chr7	52381972	52381996	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-7.2846
chr2	43554254	43554277	LINE	L1_Mur3	L1	chr2L1_Mur343553952	ProperStrand	1	chr7	52309977	52309993	protein_coding	Prrg2	exon	ENSMUSG00000007837	NonProperStrand	281	1	-inf
chr10	12641510	12642416	lincRNA	B230208H11Rik	exon	ENSMUSG00000085233	ProperStrand	21	chr7	52067652	52067732	protein_coding	Atf5	utr3	ENSMUSG00000038539	ProperStrand	11	1	-18.6542
chr1	37488391	37489445	protein_coding	Unc50	exon	ENSMUSG00000026111	ProperStrand	14	chr18	33954859	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-6.3373
chr4	129305958	129306001	protein_coding	Txlna	utr3	ENSMUSG00000053841	ProperStrand	37	chr11	62418050	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-6.5114
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr8	125626932	125626993	snoRNA	ENSMUSG00000064450_Snord68	.	ENSMUSG00000064450	ProperStrand	181	3	-9.2650
chr18	36961594	36961661	misc_RNA	Vault	.	ENSMUSG00000065145	ProperStrand	177	chr6	38384716	38384733	protein_coding	Ubn2	intron	ENSMUSG00000038538	ProperStrand	86	2	-16.4248
chr10	52145214	52145243	protein_coding	Nus1	intron	ENSMUSG00000023068	ProperStrand	9	chr10	110918549	110918639	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-7.1883
chr11	102294588	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr17	13112498	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	5	-5.8320
chr3	99003137	99003159	protein_coding	Wars2	intron	ENSMUSG00000004233	NonProperStrand	48	chr3	123210854	123210972	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.4382
chr19	30650449	30650468	protein_coding	Prkg1	intron	ENSMUSG00000052920	NonProperStrand	41	chr7	82600670	82600686	protein_coding	Akap13	intron	ENSMUSG00000066406	ProperStrand	80	1	-13.5073
chr9	26906297	26906313	protein_coding	Jam3	exon	ENSMUSG00000031990	ProperStrand	30	chr9	64021199	64022644	protein_coding	Rpl4	utr5	ENSMUSG00000032399	ProperStrand	608	1	-10.0767
chr2	4974190	4974207	protein_coding	Optn	exon	ENSMUSG00000026672	ProperStrand	451	chr14	64081495	64081513	protein_coding	Fam167a	utr3	ENSMUSG00000035095	ProperStrand	80	1	-8.6978
chr2	158203999	158204089	snoRNA	ENSMUSG00000065840_SNORA71	.	ENSMUSG00000065840	ProperStrand	107	chr5	130300459	130300539	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.5786
chr6	119522528	119522565	protein_coding	Erc1	utr3	ENSMUSG00000030172	ProperStrand	69	chr17	13112453	13112543	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	5	-17.2638
chr4	131908688	131908896	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	chr2	166890780	166890828	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	8	-3.0621
chr9	40762540	40762559	protein_coding	4931429I11Rik	intron	ENSMUSG00000032023	NonProperStrand	49	chr8	129468833	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-4.8026
chr12	71347267	71347283	protein_coding	Trim9	utr3	ENSMUSG00000021071	NonProperStrand	75	chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	2	-9.7761
chr11	88157686	88157703	protein_coding	Msi2	utr3	ENSMUSG00000069769	ProperStrand	159	chr9	15119302	15119372	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	3	-8.2053
chr17	24342579	24342596	protein_coding	Ntn3	utr3	ENSMUSG00000079662	ProperStrand	237	chr1	39605605	39605695	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-4.6554
chr4	116991019	117013807	protein_coding	Rnf220	intron	ENSMUSG00000028677	ProperStrand	131	chr4	131865855	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.5033
chr9	15130707	15130793	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	chr8	112363227	112363275	snoRNA	ENSMUSG00000077549_Snord71	.	ENSMUSG00000077549	ProperStrand	196	1	-6.8557
chr15	59031225	59031305	LTR	MLT1C	MaLR	chr15MLT1C59031206	NonProperStrand	1	chr15	59031082	59031172	LTR	MTE2b	MaLR	chr15MTE2b59030840	NonProperStrand	1	1	-inf
chr17	29839472	29839517	protein_coding	Ftsjd2	utr3	ENSMUSG00000024019	ProperStrand	31	chr18	35716839	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-5.7159
chr7	91258882	91258942	protein_coding	Fam108c	utr3	ENSMUSG00000038459	ProperStrand	19	chr2	181405343	181405359	protein_coding	Sox18	exon	ENSMUSG00000046470	ProperStrand	96	1	-14.7067
chr1	95263746	95263763	protein_coding	Ppp1r7	utr3	ENSMUSG00000026275	ProperStrand	44	chr15	79908929	79908955	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-6.0822
chr12	88062992	88063012	protein_coding	Angel1	exon	ENSMUSG00000021257	ProperStrand	12	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-11.0125
chr14	99698365	99698428	protein_coding	Klf5	exon	ENSMUSG00000005148	NonProperStrand	5	chr2	93537065	93537165	protein_coding	Ext2	intron	ENSMUSG00000027198	NonProperStrand	21	1	-18.9639
chrX	71189722	71189758	protein_coding	Hcfc1	utr3	ENSMUSG00000031386	ProperStrand	424	chr1	63225630	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	2	-5.0902
chr10	117208395	117210156	protein_coding	Nup107	exon	ENSMUSG00000052798	ProperStrand	14	chr19	8798741	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-7.7004
chr14	51427119	51427186	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chrX	71517851	71517951	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-1.1187
chr8	13416895	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr1	88661856	88661872	protein_coding	Dis3l2	intron	ENSMUSG00000053333	ProperStrand	20	1	-8.6604
chr8	127317792	127317808	protein_coding	Trim67	utr5	ENSMUSG00000036913	ProperStrand	43	chr3	123210907	123210974	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.6276
chr1	136521727	136521749	protein_coding	Kdm5b	utr5	ENSMUSG00000042207	ProperStrand	223	chr1	162965983	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-1.4045
chr7	89919779	89919847	protein_coding	Eftud1	intron	ENSMUSG00000038563	ProperStrand	12	chr2	166890554	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-10.8289
chr8	79930740	79930758	protein_coding	Arhgap10	intron	ENSMUSG00000037148	NonProperStrand	15	chr4	21606097	21606114	protein_coding	Prdm13	exon	ENSMUSG00000040478	ProperStrand	51	1	-16.5231
chr1	182937852	182937876	protein_coding	Ephx1	intron	ENSMUSG00000038776	NonProperStrand	2	chr15	34370585	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-inf
chr3	98125225	98125242	protein_coding	Phgdh	exon	ENSMUSG00000053398	NonProperStrand	6	chr19	8799582	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-11.5077
chr6	89506986	89507092	protein_coding	Chchd6	intron	ENSMUSG00000030086	ProperStrand	20	chr6	122560004	122560046	protein_coding	Gdf3	utr5	ENSMUSG00000030117	ProperStrand	20	5	-19.3639
chr15	79537601	79538140	protein_coding	Gtpbp1	exon	ENSMUSG00000042535	NonProperStrand	3	chr9	120037994	120038051	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	2	-17.9915
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	85164290	85164306	protein_coding	Sfxn5	utr3	ENSMUSG00000033720	ProperStrand	26	1	-6.0972
chr13	88569462	88569482	LTR	RMER6D	ERVK	chr13RMER6D88569354	ProperStrand	42	chr9	15119631	15119760	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-5.6089
chr15	60661082	60661099	lincRNA	9930014A18Rik	exon	ENSMUSG00000044513	ProperStrand	54	chr16	23111733	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	7	-15.5054
chr11	72893112	72893212	protein_coding	1200014J11Rik	utr3	ENSMUSG00000020783	ProperStrand	11	chr1	75501892	75501908	protein_coding	Obsl1	exon	ENSMUSG00000026211	NonProperStrand	192	1	-14.4509
chr4	6576328	6576358	LINE	L1Md_A	L1	chr4L1Md_A6576336	ProperStrand	1	chr16	20662716	20662748	protein_coding	Psmd2	exon	ENSMUSG00000006998	ProperStrand	99	1	-inf
chr18	53047279	53047296	protein_coding	Sncaip	intron	ENSMUSG00000024534	NonProperStrand	16	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.1079
chrX	11635848	11635865	protein_coding	Bcor	exon	ENSMUSG00000040363	NonProperStrand	293	chr6	115758084	115758120	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-2.5279
chr19	36932346	36932436	protein_coding	Tnks2	exon	ENSMUSG00000024811	ProperStrand	133	chr6	115758017	115758097	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-3.9470
chr11	119707712	119708113	protein_coding	Rptor	exon	ENSMUSG00000025583	ProperStrand	76	chr18	35102297	35102336	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	2	-9.9404
chr11	92960818	92960837	protein_coding	Car10	utr5	ENSMUSG00000056158	ProperStrand	25	chr1	88252880	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-8.3948
chr3	89716723	89716741	protein_coding	Il6ra	intron	ENSMUSG00000027947	NonProperStrand	1	chr2	22445072	22445098	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-inf
chr3	41360114	41360163	protein_coding	Phf17	intron	ENSMUSG00000025764	ProperStrand	101	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-5.8967
chr18	34880002	34880019	protein_coding	Gfra3	utr5	ENSMUSG00000024366	ProperStrand	41	chr10	90432659	90432679	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	1	-11.3868
chr9	104955697	104955713	protein_coding	Mrpl3	utr5	ENSMUSG00000032563	ProperStrand	13	chr17	71990923	71990972	snoRNA	ENSMUSG00000092713_CT010429.1	.	ENSMUSG00000092713	ProperStrand	182	1	-14.2024
chr9	48126295	48126311	protein_coding	Fam55b	utr3	ENSMUSG00000032028	NonProperStrand	2	chr1	162965531	162965547	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-10.5602
chr18	50171382	50171472	protein_coding	Tnfaip8	intron	ENSMUSG00000062210	ProperStrand	8	chr3	123210895	123210975	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.8655
chr3	34615517	34615541	LTR	MTB_Mm	MaLR	chr3MTB_Mm34615397	NonProperStrand	1	chr16	23111372	23111429	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-inf
chr18	89039745	89039766	protein_coding	Socs6	exon	ENSMUSG00000056153	ProperStrand	12	chr11	97643008	97643059	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-5.5085
chr8	119781011	119781094	protein_coding	4933407C03Rik	exon	ENSMUSG00000034390	ProperStrand	48	chr17	35088957	35089006	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-6.3080
chr13	53285957	53285977	protein_coding	Ror2	intron	ENSMUSG00000021464	ProperStrand	46	chr10	61772868	61772885	protein_coding	Hk1	intron	ENSMUSG00000037012	NonProperStrand	16	1	-16.5387
chr8	75007081	75007097	protein_coding	Slc35e1	utr3	ENSMUSG00000019731	ProperStrand	23	chr8	32260335	32260439	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-6.5150
chr2	35036856	35036898	protein_coding	Rab14	utr3	ENSMUSG00000026878	ProperStrand	21	chr9	64022878	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-10.1457
chr9	121659371	121659423	protein_coding	Nktr	exon	ENSMUSG00000032525	ProperStrand	41	chr10	23505211	23505230	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-3.3013
chr15	99461547	99461569	protein_coding	Racgap1	exon	ENSMUSG00000023015	ProperStrand	47	chr9	15118323	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.9207
chr7	123307731	123307748	protein_coding	Plekha7	exon	ENSMUSG00000045659	ProperStrand	66	chr15	79913288	79913332	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-3.4168
chr1	59235969	59235986	protein_coding	Als2	exon	ENSMUSG00000026024	ProperStrand	32	chr5	33591071	33591165	protein_coding	Ctbp1	utr3	ENSMUSG00000037373	ProperStrand	17	6	-19.5393
chr2	90857830	90857897	protein_coding	Celf1	utr3	ENSMUSG00000005506	ProperStrand	61	chr2	26494715	26494815	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.0773
chr12	99673554	99673571	protein_coding	Kcnk10	exon	ENSMUSG00000033854	ProperStrand	6	chr11	106874198	106874236	tRNA	tRNA945-ArgCCG	.	1920916	ProperStrand	133	1	-16.4548
chrX	54644651	54644698	snoRNA	ENSMUSG00000065110_Snord61	.	ENSMUSG00000065110	ProperStrand	40	chr4	131908351	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-5.6514
chr8	90724026	90724084	protein_coding	Papd5	exon	ENSMUSG00000036779	ProperStrand	32	chrX	34622929	34623019	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-4.3443
chr1	75498448	75498473	protein_coding-noncoding	Obsl1	utr3	ENSMUSG00000026211	ProperStrand	1	chr11	87172190	87172206	protein_coding	Ppm1e	exon	ENSMUSG00000046442	ProperStrand	112	1	-inf
chr1	184258286	184258329	protein_coding	Fbxo28	intron	ENSMUSG00000047539	ProperStrand	27	chr1	162968470	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	2	-12.3110
chr7	26449288	26449354	protein_coding	Exosc5	intron	ENSMUSG00000061286	ProperStrand	16	chr4	130305551	130305619	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	2	-19.8568
chrX	12677600	12680463	protein_coding	Usp9x	exon	ENSMUSG00000031010	ProperStrand	174	chr14	31827477	31827497	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	2	-8.0204
chr12	105928602	105928702	protein_coding	Dicer1	utr3	ENSMUSG00000041415	ProperStrand	61	chr11	62418033	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-5.5248
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr7	150717298	150717420	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	20	-18.7655
chr5	67655643	67655733	protein_coding	Tmem33	exon	ENSMUSG00000037720	ProperStrand	6	chr16	23110914	23110994	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.7876
chr17	27699626	27700227	protein_coding	Hmga1	utr3	ENSMUSG00000046711	ProperStrand	180	chr7	118219574	118219649	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-3.9338
chr15	96199915	96200382	protein_coding	Arid2	exon	ENSMUSG00000033237	ProperStrand	34	chr16	23111454	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.1231
chr2	121248184	121248255	protein_coding	Pdia3	exon	ENSMUSG00000027248	ProperStrand	74	chr8	124805938	124805956	protein_coding	Gm20388	intron	ENSMUSG00000092329	ProperStrand	295	1	-9.7002
chr11	78388406	78396845	protein_coding	Nlk	exon	ENSMUSG00000017376	ProperStrand	26	chr17	68170932	68170961	protein_coding	Lama1	exon	ENSMUSG00000032796	ProperStrand	168	1	-12.9402
chr2	90235291	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	17078304	17081117	protein_coding	Prune2	exon	ENSMUSG00000039126	ProperStrand	49	2	-8.0285
chr11	79383787	79383867	protein_coding	Nf1	exon	ENSMUSG00000020716	ProperStrand	42	chrX	39179278	39180389	protein_coding	Thoc2	exon	ENSMUSG00000037475	ProperStrand	30	1	-15.4517
chr9	73981603	73981621	protein_coding	Wdr72	intron	ENSMUSG00000044976	NonProperStrand	12	chr4	122968673	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-9.5364
chr5	111149759	111149825	protein_coding	Ep400	exon	ENSMUSG00000029505	ProperStrand	176	chr19	8799036	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	5	-15.6275
chr4	8463041	8488300	protein_coding	Rab2a	exon	ENSMUSG00000047187	ProperStrand	23	chr9	120039533	120039619	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-5.1432
chr7	66561717	66561797	protein_coding	Ube3a	utr3	ENSMUSG00000025326	ProperStrand	21	chr4	131865378	131865468	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	6	-inf
chr14	26547013	26547103	protein_coding	Zcchc24	intron	ENSMUSG00000055538	ProperStrand	42	chr6	71832622	71832685	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-6.3140
chr9	78326547	78326647	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr9	64022851	64022891	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-1.5417
chr6	117874274	117874374	protein_coding	Hnrnpf	exon	ENSMUSG00000042079	ProperStrand	147	chr16	23111397	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	14	-16.5835
chr2	26767587	26767912	protein_coding	Rpl7a	exon	ENSMUSG00000062647	ProperStrand	234	chr18	73693109	73693137	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	2	-5.1194
chr19	8798757	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	chr2	166888977	166889035	snoRNA	ENSMUSG00000077515_SNORD12	.	ENSMUSG00000077515	ProperStrand	191	1	-2.6657
chr17	8735100	8735117	protein_coding	Pde10a	intron	ENSMUSG00000023868	NonProperStrand	78	chr2	154893122	154894593	protein_coding	Ahcy	exon	ENSMUSG00000027597	ProperStrand	18	1	-15.2207
chr19	6248245	6248262	protein_coding	Atg2a	exon	ENSMUSG00000024773	NonProperStrand	9	chr1	74902715	74902731	protein_coding	Cdk5r2	exon	ENSMUSG00000090071	NonProperStrand	49	1	-17.5984
chr3	94689967	94689983	protein_coding	Psmb4	intron	ENSMUSG00000005779	NonProperStrand	2	chr11	106362638	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-14.8626
chr9	15123930	15123962	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	NonProperStrand	100	chr19	8963027	8963152	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	6	-10.1758
chr5	52551509	52551599	protein_coding	Dhx15	exon	ENSMUSG00000029169	ProperStrand	53	chr16	23111376	23111456	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.4339
chr14	52818778	52821321	protein_coding	Chd8	exon	ENSMUSG00000053754	ProperStrand	167	chr10	23505201	23505268	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-1.7094
chr17	30335652	30335670	protein_coding	Zfand3	intron	ENSMUSG00000044477	NonProperStrand	7	chr18	35714144	35714247	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-7.7147
chr19	43579408	43579425	protein_coding	Got1	intron	ENSMUSG00000025190	NonProperStrand	147	chr16	23111689	23111734	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-0.6947
chr4	117545849	117545939	protein_coding	B4galt2	utr3	ENSMUSG00000028541	ProperStrand	11	chr19	9043697	9043915	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	1	-12.9293
chr1	55137995	55138507	protein_coding	Hspd1	exon	ENSMUSG00000025980	ProperStrand	140	chr2	128920223	128920241	protein_coding	Ttl	utr3	ENSMUSG00000027394	ProperStrand	8	1	-15.7397
chr5	149860359	149861940	protein_coding	Hmgb1	exon	ENSMUSG00000066551	ProperStrand	99	chr1	162965550	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-4.2400
chr2	35023332	35024785	protein_coding	Cep110	exon	ENSMUSG00000057110	ProperStrand	20	chr16	23110909	23110957	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.6223
chr5	37357784	37357806	protein_coding	Wfs1	utr3	ENSMUSG00000039474	ProperStrand	23	chr18	35716823	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-6.5899
chr4	53015201	53015217	SINE	B1F1	Alu	chr4B1F153015138	ProperStrand	102	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-6.0874
chr8	126554122	126554204	protein_coding	Urb2	exon	ENSMUSG00000031976	ProperStrand	64	chr2	166889001	166889030	snoRNA	ENSMUSG00000077515_SNORD12	.	ENSMUSG00000077515	ProperStrand	191	1	-10.8605
mmu-miR-3154	1	21	miRNA	mmu-miR-3154	.	mmu-miR-3154	ProperStrand	1	chr18	35716807	35716836	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-inf
chr4	132748070	132748122	protein_coding	Wasf2	exon	ENSMUSG00000028868	ProperStrand	56	chr10	23505152	23505199	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.3287
chr9	122371614	122371694	LINE	L1M2	L1	chr9L1M2122371571	NonProperStrand	1	chr9	122371428	122371518	SINE	B1_Mur1	Alu	chr9B1_Mur1122371428	NonProperStrand	1	1	-inf
chr10	94862021	94862054	protein_coding	Socs2	intron	ENSMUSG00000020027	ProperStrand	7	chr2	130106056	130106208	protein_coding	Idh3b	exon	ENSMUSG00000027406	ProperStrand	146	1	-15.9727
chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	chr12	106269462	106269552	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	2	-4.3199
chr15	101926811	101926930	protein_coding	Eif4b	utr3	ENSMUSG00000058655	ProperStrand	484	chr1	60292374	60292394	protein_coding	Nbeal1	exon	ENSMUSG00000073664	ProperStrand	20	2	-17.6244
chr2	154203848	154203910	protein_coding	Snta1	exon	ENSMUSG00000027488	ProperStrand	7	chr1	155287307	155287355	snoRNA	ENSMUSG00000064435_SNORA4	.	ENSMUSG00000064435	ProperStrand	263	1	-14.7820
chr14	51427237	51427288	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr4	94406199	94406215	protein_coding	Tek	utr5	ENSMUSG00000006386	NonProperStrand	7	1	-11.6202
chr4	116827119	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	chr8	113362430	113362454	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	1	-3.1664
chr8	112387973	112387989	antisense	Gm17344	.	ENSMUSG00000078143	NonProperStrand	100	chr14	65854357	65854374	protein_coding	Fzd3	exon	ENSMUSG00000007989	ProperStrand	4	1	-17.8226
chr6	97343946	97344036	protein_coding	Frmd4b	intron	ENSMUSG00000030064	ProperStrand	13	chr7	57248702	57248782	protein_coding	Nell1	intron	ENSMUSG00000055409	ProperStrand	8	1	-19.3777
chr7	114886486	114886502	protein_coding	Ppfibp2	exon	ENSMUSG00000036528	NonProperStrand	564	chr3	88715214	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-2.9511
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr5	143733821	143733884	protein_coding	Fscn1	utr3	ENSMUSG00000029581	ProperStrand	200	1	-4.5748
chr5	76659330	76659347	protein_coding	Clock	exon	ENSMUSG00000029238	NonProperStrand	64	chr11	6428089	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-5.3058
chr5	120889875	120889892	protein_coding	Lhx5	intron	ENSMUSG00000029595	NonProperStrand	106	chr4	131908357	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.7009
chr17	45482404	45482420	LINE	L1M2	L1	chr17L1M245482226	ProperStrand	4	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-13.4061
chr8	114318087	114318106	protein_coding	Cfdp1	intron	ENSMUSG00000031954	ProperStrand	32	chr18	12172461	12172477	protein_coding	6030446N20Rik	intron	ENSMUSG00000049411	ProperStrand	235	1	-11.8456
chrX	7246132	7246629	protein_coding	Plp2	exon	ENSMUSG00000031146	ProperStrand	88	chr4	131908810	131908887	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.7510
chr11	29607374	29607423	protein_coding	Rtn4	exon	ENSMUSG00000020458	ProperStrand	117	chr11	62416599	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	3	-9.4966
chr15	76433026	76433233	protein_coding	Cpsf1	exon	ENSMUSG00000034022	ProperStrand	127	chr9	15119665	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.4304
chr6	125271587	125271603	protein_coding	Scnn1a	utr5	ENSMUSG00000030340	ProperStrand	10	chr16	23111741	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-12.6132
chr2	4974190	4974207	protein_coding	Optn	exon	ENSMUSG00000026672	ProperStrand	451	chrX	71485331	71485411	protein_coding	Flna	exon	ENSMUSG00000031328	ProperStrand	134	1	-7.6694
chr4	44062323	44062403	protein_coding	Gne	intron	ENSMUSG00000028479	ProperStrand	8	chr19	8963031	8963121	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-6.1145
chr2	90235296	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	3	-4.3273
chr5	115699512	115700001	protein_coding	Rnf10	exon	ENSMUSG00000041740	ProperStrand	95	chr2	146048167	146048183	protein_coding	Insm1	exon	ENSMUSG00000068154	ProperStrand	8	1	-16.4704
chr10	80641720	80641775	protein_coding	Eef2	intron	ENSMUSG00000034994	ProperStrand	2244	chr1	9932550	9932574	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	2	-2.2487
chr11	78079101	78104048	protein_coding	2610507B11Rik	utr3	ENSMUSG00000010277	ProperStrand	246	chr16	23111373	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	6	-1.9341
chr2	90235310	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr13	51889016	51889033	protein_coding	Sema4d	utr5	ENSMUSG00000021451	NonProperStrand	3	1	-10.7414
chr16	13879520	13879548	protein_coding	Pdxdc1	exon	ENSMUSG00000022680	ProperStrand	26	chr11	62418041	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-7.2178
chr5	73463975	73464076	protein_coding	Fryl	exon	ENSMUSG00000070733	ProperStrand	173	chr8	98269958	98270014	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-3.5264
chr15	38008367	38008383	protein_coding	Ubr5	utr5	ENSMUSG00000037487	ProperStrand	258	chr5	130300468	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-1.1034
chr17	28574981	28575002	protein_coding	Fkbp5	exon	ENSMUSG00000024222	ProperStrand	44	chr8	32260335	32260423	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	2	-8.6056
chr2	90235293	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	122580412	122584741	protein_coding	Ccdc63	utr5	ENSMUSG00000043036	ProperStrand	120	1	-3.1734
chr8	13416897	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr2	26451868	26451884	protein_coding	Gm20532	intron	ENSMUSG00000092356	ProperStrand	46	1	-6.9819
chr7	27947499	27947568	protein_coding	Egln2	intron	ENSMUSG00000058709	ProperStrand	15	chr1	162966193	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-10.3847
chr12	88610838	88610856	protein_coding	Ahsa1	exon	ENSMUSG00000021037	ProperStrand	58	chr12	87843524	87843644	protein_coding	Esrrb	intron	ENSMUSG00000021255	ProperStrand	254	4	-19.8611
chr5	91926497	91926516	pseudogene	Gm15710	.	ENSMUSG00000084111	NonProperStrand	12	chr2	130103432	130103495	snoRNA	ENSMUSG00000065289_SNORD56	.	ENSMUSG00000065289	ProperStrand	829	1	-11.3389
chr11	51557104	51557146	protein_coding	Sec24a	exon	ENSMUSG00000036391	ProperStrand	42	chr14	55475977	55476010	protein_coding	Homez	exon	ENSMUSG00000057156	ProperStrand	4	2	-20.8004
chr11	78214291	78214307	antisense	Gm11194	.	ENSMUSG00000085747	ProperStrand	35	chr4	106472505	106472522	protein_coding	Acot11	intron	ENSMUSG00000034853	ProperStrand	61	1	-14.3655
chr7	112629988	112630005	protein_coding	Prkcdbp	intron	ENSMUSG00000037060	NonProperStrand	43	chr19	8799021	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-6.4907
chr19	10702072	10702144	protein_coding	Ddb1	utr3	ENSMUSG00000024740	ProperStrand	304	chr6	50515522	50515580	protein_coding	Cycs	exon	ENSMUSG00000063694	ProperStrand	11	1	-13.5281
chr13	8766365	8766400	protein_coding	Adarb2	utr3	ENSMUSG00000052551	NonProperStrand	61	chr7	29136525	29136561	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-4.1557
chr15	59432966	59433066	protein_coding	Nsmce2	utr3	ENSMUSG00000059586	ProperStrand	29	chr19	8963027	8963052	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.5658
chr9	78327860	78328052	protein_coding	Eef1a1	exon	ENSMUSG00000037742	NonProperStrand	16	chrX	103415006	103416453	protein_coding	Taf9b	exon	ENSMUSG00000047242	NonProperStrand	4	2	-inf
chr10	110582563	110582580	SINE	ID_B1	B4	chr10ID_B1110582489	ProperStrand	2	chr2	129998658	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	1	-15.5990
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr5	147646588	147646610	protein_coding	Rpl21	exon	ENSMUSG00000041453	ProperStrand	112	1	-7.5446
chr11	55296260	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	chr8	32260335	32260424	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	8	-2.4183
chr5	116865445	116865472	protein_coding	Hspb8	exon	ENSMUSG00000041548	ProperStrand	8	chr2	130101989	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	6	-18.8242
chr5	121828827	121828843	protein_coding	Trafd1	exon	ENSMUSG00000042726	ProperStrand	81	chr16	23110455	23110480	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.9653
chr4	155206545	155206565	protein_coding	Aurkaip1	exon	ENSMUSG00000065990	ProperStrand	7	chr16	23111378	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-5.0992
chr15	88916312	88916375	protein_coding	Trabd	utr3	ENSMUSG00000015363	ProperStrand	12	chr18	32405206	32405222	protein_coding	Ercc3	exon	ENSMUSG00000024382	ProperStrand	280	1	-13.5124
chr19	59335933	59337435	protein_coding	Slc18a2	exon	ENSMUSG00000025094	ProperStrand	11	chr9	75347331	75347389	protein_coding	Tmod3	utr3	ENSMUSG00000058587	ProperStrand	7	1	-inf
chr19	7108787	7109232	protein_coding	Stip1	exon	ENSMUSG00000024966	ProperStrand	100	chr11	69483136	69483191	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.6273
chr10	110217876	110217900	protein_coding	E2f7	exon	ENSMUSG00000020185	ProperStrand	30	chr10	23505152	23505279	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-6.2486
chr1	31974637	31974717	LINE	Lx9	L1	chr1Lx931974454	ProperStrand	1	chr2	28707570	28707660	protein_coding	Ddx31	intron	ENSMUSG00000026806	ProperStrand	8	1	-inf
chr5	88015782	88015798	protein_coding	Sult1e1	exon	ENSMUSG00000029272	ProperStrand	7	chr10	23505150	23505235	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-5.0629
chr2	124924244	124924538	protein_coding	Myef2	exon	ENSMUSG00000027201	ProperStrand	19	chr4	116827119	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-9.3579
chr17	66216941	66216994	protein_coding	Ralbp1	exon	ENSMUSG00000024096	ProperStrand	39	chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	1	-8.9743
chrX	91435148	91435177	protein_coding	Eif2s3x	utr3	ENSMUSG00000035150	NonProperStrand	83	chr11	69483135	69483194	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	5	-9.6446
chr8	24451295	24451375	LINE	Lx9	L1	chr8Lx924451045	NonProperStrand	1	chr17	35521412	35521502	protein_coding	H2-Q4	utr3	ENSMUSG00000035929	NonProperStrand	10	1	-inf
chr6	122678199	122678238	protein_coding	Slc2a3	utr3	ENSMUSG00000003153	ProperStrand	682	chr17	13115720	13115783	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	3	-7.3707
chr8	81256168	81256268	protein_coding	Slc10a7	utr3	ENSMUSG00000031684	ProperStrand	55	chr1	162967515	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-3.6351
chr15	84143735	84143758	protein_coding	Parvb	utr3	ENSMUSG00000022438	ProperStrand	127	chr14	76372288	76372346	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	1	-7.4940
chr17	35378752	35380102	protein_coding	Ddx39b	utr5	ENSMUSG00000019432	ProperStrand	119	chr10	110918548	110918628	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-2.2469
chr3	11580450	11580467	LINE	Lx3A	L1	chr3Lx3A11580299	ProperStrand	53	chr2	158451026	158451043	protein_coding	Actr5	exon	ENSMUSG00000037761	NonProperStrand	94	1	-12.6603
chr14	27199812	27199828	antisense	4933413J09Rik	.	ENSMUSG00000021874	ProperStrand	51	chr11	106362640	106362687	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-7.7290
chr1	133252405	133252451	protein_coding	Srgap2	intron	ENSMUSG00000026425	ProperStrand	299	chr3	82816757	82816774	protein_coding	Fgg	exon	ENSMUSG00000033860	NonProperStrand	321	1	-6.7531
chr15	103175749	103176448	protein_coding	Itga5	exon	ENSMUSG00000000555	ProperStrand	28	chr10	23505152	23505209	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.4185
chr15	96199124	96199169	protein_coding	Arid2	exon	ENSMUSG00000033237	ProperStrand	34	chr3	123210854	123210894	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	5	-13.6018
chr16	89994376	89994393	protein_coding	Tiam1	intron	ENSMUSG00000002489	ProperStrand	80	chr8	18802280	18802297	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-8.7927
chr10	80256699	80256789	protein_coding	Dot1l	utr3	ENSMUSG00000061589	ProperStrand	48	chr5	130300463	130300543	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.8991
chr7	125889940	125890020	protein_coding	9030624J02Rik	exon	ENSMUSG00000030982	ProperStrand	18	chr8	98269959	98270049	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-7.9471
chr19	29192869	29195798	protein_coding	Rcl1	exon	ENSMUSG00000024785	ProperStrand	14	chr11	62418059	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	3	-19.0674
chr16	4879271	4879324	protein_coding-noncoding	Fam100a	utr3	ENSMUSG00000039568	ProperStrand	3	chr4	137125697	137125797	protein_coding	Hspg2	utr3	ENSMUSG00000028763	ProperStrand	812	1	-14.4698
chr5	144638495	144638525	protein_coding	Eif2ak1	exon	ENSMUSG00000029613	ProperStrand	37	chr6	124691242	124691286	protein_coding	Grcc10	utr5	ENSMUSG00000072772	ProperStrand	88	1	-13.5197
chr17	23955819	23955838	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	chr1	89673590	89673711	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-1.7148
chr19	54121757	54121778	protein_coding	Adra2a	exon	ENSMUSG00000033717	NonProperStrand	5	chr17	24665460	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-10.0405
chr7	72462883	72462973	protein_coding	Tjp1	exon	ENSMUSG00000030516	ProperStrand	78	chr4	131826043	131826123	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	1	-8.6919
chr11	50110573	50110627	protein_coding	Canx	exon	ENSMUSG00000020368	ProperStrand	296	chr4	131865381	131865471	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-1.3089
chr3	89930456	89930488	snoRNA	ENSMUSG00000064930_SNORA41	.	ENSMUSG00000064930	ProperStrand	7	chr7	118219574	118219626	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-8.4947
chr1	74746789	74746828	protein_coding	Ttll4	utr3	ENSMUSG00000033257	ProperStrand	24	chr8	73419657	73419682	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	3	-11.6136
chr16	23110562	23110584	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr5	108336363	108336464	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-1.1889
chr9	56775853	56775870	protein_coding	Snx33	utr5	ENSMUSG00000032733	NonProperStrand	116	chr4	122968681	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-4.9930
chr17	24856708	24856760	antisense	Snhg9	.	ENSMUSG00000090101	ProperStrand	218	chr11	84042523	84045163	protein_coding	Acaca	exon	ENSMUSG00000020532	ProperStrand	100	1	-9.7006
chr14	45949538	45949554	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-0.7036
chr15	82980136	82980226	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	chr19	8799589	8799646	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	2	-2.3416
chr5	53257741	53257831	protein_coding	Anapc4	exon	ENSMUSG00000029176	ProperStrand	11	chr15	34370568	34370648	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-6.8789
chr7	105865964	105866041	protein_coding	Prkrir	utr3	ENSMUSG00000030753	ProperStrand	12	chr3	153575089	153575119	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	1	-11.7735
chr19	8799595	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	chr17	24856616	24856716	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	3	-2.6219
chr7	133632930	133633128	protein_coding	Tufm	exon	ENSMUSG00000073838	ProperStrand	28	chr11	62418013	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-7.0687
chr15	97906289	97906355	protein_coding	Senp1	exon	ENSMUSG00000033075	ProperStrand	24	chr5	121655017	121655061	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.5126
chr17	65104167	65104205	protein_coding	Man2a1	utr3	ENSMUSG00000024085	ProperStrand	20	chr16	23110527	23110557	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.4825
chr12	12944235	12944251	protein_coding	Mycn	exon	ENSMUSG00000037169	NonProperStrand	109	chr11	6520321	6520446	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	1	-6.5322
chr12	4685552	4685603	protein_coding	Itsn2	intron	ENSMUSG00000020640	ProperStrand	33	chr7	117189900	117189990	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	17	-22.2441
chr16	21984340	21995408	protein_coding	Liph	exon	ENSMUSG00000044626	ProperStrand	13	chr2	26494763	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-6.0562
chr7	117189961	117190060	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	chr1	145626057	145626173	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	6	-3.7532
chr14	70787670	70787687	protein_coding	Piwil2	intron	ENSMUSG00000033644	ProperStrand	36	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.2292
chr11	48647371	48647410	protein_coding	Trim7	intron	ENSMUSG00000040350	NonProperStrand	20	chr11	87240282	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	6	-19.8195
chr11	77996576	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	chr5	135529897	135529987	snoRNA	ENSMUSG00000088008_SCARNA20	.	ENSMUSG00000088008	ProperStrand	139	5	-17.6018
chr17	27259782	27262844	protein_coding	2900010M23Rik	exon	ENSMUSG00000024208	ProperStrand	13	chr4	122970491	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-10.5184
chr8	129924343	129924370	protein_coding	Pard3	utr3	ENSMUSG00000025812	ProperStrand	44	chr1	162967508	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.0531
chr12	17798107	17798407	protein_coding	Hpcal1	utr3	ENSMUSG00000071379	ProperStrand	51	chr16	23110909	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-5.3684
chr12	17552948	17553029	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr16	23109064	23109093	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	2	-0.8536
chrX	55437636	55437653	pseudogene	Gm14649	.	ENSMUSG00000081837	NonProperStrand	5	chr16	23110828	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr9	14607315	14609821	protein_coding	Mre11a	exon	ENSMUSG00000031928	ProperStrand	20	chr2	130103751	130103824	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-10.6940
chr6	116264067	116264138	protein_coding	Anubl1	exon	ENSMUSG00000042213	ProperStrand	1	chr3	123210889	123210979	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-inf
chr19	8963031	8963178	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	chr13	96100555	96100680	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	15	-5.4455
chr13	23654164	23654221	protein_coding	Hist1h3e	exon	ENSMUSG00000069273	ProperStrand	30	chr9	15119720	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	3	-9.5923
chr8	125414647	125414682	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	chr6	71832576	71832676	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	2	-3.9409
chr7	5031165	5031248	protein_coding	U2af2	utr3	ENSMUSG00000030435	ProperStrand	103	chr16	23111777	23111821	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.1165
chr8	86615285	86615323	protein_coding	Rfx1	exon	ENSMUSG00000031706	ProperStrand	20	chr3	144141680	144141697	protein_coding	Hs2st1	intron	ENSMUSG00000040151	NonProperStrand	31	1	-16.7624
chr19	38869531	38869547	protein_coding	Noc3l	exon	ENSMUSG00000024999	NonProperStrand	149	chr19	40439532	40439565	protein_coding	Sorbs1	exon	ENSMUSG00000025006	ProperStrand	25	1	-13.2604
chr12	33638594	33638614	lincRNA	4933406C10Rik	exon	ENSMUSG00000086543	ProperStrand	52	chr19	8798493	8798550	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-5.4907
chr7	31895791	31899711	protein_coding	Hpn	utr5	ENSMUSG00000001249	ProperStrand	126	chr7	34949441	34949461	protein_coding	Uba2	exon	ENSMUSG00000052997	ProperStrand	165	1	-9.7945
chr7	148633600	148633875	protein_coding	Rplp2	utr5	ENSMUSG00000025508	ProperStrand	106	chr1	162967541	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	3	-6.5087
chr13	64863287	64863304	protein_coding	Cntnap3	exon	ENSMUSG00000033063	ProperStrand	87	chr15	79913288	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.9190
chr3	88132323	88132413	protein_coding	0610031J06Rik	utr3	ENSMUSG00000001418	ProperStrand	9	chr16	23111697	23111777	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.4225
chr16	23111776	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	chr2	37255621	37255660	snoRNA	ENSMUSG00000077756_Snord90	.	ENSMUSG00000077756	ProperStrand	167	2	-1.2175
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr18	46765280	46765361	protein_coding	Eif1a	intron	ENSMUSG00000057561	ProperStrand	44	1	-5.5589
chr2	84679411	84679429	protein_coding	Slc43a1	utr5	ENSMUSG00000027075	NonProperStrand	10	chr3	129422041	129422057	protein_coding	Egf	exon	ENSMUSG00000028017	NonProperStrand	4	1	-19.9092
chr11	70979151	70979167	protein_coding	Nlrp1b	exon	ENSMUSG00000070390	NonProperStrand	2	chr19	8798740	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-12.1939
chr2	73175103	73175189	protein_coding	Scrn3	utr3	ENSMUSG00000008226	ProperStrand	9	chr16	23110829	23110874	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-11.2656
chr10	57941783	57941863	protein_coding	Ranbp2	exon	ENSMUSG00000003226	ProperStrand	52	chr11	77996560	77996623	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-6.3747
chr19	45825707	45825727	protein_coding	Mgea5	utr3	ENSMUSG00000025220	ProperStrand	53	chr9	15119287	15119397	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-5.3502
chr15	81480237	81480327	protein_coding	Ep300	exon	ENSMUSG00000055024	ProperStrand	118	chr7	116664826	116664906	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	12	-inf
chr19	8963086	8963186	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	chr1	162965993	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	NonProperStrand	8	3	-19.4471
chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr11	65601581	65601598	protein_coding	Map2k4	intron	ENSMUSG00000033352	ProperStrand	10	1	-10.0944
chr17	35643065	35643132	protein_coding	Pou5f1	exon	ENSMUSG00000024406	ProperStrand	104	chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	1	-7.4069
chr15	98350146	98350283	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	chr15	98356818	98356908	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	3	-1.6825
chr9	39358287	39358304	protein_coding	Olfr958	exon	ENSMUSG00000050853	NonProperStrand	266	chr11	106362640	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-4.4938
chr1	95262266	95262348	protein_coding	Ppp1r7	utr3	ENSMUSG00000026275	ProperStrand	44	chr16	23110941	23110957	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.3090
chr17	13162351	13162368	protein_coding	Wtap	exon	ENSMUSG00000060475	NonProperStrand	8	chr16	23111766	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-9.4467
chr5	148113281	148113297	protein_coding	Cdx2	utr3	ENSMUSG00000029646	ProperStrand	276	chr15	34370637	34370664	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-1.0756
chr11	33057007	33061126	protein_coding	Npm1	exon	ENSMUSG00000057113	ProperStrand	352	chr11	98878363	98878455	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	2	-5.0660
chr13	49757849	49757881	protein_coding	Nol8	exon	ENSMUSG00000021392	ProperStrand	39	chr11	69483135	69483209	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	4	-11.0146
chr1	162967738	162967806	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	chr1	89681248	89681348	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-2.5966
chr18	38611284	38612027	protein_coding	Ndfip1	exon	ENSMUSG00000024425	ProperStrand	42	chr1	162965535	162965596	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-6.6405
chr18	40463853	40463870	protein_coding	Kctd16	intron	ENSMUSG00000051401	ProperStrand	13	chr2	130101986	130102019	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-8.4260
chr19	41987581	41987671	protein_coding	Pgam1	intron	ENSMUSG00000011752	ProperStrand	124	chr5	108336409	108336489	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-3.5110
chr11	96166229	96166245	antisense	0610040B09Rik	.	ENSMUSG00000085645	ProperStrand	3	chr9	44187795	44187825	protein_coding	Hyou1	utr5	ENSMUSG00000032115	ProperStrand	145	1	-18.2409
chr13	104991435	104991525	protein_coding	Trim23	utr3	ENSMUSG00000021712	ProperStrand	4	chr4	131908357	131908437	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-6.5415
chr16	3909080	3911467	protein_coding	Cluap1	utr5	ENSMUSG00000014232	ProperStrand	6	chr1	162965979	162966015	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	4	-19.9512
chr3	94778661	94778677	protein_coding	Pi4kb	utr5	ENSMUSG00000038861	NonProperStrand	18	chr7	118219575	118219638	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-6.5317
chr6	87769189	87769558	protein_coding	Isy1	exon	ENSMUSG00000030056	ProperStrand	172	chr11	97643041	97643074	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-0.9081
chr1	155096227	155096279	protein_coding	Lamc1	exon	ENSMUSG00000026478	ProperStrand	239	chr7	109789611	109789627	protein_coding	Olfr554	exon	ENSMUSG00000073971	NonProperStrand	66	1	-10.3505
chr7	29171540	29171558	protein_coding	Med29	utr3	ENSMUSG00000003444	NonProperStrand	134	chr8	32260335	32260423	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	2	-5.3821
chrX	35773153	35773172	protein_coding	Lamp2	utr3	ENSMUSG00000016534	ProperStrand	19	chr11	69483136	69483184	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-7.6497
chr19	36936607	36936662	protein_coding	Tnks2	exon	ENSMUSG00000024811	ProperStrand	133	chr7	52382755	52382826	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	4	-15.9720
chr7	26472435	26472451	protein_coding	Tgfb1	utr5	ENSMUSG00000002603	NonProperStrand	154	chr7	148633552	148633808	protein_coding	Rplp2	utr5	ENSMUSG00000025508	ProperStrand	106	1	-10.2786
chr11	101833237	101833253	protein_coding	Dusp3	utr3	ENSMUSG00000003518	NonProperStrand	8	chr15	76685784	76685802	protein_coding	Zfp251	intron	ENSMUSG00000022526	NonProperStrand	5	1	-18.8889
chr1	88252765	88253761	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chr5	130300442	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	18	-5.6923
chr17	10395078	10395116	SINE	RSINE1	B4	chr17RSINE110394991	ProperStrand	1	chr8	73419657	73419712	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-inf
chr6	117874888	117874930	protein_coding	Hnrnpf	exon	ENSMUSG00000042079	ProperStrand	147	chr7	116663733	116663764	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-2.2042
chr15	81110991	81111009	SINE	ID4	ID	chr15ID481110956	ProperStrand	272	chr1	89681202	89681287	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-2.6280
chr18	44112990	44113009	SINE	B3	B2	chr18B344112921	NonProperStrand	1	chr17	35089184	35089232	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-inf
chr19	7348532	7348637	protein_coding	Rcor2	exon	ENSMUSG00000024968	ProperStrand	120	chr2	93873802	93874087	protein_coding	Hsd17b12	exon	ENSMUSG00000027195	ProperStrand	28	1	-13.4646
chr11	78313939	78313956	protein_coding	Vtn	exon	ENSMUSG00000017344	ProperStrand	188	chr17	35089182	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-3.3220
chr11	103059065	103059081	protein_coding	Fmnl1	exon	ENSMUSG00000055805	ProperStrand	26	chr7	4691730	4691749	protein_coding	Suv420h2	utr5	ENSMUSG00000059851	NonProperStrand	70	1	-14.6970
chr5	74489207	74489287	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr9	109985358	109985448	protein_coding	Mtap4	utr3	ENSMUSG00000032479	ProperStrand	188	1	-3.4498
chr1	72301656	72301768	snRNA	ENSMUSG00000093333_AC120136.3	.	ENSMUSG00000093333	ProperStrand	68	chr2	26768408	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-5.3571
chr5	122580412	122584741	protein_coding	Ccdc63	utr5	ENSMUSG00000043036	ProperStrand	120	chr19	8963153	8963178	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.2177
chr1	158573620	158573696	protein_coding	Abl2	utr3	ENSMUSG00000026596	ProperStrand	37	chr15	34370577	34370667	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-4.4605
chr19	25032477	25035960	protein_coding	Cbwd1	exon	ENSMUSG00000024878	ProperStrand	14	chr3	123210891	123210971	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	9	-22.6212
chr19	14671976	14672049	protein_coding	Tle4	utr5	ENSMUSG00000024642	ProperStrand	23	chr1	162965562	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.0979
chr5	117713138	117713155	protein_coding	Taok3	intron	ENSMUSG00000061288	NonProperStrand	13	chr16	23110455	23110526	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.3353
chr12	30604781	30604797	protein_coding	Myt1l	exon	ENSMUSG00000061911	ProperStrand	38	chr16	23111702	23111750	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.6668
chr18	13019264	13019321	protein_coding	Osbpl1a	intron	ENSMUSG00000044252	ProperStrand	39	chr7	29136532	29136622	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-5.3874
chr11	78092590	78092658	protein_coding	2610507B11Rik	exon	ENSMUSG00000010277	ProperStrand	246	chr17	6232006	6232022	protein_coding	Tulp4	exon	ENSMUSG00000034377	NonProperStrand	265	1	-7.5177
chr18	36019198	36019288	protein_coding	Cxxc5	intron	ENSMUSG00000046668	ProperStrand	30	chr16	23111384	23111464	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.3326
chr4	48097855	48097871	protein_coding	Nr4a3	utr3	ENSMUSG00000028341	ProperStrand	1	chr10	23506325	23506348	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-inf
chr11	62416574	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	chr3	153574607	153574654	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	9	-18.9868
chr10	122702078	122702094	protein_coding	Fam19a2	utr5	ENSMUSG00000044071	NonProperStrand	52	chr8	73419657	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.3903
chr17	78679376	78679426	protein_coding	Crim1	exon	ENSMUSG00000024074	ProperStrand	19	chr1	162967504	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-5.6883
chr1	54361817	54371000	protein_coding	Ccdc150	exon	ENSMUSG00000025983	ProperStrand	56	chr10	23505152	23505252	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.3287
chr7	31408522	31409596	protein_coding	Cox6b1	exon	ENSMUSG00000036751	ProperStrand	23	chr17	24856656	24856736	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-8.3485
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr7	117166754	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	2	-2.1191
chr7	133726521	133726538	protein_coding	Cln3	exon	ENSMUSG00000030720	ProperStrand	87	chr1	63225280	63225322	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	1	-8.0928
chr18	82751541	82751631	protein_coding	Mbp	intron	ENSMUSG00000041607	ProperStrand	11	chr18	33954817	33954897	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-6.8319
chr16	54679541	54679559	LTR	MYSERV16_I-int	ERVK	chr16MYSERV16_I-int54679027	NonProperStrand	31	chr4	131865866	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.8751
chr11	50628361	50628377	protein_coding	Zfp354c	exon	ENSMUSG00000044807	ProperStrand	21	chr7	108440949	108440967	protein_coding	Atg16l2	intron	ENSMUSG00000047767	ProperStrand	121	1	-14.0279
chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	chr1	162966189	162966207	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-1.6957
chr11	95141707	95141742	protein_coding	Myst2	exon	ENSMUSG00000038909	ProperStrand	56	chr7	116664817	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.6682
chr3	82707847	82707863	antisense	4930564K09Rik	.	ENSMUSG00000086273	ProperStrand	48	chr4	129662257	129662276	protein_coding	Bai2	utr5	ENSMUSG00000028782	ProperStrand	119	1	-12.3881
chr4	118809139	118809164	protein_coding	Slc2a1	utr3	ENSMUSG00000028645	ProperStrand	361	chr14	52628316	52628427	protein_coding	Zfp219	exon	ENSMUSG00000049295	ProperStrand	27	5	-19.5965
chr17	69611662	69611680	protein_coding	Epb4.1l3	exon	ENSMUSG00000024044	ProperStrand	28	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	2	-14.6908
chr12	31989499	31989599	protein_coding	Lamb1	exon	ENSMUSG00000002900	ProperStrand	87	chr11	62416608	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-4.4511
chr1	63225679	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	chr11	51551280	51551382	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	2	-2.8815
chr15	9038120	9038136	protein_coding	1110020G09Rik	utr3	ENSMUSG00000022253	NonProperStrand	20	chr15	34370613	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-5.6655
chr2	156754500	156754600	protein_coding	Ndrg3	exon	ENSMUSG00000027634	ProperStrand	16	chr5	101303990	101304011	protein_coding	Agpat9	intron	ENSMUSG00000029314	ProperStrand	2	1	-inf
chr1	5229163	5229243	LTR	ETnERV2-int	ERVK	chr1ETnERV2-int5228035	NonProperStrand	1	chr1	120491638	120491728	protein_coding	Clasp1	intron	ENSMUSG00000064302	ProperStrand	23	1	-inf
chr10	79316213	79316230	lincRNA	E130317F20Rik	exon	ENSMUSG00000091994	NonProperStrand	97	chr9	113827187	113827265	protein_coding	Clasp2	utr3	ENSMUSG00000033392	ProperStrand	30	1	-13.7530
chr2	158318142	158318704	protein_coding	Ralgapb	exon	ENSMUSG00000027652	ProperStrand	22	chr4	131865938	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-8.8412
chr2	29556215	29556254	protein_coding	Rapgef1	exon	ENSMUSG00000039844	ProperStrand	58	chr7	29136525	29136610	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.4223
chr7	29137609	29137657	protein_coding	Rps16	exon	ENSMUSG00000037563	ProperStrand	191	chr17	35088957	35089021	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	3	-8.9881
chr17	34342291	34342381	protein_coding-noncoding	Gm20496	utr3	ENSMUSG00000092550	ProperStrand	1	chr17	34342426	34342506	protein_coding	Tap2	exon	ENSMUSG00000024339	NonProperStrand	1	1	-inf
chr16	4764832	4764883	protein_coding	Hmox2	exon	ENSMUSG00000004070	ProperStrand	13	chr9	103950068	103950086	protein_coding	Uba5	intron	ENSMUSG00000032557	ProperStrand	111	1	-15.1947
chr12	68768933	68769023	LINE	L1Md_F2	L1	chr12L1Md_F268768613	ProperStrand	13	chr5	45401445	45401525	LINE	L1Md_F2	L1	chr5L1Md_F245401408	ProperStrand	3	1	-inf
chr17	46285129	46285145	protein_coding	Mad2l1bp	exon	ENSMUSG00000034509	NonProperStrand	67	chr7	30627646	30627672	protein_coding	Zfp940	intron	ENSMUSG00000050855	NonProperStrand	2	1	-inf
chr12	98109137	98109227	LTR	RMER6A	ERVK	chr12RMER6A98109155	NonProperStrand	1	chr12	98109311	98109391	LTR	RMER6A	ERVK	chr12RMER6A98109218	NonProperStrand	1	1	-inf
chr8	80041484	80041501	protein_coding	Arhgap10	intron	ENSMUSG00000037148	ProperStrand	58	chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-7.9288
chr11	95911259	95911359	protein_coding	Ube2z	utr3	ENSMUSG00000014349	ProperStrand	41	chr2	26768368	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	8	-inf
chr4	88928067	88928084	protein_coding	Cdkn2a	utr5	ENSMUSG00000044303	ProperStrand	13	chr11	69483206	69483232	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-5.3217
mmu-miR-6240	1	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr13	91064217	91064265	protein_coding	Rps23	exon	ENSMUSG00000049517	ProperStrand	34	2	-11.3327
chr6	35173653	35174530	protein_coding	Nup205	exon	ENSMUSG00000038759	ProperStrand	56	chr7	116664807	116664887	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.6682
chr4	122998998	122999046	protein_coding	Bmp8a	intron	ENSMUSG00000032726	ProperStrand	2	chr9	15119733	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-inf
chr13	9833561	9833671	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr5	65952377	65952395	protein_coding	Ube2k	intron	ENSMUSG00000029203	ProperStrand	289	1	-2.1045
chr16	5020414	5021434	protein_coding	Glyr1	exon	ENSMUSG00000022536	ProperStrand	60	chr16	23111388	23111447	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.2589
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr16	17210492	17210512	protein_coding	Rimbp3	exon	ENSMUSG00000071636	ProperStrand	67	1	-8.3721
chr11	70821031	70821049	protein_coding	Derl2	utr3	ENSMUSG00000018442	NonProperStrand	5	chr11	97642952	97643078	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-12.1765
chr7	31429919	31433590	protein_coding	Rbm42	exon	ENSMUSG00000036733	ProperStrand	9	chr10	23505151	23505278	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-7.7215
chr17	46944434	46944524	protein_coding	BC032203	intron	ENSMUSG00000036568	ProperStrand	64	chr12	60141416	60141496	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	6	-22.4684
chr2	93579753	93579815	protein_coding	Ext2	exon	ENSMUSG00000027198	ProperStrand	49	chr17	35299545	35299635	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-5.1695
chr18	76297633	76297649	protein_coding	Zbtb7c	exon	ENSMUSG00000044646	ProperStrand	64	chr5	121655016	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-6.1551
chr17	33985634	33985680	protein_coding	Cd320	utr3	ENSMUSG00000002308	ProperStrand	8	chr9	15118325	15118375	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-7.4559
chr7	152118581	152118597	protein_coding	Ccnd1	exon	ENSMUSG00000070348	ProperStrand	93	chr14	33005038	33005092	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-3.1853
chr13	81962989	81963006	SINE	B1F2	Alu	chr13B1F281962960	ProperStrand	15	chr18	35714168	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-6.1300
chr7	117038284	117039785	protein_coding	Dennd5a	exon	ENSMUSG00000035901	ProperStrand	22	chr11	69481335	69481378	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	3	-12.1314
chr2	29591552	29591585	protein_coding	Rapgef1	exon	ENSMUSG00000039844	ProperStrand	58	chr10	90581034	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-4.8726
chr6	39349242	39349332	protein_coding	Mkrn1	exon	ENSMUSG00000029922	ProperStrand	177	chrX	34622938	34623018	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-1.3951
chr8	109213100	109213116	protein_coding	Tmco7	exon	ENSMUSG00000041949	NonProperStrand	15	chr11	69481393	69481435	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.8683
chr19	59534008	59534026	protein_coding	Emx2	exon	ENSMUSG00000043969	NonProperStrand	87	chr5	108334195	108334242	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-4.1112
chr9	50583487	50583506	protein_coding	Alg9	utr5	ENSMUSG00000032059	ProperStrand	16	chr7	116664148	116665140	protein_coding	Rpl27a	exon	ENSMUSG00000046364	ProperStrand	149	1	-14.1795
chr7	24779190	24779213	SINE	ID_B1	B4	chr7ID_B124779183	NonProperStrand	54	chr15	9038120	9038136	protein_coding	1110020G09Rik	utr3	ENSMUSG00000022253	NonProperStrand	20	1	-15.7285
chr12	29318655	29319108	protein_coding	Rps7	exon	ENSMUSG00000061477	ProperStrand	129	chr16	23111705	23111805	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-1.7026
chr10	76086124	76086142	protein_coding	Col6a2	utr5	ENSMUSG00000020241	ProperStrand	13	chr5	23825941	23825957	protein_coding	Kcnh2	exon	ENSMUSG00000038319	ProperStrand	242	1	-13.6336
chr8	73872630	73872708	protein_coding	Myo9b	exon	ENSMUSG00000004677	ProperStrand	78	chr5	130295425	130295488	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-4.7410
chr11	50014351	50014428	protein_coding	Sqstm1	exon	ENSMUSG00000015837	ProperStrand	36	chr1	162965537	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.2292
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	2	-6.0140
chr8	126431663	126433798	protein_coding	Nup133	exon	ENSMUSG00000039509	ProperStrand	59	chr2	130103808	130103824	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-8.5052
chr3	55987230	55987247	protein_coding	Nbea	utr5	ENSMUSG00000027799	NonProperStrand	115	chr1	74732010	74732499	protein_coding	Ttll4	exon	ENSMUSG00000033257	ProperStrand	24	1	-13.8644
chr2	32563799	32565043	protein_coding	Cdk9	exon	ENSMUSG00000009555	ProperStrand	12	chr1	45448521	45448537	protein_coding	Col5a2	exon	ENSMUSG00000026042	ProperStrand	184	1	-14.3503
chr7	91740519	91740536	protein_coding	Fah	intron	ENSMUSG00000030630	NonProperStrand	4	chr11	87275972	87285002	snoRNA	ENSMUSG00000070168_U3	.	ENSMUSG00000070168	ProperStrand	3	1	-inf
chr10	26766750	26766771	protein_coding	Lama2	intron	ENSMUSG00000019899	NonProperStrand	36	chr9	108643038	108646584	protein_coding	Prkar2a	exon	ENSMUSG00000032601	ProperStrand	43	1	-15.0230
chr18	3266397	3266439	protein_coding	Crem	utr3	ENSMUSG00000063889	ProperStrand	2	chr13	81382626	81382647	protein_coding	Gpr98	intron	ENSMUSG00000069170	ProperStrand	16	1	-inf
chr9	53513995	53514089	protein_coding	Rab39	exon	ENSMUSG00000055069	NonProperStrand	1	chr11	77996560	77996613	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	NonProperStrand	3	1	-inf
chr12	100626727	100626743	protein_coding	Foxn3	exon	ENSMUSG00000033713	ProperStrand	74	chr16	23111690	23111753	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.5802
chr9	50816824	50816841	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	chrX	34622906	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	4	-7.3010
chr11	3426352	3426368	protein_coding	Smtn	exon	ENSMUSG00000020439	ProperStrand	222	chr19	60832437	60832454	protein_coding	Nanos1	exon	ENSMUSG00000072437	NonProperStrand	3	1	-17.0769
chr5	4757683	4757699	protein_coding	Fzd1	utr5	ENSMUSG00000044674	NonProperStrand	4	chr11	94431660	94431931	protein_coding	Acsf2	exon	ENSMUSG00000076435	ProperStrand	34	1	-18.8058
chrX	54751845	54751861	protein_coding	Gpr101	utr3	ENSMUSG00000036357	ProperStrand	24	chr17	44174508	44174575	protein_coding	Rcan2	utr3	ENSMUSG00000039601	ProperStrand	10	1	-19.2433
chr9	20713669	20714166	protein_coding	Dnmt1	exon	ENSMUSG00000004099	ProperStrand	91	chr2	91436232	91436312	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-6.6702
chr6	115757991	115758096	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	chr9	15118258	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	14	-0.7974
chr6	87842013	87842634	protein_coding	Copg	exon	ENSMUSG00000030058	ProperStrand	68	chr14	52826527	52826545	protein_coding	Chd8	exon	ENSMUSG00000053754	ProperStrand	167	2	-17.1638
chr15	36530650	36530750	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr8	13416897	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-1.5259
chr2	118963884	118963961	protein_coding	Rad51	intron	ENSMUSG00000027323	ProperStrand	10	chr9	120038630	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-6.5201
chr3	113733872	113733888	protein_coding	Col11a1	utr5	ENSMUSG00000027966	NonProperStrand	139	chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	1	-8.9352
chr1	89681182	89681272	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	chr14	52829466	52829546	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-1.0362
chr11	86533053	86533768	protein_coding	Cltc	exon	ENSMUSG00000047126	ProperStrand	319	chr2	26768373	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	5	-11.5048
chr1	93851932	93852691	protein_coding	Hdac4	exon	ENSMUSG00000026313	ProperStrand	27	chr3	94302283	94302318	protein_coding	Snx27	utr3	ENSMUSG00000028136	ProperStrand	24	2	-20.2496
chr19	53713221	53713842	protein_coding	Smc3	exon	ENSMUSG00000024974	ProperStrand	61	chr3	123210854	123210888	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-5.6138
chr9	59526811	59526871	protein_coding	Pkm2	utr3	ENSMUSG00000032294	ProperStrand	1296	chr1	95334861	95334898	protein_coding	Hdlbp	exon	ENSMUSG00000034088	ProperStrand	97	2	-10.0941
chrX	100767009	100767025	non_coding	B230206F22Rik	.	ENSMUSG00000086370	NonProperStrand	20	chr7	135026306	135026365	protein_coding	Zfp646	exon	ENSMUSG00000049739	ProperStrand	29	1	-16.9994
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr12	59369666	59369682	protein_coding	Clec14a	exon	ENSMUSG00000045930	ProperStrand	6	1	-14.1269
chr11	3426352	3426368	protein_coding	Smtn	exon	ENSMUSG00000020439	ProperStrand	222	chr17	45704976	45705063	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	1	-4.1903
chr11	35622688	35622704	protein_coding	Rars	exon	ENSMUSG00000018848	ProperStrand	18	chr2	162065760	162065776	protein_coding	Ptprt	intron	ENSMUSG00000053141	ProperStrand	28	1	-17.1466
chr16	8648773	8648789	protein_coding	Pmm2	exon	ENSMUSG00000022711	NonProperStrand	1	chr17	24856626	24856753	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-inf
chr11	98859174	98860497	protein_coding	Top2a	exon	ENSMUSG00000020914	ProperStrand	324	chr1	162966006	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-0.9133
chr2	60156435	60156525	protein_coding	Ly75	exon	ENSMUSG00000026980	ProperStrand	59	chr2	26493365	26493445	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-3.7738
chr7	5017783	5017883	protein_coding	U2af2	intron	ENSMUSG00000030435	ProperStrand	103	chr15	79913288	79913346	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.6237
chr10	127800479	127800495	protein_coding	Coq10a	utr3	ENSMUSG00000039914	NonProperStrand	15	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.2332
chr7	24779190	24779213	SINE	ID_B1	B4	chr7ID_B124779183	NonProperStrand	54	chr2	118611946	118611962	protein_coding	Disp2	exon	ENSMUSG00000040035	NonProperStrand	204	1	-11.0710
chr3	27035947	27035966	protein_coding	Ect2	exon	ENSMUSG00000027699	ProperStrand	17	chr19	8963027	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.5881
chr3	51192472	51192862	protein_coding	4930583H14Rik	utr3	ENSMUSG00000037161	ProperStrand	14	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-8.2934
chr4	98024663	98024679	protein_coding	Tm2d1	exon	ENSMUSG00000028563	NonProperStrand	2	chr4	41150111	41150159	snoRNA	ENSMUSG00000089265_SNORD121A	.	ENSMUSG00000089265	ProperStrand	370	1	-17.1274
chr4	153394457	153394547	protein_coding	Lrrc47	utr3	ENSMUSG00000029028	ProperStrand	30	chr17	24857721	24857801	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.5270
chr8	125011808	125012035	protein_coding	Fam38a	exon	ENSMUSG00000014444	ProperStrand	132	chr6	72389158	72389174	protein_coding	Mat2a	intron	ENSMUSG00000053907	ProperStrand	51	1	-12.0581
chr1	164627736	164627836	protein_coding	Prrc2c	exon	ENSMUSG00000040225	ProperStrand	413	chr6	95544717	95545650	protein_coding	Suclg2	exon	ENSMUSG00000061838	ProperStrand	35	1	-10.5366
chr16	91814233	91814251	protein_coding	Atp5o	intron	ENSMUSG00000022956	ProperStrand	37	chr15	34370545	34370607	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	3	-10.7379
chr11	100414998	100415014	protein_coding	Ttc25	exon	ENSMUSG00000006784	NonProperStrand	119	chr18	44555634	44555651	protein_coding	Dcp2	exon	ENSMUSG00000024472	ProperStrand	44	1	-12.5647
chr8	13416896	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr2	181316563	181316579	protein_coding	Uckl1	exon	ENSMUSG00000089917	ProperStrand	142	1	-4.7736
chr13	23643422	23643487	protein_coding	Hist1h4f	exon	ENSMUSG00000069274	ProperStrand	28	chr4	131908810	131908890	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	7	-17.4942
chr19	12173559	12173577	protein_coding	Olfr1427	exon	ENSMUSG00000067525	NonProperStrand	5	chr4	131908357	131908444	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-6.0411
chr13	100184611	100184700	protein_coding	Mrps27	intron	ENSMUSG00000041632	ProperStrand	21	chr18	35716845	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.0576
chr18	35714162	35714262	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	chr1	173041632	173041649	tRNA	tRNA710-ValCAC	.	1095960	ProperStrand	206	3	-4.1232
chr1	88247109	88247128	protein_coding	Ncl	utr3	ENSMUSG00000026234	ProperStrand	1184	chr5	108334275	108334332	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	2	-0.7103
chr2	90235313	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	120098077	120098093	protein_coding	Bahcc1	utr5	ENSMUSG00000039741	ProperStrand	118	1	-3.2036
chr1	84747032	84748171	protein_coding	Trip12	exon	ENSMUSG00000026219	ProperStrand	248	chr9	120039605	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.0507
chr18	85104472	85104496	LTR	MT2B2	ERVL	chr18MT2B285104075	ProperStrand	2	chr10	23506233	23506323	protein_coding	Rps12	intron	ENSMUSG00000061983	ProperStrand	309	2	-inf
chr4	132091129	132091212	SINE	B1_Mur4	Alu	chr4B1_Mur4132091044	NonProperStrand	7	chr15	36538619	36538709	protein_coding	Pabpc1	utr5	ENSMUSG00000022283	ProperStrand	908	7	-inf
chr11	48619088	48619107	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	chr4	116827121	116827187	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-3.6511
chr2	26493365	26493455	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	chr19	44188470	44188550	snoRNA	ENSMUSG00000077391_SNORA12	.	ENSMUSG00000077391	ProperStrand	506	2	-1.1316
chr1	88425754	88425786	protein_coding	Ptma	exon	ENSMUSG00000026238	ProperStrand	385	chr19	8799587	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-3.2094
chr8	125010500	125010699	protein_coding	Fam38a	exon	ENSMUSG00000014444	ProperStrand	132	chr1	162967499	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-3.7695
chr2	26493479	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr17	24343586	24343602	protein_coding	Ntn3	exon	ENSMUSG00000079662	ProperStrand	237	1	-3.5622
chr11	61543521	61543561	protein_coding	Prpsap2	utr3	ENSMUSG00000020528	ProperStrand	18	chr16	23111374	23111464	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-8.3413
chr2	125156572	125156590	protein_coding	Fbn1	intron	ENSMUSG00000027204	NonProperStrand	32	chr6	70794803	70794820	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	1	-12.6915
chr1	136307620	136307702	protein_coding	Cyb5r1	utr3	ENSMUSG00000026456	ProperStrand	12	chr16	23110902	23110928	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.4686
chr4	118808927	118809017	protein_coding	Slc2a1	exon	ENSMUSG00000028645	ProperStrand	361	chr4	131865385	131865465	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-1.0453
chrX	19683228	19683244	protein_coding	Slc9a7	exon	ENSMUSG00000037341	NonProperStrand	136	chr17	35089214	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-3.9181
chr16	84774685	84809628	protein_coding	Jam2	exon	ENSMUSG00000053062	ProperStrand	39	chr4	131865855	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-4.3823
chr6	67222154	67222192	protein_coding	Serbp1	exon	ENSMUSG00000036371	ProperStrand	261	chr7	13594771	13594787	protein_coding	Zbtb45	intron	ENSMUSG00000049600	ProperStrand	16	1	-13.0526
chr2	84875561	84875577	protein_coding	P2rx3	utr5	ENSMUSG00000027071	NonProperStrand	302	chr11	62418037	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-2.5512
chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	chr17	34020356	34020467	protein_coding	Kifc1	exon	ENSMUSG00000079553	ProperStrand	47	1	-9.2536
chr7	52749495	52749991	protein_coding	Nucb1	exon	ENSMUSG00000030824	ProperStrand	49	chr10	110918602	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-3.8243
chr5	108999310	109000412	protein_coding	Gak	exon	ENSMUSG00000062234	ProperStrand	33	chr7	116664848	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	4	-12.1395
chr1	39677545	39677562	protein_coding	Creg2	utr3	ENSMUSG00000050967	NonProperStrand	8	chr2	158185600	158185652	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-10.5996
chr3	138116818	138117644	protein_coding	Adh5	exon	ENSMUSG00000028138	ProperStrand	16	chr5	136614841	136615335	protein_coding	Alkbh4	utr5	ENSMUSG00000039754	ProperStrand	40	1	-16.8746
chr2	31924012	31924028	protein_coding	Fam78a	utr3	ENSMUSG00000050592	NonProperStrand	340	chr11	106362638	106362670	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-4.0309
chr19	11271200	11271217	protein_coding	Ms4a13	utr5	ENSMUSG00000057240	ProperStrand	59	chr8	73419662	73419725	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.1606
chr12	119301895	119301912	protein_coding	Dnahc11	intron	ENSMUSG00000018581	ProperStrand	65	chr5	54389949	54389965	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	1	-10.6206
chr2	145789285	145789302	protein_coding	4930529M08Rik	utr3	ENSMUSG00000037143	NonProperStrand	10	chr16	43886794	43886875	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	3	-20.1405
chr1	88247740	88247876	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	chr11	77996557	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	10	-5.2736
chrX	40944841	40944857	protein_coding	Gm362	exon	ENSMUSG00000078320	ProperStrand	129	chr10	23506294	23506347	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-5.4416
chr18	35403609	35403699	protein_coding	Ctnna1	exon	ENSMUSG00000037815	ProperStrand	115	chr2	26493399	26493493	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-4.5165
chr13	37896288	38025981	protein_coding	Rreb1	utr3	ENSMUSG00000039087	ProperStrand	33	chr11	6428060	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-7.2160
chr11	108016804	108016826	protein_coding	Prkca	intron	ENSMUSG00000050965	ProperStrand	48	chr4	131908356	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.7522
chr11	58768564	58768664	protein_coding	Hist3h2a	utr3	ENSMUSG00000078851	ProperStrand	67	chr11	6520317	6520395	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	1	-7.4973
chr3	94994869	94994921	protein_coding-noncoding	Gabpb2	utr3	ENSMUSG00000038766	NonProperStrand	2	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-14.4340
chr3	121971824	121971914	protein_coding	Gclm	utr3	ENSMUSG00000028124	ProperStrand	31	chr8	129468792	129468872	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-5.6976
chr7	88489259	88489751	protein_coding	Rps17	exon	ENSMUSG00000061787	ProperStrand	105	chr16	23111372	23111446	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-1.2710
chr7	146684406	146684425	protein_coding	Inpp5a	intron	ENSMUSG00000025477	ProperStrand	166	chrX	103398740	103398807	protein_coding	Pgk1	utr3	ENSMUSG00000062070	ProperStrand	484	1	-7.1050
chrX	34631946	34644599	protein_coding	Upf3b	utr3	ENSMUSG00000036572	ProperStrand	10	chr9	15119722	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	4	-18.8591
chr4	43505656	43505746	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr17	27559700	27572220	protein_coding	Grm4	utr3	ENSMUSG00000063239	ProperStrand	147	2	-2.9422
chr4	116991019	116991036	protein_coding	Rnf220	intron	ENSMUSG00000028677	ProperStrand	131	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-5.6937
chr2	113931605	113931705	protein_coding	Aqr	exon	ENSMUSG00000040383	ProperStrand	70	chr9	15118334	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.1858
chr13	38869022	38869053	Simple_repeat	(TTG)n	Simple_repeat	chr13(TTG)n38869020	NonProperStrand	2	chr9	15119631	15119730	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-9.8289
chr9	119928203	119928220	protein_coding	Xirp1	exon	ENSMUSG00000079243	NonProperStrand	4	chr3	123210906	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-7.3786
chr10	127527164	127527186	protein_coding	Atp5b	utr3	ENSMUSG00000025393	ProperStrand	612	chr7	117166806	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	2	-1.8430
chr9	120039251	120039276	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	chr7	80547651	80547667	protein_coding	Rgma	intron	ENSMUSG00000070509	ProperStrand	46	1	-10.0583
chrX	131512273	131512319	protein_coding-noncoding	Zmat1	utr3	ENSMUSG00000052676	ProperStrand	1	chr16	23111394	23111447	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-inf
chr1	180558406	180558423	protein_coding	Kif26b	intron	ENSMUSG00000026494	NonProperStrand	14	chr19	8963086	8963167	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.9719
chr15	21880214	21880235	LTR	RLTR33	ERVK	chr15RLTR3321880129	ProperStrand	1	chr8	113366304	113366354	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	1	-inf
chr11	97528138	97528438	protein_coding	Mllt6	exon	ENSMUSG00000038437	NonProperStrand	12	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	NonProperStrand	14	1	-inf
chr9	15119288	15119368	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	chr9	64023241	64023331	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	1	-0.9744
chrX	17621754	17621834	LTR	ORR1A1	MaLR	chrXORR1A117621502	ProperStrand	1	chrX	17621872	17621962	LTR	ORR1D2	MaLR	chrXORR1D217621848	NonProperStrand	1	1	-inf
chr19	3704776	3704824	SINE	B2_Mm2	B2	chr19B2_Mm23704721	ProperStrand	1	chr18	35102298	35102351	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-inf
chr11	101428540	101428559	protein_coding	Nbr1	exon	ENSMUSG00000017119	ProperStrand	91	chr4	83938091	83938107	protein_coding	Bnc2	exon	ENSMUSG00000028487	ProperStrand	76	1	-12.0012
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr14	29319237	29319253	protein_coding	Wnt5a	utr5	ENSMUSG00000021994	NonProperStrand	26	1	-10.4037
chr17	68193636	68193697	protein_coding	Arhgap28	utr3	ENSMUSG00000024043	ProperStrand	13	chr15	34370543	34370601	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-6.5354
chr19	38470512	38470530	protein_coding	Tmem20	utr5	ENSMUSG00000044026	NonProperStrand	23	chr2	63936035	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-9.7947
chr12	17285644	17285744	protein_coding	Pdia6	exon	ENSMUSG00000020571	ProperStrand	114	chr15	79913288	79913309	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.4501
chr18	64328476	64328492	antisense	1700091E21Rik	.	ENSMUSG00000086128	NonProperStrand	35	chrX	71517821	71517890	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-7.6204
chr17	15775068	15775148	LTR	MMETn-int	ERVK	chr17MMETn-int15773732	ProperStrand	1	chr17	15775509	15775599	LTR	MMETn-int	ERVK	chr17MMETn-int15775184	ProperStrand	1	1	-inf
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr18	21811771	21811790	protein_coding	Klhl14	intron	ENSMUSG00000042514	ProperStrand	4	1	-14.5254
chr2	90235322	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr18	76254177	76254194	protein_coding	Zbtb7c	intron	ENSMUSG00000044646	ProperStrand	64	1	-4.3396
chrX	138159145	138159161	protein_coding	Irs4	exon	ENSMUSG00000054667	NonProperStrand	98	chr6	71832550	71832603	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-4.6603
chr1	164611364	164670539	protein_coding	Prrc2c	exon	ENSMUSG00000040225	ProperStrand	413	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	2	-8.4849
chr9	20370078	20370168	LTR	RMER17A2	ERVK	chr9RMER17A220370085	NonProperStrand	1	chr9	20354644	20354724	lincRNA	Gm17523	intron	ENSMUSG00000092119	ProperStrand	13	1	-inf
chr5	3693225	3693241	protein_coding	Ankib1	exon	ENSMUSG00000040351	NonProperStrand	98	chr14	31953025	31953118	protein_coding	Stab1	exon	ENSMUSG00000042286	NonProperStrand	127	1	-10.8220
chr13	80899314	80899337	LINE	Lx2	L1	chr13Lx280898484	ProperStrand	1	chr9	15130904	15131005	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	1	-inf
chr12	52849617	52849634	protein_coding	Hectd1	exon	ENSMUSG00000035247	NonProperStrand	43	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.8927
chr8	113568847	113569503	protein_coding	Aars	exon	ENSMUSG00000031960	NonProperStrand	8	chr12	117810281	117810299	protein_coding	Ptprn2	intron	ENSMUSG00000056553	ProperStrand	13	2	-19.4921
chr8	74008400	74008417	protein_coding	Ano8	exon	ENSMUSG00000034863	NonProperStrand	171	chr17	24858593	24858729	protein_coding	Rps2	intron	ENSMUSG00000044533	ProperStrand	373	1	-7.5615
chr2	25078290	25078399	protein_coding	Tubb4b	exon	ENSMUSG00000036752	ProperStrand	58	chr3	123210853	123210894	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-3.8170
chr4	131908362	131908466	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr2	121949511	121949527	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	1	-4.3267
chr14	93639834	93639853	protein_coding	Pcdh9	intron	ENSMUSG00000055421	NonProperStrand	9	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.9939
chr18	77368835	77371832	protein_coding	Pias2	exon	ENSMUSG00000025423	ProperStrand	52	chr18	35716835	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-4.2728
chr13	38039307	38039406	protein_coding	Rreb1	exon	ENSMUSG00000039087	ProperStrand	33	chr2	26494708	26494728	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.2179
chr10	66688900	66688973	protein_coding	Jmjd1c	exon	ENSMUSG00000037876	ProperStrand	110	chr14	56159296	56159314	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	2	-15.3769
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	100683585	100683602	protein_coding	Stat5b	utr5	ENSMUSG00000020919	NonProperStrand	5	1	-9.5409
chr1	37898095	37898111	protein_coding	Tsga10	exon	ENSMUSG00000060771	ProperStrand	79	chr5	121655016	121655125	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.2421
chr7	50690726	50690742	protein_coding	Lim2	exon	ENSMUSG00000004613	NonProperStrand	50	chr9	24955755	24955797	protein_coding	Herpud2	utr5	ENSMUSG00000008429	ProperStrand	8	1	-17.5475
chr16	10853047	10853127	protein_coding	A630055G03Rik	intron	ENSMUSG00000037991	NonProperStrand	2	chr9	116598997	116599087	protein_coding	Rbms3	intron	ENSMUSG00000039607	NonProperStrand	54	1	-inf
chr3	88117535	88122338	protein_coding	Cct3	exon	ENSMUSG00000001416	ProperStrand	82	chr12	55795364	55795380	protein_coding	Eapp	intron	ENSMUSG00000054302	NonProperStrand	62	1	-12.6213
chr8	3516535	3516552	protein_coding	Pnpla6	utr5	ENSMUSG00000004565	ProperStrand	60	chr4	43512195	43512360	protein_coding	E130306D19Rik	exon	ENSMUSG00000051517	ProperStrand	6	1	-17.9623
chr10	125388146	125388162	SINE	ID_B1	B4	chr10ID_B1125388121	NonProperStrand	1	chr15	34370573	34370632	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-inf
chr1	37434662	37434680	protein_coding	Inpp4a	intron	ENSMUSG00000026113	NonProperStrand	2	chr4	131865855	131865977	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-8.7800
chr11	61324962	61325042	protein_coding	B9d1	intron	ENSMUSG00000001039	NonProperStrand	3	chr12	106269345	106269435	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	NonProperStrand	38	3	-inf
chr16	23111375	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	chr12	110874221	110874290	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	5	-0.7279
chr2	104966492	104966508	antisense	AI314831	.	ENSMUSG00000074987	ProperStrand	4	chr4	122968678	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-11.9281
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr15	98350146	98350283	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	6	-3.5628
chr5	37064275	37064363	protein_coding	D5Ertd579e	utr5	ENSMUSG00000029190	ProperStrand	43	chr8	73419657	73419727	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.7421
chr7	73007228	73007318	protein_coding	Pcsk6	exon	ENSMUSG00000030513	ProperStrand	32	chr16	23110829	23110909	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.9664
chr17	37211318	37211410	protein_coding	Gabbr1	utr3	ENSMUSG00000024462	ProperStrand	27	chr1	162965981	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-5.1289
chr2	73666547	73666614	protein_coding	Atf2	exon	ENSMUSG00000027104	ProperStrand	37	chr4	19941459	19941482	protein_coding	Ttpa	intron	ENSMUSG00000073988	ProperStrand	2	2	-inf
chr5	33135944	33136034	protein_coding	C330019G07Rik	utr3	ENSMUSG00000054280	ProperStrand	22	chr7	116663634	116663714	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-7.3098
chr17	79195835	79200999	protein_coding	Heatr5b	utr3	ENSMUSG00000039414	ProperStrand	27	chr12	88778631	88778721	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-8.0951
chr11	48616641	48616706	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	chr14	52829460	52829490	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	2	-7.2006
chr19	3910951	3910968	protein_coding	Ndufs8	exon	ENSMUSG00000059734	ProperStrand	2	chr7	116663634	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-9.6916
chr8	96697295	96697424	protein_coding	Mt2	utr3	ENSMUSG00000031762	ProperStrand	71	chr1	162965565	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.9733
chr2	90235302	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	46884450	46884466	protein_coding	Cnpy3	exon	ENSMUSG00000023973	ProperStrand	85	1	-3.8052
chr19	38869531	38869547	protein_coding	Noc3l	exon	ENSMUSG00000024999	NonProperStrand	149	chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	1	-10.7410
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr3	52388277	52388294	SINE	B4A	B4	chr3B4A52388218	ProperStrand	169	1	-2.5711
chr5	31369945	31369968	protein_coding	Cad	exon	ENSMUSG00000013629	ProperStrand	260	chrX	149827752	149827825	protein_coding	Klf8	utr3	ENSMUSG00000041649	ProperStrand	7	1	-14.8076
chr9	65315937	65315981	protein_coding	Spg21	intron	ENSMUSG00000032388	ProperStrand	5	chr1	162967489	162967546	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-8.4848
chr7	35022353	35022453	protein_coding	4931406P16Rik	utr3	ENSMUSG00000066571	ProperStrand	75	chr4	131908689	131908722	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-0.9361
chr10	76225039	76225055	protein_coding	Pcbp3	utr3	ENSMUSG00000001120	NonProperStrand	10	chr11	35637904	35638010	protein_coding	Rars	exon	ENSMUSG00000018848	ProperStrand	18	2	-20.4212
chr11	56852583	56852601	protein_coding	Gria1	intron	ENSMUSG00000020524	ProperStrand	10	chr6	85816314	85816331	protein_coding	Cml2	utr3	ENSMUSG00000033634	ProperStrand	2	1	-inf
chr4	43505655	43505931	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	2	-0.8974
chr9	56773800	56773900	protein_coding	Snx33	exon	ENSMUSG00000032733	ProperStrand	4	chr1	162965555	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-8.7752
chr12	102178335	102178382	protein_coding	Ccdc88c	exon	ENSMUSG00000021182	ProperStrand	151	chr18	12172461	12172477	protein_coding	6030446N20Rik	intron	ENSMUSG00000049411	ProperStrand	235	1	-8.7271
chr5	74489272	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr19	46440887	46440957	protein_coding	Tmem180	exon	ENSMUSG00000025227	ProperStrand	20	2	-12.5459
chr10	122593901	122593918	protein_coding	Usp15	intron	ENSMUSG00000020124	NonProperStrand	18	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-11.8112
chr2	130996264	130996287	protein_coding	Spef1	utr3	ENSMUSG00000027329	ProperStrand	2	chr15	79908956	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-12.8905
chr2	90235295	90235345	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	20548793	20548811	protein_coding	Nkain3	intron	ENSMUSG00000055761	ProperStrand	34	1	-5.5655
chr19	25485347	25485401	protein_coding	Kank1	exon	ENSMUSG00000032702	ProperStrand	218	chr5	74489643	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	2	-2.9261
chr11	61357692	61357709	protein_coding	Epn2	exon	ENSMUSG00000001036	ProperStrand	16	chr17	57144861	57144936	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	ProperStrand	29	1	-17.6077
chr19	36955016	36955066	protein_coding	Tnks2	exon	ENSMUSG00000024811	ProperStrand	133	chr9	15118258	15118349	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	3	-5.6713
chr1	136525285	136527065	protein_coding	Kdm5b	exon	ENSMUSG00000042207	ProperStrand	223	chr5	147646760	147646798	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	1	-5.3689
chr4	95688869	95688918	protein_coding	Hook1	exon	ENSMUSG00000028572	ProperStrand	49	chr9	120038552	120038607	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.4063
chr11	55296231	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	chr1	162966824	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	3	-1.6219
chr9	78279873	78279889	protein_coding	E330016A19Rik	utr3	ENSMUSG00000032344	NonProperStrand	1	chr11	6428095	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-inf
chr6	88843446	88847287	protein_coding	Mcm2	exon	ENSMUSG00000002870	ProperStrand	83	chr8	108373566	108373583	protein_coding	Cenpt	exon	ENSMUSG00000036672	ProperStrand	13	1	-15.7537
chr6	143153180	143153206	protein_coding	Etnk1	utr3	ENSMUSG00000030275	ProperStrand	61	chrX	138662762	138662779	protein_coding	Nxt2	utr5	ENSMUSG00000042271	ProperStrand	20	1	-15.4915
chr17	33767588	33768135	protein_coding	Zfp414	exon	ENSMUSG00000073423	ProperStrand	12	chr13	22114284	22114320	tRNA	tRNA972-SerCGA	.	567292	ProperStrand	7	2	-inf
chr10	98485769	98485788	protein_coding	Atp2b1	utr3	ENSMUSG00000019943	ProperStrand	31	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-10.3107
chr6	26993408	26993428	LINE	Lx8	L1	chr6Lx826993334	ProperStrand	1	chr3	123210849	123210939	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	NonProperStrand	45	1	-inf
chr2	164351221	164351237	LTR	RLTR44-int	ERVK	chr2RLTR44-int164349701	ProperStrand	1	chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-inf
chr19	8798484	8798553	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	chr5	125884616	125884638	tRNA	tRNA1317-AlaTGC	.	1008352	ProperStrand	149	1	-3.4885
chr9	46006695	46006771	protein_coding	Sik3	exon	ENSMUSG00000034135	ProperStrand	49	chr9	15118323	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.8425
chr4	131908351	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	chr7	16524110	16524219	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	5	-0.6961
chr11	90247901	90247922	protein_coding	Hlf	intron	ENSMUSG00000003949	NonProperStrand	25	chr1	39605591	39605666	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	2	-14.4758
chr15	99466631	99468090	protein_coding	Racgap1	exon	ENSMUSG00000023015	ProperStrand	47	chr9	115162794	115162896	protein_coding	Stt3b	intron	ENSMUSG00000032437	ProperStrand	66	1	-13.6153
chr8	107776872	107776888	protein_coding	B3gnt9-ps	utr3	ENSMUSG00000069920	ProperStrand	1	chr4	131865867	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr2	90235296	90235327	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	67125763	67125825	snoRNA	ENSMUSG00000089375_Snord107	.	ENSMUSG00000089375	ProperStrand	451	1	-1.0732
chr9	21490460	21490476	protein_coding	Smarca4	exon	ENSMUSG00000032187	ProperStrand	196	chr4	131865381	131865403	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-1.9229
chr7	13615209	13615227	protein_coding	Trim28	exon	ENSMUSG00000005566	ProperStrand	296	chr11	97642952	97643069	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-0.8531
chr8	91106344	91106360	protein_coding	Nkd1	intron	ENSMUSG00000031661	ProperStrand	57	chr5	121655017	121655099	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.8433
chr11	105140500	105142404	protein_coding	Tlk2	exon	ENSMUSG00000020694	ProperStrand	19	chr8	113447149	113447171	protein_coding	St3gal2	intron	ENSMUSG00000031749	ProperStrand	206	1	-13.1741
chr11	120646497	120647073	protein_coding	Gps1	exon	ENSMUSG00000025156	ProperStrand	22	chr10	23505160	23505240	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-4.9863
chr19	46080183	46080199	protein_coding	Hps6	exon	ENSMUSG00000074811	NonProperStrand	45	chr17	24856709	24856753	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-6.9985
chr11	68887039	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	chr1	87983916	87983982	snoRNA	ENSMUSG00000077274_SNORA26	.	ENSMUSG00000077274	ProperStrand	361	4	-5.0543
chr4	86500725	86500753	protein_coding	Rps6	exon	ENSMUSG00000028495	ProperStrand	263	chr10	84109587	84109636	protein_coding	Polr3b	exon	ENSMUSG00000034453	ProperStrand	41	1	-11.1185
chr18	10052132	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr8	72334599	72334615	protein_coding	Gmip	exon	ENSMUSG00000036246	ProperStrand	102	1	-7.7409
chr19	5667556	5671559	protein_coding	Pcnxl3	exon	ENSMUSG00000054874	NonProperStrand	5	chr18	35714217	35714290	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	NonProperStrand	47	3	-inf
chr7	130363535	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	chr12	99730899	99730917	protein_coding	Kcnk10	intron	ENSMUSG00000033854	NonProperStrand	37	1	-13.5406
chr18	75979993	76297649	protein_coding	Zbtb7c	utr5	ENSMUSG00000044646	ProperStrand	64	chr4	131908809	131908874	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-2.2184
chr14	105527823	105527851	protein_coding	Rbm26	exon	ENSMUSG00000022119	ProperStrand	60	chr7	28443911	28443927	protein_coding	Map3k10	exon	ENSMUSG00000040390	NonProperStrand	21	1	-15.4309
chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	chr1	163060539	163060561	protein_coding	Klhl20	utr5	ENSMUSG00000026705	ProperStrand	11	1	-12.6721
chr5	115707131	115710152	protein_coding	Rnf10	exon	ENSMUSG00000041740	ProperStrand	95	chr9	15119670	15119760	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-3.4044
chr4	131865816	131865865	lincRNA	Snhg12	exon	ENSMUSG00000086290	ProperStrand	178	chr10	110918549	110918639	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-1.6104
chr1	165993210	165993226	protein_coding	Sell	exon	ENSMUSG00000026581	ProperStrand	12	chr3	68809165	68809188	protein_coding	Smc4	intron	ENSMUSG00000034349	ProperStrand	21	1	-18.6634
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	1	-3.6772
chr1	75433547	75433592	protein_coding	Gmppa	exon	ENSMUSG00000033021	ProperStrand	7	chr7	116663634	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	7	-inf
chr7	52637069	52637161	protein_coding	Snrnp70	intron	ENSMUSG00000063511	ProperStrand	61	chr4	122968651	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-6.2482
chr3	88715215	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr6	94776852	94776875	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	1	-3.1944
chr2	130106720	130106769	protein_coding	Idh3b	exon	ENSMUSG00000027406	ProperStrand	146	chr15	76541224	76541240	protein_coding	Lrrc14	utr5	ENSMUSG00000033728	ProperStrand	52	1	-11.8170
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr11	53276831	53276847	antisense	Gm12212	.	ENSMUSG00000085707	ProperStrand	5	1	-13.8775
chr15	96404390	96404408	protein_coding	Slc38a1	utr3	ENSMUSG00000023169	ProperStrand	69	chr5	23940632	23940696	protein_coding	Slc4a2	intron	ENSMUSG00000028962	ProperStrand	3	1	-20.1445
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	1	-5.3309
chr2	24825186	24827046	protein_coding	Wdr85	exon	ENSMUSG00000026975	ProperStrand	323	chr5	121655016	121655039	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-1.0129
chr11	97642952	97643090	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	chr13	90238585	90238699	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	7	-2.0418
chr9	79915104	79915120	protein_coding	Senp6	utr5	ENSMUSG00000034252	ProperStrand	110	chr19	8799021	8799071	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-4.6562
chr8	73902322	73904898	protein_coding	Nr2f6	exon	ENSMUSG00000002393	ProperStrand	4	chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	1	-15.4303
chrX	51078208	51078307	protein_coding	Zfp36l3	exon	ENSMUSG00000059334	ProperStrand	13	chr11	6520321	6520364	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	5	-inf
chr10	12902322	12902670	protein_coding	Ltv1	exon	ENSMUSG00000019814	ProperStrand	76	chr8	32260397	32260424	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-4.1795
chr18	35107665	35108694	protein_coding	Hspa9	exon	ENSMUSG00000024359	ProperStrand	166	chr15	79908956	79908983	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-3.5371
chr11	75337307	75337497	protein_coding	Scarf1	exon	ENSMUSG00000038188	ProperStrand	1	chr16	23111784	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-inf
mmu-miR-6240	2	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr10	80008750	80009061	protein_coding	Rexo1	exon	ENSMUSG00000047417	NonProperStrand	3	1	-12.2357
chr5	108336363	108336454	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	chr4	116828379	116828451	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	2	-1.6241
chr16	11959977	11959995	SINE	B4A	B4	chr16B4A11959913	ProperStrand	1	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-inf
chr9	20762991	20763008	SINE	ID_B1	B4	chr9ID_B120762917	NonProperStrand	8	chr15	81781777	81781856	protein_coding	Pmm1	utr3	ENSMUSG00000022474	ProperStrand	24	1	-18.7360
chr7	118221574	118221664	protein_coding	Eif4g2	exon	ENSMUSG00000005610	ProperStrand	134	chr7	117189959	117190039	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-1.9501
chr16	23111772	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	NonProperStrand	47	chr19	8798740	8798805	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	NonProperStrand	2	1	-inf
chr1	60040424	60040440	protein_coding	Fam117b	utr3	ENSMUSG00000041040	ProperStrand	31	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.4420
mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr11	50544662	50544679	protein_coding	Adamts2	intron	ENSMUSG00000036545	ProperStrand	13	1	-8.9859
chr1	137281443	137281566	protein_coding	Ipo9	utr3	ENSMUSG00000041879	ProperStrand	53	chrX	131227315	131227335	protein_coding	Armcx4	exon	ENSMUSG00000049804	ProperStrand	15	1	-16.4095
chr2	29874032	29875478	protein_coding	Spna2	exon	ENSMUSG00000057738	ProperStrand	222	chr2	26494720	26494800	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	4	-4.7480
chr8	59991935	59992107	protein_coding	Hmgb2	exon	ENSMUSG00000054717	ProperStrand	184	chr15	34370601	34370681	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-1.6430
chr11	43518723	43518814	protein_coding	Pwwp2a	exon	ENSMUSG00000044950	ProperStrand	22	chr1	162965536	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.1855
chr19	5897435	5897451	protein_coding	Dpf2	utr3	ENSMUSG00000024826	NonProperStrand	7	chr5	125531369	125531385	protein_coding	Ncor2	exon	ENSMUSG00000029478	ProperStrand	377	1	-14.0573
chr1	88247741	88247868	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	chr15	79908929	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	7	-1.3789
chr6	79869174	79869197	LTR	MT2A	ERVL	chr6MT2A79869041	ProperStrand	3	chr16	23110913	23110965	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-inf
chr17	32359087	32361082	protein_coding	Brd4	exon	ENSMUSG00000024002	ProperStrand	121	chr3	123210854	123210894	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-3.3029
chr17	10511598	10511698	protein_coding	Qk	exon	ENSMUSG00000062078	ProperStrand	63	chr1	88252836	88252876	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-6.5435
chr11	102116727	102116763	protein_coding	BC030867	exon	ENSMUSG00000034773	ProperStrand	10	chr1	162965531	162965582	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	5	-20.2572
chr7	52713380	52713470	protein_coding	Ftl1	utr3	ENSMUSG00000050708	ProperStrand	807	chr7	52382752	52382832	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-1.9368
chr8	72613823	72613839	protein_coding	Hapln4	utr3	ENSMUSG00000007594	NonProperStrand	85	chr16	20126918	20126936	protein_coding	Klhl24	utr3	ENSMUSG00000062901	ProperStrand	212	1	-10.0820
chrX	71482772	71482862	protein_coding	Flna	exon	ENSMUSG00000031328	ProperStrand	134	chr1	89673524	89673604	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-1.8898
chr16	37384897	37384913	protein_coding	Stxbp5l	utr5	ENSMUSG00000022829	ProperStrand	332	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-1.4268
chr5	124540121	124540138	protein_coding	Abcb9	exon	ENSMUSG00000029408	ProperStrand	4	chr7	29136525	29136580	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-7.7378
chr1	102076755	102076789	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	chr11	106362671	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	3	-8.9880
chr8	85839281	85839314	protein_coding	Elmod2	utr3	ENSMUSG00000035151	ProperStrand	2	chr4	126588156	126588238	protein_coding	Zmym4	exon	ENSMUSG00000042446	ProperStrand	94	1	-19.1279
chr9	20248725	20248741	protein_coding	Zfp26	exon	ENSMUSG00000063108	ProperStrand	9	chr8	32260358	32260432	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-8.4420
chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-0.9037
chr4	25170641	25170659	processed_transcript	Gm11906	.	ENSMUSG00000085885	NonProperStrand	5	chr11	95913108	95917200	protein_coding	Ube2z	exon	ENSMUSG00000014349	ProperStrand	41	1	-19.0663
chr7	38354919	38354935	protein_coding	Zfp536	exon	ENSMUSG00000043456	NonProperStrand	236	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-6.2072
chr6	43604552	43604597	protein_coding	Tpk1	intron	ENSMUSG00000029735	ProperStrand	13	chr7	118219574	118219620	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-7.1950
chr9	71326666	71326715	protein_coding	Polr2m	utr3	ENSMUSG00000032199	ProperStrand	83	chr11	97642952	97642973	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.9358
chr17	45708034	45708124	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr6	70805469	70805549	snoRNA	ENSMUSG00000065750_SNORA5	.	ENSMUSG00000065750	ProperStrand	165	1	-4.7540
chr9	72569456	72574229	protein_coding	Nedd4	exon	ENSMUSG00000032216	ProperStrand	308	chr9	15119643	15119723	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-0.9320
chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	chr16	23110861	23111010	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	13	-6.5787
chr2	130104012	130104634	protein_coding	Nop56	exon	ENSMUSG00000027405	ProperStrand	125	chr5	93635259	93635276	protein_coding	Ccni	utr5	ENSMUSG00000063015	NonProperStrand	4	1	-17.4241
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr2	26768404	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-1.4123
chr1	194571853	194571880	snRNA	ENSMUSG00000064881_U5	.	ENSMUSG00000064881	ProperStrand	187	chr15	79908931	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	4	-11.1535
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr19	8799831	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	2	-1.1464
chr3	135247636	135247674	protein_coding	Nfkb1	utr3	ENSMUSG00000028163	ProperStrand	55	chr18	35716811	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-4.1225
chr9	68614420	68614510	protein_coding	Rora	intron	ENSMUSG00000032238	NonProperStrand	30	chr14	120167671	120167761	protein_coding	Hs6st3	intron	ENSMUSG00000053465	ProperStrand	15	1	-17.6229
chr2	12941437	12941454	LTR	MTE2a	MaLR	chr2MTE2a12941159	NonProperStrand	42	chr2	144087414	144087463	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-7.2552
chr1	74784356	74784372	protein_coding	Cyp27a1	utr3	ENSMUSG00000026170	NonProperStrand	9	chr15	79908939	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-9.3140
chr6	52965701	52965718	protein_coding	Jazf1	intron	ENSMUSG00000063568	ProperStrand	43	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-5.8641
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr8	110077953	110077969	protein_coding	Wwp2	exon	ENSMUSG00000031930	ProperStrand	18	1	-11.1554
chr12	106002200	106002217	protein_coding	Clmn	utr3	ENSMUSG00000021097	ProperStrand	50	chr15	71624752	71624800	snoRNA	ENSMUSG00000088895_SNORA81	.	ENSMUSG00000088895	ProperStrand	348	1	-10.1582
chr16	24984504	24984520	protein_coding	Lpp	utr3	ENSMUSG00000033306	NonProperStrand	189	chr3	85904465	85904550	snoRNA	ENSMUSG00000065847_SNORA32	.	ENSMUSG00000065847	ProperStrand	40	2	-18.7219
chr11	32500864	32503675	protein_coding	Stk10	exon	ENSMUSG00000020272	NonProperStrand	73	chr19	8800084	8800109	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	2	-11.5903
chr2	121949510	121949526	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	chr11	6519852	6519943	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	3	-11.7146
chr19	5905512	5906580	protein_coding	Dpf2	exon	ENSMUSG00000024826	ProperStrand	38	chr12	112779240	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-5.6662
chr11	106643172	106643233	protein_coding	Ddx5	exon	ENSMUSG00000020719	ProperStrand	181	chr18	33954817	33954907	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-1.6319
chr17	46814084	46814100	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-5.3351
chr8	129465828	129465919	protein_coding	Tomm20	intron	ENSMUSG00000058779	ProperStrand	55	chr4	131908236	131908288	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.5458
chr18	67636633	67636652	protein_coding	Slmo1	exon	ENSMUSG00000024530	NonProperStrand	1	chr7	123476683	123476752	snoRNA	ENSMUSG00000064741_Snord14a	.	ENSMUSG00000064741	ProperStrand	83	1	-inf
chr7	53339460	53339477	protein_coding	Nomo1	utr3	ENSMUSG00000030835	NonProperStrand	4	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.0048
chr7	50693515	50693531	protein_coding	Nkg7	utr3	ENSMUSG00000004612	ProperStrand	2	chr18	35716831	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-9.2832
chr11	120824873	120824890	protein_coding	Csnk1d	utr3	ENSMUSG00000025162	NonProperStrand	10	chr7	117166721	117166744	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-8.4140
chr5	147646052	147646080	protein_coding	Rpl21	exon	ENSMUSG00000041453	ProperStrand	112	chrX	138159145	138159161	protein_coding	Irs4	exon	ENSMUSG00000054667	NonProperStrand	98	1	-11.0738
chr4	122536508	122536608	protein_coding	Cap1	utr3	ENSMUSG00000028656	ProperStrand	45	chr1	162965535	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.8074
chr17	46658280	46658297	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr10	79755546	79755564	protein_coding	Rps15	exon	ENSMUSG00000063457	ProperStrand	119	1	-7.8620
chr19	45835681	45835771	protein_coding	Mgea5	intron	ENSMUSG00000025220	ProperStrand	53	chr10	110918574	110918654	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-3.6779
chr12	11098613	11098629	protein_coding	Kcns3	exon	ENSMUSG00000043673	ProperStrand	19	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-8.1695
chr1	173433177	173433239	protein_coding	B930036N10Rik	utr3	ENSMUSG00000091993	ProperStrand	150	chr16	23111392	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	6	-4.0595
chr4	116003035	116010036	protein_coding	Mast2	exon	ENSMUSG00000003810	ProperStrand	37	chr2	26061878	26061894	protein_coding	Lhx3	exon	ENSMUSG00000026934	ProperStrand	4	1	-18.9976
chr2	127124489	127124540	protein_coding	Stard7	utr3	ENSMUSG00000027367	ProperStrand	12	chr7	117189945	117190035	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-10.5733
chr2	168364195	168364213	protein_coding	Nfatc2	intron	ENSMUSG00000027544	ProperStrand	13	chr1	181476981	181476997	protein_coding	Cnst	intron	ENSMUSG00000038949	ProperStrand	40	1	-17.3199
chr9	103084568	103084584	protein_coding	Rab6b	utr3	ENSMUSG00000032549	NonProperStrand	4	chr5	3693225	3693241	protein_coding	Ankib1	exon	ENSMUSG00000040351	NonProperStrand	98	1	-18.0384
chr4	133842946	133842965	protein_coding	Pdik1l	intron	ENSMUSG00000050890	ProperStrand	3	chr9	120037910	120038000	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	3	-inf
chrX	20252866	20253107	protein_coding	Uba1	exon	ENSMUSG00000001924	ProperStrand	156	chr2	84979459	84979476	protein_coding	Aplnr	utr3	ENSMUSG00000044338	ProperStrand	13	1	-14.5098
chr8	24337412	24337428	protein_coding	Gins4	utr3	ENSMUSG00000031546	ProperStrand	10	chr5	108334195	108334256	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-8.4182
chr11	69509377	69509393	protein_coding	BC096441	utr5	ENSMUSG00000018752	NonProperStrand	2	chr15	98684115	98684253	protein_coding	Mll2	exon	ENSMUSG00000048154	ProperStrand	170	1	-19.5134
chr16	91227718	91227735	protein_coding	Olig2	utr3	ENSMUSG00000039830	NonProperStrand	78	chr5	89663839	89663855	protein_coding	Slc4a4	exon	ENSMUSG00000060961	NonProperStrand	195	1	-10.4217
chr2	132119057	132119078	protein_coding	Cds2	exon	ENSMUSG00000058793	NonProperStrand	16	chr17	24857760	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	NonProperStrand	27	2	-19.3655
chr2	179913780	179913981	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr12	106269348	106269428	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-1.1259
chr1	88426697	88426757	protein_coding	Ptma	utr3	ENSMUSG00000026238	ProperStrand	385	chr10	120709244	120712786	protein_coding	Tbc1d30	exon	ENSMUSG00000052302	ProperStrand	233	1	-6.8866
chr5	121655061	121655151	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	chr12	110923173	110923231	snoRNA	ENSMUSG00000084487_SNORD113	.	ENSMUSG00000084487	ProperStrand	183	1	-1.8160
chr6	72278594	72278628	protein_coding	Usp39	exon	ENSMUSG00000056305	ProperStrand	16	chr7	118219574	118219673	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	6	-23.8581
chr8	111472413	111472454	protein_coding	Zfhx3	exon	ENSMUSG00000038872	ProperStrand	65	chr4	131865379	131865479	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-3.8521
chr14	87659491	87659512	LTR	MTEa	MaLR	chr14MTEa87659331	NonProperStrand	83	chr11	68886974	68887034	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-3.5382
chr2	153225695	153225726	protein_coding	Asxl1	exon	ENSMUSG00000042548	ProperStrand	76	chr4	131908236	131908292	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-2.1445
chr18	5456909	5456999	LTR	MT2A	ERVL	chr18MT2A5456758	NonProperStrand	1	chr18	5457032	5457112	Simple_repeat	(TAGA)n	Simple_repeat	chr18(TAGA)n5457045	NonProperStrand	1	1	-inf
chr8	125408117	125408181	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	chr1	72272818	72272908	snRNA	ENSMUSG00000075752_U2	.	ENSMUSG00000075752	ProperStrand	535	1	-5.2863
chr10	55648548	55648579	LTR	MER74B	ERVL	chr10MER74B55648363	NonProperStrand	1	chr19	55401096	55401113	protein_coding	Vti1a	intron	ENSMUSG00000024983	NonProperStrand	62	1	-inf
chr4	155501275	155501334	protein_coding	9430015G10Rik	utr3	ENSMUSG00000059939	ProperStrand	17	chr12	80334598	80334698	protein_coding	Zfyve26	utr3	ENSMUSG00000066440	ProperStrand	44	1	-16.5651
chr12	59283990	59284080	LINE	Lx8	L1	chr12Lx859283872	NonProperStrand	1	chr3	136150915	136150995	LINE	Lx3_Mus	L1	chr3Lx3_Mus136150563	ProperStrand	1	1	-inf
chr9	113571623	113580962	protein_coding	Pdcd6ip	exon	ENSMUSG00000032504	ProperStrand	53	chr18	73693108	73693132	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-5.7672
chr4	137309869	137309956	protein_coding	Alpl	exon	ENSMUSG00000028766	ProperStrand	80	chr7	137812904	137812921	protein_coding	Tacc2	intron	ENSMUSG00000030852	ProperStrand	95	1	-11.8119
chr2	179920584	179920630	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	chr5	111259875	111259892	protein_coding	Hscb	intron	ENSMUSG00000043510	ProperStrand	5	1	-14.8621
chr7	14206547	14206627	LINE	L1_Mus1	L1	chr7L1_Mus114206307	NonProperStrand	1	chrX	33926810	33926900	LINE	L1_Mus2	L1	chrXL1_Mus233926407	NonProperStrand	1	1	-inf
chr5	44212940	44212960	protein_coding	Bst1	exon	ENSMUSG00000029082	ProperStrand	1	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-inf
chr2	120747115	120747171	protein_coding	Ubr1	exon	ENSMUSG00000027272	ProperStrand	16	chr11	97642965	97643075	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	4	-15.8217
chr15	80064590	80064670	protein_coding	Smcr7l	utr5	ENSMUSG00000022412	ProperStrand	19	chr8	73419695	73419785	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-5.3188
chr6	87853518	87853547	protein_coding	Copg	exon	ENSMUSG00000030058	ProperStrand	68	chr9	15119646	15119697	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-4.2758
chr4	123060628	123061914	protein_coding	Macf1	exon	ENSMUSG00000028649	ProperStrand	320	chr5	121655082	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-2.0151
chr1	181476979	181476995	protein_coding	Cnst	intron	ENSMUSG00000038949	ProperStrand	40	chr17	35299577	35299641	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-5.5666
chr11	97550974	97551036	protein_coding	Pcgf2	utr3	ENSMUSG00000018537	ProperStrand	31	chr9	120039249	120039349	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	1	-10.8563
chr9	110589180	110589250	protein_coding	Ccdc12	intron	ENSMUSG00000019659	ProperStrand	7	chr6	83111875	83111891	protein_coding	1700003E16Rik	exon	ENSMUSG00000030030	ProperStrand	352	1	-14.1966
chr2	131039092	131039114	protein_coding	2310035K24Rik	utr3	ENSMUSG00000068264	ProperStrand	2	chr17	35088957	35088999	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-13.2951
chr2	26493462	26493511	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr12	85350481	85350499	protein_coding	Acot1	utr5	ENSMUSG00000072949	ProperStrand	72	1	-5.8358
chr10	87820027	87820043	protein_coding	Dram1	intron	ENSMUSG00000020057	ProperStrand	24	chr5	74489581	74489674	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	5	-inf
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	169561767	169561785	protein_coding	Tshz2	intron	ENSMUSG00000047907	ProperStrand	14	1	-7.3487
chr1	154946513	154946531	protein_coding	Nmnat2	intron	ENSMUSG00000042751	ProperStrand	39	chr10	23505243	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.8710
chr5	21270693	21270709	protein_coding	Dnajc2	intron	ENSMUSG00000029014	NonProperStrand	5	chr9	120037944	120038052	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-9.7957
chr7	133436118	133436190	protein_coding	Sbk1	utr3	ENSMUSG00000042978	ProperStrand	24	chr18	35714193	35714283	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-5.1913
chr10	82212894	82212911	protein_coding	Nfyb	utr3	ENSMUSG00000020248	NonProperStrand	1	chr8	73419877	73419926	protein_coding	Rpl18a	exon	ENSMUSG00000045128	ProperStrand	394	1	-inf
chr8	109708550	109708634	protein_coding	Cyb5b	utr3	ENSMUSG00000031924	ProperStrand	39	chr4	131866169	131866259	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-4.4791
chr7	13894524	13896364	protein_coding	Lig1	exon	ENSMUSG00000056394	ProperStrand	89	chr10	80641723	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	4	-19.4564
chr4	117317816	117317929	protein_coding	Eri3	intron	ENSMUSG00000033423	ProperStrand	246	chr9	15118563	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	1	-6.5346
chr2	120648341	120675804	protein_coding	Ttbk2	utr5	ENSMUSG00000090100	ProperStrand	50	chr5	115940291	115940407	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	1	-9.1019
chr3	67161283	67161299	protein_coding	Rsrc1	utr3	ENSMUSG00000034544	NonProperStrand	71	chr17	39985307	39985356	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-5.6020
chr5	148485141	148485241	protein_coding	Flt1	exon	ENSMUSG00000029648	ProperStrand	10	chr11	62416597	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-8.7767
chr4	138973198	138973242	protein_coding	Ubr4	exon	ENSMUSG00000066036	ProperStrand	304	chr5	108336363	108336408	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-1.9617
chr8	98396234	98398325	protein_coding	Got2	exon	ENSMUSG00000031672	ProperStrand	85	chr11	77995188	77995248	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-5.4994
chr7	82915036	82915062	LTR	RLTR19-int	ERVK	chr7RLTR19-int82914796	ProperStrand	5	chr18	68003569	68003587	protein_coding	Cep192	intron	ENSMUSG00000024542	NonProperStrand	16	1	-19.8777
chr2	119608827	119608863	protein_coding	Rpap1	exon	ENSMUSG00000034032	ProperStrand	96	chr11	69483136	69483194	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.6891
chr1	88070205	88073400	protein_coding	Armc9	exon	ENSMUSG00000062590	ProperStrand	2	chr10	23505152	23505204	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-8.0476
chr16	57391594	57391790	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr18	35716682	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	NonProperStrand	45	6	-20.2915
chr2	90235299	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	37218956	37218972	protein_coding	Robo4	exon	ENSMUSG00000032125	NonProperStrand	4	1	-10.0500
chr11	50194244	50194295	protein_coding-noncoding	Hnrnph1	utr5	ENSMUSG00000007850	ProperStrand	13	chr11	51551279	51551335	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	1	-10.8055
chr15	102158930	102159020	protein_coding	Pfdn5	intron	ENSMUSG00000001289	ProperStrand	6	chr16	23110891	23110971	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.7876
chr7	13563611	13563628	protein_coding	Zfp446	utr5	ENSMUSG00000033961	NonProperStrand	1	chr2	158185586	158185653	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-inf
chr11	3649570	3649587	protein_coding	Osbp2	intron	ENSMUSG00000020435	ProperStrand	60	chr7	52381973	52382010	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-6.7119
chr7	31895791	31899711	protein_coding	Hpn	utr5	ENSMUSG00000001249	ProperStrand	126	chr16	23110455	23110509	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.3031
chr4	6323665	6323741	protein_coding	Nsmaf	utr3	ENSMUSG00000028245	ProperStrand	15	chr16	23110530	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	4	-16.1378
chr11	20124878	20124968	protein_coding	Rab1	utr3	ENSMUSG00000020149	ProperStrand	32	chr5	74489595	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-4.9789
chrX	96638944	96638961	lincRNA	Gm14812	intron	ENSMUSG00000073051	NonProperStrand	13	chr15	79908932	79908956	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-8.5451
chr4	147906074	147906127	protein_coding	Mtor	intron	ENSMUSG00000028991	ProperStrand	65	chr7	109149271	109149287	protein_coding	Numa1	exon	ENSMUSG00000066306	NonProperStrand	171	1	-11.0509
chr10	82418136	82418157	LTR	MT2B2	ERVL	chr10MT2B282418137	NonProperStrand	12	chr7	116664815	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-5.5966
chr1	158563232	158563323	protein_coding	Abl2	exon	ENSMUSG00000026596	ProperStrand	37	chr16	23110941	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.7935
chr2	89368462	89368479	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	chr5	130300471	130300547	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-1.0779
chr2	121885287	121885447	protein_coding	Spg11	exon	ENSMUSG00000033396	NonProperStrand	5	chr1	89673629	89673729	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-8.2536
chr14	17263686	17263703	protein_coding	Rarb	utr3	ENSMUSG00000017491	ProperStrand	6	chr9	120039623	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-7.9123
chr11	116535923	116535982	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr16	85802547	85802564	protein_coding	Adamts1	exon	ENSMUSG00000022893	ProperStrand	102	1	-4.8777
chr6	88435849	88435865	protein_coding	Ruvbl1	exon	ENSMUSG00000030079	NonProperStrand	54	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-6.8002
chr5	144015064	144015081	protein_coding	Zfp316	exon	ENSMUSG00000046658	NonProperStrand	4	chr12	17552950	17553040	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-10.7041
chr14	79690107	79691488	protein_coding	1190002H23Rik	exon	ENSMUSG00000022018	NonProperStrand	6	chr19	8963087	8963111	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-6.7266
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr17	13112503	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	3	-3.7056
chr16	18251710	18251742	protein_coding	Trmt2a	exon	ENSMUSG00000022721	ProperStrand	28	chr11	6428088	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-7.7062
chr12	55797776	55797866	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	chr4	122970396	122970449	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	2	-3.8204
chr15	31531373	31531437	protein_coding	Cct5	exon	ENSMUSG00000022234	ProperStrand	116	chr8	32260335	32260428	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-3.3936
chr10	79322160	79322234	protein_coding	Ptbp1	exon	ENSMUSG00000006498	ProperStrand	129	chr3	123210881	123210971	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	6	-7.8119
chr2	30681042	30681058	protein_coding	Asb6	exon	ENSMUSG00000039483	ProperStrand	8	chr4	131908416	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-5.0428
chr14	31332519	31332587	protein_coding	Dcp1a	exon	ENSMUSG00000021962	ProperStrand	20	chr4	138966584	138966605	protein_coding	Ubr4	exon	ENSMUSG00000066036	ProperStrand	304	1	-12.2887
chr8	13416897	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr4	135327523	135329683	protein_coding	Myom3	exon	ENSMUSG00000037139	NonProperStrand	62	1	-6.3894
chr13	110693373	110693391	protein_coding	Pde4d	utr5	ENSMUSG00000021699	NonProperStrand	36	chr11	72257563	72257580	protein_coding	Mybbp1a	exon	ENSMUSG00000040463	ProperStrand	279	1	-11.2635
chr5	76975519	76975561	protein_coding	Exoc1	intron	ENSMUSG00000036435	ProperStrand	12	chr19	8963137	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-8.7833
chr11	109081339	109081355	SINE	B3A	B2	chr11B3A109081325	ProperStrand	5	chr4	131865854	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-6.5022
chr14	99467261	99467329	protein_coding	6720463M24Rik	exon	ENSMUSG00000022070	ProperStrand	23	chr7	129059283	129060041	protein_coding	Scnn1b	exon	ENSMUSG00000030873	ProperStrand	26	1	-16.8020
chr11	70518679	70518728	protein_coding	Kif1c	exon	ENSMUSG00000020821	ProperStrand	26	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-8.6024
chr15	82686791	82686828	protein_coding	Tcf20	exon	ENSMUSG00000041852	ProperStrand	658	chr7	52382752	52382822	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-2.2676
chr10	44878213	44878313	protein_coding	Prep	exon	ENSMUSG00000019849	ProperStrand	21	chr5	74489649	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-5.8101
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr6	87040629	87040675	protein_coding	Gfpt1	utr3	ENSMUSG00000029992	ProperStrand	22	1	-10.8195
chr19	5799440	5799470	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr11	87240282	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	1	-5.2650
chr10	75322121	75322221	protein_coding	Mif	utr3	ENSMUSG00000033307	ProperStrand	146	chr3	123210854	123210874	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-0.8142
chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	chr6	67217090	67217149	protein_coding	Serbp1	exon	ENSMUSG00000036371	ProperStrand	261	2	-10.2738
chr9	20467864	20467964	protein_coding	Pin1	utr3	ENSMUSG00000032171	ProperStrand	17	chr9	120039588	120039625	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-5.7441
chr13	19684241	19684257	protein_coding	Epdr1	utr3	ENSMUSG00000002808	ProperStrand	46	chr4	109105596	109105613	protein_coding	Ttc39a	exon	ENSMUSG00000028555	ProperStrand	51	1	-14.1810
chr2	101792175	101792230	protein_coding	Ldlrad3	utr3	ENSMUSG00000048058	ProperStrand	53	chr18	35716787	35716876	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-6.3555
chrX	47961742	47961871	lincRNA	6720401G13Rik	intron	ENSMUSG00000085396	ProperStrand	34	chr18	36961595	36961662	misc_RNA	Vault	.	ENSMUSG00000065145	ProperStrand	177	1	-12.2896
chr2	6241677	6241694	antisense	A230108P19Rik	.	ENSMUSG00000087125	NonProperStrand	3	chr7	117189951	117190041	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-9.5269
chr4	140348961	140349034	protein_coding	Padi3	exon	ENSMUSG00000025328	ProperStrand	12	chr11	69481387	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	4	-19.0671
chr7	107568381	107618326	protein_coding	C2cd3	exon	ENSMUSG00000047248	ProperStrand	11	chr11	97642952	97643075	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-9.4094
chr17	24570124	24570158	protein_coding	Eci1	exon	ENSMUSG00000024132	ProperStrand	6	chr1	89673606	89673706	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-7.8515
chr17	27254716	27254806	protein_coding	Itpr3	exon	ENSMUSG00000042644	ProperStrand	137	chr7	116663633	116663711	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.2287
chr5	30969804	30976610	protein_coding	Cenpa	intron	ENSMUSG00000029177	ProperStrand	18	chr16	23110967	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-7.3571
chr4	149459310	149459327	LINE	L1ME2z	L1	chr4L1ME2z149458870	ProperStrand	12	chr7	117166722	117166860	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-8.0340
chr7	108494740	108494798	protein_coding	Stard10	utr3	ENSMUSG00000030688	ProperStrand	1	chr11	69483151	69483241	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-inf
chrX	114243066	114243082	LTR	RMER17A	ERVK	chrXRMER17A114242558	NonProperStrand	1	chr5	143563116	143563133	protein_coding	Tnrc18	intron	ENSMUSG00000039477	ProperStrand	39	1	-inf
chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	chr18	73693124	73693186	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	2	-0.9648
chr19	5797243	5797323	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr12	30675826	30678281	protein_coding	Pxdn	exon	ENSMUSG00000020674	ProperStrand	33	1	-8.7443
chr5	100855903	100855974	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr9	120038556	120038675	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	13	-2.0536
chr16	22251008	22251032	protein_coding	Tra2b	exon	ENSMUSG00000022858	ProperStrand	32	chr14	55476645	55476661	protein_coding	Homez	exon	ENSMUSG00000057156	NonProperStrand	127	1	-13.0794
chr6	136515210	136515244	protein_coding	Atf7ip	exon	ENSMUSG00000030213	ProperStrand	22	chr17	24857716	24857775	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.1130
chr15	79497921	79498013	protein_coding	Cby1	utr3	ENSMUSG00000022428	ProperStrand	7	chr11	62416630	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	6	-inf
chr2	26768368	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	chr1	162967489	162967561	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	41	-19.8884
chr9	21441860	21441960	protein_coding	Smarca4	exon	ENSMUSG00000032187	ProperStrand	196	chr1	89673764	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-1.3236
chr16	17841860	17841950	protein_coding	Dgcr2	utr3	ENSMUSG00000003166	ProperStrand	45	chr19	8963085	8963165	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.7687
chr1	135518128	135556139	protein_coding	Zc3h11a	intron	ENSMUSG00000026464	ProperStrand	102	chr10	23505171	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-1.2893
chrX	58225380	58225396	pseudogene	Rpl7l1-ps1	.	ENSMUSG00000081323	ProperStrand	46	chr2	130101971	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-5.8775
chr19	47202818	47202835	protein_coding	Pdcd11	exon	ENSMUSG00000025047	ProperStrand	137	chr4	116828379	116828429	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-6.7401
chr16	30514154	30514171	protein_coding	Tmem44	utr3	ENSMUSG00000022537	ProperStrand	217	chr9	120039568	120039614	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.2259
chr9	42259760	42259784	protein_coding	Tbcel	exon	ENSMUSG00000037287	ProperStrand	15	chr8	94179957	94179974	protein_coding	Fto	intron	ENSMUSG00000055932	NonProperStrand	12	1	-19.6590
chr2	28925557	28926877	protein_coding	Ttf1	exon	ENSMUSG00000026803	ProperStrand	15	chr18	35716828	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.7126
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	115999916	115999932	protein_coding	Mrpl38	exon	ENSMUSG00000020775	NonProperStrand	65	2	-7.1973
chr18	63238393	63238412	protein_coding	Fam38b	exon	ENSMUSG00000041482	NonProperStrand	50	chr4	131865868	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-5.6670
chr13	31651447	31651465	protein_coding	Foxq1	exon	ENSMUSG00000038415	ProperStrand	18	chr12	17552949	17553020	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-7.4836
chr11	77996557	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	chr11	83107805	83107872	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	1	-1.9775
chr1	172612010	172612026	protein_coding	Olfml2b	exon	ENSMUSG00000038463	ProperStrand	57	chr16	23111395	23111414	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.3302
chr4	126802031	126802121	protein_coding	Gm12942	intron	ENSMUSG00000070737	ProperStrand	30	chr16	23110909	23110989	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0481
chr17	29433576	29433633	protein_coding	BC004004	exon	ENSMUSG00000052712	ProperStrand	5	chr18	35716767	35716830	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-6.9999
chr3	151960148	151980600	protein_coding	Fam73a	exon	ENSMUSG00000054942	ProperStrand	34	chr14	33005065	33005138	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-5.0835
chr10	45097382	45097472	protein_coding	Lin28b	utr3	ENSMUSG00000063804	ProperStrand	26	chr16	23111701	23111781	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.3497
chr4	131908823	131908903	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	chr14	76372311	76372401	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	12	-1.8943
chr9	59504421	59513051	protein_coding	Pkm2	utr5	ENSMUSG00000032294	ProperStrand	1296	chr13	51743660	51743704	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-1.3128
chr6	79311753	79311773	LTR	RMER5	ERV1	chr6RMER579311672	NonProperStrand	2	chr2	57090809	57090826	protein_coding	Gpd2	utr5	ENSMUSG00000026827	ProperStrand	93	1	-20.0851
chr18	74378303	74378397	protein_coding	Cxxc1	exon	ENSMUSG00000024560	NonProperStrand	19	chr4	131908833	131908890	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.0948
chr15	85054806	85057459	protein_coding	Fbln1	exon	ENSMUSG00000006369	ProperStrand	32	chr5	121655021	121655125	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-8.1896
chr2	180373159	180373179	protein_coding	Tcfl5	exon	ENSMUSG00000038932	ProperStrand	11	chr1	138178661	138178677	protein_coding	Camsap2	exon	ENSMUSG00000041570	NonProperStrand	116	1	-15.4384
chr14	25228112	25228131	LTR	ETnERV2-int	ERVK	chr14ETnERV2-int25227925	NonProperStrand	14	chr7	52382755	52382832	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-9.6945
chr17	3190258	3190275	protein_coding	Scaf8	exon	ENSMUSG00000046201	NonProperStrand	6	chr4	131908819	131908868	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.3738
chr10	120849872	120849924	protein_coding	Rassf3	utr3	ENSMUSG00000025795	ProperStrand	26	chr3	108357354	108357454	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-6.1769
chr14	51427184	51427203	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr7	30972323	30972357	protein_coding	Capns1	utr3	ENSMUSG00000001794	ProperStrand	35	1	-8.2885
chr6	24522085	24522101	protein_coding	Asb15	utr3	ENSMUSG00000029685	NonProperStrand	14	chr11	106362303	106362322	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-8.7702
chr4	55431652	55431668	lincRNA	Gm12505	exon	ENSMUSG00000087070	ProperStrand	447	chr2	164828235	164828344	protein_coding	Ncoa5	exon	ENSMUSG00000039804	ProperStrand	3	1	-15.6839
chr8	74126057	74126073	protein_coding	Fam129c	exon	ENSMUSG00000043243	NonProperStrand	6	chr18	35716685	35716746	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-6.6008
chr3	108005534	108005634	protein_coding	Atxn7l2	intron	ENSMUSG00000048997	ProperStrand	45	chr10	110918616	110918693	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-3.9843
chr17	45706262	45706303	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-1.9691
chr4	135327523	135329683	protein_coding	Myom3	exon	ENSMUSG00000037139	NonProperStrand	62	chr7	116663712	116663745	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.4557
chr19	53406810	53406826	protein_coding	Mxi1	intron	ENSMUSG00000025025	ProperStrand	51	chr6	21767464	21767480	protein_coding	Tspan12	intron	ENSMUSG00000029669	ProperStrand	8	1	-17.7327
chr6	82676822	82676869	protein_coding	Hk2	utr3	ENSMUSG00000000628	ProperStrand	88	chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	1	-8.4210
chr17	56257328	56257344	LTR	RLTR25B	ERVK	chr17RLTR25B56257276	NonProperStrand	75	mmu-miR-709	1	18	miRNA	mmu-miR-709	.	mmu-miR-709	ProperStrand	20	1	-15.0883
chr19	10701167	10701231	protein_coding	Ddb1	exon	ENSMUSG00000024740	ProperStrand	304	chr13	58400751	58400770	protein_coding	Kif27	intron	ENSMUSG00000060176	ProperStrand	75	1	-9.6133
chr8	13416897	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr2	150172172	150172225	protein_coding	3300002I08Rik	intron	ENSMUSG00000063364	NonProperStrand	8	1	-10.5674
chr5	145532369	145532394	protein_coding	Trrap	intron	ENSMUSG00000045482	ProperStrand	399	chr2	130101241	130101308	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-2.9865
chr1	162967518	162967542	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	chr12	60235076	60235135	snoRNA	ENSMUSG00000077505_SNORA26	.	ENSMUSG00000077505	ProperStrand	82	1	-2.9104
chrX	97821530	97821590	protein_coding	Kif4	utr5	ENSMUSG00000034311	ProperStrand	24	chr5	136673671	136673687	protein_coding	Prkrip1	exon	ENSMUSG00000039737	NonProperStrand	30	1	-16.6182
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr8	73115775	73115791	protein_coding	Ell	utr3	ENSMUSG00000070002	NonProperStrand	134	1	-2.9762
chr11	6375964	6375981	antisense	Gm11973	.	ENSMUSG00000086839	NonProperStrand	6	chr11	118122859	118123307	protein_coding	Usp36	utr3	ENSMUSG00000033909	ProperStrand	27	2	-19.9403
chr7	118218391	118218550	protein_coding	Eif4g2	exon	ENSMUSG00000005610	ProperStrand	134	chr5	74489563	74489653	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-2.3469
chr14	35157215	35157260	protein_coding	Glud1	utr3	ENSMUSG00000021794	ProperStrand	72	chr16	15634606	15634626	protein_coding	Mcm4	exon	ENSMUSG00000022673	ProperStrand	51	1	-13.2756
chr19	13345120	13345137	LINE	L1_Mur2	L1	chr19L1_Mur213344851	NonProperStrand	5	chrX	84483699	84483748	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-13.4112
chr5	142459850	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	chr10	110918550	110918597	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-1.2440
chr8	35782897	35782914	LINE	Lx8	L1	chr8Lx835782461	ProperStrand	25	chr2	26493486	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	1	-7.9441
chr1	130120067	130120157	protein_coding	R3hdm1	exon	ENSMUSG00000056211	ProperStrand	43	chr4	131908773	131908863	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.7076
chr17	50244364	50244381	protein_coding	Rftn1	intron	ENSMUSG00000039316	ProperStrand	11	chr4	118973561	118973604	protein_coding	Ppih	intron	ENSMUSG00000060288	ProperStrand	10	1	-19.9045
chr18	68473762	68473800	protein_coding	Rnmt	exon	ENSMUSG00000009535	ProperStrand	21	chr11	69483203	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	4	-14.2346
chr9	59518324	59518368	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chrX	138159145	138159161	protein_coding	Irs4	exon	ENSMUSG00000054667	NonProperStrand	98	1	-6.2075
chr18	64328476	64328492	antisense	1700091E21Rik	.	ENSMUSG00000086128	NonProperStrand	35	chr8	35161873	35161925	protein_coding	Dctn6	intron	ENSMUSG00000031516	ProperStrand	2	1	-inf
chr8	13416897	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr5	45898354	45898427	protein_coding	Lap3	exon	ENSMUSG00000039682	ProperStrand	87	3	-13.2385
chr7	52381089	52382430	protein_coding	Rpl13a	exon	ENSMUSG00000074129	ProperStrand	269	chr19	8800377	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	6	-8.3875
chr9	96978092	96978139	protein_coding	Slc25a36	utr3	ENSMUSG00000032449	ProperStrand	159	chr16	23110553	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-3.1905
chr19	14592301	14592391	protein_coding	Tle4	exon	ENSMUSG00000024642	ProperStrand	23	chr11	69483184	69483264	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-4.1990
chr19	10686186	10687413	protein_coding	Ddb1	exon	ENSMUSG00000024740	ProperStrand	304	chr5	130295490	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-2.2718
chr2	79132657	79132674	protein_coding-noncoding	Itga4	utr5	ENSMUSG00000027009	NonProperStrand	118	chr15	82980098	82980224	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	3	-13.3972
chr3	42481419	42481443	LINE	Lx2	L1	chr3Lx242480947	ProperStrand	3	chrX	71517838	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	3	-inf
chr17	18927673	18927763	LTR	IAPEY3-int	ERVK	chr17IAPEY3-int18927074	NonProperStrand	1	chr7	54443488	54443568	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-inf
chr2	89368462	89368478	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	chr18	35716811	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	5	-3.1470
chr11	95753188	95753278	protein_coding	B4galnt2	exon	ENSMUSG00000013418	ProperStrand	4	chr17	24857717	24857797	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-7.6570
chr2	165904622	165904638	protein_coding	Sulf2	exon	ENSMUSG00000006800	ProperStrand	171	chr1	93263064	93263081	protein_coding	Fam132b	exon	ENSMUSG00000047443	NonProperStrand	98	1	-10.2264
chr2	91436235	91436335	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	chr13	49779667	49779802	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	2	-3.0580
chr5	151755614	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr12	112779190	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	2	-0.9564
chr5	113524786	113524825	protein_coding	2900026A02Rik	intron	ENSMUSG00000051339	ProperStrand	3	chr9	120039557	120039657	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-9.5119
chr2	75753623	75753682	protein_coding	Agps	intron	ENSMUSG00000042410	ProperStrand	22	chr4	131908703	131908793	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.8292
chr10	85855414	85855431	protein_coding	Syn3	intron	ENSMUSG00000059602	NonProperStrand	40	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.4299
chr19	44188386	44188454	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr6	146768900	146768916	protein_coding	Arntl2	intron	ENSMUSG00000040187	NonProperStrand	1	1	-inf
chr11	102723981	102724000	protein_coding	Eftud2	exon	ENSMUSG00000020929	ProperStrand	86	chr7	133941058	133941202	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	1	-7.6218
chrX	20295896	20296192	protein_coding	Usp11	exon	ENSMUSG00000031066	ProperStrand	29	chr16	23111772	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.1494
chr16	57391631	57391671	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr5	108336371	108336471	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	NonProperStrand	8	1	-14.4359
chr10	80183869	80185663	protein_coding	Ap3d1	exon	ENSMUSG00000020198	ProperStrand	42	chr19	8799048	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-6.5374
chr8	98293747	98294521	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	chr11	62416635	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-2.1434
chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-1.6115
chr11	102775668	102775717	protein_coding	Kif18b	exon	ENSMUSG00000051378	ProperStrand	43	chr2	26493365	26493465	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-4.3715
chr17	35822057	35822257	protein_coding	Ddr1	exon	ENSMUSG00000003534	ProperStrand	129	chr9	15119630	15119727	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-2.6578
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr9	110544350	110544366	protein_coding	Nbeal2	exon	ENSMUSG00000056724	ProperStrand	161	1	-7.3995
chr9	118990864	118990964	protein_coding	Plcd1	intron	ENSMUSG00000010660	ProperStrand	15	chr15	79908929	79908956	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-8.2499
chr2	181316563	181316579	protein_coding	Uckl1	exon	ENSMUSG00000089917	ProperStrand	142	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.8102
chr8	83263055	83263112	protein_coding	Smarca5	utr5	ENSMUSG00000031715	ProperStrand	115	chrX	149828130	149828146	protein_coding	Klf8	utr3	ENSMUSG00000041649	NonProperStrand	107	1	-10.8447
chr1	88248602	88248662	snoRNA	ENSMUSG00000064696_SNORD20	.	ENSMUSG00000064696	ProperStrand	89	chr7	29136575	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.7281
chr10	126624931	126625016	protein_coding	Arhgef25	intron	ENSMUSG00000019467	ProperStrand	12	chr1	162968238	162968289	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-10.0801
chr2	28532064	28534518	protein_coding	Tsc1	exon	ENSMUSG00000026812	ProperStrand	29	chr3	123210855	123210935	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.3336
chr11	27348840	27348856	LTR	RLTR41	ERV1	chr11RLTR4127348710	ProperStrand	3	chr13	49173566	49174086	protein_coding	Wnk2	exon	ENSMUSG00000037989	ProperStrand	20	1	-inf
chr9	39358287	39358304	protein_coding	Olfr958	exon	ENSMUSG00000050853	NonProperStrand	266	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-3.7213
chr17	6009599	6009625	protein_coding	Synj2	intron	ENSMUSG00000023805	NonProperStrand	3	chr6	124665249	124665311	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	1	-13.2862
chr11	22736446	22736503	protein_coding	Commd1	utr3	ENSMUSG00000051355	ProperStrand	36	chr16	23110527	23110580	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-5.7753
chr17	12875497	12875597	protein_coding	Igf2r	utr3	ENSMUSG00000023830	ProperStrand	151	chr7	52381973	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	2	-8.0912
chr5	113370707	113370723	protein_coding	Adrbk2	exon	ENSMUSG00000042249	ProperStrand	56	chr19	8798740	8798759	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-4.9343
chr8	87367971	87368083	protein_coding	Calr	exon	ENSMUSG00000003814	ProperStrand	232	chr1	162966011	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-1.3486
chr17	45710119	45710163	protein_coding	Hsp90ab1	utr5	ENSMUSG00000023944	ProperStrand	1627	chr7	52381973	52382010	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-0.9205
chr5	100821434	100821547	protein_coding	Sec31a	exon	ENSMUSG00000035325	ProperStrand	61	chr11	77926370	77926400	protein_coding	BC017647	intron	ENSMUSG00000037750	ProperStrand	19	2	-19.5274
chr2	29849822	29881705	protein_coding	Spna2	exon	ENSMUSG00000057738	ProperStrand	222	chr16	23110829	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	13	-2.5829
chr15	84770634	84770715	protein_coding	Nup50	utr3	ENSMUSG00000016619	ProperStrand	39	chr14	34221298	34221314	protein_coding	Mapk8	exon	ENSMUSG00000021936	ProperStrand	2	1	-20.0516
chr17	75790277	75790293	protein_coding	Ltbp1	utr3	ENSMUSG00000001870	NonProperStrand	66	chr11	6428103	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.0209
chr14	72301755	72301771	SINE	B4	B4	chr14B472301692	NonProperStrand	99	chr11	69481338	69481384	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-2.3258
chr5	122916074	122916841	protein_coding	Atp2a2	exon	ENSMUSG00000029467	ProperStrand	166	chr4	40226301	40226369	protein_coding	Ndufb6	exon	ENSMUSG00000071014	ProperStrand	12	2	-inf
chr16	91729698	91729723	protein_coding	Itsn1	utr5	ENSMUSG00000022957	ProperStrand	172	chrX	138159145	138159161	protein_coding	Irs4	exon	ENSMUSG00000054667	NonProperStrand	98	1	-10.2147
chr8	121070498	121070517	protein_coding	Cdh13	intron	ENSMUSG00000031841	ProperStrand	60	chr11	97643061	97643079	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.4717
chr14	45938146	45938170	protein_coding	Ero1l	utr5	ENSMUSG00000021831	ProperStrand	18	chr16	23110852	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-5.2074
chr6	23377308	23377324	protein_coding	Cadps2	exon	ENSMUSG00000017978	ProperStrand	9	chr2	26494766	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-6.8145
chr5	31376706	31377039	protein_coding	Cad	exon	ENSMUSG00000013629	NonProperStrand	6	chr12	113415100	113415117	protein_coding	Kif26a	exon	ENSMUSG00000021294	ProperStrand	8	1	-18.4474
chr3	137806520	137806536	protein_coding	Rg9mtd2	utr5	ENSMUSG00000004127	ProperStrand	3	chr6	96605723	96605740	protein_coding	Fam19a1	utr3	ENSMUSG00000059187	NonProperStrand	60	1	-21.0062
chrX	117423351	117423368	protein_coding	Pcdh11x	intron	ENSMUSG00000034755	ProperStrand	15	chr9	15119631	15119766	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.2385
chr1	115133844	115133864	LINE	Lx2A	L1	chr1Lx2A115133127	NonProperStrand	1	chr6	71832560	71832650	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-inf
chr5	74489227	74489317	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr14	65372811	65372890	snoRNA	ENSMUSG00000064442_SNORA36	.	ENSMUSG00000064442	ProperStrand	296	1	-2.6427
chr14	64147095	64147113	protein_coding	Mtmr9	exon	ENSMUSG00000035078	ProperStrand	14	chr7	148634769	148634836	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-6.8488
chr17	35971912	35971957	protein_coding	Tubb5	utr3	ENSMUSG00000001525	ProperStrand	624	chr18	75161129	75161173	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	2	-7.3476
chr11	61740375	61740465	protein_coding	Akap10	intron	ENSMUSG00000047804	ProperStrand	17	chr17	39985196	39985276	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	10	-inf
chr5	4360091	4360181	LTR	RMER17D2	ERVK	chr5RMER17D24359607	NonProperStrand	2	chr5	4360302	4360392	SINE	B4	B4	chr5B44360299	NonProperStrand	1	1	-inf
chr7	25785655	25785755	protein_coding	Atp1a3	exon	ENSMUSG00000040907	ProperStrand	66	chr11	62418049	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	3	-12.5420
chr3	95109896	95109913	protein_coding	Anxa9	intron	ENSMUSG00000015702	NonProperStrand	5	chr14	76247724	76247791	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-9.2340
chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	chr5	134715368	134716121	protein_coding	Gtf2i	utr3	ENSMUSG00000060261	ProperStrand	41	1	-9.5287
chr14	22489454	22489520	protein_coding	Myst4	exon	ENSMUSG00000021767	ProperStrand	151	chr11	95634339	95634358	protein_coding	Zfp652	intron	ENSMUSG00000075595	NonProperStrand	8	1	-15.5843
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr18	38116113	38116129	protein_coding	Rell2	exon	ENSMUSG00000044024	NonProperStrand	43	1	-9.3854
chr4	149012403	149021554	protein_coding	Clstn1	exon	ENSMUSG00000039953	ProperStrand	173	chr11	69481376	69481479	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	24	-inf
chr16	11990237	11990254	protein_coding	Shisa9	intron	ENSMUSG00000022494	ProperStrand	10	chr2	157262082	157262195	protein_coding	Src	intron	ENSMUSG00000027646	ProperStrand	32	1	-18.1595
chr15	92363659	92436299	protein_coding	Pdzrn4	intron	ENSMUSG00000036218	ProperStrand	3	chr4	131908809	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-inf
chr14	32479927	32479943	protein_coding	Btd	exon	ENSMUSG00000021900	NonProperStrand	74	chr9	15118247	15118283	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.0858
chr10	82456766	82456784	protein_coding	Chst11	intron	ENSMUSG00000034612	ProperStrand	170	chr2	26493415	26493473	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-3.4936
chr7	110322038	110322054	protein_coding	Olfr591	exon	ENSMUSG00000057461	NonProperStrand	1	chr1	72301656	72301769	snRNA	ENSMUSG00000093333_AC120136.3	.	ENSMUSG00000093333	ProperStrand	68	1	-inf
chr18	8020108	8020125	LTR	RLTR9C	ERVK	chr18RLTR9C8020032	NonProperStrand	6	chr5	121655016	121655091	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-8.3778
chr2	130489144	130489200	protein_coding	Ddrgk1	exon	ENSMUSG00000068290	ProperStrand	43	chr9	120038613	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	3	-9.0497
chr5	74489543	74489586	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr11	3293012	3309057	protein_coding	Limk2	exon	ENSMUSG00000020451	ProperStrand	100	1	-4.6323
chr3	37603962	37603981	LINE	Lx6	L1	chr3Lx637603568	NonProperStrand	3	chr1	135028116	135028201	protein_coding	Ppp1r15b	utr5	ENSMUSG00000046062	ProperStrand	46	3	-inf
chr13	94211421	94211511	protein_coding	Jmy	exon	ENSMUSG00000021690	ProperStrand	16	chr2	22895623	22895703	protein_coding	Abi1	utr5	ENSMUSG00000058835	ProperStrand	24	1	-17.7741
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr8	126955158	126955214	protein_coding	Pgbd5	intron	ENSMUSG00000050751	ProperStrand	20	1	-9.2402
chr7	123476507	123476554	protein_coding	Rps13	exon	ENSMUSG00000090862	ProperStrand	36	chr11	97642982	97643080	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.3797
chr5	64302140	64302225	protein_coding	Rell1	utr3	ENSMUSG00000047881	ProperStrand	24	chr16	23111394	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	5	-12.7174
chr8	72287172	72287188	protein_coding	Zfp866	utr3	ENSMUSG00000043090	NonProperStrand	134	chr10	90432673	90432690	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	1	-9.0083
chr3	105771040	105771084	protein_coding	Wdr77	utr3	ENSMUSG00000000561	ProperStrand	15	chr11	6428034	6428077	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.8593
chr1	181722522	181733704	protein_coding	Ahctf1	utr5	ENSMUSG00000026491	ProperStrand	39	chr4	131865411	131865513	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	3	-11.4772
chr2	76471660	76471676	protein_coding	Prkra	exon	ENSMUSG00000002731	NonProperStrand	65	chr2	130101987	130102056	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	2	-8.5495
chr4	140563452	140563542	LTR	RLTR10C	ERVK	chr4RLTR10C140563264	ProperStrand	1	chr1	90167361	90167451	protein_coding-noncoding	Hjurp	utr3	ENSMUSG00000044783	NonProperStrand	2	1	-inf
chr13	104647548	104647565	protein_coding	Erbb2ip	exon	ENSMUSG00000021709	NonProperStrand	8	chr15	79908932	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-9.5642
chr13	13578931	13578948	protein_coding	Nid1	exon	ENSMUSG00000005397	ProperStrand	112	chr7	123476700	123476771	snoRNA	ENSMUSG00000064741_Snord14a	.	ENSMUSG00000064741	ProperStrand	83	1	-11.4071
chr8	89384365	89384455	protein_coding	N4bp1	exon	ENSMUSG00000031652	ProperStrand	98	chr7	116663634	116663714	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.7131
chr3	95634886	95637711	protein_coding	Prpf3	exon	ENSMUSG00000015748	ProperStrand	29	chr9	59799216	59799232	protein_coding	Nr2e3	intron	ENSMUSG00000032292	ProperStrand	2	1	-inf
chr11	69170097	69170113	protein_coding	Chd3	exon	ENSMUSG00000018474	NonProperStrand	8	chr16	23110984	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.2180
chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	chr15	98350209	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-0.8466
chr2	32881629	32881645	protein_coding	Garnl3	exon	ENSMUSG00000038860	NonProperStrand	54	chr5	121655028	121655097	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.9447
mmu-miR-1949	5	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr1	193178728	193178905	protein_coding	Ppp2r5a	exon	ENSMUSG00000026626	NonProperStrand	6	1	-12.9026
chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	chr5	121655105	121655147	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-0.7475
chr1	75532826	75532920	protein_coding	Stk11ip	utr3	ENSMUSG00000026213	ProperStrand	8	chr16	23110842	23110889	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-12.0409
chr4	129662259	129662276	protein_coding	Bai2	utr5	ENSMUSG00000028782	ProperStrand	119	chr6	118040235	118040251	protein_coding	Rasgef1a	utr3	ENSMUSG00000030134	NonProperStrand	7	1	-16.3878
chr4	43505700	43505930	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr6	121423179	121423195	protein_coding	Iqsec3	utr5	ENSMUSG00000040797	NonProperStrand	139	2	-3.0784
chr17	36097663	36097764	protein_coding	Abcf1	exon	ENSMUSG00000038762	ProperStrand	206	chrX	132673816	132673833	protein_coding	Bex4	intron	ENSMUSG00000047844	NonProperStrand	70	2	-16.5475
chr7	91900810	91900827	lincRNA	2610206C17Rik	intron	ENSMUSG00000085236	ProperStrand	13	chr7	29136554	29136575	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-8.6857
chr17	75010783	75010873	protein_coding	Birc6	exon	ENSMUSG00000024073	ProperStrand	110	chr1	88253574	88253654	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	1	-6.1573
chr17	78916019	78916036	protein_coding	Vit	intron	ENSMUSG00000024076	ProperStrand	4	chr2	6243832	6243848	protein_coding	Usp6nl	utr5	ENSMUSG00000039046	NonProperStrand	6	1	-19.4007
chr5	135718389	135718406	protein_coding	Baz1b	exon	ENSMUSG00000002748	ProperStrand	83	chr6	120479820	120479837	protein_coding	Cecr5	intron	ENSMUSG00000058979	ProperStrand	97	1	-11.6959
chr7	117422879	117424157	protein_coding	Swap70	exon	ENSMUSG00000031015	ProperStrand	47	chr2	26493369	26493449	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-7.0412
chr2	129998690	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	1	-4.6262
chr8	126554208	126554298	protein_coding	Urb2	exon	ENSMUSG00000031976	ProperStrand	64	chrX	34622911	34622991	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-3.0550
chr18	85746437	85746517	LINE	Lx8	L1	chr18Lx885746420	NonProperStrand	1	chr18	85746206	85746296	LTR	RMER19B	ERVK	chr18RMER19B85746105	ProperStrand	1	1	-inf
chr1	155325171	155325261	protein_coding	Dhx9	exon	ENSMUSG00000042699	ProperStrand	98	chr15	34370545	34370625	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	12	-21.4516
chr5	34976632	34976659	protein_coding	Mfsd10	exon	ENSMUSG00000001082	ProperStrand	38	chr10	83989627	83989643	protein_coding	Ckap4	utr3	ENSMUSG00000046841	ProperStrand	60	1	-14.2427
chr5	123297991	123298081	SINE	B1_Mur1	Alu	chr5B1_Mur1123297944	ProperStrand	1	chr8	16723292	16723382	protein_coding	Csmd1	intron	ENSMUSG00000060924	ProperStrand	19	1	-inf
chr16	60156791	60156808	protein_coding	Epha6	intron	ENSMUSG00000055540	NonProperStrand	14	chr8	32260335	32260424	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-7.5228
chr4	116875171	116875249	snRNA	ENSMUSG00000070228_U5	.	ENSMUSG00000070228	ProperStrand	131	chr9	120039587	120039677	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.9742
chr6	114260511	114260527	protein_coding	Slc6a1	exon	ENSMUSG00000030310	NonProperStrand	147	chr9	64022854	64022911	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	1	-6.2482
chr10	23505152	23505195	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	chr11	69482352	69482401	snoRNA	ENSMUSG00000089542_snoU6-77	.	ENSMUSG00000089542	ProperStrand	138	4	-2.2752
chr16	21990321	21990369	protein_coding	Liph	intron	ENSMUSG00000044626	ProperStrand	13	chr19	8798507	8798553	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	5	-19.5603
chr11	6165553	6165634	protein_coding	Ddx56	exon	ENSMUSG00000004393	ProperStrand	21	chr11	60597784	60597874	protein_coding	Smcr8	utr3	ENSMUSG00000049323	ProperStrand	46	14	-inf
chr13	25090497	25090550	protein_coding	Mrs2	intron	ENSMUSG00000021339	ProperStrand	4	chr18	35714247	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-8.9582
chr15	101760631	101761122	protein_coding	Krt79	exon	ENSMUSG00000061397	ProperStrand	2	chr1	88247804	88247861	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-12.5019
chrX	35929322	35929363	protein_coding	Cul4b	utr5	ENSMUSG00000031095	ProperStrand	31	chr11	87240282	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	1	-12.3253
chr5	115722767	115722803	protein_coding	Rnf10	utr5	ENSMUSG00000041740	ProperStrand	95	chr8	129468746	129468797	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-3.5517
chr8	98269958	98270096	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	chr19	8963026	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	28	-0.9760
chr18	73693110	73693185	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr12	60141397	60141509	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	2	-0.8471
chr10	53258357	53258373	protein_coding	Mcm9	exon	ENSMUSG00000058298	ProperStrand	24	chr11	6428035	6428088	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.9246
chr2	90235286	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	80965641	80965658	protein_coding	Accn1	exon	ENSMUSG00000020704	NonProperStrand	228	4	-7.7775
chr16	57391758	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr17	35088966	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	4	-4.7638
chr19	5685372	5685472	protein_coding	Pcnxl3	exon	ENSMUSG00000054874	ProperStrand	96	chr5	130295500	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-4.3444
chr4	117317936	117317956	protein_coding	Eri3	intron	ENSMUSG00000033423	ProperStrand	246	chr5	54389950	54389966	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	1	-7.9605
chr17	71194420	71194559	protein_coding	Tgif1	exon	ENSMUSG00000047407	ProperStrand	64	chr8	98269959	98269977	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	4	-16.5506
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	83198879	83198896	protein_coding	Slc4a5	intron	ENSMUSG00000068323	NonProperStrand	11	1	-7.8469
chr15	76342168	76342184	protein_coding	Dgat1	exon	ENSMUSG00000022555	ProperStrand	25	chr7	19846254	19846281	protein_coding	Vasp	exon	ENSMUSG00000030403	ProperStrand	28	1	-16.5905
chr7	141399351	141399367	protein_coding	Adam12	intron	ENSMUSG00000054555	NonProperStrand	49	chr1	162965980	162965996	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-3.9815
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr4	123133515	123133626	protein_coding	Macf1	exon	ENSMUSG00000028649	ProperStrand	320	1	-3.1785
chr11	69002198	69002214	protein_coding	Alox8	exon	ENSMUSG00000020891	NonProperStrand	31	chr8	13876126	13876226	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-8.4674
chr9	54768317	54768333	protein_coding	Agphd1	exon	ENSMUSG00000035878	NonProperStrand	19	chr7	148634752	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-6.2295
chr10	117227045	117227061	protein_coding	Nup107	exon	ENSMUSG00000052798	NonProperStrand	66	chr11	6520355	6520442	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	1	-7.5272
chr5	144645709	144645789	protein_coding	Eif2ak1	exon	ENSMUSG00000029613	ProperStrand	37	chrX	103389841	103390051	protein_coding	Pgk1	exon	ENSMUSG00000062070	ProperStrand	484	27	-19.2529
chr9	14553060	14553134	protein_coding	Fut4	utr3	ENSMUSG00000049307	ProperStrand	2	chr4	131908689	131908750	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-8.0336
chr2	26766780	26766855	snoRNA	ENSMUSG00000065258_SNORD24	.	ENSMUSG00000065258	ProperStrand	130	chr11	106362669	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	2	-9.5604
chr16	72800514	72800532	protein_coding	Robo1	intron	ENSMUSG00000022883	NonProperStrand	188	chr11	6428107	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.3267
chr16	21273951	21273968	lincRNA	Gm16863	intron	ENSMUSG00000086616	NonProperStrand	4	chr8	13876096	13876157	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-12.8050
chr14	45949538	45949554	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	chr5	108336363	108336414	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-1.8515
chr1	95262404	95262421	protein_coding	Ppp1r7	utr3	ENSMUSG00000026275	NonProperStrand	2	chr3	123210945	123210974	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-9.1566
chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	chr5	122894200	122894239	protein_coding	Anapc7	utr3	ENSMUSG00000029466	ProperStrand	11	1	-12.9084
chr15	97533742	97533770	protein_coding	Rpap3	exon	ENSMUSG00000022466	ProperStrand	13	chr18	33954816	33954906	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-10.5963
chrX	74762861	74762929	protein_coding	Tbl1x	intron	ENSMUSG00000025246	ProperStrand	56	chr13	107685893	107687332	protein_coding	Ipo11	exon	ENSMUSG00000042590	ProperStrand	120	3	-20.0586
chr15	12066329	12066363	protein_coding	Zfr	exon	ENSMUSG00000022201	ProperStrand	48	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-8.6063
chr11	3542024	3542042	lincRNA	Tug1	exon	ENSMUSG00000056579	NonProperStrand	3	chr16	55895054	55895073	protein_coding	Fam55c	utr5	ENSMUSG00000075033	NonProperStrand	5	1	-inf
chr10	80950302	80950331	protein_coding	Ncln	exon	ENSMUSG00000020238	ProperStrand	18	chr2	26768071	26768119	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	2	-16.9921
chr11	6428035	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr9	120039533	120039682	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	58	-1.7706
chr5	92485086	92485218	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	chr12	106269345	106269559	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	2	-1.2339
chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	chr16	14129885	14131543	protein_coding	4921513D23Rik	exon	ENSMUSG00000060657	ProperStrand	47	2	-14.6712
chr8	13159389	13159405	protein_coding	Lamp1	exon	ENSMUSG00000031447	ProperStrand	92	chr18	33954821	33954919	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-2.7379
chr9	120038467	120038545	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	NonProperStrand	28	chr11	69483134	69483214	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	NonProperStrand	35	2	-20.2714
chr16	18248640	18248687	protein_coding	Ranbp1	utr5	ENSMUSG00000005732	ProperStrand	22	chr3	108357255	108357355	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-6.5115
chr4	106434699	106435060	protein_coding	Acot11	exon	ENSMUSG00000034853	ProperStrand	61	chr16	23110464	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.4335
chr11	80965641	80965658	protein_coding	Accn1	exon	ENSMUSG00000020704	NonProperStrand	228	chr19	8963031	8963082	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-1.0775
chr16	5100103	5100119	protein_coding	Ppl	exon	ENSMUSG00000039457	ProperStrand	37	chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	1	-11.5940
chr2	130268324	130268391	protein_coding	Vps16	exon	ENSMUSG00000027411	ProperStrand	25	chr8	73419657	73419706	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	5	-19.1056
chr2	172270204	172270220	protein_coding	2410001C21Rik	exon	ENSMUSG00000027502	NonProperStrand	54	chr14	47896313	47896362	protein_coding	Wdhd1	utr5	ENSMUSG00000037572	ProperStrand	35	1	-14.6156
chr14	51427129	51427229	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr2	130102055	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	10	-11.0678
chr1	173165149	173165414	protein_coding	Ndufs2	utr3	ENSMUSG00000013593	ProperStrand	32	chr15	36527855	36528019	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	2	-14.5164
chr17	32453268	32453285	protein_coding	Akap8	exon	ENSMUSG00000024045	ProperStrand	339	chr6	71832550	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	2	-4.2402
chr11	95634339	95634357	protein_coding	Zfp652	intron	ENSMUSG00000075595	NonProperStrand	8	chr11	116938563	116938663	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-10.2670
chr7	19591413	19591429	protein_coding	Irf2bp1	exon	ENSMUSG00000044030	NonProperStrand	81	chr13	51743567	51743666	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-6.2664
chr19	3487063	3490777	protein_coding	Ppp6r3	exon	ENSMUSG00000024908	ProperStrand	63	chr16	23111778	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.8263
chr9	70055465	70055481	protein_coding	Myo1e	utr5	ENSMUSG00000032220	ProperStrand	36	chr1	174427115	174427131	protein_coding	Igsf9	utr3	ENSMUSG00000037995	NonProperStrand	7	1	-18.6891
chr5	75471878	75471894	protein_coding	Gsx2	exon	ENSMUSG00000035946	ProperStrand	307	chr19	8963027	8963153	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	7	-4.8968
chr11	116112091	116112126	protein_coding	Srp68	exon	ENSMUSG00000020780	ProperStrand	42	chr7	117189868	117189929	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-6.9170
chr1	134886033	134886133	LTR	ORR1D1	MaLR	chr1ORR1D1134886048	NonProperStrand	3	chr3	123210912	123210983	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-8.0648
chr9	23211250	23211266	protein_coding	Bmper	exon	ENSMUSG00000031963	ProperStrand	16	chr9	15118244	15118343	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-9.8716
chr4	131908238	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	chr1	87983866	87983998	snoRNA	ENSMUSG00000077274_SNORA26	.	ENSMUSG00000077274	ProperStrand	361	5	-0.6961
chr3	52152669	52152759	protein_coding	Foxo1	utr3	ENSMUSG00000044167	ProperStrand	3	chr18	33954825	33954905	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-9.7168
chr8	86249827	86249903	protein_coding	Cd97	exon	ENSMUSG00000002885	ProperStrand	37	chr9	120038553	120038643	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-6.6336
chr10	77079887	77079987	protein_coding	Sumo3	utr3	ENSMUSG00000020265	ProperStrand	31	chr7	52378401	52378458	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	1	-9.8344
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr17	35299507	35299611	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-1.0611
chr2	129025618	129025708	protein_coding	Slc20a1	exon	ENSMUSG00000027397	ProperStrand	81	chr2	26494719	26494799	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.5783
chr17	27769281	27771058	protein_coding	Rps10	exon	ENSMUSG00000052146	ProperStrand	94	chr10	110918549	110918639	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-4.6326
chr10	80755767	80755784	protein_coding	Pip5k1c	utr5	ENSMUSG00000034902	NonProperStrand	6	chr5	121655016	121655127	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-8.3778
chr7	3657384	3657417	protein_coding	Rps9	exon	ENSMUSG00000006333	ProperStrand	87	chr4	131908236	131908341	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-4.4156
chr19	6134633	6134686	protein_coding	Arl2	utr3	ENSMUSG00000024944	ProperStrand	3	chr1	88247743	88247802	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-11.4044
chr9	47137785	47137875	SINE	RSINE1	B4	chr9RSINE147137759	ProperStrand	1	chr10	62302944	62303024	protein_coding	Tet1	exon	ENSMUSG00000047146	ProperStrand	286	1	-inf
chr1	181027187	181027205	protein_coding	Smyd3	intron	ENSMUSG00000055067	ProperStrand	231	chr2	154697559	154697623	protein_coding	Eif2s2	utr3	ENSMUSG00000074656	ProperStrand	96	1	-9.6667
chr5	122808939	122808983	protein_coding	Vps29	intron	ENSMUSG00000029462	ProperStrand	8	chr19	8963086	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-14.5982
chr4	8679994	8680021	protein_coding	Chd7	exon	ENSMUSG00000041235	ProperStrand	80	chr11	62418016	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-4.9977
chr16	24984504	24984520	protein_coding	Lpp	utr3	ENSMUSG00000033306	NonProperStrand	189	chr12	17552950	17553030	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	2	-5.0907
chr4	149619426	149620692	protein_coding	Eno1	exon	ENSMUSG00000063524	ProperStrand	432	chr2	26494744	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	3	-1.4940
chr2	26493422	26493512	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr12	55797768	55797848	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	1	-1.2085
chr7	138056592	138056682	protein_coding	Plekha1	utr3	ENSMUSG00000040268	ProperStrand	15	chr7	116664822	116664902	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-5.1476
chr14	44018836	44018926	LINE	L1Md_F2	L1	chr14L1Md_F244017475	NonProperStrand	1	chr8	26581498	26581588	Other	RMER1A	Other	chr8RMER1A26581431	ProperStrand	1	1	-inf
chr12	110809714	110809804	lincRNA	Meg3	exon	ENSMUSG00000021268	ProperStrand	61	chr18	33954865	33954945	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-3.4751
chr1	59539683	59539700	protein_coding	Fzd7	utr5	ENSMUSG00000041075	ProperStrand	373	chr2	26494707	26494825	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	3	-1.8428
chr4	44045384	44045462	protein_coding	Clta	utr3	ENSMUSG00000028478	ProperStrand	59	chr5	74489587	74489677	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	5	-15.8587
chr2	66048205	66055285	protein_coding	Ttc21b	exon	ENSMUSG00000034848	ProperStrand	14	chr2	26494711	26494801	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.9058
chr9	75257063	75257153	protein_coding	Mapk6	utr5	ENSMUSG00000042688	ProperStrand	25	chr1	89673646	89673726	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	6	-20.2330
chrX	71589882	71589908	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr10	110918549	110918693	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	5	-5.9615
chr19	45130139	45130227	protein_coding	Sfxn3	utr3	ENSMUSG00000025212	ProperStrand	14	chr16	43886794	43886863	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	1	-11.0303
chr13	8971479	8971574	protein_coding	Gtpbp4	utr3	ENSMUSG00000021149	ProperStrand	26	chr18	73693111	73693130	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-7.1841
chr2	89743664	89743744	LINE	Lx4B	L1	chr2Lx4B89743634	NonProperStrand	1	chr2	90538099	90538189	protein_coding	Nup160	intron	ENSMUSG00000051329	ProperStrand	49	1	-inf
chr1	88426718	88426755	protein_coding	Ptma	utr3	ENSMUSG00000026238	ProperStrand	385	chr5	122910045	122910075	protein_coding	Atp2a2	exon	ENSMUSG00000029467	ProperStrand	166	1	-7.5577
chr10	23505036	23505402	protein_coding	Rps12	exon	ENSMUSG00000061983	ProperStrand	309	chr4	116826700	116826765	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	4	-11.9354
chrX	43650682	43650703	antisense	4930515L19Rik	.	ENSMUSG00000085157	NonProperStrand	1	chr4	131865855	131865930	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chrX	98643538	98643590	protein_coding	Nono	utr3	ENSMUSG00000031311	ProperStrand	102	chr15	34370576	34370666	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	3	-6.7997
chr3	36623184	36623200	LTR	MLT1H	MaLR	chr3MLT1H36622969	ProperStrand	15	chr5	108336363	108336462	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-7.6413
chr10	44873548	44873567	protein_coding	Prep	intron	ENSMUSG00000019849	NonProperStrand	3	chr6	115758074	115758118	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-11.7922
chr2	165818154	165818171	protein_coding	Ncoa3	utr5	ENSMUSG00000027678	NonProperStrand	10	chr9	64143744	64143821	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-11.4282
chr18	85048944	85048960	protein_coding	Cyb5	exon	ENSMUSG00000024646	NonProperStrand	3	chr7	29136525	29136552	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-8.4253
chr8	125728240	125728305	protein_coding	Chmp1a	utr3	ENSMUSG00000000743	ProperStrand	4	chr5	74489545	74489635	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-9.3217
chr6	122678811	122678858	protein_coding	Slc2a3	utr3	ENSMUSG00000003153	ProperStrand	682	chr6	115542306	115542322	protein_coding	2510049J12Rik	exon	ENSMUSG00000068011	NonProperStrand	4	1	-14.1199
chr2	90853463	90853553	protein_coding	Celf1	utr3	ENSMUSG00000005506	ProperStrand	61	chr1	89681201	89681281	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-5.4086
chr10	60308003	60308093	LTR	ORR1A4	MaLR	chr10ORR1A460307994	NonProperStrand	1	chr10	60308093	60308173	LTR	ORR1A4	MaLR	chr10ORR1A460308079	NonProperStrand	1	1	-inf
chr7	29096036	29096972	protein_coding	Timm50	exon	ENSMUSG00000003438	ProperStrand	6	chr8	59934835	59934852	protein_coding	Scrg1	utr5	ENSMUSG00000031610	NonProperStrand	10	1	-19.0093
chr8	125626637	125626746	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	chr3	102861873	102861973	protein_coding	Csde1	utr3	ENSMUSG00000068823	ProperStrand	122	1	-9.1871
chr8	73996011	73996104	protein_coding	Dda1	exon	ENSMUSG00000074247	NonProperStrand	10	chr7	117189993	117190010	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-6.8419
chr3	85942723	85942779	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	chr19	8800107	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-4.1112
chr16	85795631	85795647	protein_coding	Adamts1	utr3	ENSMUSG00000022893	ProperStrand	102	chr10	40403278	40403294	protein_coding	9030224M15Rik	exon	ENSMUSG00000045555	NonProperStrand	4	1	-17.8520
chr11	49337995	49338011	protein_coding	Olfr1383	exon	ENSMUSG00000057767	ProperStrand	1	chr5	108332718	108332758	protein_coding	Rpl5	exon	ENSMUSG00000058558	ProperStrand	235	1	-inf
chr14	93575981	93575998	protein_coding	Pcdh9	intron	ENSMUSG00000055421	ProperStrand	59	chr9	15119631	15119693	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.6588
chr9	15130901	15131005	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	chr19	12086457	12086496	tRNA	tRNA109-ValTAC	.	1054580	ProperStrand	96	1	-8.2728
chr10	80644976	80645077	protein_coding	Eef2	utr3	ENSMUSG00000034994	ProperStrand	2244	chr1	91358413	91358430	protein_coding	Agap1	intron	ENSMUSG00000055013	ProperStrand	229	1	-3.5357
chr2	90235298	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	134479844	134479860	protein_coding	D4Wsu53e	exon	ENSMUSG00000037266	NonProperStrand	50	1	-4.8130
chr7	52263666	52263682	protein_coding	Scaf1	exon	ENSMUSG00000038406	ProperStrand	81	chr5	108336363	108336409	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-4.3062
chr2	26315168	26315268	protein_coding	Notch1	exon	ENSMUSG00000026923	ProperStrand	145	chr16	23110467	23110526	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.1141
chr15	4042463	4044052	protein_coding	Oxct1	exon	ENSMUSG00000022186	ProperStrand	48	chr18	33954925	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-3.9208
chr17	46690678	46690708	protein_coding	Srf	exon	ENSMUSG00000015605	ProperStrand	11	chr9	15119704	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-9.6817
chr1	182837852	182837886	protein_coding	Pycr2	utr3	ENSMUSG00000026520	ProperStrand	89	chr11	97642952	97643074	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	4	-7.1309
chr7	24713726	24713742	protein_coding	Vmn1r179	exon	ENSMUSG00000046924	NonProperStrand	69	chr18	35714219	35714263	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-3.1884
chrX	99445995	99446012	protein_coding	Cited1	utr5	ENSMUSG00000051159	ProperStrand	72	chr17	24857716	24857801	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.9975
chr9	116084304	116084320	protein_coding	Tgfbr2	utr5	ENSMUSG00000032440	NonProperStrand	17	chr15	5068407	5068434	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-8.5996
chr7	52381398	52381580	protein_coding	Rpl13a	exon	ENSMUSG00000074129	ProperStrand	269	chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	6	-16.2078
chr9	113885518	113885570	protein_coding	Ubp1	utr3	ENSMUSG00000009741	ProperStrand	29	chr11	20124986	20125079	protein_coding	Rab1	utr3	ENSMUSG00000020149	ProperStrand	32	7	-inf
chr18	3366809	3366826	lincRNA	Gm6225	exon	ENSMUSG00000091488	NonProperStrand	2	chr9	15119631	15119700	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-inf
chr19	41480766	41480846	LINE	L1_Mus1	L1	chr19L1_Mus141480692	ProperStrand	1	chr19	41479446	41479536	SINE	B1_Mur2	Alu	chr19B1_Mur241479395	NonProperStrand	1	1	-inf
chr1	102076708	102076817	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	chr7	116664819	116664924	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	4	-1.5193
chr2	145069343	145209256	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	chr18	35716736	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	13	-2.3019
chr8	125418803	125418819	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	chr6	93819539	93819607	protein_coding	Magi1	intron	ENSMUSG00000045095	ProperStrand	106	2	-13.4810
chr6	54935573	54935589	protein_coding	Ggct	utr3	ENSMUSG00000002797	ProperStrand	3	chr7	116663640	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-inf
chr6	113481725	113483769	protein_coding	Fancd2	utr5	ENSMUSG00000034023	ProperStrand	65	chr4	131865855	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.6453
chr15	77596213	77597152	protein_coding	Myh9	exon	ENSMUSG00000022443	NonProperStrand	6	chr11	88313649	88313668	protein_coding	Msi2	intron	ENSMUSG00000069769	ProperStrand	159	1	-16.0989
chr9	15119972	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	chr5	121655016	121655126	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	8	-2.7797
chr16	35932620	35932636	protein_coding	Dtx3l	exon	ENSMUSG00000049502	ProperStrand	152	chr11	97643012	97643060	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.0609
chr2	181316563	181316579	protein_coding	Uckl1	exon	ENSMUSG00000089917	ProperStrand	142	chr11	62416621	62416656	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-3.5338
chr3	52388277	52388294	SINE	B4A	B4	chr3B4A52388218	ProperStrand	169	chr4	107269405	107269424	protein_coding	Glis1	intron	ENSMUSG00000034762	NonProperStrand	8	1	-15.3669
chr1	64783398	64783777	protein_coding	Fzd5	utr5	ENSMUSG00000045005	ProperStrand	175	chr9	15119658	15119712	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-0.9996
chr6	99583139	99583156	protein_coding	Eif4e3	intron	ENSMUSG00000030068	NonProperStrand	15	chr8	113658511	113658605	protein_coding	Pdpr	exon	ENSMUSG00000033624	ProperStrand	49	1	-16.6364
chr9	45660977	45661047	protein_coding	Bace1	exon	ENSMUSG00000032086	ProperStrand	12	chr19	8799032	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	4	-20.5149
chr12	17284809	17284852	protein_coding	Pdia6	intron	ENSMUSG00000020571	ProperStrand	114	chr9	59519498	59519783	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	1	-5.9106
chr3	133130005	133130081	protein_coding	Tet2	exon	ENSMUSG00000040943	ProperStrand	192	chr6	51872316	51872333	protein_coding	Skap2	exon	ENSMUSG00000059182	NonProperStrand	34	1	-12.1273
chr3	88787051	88787067	protein_coding	Ash1l	exon	ENSMUSG00000028053	NonProperStrand	50	chr7	133940397	133940875	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	1	-8.7061
chr17	57382367	57382409	protein_coding	Gpr108	exon	ENSMUSG00000005823	ProperStrand	15	chr17	13115667	13115767	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	1	-10.3417
chr19	48871458	48871474	protein_coding	Sorcs3	intron	ENSMUSG00000063434	NonProperStrand	43	chr17	13112535	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-5.2244
chr13	59857612	59857645	protein_coding	Isca1	utr3	ENSMUSG00000044792	ProperStrand	5	chr4	131908243	131908335	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-10.1894
chr7	134705294	134706646	protein_coding	Srcap	utr3	ENSMUSG00000090663	ProperStrand	28	chr17	35089235	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-6.9955
chr18	82662186	82662202	protein_coding	Mbp	intron	ENSMUSG00000041607	NonProperStrand	185	chr7	17082886	17082930	protein_coding	Grlf1	utr3	ENSMUSG00000058230	ProperStrand	38	1	-11.9764
chr11	102962937	102962953	protein_coding	Plcd3	utr5	ENSMUSG00000020937	NonProperStrand	3	chr11	6428108	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-9.3720
chr19	43581888	43582380	protein_coding	Got1	exon	ENSMUSG00000025190	ProperStrand	32	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-4.9294
chr5	37266479	37266569	protein_coding	Ppp2r2c	intron	ENSMUSG00000029120	ProperStrand	19	chr6	71818787	71821490	protein_coding	Immt	exon	ENSMUSG00000052337	ProperStrand	48	1	-16.1004
chr4	131908816	131908895	lincRNA	Gm17300	exon	ENSMUSG00000091021	ProperStrand	109	chr18	35716761	35716861	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	NonProperStrand	45	1	-12.6943
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr3	88952697	88952713	protein_coding	Hcn3	exon	ENSMUSG00000028051	ProperStrand	40	1	-12.1888
chr6	125211830	125211847	LTR	MTEb-int	MaLR	chr6MTEb-int125211488	ProperStrand	1	chr4	131908723	131908748	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-inf
chr1	88247743	88247875	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	chr12	106269282	106269545	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	15	-1.8709
chr2	169946064	169946087	protein_coding	Zfp217	utr5	ENSMUSG00000052056	ProperStrand	79	chr4	131865936	131865971	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.3598
chr7	51502755	51502796	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	chr11	6520364	6520454	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	2	-5.4702
chr1	84790289	84790330	protein_coding	Trip12	exon	ENSMUSG00000026219	ProperStrand	248	chr11	97642952	97643080	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	7	-6.8930
chr2	122426124	122426178	protein_coding	Gatm	exon	ENSMUSG00000027199	ProperStrand	6	chr16	23111695	23111785	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-18.9947
chr11	58682475	58682491	protein_coding	2810021J22Rik	utr5	ENSMUSG00000020491	ProperStrand	162	chr9	59518516	59519407	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	1	-5.2263
chr19	41843606	41843659	protein_coding	Arhgap19	utr3	ENSMUSG00000025154	ProperStrand	34	chr2	32818889	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-6.5923
chr4	137101257	137101273	protein_coding	Hspg2	exon	ENSMUSG00000028763	ProperStrand	812	chr12	77210832	77210932	protein_coding	Syne2	exon	ENSMUSG00000063450	ProperStrand	63	1	-8.0069
chr18	35714257	35714292	lincRNA	Snhg4	intron	ENSMUSG00000090430	ProperStrand	270	chr2	155816363	155816410	protein_coding	Cep250	exon	ENSMUSG00000038241	ProperStrand	8	1	-14.4314
chr2	179289760	179289777	protein_coding	Cdh4	intron	ENSMUSG00000000305	NonProperStrand	10	chr17	35045356	35045414	protein_coding	Ehmt2	exon	ENSMUSG00000013787	ProperStrand	42	2	-20.4051
chr14	70182820	70182875	protein_coding	Tnfrsf10b	utr3	ENSMUSG00000022074	ProperStrand	57	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-7.8299
chr5	85230066	85230085	LINE	L1_Rod	L1	chr5L1_Rod85229699	ProperStrand	1	chr10	23506278	23506343	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-inf
chr8	125629016	125629082	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	chr6	122269549	122269943	protein_coding	Phc1	exon	ENSMUSG00000040669	ProperStrand	158	1	-8.6709
chr4	128436975	128436994	protein_coding	A3galt2	utr5	ENSMUSG00000028794	ProperStrand	3	chr11	55296239	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-12.5197
chr10	44225689	44225705	protein_coding	Prdm1	intron	ENSMUSG00000038151	NonProperStrand	16	chr2	91436228	91436334	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-10.1721
chr11	72008319	72008337	protein_coding	4933427D14Rik	intron	ENSMUSG00000020807	ProperStrand	13	chr3	123210861	123210883	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-4.8751
chr8	126016910	126017799	protein_coding	Afg3l1	exon	ENSMUSG00000031967	ProperStrand	29	chr10	107800765	107800845	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	1	-9.5342
chr8	106976637	106976653	protein_coding	Ccdc79	exon	ENSMUSG00000052616	NonProperStrand	57	chr16	23110828	23110882	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-0.8756
chr1	60005975	60009805	protein_coding	Fam117b	exon	ENSMUSG00000041040	ProperStrand	31	chr18	35714247	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-4.6912
chr9	115201940	115201958	protein_coding	Stt3b	intron	ENSMUSG00000032437	NonProperStrand	9	chr11	55296278	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-10.0378
chr7	54442375	54442475	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	chr8	129468745	129468810	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-1.3446
chr5	114825052	114825068	protein_coding	Kctd10	exon	ENSMUSG00000001098	NonProperStrand	1	chr16	20675424	20675527	protein_coding	Eif4g1	exon	ENSMUSG00000045983	ProperStrand	199	1	-inf
chr17	13112450	13112586	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	chr8	129468745	129468883	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	14	-0.9539
chr4	21797544	21798594	protein_coding	Sfrs18	exon	ENSMUSG00000028248	NonProperStrand	26	chr4	131866155	131866245	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-5.2680
chr7	127042890	127042979	protein_coding	Lyrm1	intron	ENSMUSG00000030922	ProperStrand	3	chrX	34622941	34623021	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-9.3485
chr12	86101802	86101831	protein_coding	Npc2	exon	ENSMUSG00000021242	ProperStrand	29	chr7	117189991	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.7044
chr12	86685245	86685262	protein_coding	Tmed10	exon	ENSMUSG00000021248	ProperStrand	34	chr9	70960077	70960093	protein_coding	Aqp9	exon	ENSMUSG00000032204	NonProperStrand	118	1	-13.1017
chr4	56910554	56910618	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	chr8	34802379	34802415	snoRNA	ENSMUSG00000088856_SNORA48	.	ENSMUSG00000088856	ProperStrand	236	1	-3.4879
chrX	71517838	71517921	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	chr16	56035871	56035961	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	1	-2.4478
chr9	21151276	21151353	protein_coding	Slc44a2	exon	ENSMUSG00000057193	ProperStrand	26	chr4	131908243	131908333	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-9.9617
chr14	25673634	25673651	DNA	MER63D	AcHobo	chr14MER63D25673510	NonProperStrand	65	chr7	20310927	20310997	protein_coding	Pvrl2	intron	ENSMUSG00000062300	ProperStrand	110	1	-11.9359
chr7	148634765	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	chr7	51505506	51505566	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	5	-4.1106
chr9	50329957	50329981	protein_coding	Pts	utr3	ENSMUSG00000032067	ProperStrand	2	chr7	50480696	50480740	protein_coding	EU599041	intron	ENSMUSG00000074887	ProperStrand	1	1	-inf
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr5	136673671	136673687	protein_coding	Prkrip1	exon	ENSMUSG00000039737	NonProperStrand	30	1	-10.1132
chr14	51427114	51427207	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr5	89101717	89101739	protein_coding	Grsf1	exon	ENSMUSG00000044221	ProperStrand	24	4	-21.5377
chr8	44385827	44385891	protein_coding	Zfp42	intron	ENSMUSG00000051176	ProperStrand	127	chr11	6428121	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-3.4722
chr11	4632102	4632139	protein_coding	Zmat5	exon	ENSMUSG00000009076	ProperStrand	9	chr5	82092444	82117544	protein_coding	Lphn3	exon	ENSMUSG00000037605	ProperStrand	19	1	-19.1915
chr8	108726155	108728234	protein_coding	Slc7a6os	exon	ENSMUSG00000033106	ProperStrand	9	chr16	23110916	23110956	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.9939
chr6	47173585	47173607	protein_coding	Cntnap2	intron	ENSMUSG00000039419	NonProperStrand	283	chr13	90238655	90238722	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	2	-9.1049
chr4	116283708	116283788	protein_coding	Nasp	exon	ENSMUSG00000028693	ProperStrand	64	chr17	24857764	24857854	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.1895
chr7	52378398	52378460	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	chr2	32818836	32818936	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-1.2560
chr1	132640340	132640357	protein_coding	AA986860	exon	ENSMUSG00000042510	NonProperStrand	8	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-7.2483
chr6	124666814	124666858	protein_coding	Phb2	utr3	ENSMUSG00000004264	ProperStrand	43	chr2	119120130	119120146	protein_coding	Vps18	exon	ENSMUSG00000034216	NonProperStrand	40	1	-14.8247
chr3	90158344	90159598	protein_coding	Gatad2b	exon	ENSMUSG00000042390	ProperStrand	21	chr4	131908729	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.9128
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	115219112	115219202	protein_coding	Stt3b	utr5	ENSMUSG00000032437	ProperStrand	66	1	-4.2811
chr7	13394104	13394152	protein_coding	Zfp329	utr3	ENSMUSG00000057894	ProperStrand	6	chr9	120038609	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-7.6033
chr7	29171541	29171558	protein_coding	Med29	utr3	ENSMUSG00000003444	NonProperStrand	134	chr17	35088966	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-4.3147
chr17	33955113	33955129	protein_coding	Kank3	exon	ENSMUSG00000042099	ProperStrand	64	chr11	62418014	62418043	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-5.4311
chr2	35690148	35690166	protein_coding	Ttll11	intron	ENSMUSG00000026885	NonProperStrand	9	chr16	23110454	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-6.0870
chr7	71032828	71032873	protein_coding	Klf13	utr3	ENSMUSG00000052040	ProperStrand	28	chr10	23505152	23505184	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.4185
chr12	70259672	70259708	protein_coding	Rps29	exon	ENSMUSG00000034892	ProperStrand	124	chr16	23111384	23111474	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-1.7451
chr11	88916765	88921278	protein_coding	Dgke	exon	ENSMUSG00000000276	ProperStrand	8	chr11	69483140	69483211	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-6.3191
chr9	44216087	44216132	protein_coding	Rps25	exon	ENSMUSG00000009927	ProperStrand	42	chr3	65762111	65762128	protein_coding	Ccnl1	utr5	ENSMUSG00000027829	ProperStrand	29	1	-15.5200
chr17	35971771	35971832	protein_coding	Tubb5	utr3	ENSMUSG00000001525	ProperStrand	624	chr12	112779242	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	2	-1.7608
chr15	58783094	58783194	protein_coding	Mtss1	exon	ENSMUSG00000022353	ProperStrand	68	chr2	130101242	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-6.3436
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr11	72263315	72263519	protein_coding	Mybbp1a	exon	ENSMUSG00000040463	ProperStrand	279	1	-5.7463
chr14	21503136	21503203	protein_coding	Sec24c	exon	ENSMUSG00000039367	ProperStrand	60	chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	5	-22.2087
chr10	5991170	5991236	protein_coding	Akap12	exon	ENSMUSG00000038587	ProperStrand	1008	chr8	90298493	90298512	protein_coding	Zfp423	intron	ENSMUSG00000045333	NonProperStrand	44	1	-8.2966
chr15	81220124	81220140	protein_coding	St13	exon	ENSMUSG00000022403	ProperStrand	59	chr6	125091171	125091221	protein_coding	Nop2	intron	ENSMUSG00000038279	ProperStrand	39	1	-14.2111
chr8	83312484	83364829	protein_coding	Gab1	exon	ENSMUSG00000031714	ProperStrand	72	chr4	131908687	131908796	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-1.9615
chr17	71564441	71564471	protein_coding	Lpin2	exon	ENSMUSG00000024052	ProperStrand	18	chr9	32065609	32065656	protein_coding	Arhgap32	intron	ENSMUSG00000041444	ProperStrand	37	2	-inf
chr15	103074205	103074448	protein_coding	Hnrnpa1	exon	ENSMUSG00000046434	ProperStrand	68	chr16	23111706	23111796	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.7080
chr2	37681910	37681944	protein_coding	Dennd1a	intron	ENSMUSG00000035392	ProperStrand	24	chr7	116664794	116664884	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-4.2269
chr6	119876009	119876089	protein_coding	Wnk1	utr3	ENSMUSG00000045962	ProperStrand	221	chr11	68886973	68887063	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-1.8529
chr16	20686362	20686381	protein_coding	Eif4g1	exon	ENSMUSG00000045983	ProperStrand	199	chr19	8800364	8800406	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-1.5112
chr8	14928924	14930087	protein_coding	Arhgef10	exon	ENSMUSG00000071176	ProperStrand	22	chr2	22444595	22444620	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-9.8003
chr4	141033920	141094197	protein_coding	Spen	exon	ENSMUSG00000040761	ProperStrand	161	chr16	23110895	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	9	-2.0567
chr7	19864420	19864486	protein_coding	Ppm1n	intron	ENSMUSG00000030402	ProperStrand	6	chr18	35102297	35102329	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	3	-18.8339
chr2	90235295	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr14	26279027	26322142	lincRNA	D930049A15Rik	exon	ENSMUSG00000087535	ProperStrand	13	1	-7.5011
chr6	148923761	148923841	Other	RMER1A	Other	chr6RMER1A148923684	NonProperStrand	1	chr6	148923599	148923689	SINE	B1_Mus2	Alu	chr6B1_Mus2148923534	ProperStrand	1	1	-inf
chr9	59274463	59284617	protein_coding	Arih1	exon	ENSMUSG00000025234	ProperStrand	75	chr15	38008368	38008386	protein_coding	Ubr5	utr5	ENSMUSG00000037487	ProperStrand	258	1	-9.9409
chr19	17230992	17231066	protein_coding	Prune2	intron	ENSMUSG00000039126	ProperStrand	49	chr8	74843500	74843590	protein_coding	Klf2	exon	ENSMUSG00000055148	ProperStrand	82	1	-13.0963
chr12	84870164	84870181	protein_coding	Dcaf4	exon	ENSMUSG00000021222	ProperStrand	17	chr18	14795926	14795943	protein_coding	Ss18	exon	ENSMUSG00000037013	ProperStrand	24	1	-17.6266
chr13	104862299	104862316	protein_coding	Nln	intron	ENSMUSG00000021710	ProperStrand	47	chr19	8963157	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.6924
chr11	74743004	74743053	protein_coding	Smg6	exon	ENSMUSG00000038290	ProperStrand	29	chr10	90581034	90581128	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	2	-10.1399
chr10	114778580	114778617	protein_coding	Tmem19	utr3	ENSMUSG00000069520	ProperStrand	24	chr11	69483180	69483270	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-6.9436
chr1	178754159	178754175	protein_coding	Sdccag8	intron	ENSMUSG00000026504	ProperStrand	54	chr2	22444796	22444817	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-7.9871
chr1	93961292	93961313	protein_coding	Hdac4	intron	ENSMUSG00000026313	NonProperStrand	15	chr11	77995191	77995239	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	2	-14.3207
chr5	112865459	112865478	protein_coding	Sez6l	exon	ENSMUSG00000058153	ProperStrand	81	chr17	35299528	35299643	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-4.2041
chr13	15569895	15569913	protein_coding	Gli3	exon	ENSMUSG00000021318	ProperStrand	54	chr1	162965530	162965554	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.4689
chr10	27892625	27892644	protein_coding	Ptprk	intron	ENSMUSG00000019889	NonProperStrand	24	chr19	8798484	8798546	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-11.3463
chr4	43505898	43505931	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr2	163706928	163706945	protein_coding	Rims4	intron	ENSMUSG00000035226	ProperStrand	7	1	-7.3054
chr8	124957522	124957627	protein_coding	Mvd	utr3	ENSMUSG00000006517	ProperStrand	13	chr10	77450679	77450726	protein_coding	Pfkl	utr3	ENSMUSG00000020277	ProperStrand	179	4	-19.2634
chr2	129033940	129034030	protein_coding	Slc20a1	exon	ENSMUSG00000027397	ProperStrand	81	chr9	120038564	120038644	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	6	-14.4433
chr4	139194381	139194457	protein_coding	Aldh4a1	exon	ENSMUSG00000028737	ProperStrand	20	chr6	145567882	145567982	protein_coding	Tuba3b	exon	ENSMUSG00000067338	ProperStrand	152	1	-13.6786
chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	chr8	87574106	87574175	snoRNA	ENSMUSG00000077527_SNORD41	.	ENSMUSG00000077527	ProperStrand	29	1	-9.1894
chr5	24753547	24753586	protein_coding	Galnt11	exon	ENSMUSG00000038072	ProperStrand	8	chr4	131908753	131908794	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-11.8763
chr17	46935999	46936104	protein_coding	BC032203	utr3	ENSMUSG00000036568	ProperStrand	64	chr16	23111451	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.1714
chr1	173217031	173217077	protein_coding	Usp21	exon	ENSMUSG00000053483	ProperStrand	3	chr16	23110828	23110915	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-5.3143
chr16	91622091	91622119	protein_coding	Gart	exon	ENSMUSG00000022962	ProperStrand	200	chr9	119536351	119539207	protein_coding	Scn10a	exon	ENSMUSG00000034533	ProperStrand	37	1	-11.8744
chr17	33961611	33966613	protein_coding	Ndufa7	exon	ENSMUSG00000041881	ProperStrand	64	chr19	8799581	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-6.6387
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr2	164732935	164732951	protein_coding	Zfp335	exon	ENSMUSG00000039834	ProperStrand	42	1	-9.4327
chr15	95484828	95484846	protein_coding	Dbx2	exon	ENSMUSG00000045608	NonProperStrand	1	chr4	131865867	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr18	31882588	31882608	protein_coding	Sap130	utr3	ENSMUSG00000024260	ProperStrand	32	chr4	131908804	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-8.2772
chr16	56016711	56016739	protein_coding	Pcnp	utr3	ENSMUSG00000071533	ProperStrand	9	chr11	97642957	97643047	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-14.4836
chr1	55137171	55137996	protein_coding	Hspd1	exon	ENSMUSG00000025980	ProperStrand	140	chr10	62228322	62228366	snoRNA	ENSMUSG00000080469_Snord98	.	ENSMUSG00000080469	ProperStrand	124	7	-19.8444
chr4	122677248	122677278	protein_coding	Mycl1	exon	ENSMUSG00000028654	ProperStrand	6	chr10	110918555	110918645	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-13.1372
chr8	64017612	64028377	protein_coding	Palld	exon	ENSMUSG00000058056	NonProperStrand	125	chr4	131865856	131865988	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	8	-10.4452
chr10	82342571	82342590	protein_coding	Txnrd1	exon	ENSMUSG00000020250	ProperStrand	47	chr15	95050371	95050387	protein_coding	Nell2	utr3	ENSMUSG00000022454	ProperStrand	64	1	-13.6788
chr2	51945742	51945768	protein_coding	Rif1	exon	ENSMUSG00000036202	ProperStrand	201	chr16	87419194	87419285	snoRNA	ENSMUSG00000065647_SNORA2	.	ENSMUSG00000065647	ProperStrand	123	6	-20.2182
chr4	144739119	144739179	protein_coding	Vps13d	exon	ENSMUSG00000020220	ProperStrand	59	chr2	79843543	79843559	protein_coding	Pde1a	intron	ENSMUSG00000059173	NonProperStrand	275	1	-10.2955
chr17	43761222	43761239	protein_coding	Tdrd6	exon	ENSMUSG00000040140	ProperStrand	1	chr1	43132316	43132332	protein_coding	Tgfbrap1	exon	ENSMUSG00000070939	ProperStrand	29	1	-inf
chr4	144900562	144900581	protein_coding	Tnfrsf8	intron	ENSMUSG00000028602	ProperStrand	7	chr12	17553030	17553071	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-9.4553
chr12	114353188	114375085	protein_coding	Mta1	utr3	ENSMUSG00000021144	NonProperStrand	11	chr16	23111372	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-7.1274
chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	chr2	125499562	125499579	protein_coding	Eid1	utr3	ENSMUSG00000091337	ProperStrand	60	1	-7.7396
chrX	93136011	93136027	protein_coding	Las1l	exon	ENSMUSG00000057421	ProperStrand	248	chr18	73693171	73693187	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-2.8631
chr2	35517015	35517031	protein_coding	Dab2ip	exon	ENSMUSG00000026883	NonProperStrand	58	chr14	103595502	103595545	protein_coding	Mycbp2	exon	ENSMUSG00000033004	ProperStrand	129	1	-11.8452
chr10	122562872	122562933	protein_coding	Usp15	exon	ENSMUSG00000020124	ProperStrand	24	chr9	120039578	120039668	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-8.3762
chr2	179322379	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr2	158185529	158185653	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-4.4496
chr5	123806580	123806599	protein_coding	Bcl7a	utr3	ENSMUSG00000029438	ProperStrand	27	chr11	62416952	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-7.6351
chr4	116136662	116136678	protein_coding	Mast2	utr5	ENSMUSG00000003810	ProperStrand	37	chr17	24857716	24857794	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	3	-8.0112
chr13	3882160	3900316	protein_coding	Net1	utr3	ENSMUSG00000021215	ProperStrand	32	chr10	23505149	23505267	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-3.9487
chr11	99091876	99091975	protein_coding	Smarce1	utr5	ENSMUSG00000037935	ProperStrand	38	chr5	130295496	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-6.1458
chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	chr12	110887828	110887848	snoRNA	ENSMUSG00000084549_SNORD113	.	ENSMUSG00000084549	ProperStrand	196	1	-7.1283
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr12	88778626	88778767	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	18	-18.8125
chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	4	-1.0006
chr1	167787555	167787572	protein_coding	Cd247	exon	ENSMUSG00000005763	ProperStrand	10	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-5.0395
chr17	34165872	34165972	protein_coding	Slc39a7	exon	ENSMUSG00000024327	ProperStrand	39	chr10	23505152	23505193	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.8710
chr8	8661015	8661048	protein_coding	Efnb2	utr5	ENSMUSG00000001300	ProperStrand	9	chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	1	-13.4670
chr9	64022789	64023067	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	chr6	85395120	85395210	protein_coding	Smyd5	exon	ENSMUSG00000033706	ProperStrand	107	39	-inf
chr12	106006850	106008667	protein_coding	Clmn	utr3	ENSMUSG00000021097	ProperStrand	50	chr4	131865857	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-7.8480
chr11	35380172	35380189	protein_coding	Slit3	intron	ENSMUSG00000056427	ProperStrand	61	chr11	6428054	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.1624
chr11	94924454	94924503	protein_coding	Itga3	exon	ENSMUSG00000001507	ProperStrand	21	chr18	38611972	38612000	protein_coding	Ndfip1	exon	ENSMUSG00000024425	ProperStrand	42	2	-19.4037
chr2	90235292	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	35180588	35180604	protein_coding	Nup205	exon	ENSMUSG00000038759	ProperStrand	56	2	-7.6340
chr7	50906811	50906855	protein_coding	Siglece	utr3	ENSMUSG00000030474	ProperStrand	1	chr19	8800453	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-inf
chr11	94530109	94530758	protein_coding	Xylt2	exon	ENSMUSG00000020868	ProperStrand	65	chr2	26494811	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.9637
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr7	29690516	29690533	protein_coding	Actn4	intron	ENSMUSG00000054808	NonProperStrand	14	1	-11.5511
chr1	98777484	98777500	lincRNA	Gm5101	exon	ENSMUSG00000092052	ProperStrand	1	chr17	24857716	24857794	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-inf
chr8	25585556	25585573	LINE	Lx	L1	chr8Lx25585401	ProperStrand	6	chr15	36535530	36535560	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	1	-12.6356
chr5	142505665	142505681	protein_coding	Sdk1	intron	ENSMUSG00000039683	NonProperStrand	21	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-7.9401
chr8	77633645	77633688	protein_coding	Mcm5	exon	ENSMUSG00000005410	ProperStrand	199	chr7	117190016	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	2	-2.5688
chr9	21471742	21471806	protein_coding	Smarca4	exon	ENSMUSG00000032187	ProperStrand	196	chr7	138459653	138459669	protein_coding	Cuzd1	exon	ENSMUSG00000040205	NonProperStrand	59	1	-10.9726
chr15	73410856	73416633	protein_coding	Slc45a4	intron	ENSMUSG00000079020	ProperStrand	127	chr17	35089182	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	3	-9.8111
chr11	12137829	12137957	protein_coding	Cobl	utr3	ENSMUSG00000020173	ProperStrand	133	chrX	20096687	20096703	protein_coding	Phf16	utr3	ENSMUSG00000037315	NonProperStrand	8	1	-15.8314
chr17	29628221	29628239	protein_coding	Pim1	intron	ENSMUSG00000024014	ProperStrand	13	chr18	35714162	35714253	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-6.4211
chr4	147385125	147385141	protein_coding	Clcn6	exon	ENSMUSG00000029016	ProperStrand	120	chr9	15119967	15120010	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-5.8838
chr6	29316078	29316115	protein_coding	Calu	utr5	ENSMUSG00000029767	ProperStrand	47	chr7	109149271	109149287	protein_coding	Numa1	exon	ENSMUSG00000066306	NonProperStrand	171	1	-11.7042
chr4	95290193	95290209	protein_coding	Fggy	exon	ENSMUSG00000028573	ProperStrand	44	chr2	144087414	144087462	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-7.1623
chr2	144091715	144091815	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	ProperStrand	549	chr17	35089181	35089247	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-1.5360
chr11	96771304	96772031	protein_coding	Cdk5rap3	exon	ENSMUSG00000018669	ProperStrand	16	chr19	8799063	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-8.4852
chr10	119817321	119817369	lincRNA	1700006J14Rik	intron	ENSMUSG00000034764	ProperStrand	12	chrX	12867306	12867336	protein_coding	Ddx3x	exon	ENSMUSG00000000787	ProperStrand	67	1	-16.3203
chr7	149170855	149171340	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	chr15	79908956	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-3.5152
chr3	142516495	142516585	protein_coding	Pkn2	exon	ENSMUSG00000004591	ProperStrand	28	chr11	69483150	69483279	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-6.4863
chr2	23048612	23048640	protein_coding	Yme1l1	exon	ENSMUSG00000026775	ProperStrand	20	chr4	131908393	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.2521
chr1	135284186	135284203	protein_coding	Sox13	intron	ENSMUSG00000070643	NonProperStrand	12	chr4	131865381	131865408	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-7.1824
mmu-miR-6240	1	26	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr9	39358287	39358304	protein_coding	Olfr958	exon	ENSMUSG00000050853	NonProperStrand	266	1	-3.0840
chr11	120148960	120148976	protein_coding	Bahcc1	exon	ENSMUSG00000039741	NonProperStrand	268	chr13	23646940	23647005	protein_coding	Hist1h1d	utr5	ENSMUSG00000052565	ProperStrand	78	1	-9.7861
chr10	109988872	109988889	LTR	RMER13A	ERVK	chr10RMER13A109988484	ProperStrand	15	chr2	26494711	26494760	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.7664
chr1	63225679	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	chr2	144087383	144087447	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	2	-1.6037
chr3	52388277	52388294	SINE	B4A	B4	chr3B4A52388218	ProperStrand	169	chr11	68886971	68887038	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-2.2863
chr11	50069599	50069675	protein_coding	Maml1	utr3	ENSMUSG00000050567	ProperStrand	29	chr5	74489596	74489639	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	7	-inf
chr15	102176954	102177188	protein_coding	Aaas	exon	ENSMUSG00000036678	ProperStrand	10	chr16	23111394	23111474	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.3721
chr15	100014869	100014886	protein_coding	Dip2b	intron	ENSMUSG00000023026	ProperStrand	48	chr5	50393256	50398001	protein_coding	Gpr125	exon	ENSMUSG00000029090	NonProperStrand	25	1	-15.5172
chr5	130295804	130295838	protein_coding	Cct6a	exon	ENSMUSG00000029447	ProperStrand	128	chr7	116664823	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.3525
chr9	53033636	53033726	protein_coding	Ddx10	exon	ENSMUSG00000053289	ProperStrand	40	chr7	118219582	118219662	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-4.9486
chr13	12342142	12342900	protein_coding	Mtr	exon	ENSMUSG00000021311	ProperStrand	22	chr7	29136529	29136619	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-10.2624
chr7	134671389	134671504	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	chr19	8798738	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	2	-1.0841
chr8	59992128	59992925	protein_coding	Hmgb2	exon	ENSMUSG00000054717	ProperStrand	184	chr4	131865865	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	6	-4.7640
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chrX	84483697	84483750	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	3	-6.0656
chr18	78017511	78017591	protein_coding	Atp5a1	exon	ENSMUSG00000025428	ProperStrand	254	chr8	131248138	131248228	protein_coding	Itgb1	exon	ENSMUSG00000025809	ProperStrand	35	1	-11.5085
chr10	94559172	94559262	LTR	MTC-int	MaLR	chr10MTC-int94558609	ProperStrand	2	chr10	94559404	94559494	LTR	MTC	MaLR	chr10MTC94559240	ProperStrand	1	1	-inf
chr3	102861883	102861973	protein_coding	Csde1	utr3	ENSMUSG00000068823	ProperStrand	122	chr10	39978320	39978400	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-4.0969
chr1	119332303	119332393	LTR	RMER3D-int	ERVK	chr1RMER3D-int119331863	ProperStrand	1	chr1	121489804	121489884	protein_coding	Epb4.1l5	intron	ENSMUSG00000026383	ProperStrand	22	1	-inf
chr11	3426352	3426368	protein_coding	Smtn	exon	ENSMUSG00000020439	ProperStrand	222	chr10	126627929	126627983	protein_coding	Dtx3	utr3	ENSMUSG00000040415	ProperStrand	5	1	-15.8260
chr1	93743979	93743995	protein_coding	Twist2	utr3	ENSMUSG00000007805	ProperStrand	21	chr4	131908689	131908783	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.9128
chr4	126421613	126421672	protein_coding	Ncdn	utr3	ENSMUSG00000028833	ProperStrand	35	chr1	192712615	192712631	protein_coding	Rps6kc1	exon	ENSMUSG00000089872	ProperStrand	241	1	-11.6135
chr1	164608331	164609664	protein_coding	Prrc2c	exon	ENSMUSG00000040225	ProperStrand	413	chr1	158585520	158585569	protein_coding	Tor3a	utr3	ENSMUSG00000060519	ProperStrand	30	1	-10.8491
chr2	168009172	168009217	protein_coding	Adnp	exon	ENSMUSG00000051149	ProperStrand	48	chr1	89673627	89673717	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-3.6737
chr10	39393966	39393991	lincRNA	E130307A14Rik	intron	ENSMUSG00000087177	ProperStrand	14	chr7	116663634	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-12.5385
chr3	96363740	96365450	protein_coding	Txnip	utr3	ENSMUSG00000038393	ProperStrand	172	chr10	23505149	23505266	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	7	-4.3583
chr7	117166722	117166850	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	chr8	98269959	98270049	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	7	-1.0434
chr11	55296235	55296262	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	chr19	44188520	44188610	snoRNA	ENSMUSG00000077391_SNORA12	.	ENSMUSG00000077391	ProperStrand	506	1	-2.2205
chr1	74470436	74470453	protein_coding	Vil1	exon	ENSMUSG00000026175	ProperStrand	68	chr4	131908356	131908410	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.2431
chr13	99709860	99709950	LTR	RLTR14	ERV1	chr13RLTR1499709886	NonProperStrand	1	chr13	99709526	99709616	SINE	B2_Mm2	B2	chr13B2_Mm299709467	NonProperStrand	1	1	-inf
chr15	82167893	82167910	protein_coding	Naga	exon	ENSMUSG00000022453	ProperStrand	5	chr7	138667277	138667294	protein_coding	Fgfr2	intron	ENSMUSG00000030849	ProperStrand	100	1	-17.4839
chr2	83643056	83643146	protein_coding	Itgav	exon	ENSMUSG00000027087	ProperStrand	59	chr1	89673687	89673767	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-3.2939
chr4	130125743	130125774	protein_coding	Nkain1	utr5	ENSMUSG00000078532	ProperStrand	45	chr7	29136536	29136654	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-4.9855
chr7	106628496	106628546	protein_coding	Rps3	exon	ENSMUSG00000030744	ProperStrand	159	chr7	116663683	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	7	-10.0510
chr7	104856385	104856485	protein_coding	Clns1a	intron	ENSMUSG00000025439	ProperStrand	16	chr16	23110546	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.9207
chr5	118376503	118376519	protein_coding	Nos1	exon	ENSMUSG00000029361	NonProperStrand	237	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-2.1074
chr6	94776847	94776872	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	chr4	122970392	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	2	-5.7242
chr18	36885433	36885449	protein_coding	Cd14	exon	ENSMUSG00000051439	ProperStrand	65	chr5	151755616	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-7.5798
chr11	48616656	48616706	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	chr9	64023229	64023273	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	1	-4.5556
chr11	69480628	69480649	protein_coding	Eif4a1	utr3	ENSMUSG00000059796	ProperStrand	108	chr1	39605591	39605650	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-6.1802
chr9	99006029	99006045	protein_coding	Pik3cb	exon	ENSMUSG00000032462	NonProperStrand	3	chr8	73115801	73115837	protein_coding	Ell	utr3	ENSMUSG00000070002	ProperStrand	32	1	-23.9570
chr2	30751605	30751623	protein_coding	Ptges	intron	ENSMUSG00000050737	NonProperStrand	10	chr19	8799022	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-9.4608
chr11	68715882	68716687	protein_coding	Rpl26	exon	ENSMUSG00000060938	ProperStrand	130	chr5	111121066	111121097	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	3	-11.6053
chrX	67458741	67458757	LINE	Lx8	L1	chrXLx867458264	NonProperStrand	35	chr16	23110913	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.8578
chr3	137849424	137849440	protein_coding	4930579F01Rik	utr5	ENSMUSG00000012042	NonProperStrand	156	chr9	15121008	15121034	snoRNA	ENSMUSG00000065265_SNORA32	.	ENSMUSG00000065265	ProperStrand	101	1	-10.3496
chr19	10284899	10284918	protein_coding	Gm98	exon	ENSMUSG00000036098	ProperStrand	26	chr17	35299510	35299610	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-6.4209
chr2	153594146	153594236	protein_coding	Mapre1	utr3	ENSMUSG00000027479	ProperStrand	19	chr16	23110905	23110985	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7016
chr6	134666115	134666205	protein_coding	Dusp16	utr3	ENSMUSG00000030203	ProperStrand	27	chr16	23110911	23110991	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.1875
chr2	26493499	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	NonProperStrand	10	chr2	26493366	26493486	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	NonProperStrand	10	1	-20.3924
chr1	134229192	134229292	protein_coding	Nuak2	utr3	ENSMUSG00000009772	ProperStrand	11	chr3	123210854	123210923	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.2109
chr7	75097803	75097820	protein_coding	Igf1r	exon	ENSMUSG00000005533	ProperStrand	121	chr17	24857740	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	6	-9.0485
chr1	133141328	133141344	protein_coding	Rassf5	exon	ENSMUSG00000026430	ProperStrand	73	chr12	17552961	17553032	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-4.7106
chr1	162968240	162968288	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	NonProperStrand	2	chr2	26768049	26768082	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	NonProperStrand	4	1	-inf
chr12	77389871	77408239	protein_coding	Mthfd1	exon	ENSMUSG00000021048	ProperStrand	71	chr4	131865855	131865951	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-2.8378
chr11	48619121	48619520	protein_coding	Gnb2l1	exon	ENSMUSG00000020372	ProperStrand	347	chr15	98428803	98428820	protein_coding	Adcy6	exon	ENSMUSG00000022994	ProperStrand	50	3	-19.1505
chr2	130101996	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	chr11	51551334	51551424	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	4	-3.5686
chr4	131908258	131908358	lincRNA	Gm17300	exon	ENSMUSG00000091021	ProperStrand	109	chr11	69481433	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	NonProperStrand	24	1	-13.9684
chr19	5801915	5802010	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr2	157119950	157120991	protein_coding	Rpn2	exon	ENSMUSG00000027642	ProperStrand	363	1	-4.0408
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr8	74446729	74446745	protein_coding	Zfp617	intron	ENSMUSG00000066880	NonProperStrand	208	1	-6.4553
chr6	98591290	98591307	SINE	B1_Mus2	Alu	chr6B1_Mus298591183	NonProperStrand	1	chr11	106362326	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-inf
chr1	132639190	132639207	protein_coding	AA986860	exon	ENSMUSG00000042510	ProperStrand	15	chr3	123210876	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-4.5915
chr2	90235315	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	53003875	53003891	protein_coding	Prpf40a	exon	ENSMUSG00000061136	ProperStrand	129	1	-3.0438
chr13	46862951	46862994	snoRNA	ENSMUSG00000064558_SNORA55	.	ENSMUSG00000064558	ProperStrand	187	chr15	34370545	34370595	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-1.6187
chr14	47551362	47551382	protein_coding	Samd4	intron	ENSMUSG00000021838	NonProperStrand	4	chr8	26629405	26629479	protein_coding	Fgfr1	utr5	ENSMUSG00000091895	ProperStrand	16	1	-21.9369
chr15	78354084	78354100	protein_coding	C1qtnf6	utr3	ENSMUSG00000022440	ProperStrand	1	chr7	30066591	30066622	protein_coding	Spint2	exon	ENSMUSG00000074227	ProperStrand	82	1	-inf
chr2	164651116	164651239	protein_coding	Zswim1	exon	ENSMUSG00000017764	ProperStrand	68	chr8	86535304	86535320	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	1	-11.1825
chr17	34747537	34747555	protein_coding	Agpat1	exon	ENSMUSG00000034254	NonProperStrand	39	chr18	75161533	75161577	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-8.0646
chr16	23111373	23111415	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	chr4	74926527	74926571	snoRNA	ENSMUSG00000065884_SNORA63	.	ENSMUSG00000065884	ProperStrand	12	1	-4.0123
chr11	120208313	120208348	protein_coding	Actg1	exon	ENSMUSG00000062825	ProperStrand	178	chr11	77996558	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-3.9958
chr6	91707211	91707311	protein_coding	Slc6a6	utr3	ENSMUSG00000030096	ProperStrand	206	chr18	33954924	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	17	-20.4629
chr10	29920300	29920317	protein_coding	Cenpw	utr5	ENSMUSG00000075266	ProperStrand	3	chr19	8798516	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-11.5227
chr17	42933144	42933173	protein_coding	Cd2ap	utr3	ENSMUSG00000061665	ProperStrand	44	chr16	23110454	23110521	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.0046
chr9	110282242	110282258	protein_coding	Scap	exon	ENSMUSG00000032485	ProperStrand	37	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-9.8999
chr8	98441075	98441165	SINE	B1_Mur2	Alu	chr8B1_Mur298441048	NonProperStrand	1	chr8	98440958	98441048	SINE	B2_Mm1a	B2	chr8B2_Mm1a98440841	NonProperStrand	1	1	-inf
chr19	8799830	8799867	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	chr7	67123728	67123757	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	1	-1.6106
chr18	38050708	38094879	protein_coding	Diap1	exon	ENSMUSG00000024456	ProperStrand	77	chr16	23111387	23111499	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-3.0607
chr7	87363816	87363875	protein_coding	Sema4b	exon	ENSMUSG00000030539	ProperStrand	54	chr5	121655040	121655130	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.9447
chr4	98609379	98611338	protein_coding	Dock7	exon	ENSMUSG00000028556	NonProperStrand	5	chr7	70589886	70589904	protein_coding	Otud7a	intron	ENSMUSG00000033510	NonProperStrand	9	1	-18.9379
chr7	50554810	50554900	protein_coding	Zfp715	exon	ENSMUSG00000012640	ProperStrand	10	chr12	106269362	106269511	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	10	-inf
chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	chr7	25775398	25775419	protein_coding	Atp1a3	exon	ENSMUSG00000040907	ProperStrand	66	1	-8.3134
chr17	66199532	66201556	protein_coding	Ralbp1	exon	ENSMUSG00000024096	ProperStrand	39	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.0833
chr2	129004103	129004121	antisense	AI847159	.	ENSMUSG00000084826	NonProperStrand	63	chr16	23110828	23110960	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-0.7310
chr19	44188368	44188463	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr11	58889821	58889837	protein_coding	Obscn	exon	ENSMUSG00000061462	ProperStrand	81	1	-7.1974
chr2	32818767	32818886	protein_coding-noncoding	Rpl12	utr5	ENSMUSG00000038900	ProperStrand	68	chr13	22127002	22127020	protein_coding	Hist1h2ah	utr3	ENSMUSG00000069302	ProperStrand	12	1	-16.3298
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr16	30514154	30514171	protein_coding	Tmem44	utr3	ENSMUSG00000022537	ProperStrand	217	2	-3.8486
chr13	93264991	93265033	protein_coding	Zfyve16	exon	ENSMUSG00000021706	ProperStrand	14	chr7	150717297	150717350	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-8.4270
chr5	121864502	121864568	protein_coding	Naa25	exon	ENSMUSG00000042719	ProperStrand	95	chr9	120039623	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.5059
chr4	41670114	41670163	protein_coding	Dctn3	utr5	ENSMUSG00000028447	ProperStrand	4	chr7	52382753	52382826	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	2	-19.4246
chr1	121458185	121458202	protein_coding	Epb4.1l5	intron	ENSMUSG00000026383	NonProperStrand	28	chr19	37978256	37978335	protein_coding	Myof	exon	ENSMUSG00000048612	ProperStrand	37	1	-15.8177
chr6	86326552	86328755	protein_coding	Snrpg	exon	ENSMUSG00000057278	ProperStrand	12	chr16	23110911	23110991	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.4686
chr11	58682398	58682415	protein_coding	2810021J22Rik	utr5	ENSMUSG00000020491	ProperStrand	162	chr9	59401945	59401981	protein_coding	Hexa	exon	ENSMUSG00000025232	ProperStrand	12	1	-14.6070
chrX	7476503	7476526	protein_coding	Timm17b	utr5	ENSMUSG00000031158	NonProperStrand	1	chr9	30235085	30235102	protein_coding	Snx19	exon	ENSMUSG00000031993	ProperStrand	353	1	-inf
chr16	36886302	36887328	antisense	4930565N06Rik	.	ENSMUSG00000084834	ProperStrand	27	chr11	53590316	53590416	protein_coding	Irf1	utr3	ENSMUSG00000018899	ProperStrand	17	1	-17.4194
chr14	108993355	108993374	LINE	Lx	L1	chr14Lx108993236	ProperStrand	1	chr10	90581256	90581282	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-inf
chr4	53015201	53015217	SINE	B1F1	Alu	chr4B1F153015138	ProperStrand	102	chr6	71832659	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-4.5838
chr6	129303445	129303461	protein_coding	Clec12a	exon	ENSMUSG00000053063	ProperStrand	1	chr11	68853906	68853960	tRNA	tRNA396-ProCGG	.	1727937	ProperStrand	48	1	-inf
chr1	173933453	173933498	protein_coding	Vangl2	utr3	ENSMUSG00000026556	ProperStrand	37	chr16	23110454	23110508	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.3186
chrX	84483702	84483736	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr11	58768266	58768347	protein_coding	Hist3h2a	exon	ENSMUSG00000078851	ProperStrand	67	3	-17.7252
chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	chr3	108357255	108357350	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	3	-3.9770
chr12	72233661	72233717	protein_coding	Timm9	intron	ENSMUSG00000021079	ProperStrand	3	chrX	53985018	53985034	protein_coding	Fhl1	utr5	ENSMUSG00000023092	NonProperStrand	4	1	-inf
chr17	24665420	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	chrX	143918834	143918924	snoRNA	ENSMUSG00000084421_SNORA35	.	ENSMUSG00000084421	ProperStrand	293	5	-10.0811
chr10	11010026	11010043	protein_coding	Fbxo30	exon	ENSMUSG00000047648	ProperStrand	7	chr14	76247741	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-8.4963
chr4	136109368	136109391	protein_coding-noncoding	Kdm1a	utr3	ENSMUSG00000036940	ProperStrand	2	chr16	23111771	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-inf
chr4	106863283	106865077	protein_coding	Tmem59	exon	ENSMUSG00000028618	ProperStrand	29	chr11	69483190	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-6.3832
chr15	76174110	76174770	protein_coding	Cyc1	exon	ENSMUSG00000022551	ProperStrand	47	chr4	76614453	76614470	protein_coding	Ptprd	intron	ENSMUSG00000028399	ProperStrand	198	1	-11.4111
chr19	6374067	6374877	protein_coding	Sf1	exon	ENSMUSG00000024949	ProperStrand	251	chr9	15119702	15119970	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-1.2709
chr1	88426649	88426737	protein_coding	Ptma	utr3	ENSMUSG00000026238	ProperStrand	385	chr3	97817679	97851652	protein_coding	Notch2	exon	ENSMUSG00000027878	ProperStrand	86	2	-14.0741
chr10	126501475	126501693	protein_coding	Cdk4	exon	ENSMUSG00000006728	ProperStrand	47	chr11	69483136	69483186	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.8745
chr1	155309693	155309785	protein_coding	Dhx9	exon	ENSMUSG00000042699	ProperStrand	98	chr9	15119987	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-6.2814
chr4	149620850	149621623	protein_coding	Eno1	exon	ENSMUSG00000063524	ProperStrand	432	chr3	68889044	68889124	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	5	-3.6619
chr18	10052131	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr3	36623184	36623200	LTR	MLT1H	MaLR	chr3MLT1H36622969	ProperStrand	15	1	-11.6168
chr1	162966189	162966269	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	chr3	95980360	95980411	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	2	-2.9628
chrX	163645217	163645293	protein_coding	Tmsb4x	utr3	ENSMUSG00000049775	ProperStrand	11	chr16	23110533	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.6740
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	30231465	30231510	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	2	-1.6522
chr14	30123206	30123228	protein_coding	Cacna2d3	intron	ENSMUSG00000021991	NonProperStrand	26	chr4	131908714	131908804	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.5345
chr6	94776857	94776875	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	chr9	15118256	15118322	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-0.9353
chr7	107886929	107887038	protein_coding	Fam168a	intron	ENSMUSG00000029461	ProperStrand	14	chr18	35714262	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-6.2700
chr2	37207267	37207466	protein_coding	Pdcl	utr3	ENSMUSG00000009030	ProperStrand	32	chr4	131908687	131908808	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	8	-19.2630
chr2	20571346	20571367	protein_coding	Etl4	intron	ENSMUSG00000036617	ProperStrand	86	chr9	15119967	15120036	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	3	-14.9028
chr10	75952319	75952626	protein_coding	Mcm3ap	exon	ENSMUSG00000001150	ProperStrand	95	chr17	27957280	27957296	protein_coding	D17Wsu92e	utr5	ENSMUSG00000056692	NonProperStrand	11	1	-15.8469
chr8	125778429	125778445	protein_coding	Zfp276	utr5	ENSMUSG00000001065	NonProperStrand	6	chr11	6428088	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-12.7157
chr10	78989732	78989832	protein_coding	Ppap2c	utr3	ENSMUSG00000052151	ProperStrand	2	chr4	131865931	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-8.7800
chr2	51965892	51965966	protein_coding	Rif1	exon	ENSMUSG00000036202	ProperStrand	201	chr11	69481341	69481431	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-1.2411
chr14	35124100	35124154	protein_coding	Glud1	exon	ENSMUSG00000021794	ProperStrand	72	chr9	120037927	120038027	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-4.3571
chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-6.4988
chr6	28375745	28375825	protein_coding	Arf5	exon	ENSMUSG00000020440	ProperStrand	19	chr4	131865878	131865968	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-12.7344
chr9	37192069	37192086	protein_coding	Hepacam	intron	ENSMUSG00000046240	NonProperStrand	29	chr11	97643007	97643061	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.7822
chr13	10453248	10453265	lincRNA	Gm16950	intron	ENSMUSG00000086178	ProperStrand	8	chr11	106362639	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-11.5300
chr13	23392049	23392066	lincRNA	4930557F10Rik	intron	ENSMUSG00000085488	NonProperStrand	51	chr9	15118245	15118305	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-6.3753
chr9	64024761	64024830	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	chr17	24665420	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	8	-11.8222
chr8	73286753	73286816	protein_coding	Ifi30	utr3	ENSMUSG00000031838	ProperStrand	40	chr9	15119646	15119736	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.3539
chr13	51743579	51743661	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	chr17	35384120	35384195	snoRNA	ENSMUSG00000065273_SNORD83	.	ENSMUSG00000065273	ProperStrand	244	2	-6.9170
chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	chr2	156764362	156766117	protein_coding	Ndrg3	exon	ENSMUSG00000027634	ProperStrand	16	1	-12.2649
chr17	12891082	12891182	protein_coding	Igf2r	exon	ENSMUSG00000023830	ProperStrand	151	chr5	108333576	108333643	snoRNA	ENSMUSG00000064453_Snord21	.	ENSMUSG00000064453	ProperStrand	201	1	-9.0387
chr12	34642676	34642692	protein_coding	Twist1	utr5	ENSMUSG00000035799	ProperStrand	3	chr6	125136478	125136568	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	NonProperStrand	10	1	-inf
chr1	173171106	173171145	protein_coding	Ndufs2	exon	ENSMUSG00000013593	ProperStrand	32	chr1	162967514	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.6627
chr9	102175210	102175300	protein_coding	Ephb1	intron	ENSMUSG00000032537	ProperStrand	13	chr3	85004333	85004423	protein_coding	Arfip1	intron	ENSMUSG00000074513	NonProperStrand	56	1	-16.5656
chr17	50424098	50424126	protein_coding	Dazl	intron	ENSMUSG00000010592	ProperStrand	10	chr15	71624757	71624799	snoRNA	ENSMUSG00000088895_SNORA81	.	ENSMUSG00000088895	ProperStrand	348	1	-13.4559
chr6	3794656	3794674	SINE	B4A	B4	chr6B4A3794525	NonProperStrand	26	chr4	131866228	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-5.2680
chr1	97484534	97484551	protein_coding	St8sia4	utr3	ENSMUSG00000040710	NonProperStrand	2	chr10	62271426	62271509	protein_coding	Tet1	utr3	ENSMUSG00000047146	ProperStrand	286	1	-17.8029
chr9	44195407	44195781	protein_coding	Hyou1	exon	ENSMUSG00000032115	ProperStrand	145	chr11	106362568	106362635	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-5.6632
chr5	35251503	35251603	protein_coding	Htt	utr3	ENSMUSG00000029104	ProperStrand	73	chr12	44844111	44844156	snoRNA	ENSMUSG00000065004_SNORA33	.	ENSMUSG00000065004	ProperStrand	111	1	-11.6834
chr18	15991759	15991849	protein_coding	Gm10036	utr3	ENSMUSG00000058064	ProperStrand	3	chr4	135606285	135607145	protein_coding	Rpl11	exon	ENSMUSG00000059291	ProperStrand	152	3	-inf
chr19	8800386	8800466	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	chr6	125071781	125071871	snoRNA	ENSMUSG00000088208_SCARNA11	.	ENSMUSG00000088208	ProperStrand	113	1	-2.4077
chr4	21737944	21737961	protein_coding	Usp45	exon	ENSMUSG00000040455	ProperStrand	40	chr10	110918559	110918634	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-4.2075
chr12	52472722	52473417	protein_coding	G2e3	exon	ENSMUSG00000035293	ProperStrand	53	chr11	62416575	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-5.4081
chr11	96712036	96714754	protein_coding	Copz2	exon	ENSMUSG00000018672	ProperStrand	11	chr13	90238585	90238692	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	2	-18.6537
chr7	112892494	112892657	protein_coding	Taf10	exon	ENSMUSG00000043866	ProperStrand	14	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-9.9284
chr11	116405188	116405293	protein_coding	Ube2o	exon	ENSMUSG00000020802	ProperStrand	134	chr7	52382241	52382289	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-6.6859
chr4	131908357	131908464	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr11	82692475	82692491	protein_coding	Rad51l3	exon	ENSMUSG00000018841	ProperStrand	112	1	-6.0253
chr7	108440949	108440967	protein_coding	Atg16l2	intron	ENSMUSG00000047767	ProperStrand	121	chr1	162965539	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.0642
chr11	4820972	4820990	protein_coding	Thoc5	intron	ENSMUSG00000034274	ProperStrand	325	chr17	47456502	47456537	protein_coding	Trerf1	exon	ENSMUSG00000064043	ProperStrand	56	1	-10.0667
chr5	151183504	151184279	protein_coding	Fry	utr5	ENSMUSG00000056602	ProperStrand	24	chr14	76247753	76247836	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-5.9558
chr7	111302810	111302826	protein_coding	E030002O03Rik	exon	ENSMUSG00000044265	NonProperStrand	5	chr8	26308706	26308738	protein_coding	Tacc1	intron	ENSMUSG00000065954	ProperStrand	12	1	-19.5840
chr11	82256916	82256932	protein_coding	Tmem132e	exon	ENSMUSG00000020701	ProperStrand	21	chr19	36932437	36932468	protein_coding	Tnks2	exon	ENSMUSG00000024811	ProperStrand	133	1	-13.8430
chr9	64024547	64024567	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	chr14	33005139	33005210	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	3	-1.4582
chr4	137071263	137071353	protein_coding	Hspg2	exon	ENSMUSG00000028763	NonProperStrand	18	chr9	120037900	120037980	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	NonProperStrand	19	2	-20.2957
chr2	162908977	162908993	protein_coding	Mybl2	exon	ENSMUSG00000017861	NonProperStrand	9	chr8	113565540	113566159	protein_coding	Aars	exon	ENSMUSG00000031960	ProperStrand	355	1	-13.6410
chr15	4853797	4853813	protein_coding	Heatr7b2	intron	ENSMUSG00000022155	ProperStrand	2	chr5	136608942	136609183	protein_coding	Lrwd1	exon	ENSMUSG00000029703	ProperStrand	27	1	-21.0126
chr11	102294590	102294607	protein_coding	Grn	exon	ENSMUSG00000034708	ProperStrand	43	chr13	44964941	44964982	protein_coding	Jarid2	intron	ENSMUSG00000038518	ProperStrand	372	1	-10.3294
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	173341933	173341949	protein_coding	Usf1	utr5	ENSMUSG00000026641	NonProperStrand	144	2	-4.9423
chrX	148139541	148139557	LINE	Lx9	L1	chrXLx9148139162	NonProperStrand	4	chr16	23111361	23111429	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	1	-14.6851
chr2	38280204	38280224	lincRNA	Gm13589	intron	ENSMUSG00000085950	NonProperStrand	31	chr2	61892317	61892334	protein_coding	Slc4a10	intron	ENSMUSG00000026904	ProperStrand	40	1	-15.4619
chr13	49180816	49180832	protein_coding	Wnk2	exon	ENSMUSG00000037989	ProperStrand	20	chr5	151755616	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-9.9579
chr9	64025166	64025231	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	chr19	8800461	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	3	-1.2579
chr19	6914842	6914871	protein_coding	Rps6ka4	exon	ENSMUSG00000024952	ProperStrand	3	chr18	6975141	6975159	protein_coding	Mkx	intron	ENSMUSG00000061013	NonProperStrand	2	1	-inf
chr2	91436312	91436336	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	chr3	88497862	88497980	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-2.0104
chr17	36002147	36002253	protein_coding	Nrm	utr3	ENSMUSG00000059791	ProperStrand	253	chr19	8799856	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-2.3170
chr3	120861729	120861761	protein_coding	Rwdd3	exon	ENSMUSG00000028133	ProperStrand	3	chr11	97642950	97643062	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-8.5513
chr9	21637355	21637371	protein_coding	Dock6	exon	ENSMUSG00000032198	ProperStrand	155	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-3.4056
chr6	51416949	51416975	protein_coding	Hnrnpa2b1	exon	ENSMUSG00000004980	ProperStrand	166	chr4	131908685	131908795	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-1.0486
chr11	35380172	35380189	protein_coding	Slit3	intron	ENSMUSG00000056427	ProperStrand	61	chr4	131908752	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.2013
chr17	12876939	12893255	protein_coding	Igf2r	exon	ENSMUSG00000023830	ProperStrand	151	chr4	131865856	131865966	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	5	-4.4381
chr17	14333272	14333341	protein_coding	Dact2	exon	ENSMUSG00000048826	ProperStrand	8	chr4	131908810	131908896	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-11.8763
chr3	87541571	87541671	protein_coding	Arhgef11	utr3	ENSMUSG00000041977	ProperStrand	16	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.8105
chr17	29071818	29071836	antisense	Gm16191	.	ENSMUSG00000087693	ProperStrand	25	chr16	23111777	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.4223
chr11	95238890	95238990	protein_coding	Fam117a	exon	ENSMUSG00000038893	ProperStrand	18	chr16	23110989	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	11	-19.0925
chr17	37064552	37064642	antisense	1700031A10Rik	.	ENSMUSG00000092239	ProperStrand	1	chr16	23111377	23111457	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-inf
chr2	90235301	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	120432385	120432401	protein_coding	Il17ra	exon	ENSMUSG00000002897	ProperStrand	61	1	-4.4311
chr7	140913973	140914784	protein_coding	Dhx32	exon	ENSMUSG00000030986	ProperStrand	100	chr7	117189991	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.4315
chr3	128918587	128918604	protein_coding	Pitx2	exon	ENSMUSG00000028023	NonProperStrand	6	chr5	54389948	54389967	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	1	-15.5065
chrX	12868375	12869729	protein_coding	Ddx3x	exon	ENSMUSG00000000787	ProperStrand	67	chr10	23505152	23505218	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-2.1323
chr1	130240085	130240964	protein_coding	Mcm6	exon	ENSMUSG00000026355	ProperStrand	69	chr5	130300462	130300553	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	12	-inf
chr5	116325939	116325980	protein_coding	Cit	exon	ENSMUSG00000029516	ProperStrand	45	chr6	124665421	124665521	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	1	-7.5075
chr14	93575981	93575998	protein_coding	Pcdh9	intron	ENSMUSG00000055421	ProperStrand	59	chr11	106362313	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-5.8755
chr14	76945084	76945152	protein_coding	Serp2	intron	ENSMUSG00000052584	ProperStrand	2	chr16	23110908	23110998	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr7	13516159	13516204	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr9	120038468	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	7	-3.5556
chr5	139710646	139710736	protein_coding	Sun1	exon	ENSMUSG00000036817	ProperStrand	108	chr8	98270001	98270081	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-4.4070
chr7	3611908	3611926	protein_coding	Leng1	utr3	ENSMUSG00000078813	ProperStrand	5	chr11	69481356	69481446	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-8.1843
chr7	52303823	52303849	protein_coding	Prr12	exon	ENSMUSG00000046574	ProperStrand	86	chr9	110544350	110544366	protein_coding	Nbeal2	exon	ENSMUSG00000056724	ProperStrand	161	1	-10.6091
chr4	46482805	46484295	protein_coding	Anp32b	exon	ENSMUSG00000028333	ProperStrand	229	chr2	158182156	158182200	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	6	-14.3887
chr3	90017177	90017555	protein_coding	Rps27	exon	ENSMUSG00000090733	ProperStrand	40	chr11	74718981	74719010	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	1	-9.8415
chr5	54389949	54389967	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	chr11	68886978	68887038	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-1.9183
chr18	77315281	77315371	protein_coding	Pias2	intron	ENSMUSG00000025423	ProperStrand	52	chr2	157221780	157221860	protein_coding	Manbal	utr3	ENSMUSG00000063019	ProperStrand	11	1	-16.9912
chr9	98481668	98482743	protein_coding	Copb2	exon	ENSMUSG00000032458	ProperStrand	33	chr7	29136611	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.4248
chr4	129865810	129865900	SINE	B1_Mur2	Alu	chr4B1_Mur2129865834	NonProperStrand	1	chr4	129865982	129866072	SINE	PB1D9	Alu	chr4PB1D9129865972	NonProperStrand	1	1	-inf
chr10	79880127	79880152	protein_coding	Tcf3	exon	ENSMUSG00000020167	ProperStrand	73	chr17	13112509	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-4.2062
chr12	32603618	32603634	protein_coding	Cog5	intron	ENSMUSG00000035933	ProperStrand	16	chr5	121655100	121655154	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-6.3246
chr4	124596877	124596907	protein_coding	Cdca8	utr3	ENSMUSG00000028873	ProperStrand	41	chrX	138662762	138662779	protein_coding	Nxt2	utr5	ENSMUSG00000042271	ProperStrand	20	1	-16.3385
chr2	130101996	130102086	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	chr17	24856655	24856735	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	20	-19.1542
chr2	107137054	107137074	protein_coding	Kcna4	utr3	ENSMUSG00000042604	NonProperStrand	2	chr11	69483136	69483188	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-9.6187
chr12	76729943	76729960	LINE	L1MA7	L1	chr12L1MA776729795	NonProperStrand	3	chr10	23505154	23505235	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-12.0722
chr8	88077306	88079082	protein_coding	Dnaja2	exon	ENSMUSG00000031701	ProperStrand	39	chr7	91258331	91258347	protein_coding	Fam108c	utr3	ENSMUSG00000038459	NonProperStrand	65	1	-14.0163
chr16	85802545	85802562	protein_coding	Adamts1	exon	ENSMUSG00000022893	ProperStrand	102	chr1	88247740	88247796	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	2	-6.8415
chr1	194571782	194571880	snRNA	ENSMUSG00000064881_U5	.	ENSMUSG00000064881	ProperStrand	187	chr9	15118330	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-1.5517
chr4	149994266	149994331	protein_coding	Rere	utr3	ENSMUSG00000039852	ProperStrand	76	chr3	108357255	108357292	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-4.0908
chr2	90235286	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr3	127382745	127382761	protein_coding	Alpk1	exon	ENSMUSG00000028028	ProperStrand	19	1	-6.7268
chr15	96423000	96440338	protein_coding	Slc38a1	exon	ENSMUSG00000023169	ProperStrand	69	chr8	120122387	120125037	protein_coding	Plcg2	exon	ENSMUSG00000034330	ProperStrand	57	1	-13.1351
chr6	117879863	117879903	SINE	PB1D7	Alu	chr6PB1D7117879851	ProperStrand	1	chr15	79913288	79913340	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-inf
chr4	63389602	63389618	protein_coding	Tnfsf15	utr3	ENSMUSG00000050395	NonProperStrand	121	chr9	64024930	64024998	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	1	-7.7405
chr5	108465424	108465514	SINE	B1_Mur2	Alu	chr5B1_Mur2108465400	NonProperStrand	1	chr5	108465656	108465736	SINE	B3	B2	chr5B3108465617	ProperStrand	1	1	-inf
chr1	133252390	133252451	protein_coding	Srgap2	intron	ENSMUSG00000026425	ProperStrand	299	chr1	9932549	9932627	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-4.5833
chr6	88841737	88841827	protein_coding	Mcm2	exon	ENSMUSG00000002870	ProperStrand	83	chr3	123210899	123210979	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.5608
chr1	176422679	176422769	LTR	ORR1A4-int	MaLR	chr1ORR1A4-int176422526	NonProperStrand	1	chrX	147849067	147849147	protein_coding	Fam120c	intron	ENSMUSG00000025262	ProperStrand	6	1	-inf
chr12	110892846	110892903	snoRNA	ENSMUSG00000064621_AF357355	.	ENSMUSG00000064621	ProperStrand	60	chr18	35714189	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-3.4429
chr1	170050112	170050128	antisense	RP23-45N11.1	.	ENSMUSG00000093538	NonProperStrand	1	chr16	87399063	87400334	protein_coding	Ltn1	exon	ENSMUSG00000052299	ProperStrand	49	1	-inf
chr9	63868722	63868739	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	chr14	33005045	33005237	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	2	-0.9770
chr13	9833566	9833651	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr13	90233361	90233412	protein_coding	Tmem167	intron	ENSMUSG00000012422	ProperStrand	11	1	-8.3583
chr12	85702756	85702772	protein_coding	Coq6	utr5	ENSMUSG00000021235	ProperStrand	15	chr19	8963027	8963082	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.8348
chr8	32260351	32260427	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	chr19	17900099	17900117	snoRNA	ENSMUSG00000089540_snoU13	.	ENSMUSG00000089540	ProperStrand	99	8	-inf
chr17	24301410	24301500	protein_coding	Atp6v0c	exon	ENSMUSG00000024121	ProperStrand	75	chr5	130300420	130300500	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.1352
chr7	141587357	141587376	LINE	L1ME3	L1	chr7L1ME3141587027	NonProperStrand	7	chr12	60141409	60141509	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	6	-inf
chr11	14961829	14961849	LINE	Lx	L1	chr11Lx14961726	ProperStrand	93	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-7.7177
chr6	82678894	82679541	protein_coding	Hk2	exon	ENSMUSG00000000628	ProperStrand	88	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-0.7125
chr9	66305344	66306023	protein_coding	Herc1	exon	ENSMUSG00000038664	ProperStrand	81	chr17	24857729	24857819	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	5	-9.2858
chr12	76774591	76774677	LTR	RLTR14	ERV1	chr12RLTR1476774334	NonProperStrand	3	chr10	80641718	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	3	-inf
chr7	19590197	19590213	protein_coding	Irf2bp1	exon	ENSMUSG00000044030	NonProperStrand	81	chr7	116663704	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.0123
chr13	75502885	75502975	LTR	ETnERV2-int	ERVK	chr13ETnERV2-int75502905	ProperStrand	1	chr1	79603781	79603861	protein_coding	Ap1s3	utr3	ENSMUSG00000054702	NonProperStrand	11	1	-inf
chr5	31260278	31260365	protein_coding	Preb	exon	ENSMUSG00000045302	ProperStrand	4	chr7	117189989	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-8.8371
chr2	90235293	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	mmu-miR-295-3p	2	22	miRNA	mmu-miR-295-3p	.	mmu-miR-295-3p	ProperStrand	19	1	-6.7268
chr2	157119950	157120991	protein_coding	Rpn2	exon	ENSMUSG00000027642	ProperStrand	363	chr1	162968441	162968495	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-2.6950
chr2	29770266	29770322	protein_coding	Odf2	exon	ENSMUSG00000026790	ProperStrand	58	chrX	152009278	152009294	protein_coding	Ptchd1	exon	ENSMUSG00000041552	NonProperStrand	294	1	-10.1964
chr15	99070172	99070188	protein_coding	Kcnh3	exon	ENSMUSG00000037579	NonProperStrand	44	chr16	23110526	23110557	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.0046
chr19	6316901	6317227	protein_coding	Cdc42bpg	exon	ENSMUSG00000024769	ProperStrand	90	chrX	84483709	84483731	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-7.4401
chr13	62235883	62235905	protein_coding	Zfp808	intron	ENSMUSG00000074867	ProperStrand	4	chr7	52381737	52381789	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-13.2407
chr1	70083046	70083064	protein_coding	Spag16	intron	ENSMUSG00000053153	ProperStrand	16	chr12	88778746	88778768	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-9.1615
chr11	78088683	78090545	protein_coding	2610507B11Rik	exon	ENSMUSG00000010277	ProperStrand	246	chr6	39370099	39370199	protein_coding	Mkrn1	exon	ENSMUSG00000029922	ProperStrand	177	1	-8.3194
chr5	130277503	130284992	protein_coding	Psph	utr5	ENSMUSG00000029446	ProperStrand	40	chr9	120037976	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-5.4940
chr8	25656321	25656338	protein_coding	Ido2	intron	ENSMUSG00000031549	NonProperStrand	29	chr4	122968597	122968658	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-7.7316
chr3	137849424	137849440	protein_coding	4930579F01Rik	utr5	ENSMUSG00000012042	NonProperStrand	156	chr9	64659390	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-7.0228
chr7	74881318	74881334	protein_coding	Synm	exon	ENSMUSG00000030554	NonProperStrand	2	chr16	57391632	57391732	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	1	-17.8932
chr2	33653992	33654054	protein_coding	Fam125b	intron	ENSMUSG00000038740	ProperStrand	28	chr16	23110945	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-3.6312
chr2	57090363	57120398	protein_coding	Gpd2	utr5	ENSMUSG00000026827	ProperStrand	93	chrX	103389834	103389986	protein_coding	Pgk1	exon	ENSMUSG00000062070	ProperStrand	484	1	-8.2565
chr7	152047640	152047730	protein_coding	Fgf4	exon	ENSMUSG00000050917	ProperStrand	66	chr9	15119302	15119373	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-4.9241
chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	chr9	120038580	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-0.9507
chr11	118900007	118900024	protein_coding	Cbx8	exon	ENSMUSG00000025578	ProperStrand	95	chr11	44645983	44646001	protein_coding	Ebf1	intron	ENSMUSG00000057098	NonProperStrand	6	1	-17.0476
chr14	51439345	51439374	protein_coding	Parp2	exon	ENSMUSG00000036023	ProperStrand	50	chr18	33954874	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-3.8442
chr16	55605928	55605948	LTR	MLT2B1	ERVL	chr16MLT2B155605666	ProperStrand	1	chr7	19844348	19844800	protein_coding	Vasp	exon	ENSMUSG00000030403	ProperStrand	28	1	-inf
chr11	11780556	11780621	protein_coding	Ddc	exon	ENSMUSG00000020182	ProperStrand	19	chr18	63908609	63908625	protein_coding	Wdr7	intron	ENSMUSG00000040560	NonProperStrand	180	1	-13.4461
chr9	62222553	62225117	protein_coding	Anp32a	exon	ENSMUSG00000032249	ProperStrand	75	chr1	162965531	162965588	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.8761
chr1	62791997	62792087	protein_coding	Nrp2	exon	ENSMUSG00000025969	ProperStrand	35	chr11	68886928	68887008	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-5.1817
chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	chr9	120037971	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-2.2664
chr4	116991019	116991036	protein_coding	Rnf220	intron	ENSMUSG00000028677	ProperStrand	131	chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	1	-10.9985
chr1	88247550	88253258	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chr7	117189941	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	11	-4.1020
chr15	76371908	76371925	protein_coding	Slc52a2	utr3	ENSMUSG00000022560	NonProperStrand	25	chr11	97643026	97643077	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.0636
chrX	71589885	71589904	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr5	130295414	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-2.3446
chr18	63099952	63100055	protein_coding	Apcdd1	intron	ENSMUSG00000071847	ProperStrand	3	chr15	79908929	79908983	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-11.7928
chr15	76735313	76735333	protein_coding	Rpl8	exon	ENSMUSG00000003970	ProperStrand	191	chr19	46079316	46079332	protein_coding	Hps6	exon	ENSMUSG00000074811	ProperStrand	56	1	-11.1293
chr1	95641320	95641411	protein_coding	Thap4	intron	ENSMUSG00000026279	ProperStrand	10	chr13	67507999	67508079	protein_coding	Zfp459	utr3	ENSMUSG00000055560	NonProperStrand	1	1	-inf
chr6	70794802	70794819	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	1	-7.3074
chr11	101440258	101440274	protein_coding	Nbr1	intron	ENSMUSG00000017119	ProperStrand	91	chr8	113362486	113362512	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	1	-8.4315
chr18	65047494	65047512	protein_coding	Nedd4l	utr5	ENSMUSG00000024589	NonProperStrand	15	chr19	8963024	8963124	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.8348
chr14	87864697	87864777	protein_coding	Tdrd3	intron	ENSMUSG00000022019	NonProperStrand	46	chr1	181679628	181679718	protein_coding	Ahctf1	intron	ENSMUSG00000026491	ProperStrand	39	1	-14.7178
chr1	137995413	137995430	protein_coding	Cacna1s	intron	ENSMUSG00000026407	NonProperStrand	37	chr4	131908257	131908297	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.1700
chr15	82984223	82984284	protein_coding	Cyb5r3	utr3	ENSMUSG00000018042	ProperStrand	22	chr5	130300456	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	3	-10.5938
chr8	109505078	109536340	protein_coding	Sntb2	utr3	ENSMUSG00000041308	ProperStrand	41	chr16	23110909	23111010	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-2.4460
chr1	50983884	50983942	protein_coding	Tmeff2	intron	ENSMUSG00000026109	NonProperStrand	3	chr4	131866161	131866251	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-9.8903
chr15	78939631	78939647	protein_coding	Micall1	utr5	ENSMUSG00000033039	ProperStrand	48	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-4.6608
chr16	4696469	4697287	protein_coding	Dnaja3	exon	ENSMUSG00000004069	ProperStrand	13	chr10	110918674	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	4	-20.3013
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr11	55296275	55296328	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-0.7817
chr11	75119641	75119697	protein_coding	Rpa1	exon	ENSMUSG00000000751	ProperStrand	37	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-7.8904
chr13	23713747	23713847	protein_coding	Hist1h1e	exon	ENSMUSG00000051627	ProperStrand	41	chr17	35087894	35087933	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-5.9466
chr17	45704801	45704818	protein_coding	Hsp90ab1	utr3	ENSMUSG00000023944	ProperStrand	1627	chr18	12172461	12172477	protein_coding	6030446N20Rik	intron	ENSMUSG00000049411	ProperStrand	235	1	-4.0833
chr1	34493781	34493797	protein_coding	Ccdc115	utr3	ENSMUSG00000042111	ProperStrand	7	chr7	116663633	116663693	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-6.6732
chr5	68010531	68010608	protein_coding	Atp8a1	utr3	ENSMUSG00000037685	ProperStrand	20	chr10	23505152	23505197	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.0137
chr7	71496184	71496212	protein_coding	Fan1	intron	ENSMUSG00000033458	ProperStrand	4	chr2	162356087	162356104	protein_coding	Ptprt	intron	ENSMUSG00000053141	NonProperStrand	46	1	-19.8408
chr5	100855902	100855972	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr3	87718116	87718451	protein_coding	Hdgf	exon	ENSMUSG00000004897	ProperStrand	117	2	-8.7307
chr2	166780478	166780506	protein_coding	Stau1	exon	ENSMUSG00000039536	ProperStrand	8	chr11	77995191	77995229	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-10.2911
chrX	166424636	166424672	protein_coding	Mid1	intron	ENSMUSG00000035299	ProperStrand	209	chr1	180267183	180267280	protein_coding	Hnrnpu	exon	ENSMUSG00000039630	ProperStrand	286	3	-17.2217
chr10	80641721	80641757	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	chr3	95980359	95980407	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	2	-2.9290
chr1	173930648	173930687	SINE	B3A	B2	chr1B3A173930515	ProperStrand	5	chr14	68294792	68294878	protein_coding	Cdca2	utr3	ENSMUSG00000048922	ProperStrand	50	5	-inf
chr2	167340185	167340221	protein_coding	Rnf114	exon	ENSMUSG00000006418	ProperStrand	18	chr16	23110902	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7867
chr14	124353869	124353886	protein_coding	Itgbl1	exon	ENSMUSG00000032925	ProperStrand	159	chr1	63225253	63225284	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	1	-6.8954
chr7	19661962	19661978	protein_coding	Dmwd	exon	ENSMUSG00000030410	ProperStrand	41	chr15	79908929	79908955	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	2	-10.1066
chr1	59539683	59539700	protein_coding	Fzd7	utr5	ENSMUSG00000041075	ProperStrand	373	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-1.9004
chrX	90827379	90827395	protein_coding	Pola1	exon	ENSMUSG00000006678	ProperStrand	83	chr5	108336363	108336411	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-4.2600
chr7	134671415	134671517	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	chr19	8799021	8799052	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-1.0807
chr16	30388434	30388451	protein_coding	Atp13a3	utr5	ENSMUSG00000022533	ProperStrand	45	chr12	106269300	106269400	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-4.6898
chr3	85943025	85943049	protein_coding	Rps3a	exon	ENSMUSG00000028081	ProperStrand	177	chr16	22162033	22162053	protein_coding	Igf2bp2	intron	ENSMUSG00000033581	ProperStrand	23	1	-13.0844
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr11	117634262	117635561	protein_coding	Tmc6	exon	ENSMUSG00000025572	ProperStrand	60	2	-10.3167
chr12	111854611	111854641	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr7	117189994	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	3	-0.9229
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr12	70284028	70284086	protein_coding	Rpl36al	exon	ENSMUSG00000049751	ProperStrand	10	1	-11.6319
chr10	80264256	80265164	protein_coding	Sf3a2	exon	ENSMUSG00000020211	ProperStrand	50	chr1	180264035	180264156	protein_coding	Hnrnpu	exon	ENSMUSG00000039630	ProperStrand	286	2	-16.6690
chr11	40564168	40564250	protein_coding	Ccng1	utr3	ENSMUSG00000020326	ProperStrand	30	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	2	-13.7353
chr19	18753744	18764783	protein_coding	2410127L17Rik	exon	ENSMUSG00000024726	ProperStrand	43	chr15	98350205	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-5.4077
chr3	106160053	106160143	LTR	MMETn-int	ERVK	chr3MMETn-int106159977	ProperStrand	1	chr3	106159773	106159853	LTR	RLTRETN_Mm	ERVK	chr3RLTRETN_Mm106159637	ProperStrand	1	1	-inf
chr8	119392609	119392699	LTR	MLT1F1	MaLR	chr8MLT1F1119392453	ProperStrand	1	chr8	119392798	119392878	SINE	B2_Mm2	B2	chr8B2_Mm2119392803	NonProperStrand	1	1	-inf
chr5	144947046	144947063	protein_coding	Lmtk2	utr3	ENSMUSG00000038970	NonProperStrand	10	chr17	35299507	35299566	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	2	-13.4747
chr18	38004198	38004273	protein_coding	Diap1	utr3	ENSMUSG00000024456	ProperStrand	77	chr18	33954869	33954907	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-3.0525
chr17	69581006	69581023	protein_coding	Epb4.1l3	intron	ENSMUSG00000024044	ProperStrand	28	chr11	72260667	72260710	protein_coding	Mybbp1a	exon	ENSMUSG00000040463	ProperStrand	279	1	-11.7730
chr15	20083401	20083418	LINE	Lx	L1	chr15Lx20083212	NonProperStrand	14	chr9	37192069	37192086	protein_coding	Hepacam	intron	ENSMUSG00000046240	NonProperStrand	29	1	-17.8291
chr6	85391567	85391772	protein_coding	Smyd5	exon	ENSMUSG00000033706	ProperStrand	107	chr8	73419656	73419715	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	6	-12.8937
chr9	103950068	103950086	protein_coding	Uba5	intron	ENSMUSG00000032557	ProperStrand	111	chr16	23110526	23110557	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.4833
mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr9	59465202	59466277	protein_coding	Parp6	utr5	ENSMUSG00000025237	ProperStrand	4	1	-11.5429
chr2	144087414	144087463	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	chr7	52381973	52382004	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-0.8111
chr6	125127407	125127465	protein_coding	Ncapd2	exon	ENSMUSG00000038252	ProperStrand	170	chr9	15119722	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.0359
chrX	166411289	166411307	protein_coding-noncoding	Mid1	utr5	ENSMUSG00000035299	ProperStrand	1	chr3	123210912	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-inf
chr1	75240011	75240111	protein_coding	Dnajb2	intron	ENSMUSG00000026203	ProperStrand	4	chrX	34622906	34622943	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-8.6589
chr5	31369102	31369119	protein_coding	Cad	exon	ENSMUSG00000013629	ProperStrand	260	chr11	60352509	60352568	protein_coding	Alkbh5	exon	ENSMUSG00000042650	ProperStrand	203	1	-7.9368
chr18	73693110	73693186	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr9	120038467	120038673	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	24	-2.9378
chr2	128482982	128501925	protein_coding	Anapc1	exon	ENSMUSG00000014355	ProperStrand	38	chr16	23110836	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-3.9655
chr16	21737202	21737282	LINE	Lx5	L1	chr16Lx521736790	ProperStrand	1	chr16	21737305	21737395	LINE	Lx5	L1	chr16Lx521737193	ProperStrand	1	1	-inf
chr14	66149699	66149726	protein_coding	Elp3	utr3	ENSMUSG00000022031	ProperStrand	71	chr18	35716763	35716808	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-3.4564
chr2	112202959	112202975	protein_coding	Slc12a6	utr3	ENSMUSG00000027130	NonProperStrand	72	chr16	23111451	23111489	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.0185
chr3	116471719	116471755	protein_coding	Agl	exon	ENSMUSG00000033400	ProperStrand	18	chr1	42911488	42911508	protein_coding	Mrps9	intron	ENSMUSG00000060679	ProperStrand	26	1	-17.2234
chr16	22401871	22401971	protein_coding	Etv5	exon	ENSMUSG00000013089	ProperStrand	88	chr1	162965530	162965585	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.5971
chr4	101331015	101331031	protein_coding	Leprot	utr3	ENSMUSG00000035212	ProperStrand	22	chr4	131865855	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-6.0070
chr12	50952301	50952319	LINE	L1_Mm	L1	chr12L1_Mm50952012	NonProperStrand	6	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-13.3499
chr11	118900007	118900023	protein_coding	Cbx8	exon	ENSMUSG00000025578	ProperStrand	95	chrX	96245892	96245908	protein_coding	Stard8	intron	ENSMUSG00000031216	ProperStrand	142	1	-10.6609
chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-2.5942
chr10	61329160	61330213	protein_coding	Col13a1	exon	ENSMUSG00000058806	ProperStrand	120	chr9	15119968	15120019	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-5.8838
chr11	116978560	117014589	protein_coding	Sec14l1	exon	ENSMUSG00000020823	ProperStrand	71	chr19	8799856	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	2	-7.6708
chr16	30274867	30274884	protein_coding	Lrrc15	intron	ENSMUSG00000052316	ProperStrand	2	chr7	54110751	54110805	protein_coding	Ldha	utr3	ENSMUSG00000063229	ProperStrand	280	1	-17.8464
chr1	59268326	59272085	protein_coding	Als2	exon	ENSMUSG00000026024	ProperStrand	32	chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-7.7085
chr8	13107363	13107453	protein_coding	Cul4a	intron	ENSMUSG00000031446	ProperStrand	36	chr12	106269359	106269439	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-5.1229
chr8	113447150	113447171	protein_coding	St3gal2	intron	ENSMUSG00000031749	ProperStrand	206	chr3	68889097	68889197	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-1.2501
chr6	72389161	72389177	protein_coding	Mat2a	intron	ENSMUSG00000053907	NonProperStrand	11	chr2	32818803	32818886	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-8.8904
chr10	67559558	67559610	protein_coding	Arid5b	exon	ENSMUSG00000019947	ProperStrand	43	chr19	8799835	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	4	-17.1239
mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr11	98190871	98190888	protein_coding	Neurod2	utr5	ENSMUSG00000038255	ProperStrand	15	1	-8.6903
chr8	7471861	7471951	LINE	Lx8	L1	chr8Lx87471836	ProperStrand	1	chr8	7472003	7472083	LINE	Lx9	L1	chr8Lx97471982	NonProperStrand	1	1	-inf
chrX	99381802	99381889	protein_coding	Rps4x	exon	ENSMUSG00000031320	ProperStrand	139	chr2	130101257	130101310	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	4	-15.3782
chr8	73419649	73419702	protein_coding	Rpl18a	intron	ENSMUSG00000045128	ProperStrand	394	chr5	74489575	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-0.7963
chr2	121949510	121949526	protein_coding	Patl2	exon	ENSMUSG00000027233	ProperStrand	270	chr3	108357254	108357392	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	4	-7.1982
chr1	133421609	133421699	protein_coding	Srgap2	utr5	ENSMUSG00000026425	ProperStrand	299	chr9	120039539	120039619	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	3	-2.7556
chr5	138177520	138179046	protein_coding	6430598A04Rik	exon	ENSMUSG00000045348	ProperStrand	7	chr4	131908235	131908282	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-5.3201
chr11	115200753	115200770	protein_coding	Otop3	exon	ENSMUSG00000018862	ProperStrand	59	chr7	116663711	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.5406
chr15	42014869	42014959	LINE	L1VL1	L1	chr15L1VL142014249	NonProperStrand	1	chr15	58367282	58367362	protein_coding	Fer1l6	intron	ENSMUSG00000037106	NonProperStrand	5	1	-inf
chr6	142983668	143007930	protein_coding	5730419I09Rik	intron	ENSMUSG00000030279	ProperStrand	81	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-4.7816
chr2	166853926	166854791	protein_coding	Ddx27	exon	ENSMUSG00000017999	ProperStrand	55	chr7	116663698	116663759	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.6620
chr6	24684480	24684497	protein_coding	Hyal6	exon	ENSMUSG00000029679	NonProperStrand	114	chr2	130101241	130101300	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-5.3314
chr1	153732651	153732672	protein_coding	1700025G04Rik	utr3	ENSMUSG00000032666	NonProperStrand	35	chr10	127560676	127560886	protein_coding	Baz2a	exon	ENSMUSG00000040054	ProperStrand	274	15	-19.9112
chr4	126541309	126541410	protein_coding	Zmym4	utr3	ENSMUSG00000042446	ProperStrand	94	chr11	6428035	6428098	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.4052
chrX	156315499	156315519	protein_coding	Sh3kbp1	intron	ENSMUSG00000040990	ProperStrand	67	chr3	123210855	123210974	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	4	-7.3373
chr16	16879088	16879418	protein_coding	Top3b	exon	ENSMUSG00000022779	ProperStrand	36	chr8	32260335	32260385	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-5.6239
chr18	35414275	35414340	protein_coding	Ctnna1	utr3	ENSMUSG00000037815	ProperStrand	115	chr7	116664797	116664887	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.5062
chr19	58774013	58774093	SINE	MIRb	MIR	chr19MIRb58773925	NonProperStrand	1	chr19	58752089	58752179	protein_coding	Pnlip	intron	ENSMUSG00000046008	ProperStrand	1	1	-inf
chr5	42179197	42179287	protein_coding	Bod1l	utr3	ENSMUSG00000061755	ProperStrand	43	chr10	23505187	23505267	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.7183
chr9	61767720	61768871	protein_coding	Kif23	exon	ENSMUSG00000032254	ProperStrand	41	chr7	116663683	116663763	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.1845
chr2	179322377	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	ProperStrand	171	chr7	29136537	29136653	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	3	-2.8026
chr19	10525980	10525997	protein_coding	Syt7	utr3	ENSMUSG00000024743	NonProperStrand	17	chr16	23110965	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.8783
chr18	32417685	32417712	protein_coding	Ercc3	intron	ENSMUSG00000024382	ProperStrand	280	chr11	69483188	69483278	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-0.9169
chr14	69861577	69861593	protein_coding	Slc25a37	utr3	ENSMUSG00000034248	ProperStrand	37	chr4	131865855	131865931	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-9.2958
chr10	59762551	59762641	protein_coding	Psap	exon	ENSMUSG00000004207	NonProperStrand	4	chr15	34237149	34237169	protein_coding	Matn2	intron	ENSMUSG00000022324	ProperStrand	8	2	-19.3380
chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	chr13	49779666	49779805	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	7	-5.3326
chr11	23658681	23658709	protein_coding	Rel	intron	ENSMUSG00000020275	ProperStrand	3	chr11	62418038	62418085	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	2	-inf
chr16	90498471	90498571	protein_coding	Hunk	utr3	ENSMUSG00000053414	ProperStrand	104	chr11	62416635	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	5	-16.8442
chr2	148697646	148697704	protein_coding	Cst3	utr3	ENSMUSG00000027447	ProperStrand	13	chr8	13876112	13876202	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-10.2446
chr11	106362337	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	chr9	64022854	64022881	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	2	-2.2884
chr8	123096238	123096547	protein_coding	Gse1	exon	ENSMUSG00000031822	ProperStrand	97	chr11	69483155	69483274	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-3.0920
chr2	26493474	26493523	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr15	81066062	81066078	protein_coding	Mchr1	utr5	ENSMUSG00000050164	ProperStrand	4	1	-11.8409
chr16	4886395	4886411	protein_coding	Mgrn1	exon	ENSMUSG00000022517	NonProperStrand	157	chr11	77995189	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-4.3191
chr10	76721512	76721528	protein_coding	Gm10941	utr3	ENSMUSG00000078444	ProperStrand	8	chr1	129271729	129271778	snoRNA	ENSMUSG00000065687_snoU6-53	.	ENSMUSG00000065687	ProperStrand	78	1	-16.8259
chr11	29879711	29879801	protein_coding	Eml6	intron	ENSMUSG00000044072	ProperStrand	7	chr7	54443626	54443716	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	1	-16.0422
chr13	74494656	74494675	protein_coding	Ccdc127	utr3	ENSMUSG00000021578	NonProperStrand	54	chr4	131865855	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-3.5200
chrX	71015648	71015664	protein_coding	Plxnb3	exon	ENSMUSG00000031385	ProperStrand	424	chr19	61302541	61302709	protein_coding	Csf2ra	exon	ENSMUSG00000059326	ProperStrand	17	1	-11.9575
chr19	17078304	17081117	protein_coding	Prune2	exon	ENSMUSG00000039126	ProperStrand	49	chr4	15208158	15208214	protein_coding	Tmem64	exon	ENSMUSG00000043252	ProperStrand	32	1	-14.9998
chr8	81330044	81330062	protein_coding	Lsm6	utr3	ENSMUSG00000031683	ProperStrand	13	chr19	8798740	8798813	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-7.8530
chr9	78326905	78326968	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr8	14846529	14846547	protein_coding	Dlgap2	exon	ENSMUSG00000047495	ProperStrand	20	1	-8.5388
chr10	126501941	126501981	protein_coding	Cdk4	exon	ENSMUSG00000006728	ProperStrand	47	chr16	32758989	32759006	protein_coding	Muc4	intron	ENSMUSG00000079620	NonProperStrand	6	1	-18.6791
chr14	124353869	124353886	protein_coding	Itgbl1	exon	ENSMUSG00000032925	ProperStrand	159	chr1	162965531	162965600	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.6373
chr10	79879961	79880064	protein_coding	Tcf3	exon	ENSMUSG00000020167	NonProperStrand	24	chr18	73693162	73693188	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-7.3454
chr5	125255885	125257531	protein_coding	Dnahc10	exon	ENSMUSG00000038011	NonProperStrand	13	chr5	130300419	130300522	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-5.3899
chr2	91855323	91855400	protein_coding	Creb3l1	intron	ENSMUSG00000027230	ProperStrand	12	chr9	59513032	59513102	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	1	-10.4463
chr17	4082098	4082170	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr14	51427115	51427203	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	1	-3.9656
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr9	120039533	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	4	-1.9898
chr16	27529009	27529089	Other	RMER1C	Other	chr16RMER1C27528856	NonProperStrand	1	chr16	27529239	27529329	Other	RMER1C	Other	chr16RMER1C27529220	ProperStrand	1	1	-inf
chr15	81739954	81739997	protein_coding	Aco2	exon	ENSMUSG00000022477	ProperStrand	237	chr8	73419657	73419757	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-1.9347
chr10	80860700	80860717	protein_coding	Nfic	utr3	ENSMUSG00000055053	ProperStrand	69	chr7	4694195	4694296	protein_coding	Suv420h2	utr5	ENSMUSG00000059851	ProperStrand	60	1	-13.0336
chr18	82662186	82662202	protein_coding	Mbp	intron	ENSMUSG00000041607	NonProperStrand	185	chr15	98570715	98570773	protein_coding	Arf3	utr3	ENSMUSG00000051853	ProperStrand	41	1	-11.8230
chr5	108334226	108336484	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	chr16	38158094	38158174	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	1	-0.9170
chr7	86843772	86844106	protein_coding	Kif7	exon	ENSMUSG00000050382	ProperStrand	12	chr16	23110984	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.4686
chr3	155453747	155453764	LINE	Lx4A	L1	chr3Lx4A155453308	ProperStrand	16	chr11	55296276	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-8.8389
chr2	122174887	122174908	protein_coding	Shf	utr3	ENSMUSG00000033256	ProperStrand	6	chr4	131866193	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-8.2891
chr12	74278173	74278190	protein_coding	Mnat1	intron	ENSMUSG00000021103	ProperStrand	5	chr11	6428035	6428163	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-8.1751
chr11	78313939	78313956	protein_coding	Vtn	exon	ENSMUSG00000017344	ProperStrand	188	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-5.4864
chr7	142890275	142890298	protein_coding	Mki67	exon	ENSMUSG00000031004	ProperStrand	286	chr9	110842485	110842562	protein_coding	Tdgf1	utr3	ENSMUSG00000032494	ProperStrand	218	5	-inf
chr4	131908440	131908463	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr8	25920545	25921169	protein_coding	Adam5	exon	ENSMUSG00000031554	ProperStrand	49	1	-7.6636
chr3	57450646	57450662	protein_coding	Commd2	exon	ENSMUSG00000036513	ProperStrand	23	chr16	23110527	23110578	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.2122
chr2	158182156	158182179	lincRNA	9430008C03Rik	intron	ENSMUSG00000085385	ProperStrand	1039	chr5	150025754	150025822	protein_coding	Uspl1	exon	ENSMUSG00000041264	ProperStrand	20	2	-15.5405
chr19	46360335	46360351	protein_coding	Gbf1	exon	ENSMUSG00000025224	NonProperStrand	7	chr18	46447239	46447304	protein_coding	Ccdc112	exon	ENSMUSG00000071855	ProperStrand	5	1	-19.9473
chr2	26493428	26493518	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	5	-5.8178
chr13	9833563	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr10	127563915	127563996	protein_coding	Baz2a	utr3	ENSMUSG00000040054	ProperStrand	274	3	-5.8993
chr4	117552233	117552313	protein_coding	B4galt2	intron	ENSMUSG00000028541	ProperStrand	11	chr3	68889026	68889116	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-6.5623
chr17	80539785	80539874	protein_coding	Galm	intron	ENSMUSG00000035473	ProperStrand	26	chr16	23110971	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.2392
chr5	121857282	121891788	protein_coding	Naa25	utr3	ENSMUSG00000042719	ProperStrand	95	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-7.2177
chr11	80415108	80415125	protein_coding	Myo1d	exon	ENSMUSG00000035441	ProperStrand	144	chr11	116299617	116299671	protein_coding	Fam100b	utr3	ENSMUSG00000050628	ProperStrand	97	1	-10.5910
chr18	24113579	24113596	protein_coding	Zfp397	intron	ENSMUSG00000024276	ProperStrand	22	chr19	9051857	9051957	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	1	-11.4956
chr6	125127837	125127895	protein_coding	Ncapd2	exon	ENSMUSG00000038252	ProperStrand	170	chr7	117166740	117166830	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-2.8825
chr5	115177508	115177544	protein_coding	Git2	utr3	ENSMUSG00000041890	ProperStrand	20	chr2	130101270	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-8.7990
chr1	120457596	120457675	protein_coding	Clasp1	exon	ENSMUSG00000064302	ProperStrand	23	chr11	97642991	97643089	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	3	-10.3230
chr13	9833553	9833652	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr7	4434453	4434599	protein_coding	Ppp1r12c	exon	ENSMUSG00000019254	ProperStrand	15	1	-7.7172
chr4	109105596	109105613	protein_coding	Ttc39a	exon	ENSMUSG00000028555	ProperStrand	51	chr3	95980359	95980409	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-7.1809
chr11	102294588	102294612	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chrX	34622905	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	5	-2.5493
chr5	112758435	112758451	protein_coding	Tfip11	exon	ENSMUSG00000029345	ProperStrand	111	chr19	8800085	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-6.3880
chr14	75235329	75235350	protein_coding	Lrch1	intron	ENSMUSG00000068015	NonProperStrand	3	chr4	116862555	116862663	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	1	-15.2174
chr3	37750806	37750824	LINE	L1_Mus3	L1	chr3L1_Mus337750762	ProperStrand	38	chr18	35716684	35716718	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.9566
chr16	56035865	56035963	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	chr4	131865381	131865476	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	3	-2.1843
chr1	182733010	182733100	protein_coding	H3f3a	utr3	ENSMUSG00000060743	ProperStrand	46	chrX	34622940	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-3.6584
chr2	25854584	25860942	protein_coding	Ubac1	exon	ENSMUSG00000036352	ProperStrand	25	chr16	23111398	23111450	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.6475
chr15	85172453	85172553	protein_coding	Atxn10	intron	ENSMUSG00000016541	ProperStrand	96	chr11	48616657	48616708	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	1	-8.4053
chr3	96218548	96218638	misc_RNA	Telomerase-vert	.	ENSMUSG00000064796	NonProperStrand	6	chr9	15119296	15119386	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	NonProperStrand	3	1	-inf
chr1	59539683	59539700	protein_coding	Fzd7	utr5	ENSMUSG00000041075	ProperStrand	373	chr1	162967735	162967805	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	1	-6.6080
chr4	131908687	131908750	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	chr6	131330285	131330432	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	ProperStrand	408	9	-1.5857
chr14	61379885	61379947	protein_coding	Spata13	utr3	ENSMUSG00000021990	ProperStrand	28	chr11	97489600	97489617	protein_coding	E130012A19Rik	exon	ENSMUSG00000043439	NonProperStrand	110	1	-13.6393
chr11	95631385	95631457	protein_coding	Zfp652	utr3	ENSMUSG00000075595	ProperStrand	48	chr3	95980392	95980410	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-7.3018
chr7	26481008	26481026	protein_coding	Tgfb1	intron	ENSMUSG00000002603	ProperStrand	17	chr19	45857779	45857813	protein_coding	Mgea5	utr5	ENSMUSG00000025220	ProperStrand	53	1	-16.1095
chr1	133920220	133920246	protein_coding	Elk4	utr3	ENSMUSG00000026436	ProperStrand	14	chr9	15119633	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-8.9070
chr16	36912518	36912608	protein_coding	Golgb1	exon	ENSMUSG00000034243	ProperStrand	92	chr4	131865375	131865455	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-3.2132
chr7	20310054	20310070	protein_coding	Pvrl2	exon	ENSMUSG00000062300	ProperStrand	110	chr19	8963698	8964526	protein_coding	1810009A15Rik	exon	ENSMUSG00000071653	ProperStrand	5	1	-17.3037
chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	chr9	15130731	15130779	snoRNA	ENSMUSG00000077506_Scarna9	.	ENSMUSG00000077506	ProperStrand	148	1	-6.7963
chr14	80262508	80262524	lincRNA	Gm6999	intron	ENSMUSG00000075495	ProperStrand	265	chr7	117189862	117189913	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-3.3720
chr8	26102584	26102671	protein_coding	Adam9	exon	ENSMUSG00000031555	ProperStrand	7	chr3	108357348	108357438	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-8.8836
chr2	90235298	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	129172808	129172826	LINE	L1MC3	L1	chr7L1MC3129172772	NonProperStrand	1	1	-inf
chrX	70237450	70237471	miRNA	Mir2137	.	ENSMUSG00000089357	ProperStrand	50	chr4	131908687	131908751	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-4.3781
chr19	8798740	8798813	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	chr8	13876096	13876187	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	6	-3.4502
chr10	122477445	122477525	protein_coding	Mon2	intron	ENSMUSG00000034602	ProperStrand	28	chr2	26493366	26493455	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-5.2032
chr7	119934376	119934484	protein_coding	Tead1	intron	ENSMUSG00000055320	ProperStrand	217	chr18	35716811	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-2.8057
chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr5	130300438	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	8	-1.2024
chr3	99003132	99003159	protein_coding	Wars2	intron	ENSMUSG00000004233	NonProperStrand	48	chr14	52829460	52829571	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-8.6495
chr1	162967136	162967178	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	chr5	108336363	108336410	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-0.9735
chr4	144758457	144758474	protein_coding	Vps13d	exon	ENSMUSG00000020220	ProperStrand	59	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-7.7731
chr8	109187844	109188124	protein_coding	Cdh1	exon	ENSMUSG00000000303	ProperStrand	283	chr8	114376549	114376565	protein_coding	Cfdp1	intron	ENSMUSG00000031954	ProperStrand	32	2	-17.9108
chr3	108357359	108357516	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	chr4	41150095	41150157	snoRNA	ENSMUSG00000089265_SNORD121A	.	ENSMUSG00000089265	ProperStrand	370	4	-5.8233
chr5	139717949	139721296	protein_coding	Sun1	exon	ENSMUSG00000036817	ProperStrand	108	chr14	61648824	61648841	protein_coding	Tnfrsf19	intron	ENSMUSG00000060548	ProperStrand	34	1	-13.2775
chr18	73693113	73693139	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr1	63225259	63225322	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	1	-1.5311
chrX	71589885	71589906	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr12	60141338	60141428	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-3.7787
chr10	79256537	79283385	protein_coding	Palm	utr3	ENSMUSG00000035863	ProperStrand	58	chr16	23110828	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-1.5384
chr10	107800758	107800858	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	chr11	106874216	106874254	tRNA	tRNA945-ArgCCG	.	632034	ProperStrand	133	1	-6.4898
chr4	134026588	134026655	protein_coding	Stmn1	exon	ENSMUSG00000028832	ProperStrand	54	chr12	110874223	110874245	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	3	-21.1405
chr13	63628593	63633930	protein_coding	Ptch1	exon	ENSMUSG00000021466	ProperStrand	50	chr11	51551288	51551368	snoRNA	ENSMUSG00000084744_SNORA48	.	ENSMUSG00000084744	ProperStrand	996	1	-8.0640
chr6	122269968	122270058	protein_coding	Phc1	exon	ENSMUSG00000040669	ProperStrand	158	chr5	130295417	130295497	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-3.4161
chr6	25638699	25638715	protein_coding	Gpr37	exon	ENSMUSG00000039904	ProperStrand	49	chr11	62416582	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-5.5616
chr12	55797769	55797884	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	chr15	79908931	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	6	-6.6922
chr12	88778631	88778745	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	chr8	32260334	32260425	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	5	-1.2101
chr11	60544472	60544559	protein_coding	Smcr7	exon	ENSMUSG00000018599	ProperStrand	6	chr17	56753425	56753597	protein_coding	Rpl36	exon	ENSMUSG00000057863	ProperStrand	62	1	-18.0318
chr1	82631590	82631607	rRNA	n-R5s213	.	ENSMUSG00000065055	NonProperStrand	1	chr3	123210925	123210972	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-inf
chr6	117874999	117875079	protein_coding	Hnrnpf	utr3	ENSMUSG00000042079	ProperStrand	147	chr11	117827861	117827937	protein_coding	Socs3	utr3	ENSMUSG00000053113	ProperStrand	137	1	-9.8580
chr11	80707576	80707593	protein_coding	Accn1	exon	ENSMUSG00000020704	ProperStrand	69	chr5	14252800	14252816	protein_coding	Sema3e	utr3	ENSMUSG00000063531	ProperStrand	125	1	-11.5581
chr8	119507826	119511215	protein_coding	Gcsh	exon	ENSMUSG00000034424	ProperStrand	6	chr18	33954816	33954875	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-8.1162
chr8	98269991	98270081	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	chr11	83107825	83107905	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	1	-1.5443
chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	chr5	145532346	145532393	protein_coding	Trrap	intron	ENSMUSG00000045482	ProperStrand	399	1	-5.7319
chr9	44218082	44218124	protein_coding	Rps25	exon	ENSMUSG00000009927	ProperStrand	42	chr17	46873850	46874216	protein_coding	Cnpy3	exon	ENSMUSG00000023973	ProperStrand	85	1	-13.3324
chr18	6785660	6785689	protein_coding	Rab18	intron	ENSMUSG00000073639	ProperStrand	9	chr13	51743583	51743664	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	4	-19.7490
chr13	37989649	37989692	protein_coding	Rreb1	intron	ENSMUSG00000039087	ProperStrand	33	chr16	38158134	38158224	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	2	-15.5720
chr1	60268006	60268096	protein_coding	Nbeal1	intron	ENSMUSG00000073664	ProperStrand	20	chr1	63225596	63225676	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	11	-inf
chr5	23907915	23907931	protein_coding	Abcb8	exon	ENSMUSG00000028973	NonProperStrand	49	chr11	6428059	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-6.0625
chr11	99080698	99081001	protein_coding	Smarce1	exon	ENSMUSG00000037935	ProperStrand	38	chr10	80641718	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	1	-8.4635
chr9	78326977	78327176	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr11	68924484	68924504	tRNA	tRNA400-SerCGA	.	1266677	ProperStrand	7	1	-10.7325
chr2	4974190	4974207	protein_coding	Optn	exon	ENSMUSG00000026672	ProperStrand	451	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	2	-12.2408
chr17	8578983	8578999	processed_transcript	T2	.	ENSMUSG00000058159	ProperStrand	11	chr16	23110453	23110545	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-9.3919
chr12	45073117	45073197	LINE	L1Md_T	L1	chr12L1Md_T45070361	ProperStrand	1	chr7	54442906	54442996	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-inf
chr11	40547311	40547438	protein_coding	Nudcd2	utr5	ENSMUSG00000020328	ProperStrand	34	chr13	113342177	113342194	protein_coding	Il31ra	exon	ENSMUSG00000050377	ProperStrand	583	23	-19.1459
chr8	77582773	77584389	protein_coding	Tom1	exon	ENSMUSG00000042870	ProperStrand	30	chr17	13112468	13112548	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-5.9331
chr1	108290037	108290060	protein_coding	Phlpp1	utr3	ENSMUSG00000044340	ProperStrand	67	chr4	131908809	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-2.1171
chr5	23825941	23825957	protein_coding	Kcnh2	exon	ENSMUSG00000038319	ProperStrand	242	chr5	134790311	134790372	protein_coding	Gtf2i	utr5	ENSMUSG00000060261	ProperStrand	41	1	-11.2854
chr7	149170854	149171340	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	chr11	62416600	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-3.2279
chr8	87426786	87426805	protein_coding	Klf1	exon	ENSMUSG00000054191	NonProperStrand	70	chr2	144087319	144087447	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-6.2409
chr2	119001026	119001042	protein_coding	Dnajc17	intron	ENSMUSG00000034278	ProperStrand	6	chr4	131908689	131908751	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.3738
chr13	23514033	23514076	protein_coding	Abt1	exon	ENSMUSG00000036376	ProperStrand	17	chr8	73419657	73419729	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-9.1331
chr10	90624899	90624949	protein_coding	Tmpo	exon	ENSMUSG00000019961	ProperStrand	57	chr7	116663636	116663726	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	6	-14.8763
chr7	53560939	53560955	protein_coding	Otog	exon	ENSMUSG00000009487	ProperStrand	17	chr8	73419657	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-5.5405
chr7	135123496	135123725	protein_coding	Fus	exon	ENSMUSG00000030795	ProperStrand	162	chr16	38158200	38158226	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	1	-6.6745
chr15	36706008	36706049	protein_coding	Ywhaz	exon	ENSMUSG00000022285	ProperStrand	73	chr4	116827121	116827146	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-6.6512
chr2	130103751	130103808	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	chr10	23506278	23506334	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-2.3906
chr8	81033346	81033415	protein_coding	Slc10a7	utr5	ENSMUSG00000031684	ProperStrand	55	chr7	117189957	117190046	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-3.4918
chr9	20823520	20823620	protein_coding	Icam1	exon	ENSMUSG00000037405	ProperStrand	44	chr7	51503524	51503547	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	10	-inf
chr12	17553062	17553092	protein_coding	Odc1	intron	ENSMUSG00000011179	ProperStrand	173	chr18	35102297	35102342	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-4.5280
chr12	77707234	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	chr11	6428046	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	6	-4.9024
chr18	41878713	41878731	LINE	Lx9	L1	chr18Lx941877827	ProperStrand	1	chr17	24856619	24856683	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-inf
chr17	88077661	88077677	protein_coding	Msh2	exon	ENSMUSG00000024151	ProperStrand	124	chr7	52382753	52382832	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-5.3263
chr2	120802957	120802974	protein_coding	Tmem62	utr5	ENSMUSG00000054484	ProperStrand	6	chr7	117189903	117189954	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-7.9273
chr18	38488712	38488729	protein_coding	Gnpda1	intron	ENSMUSG00000052102	NonProperStrand	3	chr4	116826700	116826750	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	2	-19.9179
chrX	6744149	6744170	protein_coding	Clcn5	intron	ENSMUSG00000004317	ProperStrand	7	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-7.4403
chr13	9170059	9170159	protein_coding	Larp4b	exon	ENSMUSG00000033499	ProperStrand	53	chr9	15118358	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.6960
chr4	21749798	21749856	protein_coding	Usp45	intron	ENSMUSG00000040455	ProperStrand	40	chr5	74489590	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-4.5466
chr7	29136068	29136107	protein_coding	Rps16	exon	ENSMUSG00000037563	ProperStrand	191	chr7	120505355	120505391	protein_coding	Btbd10	intron	ENSMUSG00000038187	ProperStrand	4	2	-19.1281
chr3	87718909	87718985	protein_coding	Hdgf	utr3	ENSMUSG00000004897	ProperStrand	117	chr9	53311127	53311144	protein_coding	Atm	exon	ENSMUSG00000034218	ProperStrand	17	1	-14.5314
chr16	23111812	23111837	protein_coding	Eif4a2	intron	ENSMUSG00000022884	ProperStrand	356	chr17	35299553	35299630	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	3	-4.6656
chr10	85855414	85855431	protein_coding	Syn3	intron	ENSMUSG00000059602	NonProperStrand	40	chr7	29136525	29136575	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.0737
chr15	55049818	55083569	protein_coding	Deptor	exon	ENSMUSG00000022419	ProperStrand	17	chr15	34370545	34370665	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	3	-13.9936
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr16	23111693	23111835	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	7	-1.2732
chr6	120755278	120755376	protein_coding	Atp6v1e1	intron	ENSMUSG00000019210	ProperStrand	22	chr10	23505152	23505196	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-10.1950
chr7	129311263	129312092	protein_coding	Plk1	exon	ENSMUSG00000030867	ProperStrand	146	chr2	29992694	29992825	protein_coding	Tbc1d13	exon	ENSMUSG00000039678	ProperStrand	24	1	-13.3857
chr1	49136890	49136980	LINE	Lx2	L1	chr1Lx249136480	NonProperStrand	1	chr8	56170898	56170988	LINE	L1_Mm	L1	chr8L1_Mm56170568	NonProperStrand	1	1	-inf
chr11	69266814	69266830	protein_coding	Dnahc2	exon	ENSMUSG00000005237	ProperStrand	95	chr15	34167890	34167907	protein_coding	Laptm4b	utr5	ENSMUSG00000022257	NonProperStrand	9	1	-16.2330
chr17	59135251	59135268	LTR	ORR1A2	MaLR	chr17ORR1A259135069	NonProperStrand	12	chr1	9932550	9932603	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-11.0026
chr7	28130235	28130325	protein_coding	Shkbp1	exon	ENSMUSG00000089832	ProperStrand	7	chr18	33954825	33954905	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-7.7828
chr19	30185262	30188299	protein_coding	Gldc	exon	ENSMUSG00000024827	ProperStrand	175	chr5	74489642	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-1.9118
chr11	94352673	94352693	protein_coding	Epn3	exon	ENSMUSG00000010080	NonProperStrand	2	chr6	118980975	118980999	protein_coding	Cacna1c	intron	ENSMUSG00000051331	ProperStrand	46	1	-inf
chr17	35087894	35087911	processed_transcript	1110038B12Rik	.	ENSMUSG00000092203	ProperStrand	126	chr7	52715023	52715123	protein_coding	Ftl1	utr5	ENSMUSG00000050708	ProperStrand	807	2	-10.7159
chr2	57014965	57014987	lincRNA	BB557941	intron	ENSMUSG00000084938	NonProperStrand	1	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr3	101618554	101618654	protein_coding	Mab21l3	utr3	ENSMUSG00000044313	ProperStrand	11	chr16	23110969	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.6241
chr1	46132922	46132983	protein_coding	Dnahc7b	intron	ENSMUSG00000041144	NonProperStrand	57	chr7	116663698	116663759	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.6000
chr2	90235302	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	ProperStrand	24	chr18	14806341	14806441	snRNA	ENSMUSG00000065369_U1	.	ENSMUSG00000065369	NonProperStrand	3	2	-inf
chr5	113919913	113919930	protein_coding	Wscd2	utr5	ENSMUSG00000085571	NonProperStrand	40	chr5	121655099	121655127	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.5153
chr5	66045084	66045105	protein_coding	Pds5a	intron	ENSMUSG00000029202	ProperStrand	62	chr13	49779667	49779729	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-6.9483
chr18	5748790	5748806	protein_coding	Zeb1	exon	ENSMUSG00000024238	ProperStrand	24	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-10.4435
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr2	30985929	30985949	protein_coding	Fnbp1	intron	ENSMUSG00000075415	NonProperStrand	10	1	-11.4509
chr19	4803498	4803598	protein_coding	Rbm14	exon	ENSMUSG00000006456	ProperStrand	84	chr6	58590654	58590673	protein_coding	Abcg2	intron	ENSMUSG00000029802	NonProperStrand	1	1	-inf
chr5	119214507	119214609	protein_coding	Med13l	utr3	ENSMUSG00000018076	ProperStrand	226	chrX	39448356	39448374	protein_coding	Xiap	exon	ENSMUSG00000025860	ProperStrand	14	8	-inf
chr2	60067748	60067838	protein_coding	March7	exon	ENSMUSG00000026977	NonProperStrand	1	chr16	57391699	57391789	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	1	-inf
chr1	194632046	194632065	LTR	MTEa	MaLR	chr1MTEa194631714	ProperStrand	1	chrX	99445995	99446012	protein_coding	Cited1	utr5	ENSMUSG00000051159	ProperStrand	72	1	-inf
chr6	131330333	131330423	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	ProperStrand	408	chr11	62418014	62418067	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-2.0511
chr19	4041637	4041927	protein_coding	Gstp2	exon	ENSMUSG00000038155	ProperStrand	8	chr11	115935746	115937022	protein_coding	Unc13d	exon	ENSMUSG00000057948	ProperStrand	89	1	-16.6254
chr17	69559598	69559650	protein_coding	Epb4.1l3	exon	ENSMUSG00000024044	ProperStrand	28	chr4	131908236	131908338	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-6.9985
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr11	68886947	68887037	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	3	-1.0293
chr3	89354340	89354357	protein_coding	Kcnn3	intron	ENSMUSG00000000794	NonProperStrand	38	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-11.6854
chr1	163616981	163617071	LINE	Lx9	L1	chr1Lx9163616892	ProperStrand	1	chr1	163616783	163616873	SINE	RSINE1	B4	chr1RSINE1163616787	ProperStrand	1	1	-inf
chr14	47941569	47941586	protein_coding	Mapk1ip1l	utr3	ENSMUSG00000021840	NonProperStrand	16	chrX	148329532	148329570	protein_coding	Huwe1	exon	ENSMUSG00000025261	ProperStrand	501	1	-11.7487
chr1	141319671	141319687	protein_coding	Zbtb41	utr5	ENSMUSG00000033964	NonProperStrand	145	chr11	68886945	68886997	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-2.5448
chr1	24683115	24683205	LTR	ORR1B1	MaLR	chr1ORR1B124682847	ProperStrand	1	chr1	24683258	24683348	LTR	RMER20B	ERVK	chr1RMER20B24683236	NonProperStrand	1	1	-inf
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	35088957	35089026	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	7	-0.9944
chr17	39985356	39985736	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr8	129468746	129468879	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	12	-3.8841
chr4	53873613	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	chr17	35087893	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-1.4406
chr17	6107166	6107183	protein_coding	Tulp4	intron	ENSMUSG00000034377	ProperStrand	164	chrX	20439612	20439665	protein_coding	Syn1	intron	ENSMUSG00000037217	ProperStrand	9	1	-15.1759
chr1	40053934	40053951	protein_coding	Map4k4	exon	ENSMUSG00000026074	ProperStrand	348	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-7.2543
chr19	8977102	8979432	protein_coding	Ganab	exon	ENSMUSG00000071650	ProperStrand	145	chr17	35089181	35089236	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-3.7987
chr3	130974803	130974855	protein_coding	Hadh	exon	ENSMUSG00000027984	ProperStrand	35	chr1	89673764	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	2	-7.1554
chr4	47297380	47299913	protein_coding	Col15a1	exon	ENSMUSG00000028339	ProperStrand	17	chr16	23110896	23110957	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.8783
chr9	44415469	44415492	protein_coding	Ddx6	utr5	ENSMUSG00000032097	ProperStrand	59	chrX	11635848	11635865	protein_coding	Bcor	exon	ENSMUSG00000040363	NonProperStrand	293	1	-10.1688
chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	chr7	52661677	52661693	protein_coding	Kcna7	utr5	ENSMUSG00000038201	ProperStrand	10	1	-11.6319
chr17	4082315	4082415	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr2	144708809	144708825	LTR	MLT1A0	MaLR	chr2MLT1A0144708556	ProperStrand	9	1	-13.8549
chr2	42028705	42028723	protein_coding	Lrp1b	intron	ENSMUSG00000049252	NonProperStrand	39	chr11	83107810	83107903	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	2	-15.3447
chr4	56764074	56764128	protein_coding	Ikbkap	utr3	ENSMUSG00000028431	ProperStrand	44	chr9	15119704	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	6	-17.2574
chr9	110544350	110544366	protein_coding	Nbeal2	exon	ENSMUSG00000056724	ProperStrand	161	chr2	158182229	158182279	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-3.1517
chr9	120037715	120040252	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	chr7	116664792	116664916	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	6	-3.3215
chr9	65221007	65221097	protein_coding	Gm514	intron	ENSMUSG00000086228	ProperStrand	8	chr10	110918548	110918616	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-7.4365
chr17	35643308	35643325	protein_coding	Pou5f1	exon	ENSMUSG00000024406	ProperStrand	104	chr2	24825186	24827046	protein_coding	Wdr85	exon	ENSMUSG00000026975	ProperStrand	323	1	-8.8380
chr15	99072693	99072793	protein_coding	Kcnh3	exon	ENSMUSG00000037579	ProperStrand	24	chr7	52378398	52378458	snoRNA	ENSMUSG00000064767_Snord35b	.	ENSMUSG00000064767	ProperStrand	664	1	-10.3544
chr4	136101981	136101997	protein_coding	Luzp1	utr3	ENSMUSG00000001089	NonProperStrand	47	chr4	131908357	131908455	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.7849
mmu-miR-677-3p	0	24	miRNA	mmu-miR-677-3p	.	mmu-miR-677-3p	ProperStrand	5	chr10	80644809	80644872	protein_coding	Eef2	utr3	ENSMUSG00000034994	ProperStrand	2244	1	-11.2328
chr1	71646179	71646233	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr6	102223814	102227225	protein_coding	Cntn3	exon	ENSMUSG00000030075	NonProperStrand	13	1	-10.9401
chr9	44143291	44143340	protein_coding	H2afx	utr3	ENSMUSG00000049932	ProperStrand	137	chr11	77995237	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-4.5781
chr1	65285078	65290982	protein_coding	Pikfyve	exon	ENSMUSG00000025949	ProperStrand	59	chr9	120037917	120038007	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-4.7382
chr11	77996814	77996879	protein_coding	Rpl23a	intron	ENSMUSG00000058546	ProperStrand	121	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.3495
chr7	30716768	30716840	protein_coding	Zfp74	utr3	ENSMUSG00000059975	ProperStrand	4	chr7	116664819	116664909	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-7.9535
chr8	73419369	73419388	protein_coding	Rpl18a	exon	ENSMUSG00000045128	ProperStrand	394	chr5	122691914	122691930	protein_coding	Hvcn1	utr3	ENSMUSG00000064267	ProperStrand	182	1	-7.3295
chr10	60895517	60895604	protein_coding	Eif4ebp2	utr3	ENSMUSG00000020091	ProperStrand	39	chr5	130300487	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.2732
chr12	110786625	110786642	lincRNA	Meg3	intron	ENSMUSG00000021268	ProperStrand	61	chr8	79705239	79705260	protein_coding	Nr3c2	intron	ENSMUSG00000031618	NonProperStrand	8	1	-17.2497
chr17	26324747	26324848	protein_coding	Axin1	exon	ENSMUSG00000024182	ProperStrand	28	chr11	98694612	98694661	protein_coding	Casc3	utr3	ENSMUSG00000078676	ProperStrand	33	10	-19.4528
chr18	10052132	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	1	-5.0344
chr4	140121137	140121154	protein_coding	Arhgef10l	exon	ENSMUSG00000040964	NonProperStrand	136	chr11	97642952	97643090	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-2.3252
chr16	96015005	96015026	LTR	MER34A1	ERV1	chr16MER34A196014735	ProperStrand	1	chr1	162965979	162965996	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-inf
chr13	54782842	54782921	protein_coding	Rnf44	utr3	ENSMUSG00000034928	ProperStrand	90	chr11	55296270	55296332	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	2	-8.8227
chr18	70728114	70728133	protein_coding	Mbd2	utr5	ENSMUSG00000024513	NonProperStrand	13	chr10	116492003	116492177	protein_coding	Cct2	exon	ENSMUSG00000034024	ProperStrand	100	2	-21.6096
chr15	48563555	48563576	protein_coding	Csmd3	intron	ENSMUSG00000022311	NonProperStrand	25	chr11	62416577	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-6.8981
chr18	63841886	63841912	protein_coding	Txnl1	exon	ENSMUSG00000024583	ProperStrand	7	chr7	116664819	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-6.7161
chr19	29678580	29678596	protein_coding	C030046E11Rik	exon	ENSMUSG00000038658	ProperStrand	104	chr2	166890838	166890858	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	1	-9.2781
chr8	124440363	124440380	protein_coding	Car5a	exon	ENSMUSG00000025317	ProperStrand	7	chr7	116663712	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-6.6732
chrX	148680808	148680870	protein_coding	Kdm5c	exon	ENSMUSG00000025332	ProperStrand	139	chr15	98350183	98350273	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-3.1895
chr10	68578219	68578239	LTR	MT2A	ERVL	chr10MT2A68577899	ProperStrand	21	chr2	130101988	130102105	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	3	-16.7630
chr3	142253358	142253438	LINE	Lx8	L1	chr3Lx8142253266	ProperStrand	1	chr3	144375868	144375958	protein_coding	Sh3glb1	intron	ENSMUSG00000037062	NonProperStrand	7	1	-inf
chr8	52987858	52987878	LINE	Lx2B	L1	chr8Lx2B52987647	NonProperStrand	1	chr19	8798484	8798523	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-inf
chr10	79595464	79595523	protein_coding-noncoding	Dos	utr3	ENSMUSG00000035640	ProperStrand	13	chr9	120037998	120038052	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-7.7542
chr17	84192126	84192152	protein_coding	Mta3	utr3	ENSMUSG00000055817	ProperStrand	9	chr4	131908689	131908750	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.5343
chr4	116862618	116862662	snRNA	ENSMUSG00000064430_U5	.	ENSMUSG00000064430	ProperStrand	560	chr11	77996560	77996622	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	3	-5.4390
chr12	29316567	29318641	protein_coding	Rps7	exon	ENSMUSG00000061477	ProperStrand	129	chr7	117189863	117189943	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-4.7190
chr15	36527746	36527775	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chrX	91435058	91435124	protein_coding	Eif2s3x	utr3	ENSMUSG00000035150	ProperStrand	55	1	-8.0568
chr10	80640916	80641442	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr11	6519810	6519900	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-1.3106
chr10	60202556	60202575	protein_coding	Slc29a3	intron	ENSMUSG00000020100	ProperStrand	23	chr3	130431729	130432051	protein_coding	Rpl34	exon	ENSMUSG00000062006	ProperStrand	51	1	-15.5722
chr2	32817292	32817342	protein_coding	Rpl12	utr5	ENSMUSG00000038900	ProperStrand	167	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	2	-5.5922
chr10	77541563	77541614	protein_coding	Icosl	utr3	ENSMUSG00000000732	ProperStrand	2	chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-13.8971
chr13	65138701	65138718	protein_coding	4932441B19Rik	utr3	ENSMUSG00000074849	NonProperStrand	1	chr19	8799587	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-inf
chr11	55296237	55296327	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	chr3	88497866	88497939	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	2	-2.0431
chr1	88252842	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	chr2	130103781	130103825	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	3	-5.7645
chr18	46757091	46757107	protein_coding	Tmed7	utr5	ENSMUSG00000033184	ProperStrand	15	chr7	116663692	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-5.1056
chr1	162965531	162965564	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	NonProperStrand	10	chr3	68889054	68889154	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	NonProperStrand	26	4	-19.5589
chr12	54574629	54574652	protein_coding	Npas3	intron	ENSMUSG00000021010	ProperStrand	15	chr7	29135868	29136049	protein_coding	Rps16	exon	ENSMUSG00000037563	ProperStrand	191	1	-13.8129
chr10	60563677	60564459	protein_coding	Sgpl1	exon	ENSMUSG00000020097	ProperStrand	34	chrX	34622906	34622942	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-4.2283
chr4	117162919	117169361	protein_coding	Rnf220	utr5	ENSMUSG00000028677	ProperStrand	131	chr2	26494720	26494800	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.7894
chr9	120037919	120038054	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	chr18	35102297	35102366	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	4	-0.9235
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr14	41741911	41741994	protein_coding	Tspan14	intron	ENSMUSG00000037824	ProperStrand	31	1	-6.2512
chr15	98692323	98692423	protein_coding	Mll2	exon	ENSMUSG00000048154	ProperStrand	170	chr16	23111770	23111808	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	16	-19.5599
chr10	95499367	95499383	protein_coding	Eea1	utr3	ENSMUSG00000036499	ProperStrand	82	chr3	123210929	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.5789
chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	chr10	39978345	39978391	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-1.0209
chr11	97030471	97030541	protein_coding	Kpnb1	exon	ENSMUSG00000001440	ProperStrand	197	chr9	70504444	70504461	protein_coding	Fam63b	exon	ENSMUSG00000042444	ProperStrand	8	1	-15.0508
chr5	74489211	74489291	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr15	74417594	74417684	protein_coding	Bai1	exon	ENSMUSG00000034730	ProperStrand	22	2	-12.2478
chr9	86451159	86451196	protein_coding	Pgm3	exon	ENSMUSG00000056131	ProperStrand	6	chr14	31827477	31827515	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-11.6881
chr1	88248582	88248666	snoRNA	ENSMUSG00000064696_SNORD20	.	ENSMUSG00000064696	ProperStrand	89	chr18	35716811	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.5511
chr17	32453268	32453285	protein_coding	Akap8	exon	ENSMUSG00000024045	ProperStrand	339	chr1	162965530	162965594	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	4	-3.4764
chr6	124974850	124974903	protein_coding	Zfp384	exon	ENSMUSG00000038346	ProperStrand	3	chr10	23505152	23505178	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-6.9610
chr7	29171540	29171558	protein_coding	Med29	utr3	ENSMUSG00000003444	NonProperStrand	134	chr4	131866176	131866276	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-2.2453
chr7	117089687	117089734	protein_coding	Dennd5a	intron	ENSMUSG00000035901	ProperStrand	22	chr18	33954880	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-5.4296
chr2	105012751	105012769	protein_coding	Wt1	utr3	ENSMUSG00000016458	NonProperStrand	338	chr5	74489543	74489669	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-0.9770
chr1	138178661	138178677	protein_coding	Camsap2	exon	ENSMUSG00000041570	NonProperStrand	116	chr13	49779667	49779745	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-5.7137
chr6	81992904	81992925	protein_coding	Fam176a	intron	ENSMUSG00000035104	ProperStrand	64	chr13	49779668	49779802	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	2	-11.0927
chr19	37485910	37485968	protein_coding	Kif11	exon	ENSMUSG00000012443	ProperStrand	29	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-8.6932
chr14	78304225	78304241	protein_coding	Epsti1	utr5	ENSMUSG00000022014	NonProperStrand	8	chr4	137813143	137813160	protein_coding	Sh2d5	exon	ENSMUSG00000045349	NonProperStrand	31	1	-18.2982
chr1	12658026	12658116	lincRNA	Gm17644	exon	ENSMUSG00000066918	NonProperStrand	37	chrX	98835600	98835644	protein_coding	Ogt	utr5	ENSMUSG00000034160	ProperStrand	49	2	-inf
chr4	116828431	116828457	protein_coding	Rps8	intron	ENSMUSG00000047675	ProperStrand	262	chr4	116828378	116828424	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-5.4698
chr14	94517878	94517968	LINE	Lx3C	L1	chr14Lx3C94517894	NonProperStrand	1	chr14	94517459	94517539	LINE	Lx9	L1	chr14Lx994517276	ProperStrand	1	1	-inf
chr4	129105762	129105778	protein_coding	Zbtb8b	exon	ENSMUSG00000048485	NonProperStrand	7	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-13.3521
chr3	95692040	95692056	protein_coding-noncoding	BC028528	utr3	ENSMUSG00000038543	ProperStrand	452	chr11	4991909	4991943	protein_coding	Ewsr1	exon	ENSMUSG00000009079	ProperStrand	248	1	-6.4479
chr9	53288780	53288826	protein_coding	Atm	exon	ENSMUSG00000034218	ProperStrand	17	chr16	23111778	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.1536
chr4	154531569	154531619	protein_coding	Ski	exon	ENSMUSG00000029050	ProperStrand	28	chr18	33954825	33954915	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-8.2083
chr11	30000143	30017934	protein_coding	Spnb2	exon	ENSMUSG00000020315	ProperStrand	103	chr16	23110454	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-2.9622
chr15	81524827	81524845	protein_coding	Chadl	exon	ENSMUSG00000063765	ProperStrand	28	chr16	23110828	23110880	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.1386
chr11	115999916	115999932	protein_coding	Mrpl38	exon	ENSMUSG00000020775	NonProperStrand	65	chrX	98277571	98277601	protein_coding	Slc7a3	exon	ENSMUSG00000031297	ProperStrand	8	1	-17.1590
chr7	140182763	140183245	protein_coding	Ctbp2	exon	ENSMUSG00000030970	ProperStrand	89	chr5	74489595	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-3.0571
chr8	13875291	13875396	protein_coding	Zfp828	intron	ENSMUSG00000047710	ProperStrand	32	chrX	34622906	34622956	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	2	-7.2734
chr11	16652549	16652565	protein_coding	Egfr	exon	ENSMUSG00000020122	ProperStrand	13	chr19	10520598	10520619	protein_coding	Syt7	intron	ENSMUSG00000024743	NonProperStrand	17	1	-18.9411
chr5	74489543	74489581	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr14	59854962	59855015	protein_coding	Rcbtb1	utr3	ENSMUSG00000035469	ProperStrand	39	1	-6.4721
chr5	149859987	149860028	protein_coding	Hmgb1	utr3	ENSMUSG00000066551	ProperStrand	99	chr7	116663634	116663724	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.6976
chr8	26939296	26941761	protein_coding	Ash2l	exon	ENSMUSG00000031575	ProperStrand	113	chr1	93342189	93345290	protein_coding	Per2	exon	ENSMUSG00000055866	ProperStrand	114	1	-10.7529
chr11	99885311	99885327	protein_coding	Krt33b	exon	ENSMUSG00000057723	NonProperStrand	352	chr14	31827478	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-3.5359
chr4	86500736	86500754	protein_coding	Rps6	exon	ENSMUSG00000028495	ProperStrand	263	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-4.1126
chr9	120038034	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	chr5	92485107	92485207	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	1	-0.8992
chr16	33057599	33057628	protein_coding	Rpl35a	exon	ENSMUSG00000060636	ProperStrand	33	chr16	23110543	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.5297
chr4	53967571	53967661	LINE	L1Md_T	L1	chr4L1Md_T53966732	ProperStrand	1	chr14	34781038	34781118	protein_coding	Zfp488	utr3	ENSMUSG00000044519	NonProperStrand	39	1	-inf
chr6	124773502	124774166	protein_coding	Usp5	exon	ENSMUSG00000038429	ProperStrand	35	chr8	98269970	98270060	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-6.6063
chrX	148294143	148294233	protein_coding-noncoding	Huwe1	utr5	ENSMUSG00000025261	ProperStrand	1	chr8	32260340	32260420	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-inf
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr9	59518532	59519425	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	1	-2.4559
chr19	46265891	46265970	protein_coding	Gbf1	intron	ENSMUSG00000025224	ProperStrand	50	chr8	48430099	48430189	protein_coding	Stox2	intron	ENSMUSG00000038143	NonProperStrand	10	1	-17.3055
chr7	87226439	87226490	protein_coding	Zfp710	exon	ENSMUSG00000048897	ProperStrand	229	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-5.0926
chr3	68893901	68893991	protein_coding	Kpna4	exon	ENSMUSG00000027782	NonProperStrand	3	chr5	121145834	121145924	protein_coding	Dtx1	intron	ENSMUSG00000029603	NonProperStrand	33	1	-19.4062
chr12	26992861	26992877	protein_coding	Rnf144a	utr3	ENSMUSG00000020642	ProperStrand	15	chr3	123210912	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-4.5915
chr5	108535870	108535886	protein_coding	Mtf2	exon	ENSMUSG00000029267	ProperStrand	39	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-8.6033
chr15	101027388	101027415	protein_coding	Acvr1b	intron	ENSMUSG00000000532	ProperStrand	259	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	1	-5.2745
chr6	19636011	19636033	LINE	Lx	L1	chr6Lx19635613	ProperStrand	4	chr8	13159389	13159405	protein_coding	Lamp1	exon	ENSMUSG00000031447	ProperStrand	92	1	-18.1962
chr17	17089749	17089839	protein_coding	BC002059	intron	ENSMUSG00000060149	ProperStrand	10	chr10	23505200	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-7.3782
chr17	47391321	47391338	protein_coding	Trerf1	intron	ENSMUSG00000064043	ProperStrand	56	chr1	88248596	88248660	snoRNA	ENSMUSG00000064696_SNORD20	.	ENSMUSG00000064696	ProperStrand	89	1	-12.6612
chrX	45742293	45742393	protein_coding	Bcorl1	exon	ENSMUSG00000036959	ProperStrand	36	chr11	68887042	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-5.1266
chr7	29096426	29096490	protein_coding	Timm50	intron	ENSMUSG00000003438	ProperStrand	6	chr4	129105762	129105778	protein_coding	Zbtb8b	exon	ENSMUSG00000048485	NonProperStrand	7	1	-19.6825
chr7	52338699	52338718	protein_coding	Rcn3	exon	ENSMUSG00000019539	ProperStrand	6	chr16	23110886	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.7876
chr6	51414139	51415194	protein_coding	Hnrnpa2b1	exon	ENSMUSG00000004980	ProperStrand	166	chr18	35716684	35716805	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-2.5515
chr6	125072278	125072562	protein_coding	Chd4	exon	ENSMUSG00000063870	ProperStrand	303	chr8	129468785	129468865	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-1.5895
chrX	40944841	40944857	protein_coding	Gm362	exon	ENSMUSG00000078320	ProperStrand	129	chr11	69483136	69483191	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.2610
chr1	181027187	181027205	protein_coding	Smyd3	intron	ENSMUSG00000055067	ProperStrand	231	chr11	68887033	68887060	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-1.7841
chr5	122580412	122584741	protein_coding	Ccdc63	utr5	ENSMUSG00000043036	ProperStrand	120	chr8	34802359	34802416	snoRNA	ENSMUSG00000088856_SNORA48	.	ENSMUSG00000088856	ProperStrand	236	1	-9.1774
chr1	57425979	57425997	lincRNA	4930558J18Rik	intron	ENSMUSG00000084958	NonProperStrand	28	chr11	62416599	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-10.8009
chr12	88778631	88778722	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	chr10	23505594	23505626	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	5	-7.3955
chr11	68814449	68814642	protein_coding	Pfas	exon	ENSMUSG00000020899	ProperStrand	53	chr11	62416625	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-8.8686
chr18	61297089	61297137	protein_coding	Hmgxb3	exon	ENSMUSG00000024622	ProperStrand	25	chr14	29091877	29091893	protein_coding	Erc2	intron	ENSMUSG00000040640	ProperStrand	31	1	-16.3762
chr7	26511015	26511037	protein_coding	Hnrnpul1	exon	ENSMUSG00000040725	ProperStrand	84	chr16	23111732	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.3953
chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	chr10	90432659	90432678	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	1	-5.4562
chr2	90235304	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	82605605	82607386	protein_coding	Lig3	exon	ENSMUSG00000020697	ProperStrand	34	1	-5.5655
chr15	11774099	11774115	protein_coding	Npr3	utr3	ENSMUSG00000022206	ProperStrand	6	chr3	90016664	90016869	protein_coding	Rps27	exon	ENSMUSG00000090733	ProperStrand	40	1	-18.4531
chr7	57041565	57041581	protein_coding	Prmt3	exon	ENSMUSG00000030505	ProperStrand	89	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-6.9551
chr5	97212536	97212594	protein_coding	Fras1	utr3	ENSMUSG00000034687	ProperStrand	5	chr2	146125208	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	1	-16.2277
chr2	165726523	165726565	LTR	MTB_Mm	MaLR	chr2MTB_Mm165726473	ProperStrand	1	chr2	63936035	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-inf
chr6	17415640	17415657	protein_coding	Met	intron	ENSMUSG00000009376	ProperStrand	32	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.8186
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr8	3388354	3388370	protein_coding	A430078G23Rik	exon	ENSMUSG00000074497	ProperStrand	8	1	-11.1491
chr1	104987423	104987440	SINE	B3A	B2	chr1B3A104987318	ProperStrand	1	chr2	57090809	57090826	protein_coding	Gpd2	utr5	ENSMUSG00000026827	ProperStrand	93	1	-inf
chr8	74120075	74120152	protein_coding	Pgls	utr3	ENSMUSG00000031807	NonProperStrand	5	chr8	122048380	122048418	protein_coding	Mbtps1	exon	ENSMUSG00000031835	NonProperStrand	16	1	-19.8777
chr18	34983363	34984413	protein_coding	Kdm3b	exon	ENSMUSG00000038773	ProperStrand	80	chr1	162966816	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	2	-9.2905
chr5	92845060	92845150	protein_coding	Nup54	utr3	ENSMUSG00000034826	ProperStrand	16	chr17	24857721	24857801	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.7325
chr11	120919823	120919913	protein_coding	Sectm1b	intron	ENSMUSG00000039364	NonProperStrand	2	chr4	110591601	110591681	protein_coding	Agbl4	intron	ENSMUSG00000061298	ProperStrand	14	1	-inf
chr19	23215858	23215874	protein_coding	Klf9	utr5	ENSMUSG00000033863	ProperStrand	83	chr7	28258859	28261172	protein_coding	Sertad3	utr5	ENSMUSG00000055200	ProperStrand	2	1	-inf
chr5	124858521	124860103	protein_coding	Sbno1	exon	ENSMUSG00000038095	ProperStrand	134	chr16	23111394	23111474	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-0.8710
chr3	26220145	26220162	LINE	Lx4B	L1	chr3Lx4B26219849	NonProperStrand	13	chr12	106269343	106269440	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	2	-11.6132
chr17	33962567	33966676	protein_coding	Ndufa7	exon	ENSMUSG00000041881	ProperStrand	64	chr5	130300458	130300553	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	16	-24.0519
chr10	92163681	92173974	protein_coding	Nedd1	exon	ENSMUSG00000019988	ProperStrand	7	chr16	23110833	23110871	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-9.3151
chr7	52381972	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	chr19	8963023	8963190	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	15	-0.8742
chr13	59729297	59730300	protein_coding	Naa35	exon	ENSMUSG00000021555	ProperStrand	20	chr1	162968458	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-8.2798
chr17	74898379	74898416	protein_coding	Yipf4	exon	ENSMUSG00000024072	ProperStrand	5	chr16	23110894	23110963	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-7.3377
chr15	99073514	99073614	protein_coding	Mcrs1	utr3	ENSMUSG00000037570	ProperStrand	46	chr16	23110911	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-3.2276
chr2	5705874	5705892	LTR	MTEa	MaLR	chr2MTEa5705572	NonProperStrand	1	chr9	103920506	103920531	protein_coding	Nphp3	exon	ENSMUSG00000032558	ProperStrand	6	1	-inf
chr8	90724319	90724335	protein_coding	Papd5	exon	ENSMUSG00000036779	NonProperStrand	8	chr1	166179175	166179248	protein_coding	Slc19a2	utr5	ENSMUSG00000040918	ProperStrand	22	1	-18.6665
chr16	57391758	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr3	88715213	88715230	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-2.0668
chr14	51427312	51427392	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr2	23034665	23034755	protein_coding	Yme1l1	intron	ENSMUSG00000026775	ProperStrand	20	1	-9.4235
chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	chr5	54389949	54389966	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	1	-6.6967
chr1	183056428	183056449	protein_coding	Nvl	intron	ENSMUSG00000026516	ProperStrand	89	chr1	162965576	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	4	-9.2150
chr5	111112877	111184821	protein_coding	Ep400	exon	ENSMUSG00000029505	ProperStrand	176	chr7	148634767	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	6	-12.6283
chr14	51427121	51427197	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr9	64023723	64023746	snoRNA	ENSMUSG00000064918_SNORD18	.	ENSMUSG00000064918	ProperStrand	370	1	-3.6904
chr13	34020888	34020910	protein_coding	Serpinb6a	intron	ENSMUSG00000060147	ProperStrand	24	chr4	131908355	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-5.1018
chr4	4719876	4719894	protein_coding	Impad1	exon	ENSMUSG00000066324	ProperStrand	23	chr16	23110964	23111009	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.4133
chr11	120145366	120145435	protein_coding	Bahcc1	exon	ENSMUSG00000039741	ProperStrand	118	chr1	162967512	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-2.2842
chr4	149026816	149026832	protein_coding	Pik3cd	exon	ENSMUSG00000039936	ProperStrand	151	chr5	121655099	121655147	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.1223
chr10	105284099	105284189	protein_coding	Ccdc59	exon	ENSMUSG00000019897	ProperStrand	21	chr19	8800355	8800434	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	3	-13.0432
chr1	89377777	89377793	protein_coding	Ngef	exon	ENSMUSG00000026259	NonProperStrand	41	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	3	-13.7516
chr5	143193785	143194466	protein_coding	Slc29a4	exon	ENSMUSG00000050822	ProperStrand	14	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.2008
chr5	100852512	100852593	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr2	63936035	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-1.6483
chr1	88439996	88440053	protein_coding	Pde6d	utr3	ENSMUSG00000026239	ProperStrand	2	chr11	6428035	6428076	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-inf
chr10	20080843	20080859	protein_coding	Fam54a	utr3	ENSMUSG00000019992	ProperStrand	232	chr13	107767102	107767202	protein_coding	Kif2a	exon	ENSMUSG00000021693	ProperStrand	32	1	-11.8711
chr1	129228428	129228518	snoRNA	ENSMUSG00000093146_AC131793.1	.	ENSMUSG00000093146	ProperStrand	119	chr5	74489596	74489676	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-2.5481
chr9	15120245	15120317	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	chr7	29136535	29136625	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	4	-1.5933
chr4	131865852	131865941	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr19	60850280	60850370	snoRNA	ENSMUSG00000065167_Snora19	.	ENSMUSG00000065167	ProperStrand	10	3	-12.2725
chr7	139768026	139768056	protein_coding	Oat	utr5	ENSMUSG00000030934	ProperStrand	5	chr1	9932573	9932626	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-12.8854
chr6	38542696	38542786	protein_coding	Luc7l2	exon	ENSMUSG00000029823	ProperStrand	85	chr3	108357336	108357416	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-3.8808
chr10	76517619	76517664	protein_coding	Col18a1	exon	ENSMUSG00000001435	ProperStrand	287	chr5	115126279	115126337	protein_coding	Gltp	exon	ENSMUSG00000011884	ProperStrand	10	1	-13.8415
chr1	149219500	149219590	LINE	Lx3_Mus	L1	chr1Lx3_Mus149219517	NonProperStrand	1	chr1	149219758	149219838	LTR	BGLII	ERVK	chr1BGLII149219658	NonProperStrand	1	1	-inf
chr17	45704932	45704965	protein_coding	Hsp90ab1	utr3	ENSMUSG00000023944	ProperStrand	1627	chr8	74008400	74008417	protein_coding	Ano8	exon	ENSMUSG00000034863	NonProperStrand	171	1	-4.6857
chr17	67624196	67624212	protein_coding	Ptprm	intron	ENSMUSG00000033278	ProperStrand	20	chr5	116012480	116012533	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	1	-12.3773
chr2	79843543	79843559	protein_coding	Pde1a	intron	ENSMUSG00000059173	NonProperStrand	275	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-1.7945
chr6	148870873	148870895	protein_coding	Fam60a	utr3	ENSMUSG00000039985	ProperStrand	68	chr19	8963086	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	8	-18.1546
chr4	103790671	103790688	protein_coding	Dab1	intron	ENSMUSG00000028519	ProperStrand	19	chr4	141175331	141175353	protein_coding	Slc25a34	utr3	ENSMUSG00000040740	ProperStrand	15	1	-19.0680
chr1	88252847	88252877	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	chr7	52382755	52382807	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	2	-1.7842
chr16	91818789	91818806	protein_coding	Atp5o	intron	ENSMUSG00000022956	ProperStrand	37	chr15	79913288	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.5050
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr18	35716762	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	6	-1.3001
chr8	125626634	125626654	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	chr11	69481335	69481435	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-1.0578
chr11	45723144	45723160	protein_coding	Clint1	utr3	ENSMUSG00000006169	NonProperStrand	273	chr2	22444766	22444824	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-4.8023
chr6	54379743	54379760	lincRNA	9130019P16Rik	exon	ENSMUSG00000073067	ProperStrand	255	chr4	122968595	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-3.5086
chr2	26493413	26494894	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	6	-7.3822
chr6	94776848	94776875	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	chr2	26493366	26493498	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	6	-5.5775
chr9	48707610	48707626	protein_coding	Htr3a	utr3	ENSMUSG00000032269	ProperStrand	1	chr14	33974945	33974965	protein_coding	Wdfy4	intron	ENSMUSG00000051506	NonProperStrand	11	1	-inf
chr15	78605623	78605723	protein_coding	Card10	utr3	ENSMUSG00000033170	ProperStrand	4	chr19	8799030	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	3	-20.0641
chr13	98263451	98263551	lincRNA	Gm11019	intron	ENSMUSG00000078952	ProperStrand	113	chr5	130300517	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.4982
chr19	46442496	46442614	protein_coding	Tmem180	exon	ENSMUSG00000025227	ProperStrand	20	chr9	61265611	61265627	protein_coding	Tle3	utr3	ENSMUSG00000032280	ProperStrand	88	2	-19.5788
chr4	133523748	133523796	protein_coding	Hmgn2	utr5	ENSMUSG00000003038	ProperStrand	20	chr16	23111452	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.0472
chr1	93342189	93345290	protein_coding	Per2	exon	ENSMUSG00000055866	ProperStrand	114	chr2	63936035	63936053	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-6.5862
chr9	59513681	59516403	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr5	130295421	130295511	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	2	-0.8986
chr3	105762591	105762915	protein_coding	Wdr77	exon	ENSMUSG00000000561	ProperStrand	15	chr14	76247711	76247785	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-6.9035
chr1	88252838	88252904	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	chr17	13112491	13112560	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	5	-1.3325
chr14	8726724	8727075	protein_coding	Flnb	exon	ENSMUSG00000025278	ProperStrand	124	chr7	148634770	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-2.6694
chr1	135551470	135551560	protein_coding	Zc3h11a	intron	ENSMUSG00000026464	ProperStrand	102	chr8	129468799	129468879	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-3.4214
chr1	34499775	34500249	protein_coding	Imp4	exon	ENSMUSG00000026127	ProperStrand	5	chr11	69481337	69481417	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-8.1843
chr5	53442680	53442699	protein_coding	Slc34a2	intron	ENSMUSG00000029188	NonProperStrand	3	chr4	125849115	125850713	protein_coding	Thrap3	exon	ENSMUSG00000043962	ProperStrand	84	1	-inf
chr8	74480128	74480185	protein_coding	Zfp961	intron	ENSMUSG00000052446	ProperStrand	35	chr18	35716736	35716761	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-5.3687
chr19	44188363	44188532	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr19	44188464	44188615	snoRNA	ENSMUSG00000077391_SNORA12	.	ENSMUSG00000077391	ProperStrand	506	181	-19.2310
chr4	131908236	131908279	lincRNA	Gm17300	exon	ENSMUSG00000091021	ProperStrand	109	chr7	134123704	134123819	protein_coding	Cdipt	utr3	ENSMUSG00000030682	NonProperStrand	1	1	-inf
chr1	58523681	58523748	protein_coding	Orc2	intron	ENSMUSG00000026037	ProperStrand	20	chr16	23110829	23110919	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.6223
chr4	155125582	155125672	protein_coding	Atad3a	exon	ENSMUSG00000029036	ProperStrand	28	chr3	123210896	123210976	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.3984
chr5	45888598	45889697	protein_coding	Lap3	exon	ENSMUSG00000039682	ProperStrand	87	chr4	131865442	131865508	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	2	-5.6677
chr2	144091716	144091806	snoRNA	ENSMUSG00000077714_Snord17	.	ENSMUSG00000077714	ProperStrand	549	chr6	71832562	71832642	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-1.6321
chr1	51899273	51899292	protein_coding	Myo1b	intron	ENSMUSG00000018417	ProperStrand	31	chr4	133920827	133920845	protein_coding	Extl1	exon	ENSMUSG00000028838	NonProperStrand	7	1	-18.7072
chr10	52605540	52605559	protein_coding	Slc35f1	intron	ENSMUSG00000038602	ProperStrand	4	chr2	158203969	158204069	snoRNA	ENSMUSG00000065840_SNORA71	.	ENSMUSG00000065840	NonProperStrand	1	1	-inf
chr9	65478543	65478633	protein_coding	Rbpms2	utr5	ENSMUSG00000032387	ProperStrand	85	chr19	8963096	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.7161
chr6	69657216	69657233	LTR	IAPEz-int	ERVK	chr6IAPEz-int69657165	NonProperStrand	42	chr16	91227718	91227735	protein_coding	Olig2	utr3	ENSMUSG00000039830	NonProperStrand	78	1	-13.5071
chr11	21619251	21619351	protein_coding	Wdpcp	intron	ENSMUSG00000020319	ProperStrand	9	chr19	8798740	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-8.6202
chr6	113257443	113257501	protein_coding	Brpf1	utr5	ENSMUSG00000001632	ProperStrand	23	chr17	13115659	13115749	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	1	-9.4652
chr18	63109676	63109692	protein_coding	Apcdd1	exon	ENSMUSG00000071847	NonProperStrand	254	chr14	33005095	33005139	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-1.5205
chr4	43505790	43505880	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr8	122059477	122059563	protein_coding	Mbtps1	intron	ENSMUSG00000031835	ProperStrand	81	1	-2.5431
chr4	138732491	138734008	antisense	Gm16287	.	ENSMUSG00000073739	NonProperStrand	7	mmu-miR-6238	1	18	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	1	-14.9671
chr4	43441950	43441967	protein_coding	Fam166b	utr5	ENSMUSG00000042788	NonProperStrand	4	chr19	8798764	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-10.4043
chr2	180583314	180583404	lincRNA	Gm14344	exon	ENSMUSG00000085428	ProperStrand	1	chr2	180583547	180583637	lincRNA	Gm14339	exon	ENSMUSG00000085728	ProperStrand	1	1	-inf
chr15	77597977	77597993	protein_coding	Myh9	exon	ENSMUSG00000022443	ProperStrand	570	chr16	85802546	85802564	protein_coding	Adamts1	exon	ENSMUSG00000022893	ProperStrand	102	1	-7.7478
chr7	149170854	149171340	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	chr14	52829460	52829518	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-6.1605
chr11	60370927	60370943	protein_coding	Alkbh5	utr3	ENSMUSG00000042650	ProperStrand	203	chr11	97643166	97643663	protein_coding	Rpl23	exon	ENSMUSG00000071415	ProperStrand	920	1	-5.4518
chr2	57090809	57090827	protein_coding	Gpd2	utr5	ENSMUSG00000026827	ProperStrand	93	chrX	71517822	71517961	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-5.6830
mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr2	31890248	31890264	protein_coding	Nup214	exon	ENSMUSG00000001855	NonProperStrand	8	1	-10.0060
chr15	71782799	71782965	protein_coding	Col22a1	utr5	ENSMUSG00000079022	ProperStrand	17	chr11	62416620	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-7.6793
chr7	54110515	54110559	protein_coding	Ldha	utr3	ENSMUSG00000063229	ProperStrand	280	chr3	68889149	68889213	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	2	-1.7363
chr10	122002878	122002958	LINE	L1Md_F2	L1	chr10L1Md_F2122002095	ProperStrand	17	chr4	80777547	80777637	LINE	L1Md_F2	L1	chr4L1Md_F280777194	ProperStrand	1	1	-inf
chr4	43505656	43505822	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr4	57868338	57905984	protein_coding	Gm20459	exon	ENSMUSG00000089945	ProperStrand	31	4	-13.9060
chr7	118177433	118177895	protein_coding	Ctr9	exon	ENSMUSG00000005609	ProperStrand	21	chr5	74489640	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-5.8101
chr8	107741554	107741581	protein_coding	Cbfb	utr3	ENSMUSG00000031885	ProperStrand	21	chr19	8799581	8799641	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	3	-inf
chr17	54281931	54282021	LINE	Lx2B	L1	chr17Lx2B54281363	ProperStrand	1	chr17	54282115	54282205	LTR	RMER17A2	ERVK	chr17RMER17A254282082	NonProperStrand	1	1	-inf
chr5	66843069	66843091	protein_coding	Apbb2	exon	ENSMUSG00000029207	ProperStrand	25	chr7	16524110	16524200	snoRNA	ENSMUSG00000080478_Snord23	.	ENSMUSG00000080478	ProperStrand	361	1	-11.4890
chr10	61879385	61879475	protein_coding-noncoding	Hkdc1	utr3	ENSMUSG00000020080	NonProperStrand	1	chr5	90183977	90184067	protein_coding	Adamts3	intron	ENSMUSG00000043635	ProperStrand	8	1	-inf
chr5	28714382	28714402	protein_coding	Rbm33	exon	ENSMUSG00000048271	ProperStrand	78	chr18	35716811	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.7505
chr11	4820972	4820990	protein_coding	Thoc5	intron	ENSMUSG00000034274	ProperStrand	325	chr5	73456240	73456258	protein_coding	Fryl	exon	ENSMUSG00000070733	ProperStrand	173	1	-7.8116
chr8	119098486	119098593	protein_coding	Cdyl2	utr3	ENSMUSG00000031758	ProperStrand	35	chr19	17900101	17900117	snoRNA	ENSMUSG00000089540_snoU13	.	ENSMUSG00000089540	ProperStrand	99	1	-13.3969
chr13	99029224	99029383	protein_coding	Utp15	exon	ENSMUSG00000041747	ProperStrand	19	chr11	95560249	95560268	protein_coding	Gm9796	utr5	ENSMUSG00000045075	ProperStrand	2	2	-inf
chr2	173071277	173071367	protein_coding	Pmepa1	intron	ENSMUSG00000038400	ProperStrand	25	chr16	23110894	23110974	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.2939
chr12	110887828	110887896	snoRNA	ENSMUSG00000084549_SNORD113	.	ENSMUSG00000084549	ProperStrand	196	chr11	69483136	69483263	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-2.5543
chr1	155287309	155287355	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	chr17	35088971	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-1.9096
chr12	86460227	86463740	protein_coding	Dlst	exon	ENSMUSG00000004789	ProperStrand	52	chr8	32260334	32260432	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	2	-8.1082
chr9	78327841	78327890	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr11	77995185	77995252	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	8	-7.6964
chr13	59555121	59555186	protein_coding	Agtpbp1	intron	ENSMUSG00000021557	ProperStrand	35	chr13	96100651	96100694	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	16	-inf
chr5	136451719	136451736	SINE	B3A	B2	chr5B3A136451702	NonProperStrand	23	chr17	45705006	45705061	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	1	-8.6548
chr18	10150974	10151036	snRNA	ENSMUSG00000065941_U1	.	ENSMUSG00000065941	ProperStrand	47	chr3	123210854	123210891	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.4742
chr11	62418045	62418074	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	chr1	39605608	39605696	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	6	-5.9387
chr18	65322732	65322750	protein_coding	Nedd4l	exon	ENSMUSG00000024589	ProperStrand	44	chr7	116663633	116663712	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.0569
chr8	18802281	18802297	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr12	85292848	85292864	protein_coding	2410016O06Rik	exon	ENSMUSG00000046791	ProperStrand	27	1	-10.9824
chr9	82395722	82395739	LINE	Lx4B	L1	chr9Lx4B82394755	ProperStrand	12	chr11	106362304	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-9.0897
chr5	132295469	132295486	protein_coding	Auts2	intron	ENSMUSG00000029673	NonProperStrand	37	chr5	108336363	108336460	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-5.8255
chrX	102994879	102994969	protein_coding	Atrx	utr3	ENSMUSG00000031229	ProperStrand	54	chr4	131865891	131865971	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.9337
chr19	4742572	4744123	protein_coding	Spnb3	exon	ENSMUSG00000067889	ProperStrand	19	chr16	23110960	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7016
chr14	31371942	31372955	protein_coding	Tkt	exon	ENSMUSG00000021957	ProperStrand	160	chr19	8963026	8963068	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-0.8552
chr9	36521394	36522033	protein_coding	Chek1	exon	ENSMUSG00000032113	ProperStrand	3	chr14	76247753	76247843	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-10.4338
chr1	24620839	24620874	protein_coding	Gm10925	utr3	ENSMUSG00000090378	ProperStrand	320	chr8	32260335	32260394	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	3	-4.7665
chr13	9833570	9833659	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr18	75160711	75160751	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	1	-1.3611
chr2	90235299	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	153410349	153410365	protein_coding	Ccdc27	exon	ENSMUSG00000039492	ProperStrand	94	2	-6.1339
chr11	100642571	100642587	protein_coding	Stat5b	utr3	ENSMUSG00000020919	ProperStrand	7	chr17	39985500	39985539	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-10.3222
chr18	42218125	42218141	protein_coding	Sh3rf2	intron	ENSMUSG00000057719	NonProperStrand	3	chr6	124665348	124665422	snoRNA	ENSMUSG00000088835_snoU89	.	ENSMUSG00000088835	ProperStrand	1467	1	-13.2862
chr5	100857088	100857139	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	1	-2.2306
chr3	102972295	102972328	protein_coding	Dennd2c	utr3	ENSMUSG00000007379	ProperStrand	19	chr4	131908689	131908808	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.0948
chr17	6232006	6232022	protein_coding	Tulp4	exon	ENSMUSG00000034377	NonProperStrand	265	chr3	94778659	94778677	protein_coding	Pi4kb	utr5	ENSMUSG00000038861	NonProperStrand	18	1	-12.7795
chr5	54389950	54389967	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	chr18	35714170	35714260	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-1.3522
chr11	20124806	20124843	protein_coding	Rab1	exon	ENSMUSG00000020149	ProperStrand	32	chr18	33954820	33954910	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-7.8069
chr1	180181495	180181585	protein_coding	Pppde1	utr3	ENSMUSG00000026502	ProperStrand	27	chr8	32260343	32260423	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-6.1942
chr2	132136207	132136227	protein_coding	Cds2	utr3	ENSMUSG00000058793	ProperStrand	47	chr1	9932550	9932621	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	3	-18.9731
chr7	117426368	117426458	protein_coding	Swap70	utr3	ENSMUSG00000031015	ProperStrand	47	chr16	23110454	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	6	-16.0564
chr3	153574606	153574654	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	chr7	51505224	51505309	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	9	-18.8908
chr13	55583017	55583339	protein_coding	Dbn1	exon	ENSMUSG00000034675	ProperStrand	43	chr10	23505152	23505278	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	6	-11.4444
chr13	104914357	104919386	protein_coding	Sgtb	exon	ENSMUSG00000042743	ProperStrand	60	chr4	131908715	131908795	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.2237
chr11	78338409	78338426	protein_coding	Tnfaip1	utr3	ENSMUSG00000017615	ProperStrand	30	chr3	123210916	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.2714
chr8	108583546	108583646	protein_coding	Nfatc3	utr5	ENSMUSG00000031902	ProperStrand	75	chr19	8799609	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-6.3251
chr1	173433204	173433294	protein_coding	B930036N10Rik	utr3	ENSMUSG00000091993	ProperStrand	150	chr15	79908974	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	6	-18.8972
chr9	34861987	34862063	protein_coding	St3gal4	intron	ENSMUSG00000032038	ProperStrand	10	chr11	97643026	97643079	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-5.8808
chr12	13226425	13227174	protein_coding	Ddx1	exon	ENSMUSG00000037149	ProperStrand	47	chr16	23110454	23110559	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-7.4518
chr4	106735116	106735142	protein_coding	Mrpl37	intron	ENSMUSG00000028622	ProperStrand	6	chr9	103401280	103401296	protein_coding	Tmem108	exon	ENSMUSG00000042757	NonProperStrand	323	1	-14.7010
chr4	122968584	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	chr14	33005064	33005236	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	13	-4.3154
chr4	131908433	131908451	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr4	57706987	57707003	protein_coding	Palm2	intron	ENSMUSG00000090053	NonProperStrand	187	1	-5.0281
chr2	28615595	28665187	protein_coding	Ak8	exon	ENSMUSG00000026807	NonProperStrand	21	chr1	66521957	66521973	protein_coding	Unc80	intron	ENSMUSG00000055567	NonProperStrand	212	1	-12.9090
chr11	49697095	49697124	protein_coding	Mapk9	utr3	ENSMUSG00000020366	ProperStrand	20	chr1	162967524	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-9.1870
chr5	118636582	118636632	protein_coding	Hrk	utr3	ENSMUSG00000046607	ProperStrand	6	chr7	29690516	29690533	protein_coding	Actn4	intron	ENSMUSG00000054808	NonProperStrand	14	1	-21.9305
chr17	46884450	46884466	protein_coding	Cnpy3	exon	ENSMUSG00000023973	ProperStrand	85	chr5	143648356	143648373	protein_coding	Fbxl18	exon	ENSMUSG00000066640	ProperStrand	64	1	-12.4826
chr1	134401005	134401021	protein_coding	Rbbp5	utr3	ENSMUSG00000026439	NonProperStrand	33	chr7	134166050	134166129	protein_coding	Maz	utr3	ENSMUSG00000030678	ProperStrand	42	1	-15.2252
chr11	62416575	62416605	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr7	150717298	150717424	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	3	-4.6289
chr9	56775853	56775870	protein_coding	Snx33	utr5	ENSMUSG00000032733	NonProperStrand	116	chr11	68886975	68887035	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-2.9334
chr11	106112144	106112264	protein_coding	Ftsj3	exon	ENSMUSG00000020706	ProperStrand	64	chr2	157119950	157120991	protein_coding	Rpn2	exon	ENSMUSG00000027642	ProperStrand	363	1	-9.5776
chr11	69729949	69729966	protein_coding	Gps2	exon	ENSMUSG00000023170	NonProperStrand	1	chr11	97489600	97489617	protein_coding	E130012A19Rik	exon	ENSMUSG00000043439	NonProperStrand	110	1	-inf
chrX	152009278	152009294	protein_coding	Ptchd1	exon	ENSMUSG00000041552	NonProperStrand	294	chr6	71832629	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-2.6448
chr9	82762569	82762649	protein_coding	Phip	utr3	ENSMUSG00000032253	ProperStrand	43	chr4	122968632	122968722	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	8	-inf
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	24449963	24449979	protein_coding	Iqub	intron	ENSMUSG00000046192	ProperStrand	5	1	-9.5409
chr1	162966189	162966244	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	chr9	120037950	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	3	-1.4110
chr9	40611067	40611117	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr19	8799834	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	6	-6.4145
chr6	81992905	81992924	protein_coding	Fam176a	intron	ENSMUSG00000035104	ProperStrand	64	chr10	23505148	23505236	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-2.2339
chr11	97641543	97641577	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	chr12	88778634	88778755	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	9	-17.3199
chr12	77709542	77709628	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	chr1	39605591	39605629	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-3.6088
mmu-miR-6238	1	22	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr4	131908236	131908349	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	11	-7.6569
chr5	115700062	115701087	protein_coding	Rnf10	exon	ENSMUSG00000041740	ProperStrand	95	chr7	116664794	116664874	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.7944
chr7	52777709	52777725	protein_coding	Tulp2	exon	ENSMUSG00000023467	ProperStrand	24	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-7.6694
chr19	10701984	10702278	protein_coding	Ddb1	utr3	ENSMUSG00000024740	ProperStrand	304	chr7	117166757	117166855	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	3	-5.2781
chr9	15119968	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	chr12	106269284	106269384	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	6	-2.2245
chr19	11988947	11994722	protein_coding	Patl1	exon	ENSMUSG00000046139	ProperStrand	49	chr9	120039623	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-6.2603
chr2	35037754	35037786	protein_coding	Rab14	utr3	ENSMUSG00000026878	ProperStrand	21	chr2	32074844	32074900	protein_coding	Prrc2b	exon	ENSMUSG00000039262	ProperStrand	344	1	-11.9409
chrX	130496426	130496668	protein_coding	Sytl4	exon	ENSMUSG00000031255	ProperStrand	169	chr7	67125797	67125831	snoRNA	ENSMUSG00000089375_Snord107	.	ENSMUSG00000089375	ProperStrand	451	1	-7.2091
chr13	99637012	99637112	protein_coding	Tnpo1	exon	ENSMUSG00000009470	ProperStrand	56	chr15	5068411	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-6.2031
chr3	14588600	14588618	protein_coding	E2f5	intron	ENSMUSG00000027552	NonProperStrand	17	chr9	107522088	107522108	protein_coding	Gnai2	exon	ENSMUSG00000032562	ProperStrand	29	1	-17.4290
chr17	42932047	42932096	protein_coding	Cd2ap	utr3	ENSMUSG00000061665	ProperStrand	44	chr10	110918551	110918641	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-4.0267
chr11	120471883	120471923	protein_coding	Pcyt2	utr3	ENSMUSG00000025137	ProperStrand	1	chr7	54443164	54443185	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-inf
chr18	73693166	73693186	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	chr15	98356835	98356913	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	1	-0.8164
chr2	71264795	71264825	protein_coding	Hat1	intron	ENSMUSG00000027018	ProperStrand	53	chr18	35716685	35716761	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-4.2216
chr7	52309977	52309993	protein_coding	Prrg2	exon	ENSMUSG00000007837	NonProperStrand	281	chr14	48162204	48162234	protein_coding	Atg14	utr3	ENSMUSG00000037526	ProperStrand	12	1	-13.5040
chr13	52742450	52742466	protein_coding	Syk	utr3	ENSMUSG00000021457	NonProperStrand	125	chr3	108357258	108357307	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-3.1730
chr5	23761806	23761896	LTR	ORR1A1	MaLR	chr5ORR1A123761740	ProperStrand	1	chr7	116853712	116853792	protein_coding	D930014E17Rik	intron	ENSMUSG00000031023	NonProperStrand	2	1	-inf
chr16	35697358	35697375	protein_coding	Dirc2	utr3	ENSMUSG00000022848	NonProperStrand	6	chr2	63936035	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-12.6127
chr1	69695317	69695397	protein_coding	Ikzf2	intron	ENSMUSG00000025997	ProperStrand	11	chr1	69037513	69037603	protein_coding	Erbb4	intron	ENSMUSG00000062209	ProperStrand	8	1	-19.0255
chr9	102801149	102808403	protein_coding	Ryk	exon	ENSMUSG00000032547	ProperStrand	25	chr4	131908236	131908276	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.8464
chr1	38075735	38075835	protein_coding	Eif5b	exon	ENSMUSG00000026083	ProperStrand	118	chr4	131865951	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.8421
chr17	36047535	36047582	protein_coding	Mrps18b	utr3	ENSMUSG00000024436	ProperStrand	21	chr16	23111754	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.7491
chr5	87245812	87245942	protein_coding	Ythdc1	exon	ENSMUSG00000035851	ProperStrand	45	chr7	29136525	29136599	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.8631
chr3	108714176	108714239	protein_coding	Prpf38b	exon	ENSMUSG00000027881	ProperStrand	23	chr17	10401232	10401248	protein_coding	Qk	utr3	ENSMUSG00000062078	NonProperStrand	790	2	-15.9383
chr5	130285050	130285124	protein_coding	Psph	utr5	ENSMUSG00000029446	ProperStrand	40	chr16	23110828	23110861	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.4886
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr1	162968444	162968497	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-1.9307
chr10	80422547	80422635	protein_coding	Gng7	intron	ENSMUSG00000048240	NonProperStrand	6	chr18	35716836	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-6.6008
chr7	24779190	24779213	SINE	ID_B1	B4	chr7ID_B124779183	NonProperStrand	54	chr5	107303155	107303171	protein_coding	Hfm1	intron	ENSMUSG00000043410	ProperStrand	23	1	-15.4534
chr17	81344133	81344150	protein_coding	Tmem178	exon	ENSMUSG00000024245	ProperStrand	67	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.5997
chr3	127492951	127492967	protein_coding	Tifa	utr5	ENSMUSG00000046688	ProperStrand	15	chr18	35716788	35716827	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.7126
chr1	46132856	46132921	protein_coding	Dnahc7b	intron	ENSMUSG00000041144	NonProperStrand	57	chr11	69483184	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	5	-11.8058
chr13	70771915	70771931	protein_coding	BC018507	intron	ENSMUSG00000034525	ProperStrand	43	chr17	24857727	24857775	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.8722
chr2	158451026	158451043	protein_coding	Actr5	exon	ENSMUSG00000037761	NonProperStrand	94	chr5	147646770	147646850	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	1	-7.0645
chr5	31554603	31554816	protein_coding	Krtcap3	exon	ENSMUSG00000029149	ProperStrand	2	chr6	148183536	148183552	protein_coding	Tmtc1	utr3	ENSMUSG00000030306	NonProperStrand	7	1	-inf
chr3	85477283	85477317	protein_coding	Fam160a1	exon	ENSMUSG00000051000	ProperStrand	8	chr19	8963025	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-10.1244
chr5	121655016	121655107	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	chr12	81492598	81492667	snoRNA	ENSMUSG00000088158_Scarna3b	.	ENSMUSG00000088158	ProperStrand	147	2	-3.8736
chr5	128085216	128085290	protein_coding	Slc15a4	intron	ENSMUSG00000029416	ProperStrand	49	chr16	23111434	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.5489
chr10	5988738	5988818	protein_coding	Akap12	utr3	ENSMUSG00000038587	ProperStrand	1008	chrX	158875769	158875787	protein_coding	Reps2	intron	ENSMUSG00000040855	ProperStrand	1	1	-inf
chr9	58547119	58547136	protein_coding	2410076I21Rik	intron	ENSMUSG00000074269	ProperStrand	91	chr10	23505208	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-0.7221
chr2	90235303	90235348	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr3	30315221	30315239	protein_coding	Mecom	intron	ENSMUSG00000027684	NonProperStrand	23	1	-6.3423
chr1	120578482	120578572	protein_coding	Tfcp2l1	utr3	ENSMUSG00000026380	ProperStrand	158	chr4	131826048	131826128	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	1	-7.2862
chr11	6374930	6374946	protein_coding	Purb	exon	ENSMUSG00000091207	ProperStrand	16	chr9	15119632	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-5.1098
chr9	66305355	66306011	protein_coding	Herc1	exon	ENSMUSG00000038664	ProperStrand	81	chr11	62416575	62416627	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-4.5875
chr10	111423244	111423260	protein_coding	Glipr1	intron	ENSMUSG00000056888	ProperStrand	2	chr4	131908362	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-8.3123
chr17	35281678	35281927	protein_coding	Bag6	exon	ENSMUSG00000024392	ProperStrand	181	chr14	11125608	11125625	protein_coding	Fhit	intron	ENSMUSG00000060579	NonProperStrand	51	1	-11.4262
chr11	113005356	113005373	lincRNA	2610035D17Rik	intron	ENSMUSG00000087259	NonProperStrand	38	chr2	179924267	179924890	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	1	-10.6170
chr11	62416575	62416602	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	1	-5.1572
chr16	23110986	23111010	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr2	25055944	25056237	protein_coding	Cobra1	exon	ENSMUSG00000013465	ProperStrand	17	2	-17.9552
chr15	99070172	99070188	protein_coding	Kcnh3	exon	ENSMUSG00000037579	NonProperStrand	44	chr9	90004968	90009392	protein_coding	Morf4l1	exon	ENSMUSG00000062270	ProperStrand	33	1	-15.1477
chr2	121879612	121879630	protein_coding	Spg11	utr3	ENSMUSG00000033396	ProperStrand	32	chr1	162967491	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.6627
chr5	35237022	35237039	protein_coding	Htt	exon	ENSMUSG00000029104	NonProperStrand	9	chr7	133835253	133835269	protein_coding	Slx1b	exon	ENSMUSG00000059772	ProperStrand	15	1	-19.5214
chr12	109324999	109325089	LTR	MLT1I	MaLR	chr12MLT1I109324976	NonProperStrand	1	chr12	109324418	109324498	Simple_repeat	(CA)n	Simple_repeat	chr12(CA)n109324381	ProperStrand	1	1	-inf
chr18	12172461	12172477	protein_coding	6030446N20Rik	intron	ENSMUSG00000049411	ProperStrand	235	chr8	64017613	64028376	protein_coding	Palld	exon	ENSMUSG00000058056	NonProperStrand	125	1	-9.1043
chr14	80262507	80262523	lincRNA	Gm6999	intron	ENSMUSG00000075495	ProperStrand	265	chr1	136868507	136868534	protein_coding	Ube2t	exon	ENSMUSG00000026429	ProperStrand	12	1	-13.6188
chr13	49777508	49777561	protein_coding	Iars	utr5	ENSMUSG00000037851	ProperStrand	95	chr15	82980086	82980192	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-6.2297
chrX	152009278	152009294	protein_coding	Ptchd1	exon	ENSMUSG00000041552	NonProperStrand	294	chr8	73419657	73419774	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-1.5030
chr14	20621739	20622328	protein_coding	Nid2	exon	ENSMUSG00000021806	ProperStrand	372	chr8	129468746	129468783	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	2	-2.4664
chr11	96325975	96325991	protein_coding	Skap1	utr5	ENSMUSG00000057058	NonProperStrand	7	chr11	6428102	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-7.4403
chr4	116826700	116826766	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	chr14	76372292	76372392	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	1	-2.6920
chr11	33120349	33120429	protein_coding	Ranbp17	intron	ENSMUSG00000040594	ProperStrand	20	chr8	73419656	73419746	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-5.2171
chr7	29136635	29136654	protein_coding	Rps16	intron	ENSMUSG00000037563	ProperStrand	191	chr11	6428088	6428155	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.3047
mmu-miR-1949	0	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr5	73704994	73705055	protein_coding	Ociad1	utr3	ENSMUSG00000029152	ProperStrand	51	1	-8.4746
chr19	10703573	10703640	protein_coding	Ddb1	utr3	ENSMUSG00000024740	ProperStrand	304	chrX	19683228	19683244	protein_coding	Slc9a7	exon	ENSMUSG00000037341	NonProperStrand	136	1	-8.4232
chr11	115133300	115133504	protein_coding	Fdxr	exon	ENSMUSG00000018861	NonProperStrand	6	chr7	117166722	117166850	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-9.5066
mmu-miR-6240	3	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr8	86096149	86096326	protein_coding	Tecr	exon	ENSMUSG00000031708	ProperStrand	100	1	-4.9088
chr11	4970288	4970378	protein_coding	Ewsr1	exon	ENSMUSG00000009079	ProperStrand	248	chr4	122968590	122968670	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	2	-6.0344
chr11	84840715	84840731	protein_coding	Usp32	exon	ENSMUSG00000000804	ProperStrand	45	chr11	120647116	120647165	protein_coding	Gps1	exon	ENSMUSG00000025156	ProperStrand	22	1	-15.9422
chr16	23110986	23111010	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr4	33106166	33106277	protein_coding	Rragd	utr3	ENSMUSG00000028278	ProperStrand	14	3	-inf
chrX	71589885	71589909	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	chr1	162965979	162966044	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	23	-22.9386
chr5	135635277	135635293	protein_coding	Tbl2	exon	ENSMUSG00000005374	NonProperStrand	4	chr19	8963031	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-7.6308
chr1	162966192	162966269	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	chr12	110887828	110887896	snoRNA	ENSMUSG00000084549_SNORD113	.	ENSMUSG00000084549	ProperStrand	196	1	-5.2458
chr9	20721750	20721840	protein_coding	Dnmt1	exon	ENSMUSG00000004099	ProperStrand	91	chr7	150717335	150717415	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-4.6999
chr8	72690774	72691033	protein_coding	Mef2b	exon	ENSMUSG00000079033	ProperStrand	2	chr16	23110986	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	chr4	132394401	132394462	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	1	-4.1050
chr2	132568077	132568098	protein_coding	1110034G24Rik	intron	ENSMUSG00000044991	ProperStrand	4	chr17	35299506	35299599	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	3	-20.9343
chr10	59755273	59756160	protein_coding	Psap	exon	ENSMUSG00000004207	ProperStrand	124	chr11	113513363	113513379	protein_coding	Cog1	exon	ENSMUSG00000018661	NonProperStrand	38	1	-12.7789
chr4	151701657	151704181	protein_coding	Rpl22	exon	ENSMUSG00000028936	ProperStrand	112	chr16	23111437	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-2.0014
chr6	24569549	24569639	protein_coding	Wasl	exon	ENSMUSG00000029684	ProperStrand	25	chr12	110892840	110892906	snoRNA	ENSMUSG00000064621_AF357355	.	ENSMUSG00000064621	ProperStrand	60	1	-15.0975
chr10	107769946	107770060	protein_coding	Pawr	exon	ENSMUSG00000035873	ProperStrand	39	chr1	162967490	162967557	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	4	-13.8107
chr9	67793644	67793744	protein_coding	Vps13c	exon	ENSMUSG00000035284	ProperStrand	69	chr3	108357255	108357307	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-4.2736
chr16	37777391	37777408	protein_coding	Fstl1	exon	ENSMUSG00000022816	ProperStrand	179	chr19	8963024	8963124	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-2.5177
chr4	131908236	131908402	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	chr4	3762227	3762293	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	7	-1.1905
chr17	21089065	21089110	protein_coding	Ppp2r1a	intron	ENSMUSG00000007564	ProperStrand	57	chr1	182664647	182666837	protein_coding	Acbd3	exon	ENSMUSG00000026499	ProperStrand	67	1	-13.1930
chr11	118900007	118900026	protein_coding	Cbx8	exon	ENSMUSG00000025578	ProperStrand	95	chr11	68887042	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-3.2914
chr4	117553703	117553985	protein_coding	B4galt2	exon	ENSMUSG00000028541	ProperStrand	11	chr8	75071970	75071987	protein_coding	Med26	utr5	ENSMUSG00000045248	ProperStrand	45	1	-17.3521
chr2	30929076	30929135	protein_coding	Fnbp1	intron	ENSMUSG00000075415	ProperStrand	53	chr19	8963093	8963183	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.4846
chr7	148333560	148333643	protein_coding	Ptdss2	intron	ENSMUSG00000025495	ProperStrand	29	chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	1	-10.6552
chr11	87417991	87418091	protein_coding	Mtmr4	exon	ENSMUSG00000018401	ProperStrand	14	chr3	82816757	82816774	protein_coding	Fgg	exon	ENSMUSG00000033860	NonProperStrand	321	1	-12.9142
chr8	48266965	48266982	protein_coding	Stox2	utr3	ENSMUSG00000038143	NonProperStrand	10	chr18	35716795	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-9.1880
chr1	33828651	33828669	protein_coding	Zfp451	intron	ENSMUSG00000042197	NonProperStrand	393	chr19	8799581	8799621	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-3.1724
chr19	10702331	10702974	protein_coding	Ddb1	utr3	ENSMUSG00000024740	ProperStrand	304	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-5.7637
chr5	104282888	104282995	protein_coding	Aff1	utr3	ENSMUSG00000029313	ProperStrand	82	chr19	8799847	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-4.3478
chrX	71478671	71479354	protein_coding	Flna	exon	ENSMUSG00000031328	ProperStrand	134	chr1	162966816	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-4.6945
chr11	94491396	94493412	protein_coding	Lrrc59	exon	ENSMUSG00000020869	ProperStrand	115	chr2	64983696	64983716	protein_coding	Cobll1	intron	ENSMUSG00000034903	ProperStrand	3	1	-18.5045
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	137358716	137358733	protein_coding	Emid2	exon	ENSMUSG00000004415	NonProperStrand	38	2	-8.7876
chr5	31546349	31546540	protein_coding	Nrbp1	exon	ENSMUSG00000029148	ProperStrand	10	chr15	79913295	79913354	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-7.1231
chr18	35714256	35714292	lincRNA	Snhg4	intron	ENSMUSG00000090430	ProperStrand	270	chr11	33056990	33059975	protein_coding	Npm1	exon	ENSMUSG00000057113	ProperStrand	352	1	-6.7725
chr16	4713775	4714445	protein_coding	Nmral1	exon	ENSMUSG00000063445	ProperStrand	10	chr16	23109051	23109093	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	2	-17.3807
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr1	178843890	178843910	protein_coding	Sdccag8	intron	ENSMUSG00000026504	NonProperStrand	2	1	-16.3467
chr13	79659338	79659354	LTR	RodERV21-int	ERV1	chr13RodERV21-int79658190	ProperStrand	43	chr11	102339595	102339639	protein_coding	Gpatch8	exon	ENSMUSG00000034621	ProperStrand	49	1	-14.4051
chr2	89368462	89368478	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	chr2	26493366	26493449	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	3	-3.8689
chr8	67881439	67881456	LTR	MTEa-int	MaLR	chr8MTEa-int67880462	ProperStrand	39	chr2	32818171	32818524	protein_coding	Rpl12	exon	ENSMUSG00000038900	ProperStrand	167	1	-12.1282
chr11	78026214	78026346	protein_coding	Supt6h	exon	ENSMUSG00000002052	ProperStrand	119	chr6	94776847	94776872	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	1	-7.7329
chr8	89375800	89375821	protein_coding	N4bp1	intron	ENSMUSG00000031652	ProperStrand	98	chr11	69483190	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	5	-8.7228
chr18	24113579	24113596	protein_coding	Zfp397	intron	ENSMUSG00000024276	ProperStrand	22	chr9	15119647	15119675	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.4840
chr6	17856570	17856588	protein_coding	St7	intron	ENSMUSG00000029534	NonProperStrand	1	chr7	144659644	144659686	protein_coding	Glrx3	utr3	ENSMUSG00000031068	ProperStrand	35	1	-inf
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr10	107800732	107800854	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	3	-9.2953
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	123541402	123541418	protein_coding	Slc6a20b	exon	ENSMUSG00000025243	ProperStrand	16	1	-7.0757
chr10	7493893	7495022	protein_coding	BC013529	exon	ENSMUSG00000040006	NonProperStrand	2	chr8	13876135	13876225	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-14.6016
chr7	13516168	13516196	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr15	4962082	4962098	protein_coding	C7	utr3	ENSMUSG00000079105	ProperStrand	63	1	-8.5687
chr1	30886885	30886985	protein_coding	Phf3	exon	ENSMUSG00000048874	ProperStrand	102	chr3	123210879	123210910	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.2662
chr11	97490373	97490408	protein_coding	E130012A19Rik	exon	ENSMUSG00000043439	ProperStrand	83	chr7	29136545	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-3.3559
chr5	134614687	134614703	protein_coding	Gatsl2	utr3	ENSMUSG00000015944	ProperStrand	8	chr16	23111451	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.8232
chr11	42440243	42440259	protein_coding	Gabrb2	exon	ENSMUSG00000007653	ProperStrand	248	chr5	149861448	149861888	protein_coding	Hmgb1	exon	ENSMUSG00000066551	ProperStrand	99	1	-9.4632
chr1	130245907	130245928	protein_coding	Mcm6	exon	ENSMUSG00000026355	ProperStrand	69	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-7.8999
chrX	5624720	5624744	protein_coding	Nudt11	utr5	ENSMUSG00000073295	ProperStrand	1	chr11	69481333	69481420	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-inf
chr5	145884462	145884522	protein_coding	Arpc1b	exon	ENSMUSG00000029622	ProperStrand	17	chr9	40762540	40762558	protein_coding	4931429I11Rik	intron	ENSMUSG00000032023	NonProperStrand	49	1	-16.3519
chr1	134018692	134018903	protein_coding	Cdk18	exon	ENSMUSG00000026437	ProperStrand	51	chr5	108336363	108336411	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-5.1961
chr18	63238395	63238411	protein_coding	Fam38b	exon	ENSMUSG00000041482	NonProperStrand	50	chr11	69483136	69483228	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.7653
chr17	35793467	35793510	protein_coding	Vars2	utr3	ENSMUSG00000038838	ProperStrand	19	chr16	23110454	23110521	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.5826
chr8	125897950	125905375	protein_coding	Tcf25	exon	ENSMUSG00000001472	ProperStrand	66	chr3	88497864	88497944	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-7.2701
chr17	38290745	38290764	LTR	MurERV4-int	ERVK	chr17MurERV4-int38290059	ProperStrand	21	chr16	91785592	91793863	protein_coding	Itsn1	exon	ENSMUSG00000022957	ProperStrand	172	1	-13.3256
chr2	146125208	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	chr11	5180669	5180685	protein_coding	Znrf3	utr3	ENSMUSG00000041961	NonProperStrand	210	1	-8.5571
chr6	70794801	70794819	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	chr19	8963027	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-1.8065
chr8	77742558	77742574	protein_coding	Rasd2	exon	ENSMUSG00000034472	NonProperStrand	237	chr7	117166721	117166760	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-2.3123
chr10	77464095	77464173	protein_coding	Pfkl	exon	ENSMUSG00000020277	ProperStrand	179	chr8	46648732	46648748	protein_coding	Sorbs2	intron	ENSMUSG00000031626	ProperStrand	50	1	-11.4875
chr18	35403806	35404427	protein_coding	Ctnna1	exon	ENSMUSG00000037815	ProperStrand	115	chr11	87240292	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	2	-15.2913
chr5	121206216	121206251	protein_coding	Oas3	exon	ENSMUSG00000032661	ProperStrand	8	chr5	130295427	130295486	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	2	-14.9559
chr10	62228325	62228361	snoRNA	ENSMUSG00000080469_Snord98	.	ENSMUSG00000080469	ProperStrand	124	chr18	35714144	35714212	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-2.1737
chr17	56716118	56716222	protein_coding-noncoding	Safb2	utr3	ENSMUSG00000042625	ProperStrand	2	chr12	86470806	86471445	protein_coding	Dlst	exon	ENSMUSG00000004789	ProperStrand	52	1	-21.4697
chr11	107181576	107181594	protein_coding	Pitpnc1	intron	ENSMUSG00000040430	ProperStrand	46	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.1947
chr17	28453129	28453823	protein_coding	Fance	utr5	ENSMUSG00000007570	ProperStrand	23	chr10	23505152	23505209	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-4.8598
chr14	87659491	87659512	LTR	MTEa	MaLR	chr14MTEa87659331	NonProperStrand	83	chr2	25421638	25421655	protein_coding	Mamdc4	exon	ENSMUSG00000026941	ProperStrand	11	1	-16.1115
chr1	88423345	88423435	protein_coding	Ptma	utr5	ENSMUSG00000026238	ProperStrand	385	chr2	158182211	158182291	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-1.6928
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr12	112777894	112778024	protein_coding	Eif5	exon	ENSMUSG00000021282	NonProperStrand	2	1	-13.8163
chr9	107481498	107481598	protein_coding	Nat6	utr5	ENSMUSG00000079334	ProperStrand	5	chr2	18508668	18508718	tRNA	tRNA1947-AsnGTT	.	1775957	ProperStrand	179	1	-16.2240
chr19	60845909	60847004	protein_coding	Eif3a	exon	ENSMUSG00000024991	ProperStrand	287	chr8	13471505	13471559	protein_coding	Gas6	exon	ENSMUSG00000031451	ProperStrand	27	1	-11.7908
chr17	35822057	35822257	protein_coding	Ddr1	exon	ENSMUSG00000003534	ProperStrand	129	chr8	32260334	32260424	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	9	-19.4671
chr17	46814992	46815235	protein_coding	Klhdc3	exon	ENSMUSG00000063576	ProperStrand	35	chr10	23505188	23505235	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.0450
chr17	90706035	90706052	protein_coding	Nrxn1	intron	ENSMUSG00000024109	NonProperStrand	22	chr17	24857795	24857847	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.1130
chr11	4982320	4983373	protein_coding	Ewsr1	exon	ENSMUSG00000009079	ProperStrand	248	chr4	131866645	131866675	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	1	-6.2854
chr4	131908231	131908449	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	9	-2.0098
chr16	10088452	10088469	LTR	RMER10B	ERVL	chr16RMER10B10088331	NonProperStrand	14	chr1	162966813	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-9.1944
chr9	96101487	96219708	protein_coding	Tfdp2	intron	ENSMUSG00000032411	ProperStrand	95	chr17	13112450	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	10	-20.3304
chr6	34262004	34262695	protein_coding	Akr1b3	exon	ENSMUSG00000001642	ProperStrand	71	chr7	116664819	116664899	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.2637
chr1	120576560	120576610	protein_coding	Tfcp2l1	utr3	ENSMUSG00000026380	ProperStrand	158	chr10	80714435	80714452	protein_coding	Zfr2	utr3	ENSMUSG00000034949	NonProperStrand	10	1	-15.0302
chr10	116705049	116705065	LINE	Lx8	L1	chr10Lx8116704945	ProperStrand	6	chr5	108336363	108336436	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-9.5743
chr6	91674920	91674949	protein_coding	Slc6a6	exon	ENSMUSG00000030096	ProperStrand	206	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-6.5262
chr18	38096154	38096173	protein_coding-noncoding	Hdac3	utr3	ENSMUSG00000024454	ProperStrand	1	chr7	116663633	116663658	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-inf
chr19	7037310	7037364	protein_coding	Plcb3	exon	ENSMUSG00000024960	ProperStrand	111	chr3	108357255	108357355	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-3.3881
chr6	24684480	24684497	protein_coding	Hyal6	exon	ENSMUSG00000029679	NonProperStrand	114	chr14	33005139	33005225	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	3	-7.2687
chr15	76541224	76541240	protein_coding	Lrrc14	utr5	ENSMUSG00000033728	ProperStrand	52	chr7	52382011	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-6.9963
chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	chr7	4745117	4745142	protein_coding	Rpl28	exon	ENSMUSG00000030432	ProperStrand	220	1	-6.6237
chr6	125082242	125082323	protein_coding	Nop2	exon	ENSMUSG00000038279	ProperStrand	39	chr8	73419657	73419729	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-3.9253
chr8	73420180	73421269	protein_coding	Rpl18a	exon	ENSMUSG00000045128	ProperStrand	394	chr1	88252873	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-3.0531
chr19	47566905	47566951	SINE	RSINE1	B4	chr19RSINE147566886	ProperStrand	1	chr10	5083371	5083434	protein_coding	Syne1	intron	ENSMUSG00000019769	ProperStrand	49	1	-inf
chr5	23825941	23825957	protein_coding	Kcnh2	exon	ENSMUSG00000038319	ProperStrand	242	chr17	24856624	24856680	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-3.7420
chr7	152085973	152086073	protein_coding	Fgf15	utr3	ENSMUSG00000031073	ProperStrand	5	chr12	30544015	30544032	protein_coding	Myt1l	intron	ENSMUSG00000061911	NonProperStrand	19	1	-19.2987
chr11	116466711	116466728	protein_coding	Rhbdf2	exon	ENSMUSG00000020806	ProperStrand	20	chr18	75161533	75161597	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-9.4173
chr18	10052128	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr14	65357464	65361229	protein_coding	Kif13b	exon	ENSMUSG00000060012	ProperStrand	37	1	-9.7738
chr2	90235315	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	64022855	64022920	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	2	-0.9251
chr4	34759277	34763556	protein_coding	Zfp292	exon	ENSMUSG00000039967	ProperStrand	45	chr13	51743567	51743661	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	1	-7.4333
chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	chr9	15118308	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	3	-3.8070
chr19	32589579	32589607	protein_coding	Minpp1	utr3	ENSMUSG00000024896	ProperStrand	23	chr4	87677806	87677822	protein_coding	Mllt3	intron	ENSMUSG00000028496	NonProperStrand	10	1	-18.7819
chr2	22445960	22446022	pseudogene	Gm13339	.	ENSMUSG00000082884	ProperStrand	24	chr15	79908954	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	4	-20.6862
chr12	56592261	56592667	protein_coding	Nfkbia	exon	ENSMUSG00000021025	ProperStrand	11	chr2	4974083	4974167	protein_coding	Optn	exon	ENSMUSG00000026672	ProperStrand	451	1	-12.7377
chr11	20991333	20991350	protein_coding	Peli1	utr5	ENSMUSG00000020134	ProperStrand	69	chr1	162965531	162965570	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.0243
chr17	75045959	75045976	protein_coding	Birc6	exon	ENSMUSG00000024073	NonProperStrand	36	chr19	8963086	8963164	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.1678
chr10	88412381	88412399	protein_coding	Ano4	utr3	ENSMUSG00000035189	ProperStrand	21	chr11	106362640	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-9.5207
chr17	26771372	26771408	protein_coding	Ergic1	exon	ENSMUSG00000001576	ProperStrand	114	chr2	26494797	26494829	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.0088
chr2	119120130	119120146	protein_coding	Vps18	exon	ENSMUSG00000034216	NonProperStrand	40	chr8	95505795	95505812	protein_coding	Slc6a2	exon	ENSMUSG00000055368	NonProperStrand	21	1	-16.2677
chr11	69234364	69234380	protein_coding	Dnahc2	utr3	ENSMUSG00000005237	ProperStrand	95	chr9	115219203	115219289	protein_coding	Stt3b	utr5	ENSMUSG00000032437	ProperStrand	66	1	-12.1986
chr10	75109664	75109767	protein_coding	Cabin1	exon	ENSMUSG00000020196	ProperStrand	62	chr11	69483136	69483188	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.3941
chr3	89184320	89184336	protein_coding	Zbtb7b	exon	ENSMUSG00000028042	ProperStrand	19	chr5	108334195	108334254	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-7.0965
chr3	89895856	89895912	protein_coding	Tpm3	utr3	ENSMUSG00000027940	ProperStrand	55	chr10	90432459	90432476	protein_coding	Anks1b	utr3	ENSMUSG00000058589	ProperStrand	68	1	-13.2344
chr14	64111822	64111845	protein_coding	Tdh	intron	ENSMUSG00000021953	ProperStrand	67	chr11	120148960	120148976	protein_coding	Bahcc1	exon	ENSMUSG00000039741	NonProperStrand	268	1	-10.0912
chr5	125528568	125528668	protein_coding	Ncor2	exon	ENSMUSG00000029478	ProperStrand	377	chr4	32753549	32753577	protein_coding	Mdn1	exon	ENSMUSG00000058006	ProperStrand	184	1	-7.3951
chr6	34846226	34846286	protein_coding	Wdr91	exon	ENSMUSG00000058486	ProperStrand	15	chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	1	-12.3068
chr2	10174739	10174789	protein_coding	Itih5	utr3	ENSMUSG00000025780	ProperStrand	15	chr19	8963081	8963176	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.8348
chr6	140600973	140601002	protein_coding	Aebp2	utr3	ENSMUSG00000030232	ProperStrand	34	chrX	130496426	130496668	protein_coding	Sytl4	exon	ENSMUSG00000031255	ProperStrand	169	1	-12.3824
chr7	52713419	52713483	protein_coding	Ftl1	utr3	ENSMUSG00000050708	ProperStrand	807	chr5	108334243	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	3	-2.2236
chr13	38596620	38598821	protein_coding	Txndc5	exon	ENSMUSG00000038991	ProperStrand	48	chr4	131865894	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-5.8160
chr4	95188182	95188201	LINE	L1MC4	L1	chr4L1MC495188161	ProperStrand	1	chr2	152717956	152719339	protein_coding	Tpx2	exon	ENSMUSG00000027469	ProperStrand	111	1	-inf
chr9	36562451	36566337	protein_coding	Stt3a	exon	ENSMUSG00000032116	ProperStrand	31	chr2	26494714	26494765	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-4.3375
chr2	164630656	164630674	protein_coding	Zswim3	utr5	ENSMUSG00000045822	NonProperStrand	16	chr3	88715213	88715230	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-9.9064
chr17	35272362	35273112	protein_coding	Bag6	utr5	ENSMUSG00000024392	ProperStrand	181	chr17	35089002	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	10	-inf
chr8	108142176	108142262	protein_coding	Fam65a	exon	ENSMUSG00000038604	ProperStrand	19	chr16	23110965	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7016
chr2	29786564	29786580	protein_coding	Odf2	utr3	ENSMUSG00000026790	NonProperStrand	6	chr4	131908265	131908355	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-5.6461
chr10	64050194	64050212	protein_coding	Ctnna3	intron	ENSMUSG00000060843	ProperStrand	66	chr2	26494709	26494762	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-2.9366
chr18	43519767	43519847	protein_coding	Dpysl3	intron	ENSMUSG00000024501	ProperStrand	9	chr18	71898263	71898353	protein_coding	Dcc	intron	ENSMUSG00000060534	NonProperStrand	29	1	-18.5688
chrX	39029535	39029551	protein_coding	Gria3	utr3	ENSMUSG00000001986	ProperStrand	32	chr14	51684839	51684875	tRNA	tRNA704-ThrTGT	.	696717	ProperStrand	30	1	-15.9918
chr2	31924012	31939193	protein_coding	Fam78a	utr3	ENSMUSG00000050592	NonProperStrand	340	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	5	-4.7676
chr16	26743313	26743403	processed_transcript	Gm20319	.	ENSMUSG00000092545	NonProperStrand	1	chr7	54442389	54442469	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	1	-inf
chr10	127521243	127521270	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	chr9	40612077	40612151	snoRNA	ENSMUSG00000075924_Snord14d	.	ENSMUSG00000075924	ProperStrand	131	1	-7.2370
chr15	12047586	12047630	protein_coding	Zfr	utr5	ENSMUSG00000022201	ProperStrand	48	chr3	88497880	88497980	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-7.9059
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr2	130101241	130101302	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-1.0306
chr1	62257331	62257352	protein_coding	Pard3b	intron	ENSMUSG00000052062	NonProperStrand	17	chr1	162965531	162965591	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.6984
chr4	115484059	115484078	protein_coding	Atpaf1	utr3	ENSMUSG00000028710	ProperStrand	202	chr16	90386834	90386852	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	1	-9.7744
chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	chr19	10933138	10933168	protein_coding	Tmem132a	exon	ENSMUSG00000024736	ProperStrand	26	1	-10.8985
chr12	70769556	70769577	protein_coding	Sos2	intron	ENSMUSG00000034801	NonProperStrand	7	chr3	108357359	108357493	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	2	-14.3327
chr15	4059914	4104904	protein_coding	Oxct1	intron	ENSMUSG00000022186	ProperStrand	48	chr4	131865860	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-8.0405
chr1	193443550	193443619	protein_coding	Ints7	exon	ENSMUSG00000037461	ProperStrand	108	chr8	32260349	32260439	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	6	-18.0108
chr14	49278646	49278684	protein_coding	Otx2	exon	ENSMUSG00000021848	ProperStrand	19	chr4	131865390	131865480	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-6.2464
chr12	117557391	117559656	protein_coding	Esyt2	exon	ENSMUSG00000021171	ProperStrand	19	chr2	26494708	26494800	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	7	-20.2827
mmu-miR-6238	3	20	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	1	-5.8467
chr9	108749961	108749980	protein_coding	Celsr3	exon	ENSMUSG00000023473	ProperStrand	31	chr4	131865867	131865944	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.8751
chr18	64661464	64661483	protein_coding	Nars	exon	ENSMUSG00000024587	ProperStrand	97	chr18	35716754	35716828	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-5.9607
chr7	24891879	24891979	protein_coding	Zfp180	utr3	ENSMUSG00000057101	ProperStrand	14	chr7	116664823	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-12.6245
chr16	23111274	23111364	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr16	23111249	23111329	protein_coding	Eif4a2	exon	ENSMUSG00000022884	ProperStrand	356	1	-5.4903
chr4	43505656	43505723	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr7	142887773	142887873	protein_coding	Mki67	exon	ENSMUSG00000031004	ProperStrand	286	1	-0.7208
chr4	86502797	86502847	protein_coding-noncoding	Rps6	utr3	ENSMUSG00000028495	ProperStrand	4	chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	1	-14.1788
chr12	112779247	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	chr11	83107805	83107872	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	1	-1.0030
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr19	53698063	53699439	protein_coding	Smc3	exon	ENSMUSG00000024974	ProperStrand	61	1	-4.9224
chr1	181067485	181067503	protein_coding	Smyd3	intron	ENSMUSG00000055067	NonProperStrand	190	chr11	97642967	97643067	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-1.6193
chr11	108983559	108983649	LINE	L1Md_F2	L1	chr11L1Md_F2108982040	ProperStrand	1	chr7	54443096	54443176	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-inf
chr2	4829164	4829180	protein_coding	Sephs1	utr3	ENSMUSG00000026662	NonProperStrand	271	chr2	26494782	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-0.8028
chr2	145077957	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	chr16	43886794	43886929	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	6	-15.0591
chr6	29119929	29119945	protein_coding	Prrt4	exon	ENSMUSG00000079654	NonProperStrand	18	chr15	34370582	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-5.8762
chr4	43526330	43526362	protein_coding	Car9	utr3	ENSMUSG00000028463	NonProperStrand	35	chr11	68886928	68887018	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-5.1817
chr17	35284123	35284223	protein_coding	Bag6	utr3	ENSMUSG00000024392	ProperStrand	181	chr9	120039534	120039583	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-1.4804
chr8	42295806	42295822	protein_coding	Fgl1	exon	ENSMUSG00000031594	NonProperStrand	2	chr18	74938209	74938246	snoRNA	ENSMUSG00000089235_SCARNA17	.	ENSMUSG00000089235	ProperStrand	1128	1	-14.9189
chr15	59163910	59165194	protein_coding	E430025E21Rik	exon	ENSMUSG00000022350	ProperStrand	18	chr5	130295415	130295505	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-7.6470
chr19	8331058	8331087	protein_coding	Slc22a29	intron	ENSMUSG00000075044	ProperStrand	4	chr10	39978334	39978425	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-11.0867
chr2	4974190	4974207	protein_coding	Optn	exon	ENSMUSG00000026672	ProperStrand	451	chr5	138610641	138610664	protein_coding	Mcm7	exon	ENSMUSG00000029730	ProperStrand	258	1	-6.3745
chr7	117189863	117189926	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr1	162966240	162966268	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	2	-2.2023
chr3	115710535	115710551	protein_coding	Extl2	utr5	ENSMUSG00000027963	NonProperStrand	1	chr17	23955819	23955836	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	1	-inf
chr11	117830203	117830293	protein_coding	Socs3	utr5	ENSMUSG00000053113	ProperStrand	137	chr9	120038626	120038645	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.6627
chr2	158185529	158185666	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr3	123210853	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	34	-7.5062
chr16	26357279	26357295	protein_coding	Cldn1	utr3	ENSMUSG00000022512	NonProperStrand	11	chr8	114061015	114061034	protein_coding	Znrf1	utr5	ENSMUSG00000033545	NonProperStrand	1	1	-inf
chr5	149100499	149100516	protein_coding	Mtus2	exon	ENSMUSG00000029651	ProperStrand	114	chr5	130300420	130300477	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.4854
chr2	132359872	132360439	protein_coding	Gpcpd1	exon	ENSMUSG00000027346	ProperStrand	17	chr4	131865859	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	11	-inf
chr16	71924522	71924538	LINE	Lx7	L1	chr16Lx771923684	ProperStrand	11	chr8	13416896	13416912	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-9.8943
chr3	121154866	121154903	protein_coding	Cnn3	exon	ENSMUSG00000053931	ProperStrand	77	chr4	131908236	131908351	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.0780
chr19	42832334	42832359	protein_coding	Hps1	exon	ENSMUSG00000025188	ProperStrand	13	chr9	15118246	15118318	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-10.5334
chr1	19204672	19204692	protein_coding	Tfap2b	intron	ENSMUSG00000025927	ProperStrand	1	chr11	6428089	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-inf
chr7	135123643	135123732	protein_coding	Fus	exon	ENSMUSG00000030795	ProperStrand	162	chr10	79755218	79755556	protein_coding	Rps15	exon	ENSMUSG00000063457	ProperStrand	119	1	-9.9456
chr5	140212129	140212146	protein_coding	Micall2	utr5	ENSMUSG00000036718	NonProperStrand	18	chr2	118375315	118375377	protein_coding	Bmf	exon	ENSMUSG00000040093	ProperStrand	53	1	-15.9810
chr11	78150285	78150301	protein_coding	Pigs	exon	ENSMUSG00000041958	NonProperStrand	138	chr19	8963062	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.0348
chr8	131254822	131254844	protein_coding	Itgb1	intron	ENSMUSG00000025809	ProperStrand	35	chr7	116664832	116664922	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-3.5143
chr7	147297673	147298376	protein_coding	Echs1	exon	ENSMUSG00000025465	ProperStrand	10	chr16	23110912	23111002	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.7978
chr16	23111301	23111350	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr15	5068442	5068474	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-2.1005
chr7	31928725	31928815	protein_coding	Gramd1a	exon	ENSMUSG00000001248	ProperStrand	24	chrX	34622939	34623019	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-4.9020
chr7	51885281	51885298	protein_coding	Myh14	exon	ENSMUSG00000030739	ProperStrand	29	chr4	131865380	131865434	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-5.4045
chr19	44481960	44482060	protein_coding	Scd1	utr5	ENSMUSG00000037071	ProperStrand	32	chr1	89673696	89673741	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-4.4414
chr12	33661520	33661536	protein_coding	Sypl	utr3	ENSMUSG00000020570	ProperStrand	18	chr1	162967734	162967806	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	1	-12.6920
chr5	124834478	124836841	protein_coding	Sbno1	exon	ENSMUSG00000038095	ProperStrand	134	chr18	35714163	35714216	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-2.0474
chr16	91729702	91729721	protein_coding	Itsn1	utr5	ENSMUSG00000022957	ProperStrand	172	chrX	138158320	138158336	protein_coding	Irs4	exon	ENSMUSG00000054667	ProperStrand	24	1	-13.0541
chr7	150238822	150238880	protein_coding	Cd81	utr5	ENSMUSG00000037706	ProperStrand	88	chr9	103401280	103401296	protein_coding	Tmem108	exon	ENSMUSG00000042757	NonProperStrand	323	1	-9.1720
chr11	77996557	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	11	-1.3599
chr7	63446707	63447247	protein_coding	Herc2	exon	ENSMUSG00000030451	ProperStrand	66	chr16	23110543	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.3006
chr15	81654345	81654435	protein_coding	Tef	utr3	ENSMUSG00000022389	ProperStrand	12	chr9	15118244	15118323	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-6.6107
chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	chr2	130101258	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-2.5895
chr2	34630723	34631075	protein_coding	Hspa5	exon	ENSMUSG00000026864	ProperStrand	181	chr7	134120226	134120280	protein_coding	Cdipt	utr5	ENSMUSG00000030682	ProperStrand	21	1	-13.2279
chr17	87226899	87226954	protein_coding	Epas1	exon	ENSMUSG00000024140	ProperStrand	62	chr9	120039577	120039667	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.2590
chr1	137367405	137367456	protein_coding	Nav1	exon	ENSMUSG00000009418	ProperStrand	38	chr9	120038472	120038519	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-6.5557
chr4	116826700	116826758	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	chr2	130103801	130103818	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	NonProperStrand	1	1	-inf
chr16	30514154	30514171	protein_coding	Tmem44	utr3	ENSMUSG00000022537	ProperStrand	217	chr14	33005095	33005139	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-1.7569
chr7	107782038	107782103	protein_coding	Rab6a	intron	ENSMUSG00000030704	ProperStrand	23	chr5	89383967	89457318	protein_coding	Slc4a4	exon	ENSMUSG00000060961	NonProperStrand	195	1	-12.8914
chr14	76893450	76893469	protein_coding	Tsc22d1	intron	ENSMUSG00000022010	ProperStrand	86	chr16	11144176	11144276	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	1	-9.7372
chr7	129132857	129132957	protein_coding	Gga2	utr3	ENSMUSG00000030872	ProperStrand	65	chr2	145076805	145209256	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-7.5637
chr17	27943849	27943874	protein_coding	D17Wsu92e	intron	ENSMUSG00000056692	ProperStrand	61	chr4	131908361	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-2.6467
chr11	69266815	69267278	protein_coding	Dnahc2	exon	ENSMUSG00000005237	ProperStrand	95	chr9	40865562	40865578	protein_coding	Ubash3b	intron	ENSMUSG00000032020	ProperStrand	42	1	-13.1092
chrX	70282197	70282270	protein_coding	Pnma5	exon	ENSMUSG00000050424	ProperStrand	12	chr4	131866206	131866283	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-11.1133
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr10	8172059	8172078	protein_coding	Ust	intron	ENSMUSG00000047712	ProperStrand	20	1	-10.0139
chr11	3576213	3576739	protein_coding	Morc2a	exon	ENSMUSG00000034543	ProperStrand	62	chr16	56035865	56035918	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	1	-8.8795
chr11	32749660	32749676	LINE	L1MEg1	L1	chr11L1MEg132749553	ProperStrand	1	chr2	130102052	130102102	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-inf
chr11	87240282	87240382	snRNA	ENSMUSG00000070194_U1	.	ENSMUSG00000070194	ProperStrand	191	chr11	55296294	55296332	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-3.9479
chr2	26494799	26494879	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr8	72438578	72438668	protein_coding	Gatad2a	exon	ENSMUSG00000036180	ProperStrand	112	1	-4.9762
chr4	132621140	132621191	protein_coding	Ahdc1	exon	ENSMUSG00000037692	ProperStrand	100	chr10	23770362	23770378	protein_coding	Taar7f	exon	ENSMUSG00000060825	NonProperStrand	40	1	-13.1082
chr1	33828651	33828669	protein_coding	Zfp451	intron	ENSMUSG00000042197	NonProperStrand	393	chr1	93263064	93263081	protein_coding	Fam132b	exon	ENSMUSG00000047443	NonProperStrand	98	1	-8.5661
chr12	85130173	85130190	protein_coding	Papln	exon	ENSMUSG00000021223	ProperStrand	5	chr7	29136525	29136595	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-7.2327
chr12	52462005	52464175	protein_coding	G2e3	exon	ENSMUSG00000035293	ProperStrand	53	chr4	131908689	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-5.9325
chr5	31361443	31361461	protein_coding	Cad	exon	ENSMUSG00000013629	ProperStrand	260	chr10	39978273	39978363	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-2.7225
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr19	8799855	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-1.1616
chr8	34693168	34693184	protein_coding	Tex15	exon	ENSMUSG00000009628	NonProperStrand	31	chr17	23955430	23955475	protein_coding	Srrm2	utr3	ENSMUSG00000039218	ProperStrand	521	1	-10.3184
chr13	94489825	94489844	protein_coding	Dmgdh	intron	ENSMUSG00000042102	NonProperStrand	2	chr3	123210910	123210972	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-9.1566
chr2	160838764	160838824	protein_coding	Chd6	exon	ENSMUSG00000057133	ProperStrand	104	chr4	131908810	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-3.2089
chr15	8104921	8104982	protein_coding	Nup155	exon	ENSMUSG00000022142	ProperStrand	91	chr8	129468796	129468833	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-3.6310
chr11	55300358	55300444	protein_coding	G3bp1	intron	ENSMUSG00000018583	ProperStrand	106	chr3	153574575	153574652	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	1	-8.5348
chr17	80457919	80458008	protein_coding	Hnrpll	intron	ENSMUSG00000024095	ProperStrand	27	chr18	35716689	35716769	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.5820
chr8	125422227	125422283	protein_coding	Ankrd11	intron	ENSMUSG00000035569	ProperStrand	380	chr12	112779195	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	3	-4.4438
chr8	20006101	20006130	pseudogene	2610005L07Rik	.	ENSMUSG00000071793	ProperStrand	40	chr10	23505152	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.8310
chr13	55408343	55408381	protein_coding	Nsd1	exon	ENSMUSG00000021488	ProperStrand	186	chr15	79913288	79913344	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-1.6620
chr19	8799581	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	chr14	33005065	33005228	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	6	-1.1556
chr18	39457890	39457911	protein_coding	Arhgap26	intron	ENSMUSG00000036452	ProperStrand	46	chr19	29722559	29722618	protein_coding	Ermp1	exon	ENSMUSG00000046324	ProperStrand	103	1	-12.7650
chr5	72380683	72380700	protein_coding	Gabrb1	intron	ENSMUSG00000029212	ProperStrand	5	chr10	116499898	116500059	protein_coding	Cct2	exon	ENSMUSG00000034024	ProperStrand	100	1	-17.4839
chr7	119934377	119993781	protein_coding	Tead1	intron	ENSMUSG00000055320	ProperStrand	217	chr7	29136575	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-1.2536
chr14	33153227	33153832	protein_coding	Ogdhl	exon	ENSMUSG00000021913	ProperStrand	182	chr17	34056605	34056659	protein_coding	Tapbp	utr5	ENSMUSG00000024308	ProperStrand	14	1	-14.0522
chr11	9019392	9025642	protein_coding	Upp1	utr5	ENSMUSG00000020407	ProperStrand	73	chr19	53406810	53406826	protein_coding	Mxi1	intron	ENSMUSG00000025025	ProperStrand	51	1	-13.2483
chr14	55099049	55099117	protein_coding	Rem2	utr3	ENSMUSG00000022176	ProperStrand	1	chr1	107744346	107744362	protein_coding	Tnfrsf11a	utr3	ENSMUSG00000026321	ProperStrand	6	1	-inf
chr1	173200741	173200759	protein_coding	B4galt3	utr5	ENSMUSG00000052423	ProperStrand	14	chr10	127496176	127496246	protein_coding	Ptges3	utr5	ENSMUSG00000071072	ProperStrand	89	1	-15.5065
chr17	46811976	46813339	protein_coding	Klhdc3	utr3	ENSMUSG00000063576	ProperStrand	35	chr11	69483146	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	4	-11.5607
chr2	92224532	92224902	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	chr9	15119350	15119425	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-1.3872
chr1	133025402	133025458	protein_coding	Dyrk3	exon	ENSMUSG00000016526	ProperStrand	6	chr7	108440949	108440967	protein_coding	Atg16l2	intron	ENSMUSG00000047767	ProperStrand	121	1	-16.5523
chr12	12944235	12944251	protein_coding	Mycn	exon	ENSMUSG00000037169	NonProperStrand	109	chr4	131865855	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.9361
chr5	89663839	89663855	protein_coding	Slc4a4	exon	ENSMUSG00000060961	NonProperStrand	195	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-2.9926
chr4	135494991	135495007	protein_coding	Fuca1	exon	ENSMUSG00000028673	ProperStrand	16	chr9	15118283	15118356	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-6.0250
chr4	107440276	107440293	lincRNA	Gm12907	intron	ENSMUSG00000087195	NonProperStrand	18	chr2	26494812	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.4011
chr11	51420036	51420216	protein_coding	Hnrnpab	utr5	ENSMUSG00000020358	ProperStrand	124	chr9	110292152	110292190	protein_coding	Ptpn23	exon	ENSMUSG00000036057	ProperStrand	34	1	-13.0034
chr9	43921925	43921942	lincRNA	Gm3906	intron	ENSMUSG00000092003	NonProperStrand	41	chr4	131908362	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-5.5612
chr11	119759963	119759979	protein_coding	Rptor	utr3	ENSMUSG00000025583	ProperStrand	76	chr16	23110527	23110563	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.0679
chr17	27270692	27270785	protein_coding	2900010M23Rik	exon	ENSMUSG00000024208	ProperStrand	13	chr9	15118353	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	6	-inf
chr5	116009814	116010766	protein_coding	Rplp0	utr5	ENSMUSG00000067274	ProperStrand	291	chr17	39985127	39985154	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-2.9504
chr5	92587447	92587468	protein_coding	Uso1	exon	ENSMUSG00000029407	ProperStrand	17	chr18	33954817	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	2	-9.7437
chr1	130228571	130228623	protein_coding	Mcm6	exon	ENSMUSG00000026355	ProperStrand	69	chr1	181027187	181027205	protein_coding	Smyd3	intron	ENSMUSG00000055067	ProperStrand	231	1	-10.3292
chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr16	23111691	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	12	-1.3820
chr10	59757473	59757723	protein_coding	Psap	exon	ENSMUSG00000004207	ProperStrand	124	chr5	130295414	130295481	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	2	-6.5044
chr2	145076804	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	chr4	3762272	3762293	snoRNA	ENSMUSG00000088351_snoU54	.	ENSMUSG00000088351	ProperStrand	405	1	-4.0048
chr9	78023187	78023244	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr17	12919204	12919610	protein_coding	Igf2r	exon	ENSMUSG00000023830	ProperStrand	151	3	-9.9153
chr4	132617330	132617350	protein_coding	Ahdc1	utr5	ENSMUSG00000037692	ProperStrand	100	chr10	39978304	39978404	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-4.4733
chr15	99240092	99240192	protein_coding	Tmbim6	utr3	ENSMUSG00000023010	ProperStrand	64	chr2	5260284	5275750	protein_coding	Camk1d	exon	ENSMUSG00000039145	ProperStrand	50	1	-13.5506
chr15	45130790	45130810	LINE	L1_Mus2	L1	chr15L1_Mus245129537	NonProperStrand	17	chr16	23111386	23111476	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-5.7900
chr11	106860750	106860770	protein_coding	Kpna2	utr5	ENSMUSG00000018362	ProperStrand	70	chr10	61329160	61330213	protein_coding	Col13a1	exon	ENSMUSG00000058806	ProperStrand	120	1	-11.6118
chr5	22970744	23008831	protein_coding	Mll5	exon	ENSMUSG00000029004	ProperStrand	21	chr4	131908236	131908445	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-5.4868
chr5	30453182	30453225	protein_coding	Hadha	exon	ENSMUSG00000025745	ProperStrand	35	chr7	117190019	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	4	-13.9900
chr17	27769279	27771094	protein_coding	Rps10	exon	ENSMUSG00000052146	ProperStrand	94	chr7	52382256	52382285	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-7.3881
chr6	128385837	128386591	protein_coding	Fkbp4	exon	ENSMUSG00000030357	ProperStrand	114	chr17	47346849	47346883	protein_coding	Trerf1	intron	ENSMUSG00000064043	ProperStrand	56	1	-12.1632
chr4	149099127	149099217	protein_coding	Tmem201	utr3	ENSMUSG00000044700	ProperStrand	60	chr10	90581047	90581127	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-4.8072
chr5	121034184	121034205	protein_coding	Tpcn1	intron	ENSMUSG00000032741	NonProperStrand	2	chrX	132673816	132673833	protein_coding	Bex4	intron	ENSMUSG00000047844	NonProperStrand	70	1	-inf
chr5	64203925	64203942	protein_coding	0610040J01Rik	intron	ENSMUSG00000060512	ProperStrand	36	chr2	158182201	158182280	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-6.0033
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr3	84995363	84995380	protein_coding	Arfip1	intron	ENSMUSG00000074513	NonProperStrand	56	1	-9.0651
chr14	34907593	34907918	protein_coding	Anxa8	exon	ENSMUSG00000021950	ProperStrand	26	chr15	89390299	89390381	protein_coding	Shank3	utr3	ENSMUSG00000022623	ProperStrand	19	1	-17.3157
chr3	95555382	95555443	protein_coding	Tars2	intron	ENSMUSG00000028107	ProperStrand	26	chr1	162967536	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-5.0673
chr3	85448965	85456213	protein_coding	Pet112l	exon	ENSMUSG00000028085	ProperStrand	81	chr10	62277208	62277236	protein_coding	Tet1	exon	ENSMUSG00000047146	ProperStrand	286	1	-9.5808
chr18	35716684	35716885	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	chr15	34370542	34370680	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	133	-16.3152
chr14	45905678	45905751	protein_coding	Ero1l	utr3	ENSMUSG00000021831	ProperStrand	18	chr15	98350159	98350249	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-7.1449
chr4	133801679	133801695	lincRNA	E130218I03Rik	exon	ENSMUSG00000086322	NonProperStrand	43	chrX	71589886	71589905	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	1	-10.8202
chr2	25105521	25107254	protein_coding	Ndor1	exon	ENSMUSG00000006471	NonProperStrand	84	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-6.5667
chr1	137150438	137150466	protein_coding	Elf3	utr3	ENSMUSG00000003051	ProperStrand	4	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-6.5415
chr13	9833565	9833686	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr14	25309954	25309978	protein_coding	Rps24	utr5	ENSMUSG00000025290	ProperStrand	110	1	-3.8027
chr4	139482849	139482865	lincRNA	4933427I22Rik	exon	ENSMUSG00000085928	ProperStrand	62	chr11	58971822	58971838	protein_coding	A230051G13Rik	exon	ENSMUSG00000049287	NonProperStrand	1	1	-inf
chr18	33954934	33954954	lincRNA	2410004N09Rik	intron	ENSMUSG00000087590	ProperStrand	15	chr16	22014205	22014298	protein_coding	Senp2	exon	ENSMUSG00000022855	ProperStrand	13	1	-19.6048
chr8	122477154	122477177	protein_coding	Usp10	exon	ENSMUSG00000031826	ProperStrand	98	chr2	167309972	167310063	protein_coding	Spata2	exon	ENSMUSG00000047030	ProperStrand	9	1	-16.1855
chr3	45138767	45138785	lincRNA	2610316D01Rik	intron	ENSMUSG00000086101	NonProperStrand	2	chr4	131865867	131865978	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-inf
chr12	110784762	110784807	lincRNA	Meg3	intron	ENSMUSG00000021268	ProperStrand	61	chr14	31953025	31953118	protein_coding	Stab1	exon	ENSMUSG00000042286	NonProperStrand	127	1	-11.7749
chr11	104027870	104027970	protein_coding	Crhr1	intron	ENSMUSG00000018634	ProperStrand	6	chr16	23110962	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-6.6757
chr14	15572353	15572371	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr1	162968462	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	2	-6.9028
chr4	53873590	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	chr5	108334217	108336485	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-1.1675
chr9	116875139	116875158	protein_coding	Rbms3	intron	ENSMUSG00000039607	NonProperStrand	54	chr4	131865921	131865977	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.9337
chr4	131825994	131826029	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	chr19	8798775	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-1.2709
chr4	86500631	86500689	protein_coding	Rps6	exon	ENSMUSG00000028495	ProperStrand	263	chr4	131669676	131669693	protein_coding	Oprd1	exon	ENSMUSG00000050511	ProperStrand	4	1	-16.0155
chr16	23111372	23111466	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	chr7	86611345	86611379	tRNA	tRNA387-ArgTCG	.	510305	ProperStrand	77	2	-1.8737
chr7	13516163	13516206	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr14	31825967	31826372	protein_coding	Gnl3	exon	ENSMUSG00000042354	ProperStrand	53	1	-8.9153
chr14	70542145	70542235	protein_coding	2610301G19Rik	intron	ENSMUSG00000033712	ProperStrand	49	chr9	120038467	120038547	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-5.8220
chr19	6377016	6377106	protein_coding	Sf1	utr3	ENSMUSG00000024949	ProperStrand	251	chr7	117166760	117166840	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-2.2171
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr13	112278554	112278570	protein_coding	Gpbp1	utr5	ENSMUSG00000032745	ProperStrand	85	2	-6.4213
chr8	71878725	71878805	LINE	L1Md_F	L1	chr8L1Md_F71878691	NonProperStrand	2	chr8	71878557	71878647	LINE	L1VL1	L1	chr8L1VL171878454	NonProperStrand	1	1	-inf
chrX	72376262	72376278	protein_coding	Mpp1	utr5	ENSMUSG00000031402	NonProperStrand	12	chr4	79648833	79648868	pseudogene	Gm11407	.	ENSMUSG00000082179	NonProperStrand	20	1	-18.6218
chr13	109173071	109174974	protein_coding	Depdc1b	exon	ENSMUSG00000021697	ProperStrand	19	chr1	162966812	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-8.5671
chr11	96227432	96227449	protein_coding	Hoxb1	exon	ENSMUSG00000018973	ProperStrand	2	chr17	24857742	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-inf
chr18	57514476	57514499	protein_coding	Prrc1	utr5	ENSMUSG00000024594	NonProperStrand	22	chr10	23505152	23505178	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.8416
chr3	98023350	98023367	LINE	Lx9	L1	chr3Lx998023319	ProperStrand	23	chr16	23111386	23111413	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.7951
chr1	78815410	78815427	protein_coding	Kcne4	utr3	ENSMUSG00000047330	ProperStrand	1	chr1	89673685	89673775	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-inf
chr5	65685056	65685146	protein_coding	Rfc1	exon	ENSMUSG00000029191	ProperStrand	53	chr7	119934404	119934484	protein_coding	Tead1	intron	ENSMUSG00000055320	ProperStrand	217	1	-10.9851
chr11	78086787	78086944	protein_coding	2610507B11Rik	exon	ENSMUSG00000010277	ProperStrand	246	chr5	108336377	108336413	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-2.3066
chr11	115278172	115278237	protein_coding	Atp5h	exon	ENSMUSG00000034566	ProperStrand	11	chr7	29136539	29136629	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-5.5623
chr11	55296241	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	chr6	71832562	71832674	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	10	-7.6678
chr4	107407820	107407837	lincRNA	1700047F07Rik	intron	ENSMUSG00000085549	ProperStrand	7	chr18	77912909	77912938	protein_coding	8030462N17Rik	exon	ENSMUSG00000047466	ProperStrand	17	1	-20.3967
chr2	127036528	127036576	protein_coding	Snrnp200	exon	ENSMUSG00000003660	ProperStrand	203	chr11	109293714	109293791	protein_coding	Amz2	intron	ENSMUSG00000020610	ProperStrand	7	1	-15.2971
chr1	180265973	180266038	protein_coding-noncoding	Hnrnpu	utr3	ENSMUSG00000039630	ProperStrand	12	chr5	77695088	77695134	protein_coding	Rest	intron	ENSMUSG00000029249	ProperStrand	136	5	-inf
chr9	110845661	110845715	protein_coding	Tdgf1	exon	ENSMUSG00000032494	ProperStrand	218	chr16	24984504	24984520	protein_coding	Lpp	utr3	ENSMUSG00000033306	NonProperStrand	189	1	-8.4293
chr3	133010268	133010337	protein_coding	Ppa2	intron	ENSMUSG00000028013	ProperStrand	11	chr5	108336376	108336466	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-8.2822
chr1	74734841	74734857	protein_coding	Ttll4	exon	ENSMUSG00000033257	ProperStrand	24	chr14	76247753	76247843	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-5.9558
chr19	47371744	47371763	protein_coding	Sh3pxd2a	intron	ENSMUSG00000053617	NonProperStrand	22	chr2	26768368	26768433	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-7.6004
chr9	103262263	103266311	protein_coding	Cdv3	exon	ENSMUSG00000032803	ProperStrand	68	chr4	131866155	131866235	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-3.4343
chr3	87902926	87905360	protein_coding	Iqgap3	exon	ENSMUSG00000028068	ProperStrand	16	chr4	131908688	131908722	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.4136
chr7	151027201	151027265	protein_coding	Dhcr7	exon	ENSMUSG00000058454	ProperStrand	30	chr9	15119704	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.8898
chr2	90235304	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr13	96374713	96374729	protein_coding	F2r	exon	ENSMUSG00000048376	NonProperStrand	88	2	-6.3220
chr2	37232847	37232889	protein_coding	Rc3h2	intron	ENSMUSG00000075376	ProperStrand	35	chr4	116827120	116827161	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-8.1186
chr8	127050274	127050291	protein_coding	Cog2	intron	ENSMUSG00000031979	NonProperStrand	4	chr19	8963153	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-7.6308
chr2	90843461	90843486	protein_coding	Celf1	exon	ENSMUSG00000005506	ProperStrand	61	chr1	162968214	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	2	-10.9415
chr12	31972371	31972770	protein_coding	Lamb1	exon	ENSMUSG00000002900	ProperStrand	87	chr18	33954917	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-2.8358
chrX	97442681	97442700	protein_coding	Eda	intron	ENSMUSG00000059327	ProperStrand	8	chr7	116663691	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-10.5415
chr11	102024421	102024511	protein_coding	Lsm12	utr3	ENSMUSG00000020922	ProperStrand	28	chr4	131826045	131826125	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	1	-10.7563
chr7	13511987	13512023	protein_coding	Rps5	utr3	ENSMUSG00000012848	ProperStrand	108	chr8	108406805	108406843	protein_coding	Edc4	intron	ENSMUSG00000036270	ProperStrand	34	1	-13.2775
chr10	127799104	127799204	protein_coding	Cs	utr3	ENSMUSG00000005683	ProperStrand	63	chr14	76247739	76247808	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-4.0798
chr15	98350177	98350284	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	chr10	23506278	23506346	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	4	-1.4012
chr19	9952693	9952853	protein_coding	Incenp	exon	ENSMUSG00000024660	ProperStrand	111	chr3	68889120	68889200	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-2.1875
chr15	4663868	4663885	LINE	L1_Mus4	L1	chr15L1_Mus44663814	ProperStrand	3	chr15	34370619	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-9.7644
chr12	25279396	25279454	protein_coding	Grhl1	intron	ENSMUSG00000020656	ProperStrand	7	chr15	54994185	54994202	protein_coding	Deptor	intron	ENSMUSG00000022419	ProperStrand	17	1	-20.3967
chr12	6344248	6344338	LINE	L1Md_T	L1	chr12L1Md_T6341217	ProperStrand	1	chr16	98284286	98284366	LINE	L1_Mus1	L1	chr16L1_Mus198283327	ProperStrand	23	1	-inf
chr7	39006237	39006294	protein_coding	Plekhf1	utr3	ENSMUSG00000074170	ProperStrand	3	chr16	23111389	23111479	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-6.9982
chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	chr17	35089196	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-1.6078
chr13	54723202	54723218	protein_coding	Faf2	exon	ENSMUSG00000025873	ProperStrand	90	chr2	158185620	158185666	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	1	-5.6882
chr4	125910115	125910205	protein_coding	Mtap7d1	exon	ENSMUSG00000028849	ProperStrand	8	chr11	69481362	69481442	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-7.1653
chr8	108603093	108603183	protein_coding	Nfatc3	exon	ENSMUSG00000031902	ProperStrand	75	chr7	148634713	148634793	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-3.5704
chr11	70463492	70463512	protein_coding	Rnf167	exon	ENSMUSG00000040746	ProperStrand	10	chr4	116827121	116827183	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	3	-21.6377
chr2	147009105	147009122	protein_coding	Nkx2-2	utr3	ENSMUSG00000027434	NonProperStrand	84	chr3	144748059	144749264	protein_coding	Clca5	exon	ENSMUSG00000036960	ProperStrand	86	1	-11.9141
chr7	28523435	28525991	protein_coding	Zfp60	exon	ENSMUSG00000037640	ProperStrand	14	chr16	23110966	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.2008
chr13	8766529	8766619	protein_coding	Adarb2	utr3	ENSMUSG00000052551	NonProperStrand	61	chr11	23267365	23267445	protein_coding	Usp34	exon	ENSMUSG00000056342	ProperStrand	68	1	-13.0275
chr14	85990699	85990718	SINE	B2_Mm1t	B2	chr14B2_Mm1t85990542	ProperStrand	1	chr16	23110827	23110851	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr9	51924252	51924300	protein_coding	Zc3h12c	exon	ENSMUSG00000035164	ProperStrand	3	chr2	26494766	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-15.5516
chr17	4082194	4082284	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr3	153574594	153574653	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	1	-6.3516
chr6	82680899	82681076	protein_coding	Hk2	exon	ENSMUSG00000000628	ProperStrand	88	chr1	172612010	172612026	protein_coding	Olfml2b	exon	ENSMUSG00000038463	ProperStrand	57	1	-12.6465
chr2	28404573	28404590	protein_coding	Ralgds	exon	ENSMUSG00000026821	NonProperStrand	60	chr6	142442678	142444154	protein_coding	Ldhb	exon	ENSMUSG00000030246	ProperStrand	224	1	-10.6717
chr12	104317206	104317223	protein_coding	Unc79	exon	ENSMUSG00000021198	ProperStrand	99	chr11	55296195	55296276	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	7	-inf
chr1	182745764	182745781	antisense	Gm16067	.	ENSMUSG00000073485	ProperStrand	25	chr7	149170855	149171340	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	1	-13.0191
chr16	37384897	37384913	protein_coding	Stxbp5l	utr5	ENSMUSG00000022829	ProperStrand	332	chr1	136525184	136525252	protein_coding	Kdm5b	utr5	ENSMUSG00000042207	ProperStrand	223	1	-7.2659
chr2	90235295	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	108001379	108001395	protein_coding	Glmn	exon	ENSMUSG00000029276	ProperStrand	8	1	-8.5166
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr2	60028963	60028979	protein_coding	Baz2b	intron	ENSMUSG00000026987	NonProperStrand	12	1	-11.0688
chr2	105012751	105012769	protein_coding	Wt1	utr3	ENSMUSG00000016458	NonProperStrand	338	chr4	62918305	62918367	protein_coding	Col27a1	intron	ENSMUSG00000045672	ProperStrand	32	1	-11.1187
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr2	143688806	143688822	protein_coding	Bfsp1	utr5	ENSMUSG00000027420	ProperStrand	4	1	-13.4632
chr11	72582192	72582282	protein_coding	Ankfy1	utr3	ENSMUSG00000020790	ProperStrand	68	chr4	131865891	131865971	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.5775
chr3	95978352	95978413	protein_coding	Sf3b4	exon	ENSMUSG00000068856	ProperStrand	40	chr11	97642952	97643052	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.1871
chr7	31895791	31899711	protein_coding	Hpn	utr5	ENSMUSG00000001249	ProperStrand	126	chr2	84780688	84780732	protein_coding	Slc43a3	intron	ENSMUSG00000027074	ProperStrand	4	1	-17.5811
chr13	52742450	52742466	protein_coding	Syk	utr3	ENSMUSG00000021457	NonProperStrand	125	chr8	73122262	73122294	protein_coding	Ssbp4	intron	ENSMUSG00000070003	ProperStrand	39	1	-12.7074
chr9	108417202	108417359	protein_coding	Qars	exon	ENSMUSG00000032604	ProperStrand	16	chr9	15118337	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-9.8716
chr5	100855903	100855942	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr8	28146998	28147049	protein_coding	Erlin2	exon	ENSMUSG00000031483	ProperStrand	14	2	-15.2637
chr9	30958498	30959462	protein_coding	Aplp2	exon	ENSMUSG00000031996	ProperStrand	172	chr2	26768411	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-3.5937
chr2	102926980	102926997	protein_coding	Apip	intron	ENSMUSG00000010911	NonProperStrand	26	chr16	23110966	23110998	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.2392
chr14	52829477	52829567	lincRNA	Gm16682	intron	ENSMUSG00000085736	ProperStrand	6	chr16	11144150	11144231	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	1	-15.2045
chr2	25077871	25077898	protein_coding	Tubb4b	exon	ENSMUSG00000036752	ProperStrand	58	chr5	3961657	3961673	protein_coding	Akap9	exon	ENSMUSG00000040407	ProperStrand	28	1	-14.9188
chr7	107071599	107072107	protein_coding	Rnf169	utr3	ENSMUSG00000058761	ProperStrand	31	chr16	23110941	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.0160
chr7	30041846	30043496	protein_coding	Spint2	exon	ENSMUSG00000074227	ProperStrand	82	chr13	51743654	51743703	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	2	-10.1187
chr17	4082123	4082162	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr4	82114659	82114675	protein_coding	Nfib	intron	ENSMUSG00000008575	ProperStrand	50	1	-10.3321
chr6	37298371	37298388	protein_coding	Creb3l2	intron	ENSMUSG00000038648	ProperStrand	4	chr17	39985190	39985251	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	2	-18.7391
chr9	40610532	40610614	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr1	162966824	162966860	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-1.5694
mmu-miR-1912-5p	0	17	miRNA	mmu-miR-1912-5p	.	mmu-miR-1912-5p	NonProperStrand	36	chr1	72871242	72871342	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	3	-20.8835
chr4	155550929	155551128	protein_coding	Agrn	exon	ENSMUSG00000041936	ProperStrand	175	chr5	130300534	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-1.8293
chr2	153242537	153242570	protein_coding	8430427H17Rik	exon	ENSMUSG00000061411	ProperStrand	19	chr19	8963087	8963165	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	7	-inf
chr16	10232771	10232851	protein_coding	Atf7ip2	intron	ENSMUSG00000039200	ProperStrand	9	chr3	68889085	68889175	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-6.9792
chr17	46814084	46814100	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr11	55296276	55296325	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-2.3754
chr1	96674992	96675082	LTR	MTC	MaLR	chr1MTC96674957	NonProperStrand	1	chr1	96674864	96674954	SINE	B3	B2	chr1B396674841	ProperStrand	1	1	-inf
chr19	6984448	6984464	protein_coding	Prdx5	utr5	ENSMUSG00000024953	ProperStrand	24	chr7	134336182	134336272	protein_coding	Cd2bp2	utr3	ENSMUSG00000042502	ProperStrand	73	1	-14.7718
chr15	72926971	72926992	antisense	Eif2c2	.	ENSMUSG00000093631	ProperStrand	28	chr3	123210854	123210986	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-8.5836
chr10	79373523	79373581	protein_coding	C030046I01Rik	utr3	ENSMUSG00000035781	ProperStrand	14	chr8	73419657	73419737	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	5	-inf
chr1	71675859	71675880	protein_coding	Fn1	intron	ENSMUSG00000026193	NonProperStrand	10	chr19	8963052	8963152	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.6521
chr5	112758435	112758451	protein_coding	Tfip11	exon	ENSMUSG00000029345	ProperStrand	111	chr15	79913296	79913352	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.4954
chr5	141156830	141156846	protein_coding	Iqce	exon	ENSMUSG00000036555	NonProperStrand	2	chr5	14252800	14252816	protein_coding	Sema3e	utr3	ENSMUSG00000063531	ProperStrand	125	1	-18.7773
chr5	35254252	35254343	protein_coding	Htt	utr3	ENSMUSG00000029104	ProperStrand	73	chr9	15120987	15121020	snoRNA	ENSMUSG00000065265_SNORA32	.	ENSMUSG00000065265	ProperStrand	101	1	-11.8731
chr1	89105750	89105766	protein_coding	Chrng	exon	ENSMUSG00000026253	NonProperStrand	130	chr19	47347736	47347765	protein_coding	Sh3pxd2a	exon	ENSMUSG00000053617	ProperStrand	57	1	-11.8634
chr6	113018736	113018804	non_coding	Gt(ROSA)26Sor	.	ENSMUSG00000086429	ProperStrand	4	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-7.7378
chr8	109954302	109954392	LTR	RLTR14-int	ERV1	chr8RLTR14-int109954310	NonProperStrand	1	chr8	37737191	37737281	protein_coding	Dlc1	intron	ENSMUSG00000031523	ProperStrand	89	1	-inf
chr4	41260433	41261545	protein_coding	Dcaf12	exon	ENSMUSG00000028436	ProperStrand	33	chr16	56035869	56035949	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	1	-10.1500
chr2	180645942	180645986	protein_coding	Ythdf1	exon	ENSMUSG00000038848	ProperStrand	59	chr1	89673597	89673687	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-3.2939
chr13	99086783	99086799	protein_coding	Btf3	utr5	ENSMUSG00000021660	ProperStrand	64	chr16	23110526	23110557	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.3523
chr7	17096578	17096633	protein_coding	Grlf1	exon	ENSMUSG00000058230	ProperStrand	38	chr3	68889087	68889187	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-4.1061
chr11	61285212	61285292	LINE	L1MDa	L1	chr11L1MDa61285036	ProperStrand	1	chr11	61285647	61285737	LINE	L1MDa	L1	chr11L1MDa61285532	ProperStrand	1	1	-inf
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr11	69481335	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-2.9427
chr16	91639685	91641535	protein_coding	Gart	exon	ENSMUSG00000022962	ProperStrand	200	chr2	26493404	26493484	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-1.6755
chr5	86525561	86525577	protein_coding	Stap1	exon	ENSMUSG00000029254	ProperStrand	5	chr7	19591413	19591429	protein_coding	Irf2bp1	exon	ENSMUSG00000044030	NonProperStrand	81	1	-17.7110
chr1	183758902	183758992	protein_coding	Lbr	exon	ENSMUSG00000004880	ProperStrand	97	chr14	66184188	66184268	protein_coding	Elp3	exon	ENSMUSG00000022031	ProperStrand	71	1	-12.0102
chr7	52382192	52382292	protein_coding-noncoding	Rpl13a	utr3	ENSMUSG00000074129	ProperStrand	106	chr1	162966000	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-2.5846
chr9	36558793	36558814	protein_coding	Stt3a	exon	ENSMUSG00000032116	ProperStrand	31	chr7	148634765	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	2	-8.6600
chr18	62149501	62149517	protein_coding	Sh3tc2	exon	ENSMUSG00000045629	ProperStrand	471	chr5	108334195	108334275	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-1.2639
chr8	37633429	37634390	protein_coding	Dlc1	exon	ENSMUSG00000031523	ProperStrand	89	chr3	123210854	123210894	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.4585
chr9	15232367	15232457	LINE	L1VL2	L1	chr9L1VL215232257	NonProperStrand	1	chr9	119536424	119536504	protein_coding	Scn10a	intron	ENSMUSG00000034533	ProperStrand	37	1	-inf
chr4	117075786	117075804	protein_coding	Rnf220	intron	ENSMUSG00000028677	ProperStrand	131	chr3	123210902	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-1.8790
chr11	70823903	70823919	protein_coding	Derl2	exon	ENSMUSG00000018442	NonProperStrand	5	chr11	6428108	6428156	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-8.1751
chr6	83318070	83318086	protein_coding	Tet3	exon	ENSMUSG00000034832	NonProperStrand	93	chr17	39985356	39985422	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-5.0770
chr11	5180669	5180685	protein_coding	Znrf3	utr3	ENSMUSG00000041961	NonProperStrand	210	chr5	121655105	121655156	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-1.6062
chr4	99577397	99577413	protein_coding	Itgb3bp	intron	ENSMUSG00000028549	ProperStrand	55	chr3	123210893	123210985	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.2092
chrX	35526287	35526310	LTR	RLTR19-int	ERVK	chrXRLTR19-int35526259	NonProperStrand	1	chr2	112591053	112591930	protein_coding	Ryr3	exon	ENSMUSG00000057378	NonProperStrand	24	1	-inf
chrX	45557201	45557301	protein_coding	Zdhhc9	intron	ENSMUSG00000036985	ProperStrand	32	chr1	162965982	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	12	-24.1033
chr3	117974082	117974102	LINE	Lx4B	L1	chr3Lx4B117973354	ProperStrand	1	chr5	37503922	37504055	protein_coding	Jakmip1	intron	ENSMUSG00000063646	ProperStrand	21	1	-inf
chr1	170088525	170088585	protein_coding	Pbx1	utr3	ENSMUSG00000052534	ProperStrand	13	chr4	131865381	131865471	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-7.0177
chr19	32832264	32832329	protein_coding	Pten	utr5	ENSMUSG00000013663	ProperStrand	20	chr3	68889026	68889126	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-5.3533
chr5	136707644	136707662	protein_coding	Sh2b2	exon	ENSMUSG00000005057	NonProperStrand	101	chr2	24915691	24915707	protein_coding	Nelf	exon	ENSMUSG00000006476	ProperStrand	40	1	-13.0875
chr7	150717295	150717318	protein_coding	Nap1l4	intron	ENSMUSG00000059119	ProperStrand	31	chr7	150717367	150717425	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-6.8134
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	mmu-miR-1949	0	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	4	-2.7290
chr9	78053793	78053850	protein_coding	Gsta4	exon	ENSMUSG00000032348	ProperStrand	82	chr15	82725599	82725637	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	4	-inf
chr6	25272074	25272091	LTR	MYSERV-int	ERVK	chr6MYSERV-int25271998	ProperStrand	12	chr1	162965531	162965550	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-10.4811
chr12	88778631	88778723	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	chr15	98356797	98356907	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	2	-2.7412
chr17	82900069	82900086	SINE	B1F1	Alu	chr17B1F182900030	ProperStrand	1	chr8	32260352	32260426	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-inf
chr8	73440382	73440438	protein_coding	Mtap1s	exon	ENSMUSG00000019261	ProperStrand	60	chr1	162967506	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-3.4744
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr4	88922162	88922179	protein_coding	Cdkn2a	intron	ENSMUSG00000044303	ProperStrand	13	1	-8.9859
chr10	75967131	75967148	protein_coding	Mcm3ap	exon	ENSMUSG00000001150	ProperStrand	95	chr9	56775853	56775870	protein_coding	Snx33	utr5	ENSMUSG00000032733	NonProperStrand	116	1	-11.0657
chr5	115255306	115255375	protein_coding	Ankrd13a	utr3	ENSMUSG00000041870	ProperStrand	22	chr1	162965555	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.1855
chrX	12864353	12864404	protein_coding	Ddx3x	exon	ENSMUSG00000000787	ProperStrand	67	chr9	64023245	64023330	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	1	-8.2244
chr16	59554971	59554988	protein_coding	Crybg3	exon	ENSMUSG00000022723	NonProperStrand	3	chr3	101385069	101385123	protein_coding	Atp1a1	exon	ENSMUSG00000033161	ProperStrand	316	1	-16.4135
chr11	98939989	98940006	protein_coding	Tns4	exon	ENSMUSG00000017607	NonProperStrand	4	chr1	89673731	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-8.7610
chr7	151765212	151765228	antisense	Gm10574	.	ENSMUSG00000073778	ProperStrand	357	chr2	22444485	22444512	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-4.2920
chr1	9727097	9727114	protein_coding	Vcpip1	exon	ENSMUSG00000045210	NonProperStrand	4	chr9	120038565	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	4	-inf
chr11	4081482	4081498	protein_coding	Sf3a1	utr3	ENSMUSG00000002129	ProperStrand	78	chr10	23505152	23505279	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-1.8081
chr17	6138911	6138928	protein_coding	Tulp4	exon	ENSMUSG00000034377	ProperStrand	164	chr9	120038548	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.3985
chrX	34622667	34624035	protein_coding	Rpl39	intron	ENSMUSG00000079641	ProperStrand	37	chr16	23110902	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-4.0730
chr9	65049531	65049558	snRNA	ENSMUSG00000075930_U5	.	ENSMUSG00000075930	ProperStrand	175	chr2	26494708	26494800	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-1.3605
chr4	85016349	85016365	protein_coding	Sh3gl2	intron	ENSMUSG00000028488	NonProperStrand	313	chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	1	-8.3799
chr7	13614759	13615316	protein_coding	Trim28	exon	ENSMUSG00000005566	ProperStrand	296	chr10	110918546	110918656	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-1.8382
chr7	87883752	87883899	protein_coding	Iqgap1	exon	ENSMUSG00000030536	ProperStrand	43	chr1	162966819	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	3	-15.7339
chr11	83574500	83578461	protein_coding	Heatr6	exon	ENSMUSG00000000976	ProperStrand	67	chr7	140901100	140901190	protein_coding	Bccip	exon	ENSMUSG00000030983	ProperStrand	19	1	-15.4077
chrX	131120637	131120661	protein_coding	Rpl36a	exon	ENSMUSG00000079435	ProperStrand	53	chr10	23505152	23505255	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-4.2032
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr15	79908930	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	4	-2.5940
mmu-miR-2137	2	19	miRNA	mmu-miR-2137	.	mmu-miR-2137	ProperStrand	144	chr3	68889026	68889126	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-1.7720
chr15	59181854	59192691	protein_coding	E430025E21Rik	exon	ENSMUSG00000022350	ProperStrand	18	chr10	23505152	23505279	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	6	-18.1094
chr11	80290696	80290713	protein_coding	Cdk5r1	utr5	ENSMUSG00000048895	NonProperStrand	5	chr16	23111760	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-6.6731
chr4	140723745	140723761	protein_coding	Fbxo42	exon	ENSMUSG00000028920	ProperStrand	91	chr6	70794803	70794819	protein_coding	Eif2ak3	exon	ENSMUSG00000031668	NonProperStrand	154	1	-10.5847
chr19	44117595	44117614	protein_coding	Erlin1	intron	ENSMUSG00000025198	ProperStrand	9	chr4	125995051	125995103	protein_coding	Adprhl2	exon	ENSMUSG00000042558	ProperStrand	3	1	-inf
chr13	96374713	96374729	protein_coding	F2r	exon	ENSMUSG00000048376	NonProperStrand	88	chr10	80850178	80850222	protein_coding	Dohh	exon	ENSMUSG00000078440	ProperStrand	26	1	-14.2354
chr10	101837079	101837097	protein_coding	Mgat4c	utr5	ENSMUSG00000019888	ProperStrand	8	chrX	99380350	99380382	protein_coding	Rps4x	utr3	ENSMUSG00000031320	ProperStrand	139	1	-15.7143
chr2	25090695	25090712	protein_coding	Gm757	utr3	ENSMUSG00000089953	ProperStrand	2	chr19	8963027	8963084	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-inf
chr19	8814588	8814634	protein_coding	Wdr74	exon	ENSMUSG00000042729	ProperStrand	15	chr10	23505152	23505211	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.5481
chr5	108698391	108698432	protein_coding	Dr1	utr5	ENSMUSG00000029265	ProperStrand	11	chr17	24857721	24857811	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	5	-19.5636
chr3	35833437	35833455	protein_coding	Dcun1d1	intron	ENSMUSG00000027708	ProperStrand	14	chr7	52382234	52382315	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-11.2399
chr18	75680824	75680840	lincRNA	Gm10532	exon	ENSMUSG00000073534	ProperStrand	1	chr4	108686213	108686285	protein_coding	Nrd1	exon	ENSMUSG00000053510	ProperStrand	76	1	-inf
chr7	112579294	112579312	protein_coding	Cckbr	intron	ENSMUSG00000030898	ProperStrand	2	chrX	49668049	49668075	protein_coding	Gpc3	exon	ENSMUSG00000055653	ProperStrand	43	1	-inf
chr12	111932236	111932308	protein_coding	Hsp90aa1	exon	ENSMUSG00000021270	ProperStrand	751	chr19	8799047	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-1.3429
chr10	59475273	59476363	protein_coding	Ascc1	exon	ENSMUSG00000044475	ProperStrand	18	chr9	15118346	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-9.5020
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr5	42212424	42212524	protein_coding	Bod1l	exon	ENSMUSG00000061755	ProperStrand	43	1	-10.0399
chr3	53707714	53707732	LINE	Lx9	L1	chr3Lx953707613	NonProperStrand	1	chr7	118219591	118219622	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-inf
chr9	59523498	59525908	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr4	53873608	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	1	-3.0937
chr9	22054765	22054845	protein_coding	Zfp599	exon	ENSMUSG00000062794	ProperStrand	3	chr11	55296220	55296310	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-12.5197
chr4	120655714	120655730	protein_coding	Smap2	exon	ENSMUSG00000032870	ProperStrand	13	chr18	74938044	74938153	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	ProperStrand	1022	3	-inf
chr1	163180574	163180664	protein_coding-noncoding	Prdx6	utr3	ENSMUSG00000026701	ProperStrand	1	chr16	23110911	23110991	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr4	133164547	133164592	protein_coding	Zdhhc18	utr3	ENSMUSG00000037553	ProperStrand	51	chr9	49293430	49293447	protein_coding	Ttc12	intron	ENSMUSG00000040219	NonProperStrand	3	1	-inf
chr12	111852614	111852636	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	1	-2.5283
chr15	36526393	36527981	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr10	80640876	80644137	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	9	-15.6339
chr5	129108591	129108691	protein_coding	Fzd10	exon	ENSMUSG00000081683	ProperStrand	5	chr16	23111779	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-6.6731
chr7	31227324	31227518	protein_coding	Aplp1	exon	ENSMUSG00000006651	ProperStrand	29	chr3	84032927	84032966	tRNA	tRNA878-GlyGCC	.	229342	ProperStrand	3	1	-inf
chr2	52716984	52717003	protein_coding	Fmnl2	utr5	ENSMUSG00000036053	NonProperStrand	4	chr11	97643034	97643057	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-7.8635
mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr16	91616805	91616821	protein_coding	Dnajc28	exon	ENSMUSG00000039763	ProperStrand	9	1	-9.7556
chr2	26493424	26493514	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr7	149562543	149562623	protein_coding	Ctsd	exon	ENSMUSG00000007891	ProperStrand	60	1	-6.1946
chr6	137699113	137699147	protein_coding	Strap	utr3	ENSMUSG00000030224	ProperStrand	27	chr7	116663689	116663767	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.9611
chr17	23955820	23955839	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	chr10	110918575	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	3	-5.2119
chr12	55797793	55797834	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	chr1	162968442	162968510	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-1.1302
chr10	117172210	117172226	protein_coding	Slc35e3	utr3	ENSMUSG00000060181	ProperStrand	11	chr3	68889206	68889253	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-6.5623
chr11	6520792	6520823	protein_coding	Tbrg4	exon	ENSMUSG00000000384	ProperStrand	24	chr9	62645434	62645526	protein_coding	Fem1b	exon	ENSMUSG00000032244	ProperStrand	111	3	-20.4999
chr11	73051616	73051636	protein_coding	Trpv1	intron	ENSMUSG00000005952	ProperStrand	4	chr9	50816824	50816841	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	1	-17.5987
chr9	20713675	20722935	protein_coding	Dnmt1	exon	ENSMUSG00000004099	ProperStrand	91	chr4	131908236	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	6	-7.4270
chr14	20621744	20625091	protein_coding	Nid2	exon	ENSMUSG00000021806	ProperStrand	372	chr15	79908932	79909021	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	2	-3.8117
chr11	106362304	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	chr1	89673597	89673786	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	14	-1.0867
chr17	39985562	39985662	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr4	79650140	79650160	pseudogene	Gm11410	.	ENSMUSG00000083219	ProperStrand	47	1	-6.4144
chr5	143733950	143734006	protein_coding	Fscn1	utr3	ENSMUSG00000029581	ProperStrand	200	chr5	147646407	147646477	snoRNA	ENSMUSG00000077185_SNORD102	.	ENSMUSG00000077185	ProperStrand	142	1	-9.1713
chr6	128244638	128244708	protein_coding	Tead4	intron	ENSMUSG00000030353	ProperStrand	14	chr10	90581049	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-7.7067
chr9	120038467	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	10	-0.8313
chrX	54644624	54644661	snoRNA	ENSMUSG00000065110_Snord61	.	ENSMUSG00000065110	ProperStrand	40	chr17	24857788	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.0012
chr10	84426052	84426069	protein_coding	Ric8b	intron	ENSMUSG00000035620	NonProperStrand	14	chr16	23111757	23111811	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.5328
chr2	90235294	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	74980088	74980104	protein_coding	Hic1	exon	ENSMUSG00000043099	NonProperStrand	8	1	-8.5166
chr3	104598025	104598080	protein_coding	Mov10	utr3	ENSMUSG00000002227	ProperStrand	96	chr2	118448818	118448854	protein_coding	Bub1b	exon	ENSMUSG00000040084	ProperStrand	45	1	-12.9499
chr2	162910126	162910151	protein_coding	Mybl2	utr3	ENSMUSG00000017861	ProperStrand	230	chr19	12543642	12543659	protein_coding	Dtx4	utr3	ENSMUSG00000039982	ProperStrand	4	1	-16.2567
chr9	45525530	45525546	protein_coding	Dscaml1	exon	ENSMUSG00000032087	ProperStrand	23	chr19	8963086	8963183	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-4.0031
chr18	76297633	76297649	protein_coding	Zbtb7c	exon	ENSMUSG00000044646	ProperStrand	64	chr18	73693117	73693147	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-5.3980
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr17	35299510	35299630	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-0.8568
chr2	168581160	168581250	protein_coding	Sall4	exon	ENSMUSG00000027547	ProperStrand	82	chr8	98270015	98270095	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-4.9345
chr1	127332183	127332201	Low_complexity	C-rich	Low_complexity	chr1C-rich127332120	NonProperStrand	6	chr1	102076759	102076790	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	1	-14.1894
chr15	51630742	51630842	protein_coding	Eif3h	exon	ENSMUSG00000022312	ProperStrand	45	chr15	5068442	5068480	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-6.6364
chr15	103072504	103072556	protein_coding	Hnrnpa1	intron	ENSMUSG00000046434	ProperStrand	68	chr3	108357255	108357345	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	2	-7.1828
chrX	70282275	70282295	protein_coding	Pnma5	exon	ENSMUSG00000050424	ProperStrand	12	chr16	23111697	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-8.1126
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr11	121455574	121455606	protein_coding	Tbcd	exon	ENSMUSG00000039230	ProperStrand	34	1	-9.9344
chr6	142294214	142294255	protein_coding	Pyroxd1	utr5	ENSMUSG00000041671	ProperStrand	6	chr17	35299551	35299641	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	4	-19.6967
chr1	137853803	137853820	protein_coding	Igfn1	intron	ENSMUSG00000051985	ProperStrand	3	chr9	120039533	120039603	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-9.5119
chr15	37936263	37937709	protein_coding	Ubr5	exon	ENSMUSG00000037487	ProperStrand	258	chr17	24856620	24856667	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-3.6238
chr5	34263196	34263247	protein_coding	Whsc2	exon	ENSMUSG00000029111	ProperStrand	9	chr10	23505152	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.5477
chr6	18816704	18816720	protein_coding	Ankrd7	exon	ENSMUSG00000029517	ProperStrand	2	chr15	76912584	76912611	protein_coding	Rbfox2	utr3	ENSMUSG00000033565	ProperStrand	55	2	-inf
chr2	167836657	167836678	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	1	-6.5604
chr14	70479045	70479063	protein_coding	Egr3	exon	ENSMUSG00000033730	NonProperStrand	3	chr9	120038551	120038608	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-15.4676
chr9	40612871	40612918	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	chr11	55296262	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	2	-4.6154
chr13	19684241	19684257	protein_coding	Epdr1	utr3	ENSMUSG00000002808	ProperStrand	46	chr1	74818604	74818620	protein_coding	Wnt6	utr5	ENSMUSG00000033227	NonProperStrand	11	1	-17.3541
chr10	62342222	62342245	protein_coding	Tet1	exon	ENSMUSG00000047146	ProperStrand	286	chr4	131866155	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	7	-10.4141
chr18	37801963	37801990	protein_coding	Taf7	utr3	ENSMUSG00000051316	ProperStrand	24	chr11	106362337	106362380	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-7.6694
chr19	10645264	10645280	protein_coding	Tmem138	utr3	ENSMUSG00000024666	NonProperStrand	354	chr7	86242854	86242897	protein_coding	Acan	exon	ENSMUSG00000030607	ProperStrand	38	1	-10.6780
chr2	164658312	164658364	protein_coding	Neurl2	exon	ENSMUSG00000039873	ProperStrand	2	chr2	145077955	145209253	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-15.1878
chr7	13516167	13516205	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr11	97639606	97639642	protein_coding	Rpl23	exon	ENSMUSG00000071415	ProperStrand	920	2	-5.7374
chr6	129628834	129628851	protein_coding	Klrc1	exon	ENSMUSG00000030167	NonProperStrand	49	chr19	8799581	8799634	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	2	-11.5290
chr4	116475702	116475726	protein_coding	Tesk2	exon	ENSMUSG00000033985	ProperStrand	4	chr10	67010774	67010896	protein_coding	Ado	exon	ENSMUSG00000057134	ProperStrand	7	1	-inf
chr5	135549587	135549638	protein_coding	Vps37d	exon	ENSMUSG00000043614	ProperStrand	2	chr16	23110962	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr4	130309908	130309961	protein_coding	Pum1	exon	ENSMUSG00000028580	ProperStrand	131	chrX	91435162	91435181	protein_coding	Eif2s3x	utr3	ENSMUSG00000035150	NonProperStrand	83	2	-17.2710
chr1	74297831	74297849	protein_coding	Arpc2	exon	ENSMUSG00000006304	ProperStrand	16	chr14	31827478	31827532	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-9.6141
chr11	46086186	46088194	protein_coding	Cyfip2	exon	ENSMUSG00000020340	ProperStrand	28	chr3	88715214	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	4	-18.6600
chr6	37249769	37249785	protein_coding	Dgki	exon	ENSMUSG00000038665	ProperStrand	22	chr7	38468013	38468033	protein_coding	Zfp536	intron	ENSMUSG00000043456	ProperStrand	57	1	-15.4256
chr11	102337964	102338052	protein_coding	Gpatch8	utr3	ENSMUSG00000034621	ProperStrand	49	chr16	23111776	23111814	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-3.9967
chr5	118477951	118477967	protein_coding	Tesc	exon	ENSMUSG00000029359	ProperStrand	114	chr15	79663988	79664004	protein_coding	Npcd	exon	ENSMUSG00000089837	ProperStrand	11	1	-15.4850
chr1	93263060	93263079	protein_coding	Fam132b	exon	ENSMUSG00000047443	NonProperStrand	98	chr15	79908956	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	2	-7.5161
chr7	30231472	30231564	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	chr12	110874223	110874290	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	1	-5.5527
chrX	7316017	7316117	protein_coding	Ccdc120	intron	ENSMUSG00000031150	NonProperStrand	10	chr9	15119738	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-6.0614
chr6	134457514	134457558	protein_coding	Lrp6	exon	ENSMUSG00000030201	ProperStrand	42	chr5	121655036	121655126	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.4217
chr5	136657190	136657275	protein_coding	Prkrip1	utr3	ENSMUSG00000039737	ProperStrand	52	chr18	74938051	74938141	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	ProperStrand	1022	1	-7.9344
chr5	38098600	38098619	protein_coding	Stk32b	intron	ENSMUSG00000029123	NonProperStrand	8	chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	2	-18.2491
chr3	54518703	54518753	protein_coding	Fam48a	intron	ENSMUSG00000027751	ProperStrand	16	chr12	83442056	83442134	protein_coding	Sipa1l1	exon	ENSMUSG00000042700	ProperStrand	84	1	-15.3404
chr5	77765600	77768386	protein_coding	Polr2b	exon	ENSMUSG00000029250	ProperStrand	68	chr1	129932965	129932982	protein_coding	Zranb3	intron	ENSMUSG00000036086	ProperStrand	19	1	-15.3956
chr17	34099112	34099439	protein_coding	Vps52	exon	ENSMUSG00000024319	ProperStrand	9	chr14	76247720	76247800	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-7.9615
chr5	122695623	122696517	protein_coding	Tctn1	exon	ENSMUSG00000038593	ProperStrand	34	chr2	91613185	91613203	protein_coding	Ambra1	exon	ENSMUSG00000040506	ProperStrand	65	3	-19.0506
chrX	166425650	166425677	protein_coding	Mid1	exon	ENSMUSG00000035299	ProperStrand	209	chr5	77738902	77738918	protein_coding	Noa1	exon	ENSMUSG00000036285	ProperStrand	147	1	-9.0144
chr8	86247941	86248091	protein_coding	Cd97	exon	ENSMUSG00000002885	ProperStrand	37	chr4	131908236	131908297	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.1700
chr18	4846905	4846921	lincRNA	Gm10556	exon	ENSMUSG00000073646	NonProperStrand	2	chr11	62416575	62416632	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-12.5746
chr12	107058648	107061778	protein_coding	Papola	exon	ENSMUSG00000021111	ProperStrand	67	chr1	39605590	39605696	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	1	-7.1242
chr10	127790107	127790169	protein_coding	Cs	exon	ENSMUSG00000005683	ProperStrand	63	chr2	86138158	86138174	protein_coding	Olfr1052	exon	ENSMUSG00000047149	NonProperStrand	119	1	-11.8405
chr15	103028493	103028510	protein_coding	Cbx5	utr3	ENSMUSG00000009575	ProperStrand	98	chr16	23111694	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-5.2224
chr7	53131110	53131210	protein_coding	Kdelr1	intron	ENSMUSG00000002778	ProperStrand	7	chr11	77996558	77996620	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-10.4853
chr5	124900781	124900871	protein_coding	Setd8	exon	ENSMUSG00000049327	ProperStrand	71	chr16	23111373	23111453	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-2.0465
chr9	78023109	78023150	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr4	57909778	57909816	protein_coding	Akap2	utr3	ENSMUSG00000038729	ProperStrand	14	2	-14.0780
chr2	90235297	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	32957268	32957284	lincRNA	Gm16684	intron	ENSMUSG00000085948	ProperStrand	43	1	-5.1055
chr2	89368462	89368479	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	chr7	116664794	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	5	-4.0923
chr7	3218644	3218664	miRNA	Mir290	.	ENSMUSG00000077815	ProperStrand	3	chr12	17552949	17552994	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	2	-19.3291
chr4	55431651	55431668	lincRNA	Gm12505	exon	ENSMUSG00000087070	ProperStrand	447	chr17	39985626	39985726	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	9	-22.4188
chr15	75456896	75456986	LINE	L2b	L2	chr15L2b75456797	ProperStrand	6	chr2	26768368	26768395	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	6	-inf
chr7	148542099	148542226	protein_coding	Eps8l2	exon	ENSMUSG00000025504	ProperStrand	14	chr16	23110526	23110557	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.1866
chr11	100215390	100215582	protein_coding	Hap1	exon	ENSMUSG00000006930	ProperStrand	21	chr16	90240475	90240509	protein_coding	Scaf4	intron	ENSMUSG00000022983	ProperStrand	44	5	-inf
chr7	29136525	29136653	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	chr1	145626057	145626196	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	6	-1.5443
chr9	78023122	78023202	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr13	90238634	90238724	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	1	-1.6601
chr5	108332378	108332690	protein_coding	Rpl5	exon	ENSMUSG00000058558	ProperStrand	235	chr9	72816966	72816982	protein_coding	Dyx1c1	exon	ENSMUSG00000092192	ProperStrand	34	1	-11.7226
chr16	20726474	20726491	protein_coding	Thpo	exon	ENSMUSG00000022847	ProperStrand	3	chr9	21599335	21599351	protein_coding	Kank2	exon	ENSMUSG00000032194	ProperStrand	196	1	-17.5987
chr15	79256005	79256693	protein_coding	Csnk1e	exon	ENSMUSG00000022433	ProperStrand	59	chr11	69481335	69481373	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-5.5471
chr16	56825886	56825955	protein_coding	Tmem45a	exon	ENSMUSG00000022754	ProperStrand	1	chr12	55797768	55797858	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	1	-inf
chr1	32645456	32645497	protein_coding	Khdrbs2	intron	ENSMUSG00000026058	ProperStrand	10	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-6.7807
chr10	98726553	98726570	protein_coding	Dusp6	exon	ENSMUSG00000019960	ProperStrand	116	chr19	45009666	45009757	protein_coding	Fam178a	exon	ENSMUSG00000036097	ProperStrand	29	1	-13.4623
chr1	192712615	192712631	protein_coding	Rps6kc1	exon	ENSMUSG00000089872	ProperStrand	241	chr17	13112450	13112509	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-2.0816
chr16	31455189	31455232	protein_coding	Bdh1	exon	ENSMUSG00000046598	ProperStrand	17	chr18	35714190	35714290	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	6	-inf
chr1	133252344	133252385	protein_coding	Srgap2	intron	ENSMUSG00000026425	ProperStrand	299	chr7	72451257	72451357	protein_coding	Tjp1	exon	ENSMUSG00000030516	ProperStrand	78	1	-9.5677
chr9	30876550	30876640	protein_coding	Zbtb44	utr3	ENSMUSG00000047412	ProperStrand	68	chr4	131908274	131908354	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.2431
chr19	46342987	46343290	protein_coding	Gbf1	exon	ENSMUSG00000025224	ProperStrand	50	chr9	15119714	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-5.1174
chr2	120230127	120230145	protein_coding-noncoding	Ganc	utr5	ENSMUSG00000062646	ProperStrand	9	chr1	88241710	88241729	protein_coding	Ncl	utr3	ENSMUSG00000026234	NonProperStrand	5	1	-18.8319
chr8	108469572	108469784	protein_coding	Slc12a4	exon	ENSMUSG00000017765	ProperStrand	25	chr2	91436317	91436335	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	3	-20.0523
chr1	167763836	167763852	protein_coding	Cd247	intron	ENSMUSG00000005763	ProperStrand	10	chr16	23110454	23110477	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.8693
chr11	98698890	98698910	protein_coding	Rapgefl1	exon	ENSMUSG00000038020	NonProperStrand	16	chr15	34370545	34370674	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	7	-inf
chr5	141000555	141000571	protein_coding	Chst12	exon	ENSMUSG00000036599	NonProperStrand	42	chr12	17552949	17553031	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-5.7868
chr11	62416602	62416636	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	chr10	90644844	90644903	tRNA	tRNA856-AspGTC	.	68414	ProperStrand	65	1	-5.0111
chr14	31828168	31828497	protein_coding	Gnl3	exon	ENSMUSG00000042354	ProperStrand	53	chr4	131908236	131908276	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.6010
chr9	49316788	49317877	protein_coding	Ncam1	exon	ENSMUSG00000039542	ProperStrand	18	chrX	71517835	71517915	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-8.9682
chr10	61734518	61734562	protein_coding	Hk1	exon	ENSMUSG00000037012	ProperStrand	84	chr1	162965555	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.6776
chr11	55296241	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	chr4	56910496	56910628	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	2	-0.8017
chr8	79444417	79444434	protein_coding	Nr3c2	intron	ENSMUSG00000031618	ProperStrand	23	chr1	162965531	162965596	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.0979
chr7	108521650	108521758	protein_coding	Arap1	exon	ENSMUSG00000032812	ProperStrand	23	chr2	166621637	166621654	protein_coding	Trp53rk	utr3	ENSMUSG00000042854	ProperStrand	13	7	-19.2494
chr8	13416897	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr8	127317792	127317808	protein_coding	Trim67	utr5	ENSMUSG00000036913	ProperStrand	43	1	-7.1164
chr9	20811935	20811968	protein_coding	Mrpl4	exon	ENSMUSG00000003299	ProperStrand	6	chr16	23110982	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-6.6757
chr10	86156201	86156258	protein_coding	Hsp90b1	exon	ENSMUSG00000020048	ProperStrand	396	chr13	54848608	54848624	protein_coding	Gprin1	intron	ENSMUSG00000069227	ProperStrand	55	1	-9.7085
chr5	136707645	136707662	protein_coding	Sh2b2	exon	ENSMUSG00000005057	NonProperStrand	101	chr9	43919824	43919840	protein_coding	Rnf26	exon	ENSMUSG00000053128	NonProperStrand	18	1	-14.7114
chr2	84887051	84887113	protein_coding	Ssrp1	utr3	ENSMUSG00000027067	ProperStrand	118	chr5	21305314	21305341	protein_coding	Psmc2	exon	ENSMUSG00000028932	ProperStrand	27	2	-19.9938
chr11	42440243	42440259	protein_coding	Gabrb2	exon	ENSMUSG00000007653	ProperStrand	248	chr7	52382803	52382831	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-4.0033
chr8	86667630	86667714	protein_coding	Cc2d1a	intron	ENSMUSG00000036686	ProperStrand	18	chr10	23505154	23505244	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.2069
chr11	75303714	75303926	protein_coding	Prpf8	exon	ENSMUSG00000020850	ProperStrand	255	chr11	77996557	77996578	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-3.3332
chr18	65587321	65587345	misc_RNA	AC102240.1	.	ENSMUSG00000093283	ProperStrand	7	chr17	29388249	29388314	protein_coding	Ppil1	utr3	ENSMUSG00000024007	ProperStrand	17	2	-inf
chr9	120480654	120481280	protein_coding	Rpl14	exon	ENSMUSG00000025794	ProperStrand	123	chr10	30530958	30531020	tRNA	tRNA81-GluCTC	.	1077761	ProperStrand	154	1	-9.9807
chr17	75690723	75690739	protein_coding	Ltbp1	exon	ENSMUSG00000001870	ProperStrand	136	chr6	94776857	94776877	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	1	-7.4676
chr10	41249803	41249833	protein_coding	Cd164	utr3	ENSMUSG00000019818	ProperStrand	38	chr18	75161131	75161173	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	2	-15.7058
chr11	72790917	72791775	protein_coding	Atp2a3	exon	ENSMUSG00000020788	ProperStrand	29	chr14	33005156	33005236	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-5.3955
chr12	101183509	101183529	protein_coding	Tdp1	exon	ENSMUSG00000021177	ProperStrand	23	chr8	98269962	98270015	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	2	-11.9852
chr1	154681022	154681039	protein_coding	Ncf2	exon	ENSMUSG00000026480	ProperStrand	12	chr4	131865856	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-11.4353
chr3	100884227	100884250	protein_coding	Ptgfrn	exon	ENSMUSG00000027864	ProperStrand	67	chr10	110922585	110923764	protein_coding	Nap1l1	exon	ENSMUSG00000058799	ProperStrand	185	5	-19.6182
chr5	74489275	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr7	130461909	130461946	protein_coding	Arhgap17	exon	ENSMUSG00000030766	ProperStrand	7	1	-10.0043
chr19	59064715	59064732	protein_coding	4930506M07Rik	exon	ENSMUSG00000041362	ProperStrand	36	chr4	116826699	116826766	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	2	-12.4908
chr9	110844891	110844929	protein_coding	Tdgf1	exon	ENSMUSG00000032494	ProperStrand	218	chr19	8799849	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-2.5688
chr11	7050901	7060219	protein_coding	Adcy1	exon	ENSMUSG00000020431	ProperStrand	183	chr7	19590197	19590213	protein_coding	Irf2bp1	exon	ENSMUSG00000044030	NonProperStrand	81	1	-10.4729
chr4	131908687	131908739	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	chr10	90644170	90644194	tRNA	tRNA857-TrpCCA	.	144467	ProperStrand	23	1	-2.7500
chr2	91771603	91771797	protein_coding	Mdk	utr5	ENSMUSG00000027239	ProperStrand	56	chr4	129662259	129662276	protein_coding	Bai2	utr5	ENSMUSG00000028782	ProperStrand	119	1	-12.0777
chr11	45723144	45723160	protein_coding	Clint1	utr3	ENSMUSG00000006169	NonProperStrand	273	chr1	88202321	88202372	protein_coding	B3gnt7	exon	ENSMUSG00000079445	ProperStrand	13	1	-13.3917
chr15	99610972	99611010	protein_coding	Lima1	exon	ENSMUSG00000023022	ProperStrand	159	chr19	8799581	8799644	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	3	-11.4716
chr2	90235285	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr16	5100103	5100119	protein_coding	Ppl	exon	ENSMUSG00000039457	ProperStrand	37	1	-5.3993
chr12	110881049	110881114	lincRNA	Rian	intron	ENSMUSG00000091793	ProperStrand	612	chr1	78421842	78421881	protein_coding	Farsb	exon	ENSMUSG00000026245	ProperStrand	40	2	-15.0137
chr16	23109044	23109091	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	chr4	132394296	132394396	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	1	-3.2710
chr5	65952376	65952395	protein_coding	Ube2k	intron	ENSMUSG00000029203	ProperStrand	289	chr4	56910502	56910602	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-3.1215
chr19	23140045	23140062	lincRNA	C330002G04Rik	intron	ENSMUSG00000087169	ProperStrand	34	chr16	23110526	23110574	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.4743
chr2	169944538	169944631	protein_coding	Zfp217	exon	ENSMUSG00000052056	ProperStrand	79	chr7	150717298	150717348	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-4.9721
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr10	23506296	23506348	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-1.1978
chr9	35285611	35285664	protein_coding	Cdon	exon	ENSMUSG00000038119	ProperStrand	33	chr9	15119724	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.7105
chr5	116174721	116174738	protein_coding	Ccdc64	exon	ENSMUSG00000041609	ProperStrand	51	chr11	69481364	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.4975
chr17	75097753	75097802	protein_coding	Birc6	intron	ENSMUSG00000024073	ProperStrand	110	chr10	23505190	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-3.0334
chr2	59612903	59612983	protein_coding	Tanc1	intron	ENSMUSG00000035168	ProperStrand	80	chr16	43886831	43886921	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	1	-7.5014
chr4	126531056	126531075	protein_coding	AU040320	utr3	ENSMUSG00000028830	ProperStrand	14	chr6	87769189	87769558	protein_coding	Isy1	exon	ENSMUSG00000030056	ProperStrand	172	1	-14.1609
chr10	90579699	90584738	protein_coding	Slc25a3	utr3	ENSMUSG00000061904	ProperStrand	74	chr4	131908236	131908447	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	9	-15.1869
chr17	28536298	28536373	protein_coding	Fkbp5	utr3	ENSMUSG00000024222	ProperStrand	44	chr16	23110549	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	7	-19.9980
chr3	108228259	108228275	protein_coding	Sars	utr3	ENSMUSG00000068739	NonProperStrand	200	chr15	79654442	79654459	protein_coding	Cbx6	utr3	ENSMUSG00000089715	NonProperStrand	11	1	-14.3598
chr15	73410958	73411034	protein_coding	Slc45a4	utr3	ENSMUSG00000079020	ProperStrand	127	chr4	131865856	131865946	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-1.5630
chr8	13416895	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr5	74489543	74489677	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	7	-0.8250
chrX	155977235	155977304	protein_coding	A830080D01Rik	intron	ENSMUSG00000044150	ProperStrand	102	chr11	69481334	69481424	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	3	-6.1040
chr2	52550185	52550229	protein_coding	Stam2	utr3	ENSMUSG00000055371	ProperStrand	9	chr9	15119731	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-6.2797
chr11	119207004	119207020	protein_coding	Sgsh	utr3	ENSMUSG00000005043	ProperStrand	67	chr9	15119630	15119710	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.4401
chr1	191695106	191695136	protein_coding	Ptpn14	utr3	ENSMUSG00000026604	ProperStrand	74	chr7	34992750	34992767	protein_coding	Gpi1	exon	ENSMUSG00000036427	NonProperStrand	40	1	-13.7154
chr14	96988089	96988179	snoRNA	ENSMUSG00000064581_SNORA30	.	ENSMUSG00000064581	ProperStrand	146	chr5	130300436	130300516	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.1419
chr4	148757921	148759253	protein_coding	Ube4b	exon	ENSMUSG00000028960	ProperStrand	66	chr9	65913461	65914102	protein_coding	Ppib	exon	ENSMUSG00000032383	ProperStrand	31	3	-18.7635
chr9	78326773	78326873	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr5	115939540	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-1.4248
chr8	123893512	123893583	protein_coding	Gm20388	intron	ENSMUSG00000092329	NonProperStrand	203	chr19	8798769	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-2.5608
chr11	22897032	22897132	protein_coding	Cct4	exon	ENSMUSG00000007739	ProperStrand	81	chr9	108230046	108233203	protein_coding	Rhoa	exon	ENSMUSG00000007815	ProperStrand	45	1	-13.2912
mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr16	72800514	72800532	protein_coding	Robo1	intron	ENSMUSG00000022883	NonProperStrand	188	1	-3.7151
chr17	66468411	66468427	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	chr15	85967806	85967876	protein_coding	Gramd4	utr3	ENSMUSG00000035900	ProperStrand	39	1	-10.7238
chr11	6303879	6303926	protein_coding	Zmiz2	exon	ENSMUSG00000041164	ProperStrand	69	chr1	162968461	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-5.8042
chr16	8716658	8738299	protein_coding	Usp7	exon	ENSMUSG00000022710	ProperStrand	118	chr9	59525857	59525892	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	3	-13.4744
chr1	153602594	153602610	protein_coding	Edem3	utr5	ENSMUSG00000043019	ProperStrand	84	chr7	117166784	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	2	-6.9840
chr15	76199375	76199394	protein_coding	Fam203a	utr5	ENSMUSG00000022554	ProperStrand	13	chrX	34622959	34623023	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-6.1263
chr6	86619040	86619056	protein_coding	Mxd1	utr5	ENSMUSG00000001156	NonProperStrand	40	chr1	133057921	133060114	protein_coding	Eif2d	exon	ENSMUSG00000026427	ProperStrand	12	1	-17.4855
chr7	27963833	27963868	protein_coding	Rab4b	utr5	ENSMUSG00000053291	ProperStrand	5	chr16	23110549	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-7.3464
chr16	5030312	5032047	protein_coding	Glyr1	exon	ENSMUSG00000022536	ProperStrand	60	chr11	69481351	69481431	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-5.4997
chr4	144751901	144751973	protein_coding	Vps13d	exon	ENSMUSG00000020220	ProperStrand	59	chr19	8799829	8799900	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-4.9794
chr8	77523744	77523760	protein_coding	Hmgxb4	exon	ENSMUSG00000034518	ProperStrand	25	chr4	131908356	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.8464
chr19	5466370	5466460	protein_coding	Ctsw	intron	ENSMUSG00000024910	NonProperStrand	2	chr19	8800369	8800449	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-10.8391
chr14	55088486	55088536	protein_coding	Lrp10	exon	ENSMUSG00000022175	ProperStrand	19	chrX	159198537	159198604	protein_coding	Rbbp7	utr5	ENSMUSG00000031353	ProperStrand	48	2	-22.3689
chr12	113968852	113968935	protein_coding	AW555464	intron	ENSMUSG00000072825	ProperStrand	96	chr7	29136623	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.6132
chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	chr2	130103751	130103808	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-4.6751
chr8	113481288	113481387	protein_coding	St3gal2	utr5	ENSMUSG00000031749	NonProperStrand	9	chr15	82725616	82725639	protein_coding	Tcf20	intron	ENSMUSG00000041852	NonProperStrand	7	2	-20.6736
chrX	84483704	84483749	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr16	10600307	10600324	protein_coding	Clec16a	intron	ENSMUSG00000068663	NonProperStrand	10	1	-11.9083
chr2	26493428	26493518	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr16	33959225	33960274	protein_coding	Umps	exon	ENSMUSG00000022814	ProperStrand	20	1	-8.3972
chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr4	149618447	149619261	protein_coding	Eno1	exon	ENSMUSG00000063524	ProperStrand	432	2	-1.2636
chr12	52729414	52729514	protein_coding	Strn3	intron	ENSMUSG00000020954	ProperStrand	10	chr16	23111776	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.2069
chr5	20392574	20392664	protein_coding	Tmem60	utr3	ENSMUSG00000045435	ProperStrand	3	chr10	110918593	110918673	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-9.6547
chr5	73368804	73368894	protein_coding	Slain2	utr3	ENSMUSG00000036087	ProperStrand	15	chr2	26494720	26494800	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	5	-20.1428
chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	chr3	19528533	19528550	protein_coding	1700064H15Rik	exon	ENSMUSG00000082766	NonProperStrand	78	1	-11.1579
chr9	107943314	107943414	protein_coding	Ip6k1	exon	ENSMUSG00000032594	ProperStrand	61	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.3950
chr15	84032681	84032771	protein_coding	Samm50	exon	ENSMUSG00000022437	ProperStrand	51	chr3	123210895	123210975	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.3354
chr5	75473198	75473215	protein_coding	Gsx2	utr3	ENSMUSG00000035946	ProperStrand	307	chr9	15118322	15118356	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-0.8887
chr5	121160501	121160518	protein_coding	Dtx1	utr5	ENSMUSG00000029603	NonProperStrand	33	chr10	40572439	40572456	protein_coding	Cdc40	intron	ENSMUSG00000038446	ProperStrand	34	1	-15.6484
chr9	122762627	122762727	protein_coding	Zfp445	exon	ENSMUSG00000047036	ProperStrand	8	chr8	113366285	113366332	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	1	-13.3149
chr8	87574106	87574174	snoRNA	ENSMUSG00000077527_SNORD41	.	ENSMUSG00000077527	ProperStrand	29	chr5	74489596	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-5.1714
chr2	32067774	32071603	protein_coding	Prrc2b	exon	ENSMUSG00000039262	ProperStrand	344	chr11	69481341	69481431	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	6	-5.9180
chr10	87785923	87785940	protein_coding	Dram1	utr3	ENSMUSG00000020057	ProperStrand	24	chr7	74189892	74189909	protein_coding	Adamts17	intron	ENSMUSG00000058145	NonProperStrand	73	1	-14.7718
chr2	32818787	32818887	protein_coding-noncoding	Rpl12	utr5	ENSMUSG00000038900	ProperStrand	68	chr11	98878344	98878400	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-6.0379
chr14	47894449	47894509	protein_coding	Wdhd1	exon	ENSMUSG00000037572	ProperStrand	35	chr7	150717298	150717397	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-6.5710
chrX	84483698	84483731	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr10	61329160	61330213	protein_coding	Col13a1	exon	ENSMUSG00000058806	ProperStrand	120	1	-6.8697
chr12	87860251	87861826	protein_coding	Esrrb	utr3	ENSMUSG00000021255	ProperStrand	254	chr15	34370543	34370621	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	5	-6.9194
chr7	133939597	133939740	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	chr5	127728745	127728761	protein_coding	Tmem132c	intron	ENSMUSG00000034324	ProperStrand	25	1	-10.1068
chr5	74489543	74489586	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr4	106258971	106258999	protein_coding	Dhcr24	exon	ENSMUSG00000034926	ProperStrand	94	3	-11.2642
chr6	122661725	122661748	protein_coding	Nanog	exon	ENSMUSG00000012396	ProperStrand	66	chr7	116664872	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.3863
chr6	3794656	3794673	SINE	B4A	B4	chr6B4A3794525	NonProperStrand	26	chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	1	-10.5281
chr7	30094518	30094535	protein_coding	Dpf1	exon	ENSMUSG00000030584	NonProperStrand	1	chr4	131865867	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr7	147397275	147397292	LINE	L1_Mus4	L1	chr7L1_Mus4147397221	ProperStrand	6	chr1	59761124	59761180	snoRNA	ENSMUSG00000089512_SNORD11	.	ENSMUSG00000089512	ProperStrand	43	1	-18.2794
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr2	29014439	29014455	protein_coding	Setx	exon	ENSMUSG00000043535	ProperStrand	187	1	-7.1030
chr17	10402296	10402318	protein_coding	Qk	utr3	ENSMUSG00000062078	ProperStrand	63	chr4	131908246	131908297	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.3492
chr4	123047073	123191182	protein_coding	Macf1	exon	ENSMUSG00000028649	ProperStrand	320	chr7	117189961	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	3	-2.5829
chr2	146125209	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	chr11	68886927	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-2.1461
chr12	86101719	86101754	protein_coding	Npc2	exon	ENSMUSG00000021242	ProperStrand	29	chr11	69483136	69483212	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-9.3253
chr4	119941547	119941564	protein_coding	Foxo6	exon	ENSMUSG00000052135	ProperStrand	31	chr17	24857725	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.4661
chr5	140828143	140829031	protein_coding	Snx8	exon	ENSMUSG00000029560	ProperStrand	106	chr1	162967547	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-2.4647
chr9	120038466	120038493	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	chr3	153574574	153574626	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	2	-1.0147
chr3	151163120	151163136	protein_coding	Eltd1	exon	ENSMUSG00000039167	NonProperStrand	2	chr4	131908233	131908333	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-inf
chr14	57341976	57342009	protein_coding	Pspc1	exon	ENSMUSG00000021938	ProperStrand	11	chr4	131908689	131908746	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.1344
chr10	82347785	82347938	protein_coding	Txnrd1	exon	ENSMUSG00000020250	ProperStrand	47	chr13	49779747	49779802	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-7.5003
chr7	146684406	146684425	protein_coding	Inpp5a	intron	ENSMUSG00000025477	ProperStrand	166	chr2	32818883	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-3.5354
chr16	20357570	20357595	protein_coding	Abcc5	exon	ENSMUSG00000022822	ProperStrand	30	chr5	5285754	5285771	protein_coding	Cdk14	intron	ENSMUSG00000028926	NonProperStrand	23	1	-16.6246
chr18	35102320	35102366	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	chr7	51505572	51505591	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	1	-2.3464
chr4	129993910	129993990	protein_coding	Zcchc17	exon	ENSMUSG00000028772	ProperStrand	8	chr10	110918602	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-7.4365
chr5	21272215	21272241	protein_coding	Dnajc2	intron	ENSMUSG00000029014	ProperStrand	31	chr4	131908236	131908355	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-4.3850
chr2	156853205	156853285	protein_coding	9830001H06Rik	exon	ENSMUSG00000055485	ProperStrand	26	chr3	123210895	123210985	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	5	-15.2974
chr11	115885017	115885053	protein_coding	H3f3b	exon	ENSMUSG00000016559	ProperStrand	76	chr16	23111447	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.9513
chr1	137345591	137346547	protein_coding	Nav1	exon	ENSMUSG00000009418	ProperStrand	38	chr16	23110549	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.2698
chr4	131908419	131908464	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr12	109460710	109460726	protein_coding	Ccdc85c	intron	ENSMUSG00000084883	ProperStrand	157	1	-5.3662
chr4	131399490	131399506	protein_coding	Mecr	exon	ENSMUSG00000028910	NonProperStrand	109	chr1	89681125	89681215	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-4.2915
chr4	131865856	131865946	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr2	37255617	37255659	snoRNA	ENSMUSG00000077756_Snord90	.	ENSMUSG00000077756	ProperStrand	167	5	-3.9882
chr13	101572687	101572777	protein_coding	Slc30a5	utr3	ENSMUSG00000021629	ProperStrand	12	chr9	120038495	120038575	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-6.1449
chr3	23143900	23143980	LINE	L1Md_F2	L1	chr3L1Md_F223143789	ProperStrand	1	chr7	113530034	113530124	LINE	L1_Mus2	L1	chr7L1_Mus2113529405	ProperStrand	1	1	-inf
chrX	103382562	103397868	protein_coding	Pgk1	exon	ENSMUSG00000062070	ProperStrand	484	chr17	24857717	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	4	-0.8345
chr11	51436661	51436723	protein_coding	Nhp2	utr3	ENSMUSG00000001056	ProperStrand	32	chr16	23111777	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-2.9714
chr12	81741956	81744761	protein_coding	Erh	exon	ENSMUSG00000021131	ProperStrand	20	chrX	71517835	71517925	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-8.7528
chr17	12463951	12464065	protein_coding	Map3k4	exon	ENSMUSG00000014426	ProperStrand	36	chr13	6585772	6585816	protein_coding	Pfkp	exon	ENSMUSG00000021196	ProperStrand	197	1	-11.9601
chr17	24641400	24641416	protein_coding	Caskin1	exon	ENSMUSG00000033597	ProperStrand	6	chr1	63225681	63225709	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-11.4075
chr13	45292504	45292594	LINE	L1_Mur2	L1	chr13L1_Mur245292198	ProperStrand	1	chr13	45292948	45293038	LTR	MLT1A1	MaLR	chr13MLT1A145292907	NonProperStrand	1	1	-inf
chr11	119644206	119644269	protein_coding	Rptor	intron	ENSMUSG00000025583	ProperStrand	76	chr11	97643002	97643092	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.0775
chr1	37488391	37489455	protein_coding	Unc50	exon	ENSMUSG00000026111	ProperStrand	14	chr13	84433000	84433081	protein_coding	Tmem161b	exon	ENSMUSG00000035762	ProperStrand	22	8	-inf
chr8	87195389	87195479	protein_coding	Nacc1	utr3	ENSMUSG00000001910	ProperStrand	130	chr9	15119666	15119746	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.3970
chr8	61726158	61726238	DNA	Charlie1a	MER1_type	chr8Charlie1a61725602	NonProperStrand	1	chr8	61726607	61726697	LINE	Lx8	L1	chr8Lx861726455	ProperStrand	1	1	-inf
chr9	62992379	62992395	protein_coding	Skor1	exon	ENSMUSG00000022245	NonProperStrand	70	chr7	116663710	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.2513
chr16	20654695	20656979	protein_coding	Psmd2	exon	ENSMUSG00000006998	ProperStrand	99	chr18	35714196	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	5	-11.7649
chr13	95160752	95164675	protein_coding	Ap3b1	exon	ENSMUSG00000021686	ProperStrand	96	chr1	162965531	162965576	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-4.3221
chr15	36535667	36538176	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr17	67235239	67235259	protein_coding	Ptprm	intron	ENSMUSG00000033278	NonProperStrand	11	1	-11.3388
chr2	90235291	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr19	10823569	10823587	protein_coding	A430093F15Rik	intron	ENSMUSG00000067577	NonProperStrand	34	1	-5.5655
chr16	36916389	36916479	protein_coding	Golgb1	exon	ENSMUSG00000034243	ProperStrand	92	chr12	106269398	106269478	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-3.3462
chr5	114198000	114198801	protein_coding	Sart3	exon	ENSMUSG00000018974	ProperStrand	50	chr18	78012787	78012843	protein_coding	Atp5a1	utr5	ENSMUSG00000025428	ProperStrand	254	1	-10.7874
chr15	30188192	30188214	protein_coding	Ctnnd2	intron	ENSMUSG00000022240	NonProperStrand	12	chr6	81992905	81992921	protein_coding	Fam176a	intron	ENSMUSG00000035104	ProperStrand	64	1	-16.4359
chr9	15119648	15119969	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	chr2	130103751	130103799	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	7	-2.0569
chr4	106111701	106111717	protein_coding	Usp24	utr3	ENSMUSG00000028514	ProperStrand	74	chr5	37187648	37187695	protein_coding	Mrfap1	exon	ENSMUSG00000055302	ProperStrand	62	1	-12.8286
chr7	152421701	152421786	Low_complexity	GA-rich	Low_complexity	chr7GA-rich152421714	ProperStrand	1	chr11	3402076	3402092	protein_coding	Inpp5j	exon	ENSMUSG00000034570	NonProperStrand	2	1	-inf
chr19	46329058	46330173	protein_coding	Gbf1	exon	ENSMUSG00000025224	ProperStrand	50	chr11	99885311	99885327	protein_coding	Krt33b	exon	ENSMUSG00000057723	NonProperStrand	352	1	-10.1355
chr11	62416578	62416615	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	chr4	131866650	131866676	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	1	-1.4587
chr11	77992465	77992501	protein_coding	Tlcd1	exon	ENSMUSG00000019437	ProperStrand	4	chr17	36061030	36061144	protein_coding	Ppp1r10	intron	ENSMUSG00000039220	ProperStrand	45	1	-18.7780
chr2	119590039	119590109	protein_coding	Rpap1	exon	ENSMUSG00000034032	ProperStrand	96	chr7	117189961	117190013	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-2.5009
chr11	63885336	63887052	protein_coding	Cox10	exon	ENSMUSG00000042148	NonProperStrand	187	chr4	116826700	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-4.5648
chr15	101926776	101926867	protein_coding	Eif4b	utr3	ENSMUSG00000058655	ProperStrand	484	chr6	125050558	125050589	protein_coding	Chd4	exon	ENSMUSG00000063870	ProperStrand	303	3	-13.6101
chr6	87853487	87854104	protein_coding	Copg	exon	ENSMUSG00000030058	ProperStrand	68	chr5	74489595	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	3	-8.8045
chr2	28368857	28368876	protein_coding	Ralgds	utr5	ENSMUSG00000026821	ProperStrand	14	chr16	23111769	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	NonProperStrand	47	1	-16.9316
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr19	9091498	9091598	protein_coding	Ahnak	exon	ENSMUSG00000069833	ProperStrand	103	11	-inf
chr12	112779159	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	chr9	64022855	64022918	snoRNA	ENSMUSG00000065752_SNORD18	.	ENSMUSG00000065752	ProperStrand	845	2	-1.1922
chr2	144087324	144087440	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	chr1	162966813	162966855	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	3	-2.0829
chr12	100026543	100026577	protein_coding	Eml5	utr3	ENSMUSG00000051166	ProperStrand	26	chr11	68886944	68887040	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	3	-13.4442
chr4	115761934	115762006	protein_coding	Lrrc41	exon	ENSMUSG00000028703	ProperStrand	16	chr1	39605606	39605696	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	7	-inf
chr17	46884450	46884466	protein_coding	Cnpy3	exon	ENSMUSG00000023973	ProperStrand	85	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-4.5287
chr5	130712775	130712823	protein_coding	0610007L01Rik	exon	ENSMUSG00000053094	ProperStrand	39	chr16	23110890	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.7347
chr11	115840990	115841007	protein_coding	Itgb4	exon	ENSMUSG00000020758	ProperStrand	8	chr16	23110828	23110860	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.2180
chr2	32817270	32817330	protein_coding	Rpl12	utr5	ENSMUSG00000038900	ProperStrand	167	chr5	121655016	121655106	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-1.9600
chr18	10052133	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr4	69626424	69626440	LTR	RLTR26	ERVK	chr4RLTR2669626139	ProperStrand	1	1	-inf
chr18	36925610	36925633	protein_coding	Dnd1	exon	ENSMUSG00000044595	ProperStrand	14	chr2	158182154	158182280	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-7.9086
chr1	155320353	155320412	protein_coding	Dhx9	exon	ENSMUSG00000042699	ProperStrand	98	chr2	79843543	79843559	protein_coding	Pde1a	intron	ENSMUSG00000059173	NonProperStrand	275	1	-9.2774
chr13	48654465	48654482	LINE	L1MEc	L1	chr13L1MEc48654420	NonProperStrand	1	chr12	110918156	110918220	snoRNA	ENSMUSG00000065749_AF357428	.	ENSMUSG00000065749	ProperStrand	218	1	-inf
chr2	90235296	90235330	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr7	131541661	131541677	protein_coding	Hs3st4	utr3	ENSMUSG00000078591	NonProperStrand	10	1	-8.0457
chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	chr9	58101193	58102743	protein_coding	Stoml1	exon	ENSMUSG00000032333	NonProperStrand	2	1	-16.4000
chr10	83071454	83071483	protein_coding	Appl2	exon	ENSMUSG00000020263	NonProperStrand	5	chr4	117930139	117930201	protein_coding	Ptprf	exon	ENSMUSG00000033295	ProperStrand	337	2	-21.3634
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr17	25283313	25283329	protein_coding	Clcn7	exon	ENSMUSG00000036636	NonProperStrand	34	1	-9.7364
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr3	88497863	88497979	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-1.1673
chr14	63190010	63190028	protein_coding	Fam124a	intron	ENSMUSG00000035184	ProperStrand	14	chr1	173217898	173217915	protein_coding	Usp21	utr5	ENSMUSG00000053483	NonProperStrand	20	1	-18.9819
chr7	31513500	31513688	protein_coding	Tmem147	exon	ENSMUSG00000006315	ProperStrand	9	chr7	117189991	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-7.0617
chr1	24621377	24621394	protein_coding	Gm10925	exon	ENSMUSG00000090378	NonProperStrand	70	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.9986
chr18	10052131	10052152	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr7	105834555	105834572	lincRNA	Gm15506	intron	ENSMUSG00000086477	ProperStrand	4	1	-14.4729
chr7	125286822	125288850	protein_coding	Smg1	exon	ENSMUSG00000030655	ProperStrand	70	chr7	116663634	116663714	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.2513
chr9	50688762	50688781	protein_coding	Ppp2r1b	utr3	ENSMUSG00000032058	NonProperStrand	5	chr5	34894211	34894227	protein_coding	Sh3bp2	utr5	ENSMUSG00000054520	ProperStrand	43	1	-19.2672
chr11	43393389	43396682	protein_coding	Ccnjl	exon	ENSMUSG00000044707	ProperStrand	13	chr18	73693168	73693191	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	4	-inf
chr4	21606097	21606114	protein_coding	Prdm13	exon	ENSMUSG00000040478	ProperStrand	51	chr1	66521957	66521973	protein_coding	Unc80	intron	ENSMUSG00000055567	NonProperStrand	212	1	-11.1092
chr3	75331538	75331554	protein_coding	Pdcd10	exon	ENSMUSG00000027835	NonProperStrand	1	chr9	15118322	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-inf
chr8	109182103	109182203	protein_coding	Cdh1	exon	ENSMUSG00000000303	ProperStrand	283	chr18	35102298	35102342	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-3.6060
chr2	26768049	26768127	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	chr10	23505148	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	41	-inf
chr3	28000777	28000806	protein_coding	Pld1	intron	ENSMUSG00000027695	ProperStrand	5	chr18	35714162	35714252	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-8.4504
chr7	52136442	52136459	protein_coding	Med25	exon	ENSMUSG00000002968	ProperStrand	33	chr2	118920652	118920697	protein_coding	Casc5	intron	ENSMUSG00000027326	ProperStrand	30	2	-20.3255
chr18	35413350	35413380	protein_coding	Ctnna1	exon	ENSMUSG00000037815	ProperStrand	115	chr16	23111778	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-0.9764
chr6	72388908	72388924	protein_coding	Mat2a	intron	ENSMUSG00000053907	ProperStrand	51	chr4	131908689	131908791	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.4523
chrX	20194447	20194504	protein_coding	Ndufb11	utr5	ENSMUSG00000031059	ProperStrand	4	chr15	77356785	77356801	protein_coding	Apol7c	exon	ENSMUSG00000044309	ProperStrand	197	1	-16.6048
chr5	124820272	124824385	protein_coding	Sbno1	utr3	ENSMUSG00000038095	ProperStrand	134	chr9	15118248	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-3.7198
chr1	174000253	174005133	protein_coding	Ncstn	exon	ENSMUSG00000003458	ProperStrand	20	chr11	6428060	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	5	-19.6033
chr2	27315489	27315534	protein_coding	Brd3	intron	ENSMUSG00000026918	ProperStrand	85	chr16	23110455	23110538	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.8887
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr3	113827103	113921818	protein_coding	Col11a1	utr3	ENSMUSG00000027966	NonProperStrand	139	2	-5.0392
chr3	108228259	108228275	protein_coding	Sars	utr3	ENSMUSG00000068739	NonProperStrand	200	chr1	162966813	162966851	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-3.9370
chr15	103072872	103074417	protein_coding	Hnrnpa1	exon	ENSMUSG00000046434	ProperStrand	68	chr4	131865855	131865969	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-6.4385
chr10	75359822	75360194	protein_coding	Smarcb1	exon	ENSMUSG00000000902	ProperStrand	109	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-6.5543
chr11	51414684	51414764	protein_coding	Hnrnpab	utr3	ENSMUSG00000020358	ProperStrand	124	chr8	83295574	83295664	protein_coding	Gab1	intron	ENSMUSG00000031714	ProperStrand	72	1	-11.4890
chr19	8799025	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	chr7	52382013	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	2	-0.9979
chr4	131908356	131908459	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr3	89699131	89699149	protein_coding	Il6ra	intron	ENSMUSG00000027947	ProperStrand	3	1	-13.6164
chr3	37750806	37750824	LINE	L1_Mus3	L1	chr3L1_Mus337750762	ProperStrand	38	chr15	79908960	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-6.3728
chr11	3649570	3649587	protein_coding	Osbp2	intron	ENSMUSG00000020435	ProperStrand	60	chr16	23110852	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-1.4598
chr12	85912590	85917230	protein_coding	Vsx2	exon	ENSMUSG00000021239	ProperStrand	26	chr17	27767425	27768188	protein_coding	Rps10	exon	ENSMUSG00000052146	ProperStrand	94	2	-19.0791
chr11	32431788	32431868	protein_coding	Efcab9	intron	ENSMUSG00000044056	ProperStrand	2	chr3	108357350	108357440	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-11.9197
chr15	95904688	95904706	lincRNA	D030018L15Rik	intron	ENSMUSG00000078925	ProperStrand	1	chr7	116663631	116663690	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-inf
chr1	139976731	139976747	protein_coding	Ptprc	exon	ENSMUSG00000026395	ProperStrand	27	chr3	123210904	123210972	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.4658
chr4	81029295	81029707	protein_coding	Mpdz	exon	ENSMUSG00000028402	ProperStrand	21	chr4	131908719	131908799	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.9128
chr15	81110991	81111009	SINE	ID4	ID	chr15ID481110956	ProperStrand	272	chr15	5068407	5068429	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-3.1937
chr4	57154472	57154489	protein_coding	Epb4.1l4b	intron	ENSMUSG00000028434	NonProperStrand	54	chr5	151755614	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-7.9502
chr11	74631669	74631759	protein_coding	Mettl16	utr3	ENSMUSG00000010554	ProperStrand	13	chr7	118219584	118219664	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	4	-21.4254
chr5	115538918	115538970	protein_coding	Sppl3	exon	ENSMUSG00000029550	ProperStrand	33	chr1	58592375	58596408	protein_coding	Fam126b	exon	ENSMUSG00000038174	ProperStrand	9	3	-19.2892
chr4	152856778	152856794	protein_coding	Ajap1	utr5	ENSMUSG00000039546	ProperStrand	51	chr7	116664852	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.8322
chr5	65203955	65203973	protein_coding	Klf3	intron	ENSMUSG00000029178	ProperStrand	56	chr3	68889026	68889047	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-3.3826
chr19	8963195	8963222	miRNA	Mir5136	.	ENSMUSG00000093314	ProperStrand	45	chr4	65899855	65899872	protein_coding	Astn2	intron	ENSMUSG00000028373	NonProperStrand	10	1	-17.6220
chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	chr6	71832550	71832650	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	2	-3.8936
chr8	119480325	119480415	protein_coding	Atmin	exon	ENSMUSG00000047388	ProperStrand	26	chr3	123210911	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	6	-18.7374
chr11	20012671	20012689	protein_coding	Actr2	intron	ENSMUSG00000020152	NonProperStrand	17	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-7.7258
chr10	90579780	90579837	protein_coding	Slc25a3	exon	ENSMUSG00000061904	ProperStrand	74	chr5	108336380	108336470	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-4.4782
chr18	75160711	75160776	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	chr8	13876112	13876202	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	2	-5.4646
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr17	36003610	36003627	antisense	5530401N12Rik	.	ENSMUSG00000087443	ProperStrand	8	1	-11.9238
chr2	53051224	53051313	protein_coding	Arl6ip6	exon	ENSMUSG00000026960	ProperStrand	8	chr7	57720249	57720265	protein_coding	Nell1	intron	ENSMUSG00000055409	ProperStrand	8	1	-18.6452
chrX	70703396	70703412	protein_coding	Haus7	exon	ENSMUSG00000031371	NonProperStrand	18	chr8	112117547	112117570	protein_coding	Dhodh	utr3	ENSMUSG00000031730	ProperStrand	3	1	-inf
chr11	4667145	4667233	protein_coding	Nf2	utr3	ENSMUSG00000009073	ProperStrand	72	chr11	97642972	97643062	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-3.8826
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr5	108334227	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-0.8829
chr7	116663620	116663710	protein_coding-noncoding	Rpl27a	utr5	ENSMUSG00000046364	ProperStrand	57	chr18	33954819	33954899	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-3.6002
chr16	48414280	48414370	LINE	L1MD2	L1	chr16L1MD248414251	ProperStrand	1	chr16	48414095	48414185	LTR	BGLII_B	ERVK	chr16BGLII_B48413819	ProperStrand	1	1	-inf
chr8	69036718	69036734	protein_coding	Tktl2	exon	ENSMUSG00000025519	ProperStrand	2	chr10	87639839	87639868	protein_coding	Nup37	exon	ENSMUSG00000035351	ProperStrand	11	1	-21.3789
chr11	55208259	55208291	protein_coding	Sparc	utr3	ENSMUSG00000018593	ProperStrand	48	chr10	23505559	23505618	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	3	-17.5730
chr3	51193210	51195173	protein_coding	4930583H14Rik	exon	ENSMUSG00000037161	ProperStrand	14	chr5	130300453	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	6	-inf
chr10	79422958	79423048	protein_coding	Wdr18	exon	ENSMUSG00000035754	ProperStrand	16	chr2	26494722	26494802	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.6366
chr7	116663741	116663770	protein_coding-noncoding	Rpl27a	utr5	ENSMUSG00000046364	ProperStrand	57	chr2	26494703	26494803	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	5	-13.9479
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr17	24665420	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-2.3117
chr15	79913291	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	chr14	31829399	31829467	snoRNA	ENSMUSG00000077797_Snord19	.	ENSMUSG00000077797	ProperStrand	62	5	-14.9900
chr16	64770795	64770813	protein_coding	4930453N24Rik	utr5	ENSMUSG00000059920	ProperStrand	39	chr7	116663640	116663712	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.2756
chr17	35089303	35089320	processed_transcript	1110038B12Rik	.	ENSMUSG00000092203	NonProperStrand	3	chr4	131865867	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.6896
chr9	107810701	107813856	protein_coding	Mst1r	exon	ENSMUSG00000032584	NonProperStrand	30	chr16	23110828	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0481
chr7	116663650	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	chr7	76096982	76097010	snoRNA	ENSMUSG00000065940_SNORA21	.	ENSMUSG00000065940	ProperStrand	5	1	-7.4047
chr14	27783615	27783665	protein_coding	Appl1	utr5	ENSMUSG00000040760	ProperStrand	42	chr19	42225881	42225897	protein_coding	Marveld1	utr3	ENSMUSG00000044345	NonProperStrand	112	1	-12.7810
chr8	119099185	119103155	protein_coding	Cdyl2	exon	ENSMUSG00000031758	ProperStrand	35	chr11	97642992	97643072	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.4316
chr19	53697545	53697597	protein_coding	Smc3	exon	ENSMUSG00000024974	ProperStrand	61	chr2	181000049	181000080	protein_coding	Gmeb2	intron	ENSMUSG00000038705	ProperStrand	10	1	-16.8766
chr2	129036574	129036631	protein_coding	Slc20a1	utr3	ENSMUSG00000027397	ProperStrand	81	chr3	123210854	123210889	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-2.9714
chr5	135914411	135914428	protein_coding	Hip1	exon	ENSMUSG00000039959	ProperStrand	30	chr2	26768049	26768119	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	1	-9.7898
chr10	80078436	80078452	protein_coding	Scamp4	utr3	ENSMUSG00000078441	NonProperStrand	20	chr17	24857717	24857807	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.2966
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr13	96100625	96100693	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	1	-1.5998
chr1	159163992	159164009	protein_coding	Rasal2	intron	ENSMUSG00000070565	NonProperStrand	22	chr12	17552961	17552982	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-7.0768
chr13	52742450	52742466	protein_coding	Syk	utr3	ENSMUSG00000021457	NonProperStrand	125	chr11	55296276	55296327	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-4.7507
chr4	131908363	131908468	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr11	62418013	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	4	-3.1409
chr2	181316563	181316579	protein_coding	Uckl1	exon	ENSMUSG00000089917	ProperStrand	142	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-3.4208
chr10	80809668	80809684	protein_coding	Hmg20b	exon	ENSMUSG00000020232	ProperStrand	157	chr6	115758011	115758048	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-3.6390
chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	chr10	107800746	107800854	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	1	-6.2142
chr6	115757045	115757145	protein_coding	Rpl32	exon	ENSMUSG00000057841	ProperStrand	137	chr18	35716813	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-0.9645
chr4	131909042	131909067	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr12	55797773	55797863	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	1	-2.0097
chr3	159502831	159502850	protein_coding	Wls	utr5	ENSMUSG00000028173	NonProperStrand	35	chr1	88247800	88247863	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-6.1551
chr5	122043404	122043445	protein_coding	Aldh2	exon	ENSMUSG00000029455	ProperStrand	108	chr12	21230190	21235130	protein_coding	Asap2	exon	ENSMUSG00000052632	ProperStrand	45	2	-19.3749
chrX	106857947	106857964	LTR	MT2A	ERVL	chrXMT2A106857898	ProperStrand	1	chr2	179917781	179918066	protein_coding	Lama5	exon	ENSMUSG00000015647	ProperStrand	365	1	-inf
chr3	122232506	122232596	protein_coding	Bcar3	exon	ENSMUSG00000028121	ProperStrand	21	chr7	29136528	29136608	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.2792
chr13	95317728	95317790	protein_coding	Ap3b1	utr3	ENSMUSG00000021686	ProperStrand	96	chr17	24857829	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-2.8969
chr2	167757828	167757845	protein_coding	Ptpn1	utr5	ENSMUSG00000027540	ProperStrand	10	chr4	116883449	116883539	snRNA	ENSMUSG00000070237_U5	.	ENSMUSG00000070237	ProperStrand	154	1	-15.0922
chr11	46780007	46780029	protein_coding	Sgcd	intron	ENSMUSG00000020354	ProperStrand	24	chr17	24857747	24857847	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-3.9467
chr1	89681350	89681396	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	chr1	59761144	59761180	snoRNA	ENSMUSG00000089512_SNORD11	.	ENSMUSG00000089512	ProperStrand	43	3	-14.0478
chr18	34928540	34928557	protein_coding	Fam53c	exon	ENSMUSG00000034300	ProperStrand	72	chr2	29835676	29838688	protein_coding	Spna2	exon	ENSMUSG00000057738	ProperStrand	222	1	-10.3230
chr4	120647079	120649560	protein_coding	Smap2	exon	ENSMUSG00000032870	ProperStrand	13	chr1	181027187	181027205	protein_coding	Smyd3	intron	ENSMUSG00000055067	ProperStrand	231	1	-13.7318
chrX	101157881	101157953	protein_coding	Rlim	exon	ENSMUSG00000056537	ProperStrand	38	chr3	123210854	123210933	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.8448
chr2	146125209	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	chr11	48616643	48616706	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	1	-7.1122
chr12	114290175	114290191	protein_coding	Pacs2	intron	ENSMUSG00000021143	NonProperStrand	302	chr15	79913295	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-0.9917
chr7	14458566	14458582	LINE	Lx3_Mus	L1	chr7Lx3_Mus14457463	NonProperStrand	5	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-13.7543
chr5	31508768	31508820	protein_coding	Ppm1g	exon	ENSMUSG00000029147	ProperStrand	69	chr5	121655052	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.4890
chr18	75160708	75160777	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	chr18	33954843	33954943	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	5	-3.8745
chr7	127987285	128001859	protein_coding	Eef2k	utr5	ENSMUSG00000035064	NonProperStrand	31	chrX	84483699	84483728	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-9.5782
chr3	66100724	66100740	protein_coding	Veph1	utr5	ENSMUSG00000027831	NonProperStrand	92	chr19	8798484	8798513	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-4.3891
chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	chr3	55987230	55987247	protein_coding	Nbea	utr5	ENSMUSG00000027799	NonProperStrand	115	1	-7.7650
chr11	69416290	69416338	protein_coding	Atp1b2	exon	ENSMUSG00000041329	ProperStrand	28	chr5	130300494	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.8897
chr10	7399284	7399300	protein_coding	Pcmt1	intron	ENSMUSG00000019795	NonProperStrand	4	chr10	80643336	80643570	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-11.7426
chr15	78259253	78259269	protein_coding	Kctd17	exon	ENSMUSG00000033287	NonProperStrand	26	chr7	117189863	117189922	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-7.8796
chr11	104286590	104286665	protein_coding	1700081L11Rik	utr5	ENSMUSG00000018412	ProperStrand	73	chr9	120038613	120038672	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.6926
chr4	41071224	41071241	protein_coding	Nol6	exon	ENSMUSG00000028430	ProperStrand	98	chr9	15119383	15119425	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-4.1689
chr10	57931928	57931976	protein_coding	Ranbp2	intron	ENSMUSG00000003226	ProperStrand	52	chr11	4985938	4986050	protein_coding	Ewsr1	exon	ENSMUSG00000009079	ProperStrand	248	1	-10.7561
chr6	38541326	38541416	protein_coding	Luc7l2	exon	ENSMUSG00000029823	ProperStrand	85	chr16	23110902	23110993	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	7	-3.7457
chr15	98428804	98428820	protein_coding	Adcy6	exon	ENSMUSG00000022994	ProperStrand	50	chr5	92485402	92487081	protein_coding	G3bp2	exon	ENSMUSG00000029405	ProperStrand	78	2	-19.5725
chr19	55142845	55142903	protein_coding	Gpam	utr3	ENSMUSG00000024978	ProperStrand	19	chr16	23110965	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.7016
chr2	25105896	25107254	protein_coding	Ndor1	exon	ENSMUSG00000006471	NonProperStrand	84	chr11	77996588	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-5.4326
chr10	117412171	117412190	LTR	MER21B	ERV1	chr10MER21B117412104	ProperStrand	1	chr5	108334194	108334243	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-inf
chr8	87200044	87200102	protein_coding	Nacc1	exon	ENSMUSG00000001910	ProperStrand	130	chr9	120038554	120038587	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	3	-4.9260
chr9	106117475	106117545	protein_coding	Twf2	utr3	ENSMUSG00000023277	ProperStrand	10	chr9	120039580	120039670	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	3	-15.9040
chr8	86454139	86454869	protein_coding	Lphn1	exon	ENSMUSG00000013033	ProperStrand	221	chr9	64143799	64143874	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-5.2049
chr14	65503128	65503144	protein_coding	Hmbox1	intron	ENSMUSG00000021972	NonProperStrand	17	chr2	132641987	132642087	protein_coding	Mcm8	utr5	ENSMUSG00000027353	ProperStrand	4	3	-inf
chr7	5062341	5062361	protein_coding	Rfpl4	exon	ENSMUSG00000035191	NonProperStrand	27	chr4	131908687	131908735	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.4692
chr2	180445441	180445531	protein_coding	2310003C23Rik	intron	ENSMUSG00000027573	ProperStrand	25	chr7	3603446	3603526	protein_coding	Cnot3	exon	ENSMUSG00000035632	ProperStrand	55	3	-19.4893
chr16	30338725	30339759	protein_coding	Atp13a3	exon	ENSMUSG00000022533	ProperStrand	45	chr9	111021129	111021147	protein_coding	Lrrfip2	intron	ENSMUSG00000032497	ProperStrand	28	2	-19.4244
chr10	89103755	89103828	protein_coding	Scyl2	exon	ENSMUSG00000069539	ProperStrand	7	chr18	35714262	35714290	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-7.7147
chr19	8799022	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	chr2	130101241	130101280	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	2	-0.9030
chr3	107134133	107134167	protein_coding	Rbm15	exon	ENSMUSG00000048109	ProperStrand	82	chr5	130300476	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-3.6023
chrX	51000238	51009214	antisense	AW822252	.	ENSMUSG00000085998	NonProperStrand	1	chr11	62416602	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-inf
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr1	145626114	145626192	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-4.5218
chr2	90235292	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr10	62708829	62726824	protein_coding	Herc4	exon	ENSMUSG00000020064	ProperStrand	14	4	-inf
chr7	63147400	63147477	protein_coding	Cyfip1	exon	ENSMUSG00000030447	ProperStrand	23	chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	1	-10.5302
chr1	64781148	64781189	protein_coding	Fzd5	utr3	ENSMUSG00000045005	ProperStrand	175	chr2	22444725	22444826	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-5.6620
chr9	120039890	120039980	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	chr8	13876097	13876177	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	2	-5.9345
chr12	102155028	102155068	protein_coding	Ccdc88c	exon	ENSMUSG00000021182	ProperStrand	151	chr19	8799859	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-3.2151
chr14	105576170	105576256	protein_coding	Rbm26	utr5	ENSMUSG00000022119	ProperStrand	60	chr2	28936374	28936464	protein_coding	Ttf1	intron	ENSMUSG00000026803	ProperStrand	15	1	-16.1379
chr11	76758399	76758416	protein_coding	Blmh	intron	ENSMUSG00000020840	ProperStrand	70	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-7.6598
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr9	58547119	58547136	protein_coding	2410076I21Rik	intron	ENSMUSG00000074269	ProperStrand	91	1	-6.9664
chr2	26241137	26241231	protein_coding-noncoding	Sdccag3	utr3	ENSMUSG00000026927	ProperStrand	4	chr2	26768382	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	4	-inf
chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	chr6	71851254	71851271	protein_coding	Ptcd3	exon	ENSMUSG00000063884	ProperStrand	34	1	-9.2512
chr6	91937791	91939155	protein_coding	Fgd5	exon	ENSMUSG00000034037	ProperStrand	38	chr7	116663633	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	10	-inf
chr3	97817679	97851652	protein_coding	Notch2	exon	ENSMUSG00000027878	ProperStrand	86	chr11	35853255	35853271	protein_coding	Odz2	exon	ENSMUSG00000049336	ProperStrand	106	1	-11.4464
chr13	56962398	56962414	protein_coding	Trpc7	exon	ENSMUSG00000021541	ProperStrand	50	chr19	8800354	8800484	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-3.8690
chr7	71523725	71525826	protein_coding	Mphosph10	exon	ENSMUSG00000030521	NonProperStrand	6	chr19	8963034	8963082	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-6.7266
chr5	31379139	31379239	protein_coding	Cad	exon	ENSMUSG00000013629	ProperStrand	260	chr4	134196926	134196945	protein_coding	Man1c1	intron	ENSMUSG00000037306	ProperStrand	22	1	-12.4065
chr12	109460710	109460726	protein_coding	Ccdc85c	intron	ENSMUSG00000084883	ProperStrand	157	chr3	108357359	108357459	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-2.7689
chr3	157199311	157199347	protein_coding	Zranb2	exon	ENSMUSG00000028180	ProperStrand	43	chr1	181027187	181027205	protein_coding	Smyd3	intron	ENSMUSG00000055067	ProperStrand	231	1	-11.2825
chr5	109058496	109058512	protein_coding	Gak	intron	ENSMUSG00000062234	ProperStrand	33	chr3	108357487	108357534	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-5.7036
chr7	29783473	29783509	protein_coding	Map4k1	exon	ENSMUSG00000037337	ProperStrand	31	chr2	26493364	26493448	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-5.0039
chr9	65044377	65044500	snRNA	ENSMUSG00000075763_U5	.	ENSMUSG00000075763	ProperStrand	216	chr8	73419657	73419757	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-2.1331
chr9	110124487	110124559	protein_coding	Smarcc1	exon	ENSMUSG00000032481	ProperStrand	108	chr11	62416635	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-4.0420
chr10	119286688	119286704	protein_coding	Grip1	intron	ENSMUSG00000034813	ProperStrand	38	chr5	87680856	87680872	protein_coding	Ugt2b37	exon	ENSMUSG00000057425	NonProperStrand	30	1	-15.6744
chr2	158185581	158185655	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr1	145626083	145626173	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-2.2990
chr8	13876096	13876210	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	chr7	52381719	52381755	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-1.8193
chrX	57928745	57928835	antisense	Gm14661	.	ENSMUSG00000067835	NonProperStrand	2	chrX	57908326	57908406	antisense	Gm14661	.	ENSMUSG00000067835	ProperStrand	9	1	-inf
chr5	108931593	108931635	protein_coding	Pcgf3	utr3	ENSMUSG00000033623	ProperStrand	17	chr7	116663634	116663727	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	6	-inf
chr2	104504974	104504991	protein_coding	Cstf3	exon	ENSMUSG00000027176	ProperStrand	19	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-7.4875
chr3	88333459	88333553	Simple_repeat	(CAGA)n	Simple_repeat	chr3(CAGA)n88333469	NonProperStrand	4	chr4	43562367	43562394	protein_coding	Tln1	exon	ENSMUSG00000028465	ProperStrand	101	4	-inf
chr2	5824081	5825006	protein_coding	Dhtkd1	exon	ENSMUSG00000025815	ProperStrand	46	chr11	6519810	6519926	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	7	-inf
chrX	64615813	64615903	LINE	L1Md_F2	L1	chrXL1Md_F264615362	ProperStrand	1	chrX	91836053	91836143	LINE	L1Md_F2	L1	chrXL1Md_F291835833	ProperStrand	1	1	-inf
chr8	104510035	104510052	LINE	L1_Rod	L1	chr8L1_Rod104509928	NonProperStrand	26	chr11	69466300	69466367	protein_coding	Fxr2	utr3	ENSMUSG00000018765	ProperStrand	40	2	-inf
chrX	148461217	148462240	protein_coding	Smc1a	exon	ENSMUSG00000041133	ProperStrand	104	chr16	23110467	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.5791
chr10	126636836	126636852	lincRNA	F420014N23Rik	intron	ENSMUSG00000086597	ProperStrand	2	chr6	93742378	93742394	protein_coding	Magi1	exon	ENSMUSG00000045095	ProperStrand	106	1	-20.1541
chr5	126150083	126150100	protein_coding	Tmem132b	intron	ENSMUSG00000070498	ProperStrand	6	chr1	162965531	162965564	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-7.8657
chr1	88247778	88247880	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	chr16	23109034	23109090	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	3	-1.5347
chr2	89143300	89143317	protein_coding	Olfr1231	exon	ENSMUSG00000075093	ProperStrand	1	chr4	116875137	116875249	snRNA	ENSMUSG00000070228_U5	.	ENSMUSG00000070228	ProperStrand	131	1	-inf
chr14	79625519	79625536	protein_coding	Zfp957	intron	ENSMUSG00000071262	NonProperStrand	4	chr9	120039626	120039665	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-8.8220
chr8	8835225	8835242	SINE	B3A	B2	chr8B3A8835179	NonProperStrand	1	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr10	79695187	79695223	protein_coding	Mum1	exon	ENSMUSG00000020156	ProperStrand	19	chr4	131865884	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-9.4466
chr15	101904822	101923599	protein_coding	Eif4b	exon	ENSMUSG00000058655	ProperStrand	484	chr18	35716688	35716854	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	7	-2.3031
chr12	87758472	87758490	protein_coding	Esrrb	intron	ENSMUSG00000021255	ProperStrand	254	chr1	162965980	162965998	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-1.2239
chr2	25312429	25313191	protein_coding	Clic3	exon	ENSMUSG00000015093	ProperStrand	79	chr1	93263065	93263081	protein_coding	Fam132b	exon	ENSMUSG00000047443	NonProperStrand	98	1	-11.7748
chr11	14961829	14961849	LINE	Lx	L1	chr11Lx14961726	ProperStrand	93	chr13	9833580	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	1	-4.1170
chr1	95213925	95213972	protein_coding-noncoding	Pask	utr3	ENSMUSG00000026274	ProperStrand	2	chr7	116663703	116663767	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-inf
chr7	13510770	13510787	protein_coding	Rps5	exon	ENSMUSG00000012848	ProperStrand	108	chr2	153192681	153192718	protein_coding	Asxl1	intron	ENSMUSG00000042548	ProperStrand	76	3	-19.7977
chr16	22009734	22009765	protein_coding	Senp2	exon	ENSMUSG00000022855	ProperStrand	13	chr13	54784163	54784217	protein_coding	Rnf44	exon	ENSMUSG00000034928	ProperStrand	90	1	-15.6196
chr2	172266148	172266166	protein_coding	2410001C21Rik	utr5	ENSMUSG00000027502	ProperStrand	8	chr12	53017221	53019633	protein_coding	Heatr5a	exon	ENSMUSG00000035181	ProperStrand	21	3	-18.7478
chr17	66466607	66468425	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	chr18	35716765	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-1.4801
chr14	22488559	22488659	protein_coding	Myst4	exon	ENSMUSG00000021767	ProperStrand	151	chr8	73419657	73419729	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-2.9580
chr1	84757612	84757696	protein_coding	Trip12	exon	ENSMUSG00000026219	ProperStrand	248	chr6	124691242	124691303	protein_coding	Grcc10	utr5	ENSMUSG00000072772	ProperStrand	88	3	-19.3283
chr11	83852008	83852046	protein_coding	Synrg	intron	ENSMUSG00000034940	ProperStrand	49	chr7	29136536	29136633	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.7131
chr3	38353129	38353173	protein_coding	Ankrd50	exon	ENSMUSG00000044864	ProperStrand	36	chr1	162965534	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.2292
chr15	76578300	76578338	protein_coding	Arhgap39	intron	ENSMUSG00000033697	ProperStrand	29	chr15	79913284	79913346	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.9774
chr11	106078779	106078860	protein_coding	Ddx42	intron	ENSMUSG00000020705	ProperStrand	26	chr19	8799841	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-6.5948
chr9	21474059	21474960	protein_coding	Smarca4	exon	ENSMUSG00000032187	ProperStrand	196	chr5	130295416	130295506	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	5	-13.2558
chr4	32108265	32108333	protein_coding	Map3k7	utr3	ENSMUSG00000028284	ProperStrand	16	chr11	62416614	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-7.8033
chr9	70224401	70224418	protein_coding	Myo1e	exon	ENSMUSG00000032220	ProperStrand	36	chr10	23506294	23506348	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-7.9685
chr18	66618531	66618549	protein_coding	Pmaip1	intron	ENSMUSG00000024521	NonProperStrand	3	chr1	162965980	162966045	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-16.4175
chr14	73863667	73863683	SINE	B3A	B2	chr14B3A73863640	NonProperStrand	3	chr19	56663397	56663446	protein_coding	Nhlrc2	intron	ENSMUSG00000025078	ProperStrand	38	1	-20.2606
chr11	70795682	70795737	protein_coding	C1qbp	exon	ENSMUSG00000018446	ProperStrand	46	chr4	122968679	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-6.8076
chr4	119958089	119958189	protein_coding	Foxo6	intron	ENSMUSG00000052135	ProperStrand	31	chr18	33954922	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-4.7567
chr4	99577397	99577413	protein_coding	Itgb3bp	intron	ENSMUSG00000028549	ProperStrand	55	chr16	23111389	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.3807
chr12	86560771	86560787	protein_coding	Eif2b2	exon	ENSMUSG00000004788	NonProperStrand	2	chr7	51505838	51505900	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	NonProperStrand	2	1	-inf
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr5	111112369	111112908	protein_coding	Ep400	exon	ENSMUSG00000029505	ProperStrand	176	1	-4.2825
chr4	125869242	125869267	protein_coding	Thrap3	intron	ENSMUSG00000043962	ProperStrand	84	chr3	20238638	20238656	protein_coding	Agtr1b	intron	ENSMUSG00000054988	NonProperStrand	39	1	-13.5054
chr18	75554796	75554819	protein_coding	Smad7	utr3	ENSMUSG00000025880	ProperStrand	83	chr16	23111450	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-1.7192
chr2	31332481	31334520	protein_coding	Ass1	exon	ENSMUSG00000076441	ProperStrand	29	chr4	131908809	131908885	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.3468
chr17	28736396	28736414	protein_coding	Srpk1	intron	ENSMUSG00000004865	NonProperStrand	1	chr1	162967751	162967806	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	1	-inf
chr16	28600026	28600068	miRNA	Mir690	.	ENSMUSG00000076064	ProperStrand	1	chr7	151020901	151020993	protein_coding	Dhcr7	intron	ENSMUSG00000058454	ProperStrand	30	1	-inf
chr1	193916097	193916114	protein_coding	Traf5	intron	ENSMUSG00000026637	ProperStrand	13	chr1	162968442	162968460	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-9.1648
chr6	125412184	125412350	protein_coding	Cd9	exon	ENSMUSG00000030342	ProperStrand	81	chr9	15119631	15119713	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-3.8135
chr17	45706225	45710217	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr5	130295413	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	3	-1.1063
chr11	99283266	99283282	protein_coding	Krt12	exon	ENSMUSG00000020912	ProperStrand	10	chr5	121655099	121655153	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-7.2897
chr12	60774055	60774110	snoRNA	ENSMUSG00000077603_SNORA3	.	ENSMUSG00000077603	ProperStrand	185	chr18	35714144	35714234	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-1.5484
chrX	70237450	70237472	miRNA	Mir2137	.	ENSMUSG00000089357	ProperStrand	50	chr7	30231467	30231558	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	1	-9.2128
chr13	64303935	64303957	protein_coding	Cdc14b	intron	ENSMUSG00000033102	NonProperStrand	9	chr17	33961245	33961389	protein_coding	Rps28	exon	ENSMUSG00000067288	ProperStrand	52	1	-17.4178
chr16	17652281	17652816	protein_coding	Med15	exon	ENSMUSG00000012114	ProperStrand	24	chr11	6428089	6428169	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-8.1718
chr6	47748483	47748583	protein_coding	Pdia4	exon	ENSMUSG00000025823	ProperStrand	41	chr17	24857781	24857851	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	5	-13.2599
chr9	108110502	108110552	protein_coding	Dag1	exon	ENSMUSG00000039952	ProperStrand	54	chr18	35714252	35714284	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-3.6373
chr16	23111370	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	chr1	162965528	162966813	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	223	-8.8930
chr4	151701618	151701662	protein_coding	Rpl22	exon	ENSMUSG00000028936	ProperStrand	112	chr7	105600348	105600365	protein_coding	Gucy2d	exon	ENSMUSG00000074003	NonProperStrand	1	1	-inf
chr7	16534823	16534839	protein_coding	Ehd2	utr3	ENSMUSG00000074364	NonProperStrand	197	chr17	39985112	39985190	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-3.6557
chrX	49970851	49970867	antisense	A630012P03Rik	.	ENSMUSG00000055110	NonProperStrand	10	chr19	5796072	5796100	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	1	-11.1985
chr4	33334996	33335086	protein_coding	Pnrc1	exon	ENSMUSG00000040128	ProperStrand	27	chr16	23111694	23111774	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.2801
chr7	140955173	140955199	protein_coding	Dhx32	intron	ENSMUSG00000030986	ProperStrand	100	chr11	6428060	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	4	-8.4520
chr12	85712439	85712466	protein_coding	Coq6	exon	ENSMUSG00000021235	ProperStrand	15	chr12	88778631	88778710	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	2	-14.7957
chr13	41922627	41922644	protein_coding	9530008L14Rik	intron	ENSMUSG00000058022	NonProperStrand	22	chr7	52381979	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-8.7270
chr11	68838086	68838186	protein_coding-noncoding	1500010J02Rik	utr5	ENSMUSG00000020898	ProperStrand	2	chr9	120038485	120038529	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-10.2959
chr16	23111377	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	chr5	108333573	108333665	snoRNA	ENSMUSG00000064453_Snord21	.	ENSMUSG00000064453	ProperStrand	201	8	-4.6384
chr3	65762111	65762128	protein_coding	Ccnl1	utr5	ENSMUSG00000027829	ProperStrand	29	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-7.2878
chr5	100072044	100072061	protein_coding	A930011G23Rik	intron	ENSMUSG00000089809	NonProperStrand	43	chr7	52382014	52382038	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-7.3754
chr3	135523711	135523728	protein_coding	Slc39a8	intron	ENSMUSG00000053897	NonProperStrand	19	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.4761
chr4	11977661	11977754	protein_coding	Tmem67	intron	ENSMUSG00000049488	ProperStrand	12	chr12	92811867	92811893	snoRNA	ENSMUSG00000080365_SNORA79	.	ENSMUSG00000080365	ProperStrand	642	1	-11.8497
chr9	4796009	4796029	protein_coding	Gria4	utr5	ENSMUSG00000025892	ProperStrand	20	chr2	32075202	32075668	protein_coding	Prrc2b	exon	ENSMUSG00000039262	ProperStrand	344	1	-12.0411
chr2	90235298	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	182745764	182745781	antisense	Gm16067	.	ENSMUSG00000073485	ProperStrand	25	1	-6.1754
chr8	87830156	87831489	protein_coding	Orc6	exon	ENSMUSG00000031697	ProperStrand	23	chr14	33005038	33005063	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	4	-17.6485
chr13	40816677	40816697	protein_coding	Tfap2a	exon	ENSMUSG00000021359	ProperStrand	49	chr1	63225598	63225656	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	2	-11.3800
chr7	53138430	53138449	protein_coding	Kdelr1	utr3	ENSMUSG00000002778	ProperStrand	7	chr2	178213311	178213329	protein_coding	Cdh26	intron	ENSMUSG00000039155	ProperStrand	3	1	-inf
chr11	96015203	96015230	protein_coding	Ttll6	intron	ENSMUSG00000038756	ProperStrand	5	chr11	68887040	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-9.2042
chr1	40350034	40350050	protein_coding	Il1r1	exon	ENSMUSG00000026072	NonProperStrand	3	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-15.3235
chr8	13416895	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr17	35088957	35089019	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	2	-0.8267
chr17	45708452	45708552	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr7	67125763	67125825	snoRNA	ENSMUSG00000089375_Snord107	.	ENSMUSG00000089375	ProperStrand	451	1	-2.8948
chr7	52679515	52679532	protein_coding	Ruvbl2	exon	ENSMUSG00000003868	ProperStrand	41	chr1	162967146	162967178	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	1	-9.4450
chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	chr15	5067335	5067637	protein_coding	Rpl37	exon	ENSMUSG00000041841	ProperStrand	69	1	-9.2990
chr5	37186473	37186512	protein_coding	Mrfap1	utr3	ENSMUSG00000055302	ProperStrand	62	chr4	131908810	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.1795
chr11	4795415	4795447	protein_coding	Thoc5	intron	ENSMUSG00000034274	ProperStrand	325	chr1	162967490	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-0.8274
chr14	76247753	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	chr7	127979010	127979043	tRNA	tRNA861-LeuTAG	.	73049	ProperStrand	49	4	-14.4828
chr15	36532634	36532724	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr7	5047287	5047499	protein_coding	Epn1	exon	ENSMUSG00000035203	ProperStrand	15	1	-10.6936
chr11	55296141	55296194	protein_coding	G3bp1	intron	ENSMUSG00000018583	ProperStrand	106	chr18	63109676	63109692	protein_coding	Apcdd1	exon	ENSMUSG00000071847	NonProperStrand	254	1	-9.2789
chr11	101306577	101306633	protein_coding	Rpl27	exon	ENSMUSG00000063316	ProperStrand	96	chr10	23505152	23505235	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-4.8638
chr2	89368462	89368478	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	chr4	116827858	116827892	snoRNA	ENSMUSG00000064751_SNORD46	.	ENSMUSG00000064751	ProperStrand	132	1	-8.7787
chr9	106786478	106786527	protein_coding	Rbm15b	utr3	ENSMUSG00000045365	ProperStrand	17	chr16	23110913	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-5.4260
chr13	9833569	9833658	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr7	52242524	52242596	lincRNA	Gm15545	exon	ENSMUSG00000087138	ProperStrand	2	1	-12.3538
chr6	148303498	148303588	protein_coding	Rps4y2	exon	ENSMUSG00000063171	ProperStrand	47	chr2	26493403	26493483	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-4.2020
chr12	29319073	29319112	protein_coding	Rps7	exon	ENSMUSG00000061477	ProperStrand	129	chr11	6519810	6519910	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	2	-10.3860
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr4	116827118	116827141	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-1.4823
chr6	38376346	38376403	protein_coding	Ttc26	utr3	ENSMUSG00000056832	ProperStrand	7	chr19	8798744	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-9.1562
chr10	16844327	16844346	LINE	L1_Mur1	L1	chr10L1_Mur116843303	ProperStrand	76	chr2	61549904	61549921	protein_coding	Psmd14	exon	ENSMUSG00000090649	NonProperStrand	2	1	-inf
chr6	90734763	90734819	protein_coding	Iqsec1	intron	ENSMUSG00000034312	ProperStrand	23	chr4	131908687	131908722	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.7500
chrX	103352563	103352580	protein_coding	Tlr13	exon	ENSMUSG00000033777	NonProperStrand	2	chr7	117189957	117190002	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-10.6222
mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr13	107737212	107737228	protein_coding	Dimt1	utr5	ENSMUSG00000021692	ProperStrand	185	2	-6.3201
chr15	85411908	85411925	protein_coding	Wnt7b	utr5	ENSMUSG00000022382	ProperStrand	21	chr6	83318070	83318086	protein_coding	Tet3	exon	ENSMUSG00000034832	NonProperStrand	93	1	-14.5618
chr11	77326639	77326656	protein_coding	Trp53i13	intron	ENSMUSG00000044328	ProperStrand	14	chr11	69481335	69481427	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-9.8612
chr2	142728866	142728882	antisense	4930511F01Rik	.	ENSMUSG00000086504	ProperStrand	1	chr18	35741315	35741340	protein_coding	Matr3	exon	ENSMUSG00000037236	ProperStrand	90	1	-inf
chr7	52309977	52309993	protein_coding	Prrg2	exon	ENSMUSG00000007837	NonProperStrand	281	chr5	58340514	58340534	protein_coding	Pcdh7	intron	ENSMUSG00000029108	ProperStrand	8	1	-14.3555
chr9	17606912	17606929	LINE	Lx5	L1	chr9Lx517605664	ProperStrand	6	chr2	26494708	26494830	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-7.6788
chr18	38015238	38015426	protein_coding	Diap1	exon	ENSMUSG00000024456	ProperStrand	77	chr17	35384176	35384193	snoRNA	ENSMUSG00000065273_SNORD83	.	ENSMUSG00000065273	ProperStrand	244	3	-inf
chr11	77345711	77345757	protein_coding	Taok1	utr3	ENSMUSG00000017291	ProperStrand	41	chr2	130324035	130324052	protein_coding	Ptpra	intron	ENSMUSG00000027303	NonProperStrand	2	1	-inf
chr10	80642805	80642924	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr12	60774055	60774107	snoRNA	ENSMUSG00000077603_SNORA3	.	ENSMUSG00000077603	ProperStrand	185	1	-3.9304
chr4	117317816	117317930	protein_coding	Eri3	intron	ENSMUSG00000033423	ProperStrand	246	chr7	117190016	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	7	-10.2069
chr2	90235287	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	25520052	25562487	protein_coding	Cacna1h	exon	ENSMUSG00000024112	ProperStrand	30	3	-13.5182
chr19	8799859	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	chr17	71990923	71990982	snoRNA	ENSMUSG00000092713_CT010429.1	.	ENSMUSG00000092713	ProperStrand	182	1	-2.8824
chr9	114421203	114421282	protein_coding	Trim71	utr3	ENSMUSG00000079259	ProperStrand	162	chr14	76247807	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-2.3820
chr5	111082719	111082737	protein_coding	Ddx51	exon	ENSMUSG00000029504	ProperStrand	54	chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	1	-9.7006
chr10	79283115	79283209	protein_coding	Palm	utr3	ENSMUSG00000035863	ProperStrand	58	chr11	68886976	68887033	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-4.2081
chr2	139772913	139772929	protein_coding	Tasp1	exon	ENSMUSG00000039033	NonProperStrand	7	chr6	71832606	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-9.9932
chr16	47446078	47446168	LINE	Lx2	L1	chr16Lx247446052	NonProperStrand	1	chr9	52427591	52427671	Simple_repeat	(TTCC)n	Simple_repeat	chr9(TTCC)n52427565	ProperStrand	1	1	-inf
chr12	37542834	37542859	miRNA	Mir5099	.	ENSMUSG00000092998	ProperStrand	13	chr17	24857767	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	5	-20.2366
chr2	83693562	83693578	protein_coding	Fam171b	exon	ENSMUSG00000048388	NonProperStrand	175	chr11	116299471	116299529	protein_coding	Fam100b	exon	ENSMUSG00000050628	ProperStrand	97	1	-10.2008
chr6	119028204	119028221	protein_coding	Cacna1c	intron	ENSMUSG00000051331	NonProperStrand	49	chr16	23110454	23110475	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-2.8132
chr8	97374230	97374247	protein_coding	Coq9	intron	ENSMUSG00000031782	NonProperStrand	11	chr14	52835733	52835924	protein_coding	Chd8	exon	ENSMUSG00000053754	ProperStrand	167	1	-14.7322
chr15	80790936	80790994	protein_coding	Adsl	exon	ENSMUSG00000022407	ProperStrand	11	chr16	23110829	23110919	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.6241
chr1	33834150	33834178	protein_coding	Zfp451	exon	ENSMUSG00000042197	ProperStrand	17	chr11	97642950	97643019	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.8122
chr7	87369758	87369848	protein_coding	Sema4b	exon	ENSMUSG00000030539	ProperStrand	54	chr9	120038553	120038633	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.2290
chr9	111592583	111592601	protein_coding	Stac	exon	ENSMUSG00000032502	ProperStrand	22	chr6	115758011	115758120	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-7.4682
chr5	148113281	148113297	protein_coding	Cdx2	utr3	ENSMUSG00000029646	ProperStrand	276	chr11	6519865	6519945	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-4.9419
chr16	23111694	23111826	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	chr7	52382234	52382315	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	9	-1.0824
chr7	13508344	13508365	protein_coding	Rps5	exon	ENSMUSG00000012848	ProperStrand	108	chr11	98855573	98855673	protein_coding	Top2a	exon	ENSMUSG00000020914	ProperStrand	324	1	-8.7564
chr11	119756252	119756308	protein_coding	Rptor	utr3	ENSMUSG00000025583	ProperStrand	76	chr2	144087375	144087437	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	1	-6.0789
chr18	75166468	75166507	protein_coding	BC031181	intron	ENSMUSG00000036299	ProperStrand	2	chr10	23505152	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-inf
chr19	42194678	42194694	protein_coding	Pi4k2a	utr3	ENSMUSG00000025178	ProperStrand	23	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-9.6726
chr1	194571764	194571802	snRNA	ENSMUSG00000064881_U5	.	ENSMUSG00000064881	ProperStrand	187	chr13	51743585	51743639	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	2	-7.6859
chr5	33370241	33370306	protein_coding	Ywhah	utr3	ENSMUSG00000018965	ProperStrand	81	chr8	23769774	23769859	protein_coding	Ikbkb	utr3	ENSMUSG00000031537	ProperStrand	11	1	-16.1466
chr4	123622874	123622964	LINE	Lx8	L1	chr4Lx8123622886	NonProperStrand	1	chr19	56652558	56652638	protein_coding	Nhlrc2	intron	ENSMUSG00000025078	ProperStrand	38	1	-inf
chr1	172127125	172127196	protein_coding	Uhmk1	utr3	ENSMUSG00000026667	ProperStrand	11	chr14	31829538	31829562	protein_coding	Gnl3	exon	ENSMUSG00000042354	ProperStrand	53	5	-21.8486
chr6	4940091	4940107	protein_coding	Ppp1r9a	intron	ENSMUSG00000032827	ProperStrand	50	chr1	89673652	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	2	-6.1157
chr10	127473546	127485616	protein_coding	Naca	utr3	ENSMUSG00000061315	ProperStrand	50	chr16	23110827	23110935	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-4.1222
chr11	16715466	16715556	antisense	E230015J15Rik	.	ENSMUSG00000085091	ProperStrand	1	chr11	16715349	16715439	protein_coding	Egfr	intron	ENSMUSG00000020122	NonProperStrand	4	1	-inf
chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	chr1	145626057	145626123	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-5.0615
chr11	95161413	95161515	protein_coding	Myst2	exon	ENSMUSG00000038909	ProperStrand	56	chr4	131908689	131908722	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-5.6909
chr10	80265563	80266220	protein_coding	Sf3a2	exon	ENSMUSG00000020211	ProperStrand	50	chr18	33954877	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-3.8442
chrX	7508167	7508267	protein_coding	Hdac6	exon	ENSMUSG00000031161	ProperStrand	42	chr7	52381972	52382018	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-7.4225
chr13	99024999	99027077	protein_coding	Utp15	exon	ENSMUSG00000041747	ProperStrand	19	chr9	120038000	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-6.9787
chr10	41170946	41171036	protein_coding	Zbtb24	exon	ENSMUSG00000019826	ProperStrand	17	chr4	131865896	131865976	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.9909
chr17	4082147	4082232	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr2	63936035	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-4.5863
chr5	74594490	74594540	protein_coding	Rasl11b	exon	ENSMUSG00000049907	ProperStrand	4	chr1	162965554	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-14.4538
chr4	140563265	140563355	LTR	RLTR10C	ERVK	chr4RLTR10C140563264	NonProperStrand	1	chr3	118937901	118937991	protein_coding	Dpyd	intron	ENSMUSG00000033308	NonProperStrand	12	1	-inf
chr7	151765212	151765228	antisense	Gm10574	.	ENSMUSG00000073778	ProperStrand	357	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-6.8730
chr15	45129516	45129606	LINE	L1_Mus2	L1	chr15L1_Mus245129537	ProperStrand	1	chr15	45129376	45129466	SINE	B1_Mus2	Alu	chr15B1_Mus245129390	ProperStrand	1	1	-inf
chr12	92796105	92796187	protein_coding	Gtf2a1	utr3	ENSMUSG00000020962	ProperStrand	61	chr1	162967519	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-3.4440
chr12	77381712	77390420	protein_coding	Mthfd1	exon	ENSMUSG00000021048	ProperStrand	71	chr2	26493369	26493484	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	6	-18.1582
chr7	150710235	150710262	protein_coding	Nap1l4	intron	ENSMUSG00000059119	ProperStrand	31	chrX	34622977	34623037	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	3	-10.6471
chr2	165958255	165958351	protein_coding	Sulf2	utr5	ENSMUSG00000006800	ProperStrand	171	chr9	120038637	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-1.3396
chr12	113971603	113971633	protein_coding	AW555464	exon	ENSMUSG00000072825	ProperStrand	96	chr16	23111759	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-2.3339
chr2	93044455	93044471	protein_coding	Tspan18	utr3	ENSMUSG00000027217	NonProperStrand	14	chr4	131865855	131865913	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-7.3753
chr10	92712822	92717463	protein_coding	Elk3	exon	ENSMUSG00000008398	ProperStrand	9	chr4	131908719	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-7.7011
chr13	74617860	74617960	Unknown	MurSatRep1	Unknown	chr13MurSatRep174617783	ProperStrand	1	chr16	23111720	23111774	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-inf
chr12	56450970	56451001	protein_coding	1110008L16Rik	intron	ENSMUSG00000021023	ProperStrand	20	chr2	34533517	34533559	protein_coding	Gapvd1	utr3	ENSMUSG00000026867	ProperStrand	31	2	-18.9374
chr15	77795359	77796581	protein_coding	Eif3d	exon	ENSMUSG00000016554	ProperStrand	69	chr3	123210854	123210886	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.8430
chr9	56106080	56106151	protein_coding	C230081A13Rik	exon	ENSMUSG00000074305	ProperStrand	40	chr10	23505152	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.8310
chr8	41570003	41570019	protein_coding	Zdhhc2	utr3	ENSMUSG00000039470	NonProperStrand	85	chr5	121655029	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-3.1101
chr5	77384255	77384335	protein_coding	Paics	intron	ENSMUSG00000029247	ProperStrand	78	chr8	26641238	26641328	protein_coding	Fgfr1	intron	ENSMUSG00000091895	ProperStrand	16	1	-15.4917
chr11	104287754	104328979	protein_coding	1700081L11Rik	utr5	ENSMUSG00000018412	ProperStrand	73	chr6	125055321	125056433	protein_coding	Chd4	exon	ENSMUSG00000063870	ProperStrand	303	5	-21.2506
chr11	51808537	51813915	protein_coding	Ube2b	utr5	ENSMUSG00000020390	ProperStrand	57	chr10	23505151	23505282	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-3.9596
chr17	35089133	35089228	processed_transcript	1110038B12Rik	.	ENSMUSG00000092203	ProperStrand	126	chr10	95499367	95499383	protein_coding	Eea1	utr3	ENSMUSG00000036499	ProperStrand	82	1	-11.1957
chr7	136800631	136800649	SINE	RSINE1	B4	chr7RSINE1136800606	ProperStrand	216	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	4	-2.0196
chr1	120528952	120548885	protein_coding	Tfcp2l1	exon	ENSMUSG00000026380	ProperStrand	158	chr16	23110453	23110559	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.0045
chr5	139747924	139748015	protein_coding	Adap1	utr3	ENSMUSG00000056413	ProperStrand	16	chr7	35502297	35502314	protein_coding	Chst8	intron	ENSMUSG00000060402	ProperStrand	4	1	-inf
chr3	96218566	96218615	misc_RNA	Telomerase-vert	.	ENSMUSG00000064796	ProperStrand	443	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-3.1544
chr1	84790700	84790836	protein_coding	Trip12	exon	ENSMUSG00000026219	ProperStrand	248	chr17	24665462	24665482	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-2.3450
chr3	127130210	127130300	SINE	B2_Mm2	B2	chr3B2_Mm2127130182	ProperStrand	1	chr3	127130539	127130629	SINE	B3	B2	chr3B3127130410	ProperStrand	1	1	-inf
chr14	27762732	27762751	protein_coding	Appl1	exon	ENSMUSG00000040760	ProperStrand	42	chr2	158184093	158184197	snoRNA	ENSMUSG00000064995_SNORA71	.	ENSMUSG00000064995	ProperStrand	430	1	-10.0873
chr16	36034751	36034803	protein_coding	Kpna1	utr3	ENSMUSG00000022905	ProperStrand	38	chr3	86591555	86591655	protein_coding	Dclk2	intron	ENSMUSG00000028078	ProperStrand	50	1	-14.6049
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr8	74446729	74446745	protein_coding	Zfp617	intron	ENSMUSG00000066880	NonProperStrand	208	2	-11.0900
chr4	126241214	126242178	protein_coding	Clspn	exon	ENSMUSG00000042489	ProperStrand	89	chr15	34370566	34370671	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-2.8376
chr19	32786580	32786599	protein_coding	Atad1	intron	ENSMUSG00000013662	ProperStrand	14	chr17	29108616	29108668	protein_coding	Stk38	utr3	ENSMUSG00000024006	ProperStrand	57	1	-16.3613
chr16	56034964	56034980	protein_coding	Rg9mtd1	exon	ENSMUSG00000044763	ProperStrand	2	chr15	34372458	34372489	protein_coding	Rpl30	exon	ENSMUSG00000058600	ProperStrand	65	1	-inf
chrX	72376262	72376278	protein_coding	Mpp1	utr5	ENSMUSG00000031402	NonProperStrand	12	chr14	33005107	33005138	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-7.1733
chr6	122677900	122689957	protein_coding	Slc2a3	exon	ENSMUSG00000003153	ProperStrand	682	chr11	69483135	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	23	-18.9460
chr4	132867631	132867671	protein_coding	Wdtc1	intron	ENSMUSG00000037622	ProperStrand	81	chr14	76247753	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-3.6106
chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	chr10	127521199	127521271	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	1	-4.1718
chr11	16097229	16097319	LINE	Lx7	L1	chr11Lx716096782	NonProperStrand	1	chr11	16097428	16097518	LINE	Lx7	L1	chr11Lx716097334	NonProperStrand	1	1	-inf
chr1	88247741	88247794	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	chr2	130103752	130103779	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	1	-0.9831
chr3	146093916	146094016	protein_coding	Ssx2ip	exon	ENSMUSG00000036825	ProperStrand	19	chr5	130295493	130295549	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-7.5370
chr17	75690723	75690739	protein_coding	Ltbp1	exon	ENSMUSG00000001870	ProperStrand	136	chr18	35716684	35716760	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-0.9735
chr5	145865706	145867914	protein_coding	Arpc1a	exon	ENSMUSG00000029621	ProperStrand	19	chr9	120037958	120038054	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	5	-19.1752
chr1	162968475	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	chr4	122970404	122970466	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-0.9500
chr11	120424074	120424561	protein_coding	P4hb	exon	ENSMUSG00000025130	ProperStrand	83	chr4	131866203	131866292	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-3.0731
chr2	24739788	24739804	protein_coding	Ehmt1	exon	ENSMUSG00000036893	NonProperStrand	16	chr17	35089183	35089227	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-8.1303
chr17	13116459	13116483	protein_coding	Tcp1	exon	ENSMUSG00000068039	ProperStrand	116	chr14	76372291	76372411	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	3	-17.2863
chr17	34022845	34023568	protein_coding	Kifc1	exon	ENSMUSG00000079553	ProperStrand	47	chr16	17205909	17205958	snRNA	ENSMUSG00000065710_U6	.	ENSMUSG00000065710	ProperStrand	3	1	-inf
chr5	74489270	74489328	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr1	55138540	55138581	protein_coding	Hspd1	exon	ENSMUSG00000025980	ProperStrand	140	1	-3.9951
chr14	56515508	56515526	protein_coding	Khnyn	utr3	ENSMUSG00000047153	NonProperStrand	2	chr8	129468746	129468796	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-11.7864
chr7	52753773	52753805	protein_coding	Nucb1	exon	ENSMUSG00000030824	ProperStrand	49	chrX	71517837	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-6.9477
chr9	78327880	78328068	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr12	81492598	81492633	snoRNA	ENSMUSG00000088158_Scarna3b	.	ENSMUSG00000088158	ProperStrand	147	1	-4.5908
chr11	78355955	78356051	protein_coding	Tmem97	utr3	ENSMUSG00000037278	ProperStrand	35	chr4	153647935	153647983	protein_coding	Megf6	exon	ENSMUSG00000057751	ProperStrand	23	12	-19.1064
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	1	-4.4461
chr11	100414998	100415014	protein_coding	Ttc25	exon	ENSMUSG00000006784	NonProperStrand	119	chr4	140278396	140278442	protein_coding	Rcc2	utr3	ENSMUSG00000040945	ProperStrand	228	1	-9.2630
chr5	92485085	92485105	pseudogene	Gm15710	.	ENSMUSG00000084111	ProperStrand	28	chr5	121655016	121655096	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-5.2085
chr11	55296275	55296317	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	chr16	23109034	23109090	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	2	-1.8540
chr2	181655793	181655883	LTR	RLTR6-int	ERV1	chr2RLTR6-int181654564	ProperStrand	1	chr16	23110887	23110967	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr2	168592501	168592517	lincRNA	Gm14261	exon	ENSMUSG00000085322	ProperStrand	1	chr19	8963030	8963130	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-inf
chr16	89813232	89813269	protein_coding	Tiam1	exon	ENSMUSG00000002489	ProperStrand	80	chr11	6428085	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.6817
chr1	64782206	64782254	protein_coding	Fzd5	exon	ENSMUSG00000045005	ProperStrand	175	chr7	116664850	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-0.9417
chr2	90235315	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	21823257	21823273	protein_coding	Elavl3	exon	ENSMUSG00000003410	NonProperStrand	137	2	-5.0791
chr4	43510566	43510832	protein_coding	E130306D19Rik	exon	ENSMUSG00000051517	NonProperStrand	1	chr11	35487086	35487104	protein_coding	Slit3	intron	ENSMUSG00000056427	NonProperStrand	45	1	-inf
chr19	5370068	5370106	protein_coding	Eif1ad	utr3	ENSMUSG00000024841	ProperStrand	4	chr16	23110876	23110917	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.6489
chr2	90235307	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	92440258	92440274	protein_coding	Plod2	intron	ENSMUSG00000032374	ProperStrand	52	1	-4.7373
chr9	78023144	78023243	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr15	5068573	5068626	protein_coding	Rpl37	exon	ENSMUSG00000041841	ProperStrand	69	1	-5.6038
chr8	98239840	98239956	protein_coding	Setd6	exon	ENSMUSG00000031671	ProperStrand	35	chr11	69481343	69481459	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-7.0552
chr8	68920365	68920387	protein_coding	March1	intron	ENSMUSG00000036469	NonProperStrand	14	chr2	130101984	130102050	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-8.2730
chr14	51427119	51427185	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr2	27303616	27303634	protein_coding	Brd3	utr3	ENSMUSG00000026918	ProperStrand	85	2	-10.5347
chr8	129468841	129468921	protein_coding	Tomm20	intron	ENSMUSG00000058779	ProperStrand	55	chr16	33726813	33726903	protein_coding	Heg1	exon	ENSMUSG00000075254	ProperStrand	19	1	-15.7851
chr7	26080090	26080198	protein_coding	Pafah1b3	utr3	ENSMUSG00000005447	ProperStrand	4	chr3	95980360	95980410	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-12.5151
chr2	24825186	24827046	protein_coding	Wdr85	exon	ENSMUSG00000026975	ProperStrand	323	chr17	24665420	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-1.9149
chr17	24856728	24856763	antisense	Snhg9	.	ENSMUSG00000090101	ProperStrand	218	chr9	15118323	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	3	-3.9803
chr10	84985225	84985312	protein_coding	Btbd11	intron	ENSMUSG00000020042	NonProperStrand	8	chr7	116663672	116663713	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-6.3908
chr4	43505703	43505895	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr17	37140357	37140382	protein_coding-noncoding	Zfp57	utr5	ENSMUSG00000036036	ProperStrand	27	27	-inf
chr13	55755831	55755847	protein_coding	Ddx46	intron	ENSMUSG00000021500	ProperStrand	87	chr2	158451026	158451043	protein_coding	Actr5	exon	ENSMUSG00000037761	NonProperStrand	94	1	-11.6634
chr12	71146391	71146407	protein_coding	Nin	exon	ENSMUSG00000021068	ProperStrand	95	chr18	73693165	73693189	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	2	-7.6836
chr8	129468746	129468868	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	chr11	83107804	83107903	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	3	-2.6338
chr9	118490924	118490993	protein_coding	Golga4	utr3	ENSMUSG00000038708	ProperStrand	95	chr15	79908939	79908959	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-4.5840
chr10	13562823	13562840	protein_coding	Aig1	intron	ENSMUSG00000019806	ProperStrand	49	chr9	120038466	120038531	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.4063
chr6	51419758	51419775	protein_coding	Hnrnpa2b1	utr5	ENSMUSG00000004980	NonProperStrand	4	chr19	8963086	8963178	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-7.6308
chr17	47092813	47092842	protein_coding	Ubr2	exon	ENSMUSG00000023977	ProperStrand	172	chr18	82662186	82662202	protein_coding	Mbp	intron	ENSMUSG00000041607	NonProperStrand	185	1	-8.9442
chr19	21931181	21931271	protein_coding	Tmem2	utr3	ENSMUSG00000024754	ProperStrand	133	chr19	8963091	8963171	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.0820
chr4	12951683	12951773	Simple_repeat	(GA)n	Simple_repeat	chr4(GA)n12951640	NonProperStrand	1	chr5	108336937	108337017	protein_coding	Rpl5	utr3	ENSMUSG00000058558	ProperStrand	235	1	-inf
chr8	98269959	98270052	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	chr5	108334195	108334309	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	6	-0.6967
chr1	24620959	24621000	protein_coding	Gm10925	utr3	ENSMUSG00000090378	ProperStrand	320	chr7	52382752	52382814	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-3.5314
chrX	12671178	12671244	protein_coding	Usp9x	utr5	ENSMUSG00000031010	ProperStrand	174	chr1	69003452	69003470	protein_coding	Erbb4	intron	ENSMUSG00000062209	NonProperStrand	6	1	-15.9151
chr15	79192474	79192513	protein_coding	Tmem184b	utr3	ENSMUSG00000009035	ProperStrand	37	chr10	23505165	23505195	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-3.5654
chr15	39703954	39704011	protein_coding	Lrp12	exon	ENSMUSG00000022305	ProperStrand	11	chr4	131908236	131908328	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-4.3989
chr12	56945454	56945470	protein_coding	Brms1l	exon	ENSMUSG00000012076	ProperStrand	9	chr11	77993450	77993466	protein_coding	Tlcd1	exon	ENSMUSG00000019437	ProperStrand	4	1	-19.7249
chr16	20203758	20203848	protein_coding	Yeats2	exon	ENSMUSG00000041215	ProperStrand	21	chrX	34622956	34623036	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-5.1646
chr4	135476682	135476728	protein_coding	Fuca1	utr5	ENSMUSG00000028673	ProperStrand	16	chr4	131866172	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-6.2370
chr19	7095415	7095485	protein_coding	Stip1	utr3	ENSMUSG00000024966	ProperStrand	100	chr7	117166761	117166851	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	3	-9.4075
chr8	101914902	101914919	protein_coding	Cdh8	intron	ENSMUSG00000036510	ProperStrand	12	chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-6.3129
chr2	130101972	130102075	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	NonProperStrand	12	chr16	23110908	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	NonProperStrand	93	1	-15.7126
chr17	24857228	24857274	protein_coding	Rps2	exon	ENSMUSG00000044533	NonProperStrand	5	chr8	98269959	98270073	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	NonProperStrand	11	1	-19.0787
chr2	38012954	38012970	protein_coding	Dennd1a	intron	ENSMUSG00000035392	NonProperStrand	128	chr5	135867504	135867548	protein_coding	Pom121	exon	ENSMUSG00000053293	ProperStrand	127	1	-10.2868
chr4	118955407	118955458	protein_coding	Ybx1	exon	ENSMUSG00000028639	ProperStrand	171	chr5	151755615	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-5.6708
chrX	147418664	147418700	protein_coding	Gnl3l	utr3	ENSMUSG00000025266	ProperStrand	52	chr3	58673399	58673415	protein_coding	Clrn1	intron	ENSMUSG00000043850	NonProperStrand	13	1	-16.7067
chr9	108849650	108849740	protein_coding	Uqcrc1	exon	ENSMUSG00000025651	ProperStrand	43	chr4	131865865	131865945	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.3073
chr19	41991197	41991223	protein_coding	Pgam1	exon	ENSMUSG00000011752	ProperStrand	124	chrX	34622906	34622929	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-1.9316
chr12	110044779	110051146	protein_coding	Yy1	exon	ENSMUSG00000021264	ProperStrand	31	chr4	131865887	131865967	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.8751
chr16	18240345	18240399	protein_coding	Ranbp1	intron	ENSMUSG00000005732	ProperStrand	22	chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	1	-11.8640
chr11	115448463	115449812	protein_coding	Gga3	exon	ENSMUSG00000020740	ProperStrand	44	chr4	131908689	131908855	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-4.8221
chr16	23111794	23111838	protein_coding	Eif4a2	intron	ENSMUSG00000022884	ProperStrand	356	chr12	17552947	17553056	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-1.8833
chrX	159209059	159210155	protein_coding	Rbbp7	exon	ENSMUSG00000031353	ProperStrand	48	chr15	79908939	79908956	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	3	-13.6542
chrX	98636958	98636977	protein_coding	Nono	exon	ENSMUSG00000031311	ProperStrand	102	chr11	97642952	97643021	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	2	-3.0003
chr1	102076759	102076793	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	chr16	23111706	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	5	-1.0883
chr15	72457219	72457293	protein_coding	Trappc9	intron	ENSMUSG00000047921	ProperStrand	44	chr9	120039580	120039670	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-3.8931
chr10	75359822	75360194	protein_coding	Smarcb1	exon	ENSMUSG00000000902	ProperStrand	109	chr8	13416896	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-5.2838
chr2	30745122	30745166	protein_coding	Ptges	utr3	ENSMUSG00000050737	ProperStrand	5	chr19	8963023	8963124	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	3	-17.2218
chr12	75033370	75033386	lincRNA	Gm15283	exon	ENSMUSG00000087700	ProperStrand	30	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-9.9899
chr17	34251962	34252633	protein_coding	Brd2	exon	ENSMUSG00000024335	ProperStrand	69	chr5	74489579	74489678	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	3	-8.7479
chr17	34747537	34747555	protein_coding	Agpat1	exon	ENSMUSG00000034254	NonProperStrand	39	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.0770
chr1	63104372	63104466	protein_coding	Ino80d	utr3	ENSMUSG00000040865	ProperStrand	70	chr7	117189957	117190023	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	10	-inf
chr18	36961598	36961662	misc_RNA	Vault	.	ENSMUSG00000065145	ProperStrand	177	chr17	35087907	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-3.1655
chr10	126622630	126622673	protein_coding	Arhgef25	exon	ENSMUSG00000019467	ProperStrand	12	chr18	35714143	35714257	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-6.5851
chr19	8976781	8976842	protein_coding	Ganab	exon	ENSMUSG00000071650	ProperStrand	145	chr2	166890796	166890836	snoRNA	ENSMUSG00000077698_Snord12	.	ENSMUSG00000077698	ProperStrand	259	4	-19.7105
chr15	36702286	36702316	protein_coding	Ywhaz	utr3	ENSMUSG00000022285	ProperStrand	73	chr10	85456343	85456359	protein_coding	Bpifc	intron	ENSMUSG00000050108	ProperStrand	17	1	-15.4859
chr11	103221001	103221017	antisense	Gm11647	.	ENSMUSG00000085360	ProperStrand	22	chr9	15118323	15118370	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-5.3884
chr1	180885279	181320425	protein_coding	Smyd3	intron	ENSMUSG00000055067	NonProperStrand	190	chr16	23111734	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-1.0022
chr10	80110561	80111337	protein_coding	Btbd2	exon	ENSMUSG00000003344	ProperStrand	68	chr2	32881629	32881645	protein_coding	Garnl3	exon	ENSMUSG00000038860	NonProperStrand	54	2	-20.2021
chr4	44045583	44045684	protein_coding	Clta	utr3	ENSMUSG00000028478	ProperStrand	59	chr4	131908236	131908295	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.4429
chr10	76516057	76516099	protein_coding	Col18a1	exon	ENSMUSG00000001435	ProperStrand	287	chr17	34740343	34740400	protein_coding	Rnf5	exon	ENSMUSG00000015478	ProperStrand	4	1	-15.8413
chrX	12537813	12537903	LINE	Lx7	L1	chrXLx712537694	NonProperStrand	1	chrX	12537963	12538043	LTR	ORR1A2	MaLR	chrXORR1A212537958	ProperStrand	1	1	-inf
chr15	103022653	103022715	protein_coding	Cbx5	utr3	ENSMUSG00000009575	ProperStrand	98	chr16	23110464	23110554	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-4.7685
chr5	28404603	28404703	protein_coding	Insig1	utr3	ENSMUSG00000045294	ProperStrand	35	chr19	8798741	8798796	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-5.8541
chr13	23960251	23960271	protein_coding	Slc17a1	intron	ENSMUSG00000021335	ProperStrand	2	chr16	23110911	23111002	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-inf
chr7	36388906	36389233	protein_coding	Ankrd27	exon	ENSMUSG00000034867	ProperStrand	132	chr1	88252838	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-5.0957
chr1	134465558	134465574	protein_coding	Nfasc	utr3	ENSMUSG00000026442	NonProperStrand	48	chr10	5990501	5990525	protein_coding	Akap12	utr3	ENSMUSG00000038587	ProperStrand	1008	1	-8.1221
chr7	13516158	13516211	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr13	103895241	103895257	protein_coding	Mast4	intron	ENSMUSG00000034751	ProperStrand	150	1	-6.8425
chr4	116875149	116875250	snRNA	ENSMUSG00000070228_U5	.	ENSMUSG00000070228	ProperStrand	131	chr16	23110456	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	4	-5.4128
chr6	91702328	91702397	protein_coding	Slc6a6	exon	ENSMUSG00000030096	ProperStrand	206	chr9	15118305	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	5	-7.7765
chr10	20080843	20080860	protein_coding	Fam54a	utr3	ENSMUSG00000019992	ProperStrand	232	chr12	106269458	106269558	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-1.7745
chr8	3204718	3211397	protein_coding	Insr	exon	ENSMUSG00000005534	ProperStrand	25	chr9	15118335	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	2	-8.4897
chr10	40791279	40791295	protein_coding	Gpr6	exon	ENSMUSG00000046922	ProperStrand	26	chr16	23110883	23110916	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.2392
chr2	98507407	98507487	Satellite	GSAT_MM	Satellite	chr2GSAT_MM98506701	ProperStrand	1	chr2	98507280	98507370	protein_coding	Gm10800	exon	ENSMUSG00000075014	NonProperStrand	12	1	-inf
chr9	78550959	78550976	protein_coding	Cd109	exon	ENSMUSG00000046186	NonProperStrand	36	chr1	162966812	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-7.2750
chr13	97312817	97312867	protein_coding	Col4a3bp	utr5	ENSMUSG00000021669	ProperStrand	3	chr15	34370545	34370607	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-9.7644
chr9	120037925	120038056	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	chr10	110918548	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	31	-4.0086
chr2	13496181	13496220	protein_coding	Vim	exon	ENSMUSG00000026728	ProperStrand	33	chr8	11317746	11317765	protein_coding	Col4a2	intron	ENSMUSG00000031503	ProperStrand	74	1	-14.0969
chr11	48615564	48615609	snoRNA	ENSMUSG00000064725_Snord96a	.	ENSMUSG00000064725	ProperStrand	89	chr19	8963027	8963085	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-3.0493
chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	chr7	52382256	52382314	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	2	-6.7893
chr2	129998643	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr14	33005105	33005237	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	5	-2.7468
chr11	68716790	68717925	protein_coding	Rpl26	exon	ENSMUSG00000060938	ProperStrand	130	chr8	32260356	32260436	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-3.1872
chr18	41356149	41356184	miRNA	Mir5097	dead	ENSMUSG00000093361	ProperStrand	221	chr8	73419875	73419911	protein_coding	Rpl18a	exon	ENSMUSG00000045128	ProperStrand	394	1	-6.9454
chr13	95223812	95223828	protein_coding	Ap3b1	intron	ENSMUSG00000021686	NonProperStrand	24	chr16	23110526	23110575	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-4.1305
chr15	89186202	89186282	protein_coding	Ncaph2	utr5	ENSMUSG00000008690	ProperStrand	65	chr9	98488014	98488244	protein_coding	Copb2	exon	ENSMUSG00000032458	ProperStrand	33	1	-14.3569
chr4	43015332	43015376	protein_coding	Fancg	utr3	ENSMUSG00000028453	ProperStrand	13	chr17	35087894	35087928	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-8.2652
chr1	33798967	33798990	protein_coding	Rab23	utr3	ENSMUSG00000004768	ProperStrand	7	chr17	24857740	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	4	-20.0447
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr9	55057284	55061717	protein_coding	Fbxo22	exon	ENSMUSG00000032309	ProperStrand	79	1	-7.2470
chr3	35725890	35725907	protein_coding	Atp11b	exon	ENSMUSG00000037400	NonProperStrand	18	chr4	124796957	124796975	protein_coding	Zc3h12a	exon	ENSMUSG00000042677	ProperStrand	37	1	-16.7409
chr6	127718662	127718680	protein_coding	Prmt8	intron	ENSMUSG00000030350	ProperStrand	8	chr11	68886971	68887033	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-8.1810
chr19	7053987	7054065	protein_coding	Fkbp2	intron	ENSMUSG00000056629	ProperStrand	18	chr10	39978371	39978461	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-7.8632
chr8	27251834	27251903	protein_coding	Rnf170	utr3	ENSMUSG00000013878	ProperStrand	8	chr11	97643025	97643115	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	1	-11.9858
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr11	94530109	94530758	protein_coding	Xylt2	exon	ENSMUSG00000020868	ProperStrand	65	1	-8.5554
chr4	131866614	131866676	snoRNA	ENSMUSG00000080615_Snord99	.	ENSMUSG00000080615	ProperStrand	491	chr13	23523336	23523356	tRNA	tRNA102-AlaAGC	.	1421553	ProperStrand	6	1	-13.8631
chr1	136525261	136527050	protein_coding	Kdm5b	exon	ENSMUSG00000042207	ProperStrand	223	chr17	24856620	24856675	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-3.8938
chr11	115467398	115467439	protein_coding	Mrps7	exon	ENSMUSG00000046756	ProperStrand	2	chr4	131908703	131908751	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-8.0336
chr2	93103441	93103521	protein_coding	Tspan18	intron	ENSMUSG00000027217	ProperStrand	4	chr2	91727941	91728031	protein_coding	Ambra1	intron	ENSMUSG00000040506	ProperStrand	65	1	-18.8568
chr7	54354044	54354061	protein_coding	Ptpn5	intron	ENSMUSG00000030854	ProperStrand	6	chr17	27559700	27559717	protein_coding	Grm4	utr3	ENSMUSG00000063239	ProperStrand	147	1	-16.2507
chr9	120038657	120038678	protein_coding	Rpsa	intron	ENSMUSG00000032518	ProperStrand	398	chr4	122970470	122970521	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-3.7476
chr2	53003875	53003891	protein_coding	Prpf40a	exon	ENSMUSG00000061136	ProperStrand	129	chr8	32260333	32260432	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	2	-5.4880
chr4	130491573	130491678	protein_coding	Laptm5	utr3	ENSMUSG00000028581	ProperStrand	34	chr11	62416629	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-6.2833
chr18	38003421	38003511	protein_coding	Diap1	utr3	ENSMUSG00000024456	ProperStrand	77	chr5	108334246	108334326	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-4.3422
chrX	34622961	34623020	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	chr8	113362444	113362491	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	2	-0.8155
chr9	65938512	65941026	protein_coding	Snx1	exon	ENSMUSG00000032382	ProperStrand	7	chr18	35716754	35716844	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-6.2708
chr5	64485819	64485836	protein_coding	Pgm1	intron	ENSMUSG00000029171	NonProperStrand	20	chr1	91827555	91827572	protein_coding	Gbx2	utr5	ENSMUSG00000034486	ProperStrand	18	1	-17.7123
chr5	116010886	116013482	protein_coding	Rplp0	exon	ENSMUSG00000067274	ProperStrand	291	chr11	69483136	69483231	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	6	-4.5467
chr9	108396970	108397147	protein_coding	Usp19	exon	ENSMUSG00000006676	ProperStrand	57	chr11	69483194	69483262	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.5375
chr11	51912349	51912443	protein_coding	Ppp2ca	utr5	ENSMUSG00000020349	ProperStrand	22	chr1	162967534	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-5.3966
chr4	124132209	124132225	lincRNA	1700057H15Rik	intron	ENSMUSG00000084757	ProperStrand	40	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-10.1859
chr1	133769292	133769332	protein_coding	Rab7l1	utr3	ENSMUSG00000026433	NonProperStrand	3	chr4	131908809	131908891	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	3	-inf
chr7	13516165	13516187	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr7	51505224	51505308	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	2	-6.1542
chr9	49354528	49354547	protein_coding	Ncam1	intron	ENSMUSG00000039542	ProperStrand	18	chr3	122506037	122507503	protein_coding	Pde5a	exon	ENSMUSG00000053965	ProperStrand	6	1	-18.9583
chr19	46139119	46139219	protein_coding	Pprc1	exon	ENSMUSG00000055491	ProperStrand	143	chr18	35102297	35102339	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-4.8924
chr9	40611068	40611140	protein_coding	Hspa8	exon	ENSMUSG00000015656	ProperStrand	798	chr16	96211136	96211153	protein_coding	Psmg1	exon	ENSMUSG00000022913	NonProperStrand	1	1	-inf
chr2	90235294	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr12	80867180	80867202	protein_coding	Rad51l1	intron	ENSMUSG00000059060	ProperStrand	26	1	-6.0972
chr5	36834884	36834960	protein_coding	Tbc1d14	utr3	ENSMUSG00000029192	ProperStrand	25	chr2	130101283	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-8.3452
chr15	37929719	37929741	protein_coding	Ubr5	exon	ENSMUSG00000037487	ProperStrand	258	chr10	62341266	62341354	protein_coding	Tet1	exon	ENSMUSG00000047146	ProperStrand	286	1	-7.2724
chr6	59159088	59159132	protein_coding	Tigd2	utr5	ENSMUSG00000049232	ProperStrand	1	chr9	120038652	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-inf
chr19	8800085	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	chr4	131908236	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	16	-0.7588
chr5	36226512	36226528	protein_coding	Ablim2	utr3	ENSMUSG00000029095	ProperStrand	36	chr15	102309068	102309153	protein_coding	Pcbp2	exon	ENSMUSG00000056851	ProperStrand	164	1	-12.3279
chr2	5853565	5863599	protein_coding	Dhtkd1	exon	ENSMUSG00000025815	ProperStrand	46	chr8	64017614	64028377	protein_coding	Palld	exon	ENSMUSG00000058056	NonProperStrand	125	2	-19.0115
chr5	54380836	54380926	LINE	Lx5	L1	chr5Lx554380791	ProperStrand	1	chr5	54380663	54380753	LTR	ORR1D-int	MaLR	chr5ORR1D-int54380325	NonProperStrand	1	1	-inf
chr8	86519627	86519717	protein_coding	Prkaca	utr3	ENSMUSG00000005469	ProperStrand	17	chr11	69481349	69481429	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.6167
chr9	30968864	30968887	protein_coding	Aplp2	exon	ENSMUSG00000031996	ProperStrand	172	chr9	120038613	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-2.5296
chr7	148195681	148195771	protein_coding	Ifitm3	exon	ENSMUSG00000025492	ProperStrand	12	chr9	120037933	120038013	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-7.9197
chr11	98667965	98668039	protein_coding	Msl1	utr3	ENSMUSG00000052915	ProperStrand	8	chr13	49779783	49779802	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	2	-17.4638
chr1	37898095	37898111	protein_coding	Tsga10	exon	ENSMUSG00000060771	ProperStrand	79	chr18	35716763	35716788	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.7309
chr8	129468799	129468880	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	chr1	39605590	39605680	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	3	-0.8744
chrX	7544961	7544977	protein_coding	Gata1	utr5	ENSMUSG00000031162	ProperStrand	30	chr15	79913288	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.9112
chr4	148706812	148706912	protein_coding	Ube4b	intron	ENSMUSG00000028960	ProperStrand	66	chr11	62418054	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-5.3710
chr7	26507878	26531437	protein_coding	Hnrnpul1	exon	ENSMUSG00000040725	ProperStrand	84	chr16	23110852	23110989	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-2.0285
chr1	63222728	63222745	protein_coding	Ndufs1	intron	ENSMUSG00000025968	NonProperStrand	6	chr18	35716775	35716865	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-6.6008
chr2	129998647	129998715	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr10	88877196	88877212	protein_coding	Gas2l3	exon	ENSMUSG00000074802	ProperStrand	16	2	-17.0575
chr4	151730301	151730737	protein_coding	Chd5	exon	ENSMUSG00000005045	NonProperStrand	147	chr7	63188622	63188660	protein_coding	Nipa2	exon	ENSMUSG00000030452	ProperStrand	2	1	-19.8521
chr19	6372076	6372133	protein_coding	Sf1	exon	ENSMUSG00000024949	ProperStrand	251	chr5	121655037	121655127	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-1.3479
chr4	58083061	58083077	protein_coding	Svep1	exon	ENSMUSG00000028369	ProperStrand	54	chr5	135858237	135858338	protein_coding	Pom121	exon	ENSMUSG00000053293	ProperStrand	127	1	-12.0202
chr4	44139834	44139850	protein_coding	Rnf38	utr3	ENSMUSG00000035696	ProperStrand	66	chr4	131865854	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.6223
mmu-miR-5100	2	20	miRNA	mmu-miR-5100	.	mmu-miR-5100	ProperStrand	132	chr5	121655019	121655150	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.3446
chr19	3287012	3288993	protein_coding	Mrpl21	exon	ENSMUSG00000024829	ProperStrand	7	chr11	6428108	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	5	-inf
chr11	79877740	79877845	protein_coding	Crlf3	exon	ENSMUSG00000017561	ProperStrand	47	chr2	158182155	158182194	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-5.4782
chr4	131399490	131399506	protein_coding	Mecr	exon	ENSMUSG00000028910	NonProperStrand	109	chr17	24665423	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	2	-6.4196
chr7	16866069	16866103	protein_coding	Ccdc9	exon	ENSMUSG00000041375	ProperStrand	14	chr16	23110454	23110492	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.1866
chr11	83316351	83317934	protein_coding	Taf15	exon	ENSMUSG00000020680	ProperStrand	60	chr10	23505200	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.2332
chr11	29061782	29061830	protein_coding	Pnpt1	utr3	ENSMUSG00000020464	ProperStrand	17	chr7	29136525	29136553	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-7.8453
chr12	87860528	87860618	protein_coding	Esrrb	utr3	ENSMUSG00000021255	ProperStrand	254	chr4	130491403	130491490	protein_coding	Laptm5	utr3	ENSMUSG00000028581	ProperStrand	34	1	-11.5666
chr10	68578218	68578237	LTR	MT2A	ERVL	chr10MT2A68577899	ProperStrand	21	chr7	86500371	86500388	protein_coding	Abhd2	intron	ENSMUSG00000039202	NonProperStrand	12	1	-19.1087
chr1	93263065	93263081	protein_coding	Fam132b	exon	ENSMUSG00000047443	NonProperStrand	98	chr7	150717298	150717398	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-4.5581
chr1	16093389	16093610	protein_coding	Rpl7	exon	ENSMUSG00000043716	ProperStrand	93	chr7	118219574	118219610	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	3	-8.3936
chr11	3422516	3422533	protein_coding	Smtn	exon	ENSMUSG00000020439	NonProperStrand	2	chr3	34549105	34549125	protein_coding	Sox2	utr5	ENSMUSG00000074637	ProperStrand	299	1	-17.4797
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr11	71859069	71859158	protein_coding	Fam64a	intron	ENSMUSG00000020808	ProperStrand	7	2	-22.3897
chrX	50613079	50613437	protein_coding	Fam122b	exon	ENSMUSG00000036022	ProperStrand	20	chr6	115758048	115758119	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-7.6615
chr1	155396732	155396750	protein_coding	Npl	intron	ENSMUSG00000042684	ProperStrand	1	chr1	145626057	145626137	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-inf
chr8	66489827	66489917	LINE	L1_Mus3	L1	chr8L1_Mus366489041	NonProperStrand	1	chr2	124898739	124898819	protein_coding	Slc24a5	intron	ENSMUSG00000035183	NonProperStrand	3	1	-inf
chr8	11206359	11206375	protein_coding	Col4a1	exon	ENSMUSG00000031502	ProperStrand	64	chr11	69483136	69483194	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.3405
chr7	30042790	30042825	protein_coding	Spint2	intron	ENSMUSG00000074227	ProperStrand	82	chr9	15118334	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-2.9029
chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	chrX	103389812	103390039	protein_coding	Pgk1	exon	ENSMUSG00000062070	ProperStrand	484	1	-3.6778
chr16	22212115	22212205	LTR	MTC-int	MaLR	chr16MTC-int22212057	NonProperStrand	1	chr16	21809322	21809402	LTR	MTE2b	MaLR	chr16MTE2b21809180	ProperStrand	1	1	-inf
chr1	24621464	24621517	protein_coding	Gm10925	utr5	ENSMUSG00000090378	ProperStrand	320	chr11	6428077	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	2	-1.4087
chr11	97034417	97034469	protein_coding	Kpnb1	exon	ENSMUSG00000001440	ProperStrand	197	chr5	147646083	147646639	protein_coding	Rpl21	exon	ENSMUSG00000041453	ProperStrand	112	1	-9.6760
chr10	77452655	77452677	protein_coding	Pfkl	exon	ENSMUSG00000020277	ProperStrand	179	chr3	90197173	90197671	protein_coding	Ints3	exon	ENSMUSG00000027933	ProperStrand	87	1	-10.3736
chr15	60700165	60700245	LTR	MTB_Mm	MaLR	chr15MTB_Mm60700183	NonProperStrand	1	chr15	60700726	60700816	LTR	RMER15	ERVL	chr15RMER1560700587	ProperStrand	1	1	-inf
chr9	69211014	69211030	protein_coding	Rora	intron	ENSMUSG00000032238	ProperStrand	25	chr16	90386834	90386852	protein_coding	Hunk	exon	ENSMUSG00000053414	ProperStrand	104	1	-13.9857
chr1	30870002	30870064	protein_coding	Phf3	intron	ENSMUSG00000048874	ProperStrand	102	chr18	35102301	35102336	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-5.5467
chr7	17018353	17021047	protein_coding	Zc3h4	utr3	ENSMUSG00000059273	ProperStrand	95	chr15	79908929	79908983	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	6	-19.3182
chr11	4073115	4073162	protein_coding	Sf3a1	exon	ENSMUSG00000002129	ProperStrand	78	chr4	116826700	116826764	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-6.2626
chr4	129274179	129276227	protein_coding	Eif3i	exon	ENSMUSG00000028798	ProperStrand	9	chr6	128010926	128010944	protein_coding	Tspan9	intron	ENSMUSG00000030352	ProperStrand	67	1	-16.8976
chr2	38878313	38878708	protein_coding	Golga1	exon	ENSMUSG00000026754	ProperStrand	7	chr11	69483136	69483188	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	5	-22.3865
chr2	121282863	121282879	protein_coding	2310003F16Rik	exon	ENSMUSG00000027245	ProperStrand	40	chr5	135132964	135133037	protein_coding	Limk1	utr3	ENSMUSG00000029674	ProperStrand	10	1	-17.8218
chr13	55200374	55200395	protein_coding	Uimc1	intron	ENSMUSG00000025878	ProperStrand	25	chr19	8963028	8963128	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-6.5242
chr2	34628751	34629375	protein_coding	Hspa5	exon	ENSMUSG00000026864	ProperStrand	181	chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	1	-6.3996
chr1	167828267	167828284	protein_coding	Pou2f1	intron	ENSMUSG00000026565	NonProperStrand	33	chr10	126733478	126733652	protein_coding	Mars	exon	ENSMUSG00000040354	ProperStrand	38	1	-15.4300
chr1	187186999	187187054	protein_coding	Eprs	utr5	ENSMUSG00000026615	ProperStrand	149	chr2	154395370	154395389	protein_coding	E2f1	exon	ENSMUSG00000027490	NonProperStrand	2	1	-20.0730
chr7	94545383	94545409	protein_coding	Nox4	utr3	ENSMUSG00000030562	ProperStrand	4	chr3	68889149	68889202	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-8.7538
chr13	35418315	35418332	DNA	Charlie7	MER1_type	chr13Charlie735418194	NonProperStrand	4	chr2	90235293	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	1	-10.0499
chr17	25996060	25996076	protein_coding	Wdr90	exon	ENSMUSG00000073434	ProperStrand	91	chr3	68889342	68889369	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-2.5212
chr1	108621465	108621541	protein_coding	Kdsr	utr3	ENSMUSG00000009905	ProperStrand	17	chr7	148634805	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-6.4539
chr11	116535915	116535983	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr2	51965463	51965489	protein_coding	Rif1	exon	ENSMUSG00000036202	ProperStrand	201	2	-6.0953
chr14	11617003	11617019	protein_coding	Fhit	intron	ENSMUSG00000060579	ProperStrand	32	chr4	122970391	122970481	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	1	-8.6759
chr2	69856508	69856586	protein_coding	Ubr3	exon	ENSMUSG00000044308	ProperStrand	62	chr18	35714179	35714269	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-3.3828
chr1	141319671	141319687	protein_coding	Zbtb41	utr5	ENSMUSG00000033964	NonProperStrand	145	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-5.9931
chr10	12341172	12353751	protein_coding	Utrn	exon	ENSMUSG00000019820	ProperStrand	69	chr5	108336389	108336490	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-4.6120
chr2	27137476	27137834	protein_coding	Vav2	exon	ENSMUSG00000009621	ProperStrand	14	chr4	131865856	131865946	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.3681
chr11	108783076	108783093	protein_coding	Axin2	utr5	ENSMUSG00000000142	NonProperStrand	81	chr4	131760894	131760948	protein_coding	Ythdf2	exon	ENSMUSG00000040025	ProperStrand	15	1	-15.5339
chr11	77994800	77994821	snoRNA	ENSMUSG00000064540_Snord42a	.	ENSMUSG00000064540	ProperStrand	142	chr9	120037930	120038030	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-3.1000
chr3	94964839	94964882	protein_coding	Sema6c	intron	ENSMUSG00000038777	ProperStrand	30	chr11	77996560	77996605	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-7.4724
chr8	87121090	87121108	protein_coding	Cacna1a	intron	ENSMUSG00000034656	ProperStrand	35	chr3	123210908	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-2.9916
chr2	31544588	31544678	protein_coding-noncoding	Abl1	utr5	ENSMUSG00000026842	ProperStrand	5	chr7	117189961	117190041	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-8.3295
chr2	49111845	49111914	protein_coding	Mbd5	exon	ENSMUSG00000036792	ProperStrand	15	chr4	131908689	131908720	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.5353
chr17	13184995	13185015	protein_coding	Wtap	utr5	ENSMUSG00000060475	ProperStrand	119	chr2	158182198	158182288	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-3.7031
chr14	15572351	15572370	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr18	34880002	34880019	protein_coding	Gfra3	utr5	ENSMUSG00000024366	ProperStrand	41	1	-12.0520
chr5	54389949	54389966	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	chr12	86436075	86436092	protein_coding	Prox2	exon	ENSMUSG00000042320	NonProperStrand	2	1	-18.3100
chr5	108336392	108336495	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	chr8	113366308	113366357	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	4	-5.5376
chr16	57391758	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr18	35714144	35714261	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	4	-0.7950
chr13	104813811	104813827	protein_coding	Nln	utr3	ENSMUSG00000021710	ProperStrand	47	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-9.8606
chr11	79869110	79869185	protein_coding	Crlf3	intron	ENSMUSG00000017561	ProperStrand	47	chr8	129468746	129468796	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-4.8832
chr13	38574199	38574216	protein_coding	Bmp6	intron	ENSMUSG00000039004	ProperStrand	21	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-11.0511
chr6	38558680	38558729	protein_coding	Luc7l2	utr3	ENSMUSG00000029823	ProperStrand	85	chr2	104629887	104629911	protein_coding	Qser1	exon	ENSMUSG00000074994	ProperStrand	22	1	-14.6411
chr11	50720484	50720502	protein_coding	Zfp2	intron	ENSMUSG00000049321	NonProperStrand	3	chr4	131908815	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-6.9471
chr14	79828364	79828380	protein_coding	Kbtbd7	exon	ENSMUSG00000043881	NonProperStrand	1	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-inf
chr11	49486653	49486724	protein_coding	Cnot6	utr3	ENSMUSG00000020362	ProperStrand	18	chr14	31829402	31829436	snoRNA	ENSMUSG00000077797_Snord19	.	ENSMUSG00000077797	ProperStrand	62	2	-22.2011
chrX	7350760	7350860	protein_coding	Tfe3	exon	ENSMUSG00000000134	ProperStrand	10	chr10	23505151	23505215	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.3364
chr1	173341933	173341949	protein_coding	Usf1	utr5	ENSMUSG00000026641	NonProperStrand	144	chr11	77996560	77996609	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-4.3953
chr14	105363667	105363683	LTR	RMER17D2	ERVK	chr14RMER17D2105363569	ProperStrand	8	chr2	91770107	91770123	protein_coding	Mdk	utr3	ENSMUSG00000027239	NonProperStrand	5	1	-18.8889
chrX	112552137	112552153	LTR	ETnERV2-int	ERVK	chrXETnERV2-int112550626	ProperStrand	2	chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-13.8971
chr9	78326545	78329475	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr2	32818834	32818942	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	39	-19.4397
chr18	32997243	32997323	protein_coding	Wdr36	intron	ENSMUSG00000038299	ProperStrand	28	chr7	117189947	117190037	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.7726
chr12	70275666	70275707	protein_coding	Lrr1	exon	ENSMUSG00000034883	ProperStrand	26	chrX	34622906	34622957	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-4.7457
chr14	45949538	45949554	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	chr11	68886971	68887055	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-1.2800
chr4	130324817	130324833	protein_coding	Pum1	exon	ENSMUSG00000028580	NonProperStrand	5	chr8	32260335	32260411	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-9.7163
chr8	73891718	73891918	protein_coding	Use1	exon	ENSMUSG00000002395	ProperStrand	8	chr10	23505200	23505282	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	6	-19.3129
chr17	45707986	45708033	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr1	133252344	133252443	protein_coding	Srgap2	intron	ENSMUSG00000026425	ProperStrand	299	1	-3.6356
chr12	52729414	52729514	protein_coding	Strn3	intron	ENSMUSG00000020954	ProperStrand	10	chr19	8799833	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-8.5498
chr14	122870816	122870832	lincRNA	2610035F20Rik	exon	ENSMUSG00000085555	ProperStrand	29	chr2	16278717	16278739	protein_coding	Plxdc2	utr5	ENSMUSG00000026748	ProperStrand	9	2	-20.4296
chr5	124927861	124927877	protein_coding	Rilpl2	exon	ENSMUSG00000029401	ProperStrand	6	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-13.6880
chr9	104025395	104025411	protein_coding	Ccrl1	intron	ENSMUSG00000079355	ProperStrand	10	chr11	62416577	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	3	-inf
chr8	73419657	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	chr10	23505553	23505628	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	8	-1.9304
chr11	115935746	115937022	protein_coding	Unc13d	exon	ENSMUSG00000057948	ProperStrand	89	chr11	69483197	69483238	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.8056
chr1	40053934	40053951	protein_coding	Map4k4	exon	ENSMUSG00000026074	ProperStrand	348	chr19	8799581	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-3.3920
chr11	6428066	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	NonProperStrand	91	chr16	23111775	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	NonProperStrand	47	1	-12.9710
chr3	17826427	17826444	LINE	L1M4	L1	chr3L1M417826325	ProperStrand	6	chr16	23110454	23110520	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	2	-11.4714
chr6	50541807	50545808	protein_coding	4921507P07Rik	exon	ENSMUSG00000029828	NonProperStrand	2	chr17	24857750	24857851	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-9.4368
chr7	131732978	131732995	LINE	Lx4A	L1	chr7Lx4A131732484	ProperStrand	3	chr4	131908805	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-6.9471
chr15	81680821	81680881	protein_coding	Tob2	utr3	ENSMUSG00000048546	ProperStrand	7	chr8	73419657	73419713	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-7.3719
chr7	50450711	50450840	SINE	B2_Mm2	B2	chr7B2_Mm250450685	ProperStrand	1	chr8	32260335	32260362	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-inf
chr3	94038990	94039070	LINE	L1_Mur3	L1	chr3L1_Mur394038589	ProperStrand	1	chr1	21633267	21633357	protein_coding	Kcnq5	intron	ENSMUSG00000028033	NonProperStrand	8	1	-inf
chr7	109418621	109418637	protein_coding	Stim1	intron	ENSMUSG00000030987	NonProperStrand	11	chr4	131865394	131865441	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-7.3625
chr2	26275203	26275221	protein_coding	Sec16a	exon	ENSMUSG00000026924	ProperStrand	86	chr10	23505148	23505255	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-1.6109
chr2	158182241	158182280	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	chr9	64023233	64023271	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	1	-0.9076
chr2	90235315	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr1	138178661	138178677	protein_coding	Camsap2	exon	ENSMUSG00000041570	NonProperStrand	116	1	-3.2345
chr13	9833563	9833654	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr11	83107806	83107888	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	2	-2.1771
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr6	71832595	71832685	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	11	-19.7088
chr6	119320315	119320360	protein_coding	Adipor2	utr5	ENSMUSG00000030168	ProperStrand	79	chr11	97642952	97643060	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	4	-7.6754
chr3	34548994	34549093	protein_coding	Sox2	utr5	ENSMUSG00000074637	ProperStrand	299	chr19	8798756	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-1.9219
chr11	60251978	60252000	protein_coding	4933439F18Rik	exon	ENSMUSG00000018415	ProperStrand	26	chr16	23111447	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.5788
chr6	84536995	84537012	protein_coding	Cyp26b1	intron	ENSMUSG00000063415	ProperStrand	27	chr7	29136554	29136595	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-3.7994
chr12	103633945	103636403	protein_coding	Lgmn	exon	ENSMUSG00000021190	ProperStrand	18	chr11	116938557	116938637	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-8.5763
chr14	61398407	61398423	protein_coding	C1qtnf9	exon	ENSMUSG00000071347	ProperStrand	187	chr11	55296279	55296314	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-3.9875
chr17	28465767	28465932	protein_coding	Rpl10a	exon	ENSMUSG00000037805	ProperStrand	121	chr17	24857716	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	2	-2.3554
chr18	70981122	70981212	LTR	MTA_Mm	MaLR	chr18MTA_Mm70981074	ProperStrand	1	chr18	70980970	70981050	SINE	RSINE1	B4	chr18RSINE170980907	NonProperStrand	1	1	-inf
chr17	53863910	53863930	pseudogene	4932415M13Rik	.	ENSMUSG00000062036	ProperStrand	3	chr16	23111375	23111425	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-6.9982
chr4	128887018	128887789	protein_coding	Yars	exon	ENSMUSG00000028811	ProperStrand	131	chr11	60368628	60368674	protein_coding	Alkbh5	utr3	ENSMUSG00000042650	ProperStrand	203	6	-19.8501
chr14	98628114	98628194	LINE	L1Md_T	L1	chr14L1Md_T98625862	ProperStrand	1	chr7	10696043	10696133	LINE	L1Md_F3	L1	chr7L1Md_F310695350	ProperStrand	1	1	-inf
chr2	9985901	9985917	protein_coding	Atp5c1	exon	ENSMUSG00000025781	ProperStrand	138	chr11	77326639	77326656	protein_coding	Trp53i13	intron	ENSMUSG00000044328	ProperStrand	14	1	-14.6167
chr11	68836230	68836309	protein_coding	1500010J02Rik	utr5	ENSMUSG00000020898	ProperStrand	38	chr3	108357255	108357298	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-5.4259
chr16	90221118	90223029	protein_coding	Sod1	exon	ENSMUSG00000022982	ProperStrand	75	chr1	39605654	39605697	snoRNA	ENSMUSG00000077704_Snord89	.	ENSMUSG00000077704	ProperStrand	1192	2	-11.1126
chr11	88790571	88791531	protein_coding	Scpep1	exon	ENSMUSG00000000278	ProperStrand	54	chr7	87451404	87452530	protein_coding	Prc1	exon	ENSMUSG00000038943	ProperStrand	35	1	-14.6156
chr17	4082093	4082152	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr4	115670137	115670153	protein_coding	Faah	utr3	ENSMUSG00000034171	ProperStrand	26	1	-11.6563
chr10	79366101	79369513	protein_coding	Med16	exon	ENSMUSG00000013833	ProperStrand	13	chr1	162966003	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-6.5934
chr11	77973209	77973255	protein_coding	Traf4	utr3	ENSMUSG00000017386	ProperStrand	34	chr16	23110829	23110919	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.8923
chr15	77745988	77746037	protein_coding	Txn2	utr3	ENSMUSG00000005354	ProperStrand	82	chr17	35087895	35087958	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-4.5974
chr11	78279368	78279448	protein_coding	Slc46a1	exon	ENSMUSG00000020829	ProperStrand	3	chr2	158182180	158182270	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	3	-inf
chr11	119142044	119142124	protein_coding	Gaa	intron	ENSMUSG00000025579	ProperStrand	149	chr12	81492597	81492687	snoRNA	ENSMUSG00000088158_Scarna3b	.	ENSMUSG00000088158	ProperStrand	147	1	-9.6902
chr11	43233908	43234686	protein_coding	Pttg1	exon	ENSMUSG00000020415	ProperStrand	6	chr1	136329751	136329841	protein_coding	Adipor1	utr3	ENSMUSG00000026457	ProperStrand	48	2	-19.0165
chr9	123065930	123065946	protein_coding	Clec3b	exon	ENSMUSG00000025784	ProperStrand	58	chr18	85127750	85128490	protein_coding	Fbxo15	exon	ENSMUSG00000034391	ProperStrand	23	1	-15.3178
chr8	24522561	24522606	protein_coding	Sfrp1	exon	ENSMUSG00000031548	ProperStrand	22	chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	1	-13.4686
chr15	95905443	95905460	lincRNA	D030018L15Rik	exon	ENSMUSG00000078925	NonProperStrand	2	chr2	143815597	143815649	protein_coding	Rrbp1	exon	ENSMUSG00000027422	ProperStrand	76	1	-inf
chr8	59844564	59844583	LTR	ORR1D1	MaLR	chr8ORR1D159844304	NonProperStrand	1	chr2	26494794	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-inf
chr8	86454923	86454967	protein_coding	Lphn1	exon	ENSMUSG00000013033	ProperStrand	221	chr7	152458043	152458066	protein_coding	Tpcn2	intron	ENSMUSG00000048677	NonProperStrand	4	1	-16.3939
chr9	78023109	78023193	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr15	99570652	99570709	protein_coding	Lass5	intron	ENSMUSG00000023021	ProperStrand	27	3	-16.8096
chr11	33059993	33060421	protein_coding	Npm1	exon	ENSMUSG00000057113	ProperStrand	352	chr10	90581049	90581129	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-1.6744
chr10	79756752	79756818	protein_coding	Rps15	exon	ENSMUSG00000063457	ProperStrand	119	chr17	24665420	24665457	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-3.6438
chr11	50108982	50109012	protein_coding	Canx	utr3	ENSMUSG00000020368	ProperStrand	296	chr11	62416972	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	3	-7.6660
chr2	90235315	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr18	37120378	37120395	protein_coding	Pcdha4	intron	ENSMUSG00000007440	ProperStrand	8	1	-8.5166
chr16	14170443	14170507	protein_coding	Nde1	utr5	ENSMUSG00000022678	ProperStrand	23	chr7	109789611	109789627	protein_coding	Olfr554	exon	ENSMUSG00000073971	NonProperStrand	66	1	-15.0523
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr5	125531369	125531385	protein_coding	Ncor2	exon	ENSMUSG00000029478	ProperStrand	377	1	-5.0901
chr2	26271269	26271641	protein_coding	Sec16a	exon	ENSMUSG00000026924	ProperStrand	86	chr11	69483136	69483226	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-3.3922
chr2	165610262	165610352	protein_coding	Zmynd8	utr3	ENSMUSG00000039671	ProperStrand	81	chr7	116664795	116664875	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-5.6160
chr16	28022095	28022111	LINE	Lx	L1	chr16Lx28020934	ProperStrand	2	chr5	121655016	121655098	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-11.0755
chr7	146409547	146411906	protein_coding	Lrrc27	exon	ENSMUSG00000015980	ProperStrand	2	chr16	23110540	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-9.6327
chr7	152050764	152050823	protein_coding	Fgf4	utr3	ENSMUSG00000050917	ProperStrand	66	chr1	88252838	88252855	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	2	-10.4386
chr6	24684480	24684497	protein_coding	Hyal6	exon	ENSMUSG00000029679	NonProperStrand	114	chr5	142936471	142936612	protein_coding	Foxk1	utr3	ENSMUSG00000056493	ProperStrand	19	1	-14.3556
chr2	28940208	28940264	protein_coding	Ttf1	exon	ENSMUSG00000026803	ProperStrand	15	chr10	110918550	110918640	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-6.1363
chr2	57090809	57090826	protein_coding	Gpd2	utr5	ENSMUSG00000026827	ProperStrand	93	chr8	125731536	125731552	protein_coding	Gm20388	intron	ENSMUSG00000092329	ProperStrand	295	1	-9.2422
chr5	130300419	130300437	protein_coding	Cct6a	intron	ENSMUSG00000029447	ProperStrand	128	chr18	35714196	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	6	-12.8234
chr9	40612831	40612920	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	chr18	33954820	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	6	-6.0913
chr11	118280105	118280164	protein_coding	Cant1	utr5	ENSMUSG00000025575	ProperStrand	22	chr9	108017616	108017633	protein_coding	Bsn	exon	ENSMUSG00000032589	ProperStrand	14	1	-18.5274
chr10	80687365	80687383	protein_coding	Atcay	intron	ENSMUSG00000034958	NonProperStrand	16	chr8	32260372	32260423	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-7.2495
chr7	130445474	130445554	protein_coding	Arhgap17	intron	ENSMUSG00000030766	NonProperStrand	5	chr6	84650305	84650395	protein_coding	Exoc6b	intron	ENSMUSG00000033769	NonProperStrand	5	1	-19.0779
chr19	44910138	44910155	antisense	1700039E22Rik	.	ENSMUSG00000092369	ProperStrand	2	chr7	116663633	116663695	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-9.6916
chr2	90235312	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	121176333	121176349	protein_coding	Ppip5k1	exon	ENSMUSG00000033526	ProperStrand	85	3	-9.3296
chr7	134166128	134166218	protein_coding	Maz	utr3	ENSMUSG00000030678	ProperStrand	42	chr11	69483200	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.0756
chr11	115384608	115384635	protein_coding	Sumo2	utr3	ENSMUSG00000020738	ProperStrand	24	chr16	23111777	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.4982
chr6	48366386	48366437	protein_coding	Krba1	utr3	ENSMUSG00000042810	ProperStrand	7	chr4	131908689	131908722	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-5.0493
chr2	73037499	73037561	protein_coding	Ola1	exon	ENSMUSG00000027108	ProperStrand	17	chr5	130300420	130300510	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.8548
chr12	50315392	50315482	LINE	L1Md_A	L1	chr12L1Md_A50315116	NonProperStrand	1	chr17	35521376	35521466	protein_coding	H2-Q4	utr3	ENSMUSG00000035929	NonProperStrand	10	1	-inf
chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	chr5	108336363	108336409	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	2	-1.3642
chr2	173924609	173924641	protein_coding	Stx16	utr3	ENSMUSG00000027522	ProperStrand	18	chr7	117166799	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-7.2022
chr15	82684574	82684654	protein_coding	Tcf20	exon	ENSMUSG00000041852	ProperStrand	658	chr8	13876135	13876225	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-2.6028
chr11	87913128	87913145	processed_transcript	2210416O15Rik	.	ENSMUSG00000087498	ProperStrand	76	chr7	52713350	52713402	protein_coding	Ftl1	utr3	ENSMUSG00000050708	ProperStrand	807	1	-7.6448
chr5	144143469	144143487	protein_coding	Grid2ip	exon	ENSMUSG00000010825	NonProperStrand	5	chr15	38008126	38008175	protein_coding	Ubr5	exon	ENSMUSG00000037487	ProperStrand	258	1	-15.5685
chr4	151730301	151730737	protein_coding	Chd5	exon	ENSMUSG00000005045	NonProperStrand	147	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-7.1404
chr2	158182248	158182277	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	chr17	26360452	26360542	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	1	-2.0367
chr16	21546912	21546929	protein_coding	Vps8	intron	ENSMUSG00000033653	ProperStrand	27	chr1	162965531	162965554	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.7840
chr15	76408714	76408736	protein_coding	Adck5	intron	ENSMUSG00000022550	ProperStrand	3	chr2	118611946	118611962	protein_coding	Disp2	exon	ENSMUSG00000040035	NonProperStrand	204	1	-17.5445
chr17	46814693	46814914	protein_coding	Klhdc3	exon	ENSMUSG00000063576	ProperStrand	35	chr4	131908811	131908891	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.0337
chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr9	106273100	106273147	protein_coding	Dusp7	exon	ENSMUSG00000053716	ProperStrand	1	1	-inf
chrX	99445995	99446012	protein_coding	Cited1	utr5	ENSMUSG00000051159	ProperStrand	72	chr11	6428055	6428088	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-2.8663
chrX	101154579	101154636	protein_coding	Rlim	utr3	ENSMUSG00000056537	ProperStrand	38	chr18	35716841	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.9566
chr2	29036057	29036130	protein_coding	Setx	utr3	ENSMUSG00000043535	ProperStrand	187	chr19	8800085	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-5.3681
chr11	62416575	62416643	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	chr9	40612834	40612920	snoRNA	ENSMUSG00000064791_Snord14e	.	ENSMUSG00000064791	ProperStrand	394	1	-1.7876
chr11	62416575	62416597	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr10	116798016	116798102	protein_coding	Cpsf6	exon	ENSMUSG00000055531	ProperStrand	86	4	-inf
chr13	112550341	112550431	protein_coding	Map3k1	exon	ENSMUSG00000021754	ProperStrand	113	chr11	69483200	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.4473
chr14	73234969	73235049	LTR	MLT1A0	MaLR	chr14MLT1A073234858	ProperStrand	1	chr11	77659889	77659979	protein_coding	Myo18a	exon	ENSMUSG00000000631	ProperStrand	124	1	-inf
chr6	40158749	40158829	protein_coding	Gm5567	intron	ENSMUSG00000057716	ProperStrand	25	chrX	35231278	35231368	protein_coding	Rhox8	exon	ENSMUSG00000064137	ProperStrand	1	1	-inf
chr1	71660468	71660558	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr5	138253253	138253298	protein_coding	Zcwpw1	exon	ENSMUSG00000037108	ProperStrand	5	1	-12.9907
chr1	158366020	158367850	protein_coding	Soat1	exon	ENSMUSG00000026600	ProperStrand	21	chr9	39882020	39882036	protein_coding	Olfr982	exon	ENSMUSG00000049010	NonProperStrand	35	1	-16.5548
chr1	58463208	58463259	protein_coding	Bzw1	utr3	ENSMUSG00000051223	ProperStrand	14	chr4	131908245	131908335	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.9265
chr7	144099135	144099225	protein_coding	Mgmt	intron	ENSMUSG00000054612	NonProperStrand	4	chr7	116663633	116663723	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	NonProperStrand	51	1	-23.8405
chr7	116663711	116663758	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	chr5	23358035	23358097	snoRNA	ENSMUSG00000093321_Snord93	.	ENSMUSG00000093321	ProperStrand	218	3	-2.3592
chr16	4621527	4621569	protein_coding	Pam16	intron	ENSMUSG00000014301	ProperStrand	5	chr1	84765177	84765247	protein_coding	Trip12	exon	ENSMUSG00000026219	ProperStrand	248	1	-15.6033
chr1	63225254	63225322	snoRNA	ENSMUSG00000064612_SNORD51	.	ENSMUSG00000064612	ProperStrand	562	chr17	24665420	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	2	-2.1615
chr4	86546506	86557592	protein_coding	Acer2	exon	ENSMUSG00000038007	ProperStrand	8	chr11	62416575	62416655	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-9.2486
chr7	29779057	29786805	protein_coding	Map4k1	exon	ENSMUSG00000037337	ProperStrand	31	chr16	23110828	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-4.8130
chr4	135521534	135521550	protein_coding	Gale	exon	ENSMUSG00000028671	ProperStrand	61	chr19	8963031	8963085	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.2473
chr13	64863287	64863304	protein_coding	Cntnap3	exon	ENSMUSG00000033063	ProperStrand	87	chr9	15119632	15119768	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-3.6286
chr19	8798764	8798813	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	chr13	21341062	21341089	tRNA	tRNA996-ThrAGT	.	1497374	ProperStrand	4	2	-16.7904
chr13	55579183	55582911	protein_coding	Dbn1	exon	ENSMUSG00000034675	ProperStrand	43	chr2	26494720	26494800	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.7180
chr6	125051693	125051970	protein_coding	Chd4	exon	ENSMUSG00000063870	ProperStrand	303	chr12	88778629	88778709	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-3.3954
chr2	26200204	26200222	protein_coding	Gpsm1	exon	ENSMUSG00000026930	ProperStrand	93	chr11	79770245	79770279	protein_coding	Utp6	exon	ENSMUSG00000035575	ProperStrand	28	1	-13.9747
chr9	21823257	21823273	protein_coding	Elavl3	exon	ENSMUSG00000003410	NonProperStrand	137	chr16	34549713	34549732	protein_coding	Kalrn	intron	ENSMUSG00000061751	ProperStrand	135	1	-10.0285
chr15	86328125	86328165	protein_coding	Tbc1d22a	utr3	ENSMUSG00000051864	ProperStrand	15	chr3	130431729	130432028	protein_coding	Rpl34	exon	ENSMUSG00000062006	ProperStrand	51	1	-16.5231
chr12	77724091	77724107	protein_coding	Spnb1	exon	ENSMUSG00000021061	ProperStrand	414	chr5	130295414	130295469	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-1.7768
chr2	79132657	79132674	protein_coding-noncoding	Itga4	utr5	ENSMUSG00000027009	NonProperStrand	118	chr16	37029513	37033514	protein_coding	Polq	exon	ENSMUSG00000034206	ProperStrand	7	1	-16.4285
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr11	52666351	52666367	protein_coding	Fstl4	intron	ENSMUSG00000036264	ProperStrand	27	1	-10.2038
chr12	113365237	113365337	protein_coding	Aspg	utr3	ENSMUSG00000037686	ProperStrand	19	chr1	155287325	155287354	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	1	-11.3088
chr7	54443313	54443403	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-1.9609
chr19	22926642	22926662	protein_coding	Trpm3	intron	ENSMUSG00000052387	ProperStrand	54	chr3	58389169	58389185	protein_coding	2810407C02Rik	exon	ENSMUSG00000075700	ProperStrand	8	1	-17.4480
chr10	82456765	82456783	protein_coding	Chst11	intron	ENSMUSG00000034612	ProperStrand	170	chr5	121655027	121655077	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-1.9317
chr17	84847295	84851068	protein_coding	Thada	exon	ENSMUSG00000024251	ProperStrand	47	chr10	80735998	80736017	protein_coding	Tjp3	utr3	ENSMUSG00000034917	ProperStrand	10	6	-inf
chrX	12870977	12871020	protein_coding	Ddx3x	utr3	ENSMUSG00000000787	ProperStrand	67	chr9	120038610	120038643	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.8429
chr11	99885311	99885327	protein_coding	Krt33b	exon	ENSMUSG00000057723	NonProperStrand	352	chr18	75161533	75161556	snoRNA	ENSMUSG00000064844_SNORD58	.	ENSMUSG00000064844	ProperStrand	1280	1	-3.7768
chr11	5180669	5180685	protein_coding	Znrf3	utr3	ENSMUSG00000041961	NonProperStrand	210	chr1	162965531	162965588	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.2385
chrX	10294353	10294369	lincRNA	Gm10489	exon	ENSMUSG00000073288	ProperStrand	1	chr16	23110940	23110957	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr13	96100637	96100727	protein_coding	Zbed3	intron	ENSMUSG00000041995	ProperStrand	33	chr5	74489583	74489663	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-4.9189
chr3	14565746	14565762	protein_coding	Lrrcc1	exon	ENSMUSG00000027550	ProperStrand	39	chr8	113366287	113366354	snoRNA	ENSMUSG00000080518_SNORD111	.	ENSMUSG00000080518	ProperStrand	473	1	-10.0467
chr5	76637903	76637920	protein_coding	Tmem165	utr3	ENSMUSG00000029234	NonProperStrand	3	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-13.1721
chr4	88369960	88369977	SINE	B3	B2	chr4B388369920	NonProperStrand	22	chr5	134722722	134723127	protein_coding	Gtf2i	exon	ENSMUSG00000060261	ProperStrand	41	1	-16.1322
chr4	116006626	116006726	protein_coding	Mast2	intron	ENSMUSG00000003810	ProperStrand	37	chr1	162965986	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-7.5288
chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	chr11	62418013	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	2	-3.4323
chr16	20689345	20692349	protein_coding	Eif4g1	exon	ENSMUSG00000045983	ProperStrand	199	chr5	121655016	121655099	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	6	-11.0030
chr3	36982267	36983858	protein_coding	Adad1	exon	ENSMUSG00000027719	NonProperStrand	2	chr10	77625367	77625415	protein_coding	D10Jhu81e	exon	ENSMUSG00000053329	ProperStrand	2	1	-inf
chr1	65249412	65249443	protein_coding	Pikfyve	exon	ENSMUSG00000025949	ProperStrand	59	chr4	131865919	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.7940
chr15	100416584	100416600	protein_coding	Pou6f1	intron	ENSMUSG00000009739	ProperStrand	44	chr5	151755616	151755632	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-8.3608
chr10	80797342	80797358	protein_coding	Tbxa2r	exon	ENSMUSG00000034881	NonProperStrand	40	chr9	15118322	15118357	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-4.2260
chr11	106681957	106681975	protein_coding	Smurf2	utr3	ENSMUSG00000018363	ProperStrand	79	chr10	110918598	110918688	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-2.9516
chr6	29559293	29559383	protein_coding	Tnpo3	intron	ENSMUSG00000012535	ProperStrand	58	chrX	34622909	34622989	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-3.2325
chr17	23957807	23957901	protein_coding	Srrm2	utr3	ENSMUSG00000039218	ProperStrand	521	chr6	51872316	51872332	protein_coding	Skap2	exon	ENSMUSG00000059182	NonProperStrand	34	3	-19.3499
chr7	134929429	134929529	protein_coding	Setd1a	exon	ENSMUSG00000042308	ProperStrand	58	chr15	5068443	5068480	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	4	-18.7508
chr4	43505878	43505931	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr17	91284450	91284467	protein_coding	Nrxn1	intron	ENSMUSG00000024109	ProperStrand	34	1	-4.1223
chr6	30452440	30452502	protein_coding	Tmem209	intron	ENSMUSG00000029782	ProperStrand	36	chr1	145626114	145626192	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	14	-21.6988
chr14	45949538	45949554	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	chr18	75979993	75980012	protein_coding	Zbtb7c	utr5	ENSMUSG00000044646	ProperStrand	64	2	-15.4715
chr3	96528226	96528306	snoRNA	ENSMUSG00000065669_SNORA5	.	ENSMUSG00000065669	ProperStrand	180	chr10	23505190	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	11	-9.1031
chr15	99433433	99433451	protein_coding	Aqp6	exon	ENSMUSG00000043144	NonProperStrand	45	chr2	26494708	26494840	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	5	-15.3727
mmu-miR-6238	1	20	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr10	23505150	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	6	-1.9557
chr16	36509991	36510067	protein_coding	Casr	exon	ENSMUSG00000051980	ProperStrand	8	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	2	-15.9001
chr11	69481343	69481425	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	chr9	15118533	15118562	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	2	-0.8959
chr11	4584617	4584680	protein_coding	Ascc2	utr3	ENSMUSG00000020412	ProperStrand	27	chr9	83678799	83681879	protein_coding	Elovl4	exon	ENSMUSG00000032262	ProperStrand	159	1	-12.9728
chr7	151765212	151765228	antisense	Gm10574	.	ENSMUSG00000073778	ProperStrand	357	chr11	101120637	101120684	protein_coding	Vps25	utr3	ENSMUSG00000078656	ProperStrand	21	1	-11.8667
chr7	106631411	106631443	snoRNA	ENSMUSG00000065822_Snord15a	.	ENSMUSG00000065822	ProperStrand	128	chr7	116664811	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.3525
chr16	4649890	4649973	protein_coding	Coro7	intron	ENSMUSG00000039637	ProperStrand	25	chr11	68886943	68887033	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-5.8454
chr1	58478058	58478074	protein_coding	Clk1	exon	ENSMUSG00000026034	NonProperStrand	3	chr8	77742558	77742574	protein_coding	Rasd2	exon	ENSMUSG00000034472	NonProperStrand	237	1	-16.9423
chr9	21602970	21602986	protein_coding	Kank2	utr5	ENSMUSG00000032194	ProperStrand	196	chr14	31827485	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-4.6328
chr2	53005174	53009703	protein_coding	Prpf40a	exon	ENSMUSG00000061136	ProperStrand	129	chr19	8963027	8963081	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.1216
chr19	41855694	41855722	protein_coding	Arhgap19	exon	ENSMUSG00000025154	ProperStrand	34	chr4	131908809	131908904	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	4	-7.9837
chr3	89819062	89847724	protein_coding	Ubap2l	exon	ENSMUSG00000042520	ProperStrand	88	chrX	34622906	34623023	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	4	-8.9979
chr10	75719833	75719849	protein_coding	S100b	exon	ENSMUSG00000033208	ProperStrand	20	chr9	15119722	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.6697
chr17	6239843	6239859	protein_coding	Tulp4	utr3	ENSMUSG00000034377	NonProperStrand	265	chr11	106362567	106362639	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-4.5010
chr1	34248406	34351236	protein_coding	Dst	utr5	ENSMUSG00000026131	ProperStrand	461	chr4	131866159	131866283	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	8	-8.7814
chr16	92808636	92808654	protein_coding	Runx1	intron	ENSMUSG00000022952	NonProperStrand	17	chr1	155287314	155287357	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	1	-11.5377
chr11	77995198	77995258	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	chr16	18240811	18240886	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	1	-2.2895
chr9	15069885	15069901	protein_coding	Med17	exon	ENSMUSG00000031935	ProperStrand	135	chr2	26494762	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	2	-3.2006
chr13	24565303	24565345	protein_coding	Cmah	utr3	ENSMUSG00000016756	NonProperStrand	53	chr9	120038478	120038526	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.2629
chr15	68068405	68068421	protein_coding	Zfat	intron	ENSMUSG00000022335	NonProperStrand	25	chr17	66335088	66335125	protein_coding	Ankrd12	exon	ENSMUSG00000034647	ProperStrand	15	1	-17.8450
chr9	40865562	40865578	protein_coding	Ubash3b	intron	ENSMUSG00000032020	ProperStrand	42	chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	1	-11.3379
chr2	15812525	15812615	LINE	L1Md_A	L1	chr2L1Md_A15811976	ProperStrand	1	chr9	19462336	19462426	LINE	L1Md_A	L1	chr9L1Md_A19461964	ProperStrand	81	1	-inf
chr5	22992204	22998171	protein_coding	Mll5	exon	ENSMUSG00000029004	ProperStrand	21	chr16	23110913	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-6.5949
chr4	129190912	129190938	protein_coding	Marcksl1	utr5	ENSMUSG00000047945	ProperStrand	52	chr4	131908809	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.4243
chr2	59537414	59537467	protein_coding	Tanc1	utr5	ENSMUSG00000035168	ProperStrand	80	chr7	26115744	26115760	protein_coding	Megf8	exon	ENSMUSG00000045039	ProperStrand	100	1	-11.7091
chr7	29136525	29136640	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	chr16	18240811	18240901	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	4	-0.9067
chr9	40612077	40612151	snoRNA	ENSMUSG00000075924_Snord14d	.	ENSMUSG00000075924	ProperStrand	131	chr8	73419657	73419745	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-1.8096
chr10	43151179	43151269	protein_coding	Pdss2	intron	ENSMUSG00000038240	NonProperStrand	12	chr7	54443136	54443216	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	NonProperStrand	141	1	-14.8797
chr5	111812088	111812105	protein_coding	Pitpnb	exon	ENSMUSG00000050017	ProperStrand	137	chr11	69483212	69483268	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-1.1797
chr11	68836059	68836092	protein_coding	1500010J02Rik	utr5	ENSMUSG00000020898	ProperStrand	38	chr7	117189920	117190010	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-4.1847
chr11	116460071	116460151	protein_coding	Rhbdf2	utr3	ENSMUSG00000020806	ProperStrand	20	chr9	120039591	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-5.4196
chr8	13952752	13952769	protein_coding	2610019F03Rik	utr3	ENSMUSG00000050052	NonProperStrand	8	chr5	108334195	108334241	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-8.8896
chr6	117874859	117874903	protein_coding	Hnrnpf	exon	ENSMUSG00000042079	ProperStrand	147	chr15	34370599	34370636	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-3.5974
chr19	22926632	22926662	protein_coding	Trpm3	intron	ENSMUSG00000052387	ProperStrand	54	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	4	-16.6178
chr2	131005333	131005351	protein_coding	Cenpb	exon	ENSMUSG00000068267	NonProperStrand	38	chr16	23110963	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.7634
chr6	29366826	29366926	protein_coding	Ccdc136	intron	ENSMUSG00000029769	ProperStrand	19	chr15	79913288	79913318	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-5.8137
chr16	23110454	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	chr5	125884616	125884654	tRNA	tRNA1317-AlaTGC	.	801704	ProperStrand	149	3	-3.3909
chr5	74489261	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr9	83678799	83681878	protein_coding	Elovl4	exon	ENSMUSG00000032262	ProperStrand	159	1	-3.7580
chr5	116035896	116037822	protein_coding	Gcn1l1	exon	ENSMUSG00000041638	ProperStrand	408	chr12	55797772	55797833	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	2	-6.6556
chr9	20600289	20600403	protein_coding	Col5a3	exon	ENSMUSG00000004098	NonProperStrand	14	chr11	50044752	50045256	protein_coding	Mgat4b	exon	ENSMUSG00000036620	ProperStrand	10	1	-20.4644
chr10	115776655	115776672	protein_coding	Ptprb	exon	ENSMUSG00000020154	NonProperStrand	4	chr1	162967536	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-8.9926
chr8	74891843	74891884	protein_coding	Eps15l1	exon	ENSMUSG00000006276	ProperStrand	42	chr11	69483136	69483192	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.0756
chr15	92635158	92635174	LINE	L1MA4	L1	chr15L1MA492634889	NonProperStrand	27	chr11	51464192	51464208	protein_coding	N4bp3	utr5	ENSMUSG00000001053	NonProperStrand	41	1	-15.7327
chr12	32632169	32632186	protein_coding	Hbp1	intron	ENSMUSG00000002996	ProperStrand	26	chr19	18664938	18667077	protein_coding	Ostf1	exon	ENSMUSG00000024725	ProperStrand	8	1	-18.9810
chr10	72437415	72437432	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr5	121655053	121655154	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	6	-3.6040
chr2	164660339	164660383	protein_coding	Ctsa	exon	ENSMUSG00000017760	ProperStrand	36	chr7	148634740	148634837	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-4.9644
chr2	26768049	26768118	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	chr1	162965981	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	4	-1.7021
chr4	43505748	43505848	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	NonProperStrand	174	chr17	39985044	39985087	pseudogene	AY036118	.	ENSMUSG00000045999	ProperStrand	57	2	-17.4221
chr10	70649553	70649574	LTR	MTEb-int	MaLR	chr10MTEb-int70649328	NonProperStrand	3	chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	1	-15.6616
chr14	51427290	51427390	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr11	58115993	58116020	tRNA	tRNA1911-LeuCAA	.	1536705	ProperStrand	165	1	-5.2208
chr7	13610255	13610355	protein_coding	Trim28	exon	ENSMUSG00000005566	ProperStrand	296	chr4	131908235	131908295	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	11	-5.8788
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr7	25673481	25673946	protein_coding	Rps19	exon	ENSMUSG00000040952	ProperStrand	101	1	-7.5660
chr13	60862003	60862021	protein_coding	Dapk1	exon	ENSMUSG00000021559	NonProperStrand	40	chr1	89673716	89673785	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	3	-9.8168
chr5	25272453	25272472	protein_coding	Actr3b	intron	ENSMUSG00000056367	NonProperStrand	1	chr11	69482353	69482403	snoRNA	ENSMUSG00000089542_snoU6-77	.	ENSMUSG00000089542	ProperStrand	138	1	-inf
chr11	96162051	96162067	protein_coding	Hoxb6	exon	ENSMUSG00000000690	ProperStrand	7	chr5	108336363	108336487	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-9.2393
chr11	23193800	23193837	protein_coding	Xpo1	exon	ENSMUSG00000020290	ProperStrand	123	chr15	79913288	79913345	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	2	-4.1211
chr16	98284274	98284314	LINE	L1_Mus1	L1	chr16L1_Mus198283327	ProperStrand	23	chr18	35716835	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-9.6244
chr13	9833580	9833615	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr4	132530098	132530116	protein_coding	Fgr	utr5	ENSMUSG00000028874	ProperStrand	383	1	-1.6628
chr9	59513092	59519880	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	4	-3.5670
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr5	114634121	114634153	protein_coding	Acacb	exon	ENSMUSG00000042010	ProperStrand	7	1	-13.2161
chr11	59778161	59778177	protein_coding	Rasd1	exon	ENSMUSG00000049892	NonProperStrand	49	chr12	88620855	88620871	protein_coding	Ism2	exon	ENSMUSG00000050671	ProperStrand	12	1	-17.1341
chr4	131865856	131865936	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr16	87419191	87419281	snoRNA	ENSMUSG00000065647_SNORA2	.	ENSMUSG00000065647	ProperStrand	123	1	-0.7947
chr5	74489218	74489298	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr4	41069204	41069294	protein_coding	Nol6	exon	ENSMUSG00000028430	ProperStrand	98	1	-4.6709
chr5	74489211	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr19	8799829	8799898	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	11	-3.9419
chr2	5789897	5789947	protein_coding	Nudt5	utr3	ENSMUSG00000025817	ProperStrand	5	chr10	85763254	85763270	protein_coding	Syn3	intron	ENSMUSG00000059602	ProperStrand	17	1	-19.6626
chr19	5052580	5052597	protein_coding	Rin1	exon	ENSMUSG00000024883	NonProperStrand	387	chr7	133940254	133940852	protein_coding	Aldoa	exon	ENSMUSG00000030695	ProperStrand	721	1	-4.6781
chr16	23110454	23110578	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	chr2	130103751	130103812	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	5	-0.7648
chrX	8844003	8844021	protein_coding	Lancl3	utr3	ENSMUSG00000047344	ProperStrand	6	chr3	108357255	108357351	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	4	-19.1022
chr17	75045959	75045976	protein_coding	Birc6	exon	ENSMUSG00000024073	NonProperStrand	36	chr13	22127740	22127798	protein_coding	Hist1h2bk	utr5	ENSMUSG00000062727	ProperStrand	16	1	-17.0670
chr11	79845838	79845867	protein_coding	Suz12	utr3	ENSMUSG00000017548	ProperStrand	53	chr4	41150098	41150147	snoRNA	ENSMUSG00000089265_SNORD121A	.	ENSMUSG00000089265	ProperStrand	370	1	-9.9185
chr18	12233710	12233727	protein_coding	6030446N20Rik	intron	ENSMUSG00000049411	NonProperStrand	3	chr11	69481335	69481475	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-9.3812
chr11	3191585	3191632	protein_coding	Patz1	exon	ENSMUSG00000020453	ProperStrand	14	chr7	116663631	116663721	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-5.2435
chr3	129857307	129857325	LTR	MLT2B2	ERVL	chr3MLT2B2129857156	ProperStrand	2	chr7	29136525	29136615	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-inf
chr4	131399490	131399506	protein_coding	Mecr	exon	ENSMUSG00000028910	NonProperStrand	109	chr4	131908685	131908865	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-4.2449
chr3	107499264	107499376	protein_coding	Ahcyl1	utr5	ENSMUSG00000027893	ProperStrand	81	chr15	71624767	71624798	snoRNA	ENSMUSG00000088895_SNORA81	.	ENSMUSG00000088895	ProperStrand	348	2	-14.5457
chrX	100054604	100054620	protein_coding	1700031F05Rik	utr3	ENSMUSG00000032894	NonProperStrand	1	chr4	131908242	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-inf
chr4	116665195	116665261	protein_coding	Urod	exon	ENSMUSG00000028684	ProperStrand	14	chr14	76247711	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	10	-19.4957
chr8	73032385	73033253	protein_coding	2810422J05Rik	exon	ENSMUSG00000055553	ProperStrand	171	chr2	26768404	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	2	-6.1056
chr2	162757394	162757418	protein_coding	Srsf6	utr5	ENSMUSG00000016921	ProperStrand	30	chr11	69481343	69481433	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-4.4996
chr19	43269721	43269737	protein_coding	Hpse2	intron	ENSMUSG00000074852	NonProperStrand	48	chr1	162965530	162965588	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.6869
chr15	88992266	88992496	protein_coding	Plxnb2	exon	ENSMUSG00000036606	ProperStrand	119	chr16	23111738	23111818	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-0.9346
chr2	17949197	17949213	protein_coding	A930004D18Rik	utr5	ENSMUSG00000054057	ProperStrand	17	chr17	35089183	35089216	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-8.0062
chr5	75502219	75502299	SINE	B1_Mur2	Alu	chr5B1_Mur275502154	ProperStrand	1	chr5	75502321	75502411	SINE	ID_B1	B4	chr5ID_B175502324	ProperStrand	1	1	-inf
chr17	4082108	4082746	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr17	35299507	35299633	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	2	-3.2886
chr17	24665430	24665498	protein_coding	Rab26	intron	ENSMUSG00000079657	ProperStrand	11	chr1	63225622	63225712	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	NonProperStrand	3	1	-22.5261
chr12	114359283	114361329	protein_coding	Mta1	exon	ENSMUSG00000021144	ProperStrand	74	chr6	5103505	5103530	protein_coding	Ppp1r9a	intron	ENSMUSG00000032827	ProperStrand	50	1	-13.2594
chr11	60533648	60533872	protein_coding	Flii	exon	ENSMUSG00000002812	ProperStrand	42	chr7	29136545	29136635	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.9861
chr5	27919298	27919315	protein_coding	Dpp6	intron	ENSMUSG00000061576	NonProperStrand	32	chr11	6428108	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.3666
chr10	74902677	74902694	protein_coding	1110038D17Rik	intron	ENSMUSG00000033416	ProperStrand	3	chr16	57391542	57391635	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	1	-16.7106
chr5	121144706	121144723	protein_coding	Dtx1	exon	ENSMUSG00000029603	NonProperStrand	33	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.7641
chr7	51764967	51765159	protein_coding	Mybpc2	exon	ENSMUSG00000038670	ProperStrand	13	chr10	110918655	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-6.4274
chr17	36094322	36094422	protein_coding	Abcf1	utr3	ENSMUSG00000038762	ProperStrand	206	chr15	98356836	98356899	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	1	-5.3229
chr10	75952729	75953479	protein_coding	Mcm3ap	exon	ENSMUSG00000001150	ProperStrand	95	chr4	43013044	43013124	protein_coding	Vcp	utr5	ENSMUSG00000028452	ProperStrand	108	2	-17.4877
chr18	36754578	36754595	protein_coding	Ankhd1	utr5	ENSMUSG00000024483	NonProperStrand	11	chr15	58577335	58577351	protein_coding	Fer1l6	intron	ENSMUSG00000037106	ProperStrand	54	1	-17.0052
chr18	39014890	39014907	protein_coding	Fgf1	intron	ENSMUSG00000036585	ProperStrand	14	chr16	23111776	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-4.5328
chr9	103950068	103950086	protein_coding	Uba5	intron	ENSMUSG00000032557	ProperStrand	111	chr19	8799582	8799643	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-5.5562
chr10	122391590	122391608	LINE	L1M4	L1	chr10L1M4122391237	ProperStrand	3	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-14.1023
chr9	66266334	66266362	protein_coding	Herc1	exon	ENSMUSG00000038664	ProperStrand	81	chr4	69925631	69925647	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	1	-7.5106
chr6	65820448	65833530	protein_coding	Prdm5	exon	ENSMUSG00000029913	ProperStrand	50	chr18	73693168	73693188	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-5.8818
chr8	93456678	93456768	protein_coding	Chd9	exon	ENSMUSG00000056608	ProperStrand	35	chr11	69483181	69483261	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.4080
chr9	120039533	120039682	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	chr15	34370544	34370677	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	42	-0.7161
chr14	31985000	31985019	protein_coding	Nisch	exon	ENSMUSG00000021910	ProperStrand	125	chr4	21806892	21819958	protein_coding	Coq3	exon	ENSMUSG00000028247	ProperStrand	10	1	-15.4867
chr17	13112531	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	chr2	130103751	130103811	snoRNA	ENSMUSG00000065272_Snord57	.	ENSMUSG00000065272	ProperStrand	675	3	-2.3665
chr11	115452993	115453774	protein_coding	Gga3	exon	ENSMUSG00000020740	ProperStrand	44	chr18	73693168	73693185	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	3	-14.1204
chr18	67829332	67829348	protein_coding	Ptpn2	intron	ENSMUSG00000024539	ProperStrand	35	chr4	131908808	131908870	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-2.0337
chr7	71511483	71511500	protein_coding	Fan1	exon	ENSMUSG00000033458	NonProperStrand	4	chr9	64659390	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-14.6015
chr4	118805097	118805179	protein_coding	Slc2a1	exon	ENSMUSG00000028645	ProperStrand	361	chr5	135097487	135097819	protein_coding	Eif4h	exon	ENSMUSG00000040731	ProperStrand	46	1	-10.2532
chr2	26493364	26495336	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr2	26494700	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	97	-19.9160
chr10	42742071	42742090	protein_coding	Sobp	exon	ENSMUSG00000038248	ProperStrand	15	chr2	26494742	26494826	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.7664
chr7	28663588	28663604	protein_coding	Zfp607	exon	ENSMUSG00000020420	NonProperStrand	2	chr19	8799021	8799078	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-13.2620
chr16	11144194	11144294	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chr7	117190015	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	NonProperStrand	17	2	-20.1997
chr11	96773544	96773592	protein_coding	Cdk5rap3	exon	ENSMUSG00000018669	ProperStrand	16	chr18	32405206	32405222	protein_coding	Ercc3	exon	ENSMUSG00000024382	ProperStrand	280	1	-12.9136
chr17	36097663	36097764	protein_coding	Abcf1	exon	ENSMUSG00000038762	ProperStrand	206	chr19	8963117	8963165	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-1.2505
chr19	28937443	28937493	pseudogene	Gm5822	.	ENSMUSG00000089993	ProperStrand	1	chr2	26493366	26493465	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-inf
chr11	51464192	51464208	protein_coding	N4bp3	utr5	ENSMUSG00000001053	NonProperStrand	41	chr4	131908234	131908332	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-7.7237
chr13	9833563	9833652	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr5	121873576	121873656	protein_coding	Naa25	exon	ENSMUSG00000042719	ProperStrand	95	1	-4.0770
chr6	90512637	90512682	protein_coding	Aldh1l1	exon	ENSMUSG00000030088	ProperStrand	1	chr8	77742558	77742574	protein_coding	Rasd2	exon	ENSMUSG00000034472	NonProperStrand	237	1	-inf
chr8	80959126	80959142	protein_coding	Pou4f2	exon	ENSMUSG00000031688	NonProperStrand	4	chr8	98269959	98270097	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-11.1714
chr4	149012378	149012438	protein_coding	Clstn1	exon	ENSMUSG00000039953	ProperStrand	173	chr8	13876180	13876225	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-5.0655
chr17	35276179	35276225	protein_coding	Bag6	exon	ENSMUSG00000024392	ProperStrand	181	chr9	121823892	121823908	protein_coding	Cyp8b1	exon	ENSMUSG00000050445	NonProperStrand	101	1	-10.0524
chr7	106628091	106628181	snoRNA	ENSMUSG00000064966_Snord15b	.	ENSMUSG00000064966	ProperStrand	74	chr9	64024466	64024553	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	1	-7.9462
chr3	137849424	137849440	protein_coding	4930579F01Rik	utr5	ENSMUSG00000012042	NonProperStrand	156	chr3	123210913	123210985	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-1.5290
chr17	27649644	27649660	protein_coding	Grm4	intron	ENSMUSG00000063239	ProperStrand	147	chr2	22444181	22444311	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-6.0027
chr14	31951977	31952067	protein_coding	Nt5dc2	exon	ENSMUSG00000071547	ProperStrand	22	chr4	116826697	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	7	-20.6695
chr3	85942701	85942773	protein_coding	Rps3a	intron	ENSMUSG00000028081	ProperStrand	177	chr1	88247814	88247862	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-3.0698
chr19	43579408	43579425	protein_coding	Got1	intron	ENSMUSG00000025190	NonProperStrand	147	chr1	191648974	191656666	protein_coding	Ptpn14	exon	ENSMUSG00000026604	ProperStrand	74	2	-17.3798
chr16	44734692	44734782	protein_coding	BC027231	exon	ENSMUSG00000036208	ProperStrand	4	chr4	131865858	131865938	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.0048
chr12	8751439	8751524	protein_coding	Pum2	exon	ENSMUSG00000020594	ProperStrand	39	chr8	63565211	63565270	protein_coding	Nek1	exon	ENSMUSG00000031644	ProperStrand	23	3	-18.6594
chr2	144116363	144116383	LTR	MLT2B2	ERVL	chr2MLT2B2144116217	NonProperStrand	17	chr10	128257530	128257546	protein_coding	Ormdl2	utr5	ENSMUSG00000025353	ProperStrand	51	1	-16.2531
chr15	37913842	37913898	protein_coding	Ubr5	exon	ENSMUSG00000037487	ProperStrand	258	chr8	129468746	129468813	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	6	-11.5954
chr17	25521324	25521365	protein_coding	Cacna1h	exon	ENSMUSG00000024112	ProperStrand	30	chr16	23110828	23110902	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0481
chr19	46729109	46729164	protein_coding	D19Wsu162e	exon	ENSMUSG00000047731	ProperStrand	16	chr5	121655017	121655107	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-6.3246
chr6	125060114	125060296	protein_coding	Chd4	exon	ENSMUSG00000063870	ProperStrand	303	chr7	114353129	114353152	protein_coding	Rbmxl2	exon	ENSMUSG00000073894	ProperStrand	23	1	-12.0084
chr14	66796874	66796939	protein_coding	Ptk2b	exon	ENSMUSG00000059456	ProperStrand	7	chr2	26768367	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-9.9835
chr11	108783076	108783093	protein_coding	Axin2	utr5	ENSMUSG00000000142	NonProperStrand	81	chr14	33005214	33005238	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-3.4363
chr2	63936035	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chr10	90581034	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	3	-1.8738
chr16	37384897	37384913	protein_coding	Stxbp5l	utr5	ENSMUSG00000022829	ProperStrand	332	chr4	132851189	132851257	protein_coding	Wdtc1	exon	ENSMUSG00000037622	ProperStrand	81	1	-9.2832
chr4	77957002	77957020	LINE	Lx6	L1	chr4Lx677956774	ProperStrand	16	chr3	108357443	108357564	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-7.1561
chr17	47881185	47881275	protein_coding	Tfeb	intron	ENSMUSG00000023990	ProperStrand	78	chr4	131908357	131908410	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.0614
chr15	101925447	101925740	protein_coding	Eif4b	exon	ENSMUSG00000058655	ProperStrand	484	chr17	35299561	35299641	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-1.1969
chr13	9833563	9833652	LINE	L1Md_T	L1	chr13L1Md_T9831266	NonProperStrand	15	chr11	79254375	79254392	protein_coding	Nf1	exon	ENSMUSG00000020716	NonProperStrand	5	1	-20.3414
chr6	52163242	52163258	protein_coding	Hoxa3	exon	ENSMUSG00000079560	ProperStrand	11	chr4	56910504	56910560	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-9.5409
chr11	109259302	109259327	protein_coding	Gna13	utr3	ENSMUSG00000020611	ProperStrand	23	chr11	97642957	97643059	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	5	-17.4870
chr5	66651465	66651481	protein_coding	Nsun7	utr5	ENSMUSG00000029206	NonProperStrand	73	chr8	86104532	86104570	protein_coding	Tecr	intron	ENSMUSG00000031708	ProperStrand	100	1	-11.8930
chr8	74992107	74992143	protein_coding	Cherp	exon	ENSMUSG00000052488	ProperStrand	43	chr2	166890543	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-8.2243
chr1	185545465	185545482	LTR	ORR1D2	MaLR	chr1ORR1D2185545408	ProperStrand	12	chr4	118805282	118805767	protein_coding	Slc2a1	exon	ENSMUSG00000028645	ProperStrand	361	1	-13.0018
chr17	35215505	35215591	protein_coding	Ly6g6e	utr3	ENSMUSG00000013766	ProperStrand	6	chr15	89390099	89390122	protein_coding	Shank3	utr3	ENSMUSG00000022623	ProperStrand	19	2	-19.4080
chr9	102627053	102627143	protein_coding	Amotl2	exon	ENSMUSG00000032531	ProperStrand	54	chr16	56035885	56035965	snoRNA	ENSMUSG00000064994_SNORA70	.	ENSMUSG00000064994	ProperStrand	532	1	-9.1568
chr6	85411105	85418355	protein_coding	Cct7	exon	ENSMUSG00000030007	ProperStrand	173	chr9	120038472	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	4	-5.6248
chr2	181242890	181242915	protein_coding	Tpd52l2	exon	ENSMUSG00000000827	ProperStrand	20	chr11	55296236	55296332	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-8.3823
chr8	32394725	32394758	LINE	L1_Mur3	L1	chr8L1_Mur332394693	ProperStrand	1	chr13	112547307	112548277	protein_coding	Map3k1	utr5	ENSMUSG00000021754	ProperStrand	113	1	-inf
chr15	80365065	80365083	protein_coding	Enthd1	exon	ENSMUSG00000050439	NonProperStrand	5	chr11	101304829	101304846	protein_coding	Rpl27	exon	ENSMUSG00000063316	NonProperStrand	7	1	-20.9134
chr17	35379662	35379699	protein_coding	Ddx39b	utr5	ENSMUSG00000019432	ProperStrand	119	chr9	40612077	40612132	snoRNA	ENSMUSG00000075924_Snord14d	.	ENSMUSG00000075924	ProperStrand	131	2	-16.3088
chr11	58809803	58810353	protein_coding	Obscn	exon	ENSMUSG00000061462	ProperStrand	81	chr19	8798484	8798509	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-4.6321
chr9	57606519	57608636	protein_coding	Clk3	exon	ENSMUSG00000032316	NonProperStrand	15	chr16	23110894	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.0842
chr4	108278918	108278934	protein_coding	Orc1	exon	ENSMUSG00000028587	ProperStrand	161	chr3	68889026	68889048	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-1.6025
chr12	110918201	110918221	snoRNA	ENSMUSG00000065749_AF357428	.	ENSMUSG00000065749	ProperStrand	218	chr15	79908939	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-3.0443
chr10	89252418	89252440	protein_coding	Uhrf1bp1l	intron	ENSMUSG00000019951	ProperStrand	28	chr16	43886794	43886894	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	1	-9.6101
chr16	91636303	91636330	protein_coding	Gart	exon	ENSMUSG00000022962	ProperStrand	200	chr1	182529142	182529754	protein_coding	Parp1	exon	ENSMUSG00000026496	ProperStrand	227	1	-8.2362
chr18	77389848	77389898	protein_coding	Pias2	intron	ENSMUSG00000025423	ProperStrand	52	chr9	120038561	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.2976
chr9	63868722	63868738	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	chr10	39978308	39978407	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-1.3050
chr11	62416575	62416598	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr1	46892874	46892918	protein_coding	Slc39a10	exon	ENSMUSG00000025986	ProperStrand	95	1	-8.0526
chr13	101403239	101403262	protein_coding	Rad17	exon	ENSMUSG00000021635	ProperStrand	8	chr14	20570786	20571509	protein_coding	Nid2	exon	ENSMUSG00000021806	ProperStrand	372	1	-13.7925
chr15	36535577	36535677	protein_coding	Pabpc1	exon	ENSMUSG00000022283	ProperStrand	908	chr9	63868722	63868739	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	1	-3.3192
chr2	165115911	165115928	protein_coding	Elmo2	exon	ENSMUSG00000017670	NonProperStrand	8	chr7	134630799	134630815	protein_coding	Fbrs	exon	ENSMUSG00000042423	ProperStrand	7	1	-19.5782
chr15	85411907	85411925	protein_coding	Wnt7b	utr5	ENSMUSG00000022382	ProperStrand	21	chr19	8799847	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-7.0246
chr13	22098354	22098371	protein_coding	Prss16	intron	ENSMUSG00000006179	ProperStrand	78	chr16	91729698	91729722	protein_coding	Itsn1	utr5	ENSMUSG00000022957	ProperStrand	172	2	-16.7547
chr11	115158809	115158828	protein_coding	Fads6	utr5	ENSMUSG00000044788	NonProperStrand	2	chr13	49779667	49779715	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-14.4661
chr7	24779190	24779213	SINE	ID_B1	B4	chr7ID_B124779183	NonProperStrand	54	chr4	115243472	115243576	protein_coding	Cyp4a31	exon	ENSMUSG00000028712	ProperStrand	61	1	-13.4926
chr11	106362346	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	chr5	135529878	135529978	snoRNA	ENSMUSG00000088008_SCARNA20	.	ENSMUSG00000088008	ProperStrand	139	1	-4.2210
chr7	86858928	86858945	protein_coding	Kif7	exon	ENSMUSG00000050382	NonProperStrand	1	chr9	64143745	64143784	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-inf
chr1	71341491	71341508	protein_coding	Abca12	exon	ENSMUSG00000050296	NonProperStrand	143	chr18	35716763	35716875	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-0.9125
chr10	7383389	7383405	protein_coding	Pcmt1	utr5	ENSMUSG00000019795	ProperStrand	55	chr19	8963118	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-2.4215
chr13	68708931	68709948	protein_coding	Mtrr	exon	ENSMUSG00000034617	ProperStrand	14	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-11.9387
chr8	96704144	96704204	protein_coding	Mt1	utr3	ENSMUSG00000031765	ProperStrand	92	chr3	88715214	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-6.3871
chr4	43505845	43505925	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr16	33298800	33298890	protein_coding	Snx4	utr3	ENSMUSG00000022808	ProperStrand	25	1	-4.7144
chr8	72287172	72287188	protein_coding	Zfp866	utr3	ENSMUSG00000043090	NonProperStrand	134	chrX	34622906	34622968	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-1.8098
chr2	51483107	51483123	protein_coding	Tas2r134	exon	ENSMUSG00000056115	NonProperStrand	1	chr16	23110910	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr10	99923613	99923629	protein_coding	Tmtc3	exon	ENSMUSG00000036676	NonProperStrand	9	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-12.8637
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr7	150717334	150717424	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	6	-15.4439
chr7	121190933	121191034	protein_coding	Rras2	utr3	ENSMUSG00000055723	ProperStrand	26	chr11	62416579	62416621	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-6.8193
chr11	50108912	50108940	protein_coding	Canx	utr3	ENSMUSG00000020368	ProperStrand	296	chr10	127677263	127677330	protein_coding	Timeless	exon	ENSMUSG00000039994	ProperStrand	53	3	-20.6483
chr2	70927899	70927915	protein_coding	Dcaf17	exon	ENSMUSG00000041966	NonProperStrand	89	chr2	145076804	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-6.9390
chr14	15203741	15203821	LINE	L1VL4	L1	chr14L1VL415203223	ProperStrand	1	chr14	15204038	15204128	LINE	L1_Mus1	L1	chr14L1_Mus115203868	ProperStrand	1	1	-inf
chr12	85005005	85005053	protein_coding	Rbm25	exon	ENSMUSG00000010608	ProperStrand	42	chr4	56910538	56910628	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-6.8138
chr11	68067261	68067277	protein_coding	Ntn1	intron	ENSMUSG00000020902	NonProperStrand	194	chr2	91436228	91436262	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-5.1889
chr10	80640932	80644836	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr11	6428035	6428172	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	19	-3.8890
chr15	78962295	78962495	protein_coding	Micall1	exon	ENSMUSG00000033039	ProperStrand	48	chr11	69481335	69481431	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.6095
chr2	154472258	154472274	protein_coding	Zfp341	utr3	ENSMUSG00000059842	NonProperStrand	7	chr8	46120913	46121489	protein_coding	Fat1	exon	ENSMUSG00000070047	ProperStrand	306	1	-14.4709
chr3	86617632	86619073	protein_coding	Dclk2	exon	ENSMUSG00000028078	ProperStrand	50	chr10	23505181	23505271	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.4914
chr3	82816757	82816774	protein_coding	Fgg	exon	ENSMUSG00000033860	NonProperStrand	321	chr7	86978494	86978594	protein_coding	Anpep	exon	ENSMUSG00000039062	ProperStrand	9	1	-13.8366
chr11	60590425	60590441	protein_coding	Top3a	exon	ENSMUSG00000002814	ProperStrand	28	chr2	28368857	28368875	protein_coding	Ralgds	utr5	ENSMUSG00000026821	NonProperStrand	60	1	-14.8589
chr6	47731673	47731708	misc_RNA	Y_RNA	.	ENSMUSG00000064945	ProperStrand	93	chr12	112779242	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-3.9429
chr16	15915463	15936708	protein_coding	2310008H04Rik	exon	ENSMUSG00000041974	ProperStrand	30	chr3	123210854	123210918	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.2714
chr3	145171662	145171678	protein_coding	Col24a1	exon	ENSMUSG00000028197	ProperStrand	33	chrX	7740037	7740053	protein_coding	Tbc1d25	intron	ENSMUSG00000039201	NonProperStrand	2	1	-inf
chr5	143754357	143754447	protein_coding	Rnf216	exon	ENSMUSG00000045078	ProperStrand	38	chr11	69481343	69481423	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-4.0476
chr1	55138940	55139945	protein_coding	Hspd1	exon	ENSMUSG00000025980	ProperStrand	140	chr10	127521199	127521234	snoRNA	ENSMUSG00000064778_SNORD59	.	ENSMUSG00000064778	ProperStrand	574	3	-16.0201
chr1	178970224	178970286	protein_coding	Akt3	intron	ENSMUSG00000019699	ProperStrand	12	chr16	23110843	23110873	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.4686
chr6	28745887	28824938	protein_coding	Snd1	exon	ENSMUSG00000001424	ProperStrand	210	chr6	94776857	94776875	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	1	-6.6085
chr11	100572211	100572648	protein_coding	Kat2a	exon	ENSMUSG00000020918	ProperStrand	68	chr17	30162510	30162531	protein_coding	Zfand3	intron	ENSMUSG00000044477	ProperStrand	20	3	-19.5291
chr2	138111188	138111278	protein_coding	Btbd3	utr3	ENSMUSG00000062098	ProperStrand	16	chr3	123210898	123210978	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-4.4647
chr11	116507560	116507576	protein_coding	Cygb	utr3	ENSMUSG00000020810	ProperStrand	3	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.6896
chr12	87801813	87801878	protein_coding	Esrrb	intron	ENSMUSG00000021255	NonProperStrand	14	chr19	8798740	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	5	-inf
chr1	88248587	88248605	snoRNA	ENSMUSG00000064696_SNORD20	.	ENSMUSG00000064696	NonProperStrand	4	chrX	71517908	71517951	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-12.1981
chr12	110785284	110785384	lincRNA	Meg3	intron	ENSMUSG00000021268	ProperStrand	61	chr4	131908236	131908272	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-2.6467
chr4	130037564	130037583	protein_coding	Snrnp40	exon	ENSMUSG00000074088	ProperStrand	12	chr18	33954824	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	3	-15.4448
chr13	9833552	9833651	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr1	137049132	137049192	protein_coding	Arl8a	intron	ENSMUSG00000026426	ProperStrand	12	2	-13.1498
chr5	118477951	118511671	protein_coding	Tesc	exon	ENSMUSG00000029359	ProperStrand	114	chr8	73419658	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	4	-7.6899
chr16	84801875	84807160	protein_coding	Jam2	exon	ENSMUSG00000053062	ProperStrand	39	chr10	23505152	23505216	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-7.3625
chr12	80276976	80276993	protein_coding	Rdh11	utr3	ENSMUSG00000066441	NonProperStrand	23	chr12	17553062	17553087	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-6.9871
chr3	154753105	154754393	protein_coding	Fpgt	exon	ENSMUSG00000053870	ProperStrand	2	chr14	31827478	31827545	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-14.4005
chr1	89091564	89092064	protein_coding	Chrnd	exon	ENSMUSG00000026251	ProperStrand	32	chr5	121655100	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.9473
chr14	51547179	51547279	protein_coding	Tmem55b	utr3	ENSMUSG00000035953	ProperStrand	14	chr16	23110965	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.2008
chr12	101546398	101546415	protein_coding	Ttc7b	intron	ENSMUSG00000033530	NonProperStrand	15	chr19	9004433	9005295	protein_coding	Eml3	exon	ENSMUSG00000071647	ProperStrand	19	1	-18.9281
chr16	38089975	38089992	protein_coding	Gsk3b	utr5	ENSMUSG00000022812	ProperStrand	80	chr15	97796686	97796740	protein_coding	Tmem106c	exon	ENSMUSG00000052369	ProperStrand	3	1	-inf
chr2	112489597	112492627	protein_coding	Ryr3	exon	ENSMUSG00000057378	ProperStrand	15	chr16	38158175	38158222	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	1	-11.4656
chr14	15572355	15572371	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr9	40612080	40612164	snoRNA	ENSMUSG00000075924_Snord14d	.	ENSMUSG00000075924	ProperStrand	131	1	-9.7166
chr8	34727562	34727585	protein_coding	Ppp2cb	exon	ENSMUSG00000009630	ProperStrand	14	chr15	99548653	99548669	protein_coding	Gpd1	exon	ENSMUSG00000023019	ProperStrand	40	1	-17.1956
chr16	16312452	16312469	protein_coding	Dnm1l	utr3	ENSMUSG00000022789	ProperStrand	29	chr16	23111383	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.3903
chr11	84108486	84108504	protein_coding	Acaca	exon	ENSMUSG00000020532	ProperStrand	100	chr3	35725890	35725907	protein_coding	Atp11b	exon	ENSMUSG00000037400	NonProperStrand	18	1	-14.7294
chr8	8681667	8681723	protein_coding	Arglu1	intron	ENSMUSG00000040459	ProperStrand	20	chr11	6428074	6428164	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.2839
chr2	90235293	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	62416951	62417029	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	7	-1.2563
chr19	8798743	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	chr9	15118519	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	1	-1.3573
chr9	64024794	64026189	protein_coding	Rpl4	exon	ENSMUSG00000032399	ProperStrand	608	chr11	98878344	98878430	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	2	-3.6185
chr17	39985437	39985483	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	chr11	6519853	6519943	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-1.1944
chr5	135700911	135700936	protein_coding	Baz1b	intron	ENSMUSG00000002748	ProperStrand	83	chr18	35716839	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.6556
chr17	26219918	26219959	protein_coding	Decr2	exon	ENSMUSG00000036775	ProperStrand	8	chr16	23110457	23110557	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	8	-inf
chr14	55204573	55204793	protein_coding	4931414P19Rik	exon	ENSMUSG00000022179	ProperStrand	8	chr11	69483181	69483271	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-6.3191
chr10	90584784	90586390	protein_coding	Slc25a3	exon	ENSMUSG00000061904	ProperStrand	74	chr1	162968446	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-5.6672
chr10	79501297	79502348	protein_coding	Polr2e	exon	ENSMUSG00000004667	ProperStrand	37	chr11	116535507	116535534	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	1	-6.8688
chr1	158464610	158464629	SINE	B3	B2	chr1B3158464423	ProperStrand	1	chr8	73419672	73419772	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-inf
chr13	64245468	64245548	protein_coding	Zfp367	exon	ENSMUSG00000044934	ProperStrand	34	chr8	98269959	98270049	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-6.6641
chr2	47962755	47962773	lincRNA	Gm13481	intron	ENSMUSG00000086353	NonProperStrand	36	chr11	6428102	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-4.1415
chr19	8797487	8797554	protein_coding	Slc3a2	exon	ENSMUSG00000010095	ProperStrand	63	chr13	53437794	53437811	protein_coding	Sptlc1	intron	ENSMUSG00000021468	ProperStrand	33	1	-14.4197
chr7	53089954	53089975	protein_coding	Grin2d	intron	ENSMUSG00000002771	NonProperStrand	31	chr3	96527940	96527956	protein_coding	Polr3c	exon	ENSMUSG00000028099	NonProperStrand	75	1	-14.1993
chr18	17460635	17460652	LINE	Lx3_Mus	L1	chr18Lx3_Mus17459823	ProperStrand	1	chr18	33954816	33954883	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-inf
chr1	102076758	102076793	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	chr7	118219574	118219609	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-0.9802
chr6	65755969	65756019	protein_coding	Prdm5	intron	ENSMUSG00000029913	ProperStrand	50	chr2	26494750	26494840	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.4386
chr6	47738066	47738126	misc_RNA	Y_RNA	.	ENSMUSG00000065701	ProperStrand	129	chr2	26768049	26768118	snoRNA	ENSMUSG00000065295_SNORD36	.	ENSMUSG00000065295	ProperStrand	702	2	-11.0593
chr16	23111369	23111508	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	chr11	6428035	6428169	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	278	-inf
chr10	79189364	79189384	protein_coding	Hcn2	intron	ENSMUSG00000020331	NonProperStrand	4	chr14	65372822	65372889	snoRNA	ENSMUSG00000064442_SNORA36	.	ENSMUSG00000064442	ProperStrand	296	2	-19.1906
chr5	125936587	125936673	protein_coding	Bri3bp	utr3	ENSMUSG00000037905	ProperStrand	43	chr13	49779747	49779802	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	1	-7.6783
chr11	49698807	49698907	protein_coding	Mapk9	utr3	ENSMUSG00000020366	ProperStrand	20	chr11	62416575	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-7.3487
chr7	25704339	25704399	protein_coding-noncoding	Arhgef1	utr5	ENSMUSG00000040940	ProperStrand	1	chr1	89673570	89673670	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-inf
chr6	15595713	15595793	LTR	MT2A	ERVL	chr6MT2A15595520	NonProperStrand	1	chr6	15595311	15595401	LTR	RLTR12B	ERVK	chr6RLTR12B15595072	NonProperStrand	1	1	-inf
chr19	30188268	30189678	protein_coding	Gldc	exon	ENSMUSG00000024827	ProperStrand	175	chr13	23647509	23647599	protein_coding	Hist1h1d	exon	ENSMUSG00000052565	ProperStrand	78	1	-10.6381
chr9	120037971	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	chr16	18240811	18240924	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	2	-2.2112
chr7	133941288	133942656	protein_coding	Aldoa	utr5	ENSMUSG00000030695	ProperStrand	721	chr11	98878344	98878414	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	5	-8.9272
chr2	4544718	4544734	protein_coding	Prpf18	utr3	ENSMUSG00000039449	NonProperStrand	66	chr17	24665444	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-4.7568
chrX	151524170	151524186	protein_coding	Magea1	exon	ENSMUSG00000059539	ProperStrand	1	chr2	63936034	63936052	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-inf
chr11	53083296	53083323	protein_coding	Hspa4	exon	ENSMUSG00000020361	ProperStrand	69	chr1	162967514	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-3.2194
chr16	23111952	23111977	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr11	62416630	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-1.3932
chr8	46574570	46574650	LTR	RLTR17	ERVK	chr8RLTR1746574470	NonProperStrand	1	chr8	46574742	46574832	LTR	RLTR46	ERVK	chr8RLTR4646574630	NonProperStrand	1	1	-inf
chr12	110787939	110787956	lincRNA	Meg3	exon	ENSMUSG00000021268	ProperStrand	61	chr13	49063042	49063124	protein_coding	Fam120a	exon	ENSMUSG00000038014	ProperStrand	76	3	-19.3303
chr13	49218439	49218456	protein_coding	Wnk2	intron	ENSMUSG00000037989	NonProperStrand	67	chr3	123210862	123210911	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-3.4445
chr9	15119972	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	chr16	18240844	18240937	snoRNA	ENSMUSG00000080364_SNORA77	.	ENSMUSG00000080364	ProperStrand	486	3	-8.1080
chr3	135488731	135488788	protein_coding	Slc39a8	utr5	ENSMUSG00000053897	ProperStrand	7	chr10	23505152	23505218	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-5.0629
chr2	127055232	127063819	protein_coding	Snrnp200	exon	ENSMUSG00000003660	ProperStrand	203	chr4	131865381	131865482	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	2	-3.3971
chr9	106109247	106109275	protein_coding	Twf2	exon	ENSMUSG00000023277	ProperStrand	10	chr16	76290355	76290372	protein_coding	Nrip1	utr3	ENSMUSG00000048490	NonProperStrand	9	2	-20.5112
chr11	8333915	8334005	protein_coding	Tns3	utr3	ENSMUSG00000020422	ProperStrand	81	chr12	100957067	100957147	protein_coding	2610021K21Rik	utr3	ENSMUSG00000021176	ProperStrand	12	1	-16.0118
chr3	90197173	90197671	protein_coding	Ints3	exon	ENSMUSG00000027933	ProperStrand	87	chr2	91436261	91436335	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-6.7591
chr1	71341491	71341509	protein_coding	Abca12	exon	ENSMUSG00000050296	NonProperStrand	143	chr16	23110455	23110517	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.1323
chr8	97197022	97197089	protein_coding	Arl2bp	utr3	ENSMUSG00000031776	ProperStrand	2	chr1	94755227	94755243	protein_coding	Gpc1	utr3	ENSMUSG00000034220	ProperStrand	30	2	-inf
chr7	118216230	118216263	protein_coding	Eif4g2	exon	ENSMUSG00000005610	ProperStrand	134	chr2	120872244	120872260	protein_coding	Tgm5	exon	ENSMUSG00000053675	NonProperStrand	163	1	-9.6958
chr2	91473178	91473232	protein_coding	F2	exon	ENSMUSG00000027249	ProperStrand	3	chr12	80169008	80169025	protein_coding	Plekhh1	exon	ENSMUSG00000060716	ProperStrand	24	1	-inf
chr19	60631204	60631273	protein_coding	2700078E11Rik	intron	ENSMUSG00000033417	ProperStrand	12	chr1	162966812	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-9.5141
chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	chr8	113362430	113362489	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	1	-5.0739
chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	chr7	13516163	13516200	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	2	-7.6759
chr1	90598740	90598756	protein_coding	Arl4c	utr5	ENSMUSG00000049866	ProperStrand	25	chr2	74582202	74582218	protein_coding	Hoxd3	exon	ENSMUSG00000079277	NonProperStrand	14	1	-18.5427
chr4	56815648	56815690	protein_coding-noncoding	BC026590	utr5	ENSMUSG00000038827	ProperStrand	1	chrX	138159145	138159161	protein_coding	Irs4	exon	ENSMUSG00000054667	NonProperStrand	98	1	-inf
chr13	9833556	9833653	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr9	15130730	15131005	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	2	-2.6041
chr12	73637459	73637525	protein_coding	1810048J11Rik	utr5	ENSMUSG00000034501	ProperStrand	11	chr18	73693169	73693189	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-8.9451
chr13	20721434	20721514	LINE	L1_Mur3	L1	chr13L1_Mur320721362	ProperStrand	1	chr13	20721012	20721102	LINE	L1_Rod	L1	chr13L1_Rod20720182	ProperStrand	1	1	-inf
chr13	49162633	49218455	protein_coding	Wnk2	exon	ENSMUSG00000037989	NonProperStrand	67	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	2	-12.0467
chr5	108334195	108334265	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	chr16	23109064	23109089	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	3	-1.2210
chr4	79649209	79649238	pseudogene	Gm11407	.	ENSMUSG00000082179	ProperStrand	26	chr18	35716831	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-3.6526
chr2	158185528	158185565	lincRNA	9430008C03Rik	exon	ENSMUSG00000085385	ProperStrand	1039	chr5	144955576	144955598	protein_coding	Tecpr1	utr3	ENSMUSG00000066621	ProperStrand	9	2	-17.9631
chr5	143755203	143755219	protein_coding	Rnf216	exon	ENSMUSG00000045078	ProperStrand	38	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-2.5179
chr19	6374138	6374226	protein_coding	Sf1	exon	ENSMUSG00000024949	ProperStrand	251	chr9	78326988	78327123	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-3.5875
chr17	56564374	56565832	protein_coding	Ptprs	exon	ENSMUSG00000013236	ProperStrand	152	chr4	68423440	68423456	protein_coding	Dbc1	exon	ENSMUSG00000028351	ProperStrand	78	1	-10.9203
chr7	53560944	53561188	protein_coding	Otog	exon	ENSMUSG00000009487	ProperStrand	17	chr13	21292132	21292158	tRNA	tRNA65-LeuCAA	.	529723	ProperStrand	57	1	-15.9428
chr19	8798535	8798563	lincRNA	Snhg1	exon	ENSMUSG00000090867	ProperStrand	100	chr18	35716788	35716879	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-2.6179
chr15	97832943	97832991	protein_coding	Col2a1	intron	ENSMUSG00000022483	ProperStrand	34	chr12	17436672	17436764	protein_coding	Nol10	utr3	ENSMUSG00000061458	ProperStrand	31	1	-15.7472
chr2	179710274	179710290	protein_coding	Taf4a	exon	ENSMUSG00000039117	NonProperStrand	8	chr19	8897366	8897752	protein_coding	Hnrnpul2	exon	ENSMUSG00000071659	ProperStrand	93	1	-16.4857
chr5	151847714	151847739	protein_coding	Stard13	exon	ENSMUSG00000016128	ProperStrand	11	chr16	23110876	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.6241
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr11	72257334	72260519	protein_coding	Mybbp1a	exon	ENSMUSG00000040463	ProperStrand	279	2	-6.6266
chr5	109124122	109132306	protein_coding	Fgfrl1	exon	ENSMUSG00000008090	ProperStrand	111	chr14	76247759	76247793	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-3.0382
chr12	29249118	29249134	protein_coding	Allc	exon	ENSMUSG00000020636	ProperStrand	2	chr10	23505259	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-8.0476
chr8	125304208	125304246	protein_coding	Acsf3	exon	ENSMUSG00000015016	ProperStrand	12	chr13	23492662	23492698	tRNA	tRNA966-AlaAGC	.	1096736	ProperStrand	20	1	-18.6218
chr5	147646411	147646463	snoRNA	ENSMUSG00000077185_SNORD102	.	ENSMUSG00000077185	ProperStrand	142	chr8	73419656	73419718	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-1.6857
chr13	59932957	59932973	LINE	L1_Mur3	L1	chr13L1_Mur359932072	ProperStrand	32	chr17	26978075	26978092	protein_coding	Nkx2-5	exon	ENSMUSG00000015579	ProperStrand	5	1	-19.1153
chr17	89408214	89408230	protein_coding	Fshr	intron	ENSMUSG00000032937	NonProperStrand	29	chr10	23505221	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-2.3586
chr18	37047251	37047271	LINE	Lx3_Mus	L1	chr18Lx3_Mus37046262	ProperStrand	1	chr19	8799363	8799433	snoRNA	ENSMUSG00000065280_SNORD28	.	ENSMUSG00000065280	ProperStrand	269	1	-inf
chr6	128277559	128277627	protein_coding	Tulp3	exon	ENSMUSG00000001521	ProperStrand	18	chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	1	-11.7163
chr8	124475493	124475509	protein_coding	Banp	intron	ENSMUSG00000025316	NonProperStrand	34	chr18	33954874	33954904	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-4.5779
chr13	9833551	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr9	78326456	78327713	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	9	-4.6099
chr13	9833565	9833616	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr19	3708416	3708432	protein_coding	1810055G02Rik	utr5	ENSMUSG00000035372	ProperStrand	5	2	-16.1772
chr14	119693352	119693368	protein_coding	Hs6st3	intron	ENSMUSG00000053465	NonProperStrand	134	chr15	34370631	34370664	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-2.1417
chr11	29593519	29593619	protein_coding	Rtn4	exon	ENSMUSG00000020458	ProperStrand	117	chr8	98269959	98270013	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	4	-13.6056
chr7	17046289	17046380	protein_coding	Npas1	intron	ENSMUSG00000001988	ProperStrand	88	chr17	39985358	39985438	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	86	-inf
chr3	95551453	95551476	protein_coding	Tars2	exon	ENSMUSG00000028107	ProperStrand	26	chr18	15032622	15032692	protein_coding	Taf4b	intron	ENSMUSG00000054321	ProperStrand	8	3	-20.8115
chr2	32881629	32881645	protein_coding	Garnl3	exon	ENSMUSG00000038860	NonProperStrand	54	chr15	71624758	71624797	snoRNA	ENSMUSG00000088895_SNORA81	.	ENSMUSG00000088895	ProperStrand	348	1	-10.0033
chr5	144909162	144917755	protein_coding	Lmtk2	exon	ENSMUSG00000038970	ProperStrand	60	chrX	34622906	34622947	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-3.1711
chr11	6428088	6428156	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr7	51505509	51505592	snoRNA	ENSMUSG00000080373_Snord88a	.	ENSMUSG00000080373	ProperStrand	578	3	-0.9901
chr2	90235295	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	147385125	147385141	protein_coding	Clcn6	exon	ENSMUSG00000029016	ProperStrand	120	1	-3.1734
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr18	38794101	38794118	protein_coding	Arhgap26	intron	ENSMUSG00000036452	ProperStrand	46	1	-9.1266
chr11	72740118	72740165	protein_coding	Zzef1	utr3	ENSMUSG00000055670	ProperStrand	48	chr18	35716810	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-6.7261
chr11	69652938	69652980	protein_coding	1810027O10Rik	exon	ENSMUSG00000070394	ProperStrand	2	chr5	111121109	111121199	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-13.8770
chr5	96504245	96504335	protein_coding	Cnot6l	utr3	ENSMUSG00000034724	ProperStrand	3	chr4	131865869	131865949	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.6896
chr11	115871587	115871606	protein_coding	Galk1	exon	ENSMUSG00000020766	ProperStrand	24	chr9	120038555	120038673	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	3	-11.4139
chr10	57211376	57211456	protein_coding	Hsf2	intron	ENSMUSG00000019878	NonProperStrand	1	chr4	8534292	8534382	protein_coding	Rab2a	utr3	ENSMUSG00000047187	ProperStrand	23	1	-inf
chr14	55233075	55233116	protein_coding	Psmb5	exon	ENSMUSG00000022193	ProperStrand	14	chr4	56910547	56910618	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	2	-14.4315
chr17	31658540	31658563	protein_coding	Ndufv3	exon	ENSMUSG00000024038	ProperStrand	9	chr5	111127922	111129627	protein_coding	Ep400	exon	ENSMUSG00000029505	ProperStrand	176	1	-15.0378
chr1	174437069	174437138	protein_coding	Tagln2	utr3	ENSMUSG00000026547	ProperStrand	39	chr5	121655036	121655126	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.5640
chr11	86508912	86508929	protein_coding	Cltc	utr3	ENSMUSG00000047126	NonProperStrand	2	chr1	162965531	162965564	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-10.5602
chr18	25451824	25451840	protein_coding	AW554918	intron	ENSMUSG00000033632	NonProperStrand	3	chr15	79908930	79909018	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-11.7928
chr1	72871434	72871534	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	chr7	52381972	52381996	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-3.0646
chr7	20282300	20282367	protein_coding	Apoe	exon	ENSMUSG00000002985	ProperStrand	231	chr9	15118245	15118321	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	3	-3.7931
chr9	24549598	24549619	protein_coding	Tbx20	intron	ENSMUSG00000031965	NonProperStrand	110	chr5	74489595	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	4	-9.4864
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr19	17900101	17900117	snoRNA	ENSMUSG00000089540_snoU13	.	ENSMUSG00000089540	ProperStrand	99	1	-4.9282
chr17	25296587	25296603	protein_coding	Clcn7	exon	ENSMUSG00000036636	ProperStrand	94	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.4840
chr2	86138158	86138174	protein_coding	Olfr1052	exon	ENSMUSG00000047149	NonProperStrand	119	chr1	9932599	9932625	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-6.3712
chr16	62929058	62929139	protein_coding	Pros1	utr3	ENSMUSG00000022912	ProperStrand	20	chr7	29136635	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-4.3737
chr1	163019290	163019317	protein_coding	Klhl20	utr3	ENSMUSG00000026705	ProperStrand	11	chr12	88778631	88778715	snoRNA	ENSMUSG00000064938_SNORA58	.	ENSMUSG00000064938	ProperStrand	1831	1	-9.9385
chr8	13175097	13175124	protein_coding	Lamp1	utr3	ENSMUSG00000031447	ProperStrand	92	chr19	8963032	8963048	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-9.2980
chr7	34993295	35000986	protein_coding	Gpi1	exon	ENSMUSG00000036427	ProperStrand	288	chr4	53873623	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	1	-5.9337
chr16	4886395	4886411	protein_coding	Mgrn1	exon	ENSMUSG00000022517	NonProperStrand	157	chr17	29832983	29833065	protein_coding	1110021J02Rik	intron	ENSMUSG00000024018	ProperStrand	7	1	-15.8414
chr10	22990136	22990154	protein_coding	Eya4	intron	ENSMUSG00000010461	NonProperStrand	21	chr3	123210885	123210982	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-3.9390
chr11	60592532	60592632	protein_coding	Smcr8	exon	ENSMUSG00000049323	ProperStrand	46	chr19	8798744	8798814	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-5.3169
chr12	109460710	109460726	protein_coding	Ccdc85c	intron	ENSMUSG00000084883	ProperStrand	157	chr11	62416575	62416650	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-3.3505
chr6	127037319	127037343	protein_coding	9630033F20Rik	utr3	ENSMUSG00000038028	ProperStrand	10	chr5	108334258	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	2	-13.5411
chr10	59978401	59978422	protein_coding	Cdh23	intron	ENSMUSG00000012819	ProperStrand	16	chr15	36933576	36936981	protein_coding	Zfp706	utr5	ENSMUSG00000062397	ProperStrand	6	1	-19.5178
chr2	118611946	118611962	protein_coding	Disp2	exon	ENSMUSG00000040035	NonProperStrand	204	chr9	120038491	120038529	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-2.1465
chr12	100023549	100023613	protein_coding	Zc3h14	exon	ENSMUSG00000021012	ProperStrand	27	chr14	121870455	121870471	protein_coding	Slc15a1	intron	ENSMUSG00000025557	NonProperStrand	5	1	-19.7151
chr12	31950200	31950216	protein_coding	Lamb1	utr5	ENSMUSG00000002900	ProperStrand	87	chr10	86153808	86153852	protein_coding	Hsp90b1	utr3	ENSMUSG00000020048	ProperStrand	396	1	-8.7889
chr19	8963179	8963218	miRNA	Mir5136	.	ENSMUSG00000093314	ProperStrand	45	chr18	35714208	35714262	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-3.9783
chr7	133706601	133707152	protein_coding	Eif3c	exon	ENSMUSG00000030738	ProperStrand	92	chr18	33954817	33954897	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-2.7379
chr4	133183193	133183266	protein_coding	Zdhhc18	exon	ENSMUSG00000037553	ProperStrand	51	chr15	5068413	5068478	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-6.3880
chr2	25231264	25231490	protein_coding	2010317E24Rik	exon	ENSMUSG00000026955	ProperStrand	5	chr6	115758001	115758081	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-10.5899
chr4	118809089	118809115	protein_coding	Slc2a1	utr3	ENSMUSG00000028645	ProperStrand	361	chr10	39641799	39641815	protein_coding	2010001E11Rik	exon	ENSMUSG00000039339	NonProperStrand	8	1	-13.8558
chr7	29136046	29137261	protein_coding	Rps16	exon	ENSMUSG00000037563	ProperStrand	191	chr9	15118350	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-1.5206
chr17	27771336	27772178	protein_coding	Rps10	exon	ENSMUSG00000052146	ProperStrand	94	chr2	145077957	145209255	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-6.8308
chr2	127043685	127044117	protein_coding	Snrnp200	exon	ENSMUSG00000003660	ProperStrand	203	chr2	158205317	158205397	snoRNA	ENSMUSG00000064585_SNORA71	.	ENSMUSG00000064585	ProperStrand	418	1	-6.9966
chr16	30514154	30514171	protein_coding	Tmem44	utr3	ENSMUSG00000022537	ProperStrand	217	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.1943
chr2	24910034	24910050	protein_coding	Nelf	utr5	ENSMUSG00000006476	NonProperStrand	20	chr16	23111383	23111418	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.0472
chr7	35983752	35983768	protein_coding	Slc7a10	exon	ENSMUSG00000030495	NonProperStrand	33	chr6	72389395	72389467	protein_coding	Mat2a	utr5	ENSMUSG00000053907	ProperStrand	51	1	-14.8410
chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	chr12	110887828	110887856	snoRNA	ENSMUSG00000084549_SNORD113	.	ENSMUSG00000084549	ProperStrand	196	1	-6.2556
chr5	136611800	136611816	protein_coding	Lrwd1	exon	ENSMUSG00000029703	NonProperStrand	51	chr10	90432659	90432679	protein_coding	Anks1b	utr3	ENSMUSG00000058589	NonProperStrand	230	1	-10.9460
chr13	55348545	55348563	protein_coding	Nsd1	exon	ENSMUSG00000021488	ProperStrand	186	chr7	117189944	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	7	-12.2215
chr13	73757763	73757818	protein_coding	Clptm1l	utr3	ENSMUSG00000021610	ProperStrand	11	chr4	131908236	131908315	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-10.9135
chr2	158182156	158182180	lincRNA	9430008C03Rik	intron	ENSMUSG00000085385	ProperStrand	1039	chr7	52383013	52383133	protein_coding-noncoding	Rpl13a	utr3	ENSMUSG00000074129	ProperStrand	106	3	-14.7590
chr10	33574101	33574117	LINE	L1_Mur2	L1	chr10L1_Mur233574085	NonProperStrand	1	chr8	32260351	32260372	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-inf
chr3	54611419	54611437	protein_coding	Rfxap	exon	ENSMUSG00000036615	NonProperStrand	6	chr4	62893445	62893463	protein_coding	Col27a1	intron	ENSMUSG00000045672	ProperStrand	32	1	-18.4283
chr14	89861373	89861463	LINE	Lx	L1	chr14Lx89861035	NonProperStrand	1	chr14	89861530	89861610	LINE	Lx	L1	chr14Lx89861442	NonProperStrand	1	1	-inf
chr3	144748059	144749264	protein_coding	Clca5	exon	ENSMUSG00000036960	ProperStrand	86	chr5	108334195	108334304	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-4.1330
chr8	125628978	125629053	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	chr16	37777391	37777408	protein_coding	Fstl1	exon	ENSMUSG00000022816	ProperStrand	179	2	-13.3939
chr4	133403989	133404005	protein_coding	Rps6ka1	exon	ENSMUSG00000003644	ProperStrand	68	chr4	131865883	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.5775
chr4	134898369	134898392	protein_coding	Srrm1	exon	ENSMUSG00000028809	ProperStrand	142	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-5.2901
chr7	28146782	28146798	protein_coding	Spnb4	exon	ENSMUSG00000011751	NonProperStrand	84	chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	1	-8.5352
chr14	45903819	45903836	protein_coding	Ero1l	utr3	ENSMUSG00000021831	ProperStrand	18	chr7	116663695	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-7.9214
chr16	20560445	20560487	protein_coding	Abcf3	exon	ENSMUSG00000003234	ProperStrand	6	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	1	-11.7719
chr2	174259160	174263747	protein_coding	Ctsz	exon	ENSMUSG00000016256	ProperStrand	13	chr19	8800356	8800436	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	2	-10.6361
chr15	76010728	76010745	protein_coding	Plec	exon	ENSMUSG00000022565	ProperStrand	186	chr17	39985621	39985665	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-3.7619
chr10	43559803	43559820	LINE	Lx8	L1	chr10Lx843559786	ProperStrand	1	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr19	8800424	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	chr12	110874223	110874290	snoRNA	ENSMUSG00000088294_AF357425	.	ENSMUSG00000088294	ProperStrand	317	5	-5.7585
chr3	136950454	136950478	LTR	RLTR44E	ERVK	chr3RLTR44E136950458	ProperStrand	4	chr8	73419683	73419788	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-8.6136
chr12	25393174	25393264	protein_coding	Rrm2	utr5	ENSMUSG00000020649	ProperStrand	65	chr10	110918548	110918628	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-3.3024
chrX	107396011	107396027	LTR	RMER17A	ERVK	chrXRMER17A107395334	NonProperStrand	27	chr17	25081513	25081567	protein_coding	Hn1l	exon	ENSMUSG00000024165	ProperStrand	45	1	-15.5110
chr2	90235286	90235326	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr3	129598520	129598537	protein_coding	Pla2g12a	utr3	ENSMUSG00000027999	NonProperStrand	10	2	-12.9834
chr19	42405846	42405863	protein_coding	Crtac1	intron	ENSMUSG00000042401	NonProperStrand	17	chr1	88247811	88247876	snoRNA	ENSMUSG00000064837_Snora75	.	ENSMUSG00000064837	ProperStrand	3759	1	-7.6080
chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-1.2815
chr6	100816015	100816077	protein_coding	Ppp4r2	exon	ENSMUSG00000052144	ProperStrand	7	chr2	26493376	26493466	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	5	-inf
chr14	51427119	51427200	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr1	136521446	136521525	protein_coding	Kdm5b	utr5	ENSMUSG00000042207	ProperStrand	223	1	-4.6418
chr17	29018077	29018093	protein_coding	Pnpla1	exon	ENSMUSG00000043286	NonProperStrand	22	chr2	120611777	120611793	protein_coding	Ttbk2	exon	ENSMUSG00000090100	ProperStrand	50	1	-15.7017
chr7	121559124	121559214	protein_coding	Pde3b	exon	ENSMUSG00000030671	ProperStrand	16	chr8	73419713	73419787	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-5.6620
chr15	88842499	88842569	protein_coding	Mov10l1	exon	ENSMUSG00000015365	ProperStrand	22	chr9	15119722	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	4	-14.4993
chr2	29002173	29002203	protein_coding	Setx	exon	ENSMUSG00000043535	ProperStrand	187	chr9	15119968	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	2	-8.2644
chr5	111816985	111817085	protein_coding	Pitpnb	utr3	ENSMUSG00000050017	ProperStrand	137	chr6	97112810	97112883	snoRNA	ENSMUSG00000065728_SNORA36	.	ENSMUSG00000065728	ProperStrand	158	1	-9.7138
chr12	9431908	9431988	Simple_repeat	(AGCTG)n	Simple_repeat	chr12(AGCTG)n9431924	ProperStrand	1	chr12	9432083	9432173	Simple_repeat	(CAGAA)n	Simple_repeat	chr12(CAGAA)n9432011	ProperStrand	1	1	-inf
chr6	127415403	127415503	protein_coding	Parp11	intron	ENSMUSG00000037997	ProperStrand	5	chr9	15118323	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-8.4764
chr17	21102541	21102622	protein_coding	Ppp2r1a	utr3	ENSMUSG00000007564	ProperStrand	57	chr1	162968483	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-6.1802
chr7	13507677	13507713	protein_coding	Rps5	utr5	ENSMUSG00000012848	ProperStrand	108	chr19	8799053	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-4.6913
chr9	61762201	61762235	protein_coding	Rplp1	exon	ENSMUSG00000007892	ProperStrand	116	chr10	41644311	41644329	protein_coding	Armc2	exon	ENSMUSG00000071324	ProperStrand	281	1	-8.8972
chr5	74489216	74489306	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr2	120357935	120371619	protein_coding	Zfp106	exon	ENSMUSG00000027288	ProperStrand	199	2	-5.7079
chrX	72661762	72661779	protein_coding	Mtcp1	utr5	ENSMUSG00000090110	ProperStrand	19	chr11	62418037	62418088	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-7.8529
chr14	32539812	32539912	protein_coding	Ankrd28	intron	ENSMUSG00000014496	ProperStrand	39	chr5	130458505	130458538	protein_coding	Vkorc1l1	utr3	ENSMUSG00000066735	ProperStrand	8	1	-17.6839
chr2	150740977	150741077	protein_coding	Gins1	intron	ENSMUSG00000027454	ProperStrand	51	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	2	-6.5873
chr9	65497226	65507900	protein_coding	Rbpms2	exon	ENSMUSG00000032387	ProperStrand	85	chr16	23111394	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-1.6713
chr14	55057856	55057872	protein_coding	Mmp14	exon	ENSMUSG00000000957	ProperStrand	61	chr9	78215804	78215864	protein_coding	Dppa5a	exon	ENSMUSG00000060461	ProperStrand	79	1	-12.7281
chr5	115939527	115939566	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	chr8	129468789	129468879	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	8	-6.7283
chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr9	120037980	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	2	-3.7811
chr13	38602024	38602051	protein_coding	Txndc5	exon	ENSMUSG00000038991	ProperStrand	48	chr7	116664819	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	4	-10.2599
chr9	30235085	30235102	protein_coding	Snx19	exon	ENSMUSG00000031993	ProperStrand	353	chr7	116663633	116663768	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	4	-1.9124
chr15	81853330	81853420	protein_coding	Xrcc6	exon	ENSMUSG00000022471	ProperStrand	34	chr18	35716705	35716785	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-8.0530
chr19	53928042	53928058	protein_coding	Rbm20	exon	ENSMUSG00000043639	NonProperStrand	5	chr16	23110984	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr4	133521935	133522693	protein_coding	Hmgn2	exon	ENSMUSG00000003038	ProperStrand	20	chr8	98269992	98270072	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-7.7325
chr7	26556230	26556247	protein_coding	Axl	intron	ENSMUSG00000002602	ProperStrand	6	chr16	23110963	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.7876
chr12	88614599	88614629	protein_coding	Ahsa1	exon	ENSMUSG00000021037	ProperStrand	58	chr6	115758029	115758119	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-5.5382
chr18	38410796	38410937	protein_coding	0610009O20Rik	exon	ENSMUSG00000024442	ProperStrand	25	chr2	26493462	26493487	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-5.4265
chr6	83069255	83069355	protein_coding	Wbp1	exon	ENSMUSG00000030035	ProperStrand	3	chr10	69644972	69650470	protein_coding	Ccdc6	exon	ENSMUSG00000048701	ProperStrand	72	1	-20.1543
chr7	13510784	13510807	protein_coding	Rps5	exon	ENSMUSG00000012848	ProperStrand	108	chr4	131865938	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-0.9473
chr8	38049667	38049683	LTR	MLT1A0	MaLR	chr8MLT1A038049422	NonProperStrand	91	chr16	23111447	23111505	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.7425
chr11	55296311	55296364	protein_coding	G3bp1	intron	ENSMUSG00000018583	ProperStrand	106	chr11	55296277	55296310	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	2	-8.3399
chr7	29093168	29093243	protein_coding	Timm50	exon	ENSMUSG00000003438	ProperStrand	6	chr2	158182157	158182200	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-9.7005
chr3	65128506	65128522	protein_coding	Kcnab1	intron	ENSMUSG00000027827	NonProperStrand	7	chr5	143648750	143650352	protein_coding	Fbxl18	exon	ENSMUSG00000066640	ProperStrand	64	1	-17.4896
chr2	164226383	164226400	protein_coding	Matn4	exon	ENSMUSG00000016995	ProperStrand	15	chr4	4690447	4690508	protein_coding	Impad1	utr3	ENSMUSG00000066324	ProperStrand	23	1	-17.8173
chr4	86501849	86502070	protein_coding	Rps6	exon	ENSMUSG00000028495	ProperStrand	263	chr11	68886951	68887031	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-1.5874
chr14	25007940	25007975	protein_coding	Dlg5	intron	ENSMUSG00000021782	ProperStrand	46	chr2	103588240	103588355	protein_coding	Nat10	exon	ENSMUSG00000027185	NonProperStrand	64	1	-13.7175
chr11	78032681	78032771	protein_coding	Supt6h	exon	ENSMUSG00000002052	ProperStrand	119	chr9	15119637	15119717	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.5249
chr1	71675045	71675924	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr7	117189864	117189932	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	2	-2.4930
chr15	18774742	18774758	protein_coding	Cdh10	intron	ENSMUSG00000022321	NonProperStrand	9	chr19	8800355	8800420	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-7.2762
chr13	9833566	9833665	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr10	23505559	23505621	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	2	-0.9524
chr2	76471660	76471676	protein_coding	Prkra	exon	ENSMUSG00000002731	NonProperStrand	65	chr16	20673984	20674335	protein_coding	Eif4g1	exon	ENSMUSG00000045983	ProperStrand	199	1	-10.7473
chr4	21656322	21656394	protein_coding	Ccnc	intron	ENSMUSG00000028252	ProperStrand	9	chrX	166428178	166428211	protein_coding	Mid1	utr3	ENSMUSG00000035299	ProperStrand	209	2	-19.1270
chr19	23332023	23332040	protein_coding	Smc5	exon	ENSMUSG00000024943	ProperStrand	146	chr12	110918155	110918182	snoRNA	ENSMUSG00000065749_AF357428	.	ENSMUSG00000065749	ProperStrand	218	1	-8.9440
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr17	13112480	13112584	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	3	-0.9312
chr5	135857995	135858011	protein_coding	Pom121	exon	ENSMUSG00000053293	NonProperStrand	94	chr11	69481104	69481242	protein_coding	Eif4a1	exon	ENSMUSG00000059796	ProperStrand	108	1	-11.2302
chr13	9833554	9833681	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr3	153575089	153575115	protein_coding	Rabggtb	utr5	ENSMUSG00000038975	ProperStrand	667	1	-0.9077
chr4	149309900	149309975	protein_coding	Spsb1	intron	ENSMUSG00000039911	ProperStrand	15	chr7	117189991	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	5	-21.6817
chr11	50114438	50115274	protein_coding	Canx	exon	ENSMUSG00000020368	ProperStrand	296	chr1	93263065	93263081	protein_coding	Fam132b	exon	ENSMUSG00000047443	NonProperStrand	98	1	-9.1307
chr12	4213731	4213815	protein_coding	Cenpo	utr3	ENSMUSG00000020652	ProperStrand	6	chr16	23110491	23110581	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	5	-19.7022
chr8	130136044	130136146	protein_coding	Pard3	utr3	ENSMUSG00000025812	ProperStrand	44	chr2	166890532	166890559	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-8.1781
chrX	98865137	98865209	protein_coding	Ogt	exon	ENSMUSG00000034160	ProperStrand	49	chr4	131865428	131865513	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-4.3863
chr19	8798741	8798812	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	chr3	95980314	95980410	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	4	-1.3406
chr11	116016097	116016113	protein_coding	Fbf1	exon	ENSMUSG00000020776	NonProperStrand	36	chr16	23110828	23110867	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.8249
chr17	95160910	95218243	Satellite	MMSAT4	Satellite	chr17MMSAT495216724	NonProperStrand	14	chr4	131908236	131908286	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.9265
chr16	21892122	21930693	protein_coding	Map3k13	utr3	ENSMUSG00000033618	ProperStrand	16	chr16	23110984	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-10.5245
chr2	69193692	69193720	LINE	L1Md_F2	L1	chr2L1Md_F269191897	NonProperStrand	7	chr9	15119725	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-6.8089
chr2	179322380	179322400	protein_coding	Cdh4	intron	ENSMUSG00000000305	NonProperStrand	10	chr8	42078584	42078612	protein_coding	Mtus1	utr3	ENSMUSG00000045636	NonProperStrand	5	1	-19.5370
chr11	6428104	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	NonProperStrand	91	chr4	131865471	131865515	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	NonProperStrand	15	1	-15.3042
chr15	78259253	78259269	protein_coding	Kctd17	exon	ENSMUSG00000033287	NonProperStrand	26	chr5	65780779	65780824	protein_coding	Rpl9	exon	ENSMUSG00000047215	ProperStrand	113	1	-13.7414
chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr5	31190509	31190545	tRNA	tRNA109-TyrGTA	.	1109605	ProperStrand	64	1	-1.6688
chr10	79756718	79756808	protein_coding	Rps15	exon	ENSMUSG00000063457	ProperStrand	119	chr9	120039544	120039628	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	15	-19.9853
chr4	83131678	83131778	protein_coding	Psip1	utr5	ENSMUSG00000028484	ProperStrand	104	chr11	74718963	74719009	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	1	-7.9259
chr7	134179309	134179409	protein_coding	Kif22	exon	ENSMUSG00000030677	ProperStrand	63	chr4	131908689	131908747	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.1581
chr7	146065030	146065116	protein_coding	Ppp2r2d	intron	ENSMUSG00000041769	ProperStrand	62	chr9	15119736	15119767	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.5729
chr19	4803438	4803455	protein_coding	Rbm14	exon	ENSMUSG00000006456	NonProperStrand	16	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-11.6100
chr10	89245410	89249855	protein_coding	Uhrf1bp1l	exon	ENSMUSG00000019951	ProperStrand	28	chr9	120039646	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	4	-15.1139
chr15	81110991	81111009	SINE	ID4	ID	chr15ID481110956	ProperStrand	272	chr19	8800355	8800463	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-1.0809
chr1	102076758	102076794	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	chr19	8800354	8800481	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	3	-2.1609
chr10	109640049	109640066	SINE	RSINE1	B4	chr10RSINE1109639979	ProperStrand	51	chr13	46862888	46863013	snoRNA	ENSMUSG00000064558_SNORA55	.	ENSMUSG00000064558	ProperStrand	187	1	-11.3604
chr19	6372307	6372359	protein_coding	Sf1	exon	ENSMUSG00000024949	ProperStrand	251	chr7	26153453	26153470	protein_coding	Cnfn	exon	ENSMUSG00000063651	NonProperStrand	2	1	-18.0187
chr11	68915308	68915518	protein_coding	Per1	exon	ENSMUSG00000020893	ProperStrand	46	chr4	132394363	132394401	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	1	-9.6721
chr9	70960076	70960092	protein_coding	Aqp9	exon	ENSMUSG00000032204	NonProperStrand	118	chr4	131866176	131866290	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	3	-6.4922
mmu-miR-6240	2	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr3	96527940	96527956	protein_coding	Polr3c	exon	ENSMUSG00000028099	NonProperStrand	75	1	-5.4666
chr4	116364398	116364488	protein_coding	Prdx1	exon	ENSMUSG00000028691	ProperStrand	41	chr11	19852613	19852646	protein_coding	Spred2	intron	ENSMUSG00000045671	ProperStrand	106	1	-12.9394
chr19	47212757	47212773	protein_coding	Calhm2	utr5	ENSMUSG00000033033	NonProperStrand	6	chr11	106362304	106362336	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-10.5659
chr2	127096472	127096493	protein_coding	Stard7	utr5	ENSMUSG00000027367	ProperStrand	12	chr14	33005146	33005236	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-7.1733
chr4	131825994	131826049	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	ProperStrand	464	chr11	68886974	68887033	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	3	-2.7739
chr7	19661962	19661978	protein_coding	Dmwd	exon	ENSMUSG00000030410	ProperStrand	41	chr17	35087895	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-5.9466
chr10	79746538	79746605	protein_coding	Dazap1	intron	ENSMUSG00000069565	ProperStrand	57	chr4	131865948	131865984	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.8480
chr1	46132859	46132881	protein_coding	Dnahc7b	intron	ENSMUSG00000041144	NonProperStrand	57	chr11	48616650	48616706	snoRNA	ENSMUSG00000064780_Snord95	.	ENSMUSG00000064780	ProperStrand	435	2	-14.9378
chr6	48519349	48519431	protein_coding	Lrrc61	utr3	ENSMUSG00000073096	ProperStrand	4	chr12	112779228	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	3	-19.2869
chr7	29103761	29103797	protein_coding	Supt5h	exon	ENSMUSG00000003435	ProperStrand	123	chr15	34370545	34370607	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-2.2830
chr19	4150557	4150711	protein_coding	Coro1b	exon	ENSMUSG00000024835	ProperStrand	13	chr9	120038497	120038535	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-5.9817
chr17	32351596	32351676	protein_coding	Brd4	exon	ENSMUSG00000024002	ProperStrand	121	chr14	76247752	76247842	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-2.8852
chr4	33376999	33377089	protein_coding-noncoding	Pnrc1	utr3	ENSMUSG00000040128	NonProperStrand	1	chr4	33376873	33376963	protein_coding	Pnrc1	intron	ENSMUSG00000040128	NonProperStrand	3	1	-inf
chr17	26130681	26130756	protein_coding	Rab11fip3	intron	ENSMUSG00000037098	NonProperStrand	8	chr16	23110911	23111001	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-8.6552
chr3	137849424	137849440	protein_coding	4930579F01Rik	utr5	ENSMUSG00000012042	NonProperStrand	156	chr16	23111690	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-1.3387
chr10	90584713	90584750	protein_coding	Slc25a3	exon	ENSMUSG00000061904	ProperStrand	74	chr4	79650172	79650200	pseudogene	Gm11410	.	ENSMUSG00000083219	ProperStrand	47	1	-13.3908
chr6	53768013	53768029	protein_coding	Tril	exon	ENSMUSG00000043496	NonProperStrand	17	chr4	130305550	130305586	snoRNA	ENSMUSG00000065196_Snord85	.	ENSMUSG00000065196	ProperStrand	328	1	-12.4706
chr4	123688290	123688380	LTR	ORR1A3	MaLR	chr4ORR1A3123688157	NonProperStrand	1	chr4	123688507	123688587	LTR	RLTR11A2	ERVK	chr4RLTR11A2123688487	NonProperStrand	1	1	-inf
chr3	95700246	95700263	protein_coding	Aph1a	exon	ENSMUSG00000015750	ProperStrand	11	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-10.3714
chr15	20083400	20083418	LINE	Lx	L1	chr15Lx20083212	NonProperStrand	14	chr1	162967491	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-6.3039
chr4	147475799	147475815	protein_coding	2610109H07Rik	utr3	ENSMUSG00000029005	ProperStrand	6	chr9	56775853	56775870	protein_coding	Snx33	utr5	ENSMUSG00000032733	NonProperStrand	116	1	-16.6739
chr15	89201621	89201652	protein_coding	Ncaph2	exon	ENSMUSG00000008690	ProperStrand	65	chr15	98356819	98356901	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	2	-12.1598
chr13	51654819	51654836	protein_coding	Shc3	intron	ENSMUSG00000021448	ProperStrand	50	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-6.2272
chr12	29316594	29318653	protein_coding	Rps7	exon	ENSMUSG00000061477	ProperStrand	129	chr7	116663749	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	3	-3.9439
chr7	152048159	152048673	protein_coding	Fgf4	exon	ENSMUSG00000050917	ProperStrand	66	chr10	80641699	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	1	-7.3582
chr7	130561812	130565111	protein_coding	Lcmt1	exon	ENSMUSG00000030763	ProperStrand	18	chr7	148634760	148634836	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-6.3384
chr8	13416895	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr16	9610567	9610584	protein_coding	Grin2a	intron	ENSMUSG00000059003	NonProperStrand	15	1	-9.2502
chr5	121655016	121655155	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	chr7	116663634	116663769	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	60	-0.7330
chr2	168032335	168032407	protein_coding	Adnp	utr5	ENSMUSG00000051149	NonProperStrand	6	chr9	120037997	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	NonProperStrand	19	1	-19.0985
chr14	8650778	8650868	protein_coding	Flnb	exon	ENSMUSG00000025278	ProperStrand	124	chr5	121655063	121655143	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.4500
chr13	104613417	104613433	protein_coding	Erbb2ip	exon	ENSMUSG00000021709	ProperStrand	21	chr11	97642957	97642977	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-4.3990
chr17	75690723	75690739	protein_coding	Ltbp1	exon	ENSMUSG00000001870	ProperStrand	136	chr7	52382237	52382255	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	1	-6.6566
chr7	117189865	117189930	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr9	64024976	64024998	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	2	-4.1195
chr10	89458031	89458083	protein_coding	Anks1b	intron	ENSMUSG00000058589	ProperStrand	68	chr2	32818840	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-5.2268
chr7	31895791	31899711	protein_coding	Hpn	utr5	ENSMUSG00000001249	ProperStrand	126	chr16	14396506	14396541	protein_coding	Abcc1	exon	ENSMUSG00000023088	ProperStrand	35	1	-12.9131
chr17	45710151	45710207	protein_coding	Hsp90ab1	utr5	ENSMUSG00000023944	ProperStrand	1627	chr18	74938051	74938151	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	ProperStrand	1022	1	-1.5582
chr6	126075509	126075526	protein_coding	Ntf3	intron	ENSMUSG00000049107	NonProperStrand	38	chr19	8963027	8963165	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-5.3119
chr2	121867342	121873209	protein_coding	Eif3j	exon	ENSMUSG00000027236	ProperStrand	15	chr16	23110530	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.0488
chr19	4318559	4318649	protein_coding	Kdm2a	utr3	ENSMUSG00000054611	ProperStrand	71	chr9	120038553	120038633	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.7411
chr11	78077753	78077780	protein_coding	2610507B11Rik	intron	ENSMUSG00000010277	ProperStrand	246	chr6	115757992	115758041	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	1	-2.8303
chr2	23011328	23011344	protein_coding	Mastl	exon	ENSMUSG00000026779	ProperStrand	60	chr7	29136525	29136600	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.3649
chr13	53073980	53073997	protein_coding	Nfil3	intron	ENSMUSG00000056749	NonProperStrand	66	chr17	35089181	35089255	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-5.2993
chr13	11822744	11823920	protein_coding	Ryr2	exon	ENSMUSG00000021313	NonProperStrand	15	chr16	23111694	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	5	-18.4350
chr16	49009598	49009626	protein_coding	C330027C09Rik	intron	ENSMUSG00000033031	ProperStrand	30	chr7	31052802	31052832	protein_coding	Wdr62	exon	ENSMUSG00000037020	ProperStrand	16	1	-17.4052
chr11	6428077	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	NonProperStrand	91	chr3	123210854	123210913	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	NonProperStrand	45	2	-20.2553
chr10	79750972	79751072	protein_coding	Dazap1	utr3	ENSMUSG00000069565	ProperStrand	57	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-4.7551
chr1	132709788	132709804	protein_coding	Fcamr	exon	ENSMUSG00000026415	ProperStrand	8	chr16	23111447	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.8232
chr14	71061146	71061162	protein_coding	Xpo7	utr3	ENSMUSG00000022100	ProperStrand	109	chr1	162967514	162967569	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-4.2721
chr4	23146282	23146300	LINE	L1_Mus1	L1	chr4L1_Mus123142861	ProperStrand	2	chr2	52099645	52099664	protein_coding	Neb	exon	ENSMUSG00000026950	ProperStrand	561	2	-inf
chr1	88423485	88425761	protein_coding	Ptma	exon	ENSMUSG00000026238	NonProperStrand	1	chr16	23110890	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	NonProperStrand	93	1	-inf
chr16	96290148	96290217	protein_coding	Brwd1	exon	ENSMUSG00000022914	ProperStrand	77	chr15	82725617	82725638	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	1	-8.0234
chr11	117634262	117634362	protein_coding	Tmc6	exon	ENSMUSG00000025572	ProperStrand	60	chr4	140277136	140277190	protein_coding	Rcc2	utr3	ENSMUSG00000040945	ProperStrand	228	1	-10.6363
chr2	92227305	92227321	protein_coding	Mapk8ip1	exon	ENSMUSG00000027223	ProperStrand	501	chr4	117898506	117898543	protein_coding	Ptprf	exon	ENSMUSG00000033295	ProperStrand	337	2	-9.2079
chr6	136752825	136752898	protein_coding	Hist4h4	exon	ENSMUSG00000068851	ProperStrand	19	chr2	26494708	26494808	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-5.2936
chr2	127042438	127042483	protein_coding	Snrnp200	exon	ENSMUSG00000003660	ProperStrand	203	chr1	34252802	34254055	protein_coding	Dst	utr5	ENSMUSG00000026131	ProperStrand	461	1	-6.8035
chr4	115726365	115726389	protein_coding	Nsun4	utr5	ENSMUSG00000028706	ProperStrand	2	chr7	29136618	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-9.5181
chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	chr12	55835614	55835704	snRNA	ENSMUSG00000075960_U1	.	ENSMUSG00000075960	ProperStrand	210	1	-4.7807
chr10	25242391	25242498	protein_coding	Epb4.1l2	utr3	ENSMUSG00000019978	ProperStrand	105	chr14	63757836	63757887	protein_coding	Ctsb	exon	ENSMUSG00000021939	ProperStrand	48	1	-12.6390
chr4	43505767	43505857	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr11	75572890	75578155	protein_coding	Ywhae	exon	ENSMUSG00000020849	ProperStrand	176	1	-1.3238
chr18	58097090	58097114	protein_coding	Slc12a2	intron	ENSMUSG00000024597	ProperStrand	20	chr5	58219325	58219341	protein_coding	Pcdh7	intron	ENSMUSG00000029108	ProperStrand	8	1	-18.9291
chr1	181476147	181476163	protein_coding	Tfb2m	exon	ENSMUSG00000026492	ProperStrand	5	chr7	116663673	116663693	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-7.4047
chr8	125626609	125626787	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	chr14	45949538	45949554	protein_coding	Psmc6	exon	ENSMUSG00000021832	ProperStrand	326	1	-7.2322
chr19	22926639	22926662	protein_coding	Trpm3	intron	ENSMUSG00000052387	ProperStrand	54	chr16	23111383	23111455	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-5.9602
chr16	57391724	57391743	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	chr12	106269339	106269487	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	NonProperStrand	38	3	-20.7575
chr9	15119968	15120034	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	chr17	35089182	35089210	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	3	-1.9859
chr8	12867967	12868067	protein_coding	Atp11a	utr3	ENSMUSG00000031441	ProperStrand	635	chr18	80637717	80637759	protein_coding	Ctdp1	intron	ENSMUSG00000033323	ProperStrand	69	1	-8.3132
chr9	112088269	112088423	protein_coding-noncoding	Arpp21	utr3	ENSMUSG00000032503	ProperStrand	28	chr5	66651465	66651481	protein_coding	Nsun7	utr5	ENSMUSG00000029206	NonProperStrand	73	1	-14.4560
chr2	165637908	165637965	protein_coding	Zmynd8	exon	ENSMUSG00000039671	ProperStrand	81	chr8	70806307	70818293	protein_coding	Sh2d4a	exon	ENSMUSG00000053886	ProperStrand	1	1	-inf
chr1	16091824	16093628	protein_coding	Rpl7	exon	ENSMUSG00000043716	ProperStrand	93	chr16	23110854	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	7	-3.2787
chr4	86502149	86502249	protein_coding	Rps6	exon	ENSMUSG00000028495	ProperStrand	263	chr8	73419657	73419695	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-0.8520
chr17	35293844	35293944	protein_coding	Prrc2a	exon	ENSMUSG00000024393	ProperStrand	315	chr1	155287313	155287355	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	1	-5.6944
chr4	3762669	3762738	protein_coding	Rps20	utr5	ENSMUSG00000028234	ProperStrand	71	chr15	82980092	82980192	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-6.8049
chr7	13516149	13516196	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr17	24856620	24856664	snoRNA	ENSMUSG00000089255_Snora78	.	ENSMUSG00000089255	ProperStrand	1898	1	-2.1155
chr18	21054478	21054494	protein_coding	Trappc8	exon	ENSMUSG00000033382	ProperStrand	43	chr5	141377002	141377018	protein_coding	Card11	exon	ENSMUSG00000036526	ProperStrand	30	2	-inf
chr9	109973563	109973643	protein_coding	Mtap4	exon	ENSMUSG00000032479	ProperStrand	188	chr9	120037897	120037987	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	2	-4.5638
chr4	53873622	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	chr2	26493366	26493473	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-1.1316
chr4	118109342	118109369	protein_coding	Cdc20	exon	ENSMUSG00000006398	ProperStrand	43	chr10	39978337	39978427	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-6.1145
chr19	7095281	7095333	protein_coding	Stip1	utr3	ENSMUSG00000024966	ProperStrand	100	chr11	102294588	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	1	-7.8726
chr11	34689224	34689304	SINE	B4A	B4	chr11B4A34689071	ProperStrand	1	chr11	26030868	26030958	protein_coding	5730522E02Rik	intron	ENSMUSG00000032985	NonProperStrand	20	1	-inf
chr15	7117022	7119019	protein_coding	Lifr	exon	ENSMUSG00000054263	ProperStrand	64	chr7	52381719	52381756	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-7.4455
chr11	101160355	101160372	protein_coding	Becn1	exon	ENSMUSG00000035086	ProperStrand	8	chr1	162965531	162965587	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-7.2483
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr4	97812275	97812291	protein_coding	Nfia	intron	ENSMUSG00000028565	NonProperStrand	74	1	-7.3771
chr3	82816757	82816774	protein_coding	Fgg	exon	ENSMUSG00000033860	NonProperStrand	321	chr17	39985193	39985321	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-2.7781
chr2	28452422	28452502	LTR	MT2A	ERVL	chr2MT2A28452115	ProperStrand	1	chr15	85104737	85104827	protein_coding	Fbln1	intron	ENSMUSG00000006369	ProperStrand	32	1	-inf
chr19	5799986	5800056	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr14	69976482	69976513	protein_coding	Entpd4	intron	ENSMUSG00000022066	ProperStrand	17	4	-inf
chr4	131908405	131908485	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr11	60683386	60683476	protein_coding	Tmem11	intron	ENSMUSG00000043284	NonProperStrand	5	1	-12.4117
chrX	50605635	50605667	protein_coding	Fam122b	intron	ENSMUSG00000036022	ProperStrand	20	chr3	68889120	68889140	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-5.3533
chr4	131908452	131908482	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr5	117813700	117813716	protein_coding	Wsb2	exon	ENSMUSG00000029364	NonProperStrand	9	1	-11.1328
chr11	102294588	102294608	protein_coding	Grn	exon	ENSMUSG00000034708	NonProperStrand	546	chr1	33828651	33828669	protein_coding	Zfp451	intron	ENSMUSG00000042197	NonProperStrand	393	2	-8.5043
chr7	48982043	48982060	processed_transcript	Vmn2r-ps54	.	ENSMUSG00000074164	NonProperStrand	19	chr11	6428121	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.3857
chr4	86500722	86500782	protein_coding	Rps6	exon	ENSMUSG00000028495	ProperStrand	263	chr16	23111390	23111447	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-0.7116
chr9	88377174	88377264	protein_coding	Syncrip	utr5	ENSMUSG00000032423	ProperStrand	35	chr9	120038567	120038647	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-4.0343
chr9	63868722	63868738	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	chr9	15120932	15120981	snoRNA	ENSMUSG00000065265_SNORA32	.	ENSMUSG00000065265	ProperStrand	101	1	-7.5473
chr11	55296241	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	chr11	116938559	116938670	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	4	-2.3410
chr1	135153314	135153332	protein_coding	Plekha6	intron	ENSMUSG00000041757	ProperStrand	22	chr16	23110840	23110889	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.4786
chr11	120650676	120650757	protein_coding	Dus1l	utr3	ENSMUSG00000025155	ProperStrand	24	chr18	70632365	70632858	protein_coding	Stard6	utr5	ENSMUSG00000079608	ProperStrand	4	1	-inf
chr8	105560721	105560738	LINE	L1VL4	L1	chr8L1VL4105560332	NonProperStrand	17	chr10	23506324	23506347	snoRNA	ENSMUSG00000077440_SNORD101	.	ENSMUSG00000077440	ProperStrand	1457	1	-9.4921
chr7	19590197	19590213	protein_coding	Irf2bp1	exon	ENSMUSG00000044030	NonProperStrand	81	chr11	77996557	77996619	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	2	-9.0032
chr17	45705042	45705194	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr9	121823892	121823908	protein_coding	Cyp8b1	exon	ENSMUSG00000050445	NonProperStrand	101	1	-5.7043
chr2	179818901	179818942	protein_coding	Gtpbp5	exon	ENSMUSG00000039069	ProperStrand	4	chr9	120038567	120038671	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-8.5118
chr12	53100120	53100156	protein_coding	6530401N04Rik	utr3	ENSMUSG00000020956	ProperStrand	11	chr9	15119986	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-10.7037
chr9	99397785	99410280	protein_coding	Armc8	intron	ENSMUSG00000032468	ProperStrand	15	chr4	131908319	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-9.5441
chr6	86661635	86664220	protein_coding	Gmcl1	exon	ENSMUSG00000001157	ProperStrand	17	chr7	117189960	117190040	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-5.7589
chr19	37487806	37487832	protein_coding	Kif11	exon	ENSMUSG00000012443	ProperStrand	29	chr5	22938352	22938368	protein_coding	5031425E22Rik	utr3	ENSMUSG00000073147	ProperStrand	5	1	-inf
chr6	88555154	88555234	protein_coding	Kbtbd12	intron	ENSMUSG00000033182	ProperStrand	3	chr6	87105252	87105342	protein_coding	Antxr1	intron	ENSMUSG00000033420	ProperStrand	70	1	-20.0448
chr8	125626613	125626748	protein_coding	Rpl13	exon	ENSMUSG00000000740	ProperStrand	231	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-4.3013
chr17	24537514	24537741	protein_coding	Abca3	exon	ENSMUSG00000024130	ProperStrand	20	chr9	120038550	120038640	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-8.4791
chr13	52742638	52742718	protein_coding	Syk	utr3	ENSMUSG00000021457	ProperStrand	20	chr1	89681259	89681349	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-7.6298
chr15	81220083	81220119	protein_coding	St13	exon	ENSMUSG00000022403	ProperStrand	59	chr4	131865448	131865856	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-4.0339
chr1	137647647	137647737	protein_coding	Csrp1	utr3	ENSMUSG00000026421	ProperStrand	9	chr5	117833409	117833462	protein_coding	Rfc5	exon	ENSMUSG00000029363	ProperStrand	15	1	-19.5214
chr15	76690738	76690828	protein_coding	Zfp251	intron	ENSMUSG00000022526	ProperStrand	2	chr11	102138192	102138282	protein_coding	Asb16	intron	ENSMUSG00000034768	ProperStrand	2	1	-inf
chr9	110100217	110141737	protein_coding	Smarcc1	utr3	ENSMUSG00000032481	ProperStrand	108	chr2	26494714	26494842	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	4	-7.8790
chr6	28750434	28750464	protein_coding	Snd1	intron	ENSMUSG00000001424	ProperStrand	210	chr13	55589253	55589269	protein_coding	Dbn1	exon	ENSMUSG00000034675	ProperStrand	43	1	-11.4729
chr2	79843543	79843559	protein_coding	Pde1a	intron	ENSMUSG00000059173	NonProperStrand	275	chr15	82980101	82980188	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-4.1775
chr3	98132278	98132368	protein_coding-noncoding	Phgdh	utr3	ENSMUSG00000053398	NonProperStrand	1	chr3	98125266	98132047	protein_coding	Phgdh	exon	ENSMUSG00000053398	NonProperStrand	6	1	-inf
chr8	98280069	98280127	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	chr12	8223781	8223797	protein_coding	1110057K04Rik	intron	ENSMUSG00000037669	ProperStrand	25	1	-11.7610
chrX	84483703	84483731	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	chr1	153275456	153275473	protein_coding	1200016B10Rik	utr5	ENSMUSG00000052748	NonProperStrand	2	1	-15.7477
chr11	6428032	6428170	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr16	23110826	23111010	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	431	-0.9020
chr12	84983644	84985393	protein_coding	Rbm25	exon	ENSMUSG00000010608	ProperStrand	42	chr16	23110852	23110963	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-2.3773
chr11	108639400	108639422	protein_coding	Ccdc46	intron	ENSMUSG00000020728	ProperStrand	14	chr7	105310561	105310577	protein_coding	Capn5	exon	ENSMUSG00000035547	ProperStrand	99	1	-15.2686
chr12	86473768	86473858	protein_coding	Dlst	utr3	ENSMUSG00000004789	ProperStrand	52	chr10	90581042	90581122	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	6	-19.9150
chr2	90235314	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	14033226	14035965	protein_coding	Mllt4	exon	ENSMUSG00000068036	ProperStrand	156	1	-2.7092
chr6	82609849	82609881	protein_coding	Pole4	intron	ENSMUSG00000030042	ProperStrand	11	chr4	131865966	131865987	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.8470
chr1	73957004	73957096	protein_coding	Tns1	utr3	ENSMUSG00000055322	ProperStrand	63	chr4	131908685	131908722	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.1581
chr8	112833096	112836065	protein_coding	Hydin	exon	ENSMUSG00000059854	NonProperStrand	42	chr10	23505152	23505252	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	6	-11.6062
chr8	124932241	124934833	protein_coding	Zc3h18	exon	ENSMUSG00000017478	ProperStrand	55	chr13	96100602	96100692	snoRNA	ENSMUSG00000088108_Snora47	.	ENSMUSG00000088108	ProperStrand	827	1	-8.2423
chr16	21568106	21568122	protein_coding	Vps8	exon	ENSMUSG00000033653	NonProperStrand	14	chr11	77994808	77994864	snoRNA	ENSMUSG00000064540_Snord42a	.	ENSMUSG00000064540	ProperStrand	142	1	-14.5559
chr1	173341933	173341949	protein_coding	Usf1	utr5	ENSMUSG00000026641	NonProperStrand	144	chr5	151755616	151755632	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-6.0067
chr1	88423427	88423512	protein_coding	Ptma	utr5	ENSMUSG00000026238	ProperStrand	385	chr17	24665438	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	3	-4.6884
chr7	129133966	129135015	protein_coding	Gga2	exon	ENSMUSG00000030872	ProperStrand	65	chr4	131908814	131908894	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.1169
chr4	147454709	147455767	protein_coding	Agtrap	exon	ENSMUSG00000029007	ProperStrand	18	chr1	162968447	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-8.4949
chr5	119034828	119034851	protein_coding	Med13l	intron	ENSMUSG00000018076	ProperStrand	226	chr13	59739679	59739742	protein_coding	Golm1	exon	ENSMUSG00000021556	ProperStrand	27	1	-12.2690
chr19	53082307	53082324	protein_coding	Xpnpep1	intron	ENSMUSG00000025027	NonProperStrand	58	chr5	130300419	130300442	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-2.5677
chr2	151904043	151904133	SINE	B3	B2	chr2B3151904043	ProperStrand	1	chr2	152149693	152149773	protein_coding-noncoding	Rbck1	utr3	ENSMUSG00000027466	ProperStrand	3	1	-inf
chr16	6456240	6456257	Other	RMER1C	Other	chr16RMER1C6456169	ProperStrand	7	chr4	131908410	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-5.3201
chr9	108748138	108748249	protein_coding	Celsr3	exon	ENSMUSG00000023473	ProperStrand	31	chr16	41992906	41992922	protein_coding	Lsamp	intron	ENSMUSG00000061080	NonProperStrand	19	1	-16.9260
chr15	98350139	98350162	protein_coding	2310037I24Rik	intron	ENSMUSG00000022992	ProperStrand	91	chr10	23505541	23505627	protein_coding	Rps12	intron	ENSMUSG00000061983	ProperStrand	309	1	-9.1933
chr2	129998643	129998711	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr10	117274832	117274912	protein_coding	Rap1b	intron	ENSMUSG00000052681	ProperStrand	15	1	-10.9217
chr11	120148960	120148976	protein_coding	Bahcc1	exon	ENSMUSG00000039741	NonProperStrand	268	chr14	76247742	76247842	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-1.5817
chr11	116084070	116084087	protein_coding	Evpl	exon	ENSMUSG00000034282	ProperStrand	33	chr2	91436228	91436259	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	1	-8.6968
chr6	92326769	92326798	protein_coding	Prickle2	exon	ENSMUSG00000030020	ProperStrand	13	chr11	62416960	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	2	-14.5674
chr11	96680555	96680645	protein_coding	Nfe2l1	exon	ENSMUSG00000038615	ProperStrand	118	chr19	44188465	44188545	snoRNA	ENSMUSG00000077391_SNORA12	.	ENSMUSG00000077391	ProperStrand	506	1	-7.6941
chr12	17287865	17290085	protein_coding	Pdia6	exon	ENSMUSG00000020571	ProperStrand	114	chr17	39985147	39985227	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-4.6852
chr1	59539683	59539701	protein_coding	Fzd7	utr5	ENSMUSG00000041075	ProperStrand	373	chr19	8798740	8798758	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-1.5828
chr2	127124466	127124496	protein_coding	Stard7	utr3	ENSMUSG00000027367	ProperStrand	12	chr16	23111739	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	2	-8.1126
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr9	120038468	120038607	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	5	-0.7465
chr11	76217598	76217688	SINE	B3	B2	chr11B376217600	ProperStrand	1	chr11	76218006	76218096	SINE	B3	B2	chr11B376218019	ProperStrand	1	1	-inf
chr9	14366594	14366610	protein_coding	Amotl1	exon	ENSMUSG00000013076	ProperStrand	72	chr4	118967020	118967063	protein_coding	Ybx1	utr5	ENSMUSG00000028639	ProperStrand	171	1	-10.8450
chrX	11635848	11635865	protein_coding	Bcor	exon	ENSMUSG00000040363	NonProperStrand	293	chr5	143632530	143632568	protein_coding	Fbxl18	utr3	ENSMUSG00000066640	ProperStrand	64	1	-10.0052
chr2	147011593	147011610	protein_coding	Nkx2-2	exon	ENSMUSG00000027434	ProperStrand	47	chr16	23110852	23110963	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-3.1482
chr19	37282035	37282095	protein_coding	March5	utr5	ENSMUSG00000023307	ProperStrand	17	chr13	31936258	31936280	protein_coding	Gmds	intron	ENSMUSG00000038372	ProperStrand	27	3	-19.5377
chr9	57608766	57608791	protein_coding	Clk3	exon	ENSMUSG00000032316	NonProperStrand	15	chr2	158205275	158205405	snoRNA	ENSMUSG00000064585_SNORA71	.	ENSMUSG00000064585	NonProperStrand	3	1	-inf
chr7	52714460	52714503	protein_coding	Ftl1	exon	ENSMUSG00000050708	ProperStrand	807	chr12	80166682	80166712	protein_coding	Plekhh1	exon	ENSMUSG00000060716	ProperStrand	24	1	-9.9652
chr8	98397336	98397466	protein_coding	Got2	intron	ENSMUSG00000031672	ProperStrand	85	chr18	75161145	75161173	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	1	-8.3243
chr7	147996906	147996947	protein_coding	Zfp941	utr3	ENSMUSG00000060314	ProperStrand	2	chr1	162966000	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-10.9191
chr11	58762564	58762642	protein_coding	Hist3h2ba	exon	ENSMUSG00000056895	ProperStrand	10	chr1	162968255	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-10.4621
chr3	85945330	85945660	protein_coding	Rps3a	exon	ENSMUSG00000028081	ProperStrand	177	chr3	123210892	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	8	-9.1758
chr1	158215592	158215631	lincRNA	Tdrd5	exon	ENSMUSG00000060985	ProperStrand	7	chr17	35989484	35989510	protein_coding	Mdc1	exon	ENSMUSG00000061607	ProperStrand	85	1	-16.9784
chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	chr18	73693085	73693187	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	2	-3.6616
chr9	21823257	21823273	protein_coding	Elavl3	exon	ENSMUSG00000003410	NonProperStrand	137	chr5	108336363	108336406	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-3.3291
chr11	80965641	80965658	protein_coding	Accn1	exon	ENSMUSG00000020704	NonProperStrand	228	chr18	73693168	73693187	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-3.0117
chr11	6254987	6255080	protein_coding	Ogdh	exon	ENSMUSG00000020456	ProperStrand	42	chr9	34937149	34943969	protein_coding	Dcps	exon	ENSMUSG00000032040	ProperStrand	38	1	-14.9564
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	116038062	116071718	protein_coding	Gcn1l1	exon	ENSMUSG00000041638	ProperStrand	408	4	-5.2430
chr9	110644884	110644903	protein_coding	Pth1r	utr5	ENSMUSG00000032492	NonProperStrand	1	chr5	77738902	77738918	protein_coding	Noa1	exon	ENSMUSG00000036285	ProperStrand	147	1	-inf
chr8	109180748	109180826	protein_coding	Cdh1	exon	ENSMUSG00000000303	ProperStrand	283	chr11	69481342	69481432	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-0.8129
chr12	88488443	88496424	protein_coding	Pomt2	exon	ENSMUSG00000034126	NonProperStrand	331	chr14	52829460	52829570	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	2	-7.9918
chr9	15119968	15120035	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	chr2	166889037	166889056	snoRNA	ENSMUSG00000077515_SNORD12	.	ENSMUSG00000077515	ProperStrand	191	1	-4.9812
chr14	51427119	51427219	misc_RNA	AC027184.1	.	ENSMUSG00000092837	ProperStrand	1276	chr10	23505559	23505602	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	1	-1.8520
chr2	48760556	48760572	protein_coding	Orc4	utr3	ENSMUSG00000026761	ProperStrand	95	chr3	89034404	89034420	protein_coding	Muc1	exon	ENSMUSG00000042784	ProperStrand	4	1	-17.9620
chr1	173341933	173341949	protein_coding	Usf1	utr5	ENSMUSG00000026641	NonProperStrand	144	chr9	56943333	56943376	protein_coding	Sin3a	exon	ENSMUSG00000042557	ProperStrand	108	1	-10.3755
chr3	152064670	152083396	protein_coding	Zzz3	intron	ENSMUSG00000039068	ProperStrand	26	chr8	13876097	13876226	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	5	-19.0823
chr17	48017258	48017283	protein_coding	Foxp4	exon	ENSMUSG00000023991	ProperStrand	27	chr16	38158145	38158226	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	2	-16.1978
chr4	57455800	57455817	protein_coding	Palm2	intron	ENSMUSG00000090053	ProperStrand	17	chr1	89673512	89673565	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-5.6845
chr12	33638595	33638614	lincRNA	4933406C10Rik	exon	ENSMUSG00000086543	ProperStrand	52	chr16	23111451	23111505	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.4615
chr6	134492029	134516670	protein_coding	Lrp6	exon	ENSMUSG00000030201	ProperStrand	42	chr15	79913288	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.2623
chr5	151028071	151028140	protein_coding	Fry	intron	ENSMUSG00000056602	ProperStrand	24	chr1	89673641	89673731	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-5.0005
chr15	76541224	76541240	protein_coding	Lrrc14	utr5	ENSMUSG00000033728	ProperStrand	52	chrX	84483703	84483730	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-8.5357
chr2	90235293	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chrX	7408626	7408729	protein_coding	Kcnd1	exon	ENSMUSG00000009731	ProperStrand	19	2	-10.9135
chr7	6661048	6661127	protein_coding	Peg3	exon	ENSMUSG00000002265	ProperStrand	8	chr11	6519810	6519880	snoRNA	ENSMUSG00000064495_SNORA5	.	ENSMUSG00000064495	ProperStrand	881	1	-12.0733
chr7	82600670	82600686	protein_coding	Akap13	intron	ENSMUSG00000066406	ProperStrand	80	chr19	8963698	8964508	protein_coding	1810009A15Rik	exon	ENSMUSG00000071653	ProperStrand	5	1	-17.9059
chr7	139833256	139834171	protein_coding	Lhpp	exon	ENSMUSG00000030946	ProperStrand	35	chr15	102493377	102493450	protein_coding	Atp5g2	utr3	ENSMUSG00000062683	ProperStrand	32	1	-15.6832
chr10	67697065	67697082	protein_coding	Arid5b	intron	ENSMUSG00000019947	NonProperStrand	14	chr5	125511098	125511197	protein_coding	Ncor2	exon	ENSMUSG00000029478	ProperStrand	377	1	-12.5947
chrX	96085813	96085829	protein_coding	Ophn1	utr5	ENSMUSG00000031214	ProperStrand	3	chr13	101541067	101541088	protein_coding	Cenph	intron	ENSMUSG00000045273	NonProperStrand	45	1	-inf
chr12	88653766	88655006	protein_coding	Sptlc2	exon	ENSMUSG00000021036	ProperStrand	43	chr11	6428065	6428155	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-3.8060
chr8	83138737	83138753	protein_coding	Frem3	exon	ENSMUSG00000042353	NonProperStrand	53	chr3	68889150	68889202	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-3.4837
chr11	95435756	95439304	protein_coding	Ngfr	exon	ENSMUSG00000000120	ProperStrand	31	chr16	23110827	23110851	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0062
chr11	62416575	62416606	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr19	6011126	6011142	protein_coding	Capn1	exon	ENSMUSG00000024942	ProperStrand	22	1	-11.0014
chr10	40992088	40992106	protein_coding	Fig4	intron	ENSMUSG00000038417	ProperStrand	18	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-11.8112
chr5	100855940	100856013	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr11	6520337	6520427	snoRNA	ENSMUSG00000065686_Snora5c	.	ENSMUSG00000065686	ProperStrand	987	6	-10.3272
chr2	157109512	157116275	protein_coding	Rpn2	exon	ENSMUSG00000027642	ProperStrand	363	chr3	123210854	123210930	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	5	-1.7538
chr14	87957786	87957804	LTR	MTD	MaLR	chr14MTD87957714	NonProperStrand	1	chr8	13416895	13416912	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-inf
chr1	36284392	36287513	protein_coding	Uggt1	exon	ENSMUSG00000037470	ProperStrand	67	chr9	120038468	120038491	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.8429
chr3	96435365	96435422	protein_coding	Rbm8a	exon	ENSMUSG00000038374	ProperStrand	3	chr16	23110553	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-8.5395
chr5	115798630	115798647	protein_coding	Cox6a1	exon	ENSMUSG00000041697	NonProperStrand	8	chr7	117189933	117189973	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-7.3098
chr2	26493375	26493475	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	NonProperStrand	10	chr8	32260371	32260422	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	NonProperStrand	14	1	-inf
chr3	37750806	37750824	LINE	L1_Mus3	L1	chr3L1_Mus337750762	ProperStrand	38	chr10	60881085	60881167	protein_coding	Nodal	exon	ENSMUSG00000037171	ProperStrand	30	1	-15.6744
chr8	114390249	114390339	protein_coding	Tmem170	utr3	ENSMUSG00000031953	ProperStrand	16	chr7	116663683	116663763	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-4.9773
chr13	38079449	38079539	protein_coding	Ssr1	exon	ENSMUSG00000021427	ProperStrand	65	chr5	115939535	115939590	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-7.7055
chr13	8972405	8972480	protein_coding	Gtpbp4	exon	ENSMUSG00000021149	ProperStrand	26	chr1	162965545	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.8576
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr15	77356785	77356801	protein_coding	Apol7c	exon	ENSMUSG00000044309	ProperStrand	197	1	-6.2332
chrX	103398704	103398754	protein_coding	Pgk1	utr3	ENSMUSG00000062070	ProperStrand	484	chr11	55296251	55296279	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	2	-4.0695
chr9	56342952	56342981	protein_coding	Hmg20a	utr3	ENSMUSG00000032329	ProperStrand	87	chr7	116663715	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.8983
chr15	78173664	78173681	protein_coding	Csf2rb	intron	ENSMUSG00000071713	ProperStrand	16	chr5	108336374	108336428	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-7.5092
chr6	87793771	87793871	protein_coding	Cnbp	utr3	ENSMUSG00000030057	ProperStrand	46	chr2	58867551	58867568	protein_coding	Ccdc148	intron	ENSMUSG00000036641	ProperStrand	21	1	-15.9837
chr16	93939640	93939656	protein_coding	Cldn14	intron	ENSMUSG00000047109	ProperStrand	10	chr5	121655100	121655153	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-7.2897
chr13	46866727	46866879	protein_coding	Kif13a	exon	ENSMUSG00000021375	ProperStrand	466	chr9	59516394	59516414	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	1	-3.2414
chr6	64088282	64088301	protein_coding	Grid2	intron	ENSMUSG00000071424	NonProperStrand	76	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-1.4149
chr7	13516171	13516189	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr14	31867350	31867368	protein_coding	Pbrm1	exon	ENSMUSG00000042323	ProperStrand	87	1	-7.9237
chr7	71031631	71035730	protein_coding	Klf13	utr3	ENSMUSG00000052040	ProperStrand	28	chr16	23110855	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-3.6312
chr10	89474091	89474112	protein_coding	Anks1b	intron	ENSMUSG00000058589	ProperStrand	68	chr7	52382759	52382816	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-6.5040
chr6	122681521	122681583	protein_coding	Slc2a3	exon	ENSMUSG00000003153	ProperStrand	682	chr2	84530865	84531297	protein_coding	Zdhhc5	exon	ENSMUSG00000034075	NonProperStrand	144	1	-6.7098
chr14	58119380	58119397	protein_coding	Ift88	intron	ENSMUSG00000040040	NonProperStrand	2	chr7	51755799	51756344	protein_coding	Fam71e1	exon	ENSMUSG00000051113	NonProperStrand	135	1	-19.2741
chr17	88085704	88088282	protein_coding	Msh2	exon	ENSMUSG00000024151	ProperStrand	124	chr18	35716710	35716761	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-1.0901
chr13	45009100	45009171	protein_coding	Jarid2	exon	ENSMUSG00000038518	ProperStrand	372	chr3	85942714	85942773	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	1	-6.0933
chr19	56003755	56003771	protein_coding	Tcf7l2	intron	ENSMUSG00000024985	ProperStrand	103	chr8	90457093	90457158	protein_coding	Zfp423	intron	ENSMUSG00000045333	ProperStrand	33	1	-13.4353
chr3	138590165	138590185	protein_coding	Rap1gds1	utr3	ENSMUSG00000028149	ProperStrand	16	chr7	117189863	117189933	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	2	-14.1485
chr19	32748467	32748505	protein_coding	Atad1	utr3	ENSMUSG00000013662	ProperStrand	14	chr16	23111392	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-6.3756
chr3	88117291	88117513	protein_coding	Cct3	exon	ENSMUSG00000001416	ProperStrand	82	chr11	98878351	98878441	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-5.6706
chr6	124691240	124691284	protein_coding	Grcc10	utr5	ENSMUSG00000072772	ProperStrand	88	chr18	35714249	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	3	-7.1363
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr2	37278343	37278359	protein_coding	Rc3h2	utr5	ENSMUSG00000075376	NonProperStrand	4	1	-13.4632
chr7	4383489	4383579	protein_coding	Rdh13	intron	ENSMUSG00000008435	NonProperStrand	1	chr13	59147011	59147091	protein_coding	Ntrk2	intron	ENSMUSG00000055254	ProperStrand	22	1	-inf
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr6	125236041	125236057	protein_coding	Tuba3a	utr5	ENSMUSG00000067702	ProperStrand	405	3	-11.6468
chr8	97626676	97627394	protein_coding	Kifc3	exon	ENSMUSG00000031788	ProperStrand	13	chr1	162966009	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-6.5934
chr1	88253133	88253223	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chr17	26360447	26360527	snoRNA	ENSMUSG00000088273_SNORA48	.	ENSMUSG00000088273	ProperStrand	309	1	-4.1654
chr15	76262607	76262810	protein_coding	Heatr7a	exon	ENSMUSG00000022558	ProperStrand	48	chr17	32453268	32453285	protein_coding	Akap8	exon	ENSMUSG00000024045	ProperStrand	339	3	-inf
chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	chr19	8799021	8799052	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-1.5848
chr2	153050783	153050799	protein_coding	Tspyl3	exon	ENSMUSG00000074671	ProperStrand	228	chr7	148634701	148634762	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-1.6753
chr7	73547011	73550865	protein_coding	Aldh1a3	exon	ENSMUSG00000015134	NonProperStrand	4	chr1	162965980	162965996	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-9.1328
chr4	153334875	153334892	protein_coding	A430005L14Rik	exon	ENSMUSG00000047613	ProperStrand	2	chrX	34622933	34623023	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-10.4435
chr5	54509841	54509857	protein_coding	Stim2	exon	ENSMUSG00000039156	NonProperStrand	22	chr12	17552949	17553044	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-7.0768
chr11	42440243	42440259	protein_coding	Gabrb2	exon	ENSMUSG00000007653	ProperStrand	248	chr9	119058760	119058804	protein_coding	Acaa1b	exon	ENSMUSG00000010651	ProperStrand	2	1	-18.0988
chr4	117909002	117909018	protein_coding	Ptprf	exon	ENSMUSG00000033295	ProperStrand	337	chr6	125136435	125136535	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	2	-5.4059
chr2	167434660	167435806	protein_coding	Gm20431	exon	ENSMUSG00000089739	ProperStrand	81	chr3	68889052	68889132	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-2.7223
chr8	18885410	18885450	protein_coding	Agpat5	utr3	ENSMUSG00000031467	ProperStrand	7	chr7	116663712	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-11.0058
chr4	80557376	80557393	protein_coding	D4Bwg0951e	exon	ENSMUSG00000048706	NonProperStrand	1	chr18	35716764	35716877	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-inf
chr10	122002950	122003030	LINE	L1Md_F2	L1	chr10L1Md_F2122002095	ProperStrand	17	chr13	119841096	119841186	LINE	L1Md_F2	L1	chr13L1Md_F2119840698	ProperStrand	1	1	-inf
chr2	90235294	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	107673007	107673024	protein_coding	Rbm5	intron	ENSMUSG00000032580	NonProperStrand	38	1	-5.3470
chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	chr3	8541931	8545618	protein_coding	Stmn2	exon	ENSMUSG00000027500	ProperStrand	16	1	-11.1855
chr13	53285957	53285977	protein_coding	Ror2	intron	ENSMUSG00000021464	ProperStrand	46	chr9	108594652	108594669	protein_coding	Prkar2a	utr5	ENSMUSG00000032601	ProperStrand	43	1	-14.5263
chr17	4082162	4082381	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr16	23111374	23111476	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	11	-4.4455
chr8	23671644	23671704	protein_coding	Slc20a2	exon	ENSMUSG00000037656	ProperStrand	63	chr11	97489600	97489617	protein_coding	E130012A19Rik	exon	ENSMUSG00000043439	NonProperStrand	110	1	-11.9983
chr11	116535915	116535982	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	chr8	47661925	47662025	protein_coding	Ccdc111	utr3	ENSMUSG00000038225	ProperStrand	7	1	-10.3003
chr11	95147709	95151088	protein_coding	Myst2	exon	ENSMUSG00000038909	ProperStrand	56	chr1	162966827	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	5	-20.2450
chr17	46861595	46861611	protein_coding	Pex6	exon	ENSMUSG00000002763	ProperStrand	292	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	3	-2.7564
chr11	98566094	98566146	protein_coding	Med24	utr3	ENSMUSG00000017210	ProperStrand	28	chr18	63109676	63109692	protein_coding	Apcdd1	exon	ENSMUSG00000071847	NonProperStrand	254	1	-11.9608
chr11	74663788	74663843	protein_coding	Sgsm2	utr3	ENSMUSG00000038351	ProperStrand	60	chr7	116664857	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	3	-6.7160
chr7	108440949	108440967	protein_coding	Atg16l2	intron	ENSMUSG00000047767	ProperStrand	121	chr1	176764802	176764818	protein_coding	Grem2	utr3	ENSMUSG00000050069	ProperStrand	24	1	-13.7584
chr9	56266647	56266665	protein_coding	Hmg20a	utr5	ENSMUSG00000032329	ProperStrand	87	chr4	131908416	131908443	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-0.9254
chr2	38859670	38860254	protein_coding	Rpl35	exon	ENSMUSG00000062997	ProperStrand	68	chr7	116664809	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	4	-8.5809
chr5	145586161	145614939	protein_coding	Trrap	exon	ENSMUSG00000045482	ProperStrand	399	chr11	97642952	97643092	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	13	-11.9731
chr16	87570603	87581389	protein_coding	ORF63	exon	ENSMUSG00000025610	NonProperStrand	23	chr11	106362348	106362379	snoRNA	ENSMUSG00000065126_Snord104	.	ENSMUSG00000065126	ProperStrand	2559	1	-7.7555
chr6	85388876	85389659	protein_coding	Smyd5	exon	ENSMUSG00000033706	ProperStrand	107	chr9	15130769	15130799	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	1	-8.0565
chr7	19688701	19688720	protein_coding-noncoding	Gm4969	utr3	ENSMUSG00000085601	NonProperStrand	1	chr11	6428108	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-inf
chr3	153574587	153574655	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	chr7	52381973	52382010	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-3.2358
chr10	122002348	122002438	LINE	L1Md_F2	L1	chr10L1Md_F2122002095	ProperStrand	17	chr1	113895053	113895133	LINE	L1Md_F3	L1	chr1L1Md_F3113894534	ProperStrand	1	1	-inf
chr2	152220592	152220692	protein_coding	Sox12	utr3	ENSMUSG00000051817	ProperStrand	31	chr17	24665420	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-6.2372
chr1	137202769	137205733	protein_coding	Timm17a	exon	ENSMUSG00000062580	ProperStrand	6	chr10	110918674	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-13.1372
chr5	136585059	136585102	protein_coding	Rasa4	intron	ENSMUSG00000004952	ProperStrand	2	chr16	23110959	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr4	107151292	107241096	protein_coding	Glis1	exon	ENSMUSG00000034762	ProperStrand	14	2	-11.8833
chr4	155338981	155339162	protein_coding	Fam132a	exon	ENSMUSG00000023571	ProperStrand	20	chr8	129468799	129468879	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	19	-19.6979
chr19	45009886	45009931	protein_coding	Fam178a	exon	ENSMUSG00000036097	ProperStrand	29	chr10	110918549	110918639	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-4.8269
chr7	26535969	26539405	protein_coding	Hnrnpul1	exon	ENSMUSG00000040725	ProperStrand	84	chr2	18508668	18508716	tRNA	tRNA1947-AsnGTT	.	138439	ProperStrand	179	1	-10.4442
chr13	95856366	95856384	protein_coding	Pde8b	intron	ENSMUSG00000021684	ProperStrand	43	chr1	162965530	162965562	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.8927
chr11	74657274	74657336	protein_coding	Mnt	utr3	ENSMUSG00000000282	ProperStrand	56	chr4	131908351	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.5191
chr7	138054605	138054705	protein_coding	Plekha1	utr3	ENSMUSG00000040268	ProperStrand	15	chr1	162967528	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-6.1639
chr11	62151057	62151089	protein_coding	Ncor1	exon	ENSMUSG00000018501	ProperStrand	132	chr3	126547274	126547291	protein_coding	Camk2d	utr3	ENSMUSG00000053819	NonProperStrand	20	1	-13.9552
chr6	65840944	65840988	protein_coding	Prdm5	intron	ENSMUSG00000029913	ProperStrand	50	chr5	108334253	108334328	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-5.1733
chr5	121897246	121902377	protein_coding	Erp29	exon	ENSMUSG00000029616	ProperStrand	33	chr16	23110861	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-4.5464
chr13	23636708	23636799	protein_coding	Hist1h3f	utr3	ENSMUSG00000059309	ProperStrand	26	chr11	106362568	106362635	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-9.0860
chr11	119928340	119928489	protein_coding	Azi1	exon	ENSMUSG00000039781	ProperStrand	24	chr8	32260335	32260413	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	5	-19.3844
chr9	15130811	15130888	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	chr17	24665440	24665495	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	5	-7.5946
chr17	74822399	74822462	protein_coding	Slc30a6	exon	ENSMUSG00000024069	ProperStrand	4	chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	2	-19.6791
chr14	35165257	35166893	protein_coding	Fam25c	exon	ENSMUSG00000043681	NonProperStrand	29	chr1	162967548	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.8538
chr16	57134575	57134613	protein_coding	Tomm70a	intron	ENSMUSG00000022752	ProperStrand	82	chr16	23111449	23111494	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.8604
chr3	54551982	54552000	protein_coding	Alg5	intron	ENSMUSG00000036632	ProperStrand	2	chr11	55296262	55296331	snoRNA	ENSMUSG00000065061_SNORA29	.	ENSMUSG00000065061	ProperStrand	2153	1	-13.6189
chr12	104655666	104655766	protein_coding	Ddx24	exon	ENSMUSG00000041645	ProperStrand	34	chr3	153574607	153574651	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	4	-19.0449
chr3	142446197	142446258	protein_coding	Gtf2b	exon	ENSMUSG00000028271	ProperStrand	5	chr4	21737941	21737963	protein_coding	Usp45	exon	ENSMUSG00000040455	ProperStrand	40	1	-19.0790
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr13	68759738	68764669	protein_coding	Adcy2	exon	ENSMUSG00000021536	ProperStrand	237	2	-8.3695
chr2	27390963	27391053	protein_coding	Wdr5	utr3	ENSMUSG00000026917	ProperStrand	81	chr15	82980099	82980189	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-6.5441
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	21602970	21602986	protein_coding	Kank2	utr5	ENSMUSG00000032194	ProperStrand	196	1	-2.3203
chr11	84722945	84722961	protein_coding	Myo19	exon	ENSMUSG00000020527	ProperStrand	82	chrX	7752870	7752886	protein_coding	Tbc1d25	exon	ENSMUSG00000039201	ProperStrand	126	1	-11.1956
chr10	5990109	6063978	protein_coding	Akap12	utr3	ENSMUSG00000038587	ProperStrand	1008	chr12	106269284	106269429	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	5	-2.2384
chr16	46496243	46496333	protein_coding	Pvrl3	intron	ENSMUSG00000022656	ProperStrand	11	chr16	23110911	23110991	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.6241
chr4	79706633	79706723	LINE	Lx4A	L1	chr4Lx4A79706493	NonProperStrand	1	chr4	79706349	79706439	SINE	B4	B4	chr4B479706355	NonProperStrand	1	1	-inf
chr1	38102636	38102682	protein_coding	Eif5b	intron	ENSMUSG00000026083	ProperStrand	118	chr2	144097020	144097037	protein_coding	8430406I07Rik	utr5	ENSMUSG00000027424	ProperStrand	43	1	-12.6282
chr2	90235286	90235337	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr5	64792049	64792070	LTR	MLT1H	MaLR	chr5MLT1H64791748	NonProperStrand	30	1	-5.8128
chr10	75322601	75322835	protein_coding	Mif	exon	ENSMUSG00000033307	ProperStrand	146	chr1	162966001	162966042	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-2.0501
chrX	99445995	99446012	protein_coding	Cited1	utr5	ENSMUSG00000051159	ProperStrand	72	chr11	62416575	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	3	-11.4050
chr18	78016408	78017263	protein_coding	Atp5a1	exon	ENSMUSG00000025428	ProperStrand	254	chr2	26493410	26493466	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-1.3275
chr11	80732380	80732400	protein_coding	Accn1	intron	ENSMUSG00000020704	NonProperStrand	228	chr1	24621171	24621236	protein_coding	Gm10925	utr3	ENSMUSG00000090378	NonProperStrand	70	1	-10.3264
chr6	108816236	108816316	LTR	ORR1A2	MaLR	chr6ORR1A2108816171	ProperStrand	1	chr6	108816047	108816137	SINE	ID_B1	B4	chr6ID_B1108816061	NonProperStrand	1	1	-inf
chr4	131908687	131908901	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	chr11	69482367	69482447	snoRNA	ENSMUSG00000089542_snoU6-77	.	ENSMUSG00000089542	ProperStrand	138	3	-1.4342
chr11	101431047	101431064	protein_coding	Nbr1	exon	ENSMUSG00000017119	ProperStrand	91	chr10	44878154	44878205	protein_coding	Prep	exon	ENSMUSG00000019849	ProperStrand	21	1	-14.6001
chr4	122970425	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	chr1	9932550	9932597	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-2.1630
chr14	64344966	64345046	protein_coding	Xkr6	intron	ENSMUSG00000035067	ProperStrand	10	chr14	78194873	78194963	protein_coding	Gm1587	intron	ENSMUSG00000075512	NonProperStrand	1	1	-inf
chr17	24342579	24343602	protein_coding	Ntn3	utr3	ENSMUSG00000079662	ProperStrand	237	chr2	26494708	26494842	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	5	-6.0477
chr9	120038561	120038651	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	chr1	89681326	89681396	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	NonProperStrand	11	1	-6.3233
chr7	26499390	26499480	protein_coding	Ccdc97	exon	ENSMUSG00000002608	ProperStrand	10	chr18	35100500	35100580	protein_coding	Hspa9	exon	ENSMUSG00000024359	ProperStrand	166	1	-14.9407
chr2	113977259	113980740	protein_coding	Aqr	exon	ENSMUSG00000040383	ProperStrand	70	chr10	9571816	9571891	snoRNA	ENSMUSG00000064609_SNORA36	.	ENSMUSG00000064609	ProperStrand	35	1	-14.0979
chr18	34928540	34928557	protein_coding	Fam53c	exon	ENSMUSG00000034300	ProperStrand	72	chr14	31827478	31827516	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-6.5832
chr7	53232011	53232065	protein_coding	Abcc6	utr3	ENSMUSG00000030834	NonProperStrand	5	chr14	76956323	76956339	protein_coding	Serp2	utr5	ENSMUSG00000052584	NonProperStrand	41	1	-19.0663
chr4	3762434	3762669	protein_coding	Rps20	utr5	ENSMUSG00000028234	ProperStrand	71	chr15	76443675	76443767	protein_coding	Slc39a4	exon	ENSMUSG00000063354	ProperStrand	35	2	-inf
chr9	114293944	114295368	protein_coding	Crtap	exon	ENSMUSG00000032431	ProperStrand	15	chr11	97642975	97643055	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-5.0602
chr6	88511383	88511399	protein_coding	Kbtbd12	intron	ENSMUSG00000033182	NonProperStrand	2	chr15	80840898	80840937	protein_coding	Sgsm3	exon	ENSMUSG00000042303	ProperStrand	11	1	-21.3789
chr14	34780932	34780996	protein_coding	Zfp488	utr3	ENSMUSG00000044519	ProperStrand	54	chr1	89681191	89681281	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	1	-5.6471
chr11	97034414	97034504	protein_coding	Kpnb1	exon	ENSMUSG00000001440	ProperStrand	197	chr7	116664812	116664892	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-0.8029
chr3	55273892	55273982	protein_coding	Dclk1	utr3	ENSMUSG00000027797	ProperStrand	6	chr8	19977666	19977746	pseudogene	2610005L07Rik	.	ENSMUSG00000071793	ProperStrand	40	1	-18.4531
chr4	131908380	131908454	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr15	5068441	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-0.8495
chr11	119136228	119136244	protein_coding	Gaa	exon	ENSMUSG00000025579	NonProperStrand	201	chr4	131865855	131865932	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-1.4264
chrX	162151216	162151238	LINE	L2a	L2	chrXL2a162151076	NonProperStrand	4	chr6	115757998	115758120	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	4	-inf
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr4	141587965	141593375	protein_coding	Tmem51	exon	ENSMUSG00000040616	ProperStrand	30	1	-9.9899
chr1	160133128	160133158	SINE	ID_B1	B4	chr1ID_B1160133110	ProperStrand	2	chr11	116535483	116535534	protein_coding	1810032O08Rik	utr3	ENSMUSG00000020812	ProperStrand	2471	2	-inf
chr15	35932774	35932864	LTR	MTE2b	MaLR	chr15MTE2b35932652	ProperStrand	1	chr7	116663698	116663764	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-inf
chr14	76247707	76247763	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	NonProperStrand	16	chr10	110918546	110918646	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	NonProperStrand	10	4	-21.6614
chr17	26019669	26019702	protein_coding	Rab40c	utr3	ENSMUSG00000025730	ProperStrand	5	chr11	69483136	69483188	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-7.3324
chr8	127407452	127407468	protein_coding	Gnpat	exon	ENSMUSG00000031985	NonProperStrand	13	chr1	120505688	120505721	protein_coding	Clasp1	utr3	ENSMUSG00000064302	ProperStrand	23	1	-18.0253
chr6	71838568	71838591	protein_coding	Ptcd3	exon	ENSMUSG00000063884	ProperStrand	34	chr8	46439259	46439275	protein_coding	Fam149a	exon	ENSMUSG00000070044	ProperStrand	57	1	-14.5512
chr16	87486724	87486745	protein_coding	Cct8	exon	ENSMUSG00000025613	ProperStrand	65	chr18	35716701	35716763	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.0388
chr4	74701191	74701210	LTR	ORR1B1	MaLR	chr4ORR1B174701119	NonProperStrand	1	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr12	100427699	100427779	LTR	RLTR20D	ERVK	chr12RLTR20D100427622	NonProperStrand	1	chr12	100427416	100427506	SINE	B4A	B4	chr12B4A100427290	NonProperStrand	1	1	-inf
chr1	185857228	185857244	protein_coding	1700056E22Rik	exon	ENSMUSG00000044854	ProperStrand	173	chr8	73419654	73419712	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	1	-1.3952
chr3	104600039	104600281	protein_coding	Mov10	exon	ENSMUSG00000002227	ProperStrand	96	chr5	142459851	142459869	protein_coding	Sdk1	intron	ENSMUSG00000039683	ProperStrand	230	6	-18.9572
chr17	29018077	29018093	protein_coding	Pnpla1	exon	ENSMUSG00000043286	NonProperStrand	22	chr16	23110962	23111005	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.4786
chr2	118611946	118611962	protein_coding	Disp2	exon	ENSMUSG00000040035	NonProperStrand	204	chr1	162965531	162965554	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.2781
chr11	86570217	86570307	protein_coding	Cltc	intron	ENSMUSG00000047126	ProperStrand	319	chr15	79913293	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-0.9248
chr8	73419657	73419757	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	chr8	113362430	113362456	snoRNA	ENSMUSG00000080396_Snord111	.	ENSMUSG00000080396	ProperStrand	453	2	-0.7831
chrX	132336186	132336286	protein_coding	Gprasp1	exon	ENSMUSG00000043384	ProperStrand	57	chr16	38158194	38158226	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	1	-8.7531
chr19	6376594	6376629	protein_coding	Sf1	utr3	ENSMUSG00000024949	ProperStrand	251	chr19	8963111	8963179	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	2	-0.9248
chr18	41356150	41356185	miRNA	Mir5097	dead	ENSMUSG00000093361	ProperStrand	221	chr9	122926384	122926484	protein_coding	Kif15	exon	ENSMUSG00000036768	ProperStrand	46	1	-11.2344
chr16	18873768	18875486	protein_coding	Mrpl40	exon	ENSMUSG00000022706	ProperStrand	2	chr16	23110829	23110909	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr11	58768256	58768356	protein_coding	Hist3h2a	exon	ENSMUSG00000078851	ProperStrand	67	chr16	23111438	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.1109
chr15	38008367	38008385	protein_coding	Ubr5	utr5	ENSMUSG00000037487	ProperStrand	258	chr2	153050783	153050799	protein_coding	Tspyl3	exon	ENSMUSG00000074671	ProperStrand	228	1	-7.7215
chrX	148553686	148553766	LINE	Lx9	L1	chrXLx9148553389	NonProperStrand	1	chr16	12184935	12185025	protein_coding	Shisa9	intron	ENSMUSG00000022494	ProperStrand	10	1	-inf
chrX	133268563	133268629	protein_coding	Morf4l2	exon	ENSMUSG00000031422	ProperStrand	113	chr15	34370588	34370678	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-2.4253
chr15	76536651	76536710	protein_coding	Recql4	exon	ENSMUSG00000033762	ProperStrand	18	chr5	130300470	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.7422
chr15	25726959	25726975	protein_coding	Myo10	exon	ENSMUSG00000022272	ProperStrand	168	chr11	62416951	62417015	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-4.0574
chr11	120824873	120824890	protein_coding	Csnk1d	utr3	ENSMUSG00000025162	NonProperStrand	10	chr3	108357255	108357355	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-8.1266
chr7	52381319	52381356	protein_coding	Rpl13a	exon	ENSMUSG00000074129	ProperStrand	269	chr18	35714188	35714288	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-1.0343
chr3	89865836	89865875	protein_coding	4933434E20Rik	utr3	ENSMUSG00000027942	ProperStrand	19	chr2	121881209	121881434	protein_coding	Spg11	exon	ENSMUSG00000033396	ProperStrand	32	5	-19.9885
chr13	75901186	75901286	protein_coding	Ell2	exon	ENSMUSG00000001542	ProperStrand	110	chrX	34622906	34622927	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-2.1245
chr1	133252344	133252403	protein_coding	Srgap2	intron	ENSMUSG00000026425	ProperStrand	299	chr6	55451369	55451395	protein_coding	Adcyap1r1	utr3	ENSMUSG00000029778	ProperStrand	3	1	-16.4681
chr17	19519575	19530627	protein_coding	Vmn2r99	exon	ENSMUSG00000090304	ProperStrand	10	chr9	15119287	15119392	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	2	-13.9914
chr11	97545349	97545380	protein_coding	Mllt6	utr3	ENSMUSG00000038437	ProperStrand	110	chr5	121655016	121655105	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.6553
chr2	90235286	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	89624893	89624909	protein_coding	Txnrd3	utr3	ENSMUSG00000000811	ProperStrand	18	1	-6.8363
chr14	76926611	76926627	LINE	L1MB3	L1	chr14L1MB376926376	ProperStrand	61	chr5	111121153	111121202	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	1	-6.4017
chr2	24825186	24827046	protein_coding	Wdr85	exon	ENSMUSG00000026975	ProperStrand	323	chr9	15119967	15120013	snoRNA	ENSMUSG00000064797_snoZ40	.	ENSMUSG00000064797	ProperStrand	1248	1	-3.9838
chrX	132649793	132649811	lincRNA	5730412P04Rik	exon	ENSMUSG00000087553	ProperStrand	1	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-inf
chr7	135273894	135274342	protein_coding	Itgax	exon	ENSMUSG00000030789	ProperStrand	2	chr3	123210882	123210972	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-9.1566
chr8	126186542	126186559	protein_coding	Rhou	utr3	ENSMUSG00000039960	NonProperStrand	3	chr18	75160711	75160774	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	1	-15.5554
chr9	108465794	108465937	protein_coding	Impdh2	exon	ENSMUSG00000062867	ProperStrand	74	chr3	123210890	123210980	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.7343
chr2	11602046	11603567	protein_coding	Il2ra	exon	ENSMUSG00000026770	ProperStrand	17	chr18	35403773	35404378	protein_coding	Ctnna1	exon	ENSMUSG00000037815	ProperStrand	115	1	-14.5759
chr6	72792607	72792692	protein_coding	Kcmf1	utr3	ENSMUSG00000055239	ProperStrand	26	chr16	23111448	23111500	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.5788
chr19	13388626	13388644	protein_coding	Olfr1465	exon	ENSMUSG00000062199	NonProperStrand	1	chr16	23110839	23110883	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr17	9142526	9142543	protein_coding	Pde10a	intron	ENSMUSG00000023868	NonProperStrand	78	chr2	42028705	42028723	protein_coding	Lrp1b	intron	ENSMUSG00000049252	NonProperStrand	39	1	-13.6553
chr1	174202336	174202352	protein_coding	Atp1a2	utr3	ENSMUSG00000007097	ProperStrand	12	chr1	89673574	89673664	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-6.3904
chr10	60692417	60692433	protein_coding	Adamts14	exon	ENSMUSG00000059901	NonProperStrand	127	chr17	24857800	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-1.1595
chr4	86500713	86502693	protein_coding	Rps6	exon	ENSMUSG00000028495	ProperStrand	263	chr18	35716707	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-1.3876
chr11	95275678	95331885	protein_coding	Spop	utr5	ENSMUSG00000057522	ProperStrand	22	chr19	8800361	8800441	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-5.4555
chr17	35198784	35198838	protein_coding	Ddah2	exon	ENSMUSG00000007039	ProperStrand	23	chr16	23110543	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	4	-13.7753
chr7	149170854	149171339	protein_coding	Brsk2	exon	ENSMUSG00000053046	NonProperStrand	168	chr5	121655016	121655106	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-1.9505
chr7	149561920	149561997	protein_coding	Ctsd	utr3	ENSMUSG00000007891	ProperStrand	60	chr9	64024535	64024566	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	1	-8.3655
chr9	54216959	54216991	protein_coding-noncoding	Dmxl2	utr3	ENSMUSG00000041268	ProperStrand	2	chr9	54217045	54217065	protein_coding	Dmxl2	exon	ENSMUSG00000041268	ProperStrand	18	2	-inf
chr10	79174540	79174633	protein_coding	Bsg	utr3	ENSMUSG00000023175	ProperStrand	107	chr5	150433377	150433403	protein_coding	Hsph1	exon	ENSMUSG00000029657	ProperStrand	16	1	-14.8393
chr9	15800370	15800387	protein_coding	Fat3	exon	ENSMUSG00000074505	ProperStrand	14	chr4	131865867	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-4.3681
chr1	34247773	34247812	protein_coding	Dst	utr5	ENSMUSG00000026131	ProperStrand	461	chr2	130101266	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	2	-4.7561
chr3	157402722	157402812	LINE	L1MA9	L1	chr3L1MA9157402697	ProperStrand	1	chr5	36463776	36463856	protein_coding	Sorcs2	intron	ENSMUSG00000029093	ProperStrand	21	1	-inf
chr15	31522059	31522127	protein_coding	Cct5	exon	ENSMUSG00000022234	ProperStrand	116	chr9	120038554	120038644	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	3	-5.3238
chr11	35853255	35853271	protein_coding	Odz2	exon	ENSMUSG00000049336	ProperStrand	106	chr5	136386421	136386472	protein_coding	Ywhag	utr3	ENSMUSG00000051391	ProperStrand	142	1	-10.4411
chr9	69220985	69221002	protein_coding	Rora	exon	ENSMUSG00000032238	ProperStrand	25	chr4	131865930	131865986	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.2649
chr17	24857961	24858048	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	chr11	83107867	83107903	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	1	-5.2271
chr14	21507730	21508034	protein_coding	Sec24c	exon	ENSMUSG00000039367	ProperStrand	60	chr12	112779242	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-4.7759
chr7	118190074	118190323	protein_coding	Ctr9	exon	ENSMUSG00000005609	ProperStrand	21	chr8	73419690	73419770	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-8.4787
chr7	106646236	106646280	rRNA	n-R5s156	.	ENSMUSG00000065311	ProperStrand	8	chr12	112779213	112779284	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	2	-14.2240
chr5	137465051	137465475	protein_coding	Plod3	exon	ENSMUSG00000004846	NonProperStrand	8	chr2	32076681	32076921	protein_coding	Prrc2b	exon	ENSMUSG00000039262	ProperStrand	344	2	-19.1013
chr11	72257563	72257580	protein_coding	Mybbp1a	exon	ENSMUSG00000040463	ProperStrand	279	chr11	77996558	77996625	snoRNA	ENSMUSG00000065676_Snord42b	.	ENSMUSG00000065676	ProperStrand	2252	1	-3.1710
chr7	109295852	109300892	protein_coding	Nup98	exon	ENSMUSG00000063550	ProperStrand	100	chr16	23110529	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.6379
chr13	96284192	96295006	protein_coding	F2rl1	exon	ENSMUSG00000021678	ProperStrand	28	chr2	158182154	158182210	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	2	-10.5488
chr2	130245377	130245394	protein_coding	Fam113a	exon	ENSMUSG00000037773	ProperStrand	1	chr9	56973181	56975052	protein_coding	Sin3a	exon	ENSMUSG00000042557	ProperStrand	108	1	-inf
chr11	109086896	109086914	protein_coding	Rgs9	utr3	ENSMUSG00000020599	NonProperStrand	18	chr1	72895847	72896151	protein_coding	Igfbp2	exon	ENSMUSG00000039323	ProperStrand	406	1	-11.9258
chr11	19963458	19963520	protein_coding	Actr2	utr3	ENSMUSG00000020152	ProperStrand	72	chr17	25270491	25270507	protein_coding	Clcn7	exon	ENSMUSG00000036636	ProperStrand	94	1	-12.0440
chr17	32339161	32339224	protein_coding	Brd4	exon	ENSMUSG00000024002	ProperStrand	121	chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	1	-5.5437
chr5	109063677	109063694	protein_coding	Tmem175	intron	ENSMUSG00000013495	ProperStrand	31	chr7	116663694	116663766	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.7004
chr11	98072220	98072347	protein_coding	Cdk12	exon	ENSMUSG00000003119	ProperStrand	50	chr8	129468862	129468879	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-4.7636
chr11	113005356	113005373	lincRNA	2610035D17Rik	intron	ENSMUSG00000087259	NonProperStrand	38	chr10	23505152	23505281	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-1.9123
chr3	16382664	16382754	LTR	RLTR13D6	ERVK	chr3RLTR13D616382524	NonProperStrand	1	chr1	8548148	8548238	protein_coding	Sntg1	intron	ENSMUSG00000025909	ProperStrand	8	1	-inf
chr2	172805565	172805582	protein_coding	Spo11	intron	ENSMUSG00000005883	NonProperStrand	7	chr5	107083955	107083974	protein_coding	Zfp644	intron	ENSMUSG00000049606	ProperStrand	35	1	-18.9384
chr2	118256810	118256828	protein_coding	Eif2ak4	exon	ENSMUSG00000005102	NonProperStrand	4	chr5	150025157	150025173	protein_coding	Uspl1	exon	ENSMUSG00000041264	NonProperStrand	33	1	-19.0852
chr16	11199755	11199786	protein_coding	Rsl1d1	exon	ENSMUSG00000005846	ProperStrand	65	chr6	72180855	72180872	protein_coding	Atoh8	intron	ENSMUSG00000037621	NonProperStrand	61	1	-13.1191
chr10	127681318	127681558	protein_coding	Timeless	exon	ENSMUSG00000039994	ProperStrand	53	chr19	8800375	8800455	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-3.7600
chr11	98010664	98010681	protein_coding	Fbxl20	utr5	ENSMUSG00000020883	ProperStrand	23	chr9	78327846	78327889	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-8.2545
chr9	39882020	39882036	protein_coding	Olfr982	exon	ENSMUSG00000049010	NonProperStrand	35	chr5	121655031	121655097	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-4.7731
chr19	4602214	4602312	protein_coding	Pcx	exon	ENSMUSG00000024892	ProperStrand	70	chr9	64024966	64024998	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	1	-8.8328
chrX	7401910	7401949	protein_coding	Kcnd1	exon	ENSMUSG00000009731	ProperStrand	19	chr2	26493401	26493425	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-5.9729
chr17	42931538	42931554	protein_coding	Cd2ap	utr3	ENSMUSG00000061665	ProperStrand	44	chr2	26768408	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-6.2123
chr11	117828597	117828629	protein_coding	Socs3	utr3	ENSMUSG00000053113	ProperStrand	137	chr3	122561936	122561954	protein_coding	Pde5a	utr3	ENSMUSG00000053965	NonProperStrand	5	1	-16.7579
chr11	69248829	69248845	protein_coding	Dnahc2	exon	ENSMUSG00000005237	NonProperStrand	6	chr7	117189863	117189892	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-10.9406
chr1	92698923	92698940	protein_coding	Col6a3	exon	ENSMUSG00000048126	NonProperStrand	44	chr19	8798740	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	2	-8.8680
chr15	22261919	22262009	LTR	ORR1D-int	MaLR	chr15ORR1D-int22261936	ProperStrand	1	chr15	22261816	22261896	SINE	B4A	B4	chr15B4A22261827	NonProperStrand	1	1	-inf
chr4	116283851	116283867	protein_coding	Nasp	exon	ENSMUSG00000028693	ProperStrand	64	chr4	131908236	131908298	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-2.5339
chr14	26705518	26705547	protein_coding	Anxa11	exon	ENSMUSG00000021866	ProperStrand	30	chr15	63771249	63771271	protein_coding	Fam49b	exon	ENSMUSG00000022378	ProperStrand	33	2	-19.2665
chr2	103574616	103574679	protein_coding	Nat10	exon	ENSMUSG00000027185	ProperStrand	124	chr16	23110525	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.3254
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr3	151882364	151882419	protein_coding	Fubp1	intron	ENSMUSG00000028034	ProperStrand	56	1	-8.9289
chr8	12757419	12757438	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr9	15514257	15514276	protein_coding	Slc36a4	exon	ENSMUSG00000043885	ProperStrand	94	1	-7.6964
chr17	71193587	71193618	protein_coding	Tgif1	utr3	ENSMUSG00000047407	ProperStrand	64	chr9	15119666	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-2.5183
chr7	86279631	86281571	protein_coding	Mfge8	exon	ENSMUSG00000030605	ProperStrand	73	chr9	120039625	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.9654
chr12	52792469	52792499	protein_coding	Strn3	utr5	ENSMUSG00000020954	ProperStrand	10	chr3	157729963	157729979	protein_coding	Lrrc40	utr3	ENSMUSG00000063052	ProperStrand	147	1	-15.1747
chr1	182823387	182823404	protein_coding	Lefty2	exon	ENSMUSG00000066652	ProperStrand	48	chr12	106269427	106269496	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-4.5656
chr4	140759718	140759808	protein_coding	Fbxo42	utr3	ENSMUSG00000028920	ProperStrand	91	chr12	60141420	60141500	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-6.0068
chr11	106536473	106536563	protein_coding	Pecam1	intron	ENSMUSG00000020717	ProperStrand	56	chr9	120038582	120038672	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	2	-5.4436
chr4	143027927	143028559	protein_coding	Oog4	exon	ENSMUSG00000047799	NonProperStrand	99	chr13	120262674	120262694	protein_coding	4833420G17Rik	exon	ENSMUSG00000062822	ProperStrand	49	1	-12.7189
chr15	76534920	76534937	protein_coding	Recql4	exon	ENSMUSG00000033762	NonProperStrand	6	chr16	23110527	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-16.5279
chr7	3583884	3583984	lincRNA	Gm15927	exon	ENSMUSG00000085039	ProperStrand	3	chr7	116663729	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-8.5982
chr1	178754159	178754175	protein_coding	Sdccag8	intron	ENSMUSG00000026504	ProperStrand	54	chr11	97643007	97643060	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.6533
chr13	49783652	49783962	protein_coding	Iars	exon	ENSMUSG00000037851	ProperStrand	95	chr15	79913288	79913349	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.7642
chr1	51836471	51836498	protein_coding	Myo1b	exon	ENSMUSG00000018417	ProperStrand	31	chr13	55755831	55755847	protein_coding	Ddx46	intron	ENSMUSG00000021500	ProperStrand	87	1	-13.8985
chr3	145759385	145759475	protein_coding	Wdr63	intron	ENSMUSG00000043020	NonProperStrand	5	chr8	106809815	106809905	protein_coding	Cmtm2a	intron	ENSMUSG00000074127	ProperStrand	2	1	-inf
chr11	80204887	80205410	protein_coding	Zfp207	exon	ENSMUSG00000017421	ProperStrand	21	chr16	23110916	23110996	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.5481
chr5	35900497	35900546	protein_coding	2310079F23Rik	exon	ENSMUSG00000029097	ProperStrand	5	chrX	70279390	70279426	protein_coding	Pnma5	utr3	ENSMUSG00000050424	ProperStrand	12	2	-19.7020
chr11	60001911	60001927	protein_coding	Rai1	exon	ENSMUSG00000062115	NonProperStrand	81	chrX	34622906	34622981	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-2.6398
chr17	38290745	38290764	LTR	MurERV4-int	ERVK	chr17MurERV4-int38290059	ProperStrand	21	chr11	63885336	63887052	protein_coding	Cox10	exon	ENSMUSG00000042148	NonProperStrand	187	1	-13.1639
chr18	77368810	77391517	protein_coding	Pias2	intron	ENSMUSG00000025423	ProperStrand	52	chrX	34622906	34623022	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	13	-21.4748
chr2	83644700	83644717	protein_coding	Itgav	utr3	ENSMUSG00000027087	ProperStrand	59	chr15	101924088	101924137	protein_coding	Eif4b	exon	ENSMUSG00000058655	ProperStrand	484	1	-9.1673
chr11	106116665	106116731	protein_coding	Ftsj3	exon	ENSMUSG00000020706	ProperStrand	64	chr17	24665481	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-4.8161
chr17	16398471	16398561	LINE	L1Md_T	L1	chr17L1Md_T16397409	ProperStrand	1	chr7	54442863	54442953	protein_coding	Mrgpra6	intron	ENSMUSG00000052303	ProperStrand	359	1	-inf
chr1	24621519	24621600	protein_coding	Gm10925	utr5	ENSMUSG00000090378	ProperStrand	320	chr17	35089181	35089210	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-2.3902
mmu-miR-6240	1	26	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr7	26559612	26559628	protein_coding	Axl	exon	ENSMUSG00000002602	NonProperStrand	47	1	-6.3857
chr7	117585865	117590599	protein_coding	Sbf2	exon	ENSMUSG00000038371	ProperStrand	17	chr11	68887042	68887064	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-6.6196
chr14	19101643	19101703	protein_coding	Rpl15	exon	ENSMUSG00000012405	ProperStrand	145	chr16	57391758	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	3	-13.8797
chr4	149478503	149478521	protein_coding	Gpr157	utr3	ENSMUSG00000047875	ProperStrand	7	chr12	17552949	17553028	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-9.4553
chr6	38046854	38046944	protein_coding	Atp6v0a4	utr5	ENSMUSG00000038600	ProperStrand	14	chr16	23110909	23110989	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.2008
chr8	72441349	72441429	protein_coding	Gatad2a	exon	ENSMUSG00000036180	ProperStrand	112	chr11	97642953	97643043	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.4788
chr12	112777375	112777446	protein_coding	Eif5	intron	ENSMUSG00000021282	ProperStrand	125	chr1	162966017	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-2.3051
chr18	35108732	35110904	protein_coding	Hspa9	exon	ENSMUSG00000024359	ProperStrand	166	chr17	24857716	24857796	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	6	-7.1329
chr7	150293597	150293613	protein_coding	Kcnq1	exon	ENSMUSG00000009545	NonProperStrand	133	chr18	73693111	73693139	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-3.9971
chr8	130883010	130883027	protein_coding	Nrp1	utr5	ENSMUSG00000025810	NonProperStrand	5	chr16	23111372	23111430	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-5.8178
chr5	122830030	122830083	protein_coding	Gpn3	exon	ENSMUSG00000029464	ProperStrand	19	chr7	52381972	52382009	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	2	-14.3739
chr18	64429223	64429239	antisense	1700091E21Rik	.	ENSMUSG00000086128	ProperStrand	4	chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	1	-15.0461
chr13	54692026	54692065	protein_coding	Higd2a	intron	ENSMUSG00000025868	ProperStrand	5	chr16	23110534	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-7.3464
chr9	21807953	21808142	protein_coding	Prkcsh	exon	ENSMUSG00000003402	ProperStrand	58	chr1	192712615	192712631	protein_coding	Rps6kc1	exon	ENSMUSG00000089872	ProperStrand	241	1	-10.5938
chr19	7103470	7108754	protein_coding	Stip1	exon	ENSMUSG00000024966	ProperStrand	100	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	4	-8.6658
chr12	101914006	101914058	protein_coding	Rps6ka5	intron	ENSMUSG00000021180	ProperStrand	11	chr19	8800085	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	4	-20.5849
chr14	50435048	50435065	LTR	ETnERV2-int	ERVK	chr14ETnERV2-int50434308	ProperStrand	7	chr3	45185238	45185257	protein_coding	Pcdh10	exon	ENSMUSG00000049100	NonProperStrand	2	1	-inf
chr18	42671181	42671200	protein_coding	Tcerg1	exon	ENSMUSG00000024498	ProperStrand	210	chr14	76247737	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	8	-17.3334
chr6	112689098	112689322	protein_coding	Srgap3	exon	ENSMUSG00000030257	NonProperStrand	208	chr18	73693168	73693189	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-3.1757
chr2	119120130	119120146	protein_coding	Vps18	exon	ENSMUSG00000034216	NonProperStrand	40	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-11.2461
chr2	129998669	129998705	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr11	116938556	116938594	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-1.4731
chr7	38354919	38354935	protein_coding	Zfp536	exon	ENSMUSG00000043456	NonProperStrand	236	chr1	162965531	162965550	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.0841
chr17	15842103	15842138	protein_coding	Chd1	utr5	ENSMUSG00000023852	ProperStrand	82	chr4	131866171	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-3.0948
chr9	57788088	57788105	protein_coding	Sema7a	exon	ENSMUSG00000038264	ProperStrand	43	chr11	69483197	69483281	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.0333
chr5	92853370	92853402	protein_coding	Nup54	exon	ENSMUSG00000034826	ProperStrand	16	chr3	94894545	94894591	snoRNA	ENSMUSG00000064952_SNORD62	.	ENSMUSG00000064952	ProperStrand	75	3	-inf
chr15	76720717	76720843	protein_coding	Zfp7	exon	ENSMUSG00000033669	ProperStrand	15	chr4	131908421	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.7937
chr4	116806258	116806307	protein_coding	Plk3	exon	ENSMUSG00000028680	ProperStrand	4	chr18	35716763	35716831	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	4	-inf
chr17	4082194	4082246	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr9	108467106	108467250	protein_coding	Impdh2	exon	ENSMUSG00000062867	ProperStrand	74	1	-9.5441
chr13	19684241	19684258	protein_coding	Epdr1	utr3	ENSMUSG00000002808	ProperStrand	46	chr18	63109676	63109692	protein_coding	Apcdd1	exon	ENSMUSG00000071847	NonProperStrand	254	1	-10.9556
chr1	71692148	71692208	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	chr18	73693111	73693137	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	3	-2.8441
chr7	4456492	4456548	protein_coding	Tnnt1	intron	ENSMUSG00000064179	ProperStrand	19	chr1	162965555	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-9.0252
chr9	66374796	66374981	protein_coding	Usp3	exon	ENSMUSG00000032376	ProperStrand	18	chr7	116664843	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-4.7864
chr9	24549618	24549655	protein_coding	Tbx20	intron	ENSMUSG00000031965	NonProperStrand	110	chr9	15118332	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	3	-6.3574
chr4	140864661	140864701	protein_coding	Epha2	exon	ENSMUSG00000006445	ProperStrand	148	chr8	98269993	98270083	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	7	-18.7687
chr1	137622164	137622185	protein_coding	Csrp1	intron	ENSMUSG00000026421	NonProperStrand	5	chr9	15119646	15119691	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	2	-12.4515
chr9	79603267	79603305	protein_coding	Cox7a2	utr3	ENSMUSG00000032330	ProperStrand	10	chr6	120239375	120239444	protein_coding	B4galnt3	intron	ENSMUSG00000041372	ProperStrand	36	3	-20.3794
chr10	80644992	80645037	protein_coding	Eef2	utr3	ENSMUSG00000034994	ProperStrand	2244	chr3	19528533	19528550	protein_coding	1700064H15Rik	exon	ENSMUSG00000082766	NonProperStrand	78	1	-5.5841
chr6	85895881	85895897	protein_coding	Dusp11	utr3	ENSMUSG00000030002	ProperStrand	37	chr2	26493400	26493485	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-4.6603
chr8	108233711	108233729	protein_coding	4933405L10Rik	exon	ENSMUSG00000013158	ProperStrand	94	chr7	148634699	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-3.1589
chr4	149022232	149022332	protein_coding	Clstn1	utr3	ENSMUSG00000039953	ProperStrand	173	chr1	162965989	162966041	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-1.7819
chr14	56159294	56159312	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	chr4	131908236	131908429	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	4	-1.6321
chr19	5802276	5802376	lincRNA	Malat1	exon	ENSMUSG00000092341	ProperStrand	1077	chr9	64023265	64023329	snoRNA	ENSMUSG00000065829_Snord16a	.	ENSMUSG00000065829	ProperStrand	684	2	-4.9956
chr11	20675535	20675625	LTR	MTA_Mm	MaLR	chr11MTA_Mm20675250	ProperStrand	1	chr15	72824954	72825043	protein_coding	Trappc9	intron	ENSMUSG00000047921	NonProperStrand	53	1	-inf
chr19	44188436	44188492	protein_coding	Cwf19l1	intron	ENSMUSG00000025200	ProperStrand	949	chr7	118219574	118219659	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	5	-2.5094
chr13	58495719	58495922	protein_coding	Hnrnpk	exon	ENSMUSG00000021546	ProperStrand	117	chr11	69481397	69481477	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-3.6934
chr11	17458575	17458594	LINE	L1VL4	L1	chr11L1VL417458097	ProperStrand	5	chr11	102151874	102151939	protein_coding	Atxn7l3	utr3	ENSMUSG00000059995	ProperStrand	24	1	-18.9154
chr18	75407589	75407649	protein_coding	Dym	intron	ENSMUSG00000035765	ProperStrand	22	chr11	69483195	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-10.4574
mmu-miR-3963	2	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr8	13416896	13416915	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	5	-4.3840
chr2	153034705	153034775	protein_coding	Tm9sf4	utr3	ENSMUSG00000068040	ProperStrand	27	chr4	131865856	131865946	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-3.1241
chr15	51794517	51794555	protein_coding	Rad21	utr3	ENSMUSG00000022314	ProperStrand	85	chr7	29136621	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.7991
chr14	68739048	68739102	protein_coding	Nefm	exon	ENSMUSG00000022054	ProperStrand	10	chr11	106934012	106934041	protein_coding	Bptf	exon	ENSMUSG00000040481	ProperStrand	70	1	-16.6757
chr10	110918548	110918638	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	chr7	86611350	86611378	tRNA	tRNA387-ArgTCG	.	287006	ProperStrand	77	1	-2.9973
chr17	35387454	35387554	protein_coding	Ddx39b	intron	ENSMUSG00000019432	ProperStrand	119	chr4	131908826	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-1.0151
chr11	74718931	74719010	snoRNA	ENSMUSG00000077493_Snord91a	.	ENSMUSG00000077493	ProperStrand	511	chr5	74489546	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	3	-1.9760
chr1	93320500	93320517	protein_coding	Per2	exon	ENSMUSG00000055866	NonProperStrand	44	chr18	33954853	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	7	-inf
chr13	113294095	113294185	protein_coding	Il6st	exon	ENSMUSG00000021756	NonProperStrand	3	chr11	6428077	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	NonProperStrand	91	1	-19.6691
chr10	72437415	72437431	LTR	IAP-d-int	ERVK	chr10IAP-d-int72437125	NonProperStrand	730	chr5	140250490	140251335	protein_coding	Ints1	exon	ENSMUSG00000029547	ProperStrand	45	1	-8.8932
chr17	24665420	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	chr8	13876097	13876188	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	7	-4.9047
chr17	24360467	24360498	protein_coding	Ccnf	utr3	ENSMUSG00000072082	ProperStrand	149	chr8	32260335	32260370	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-2.9437
chr17	71194299	71194400	protein_coding	Tgif1	exon	ENSMUSG00000047407	ProperStrand	64	chr3	123210854	123210884	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.9622
chr7	129312998	129313068	protein_coding	Plk1	exon	ENSMUSG00000030867	ProperStrand	146	chr11	97374478	97374552	protein_coding	Srcin1	intron	ENSMUSG00000038453	NonProperStrand	21	1	-13.6570
chr1	66521957	66741103	protein_coding	Unc80	exon	ENSMUSG00000055567	NonProperStrand	212	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-2.3536
chr1	94755057	94755147	protein_coding	Gpc1	utr3	ENSMUSG00000034220	ProperStrand	30	chr10	110918564	110918644	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-4.7609
chr10	53260874	53261344	protein_coding	Mcm9	exon	ENSMUSG00000058298	NonProperStrand	16	chr1	89673529	89673619	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	7	-20.9950
chr8	128269315	128271657	protein_coding	Ntpcr	exon	ENSMUSG00000031851	ProperStrand	7	chr19	8963041	8963121	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-6.3961
chr4	137172295	137172329	protein_coding	Usp48	exon	ENSMUSG00000043411	ProperStrand	135	chr1	162968257	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	1	-5.2250
chr14	31369159	31369215	protein_coding	Tkt	intron	ENSMUSG00000021957	ProperStrand	160	chr5	130300460	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-1.0240
chr17	34089206	34089386	protein_coding	Rps18	exon	ENSMUSG00000008668	ProperStrand	111	chr7	116664817	116664897	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.5583
chr16	37777390	37777408	protein_coding	Fstl1	exon	ENSMUSG00000022816	ProperStrand	179	chr13	49779667	49779742	snoRNA	ENSMUSG00000087963_SNORA84	.	ENSMUSG00000087963	ProperStrand	1409	2	-8.0390
chr1	134018031	134018047	protein_coding	Cdk18	exon	ENSMUSG00000026437	NonProperStrand	1	chr15	79913325	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-inf
chr14	70506803	70506821	protein_coding	Bin3	intron	ENSMUSG00000022089	ProperStrand	4	chr8	13416895	13416916	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	1	-12.1048
chr12	99926834	99926934	protein_coding	Ptpn21	exon	ENSMUSG00000021009	ProperStrand	5	chr17	29818911	29818927	protein_coding	Ftsjd2	exon	ENSMUSG00000024019	NonProperStrand	13	1	-19.9979
chr11	75123732	75123749	protein_coding	Rpa1	exon	ENSMUSG00000000751	NonProperStrand	256	chr18	74938044	74938141	snoRNA	ENSMUSG00000088689_Scarna17	.	ENSMUSG00000088689	ProperStrand	1022	3	-11.3436
chr2	154718675	154718698	protein_coding	a	intron	ENSMUSG00000027596	ProperStrand	6	chr17	24665440	24665498	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	1	-9.6364
chr2	121345156	121368483	protein_coding	Wdr76	exon	ENSMUSG00000027242	ProperStrand	25	chr10	23505152	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	5	-12.3516
chr7	74189893	74189909	protein_coding	Adamts17	intron	ENSMUSG00000058145	NonProperStrand	73	chr19	8798740	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-4.4251
chr9	120615424	120615441	LTR	MLT1H	MaLR	chr9MLT1H120615297	ProperStrand	8	chr7	125321894	125321985	protein_coding	Smg1	exon	ENSMUSG00000030655	ProperStrand	70	1	-17.0617
chr3	94923861	94923882	protein_coding	Vps72	intron	ENSMUSG00000008958	ProperStrand	6	chr1	63225657	63225695	snoRNA	ENSMUSG00000064602_Snora41	.	ENSMUSG00000064602	ProperStrand	1679	1	-11.4075
chr5	127915855	127915945	protein_coding	Tmem132c	intron	ENSMUSG00000034324	NonProperStrand	6	chr5	127907217	127907297	protein_coding	Tmem132c	intron	ENSMUSG00000034324	ProperStrand	25	1	-18.9810
chr1	136485502	136528502	protein_coding	Kdm5b	utr3	ENSMUSG00000042207	ProperStrand	223	chr16	23110827	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	15	-3.7862
chr4	131778209	131778299	protein_coding	Gmeb1	utr3	ENSMUSG00000028901	NonProperStrand	1	chr8	108330098	108330187	protein_coding	Ranbp10	intron	ENSMUSG00000037415	ProperStrand	13	1	-inf
chr7	26057526	26057544	protein_coding	Cic	exon	ENSMUSG00000005442	ProperStrand	80	chr11	97642956	97643091	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.9946
chr17	6138911	6138928	protein_coding	Tulp4	exon	ENSMUSG00000034377	ProperStrand	164	chr7	116663664	116663765	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	2	-1.9676
chr14	113498331	113498350	LINE	L1_Mus1	L1	chr14L1_Mus1113498038	ProperStrand	1	chr8	127557320	127557395	protein_coding	Tsnax	utr3	ENSMUSG00000056820	NonProperStrand	1	1	-inf
chr12	19723413	19723432	LTR	MURVY-int	ERV1	chr12MURVY-int19718193	NonProperStrand	8	chr5	74489595	74489675	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	3	-17.6375
chr2	57090809	57090827	protein_coding	Gpd2	utr5	ENSMUSG00000026827	ProperStrand	93	chr11	25752343	25752360	protein_coding	5730522E02Rik	intron	ENSMUSG00000032985	NonProperStrand	20	1	-14.6485
chr2	164257635	164257652	protein_coding	Sdc4	intron	ENSMUSG00000017009	ProperStrand	177	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.4788
chr9	107947916	107947989	protein_coding	Ip6k1	exon	ENSMUSG00000032594	ProperStrand	61	chr2	120872244	120872260	protein_coding	Tgm5	exon	ENSMUSG00000053675	NonProperStrand	163	1	-11.2745
chr4	43505723	43505813	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr1	93925991	93926010	protein_coding	Hdac4	intron	ENSMUSG00000026313	NonProperStrand	15	1	-5.7264
chr4	47270052	47270068	protein_coding	Col15a1	exon	ENSMUSG00000028339	ProperStrand	17	chr4	131825994	131826127	snRNA	ENSMUSG00000077323_U11	.	ENSMUSG00000077323	NonProperStrand	4	1	-inf
chr9	123541402	123541418	protein_coding	Slc6a20b	exon	ENSMUSG00000025243	ProperStrand	16	chr7	16507047	16507076	protein_coding	Sepw1	intron	ENSMUSG00000041571	ProperStrand	9	1	-19.8224
chr17	35183280	35183296	protein_coding	Msh5	exon	ENSMUSG00000007035	NonProperStrand	4	chr3	88340488	88340504	protein_coding	Mex3a	exon	ENSMUSG00000074480	NonProperStrand	4	1	-inf
chr5	5322630	5322646	protein_coding	Cdk14	intron	ENSMUSG00000028926	ProperStrand	20	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-11.1511
chr9	65127126	65127142	protein_coding	Cilp	exon	ENSMUSG00000042254	ProperStrand	212	chr12	110923174	110923231	snoRNA	ENSMUSG00000084487_SNORD113	.	ENSMUSG00000084487	ProperStrand	183	1	-8.5491
chr1	163747294	163747319	protein_coding	AI848100	utr3	ENSMUSG00000040297	ProperStrand	12	chr19	8800355	8800445	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-6.6789
mmu-miR-6238	2	20	miRNA	mmu-miR-6238	.	mmu-miR-6238	ProperStrand	240	chr17	57142901	57142917	protein_coding	Gtf2f1	exon	ENSMUSG00000002658	NonProperStrand	867	1	-5.2422
chr7	136800631	136800649	SINE	RSINE1	B4	chr7RSINE1136800606	ProperStrand	216	chr1	162965530	162965588	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.2005
chr12	107075667	107075697	protein_coding	Papola	utr3	ENSMUSG00000021111	ProperStrand	67	chr9	15118322	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-3.2651
chr5	73132162	73132178	protein_coding	Txk	intron	ENSMUSG00000054892	NonProperStrand	2	chr8	93517754	93517775	protein_coding	Chd9	intron	ENSMUSG00000056608	NonProperStrand	12	1	-inf
chr1	59539683	59539700	protein_coding	Fzd7	utr5	ENSMUSG00000041075	ProperStrand	373	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-1.2172
chr17	24724370	24724390	protein_coding	Pkd1	exon	ENSMUSG00000032855	ProperStrand	61	chr18	35714144	35714234	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	6	-17.7571
chr15	15461485	15461503	LINE	Lx2A1	L1	chr15Lx2A115460506	ProperStrand	1	chr9	15119287	15119349	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-inf
chr4	138164700	138164718	protein_coding	Vwa5b1	exon	ENSMUSG00000028753	ProperStrand	1	chr4	155032894	155032945	protein_coding	Mib2	intron	ENSMUSG00000029060	ProperStrand	21	1	-inf
chr9	108208779	108239348	protein_coding	Rhoa	utr5	ENSMUSG00000007815	ProperStrand	45	chr4	131908689	131908891	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-8.7911
chr3	96528566	96528600	protein_coding	Polr3c	intron	ENSMUSG00000028099	ProperStrand	16	chr4	56910551	56910629	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	2	-13.9947
chr1	52269186	52271364	protein_coding	Gls	exon	ENSMUSG00000026103	ProperStrand	56	chr9	15118332	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	4	-11.9639
chr8	108437365	108437465	protein_coding	Pskh1	exon	ENSMUSG00000048310	ProperStrand	13	chr10	23505152	23505205	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-3.8218
chr3	84762486	84762536	protein_coding	Fbxw7	exon	ENSMUSG00000028086	ProperStrand	11	chr1	162968447	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	3	-19.8803
chr15	5067655	5068623	protein_coding	Rpl37	exon	ENSMUSG00000041841	ProperStrand	69	chr4	131865856	131865991	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	5	-8.4066
chr11	96325975	96325991	protein_coding	Skap1	utr5	ENSMUSG00000057058	NonProperStrand	7	chr16	23110967	23110988	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.4785
chr13	19684241	19684257	protein_coding	Epdr1	utr3	ENSMUSG00000002808	ProperStrand	46	chr8	98269959	98270076	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	4	-18.3786
chrX	12264319	12266463	protein_coding	Med14	exon	ENSMUSG00000064127	NonProperStrand	22	chr16	23111701	23111775	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.6613
chr17	30693921	30693967	protein_coding	Btbd9	intron	ENSMUSG00000062202	ProperStrand	31	chr9	15119304	15119404	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	1	-6.4086
chr1	155089763	155089829	protein_coding	Lamc1	exon	ENSMUSG00000026478	ProperStrand	239	chr18	33954838	33954928	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-1.2341
chr2	154689595	154689614	protein_coding	Raly	exon	ENSMUSG00000027593	ProperStrand	116	chr15	79913288	79913313	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.4206
chr16	77427817	77427833	protein_coding	2810055G20Rik	intron	ENSMUSG00000090386	NonProperStrand	2	chr17	35299505	35299560	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-12.1680
chr4	114741487	114741504	protein_coding	Tal1	utr3	ENSMUSG00000028717	NonProperStrand	69	chr6	71832550	71832682	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	2	-8.7561
chr16	23110456	23110546	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	chr1	161270415	161270444	snoRNA	ENSMUSG00000089536_Scarna3a	.	ENSMUSG00000089536	ProperStrand	247	2	-1.1293
chr14	120778441	120778502	protein_coding	Mbnl2	exon	ENSMUSG00000022139	ProperStrand	15	chr17	45738464	45738487	protein_coding	Gm7325	exon	ENSMUSG00000079471	ProperStrand	9	1	-19.8655
chr10	74524205	74524221	protein_coding	Bcr	exon	ENSMUSG00000009681	NonProperStrand	23	chr6	29085431	29085448	protein_coding	Rbm28	exon	ENSMUSG00000029701	ProperStrand	24	1	-16.9567
chr2	12270702	12270744	protein_coding	Fam188a	intron	ENSMUSG00000026767	ProperStrand	11	chr16	23110970	23111003	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.6241
chr4	116826699	116826772	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	chr9	120039536	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	8	-0.9385
chr18	80973569	80973652	protein_coding	Atp9b	exon	ENSMUSG00000024566	ProperStrand	30	chr14	76247796	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-5.5134
chr9	41784881	41876045	protein_coding	Sorl1	intron	ENSMUSG00000049313	ProperStrand	112	chr16	23111695	23111831	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	9	-14.1512
chr2	152221194	152221274	protein_coding	Sox12	utr3	ENSMUSG00000051817	ProperStrand	31	chr16	23111737	23111827	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.0285
chr9	45198928	45199653	protein_coding	Fxyd6	exon	ENSMUSG00000066705	NonProperStrand	108	chr9	15119631	15119710	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.6697
chr1	165243148	165243164	protein_coding	Prrx1	utr5	ENSMUSG00000026586	NonProperStrand	28	chr9	15119649	15119700	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.0206
chr14	22663019	22663120	protein_coding-noncoding	Vdac2	utr5	ENSMUSG00000021771	ProperStrand	2	chr9	15119722	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-9.8289
chr4	43569239	43569563	protein_coding	Tln1	exon	ENSMUSG00000028465	ProperStrand	101	chr4	129195100	129195269	protein_coding	Hdac1	exon	ENSMUSG00000028800	ProperStrand	49	1	-12.6768
chr9	78023109	78023148	misc_RNA	7SK	.	ENSMUSG00000065037	ProperStrand	2513	chr1	71647850	71648909	protein_coding	Fn1	exon	ENSMUSG00000026193	ProperStrand	931	1	-1.0855
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr10	13705412	13705432	lincRNA	Gm8330	intron	ENSMUSG00000091527	ProperStrand	631	2	-6.8742
chr9	15119699	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	chr9	40612076	40612151	snoRNA	ENSMUSG00000075924_Snord14d	.	ENSMUSG00000075924	ProperStrand	131	11	-19.5159
chr6	126689271	126689288	protein_coding	Kcna6	exon	ENSMUSG00000038077	ProperStrand	3	chr3	123210910	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-8.0648
chr8	38049667	38049683	LTR	MLT1A0	MaLR	chr8MLT1A038049422	NonProperStrand	91	chr10	105010939	105010957	protein_coding	Tmtc2	utr5	ENSMUSG00000036019	ProperStrand	72	1	-12.1102
chr3	128597484	128597500	LINE	L1MD2	L1	chr3L1MD2128597388	ProperStrand	9	chr10	126497182	126497200	protein_coding	March9	utr5	ENSMUSG00000040502	ProperStrand	25	1	-18.8861
chr2	133806896	133806915	LTR	MLT1G	MaLR	chr2MLT1G133806773	ProperStrand	65	chr1	40053934	40053951	protein_coding	Map4k4	exon	ENSMUSG00000026074	ProperStrand	348	1	-9.6306
chr5	65703645	65703665	protein_coding	Rfc1	intron	ENSMUSG00000029191	ProperStrand	53	chr8	98269958	98270085	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-5.7847
chr1	120579242	120581619	protein_coding	Tfcp2l1	utr3	ENSMUSG00000026380	ProperStrand	158	chr11	62416603	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-5.6983
chr11	62416563	62418001	lincRNA	2410006H16Rik	intron	ENSMUSG00000086841	ProperStrand	525	chr3	123210854	123210973	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	6	-1.2148
chr3	88949644	88949661	protein_coding	Pklr	utr3	ENSMUSG00000041237	ProperStrand	5	chr1	89673566	89673588	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-8.2536
chrX	149045859	149045949	protein_coding	Shroom2	utr3	ENSMUSG00000045180	ProperStrand	9	chr4	131908727	131908807	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.5343
chr9	24549564	24549595	protein_coding	Tbx20	intron	ENSMUSG00000031965	NonProperStrand	110	chr1	162965531	162965577	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-3.9618
chr12	88289017	88289034	protein_coding	2310044G17Rik	intron	ENSMUSG00000034157	ProperStrand	48	chr7	52713907	52714007	protein_coding	Ftl1	exon	ENSMUSG00000050708	ProperStrand	807	1	-8.5639
chr3	122334697	122334715	SINE	B3	B2	chr3B3122334636	NonProperStrand	2	chr16	23111707	23111832	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-8.9529
chr11	100414998	100415014	protein_coding	Ttc25	exon	ENSMUSG00000006784	NonProperStrand	119	chr8	24556766	24556782	protein_coding	Sfrp1	exon	ENSMUSG00000031548	ProperStrand	22	1	-13.9724
chr5	137969485	137969560	protein_coding	Gnb2	utr3	ENSMUSG00000029713	ProperStrand	23	chr5	130300494	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-4.2653
chr15	58733099	58733149	protein_coding	Rnf139	utr3	ENSMUSG00000037075	ProperStrand	5	chr1	162965539	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-8.2678
chr16	38582209	38582225	protein_coding	Tmem39a	exon	ENSMUSG00000002845	NonProperStrand	334	chr3	88715215	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-3.9035
chr2	163484216	163546869	protein_coding	Pkig	utr5	ENSMUSG00000035268	ProperStrand	13	chr7	91047411	91047429	protein_coding	Mesdc2	utr3	ENSMUSG00000038503	ProperStrand	19	1	-18.8581
chr4	131908357	131908457	processed_transcript	Snhg3	.	ENSMUSG00000085241	ProperStrand	1244	chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	1	-4.4954
chr16	32632211	32632229	protein_coding	Tfrc	utr3	ENSMUSG00000022797	ProperStrand	71	chr8	13876097	13876226	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	1	-6.8094
chr7	116664024	116664068	protein_coding	Rpl27a	exon	ENSMUSG00000046364	ProperStrand	149	chr8	125571797	125571815	protein_coding	Gm20388	intron	ENSMUSG00000092329	ProperStrand	295	1	-8.3010
chr2	84478974	84479001	protein_coding	Ctnnd1	intron	ENSMUSG00000034101	ProperStrand	26	chr7	116664808	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-6.8718
chr12	92805987	92806008	protein_coding	Gtf2a1	exon	ENSMUSG00000020962	ProperStrand	61	chr8	122574237	122574254	protein_coding	Crispld2	utr3	ENSMUSG00000031825	ProperStrand	2	1	-21.5016
chr1	102076754	102076790	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	chr17	35088971	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-2.2803
chr6	142447071	142447161	protein_coding	Ldhb	exon	ENSMUSG00000030246	ProperStrand	224	chr6	71832602	71832682	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	1	-3.1230
chr7	81900679	81900769	LINE	L1MC4	L1	chr7L1MC481900468	ProperStrand	1	chr7	81900899	81900979	LTR	MLT1A0	MaLR	chr7MLT1A081900909	NonProperStrand	1	1	-inf
chr12	116716644	116716734	LINE	Lx	L1	chr12Lx116715332	ProperStrand	1	chr7	9052841	9052921	pseudogene	Gm5583	.	ENSMUSG00000092575	ProperStrand	1	1	-inf
chr11	68886928	68887035	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	chr19	8799580	8799645	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	7	-1.9542
chr3	88372025	88372062	protein_coding	Ubqln4	exon	ENSMUSG00000008604	ProperStrand	49	chr11	69483135	69483237	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	4	-9.8849
chr16	31983551	31983625	protein_coding	Senp5	intron	ENSMUSG00000022772	ProperStrand	8	chr3	88497880	88497980	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-11.5861
chr4	43429480	43429560	protein_coding	Rusc2	exon	ENSMUSG00000035969	ProperStrand	22	chr12	106269300	106269390	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	3	-14.1387
chr10	60563077	60563162	protein_coding	Sgpl1	utr3	ENSMUSG00000020097	ProperStrand	34	chr2	26493396	26493486	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	4	-15.2206
chr2	167836656	167836680	antisense	Gm14236	.	ENSMUSG00000086411	ProperStrand	108	chr1	101743597	101743615	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	1	-8.2591
chr8	63440262	63440371	protein_coding	Clcn3	intron	ENSMUSG00000004319	ProperStrand	93	chr17	35647493	35647527	protein_coding	Pou5f1	utr3	ENSMUSG00000024406	ProperStrand	104	1	-11.3280
chr1	153602594	153602610	protein_coding	Edem3	utr5	ENSMUSG00000043019	ProperStrand	84	chr11	98878376	98878466	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	2	-9.1841
chr18	53842798	53842898	protein_coding	Cep120	utr3	ENSMUSG00000048799	ProperStrand	91	chr7	148634804	148634838	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-3.2174
chr3	95480876	95480892	protein_coding	Adamtsl4	exon	ENSMUSG00000015850	NonProperStrand	4	chr16	57391625	57391724	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	1	-15.9672
chr15	77356785	77356801	protein_coding	Apol7c	exon	ENSMUSG00000044309	ProperStrand	197	chr5	147646411	147646460	snoRNA	ENSMUSG00000077185_SNORD102	.	ENSMUSG00000077185	ProperStrand	142	1	-9.2014
chr12	112781431	112781447	protein_coding	Eif5	exon	ENSMUSG00000021282	NonProperStrand	2	chr11	69483151	69483239	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	NonProperStrand	35	1	-inf
chr14	8860842	8860859	protein_coding	Abhd6	exon	ENSMUSG00000025277	ProperStrand	2	chr7	30116482	30117281	protein_coding	Sipa1l3	exon	ENSMUSG00000030583	NonProperStrand	19	1	-inf
chr4	95690612	95690702	protein_coding	Hook1	utr3	ENSMUSG00000028572	ProperStrand	49	chr10	39978406	39978486	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	1	-5.8567
chr9	115219430	115219466	protein_coding	Stt3b	utr5	ENSMUSG00000032437	ProperStrand	66	chr11	69483190	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-2.2889
chr15	95050371	95050387	protein_coding	Nell2	utr3	ENSMUSG00000022454	ProperStrand	64	chr18	35716762	35716856	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.0639
chr16	17845099	17845189	protein_coding	Dgcr2	exon	ENSMUSG00000003166	ProperStrand	45	chr11	101466263	101466343	snRNA	ENSMUSG00000065820_U2	.	ENSMUSG00000065820	ProperStrand	552	1	-9.4500
chr9	66219744	66219834	protein_coding	Herc1	exon	ENSMUSG00000038664	ProperStrand	81	chr10	110918549	110918629	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-2.9073
chr16	21220714	21220735	protein_coding	Ephb3	exon	ENSMUSG00000005958	ProperStrand	23	chr18	61740046	61740098	protein_coding	Csnk1a1	exon	ENSMUSG00000024576	ProperStrand	64	1	-15.1176
chr1	87986619	87986635	protein_coding	Psmd1	exon	ENSMUSG00000026229	ProperStrand	664	chr8	98388427	98388458	protein_coding	Got2	utr3	ENSMUSG00000031672	ProperStrand	85	1	-7.8083
chr4	125815025	125816077	protein_coding	Stk40	exon	ENSMUSG00000042608	ProperStrand	32	chr5	130300476	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.6387
chr6	31445106	31445125	protein_coding	Mkln1	intron	ENSMUSG00000025609	ProperStrand	18	chr2	166890545	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-9.9904
chr2	24252876	24252892	protein_coding	Psd4	exon	ENSMUSG00000026979	NonProperStrand	3	chr9	120037944	120038034	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-10.9964
chr14	31998225	31998502	protein_coding	Nisch	exon	ENSMUSG00000021910	ProperStrand	125	chr11	120489147	120489185	protein_coding	Mafg	utr3	ENSMUSG00000051510	ProperStrand	23	1	-13.7812
chr5	97514412	97514431	protein_coding	Paqr3	intron	ENSMUSG00000055725	ProperStrand	10	chr7	116664817	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-9.8555
chr17	13116524	13117251	protein_coding	Tcp1	exon	ENSMUSG00000068039	ProperStrand	116	chr10	23505551	23505631	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	6	-20.0446
chr8	67881439	67881456	LTR	MTEa-int	MaLR	chr8MTEa-int67880462	ProperStrand	39	chr11	114533143	114533624	protein_coding	Rpl38	utr3	ENSMUSG00000057322	ProperStrand	29	1	-15.6638
chr13	67718594	67718637	protein_coding	A530054K11Rik	utr3	ENSMUSG00000021510	ProperStrand	6	chr1	89681224	89681324	snoRNA	ENSMUSG00000089281_Scarna6	.	ENSMUSG00000089281	ProperStrand	3146	6	-inf
chr7	16524897	16524955	protein_coding	Gltscr2	exon	ENSMUSG00000041560	ProperStrand	127	chr13	53073980	53073997	protein_coding	Nfil3	intron	ENSMUSG00000056749	NonProperStrand	66	1	-11.6160
chr18	38116113	38116129	protein_coding	Rell2	exon	ENSMUSG00000044024	NonProperStrand	43	chr1	162967784	162967806	snoRNA	ENSMUSG00000065735_SNORD77	.	ENSMUSG00000065735	ProperStrand	277	1	-10.9190
chr10	80642406	80642457	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr11	96112970	96112987	protein_coding	Gm53	exon	ENSMUSG00000078706	NonProperStrand	16	1	-8.7566
chr2	26493366	26493519	lincRNA	Snhg7	exon	ENSMUSG00000091299	ProperStrand	2137	chr4	153534526	153534542	protein_coding	Tprgl	exon	ENSMUSG00000029030	ProperStrand	50	1	-6.5554
chr12	86323277	86324176	protein_coding	Fcf1	utr3	ENSMUSG00000021243	ProperStrand	2	chr13	54723202	54723218	protein_coding	Faf2	exon	ENSMUSG00000025873	ProperStrand	90	1	-20.9738
chr6	136709185	136709201	protein_coding	Gucy2c	exon	ENSMUSG00000042638	NonProperStrand	21	chr11	6428089	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-5.1873
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr6	113071762	113071799	protein_coding	Setd5	exon	ENSMUSG00000034269	ProperStrand	162	1	-5.0789
chr1	90161578	90161668	protein_coding	Hjurp	utr3	ENSMUSG00000044783	ProperStrand	110	chr1	162965531	162965595	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.2201
chr7	139335361	139335377	protein_coding	Cpxm2	exon	ENSMUSG00000030862	ProperStrand	20	chr17	35089182	35089233	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-7.6750
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr3	85942727	85942780	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	1	-1.3731
mmu-miR-6240	3	25	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr7	74516861	74516877	protein_coding	Mef2a	intron	ENSMUSG00000030557	ProperStrand	18	1	-8.3164
chr16	20542714	20542778	protein_coding	Ap2m1	exon	ENSMUSG00000022841	ProperStrand	23	chr3	152450610	152450626	protein_coding	Pigk	utr3	ENSMUSG00000039047	ProperStrand	571	1	-10.7425
chr2	146162276	146162366	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	ProperStrand	35	chr7	116663649	116663729	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.4745
chr13	28845877	28845957	lincRNA	2610307P16Rik	intron	ENSMUSG00000085936	ProperStrand	154	chr18	35716792	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-0.8257
chr7	118218231	118218321	protein_coding	Eif4g2	exon	ENSMUSG00000005610	ProperStrand	134	chr8	73419706	73419786	snoRNA	ENSMUSG00000077563_Snora68	.	ENSMUSG00000077563	ProperStrand	10759	2	-3.2513
chr11	27240343	27240433	LTR	ORR1A3-int	MaLR	chr11ORR1A3-int27240093	NonProperStrand	1	chr11	27240612	27240692	LTR	ORR1A3	MaLR	chr11ORR1A327240543	NonProperStrand	1	1	-inf
chr5	115940261	115940407	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	chr7	118219574	118219650	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	2	-1.2591
chr5	144182649	144182731	protein_coding	Kdelr2	utr3	ENSMUSG00000079111	ProperStrand	25	chrX	71517865	71517906	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-8.2991
chr14	15572352	15572368	protein_coding	Slc4a7	exon	ENSMUSG00000021733	NonProperStrand	165	chr4	56910550	56910625	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	1	-4.1523
chr17	63849714	63849731	Low_complexity	GC_rich	Low_complexity	chr17GC_rich63849693	NonProperStrand	1	chr19	5800778	5800898	lincRNA	Malat1	exon	ENSMUSG00000092341	NonProperStrand	5	1	-inf
chr9	107481498	107481598	protein_coding	Nat6	utr5	ENSMUSG00000079334	ProperStrand	5	chr3	123210854	123210930	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-6.8746
chrX	57389473	57406099	protein_coding	Mcf2	exon	ENSMUSG00000031139	ProperStrand	5	chr9	15118322	15118376	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-8.4764
chr19	37285274	37291683	protein_coding	March5	exon	ENSMUSG00000023307	ProperStrand	17	chr19	8799054	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-8.3609
chr5	74489298	74489324	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr2	79843543	79843559	protein_coding	Pde1a	intron	ENSMUSG00000059173	NonProperStrand	275	2	-4.8157
chr9	110544350	110544366	protein_coding	Nbeal2	exon	ENSMUSG00000056724	ProperStrand	161	chr18	73693166	73693187	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-3.6420
chr4	126879917	126879935	protein_coding	Dlgap3	intron	ENSMUSG00000042388	NonProperStrand	4	chr15	82071818	82074585	protein_coding	Cenpm	exon	ENSMUSG00000068101	ProperStrand	6	1	-19.4007
chr9	21599551	21599585	protein_coding	Kank2	exon	ENSMUSG00000032194	ProperStrand	196	chr19	8800384	8800474	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-1.5334
chr11	77994464	77994482	protein_coding	Rpl23a	utr3	ENSMUSG00000058546	ProperStrand	121	chr11	97642952	97643003	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-1.3681
chr10	75322117	75322574	protein_coding	Mif	utr3	ENSMUSG00000033307	ProperStrand	146	chr16	23110909	23111010	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	14	-6.8568
chr7	30066742	30066842	protein_coding	Spint2	utr5	ENSMUSG00000074227	ProperStrand	82	chr7	116663692	116663711	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-1.9926
chr4	142175506	142175596	LTR	LTR33	ERVL	chr4LTR33142175473	ProperStrand	1	chr13	40264230	40264310	protein_coding	Ofcc1	intron	ENSMUSG00000047094	ProperStrand	6	1	-inf
chr12	60141415	60141510	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	chr10	23505564	23505627	snoRNA	ENSMUSG00000080486_Snord100	.	ENSMUSG00000080486	ProperStrand	1074	2	-2.8969
chr1	183758992	183761715	protein_coding	Lbr	exon	ENSMUSG00000004880	ProperStrand	97	chr19	8963092	8963172	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.5180
chr15	78919994	78920023	protein_coding	Eif3l	exon	ENSMUSG00000033047	ProperStrand	81	chr4	88054883	88056549	protein_coding	BC057079	exon	ENSMUSG00000038368	ProperStrand	52	3	-19.5805
chr18	86882305	86882322	protein_coding	Cbln2	utr5	ENSMUSG00000024647	ProperStrand	7	chr1	180181137	180181161	protein_coding	Pppde1	utr3	ENSMUSG00000026502	ProperStrand	27	1	-20.1338
chr7	5048810	5048852	protein_coding	Epn1	exon	ENSMUSG00000035203	ProperStrand	15	chr16	23110981	23111008	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.0842
chr11	100831794	100831894	protein_coding	Ptrf	utr5	ENSMUSG00000004044	ProperStrand	14	chr9	120039540	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	4	-19.3500
chr6	136770070	136772883	protein_coding	Wbp11	exon	ENSMUSG00000030216	ProperStrand	87	chr16	23111398	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-1.6250
chrX	132424714	132424731	protein_coding	Bhlhb9	exon	ENSMUSG00000072964	ProperStrand	11	chr8	98270015	98270082	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-8.9630
chr5	108336377	108336410	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	chr14	52829459	52829568	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	1	-0.6986
chr8	60111417	60111507	protein_coding	Galnt7	intron	ENSMUSG00000031608	NonProperStrand	16	chr1	148604516	148604596	protein_coding	Fam5c	intron	ENSMUSG00000035131	NonProperStrand	3	1	-inf
chr2	57090809	57090827	protein_coding	Gpd2	utr5	ENSMUSG00000026827	ProperStrand	93	chr5	108334200	108334325	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-3.9858
chr11	69470501	69470567	protein_coding	Mpdu1	utr3	ENSMUSG00000018761	ProperStrand	11	chr10	127428422	127428438	protein_coding	Hsd17b6	exon	ENSMUSG00000025396	NonProperStrand	68	2	-19.1478
chr7	30155630	30155647	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	NonProperStrand	19	chr4	131865855	131865912	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-6.4425
chr1	184271700	184271716	protein_coding	Fbxo28	exon	ENSMUSG00000047539	ProperStrand	27	chr9	64143735	64143803	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-9.3795
chr10	79100385	79100401	protein_coding	Shc2	exon	ENSMUSG00000020312	ProperStrand	1	chr11	62416575	62416615	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-inf
chr17	24583609	24583766	protein_coding	E4f1	exon	ENSMUSG00000024137	ProperStrand	5	chr14	33005038	33005072	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	2	-14.6999
chr7	105241576	105241666	protein_coding	Myo7a	intron	ENSMUSG00000030761	NonProperStrand	33	chr8	129468801	129468881	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	6	-19.5326
chr10	80181367	80181404	protein_coding	Ap3d1	intron	ENSMUSG00000020198	ProperStrand	42	chr9	120038479	120038569	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.6915
chr9	15130737	15130796	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-4.9410
chr3	104880588	104880702	protein_coding	4930564D02Rik	utr5	ENSMUSG00000051788	ProperStrand	28	chr4	141102710	141102728	pseudogene	B330016D10Rik	.	ENSMUSG00000048406	NonProperStrand	1	1	-inf
chr5	122304435	122304452	protein_coding	Fam109a	utr3	ENSMUSG00000044134	ProperStrand	12	chr15	34370543	34370607	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-6.6995
chr14	58420848	58420911	protein_coding	Sap18	exon	ENSMUSG00000021963	ProperStrand	9	chr16	23110909	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-8.1007
chr17	39979957	39980012	DNA	FordPrefect	Tip100	chr17FordPrefect39979942	ProperStrand	1267	chr3	142351261	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	2	-3.6984
chr18	25813397	25813414	protein_coding	Celf4	intron	ENSMUSG00000024268	ProperStrand	21	chr1	89345713	89345777	protein_coding	Gigyf2	utr3	ENSMUSG00000048000	ProperStrand	128	1	-13.9189
chrX	122712659	122712739	LINE	L1_Mus2	L1	chrXL1_Mus2122711584	NonProperStrand	1	chrY	2878661	2878751	LINE	L1_Mm	L1	chrYL1_Mm2877424	NonProperStrand	1	1	-inf
chr7	53089954	53089977	protein_coding	Grin2d	intron	ENSMUSG00000002771	NonProperStrand	31	chr5	108334255	108334327	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	1	-6.1139
chr12	87597836	87597859	protein_coding	1700020O03Rik	exon	ENSMUSG00000021254	ProperStrand	4	chr16	23110456	23110526	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-7.8518
mmu-miR-291a-5p	2	22	miRNA	mmu-miR-291a-5p	.	mmu-miR-291a-5p	ProperStrand	8	chr8	98269959	98270082	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-9.6351
chr4	53873568	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	chr16	23110454	23110568	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	6	-2.1192
chr13	55348208	55414967	protein_coding	Nsd1	exon	ENSMUSG00000021488	ProperStrand	186	chr7	116664820	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	5	-5.6864
chr8	13876096	13876187	snoRNA	ENSMUSG00000065817_SNORA3	.	ENSMUSG00000065817	ProperStrand	1319	chr1	89673673	89673787	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	23	-15.4659
chr8	74119039	74119055	protein_coding	Pgls	exon	ENSMUSG00000031807	ProperStrand	8	chr19	8798745	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-8.8700
chr3	94688866	94688934	protein_coding	Psmb4	exon	ENSMUSG00000005779	ProperStrand	26	chr3	101408434	101408490	protein_coding	Atp1a1	utr5	ENSMUSG00000033161	ProperStrand	316	5	-inf
chr4	40883509	40883525	protein_coding	Bag1	utr3	ENSMUSG00000028416	NonProperStrand	2	chr16	23110828	23110914	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr19	42836751	42836958	protein_coding	Hps1	exon	ENSMUSG00000025188	ProperStrand	13	chr10	107800720	107800800	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	1	-11.1797
chr3	146162945	146166271	protein_coding	Gng5	exon	ENSMUSG00000068523	ProperStrand	13	chr4	53873614	53873645	rRNA	n-R5s185	.	ENSMUSG00000065887	ProperStrand	506	2	-18.7196
chr10	93624076	93624094	protein_coding	Nr2c1	intron	ENSMUSG00000005897	ProperStrand	3	chr11	116938694	116938732	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-12.4979
chr9	50816824	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	chr4	125839502	125839704	protein_coding	1700029G01Rik	exon	ENSMUSG00000073758	ProperStrand	523	1	-7.4826
chr8	72474649	72498000	protein_coding	Gatad2a	utr5	ENSMUSG00000036180	NonProperStrand	214	chr18	33248103	33248119	protein_coding	Camk4	intron	ENSMUSG00000038128	NonProperStrand	42	1	-11.4822
mmu-miR-6240	1	24	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr17	23747933	23747951	protein_coding	Zscan10	utr3	ENSMUSG00000023902	NonProperStrand	1	1	-inf
chr2	29866263	29866454	protein_coding	Spna2	exon	ENSMUSG00000057738	ProperStrand	222	chr6	125136482	125136572	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	1	-3.9159
chr10	78989732	78989832	protein_coding	Ppap2c	utr3	ENSMUSG00000052151	ProperStrand	2	chr2	130101989	130102050	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-12.7710
chr7	25652464	25652482	protein_coding	Lypd4	intron	ENSMUSG00000062732	ProperStrand	1	chr11	106362640	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-inf
chr5	100855944	100855974	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr4	116875134	116875224	snRNA	ENSMUSG00000070228_U5	.	ENSMUSG00000070228	ProperStrand	131	1	-5.1081
chr10	60896366	60896435	protein_coding	Eif4ebp2	utr3	ENSMUSG00000020091	ProperStrand	39	chr7	29136619	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	2	-5.3874
chr4	155115206	155123097	protein_coding	Atad3a	utr3	ENSMUSG00000029036	ProperStrand	28	chr16	23111375	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-9.0546
chr17	34733883	34733953	protein_coding	Pbx2	utr3	ENSMUSG00000034673	ProperStrand	19	chr9	64143751	64143841	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-10.0960
chr7	52013137	52013158	protein_coding	Vrk3	exon	ENSMUSG00000002205	ProperStrand	22	chr3	88497852	88497979	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-9.4817
chr12	44844119	44844156	snoRNA	ENSMUSG00000065004_SNORA33	.	ENSMUSG00000065004	ProperStrand	111	chr4	131908356	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	5	-4.7931
chr4	57814296	57814336	protein_coding	Akap2	intron	ENSMUSG00000038729	ProperStrand	14	chr10	110918643	110918692	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	3	-14.6309
chr17	46160646	46160700	protein_coding	Vegfa	intron	ENSMUSG00000023951	ProperStrand	43	chr1	155287315	155287355	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	1	-9.6492
chr11	102701557	102701575	protein_coding-noncoding	Eftud2	utr3	ENSMUSG00000020929	ProperStrand	1	chr5	65654024	65654161	protein_coding	Rfc1	utr3	ENSMUSG00000029191	ProperStrand	53	1	-inf
chr15	79996615	79996705	LTR	MTA_Mm	MaLR	chr15MTA_Mm79996476	ProperStrand	1	chr2	154412809	154412889	protein_coding	Pxmp4	utr3	ENSMUSG00000000876	ProperStrand	1	1	-inf
chr7	29605569	29605670	protein_coding	Hnrnpl	exon	ENSMUSG00000015165	ProperStrand	150	chr12	81618868	81618891	snoRNA	ENSMUSG00000093141_AC163282.1	.	ENSMUSG00000093141	ProperStrand	39	1	-12.3434
chr4	125388848	125389130	protein_coding	Grik3	utr3	ENSMUSG00000001985	ProperStrand	126	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	5	-0.8790
chr2	164311966	164311983	protein_coding	Dbndd2	utr5	ENSMUSG00000017734	ProperStrand	53	chr19	9004433	9005295	protein_coding	Eml3	exon	ENSMUSG00000071647	ProperStrand	19	1	-15.8894
chr14	56159294	56159311	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	chr15	34370545	34370625	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-1.5489
chr5	34692656	34693441	protein_coding	Rnf4	exon	ENSMUSG00000029110	ProperStrand	27	chr13	47138915	47138934	protein_coding	Kdm1b	utr5	ENSMUSG00000038080	ProperStrand	7	1	-inf
chr8	23288049	23288200	protein_coding	Ckap2	exon	ENSMUSG00000037725	ProperStrand	69	chr14	63287588	63287612	protein_coding	Serpine3	intron	ENSMUSG00000091155	ProperStrand	210	2	-16.6005
chr8	72613823	72613839	protein_coding	Hapln4	utr3	ENSMUSG00000007594	NonProperStrand	85	chr17	27559700	27559717	protein_coding	Grm4	utr3	ENSMUSG00000063239	ProperStrand	147	1	-10.8146
chr7	52383790	52383841	protein_coding	Rpl13a	intron	ENSMUSG00000074129	ProperStrand	269	chr17	35088957	35088998	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-3.0313
chr13	99086252	99086878	protein_coding	Btf3	utr5	ENSMUSG00000021660	ProperStrand	64	chr11	97642991	97643080	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.3622
chr1	72290907	72290987	snRNA	ENSMUSG00000093111_AC120136.1	.	ENSMUSG00000093111	ProperStrand	137	chr14	76247794	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	4	-9.4318
chr5	122691914	122691930	protein_coding	Hvcn1	utr3	ENSMUSG00000064267	ProperStrand	182	chr19	8799021	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	2	-6.2636
chr11	114469489	114469505	SINE	B3A	B2	chr11B3A114469438	NonProperStrand	1	chr3	108357255	108357330	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-inf
chr13	9833560	9833666	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr7	69921442	69921458	LINE	Lx	L1	chr7Lx69921099	NonProperStrand	2	2	-inf
chr1	172680885	172680901	protein_coding	Atf6	intron	ENSMUSG00000026663	ProperStrand	35	chr2	63936035	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	1	-8.9433
chr1	159816638	159816655	LTR	MLT1H2	MaLR	chr1MLT1H2159816576	ProperStrand	14	chr5	54389948	54389967	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	1	-13.7456
chr15	82001615	82001705	protein_coding	Srebf2	exon	ENSMUSG00000022463	ProperStrand	592	chr17	35299519	35299599	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-0.9400
chr5	54389948	54389964	protein_coding	Stim2	utr5	ENSMUSG00000039156	ProperStrand	212	chr4	129364078	129364095	protein_coding	Tmem39b	exon	ENSMUSG00000053730	ProperStrand	4	1	-16.4416
chr13	28653437	28700391	lincRNA	2610307P16Rik	exon	ENSMUSG00000085936	ProperStrand	154	chr2	79299649	79299665	lincRNA	Gm17325	exon	ENSMUSG00000090313	NonProperStrand	5	1	-16.5572
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr9	65044377	65044422	snRNA	ENSMUSG00000075763_U5	.	ENSMUSG00000075763	ProperStrand	216	1	-4.5275
chr1	182838103	182838193	protein_coding	Pycr2	utr3	ENSMUSG00000026520	NonProperStrand	2	chr15	88948292	88948372	protein_coding	Tubgcp6	intron	ENSMUSG00000051786	NonProperStrand	3	1	-inf
chr11	33192651	33192705	protein_coding	Ranbp17	intron	ENSMUSG00000040594	ProperStrand	20	chr15	99433433	99433451	protein_coding	Aqp6	exon	ENSMUSG00000043144	NonProperStrand	45	1	-16.1119
chr11	69037669	69037685	protein_coding	Gucy2e	exon	ENSMUSG00000020890	NonProperStrand	99	chr2	132132810	132132826	protein_coding	Cds2	utr3	ENSMUSG00000058793	ProperStrand	47	1	-12.8017
chr19	10931961	10932041	protein_coding-noncoding	Slc15a3	utr5	ENSMUSG00000024737	ProperStrand	2	chr19	10931825	10932206	protein_coding	Slc15a3	exon	ENSMUSG00000024737	ProperStrand	1	1	-inf
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr1	93263063	93263079	protein_coding	Fam132b	exon	ENSMUSG00000047443	NonProperStrand	98	1	-7.6135
chr8	13416896	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr17	13115738	13115784	snoRNA	ENSMUSG00000064637_Snora20	.	ENSMUSG00000064637	ProperStrand	1083	3	-3.8406
chr4	136558966	136559037	protein_coding	Zbtb40	intron	ENSMUSG00000060862	ProperStrand	33	chrX	34622906	34622961	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	3	-10.3930
chr2	135741285	135741305	protein_coding	Plcb4	intron	ENSMUSG00000039943	ProperStrand	50	chr9	120038491	120038551	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-3.3693
chr13	74836814	74836835	protein_coding	Cast	intron	ENSMUSG00000021585	NonProperStrand	3	chr5	111215207	111215333	protein_coding	Ulk1	exon	ENSMUSG00000029512	ProperStrand	92	1	-19.5967
chr1	158311276	158311297	protein_coding	9430070O13Rik	intron	ENSMUSG00000026601	ProperStrand	2	chr5	147646801	147646848	snoRNA	ENSMUSG00000077564_SNORA27	.	ENSMUSG00000077564	ProperStrand	874	1	-15.4219
chr5	75473198	75473215	protein_coding	Gsx2	utr3	ENSMUSG00000035946	ProperStrand	307	chr4	131866154	131866284	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-1.0206
chr1	179726398	179726498	protein_coding	Adss	exon	ENSMUSG00000015961	ProperStrand	23	chr5	108336421	108336495	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-6.7734
chr13	93209562	93209578	protein_coding	Ankrd34b	exon	ENSMUSG00000045034	NonProperStrand	28	chr2	26493410	26493484	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-5.2032
chr8	73392686	73392732	protein_coding	Ccdc124	exon	ENSMUSG00000007721	ProperStrand	11	chr18	35102298	35102340	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-10.0321
chr2	31924012	31924028	protein_coding	Fam78a	utr3	ENSMUSG00000050592	NonProperStrand	340	chr6	70805448	70805516	snoRNA	ENSMUSG00000065750_SNORA5	.	ENSMUSG00000065750	ProperStrand	165	1	-7.8161
chr8	107142819	107142835	protein_coding	Cdh16	exon	ENSMUSG00000031881	NonProperStrand	8	chr7	116664794	116664919	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	6	-19.1769
chr7	30231492	30231592	protein_coding	Sipa1l3	intron	ENSMUSG00000030583	ProperStrand	559	chr1	162966813	162966851	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-2.1234
chr17	95160909	95218243	Satellite	MMSAT4	Satellite	chr17MMSAT495216724	NonProperStrand	14	chr2	145540363	145540380	lincRNA	BC039771	exon	ENSMUSG00000087594	ProperStrand	12	1	-22.4876
chr16	91625725	91628273	protein_coding	Gart	exon	ENSMUSG00000022962	ProperStrand	200	chr1	135285746	135285764	protein_coding	Sox13	intron	ENSMUSG00000070643	NonProperStrand	12	1	-14.1872
chr4	41673405	41673421	protein_coding	Il11ra1	intron	ENSMUSG00000073889	ProperStrand	128	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-3.5700
chr11	58998753	58999452	protein_coding	Guk1	exon	ENSMUSG00000020444	ProperStrand	18	chr15	98350168	98350248	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-7.1449
chr10	79499302	79499336	protein_coding	Polr2e	exon	ENSMUSG00000004667	ProperStrand	37	chr10	110918549	110918639	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-4.3564
chr19	43948614	43977109	protein_coding	Dnmbp	exon	ENSMUSG00000025195	ProperStrand	15	chr3	123210858	123210948	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-7.7072
chr4	43505657	43505721	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr10	95004024	95004063	protein_coding	Ube2n	exon	ENSMUSG00000074781	ProperStrand	10	1	-6.5547
mmu-miR-1949	7	24	miRNA	mmu-miR-1949	.	mmu-miR-1949	ProperStrand	794	chr5	115939529	115939611	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-2.9101
chr1	183758852	183758923	protein_coding	Lbr	exon	ENSMUSG00000004880	ProperStrand	97	chr15	34370546	34370636	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-2.6872
chr1	181027187	181027205	protein_coding	Smyd3	intron	ENSMUSG00000055067	ProperStrand	231	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.1118
chr19	10696129	10699762	protein_coding	Ddb1	exon	ENSMUSG00000024740	ProperStrand	304	chr7	116664819	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	5	-3.4573
chr9	120037933	120037975	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	chr8	87574143	87574175	snoRNA	ENSMUSG00000077527_SNORD41	.	ENSMUSG00000077527	ProperStrand	29	1	-6.1297
chr14	37692189	37692279	protein_coding	Gcap14	exon	ENSMUSG00000058690	ProperStrand	10	chr10	23505200	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	1	-4.3364
chr11	88843295	88843330	protein_coding	Coil	exon	ENSMUSG00000033983	ProperStrand	9	chr1	162967515	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-7.2161
chr1	63196538	63196575	protein_coding	Ndufs1	exon	ENSMUSG00000025968	ProperStrand	14	chr5	121655016	121655099	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-6.5960
chr7	119934438	119934484	protein_coding	Tead1	intron	ENSMUSG00000055320	ProperStrand	217	chr10	107800757	107800857	snoRNA	ENSMUSG00000065653_SNORA38	.	ENSMUSG00000065653	ProperStrand	826	1	-5.5313
chr17	51485515	51485533	LTR	RMER17B	ERVK	chr17RMER17B51484873	NonProperStrand	1	chr11	62416951	62416974	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-inf
chr4	108278918	108278934	protein_coding	Orc1	exon	ENSMUSG00000028587	ProperStrand	161	chr8	32260343	32260425	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-2.8073
chrX	7752870	7752886	protein_coding	Tbc1d25	exon	ENSMUSG00000039201	ProperStrand	126	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	1	-7.4460
chr17	23945118	23959555	protein_coding	Srrm2	utr3	ENSMUSG00000039218	ProperStrand	521	chr16	23111373	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	9	-0.8396
chr11	78021265	78021601	protein_coding	Supt6h	exon	ENSMUSG00000002052	ProperStrand	119	chr9	78326542	78326604	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-4.9962
chr2	27388512	27388533	protein_coding	Wdr5	exon	ENSMUSG00000026917	ProperStrand	81	chr7	117166819	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-4.2423
chr15	79358711	79358740	protein_coding	Ddx17	utr3	ENSMUSG00000055065	ProperStrand	140	chr19	8799831	8799898	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-3.3520
chr1	135611647	135611731	protein_coding	Atp2b4	exon	ENSMUSG00000026463	ProperStrand	42	chr1	162968442	162968487	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-6.7858
chr13	23830677	23830776	protein_coding	Hist1h1c	utr5	ENSMUSG00000036181	NonProperStrand	6	chr16	57391757	57391789	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	1	-15.0491
chr2	112102586	112102618	protein_coding	Nop10	utr3	ENSMUSG00000027133	ProperStrand	10	chr16	23111389	23111506	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-10.9079
chr8	25920545	25921169	protein_coding	Adam5	exon	ENSMUSG00000031554	ProperStrand	49	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.6485
chr2	25563070	25563086	antisense	A230005M16Rik	.	ENSMUSG00000087612	ProperStrand	103	chr3	123210931	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-1.2528
chr12	77811472	77811488	protein_coding	Spnb1	utr5	ENSMUSG00000021061	NonProperStrand	37	chr8	4329742	4329775	protein_coding	Ccl25	intron	ENSMUSG00000023235	ProperStrand	10	1	-17.6667
chr4	75094306	75094322	LINE	Lx9	L1	chr4Lx975094037	ProperStrand	41	chr4	116828379	116828453	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-9.1472
chr17	56209205	56209279	protein_coding-noncoding	Ubxn6	utr3	ENSMUSG00000019578	ProperStrand	4	chr18	35716685	35716763	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	3	-18.4806
chr18	80909380	80909396	protein_coding	Nfatc1	exon	ENSMUSG00000033016	ProperStrand	35	chr11	97643019	97643079	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.4316
chr6	29368026	29368048	protein_coding	Ccdc136	exon	ENSMUSG00000029769	ProperStrand	19	chr16	33625643	33625662	protein_coding	Slc12a8	intron	ENSMUSG00000035506	ProperStrand	52	1	-15.9226
chr16	15770080	15772118	protein_coding	Prkdc	exon	ENSMUSG00000022672	ProperStrand	22	chr16	23110902	23110958	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.8207
chr8	87083464	87083480	protein_coding	Cacna1a	exon	ENSMUSG00000034656	NonProperStrand	37	chr9	15119630	15119694	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.4975
chr7	52275883	52276471	protein_coding	Rras	exon	ENSMUSG00000038387	ProperStrand	6	chr11	116938693	116938749	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	1	-10.8898
chr5	122911626	122911707	protein_coding	Atp2a2	exon	ENSMUSG00000029467	ProperStrand	166	chr17	47824182	47824857	protein_coding	Tomm6	exon	ENSMUSG00000033475	ProperStrand	5	1	-16.4421
chr4	55044777	55044794	protein_coding	Zfp462	intron	ENSMUSG00000060206	NonProperStrand	5	chr11	62418013	62418044	snoRNA	ENSMUSG00000077457_Snord65	.	ENSMUSG00000077457	ProperStrand	2963	1	-10.6776
chr10	72123856	72123885	protein_coding	Zwint	intron	ENSMUSG00000019923	ProperStrand	22	chr16	23111743	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	3	-9.1722
chr16	37882963	37882979	protein_coding	Lrrc58	utr3	ENSMUSG00000034158	NonProperStrand	45	chr2	158185575	158185666	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	3	-15.9275
chr10	30320342	30320358	protein_coding	Trmt11	intron	ENSMUSG00000019792	NonProperStrand	26	chr1	162968441	162968467	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-7.7477
chr17	45705198	45705278	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr5	150025385	150025475	protein_coding	Uspl1	exon	ENSMUSG00000041264	ProperStrand	20	1	-8.9395
chr2	29954335	29955905	protein_coding	Zer1	exon	ENSMUSG00000039686	ProperStrand	31	chr8	32260335	32260400	snoRNA	ENSMUSG00000088252_Snord13	.	ENSMUSG00000088252	ProperStrand	4796	1	-5.9195
chr7	117189863	117189933	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr2	91436264	91436335	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	2	-2.1158
chr2	90524280	90524333	protein_coding	Nup160	intron	ENSMUSG00000051329	ProperStrand	49	chr11	99885311	99885327	protein_coding	Krt33b	exon	ENSMUSG00000057723	NonProperStrand	352	1	-10.1763
chr10	86153852	86154452	protein_coding	Hsp90b1	exon	ENSMUSG00000020048	ProperStrand	396	chr17	32453268	32453285	protein_coding	Akap8	exon	ENSMUSG00000024045	ProperStrand	339	5	-20.5790
chr7	147296531	147297629	protein_coding	Echs1	exon	ENSMUSG00000025465	ProperStrand	10	chr16	23111394	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-10.9079
chr7	117695614	117695714	protein_coding	Sbf2	intron	ENSMUSG00000038371	ProperStrand	17	chr18	35716811	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.4666
chr2	11699705	11699795	protein_coding-noncoding	Ankrd16	utr5	ENSMUSG00000047909	NonProperStrand	1	chr2	11699825	11699915	protein_coding	Ankrd16	intron	ENSMUSG00000047909	NonProperStrand	2	1	-inf
chr17	71390013	71390033	protein_coding	Myom1	intron	ENSMUSG00000024049	NonProperStrand	3	chr4	34817246	34817279	protein_coding	Zfp292	intron	ENSMUSG00000039967	ProperStrand	45	1	-inf
chr11	102964130	102964147	protein_coding	Acbd4	utr5	ENSMUSG00000056938	ProperStrand	20	chr4	131908689	131908751	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-3.0012
chr13	51743580	51743615	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	chr16	43886794	43886864	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	2	-3.5895
chr2	145077958	145209256	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	chr12	110918158	110918190	snoRNA	ENSMUSG00000065749_AF357428	.	ENSMUSG00000065749	ProperStrand	218	1	-5.1837
chr19	22974441	22974458	protein_coding	Trpm3	intron	ENSMUSG00000052387	NonProperStrand	16	chr4	131908383	131908442	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-3.6705
chr17	28465808	28465913	protein_coding	Rpl10a	exon	ENSMUSG00000037805	ProperStrand	121	chr4	33335115	33335215	protein_coding	Pnrc1	exon	ENSMUSG00000040128	ProperStrand	27	1	-13.5210
chr17	34136756	34136797	protein_coding	H2-K1	exon	ENSMUSG00000061232	ProperStrand	4	chr4	57706987	57707003	protein_coding	Palm2	intron	ENSMUSG00000090053	NonProperStrand	187	1	-16.7742
chr10	90483516	90486494	protein_coding	Apaf1	exon	ENSMUSG00000019979	ProperStrand	27	chr7	116663634	116663724	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	4	-13.0763
chr2	26494702	26494842	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	chr3	123210851	123210985	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	147	-7.4322
chr11	116165245	116165266	protein_coding	Exoc7	intron	ENSMUSG00000020792	ProperStrand	24	chr16	23110896	23110956	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-2.6072
chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	chr5	115939542	115939584	snRNA	ENSMUSG00000075998_U4	.	ENSMUSG00000075998	ProperStrand	916	1	-1.9576
chr14	31826494	31826510	protein_coding	Gnl3	exon	ENSMUSG00000042354	NonProperStrand	59	chr1	162967492	162967540	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-3.5053
chr16	89802197	89802287	protein_coding	Tiam1	intron	ENSMUSG00000002489	ProperStrand	80	chr2	174160735	174160815	protein_coding	Gnas	intron	ENSMUSG00000027523	ProperStrand	41	1	-13.5089
chr16	23111371	23111388	protein_coding-noncoding	Eif4a2	utr5	ENSMUSG00000022884	ProperStrand	514	chr13	34436854	34436870	protein_coding	Slc22a23	utr5	ENSMUSG00000038267	ProperStrand	95	1	-8.0946
chrX	71517822	71517955	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	chr19	8799832	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	5	-1.7510
chr4	86503057	86503127	protein_coding-noncoding	Rps6	utr3	ENSMUSG00000028495	ProperStrand	4	chr16	23110969	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.6489
chr2	144097020	144097037	protein_coding	8430406I07Rik	utr5	ENSMUSG00000027424	ProperStrand	43	chrX	166424957	166425008	protein_coding	Mid1	intron	ENSMUSG00000035299	ProperStrand	209	1	-11.4824
chr4	117769740	117769840	protein_coding	St3gal3	intron	ENSMUSG00000028538	ProperStrand	8	chr16	23111451	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	2	-8.1684
chr8	96697078	96697269	protein_coding	Mt2	exon	ENSMUSG00000031762	ProperStrand	71	chr4	56910528	56910618	snoRNA	ENSMUSG00000077170_SNORA43	.	ENSMUSG00000077170	ProperStrand	2235	13	-20.7909
chr15	99548653	99548669	protein_coding	Gpd1	exon	ENSMUSG00000023019	ProperStrand	40	chr1	88252838	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-7.4480
chr19	9082675	9082692	protein_coding	Ahnak	exon	ENSMUSG00000069833	ProperStrand	103	chr5	111121066	111121174	snoRNA	ENSMUSG00000077254_SNORA49	.	ENSMUSG00000077254	ProperStrand	1891	10	-21.8941
chr6	30162058	30165037	protein_coding	Ube2h	utr3	ENSMUSG00000039159	ProperStrand	96	chr3	123210891	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	3	-4.0437
chrX	72214248	72214264	protein_coding-noncoding	Gab3	utr3	ENSMUSG00000032750	ProperStrand	420	chr7	67123692	67123728	snoRNA	ENSMUSG00000077191_Snord64	.	ENSMUSG00000077191	ProperStrand	395	1	-5.6807
chr11	71978593	71978611	protein_coding	4933427D14Rik	intron	ENSMUSG00000020807	NonProperStrand	6	chr3	68889227	68889265	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	2	-12.8230
chr14	65372868	65372890	snoRNA	ENSMUSG00000064442_SNORA36	.	ENSMUSG00000064442	ProperStrand	296	chr5	121655016	121655116	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-1.1245
chr9	57104326	57104426	protein_coding	1700017B05Rik	exon	ENSMUSG00000032300	ProperStrand	22	chr16	23111754	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-3.6613
chr2	26281043	26281322	protein_coding	Sec16a	exon	ENSMUSG00000026924	ProperStrand	86	chr19	8799588	8799646	snoRNA	ENSMUSG00000065378_SNORD29	.	ENSMUSG00000065378	ProperStrand	1597	1	-6.0556
chr5	31375029	31379146	protein_coding	Cad	exon	ENSMUSG00000013629	ProperStrand	260	chr5	130300420	130300540	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	2	-1.0906
chr1	105634761	105634778	SINE	B4A	B4	chr1B4A105634665	ProperStrand	11	chr17	35291483	35291772	protein_coding	Prrc2a	exon	ENSMUSG00000024393	ProperStrand	315	1	-13.4523
chr11	80068348	80068364	protein_coding	Rhot1	exon	ENSMUSG00000017686	ProperStrand	40	chr7	116663640	116663759	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-3.2294
chr5	120133106	120133175	protein_coding	Tbx3	utr3	ENSMUSG00000018604	ProperStrand	87	chr3	96528218	96528308	snoRNA	ENSMUSG00000065669_SNORA5	.	ENSMUSG00000065669	ProperStrand	180	1	-10.3626
chr16	11753769	11753786	protein_coding	Snx29	intron	ENSMUSG00000071669	NonProperStrand	38	chr14	31827478	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	1	-7.8571
chr2	155651523	155651575	protein_coding	Eif6	utr3	ENSMUSG00000027613	ProperStrand	42	chr4	155033606	155033790	protein_coding	Mib2	exon	ENSMUSG00000029060	ProperStrand	21	4	-19.4448
chr9	31164912	31166593	protein_coding	Prdm10	exon	ENSMUSG00000042496	NonProperStrand	6	chr7	117189939	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	3	-18.1458
chr1	191058376	191058394	protein_coding	Kcnk2	intron	ENSMUSG00000037624	ProperStrand	56	chr16	23111396	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.3551
chr8	26678633	26678688	protein_coding-noncoding	Fgfr1	utr5	ENSMUSG00000031565	ProperStrand	2	chr18	35716809	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-9.2832
chr2	38857281	38859654	protein_coding	Rpl35	exon	ENSMUSG00000062997	ProperStrand	68	chr4	131908236	131908273	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-1.2431
chr17	24557184	24557218	protein_coding	Rnps1	exon	ENSMUSG00000034681	ProperStrand	40	chr4	151864157	151864175	protein_coding	Nphp4	intron	ENSMUSG00000039577	ProperStrand	33	1	-15.3274
chr1	155287312	155287355	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	chr19	8798484	8798552	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-1.4019
chr7	86418641	86418657	protein_coding	Abhd2	intron	ENSMUSG00000039202	NonProperStrand	12	chr16	23111451	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.0123
chr18	10052133	10052153	LTR	MMERGLN-int	ERV1	chr18MMERGLN-int10052132	NonProperStrand	572	chr3	85448965	85456213	protein_coding	Pet112l	exon	ENSMUSG00000028085	ProperStrand	81	1	-8.2004
chr8	100034840	100034857	LTR	RLTR20A	ERVK	chr8RLTR20A100034580	NonProperStrand	1	chr16	57391643	57391743	protein_coding	Filip1l	intron	ENSMUSG00000043336	ProperStrand	269	1	-inf
chr2	25079509	25079554	protein_coding	Tubb4b	exon	ENSMUSG00000036752	NonProperStrand	1	chr4	122970403	122970503	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	NonProperStrand	6	1	-inf
chr17	56459849	56459893	protein_coding	Uhrf1	exon	ENSMUSG00000001228	ProperStrand	229	chr16	43886794	43886849	snoRNA	ENSMUSG00000088806_SNORA84	.	ENSMUSG00000088806	ProperStrand	824	1	-5.4315
chr17	34324656	34324673	protein_coding	Psmb9	utr5	ENSMUSG00000024337	ProperStrand	60	chr10	90581161	90581218	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-4.8072
chr15	84026176	84026276	protein_coding	Samm50	exon	ENSMUSG00000022437	ProperStrand	51	chr18	35102297	35102340	snoRNA	ENSMUSG00000065904_SNORD63	.	ENSMUSG00000065904	ProperStrand	1747	1	-6.9127
chr12	111904170	111904192	protein_coding	Dync1h1	exon	ENSMUSG00000018707	ProperStrand	648	chr16	4718928	4719027	protein_coding	Nmral1	utr5	ENSMUSG00000063445	ProperStrand	10	1	-12.2132
chr17	66798457	66798473	protein_coding	1110012J17Rik	exon	ENSMUSG00000052105	NonProperStrand	38	chr1	89673567	89673627	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	1	-4.1129
chr9	82723543	82723559	protein_coding	Irak1bp1	utr5	ENSMUSG00000032251	NonProperStrand	16	chr9	15119287	15119365	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	2	-12.4619
chr12	32172315	32172405	protein_coding	Cbll1	exon	ENSMUSG00000020659	ProperStrand	19	chr19	8800369	8800449	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-5.7475
chr4	116300005	116300029	protein_coding	Nasp	utr5	ENSMUSG00000028693	ProperStrand	64	chr7	29073210	29073330	protein_coding	BC089491	exon	ENSMUSG00000046750	ProperStrand	62	1	-13.1194
chr18	34797101	34800813	protein_coding	Cdc23	exon	ENSMUSG00000024370	ProperStrand	48	chr6	87004665	87006162	protein_coding	Gfpt1	exon	ENSMUSG00000029992	ProperStrand	22	1	-15.7798
chr19	31005116	31005133	protein_coding	Prkg1	intron	ENSMUSG00000052920	ProperStrand	32	chr11	69481405	69481478	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-4.3754
chr4	43188871	43188941	protein_coding	Unc13b	intron	ENSMUSG00000028456	ProperStrand	29	chr16	23110958	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0921
chr8	98284012	98284042	protein_coding	Cnot1	exon	ENSMUSG00000036550	ProperStrand	315	chr8	86197597	86201502	protein_coding	Pkn1	exon	ENSMUSG00000057672	ProperStrand	36	1	-11.0208
chr2	124906400	124906417	protein_coding	Slc24a5	exon	ENSMUSG00000035183	NonProperStrand	3	chr16	44225761	44225778	protein_coding	Gm608	utr3	ENSMUSG00000068284	NonProperStrand	29	1	-inf
chr4	131865464	131865529	lincRNA	Snhg12	intron	ENSMUSG00000086290	ProperStrand	178	chr9	118468261	118468361	protein_coding	Golga4	exon	ENSMUSG00000038708	ProperStrand	95	1	-10.2084
chr5	136707645	136707662	protein_coding	Sh2b2	exon	ENSMUSG00000005057	NonProperStrand	101	chr9	120038000	120038053	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	2	-6.2900
chr10	5992231	5992331	protein_coding	Akap12	exon	ENSMUSG00000038587	NonProperStrand	3	chr19	8963026	8963064	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	1	-16.5872
chr2	165904622	165904638	protein_coding	Sulf2	exon	ENSMUSG00000006800	ProperStrand	171	chr1	162965531	162965596	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-1.5292
chr9	60076211	60076227	protein_coding	Thsd4	intron	ENSMUSG00000032289	ProperStrand	20	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-9.9579
chr13	25029596	25029613	lincRNA	9330162012Rik	intron	ENSMUSG00000086448	ProperStrand	13	chr5	108927721	108927782	protein_coding	Pcgf3	intron	ENSMUSG00000033623	ProperStrand	17	2	-21.7623
chr13	22099088	22099117	protein_coding	Prss16	exon	ENSMUSG00000006179	NonProperStrand	5	chr7	52382234	52382285	snoRNA	ENSMUSG00000065628_Snord33	.	ENSMUSG00000065628	ProperStrand	742	2	-18.8031
chr19	41993039	41993083	protein_coding	Pgam1	utr3	ENSMUSG00000011752	ProperStrand	124	chr7	29136557	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-1.2463
chr1	155287307	155287355	snoRNA	ENSMUSG00000064435_SNORA4	.	ENSMUSG00000064435	ProperStrand	263	chr18	35714173	35714273	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-1.0630
chr5	122691914	122691930	protein_coding	Hvcn1	utr3	ENSMUSG00000064267	ProperStrand	182	chr1	9932587	9932626	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-5.5395
chr2	30745669	30745685	protein_coding	Ptges	utr3	ENSMUSG00000050737	ProperStrand	5	chr7	117189864	117189922	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-11.3452
chr9	108594650	108594669	protein_coding	Prkar2a	utr5	ENSMUSG00000032601	ProperStrand	43	chr9	15119631	15119675	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.2218
chr8	86603848	86604058	protein_coding	Rfx1	exon	ENSMUSG00000031706	ProperStrand	20	chr18	33954912	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-5.6191
chrX	71517855	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	chr2	166888977	166889003	snoRNA	ENSMUSG00000077515_SNORD12	.	ENSMUSG00000077515	ProperStrand	191	3	-10.3171
chr10	82456766	82456784	protein_coding	Chst11	intron	ENSMUSG00000034612	ProperStrand	170	chr14	76247752	76247840	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-2.3013
chr11	80965641	80965658	protein_coding	Accn1	exon	ENSMUSG00000020704	NonProperStrand	228	chr17	35088957	35089021	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-3.3282
chr2	31924012	31924028	protein_coding	Fam78a	utr3	ENSMUSG00000050592	NonProperStrand	340	chr19	8800085	8800143	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-4.2239
chr2	26766632	26767066	protein_coding	Rpl7a	exon	ENSMUSG00000062647	ProperStrand	234	chr7	117189867	117190053	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	5	-6.7358
chr4	124732513	124732565	protein_coding	Gnl2	exon	ENSMUSG00000028869	ProperStrand	23	chr16	23110959	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-4.3078
chr2	90235298	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	30956623	30956640	protein_coding	Fnbp1	intron	ENSMUSG00000075415	NonProperStrand	10	1	-8.0457
chr2	69361228	69361308	protein_coding	Lrp2	exon	ENSMUSG00000027070	ProperStrand	35	chr9	15119676	15119766	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-3.6006
chr7	30074412	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	chr11	62416967	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-3.3023
chr5	147279814	147279882	protein_coding	Wasf3	exon	ENSMUSG00000029636	ProperStrand	32	chr9	99483993	99484009	protein_coding	Dbr1	exon	ENSMUSG00000032469	ProperStrand	162	1	-12.5905
chr3	89070915	89070977	protein_coding	Dpm3	utr3	ENSMUSG00000042737	ProperStrand	3	chr4	131865855	131865915	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	1	-7.6896
chr16	90752210	90752287	protein_coding	Urb1	utr3	ENSMUSG00000039929	ProperStrand	71	chr4	63389602	63389618	protein_coding	Tnfsf15	utr3	ENSMUSG00000050395	NonProperStrand	121	1	-11.5659
chr4	102787599	102787617	protein_coding	Mier1	intron	ENSMUSG00000028522	ProperStrand	7	chr19	8963116	8963177	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-6.3961
chr11	6428037	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	chr2	26494703	26494841	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	58	-0.7484
chr18	82662186	82662202	protein_coding	Mbp	intron	ENSMUSG00000041607	NonProperStrand	185	chr17	35087894	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-3.0863
chr7	53063776	53065504	protein_coding	Cyth2	exon	ENSMUSG00000003269	ProperStrand	15	chr12	106269284	106269384	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	2	-11.1536
chr11	97489578	97489595	protein_coding	E130012A19Rik	exon	ENSMUSG00000043439	NonProperStrand	110	chr9	15118321	15118377	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-2.3948
chr9	17362991	17363071	LTR	MTC	MaLR	chr9MTC17362796	ProperStrand	1	chr7	148634752	148634842	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-inf
chr1	75192490	75192507	processed_transcript	Ankzf1	.	ENSMUSG00000026199	ProperStrand	69	chr17	23955822	23955838	protein_coding	Srrm2	utr3	ENSMUSG00000039218	NonProperStrand	150	1	-11.1933
chr11	33052607	33052697	protein_coding	Npm1	utr3	ENSMUSG00000057113	ProperStrand	352	chr14	33005158	33005238	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	1	-1.0715
chr2	66980761	66980778	LTR	RMER19B	ERVK	chr2RMER19B66980263	ProperStrand	35	chr7	26527991	26528031	protein_coding	Hnrnpul1	exon	ENSMUSG00000040725	ProperStrand	84	1	-13.7311
mmu-miR-3963	4	19	miRNA	mmu-miR-3963	.	mmu-miR-3963	ProperStrand	1955	chr17	25080829	25080929	protein_coding	Hn1l	utr3	ENSMUSG00000024165	ProperStrand	45	4	-inf
chr18	41356147	41356185	miRNA	Mir5097	dead	ENSMUSG00000093361	ProperStrand	221	chr3	68889026	68889146	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-1.1558
chr10	127525521	127525545	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr10	117227045	117227061	protein_coding	Nup107	exon	ENSMUSG00000052798	NonProperStrand	66	1	-8.4755
chr7	38968492	38968508	protein_coding	1600014C10Rik	utr5	ENSMUSG00000054676	ProperStrand	635	chr15	79908963	79909019	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-1.3188
chr2	25563070	25563086	antisense	A230005M16Rik	.	ENSMUSG00000087612	ProperStrand	103	chr9	30899037	30899062	protein_coding	St14	exon	ENSMUSG00000031995	ProperStrand	90	1	-11.4127
chr9	65049540	65049610	snRNA	ENSMUSG00000075930_U5	.	ENSMUSG00000075930	NonProperStrand	3	chr9	120038563	120038663	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	NonProperStrand	28	1	-inf
chr5	140783691	140786579	protein_coding	Mad1l1	exon	ENSMUSG00000029554	ProperStrand	69	chr11	69483136	69483210	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	2	-3.9608
chr8	28383948	28385862	protein_coding	Eif4ebp1	utr3	ENSMUSG00000031490	ProperStrand	22	chr16	23111452	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-7.5258
chr5	145532202	145532302	protein_coding	Trrap	intron	ENSMUSG00000045482	ProperStrand	399	chr1	162968445	162968509	snoRNA	ENSMUSG00000065228_SNORD81	.	ENSMUSG00000065228	ProperStrand	2267	1	-2.5325
chr2	91460338	91460461	protein_coding	Ckap5	utr3	ENSMUSG00000040549	ProperStrand	53	chr7	118219575	118219591	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	1	-4.4064
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr14	55476645	55476661	protein_coding	Homez	exon	ENSMUSG00000057156	NonProperStrand	127	1	-7.0989
chr9	50816824	50816842	protein_coding	Sik2	intron	ENSMUSG00000037112	NonProperStrand	127	chr9	120039578	120039678	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-2.0239
chr17	46380988	46381038	protein_coding	Polr1c	utr3	ENSMUSG00000067148	ProperStrand	58	chr7	116664813	116664913	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.6073
chr4	132063588	132063668	antisense	Gm12981	.	ENSMUSG00000086997	ProperStrand	10	chr9	106761119	106761209	protein_coding	Vprbp	exon	ENSMUSG00000040325	ProperStrand	35	1	-18.2018
chr16	91656081	91656181	protein_coding	Son	exon	ENSMUSG00000022961	ProperStrand	59	chr7	116664817	116664857	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-2.5778
chr9	59523497	59525893	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr2	22444877	22444894	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	3	-5.4920
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr12	60141398	60141509	snRNA	ENSMUSG00000065232_U2	.	ENSMUSG00000065232	ProperStrand	1547	1	-3.0684
chr15	81725813	81729578	protein_coding	Aco2	exon	ENSMUSG00000022477	ProperStrand	237	chr1	162965978	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	1	-1.3188
chr18	34968372	34968497	protein_coding	Kdm3b	exon	ENSMUSG00000038773	ProperStrand	80	chr15	34370545	34370565	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-3.0266
chr11	116533865	116533890	snoRNA	ENSMUSG00000065640_Snord1c	.	ENSMUSG00000065640	ProperStrand	373	chr14	33005094	33005139	snoRNA	ENSMUSG00000077611_SNORA74	.	ENSMUSG00000077611	ProperStrand	6718	2	-1.9703
chr15	102364113	102364213	protein_coding	Atf7	utr3	ENSMUSG00000052414	ProperStrand	14	chr7	52381973	52382013	snoRNA	ENSMUSG00000065878_Snord34	.	ENSMUSG00000065878	ProperStrand	1642	1	-9.6541
chr3	96654255	96654271	protein_coding	Pdzk1	exon	ENSMUSG00000038298	ProperStrand	101	chr16	23110526	23110563	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.6229
chr4	68607688	68607705	protein_coding	Dbc1	intron	ENSMUSG00000028351	ProperStrand	78	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-7.2169
chr9	95524997	95525037	antisense	Gm16126	.	ENSMUSG00000086585	NonProperStrand	229	chr2	32818840	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-2.9552
chr17	10474856	10474956	protein_coding	Qk	intron	ENSMUSG00000062078	ProperStrand	63	chr11	77995188	77995228	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-6.0865
chrX	71517821	71517955	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	chr8	98269957	98270014	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	3	-1.2221
chr8	124117005	124117095	protein_coding	Map1lc3b	intron	ENSMUSG00000031812	ProperStrand	57	chr16	23111448	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.3302
chr16	3982980	3983070	protein_coding-noncoding	Slx4	utr3	ENSMUSG00000039738	ProperStrand	2	chr16	3982641	3982731	protein_coding	Slx4	intron	ENSMUSG00000039738	ProperStrand	18	1	-21.6032
chr7	13516186	13516203	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr14	52829460	52829520	snoRNA	ENSMUSG00000093044_Snord8	.	ENSMUSG00000093044	ProperStrand	773	2	-6.2263
chr1	88250314	88250333	protein_coding	Ncl	exon	ENSMUSG00000026234	ProperStrand	1184	chr8	112363200	112363275	snoRNA	ENSMUSG00000077549_Snord71	.	ENSMUSG00000077549	ProperStrand	196	3	-11.8177
chr19	5274282	5274298	protein_coding	Sf3b2	utr3	ENSMUSG00000024853	ProperStrand	102	chr18	35714145	35714219	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-2.5008
chr13	17811319	17811372	protein_coding	Cdk13	exon	ENSMUSG00000041297	ProperStrand	29	chr7	148634715	148634805	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	3	-12.6592
chr2	172746081	172746101	protein_coding	Bmp7	intron	ENSMUSG00000008999	ProperStrand	22	chr10	80644040	80644063	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	1	-8.1062
chr8	131246492	131250005	protein_coding	Itgb1	exon	ENSMUSG00000025809	ProperStrand	35	chr16	23111372	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	3	-5.7387
chr19	5493738	5493838	protein_coding	Cfl1	utr3	ENSMUSG00000056201	ProperStrand	88	chr2	166890552	166890579	snoRNA	ENSMUSG00000077565_SNORD12	.	ENSMUSG00000077565	ProperStrand	1070	1	-6.7963
chr15	72958760	72958860	protein_coding	Eif2c2	exon	ENSMUSG00000036698	ProperStrand	154	chr15	98350146	98350202	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	1	-3.0062
chr2	105660946	105661036	protein_coding	Elp4	intron	ENSMUSG00000027167	ProperStrand	11	chr3	123210896	123210976	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	1	-5.2109
chr17	32957268	32957284	lincRNA	Gm16684	intron	ENSMUSG00000085948	ProperStrand	43	chr4	56787460	56787594	protein_coding	Ikbkap	exon	ENSMUSG00000028431	ProperStrand	44	1	-14.6275
chr6	47975476	47975566	protein_coding	Zfp777	exon	ENSMUSG00000071477	ProperStrand	11	chr10	90581059	90581139	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	3	-18.3833
chr5	74489202	74489292	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr15	79908929	79908951	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	4	-0.7380
chr1	54361816	54370999	protein_coding	Ccdc150	exon	ENSMUSG00000025983	ProperStrand	56	chr9	118423324	118431677	protein_coding	Golga4	exon	ENSMUSG00000038708	ProperStrand	95	1	-12.5289
chr4	116827417	116827647	protein_coding	Rps8	exon	ENSMUSG00000047675	ProperStrand	262	chr6	52965701	52965718	protein_coding	Jazf1	intron	ENSMUSG00000063568	ProperStrand	43	1	-11.0301
chr15	73587398	73587423	protein_coding	Ptp4a3	utr3	ENSMUSG00000059895	ProperStrand	45	chr16	23111373	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	4	-6.7814
chrX	11634841	11634858	protein_coding	Bcor	exon	ENSMUSG00000040363	NonProperStrand	293	chr17	35299507	35299546	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-1.9343
chr6	38032072	38032938	protein_coding	Atp6v0a4	exon	ENSMUSG00000038600	ProperStrand	14	chr16	23110546	23110583	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-5.1866
chr1	172096762	172096779	protein_coding	Uap1	exon	ENSMUSG00000026670	NonProperStrand	3	chr5	91044781	91044798	protein_coding	Rassf6	intron	ENSMUSG00000029370	NonProperStrand	6	1	-inf
chr9	63536573	63536590	protein_coding	Smad3	intron	ENSMUSG00000032402	NonProperStrand	3	chr2	145077954	145209255	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	1	-14.0894
chr14	28272978	28272994	protein_coding	D14Abb1e	exon	ENSMUSG00000040651	ProperStrand	49	chr5	65780389	65780744	protein_coding	Rpl9	exon	ENSMUSG00000047215	ProperStrand	113	1	-12.4525
chr9	44445864	44445922	protein_coding	Ddx6	utr3	ENSMUSG00000032097	ProperStrand	59	chr2	26494708	26494800	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.1372
chr17	4082217	4082253	LINE	L1Md_A	L1	chr17L1Md_A4082095	ProperStrand	319	chr19	8800114	8800146	snoRNA	ENSMUSG00000065305_SNORD31	.	ENSMUSG00000065305	ProperStrand	1043	1	-4.3442
chr11	71856606	71856654	protein_coding	Fam64a	exon	ENSMUSG00000020808	ProperStrand	7	chr11	69483136	69483191	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	3	-15.7007
chr12	17552970	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	chr11	116938557	116938711	snoRNA	ENSMUSG00000088529_SCARNA16	.	ENSMUSG00000088529	ProperStrand	2176	4	-0.8839
chr9	98857516	98857532	protein_coding	Foxl2	utr3	ENSMUSG00000050397	NonProperStrand	2	chr3	68889026	68889126	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-10.5388
chr14	31826494	31826510	protein_coding	Gnl3	exon	ENSMUSG00000042354	NonProperStrand	59	chr1	20552541	20552558	protein_coding	Pkhd1	exon	ENSMUSG00000043760	NonProperStrand	49	1	-13.7591
chr19	8963052	8963152	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	NonProperStrand	290	chr7	116664844	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	NonProperStrand	12	1	-13.4400
chr6	35152148	35153995	protein_coding	Nup205	exon	ENSMUSG00000038759	ProperStrand	56	chr18	73693161	73693186	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-5.6591
chr7	130363534	130363557	protein_coding	Slc5a11	intron	ENSMUSG00000030769	ProperStrand	87	chr11	93315153	93315169	protein_coding	Car10	intron	ENSMUSG00000056158	ProperStrand	25	1	-14.3329
chr10	106857039	106857056	protein_coding	Lin7a	utr3	ENSMUSG00000019906	ProperStrand	1	chr2	22444893	22444915	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	1	-inf
chr9	110544350	110544366	protein_coding	Nbeal2	exon	ENSMUSG00000056724	ProperStrand	161	chr19	8799041	8799090	snoRNA	ENSMUSG00000065281_SNORD27	.	ENSMUSG00000065281	ProperStrand	2572	1	-3.9356
chr11	14961829	14961849	LINE	Lx	L1	chr11Lx14961726	ProperStrand	93	chr4	116826699	116826767	snoRNA	ENSMUSG00000064542_SNORD38	.	ENSMUSG00000064542	ProperStrand	1585	1	-5.9168
chr4	43505757	43505930	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr3	153574591	153574654	snoRNA	ENSMUSG00000065738_SNORD45	.	ENSMUSG00000065738	ProperStrand	369	6	-5.1499
chr14	70167519	70176056	protein_coding	Tnfrsf10b	exon	ENSMUSG00000022074	ProperStrand	57	chr16	23110874	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	4	-2.4727
chr18	78019010	78019774	protein_coding	Atp5a1	exon	ENSMUSG00000025428	ProperStrand	254	chr2	119122941	119122985	protein_coding	Vps18	exon	ENSMUSG00000034216	ProperStrand	21	1	-12.5470
chr1	153567344	153567434	protein_coding	Fam129a	utr3	ENSMUSG00000026483	ProperStrand	21	chr7	116664841	116664921	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-4.4850
chr19	38470512	38470530	protein_coding	Tmem20	utr5	ENSMUSG00000044026	NonProperStrand	23	chr1	9932550	9932614	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-9.6624
chr11	6428060	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	NonProperStrand	91	chr7	29136523	29136623	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	NonProperStrand	27	2	-20.1994
chr1	182733052	182733091	protein_coding	H3f3a	utr3	ENSMUSG00000060743	ProperStrand	46	chr2	158182156	158182191	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	ProperStrand	3948	1	-5.5203
chr2	80297373	80297389	LINE	L1MB8	L1	chr2L1MB880297262	ProperStrand	53	chr10	77432751	77432770	protein_coding	Trpm2	intron	ENSMUSG00000009292	NonProperStrand	23	1	-15.4887
chr15	78920073	78920163	protein_coding	Eif3l	exon	ENSMUSG00000033047	ProperStrand	81	chr16	23111394	23111474	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.8748
chr18	24665508	24665619	protein_coding	Rprd1a	exon	ENSMUSG00000040446	ProperStrand	21	chr17	24857716	24857775	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.2024
chr10	36716836	36716918	protein_coding	Hdac2	exon	ENSMUSG00000019777	ProperStrand	36	chr2	26768409	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-6.6110
chr3	104764495	104764511	protein_coding	Wnt2b	utr5	ENSMUSG00000027840	NonProperStrand	50	chr1	162965557	162965577	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-3.6110
chr14	78707828	78707845	protein_coding	Tnfsf11	utr5	ENSMUSG00000022015	ProperStrand	1	chr9	78326543	78326598	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	1	-inf
chr2	121004467	121009292	protein_coding	Tubgcp4	exon	ENSMUSG00000027263	ProperStrand	30	chr5	115597212	115597229	protein_coding	Mlec	utr3	ENSMUSG00000048578	NonProperStrand	25	1	-16.5178
chr17	24361005	24361092	protein_coding	Ccnf	exon	ENSMUSG00000072082	ProperStrand	149	chr7	117190029	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-1.7837
chr13	111188674	111188972	protein_coding	Plk2	exon	ENSMUSG00000021701	ProperStrand	14	chrX	71589886	71589907	protein_coding	Plxna3	utr3	ENSMUSG00000031398	ProperStrand	291	5	-inf
chr18	9992250	9992869	protein_coding	Thoc1	exon	ENSMUSG00000024287	ProperStrand	13	chr8	96704032	96704084	protein_coding	Mt1	exon	ENSMUSG00000031765	ProperStrand	92	2	-inf
chr7	30807604	30807704	protein_coding	Zfp568	exon	ENSMUSG00000074221	ProperStrand	110	chr7	116664812	116664870	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	18	-inf
chr19	6999468	6999486	protein_coding	1700019N12Rik	exon	ENSMUSG00000050623	ProperStrand	7	chr11	62416601	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-9.5351
chr6	108786745	108786761	protein_coding	Edem1	exon	ENSMUSG00000030104	ProperStrand	18	chr15	5068428	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	2	-13.5610
chr11	5180669	5180685	protein_coding	Znrf3	utr3	ENSMUSG00000041961	NonProperStrand	210	chr5	130300419	130300477	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-0.7075
chr10	39978350	39978440	snoRNA	ENSMUSG00000065870_U3	.	ENSMUSG00000065870	ProperStrand	3116	chr13	96102561	96102645	snoRNA	ENSMUSG00000077380_SNORA68	.	ENSMUSG00000077380	ProperStrand	51	1	-5.7780
chr2	104423391	104423408	LTR	RLTR28B	ERVL	chr2RLTR28B104423332	NonProperStrand	13	chr11	106362637	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-10.5079
chr11	79987895	79987912	antisense	Gm11206	.	ENSMUSG00000086507	ProperStrand	8	chr11	69483195	69483268	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-6.3191
chr6	86731276	86731292	protein_coding	Anxa4	intron	ENSMUSG00000029994	ProperStrand	47	chr17	24857781	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-2.7154
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr14	56159295	56159311	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	1	-4.6133
chr9	46741182	46741203	LINE	L2	L2	chr9L246741115	NonProperStrand	1	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	1	-inf
chr5	100855902	100855944	lincRNA	5430416N02Rik	intron	ENSMUSG00000084877	ProperStrand	1705	chr10	82344469	82344521	protein_coding	Txnrd1	exon	ENSMUSG00000020250	ProperStrand	47	1	-7.1234
chr10	127562337	127562419	protein_coding	Baz2a	exon	ENSMUSG00000040054	ProperStrand	274	chr14	63287574	63287615	protein_coding	Serpine3	intron	ENSMUSG00000091155	ProperStrand	210	1	-7.7653
chr14	8748543	8749723	protein_coding	Flnb	exon	ENSMUSG00000025278	ProperStrand	124	chr1	89673651	89673731	snoRNA	ENSMUSG00000087968_SCARNA6	.	ENSMUSG00000087968	ProperStrand	9992	3	-5.5260
chr11	60657678	60657766	protein_coding	Dhrs7b	exon	ENSMUSG00000042569	ProperStrand	5	chr18	33954920	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-8.5187
chr2	14996595	14996638	protein_coding	Arl5b	exon	ENSMUSG00000017418	ProperStrand	55	chr7	116663659	116663759	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.6620
chr16	15636157	15636285	protein_coding	Mcm4	exon	ENSMUSG00000022673	ProperStrand	51	chr4	131908689	131908708	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-1.4523
chr4	132394364	132394449	snoRNA	ENSMUSG00000088990_SCARNA1	.	ENSMUSG00000088990	ProperStrand	483	chr5	74489595	74489644	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	8	-8.8858
chr1	134212897	134212914	protein_coding	Nuak2	exon	ENSMUSG00000009772	NonProperStrand	19	chr9	15119630	15119713	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-4.7702
chr2	166327592	166327610	LTR	RLTR15	ERVK	chr2RLTR15166327272	NonProperStrand	1	chr15	99548653	99548669	protein_coding	Gpd1	exon	ENSMUSG00000023019	ProperStrand	40	1	-inf
chr8	12757419	12757436	protein_coding	Atp11a	intron	ENSMUSG00000031441	ProperStrand	635	chr11	62416953	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-1.7475
chr2	130002854	130004996	protein_coding	Snrpb	exon	ENSMUSG00000027404	ProperStrand	21	chr17	13112491	13112581	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-6.6462
chr2	63936034	63936054	protein_coding	Fign	utr5	ENSMUSG00000075324	NonProperStrand	918	chrX	71517821	71517959	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	6	-10.4878
chr1	12658045	12658135	lincRNA	Gm17644	exon	ENSMUSG00000066918	ProperStrand	10	chr12	78511161	78511241	protein_coding	Fut8	intron	ENSMUSG00000021065	ProperStrand	3	1	-inf
chr16	44139954	44139973	protein_coding	Naa50	utr5	ENSMUSG00000022698	ProperStrand	56	chr7	87226771	87226880	protein_coding	Zfp710	exon	ENSMUSG00000048897	ProperStrand	229	1	-10.7665
chr11	4961160	4961217	protein_coding	Gas2l1	exon	ENSMUSG00000034201	ProperStrand	33	chr15	34370575	34370675	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-7.7841
chr11	100818532	100818673	protein_coding	Ptrf	utr3	ENSMUSG00000004044	NonProperStrand	2	chr3	35991167	35991183	protein_coding	Acad9	utr3	ENSMUSG00000027710	NonProperStrand	5	2	-inf
chr14	59842038	59842135	protein_coding	Rcbtb1	exon	ENSMUSG00000035469	ProperStrand	39	chr4	141460921	141460937	protein_coding	Fhad1	exon	ENSMUSG00000051435	ProperStrand	8	1	-17.6839
chr15	82686706	82686732	protein_coding	Tcf20	exon	ENSMUSG00000041852	ProperStrand	658	chr12	55797772	55797862	snRNA	ENSMUSG00000075736_U1	.	ENSMUSG00000075736	ProperStrand	997	1	-3.0929
chr7	118194984	118195068	protein_coding	Ctr9	exon	ENSMUSG00000005609	ProperStrand	21	chr16	23111777	23111833	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	6	-19.5539
chr5	92050646	92050664	protein_coding	Parm1	intron	ENSMUSG00000034981	ProperStrand	2	chr1	162967490	162967535	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-10.7784
chr19	6401815	6402513	protein_coding	Rasgrp2	exon	ENSMUSG00000032946	ProperStrand	6	chr2	29013636	29013716	protein_coding	Setx	exon	ENSMUSG00000043535	ProperStrand	187	1	-15.7686
chr8	74135145	74135245	protein_coding	Glt25d1	exon	ENSMUSG00000034807	ProperStrand	36	chr19	8799838	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	1	-5.9467
chr2	28695610	28695627	protein_coding	Gtf3c4	utr5	ENSMUSG00000035666	NonProperStrand	16	chr2	130101241	130101309	snoRNA	ENSMUSG00000080610_Snord110	.	ENSMUSG00000080610	ProperStrand	1746	1	-9.2562
chr9	64143850	64143878	protein_coding	Tipin	intron	ENSMUSG00000032397	ProperStrand	32	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-9.4439
chr4	134359501	134359524	protein_coding	Tmem57	utr3	ENSMUSG00000028826	NonProperStrand	10	chrX	84483703	84483733	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-11.9088
chr4	32802678	32802739	protein_coding	Mdn1	exon	ENSMUSG00000058006	ProperStrand	184	chr4	131865855	131865945	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	2	-0.9173
chr13	19194749	19194765	protein_coding	Amph	exon	ENSMUSG00000021314	NonProperStrand	247	chr10	90581037	90581156	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-2.2361
chr9	15119630	15119969	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	chr1	162967489	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	118	-inf
chr5	46095024	46095124	protein_coding	Lcorl	intron	ENSMUSG00000015882	NonProperStrand	6	chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	1	-13.6598
chr9	59519410	59519500	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr6	73225280	73225357	protein_coding	Suclg1	exon	ENSMUSG00000052738	ProperStrand	12	1	-10.4464
chr14	106506637	106506686	protein_coding	Trim52	exon	ENSMUSG00000022113	ProperStrand	7	chr11	97642948	97643038	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-6.6269
chr10	19886574	19886591	protein_coding	Mtap7	intron	ENSMUSG00000019996	NonProperStrand	16	chr6	71444109	71444129	protein_coding	Rnf103	utr5	ENSMUSG00000052656	NonProperStrand	11	1	-18.9924
chr5	115574353	115574406	protein_coding	Unc119b	utr3	ENSMUSG00000046562	ProperStrand	20	chr17	24857719	24857809	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.2966
chr3	102866348	102866423	protein_coding	Nras	exon	ENSMUSG00000027852	ProperStrand	8	chr4	131908821	131908895	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.7736
chr8	72775690	72775744	protein_coding	Sugp2	exon	ENSMUSG00000036054	ProperStrand	33	chr15	92172139	92172158	protein_coding	Cntn1	utr3	ENSMUSG00000055022	NonProperStrand	16	1	-17.0731
chr15	102840180	102840198	protein_coding	Hoxc6	utr5	ENSMUSG00000001661	NonProperStrand	1	chr1	162967518	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-inf
chrX	54499648	54502153	protein_coding	Arhgef6	exon	ENSMUSG00000031133	ProperStrand	20	chr3	95980331	95980358	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	1	-9.0684
chr10	127523242	127523433	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr7	51505224	51505304	snoRNA	ENSMUSG00000080503_Snord88c	.	ENSMUSG00000080503	ProperStrand	793	1	-3.6393
chr17	35299507	35299576	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	chr12	110887828	110887895	snoRNA	ENSMUSG00000084549_SNORD113	.	ENSMUSG00000084549	ProperStrand	196	1	-2.5997
chr14	21204592	21204645	protein_coding	Dnajc9	exon	ENSMUSG00000021811	ProperStrand	3	chr1	102076760	102076790	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	1	-15.8058
chr6	143155361	143155461	protein_coding	Etnk1	utr3	ENSMUSG00000030275	ProperStrand	61	chr7	29136575	29136652	snoRNA	ENSMUSG00000077711_SNORA40	.	ENSMUSG00000077711	ProperStrand	16704	1	-2.3370
chr2	9985901	9985917	protein_coding	Atp5c1	exon	ENSMUSG00000025781	ProperStrand	138	chr2	101524173	101524205	protein_coding	Traf6	intron	ENSMUSG00000027164	ProperStrand	24	1	-13.4983
chr2	79132657	79132674	protein_coding-noncoding	Itga4	utr5	ENSMUSG00000027009	NonProperStrand	118	chr14	76247711	76247841	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	1	-2.9296
chr3	75695818	75696729	protein_coding	Golim4	exon	ENSMUSG00000034109	ProperStrand	5	chr7	117166806	117166856	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	1	-9.9106
chr3	69124501	69124568	protein_coding	Ppm1l	intron	ENSMUSG00000027784	ProperStrand	32	chr1	9932550	9932577	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-8.9922
chr10	127947354	127947408	protein_coding	Esyt1	utr3	ENSMUSG00000025366	ProperStrand	31	chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	2	-16.0908
chr7	52084577	52084677	protein_coding	Nup62	exon	ENSMUSG00000043858	ProperStrand	47	chr11	97642952	97642969	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-2.8973
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr12	82317769	82317785	protein_coding	Slc8a3	exon	ENSMUSG00000079055	ProperStrand	126	1	-6.3238
chr10	80012700	80012801	protein_coding	Rexo1	exon	ENSMUSG00000047417	ProperStrand	46	chr9	120039585	120039681	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	2	-6.4429
chr1	66883543	66883576	protein_coding	Acadl	exon	ENSMUSG00000026003	ProperStrand	4	chr16	23110950	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-8.2228
chr2	42523995	42524075	LINE	Lx6	L1	chr2Lx642523834	NonProperStrand	1	chr2	42358641	42358731	protein_coding	Lrp1b	intron	ENSMUSG00000049252	NonProperStrand	39	1	-inf
chr11	97642952	97643056	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	chr12	110887828	110887895	snoRNA	ENSMUSG00000084549_SNORD113	.	ENSMUSG00000084549	ProperStrand	196	4	-3.8195
chr8	126553909	126553999	protein_coding	Urb2	exon	ENSMUSG00000031976	ProperStrand	64	chr2	132131410	132131476	protein_coding	Cds2	utr3	ENSMUSG00000058793	ProperStrand	47	2	-inf
chr14	80262508	80262524	lincRNA	Gm6999	intron	ENSMUSG00000075495	ProperStrand	265	chr1	162967490	162967553	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	2	-2.1014
chr10	86154426	86154474	protein_coding	Hsp90b1	exon	ENSMUSG00000020048	ProperStrand	396	chr9	44807282	44807298	protein_coding	Cd3e	utr3	ENSMUSG00000032093	NonProperStrand	1	1	-inf
chr11	106362671	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	chr17	35088973	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-0.8166
chr13	101252924	101252972	protein_coding	Gtf2h2	exon	ENSMUSG00000021639	ProperStrand	7	chr8	114210443	114210461	protein_coding	Ctrb1	utr3	ENSMUSG00000031957	NonProperStrand	2	1	-inf
chr15	101914788	101921898	protein_coding	Eif4b	exon	ENSMUSG00000058655	ProperStrand	484	chr9	15119646	15119968	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	10	-6.8261
chr7	117189863	117189932	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	chr18	75160707	75160776	snoRNA	ENSMUSG00000064871_Snord58b	.	ENSMUSG00000064871	ProperStrand	471	4	-8.5726
chr6	134097815	134097831	protein_coding	Etv6	intron	ENSMUSG00000030199	NonProperStrand	77	chr19	8963027	8963086	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-1.8697
chr13	99611364	99611437	protein_coding	Tnpo1	utr3	ENSMUSG00000009470	ProperStrand	56	chr2	26494708	26494758	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.2316
chr5	33637767	33637847	lincRNA	Gm20465	intron	ENSMUSG00000092275	NonProperStrand	1	chr5	67388349	67388439	protein_coding	Limch1	exon	ENSMUSG00000037736	NonProperStrand	10	1	-inf
chr7	148636948	148637142	protein_coding	Rplp2	exon	ENSMUSG00000025508	ProperStrand	106	chr4	131865859	131865929	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	3	-3.1353
chr7	148633579	148633818	protein_coding	Rplp2	utr5	ENSMUSG00000025508	ProperStrand	106	chr19	8799830	8799887	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	3	-9.4427
chr1	193583908	193583998	protein_coding	Lpgat1	exon	ENSMUSG00000026623	ProperStrand	31	chr19	8798484	8798553	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	17	-19.0066
chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	chr11	97641516	97641575	protein_coding	Rpl23	intron	ENSMUSG00000071415	ProperStrand	920	1	-3.6066
chr7	117129663	117129743	protein_coding	Tmem41b	utr5	ENSMUSG00000047554	ProperStrand	7	chr5	92485086	92485176	snoRNA	ENSMUSG00000088712_SCARNA23	.	ENSMUSG00000088712	ProperStrand	590	2	-20.2049
chr15	82645033	82645053	protein_coding	Tcf20	intron	ENSMUSG00000041852	ProperStrand	658	chr5	112865460	112865478	protein_coding	Sez6l	exon	ENSMUSG00000058153	ProperStrand	81	1	-7.9224
chr7	106988009	106988089	protein_coding	Spcs2	utr3	ENSMUSG00000035227	ProperStrand	17	chr7	148634754	148634844	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-6.4539
chr6	142979301	142984756	protein_coding	5730419I09Rik	exon	ENSMUSG00000030279	ProperStrand	81	chr3	123210854	123210984	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-2.9714
chr12	114290175	114290191	protein_coding	Pacs2	intron	ENSMUSG00000021143	NonProperStrand	302	chr17	6943334	6943377	protein_coding	Ezr	utr3	ENSMUSG00000052397	ProperStrand	126	1	-8.5886
chr14	31827477	31827546	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	chr7	118219574	118219627	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	10	-4.9063
chr8	116519176	116519256	LINE	L1_Mur3	L1	chr8L1_Mur3116519151	NonProperStrand	1	chr8	116518779	116518869	Simple_repeat	(CATA)n	Simple_repeat	chr8(CATA)n116518799	NonProperStrand	1	1	-inf
chrX	72214248	72214264	protein_coding-noncoding	Gab3	utr3	ENSMUSG00000032750	ProperStrand	420	chr15	76734863	76734977	protein_coding	Rpl8	exon	ENSMUSG00000003970	ProperStrand	191	1	-7.1076
chr3	89009743	89009759	protein_coding	Gba	exon	ENSMUSG00000028048	NonProperStrand	88	chr1	162965538	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-2.5971
chr10	18393547	18393563	protein_coding	D10Bwg1379e	intron	ENSMUSG00000019852	NonProperStrand	120	chr17	13112530	13112551	snoRNA	ENSMUSG00000065105_SNORA29	.	ENSMUSG00000065105	ProperStrand	4924	1	-3.2843
chr17	45797722	45797739	protein_coding	Tmem63b	utr3	ENSMUSG00000036026	ProperStrand	93	chr7	62499546	62499568	protein_coding	Luzp2	intron	ENSMUSG00000063297	ProperStrand	4	1	-17.9274
chr10	80640548	80645170	protein_coding	Eef2	exon	ENSMUSG00000034994	ProperStrand	2244	chr1	162965980	162966043	snoRNA	ENSMUSG00000080463_SNORD75	.	ENSMUSG00000080463	ProperStrand	8292	11	-1.3743
chr15	31405538	31408117	protein_coding	March6	exon	ENSMUSG00000039100	ProperStrand	94	chr1	87983941	87983997	snoRNA	ENSMUSG00000077274_SNORA26	.	ENSMUSG00000077274	ProperStrand	361	2	-13.9949
chr18	83171224	83171267	protein_coding	Zfp516	utr3	ENSMUSG00000058881	ProperStrand	25	chr3	68889152	68889234	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	ProperStrand	10028	1	-4.9136
chr16	28929727	28929745	protein_coding	1600021P15Rik	exon	ENSMUSG00000051065	ProperStrand	6	chr16	23110828	23110959	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-3.7876
chr17	88983238	88983292	protein_coding	Klraq1	exon	ENSMUSG00000034709	ProperStrand	6	chr1	182261182	182261200	protein_coding	Itpkb	intron	ENSMUSG00000038855	ProperStrand	9	1	-18.9485
chr4	46165905	46168629	protein_coding	Ncbp1	exon	ENSMUSG00000028330	ProperStrand	21	chr8	98270016	98270054	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-7.6335
chr11	70340945	70341002	protein_coding	Psmb6	exon	ENSMUSG00000018286	ProperStrand	11	chr7	150717333	150717423	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-8.9274
chr4	136884668	136884779	protein_coding	Cdc42	exon	ENSMUSG00000006699	ProperStrand	38	chr19	17900101	17900118	snoRNA	ENSMUSG00000089540_snoU13	.	ENSMUSG00000089540	ProperStrand	99	1	-13.2302
chr18	38747585	38747635	protein_coding	Spry4	utr3	ENSMUSG00000024427	ProperStrand	24	chr15	34370543	34370643	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	2	-8.7463
chr8	126423326	126426504	protein_coding	Nup133	exon	ENSMUSG00000039509	ProperStrand	59	chr11	69481385	69481465	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-3.2310
chr13	44918772	45006587	protein_coding	Jarid2	exon	ENSMUSG00000038518	ProperStrand	372	chr16	23110900	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	20	-2.4022
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr15	32625876	32625894	protein_coding	Sema5a	utr3	ENSMUSG00000022231	NonProperStrand	7	1	-8.8025
chr13	101414969	101415012	protein_coding	Rad17	exon	ENSMUSG00000021635	ProperStrand	8	chr17	35087894	35087932	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	2	-14.8925
chr10	80781931	80781970	protein_coding	Pip5k1c	utr3	ENSMUSG00000034902	ProperStrand	26	chr14	37875053	37875069	protein_coding	Lrit1	exon	ENSMUSG00000041044	NonProperStrand	11	1	-18.3399
chr7	17005592	17005646	protein_coding	Zc3h4	exon	ENSMUSG00000059273	ProperStrand	95	chr19	8798740	8798815	snoRNA	ENSMUSG00000065392_SNORD26	.	ENSMUSG00000065392	ProperStrand	4385	1	-3.9276
chr10	80860700	80860717	protein_coding	Nfic	utr3	ENSMUSG00000055053	ProperStrand	69	chr7	116663633	116663711	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.2753
chr12	88768882	88768962	protein_coding	Alkbh1	utr3	ENSMUSG00000079036	ProperStrand	70	chr11	6428077	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	7	-19.7066
chr19	29703093	29703193	protein_coding	Ermp1	exon	ENSMUSG00000046324	ProperStrand	103	chr11	97642952	97643088	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	5	-8.5200
chr7	111189224	111189240	processed_transcript	4930516K23Rik	.	ENSMUSG00000090219	ProperStrand	4	chr19	10703020	10703635	protein_coding	Ddb1	utr3	ENSMUSG00000024740	ProperStrand	304	1	-15.7366
chr18	63156653	63156669	protein_coding	Napg	utr3	ENSMUSG00000024581	NonProperStrand	2	chr3	85942730	85942780	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	1	-17.3223
chr2	116069652	116069732	LINE	Lx3_Mus	L1	chr2Lx3_Mus116069629	NonProperStrand	1	chrX	12196131	12196221	LINE	Lx3B	L1	chrXLx3B12195396	NonProperStrand	1	1	-inf
chr11	3102649	3102665	protein_coding	Eif4enif1	intron	ENSMUSG00000020454	ProperStrand	575	chr9	42922173	42922224	protein_coding	Tmem136	intron	ENSMUSG00000048503	ProperStrand	5	1	-13.9543
chr17	33536639	33536719	LINE	L1_Mus2	L1	chr17L1_Mus233536538	NonProperStrand	1	chr2	57945966	57946056	LINE	L1_Mus2	L1	chr2L1_Mus257945408	NonProperStrand	1	1	-inf
chr5	108336363	108336490	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	chr1	9932549	9932620	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	2	-1.0350
chr8	125611289	125611320	protein_coding	Spg7	exon	ENSMUSG00000000738	ProperStrand	40	chr16	23110911	23110960	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-1.4886
chr4	137311098	137311579	protein_coding	Alpl	exon	ENSMUSG00000028766	ProperStrand	80	chr1	59539683	59539700	protein_coding	Fzd7	utr5	ENSMUSG00000041075	ProperStrand	373	1	-9.0760
chr11	97697904	97697957	protein_coding	Lasp1	utr3	ENSMUSG00000038366	ProperStrand	65	chr14	76247711	76247773	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	2	-6.7563
chr17	45705246	45705346	protein_coding	Hsp90ab1	exon	ENSMUSG00000023944	ProperStrand	1627	chr1	135557858	135557881	protein_coding	Zc3h11a	utr5	ENSMUSG00000026464	ProperStrand	102	1	-5.6850
chr1	182868252	182868318	protein_coding	Lefty1	utr3	ENSMUSG00000038793	ProperStrand	28	chr8	129468781	129468871	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-5.8992
chr12	107449616	107449706	LINE	L1MB1	L1	chr12L1MB1107449396	NonProperStrand	1	chr15	66936407	66936497	protein_coding	St3gal1	utr3	ENSMUSG00000013846	NonProperStrand	4	1	-inf
chr17	46933283	46933368	lincRNA	Gm16736	intron	ENSMUSG00000086673	NonProperStrand	2	chr10	110918549	110918639	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	2	-inf
chrX	101417987	101418077	LINE	Lx7	L1	chrXLx7101417692	ProperStrand	2	chrX	102577470	102577550	lincRNA	5330434G04Rik	intron	ENSMUSG00000087620	ProperStrand	29	2	-inf
chr5	74489280	74489329	processed_transcript	2700023E23Rik	.	ENSMUSG00000053656	ProperStrand	2866	chr10	76551673	76558807	protein_coding	Col18a1	exon	ENSMUSG00000001435	ProperStrand	287	1	-2.6961
chr9	8222088	8222178	protein_coding	1700128F08Rik	exon	ENSMUSG00000031998	ProperStrand	6	chr14	76247754	76247835	snoRNA	ENSMUSG00000065147_Snora31	.	ENSMUSG00000065147	ProperStrand	6108	6	-inf
chr9	103362422	103362440	protein_coding	Bfsp2	intron	ENSMUSG00000032556	ProperStrand	2	chr16	23111708	23111760	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-8.9529
chr15	52944504	52944523	protein_coding	Ext1	intron	ENSMUSG00000061731	ProperStrand	24	chr16	23111758	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-11.9057
chr1	36990892	36990909	protein_coding	Tmem131	intron	ENSMUSG00000026116	ProperStrand	129	chr9	15119642	15119697	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.4080
chr13	70789437	70789456	LINE	L1MC1	L1	chr13L1MC170789404	ProperStrand	1	chr16	23110967	23110998	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-inf
chr11	76486514	76486530	protein_coding	Bhlha9	exon	ENSMUSG00000044243	NonProperStrand	1	chrX	34622993	34623026	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-inf
chr8	66704297	66704313	LTR	MTD	MaLR	chr8MTD66704270	ProperStrand	12	chr8	117323535	117323565	protein_coding	Wwox	intron	ENSMUSG00000004637	ProperStrand	41	1	-17.4698
chr19	3659372	3659413	protein_coding	Lrp5	exon	ENSMUSG00000024913	ProperStrand	145	chr1	162967491	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	5	-9.7014
chr14	66093252	66093268	LTR	MLT1A1	MaLR	chr14MLT1A166093179	ProperStrand	31	chr16	23110906	23110957	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0062
chr3	156224612	156224628	lincRNA	4930570G19Rik	exon	ENSMUSG00000085084	ProperStrand	326	chr13	51246730	51246748	protein_coding	Spin1	utr3	ENSMUSG00000021395	NonProperStrand	5	1	-15.0976
chr15	76735341	76735374	protein_coding	Rpl8	exon	ENSMUSG00000003970	ProperStrand	191	chr17	35087894	35087942	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-3.0294
chr4	95690373	95690409	protein_coding	Hook1	utr3	ENSMUSG00000028572	ProperStrand	49	chr19	8799831	8799896	snoRNA	ENSMUSG00000065782_SNORD30	.	ENSMUSG00000065782	ProperStrand	4064	3	-12.5034
chr16	15904344	15912628	protein_coding	2310008H04Rik	exon	ENSMUSG00000041974	ProperStrand	30	chr18	33954830	33954930	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	5	-18.8302
chr2	121034811	121034901	protein_coding	Trp53bp1	exon	ENSMUSG00000043909	ProperStrand	45	chr10	90581056	90581136	snoRNA	ENSMUSG00000077167_SNORA53	.	ENSMUSG00000077167	ProperStrand	4371	1	-5.3660
chr5	20300157	20300247	protein_coding	Phtf2	exon	ENSMUSG00000039987	ProperStrand	9	chr19	8798484	8798551	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	1	-9.0452
chr3	137529044	137529094	protein_coding	H2afz	exon	ENSMUSG00000037894	ProperStrand	72	chr4	131908687	131908753	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	6	-8.0309
chr8	125006049	125006087	protein_coding	Fam38a	exon	ENSMUSG00000014444	ProperStrand	132	chr8	73292188	73292256	protein_coding	Pik3r2	utr3	ENSMUSG00000031834	ProperStrand	22	2	-19.3768
chr4	73918783	73918856	protein_coding	Kdm4c	intron	ENSMUSG00000028397	ProperStrand	36	chr8	63994110	63994683	protein_coding	Palld	exon	ENSMUSG00000058056	ProperStrand	39	5	-19.3758
chr8	73200453	73201724	protein_coding	Lsm4	exon	ENSMUSG00000031848	ProperStrand	19	chr11	69481347	69481427	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	1	-5.3947
chr2	14994820	14996590	protein_coding	Arl5b	exon	ENSMUSG00000017418	ProperStrand	55	chrX	84483702	84483721	protein_coding	Il1rapl1	intron	ENSMUSG00000052372	NonProperStrand	755	1	-8.4232
chr18	75161127	75161173	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	chr18	35716684	35716884	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	8	-2.7628
chr4	40208331	40208431	protein_coding	Topors	exon	ENSMUSG00000036822	ProperStrand	40	chr15	79913288	79913348	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-4.3555
chr7	119934438	119934472	protein_coding	Tead1	intron	ENSMUSG00000055320	ProperStrand	217	chr9	15118283	15118318	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-1.3378
chrX	106069663	106069687	lincRNA	2810403D21Rik	exon	ENSMUSG00000086629	ProperStrand	1	chr2	158182210	158182278	snoRNA	ENSMUSG00000065362_SNORA71	.	ENSMUSG00000065362	NonProperStrand	8	1	-inf
chr2	150735319	150735339	protein_coding	Gins1	utr5	ENSMUSG00000027454	ProperStrand	51	chr5	145532270	145532340	protein_coding	Trrap	intron	ENSMUSG00000045482	ProperStrand	399	1	-9.8454
chr6	82742190	82742270	LINE	Lx2B	L1	chr6Lx2B82742184	NonProperStrand	1	chr1	131724219	131724309	protein_coding	Thsd7b	intron	ENSMUSG00000042581	ProperStrand	13	1	-inf
chr7	52400324	52400855	protein_coding	Aldh16a1	exon	ENSMUSG00000007833	ProperStrand	27	chr1	9536478	9536558	protein_coding	Rrs1	exon	ENSMUSG00000061024	ProperStrand	18	1	-17.3109
chr15	79908929	79909015	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	chr3	88497904	88497981	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	2	-1.3263
chr17	5313883	5313963	protein_coding	Arid1b	exon	ENSMUSG00000069729	ProperStrand	28	chr15	79908929	79909019	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-6.9827
chr2	90235286	90235344	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr2	15890698	15890717	Other	RMER1B	Other	chr2RMER1B15890127	ProperStrand	1	1	-inf
chr12	33638594	33638614	lincRNA	4933406C10Rik	exon	ENSMUSG00000086543	ProperStrand	52	chr8	59991434	59991450	protein_coding	Hmgb2	exon	ENSMUSG00000054717	NonProperStrand	96	1	-12.6589
chr13	24567365	24567436	protein_coding	Cmah	utr3	ENSMUSG00000016756	NonProperStrand	53	chr14	61398407	61398423	protein_coding	C1qtnf9	exon	ENSMUSG00000071347	ProperStrand	187	1	-11.2829
chr15	98663200	98692958	protein_coding	Mll2	exon	ENSMUSG00000048154	ProperStrand	170	chr2	26493366	26493466	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	2	-3.4936
chr10	80641700	80641758	snoRNA	ENSMUSG00000064441_Snord37	.	ENSMUSG00000064441	ProperStrand	1075	chr12	110923174	110923232	snoRNA	ENSMUSG00000084487_SNORD113	.	ENSMUSG00000084487	ProperStrand	183	1	-5.3515
chr2	144087382	144087463	snoRNA	ENSMUSG00000065725_SNORA70	.	ENSMUSG00000065725	ProperStrand	1787	chr17	35089181	35089210	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	5	-2.7080
chr12	56451035	56451125	protein_coding	1110008L16Rik	intron	ENSMUSG00000021023	ProperStrand	20	chr10	127523356	127523436	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	1	-10.8897
chr11	93173943	93173960	protein_coding	Car10	intron	ENSMUSG00000056158	ProperStrand	25	chr17	36246117	36246133	pseudogene	C920025E04Rik	.	ENSMUSG00000073405	ProperStrand	3	1	-inf
chr2	125833016	125833033	protein_coding	4930525F21Rik	exon	ENSMUSG00000027209	ProperStrand	1	chr13	76341035	76341055	protein_coding	Fam81b	intron	ENSMUSG00000078966	NonProperStrand	220	1	-inf
chr5	150059554	150059606	misc_RNA	AC122546.1	.	ENSMUSG00000092674	ProperStrand	2	chr18	33954817	33954907	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-10.8123
chr4	141484387	141485449	protein_coding	Fhad1	exon	ENSMUSG00000051435	NonProperStrand	8	chr9	15130904	15130986	snoRNA	ENSMUSG00000077394_snoU2_19	.	ENSMUSG00000077394	ProperStrand	96	2	-18.7081
chr4	122970425	122970525	snoRNA	ENSMUSG00000065778_SNORA55	.	ENSMUSG00000065778	ProperStrand	1150	chr2	18508668	18508717	tRNA	tRNA1947-AsnGTT	.	1224987	ProperStrand	179	1	-5.2640
chr1	72301655	72301769	snRNA	ENSMUSG00000093333_AC120136.3	.	ENSMUSG00000093333	ProperStrand	68	chr16	23110940	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	6	-3.8424
chr5	74968481	74968571	protein_coding	Fip1l1	exon	ENSMUSG00000029227	ProperStrand	102	chr16	23111740	23111820	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-1.1293
chr8	81256141	81256158	protein_coding	Slc10a7	utr3	ENSMUSG00000031684	NonProperStrand	7	chr16	23111759	23111829	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	1	-5.9463
chr4	147514910	147514926	protein_coding	Mad2l2	exon	ENSMUSG00000029003	NonProperStrand	21	chr15	82686567	82686600	protein_coding	Tcf20	exon	ENSMUSG00000041852	ProperStrand	658	1	-10.6452
chr15	10545702	10545792	protein_coding	Rai14	intron	ENSMUSG00000022246	ProperStrand	180	chr5	130295444	130295524	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-3.1801
chr10	41440013	41440046	protein_coding	Cep57l1	intron	ENSMUSG00000019813	ProperStrand	36	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-9.2058
chr10	126535536	126535636	protein_coding	Os9	exon	ENSMUSG00000040462	ProperStrand	72	chr1	162967533	162967568	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	5	-13.7273
chr7	28639835	28639862	protein_coding	Zfp59	exon	ENSMUSG00000078779	ProperStrand	7	chr10	23505192	23505235	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	2	-8.5700
chr15	10393733	10400033	protein_coding	Dnajc21	exon	ENSMUSG00000044224	NonProperStrand	3	chrX	71517838	71517951	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-12.8913
chr15	81625315	81625398	protein_coding	Zc3h7b	utr3	ENSMUSG00000022390	ProperStrand	35	chr1	162965548	162967520	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.2830
chr7	135125240	135125317	protein_coding	Fus	utr3	ENSMUSG00000030795	ProperStrand	162	chr16	23110563	23110582	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-0.9735
chr10	85877514	85877533	protein_coding	Syn3	intron	ENSMUSG00000059602	ProperStrand	17	chr5	115940328	115940383	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	1	-11.2934
chr10	127496140	127496181	protein_coding	Ptges3	utr5	ENSMUSG00000071072	ProperStrand	89	chr4	131866154	131866246	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	3	-7.5431
chr4	44072955	44072971	protein_coding	Gne	exon	ENSMUSG00000028479	NonProperStrand	1474	chr2	146125208	146125228	protein_coding	Ralgapa2	intron	ENSMUSG00000037110	NonProperStrand	184	1	-4.7340
chr15	48504960	48504976	protein_coding	Csmd3	exon	ENSMUSG00000022311	NonProperStrand	25	chr9	40612112	40612136	snoRNA	ENSMUSG00000075924_Snord14d	.	ENSMUSG00000075924	ProperStrand	131	1	-13.5170
chr13	9833552	9833615	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr5	125000210	125000251	protein_coding	Tmed2	utr3	ENSMUSG00000029390	ProperStrand	15	2	-12.4289
chr5	42136455	42136473	Low_complexity	GA-rich	Low_complexity	chr5GA-rich42136449	NonProperStrand	106	chr9	120037930	120038030	snoRNA	ENSMUSG00000065041_SNORA62	.	ENSMUSG00000065041	ProperStrand	4609	1	-3.6317
chrX	98643320	98643397	protein_coding	Nono	utr3	ENSMUSG00000031311	ProperStrand	102	chr7	148634747	148634837	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-3.0126
chr10	59352859	59352881	protein_coding	Dnajb12	exon	ENSMUSG00000020109	ProperStrand	27	chr7	134671389	134671504	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	2	-15.0244
chr11	103662029	103662046	protein_coding	Wnt3	intron	ENSMUSG00000000125	NonProperStrand	22	chr9	15118518	15118585	snoRNA	ENSMUSG00000088929_SNORD5	.	ENSMUSG00000088929	ProperStrand	436	1	-11.3726
chr8	26946520	26950256	protein_coding	Ash2l	exon	ENSMUSG00000031575	ProperStrand	113	chr1	162966833	162966870	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-5.0221
chrX	71260682	71260741	protein_coding	Irak1	utr3	ENSMUSG00000031392	ProperStrand	12	chr9	15118249	15118322	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-6.6107
chr10	114656230	114656313	protein_coding	Tbc1d15	exon	ENSMUSG00000020130	ProperStrand	12	chr5	130295521	130295551	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	1	-8.4807
chr15	78939631	78939647	protein_coding	Micall1	utr5	ENSMUSG00000033039	NonProperStrand	2	chr3	68889133	68889233	snoRNA	ENSMUSG00000089417_snoU90	.	ENSMUSG00000089417	NonProperStrand	26	2	-inf
chr16	84821451	84823035	protein_coding	Jam2	intron	ENSMUSG00000053062	ProperStrand	39	chr2	26494759	26494799	snoRNA	ENSMUSG00000077192_Snora17	.	ENSMUSG00000077192	ProperStrand	10900	1	-3.9010
chr8	72817771	72821796	protein_coding	Ddx49	exon	ENSMUSG00000057788	ProperStrand	68	chr5	130300458	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	5	-10.9742
chr2	127058938	127059028	protein_coding	Snrnp200	exon	ENSMUSG00000003660	ProperStrand	203	chr11	113693681	113693698	protein_coding	Sdk2	exon	ENSMUSG00000041592	NonProperStrand	98	1	-9.8835
chr7	116663605	116663648	protein_coding-noncoding	Rpl27a	utr5	ENSMUSG00000046364	ProperStrand	57	chr5	130295414	130295504	snoRNA	ENSMUSG00000065304_SNORA22	.	ENSMUSG00000065304	ProperStrand	3475	2	-8.7762
chr7	52381324	52381368	protein_coding	Rpl13a	exon	ENSMUSG00000074129	ProperStrand	269	chr6	94776847	94776875	rRNA	5_8S_rRNA	.	ENSMUSG00000088595	ProperStrand	492	1	-6.1221
chr11	68886963	68887063	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	chr12	60774072	60774112	snoRNA	ENSMUSG00000077603_SNORA3	.	ENSMUSG00000077603	ProperStrand	185	1	-2.1372
chr14	51427119	51427219	misc_RNA	AC027184.1	.	ENSMUSG00000092837	NonProperStrand	20	chr16	23110983	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	NonProperStrand	93	1	-14.6517
chr8	87153714	87153757	protein_coding	Cacna1a	intron	ENSMUSG00000034656	ProperStrand	35	chr11	68886942	68887032	snoRNA	ENSMUSG00000064899_Snord118	.	ENSMUSG00000064899	ProperStrand	6200	1	-5.1817
chr8	63789397	63789413	protein_coding	Sh3rf1	intron	ENSMUSG00000031642	ProperStrand	50	chr17	35088969	35089021	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-6.2272
chrX	20002886	20002902	protein_coding	Phf16	utr5	ENSMUSG00000037315	ProperStrand	22	chr17	24857725	24857850	snoRNA	ENSMUSG00000077709_Snora64	.	ENSMUSG00000077709	ProperStrand	17397	1	-4.1130
chr13	101299959	101300049	protein_coding	Ocln	intron	ENSMUSG00000021638	ProperStrand	3	chr11	97642958	97643038	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-8.5513
mmu-miR-5100	5	20	miRNA	mmu-miR-5100	.	mmu-miR-5100	ProperStrand	132	chr3	157576517	157576581	protein_coding	Cth	intron	ENSMUSG00000028179	ProperStrand	14	1	-14.6932
chr5	118376503	118376519	protein_coding	Nos1	exon	ENSMUSG00000029361	NonProperStrand	237	chr17	34853411	34853427	protein_coding	Tnxb	utr3	ENSMUSG00000033327	NonProperStrand	9	1	-14.4452
chr13	68759738	68764669	protein_coding	Adcy2	exon	ENSMUSG00000021536	ProperStrand	237	chr5	121655100	121655152	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-1.4293
chr11	115999916	115999932	protein_coding	Mrpl38	exon	ENSMUSG00000020775	NonProperStrand	65	chr2	89368462	89368478	protein_coding	Olfr1243	exon	ENSMUSG00000075084	NonProperStrand	262	1	-10.1974
chr7	50205976	50206066	LINE	Lx2	L1	chr7Lx250205960	NonProperStrand	1	chr7	50206202	50206282	SINE	B2_Mm2	B2	chr7B2_Mm250206169	NonProperStrand	1	1	-inf
chr5	108336363	108336492	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	chr18	35714145	35716836	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	28	-3.6385
chr2	120012135	120012936	protein_coding	Pla2g4e	exon	ENSMUSG00000050211	NonProperStrand	2	chr9	20693934	20693979	snoRNA	ENSMUSG00000077702_SNORD105	.	ENSMUSG00000077702	ProperStrand	41	1	-inf
chr19	41028023	41028041	protein_coding	Blnk	intron	ENSMUSG00000061132	ProperStrand	3	chr4	131908270	131908327	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-7.2242
chr3	103766705	103766721	protein_coding	Rsbn1	utr3	ENSMUSG00000044098	NonProperStrand	17	chr1	180885279	180885295	protein_coding	Smyd3	utr3	ENSMUSG00000055067	NonProperStrand	190	1	-13.5660
chr9	100966289	100966307	SINE	B4A	B4	chr9B4A100966214	ProperStrand	51	chr8	86535304	86535321	protein_coding	2210011C24Rik	exon	ENSMUSG00000074217	NonProperStrand	153	1	-11.7619
chr6	47738067	47738120	misc_RNA	Y_RNA	.	ENSMUSG00000065701	ProperStrand	129	chr11	5180669	5180685	protein_coding	Znrf3	utr3	ENSMUSG00000041961	NonProperStrand	210	1	-9.2658
chr13	12681882	12681911	snoRNA	ENSMUSG00000065158_SNORA73	.	ENSMUSG00000065158	ProperStrand	10	chr16	38158134	38158224	snoRNA	ENSMUSG00000077530_SNORA17	.	ENSMUSG00000077530	ProperStrand	617	2	-19.8328
chr4	94253569	94253596	protein_coding	Plaa	exon	ENSMUSG00000028577	ProperStrand	40	chr15	79908957	79909019	snoRNA	ENSMUSG00000077734_Snord83b	.	ENSMUSG00000077734	ProperStrand	3095	1	-6.2710
chr4	137505386	137505402	protein_coding	Ece1	exon	ENSMUSG00000057530	ProperStrand	982	chr9	64024525	64024550	snoRNA	ENSMUSG00000065359_SNORD16	.	ENSMUSG00000065359	ProperStrand	712	1	-2.9797
chr18	51449510	51449527	protein_coding	Prr16	intron	ENSMUSG00000073565	NonProperStrand	3	chr15	98350213	98350283	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	NonProperStrand	9	1	-inf
chr9	78326785	78326852	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr2	168010286	168010357	protein_coding	Adnp	exon	ENSMUSG00000051149	ProperStrand	48	4	-19.1443
chr7	123437904	123437980	protein_coding	Plekha7	intron	ENSMUSG00000045659	ProperStrand	66	chr18	35716811	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-2.0141
chr9	59518372	59518399	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	chr15	98356819	98356913	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	1	-1.9898
chr16	8104153	8104233	LTR	MLT1F2	MaLR	chr16MLT1F28104166	ProperStrand	1	chr16	8104299	8104389	SINE	B3	B2	chr16B38104249	ProperStrand	1	1	-inf
chr7	133726663	133726695	protein_coding	Cln3	utr5	ENSMUSG00000030720	ProperStrand	87	chr6	145564547	145564563	protein_coding	Tuba3b	utr5	ENSMUSG00000067338	ProperStrand	152	1	-10.7008
chr13	73652952	73652995	protein_coding	Lpcat1	utr3	ENSMUSG00000021608	ProperStrand	42	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	1	-7.7396
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr19	8798489	8798553	snoRNA	ENSMUSG00000064721_SNORD25	.	ENSMUSG00000064721	ProperStrand	3542	2	-3.1087
chr19	46579894	46579984	protein_coding	Trim8	intron	ENSMUSG00000025034	ProperStrand	29	chr16	23110914	23110994	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-1.0921
mmu-miR-6240	1	20	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr7	29136060	29137209	protein_coding	Rps16	exon	ENSMUSG00000037563	ProperStrand	191	1	-3.6858
chr10	61329160	61330213	protein_coding	Col13a1	exon	ENSMUSG00000058806	ProperStrand	120	chr13	90238585	90238631	snoRNA	ENSMUSG00000088308_snoU109	.	ENSMUSG00000088308	ProperStrand	618	1	-7.2649
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr4	152806422	152806438	protein_coding	Ajap1	exon	ENSMUSG00000039546	ProperStrand	51	1	-8.1203
chr11	45975555	45975572	protein_coding	Nipal4	exon	ENSMUSG00000020411	ProperStrand	2	chr11	6428077	6428154	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	NonProperStrand	91	1	-22.1974
chr2	163977666	163977756	protein_coding	Stk4	utr3	ENSMUSG00000018209	ProperStrand	20	chrX	71517869	71517949	snoRNA	ENSMUSG00000064981_Snora70	.	ENSMUSG00000064981	ProperStrand	1787	1	-8.7528
chr2	145076803	145209254	protein_coding	Slc24a3	intron	ENSMUSG00000063873	NonProperStrand	984	chr3	85942755	85942780	snoRNA	ENSMUSG00000064984_Snord73a	.	ENSMUSG00000064984	ProperStrand	361	1	-4.2206
chr8	125012437	125013071	protein_coding	Fam38a	exon	ENSMUSG00000014444	ProperStrand	132	chr19	8800383	8800463	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-2.1491
chr14	14731050	14731067	protein_coding	Gm281	intron	ENSMUSG00000084902	ProperStrand	23	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.0979
chr12	81209057	81209074	protein_coding	Zfp36l1	utr3	ENSMUSG00000021127	ProperStrand	12	chr9	15118245	15118322	snoRNA	ENSMUSG00000065282_SNORA18	.	ENSMUSG00000065282	ProperStrand	8934	1	-6.6107
chr14	56159296	56159312	protein_coding	Pck2	exon	ENSMUSG00000040618	NonProperStrand	196	chr17	35088957	35089020	snoRNA	ENSMUSG00000092687_AC087117.2	.	ENSMUSG00000092687	ProperStrand	2526	1	-3.6044
chr18	85715439	85715529	LINE	L1MA8	L1	chr18L1MA885715303	ProperStrand	1	chr14	34781279	34781369	protein_coding	Zfp488	utr3	ENSMUSG00000044519	ProperStrand	54	1	-inf
chr7	148634670	148636966	protein_coding	Rplp2	exon	ENSMUSG00000025508	ProperStrand	106	chr5	115597212	115597229	protein_coding	Mlec	utr3	ENSMUSG00000048578	NonProperStrand	25	1	-13.9429
chr6	47738067	47738105	misc_RNA	Y_RNA	.	ENSMUSG00000065701	ProperStrand	129	chr7	116664819	116664926	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.3416
chr1	132115152	132115168	protein_coding	Thsd7b	utr3	ENSMUSG00000042581	NonProperStrand	18	chr5	151755617	151755633	protein_coding	Kl	exon	ENSMUSG00000058488	ProperStrand	976	1	-10.1739
chr15	99240239	99240304	protein_coding	Tmbim6	utr3	ENSMUSG00000023010	ProperStrand	64	chr16	23109067	23109093	snoRNA	ENSMUSG00000088524_Snord2	.	ENSMUSG00000088524	ProperStrand	1230	1	-7.1533
chr4	147257814	147259613	protein_coding	Mfn2	exon	ENSMUSG00000029020	ProperStrand	8	chr7	150717298	150717350	snoRNA	ENSMUSG00000065118_SNORA54	.	ENSMUSG00000065118	ProperStrand	3041	1	-9.5994
chr4	44139834	44139850	protein_coding	Rnf38	utr3	ENSMUSG00000035696	ProperStrand	66	chr17	35089183	35089234	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-5.2993
chr16	5256015	5256031	protein_coding	Fam86	utr5	ENSMUSG00000022544	ProperStrand	231	chr17	39985173	39985209	pseudogene	AY036118	.	ENSMUSG00000045999	NonProperStrand	2444	1	-3.3643
chr7	134276251	134276268	protein_coding-noncoding	Spn	utr3	ENSMUSG00000051457	NonProperStrand	1	chr7	28421172	28421284	protein_coding	Akt2	exon	ENSMUSG00000004056	ProperStrand	100	1	-inf
chr6	90259062	90259078	protein_coding	Chst13	exon	ENSMUSG00000056643	ProperStrand	2	chr16	44216718	44216748	protein_coding	Gm608	exon	ENSMUSG00000068284	ProperStrand	17	1	-inf
chr18	82662186	82662202	protein_coding	Mbp	intron	ENSMUSG00000041607	NonProperStrand	185	chr1	162965531	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-2.6667
chr6	106734427	106740829	protein_coding	Crbn	exon	ENSMUSG00000005362	ProperStrand	7	chr18	35716818	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	2	-10.3984
chr1	75447246	75447262	protein_coding	Accn4	utr5	ENSMUSG00000033007	NonProperStrand	23	chr12	112779148	112779279	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	1	-6.6654
chr16	57391760	57391791	protein_coding	2610528E23Rik	intron	ENSMUSG00000022748	ProperStrand	950	chr2	32818803	32818926	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-0.8077
chr1	121315179	121315198	protein_coding	Inhbb	intron	ENSMUSG00000037035	NonProperStrand	12	chr5	135422085	135422118	protein_coding	Cldn4	exon	ENSMUSG00000047501	ProperStrand	12	1	-19.9071
chr5	31079813	31080399	protein_coding	Dpysl5	exon	ENSMUSG00000029168	ProperStrand	27	chr7	116664819	116664899	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-4.0017
chr11	51781329	51781412	protein_coding	Cdkn2aipnl	exon	ENSMUSG00000020392	ProperStrand	18	chr11	107499143	107499159	protein_coding	Helz	exon	ENSMUSG00000020721	ProperStrand	60	1	-15.7554
chr15	58785814	58785894	protein_coding	Mtss1	intron	ENSMUSG00000022353	ProperStrand	68	chr15	59426575	59426665	protein_coding	Nsmce2	intron	ENSMUSG00000059586	ProperStrand	29	1	-14.5331
chr16	17640376	17641069	protein_coding	Smpd4	exon	ENSMUSG00000005899	ProperStrand	33	chr11	77995186	77995215	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-7.3726
chr9	66289709	66289809	protein_coding	Herc1	exon	ENSMUSG00000038664	ProperStrand	81	chr2	22444823	22444843	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	3	-16.1951
chr17	88077661	88077677	protein_coding	Msh2	exon	ENSMUSG00000024151	ProperStrand	124	chr7	30074411	30074428	protein_coding	Ppp1r14a	exon	ENSMUSG00000037166	NonProperStrand	253	1	-8.9732
chr15	103029921	103030011	protein_coding	Cbx5	utr3	ENSMUSG00000009575	ProperStrand	98	chr11	98878386	98878466	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-5.3232
chr1	137456000	137456062	protein_coding	Nav1	intron	ENSMUSG00000009418	ProperStrand	38	chr11	62417004	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	2	-11.2061
chr1	123343250	123343290	protein_coding	Ccdc93	intron	ENSMUSG00000026339	ProperStrand	14	chr5	5314260	5314277	protein_coding	Cdk14	intron	ENSMUSG00000028926	NonProperStrand	23	1	-18.1755
chr8	18802280	18802296	protein_coding	Mcph1	utr3	ENSMUSG00000039842	NonProperStrand	430	chr13	96374713	96374729	protein_coding	F2r	exon	ENSMUSG00000048376	NonProperStrand	88	1	-8.6021
chr9	47498162	47498180	protein_coding	Cadm1	intron	ENSMUSG00000032076	NonProperStrand	8	chr17	25099872	25099932	protein_coding	Cramp1l	utr3	ENSMUSG00000038002	ProperStrand	22	1	-18.6665
chr4	151767924	151768399	protein_coding	Kcnab2	exon	ENSMUSG00000028931	ProperStrand	22	chr17	35089182	35089229	snoRNA	ENSMUSG00000092678_AC087117.1	.	ENSMUSG00000092678	ProperStrand	3075	1	-7.4817
chr1	24620905	24620971	protein_coding	Gm10925	utr3	ENSMUSG00000090378	ProperStrand	320	chr13	51743663	51743706	snoRNA	ENSMUSG00000064672_SNORA2	.	ENSMUSG00000064672	ProperStrand	1523	4	-11.9580
chr11	78214288	78214306	antisense	Gm11194	.	ENSMUSG00000085747	ProperStrand	35	chr15	82980137	82980188	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	1	-8.2182
chr7	16534823	16534839	protein_coding	Ehd2	utr3	ENSMUSG00000074364	NonProperStrand	197	chr12	17552958	17553030	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	2	-4.9771
chr11	68849393	68849567	protein_coding	1500010J02Rik	exon	ENSMUSG00000020898	ProperStrand	38	chr1	102076729	102076790	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	1	-10.3556
chr9	26440743	26440759	DNA	MER5A	MER1_type	chr9MER5A26440741	ProperStrand	108	chr1	59761636	59761716	snoRNA	ENSMUSG00000089093_Snord11	.	ENSMUSG00000089093	ProperStrand	193	2	-15.4502
chr11	23804535	23804625	SINE	B1_Mus1	Alu	chr11B1_Mus123804533	ProperStrand	1	chr11	23804802	23804892	SINE	B3	B2	chr11B323804711	NonProperStrand	1	1	-inf
chr3	108190244	108190547	protein_coding	Psrc1	exon	ENSMUSG00000068744	ProperStrand	38	chr7	52381719	52381788	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	1	-8.4896
chr1	155287316	155287354	protein_coding	1700012A16Rik	intron	ENSMUSG00000042708	ProperStrand	523	chr1	24621416	24621452	protein_coding	Gm10925	intron	ENSMUSG00000090378	ProperStrand	320	2	-9.2339
chr8	13416895	13416914	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr11	70034039	70034055	protein_coding	Slc16a13	exon	ENSMUSG00000044367	ProperStrand	405	1	-2.8375
chr4	101195620	101195641	protein_coding	Dnajc6	intron	ENSMUSG00000028528	ProperStrand	10	chr7	117189992	117190045	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	1	-6.8419
chr7	17375247	17379046	protein_coding	Slc1a5	exon	ENSMUSG00000001918	ProperStrand	19	chr12	17798082	17798162	protein_coding	Hpcal1	utr3	ENSMUSG00000071379	ProperStrand	51	1	-15.9836
chr9	63868722	63868738	protein_coding	Smad6	exon	ENSMUSG00000036867	NonProperStrand	637	chr8	98269959	98270078	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	2	-2.5786
chrX	99266462	99266478	protein_coding	Rgag4	utr5	ENSMUSG00000049191	ProperStrand	3	chr9	64659389	64659410	protein_coding	Dennd4a	utr5	ENSMUSG00000053641	ProperStrand	537	2	-inf
chr5	103952637	103952654	protein_coding	Ptpn13	exon	ENSMUSG00000034573	ProperStrand	23	chr7	52382777	52382832	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-8.6769
chr15	10504979	10504995	protein_coding	Rai14	exon	ENSMUSG00000022246	ProperStrand	180	chr19	8963026	8963078	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-0.7232
chr10	127522647	127523111	protein_coding	Atp5b	exon	ENSMUSG00000025393	ProperStrand	612	chr2	32818907	32818941	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	1	-1.3690
chrX	98894974	98895074	Simple_repeat	(CAG)n	Simple_repeat	chrX(CAG)n98894928	ProperStrand	13	chr13	24905048	24905126	protein_coding	BC005537	utr3	ENSMUSG00000019132	ProperStrand	11	1	-19.3750
chr1	102076759	102076795	protein_coding	Cntnap5b	intron	ENSMUSG00000067028	NonProperStrand	416	chr1	162966813	162966871	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	2	-4.5775
chr2	70927899	70927915	protein_coding	Dcaf17	exon	ENSMUSG00000041966	NonProperStrand	89	chr1	162966813	162966846	snoRNA	ENSMUSG00000084667_SNORD44	.	ENSMUSG00000084667	ProperStrand	2068	1	-5.4852
chr13	9833561	9833660	LINE	L1Md_T	L1	chr13L1Md_T9831266	ProperStrand	4048	chr1	191058375	191058393	protein_coding	Kcnk2	intron	ENSMUSG00000037624	ProperStrand	56	1	-5.0881
chr5	121658488	121658523	protein_coding	Rpl6	exon	ENSMUSG00000029614	ProperStrand	332	chr11	6428077	6428167	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	5	-4.6640
chr16	35087590	35087610	protein_coding	Ptplb	intron	ENSMUSG00000035376	ProperStrand	17	chr1	145626057	145626125	snoRNA	ENSMUSG00000088323_snoU109	.	ENSMUSG00000088323	ProperStrand	564	1	-11.3867
chr4	41148555	41149311	protein_coding	Ubap2	exon	ENSMUSG00000028433	ProperStrand	292	chr7	117166734	117166824	snoRNA	ENSMUSG00000064600_SNORA13	.	ENSMUSG00000064600	ProperStrand	4351	9	-18.9602
chr19	16294140	16294240	protein_coding	Gnaq	exon	ENSMUSG00000024639	ProperStrand	38	chr6	71791341	71791387	protein_coding	Immt	intron	ENSMUSG00000052337	ProperStrand	48	1	-14.6826
chrX	71192804	71193221	protein_coding	Hcfc1	exon	ENSMUSG00000031386	ProperStrand	424	chr4	131866158	131866238	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	2	-1.3683
chr14	31378775	31378805	protein_coding	Tkt	exon	ENSMUSG00000021957	ProperStrand	160	chr18	35714191	35714290	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	4	-6.9305
chr5	115795691	115795779	protein_coding	Cox6a1	utr3	ENSMUSG00000041697	ProperStrand	38	chr4	131908351	131908441	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.1259
chr13	69767887	69767940	protein_coding	Nsun2	intron	ENSMUSG00000021595	ProperStrand	110	chr2	32818804	32818894	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	3	-10.3434
chr2	132689877	132689895	protein_coding	Crls1	exon	ENSMUSG00000027357	NonProperStrand	2	chr4	131908696	131908796	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-8.0336
chr11	49966251	49968609	protein_coding	Tbc1d9b	exon	ENSMUSG00000036644	ProperStrand	27	chr1	22418607	22418624	protein_coding	Rims1	exon	ENSMUSG00000041670	NonProperStrand	13	1	-17.9550
chr15	82034391	82034496	protein_coding	Srebf2	utr3	ENSMUSG00000022463	ProperStrand	592	chr2	32818896	32818940	snoRNA	ENSMUSG00000065124_Snora65	.	ENSMUSG00000065124	ProperStrand	3098	3	-4.1672
chr4	136205603	136205620	protein_coding	Ephb2	utr3	ENSMUSG00000028664	ProperStrand	21	chr8	122475879	122475895	protein_coding	Usp10	exon	ENSMUSG00000031826	ProperStrand	98	1	-14.4571
chr3	85944541	85944588	snoRNA	ENSMUSG00000064390_Rnu73b	.	ENSMUSG00000064390	ProperStrand	164	chr5	121655053	121655153	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	2	-3.5919
chr2	24263068	24263084	protein_coding	Psd4	utr3	ENSMUSG00000026979	ProperStrand	7	chr11	94422698	94424153	protein_coding	Acsf2	exon	ENSMUSG00000076435	ProperStrand	34	1	-18.2721
chr9	120865083	120866244	protein_coding	Ctnnb1	exon	ENSMUSG00000006932	ProperStrand	214	chr17	35299550	35299599	snoRNA	ENSMUSG00000064853_SNORA38	.	ENSMUSG00000064853	ProperStrand	4440	1	-2.4498
chr5	125504517	125504539	protein_coding	Ncor2	exon	ENSMUSG00000029478	ProperStrand	377	chr11	62416579	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	2	-3.3761
chr3	130961930	130961946	protein_coding	Hadh	intron	ENSMUSG00000027984	NonProperStrand	13	chr6	125136425	125136464	snoRNA	ENSMUSG00000089617_Scarna10	.	ENSMUSG00000089617	ProperStrand	1884	1	-9.5334
chr1	82865086	82865206	protein_coding	Agfg1	intron	ENSMUSG00000026159	ProperStrand	25	chr18	73693166	73693192	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-7.2631
chr9	15120929	15120986	snoRNA	ENSMUSG00000065265_SNORA32	.	ENSMUSG00000065265	ProperStrand	101	chr15	98350146	98350180	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	ProperStrand	4479	2	-6.3710
chr5	143667138	143667277	protein_coding	Actb	exon	ENSMUSG00000029580	ProperStrand	446	chr18	64700008	64700933	protein_coding	Atp8b1	exon	ENSMUSG00000039529	ProperStrand	782	1	-4.2549
chr7	150253563	150253581	protein_coding	Cd81	utr3	ENSMUSG00000037706	NonProperStrand	3	chr1	9932549	9932616	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	2	-inf
chr2	158182156	158182180	lincRNA	9430008C03Rik	intron	ENSMUSG00000085385	ProperStrand	1039	chr9	15130702	15130802	protein_coding	5830418K08Rik	intron	ENSMUSG00000046111	ProperStrand	465	1	-3.6477
chr1	33828651	33828669	protein_coding	Zfp451	intron	ENSMUSG00000042197	NonProperStrand	393	chr1	9932566	9932625	snoRNA	ENSMUSG00000093178_Snord87	.	ENSMUSG00000093178	ProperStrand	981	1	-4.0668
chr2	122266071	122266088	protein_coding	Slc28a2	utr5	ENSMUSG00000027219	ProperStrand	543	chr6	71832550	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	4	-6.5609
chr16	8844079	8844099	protein_coding	1810013L24Rik	intron	ENSMUSG00000022507	ProperStrand	20	chr17	24857486	24857543	protein_coding	Rps2	exon	ENSMUSG00000044533	ProperStrand	373	1	-11.8796
chr3	142351262	142351280	LTR	RLTR1B-int	ERV1	chr3RLTR1B-int142351218	NonProperStrand	949	chr19	38869531	38869547	protein_coding	Noc3l	exon	ENSMUSG00000024999	NonProperStrand	149	1	-5.9946
chr11	115885032	115885048	protein_coding	H3f3b	exon	ENSMUSG00000016559	ProperStrand	76	chr12	106269338	106269445	snoRNA	ENSMUSG00000088789_Scarna13	.	ENSMUSG00000088789	ProperStrand	6212	1	-3.6974
chr4	43505656	43505719	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr11	80415109	80415125	protein_coding	Myo1d	exon	ENSMUSG00000035441	ProperStrand	144	1	-1.6141
chr1	173433197	173433269	protein_coding	B930036N10Rik	utr3	ENSMUSG00000091993	ProperStrand	150	chr10	110918559	110918659	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-1.8728
chr5	31376772	31376987	protein_coding	Cad	exon	ENSMUSG00000013629	ProperStrand	260	chr2	157119950	157120991	protein_coding	Rpn2	exon	ENSMUSG00000027642	ProperStrand	363	1	-6.7863
chr2	12009922	12010002	LINE	L1M2	L1	chr2L1M212009807	ProperStrand	1	chr2	12009658	12009748	SINE	B1_Mur4	Alu	chr2B1_Mur412009673	ProperStrand	1	1	-inf
chr15	94413076	94413166	protein_coding	Twf1	intron	ENSMUSG00000022451	ProperStrand	32	chr16	23111389	23111469	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.2238
chr1	95261511	95263763	protein_coding	Ppp1r7	exon	ENSMUSG00000026275	ProperStrand	44	chr4	131908356	131908453	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	3	-5.3052
chr12	83755423	83755444	protein_coding	Rgs6	intron	ENSMUSG00000021219	ProperStrand	15	chr16	23110828	23110872	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-2.0842
chr14	52948028	52948045	protein_coding	Sall2	utr5	ENSMUSG00000049532	ProperStrand	15	chr18	35714145	35714265	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-6.1300
chr7	123476696	123476753	snoRNA	ENSMUSG00000064741_Snord14a	.	ENSMUSG00000064741	ProperStrand	83	chr4	131908236	131908294	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	2	-1.9540
chr4	43505657	43505681	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr8	64010821	64012181	protein_coding	Palld	exon	ENSMUSG00000058056	ProperStrand	39	1	-3.8628
chr7	87363862	87364083	protein_coding	Sema4b	exon	ENSMUSG00000030539	ProperStrand	54	chr13	30338191	30338207	protein_coding	Mboat1	utr3	ENSMUSG00000038732	NonProperStrand	148	3	-19.8242
chr17	46814084	46814100	lincRNA	Gm16736	intron	ENSMUSG00000086673	ProperStrand	461	chr10	80773488	80773504	protein_coding	Pip5k1c	exon	ENSMUSG00000034902	NonProperStrand	6	1	-13.9852
chr11	75363037	75363053	protein_coding	Slc43a2	intron	ENSMUSG00000038178	NonProperStrand	7	chr5	117724240	117724261	protein_coding	Taok3	utr3	ENSMUSG00000061288	ProperStrand	28	1	-18.7651
chr2	90235291	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr6	18224742	18224761	antisense	Gm15592	.	ENSMUSG00000087389	ProperStrand	1	1	-inf
chr8	13416896	13416913	protein_coding	Grk1	utr3	ENSMUSG00000031450	ProperStrand	1872	chr19	46022236	46022252	protein_coding	9130011E15Rik	intron	ENSMUSG00000039901	ProperStrand	129	1	-4.9581
chr8	108403004	108403069	protein_coding	Nutf2	utr3	ENSMUSG00000008450	ProperStrand	39	chr5	130300434	130300524	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	1	-3.2732
chr18	24363855	24363871	protein_coding	Galnt1	utr5	ENSMUSG00000000420	ProperStrand	158	chr6	142777350	142777367	protein_coding	St8sia1	utr3	ENSMUSG00000030283	ProperStrand	42	1	-12.0896
chr19	38869531	38869547	protein_coding	Noc3l	exon	ENSMUSG00000024999	NonProperStrand	149	chr9	15119651	15119765	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-1.2081
chr2	26294206	26294296	protein_coding	Sec16a	exon	ENSMUSG00000026924	NonProperStrand	5	chr15	98350165	98350255	snoRNA	ENSMUSG00000065336_Snora34	.	ENSMUSG00000065336	NonProperStrand	9	1	-18.9379
chr4	145164117	145164138	protein_coding	Gm13242	intron	ENSMUSG00000058186	ProperStrand	6	chr17	24360315	24360368	protein_coding	Ccnf	utr3	ENSMUSG00000072082	ProperStrand	149	1	-16.1992
chr11	75570499	75578697	protein_coding	Ywhae	exon	ENSMUSG00000020849	ProperStrand	176	chr4	131908686	131908806	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	5	-2.3014
chr5	115940293	115940352	snRNA	ENSMUSG00000075779_U4	.	ENSMUSG00000075779	ProperStrand	591	chr12	16946829	16946919	snoRNA	ENSMUSG00000064620_SNORA32	.	ENSMUSG00000064620	ProperStrand	165	1	-6.7231
chr11	106645265	106645301	protein_coding-noncoding	Ddx5	utr3	ENSMUSG00000020719	ProperStrand	6	chr4	151413545	151413561	protein_coding	Nol9	exon	ENSMUSG00000028948	NonProperStrand	1399	1	-11.7719
chr7	17438566	17438585	protein_coding	Prkd2	intron	ENSMUSG00000041187	ProperStrand	9	chr9	15119634	15119698	snoRNA	ENSMUSG00000064634_SNORA1	.	ENSMUSG00000064634	ProperStrand	14300	1	-6.2797
chr5	145031845	145031935	protein_coding	Bri3	intron	ENSMUSG00000047843	ProperStrand	16	chr2	141809523	141809613	protein_coding	Macrod2	intron	ENSMUSG00000068205	ProperStrand	18	1	-18.5490
chr13	52742450	52742466	protein_coding	Syk	utr3	ENSMUSG00000021457	NonProperStrand	125	chr4	131908723	131908845	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	2	-0.9375
chr1	30860885	30888367	protein_coding	Phf3	exon	ENSMUSG00000048874	ProperStrand	102	chr16	23110960	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	10	-5.7454
chr11	87864751	87864830	protein_coding	Srsf1	utr3	ENSMUSG00000018379	ProperStrand	49	chr15	79913288	79913313	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	3	-9.7044
chrX	49471330	49471347	protein_coding	Gpc4	intron	ENSMUSG00000031119	ProperStrand	8	chr18	35716684	35716706	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-5.9895
chr3	96363356	96363884	protein_coding	Txnip	exon	ENSMUSG00000038393	ProperStrand	172	chr6	115757991	115758081	snoRNA	ENSMUSG00000064563_Snora7a	.	ENSMUSG00000064563	ProperStrand	3096	2	-5.9015
chr15	58770619	58770669	protein_coding	Ndufb9	intron	ENSMUSG00000022354	ProperStrand	13	chr8	125418802	125418819	protein_coding	Ankrd11	exon	ENSMUSG00000035569	ProperStrand	380	1	-12.7327
chr2	120164268	120164424	protein_coding	Vps39	exon	ENSMUSG00000027291	ProperStrand	24	chr19	8963086	8963186	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	5	-16.5529
chr10	116490093	116490155	protein_coding	Cct2	exon	ENSMUSG00000034024	ProperStrand	100	chr7	51505844	51505909	protein_coding	2410002F23Rik	utr5	ENSMUSG00000045411	ProperStrand	628	1	-7.5952
chr7	52260828	52260918	protein_coding	Scaf1	exon	ENSMUSG00000038406	ProperStrand	81	chr9	120039534	120039614	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	18	-inf
chr2	41199972	41199989	protein_coding	Lrp1b	exon	ENSMUSG00000049252	ProperStrand	376	chr7	117189863	117189943	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	2	-4.7819
chr17	34324656	34324673	protein_coding	Psmb9	utr5	ENSMUSG00000024337	ProperStrand	60	chr2	130101987	130102056	snoRNA	ENSMUSG00000065287_SNORA51	.	ENSMUSG00000065287	ProperStrand	3286	1	-5.3566
chr13	104840853	104840869	protein_coding	Nln	exon	ENSMUSG00000021710	ProperStrand	47	chr16	33956457	33956513	protein_coding	Umps	utr3	ENSMUSG00000022814	ProperStrand	20	1	-16.0662
chr11	97490371	97490413	protein_coding	E130012A19Rik	exon	ENSMUSG00000043439	ProperStrand	83	chr15	73416617	73416633	protein_coding	Slc45a4	exon	ENSMUSG00000079020	ProperStrand	127	2	-17.3795
chr9	43428239	43428256	LINE	L3	CR1	chr9L343428068	ProperStrand	2	chr11	77995191	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-13.6212
chr3	135128259	135128318	protein_coding	Ube2d3	utr3	ENSMUSG00000078578	ProperStrand	34	chr2	26768395	26768434	snoRNA	ENSMUSG00000065146_SNORD36	.	ENSMUSG00000065146	ProperStrand	2896	1	-6.7250
chr2	90235304	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr18	60872686	60872703	protein_coding	Ndst1	exon	ENSMUSG00000054008	NonProperStrand	6	2	-14.7648
chr11	46138861	46138877	protein_coding	Itk	utr3	ENSMUSG00000020395	NonProperStrand	3	chr12	57920231	57920249	protein_coding	Slc25a21	intron	ENSMUSG00000035472	ProperStrand	8	1	-20.4785
chrX	103390010	103390073	protein_coding	Pgk1	exon	ENSMUSG00000062070	ProperStrand	484	chr9	120038552	120038642	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	3	-1.1686
chr6	131330334	131330424	snoRNA	ENSMUSG00000065036_SNORA70	.	ENSMUSG00000065036	ProperStrand	408	chr8	98269958	98270037	snoRNA	ENSMUSG00000065089_SNORA46	.	ENSMUSG00000065089	ProperStrand	2987	1	-2.0382
chr8	96880910	96880927	protein_coding	Slc12a3	exon	ENSMUSG00000031766	ProperStrand	16	chr18	74032746	74032764	protein_coding	Mro	intron	ENSMUSG00000064036	NonProperStrand	5	1	-20.1026
chr9	78327100	78327177	protein_coding	Eef1a1	exon	ENSMUSG00000037742	ProperStrand	1990	chr19	29884145	29884190	protein_coding	Ranbp6	exon	ENSMUSG00000074909	ProperStrand	2	1	-13.7788
chr12	106455414	106455514	protein_coding	Tcl1	utr3	ENSMUSG00000041359	ProperStrand	27	chr1	162965554	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-7.9509
chr12	102167082	102167124	protein_coding	Ccdc88c	exon	ENSMUSG00000021182	ProperStrand	151	chr2	52189987	52190003	protein_coding	Neb	utr5	ENSMUSG00000026950	ProperStrand	561	1	-7.0009
chr17	36020844	36020971	protein_coding	Dhx16	exon	ENSMUSG00000024422	ProperStrand	28	chr5	111812088	111812105	protein_coding	Pitpnb	exon	ENSMUSG00000050017	ProperStrand	137	1	-13.1980
chr7	117189931	117189981	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	chr11	83107806	83107903	snoRNA	ENSMUSG00000065715_Snord7	.	ENSMUSG00000065715	ProperStrand	562	4	-1.9114
chr12	60774057	60774110	snoRNA	ENSMUSG00000077603_SNORA3	.	ENSMUSG00000077603	ProperStrand	185	chr3	108357546	108357572	snoRNA	ENSMUSG00000088185_Scarna2	.	ENSMUSG00000088185	ProperStrand	5028	1	-2.4861
chr9	69019826	69019916	protein_coding	Rora	intron	ENSMUSG00000032238	ProperStrand	25	chr5	108336937	108337017	protein_coding	Rpl5	utr3	ENSMUSG00000058558	ProperStrand	235	1	-12.3477
chr18	20844443	20844486	protein_coding	B4galt6	utr3	ENSMUSG00000056124	ProperStrand	31	chr16	23110456	23110546	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-3.6461
chr5	134614687	134614703	protein_coding	Gatsl2	utr3	ENSMUSG00000015944	ProperStrand	8	chr7	116664794	116664923	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	2	-10.6059
chr17	74644326	74644416	protein_coding	Memo1	exon	ENSMUSG00000058704	ProperStrand	3	chr4	131908709	131908789	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-6.9471
chr8	3452130	3452147	protein_coding	Arhgef18	exon	ENSMUSG00000004568	NonProperStrand	11	chr7	52381719	52381797	snoRNA	ENSMUSG00000065818_Snord35a	.	ENSMUSG00000065818	ProperStrand	1061	3	-20.7343
chr3	89354340	89354357	protein_coding	Kcnn3	intron	ENSMUSG00000000794	NonProperStrand	38	chr1	162967115	162967136	snoRNA	ENSMUSG00000077220_SNORD78	.	ENSMUSG00000077220	ProperStrand	608	1	-9.5983
chr17	71990218	71990323	protein_coding	Wdr43	intron	ENSMUSG00000041057	ProperStrand	70	chr7	109242926	109242948	protein_coding	Trpc2	intron	ENSMUSG00000070425	NonProperStrand	26	1	-14.6949
chr9	31193790	31196468	protein_coding	Nfrkb	utr5	ENSMUSG00000042185	ProperStrand	34	chr16	23111448	23111501	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-2.1231
chr3	101078068	101078085	LINE	L2c	L2	chr3L2c101078003	NonProperStrand	1	chr12	110923173	110923231	snoRNA	ENSMUSG00000084487_SNORD113	.	ENSMUSG00000084487	ProperStrand	183	1	-inf
chr13	55448316	55448340	protein_coding	Lman2	exon	ENSMUSG00000021484	ProperStrand	26	chr14	55476645	55476661	protein_coding	Homez	exon	ENSMUSG00000057156	NonProperStrand	127	1	-13.5028
chr1	75484537	75484553	protein_coding	Obsl1	exon	ENSMUSG00000026211	NonProperStrand	192	chr3	97817679	97851651	protein_coding	Notch2	exon	ENSMUSG00000027878	ProperStrand	86	1	-10.2568
chr11	32635308	32635326	protein_coding	Fbxw11	exon	ENSMUSG00000020271	NonProperStrand	31	chr11	69484167	69484468	protein_coding	Eif4a1	exon	ENSMUSG00000059796	ProperStrand	108	1	-13.4678
chr15	25667214	25667232	protein_coding	Myo10	exon	ENSMUSG00000022272	NonProperStrand	8	chr16	23111407	23111507	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-4.8232
chr9	120038588	120040167	protein_coding	Rpsa	exon	ENSMUSG00000032518	ProperStrand	398	chr18	35714199	35714290	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	10	-12.5268
chr5	28716233	28716323	protein_coding	Rbm33	exon	ENSMUSG00000048271	ProperStrand	78	chr5	74489584	74489664	snoRNA	ENSMUSG00000093355_Snora26	.	ENSMUSG00000093355	ProperStrand	7543	1	-3.2949
chr4	131865853	131865985	snoRNA	ENSMUSG00000064604_Snora44	.	ENSMUSG00000064604	ProperStrand	24161	chr2	91436228	91436336	snoRNA	ENSMUSG00000077221_Snord67	.	ENSMUSG00000077221	ProperStrand	1103	16	-1.5340
chr11	3426352	3426368	protein_coding	Smtn	exon	ENSMUSG00000020439	ProperStrand	222	chr6	145169228	145180639	protein_coding	Kras	exon	ENSMUSG00000030265	ProperStrand	3	1	-17.0769
chr19	45409734	45409752	SINE	PB1D10	Alu	chr19PB1D1045409652	ProperStrand	597	chr8	4267337	4267649	protein_coding	Timm44	exon	ENSMUSG00000002949	ProperStrand	63	1	-8.6180
chr4	140136636	140136716	protein_coding	Arhgef10l	intron	ENSMUSG00000040964	NonProperStrand	136	chr15	79320533	79320623	protein_coding	Kcnj4	intron	ENSMUSG00000044216	ProperStrand	5	1	-16.7746
chr12	100017371	100017421	protein_coding	Zc3h14	exon	ENSMUSG00000021012	ProperStrand	27	chr1	162965576	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	2	-7.9509
chr2	22444186	22444662	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	chr7	117189957	117190061	snoRNA	ENSMUSG00000064451_Snora23	.	ENSMUSG00000064451	ProperStrand	9618	6	-1.6148
chr4	140881237	140881295	protein_coding	Epha2	intron	ENSMUSG00000006445	ProperStrand	148	chr1	162967515	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-1.9162
chr11	70467916	70467960	protein_coding	Pfn1	exon	ENSMUSG00000018293	ProperStrand	55	chr16	23110455	23110520	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	3	-6.8549
chr8	23587252	23587286	protein_coding	AI316807	utr5	ENSMUSG00000031534	ProperStrand	2	chr15	88610635	88610726	protein_coding	Zbed4	exon	ENSMUSG00000034333	ProperStrand	19	1	-inf
chr10	126953873	126953931	protein_coding	Ndufa4l2	utr3	ENSMUSG00000040280	ProperStrand	18	chr1	173041632	173041650	tRNA	tRNA710-ValCAC	.	1585453	ProperStrand	206	1	-13.2836
chr15	12802838	12802875	protein_coding	Drosha	intron	ENSMUSG00000022191	ProperStrand	163	chr3	104764495	104764511	protein_coding	Wnt2b	utr5	ENSMUSG00000027840	NonProperStrand	50	1	-11.6752
chr2	51944193	51944257	protein_coding	Rif1	exon	ENSMUSG00000036202	ProperStrand	201	chr10	23505190	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	4	-1.2314
chr10	80568906	80571515	protein_coding	Map2k2	exon	ENSMUSG00000035027	ProperStrand	26	chr17	35087894	35087944	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-6.8539
chr10	75965421	75965452	protein_coding	Mcm3ap	exon	ENSMUSG00000001150	ProperStrand	95	chr7	104492097	104492117	protein_coding	Kctd21	intron	ENSMUSG00000044952	NonProperStrand	1	1	-inf
chr5	42136455	42136473	Low_complexity	GA-rich	Low_complexity	chr5GA-rich42136449	NonProperStrand	106	chr16	5256015	5256031	protein_coding	Fam86	utr5	ENSMUSG00000022544	ProperStrand	231	1	-9.4683
chr3	107134012	107134102	protein_coding	Rbm15	exon	ENSMUSG00000048109	ProperStrand	82	chr4	131865381	131865461	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-3.4223
chr17	24647332	24647388	protein_coding	Traf7	intron	ENSMUSG00000052752	ProperStrand	28	chr11	69483190	69483280	snoRNA	ENSMUSG00000084708_SNORA48	.	ENSMUSG00000084708	ProperStrand	15885	1	-3.8243
chr1	172232712	172232812	protein_coding	Gm7694	exon	ENSMUSG00000079188	ProperStrand	1	chr1	162967515	162967565	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-inf
chr5	66914362	66914387	protein_coding	Apbb2	intron	ENSMUSG00000029207	ProperStrand	25	chrX	34622905	34622968	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-4.8222
chr2	129998667	129998714	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr1	59539683	59539700	protein_coding	Fzd7	utr5	ENSMUSG00000041075	ProperStrand	373	1	-4.5267
chr6	85414776	85414876	protein_coding	Cct7	exon	ENSMUSG00000030007	ProperStrand	173	chr19	8800409	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	7	-13.5513
chr8	46334013	46334106	protein_coding	F11	exon	ENSMUSG00000031645	ProperStrand	21	chr4	131865461	131865513	snoRNA	ENSMUSG00000065097_Snora16a	.	ENSMUSG00000065097	ProperStrand	6687	1	-6.0455
chr13	120251664	120251681	protein_coding	4833420G17Rik	utr5	ENSMUSG00000062822	NonProperStrand	341	chr12	17552949	17553062	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-1.9513
chr15	25685947	25686047	protein_coding	Myo10	intron	ENSMUSG00000022272	ProperStrand	168	chr4	116828379	116828451	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	1	-6.3382
chr7	122612438	122612457	LTR	MTEa	MaLR	chr7MTEa122612326	NonProperStrand	9	chr3	123210854	123210985	snoRNA	ENSMUSG00000092730_Snora24	.	ENSMUSG00000092730	ProperStrand	20014	2	-9.3504
chr2	138993546	138993568	LTR	RMER13A	ERVK	chr2RMER13A138993512	NonProperStrand	1	chr8	24556974	24557074	protein_coding	Sfrp1	utr3	ENSMUSG00000031548	ProperStrand	22	1	-inf
chr9	62643430	62643505	protein_coding	Fem1b	utr3	ENSMUSG00000032244	ProperStrand	111	chr15	79912202	79912873	protein_coding	Rpl3	exon	ENSMUSG00000060036	ProperStrand	8342	1	-2.4954
chr18	38097101	38097183	protein_coding	Hdac3	utr3	ENSMUSG00000024454	ProperStrand	12	chr18	45017935	45019639	protein_coding	Ythdc2	exon	ENSMUSG00000034653	ProperStrand	9	2	-20.8337
chr10	60566025	60566099	protein_coding	Sgpl1	exon	ENSMUSG00000020097	ProperStrand	34	chr16	23110967	23111007	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-0.8923
chr15	12251401	12251426	protein_coding	Golph3	utr5	ENSMUSG00000022200	ProperStrand	35	chr16	35932620	35932636	protein_coding	Dtx3l	exon	ENSMUSG00000049502	ProperStrand	152	1	-12.5362
chrX	90827379	90827395	protein_coding	Pola1	exon	ENSMUSG00000006678	ProperStrand	83	chr1	88252838	88252903	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-5.9998
chr6	122273482	122273572	protein_coding	Phc1	exon	ENSMUSG00000040669	ProperStrand	158	chr14	76372312	76372392	snoRNA	ENSMUSG00000065799_SNORA5	.	ENSMUSG00000065799	ProperStrand	520	1	-7.0611
chr8	26266091	26266191	protein_coding	Tacc1	utr3	ENSMUSG00000065954	ProperStrand	12	chrX	34622906	34622964	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	ProperStrand	10517	1	-6.2898
chr2	158185598	158185666	snoRNA	ENSMUSG00000064405_SNORA71	.	ENSMUSG00000064405	ProperStrand	1842	chr17	24665452	24665497	snoRNA	ENSMUSG00000064768_SNORD60	.	ENSMUSG00000064768	ProperStrand	4077	4	-1.0708
chr1	37414240	37414666	protein_coding	Inpp4a	utr5	ENSMUSG00000026113	ProperStrand	21	chr11	59990567	59990584	protein_coding	Rai1	intron	ENSMUSG00000062115	NonProperStrand	81	1	-14.8438
chr15	45130788	45130809	LINE	L1_Mus2	L1	chr15L1_Mus245129537	NonProperStrand	17	chr2	4974190	4974207	protein_coding	Optn	exon	ENSMUSG00000026672	ProperStrand	451	1	-11.8343
chr4	106754046	106754136	protein_coding-noncoding	Cyb5rl	utr3	ENSMUSG00000028621	NonProperStrand	1	chr4	106754264	106754354	protein_coding	Cyb5rl	intron	ENSMUSG00000028621	NonProperStrand	3	1	-inf
chr8	59992185	59992930	protein_coding	Hmgb2	exon	ENSMUSG00000054717	ProperStrand	184	chr16	23111725	23111830	snoRNA	ENSMUSG00000065208_SNORA4	.	ENSMUSG00000065208	ProperStrand	22160	4	-2.8078
chr7	96437203	96437295	protein_coding	Tmem135	intron	ENSMUSG00000039428	ProperStrand	18	chr18	35716824	35716882	snoRNA	ENSMUSG00000065649_Snora74a	.	ENSMUSG00000065649	ProperStrand	18787	1	-4.3552
chr5	34234246	34234262	protein_coding	Whsc1	utr5	ENSMUSG00000057406	ProperStrand	409	chr7	117189864	117189920	protein_coding	Ipo7	intron	ENSMUSG00000066232	ProperStrand	2121	1	-2.6039
chr2	126383493	126383510	protein_coding	Slc27a2	intron	ENSMUSG00000027359	ProperStrand	17	chr5	121881502	121881553	protein_coding	Naa25	exon	ENSMUSG00000042719	ProperStrand	95	1	-14.9508
chr11	78151301	78151322	protein_coding	Pigs	exon	ENSMUSG00000041958	ProperStrand	31	chr4	131908300	131908356	snoRNA	ENSMUSG00000065353_Snora73b	.	ENSMUSG00000065353	ProperStrand	30526	1	-2.4690
chr18	39934974	39934990	protein_coding	Pabpc2	exon	ENSMUSG00000051732	NonProperStrand	66	chr11	62416582	62416652	snoRNA	ENSMUSG00000064437_Snord49b	.	ENSMUSG00000064437	ProperStrand	3626	1	-4.9815
chr5	143666933	143667028	protein_coding	Actb	exon	ENSMUSG00000029580	ProperStrand	446	chr7	52382752	52382787	snoRNA	ENSMUSG00000065219_Snord32a	.	ENSMUSG00000065219	ProperStrand	1609	1	-2.9340
chr16	11144151	11144231	protein_coding	Zc3h7a	intron	ENSMUSG00000037965	ProperStrand	249	chrX	34622902	34622991	snoRNA	ENSMUSG00000065642_Snora69	.	ENSMUSG00000065642	NonProperStrand	26	1	-12.1513
chr2	90235314	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr9	79915104	79915120	protein_coding	Senp6	utr5	ENSMUSG00000034252	ProperStrand	110	1	-3.3307
chr1	88248602	88248662	snoRNA	ENSMUSG00000064696_SNORD20	.	ENSMUSG00000064696	ProperStrand	89	chr9	64143736	64143826	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-6.9877
chr14	41747526	41747542	protein_coding	Tspan14	exon	ENSMUSG00000037824	NonProperStrand	7	chr3	88715213	88715230	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-11.6453
chr5	34234244	34234262	protein_coding	Whsc1	utr5	ENSMUSG00000057406	ProperStrand	409	chr12	17552948	17553014	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-1.6694
chr9	37440576	37440625	protein_coding	Siae	exon	ENSMUSG00000001942	ProperStrand	5	chr4	106237096	106244049	protein_coding	Dhcr24	exon	ENSMUSG00000034926	ProperStrand	94	3	-18.6014
chr14	73981770	73981814	protein_coding	Sucla2	intron	ENSMUSG00000022110	ProperStrand	20	chr7	134671404	134671504	snoRNA	ENSMUSG00000065259_Snora30	.	ENSMUSG00000065259	ProperStrand	913	1	-10.0911
chr1	88426082	88426350	protein_coding	Ptma	exon	ENSMUSG00000026238	ProperStrand	385	chr11	98878386	98878466	snoRNA	ENSMUSG00000065262_SNORA32	.	ENSMUSG00000065262	ProperStrand	2041	1	-2.7751
chr6	134718386	134718468	protein_coding	Dusp16	intron	ENSMUSG00000030203	ProperStrand	27	chr3	95980313	95980403	snoRNA	ENSMUSG00000084686_SNORA19	.	ENSMUSG00000084686	ProperStrand	1525	2	-13.4930
chr6	51411636	51411667	protein_coding	Hnrnpa2b1	utr3	ENSMUSG00000004980	ProperStrand	166	chr18	35714189	35714289	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	16	-inf
chr3	97817679	97851651	protein_coding	Notch2	exon	ENSMUSG00000027878	ProperStrand	86	chr12	74497390	74497406	protein_coding	D830013O20Rik	utr5	ENSMUSG00000056359	NonProperStrand	1431	1	-6.2705
chr2	90235296	90235343	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chrX	20240149	20240166	protein_coding	Uba1	utr5	ENSMUSG00000001924	ProperStrand	156	1	-2.7092
chr7	106627433	106630271	protein_coding	Rps3	utr3	ENSMUSG00000030744	ProperStrand	159	chr11	6428045	6428168	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	7	-12.8168
chr16	98284344	98284424	LINE	L1_Mus1	L1	chr16L1_Mus198283327	ProperStrand	23	chr18	15535971	15536061	LINE	L1Md_F2	L1	chr18L1Md_F215534671	ProperStrand	1	1	-inf
chr1	20922259	20922275	protein_coding	Paqr8	utr5	ENSMUSG00000025931	NonProperStrand	60	chr9	59518533	59519470	protein_coding	Pkm2	exon	ENSMUSG00000032294	ProperStrand	1296	1	-7.1785
chr10	78576007	78576097	LINE	Lx4B	L1	chr10Lx4B78574863	ProperStrand	1	chr2	17713736	17713826	LINE	Lx3C	L1	chr2Lx3C17713174	ProperStrand	1	1	-inf
chr6	48410411	48410428	protein_coding	Sspo	exon	ENSMUSG00000029797	NonProperStrand	94	chr7	148634701	148634787	snoRNA	ENSMUSG00000064666_Snora52	.	ENSMUSG00000064666	ProperStrand	6745	1	-3.1589
chr8	108298258	108298437	protein_coding	Ranbp10	exon	ENSMUSG00000037415	ProperStrand	13	chr2	26493373	26493463	snoRNA	ENSMUSG00000064858_Snora43	.	ENSMUSG00000064858	ProperStrand	7689	1	-6.7422
chr2	90235296	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr17	81344133	81344150	protein_coding	Tmem178	exon	ENSMUSG00000024245	ProperStrand	67	1	-4.2526
chr12	73648418	73648486	protein_coding	1810048J11Rik	intron	ENSMUSG00000034501	ProperStrand	11	chr19	8963052	8963152	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-5.4574
chr12	110888917	110888947	lincRNA	Rian	exon	ENSMUSG00000091793	ProperStrand	612	chr4	95487233	95487286	protein_coding	Fggy	intron	ENSMUSG00000028573	ProperStrand	44	3	-19.8859
chr18	35783839	35783855	protein_coding	Slc23a1	exon	ENSMUSG00000024354	NonProperStrand	4	chr4	131908689	131908809	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-6.2660
chr13	23665842	23665918	protein_coding	Hist1h2bf	exon	ENSMUSG00000069268	ProperStrand	5	chr4	122968664	122968717	snoRNA	ENSMUSG00000064655_SNORA55	.	ENSMUSG00000064655	ProperStrand	2045	1	-11.4183
chr8	108379527	108379560	protein_coding	Thap11	exon	ENSMUSG00000036442	ProperStrand	34	chr9	103401280	103401296	protein_coding	Tmem108	exon	ENSMUSG00000042757	NonProperStrand	323	1	-11.0865
chr1	20552542	20552558	protein_coding	Pkhd1	exon	ENSMUSG00000043760	NonProperStrand	49	chr11	77995189	77995242	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-6.5835
chr19	10696897	10696930	protein_coding	Ddb1	exon	ENSMUSG00000024740	ProperStrand	304	chr4	70025091	70025127	protein_coding	Cdk5rap2	exon	ENSMUSG00000039298	ProperStrand	810	2	-8.1038
chr14	24251850	24251866	protein_coding	Kcnma1	intron	ENSMUSG00000063142	NonProperStrand	104	chr4	116827120	116827188	snoRNA	ENSMUSG00000065680_Snord38a	.	ENSMUSG00000065680	ProperStrand	1390	1	-5.9538
mmu-miR-6240	2	22	miRNA	mmu-miR-6240	.	mmu-miR-6240	ProperStrand	2480	chr17	23918135	23918151	protein_coding	Flywch2	intron	ENSMUSG00000023911	NonProperStrand	7	1	-10.2930
chr3	41418323	41418347	protein_coding	Phf17	utr3	ENSMUSG00000025764	ProperStrand	101	chr7	116664841	116664924	snoRNA	ENSMUSG00000077575_SNORA3	.	ENSMUSG00000077575	ProperStrand	14988	1	-1.7002
chr13	112416678	112416699	processed_transcript	Gm15286	.	ENSMUSG00000086649	NonProperStrand	16	chr3	32237766	32237799	protein_coding	Zmat3	utr3	ENSMUSG00000027663	ProperStrand	62	1	-15.9581
chr15	81110991	81111009	SINE	ID4	ID	chr15ID481110956	ProperStrand	272	chr14	56249215	56249234	protein_coding	Ipo4	exon	ENSMUSG00000002319	ProperStrand	62	1	-10.2177
chr2	22444597	22444615	pseudogene	Gm13340	.	ENSMUSG00000083563	ProperStrand	958	chr4	116828379	116828451	snoRNA	ENSMUSG00000092680_Snord55	.	ENSMUSG00000092680	ProperStrand	706	3	-7.6983
chr4	80991867	80991903	protein_coding	Mpdz	intron	ENSMUSG00000028402	ProperStrand	21	chr4	128450890	128450990	protein_coding	Zfp362	utr3	ENSMUSG00000028799	ProperStrand	10	1	-19.1688
chr11	120346108	120346127	protein_coding	Mrpl12	intron	ENSMUSG00000039640	ProperStrand	49	chr16	23110895	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	3	-1.9572
chr7	30972439	30972529	protein_coding	Capns1	utr3	ENSMUSG00000001794	ProperStrand	35	chr11	97643010	97643090	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	1	-3.4316
chr2	157834699	157834748	protein_coding	Tti1	exon	ENSMUSG00000027650	ProperStrand	17	chr16	23111394	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-3.3471
chr16	44160168	44160258	protein_coding	Naa50	utr3	ENSMUSG00000022698	ProperStrand	56	chr7	116663655	116663735	snoRNA	ENSMUSG00000065016_Snora3	.	ENSMUSG00000065016	ProperStrand	15317	1	-2.6307
chr14	60866285	60870041	protein_coding	Nupl1	exon	ENSMUSG00000063895	ProperStrand	16	chr19	8800383	8800473	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-6.0928
chr7	150293597	150293613	protein_coding	Kcnq1	exon	ENSMUSG00000009545	NonProperStrand	133	chr18	35714144	35714254	snoRNA	ENSMUSG00000088059_SNORA74	.	ENSMUSG00000088059	ProperStrand	9051	1	-2.0595
chr6	38461895	38461912	protein_coding	Ubn2	utr3	ENSMUSG00000038538	ProperStrand	86	chr12	17552948	17553029	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-4.3973
chr7	140187025	140190563	protein_coding	Ctbp2	exon	ENSMUSG00000030970	ProperStrand	89	chr8	80041277	80041293	protein_coding	Arhgap10	intron	ENSMUSG00000037148	NonProperStrand	15	1	-15.3377
chr2	129998643	129998713	protein_coding-noncoding	Snrpb	utr3	ENSMUSG00000027404	ProperStrand	810	chr1	133818529	133818554	protein_coding	Nucks1	exon	ENSMUSG00000026434	ProperStrand	59	2	-12.9884
chr1	7460450	7460494	LTR	MTC	MaLR	chr1MTC7460325	ProperStrand	3	chr1	162968220	162968290	snoRNA	ENSMUSG00000064968_Snord47	.	ENSMUSG00000064968	ProperStrand	1557	3	-inf
chr11	98297305	98297321	protein_coding	Erbb2	exon	ENSMUSG00000062312	ProperStrand	24	chr15	34370545	34370613	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-5.3037
chr6	67221947	67222008	protein_coding	Serbp1	exon	ENSMUSG00000036371	ProperStrand	261	chr19	8800383	8800483	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	1	-1.1345
chr19	42225881	42225897	protein_coding	Marveld1	utr3	ENSMUSG00000044345	NonProperStrand	112	chr15	79913297	79913350	protein_coding	Rpl3	intron	ENSMUSG00000060036	ProperStrand	8342	1	-2.4801
chr10	62044954	62061492	protein_coding	Ddx21	utr3	ENSMUSG00000020075	ProperStrand	137	chr11	69481351	69481456	snoRNA	ENSMUSG00000065862_SNORA67	.	ENSMUSG00000065862	ProperStrand	10346	2	-3.2932
chr1	82284412	82284447	protein_coding	Irs1	exon	ENSMUSG00000055980	ProperStrand	6	chr15	5068453	5068481	snoRNA	ENSMUSG00000077737_Snord72	.	ENSMUSG00000077737	ProperStrand	2281	1	-10.7955
chr4	115512162	115512178	protein_coding	Mknk1	intron	ENSMUSG00000028708	ProperStrand	4	chr19	11857619	11859888	protein_coding	Stx3	exon	ENSMUSG00000041488	ProperStrand	37	1	-18.9447
chr1	187153153	187153243	protein_coding	Iars2	utr5	ENSMUSG00000026618	ProperStrand	68	chr8	129468780	129468797	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	2	-6.9918
chrX	72779610	72779646	protein_coding	Vbp1	utr3	ENSMUSG00000031197	ProperStrand	6	chr16	23110911	23111006	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	2	-6.6757
chr4	43505897	43505930	misc_RNA	RNase_MRP	.	ENSMUSG00000088088	ProperStrand	11126	chr17	34168202	34168289	protein_coding	Slc39a7	utr5	ENSMUSG00000024327	ProperStrand	39	1	-3.8628
chr6	82694942	82699249	protein_coding	Hk2	exon	ENSMUSG00000000628	ProperStrand	88	chr16	23110532	23110578	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.8342
chr2	165899804	165899884	protein_coding	Sulf2	utr3	ENSMUSG00000006800	ProperStrand	171	chr8	129468743	129468833	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-2.5069
chr1	53409486	53409502	protein_coding	Asnsd1	utr5	ENSMUSG00000026095	NonProperStrand	105	chr9	120038467	120038527	snoRNA	ENSMUSG00000064380_SNORA73	.	ENSMUSG00000064380	ProperStrand	11323	1	-2.0802
chr2	90235301	90235342	LINE	L1Md_F3	L1	chr2L1Md_F390234647	NonProperStrand	5237	chr11	16668677	16668693	protein_coding	Egfr	intron	ENSMUSG00000020122	ProperStrand	13	1	-7.5011
chr12	112779160	112779232	snoRNA	ENSMUSG00000064493_Snora28	.	ENSMUSG00000064493	ProperStrand	4443	chr9	64024976	64024998	snoRNA	ENSMUSG00000064514_SNORD18	.	ENSMUSG00000064514	ProperStrand	482	3	-3.6689
chr13	113689039	113691701	protein_coding	Skiv2l2	exon	ENSMUSG00000016018	ProperStrand	55	chr11	6428065	6428155	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	3	-8.4117
chr11	55208457	55208479	protein_coding	Sparc	utr3	ENSMUSG00000018593	ProperStrand	48	chr5	130300460	130300552	snoRNA	ENSMUSG00000093413_Snora15	.	ENSMUSG00000093413	ProperStrand	15337	4	-10.1512
chr17	66468411	66468427	protein_coding	ORF19	exon	ENSMUSG00000024101	ProperStrand	337	chr18	75161107	75161172	snoRNA	ENSMUSG00000064647_SNORD58	.	ENSMUSG00000064647	ProperStrand	512	3	-12.9723
chr3	57098993	57105448	protein_coding	Tm4sf1	utr5	ENSMUSG00000027800	ProperStrand	451	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-3.3514
chr12	58339545	58339563	protein_coding	Prps1l3	exon	ENSMUSG00000079104	ProperStrand	10	chr4	131908689	131908776	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-4.3231
chr4	138838614	138838630	protein_coding	Capzb	intron	ENSMUSG00000028745	NonProperStrand	21	chr11	62416950	62417023	snoRNA	ENSMUSG00000065734_Snord49a	.	ENSMUSG00000065734	ProperStrand	2309	1	-8.1441
chr1	112485812	112485902	LINE	L1_Rod	L1	chr1L1_Rod112485598	ProperStrand	1	chr1	112485366	112485445	LINE	Lx5	L1	chr1Lx5112484551	ProperStrand	1	1	-inf
chr2	29866842	29869045	protein_coding	Spna2	exon	ENSMUSG00000057738	ProperStrand	222	chr18	33954829	33954909	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	1	-1.3357
chr11	75487282	75487382	protein_coding	Myo1c	utr3	ENSMUSG00000017774	ProperStrand	38	chr8	87080636	87080655	protein_coding	Cacna1a	exon	ENSMUSG00000034656	ProperStrand	35	2	-inf
chr2	126472468	126472484	protein_coding	Gabpb1	exon	ENSMUSG00000027361	ProperStrand	54	chr11	106362640	106362691	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-7.6147
chr13	14063051	14063067	protein_coding	B3galnt2	exon	ENSMUSG00000039242	ProperStrand	6	chr3	88715213	88715231	protein_coding	Gon4l	intron	ENSMUSG00000054199	ProperStrand	1260	1	-11.9801
chr14	31827477	31827542	snoRNA	ENSMUSG00000077212_Snord69	.	ENSMUSG00000077212	ProperStrand	1459	chr3	88497880	88497980	snoRNA	ENSMUSG00000088604_SCARNA15	.	ENSMUSG00000088604	ProperStrand	1124	1	-1.5787
chr13	36373909	36373929	protein_coding	Fars2	intron	ENSMUSG00000021420	ProperStrand	19	chr9	107948642	107948742	protein_coding	Ip6k1	utr3	ENSMUSG00000032594	ProperStrand	61	1	-15.5974
chr5	66390550	66390568	protein_coding	9130230L23Rik	intron	ENSMUSG00000054598	ProperStrand	3	chr4	131908810	131908903	snoRNA	ENSMUSG00000064387_Snora73a	.	ENSMUSG00000064387	ProperStrand	35089	1	-6.9471
chr17	46598088	46598139	protein_coding	Ttbk1	intron	ENSMUSG00000015599	ProperStrand	5	chr9	64143798	64143874	snoRNA	ENSMUSG00000088254_SCARNA14	.	ENSMUSG00000088254	ProperStrand	960	1	-12.9299
chr4	139021282	139021372	protein_coding	Ubr4	exon	ENSMUSG00000066036	ProperStrand	304	chr15	34370545	34370625	snoRNA	ENSMUSG00000065899_SNORA72	.	ENSMUSG00000065899	ProperStrand	8540	1	-0.9547
chr8	87525135	87525238	protein_coding	Hook2	exon	ENSMUSG00000052566	ProperStrand	204	chr12	17552949	17553031	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	1	-2.8118
chr14	122544338	122544413	protein_coding	Tm9sf2	exon	ENSMUSG00000025544	ProperStrand	12	chr11	106362602	106362638	snoRNA	ENSMUSG00000080540_SNORA76	.	ENSMUSG00000080540	ProperStrand	1156	1	-10.6746
chr16	92466320	92466340	protein_coding	Rcan1	utr5	ENSMUSG00000022951	ProperStrand	9	chr19	8800365	8800480	snoRNA	ENSMUSG00000065087_Snord22	.	ENSMUSG00000065087	ProperStrand	8630	3	-16.8823
chr11	57928869	57930948	protein_coding	Cnot8	exon	ENSMUSG00000020515	NonProperStrand	2	chr16	23110853	23110904	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-6.3852
chr7	13516145	13516210	protein_coding	2310014L17Rik	utr3	ENSMUSG00000033967	ProperStrand	612	chr7	118219574	118219701	snoRNA	ENSMUSG00000088948_snoU97	.	ENSMUSG00000088948	ProperStrand	6113	8	-8.6816
chr6	48410411	48410428	protein_coding	Sspo	exon	ENSMUSG00000029797	NonProperStrand	94	chr9	15119287	15119370	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	2	-7.0952
chr7	53312102	53312509	protein_coding	Nomo1	exon	ENSMUSG00000030835	ProperStrand	85	chr7	134337992	134338008	protein_coding	Cd2bp2	exon	ENSMUSG00000042502	ProperStrand	73	1	-12.2189
chr15	89378596	89378644	protein_coding	Shank3	exon	ENSMUSG00000022623	ProperStrand	19	chr3	89009743	89009759	protein_coding	Gba	exon	ENSMUSG00000028048	NonProperStrand	88	1	-14.8697
chr9	57385425	57385441	protein_coding	2310046O06Rik	utr5	ENSMUSG00000032305	ProperStrand	135	chr16	23110454	23110525	snoRNA	ENSMUSG00000064880_SNORA63	.	ENSMUSG00000064880	ProperStrand	15774	1	-1.2088
chr19	16435158	16435252	protein_coding	Gnaq	intron	ENSMUSG00000024639	ProperStrand	38	chr1	44037236	44038586	protein_coding	Tpp2	exon	ENSMUSG00000041763	ProperStrand	22	1	-16.2903
chr1	71341491	71341508	protein_coding	Abca12	exon	ENSMUSG00000050296	NonProperStrand	143	chr15	82980083	82980173	snRNA	ENSMUSG00000065176_U12	.	ENSMUSG00000065176	ProperStrand	1322	4	-16.6101
chr18	46401184	46401274	protein_coding	Pggt1b	exon	ENSMUSG00000024477	ProperStrand	3	chr9	120039543	120039623	snoRNA	ENSMUSG00000064925_Snora62	.	ENSMUSG00000064925	ProperStrand	9691	1	-9.5119
chr18	25535189	25535269	protein_coding	AW554918	intron	ENSMUSG00000033632	ProperStrand	23	chr7	3985636	3985726	protein_coding	Lair1	intron	ENSMUSG00000055541	NonProperStrand	2	1	-inf
chr19	9051907	9052091	protein_coding	Eef1g	exon	ENSMUSG00000071644	ProperStrand	410	chr8	129468786	129468866	snoRNA	ENSMUSG00000065637_SNORA14	.	ENSMUSG00000065637	ProperStrand	5374	1	-1.1636
chr15	102313671	102314638	protein_coding	Pcbp2	exon	ENSMUSG00000056851	ProperStrand	164	chr11	6428093	6428173	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	ProperStrand	10394	1	-1.5222
chr16	23111380	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	NonProperStrand	38	chr11	6428077	6428155	snoRNA	ENSMUSG00000064513_SNORA9	.	ENSMUSG00000064513	NonProperStrand	91	3	-20.8003
chr15	102024255	102024335	LINE	L1MB7	L1	chr15L1MB7102024166	NonProperStrand	1	chr15	102024394	102024484	SINE	B3A	B2	chr15B3A102024408	ProperStrand	1	1	-inf
chr7	89341847	89341863	protein_coding	Sh3gl3	intron	ENSMUSG00000030638	NonProperStrand	11	chr12	17552949	17553071	snoRNA	ENSMUSG00000064427_SNORA42	.	ENSMUSG00000064427	ProperStrand	3774	4	-inf
chr7	31888561	31888577	protein_coding	Hpn	exon	ENSMUSG00000001249	NonProperStrand	20	chr1	162965530	162965597	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-5.3741
chr15	100416584	100416600	protein_coding	Pou6f1	intron	ENSMUSG00000009739	ProperStrand	44	chr5	108334195	108334247	snoRNA	ENSMUSG00000077222_SNORA66	.	ENSMUSG00000077222	ProperStrand	4342	2	-8.8969
chr13	28241703	28241722	protein_coding	Prl5a1	exon	ENSMUSG00000017064	ProperStrand	1	chr2	26812672	26812732	protein_coding	Rexo4	intron	ENSMUSG00000052406	ProperStrand	59	1	-inf
chr12	85334570	85334642	protein_coding	Acot2	utr3	ENSMUSG00000021226	ProperStrand	5	chr16	23110913	23111003	snoRNA	ENSMUSG00000087935_Snora81	.	ENSMUSG00000087935	ProperStrand	80006	1	-4.1656
chr4	151482805	151482845	protein_coding	Plekhg5	exon	ENSMUSG00000039713	ProperStrand	33	chr4	131866154	131866244	snoRNA	ENSMUSG00000064949_Snora61	.	ENSMUSG00000064949	ProperStrand	8018	1	-4.8017
chr1	89839648	89839738	protein_coding	Dgkd	utr3	ENSMUSG00000070738	ProperStrand	39	chr16	23111423	23111503	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-1.9006
chr7	63715333	63715349	protein_coding	Oca2	intron	ENSMUSG00000030450	ProperStrand	6	chr5	108336375	108336414	snoRNA	ENSMUSG00000077426_SNORA66	.	ENSMUSG00000077426	ProperStrand	4206	1	-9.5743
chr6	90612914	90612931	protein_coding	Iqsec1	exon	ENSMUSG00000034312	NonProperStrand	9	chr1	162966189	162966242	snoRNA	ENSMUSG00000064816_SNORD24	.	ENSMUSG00000064816	ProperStrand	1060	1	-11.4532
chr11	100414998	100415014	protein_coding	Ttc25	exon	ENSMUSG00000006784	NonProperStrand	119	chr11	77995188	77995256	snoRNA	ENSMUSG00000077625_Snord4a	.	ENSMUSG00000077625	ProperStrand	2150	1	-4.8478
chr9	15120038	15121088	protein_coding	Taf1d	intron	ENSMUSG00000031939	ProperStrand	363	chr11	97642961	97643078	snoRNA	ENSMUSG00000064901_Snora21	.	ENSMUSG00000064901	ProperStrand	15681	4	-1.7660
chr1	48143122	48143212	LINE	L1Md_F2	L1	chr1L1Md_F248142316	NonProperStrand	1	chr1	48143314	48143393	LINE	L1_Mur3	L1	chr1L1_Mur348143330	NonProperStrand	1	1	-inf
chr2	128468363	128468388	protein_coding	Anapc1	exon	ENSMUSG00000014355	ProperStrand	38	chr1	162967519	162967567	snoRNA	ENSMUSG00000065160_SNORD79	.	ENSMUSG00000065160	ProperStrand	8896	1	-4.3319
chr2	105229192	105229244	protein_coding	Rcn1	exon	ENSMUSG00000005973	ProperStrand	24	chr5	137971840	137971930	protein_coding	Epo	intron	ENSMUSG00000029711	ProperStrand	27	2	-19.8057
chr8	64017614	64028377	protein_coding	Palld	exon	ENSMUSG00000058056	NonProperStrand	125	chr15	98356815	98356899	snoRNA	ENSMUSG00000065939_Snora2b	.	ENSMUSG00000065939	ProperStrand	969	2	-10.1978
chr3	83570497	83570513	protein_coding	Sfrp2	exon	ENSMUSG00000027996	NonProperStrand	32	chr18	33954816	33954949	snoRNA	ENSMUSG00000092819_AC150277.1	.	ENSMUSG00000092819	ProperStrand	8746	5	-18.4484
chr9	114421831	114421885	protein_coding	Trim71	exon	ENSMUSG00000079259	ProperStrand	162	chr5	121655127	121655155	snoRNA	ENSMUSG00000064841_SNORA42	.	ENSMUSG00000064841	ProperStrand	7668	1	-2.0085
chr2	59310862	59310952	SINE	B3	B2	chr2B359310846	NonProperStrand	1	chr7	19191983	19192062	protein_coding	Psg23	utr3	ENSMUSG00000074359	ProperStrand	1	1	-inf
chr18	59192471	59192493	protein_coding	Adamts19	intron	ENSMUSG00000053441	NonProperStrand	3	chr10	110918635	110918686	snoRNA	ENSMUSG00000087819_SNORA48	.	ENSMUSG00000087819	ProperStrand	9022	1	-9.6547
chr5	137748699	137748757	protein_coding	Srrt	utr5	ENSMUSG00000037364	ProperStrand	31	chr18	73693169	73693186	rRNA	n-R5-8s1	.	ENSMUSG00000065922	ProperStrand	3014	1	-6.8310
chr6	71832577	71832686	snoRNA	ENSMUSG00000080465_SNORD94	.	ENSMUSG00000080465	ProperStrand	2882	chr5	23358079	23358095	snoRNA	ENSMUSG00000093321_Snord93	.	ENSMUSG00000093321	ProperStrand	218	1	-3.1716
chr17	46785602	46785629	protein_coding	Mrpl2	exon	ENSMUSG00000002767	ProperStrand	35	chr19	8963082	8963202	snoRNA	ENSMUSG00000070167_SNORA57	.	ENSMUSG00000070167	ProperStrand	17628	1	-3.2191
chr7	19548850	19548867	lincRNA	Gm17370	exon	ENSMUSG00000092034	ProperStrand	8	chr1	88252837	88252905	snoRNA	ENSMUSG00000064823_Snord82	.	ENSMUSG00000064823	ProperStrand	1703	1	-10.7564
chr18	50023840	50023970	protein_coding	Dmxl1	exon	ENSMUSG00000037416	ProperStrand	27	chr10	23505190	23505280	snoRNA	ENSMUSG00000070063_Snora33	.	ENSMUSG00000070063	ProperStrand	34845	3	-6.6517
chr16	36886302	36887328	antisense	4930565N06Rik	.	ENSMUSG00000084834	ProperStrand	27	chr17	35087945	35087963	snoRNA	ENSMUSG00000093009_Snord52	.	ENSMUSG00000093009	ProperStrand	3563	1	-6.7781
chr9	66316316	66316377	protein_coding	Herc1	intron	ENSMUSG00000038664	ProperStrand	81	chr16	23111448	23111504	snoRNA	ENSMUSG00000064382_SNORA63	.	ENSMUSG00000064382	ProperStrand	34198	1	-0.8748
chr3	133130387	133130410	protein_coding	Tet2	exon	ENSMUSG00000040943	ProperStrand	192	chr9	15119298	15119397	snoRNA	ENSMUSG00000065226_SNORA8	.	ENSMUSG00000065226	ProperStrand	3736	2	-5.0751
chr10	40079395	40079412	protein_coding	Cdk19	intron	ENSMUSG00000038481	ProperStrand	34	chr1	162965531	162965594	snoRNA	ENSMUSG00000064440_SNORD74	.	ENSMUSG00000064440	ProperStrand	9921	1	-4.3385